LOCUS       DAGWFR010000001        85397 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.001, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000001 DAGWFR010000000
VERSION     DAGWFR010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 85397)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 85397)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..85397
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.001"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..449)
                     /locus_tag="MOX77_000001"
     CDS             complement(<1..449)
                     /locus_tag="MOX77_000001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase AmiB"
                     /protein_id="HCA3355697.1"
                     /translation="MIYRIKNAVIAALILLCAQAGAASLSDIQVSNGEQQARITLSFI
                     GEPEYAYSQDGKRTVALDIRQTGVIQGLPLQFSGNNLVKTIRAGTPKDAQSLRLLVDL
                     TENGKTEAVKRQNGGNYTVIFTINADVPPPPPPVVAKRVESAPRPTEP"
     gene            complement(466..927)
                     /gene="tsaE"
                     /locus_tag="MOX77_000002"
     CDS             complement(466..927)
                     /gene="tsaE"
                     /locus_tag="MOX77_000002"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HCA3355698.1"
                     /translation="MMNRVIPLPDEQATLDLGQRVANACDGATVIYLYGDLGAGKTTF
                     SRGFLQALGHNGNVKSPTYTLVEPYALDNMMVYHFDLYRLADPEELEFMGIRDYFAND
                     AICLVEWPQQGKGVLPDPDVEIHIDYQAQGREARVSAVSSSGHSLLARLAD"
     gene            complement(899..2446)
                     /gene="nnr"
                     /locus_tag="MOX77_000003"
     CDS             complement(899..2446)
                     /gene="nnr"
                     /locus_tag="MOX77_000003"
                     /EC_number="4.2.1.136"
                     /EC_number="5.1.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional ADP-dependent NAD(P)H-hydrate
                     dehydratase/NAD(P)H-hydrate epimerase"
                     /protein_id="HCA3355699.1"
                     /translation="MMDHNMKKNPVSIPHSIWPADDIKRLERDAADAFGLTLYELMLR
                     AGDAAFRVARDSYPDARHWLVLCGHGNNGGDGYVVARLAQAAGISVTLLAQESDKPLP
                     EEAAQARDAWLNAGGIIHAADIIWPEATDLIIDALLGTGIAQEPRDPVAGLIEQANAH
                     PAPVVAVDIPSGLLAQTGTTPGAVISAAHTVTFIALKPGLLTGKARDVTGILHYDALG
                     LEGWLASQTPPLRRFDATQLGQWLTPRRPTSYKGDHGRLAIIGGDQGTAGAIRMAGEA
                     ALRTGAGLVRVLTRGENIASLLTARPELMVHELTPQSLEESLTWADVVVIGPGLGQQE
                     WGKKALQKVENVRKPMLWDADALNLLAINPDKRHNRVITPHPGEAARLLGCSVAEIES
                     DRLLSAQRLVKRYGGVVVLKGAGTIIAAEHHPLAIIDAGNAGMASGGMGDVLSGIIGA
                     LLGQKFTPYDAACVGCVAHGAAADLLAARYGARGMLATDLFTTLRRIVNPDVIDVNHD
                     ESSNSAT"
     gene            2445..3584
                     /gene="queG"
                     /locus_tag="MOX77_000004"
     CDS             2445..3584
                     /gene="queG"
                     /locus_tag="MOX77_000004"
                     /EC_number="1.17.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA epoxyqueuosine(34) reductase QueG"
                     /protein_id="HCA3355700.1"
                     /translation="MSKPLDLNQLAQNIKQWGLELGFQQVGITDTDLRASEPALQAWL
                     DKQYHGEMAWMARHGMMRARPHELLPGTLRVISVRMNYLPANAAFASTLKDPTLGYVS
                     RYALGRDYHKLLRSRLKKLGEQIQQYCGSLNFRPFVDSAPILERPLAEKAGLGWTGKH
                     SLILNREAGSFFFLGELLIDLPLPVDQPVEEGCGKCVACMTICPTGAIVEPYTVDARR
                     CISYLTIELEGAIPEAFRPLIGNRIYGCDDCQLICPWNRYSQLTDEADFSPRKALHNP
                     DLLELFSWSEAQFLKVTEGSAIRRIGHLRWLRNVAVALGNAPWSNAVITALESRKGEH
                     PLLDENIEWAIAQQIEKRNACIIEVQLPKKQRLVRVIEKGLVRDA"
     gene            complement(3854..3929)
                     /locus_tag="MOX77_000005"
     tRNA            complement(3854..3929)
                     /locus_tag="MOX77_000005"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3894..3896),aa:Gly,seq:gcc)
     gene            complement(4086..4161)
                     /locus_tag="MOX77_000006"
     tRNA            complement(4086..4161)
                     /locus_tag="MOX77_000006"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4126..4128),aa:Gly,seq:gcc)
     gene            4457..5176
                     /locus_tag="MOX77_000007"
     CDS             4457..5176
                     /locus_tag="MOX77_000007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter substrate-binding
                     protein"
                     /protein_id="HCA3355701.1"
                     /translation="MLLASLSVHAASVSARTLHFGTSATYAPYEFVDADNKIVGFDID
                     VANAVCKEMQAECSFTNQSFDSLIPGLRFKKFDAVIAGMDMTPKREQQVSFSQPYYEG
                     LSAVVVTRKGAYHTFADLKGKKVGLENGTTHQRYLQDKQQAITPVAYDSYLNAFTDLK
                     NNRLEGVFGDVAAIGKWLKNNPDYAIMDERASDPDYYGKGLGIAVRKGNDALLQEINA
                     ALDKVKASPEYAQMQEKWFTQ"
     gene            complement(5238..5783)
                     /gene="orn"
                     /locus_tag="MOX77_000008"
     CDS             complement(5238..5783)
                     /gene="orn"
                     /locus_tag="MOX77_000008"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020882950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligoribonuclease"
                     /protein_id="HCA3355702.1"
                     /translation="MSADENNLIWIDLEMTGLDPERDRIIEIATLVTDASLNILAEGP
                     TIAVHQSDAQLALMDDWNVRTHTGSGLVDRVKASTMGERDAELATIEFLKTWVPAGKS
                     PICGNSIGQDRRFLFKYMPELEAYFHYRYLDVSTLKELARRWKPEILAGFTKQGTHQA
                     MDDIRESVAELAYYREHFIKL"
     gene            5890..6942
                     /gene="rsgA"
                     /locus_tag="MOX77_000009"
     CDS             5890..6942
                     /gene="rsgA"
                     /locus_tag="MOX77_000009"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313167.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="small ribosomal subunit biogenesis GTPase RsgA"
                     /protein_id="HCA3355703.1"
                     /translation="MSKNKLSKGQQRRVNANHQRRLKTSAEKADYDDNLFGEPAEGIV
                     ISRFGMHADVESADGEVHRCNIRRTIRSLVTGDRVVWRPGKAAAEGVNVKGIVEAVHE
                     RTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVGCETLQVEPLIVLN
                     KIDLLDDEGMDFVNEQMNIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGV
                     GKSSLLNALLGLQNEILTNDVSNVSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLW
                     HLEPEQITQGFVEFHDYLGHCKYRDCKHDADPGCAIREAVENGAIAETRFENYHRILE
                     SMAQVKTRKNFSDTDD"
     gene            7034..8002
                     /gene="psd"
                     /locus_tag="MOX77_000010"
     CDS             7034..8002
                     /gene="psd"
                     /locus_tag="MOX77_000010"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463212.1"
                     /note="Phosphatidylserine decarboxylase is synthesized as
                     a single chain precursor. Generation of the pyruvoyl
                     active site from a Ser is coupled to cleavage of a Gly-Ser
                     bond between the larger (beta) and smaller (alpha chains).
                     It is an integral membrane protein; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HCA3355704.1"
                     /translation="MLNSFKLSLQYILPKLWLTRLAGWGASKRAGWLTKLVIDLFVKY
                     YKVDMTEAQKPDTASYRTFNDFFVRPLRDDVRPLNTDPNILVMPADGVISQLGRIEED
                     KILQAKGHNYSLEALLAGNYLMADKFRNGTFVTTYLSPRDYHRVHMPCNGILREMIYV
                     PGDLFSVNYLTAQNVPNLFARNERVICLFDTEFGPMAQILVGATIVGSIETVWAGTIT
                     PPREGIIKRWTWPEGEHEGSVALLKGQEMGRFKLGSTVINLFAPGKVNLIASLASLSV
                     TKIGQPLATSTETFVAPEVEPAPLPAEEIKAEHDASPLVDNKKDDT"
     gene            8021..11347
                     /gene="mscM"
                     /locus_tag="MOX77_000011"
     CDS             8021..11347
                     /gene="mscM"
                     /locus_tag="MOX77_000011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="miniconductance mechanosensitive channel MscM"
                     /protein_id="HCA3355705.1"
                     /translation="MRLIIAFLMAWCLSTGAFAATAPDAKQITQELEQAKAAKPAQPE
                     AVEALQTALNALEERKGSLERAKQYQHVIDNFPKLSATLRAQLNNLRDEPRSVPPEMS
                     TEALNQEILQVSSQLLDKTREAQQEQERVREIADSLSQLPQQQNDARRQLNEIERRLG
                     AAGGSAALSQAQSLSMQAESAKLKALVDELELAQLSANNRQELARLRSELAEKQSQQL
                     DAYLQALRNQLNSLRQREAERALESTELLAENSAGLPEGIVEQFKVNRGLSQALNQQA
                     QRMDLVASQQRQATSQTLQVRQALNTLREQSQWLGVSNMLGEALRAQVARLPEMPKPQ
                     QLDTEMAQLRVHRMRYEELLNKQPQLRQIRQANGQPLTAEQNQILDAQLRTQRELLNS
                     LLQGGDTLILELTKLKVSNSQLEDALKEVNEATHRYLFWTADVSPLSLSWPVDLVQDL
                     RRLISLDTFNQLGKASIMMLTSKETLLPLFGALALVGFSLYSRQHFNRFLERSASRVG
                     KVTQDHFSLTLRTVFWSILVASPLPVLWATLGYGLQEAWPYPLAVAIGDGVTATVPLL
                     WVVMICAAFARPNGLFVAHFGWPRNRVAKAMRYYLMSIGLIVPLIMAVIMFDNLNDRE
                     FSGSLGRLCFILICGALALVTLSLKKAGIPLYLDKEGNGDNMVNSLLWNMLMGAPLIA
                     ILAAAVGYLATAQALLARLETSVAIWFLLLVIYHVIRRWMLIQRRRLAFDRAKHRRAE
                     MLAQRARGEEEPAHSSSLEGAVDIDESEIDLDAISAQSLRLVRSILMLIALLSVIVLW
                     SEIHSAFGFLENISLWDVTSTVQGVESLEPITLGAVLIAILVFIITTQLVRNLPALLE
                     LALLQHLDLTPGTGYAITTITKYLLMLIGGLVGFSMIGIEWSKLQWLVAALGVGLGFG
                     LQEIFANFISGLIILFEKPIRIGDTVTIRDLTGSVTKINTRATTISDWDRKEIIVPNK
                     AFITEQFINWSLSDSVTRVVLTIPAPADANSEEVTQILLTAAQRCSLVLDNPPPEIFL
                     VDLQQGIQIFELRIYAAEMGHRMPLRHEIHQLILAGFREHGIDMPFPPFQMRLESLGG
                     KQTGRTLTSAGKTSRPAGSL"
     gene            complement(11484..11804)
                     /locus_tag="MOX77_000012"
     CDS             complement(11484..11804)
                     /locus_tag="MOX77_000012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001682126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355706.1"
                     /translation="MNDSSRDPIITEDEIRALNFTPEDILEIEKVILSSVHVARRKVA
                     MVVGMTIGTLRDRDEDKWKHVSDIYCAYVVRCLVFRGELVGYGDLFRMRYSEINLPVA
                     DLDA"
     gene            complement(11869..13371)
                     /gene="yjeM"
                     /locus_tag="MOX77_000013"
     CDS             complement(11869..13371)
                     /gene="yjeM"
                     /locus_tag="MOX77_000013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate/gamma-aminobutyrate family transporter
                     YjeM"
                     /protein_id="HCA3355707.1"
                     /translation="MTHTIKKMSLIGLILMIFTSVFGFANSPSAFYLMGYSAIPWYIF
                     SALLFFIPFALMMAEMGSAYRKEEGGIYSWMNNSVGPRYAFIGTFMWFSSYVIWMVST
                     AAKIWVPFSTFVFGADMTQHWRIAGLEPTQVVGLLAVGWMILVTCVAARGINKIARIT
                     AVGGIAVMCLNLVLLLVSVAILLLNGGHFAQEINFTSSPNPGYHSGLAMLSFVVFAIF
                     AYGGIEAVGGLVDKTEKPEKNFAKGIVFAAIVISIGYSLAIFLWGVSTNWQQILSNSA
                     VNLGNITYILMSSLGTTLGNALNLSPEAAMTVGVWFARITGLSMFLAYTGAFFTLSYS
                     PLKAIIQGTPKALWPAPMTTLNANGMPATAMWLQCVLVSLFILLVSFGGDTASAFYNK
                     LTLMANVSMTLPYLFLALAFPFFKARQDLERPFVLFKTKASTLVATGVVVLVVTFANV
                     FTIIQPVIEAGDWDSALWMIGGPIFFSLLAMAIYQNYSSRMSADPEWAAE"
     gene            complement(13597..14574)
                     /gene="epmA"
                     /locus_tag="MOX77_000014"
     CDS             complement(13597..14574)
                     /gene="epmA"
                     /locus_tag="MOX77_000014"
                     /EC_number="6.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000004771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P--(R)-beta-lysine ligase"
                     /protein_id="HCA3355708.1"
                     /translation="MSETATWQPSASIPNLLKRAAIMAEIRRFFADRGVLEVETPCMS
                     QATVTDIHLFPFETRFVGPGHSQGINLYLMTSPEYHMKRLLAAGCGPVFQLCRSFRNE
                     EMGRHHNPEFTMLEWYRPHYDMYRLMNEVDDLLQQVLDCQPAESLSYQQAFLRHLEID
                     PLSADKTQLREAAAKLDLSNIADTEEDRDTLLQLLFTMGVEPHIGKEKPTFIYHFPAS
                     QASLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQ
                     QPIDQNLLDALAAGLPDCSGVALGVDRLVMLALGAESLADVIAFTVDRA"
     gene            14897..16687
                     /gene="frdA"
                     /locus_tag="MOX77_000015"
     CDS             14897..16687
                     /gene="frdA"
                     /locus_tag="MOX77_000015"
                     /EC_number="1.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase (quinol) flavoprotein
                     subunit"
                     /protein_id="HCA3355709.1"
                     /translation="MQTFQADLAIIGAGGAGLRAAIAAAQANPNAKIALISKVYPMRS
                     HTVAAEGGSAAVAQDHDSFDYHFHDTVAGGDWLCEQDVVDYFVHHCPTEMTQLEQWGC
                     PWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLD
                     ILVDDNHARGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAL
                     SHGVPLRDMEFVQYHPTGLPGSGILMTEGCRGEGGILVNKNGYRYLQDYGMGPETPLG
                     EPKNKYMELGPRDKVSQAFWHEWRKGNTISTPRGDVVHLDLRHLGEKKLHERLPFICE
                     LAKAYVGVDPVKEPIPVRPTAHYTMGGIETDQNCESRVKGLFAVGECSSVGLHGANRL
                     GSNSLAELVVFGRLAGEQAMERAATAGAANSAALDAQVADIEQRLKNLVNQEGNENWS
                     KIRDEMGLSMEEGCGIYRTPELMQKTVDKLAELQERFKRVRISDTSSVFNTDLLYTIE
                     LGHGLNVAECMAHSALARKESRGAHQRLDEGCTERDDVNFLKHTLAFRDADGTTRLEY
                     SDVKITTLPPAKRVYGGEAEAADKKEKANG"
     gene            16680..17414
                     /gene="frdB"
                     /locus_tag="MOX77_000016"
     CDS             16680..17414
                     /gene="frdB"
                     /locus_tag="MOX77_000016"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020882957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase iron-sulfur protein"
                     /protein_id="HCA3355710.1"
                     /translation="MAEMKNLKVEVVRYNPETDTAPHSAFYEVPYDETTSLLDALGYI
                     KDNLSPDLSYRWSCRMAICGSCGMMVNNVPKLACKTFLRDYTNGMKVEALANFPIERD
                     LVIDMTHFIESLEAIKPYIIGNSRTPDQGPNVQTPAQMAKYHQFSGCINCGLCYAACP
                     QFGLNPEFIGPAAITLAHRYNEDSRDHGKKERMAQLNSPNGVWTCTFVGYCSEVCPKH
                     VDPAAAIQQGKVESSKDFLIATLKPR"
     gene            17425..17820
                     /gene="frdC"
                     /locus_tag="MOX77_000017"
     CDS             17425..17820
                     /gene="frdC"
                     /locus_tag="MOX77_000017"
                     /EC_number="1.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase subunit FrdC"
                     /protein_id="HCA3355711.1"
                     /translation="MTTKRKPYVRPMTSTWWKKLPFYRFYMLREGTAVPAVWFSIELI
                     FGLFALKHGAESWMGFVGFLQNPVVVILNLITLAAALLHTKTWFELAPKAANIIVKDE
                     KMGPEPIIKGLWVVTAVVTVVILYVALFW"
     gene            17831..18190
                     /gene="frdD"
                     /locus_tag="MOX77_000018"
     CDS             17831..18190
                     /gene="frdD"
                     /locus_tag="MOX77_000018"
                     /EC_number="1.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase subunit FrdD"
                     /protein_id="HCA3355712.1"
                     /translation="MINPNPKRSDEPVFWGLFGAGGMWGAIIAPVIVLLVGIMLPLGL
                     FPGDALSFERVLTFAQSFIGRVFLFLMIVLPLWCGLHRMHHAMHDLKIHVPAGKWVFY
                     GLAAILTVVTAIGVITL"
     gene            18302..18835
                     /locus_tag="MOX77_000019"
     CDS             18302..18835
                     /locus_tag="MOX77_000019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipocalin family protein"
                     /protein_id="HCA3355713.1"
                     /translation="MRLLPVVAAVTAAFLVVACSSPTPPKGVTVVNNFDAKRYLGTWY
                     EIARLDHRFERGLEQVTATYSLRDDGGINVINKGYNPAREMWQKTEGKAYFTGSPNRA
                     ALKVSFFGPFYGGYNVIALDREYRHALVCGPNRDYLWILSRTPTLSEEIKQQMLAVAT
                     REGFDVNKLIWVKQSGS"
     gene            complement(18852..19169)
                     /gene="sugE"
                     /locus_tag="MOX77_000020"
     CDS             complement(18852..19169)
                     /gene="sugE"
                     /locus_tag="MOX77_000020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quaternary ammonium compound efflux SMR
                     transporter SugE"
                     /protein_id="HCA3355714.1"
                     /translation="MSWIILLIAGLLEVVWAVGLKYTHGFSRLTPSIITITAMVISMA
                     LLSWAMKTLPVGTAYAIWTGIGAVGAAITGILLLGESASPARLLSLGLIVAGIIGLKL
                     SAH"
     gene            19425..20012
                     /locus_tag="MOX77_000021"
     CDS             19425..20012
                     /locus_tag="MOX77_000021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HCA3355715.1"
                     /translation="MLKILVIDRCHFTRTGMEAWLNHTDVLSSSLLVSGMNNLILAKE
                     HILQWKPHLVIADLYGFLNDALPEQPINAFFAACRMTPLVLLQSGNMPYRSQYASHAV
                     LSKHTPLHELAQRIKGALYTHPLQEAPESATPLLSPQEEKVLAMWTEGTSNKEIAYAL
                     GIHGKTVYTYKRNIRMKLHMDNRYSPFLMLPEKID"
     gene            complement(20043..20189)
                     /gene="ecnB"
                     /locus_tag="MOX77_000022"
     CDS             complement(20043..20189)
                     /gene="ecnB"
                     /locus_tag="MOX77_000022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein toxin entericidin B"
                     /protein_id="HCA3355716.1"
                     /translation="MVKKTIAAIFSVLVLSTVLTACNTTRGVGEDISDGGSAISGAAT
                     RAQQ"
     gene            complement(20297..20431)
                     /locus_tag="MOX77_000023"
     CDS             complement(20297..20431)
                     /locus_tag="MOX77_000023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463199.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="entericidin A/B family lipoprotein"
                     /protein_id="HCA3355717.1"
                     /translation="MMKRFIGLVALVLLTGTLLTACNTARGFGEDIQHLGHAISRAAS
                     "
     gene            complement(20492..21058)
                     /gene="efp"
                     /locus_tag="MOX77_000024"
     CDS             complement(20492..21058)
                     /gene="efp"
                     /locus_tag="MOX77_000024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004871142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HCA3355718.1"
                     /translation="MATYYSNDFRSGLKIMLDGEPYAVESSEFVKPGKGQAFARVKLR
                     RLLTGTRVEKTFKSTDSAEGADVVDMNLTYLYNDGEFWHFMNNETFEQLSADAKAIGD
                     NAKWLLDQAECIVTLWNGQPISVTPPNFVELEIVDTDPGLKGDTAGTGGKPATLSTGA
                     VVKVPLFVQIGEVIKVDTRSGEYVSRVK"
     gene            21099..22127
                     /gene="epmB"
                     /locus_tag="MOX77_000025"
     CDS             21099..22127
                     /gene="epmB"
                     /locus_tag="MOX77_000025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EF-P beta-lysylation protein EpmB"
                     /protein_id="HCA3355719.1"
                     /translation="MAHIVTLNTPLREDWLAQLADVVTNPDELLHLLQIEADENLRAR
                     QDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDEFIVAPGFSTDPLEEQHSVVP
                     GLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQGNKRNWTVALEYIAAHPELDEI
                     IFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPIVIPARITDELVARFDQSCL
                     QILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRGVNDNAQTLANLSNALFD
                     AGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMVPRLAREIGGEPSKTP
                     LDLQLRQC"
     gene            22409..23266
                     /locus_tag="MOX77_000026"
     CDS             22409..23266
                     /locus_tag="MOX77_000026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjeJ family protein"
                     /protein_id="HCA3355720.1"
                     /translation="MALTIKGLNTGVIRHNDKFIALALKVKSLRNKETLLFFPVLALR
                     DLLIGLEHRLYLQYSLPEQEQEKRQKAKSSHVLKMHENIPAILREELENADVNQRVES
                     LALSDNTEKVLTFTLKLHNGSHLDLQVGEWQVEVLVMAIIHAINNAEMRELALRISSM
                     LDFLPLYDADCLDNGNIEFDTYNQPDWKHNLYNHYLALVYRYTDEAGQSHDCGTIIKT
                     RSQSGSKEAEAISRRLLNFSPRLKKLEGKPCKVFVRTLGTGKAARLTQDQCMRALHNL
                     RMASSQEKR"
     gene            complement(23314..23667)
                     /locus_tag="MOX77_000027"
     CDS             complement(23314..23667)
                     /locus_tag="MOX77_000027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463195.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4156 domain-containing protein"
                     /protein_id="HCA3355721.1"
                     /translation="MHVKYLAGIVGAALLMAGCSSSNELTAAGQNVRFVEDKPGAECQ
                     LIGTATGKQSNWFSGQHGEEGGSMRGAANDLRNQAAAMGGNVLYGVSSPSQGMLSSFV
                     PTASEMNGQVYKCPN"
     gene            complement(23911..25557)
                     /gene="groL"
                     /locus_tag="MOX77_000028"
     CDS             complement(23911..25557)
                     /gene="groL"
                     /locus_tag="MOX77_000028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120975.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HCA3355722.1"
                     /translation="MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSF
                     GAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIITE
                     GLKAVAAGMNPMDLKRGIDKAVAAAVEELKALSVPCSDSKAIAQVGTISANSDETVGK
                     LIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESP
                     FILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAV
                     KAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIID
                     GVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEK
                     KARVEDALHATRAAVEEGVVAGGGVALIRVASKIADLKGQNEDQNVGIKVALRAMEAP
                     LRQIVLNCGEEPSVVANTVKGGDGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAA
                     SVAGLMITTECMVTDLPKSDAPDLGAAGGMGGMGGMGGMM"
     gene            complement(25601..25894)
                     /locus_tag="MOX77_000029"
     CDS             complement(25601..25894)
                     /locus_tag="MOX77_000029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000027827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HCA3355723.1"
                     /translation="MSIRPLHDRVIVKRKEVESKSAGGIVLTGSAAGKSTRGEIIAVG
                     KGRILDNGTVQPLDVKVGDIVIFNDGYGVKSEKIDNEEVLIMSESDILAIVEA"
     gene            26170..27411
                     /locus_tag="MOX77_000030"
     CDS             26170..27411
                     /locus_tag="MOX77_000030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HCA3355724.1"
                     /translation="MNELKKELGLVQGVILLTTSLLGTGVFALPELAALAAGDISLWA
                     WPLLIILIFPIAIVFAVLGRHFPHAGGVAHFVGMAFGPRLQRVISWLFLSVIPVSFPA
                     ALHIAVGFGQALFGWQSEQLLFGELGTLGLLWFMGSRGASSSANLQAIIAGLIIALIA
                     AILWKGAIKPADITFPAANEIIFSRLCTALAIMFWGFVGIEAFTHLSSEFKNPERDFP
                     RALIIGLMLAGAIYWTCTAVVLHFGVYSDKIAATASLPLIIVHLFGIQALWIACIIGY
                     LTCFASLNMYAQSFARLIWTQMQYQPDHYLAQLSPGRLPLHALNVILACCCVSSLVVY
                     ALKINLNALIVYANGIFIMLYLLCMLAGCRLLKGRCYALAVTGCLLCLLLLVMLGWKS
                     LYAIIMLAALWLFLPKRKRMA"
     gene            complement(27470..27946)
                     /gene="fxsA"
                     /locus_tag="MOX77_000031"
     CDS             complement(27470..27946)
                     /gene="fxsA"
                     /locus_tag="MOX77_000031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein FxsA"
                     /protein_id="HCA3355725.1"
                     /translation="MRWIPFLAVFLYVYIEISIFIQVAHVLGVLMTLILVIFTSVIGM
                     SLVRNQGFKNFLLMQQKMAAGESPAAEMIKSVSLIIAGLLLLLPGFFTDFLGLLLLLP
                     PVQKHLTLKLLPHLRFSRMPGGGFSAGTGGGETFDGEYQRKDDDRDRIEHKDDRRD"
     gene            28287..29723
                     /gene="aspA"
                     /locus_tag="MOX77_000032"
     CDS             28287..29723
                     /gene="aspA"
                     /locus_tag="MOX77_000032"
                     /EC_number="4.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HCA3355726.1"
                     /translation="MSNNIRIEEDLLGTREVPAEAYYGVHTLRAIENFYISNNKISDI
                     PEFVRGMVMVKKAAALANKELQTIPKSVANAIIAACDEVLNNGKCMDQFPVDVYQGGA
                     GTSVNMNTNEVLANIGLELMGHQKGEYQYLNPNDHVNKCQSTNDAYPTGFRVAVYASI
                     VKLIDAINQLREGFERKAVEFQDILKMGRTQLQDAVPMTLGQEFRAFSILLKEEVKSI
                     ERTAELLLEVNLGATAIGTGLNTPKEYSPLAVKKLAEVTGFACVPAEDLIEATSDCGA
                     YVMVHSALKRLAVKMSKICNDLRLLSSGPRAGLNEINLPELQAGSSIMPAKVNPVVPE
                     VVNQVCFKVIGNDTTVTMAAEAGQLQLNVMEPVIGQAMFESIHILSNACYNLLEKCVN
                     GITANKEVCEGYVYNSIGIVTYLNPFIGHHNGDIVGKICAETGKSVREVVLERGLLTE
                     AELDDIFSVQNLMHPAYKAKRYTDESEQ"
     gene            29838..31139
                     /gene="dcuA"
                     /locus_tag="MOX77_000033"
     CDS             29838..31139
                     /gene="dcuA"
                     /locus_tag="MOX77_000033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter DcuA"
                     /protein_id="HCA3355727.1"
                     /translation="MIVVELIIVLLAIFLGARLGGIGIGFAGGLGVLVLAAIGVKPGT
                     IPFDVISIIMAVIAAISAMQVAGGLDYLVNQTEKLLRKNPKYITILAPIVTYFLTIFA
                     GTGNISLATLPVIAEVAKEQGIKPCRPLSTAVVSAQIAITASPISAAVVYMSSVMEGH
                     GISYIHLLSVVIPSTLLAVLVMSFLVTMLFNSKLSDDPIYRKRLEEGLIELRGEKQIE
                     IKPMAKNSVWLFLLGVICVVVYAIVNSPSLGLVEKPLMNTTNAILIIMLSVATLTTIL
                     CKVETDAILNSSTFKAGMSACICILGVAWLGDTFVSANIDWIKDTAGSVIQGHPWLLA
                     VIFFFASALLYSQAATAKALMPMALALNVSPLTAVASFAAVSGLFILPTYPTLVAAVQ
                     MDDTGTTRIGKFVFNHPFFIPGTLGVVLAICSGFLLGSFML"
     gene            31260..31607
                     /gene="cutA"
                     /locus_tag="MOX77_000034"
     CDS             31260..31607
                     /gene="cutA"
                     /locus_tag="MOX77_000034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divalent cation tolerance protein CutA"
                     /protein_id="HCA3355728.1"
                     /translation="MLDVKSQDISIPEAVVVLCTAPDEATAQDLAAKVLAEKLAACAT
                     LLPGATSLYYWEGKLEQEYEVQMILKTTVSHQQALIDCLKSHHPYQTPELLVLPVTHG
                     DTDYLSWLNASLR"
     gene            31583..33286
                     /locus_tag="MOX77_000035"
     CDS             31583..33286
                     /locus_tag="MOX77_000035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD"
                     /protein_id="HCA3355729.1"
                     /translation="MAQRIFTLILLLCSTSAFAGLFDAPGRSQFVPADRAFVFDFQQN
                     QHDLTLSWQVKEGYYLYRKQISITPTKADIAAVQLPAGVWHEDEFYGKSEIYRKRLNV
                     PVTVNQAAAGATLTITYQGCADAGFCYPPETKTVPLSEVAAAIDATPTPAVTQTGETS
                     KPAAQLPFSALWALLIGIGIAFTPCVLPMYPLISGIVLGGRQRLSTGRALLLAFIYVQ
                     GMALTYTALGLVVAAAGLQFQAALQHPYVLIGLAIVFTLLALSMFGLFTLQLPSSLQT
                     RLTLMSNRQQGGSPGGVFVMGAIAGLICSPCTTAPLSAILLYIAQSGNMWLGGGTLYL
                     YALGMGLPLMLVTVFGNRLLPKSGPWMAHVKTAFGFVILALPVFLLERIIGEAWGLRL
                     WSLLGVAFFGWAFITSLQARRAWMRIVQIILLAAALISVRPLQDWAFGSPSAQAPAHL
                     NFTAISTVDELNQALAQAKGKPVMLDFYADWCVACKEFEKYTFSDPRVQQVLGDTVLL
                     QANVTANNAQDVALLKHLQVLGLPTILFFDAQGQEQPQARVTGFMDAATFSAHLHDRQ
                     P"
     gene            33323..33898
                     /locus_tag="MOX77_000036"
     CDS             33323..33898
                     /locus_tag="MOX77_000036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HCA3355730.1"
                     /translation="MQREDILGEALKLLETQGIADTTLEMVAERVNRPLDTLQRFWPD
                     KEAILYDALRYLSQQVDIWRRQLLLDETFSAEQKLLARYSALSECVSNNRYPGCLFIA
                     ACTFYPDPTHPIHQLANQQKRAAHDFTHGLLTTLEIDDPAMVARQMELVLEGCLSRML
                     VNRSQADVDTAQRLAEDILRFAQCRQGGALT"
     gene            34014..34089
                     /locus_tag="MOX77_000037"
     tRNA            34014..34089
                     /locus_tag="MOX77_000037"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:34047..34049,aa:Phe,seq:gaa)
     gene            34249..35508
                     /locus_tag="MOX77_000038"
     CDS             34249..35508
                     /locus_tag="MOX77_000038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000954536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase arm-type DNA-binding domain-containing
                     protein"
                     /protein_id="HCA3355731.1"
                     /translation="MLTDSKIRAAKPLAKSYKLTDAQGLYLTVSTSGSKLWYFRYRFE
                     GKENRLAFGPYPQVTLAEAREKRDAARKLLVSGVCPSLPRKAEKAAVDGTRTFQYIAT
                     AWHSSCLKLWSEDHADKILTCLKRYVFPDIGAMDIAEVETRHLAQLVKSIDDKGVHDV
                     AGRVRQHLTKIMRHAVQQGTIKYNPAYDLDGVVTPVVTQHHPALPLKRLPELLDKING
                     YKGRELTRLALELNLHVFLRSSELRLARWDEFNLKARIWTVPAKREAVKNVRFSERGA
                     KMKDEHLVPLSAQAVALLEQIKEITGESVFVFAGAHSMNKPMSENTINKALRVIGYDT
                     KTEVCGHGFRTMACSALNESALWSKDAIERQMSHKERNGVRAAYVHKAEHLEARMEMM
                     QWWSDYLDMSREGYVAPYIYARRHKAA"
     gene            35819..37102
                     /locus_tag="MOX77_000039"
     CDS             35819..37102
                     /locus_tag="MOX77_000039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000975157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HCA3355732.1"
                     /translation="MMKEKKTLLNNNENGTGLPSKPSIMSENKLQNTVFSAIGSASPA
                     HKLVQGSSAAAFLKNHESLLAGTAVSSAFATQKPAQGSSAAAFLKNHESLLAGTAVSS
                     AFATQKLAQGSSAAAFLKNHESLLAGTAVSSAFATQKLAQGSSAAAFLKNHESLLAGT
                     AVSSAFATQKLAQGSSVAAFLKSHESLFASTAVSSAFAAQKLVQDSGITALFKKQGGI
                     FNENYFATSIAKQLEKLDATEIQTLQEAAILFSRSPQGAAIIATNIHAVEVKEPDALT
                     KLKNYIEKSPITSNFRKLPLLVQLIIIYLVTTMYSVVVDKNKELAMNLMEQAQQYVSK
                     SISPRTHFKELTKQLPREVDISTLKHIRIITGENVRLRNTPSMQGDVLVKLEKYTPVI
                     VIDKSDRKWLYVQLSFGEQKIYGWVNRSYTKAINH"
     gene            37187..37456
                     /locus_tag="MOX77_000040"
                     /pseudo
     CDS             37187..37456
                     /locus_tag="MOX77_000040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000954536.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
     gene            complement(38083..38865)
                     /locus_tag="MOX77_000041"
     CDS             complement(38083..38865)
                     /locus_tag="MOX77_000041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000511749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase domain-containing protein"
                     /protein_id="HCA3355733.1"
                     /translation="MGILAQEMKRLAQQAGGSHKTVHDRIKLAQGITKRSLQNEMAAV
                     RCILKQAGRDRLAQSERLNNRSLGLSGASRNGTKLAITPEHYRDVLETARVKDPGMAA
                     ALELSKLMGLRSQEAVQSVQSLKTWRQALDRGDTRLTVVFGTKGGRPRETIILDAVAV
                     RKALDNALAVAEDRHDRLIDKPDLKTAMKYWHSQASRLGLTGAYSPHSLRYAWAQDAI
                     RHYLAQGFSEKEALAMTAMDLGHGDGRGRYVAQVYGRKDGGD"
     gene            39135..39329
                     /locus_tag="MOX77_000042"
     CDS             39135..39329
                     /locus_tag="MOX77_000042"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355734.1"
                     /translation="MSESSHELAQLSCLVQVEKAACVTFPLYAVKVTHWTGAVSENLS
                     LVQFYDHAAAKPAVFAGRSP"
     gene            complement(39722..39943)
                     /locus_tag="MOX77_000043"
     CDS             complement(39722..39943)
                     /locus_tag="MOX77_000043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000193311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HCA3355735.1"
                     /translation="MTQQDWHPADIIAGLRKRGTSLAALSRQSGLASSTLANALIRHW
                     PKGERLIAEALGIAPEQIWPSHYRKPENY"
     gene            complement(39940..40401)
                     /locus_tag="MOX77_000044"
     CDS             complement(39940..40401)
                     /locus_tag="MOX77_000044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000246267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355736.1"
                     /translation="MATTLTQTHPLLSVPFNAATDFTVLAEHCKQFAEILIEHDDPTL
                     KMALCGRLNACLQLLQPSLLDPIPEHMMDSLIVDTLPTRSPRFDPECTELCNYCLALT
                     QVLTGQGLLPETRNYLGCLLYDLIHYFSDEITAPRWLRTADGVKFIDEVTA"
     gene            40948..42621
                     /locus_tag="MOX77_000045"
     CDS             40948..42621
                     /locus_tag="MOX77_000045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010989301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355737.1"
                     /translation="MNSIFYLERHFTHGDRTYTETELLAASTHVVVLAEPGGGKTELM
                     KSLARKLNTTVLNASVFAYAGADKENSALVIDAVDEVARIDQSGIHKLLALARTSKPT
                     RVIMSSRSSEWGQACTSIFEKFLGFSPMVVRLKEFDQDEQHAIFKHHAPEEDFFAFQT
                     EVTRFSLDMLLPNPQFLKMFTDAYLESGRRFADKRSIFALAVERLAKEVNPDIPKAPV
                     SLSVAQKISFSAEVYAKLLLSGAEGVSTIDVTANRMYPMLPALFSSSAACYDILSTQL
                     FKPGDKEDQHRPVHKIVAEYCAADYLIKRIADPVDVLTLPKCLPVIAPNGIARDELRG
                     LLGWMAALGNRSVQGSIIELDAYAVLANGDPSQLERSSKRQLLYQLKEIEAADPYFRR
                     SDFWRRFSAAGFFTQDVVEEIKPLLTMGNDGHLRDLILELLADSPVNSQLVPELSQLT
                     LNPNESEHIRTLASRCLLNIKEYDCIGALAVLIFEASNISLNIAANVIEVTGPEKFDH
                     RYLSGFFRVCANLYPGHEEQFERVVGLVILLKSSFPVFHCILSNFFWTN"
     gene            42702..44987
                     /locus_tag="MOX77_000046"
     CDS             42702..44987
                     /locus_tag="MOX77_000046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010989300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355738.1"
                     /translation="MVDRYFELAQAPFDPVRIWQWIGNLNFHHQCQADQSKSVQVLRE
                     NDTLRQGIIAYVFGPLTDRNEIFNTRVEKFDGHLHSHSGLHLWRNDYKFILNLAFEAD
                     NVDLWASFLVNHQRYRNKEEQGPDDLRAQMRRHALSKPAFMREWARYNNAMKLSGQKS
                     QLRRFRHSRKMKRRDRKQREIHARNIKFVNENRDIVERGRHWRCLLRFAELVLMHPER
                     IELEFGDEKLVRTALRNCLDFITPEVPTLPELAALQCESKYRHSETVLYAACLEILRA
                     EGNLECVNIELLTALRTNIHRGYHSVSKEERDALQTEIDRLIFPYSESAEKYLRQYVE
                     PQLTQPCPHPEIGVLSRQEVFRHSRAKLSIEWLRRFPDVSLNSVDTLFEIAAQYGDRE
                     NLKEIIAERCSEMMSGWPNPKENEDIERKRIFWLVREFYFMENIADTYWAWLKSDKNN
                     LLHFYERSGRMNRSEHRAWPELASIKVEAILDAFIEHWPRVDLPDSWGSDSPKEEKAY
                     RFLTDLIWSINSDTSDDAIPVLDRLLNDPRFTNLHKELQSIYADQIRKKALRDFEPPT
                     PDEIVQRLDCDSVVTVEGLRQLVLQELHDFQKAIDGGEFNSADRFYEKNERLDEVKST
                     EIIAERLSLRLQPQGIAITPEHQLKGQNRSDFTASKLIGGRRRLLVTEVKGQWHRELY
                     SAASAQLYDRYSIHPDAEQQGIFLVIWFGESETVAGRKTHGIKTAQELKISIEAVLPA
                     DLRDLIDVFVLDVSRNGGHQR"
     gene            45291..45542
                     /locus_tag="MOX77_000047"
     CDS             45291..45542
                     /locus_tag="MOX77_000047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000042269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355739.1"
                     /translation="MPNNTKKTSSTIASQAAQVLKDPNASAIQKSLAGSALSQSGTSN
                     QTGGEMETTASKVLNSPKYNDQTKTLAASVLSQANKGRK"
     gene            45624..46076
                     /locus_tag="MOX77_000048"
     CDS             45624..46076
                     /locus_tag="MOX77_000048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000434168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355740.1"
                     /translation="MEQCKNDAILEHIKNYSKHIDEFRSQANSQGIWLFISTLGCWSV
                     NIPLIQVIAAILLFCIFIFNSKQDMTEKRAFHKIEEDIAKDIDSNLIGDSRKARLYDL
                     GLVEKYRKAIKPVLKTSPIFIVCYIFYSISFLVFFSNLFPRMKLIFNF"
     gene            complement(46256..46744)
                     /locus_tag="MOX77_000049"
     CDS             complement(46256..46744)
                     /locus_tag="MOX77_000049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004889762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HCA3355741.1"
                     /translation="MISAPEPLHAGHILTPFCCGVDSMDNWLKQRAMKNQVTGASRTF
                     VCCGSDSDVLAYYSLASSAVTTNTAPGRFRRNMPDPIPVVVLGRLAVDRSLHGQGVGR
                     ALVRDAGLRVIQVAETIGIRGMLVHALSDEAREFYLRVGFEPSPMDPMMLMVTLGDLV
                     HA"
     gene            complement(46741..47034)
                     /locus_tag="MOX77_000050"
     CDS             complement(46741..47034)
                     /locus_tag="MOX77_000050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1778 domain-containing protein"
                     /protein_id="HCA3355742.1"
                     /translation="MPVANSMAMKRETLNLRIKPAERDLIDRAAKARGKNCTDFVLEA
                     ARAAAEEALIEQRIIMADPEAYQAFLIRLDQAPAPNDALRKTMQTPAPWEQEK"
     gene            complement(47461..48474)
                     /locus_tag="MOX77_000051"
     CDS             complement(47461..48474)
                     /locus_tag="MOX77_000051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000449622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HCA3355743.1"
                     /translation="METNITWQQLIDEYFFAKPLRSASEWSYTKVFKSFVHYMGPLSC
                     PNDVTYHKVLAWRRFLLKEKKLSGRTWNNKVAHMRAIFNYGIQRGLLHYDENPFNNSV
                     VKPDKKRKKTLTQAQIEYAYQIMEQYENQENTGLGLKYSRCALFPAWFWLTVLDTLYY
                     TGIRQNQLLHIRLNDVDLREGQIRLITEGCKNHKEHYVPVISFLRPRLTCLMEKAQSE
                     GLKGNDRLFNIALFTGKDPAIGDDMDSPQVRAFFRRLSKECQFAISPHRFRHTLATEM
                     MKMPEQNLHMAQSVLGHSNMKSTLEYVENDIAVMGRALEAQFMQIKAAHARSIYSGLT
                     KNR"
     gene            complement(48638..50227)
                     /locus_tag="MOX77_000052"
     CDS             complement(48638..50227)
                     /locus_tag="MOX77_000052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015606341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraI domain-containing protein"
                     /protein_id="HCA3355744.1"
                     /translation="MFRKVKSWMEKKNFRQIEENKSGNAKKRLIPCTDGYFNPAAISD
                     LLQHERRQQWLRILWENSALPKERFERYFLLPLHGVVGLCQRLPASAQGKFAYTDGMV
                     DYVIQTTVFAVRLSKGYMLPRGASAEEQSAQSVSWSAVVYYAALFHSLGRLWNIEGEL
                     RSGAVWRPGLSVPEEPYRFRFKAEPDIAGAQVYGELIALRFLPEPVLQWLGKNPDILR
                     TLLAFISGRYSDAMDITDIVNEAIVHAGGIPLGFPIAQEEQTSELAEILNPAATVAPV
                     LRKGSSTTPPDVPVMVDGGQETTVLLSSLDSDAKPERGEGQPTAETDPDVLQVMSILG
                     GLTNTDTQSPEKEGVNTETDMVAGESFPEVAVALETSAAEEVINDTVTTECTGSSSGG
                     ISSLSSTELGDLFWSWLRDGLREGDIPVNTADACVHLTCGFVFISVPGVFFLFLKSHS
                     RSCSSGLKESGRKEQVQAAFEKMRKHRVSDSRRFWQCCLYEEPGGRGRYKKLTGYLIK
                     MSEIYANGNFPDDSLFLKVIN"
     gene            complement(50211..51722)
                     /locus_tag="MOX77_000053"
     CDS             complement(50211..51722)
                     /locus_tag="MOX77_000053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001120833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase"
                     /protein_id="HCA3355745.1"
                     /translation="MPHTDTPEQAAVIAWKGERLVVCAFAGSGKTTTLRRYAEENPTE
                     RMLYIAYNRAIRDEAEQKFPFNVTCKTSHQLAWPTVGKHYSHRLINSLRLTYVARALN
                     SRNWLLARLTLDVLNRFICSAATDITPEHMPDPDDCKGLQPGQILFSAKKIWAMMSAR
                     QGDFPVTHDTYLKLYQLSKPNLSSRYTTLLFDEAQDANPVISAIVLNQTCRVVLVGDT
                     HQQIYRFRGADNAMQAPQLENSDRLWLTHSFRFGPEVAGVANRLLALKGETHQITGKG
                     GAGRVLLTMPRNFGHHAVLHRSVCGVIRTALHWSLAGRKVFWVGGMESYRIEDLLDLY
                     WFSIDMSERMRHDRLTREYRDYDEYLQIAEDTGDVEMKQGIFILEQFFPLPDRLNTLR
                     EQRVISESEADVTVCTAHRSKGLEWDRVKLHDDFLDILDPDMPESQRQDEINLMYVAA
                     TRARKVLITDPILHELLIQPRAEDIAGTSADKSGESEVSTENDKKGTEYVPES"
     gene            52576..53115
                     /gene="tviA"
                     /locus_tag="MOX77_000054"
     CDS             52576..53115
                     /gene="tviA"
                     /locus_tag="MOX77_000054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001210944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Vi polysaccharide biosynthesis regulator TviA"
                     /protein_id="HCA3355746.1"
                     /translation="MRFHHFWPPNDIYFGVGAAGIIEEVSLITNDRNYLFVNLNRYSL
                     LNALNFFTRMSDINKIIVIISSSRLMPLARFWLTECKNVIAVFDAATSVQDIIRNVSQ
                     HQSGEKILTEQRDYRFRINRKDIVKMKYFLSESGMEELQDRFMNSSSTMYRWRKELAV
                     KFGVREPRYLLLPDSVTLL"
     gene            53360..54637
                     /gene="tviB"
                     /locus_tag="MOX77_000055"
     CDS             53360..54637
                     /gene="tviB"
                     /locus_tag="MOX77_000055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000466893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Vi polysaccharide biosynthesis
                     UDP-N-acetylglucosamine C-6 dehydrogenase TviB"
                     /protein_id="HCA3355747.1"
                     /translation="MFGIDEVKIAIIGLGYVGLPLAVEFGKSRQVVGFDVNKKRILEL
                     KNGVDVNLETTEEELREARYLKFTSEIEKIKECNFYIITVPTPINTYKQPDLTPLIKA
                     SETVGTVLNRGDIVVYESTVYPGCTEEECVPILARMSGMTFNQDFYVGYSPERINPGD
                     KKHRLTNIKKITSGSTAQIAELIDEVYQQIISAGTYKAESIKVAEAAKVIENTQRDLN
                     IALVNELAIIFNRLNIDTEAVLRAAGSKWNFLPFRPGLVGGHCIGVDPYYLTHKSQGI
                     GYYPEIILAGRRLNDNMGNYVSEQLIKAMIKKGINVEGSSVLILGFTFKENCPDIRNT
                     RIIDVVKELGKYSCKVDIFDPWVDAEEVRREYGIIPVSEVKSSHYDAIIVAVGHQQFK
                     QMGSEDIRGFGKDKHVLYDLKYVLPAEQSDVRL"
     gene            54640..55686
                     /gene="tviC"
                     /locus_tag="MOX77_000056"
     CDS             54640..55686
                     /gene="tviC"
                     /locus_tag="MOX77_000056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000127915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Vi polysaccharide biosynthesis
                     UDP-N-acetylglucosaminuronic acid C-4 epimerase TviC"
                     /protein_id="HCA3355748.1"
                     /translation="MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIG
                     LDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGS
                     VPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGR
                     PLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLL
                     KDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYY
                     LIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTL
                     KWYIDKHSTLYSSV"
     gene            55710..58205
                     /gene="tviD"
                     /locus_tag="MOX77_000057"
     CDS             55710..58205
                     /gene="tviD"
                     /locus_tag="MOX77_000057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010989299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Vi polysaccharide biosynthesis protein TviD"
                     /protein_id="HCA3355749.1"
                     /translation="MNLMKSSGMFTLTAIGSCRIVSPVKRAQPYFNFQANFKRIYGFT
                     HTSSEALQQIRFILGLIDIPEKVRPFIFRPNVNYSNTDVHSRSDFYIIEISSQKKIMA
                     YGFCLQINYLTRHFYEFFSQTERACMYWSLATQGNRHKLLAYLKDDPCFAGMSEDDRA
                     LLSNINVEQMDEHAIEQDMMEIVQLLGRDRVMFMTHVDAVTRAGTVILSRSRLIKNVD
                     TIAARMDIPCVNPTNLMEKWGQKRALEKNGDDLTHYTDMFGDAIVAAIFKGVINNTNH
                     HLDEGRQEKQDQIREITLSITKQLADGDIIAASQQLFAALRNQQQDPVLIQLRSVIFS
                     HLGYYEQAYQDISDVEKIIGTTDSTLRCRLRSLHGLARWREALSTAEMMLSNEIEDEE
                     VLTVAAGSADALQLFDKSYHYWKRVLLLNPETQSGWVNFLSSTQYFNDGNAFSEAFHA
                     GIQSQRLNDTFMETALSLAIKFSDELIFMHALEQLLRHESEFALTVLSTIHDTGLVIR
                     TAFCIKNMSYHQALRTSYKDKIHDVFEAWNNTALSLHSVDDFVSLSTSLAYSYSAFMV
                     YPHSRISRFNNEVKMAWRDKLREMYEREDYENILAGAKIVWPLLKFDPVGTVYCARTL
                     VNLGAWKDACTLAHMTLIRNSNITSLQSIMLRSIRHINNIPFLIDLIANVMSITLSFQ
                     NASMNKLFEKECRNVATRALKYVRQKKTEGRLDEALSVLISLKRIEPDVSRLMREYKQ
                     IIRLFNESRKDGGSTITSYEHLDYAKKLLVFDSENAYALKYAALNAMHLRDYTQALQY
                     WQRLEKVNGPTEPVTRQISTCITALQKNTSGKS"
     gene            58205..59941
                     /gene="tviE"
                     /locus_tag="MOX77_000058"
     CDS             58205..59941
                     /gene="tviE"
                     /locus_tag="MOX77_000058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000632615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Vi polysaccharide biosynthesis
                     glycosyltransferase TviE"
                     /protein_id="HCA3355750.1"
                     /translation="MITQEEKLAALGKTCLTLKQEKKLAQAVALIDSELPTEALTSLA
                     MLKKAEFLHDVNETERAYALYETLIAQNNDEARYEYARRLYNTGLAKDAQLILKKVSN
                     GVQKKYNNYLGKINKICDLLERLEGKAIPVGTNTCIIAMKHAILFYRNRQPRQLPVGS
                     FGRLALCTGSLGSGGAERQISRLAIEIARKYRQKGKIGGLKVEEPVELIIRSLTPELR
                     QDFFLKEVLEEQVEVLEIAKITGNLFDDATIESPELRLLLSHLPPVCKYGIKHLVPHL
                     CERKLDYLSVWQDSACLMIALAALIAGVPRIQLGLRGLPPVVRKRLFKPEYEPLYQAL
                     AVVPGVDFMSNNHCVTRHYADWLKLEAKHFQVVYNGVLPPSTEPSSEVPHKIWQQFTQ
                     KTQDADTTIGGVFRFVGDKNPFAWIDFAARYLQHHPATRFVLVGDGDLRAEAQKRAEQ
                     LGILERILFVGASRDVGYWLQKMNVFILFSRYEGLPNVLIEAQMVGVPVISTPAGGSA
                     ECFIEGVSGFILDDAQTVNLDQACRYAEKLVNLWRSRTGICQQTQSFLQERFTVEHMV
                     GTFVKTIASQPR"
     gene            59986..61053
                     /gene="vexA"
                     /locus_tag="MOX77_000059"
     CDS             59986..61053
                     /gene="vexA"
                     /locus_tag="MOX77_000059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000720235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Vi polysaccharide ABC transporter protein VexA"
                     /protein_id="HCA3355751.1"
                     /translation="MKKIIILLTTFFLLSGCTIPRAVFKSSLINQDDPRYNLVEVTPT
                     LKLSAPDTVPKTIVDPVFAANNWHWTSLAKGDVLHITILSSGGAGYLSNNASGDRADF
                     ENILVTDSNTVQVPYAGTIPVSGLDVTQLADEIKKRLSRVVLNPQVIVTLTARTGAMV
                     TVEGSGKTGRYPLEQSMNRLSHLLATAVAVENTSTDMMEVHVTRQQHYFTARLSDIYQ
                     YPGLDIALQPDDRITLRQVTEYVNVLGAAGVQGKHALVQRHSSVVDALALAKGLNDNL
                     ADPQAIFLYKHNEAEQAKQQMRKLNIYHVDMSQPNSVFLAQAIRVDNGDVIYISNASL
                     TDFAKVKAAFDSFLTRGTNSF"
     gene            61063..61857
                     /gene="vexB"
                     /locus_tag="MOX77_000060"
     CDS             61063..61857
                     /gene="vexB"
                     /locus_tag="MOX77_000060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001023498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Vi polysaccharide ABC transporter inner membrane
                     protein VexB"
                     /protein_id="HCA3355752.1"
                     /translation="MNILKNNSYYFMKLITVCELIILLMSRDIKTRYNGNLLNYMMVL
                     AVPLVWISITVISFQYLNRSVPISTDDISFVIAGILPYLLFRYTITATMRTHSFSTSL
                     AVVSQVKKRHVIFSLAAIEFVNAVIIYIIISLINFLIFSRWEAQKPFLIFEGMVIAWL
                     LGLSFGYFCDALSERFPLVYKAVPVMLRPMFLISAVFYTANELPYSLLSIFSWNPLLH
                     ANEIVREGMFEGYHSLYLEPFYPLAFSATLFLAGLIFHLICDTENH"
     gene            61883..62578
                     /gene="vexC"
                     /locus_tag="MOX77_000061"
     CDS             61883..62578
                     /gene="vexC"
                     /locus_tag="MOX77_000061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000467404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Vi polysaccharide ABC transporter ATP-binding
                     protein VexC"
                     /protein_id="HCA3355753.1"
                     /translation="MFGLLGCTRYFESDKGPRVVLDKTDFVMGYHEHIGILAAPGSGK
                     TTLTRLLCGLDAPDEGDFIGLRGDALPLGANSFILPGLTGEENARMMASLYGLDGDEF
                     SHFCYQLTQLEQCYTDRVSEYSVTMKTHLAFAINLLLPCRLYIADGKLYTGDNATQLR
                     MQAALACQLQQKGLIVLTHNPRLIKEHCHAFGVLLHGKITMCEDLAQATALFEQYQSN
                     QATIQTEDYSFDI"
     gene            62601..63905
                     /gene="vexD"
                     /locus_tag="MOX77_000062"
     CDS             62601..63905
                     /gene="vexD"
                     /locus_tag="MOX77_000062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000431675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Vi polysaccharide ABC transporter inner membrane
                     protein VexD"
                     /protein_id="HCA3355754.1"
                     /translation="MENSERIKKWKEERAKVAQESRASRLQQKEDERALRQTEKSADA
                     KSHHNPDAGWSATDADSVRRASLVIKERRVQQAKQSLRRLFLYIALPLLVIMLMSWIL
                     TSHFYSADATFIVQTDASQDNFSGTSFFGAGNKMSEGFQVREFILSKEMMDRMEKELG
                     FLSYFAQDDIALFSRFHAPLGINDDPYRYYLSKVSVAVDIQQGMLRLNVKARSAKQAE
                     FFAQRILSFAEQHVNTVSARMQKERILWLENDVKSAQENLGAARLELLKIQHIQKDID
                     PKETITAIYQLIAGFETQLAEAKAEYAQLMVNGLDQNPLIPRLSAKIKVLEKQIGEQR
                     NRLSNKLGSQGSSESLSLFEDLRLQSEIAKARWESALQTLQQGKLQALRERQYLLIIS
                     QPMAESDTTRYADGTKWLLFFVLLGITYLVTSLLITIRRMRE"
     gene            63925..65895
                     /gene="vexE"
                     /locus_tag="MOX77_000063"
     CDS             63925..65895
                     /gene="vexE"
                     /locus_tag="MOX77_000063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000052242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Vi polysaccharide transport protein VexE"
                     /protein_id="HCA3355755.1"
                     /translation="MSLHSTFKKISPTTLLKQEDWEGLCLYFSQHPEKVRDSAGNEQN
                     IILFAIACLRKDETDVGLTLLSDRVLTAKNGRDLLRRWVISPLASSQPDAVLQVVNKL
                     LAVNVCQPEDVLLVASVLLKSKQYATVADLAEQAWLAFSGNSQIFALHLRTLVLMDKE
                     LQAISLARTQAQEVPPRGDMIATCLSFLNKSRLPEDHDLARALLPFFALERQESAGLA
                     VDTLCAVGKYQEAIQTGESALARGLDGAALRRSLGLAYYQSGRSREAKLQAAEHWRHA
                     LQFNSDNVRIVTLYADALIRTGQNEKAIPLLQQSLATHPDLPYVRAMYARALRQVGQY
                     TAASDEFVQLAREKGVTSKWNRYAAAALLQAGKTSEAESVFEHYIQARASHLPQSFEE
                     GLLALDGQISAVNLPPERLDWAWEVAGRQSGIERDEWERRAKWGYLADNFLLDWLECR
                     GEQADEPMYRLADISHVEQFFQRLQLDQRGCIIVSAHLGAMYAGPMILSLLEMNSKWV
                     ASTPGVLKGGYGERLISVSDKSEADVVRACMQTLHSGQSLVVAIDGALNLSAPTIDFF
                     GQQITYSTFCSRLAWKMHLPTVFSVPIWKNRHIHFVLERMVDPLKFESQLSFTERWKE
                     NYLQCVTRILQSDPENLRLSGGIWRNIIRRDS"
     gene            complement(66197..66943)
                     /locus_tag="MOX77_000064"
     CDS             complement(66197..66943)
                     /locus_tag="MOX77_000064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HCA3355756.1"
                     /translation="MDIPRIFTISESEHRIHNPFTPEKYATLGRVLRMKPGMSVLDLG
                     SGSGEMLCTWARDYGITGTGIDMSPLFTAQAKLRAEELGVSERVHFVHNDAAGYVADE
                     QCDIAACVGATWIAGGVAGTMNLLAMSLKPGGIMLIGEPYWRQVPPTEEIAQACGVSS
                     VADFLTLQGLVASFDERGYDLVEMVLADQEGWDRYEAAKWLTMRRWLEDNPDDDFVQE
                     VRKELTVAPKRHVNYTREYLGWGVFALMAR"
     gene            complement(66943..67833)
                     /locus_tag="MOX77_000065"
     CDS             complement(66943..67833)
                     /locus_tag="MOX77_000065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001681808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HCA3355757.1"
                     /translation="MDISTLISSSGRLQLSAAESKIPWEELAFSQRMLENHLSQDHDW
                     ASRRQIVIEQQVGWIARQLLVGARILDIGCGPGLYTHLLAERGYCCTGVDFSPASIEW
                     ARQQAQTAGLSIDYIRQDIRTYWPETQFEFIMMTFGELNVFSATDAQTLISRCARWLV
                     PGGRLFVEVHTFDEVKRQGMAPASWQRCPHGLFLAASHLLLTENAWDEETQTSSTQFW
                     AIDENGRISRFGSQMTAWRDDEYASLLGNAGFKILSHPDSSEWPVSETFEGKLFALLA
                     EKSKSPEGRSLNTQLKKGVN"
     gene            complement(67844..68101)
                     /locus_tag="MOX77_000066"
     CDS             complement(67844..68101)
                     /locus_tag="MOX77_000066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjhX family toxin"
                     /protein_id="HCA3355758.1"
                     /translation="MNLSRQEQRTLHVLAKGGRIVHVRDASGRVTSVECYSREGLLLA
                     DCTLAVFKKLKTKKLIKSVNGQPYRINTTGLNNVRSQPDNR"
     gene            complement(68403..68513)
                     /locus_tag="MOX77_000067"
                     /pseudo
     CDS             complement(68403..68513)
                     /locus_tag="MOX77_000067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310150.1"
                     /note="with lsrACD is involved in the transport of
                     autoinducer 2 into the cell; incomplete; partial in the
                     middle of a contig; missing N-terminus and C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autoinducer 2 ABC transporter substrate-binding
                     protein"
     gene            68748..69092
                     /gene="umuD"
                     /locus_tag="MOX77_000068"
                     /pseudo
     CDS             68748..69092
                     /gene="umuD"
                     /locus_tag="MOX77_000068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001549365.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="translesion error-prone DNA polymerase V
                     autoproteolytic subunit"
     gene            complement(69208..70233)
                     /locus_tag="MOX77_000069"
     CDS             complement(69208..70233)
                     /locus_tag="MOX77_000069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HCA3355759.1"
                     /translation="MSIRKQPNGKWLCECYPNGRDGKRVRKQFATKGEAIAFENHTMD
                     EVNKKPWLGEKEDRRHLSEVIEQWHSLYGQTLADPKRLLAKLSIICNGLGDPIASELT
                     AGDFTKYREARLKGEVKNEDGVLMSPVKPRTVNLEQRNLSSVFGTLKKLGHWPAPNPL
                     AGLPTFKIAEGELAFLAPEEIKRLLDACADSQSPSLLMIAKICLATGARWSEAENLQG
                     HQLSKYRITYTKTKGKKNRTVPISQELYDELPKNRGKLFTPCRKSFERAVKRAGIELP
                     EGQCTHVLRHTFASHFMMNGGNILVLRDILGHADIKMTMVYAHFAPDHLEDAVTKNPL
                     HNLNWKR"
     gene            complement(70237..70869)
                     /locus_tag="MOX77_000070"
     CDS             complement(70237..70869)
                     /locus_tag="MOX77_000070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HCA3355760.1"
                     /translation="MSLIKAGNDSGGRDAINRLIKAYNFSSRQQLCEHLEVSKSTMAN
                     RYLRDSFPAEWVIQCALETGISLLWLATGQGDMYACENEERNLKNETSVTVRPLSKIV
                     APSIKHVELKNGELQPSDEILLDSRLLDGDSSNSLFVKTATDSFVVDTSVKQVSNGFW
                     LVDMDGVKSIVKIARVPGNKIVVHQDETSFECSVDDIEAIGRAVKVIKSL"
     gene            70986..71228
                     /locus_tag="MOX77_000071"
     CDS             70986..71228
                     /locus_tag="MOX77_000071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006817401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rha family transcriptional regulator"
                     /protein_id="HCA3355761.1"
                     /translation="MSTDISIRVPKEMATPAEFAEWEGISRGSVYQKIHHGQLAKYMV
                     KKEKNKGRVSLRYLMYKTDQVRESLGHSNFRVIVGQ"
     gene            71261..71770
                     /locus_tag="MOX77_000072"
     CDS             71261..71770
                     /locus_tag="MOX77_000072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage regulatory CII family protein"
                     /protein_id="HCA3355762.1"
                     /translation="MFDYKISKHPHFDEACRAFALRHNMAKLAERAGMKVQTLRNKLN
                     PEQPHQLTPSEIWLLTDITEDSTLVDGFLAQIHCLPCIPMNEVAKEKLPHYVMSATAE
                     IGRVAAGAVSGDVKTTAGRRDVISSINSVTRLMALAAVSMQARLQANPAMASAVDTVT
                     GLGASFGLI"
     gene            71778..71978
                     /locus_tag="MOX77_000073"
     CDS             71778..71978
                     /locus_tag="MOX77_000073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019077499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2724 domain-containing protein"
                     /protein_id="HCA3355763.1"
                     /translation="MLTKEPSFASLLVKQSPAMHCGHGWIMGKDGKRWHPCRSQDALL
                     AELSAKKQGKPWLLKVMLRLFR"
     gene            71942..72283
                     /locus_tag="MOX77_000074"
     CDS             71942..72283
                     /locus_tag="MOX77_000074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5347 domain-containing protein"
                     /protein_id="HCA3355764.1"
                     /translation="MAIEGDAATVPLSAGLRLNGLNHIAELRAKVFGLNIDSELDRFI
                     SDMRDQRDINHEQNKRALAAIFFMAKIPAERHSVNVSELTTDEKRELIKAMNHFRTVV
                     SLFPNRLAMPN"
     gene            72351..72584
                     /locus_tag="MOX77_000075"
     CDS             72351..72584
                     /locus_tag="MOX77_000075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2732 domain-containing protein"
                     /protein_id="HCA3355765.1"
                     /translation="MRNIETRITKTGPDDAGLNQMLTDARMEERRGRADVMAARLDSL
                     AARIVSRQLNHTEAAELLRQEAVKIQNEAQEIH"
     gene            72584..72811
                     /locus_tag="MOX77_000076"
     CDS             72584..72811
                     /locus_tag="MOX77_000076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraR/DksA family transcriptional regulator"
                     /protein_id="HCA3355766.1"
                     /translation="MADSMDLVQQRVEEERQRHIHTARNKTPGVSRVLCIDCDAPIPP
                     ARRRAIPGVQCCVTCQEIAELKGKHYNGGAV"
     gene            72808..73392
                     /locus_tag="MOX77_000077"
     CDS             72808..73392
                     /locus_tag="MOX77_000077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001090717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HCA3355767.1"
                     /translation="MNTDKMTISQRANQWLDNDYLFIDTETTGLGDDAEIVEICIIDS
                     HGFIMLNTLIKPTKPIPDEAIAIHGITNEMVAFAPAWTDICGAVEELFRRFGFVIYNA
                     DFDLRLIRQTYALNERPSEGAPWMLAAHSVCAMKLYAEYRGEPGRFNGYKWHKLVDAA
                     AHEGVVVEGKAHRALADCKMTLGLVRALAKGGAK"
     gene            73389..74249
                     /locus_tag="MOX77_000078"
     CDS             73389..74249
                     /locus_tag="MOX77_000078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HCA3355768.1"
                     /translation="MSTILKWAGNKTAIMPELIKHLPAGQRLVEPFAGSCAVMMATDY
                     PHYLVADINPDLINLYKKIALDCEAFISRAKNIFAIANREVAYYNIRHEFNHSSEITD
                     FMKAVYFLYLNRHGYRGLCRYNLSGHFNVPYGNYKNPYFPENEIRAFAKKAQRATFIC
                     ASYDETLAMLRAGDVVYCDPPYDGTFSGYHTASFTGDDQYHLASILERRSSEGHPIIV
                     SNSDTSLTRSLYRNFTRHRIIAKRSMGVAAGDGKSATEIIATKLVRWFGVDLASGPDV
                     SVETEVRAWQ"
     gene            74240..76635
                     /locus_tag="MOX77_000079"
                     /pseudo
     CDS             74240..76635
                     /locus_tag="MOX77_000079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001749758.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="replication endonuclease"
     gene            76803..76991
                     /locus_tag="MOX77_000080"
     CDS             76803..76991
                     /locus_tag="MOX77_000080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355769.1"
                     /translation="MQDYILESLKLQRIDFFIKLVAASECSDEEKRLAIQWVSELTDE
                     LMAKIRSHEYCRSMDVTS"
     gene            77003..77236
                     /locus_tag="MOX77_000081"
     CDS             77003..77236
                     /locus_tag="MOX77_000081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinI family protein"
                     /protein_id="HCA3355770.1"
                     /translation="MRIEIMIDKEQKISQATLDALESELYRNLRPLYPKTAIRIRKGS
                     ANGVELSGLKLDEDKKRVMEIMQQVWEDDSWLH"
     gene            77332..77550
                     /locus_tag="MOX77_000082"
     CDS             77332..77550
                     /locus_tag="MOX77_000082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000835187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355771.1"
                     /translation="MKSHDRLRIVFAQARQNWRAFAYVMQVHENHYTKRAGVAGIRAR
                     AQRLTLGPKSLQAKKLTFIFQLELSAKK"
     gene            77560..78624
                     /locus_tag="MOX77_000083"
     CDS             77560..78624
                     /locus_tag="MOX77_000083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000829584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355772.1"
                     /translation="MAENGPIEDLAKRISEDLLSRFKWQQHGPCDRDFLCDDEAKHKP
                     EGKKQKHTHPVDVVFSYKDPYLNKVIYLNTDLKSYKAGSINASKIESALASLAKTIEC
                     ARYSPEWSEKYNFSQIDCEVRGLLFVFNHDNQLQHDFYEFFNPPKPAKGRRDKAVNLE
                     KIPLSAGQQIHIIDPFLINYMLAITNDMNDLIAKKEFPDEEYGFYYPQLTFHKVAVTE
                     KYLPATIEVLSSPFMVIKHGAVYKFNRAKGIEEEVYPEGFVVYYNKKGNSDNEFFYLL
                     DILSNYQILDGINKIRIRLAYREKDERILSHFQRGVEKYAHEYGLDEEAKKRLEDLDV
                     KVVSTVKEFFSAEVISWEPK"
     gene            78621..79685
                     /locus_tag="MOX77_000084"
     CDS             78621..79685
                     /locus_tag="MOX77_000084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000789322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355773.1"
                     /translation="MKNIHSVTDKALYDALNQKQITLNEIQDLFLERGTIICKKTPRK
                     ELARNYSRMTHDYYEHQKIATLLGGQTRTEKITCVRIETGIDKKGIIDAAEKLKKEIT
                     GQDDYCKIIVDGPRVLINIRYLSTNYGKSDFKQAINKEALIEIEPLDDGYSIRRPDNE
                     NLDDYEGLLLGHISAIQNEQADDSNLDLKLNEISLSHNTSADVRTLFFDKLIRTLDGY
                     ELLDVTDAYVYHPKPETIEAEDGNTETGVHVSRASLRGEGVLKSDELSDLYDRGFYIW
                     KIKWKVKENLADPDIFELEAQFGDPLNCTNFSYLVKGVRKYKANGQYFSKPQKLSGRE
                     TERFNKLIENRAYSIIMEIS"
     gene            79705..80400
                     /locus_tag="MOX77_000085"
     CDS             79705..80400
                     /locus_tag="MOX77_000085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000080840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355774.1"
                     /translation="MSQLRLKWMRLKIRTSPEAVFDFIKNTPYSDAIGAGFTKYETIH
                     NGMTATFNKKSVVLEPIADPFGEVLEFERVVFDQISFSIQTLSNKICLLTFYNPPKTV
                     KPFIDFLSQAEGLNVAYGNLTVDLKAFMRVIRENFGVKVFGISKVKVSNLPVTEKTRA
                     CLELNSSGDALHDLKIFVGDSEFKLDKIKAGGFYLDSKISFELTSGASAVVPDEHFSI
                     FNDAISCMEIDKF"
     gene            complement(80449..81492)
                     /locus_tag="MOX77_000086"
     CDS             complement(80449..81492)
                     /locus_tag="MOX77_000086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011233140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HCA3355775.1"
                     /translation="MSEHDALTSTAPVQEAEQQKNTTHAEAFSFGDPIPVLDRRELLD
                     YVECVQMDRWYEPPVSFDGLARTYRAAVHHSSPIAVKRDILSSTYIPHRLLSQQAFAR
                     FVQDYLVFGNAYLEKRTNRLGGVLSLEPALAKYTRRGLDLDTYWFVQYDLTTQPYEFT
                     QGNIFHLMEPDINQEIYGLPGYLSAIPSTLLNESATLFRRKYYINGSHAGFIMYMTDA
                     AQNQEDVNNIRQAMKSAKGPGNFRNLFMYSPNGKKDGIQIIPLSEVAAKDEFLNIKNV
                     SRDDMMAAHRVPPQMMGIIPNNTGGFGDVEKASRVFVRNELIPLQERIKELNEWLGDE
                     VIRFAKYTLDDIS"
     gene            complement(81492..83258)
                     /locus_tag="MOX77_000087"
     CDS             complement(81492..83258)
                     /locus_tag="MOX77_000087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase ATPase subunit family protein"
                     /protein_id="HCA3355776.1"
                     /translation="MNTTLTPADLDPRRQAMLLYFQGYRVARIAEMLGEKVATVHSWK
                     KRDKWGDYGPLDQMQLTTAARYCQLIMKEQKEGKDFKEIDLLARQSERHARIGKFNDG
                     GNEADLNPKVANRNKGPRRQPEKNVFSDEQIEKLEEVFHASMFDYQRHWFEAGKINRI
                     RNLLKSRQIGATFYFAREALIDALLTGRNQIFLSASKAQAHVFKQYIIDFAKEVEVEL
                     KGDPMVLPNGAALYFLGTNARTAQSYHGNLYLDEYFWIPKFQELRKVASGMAIHKKWR
                     QTYFSTPSSLTHSAYPFWSGALFNRGRAKADKVDIDLTHSNLARGLLCPDGQYRQIVT
                     VEDAVRGGCNLFDLDQLRMEYSPDEYQNLLMCEFIDDLASVFPLSELQACMVDSWEVW
                     TDFQALALRPFGWREVWIGYDPAKGTQNGDSAGCVVIAPPTVPGGKFRILERHQWRGM
                     DFRAQADAIKKLTQQYNVTYIGIDSTGVGHGVYLNVKDFFPAVREFVYNPNVKNALVL
                     KAYDIISHRRLEFDAGHTDIAQSFMAIRRATTASGNRPTYEASRSEEASHADLAWATM
                     HALFNEPLQGEAANTSNIVEIF"
     gene            83401..84234
                     /locus_tag="MOX77_000088"
     CDS             83401..84234
                     /locus_tag="MOX77_000088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPO family capsid scaffolding protein"
                     /protein_id="HCA3355777.1"
                     /translation="MTVKAKRFRIGVEGATTDGREIQREWLVQMAASYNPTVYTALIN
                     LEHIKSYLPESTFNRYGRVTGLVAEEIQDGPLAGKMALYADIEPTDALVELVKKGQKL
                     FTSMEVSTKFADTGKAYLVGLGATDDPASLGTEMLAFSASAAHNPLANRKQNPENLFS
                     EAVETLIELEEAQDEKPSLFASVTALFTKKEQTDDARFSDVHKAVELVATEQQNLSER
                     TDKSLAENGERLSALESSLQEQQTAFAELQQQLSREDSRKDYRQRAPGGDAPAGTLTN
                     C"
     gene            84251..85315
                     /locus_tag="MOX77_000089"
     CDS             84251..85315
                     /locus_tag="MOX77_000089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006894826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein, P2 family"
                     /protein_id="HCA3355778.1"
                     /translation="MKKKTRFAFNAYLQQLARLNGVDVEELSSKFTVEPSVQQTLEDH
                     IQQSAAFLTLINITPVTEQSGQLLGLGVGSTIAGTTDTTTKEREPTDPTLMEDVEYKC
                     EQTNFDTVLTYAKLDLWAKFQDFQVRIRNAIVKRQALDRIMIGFNGVKRAKTSNRAEN
                     PLLQDVNKGWLQKIREDAPDHVMGSKTAEDGTTTAEPVKVGPGGKYVNLDAVVMDTVN
                     ELIDVEYQDDDELVVVCGRELLSDKYFPLVNKEQDNSEKIAADLIISQKRMGGLQAVR
                     APFFPANALLITRLDNLSIYWQEDTRRRSVIDNPKRDRIENFESVNEAYVVEDYRCAA
                     LVENIEIGDFSAPAAPESGE"
BASE COUNT        21725 a        21067 c        21146 g        21459 t
ORIGIN      
        1 ggctccgtcg ggcggggcgc gctttcaacc cgtttcgcga cgacaggcgg tggcggcggc
       61 ggaacatcgg cattaatggt gaaaatgacc gtatagttgc cgccgttttg ccgcttcacc
      121 gcctcggttt taccattttc cgtcagatcg acaagcagcc gtaaagattg cgcatctttc
      181 ggcgttccgg cacggatcgt ttttaccaga ttgttaccgc taaactgaag cggcagcccc
      241 tgaatcacgc cggtctgcct gatatccagc gccacggtcc gtttaccgtc ctgtgagtaa
      301 gcatattccg gctcgccgat aaaactcagc gtaatgcgcg cctgctgctc gccgttggac
      361 acctgaatat cagagagact ggcggcgccc gcctgcgcgc acagcaggat taaggctgct
      421 attacggcat ttttgatgcg ataaatcatc ccgccacctt tatagctaat cggctaaacg
      481 cgccagtaac gaatgacccg atgaggatac cgcgcttacg cgagcctcac gcccctgcgc
      541 ctggtaatca atatggattt cgacgtccgg gtcggggaga acgcctttac cttgttgcgg
      601 ccactccacc agacaaatgg cgtcgttggc gaaataatcg cgaatgccca taaactccag
      661 ctcctccggg tccgcaagac ggtataagtc gaagtgatat accatcatgt tatcaagcgc
      721 ataaggctct accagcgtat aggtggggct ttttacatta ccgttatggc ctaacgcctg
      781 taaaaatccc cggctaaacg tcgttttacc ggcacctaaa tcgccataca gataaataac
      841 ggtcgcgcca tcacaggcgt tggctacccg ttgccccagg tctagcgtcg cctgttcgtc
      901 aggtagcgga attactcgat tcatcatggt ttacgtcaat cacatcaggg ttaacaatac
      961 gccgcagcgt agtaaaaaga tcggtcgcca acatgccgcg agcgccataa cgcgctgcca
     1021 gtaagtccgc cgccgcgccg tgagccacac atcccacaca tgccgcatca tacggggtaa
     1081 acttctgtcc gagcaatgcg ccgatgatgc cggacaggac atcgcccatc ccgccgctcg
     1141 ccatccccgc attaccagcg tcaatgatag ccagagggtg gtgttcagcg gcaataatcg
     1201 ttcctgcgcc ttttaacacg accacgcctc cataccgttt taccagacgc tgtgctgaaa
     1261 gtaagcgatc actttcaatt tctgccacag aacatcctaa caggcgggcc gcctctcccg
     1321 gatgcggcgt aatcacgcga ttgtgacgtt tatcaggatt gattgccagt aggttcaacg
     1381 catccgcatc ccacagcata ggtttacgga cgttttctac tttctgtaag gcttttttgc
     1441 cccattcctg ctgtccaagc cccgggccga tcaccacaac gtcagcccag gtcaggctct
     1501 cttccagcga ctgaggcgtg agttcatgta ccatcagttc cgggcgggcc gtcagcaacg
     1561 acgcgatgtt ttcaccgcga gtcagtactc tgaccaaccc agcccccgta cgcagcgccg
     1621 cctcgccagc catccgaatt gcacccgctg ttccctgatc gccgccgata atcgccagac
     1681 gaccatgatc gcccttatac gaggtcggtc gacgcggcgt taaccattgc cccaactgcg
     1741 tcgcgtcaaa acgccggagc ggcggcgtct ggctcgccag ccagccttcc agccccaacg
     1801 cgtcataatg caatatgccg gtaacgtcac gcgctttgcc ggtcagcagg cctggtttca
     1861 gggcgataaa cgtgaccgta tgcgcggcgc ttatcaccgc gccaggcgtg gtgcccgttt
     1921 gcgccagcag gcctgacggg atatcgacgg cgacaaccgg cgcaggatgg gcgttcgcct
     1981 gttcaatcag accggctacc ggatcgcgcg gctcctgggc tatgccggtg ccaagcagcg
     2041 cgtcgataat cagatccgtc gcttccggcc agataatatc ggcagcatgg ataatgccgc
     2101 cggcattcag ccaggcatcg cgcgcctgcg ccgcttcttc aggtaacggt ttgtcgctct
     2161 cctgcgccag caacgttacg ctaatgcccg ccgcttgcgc tagtcgcgcc acgacgtaac
     2221 catcgccgcc gttgttgcca tgaccacaca acaccagcca gtgtcgggcg tcagggtaac
     2281 tgtcacgggc tacccgaaat gccgcgtcgc cagcgcgcag catcaattca tagagtgtga
     2341 gtccgaaggc atccgccgca tcgcgttcca gccgtttgat gtcatcggcg ggccaaatgg
     2401 agtgtggtat acttacaggg tttttcttca tgttatggtc catcatgtca aagcccctcg
     2461 atctcaatca gttagcgcaa aatattaagc agtgggggct ggagctgggc tttcagcagg
     2521 tcggtattac tgataccgat ctgcgcgcat ccgaacctgc gctgcaggcg tggctggaca
     2581 aacaatacca cggcgagatg gcatggatgg cgcgccacgg tatgatgcgc gcccggcctc
     2641 atgaactctt acccggtacg ctacgtgtca tcagcgtgcg catgaactat ctgcccgcca
     2701 acgccgcgtt tgccagtacg ttgaaggatc ccacgctggg ctacgttagc cgatatgcgc
     2761 tggggcgtga ttatcacaag ctgttacgca gccgtcttaa aaaactgggc gagcagatcc
     2821 agcagtactg cggttcgctg aattttagac cgtttgtcga ctctgcgcct attcttgaac
     2881 gcccattagc ggaaaaagcc ggacttggct ggacgggtaa gcactcactt atccttaatc
     2941 gggaggcggg ctcattcttt ttcctggggg aattgctgat tgatttaccg ctgccggtcg
     3001 accagccggt cgaggaaggt tgcggcaaat gcgtcgcctg tatgaccatt tgcccgaccg
     3061 gggcgattgt cgaaccgtat acggtggacg cgcggcgctg tatttcttat ctcaccattg
     3121 agctggaagg cgctattccg gaagcatttc gcccactgat aggtaaccgt atttacggct
     3181 gcgatgactg ccagcttatc tgtccgtgga atcgttactc tcagttgacc gacgaagcag
     3241 attttagccc acgcaaggcg ctgcataacc cagatttgct tgagttgttt agctggagcg
     3301 aagcgcagtt tctgaaagtc actgaaggtt ctgcgattcg gcgcattggc catttacgct
     3361 ggctgcgcaa tgttgccgtt gcgctgggga atgcgccgtg gagtaatgcc gtcattacgg
     3421 cgttggaaag ccgcaagggt gagcatccac ttcttgatga gaatatcgaa tgggcgattg
     3481 cgcaacaaat tgaaaagcgg aacgcctgca tcattgaagt gcagctaccg aaaaaacagc
     3541 gtctggtcag ggtgattgaa aaagggctgg tgcgcgatgc ctgaattatt cacaggctgt
     3601 gtataaaaat aaaaacacat tgcgattcaa gagggaaaaa aggaacagac aataacgcta
     3661 acgttttgaa atcttatttt ttctatattt ttcagtaaat tatagaaatt ctacgcgtca
     3721 ggtataattt tttgcattcc aggagtaatg ggccgtcctg tggataagtc tgtttacaag
     3781 gatctgacga aagcggaaca aaacgtgccc caacgcgata ttcgttgtgg ataattttac
     3841 tgtagataag aattggagcg ggaaacgaga ctcgaactcg cgaccccgac cttggcaagg
     3901 tcgtgctcta ccaactgagc tattcccgca taatcttcgt ctttcgaacc gctactgcct
     3961 tggctgcctt cactcgcctg agtcacttac ttcagtaagc tcctgaggac tcattcagtt
     4021 gccgccttgt cgcaattcga aatcctgcga ttggtggttt gtacttaaca agtactttca
     4081 aattttggag cgggaaacga gactcgaact cgcgaccccg accttggcaa ggtcgtgctc
     4141 taccaactga gctattcccg caaatttgtt gctgtcgtaa ttcgcatttc tgcgtcgtta
     4201 cgggaggcgc attatacgag aaatccattt agctgcaagc ccctgaacgc attttttcgc
     4261 gatttttgtt tgaatgctga ttaaatcacc aaacaagaca aaaaacgagc aaagcgtgcg
     4321 ctatgcaaca aaaaactttt cacgccacgc ctaaaggcac agaatcagaa tagcaccctg
     4381 cgccaaaaaa agaatagcac ggtgaccaca acatccaatt gatatcaggg atcaagatga
     4441 aaaaaaactt attgtcatgc tgttagccag cctctccgtt cacgctgctt ccgtttccgc
     4501 cagaacatta cattttggca cctccgccac ctatgcgccc tatgagtttg tcgatgccga
     4561 taataaaatt gttggtttcg atattgatgt cgccaacgcg gtctgcaaag agatgcaagc
     4621 ggagtgctca ttcactaacc agagctttga tagtctgatc cccggcctac gtttcaaaaa
     4681 gtttgatgcg gtgatcgccg gtatggatat gacgcccaaa cgtgagcagc aggtctcctt
     4741 tagccaaccc tattacgaag gtttatcggc ggtagtcgtc acgcgtaaag gggcttatca
     4801 cacttttgcc gatctgaaag gcaaaaaagt cggactggaa aacggtacaa cgcatcagcg
     4861 ctatttgcag gataaacaac aagctatcac gcctgtcgcc tatgacagct atctaaacgc
     4921 ttttaccgat ctgaaaaata accgtcttga gggcgtgttt ggcgatgtcg ccgcgattgg
     4981 taagtggcta aaaaacaatc cggattacgc catcatggat gaacgcgcca gcgatcctga
     5041 ctactacgga aaagggttag gcattgcggt acgcaaaggc aacgacgcgc tattgcaaga
     5101 aattaatgcc gcgctcgaca aggtgaaagc gtcgccggaa tatgcgcaaa tgcaggagaa
     5161 atggtttacg cagtaattca gtggcgggag agctgccgga tgagacgctc tggcgttgcc
     5221 atccggcatg ttacgcctca cagcttaatg aaatgctcgc ggtagtaagc cagctccgcc
     5281 accgactcgc gaatatcatc catcgcctgg tgcgtgccct gcttggtaaa gccggccaga
     5341 atctccggct tccagcggcg cgccagttcc ttgagcgtac tgacatccag atagcgatag
     5401 tggaagtaag cctccagttc cggcatatat ttaaacagaa aacgacgatc ctgaccgatg
     5461 ctgttaccgc aaatcggcga cttacccgca ggcacccacg ttttcagaaa ttcaatcgtc
     5521 gccagttcag cgtctcgttc gcccatcgta cttgctttaa cgcgatctac caggccgcta
     5581 ccggtatggg tgcgcacgtt ccagtcatcc attaacgcca gttgcgcatc ggattgatgt
     5641 accgcaatcg tcggcccttc cgccagaatg ttcaggctgg catccgtcac tagcgtggct
     5701 atctcaataa tgcgatcgcg ttcggggtcc agacctgtca tctccagatc gatccaaatc
     5761 aggttgtttt catcggcact catgctattt tccacccttc agaggtcaca ttcactgtga
     5821 ctatattcat ctacaattgc gtgtatcata gatgttttgc ccactatggg cgaccaggag
     5881 ccagtacgat tgagcaaaaa taaactctcc aaaggccagc agcgccgtgt gaacgccaat
     5941 caccagcgtc gtttaaaaac gtccgcggag aaagccgact acgatgacaa cctgtttggc
     6001 gagcctgcag aaggtatcgt cattagccgt tttggtatgc atgccgatgt ggagtctgct
     6061 gacggcgagg ttcaccgctg caatatccgc cgcactatcc gttcgctggt gacgggcgat
     6121 cgcgtcgtct ggcgtccggg caaagccgcc gcagagggcg tcaacgtaaa aggcatcgtt
     6181 gaagcggtgc atgagcgcac ctcggtattg acgcgcccgg acttctacga cggcgtgaag
     6241 cctattgccg ccaacattga ccaaatcgtt attgtctccg cgattttgcc ggagctgtcg
     6301 ctgaatatca tcgatcgcta tctggtcggc tgtgaaaccc tacaggttga gccgcttatc
     6361 gtactcaata aaattgatct gctggacgac gaaggtatgg acttcgttaa tgagcagatg
     6421 aatatctacc gcaatatcgg ctatcgcgtg ctgatggtct ccagccatac gcaggatggt
     6481 ctgaaaccgc tggaagaagc gttaaccggt cgcatcagta tttttgccgg gcagtccggc
     6541 gtcggaaaat ccagtctgct aaacgctctg ctcggcttac agaacgagat tctgacgaac
     6601 gatgtgtcga atgtctccgg tctgggtcaa cataccacta ccgctgctcg tctgtatcat
     6661 ttcccgcatg gcggcgatgt cattgattcc cccggcgtgc gcgagttcgg cttatggcat
     6721 ctggagccgg aacaaatcac ccagggcttt gtcgaatttc atgactattt gggacattgt
     6781 aaataccggg actgcaagca tgacgccgat ccaggctgcg ccattcgcga ggcggtagag
     6841 aacggcgcta ttgcggaaac ccgtttcgaa aattatcacc gaattcttga aagtatggcg
     6901 caggtaaaaa cgcgtaaaaa cttttctgat acggacgact gacagatacg ctaggcgtcg
     6961 ttagaatcgt cccctttttt caggataccg gtataactgc cggttcagga acaacaatgg
     7021 cctggaggct accttgttaa actcatttaa actttcgcta caatacattc tgccgaaact
     7081 atggctcact cgcctggcgg gctggggcgc aagcaaacga gcaggatggc tgacaaaact
     7141 ggttatcgat ctcttcgtaa agtattacaa agtcgatatg accgaggcgc aaaaaccgga
     7201 taccgccagc tatcgtacgt tcaatgattt ctttgttcgt ccgctgcgtg atgacgtgcg
     7261 tccgctcaat accgatccta acatcctggt gatgcctgcc gacggcgtga taagccagtt
     7321 gggtcgtatc gaagaagata aaattttgca ggccaaaggc cataattaca gccttgaagc
     7381 gttgctggcg ggtaactacc tgatggcgga taagttccgc aacggcacgt ttgtgaccac
     7441 ttacctctcc cctcgcgact accatcgcgt gcatatgcca tgcaacggca tcctgcgcga
     7501 aatgatctac gtgccgggcg atctgttctc cgttaactat ctgaccgcgc aaaacgtccc
     7561 caacctgttt gcccgcaacg agcgcgttat ctgtctgttt gataccgagt tcgggcctat
     7621 ggcgcagatt ctggtcggcg caactattgt cggcagtatc gaaaccgtct gggcggggac
     7681 cattaccccg ccgcgcgaag gcatcatcaa gcgctggacc tggccagaag gcgaacatga
     7741 agggtctgtc gccttgttga aaggccagga gatggggcgc tttaaactgg gttccacggt
     7801 catcaactta tttgcgccgg ggaaagtgaa tctgatcgcg tcgctggcaa gcctgtccgt
     7861 taccaaaatt ggccaaccgc tggcgacgtc gaccgaaaca ttcgtcgcgc cggaggtgga
     7921 acctgctccg ctgccggcag aagaaattaa agctgaacac gacgccagcc cgctggttga
     7981 caataaaaaa gacgacacct aatcaagaga gaatgctgac gtgcgcctga ttatcgcttt
     8041 tctgatggcc tggtgcctca gcacgggggc gttcgccgca acggcccccg acgccaaaca
     8101 aatcacgcag gaactggagc aggcaaaagc ggcgaaaccc gctcagccgg aagccgttga
     8161 ggcgctccag actgcgttaa acgcgcttga agagcgaaaa ggctcgcttg agcgcgcgaa
     8221 acaatatcaa cacgttattg ataatttccc taagctatcc gccaccttgc gcgcccagtt
     8281 gaataatctg cgcgatgaac ctcgcagcgt accgccagag atgtccaccg aagcgttaaa
     8341 tcaggagatc ttgcaggtta gcagccagct actggataaa acccgcgagg cgcaacagga
     8401 gcaggagcgc gtcagggaga tcgccgactc gctcagccag cttccccaac agcaaaacga
     8461 cgcccgccgc cagcttaatg agattgagcg acgactcggc gccgcaggcg gaagtgccgc
     8521 gcttagccag gcgcaaagtc tcagtatgca ggcggagtcc gccaaactaa aagcgttagt
     8581 cgacgaactg gagttggcgc aactgtccgc caacaaccgg caggaactgg ctcgtctgcg
     8641 ttccgagctg gcggaaaaac agagtcagca attggatgcg tatcttcagg cgctgcgcaa
     8701 tcagctcaac agcctgcgtc aacgtgaagc ggaacgcgcg ctggaaagca ctgagctgct
     8761 ggcggaaaac agcgccggtt tgccggaagg catcgtcgaa caatttaaag tcaaccgcgg
     8821 gctgtcacag gcgctcaatc aacaagcgca gcggatggat ctggtcgcct cgcagcagcg
     8881 acaggccacc agccaaacgt tacaggtgcg tcaggcgctc aatacgctgc gggagcagtc
     8941 gcaatggctt ggcgtgtcca acatgcttgg cgaagcgctg cgcgcgcagg tcgcccgtct
     9001 gccagagatg cctaagccgc agcagcttga tacggaaatg gcgcagctac gcgttcaccg
     9061 tatgcgctat gaagaattac tcaataagca accgcagcta cggcaaatac gtcaggccaa
     9121 tggacaacca ctgaccgccg agcaaaacca gattcttgac gcccagcttc gcactcagcg
     9181 cgagctgctc aactctttgt tacagggcgg cgacacgctg atcctggagt tgaccaaact
     9241 gaaagtctcc aacagccaac tggaggatgc gcttaaagag gttaatgaag cgacccaccg
     9301 ttatctgttc tggaccgctg acgttagccc gctatcgctc tcctggcctg ttgatttggt
     9361 tcaggattta cgtcggctta tctcattaga tacgtttaat cagttaggta aagccagcat
     9421 catgatgctg accagcaaag agacgctact gccgttattc ggcgcgctgg cgctggtcgg
     9481 gtttagcctc tattcacgcc aacacttcaa ccggttcctt gagcgctcgg cctcgcgcgt
     9541 cgggaaagtc acccaggatc acttctcgct gacgctgcga acggtgttct ggtcgattct
     9601 ggtcgcctcg ccgctgcccg tcttgtgggc gacgctcggc tatggtctac aggaagcctg
     9661 gccgtatccg ctggccgtcg ccatcggcga tggcgtgacg gcgacagtac cgctgttgtg
     9721 ggtagtcatg atttgcgccg cttttgcccg ccctaatggt ctgtttgtgg cgcatttcgg
     9781 ctggccgcga aaccgggtag cgaaagcgat gcgctactac ctgatgagca ttgggctgat
     9841 cgtgccgctc attatggcag tgatcatgtt tgataatctt aacgatcggg agttttccgg
     9901 ctcgttgggc cgcctttgct tcatcctgat atgcggcgcg ctggcgctgg tcacgctgag
     9961 tctgaaaaaa gcgggcatcc cgctctatct tgataaagaa ggcaacggcg acaacatggt
    10021 caacagcctg ttgtggaata tgttgatggg cgcgccgctt atcgcgattc tggcggcggc
    10081 ggtgggttat ctggccacgg cgcaggcgct actggcgaga ctggaaacct cggtcgccat
    10141 ctggttcctg ttgctggtca tttatcacgt cattcgccgc tggatgctga tccaacgacg
    10201 ccgactggct tttgaccgcg ccaaacatcg tcgggcggaa atgctggcgc agcgcgcgcg
    10261 cggcgaagaa gaaccggcgc actcctccag cctggaaggc gcggtcgaca tcgatgaaag
    10321 tgaaatcgat cttgacgcta ttagcgctca gtcgctgcgt ctggttcgct caattctgat
    10381 gcttatcgcc ctgctatcgg taattgtact gtggtcggaa atccactcgg cattcggctt
    10441 cctggagaat atttcgctgt gggatgtcac ctctacggtg caaggcgtgg aaagtctgga
    10501 gccgattacc ctgggggcgg tgctcattgc gattctggtc tttatcatca ccacgcagtt
    10561 ggtgcgtaat ctgcctgcgc tgctggagct ggcgttatta cagcatctcg atttaacgcc
    10621 aggtaccggt tacgccatca cgaccatcac caaatatctg ttaatgctga ttggcgggct
    10681 ggtcggtttc tcgatgatcg gcattgagtg gtcgaagcta caatggctgg ttgccgcgct
    10741 cggcgttggg cttggttttg gcctgcaaga aattttcgct aactttatct ccggcctgat
    10801 tattttgttt gaaaagccga ttcgtatcgg cgatacggtg accattcgcg atctcaccgg
    10861 cagcgtgacc aaaatcaata cccgcgccac caccatcagc gactgggatc gtaaagagat
    10921 tatcgtgccg aataaagcct ttatcaccga acagtttatc aactggtcgc tgtctgactc
    10981 cgttacgcgc gtggtgttaa ccatcccggc gccggcggat gccaatagcg aagaggtgac
    11041 gcaaattctg ctgacggcgg cgcagcgctg ttctttggtg cttgataacc cgccgcctga
    11101 aatctttctg gtggatctcc agcagggtat tcaaattttt gaactgcgta tctatgccgc
    11161 ggaaatggga caccgtatgc cattacgcca tgagatccac caattgattc tggctggctt
    11221 ccgcgagcac ggtattgata tgccgttccc gccgttccag atgcgtctgg agagtctcgg
    11281 cggtaaacaa acggggagaa cgttaacgtc agcgggtaaa accagccgcc cggcggggag
    11341 tttgtagcgc atgatcccgg caagaaatgc cggatgcgcc ccgtcgggtc ttatccggcc
    11401 tacgggccga caattaatct gtaggcccga taagcttgcg ccatcgggca tttcatcgca
    11461 actcacagac attttcggac ttattatgcg tccagatcgg caacaggcag gttaatttcg
    11521 ctatagcgca ttcggaataa atcgccgtaa cccaccagtt ctccgcgaaa tacgaggcat
    11581 cttacaacat acgcgcaata aatatccgac acatgtttcc acttatcctc atcgcgatcc
    11641 cttaacgtgc caatagtcat tcctactacc atcgcaacct ttcgacgtgc aacatgaacg
    11701 gaagaaagaa taaccttttc tatttcaagg atatcttccg gagtaaaatt gagtgcccta
    11761 atctcatctt ccgtgataat cgggtctctc gaactatcat tcatcacgtt ctccataggg
    11821 caataaacgc cggatgcgac ccgtggggcc ttatccggca tacggccttt actccgccgc
    11881 ccactccgga tcagcgctca tgcggctgct gtaattctga taaatcgcca tcgccagcag
    11941 cgagaagaag atcgggccgc cgatcatcca caaggcgctg tcccagtccc cagcttcaat
    12001 cactggctgg atgatggtaa agacgttggc aaacgtcacc accagcacca caacacccgt
    12061 cgcgaccagg gtagaggctt tggttttaaa gagaacaaat ggccgctcca gatcctgacg
    12121 cgctttaaag aagggaaatg ccagcgcaag gaacaggtat ggcaaggtca ttgagacgtt
    12181 cgccatcagc gtgagtttgt tataaaacgc cgatgcggtg tcaccgccaa aagagaccag
    12241 caaaataaac agactcacca gcacgcactg tagccacata gcggtcgccg gcataccgtt
    12301 agcgttcagt gtcgtcatcg gcgcgggcca caacgctttt ggcgtcccct gaataatggc
    12361 tttcagcggt gaatagctca acgtaaaaaa cgcgccggta taagccagaa acatagaaag
    12421 gccggtgata cgcgcaaacc agacgcccac cgtcatcgca gcttccggag aaaggtttaa
    12481 cgcgttacct aatgtcgtgc ctaaactcga catcagaatg taggtgatat tccctaagtt
    12541 aacggcgcta ttacttaata tctgttgcca gttagtactg acgccccata aaaagatcgc
    12601 caaagaataa ccaattgaaa tcacaatggc cgcgaaaaca atacctttcg caaaattctt
    12661 ttccggtttc tcggttttat ccaccagtcc gccgacagcc tcaataccgc cgtaagcaaa
    12721 aatagcaaat accacaaatg acaacattgc caggccggag tgataacccg gattcggtga
    12781 cgaggtaaaa ttaatctctt gtgcaaaatg cccaccattt aataacaaaa tagcgacact
    12841 cactaacaat aaaactaaat taagacacat tacggcaata cctccgaccg ccgtaattcg
    12901 cgcaatttta ttgatccctc tggcggcgac acacgtcacc agaatcatcc agccgacggc
    12961 gagcagcccg acaacctgcg taggctcaag ccctgcaata cgccagtgct gcgtcatatc
    13021 ggcgccaaaa acaaaagtag aaaacggtac ccaaattttt gccgccgtac ttaccatcca
    13081 tatgacatac gatgaaaacc acataaacgt gccaataaac gcgtaacgtg gccccacgct
    13141 attattcatc cacgaataga tcccgccctc ttctttgcga taagcggaac ccatttcagc
    13201 catcattaag gcgaatggaa taaaaaacag caaggcagaa aatatatacc acgggattgc
    13261 gctatacccc attaaataaa acgccgacgg gctattcgca aaaccaaaaa cagaagtaaa
    13321 aatcatcagg ataagcccaa taaggctcat cttttttatc gtgtgggtca ttcaaccatc
    13381 ccttacgctc gagcgcgttt gccagacgcc gctcaccgat tgacgccgcc ttctttttta
    13441 cgaaggtcag cgataaaaaa atcaacacag gattgatacc taaatggcat caaagttcca
    13501 gccttatgtt gtggcaaaca gaggataatt gaaaaaatat gctacaaaat ggcgcttatt
    13561 tcgccatttt atctcgcgaa agagtgaatt tcagatttac gcccgatcga ccgtaaaagc
    13621 aatcacgtcc gccaggcttt ctgctcccag cgccagcatc accagacgat caacacccag
    13681 cgccacgccg gaacaatccg gtagaccggc ggccagcgca tccagtagat tttggtcaat
    13741 cggctgctgc ggcagaccgc gcgcggcgcg cttacgattg tcctgttcaa agcgctgttg
    13801 ttgctcacgt gcgtccgtca gttcgtggaa accattcgcc agctcaatac ctttgtagta
    13861 cacctcaaag cgctcggcga cgcgatgatc ctcggtactg atttgtgcca gcgatgcctg
    13921 actggccgga aagtgataaa taaaggtcgg cttttcttta cctatatgcg gctcaacccc
    13981 catcgtgaac agcagttgca gcaacgtatc acggtcttct tccgtatcgg cgatattgct
    14041 taaatcaagc tttgccgccg cctcacgcag ctgcgtttta tctgctgata acgggtcaat
    14101 ctccagatgg cgcagaaacg cctgttgata ggagagactt tccgcaggtt gacaatccag
    14161 cacttgctga agcaaatcat ccacttcatt catcaggcgg tacatatcgt aatgcgggcg
    14221 ataccactcc agcatggtga attccggatt atgatgtcgt cccatctctt cattacggaa
    14281 actgcggcat agctggaaaa ccggaccgca ccctgccgcc agcaggcgtt tcatatggta
    14341 ttccggactg gtcattaaat agaggttgat cccctgggaa tggccaggtc cgacgaaacg
    14401 cgtttcgaac gggaacagat gaatgtctgt gaccgtcgcc tgactcatgc agggcgtctc
    14461 aacctcaagc actccacgat cggcaaagaa acgacggatt tccgccataa tcgccgcacg
    14521 ttttaataaa ttggggatgg acgcgctcgg ctgccaggtt gccgtttcgc tcatgattct
    14581 ttctccagtt taagacaagg tcacgaagtc tactcgcaac gcgcgggcga aacaaatttt
    14641 gcgcaggcgt atcgggtgcc ttctggaggg taaaaaaagt gatttcagat ggtttagtaa
    14701 ttaaattaat caaaatcaat gataattcat ccctctgata cgctaaaaaa atcgaacacg
    14761 tcaaatttcc ctcacatccc tgagactata ctgttgtacc cataaaggag cagtggaaac
    14821 gcattcatac ttcgcagaac ccagaggctt tatctggctg cgcgagggtg aaattacaat
    14881 aatctggagg aatgtcgtgc aaacctttca agccgatctt gccattatag gcgctggtgg
    14941 cgcgggatta cgtgctgcaa ttgctgccgc acaggcgaat cccaatgcta aaatcgcact
    15001 gatctcaaaa gtgtacccga tgcgcagcca caccgtcgct gccgaagggg gttcagccgc
    15061 tgtcgcccag gatcatgaca gctttgacta ccattttcac gatacggtag caggcggaga
    15121 ctggctgtgt gagcaggatg tcgtggatta ctttgtccac cattgtccca ctgagatgac
    15181 gcagctggag caatggggct gcccgtggag ccgccgtccg gacggtagcg ttaacgtgcg
    15241 tcgcttcggt ggtatgaaaa tcgagcgtac ctggttcgcc gcggataaaa ccggcttcca
    15301 tatgctgcat accctgttcc agacttccct acagttcccg caaatccagc gctttgacga
    15361 acattttgtg ctggatattc tggttgatga caaccatgcg cgcggcctgg tggcaatgaa
    15421 catgatggaa ggcacgctgg tacaaatccg cgccaacgcc gtggtcatgg cgacaggcgg
    15481 cgcaggccgc gtataccgct ataacaccaa cggcggcatc gtcaccggcg acgggatggg
    15541 catggcgctg agccacggcg ttccgctgcg tgatatggaa ttcgttcagt atcacccgac
    15601 cggcctgcca ggttccggta tcctgatgac tgaaggttgc cgcggcgaag gcggtattct
    15661 ggtcaataaa aatggctacc gttacctgca agactacggc atgggccccg aaacgccgct
    15721 gggcgagccg aaaaacaaat atatggaact ggggccgcgc gacaaagtat cccaggcttt
    15781 ctggcacgaa tggcgtaaag gcaacaccat ctccacgccg cgcggcgatg tggttcacct
    15841 cgacctgcgt catctcggcg agaagaaact gcatgaacgt ctgccgttca tttgcgaact
    15901 ggcgaaagcc tatgtcggcg tcgatccggt taaagaaccg attccagtac gtccgaccgc
    15961 gcactacacc atgggcggca ttgaaaccga ccagaactgt gaaagccgtg tcaaagggct
    16021 gtttgccgtt ggcgaatgct cctctgttgg cctgcatggc gcgaaccgcc tcggttccaa
    16081 ctcactggcg gaactggtgg tgtttggtcg tctggctggc gaacaagcaa tggaacgcgc
    16141 tgctacggca ggcgccgcaa atagcgccgc gctcgacgcc caggttgccg atattgaaca
    16201 gcgtctgaaa aatctggtga accaggaagg caacgaaaac tggtcgaaga tccgcgatga
    16261 gatgggtctg tctatggaag aaggttgcgg tatttaccgt accccggaac tgatgcagaa
    16321 aaccgttgat aaactggccg agcttcagga acgtttcaag cgcgtacgta tctccgatac
    16381 ttccagcgtg ttcaacactg acctgctgta taccatcgaa ctgggtcatg gtctgaacgt
    16441 ggcggaatgt atggcgcact ctgcgctggc gcgtaaagag tcccgcggcg cgcatcagcg
    16501 tctggatgaa ggctgtaccg agcgcgacga tgtgaacttc ctcaagcaca ccctcgcctt
    16561 ccgcgatgct gatggcacga cccgcctgga atacagcgac gtgaaaatca ccaccctgcc
    16621 gccagccaaa cgtgtttacg gcggtgaagc ggaagcagcc gataagaagg agaaggcgaa
    16681 tggctgagat gaaaaacctg aaagttgagg tggtgcgcta taacccggaa accgataccg
    16741 cgccgcacag tgctttctat gaagttcctt atgatgaaac aacatcgcta ctggacgcgt
    16801 tgggctacat caaagataac ctgtcgccag acctgagcta ccgctggtcc tgccgtatgg
    16861 cgatctgcgg ctcctgcggc atgatggtca acaacgttcc taaactggcg tgtaaaacct
    16921 tcctgcgcga ttacaccaac ggtatgaagg tggaagcgct ggcgaacttc ccgattgagc
    16981 gcgatctggt tatcgatatg acgcacttta tcgaaagcct ggaagcgatc aaaccgtaca
    17041 ttattggcaa ctctcgcacg ccagatcagg ggccgaatgt ccagaccccg gcgcaaatgg
    17101 cgaagtatca ccagttctcc ggttgcatca actgtggtct gtgctatgcc gcgtgcccgc
    17161 agttcggtct gaatcctgag tttatcggac cggctgcgat tacgctggcg catcgctata
    17221 acgaagatag ccgcgatcac ggtaagaagg agcgtatggc gcagttgaac agtccgaacg
    17281 gcgtatggac ctgtactttc gtgggctact gctccgaagt ctgtccaaaa catgtcgatc
    17341 cggctgcggc cattcagcag ggtaaagtgg aaagctcgaa agactttctt atcgccaccc
    17401 tgaaaccacg ctaaggagtg caacatgacg actaaacgca aaccctatgt gcggccgatg
    17461 acgtccacct ggtggaaaaa actgccgttt tatcgctttt atatgctgcg cgaaggcaca
    17521 gcggtgccgg cagtctggtt cagtattgaa ctgattttcg gtctgtttgc gctcaaacac
    17581 ggcgcggaat cctggatggg attcgtcggc tttttacaaa acccggtggt agtgatctta
    17641 aacctgatca ccctggcggc cgcgctgctg cacaccaaaa cctggtttga actggcgccg
    17701 aaggcggcca atatcattgt aaaagacgaa aaaatggggc cagagccaat catcaaaggg
    17761 ctttgggtgg tcactgcggt agtcaccgta gtcattctgt atgttgccct gttctggtaa
    17821 ggagtcccgg atgattaatc caaacccaaa acgttctgat gaacccgtat tctggggact
    17881 gtttggcgca ggcggtatgt ggggcgcgat catcgcgccg gtgatcgtgc tactggttgg
    17941 catcatgctg ccgctggggc tatttccggg cgatgccctg agttttgagc gcgtactgac
    18001 gttcgcccaa agctttattg gtcgcgtttt tctgttcctg atgatcgtgc taccgctatg
    18061 gtgtggccta caccgtatgc accacgcgat gcatgacctg aaaatccacg tgcctgcggg
    18121 caaatgggtc ttctacggtc tggcggcaat cctgaccgtt gtgacggcga ttggcgttat
    18181 cactctctaa gttgccacga cgccctctta tctacccgat aagagggcat tttttctttt
    18241 cctgcctctc attttcccgc caggttctac acttagaaaa aacactggaa ggaaaaacgc
    18301 tatgcgcttg ctgcccgtcg ttgctgcggt tactgcggca tttttggttg tcgcctgtag
    18361 ttcgcctacc ccgcctaaag gcgttaccgt ggtaaataac tttgatgcca aacgttacct
    18421 cggcacctgg tatgagatcg cacgcctcga tcatcgattt gaacgtggac tggaacaagt
    18481 cacggccacc tatagtctgc gtgacgatgg cgggattaat gtcatcaata aaggctataa
    18541 cccggctcgg gaaatgtggc aaaaaacaga aggcaaagcg tattttaccg gtagtccaaa
    18601 ccgcgccgcg ctcaaggtct cttttttcgg cccgttctac ggcggctata acgtgattgc
    18661 gcttgaccgg gaataccgtc atgcgctggt gtgcggcccg aatcgcgact atctgtggat
    18721 actctctcgc acgccaacgc tttctgagga aataaaacag caaatgctgg ccgtcgcgac
    18781 ccgggagggg tttgacgtca ataaattaat ttgggtaaaa caatcaggtt cgtagcaatg
    18841 tcagcgacga attaatgcgc actgagtttt agcccaatga tacccgcgac gatcaagcca
    18901 agactgagca aacgcgccgg tgaggcagac tcgcccagca gaaggatacc ggtgattgcc
    18961 gccccaacgg cgccgatgcc ggtccagatg gcgtacgccg ttccaacagg cagcgttttc
    19021 attgcccagg aaagtaacgc catactgata accatggccg taatggtgat aatactgggg
    19081 gtcagacgag aaaaaccgtg ggtatacttc aggccgacag cccataccac ttcaagtaaa
    19141 ccagcgatta ataaaatgat ccaggacata gcaggctcca gataattaat ggggccgtcc
    19201 ccggtgagaa tagcgtttac aggtcgtcct gtaacgtata cggatgaaaa gccattcttg
    19261 cctgagagaa aatgaatttc aaccttttta tttttttccg tctaaaggcg ggaattggcc
    19321 cttttaagcc gcgtagtttt cgcatttagc gcccacagga gttctctatg atggaacgcc
    19381 ttctgggaaa gaaagtgctt tactacttcc gggtacaaaa aactatgttg aaaattttag
    19441 tgatagaccg atgccacttt acccgtacgg gcatggaggc ctggcttaat cacactgatg
    19501 tgctcagttc ttcactgctg gtatccggga tgaataacct tatactggcg aaagaacata
    19561 ttctgcaatg gaagccccat ctggttatcg ctgatttata tggttttctc aacgatgcct
    19621 tacccgagca gcctatcaat gcattttttg ccgcctgcag gatgacgccg ttagtattat
    19681 tacagtcagg gaatatgccg tacagatcgc aatatgccag ccatgcggtg ttatctaaac
    19741 acacgccttt acatgagctt gcacaacgaa ttaaaggagc gctatatact catccactgc
    19801 aggaagcgcc ggaaagcgcc acgccattgc tctctccgca ggaggaaaaa gtgctcgcga
    19861 tgtggacgga aggcaccagc aataaagaga ttgcgtatgc gcttggcatt cacggaaaaa
    19921 cggtttacac ctataagcgt aatatccgta tgaaacttca tatggataac cggtattctc
    19981 cctttcttat gcttccggag aaaatcgatt aacggtacga cgccatgccg taccgttgat
    20041 gattactgct gagctctggt tgcagcgcca gagatcgcac taccaccgtc cgagatgtcc
    20101 tcgcccacgc cgcgcgtggt attacaagca gttaatacag tggaaagtac caaaacagaa
    20161 aagatcgctg caattgtctt tttaaccata atgtcttcct tttctagcca atgttgtttg
    20221 tgtatagcaa cttaataata gacaacatcc cagaaaatga cgggcgatcg actaatttta
    20281 ggaagacgag aagcgattag ctggctgcgc gggagatggc gtggccaaga tgctgaatat
    20341 cttcgccgaa gccgcgggcg gtattacatg ccgttaataa tgtgccggta agaagaacca
    20401 gcgcgacaag gccgataaag cgtttcatca ttgaggcgcg aaaaatagga tggcgcagca
    20461 tacgctgcac catttttccc gataacgtaa attattttac gcgggatacg tattcgccgg
    20521 aacgggtatc gactttgatc acttcgccaa tctgcacgaa cagcggaact ttaaccactg
    20581 cgccagtaga cagcgtggct ggtttgccgc cagtacctgc ggtatcgccc ttcagacctg
    20641 ggtcggtatc aacaatttcc agttcaacaa agttcggcgg agtgacagag ataggctgac
    20701 cgttccacag ggttacgatg cattccgcct gatccaacag ccattttgcg ttgtcgccaa
    20761 tagccttggc atctgcagac agctgttcga aggtttcgtt gttcatgaaa tgccagaact
    20821 caccatcgtt gtacaggtaa gtcaggttca tatcgactac atccgcgcct tcagcggaat
    20881 cggtcgattt gaaggttttc tcaacgcgcg tgccggtcag cagacggcgc agcttaacgc
    20941 gggcaaacgc ctggccttta cccggtttca cgaattcact ggattcaacc gcataaggtt
    21001 cgccatccaa catgatttta agaccggaac gaaaatcgtt gctatagtaa gtcgccataa
    21061 ggccctctga aattgttaac tggtagctaa gccacaaaat ggcgcatatt gtaaccctaa
    21121 ataccccatt gcgagaagat tggttagcgc aacttgccga tgttgtgacc aatcccgacg
    21181 aactgctgca tcttttacag attgaagctg atgaaaacct ccgggcaaga caggacgcca
    21241 ggcgcttgtt tgccctccgc gtgccgcgcg cttttattgc gcgcatggag aagggcaacc
    21301 ctgacgatcc tcttttacgt caagtgctga cgtcccggga tgaatttatt gtcgcccccg
    21361 gtttctccac cgacccgctg gaagagcaac acagcgtggt gccaggatta ttgcataaat
    21421 accaaaaccg ggcgctattg ctggtaaaag gcggatgtgc ggtaaattgc cgctactgtt
    21481 tccgtcgtca cttcccgtat gcggagaatc aaggcaataa gcgcaactgg acagtcgcgc
    21541 tggagtatat cgccgcacac ccggaactgg atgagatcat cttttccggc ggcgatccgc
    21601 tgatggcgaa agatcatgag ctggactggc tgctcacgca actggaagcc attaagcacg
    21661 tcaagcggct acgcatccac agtcggttgc ctatcgttat cccggcacgc attactgacg
    21721 aactggtcgc ccgctttgac cagtcatgtc tgcaaatttt gttggtgaac catatcaacc
    21781 acgccaatga agtggacgag gcgttctgcc tggcgatgaa gaaactgcgc cacgtgggcg
    21841 tcacgcttct caaccagagc gtcctgctgc gtggcgtgaa tgataacgcg caaacgctgg
    21901 cgaatctgag caacgcgcta tttgacgccg gcgtgatgcc ctattacctg catgtgctgg
    21961 ataaagtgca gggcgccgcg cattttatgg tcaccgatga cgaagcccgg caaatcatgc
    22021 gcgaactgct cacgctggta tccggctata tggtgccaag actggcgcgt gaaatcggcg
    22081 gcgaaccgag caaaacaccg ctggatttac agcttcggca gtgctaatcc tcgcgggcgc
    22141 gtcagggacg acgaaaaata ttaccgcgca atatcacgag gagattcccc cgcgattctc
    22201 ctcaccctct ggcgaggata aactaacctt cgttaaatac acctttccga tactctcttt
    22261 tcaataaagt ccgttttagg actcgcttag cgtgtactgc attttcgaat tatactggtt
    22321 ctccttttta taggacggca taaacaattt atatatcaaa tacattgcag taaaacattt
    22381 aattatttta tatttgtgga gaattgacat ggccttaacg attaagggac taaataccgg
    22441 cgttattcgt cacaatgata agtttatcgc gctggcgctt aaggtgaagt cactgagaaa
    22501 taaagaaaca ctgcttttct ttcctgtgct cgcgctgcga gacttgttga tcggccttga
    22561 acaccggctt tatttacaat actcgcttcc ggaacaagag caggaaaaac gccagaaagc
    22621 caaaagcagt catgtgctta aaatgcatga gaatattccg gcaatactcc gtgaagagct
    22681 ggaaaacgcc gatgttaatc agcgtgttga atctttagcg ttgagcgata atacagaaaa
    22741 agtattaacc tttacgttaa agctgcacaa tggtagccat cttgatttac aggtcggtga
    22801 gtggcaggtt gaagttctgg tgatggctat tattcacgcc attaataatg ccgaaatgcg
    22861 tgagctcgca ttgcgtattt cttcaatgct ggacttttta ccattatacg atgctgactg
    22921 cctggataac ggtaatatcg aattcgatac ctataaccag cctgactgga aacataatct
    22981 gtataaccat tatttagcgc tcgtttatcg ttatacggat gaggcaggac aatcgcatga
    23041 ttgcggcacc atcattaaga cccgcagtca gtcaggctct aaagaagctg aagcgatatc
    23101 acgccgcttg ctgaatttca gcccgcgtct taaaaagctg gaaggaaaac cgtgtaaggt
    23161 ttttgtcaga acgcttggaa ccggtaaagc agcgcgtctg acgcaagatc aatgtatgcg
    23221 cgcgttgcat aatctacgca tggcgtcatc gcaggaaaaa cgctaaccat atcgccctct
    23281 gaatctttca gagggcgtta cgattcagac atgtcaattc ggacatttat aaacctggcc
    23341 gttcatctcg ctggccgtcg ggacaaaact ggacaacatg ccctgcgacg gactacttac
    23401 gccatacagc acgtttccac ccatcgcggc cgcctgatta cgcagatcgt tcgctgcgcc
    23461 acgcattgag ccaccctctt cgccgtgctg gcctgaaaac cagttactct gtttaccagt
    23521 tgccgtacca ataagctggc attccgcgcc cggcttatct tcgacaaagc gtacattttg
    23581 gccggcagcg gtgagttcgt tgctggagct acaacccgcc atcagcagcg cggcgccaac
    23641 gatccctgct aaatatttca cgtgcatgtt attccccata atcaatgagc tggacgtttt
    23701 gtccgtatct gaatcttata ctaaaaagat gactaaaaga aaaacccccg gtcatttctg
    23761 cccgggggtt tctcaattct gggagataag cacccaaatc attctggttg caggaaggcg
    23821 gccagtttgt taatccccag tcacttactc aagtaagtga ctggggttag ccaacgcatc
    23881 tgcagcctga aggatgcagg gggtgggcaa ttacatcatg ccgcccatac cacccatacc
    23941 acccatgccg ccagcagcgc ctaaatcagg agcatcgctt ttcggcaggt cggtcaccat
    24001 gcactcggta gtgatcatca gaccagccac agaagccgcg tattgcagcg cagaacgggt
    24061 aactttggtt gggtccaaga tacccatatc gatcatgttg ccgtattctt cagttgctgc
    24121 gttgtaaccg tagttaccgt cgccgccttt aacggtgtta gcgacaacag acggctcttc
    24181 gccgcagttc agcacgatct gacgcagcgg agcttccatt gcgcgcagcg caactttgat
    24241 acccacgttc tggtcttcgt tctggccttt caggtcagca attttagaag caacgcggat
    24301 cagcgcaacg ccaccaccag caaccacgcc ttcttctacc gcagcacggg tcgcgtgcag
    24361 ggcatcttca acgcgggctt tcttctcttt catttcaact tcggtcgcag cgccaacttt
    24421 gattaccgca acgccgcctg ccagtttcgc tacgcgctcc tgcagttttt cacgatcgta
    24481 gtcggaggtc gcttcttcaa tctgctgacg gatctgagca acacggccct ggatggcagc
    24541 ttcttcaccc acgccatcaa tgatggtggt ggtgtctttg ttgatcacaa cacgtttcgc
    24601 ctgacccagg tcttccaggg ttgctttttc cagctccata ccgatctctt cagagattac
    24661 ggtaccgccg gtcagggtag cgatatcctg cagcatcgcc ttacgacgat cgccgaagcc
    24721 cggtgcttta accgcagcca ctttcacgat gccacgcatg gtgttcacta ccagggtagc
    24781 cagcgcttcg ccttcaacat cttcagcgat gatcagcagc ggtttgcctg cttttgcaac
    24841 ggcttccaga accggcagca tttcgcggat gttggagatt ttcttatcag ccagcaggat
    24901 gaacgggctt tccagttcta ctgcgccagt ttccggcttg ttgatgaagt aaggagacag
    24961 gtagccgcgg tcaaactgca taccttcaac cacgtccagt tcgtcctgca gaccggtacc
    25021 gtcttcaaca gtgatgacgc cttctttacc gactttatcc atcgcttccg cgatcagttt
    25081 acctacggtt tcgtcggagt tagcggaaat agtacctacc tgagcaatcg ctttagagtc
    25141 ggagcacggt acggacagcg ccttcagctc ttcaaccgca gcagcaaccg ctttgtcgat
    25201 accacgtttc aggtccatcg ggttcatgcc cgcagcaacg gctttcaggc cttcggtaat
    25261 gatggactgc gccagtacgg tcgcggtggt ggtgccgtcg cctgcagcgt cgttcgcttt
    25321 agaggcaact tctttcacca tctgcgcgcc catgttttca aacttgtctt ccagctcgat
    25381 ttcacgcgct acggaaacac catctttagt gatagtcggc gcaccgaaag atttatccag
    25441 aaccacgtta cggcctttcg gaccgagggt tactttcact gcatctgcca gtacgtttac
    25501 gccgcgcagc attttcacac gagcgtcgtt accgaatttt acgtctttag ctgccatttt
    25561 ctctttccct taaattcgta tgttcagtgt cgttcgcgga ttacgcttca acaattgcca
    25621 gaatgtcgct ttcagacatg atcaacactt cttcattgtc gatcttttca gatttcacac
    25681 cgtagccatc gttaaaaata acgatgtcgc caactttcac gtccagcggc tgtacagtac
    25741 cgttgtccag gatgcgaccc ttaccgacag cgatgatttc gccacgagtt gatttacccg
    25801 ctgcggaacc ggtcagtacg atgccgccag cagatttgga ctcaacttct ttacgtttga
    25861 cgatcacacg atcatgtaac ggacgaatac tcattgatag ctctcctttg agaaagtcat
    25921 tatcagttat gggtgacgcc ggcccgtaaa cggtttcccg gctggtgacc agagagatgg
    25981 ggatggggtt ttgccccttc aaggggggag atgaaaaaaa attcttctga gcgaaaaaag
    26041 cggtaaaaac gctacttatc tcacgtttac ccaaggttta gaacatcctg ctataagaaa
    26101 aggcgtgtgt gatacgctta aaaatgtctg tcgtcacctg acgttacaat gccgccggat
    26161 aatgagctga tgaatgaact aaaaaaagag cttgggttgg ttcagggcgt tatcttgtta
    26221 accacatcat tattagggac tggcgttttt gcgcttccgg agctggctgc gctggcggca
    26281 ggcgacatca gcctttgggc atggccgctg ctcattattt tgattttccc tattgcgatt
    26341 gtctttgctg tgctggggcg tcattttcca cacgctggcg gcgtagcgca ttttgtcggg
    26401 atggcatttg gcccgcgtct gcaacgggtg atcagttggc tgtttttatc agtcattcct
    26461 gttagttttc ccgcagcctt gcatattgcg gtgggtttcg gccaggcgct gtttggctgg
    26521 caaagcgaac agctcttatt tggggagctg ggtactctag gtttgctatg gtttatggga
    26581 tcgcgcggcg ccagctccag cgccaacctg caagccatta tcgctggatt aattatcgcg
    26641 cttattgccg ccattctgtg gaaaggcgcg attaaacctg cagatatcac cttcccagcc
    26701 gcaaacgaaa tcatcttttc ccggctgtgt accgccctgg cgatcatgtt ctggggattt
    26761 gtgggaattg aggcttttac gcatttgtcg tctgaattta aaaatcctga acgtgatttt
    26821 ccgcgcgcat tgatcattgg cctgatgctg gccggcgcca tttattggac ctgtaccgcc
    26881 gtggtgctgc attttggcgt ctatagcgac aagatagcgg caacagcatc gctaccgctt
    26941 attattgttc atctcttcgg tatccaggcg ttgtggatag cctgcattat tggttatctc
    27001 acctgctttg ccagcctgaa tatgtatgct cagagttttg cgcgtctgat atggacgcaa
    27061 atgcaatatc agcccgatca ctatctggct caactctctc ccgggcgcct tcccttgcac
    27121 gcgttaaacg ttattctggc ctgttgttgc gtgagttccc tggtcgtcta cgccctgaag
    27181 attaacctca atgcgctgat cgtctatgct aacggtattt ttattatgct ctatctactt
    27241 tgtatgctgg cgggctgtcg actgttgaaa gggcgctgct atgcactggc ggtgacgggt
    27301 tgtctactgt gcctgttatt gctagtaatg ctggggtgga aaagcttata tgccattatt
    27361 atgctggcag cattatggct gtttttaccg aagcgaaaac gcatggcgta agacgtatct
    27421 gttggccgga taacgcctca cgcgacttat ccgaccagca tctctacctt taatcccgac
    27481 gatcgtcttt atgttcaata cgatcgcgat cgtcatcttt acgctgatac tcgccgtcaa
    27541 atgtttcgcc accgccagta cccgcgctaa acccgccgcc cggcatccgg gaaaaacgta
    27601 aatgcggcag caacttcagc gtcaaatgtt tttgcactgg cggtaacaaa aggagaaggc
    27661 cgagaaaatc ggtgaaaaat cccggcaaca ggagcagtaa gccagcgatg atcagcgata
    27721 cactcttaat catttctgcc gccgggctct caccggccgc cattttttgt tgcatcagca
    27781 aaaagttttt aaaaccctgg ttacgtacca gcgacatacc gataacagac gtaaaaatca
    27841 ccaggattag cgtcatcagg acgccaagca catgggcgac ctggataaag atagaaatct
    27901 caatgtaaac atagagaaag acagctaaaa agggtatcca gcgcaaagga ctctcctgta
    27961 agtcatggcc gtctgcgacg accatttaaa tggggttgcg attcgcatcg attcgatatg
    28021 gtggtgcgta gcaaaatttc aagtggtttg tacacctatt ttaggtagta atactaaagc
    28081 ggtgacctat ttcacaaaat aataaataag gggtaaattc ccacacttta agtgatccag
    28141 attacggtag gaattctgaa ccagcatatg atctcgttta tcaggccgat ggaggggata
    28201 atcgtcggtc agaaaacatt cgaaatcaca tatatcctgt gtgttttaaa gtaaaaatca
    28261 ttggcagctt gaaaaagaag gttcacatgt caaacaacat tcgtatcgaa gaagatctgt
    28321 tgggtaccag ggaagttcca gctgaagcct actatggtgt tcacactctg agagcgattg
    28381 aaaacttcta cattagcaat aacaaaatca gcgacatccc tgaatttgtg cgtggcatgg
    28441 ttatggtaaa aaaagcggcg gcgctggcca acaaagagct gcaaaccatt cctaagagtg
    28501 tggcgaatgc catcattgcc gcatgtgatg aagtccttaa caacggtaag tgcatggacc
    28561 agttcccggt agatgtctac cagggcggcg cgggcacttc cgtcaacatg aataccaacg
    28621 aagtgctggc caacatcggg ctggaactga tgggtcatca gaaaggtgaa tatcagtacc
    28681 tgaacccgaa cgaccacgtg aataaatgtc aatccactaa cgacgcctat ccgacaggct
    28741 tccgtgtagc ggtttacgcc tctatcgtca aactgatcga tgccatcaac cagttgcgtg
    28801 aaggtttcga acgtaaagcg gttgaattcc aggacatcct gaaaatgggt cgtacccagt
    28861 tgcaggacgc cgtaccgatg acgcttggtc aagaattccg tgcgttcagc attctgctga
    28921 aagaagaagt gaaaagcatc gagcgtactg ctgagctgct gctggaagtc aaccttggcg
    28981 caacggcaat cggtactggt ctgaacacgc cgaaagaata ctctccgctg gcggtgaaaa
    29041 aactggctga agtcactggt ttcgcctgtg ttccggctga agatctgatt gaggcgacat
    29101 ctgactgtgg cgcgtatgtt atggttcaca gcgcgctgaa acgtctggca gtgaagatgt
    29161 ccaaaatctg taacgacctg cgcttgctct cttctggtcc tcgtgccggc ctgaacgaga
    29221 tcaacctgcc ggaactgcag gcgggctctt ccatcatgcc agccaaagtg aacccggtag
    29281 taccggaagt cgtaaaccag gtatgcttta aagtcatcgg taacgacacc accgttacga
    29341 tggcggcgga agccggtcag ttgcagttga acgttatgga gccggttatc ggtcaggcga
    29401 tgttcgaatc catccacatt ctgagcaacg cgtgctacaa cctgctggaa aaatgcgtta
    29461 acggcattac cgcgaataaa gaagtgtgcg aagggtacgt ttataactcc atcggtatcg
    29521 tcacttacct caacccgttc atcggccacc acaacggcga catcgtcggt aaaatctgtg
    29581 ctgaaaccgg taagagcgta cgtgaagttg tgctagagcg cggcctgtta acggaagccg
    29641 agctggacga tattttctcc gtacagaact tgatgcaccc ggcttataaa gctaaacgtt
    29701 atactgatga aagcgaacag taatcgtaca gggtagtacc aaagaggcac gtcacgatga
    29761 cgtgcctttt ttcttacaag aagttaccaa ataacaacaa tttaatatca acttgttaaa
    29821 caacaaggaa ggctaatatg atagttgtcg aacttatcat tgttttgctg gcaatctttt
    29881 tgggcgccag acttgggggc atcggtattg gattcgcagg tgggctgggt gttctggtac
    29941 ttgccgccat cggcgtgaag ccagggacaa ttccattcga tgtcatttcc atcatcatgg
    30001 cggttatcgc cgcgatctct gctatgcagg tcgcgggcgg tctggattat ttggtaaacc
    30061 agacagaaaa actgctgcgt aagaacccga aatacatcac tatcctcgca ccgattgtga
    30121 cctatttcct gactattttt gctggtaccg ggaacatttc cctggcaacg ctgccggtta
    30181 ttgctgaagt cgcgaaggag cagggaatca aaccttgccg tccgctctca accgccgtgg
    30241 tatccgcgca gattgcgatt accgcctcgc cgatttctgc ggctgtggtg tatatgtctt
    30301 ctgttatgga aggtcatggc attagctaca ttcacctgct gtccgtggtt atcccctcta
    30361 cgctgctggc ggtgctggtg atgtccttcc tggtcacgat gctgttcaac tccaaactgt
    30421 cggacgaccc gatttaccgc aagcgtctgg aagaagggct gattgaactg cgtggtgaaa
    30481 agcagattga aatcaaaccg atggcaaaaa attccgtctg gctgttcctg ctgggcgtta
    30541 tctgcgtggt tgtttatgcg attgtcaaca gtccgagcct cggcctggtt gagaaaccgc
    30601 tgatgaacac caccaacgct attttgatca tcatgttgag cgtcgcaacg ctgaccacca
    30661 tcctgtgtaa agtggaaact gacgccatcc tcaactccag tacctttaaa gcagggatga
    30721 gcgcctgtat ttgtattctg ggcgtggcgt ggctgggcga taccttcgta tccgctaaca
    30781 tcgactggat caaagacact gcgggtagcg tcatccaggg gcatccgtgg ctgctggccg
    30841 tcatcttctt ctttgcttcc gcgctgctct actctcaggc ggcaacggcg aaagcgctga
    30901 tgccgatggc gctggcgctg aacgtctctc cgctgacggc agtcgcttcc ttcgccgccg
    30961 tttccggcct gttcattttg ccgacctacc cgactctggt tgcggcggta cagatggatg
    31021 acaccggtac aacccgtatc ggtaaattcg tctttaacca cccgttcttc atcccaggca
    31081 ccctgggcgt cgttctggct atctgctccg gcttcctgct gggcagcttt atgctgtaag
    31141 tgtttcaccc gcggggcgta tcacgccccg cattctcccg ccctttgact aacatcctgc
    31201 cctcgtccgt tgtatagtga ccgttcactt gcgggtcttt ttgttctttc gaggtgttta
    31261 tgcttgatgt taagagtcag gatatttcca tccccgaggc tgttgtggtg ctttgtaccg
    31321 ccccggatga agctaccgcc caggatctgg ccgccaaagt gctggcggaa aaactggccg
    31381 cctgcgccac cctcctcccc ggcgcgacat cgctgtacta ctgggaaggc aaactggagc
    31441 aggagtatga agttcaaatg atcttaaaaa ccaccgtttc acatcagcaa gcgcttatcg
    31501 actgcctgaa gtctcatcac ccgtatcaaa cgcctgaact tctggtttta cctgttactc
    31561 acggagatac tgattacctc tcatggctca acgcatcttt acgctgatcc tgctgctgtg
    31621 cagcacatcc gccttcgccg gattattcga cgcgccgggt cgctcgcagt tcgtccctgc
    31681 cgaccgggcg tttgtttttg attttcagca aaatcaacac gatcttaccc tctcctggca
    31741 ggtaaaagag ggttactacc tttaccgtaa acaaatcagt atcacgccga cgaaagcgga
    31801 tatcgccgca gtccaactcc cggcaggcgt ctggcatgaa gatgaattct acggaaaaag
    31861 cgaaatctac cgtaagcggc taaacgttcc ggtaacggtt aaccaggcgg cggctggcgc
    31921 gacattaacg ataacgtacc aggggtgcgc cgatgcggga ttctgttatc cgccggaaac
    31981 gaaaacggtg ccgctaagtg aagtcgccgc ggcaatagac gccacgccga cgcctgctgt
    32041 cacccagacg ggtgagacgt caaaacccgc cgcccagcta cctttttctg cgctctgggc
    32101 gctactgatc ggcataggca tcgcctttac gccctgcgtt ttacctatgt atccgctgat
    32161 ttccggtatt gtcctggggg gaaggcaacg tttgtcgacg gggcgcgcac tgctgctggc
    32221 ctttatctat gtacaaggga tggcgctgac ctataccgca ctgggtctgg tcgtcgccgc
    32281 ggcgggatta cagtttcagg cggcgctgca gcacccttat gtgttaatcg gccttgccat
    32341 cgtgttcacc ctgcttgcgt tgtcgatgtt tggcctgttc acactacagc tcccctcctc
    32401 actgcaaacc cggctgacat taatgagtaa tcgtcagcaa ggcggctcgc ccggcggtgt
    32461 ttttgttatg ggggcgattg caggattaat ttgctcgccc tgtaccacag cgccattaag
    32521 cgcgatcctg ctttatatcg ctcagagcgg caacatgtgg ctgggcggcg gtacgctgta
    32581 tttgtatgca ttaggtatgg gtctgccgct aatgctggtc accgtgtttg gcaaccgtct
    32641 gctaccgaaa agcggcccgt ggatggcgca tgttaaaacc gcttttggtt tcgtgatcct
    32701 cgcgttaccg gtctttttac tggagcggat tattggcgag gcttggggtt tacgtctgtg
    32761 gtcgctgctg ggcgtcgctt tctttggttg ggcctttatc accagccttc aggccagacg
    32821 agcgtggatg cgtatcgtac agattatcct gctggcggca gcgctcatta gcgtgcggcc
    32881 tctacaagat tgggcattcg gatcgccatc cgcgcaagct ccagcgcacc tcaatttcac
    32941 ggctatttct accgtggatg aactcaatca ggcgctggcg caggccaaag gcaaacccgt
    33001 tatgctggat ttctacgccg actggtgcgt ggcctgtaaa gagtttgaaa agtatacctt
    33061 cagcgatccg agggtccagc aggtgctcgg cgacacggtg ctcttgcagg ctaacgtcac
    33121 cgctaacaat gcgcaggacg tcgcgctgtt aaagcatctg caagttctcg ggctgcccac
    33181 cattctgttc tttgatgccc aaggccagga acagccgcaa gcgcgagtca ccggctttat
    33241 ggacgccgcc acctttagcg cgcatttgca cgatcgccaa ccatgagcga cacttgcaaa
    33301 agcaaagacg gaggagaata ccgtgcaacg tgaagatatt ctgggagaag ccctgaaatt
    33361 actggagacg caagggatag ccgatactac gctggaaatg gtggcggagc gcgtaaatcg
    33421 cccactcgac acattacagc gtttctggcc agataaagaa gccattttat atgacgcgct
    33481 acgttatctg agtcagcagg tagatatctg gcgacgccag cttcttcttg atgagacgtt
    33541 ttctgctgaa caaaagctac tggcacgcta cagcgcgctt tcggaatgtg tcagtaataa
    33601 ccgttatcct ggttgcttgt tcattgccgc ctgtacgttt tatcccgacc caacccatcc
    33661 tattcaccaa ctggctaatc aacaaaaacg cgcggcacat gattttaccc atgggctact
    33721 gaccacgctg gaaattgacg atccggcgat ggttgcaagg cagatggaac tggtgctgga
    33781 aggttgtctc agccgaatgc tggtcaaccg cagtcaggct gatgtagata ccgctcagcg
    33841 gttggcggaa gatattctgc gttttgcaca gtgccgtcag ggtggagcgc tcacctgacg
    33901 ggtactgatt ttatgcattt tgcctgaaaa gcaggcagtc agcgcgcttt tatcactttt
    33961 ttcgtgtaaa gccgttgacg accgcgcccc tttacggttt aatgcgcccc gttgcccgga
    34021 tagctcagtc ggtagagcag gggattgaaa atccccgtgt ccttggttcg attccgagtc
    34081 cgggcaccac ctttcctttt ttatgcttcc ctatgaattc caatatgtat gtaattcaat
    34141 aagttagcgt aaaaatcttt ccagatgcgt tttgatttat ccctacgtat ccggaaaatt
    34201 aggggtcagg ttgagggttc attcagttcg atgaacggag aggccctcat gttgactgac
    34261 agcaagatcc gcgccgcgaa acccctcgca aaatcctata aactcactga tgcacaaggt
    34321 ctgtacctga cggtatccac cagtggttca aagctatggt atttccgcta ccgttttgaa
    34381 ggtaaggaaa atcgtctggc cttcggcccc tatccgcagg ttacgctggc ggaagcccgc
    34441 gaaaagcgcg atgcggcgcg taagctgctg gtatccggcg tttgcccttc tctgccccgc
    34501 aaggcggaaa aagccgccgt tgacggtacg cgcacctttc agtacatcgc cacggcgtgg
    34561 cactccagtt gtcttaagct gtggtcagaa gaccacgcgg acaagatcct gacctgcctg
    34621 aagcgctacg tcttccccga tattggcgca atggacattg cagaggttga aacccgccat
    34681 ctggcgcagc ttgttaaatc catcgacgat aagggcgtgc atgacgttgc cgggcgggtg
    34741 cgccagcatc tgaccaaaat catgcgtcat gccgtacagc agggaacgat taaatataat
    34801 ccggcttacg atctggatgg cgtcgtgacc cctgttgtga cccaacatca ccccgccctg
    34861 cccctgaaac gcctgccgga gctgctggac aagattaatg gctacaaagg gcgggaactg
    34921 acccgtctgg cgctggagtt gaatctgcac gttttcctgc gctccagtga gttacgcctc
    34981 gcccgctggg atgagttcaa cctgaaagct cgtatctgga cggtgccagc aaagcgggaa
    35041 gcggtgaaga acgtgcgttt ctcagagcgt ggcgcaaaga tgaaggatga gcatctggtg
    35101 ccgctatctg cgcaggctgt cgccctgctg gagcagataa aggaaattac cggagagtcg
    35161 gtatttgttt ttgcgggtgc tcactcaatg aacaagccga tgagtgaaaa caccatcaac
    35221 aaggcgctgc gcgtgattgg ttacgacacc aaaaccgaag tctgcggtca cggattcaga
    35281 acgatggcct gtagcgccct gaacgaatcc gcactgtggt ctaaggacgc catcgagcgc
    35341 cagatgagcc acaaggagcg caacggcgtg cgggcggcgt atgtgcataa ggcggagcat
    35401 ctggaagcgc gtatggagat gatgcagtgg tggtcggatt atctcgacat gagccgcgag
    35461 gggtacgtcg cgccgtatat ttatgcgcgg cggcataagg ctgcctgacc cagcggcaat
    35521 ataatttgtt gataatgaaa aagcagatcc tgattgaatc cggatctgct ttttgtattg
    35581 aaaggattta acttcaattt tttgattgtt aataggaaag cctacaaaaa tattctacgt
    35641 agaatatttt tgtacgaaaa cctattaata caaaatggct cattcagatg aacatctttt
    35701 gcagtgctta gtactaatgt atctccaaac gaatgattgc ccacacagtg ttatgtccta
    35761 tacgataaat tgaaaaaacc ttatattatc aataaaaatc cgtcattcag gatgtgaaat
    35821 gatgaaagag aaaaaaacac tgctcaacaa taatgagaat ggaactggct taccatccaa
    35881 gccctcaatt atgagtgaaa ataaactcca gaacacagtg ttttccgcta ttggcagtgc
    35941 atccccagct cacaagctgg tacagggctc cagcgctgcc gctttcctga aaaaccatga
    36001 atcacttctt gccggtaccg ctgtcagcag cgcattcgca actcagaagc cggcacaggg
    36061 ctccagcgct gctgctttcc tgaaaaacca tgaatcactt cttgccggta ccgctgtcag
    36121 cagcgcattc gcaactcaga agctggcaca gggctccagc gctgccgctt tcctgaaaaa
    36181 ccatgaatca cttcttgccg gtaccgctgt cagcagcgca ttcgcaactc agaagctggc
    36241 acagggctcc agcgctgccg ctttcctgaa aaaccatgaa tcacttcttg ccggtaccgc
    36301 tgtcagcagc gcattcgcaa ctcagaagct ggcacagggc tccagcgttg ccgctttcct
    36361 gaaaagccat gaatcacttt ttgccagtac cgctgtcagc agcgcattcg cagctcagaa
    36421 gctggtgcag gactcgggca ttaccgctct tttcaaaaag caggggggga tattcaacga
    36481 aaattatttc gctacaagca ttgctaaaca attagaaaaa ttagatgcaa ccgaaattca
    36541 aacattacag gaagcggcca ttctattttc acgctcacct caaggtgcag caattattgc
    36601 aacaaatatc catgcagtag aagtaaaaga gcctgacgca ttaacaaaat taaaaaatta
    36661 tatcgaaaaa agccctataa cttcaaactt tagaaaatta ccattattag tacaactcat
    36721 catcatttat cttgtaacca ccatgtattc agtcgttgtg gataaaaaca aagaattagc
    36781 aatgaattta atggaacaag cgcaacaata tgttagtaaa tctatatcac caagaactca
    36841 ttttaaagaa ttaacaaaac agttaccccg cgaagttgac attagcacat taaaacacat
    36901 aagaataatt actggagaaa atgtccgatt acggaacaca ccatcaatgc aaggcgatgt
    36961 attggttaag ttggaaaaat atactcccgt gatcgttatc gataaaagtg acaggaaatg
    37021 gttatatgta caactgtcat tcggagaaca aaagatctat ggttgggtca atcgttccta
    37081 tacaaaagca ataaatcatt aagtcataaa atttgaatga attctcattc ctaatgaata
    37141 agtataaaat acttttagcc acccgacttc taagtgcaga tcgggtggtt acgacaccaa
    37201 aaccgaagtc tgtggtcatg gcttccgcac aatggcctgt agcgccctga acgagtctgc
    37261 gctgtggtct aaggacgcca tcgagcgcca gatgagccac aaggagcgca acggcgtgcg
    37321 tgcggcatat gtacataaag cggagcatct ggaagcgcgt atggagatga tgcagtggtg
    37381 gtcggattat ctcgacatga gccgcgaggg gtacgttgcg ccctatattt atgcgcagcg
    37441 gcataaggcg gcctgagcca gcggcaatat aatttgttga taatgaaaaa gcagatcctg
    37501 attgaatccg aatctgcttt ttgtattgaa aggaattacc ttgcattttt tggttgttaa
    37561 taggaaagcg tacaaaatta ttctacgtag aataattttg tacgaaaatc tatcaatatt
    37621 tcgcgaatca ataggtaaat atagaaaatt atttgaggag aataatttca ggcgatagca
    37681 gccagacaat ctgcaccaga aactgatttg ccgatacgcc ataactgcac cagttcagtg
    37741 tcatcgttta tctgcaccag tctgccgtcg cctgtctatg tcaggattgc gccagatacc
    37801 accggataaa taccgatctg cgccagcttt atccttttaa gccctttggc cttttccggt
    37861 ctggcgctgt tacccttagc cgccctttac ctttatctgg ccttttccct tttgctggca
    37921 caatcaccag aaaaaaataa cggaatgctg caccagaagc ctgttaatag gctagaccat
    37981 ttagaaacat cgttattaaa aggaaaccgt acaaaaaatt ttgcccccaa aattttttgt
    38041 acgaaaaccg atggataacc tcatattgca agtctgaagc tatcaatcac caccatcctt
    38101 tctcccgtaa acctgcgcca cataccgtcc gcgtccgtcg ccgtgcccca aatccatcgc
    38161 cgtcattgcc agcgcttcct tctcactaaa tccctgcgcc agataatgac ggatcgcatc
    38221 ctgcgcccac gcatagcgca acgagtgcgg ggaatatgcg cccgttaagc cgagacgtga
    38281 cgcctgactg tgccagtatt tcatcgcggt tttcagatcc ggcttatcta tcagcctgtc
    38341 gtgacgatct tctgccacag ccagcgcatt atccagcgct tttctgactg ctaccgcatc
    38401 aagaataatc gtctcgcggg gtcgcccgcc tttggtgcca aacactacgg ttaagcgggt
    38461 gtcaccacga tccagcgcct gccgccacgt tttcagcgac tgtacgctct gcaccgcctc
    38521 ctgcgagcgt aatcccatca gctttgagag ttccagcgct gccgccatcc ccggatcttt
    38581 tacacgggct gtctccagca cgtcacgata gtgctccggc gtgatagcca gctttgtacc
    38641 gttgcgggat gcgccagaca gaccaagaga acggttgttc agccgctcac tctgcgccag
    38701 cctgtcacgc ccggcctgtt tcagaatgca acgtaccgcc gccatctcgt tttgcaggga
    38761 acgcttcgtg atgccctgcg ccagcttaat gcgatcgtga acggtcttat ggctgccgcc
    38821 cgcctgttgt gcaagccgct tcatttcctg cgccagaatc cccatatttt ccccctttca
    38881 tgattgccgc aaactcatcc caaaaaacca acactgatac cgctttcccc ggcgcacagg
    38941 ccgatagccc ctgttttttt gtcggggctg cgaacgatac ctgagcgccg gggcggcagc
    39001 cgttgaggtg tggtggggct tcggttgtgc tctcagagca gccgcccgct tgtgcgggtt
    39061 atcccccgga tcgtccggat ccgcctcggt atcggctcat gttctcctta tgggtaaaat
    39121 ggcctgaaaa ggcagtgtca gaatccagcc atgagctggc gcagttgagt tgtctggtgc
    39181 aggtcgaaaa ggctgcgtgc gtcactttcc cgctttacgc ggttaaagtg acgcactgga
    39241 ctggtgcagt gtctgaaaat ttatcgttgg tgcagtttta cgaccacgca gcagcaaagc
    39301 ctgctgtctt tgcaggccgc agtccgtaag gtaaaaggcg cagagggtgt cagcagatac
    39361 aggttagccg ggaaaatttc ggcgcggagc agattcagac cagcaggctg gcgcagtaaa
    39421 ggacatatag tgttaaaact cgggcctccg tcgcgatgtt ctgcgacccg gtgtttgcag
    39481 aggtctgcac cggtaaacgg atcaaccgtc ctgataacag gcgcttcttt caggttgtga
    39541 agcgttgggc gctgtcgacg acagcatgga gcaggaggga gactacgcca gtgccgctgg
    39601 cgcagaaagg aaaaactgtt tgtacgtcaa aaagattatt tgcgagcctg aactgccgcg
    39661 cttcgcttgc cttctcccga tcttctgaca gcaaagccat cagaagatcg ggagagacga
    39721 tttagtaatt ttcaggcttg cggtagtggg aaggccagat ttgctctggc gcaataccca
    39781 acgcttcggc aatcagcctt tcgcctttgg gccagtgcct tatcagcgca tttgccagcg
    39841 ttgaggacgc cagccccgac tgacgggaca gcgccgccag cgaggtgccc cgttttctca
    39901 accccgcgat aatgtcggcg ggatgccagt cctgttgcgt catgctgtca cctcgtcaat
    39961 aaacttcacg ccgtcagcgg tacgcagcca gcgcggggcc gtgatttcat cagaaaaata
    40021 atggatcagg tcgtacagca ggcagccaag gtaatttctg gtttccggta atagcccctg
    40081 tcccgtcagc acctgcgtca gggcaaggca gtagttacaa agttcagtac attcgggatc
    40141 gaaacgcggt gagcgggtgg ggagcgtatc aacgatcagg ctgtccatca tgtgctccgg
    40201 gatcggatca agcagtgagg gctgaagaag ttgcagacag gcattaagcc tgccgcaaag
    40261 tgccattttc agcgtgggat cgtcgtgttc gatcaggatt tcggcgaact gtttgcagtg
    40321 ttctgccagt acggtgaaat ccgtggcggc attgaaggga acggagagta gcgggtgtgt
    40381 ctgggtgagg gtcgtagcca taaggcatcc tccgatgagc agtgtttatc accaccaccg
    40441 gagaggctaa tctcatggtg gtggaaccgg acggggttag ccttaccggc ctcatcgaca
    40501 ccggcgcgct ttgcagcgcc cccgcccggc ccaccattga gatgtagcag aacgcacgac
    40561 acaaaaaaag cgcagacgcg cctttgtgtc gtcgatgaag tcaatcagga ggctaatccc
    40621 ggcacctgaa tttgcaggtg cgtgtaaaag ataccgcaat tagccaatag cagcaagtga
    40681 ggggttctgg aagcagatcg cagaaaataa aaattccaca gacaagaccg ccataacagg
    40741 aaaggtttat tatctgttag cccgcacatc gctgtggcga aatgtgatta atgtcaataa
    40801 gttgtataat gtgtacaaca gttgataaaa catcccacca acaaagaata aatgccgtac
    40861 tatctctgat ataagcaaga aaactcaggc gcagctttcc tttctgctgg aatatttggg
    40921 ctattcaata cgaaaaattt tgtaacgatg aattcaatct tctatcttga acgtcatttt
    40981 acgcacggtg acagaaccta cacagagaca gagttgctgg cggcatcaac gcacgttgtt
    41041 gtgttagcag aacccggcgg cgggaaaacg gaactgatga aaagcctcgc tcggaaactg
    41101 aacactactg tcttaaatgc cagcgtattt gcttacgcag gagcagataa agaaaatagc
    41161 gcactggtaa ttgatgccgt tgatgaagtc gccagaattg atcaatcagg tattcataaa
    41221 ctccttgctc tcgccagaac atcaaagccg actcgcgtaa tcatgtcaag tagatcaagc
    41281 gaatggggac aggcttgtac cagcattttt gaaaaatttc ttggtttctc cccgatggtt
    41341 gtgaggctga aagaattcga tcaagacgag caacacgcta tctttaagca ccatgcgcca
    41401 gaagaagact tctttgcatt ccagaccgaa gtaacacggt ttagtttaga catgttgtta
    41461 ccaaaccctc agtttctgaa aatgttcacc gatgcctatt tagaaagtgg caggcgattt
    41521 gctgacaaac gttcaatctt tgctttagca gtcgaacgac tggctaagga agtcaatcca
    41581 gatatcccga aagcccctgt atctctttca gttgcacaga agatttcatt ttctgccgag
    41641 gtttatgcca aacttctgtt gtcgggcgca gagggagtca gcaccatcga cgtgacggca
    41701 aaccggatgt atcccatgct gccagcgttg tttagcagca gtgcggcctg ttacgacata
    41761 ttgtcaactc agcttttcaa gcccggcgat aaggaagacc agcaccgccc ggtccacaag
    41821 attgtcgctg aatactgcgc agcggattat ctcattaaac gaatagccga tcctgtggat
    41881 gtcctcactt taccaaagtg cttgcctgtt attgcaccga acggtattgc cagagatgag
    41941 ttgagaggtc tgctcggatg gatggcagca ttaggcaaca ggtcggtaca gggatccatt
    42001 attgagcttg acgcctatgc ggtactcgca aacggcgatc catcgcagct tgaacgctca
    42061 tcaaaacgac agcttctcta tcaactcaaa gagattgaag ccgcagatcc ttactttcgt
    42121 cggagtgatt tctggcgccg gttcagcgcg gctggttttt tcacgcaaga cgttgttgag
    42181 gaaataaagc ctcttttaac gatgggcaat gatggtcatt tacgtgattt aattttagaa
    42241 cttctggcag actctccagt aaacagtcag ttggtgcctg aattgagcca gcttacgtta
    42301 aatcccaatg agtctgaaca tattcgaacc ctagcaagca gatgcttact caatatcaaa
    42361 gaatacgatt gcattggcgc tttagctgtt ttgatttttg aggccagtaa tatttcactc
    42421 aatattgcag ccaacgtcat cgaagtcaca gggcccgaaa aattcgacca ccgatatctc
    42481 tctggattct tccgcgtctg tgcgaatctc tatcccggtc acgaagaaca attcgaaaga
    42541 gtggtcggcc tcgttatttt attaaaaagc tcatttcctg tttttcactg catactctcg
    42601 aacttcttct ggacgaatta acctgtaacc tttattgcca ttgtgggaaa gaatcctatg
    42661 aatgtgattg tcgtaatgga ataagcaaga ttgtcggttc aatggtcgat cgctattttg
    42721 aactggctca agcaccattt gatcctgtga ggatctggca atggataggt aatctcaatt
    42781 ttcatcacca atgtcaggcc gatcaaagca aatcggtaca agtgcttcgg gaaaatgaca
    42841 cacttcgtca ggggatcatt gcctatgtat ttgggccttt aacggatcgt aatgaaatat
    42901 tcaacacaag agtagaaaag ttcgacgggc atctgcactc acattcaggc cttcatttat
    42961 ggaggaatga ctataaattt atcctcaatc tggcttttga agcagataac gttgacctgt
    43021 gggcgagttt ccttgtcaac caccaacgtt acagaaacaa ggaagagcaa ggccctgatg
    43081 atttgcgggc acaaatgcgt cggcatgccc tctccaagcc cgcatttatg cgtgaatggg
    43141 cccgatacaa caatgcaatg aaattatccg ggcagaaaag ccaactccgg agattcagac
    43201 atagccgaaa aatgaaacgc cgtgacagaa agcaacgaga gatccacgcc agaaacataa
    43261 aatttgttaa tgagaacaga gatattgtag agcgaggtcg tcactggcgg tgcctgctgc
    43321 gttttgcaga acttgtgctc atgcatccgg aaagaattga attagaattt ggtgacgaga
    43381 aactggttcg gacagcgttg cgaaattgtc tggattttat tactcccgag gttcccactc
    43441 tacccgaact agcagcactg caatgcgaat ctaaatacag gcattctgag acggttttat
    43501 atgccgcctg tctggagatt ctacgtgcag aaggcaatct tgaatgcgtc aatatcgagt
    43561 tgcttacagc cttaagaacg aacattcaca ggggatacca ctcagtttcg aaagaagaac
    43621 gtgatgcgct acagactgaa atcgaccgcc tcatttttcc ttatagtgaa agtgctgaaa
    43681 aatatctccg acagtacgtt gaaccccaac tcactcagcc atgccctcac cctgaaatcg
    43741 gggtattaag tagacaagag gtctttcgtc attcacgcgc taaactttcc attgaatggc
    43801 ttcgtcgttt tcccgatgta tcccttaatt cagtcgatac actttttgaa attgccgctc
    43861 aatacggcga tcgtgagaat ttaaaagaga ttattgcaga gcgttgctca gagatgatgt
    43921 caggctggcc caatccgaaa gaaaatgagg atattgaacg caaacgaata ttctggctgg
    43981 tacgtgaatt ctactttatg gagaacattg cggatactta ttgggcatgg ttaaaatctg
    44041 ataaaaataa tttactgcat ttttatgaac gttctggacg tatgaatcga agcgagcacc
    44101 gtgcctggcc ggaactcgcc tcaattaaag ttgaagccat tttagacgct ttcattgaac
    44161 actggccgcg agttgatcta cctgatagct ggggtagtga tagccctaaa gaagagaaag
    44221 cctaccgctt tttgactgat ttgatttggt caataaactc ggacacttcc gatgatgcaa
    44281 taccagtgct ggaccgtctt cttaacgatc cacgtttcac caatctacat aaagagttgc
    44341 aaagcatata cgctgatcag atcagaaaaa aagcactcag agattttgaa ccaccgacgc
    44401 cagatgagat agttcaacgc cttgattgtg attcagtcgt taccgttgaa ggcctgcgtc
    44461 agttagttct tcaggagctt catgattttc agaaagcgat tgatggcggg gaatttaact
    44521 cggctgatcg cttctatgag aaaaatgaac gcctcgatga ggtaaagtcc acagagatta
    44581 ttgcggagcg cctgagttta agacttcagc ctcagggtat cgctataact ccagagcatc
    44641 agttgaaagg gcaaaacagg agtgatttca cagcatctaa attgattgga ggaagaagac
    44701 ggctgctggt tacggaagtc aaaggccagt ggcacagaga gttatattct gctgcttcag
    44761 cccaactcta tgaccgttat tccattcacc ctgatgccga acagcaaggt atctttcttg
    44821 tcatatggtt tggagaaagc gaaaccgttg ctggccgcaa aacccacgga attaaaaccg
    44881 ctcaggagct aaaaattagt attgaagcag tactaccggc tgatctccgt gatttaattg
    44941 atgttttcgt tttagatgtt tcacggaacg gtggccacca acgttagcaa tatagctctc
    45001 gctaattaac cagagatcgg gttaattagc gagagccaac aaaacaccgt aagtattacc
    45061 atgccaccaa gtgaatacca ttggccatct ggaaaactgg attcctttat tttgtttgct
    45121 ttgtagctct tatgttttaa acataatata accatgattt gatatatatc aaattatttg
    45181 gcttgatctc ataactgtat atgaatacag tatatacaac atatggcatg ttttattaaa
    45241 aaatgatact acatgctcaa aactgtaact ctacataggt gctaatacat atgccaaata
    45301 atactaagaa aacctcctca acgattgcat cacaagcagc tcaagtgctg aaagatccta
    45361 atgcttcagc tattcagaaa agtttagccg gatctgcttt atcccaatct gggacttcaa
    45421 accaaacggg tggggaaatg gagactacag cctcaaaagt tttaaatagc cctaaatata
    45481 atgaccaaac aaagacgctt gctgcttcag ttctttccca agccaataaa gggcggaaat
    45541 gacagcgtct ttatatctat aggcagctac atgtagctgc ttttcttctg atgattttaa
    45601 atgtctacaa tggaaataat tgtatggaac aatgtaaaaa tgacgctata ttagaacata
    45661 tcaagaatta tagtaaacat attgatgaat ttagatctca ggcaaactca caagggattt
    45721 ggttatttat ttcaactctt ggatgttgga gcgtaaatat accactaatt caagttatcg
    45781 cggcaatctt gttattctgc atatttatat ttaattccaa acaggacatg acagaaaaaa
    45841 gagcgtttca taaaatagaa gaagacatag caaaggatat tgatagtaac ttaataggag
    45901 actccaggaa agccaggcta tatgatctgg gattagttga aaaatataga aaagcaatta
    45961 agccagtttt aaaaacctca ccaatattta ttgtgtgtta tattttctat tctattagtt
    46021 tcttggtctt tttttctaat ctttttcccc ggatgaagtt aatttttaac ttttgaattg
    46081 taatcaaacc tcaagcatta aaataatgtt tgaggttgtg cgcagatctt attttacttc
    46141 acattaaaca ctgaagatac ctgatgactt cagacagcgg acatgccgag caacaatata
    46201 tcattgataa tttgattcat aaaacaacca tcttattggc accaaataat accaatcagg
    46261 catgaaccaa atcccccaac gtcaccatca acatcatcgg atccatcggc gacggctcaa
    46321 accccacccg caggtaaaac tcccgcgctt catccgacag ggcatggacc agcatcccgc
    46381 gaataccgat agtttccgcc acctgaatca cccgcagccc ggcatccctc accagcgccc
    46441 gacctacgcc ctgcccatgt agcgaccgat ccaccgccag acggcccagc accacaaccg
    46501 ggatcggatc gggcatattg cgacgaaagc gaccgggggc ggtgtttgtc gttaccgcgc
    46561 tggacgccag cgaataatac gccagtacgt cagaatcgct gccgcaacac acaaaggtac
    46621 gggatgcgcc agttacctga tttttcatcg cccgctgttt tagccagtta tccattgaat
    46681 ccacaccgca gcagaagggg gtaagaatat gcccggcatg aagcggttca ggggcggaga
    46741 tcatttttcc tgctcccacg gtgcaggagt ctgcatggtt ttacgcaacg catcgtttgg
    46801 cgcaggagcc tgatccagac ggatcagaaa tgcctgataa gcctctggat cggccataat
    46861 gatgcgttgc tcgatcagcg cttcctcggc ggcggcgcgg gcagcttcta gcacaaagtc
    46921 tgtgcagttt ttccctctgg cttttgcagc ccgatcgata agatcgcgct cggcgggctt
    46981 gatgcgcagg ttcagggttt cgcgtttcat cgccatactg tttgcgactg gcatggtgtt
    47041 gtcctcttgt gtttctgtgg atattaagta tacaacacgc gtaacgcaga tgtcattacg
    47101 atagatttaa agggaatcga accagcgcat cgaaccgaac aagtttttat acctcaaaag
    47161 ccactatttt gatttacaag taaaaatacg ggtcacgctc agggtcttga caattcgtca
    47221 aaaacggatt tatgacggaa ttcaatttaa tagatagctg aatgctcccg agtccgggca
    47281 ccactcttat caaagtacgt tggttagggc ttgagaacct taacggacgt tacgtggaac
    47341 ccgaaaggac aatcgatgta gcaggtcagt ctacacatcg agatggattt ttgggtttct
    47401 caagtaaggg aacttgttgg cgcaagttcc cttttctcga tcacccgata tcgttacagc
    47461 ttatctattc tttgtcaacc cactgtaaat gcttcgggca tgtgctgcct taatctgcat
    47521 aaactgcgct tccagagccc tccccatcac tgcaatatca ttctccacat actccagcgt
    47581 ggatttcatg tttgaatgac ccagcacact ttgcgccata tgcagattct gttccggcat
    47641 tttcatcatc tccgtggcca gcgtgtgtct gaaacgatga ggactgatcg caaactgaca
    47701 ctccttggac agacgacgga agaatgctct tacctgagga gaatccatgt catcgccaat
    47761 ggcgggatct ttgccggtaa aaagtgcaat attgaacagg cggtcattac ctttcaatcc
    47821 ttcgctctgc gctttctcca ttaaacaggt cagccgtgga cgcagaaaac tgatcaccgg
    47881 cacatagtgt tctttgtgat ttttacaccc ctccgtaatc agccgaatct gcccttctct
    47941 caaatcaaca tcattcagcc gaatatgtaa taactggttc tgacgtatcc ctgtgtaata
    48001 gagcgtatcc aggacagtga gccagaacca tgcaggaaat aaggcgcagc gggaatattt
    48061 cagtcccagc cctgtattct cctgattttc atactgctcc atgatctgat aggcatactc
    48121 aatctgtgcc tgagtgagcg ttttctttct cttcttgtcc ggtttaacta ccgaattgtt
    48181 aaacggattt tcgtcatagt gcagtaaccc tcgctgtatt ccgtagttaa agatggcccg
    48241 catatgcgcc accttgttat tccaggtacg tccggacagc tttttctctt ttaaaagaaa
    48301 acggcgccag gcaagcactt tgtgatatgt cacatcatta gggcagctta acggccccat
    48361 ataatgtaca aatgatttga agactttggt gtaactccat tcagatgctg agcgcagagg
    48421 ttttgcgaag aaatattcat ctatcaattg ttgccaggta atatttgttt ccatttttat
    48481 caccgctatt gagcttttat tattaataca cacacagctt gtgtggattt aaattcccgt
    48541 aatttcatgc acatgacaac ggaaaaatat ttcaatttgt tacaggaact gatggttttt
    48601 taagactttt cttatattta ttttgttaca ttttatttca attgatgacc tttagaaata
    48661 aactgtcgtc gggaaagtta ccattagcat aaatctctga catttttatc agataccctg
    48721 ttaacttttt gtatctcccc ctgccccctg gctcttcata aagacagcac tgccagaatc
    48781 gccgggaatc actgacccga tgctttcgca tcttctcaaa tgccgcctgc acctgctcct
    48841 tcctcccgct ttctttcaga ccagaagaac aggaacgcga atgtgatttc aaaaacagaa
    48901 aaaaaacacc cgggacgctg ataaatacga agccacaagt cagatgaaca caggcatcag
    48961 cagtatttac tggtatatcc ccctcacgaa gcccatccct tagccaggac cagaacaaat
    49021 ctcccagctc cgttgaggaa agcgatgata tgccacccga ggatgatcca gtgcattcag
    49081 tggtaacggt gtcattgata acctcttctg ctgctgaagt ctcaagtgca accgcgactt
    49141 ccggaaacga ttctcctgcc accatatcgg tctctgtgtt cacgccttcc ttttcaggcg
    49201 actgtgtgtc agtgttcgtc agccctccca gaatcgacat gacctgaaga acatctggat
    49261 ctgtttcagc agtaggctgc ccttccccac gttcaggctt agcatcagaa tcaagggaag
    49321 ataaaaggac agtagtctcc tgccctccat caaccatgac agggacatca ggaggagttg
    49381 tagaagaacc tttcctcaac acgggagcta ctgtcgcggc agggtttagt atctctgcta
    49441 attcagaagt ctgctcttcc tgtgcaatgg gaaaaccaag aggtatccct ccggcatgca
    49501 caatggcctc attaacgata tccgtaatat ccattgcatc actgtaacgt ccgcttatga
    49561 aagccagcaa tgttctcaga atatcagggt ttttacccag ccactgaaga accggttctg
    49621 gcaaaaatct gagagcgatc aattcaccat aaacctgagc acctgctata tcgggttctg
    49681 ctttaaaacg aaaacgataa ggttcttccg gaacacttaa tcccgggcgc catacagcac
    49741 cactacggag ctcgccttca atattccata agcgccccaa cgagtggaat aatgcagcgt
    49801 aataaacgac agcactccag ctgactgact gcgcggattg ttcctctgca gatgcacctc
    49861 ggggcagcat atatcctttt gataaacgta cggcaaagac cgtcgtctgt atgacgtaat
    49921 ccaccatgcc gtctgtatag gcaaattttc cctgagccga agccgggagt ctctgacata
    49981 aacccacaac gccgtgtaaa gggagtaaaa aataacgttc aaaacgctct ttaggtagcg
    50041 cgctgttctc ccacaaaatc cttaaccatt gctgccgtcg ttcatgctgt aacaaatctg
    50101 aaatggccgc agggttaaaa tatccatccg tacagggaat aagtctcttc ttcgcatttc
    50161 ccgatttatt ttcttctatc tgtctgaagt ttttcttctc catccatgac ttaactttcc
    50221 ggaacatatt cagtcccttt tttatcgttt tctgtactca cttctgactc acccgattta
    50281 tccgcagaag ttccggctat atcttcagcc cggggctgga tcagaagctc gtgcaatatc
    50341 ggatcggtta taagcacttt acgcgcccgg gtggctgcca catacatgag gttaatttca
    50401 tcctgccgct gactttccgg catgtcagga tccagaatat cgagaaagtc atcatgtaac
    50461 ttcaccctgt cccattcgag ccccttactc ctgtgtgctg tacataccgt cacatcagct
    50521 tcagattcac tgatgacgcg ttgctcacgt aacgtattca gtctgtccgg taacggaaaa
    50581 aactgttcaa gaataaatat cccctgcttc atctccacat caccggtatc ttcggctatc
    50641 tgcagatatt catcatagtc ccggtattca cgggtcagcc tgtcgtgtcg catacgctcc
    50701 gacatatcaa ttgagaacca gtacagatcc agtaaatcct caattctgta gctttccata
    50761 ccaccaaccc agaatacttt cctgccagcc agcgaccagt gcagtgccgt ccggatgaca
    50821 ccacagacag atcggtgaag aacagcatga tggccaaaat tccgcggcat tgtgagcaga
    50881 acacggcctg cgcccccctt tccagttatc tgatgcgttt cgcccttcag ggccagcagc
    50941 ctgttggcca ccccggctac ctccggaccg aagcgaaagc tgtgggttag ccaaagacgg
    51001 tctgagttct ccagttgcgg agcctgcatg gcattatccg ccccacgaaa gcggtagatt
    51061 tgctgatgag tatctccaac cagaactacc cggcaggtct ggttgagcac aatggcgctg
    51121 atgacaggat tggcatcctg agcttcatca aacaataacg tggtatagcg ggaagaaaga
    51181 ttcggtttgc tcaactggta aagctttaga taagtatcat gggtgaccgg aaaatccccc
    51241 tgacgggccg acatcattgc ccagattttc tttgctgaaa acaggatttg acctggttgt
    51301 agccccttac agtcgtcagg atcaggcatg tgttcaggcg taatatcggt ggccgcgctg
    51361 catataaagc gattcagaac atcaagcgtc agtctggcca gcaaccagtt gcgggagttt
    51421 agcgcccggg cgacataggt cagtcgtagt gaattaatca gacgatgact gtaatgtttc
    51481 ccgaccgtcg gccaggccag ttgatgcgat gttttgcagg taacgttgaa ggggaatttc
    51541 tgctccgcct catcccgaat ggcacggtta taagcaatat agagcattcg ttccgttgga
    51601 ttttcctcag cataacgacg aagtgtggtg gttttgccac tcccggcaaa agcacagaca
    51661 accagacgtt cgcccttcca tgcgatgaca gcagcctgtt caggagtatc agtgtggggc
    51721 ataatcgggc tccggataaa agcattttgc tcatcctgag aacccgccag actgttatcc
    51781 agtgcaattt ataaatccaa aaaaaagaat tctgcaaacc agccctgtac catcaagttc
    51841 atatcctcag cggaggaaat gcgtgaaatc cagcgcaaca cacggagtat cacccactac
    51901 ccaggcatca tgattctcag aaacctcaaa tgcttcgccg gcatgaataa ggtattcatt
    51961 tccgaagcag tcacgcacca tcatttcacc ggaaattata aaaccagtat gacgttctga
    52021 cggttttccg gtcattatta atgggtgact ctaatgcaaa catctagcga gaaaatattt
    52081 tgtagacatc gtcaacggaa aagttaacta acaatagtca ttatccatat ctttaatttg
    52141 aaatggaaac agggcaaaga gtaattaaaa tacagcctgt gattctgtac agttaaggtt
    52201 taaccccaaa ggtgcaaaca attaaatttg taacagatta tttcaaatac gattaggaat
    52261 attcttattt tgaggaatgg cttagcattt tttatggtcg ccaggattaa aaaatacgcc
    52321 ctatccaaac aatttagcat aatttatcat tcgattttct agactaaata agattttttg
    52381 ataggtacaa acaatgaatt gtgcaggttt gacatcaatt ctctgttgtg taaaaatccc
    52441 gtttaggccg ttagtactat taaaattagg gtaataattt tattgttagt taattgttaa
    52501 caggagcaaa gaattagata ttgcttgtac cttttctatg gatgaaatta ggttatttca
    52561 gcataaggag acttcatgag gtttcatcat ttctggcctc cgaatgatat ctatttcggg
    52621 gttggagctg ctggcattat tgaagaagtg tcactgataa caaatgacag aaattatttg
    52681 tttgtgaacc taaatcgcta cagcctgtta aatgccctga attttttcac gcgaatgagt
    52741 gatattaata aaataatcgt tatcatttca agttcgcgac taatgcccct tgcacgtttt
    52801 tggttgacag agtgcaaaaa tgttattgct gttttcgatg cggcaacatc agtccaggat
    52861 attatcagaa atgtcagtca acaccaaagt ggtgaaaaga tcttgacgga gcagagagat
    52921 tatcgtttca gaattaaccg taaggatata gtaaagatga aatatttcct ttcggaaagt
    52981 ggtatggaag agcttcagga tagatttatg aactcatcat cgactatgta tcgctggaga
    53041 aaagaattgg cagtaaaatt tggagtacgt gagccgcgct atctgttatt gccggattca
    53101 gttactttac tgtaatgcgg taatttttat tgagtaaaac acggacaagt atttcgtttc
    53161 agcacaaaat tattttcgtt actcattggc gttaatacat atattctcag cgacttctgt
    53221 tctattcaag taagaaaggg gtacggttat acgttttcat taaccatact ggctgctacg
    53281 gccaggggcg gtagcgtatc tgaataaaca cctagaatta actttgtaaa tataaaattt
    53341 tagtaaagga ttaataagag tgttcggtat agacgaggta aaaatcgcga ttattgggct
    53401 gggatatgtt gggcttcctc tggcagttga atttggcaaa tctcgtcagg ttgttggctt
    53461 cgacgttaat aaaaagcgta ttcttgaatt aaagaatggg gtggatgtca atctggaaac
    53521 cactgaagaa gaattacgtg aggctcgtta tctgaaattt acttccgaga ttgagaagat
    53581 caaagaatgt aatttttaca tcatcaccgt cccgacgccg ataaatacct acaagcaacc
    53641 agacctcacc ccactaatca aggcgagtga aaccgttggt acagtgctga atcggggaga
    53701 tattgtggta tatgaatcta cggtatatcc gggatgtacc gaagaagaat gcgtgccgat
    53761 ccttgctcgt atgtccggaa tgactttcaa ccaggatttc tatgtcggtt atagcccgga
    53821 aaggatcaat cccggtgata aaaagcaccg tttaaccaac atcaagaaaa tcacctccgg
    53881 ttcaaccgca cagatcgccg aacttatcga tgaagtatat cagcagatca tcagcgcagg
    53941 tacatataaa gcagagagca tcaaagttgc tgaggcagcg aaggtgattg aaaatacgca
    54001 acgcgatctg aatattgcct tggtcaatga gctggcgatt atttttaatc gtttaaatat
    54061 cgatactgaa gccgtgctac gtgccgctgg cagcaaatgg aatttcctgc cattccgtcc
    54121 gggactggtc ggtggtcact gtattggcgt agatccctat tatctgacac ataaatctca
    54181 gggcattggc tattatccag aaatcatact tgcaggacgc cgcctgaacg acaacatggg
    54241 caactatgtc tccgagcagt tgatcaaagc aatgatcaaa aaaggaatta acgttgaggg
    54301 ttccagcgtg ctgattctcg gctttacctt taaagaaaac tgtccggaca tcagaaatac
    54361 acgcattatt gatgtggtaa aggaactcgg taaatatagt tgtaaagtgg atatttttga
    54421 tccatgggtg gatgccgaag aggtaagacg agagtatggc attatcccgg tatcggaagt
    54481 caaatcaagc cactacgatg cgatcattgt tgcagtagga catcagcaat ttaaacagat
    54541 gggaagtgag gatattcgcg gcttcggaaa agataaacat gtactttatg atttgaagta
    54601 tgttcttccg gctgagcagt cagatgtgag attgtaatca tgacggctta cgaagaacta
    54661 cggaccaaac tggttctggc accaaagcgc tggctgatca ctggcgtagc aggctttatt
    54721 ggctccggct tattagaaga attactcttt ctcaaccaga ctgtcattgg actggataac
    54781 ttttccaccg gttatcagca taatctagac gacgttcgca cgtccgtcag tgaggagcaa
    54841 tggtcgcgat ttatttttat tcagggtgac atcaggaaat ttactgactg tcagaaagcg
    54901 tgtaagaacg ttgactatgt tctccaccaa gccgcgctag gaagcgtgcc acgttcccta
    54961 aaggatccca tcgcgactaa tagcgccaat attgatggtt ttttaaatat gttgacggcg
    55021 gcgagagatg ctcatgtctc tagtttcacc tacgccgcaa gcagtagcac ctatggagac
    55081 catcccgatt tacctaaaat tgaggaacgg atcggtcgac cactcagccc gtatgcggta
    55141 acaaaatacg tcaatgaatt gtacgctgat gtgtttgcac gtagctatga atttaacgct
    55201 attggcctac gctactttaa tgtctttggt cgccgccaaa atcctaacgg agcgtactcg
    55261 gcagttattc ctcgctggat actatcgctt cttaaagatg aaccaattta tatcaatggc
    55321 gatggctcaa caagcaggga tttttgctat atagagaatg tgattcaggc caatctatta
    55381 tcagcaacaa ctaatgattt agcctctaaa aataaggtct ataatgtggc agttggagat
    55441 agaacttcgt taaatgagct ttattatcta attcgcgatg ggcttaattt atggcggaac
    55501 gaacaaagta gagctgaacc aatttataaa gattttcgtg acggtgacgt taagcatagc
    55561 caggcagata ttaccaaaat aaaaacattt ctttcatatg agcctgaatt tgatatcaaa
    55621 gaaggactta agcagactct aaaatggtat atcgataaac attctacttt gtattcctcg
    55681 gtataactac tcactttcct ttcacgtgga tgaatttaat gaaatcgtca gggatgttta
    55741 cgcttacagc cattggcagt tgccgtattg tgagtccggt aaaacgagct cagccttatt
    55801 ttaattttca ggcaaacttt aagagaatat atggttttac gcatacgagc agcgaggcat
    55861 tacagcagat tcggtttatt ttgggcttga tagacattcc tgaaaaggtc cgaccattta
    55921 tttttagacc taatgtaaac tattcaaaca ccgacgtaca tagtcgttct gatttctata
    55981 tcattgagat ttcaagtcag aagaagatta tggcctatgg gttctgctta caaataaatt
    56041 atttaactcg tcatttctat gaatttttta gccaaacaga gcgggcgtgc atgtactggt
    56101 cgttggccac gcaaggaaat cgacacaaac tgctggccta tctcaaagac gatccctgtt
    56161 ttgccggaat gtcggaagac gatcgtgcct tattaagcaa tatcaatgtc gagcagatgg
    56221 atgagcatgc tatcgaacag gatatgatgg aaatcgttca gcttcttggt cgcgatcgcg
    56281 ttatgtttat gacacatgtt gatgccgtga ctcgtgctgg aaccgtcatt ctatcccgta
    56341 gtcggttgat taaaaatgtc gacaccatcg ccgccaggat ggatattccc tgcgttaacc
    56401 cgacaaattt gatggaaaag tgggggcaga aacgagccct ggaaaaaaat ggcgacgatc
    56461 ttactcatta taccgatatg tttggtgacg cgatcgttgc ggctattttt aagggagtga
    56521 tcaataatac taatcatcat cttgatgagg ggcgacaaga gaaacaggac caaatacgtg
    56581 agattacctt atcgatcact aagcagcttg cagatggcga cattattgct gcatcacaac
    56641 aactttttgc cgcattaaga aatcagcagc aagatcccgt tctaatccaa cttcggtccg
    56701 taatcttcag ccatttaggt tattatgaac aggcttatca ggatattagt gatgttgaga
    56761 aaattatcgg tacgactgac agtacattac gttgtcggct gaggtctcta catggattag
    56821 cgcgttggcg ggaagcctta tcgacggcag agatgatgct ttccaatgaa attgaagatg
    56881 aagaagtcct taccgttgcc gccggctcag ccgatgcttt acagctgttt gataagtcat
    56941 atcattattg gaaacgtgta ctattattga atcctgaaac tcaaagcgga tgggttaatt
    57001 tcctgagcag cacgcaatat ttcaatgatg gcaacgcatt ctctgaagct ttccatgccg
    57061 gcattcaatc gcagcgccta aatgatacgt ttatggaaac ggcgttatct ttggcaatca
    57121 aattcagtga tgaattgatt ttcatgcatg cgctcgagca gctactccgc catgagtcag
    57181 aatttgcgct gacggtattg tcgacgattc atgataccgg tctcgttatc cgcacagctt
    57241 tctgcatcaa gaatatgagc tatcatcaag cgcttcgcac ctcgtataaa gataaaatcc
    57301 acgacgtttt tgaggcatgg aacaataccg cgctgtcgct acattcggtt gatgattttg
    57361 tctcactgag tacttcgcta gcctatagct actctgcatt tatggtttat ccccattcac
    57421 gtatttctcg ctttaataat gaagttaaaa tggcatggcg cgataaatta agagaaatgt
    57481 atgagcgtga ggattatgaa aatatcctgg caggggcgaa aatagtgtgg ccacttctga
    57541 agtttgatcc cgttggcacc gtatattgtg caagaacgct ggtgaatctt ggtgcctgga
    57601 aagacgcgtg cacgttggcc cacatgacct tgattcgtaa ctcgaacatt accagcctgc
    57661 agtcgattat gttacgcagc atacgtcata ttaacaacat tccgttcctc attgatttga
    57721 ttgctaacgt catgagcatt actctatcat tccagaatgc ctcaatgaac aagttgtttg
    57781 agaaagagtg tcgcaatgtt gcaaccagag cccttaaata tgtacgccag aagaaaactg
    57841 aagggcgtct ggatgaagca ttgtctgtat tgattagcct gaaacgaatt gagcctgatg
    57901 tttctcgtct gatgcgtgaa tataagcaaa ttatcagatt atttaatgag tcacggaagg
    57961 atggcggtag cactatcacg tcttatgaac atctagacta tgcgaaaaaa ttactcgttt
    58021 ttgatagcga aaatgcctat gccttgaaat atgccgcatt aaatgcaatg catttacgcg
    58081 actacacgca ggctttgcag tattggcagc gactggagaa agtgaatgga ccaacggagc
    58141 cggtgacaag gcagatctcg acctgcataa ccgcattaca aaaaaataca tcagggaagt
    58201 cgtaatgatt acgcaggaag aaaagttagc tgcactagga aaaacgtgtt taacattaaa
    58261 acaagagaag aagcttgcgc aagctgttgc gttaattgac agtgaattac cgactgaggc
    58321 tttaacttca ttagcgatgc taaaaaaagc agagtttctt catgatgtca atgaaacgga
    58381 gcgtgcatac gcgctctacg aaacgctgat tgcacaaaac aatgatgaag cacgttatga
    58441 gtatgcacgt cgtttatata atacggggct agccaaagat gctcagctaa ttcttaaaaa
    58501 ggttagcaat ggtgtgcaga aaaaatataa caattattta ggcaaaataa ataagatctg
    58561 tgatttgctt gaacgccttg aagggaaagc gatccctgtg gggaccaaca cctgtattat
    58621 tgcaatgaag catgccatct tgttctatag aaatcgtcaa cccaggcagc ttcccgtcgg
    58681 gtctttcggt cgtcttgcgc tctgtactgg ctcgctaggt agcggtggtg cagagcgtca
    58741 gatttccagg ctggctatcg aaatcgccag aaaatatcgg caaaagggga aaattggcgg
    58801 cctgaaagta gaagaaccgg tagaactaat tattcgctcc ctgacaccgg aactcaggca
    58861 agactttttc ctgaaagaag tgctggaaga acaggtcgag gttcttgaaa tcgcgaagat
    58921 taccggaaac ttgtttgacg atgcgacaat agaatctcca gagttgcgct tattgctatc
    58981 gcatctaccg ccggtgtgta aatacggcat caagcatctg gtcccccatt tatgcgagcg
    59041 caagctggat tatctctccg tttggcagga tagcgcttgt ctgatgattg cgcttgcagc
    59101 attgattgct ggcgtgccca gaattcaact gggattacgt gggttaccgc cggtggttag
    59161 aaagcgtctg ttcaagccgg aatatgagcc tctctaccag gcgctggcgg tcgtgcctgg
    59221 cgttgatttt atgagtaaca accattgtgt gactcgccat tatgccgact ggctgaagtt
    59281 ggaggcgaag cacttccagg ttgtatataa cggcgtctta ccgccatcta ctgaaccctc
    59341 ttctgaggtg ccacataaaa tctggcagca gtttacgcaa aaaacccagg atgcggacac
    59401 gactattggt ggcgttttcc gctttgtagg cgataagaac ccttttgcat ggattgattt
    59461 tgcagcacgc tatttacaac accaccccgc cacgcgcttt gtgctggtag gcgatggtga
    59521 tttacgcgct gaagcgcaga aacgcgccga acagttaggg attctggaga gaatactatt
    59581 cgttggcgcc tcgcgtgacg tagggtattg gctgcaaaaa atgaatgtat tcattttgtt
    59641 ttcgcgttat gaagggctac ctaatgtgct tattgaagca caaatggtcg gggtgccggt
    59701 gatttcaacc cctgcaggtg gatcggcaga atgctttatt gagggtgttt cgggtttcat
    59761 tcttgatgat gcacagacgg tcaatcttga ccaggcttgc cgctatgcag aaaagttggt
    59821 caatttatgg cgcagcagaa ccggtatttg ccaacagacg cagtcatttt tacaagaacg
    59881 cttcaccgtg gaacatatgg tgggaacgtt tgtaaaaacc attgcctctc agcctcgtta
    59941 attaatgggc atcatttttc agctatttca tttataaaat aagttatgaa aaaaatcatc
    60001 atattactaa cgacattttt cctgctttcg ggatgcacta ttcccagggc ggtatttaaa
    60061 tccagcctta ttaatcagga cgatcctcgt tataatctgg tcgaagtcac gccgacatta
    60121 aaactaagcg ctcccgatac tgtgccgaaa actattgtcg atccggtttt tgccgcaaat
    60181 aactggcact ggacatcttt ggctaaaggc gatgtgctgc atatcactat tttatcctcg
    60241 ggcggggctg gatatttatc caataacgcg agcggcgacc gtgcggattt tgaaaatatt
    60301 cttgtgactg acagtaatac cgttcaggtg ccttatgccg ggacaatccc ggtttctgga
    60361 ttggatgtga cgcaactggc tgatgagatc aaaaagcgac tttcgcgcgt tgtcctgaat
    60421 cctcaggtga ttgtgacact taccgcccgc accggagcca tggtgacggt cgagggcagc
    60481 gggaaaacgg gtcgataccc tctcgaacag agtatgaatc gtctgagtca tcttttggca
    60541 acggcagtgg cagtagaaaa taccagcaca gatatgatgg aagttcacgt gacgcgccag
    60601 cagcattatt tcactgcgcg actgtcagat atttatcagt atcccggatt ggatattgcc
    60661 ttacagccgg atgaccgtat cactctgcgt caagtgaccg agtatgttaa tgtgctcggc
    60721 gcagcaggtg ttcaggggaa acatgctctg gttcagcgtc attccagcgt cgtggatgct
    60781 ttggcgctcg cgaaaggatt aaatgacaat cttgccgatc cgcaagcgat ttttctgtac
    60841 aagcataacg aagcggaaca ggcgaaacag cagatgcgta agctgaatat ctatcatgtc
    60901 gatatgagcc aacctaactc ggtgttttta gcgcaggcca tacgagtgga caacggcgat
    60961 gttatctata tctcgaacgc ctctttgact gatttcgcta aggtgaaagc cgcattcgat
    61021 agctttttga cccgcggcac taattctttc taatgtcgcc atatgaatat tttgaaaaat
    61081 aattcttatt attttatgaa actcattacc gtctgtgagt taattatttt attgatgtca
    61141 cgcgatatca aaacacgcta taacggtaat ttactaaact atatgatggt gctggccgta
    61201 ccactggtat ggatatccat taccgttatt tcttttcaat atttaaatcg ctcggtgcca
    61261 atatccactg acgatatcag ttttgttatt gcagggatat taccgtatct gttatttcgt
    61321 tataccatta ccgcaaccat gcgaacccat tcattctcta catcgttagc ggttgtctcg
    61381 caggttaaga aaagacatgt gattttttct cttgccgcaa tcgaatttgt taatgcagtt
    61441 atcatttata ttattatttc attaattaac tttcttatat tctcccgttg ggaggcccaa
    61501 aaaccgttcc tgatttttga agggatggtt atcgcatggc ttctggggtt atcgtttggt
    61561 tacttttgtg acgcactgtc tgaacggttt ccgctggtct acaaagctgt tcctgtgatg
    61621 ctaagaccga tgtttttgat ttcggctgtc ttttatacgg cgaatgaatt gccttattca
    61681 ttattaagca tattcagctg gaaccctcta ctacatgcta atgagatagt cagagaaggt
    61741 atgtttgagg ggtatcactc cttgtacctt gaaccttttt accctctggc attttccgca
    61801 acgttattcc tcgcgggcct catttttcac ctgatttgtg acactgaaaa tcactgactt
    61861 tagcttcagg agagacgcat tcgtgttcgg tttattaggt tgtacacgct attttgagtc
    61921 tgataagggc ccgcgggtgg tccttgataa aacagatttt gtcatgggct accatgagca
    61981 tatcggtatt ctggcggctc ctggttcagg caaaacgacg ctaaccaggt tgctgtgtgg
    62041 cctggatgct cctgatgagg gggattttat tgggctacgg ggtgatgcgc tcccactggg
    62101 ggcaaactct tttattctgc cagggttaac cggtgaggag aatgcgcgaa tgatggcaag
    62161 tctatatggc ctggatggcg atgagttttc acatttctgt tatcaattga cccagcttga
    62221 acagtgctat accgacaggg tgagtgaata ttctgtcacg atgaaaacgc atctggcatt
    62281 tgccattaat ttactgcttc cctgccgcct ttatattgct gatggcaagc tgtacaccgg
    62341 ggataatgcc acacagttgc gtatgcaggc ggcgctagct tgtcagctgc aacagaaagg
    62401 gttgattgtg ctaacgcaca accctcggct tattaaagaa cactgtcatg cgtttggcgt
    62461 actgctgcat ggaaaaatta caatgtgtga agatttagcg caggcaactg cgctttttga
    62521 acaatatcag tcaaatcagg cgacgattca aactgaagat tattcctttg atatataatt
    62581 agtaaatata cggatagagt gtggaaaatt cagaacgtat taaaaaatgg aaagaagaaa
    62641 gagcgaaggt agcacaagaa agccgagcct cgcggctaca acaaaaagag gatgaacgcg
    62701 cccttcgcca gacggaaaaa tcggccgatg caaaaagtca tcataaccca gacgccgggt
    62761 ggtctgcgac ggatgctgat tctgtccgta gagcgtcatt agttattaaa gagcgacgtg
    62821 ttcagcaagc caagcaatcg ctacgtcggc tctttcttta tattgctttg ccgctgctgg
    62881 ttattatgct tatgtcgtgg attttaacat cgcattttta tagtgcggat gccaccttta
    62941 ttgtgcaaac tgatgccagc caggataatt tttctggaac atctttcttt ggtgcaggca
    63001 ataagatgtc ggagggcttt caggttcgcg agtttatact ttcgaaagaa atgatggatc
    63061 ggatggaaaa agagctcggt tttttatctt atttcgcgca agacgatatc gcattatttt
    63121 cccgcttcca cgcgccgctg ggtattaatg atgatcctta tcgttactat ttatcaaaag
    63181 tctcggttgc tgtcgatatt caacagggca tgctgcgttt aaacgtgaag gcacggagtg
    63241 cgaaacaggc tgagtttttt gcccagcgca ttctgtcttt tgctgaacag cacgttaata
    63301 ccgtttcagc gcggatgcag aaggaacgga ttttgtggct ggaaaatgat gttaaatcgg
    63361 cccaagagaa tctgggggca gctcgacttg aattgctaaa aatacagcat atacaaaaag
    63421 atattgaccc gaaggaaacc ataaccgcta tttatcaatt aattgctggc tttgaaacgc
    63481 agttggcgga ggcgaaagcg gaatacgcgc aattaatggt gaatggtttg gatcagaacc
    63541 cccttattcc tcgcctgtcg gccaaaatca aggtactgga aaagcagatc ggcgaacaac
    63601 gtaaccgctt gtcaaataag ttagggtcgc aaggctcttc agaaagcctg tccttatttg
    63661 aagatcttcg cctgcagagc gagatcgcca aagcacgctg ggaatctgcc ttacagacct
    63721 tacagcaagg gaagcttcaa gctctacgtg agagacagta tttgctgatc atttctcaac
    63781 cgatggctga gtctgacacc actcgctatg ccgatggaac aaagtggtta ctgttcttcg
    63841 tgttgctggg catcacgtac ctggtgactt ctctcctgat aaccatcagg cggatgcgtg
    63901 aataaggctg agtaaggaaa tataatgagc ttgcactcta catttaaaaa aatatcgcca
    63961 accaccctac tcaaacaaga ggattgggag gggctatgcc tctatttcag tcagcatccc
    64021 gaaaaagtgc gagatagtgc tggaaatgag caaaacatta ttctcttcgc tatcgcgtgt
    64081 ttgcgtaaag atgaaacaga tgtcgggctg actttgttgt ctgaccgtgt gctgacggca
    64141 aagaatggcc gtgatttatt acgacgctgg gttatttcgc cactggcatc atctcaaccg
    64201 gacgctgtac tacaggtagt taataaactg ctggcggtga atgtgtgcca gccggaggat
    64261 gtcctgctgg tcgcgagcgt gctgcttaag agtaaacaat atgcgactgt tgctgactta
    64321 gccgagcagg catggctcgc tttttcggga aatagccaaa tttttgccct ccatttgcgc
    64381 acactggtac tgatggataa agagttacag gcaatctcgt tggccagaac acaggcgcag
    64441 gaagttcccc cacggggaga tatgattgcg acctgcctca gtttcttaaa taaaagccgc
    64501 ctaccagaag atcatgacct ggcccgcgca ttgctccctt tcttcgcgtt agaaaggcag
    64561 gagtcggcgg ggctggcggt tgatacgctg tgcgctgtcg gtaaatatca ggaagccatt
    64621 cagacagggg aatccgcatt agcccgtggg ttggatggtg cagcactgcg tcgtagcctg
    64681 gggcttgctt actatcaatc cggtcgcagt cgggaagcga agcttcaggc cgctgagcat
    64741 tggcgtcatg ccctgcaatt taactctgat aatgtacgta tcgtgaccct gtatgccgat
    64801 gccttaatca gaacgggtca gaatgagaaa gccattccgt tactgcagca gtcgctcgcg
    64861 actcatcctg atcttcctta tgtcagagca atgtatgccc gagcactgcg ccaggttggg
    64921 caatacactg ctgccagcga tgagtttgta caactggcaa gggaaaaagg ggtgacgagt
    64981 aaatggaacc gttatgccgc ggcggcattg ttacaggcgg ggaaaacaag cgaagcggaa
    65041 agcgtctttg agcactatat tcaggccaga gcaagtcatc tgcctcaatc attcgaagag
    65101 gggctgctgg cgcttgatgg gcaaatatct gccgttaatc taccgcctga gcgccttgac
    65161 tgggcatggg aagttgccgg cagacagtcc ggtatcgagc gcgacgaatg ggaacgccgg
    65221 gcgaagtggg gctatcttgc tgataatttt ctcctcgact ggcttgaatg tcggggagag
    65281 caggctgatg aacctatgta ccgattggcc gacatatcgc atgtcgaaca gtttttccaa
    65341 cggctacaac tcgatcagag aggctgcatt attgtatcgg ctcatctggg cgcaatgtat
    65401 gccgggccga tgatcctgtc cttactggag atgaacagca aatgggtggc ttccactcct
    65461 ggcgtgctca aagggggcta cggcgagcga ttgatttcgg ttagcgataa aagcgaagcg
    65521 gacgtggtca gggcctgtat gcagacctta catagtggac agtcgcttgt ggtggcaata
    65581 gacggcgcgc tgaatttgag tgcgccgact atcgactttt tcggtcagca aatcacctac
    65641 tccacatttt gctctcgtct tgcctggaaa atgcatttgc ctaccgtttt cagtgttccg
    65701 atatggaaaa acaggcatat ccattttgtg cttgagagga tggtcgatcc gctgaaattt
    65761 gaaagccagc tttcatttac cgaacgttgg aaggagaatt atctgcagtg tgttacccgg
    65821 atcctgcaaa gcgatccgga aaatctgcgt ctttccggtg ggatttggcg aaacattata
    65881 cgtagggata gttaataagc gatttaattg cggtagatga aaatttgtac ttcagagctg
    65941 aaaatgtggt attaacccag atatcagtct gcaagttgca agtcaccatc agtagcacaa
    66001 cgagtcccct caaacaggct gtctgccatg cctttgactc tgttatatat ttttcagctt
    66061 ctgtcagcct tgcatctcat aaaacattcc tgacatttat attagggccc tatcccaatt
    66121 cgtgtttttg aacattgccc ctccctgaat catattcccc ccggcagctt taatctacca
    66181 gggggatcct tattcgctag cgtgccatta acgcaaagac accccagcct aagtattcac
    66241 gtgtgtaatt gacatggcgt ttgggcgcaa cagtcagctc ctttcggact tcctgtacaa
    66301 aatcatcatc agggttatcc tccagccagc gacgcatggt tagccatttc gccgcctcgt
    66361 atctgtccca gccttcctgg tctgccagaa ccatttccac cagatcatag ccccgctcgt
    66421 caaaagaggc tacaaggccc tgcagggtga ggaagtctgc cacggatgag acgccacaag
    66481 cctgagcaat ctcttccgtc ggaggtacct gacgccagta tggttcaccg ataagcataa
    66541 ttcctcctgg cttcagactc atggccagaa ggttcatcgt ccctgcgacg ccgcctgcaa
    66601 tccaagttgc gccaacgcag gccgcgatat cacattgttc atccgcgacg taacccgccg
    66661 cgtcattatg cacaaaatga acgcgttcac tgacaccgag ctcttctgct cgtaacttgg
    66721 cctgcgcagt aaaaagtggg ctcatatcga tgcctgtacc ggtaataccg taatcgcgtg
    66781 cccaggtgca aagcatctca cccgagccgc tgcccaaatc gagaacgctc atgcctggtt
    66841 tcatgcgcaa cacgcggccc agcgtggcgt atttttccgg cgtgaacggg ttatgaatgc
    66901 ggtgttcgct ttcgctgata gtaaaaatac gtggaatatc cattaattta ctcctttttt
    66961 tagctgtgta ttcagggaac gcccttccgg ggattttgat ttttctgcca gcagagcaaa
    67021 gagcttgccc tcaaaagtct cgctgaccgg ccactcgcta ctgtccgggt gtgatagtat
    67081 tttgaagccc gcgttaccga gcaaactggc atattcgtca tcgcgccagg ccgtcatctg
    67141 actgccaaaa cggctaatgc gaccgttttc atctatcgcc cagaactgcg ttgagctggt
    67201 ctgcgtttct tcatcccagg cgttttccgt cagcagcaga tgagatgccg caaggaacag
    67261 tccgtgcgga caacgctgcc agctcgccgg cgccataccc tgacgtttaa cttcatcaaa
    67321 agtatgaact tcaacaaaca gcctgccgcc tggtaccagc caccgggcac agcggctgat
    67381 aagggtctga gcgtcagtgg cactgaaaac atttagctct ccaaacgtca tcatgatgaa
    67441 ctcgaactgt gtctccggcc agtaggtgcg aatatcctgc cggatgtagt caatgctcag
    67501 accggcggtt tgcgcctgct gacgagccca ctcgatggat gccggtgaaa aatcaacgcc
    67561 cgtacagcaa tatccacgct ccgccagcaa gtgggtgtat aaacccgggc cgcagccgat
    67621 atccagaatg cgtgcaccaa ccagtagctg acgggcaatc cacccaacct gctgttcaat
    67681 tacgatctgt ctgcggctgg cccagtcatg atcctgcgac agatggtttt ccagcatgcg
    67741 ctggctaaac gccagctctt cccagggtat tttactttca gctgcagaca gctgcagccg
    67801 accggaggaa gaaatgagag tactgatatc cataatgctc tccttaacgg ttatcgggct
    67861 gtgagcgaac gttgttcagc ccggtggtgt tgatgcggta aggctgaccg ttgacggact
    67921 tgatcagttt tttggttttg agctttttga aaacggcgag agtacagtcg gcgagcaaca
    67981 gcccttcgcg gctgtagcat tcaacagagg taacgcgacc agaagcatcg cgaacgtgca
    68041 caatacgtcc accttttgcg agcacatgta aggtacgctg ttcctgacgg gataaattca
    68101 tactggaaaa cctgttaatc aacatgagca aaaacgagcc aacatccgca gatgttcgcg
    68161 taaagtttaa gcgcagcgat aatcagtccg ttctgagcag aacagaaaac tgattatctg
    68221 atgattacat tctccagcat caaagcctcg gtgagagttg aaaggtattt acggcatgaa
    68281 taataacaac tgttttttgt aatgaaaaca caggagagaa aaaatgtgat gcgggaggaa
    68341 atttcagaag gtaatgctgg cgacttttat tgccagtaag tgaacttgtc agcccgcatt
    68401 aggttctgat cggtcgcggt cggactggaa aagaagaagg ccactttggc tttctctttt
    68461 ttgacctcat ttgcggccat atcgaccagt atgccgccta actgtgcagg gcttgtggga
    68521 gacgtcggtg ttctggtagc tcagaccggt tatcccccgc taaaacttat ctgcgtacgc
    68581 ttatatcagt actgtgggct ctgcattgtt cagtattaaa gactactttg gagtaaactt
    68641 taattcccgt tgcttcagcc acttatcaga aaaatcctgt catcgatttg aacgtggaaa
    68701 cttatacctg catactgtat atacatacag ttattttgag gtataacatg ctgcacttta
    68761 ttcccatagc atccattcct gaagcactga caatcccttt gtttacagag agatgtgctg
    68821 ccggttttcc ttctccagca actgactata cagaagaaga gctggatctg aatgcgtatt
    68881 gtatacgtcg ccccagttca actttctttg ttcgggccat tggtgattcg atgcgggata
    68941 tggggctgca ttccggtgat ctaatggtgg tcgataaagc cgaaaagccg ctacagggtg
    69001 acatcgtcat tgcagaaaca gaaggtgagt ttacagtcaa acgtctgcaa cttaagcccc
    69061 gcatcgccct gcttcccatg aatcctgcat accattttta gtatagttaa aacagtgttt
    69121 tatgtttaaa aacagcgagt tagtattatt aagtatttgt ccgttttacg cgtttttaat
    69181 gccctgccgc caaaatgccg ccataaatta gcgcttccaa ttgaggttgt gaagcgggtt
    69241 ttttgtcacg gcatcttcga ggtggtcagg ggcaaagtga gcgtaaacca tcgtcatttt
    69301 tatatcggca tggcccagaa tatcgcgcag taccagtatg tttccgccgt tcatcataaa
    69361 atggctggcg aatgtatggc gcagtacgtg agtgcactgg ccttctggca gttcgatacc
    69421 agctcgcttt actgcacgct caaaggattt tctgcatggc gtgaataact tccccctgtt
    69481 tttagggagt tcatcataca gttcctgaga tattggcacg gttcggtttt tcttgccttt
    69541 ggtcttggta taagtgatgc ggtattttga tagctgatgg ccctgcaggt tttcggcttc
    69601 actccatcgg gcgccagttg ccaggcatat ttttgcaatc atcagcaaac tgggactctg
    69661 cgaatcagca caggcatcca gtagacgttt aatttcttcc ggtgccagga acgccagttc
    69721 gccctctgcg attttgaatg ttggcagccc agcgagcggg ttgggtgctg gccagtggcc
    69781 cagctttttc agtgtgccaa aaacagatga taggttacgt tgttcaaggt ttaccgtacg
    69841 gggcttaact ggcgacataa gcacgccatc ttcatttttt acttcacctt ttaaccgtgc
    69901 ttcccggtat ttcgtaaaat cgcctgcggt taactctgag gcaatgggat cgcccaaacc
    69961 attacaaata atgctgagtt ttgccaacag gcgtttgggg tctgccagcg tctgcccata
    70021 aagtgaatgc cactgctcaa tcacttctga caaatgccgc cgatcttctt tctcccccag
    70081 ccacggtttt ttgttcacct catccatggt gtggttttcg aatgctatgg cctcgccttt
    70141 agtcgcaaat tgcttgcgta cacgcttgcc atcccgtccg ttcgggtagc attcacacaa
    70201 ccattttccg ttaggctgtt ttctgatgct cataagttag aggctcttga ttactttgac
    70261 tgcacgcccg atagcttcaa tgtcgtcgac cgagcattca aatgatgttt catcttggtg
    70321 aactacaatt ttgttgcctg gaacgcgagc gattttgacg atgcttttaa ctccgtccat
    70381 atcgactaac cagaagccat tactgacttg tttaacagac gtatccacaa caaagctatc
    70441 agtagctgtt tttacaaaca aagagttgga tgagtcacca tcgagcagtc tgctatcaag
    70501 aagaatttca tcacttggct gcagttcacc gttcttcagt tcaacatgtt tgatgctagg
    70561 agcaacaatt ttagaaagtg gtcttaccgt gacggaggtt tcgtttttga gatttctttc
    70621 ttcgttctca cacgcataca tatctccttg gcccgtagcc agccatagaa gggaaattcc
    70681 tgtttcaaga gcgcattgaa ttacccattc agcagggaaa ctatccctta agtatctgtt
    70741 agccatagtg ctttttgata cttccagatg ttcgcagagc tgctgtcgtg agctgaaatt
    70801 gtaagcctta ataagcctgt taatcgcatc gcgcccacca ctatcattcc ctgccttgat
    70861 taaactcata atcaaacctc ttgacgtata taaaaagtga tcttaatatc cgctcatggt
    70921 ttgaaaagta aaatcaaacc acataaaaca agataaaacg aacccaaact aagagatact
    70981 gcactatgag tactgatatt tcaattcgtg taccaaaaga gatggcaacg cctgctgagt
    71041 tcgcggagtg ggaaggtatc tcccgtggct cggtgtatca aaaaattcac catggtcagc
    71101 ttgctaagta catggtgaag aaagaaaaaa ataaaggacg tgtaagcctg cggtacctga
    71161 tgtacaaaac cgaccaggtt cgtgagtctc tgggtcattc caacttccgc gtcattgttg
    71221 gtcagtaagt tcgattatga gaactttcta aggggcttgc atgtttgatt ataagatttc
    71281 caaacatcca cactttgacg aagcctgccg ggctttcgcg ctgcgtcaca acatggcgaa
    71341 gctggcagaa cgcgcgggaa tgaaagtcca gacgctgcgt aacaagctga acccggaaca
    71401 accgcatcag ctcacgccgt cggagatctg gctgcttacc gatattactg aggactccac
    71461 gctggtagat ggtttcctgg cacagattca ctgcctgcca tgcataccga tgaacgaagt
    71521 ggcaaaagag aagctgccgc attacgtcat gagcgctact gctgaaatcg gacgtgttgc
    71581 tgccggtgct gtatcgggtg atgtgaaaac tactgcaggc cgccgcgatg ttatcagtag
    71641 catcaactca gttactcgtc taatggcact ggctgccgtt tccatgcagg cacgtttgca
    71701 ggctaacccg gcgatggcaa gcgcggtgga taccgtgacg ggcctcggcg cttcattcgg
    71761 tctgatctga ggtggctatg ctgactaaag aaccatcttt tgcatcactt ctcgttaagc
    71821 aaagtcctgc aatgcactgc ggtcatggct ggattatggg gaaggatggc aagcgctggc
    71881 atccgtgccg ctctcaggat gcgttgctgg ctgagctgtc cgctaaaaag caggggaaac
    71941 catggctatt gaaggtgatg ctgcgactgt tccgctaagc gctggcctcc gtcttaatgg
    72001 gttaaaccac atcgcggaat taagggcgaa agtgtttggc ttaaatattg attcagaact
    72061 ggatcgcttt attagcgata tgcgggacca acgggatatt aaccatgagc agaataaacg
    72121 cgcactagcc gcaatattct ttatggcaaa gattccggcg gaacgtcata gcgtcaatgt
    72181 tagtgaactg acgactgacg aaaagcggga gctgattaaa gcaatgaacc atttccgtac
    72241 agtggtgagt ttatttccaa atcggctagc catgccgaat taaccaacaa ccgaaattaa
    72301 aggcgtaaac ccgccgggct tcttattgcc caaattcagg agaaacaaca atgcgaaata
    72361 ttgaaacccg aatcaccaaa acaggaccag atgatgctgg ccttaaccag atgctgactg
    72421 atgcacgcat ggaagaacgc cgtggacgcg ctgatgtgat ggcagcacgt ctggactctt
    72481 tggctgcccg tatcgtgtca cgtcagctta accacacgga agcggctgag ctgctgcgtc
    72541 aggaagcggt gaagattcag aacgaagcgc aggagatcca ctgatggctg attcaatgga
    72601 cctcgtacag cagcgcgttg aagaagaacg ccagcgccac attcacaccg cccgcaataa
    72661 aacgccgggc gtttcccgtg ttctctgcat tgattgcgat gcaccgatcc cgccagcacg
    72721 ccgccgcgcc attccgggcg tgcagtgctg cgtcacctgt caggaaatcg cagagctgaa
    72781 aggcaaacac tacaatggag gtgctgtatg aataccgata agatgacaat tagccaacgt
    72841 gcaaatcaat ggcttgataa tgactactta tttattgata ccgaaacgac cgggttgggt
    72901 gatgatgcgg aaatagttga aatatgcatt attgatagtc atgggtttat tatgcttaat
    72961 acgcttatta agcccactaa gcctatccct gatgaagcaa tagcaattca tggaattact
    73021 aatgaaatgg ttgcttttgc ccctgcctgg actgatatat gcggggcagt ggaggaacta
    73081 tttcggcgct ttgggtttgt tatctataac gccgattttg atctccggtt aattcgtcag
    73141 acctacgcat tgaatgaaag accttctgaa ggtgcgccat ggatgcttgc tgctcattct
    73201 gtttgcgcga tgaagcttta tgcagagtat cgaggcgagc cgggacgatt taatggctat
    73261 aaatggcata agctggttga tgctgctgcg catgaaggtg ttgtagttga aggtaaggcg
    73321 caccgtgctt tagctgattg caaaatgacg ttagggcttg tccgtgctct ggctaaaggt
    73381 ggtgctaaat gagcaccatc ctgaaatggg cgggaaataa aaccgccatc atgccggaac
    73441 tgattaagca tctgcctgca ggtcagcgac tggtggagcc gttcgccggt tcctgtgctg
    73501 tgatgatggc aacagactat cctcattatc ttgtcgcgga tattaatcca gatcttatca
    73561 atctctataa aaaaattgcc cttgattgtg aagctttcat atcacgcgca aagaatattt
    73621 ttgcgattgc gaatagagaa gttgcttatt acaacattag gcatgaattt aatcattcct
    73681 ctgaaattac tgatttcatg aaagcagtat atttccttta tctcaatcgt catggttatc
    73741 gtggactgtg ccgctataac ctgagcggtc attttaatgt cccttacggt aattataaaa
    73801 atccgtactt ccctgaaaac gaaatacgtg cttttgcaaa aaaggcacaa cgcgcaacgt
    73861 ttatctgcgc cagctatgat gagacgctgg caatgctgcg ggcgggggat gtggtttatt
    73921 gtgatccgcc atatgacggc acatttagcg gttatcacac tgccagtttt accggggacg
    73981 atcagtacca tctggcgtct attcttgaac gccggtcatc agaaggtcat ccgattattg
    74041 tgtccaacag cgacacctct ctgacacgtt ccttatatcg taatttcacc cgccaccgca
    74101 tcatcgcaaa gcgcagcatg ggtgtggctg caggtgatgg taaatctgca acagaaatca
    74161 tcgctacgaa gttagtgcgc tggttcggtg ttgatttggc gtctggtcct gatgtctcgg
    74221 tggaaactga ggtgcgggcg tggcagtgag taaaatcaca ttacattatg cacaaaccac
    74281 cggcggctcg aatgaggccg ccgcagcctt tccatggaat accccaaaaa aagcggttaa
    74341 cccgtatctg gacccggcgg aatttgcgcc ggagtctgcg ctttcaaacc tgatcgctct
    74401 ttacgctgtg gataacgagc aggagcagtt gcgccgtgag acgctgagcg atgaggtctg
    74461 ggagcgctat ttcttcaatg aatcccgtga tcctgtccag cgtgaaatgg agcaggatcg
    74521 gctgattaac catgccaaaa cggcgcgcga gcagcagcgt tttaatcccg atctggtcat
    74581 tattgccaac gtgggcgccc aaccggcgca tatcagcaag cctctgctgg agcggattaa
    74641 atatttccat agtctgggca gagcaaaagc ttattcccgc tacctgcaaa aaacaatcag
    74701 gccgtgtctt gagcggctgg agcgcgtgcg cgacagtcag gtatctgcct ctttccggtt
    74761 catggcgagt catgacgggc tggaggggct gctggtactc cctgaaatga atcaggatca
    74821 ggttaaacgc ctatccacgc tggttgcggc acatatgagc atgtgtcttg atgcagcctg
    74881 cggtgatctg tttgtcagtg atgatgttaa accagaagaa attcgtcagg catgggaaag
    74941 ggttgctgca gaggccatgc gccttgaggt catcccgcct gcgtttgagc agttgcgccg
    75001 caaaaagcgc cgccgtaagc cggtgcctta tgaactgatc ccaccgtcgc tggcccgtat
    75061 gctgtgcgcg gactggtggt atcgcaaatt gtggcagatg cgctgcgagt ggcgggagga
    75121 gcagttgcgc gccgtctgcc tggtcaacaa gaaagcctca ccgtatgtca gctacgaagc
    75181 cgtgatccac aaacgcgagc agcgccgcaa atcgctggag ttcttccgct cgcatgagct
    75241 gatcaacgaa gacggcgaca cgctggacat ggaagacgtg gtgaacgcca gcaacagcaa
    75301 cccggcgcac cgccgtaatg aaatgatggc ctgtgttaag gggctggagc tgatcgcgga
    75361 aatgcgcgga gactgcgcgg tgttttatac catcacctgc ccgtcacgct tccacgcaac
    75421 cctcaacaac ggcaggccta atccgaagtg gaccagtgcc actgtccggc agagcagtga
    75481 ctatctggtt gatacgttcg ccgctttccg caaggcaatg cacaaggccg ggctgcgctg
    75541 gtatggcgtc cgcgttgcag agccgcacca tgacggcacc gtgcactggc atcttctgtg
    75601 cttcatgcgc aaaaaagacc gccgttccat caccgcgctg ttgcgtaagt ttgccatccg
    75661 tgaagaccgc gaggagctgg gcgccaatac cgggccgcgc ttcaagcccg agctaatcaa
    75721 cccgcgcaag ggtacgccga caagctacat cgccaaatac atcagcaaga acatcgacgg
    75781 gcgcgggctg gctaaagaaa tcagcaaaga aaccggcaga tcactgcgtg acagcgccga
    75841 gcatgtcagc gcctgggcgt cactgcatcg tgtccagcag ttccgtttct ttggtattcc
    75901 ggggcgtcag gcataccgcg agctgcgctt gctggctggt caggcggcga gagtgcaggg
    75961 cgaacgcaaa gcgggtgcgc cggtactgga taatccgcgt ctggatgcgg tactggcggc
    76021 ggctgatgcg ggctgctttg ccacctatat catgaagcag ggcggtgtgc tggttccccg
    76081 caaacatcac cttgtccgca cggcatatga gcttaacgat gagccgagcg cctacggcga
    76141 tcacggtatc cgtatatatg gcatctggtc cccgattgcg gagggcaaga tttgcacgca
    76201 cgcggtgaag tggaaaaagg ttcgtaaagc cgttgacgtt caggaggcgg cagccgacca
    76261 gggcgcttgc gccccttgga ctctaactgt ccccctgttg aaaatctgaa caaatcaggg
    76321 ggtgatttac ccgatattaa aaccatgaat gagaaggaac tgcaggatta tctccacaat
    76381 atgggccaga aggaacggcg ggaacttaca gccaggttga gactggtaaa accgaagcgg
    76441 aaaacagtat acaaacagaa tatttcggag cagcaacgcc tgcagcttga ggcagaactg
    76501 acagccagag ggtttgaagg tagtgcatct gagattgatt tgcttctgcg tggtggcagc
    76561 attccgtcag gtgccgggct acggattttt taccgcaacc atcgactgca ggaagatgac
    76621 aaatggcgtc agtgatactg acggcaaggc tttaacaatt catgctctta acgaccttcg
    76681 taagaacgtt ctcattgacg gataaaaaat attttacttt tggatatcag gggtacactg
    76741 tatatataaa cagtggatat acatacagtt aatgcgtatc cgaggtcgtg ataggaggga
    76801 agatgcagga ctatattttg gagtcgttga agctccagcg cattgatttt tttattaagc
    76861 ttgtagcggc tagtgagtgc agcgacgaag aaaagcggct ggctatccag tgggtgtcag
    76921 aactgaccga cgagctgatg gcgaaaatcc gcagccatga atactgccgg tcaatggacg
    76981 taaccagtta agggaaatct gtatgcgcat tgaaataatg atcgataaag agcagaagat
    77041 tagccaggct acactggacg cccttgaatc cgagctttac cgtaatttgc gccctctgta
    77101 tcccaaaaca gcaattcgta tccgcaaggg cagcgccaat ggtgttgaac tgagcgggtt
    77161 aaaactggat gaagacaaaa agcgagtgat ggaaataatg cagcaggtct gggaggacga
    77221 cagctggtta cattagcgaa cgttgcggac gataaaactg gtttttaccg tccgcaaggt
    77281 tgaacaacga gccacgtgag gcgttagcgc tgttgtgcat gtctatgccg catgaaatcg
    77341 catgatcgtt tgaggatcgt ttttgctcag gcccgccaga actggcgggc ttttgcttat
    77401 gtcatgcagg tgcatgaaaa ccactacaca aagcgggcag gcgtggcggg gatacgagcg
    77461 cgcgctcagc gtctcacgtt aggtccaaag tccttgcaag caaaaaagct tacctttatc
    77521 tttcaattag aattgtctgc aaaaaagtaa ggaaatcaaa tggcagagaa cggccctatt
    77581 gaagatttgg cgaaacgcat atcggaggat ctactgagtc gatttaagtg gcagcagcat
    77641 ggcccctgcg accgagattt cctttgtgat gatgaggcta aacataagcc tgaaggtaag
    77701 aagcagaagc acacgcatcc tgtagatgtt gtatttagtt ataaagaccc atatttaaac
    77761 aaagttattt atttaaatac tgatttaaaa agttataaag caggttcaat aaatgcgtca
    77821 aaaatagaat ctgcattggc gtcattagca aaaactattg aatgtgctcg ctatagtcct
    77881 gagtggtcag aaaaatataa tttttctcaa attgactgtg aagttcgcgg tttactgttt
    77941 gtttttaatc atgataatca gttgcagcat gatttttatg agttttttaa tcctcccaaa
    78001 cccgctaaag gaagaagaga taaggctgtc aacttagaaa agattccttt atccgcaggt
    78061 cagcaaattc atataatcga tccgtttctg attaattata tgttggcaat aacgaatgat
    78121 atgaatgatt tgattgccaa gaaagagttt cctgatgaag aatatggatt ctattaccct
    78181 caattgactt ttcataaggt tgctgtgact gaaaaatatc ttccagctac tatagaagtc
    78241 ttgtcatcac ctttcatggt tatcaaacat ggtgctgttt ataaatttaa cagagctaaa
    78301 ggtattgagg aggaagttta tccagaaggg tttgttgtgt attacaacaa aaaaggtaac
    78361 agcgacaatg aattctttta tttgttagat attttgtcaa attatcaaat tcttgatggt
    78421 ataaataaaa ttaggataag gctggcatat cgagaaaaag atgagaggat tctctcccat
    78481 tttcaacggg gagttgaaaa atatgcgcat gagtatgggt tagatgaaga agctaaaaag
    78541 aggcttgaag atttagacgt taaagttgtg tctacagtaa aagaattctt ctctgcagaa
    78601 gttatttctt gggagccgaa atgaaaaata ttcacagcgt aactgataaa gctttgtatg
    78661 atgctttaaa ccaaaagcaa attaccctaa atgaaattca agaccttttc ttagagagag
    78721 gaacgattat atgtaaaaaa actcctcgaa aggaattggc aagaaactat tctcgaatga
    78781 ctcatgatta ttacgagcat caaaaaattg caaccctgct aggtggccag acaaggaccg
    78841 aaaaaattac atgtgtaaga attgagactg gtatagataa gaaaggtatt atagacgcgg
    78901 cagaaaaact taagaaagaa attaccgggc aggatgatta ttgtaaaata atcgtggatg
    78961 ggccgcgagt tctgattaat attagatatc tttcaactaa ttatggaaaa agtgatttca
    79021 aacaggctat taataaagag gcgttaattg aaattgagcc tcttgatgat ggttacagta
    79081 tccgtcgtcc agataatgaa aaccttgacg attacgaggg gcttttactg gggcacatca
    79141 gcgctattca gaacgagcaa gcggatgata gtaaccttga tttaaaatta aacgaaattt
    79201 cactctctca caatacatct gctgatgtta gaactttatt cttcgataaa ttaatccgta
    79261 cacttgatgg ctatgagtta ctggatgtta ctgatgctta tgtatatcac cctaagcctg
    79321 aaactataga ggctgaagat ggaaacaccg aaactggagt gcatgtgtct agggcatcac
    79381 ttaggggtga gggggtactt aaatctgatg aattaagtga tctttatgat agaggattct
    79441 atatctggaa aataaaatgg aaggtcaagg agaacttggc agatccagat atatttgagc
    79501 ttgaggccca atttggtgat cctctcaatt gtactaattt ctcatattta gttaagggag
    79561 tcagaaaata taaggcaaac ggacaatatt tcagtaagcc gcaaaaactc tctggtagag
    79621 aaactgagcg attcaataaa ttaattgaaa atagagctta ttctattata atggaaatca
    79681 gctaatacat cataaggagt ggctatgtca caattaagat tgaagtggat gagattgaaa
    79741 atcaggacca gccctgaagc tgtctttgat tttatcaaaa acacgcctta ttctgatgct
    79801 attggtgctg gttttactaa gtatgaaacc attcataatg gtatgactgc aactttcaat
    79861 aaaaaatctg ttgttttaga gccgattgcc gatccatttg gtgaggtgct ggaattcgaa
    79921 agggttgtat ttgatcagat tagtttttct atccaaaccc tcagcaataa gatatgtttg
    79981 ttaacttttt acaatcctcc aaaaacagtt aaacctttta tcgatttttt gtctcaggcc
    80041 gaagggttaa atgttgctta tgggaattta accgtagatc ttaaagcttt catgagggtc
    80101 attcgagaaa atttcggcgt aaaggtgttt ggcatttcca aagtgaaggt gtcaaatctt
    80161 cctgttactg aaaaaacaag agcatgtttg gaattgaatt ctagcggcga tgctttgcat
    80221 gatttgaaga tttttgttgg ggatagtgaa ttcaagctcg ataaaataaa agcaggaggg
    80281 ttttaccttg attcaaagat tagttttgaa ttaaccagtg gggcttctgc agtggttcct
    80341 gatgagcatt tttcgatttt caatgatgct atttcatgta tggaaattga taaattttag
    80401 gggcgatggt gtcatcgtta tatgatggca ccatctttta taataaaatt agcttatgtc
    80461 gtcgagtgta tatttcgcaa atctaatgac ttcatcccct aaccattcat tgagttcttt
    80521 aatcctttct tgaaggggta ttaattcatt tcgtacaaac acgcggctgg ccttttccac
    80581 atcaccaaag ccgccggtat tgttggggat gatgcccatc atctgcggtg gcacgcggtg
    80641 cgctgccatc atgtcatcgc ggctaacgtt cttgatgtta agaaactcat cctttgccgc
    80701 aacttccgac aacgggatga tctggatgcc gtccttttta ccattgggcg agtacataaa
    80761 caggttgcgg aagttgcccg gccctttggc gcttttcatt gcctggcgga tattgttcac
    80821 gtcctcctga ttctgtgctg catcggtcat atacatgatg aaccccgcat ggctgccgtt
    80881 gatgtaatac ttccggcgga acagcgttgc ggactcgttg agcagggttg acggaatggc
    80941 ggagagatag ccgggcagcc cgtaaatctc ttggttaata tccggctcca taaggtgaaa
    81001 gatgttgccc tgtgtaaatt catagggctg cgtggtcagg tcgtactgca caaaccagta
    81061 ggtgtcgagg tccaagccac ggcgtgtgta cttcgccagt gctggctcca gtgagagaac
    81121 gccgccgagc cggttggtgc gcttttccag ataggcgtta ccgaacacca gataatcttg
    81181 gacgaaacgg gcaaaagcct gctggctgag caggcggtgc gggatgtacg tactgctgag
    81241 aatgtcacgc ttaaccgcta tcggtgagct gtgatgcaca gcggcgcggt aggttcgcgc
    81301 cagcccgtca aagcttactg gcggctcata ccatctgtcc atctgtacgc attccacata
    81361 gtccagcagt tcgcggcggt ccagtaccgg gatcggatcg ccaaagctga acgcttcggc
    81421 gtgagttgta ttcttctgct gttcggcctc ctgcactggc gcggtgctgg tcagggcgtc
    81481 gtgttcactc atcaaaaaat ctccacaata ttgctggtat tggcggcttc gccctgcagc
    81541 ggttcgttaa acagtgcgtg catcgttgcc caggccaaat ctgcgtggct ggcttcttcg
    81601 ctgcggctgg cttcataggt tgggcggttg ccgctggcgg tggtggcccg gcggatagcc
    81661 ataaaggact gcgcaatgtc ggtatgcccg gcgtcaaact ccagacggcg gtggctgata
    81721 atgtcgtacg ccttgagcac cagggcgttt ttgacgttgg ggttgtagac aaactctcgt
    81781 actgctggaa aaaagtcttt tacgttcagg taaacaccgt gaccgacgcc ggtcgagtcg
    81841 atgccgatat aggtcacgtt gtactgctgt gtcagctttt taatggcgtc agcctgggcg
    81901 cggaagtcca tcccacgcca ctgatgacgc tccagaatgc ggaactttcc gcccggtaca
    81961 gtgggcggag caataaccac acaacctgcg ctgtcaccgt tctgcgtacc tttcgccggg
    82021 tcataaccga tccagacttc gcgccagcca aacgggcgca gcgccagcgc ctgaaaatcg
    82081 gtccagactt cccagctgtc caccatgcac gcctgcagtt cgctgagcgg gaatactgac
    82141 gccagatcgt caataaattc gcacatcagc aggttctggt attcgtccgg gctgtactcc
    82201 atgcgcagct ggtcgaggtc gaacaggtta cagccgccgc gcaccgcatc ctccacggtg
    82261 acgatctggc ggtactgtcc gtcagggcag agcaggccgc gtgcaaggtt gctgtgggtc
    82321 aggtcaatat ctaccttgtc cgctttggct cggccccggt taaacagcgc gccggaccag
    82381 aacggatagg cactgtgggt caggctggac ggcgtggaaa agtaggtttg tcgccatttc
    82441 ttgtgaatgg ccataccgga ggcaaccttg cgcagctcct ggaatttcgg tatccagaaa
    82501 tattcatcaa ggtacaggtt gccgtggtag ctctgcgccg tacgggcgtt ggtgccgaga
    82561 aagtacaatg ctgcgccatt gggtagcacc ataggatcgc ctttcagctc cacctcaact
    82621 tcttttgcaa agtcgatgat gtactgctta aagacgtgcg cctgtgcctt actggcagaa
    82681 aggaaaatct ggttgcgtcc ggtcagcagg gcgtcaatca atgcttcacg ggcaaaataa
    82741 aacgtggcgc caatctggcg cgacttgagc agattacgga tgcggtttat ttttcctgct
    82801 tcaaaccagt gacgctgata gtcgaacatt gaggcgtgga agacttcttc cagcttttcg
    82861 atctgttcgt cggagaaaac gttcttttcc ggctgcctgc gcggaccttt gttacggttg
    82921 gctactttcg ggtttaaatc tgcttcgttc ccgccgtcgt taaattttcc gatccgggcg
    82981 tgacgctctg actggcgcgc cagcaggtca atttccttga agtctttccc ttctttctgc
    83041 tccttcatga tgagctggca gtaacgtgcg gcggtggtga gctgcatctg atccagcggc
    83101 ccatagtcgc cccacttgtc gcgttttttc cagctgtgaa cggttgcaac tttttcgccc
    83161 agcatttcag caatgcgggc tacgcggtat ccctgaaagt acagcagcat ggcctgccga
    83221 cggggatcga ggtctgcggg ggtcagtgtc gtgttcatgg cccaaacata cggccttgga
    83281 tggcggcttt ccccggctgc ggtttgtgtg gtttaccgta caaatacagc gcgttgtctc
    83341 actcccccca tcaccgcaaa cataagactc cagtaagtta tttctaacgg agcacggctc
    83401 atgacagtga aagcaaagcg tttccgcatc ggggtggaag gtgccaccac tgacgggcgc
    83461 gagatccagc gtgaatggct ggtacagatg gctgccagct acaacccgac ggtctatacc
    83521 gcgctgatta accttgagca catcaagtct tatctgccgg agagcacttt taaccgctat
    83581 ggcagggtga cggggctggt tgcagaagaa atccaggacg gcccgctggc gggcaagatg
    83641 gcactttatg ccgatatcga acccactgac gccctggtgg aactggtgaa aaaaggccag
    83701 aagcttttca cctccatgga ggtcagcacg aagtttgccg acaccggcaa agcctacctt
    83761 gtggggctgg gtgcgacgga cgatcctgcg agccttggca ccgaaatgct ggctttcagc
    83821 gccagcgccg cacataaccc gctggcaaac cgtaagcaga accctgaaaa cctgttttcg
    83881 gaagcggttg aaacgctgat cgaactggaa gaagcccagg acgaaaagcc gtccctcttt
    83941 gccagcgtca ccgcgctgtt caccaaaaaa gagcagaccg acgatgcgcg tttctccgat
    84001 gtgcataaag ccgtggaact tgtcgccacc gagcagcaga acctgagcga gcgcactgat
    84061 aaatccctgg ctgaaaacgg tgagcgcctt tccgcgctgg agtcctccct gcaggaacag
    84121 cagaccgcct ttgccgagct acagcagcaa ctgagccgcg aagacagccg caaggattac
    84181 cgccagcgcg cgccgggcgg tgacgcaccg gcaggcaccc tgaccaattg ctgatggagc
    84241 ataaaacccg atgaaaaaga aaacccgctt tgcctttaac gcttacctgc agcagctggc
    84301 gcgcctgaat ggtgtggatg ttgaagaact ctccagcaag ttcaccgtgg agccgtccgt
    84361 gcagcagact ctggaagacc acatccagca gtctgctgct ttcctgacgc tgattaacat
    84421 cacgccggtc actgagcagt ccggtcagtt gctggggctg ggcgttggca gcaccattgc
    84481 cggaaccacc gataccacca ccaaagagcg cgagcctacc gatccgacgc tgatggaaga
    84541 cgtggaatac aaatgcgagc agaccaactt tgatacggtg ctgacctacg caaaactgga
    84601 cctgtgggcg aaattccagg acttccaggt gcgtatccgc aacgccatcg tcaagcgtca
    84661 ggcgctggac cgcatcatga tcggctttaa cggcgtgaag cgcgccaaaa cctccaaccg
    84721 tgctgaaaac ccgctgctgc aggacgtcaa taaaggctgg ctgcagaaaa tccgcgaaga
    84781 cgcgccggat cacgtcatgg gcagcaaaac cgcagaagac ggcaccacta ctgcagaacc
    84841 agtaaaagta ggtccgggtg gtaagtatgt aaatcttgac gcggtggtga tggataccgt
    84901 caacgagctg atcgatgtgg agtatcagga tgatgacgag ctggttgttg tctgcggacg
    84961 tgaactgctg tctgacaagt atttcccgct ggtcaacaaa gagcaggaca acagcgagaa
    85021 aatcgccgcc gatctgatca tcagccagaa acgcatgggc ggcctgcagg ctgtgcgcgc
    85081 gcctttcttc ccggcaaatg ccctgctgat cacccgtctg gataacctgt ccatctactg
    85141 gcaggaagac acccgccgcc gttcagttat cgacaacccg aaacgcgacc ggattgaaaa
    85201 ctttgaatcc gtcaacgagg cgtatgtggt cgaggactac cgctgcgcgg cgctggtaga
    85261 aaacatcgaa atcggtgatt tcagcgcgcc tgccgcaccg gaaagtgggg aataacgcat
    85321 gagcctgagt cccgcacggc agcaccgcct gcgcattcag gctgaacagg ccgcccgtga
    85381 gggcggcagt gttcgcc
//
LOCUS       DAGWFR010000002        83763 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.002, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000002 DAGWFR010000000
VERSION     DAGWFR010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 83763)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 83763)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..83763
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.002"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..1392
                     /locus_tag="MOX77_000090"
     CDS             <1..1392
                     /locus_tag="MOX77_000090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001274643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCA3355779.1"
                     /translation="QVIPETEGGWWIREVGLFDETGALIAVGNCPESYKPQLTEGSGR
                     TQTVRMVLITSSTDNITLKIDPAVVLATRKYVDDKALELKVYVDDLMAKHLAAPDPHS
                     QYAQKDSPTLTGIPKVPTPAAGNSTKQIANTEFVASSIAAMVDSAPAALDTLNELAAA
                     LGNDPNFATTMLNALGGKQPLDNTLTNLSGKDVAGLLAYFGLGETINRAADALQKSQN
                     GADIPDKPRFVQNIGLKETLNPTKRVSIGNIGTGVFDGSTPCINIGDSDSGFIGSADG
                     VLDIYCNGAKVGYINGNGLHMLTDIHFDNASMTTNGDIFSSVWGDNWLSIWITNQLNT
                     RGTIDWINSELAIRDNNINTRATIDYVNQTFARKNTGSIQDWGWILDDSTGFIMQWGT
                     LGNSNGTYNFPRAFPVGCFAVFVTNTNAQGTQVDNAFGYPVSNSQFFAATKSSGMANL
                     VNNFPVAWFAIGR"
     gene            1399..1806
                     /locus_tag="MOX77_000091"
     CDS             1399..1806
                     /locus_tag="MOX77_000091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000006337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HCA3355780.1"
                     /translation="MSEYYYSFKEKGFFWQPDTESDNYPDDLIPLTDEYYRELMQGQV
                     DGKYIEHRKGGPVLVEHREYTPEELVAQAEARKAELLAEAESVIAPLARAVKLKIATD
                     EEIKRLEAWELYSVMVNRVDTANPDWPEKPAQI"
     gene            complement(2004..2726)
                     /gene="sopE"
                     /locus_tag="MOX77_000092"
     CDS             complement(2004..2726)
                     /gene="sopE"
                     /locus_tag="MOX77_000092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000161708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-1 type III secretion system guanine
                     nucleotide exchange factor SopE"
                     /protein_id="HCA3355781.1"
                     /translation="MTKITLSPQNFRIQKQETTLLKEKSTEKNSLAKSILAVKNHFIE
                     LRSKLSERFISHKNTESSATHFHRGSASEGRAVLTNKVVKDFMLQTLNDIDIRGSASK
                     DPAYASQTREAILSAVYSKNKDQCCNLLISKGINIAPFLQEIGEAAKNAGLPGTTKND
                     VFTPSGAGANPFITPLISSANSKYPRMFINQHQQASFKIYAEKIIMTEVAPLFNECAM
                     PTPQQFQLILENIANKYIQYTP"
     gene            2940..3158
                     /locus_tag="MOX77_000093"
     CDS             2940..3158
                     /locus_tag="MOX77_000093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015406347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hin recombinase"
                     /protein_id="HCA3355782.1"
                     /translation="MECELIVERTSAGLEVVRSKGRIGGRRPKLTPEQWEQAGRLLAA
                     GETRHRVGLLFDVSISTLYKKFPVNQSR"
     gene            3261..4433
                     /locus_tag="MOX77_000094"
     CDS             3261..4433
                     /locus_tag="MOX77_000094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath protein"
                     /protein_id="HCA3355783.1"
                     /translation="MAQDYHHGVRVVEINEGTRPITTVSTAIVGMVCTGDDADASVFP
                     INKPVLLTDVLTASGKAGESGTLARSLDAIADQAKPVTVVVRVAQGETEAETTSNIIG
                     GVTSDGKKTGMKALLSAQSQLGVKPRILGVPGHDTQAVATELLGVAQSLRGFAYLAAN
                     GCKTVEEAIAYRENFSQREGMLIWPDFINFDTVLKADATAYASARTLGLRAKIDEQIG
                     WHKTLSNVGVNGVTGISADVFWDLQDPATDAGLLNKNDVTTLIRKDGFRFWGSRCLSD
                     DPLFAFENYTRTAQVLADTMAEAHMWAVDGVLNPSLARDIIEGLRAKMRSLVNQGYLI
                     GGDCWLDESVNDKDTLKAGKLTIDYDYTPVPPLENLMLRQRITDRYLVDFASRVAA"
     gene            4443..4958
                     /locus_tag="MOX77_000095"
     CDS             4443..4958
                     /locus_tag="MOX77_000095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major tail tube protein"
                     /protein_id="HCA3355784.1"
                     /translation="MALPRKLKHLNLFNDGNNWQGIVESLTLPKFTRKFEKYRGGGMP
                     GAVDVDMGLDDGALDTEFSIGGTELLLFKQMGKATVDGIQLRFTGSIQRDDTGEVQAV
                     ELVVRGRHKEVDSGEWKTGESSSTKVSSTNSYAKLTINGEVLYEVDLVNMVEIVGGVD
                     LMEEHRNALGL"
     gene            5013..5315
                     /locus_tag="MOX77_000096"
     CDS             5013..5315
                     /locus_tag="MOX77_000096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001528658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly protein"
                     /protein_id="HCA3355785.1"
                     /translation="MSDKLTEKTVKLDTPIMRGKTEITEIVLRKPQSGALRGTRLQAI
                     MDMDVGAMMTVIPRISSPTLTAQEMAELDPADLTAMAVEVVTFLLPKSVLADLPTT"
     gene            5330..5449
                     /locus_tag="MOX77_000097"
     CDS             5330..5449
                     /locus_tag="MOX77_000097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GpE family phage tail protein"
                     /protein_id="HCA3355786.1"
                     /translation="MADIATIFHWSPSITDVMPLTDVLEWRHKAIQRSGASDE"
     gene            5442..8222
                     /locus_tag="MOX77_000098"
     CDS             5442..8222
                     /locus_tag="MOX77_000098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004134619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HCA3355787.1"
                     /translation="MSDNNLRLQVVLGAVDKLTRPFKNAQAGSKELASAIRQTRDQIK
                     KLSDAGGQLKSFDQLTQSVSRTGAELDQARLRAQMMTREMSSLESPTKKQTQALEAQW
                     RAVSRLEQKQQQETRQMAAARAELYRLGLSAGGGARETARIARETERYNRQLAEQERR
                     LREVGERQRKLNAIKAKAEKTRELRNSLAGNGAGAMAAGVTTGMTLLAPVKAYSESEN
                     AANQLAGSMMGPGGKVAPEFEKINRLAVALGDKLPGTTADFQNMMTMLRRQGMSAQVI
                     LGGLGESAAYLGVQLQMAPTAAAEFAAKLQDATQTSEKDMMNLMDVIQKGFYAGVDSG
                     NMLQGFSKISSAMNIINKKGLEAVKTFAPLLVMADQGSMAGESAGNAYRKIFQAALDA
                     DNIKAVNDDLKEKGAGIKFNFSDGKGGFGGLENMYAQLEKLKKLNPETQMATMKDLFG
                     NDAETLQALNIMLSKGIEGYRETAAKLENQASLRERVDASLNTLGNKWEAATGTFTNA
                     MASIGETVAPALKNLADWLGELASRLDGFVKRHPSLTSALFKMAAGFAVAATAVGAIS
                     LALASILGPMAIIRVSAGMLGLKFASVGGLVRAALGGLGKSVLWLGRLMFANPILAVI
                     GLIAAGAIYIWQNWDTLGPKFKAMWDAVCNATGTAWDWIKEKASAAWEGIKSLFFNYT
                     LPGLIAKNWDAIKSGVSEAWANIRQSISDKWNAILADVSALPAKFQDTGSAIIDSILD
                     GINAKWETLKSKLSSVTDYLPDWMTENNKTQDKAQVQVVGGAAAAAVPFAGMYDSGGI
                     IPRGQFGIVGENGPEIVNGPAKVTSRRRTAALASIVAGVMGVAAAPAEAAPLHPYSLP
                     TAAYKQSQPAKSASAPPVMHFETHAPITIYAQPGQSAQDIAREVARQLDERERKTRAK
                     ARSNFSDQGGYE"
     gene            8222..8707
                     /locus_tag="MOX77_000099"
     CDS             8222..8707
                     /locus_tag="MOX77_000099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCA3355788.1"
                     /translation="MMMVLGLYVFMLRTVPYQELQYQRSWRHAANSRVNRRPSTQFLG
                     PDNDPLTLSGVLLPEVTGGRLSLLALEQMAELGKAWPLIEGSGTIYGMFVIESLSQTK
                     TEFFESGMSRRIEFTLTLKRVDESLSDMFGSLSDQLSNLQDSATSAIGNIKNTVGGLL
                     Q"
     gene            8704..9804
                     /locus_tag="MOX77_000100"
     CDS             8704..9804
                     /locus_tag="MOX77_000100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage late control D family protein"
                     /protein_id="HCA3355789.1"
                     /translation="MNFSSDLFGLNSRSPAFSITIEGKDVTTALDARLMSLTLTDNRG
                     FEADQLDLELDDADGQIVLPRRGAVIQLALGWKGQPLFPKGAFTVDEIEHSGAPDRLT
                     IRARSADFRETLNTRREKSWHQTTVGEVVKEIAARHNLKVALGKDLTDKVLDHMDQTN
                     ESDASFLMKLARQYGAIASVKDGNLLFIRQGQGRTASGKPLPVITITRKAGDGHRFTL
                     ADRGAYTGVIASWLHTREPKKKETTQVKRRHKKVATPKEPEAKQGDYLVGTDENVLVL
                     NRTYANRGNAERAAKMQWERLQRGVASFSLQLAEGRADLYTEMPVKVSGFKQPIDDAE
                     WTITTLTHTVSPDNGFTTSLELEVKIDDLEIE"
     gene            9872..10090
                     /locus_tag="MOX77_000101"
     CDS             9872..10090
                     /locus_tag="MOX77_000101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019704608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ogr/Delta-like zinc finger family protein"
                     /protein_id="HCA3355790.1"
                     /translation="MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHET
                     VVRFIVTPALVNNAPPHPTVSGQGHMNF"
     gene            complement(10177..10554)
                     /locus_tag="MOX77_000102"
     CDS             complement(10177..10554)
                     /locus_tag="MOX77_000102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001039750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355791.1"
                     /translation="MNKPLIALLLITSFSASADKIPSSIQNLIAVYDTRTHSLEDGGL
                     TIRYNKRLLLVDAAESMFQGICNDYYMNKWKPGTIKRITLLNVTSDQGFEINAGGDEC
                     RKAGTMKDEQARTYRTSFIKPLQ"
     gene            10688..10774
                     /locus_tag="MOX77_000103"
                     /pseudo
     CDS             10688..10774
                     /locus_tag="MOX77_000103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_490545.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
     gene            10774..12048
                     /locus_tag="MOX77_000104"
     CDS             10774..12048
                     /locus_tag="MOX77_000104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000457546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Y-family DNA polymerase"
                     /protein_id="HCA3355792.1"
                     /translation="MFALADVNSFYASCEKVFRPDLRNTPVVVLSNNDGCVIARSKEA
                     KQLGIKMGVPWFQLKTTEFPVPVVAFSSNYELYASMSNRVMAHLEELAPRVEQYSIDE
                     MFLDVRNIDSCIDFEDFGRQLREHVHSGTGLTIGVGMGPTKTLAKSAQWASKEWRQFE
                     GVLALTSGNPKRTEKLLSLQPVDEIWGVGRRISKKLHTMGITTALQLARANPTFIRKN
                     FSVVLERTVRELNGESCISLEEAPPPKQQIVCSRSFGERVTTYEAMRQAVCQYAERAA
                     EKLRGERQFCRHVAVFVKTSPFAVNEPYYGNVASEKLTTPTQDTRDIIAAAVKALDRI
                     WVKGHRYAKAGCMLNDFTPTGISQLNLFDEVQPHERSEQLMKVLDSINHSGMGKVWFA
                     GRGIAPEWQMKRELLSPAYTTRWAELPVARLR"
     gene            12180..12449
                     /locus_tag="MOX77_000105"
     CDS             12180..12449
                     /locus_tag="MOX77_000105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001222413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355793.1"
                     /translation="MRINVLLLTSLLVAGPALAGEAHVCKSQTVANSAANAELTDNTV
                     FKCGESISGTIPSLAREGWKIVQQTDQADVTDPSKTYAQLIIQKD"
     gene            complement(12549..12875)
                     /locus_tag="MOX77_000106"
     CDS             complement(12549..12875)
                     /locus_tag="MOX77_000106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000911568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3085 domain-containing protein"
                     /protein_id="HCA3355794.1"
                     /translation="MLKFSAKDLKPVLLEARKNHCGVVLVKDHGVYIMSETGELTPRG
                     RKVAYAKGCHPEKDEAWWDTARAEVGGDDFGETINLTKSMINRILNERKPLYITASNE
                     EFKIEC"
     gene            complement(12950..13849)
                     /locus_tag="MOX77_000107"
     CDS             complement(12950..13849)
                     /locus_tag="MOX77_000107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000022217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355795.1"
                     /translation="MSIIDEYISQHFSERLCLDVTEEDITWQLRGSRSDYVNTRIQFD
                     REKLMAVMDVMLSGLDSDETTLARCRQVLTLWIAGLDMLLKEAEQPDWLPRVHPHSSG
                     QCDLLLKGNPAALTEADEETYLRVTGQQDLPAHRRIPQVIFSKTVRYWHRFESWLAQQ
                     LQDITQHCYQKLKCFVANCTTEPRQLREFRGEYGSLRLFVGPQDIDEIDILEFNPEYI
                     VSWVDKVADGLFTPVCFVVNVYYKNGILLESFTWDSEVDNINRMTSSDYGEAMSQAIS
                     WVREQFEQPVIDQPVPQQPRLAA"
     gene            complement(13923..14831)
                     /locus_tag="MOX77_000108"
     CDS             complement(13923..14831)
                     /locus_tag="MOX77_000108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000881184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355796.1"
                     /translation="MLASFYIQRQLSKALGLSVNAEEVFYQVDDRESDYVNTDMVLNR
                     DRLLSVMQFMLDDVALNPELRERCRQAERILTLWIRGLDALATVSEDMSILPRTITEC
                     SGRVDRLLPGDPQALLALPDDAFLRLTAQCHLMSGEQFPREQLAATMPYWTRFMAWIA
                     RELYQVEDRCLVQLGRLYRRLHVEPRKIRCFNLAFGRIELHMSGRDIDECQYLYAYDD
                     ASLEDYLEEIMAGNLTPVRFEVRVIYRNDSELNVFRRDADVIDVEHPHVSDWQNVVSE
                     ALDWLRQERTSLVEIPLTRPALKLAA"
     gene            complement(14903..16852)
                     /locus_tag="MOX77_000109"
     CDS             complement(14903..16852)
                     /locus_tag="MOX77_000109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015606332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1738 domain-containing protein"
                     /protein_id="HCA3355797.1"
                     /translation="MNTSLHPDDISRFISGRLISSLAAGQVPWRGTIPGLPEHALTGV
                     PFTGINVLLLWQAMQQRSLRSGRWLTGDDLRQLGGQVRSGEKPVTLVRYRPSLSLFKV
                     INPEQCDGLPDTLQPGWPLPPRPQPSLNVIRDLLQNSGVPVIHRDNVLPVYRALHDRI
                     ELPPVASYVGEETYWQDILNLLVQATGHPQRLHRFGLTVDTRTDEVHEALVAELGAAF
                     LSAALGLPGAMLSRLDVAPWVTYLQGDPWRLFRAAEAARKAMMWLKERRPSMTTVEMW
                     QKMASLILETHYGFSLDDTTLGCRSVVERHIECGITPLMAINALARIYQWERYDQPQR
                     SLFINEAGPDSEILTLSEIRPELLTCYRVPVPSGIPDRKAEAVQVESLPLLLAPAVSE
                     GKSAANDDGPDDPDGNDNVVALPWAARRGKENPHIHRFVSIFNGIAPHESRWQVFSDF
                     VHMAACSLYNAVHRDPDFEADYMRRVSHYSAEDANNMARLLSEVVMGLEFSPTDFLGR
                     IYMISGLGNFHNAQYFTPYSVSYAMARMTLSDRIPELSSGERDFITVSDPASGAGSMV
                     VALAEAMLEAGFNPQKQMVAYCVDIDPVASMMCYIQLSLMGIPAIVATGNSLTVEIKR
                     EMATPMFVLGRWHHRWQADRTRKAA"
     gene            complement(16941..17399)
                     /locus_tag="MOX77_000110"
     CDS             complement(16941..17399)
                     /locus_tag="MOX77_000110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000115421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355798.1"
                     /translation="MSVMTTNETPASTVAEPEVFRRTRNRFNQWLQAEFDRHYHTMRD
                     GGYRSFLKKNHPTELLRYDEACEALRREEFARFAELQTLGLYLHLQVQQKEAQFRRRR
                     NRLLLGMTLTGVVTSVLLYGHFHPEQFLLIGQELATLPGRILGFVGRLVP"
     gene            complement(17477..17773)
                     /locus_tag="MOX77_000111"
     CDS             complement(17477..17773)
                     /locus_tag="MOX77_000111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000969000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355799.1"
                     /translation="MMDIMALLSSTPPAVAIEEPVWEQLVKYPQAPDCENERLQRLIY
                     HGFQALSQAPSGQGIVEFGYFCLPPDGDLHAPLWQNVCIKREYSDGQVTLTFDR"
     gene            complement(17770..18222)
                     /locus_tag="MOX77_000112"
     CDS             complement(17770..18222)
                     /locus_tag="MOX77_000112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000979718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355800.1"
                     /translation="MMLTTRLFVFLLHHLWRVMRWTGLTVYHGISVLYRRRQARLQAS
                     DWRPRTVYTGRWQLADDGQFCGRAVVLRLRDALKPGVELLYFGEEAAEPYYSERQFVD
                     DRESVMVAEQMLLRFLGSRHRRQNRRNAPVSVLVTDVVTTAPVNDEAA"
     gene            complement(18240..18449)
                     /locus_tag="MOX77_000113"
     CDS             complement(18240..18449)
                     /locus_tag="MOX77_000113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000018146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355801.1"
                     /translation="MSHIHLPSVCEKTGNTLTPEQENRVRHLVHEECYSRDRAALIKL
                     IGLMLLLKLAGTLMLAMLLLVLRLF"
     gene            complement(18820..19200)
                     /locus_tag="MOX77_000114"
     CDS             complement(18820..19200)
                     /locus_tag="MOX77_000114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001103837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355802.1"
                     /translation="MNVYQLKNRTDVLIWLSLIEGDLLSIQASLNAGLYPLYDDRQEE
                     PEFECAVFNCGMAFGEFMERLESEDIDVLTTAGHELTGSIEHMGRMLCEPVWTQAVLL
                     GRNEARADRAICAAEADGWLYDPA"
     gene            complement(19296..19598)
                     /locus_tag="MOX77_000115"
     CDS             complement(19296..19598)
                     /locus_tag="MOX77_000115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001020124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355803.1"
                     /translation="MNIFLTSLVSILRKALPRIRHGKSEWIANHTGYLRFQAEVWLDD
                     NDHFHAVVNKRSGWMNPRYEQVVDCGKFDSFHCAMNTAYSQALELAHLRYAWELTD"
     gene            complement(20322..21242)
                     /locus_tag="MOX77_000116"
     CDS             complement(20322..21242)
                     /locus_tag="MOX77_000116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000907594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase domain-containing protein"
                     /protein_id="HCA3355804.1"
                     /translation="MAGKTARSKVEKFRRDFVTLARDAGRAYATAADSMRIAKYFLNY
                     LRDNGIKLRHTDSIKTRHVTGYLQFRKSQGISVRTIQNERAAIRGVLNKAGRYKLADP
                     NNPLLSNKALGLEKSSRSGTKLPLSPEEFQKAFKEVEKSNRGVAATMLLSYTLGLRTK
                     EAVESCKSVMTWKRALESGEHSVRVIFGTKGGRGRNTLIVDKDALRHAINYAEKVMKE
                     NNGKLIDRPDIRKAIDTYRYHVRRAGLTGEKAPHSMRYHFSQEAREYYEKNGFSGKEI
                     YAQVSMDLGHGDGRGRYVKQVYFRDGTEDE"
     gene            22508..23050
                     /locus_tag="MOX77_000117"
     CDS             22508..23050
                     /locus_tag="MOX77_000117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010989295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1062 domain-containing protein"
                     /protein_id="HCA3355805.1"
                     /translation="MKVTWTVTPVGYQHIAKRCPSCNVKRDFTPSGAFRINSQKKILD
                     VWSIYKCTHCDYTWNIALYSRLPVSKINQELHHRLMTNDESTIRHFAYDTAVLKQNNA
                     KLSGQLDFRIQERCLTSITRQYQICVRIRLTRSFQVSLLSIMKIQLMLSSADIRRRID
                     SGQITGVTAKMLKSRKLRQT"
     gene            complement(23261..23902)
                     /locus_tag="MOX77_000118"
     CDS             complement(23261..23902)
                     /locus_tag="MOX77_000118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB N-terminal domain-containing protein"
                     /protein_id="HCA3355806.1"
                     /translation="MGDIVTREQVASLITRYFSQQLSDDEKVAALNHFRLTLHELSPF
                     AREPVDLVLWVKASEVVANDYNPNVMAAGEKKLLQHSLQEDGFTQPVVVSEEKGQYLV
                     VDGFHRQLLGRRESGAGKRLKGWLPVTCINPERKGKAERIASTIRHNRARGKHQIASM
                     SDIVRDLARLGWADERIGKELGMDRDEVLRLKQISGLTELFEEEDFSPAWTVR"
     gene            complement(23887..25134)
                     /locus_tag="MOX77_000119"
     CDS             complement(23887..25134)
                     /locus_tag="MOX77_000119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001285496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoadenosine phosphosulfate reductase"
                     /protein_id="HCA3355807.1"
                     /translation="MSDNVIMQRNQIQKIRTGEDVLSAVTGRVEWIFDTFSQVCLSFS
                     GGKDSTVLFHIAATIARRKHRRFSVLFIDWEAQYQCTIEHVQKMKDLYSDVTETFFWV
                     ALPLTTVNGVSQFQPEWVCWEPDVEWVRQPPTDAITDTTYFPFYRYAMTFEEFVPAFS
                     TWFTGNQCGVAILTGVRADESLNRFIGLTSQRKLRYADDKPWTTASPEGFYYTMCPLY
                     DWKARDIWIYHARTGAIYNPLYDLMYRAGVPLRNMRVCEPFGPEQRRGLWLYHVLEPE
                     TWARMCARVSGAASGAIYANESGAYFALRKRISRPAHHTWRSYAMFLLDVMPQKTAEH
                     YRNKIAVYLRWYQTHGYPEDIPDEQENDLGSRDIPSWRRICKTLIKNDFWCRTLSFSP
                     NKPRHYERYLERMKQRRKEWGIL"
     gene            25539..25781
                     /locus_tag="MOX77_000120"
     CDS             25539..25781
                     /locus_tag="MOX77_000120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000623988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355808.1"
                     /translation="MISKLPRDKDCNDSDSSSRKSVSEKIIESIAEKQKINQEIMKID
                     LEIELLRTKKGNMTAQDYDSKMRELTNKHSALKRKI"
     gene            26005..26394
                     /locus_tag="MOX77_000121"
     CDS             26005..26394
                     /locus_tag="MOX77_000121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000993573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355809.1"
                     /translation="MNAQARGARAARLYKRAKSKLISLDHFCVQKAREHKLPAWTGHL
                     PVTTLTGILFAAVIFGSLLFVSLGLFIFALILVTSWPGKRTNSADSWSDNSWGSSMRD
                     GSEGFGLYTGPENSHIPTSRIDNEDDL"
     gene            complement(26430..27935)
                     /locus_tag="MOX77_000122"
     CDS             complement(26430..27935)
                     /locus_tag="MOX77_000122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003029772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraG N-terminal
                     domain-containing protein"
                     /protein_id="HCA3355810.1"
                     /translation="MTTSSYLEYILTILGWVVNNGLWDVLTGTGLFALPLGFKIIGIW
                     IKTREEGDDEGNKGILSARRMEHAIYGAFIVIIACCVPTQTVSLTTLTFDTTRAKQCG
                     FWTPVKPGDSGYGSVVSTMSGMTASAPVWWAFMHMISKGVTQAAVASLPCRPDLRQVR
                     FDVQHTQITNPALAQELQDFTSDCYAQAFALWKRQDAGRTTDIDVLRDIEWLGSKIFL
                     KDFYPQLHSKLPRSAFPWSQSRDDGYANTGQGGYPTCSEWWSQNKTGLKSRVLDTVNT
                     TTMTRMAAAFKGMVSKEEYTEALIRRLVSPTSLSVSQNGRTYAGYGGNADFTLDNAVN
                     RMASVLGTSVGALGAFPAFDAMRQALPMVQALLLMAMYVLIPLVLVFGTYEYKTVVTL
                     TFVTFGMHFLTFWWELARWLDSWLLEIMYGSDSHSRWNVAGFQNSADDLIMNFVMGTM
                     FLVLPAVWMGALSWAGVRIGGIVDTNLNKGVQPAGQHGGKVGDKIGSGIAK"
     gene            complement(28268..29698)
                     /locus_tag="MOX77_000123"
     CDS             complement(28268..29698)
                     /locus_tag="MOX77_000123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010989292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrating conjugative element protein"
                     /protein_id="HCA3355811.1"
                     /translation="MRSQSILSVCLMLGIVSSGPLSAALLDAPTLSGDGYGKSVNGAV
                     SDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQLNGVTNGF
                     KDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNCESMANK
                     LADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGKKAGG
                     KGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVKVL
                     GDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPT
                     QANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTG
                     QSEPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVT
                     NPQKESQTNADTRLSELETRKPGDSQ"
     gene            complement(29713..30681)
                     /locus_tag="MOX77_000124"
     CDS             complement(29713..30681)
                     /locus_tag="MOX77_000124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000838927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03756 family integrating conjugative element
                     protein"
                     /protein_id="HCA3355812.1"
                     /translation="MKSLRLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWR
                     ISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVEN
                     AVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPSTSIIGGQIPGYSCNSAAT
                     PLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQD
                     DYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSP
                     TLSMSCSVFPDTGKIAENGNYAWTLWQPYSCCKRRGQTFLYSTDIN"
     gene            complement(30678..31070)
                     /locus_tag="MOX77_000125"
     CDS             complement(30678..31070)
                     /locus_tag="MOX77_000125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000821941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03757 family integrating conjugative element
                     protein"
                     /protein_id="HCA3355813.1"
                     /translation="MKRILSSLILISSFSASAQIVVYTDQGHPPVGVTPAIRVVYLDA
                     SERWLQQQFGELSSDPEQAVRQAHSLLNSPDWKRRQKALIEHYRGMIEAWQLGLLKYP
                     AVVFDNRDVVYGTVDISRAVALRRGENQ"
     gene            complement(31225..31611)
                     /locus_tag="MOX77_000126"
     CDS             complement(31225..31611)
                     /locus_tag="MOX77_000126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000054770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355814.1"
                     /translation="MSLLKHEQWLILGEDESHRIPPDALLGLPPQGKAWIRKEHDEDM
                     SRLTSHIQGALGNTYRGVCHPQRIGHRACLAIHLENLRGKKLDILITVSGKTALPAEE
                     SYVNPRWYIDVADAADALYLALWLIR"
     gene            complement(31766..34601)
                     /locus_tag="MOX77_000127"
                     /pseudo
     CDS             complement(31766..34601)
                     /locus_tag="MOX77_000127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000253395.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="conjugative transfer ATPase"
     gene            complement(34601..35050)
                     /locus_tag="MOX77_000128"
     CDS             complement(34601..35050)
                     /locus_tag="MOX77_000128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000244536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03751 family conjugal transfer lipoprotein"
                     /protein_id="HCA3355815.1"
                     /translation="MVLTDNQKITSRTVKITPVLFFIAGMFSVALGGCSSSKDELLPP
                     GDSSMMELWQGNAPTSHAVVKGRETLRRSLSSQETLASGRIDESYSRTQENELSQIFP
                     RLPNPDMVMYIFPHLANGNTPVPGYSTVFPFYAQTQYALPGERTEAL"
     gene            complement(35037..36515)
                     /locus_tag="MOX77_000129"
     CDS             complement(35037..36515)
                     /locus_tag="MOX77_000129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015606328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03752 family integrating conjugative element
                     protein"
                     /protein_id="HCA3355816.1"
                     /translation="MQIKANGLMKVLLPVLIVVVCFIGVKACGLKDTTEPEPAKTTNA
                     LTELSQDDLKALGIEGDTSADTLRTLIGALRDVRARQAVLDEQNKALISENNKLKGEN
                     SSVGLQISNAVNAAKQETNEALEKQKTFLLEKLNDLTGTLKSQGQNTDMVSTGSSSGT
                     DFPVGLGLDPENASSATQGEVIWISPQDAKKTEGQSQSDNDKFTFPTSFLDDNPVSRQ
                     RAEYDRVVKNKQELDGNGAESDTRPVYTLPENSTLVGSKAMTALIGRIPINDKVTDPY
                     PFKVLIGKDNLTANGIELPDVEGAIVSGTATGDMVLSCVRGTIHSITFVFSDGRIRTL
                     PRPVANTQGNNNDNAGDRGSIGWISDNNGIPCISGERKSNASTYLPTVALLGMGSSAG
                     DALTQNQYTTQNNVNGGVTSALTGNAGQAVLGQTLGGGFKEVTDWVKQRYGQTFDAVY
                     VPPGANVAIHITRQLAVDYEDHGRKVRYDFSLPGTGGHYGLD"
     gene            complement(36505..37404)
                     /locus_tag="MOX77_000130"
     CDS             complement(36505..37404)
                     /locus_tag="MOX77_000130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001240640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03749 family integrating conjugative element
                     protein"
                     /protein_id="HCA3355817.1"
                     /translation="MAMFKVLNFKCKWWPIILLLWFSSAQAVELMKWERIPLLIPLSV
                     NHERIVFVDRNVRVGFPAMLKGKLRVQSSGGTVYLQASEPFEQTRLQLQDVESGEIIL
                     LDIAAKNDNKALEPVRLVYSGEVLSVSEKGMETGSSLPVASLDTEDKNQTVRKTPVYS
                     APLPVVLTRYAAQSLYAPLRTVEAVPGIHPVNLRLPSRLTTLYPSENVVVSPIGAWGI
                     QELNVVALKIRNRSSSKVILDARTLSGSFVSATFQHRWLGAAGTPEDTTTLYLVIRGR
                     PENAFIAEPAVLPAVKKGEQHAN"
     gene            complement(37404..38057)
                     /locus_tag="MOX77_000131"
     CDS             complement(37404..38057)
                     /locus_tag="MOX77_000131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016808259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03746 family integrating conjugative element
                     protein"
                     /protein_id="HCA3355818.1"
                     /translation="MSRFRHALKDRDQHILTLRLACGVLLLLLILVITGWMRAPSDLT
                     IHNPPDLRSGSTRKWWEVPPSTVYSFAFYIFQQINAWPKDGEKDYPMKIAQLSPYLTP
                     SCQDFLNKDAELRSQKGELLDRVRVVYEIPKRGYKPESVIIESDDSWEVSLDLVVDEY
                     YHTEPVKRALARYPLHIVRWEGDPERNAFGLALDCYKGVPQRLEAAVVPEPEKKGMF"
     gene            complement(38054..38428)
                     /locus_tag="MOX77_000132"
     CDS             complement(38054..38428)
                     /locus_tag="MOX77_000132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000848326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03750 family conjugal transfer protein"
                     /protein_id="HCA3355819.1"
                     /translation="MKTIEFLPDRLNAETVVFRGFTTPELGYAALIGAVSGLILSLIM
                     MLVTGIGWPIIPTCTLITPLIFIFIGGRFLVRFKRNKPNFYLYLRIQKILSHIGIGSK
                     VLVRHDRRWSLRRSKPVRKGGI"
     gene            complement(38438..38800)
                     /locus_tag="MOX77_000133"
     CDS             complement(38438..38800)
                     /locus_tag="MOX77_000133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000949576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03745 family integrating conjugative element
                     membrane protein"
                     /protein_id="HCA3355820.1"
                     /translation="MLSKSKHGLRVPLPCLLILLLLVASFSSHAGLPTVNIPGGGGGG
                     DMMQTIKLLFSGFLVLMGLIICAVGFYMVSGAILATFSEIRSGKAEWGKFVAIVVVGI
                     AILVVIVWLCTEAAKILN"
     gene            complement(38830..39069)
                     /locus_tag="MOX77_000134"
     CDS             complement(38830..39069)
                     /locus_tag="MOX77_000134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001251281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03758 family integrating conjugative element
                     protein"
                     /protein_id="HCA3355821.1"
                     /translation="MAMNSEQANAFKAGSGIDPTVLNKFVLGFVLSVLFLWFAWSVLV
                     VFRGWRAGKVTEQNALHFFISTAILVVFSVWMFAS"
     gene            complement(39069..39323)
                     /locus_tag="MOX77_000135"
     CDS             complement(39069..39323)
                     /locus_tag="MOX77_000135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015701164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355822.1"
                     /translation="MVSAAEKDELALALRQLDQVQSALERAKIVAVQDNSDGRFFFDY
                     ERATRDLKTMKQGIETYLEPSRAQPRDKGSLVGQYRKEQP"
     gene            complement(39560..40318)
                     /locus_tag="MOX77_000136"
     CDS             complement(39560..40318)
                     /locus_tag="MOX77_000136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010989289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03747 family integrating conjugative element
                     membrane protein"
                     /protein_id="HCA3355823.1"
                     /translation="MSTEKNSSQSSPPPRKPPGLLTLVLWIWPVRLLAFLLVSWMAGV
                     FIEWAGMFFFWSDQGALHSQSVMNKELGYLSADFTQSLIFSSPSVTTMGWISSAYQWA
                     FVDSGLLTWIQKEQRETLSSSDSVVFFLGQVQAWLLSVLSDYLLALVYVTVVFAVRVL
                     ILVLSIPLFVLVIIVAVIDGLCRRDLRRYGAGYESSFLYHHAKRFVKPAVYLPCLLYL
                     SWPASIYPNLLLLPGALLLGLAVTVVTSTFKKYL"
     gene            complement(40315..42405)
                     /gene="traD"
                     /locus_tag="MOX77_000137"
     CDS             complement(40315..42405)
                     /gene="traD"
                     /locus_tag="MOX77_000137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000071290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV conjugative transfer system coupling
                     protein TraD"
                     /protein_id="HCA3355824.1"
                     /translation="MSNRYVMEALLRPAVELYSAAAGGAATFVLVVAPWSMALAPQVS
                     YVTAAGFAIFTTIRTRQGLRILRYRRNIRRLPRYQMSSESIPVSRHFLFLGKGFMWEQ
                     KHTQRLLETKRPEVAPFLKPSVFYSLARQFERRYEYTFPGLCSLTRRDSFFNPVRPLP
                     PVGGNSAIHGVEMEEDNVLMSLTERVGHLLVLGTTRVGKTRLAELLITQDIRRGNVTI
                     VFDPKGDADLLKRMWAETRRAGRSDEFYIFHLGWPDISARYNAVGRFGRVSEVASRVA
                     GQLGGEGNNAAFKEFAWRFVNIIARALVVLGLRPDYSLILRYVTNIAELYETYAEKLL
                     TQQAPELWLMVQNQMGILTEDDLPRTMQGQVNAIRVMAIEVALSSEQGKKIYDPVLDG
                     LRSAVRYDRTYFDKIVASLLPLLEKLTTGKTAALLSPDYSDMNDPRPLIDWQEIIRKG
                     GVVYVGLDALSDSEVASAVGNSMFADLVSTAGYIYKFGLSDDMPEGSSQRLPISLHCD
                     EFNELMGEEFIPMINKGGGAGIEVTAYTQTWSDIEAKIGNAAKAAQVTGNFNNMIMLR
                     VREKTTAELLTTQLPEVEIYTKTLVSGVTDISNPDQGSDFTSNVQDRVSSTRVPLLSP
                     AEVMNLPKGQAFALLEGGRLWKIRMPLPASVDDEMMPVNLQSIVTTMRKHYRTGDTWW
                     SGSVLPGDNLVDAL"
     gene            complement(42425..42994)
                     /locus_tag="MOX77_000138"
     CDS             complement(42425..42994)
                     /locus_tag="MOX77_000138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000626967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease"
                     /protein_id="HCA3355825.1"
                     /translation="MITAILLLLFCLLIPAIWRKKMPSARDRRHRRYRQNAERVLCRL
                     TALDSDGARLKYLRKINPYVFEELLLLAFERQGLLVVRNQTYSSDGGLDGQVFIDGKR
                     WLIQAKRYRRTISPQHIREFGELITREQCCGFFIHTGRTGSKSVNYLQCWRTIQLISG
                     QRLLDLLAGRQCWYHRPVTKSVAGQPVVT"
     gene            complement(43004..43504)
                     /locus_tag="MOX77_000139"
     CDS             complement(43004..43504)
                     /locus_tag="MOX77_000139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000253629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrating conjugative element protein"
                     /protein_id="HCA3355826.1"
                     /translation="MVSILLTTSSMAALNVIADLGGEPTAPLFDAINNKNNEFTPPRS
                     LNATGASVTAAPADVSDMLPVTTPEMRAGKVEARELNLNGMTPVFLVGDDSLSREWLT
                     MRRDELKRLHATGLVVNVSDKDALSELQQIIPDVILLPASASEIARRLHLNHYPVLIT
                     ATGLAQ"
     gene            complement(43540..44226)
                     /locus_tag="MOX77_000140"
     CDS             complement(43540..44226)
                     /locus_tag="MOX77_000140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000013624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HCA3355827.1"
                     /translation="MANRSILTAARYSVPVLILLIGGVGSAAAVEKGRGLQTIPPGYH
                     LVATEVGVPAEALYSVSLAETSRKLPHGERPWPWTLNVAGKGYRYNSRQEAYDAMLSF
                     MRRYPLKRIDVGIAQVNLGWNGTYFSSYYEALDPYTNLRVAARILKSCYDNNPGSWIQ
                     AAGCYHHPAGGKPARIYKSIVKRKLATLDLNAPVTYSELQIAQISPSQRHFSHYNREL
                     QWVEPRESRQ"
     gene            complement(44205..44945)
                     /locus_tag="MOX77_000141"
     CDS             complement(44205..44945)
                     /locus_tag="MOX77_000141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001768408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03759 family integrating conjugative element
                     protein"
                     /protein_id="HCA3355828.1"
                     /translation="MKPMKSTLNCLRQWTASVMLAVIVSLPALASVSTGRSVSAPQQQ
                     NTTTEGRTQTSGTAWGLSEKEWQQYQQVLKGPRAFQSPGIDPLMALGLEAGSASERRR
                     FAEMWVKEEYARGEKELAFQREVDAAWKRLYPNTLSVNMGNASGIAHDTQGRLALFVK
                     RNCVPCDARVSAVLADNRPVDIYLVDSGGSDDTIRQWALAHHIPVDKVRSRQITLNHD
                     NGNWLKYGQGYMPVMLQQGVSGWQIAAF"
     gene            complement(44964..45878)
                     /locus_tag="MOX77_000142"
     CDS             complement(44964..45878)
                     /locus_tag="MOX77_000142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000214158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355829.1"
                     /translation="MTTTTASSVDIPSDNDLPLSAHLTEPAEPAIDTSDITVTPDTSA
                     QSAAYRLGGKRSRLWHPSSDRRSLIFKVSSVLVYCLLLGAVLFLWLTVRQQQIQLTTL
                     DAAFRSGQLQTLPDRMQAIEDRQQQFVPKLQGEKWQLRLSEQELRLTAFEQQLSSLVT
                     EVKETQAATARAVAREDETGMKLDAVHKALTEQTSRIDTLASWKDTWSKRTVATATKA
                     TPSPGGGQSAAKKSSKPRVIKPPFTLVSIERRGGQAYAVILPAGNSGWTQLRMVSPGE
                     SLSGWVLVNISGNQAEFQVNGQVQRLTL"
     gene            complement(45835..46197)
                     /locus_tag="MOX77_000143"
     CDS             complement(45835..46197)
                     /locus_tag="MOX77_000143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001149494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355830.1"
                     /translation="MQAWLNELAGAYRRVEVMTYREIITALPALPADGEWWRRSLRGV
                     GRQRAPSTLYLHIAHIFKRLPVCVPDANLDPLFSLLSFDLSVVSAELFLHSHGENRFP
                     EDLYHDDNDGIFCRYSVR"
     gene            complement(46385..47260)
                     /locus_tag="MOX77_000144"
     CDS             complement(46385..47260)
                     /locus_tag="MOX77_000144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000994659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355831.1"
                     /translation="MNATYNALIALMRSGEIPLETGASVSAPSAQFSVRIRPETRVFL
                     DRCAEHLGISRAAMFGMCIDGIVAEARESIADRTSTLYERFCLLLDAHGLNVIEQAQL
                     LASWGIRASVLASQDRTLDLLNKPLLQQLSTWFDVDVNWLLGNSSYPVDMADGQRDWA
                     VQTPSLLCRLQSIQSVDPVELIFFWQQGRKPQSVGLCLRYRPLISGEPIGLLRVYQAL
                     DWQDEQVQQAYNQLRRITSITLGGYTKDKVEKYPPIRLRYFTFSARQMQALDNGAVIP
                     AMIFDKPKGEFPSIS"
     gene            complement(47472..47939)
                     /locus_tag="MOX77_000145"
     CDS             complement(47472..47939)
                     /locus_tag="MOX77_000145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000455463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355832.1"
                     /translation="MEYALFVMFCLALYCPCFTLIALFTPWKGFAVFSVTYRRRQYWA
                     VHLALLDRVGAMNRRQARRYHQAFVQALETALVARPVRPVFFRSHLMRPAQVALTCQV
                     LSHRTGYRCRIAPITLPRWERVAIFAQMLLQEWRLIQLPSEEGIMVVIHRLAE"
     gene            complement(48036..49187)
                     /locus_tag="MOX77_000146"
     CDS             complement(48036..49187)
                     /locus_tag="MOX77_000146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000089603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HCA3355833.1"
                     /translation="MSRPQRIKKMSLSKALDKYYATVSVHKRGHQQEFYRVRVIQRHP
                     LAEKMMDEITTVDIASYRDDRLSQVNTRTGRCISGNTVRLELALLSSLYNLASVEWGT
                     CRTNPVEMVRKPKISGGRDRRLTSQEERRLSRYFQEQNPALHAIFHLAIETAMRQGEI
                     LSLRWEHIDLQHGVAHLPMTKNGSSRDVPLSRKARHLLQGMTVALSGNVFHYSSSGFK
                     SAWRVALQRLNIVDLHFHDLRHEAISRLFELGTLNVMEVAAISGHRSLNMLKRYTHLR
                     AYQLVSKLDARRRQTQKIAPYFVPYPACIESVNEGSDGCCGFRVHLPDFDNLSVSAAS
                     RESALEAAGVLLLRTLAKAAQRGERVPRPGDLPEGKHERVMIHPLLSAA"
     gene            complement(49535..50842)
                     /gene="pilV"
                     /locus_tag="MOX77_000147"
     CDS             complement(49535..50842)
                     /gene="pilV"
                     /locus_tag="MOX77_000147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000744276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shufflon system plasmid conjugative transfer
                     pilus tip adhesin PilV"
                     /protein_id="HCA3355834.1"
                     /translation="MKKQKHDGGFVAMSVGAGLLIVLVMASLAARYMGDYLKSREWQV
                     VAMQTNRFTQAVSSYVGKFYPTVLASATTTTPAVVTTQMLKNTGLLPASFSETNSYGQ
                     QYQAMIVRNQQNQELLQGMVVSRGGHAMPFTALSQISKDITAGFGGYVEDGQTAVGAM
                     RSWRIPLSSYGTSTGRGHLAVMLSTDDLSGAREDGDRLYRFQVNGRPDLNKMHTAIDM
                     GGNNLNSVGTVTASNVAGQNGNFGVSLVSNGPITAGGDIRSTGGWIVTRSGKGWMDET
                     HGGGLYMSDNDWLRILNNKGFYTGGEIRGGKIRSDGDVSAGGILTLDKINVASTACPV
                     NGAISRDTAGATLSCQSGIWSSYRLNFNIQTFNVGKNVRNQYIGVHAYCAWTYLNGSP
                     LGGFQEIHSNGSNGWYISNYRWGNYESGGTISVTCLNLPGAGL"
     gene            complement(50839..51501)
                     /locus_tag="MOX77_000148"
     CDS             complement(50839..51501)
                     /locus_tag="MOX77_000148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000218700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HCA3355835.1"
                     /translation="MTVSLIGTIFPPVYAIPAFIGCAIFGAVLLRPVRLYLAAAEVDI
                     SRHCAVVVGIWLFAVTGLLILMAPQVWMTRIGMLFMCSFLLQLGVMDATSGWLPRPFT
                     AACLCSGLLFCLAFHREPELRFMETAAMAVVMGSICHGVNRRRPQLGVGDVWLVCALV
                     GWMGVTDALQAAFFGLSGFMLWQWIVHRDFLRCGVLGPWLCAGCIPVIVDRLYQPEWI
                     LR"
     gene            complement(51498..51974)
                     /locus_tag="MOX77_000149"
     CDS             complement(51498..51974)
                     /locus_tag="MOX77_000149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000334696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HCA3355836.1"
                     /translation="MCGYFSRLALFMTLCSVPLWVQAFCFDAAAAKYHVSPLLIKSMA
                     IGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIPRLVSMGVIRDKNDLLNKPCL
                     NVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRERYANRIWKIYQRQTGAQ"
     gene            complement(51984..52577)
                     /locus_tag="MOX77_000150"
     CDS             complement(51984..52577)
                     /locus_tag="MOX77_000150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000665947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilX"
                     /protein_id="HCA3355837.1"
                     /translation="MNEVSTLNPCNRPDRGMSADAGATALFILVIIGVIAAAVWSMWG
                     KKDAGTELTNYQTLATNTIGMMKGVDGYAFTSGAKMTDTLIQAGAAKGMTVSGDPASG
                     SATLWNSWGGQIVVAPDTAGGTGFNNGFTITTNKVPQSACVSISTGMSRSGGTSGIKI
                     NGNNHTDAKVTAEIASSECTADNGRTGTNTLVFNYNG"
     gene            complement(52619..53704)
                     /locus_tag="MOX77_000151"
     CDS             complement(52619..53704)
                     /locus_tag="MOX77_000151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000074784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HCA3355838.1"
                     /translation="MSPLYRLRRALARRFFTSGYRLRFYRMLSLQMRNGVKLLEALEQ
                     ISNMYTDFGQRTHGFGFLVDDCRAALTDNSGDNSLEHALANWVPAEEAALISAGMFSG
                     RLPEALAEAEILIDCRRRIRQAIMRMAVYPLGCIAMLGGTLGVIQTQLIPTLAGMSDP
                     QTWTGVLGSLNGLLIFFTEHGVVMGAGLALLVAWTRWSLSNWIRPDRLRRLADRHVPW
                     AVYSDIQGAIFLINMGALLCAGVRTLTALQVIHRFASPWLVVRLNAVMEEVEEGASFG
                     MALRECGYAFPSKEAVNYLSMVSGDGAAQMIARFGQEWLEETVKRVNRRGIAVMLFSM
                     VMLFALIGVVVVAVIEATSMTESMGQY"
     gene            complement(53701..55416)
                     /gene="tadA"
                     /locus_tag="MOX77_000152"
     CDS             complement(53701..55416)
                     /gene="tadA"
                     /locus_tag="MOX77_000152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015606324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp pilus assembly complex ATPase component
                     TadA"
                     /protein_id="HCA3355839.1"
                     /translation="MSEHNDAVLLYHNPDTTILELLVDSQRRTDVAVQQKVMSLMEEN
                     PGVTMRLVTRSELLRYSEMARQQSEKGEKGLRLEDIKKEVSSRQGDVLNYFMVAKDIG
                     ASDIHGTTRPGLTRIEMRVHGELETVSELAEEDGKAQAATIILSMCDVTEPQFYAGRK
                     QDGRVAAKFLRKVGLFGARYSHTPTADGLHFVMRVIPDDGDVVPTLEKLGFLPKQIRL
                     IKRTLRLPEGMIILSGPTGAGKSTTLRACSDLYLKRTRYKKRLLTVEDPPEGRIVGAI
                     QTPIICDKADEAEVRLAWQRVLTSALRLDPDAILPGELRDLISILAGIFAAQTGHLVL
                     STLHSNSAFSIPERMITMGANAGLVADAQLLVGLISQRLVQVLCPECRIPWSVKKEHL
                     TTEEREYLEKYCSVEGVCQPENLHFRNEEGCPTCRKAVIIGGKQVATVGKGVAGRSVV
                     AEVVRTDSTLFRLLLQQGKEAAKAYWIREMGGITRRIHLLHKLNDGLVDPLDADLIIP
                     LDEDEVMQVVSDQVASSSDIDTSLIERLAMVIAASVREGMKQGVEEAIKEGVAAGMAA
                     LKEVA"
     gene            complement(55426..56013)
                     /gene="pilP"
                     /locus_tag="MOX77_000153"
     CDS             complement(55426..56013)
                     /gene="pilP"
                     /locus_tag="MOX77_000153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000928959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus biogenesis protein PilP"
                     /protein_id="HCA3355840.1"
                     /translation="MLMPKNSVFISGVLLMAFSAGAFSQPTLAVPPSAEVISAMPASE
                     PATEAAASISSADLSDTVPIFPGNSVTAGQLEALQGKNLLLEAKVQAARLLKELTSAQ
                     TPGDVGNVPTTSPFVMGMPAEMNATPVHTPPATGRITVLEVSGRGNALQATLSFPDGR
                     QSLVQTGSVIPGTSLKVKAITLSSVTLSDGQQLTF"
     gene            complement(55994..57280)
                     /gene="pilO2"
                     /locus_tag="MOX77_000154"
     CDS             complement(55994..57280)
                     /gene="pilO2"
                     /locus_tag="MOX77_000154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000763621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 4b pilus protein PilO2"
                     /protein_id="HCA3355841.1"
                     /translation="MADIPLSGKPRTQVLRWQRQNWVAGLRWEEKQKSVRRAPVQRRG
                     VLNVVLTVKQGKSRLTALGQIEAGWRHQKLYSLAALFSQQCTPNGYGVYQLDDGRQVF
                     LATVKGMPSPMADVIGTPDQIIRARELFLSFNPAPEDGWTIPSSPEFPLSWNTLVGQV
                     SSAQLRFARVAGVSNPLRPYGAGVLSVAALLGGAVWWSRLPEPPVAPVVQELPAPVQD
                     VFKKTPEPVYLPHPWADMPVARHFLNRCQRWRAAVPVSLDRWRLERIRCSAEGLETVY
                     QRQPGGTAAGFAERVKQVFKRTPVFNLVSGGNEGVVFIPWAKFTLQDETAPDAGTQLM
                     QAVSWFQSRQVSFSLSEVKTPPAMPGDGAGNDAPQPIQDWHEYTFSITDKHMPEWILQ
                     GLDMQGVRLSSVGYTLSPQGQFTYQIEGHLYAYAKK"
     gene            complement(57282..58578)
                     /locus_tag="MOX77_000155"
                     /pseudo
     CDS             complement(57282..58578)
                     /locus_tag="MOX77_000155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001324592.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PilN family type IVB pilus formation outer
                     membrane protein"
     gene            complement(58992..59411)
                     /gene="pilM"
                     /locus_tag="MOX77_000156"
     CDS             complement(58992..59411)
                     /gene="pilM"
                     /locus_tag="MOX77_000156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000539682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus biogenesis protein PilM"
                     /protein_id="HCA3355842.1"
                     /translation="MGWFIVALGTVFLLVVGHVQTTQRSEVVKAQQSGSSYLLARQML
                     LLAAGINDWRYRHTLTDGTVALSELALPVAPDSRIRHVIVANRLWVWMPEVPGLVDAL
                     REQSGGSALTGTVTQGQLVWLSGIGNGPFSARVVPDD"
     gene            complement(59414..60658)
                     /locus_tag="MOX77_000157"
     CDS             complement(59414..60658)
                     /locus_tag="MOX77_000157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001095932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TcpQ domain-containing protein"
                     /protein_id="HCA3355843.1"
                     /translation="MNTQALFCLSLPLVIAGCAQQTSTQTARDSAFAQSQQPSVFSDI
                     YQRSPEVTRSGRYTLVSIKSADAQREPLNQLIDITMPGQLVNSVGDGFRYLLFQSGYS
                     LCGHYGADFSELLNRPLPAVQRKIGPMRLSEALQVVAGPAWRMSVDEVNREVCFVLRD
                     AYRVQAKTKALTSVTPAVTGAARTSSPETTRNPYTGVLPGNKAEPVIAGQHLAAKKGT
                     ELKPVSQSLPVPALRPGGTPVTSGVSSAPPVKQVSSPAPRNPFTGKNLTGTTLSASHS
                     PAPVGEKAQAKTPSPSTVKAVNPATATVLATTTKPLTGTPVAAVASGPEWKAVVGSTL
                     KESLTDWAGRADCPGGGHWVVIWQTPTDYRIDAPLVFKGNFETALVQVFDLYKKADKP
                     LFAEASRLQCLVSVADKPADRS"
     gene            complement(60823..61773)
                     /locus_tag="MOX77_000158"
                     /pseudo
     CDS             complement(60823..61773)
                     /locus_tag="MOX77_000158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000368221.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Rpn family recombination-promoting
                     nuclease/putative transposase"
     gene            complement(61839..62375)
                     /locus_tag="MOX77_000159"
     CDS             complement(61839..62375)
                     /locus_tag="MOX77_000159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000157068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HCA3355844.1"
                     /translation="MASKGVNKVILVGNLGQDPEVRYMPNGGAVVNLSLATSDTWTDK
                     QTGDKKERTEWHRVVLYGKLAEIASEYLRKGSQVYIEGALRTRKWTDQSGVEKYTTEV
                     VVSQSGTMQMLGGRNSAGSGQQQGGWGQPQQPAAPSHSGMPPQQHPANEPPMDFDDDI
                     PFAPFGHSVARHALYVLS"
     gene            complement(62388..62606)
                     /locus_tag="MOX77_000160"
     CDS             complement(62388..62606)
                     /locus_tag="MOX77_000160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000958195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355845.1"
                     /translation="MLTSPSSSTGLLAAKFAGLSLPLQVLRSGAGYYIGTQNEEGPVS
                     RESVEYFSTQSQAEHALKQGTWSQREQA"
     gene            complement(62687..63136)
                     /locus_tag="MOX77_000161"
     CDS             complement(62687..63136)
                     /locus_tag="MOX77_000161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000032519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3577 domain-containing protein"
                     /protein_id="HCA3355846.1"
                     /translation="MSKETNYFNLNINGLGYITNVRQVVNGNSKFTCCTLNALSGPTD
                     NADYTRFDVTVAGKDATSLINRCQKSCDEDKKVMIGFVLSGIKSDIFTLAKGDHAGEN
                     RVSLKTRLIRVDWIKIDGAIVYKAEKPDSTPPAQSQPAQKQYAEDSF"
     gene            complement(63804..65798)
                     /gene="topB"
                     /locus_tag="MOX77_000162"
     CDS             complement(63804..65798)
                     /gene="topB"
                     /locus_tag="MOX77_000162"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001241569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase III"
                     /protein_id="HCA3355847.1"
                     /translation="MRLVLCEKPSQGRDIAKFLGATQRGEGFLNGPGVTVTWARGHLL
                     ETAEPEVYGEQYGKPWRTDVLPLLPQQWKLVVKADAKAQFAVINRLLKQVDEVVIATD
                     ADREGEVIARELLDYCKFQGRVFRLWMSALDDASIRSALADLWPSSRTESLYYAGVGR
                     SRADWLIGMNLTRLFTLLGREAGIGNVLSVGRVQTPTLAIVVKRDREIDNFVSKPYFE
                     VIATMAVNGVLFPSKWVPAAQYCDEEKRCIQSGVAAQVVQLCRQTPTAAIINCQIERK
                     KQSAPLAFSLSTLQQACSRHWGMPAQTVLDIAQKLYETHKLTTYPRTDCGYLPLSMRE
                     EIPQVLSAVVGTDPALQPVVASLDTQFVSRIWNDKKITAHHGIIPTKHTGDLSKLSDA
                     ERNVYQLVRLHYLAQFLPQMEIDVTEATFNIGGQLFRTRGNVLVKPGWKSLFGKMSED
                     DEDNTGETTLPAMQAGQVCQVQGAEQKVLQTKPPAPYNDGTLIAAMTNAAAFVTDAAL
                     KKVLKENAGIGTEATRAGIIDTLLKRGFLVREKKTLKSTPLGRNLVDVLPGTLTNPGL
                     TALWEQMLDEVAAGRVSLDDFMAKQSQWVSQLVAQGRSQPLTMQAPPSPPCPVCGGKT
                     LQRNGKSGLFWGCLKYPECKGIVNNGNKGPRGRRRKPSPA"
     gene            complement(65909..66685)
                     /locus_tag="MOX77_000163"
     CDS             complement(65909..66685)
                     /locus_tag="MOX77_000163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001290445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03761 family integrating conjugative element
                     protein"
                     /protein_id="HCA3355848.1"
                     /translation="MSEKEQVSVSRKAGALRSALNIALNTDYAINLWQGRPPEEEGEK
                     EGKKKERRQSLIFSMPAFIQKAGRINADSFNDNPYADQKMLELETLLQSASVKMNEEL
                     VALKKSMSMLPPQATISEVNCASPLNIGVFSRTPLGYRCVWLLVGFDQLAMQAFQAAH
                     YGFISRQELHRSLRRGGHLIRQIYGAAQKYRFFQVNRRDFALQNAQYHEAIRNAGEID
                     EAVLLGQKRSSFSPPVSKESIELLLAANAKADKADIVQLL"
     gene            complement(67274..68584)
                     /locus_tag="MOX77_000164"
     CDS             complement(67274..68584)
                     /locus_tag="MOX77_000164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001194352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HCA3355849.1"
                     /translation="MQTPAQVMEEPGSSVHRLPADDIIDYTLSKMQARLDGTPGSSGQ
                     ERNGLLFTGNIHDAYPRALILDMRLSPLDKMCWIMIRQYALQNDGAIFPSYDELQKLL
                     SSPGSGQASRDTVSRALTMLRLTGWLSLCKRVRDTGGRVRGNIYAQHDEPVSAKDAEM
                     FDPGWLDMVGKACQHKYREVSDTAFHVLNGILDDPMMRHRHSRMTEIAERLTRPSKVG
                     DVARTHQNPGTGLSLNSIKNEHKSLSPVNRPSSERGEKSPSPDSRLSLKSDSYDRVRQ
                     PDCNNVRSFTQSVIKKTYVSPQSGKNAVAGIPEGFVWPDGLQSILPESEQPMLAQQLN
                     QLAQKSPVQAEQIALSVVNGWHQKRISNPVGYLLTTLRQARAGLYRLEPAVTQPVKSR
                     SVVPAEPSAAGKIPTCSAEADVPAGQEVVKAMVEQIRQRMNSSQ"
     gene            complement(68614..68862)
                     /locus_tag="MOX77_000165"
     CDS             complement(68614..68862)
                     /locus_tag="MOX77_000165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000377625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355850.1"
                     /translation="MDSLAPSFQFYRTDPRNVSKAVTSKARTLLSLYQQGKRVYSQIG
                     QTGYLKIDLGLRWRLLSKDAGKSWLFMSHQTYNRELKR"
     gene            complement(68862..69419)
                     /locus_tag="MOX77_000166"
     CDS             complement(68862..69419)
                     /locus_tag="MOX77_000166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000144323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2857 domain-containing protein"
                     /protein_id="HCA3355851.1"
                     /translation="MTFSLAQGANSLLFNLVMELRGGNIRRCEALGLKPEEMRLLRSL
                     TMEELHYLSGSPVSVLNVAIHHENLKRMLDQANREQKRSERIDRAIALGASIEMMGIF
                     FGLNASDVSSKRRLEGIQTRQGRCQSPDEECEAKIWRLWHEANISDIESLNSLETMML
                     IAEEADVSLTVIWGLIKNWCTGEVA"
     gene            complement(69504..70226)
                     /locus_tag="MOX77_000167"
     CDS             complement(69504..70226)
                     /locus_tag="MOX77_000167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001275616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2786 domain-containing protein"
                     /protein_id="HCA3355852.1"
                     /translation="MSANEKVLSRIKKLMVLAEKTGNPYEASVALRQAQALMMKYDVT
                     PASVVPGEITSETCRNIPSNALSVPGWLNALVTVVCMTAGCRSYYGWYQNSDHKKRRS
                     VTFYGLGERPAVAGYLFGVVSRQLKRDAEHYLHTACAHPLLKLSTIRRRMDEYRLYWV
                     AGVWTVLESFEPETSEKVLLDRWLTQQQRNLTPAKVRQPEGCRNAKKVRQAAWTAGRQ
                     AEIYPAMDYRSEEHSLQEVSNG"
     gene            complement(70213..70473)
                     /locus_tag="MOX77_000168"
     CDS             complement(70213..70473)
                     /locus_tag="MOX77_000168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000838568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355853.1"
                     /translation="MKSLKKPRSHYQWVGATVVTTQELSSGLAVIPVGSRGVVNAAKR
                     GLSVIFDACPCCGVQLRLTRIRPEMLDIVAYPEIEEVTRVGE"
     gene            complement(70470..70697)
                     /locus_tag="MOX77_000169"
     CDS             complement(70470..70697)
                     /locus_tag="MOX77_000169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000020911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraR/DksA C4-type zinc finger protein"
                     /protein_id="HCA3355854.1"
                     /translation="MSIDVDDSMAQNESQVNIDNRFAEIRAALRIKGHVSRRHCRDCG
                     DEIPDSRRESIPGVSLCMYCQEWRESGDKKQ"
     gene            complement(70687..72486)
                     /locus_tag="MOX77_000170"
     CDS             complement(70687..72486)
                     /locus_tag="MOX77_000170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001029725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB family protein"
                     /protein_id="HCA3355855.1"
                     /translation="MAKAPLLNLNNALLQGAKESSAATTAAVAIMPTSEMPMVLTLDE
                     VAPNPDNPRTTRNPKYDEIKESIRARGLDTVPKVTKNPDIPGSPYIFSDGGNTRYAIL
                     RELFAETQDERFYRFHALFKPWPGRLECLVGHLAENDVRGDLTFIDKALGIKKARAIH
                     EETLGRTVTLRELADLLGQQGYPIHNSMISRMEHTVEYLYPFMPELLVSGLGKPQIVN
                     LLNLRADALKIWQQYSVMTETDSDFNEIFGHVCTQFDDPEVYSFEMFRDEFIGMLVNV
                     LPHPSLNYDRWLLELDPKARNQRKLFGEPEPVASHLVDADRQTWQSTASLPGTANDEN
                     QQGGSSLKPKLNNAPVLPKQPDPDNDNGDNDDVTGEWFGSCGSPRLPKAEVQNDFLGG
                     PSVLTGDVIPDEYHFIPDAGNIAVSASAFAGAQVGLTADTPSDAVSIASEMPGLSLLP
                     TEPALSSVEFANVGLEPVTDIWVIPALQDDIEHLQDMAYRLAYELAEAMGCEVHVSED
                     KNASAAGFSVSEHGGEFALFLAGLSGHVPNKQFNMFMFCLNFFGSQSAGDTPVFDDVH
                     VVKSLRLIRVIRRLRELQRNMAAEQNDGRRHEH"
     gene            complement(72479..73843)
                     /gene="dnaB"
                     /locus_tag="MOX77_000171"
     CDS             complement(72479..73843)
                     /gene="dnaB"
                     /locus_tag="MOX77_000171"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000018526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HCA3355856.1"
                     /translation="MSHKSVSAVSMLFNVGAETGVLGGLMLDNDRWDEIAPLLNSGDF
                     YYGQHQIIFREIERLVSAGLPIDLITLSESMERKDLLERCGGVAYLAELSKNTPSAAN
                     IVAYAEIVREYSRKRRLVKLGHELHQLASVGDADIPGLIEKAEKQLFSLAQQACDPDI
                     CLSVTTQVADTVSWLESVSGGSGVTGTATGFAELDEKTCGWQDGDLILLGARPSMGKT
                     AEALKHAVAALEGSPGKTVQFYSIEMPTQQLIMRLLSMLARVPFDNLRKGLLSEGQWS
                     LLADAVAKLTSWEGRLLIDDTSYQTPSTLRISARRNVRKYGQPSLILVDYLQLMSCPG
                     RENRTQEIQEISRSLKSLAKEIRCPVAALSQLNRSVEQRQDKRPMVSDLRDSGSLEQD
                     ADVIMFLYRDEVYNEHSPDRGIAEIILGKQRQGPLGTVKVRFEGEYMRFSEYHLGYGE
                     VSYG"
     gene            complement(73840..74790)
                     /locus_tag="MOX77_000172"
     CDS             complement(73840..74790)
                     /locus_tag="MOX77_000172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000068773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HCA3355857.1"
                     /translation="MAQQVSPHSLLLPDEQQFPVVLPVVSTKGGEGKSTKAGNIAGYT
                     ADAGLKTLLIDGDYNQPTASSIFKLHYEAPCGLYELLMQTADLNKPDSIISRTVIPNL
                     DVIISNDPDDRLSNDMLHAADGRMRLRNVLQHPLFRQYDVIIVDSKGAGGVMVELVVL
                     AATQSVMGVIKPILPDVREFLRGTVRLLSKLLVLEPYGIHIPDIRILANCVEPTVLDR
                     NTLNELKAIVDKGQYPQSDRIAISMLNTEIEQLEVYKRGHACGQPVHRLEYKTDRVSL
                     PAAESMHHLVCELFPQWKDKFDAVLVNRPQPGFGQGADEV"
     gene            complement(75088..75162)
                     /locus_tag="MOX77_000173"
                     /pseudo
     CDS             complement(75088..75162)
                     /locus_tag="MOX77_000173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003842122.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
     gene            75719..76471
                     /locus_tag="MOX77_000174"
     CDS             75719..76471
                     /locus_tag="MOX77_000174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-specific acid phosphatase"
                     /protein_id="HCA3355858.1"
                     /translation="MKSRYLLFFLPLIVAKYTSAATMQPFHSPEESVNSQFYLPPPPG
                     NDDPAFRYDKEAYFKGYAIKGSPRWKQAAEDADISVENIARIFSPVVGAKINPKDTPE
                     TWNMLQNLLKMGGYYATASAKKYYMRTRPFVLFNHSTCRPEDENTLRKDGSYPSGHTA
                     YSTLLALVLSQARPERAQELARRGWEFGQSRVICGAHWQSDVDAGRYVGAVEFARLQT
                     IPAFQKSLAKVREELNDKNNLLSKEERPELNY"
     gene            complement(76712..77203)
                     /locus_tag="MOX77_000175"
     CDS             complement(76712..77203)
                     /locus_tag="MOX77_000175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HCA3355859.1"
                     /translation="MISTPEPLHAGHILTPFCCGVDSIDNWLKQRAMKNQTTGASRTF
                     VCCGSDSNVLAYYSLASSAVTTNTSPGRFRRNMPDPIPVVVLGRLAVDKSLHGQGVAR
                     ALVRDAGLRVIQVAETIGIRGMLVHALSDEAREFYQWVGFVPSPMDPMMLMVTLGDLV
                     ESV"
     gene            complement(77200..77493)
                     /locus_tag="MOX77_000176"
     CDS             complement(77200..77493)
                     /locus_tag="MOX77_000176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1778 domain-containing protein"
                     /protein_id="HCA3355860.1"
                     /translation="MPAANSMAMKRETLNLRIKPAERDLIDRAAKARGKNRTDFVLEA
                     ARAAAEEVLIEQRIIMADPEAYQEFLVRLDQTPSPNAALRKTMQTPAPWEQEK"
     gene            78298..79173
                     /locus_tag="MOX77_000177"
     CDS             78298..79173
                     /locus_tag="MOX77_000177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HCA3355861.1"
                     /translation="MLKVFNPSPVQVGSIECLQSAQNWQRKSLSLQGLNLLQSVLIKL
                     TTGKISITTSSGEYITASGPMLIFLAKDQTIHITMEETHEQLNYNLIELDSASIKNAY
                     NFFLYEHADFSAPLTKPTTKHLLAPIETGVARVFNLLHSSNKSQKLSQDKKEYLIRFL
                     LSEFIYEPEAFALFRELSQNTLAENIYNIIISDISRKWALKDISDSLYMSCSTLKRKL
                     KQEHTSFSEVYLNARMNKATKLLRNSEYNITRVAYMCGYDSASYFTCVFKKHFKTTPS
                     EFLAFLSSSRHQYVN"
     gene            79170..79457
                     /locus_tag="MOX77_000178"
     CDS             79170..79457
                     /locus_tag="MOX77_000178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463179.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spore gernimation protein GerE"
                     /protein_id="HCA3355862.1"
                     /translation="MRYLTMQYKNKAKHINIRDGILLLAKKFDLTLSEKKVIYYVAAG
                     LSVKSCSNLLDRNIKTISTQKRSAYKKMDITTDVELIHLMLNEFYISVDIT"
     gene            79534..80048
                     /locus_tag="MOX77_000179"
                     /pseudo
     CDS             79534..80048
                     /locus_tag="MOX77_000179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000370525.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(80335..81240)
                     /locus_tag="MOX77_000180"
     CDS             complement(80335..81240)
                     /locus_tag="MOX77_000180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjiK family protein"
                     /protein_id="HCA3355863.1"
                     /translation="MRYDISRDAICYGFFMRLLKRVIVVVLLGVILFMVRDDIRYVYQ
                     LILKYGDKPSALALSSYKAVIQQKPVAGVKSNLSGLTYSAEDRMLFAVINNPPELVWL
                     TTEGQLVGRMPLQGIHDPESIAWSGGNQFQIGSEKDGAVYKTQVDIQRGAMQIISMVK
                     LEGYDKAKNKGLEGTAWDAKNERLYAAKERKPIMIKEVEMSKNGITRALPSAITASVS
                     DVSGLEYHAPTDSLLVLSDESKMILEVSSEWRVRDRLFLTAEWSGLRDDIPQPEGIAM
                     DNENNLYIVSEPNLFYKFSCDIQND"
     gene            81544..82944
                     /locus_tag="MOX77_000181"
     CDS             81544..82944
                     /locus_tag="MOX77_000181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1996 domain-containing protein"
                     /protein_id="HCA3355864.1"
                     /translation="MKLNLITVSLATLVAAGAFPAHAGPQAHVVCGYHHTLGDDAIMM
                     FGKANQAMWHDFFGNTHTDAVSTYQTLRAQPDTTCDNKADSSGYWAPSMKLPDGEIVN
                     PAYQKTYYQSTNVAQYPLHPFPAGLELLAGDHHGTGPSSAITFLCANGKGYTNKVGEI
                     CGLRKAGDAVQFNIGIAFPNCWDDVNLKPTHSHNNAIYADHGKCSADYPVKIPTVNMN
                     IAWVLPQISSLDTSKVELSMDPVMHGETREERWGSIYTAHADFMNGWTEDGAQFMTDL
                     CMNQGLDCGTAVPYAYSKAEENTWVSSEDDKPHASVDTLYVQDDWTNGGRTQHPETLT
                     LVKFKIPPLPANMDASLFKYRIRLFGGKTETNGADQIFFYPTSSDWHASSVSWNNKPA
                     INYRSDAVLYLNHSHEYRMVDVDKAVRKALAEGKTEISWYIGGDRQGNHYDFMPADSK
                     QSLVLMLTGFKKTPEL"
     gene            complement(83028..83681)
                     /locus_tag="MOX77_000182"
     CDS             complement(83028..83681)
                     /locus_tag="MOX77_000182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone"
                     /protein_id="HCA3355865.1"
                     /translation="MPCKPDKRSVIRRNISGAIAMPSRAVLPRILGALFYYSPERPEV
                     KALFDCLPTLPELYPWRDRGHIESLCASWSLPDDDALTWQFSVLFEGQGKMPVPPWGS
                     VYLEKDNLLMGETTADYRAFLQSQGMVFTDREREPEDQFGLMLLACSDLLAQGDNVAA
                     NRLLEAHLLPWGFRYLELLQRNTVSAFYARLAIVATCYLQDVQQQQGLQPEKKRLFF"
BASE COUNT        21603 a        22091 c        19681 g        20388 t
ORIGIN      
        1 caggtaatcc cggaaactga gggcgggtgg tggattcgtg aagttggcct gtttgatgaa
       61 accggtgcgc tgatcgctgt gggtaactgc cctgagagct acaagccgca gctgacagaa
      121 gggagcggac gtacgcagac cgtgcgcatg gtactgatta ccagcagcac cgataacatc
      181 accctgaaaa ttgaccctgc agtagtgctg gcaacccgta aatatgtaga tgataaggcg
      241 ctggagctga aggtatatgt agacgacctg atggcaaagc atcttgctgc gccggacccg
      301 cattcacagt atgcgcagaa ggacagcccg acactcacag ggattccaaa ggtaccgacg
      361 ccagcggcgg gtaacagcac taaacagatt gcgaacacgg aatttgtggc atcgtctatt
      421 gcggcaatgg tggattctgc gcctgcagca ctggatacgc tgaacgagct ggcagcggct
      481 ctggggaatg acccgaattt tgccacaacg atgttaaacg ctcttggtgg aaagcagccg
      541 ctggacaata cgctgacgaa tttaagcgga aaagatgtcg ccggccttct cgcatacttc
      601 ggtttaggag aaacgataaa tcgtgccgcc gatgcgctac aaaaatcaca gaacggtgca
      661 gacattcctg acaagccgcg gtttgtacaa aatatcggtt taaaagaaac cctgaacccg
      721 acaaaacgcg tgagtatagg caatatcgga accggcgttt ttgacggcag cacaccgtgt
      781 ataaatatcg gtgacagtga cagtggattt atcggcagcg cggatggcgt actggatatt
      841 tactgtaacg gtgccaaagt gggttatatc aatggtaacg gattacacat gctcactgat
      901 attcatttcg ataatgcgag catgaccact aatggtgaca tttttagttc agtgtggggg
      961 gataactggc tgagtatctg gattactaat cagctaaata cccgtggaac gattgactgg
     1021 atcaatagtg aactggcaat tcgtgacaac aacatcaaca cccgcgccac cattgattat
     1081 gttaaccaga ctttcgcccg taaaaatacc ggcagcattc aggactgggg ctggattctg
     1141 gacgacagca ccggatttat aatgcagtgg ggaacacttg gtaactcaaa cggaacctac
     1201 aatttcccgc gcgctttccc tgttggttgc tttgccgttt ttgtaaccaa taccaacgct
     1261 cagggcaccc aggtggataa cgcattcgga tacccggtga gcaacagtca gttttttgcc
     1321 gccaccaagt catcaggaat ggccaatctg gtcaataatt ttcctgtagc ctggtttgcg
     1381 attgggagat aaatatcaat gagcgaatat tattacagct ttaaagaaaa aggttttttc
     1441 tggcaaccgg ataccgaatc cgataattac cctgacgatt taattcccct gacagatgag
     1501 tattatcgcg agctgatgca gggccaggtg gacggaaaat atatcgagca caggaaagga
     1561 ggcccggtac tggttgagca tcgcgaatat acgcctgaag agctggttgc acaggctgaa
     1621 gccagaaaag cggaacttct tgctgaggca gagtcagtta ttgcgccact ggcgcgggcg
     1681 gtaaaactga aaattgccac agatgaagag attaaacggc tggaagcatg ggaactttat
     1741 agcgtaatgg taaaccgggt ggatacagct aacccagact ggccggagaa accagctcag
     1801 atataaaaat atagatatgt agtagagact gctgctatat gttatatagc agcaatggct
     1861 attttttttg atggttgagt gtataatttt agcactggta aatgacggtt tagctccgga
     1921 gttagttcct ggggaaaatt atggatacta ttggttcata ttaatcagga agaggctccg
     1981 catatttttt ggtttttctg tgttcaggga gtgtattgta tatatttatt agcaatgttt
     2041 tctagtatca gttggaattg ctgtggagtc ggcatagcac actcattaaa cagtggtgca
     2101 acttctgtca taatgatctt ctccgcatag attttaaagg atgcctgctg atgttgattg
     2161 ataaacatac gtggatactt actgtttgct gatgaaatca acggagttat aaaaggattg
     2221 gcccctgcgc cgcttggcgt aaaaacgtca tttttggttg ttccgggcag acctgcattt
     2281 ttcgctgctt cgccaatttc ctgaagaaaa ggcgctatgt tgatcccttt gctgatgagc
     2341 aaattacaac actgatcttt attcttgctg taaactgccg atagtatagc ttcacgggtc
     2401 tggctggcgt atgcggggtc tttactcgca ctacctctaa tatctatatc attgagcgtt
     2461 tgaagcataa aatctttaac gactttattt gtcaacactg cccggccctc agatgcgctt
     2521 cctcggtgaa agtgtgttgc agaagactca gtgttcttat gcgaaataaa acgttccgat
     2581 aattttgacc ttaattcgat gaagtgattt tttactgcga gaatactttt tgctaaagaa
     2641 tttttctcgg ttgatttttc ttttagtagt gtggtttcct gtttttggat tctaaaattc
     2701 tggggagata aagttatttt tgtcacggta atgatccttt tatatgtaca taactcattt
     2761 atatatagat agcaggaata cttttatttt ttatagcaaa tgctatgtcc atctgattga
     2821 tgaattagaa aaattcggct gattcaatta atgctacaaa tagtactatt tttattttcc
     2881 agaaactttc aaaaaaagtc cttttcgctc aggaggagcc ttgccgttct ggcattgaaa
     2941 tggagtgtga gctgatcgtt gagcgtacca gcgccgggtt ggaagtggtg cgttcaaaag
     3001 gtcgtattgg tggcaggcgt ccaaagctca ccccggaaca atgggagcag gccggacggt
     3061 tgcttgccgc cggtgaaact cgtcatcgtg ttggattgct ttttgatgtt agcatttcca
     3121 ctctttacaa gaaattccct gtaaatcagt cgcgttgaaa gtggcgatat tgtaccagca
     3181 ctgacacatc gtgaaatacg tgcgccgcac gcctggcaac cagaacataa ggtatccctg
     3241 tcaaccggag agactgcctt atggctcagg attaccacca cggggtgcgc gttgttgaaa
     3301 tcaacgaggg cacccgacct attaccacgg tgagcactgc catcgtgggc atggtctgca
     3361 ccggcgatga tgctgatgcg tccgtgttcc ccatcaataa gcctgtcctg ctgactgatg
     3421 tgctcaccgc cagcggtaaa gcgggggagt ccggcacgct ggcccgctcg ctggacgcga
     3481 ttgcagatca ggcaaaaccc gtgactgtcg ttgtgcgtgt ggcgcagggc gaaaccgaag
     3541 cggaaaccac ctccaatatt atcggcggcg taacttccga cggtaagaaa acgggcatga
     3601 aagcgctact gtcggcgcag tcgcagctcg gtgtcaagcc gcgcattctt ggggtgccgg
     3661 gacatgacac tcaggccgtt gctactgaac tgctgggcgt ggcgcaaagc ttgcgcgggt
     3721 ttgcctacct tgctgctaat ggctgcaaaa cggtggagga agctattgcc tatcgcgaga
     3781 atttcagtca gcgcgaggga atgctgatct ggcctgactt catcaacttt gacaccgtgc
     3841 tgaaagcaga cgcgacggct tacgcctccg cccgtacgct cggcctgcgt gccaaaatcg
     3901 acgagcagat cggctggcat aaaaccctgt ccaatgtggg tgtgaacggt gtcaccggca
     3961 tttccgctga tgtgttctgg gatctgcagg acccggcaac cgatgcggga ctgctgaaca
     4021 aaaatgacgt caccacattg atccgcaaag acggcttccg cttctggggg tcccgttgtc
     4081 tcagtgacga tccgctgttt gcctttgaga actacacccg cacggcgcag gtgctggctg
     4141 acactatggc ggaggcgcac atgtgggcgg tggatggcgt gcttaatccg tcgctggccc
     4201 gcgacattat tgaaggacta cgcgccaaga tgcgcagtct ggtcaaccag ggatacctga
     4261 ttggtggtga ctgctggctg gatgagtctg ttaacgataa agacaccctt aaagccggga
     4321 aactgaccat cgattatgac tacacgccgg tgcctccgct tgaaaacctg atgctgcgcc
     4381 agcgcatcac cgatcgttac ctggtcgatt ttgccagccg tgtcgctgca taagggggaa
     4441 tcatggcttt accacgcaag ttaaaacacc tgaacctgtt caacgacggg aacaactggc
     4501 aggggatcgt tgagtccctg accctgccga aattcacccg caagtttgag aagtatcgcg
     4561 gcggcggtat gccgggcgcg gtggacgtag acatggggct ggatgacggc gcactggaca
     4621 cggaattttc aatcggcggc accgaactgc tgttattcaa gcagatgggc aaggcaaccg
     4681 ttgacggcat ccagttgcgt ttcaccggtt ccattcagcg tgacgatacc ggcgaagtgc
     4741 aggccgttga gctggttgtg cgcgggcgtc ataaagaggt ggattccggc gagtggaaaa
     4801 ccggcgagag cagcagcacc aaagtcagca gtaccaacag ctacgcgaag ctgaccatta
     4861 atggtgaggt gctctatgag gtcgatctgg tcaacatggt agaaatcgtt ggcggcgtgg
     4921 acctgatgga agaacaccgt aatgccctcg gcctctgatt aaccttaacg gcgcgggcag
     4981 ccgcgccagt atttcattaa caggaaacga acatgagcga caagctgact gaaaagaccg
     5041 taaaactgga tacccccatc atgcgcggta aaactgaaat taccgaaatt gtgctgcgca
     5101 agcctcagtc cggcgcgctg cgtggcaccc gtctgcaggc cattatggat atggacgtgg
     5161 gcgcgatgat gactgtgatc ccgcgaatct cttccccgac gctgaccgcg caggaaatgg
     5221 cagagctgga ccccgccgat ctgacagcaa tggctgtaga ggtggtgact tttttgttgc
     5281 cgaagtcggt gcttgccgat ttgccgacaa cctgacggtt gatgatctgg tggcagacat
     5341 tgccaccatc tttcactggt cgccgtccat cactgacgtt atgccgctga ctgatgtgct
     5401 ggagtggcgg cataaggcaa ttcagagaag cggggccagc gatgagtgat aataacctgc
     5461 gactgcaggt agttctgggg gcggtggata agttaacccg cccatttaaa aatgcacagg
     5521 ctggctctaa ggagctggca tcagctatta gacaaacccg cgatcagatt aaaaagctga
     5581 gtgatgctgg aggtcagctt aaatctttcg atcagctaac tcaaagtgtt agccgtactg
     5641 gtgccgaact ggatcaggcg aggctacgcg ctcaaatgat gacgcgcgaa atgtcttctt
     5701 tggaatcccc gacaaaaaaa caaacgcagg cgcttgaagc tcagtggcgt gctgtttcac
     5761 gtcttgaaca aaaacagcaa caggaaactc gccagatggc ggcagccaga gctgagcttt
     5821 atcggctggg gttatctgct gggggcggag cgcgtgagac ggcacggatt gcacgagaaa
     5881 ctgagcggta taaccgacag ttggctgagc aggagcgcag gctgcgtgaa gttggcgagc
     5941 gtcagcgaaa gctcaacgcc atcaaagcca aggctgaaaa gacccgcgag ttaaggaact
     6001 ctctggcagg taatggtgca ggggcgatgg cggctggggt aactactggc atgacgttgc
     6061 tggctccagt aaaagcctat tcagaatcag aaaatgcagc gaatcaactc gccggttcca
     6121 tgatggggcc gggcggaaag gtagcgcctg aatttgaaaa aattaaccgg cttgcagttg
     6181 ctttgggtga taagctgccg ggaacaacag ccgactttca gaacatgatg actatgctac
     6241 gccgtcaggg tatgtcggcg caggtcatcc tgggaggctt gggagagtca gcagcttatc
     6301 ttggcgtgca gttacagatg gctcccactg cagcagctga gtttgcggct aagttacaag
     6361 atgctactca gacctccgaa aaagacatga tgaatctgat ggacgtgatc cagaaaggat
     6421 tctacgcggg ggtagattca ggaaatatgc tgcagggttt ctcaaaaatc agcagcgcga
     6481 tgaatatcat caataagaag gggttggaag cggtcaaaac tttcgcgcct ttgttggtta
     6541 tggctgatca ggggagtatg gctggtgagt ctgccggtaa tgcataccga aagatttttc
     6601 aggccgctct ggatgctgac aatattaagg cggttaacga tgacctgaaa gaaaagggcg
     6661 cgggtattaa attcaacttc tctgacggga agggtgggtt tggtggtctg gaaaatatgt
     6721 atgcccagct ggagaaactt aaaaaattaa atccagaaac ccaaatggca accatgaaag
     6781 atttgtttgg caatgatgcg gaaacgctac aagcgctgaa cattatgcta tctaaaggga
     6841 ttgaaggata tagagaaact gcagcaaagc ttgaaaatca ggcatcgctt agggagcgtg
     6901 ttgatgcatc gctgaacacc ctggggaata aatgggaggc tgctaccggg acattcacta
     6961 atgcgatggc gagtattggt gaaaccgtag cacctgcatt aaagaacctc gccgattggc
     7021 tgggggagtt agcctctcgt ttggacggtt ttgttaaacg ccatccctcg cttacgtctg
     7081 ccttattcaa gatggctgca ggatttgccg ttgctgcaac ggctgtaggg gctatctctt
     7141 tggcgctggc atcaatcctt ggtccgatgg caatcatcag agtgagcgcg ggcatgttgg
     7201 gcctgaagtt tgcgtcggtg ggtggcttgg ttcgtgctgc gctgggaggg ctcgggaaat
     7261 cagttttatg gctgggccga ttgatgtttg caaaccctat actggctgtc atagggctga
     7321 tcgccgctgg tgctatttat atctggcaga actgggacac gcttgggcca aagttcaagg
     7381 ccatgtggga tgccgtatgt aatgccacag gtacggcatg ggattggatt aaagaaaagg
     7441 ccagcgccgc gtgggagggg attaagtcac tgttctttaa ttataccttg ccgggattaa
     7501 tagctaaaaa ttgggatgca ataaaatctg gcgtttctga ggcgtgggcc aatatcagac
     7561 aatctatcag tgataaatgg aatgcgatcc tggctgatgt ttccgcgctt cctgcgaagt
     7621 ttcaggacac gggcagcgcc attattgaca gcattctcga tggaattaat gccaaatggg
     7681 agacactcaa aagcaagctt tcctcagtca ccgattatct gcctgactgg atgactgaaa
     7741 ataataaaac acaagacaaa gcacaggtgc aggtggttgg tggcgcagcg gctgctgctg
     7801 ttccgtttgc cgggatgtat gacagcggtg ggattattcc gcgcggtcag ttcggtattg
     7861 ttggggagaa cggccctgaa attgtgaacg gccccgcaaa agtgaccagt aggcggcgca
     7921 ctgccgcgtt ggcttccatc gttgcaggtg tcatgggcgt agcggcagcg cctgcagagg
     7981 ctgctccact acatccttac agtctgccta ctgcggcata taaacaaagc cagcctgcga
     8041 aatctgccag cgcgccgcca gtgatgcact ttgaaactca cgcgccgatc actatctatg
     8101 ctcagccagg gcagagtgcg caggatattg cccgtgaagt tgcccgacag cttgacgaac
     8161 gcgagcgcaa gaccagggct aaagcacgca gtaatttcag tgatcaaggg ggatatgaat
     8221 aatgatgatg gtactggggt tatatgtctt catgctgcgt acagtgccat atcaggagct
     8281 gcagtatcag cgaagctggc gacacgccgc caacagtcgg gtgaaccggc gaccatcaac
     8341 gcagtttctt ggcccggata atgacccgct gacgttatct ggcgtactgc tgccggaagt
     8401 caccggcggc aggctgtcat tgctggcact tgagcaaatg gcagagcttg gcaaagcatg
     8461 gcccctgatt gagggaagtg ggaccattta cggcatgttt gtgatcgaga gcctgagtca
     8521 gacaaaaaca gagttttttg aaagcggaat gtctcgccgt attgagttta cgctgaccct
     8581 gaaaagggtt gatgagtcgc tgtctgatat gttcggcagt ctcagcgatc agctcagtaa
     8641 cctgcaggac tctgcaacgt ctgcgatagg taatattaaa aatacggttg gagggttgct
     8701 gcagtgaatt ttagctctga tctttttggc ctgaacagca gaagcccggc tttcagtatc
     8761 actattgaag gtaaggacgt gaccaccgcg ctggatgcgc gcctgatgag tctgacgctg
     8821 accgataacc ggggttttga ggctgaccag cttgatctgg agctggacga cgccgacggg
     8881 cagatcgttc tgccgcgacg tggtgccgtt attcaactgg cgctggggtg gaagggccag
     8941 ccgcttttcc caaaaggggc atttacggta gatgagattg agcacagcgg tgctcctgat
     9001 cgtctgacta tccgtgcccg tagcgctgat ttccgtgaaa ccctcaatac ccggcgcgaa
     9061 aaatcatggc atcagacaac ggtgggggag gtggtaaagg aaatcgccgc ccggcataac
     9121 ctcaaagtgg cgctgggtaa agacctgacg gataaggtgc tggatcatat ggaccagacc
     9181 aatgaaagcg atgcaagttt tctgatgaaa ctggcgagac agtatggggc gattgcttcc
     9241 gttaaggacg ggaacctgct gtttatccgg cagggacagg gaagaacggc gagcggcaag
     9301 ccgctgccgg ttatcactat cacgcgcaaa gccggtgacg gtcatcgttt taccttggct
     9361 gatcgtggcg cgtatacggg cgttattgcc agttggctgc atacacgtga accaaagaag
     9421 aaagaaacaa cgcaggtaaa gcgccgtcac aagaaagtcg ccacacccaa agagccggaa
     9481 gcaaaacagg gtgattatct ggtgggaacg gatgaaaacg tgctggttct taatcgtacc
     9541 tacgccaacc gcggcaacgc tgagcgtgcg gcaaaaatgc aatgggagcg cctgcaacgt
     9601 ggtgttgcgt ctttctccct gcagctcgca gaggggcggg cagatctcta caccgaaatg
     9661 ccagtaaagg tgagcggttt taagcagcct atcgacgatg ccgaatggac cattacaacg
     9721 ttgacgcata cggtcagccc ggataatggt tttactacca gtctggagct agaagtaaag
     9781 attgatgatt tagaaataga ataaataagt tctcaataat aatttcttgt gtatcattat
     9841 tgagaactta atggcggcgg agaaactcaa aatgatgaat tgtccaaagt gtggacactc
     9901 agcgcacact aggagcagct ttcaggttac ggacagcaca aaagagcgtt actgccagtg
     9961 ccagaacatt aactgtggta gcacctttgt cacccatgaa acggtagtgc gctttatagt
    10021 tacgccagca ttggtaaata acgctcctcc acatccaaca gtgagtgggc aagggcacat
    10081 gaatttttaa ggtaagttga tggcattctt actcaaaaag acaagggagg aatgccgcaa
    10141 gaaaccaaag aaaatcatgg gtttcattaa acttcattat tgaagaggtt taataaagct
    10201 ggttctatag gtgcgcgcct gctcgtcttt cattgtgcca gcttttctac actcatcccc
    10261 tccagcattg atttcaaagc cctgatcgct agtgacatta agaagtgtaa ttctcttgat
    10321 cgtgccaggt ttccacttgt tcatataata atcattacag atgccttgga acatcgattc
    10381 agctgcatct accagcaaaa gtcgtttgtt atatctgata gtcagcccac catcttctag
    10441 gctgtgcgtc ctggtatcgt aaacagcaat caggttttgg atagaagatg ggattttgtc
    10501 agcagatgcg ctgaagctgg tgatgagcaa taaggctatt agaggtttat tcatatctgt
    10561 agtcctttaa tcgataaatg cttgccgcca ttttgtcgcc actaccaaag aaaaaggggc
    10621 tacgttttca cgtaacccat tgttttattt ggtggagctg gcgggagttg aacccgcgtc
    10681 cgaaattcct gcataccctg tcctctatcc tgaagagctg cagatattcg gtgtagtgat
    10741 cgcattcgta cacaaaaccc ggagtaaaga ctgatgttcg ccctggctga cgtcaacagc
    10801 ttctacgcga gctgtgaaaa agtatttcgt cccgatttac gtaatacacc tgttgtggtg
    10861 ctcagtaaca acgatggatg tgttatcgcg cgttcaaaag aagcgaagca actgggcatt
    10921 aaaatggggg ttccgtggtt tcaactgaaa acaaccgaat ttcctgtacc tgtcgttgcg
    10981 ttctcgagta actacgaact ctacgcgtcg atgtcgaacc gtgttatggc gcatctcgaa
    11041 gaactggcac ctcgcgttga gcagtattct atcgacgaaa tgtttcttga tgtgcgcaat
    11101 attgacagtt gtatcgattt tgaagacttc ggccggcagt tgcgcgagca tgtacattca
    11161 ggaaccggac tgaccatcgg agttgggatg ggaccgacca agacactggc aaaaagcgca
    11221 caatgggcgt ctaaggaatg gcggcagttt gagggcgtgc ttgctctgac ttcaggcaat
    11281 ccaaagcgaa cggagaaact attgtcactg cagccagtag acgaaatctg gggggttggt
    11341 cgccggatct cgaagaaact gcacacaatg gggataacaa ctgcactgca gctggcgcgc
    11401 gcgaacccaa catttatcag gaaaaatttc agtgttgttc tcgagagaac tgtccgtgaa
    11461 ctgaacgggg aaagctgtat ttcactggag gaggctccgc cacccaagca gcagattgtc
    11521 tgcagccgat cctttgggga gcgcgtcaca acatatgaag ccatgcgcca ggcagtctgt
    11581 cagtatgctg agcgtgcagc tgaaaagctg cgcggcgagc ggcaattctg cagacatgtt
    11641 gctgtatttg tgaagacgtc accgttcgct gtgaacgaac cgtattacgg gaatgtggcc
    11701 agtgagaaac tgacgactcc cacgcaggat accagggaca tcatagccgc agcggtgaaa
    11761 gcactggatc ggatctgggt gaaagggcat agatatgcaa aagcgggttg catgctcaat
    11821 gatttcacac caaccgggat ttctcagtta aatctttttg atgaagtgca gccgcacgaa
    11881 cgaagtgagc agttgatgaa agttctcgac agtatcaacc attcaggtat gggaaaagtg
    11941 tggtttgccg gaagagggat agcccctgag tggcagatga aaagagagct actctctcca
    12001 gcttatacca ctcgctgggc tgaattacct gttgcacgat tgcgctgaat cagctcattg
    12061 agactcagtg aaaaaggctg aatttcatgg ttgaaaatca atacattgcc atctgaagaa
    12121 ctgctatcgt agtgccaata accattcttt taatgtgcat gttaacaaaa gaggtttaaa
    12181 tgagaataaa cgtactatta ctaaccagtc tgttagtagc tggaccggca ctggcaggag
    12241 aagctcacgt ttgtaaatca cagacggtag cgaactctgc agcgaatgcc gagttgacgg
    12301 ataacacggt atttaaatgc ggcgaaagca tttccggaac tatcccgtca cttgcccggg
    12361 agggatggaa aattgtgcaa cagacagatc aggcagatgt caccgatcca tcaaaaacat
    12421 acgcacaatt gatcatccag aaggattaat gctgtcgttg ataattcatc acactttcgt
    12481 gcacgctccc tgacgggaat acccccgtca gggtaagatt ttacgcgggt ccggagaccc
    12541 gctcagtttt aacactcgat cttaaattct tcgttgctgg ccgtgatata cagcggtttc
    12601 ctctcgttca gaatgcggtt aatcatgctt ttcgtcagat ttatcgtctc accaaaatca
    12661 tcacccccta cttctgcccg ggcggtatcc caccaggcct catccttttc tggatggcat
    12721 cccttcgcat aagccacttt tcggccacgc ggagtgagct caccggtttc agacataata
    12781 taaacgccat gatccttgac cagtaccacg ccacagtggt ttttacgtgc ctcaagcagt
    12841 accggtttta agtcttttgc actgaatttc agcatgatgt ttctcctgta aaaaaagggg
    12901 agaaacatcc ccaccgggag agtttctccc cggtgggttt accgttgatt tatgcagcca
    12961 gtcgtggctg ctgtggtacc ggttgatcaa tcaccggctg ctcaaactgc tcacgtaccc
    13021 agctgatggc ctggctcatc gcctcaccat aatcgctgct ggtcatcctg ttgatgttat
    13081 ccacctcact gtcccaggtg aacgactcca gcaaaatgcc gtttttatag taaacattca
    13141 ccacaaagca gactggagta aaaagcccgt ccgcgacttt gtcgacccag gacacgatgt
    13201 attccggatt gaactccaga atgtctatct catcgatatc ctgcggcccc acaaataaac
    13261 gcagtgaacc gtactccccg cggaattcgc gcagctgcct gggctctgtc gtgcagttcg
    13321 ccacaaagca tttcagtttc tgatagcaat gctgagtaat gtcctgcaac tgctgcgcca
    13381 gccagctctc aaaacggtgc cagtatcgta ccgttttgct gaatatcacc tgtggaatac
    13441 gccggtgtgc cggtaaatcc tgctggccgg tcacccgcag gtacgtttct tcgtccgcct
    13501 ccgtcagcgc cgcagggttt cccttcagca gcaggtcgca ctgaccactg ctgtgagggt
    13561 gaacccgggg aagccagtca ggttgttctg cctccttcaa cagcatatcc agtccggcta
    13621 tccacagcgt cagtacctgc cggcagcgcg ccagcgtggt ttcatcactg tccagaccgg
    13681 acagcatgac atccatcacc gccatcagtt tttcccggtc aaactgtatc cgggtattca
    13741 cgtagtcgga acggctgccg cgaagctgcc aggtaatatc ctcttcggtt acgtccagac
    13801 acagccgctc tgagaaatgc tggctgatat attcgtcaat aatgctcacg ggaaaatcct
    13861 ctctggttta ttaaagggat tttccccctc aggggaaaat cccctgaggg tatagtggtt
    13921 aatcaggcgg ccagtttcag tgccggccgg gttaaaggta tctcaaccag cgacgtccgt
    13981 tcctggcgta gccagtccag ggcctcgctg acaacattct gccagtcgct gacatgggga
    14041 tgttccacat caatcacgtc ggcgtctcgc ctgaagacgt tcagctccga atcgttgcgg
    14101 tatattaccc gcacttcaaa gcgaaccggc gtcagattac cggccataat ttcctccaga
    14161 taatcttcca gcgatgcgtc gtcatacgcg tagagatact gacattcatc aatatcccgt
    14221 ccggacatat gcagctcaat acgtccgaaa gccaggttaa agcaccgtat tttcctgggc
    14281 tccacgtgca gccggcgata aagacgcccg agttgcacca gacaacgatc ttccacctga
    14341 taaagttcac gggctatcca cgccataaaa cgcgtccagt aaggcatcgt cgctgcaagc
    14401 tgttcccggg ggaactgctc tccggacatc aggtgacact gggcggtcag gcgtaagaat
    14461 gcatcatccg gcagcgccag cagtgcctgt gggtcccccg gcagcagacg atcaactcgt
    14521 ccactgcact ccgtaatcgt ccggggcagt atcgacatat cctcagacac tgttgccagc
    14581 gcgtcgagac cacgaatcca tagtgtcaga atacgctctg cctgacggca tctttcccgg
    14641 agctccggat taagcgccac gtcatccagc ataaactgca tcacggacaa taaccggtca
    14701 cggttcagta ccatatcggt attgacgtaa tccgactccc gatcgtccac ctggtaaaaa
    14761 acctcctcag cgttcacact gaggcccagt gctttactga gctgccgttg aatatagaaa
    14821 ctggccagca taagtgactc ctgttcagaa caggaattct ccccacaggg agaaccctgt
    14881 cgggatgaag ataaatacgc aactaggccg ctttacgcgt ccgatctgcc tgccaccggt
    14941 gatgccaacg acccagtaca aacattggtg ttgccatctc ccgtttaatc tccacggtca
    15001 ggctgttgcc ggtagccaca atggccggaa tacccatcag ggatagctgg atgtaacaca
    15061 tcatcgaggc caccgggtca atatcgacac agtacgctac catctgtttc tgcggattaa
    15121 atcccgcctc cagcatggct tctgccagcg caacgaccat acttccggca ccactggcag
    15181 gatcgctgac agtaataaag tctcgttccc cgctggaaag ttcaggtata cggtcactga
    15241 gtgtcattcg cgccatcgcg tacgaaacgc tgtaaggcgt gaaatactgt gcgttatgaa
    15301 aatttcccag tccggatatc atataaattc gccccaggaa atctgttgga ctgaattcca
    15361 gccccataac aacttctgac agtaaacggg ccatgttgtt tgcatcttca gctgaatagt
    15421 gggatacccg cctcatgtag tccgcttcaa aatcaggatc ccgatgtaca gcgttgtaca
    15481 gtgaacaggc cgccatatgg acgaaatcac tgaatacctg ccagcggctt tcatgaggtg
    15541 caataccgtt aaagatactg acaaaacgat gtatatgcgg gttctccttt cccctgcggg
    15601 cagcccaggg cagcgccaca acattgtcat taccatccgg gtcatcaggc ccgtcatcat
    15661 tcgccgcact cttaccttcc gacaccgccg gtgccaggag caaaggtaaa ctttcgacct
    15721 gcaccgcttc cgctttcctg tccggtatac cggatggcac aggcacgcgg taacaggtca
    15781 gcagttcggg acgaatttca gacaaagtca gtatttcact gtctggtcct gcttcgttga
    15841 taaacagcga ccgctgaggc tggtcgtagc gttcccactg gtaaatgcgg gccagtgcat
    15901 taatcgccat cagtggagtg atcccacatt caatatgccg ctcaaccaca ctgcgacatc
    15961 ccagcgtggt gtcatcgaga gaaaaaccgt aatgcgtttc aagaatcaat gaggccatct
    16021 tctgccacat ctccactgtc gtcatcgagg gtcttcgctc tttcagccac atcatcgcct
    16081 ttcgcgctgc ttccgcagcc cgaaagagac gccacgggtc cccctgtaaa tatgtcaccc
    16141 agggtgccac atccagcctg gatagcatcg ctcccggtaa tcccagagca gccgagagaa
    16201 atgcggcgcc cagttctgca accagggcct catgaacctc atcggtacgt gtatccactg
    16261 ttaatccgaa gcgatgtaag cgctgcggat gtccggtagc ctgaaccagc agattcagta
    16321 tgtcctgcca gtatgtctcc tctccgacat acgatgccac gggtggaagc tcaatccggt
    16381 catgcaatgc ccggtatacc ggcaaaacgt tgtccctgtg gatcacggga accccactgt
    16441 tctgaagcag gtcgcggatc acattcagtg acggctgagg tcgtggaggc agtggccacc
    16501 ccggttgcag cgtatccggc agaccatcac actgttcagg gttaattacc ttgaaaagcg
    16561 ataacgaagg ccggtagcgg accagggtga ctggcttttc accggatctg acctgaccgc
    16621 ccagttggcg gaggtcatct ccggtcagcc accttcctga acgaagcgaa cgctgctgca
    16681 tggcctgcca caataacagt acgttaatac cggtaaacgg cacgcccgta agcgcgtgtt
    16741 ccggtaaccc gggaattgtg ccccgccacg gtacctggcc tgcagccagg ctactgataa
    16801 gtcggccgga gataaaccgg ctgatatcat ccggatgtaa cgatgtgttc atatgctctc
    16861 ctgaaaaaaa gggagagcgc ccccacaggg agtcactctc cctacgggat aaggttcagt
    16921 aacgcaggat gcgtacgtga ttacggtacc agccgaccaa caaatccgag gatacggcca
    16981 ggcaacgtcg ccagctcctg tccgatcagc aaaaactgct caggatgaaa gtgaccgtat
    17041 aacaacactg atgtcaccac gcccgttaag gtcatcccca acagcagacg gttacgccgc
    17101 cgccggaact gcgcctcttt ttgctgtacc tgcagatgca ggtacagccc cagcgtctgc
    17161 agctcggcaa agcgggcaaa ttcttcccgc cttaaggcct cgcatgcctc gtcatagcgc
    17221 agcagctccg tcggatggtt cttcttcaga aagctgcgat aaccgccatc cctcatcgtg
    17281 tgataatgtc ggtcaaattc cgcctgtaac cactggttga aacggttacg ggttcttcga
    17341 aaaacttccg gttctgctac tgtggatgca ggggtttcgt tagtggtcat tacgctcata
    17401 cagactcctt ttgagtaaaa agatctgacg gcgtccccct cacgggtttc cccgtcaggg
    17461 taggtggtaa aactgattaa cgatcgaaag tgagtgtcac ctgaccgtct gaatattcac
    17521 gtttaataca tacgttctgc cacaatgggg catggaggtc accatcaggc gggagacaga
    17581 aatagccaaa ctccactatt ccctgccccg aaggtgcctg actgagtgcc tgaaaaccgt
    17641 ggtatatcaa ccgctgcagc cgttcgtttt cacagtccgg agcctggggg tattttacca
    17701 gttgttccca gaccggctcc tcgatagcga cggccggcgg cgtgctgctc agcagcgcca
    17761 ttatatccat catgcggcct catcattaac cggggctgtt gtcactacgt cagtaaccag
    17821 cactgacact ggagcatttc gccggttctg ccgccggtgc cggctgccaa gaaaccgcag
    17881 caacatctgc tcagccacca tcacggattc cctgtcgtct acaaattgtc tctcgctgta
    17941 atacggctcc gcagcctctt caccgaagta aagcagctcc acgccgggtt tcagcgcatc
    18001 cctgagccgg agaacaacgg cccgaccgca gaactgacca tcatcggcca gctgccagcg
    18061 accggtatac accgttcggg ggcgccagtc ggaggcctgc agtctggcct gtcttcgacg
    18121 atataacacc gaaataccgt gatacaccgt cagcccggtc cagcgcatga cgcgccagag
    18181 atggtgcaac aaaaatacaa acaagcgggt ggttaacatc attgtgaatc tccttcttct
    18241 cagaacagac gcagcaccag taacaacatt gccagcatga gggttcccgc cagcttcagc
    18301 aggagcatca ggccaataag ctttatcagt gctgcgcggt cgcgggaata acactcctca
    18361 tgcaccagat ggcgcacgcg gttttcctgc tccggagtca gtgtgttgcc ggttttttca
    18421 caaaccgacg gaaggtgaat gtgagacata ggatccctgt agaaataaag gaacctgccc
    18481 ctgacggggc tgggccccgg ggtgtgaaac aaaacaatac gaccccgtca acaacgacgg
    18541 aaaatatgaa taatagaatt atcaacccat atcaggcctc ctgcgtaaaa tgcgggagcc
    18601 cttgcgggca tccccgcaag ggtaaaaaag ttgatactat ggcattcccc gtctttcaac
    18661 cgccagctgt tcccttatcg ggttgccact gacagacgaa aaacaggaat ggttagccgg
    18721 taatgttccg gggagcacca caaaacaacg gcagcgctca gccagccgcc ccagacaggc
    18781 ctgtagtaca gacctcaaaa agttaaaaac aatctcatgc taagcaggat catacagcca
    18841 gccatccgct tctgcagcgc atatagcccg gtctgcccgg gcttcattgc gccccagaag
    18901 aacagcctgt gtccaaacgg gttcacacaa cattctcccc atatgttcaa tcgagccagt
    18961 cagttcatgt ccggctgttg tcagaacgtc aatatcttct gattcaagcc tttccataaa
    19021 ttctccgaaa gccataccac agttaaatac cgcacattca aactccggtt cctcctgcct
    19081 gtcatcataa agcggatata aaccggcgtt cagagaagcc tggatactca gcaaatcgcc
    19141 ctcaatcagc gaaagccaga tcaaaacgtc agtgcggttt ttcagttgat aaacgttcat
    19201 aaatcctcct gtcagaacag caacagaggg atttaccccc tacggggaaa aatcccctgt
    19261 tgggtggtaa cgttaatgca gtggaaattc gttttctaat cggtcagttc ccaggcatag
    19321 cgaagatgtg caagttcaag tgcctgggag tacgcggtat tcatggcaca gtgaaatgaa
    19381 tcaaacttgc cacaatccac cacctgttca tagcgtggat tcatccagcc ggaacgtttg
    19441 ttgacgactg cgtgaaaatg gtcgttatca tccagccaga cctctgcctg aaaacgcaga
    19501 taaccggtgt gattggcgat ccattcactt ttgccgtgac gtatacgtgg aagtgcctta
    19561 cgcagaatac tgaccagaga agtcagaaag atgttcatag ttttctccag aagtaaaacg
    19621 gagaaaacca tcaccgtatc ggggaggctt tccccgatgg gcaggatgta agatttgtgg
    19681 tttaaacgtc tcaaagcgag cgatacgaac gagcgctcct tcaaagaaga cactggacca
    19741 aaatgatcaa cagtctgtac ccggaatacc ggtataaaac ctgccacagt gggaagattt
    19801 cccaccggaa atgctgaaag acgagtatcg aagtgtgaat gttgaggata tcttcatcgc
    19861 aaaaaatgcg acagccattt ccaaagatta aagggctgta ccacccgaag gcgtcacctc
    19921 tcaggctacg gtgacattgg tgtgcaatca cccgaaggcg ttcctctcag attgccggaa
    19981 cattggttat gtgatcaccc aaaggcgttc ctctcagatc actggaacat tggtggttgc
    20041 ctaaggcaac gttttaagcg ctatcatatt aaccagagcg agaatgaaaa ttcaagaccg
    20101 taactgaagt tttttaacgt gctaaagaca ggtacatgag aagtctgcac gagataaagc
    20161 tggaaatttc aggtactaaa aaacactcca ctgaaagtca atctttcata ctgacgcaaa
    20221 taatcacttt ctgtgtatct gcttttatga attaatgtaa accctcatta gaatcagcaa
    20281 atccctaaaa aacattccct gcctcatcga ctgaacatga gttactcatc ttcagtacca
    20341 tctctgaaat aaacctgttt tacatatctc cctcttccgt ctccatgacc taaatccatt
    20401 gacacctgag catatatttc cttaccagaa aaaccattct tctcataata ttcccgagct
    20461 tcctgtgaaa aatgataacg catactgtga ggtgcttttt cacctgtcag acccgcacgt
    20521 ctgacatgat aacggtaggt atcaatcgcc ttacgaatat caggacgatc aatcaattta
    20581 ccgttatttt ccttcattac tttttcagca taatttattg catgccttaa agcgtcctta
    20641 tcaacaatca gcgtatttcg tcctcttcct cctttcgtac caaaaattac acgaactgaa
    20701 tgttcccctg actcaagagc acgtttccat gtcatcacgg atttacagga ctccactgcc
    20761 tctttagttc ttaaacccag cgtataagaa agtaacattg ttgctgcaac cccccggttg
    20821 cttttctcaa cctccttaaa tgccttttga aattcttccg ggcttaacgg taattttgtt
    20881 cccgacctgc tacttttttc taatccaaga gccttattac tcaggagcgg attattcggg
    20941 tctgccagct tataacgtcc cgccttattc aaaacgccac gaatagcagc ccgctcattc
    21001 tgaattgtcc gcacggaaat cccctgtgat tttctgaact ggagatatcc ggtgacatga
    21061 cgtgttttaa tactgtcggt atgacgtagc ttaataccgt tatcacgaag gtagttcaga
    21121 aagtatttcg cgatacgcat gctgtctgca gccgtcgcgt atgccctgcc ggcatcccgg
    21181 gctaaggtca caaaatcgcg acggaatttc tccacttttg aacgagctgt tttccctgcc
    21241 atattgcccc ctgtatgaca ctggtgaaaa aagacacact aatccctcag cgcatcccat
    21301 cagtcagaac acttgtcgat agttctcact catgaaatga actgtcataa ccagctggaa
    21361 atattagttt ttcgtcatca cagacgttcc ctgcgtgtcg gtgcgttcgt cttcctgact
    21421 cgtctgatat tgtgtagcag ggtagcgcta tgttgagttt ttgcaggagt tcaaccagta
    21481 cgcagtacgg cgaatttaac tccccgtcag taattactga cgcctcaata tcatgacgat
    21541 aaaacctcca ttaatcatta cgttaagctt cacagatgaa accttaacaa cgggttaaac
    21601 acgggccctg agcggccgtc cgtggaaaac ggacgcgacg ggcgttgtag aaaacgtttt
    21661 ttcagcgcat tcctcaaact ggtttcacga acgaatgcac tttttaaact gttcggaaga
    21721 tcaggaaata cgtgctgaag atgttttacg ccttgcggcg tcacttggtt ctcgttttac
    21781 tcgaacgcaa gtgacgccgc gtatactcaa actgtccaat gcatcgtccg gaagatgccc
    21841 caaatgttgc gacgttcgtc gcgccaaatg gctggcatac ccgtacatgc aaaggttgtc
    21901 tgagcacgga ggcttaagaa gtgagtacta aaagatacgg tataaaaccg tagaaagaag
    21961 aagcgatcgt ccactgttcg tgaagacagg tcaaaaatct gataccgaaa aacggtactt
    22021 acatgtagta aaaatatctt cgtcgcagaa gtacacgaca gccgtttcca aagattaaag
    22081 ggctgtacca cccgaaggcg ccacctctca ggctacggtg acattggtat gcaatcaccc
    22141 gaaggcgccc ctctcagatc accggggcat tggtgggtgc agctaatgca ccattacaac
    22201 gttcgtatag tagatcattg atgccacgtt gatcaataca actcccccct gcttaaaagg
    22261 ctaaatatca tattccgctt catcaaaggc aagcctgcgg gttacgacgc caatattaat
    22321 ttaacgcata tatctgaaga agacttcttt gatagtctga tcgtatcgct tcagtcgttg
    22381 acaggatggt agtgttggaa atcttttttt aacccactga aaaatatctt ctgattattt
    22441 ttcacacaca aatctctatg gtccgttcca tacagatccg gttttgtatg ggtaaaaaag
    22501 gttaattatg aaagtaacat ggactgtcac tcctgtgggg tatcagcaca tcgcaaaacg
    22561 ctgtccgtca tgcaatgtaa aaagagactt cacgccgtca ggtgcattca ggattaattc
    22621 acaaaagaaa atactggacg tatggagtat ctataaatgt actcactgcg attacacctg
    22681 gaatatagcg ctgtattccc gccttcctgt aagcaaaata aatcaggaac ttcatcaccg
    22741 gctgatgaca aacgatgaat ccacaatcag gcattttgcc tatgacactg ctgttctgaa
    22801 gcaaaacaat gcaaaactat caggtcaact tgatttccgt attcaggagc gctgtctgac
    22861 cagtataacg aggcaatatc agatatgtgt ccgaatcagg ttaacccgct ctttccaggt
    22921 aagcctgctg tccataatga aaatacaact tatgctgagt tcggcagata tcaggaggcg
    22981 aatagactcc gggcagataa ctggcgttac ggcaaaaatg cttaaatcga gaaagttaag
    23041 gcagacttaa tattgtcttg agataacgga ggaaacattc tatgccagac gcagaattaa
    23101 gttgatacag gcttaataac ttttaacctg cttttataac cgggagaaca gggggcaaaa
    23161 tgccccctgt tcttatacgg aaatctttat tggtaatcat taaataataa ttcaggtcac
    23221 cggccgaaat agttttattt gcgataagat gctgtccact ttagcgaacc gtccaggccg
    23281 gactgaagtc ctcttcttca aataattctg tcagtccact tatctgcttc agacgaagaa
    23341 cttcatccct gtccattccc agctccttgc caatacgttc atctgcccat ccgagacggg
    23401 caaggtctct gacaatatct gacatcgacg ctatctgatg cttccctcgg gcgcggttat
    23461 gcctgatcgt cgaggcaatt cgttcagcct tcccctttcg ttcgggattg atacaggtga
    23521 cgggcaacca gcctttcagg cgttttcctg ctcctgactc gcgtctgccc agcaactgcc
    23581 ggtgaaaacc atccacgacc aggtactgcc ctttctcttc agatacaacg acgggctggg
    23641 taaagccgtc ctcctgcagt gagtgctgca gcaatttttt ctctccggca gccataacat
    23701 tggggttgta atcgttggcc accacttcgc tggctttcac ccacagcacc aggtccacag
    23761 gctcccgggc aaaggggctg agctcatgaa gtgtcaggcg aaaatgattg agggctgcca
    23821 ctttttcgtc atctgaaagc tgctgactga aataccgggt aatgagactg gccacctgtt
    23881 ccctggttac aatatccccc attccttcct cctttgtttc atacgctcca ggtaacgttc
    23941 gtaatgccgg ggcttattag gactgaaaga taaggtccgg caccagaagt catttttaat
    24001 cagtgtcttg catatcctac gccaggaggg aatatccctg ctgcccaggt cattctcctg
    24061 ttcatccgga atatcttccg gataaccgtg cgtctgatac cagcgcaggt ataccgctat
    24121 cttgttccgg taatgctcgg ctgttttttg tggcatgaca tcaagaagaa acatggcata
    24181 gctgcgccag gtatgatgtg ctggtctgga gatgcgtttg cgcagggcaa aataagcgcc
    24241 actttcatta gcataaatgg ccccgctggc cgctccggag acgcgggcac acattcgcgc
    24301 ccaggtctca ggctccagta catgataaag ccacagaccg cggcgctgtt cggggccaaa
    24361 aggttcacag acccgcatat tccgcagggg gacgccggct ctgtacatca ggtcatacag
    24421 cgggttgtaa atggcgcccg tacgggcatg gtaaatccag atgtcccggg ctttccagtc
    24481 atacagagga cacatcgtgt aataaaaccc ctcaggagag gcggtggtcc agggtttgtc
    24541 atcggcataa cgaagctttc gctggctggt aaggcctata aacctgttaa gggactcatc
    24601 tgcacgaacg ccagtcagta tggccactcc acactgattg cccgtgaacc aagtcgaaaa
    24661 tgccgggaca aactcttcaa atgtcatggc gtaacggtaa aaaggaaaat acgtcgtatc
    24721 agtaatggca tctgtcggcg gctgacgcac ccactccaca tcgggctccc agcagaccca
    24781 ttctggctga aactgtgaaa caccatttac cgtcgtcagc gggagagcca cccagaaaaa
    24841 cgtctccgtc acatcactgt agagatcctt cattttctga acatgctcaa tcgtgcactg
    24901 atactgggct tcccagtcaa taaaaaggac agagaaacgc cggtgtttcc tgcgggctat
    24961 tgtggcggcg atatgaaaca gaacggtgga gtcttttcca cctgaaaaag acagacaaac
    25021 ctgagaaaag gtatcaaata tccactccac acggcctgta accgcagaca gcacatcctc
    25081 cccggttctg atcttctgta tttgattacg ttgcataatg acgttatctg acatgagtgt
    25141 ctgaaaacca tctccctgct atgttgaata attaccctgc taagcattag ttcagttgtt
    25201 agtgaaatga caatattaaa atgtgctttc ttaattatat ttgatctgtg ccccgaaaac
    25261 gggaatataa agaatggaaa ccagagtttc cagtatgcca cttaatatat gcacaaggat
    25321 gattccaaac actttaataa ttaattttaa caggtgtatt atcgttaccg tctgaaattg
    25381 taataactat tatatacata agaaattctt aaggatcggt tatgtgtaga agtatttaca
    25441 ggtttagtgt aatttcatct ttaatatttc ctcttgtggt tttcaatgtc tcagcctctc
    25501 cttgtttcag tgataattct gtgacaaaag gcacacaaat gatttcaaag ttaccccgcg
    25561 acaaggattg taatgattca gattcaagtt cacgtaaatc agtaagtgaa aaaatcatag
    25621 agtccatcgc cgagaaacag aagataaatc aagaaattat gaaaatagat cttgaaatag
    25681 agttgttacg aacgaaaaaa gggaacatga ccgcacagga ttatgatagt aaaatgcgtg
    25741 agctgacaaa taaacattcg gctttaaaaa gaaaaattta ataatttact aaacaaaact
    25801 aaatctcctg gttggtggtg ctaatgactc ggtaatctgt aaacacccca ctcaggagtt
    25861 acaaatttat gtccattctt tcttcggcca acaattgtta aaccaatcaa aaaccccaca
    25921 ttgatcgtca caatgaactt gatgttttct tcgctagttg agatgcttaa attatgaaga
    25981 tacacacatt caggagcaca gcaaatgaac gcacaagcac gcggtgcccg ggccgcaagg
    26041 ctttataaaa gggctaagtc aaagctgatt tcactcgacc atttctgtgt tcaaaaagcc
    26101 agagagcata agctgcccgc ctggactggt catctcccgg tgacaaccct gacagggatt
    26161 ctttttgctg cagtgatttt tggctcactg ttatttgtga gcttaggctt atttatattt
    26221 gcacttattc tggttacatc gtggcctgga aaaagaacaa actctgcgga ctcgtggagc
    26281 gataactctt ggggaagctc aatgagagat ggaagcgagg gatttggtct atacactggc
    26341 ccagaaaata gccatatacc aacaagtagg atagataatg aggatgacct atgaaagcac
    26401 tgtaatattt acagtgcttt cacgatttct tatttagcta ttcccgagcc aattttatca
    26461 ccaactttgc caccatgctg tccagctggc tgcactccct tatttaagtt agtgtcaaca
    26521 atgccgccaa ttctaacccc agcccaggaa agcgccccca tccacactgc cggcaacacc
    26581 aggaacatcg tccccataac aaagttcatg atcaggtcat ctgcgctatt ctgaaaaccg
    26641 gccacattcc atcggctatg gctgtccgaa ccatacatga tctccagaag ccagctatcc
    26701 agccagcgcg ccagctccca ccagaacgta agaaaatgca tcccaaacgt cacaaaagtg
    26761 agagtgacta ctgtcttata ttcatacgtc ccgaatacca gcaccagggg gattagtaca
    26821 tacatggcca tcaataaaag tgcctgaacc atcggtaacg cctggcgcat ggcatcaaat
    26881 gcggggaacg ccccaagggc acccacactg gtccccagca ctgaagccat gcgatttaca
    26941 gcattatcta acgtaaaatc ggcattaccg ccataacctg cataagtacg tccattctgt
    27001 gacacagaga gacttgtcgg actgaccaga cgtcgaatta gcgcttccgt gtattcctct
    27061 ttgctgacca ttcccttaaa tgctgccgcc atgcgtgtca tcgtggtggt atttaccgta
    27121 tccagcacac gggatttcag gcctgtcttg ttctgagacc accactcgct acacgttgga
    27181 taccccccct gcccggtatt tgcgtacccg tcatcgcggc tttgcgacca ggggaacgct
    27241 gacctgggca acttcgaatg cagctgcggg taaaaatcct tcaaaaatat tttcgacccc
    27301 agccattcaa tatccctgag tacatcaata tccgtagttc tccccgcatc ctgccgtttc
    27361 cataacgcaa aagcctgtgc ataacagtca ctggtaaaat cctgcaattc ctgagccaga
    27421 gcaggattgg tgatctgcgt atgctgaacg tcaaaacgca cctgccgcag gtctggccgg
    27481 cagggtaaac ttgccacagc cgcctgagtg acgcctttgg aaatcatatg cataaatgcc
    27541 caccacaccg gcgcagatgc agtcatacca ctcattgttg aaaccacact accgtagcct
    27601 gaatccccgg gcttgaccgg tgtccagaaa ccacactgtt tcgcacgggt tgtatcaaac
    27661 gtcagcgttg tcagtgacac tgtctgagtg gggacacagc aggcgataat aacgataaat
    27721 gccccgtaaa tagcatgttc catccgtcgg gccgacagga tacctttatt accctcatca
    27781 tccccttctt cccgtgtttt gatccagata ccaatgattt taaagcccag tggtaatgca
    27841 aaaagtcccg tgcctgtcag aacatcccac aaaccgttat taacaaccca gcccagaatc
    27901 gtcaggatgt actcaagata gctcgatgtc gtcatcttct acctcaacac tgaatattcg
    27961 caaatcgcga cgaaaccaac agaaacgaca gcaatccgca gaagactctg acgcagagcc
    28021 tgagaagagc catgggagtg ataacaacgc catatccccc aaccagtcac gctgtaaagc
    28081 atcagccgcc acagaagcca caacaaccag gtttccttca tccagatccg gaactgggct
    28141 atttcagact gataacgaaa ccctaaatca gccagtgcaa gggacaggca cgtaagcata
    28201 accagcatga acacaagcgt cagaataaat ctcagaaatg aagttgtttt gattaagatc
    28261 ctcagtgtca ttggctgtcc cctggtttac gcgtttcaag ctcactcagc cgggtatcag
    28321 cattagtctg cgattctttt tgaggattgg tgaccgaacg attttcttcg cgcgcaacca
    28381 caaccagcgc ggtatttttt gccacttccc gacgcagttc catctccagc ttaagagagt
    28441 taagctcacg atcgagagct tcaatacggc gatcggcttc agccattgcc tgaggctgat
    28501 cagctgcatt gggttcagac tggccagtcg ttaacatgcg acgcatcgcc agaccggttt
    28561 caatcgtgtc ggacatggcc agttcgccag ccagtctctg aaccaacgca ccggcatcag
    28621 gatcgcgttt cagggcatcg atgacaccac gcgttacctt aaggctgcca cttttaattt
    28681 tatccagatt ggcctgagtc ggagcctcag taccatttac aagctttacc agctgttcca
    28741 gattctcttt ggttgtatcc tcaagcatgg gagcaaaacc ggtaccggca attgtcgtgc
    28801 cctgggcatt atcaatcccg ccgcttccgc attctgtggc atctttacag gtgcgaatac
    28861 tccgatcgcc cagaactttt acgaccgctg ctgcagcttc ttcagagttt ttaaatttct
    28921 ggcatgctga ccccttgcaa ctaccggcgg ataccgtgct gttgctggta acgctcaggt
    28981 tattcatcat gttgtatcct gctttagcca gatcacgcgt tggctgaatg gcaggctggc
    29041 ctttccctcc ggctttcttc ccgcctaccc aggtagcgcc ctccttacct gaagctttgg
    29101 ttctggcctc ttctgcccgc agcgcatccc cgccactggc actgaccgcc tccttgtact
    29161 cttccctcac agctgattct gtccagctgc tcttgtcacc caaagtgtaa tcagccagct
    29221 tgttggccat gctttcacaa ttcagtttcg atttgtcaaa agccagacct gcctgaagta
    29281 caccattggt gatcatttca tacaaacccg gatttgctcg ctgaaggatc atcgccggca
    29341 tacttgagac cgccccggtc gcaccggtga tcacatcccc catcaaatct ttgaaaccat
    29401 tcgtgacgcc attaagctgg tttccgacag tagtctttat atcaaagttg ccacacatca
    29461 aatcactgct cagtccggca tccagcccga tacgtttcat tccgtacatc gtcccgggag
    29521 tggaaatcac cgaaccacca ccaatgctgt aaaacagctt gtcactaacc gcgccattta
    29581 ctgactttcc atatccatca ccactcaacg tgggggcatc cagtaatgca gcacttaacg
    29641 gtcccgaact gacgataccc agcatgagac agacggataa aatggattga gatctcattt
    29701 tcgatactcc acttaattta tgtcggtgct atagagaaat gtttgcccac ggcgtttaca
    29761 gcagctatat ggctgccaga gtgtccaggc gtaattaccg ttttccgcaa tttttcctgt
    29821 atccgggaat acgctgcatg acatagagag cgttggtgat aactgctgcc atttatgatt
    29881 ttgcgtgccg gtattctctt taacaggttc gggaggccag taaccggcag acgggtttcc
    29941 ggtgaggggc ttatagacgt ggatctggtt agttcgggtg ataatgtcag ctacacgctg
    30001 cgcaacgatt gccccggatt tgtagtcatc ctgctgagta acaaagccgc ttcggggata
    30061 gagatttccc catatatttt gtgccgatgt ggagccgatt tcgcgtctgc caggaatgag
    30121 tgcctcagga taaaccgatt caggaacacc agtacgccag gcaagcgtat caagcgtgct
    30181 aagaaaatag ggtaccagtg gtgtggcggc gctgttgcat gagtaaccgg ggatttggcc
    30241 gccaataatc gatgttgaag gatggccaat ggcatctgca tatttaaatc gcacattact
    30301 cttacgggta cccgggaatt tctgttcctg gtttccgcca ccggcagcaa gcccggataa
    30361 cgcccccgtt acagcattct ctacccctcc ggccgtctga ctcactaatg acatttcggt
    30421 ccacggattt ccaccagacg cctgataagt cgaaacaaca gcttccggaa taaagtgatg
    30481 cacttttatc gaggttttta ctgtacaacc gaaaggggta cacatcagcc agtagcagat
    30541 accgctgatt ctccagctga tacacgacgg agaaatactg ctggccacaa tcgaggcagt
    30601 gttcaacgca gcctgaacct ccatgccgcc ggtgataagc atgactgaca gtaacgctcg
    30661 cttcagacga agagatttca ttgattctct cccctgcgca gcgccactgc ccgggatata
    30721 tcaacagtcc cgtaaaccac gtcacggttg tcaaaaacca ccgccggata tttcagtaaa
    30781 ccaagctgcc atgcttcaat cattcccctg taatgttcga taagcgcttt ttgccgtctc
    30841 ttccagtcag gagaattcag cagagaatga gcctgtctga cagcctgttc aggatcagaa
    30901 gaaagctctc caaattgttg ctgcagccag cgttcgctgg catcgagata aacaacccgg
    30961 atagccggtg ttacaccgac cggaggatgc ccctggtcgg tgtaaacaac gatttgcgca
    31021 cttgcagaaa aggagctgat taatatcagc gaagagagga ttcgtttcat gccacgctcc
    31081 tgacgataac tatccggata gcgtgcgaaa aacgcagagg taatgcagta ataaactctg
    31141 ttttgctttt taataattcc ccgcttcaga atatgtggaa gcggaatatg aaacgccggc
    31201 ttttacgccg gcgagtgtac ctgtctacct gataagccac agcgccagat aaagggcatc
    31261 tgcggcatcg gcaacatcga tgtaccatcg gggattaacg taactttcct ccgcaggtaa
    31321 tgctgtcttt ccgcttaccg taattaatat atccagcttt tttccgcgta aattctcaag
    31381 atggattgcc aggcaggcac gatgcccgat acgctgtgga tgacaaaccc cacgataagt
    31441 attgccaaga gctccctgaa tatgagaagt cagacgactc atatcctcat catgttcctt
    31501 gcggatccac gctttaccct gcggaggcaa acccagcagc gcatcaggcg gaatacgatg
    31561 cgattcatct tcaccgagaa ttaaccattg ctcatgcttt aacaggctca taatcccccc
    31621 attgaaatac catcattgag caaaagagat ccttcacgtc cagcctcccc ggacaaccac
    31681 tctgatgaca taacaatgac tcctctgata ttggtaaaac tggtcacagg gcttggccat
    31741 tgcccgtggc tcaggaattg ttttttcagg ccgctttttg tggacaaaaa ccccgtgcct
    31801 catccagcct gcgggccacc cggatcgctg cctcaagctc actgcactga tactctcgca
    31861 tcagccgctg acgttccgct ttttcctctt tttcagtcat ccccagggcg agatacagac
    31921 tgggaggcac aacccggaac agtgcctcaa cctgctttga taaaacgacg ccctcggtat
    31981 aacagttttt gagcttactg gctgatcgca aaataacttt ttgctcctcg ctgagggttt
    32041 tgaaacgggc aatctgctcc acctcatcgg gaggcataac caggcacaac caccattcag
    32101 ccatgttcag cattttctgc gcaatatcag gaaaatcctc gaggttctgt gtcgccagcc
    32161 acagccatgc ccccagtttt cgccacattt tcacaacctt ggtcatatag ggcgacaaca
    32221 aaggattcgt cgtggaaata tgggcttcat caaatacggc cacaatatcc cgggctgttc
    32281 cctggtcacg ttcggcgata ttgttaatcg tgttaattaa agagaccatc gccagcgcca
    32341 tttgtgcacc atagccttca cgtgccagat gacctaaatc gatcagtgtg acatcagcct
    32401 ctggccatgg tgttcccgga cggttgaata actctccctc aaatccctga gtgaacatgg
    32461 ccatggcttc tgccatctca gcagcacgat cgcgacggga ctgattccgc ataggctcgc
    32521 catttgcacc aatggaatta tcacgtgaga tattccacag ggcagcctgt aaatcctcag
    32581 ccagcatctg atgtccgtcc tgatatgttt tctccgccgc catcatgata gcttcacgaa
    32641 taagaccgcg gtcagcccgg gtaagacgtt cctcctcccg cttctcgcca ccggtgatca
    32701 tcatccgggc tgcaatttcc atttcgccaa gaatgtcacg ctcttcactt tcatcttctg
    32761 cgctgtcggt attggctggc tccagctcag gtagagcttc ctcagaaacc acgtttttct
    32821 ttggatctac tcgcattaag gaatgagcat cagcaaacat cggtaaagaa ataccgcagc
    32881 caggtttgat actcagtaca tttacgctca gtcccagccc ccggaaatac tccgccagca
    32941 aaccaaaact gttgccggct tcggcaataa agaggcgtgg acgatgaacg gccattaact
    33001 gtgataacgc actacataag gtggctgatt tacccgcccc ggtcggacca aaaagcaaca
    33061 ggtgagcatt ctgcgttctg tccagactat ttaagggatc aaaagacaac agttctccgc
    33121 cacggttaaa aaaactaaac ccggggtgtc cggttccctg gctgcgaccg gtcacgggaa
    33181 gcaatccagc cagatgctga acccaggtca ggcgggtata ccagtttttt ttatccagtt
    33241 gcgggttaaa acacatagga agcgctcgca aatagtcatt caggggcgcc acttcgtatt
    33301 caggtttcgt gggctggagc cccgcagtca gcaatgtagc ggtaagttgc tgtatttttt
    33361 attcagctca ctgacatcag gtgcacgcat caaaaaagtt atcgatgcac gataaagttt
    33421 gtgacgcatg cccagcaaac tcttcacctg ctccacatca ctacgggtcc gcctggattc
    33481 cgtgttctgc cctattgcat ttttacccag cgtgtcaaac ccggcttcca gcgtgtcctg
    33541 agcctgcgcc acaatagtga gcgataccat tgtgccctca ggcaataaat ccatcagagt
    33601 attaatattg tcgccacgct taacctcccc cgtcagatga ccgggtcccg gagggcgacg
    33661 taatgtttca acaggaacgg cacgatgcgc cacattatca aaccaccaca caccatttcg
    33721 ggtatcagaa cgtggagggt taaaccacaa cgtctcagtg aaatcattgc caagaggcaa
    33781 tgaatcaggt gcatcatcat aataacgagc ctcccggtaa agcgtatctt tgtctatcca
    33841 gtcgggctca ggattgaagt gacgtaacaa ccatcgatgt atctgctcgc cattctgtcg
    33901 gacactcaga acgccggctg cagataaggc tgaagtcagg cgctcacaaa cctggttgag
    33961 agcggcaacc ggcgaatcat ctttgtaatt cgctggcagg tatcgatata ccaccatcct
    34021 gacggaacga ttttgtcccc gccagggaac cccggtgaca agtgaatcag tgaacaaacc
    34081 ttccggccgg gtgatatttc gcagatgctg ttctgtttca gccagccagg ccttcgtaaa
    34141 tgccgtcctc tgagcatgcg gtttgatgta actggctaac cgattcatat aggcactgaa
    34201 gtcagtttca tcctgacaaa aaactgtact acccatgggt tagaatcaaa ctcttcaagg
    34261 ctgtcctgaa gtgcatcttc aaccgaatcc cttatttctt ccagacgggc agctgtgcgc
    34321 ccctctgatg ccactggcga tatactgtat accgcaccga cagactggcc atcgtcaagc
    34381 agcagacatt gctcgcgact caggtactcg gcccagggca aaaaatcaat aatggacgga
    34441 cgggtttcgt ataaacggga ttcatcagcg tgactcatca tgcccgggcg tttcagtggg
    34501 tcacggccat gaacagcaaa gtcactttcc ggtaactcgt caggctcccg gggagaagat
    34561 gacttcagcc tgtttttgtt aaacaaagaa aaactgacca tcacagtgcc tccgtccgtt
    34621 caccaggaag cgcatactgg gtttgagcat aaaaaggaaa gacagtgctg tagccaggaa
    34681 caggcgtatt tccattagcc aagtgcggaa atatgtacat caccatatcc ggattaggta
    34741 accgggggaa aatctggctc agctcattct cctgagtacg gctgtagctt tcatcaatac
    34801 gccctgaagc cagtgtttcc tgagacgaaa gactccgcct gagagtctcc cgccctttga
    34861 caacggcgtg agatgtcgga gcattcccct gccagagctc catcattgaa ctgtctcccg
    34921 gaggcaataa ttcatctttg ctggatgagc atccaccaag cgcgacactg aacatgcccg
    34981 ctataaaaaa taaaacggga gttattttca ctgtacgtga agtgattttc tgattatcag
    35041 tcaagaccat aatggcctcc tgttccgggc aagctgaagt catatcgaac cttacgacca
    35101 tggtcttcat aatcaacggc cagttgacga gtaatatgaa tagcgacatt tgcaccaggt
    35161 gggacataca ccgcatcaaa cgtctgtccg taacgttgtt taacccagtc ggtaacttct
    35221 ttaaatcccc ctcccagcgt ctgccccagt accgcctgcc ccgcattgcc ggttaaggct
    35281 gatgtcaccc caccattcac attgttctga gtggtatatt gattttgtgt taacgcatca
    35341 cctgcggagc ttcccatccc cagtaacgca accgttggca gataagttga agcattagat
    35401 ttgcgctcac cactgataca gggaattccg ttgttatctg atatccagcc aatgctgccc
    35461 ctgtctccgg cgttgtcatt attgttgccc tgagtgtttg ctacgggtct gggaagtgtt
    35521 cttatacgtc catcggaaaa aacaaacgtg atcgaatgta tcgttcctct gacacacgaa
    35581 agcaccatat cccctgtagc agtcccggaa acaatagccc cctcaacatc gggcaattcg
    35641 ataccgtttg cagttaggtt atccttaccg atcaggactt taaatggata aggatcggtg
    35701 actttgtcat taattggtat acgaccaatt aatgccgtca tcgccttact gcctaccagg
    35761 gttgagttct caggcaacgt ataaacaggc cgtgtatcgg actctgcacc gtttccgtcc
    35821 agttcctgct tgtttttaac aacgcgatcg tactcagctc gctgacgact gacggggtta
    35881 tcatccagaa aagaggtggg aaaggtgaat ttatcattat cactctggct ttgaccctct
    35941 gtctttttag catcctgagg agatatccag atcacctccc cctgagttgc agaggatgca
    36001 ttctctggat ccagtccaag gccaaccggg aaatcggttc ctgaagacga acctgtcgac
    36061 accatgtcag tgttttgtcc ctgggatttc agtgttccgg tcaggtcatt gagcttctcc
    36121 agtaggaacg ttttctgttt ttcaagagcc tcgttcgttt cctgttttgc ggcatttaca
    36181 gcatttgata tctggagtcc taccgatgaa ttctcaccct tgagcttatt attttcagaa
    36241 atgagtgcct tattttgctc atccagcaca gcctggcggg cccggacatc acgcaacgct
    36301 ccaataagtg tacgtagcgt gtctgctgac gtatccccct caatacccag tgctttcaaa
    36361 tcatcctggc tcaactcagt caatgcatta gtggttttag cgggttcagg ttcagtagta
    36421 tcttttaaac cacaggcttt aacgccaata aaacaaacca ccacgatcaa tactggaagt
    36481 aaaaccttca tcaggccatt ggctttaatt tgcatgctgt tccccttttt ttactgccgg
    36541 caatactgca ggttcagcaa taaaggcatt ctcagggcgc cctctgatca caagataaag
    36601 agttgttgta tcttcaggcg taccagccgc cccaagccaa cgatgctgga aagtcgcact
    36661 gacaaacgat cctgataaag tccgggcatc aagtatcact ttggaggaag aacgattccg
    36721 gattttcagt gcaacaacat tcagttcctg aataccccat gcccctattg gcgaaacaac
    36781 tacattctca gacggatata aagttgtgag tctcgaggga aggcgtaaat ttaccggatg
    36841 aattccgggt acagcttcaa cagtgcgtag aggggcatac agactttgtg cagcataacg
    36901 agtcaacacc actggcaatg gagcactgta caccggcgtt tttctgacag tctgattttt
    36961 atcttctgta tccaaagagg cgactggcaa cgaagaaccc gtttccattc ctttttcgct
    37021 caccgataac acttctcccg aataaaccag gcgaacaggc tcaagcgcct tattgtcatt
    37081 tttggcagca atatccagta atataatctc gcccgattca acatcctgca gttgaagtcg
    37141 ggtctgttca aaaggttcgc tggcctgtaa ataaaccgta ccaccgctgc tttgaaccct
    37201 cagtttacct ttgagcattg ccggaaaacc tacacgaacg ttgcggtcga caaagacaat
    37261 tcgctcatgg ttaacagaaa gtggaataag cagagggatc cgttcccatt tcatcagctc
    37321 cacagcctgt gctgatgaaa accataaaag gagaattatc ggccaccatt tacacttaaa
    37381 attaaggact ttaaacatcg ccattaaaac atcccctttt tctctggctc agggaccact
    37441 gcagcttcaa gtcgttgtgg gacgccttta tagcaatcaa gcgccagacc aaaagcattg
    37501 cgctccggat caccttccca gcggacaata tgcagggggt atctggccag tgcccgtttt
    37561 acaggttctg tgtgatagta ttcatcgact accaaatcca gactgacctc ccaactgtca
    37621 tcgctctcaa tgatgacact ttcaggtttg taaccacgtt tggggatctc ataaacgacg
    37681 cgaacgcgat caagcaactc acctttttga ctccgtagct cagcatcctt attcaaaaaa
    37741 tcctggcatg atggcgtaag ataaggactc aactgggcaa ttttcatcgg atagtctttt
    37801 tctccgtcct tcggccaggc attaatttgc tgaaaaatat aaaaggcaaa gctgtagacc
    37861 gtactcggag ggacctccca ccatttacgc gtactcccgc tgcgtaaatc tggcgggtta
    37921 tgtattgtca ggtcactggg cgcccgcatc catcctgtaa taaccagaat caataagaga
    37981 agcagaactc cacacgctaa tctcagggtc aaaatatgct gatcgcgatc cttcagagca
    38041 tggcgaaatc ggctcatatt ccccccttgc gtacaggctt actcctgcgt aatgaccagc
    38101 gtcgatcatg acggaccaga actttgctcc cgataccaat atggctcagt attttttgaa
    38161 tccggaggta gaggtaaaaa ttgggtttat tacgtttaaa acgaaccaga aagcgtccac
    38221 cgataaaaat aaatatcagt ggagtgataa gagtacaggt tggaataatt ggccagccga
    38281 tccccgttac aagcatcatt atcagagaca aaattaagcc tgacacggca ccaataagtg
    38341 ctgcatagcc cagttctggt gttgtaaacc ctctgaaaac taccgtttcg gcattcagcc
    38401 tgtccggtaa aaactcgatt gttttcatga ggccacctca attcaaaatc ttcgcggctt
    38461 cagtacacaa ccagacaatg acaacgagaa tggctatacc gacaacgaca atcgcaacaa
    38521 atttacccca ttctgcttta ccggagcgta tttctgagaa tgtcgccaga atagcgccgg
    38581 aaaccatata aaatccgaca gcacaaatga ttagccccat caggacgaga aacccagaaa
    38641 acagaagctt gatcgtttgc atcatgtcac ccccaccgcc cccaccggga atattgaccg
    38701 taggtaatcc tgcatgagag gagaagctcg ccaccagtaa cagcagaatc aaaagacagg
    38761 gaagtggtac tcttaaccca tgtttactct ttgaaagcat catgttttcc ttttaaccaa
    38821 acaaattatt cagctggcga acatccatac tgaaaacaca accaaaatgg ccgtactgat
    38881 aaaaaaatgg agagcatttt gctcagtgac ttttcctgcc cgccatccac gaaacacaac
    38941 taataccgac caggcaaacc acaaaaaaag aacgctcaga acaaaaccca gaacaaactt
    39001 attaagtacc gtagggtcga tacctgaccc tgctttaaaa gcgtttgcct gttcagaatt
    39061 catagccatc agggctgctc cttcctgtat tgtccaacaa gagaaccttt gtctcttggc
    39121 tgtgcccggg aaggctccag ataagtttca atcccctgct tcatggtttt caaatcacgt
    39181 gttgcccgct catagtcgaa gaagaaacgc ccgtcagaat tgtcctgtac cgctacaatt
    39241 ttcgcgcgtt caagcgcaga ctggacctgg tccagctgcc tgagagcgag ggccagttca
    39301 tccttttcag ctgcactgac catctctggc agagagaaca aactgaggac gagtaaaaac
    39361 ccttaaaggt ctggaagata attgacatct ttgcattacc acctctgttt catggagtac
    39421 gtctgtcaca acagagtggc gaaatcaggg aggagatgca gcaggaaact ctttatgctt
    39481 ttttgaaatt tatatcctcc cggggggctg gtgccagccc cccagagaag acaataagtc
    39541 agcggttgac cctggccggt cacagatatt ttttgaatgt agatgtcact acagtaaccg
    39601 ccagtcccag taacaatgcc ccgggcagaa gtaacagatt tggataaatc gacgcaggcc
    39661 atgacaagta aagtaagcaa gggagataaa cagccggttt aacaaaccgt ttggcatggt
    39721 gatacagaaa actcgactca taacccgccc cgtaacgtct caggtcacga cgacacaacc
    39781 cgtctataac agcgacgatg ataaccagaa caaataacgg gatggataaa acaagaatta
    39841 ataccctgac ggcaaaaacg acggtgacat aaaccagcgc aagcagataa tcgcttaaca
    39901 ctgataataa ccaggcctgc acttgtccca gaaaaaaaac aacagagtca gaactgctta
    39961 atgtctccct ttgttctttc tgaatccagg tgagtaatcc actgtccaca aatgcccatt
    40021 ggtaagctga cgaaatccag cccatcgtag ttactgatgg tgaagaaaaa ataaggcttt
    40081 gagtaaaatc tgctgataaa tagccaagtt ctttattcat aacggactgg gaatgcaaag
    40141 ctccctgatc tgaccagaaa aaaaacattc ctgcccattc aataaaaaca ccagccatcc
    40201 aggataccag cagaaaagcc aaaagcctga ctggccagat ccacaaaaca agggtcagca
    40261 aacctggtgg cttgcgcggt ggtggagaac tttgagagct gtttttttct gtactcatag
    40321 cgcatccacc agattatctc cggggagcac actccctgac caccaggtgt ctcccgttcg
    40381 gtagtgttta cgcattgtag tgacaatact ctgcaggttt accggcatca tttcatcatc
    40441 aacggatgcc ggcagcggca tacgaatctt ccataatcgc cctccttcca gcagtgcaaa
    40501 agcctgccct ttaggtaaat tcattacttc tgcaggagat aaaagaggaa cacgtgtact
    40561 gcttactctg tcctgaacgt tggatgtgaa atcactcccc tgatccggat tggatatatc
    40621 tgtcacaccg gaaaccagtg tttttgtata aatttcaact tcaggtaatt gcgttgtcag
    40681 caactcagct gtcgttttct ctctcacacg aagcataatc atattattga aattgcctgt
    40741 gacctgggca gctttagctg cattaccaat tttggcctca atatctgacc aggtctgggt
    40801 ataggctgta acttcaatac ctgccccacc gcctttattt atcatcggaa tgaattcttc
    40861 tcccattaac tcattgaatt catcacagtg aagactgatg ggtaaccgct ggctactccc
    40921 ttcgggcata tcatcagaca gtccgaactt ataaatatat ccagctgttg aaaccagatc
    40981 ggcaaacata ctgttaccta ccgcagaagc aacttcagaa tctgaaagag catcaagacc
    41041 gacgtaaaca acaccgcctt tccgtataat ttcctgccag tctattaatg ggcgcggatc
    41101 attcatatca ctgtagtcag gagataatag tgccgcagtt ttgcctgtgg tcagtttttc
    41161 cagaagaggt aacaatgaag cgactatttt atcgaaatat gttcgatcat aacgtacagc
    41221 gctacgcaac ccatccagta cgggatcgta tatttttttg ccctgctcac tggataatgc
    41281 cacttcaatg gccataaccc gaatagcatt aacctgtccc tgcatcgtac gtggtaaatc
    41341 atcctcagtc aggatcccca tctggttttg aaccatcagc cacaactccg gagcctgttg
    41401 agtcagtaac ttctcggcat aggtctcata aagctctgca atatttgtta cgtaccggag
    41461 gataagcgaa taatcaggtc gcaaaccaag aacgacaaga gcacgagcga tgatattgac
    41521 aaagcgccat gcaaactctt taaacgcagc gttatttcct tctcccccaa gctgcccggc
    41581 aacacgtgag gccacttcag atacgcgtcc aaaacggccg actgcattat aacgggcact
    41641 gatatctggc cagccaagat gaaagatata aaactcgtcg ctacgcccag ctcgcctcgt
    41701 ctcagcccac attcgtttca acagatcagc atcacctttg gggtcaaaaa cgatagtgac
    41761 atttcctctg cgaatatcct gcgtaattaa cagttctgcc agacgggtct taccaactcg
    41821 tgtcgttcct aatacaagaa gatgtccaac gcgctcggta agactcatca aaacattatc
    41881 ttcctccatc tcgacaccat gtatcgccga attaccacca acagggggta atgggcgtac
    41941 cggattaaaa aatgaatctc gtcttgtcag gctacataac ccagggaatg tatactcata
    42001 ccgtcgttca aactgacgag ccagggagta aaaaactgac ggtttcagaa agggagcaac
    42061 ttccggccgt ttcgtctcaa gcaaacgttg ggtatgcttt tgctcccaca taaagccttt
    42121 ccccagaaac aaaaaatgtc ggcttaccgg tatggattca ctggacatct gataccgggg
    42181 taaccgacgg atattgcgtc gatagcgcaa gatgcgcaaa ccctgacgag ttctgattgt
    42241 tgtgaaaatg gcaaaaccgg ctgcagtcac ataactgacc tgtggtgcta acgccatcga
    42301 ccatggtgcg acaaccagaa caaaagtggc agccccgcca gccgcagctg aatagagttc
    42361 tactgctggc ctcaataacg cctccatgac ataacggtta ctcatagctc ctcctttcac
    42421 actgttatgt aacaaccggc tgcccggcaa ctgactttgt tactggccgg tggtaccagc
    42481 actggcgccc cgccagcaaa tcaagtagtc gctgcccgct gatcagttgt attgttcgcc
    42541 agcactgcag gtaattaacg ctcttactac ccgtccgccc tgtatgaata aaaaatccac
    42601 aacattgctc ccgggtaatc agctctccga actcacgtat atgctgcgga gaaatagtcc
    42661 gtctgtagcg ttttgcctga attaaccagc gctttccgtc aataaaaacc tgcccgtcaa
    42721 gtccgccatc gctactgtag gtctggtttc tcacaaccag gagtccctgc ctctcaaacg
    42781 ccaacaacag cagctcttca aacacatacg ggttaatttt tcgaagatac tttagacggg
    42841 ccccgtctga atcaagcgct gtcagacggc acagcacacg ctccgcgttc tgtcggtagc
    42901 gccggtgccg gcggtcgcgt gcggacggca ttttcttacg ccatatggca ggaatgagaa
    42961 gacagaaaag taaaagaaga atggcagtga tcatgagagc accctactgg gccagaccgg
    43021 tggcggtaat caacaccggg tagtggttga gatgcaaacg acgcgctatt tcgcttgccg
    43081 atgccggtag cagaatgaca tcaggtatga tttgctgaag ttccgacaac gcgtccttat
    43141 cgctgacatt caccaccaga cctgtagcat gaagtcgctt aagctcatca cgccgcatcg
    43201 tcaaccactc gcgtgaaagc gaatcatccc caacaagaaa gaccggtgtc atcccgttca
    43261 gatttaactc acgggcttcc actttccctg cacgcatttc cggtgtggtt acgggcagca
    43321 tatcacttac atccgcaggg gctgcggtta cagacgcgcc cgtggcgttc agtgacctcg
    43381 gcggagtgaa ctcgttgttc ttattattga tggcatcaaa aagcggcgct gttggttctc
    43441 cgccaagatc agcaatcaca ttgagtgctg ccatcgatga tgttgtcagc aaaatactga
    43501 ccattaatgt cctgaaaaaa aaacagacag aataaagttt cactgacggg actccctggg
    43561 ttcaacccat tgcaattcac ggttgtagtg tgagaaatgg cgctgtgatg gcgatatctg
    43621 tgcgatctga agttcggagt acgttactgg cgcgtttaaa tccagtgttg ccagcttgcg
    43681 tttcacgatg gacttataga ttcgtgctgg ttttccacct gcaggatggt gataacaccc
    43741 cgcggcctgt atccagcttc ccggattgtt gtcataacag gatttaagaa tacgggcggc
    43801 aacccgaagg ttggtatatg gatccagcgc ttcgtagtaa ctgctgaaat aagttccatt
    43861 ccagcccagg ttaacctgcg cgatcccaac atcaatccgc tttaacggat agcgacgcat
    43921 gaacgacaac attgcgtcat acgcttcctg gcgggagtta taccgatacc ctttcccggc
    43981 aacattgagt gtccacggcc acggtcgctc tccatgtggt agttttcggg atgtttctgc
    44041 aagagaaact gaatacaggg cttcagcggg tacgccgact tcagttgcca caaggtggta
    44101 acccggggga attgtttgca gaccgcgtcc cttttctacc gcagctgcac taccaacacc
    44161 cccgataaga aggatcagaa cagggacgct gtatctggct gctgtcagaa tgctgcgatt
    44221 tgccatccgg agactccctg ctgaagcata accggcatat atccctgacc atacttcagc
    44281 cagttgccgt tatcgtggtt gagggttatc tgccggctac gaactttatc gaccggaata
    44341 tgatgtgcaa gcgcccactg gcgaatggtg tcatcactgc cgccactgtc gaccaggtaa
    44401 atatcaaccg gacggttatc tgccagaacc gcacttactc tggcatcgca cggtacacag
    44461 ttgcgcttca caaataacgc cagtcttccc tgtgtatcat gggcaatacc gctggcattg
    44521 cccatgttta cggagagagt attgggataa aggcgtttcc aggcagcatc cacttcccgc
    44581 tgaaaggcca gctccttttc accccgggca tactcttcct tcacccacat ttcagcaaaa
    44641 cgccggcgtt cgcttgccga accggcctcc agccccagtg ccatcaacgg gtcaatgcca
    44701 ggtgactgaa atgctctggg acctttaagt acctgttgat actgctgcca ttctttttcg
    44761 ctgagtcccc atgccgttcc tgacgtttgc gtccttcctt ctgtagtcgt attttgctgc
    44821 tggggtgcgc ttacactgcg acccgtactc actgatgcaa gagcaggcag acttacgata
    44881 acagccagca tgactgacgc agtccactgc cggaggcaat ttaacgttga tttcatcggt
    44941 ttcatccaat atttctccct gattcagagc gttaaacgtt gtacctgccc gttaacctga
    45001 aactcagcct ggttaccgct gatgttcacc agcacccagc ctgacagact ctctcctggg
    45061 cttaccatgc gcagctgtgt ccagccactg ttccccgccg gcagaataac ggcgtaagcc
    45121 tgccctcccc tgcgttcaat actcaccaat gtgaaaggcg gcttaatgac ccgtggtttt
    45181 gacgactttt ttgcggcaga ctgtccacct ccgggagacg gggtcgcctt cgtggcagtc
    45241 gccacagtgc gtttgctcca cgtgtctttc caagacgcga gggtatctat acgcgaagtc
    45301 tgctcagtca gcgctttatg aacagcgtcg agcttcatgc ccgtttcatc ctctcgggca
    45361 acagccctgg cagtcgccgc ctgagtctct ttaacctctg taaccagcga agaaagttgc
    45421 tgctcaaacg cggtgagccg cagctcctgc tcactcagcc tgagctgcca tttttctccc
    45481 tgcagtttcg gaacgaattg ttgctgcctg tcttctatgg cctgcatacg atcgggaagt
    45541 gtctgcagct gtccgctgcg gaacgccgca tcaagggtgg taagctgtat ctgctgctga
    45601 cgtactgtca gccagaggaa taagacagca cccagtaata agcagtacac cagaacggat
    45661 gacactttaa atatgaggga acggcggtct gaagaaggat gccacagacg actcctcttt
    45721 ccccccagtc ggtatgcagc tgactgtgct gaagtatctg gtgtaacagt gatatcagac
    45781 gtatcaatag ccggttcggc aggttcagtg aggtgagcgg ataaaggtaa atcattatct
    45841 gacggaatat cgacagaaga tgccgtcgtt gtcgtcatgg tataagtcct ccggaaaacg
    45901 gttttcgcca tgactatgca aaaacagttc agcggatacg acagacaaat caaaactcaa
    45961 aagtgaaaat aagggatcca gattagcgtc aggaacacaa actggcagcc tcttgaagat
    46021 atgtgcgata tggagataaa gcgttgacgg ggctctttgc cgccccacac cccgcagact
    46081 gcgtcgccac cattccccgt cagcgggcaa tgccggcaac gcagtgatga tctccctgta
    46141 agtcatcact tcaaccctgc gataggcgcc tgccagttca ttaagccatg cctgcaagcg
    46201 accagttcct gtgaaggcga agttttaagc ctaaccccct gtcatggtta gttcacccag
    46261 tacgtcagtt cttcagcaac atgccagttg acgccatcct tataagttgt tgccgcattc
    46321 gcagttcctg ataaagcgat aagaacagag aaatacaccc gtttttattt cataaattga
    46381 ttaatcagga aatgcttgga aattcaccct taggtttatc gaatatcata gcaggaataa
    46441 ccgccccatt atccaatgcc tgcatttgtc gcgctgagaa agtgaaataa cgtaatcgga
    46501 taggaggata tttttctact ttatcttttg tatacccgcc aagagtgata ctggttatac
    46561 gccgcaattg attatatgcc tgctgaacct gctcatcctg ccagtctagt gcctgatata
    46621 ccctgaggag cccgatcggc tcacccgaaa taagggggcg atagcgcaga cacaacccca
    46681 cactttgagg tttacgcccc tgctgccaga agaaaattaa ctcaaccgga tccactgact
    46741 gaattgactg cagacggcat aacagagagg gggtctgcac agcccagtcg cgctggccgt
    46801 cagccatatc taccggatag gaagagtttc ccagcagcca gttaacatcc acatcaaacc
    46861 atgtcgacaa ttgctgcagc aaaggtttgt tcaggagatc aagcgtccta tcctgactcg
    46921 ctaatacact ggcccttatt ccccaggaag ccagtagctg tgcctgttcg ataacattca
    46981 atccatgagc atccaacagc agacagaatc gctcataaag cgtggacgtt ctgtccgcta
    47041 tactctctct cgcctctgct acaatgccat caatacacat accaaacata gcggcccggg
    47101 atatacccag atgctctgcg cacctgtcca gaaatacccg agtttccggc cgtattctta
    47161 ctgaaaactg tgcactgggt gcagatactg atgcccccgt ttcaagtggt atttcaccag
    47221 atcgcattaa tgcaattagc gcgttataag ttgcattcat actgacaacc ttaaatattt
    47281 tcctggatac aaaagagtga aattcaactc atttcatttt ttcagttctg cgttccaatg
    47341 taatagaaag attaatctca tttattcatc aggtataatg gaatatttcg gtcgatttgt
    47401 tctaatgtat gaagaagatt aaaaccatgt cgacgtgaaa tcgactgaaa aatataattc
    47461 taaaaaaata tttattccgc caaccgatga atgactacca ttatcccctc ctcagaaggc
    47521 aattgaataa gccgccactc ctgtagcagc atttgcgcaa aaatagcaac acgttcccag
    47581 cgcggaagcg taatgggagc gatccgacag cgatatcccg tcctgtgtga aagaacctga
    47641 caggtaagcg ctacctgagc tggccgcata agatgtgaac ggaaaaaaac gggacgcacc
    47701 ggccgcgcca cgagggctgt ctccagtgcc tgaacaaatg cctggtgata gcgtcgggcc
    47761 tggcggcggt tcatcgcccc cacccgatca agcaaggcaa gatgtacagc ccagtattga
    47821 cggcgacgat acgttacact gaatacagca aaccctttcc agggcgtgaa cagcgcaatt
    47881 aacgtaaaac acgggcaata cagcgccaga cagaacatca caaacaaagc gtactccacc
    47941 cctctgtcct tttttgcaga aaatgaacgg cagcagcgta cccccttaac gacgagaata
    48001 aatcacgtaa atgactatcc gtaacggcaa atttatcagg cagcactcaa aagaggatgg
    48061 atcattaccc gctcatgctt gccttccggc aaatccccgg ggcgaggcac acgctctccc
    48121 cgctgagccg ctttagccag cgttcgtagc aacagaacac ctgcagcctc cagcgcactc
    48181 tccctcgatg ccgctgacac tgaaagattg tcaaaatcgg gtaggtgaac acgaaaacca
    48241 caacagccat ctgatccttc attaacggat tcaatacagg caggataagg gacaaaatag
    48301 ggagcaatct tttgtgtttg tcttcggcga gcgtcaagtt tactgacaag ctggtatgct
    48361 ctgagatggg tataacgttt gagcatattc agggaacggt ggccggaaat agccgccact
    48421 tccataacgt tgagtgttcc cagttcaaac agtcggctaa ttgcttcatg acgcagatcg
    48481 tgaaaatgga gatcgacgat attcaggcgc tgcagagcca ccctccaggc gcttttaaaa
    48541 ccagatgatg aatagtgaaa aacattaccg ctaagtgcga ccgtcattcc ctgtagcaaa
    48601 tgacgcgctt tgcgggataa gggaacatct cgcgaactgc cgttttttgt cattggcaaa
    48661 tgggcaacgc catgctgcag gtcgatatgt tcccatcgaa gtgacaagat ctctccttgt
    48721 ctcattgctg tttcaatggc gaggtgaaat atggcgtgaa gcgctggatt ctgttcctgg
    48781 aagtagcggg ataagcgccg ttcctcttgt gatgttaaac gtcgatctcg tcctcctgat
    48841 atttttggct tacgaaccat ttcaacgggg ttagttctgc atgttcccca ctctacgctg
    48901 gccagattat acagtgatga cagtaaagcg agttcgagcc ggactgtgtt tcctgaaata
    48961 caccggccgg tacgcgtatt cacctgagac aaccgatcat cgcggtaaga cgcaatatcc
    49021 actgtcgtga tttcatccat catcttctct gccaaaggat gtcgctgaat gaccctaaca
    49081 cgatagaatt cctgctgatg cccccgttta tgcacagaca cagtggcgta gtatttatca
    49141 agggctttcg acagagacat tttttttatg cgttgtgggc gagacattgc agataccttt
    49201 gcgagaagaa ttgaggtttt tctccaccgt aacgaaaaac tctaataccc tcaatcctcg
    49261 taaggacata cgtgccaatc cggtatctgg gtgtcgggtc aaaacagatt cactacacag
    49321 ctctacgaca tagggcagaa tgtgaatgcg cagtacatag gcattcatgc ttattgcagt
    49381 tggacacatc tattttctgc tcctctaggg gggcgccaga gggtctacaa tgtagggaac
    49441 gcttggtatg tcacgaatac cccttacgga ggttttcaaa caggatcgac tgtttccgta
    49501 acatgcctga atctgccggg tgcagggctt taattcataa tccggcgcca ggtaagttca
    49561 aacaggttac cgaaatagta cctccggatt cgtagttccc ccatctgtag ttagagatat
    49621 accagccgtt ggaaccgttc gagtgtatct cctgaaaccc gcccagaggt gaaccattga
    49681 gatatgtcca tgcgcagtag gcatgcactc caatatactg atttcttaca tttttaccga
    49741 cgttaaatgt ctgaatatta aagttcagcc gataagaact ccaaataccg gattggcacg
    49801 aaagtgtggc acctgctgta tcacgactta ttgcaccatt tacaggacaa gcagtgctgg
    49861 caacattaat cttatccagc gttaaaatac cgcctgccga tacgtcccca tccgagcgaa
    49921 tcttcccacc gcgaatttca ccaccggtat aaaacccctt gttattcagg atccgtaacc
    49981 agtcgttatc tgacatatac aaaccaccac catgggtctc atccatccaa cctttaccac
    50041 tgcgggttac aatccatccc cctgtgcttc gaatatctcc ccccgcagtg atcggaccat
    50101 tactgaccag acttacgcca aaattcccat tctggccagc cacattactg gccgtaacag
    50161 tgccgacgct attcaggtta tttcctccca tatcaatagc tgtgtgcatc ttgttcaaat
    50221 ccggacgacc attgacctga aaacgataca gcctgtcccc gtcttcacgc gcccctgaca
    50281 ggtcatccgt gctcaacatg acggccagat gacctcttcc ggtgctggtc ccgtaggagg
    50341 acagcggaat tcgccagctg cgcatcgctc ccaccgccgt ttgcccgtct tcaacgtatc
    50401 ctccgaagcc ggcggtaatg tctttcgaga tctggcttag cgctgtaaaa ggcatagcat
    50461 gaccaccgcg gctgaccacc atgccctgaa gcaactcctg attttgctga ttccggacta
    50521 tcatcgcctg atactgctgg ccataactgt tggtctcact aaagctcgcc ggcagcaaac
    50581 ctgtattctt cagcatttga gttgttacca ctgcaggtgt agttgtggtc gctgatgcca
    50641 gcaccgtcgg ataaaacttt ccaacatagg atgagactgc ctgagtgaaa cgattggttt
    50701 gcatggccac aacctgccac tcacgggatt tcagataatc tcccatatat ctggcagcca
    50761 acgaggccat caccagaaca atgagtaacc cggctcccac gctcatcgcc acaaagccgc
    50821 catcatgttt ttgttttttc atctcagtat ccactcaggc tggtacaacc tatccacaat
    50881 gactggtatg caccctgcac acagccaggg gcccagaacc ccacaacgca gaaagtcccg
    50941 atggactatc cactgccaca acataaaacc actcagccca aaaaacgccg cctgcagtgc
    51001 atccgttacc cccatccagc ctaccagggc acaaaccagc cagacatctc ccacgccaag
    51061 ctgaggtcgc cgtcggttaa caccgtgaca aatagacccc atcaccaccg ccatcgccgc
    51121 agtttccata aagcgaagtt ccggctcccg atgaaaagcg agacagaaca ataatccgct
    51181 acataaacag gctgcggtaa acggtcgggg caaccaaccg ctggtcgcat ccatcactcc
    51241 cagttgcagc aaaaaactgc acataaacag cattccgata cgtgtcatcc agacctgagg
    51301 tgccataagt atcagcaaac ccgttaccgc aaacagccag atacccacca cgacggcaca
    51361 atggcgtgag atatccacct ccgctgcggc cagataaaga cgtaccggcc ttaaaagtac
    51421 cgccccgaaa atggcgcacc cgataaaagc aggtatggca tacacaggag gaaaaatggt
    51481 accgataaga gagactgtca ttgagccccc gtttgccgct gataaatttt ccagatccgg
    51541 tttgcataac gctcccgtgt ttcatgccgg tcaggccgga aacctgcgtt ataagagccc
    51601 aggcagttcc agctcacccc acagacctga aaatgtttcg caaggatcca cgttccaatc
    51661 tgcacattca ggcagggttt gttcagcaaa tcatttttgt ccctgatgac ccccatcgag
    51721 acaagacggg gaatatgcgt agaattcacc atcatcagtc cataatccgt gcttttgatt
    51781 ttccccgttt ttttgtcccg gttatcattt gttgcatgcg gatcaagatt actttcacca
    51841 atggccatgg acttaatcag cagcggggag acatggtatt tcgccgcagc ggcatcaaag
    51901 cagaatgcct gtacccacag cggcacactg cacagcgtca tgaataaagc cagtcgggaa
    51961 aaatatccac acatcccgcc tcctcagccg ttgtagttaa aaaccagcgt attggtaccg
    52021 gtccggccat tatctgcagt gcattcactg ctcgcgattt ctgccgttac tttcgcatcg
    52081 gtgtggttat tgccgtttat tttaataccg gacgtgccgc ctgaacggct catacctgtt
    52141 gaaatggata cgcaggcaga ttgcggaact ttgtttgtgg taatggtgaa cccattatta
    52201 aatccggttc cccccgctgt atccggcgcc accacaatct ggccacccca tgagttccac
    52261 agtgtcgcgg aaccggaagc agggtctcca ctgaccgtca tcccttttgc cgccccggcc
    52321 tgaattaacg tgtcggtcat tttagcgcca ctggtaaaag cataaccgtc aacgcctttc
    52381 atcatgccaa tggtgttcgt ggccagggtc tgatagtttg tcagctccgt acccgcatcc
    52441 tttttacccc acatcgacca gaccgccgcg gctatcaccc caatgatcac cagaataaac
    52501 agtgcagtgg caccggcatc tgccgacatt ccccggtcag gcctgttgca tggatttaat
    52561 gttgatacct cattcatcat ctttccctct gtttcatttt tcattgaatt gcttaacatc
    52621 agtactgccc catactctcg gtcatcgaag tcgcctcaat caccgccacg accacaacgc
    52681 caataagcgc aaataacatc accattgaga acagcatcac ggctattccc cgtcggttaa
    52741 ctcgcttcac agtttcctcg agccattcct gcccaaagcg cgcaatcatc tgagcggccc
    52801 cgtccccact gaccatagag agatagttca cggcttcttt tgaggggaag gcataaccac
    52861 attcacgcag cgccatacca aaagaggccc cctcctccac ttcctccatc actgcgttca
    52921 gacgtacaac gagccaggga gaagcaaagc ggtggataac ctgcagcgca gtcagggttc
    52981 tgaccccagc gcacagcaga gcccccatat tgatgagaaa aatcgcgccc tgaatatcac
    53041 tgtaaaccgc ccagggtaca tgtctgtccg caagacgacg cagacggtcc ggacgtatcc
    53101 agttcgacag ggaccacctg gtccatgcga ccaacagtgc cagcccggcc cccatcacca
    53161 cgccatgctc agtaaaaaaa atcagcaggc cgttaaggct tcccagcact ccggtccatg
    53221 tctgcggatc tgacatcccg gccagcgttg gaataagctg cgtctgaata acacccagcg
    53281 tgccaccgag catcgcaatg caacctaggg gataaacggc catcctcatg atcgcctgtc
    53341 ggatacgccg ccggcagtca atcaggattt ccgcctctgc gagcgcctca ggtaaccgac
    53401 cactgaacat acccgcgctg atgagcgccg cctcctccgc cggaacccag tttgcaagag
    53461 catgctcaag ggagttatcc ccgctgttgt cagtgagtgc cgcccggcag tcgtccacca
    53521 gaaaaccgaa accatgagtc cgctgcccaa aatcggtata catattgctg atttgctcca
    53581 gcgcctctaa caacttcacg ccatttctca tctgcaacga cagcatgcgg taaaaacgca
    53641 gacggtatcc ggacgtaaaa aaacgtcgcg ccagcgcccg gcgaagacgg tataaaggac
    53701 tcatgcaacc tccttcagcg cagccatccc ggcagcaacg ccttctttaa tggcttcctc
    53761 aacaccctgc ttcatcccct ctctgacgct ggctgcaatt accatggcaa ggcgttcaat
    53821 cagcgacgta tcaatgtcac tcgacgatgc aacctgatca cttaccacct gcatcacctc
    53881 atcctcatca agaggaataa tcaaatcggc atccagtggg tcaaccagcc cgtcattcag
    53941 tttgtgaagc agatgaatgc gacgggtaat cccccccatt tcacggatcc agtaagcttt
    54001 tgcagcttcc ttaccctgct gtaataacag cctgaaaagc gtagaatccg tgcgaaccac
    54061 ctccgccacc acactgcgtc cggccacccc cttaccgact gttgccacct gtttgccacc
    54121 gataatgacc gccttccggc aggtcgggca cccctcctca tttctgaaat gaagattttc
    54181 gggctgacaa accccctcca ctgaacagta cttttccaga tattcacgtt cttcggtggt
    54241 gagatgttct tttttaaccg accagggaat acggcactcg ggacacagca cctgaaccag
    54301 acgctggctg ataagcccga ccaacaactg ggcatctgcc accagtccgg catttgcacc
    54361 catcgttatc attcgctcag ggatggaaaa ggccgagttt gaatgcaggg tactcagcac
    54421 cagatggccg gtctgggcgg caaaaatccc ggccagaatg gagataaggt cacgaagttc
    54481 accaggtaaa atggcatccg gatcgagacg taacgctgag gtcagcaccc gctgccaggc
    54541 cagcctgact tccgcctcat cggctttgtc acagataata ggagtctgta ttgccccaac
    54601 gatgcgtccc tccggcggat cttcaaccgt cagtaggcgc tttttatacc gggtacgctt
    54661 cagatagagg tcgctgcagg cacgcagggt ggtggatttc ccggctccgg tcgggccgga
    54721 caaaataatc atcccttctg gcaggcgcaa agtgcgcttt atcaggcgga tttgtttcgg
    54781 cagaaaaccg agtttttcga gcgtgggaac cacatcacca tcatccggga tcacgcgcat
    54841 cacaaagtga aggccatctg ctgtcggggt gtggctgtaa cgggcgccaa ataaccccac
    54901 ctttcgcaga aactttgcag ccacacgacc atcctgtttt cggccggcgt agaactgggg
    54961 ttcggtcaca tcacacatgg aaaggatgat agtggccgcc tgtgcttttc cgtcttcttc
    55021 agccagttcc gaaacggtct ccagttcacc gtgcacacgc atctcgatgc gcgtcagtcc
    55081 tggccgggtg gtaccgtgaa tatcagacgc gccgatatct ttcgcgacca taaaatagtt
    55141 gagaacatcg ccctgacggc tgctgacctc ttttttgatg tcctcaaggc gaagtccttt
    55201 ttctcccttc tctgactgct ggcgagccat ttcactgtac ctgagcaact ctgaacgggt
    55261 taccagcctc attgtgacac cggggttttc ctccatcaga gacattacct tctgctgcac
    55321 cgccacgtcg gtacgccgct ggctgtcaac cagcagctcg aggatcgtgg tgtccgggtt
    55381 gtggtaaagc agaaccgcat cgttgtgttc agacataatt cgtccctaaa acgtcagttg
    55441 ctgaccgtca ctgagcgtga cggatgagag cgttattgcc ttcaccttca gtgatgtccc
    55501 cggaatcaca cttcccgtct gtaccaggct ttgtcggcca tccggaaatg acagcgtggc
    55561 ctgcagggcg ttaccacggc cactcacttc cagaaccgta attcgtccag ttgcaggggg
    55621 ggtgtgaaca ggagtcgcat tcatctctgc cggcattccc ataacgaacg gactggtcgt
    55681 gggcacattg ccaacatccc ccggagtttg tgcagaagtc agctctttta gcagtcgggc
    55741 tgcctgaacc tttgcctcca ggagcaggtt tttcccctgc agcgcctcca gctgtccggc
    55801 cgtcacgctg ttaccgggga aaatggggac tgtatctgat aagtctgcag aggatatcga
    55861 tgccgctgct tccgtagcgg gttcactggc aggcattgca gaaatcacct ctgcggaagg
    55921 aggaactgcg agtgtgggct gcgaaaatgc ccctgcgctg aacgccatca ggagaacacc
    55981 actgatgaaa acactatttt ttggcataag cataaagatg cccctcaatc tgataagtaa
    56041 actgtccctg aggactcagg gtgtaaccca cagaactcag ccgtaccccc tgcatatcga
    56101 gtccctgtaa aatccactca ggcatgtgtt tatcagtgat actgaacgtg tattcatgcc
    56161 agtcctgtat cggctggggc gcatcgttgc cggcaccatc accgggcatc gcgggaggag
    56221 ttttcacttc ggacagagaa aaactgacct ggcgtgactg aaaccacgac accgcctgca
    56281 tcaactgggt ccccgcatcc ggcgcagtct catcctgtaa tgtgaatttc gcccatggaa
    56341 taaacaccac accttcgttg ccacctgaaa caaggttgaa tactggtgta cgcttaaaaa
    56401 cctgcttcac ccgctccgca aagcctgccg ccgtcccacc gggctgccgc tggtacaccg
    56461 tctccagccc ctcagcactg caacgaatcc gttcgagacg ccaacggtca agacttacag
    56521 gaactgcggc gcgccagcgc tgacagcggt tcagaaagtg tctggccaca ggcatatctg
    56581 cccagggatg tggaaggtaa acaggttcag gtgttttttt aaacacgtcc tgcaccggtg
    56641 ccggtaactc ctgcacgaca ggcgcgaccg gaggttcggg taacctgctc caccagactg
    56701 caccaccaag cagggcagcc actgacagca ctcccgcccc gtatggccgc aaaggattag
    56761 acacgcccgc cactctggca aaccggagct gtgccgaaga tacctgaccg accaaagtgt
    56821 tccaggacaa ggggaattcc ggtgatgaag gtatcgtcca tccgtcctca ggagcagggt
    56881 tgaaggacag aaagagctct ctcgcccgga tgatttgatc tggagttccg atcacatctg
    56941 ccatcggaga tggcatcccc ttcaccgtgg ccagaaagac ctgtctgcca tcatcaagct
    57001 ggtatacccc atagccattg ggtgtacact gctggctgaa cagcgccgcc agggaataca
    57061 gcttctggtg acgccagccg gcctcaattt gccccaacgc ggtcaaccgg ctcttgccct
    57121 gcttcaccgt caacacaacg ttcagaacac cccgacgttg tacaggggct cgacgtaccg
    57181 acttttgctt ttcttcccag cgaagccccg ctacccagtt ctggcgctgc cagcgcagaa
    57241 cctgcgtacg gggcttgccg gataacggaa tatctgccat atcagccacc gttccccatc
    57301 agctccgggg tgataataat gaccagcgta ctacgagaat catcgccgtc ccgaccgcca
    57361 cccagcagga aattacccgg ggtaaaggtg ccgtttttgg tcatccgggt attactctga
    57421 tcaaaacctg tcagcaccag tgcctgccct gcgcgaaggt tagttttctg gctgagcgag
    57481 cggagtttgg tgtacggcat ctcgatgtac gagttgccgt ctttggacgt gaagttacga
    57541 atagtcggtg ggtcagacag gttgaatgcc acctgcagtt gcacgtcacc accatcctga
    57601 atcagtggca gtaacgtcat gttgaagccg gtagtcatca tacccggcgt cagggatgtg
    57661 ggcacccaca tcggttgtgg tagtagttga actctgtgcc acgtagaccg tctggtcggc
    57721 catctgaata ggtacaggtg taaggttcgt ggtcacgcta ccctgcgagg tgaccacact
    57781 gacatcgccc tgctctgaca gagctttaat cagcagactg gagccggcaa atttagccgc
    57841 acttccggtt gctgaatcca gaatagatac cgacgccgac gttgcgttgg tgatatcacc
    57901 acttacatta ttgagtgaag caccggctga gcgcagggac ttgtaaacga tattccagtc
    57961 cagtcccagt tgttccttac gtgaagtact gacactcagt acctgaacgt tgagcctgac
    58021 ctggcggttc atctgacggt tctgctgctc aacatacgcc gcgatactgt tgagtacaga
    58081 aggggtatcc gttaccgtca gagtgccggt actggccgac agccagaaac gtcccttttg
    58141 cggagtcacc atggtttcca gcgtcttttt catatcgtca tagacattac ggctctggtc
    58201 gaccgtcgtc tgctgcgaag agcttgaatc ccctgacacc gaactgtttg tactgccacc
    58261 actggttccc atactgcttg ttgaacccga ggtaacactg gcattactgg taatattggt
    58321 attcagaaat gtgaactgga aagtacgcgt ctccaggagt gaaaacagaa ttgccccgtt
    58381 atccatacgc ggggtgaggc ctgtcctggc cgaaatcatg tccagcagac cggacagttt
    58441 gccctgccag cgcaggccac tcagtaccac tggtgtggcg gtcgcgcgtg ccgaatcaac
    58501 agcgccgccc agttgatcca acggaattct tccattgtta tccggtgtgg cttcggggtt
    58561 gcctttaccg gcaggtattc agaacgggga tgtggtctac ctcaattagg aaaatcttta
    58621 atgataagaa aatattacaa agtcaggctc cgtattgcag ctacagccat cgtcgccgca
    58681 ctttcgctgc cggcctgtac ttttcaggaa atggacagga tgtcgcgcag tgcgcaagcc
    58741 agcggtgata ttgcccgcgg tcatgtcagt gagcagatgc gatcctcaca gggagcgctg
    58801 gtctggacgg ataaaccctg ggtcaatctc aaacccgtcc cgacagtgtc acggggtatc
    58861 cctcaggaaa acttccctga ctgtcagata acgctggcac gggacggact gactctgccg
    58921 gaagttggag agcgaatcac tgcgctttgc ggcgtcaggg taattttttc acccgatgcg
    58981 ctggcagcag gtcagtcgtc cggtaccacg cgggcactga atggtccatt accgataccg
    59041 gataaccaga ccagttgccc ctgcgtcacc gtgccagtta atgccgaccc acctgactgt
    59101 tcacgcagcg catccaccag acccgggact tcaggcatcc agacccacag ccggttagcc
    59161 acaatgacat gtcggatacg gctgtcagga gccaccggca gggccagttc tgacaaggcg
    59221 accgttccgt ccgtcagggt atgtcggtag cgccagtcat taattcccgc agccagcaat
    59281 aacatttgcc gggccaacag atacgaactc cccgactgct gcgctttgac aacctcgctt
    59341 cgctgagtgg tctggacatg tccgacgaca agcagaaata ctgtgcccag agcgacaatg
    59401 aaccagccca tagctacgac cggtcagccg gtttatccgc aactgaaacc aggcactgca
    59461 ggcgggaagc ttcagcaaat aagggcttgt cagctttctt ataaaggtca aacacctgaa
    59521 ccagcgccgt ctcaaagttg cctttaaata ccaacggtgc gtcaatgcgg taatccgtag
    59581 gggtctgcca gataaccacc cagtgtcctc cccccggaca gtcagctctt ccggcccagt
    59641 cagtcaggga ctctttgagc gtgctgccga caaccgcctt ccactcaggg ccactggcca
    59701 ctgcagctac aggcgtaccg gttaacggtt ttgttgtcgt ggccagtacc gtagccgtcg
    59761 ccggatttac agccttaacg gttgagggag acggtgtttt agcctgagcc ttctctccca
    59821 caggcgccgg tgaatgagac gccgacaggg tggtcccggt caggtttttt cctgtgaacg
    59881 gattgcgcgg agccggagaa gagacttgtt tcacgggggg ggcagaggac actcctgacg
    59941 ttaccggtgt cccaccaggt ctcagggcag ggacaggaag tgactgactg accggtttca
    60001 gttcagtacc tttcttcgcc gccaggtgct ggccggcgat cacgggttca gctttattcc
    60061 ccggcagaac gccggtataa ggattgcggg tggtttccgg ggaggaggtt cttgcggcgc
    60121 cggtcacggc gggtgtgaca gatgtcagtg ctttagtttt agcctgtacc cgatatgcat
    60181 cacgcaatac gaaacagacc tcccggttga cttcatccac ggacattcgc caggcaggac
    60241 cggcgaccac ctgcagtgcc tcactgagtc gcatcggccc aattttgcgc tgaacggccg
    60301 gtaacggccg gttcagcagc tcagaaaagt cagcaccata atgtccgcac agggaataac
    60361 cagactgaaa cagcaggtag cgaaatccgt caccgactga gttaaccagt tgccctggca
    60421 tagtaatatc gatgagctgg ttgagcggtt cccgctgcgc atccgcactt ttaatactga
    60481 ccagcgtgta acgcccgctg cgagtcacct ccggtgatcg ctggtaaata tcagagaaga
    60541 cggaaggctg ctgactctgt gcaaatgcgc tgtcgcgagc ggtttgggtg gaggtctgct
    60601 gtgcacaccc ggcaatcacc agcggcaggc tcaggcagaa aagcgcttgt gtgttcatga
    60661 aaaatcccgt ggatgaccgt aattacggca atcgtgcgga gatttggctt agcgctcaat
    60721 aaacaactct ttatgcaaaa atgaaaaaaa aagccagcat cattgctggc attctgcata
    60781 catgaattta ctcaatgtaa agaaggtcga taaccctcga tgttaatgac gcggttgttc
    60841 cagcgtctcg cggttcagac ctgtggattt aatcaccact tccaggctga caccattgtc
    60901 aagcaaggca tacgcagttt ccagtaacgt cttctgctca cgctcaaggc tggcctgacg
    60961 ctcctgctga atactctgct gaataccctg ctggatacct tcttctttca gttgctgtgc
    61021 aattgtgccc atgatcaact ccttatactc cgggatctca ccggccagtt cgtataaaaa
    61081 cggcgtgata ctctcgcttg tcatgccatt gtagataata taacacagga cggcttccac
    61141 ctgcgcccgg gtatttccgg ctagtcaaat cagctgtaca acatcacgca gcagcgatgc
    61201 agcgtcgcga tgccggatat cccgctgaac cagctccagt aatgccatac gacggtgaga
    61261 ctgcaggtcg cagtcctcca tgacgctgac atccaccagg ggccacggtc gggagtaaac
    61321 ctcccgcgcc agcgccggta catcgaaaca gtccatccag tctgtactgt atgggtaagg
    61381 ccgcaccatt ccctgataaa acagtaacgg caccaccacc ggcagtgtcc cgttaccctt
    61441 tttcaggtgg gcatccatca ctgccatcga gtaacgcatc atccgccagg ccatcatccg
    61501 gtctgcggtc gactggtgtt ccacaagaca gtatatgtac ccggcgtgac cttctgcggt
    61561 ttccaccgaa tacagtacat ccgagtgcag ttcgcgaagc ttctgatcca caaaactacc
    61621 cggttcaagc ttcagcgtat cgagacgaac ctgcgcgcgg atatctgcgg gaagatgaac
    61681 tgccaggaaa tccctcgcag tgtccggctc acgcagaaaa agcttaaaca ggccatcgtg
    61741 cccgggccgg ttatgaccct tttcgttatc cattccgtat ccttcatatg ttcaaaacat
    61801 aatgccttcc acaggaaggc attattcagc gacaattttc aggacagcac ataaagcgca
    61861 tgtctggcca cactgtgccc gaacggcgcg aacgggatat catcgtcgaa gtccattggc
    61921 ggctcatttg caggatgctg ttgaggtggc atcccgctgt gagaaggcgc tgctggttgc
    61981 tgaggctgac cccagccgcc ctgttgctgc ccacttcccg cactatttcg tccgcccaac
    62041 atctgcatcg tacctgactg gctgacgacc acttctgtag tgtacttttc aacgccagac
    62101 tgatccgtcc atttgcgggt gcgtaatgca ccttcgatgt atacctggga gcccttacgc
    62161 agatactcac tggcaatttc ggccagcttg ccgtaaagaa ccaccctgtg ccattcagtg
    62221 cgctcttttt tgtcaccggt ctgtttatct gtccaggtat ctgaggttgc cagactgagg
    62281 tttaccacgg caccgccatt tggcatataa cgcacctcag gatcctgtcc cagatttccc
    62341 accagaataa ctttgtttac acctttagaa gccatgagta tctctcctta agcctgttca
    62401 cgctgtgacc atgtgccctg tttgagcgca tgttctgcct gagactgagt ggaaaagtac
    62461 tcaacagatt cacgggatac cggcccttct tcattttgcg tgccgatgta atatccggca
    62521 ccactgcgaa ggacctgtaa aggtaaggat aacccggcaa attttgctgc cagtaaacca
    62581 gtagaagatg atggtgaagt taacattgat tgttcctttt acattaagtc aggaacacac
    62641 cttcctgacg gaaagtgtgt ttccatcagg aagggttaag gagaactcag aacgaatctt
    62701 ccgcgtactg cttctgcgcg ggctggctct gggccggagg agtggaatcc ggtttttctg
    62761 ccttatagac aattgcaccg tcaattttta tccagtcaac ccggatgagg cgagtcttca
    62821 ggctgacacg gttttcaccg gcatgatcac cttttgcaag ggtaaaaata tcggatttga
    62881 tcccactgag aacaaaaccg atcattactt ttttgtcctc atcacaggac ttctggcagc
    62941 ggttaattaa actcgttgcg tctttgcctg cgactgtgac atcaaagcgg gtgtagtctg
    63001 cattatctgt cggaccacta agggcattca gcgtacaaca ggtaaactta ctgttaccgt
    63061 tgacaacctg acgtacattc gtgatatagc ccagaccgtt gatattcaga ttaaagtagt
    63121 tagtttcttt agacatgatg tttctccatg gaatgaaatc gttgcggaga aaacatctac
    63181 cctggcggga tgatggattc ccgcagggat atcaacgctg gcaaaacgct gatgatcaat
    63241 aagtttaaaa tatcttcatc gcaaaatgct gcgacagccg tttccaaaga ttaaagggct
    63301 gtaccacccg aaggcgtcac ctctcaggct acgatgacat tggtgtgcaa tcacccgaag
    63361 gcgtccctct cagattgccg gaacattggt gttgtgatca cccgaaggcg ctcctctcag
    63421 atcactggaa cattggtggt cgctaagcga cataaggttc gcgaccattt ttagaacatt
    63481 agttaaccct gtcaacccgt taaatatttt ttgtctcgcc ataaaaaaat ggccctcgct
    63541 aacgcgaagg ccatttctca accaaactgt tgcaccagaa catgaggtaa aatcaaatct
    63601 ccgaagccgg tcaatggctc agcgcggttt tcacggagtg attgcgcttt gaggacggat
    63661 ccttcgagta aagatcgttc tcctgactgg agttgcgaaa ggcatgcaaa gctttcgaac
    63721 cgttccacag ccatgggtgc tgctcttatc aaagcgatat aaggctacca gaattcagcg
    63781 aaagaaaaca acccgttagt attctaggct ggcgaaggtt ttcgtctgcg tcctctgggg
    63841 cccttgttac cattgttcac gatacctttg cactccggat atttcaggca gccccagaac
    63901 aagccactct ttccattgcg ctgcaacgtc ttgccgccac atacaggaca gggtggtgaa
    63961 ggtggcgcct gcatagtcag tggctgtgat ctcccctgag cgaccagctg actgacccac
    64021 tgactttgct ttgccataaa gtcatccagg ctcaccctgc ctgcagctac ctcatccagc
    64081 atctgttccc acagtgccgt aagtccggga ttcgttaacg ttcctggcaa cacatccacc
    64141 aggttacgtc caagaggtgt tgacttaagc gtctttttct cacgcaccag aaacccacgc
    64201 ttcaacagcg tgtcgattat cccggcccgt gttgcttcag ttcctatccc cgcattctct
    64261 ttgagcacct ttttcagcgc ggcgtcagta acgaacgccg ccgcattggt catcgcggca
    64321 ataagagttc catcgttgta cggagcaggc ggttttgtct gcagtacctt ctgctcagcg
    64381 ccctgcacct ggcagacctg gcccgcctgc atggcgggca gtgtggtttc accagtatta
    64441 tcctcatcat cttcggacat tttgccaaac agagatttcc agccgggttt caccaaaacg
    64501 ttaccacggg tacggaaaag ctgaccgcca atattaaatg tggcctcagt cacgtcaatt
    64561 tccatctggg gcaggaactg ggccaggtag tgcaacctga ccagctgata gacattgcgc
    64621 tcagcatcac tgagtttgct cagatcacca gtatgttttg tcggaatgat accgtgatga
    64681 gcggtaattt ttttatcatt ccagatacgt gacacaaact gagtgtccag actcgcgacc
    64741 accggctgta gcgccggatc agttccgacc acagcagaca gtacctgtgg gatttcttct
    64801 cgcatcgata acggcagata accacagtca gttctgggat aggtcgtcag tttgtgggtt
    64861 tcatataact tctgggcgat atcaagtacc gtctgggctg gcatccccca gtgtcgggag
    64921 caggcctgtt gtagtgtgct caggctgaaa gccagcggcg ctgattgttt tttcctctcg
    64981 atctggcaat tgattatcgc agccgttggc gtttgccgac acaactgaac cacctgtgcc
    65041 gctacccccg actggataca acgcttctct tcatcgcaat actgtgcagc cggtacccat
    65101 ttggatggaa acaacacgcc attcacggcc atcgtggcaa taacttcgaa gtacggtttc
    65161 gacacgaagt tatcaatttc acgatcacgc tttaccacta tcgccagcgt tggcgtttgt
    65221 acccggccaa ctgaaagtac gttaccgata cccgcttcac gccccaggag tgtaaacagg
    65281 cgagtcagat tcataccgat cagccagtca gccctgctcc tgcccacgcc agcataataa
    65341 agcgattcag ttcgggaaga cggccacaaa tcagctaacg ctgaccggat actggcatca
    65401 tccagagctg acatccacaa ccggaataca cgcccctgaa acttgcagta atccagcaac
    65461 tcacgggcga ttacttcacc ttcccggtca gcatccgtgg caattaccac ctcatctacc
    65521 tgtttaagca gacggttaat taccgcgaat tgggcttttg catccgcttt gactaccagt
    65581 ttccactgct gtggtaataa aggaagcaca tcggtgcgcc atggcttacc atactgttcg
    65641 ccatatactt ccggttcagc tgtctccagc agatggccgc gagcccaggt gactgtaact
    65701 cccggaccat tcaggaatcc ttcgcctctt tgagtggcgc caagaaactt cgcaatatct
    65761 ctgccctgag aaggtttttc acacaacacc agacgcatga taacactcct ttcagaaaac
    65821 cagcctttct gcgggcttaa ccatcgatgc gtttcgaatc agcgacaaat aaagaagggt
    65881 cagccacaat ctgttcttct aacggttctt acagtaattg cacaatatct gctttgtctg
    65941 cttttgcatt tgccgccagt agaagttcaa tactctcctt actgactggg ggtgaaaaag
    66001 aggaacgttt ttgccccaac aaaacagctt cgtcaatttc acctgcgttc ctgattgcct
    66061 catggtactg agcattctgt aatgcaaaat cgcggcggtt cacctgaaaa aaacgatatt
    66121 tctgagcggc accatagatc tgacggatta gatggcctcc ccgtcgaagg ctacggtgaa
    66181 gctcttgccg ggagataaaa ccataatgcg cggcctgaaa agcctgcatt gccagttggt
    66241 caaagccaac cagaagccat acacatcgat aacccagagg tgtacgactg aaaactccaa
    66301 tatttaaagg agaagcacag ttgacctcag aaatagtcgc ctgagggggt agcattgaca
    66361 ttgacttctt gagtgcaaca agctcttcat tcatcttgac cgaagcggac tgcaaaagtg
    66421 tctcaagctc aagcatcttc tgatcagcat acggattgtc attaaatgaa tcggcattaa
    66481 tacgacctgc tttttgaatg aaggctggca tactgaaaat aagactctga cgacgctctt
    66541 ttttcttccc ctccttttcc ccctcttctt ccggaggacg cccctgccac aaatttattg
    66601 cataatcagt attcaacgct atgttcagcg ccgaacgtaa agcacccgct tttctggaca
    66661 ctgatacctg ttctttctca ctcatcacca acccctcacc atcgaataaa acgtatttag
    66721 tgagggcgat aattagtcag gtaagccaga agtcacaatg caaaattctt aatccaaaga
    66781 ttaggttttc aataagtggt cgttttgtac tatgcagtct cgggcagtaa agctcatttt
    66841 ttaaccaaca agccttctgg cagacccaaa tacactcact ggttattttt tataccatgc
    66901 tgccactggc agcaaagctc attttttaac caatacattt tctggcagac ccaaatacag
    66961 tctctggtca ttttttatac cgtgttgcca ctggcaacaa agctcacttt ttaaccaata
    67021 tactttctgg cagacctaaa tacagtctct ggtcattttt tataccatgc tgccactggc
    67081 agcaaagctc attttttaac caatacactt tctggcagac ctaaatacag tctctggtca
    67141 ttttttatac cgtgttgcca ctggcagcaa agctcatttt ttaaccaaca cactttctgg
    67201 cagacccaaa tacagtttct ggtcattttt tgtaccatgc tgccactggc agcaaagtat
    67261 attttttaac cagtcattga gaggaattca ttctctgacg aatttgctcc accatcgcct
    67321 tcacgacttc ctgacctgca gggacatcag cttcagctga gcatgtcggg attttcccgg
    67381 cagcggatgg ctcagctggc acgacagatc tgctcttaac aggctgagtg acagcaggtt
    67441 ccagacgata cagtcctgcc ctcgcttgcc tgagtgtagt cagcaagtag cccaccggat
    67501 tgctgatacg tttctggtgc cagccattca ccacgctgag ggcgatctgt tcagcctgaa
    67561 ctggtgattt ctgtgcaagc tgattcaact gttgagccag catgggttgt tcactttccg
    67621 gcaggatgga ctgcagacca tcaggccaca cgaacccctc gggtattccg gcaaccgcat
    67681 ttttgccact ctggggagat acgtacgttt ttttaatcac actttgtgtg aaagaacgta
    67741 cgttattgca gtccggttgc cggactctgt cgtaactgtc tgatttcagg ctgagtctgc
    67801 tatccggact cggtgatttc tcccccctct cactactggg tctgtttacc ggactaagtg
    67861 atttatgctc attttttatg ctattcagac tgagtccggt acccggattt tgatgagtgc
    67921 gggcaacatc acccaccttg gacgggcggg tcagacgttc cgcaatttcc gtcatccgcg
    67981 aatgcctgtg acgcatcatc ggatcatcaa gtatcccgtt cagtacatga aaggccgtgt
    68041 cgctgacctc tctgtatttg tgctggcagg ctttacccac catatccagc catcccgggt
    68101 caaacatctc tgcatccttc gcactgactg gttcatcatg ctgggcgtaa atatttcccc
    68161 gtacccggcc cccggtatca cgcacccgct tgcacaaact caaccagccc gttagtcgaa
    68221 gcatggtcag cgcacggctc accgtatcgc gtgacgcctg tccggaaccg ggggaagaaa
    68281 gcagtttctg aagttcatca tatgagggga agatggcgcc gtcgttctgc agggcatact
    68341 gccgtatcat tatccagcac attttatcca gaggagaaag gcgcatatcc aggattagcg
    68401 cccgcgggta ggcgtcgtga atattacctg taaacagcag cccgttacgc tcctgccccg
    68461 acgaccccgg cgtaccgtca agccgtgcct gcatcttcga caaggtgtag tcaatgatat
    68521 catctgcagg caaacggtga acggatgaac cgggttcttc catcacctga gccggagttt
    68581 gcatcgttct ttctgttgtt atcgatgcgt ctctcatcgt ttcagttccc ggttataggt
    68641 ctggtgagac ataaataacc agcttttacc tgcatcctta ctcagcagac gccagcgtaa
    68701 tcccagatca atcttgagat aacctgtctg tcctatctgg ctgtagactc gctttccctg
    68761 ctggtacagg gaaagcagtg tacgcgcctt tgacgtgaca gctttactca catttctcgg
    68821 gtcagtacgg taaaactgaa aggagggtgc cagtgaatcc atcaggctac ctcccccgta
    68881 caccagtttt tgattaatcc ccagatcacc gtgagactga catcagcctc ttccgcaata
    68941 agcatcatag tttcaagaga gttaagactt tctatatcgc tgatattggc ctcatgccag
    69001 agacgccata tcttcgcttc acactcctca tcaggtgact ggcaacgtcc ctgacgtgtc
    69061 tggatcccct cgagccgccg tttagaactg acatctgaag cattcagacc aaagaagatc
    69121 cccatcatct ctattgatgc accaagagca atagcacgat caattcgttc gctacgcttt
    69181 tgctcacgat tggcctggtc cagcattcgt tttagatttt catgatgtat tgctacattt
    69241 aaaacagaaa cagggctgcc tgacagataa tgcagttctt ccatcgtcag acttctgagg
    69301 agacgcattt cttcaggttt caaccccagc gcctcacatc gccgaatatt tccacctctc
    69361 agttccataa ccagattgaa caaaagactg ttggcaccct gtgcaagtga aaaagtcata
    69421 tcgcctcctg aacgtgaaca ctttcattat ccaagacaat taattgatta caggcccctg
    69481 gagcgagaat aaacgccaga acgttaacca ttggatacct cctgaagcga atgctcctca
    69541 ctgcgatagt ccatagccgg ataaatctca gcctgcctac cagctgtcca tgcagcctgc
    69601 ctcacttttt tggcgttacg acacccttcc ggctgccgta ctttcgcagg ggtcagattg
    69661 cgctgctgct gtgttaacca gcggtcgagt agaacttttt ctgatgtttc aggttcaaat
    69721 gactccagaa ccgtccatac tccggccacc cagtacaaac ggtattcatc catacggcga
    69781 cggatagtgg aaagtttcag taacggatgt gcgcacgcgg tatggagata atgttcggca
    69841 tcacgcttca actgacggga gacaacgcca aacagataac ccgccaccgc cggacgttca
    69901 ccaagcccgt aaaatgttac gctgcgacgc ttcttatgat cactgttctg ataccagccg
    69961 taatagctgc gacagcccgc ggtcatgcaa accactgtaa ccagagcatt cagccaaccc
    70021 ggaaccgaaa gagcattact ggggatattc ctgcaggtct cacttgttat ttctcccggt
    70081 accacgctcg ccggggttac atcgtatttc atcatcaatg cctgggcctg ccgtaaagcc
    70141 actgatgcct catagggatt acctgttttt tcggccagta ccattagctt cttgatacgt
    70201 gaaagaactt tttcattcgc cgacacgagt cacctcctca atttccggat atgccacaat
    70261 atcaagcatc tcaggacgaa tacgggtcag ccttagctga acaccgcaac acgggcaggc
    70321 atcaaatatt accgacagcc cgcgctttgc tgcattcact acgcctcgac ttccgacagg
    70381 aataaccgcc agtccactgc tcagctcctg tgtggtgaca accgtggcac cgacccactg
    70441 gtaatgtgag cggggctttt tcagactctt cattgttttt tgtctcctga ttctcgccat
    70501 tcctgacagt acatgcacag gcttaccccg gggatggact cacggcgcga gtcagggatt
    70561 tcatcaccac agtcccgaca atgtcgtcgt gatacatgtc ccttaatccg aagagcagcc
    70621 cggatttcgg caaacctgtt gtcaatgttt acctgcgatt cgttctgagc catcgaatca
    70681 tcaacatcaa tgctcatgcc tcctcccgtc attttgttca gccgccatat ttctctgcag
    70741 ctcgcgcaga cggcgaataa cacgaataag gcgcagactc ttcactacat gcacatcgtc
    70801 aaaaacaggc gtatctcccg ctgattggga gccaaagaag ttgagacaga acataaacat
    70861 gttgaattgt ttattcggca cgtgaccgga aagccctgcc agaaaaagag caaattctcc
    70921 gccgtgttct gaaacagaga acccggccgc actggcattt ttatcttcac tgacatgaac
    70981 ctcacagccc atcgcctctg caagttcata agcaagccgg taagccatgt cctgcagatg
    71041 ttcgatatca tcctgcagag ccggaatgac ccagatatca gtaacaggct cgagccctac
    71101 gttggcaaac tcaactgagg aaagtgctgg ttctgtgggt aaaagtgaga gacccggcat
    71161 ctcgctggca atactaacgg cgtcagaagg agtatccgca gtcaatccca cctgagcgcc
    71221 agcgaaagct gatgcactga cagcgatatt tccggcgtcg ggaataaagt ggtactcatc
    71281 aggaataaca tcaccggtta aaactgaggg ccccccgagg aaatcgttct ggacttcagc
    71341 tttaggtaaa cgaggtgatc cacaagaacc gaaccattcg ccggtcacat catcgttatc
    71401 cccattgtca ttatctggat ctggttgttt aggtaagaca ggggcgttat tcagcttcgg
    71461 ttttaaagag gaaccgcctt gttgattctc atcgtttgca gtacccggca atgatgcagt
    71521 gctctgccat gtctggcgat ctgcatccac cagatgagat gccacaggtt ctggctcacc
    71581 aaataacttt ctctggttac gtgccttagg atccagctca agtagccacc gatcatagtt
    71641 aagagaaggg tgtggtaaaa cattcaccaa cataccgata aactcatctc tgaacatttc
    71701 gaaggaatac acctccggat cgtcaaactg agtacagaca tgaccgaaaa tctcattaaa
    71761 atcactatca gtctcagtca tcaccgaata ttgctgccaa atttttaaag catcagctcg
    71821 caaatttaat aaattaacta tctggggctt acctaaccca gaaaccagca actccggcat
    71881 aaagggataa agatattcca ccgtatgttc catacggctg atcattgagt tgtgaatggg
    71941 gtatccctgc tgtccgagca ggtccgccag ctctcgcagg gttaccgttc gtccaagagt
    72001 ttcttcatga atggcgcggg ctttttttat tcccagcgct ttgtcgataa aggttagatc
    72061 cccccttaca tcattctcgg ccagatgccc taccagacat tcaagcctgc caggccatgg
    72121 cttgaacaga gcatggaagc ggtaaaagcg ttcatcctgt gtttcagcaa acagctctcg
    72181 cagaatggcg tagcgggtgt taccaccatc gctgaaaata taaggagagc cggggatatc
    72241 cgggtttttc gtcactttcg ggaccgtatc cagaccacgg gctctgatgg attccttgat
    72301 ttcatcgtac ttaggattgc gtgttgtgcg aggattgtcc ggattaggag ctacctcatc
    72361 gagcgtcagc accatcggca tttcactggt cggcataatc gcaacagcag cggttgtagc
    72421 tgcagatgat tccttcgccc cctgtagcag cgcattatta agatttaaca gtggtgcttt
    72481 agccatagct cacctcccca taaccaaggt gatactccga gaagcgcata tactccccct
    72541 caaagcgaac tttgacagtg cccagcggcc cctgacgttg cttacccaga atgatttcag
    72601 ctatgcctct atccggggag tgctcgttat aaacttcatc gcggtacagg aacatgatga
    72661 catccgcatc ctgctccagt gagccggaat cccgaaggtc actgaccatc ggacgtttat
    72721 cctgacgctg ttcaacgctg cgattgagct gggataaagc tgccacaggg caccttatct
    72781 ctttggccag tgacttgagc gaacgggaaa tctcctgaat ttcctgagtg cggttctccc
    72841 ggccaggaca actcattaac tgaagataat caacaagaat aagtgagggc tgaccgtatt
    72901 tacgcacatt acgccgcgcg ctgatacgta acgtggaagg cgtctgataa ctggtatcgt
    72961 ctatcagcaa acgtccttcc caggaggtca gttttgctac ggcatccgca agtaaactcc
    73021 actgcccttc gctcagcaga cctttgcgca ggttatcgaa gggcactctg gccagcattg
    73081 aaagcagacg cattatcagc tgctgggttg gcatctctat gctgtagaac tgaacggtct
    73141 tgccgggact gccttccagc gcagcaacgg catgtttcag tgcttctgcc gttttcccca
    73201 ttgatggccg ggcacccagt aaaatcaggt caccgtcctg ccagccacag gttttctcat
    73261 ccagttcagc aaaacctgtc gctgtaccgg tcacaccgct tcccccactg accgattcca
    73321 gccagctgac cgtgtcagcg acctgagtcg ttacgctcag acaaatgtcg gggtcacagg
    73381 cctgctgagc cagactaaat aactgctttt cggccttttc aatcagaccg ggtatatccg
    73441 catcgccgac tgaggccagt tgatgtagct catgccccag cttaaccagc cgtcgcttac
    73501 gactgtactc gcgcacaatt tcggcataag caacgatatt ggcggcgctg ggcgtgtttt
    73561 ttgacagttc agccagataa gcgacccccc cgcaccgctc cagcagatct tttcgctcca
    73621 tggattcgga cagggttatc aggtcaatgg gcaggccagc actgaccaac cgttctatct
    73681 cccgaaaaat gatctgatgc tggccataat aaaaatctcc ggaattcaga agcggcgcaa
    73741 tttcatccca gcggtcgtta tcgagcatca gtccgcccag aacaccggtt tcagctccga
    73801 cattaaacag catggatact gcagaaacag atttatggct catacctcat ccgccccctg
    73861 accaaatccg ggctgaggcc ggttaaccag aaccgcatca aacttatctt tccattgagg
    73921 aaataactca cagaccaggt ggtgcatgga ctccgctgcc ggcaggctta cccggtcagt
    73981 tttatattcg agacgatgta ctggctgccc gcacgcatgc ccacgtttgt agacttccag
    74041 ttgctctatt tcggtattca gcattgatat ggcaatacgg tctgactggg ggtactgacc
    74101 tttatccacg attgccttga gttcgttgag ggtgtttcga tccagtacag tgggttcaac
    74161 acagttggcg agaattcgaa tatcgggaat atggataccg tagggttcca gaaccagaag
    74221 tttggataaa agacgtacag tgccgcgtag gaactcacgt acatcgggta aaatcggttt
    74281 aataacaccc atgacgcttt gagtcgcagc gagcaccacg agctccacca tcaccccgcc
    74341 agcgcctttg gaatcgacga ttatgacgtc atattgtctg aaaagaggat gctgcaggac
    74401 attacgcaga cgcattctgc catcagctgc atgcagcata tcattggaaa gacgatcgtc
    74461 aggatcgttg gaaatgatga cgtcaagatt gggaataacc gtgcgggaaa tgatgctgtc
    74521 aggtttgtta aggtcagcag tctgcatgag taattcatac agtccgcagg gtgcttcata
    74581 gtgaagttta aaaatactgc tggctgttgg ctgattataa tcaccatcga ttagcagtgt
    74641 tttcagacca gcatcggcgg tgtaacccgc aatattgcct gccttggttg acttcccttc
    74701 tccgccctta gtggatacta ctggcaatac taccgggaat tgttgctcat cagggagtaa
    74761 caacgaatgc ggtgaaacct gctgtgccaa atgaatactg gcgtctggtt ttctttctac
    74821 agactccccg gttgaaacct ggggggaaca cttaacgcga gatacagttt gcatgcaata
    74881 cactcgaaat ttattcgaat gtgttcgcct gcctgctacc aattcaaaaa gtcaaagcgg
    74941 tgtctaactt tttgacaagg ggattgaaaa tccccgtgtc cgtggttcga ttccgagtcc
    75001 gggcaccact tattcagaaa atccagccta tggctgggtt tttgcttttc tgggaatgga
    75061 aatccgtagc ccccatctct ggcctgatta gctataacgg gaaggccaga ttttctctgg
    75121 cgcaacgccc agcgcttcgg cgatcagccg ctcatctttg ggcctgggtc aaaagcttac
    75181 ttagctacag ggagattatt accagtaata acgcgtatca ctccatctga cggttcgcta
    75241 gcctcgacaa gtgaatccaa tatctccgcc atgaactttt tcatcactga caacaacaat
    75301 tccttcgcca attttagcat tttttctttt tcggtttctt tattcttaaa tactgtttcc
    75361 gactcttgtt cataatcata aattaatact cagtacatca tgactgatgg tagttatcgg
    75421 ggtaacagag cacatacttt aaaataatta ttcatactgt gttattacgg aaagatttta
    75481 acctaatgcg tgtcagtcag gcacgcagat aaaaaataac cggggacaaa agttaaacaa
    75541 aatgctgtta gccggaagta tcagtattgt tctgttgtcc gctacagtca gtccggtatg
    75601 gacagacgat aatgccagtg cagcgtcctg cttttttacc tgtatgttga ataaccattt
    75661 caataaatca ttatagaatc acatctgttt attattgcct gatccggggt gagtctttat
    75721 gaaaagtcgt tatttactat tttttctacc actgatcgta gctaaatata catcagcagc
    75781 aacaatgcaa ccctttcatt ctcctgaaga atcagtgaac agtcagttct acttaccacc
    75841 accgccaggt aatgatgatc cggctttccg ctatgataag gaggcttatt ttaagggcta
    75901 tgcgataaag ggttccccac gatggaaaca agctgctgag gatgcagata taagcgtgga
    75961 aaatatagcc agaatattct cgccagtagt gggtgctaaa attaatccca aagatacgcc
    76021 agaaacctgg aatatgttac agaatcttct gaaaatgggc ggctactacg ctactgcttc
    76081 ggcaaaaaaa tattatatgc gtactcgtcc ctttgtctta tttaatcatt ctacctgccg
    76141 tcctgaagat gagaatactt tgcgaaaaga tggctcttac ccttccgggc atactgctta
    76201 tagtacactt ctggcattag tattatccca ggccagaccg gaacgcgcgc aggagctcgc
    76261 cagacgagga tgggagttcg ggcaaagcag agtgatatgc ggtgctcact ggcaaagcga
    76321 tgttgatgct ggccgttatg tgggagcagt agagtttgca aggctgcaaa caatcccggc
    76381 ttttcagaag tcactggcaa aagtccgtga ggagctgaac gacaaaaata atttattgag
    76441 taaagaagaa cgccccgaac ttaattactg aaggtgaaag tcttcccgca aactggccac
    76501 agcaaatgaa aggaagtgca actgcgtagg ggcgaccggg cgtggagaac gcctttggtt
    76561 tccccgattc gcatgaattc aacgtccccg tttgcagtcc gtccagaccg tcatgacgtc
    76621 gttgtccggc tgaagcggta aaaccggtct ggctcactga ctatccacag cgaattccgg
    76681 ccatcagaag ctaagggatg cgttctggag tttaaacact ctccaccaaa tcccccaacg
    76741 tcaccatcaa catcatcgga tccatcggcg acggtacaaa ccccacccac tgataaaatt
    76801 cccgcgcttc atccgacagg gcgtgaacca gcatcccacg aatgccgata gtctccgcca
    76861 cctgaataac ccgcagccct gcgtcgcgta ccagcgcccg agcgacgccc tgcccatgaa
    76921 gcgatttatc caccgccaga cgccccaata ccacaaccgg aatcgggtca ggcatattgc
    76981 gacgaaagcg accgggggag gtattcgtcg tgaccgcgct ggacgccagc gagtaatagg
    77041 ccagtacgtt cgaatcgctg ccacaacaca caaaggtacg ggacgcgcca gtggtctgat
    77101 ttttcatcgc ccgctgtttc agccagttat ctatagaatc cacaccgcag caaaacggag
    77161 taagaatatg tccggcatga agcggctcag gggtggagat catttttcct gctcccacgg
    77221 cgcaggggtc tgcatggttt tacgcagtgc ggcattaggt gaaggtgttt gatccaaacg
    77281 aacgagaaat tcctgataag cctctggatc ggccataatg atgcgttgtt cgataagcac
    77341 ttcttctgcg gcagcacggg cagcttccaa cacaaagtct gtgcggtttt tccctctggc
    77401 tttcgccgct cgatcaataa gatcgcgctc ggcgggtttg atacgcaggt tcagagtttc
    77461 acgtttcatc gccatactgt ttgcggctgg catagtgttg tcctcttgta cttctgtgga
    77521 tattaagtat acaacacgcg taacgcagat gtcattacga taaatttaga aggaatggaa
    77581 ccggagtagc gaaccgaaag gttttctact catttataga ttcagtacca ggctgtgcgc
    77641 tggcattcgc tgtgagtgat tcctcctcgg ggccgacgca gcaaaagatt caatactgcc
    77701 gcgccaaaac acgcaacatt atataatcag aaagcataaa cctaacggat acgcacagta
    77761 agaacctcaa taacgtgtta catcgttttt cataaagcca accatacgat tgaatgtttc
    77821 ccctccccct caaacttccg gatattgtta caccgtctac ccgccgcagt atatatttac
    77881 cgcgttgtat gcctttcctg gccgagatcg ttaatattta cctccaagat aaaccttatc
    77941 acaaattaac atcagatctt atacctcatg ctaactaccc ccatgaaatt aaagagctat
    78001 tctctaaaag aataagggta attattactt aattcaaatt ttaaagagat aatttgataa
    78061 taacatgagc caattcttgt atatttccat ctttttttta tacgcgacat agttttttaa
    78121 cgatactata ataggtagaa atgcaatata aaatagcatt ttccatagaa aatgaaaaga
    78181 tcgccacctg ataccttaag ttcgcaaata attatatagc tatatattag ttttcttttg
    78241 aaatattttt cagaataatt tttgatttac acgcacattt aataaaagga aattatcatg
    78301 ctaaaggtgt ttaatccctc acctgtccag gtggggagca ttgaatgttt acaatcagcg
    78361 caaaactggc agaggaaatc cttatcactt cagggattaa atttactgca gtccgtactc
    78421 atcaagctca ccacgggtaa aatttcaatt acgacatcgt ccggggagta tattacggca
    78481 tcagggccaa tgttaatatt tttagctaaa gatcaaacca ttcatatcac tatggaagag
    78541 actcatgaac agttaaatta taatttaatt gaattagatt cagcgtcaat aaaaaatgct
    78601 tataattttt ttctgtatga acatgcagac ttttcggccc cattaacaaa accgacgaca
    78661 aaacatctgt tagcgccaat agaaacaggc gtagcaagag tattcaacct cttacactct
    78721 tcaaataaaa gccagaaatt atcccaagat aaaaaggaat atttaataag atttctgctt
    78781 tcagagttca tctatgaacc tgaagcattt gctctcttca gagaactatc gcaaaataca
    78841 ttagccgaaa acatctataa tattattata agcgacataa gtcgaaaatg ggcgctcaag
    78901 gatatttctg actcactcta tatgagttgt tccacattaa aaaggaaatt gaaacaagag
    78961 cacacctcat tcagtgaagt ttaccttaat gcgcgaatga ataaagcgac aaaacttcta
    79021 cgcaatagtg aatataatat tactcgagtg gcttatatgt gtggttatga tagtgcttct
    79081 tattttacat gcgtttttaa aaaacatttc aaaactacac catcggaatt tttagcgttt
    79141 ttatcctcct ctcgtcatca atatgttaat tgagatatct gacaatgcag tataagaaca
    79201 aagcaaaaca tattaatata agagatggaa ttctgttgct cgctaaaaaa ttcgatctaa
    79261 cattgagcga gaaaaaagtt atttattacg tggctgcagg attatctgtt aaaagttgct
    79321 caaatttatt agatcgaaat ataaaaacga tttcaacaca aaagagatca gcctataaaa
    79381 aaatggatat tactactgat gttgaattaa tccatttgat gctgaatgag ttttacatat
    79441 cagtcgatat tacgtaattt tttctaaaat gttgctagaa tggtaggcaa ggcaactctg
    79501 gatatcatct tcagagatcg ttccgcaaac gctatggata attcttcgct gtctatcggc
    79561 tggctgacga tagactctac accgccagta cgttccatga agaataatag tgatattggc
    79621 gccggaggcg ataatatcac taacatcaat acaccgacct tttattgggt cgcttagaag
    79681 ctcacgcaac aattaagctg actattgata cacaaccgtc cgccgaacca acgttgggat
    79741 cgactgttag cagtctggat aataccgtca gccttaaggg agtcgtggag gcgcatcagg
    79801 atattcaggt gaaggtcacg gtcgacgata cggactacac cgccagtgtc gataacgata
    79861 ccggtaactg gcatgtttct gttccgcaat ccgctattct gtcgggggag aatcagtata
    79921 ccataacggc caccgatccc gccggtaata gcgccgccgc cagtgtaaca tttacaggta
    79981 catcgcccac ggaaaatccg gtcaacaaga gttccggcgt agatgaaatg attatgcctg
    80041 ataactaaac atcaccatgc gaggtctctt cggaggcctc ctgaaaaaac agaataatat
    80101 tcattgtctg ttaattatta cagagagagt taatttataa aaaaaagcgg cagactacgc
    80161 tgccgcaaat atgaggagga caattaccgt tacgctacac cacaaagtaa tccgttactg
    80221 aggtaagtaa aacataaata tccccaacaa tgaatcaaca aatcaagcaa tcgtcaaatc
    80281 atggtattaa caaccttgtt ctgttttagc atgctgtgac agtaaaaata gattttagtc
    80341 attctgtata tcacacgaaa atttataaaa cagatttggt tcactcacaa tatacaaatt
    80401 attttcatta tccatggcaa tcccttctgg ttggggtata tcgtctctga gccctgacca
    80461 ctccgccgtc aggaacaatc gatcgcgcac ccgccactcg gaactgacct ccagaatcat
    80521 ttttgactcg tccgacaaca ccagcagcga atccgttggg gcatggtatt caagtccgga
    80581 gacatcgctc acactcgcag tgatggcaga aggcaacgct ctggtgatac catttttgct
    80641 catctctact tctttgatca taatgggttt tctttctttt gcggcatata atctctcatt
    80701 tttcgcatcc catgccgtac cttccagccc tttatttttt gctttgtcat agccctcaag
    80761 cttcaccatg gagattatct gcatagcgcc gcgctgaata tccacctgtg ttttatagac
    80821 cgcgccatct ttctcactgc ctatctggaa ctggttgccc ccactccatg caatagactc
    80881 cgggtcgtgg atgccctgca gcggcatccg ccctaccagc tgcccttctg tcgttaacca
    80941 gaccagttca gggggattat taataacggc gaaaagcatc ctgtcttcgg cggagtaggt
    81001 caaacctgaa aggttactct taactcctgc gactggtttt tgctgaataa ccgctttata
    81061 gctactcagt gctagcgccg agggtttatc accatatttg aggatcagtt gataaacata
    81121 gcgtatatcg tccctgacca taaataaaat cacgcccaag agtacaacca caataacgcg
    81181 ttttagtaat ctcataaaaa atccatagca gatcgcgtca cgactgatgt cgtaacgcat
    81241 ttcttaaaaa taaagccgat gtccgataga atcgttattc ggttatggcg agcgccatta
    81301 gcataggcaa aatgaaatag tgagggttat cacaaaaagc ccgattttaa tcactaacgt
    81361 accctttttg taaattgaca taatcaagag gagggtagtt tcggctaatt atttaaatag
    81421 tacgtctgca aattcgcccc tgtatgcagg gcaaatgaca aaaagtgata attaatgaga
    81481 tgtaacaccg taatttgatc tgctattgct gctcccactt ctattcaacc gggcagcaaa
    81541 aaaatgaaac tcaaccttat taccgtcagc ctggctacgc tcgttgccgc tggcgcattc
    81601 ccggcccatg ccggtcctca ggcgcatgtc gtgtgcggct atcaccacac gctgggcgat
    81661 gacgcgatta tgatgtttgg taaagcgaat caggcgatgt ggcatgactt ttttggcaac
    81721 acccacaccg acgcggtctc tacctaccag acgttgcgcg cgcaacccga taccacctgt
    81781 gataataaag ccgacagctc cggttactgg gcaccgtcca tgaaattacc cgatggtgaa
    81841 atcgtaaatc cggcctacca aaagacctat tatcaatcca caaatgtagc gcaatatccg
    81901 ctccatccat tcccggccgg gctggagtta ctggcaggcg atcatcacgg tactggcccc
    81961 agttccgcaa tcaccttttt atgtgccaac ggcaaaggtt acaccaacaa ggtaggcgaa
    82021 atatgcggcc tgcgtaaagc gggcgatgcc gtccagttta atatcgggat cgctttcccc
    82081 aactgttggg atgacgtcaa cctgaaaccg acacatagcc acaataatgc tatctatgcc
    82141 gaccacggga aatgttccgc agactatccg gttaaaatcc cgacggttaa tatgaacatc
    82201 gcctgggtac tcccgcagat ctcctcgctg gatacgtcca aagtggaatt gtcgatggac
    82261 ccggtaatgc atggcgaaac ccgggaagag cgctggggaa gtatttatac cgcccatgcc
    82321 gattttatga atggctggac ggaagatggc gcgcagttta tgacggatct gtgtatgaat
    82381 cagggactgg attgcggcac tgcggttcct tacgcctaca gtaaagcgga agaaaatacc
    82441 tgggtaagca gcgaagacga caagcctcat gccagcgtcg atacgttgta cgtacaggat
    82501 gactggacaa atggcggacg cacgcagcac ccggaaacgc tcacgctggt gaaatttaag
    82561 atcccgcccc tgcctgccaa tatggacgct tcgctattca aataccgtat tcgccttttt
    82621 ggcggcaaaa cggaaacgaa cggcgccgat caaattttct tttacccgac cagcagtgac
    82681 tggcacgcca gtagcgtgtc atggaacaat aaaccggcga tcaattaccg ttccgatgcc
    82741 gtattatatc taaaccattc acatgagtat cgcatggttg atgtcgataa agcggtgcgc
    82801 aaagcgctag cggaagggaa aacggaaata tcctggtata tcggcggcga ccgtcaggga
    82861 aatcactacg atttcatgcc agcggactca aaacagagcc tggtgctgat gctgaccggt
    82921 ttcaaaaaga cgccggagct gtaatagtaa actgtgcccg ctgacgcaac agcgggcacg
    82981 atggcgacac aagcattacg gcacgtcgtc aaaacctgac caatacctta gaaaaacaac
    83041 cgtttcttct caggttgtag cccctgttgc tgctgaacat cctgcagata acaggtcgct
    83101 acgatggcaa gccgggcata gaaggcgcta acggtattgc gttgcagcaa ttccagatag
    83161 cggaatcccc agggtagcag atgcgcctcc agtaaccggt tggccgccac gttgtcgcct
    83221 tgcgccagca gatcgctaca ggctaatagc atcaggccaa actgatcttc cggctcgcgt
    83281 tcacggtcag tgaataccat tccctgcgac tgtaaaaaag ctcgataatc ggcggtggtt
    83341 tcccccatca gcaaattatc tttttccaga tagaccgatc cccagggcgg gacgggcatc
    83401 tttccctggc cttcaaacaa tacggaaaat tgccatgtaa gcgcatcatc atccggtagc
    83461 gaccatgacg cgcacagtga ttcaatatgt ccgcgatcgc gccaggggta aagctcaggc
    83521 aacgttggca aacaatcgaa caacgctttc acctccggcc tctcagggga gtagtaaaac
    83581 agtgcgccga ggatacgcgg caaaacagca cgggaaggca tagcaatagc tcctgaaata
    83641 tttcgcctga tgacgctacg cttatcaggc ttacatggca caagccgggc aaaaactaca
    83701 ttggcagcgt ccacagattg taaaacgcaa tcctacccgc caactccgcc gcgataacca
    83761 cca
//
LOCUS       DAGWFR010000003        82450 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.003, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000003 DAGWFR010000000
VERSION     DAGWFR010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 82450)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 82450)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..82450
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.003"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..592)
                     /gene="helD"
                     /locus_tag="MOX77_000183"
     CDS             complement(<1..592)
                     /gene="helD"
                     /locus_tag="MOX77_000183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460049.1"
                     /note="catalyzes the ATP-dependent unwinding of duplex DNA
                     in the 3' to 5' direction with respect to the bound single
                     strand; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase IV"
                     /protein_id="HCA3355866.1"
                     /translation="MELKATSLGKRLAQHPYDRAVILNAGVKVSGDRHEYLIPFNQLL
                     AIHCKRGLVWGELEFVLPEDKVVRLHGTEWSETQQFHRYLDAHWRRWSQEMSDVAAQA
                     LQEQWARISERTGGNQWLTREHVRGLEHEIRQTFAALPLPVSRLEEFAHCREIWRKCL
                     AWLQDSEGSRQQHNQAYADAMLEAHADFFTQIESSPL"
     gene            716..1162
                     /locus_tag="MOX77_000184"
     CDS             716..1162
                     /locus_tag="MOX77_000184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YccF domain-containing protein"
                     /protein_id="HCA3355867.1"
                     /translation="MRTVLNILNFVLGGFATTLAWLLATLVSIVLIFTLPLTRSCWEI
                     TKLSLFPYGNEAIHVDELNPAAKSVLMNTGGTLLNIFWLLFFGWWLCLMHIASGIAQC
                     VTIIGIPVGIANFKIAAIALWPVGRRVVSVETARAAREANARRRFE"
     gene            1181..3334
                     /gene="yccS"
                     /locus_tag="MOX77_000185"
     CDS             1181..3334
                     /gene="yccS"
                     /locus_tag="MOX77_000185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01666 family membrane protein"
                     /protein_id="HCA3355868.1"
                     /translation="MLSPLIRRYTWNSTWLYYIRIFIALCGTTALPWWLGDVKLTIPL
                     TLGMVAAALTDLDDRLAGRLRNLIITLICFFIASASVELLFPWPWLFALGLTLSTSGF
                     ILLGGLGQRYATIAFGALLIAIYTMLGASLYDHWYQQPLLLLAGAVWYNLLTLTGHLL
                     FPIRPLQDNLARSYEQLAHYLELKSRLFDPDIEDESQAPLYDLALANGQLMATLNQTK
                     VSLLTRLRGDRGQRGTRRTLHYYFVAQDIHERASSSHIQYQTLRDYFRHSDVMFRFQR
                     LMSMQAQACTQLARCILLRTPYQHDPRFERVFTHIDAALERMRASGASLELLNTLGFL
                     LTNLRAIDAQLATIESEQAQAMPRNESENQLADDSLHGFSDIWLRLSRNFTPESALFR
                     HAVRMSLVLCIGYALIQITGMRHGYWILLTSLFVCQPNYNATRHRLALRIIGTLVGVA
                     IGLPILWFVPSLEGQLVLLVITGVLFFAFRNVQYAHATMFITLLVLLCFNLLGEGFEV
                     ALPRVIDTLIGCAIAWAAVSFIWPDWRFRNLPRVLQRATDANCRYLDAILEQYHQGRD
                     NRLAYRIARRDAHNRDAELASVVSNMSSEPDVTAETREAAFRLLCLNHTFTSYISALG
                     AHREKLSNPDVLGLLDDAVCYVDDALHHQPEDEQRVHQALEGLKQRVQSLETRPDSKE
                     PLVVQQIGLLIALLPEIGRLQRQISPPTSTLITQP"
     gene            complement(3321..3926)
                     /locus_tag="MOX77_000186"
     CDS             complement(3321..3926)
                     /locus_tag="MOX77_000186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TfoX/Sxy family DNA transformation protein"
                     /protein_id="HCA3355869.1"
                     /translation="MRALSYDRIYESQEYLASLGTIQYRSLFGSYSLTVEDTVFAMVA
                     NGELYLRACEESVPYCVKHPPAWLMFMKCGRPVMLNYYRVDESLWRDQQQLVRLSKYS
                     LDAAMKEKHSRILQHRLKDLPNMTFHLETLLNESGIKDENMLRILGAKMCWLRLRQSN
                     PLLTVKVLYALEGAIVGVHEAALPASRRQELADWAHSLTAG"
     gene            4143..4652
                     /gene="sulA"
                     /locus_tag="MOX77_000187"
     CDS             4143..4652
                     /gene="sulA"
                     /locus_tag="MOX77_000187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division inhibitor SulA"
                     /protein_id="HCA3355870.1"
                     /translation="MYTSGYANRSSSFPTTTHNAARTATENAAAGLVSEVVYHEDQPM
                     MAQLLLLPLLRQLGQQSRWQLWLTPQQKLSREWVQSSGLPLTKVMQISQLAPRHTLES
                     MIRALRTGNYSVVIGWMTEELTEEEHASLVEAAKVGNAVGFIMRPVRAHALPRRQHSG
                     LKIHSNLYH"
     gene            5007..6059
                     /gene="ompA"
                     /locus_tag="MOX77_000188"
     CDS             5007..6059
                     /gene="ompA"
                     /locus_tag="MOX77_000188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin OmpA"
                     /protein_id="HCA3355871.1"
                     /translation="MKKTAIAIAVALAGFATVAQAAPKDNTWYAGAKLGWSQYHDTGF
                     IHNDGPTHENQLGAGAFGGYQVNPYVGFEMGYDWLGRMPYKGDNTNGAYKAQGVQLTA
                     KLGYPITDDLDVYTRLGGMVWRADTKSNVPGGASTKDHDTGVSPVFAGGIEYAITPEI
                     ATRLEYQWTNNIGDANTIGTRPDNGLLSVGVSYRFGQQEAAPVVAPAPAPAPEVQTKH
                     FTLKSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQG
                     LSEKRAQSVVDYLISKGIPSDKISARGMGESNPVTGNTCDNVKPRAALIDCLAPDRRV
                     EIEVKGVKDVVTQPQA"
     gene            complement(6131..6583)
                     /gene="matP"
                     /locus_tag="MOX77_000189"
     CDS             complement(6131..6583)
                     /gene="matP"
                     /locus_tag="MOX77_000189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="macrodomain Ter protein MatP"
                     /protein_id="HCA3355872.1"
                     /translation="MKYQQLENLESGWKWKYLVKKHREGELITRYVEASAAQEAVNLL
                     LALENEPVRVNVWIDRHMNPALLNRMRQTIRARRKRHFNAEHQHTRKKSIDLEFMVWQ
                     RLAGLAQRRGKTLSETIVQLIEDAEHKEKYATQMTTLKQDLQALLGKK"
     gene            6769..8529
                     /locus_tag="MOX77_000190"
     CDS             6769..8529
                     /locus_tag="MOX77_000190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lon protease family protein"
                     /protein_id="HCA3355873.1"
                     /translation="MTITKLAWRDLVPDSESYQEIFAQPHATDENDTLLSDTQPRLQF
                     ALEQLIQPWASSSFMLTKAPEEQEYLTLLSDAVRALQTDAGQLTGGHYDVSGHTVHYR
                     AAQNAQDNFATVTQVVSADWVEAEQLFGCLRQYNGDITLQPGLVHQANGGVLIISLRT
                     LLAQPLLWMRLKAIVSRERFDWVAFDESRPLPVSVPSMPLKLKVILVGERESLADFQE
                     MEPELAEQAIYSEFEDNLQIADAEAMTLWCQWVTRIALRDNLPPPAPDAWPVLIREAV
                     RYTGEQDTLPLCPLWIARQFKEASPLCEGDTCGAEALSLMLARREWREGFLAERMQGE
                     ILQEQILIETEGERVGQINALSVIEFPGHPRAFGEPSRISCVVHIGDGEFNDIERKAE
                     LGGNIHAKGMMIMQAFLMSELQLEQQIPFSASLTFEQSYSEVDGDSASMAELCALISA
                     LANVPVNQNIAITGSVDQFGRAQPVGGLNEKIEGFFAICEQRELNGKQGVIIPAANVR
                     HLSLKSELLQAVKEEKFTIWAVDDVTDALPLLLNLVWDGEGQTTLMQTIQERIAQATQ
                     QEGRHRFPWPLRWLNAFIPN"
     gene            8598..9116
                     /gene="fabA"
                     /locus_tag="MOX77_000191"
     CDS             8598..9116
                     /gene="fabA"
                     /locus_tag="MOX77_000191"
                     /EC_number="4.2.1.59"
                     /EC_number="5.3.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014915875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 3-hydroxydecanoyl-ACP
                     dehydratase/trans-2-decenoyl-ACP isomerase"
                     /protein_id="HCA3355874.1"
                     /translation="MVDKRESYTKEDLLASGRGELFGAKGPQLPAPNMLMMDRVVKMT
                     ETGGNFDKGYVEAELDINPDLWFFGCHFIGDPVMPGCLGLDAMWQLVGFYLGWLGGEG
                     KGRALGVGEVKFTGQVLPTARKVTYRIHFKRIVNRRLIMGLADGEVLVDGRLIYTAHD
                     LKVGLFQDTSAF"
     gene            complement(9216..9383)
                     /gene="rmf"
                     /locus_tag="MOX77_000192"
     CDS             complement(9216..9383)
                     /gene="rmf"
                     /locus_tag="MOX77_000192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome modulation factor"
                     /protein_id="HCA3355875.1"
                     /translation="MRRQKRDRLERAHQRGYQAGIAGRSKEMCPYQTLNQRSYWLGGW
                     RQAMEDRAVMA"
     gene            complement(9637..10200)
                     /gene="pqiC"
                     /locus_tag="MOX77_000193"
     CDS             complement(9637..10200)
                     /gene="pqiC"
                     /locus_tag="MOX77_000193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity-associated transporter
                     subunit PqiC"
                     /protein_id="HCA3355876.1"
                     /translation="MKKWLVVIMAFWLASCSSGGENKSYYQLPIAQSGVQSTASQGNR
                     LLWVEQVSVPDYLAGNGVVYQTSDVQYVIANNNLWASPLDQQLRNTLVANLSARLPGW
                     VVASQPLGTTQDTLNVTVTGFHGRYDGKVIVSGEWLLNHNGQLIKRPFHIEASQQKDG
                     YDEMVKVLASAWSQEAAAIADEIKRLP"
     gene            complement(10197..11837)
                     /gene="pqiB"
                     /locus_tag="MOX77_000194"
     CDS             complement(10197..11837)
                     /gene="pqiB"
                     /locus_tag="MOX77_000194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intermembrane transport protein PqiB"
                     /protein_id="HCA3355877.1"
                     /translation="MEPKKGEAKVQKVKNWSPVWIFPIVTALIGAWILFYHYSHQGPE
                     VTLITTNAEGIEGGKTTIKSRSVDVGVVESATLTDDLTHVQIKARLHSGMEKLLHKDS
                     VFWVVKPQVGREGISGLGTLLSGAYIELQPGSKGSQPESYQLLDSPPLAPPDAKGIRV
                     ILDSKKAGQLSPGDPVLFRGYRVGSVETSSFDPQKRTMSYQLFIKAPNDRLVTSNVRF
                     WKDSGIAVDLTSAGMRVEMGSLTTLFGGGVSFDVPEGLEQGQPVAEKTAFNLYDDQKS
                     IQDSLYTDHIDYLMFFKDSVRGLQPGAPLEFRGIRLGTVSKVPFFASNMRQVFNDDYR
                     IPVLVRIEPERLKAQLGENADVGAHLTELLKRGLRASLKTGNLVTGALYVDLDFYPKE
                     PPITGLREFDGYEIIPTVSSGLAQIQQRLVETLDKINNLPLNPMIEQATNTLSESQRT
                     MRRLQTTLDNMNKITSSQSMQQLPADMQTTLRELNRSMQGFQPGSAAYNKMVADMQRL
                     DQVLRELQPVLKTLNEKSNALVFEAKDKKDPEPKRAKQ"
     gene            complement(11842..13095)
                     /gene="pqiA"
                     /locus_tag="MOX77_000195"
     CDS             complement(11842..13095)
                     /gene="pqiA"
                     /locus_tag="MOX77_000195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity-associated transporter
                     subunit PqiA"
                     /protein_id="HCA3355878.1"
                     /translation="MCEHHHAAKHILCPQCDMLVALPRLSHGQKAACPRCGATLTTEW
                     DAPRQRPTAYALAALFMLLLSNLFPFVNMNVAGVTSEVTLLEIPGVMFSEDYASLGTF
                     FLLFVQLVPAFCLVTILLLVNRASLPLSVKKTLARIFFLLKSWGMAEIFLAGVLVSFV
                     KLMAYGDIGIGSSFIPWCLFCLVQLRAFQCVDRRWLWDDIAPQPALAQPLTPGITGIR
                     QSLRSCACCTAILPAESLVCPRCHTKGYVRRKNSLQWTLALLFTSIMLYLPANILPIM
                     ITDLLGSKMPSTILAGVILLWSEGSYPVAAVIFLASIMVPTLKMIAIAWLCWDAKGHG
                     KRDSERMHFIYEVVEFVGRWSMIDVFVIAVLSALVRMGGLMNIYPAMGALMFALVVIM
                     TMFSAMTFDPRLSWDREYEPGHEES"
     gene            complement(13110..15017)
                     /locus_tag="MOX77_000196"
     CDS             complement(13110..15017)
                     /locus_tag="MOX77_000196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000053132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCA3355879.1"
                     /translation="MSLISMHGAWLSFSDAPLLDNAELHIEDNERVCLVGRNGAGKST
                     LMKILNREQGLDDGRIIYEQDLIVARLQQDPPRNIAGSVYDFVAEGIEEQAEYLKRYH
                     EISRLVMTDPSEKNLNEMARVQEQLDHHNLWQLENRINEVLAQLGLDPNAALSSLSGG
                     WLRKAALGRALVSNPRVLLLDEPTNHLDIETIDWLEGFLKTFNGTIIFISHDRSFIRN
                     MATRIVDLDRGKLVTYPGNYDQYLLEKEEALRVEELQNAEFDRKLAQEEVWIRQGIKA
                     RRTRNEGRVRALKAMRRERSERREVMGTAKMQVEEATRSGKIVFEMENVDYQVEGKQL
                     VKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHVGTKLEVAYFDQHRA
                     ELDPEKTVMDNLAEGKQEVMVNGKPRHVLGYLQDFLFHPKRAMTPVRALSGGERNRLL
                     LARLFLKPSNLLILDEPTNDLDVETLELLEELIDGYQGTVLLVSHDRQFVDNTVTECW
                     IFEGGGKIGRYIGGYHDARAQQEQHLATKQPMTKKNEEVIAPKAEIVKRGSSKLSYKL
                     QRELEQLPGQLEDLEAKLEALQAQVADAAFFSQPHEQTQKVLADLSQAEQELEQAFER
                     WEYLEGLKNGA"
     gene            complement(15030..17138)
                     /gene="rlmKL"
                     /locus_tag="MOX77_000197"
     CDS             complement(15030..17138)
                     /gene="rlmKL"
                     /locus_tag="MOX77_000197"
                     /EC_number="2.1.1.173"
                     /EC_number="2.1.1.264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 23S rRNA
                     (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA
                     (guanine(2445)-N(2))-methyltransferase RlmL"
                     /protein_id="HCA3355880.1"
                     /translation="MNSLFASTARGLEELLKIELEKLGAVGCQVVQGGVHFQGDTRLI
                     YQSLMWSRLASRIILPMGECKVYSDLDLYFGVQAINWTEIFNPGATFAVHFSGLNDTI
                     RNSQYGAMKVKDAIVDAFTRKNLPRPNVDRESPDLRINVWLNKETASIALDLSGDGLH
                     LRGYRDRTGLAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMWATDRAPGL
                     HRGHWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIERARSNAR
                     RAGIGELITFEVKDVAQLSNPLPKGPYGTVISNPPYGERLDSDPALIALHSLLGRTMK
                     NQFGGWNLSLFSASPDLLGSLQLRADKQFKAKNGPLDCVQKNYHIAETTADSKPATVA
                     EDYANRLRKNLKKLEKWARQEGIECYRLYDADLPEYNVAVDRYGDWAVIQEYAPPKTV
                     DAQKARQRLFDIIAATLSVLGIPPNKLVLKTRERQKGKNQYQKMSEKGEFLEVSEYNA
                     RLWVNLTDYLDTGLFLDHRIARRMLGEMSKGKDFLNLFSYTGSASVHAGLGGARNTTT
                     VDMSRTYLEWAERNLRLNGLSGRAHRLIQADCLGWLREANEQFDLIFIDPPTFSNSKR
                     MEESFDVQRDHVALMKDLKRLLRKGGTIMFSNNKRGFRMDLEGLAELGLTAQEITQKT
                     LSPDFARNRQIHNCWLIRAA"
     gene            17237..18346
                     /locus_tag="MOX77_000198"
     CDS             17237..18346
                     /locus_tag="MOX77_000198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcbX family protein"
                     /protein_id="HCA3355881.1"
                     /translation="MATLSRLFIHPVKSMRGIGLTHALADISGLAFDRIFMVTESDGT
                     FITARQFPQMVRFTPSPLHDGLHLTAPDGSSALVRFTDFTPQDAPTEVWGNHFTARVA
                     PTAINQWLSGFFSRDVQLCWVGPQLTRRVKRHNAVPLGFADGYPYLLTNEASLRDLQQ
                     RCPAGVQMEQFRPNLVVSGVAAWEEDSWKVLRIGDVIFDVVKPCSRCIFTTVSPEKGQ
                     KHPSGEPLATLQAFRTAQDNGDVDFGQNLIARNSGVIRVGDEVEILATAPAKAYGATT
                     LDDSVTPEKHPDGSVTIDWQGQTFCGNNQQVLLEQLENQGIRIPYSCRAGICGCCRIR
                     LLEGEVSPLKKSAMGDDGTILSCSCVPKTALRLEN"
     gene            complement(18343..18885)
                     /gene="zapC"
                     /locus_tag="MOX77_000199"
     CDS             complement(18343..18885)
                     /gene="zapC"
                     /locus_tag="MOX77_000199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapC"
                     /protein_id="HCA3355882.1"
                     /translation="MRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFSRKMLTPDAF
                     CPTGFCVDDAALYFSFEEKCRDFELTKEQRAELVLNALVAIRYLKPQMPKSWHFVAHG
                     EMWTPGTGDAASVWLSDTAEQVNLLVVEPGENAALCLLAQPGVVIAGRTMQLGDAIKI
                     MNDRLKPQVHCHSFSLEQAV"
     gene            complement(19051..20061)
                     /gene="pyrD"
                     /locus_tag="MOX77_000200"
     CDS             complement(19051..20061)
                     /gene="pyrD"
                     /locus_tag="MOX77_000200"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HCA3355883.1"
                     /translation="MYYPFVRKALFQLDPERAHEFTFQQLRRITGTPLEALVRQKVPT
                     KPVTCMGLTFKNPLGLAAGLDKDGECIDALGAMGFGSLEIGTVTPRPQPGNDKPRLFR
                     LVDAEGLINRMGFNNLGVDNLVENVKKAHFDGILGINIGKNKDTPVENGKDDYLICME
                     KVYAYAGYIAINISSPNTPGLRTLQYGDALDDLLTAIKNKQNDLQVIHHKYVPVAVKI
                     APDLCEEELIQVADSLLRHNIDGVIATNTTLDRSLVQGMKNCQQTGGLSGRPLQLKST
                     EIIRRLSLELKGQLPIIGVGGIDSVIAAREKIAAGATLVQIYSGFIFKGPPLIKEIVT
                     HI"
     gene            complement(20269..22881)
                     /gene="pepN"
                     /locus_tag="MOX77_000201"
     CDS             complement(20269..22881)
                     /gene="pepN"
                     /locus_tag="MOX77_000201"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000193787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase N"
                     /protein_id="HCA3355884.1"
                     /translation="MTQQPQAKYRHDYRAPDYQITDIELTFDLDAEKTVVTAISQAVR
                     HGAPDAPLRLDGEDLTLVSIHVNDAPWTAYKEEEGALIISDLPERFTLRIVNEISPAA
                     NTALEGLYQSGDALCTQCEAEGFRHITWYLDRPDVLARFTTKIIADKSKYPFLLSNGN
                     RVAQGELENGRHWVQWQDPFPKPCYLFALVAGDFDVLRDTFTTRSGREVALELYVDRG
                     NLDRAPWAMTSLKNSMKWDETRFGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKYV
                     LARTDTATDKDYLDIERVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDL
                     GSRAVNRISNVRTMRGLQFAEDASPMAHPIRPDKVIEMNNFYTLTVYEKGAEVIRMIH
                     TLLGEENFQKGMQLYFERHDGSAATCDDFVQAMEDASNVDLSHFRRWYSQSGTPIVTV
                     KDDYNPETEQYTLTISQRTPATADQAEKQPLHIPFAIELYDNEGNVIPLQKGGHPVNA
                     VLNVTQAEQTFTFDNVYFQPVPALLCEFSAPVKLEYKWSDQQLTFLMRHARNDFSRWD
                     AAQSLLATYIKLNVARHQQGQPLSLPVHVADAFRAVLLDEKIDPALAAEILTLPSANE
                     IAELFEVIDPIAIAQVREALTRTLAAELADEFLAIYNANHLDEYRVDHGDIGKRTLRN
                     ACLRFLTFGETELANTLVSKQYRDANNMTDALAALSAAVAAQLPCRDTLMQEYDDKWH
                     QDGLVMDKWFILQSTSPAENVLETVRSLLKHRSFSMSNPNRIRSLIGAFAGSNPAAFH
                     AQDGSGYQFLVEMLTDLNSRNPQVASRLIEPLIRLKRYDDKRQEKMRAALEQLKGLEN
                     LSGDLYEKITKALA"
     gene            23307..23501
                     /locus_tag="MOX77_000202"
                     /pseudo
     CDS             23307..23501
                     /locus_tag="MOX77_000202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460211.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DinI-like family protein"
     gene            23898..24599
                     /locus_tag="MOX77_000203"
     CDS             23898..24599
                     /locus_tag="MOX77_000203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000480169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1076 domain-containing protein"
                     /protein_id="HCA3355885.1"
                     /translation="MFLTFPNVAITRDNRIDKLSENDLELIRDTAIQNGGRKIQVQLR
                     DLLYEVSNRAVEGDNNTFKVSFSTTDRAMFRERHIEWQGNAIRLERQLNTGLNVSRGN
                     FLNMSTTSFSNNSQELAAHSSPGAPAIFDTSNKQQLVDKIDLCSFSPNVDELSCTEDN
                     LTCPVMLVVPEKGVFVKTGPESNICQLFDETALIQLIIDGATHPVSRAPLSLDMIINK
                     NECYFDTTKGNFIIP"
     gene            complement(24731..24936)
                     /locus_tag="MOX77_000204"
                     /pseudo
     CDS             complement(24731..24936)
                     /locus_tag="MOX77_000204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015364430.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
     gene            complement(25521..26039)
                     /locus_tag="MOX77_000205"
     CDS             complement(25521..26039)
                     /locus_tag="MOX77_000205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000421109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HCA3355886.1"
                     /translation="MELKNVTRYIPDDPDYDNSFLYFRSEDGQDFYESLSKFTKKYKL
                     CIDSENIIRSVSEDVSRLYPAGFSVVEVNKLPAGFNIYGDWKYSNGTVLAVPVDYQAK
                     AETTRQKLLDAANSTIADWRTELALGEIGDDDKDSLTKWMAYIRALKTLDLSGVKDSA
                     TFTEIRWPELPQ"
     gene            complement(26054..27565)
                     /locus_tag="MOX77_000206"
     CDS             complement(26054..27565)
                     /locus_tag="MOX77_000206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001681975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCA3355887.1"
                     /translation="MAKNDFKPFATGKGANVTSQPDWEALPALLSGFTAGKASSAQVN
                     KALRQASFIAAALAQYTASKSGKDVLDDGDLSGFIAKMSAAFGKDFQTLDATLTALAG
                     LATGADKLPYFTGNDTAGQTDLTSVGRDIIGKASIADILTYLGLGETINLAKNAVPAT
                     RRVNSKPLTGDITLWASDVGAISADAVGEITDNGTMASANAPGWWKVAVSNSDTVVDF
                     PTYPGGSKLYSYGYLFVEKIGDVWFQHYYAHIGANAKRQDWGTVPNTSRPWVIDYNTA
                     NKPSASDVGALPITGGRLNGPLSIGTDNALGGNSIVLGDNDTGFKQNGDGILDTFANS
                     QHTVRVAPGEMQVLGAIRAGDAKRMTMTSSNNSVLNAQFHLWGDGNRPTVIELDDDQG
                     WHLYSQRNTDGSIQFVVNGQVIPDNYGNFDARYLTSGNVYTKGESDNRYVQNIQRGAP
                     VWPGKVDEYGPAEAPAGCFLTQARHDPTTAYGVTFAYRPLQMWVGNGWRTING"
     gene            complement(27565..28245)
                     /locus_tag="MOX77_000207"
     CDS             complement(27565..28245)
                     /locus_tag="MOX77_000207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016239891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2612 domain-containing protein"
                     /protein_id="HCA3355888.1"
                     /translation="MSKYTDLITNYHATKPKFVEHIDLVTRPLAETSAAINGLISAFD
                     IDYATGIQLDILGQWIGLSRVVSQPISGVYFSWDTDGLGYDQGVWQGPYDPDSGYTSL
                     SDETYRIVLKTKIAINNWDGRNDSLPPILDAALDGSGLKMQIVDNQDMTIGIWVFPET
                     DISSVSLELIAAIRQGYLTVKAAGVWGGSIEIPSVETPSEGNRFFGFDMDNEYISGFD
                     AGSWGTLL"
     gene            complement(28242..29441)
                     /locus_tag="MOX77_000208"
     CDS             complement(28242..29441)
                     /locus_tag="MOX77_000208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001197067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
                     /protein_id="HCA3355889.1"
                     /translation="MALNLDTLGLSATVTAEGISAPDYQTILDTLTSYFQQIYGSDAY
                     LEPDSKDGQMVALVALAIHDANNTAISVYNCFSPATGYGAALTSNVKINGIARKGATN
                     STVDLLLTGTAGTTITNGTVKDTNNVIWRLPDSVVIGVDGTVTATAICSKSGAVAAPA
                     GTITTINTPTRGWTSVTNPAAATVGAPAETDAELRIRQGQSVAIPSITPFEGVDGAIA
                     NIAGVTRHKLYENDTGKTDGNGLPPHSISAIVDGGDVTEIARTIRGNKGQGVRTWGKT
                     SVTVPDKYGNPHIISFSRPTDVPVYGKITLKVFAGYTSQIGVQIQQAVADYINRLMIG
                     DQVLLSRIYSPANLGVVSGGNARYYDIQELLIGKSPETVDAANINIAYDESASCKPEN
                     IIITVAA"
     gene            complement(29442..29795)
                     /locus_tag="MOX77_000209"
     CDS             complement(29442..29795)
                     /locus_tag="MOX77_000209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355890.1"
                     /translation="MRYRREDTEGDYTFGSGDDTWLINSPEAVAQAVKTRFALWYGQW
                     FLDKTEGTPWIQSVLGKQKPETYNLAIRKRILETRGVKSILSFNTTVNTTTRRVQFFA
                     EIDTIYGTTTVTSEA"
     gene            complement(30036..30791)
                     /locus_tag="MOX77_000210"
     CDS             complement(30036..30791)
                     /locus_tag="MOX77_000210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001685627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HCA3355891.1"
                     /translation="MPVSLSSQLGSKEQADTRLVGSVMSALRVSMPGIVQSFDPDTVT
                     AVVQPAIKGYEPDSNGVSQSTTLPLLVDVPVVFPRGGGCTLTFPVKAGDECLVIFADR
                     CIDFWWQNGGVQEPVDDRVHDLSDAFCIVGPQSQAQKISGISTSAAQLRTDDGAAFVE
                     VAAGHNVTVKTPGALTATAEGGTTITSPIITLNGDVTINGNLSQGMGEGGGSATMLGP
                     VTVTNDVKAGGKSLMTHTHSGVQTGGGNTGAPN"
     gene            complement(30850..31278)
                     /locus_tag="MOX77_000211"
     CDS             complement(30850..31278)
                     /locus_tag="MOX77_000211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001144794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355892.1"
                     /translation="MPVMHNCFLELARESLQHNGEQWTRNAISRSYYGMYHSALRITN
                     NLTPTHDTDGERLPGGSHMRLYTAFCNGEAAKVNGVDVDKVRKIGIKLKMLHAQRVNA
                     DYRLERKINRITAISALQDAEEIDALVDRMMNNPDDSLTA"
     gene            complement(31278..32009)
                     /locus_tag="MOX77_000212"
     CDS             complement(31278..32009)
                     /locus_tag="MOX77_000212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000050472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355893.1"
                     /translation="MSLAQPKSGELLEILGPSLTQGENLLSEFEIHAVIRDARNVPEY
                     YQGLSIEGLAKLVLGEVEEGCALCEKSLAIAPDDSVSFCNYTIALRNKGYHVKQYEII
                     KRAINSRNPRILSEVAINAAYWVDLDLLKKVMPMLNAMEVAKADDLLKCNESLDYLID
                     HENHSHDLKAIGQLMMTIAEKYRLRLAGAHAFYVMNELNTFFVEIKTDDPALLSKVNN
                     DLANELIAAGLENSECVGCFQAGDF"
     gene            complement(32204..32539)
                     /locus_tag="MOX77_000213"
     CDS             complement(32204..32539)
                     /locus_tag="MOX77_000213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000826019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355894.1"
                     /translation="MKRLLLAALLVCISFTSFADTGCGPFTINWKAQDGLARINGQKP
                     ETQKITFLKQKGDYDNVNIQWMVPGNGRWLGMDFVARNGKPILNVEVIRKNMDEPREF
                     WTYDCRKVK"
     gene            complement(32536..33567)
                     /locus_tag="MOX77_000214"
     CDS             complement(32536..33567)
                     /locus_tag="MOX77_000214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000042292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355895.1"
                     /translation="MSKNWMRHFELLLVDDKGDGIKISELKVTFNIQKMPATIFNGFV
                     GNFKVYNLSPTTQNRIMQKEFSRIQVIAGYKGQPDATGNYPDENVGMIFNGDIRFTVT
                     GKDNATDSWIMLQCIDSWEGHLNASVKTTVAAGWKYSDLFSLGMKSFGPYGIESGAVP
                     DMPETVFPRGRVVYQSTARLMNHIAGQCNAYWWYENNQVNIVPEDNYIGVATVLNANT
                     GLIGRPQQTMGAGVNVRCLINPNIKLGGLIRLDQASVYRTSLSNDQIAQSPARLDESE
                     SDGNLYVNGLPGMSQPASINTDGDYIVGSIDYTGDTRGQAWYMDLLCLAKDGKELLNS
                     KGIDAAKYT"
     gene            complement(33570..33872)
                     /locus_tag="MOX77_000215"
     CDS             complement(33570..33872)
                     /locus_tag="MOX77_000215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016247448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355896.1"
                     /translation="MEAVEIPLVADNQTFATTINGTVYHLSVIWRGEYWVLDLADSNG
                     SAIISGMPMITGADLLAQYRYMNLGFSLVVLCDVAGQENPTQFDLGTFSHLYVFTE"
     gene            complement(33876..34526)
                     /locus_tag="MOX77_000216"
     CDS             complement(33876..34526)
                     /locus_tag="MOX77_000216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000346976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355897.1"
                     /translation="MDFLSVLLQQRTRSIGIIIPDVVITEKHTDALEITEHPVEQPTN
                     AGASGEGAGYISEHAFRRPSEVVMETGFSGGGSLLDFADTSAIGLSLGLSPKELYQEL
                     LNLQRDRIPFDVTTGKRIYNNMLIKTLEVTTDKSSENVLLATLTLREVIITSTQSIRV
                     ASKNNMTEGVGTSAVQNTGTKTTVPPNNSILKSLPQMAQKGVTTVDGYLSNLFLGR"
     gene            complement(34526..36478)
                     /locus_tag="MOX77_000217"
     CDS             complement(34526..36478)
                     /locus_tag="MOX77_000217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000990879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase catalytic"
                     /protein_id="HCA3355898.1"
                     /translation="MNAETIKDFLVSLGFGIDEAGYEKFESVLAGVTANAIKTGLAVE
                     GAALSVVAFTAKIASGLDNLYWASQRTGATVQGIQSIGYAVSQVGGSVDAARTSLESL
                     SRFVRNNPGAEGFLNRLGVQTRDASGNMRDMAAIFTGVGQELSSMPYYRANQYAQMLG
                     IDENTLMAMRRGLGGFSGQYSAMAKAIGFNADEAAKSSNRFMTSLREFGAMAGLARDK
                     IGSNLAGGLAGSLDTLRRHILDNFPRIEQTLTKAIKGILTLGDIIGRVAFRIVEGVGD
                     IIDWWGKLDKETKTLIEVIGGLVVAMRILNSTFWMSPVGLITGLIVAFGLLWEDYKTW
                     KEGGNSLIDWEKWQPAIDKAKDAMVWLRDHLLELKDSIGGWKTSLELLATFIAGAWIS
                     KVTGAFARLAGIPMPPWLKGWMAYAAYLYDDRENIVASAQSSIDYAKQNIGDGMRALG
                     IDTDFGRNPHTVKGANIQPDIPGAEPVQHAQSAKRTLADRNNNPGNIRPVGGNGFRFF
                     ESALQGWEAMKNQLMRYFTGKTTGRALQTIQDIVSTWAPAGDNNDPKKYAQDVAKWMG
                     VSPNTVLNLANPETMAALMQSMARKEGYSNWNSPLAYQAAGGSLNQQTVINVHGVNNP
                     QEAANLIADKQGAVNARAVQQLKGPA"
     gene            complement(36656..37108)
                     /locus_tag="MOX77_000218"
     CDS             complement(36656..37108)
                     /locus_tag="MOX77_000218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000389047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355899.1"
                     /translation="MECSVKGHDYRVAKLSVFDQLKVTRKLLPVLAGMMSDFGGIRSL
                     LPADGKIDSAKFDALKPVFETLLPRIAEELSSLTEEDTNAIIHPCLAVVSRKHMGGWA
                     PVFNSGQLMFDDIDLLTMLQLVARVVADSLGNFLQGLPTNGTPTPPAE"
     gene            complement(37112..37552)
                     /locus_tag="MOX77_000219"
     CDS             complement(37112..37552)
                     /locus_tag="MOX77_000219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3277 family protein"
                     /protein_id="HCA3355900.1"
                     /translation="MATYSFMDVTASISGPTGEIDLGYGSASSEEGITVAMGGPKNTM
                     TIGADGEVMHSLHADKSGTVTVNLLKTSPTNKKLSLAYNAQSQSSGTWGNNVIVIRNK
                     VSGDIITARSVAFQKQPDNANAKAGNTMPWVFDCGKIDQVLGEF"
     gene            complement(37564..38709)
                     /locus_tag="MOX77_000220"
     CDS             complement(37564..38709)
                     /locus_tag="MOX77_000220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001135544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3383 domain-containing protein"
                     /protein_id="HCA3355901.1"
                     /translation="MPQGLPVSNVVNVDVIIGPRAATGRNFGSLLILGTSTVIPVKER
                     LRLYSSKEDIGSDFGVDSPEYEAATVYFSQSPRPKEVYVGRWAKTLATGEAGAAEKLM
                     DAVNAVMGYTNWYGLGIADKEDIADDDWLKVAAAVEASGVSRILAITTSDPATFDATS
                     TGDLSYKLKAAKYGRTFVQYSSSSKYAALSAFGRAFTVNFNGSNTTITLKFKQEPGIT
                     YETLTTDQAAALDAKNCNVFVYYQNDTAILQQGVMSSGDFFDERHGLDWLQNYVQTNL
                     YNLLYTSTTKVPQTDAGVTRLLSNVEQSMDQSVTNGLVAAGVWNGGPIGQLDSGDALT
                     KGYYVYAQPISEQAQADREARKAPVIQVSCKLAGAVHFADVQINVVR"
     gene            complement(38713..39276)
                     /locus_tag="MOX77_000221"
     CDS             complement(38713..39276)
                     /locus_tag="MOX77_000221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000503648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355902.1"
                     /translation="MEDFPLSNNSSTEPGWLTPVSGDPDYDEALDRLLSQWVRNVSGL
                     PTGMVRPRWQKDQPPLLPAETNWCAFGVTGWPIDNSPAFTNQTEEGAQLWRHETFECM
                     ASFYGPAGMTFASRFRDGISVAQNNAELNALGLSMGDYTGLTPFPELINQQWVRRYDI
                     TVRLRRKVVREYGIKSLVDAPVSFFGD"
     gene            complement(39251..39640)
                     /locus_tag="MOX77_000222"
     CDS             complement(39251..39640)
                     /locus_tag="MOX77_000222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001687820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head-tail adaptor"
                     /protein_id="HCA3355903.1"
                     /translation="MPTLDVTDVLFDPDFCDFNLWVTRRVQTVDEDGIGSDSEVKTQF
                     AGVVTVDRSLENRRMQSGQVISGAILIVTTERLTQGQTGRDADIVTYQNRDYRVTFVD
                     PYTAYGAGFVQAHCELLPFDGGFPVEQ"
     gene            complement(39627..40181)
                     /locus_tag="MOX77_000223"
     CDS             complement(39627..40181)
                     /locus_tag="MOX77_000223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000008741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355904.1"
                     /translation="MSFKSGVTTRVDNAQAILDALKSLTKKDVLVGIPAEDSDRDDVS
                     FGNAGIGYINEYGSPAQNIPPRPHLVPGVKSVEDQTMPQLKAAAQAALDGNAAGAERA
                     LNRAGTVAARGVKNHIKAANFTPLADSTVEARARRGRKGAKAELARRAAGESPGTTLA
                     KPLYDTGKYLASITHVVRDKDADS"
     gene            complement(40178..40585)
                     /locus_tag="MOX77_000224"
     CDS             complement(40178..40585)
                     /locus_tag="MOX77_000224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016244735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4054 domain-containing protein"
                     /protein_id="HCA3355905.1"
                     /translation="MPKNQSLPTVSDFRRDFPQFADPARYPEAQIEFRLNLADELLSE
                     NVTGKKLFPYFAELFVAHYMTLWAADSRAMLVGGPGGSTNGVQSSKSVDKVSVSYDTS
                     ATLNPDAGFWNNTRYGAEFYQLITMFGAGGRQL"
     gene            complement(40551..40919)
                     /locus_tag="MOX77_000225"
     CDS             complement(40551..40919)
                     /locus_tag="MOX77_000225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001040698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355906.1"
                     /translation="MAKEKLVTIHVHTPFTLTLGDQSKQEFGRGRHNVPEEVASHWFT
                     RAHAELSESGSNETDDQQPVIDSLQAQIADKDKLIADLKDALLKLQEQNDSLQAQITS
                     ARTGGNGAKDAKESKPANSK"
     gene            complement(40961..41902)
                     /locus_tag="MOX77_000226"
     CDS             complement(40961..41902)
                     /locus_tag="MOX77_000226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2184 domain-containing protein"
                     /protein_id="HCA3355907.1"
                     /translation="MITFDQATVDSSGAFLIGELERLDQGLNLPLVGYTWTRDIQLRE
                     DVSIADDISSWTNTSFGVAGSGANPNGKNWVGKDSTAIAGVNVDISKDGNPLNLWGME
                     LGWTVVELAAAQQVGRPIDTQKYDGMQLKWQMDNDEQVYVGDEALGLKGLTNLVGVTL
                     NNATKTWANSTNDEILDSVNSILSNAWAASGYSVVPSDLRIPPEQYSLLASRKVSEAG
                     NQSLLTYLAVNTIAFHQNGVPLEIKAVKWLKGRGVGGKDRMVAYTNDKKYVRYPLVPL
                     QSVPVQYRGLYQIATYYGKLGAVEPVYKETLSYVDGI"
     gene            complement(41914..42411)
                     /locus_tag="MOX77_000227"
     CDS             complement(41914..42411)
                     /locus_tag="MOX77_000227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016244737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355908.1"
                     /translation="MTAYLYRMPVGIAGAISRPQDLTVEPVILKSDNAFAAYGLAGKY
                     DADGFFVPLAEGDTVDKVKGIYVRPYPTTSQPDMVRQVGTDKNFPGDAMKRGYMTVNV
                     GTDASSVKKGGVVYIVVSADASIPVPLGGITAAEVTGKTAALPDAFFTGAGDANGNAE
                     ISWKI"
     gene            complement(42416..43648)
                     /locus_tag="MOX77_000228"
     CDS             complement(42416..43648)
                     /locus_tag="MOX77_000228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2213 domain-containing protein"
                     /protein_id="HCA3355909.1"
                     /translation="MKYFFNTRLGETRYQLADGSLLCRDVPIGRTGKQLYGAADLPNL
                     KPDKFGEIVVTRSPEQVFHPATLASFEGMSITILHPEDENGNVRLVNPENWKELAVGH
                     LQNVRRGTGEQSDLMLADLIVKDESAIQLIEDGLREVSCGYDAEYEQAEPGKAEQVDI
                     TGNHVALVPKGRAGNRCAIGDRDTMANQKKSWWTRMRTAIKTGDSDTMNELLDSAPAA
                     VTGDEGDLPGGVNLNINLSPQQPLPDKKPEMGGDVTGDGEDDIKTLLKALLAKLEGTA
                     TGDNADTPDDKDKKDPTGDGEDNEEETTITGDSAYRAEVIIPGIDLSRKVKPTAFKRD
                     VLAAADKTLVRQVVGDADIRKLPKQSVDMAFNAVSEIAKGRNTRSTTGDAQRPGMGMT
                     SIASLNKQNADFWSNRKG"
     gene            complement(43663..44400)
                     /locus_tag="MOX77_000229"
     CDS             complement(43663..44400)
                     /locus_tag="MOX77_000229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000184960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head morphogenesis protein"
                     /protein_id="HCA3355910.1"
                     /translation="MSTNRQSRQAEIRYRTSLRQIARAVGDIVNGHYDGSNDSVTEIM
                     EALERYSEIITPWATKVAENFTADIVRKNDEQWRKHSKTISRELRNLVSNAPPGQVMK
                     SIVAEQVKYIKSLPLEAADRVYDIQNRAIEAVVTGGRAEHFAKEIAASGDIAKSRADL
                     IARTELGRATGALDQARALSIGSNGYIWRTAEDGDVRHSHREMEGKFVEWGRPPTLDG
                     MTGHAGELPNCRCYKEIVFPNPHSYLA"
     gene            complement(44285..45754)
                     /locus_tag="MOX77_000230"
     CDS             complement(44285..45754)
                     /locus_tag="MOX77_000230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000113511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1073 domain-containing protein"
                     /protein_id="HCA3355911.1"
                     /translation="MARNKQASRRTVQATADGYENFVTRVGMQTPNQHSASTYRANFT
                     SRNRMLVEWSYRSSWLIGEAVDAIPDDMTRKGIRITSEIDAKDRGTLEAQLDQLQIWD
                     ALNDVLKWSRLYGGAVGFIMIEGQAPMTPLRLETIGEGKFKGILPLDRWMINPVLTRR
                     IKEMGPNLGKPELYDVVTTATGIPAWRIHHSRLIRFDGVTLPFQQKMTENEWGMSVVE
                     RIWDRLTAFDSATVGAAQLVYKAHLRTYKVEKLRELIALGGPAFEALLKNIDLIRQFQ
                     SNEGMTLMDAKDTFETHQYSFSGLDDILSQFAEQISGAVGIPLVRLFGQSPKGFSTGD
                     ADLANYYDRVSSLQERRLRLPVRRVLDIMHRSELGKPLPDDFTFEFNPLWQMSDVDRS
                     TVAVNTTTAIVNALDAGLMTTKAAMTDLRENSDVTGIGASITDEDIENAEDEAPPGIG
                     ELVDKPPEPTGGDPISNEPTADSAGGRGYRKWALRWFKR"
     gene            complement(45754..47157)
                     /locus_tag="MOX77_000231"
     CDS             complement(45754..47157)
                     /locus_tag="MOX77_000231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000200750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PBSX family phage terminase large subunit"
                     /protein_id="HCA3355912.1"
                     /translation="MTSTPISRPTLNPALRNFWTTQARNKVLYGGRSSSKSWDAAGFA
                     IFLANKYSLRFCCARQIQNKIEESVYTLLKIQIDRFGLRHRFRILNNKIINRVTGSEF
                     VFYGLWRNIEEIKSLEGIDVLWLEEAHALTEYQWKILEPTIRKEGSECWFIFNPGLVT
                     DFVWRNFVVDPPEDTLIRKINYDENPFLSDTMLKVIDAARRRDPEGFVHVYEGVPESD
                     DDAAIIKLSWIEAAVDAHKVLDFGPEGRKRIGFDVADSGADKCANVYRYGSVIYWADE
                     WKAKEDELLKSCQRTYQAAMERDADIVYDSIGVGASAGAKFSEINDDRKRENAYARRV
                     NYQRFNAGAGVHEPDDEYNGIPNKDFFANLKAQAWWLVADRFRNTFNAINNGEQYLVD
                     ELISIDSRCPLLEKLKLELTTPHRDFDRNGRVMVESKKDLAKRDIPSPNVADAFIMAF
                     APTDTSLDIWEQLGRQA"
     gene            complement(47123..47875)
                     /locus_tag="MOX77_000232"
     CDS             complement(47123..47875)
                     /locus_tag="MOX77_000232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355913.1"
                     /translation="MAKPDWEAIETAYRAGIMSLRDIGALYGVTEGAIRKKAKKLEWV
                     RKNITQVRKNGTQKNTVRTTRRPASSGAVQKHSRPESGPPADTKPEAVRKKVVTNHPP
                     FQPGNQYALKHGGYARRLLLKDEVVEDARALTLEDELFRLRANNLMAAENIGRWFTLL
                     EDAEEEQQRKILMDNISAAEKAMMRNTVRIESIVGTLATVSKIHADTDYRLAATDKVS
                     LEADRLRRDAGIDDGNGERDLNDFYADIQTDA"
     gene            complement(47965..48192)
                     /locus_tag="MOX77_000233"
     CDS             complement(47965..48192)
                     /locus_tag="MOX77_000233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001070544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355914.1"
                     /translation="MNQAIEQIIHSSLNKNEPGAGVGSSVTANDIIEGVRPYYQAASG
                     AEKLSIVERLNKLKVEPGVPIPSNIEQLLSN"
     gene            complement(48289..48666)
                     /locus_tag="MOX77_000234"
     CDS             complement(48289..48666)
                     /locus_tag="MOX77_000234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000495545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355915.1"
                     /translation="MFTVKTIINGVTHICEQPSISIARAGSETFADTLKLTHNSACPD
                     FAYWLPAIYEDPEMTKALQEEELVISDRTDVLDTDAIAIIIEEYPSENFPGAGDGCRY
                     QFIYPGDQVYVMNSHGSTIETVK"
     gene            complement(48709..49247)
                     /locus_tag="MOX77_000235"
                     /pseudo
     CDS             complement(48709..49247)
                     /locus_tag="MOX77_000235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001050879.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2514 domain-containing protein"
     gene            complement(49244..49858)
                     /locus_tag="MOX77_000236"
     CDS             complement(49244..49858)
                     /locus_tag="MOX77_000236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 19 protein"
                     /protein_id="HCA3355916.1"
                     /translation="MNQQQFQQAAGISAGLSARWYPYITAAMSEFGITAPLDQAMFIA
                     QAGHESAGFTVLKESFNYSVEALKKTFGKRLTPYQCEMLGRIDGRQVAHQPQIANLVY
                     GGRMGNKDAGDGWKYRGRGLIQITGLENYTRCGVALKLDLVANPGQLELERHAARSAA
                     WFFVTKGCLKYSGDLVRVTQIINGGQNGFGDRRERFEKAKSVLV"
     gene            complement(49858..50139)
                     /locus_tag="MOX77_000237"
     CDS             complement(49858..50139)
                     /locus_tag="MOX77_000237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004899663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HCA3355917.1"
                     /translation="MVANDPSAVLNAVICGVIVIVLMFYRRGDATHRPLISLLAYVMV
                     LVYASVPFRFVFGLYESSHWLVVMVNILICAAVLWARGNVARLVDALRH"
     gene            complement(50126..50515)
                     /locus_tag="MOX77_000238"
     CDS             complement(50126..50515)
                     /locus_tag="MOX77_000238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001294874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HCA3355918.1"
                     /translation="MSEPVSSATVLAGGLMGASVFGLATGTDYGVVFGAFAGSVFYVA
                     TATNIGRIRLVAYFITSFIVGVLGAGLIGTKLAAITHYEKPLDALGAVIISAMCIKFL
                     TFLNSQDLNTLFSILSRIRGGGSDGSK"
     gene            50732..51181
                     /locus_tag="MOX77_000239"
     CDS             50732..51181
                     /locus_tag="MOX77_000239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HCA3355919.1"
                     /translation="MKNTALGKFIFIVGTALLLGGCSGMVMPPYATHGTSVGIIAPAG
                     GYSEWHTDSRNHTTGDSHSQSQGNCTQSEDSQLSENGLTRTHQSNCNTRSQTHSSSTS
                     KTRSSSVGFSVGGPVGASIGLIKQMESMNRAPANDMSSNEMFKNFGF"
     gene            complement(51317..51442)
                     /locus_tag="MOX77_000240"
     CDS             complement(51317..51442)
                     /locus_tag="MOX77_000240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355920.1"
                     /translation="MKMHNDPHSMDSQSIFAGSQLLPMEKTSHLALSVGFRSHLA"
     gene            complement(51841..52638)
                     /locus_tag="MOX77_000241"
     CDS             complement(51841..52638)
                     /locus_tag="MOX77_000241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitermination protein"
                     /protein_id="HCA3355921.1"
                     /translation="MNLESLPKYFSPKSMMPGAVPCGITSDTLTITDVMASLGLLTAK
                     AAVGIELYLAKAGVLSSENIIAYIRQLAEQRAERHGALRKMEKGKRSKFLDTMARYVF
                     RDYSLSAASLVTCSSCHGAKLIDAEVFTNKVTYPDGKPPKWVKDTKGISPSDWEVWKS
                     VREQVRVVCKACDGKGQVKNECRCRGRGEILDKKKSELQGVPVYKKCPRCKGRGYPRL
                     KDTEIFKALGVTEMVWRYNYKLFFDRLVEHCHIEESYAEKVLGNVTR"
     gene            complement(52628..52774)
                     /locus_tag="MOX77_000242"
     CDS             complement(52628..52774)
                     /locus_tag="MOX77_000242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001617856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlcG family protein"
                     /protein_id="HCA3355922.1"
                     /translation="MKPELIEILRMRWLRLRIYRYRGSFPVAYRILRNYVRIEAKREH
                     RNES"
     gene            complement(52771..53382)
                     /locus_tag="MOX77_000243"
     CDS             complement(52771..53382)
                     /locus_tag="MOX77_000243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein NinG"
                     /protein_id="HCA3355923.1"
                     /translation="MAKLPRRKCANKECRQWFHPIREGQIVCSYQCASTVGKEQTRKA
                     REAAQRKAQSLQRAAEKKERAAWRQRKAAVKPLKHWIDLTQRAVNDICRETELAEGLG
                     CISCGTKTAFAWHAGHYRSTAAAGHLRFTRFNIHLQCDVCNVYKSGNIEAYRAALVER
                     YGEAAVLALENNNTPHRWTVEELKEIRLAALSDLRALKKLEAA"
     gene            complement(53591..54193)
                     /locus_tag="MOX77_000244"
     CDS             complement(53591..54193)
                     /locus_tag="MOX77_000244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1367 family protein"
                     /protein_id="HCA3355924.1"
                     /translation="MAHELQLIKQSSGILIPATPETSDILQSKIKLGAVLVAEFRQVR
                     NPAFHRRFFALLNLGFEYWEPTGGAISANERKLVNGYAKFLAAYGGNESALLDAAEQY
                     LEQIANRRVTNGISLCKSFDAYRAWVTVEAGHYDAIQLPDGTLRKHPRSIAFSSMDEV
                     EFQQLYKSALDVLWRWILSRTFRTQREAENAAAQLMSFAG"
     gene            complement(54528..54767)
                     /locus_tag="MOX77_000245"
     CDS             complement(54528..54767)
                     /locus_tag="MOX77_000245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001217670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinI family protein"
                     /protein_id="HCA3355925.1"
                     /translation="MRIELVISRTKQLPEGAVPALEKELITRLQNQYENCNLTIRRGS
                     QDGLSIVGAADGDKKRIQSILQETWESADDWFYAY"
     gene            complement(54952..55449)
                     /locus_tag="MOX77_000246"
     CDS             complement(54952..55449)
                     /locus_tag="MOX77_000246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000963896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system death-on-curing
                     family toxin"
                     /protein_id="HCA3355926.1"
                     /translation="MAIEYVEGVNYLSIEDIVYINRSLIEIQTPNEPIGVLNPNNLSS
                     SQSRPSTIRYYEQTDDMFRLSAVLIESLIQNHPFANANKRTAMMAGYVFLLLNGYELT
                     APSDEVVTIAEGLARKDYAVDDLENWLCHWSREYDSRTLCETGGNMIQALVATSRYIR
                     IKSNE"
     gene            complement(55460..55639)
                     /locus_tag="MOX77_000247"
     CDS             complement(55460..55639)
                     /locus_tag="MOX77_000247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016156674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355927.1"
                     /translation="MGHALKKADRLYIPPRDKSMVAKPRAAISKACSHTGQVKNAFEF
                     GFARYEKAMEELSKV"
     gene            complement(56485..57057)
                     /locus_tag="MOX77_000248"
     CDS             complement(56485..57057)
                     /locus_tag="MOX77_000248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001751779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF550 domain-containing protein"
                     /protein_id="HCA3355928.1"
                     /translation="MTTITKEWLQQTIAEFENTRDDIPFGLSDDDAKILIVLKRALAS
                     LEREQVRHEHADWSDATFGDVGPIGPLKHLSKEALETAAELGDLSEWADMQFLLWDAQ
                     RRAGITDEQIALAMVEKLAVNKKREWPEPKDGEPRLHIKEQPVPVVPEECPEEIRDLM
                     ASHSDALFNDDDAQEIWNACRAAMLNGGKS"
     gene            complement(57061..57534)
                     /locus_tag="MOX77_000249"
     CDS             complement(57061..57534)
                     /locus_tag="MOX77_000249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000840609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HCA3355929.1"
                     /translation="MESQSILDMCCGSRMFWFNKRDERAVFADIRAEEHILCDGRRLV
                     ISPDLIADFRALPFADASFPVVVFDPPHLERVGQTAWMGKKYGRLNKKTWRSDLRAGF
                     KEAFRVLRAHGVLIFKWNETQIPVSQILALTDVKPIIGQRTGKNDKTHWIIFVKD"
     gene            complement(57534..58058)
                     /locus_tag="MOX77_000250"
     CDS             complement(57534..58058)
                     /locus_tag="MOX77_000250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000065106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ead/Ea22-like family protein"
                     /protein_id="HCA3355930.1"
                     /translation="MSNIDKRALREVAERATPGNWRRTSSLFNGITVTPFSLCGEEVT
                     LAHTVEKRDAEFIAAANPATMLALLDELETKEEQRANWFRMAQKLGEDLDTAERLIAE
                     LDQRLIEYAGIATREARRVAELEARKVNLSKLSVGEVMHMTGFSRDYAEGWCAGNDNA
                     IHEIRTAGIKVKES"
     gene            complement(58055..58402)
                     /locus_tag="MOX77_000251"
     CDS             complement(58055..58402)
                     /locus_tag="MOX77_000251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF977 family protein"
                     /protein_id="HCA3355931.1"
                     /translation="MARPKTHSERMIILERIIGLVKEQGRITTNDVVAIFGVHRTTAE
                     KYLRIALERGGFIRHGRCGIFRDQRAVIDYDLRRYSSSQVTGFSALPVLEKSPVMQVY
                     GASKMSINKGGAQ"
     gene            complement(58413..59162)
                     /locus_tag="MOX77_000252"
     CDS             complement(58413..59162)
                     /locus_tag="MOX77_000252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HCA3355932.1"
                     /translation="MKNVIGTGSALDRLKRIIPASVQPKFSTADEWRAWQEAEGRKRS
                     EELDRMNQKSRTEKIFGRSGIQDLHRSCTFANYEVSGEGQRKAYTMAKSYAQNFGSGF
                     ASFVFSGGPGTGKNHLAAAIGNHLLAGGHSVLVVTIPDLMLRVRECYDGGQSEASLLD
                     DLCKVDLLVLDEVGIQRGSSGEKVILNQVIDRRLSSMRPVGVLTNLNHEGLLDSLGAR
                     VIDRLQMDGGMWVNFDWESYRKNVSHLRIVK"
     gene            complement(59165..60148)
                     /locus_tag="MOX77_000253"
     CDS             complement(59165..60148)
                     /locus_tag="MOX77_000253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication protein"
                     /protein_id="HCA3355933.1"
                     /translation="MSMSNTAEIYKFPAPIPTQQECRMADLENGYLRLANQIQDALCI
                     VELSGREFRVLNAIIRLTYGWSKKSDRIANSLIADKTTLKVKHVSEAVLSLAYRNIII
                     LRRIGQTRYIGINTNLDKWAYSKPHCSKCPVSFPDDEIATWIISVPETRDSYTRKGGR
                     ASPKTGIVIPENRDSVLPHSAIPENGDSYPRKEGRASPKTGNTKDIIPKTNIKDLTPF
                     NPPKGKVKFDPLSIPVPEWLNAASWNEWVTYRQQSGKPIKTELTVTKAFRLLKECLDE
                     GHDPVNVINTSIANGYQGLFKPKFALNDRRAGRDVNHISAPDKTIPTGFRG"
     gene            complement(60233..60607)
                     /locus_tag="MOX77_000254"
     CDS             complement(60233..60607)
                     /locus_tag="MOX77_000254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355934.1"
                     /translation="MAYQAKRHQPNNHRGYLPMENAIARKLDPPEINPIEIESVLLNR
                     LASVGQKSYAEHMGISESTVSRRKAEGYFCNMAKELAFLGIQAAPPEAVLVSRNYLTA
                     VEILADAGLKAERARPDALGWD"
     gene            complement(60573..60809)
                     /locus_tag="MOX77_000255"
     CDS             complement(60573..60809)
                     /locus_tag="MOX77_000255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000869364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HCA3355935.1"
                     /translation="MKVTVQRKILSVCSQAGLGRRLGRRAQTVNGWFKNKVPGELVVR
                     VARAIDWKVTPHELRPDLYPNPTDGLPSQEASAK"
     gene            60939..61343
                     /locus_tag="MOX77_000256"
     CDS             60939..61343
                     /locus_tag="MOX77_000256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001009036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HCA3355936.1"
                     /translation="MNFGERLQRVLNETGITQSELGRRVGATSQSVNGWCQSGILPRK
                     DILELLPKATGKPLYWFFMEDDDESDVPERLTQGGPTDLNDRQKRLLEIFDQLPTVEQ
                     DRFIELAGTRLQELDDFMAEYQRRRKIEPPSR"
     gene            61632..61832
                     /locus_tag="MOX77_000257"
     CDS             61632..61832
                     /locus_tag="MOX77_000257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000186242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HCA3355937.1"
                     /translation="MTNYGTTTLPRTSVVPGMLVKYQGRTYRASANVGKGLYLFTLFE
                     RLRTTNDEIEVYLNQHGKPATH"
     gene            61923..62219
                     /locus_tag="MOX77_000258"
     CDS             61923..62219
                     /locus_tag="MOX77_000258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001528639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host-nuclease inhibitor protein Gam"
                     /protein_id="HCA3355938.1"
                     /translation="MNAYLTYDRIEAQDWTRHYQQIAREEKESELADDLEKGLSLHML
                     ESLCMDELPRHGANKKAISRAFDDDVEFQERASEFVRYMAETFSRHQIDIESEE"
     gene            62225..63010
                     /gene="bet"
                     /locus_tag="MOX77_000259"
     CDS             62225..63010
                     /gene="bet"
                     /locus_tag="MOX77_000259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage recombination protein Bet"
                     /protein_id="HCA3355939.1"
                     /translation="MSTALATLAGKLAERVGMDSVDPQELITTLRQTAFKGDASDAQF
                     IALLIVANQYGLNPWTKEIYAFPDKQNGIVPVVGVDGWSRIINENQQFDGMDFEQDNE
                     SCTCRIYRKDRNHPICVTEWMDECRREPFKTRDGREITGPWQSHPKRMLRHKAMIQCA
                     RLAFGFAGIYDKDEAERIVENTTYTTDRQPERDITPVSDETMREINDLLITLNKTWDD
                     DLLPLCSQIFRRDIGASSDLTQIEAVKALGFLKQKAAEQKVEA"
     gene            63007..63687
                     /locus_tag="MOX77_000260"
     CDS             63007..63687
                     /locus_tag="MOX77_000260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqaJ viral recombinase family protein"
                     /protein_id="HCA3355940.1"
                     /translation="MTPEIILARTGIDVSNIEQGDDAWHRLRLGVITASEVHNVISRP
                     KSGKKWTDMKMSYFLTLLAEVCTGVAPEVNARALAWGKQYEDDARTLFEFTTDVKVTG
                     SPILFRDEDMRTACSPDGLCSDGRGLELKCPFTSRDFMKFRLGGFEAIKSAYMAQVQF
                     SMWVTGIDAWYFANYDPRMKREGIHHVVVERDDKYMSLFNEMVPEFIEKMDEALKEIG
                     FTFGEQWR"
     gene            63765..64829
                     /locus_tag="MOX77_000261"
     CDS             63765..64829
                     /locus_tag="MOX77_000261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001373762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DGQHR domain-containing protein"
                     /protein_id="HCA3355941.1"
                     /translation="MSKIGDYFFEFPASRGLQGNTVVLMMTVPARALTRVLASDNHGN
                     TLERSQRELNPARAKKFYEYLRTAYEKKEPFIIPPLVGNCDSFIEFEEFGNTNVGVAR
                     FPMDAEIKLFDGQHRAAGIAEFCRTYGEPIHIPMMLTHQLPLKTRQQFFSDINNNVSK
                     PSAAINMAYNGRDKIAQDMVSFLSSHAMFSEITDFEHNVVPAKSDLWISFKPLSDATA
                     KFSGNGDELATSDIYDIWEAWLKLTAIKGIRHGCTPVEYKRDYIQFHAVMINAFGYAM
                     QELLRHRPAHIIVQMIEELVNNSTMSELENFFLISSWSGVCASTEKDRATVIASVASQ
                     KAASVRLIQAITTKSFEVAA"
     gene            64826..65707
                     /locus_tag="MOX77_000262"
     CDS             64826..65707
                     /locus_tag="MOX77_000262"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010989138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Dam family site-specific
                     DNA-(adenine-N6)-methyltransferase"
                     /protein_id="HCA3355942.1"
                     /translation="MRYGSVCSGTAAMPIEEPALRTWRRPFLKWAGGKYSLLPELDRL
                     IPAGKRLIEPFVGGGSVFLNSDKHERFLLADVNADLINLYQMLAVVPDSVIAEAMKAF
                     RHLNDAENYTVIREAFNAQKLNATERAAAFLYLNRHCFNGLMRYNLDGFFNVGWGKYK
                     APYFPEEEIRAFRQKSHACVFMTAGFERTLRLAGDGDVVYCDPPYEPMPGTAGFTNYA
                     SGGFSWDSQVALAESCVAAHQRGAKVFISNSTAPRVIELYERHGFTLHRVNARRSISS
                     KGSTRETANDIVASLGI"
     gene            65713..65952
                     /locus_tag="MOX77_000263"
     CDS             65713..65952
                     /locus_tag="MOX77_000263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4060 family protein"
                     /protein_id="HCA3355943.1"
                     /translation="MKLINRSKQSPVGRRACDIALAAHHEKFGDYGRQKHVTNYTVVV
                     DGVKVPVEVVNRATSYVATAMIGVRKLRNLPAQAN"
     gene            65993..66241
                     /locus_tag="MOX77_000264"
     CDS             65993..66241
                     /locus_tag="MOX77_000264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excisionase family protein"
                     /protein_id="HCA3355944.1"
                     /translation="MSNIIQLTPNKWVSEKVLIAVTGLKPGTITRARKESWMLGREYL
                     HISPDGNPKPSSECIYNREAVDQWIEAQKKNQPGAKTT"
     gene            66286..67578
                     /locus_tag="MOX77_000265"
     CDS             66286..67578
                     /locus_tag="MOX77_000265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3596 domain-containing protein"
                     /protein_id="HCA3355945.1"
                     /translation="MANASYPTGVENHGGSLRIWFLYKGKRVRENLGIPDTAKNRKIA
                     GELRSSVCFAIRMGNFNYVEKFPNSTNLARFGQDRKEITVLELTERWSELKRMEISSN
                     TMSRYESIIKNMLPLIGENKMVSAVTTEDLLYVRKELLTGFQVMKKDHRTQVKGRKSS
                     TVNNYMMLMAEIFQFGTDNGYAKENPFSGINRLKKAKGEPDPLTTDEFIRFIQACGHQ
                     QMRNLWSLAVYTGMRHGELCGLAWEDIDLHAGTIIVKRNLTQTDEFTLPKTDAGTDRV
                     IYLIQPAIDALRNQAQLTRLGRQFEVEVKLREYGQSVIQPCTFVFSPQCVKRGPRTGY
                     HYAVNSINKIWAPIIKRAGIRYRNAYQSRHTYACWSLSAGANPNFIATQMGHTDAQMV
                     YKVYGKWMSEKSAEQVSLLNQALSRYAPSLPQSMVAAQ"
     gene            67773..68975
                     /gene="pncB"
                     /locus_tag="MOX77_000266"
     CDS             67773..68975
                     /gene="pncB"
                     /locus_tag="MOX77_000266"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HCA3355946.1"
                     /translation="MTQFASPVLHSLLDTDAYKLHMQQAVFHHYYDVQVAAEFRCRGD
                     DLLGIYADAIREQVDAMQHLRLQEDEFQWLSGLPFFKPDYLNWLREFRYNPAQVCVTN
                     DNGKLNIRLTGSWREVIMWEVPLLAVISELVHHYRSPNAGVDQALDALESKLVDFTAL
                     TANLDMSRFHLMDFGTRRRFSREVQQAIVKRLQQESWFVGTSNYDLARRLALTPMGTQ
                     AHEWFQAHQQINPDLATSQRAALAAWLNEYPDQLGIALTDCITMDAFLRDFGIEFASR
                     YQGLRHDSGDPVAWGEKAIAHYEKLGIDPLTKTLVFSDNLDLPKAVELYRHFASRVQL
                     SFGIGTRLTCDIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFD
                     LPQVRKAS"
     gene            complement(69056..70489)
                     /locus_tag="MOX77_000267"
     CDS             complement(69056..70489)
                     /locus_tag="MOX77_000267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
                     /protein_id="HCA3355947.1"
                     /translation="MLEQLSQLFEFLWGGPLFLCVIGIGFYFTVRLKFFQIINLKEIY
                     RNTIGTLAGKNKQNTTGEAASKKSLKSIEVAATVLSGSLGAGTIAGVAAAIAVGGPGA
                     IFWMWIIAVVGMMTKMVEVTLAVKYRSKGENGEYYGGPMHYIKKELNKKWYPLAGLYA
                     FALMILVITDACFVQTNTMAAVIHYTFDIPTSVIGGFIVIVGALVILKGLASLGKFCT
                     IALPPITIAYFIGAAGVVVLNIEAIPQVIKSIFYYAFAPAPAAGGFVGSTIMMAISKG
                     ASRGIFTNEAGMGTSATVHATANVDYAFRQGMWGAVEVFFVSMITCNFTAFAVLASGM
                     WTDASYQGIQIIFAALKETWHPIIVQVLCLGVALILFTSYLGSYIKFRTSINYIFGDK
                     LERIIKWLYFLPPLIAVNMEIPVIWLMADIAVGFLVIPNVIALFLLRKEFISEFNLFR
                     TRTQRDTNSEKTTQITHVNMSKSEGEE"
     gene            complement(70735..71950)
                     /gene="dpaL"
                     /locus_tag="MOX77_000268"
                     /pseudo
     CDS             complement(70735..71950)
                     /gene="dpaL"
                     /locus_tag="MOX77_000268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459977.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopropionate ammonia-lyase"
     gene            72268..72729
                     /locus_tag="MOX77_000269"
     CDS             72268..72729
                     /locus_tag="MOX77_000269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HCA3355948.1"
                     /translation="MKLDAWDKNILTLLQRDNRLSQREIAEQVNLSPSAVNRRIAALE
                     EAGIIKGNVSLVDAGKVGRPVTIVVQVVIENERFNLLEEARQRFVSCPQVQQVYYVTG
                     DFDFLLVLNVRDMAEYETLTRELFFSSGNIKSFKTIVVMQNAKQEMRVLIE"
     gene            72930..74330
                     /gene="asnS"
                     /locus_tag="MOX77_000270"
     CDS             72930..74330
                     /gene="asnS"
                     /locus_tag="MOX77_000270"
                     /EC_number="6.1.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine--tRNA ligase"
                     /protein_id="HCA3355949.1"
                     /translation="MSVVPVADVLQGRVAVDQEVTVRGWVRTRRDSKAGISFLAVYDG
                     SCFDPVQAVINNSLPNYNEEVLHLTTGCSVVVTGKVVASPGQGQSFEIQATKVEVAGW
                     VEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWV
                     STPLITASDTEGAGEMFRVSTLDLENLPRNDQGRVDFDKDFFGKESFLTVSGQLNGET
                     YACALSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAFADLEDNARLAEAMLKYVFKA
                     VLEERADDMKFFAERVDKDAIARLERFVSTDFAQVDYTDAVAILERCGKTFENPVFWG
                     VDLSSEHERYLAEEHFKAPVVVKNYPKEIKAFYMRLNEDGKTVAAMDVLAPGIGEIIG
                     GSQREERLDVLDARMAEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQN
                     VRDVIPFPRTPRNASF"
     gene            74949..76040
                     /gene="ompF"
                     /locus_tag="MOX77_000271"
     CDS             74949..76040
                     /gene="ompF"
                     /locus_tag="MOX77_000271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin OmpF"
                     /protein_id="HCA3355950.1"
                     /translation="MMKRKILAAVIPALLAAATANAAEIYNKDGNKLDLYGKAVGRHV
                     WTTTGDSKNADQTYAQIGFKGETQINTDLTGFGQWEYRTKADRAEGEQQNSNLVRLAF
                     AGLKYAEVGSIDYGRNYGIVYDVESYTDMAPYFSGETWGGAYTDNYMTSRAGGLLTYR
                     NSDFFGLVDGLSFGIQYQGKNQDNHSINSQNGDGVGYTMAYEFDGFGVTAAYSNSKRT
                     NDQQDRDGNGDRAESWAVGAKYDANNVYLAAVYAETRNMSIVENTVTDTVEMANKTQN
                     LEVVAQYQFDFGLRPAISYVQSKGKQLNGADGSADLAKYIQAGATYYFNKNMNVWVDY
                     RFNLLDENDYSSSYVGTDDQAAVGITYQF"
     gene            76225..77415
                     /gene="aspC"
                     /locus_tag="MOX77_000272"
     CDS             76225..77415
                     /gene="aspC"
                     /locus_tag="MOX77_000272"
                     /EC_number="2.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009653304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate transaminase"
                     /protein_id="HCA3355951.1"
                     /translation="MFENITAAPADPILGLADLFRADDRPGKINLGIGVYKDETGKTP
                     VLTSVKKAEQYLLENETTKNYLGIDGIPEFARCTQELLFGKGSALINDKRARTAQTPG
                     GTGALRIAADFLAKNTPVKRVWVSNPSWPNHKSVFNAAGLEVREYAYYDAENHSLDFE
                     ALQASLSEAQAGDVVLFHGCCHNPTGIDPTLEQWQVLAELSVEKGWLPLFDFAYQGFA
                     RGLEEDAEGLRAFAALHKELIVASSYSKNFGLYNERVGACTLVAADAETVDRAFSQMK
                     SAIRANYSNPPAHGASIVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGA
                     NRDFSFIIKQNGMFSFSGLTKDQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAI
                     VAVL"
     gene            complement(77477..78124)
                     /locus_tag="MOX77_000273"
     CDS             complement(77477..78124)
                     /locus_tag="MOX77_000273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003035823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HCA3355952.1"
                     /translation="MNYRIIPVTAFSQNCSLIWCEQTRLAALVDPGGDAEKIKQEVDA
                     SGVTLMQILLTHGHLDHVGAASELAQHYGVPVIGPEKEDEFWLQGLPAQSRMFGLDEC
                     QPLTPDRWLNDGDRVSVGNVTLQVLHCPGHTPGHVVFFDEQSQLLISGDVIFKGGVGR
                     SDFPRGDHTQLIDAIKRKLLPLGDDVTFIPGHGPLSTLGYERLHNSFLQDEMPVW"
     gene            complement(78152..78700)
                     /locus_tag="MOX77_000274"
     CDS             complement(78152..78700)
                     /locus_tag="MOX77_000274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcbK family protein"
                     /protein_id="HCA3355953.1"
                     /translation="MDKFDANRRKLLALGGVALGAAILPSPAFATLSTPRPRILTLNN
                     LHTGESIKAEFFDGRAYIQDELAKLNHFFRDYRANKVRSIDPRLFDQLYRLQGLLGTR
                     KPVQLISGYRSLDTNNELRARSSGVAKKSYHTKGQAMDFHIEGVALSNIRKAALSMRA
                     GGVGYYPRSNFVHIDTGPARHW"
     gene            complement(78960..80807)
                     /gene="ldtD"
                     /locus_tag="MOX77_000275"
     CDS             complement(78960..80807)
                     /gene="ldtD"
                     /locus_tag="MOX77_000275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HCA3355954.1"
                     /translation="MLLNKMCGRCLSAISLCLAVTFAPLFNAQADEPEMIPGDSAVAA
                     TGQAGPQKQSAATAILAGIQPLPEGVSAEKVRADLQSQLPSGYTPVYMSQLTLLYAAR
                     DMKPMWDNRDAVKAFQQQLAEVAIAGFQPQFTAWVALLTAPAVNGMARDVVLSDAMMG
                     YLHFIANIPVKGQRWLYSNKPYALATPPVSVINQWQIALEEGQLPMFVASLAPQHPQY
                     APMHDALLKLVADSRPWPQLTNTATLRPGQWSNDVPALREILQRTGMLDGGPKIALPG
                     DNTSDSAVVSPSAVVDETSVAQPVDEPTARRSKPAPAARAYDRELVEAVKRFQAWQGL
                     GADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAELSTGIMVNIPAYSLVYYQNG
                     NQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVWNDPGYLERH
                     GYTVMRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNSLGRYKFNMPSSDAIYL
                     HDTPNHNLFQRDARALSSGCVRVNKASELANMLLQDAGWNDARISGALKQGDTRYVNI
                     RQNIPVNLYYLTAFVGADGRMQYRTDIYNYDLTARSSAQIVPKVEQLIR"
     gene            complement(81152..>82450)
                     /gene="mukB"
                     /locus_tag="MOX77_000276"
     CDS             complement(81152..>82450)
                     /gene="mukB"
                     /locus_tag="MOX77_000276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partition protein MukB"
                     /protein_id="HCA3355955.1"
                     /translation="ARQRRDELHAQLSNNRSRRNQLEKALTFCEAEMENLTRKLRKLE
                     RDYHEMREQVVTAKAGWCAVMRMVKDNGVERRLHRRELAYLSADELRSMSDKALGALR
                     LAVADNEHLRDVLRLSEDPKRPERKIQFFVAVYQHLRERIRQDIIRTDDPVEAIEQME
                     IELSRLTEELTSREQKLAISSRSVANIIRKTIQREQNRIRMLNQGLQSVSFGQVNSVR
                     LNVNVRETHATLLDVLSEQQEQHQDLFNSNRLTFSEALAKLYQRLNPQIDMGQRTPQT
                     IGEELLDYRNYLEMEVEVNRGSDGWLRAESGALSTGEAIGTGMSILVMVVQSWEDEAR
                     RLRGKDISPCRLLFLDEAARLDARSIATLFELCERLQMQLIIAAPENISPEKGTTYKL
                     VRKVFQNTEHVHVVGLRGFAPQLPETLPGTQAEDTPSEAS"
BASE COUNT        19935 a        21914 c        19935 g        20666 t
ORIGIN      
        1 taagcggaga agattctatc tgcgtaaaaa agtcggcatg cgcttccagc atggcatcag
       61 catacgcctg attatgctgc tgccgacttc cctcgctatc ctgtaaccat gccagacact
      121 tacgccatat ctcgcgacag tgagcaaact cctccagacg tgagaccggc agcggtaagg
      181 cggcaaacgt ctggcgaatt tcgtgttcca gcccacgaac gtgttcacgg gtaagccatt
      241 ggtttccgcc cgttcgctca ctaatacgcg cccattgctc ctgtaatgcc tgcgcggcga
      301 catcactcat ctcctggctc cagcgacgcc agtgcgcgtc cagatagcga tggaattgct
      361 gggtttccga ccactcggta ccgtgcaaac gcacgacttt atcctccggg aggacaaact
      421 ccagctcgcc ccataccagc ccacgcttac agtgaatcgc caataactga ttgaatggaa
      481 taagatattc atgcctgtcg ccagacactt tcaccccagc attgaggatc acggcacgat
      541 catacgggtg ttgcgccaga cgttttccaa gagaagttgc tttcagttcc atgactcagc
      601 gaatccagac gtaaagatgt gcttatcagt gtaaccgcca gagaaaacgt gctccagtct
      661 aaaaaaacgt tacaattgcc cgcagtaata gaaaaccgga atgaactgag ggtttatgcg
      721 taccgttctg aatattttaa actttgtact gggcggcttt gccactacgc tggcctggct
      781 gctggcgacg ctggtcagta ttgtgcttat ttttaccctg ccgttgaccc gctcctgctg
      841 ggagataacc aaactgtccc tgttccctta cggtaatgaa gccattcacg ttgacgaact
      901 taatccggcg gcaaaaagcg tattaatgaa tactggcggt accttgctga atattttctg
      961 gttacttttt ttcggctggt ggctatgcct gatgcacatt gcctccggta tcgcgcagtg
     1021 tgtcactatc atcgggatac ctgtcggtat tgcgaacttt aaaattgccg cgattgcgct
     1081 ttggcctgtc ggtcgccgcg tcgtctctgt agaaaccgct cgcgccgcgc gagaagctaa
     1141 cgcgcgccgc cgttttgaat gatcgggaca aatagccttt atgttaagtc cgttgattcg
     1201 ccgttatacc tggaacagta cctggctgta ttacatccgc atttttatcg ctctgtgcgg
     1261 caccaccgcc ctgccctggt ggctgggcga cgtcaaactg accatcccgc tcacgctcgg
     1321 tatggttgcc gcggcgctaa ccgatctcga cgaccgcctt gccggacgct tgcgtaattt
     1381 aatcattacc ttaatttgct tttttatcgc gtcggcttct gtggagctgc tctttccctg
     1441 gccgtggcta tttgcgttgg gcttaacgtt atccaccagc ggatttattc tgttgggagg
     1501 actagggcaa cgctatgcca ccatcgcgtt cggcgcgtta ctcattgcga tttatacgat
     1561 gctgggcgct tctttatacg atcactggta tcagcaacca ctgctcctgc tggcaggcgc
     1621 agtatggtat aacctactga cgctaaccgg gcatctgcta tttccgatcc gtccgttgca
     1681 ggataatctg gcacgcagtt acgaacagtt ggcgcactat ctggaactga aatcacgtct
     1741 gtttgatcct gatattgaag atgaaagcca ggcgccgctc tatgatttag cgttagcgaa
     1801 cgggcagtta atggcgacgc tgaaccaaac gaaagtgtcg ttgttgactc gcctgcgcgg
     1861 cgatcgcggt caacgcggta cgcgccgcac tctccattac tattttgtgg cgcaggatat
     1921 tcatgaacgc gccagttctt cgcatattca ataccagacg ctgcgcgatt attttcgcca
     1981 tagcgacgtc atgttccgct ttcaacgtct gatgtcgatg caggcgcagg cctgtacgca
     2041 gctggcgcgc tgtatcttac tgcgtacgcc gtaccagcat gatccgcgct ttgaacgcgt
     2101 ctttacccac attgacgccg cgcttgaacg tatgcgcgcc agcggcgctt ctttagagct
     2161 gctgaatacg cttggattct tattaaccaa cctacgcgct attgatgcgc aactggcgac
     2221 gatcgagtcg gagcaggccc aggcaatgcc gcgcaatgag tcagaaaacc agttggctga
     2281 cgatagcctg cacgggttta gcgacatctg gctgcgtctg agccgtaatt ttaccccgga
     2341 gtccgctctc tttcgccatg cggtacgcat gtcgctggta ttgtgcatcg gttatgctct
     2401 catccaaatt accgggatgc gccacgggta ctggatattg ctcaccagcc tgttcgtttg
     2461 tcagcctaac tataacgcga cccgccatcg ccttgcgctc aggattatcg gtacgttggt
     2521 aggcgttgcg atcggcctgc cgattttatg gtttgtccct tcgcttgaag gacagttagt
     2581 tctgctggtg attaccggcg tgcttttctt cgcattccgt aatgtgcagt atgcccatgc
     2641 gacgatgttc atcaccctgc tggtattact ctgctttaac ctcctgggcg aaggcttcga
     2701 ggtagcgtta ccgcgcgtca tcgacacgtt aattggctgc gctatcgcct gggctgcggt
     2761 cagctttatt tggccggact ggcgctttcg caaccttccc cgggtactcc agcgcgccac
     2821 cgatgctaat tgccgctacc ttgatgcgat ccttgagcaa tatcatcagg gacgggataa
     2881 ccgcctggcc tatcgcattg ccagacgcga cgcgcacaac cgcgatgcag aactggcatc
     2941 cgtggtttct aatatgtcga gcgaacccga cgtcacggct gaaacccggg aggcggcgtt
     3001 caggctgctt tgcctcaatc acacttttac cagctatatc tccgccctcg gcgcgcaccg
     3061 cgaaaagctc agcaatccgg acgtgttggg gcttctggat gacgcggtct gctacgttga
     3121 tgatgcgctt catcatcagc cagaagacga acagcgcgta caccaggcgc tggagggttt
     3181 aaagcagcga gttcagtcgc tggaaacacg tccggacagc aaagaacctc tggttgttca
     3241 acaaattggt ttgctcattg ccttactgcc cgagattgga cgcttgcaac ggcaaatttc
     3301 accgccgact tctacattaa ttacccagcc gtaagcgaat gagcccagtc ggcaagctcc
     3361 tggcgacgac tcgccgggag cgccgcttca tgtacgccga caattgcgcc ttccagggca
     3421 tacaaaactt tcaccgtcag caagggattg ctttgtcgca accttaacca gcacattttc
     3481 gcgcccagta tgcgtaacat attttcgtcc tttatccctg actcattgag caatgtttcc
     3541 agatggaagg tcatattggg gagatctttg agtctgtgct gtaaaatacg gctgtgtttt
     3601 tccttcattg ccgcgtcaag agaatacttc gataaacgta ccagctgctg ctgatcgcgc
     3661 cacaggcttt catccacccg gtaatagttg agcataacgg gacgtccaca tttcataaac
     3721 atgagccagg cggggggatg cttcacacag tagggtacgc tttcttcaca ggcgcggaga
     3781 taaagctcgc cattagccac catcgcaaag acggtatcct ccacagtcag actatagcta
     3841 ccgaataaag atcgatactg gatcgtcccc aaagaggcca aatattcttg cgattcatag
     3901 atcctgtcat aagagagtgc tctcataaaa ttccttttaa atcataaagt aaaagaatga
     3961 tttgcagtaa cggatccgtt aatgacgaaa ataggcaact tatactccgc gagcaagatg
     4021 atttttattt ttgacgccac taagaataaa aattgcgaga cagtttccga aaatagagtt
     4081 gatctttcat cgccacagga gtactgtatg aatatacagt aactcacagg gctggattga
     4141 ttatgtacac ttcaggttat gcaaatcgtt cttcgtcatt tcctaccact acccacaacg
     4201 ctgcgcgcac cgctacggaa aatgccgcgg caggactggt cagtgaagtt gtctaccacg
     4261 aagaccagcc catgatggcg caactcctgc ttttgccttt actccgtcag ttaggccaac
     4321 aatcacgctg gcagctctgg ctcacgccgc agcaaaagct cagccgtgaa tgggtacagt
     4381 cttcaggttt gccattaacg aaagtgatgc aaattagcca gcttgcgcct cgtcatacgc
     4441 tggagtcgat gatccgcgct ttgcgtacag gaaattacag cgtggtaatt ggttggatga
     4501 ctgaagaact gacagaagaa gaacatgcca gcctggttga agcagcgaag gtaggtaatg
     4561 cggtagggtt tatcatgcgc cctgtacgtg cgcacgcttt acccaggaga cagcattccg
     4621 ggctaaaaat tcactctaat ttgtatcatt aagtaaaatt aggatttatc ctggactttt
     4681 ttttacgcga acgtatctcc tttgagtgct aacgtttttt tgcgagaacg cttgccagaa
     4741 gcggtttccg caatctttgc tgtacgattt atcatccgaa actgttaaat gatgtgtata
     4801 cccgtcatgt tttttcacat gtctgacgga gttcacactt gtaagtttcc aactacgttg
     4861 tagactttac atcgccaggg gtgctcagca taagccgtag atatcggtag agtaactatt
     4921 gagcagatcc cccggtgaag gatttaaccg tgttatctcg ttggagatat tcatggcgta
     4981 ttttggatga taacgaggcg caaaaaatga aaaagacagc tatcgcgatt gcagtggcac
     5041 tggctggttt cgctaccgta gcgcaggccg ctccgaaaga taacacctgg tacgctggtg
     5101 ctaaactggg ctggtctcag taccatgaca ccggcttcat tcacaatgat ggcccgactc
     5161 atgaaaacca actgggcgca ggtgcttttg gtggttacca ggttaacccg tacgttggct
     5221 ttgaaatggg ctacgactgg ttaggccgta tgccgtacaa aggcgacaac accaatggcg
     5281 cttataaagc tcagggcgtt cagttgaccg ctaaactggg ttatccaatc actgacgatc
     5341 tggacgttta tacccgtctg ggtggtatgg tatggcgtgc agacaccaag tctaacgtcc
     5401 ctggcggcgc gtctactaaa gaccacgaca ccggcgtttc cccggtattc gcgggcggta
     5461 tcgagtatgc catcacccct gaaatcgcaa cccgtctgga ataccagtgg actaacaaca
     5521 tcggtgatgc caacaccatc ggcacccgtc cggacaacgg cctgctgagc gtaggtgttt
     5581 cctaccgttt cggccagcaa gaagctgctc cggtagtagc tccggcaccg gctccggctc
     5641 cggaagtaca gaccaagcac ttcactctga agtctgacgt actgttcaac ttcaacaaat
     5701 cgaccctgaa gccggaaggc cagcaggctc tggatcagct gtacagccag ctgagcaacc
     5761 tggatccgaa agacggttcc gttgtcgttc tgggcttcac tgaccgtatc ggttctgacg
     5821 cttacaacca gggtctgtcc gaaaaacgtg ctcagtctgt tgttgattac ctgatctcca
     5881 aaggtattcc gtctgacaaa atctccgcac gtggtatggg cgaatctaac ccggttaccg
     5941 gcaacacctg tgacaacgtg aaacctcgcg ctgccctgat cgattgcctg gctccggatc
     6001 gtcgtgtaga gatcgaagtt aaaggcgtta aagacgtggt aactcagccg caggcttaag
     6061 tttccgtctg ataaaaaacc ccgcttcgcg gggttttttg ctctggtctg ggtggcaacg
     6121 cctttcagcg ttacttcttg cctaataacg cctgtaaatc ctgctttaac gtggtcattt
     6181 gcgtggcata tttctcttta tgctccgcgt cttctatcag ttgcacaatc gtttcggata
     6241 atgttttacc gcgtcgctgc gcaaggcccg ccagacgctg ccagaccata aactctaaat
     6301 cgatagattt tttgcgcgta tgctgatgct ccgcattgaa gtgtcgtttg cgtcttgccc
     6361 gaatggtttg tctcatccga ttaagcaagg caggattcat atgcctgtct atccagacat
     6421 ttacccgcac cggttcattt tcgagggcca acaacaaatt gacggcttcc tgggcagcac
     6481 tggcttccac gtagcgggtg atcaactccc cttcgcggtg ctttttcacc agatatttcc
     6541 atttccaacc gctttcaaga ttttcaagtt gttgatattt cattgtgatc ccaatgttac
     6601 cgtgtaactg ttatcagaat atcagttttt tagccatctg aagaaaagaa tctcgaacct
     6661 gtgaatggtt acacgtcttc atattacttt gcattcgctt tccgcgtgtg cagcgtgacg
     6721 ggttaggcta taatcccccc ttttacaaca gactaaaaaa cctcaacttt gaccattacg
     6781 aaacttgcat ggcgtgatct ggttccggat agcgaaagct atcaggagat atttgcacag
     6841 ccacacgcga ctgacgaaaa cgacacctta ctcagtgata ctcagccacg actgcaattt
     6901 gcgcttgagc aacttataca gccgtgggca tcatcctctt ttatgctgac taaagcgcct
     6961 gaagagcaag agtatctcac tttactttca gatgccgtcc gcgctctgca aaccgatgcc
     7021 ggacaattaa ccggcggaca ttatgacgtt tccgggcata ctgttcatta ccgcgccgcg
     7081 cagaatgcgc aagacaactt tgccaccgtc acacaagtcg tcagcgctga ctgggtcgaa
     7141 gccgaacagc tctttggttg cctgcggcag tataacggcg acattaccct gcaaccggga
     7201 ctggttcatc aggcgaacgg cggcgtgctg attatttcct tacgaaccct tctggcgcag
     7261 ccgttactat ggatgcgtct gaaagccatc gttagccgcg agcgttttga ctgggtggcc
     7321 tttgacgagt cgcgtccatt accggtctcc gtgccatcaa tgccgctcaa actgaaggtg
     7381 attctggttg gcgaacgtga atcactggct gattttcagg agatggaacc ggagctcgcg
     7441 gaacaggcta tctacagtga atttgaagac aatttacaga tagcggacgc agaagctatg
     7501 accctgtggt gtcaatgggt gacgcgtatc gctttacgcg ataatttgcc ccctccggca
     7561 ccggacgcct ggcccgtcct gatacgcgag gctgtgcgct ataccggcga acaggatacg
     7621 ctgcctcttt gcccactgtg gatagcccgc cagtttaagg aggcgtcgcc tttatgcgaa
     7681 ggcgatacct gcggcgcaga agcgctcagt ctgatgcttg cccgacgcga atggcgagaa
     7741 ggctttctgg cggagcggat gcaaggcgag attctgcaag agcagatcct gattgaaacc
     7801 gaaggcgaac gcgttggaca aatcaatgcg ctttccgtca ttgagtttcc cggacatccg
     7861 cgcgcctttg gcgaaccgtc gcgaattagc tgtgttgtgc atatcggcga tggcgaattt
     7921 aacgatattg agcgcaaggc cgaacttggc ggaaatatcc acgctaaggg aatgatgatt
     7981 atgcaggcct tcctgatgtc ggagttgcag ctggagcaac aaattccctt ctctgcctcg
     8041 ttaacctttg agcagtccta cagcgaagtg gatggcgata gcgcctcaat ggcggaatta
     8101 tgtgcgctca tcagcgcgct ggccaatgtg ccagtgaatc aaaatattgc gattaccggc
     8161 tcggtcgatc agtttggtcg cgcgcaacca gtgggcgggc taaacgaaaa aattgaaggt
     8221 ttcttcgcca tctgcgagca gcgggaatta aacggtaaac agggcgtgat tatccctgcc
     8281 gccaatgtcc gccatctcag tcttaaatct gaactgctgc aagcggttaa agaagagaag
     8341 ttcactatct gggcggtaga cgacgtgacc gacgccttac cgctactgtt aaatctggtg
     8401 tgggatggcg aaggtcaaac gacgttgatg cagactatcc aggagcgtat cgcgcaggcg
     8461 acgcaacagg aaggccgtca tcgtttcccg tggccattac gttggctgaa cgcttttatt
     8521 ccgaactgat cggacttgtt cagcgtacac gtgttagcta tcctgcgtgc ttcaataaaa
     8581 taaggtttac ataaaacatg gtagataaac gcgaatccta tacaaaagaa gaccttcttg
     8641 cctctggtcg tggtgaactg tttggcgcta aagggccgca actccctgcg ccgaacatgc
     8701 tgatgatgga ccgcgtcgtt aagatgaccg aaacgggcgg caatttcgac aaaggctatg
     8761 tcgaagccga gctggatatc aatccggatc tatggttctt cggatgccac tttatcggcg
     8821 atccggtgat gcccggttgt ctgggtctgg atgctatgtg gcaattggtg ggattctacc
     8881 tgggctggtt gggcggcgaa ggcaaaggcc gcgctctggg cgtgggcgaa gtgaaattta
     8941 ccggtcaggt tctgccgaca gccaggaaag tcacctatcg cattcatttt aaacgtatcg
     9001 taaaccgtcg cctgatcatg ggcctggcgg acggtgaggt tctggtggat ggtcgtctga
     9061 tctataccgc acacgatttg aaagtcggtt tgttccagga tacttccgcg ttctaagtgt
     9121 tgaattgata ttccgcgcta tcggtatcat gcttgcaaag cccataaagg cgaaacctcc
     9181 gcactgcgga ggtttctttt tctaaagaga cagaatcagg ccattaccgc cctgtcctcc
     9241 atggcttgtc gccaacctcc caaccagtat gaccgttgat tcagcgtctg atagggacac
     9301 atttcttttg atcgtccggc gatgccggcc tgatatccac gttgatgtgc ccgttccagg
     9361 cgatctcgtt tttgtctcct catgcctcgt ttccctcata tttgtatctg gtggaaaaga
     9421 aaacagtgat tacaaaatgt gcaatcacac tacacgaata cctctaaatg gatcgcccgt
     9481 caatgcgcaa aattcacacc aatgtcatat ttgtgagcta tacggtaaat catttgtaca
     9541 aaaaatgtga gccataacaa ctatttttcc ggcgtcaaaa ataaaaaccg cctcaggcgc
     9601 acgacctgaa gcggttaaat ttacattatt tttatctcag ggaaggcgct ttatctcatc
     9661 tgcgatagcg gccgcttcct gactccatgc gcttgccagt actttgacca tctcatcata
     9721 gccatctttc tgctggctgg cttcgatatg gaaaggccgc ttaatcagtt gtccgttgtg
     9781 gtttaataac cactccccgc tgacgataac cttaccatcg taacgtccat ggaatccggt
     9841 tacggtaacg ttcaacgtat cctgggtggt tcccaacggc tgggaagcga cgacccagcc
     9901 aggaagccgg gcgctaagat tcgccaccag cgtgttacgt aattgctgat ccagcgggct
     9961 ggcccacaga ttgttattgg caatcacata ctggacatca ctggtttgat acaccacacc
    10021 gttacctgcc agatagtcag gtacggaaac ctgctctacc cataagagac ggttgccctg
    10081 acttgcggtg ctttgcacac cgctttgcgc tatcgggagc tgataatagc ttttattttc
    10141 tccgccggaa ctacatgacg ccagccagaa cgccattatc acgactagcc attttttcat
    10201 tgtttcgccc tcttaggctc aggatctttt ttatccttcg cttcaaatac cagcgcgttg
    10261 ctcttctcgt tcagagtttt caacaccggt tgtaactcac gaagcacctg atcgagacgc
    10321 tgcatatccg ccaccatttt gttatacgcc gccgatccag gctggaagcc ctgcatactg
    10381 cggttaagtt cgcgtaacgt cgtttgcata tccgccggaa gctgctgcat cgactgactg
    10441 gaggtaatct tgttcatatt atccagcgtg gtttgcaacc gacgcatagt acgctggctt
    10501 tcagacagcg tattggtcgc ttgttcaatc atcggattca gcggcaggtt gttgatctta
    10561 tccaacgttt ccaccagtcg ctgttgaatt tgcgccaggc cgctgctgac ggtgggaata
    10621 atttcataac catcaaattc gcgtagtccg gtaatcggcg gctccttagg ataaaagtcc
    10681 agatcgacat acagcgcccc ggtcaccagg ttaccggttt taagcgaagc gcgtaaaccg
    10741 cgcttaagca gttccgtcaa atgcgcgcca acatccgcat tttctcccag ttgcgctttc
    10801 agacgctccg gttcaatgcg caccagcaca ggaatacggt aatcgtcgtt aaacacctga
    10861 cgcatattag acgcaaagaa aggcactttg cttaccgtcc ccagacgaat accgcggaac
    10921 tccagcggcg cgccgggttg taatccgcgc accgaatctt taaagaacat caggtaatcg
    10981 atatgatcgg tgtacagcga atcctgaata cttttttgat cgtcgtagag attaaacgcc
    11041 gttttttcgg cgacgggttg cccctgctca agtccttccg gcacatcaaa actcacgccg
    11101 ccgccaaata acgtcgtcaa cgatcccatt tccacgcgca ttcccgccga tgtcagatcc
    11161 acagcgatac cgctatcttt ccagaatcgg acattactgg tgaccaatcg atcgtttggc
    11221 gccttaatga acaactgata actcattgtc cgtttttgcg gatcgaaaga gctggtttca
    11281 acggacccta cccgatagcc ccggaacaga acgggatcgc caggactgag ctgaccggcc
    11341 tttttgctgt ccagaatcac acgaatacct ttggcatcgg gcggcgccaa cggcggtgag
    11401 tcaagaagct gatagctttc cggctgactg cccttacttc ctggttgtag ttcaatatac
    11461 gcgcctgata acaacgtccc aagcccgctt atgccttcac gccccacctg cggttttacg
    11521 acccaaaata ccgagtcttt atgcagcaac ttttccatac cggaatgaag ccgcgctttg
    11581 atttgtacgt gggtcagatc gtcagtcagc gtcgcgcttt caaccacgcc gacatccacg
    11641 ctgcgacttt tgatcgtcgt ttttccgcct tcaatgcctt ccgcattggt ggtaattaag
    11701 gtaacttccg gtccctggtg gctgtagtga taaaacagaa tccaggctcc gataagcgca
    11761 gtaacaatcg ggaatatcca gacaggcgac caatttttca ccttttgtac tttggcttcc
    11821 ccttttttag gttccatgct atcaggactc ctcatggcct ggttcgtatt cacgatccca
    11881 cgacagacgc ggatcaaagg tcatcgcaga aaacattgtc attatgacga ctaaagcaaa
    11941 catcaacgca cccatcgcag gataaatatt cattaaccct cccatacgca ccagcgcaga
    12001 gagtacggca atgacaaaga catcaatcat tgaccagcgc cccacaaact ccactacttc
    12061 ataaataaaa tgcatccgtt cactgtcgcg cttaccgtgg cctttcgcat cccaacaaag
    12121 ccaggcaatg gcgatcattt ttagcgtcgg caccataata ctggcaagaa agataaccgc
    12181 cgccactgga taagacccct cgctccacag caaaatcacg ccagccagaa tggtcgacgg
    12241 cattttcgag cccagtaagt cagtaatcat aatcggcaat atattggcgg gcagataaag
    12301 catgatcgag gtaaataata acgccagcgt ccactgcaaa ctgtttttac gccggacata
    12361 gcctttcgta tggcaacgcg gacagacgag actctccgca ggcaggatcg ccgtacagca
    12421 ggcgcaagaa cgcaaagact gccggatacc ggtaatcccc ggcgttaacg gctgcgccag
    12481 tgcaggttgc ggggcgatat catcccacaa ccagcggcga tcgacacact ggaacgcccg
    12541 cagttgaacg agacaaaata agcaccaggg aataaagctg ctgccgatgc cgatatcgcc
    12601 gtaagccatc agcttaacaa aactgaccaa caccccggcg agaaatattt ccgccattcc
    12661 ccacgatttg aggaggaaaa agatccttgc cagcgttttt tttaccgaca acggcagact
    12721 ggcgcggttg acaagtaata gaatggtcac caggcaaaat gccggcacca gttggacaaa
    12781 taataaaaag aacgtgccga ggctggcgta atcttcagaa aacatgacgc cggggatttc
    12841 cagaagcgtg acttcgctgg tgacgcccgc gacattcata ttcacgaagg gaaaaaggtt
    12901 agaaagcagc aacataaata gtgccgctaa cgcataggcg gtaggacgct gccggggcgc
    12961 gtcccactcg gtcgttaacg ttgcgccgca tcgtggacat gctgcttttt gcccatgcga
    13021 gaggcggggt aaagccacca gcatgtcgca ttgcgggcac aatatgtgct tcgcagcatg
    13081 gtgatgttca cacataggcg ctcctttcgt tatgccccgt ttttcaggcc ttcaagatac
    13141 tcccaacgtt cgaaggcttg ctcaagttct tgctccgcct gacttaaatc ggccagaact
    13201 ttctgcgttt gctcatgggg ttggctaaaa aaggccgcat ccgcaacctg cgcctgtagc
    13261 gcttccagct tcgcttccag gtcttcaagc tgaccgggta actgctccag ctcgcgctgc
    13321 agtttatagc ttagtttgct actgccacgt tttacaattt ctgctttagg ggcaataact
    13381 tcctcatttt ttttcgtcat cggctgtttc gtcgccagat gctgctcttg ctgcgcacgc
    13441 gcatcatggt agccgccgat ataacgtccg attttgccgc cgccctcgaa aatccagcat
    13501 tccgtcacgg tattatcgac aaattgccga tcatggctga ccagtagtac cgtgccctga
    13561 tagccatcaa ttaattcttc taatagttcc agcgtttcga cgtcaagatc gttcgttggt
    13621 tcatcgagaa ttaaaagatt gctcggcttg aggaacagtc gcgccagcag cagacggtta
    13681 cgttcgccgc cggaaagcgc gcggacgggc gtcatcgccc gtttggggtg aaacaggaag
    13741 tcctgcaaat agcccagtac atggcgcggc ttaccgttta ccatcacctc ttgcttgcct
    13801 tccgcaaggt tatccatcac ggttttttcc gggtccagtt cggcgcgatg ctgatcgaag
    13861 taggcgactt ccagcttcgt tcctacgtgg atgcgcccgc tgtcagcctg aagctgtccc
    13921 agcatcagtt tcagtagcgt ggttttaccg cagccgttcg ggccaattaa cgcaatcttg
    13981 tcgccgcgct gtacctgagc ggagaaatct tttaccagct gttttccttc tacctggtaa
    14041 tcgacgtttt ccatctcaaa aacgatttta ccggagcgcg tcgcctcttc gacctgcatc
    14101 ttcgccgtgc ccatcacttc ccggcgctcg ctgcgttcac gacgcatcgc ttttaacgcc
    14161 cgcacgcgcc cttcattacg ggtgcggcgc gccttgatcc cctggcgaat ccagacttct
    14221 tcctgtgcca gtttgcgatc aaattccgcg ttttgtaact cttctacgcg cagcgcttct
    14281 tctttctcca gcaggtattg atcgtaattt cccggatagg tgaccagttt gccacgatcg
    14341 agatcgacaa tgcgggtcgc catattgcga ataaacgaac gatcgtgaga gataaaaata
    14401 atcgttccgt taaaggtttt cagaaaccct tccagccagt cgatagtttc gatatccaga
    14461 tggttagtcg gttcatccag taacaatacg cgcggattgc tgaccagcgc ccgacccagc
    14521 gcggctttac gcagccagcc gccggagagc gacgacagcg cggcgttagg atcgagtcca
    14581 agctgcgcca gcacttcatt aatacggttt tccagctgcc acagattatg atgatcgagc
    14641 tgttcctgta cgcgcgccat ttcattgagg tttttctcgc tgggatcggt catcaccaga
    14701 cgggaaatct catgatagcg cttgagatat tccgcttgtt cttcgatacc ttcggcgaca
    14761 aagtcataga cgctacccgc aatattacgg ggcgggtcct gttgcagacg cgcgacgatc
    14821 agatcctgtt cataaataat acgcccatcg tccagaccct gttcgcggtt gaggatcttc
    14881 atcaaggtgg atttcccggc gccgttacgc cccaccagac agacgcgttc gttatcttcg
    14941 atatgcaact ctgcgttatc gagaagcggc gcgtcgctga acgacagcca tgcgccatgc
    15001 atactgatta atgacattta cttttccttt caggcggcgc ggatcagcca gcaattatga
    15061 atctgacggt tacgggcaaa atccggggaa agcgtttttt gcgtaatttc ttgtgcggta
    15121 agccccagct cagccagccc ttccagatcc atacggaatc cgcgcttatt atttgagaac
    15181 atgatggtgc cgcctttacg cagcaggcgt tttaaatctt tcattaacgc gacatgatcg
    15241 cgctgaacat caaacgactc ttccatacgt tttgagttag agaacgtcgg cggatcgata
    15301 aagatcaaat cgaactgttc attcgcctcg cgcagccagc ccaggcagtc ggcctgaatc
    15361 aggcgatgcg cgcggccgct cagtccgttc agacgcaaat tacgttcggc ccactccaga
    15421 taggtgcggg acatatccac cgttgtggtg ttgcgcgcgc cgcccagacc cgcatgtacg
    15481 ctggcgctgc cggtataaga aaagagattc aggaaatctt tgcctttgct catttctccc
    15541 agcattctgc gggcaatacg gtgatcgagg aacagaccag tgtcgagata atccgtcaga
    15601 tttacccata agcgcgcatt atattcgctg acctcaagga actcgccctt ctcgctcatt
    15661 ttctgatact ggttttttcc tttttgccgt tcgcgggttt ttaacaccag tttattcggc
    15721 ggaataccga gcactgacaa ggttgccgca ataatatcga acagacgttg ccgcgctttt
    15781 tgcgcatcca ccgttttcgg cggcgcatat tcctgaatca ccgcccagtc gccgtaacgg
    15841 tctaccgcca cgttatattc cggcaggtcg gcatcataca agcgatagca ttcaatccct
    15901 tcctggcgcg cccatttctc cagcttttta agatttttac gcaggcgatt agcgtaatct
    15961 tccgccaccg tcgccggttt actgtccgcc gtggtttccg caatatgata gtttttctgc
    16021 acacagtcca gcgggccatt cttggcttta aactgtttgt cggcgcgtaa ttgcaggctg
    16081 cccagcaaat cgggcgaagc gctgaacagc gacaggttcc agccgccaaa ctgatttttc
    16141 atggtacggc ccaacaggct gtgcaacgca atcagcgccg gatcgctgtc cagacgttcg
    16201 ccgtaaggcg ggttactgat caccgtacca tacgggcctt tcggcaatgg attactcagt
    16261 tgcgccacat ctttcacttc aaaagtgata agctccccga taccggcgcg acgggcgttg
    16321 ctgcgcgccc gctcaatgac gcgcgcatcg ctgtcggaac cgtagaaatg agaggaatac
    16381 tccgccagcc ccttacgcgc ccgggtctgc gcttcggctt tcacttcctg ccagatagcc
    16441 tcgtcatgct gcgcccagcc gctaaatccc cagtgaccac gatgcaggcc cggcgcgcga
    16501 tcggtcgccc acatcgcggc ctcaatcaac agtgtccccg aaccacacat agggtcgagc
    16561 agcggcgtac ctggttgcca gccggaacgc ataacaatcg ctgccgccag cgtctcttta
    16621 attggcgcca gcccggtgcg atcgcgataa ccgcgcaggt gcaggccatc accactgaga
    16681 tccagcgcaa tgctggccgt ttctttattc agccagacgt taatacggag gtccggcgat
    16741 tcgcggtcca catttggacg cggaagattt ttccgcgtaa acgcatcgac aatcgcgtct
    16801 ttaactttca tcgcgccata ctgactatta cggatggtgt cgttcaggcc gctgaaatgc
    16861 accgcaaacg tcgcgccagg attaaaaatc tctgtccagt ttatcgcctg aacgccgaag
    16921 taaagatcga gatcgctgta gaccttgcac tcacccatcg gcaggataat acgcgaggcc
    16981 aggcggctcc acatcaggct ctggtaaata agccgcgtgt cgccctgaaa atggacccca
    17041 ccctgaacaa cctgacaccc tacggcgccc agtttttcca gttcaatttt taacagctct
    17101 tccagcccgc gggccgtact ggcaaacaga gaattcatat tgtcactttt acgctaagaa
    17161 aattgttgcg cattatagct aatctcacgc ccatgtcata aagttgaagg cttattttca
    17221 tttgagggac tgtacggtgg cgacgttatc acggctcttt attcatccgg tcaaatccat
    17281 gcgcggcatt ggcctgactc atgcgctggc agatatcagc ggcctggctt ttgatcgcat
    17341 cttcatggta accgagtctg acggcacatt tattaccgcc cgccagtttc cacaaatggt
    17401 acgttttacc ccctctccct tacacgacgg cctccatttg accgcgccag acggcagcag
    17461 cgcgctggtt cgctttacgg atttcacccc gcaggatgcg ccgaccgagg tctggggaaa
    17521 ccattttacc gctcgcgtcg ccccgacggc gattaatcaa tggttgagcg gctttttctc
    17581 ccgcgatgtc cagttgtgct gggttgggcc gcagttgacg cgccgggtta aacggcataa
    17641 cgcggtgccg ctgggatttg ccgatggcta cccgtattta ttgaccaacg aagcctcact
    17701 gcgcgatctg caacagcgtt gtccggcagg cgtacaaatg gaacaatttc gcccaaactt
    17761 agtggtttcc ggcgtagcgg cctgggagga agatagctgg aaagtgcttc gcattggcga
    17821 tgtgattttt gacgtcgtga agccctgtag tcgctgtatt tttacgaccg tcagccctga
    17881 aaaggggcaa aaacatcctt ccggcgaacc gctggcgaca ctgcaagctt ttcgtaccgc
    17941 ccaggacaat ggcgatgtgg atttcggtca gaatctgatt gcccgcaata gcggcgtcat
    18001 tcgcgtcggc gatgaggtgg agatactggc gacagcgccg gcaaaagctt atggcgccac
    18061 aacgctcgac gacagcgtta cgccagagaa acacccggac gggagtgtaa ccatcgactg
    18121 gcaggggcaa accttctgcg ggaataatca acaggtgcta ctggaacagt tggagaatca
    18181 gggaattcgt attccgtatt cttgccgggc tggtatctgt ggttgctgcc ggatacgttt
    18241 gctggaaggc gaagtaagtc cgctgaaaaa atcggctatg ggtgacgatg gtacgattct
    18301 gagctgtagc tgcgtgccta agaccgcgtt acgactggaa aattaaaccg cttgttcaag
    18361 gctgaaactg tgacagtgaa cctgcggttt cagcctgtcg ttcataattt taatcgcatc
    18421 gccaagctgc atggttcggc ctgctatcac cacgcctggc tgtgccagca gacacaacgc
    18481 ggcattttct cccggctcaa cgaccagcaa attaacctgt tccgccgtat cgcttaacca
    18541 gacgcttgcg gcatcacccg tgcccggggt ccacatttcg ccatgcgcca caaaatgcca
    18601 gcttttcggc atctgcggtt tgagatagcg aatcgccacc agcgcattca ataccagctc
    18661 cgcgcgttgc tctttggtta attcgaaatc ccggcatttt tcttcaaagg aaaaatagag
    18721 cgcggcatca tccacacaaa aaccggtcgg gcaaaacgcg tccggcgtaa gcattttacg
    18781 agagaagcgc gagcgaaaaa gcataccatt ggcgagatcg agcatcatac gatcgtgctc
    18841 ttcatcataa taccagcgcc agttatcgtc aggtttaatt cgcatcacct ctctcccgct
    18901 tttaagcaac tcgtaacagc attgtccttt tgccgcttcg tttattaccc caataataaa
    18961 agcctaaaat gtctaaataa gcaacagtgg agaaatataa aacaaccagt gccggaaata
    19021 aagccctggt tgtctgataa agggtaaagt ttagatgtgc gttacgattt ctttaatcaa
    19081 tggcgggcct ttaaaaataa agccggaata aatttgtacc agcgtagctc ctgccgctat
    19141 cttctcgcgc gcggcgataa ctgagtcaat gccgccgacg ccgataatag gcaattgtcc
    19201 ttttaactcc agggataaac ggcgaataat ttctgtgctt tttaattgta atggccggcc
    19261 acttaatccc cccgtttgct ggcaattttt cattccttgt accagagaac gatcgagggt
    19321 ggtatttgtc gcaatcaccc catcaatatt atgacgaagc aggctatcgg caacctggat
    19381 caattcttct tcacaaagat ccggcgcgat ctttactgcc accggcacat atttatggtg
    19441 gatcacctga agatcgtttt gcttattttt aatggcagtt aacagatcgt ccagcgcatc
    19501 gccatactgg agcgtacgta accctggcgt attcggcgaa gaaatattaa tggcgatata
    19561 acccgcataa gcatagactt tttccataca aatcaggtag tcatctttgc cattttcgac
    19621 aggcgtatct ttatttttac cgatgttaat tcccagaata ccatcaaaat gggctttttt
    19681 aacattctcg accaggttat cgacgcccag attattaaag cccatccgat tgattagacc
    19741 ttcagcatcc accagacgaa aaagacgtgg cttatcgtta cccggctgtg ggcgcggcgt
    19801 cacggtgccg atttccaggg agccaaaccc catcgcgcct aatgcgtcga tgcactcccc
    19861 gtctttatcc agaccggcag ccagccccag tggattttta aaggtaagtc ccatgcaggt
    19921 aaccggcttt gtcggtactt tctggcgcac cagcgcttcc agcggcgtac ctgtaatgcg
    19981 gcgtaattgt tgaaatgtaa attcatgagc gcgctctgga tcgagctgga aaagggcttt
    20041 acgaacgaag ggatagtaca tgaactctcc tggattcccg gtgtgcaaac cggggacgta
    20101 ttatgggcga taacaaagca aaagggaatt gacctatggc aataaatagc aatcgttttc
    20161 cttcattctc acttcacgtt tcgccaggaa gcgtcatcat ccggcaaaaa aatacccggc
    20221 agcgctaacg cttaccgggc atgttttacc tctttataac ggatactgtc aggctaacgc
    20281 tttagttatc ttctcgtaca gatcgccgga aagattctcc agtcctttta actgctccag
    20341 cgccgcgcgc attttctcct gacgcttatc atcataacgt ttcagacgaa tcagcggttc
    20401 aatgaggcga gatgctacct gcgggttacg gctattcaga tcggtcagca tctcgaccag
    20461 gaactggtat ccgctaccgt cttgcgcatg gaacgccgcc gggttgctgc cagcaaacgc
    20521 gccaattaat gaacggatgc ggttcgggtt gctcatactg aaagaacggt gtttgagcag
    20581 gctgcgtacg gtttccagta cattttccgc cgggcttgtg gattgcagga taaaccattt
    20641 atccattacc aggccgtcct gatgccactt atcgtcatac tcctgcatca gcgtatcgcg
    20701 gcacggcaac tgcgccgcca ctgcagcaga cagggccgcc agcgcatcgg tcatattatt
    20761 ggcgtcgcga tactgtttgc tgaccagcgt attagccagc tccgtctcgc cgaacgtcag
    20821 gaagcgcagg caagcattgc gcagcgtgcg cttaccgata tcgccgtgat caacacgata
    20881 ctcatccaga tgattggcgt tatagatagc caggaactca tccgccagtt ctgccgccag
    20941 cgtacgcgtt agcgcttcac gaacttgcgc aatggcgatc gggtcaatga cctcaaacag
    21001 ctccgcaatt tcattggccg aaggcagcgt taaaatttct gcggccaacg ccggatcgat
    21061 tttctcatcc aacagtactg cacggaacgc atcagcgaca tgcaccggaa gcgatagcgg
    21121 ttgcccctgc tgatgacgcg ccacattcag tttaatgtat gtggccagca ggctttgcgc
    21181 cgcatcccaa cgggagaaat cattgcgcgc atggcgcatc aggaacgtca actgctgatc
    21241 gctccattta tattccagct tcaccggcgc tgaaaactcg cacagcaagg ccggaacagg
    21301 ctggaagtag acattatcga aggtaaatgt ctgctccgcc tgcgtgacgt tcagcacggc
    21361 attgaccggg tgaccgcctt tttgcaacgg aatgacgttg ccttcgttat cgtacagttc
    21421 gatggcgaat ggaatatgca gcggctgctt ctccgcctga tccgccgtcg ccggagtgcg
    21481 ctggctgatg gtcaacgtgt actgctcggt ttccggatta taatcatctt ttaccgttac
    21541 aatcggcgtg ccggactgac tgtaccagcg gcggaaatgg gacaaatcga cattagaagc
    21601 atcttccatc gcctgtacga agtcatcaca cgtcgcggcg ctgccgtcat ggcgctcaaa
    21661 ataaagctgc atccccttct ggaaattttc ctcacccagc aacgtgtgga tcatgcgaat
    21721 gacttccgca cccttttcat aaacggtgag ggtgtagaag ttattcattt cgattacttt
    21781 atccgggcgg ataggatgcg ccatcgggct ggcgtcttcc gcgaattgta aaccgcgcat
    21841 ggtacgcacg ttactgatgc ggttcaccgc gcgtgacccc aaatcagagc taaactcctg
    21901 atcgcggaac acggtgagcc cctctttcag gctcaactgg aaccagtcgc ggcaggtgac
    21961 gcggttgccg gtccagttgt ggaaatactc atggcctatc acgcgctcaa tatcgagata
    22021 atctttatcc gtcgcggtat cggttcgcgc cagcacgtat ttggagttaa agatattgag
    22081 acctttattc tccatcgcgc ccatattaaa gaaatccacc gcgacaatca tatagatgtc
    22141 gaggtcatat tcgagcccaa aacgcgtttc atcccatttc atggaatttt tcagcgaggt
    22201 cattgcccac ggcgcgcgat ccagattgcc acggtcaacg tacagttcta atgcgacttc
    22261 acgcccggag cgggtggtaa aggtatcgcg cagcacgtca aaatcaccgg ccaccagcgc
    22321 aaacagataa cacggtttcg ggaacggatc ttgccactga acccagtgac ggccattctc
    22381 cagttcaccc tgcgcaacac ggttgccatt ggaaagcagg aacggatatt tgcttttatc
    22441 ggcaataatt ttggtggtaa atcgcgccag tacgtccggg cggtcaagat accaggtaat
    22501 atggcggaag ccctccgctt cacactgggt acagagcgca tcgccggact ggtacaatcc
    22561 ttccagcgcc gtattcgccg ccggacttat ctcgttgaca atgcgtaacg taaaacgctc
    22621 tggcaggtcg ctgatgataa gcgcgccctc ttcttcctta tatgctgtcc acggcgcatc
    22681 gttgacgtgg atagatacca gcgttaaatc ttccccatca aggcgaagag gcgcatcagg
    22741 cgcgccatga cgaacagcct ggcttattgc ggtgaccacg gttttttcgg catcgaggtc
    22801 aaaggtcaat tcaatatcag taatctggta atccggcgcg cgatagtcat ggcggtattt
    22861 ggcttgtggc tgttgtgtca taaaaaacct ttcgcatctt tgtgtagagt gtcgactcca
    22921 gtctattcct gttgcgcaaa tcgcgctacg cagaatgttc atcttttcag gcacaaacgg
    22981 cctatttgct acatttttat aatatgtact catagttttt aaaatcgata aagatcgtcc
    23041 aggagcgctt taaacaaggg atgagcgaga tcgagataaa gctttattaa cgaactttaa
    23101 cgaacttcac agaccacttt tgccccatcc atgccccaca cataatttta gtcaacgcca
    23161 gaccccatca gccctgcagg gcaaatcgat aacaaacacg cccgcagtat gttccccaaa
    23221 atttaaaaac aagtggttca tgccttgaca gacaaaaccg ccaaagcaaa atactgtata
    23281 taaaaacagt ggctggcgaa gcacgtatgt tcgtagaact ggtttatgac aagcgtaatg
    23341 ttgaaggact cgaaggggcc agcgagatca ttctggccga actgacgaag cggatgcacc
    23401 agattttccc tgatgccgaa gtgagggtga agccgatgca ggcaaactgc ttgaatagtg
    23461 ataccaacaa aagcgatcgc gaaaagttaa acaggtggct tggctggttt cagattacgc
    23521 gggtaggatc agatcactcc aaataccgac gacatagaat taggaattca gtgatgaatc
    23581 aatgatggca atacactgtt cagaatgcca tcgcgtatat gcgagcacag tgcccgtatt
    23641 agagaacatc ggagacggga agtaaagtat cggggtctgg tagaccaggc tgatgcaacg
    23701 aagccagcct ggccagtcat ctgtaattgg ttgagagggc ggagtcctgc gtaccatgag
    23761 taagataatc gtctaaaacc gtaaattttt aatggaataa gtcttaatct gtacaaaggc
    23821 atattgcttt tgatatataa accccctcaa tatagacgtg catttatatc aatgattatt
    23881 taaaggagta gtgaagtatg ttcttaacat ttcctaatgt agcaataact cgagataaca
    23941 ggatagacaa attatctgaa aatgatttag aactcattcg tgatacggct atacaaaatg
    24001 gcggaagaaa gatacaggta caattacgtg atttattata tgaagtaagt aatcgtgctg
    24061 ttgaaggtga taataataca ttcaaagtta gtttttctac tacagaccga gccatgttta
    24121 gggaacgtca tattgaatgg cagggaaacg ctataaggtt agaacgacaa ttaaatactg
    24181 gactgaatgt gtcgcgtgga aattttttaa atatgtcgac cacatcattt tccaataaca
    24241 gtcaggagtt agcagcccac agttcaccag gagcacctgc tatttttgat acatctaata
    24301 aacaacaatt agtggataag attgatttat gcagtttctc accaaatgtt gatgaacttt
    24361 catgtacgga agacaactta acatgcccgg taatgttagt tgttcctgaa aaaggcgttt
    24421 ttgtaaaaac tgggccagag tcaaacatat gccaattatt tgatgaaaca gcacttatcc
    24481 aacttattat tgacggtgcc acacatcctg ttagtagggc tccattatca ctagatatga
    24541 taataaataa aaatgaatgt tattttgaca ctaccaaagg taattttata atcccataat
    24601 ccaaatatta ctaatacctt tatatataga gcaactctat tagagttagg ctattttcta
    24661 atcactccgg cagtctatgt ttcgatgttg attgctggag atttaccttc cctatcatca
    24721 cctcctggct tcacttcatg atgctttccg gaacctttct gtacagcgtc gacagtctca
    24781 catcataaat aatcgctacc tgctgtcgcg gtacccctgc cctcgctgcg cccattgctc
    24841 cggggtgagc tttggacgtc tgccaccaat acgcccctgc tcccttgccg ctgccagccc
    24901 ggcgcgggtt ctttccacaa tcagtaccct ctccatggta aaccgggtgg atacctcaaa
    24961 ttctgactgg ccggataagc cagccagtca gtagtcgtta ccgtgacaat ttaattatcc
    25021 atatatcaca aaatcacttg cttacgcggt aattaatcca tttggttaat aaaaagttat
    25081 ttcgtttacc agcatatttt atcccatggt agttctggga ttaatgtatc tggcggccag
    25141 attttacacc acggaaacga aatacctggg aatcctttat taccgctttc agtggccatt
    25201 gcagatgaag aaaatgttat gactgatatg gcaaaaacca gcgctaacaa tacactgtta
    25261 agtttattca taatatcact cacataattg atagctatgc ttcatcctta acttttaccg
    25321 caatcctttt atcaggataa agcagaaaag aaagttttcc ttgaatatct cttgattgtt
    25381 aagtaaatat ttagtttaaa agtaaataat aagtacagta gttttttctt ttctaaagaa
    25441 aatttactta tatcttagtg acttcgtaca gatacctgaa ccgaattaac acctaaaaac
    25501 tagcaagtca gtagtagtcg ttattgtggt aattcaggcc acctgatttc cgtgaaggtg
    25561 gctgagtctt tcacgccgct caaatccagc gttttaagcg ccctgatata cgccatccat
    25621 ttagtcaggc tgtccttatc gtcgtcaccg atttcaccca acgccagttc ggttcgccag
    25681 tcggcaatgg tgctgttagc ggcatccagt agtttctgtc gggtggtttc ggccttagcc
    25741 tgatagtcaa cgggaacagc cagaacagtg ccgttcgaat atttccagtc gccatagata
    25801 ttaaatccgg ctggtagttt attgacctca acaactgaaa agccagccgg atagagtcgc
    25861 gacacatctt ctgatacgga acggattata ttttcagaat caatgcacaa cttatatttt
    25921 ttcgtgaatt tactcagcga ctcataaaaa tcctgaccat cttcactacg aaaatacaga
    25981 aagctgttat cataatccgg gtcatcagga atgtatctgg ttacgttttt taattccatt
    26041 atattcacct aaattatcca ttaattgtac gccagccatt acccacccac atttgtagcg
    26101 gtctatacgc aaatgtcaca ccgtatgctg ttgttgggtc atgtctggcc tgtgttaaaa
    26161 agcaaccagc aggcgcttct gctggtccat attcatctac tttgccaggc catacaggag
    26221 caccgcgctg gatattttgg acataacgat tatctgattc gccttttgta tatacgtttc
    26281 ctgatgttaa ataacgggcg tcgaaattac cgtaattatc cggaataact tgtccattaa
    26341 caacaaactg aatactgcca tcggtattac gctggctgta taaatgccat ccctggtcgt
    26401 catccagctc aataaccgtt ggtcgatttc cgtcacccca caaatgaaat tgagcattca
    26461 gcacggagtt atttgagcta gtcatggtca ttcgtttggc atcgcctgcg cgaatggctc
    26521 ccagaacctg catttcaccg ggagcgacac gaacggtgtg ctggctattc gcaaacgtat
    26581 ccagtatccc atcgccgttc tgtttaaaac cagtgtcatt atcaccaaga acgatcgaat
    26641 tgccgcccag cgcattatca gtaccaatgc ttagcggacc gttaagacgc cctccggtaa
    26701 tcggcaatgc acccacatca ctggctgacg gtttatttgc ggtgttgtag tcaataaccc
    26761 acgggcgact ggtattcggt acagttcccc agtcctggcg ctttgcgttc gcgccaatat
    26821 gggcataata atgctgaaac cagacgtctc cgattttctc aacaaacaga tatccatagc
    26881 tgtacaactt gctgccaccc ggataggtgg gaaaatcaac gaccgtatca gaattcgaca
    26941 ccgccacctt ccaccatccg ggtgcattag ctgatgccat tgtgccgtta tcggtaattt
    27001 ctccaacagc atcggcggaa atggccccca catctgacgc ccacaaagtg atatcaccgg
    27061 tcagtggttt actgttaacc cgccgtgtcg ccgggacggc attttttgcc agatttatcg
    27121 tttcgcctaa accgaggtat gtgagaatat ccgcaatact ggcttttccg atgatgtcgc
    27181 gcccaacaga agtaagatct gtctgtccgg ctgtatcatt ccccgtgaaa tacggaagtt
    27241 tatctgcacc agtagccaga ccagcgagcg ccgtcagcgt ggcatcaaga gtctgaaaat
    27301 ccttaccgaa cgcagcggac attttggcga taaagccgct caggtcacca tcatcgagta
    27361 catcctttcc gctcttactg gctgtgtact gtgccagtgc tgcagcgatg aagctcgcct
    27421 gacgcagcgc tttatttacc tgtgcacttg atgccttgcc cgcagtaaaa ccagacagga
    27481 gcgccggcag cgcttcccag tcaggctgtg atgtaacatt agcaccctta cccgtcgcaa
    27541 acggtttaaa atcattttta gccatcagag taatgtcccc catgaaccgg catcaaaccc
    27601 gctgatatat tcgttatcca tatcaaaccc aaaaaacctg tttccttcag aaggcgtttc
    27661 caccgaaggt atttcaatac ttccgcccca tacaccagcg gcctttaccg tcagataccc
    27721 ttgtcgtatc gcagcaataa gttcgagaga gaccgatgaa atatctgttt caggaaaaac
    27781 ccagatacct atggtcatat cctggttatc gacgatctgc atcttcagac cggacccgtc
    27841 cagtgcggcg tcaagaatgg gaggcaggga gtcgtttctt ccgtcccagt tgttaattgc
    27901 tatcttcgtt tttagaacga tgcgataggt ttcatcgctc agcgaggtat aacccgaatc
    27961 cggatcatat ggcccctgcc agacgccctg gtcatatcca agtccgtcag tgtcccaact
    28021 gaaatagaca ccgcttattg gctggcttac aacacggctt aaccctatcc actggccgag
    28081 aatatcgagt tgtattcctg tcgcataatc aatatcaaaa gcgcttatta gcccatttat
    28141 tgcggctgag gtttcagcta acggcctggt cactaaatcg atgtgttcaa cgaatttagg
    28201 ttttgtcgca tgatagttag taattaagtc cgtatatttg ctcatgctgc caccgtaata
    28261 atgatatttt ccggcttaca ggaggcagat tcgtcgtaag caatattaat attcgccgca
    28321 tcaacggttt caggagattt gccgatcagc aactcctgaa tatcgtaata gcgcgcatta
    28381 ccaccactga cgaccccaag gttagcagga gaataaatcc ggctcagcag tacctggtca
    28441 ccaatcatca gtctgttaat gtaatccgca acagcctgct gaatctgcac acctatctga
    28501 gaggtgtacc cggcaaaaac ttttaaggtg atttttccgt aaacagggac atcagttggt
    28561 cgcgaaaaac tgattatgtg aggattacca tatttatccg gtacggttac ggatgttttt
    28621 ccccaggtcc ggaccccctg ccctttattt ccccggatgg tcctcgctat ttcggttaca
    28681 tcgccaccat caacaatggc cgagatggaa tgcggaggaa gcccgttacc gtcagtcttt
    28741 cctgtatcat tttcatagag cttgtggcgc gtcacaccag caatattagc gatcgccccg
    28801 tccacgcctt caaatggtgt gatggatggt atcgcgacac tctgcccctg cctgatgcgc
    28861 agttctgcgt ccgtttctgc aggtgcgcca acggtggccg ctgccgggtt ggttactgac
    28921 gtccagccac gggtcggtgt attgatagtg gtaatcgtcc cggcaggagc tgcaaccgct
    28981 ccgcttttgg aacaaattgc agttgccgtc acggtgccat caacaccaat caccactgaa
    29041 tccggaagac gccagatcac gttattggtg tctttcacgg tgccgttcgt aatggttgtt
    29101 cctgcggtgc cagtgagcag taaatccacg gtagagttcg ttgcaccttt gcgcgcgata
    29161 ccgttaattt ttacgttact ggtcagcgct gcgccgtaac ctgtagcagg tgagaagcag
    29221 ttatagacgg aaatggctgt gttattggca tcgtgaatag ctagcgccac cagcgccacc
    29281 atctggccgt ctttgctgtc cggctccaga taagcgtcac taccataaat ctgctggaaa
    29341 tagctcgtca gggtatcgag tatcgtctgg taatcaggcg cactgatccc ctcagcggtt
    29401 accgttgccg ataagccgag tgtgtccaaa ttgagggcca tttatgcctc gctggttact
    29461 gtcgttgttc cgtagatagt gtcgatttca gcgaaaaact ggacgcggcg cgtcgtcgtg
    29521 ttcactgtgg tattgaaaga gaggatggat ttcacgcccc gcgtttcgag gatgcgcttg
    29581 cggatcgcca gattgtaggt ttccggcttt tgcttaccga gcacagactg aatccacggt
    29641 gttccctctg tcttatcgag gaaccactgc ccgtaccaca atgcaaatcg tgtttttacc
    29701 gcctgcgcga cagcttctgg cgagttaatc agccaggtat catcgccact accaaaagtg
    29761 taatcacctt cggtatcttc gcgtcggtat cgcatgtctg acctccttat tcaccaccat
    29821 cggacggcac caatcaggct cgaaagcccg aaaaggaaaa atacaatcca tataagcagg
    29881 aatttccagt tgggtaattt ttcgcccata actcgcaact ccattatcag tttgctaaaa
    29941 tcaatcacat gttctccctt gccatcctca aggtgtagaa agtaaaaagc cccgaagtgt
    30001 tagcgcaccc ggggcttttg tctggttggt agtttttaat tcggcgcgcc agtattcccg
    30061 ccacccgtct gaacgccgct atgagtgtgc gtcatcaggc tcttaccgcc cgccttcaca
    30121 tcgtttgtca ccgtgacagg accgagcatc gttgcgctac cgccgccctc acccatcccc
    30181 tgcgacagat tgccgttaat ggttacgtca ccgtttagcg taatgatggg tgatgtgatc
    30241 gtggttccgc cttctgcagt agccgtcagc gcgccggggg ttttaacagt aacgttatgg
    30301 cctgcggcca cttccacaaa agcagcccca tcatcggtac gcaattgtgc ggcgctggtg
    30361 ctgattccgc ttattttctg cgcctgcgac tgcggcccga cgatacagaa cgcatccgat
    30421 aaatcatgca cccgatcgtc gacaggctcc tgtaccccgc cgttctgcca ccagaaatcg
    30481 atgcagcgat cggcaaaaat caccagacac tcatcaccag ctttaaccgg gaacgttagc
    30541 gtgcagccac cgccgcgagg aaataccacc ggcacatcca ccagcagcgg taatgtcgtc
    30601 gactggctaa cgccattcga atccggctca tagcctttga tagcgggttg aacaactgcg
    30661 gttacggtgt cgggatcaaa tgactggacg atgccaggca ttgaaactcg cagtgcagac
    30721 atgacagaac caacaagcct tgtatcagcc tgttctttac tgccgagttg agaggaaagt
    30781 gaaactggca tattttctcc agacataaaa aaacccgctc atcggcgggc ttggtatggt
    30841 agtcatagct tatgctgtta acgagtcgtc ggggttattc atcattcggt ccactagagc
    30901 atctatctct tcagcatctt gtaaggcact aattgccgta attcgattaa ttttgcgttc
    30961 aagtctgtaa tcagcattta cgcgctgagc atgtaacatc tttaacttaa tgccaatttt
    31021 acggacttta tcaacatcta cgccgttaac tttagcagcc tcaccgttac aaaaagctgt
    31081 atagagtcgc atgtgagaac cgccaggtaa tctctcacca tcagtatcat gggtaggcgt
    31141 cagattgtta gtgattctga gggctgaatg atacatgccg tagtatgacc tgctgatagc
    31201 attacgtgtc cattgctcac cattgtgctg caatgattct ctggctaatt cgagaaaaca
    31261 attatgcata acaggcatta gaagtctcct gcctggaaac aaccaacaca ctctgaattt
    31321 tccaaaccag cagcgatgag ttcattggca aggtcgttat tcacttttga caaaagtgct
    31381 gggtcgtcag ttttaatttc tacgaaaaat gtgttcagct cattcatgac ataaaaagca
    31441 tgcgcaccag ccagacgtaa acgatacttt tcagcaatag tcatcatcaa ttggccgatc
    31501 gccttaaggt catgagaatg attctcatga tcgataagat aatcaagcga ctcattacac
    31561 ttgagcaaat cgtctgcctt agcaacttcc atcgcattaa gcataggcat tacctttttc
    31621 agcaaatcta aatccaccca atacgcagca tttatagcca cttcagaaag aattcgagga
    31681 ttacgcgagt tgatcgctct cttaataatc tcgtattgct taacgtgata ccccttgttt
    31741 ctcaacgcaa tcgtatagtt acaaaacgaa acagaatcgt ccggggctat cgccaatgac
    31801 ttttcacaaa gggcacatcc ctcttcaact tcgcctaaaa caagcttagc taatccctcg
    31861 atagaaagcc cttgataata ttcaggaaca ttcctggcgt cacgaatgac ggcatgaatt
    31921 tcaaactcac tgagtaggtt ttctccctga gtgagtgagg gaccaaggat ctctaaaagc
    31981 tctccggatt taggctgcgc taaactcatt tagttgtaat tcctgactgg gtgacatcaa
    32041 agttgatggc aaaacgcctt caaaagtatc tgcagtgtaa tgggtaaagt tggaaaacga
    32101 cagcacgatg cgcacatttt gctgattttc agaaagtttg gttagctaga aatgtcaatc
    32161 gatttagttt caccgaggca ccttcttaca aggaaaagcg cgttcacttc accttccggc
    32221 agtcatacgt ccagaactct cgcggctcgt ccatattttt gcggataact tcaacattga
    32281 ggatcggctt gccatttctg gccacaaagt ccatccctaa ccaacgtcca ttacccggaa
    32341 ccatccattg gatgttcaca ttgtcataat cccctttttg tttgagaaag gtgattttct
    32401 gtgtctccgg tttctgtcca ttaatccttg caagtccgtc ttgcgctttc cagttgatcg
    32461 tgaatggtcc gcacccggta tcagcaaagg aagtgaagga gatacagaca agtaaagctg
    32521 ccaacaatag tcttttcatg tgtatttcgc cgcatcaatc cctttcgagt taagcaattc
    32581 tttgccatct ttagccaggc aaagcaggtc catataccac gcctgcccgc gagtgtcgcc
    32641 agtataatcg atgctgccca caatgtaatc accgtcagta ttaatgctgg caggctgtga
    32701 catgccgggc aggccgttaa cgtagagatt accgtcgctt tccgattcat ccagccgtgc
    32761 tggagattgc gctatctggt cattactcaa agaggtccgg tagacagatg cctgatccag
    32821 acgaataagc ccacccagct taatgtttgg attaatcagg cacctgacgt ttacgcctgc
    32881 acccattgtt tgctgaggcc taccgattag ccctgtattg gcattcagca ccgtagcgac
    32941 accgatatag ttatcttccg gcacaatgtt gacctgattg ttctcatacc accagtaagc
    33001 gttacactgt ccggcgatat gattcatcag cctggctgtg ctctgataga caacccgccc
    33061 acgggggaag accgtctcag gcatgtcagg aactgcacct gactcgatac cataaggccc
    33121 gaatgatttc atgcccaggc tgaaaagatc actgtacttc cagccggcag ccactgtggt
    33181 tttcacactg gcgttcaggt ggccttccca actgtcgata cactgcaaca tgatccaact
    33241 gtctgtcgca ttatctttcc cggtgacagt aaaacggata tctccgttga atatcatacc
    33301 aacgttttca tcgggataat tacccgttgc atccggttgt cccttatatc cggctataac
    33361 ctgtatacgc gagaattcct tctgcataat ccggttctga gtggtagggg acaggttata
    33421 aaccttaaaa tttccaacga atccattaaa tatggtcgca ggcattttct gaatattgaa
    33481 agtgacttta agctcagaaa tttttatccc gtcgccctta tcgtcaacca gcaataattc
    33541 aaagtgacgc atccagtttt ttgacattgt tactccgtga agacatagag gtgtgagaac
    33601 gttccgagat cgaattgcgt cgggttttcc tgtcctgcca cgtcgcagag taccaccagc
    33661 gaaaacccga gattcatata tcgatactgc gccagcaggt cagcccccgt aatcatcggc
    33721 atacctgaga taatggcgga accattgctg tcagcaagat ccagaaccca gtactctccg
    33781 cgccagatga cagacaggtg ataaaccgta ccgttaattg tggtggcaaa agtctgatta
    33841 tcagcgacca gtgggatttc tacggcctcc atgaatcacc ttcccagaaa taaattgctc
    33901 agatacccat cgacagtggt gacacctttt tgcgccatct gtggcagcga tttcagaatg
    33961 gaattattcg gcggtaccgt tgttttggta cctgtattct gtacagcaga cgtccctact
    34021 ccctcggtca tattgttttt cgaggcaacc ctgattgact gcgtggaggt aataatcacc
    34081 tccctgaggg taagggtcgc cagaagcaca ttctcactgc tcttgtcagt cgtcacctcc
    34141 agcgttttta tcaacatatt gttgtaaata cgcttgccgg ttgtcacatc gaaaggaata
    34201 cgatcccgct gcaggttaag cagctcctga tacagttctt tcgggctcag ccccagtgaa
    34261 agaccaatag cggaagtatc agcaaaatca agcagcgatc cgcctccgga aaatccggtt
    34321 tccatcacaa cttctgaagg gcgcctgaat gcgtgttctg atatgtaacc agcgccctca
    34381 ccactggcac cagcattcgt gggttgttca accggatgtt ccgtaatttc cagagcgtca
    34441 gtatgctttt cggtaataac cacatcagga ataattattc ctatcgagcg ggttcgctgc
    34501 tgcagcaaaa cagataaaaa atccattacg caggtccttt caattgctgt accgccctgg
    34561 cattgacagc accctgcttg tcagcgatca gattagccgc ttcctgagga ttgttcacgc
    34621 cgtggacatt tataacagtc tgctggttaa ggctaccacc agcggcctga tacgccagcg
    34681 ggctgttcca gtttgaatac ccttctttgc gcgccatcga ctgcatcagc gcggccatag
    34741 tttccgggtt ggcgaggttc aacacagtgt tcggtgaaac gcccatccat tttgcaacat
    34801 cctgcgcata ctttttcggg tcgttgttgt caccagccgg cgcccaggta ctgacaatat
    34861 cctgaatggt ctgtaatgcc cgcccggttg ttttccctgt aaagtagcgc ataagctggt
    34921 ttttcatcgc ctcccagccc tgaagggcgg actcgaagaa ccggaagccg ttaccgccca
    34981 ccgggcgaat gttacccgga ttgttgttcc tgtcggctaa agtgcgcttt gcggattgtg
    35041 catgttgtac aggttctgct ccaggaatat ccggctgaat attagcgcct ttgacggtgt
    35101 ggggattgcg gccaaaatcg gtatcaatcc ccagtgcacg cattccatcg ccaatgtttt
    35161 gtttggcata atcgatagac gactgcgcac tggcgacgat attctcccga tcgtcataca
    35221 ggtaagccgc gtaggccatc cagcctttta accacggcgg catcggtata cctgccagtc
    35281 tggcaaatgc gcccgttacc ttgctaatcc acgcaccggc gataaaggtc gccagcagct
    35341 ccagtgacgt tttccagccg ccaatagagt ccttaagttc gagcaggtga tcacggagcc
    35401 agaccatcgc atccttcgct ttgtctatcg ctggctgcca tttttcccag tcaataagac
    35461 tgttaccgcc ttctttccat gttttgtagt cttcccacaa gagaccgaac gccacgatca
    35521 gaccagtaat cagccctaca ggcgacatcc agaaagtaga gttaagtatc cgcatggcga
    35581 caaccagacc accgataacc tctatcaggg ttttcgtttc tttatccagt tttccccacc
    35641 agtcgataat atcccctaca ccttcaacaa ttcgaaacgc cacgcgaccg atgatatccc
    35701 cgagcgtcag aatacctttt atggctttcg tcagggtctg ctcgatgcgc gggaagttat
    35761 ccaggatgtg gcggcgcagc gtgtccagcg aacccgccag accaccagca agattagagc
    35821 cgatcttgtc acgggccaag cctgccatcg cgccgaactc gcgcagggag gtcatgaacc
    35881 tgttggagct tttggccgcc tcgtcagcat tgaaaccgat ggcctttgcc atcgcgctgt
    35941 actggccgga gaatccccct aaaccccggc gcatcgccat aagggtattt tcatcaatgc
    36001 ccagcatctg cgcatactgg ttagcccggt aatacggcat gctgctgagc tcctggccga
    36061 cgcccgtaaa aatggcggcc atatcgcgca tattcccgct ggcgtcccgg gtctgtacgc
    36121 ccaggcggtt cagaaagcct tccgcgccgg gattattacg cacaaaccgg gagaggcttt
    36181 ccagcgaagt ccgcgccgcg tccacactac cgcccacctg cgaaactgcg tagccaatcg
    36241 actgaatccc ctgaaccgtc gcgccggtgc gttgagatgc ccagtagaga ttatccagac
    36301 cggaggcaat tttcgccgta aacgcaacaa cggacagcgc cgcaccttcc accgccagcc
    36361 ctgtttttat ggcatttgcg gtgacgccag caagaacaga ttcaaatttc tcgtatccgg
    36421 cttcatcaat gccaaatcca agggagacga gaaaatcttt aatagtctca gcgttcatta
    36481 acctctctcc atttatctac ccgagcatcg ttatcctcgc gcatgtcgag gtagtcattg
    36541 agaagcgcga tgcggcagag atctaccgcg ccgctgttaa ggtctttctg gtcaatatgg
    36601 aaggcgagaa ccgggcgaag aataaaatct tcaccgcccg gcaggctgtt gaaggttatt
    36661 ccgctggcgg ggtgggcgtc ccgttggtag ggagtccttg caaaaaattt cccagagaat
    36721 cggcgaccac ccgcgccacc agctgcagca tggtcagcag gtcgatatcg tcaaacatca
    36781 actgaccgct gttaaacacc ggggcccatc cccccatatg tttgcgtgat accacagcca
    36841 ggcaaggatg aataatcgcg ttggtatctt cttcggtcag ggaagacagt tcctcagcga
    36901 tacgcggcag cagggtttca aacaccggct taagcgcatc aaacttagcg ctgtcgattt
    36961 tgccatccgc aggcagaagg gagcgaatgc ccccgaaatc tgacatcatg cccgccagca
    37021 ccggcagcaa tttacgggtg actttcagct ggtcaaaaac gctgagtttc gccacgcgat
    37081 aatcgtggcc tttgactgaa cattccatct gttaaaactc tccgagtacc tggtcgattt
    37141 tgccgcagtc aaatacccag ggcatcgtat taccggcttt cgcgttggcg ttatccggct
    37201 gtttctggaa ggccacactg cgcgccgtga tgatgtctcc gctcacctta tttcggatca
    37261 caatgacgtt gtttccccag gttcctgagg actgactctg tgcgttatac gccagcgaca
    37321 gttttttgtt tgtcggcgag gtcttcagca gattgacagt taccgtaccg cttttatccg
    37381 cgtgcaggct gtgcatcact tcgccgtcag caccgatggt catggtgttt ttggggccgc
    37441 ccattgcaac ggtgatcccc tcctctgaac tggcggaacc gtagcccagg tcaatctcgc
    37501 cagtcgggcc agaaatggac gcggtgacat ccataaaaga ataagtagcc attcattttc
    37561 cccttagcga acgacgttga tctgtacgtc agcgaaatgc actgcgccag ccagcttaca
    37621 ggaaacctga ataaccggtg ccttacgtgc ttcacggtct gcctgcgcct gctcggaaat
    37681 cggctgcgcg tagacgtaat acccttttgt cagcgcgtct ccggaatcca gctgcccgat
    37741 tgggccaccg ttccatacgc cagcagccac cagcccgttc gtcacggact gatccataga
    37801 ctgctcaaca ttggacagaa gacgtgtaac acccgcatcg gtctgaggca ctttggttgt
    37861 actggtgtac agcaggttat acaggttggt ctgaacgtag ttctgcagcc agtcgagccc
    37921 gtggcgctca tcaaagaaat caccgctgga catgacgccc tgctgcagga ttgccgtatc
    37981 gttctggtag tacacaaaca cgttgcagtt cttggcatcc agcgccgccg cctgatcagt
    38041 cgtcagggtt tcgtaagtga tccccggctc ctgtttaaat ttcagggtaa tggtggtatt
    38101 gctgccgttg aaattcaccg taaacgcgcg gccaaacgcg gacagcgcag cgtacttgct
    38161 gctggaagaa tactgtacga acgtgcgccc gtattttgcc gccttcagct tgtaggacag
    38221 atccccggtt gaagtggcgt caaaggtggc gggatcgctg gtggtaattg ccagaatgcg
    38281 gctgacgccc gaagcttcta cggctgcagc aaccttcagc cagtcgtcat ctgcaatatc
    38341 ctctttgtct gcaataccga gaccatacca gttggtgtag cccattacgg cgttaaccgc
    38401 atccatcagc ttttcagcag cacccgcctc acccgttgcc agtgttttag cccagcgacc
    38461 tacatacacc tctttaggtc gtggtgactg ggagaaatag actgttgctg cttcatattc
    38521 ggggctgtcc acgccgaaat cagatccgat gtcctccttt gaggagtaga ggcgaagacg
    38581 ctctttcacc ggaatgaccg tggatgtccc gagaataagc agtgaaccaa aatttcgacc
    38641 agtagccgcg cgcggcccaa tgatcacgtc gacattaacg acgtttgata caggtaatcc
    38701 ctgcggcata atttaatctc cgaagaatga aactggtgca tccaccagcg atttaatgcc
    38761 gtactcgcgc accaccttgc gacgaaggcg cacagtaatg tcgtaacggc gaacccactg
    38821 ctggttgata agttccggga aaggggtcag accggtgtag tcccccatgg acaggccaag
    38881 cgcgttcagt tcggcgttgt tttgcgcaac agaaatacca tcgcgaaaac gtgacgcaaa
    38941 cgtcatgccc gccgggccat aaaatgacgc catgcactca aaggtttcat gtcgccagag
    39001 ctgagcgccc tcttcagtct ggttagtgaa tgcgggactg ttatctatgg gccatccggt
    39061 aacgccgaac gcgcaccagt tcgtttcagc tggcagcagt ggcggctgat ctttctgcca
    39121 tcgggggcga accattccag tcggcaaacc ggaaacgttg cgtacccact ggcttaacag
    39181 cctgtcgagc gcctcgtcat aatccggatc gccgctgaca ggtgtaagcc atcccggctc
    39241 cgtactggaa ttattgctca acgggaaatc ctccatcgaa cggcagcagc tcgcaatgcg
    39301 cctgtacaaa gccggcgcca tatgcggtgt acgggtcgac gaatgtcaca cgataatcac
    39361 ggttctgata cgtcacgata tcggcatcac ggccagtctg cccctgcgtg agtcgctcag
    39421 tcgtcacgat aaggattgct ccactgataa cctgcccgga ctgcatgcgg cggttttcca
    39481 gtgaacggtc aacggtaaca accccggcaa actgcgtttt aacttcgctg tcgctaccaa
    39541 tcccgtcttc gtccactgtc tgtacccgac gcgttaccca aaggttgaag tcacaaaaat
    39601 ccgggtcgaa aagaacatcg gttacatcaa gagtcggcat ctttatccct cactacatgg
    39661 gttattgagg cgagatattt gccagtatcg taaagaggct tagccaaagt ggtgcccgga
    39721 gattcaccag cagcacgccg cgcaagttcc gctttcgcac ctttacgccc acggcgcgca
    39781 cgcgcttcaa cggtgctatc tgcaagcgga gtaaaattgg cagctttgat gtgatttttc
    39841 acccctcttg cagccactgt acctgcgcgg ttgagtgctc tttccgctcc cgccgcatta
    39901 ccatcaagcg cagcctgtgc cgcagcttta agctgtggca tcgtctggtc ttcaactgat
    39961 ttaacgccgg gtacaagatg cggacgtggt gggatgtttt gtgcaggtga accgtattcg
    40021 ttgatatacc caatcccggc attaccgaac gacacatcat cccgatcgct gtcttccgca
    40081 ggtataccga ccagcacatc ctttttggtt agcgacttta gcgcatccag tattgcctga
    40141 gcgttatcaa ccctcgttgt tacaccgctt ttgaaactca tagctggcgt ccccctgcac
    40201 cgaacatcgt gatcagctga taaaattcag cgccataccg ggtgttattc cagaagcctg
    40261 cgtcagggtt tagcgtcgcg ctggtgtcat agctgacgct taccttgtca acggacttgg
    40321 aggactgaac accattggtt gaaccgcccg gaccgccaac cagcatcgcc cggctatctg
    40381 ccgcccagag cgtcatatag tgcgcaacga acaactcggc aaagtacgga aacaactttt
    40441 tgccggtgac gttttcgctc agtagttcat cggccagatt cagacggaac tcgatttgtg
    40501 cttcgggata tctggcaggg tcagcaaact gcgggaagtc gcggcgaaaa tcacttactg
    40561 ttggcaggct ttgattcttt ggcatctttc gccccattac cgccagtccg ggcggaagta
    40621 atctgcgcct gcaggctgtc gttctgctcc tgcagcttga gcagagcgtc tttcagatcg
    40681 gcaatcagtt tatctttatc ggcaatctgc gcctgaaggc tgtcaataac gggttgctgg
    40741 tcatcagttt cattcgatcc gctttcggaa agctcagcgt gcgcccgggt aaaccagtgc
    40801 gacgcgacct cttctggtac gttatgccgt ccccggccaa actcctgttt tgactgatca
    40861 ccgagcgtca gcgtaaacgg ggtgtgaaca tggatggtaa ccagcttttc tttcgccatt
    40921 tttagtttcc ttctggcccc tttcggggcc attctggtta tcagataccg tccacgtagg
    40981 acagggtttc tttgtacact ggctcaaccg caccgagctt gccgtagtag gtcgcaatct
    41041 ggtacagacc acgatactga acaggaacgc tttgcagcgg aaccagtgga tagcggacgt
    41101 atttcttatc gttggtgtag gcgaccatac ggtctttacc gccaaccccg cgccctttca
    41161 gccatttgac cgctttgatt tccagcggaa cgccattctg gtggaaagcg atagtgttca
    41221 cagccagata agtcagcagt gactggttac ccgcttcgga aaccttacgg ctcgccagca
    41281 atgaatactg ctctggcgga atgcgcagat cagaaggcac gacggaataa ccggatgctg
    41341 cccaggcatt cgacagaatg ctgtttacgc tgtcgaggat ctcatcgttg gtggagttag
    41401 cccaggtctt cgttgcgttg ttcagcgtca caccaacgag attcgtcaga cctttcaaac
    41461 caagcgcttc gtctccgacg taaacctgtt cgtcgttatc catctgccat ttaagctgca
    41521 tcccgtcgta cttctgagtg tcgatcggac ggcctacctg ctgtgccgca gccagctcaa
    41581 caacagtcca tcccagctcc atcccccaaa ggttcagcgg attgccgtct ttactgatat
    41641 caacattaac gccagcaatg gcagttgaat ctttgcctac ccagttttta ccattcggat
    41701 tagcgccaga acccgccacg ccaaaactgg tattcgtcca gctggaaatg tcatctgcga
    41761 tagagacgtc ttcgcgcaac tggatatcac gtgtccaggt ataacccacc agtggcagat
    41821 tcagcccctg gtcgagtcgc tccagctccc cgatgagaaa ggcaccggag ctatcaacgg
    41881 ttgcctgatc aaaagtaatc attcgtctgt tccttaaatc ttccaggaga tttctgcgtt
    41941 gccgttagcg tcaccggccc ccgtaaaaaa agcatcaggt aacgcggctg ttttgcctgt
    42001 cacctctgcc gccgtgatcc caccaagcgg aaccgggatg gaagcatcgg ctgataccac
    42061 gatgtacacc acgcctcctt ttttaacgga cgaagcatca gtacccacgt ttaccgtcat
    42121 gtacccacgc ttcatggcgt cgcccgggaa attcttatca gtacccacct ggcgaaccat
    42181 gtctggctgc gatgtggtcg gatacggacg aacgtagata cccttcacct tgtcgacggt
    42241 gtcaccctcc gccagcggca cgaaaaagcc gtcagcgtcg tatttgccag ccagaccata
    42301 cgctgcgaag gcgttatcgg atttaaggat caccggttcg acggttaagt cctgcgggcg
    42361 agagatagcc ccggcaatgc caacaggcat ccggtacaga tatgcagtca ttggattatc
    42421 ctttgcggtt agaccagaag tcggcgtttt gtttgttcag ggaagcgatg ctggtcatgc
    42481 ccatgcctgg acgttgtgca tcgcccgtgg tgctgcgggt gtttctccct tttgcaatct
    42541 cagatacggc gttaaacgcc atatcaaccg attgtttagg taatttgcgg atatcagcgt
    42601 caccgacaac ctggcgaacc agtgttttgt ctgcggccgc cagcacatca cgtttaaatg
    42661 cggtcggttt caccttacgg ctcagatcga tacccgggat aatgacttca gcgcgatagg
    42721 cagagtcacc cgtaatcgtg gtttcctctt cgttgtcctc gccgtcgccg gtcgggtctt
    42781 tcttatcttt atcatcaggg gtgtcagcat tatcgcctgt tgccgttcct tccagcttag
    42841 ccagcagggc cttgagcagg gttttgatat cgtcctcgcc gtcgccggtc acatctccgc
    42901 ccatctccgg ctttttgtcc ggcaatggtt gttgtggtga aaggttaatg ttgagattga
    42961 cgccgcccgg cagatcacct tcatcccccg ttacagccgc tggcgctgag tccagcagtt
    43021 cgttcatggt gtccgagtca cctgttttga tggccgtgcg catgcgggtc caccagcttt
    43081 tcttttgatt tgccattgtg tctctgtctc caattgcaca acgatttccg gctctgcctt
    43141 tggggacaag agccacatgg tttccggtaa tatcgacctg ctcagcctta cccggctcag
    43201 cctgttcata ttccgcgtca tagccacacg acacttcgcg cagaccatct tcgataagct
    43261 gaatggcgct ttcgtctttg acgataaggt cagccagcat caaatcagac tgctcaccag
    43321 tcccgcgccg gacattctga agatgaccga ccgcaagctc tttccagttc tcgggattga
    43381 ccaaccggac gttcccgttt tcatcctccg gatgcaggat cgtgatgctc atcccttcga
    43441 aggaggcaag cgtggccgga tggaatacct gctcaggaga gcgcgttacg actatctcac
    43501 cgaacttgtc aggcttgagg tttggcagat cagcagcgcc gtaaagctgc ttacccgttc
    43561 gacctatcgg cacgtctcta cacagcagcg agccgtcagc cagctgatag cgggtttccc
    43621 ccagccgggt attgaaaaaa tatttcatgt tttacctgcg attcaggcga gataagaatg
    43681 agggttgggg aagacgattt ctttataaca gcggcagttc gggagctcgc cagcgtgacc
    43741 ggtcatgccg tcaagcgttg ggggtcgtcc ccattcgaca aacttccctt ccatctcccg
    43801 atgagaatgc cggacgtcgc catcttcggc tgtacgccag atataaccat tcgagccgat
    43861 tgacagcgct cgcgcctgat cgagcgcgcc ggttgcacgt ccaagttcgg tacgggcgat
    43921 aaggtcagcc ctggactttg ctatatcacc cgatgctgca atttctttag caaaatgctc
    43981 cgctctccca ccggtcacaa cagcttcaat cgcccgattc tggatgtcgt ataccctgtc
    44041 agcagcctcg aggggtagcg atttaatgta cttaacctgt tcggcaacga tggatttcat
    44101 cacctgccct ggcggggcat tgctcaccag attgcgtagt tcacgactga tggttttgct
    44161 gtgtttccgc cactgctcat cattcttgcg cacaatgtca gcggtaaagt tctcagcaac
    44221 cttcgtcgcc cacggcgtta taatttcgct gtagcgctcc agggcctcca tgatttcggt
    44281 gacgctatcg tttgaaccat cgtagtgccc atttacgata tccccgaccg cccgcgctat
    44341 ctgccgtagg ctcgttcgat atcggatctc cgcctgtcgg ctctggcggt ttgtcgacaa
    44401 gttcgccgat gcctggtggc gcttcgtctt cggcattctc gatatcctcg tcggtaatgg
    44461 atgcgccgat gccagtaaca tcggagttct cacgcaggtc ggtcatagcg gctttggttg
    44521 tcatcagacc tgcatccagc gcattgacaa tcgccgttgt ggtattcaca gccaccgttg
    44581 agcggtccac atctgacatc tgccatagcg ggttaaactc aaacgtgaaa tcgtccggca
    44641 gcggcttacc gagctccgaa cgatgcataa tgtccagcac ccggcgcact ggcaggcgta
    44701 agcgacgctc ctgcaatgaa ctgacccggt cataatagtt ggcaaggtct gcgtcacccg
    44761 ttgagaaacc tttaggggac tgcccgaaga ggcgcaccaa tggaatgcca acagcaccgc
    44821 taatctgctc ggcgaactgc gaaagaatgt catccagacc gctgaaactg tactggtggg
    44881 tttcgaaggt atccttggca tccattagcg tcatgccttc attgctctga aactggcgga
    44941 tcagatcaat gtttttcagc aacgcctcga atgccgggcc gcccagtgca ataagctcac
    45001 ggagtttttc cactttgtag gtccgcagat gcgctttgta gaccagctgc gccgcaccga
    45061 cagtggcgct gtcgaacgca gtaagccgat cccagatacg ctctacaacc gacattcccc
    45121 attcgttctc ggtcatcttc tgctggaatg gcagcgtcac cccatcgaag cgaatcaggc
    45181 ggctatggtg aatacgccag gcggggatgc ccgttgcggt ggtcaccaca tcataaagct
    45241 cgggcttgcc gagatttggc cccatctctt taatgcggcg cgtcagtacc gggttaatca
    45301 tccagcggtc gagcgggaga atacccttaa acttgccttc accaatggtt tcgagccgta
    45361 gcggggtcat gggcgcctga ccttctatca tgatgaagcc caccgcgccg ccgtagagac
    45421 gagaccattt cagtacgtcg ttcagcgcat cccagatttg caactgatcc agttgcgctt
    45481 cgagagtgcc acggtctttt gcgtcaatct cagaagtgat gcgaatgcct ttgcgggtca
    45541 tgtcgtcggg gatagcatct accgcttcac cgatgagcca ggatgagcga taggaccatt
    45601 ccaccagcat acggttgcgg ctggtgaagt tcgcccggta ggtcgatgcg gagtgctggt
    45661 taggcgtctg catccccacg cgggtgacaa agttctcgta gccgtcggcc gtggcctgca
    45721 ccgttcgtcg cgaggcttgt ttgtttcgtg ccatcaggcc tgtctcccca actgttccca
    45781 gatgtccagc gatgtgtcgg ttggcgcgaa agccataatg aaagcgtcgg cgacgtttgg
    45841 tgacggtata tcgcgttttg cgaggtcttt tttactttcg accatcaccc gtccgttacg
    45901 gtcgaaatcg cgatgaggcg ttgtcagttc cagtttcagc ttttcaagca acggacaacg
    45961 agaatctatg ctgatcagct catccacaag atactgttct ccgttgttaa tagcgttaaa
    46021 cgtatttctg aaacggtcag ccaccagcca ccacgcctgc gccttaagat ttgcgaaaaa
    46081 gtctttgttg gggatgccgt tgtattcgtc atctggctca tgcacacctg caccggcgtt
    46141 aaaccgctgg taattcacac gtcgcgcgta tgcgttctca cgcttccggt catcgttaat
    46201 ttccgagaac tttgcgcccg ccgacgcgcc aacaccgatt gagtcgtaaa cgatatctgc
    46261 atcgcgctcc attgcagcct ggtaagtgcg ctggcaactc ttcagcaact cgtcctcttt
    46321 ggccttccat tcatcggccc agtagataac tgagccataa cggtagacgt tggcgcactt
    46381 atccgcgcca ctgtcggcga catcgaaacc gatgcgctta cgtccttcag gaccgaaatc
    46441 cagaacctta tgcgcgtcaa cagccgcttc aatccacgaa agcttaataa ttgccgcatc
    46501 atcatcagac tctggtacgc cctcataaac atgcacaaac ccttccgggt cacgacgcct
    46561 tgccgcatcg ataaccttca gcatggtatc tgaaaggaat ggattctcgt cgtagttgat
    46621 tttgcgaatc agcgtatctt ctggcggatc gaccacaaag ttacgccaca cgaaatcggt
    46681 gaccagtcca gggttaaaaa taaaccaaca ctctgaaccc tctttacgga ttgtcggctc
    46741 cagtattttc cattgatatt ccgtcagtgc atgggcttct tccagccaca acacatcgat
    46801 cccctccagt gacttaattt cttcgatgtt gcgccataac ccataaaaaa caaattccga
    46861 gccggtaacc cggttaatga ttttgttgtt cagaatgcgg aaacgatgcc gcaggccaaa
    46921 ccggtctatc tgaattttga gaagcgtgta aaccgattct tcaattttgt tctggatctg
    46981 gcgagcgcag caaaaacgca ggctgtattt atttgccaag aatattgcaa atccggctgc
    47041 atcccatgat tttgacgatg accgcccgcc atagagcact ttatttcgcg cctgcgtggt
    47101 ccagaagttt ctcagggccg gattaagcgt cggtctggat atcggcgtag aagtcattca
    47161 ggtcacgttc tccgttacca tcatcaatac cagcatcacg tcgcagcctg tcagcctcga
    47221 gagatacctt atcagtagcc gccaaacgat aatcagtgtc ggcgtgtatt ttgctaacgg
    47281 tcgccagcgt tccaacgatg gattcaatgc gcacggtgtt acgcatcatc gccttttcgg
    47341 cagcgctgat gttatccatc agaattttgc gctgctgctc ttcctccgca tcctccagca
    47401 gggtgaacca gcgaccaatg ttctcggcgg ccatcaggtt attcgcccgc agccgaaaga
    47461 gctcatcttc aagcgtcagc gctctggcat cctcaacaac ttcatctttc agtagaaggc
    47521 gccgggcgta accgccatgt ttcagtgcat actgattacc aggctgaaaa ggaggatgat
    47581 tagtgacaac ctttttgcgt accgcttcgg gtttcgtatc tgcgggaggt ccggattctg
    47641 gccgcgaatg cttttgcact gcgccggagc tggcaggcct cctcgtggta cgcaccgtgt
    47701 ttttttgcgt accatttttg cgtacctgcg taatattttt gcgtacccac tccagcttct
    47761 ttgctttctt ccttatcgcc ccttccgtta cgccgtacag cgcccctatg tcgcgaaggc
    47821 tcataattcc ggcccggtat gccgtctcga tggcctccca gtccggtttt gccatgttgc
    47881 tgtcctatgg ttaaagccat taaaaaagcc acccgaaggt ggcatttgtg atggcaataa
    47941 aaaccgcccg gaggcggctt gttatcaatt acttaatagc tgttcgatat tagatgggat
    48001 cgggacacca ggctctactt ttagtttgtt tagcctttcg acaatagaca gtttctccgc
    48061 cccactcgct gcttggtagt agggtcttac cccttcaatg atatcattag ctgtaactga
    48121 agaaccaacg ccagcgcctg gctcgttttt attcaaagag ctgtgaataa tttgctcaat
    48181 agcctgattc atagttatta cccaaaatga gtggttacat accacaactt gtatatatgt
    48241 ccaccacagg cctttatcaa gcccacccgt agataggctt tgtaatggct acttcactgt
    48301 ttcgatggtc gagccgtgag agttcatcac gtaaacctgg tcgccaggat agatgaactg
    48361 gtaacggcag ccatcacccg cgccggggaa attttcactc ggatattcct caataatgat
    48421 ggcaatagca tcagtatcca gcacatcagt acggtcacta ataaccagtt cttcctcctg
    48481 cagcgctttg gtcatttctg gatcttcata gatagccggg agccagtatg cgaagtccgg
    48541 gcaggctgag ttatgagtaa gttttaaagt atctgcgaac gtttcagaac cggccctggc
    48601 tatcgagatg gatggctgct cacaaatatg cgtaacaccg ttgatgatgg ttttaactgt
    48661 aaacatagta tttccttctt cgtcttcttg ttacaacaaa aagccccgct agtgcggagc
    48721 tatgggattg ttggttgact ctctcaccga gttgtaaatg cgctcacacg tcattcctgc
    48781 gcggtagctt tcgtcagatc gctcagcata atattgagct tcttctgcaa ggcttccgaa
    48841 catgtcggcg agcactgtgg cgtcggctcc ggctgttttg cttctgacgg cagcggcaag
    48901 atttgcggtg tgctttgcgg cgtccaggcg ggtggcaagt ttttttgctt cggtacgcag
    48961 ctggctaaca gtggcagaca ggccagcagc agtggcagca gatttagcgg cttgcgcttg
    49021 tgcatctttc acagcctcat cacgggcaat aatgcggccc tgttcaataa tacgggcggc
    49081 ggtctgggcg ttgacttcct gagaggattc agcgctgtcg cgatctgccc atttttttgc
    49141 cagcccctgt cactccagac attaccggcg ataaacgcac cagccatcag caaaataaac
    49201 gccagctgca accagtatct tttcagaaga gcagataaca gattcatacc agcaccgatt
    49261 ttgctttctc aaagcgctct cgccgatcgc cgaagccgtt ctgccctccg ttgatgatct
    49321 gcgtaacacg taccaggtcg ccggaatatt tcagacaccc tttagtcaca aaaaaccacg
    49381 ctgcggatcg ggcggcatga cgttccagtt caagctgtcc cggattcgcc accagatcca
    49441 gtttcagggc aacgccacat ctggtgtaat tctccagccc ggtaatctgg ataagcccac
    49501 gcccgcgata cttccagcca tctccggcgt ctttgttacc catgcggcca ccgtaaacca
    49561 gattggctat ttgtggctgg tgggcaacct ggcgaccatc aatacgcccc agcatttcgc
    49621 actgatacgg cgtcaggcgt ttaccaaacg tcttcttcag cgcctccact gaataattga
    49681 agctttcctt cagaacagta aatcctgctg attcatgtcc cgcttgtgca ataaacatgg
    49741 cctgatccag tggcgcagtg ataccgaatt cgctcattgc cgccgtaata tacggatacc
    49801 agcgcgcaga aagcccggcg ctaataccag ccgcctgctg aaattgttgt tgattcatca
    49861 gtgcctcaga gcatcaacca gacgcgccac attaccgcga gcccacagca cagcggcgca
    49921 gataaggata ttcaccatca ccaccagcca gtgggatgat tcatataaac caaaaacaaa
    49981 ccggaaaggg acactggcat acaccagcac catgacatag gccagtaacg aaatcagggg
    50041 gcggtgtgtc gcatcaccgc gtcggtaaaa catcagaacg atgactatta ccccacaaat
    50101 tacggcattc agaactgcag aagggtcatt tgctaccatc tgatccccct cccctgatac
    50161 gagagagaat actgaacaga gtgttcagat cctgactgtt gagaaaagtg agaaacttta
    50221 tacacattgc agaaataatt actgcgccaa gtgcatccag tggtttttca taatgcgtta
    50281 ttgccgcaag cttagtacct atcagcccgg cgccaagcac tcccacaata aatgacgtga
    50341 taaaataagc gaccagcctg atgcgtccga tgttggttgc cgtggcgaca taaaataccg
    50401 agccggcaaa agcgccgaat accacaccat aatcggttcc ggttgccaga ccgaatacac
    50461 tggcccccat taatccacca gccaacactg tcgcactgga tacaggttcg gacattcatc
    50521 cccctctggt tgtgtgggtc ctctcagtta tgaggggaaa taataaatat cctccggcat
    50581 agccggagga tatttattca taaagaacac aattaagaat aataccgatt taattaaaat
    50641 aacttgatct cacagttgaa gaatgaataa tagcgagccc tgccaaggca gggcatagaa
    50701 ataaccaacg agaagaaata ggtaggaact aatgaaaaac accgctctgg gtaagttcat
    50761 ttttatcgtc ggcaccgcgt tactgctcgg tggctgtagt ggcatggtca tgcctcccta
    50821 tgccacccac ggtacatcgg tcggaatcat tgcgccggcg ggaggctata gcgagtggca
    50881 cacggatagc cgcaaccaca ccacaggaga cagtcacagc cagtcacagg gaaactgcac
    50941 ccaaagtgaa gatagccagc tcagcgaaaa tggtctcaca cggacacacc aaagcaactg
    51001 taacacccgt agtcaaaccc acagcagtag caccagcaaa acccgctcca gcagcgtcgg
    51061 tttcagcgtc ggggggcctg ttggtgctag catagggttg atcaagcaga tggagtcgat
    51121 gaaccgtgcg ccagccaacg atatgagtag taatgagatg ttcaagaatt tcggtttcta
    51181 gcacataacg ccacctggta ccgttgtggt gtctggcccg gcggctatct gtaacgactc
    51241 acaatcgaaa aaagtcagac tcgcaatcag cgcaaatttt ggctcacaat aactgcaact
    51301 gaaatcggac gtggactcac gctaagtgag agcgaaatcc gacgctcaga gccaaatgag
    51361 aagttttttc cattggcagt aattgtgagc cagcaaaaat agattgtgag tccattgaat
    51421 ggggatcgtt gtgcattttc ataagcctca cctccgatag ctcggatggc gcagtgtgaa
    51481 gtaggaaggc cgcccggtgg atcaacgaca aagctcagag ggattattcc ggacggcaca
    51541 aacagaaaag ccccggcaat caccgaggct taaattgttg ccggttaccg ctccggcgcg
    51601 atcagcaaaa gctatcgcgg tatcagattg tggtcctgcc cgtgtgagct ttgcggtcgg
    51661 ctggaacatg tagactccgc atcactcccc gcactttgtc ttattggcgt cgggaatcca
    51721 taaaagaaaa ccccgccgag gcgaggttct taattcttgt aacgtcacag gcgtaataac
    51781 ccatcgttgg aatcaggtta gccattttcc gttaattttg caatagctaa attattttgg
    51841 tcatcgagtc acgtttccca gaaccttttc tgcatacgac tcctcaatat ggcaatgctc
    51901 caccagtcga tcgaaaaaca gtttatagtt gtaccgccat accatttccg ttactcctag
    51961 tgctttaaaa atctcggtat ctttgagacg tgggtagcct cttcccttgc atcttgggca
    52021 ttttttataa accggcacgc cctgcaactc agattttttc ttatcgagaa tttctccgcg
    52081 tccccggcaa cgacattcat ttttcacctg gcctttgcca tcacacgcct tacacactac
    52141 gcgcacctgc tcacgaactg atttccacac ctcccagtcg gacggagaaa tacctttcgt
    52201 atcttttacc cattttggtg gcttaccatc cgggtaagta accttgttcg tgaaaacctc
    52261 agcatcaatt aatttagcac catgacagct actgcacgtc accaagctgg ccgcactgag
    52321 ggaataatcg cgaaatacat aacgcgccat agtgtcgaga aattttgagc gcttaccctt
    52381 ttccattttc cgtaatgccc catgccgttc tgcacgctgc tctgctaatt gcctgatgta
    52441 ggcgatgata ttttcagaag ataaaacccc ggcttttgcc agatacaatt caatacccac
    52501 tgcggctttt gcagtaagta gcccgagaga tgccattacg tcagtaatag tcagcgtatc
    52561 agacgttatt ccgcatggta ctgcgccggg catcatggat ttaggtgaaa aatatttcgg
    52621 taaggactca agattcattt cgatgctccc gttttgcttc aatgcggacg taattacgaa
    52681 gaatgcggta tgccacagga aaagatcccc ggtatcgata aattcggaga cgcaaccagc
    52741 gcatgcggag tatctcgatc agttctggtt tcatgcggcc tccagctttt ttagcgcacg
    52801 cagatccgac agtgccgcga gcctgatttc cttcagctcc tcgaccgtcc agcggtgcgg
    52861 ggtgttattg ttctcgagtg ccagcaccgc cgcctcaccg taacgctcaa ccagcgcggc
    52921 acgatatgct tcgatgttcc ctgatttgta gacgttgcag acatcacact gaagatggat
    52981 gttgaagcga gtgaagcgca gatgcccggc ggcggccgta ctcctgtaat ggcctgcatg
    53041 ccatgcgaat gccgtcttcg ttccacagga gatgcaaccg agtccttctg ccagttcggt
    53101 ttcgcggcaa atgtcattta cggcgcgctg cgtcaagtca atccagtgtt tcagcggctt
    53161 aaccgcggct ttccgctggc gccaggcggc gcgttctttt ttctcagcgg cgcgctgaag
    53221 ggattgcgcc ttacgttgcg cggcttcgcg agcttttctg gtctgttctt tgccgacggt
    53281 gctggcgcac tggtacgagc aaacgatctg cccctctcgt atcgggtgaa accactggcg
    53341 gcattctttg tttgcgcact tacggcgcgg taatttagcc atgttcaccc ccagaccttt
    53401 tggcgtaagg attttggcgt ccgcacccgg tgtgcatatt ctggtaattt cgcgctgaca
    53461 gtccaggtaa tgaagtcagg gttcaggctc ttttctgtcc ttacgccccg cttctgataa
    53521 tccgatatca gcgtgtcggc ctgctcggtt gtgcagtcgt gatgatggaa ccaggagtat
    53581 ttcatcgcca tcaccccgca aagctcatga gctgggcggc ggcgttctcc gcctcgcgct
    53641 gagtacgaaa tgtacgtgat aaaatccacc gccagagcac atcaagcgcg gatttataca
    53701 actgctgaaa ttcgacctca tccatgctgg aaaaagcgat gctgcgggga tgtttgcgaa
    53761 gggtgccgtc cggtaactgg atggcgtcat agtgaccagc ctcaaccgtc acccatgcgc
    53821 ggtatgcatc gaaagattta cagaggctaa ttccgtttgt tacccggcgg tttgcaatct
    53881 gttccagata ctgttcagcc gcatccagta atgcgctttc attcccgcca tatgcagcga
    53941 gaaactttgc ataaccgttt accagtttgc gctcattggc agaaatggcg ccgccggtgg
    54001 gttcccagta ttcaaaccca agattaagca acgcgaaaaa gcggcgatgg aatgcaggat
    54061 tcctcacctg acggaactca gccaccagca cggcgccgag tttgattttt gattgcagaa
    54121 tatcactggt ctccggcgtt gcggggatca gaattccaga tgactgcttg atgagttgta
    54181 attcgtgcgc catggcgttc tccgtggcgc agcaggtgca ggttgttcag gcctacattt
    54241 gaagtgtatc aaagcaacgg gtaattcgat agcctgcctt ttctaacatt tgcgtaaata
    54301 atgttggagt tccaactatg tcatcagggt gaaggggaac aaaagatatc tcgtcaccac
    54361 gacgatacat cagggcgcgt ccgctatccg gaatactacc gaaccttgcc actacacaat
    54421 gatcgtaaca acgtataacc gcataccctg attctggtaa gtcttctaac atgtaacccc
    54481 ccgtcacact gactttattt ctggaaacgt ctgcgactcc acgatgctta atatgcataa
    54541 aaccagtcgt cagcgctttc ccacgtttcc tgcagaatgc tctgtatacg ttttttatcg
    54601 ccatcagcag caccgacgat actcagacca tcctgactgc ctcgacggat ggttaagttg
    54661 cagttttcat actgattctg gagacgggta attaattctt tttcaagtgc aggcacggca
    54721 ccttccggaa gctgttttgt ccggctgata acaagttcaa ttctcataat tccctctaca
    54781 tttaactact gtatataaac acagtatacc tgttagaaag aatattcaag aggtgaatag
    54841 cactttttgc aaaagccatg ccattgtata ggaagagttt ttcctagtat tcggaattta
    54901 ctaaatcagt taggcaaagg ctgaaagcga aaaaaaaccc gccgtagcgg gttattcatt
    54961 cgatttgatt cggatgtaac gtgaggtcgc cacgagagcc tgaatcatat taccgccagt
    55021 ttcgcataac gttctggaat catactcgcg tgaccagtgg cataaccaat tttccaggtc
    55081 atccactgcg taatctttac gagccaaacc ctctgcgatg gttacaactt catcactagg
    55141 tgctgtaagc tcatatccgt tcagcaacag gaatacgtaa cctgccatca tagcggtgcg
    55201 tttgtttgcg tttgcgaatg gatgattctg gattaggctt tcaattagaa cagcagacag
    55261 acgaaacata tcgtctgtct gctcataata tcgaatggtg cttggccggg actgggaaga
    55321 actgaggttg ttcggattca gtacgcctat cggttcattt ggcgtctgaa tctcgatcag
    55381 agacctgttg atgtaaacga tatcttcaat ggaaagataa ttgactcctt caacatactc
    55441 tatcgccatc cgtttttact cagacctttg aaagttcttc catcgccttc tcgtaacgag
    55501 caaacccaaa ctcaaaggcg tttttaactt gaccagtatg tgaacatgct ttgctgatcg
    55561 ctgcacgagg tttcgccacc atggatttgt cacgaggcgg aatgtacaag cgatctgcct
    55621 tttttaatgc gtgacccatg attatcaccc tcatgcacgt ttggcagtgc tttctcaaat
    55681 tgtaggatgt aaacacatcc aaagaattta tgatcacttt aagtggttga ggacaattta
    55741 ataccattcg tcatatttga gcaatgggcc tgcgtctgaa gatagaagca tgttcgacga
    55801 aaatctcaat ggccactttg caagttaacg acattttcgc agaagttacc cctcaggtaa
    55861 tagtaaacta ttgtcacgat ctcaggagat aggctggtcc tgtgagtcga ttaaagtgga
    55921 cacaaagcca ataaatagca ctttttgcac aaaaatcata tcctggttgg aatgcacaac
    55981 gcccaacatt gctgtagtat ttcgccccct ctgaatgtag cgctcagatt ttaatcgacc
    56041 caatcccgcc ctgcttcaac atcaagcccc gcatatgcga ggcttgttgg gctaacccgc
    56101 cgcagcgggt tatgacgcaa cacttcatgc cggagttttc cgatccgtct tgttgtgaac
    56161 ctcccagaga ctaatgccgc aactgaacac aaactcagcc agataattta aaccggacca
    56221 ttcccggatg ccgccgcgcg ccgcttccac aaatacagcg atatcctgat cacgccacac
    56281 tccaaacagg cgccagccgc cactgtcagt cttaacggct gctatacgcg tcagaacacc
    56341 agtctggtac aggtcagtga acgcaggttt cttcctggtt attattcgca tatctacaaa
    56401 cctaagaaat gttgattaca aatcactgat tcgtattttt tgattttgca ctaatgccga
    56461 tcacaggacc ggcatatagg tgtttcacga tttacctccg ttgagcatgg cagcgcgaca
    56521 agcgttccag atttcttgcg catcgtcgtc gttgaaaagc gcatcagaat gtgaagccat
    56581 caggtcgcgt atttcttccg gacattcttc cggcactacc ggcactggct gctctttgat
    56641 atgcagtcgt ggctcgccgt ctttcggttc aggccattcg cgcttcttgt tcaccgccag
    56701 cttttccacc atcgccaggg caatctgctc gtcagtaata ccagcgcggc gttgtgcatc
    56761 ccataacagg aattgcatat cagcccattc gctcaggtcg ccaagttctg cggcagtttc
    56821 caatgcttct tttgagaggt gcttcagtgg accgatgggg ccaacatcgc cgaatgtggc
    56881 atcagaccag tcagcatgtt catggcgaac ttgttctcgt tccagcgatg ccagcgcacg
    56941 cttcagcaca ataagaattt tggcgtcgtc atcgctcagg ccaaacggaa tatcatcgcg
    57001 agtgttttca aattcagcga tggtttgctg tagccattct ttggtaatag tggtcatggg
    57061 ttagtccttc acaaaaataa tccagtgggt tttatcgttc ttgccggtgc gctggccaat
    57121 aattggtttc acgtcagtaa gcgccaaaat ctggctaacc ggaatctgcg tttcgttcca
    57181 tttgaaaatg agaacgccgt gtgccctcag cacccgaaac gcctctttga atccggcgcg
    57241 gaggtcagaa cgccatgttt ttttgttgag tctcccgtac tttttgccca tccaggccgt
    57301 ttggccgaca cgttccaggt gaggcggatc aaacaccacg accggaaacg acgcatcagc
    57361 gaacggtagc gcacgaaaat cagcaatgag gtcaggactg atgactaggc ggcgaccgtc
    57421 gcacaatata tgctcctcgg cgcggatatc ggcgaatacg gcgcgttcat cgcgcttatt
    57481 aaaccaaaac atgcgcgagc cgcagcacat atccagaata gattgcgatt ccatcacgac
    57541 tccttaacct tgatgccagc ggtgcgtatt tcgtgtatcg cattatcatt accagcacac
    57601 caaccctcgg cataatcccg gctgaatccg gtcatgtgca tgacttctcc aacgctgagt
    57661 tttgacaggt tgaccttccg cgcctccagt tctgccaccc ggcgagcctc acgggttgca
    57721 attcccgcgt attcaatcag gcgttggtcc agttcggcta tgaggcgttc tgctgtatcc
    57781 aaatcctcgc ctaacttctg cgccatccga aaccaattgg cgcgctgttc ctctttggtt
    57841 tccagctcat ccagcagcgc cagcatggtg gcggggttgg ctgcggcgat aaattccgcg
    57901 tcacgtttct caacagtatg ggccaacgtc acttcttcac cgcaaagaga aaatggcgtt
    57961 accgtgatgc cattgaacag tgatgaggtg cggcgccaat tccccggcgt agccctctca
    58021 gccacttcac gaagcgcccg tttgtcgatg ttgctcattg ggctcccccc ttgttgatgc
    58081 tcattttgga tgctccataa acctgcatta ccgggctttt ctccagcacc ggcagcgctg
    58141 aaaatcccgt tacctgacta ctgctgtatc gcctgaggtc ataatcaatc accgcacgct
    58201 ggtctcggaa aatgccgcag cggccatgac gaatgaagcc gcctcgctcc agcgcgatac
    58261 gcagatattt ctccgccgtg gttcggtgca cgccaaaaat cgcaacgacg tcgttcgtcg
    58321 tgatgcgccc ctgctctttc accagaccga taatccgctc aagaataatc atccgttcgc
    58381 tgtgtgtttt aggtcgggcc atttttaacc ccttatttca caatccggag gtggctaacg
    58441 tttttccggt agctttccca gtcaaaattc acccacatcc ctccgtccat ctggaggcga
    58501 tcgataaccc tcgcgcccag tgaatccaac agcccctcgt ggttaagatt cgtcagaacg
    58561 ccaacaggtc gcatcgatga gagacggcga tcgataacct gattgagaat gaccttctca
    58621 ccactgctcc cgcgctgaat accgacttca tccagtacca gcaggtcaac tttgcaaagg
    58681 tcatcaagca gggacgcttc tgattgccca ccgtcgtagc actcacgaac cctgagcatc
    58741 aggtcaggaa tggttaccac cagaacgcta tgaccgccgg ccagcagatg atttccgatt
    58801 gccgccgcaa gatggttttt cccggttccc ggaccaccgc tgaacacaaa gctcgcaaat
    58861 ccactaccga agttctgggc ataacttttt gccatcgtgt acgcttttcg ctgcccctcc
    58921 ccgcttactt cgtagttagc aaacgtacag ctacgatgga gatcctgaat gccagatcgc
    58981 ccgaaaatct tctcggtgcg ggatttctga ttcatcctgt caagctcttc actgcgttta
    59041 cgcccttcgg cttcctgcca tgcccgccac tcatcagcag tcgagaattt cggctgcaca
    59101 ctggctggga taattctttt caggcgatca agcgcactgc cagtaccgat tacgtttttc
    59161 atcgttaccc cctgaatccg gtaggaatgg ttttgtctgg cgcagaaatg tggttcacat
    59221 ctctgccagc tcttcggtcg ttgagagcga acttcggttt gaatagtccc tggtagccgt
    59281 tggcaatgct tgtgttgatg acgtttaccg gatcgtggcc ttcatccagg cactccttca
    59341 gaagcctgaa agcttttgtt accgtcagtt cggtttttat gggctttccg gattgctggc
    59401 ggtatgtgac ccattcgttc cacgacgcag cattcagcca ttcgggaaca ggaatactca
    59461 acggatcaaa cttcactttt cccttagggg gattaaaggg ggttagatct tttatatttg
    59521 tctttggaat aatgtctttg gtgttccctg ttttcgggga tgcccttccc tcttttcggg
    59581 gataactatc cccgttttca gggatggctg aatggggtaa aacgctatcc ctgttttcag
    59641 ggataactat ccccgttttc ggggatgccc ttcccccttt tcgggtataa ctatccctgg
    59701 tttcgggtac agaaataatc catgtggcaa tttcatcatc aggaaaagac accggacatt
    59761 ttgagcaatg tggcttggaa taagcccatt tatccaggtt tgtattaatc cctatgtatc
    59821 ttgtttgacc aatacggcgc aggataatga tgttacgata ggcaagactc agcaccgctt
    59881 cggatacatg ctttaccttc agtgttgtct tatctgcaat gaggctgttg gcaatacgat
    59941 ctgatttttt cgaccagcca taagtcagcc ggataatcgc attcaaaaca cggaactcac
    60001 gccccgatag ttcaacgata cacaaggcgt cctggatctg attagctaaa cgtaaatagc
    60061 cattttccag atcagccata cggcactcct gttgcgtcgg tatcggcgca gggaatttgt
    60121 atatttcagc ggtatttgac atactcatct ccgcaattac ctaccgtttt tgcaccagaa
    60181 agccgttggt gacccctcac cgcggctttc gcctttttgg ttgctgtcat tttcagtccc
    60241 accccagcgc atccggcctg gctcgttcag cctttagccc ggcatcagcg agaatctcta
    60301 cggctgtgag atagtttctg gataccagta ccgcttccgg tggcgcggcc tgaatcccaa
    60361 gaaaagccag ctctttcgcc atgttgcaga aatatccctc agctttacgc ctgctgactg
    60421 tcgactcgct gatgcccata tgctcggcgt atgatttctg ccctactgat gcaagccggt
    60481 tgagcaggac actctctatc tcaatcgggt tgatttctgg tgggtctaac tttcgtgcaa
    60541 ttgcgttctc catgggtaaa tatcctctat ggttatttgg ctgatgcctc ttggcttggt
    60601 aagccatcgg ttgggtttgg gtagagatca ggacgcagtt cgtgtggggt gactttccag
    60661 tcaatagctc ttgccactcg aactacaagt tcgccgggaa ctttgttttt aaaccagccg
    60721 ttaacggtct gagcacggcg accaagtcgg cgtcccaacc cagcctggct acacacggaa
    60781 aggatcttgc gttgaacagt tactttcatt ggtcggtctc attgagtgaa gatacaacca
    60841 attattcaaa tttaatcgat actgtcaaat tatttcgata gacataccta cagaaaaaat
    60901 ctgtataatg aaaccatgta attgtgcgag aacgaaaaat gaactttgga gagcgtttac
    60961 aaagagtgct taatgagact gggatcaccc aatctgagtt aggtcgtaga gtcggcgcta
    61021 cctctcaatc agttaatggt tggtgtcagt ccggcattct tccccgaaaa gatatcttag
    61081 agttgttacc taaggccacg ggtaagccgt tgtattggtt cttcatggag gatgatgatg
    61141 aatcggatgt gcctgaacgt ctaacacaag gtggtccaac agatctcaat gaccgacaaa
    61201 agcggctctt agaaatattt gatcagctac cgactgttga acaagaccgt tttattgagc
    61261 tggcaggcac cagacttcaa gaactagacg atttcatggc tgaataccaa agacgcagaa
    61321 aaatcgagcc tccttctcgc taaaccagct ttaaaactac taaccgcctt aactggcggt
    61381 ttttttatgt cattaattca cccacatctc gctttcttaa tcttccctgt aaaattaatc
    61441 atcaaattta attgacatgt atcgattgaa tcgataatac ttaacctatc aaccgcagca
    61501 acgagtcatc aaggcaggac gcccacgaag tagccgcccg gggcatacga agaccgggat
    61561 gagatggcaa ggttaacgcg cagcaggtga taaacgttcc gctggccggc gataaggcaa
    61621 acgagggtga gatgactaat tacggcacaa caacattacc aagaaccagc gttgtaccgg
    61681 gaatgctggt taagtaccag gggcgcacat accgcgcatc tgcaaacgta ggaaaagggt
    61741 tgtacttgtt tacccttttc gaacgcctgc ggacaaccaa cgacgagatc gaggtttacc
    61801 tcaaccaaca cggcaaacct gcaacccatt agcaggaaaa accagcaaaa cgaaatactg
    61861 cacagattct ggcagaccac atggtgtcgg ggattctgca aaccaaattc aggagttcag
    61921 ccatgaacgc atatctcact tacgaccgga tcgaggctca ggactggacc cggcattacc
    61981 agcaaatcgc cagagaagag aaagagtcag aacttgctga cgatctggag aaaggactgt
    62041 cgcttcacat gctggagtcg ctgtgtatgg acgagctacc acgccacggc gccaacaaaa
    62101 aagcgatcag ccgggcattt gatgacgatg tcgaattcca ggagcgcgcg tcggagtttg
    62161 tgcggtacat ggccgagacg ttttcccggc atcaaattga tattgaatca gaggaataag
    62221 acaaatgagc acagcactcg caacactggc aggaaaactg gctgaacgtg taggaatgga
    62281 ttctgtagat ccgcaggaac tgatcactac attgcgccag acagcgttta aaggtgatgc
    62341 cagtgatgcg cagtttattg cgttactgat agtcgccaac cagtacggtc ttaatccgtg
    62401 gacgaaagaa atttacgcct ttcctgataa gcagaacggg atcgtccctg tggtgggcgt
    62461 tgatggctgg tcccgtatca tcaacgaaaa ccagcagttt gacggtatgg attttgagca
    62521 ggataacgaa tcatgtacat gcaggattta ccgtaaggac cgtaaccatc cgatctgcgt
    62581 taccgaatgg atggatgaat gtcgccggga accattcaaa acccgtgatg gtcgtgagat
    62641 tactggaccg tggcagtcac atcccaaacg gatgttgcga cacaaagcaa tgatccagtg
    62701 cgcccgtctt gccttcggtt tcgcaggtat ctacgacaag gatgaggccg aacgcattgt
    62761 cgaaaatacc acgtatacca cagatcgcca gccggaacgc gacatcactc cggttagcga
    62821 tgaaaccatg cgggaaatta atgatctgct gatcaccctg aataaaacat gggatgacga
    62881 tctgctgccg ctctgctccc aaatcttccg tcgcgatatt ggtgcatcgt cagatcttac
    62941 gcaaatcgaa gcagtgaaag ccctcggatt cctgaagcag aaagcagcag aacagaaggt
    63001 ggaagcatga caccagaaat tatcctggct cgtacaggta ttgacgttag caacatcgag
    63061 caaggtgatg acgcgtggca ccgtctacgc ctcggtgtca tcactgcttc cgaagttcac
    63121 aacgtcattt ccaggccaaa gtcgggcaag aagtggactg atatgaagat gtcctacttt
    63181 ctcacccttc ttgccgaagt ttgcaccggc gtggcaccgg aagttaacgc cagggcgctg
    63241 gcctggggga aacagtatga agatgatgcc cgcaccctgt ttgagttcac cactgacgtg
    63301 aaagtcaccg ggtcgccgat ccttttccgt gacgaggaca tgcgtaccgc ctgttctcct
    63361 gacggcctgt gcagtgatgg ccgcggtctt gagttgaaat gccctttcac ctctcgcgac
    63421 tttatgaaat tcaggcttgg cggcttcgag gctatcaaat ccgcctatat ggcccaggtg
    63481 caattcagca tgtgggtaac cgggatagat gcctggtatt tcgcgaatta tgacccgcgc
    63541 atgaagcgag aaggcattca ccacgtggtt gttgagcgcg acgacaaata catgtccctc
    63601 ttcaatgaaa tggtaccgga atttatcgaa aagatggacg aagcgctaaa ggagattggc
    63661 ttcacgttcg gggagcagtg gcgatgacgc acgcacagga cgaaatcagg gttggcgcga
    63721 tgcgccatcc catgttgaag aattaaatgt tagaggacgg aagtatgagc aaaattggtg
    63781 actatttctt tgaattcccg gcatcaagag gcttacaggg aaatacggtt gtgttgatga
    63841 tgacagtccc agcgcgcgcg ctaactcgcg ttctggcatc agataaccac ggcaatacgc
    63901 ttgagcgttc tcagcgagaa ctcaatccag cgcgtgcgaa gaagttttat gaatacctgc
    63961 gaacagctta cgagaaaaaa gagccgttca tcatcccgcc gctggttgga aactgcgact
    64021 cattcattga gttcgaagag tttggcaata cgaatgtggg tgtcgcgcga ttcccaatgg
    64081 atgcggaaat taaactgttt gacggtcagc atcgcgccgc aggcattgca gagttctgcc
    64141 gcacttacgg agagcctatt cacatcccaa tgatgctgac acaccaactg ccgctcaaaa
    64201 cgcgccagca gttcttttcc gacatcaaca acaacgtatc gaagccatca gcggccatca
    64261 atatggccta taacggtagg gataaaattg ctcaggatat ggtttcgttt ttgtcatccc
    64321 atgccatgtt ctcagaaata acagactttg aacacaacgt ggttccggcg aaaagcgatc
    64381 tctggattag cttcaaaccc ctgagtgatg caactgcaaa attctctggt aatggggatg
    64441 agcttgctac tagtgacatc tatgacattt gggaggcatg gctcaagcta acagccatca
    64501 agggaattag gcatggttgt acgcctgttg aatataagcg ggattacatc cagttccacg
    64561 cggtgatgat caatgcgttt ggctacgcaa tgcaggaact actacggcat cgccctgcac
    64621 acatcattgt tcagatgatt gaggagttag taaataattc cactatgagt gagctggaga
    64681 atttcttcct catttcatcc tggtccggtg tctgcgccag cactgaaaaa gatagagcga
    64741 cagttattgc cagcgttgct tcacaaaaag ctgcttcggt gagactaatc caagctatta
    64801 cgacaaagag ctttgaggtc gcagcatgag atacggctct gtttgcagtg gaactgcggc
    64861 gatgcccata gaggaaccgg cgctgcgcac ctggcgccgc ccgttcctga aatgggcagg
    64921 cggtaaatat tcgctgctgc cggaactgga tcgtcttatc ccggcaggta aacgactgat
    64981 agagccattt gtgggcggcg gatcggtgtt tcttaactca gacaagcacg aacgcttcct
    65041 tctggctgac gtcaacgctg acctgattaa cctgtaccag atgctggccg tagtgcctga
    65101 ttcggtaatc gcagaggcta tgaaagcttt cagacatctg aatgatgccg aaaactacac
    65161 agtaattcgt gaagcattca acgcccagaa actgaatgcg acagaacgag cggccgcatt
    65221 cctttacctc aacaggcact gctttaacgg tctgatgcgt tacaaccttg acggtttttt
    65281 caatgttgga tggggaaagt ataaagcccc atatttcccg gaagaagaga tcagggcatt
    65341 caggcagaag tctcacgcgt gcgtatttat gactgcgggt ttcgaacgta ctctcaggct
    65401 ggcgggtgat ggtgatgtcg tttactgcga tccgccatac gagccaatgc ccggcaccgc
    65461 tggcttcact aactacgcct ccggtgggtt ctcatgggat agccaggtag cgcttgctga
    65521 aagctgtgtg gcagcccatc agcgtggcgc aaaggtgttt atcagtaatt ctaccgcacc
    65581 acgcgttatt gaactttacg agaggcacgg cttcactctg caccgggtca atgcccgcag
    65641 atcaatatcg agtaaaggca gtacccgaga aacagcgaac gatatcgtcg cctcactggg
    65701 gatttagtga tgatgaaact tattaacaga agtaagcaat caccagtcgg tcgtcgcgca
    65761 tgtgatattg cactggctgc gcatcatgag aagttcggcg attacggcag acaaaagcac
    65821 gttaccaatt acaccgttgt agtggatggc gtaaaggttc ctgtcgaagt agttaaccgg
    65881 gccaccagct acgtagccac cgcaatgatc ggcgtccgga aacttagaaa tctgccagca
    65941 caggcaaact gaatattagc gatggcccgc tgcggggcca ctggagaaaa cgatgagcaa
    66001 cattatccaa ctgacgccaa acaagtgggt tagcgaaaaa gttctgattg cggttaccgg
    66061 gcttaagccc ggaaccatta cccgcgccag aaaagaatcc tggatgctgg gccgcgagta
    66121 cctgcacatt tcaccagacg gaaatccgaa gccttcgagc gaatgcatat acaacagaga
    66181 agccgttgat cagtggatcg aggcgcagaa aaaaaatcaa ccaggtgcga agacaacatg
    66241 aaaagcagta cactcgtcaa tgctcctgga cgtcaggagg gattaatggc taatgcatca
    66301 tacccgacag gcgtcgaaaa ccacggcggt tcgctccgca tctggtttct gtataaaggt
    66361 aaacgtgtca gggaaaacct tggtatccct gacactgcaa aaaatcgcaa gatagctggc
    66421 gaactgcgtt cttcggtttg ttttgcgata aggatgggga attttaacta tgtggaaaaa
    66481 ttcccaaact caacgaacct tgcccggttc ggtcaggata gaaaggaaat tactgtgctg
    66541 gagcttaccg aaagatggtc cgagctgaag agaatggaga tcagctctaa taccatgagt
    66601 aggtacgaat ctatcataaa aaacatgctt ccactcatcg gcgaaaacaa aatggtttct
    66661 gcggtgacta ctgaggattt gctgtatgtc aggaaggagt tgctgacggg ctttcaggta
    66721 atgaagaagg atcaccggac tcaggttaaa ggccggaaat cgtccacagt gaataattac
    66781 atgatgctga tggccgagat cttccagttt ggaacagata acggctatgc aaaggaaaac
    66841 ccgtttagcg gaattaaccg tctcaagaaa gcgaaagggg aaccagatcc actcacgaca
    66901 gacgagttca tcaggtttat ccaggcatgc ggccaccagc agatgagaaa tctctggtca
    66961 ctggcagtct ataccggaat gaggcatggg gagttgtgcg gtctggcctg ggaagatatc
    67021 gatctgcatg ccgggacgat cattgtgaag cgcaacctta cccagacgga tgagttcacc
    67081 ctgccaaaaa ccgacgcagg tactgacagg gtgatatatc tcattcaacc agctattgat
    67141 gccctgagga atcaggccca gttgacacgc cttggccggc agtttgaggt tgaagtgaag
    67201 ttgcgggaat atggacaatc tgtcattcag ccctgcacgt tcgtattcag ccctcaatgc
    67261 gtcaaacgtg gacctcgcac aggatatcac tacgcggtta attccattaa taaaatttgg
    67321 gccccgataa tcaagcgtgc cggcattcgt taccgtaacg cgtatcagtc acgacatacc
    67381 tatgcatgct ggtcattatc agctggtgct aacccaaact ttatagcaac gcagatgggg
    67441 cataccgatg cacagatggt ttacaaggtg tatggaaagt ggatgtcaga gaagagcgca
    67501 gaacaggttt ctctgctcaa ccaggcactt tcccgctatg ccccatcact gccccaaagc
    67561 atggtagcag cgcagtagaa atccttaaat tcaaggggtt agcagtcgca tcgctacatt
    67621 tttataacat ggggcacgaa atgcgctcga ccctaaagac agcttatggt gtgatcgggg
    67681 ttcaataaat cgctaaacaa ggtatactcc agcggttttc ttagttgttt attgtactaa
    67741 acactcccgt gagaggacgc aacagcgcac ctatgacaca attcgcttct cctgttctgc
    67801 actcgttgct ggatacagat gcttataagt tgcatatgca gcaagccgtt tttcaccact
    67861 actatgatgt gcaggtagcg gctgagtttc gttgccgtgg cgacgacctg ctgggtattt
    67921 atgccgatgc tattcgcgag caggtggacg cgatgcagca cctgcgcctc caggaggacg
    67981 agttccagtg gctctccggc ctgccctttt ttaaaccgga ttatctgaac tggttacgcg
    68041 agtttcgcta taacccagct caagtctgtg tcaccaacga taacggcaag ctgaatattc
    68101 gcttaaccgg ctcgtggcgt gaagtcatta tgtgggaagt gccgctgctg gccgtgatca
    68161 gtgagctggt tcatcactac cgctcgccaa acgcgggcgt tgatcaggcg ctcgacgcgc
    68221 tggaaagtaa gctggttgat ttcactgcgt taaccgccaa tctcgatatg tcccgcttcc
    68281 acctgatgga cttcggcacc cgccgccgtt tctctcgtga agtgcagcag gcgatagtta
    68341 aacgtctcca gcaggagtca tggttcgtcg gcaccagcaa ctatgatctc gcgcgtcgcc
    68401 tggcgctgac gccgatgggc actcaggcgc acgaatggtt ccaggcgcat caacaaatca
    68461 atccggacct ggcgaccagt cagcgtgccg cgttggccgc ctggcttaac gaatatccgg
    68521 accagcttgg tatcgcattg acagattgca ttacaatgga tgcgttttta cgcgatttcg
    68581 gcattgaatt cgccagccgt tatcaggggt tacgccacga ctcaggagac cctgtcgcat
    68641 ggggcgaaaa ggcgattgcc cattatgaaa agctggggat tgatccgctg acaaaaacgc
    68701 tggtcttttc agataacctt gatctgccaa aggcggtcga gctctatcgc catttcgcct
    68761 ctcgcgtgca gttaagcttc ggcatcggta cccgactgac ctgcgatatc cctcaggtaa
    68821 aaccgctcaa tatcgtgatt aagctcgtgg aatgtaacgg aaagccggtg gctaaacttt
    68881 ccgacagccc cggtaaaacg atctgtcatg ataaagcgtt tgtgcgcgcg ctgcgtaaag
    68941 cgttcgatct cccgcaggtg cgtaaagcaa gttaaccatg cctgtgcgaa gcgcccggaa
    69001 agtgggcgct ttgttactct tctgaccatc ttacctgttc tggccgcgat ggtgactatt
    69061 cttccccttc actcttcgac atatttacgt gcgtgatttg cgttgttttt tcagaattag
    69121 tgtcccgctg tgtacgcgtt ctgaataaat tgaattcgct aataaattct ttacgcagca
    69181 agaacagagc aattacgttg gggataacca gaaaaccgac agcaatatca gccattaacc
    69241 agattaccgg gatttccata ttaacggcaa tcagtggcgg caaaaaatat agccatttaa
    69301 tgatgcgttc tagcttatcg ccaaagatat agtttattga agtgcgaaat ttaatatatg
    69361 aaccaagata agaagtaaac agaatcaacg ccacaccgag acagagaacc tgaacaataa
    69421 tcggatgcca tgtttctttt aaggcggcaa agataatctg aataccttga taactggcgt
    69481 ctgtccacat accagaagca agtacagcaa atgcggtaaa gttacaggta atcattgaaa
    69541 caaaaaatac ttccactgcc ccccacattc cctgacggaa agcataatcc acgttggcag
    69601 tagcatgtac tgtggccgag gtacccatgc cggcttcgtt agtgaatatt ccgcgactgg
    69661 ctcctttact gatggccatc atgatggttg acccgacaaa gccaccggct gctggcgcag
    69721 gggcaaaggc ataatagaaa atacttttta taacctgtgg gatagcctcg atattcaata
    69781 ccactacacc agcggcacca atgaaatagg caatggtgat cggtggaagt gcaatcgtac
    69841 agaatttacc aagactggcg agtcctttta aaataaccaa cgcgcctacg atgacaataa
    69901 atcccccaat gacgcttgtt gggatgtcaa acgtatagtg aatgaccgcc gccatcgtat
    69961 tagtttgcac aaaacaggca tccgtaataa ccagaatcat taatgcaaac gcatataatc
    70021 ctgccagggg ataccatttt ttattgagct ctttcttaat ataatgcatt gggccgccat
    70081 aatattcgcc attctcacct ttacttcggt atttcaccgc cagcgtcact tcaaccattt
    70141 tggtcatcat acccacgacc gcaatgatcc acatccagaa aattgcccca ggtccgccaa
    70201 ccgcaatagc cgcagcaaca cctgcgatcg ttcccgcgcc taatgagccg gatagcacag
    70261 tggcagccac ctctattgat tttaaggatt ttttagacgc tgcctcgcca gtagtgtttt
    70321 gtttattttt tccggcaagt gtaccaattg tattacggta aatttctttt aaattgataa
    70381 tctggaaaaa tttgaggcgt actgtaaaat aaaagccaat gccgatgaca cacaaaaata
    70441 atgggccacc ccatagaaat tcaaagagtt gtgaaagttg ctctaacata atgacctcgg
    70501 atttaaatta attcgttcag tctcagaaat aatctttcca gttcagcgta atcctgaatt
    70561 ttgccaacaa cactaaactg gaaagtcagc gggtaggagc atcccttact cactaaatgc
    70621 cgttttaatg gtatattgtt atgaagtttt gcttcctgca ttaggtttat tatgcgtata
    70681 aaaaacgcgt tttttacatg ctgcctttat tatctaattt tttagtcgta atgtttaagc
    70741 actgcgtccg ttccagacta tatcttcata aatatctggg gacgtatcgc cttcggtgct
    70801 aataagcaga acatgagcat tggcatcaag ctgtaagcga ttagcaagat cctgataatg
    70861 catattgttc atcaactcat aaagtaaccc tacgccaata gctccggact cgccggaaat
    70921 aaaaggcgta tcagtgcctg gacgcggcgc ggcagcaatg cgcataccct tagccgccag
    70981 acaatcatca gcggaaataa aacaactggt gttgtcccga ataataggcc aactgataat
    71041 attcggctcc ccacacgcaa gcccggccat tatcgtcgcc atatcgccag tgacgcagtg
    71101 aggttgacca tcattcataa ctgcggattg ataaagacag ttggcctgat gcggctcaac
    71161 cacaataata ttaggggtat tttcctgcat tttttcaaca aaataaccca taacactgcc
    71221 agcaaatgat cccacccccc gcttgtaaaa taaggtgggt tggcaacgga ctgtttgttt
    71281 ctgcgagctg ctcataagct tcaaccgcta gtatcatata gccttgcata atccatgttg
    71341 ggatctcttc ataccctgtc caggctgtat cctgcaaaag cacccagcct tttgtttgcg
    71401 ccattctatg ggccagtcgc actgcatcat cgtagttcag atcggtgatg gtgcattcag
    71461 ctccatgatg gcgaatattc tctgcccaga ttaacgatga tcccttaggc atataaacga
    71521 cggcttttag acctaattgc tccgccgccc acgccacacc acggccatga ttgccatccg
    71581 tcgcggtaac aaaaacacaa tctttaattt tttctttaat ctcaggagtg ttaagggcag
    71641 caaaacttaa cgagttaata tcacattgca atttatcagc gagatatttt cctacagcat
    71701 aagagccgcc cagaccttta aaagcattca gaccaaaacg ccaggactca tctttaatat
    71761 ggatggaccc tagtccaagc cgccggctta gatgcgccag attatgtaac ggcgtaacgg
    71821 cataattggg taatttttta tgaaatgcta acacctcacg cccaacattt ccgttaagca
    71881 aacttaaagc cgctcctgta ccatattttt tccgacgtgt attaaactgg tatttaataa
    71941 gctcatgcat aatgatacct tttgttaaag tttatttatt gaaataatat gtttttggca
    72001 attattgagt agaaacaagt aaagaactcg cgttttgtgg ctgtagtagt ggttatcctc
    72061 actttaataa accgtactga taaaagagtc gcacaatatc tattacgtcc ttttctttat
    72121 tccgctgatt atgatagtac tatgcttatt gctgttaaat ggcgcgaaaa tgcccatcgt
    72181 cgtgcaattt tcaccttttt ttaacggcct ggacgcggca aaattgcgca cagtgatagt
    72241 catcacatta aagaggttat ttgcgatatg aagcttgacg cctgggataa aaacattctg
    72301 acattattgc aacgcgataa tcgtctttct cagcgggaaa tcgccgaaca ggtcaatctt
    72361 tcaccttcgg cagtgaatcg tcgtatcgcg gcactggagg aggcgggcat aattaaaggc
    72421 aatgtcagcc ttgttgatgc tggcaaagtg ggacgcccgg tcacgattgt ggtgcaggtg
    72481 gtgatcgaaa acgagcgatt caatttactg gaagaggctc gtcaacggtt tgtcagttgc
    72541 ccgcaggtgc agcaggtcta ctacgtaacg ggcgatttcg actttttact ggtgctcaat
    72601 gttcgtgaca tggcggaata tgaaacactt acccgtgagc ttttcttttc ctcaggcaat
    72661 attaagtctt ttaaaacgat tgtcgtgatg caaaacgcca agcaagagat gcgcgtcctg
    72721 atcgagtaac gtgcgcaaag cttacaaaac cagcctaaat tctcaattgt tcgcgagcag
    72781 gtgcgaactt tttacaggtt tctttctgaa aacctgcttc cagatgcgat ttctgcttgt
    72841 ctgattgcag atgccaggta acataggaat acccccattt cgggtggaca agtgtttatt
    72901 ttttccgact attaactaga gagaatatta tgagcgttgt gcctgtagcc gacgtactcc
    72961 agggccgcgt agccgttgac caagaagtca ccgtgcgcgg atgggtgcgt acccgccgag
    73021 attcaaaagc tggcatctcc ttcctcgccg tttatgacgg ctcctgcttt gatcctgtac
    73081 aggctgtcat taataattct ctgcccaatt ataatgaaga agtattacac ctgacgacag
    73141 gctgctccgt ggtagtaaca ggtaaggttg tcgcgtcgcc gggacagggg caaagtttcg
    73201 aaatccaggc cacgaaagta gaggtcgcag gctgggtgga agatccggat acctacccga
    73261 tggcggcaaa acgccatagc attgagtatc tgcgtgaagt cgcgcatctg cgcccgcgca
    73321 ccaacctgat tggcgcggta gcgcgcgtcc gccatactct ggcgcaggcg ctgcatcgct
    73381 tcttcgatga gcagggtttc ttttgggtct ctaccccgct gattaccgct tccgataccg
    73441 aaggcgctgg cgaaatgttc cgcgtctcaa cgttggatct ggaaaacctg ccgcgtaacg
    73501 accagggcag agtagatttt gacaaagact tttttggcaa agaatcattc ctgaccgtct
    73561 ccggccagct caatggtgaa acctatgcct gtgcgctgtc caaaatctat acttttgggc
    73621 cgaccttccg cgcggaaaat tccaacacca gccgccacct ggcggagttc tggatgctgg
    73681 agccggaagt ggcgttcgcc gatctggaag acaacgcccg tctggcggaa gccatgctga
    73741 aatatgtctt caaggcggtt ctggaagagc gtgcggatga catgaagttc tttgccgaac
    73801 gcgtggataa agacgctatc gctcgtctgg agcgttttgt ctccaccgac tttgctcagg
    73861 tggattacac cgatgcggtc gccattctgg aacgctgtgg taagacattt gaaaacccgg
    73921 tgttctgggg cgtcgacctt tcttccgaac acgaacgtta tctggcggaa gagcatttca
    73981 aagcgccggt agtggtgaaa aactatccga aagaaattaa agcgttttac atgcgcctta
    74041 acgaagatgg caaaaccgtg gcggccatgg atgtgctggc gccgggaatc ggcgaaatca
    74101 tcggtggttc ccagcgtgaa gagcgtctgg atgtgctgga tgcccgtatg gccgaaatgg
    74161 ggctgaataa agaggattac tggtggtatc gcgacttgcg tcgctacggt actgtaccgc
    74221 attccggctt tggcctgggc tttgaacgcc ttatcgctta cgtcacgggt gtgcaaaacg
    74281 tgcgcgatgt tattccgttc ccacggaccc cacgcaacgc cagcttctga tttttacgtc
    74341 acactcaagg ccagctatgc tggccttttt tttcgcctga atgtcagttt tattatcaat
    74401 aagtaaataa atttaattac aaccctctga attacaacat cttgttactg tatatttcac
    74461 gaaaatattt acacataaaa attaatcctt aattttattg cggattagat ttttctgctc
    74521 taatagcaca atttttcacc acaatttcgg acatcaagac ttctaaatgg ctatttttat
    74581 gaaatagctc gtctgctgtt ttttcaggca caacggtgtc gcaaaccaat aaatgtaata
    74641 aaatcatagt gataaaataa aaataatcaa atcaaagcga gaactcaggg gaagtttgac
    74701 gttgttcaca aagttccgcg aaaataacat ttatttacat atttttcctt ttgaaaccaa
    74761 atatttatat ttgtagcact ttcacagtag cgaaacgtta gtttgaatgg aaagtttgaa
    74821 tggaaagatg cctgtcagac acataaagac accaaactct catcaatatt tctgtaaagt
    74881 tttattgaca gaatttattg acggcagtgg caggtgtcat ataaaaaaac caatgagggt
    74941 aataaataat gatgaagcgc aaaatcctgg cagcggtgat ccctgccctg ctggctgctg
    75001 caaccgcaaa cgcagcagaa atttataata aagatggtaa taagctggat ctgtacggta
    75061 aagccgtggg tcgtcacgta tggacaacga ccggcgatag taaaaatgcc gaccagactt
    75121 atgcccagat tggttttaaa ggggaaacgc agattaacac cgatctgacc ggtttcggtc
    75181 agtgggaata ccgtactaaa gcagaccgcg ctgaaggcga acagcagaac tcgaatctgg
    75241 tacgtctggc tttcgcgggt ttgaaatacg cggaagtggg ttcaatcgat tatggtcgta
    75301 actacggtat cgtttacgat gttgaatcct ataccgatat ggccccctac ttctccggcg
    75361 aaacctgggg cggcgcctat accgataact acatgaccag ccgtgctggc ggtttgttga
    75421 cctaccgtaa ctctgacttc tttggtctgg tggacggtct ctctttcggt atccagtatc
    75481 agggtaaaaa tcaggacaac cacagcatta actctcagaa tggcgatggc gtaggttaca
    75541 ccatggcata tgagttcgac ggctttggcg tcaccgcagc gtacagcaac agcaagcgta
    75601 ctaacgatca gcaggatcgc gatggtaatg gcgatcgcgc agaatcgtgg gccgttggcg
    75661 cgaaatatga tgcaaacaac gtctacctgg ctgccgtata tgctgaaacc cgcaatatga
    75721 gcattgttga aaatacggtt accgataccg tggaaatggc aaacaaaacg cagaacctgg
    75781 aagtggtcgc tcagtaccag tttgacttcg gcctgcgtcc ggcaatctcg tatgtgcaga
    75841 gtaaaggtaa gcagttgaac ggcgccgacg gctcggccga tctggcgaaa tatattcagg
    75901 cgggcgcgac ttactacttc aacaaaaaca tgaacgtatg ggttgactac cgtttcaacc
    75961 tgctggacga aaacgactac agctccagct acgttggcac cgacgatcag gcggctgtcg
    76021 gtattactta ccagttctga tcagcagacc cctttgtttt atgcctcaaa aacaggactt
    76081 cggtcctgtt tttttatctc tcttagagaa aatgtgcgtc tttcaaaaac aggcgggctt
    76141 tttagcgcta acggttggca ttttgtaaat ctgccgttaa cctgatagcg gatttccctt
    76201 ctgtaactat aatggaacct cgtcatgttt gagaacataa ccgccgctcc tgccgacccg
    76261 attttgggcc tggccgatct gtttcgcgcc gatgaccgtc cagggaaaat taaccttggc
    76321 attggcgtat ataaagatga aaccggcaaa acaccggtgc tcaccagcgt taaaaaagcc
    76381 gagcagtatt tactggaaaa tgaaacgacg aaaaactatc tcggcattga cgggattccg
    76441 gaatttgctc gctgcactca ggaactgctg ttcggcaaag gcagcgcgct gattaatgat
    76501 aagcgcgcac gcacggcgca aacgccgggc ggtaccggcg cgttacgcat tgccgccgac
    76561 tttttggcaa aaaatactcc ggtaaaacgg gtgtgggtga gcaaccccag ctggccgaac
    76621 cacaaaagcg tgtttaacgc tgccggcctg gaagttcggg agtacgctta ctacgatgcg
    76681 gaaaatcact cgctggattt tgaagcgcta caagccagcc tgagcgaagc acaggccggc
    76741 gatgtggttc tgttccacgg ttgctgtcat aacccaaccg gcattgaccc tactctggaa
    76801 cagtggcagg ttctggctga gctttccgtt gaaaaagggt ggctgccgct attcgatttc
    76861 gcctaccagg gctttgcccg cggcctggaa gaagatgcgg aaggtctgcg cgcctttgcc
    76921 gcgctgcata aagagctcat tgtcgccagc tcctactcca aaaacttcgg cttatataat
    76981 gagcgcgtcg gcgcctgcac cctcgttgcc gccgatgcgg aaaccgtgga tcgcgctttt
    77041 agccagatga aatccgccat tcgcgctaac tactccaacc caccagcgca cggcgcgtcc
    77101 atcgtcgcga ctatcctgag taatgacgcc ctgcgcgcta tctgggaaca ggaactgacg
    77161 gacatgcgcc agcgtattca gcgtatgcgt caactgttcg tgaatacctt gcaggaaaaa
    77221 ggcgcgaacc gtgacttcag ctttattatc aagcagaacg ggatgttctc attcagcggt
    77281 ctgaccaaag atcaggtgct gcgtctgcgt gaagagtttg gcgtttatgc cgtggcttct
    77341 ggtcgcgtga acgtggcggg catgaccccg gataatatgg cgccgctgtg cgaagccatt
    77401 gtcgcggtac tataaaaagc tgccgactgg cgtgaccgat aaaaaagcct gcacattgca
    77461 ggctttttca ttctgcttac cagaccggca tctcatcttg caggaaggaa ttatgcagac
    77521 gctcgtatcc gagcgtagag agcgggccgt ggccaggaat aaaggtcaca tcatcgccaa
    77581 gcggcaataa tttacgctta atggcgtcaa tcaactgggt gtgatcgccg cgaggaaaat
    77641 cgctgcgccc gacgccacct ttgaaaatca catcgccgga gatcagcagt tgcgactgtt
    77701 catcaaagaa aaccacgtgt cccggcgtgt gtcccggaca atgtaacacc tgtaacgtca
    77761 cattccccac gctgacgcga tcgccgtcgt tcagccagcg atcaggcgtc agcggctgac
    77821 actcatccag accaaacatg cggctttgcg ccggcagtcc ttgcagccag aactcatctt
    77881 ctttttccgg accgataaca ggaacgccgt aatgctgcgc cagttcactc gccgcgccga
    77941 catgatcgag atgcccatgc gtgagtaaaa tttgcatcaa cgtcacgccg ctggcgtcca
    78001 cttcctgttt aattttttcc gcgtcgccgc ccggatcgac cagcgccgcc agccgggttt
    78061 gttcgcacca gattaatgaa cagttctggg agaacgcggt gaccggaata atacgatagt
    78121 tcatactgct cctttgatta agcctcgctg attaccagtg ccgcgctggc ccggtatcaa
    78181 tatgcacaaa gttactacgt gggtaatatc ctacaccacc tgcgcgcata gataacgccg
    78241 ctttgcgaat attgctcagc gccacgccct caatatgaaa atccatcgcc tgcccttttg
    78301 tatggtagct ttttttcgct acgccgctgc tacgggcgcg taattcatta ttggtatcaa
    78361 gagaacggta gcctgagatg agctgcacag gtttacgcgt ccctaacagc ccctgaagtc
    78421 ggtaaagttg gtcaaacagg cggggatcga ttgatcggac tttattcgcg cgatagtcac
    78481 ggaaaaaatg gtttaacttt gctaattcat cctgaatgta ggctcttcca tcgaaaaact
    78541 ccgccttgat tgactctccg gtatggagat tgtttaacgt caaaatgcgc gggcgtgggg
    78601 tcgagagtgt ggcaaacgct ggcgagggca ggatggcggc gccgagagcg acaccaccaa
    78661 gcgccagcag cttgcggcga ttagcgtcaa atttgtccat gataatcagg tctacaggtc
    78721 aatgttatcg ttaatacact tctaccttta agcagacatg ataccggctg gcacagactt
    78781 ctgaacggcc cggtcgactt aaaggttgtt gtatatgcac ttctggcgca cgaaaggcac
    78841 cttaactggc gataaagccc gcgtcaagat ggccctcccc cagccacaac gggggtctac
    78901 agcgaaacgc cccgttgaag ccaaacatta ggacaacata tttaccagaa cttcttcatt
    78961 tacctgatta attgttcaac ctttggcaca atttgtgcgc tggatcgcgc tgtgagatcg
    79021 taattgtaaa tatctgtacg atattgcata cgtccatctg cgccgacaaa cgcggtcaga
    79081 tagtaaagat ttactggaat gttctgccgg atattgacat accgcgtgtc gccttgcttc
    79141 agggcgccag agatccgcgc atcgttccag ccagcatcct gcaaaagcat attcgccagt
    79201 tcagaggcct tattgacccg cacgcagccg gaacttaacg ccctggcgtc acgctgaaaa
    79261 agattatggt taggcgtatc gtgcagatag atcgcatctg aactcggcat attaaattta
    79321 taacgcccca gcgaattgtg cgcgcctggc gcctgctgga aacggaacgg aagattcgat
    79381 ggcgtaatgg tggcccagtc aacctgccac ggatcgatcg cttctttgct gttccagccg
    79441 cgcatcacgg tgtagccatg gcgctccaga tagcctgggt cattccacac cttcggtaaa
    79501 atgtctttac gcgcaagcgt gggcggaacg ttccacggcg ggttcaccac cacattattc
    79561 agcgcgctgc tcatcatcgg cgttttacga tcgggacgcc cgacgatcac ccttgaagcc
    79621 agcacctggt tgccattctg atagtagacc agcgaataag cgggaatgtt taccataata
    79681 ccggtagaga gttccgccgg cagcaggcgt aaacgttgga tattcagtgc cagtacgcct
    79741 gcgcgttgcg cgggggtcat attaagccag ttacgcgtcg ccgggccaat gacgccatcc
    79801 gcccccagtc cttgccatgc ctgaaaacgc tttaccgcct cgaccagttc acgatcgtag
    79861 gcgcgtgccg ccggagccgg cttactacgg cgggccgttg gttcgtcgac cggctgcgcc
    79921 accgatgttt cgtcgactac ggcggagggg ctgacgacgg cactatcaga ggtgttatcg
    79981 ccgggtaagg ctatctttgg accgccatcc agcatccccg tacgctgtaa tatttcgcgc
    80041 agcgcaggca catcgttact ccattgcccc gggcgcagcg tcgcggtatt ggtcaactgc
    80101 ggccacgggc gagagtccgc caccagcttc agcagtgcgt catgcatggg cgcatactgt
    80161 ggatgctgcg gcgccaggct ggcgacaaac atcggcaact gcccctcttc cagcgcgatt
    80221 tgccactggt taatcaccga gactggcggc gtcgccaatg cgtaaggttt gttgctatat
    80281 agccagcgtt ggcctttgac ggggatattc gcaatgaaat ggagatagcc catcatggcg
    80341 tctgacaaca caacatcgcg cgccataccg tttacggcgg gagcggtcaa caatgccacc
    80401 caggcggtaa actgcggctg gaatccggcg atcgccacct ccgccaactg ttgctggaag
    80461 gctttcaccg catcgcgatt atcccacatg ggcttcatgt cgcgcgcggc atacagcaat
    80521 gtcagctggc tcatatagac cggcgtatag ccggaaggaa gctgcgactg taaatcagcc
    80581 cgaactttct cggctgaaac gccctccggc agcggctgaa tcccggccag aatcgccgtc
    80641 gcggcggatt gcttctgcgg cccagcctga cccgtcgcgg caacggcgct atcgccaggt
    80701 atcatttcag gctcatcggc ctgcgcattg aacagtggag cgaatgttac ggccaggcat
    80761 aaactgattg ccgacagaca acgaccacac atcttattaa gcaacatccc ttgccccctg
    80821 ttttcgttat catactccgc atgactgtgc tgcccgcagc gcgggtcaac ctcaaccaat
    80881 gcttttgttt agtatgacga gtcagcctgc tcactcgtca ggcttaactc cagtatataa
    80941 agttcgttac gtttttgcct aacctaatgt aaagaagttt aaagaaaata cactacccgg
    81001 agagattttt cagataaaga aaaaggcggc tttcgccgcc ccaggctaat gataaagcag
    81061 aacttgttat gccggatgcc ggcataaccg acttatccgg ccttgcctga taagcgaggc
    81121 gccatcaggc acttcatcgt ttctgccgtg tttaactcgc ttctgaaggc gtatcttccg
    81181 cctgcgtacc gggaagcgtt tccggaagct gcggcgcaaa gccacgcagc ccgacaacat
    81241 gaacatgctc agtattctga aacactttac gcaccagttt atacgtcgtg cccttctccg
    81301 gactgatgtt ttccggcgca gcgatgatga gctgcatctg caaacgttcg catagttcaa
    81361 acagcgtggc gatagagcgc gcatccagac gcgccgcttc atcgaggaac agcaggcgac
    81421 atggcgaaat atctttcccg cgcagtctgc gcgcttcgtc ttcccagctt tgcaccacca
    81481 tcaccagaat tgacatccct gttccgatag cttcacccgt tgatagcgcg ccggattccg
    81541 cacgcagcca gccgtcagac ccacggttaa cttcaacttc catttccaga tagttacggt
    81601 agtccagcaa ctcctcgccg atggtctgcg gcgtgcgttg acccatatcg atctgcggat
    81661 tcaggcgctg gtacagtttc gccagcgctt cggagaaggt cagacgattg ctgttaaaca
    81721 gatcctgatg ctgctcctgc tgttctgaaa gcacatccag caaggtggca tgcgtttcac
    81781 gcacgttgac gtttaaccgc acgctattca cctggccaaa cgagacgctt tgcaaaccct
    81841 ggttcagcat acggatacgg ttctgctcac gctggatagt tttgcggatg atgtttgcca
    81901 cgctgcggga actgatcgcc agcttttgct cacgcgatgt cagctcttcc gtcagacggc
    81961 tcagctcaat ctccatttgt tcaatggctt caaccggatc gtcggtacga ataatatcct
    82021 gacgaatacg ctcgcgcaga tgctggtaaa cggccacaaa gaactggatt ttacgttccg
    82081 ggcgtttcgg atcttccgac agacgcaata cgtcgcgcag atgttcgtta tccgcgacgg
    82141 ccagacgcag cgcgcccaac gccttatccg acatggagcg cagttcatcc gccgacagat
    82201 aagccagctc acgacggtgc agacggcgtt ccacgccatt gtctttcacc atccgcatga
    82261 ccgcgcacca gccggctttc gcggtcacga cctgctcgcg catttcatga taatcgcgct
    82321 ccagcttgcg cagcttacgg gtcaggttct ccatctccgc ttcgcagaag gtgagcgctt
    82381 tctcaagctg attgcgacgc gaacggttat tgctcaactg agcgtgcagt tcatcccgac
    82441 gctggcgggc
//
LOCUS       DAGWFR010000004        77322 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.004, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000004 DAGWFR010000000
VERSION     DAGWFR010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 77322)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 77322)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..77322
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.004"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..81)
                     /locus_tag="MOX77_000277"
     CDS             complement(<1..81)
                     /locus_tag="MOX77_000277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family transcriptional regulator"
                     /protein_id="HCA3355956.1"
                     /translation="MSYLNRDERREVILQAAMRVALAEGFA"
     gene            199..1686
                     /gene="smvA"
                     /locus_tag="MOX77_000278"
     CDS             199..1686
                     /gene="smvA"
                     /locus_tag="MOX77_000278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl viologen efflux MFS transporter SmvA"
                     /protein_id="HCA3355957.1"
                     /translation="MFRQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELL
                     WIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSHTASWLIATRV
                     LLAIGAAMIVSATLAGIRATFCEEKHRNMALGVWAAVGSGGAAFGPLIGGILLEHFYW
                     GSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHAVMLIIAILLLVYSAKTALKG
                     NLSLWVISLTLLTGALLLGLFIRTQLATSRPMIDMRLFTHRIILSGVVMAMTAMITLV
                     GFELLMAQELQFVHGLSPYEAGVFMLPVMVASGFSGPIAGALVSRLGLRLVATGGMAL
                     SALSFYGLAMTDFSTQQWQAWGLMALLGFSTASALLASTSAIMAAVPAEKAAAAGAIE
                     TMAYELGAGLGIAIFGLLLSRSFSASIRLPAGLEAQEIARASSSMGEAVQLANSLPPT
                     QGQAILDAARHAFIWSHSVALSSAGSMLLLLAVGMWFSLAKAQRR"
     gene            complement(1711..2089)
                     /locus_tag="MOX77_000279"
                     /pseudo
     CDS             complement(1711..2089)
                     /locus_tag="MOX77_000279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460532.3"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
     gene            2205..3335
                     /locus_tag="MOX77_000280"
                     /pseudo
     CDS             2205..3335
                     /locus_tag="MOX77_000280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460529.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
     gene            complement(3328..4338)
                     /gene="adhP"
                     /locus_tag="MOX77_000281"
     CDS             complement(3328..4338)
                     /gene="adhP"
                     /locus_tag="MOX77_000281"
                     /EC_number="1.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase AdhP"
                     /protein_id="HCA3355958.1"
                     /translation="MKAAVVTQDHQVDVTEKTLRPLRHGEALLKMECCGVCHTDLHVK
                     NGDFGDKTGVILGHEGIGVVAEVGPGVTSLKPGDRASVAWFYEGCGHCEYCNTGNETL
                     CRNVKNAGYTVDGGMAEECIVVADYAVKVPEGLDSAAASSITCAGVTTYKAVKISHIK
                     PGQWIAIYGLGGLGNLALQYAKNVFNAKVIAIDVNDGQLKLAEEMGADLTINSRTEDA
                     AKIVQEKTGGAHAAVVTAVAKAAFNSAVDAVRAGGRVVAVGLPPEAMNLDIPRLVLDG
                     IQVVGSLVGTRQDLTEAFQFAAEGKVVPKVALRPLEDINVIFKEMEQGQIRGRMVIDF
                     RR"
     gene            complement(4620..6317)
                     /locus_tag="MOX77_000282"
     CDS             complement(4620..6317)
                     /locus_tag="MOX77_000282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent malic enzyme"
                     /protein_id="HCA3355959.1"
                     /translation="METTTKKARSLYIPYAGPVLLEFPLLNKGSAFSVEERRNFNLSG
                     LLPEVVESIEEQAERAWLQYQGFKTEIDKHIYLRNIQDTNETLFYRLVQNHLEEMMPV
                     IYTPTVGAACERFSEIYRRARGVFISYPNRHNMDDILQNVPNHNIKVIVVTDGERILG
                     LGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYMGWRHPRI
                     TDDEYYAFVDEFIQAVKQRWPDILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAA
                     VTVGTLIAASRAAGSQLSEQKIVFLGAGSAGCGIAEQIIAQTQREGLSEDAARQNVFM
                     VDRFGLLTDRMPNLLPFQAKLVQKCDNLQHWDTENDVLSLLDVVRNVKPDILIGVSGQ
                     TGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFSPVI
                     WKDKVYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKHSPLVNNGEGLV
                     LPALKDIQVVSRAIAFAVGKMAQQQGVAVKTSAEALQQAIDDNFWKPEYRDYRRTSI"
     gene            complement(6494..6637)
                     /gene="sra"
                     /locus_tag="MOX77_000283"
     CDS             complement(6494..6637)
                     /gene="sra"
                     /locus_tag="MOX77_000283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stationary-phase-induced ribosome-associated
                     protein"
                     /protein_id="HCA3355960.1"
                     /translation="MKSNRQARHILGLDYRISNQRKVVTEGDTSSVVNNPTGRKRRAD
                     SQK"
     gene            complement(6732..6947)
                     /gene="bdm"
                     /locus_tag="MOX77_000284"
     CDS             complement(6732..6947)
                     /gene="bdm"
                     /locus_tag="MOX77_000284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm-dependent modulation protein"
                     /protein_id="HCA3355961.1"
                     /translation="MFTYHSANTSAAQPALVNAIEQGLRAELGVVTEDDILMELTKWV
                     EASDNDILSDIYQQTINYVVSGQHPTL"
     gene            7459..7890
                     /locus_tag="MOX77_000285"
     CDS             7459..7890
                     /locus_tag="MOX77_000285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HCA3355962.1"
                     /translation="MTIHKKGQAHWEGDIKRGKGTVSTESGVLNQQPYGFNTRFEGAQ
                     GTNPEELIGAAHAACFSMALSLMLGEAGFTPTSIDTTADVSLDKVEAGFAITKIALQS
                     KVAVADIDASTFDQIIQKAKAGCPVSQVLNAEITLDYQLNA"
     gene            complement(8011..8922)
                     /gene="hlyE"
                     /locus_tag="MOX77_000286"
     CDS             complement(8011..8922)
                     /gene="hlyE"
                     /locus_tag="MOX77_000286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin HlyE"
                     /protein_id="HCA3355963.1"
                     /translation="MTGIFAEQTVEVVKSAIETADGALDLYNKYLDQVIPWKTFDETI
                     KELSRFKQEYSQEASVLVGDIKVLLMDSQDKYFEATQTVYEWCGVVTQLLSAYILLFD
                     EYNEKKASAQKDILIRILDDGVKKLNEAQKSLLTSSQSFNNASGKLLALDSQLTNDFS
                     EKSSYFQSQVDRIRKEAYAGAAAGIVAGPFGLIISYSIAAGVIEGKLIPELNNRLKTV
                     QNFFTSLSATVKQANKDIDAAKLKLATEIAAIGEIKTETETTRFYVDYDDLMLSLLKG
                     AAKKMINTCNEYQQRHGKKTLFEVPDV"
     gene            complement(9053..9688)
                     /locus_tag="MOX77_000287"
     CDS             complement(9053..9688)
                     /locus_tag="MOX77_000287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000778346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3355964.1"
                     /translation="MKLSVTLAFFGYMMVSSMAQASDINMWREPKPVVKEGKYYSLIM
                     DRGELQKAVKSSSNNYLFSEKGAGVKPLVLIGSPVEISEFMLQNKTRSIENHIKGLPD
                     IYMGVTKYKPKQRFTGLFPLQDILTQTVDQVSKFVPGTDITDAVGIPSDLKALQQAIL
                     AMKQKDKISKNILYVKFSYLPEDGMVKVGSKTVSFGRILEKMQQSNRTLRR"
     gene            10457..10786
                     /gene="hdeB"
                     /locus_tag="MOX77_000288"
     CDS             10457..10786
                     /gene="hdeB"
                     /locus_tag="MOX77_000288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid-activated periplasmic chaperone HdeB"
                     /protein_id="HCA3355965.1"
                     /translation="MNKFSLATAGIIVAALVTSVSVNAATDTTKTNVTPKGMSCQEFV
                     DLNPQTMAPVAFWVLNEDEDFKGGDYVDFQETETTAVPLAVELCKKNPQSELSKIKDE
                     IKKELSK"
     gene            10929..11714
                     /locus_tag="MOX77_000289"
     CDS             10929..11714
                     /locus_tag="MOX77_000289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OBAP family protein"
                     /protein_id="HCA3355966.1"
                     /translation="MKILPLALFIIPFLAGCGANNTPPQTPIPGEKTSAKLRTLETGA
                     AAIQSRPPVDAISTYLDGFHFYSGDKNGQMEAHHYVTVLNEDVMQAVIYDGNTKNARL
                     MGVEYIISERLFKTLPPEEKKLWHSHQYEVKSGSLVAPGLPQVADKALMSKIVNTYGK
                     TWHTWHTDRDKTLPMGIPALMMGFTGDGQLDPALLADRDRRLGIDTQAIKRERQDLPE
                     HPVIKGANAWEQGEVIQLQRVQGSGEHGRGDTAHFGISEQSRQ"
     gene            11843..13627
                     /gene="treZ"
                     /locus_tag="MOX77_000290"
     CDS             11843..13627
                     /gene="treZ"
                     /locus_tag="MOX77_000290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malto-oligosyltrehalose trehalohydrolase"
                     /protein_id="HCA3355967.1"
                     /translation="MSSKIFCKSWGAEYIAADVVRFRLWATGQQKVMLRLAGKDQEMQ
                     ASGDGWFTLDVSGVTPGTEYNFVLSDGMVLPDPASRAQKTDVNGPSYVIDPGSYAWRN
                     TGWKGSRWEQAVVYEMHTGTFTPEGTFHTAIAKLPYLAELGVTVIEVMPVAQFGGERG
                     WGYDGVLLYAPHSAYGTPDDFKAFIDTAHGYGLSVILDIVLNHFGPEGNYLPLLAPAF
                     FHKERMTPWGNGIAYDVDAVRRYIIEAPLYWLTEYHLDGLRFDAIDQIEDSSARHVLV
                     EIAQRIREDITDRPIHLTTEDSRNIISLHPRDQDGNAPLFTAEWNDDFHNAVHVFATG
                     ETQAYYNDFADAPEKHLARALAEGFAYQGEISPQTGEPRGVKSTGQPPVAFVDFIQNH
                     DQVGNRAQGDRLITLAGAERTKVLLATLLLSPHIPLLFMGEEYGESRPFLFFTDFHGD
                     LARAVREGRAKEFADHAGENVPDPNAPETFQRSKLNWKQQHSEEGKAWLAFTRELLLL
                     RQKHIVPLLSAARESSGTVLQTAPGFIAVSWRFPGGTLSLALNISATTVLLPDLPGKT
                     LFAWPNESTGSLSQHSLIVRLAQGESAS"
     gene            13624..16152
                     /gene="treY"
                     /locus_tag="MOX77_000291"
     CDS             13624..16152
                     /gene="treY"
                     /locus_tag="MOX77_000291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malto-oligosyltrehalose synthase"
                     /protein_id="HCA3355968.1"
                     /translation="MIPTATYRLQFRNSMTFDRAAALVPYLKNLGISHLYASPIFTAT
                     KASTHGYDVTDANEIEPSIGGREGFERLVAELKAQGLGLIIDIVPNHMASSLENAWWR
                     DVLEYGKESRYARHFDIDWSRRLTLPFLGDTFDAVLGNGEIAIKPDPVTGKPTFAYYD
                     NYYPLAPATWQGREAEILALTDKAAIADLHERQPWKLMSWRDAARSLSYRRFFEVTGL
                     VGMRVEDKIVFDDTHRLILELVRTGAVDGLRIDHIDGLADPKAYLARLRQEVGPACYI
                     TVEKILAKGEQLPDDWPVSGTTGYEFIASLAEVLVDDKQIDNLRQAYETVTGAPVDMR
                     AELRAAKLLMVDRNFEGEFTRLLALALSIASELQIAQEESVVRQALRELLIAFPVYRT
                     YGTAEGLPPTDICLLHRIVERVKTLENPPQPEALTFLSRLLTGDVPVSSQEEATQFRV
                     RFQQLTGPLMAKSVEDTLFFRQNMGLALNEVGAEPVTHHFSIERFHHEMKTRQARQPD
                     ALSGTSTHDTKRGEDARARLYTLTEAPEQWSECLARWRQMNQTHVKFLNDGTAPKSAD
                     TWMLYQALTGVWPPMLQPQDETGLNALKIRFEAFVEKALREAKLRTDWVDSNEAYETA
                     MLDYARYLLAPDNQTFLQDFYRSLQPFIRAGLVNSLTQTVIKLTAPGVPDIYQGSEAL
                     NFSLVDPDNRREPDFATLAQQLDQLTPGVFSREESWLDGQVNQYATAALLRLRQQNHE
                     LFRFGDYIPLRAVGQRADKVIAYARVNHDDALIVVAPRLVFAECDGLLSQSHSGFWSG
                     TDIIIPGQLNQRRYRNVLTQERLMPGERLSLASHQGGVLVLMSD"
     gene            16209..18284
                     /gene="glgX"
                     /locus_tag="MOX77_000292"
                     /pseudo
     CDS             16209..18284
                     /gene="glgX"
                     /locus_tag="MOX77_000292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460517.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen debranching protein GlgX"
     gene            complement(18397..19587)
                     /locus_tag="MOX77_000293"
     CDS             complement(18397..19587)
                     /locus_tag="MOX77_000293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000336171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HCA3355969.1"
                     /translation="MCYNQTVESEVIIDNFERHFGDGAGKLLPMWVSDFDFACPPEVQ
                     AALHQRIEHGVFGYSERDEAYFNALLHWFSSRHQLTLKQEWVCSVEGVVPGLALLVQM
                     LTHPGDGVVVQGPYYGSFAKIITLNGRKLLENPLSESPDEGYQMDFCQLERLFRHERP
                     PLMILCNPHNPTGRCWSANELEQLLLLCEAYDVTLISDEIWADLLLPCETFTSVLHLG
                     ERWHKRVISATAASKTFGLSSLRISNFLIPDPTLRQRFLSRLDAHGLDVFNALSVQAA
                     TTAWNESRQWLDSLLDYLAENRRWFVEQATEHLPWARIVPAQGTYLLWMDCKKLGLDD
                     EQLKWVMADVAGIAPSMGSGFGPAGSGFIRLNLGCPRTYLEMAIDGLKRISVKTIKGI
                     PTGG"
     gene            19539..20516
                     /locus_tag="MOX77_000294"
                     /pseudo
     CDS             19539..20516
                     /locus_tag="MOX77_000294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001681585.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(20631..20738)
                     /locus_tag="MOX77_000295"
                     /pseudo
     CDS             complement(20631..20738)
                     /locus_tag="MOX77_000295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000253166.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1493 family protein"
     gene            complement(20739..20930)
                     /locus_tag="MOX77_000296"
                     /pseudo
     CDS             complement(20739..20930)
                     /locus_tag="MOX77_000296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002211098.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            21084..21212
                     /locus_tag="MOX77_000297"
                     /pseudo
     CDS             21084..21212
                     /locus_tag="MOX77_000297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460510.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system mRNA interferase
                     toxin, RelE/StbE family"
     gene            21206..21328
                     /locus_tag="MOX77_000298"
                     /pseudo
     CDS             21206..21328
                     /locus_tag="MOX77_000298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418669.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
     gene            complement(21380..22459)
                     /locus_tag="MOX77_000299"
     CDS             complement(21380..22459)
                     /locus_tag="MOX77_000299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000954687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-adenosylmethionine:tRNA
                     ribosyltransferase-isomerase"
                     /protein_id="HCA3355970.1"
                     /translation="MLTEKYDFRITDQMTIPLRPHWIANDSYREKCKMLVLNRSKGEI
                     HKVDFSKVTDYIKEGDVICFNDSTIINHMFICKTRRNRLIKIVLEGFLLNNRVIISGL
                     LKERLNANDVFYLVDNPEISIKIEQRFGEESQYRAVVENHEALICYLASHGERLDEYV
                     DSSLFYKYPDAYRSVFSKKYGSLEIPSAGIHFTWDLIQKIKDKGGLISFITLHVASTE
                     MLSNRKIQTKCVEEVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYS
                     REHNCLKASSGWTALYIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAYA
                     SEDIQSCQFDMFGDCMLIIQDEGQG"
     gene            complement(22641..23129)
                     /locus_tag="MOX77_000300"
     CDS             complement(22641..23129)
                     /locus_tag="MOX77_000300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HCA3355971.1"
                     /translation="MSENKNVQDTHISEQMKALHGALIRVVSALNRPRNDEKLIAEAG
                     IQLDRALFSILISIERLGPIGVVELAERAGRDYTTVSRQVAKLEKLGLIIRQHNVIDR
                     RIREAVISRTGKAMTERIDAAREQMGNVVFKDWPQDKIDIFVRLMQKFADAMDSDASM
                     PE"
     gene            23174..24336
                     /locus_tag="MOX77_000301"
                     /pseudo
     CDS             23174..24336
                     /locus_tag="MOX77_000301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460506.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
     gene            24326..25567
                     /locus_tag="MOX77_000302"
     CDS             24326..25567
                     /locus_tag="MOX77_000302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3355972.1"
                     /translation="MNTNVYENTDSETITPLNKRRILPVFLLVGLYAASTAAVMSVLP
                     FYIREMGGSPLIIGIIIATEAFSQFCAAPLIGHLSDRVGRKRILIVTLAIAAISLLLL
                     ANAQCILFILLARTLFGISAGNLSAAAAYIADCTHVRNRRQAIGILTGCIGLGGIVGA
                     GVSGWLSRISLGAPIYAAFILVLGAALVATWGLKDPSTTSRTTDKIASFSARAILKMP
                     VLRVLIIVMLCHFFAYGMYSSQLPVFLSDTFIWNGLPFGPKALSYLLMADGVINIFVQ
                     LFLLGWVSQYFSERKLIILIFALLCTGFLTAGIATTIPVLIFAIVCISIADALAKPTY
                     LAALSVHVSPARQGIVIGTAQALIAIADFISPVLGGFVLGYALYGVWIGIAISVAIIG
                     LVTAMIYLSKSSPLIAKPETE"
     gene            25637..27193
                     /locus_tag="MOX77_000303"
     CDS             25637..27193
                     /locus_tag="MOX77_000303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoPQ-activated pathogenicity-related family
                     protein"
                     /protein_id="HCA3355973.1"
                     /translation="MFKRYLWKLCWLAFALVKRGESMKKIYLVVIVLFFISTKVYTLL
                     HNNIFFCRNSPECDLSHVLPDYREQISGTPLKYTLISTAPLAQVVVRHYELLSQHWSP
                     DDMVTPAQWRHNVDIYIPETAKEHHALVVVNNGINYEKGIQIPSKPVDFTQQTLASIA
                     RDTNTIVISVSDIPNQYLTFQDDKKPLKEDESVSRSWALFMEAPEQRELMPLNIPMVT
                     AISQAMRLAKKELTQWNINSFIITGISKRGWTTWLSAIADPDVEAIVPFAIDLLDIDA
                     SLEHIYQSYGGNWPITFYPYYQQGIDEKIKSPTFTQLRQIIDPLRYLNTIYQPRLAIP
                     KYIINASGDDFFVPDNTRFYYSKLPGVKSLRIVPNMNHYSINQFAEGSLVPFINRFQS
                     KKTLPQLIGLIHHHLLTVYFSEAPVKVVRWTANNPNARDFRYACGIRYQPLTIDIPAN
                     NKISITLNEPKTGWEATYIEATFNDGYVATSQVYITPDEKYPQTAPPSVNAACQTLPG
                     RGLGENDSPD"
     gene            27370..28656
                     /locus_tag="MOX77_000304"
     CDS             27370..28656
                     /locus_tag="MOX77_000304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3355974.1"
                     /translation="MKRKTMGWLIVFLLFIVYMLNYMDRSALSITAPLIEKELGFNAA
                     EMGMIFSAFFIGYALFNFIDGWASDKVGPKTVFLIAALLWSVFCGLTGLVTGLWTMLI
                     VRVLFGMAEGPVSAAGNKIINNWISRKESATAIGIFSAGSPLGGAVSGPIVGLLALSL
                     GWRPAFGIIFLFGLVWVLLWYFIVSDKPTMSKRLAPEERIDFENHEDVILSDDGRATP
                     SLGYYMKQPMVWATTLAFFSYNYILFFFLTWFPSYLNHSLHLDIKEISIATVIPWVIG
                     AIGMVLGGVCSDVIYRITGNALLSRRLILGVCLAGAAVCVAVSGTVSTIGSAITLMSV
                     SLFLLYLTGPIYWAVIQDVVHKDKVGSVGGAMHGLANISGIIGPLVTGFIVQFSGKYD
                     YAFYLAGAIAIVSSLLVFVFVKSKGFKANESQSCVH"
     gene            28631..29656
                     /locus_tag="MOX77_000305"
     CDS             28631..29656
                     /locus_tag="MOX77_000305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding alcohol dehydrogenase family
                     protein"
                     /protein_id="HCA3355975.1"
                     /translation="MKVKAVFINKPGEVETRWVDYPHKKENEVLIKVDAAGICGSDIG
                     AFRGTNPLVTYPRIIGHEVTGIVLQEGTGMPDNIKKGDRVIVDPYIYCGHCYPCSVGR
                     TNCCENLNVIGVHIDGAMQEVVTHPAHLIHKIPDNVPSEMAPLAEPLTIALHALHRAN
                     VKAGEYVAIIGAGAIGLMAALSARHYKATPILIDIVEERLRYAQKLGVPYVLNAADDQ
                     VIDAIKNITHGTMAQVVIEASGANSAIRNTLDLASFAGRISFTGWPKQETSLPTNLIT
                     YKELDLRGSRTSAGEFDEALRMLSTLEINPQDVVSKVVNLDEIPDAVKELDRYPERYL
                     KINAVFH"
     gene            complement(29715..30506)
                     /locus_tag="MOX77_000306"
     CDS             complement(29715..30506)
                     /locus_tag="MOX77_000306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FadR family transcriptional regulator"
                     /protein_id="HCA3355976.1"
                     /translation="METTGGCFSLSCTVINYHDHQRQDGMLNPFKIPWIWIGGRMVIP
                     EVRQERLYQKIANLIIKLINDNIFPPGTFLPPERELAKQLGVSRASLREALIVLEISG
                     WIVIQSGNGVIVSDKKHLASDYTIEEILSTRELVDSHCARLAAQNDNVDVINQIEAIY
                     HRMDQAINDNNVHGFYSLDKEFHLAISEASRNRVLFDMSRMLWEQRINIPYAGLDEQS
                     GDRNVLLNLNKQHKAIVDAMRQSDADSAYEGSLEHLRYVRKIVGG"
     gene            complement(30552..31643)
                     /locus_tag="MOX77_000307"
     CDS             complement(30552..31643)
                     /locus_tag="MOX77_000307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="linear amide C-N hydrolase"
                     /protein_id="HCA3355977.1"
                     /translation="MMKKSKAMLFIAPALFSYAMAAQACTTLAIQDKQGDIFHGRTLE
                     YMQDLPSWLTYYPAGTQFDKKTPDGSQGISYQAKYPILAITSTITDGDSRDILEGMNS
                     AGLSFSENMIMNAQLPPLPASEYKQAIPVTSLGEWALARFATVGEVKQAIKEGKFWSP
                     ELHRFGDLKSPFHYAFYDKKGGSIVVEVENGKFHVYDNPTRVMTNGPAFPWHLTNLNN
                     YTQLTNVDRSSGTLGGIKVMQPDSGIAIADLPSSDTSVSRFIRGVYYTTYAPQATSAH
                     DAMNTLAHIMSRFDRPKNITVDYMGSEGEGNATRKPVSEYTVWTTLSDLTHGEMMVRG
                     YNDINYKTWSLSQFKNATAPVFEKINVKG"
     gene            32071..33174
                     /locus_tag="MOX77_000308"
     CDS             32071..33174
                     /locus_tag="MOX77_000308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase small subunit"
                     /protein_id="HCA3355978.1"
                     /translation="MQTQDTFYQVMRRHGVTRRSFLKFCSLTATSLGLSSSMIPQIAY
                     ALENKPRTPVIWLHGLECTCCTESFIRSAHPLAKDAILSLISLDYDDTIMAAAGQQAE
                     QALADVMREYKGNYIVAVEGNAPLNEDGMFCILAGEPFLEKLKRVSADAKAIIAWGSC
                     ASWGCVQAARPNPTKATPVHKLITDKTIIKVPGCPPIPEVMSAVITYMLAFDRIPPLD
                     RLGRPKMFYGQRIHDKCYRRAHFDAGQFVEAWDDEGARKGYCLYKMGCKGPTTYNACS
                     TVRWNDGVSFPIQSGHGCLGCSEDGFWDYGSFYSRATGIPQTGIEATADKIGLGVAGV
                     AGAAAIAHATVSAIKHARNKNNTSSENATEKKK"
     gene            33177..34979
                     /locus_tag="MOX77_000309"
                     /pseudo
     CDS             33177..34979
                     /locus_tag="MOX77_000309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460498.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nickel-dependent hydrogenase large subunit"
     gene            34930..35673
                     /gene="cybH"
                     /locus_tag="MOX77_000310"
     CDS             34930..35673
                     /gene="cybH"
                     /locus_tag="MOX77_000310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni/Fe-hydrogenase, b-type cytochrome subunit"
                     /protein_id="HCA3355979.1"
                     /translation="MLLIIMEGSWSGFRYDDDDSEVSMHLKEITSQGYYIYEAPVRLW
                     HWITALSIVVLAVTGYFIGRPLPSIQGEATFMFWMGWIRLIHFTTAYIFTVALLFRIY
                     WACVGNEYAREMFLVPFWRRAWRKGVISEIRWYFFLEKEAHRYYGHNPVAGLAVMFYF
                     WMSVLMVCSGFALYGEGLGTDSWAYQWFGWMIRLTGNDSLALHFWHRLGMWFIIAFVI
                     AHVYTAIREDIMSRQSVISVMISGWRWFR"
     gene            35679..36287
                     /gene="hybD"
                     /locus_tag="MOX77_000311"
     CDS             35679..36287
                     /gene="hybD"
                     /locus_tag="MOX77_000311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HyaD/HybD family hydrogenase maturation
                     endopeptidase"
                     /protein_id="HCA3355980.1"
                     /translation="MAEVTILGLGNLLWADEGFGVRAAEKLFEQYADNEKVDVVDGGT
                     QGLALLPWLQQTEKLLIMDAIDFGMAPGSLAMFRDEQVPAYLTAKKLSLHQTSFSEVL
                     ALLQLTGGQLSEIVLIGVQPECLDDYGGSLTPQVRAQLMPAVYLAQEVLAQWGITASS
                     AALPTERLNHYSLCMERYEDERPDAQSACRVGDIRVLQREKS"
     gene            36287..36586
                     /gene="hypC"
                     /locus_tag="MOX77_000312"
     CDS             36287..36586
                     /gene="hypC"
                     /locus_tag="MOX77_000312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HypC/HybG/HupF family hydrogenase formation
                     chaperone"
                     /protein_id="HCA3355981.1"
                     /translation="MCIGVPVQVISPGQWFAKCRDRHGELIDVDIRLVAPPLAGAWLL
                     TFGGAARREMDEAEAVEVLVALDSLEQAMLTQSDPLTGFADLLSRTPELPEHLKK"
     gene            36583..36993
                     /locus_tag="MOX77_000313"
     CDS             36583..36993
                     /locus_tag="MOX77_000313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase"
                     /protein_id="HCA3355982.1"
                     /translation="MTISPQNPVCPLADKGFLVTDAQTLPSLINAHPTLLVLLQSDPN
                     KHPEVADSWVIIPEILKQFPATSYTAAFADSEQSELIAREYRILKYPALLFFRQHRFV
                     GSLAGLYSWQEYSQRVAALLTTPGYRQDIPVITQ"
     gene            37011..38072
                     /locus_tag="MOX77_000314"
     CDS             37011..38072
                     /locus_tag="MOX77_000314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rubredoxin"
                     /protein_id="HCA3355983.1"
                     /translation="MNHSRTIPVVNIAGPGSQPEEEDFNFLPIPAGINLPLTPVLPEQ
                     ALPAELRVARHILTTLIRDMDNPVATLPFPLSYKLNATEQQNSGLLDQLLGEGEISAR
                     VLLSDGKEQRIQETVFTGVWRVREYNADQQRVADEIIIGPIPESIWQTHPQPPITPEL
                     PPQLAGLMNGAFIAHEIAERVKQPVKEPHIINLTLLPVNDADREYLDHFLGEGCSAIF
                     SRGYGKCRIVSTHFPGVWRVNYFNDMNTLLQDMIEIADIPDIAVAGIDDIEDAYTGLK
                     NTLEWLKEYPVTENEPVVRMECKVCWWVYDPALGDDVWQIPPGVPFNQLPDYWCCPVC
                     ETSKSGFMVIDEGNNSCKD"
     gene            38060..38830
                     /locus_tag="MOX77_000315"
     CDS             38060..38830
                     /locus_tag="MOX77_000315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001189412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP/GTP-binding protein"
                     /protein_id="HCA3355984.1"
                     /translation="MQRLTVYSHPLWITWQEAPIGRLLQGATPVYAKTLISRLFTLCA
                     QAHNAAAALLLFPEEKPDMQAAQQELARETLRRALTDWLPLFSHRQATAEEWALLRRG
                     ELSPLASTIFFDDDPQTWLAAGVKGWEAWFLQERSETARWLAAVQNIITPTLPMASSP
                     DHTLITHGPLDVSPLAIEYPLLSACCLSGKTTALRLLARCITLARSLSALPTLRWNRF
                     DDGEWKIAVVETARGWLVHQARLTTSGNITKFRQYVSP"
     gene            complement(38798..39214)
                     /locus_tag="MOX77_000316"
                     /pseudo
     CDS             complement(38798..39214)
                     /locus_tag="MOX77_000316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460490.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
     gene            39932..40474
                     /locus_tag="MOX77_000317"
     CDS             39932..40474
                     /locus_tag="MOX77_000317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HCA3355985.1"
                     /translation="MGITIMQKTSLFFSAAAITLTLMASSASAATPTAAQNEATSTVK
                     QEITESINRYLYSIDKADPTLGKQLFYVSPETSFIHPRGHERGWSQIAENFYGTTMGK
                     TFSKRTLKLDAPPAIHVYGNAAVAEFDWHFTAVRRDNGQTQHTTGRESQVWAKIPNTG
                     WRIVHVHYSGPAKTGVGEGY"
     gene            complement(40530..41444)
                     /locus_tag="MOX77_000318"
     CDS             complement(40530..41444)
                     /locus_tag="MOX77_000318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416037.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bestrophin family protein"
                     /protein_id="HCA3355986.1"
                     /translation="MIVRPQQHWIRLIFVWHGSVLSKIFSRLLLNFLLSIAVIIMLPW
                     YTMLGIKFTLAPFSILGVAIAIFLGFRNNACYARYVEARHLWGQLMIASRSILREVKT
                     TLPDERGIEDFVRLQIAFAHCLRMTLRRQPQTQVLGNYLDQEALQKVVASHSPANRIL
                     LLMGEWLAIRRRSGKLSDILFHSLNNRLNDMSSVLAGCERIANTPVPFAYTLILHRTV
                     YLFCIMLPFALVVDLHYMTPFISVLISYTFIALDALAEELEDPFGTENNDLPLDAICN
                     AIEIDLLQMNDERDIPAKRIPDKRYQLT"
     gene            complement(41700..42059)
                     /locus_tag="MOX77_000319"
     CDS             complement(41700..42059)
                     /locus_tag="MOX77_000319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4186 domain-containing protein"
                     /protein_id="HCA3355987.1"
                     /translation="MNALEPLFARLARSTFRSRFRLGIKERQYCWDKGAEVIDKHAAD
                     FIAQRLVPAHPANDGKQTPMRGHPVFIAQHATATCCRGCLAKWHQIPQGEPLSKAQQQ
                     YIVSVIHYWLVIQMNQR"
     gene            complement(42059..42985)
                     /gene="glsB"
                     /locus_tag="MOX77_000320"
     CDS             complement(42059..42985)
                     /gene="glsB"
                     /locus_tag="MOX77_000320"
                     /EC_number="3.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaminase B"
                     /protein_id="HCA3355988.1"
                     /translation="MARAMDNAILETILQRVRPLIGQGKVADYIPALASVEGSKLGIA
                     ICTVDGQHYQAGDAHERFSIQSISKVLSLVMAMRHYPEEEIWQRVGKDPSGSPFNSLV
                     QLEMEQGIPRNPFINAGALVVCDMLQGRLSAPRQRMLEVARALCGVSDITYDATVARS
                     EFEHSARNAAIAWLMKSFGNFHHDVPTVLQNYFHYCALKMSCMELARTFVFLANQGEA
                     FHLDEPVVTPMQARQINALMATSGMYQNAGEFAWRVGLPAKSGVGGGIVAIVPHEMAI
                     AVWSPELDPAGNSLAGIAALEQLTQTLGRLVY"
     gene            complement(43058..44446)
                     /gene="sad"
                     /locus_tag="MOX77_000321"
     CDS             complement(43058..44446)
                     /gene="sad"
                     /locus_tag="MOX77_000321"
                     /EC_number="1.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate-semialdehyde dehydrogenase"
                     /protein_id="HCA3355989.1"
                     /translation="MTMMTATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKK
                     WKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIKQARAEVTKSAALCDWYAE
                     HGPAMLNPEPTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLK
                     HAPNVTGCAQMIARILTEAGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGA
                     AIGAQAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIV
                     EEGIAQAFNDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAEGARLL
                     LGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAEHALALANDSEFG
                     LSATIFTADDTLAAEMAARLECGGVFINGYSASDARVAFGGVKKSGFGRELSHFGLHE
                     FCNVQTVWKNRV"
     gene            44549..45421
                     /locus_tag="MOX77_000322"
     CDS             44549..45421
                     /locus_tag="MOX77_000322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCA3355990.1"
                     /translation="MDLTQLEMFNAVALTGSITQAAAKVHRVPSNLTTRIRQLEADLG
                     VSLFIRENQRLRLSPAGHNFLRYSQQILALVDEARMVVAGEEPQGLFSLGALESTAAV
                     RIPALLAGYNQRYPKIQFALTTGPSGAMLDGVLEGKLNAAFIDGPLMHPGLEGIPAYQ
                     EEMMIVAPHGHSVVSRASEVNGYNIYAFRANCSYRRHFESWFHADGATPGTIHEMESY
                     HGMLACVIAGAGIALMPASMLNSMPGHHQVEAWPLAEKWRWLSTWLMWRRGAMTRQLE
                     AFIELLNAQLASAD"
     gene            45537..46727
                     /locus_tag="MOX77_000323"
     CDS             45537..46727
                     /locus_tag="MOX77_000323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transporter"
                     /protein_id="HCA3355991.1"
                     /translation="MTINPVSRKVAWLRVVTLAIAAFIFNTTEFVPVGLLSDIAESFH
                     MQTAQVGIMLTIYAWVVAVMSLPFMLLTSQMERRKLLICLFVLFIASHVLSFLAWNFT
                     VLVISRIGIAFAHAIFWSITASLAIRLAPAGKRAQALSLIATGTALAMVLGLPIGRVV
                     GQYFGWRTTFFAIGMGALITLLCLIKLLPKLPSEHSGSLKSLPLLFRRPALMSLYVLT
                     VVVVTAHYTAYSYIEPFVQNVAGLSANFATVLLLILGGAGIIGSLVFGKLGNRHASSL
                     VSIAIALLVVCLLLLLPAADSEAHLAILSIFWGIAIMVIGLGMQVKVLALAPDATDVA
                     MALFSGIFNIGIGAGALVGNQVSLHWSMSAIGYIGAIPACAALVWAVLIFRKWPVTLE
                     EQPH"
     gene            complement(46774..47439)
                     /locus_tag="MOX77_000324"
     CDS             complement(46774..47439)
                     /locus_tag="MOX77_000324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family NAAT transporter"
                     /protein_id="HCA3355992.1"
                     /translation="MMDLFKAIGLGLVVLLPLANPLTTVALFLGLAGNMNSAERNRQS
                     YMASVYVFAIMMVAYYAGQLVMNTFGISIPGLRIAGGLIVAFIGFRMLFPQQKAHESP
                     EAKSKSEELADEPTANIAFVPLAMPSTAGPGTIAMIISSASTVRHGGEFPDWVIMVAP
                     PIIFLAVAVILWGCLRSSGAIMRLVGKGGIEAISRLMGFLLVCMGVQFIINGVLEIIK
                     TYH"
     gene            47698..48132
                     /gene="marR"
                     /locus_tag="MOX77_000325"
     CDS             47698..48132
                     /gene="marR"
                     /locus_tag="MOX77_000325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multiple antibiotic resistance transcriptional
                     regulator MarR"
                     /protein_id="HCA3355993.1"
                     /translation="MKSTSDLFNEIIPLGRLIYMVNQKKDRLLNNYLSPLDITATQFK
                     VLCSIRCAGCITPVELKKVLSVDLGALTRMLDRLLCKGWIERLPNPNDKRGVLVKLTP
                     DGAAICEQCHQRPGQDLHQELTKNLTADEVATLEYLLKKILP"
     gene            48152..48535
                     /gene="marA"
                     /locus_tag="MOX77_000326"
     CDS             48152..48535
                     /gene="marA"
                     /locus_tag="MOX77_000326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000091194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MDR efflux pump AcrAB transcriptional activator
                     MarA"
                     /protein_id="HCA3355994.1"
                     /translation="MSRRNTDAITIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQR
                     MFKKETGHSLGQYIRSRKMTEIAQKLKESNEPILYLAERYGFESQQTLTRTFKNYFDV
                     PPHKYRITNMHGESRYMLPLNHGNY"
     gene            48564..48779
                     /gene="marB"
                     /locus_tag="MOX77_000327"
     CDS             48564..48779
                     /gene="marB"
                     /locus_tag="MOX77_000327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multiple antibiotic resistance protein MarB"
                     /protein_id="HCA3355995.1"
                     /translation="MKMLFPALPGLLLIASGYGIAEQTLLPVAQNSRDVMLLPCVGDP
                     PNDLHPVSVNSDKSDELGVPYYNDQHL"
     gene            complement(48898..49800)
                     /gene="eamA"
                     /locus_tag="MOX77_000328"
     CDS             complement(48898..49800)
                     /gene="eamA"
                     /locus_tag="MOX77_000328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetylserine/cysteine exporter"
                     /protein_id="HCA3355996.1"
                     /translation="MMSRKDGFLALLVVVVWGLNFVVIKVGLHHMPPLLLAGLRFLLV
                     AFPAIFFVARPKVPLTLLLGYGLTISFGQFAFLFCAIKFGMPAGLASLVLQAQAFFTM
                     ALGAFVFSERLQRKQLAGIALAIIGVLVLIEASLNGQHIAMSGFMLTLAAAFSWACGN
                     IFNKKIMQHSPRPAVMSLVVWSALIPILPFLLSSLLLEGADHITQSLITIDMTTILSL
                     LYLAFVATILGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAAVLLGETLTGMQLAGA
                     VLIMAGLYINVFGFRVRRTARVRG"
     gene            50028..51215
                     /gene="ydeE"
                     /locus_tag="MOX77_000329"
     CDS             50028..51215
                     /gene="ydeE"
                     /locus_tag="MOX77_000329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux MFS transporter YdeE"
                     /protein_id="HCA3355997.1"
                     /translation="MNPGLRRSTLALLASSLLLTIGRGATLPFMTIYLNRQYGLGVDL
                     IGYALTSALTIGVIFSLGFGILADKFDKKRYMLLAIIAFACGFIAIPMVHNVVLVVLL
                     FALINCAYSVFSTVLKAWFADNLTATTKTRIFSLNYTVLNIGWTVGPPLGTLLVMQSI
                     NLPFWLAAICSAFPLVFIQVWVTRSVAASEGKNAAIWSPSVLLRDKALLWFTLSAFLA
                     SFVGVAFASCISQYVMVVADSGFAEKVVAVVLPVNAVIVVSLQYAVGRRLTAVNIRPM
                     MTTGTVFFIAGLIGFIFSGDNLFFWGLSAAVFTIGEIIYAPGEYMLIDNIAPAGMKAS
                     YFSAQSLGWLGAAVNPLASGVILTTLPAWSLFVVLIIAIVFAWALMLKGMRITPTQQA
                     ITC"
     gene            51463..51558
                     /gene="mgtS"
                     /locus_tag="MOX77_000330"
     CDS             51463..51558
                     /gene="mgtS"
                     /locus_tag="MOX77_000330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein MgtS"
                     /protein_id="HCA3355998.1"
                     /translation="MLGSINLFIVVLGIILFSGFLAAWFSHKWDD"
     gene            complement(51906..52279)
                     /locus_tag="MOX77_000331"
                     /pseudo
     CDS             complement(51906..52279)
                     /locus_tag="MOX77_000331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460475.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YdeI family stress tolerance OB fold protein"
     gene            52706..53233
                     /locus_tag="MOX77_000332"
     CDS             52706..53233
                     /locus_tag="MOX77_000332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo-tetronate isomerase"
                     /protein_id="HCA3355999.1"
                     /translation="MRLEQHDIVTLDEAESVDSLTKKLGDLLVNQKLRLTSAESCPGG
                     KLASALCAAEDTPSFYGVGYVTFTDEAKAKILRVQRHSLAEHTAVSEAVVTEMAQGAK
                     DQAEVNISIAISGYGGPEGGEDGTPAGTVWFAWNINNTTFTSRQHFNGDCQEVLEKCV
                     RFALAELLFLLTKKA"
     gene            complement(53353..53535)
                     /locus_tag="MOX77_000333"
     CDS             complement(53353..53535)
                     /locus_tag="MOX77_000333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="general stress protein"
                     /protein_id="HCA3356000.1"
                     /translation="MAEHRGGSGNFAEDKEKASEAGRKGGQHSGGNFKNDPQRASEAG
                     KKGGQNSHSGGRKSGN"
     gene            complement(53880..55922)
                     /gene="dcp"
                     /locus_tag="MOX77_000334"
     CDS             complement(53880..55922)
                     /gene="dcp"
                     /locus_tag="MOX77_000334"
                     /EC_number="3.4.15.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000106277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-dipeptidase Dcp"
                     /protein_id="HCA3356001.1"
                     /translation="MSTNPLLDQSMLPYQAPRFDRIKDCHYRPAFDEGVRQKRVEIEA
                     IVNHPAAPDFTNTLLALEQSGALLSRVTSVFFAMTAAHTNDELQRLDEAFSAELAALS
                     NDIYLNSALFARVDAVWQQRHSLGLDDESLRLVDVIHQRFVLAGAQLAEEDKARLKVL
                     NTESATLMSQFNQRLLAASKAGGLAVDDAHCLEGLSPEEMTVAAEAAREKGLEERWFI
                     PLLNTTQQPALATLRDRQTRENLFAASWTRAEKGDAHDTRAIVQRLVEIRRCQAKLLG
                     FPNYAAWKMADQMAKTPQAALSFMRGIVPPARQRVLNEQAEIQNVIDGEQGGYTVQAW
                     DWMFYAEQVRREKYALDEAQLKPYFALNTVLQEGVFWTANQLFGITFVERFDIPVYHP
                     DVRVWEIFDSDGVGMALFYGDFFARDSKSGGAWMGNFVEQSTLNETRPVIYNVCNYQK
                     PVDGQPALLLWDDVITLFHEFGHTLHGLFAVQRYATLSGTNTPRDFVEFPSQINEHWA
                     SHPRVFERYARHVDSGEKMPADLQERMRKASLFNKGYDMTELFGAALLDMRWHMLEES
                     VAEQSVAEFEQQALAAEHLDLPAVPPRYRSSYFAHIFGGGYAAGYYAYLWTQMLADDG
                     YQWFVEQGGLTRENGQRFRDAILSRGNSTDLETLYSAWRGHEPHIDTILQYRGLDH"
     gene            56061..56807
                     /gene="ydfG"
                     /locus_tag="MOX77_000335"
     CDS             56061..56807
                     /gene="ydfG"
                     /locus_tag="MOX77_000335"
                     /EC_number="1.1.1.298"
                     /EC_number="1.1.1.381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional NADP-dependent 3-hydroxy acid
                     dehydrogenase/3-hydroxypropionate dehydrogenase YdfG"
                     /protein_id="HCA3356002.1"
                     /translation="MIVLVTGATAGFGECIARRFVENGHKVIATGRRHERLQALKDEL
                     GENVLTAQLDVRNRAAIEEMMASLPAQWRDIDVLVNNAGLALGLEPAHKASVEDWETM
                     IDTNNKGLIYMTRAVLPGMVERNRGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLN
                     LRTDLHGTAVRVTDIEPGLVGGTEFSSVRFKGDDEKAGKTYENTTALTPEDITEAVWW
                     VATLPAHVNINTVEMMPVTQSFAGLSVHRS"
     gene            56937..57623
                     /locus_tag="MOX77_000336"
     CDS             56937..57623
                     /locus_tag="MOX77_000336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HCA3356003.1"
                     /translation="MTVETQLNPTQPVNQQIYRILRRDIVHCLIPPGTPLSEKEVSTR
                     FNVSRQPVREAFIKLAENGLIQIRPQRGSYVNKISLSQVQNGCFVRQAIECAVVRRAA
                     AMITDNQCYQLAQNLHLQHIAIERKQIDDFFQLDDDFHQKLAQIADCQLAWDTIENIK
                     ATIDRVRYMSLDHVSPPEMLLRQHHDIFSALENRDGNAVESAMTQHLQEISESVQLIR
                     QENSGWFSEE"
     gene            57804..58007
                     /gene="ydfZ"
                     /locus_tag="MOX77_000337"
     CDS             57804..58007
                     /gene="ydfZ"
                     /locus_tag="MOX77_000337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative selenium delivery protein YdfZ"
                     /protein_id="HCA3356004.1"
                     /translation="MMTYDRNRNAITTGSRVMISGTGHTGIIKAIESEGLDAGQIRRG
                     KTVIVEGCEGKFAPVELIRLGMN"
     gene            complement(58074..59540)
                     /locus_tag="MOX77_000338"
                     /pseudo
     CDS             complement(58074..59540)
                     /locus_tag="MOX77_000338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460468.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="mannitol dehydrogenase family protein"
     gene            complement(59684..61063)
                     /locus_tag="MOX77_000339"
     CDS             complement(59684..61063)
                     /locus_tag="MOX77_000339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012210164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MHS family MFS transporter"
                     /protein_id="HCA3356005.1"
                     /translation="MTQIKHERSTQDLVRAAVSGWLGTALEFMDFQLYSLGAALVFHE
                     IFFPEQSAAMALILAMGTYGAGYIARIIGAFVFGKMGDRIGRKKVLFITITMMGICTT
                     LIGVLPTYAQIGIFAPVLLVTLRIIQGLGAGAEISGAGTMLAEYAPKGKRGIISSLVA
                     MGTNCGTLSATAIWAVMFFALEREQLIAWGWRIPFLASVVVMIFAIWLRMNLKESPVF
                     EKVSEGEKSPALTPASENTLGAMFTSKSFWLATGLRFGQAGNSGLIQTFLAGYLVQTL
                     LFNKSIPTDALMISSVIGFITIPLLGWLSDKYGRRLPYIILNISAIILAWPMLSIVVD
                     KTYSPGVIMAALIVIHNFAVLGLFALENITMAEIFGSRNRFTRMAISKEAGGLVAVGF
                     GPVLAGIFCNMTDSWLPILIMLVLYSCIGLISALLMPEVRDRDLSLPEDAAEATAAEK
                     LRHSATQTS"
     gene            complement(61117..61980)
                     /locus_tag="MOX77_000340"
     CDS             complement(61117..61980)
                     /locus_tag="MOX77_000340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn-dependent oxidoreductase"
                     /protein_id="HCA3356006.1"
                     /translation="MKSIVIEKPNTLTIETRALLQPASGEVRIKVKLAGICGSDSHIY
                     RGHNPFAKYPRVIGHEFFGVIDAVGDNVNRDRIGERVSVDPVISCGHCYPCSVGKPNV
                     CTSLVVLGVHRDGGFSEYAVAPARNAHRIPDNIADHHAVMVEPFTIAANVTGQVNPTE
                     QDVALIYGAGPMGLTTVQALKGVYQVKTVIVVDRIEESPAARIVLMGFSSDPCEIVQQ
                     GITGKELAIYSSRLNANKFPVVIDWLNKGLIDPDKLITHTFDYQHVTDAIELFEKDQR
                     QCCKVLLTFAK"
     gene            complement(61991..63205)
                     /gene="rspA"
                     /locus_tag="MOX77_000341"
     CDS             complement(61991..63205)
                     /gene="rspA"
                     /locus_tag="MOX77_000341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001625315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="starvation-sensing protein RspA"
                     /protein_id="HCA3356007.1"
                     /translation="MKIVGAEVFVTCPGRNFVTLKITTEDGITGLGDATLNGRELSVA
                     SYLTDHLCPQLIGRDAHRIEDIWQFFYKGAYWRRGPVTMSAISAVDMALWDIKAKAAN
                     MPLYQLLGGASREGVMVYCHTTGHTIDDVLEDYARHKEQGFKAIRVQCGVPGMKTTYG
                     MAKGKGLAYEPATKGQWPEEQLWSTEKYLDFTPKLFDAVRNTFGFNEHLLHDMHHRLT
                     PIEAARFGKCIEDYRLFWMEDPTPAENQECFRLIRQHTVTPIAVGEVFNSIWDCKQLI
                     EEQLIDYIRTTITHAGGITGMRRIADFASLYQVRTGSHGPSDLSPVCMAAALHFDLWV
                     PNFGVQEFMGYSEQMLEVFPHNWTFEGGYMHPGDKPGLGIEFNEKLAAKYPYDPAYLP
                     VARLEDGTLWNW"
     gene            complement(63327..63653)
                     /locus_tag="MOX77_000342"
     CDS             complement(63327..63653)
                     /locus_tag="MOX77_000342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YnfA family protein"
                     /protein_id="HCA3356008.1"
                     /translation="MLKTTLLFFVTALCEIIGCFLPWLWIKRGASVWWLLPAAASLAL
                     FVWLLTLHPAASGRVYAAYGGVYVCTALLWLRVVDGVRLTVYDWSGALIALCGMLIIV
                     VGWGRT"
     gene            63806..64147
                     /locus_tag="MOX77_000343"
     CDS             63806..64147
                     /locus_tag="MOX77_000343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1283 family protein"
                     /protein_id="HCA3356009.1"
                     /translation="MNNTLSKRLCLTAMLTLAAVVYTTSAFAETSKLVIESGDSAQSR
                     QEAAMEKEQWNDTRSLRQKVNTRAEKEWDKADAAFDNRDKCEQSANINAYWEPNTLRC
                     LDRRTGRVITP"
     gene            64183..64743
                     /gene="speG"
                     /locus_tag="MOX77_000344"
     CDS             64183..64743
                     /gene="speG"
                     /locus_tag="MOX77_000344"
                     /EC_number="2.3.1.57"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine N1-acetyltransferase"
                     /protein_id="HCA3356010.1"
                     /translation="MTSDYKVRLRPLEREDLRFVHQLDNNASVMRYWFEEPYEAFVEL
                     SDLYDKHIHDQSERRFVVECDGENAGLVELVEINHVHRRAEFQIIISPEYQGKGLASR
                     AAKLAMDYGFTVLNLYKLYLIVDKENEKAIHIYRKLGFRVEGELIHEFFINGEYRNTI
                     RMCIFQQQYLDEHKTSSSTLLKPTAQ"
     gene            complement(64784..65494)
                     /locus_tag="MOX77_000345"
     CDS             complement(64784..65494)
                     /locus_tag="MOX77_000345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017465701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YnfC family lipoprotein"
                     /protein_id="HCA3356011.1"
                     /translation="MKKPLLLTLLCMILAGCDNPKSPESFTPEMASFSNEFDFDPLRG
                     PVKDFSQTLMSENGEVAKQVTGTLSQEGCFDTLELHDLENNTGLALVLDANYYRDAQT
                     LEKKVQLQGKCQLAALPSAGVTWETDDNGFVVSATGKEMKVEYRYDSEGYPLGKTTIN
                     SQNTLSVTAKLSTDSRKKLDYTAVSRVDDRQVGNVTQSCEYDAYANPVDCRLVIVDES
                     VKPAVSHHYTIKNRIDYY"
     gene            65598..65907
                     /locus_tag="MOX77_000346"
                     /pseudo
     CDS             65598..65907
                     /locus_tag="MOX77_000346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460460.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1161 domain-containing protein"
     gene            66061..68502
                     /locus_tag="MOX77_000347"
     CDS             66061..68502
                     /locus_tag="MOX77_000347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dimethyl sulfoxide reductase subunit A"
                     /protein_id="HCA3356012.1"
                     /translation="MMPGEKQQTGVSRRTLVKSAALGSLALAAGGVSLPFGMRTAAAA
                     VQQAMRNEEDKIVWGACSVNCGSRCALRLHVKDNEVWWVETDNTGDDVYGNHQVRACL
                     RGRSIRRRINHPDRLNYPMKRVGRRGEGKFERISWQEALDTISASLKKTVEIYGNEAV
                     YIHYSSGIVGGNITRSSPSASPVKRLMNCYGGSLNQYGSYSTAQISCAMPYTYGSNDG
                     NSTSDIENSKLVVMFGNNPAETRMSGGGITWFLEQARERSNARMIVIDPRYTDTAAGR
                     EDEWIPIRPGTDAALVAGIAWVLINENLVDQPFLDNYCIGYDEKTLPADAPPNGHYKA
                     YILGQGEDGIAKTPQWASHITGIPADRIIKLAREIGSVKPAYICQGWGPQRQANGEQT
                     ARAIAMFPILTGNVGIHGGNGGARESTYTITIERLPVLENPVKTAISCFSWTDAIARG
                     PEMTALRDGVRGKDKLDVPIKFLWNYAGNTLINQHSDINKTHEILQDEAKCEMIVVID
                     NFMTSSAKYADILLPDLMTVEQEDIIPNDYAGNMGYLIFIQPATTPKFERKPIYWVLS
                     EIARRLGDDVYQRFTEGRTQAQWLQYLYAKMQARDPALPAYDELKKMGIYKRKDPNGH
                     FVAYKKFREDPQANPLKTPSGKIEIYSSKLAHIASTWELAEGDVISPLPIYTPTFEGW
                     DDPKRSTFPLQLFGFHYKSRTHSSYGNIDVLQAACRQEVWINPLDAQKRGIANGDKVR
                     VFNDRGEVRLPAKVTPRILPGVSAMGQGAWHNADMAGDKIDHGACINTLTTLRPSPLA
                     KGNPQHTNLVEIEKI"
     gene            68604..71039
                     /locus_tag="MOX77_000348"
     CDS             68604..71039
                     /locus_tag="MOX77_000348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dimethyl sulfoxide reductase subunit A"
                     /protein_id="HCA3356013.1"
                     /translation="MKITNPEALMAASISRRSLVKTSAIGSLALASSAFTLPFSRIAH
                     AAADLASGNMAEKAVWSSCTVNCGSRCLLRLHVKDDTVYWVESDTTGNDEYGNHQVRA
                     CLRGRSIRRRMNHPDRLKYPMKRVGKRGEGKFERISWDEALDTIGDNLKRILKDYGNE
                     AVHVLYGTGVDGGNITNSNVPYRLMNACGGYLSRYGSYSTAQISAAMSYMFGGNDGNS
                     PDDIANTKLVVMFGNNPAETRMSGGGVTYYVEQARERSNARMIVIDPRYNDTAAGRED
                     EWLPIRPGTDGALAAAIGWVLITEDLIDKPFLDKYCIGYDETTLPASAPRNAHYKAYI
                     LGQGEDGIAKTPQWAAQITSIPAEKIIQLAREIGSAKPAYICQGWGPQRHSNGEQTAR
                     AIAMLSVLTGNVGINGGNSGVREGTWDLGVEWFPMLENPVKTQISVFTWTDAIDHGAE
                     MTATRDGVRGKDKLDVPIKFLWCYASNTLINQHGDIAHTHEVLQDDSKCEMIVGIEHF
                     MTASAKYCDILLPDLMPTEQEDLISHESAGNMGYVILGQPATSPKFERKPIYWTLSEV
                     AKRLGPDVYQTFTEGRTQHEWVKYLHAKTKARNPEMPDYEEMKQTGIFKKKCPEEHYV
                     AFRSFREDPAANPLKTPSGKIEIYSERLATLANTWELKKDEIIHPLPAYTPGFDGWDD
                     PLRQRYPLQLTGFHYKARTHSSYGNIDVLQQACPQEIWINPIDAQARGIQHGDTVRVF
                     NQNGEMLIPAKVTPRILPGVTAIGQGAWLNADMFGDKVDRGGSINILTSHRPSPLAKG
                     NPSHSNLVQVEKA"
     gene            71050..71667
                     /gene="dmsB"
                     /locus_tag="MOX77_000349"
     CDS             71050..71667
                     /gene="dmsB"
                     /locus_tag="MOX77_000349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000213046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dimethylsulfoxide reductase subunit B"
                     /protein_id="HCA3356014.1"
                     /translation="MTTQYGFFIDSSRCTGCKTCELACKDYKDLTPDVSFRRIYEYAG
                     GDWQEDNGVWHQNVFAYYLSISCNHCEDPACTKVCPSGAMHKRDDGFVVVNEEVCIGC
                     RYCHMACPYGAPQYNAAKGHMTKCDGCYDRVAEGKKPICVESCPLRALDFGPIDELRK
                     KHGELAAVAPLPRTHFTKPNIVIKPNANSRPTGDTTGYLANPKEV"
     gene            71669..72523
                     /locus_tag="MOX77_000350"
     CDS             71669..72523
                     /locus_tag="MOX77_000350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dimethyl sulfoxide reductase anchor subunit
                     family protein"
                     /protein_id="HCA3356015.1"
                     /translation="MGSGWHEWPLVLFTVLGQCVAGALIVSGYGWLTTKDDVAKQRIV
                     RSMFFLWLVMGLGFLASIMHLGLPMRAFNSLNRVGASALSNEIAAGSVFFAVGGIWWL
                     VAVLGKMPPALGKVWLLVSMALGVAFIWAMTLVYQIDTVPTWYNGYTTLAFFLTAFLC
                     GPVFAALLLRIARVPFCSVTFASISGLALVVCVAVIVLQGLSLSAIHSSVQQASHLAP
                     DYGMLQVWRIVLLAAGLGCWLCPLIRRREPHTVGLLLGVVLVLAGEIIGRGLFYGLHM
                     TVGMAVAG"
     gene            72566..73180
                     /gene="dmsD"
                     /locus_tag="MOX77_000351"
     CDS             72566..73180
                     /gene="dmsD"
                     /locus_tag="MOX77_000351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tat proofreading chaperone DmsD"
                     /protein_id="HCA3356016.1"
                     /translation="MTTFLQRDDFAVTARVLGALFYYSPESHETAPLVQALLNDDWQA
                     QWPLDAEALAPVAAMFKTHSEESLPQAWQRLFIGPYALPSPPWGSVWLDRESVLFGDS
                     TLALRQWMRENGIQFEMQQNEPEDHFGALLLLAAWLAENGRHHECEQLLAWHLFPWSP
                     RFLDVFIDHAGHPFYQALGQLARLTLAQWQAQLIIPVAVKPLFR"
     gene            73485..74195
                     /gene="osmY"
                     /locus_tag="MOX77_000352"
     CDS             73485..74195
                     /gene="osmY"
                     /locus_tag="MOX77_000352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmoprotectant ABC transporter permease OsmY"
                     /protein_id="HCA3356017.1"
                     /translation="MHILTLKRVLGFTIVILLLLALFIWGIGLETLKARQVDLLYLGQ
                     RHLMLVFTSMFFALLVGIPSGILLSRPAAKGFAEYVMQIFNVGNTLPPLAVLALAMVI
                     IGIGDTPAIVALFLASLLPIVRNTYAGLCSVPASLIEAANGIGMTKWQRLRQVELPNA
                     WPVMLSGIRIATAINVGTAPLAFLIGASSYGELIFPGIYLNDFPTLILGATATALFAL
                     ILDTLLAWFGRRLSPHTV"
     gene            74224..75126
                     /gene="osmX"
                     /locus_tag="MOX77_000353"
     CDS             74224..75126
                     /gene="osmX"
                     /locus_tag="MOX77_000353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmoprotectant ABC transporter substrate-binding
                     protein OsmX"
                     /protein_id="HCA3356018.1"
                     /translation="MRFKKHLLGWLATTLLFSSQTQAAPLVLATKSFTEQHILSAMTV
                     QYLQKKGFQVQPQTNIAAVISRNAMVNKQIDITWEYTGTSLIIFNRIDKRMSPQETYD
                     TVKRLDAKLGLVWLKPADMNNTYAFAMQRKRAESENITTISQMVAKIEQVRQNDPDHN
                     WMLGLDLEFAGRSDGMKPLQQAYQMQLDRPQIRQMDPGLVYNAVRDGLVDAGLVYTTD
                     GRVKGFDLKVLEDDKGFFPSYAVTPVVRKEVLEANPGLDDALNTLSGLLNNDVISTLN
                     AQVDIEHRTPQQVAHQFLQDKGLL"
     gene            75136..75783
                     /gene="osmW"
                     /locus_tag="MOX77_000354"
     CDS             75136..75783
                     /gene="osmW"
                     /locus_tag="MOX77_000354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmoprotectant ABC transporter permease OsmW"
                     /protein_id="HCA3356019.1"
                     /translation="MDTIHYMLDNAGYLASLTFQHLWLVALAVGLAIIIGVPLGVLIV
                     RHKWLATPVLGAATLLLTIPSIALFGLMIPLFSLIGHGIGVLPAVTAVFLYSLLPIVR
                     NTHTALDSLPPGLREAGRGIGMTFWQRLRWVEIPMALPVIFGGIRTAVVMNIGVMAIA
                     AVIGAGGLGLLLLNGISGSDIRMLIAGALMICLLAIVLDWLLHRLQVVLAPKGIR"
     gene            75783..76931
                     /gene="osmV"
                     /locus_tag="MOX77_000355"
     CDS             75783..76931
                     /gene="osmV"
                     /locus_tag="MOX77_000355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmoprotectant ABC transporter ATP-binding
                     protein OsmV"
                     /protein_id="HCA3356020.1"
                     /translation="MIKLENLTKQFVQKKGQPLKAVDNVNLNVPEGEMCVLLGPSGCG
                     KTTTLKMINRLIAPSSGNILINGENTNDMDTVTLRRNIGYVIQQIGLFPNMTIEENIT
                     VVPRMLGWDKARCKQRAEELMDMVALDARKFLHRYPKEMSGGQQQRIGVIRALAADPP
                     VLLMDEPFGAVDPINREVIQNQFLDMQRKLKKTVMLVSHDIDEALKLGDRIAVFRQGR
                     IVQCASPDELLAKPANEFVGSFVGQDRTLKRLLLVSAGDVTDQQPTITARPSMPLSEA
                     FGIMDDHDIRAITVIDNDGKPLGFVKRREARNASGICADITHPFRITGKAEDNLRIVL
                     SRLYESNTSWMPIVDEDGRYNGEISQDYIADYLSSGRTRRALNIHESS"
     gene            77067..>77322
                     /locus_tag="MOX77_000356"
     CDS             77067..>77322
                     /locus_tag="MOX77_000356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460450.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="voltage-gated ClC-type chloride channel ClcB"
                     /protein_id="HCA3356021.1"
                     /translation="MHRLHAYPDLRAMFRRLLIATLIGILAALAVAAFRHAMQLLEWI
                     FLSNDTGSLVNAAEGLSPWRRLITPALGGLAAGLLLWGWQK"
BASE COUNT        19244 a        19787 c        19090 g        19201 t
ORIGIN      
        1 ggcaaacccc tctgccagcg ccacgcgcat cgccgcttgc aggatcactt cgcggcgttc
       61 atcccggtta aggtaactca tattttcccc acattagcca atgcgcgcag tgtaacaaaa
      121 agctggacat tcgttcaact taccgtagga tcctgaaatt ggacaggtgt ccaggtttaa
      181 gtttttgaag ggagagttat gtttcgtcag tggttaacgt tagtcattat tgtgctggtc
      241 tatattcctg tcgccattga tgccacggtc ttgcatgtcg ccgcgccgac actgagtatg
      301 acactggggg ccagcggcaa cgagctgctg tggatcattg atatttattc tttggtcatg
      361 gctggcatgg tgttgccgat gggcgcgctt ggcgatcgta tcggttttaa acgcctgctg
      421 atgctgggcg ggacgctctt tggcctggca tcactggcgg cggcgttttc gcataccgcc
      481 agttggctta tcgccaccag ggtattactg gctattggcg cggcgatgat tgtatcggcg
      541 acgctggccg ggatacgcgc caccttttgt gaagagaagc atcgcaacat ggcgctgggc
      601 gtctgggctg cggtaggttc gggcggagcg gcgtttgggc cgctcatcgg cggcatatta
      661 ttagagcatt tttactgggg atcggttttc ctgatcaacg tgccgattgt gctggtcgtc
      721 atgggcttaa ccgcccgcta tgttcctcgt caggcgggcc gtcgcgatca accgctcaat
      781 cttggccatg cggtgatgct gattattgcc attttgctgt tggtctatag cgctaaaacc
      841 gcgctgaaag ggaatttgtc gctgtgggtc atctcgctta ccctgcttac cggcgcgttg
      901 ctactgggac tctttatccg cacacagctt gcgacatcgc gtccgatgat tgatatgcga
      961 ctatttaccc atcgcattat cctgagcggc gtcgtgatgg cgatgaccgc gatgatcact
     1021 ctggtgggtt ttgagctgct gatggcgcaa gagctacagt ttgttcacgg gctatcgcct
     1081 tatgaggccg gggtatttat gctgccggtg atggtcgcca gtggattcag cgggccgatt
     1141 gcgggcgcgc tggtctcgcg tctggggtta cggctggtcg cgacgggcgg catggcgtta
     1201 agcgcgctga gtttttatgg tctggcgatg acggatttca gcacccaaca atggcaggcc
     1261 tgggggctga tggcgctgct gggatttagc accgccagcg cattgctggc ttccacgtcg
     1321 gcaattatgg ccgctgtgcc ggcagaaaaa gcggcggcgg ccggcgcgat agaaacgatg
     1381 gcttatgaac tgggcgcggg actgggcatc gccattttcg gcctgttgtt aagccgtagc
     1441 ttctccgcgt ctatccgtct gcctgccggg cttgaggcgc aagagattgc cagagcgtca
     1501 tcttcaatgg gagaagccgt gcagttggcg aatagcctgc cgcccacgca ggggcaggca
     1561 atactggacg ccgccagaca cgcctttatc tggtcgcata gcgtggcgtt aagcagcgcc
     1621 gggagtatgc ttcttttgct ggcggtaggg atgtggttca gcctggcaaa agcccaacgc
     1681 cgataacata acgcctgatg agataagcgc ttaatgcgct agctggcagg gggagtctat
     1741 ttcctcaacc tctttaccgc tgaggcgtgc gtattgcccc gtcagtcgcc agaaggcagg
     1801 ctgggtttcg gtataaattt ccgcagccag aatcagccga cggcgatcaa cttcgttcag
     1861 ttccagtaag gtccagggaa aaatagcgat cggtatcggt aagccgaaac cacagcggac
     1921 acccgcagcc agaacagaag tagcgttcgc cgcgcgaaga ggatgaaaag tatggcggtt
     1981 ccggggaaag gggggctagc tgtggttgcc cgcaggcttc cagatacatg gctattccac
     2041 ccgaccattt ttgacacagc gtacaatggc aggcatagac atccagcatt tcgacgtcaa
     2101 cggtaaaatg gctttgtccg caaagacaac gaccagtgaa cgtctgcacg gcatactcct
     2161 tatgaccgag tctacatcaa gagaaaaagc cagccctgaa aggactgatg gtgatgggcg
     2221 gcaatgccgc agaagcgcat ccggtgggtt tccgctgggc gatggaagcg aaaaataata
     2281 acgatgcgac gctgattgtc gttgatccac gctttacgcg tacggcgtcg gtggcggata
     2341 tctatgcgcc aatacgttcc ggtacagaca ttacctttct gtccggcgtt ttgctgtacc
     2401 tgatcgaaaa taacaaaatc aacgctgaat acgttaagca ttacaccaac gccagcctgc
     2461 tggtgcggga agactttacg ttcgaagacg gtcttttcag cggctatgac gcccaaaagc
     2521 gtcagtacga taaatcctcc tggaactacc agttcgatga aaacggctat gccaaacgtg
     2581 atgaaacgtt gacgcaccca cgctgtgtgt ggaatctgct gaagcagcac gtttcgcgct
     2641 atacgccgga cgtcgtggaa aacatctgcg gtacgccgaa agcggacttc ctgaaggtgt
     2701 gtgaggtgtt ggcctctacc agcgcgccgg atcgcactac gaccttcctg tatgcgctgg
     2761 gctggacgca acataccgtc ggggcgcaga acatccgtac tatggcgatg atccagttgc
     2821 tgctcggcaa tatggggatg gctggcggcg gtgtgaacgc cttgcgcggc cactctaata
     2881 ttcagggctt aacggattta ggactgctct ccaccagcct gccgggctac ctgacgctac
     2941 cgtcagaaaa acaggccgat ctgcaaactt atctggccgc gaataccccc aaagcgacgc
     3001 tggccgatca ggtcaactac tgggggaatt atcctaagtt cttcgtcagc ctgatgaaat
     3061 ctttctatgg cgatgcggcg cagaaagaga atgactgggg ctttgcctgg ctgcctaagt
     3121 gggatcagtc ctatgatgtg atcaaatatt tcaacatgat ggatagcggg aaagttaccg
     3181 gctatttctg tcagggcttt aacccggtgg cgtccttccc ggacaaaaac aaagtggtgc
     3241 aaagcttaag caaactgaag tatctggtcg ttatcgatcc gctggtgact gaaacgtcaa
     3301 cgttctggca gaaccacagc aaatcgttta acgacggaaa tcgatgacca tacggccacg
     3361 aatttgtccc tgttccatct ctttaaaaat aacgttgata tcttcaagcg gacgtaaagc
     3421 gacttttggc acgacttttc cttccgccgc gaactggaag gcttcggtca gatcctggcg
     3481 tgtccccacc aacgaaccga caacctgaat gccatccagc accaggcgag ggatatcaag
     3541 gttcatggct tctggcggca gcccgactgc caccacgcgg cctccggcgc gaacggcatc
     3601 tactgcggaa ttaaacgccg ccttagcgac cgcggtaacc accgctgcgt gcgcgccacc
     3661 ggttttttcc tgcacaattt tagccgcatc ttccgtacgt gaattaatgg tcagatctgc
     3721 gcccatttcc tcggccagtt tcagttgccc atcattgaca tcaatggcga tcactttcgc
     3781 attgaaaacg tttttcgcgt actgcaaggc cagattaccc agaccgccca gaccgtagat
     3841 ggcaatccac tggccaggtt taatatgaga aatcttcacc gctttatagg tggtaacgcc
     3901 cgcgcaggta atactacttg ccgccgcaga gtccaggcct tccggtactt tcaccgcata
     3961 atccgcgacg acaatacact cttcggccat gccgccatct accgtgtaac cggcattttt
     4021 cacgttgcgg cataaggttt cattgcccgt attgcaatac tcacagtgtc cgcatccttc
     4081 ataaaaccac gcgacactcg cgcgatcgcc gggtttcagc gaggtgacac caggaccgac
     4141 ttccgccacg acgccaatgc cttcgtgtcc cagaataacg ccggttttgt caccgaaatc
     4201 tccgtttttc acgtgtagat cggtatggca tacaccgcag cactccattt ttagcaaagc
     4261 ttcaccgtgg cgaaggggac gcagcgtttt ctcagtaaca tcaacctgat gatcttgtgt
     4321 gacaacagca gctttcataa ccttctcctt ttcttaatag tgaactgcat agcaggtaat
     4381 agcaggtaag gtgctattac ctctttagga ttaatatttc tgatgagtta tgcaaggcgg
     4441 cagaaataca atgtaatagt ttagccagga ttatcctgat aaatcctcgt tcaatacata
     4501 aaggtggcta atattagtag cttgacaaat aagcagggaa aggaattcag gtgtgtcgac
     4561 agactcacca aaactaaaga agaaagtgat atccggcggc attcaccgcc gggtacgtat
     4621 taaatggaag tccgacggta gtcgcggtat tccggtttcc agaagttatc gtcaatcgcc
     4681 tgttgcagcg cttccgcaga ggttttcacc gctacgcctt gttgctgcgc cattttgcct
     4741 acggcaaaag cgatagcgcg cgacacgacc tggatgtctt taagcgctgg taacactaat
     4801 ccttcgccgt tattcaccag cggagaatgt ttcgccagcg tctcactggc tgacatcagc
     4861 atttcatcag taatgcgcga tgcgccggaa gcgataaccc caagtccgat gccggggaaa
     4921 atataggcgt tattacattg tgcgatcgga taaaccttat ctttccagat gaccggcgag
     4981 aatgggctgc cggttgccac cagcgcgttg ccttccgtcc aggcgataat gtcctgtggc
     5041 gtggcctcca cgcgagaggt gggattagag agcggcatga cgatcgggcg agggcaatgc
     5101 ttatgcatct cgcggatgat ctcttcagta aagagcccgg tctggccgga aaccccgatc
     5161 aggatatccg gcttcacgtt acgcaccaca tccagcagcg acagcacgtc attttcggta
     5221 tcccagtgct ggagattgtc gcatttctgc accagttttg cctggaacgg caataaatta
     5281 ggcatccggt ccgtcaacag gccgaagcga tcgaccataa aaacgttctg tcgagcggca
     5341 tcttcgctta aaccttcacg ctgagtctgc gcgatgatct gttcagcaat cccacatccg
     5401 gctgaacccg cgccgaggaa aacgattttc tgctcgctaa gctgactgcc ggcagcgcgg
     5461 ctggcggcga tcaacgtacc gacggtcacg gctgcggtgc cctgaatatc atcgttaaag
     5521 gagcaaatct catcacgata gcgcgtcaac agcggcattg cgtttttctg cgcgaaatct
     5581 tcgaactgta gcaggatatc tggccagcgc tgcttaacgg cctgaataaa ctcatcgaca
     5641 aacgcataat actcatcgtc ggtaatgcgc ggatgacgcc agcccatgta gagcggatcg
     5701 ttgagtaact gttgattgtt ggtgccgaca tccagcacaa cgggaagggt ataggccgga
     5761 ctaatgccgc cgcaggcggt gtataatgac agcttaccga taggtatccc cattccgccg
     5821 atgccctgat cgccaagccc cagaatccgc tcgccatccg tcaccacaat aactttaatg
     5881 ttgtggttag gcacattctg caaaatgtcg tccatattgt gacggttcgg ataagagata
     5941 aatacgccgc gcgcccggcg ataaatctca gagaagcgct cacaggccgc gcccacggtc
     6001 ggggtataga taaccggcat catctcttca agatggtttt gcaccagtcg ataaaagagc
     6061 gtttcgttgg tatcctggat gttacgcagg taaatatgct tatcgatttc tgttttaaac
     6121 ccctgatact ggagccaggc gcgttcggcc tgttcttcaa tcgactcgac gacctccggc
     6181 agcagtcctg acaaattgaa gttgcggcgc tcttctacgc taaaagcgct gcctttgttt
     6241 aacaggggga attccagcaa tacagggcca gcgtaaggga tataaaggga acgtgctttc
     6301 ttggttgtag tttccatgtt gctcactctt tttcgaataa ctgtccctgg caccgtcgtt
     6361 tatcatcata tattgccttc caccagggaa ccgaccctga gtataaagca ttgtgagacg
     6421 ttaaggtcat tcctataaac aaaaacacca ttgcagatgc aatggtgttt aacgtcattt
     6481 caggactgta cgattacttt tggctatcgg cgcgacgctt tctgccggtt gggttattca
     6541 ccacgctgct ggtgtcgcct tcagtaacaa ccttacgctg gttggaaatt ctgtaatcca
     6601 gtccaagtat atgacgagcc tgacggttcg atttcatgtt aactcctcaa tcctgttgct
     6661 agttttaagg acaaattcgc ttacgcgaaa gaaacgtaac ccctaaggtt gccgatacag
     6721 catagcaggt tttacagagt cgggtgctgc ccgcttacca catagttgat ggtctgctgg
     6781 tagatgtcac tgaggatgtc attgtcggaa gcctcaaccc atttggtcag ctccattaaa
     6841 atatcatctt cagtgacaac gcctaactcc gcgcgtaatc cttgttcaat cgcgttgacc
     6901 agggccggtt gtgctgctga ggtatttgct gagtgataag taaacatata atgcctccgt
     6961 gaacatgtat ttatttagta cggctcgcag aaaattaatt cgtattcagc atggcaaata
     7021 tttttgcggc tgtggttaag attagtcctg gagttatttt aacgcaaggc ggaactctaa
     7081 ttgtttaccc cagaagaaaa tatattatgt ttgccaatta catatcctca tacaaatagt
     7141 ggtcaattaa tatacattta aaatgctact tattgcgatt tttatcattt attacaacga
     7201 gataagataa atcttaatat gaatgaaaat atacataatg gaatacgctt ccggaagaaa
     7261 aagtaaggat aaaaggaggg atatattctt taaagaaagg gaggcctgtt ggtttaatat
     7321 ccatcactga aaaagcatac aactattttc tatatctgaa gtgcgggtaa tcgacaacat
     7381 gctacatcca tcggcatgaa caacgcagat tatcagcata gtctatactt tattttttga
     7441 gccaacagga gagcaaaaat gacaatccat aagaaaggtc aggcacactg ggaaggcgac
     7501 atcaaacggg gtaaaggtac tgtatcaaca gaaagcggcg tgcttaatca acaaccgtat
     7561 ggattcaata cccggttcga aggcgcgcag ggaaccaacc cggaagagtt aattggcgcc
     7621 gcacatgcgg cctgtttctc catggcgcta tcactcatgc tgggagaggc tggatttacg
     7681 ccgacatcca ttgacaccac cgctgacgta tcgcttgata aggtggaggc gggcttcgcc
     7741 attaccaaaa ttgcgctaca aagcaaagtg gcggtagcag atattgatgc ttcaactttc
     7801 gatcaaatca tccagaaagc aaaagccggg tgtccggtat cgcaggttct gaatgcggaa
     7861 atcaccctcg actaccagct taacgcctga taacctcgtc agcccggtaa cgactcttgt
     7921 ttatcgggct gttgaatatc gctttttctc cgtctctcat tttctttacg ctatcgggcg
     7981 ttaaaagtac acagatcgaa tgaaaatgta tcagacgtca ggaacctcga aaagcgtctt
     8041 cttaccgtgt ctttgttggt attcattaca ggtgttaatc attttctttg cagctccttt
     8101 taataaagaa agcattaaat catcataatc aacgtagaat ctggttgttt cggtttccgt
     8161 ttttatctcc ccaattgctg ctatttcagt ggctaatttc aattttgccg catcgatatc
     8221 tttattcgct tgtttcactg tagctgataa gctagtaaag aaattttgca ctgtttttag
     8281 cctgttattc aattctggaa tcaatttccc ttcaatcacg cccgcagcaa tagaatagga
     8341 aataattaat ccaaacggac cggcgactat gccggctgca gcaccggcat aagcttcctt
     8401 acgaattcta tccacctgtg actggaaata actacttttt tccgaaaaat cattagttaa
     8461 ctggctatct aatgccagca gttttccgga agcgttgttg aaactttgtg aacttgtcag
     8521 gagagatttt tgcgcttcat tcagtttctt gacaccatca tctaatatcc taatgagaat
     8581 gtctttctgg gctgatgctt ttttctcatt atattcatca aatagtaaaa tatacgctga
     8641 gagtaattgc gtcacgacac cacaccattc ataaacagtt tgtgtcgctt caaaatactt
     8701 gtcctggctg tccataagca aaactttaat atcaccaact aaaacagaag cttcctgcga
     8761 gtactcctgt ttaaaacggc ttaactcttt tatggtttca tcaaaggtct tccaggggat
     8821 gacctggtcg aggtatttgt tataaagatc taatgcccca tctgcggttt cgatcgcgct
     8881 tttaactacc tctacagttt gttctgcaaa tattccggtc ataatcattt gcctctttaa
     8941 atatataaat tgcaattaag tacctgtttt ataaagtatt cttacctatt acctccagac
     9001 aacttttgta gctttaacat tccagaagct ggaaatactg cctgcttcct gcttatctac
     9061 gcagggtacg attactctgc tgcattttct ccagaatacg accaaaagaa actgttttgc
     9121 ttcctacttt caccattcca tcttccggca agtagctaaa tttgacgtac agtatatttt
     9181 tgctgatttt atctttttgc ttcatagcca aaatggcttg ctgtaatgct tttaggtcgg
     9241 aggggattcc caccgcatcg gtgatatcgg taccgggcac aaatttcgat acctgatcaa
     9301 cagtttgagt caatatatcc tgtagcggaa ataagccggt aaaacgttgt ttgggtttat
     9361 attttgtcac tcccatataa atgtcaggta gacctttaat gtggttttca atgctgcgag
     9421 ttttattttg caacataaat tcgctaatct ctaccggaga gccgatcaat accagcggct
     9481 tcactcctgc acctttttcg gaaaagagat agttattgct gctgcttttt actgcttttt
     9541 gcaactcgcc acgatccatg attaagctgt aatatttacc ctctttcaca acaggtttgg
     9601 gttcacgcca catattgata tcgctagctt gtgccatact ggataccatc atgtaaccga
     9661 aaaacgccaa tgttacggat agtttcatta actttacctt tttaattagc caaaaaaaat
     9721 agcactcgta aaaagtataa agccgtggtt gcaacaaaac ttaaacgtcg ctcacttaac
     9781 cgataagcat ttatttatct taattatata aatttccctc caaataatac ctgaattatt
     9841 accctttgga ttcaactgct tgcagttata gtgctaaata acaataaatc tactggaagt
     9901 atacagtttg tgtgcaaaag gtatttttat gattacggaa acctgaaatt gtccgactat
     9961 ctgtaaatgc tatgaaattg tattgtagat tcgattgcgc ccggtgctga tgactaccgg
    10021 ggcaatagtg gttggtttag ccctgataag gttcgccagc ggtgtagaca ccgcaagccg
    10081 ttttggacag ggctggtggt tgcctccggg atgctgacag gcaatctgtt tacgatgttt
    10141 gttctgccca ccgtttgtgt ctggctggcg cgcgattgcg acggcatgtc agagcgaagt
    10201 tctctttcat cagctcaacg tagcgcatac tcgtcatttg ctgttgtcgt ggtctacttt
    10261 ttcgccctaa aatctgctcg ccatgttgct ttattcatca aacatcaaaa tcagtcaacg
    10321 taaatatcaa taatagccat atcacggagg gtgatcttta ttcctgagag aggtggggta
    10381 ttattttctg cgttctacat taacgggtta acgcgcagat gtagaggtta tttatataat
    10441 tattggagca acaacaatga ataaattctc ccttgctaca gcaggtatta tcgtggcagc
    10501 gctggtaacc agtgttagcg tgaatgcggc aacagatact actaaaacaa acgttacgcc
    10561 taaaggtatg agctgccagg agtttgttga cctcaatccg cagacgatgg cgccagtcgc
    10621 tttctgggtg ctgaatgaag atgaagattt taaaggcggg gactacgttg atttccagga
    10681 aactgagacg acagcagtgc cgctagccgt tgagctttgt aagaaaaacc cgcagagtga
    10741 attaagcaaa ataaaagacg aaatcaagaa agaactctca aaataagagt aaactgatat
    10801 caaaacccgg cctgtgtgtc gggttttact atttgtgaca ccgtcacaaa tagcatcttc
    10861 catttcttct accaatcacg tggtattgca ctattttcat tagagccctt tcactatatg
    10921 gagacctaat gaaaatttta ccgctggcac tctttatcat tccttttctg gccggatgcg
    10981 gcgccaataa tacgccgccg caaacgccta ttcccgggga aaaaacatct gccaaattac
    11041 gtaccctgga aacaggcgcg gcggctattc aatccagacc acctgtcgat gccatcagta
    11101 cctaccttga cgggttccat ttttatagcg gtgataaaaa cggacagatg gaagcgcacc
    11161 attacgttac cgtcctgaac gaagatgtca tgcaggcggt gatttacgac ggcaatacga
    11221 aaaacgcgcg cctgatgggg gtggagtaca ttatcagcga acgtttattt aaaacgcttc
    11281 ctcccgagga aaaaaaactg tggcacagcc accagtacga ggtgaaatcc ggtagcctgg
    11341 tggcgccagg cttaccgcag gtcgctgata aggcgttgat gagtaagatt gttaatactt
    11401 atggcaagac ctggcacacc tggcataccg accgggataa aaccctgcca atgggtatcc
    11461 ctgcgctgat gatgggcttt accggcgacg ggcagcttga ccccgcgctg ctggccgatc
    11521 gggatcgccg tctggggatt gatacccagg ccattaaacg cgagcggcag gatctgcctg
    11581 aacatcccgt tatcaagggg gctaacgcct gggagcaggg agaagttatc cagctacagc
    11641 gtgttcaggg ctctggcgaa cacgggcgag gcgataccgc gcacttcggt atatctgagc
    11701 aatcccgaca ataattccac ggttttacac gcagatagga aaaagaatgc ctgttaagtg
    11761 acagtgtcac gtaaaaatta gccccatagt ctatgcttgt ttttcggatg ctgtagaggt
    11821 tatgagttaa acggagcgac aaatgagttc aaaaattttt tgcaaaagct ggggggctga
    11881 atatatcgcc gctgatgtcg tccgctttcg tctttgggcc accggtcagc aaaaggttat
    11941 gctcaggctt gcgggtaaag accaggaaat gcaggcgagc ggtgacggct ggtttacgct
    12001 ggatgtatcc ggggtgacgc caggtacgga gtataacttt gtactcagcg atggcatggt
    12061 gctccccgat ccggcttccc gcgcccaaaa aactgacgtc aatggtccgt catatgtgat
    12121 tgatccaggc agctacgcgt ggcgcaacac cgggtggaaa ggcagccgtt gggagcaggc
    12181 cgtggtgtac gagatgcata caggcacgtt cactccggaa ggcaccttcc acaccgcaat
    12241 agcgaagctg ccttatctcg ctgaactcgg cgttaccgtt attgaagtga tgcccgttgc
    12301 gcaatttggc ggcgagcgcg gctggggcta tgacggcgta ctgctttacg cgccgcattc
    12361 tgcctatggg acgccggatg atttcaaagc gtttattgac accgcgcatg ggtatggtct
    12421 ttccgtcatc ctggatattg tgctgaacca tttcggcccg gagggaaatt atttaccgct
    12481 attggcgccg gcgtttttcc acaaagagcg catgacgccg tggggaaatg gtatcgccta
    12541 tgatgtcgac gccgtgcggc gctatatcat cgaggcgccg ttatactggc tgacagaata
    12601 ccatctcgac ggcttacgct ttgacgctat cgatcagatt gaggacagta gcgccaggca
    12661 tgtgctggtt gaaatcgcac aacgtattcg ggaagacatt accgacagac ccattcatct
    12721 gactaccgaa gatagccgca atattatttc tctgcatccc cgtgatcagg atggcaatgc
    12781 gccgctgttt accgccgaat ggaatgacga ttttcataat gccgtccacg tttttgcgac
    12841 cggagagacc caggcctact acaacgattt tgctgatgcc ccggaaaaac acctcgcaag
    12901 agcgctggcc gaaggattcg cttatcaggg ggaaatctca ccgcaaaccg gcgaacctcg
    12961 cggcgtaaaa agtaccggac aacccccggt cgcctttgtg gattttattc agaaccacga
    13021 tcaggtcggt aaccgcgccc agggcgacag actgataacc ctggcgggtg ctgaacgaac
    13081 aaaagtattg ctcgccacgt tgctgctttc accgcatatt cctctgcttt ttatgggcga
    13141 agagtatggc gaaagccgtc cttttctttt ttttaccgat ttccatgggg atttagcccg
    13201 cgccgttcgt gaaggtcgcg caaaagagtt tgccgatcat gcaggggaaa atgttccgga
    13261 cccgaatgcg ccagagacct ttcaacgctc aaaacttaac tggaagcaac agcacagtga
    13321 agagggtaaa gcgtggctgg catttacccg cgaactactg cttttgcgcc agaagcatat
    13381 cgtgccgctg ttgtccgctg cccgtgagag ctcaggaacg gtattgcaaa ccgcgcccgg
    13441 gtttattgcc gttagctggc gttttccggg aggaacactg tcactggcgc tgaatattag
    13501 cgccacgacg gtattgctgc ccgatttacc gggtaagact ctcttcgcct ggccgaatga
    13561 atccaccggg tcgctttccc aacattctct tattgtccgc ttagcccagg gagagtctgc
    13621 atcatgatcc caactgcaac gtatcgtctt cagtttcgca atagcatgac cttcgatcgc
    13681 gctgcggcgc tggtgcctta ccttaaaaat ctgggtatca gccatcttta tgcctcaccc
    13741 atctttaccg ccaccaaagc gtcaacgcat ggttatgatg tcaccgatgc gaatgagatt
    13801 gagccttcta ttggcgggcg cgaaggattt gaaagactgg tggctgaact taaagcacaa
    13861 ggtctgggat tgatcatcga tattgtgcct aatcacatgg ccagctcgct ggaaaacgcc
    13921 tggtggcgcg acgtgcttga atatggcaag gagagccgtt acgcgcgcca tttcgatatt
    13981 gactggtcgc gccgactgac gctgcctttt ttaggcgaca cgtttgacgc cgtgctggga
    14041 aacggagaaa ttgcgatcaa gccggatccc gttacgggta aacccacgtt cgcctattat
    14101 gataattatt atccgcttgc gccagcgacg tggcaggggc gcgaggctga aatactggcg
    14161 cttaccgata aagccgctat tgctgatttg catgagcgcc agccgtggaa attaatgtct
    14221 tggcgcgatg ccgctcgctc gctttcatat cggcgtttct ttgaggtcac agggctggtg
    14281 ggaatgcggg tggaagataa aatcgtcttc gacgatacac atcggctgat tctggagctg
    14341 gtcagaacgg gggcggttga cggtttacgt atcgatcata tcgacggcct tgccgatccg
    14401 aaagcctatc ttgcgcgttt acgtcaggaa gtgggaccgg cgtgctatat caccgtggaa
    14461 aaaattctcg ctaaaggcga gcaacttcct gatgactggc cggtttccgg caccacaggc
    14521 tatgaattca tcgcctcgct ggcggaagta ctggttgacg ataagcagat agacaatctg
    14581 cgccaggctt acgagaccgt aacaggcgcg ccagtggata tgcgggcgga attacgggcg
    14641 gctaaattgc tgatggtcga tcgcaatttt gagggggaat ttacccggct gctcgcgctt
    14701 gcgctgtcga ttgccagcga gctacagatc gcacaggaag agagcgtcgt tcggcaggcg
    14761 ttacgcgagt tattaattgc ctttcccgta tatcgcactt acggcacggc agaagggcta
    14821 ccgccgaccg atatttgcct gttacaccgt attgtggaac gggtaaagac gcttgaaaac
    14881 cctccgcagc cagaagcgct tacatttctg agccgtcttc ttaccggcga tgttcccgtc
    14941 tccagccagg aggaggcgac acagtttcgc gttcggttcc agcaactcac cggtccgctg
    15001 atggcgaaat cggtagagga tacgcttttc tttcgtcaaa acatgggact ggcgttaaat
    15061 gaagtcggcg ccgagcccgt cacgcatcac ttctccatcg aacgctttca ccatgagatg
    15121 aaaacccgac aggcgcgaca gcctgatgcg ttatccggta cgtcgaccca cgataccaag
    15181 cgaggcgagg atgcgcgagc acgcctgtat acgcttaccg aagcgccgga acagtggagc
    15241 gaatgccttg cccgctggcg gcagatgaac cagacccatg tcaaattttt gaatgatggc
    15301 actgcgccaa aatcggcgga tacgtggatg ctatatcagg cgctgaccgg cgtctggccc
    15361 ccgatgctac aaccacagga cgaaacaggt ttaaacgcgc tgaaaatacg ctttgaagcc
    15421 tttgtggaga aagcgctacg cgaagcgaag ctacgtaccg attgggtgga cagtaatgag
    15481 gcttacgaaa cggcaatgct tgattacgcc cgttatttac tggcgccgga taatcagaca
    15541 tttttgcagg atttttatcg ttccttgcaa cccttcatcc gcgcaggact ggttaacagc
    15601 ctgacgcaga ccgttatcaa attaaccgcg ccgggagtac ctgatatcta tcaggggagc
    15661 gaggcgttga attttagcct tgtcgatccc gacaaccgcc gcgaaccaga tttcgccacg
    15721 ctggcgcagc agttagacca actgacgccg ggagttttct cgcgcgaaga gagttggctg
    15781 gacgggcagg tgaatcagta tgccaccgcc gccttactgc gtttgcgtca gcagaatcat
    15841 gagctcttcc gttttggcga ctatataccg ctgcgggctg ttggtcagcg tgccgacaag
    15901 gtcatcgctt acgccagagt caatcatgat gatgcgctga ttgttgttgc gccccgactg
    15961 gtgttcgccg aatgtgacgg cttattatca caatcgcata gcggtttctg gtcaggaacc
    16021 gacattatta tacccggaca gcttaatcag cgtcgttatc gcaatgtgct tacccaggag
    16081 aggttaatgc ctggtgaacg cctgtcgttg gcctcacatc agggcggcgt actggtttta
    16141 atgagcgact gagtttatgt gttgatgtgc cgtgacagga caacgtttac cgtgggtgga
    16201 gaaagagaat gacaacaaac agggcttttg aaatcagatc aggatacagc catacgcttg
    16261 gcgcgaatta tgacggcgaa ggcgtgaatt tcgctatttt ttccgcccat gcggaacgcg
    16321 tcgagctttg tctttacgat ccgagtgggg agcatgaaat cgctcgtctg gagttaccgg
    16381 aatataccga cgaaatatgg cacggctatg tcacgaagtt gcagcccggc gcgctgtatg
    16441 ggtaccgcgt ttacggtcct tatgacccgg aaaatggtca tcgttttaac cccaataagc
    16501 tgcttattga cccttatgcc cgtgagctgg tgggcgatat tcagtggaac gatgcgcatt
    16561 tcgcgtatca attacttcat gacgataaag atttgacctt tgatgaccag gatagcgcgc
    16621 catttacgcc taaatgtcgg gtgattgatc cggctgaggc taactgggag gatagacaac
    16681 ggccttccat accgtggtcg aacgccatta tttatgaaac gcatgtaaaa ggctttaccc
    16741 agcttaattc ggcgatccct gagcctctac gcggtacgtt tgagggcatg gggcataaag
    16801 ccagcgtgga ttacattaaa agtctgggga ttacctccgt cgagctttta cccgttcact
    16861 ggttcccgga cgatcagcat ctgctcgata aaggactgaa aaatttctgg ggatataact
    16921 cgctgggctt ttttgcgccg gcgacgcgct actatggtcc aaaaggtatt cagggattcc
    16981 gcgatatggt gcgcgctttc catgatgccg gcgtcgaagt gatactggat gtggtctata
    17041 accatacggc agaagggaat gaacttggcc ccacgctgtc atttaaaggt atcgataact
    17101 tctcttacta tcgcaccatg cccgatcagc atcgctatta tattaacgat acagggacag
    17161 gtaataccgt caatacctct catccacggg tactgcaaat ggtgatggat tcgcttcgct
    17221 attgggcgga gtcaatgcat gtcgacggct ttcgttttga tttgggcacc attcttggtc
    17281 gtgagccgga aggctttgat cagagaggcg gcttttttga tgcggtaacg caagacccgg
    17341 tgctggcaaa actgaaactg attggcgaac cctgggatat cggaccgggc ggctatcagg
    17401 ttggcggttt tccaccaggg tggggcgaat ggaatgataa atatcgcgat acggttcgcg
    17461 aatactggaa aggtgacaac gtcacaaatg atttcgccgc acgcctgctg ggttccggcg
    17521 atctctacga tttgcgcggc cgtcgctcct ggtcaagcgt taactttatt actgcccatg
    17581 acggcttcac gctgaacgat ctggtgtctt ataacgacaa acataatgaa gccaatggcg
    17641 aagataataa tgacgggcat aatgataacc gctcctgtaa ctatggcgca gaagggccaa
    17701 ccgacgacga gggcatcaat gcgatacgcg agcgacagaa acgtaatttc ctgaccacct
    17761 tacttttctc acacggcacg ccgatgttat tagcgggcga tgagtttggc cgcagtcaga
    17821 tgggcaataa caatggctac tgtcaggaca gtgaaatatc gtgggtccac tgggataatt
    17881 tgccggaaac cgccaatgcg ctacgggagt ttacccgtca tctgattcaa ctgcgcgcca
    17941 cgcaaccgtt gctgcgccgg gagagctggc gtgacggtct ggagatccgc tggtttaacg
    18001 ccggcggagg ggcgcagtaa tccgaacaat gggatgaggg atcgacgata ggcgtatgta
    18061 ttagtcgacc cgatcttcag ccggaagcgg ggatctggca tgacgcctta ctgcttttca
    18121 atccgtttga aggcagcgta ccgttccgta ttccgatgtg gggagaaggc ggctgggtgc
    18181 ttgaactgac gactgccgat gacgcgcagc agggaatgcg gattaccgaa gaaatggatt
    18241 tcgatctggc cgggcgcagc atcgtgttat tcagacgccc ctgatagtga aactgcgctc
    18301 cggacccaac cggccttaat ggccggtttt ttactggcgc tcaggcgata tcatgccgca
    18361 gaaataacac cgttgtcagt ttaccgcccg aaaaattcat ccgcctgttg gtattccttt
    18421 gattgtcttc accgatattc gcttcaggcc gtctattgcc atttcaaggt aggtacgtgg
    18481 acatcccaga tttaaacgga taaatccgct gcccgccggg ccaaagccgc tgcccattga
    18541 aggagcaata cccgcgacat ccgccattac ccattttagc tgttcgtcat ccagtcccag
    18601 ttttttacaa tccatccata ataaataggt tccctgcgcc gggacaattc ttgcccaggg
    18661 aaggtgctct gtcgcctgtt caacaaacca gcggcggttt tccgccagat aatccagtag
    18721 cgaatccagc cactgtctgc tttcattcca tgcggtagtt gccgcctgaa cggagagggc
    18781 gttaaagaca tccagcccat gagcgtccag acgagacagg aaacgctggc gaagcgtagg
    18841 atcgggaatg agaaaattag aaattcgcaa cgacgataag ccaaacgttt tgctggccgc
    18901 agtggcggag atgacccgtt tatgccagcg ctcccctaaa tgcagtaccg aggtaaaggt
    18961 ttcgcagggc agcaatagat cggcccatat ttcatccgag atgagagtga catcataagc
    19021 ttcacataat aaaagcagtt gctccagctc gttggccgac cagcaacgcc cggttggatt
    19081 atgtggatta cacaaaatca ttagcggagg gcgctcatgg cgaaacagcc tttccagttg
    19141 gcaaaaatcc atctggtagc cttcatccgg cgactcgcta aggggattct ccagcagttt
    19201 tctaccatta agcgtgatta ttttggcgaa ggagccatag tatggcccct gaaccactac
    19261 gccgtcgcct ggatgcgtca acatttgcac taagagcgcc aaccctggta cgacgccttc
    19321 cacgctgcat acccattcct gttttaacgt gagctggtgg cgtgacgaaa accagtgaag
    19381 cagggcgtta aaataggcct catcacgttc gctatagcca aatacgccgt gctcgattcg
    19441 ctgatgcaat gccgcctgaa cctctggcgg gcaggcaaaa tcgaaatcag aaacccacat
    19501 cggcagcagt tttccagcgc cgtcgccaaa gtgacgctca aagttatcga ttattacttc
    19561 cgattcaacg gtttggttat aacatatcta atcatcttag atctctgggg atttattttg
    19621 atagcatcat aatggttgat ccattacatt ttccttctct tagctctctg cattcatttt
    19681 tgtcattgcc accagataat agttatgtcc gcatgcgcag attggtatta cttgaacatg
    19741 tttccaatct atttcgcgcc atcccattta tgactattga tgatgattat ccaatttttc
    19801 taatcgttcc tgaattactg gattttgata aagaacgcaa tcatgaacaa tctgccgctt
    19861 ttctaagtca gctctttttt aaagatagaa aaatggatta cgctacttat ttagcgtttc
    19921 ttgagcactt tgggagaaat gaagaaacat tccagaagat cctaataaat aaagaattat
    19981 taaaaacatt gcttgataat ttcaataaca tcgaaaaaga ggtctgggtt tacgatacag
    20041 atttaaagag ttttacaaca agagaggtag atcttctgga ttacgatctg ccgtcagcta
    20101 taggaacctt actgggtaag gttgaaggtg caatttatgc acagcgatca actcaattat
    20161 cggcaacact attaggtatt gatccggtta tttatagtaa ccatatgttt ttacatgaat
    20221 ggactacgga gcagttggtc aaggattatg gtaaattaaa tcctctttct tctgaagagc
    20281 aagcgattac aatgggacta tcagccgcgg aagtaaaatt ccttactgcg ctttccgatc
    20341 tggaattaaa aaagattaga gaaagaggtc aactggaatc cttaaggcat gaactaagaa
    20401 tctcaaggca tgacttgcaa ggaaaacgtg tgcaggataa gcgggtgcaa atcaacagaa
    20461 ttcgcgcagc gtcacggcag ggaagggatc aaacttatgg gccagaagtt ttttgacatg
    20521 cacgaatcca gccgccttaa catgtctttt aattgttctg gtgcatttaa cataatatac
    20581 attatgcgct ccatgatgat ggagaacgga aagcagcccc caagcgtgaa tcagtcatac
    20641 aaccagcgac cagccctggc agacgcaatg agcataccta tcgtgaactc cggcgcctga
    20701 ggaatatcgt ttttgcgaaa cggattaagc aaatgcttag caccacgcgg ttttgtccgc
    20761 gtaggcaaaa cattcaatcc agccacaata gacactatcg ccccaaaatc ctgaacaccc
    20821 aactgattgg cagtgttttc gcagaaaatc ataaacagca actgactagc agtcagattt
    20881 gaacgtccgg cataaaaata agtgctatta agctcttcaa ctgtatccat actctaattt
    20941 cctgattaaa ttaactttat gcattggcaa tgcaaccact ttataggatt gttataacac
    21001 atttgttcgt cgtgtgcttg aattagacaa tggcaagctg gtgcgcacgc tgttaacgtt
    21061 cctggtaatc gatacaagca gttaagtaca aaattaagcc gtgtggtgca ggatacagac
    21121 tggtctacag cgtcgaagat gaaattatca cggtaactgt cattggtgtt ggaaagcgtg
    21181 aaaatgatgc cgtctacaac ttaacgacgt gatggcggtg aaacaggaga tatttgccta
    21241 tcccccttat cctaactgga ccgctgttgg cgttacctgg ctggccggct ttgatttcga
    21301 aataaaggtt attgcccgaa tcccctgatg cttattctcg gtaaaaccgg tagcattatg
    21361 tgtaccggtt ttattttatt catccctgcc cttcatcctg tatgattaac atgcaatcac
    21421 caaacatatc gaactgacat gactggatat cttctgaggc ataggccttc atgagtagat
    21481 caaccccagc aaactgacca gttaacacca tatgcgtcgt ttttggctga tgtaagttcg
    21541 ttagcaggca gtcaaccact ttcagttgat agcctggatg tatataaagc gcagtccagc
    21601 cagaacttgc tttgaggcaa ttgtgttccc tcgaatacgc ggactccagg catcgtgtaa
    21661 cggtagttcc tacggcaaaa atacgtccgc cattttgctt cgcagtatta atgatatccg
    21721 ctgtagcttg tggaacctcg tagtattctt cgttgatagt cacttcctct acacattttg
    21781 tttgtatttt tctgttggac aacatttctg ttgatgcaac atgtaaagta ataaaagata
    21841 ttaacccacc tttatctttg attttttgga taagatccca ggtaaaatga atgccggcag
    21901 aaggtatttc caaagagcca tactttttag aaaaaacgga acggtaagca tctggatatt
    21961 tataaaacaa gctggagtcc acatactcat caagacgctc accatgactg gctaaatagc
    22021 aaattaaagc ctcatgattt tctacaacgg cccggtactg gctctcctcg ccaaaccttt
    22081 gctctatctt aatggaaatt tcagggttat caaccaaata gaaaacatca ttcgcgttaa
    22141 gcctttcttt taaaagtccg gaaataatta ctctattatt tagtaaaaat ccctctaaaa
    22201 caattttaat taatctattt cgtcttgttt tacagataaa catatggttt attatagtac
    22261 tgtcgttaaa acagattaca tcaccttctt tgatataatc tgttacttta ctaaagtcta
    22321 ccttatgaat ttccccttta cttcggttga ggacaagcat tttgcacttt tccctgtatg
    22381 aatcattggc tatccaatga ggtctgagtg ggatagtcat ctgatcggta atgcgaaaat
    22441 catatttttc ggtaagcata tatttaccct ttgaaaaacc attgatacgg cgattgttat
    22501 atagccgtat tctgcagtat acgttggcct ttcaaagggt gaaaattaac tcgataaatg
    22561 ttgttattat atttactttg ctggctattt aattaatgca gtagcatgga cgatcagatt
    22621 tgaccgccct tttcttttgc ttattccggc attgaagcat cgctatccat tgcatcggca
    22681 aacttttgca ttaaccgaac aaagatatca attttatcct gaggccagtc tttaaaaaca
    22741 acgttgccca tttgctctcg cgcagcgtct atacgctccg tcatcgcctt tcctgtccgg
    22801 gagataacgg cctcgcgtat acgacgatcg atgacattat gttgccgtat tatcaatccc
    22861 aacttctcca gtttggcgac ctgtcggctt accgtcgtat aatcacgacc ggcacgttcg
    22921 gctaactcaa caacgccaat cggccctaaa cgttcgatac taataaggat cgaaaatagc
    22981 gcgcgatcga gttgaatccc cgcctctgca attaatttct catcattacg aggccggttg
    23041 agcgcgctca ccacgcgaat caacgcaccg tgaagtgcct tcatttgctc ggaaatatgt
    23101 gtatcttgca catttttatt ttctgacata gcatgtctcc tcttatgtgc ataatacaca
    23161 tattggagag acgatgacaa catacaccac tacagatgta ctgatctgcg gcgctggcgt
    23221 taccgggctt actttagcca tcgaactggc gcgtcacggg gtctcatttc gcctgattga
    23281 gaaaagagcg acgcctttta ccggttcccg cgataaaggt attcagccgc gaacgcaaga
    23341 aatcttcgag gatattggga tactcaataa agtggtcgcc gccggcgggc tctatccccg
    23401 attacgaacc taccgtcatg acggaagcta cgtagattca gatattgcgc ataatacaaa
    23461 accgacccac gccgaaccct accatctgcc attgatggtt ccacagaacg tgacagaaac
    23521 gattatgcgg gagcaattaa aagcatgggg acatcgggtg gagttcggct gcgagttacg
    23581 acattttgcg caaaccccac gcacggtcac cgcgtatgtt gccgggccaa ctggagaaga
    23641 ggtcatcatc gcgcattatt tgataggcgc ggatggcggc ggaagctttg tcagaaagaa
    23701 attaggcgtc agcttccccg gccgtacgtt gggaatccat gcgcttgtgg ctgacgcttc
    23761 acttaccagg gatggaaaat ggcagcctcg ctacggggcg caggagaaga gcttctcgat
    23821 agctatgaac aggaacgccg cccggtagcc gaatcactgc tccacctttc tacccgatta
    23881 cttgactctc aaaaacaggg tggcatcaaa cgagaacgcg acgttcaaca acttgacatc
    23941 cagtatacca actccccctt agcccacacg ttgcccgaac gtcagcatgg gttacaagcg
    24001 ggagaaagag ctccggatgc tcctcttttg ggcgccggcg gccaatcatt acgattattt
    24061 cagttactcc agggtccgga ctggaatctg ttggcctacg aaacccacgg taaggtcatc
    24121 gatgcgcggc gaggtctgcg tattcatcac attggcgagc aggacgagct catcgatacc
    24181 ctggggcact tccgggagtc ctatcatctg gccccgggtc aatgcgtgct gatccgaccc
    24241 gatggctatg tcggcgcatt ctttcacggc aaacagagca acgatattga aaattatctc
    24301 tctcgttttg ccatagggat taaagatgaa tactaatgtc tatgagaaca ccgacagcga
    24361 aactatcacc ccgctcaaca agcggcgtat tttgcctgtt ttcctgcttg tcggccttta
    24421 cgccgccagt acagcggctg tgatgtcggt actgcctttt tatatccgcg agatgggcgg
    24481 ttcgccgctt atcattggaa tcatcatcgc cactgaggct tttagccaat tttgtgcagc
    24541 gcccctgatt ggccaccttt ccgatcgcgt tggccgcaag cgaatactga ttgtcacgct
    24601 ggctattgcg gcgataagtt tactattact cgccaacgcg caatgtatcc tgtttatcct
    24661 gctcgcccgc acgctttttg gcattagcgc cgggaatttg tcagccgccg cagcctatat
    24721 tgccgattgt acgcacgtca gaaatcggcg ccaggcaatc ggtatcctca caggctgcat
    24781 tggtttaggc ggtattgtcg gggcaggcgt ttccgggtgg ctatcgcgta tcagtctggg
    24841 tgcgccgatc tacgccgcct ttatacttgt ccttggggct gccctggtcg cgacttgggg
    24901 gttaaaagac ccttccacaa catcacgtac cacagataaa atagcgtcgt tctctgcccg
    24961 cgctatttta aagatgccag tccttcgcgt cttaatcatc gtaatgcttt gtcatttctt
    25021 cgcctatggc atgtactctt cacaattacc tgtttttctt tctgacacct tcatctggaa
    25081 tgggcttccc tttgggccaa aagcgttaag ctatctgtta atggcggacg gggttattaa
    25141 tattttcgtt cagctatttc tgttaggttg ggtgagccaa tatttttcgg agcgaaagct
    25201 aattatcctc atcttcgccc ttctttgtac tggatttctc actgcgggta tcgccacgac
    25261 cataccagtg cttatttttg ctatcgtttg tattagcatc gctgatgcgc tagccaaacc
    25321 cacttatctt gccgccttgt ccgtccatgt atcgcctgcc cgacaaggta tcgtcatcgg
    25381 aacggcgcag gcattaatcg caatcgctga ttttatatcc cccgtattgg gcggatttgt
    25441 cctgggttat gccctgtatg gcgtctggat cggtatagct atctctgtcg ccattattgg
    25501 tctggtgacg gcaatgattt acctttcaaa aagttcaccg ctaatagcga aaccagaaac
    25561 agaataatgt gacaacgtca caagcattat tactcccttc ttcccttatt tatcaaaagt
    25621 attgtactta tattgaatgt ttaagaggta tttatggaaa ttatgctggt tggcatttgc
    25681 ccttgtaaag cgcggggaaa gcatgaaaaa aatatatctc gttgttatcg tactgttttt
    25741 tatttctaca aaagtttata cactacttca taacaacatc ttcttttgtc gaaacagccc
    25801 ggagtgtgat ttgtctcatg ttctccccga ctaccgggag cagatttcag gcacaccgct
    25861 aaaatatacc ttaattagta cagctccatt agcacaggtg gtagtcagac actatgaatt
    25921 attatcgcaa cactggtcgc cagatgacat ggtaacccct gcgcaatggc gacataacgt
    25981 tgatatttat atccctgaaa cggcaaaaga gcaccatgct ttggtggttg taaacaacgg
    26041 aattaattat gaaaaaggca tacaaatccc cagtaaaccc gttgatttta ctcagcaaac
    26101 actggcaagc atcgcccgtg atacgaatac catcgtaata tcagtgagtg atatacctaa
    26161 ccaatattta acctttcagg atgataaaaa accactgaaa gaggacgaga gcgtttcccg
    26221 aagctgggca ttatttatgg aagcgccgga gcaacgtgag ttaatgcctt taaatattcc
    26281 tatggtcact gccatatcgc aagcgatgag attagcaaaa aaggagttaa cgcaatggaa
    26341 tataaattcc tttatcatta caggtatttc aaagcgtggg tggaccacct ggttgtcagc
    26401 tattgccgat cctgatgttg aagcaattgt tcccttcgcc attgatctac ttgatattga
    26461 tgcttcactt gagcatattt atcaatcata cggtggaaat tggcccatta cattctaccc
    26521 ctactaccag caaggcatag atgagaaaat aaaatccccc acatttaccc agctaaggca
    26581 aataatagat ccgttaagat atctcaatac tatttaccaa ccccgccttg caataccgaa
    26641 atatattatt aatgcaagtg gcgatgattt cttcgtacca gacaatactc gcttttatta
    26701 tagcaaactt cctggcgtaa aatcattacg tatagtgcct aatatgaacc actactcaat
    26761 taaccagttc gctgaaggaa gcctcgttcc atttattaac cggtttcaaa gtaaaaaaac
    26821 attaccgcag ttgatcggcc ttattcacca ccatcttctt acggtctatt tctcagaagc
    26881 gccggtaaaa gtcgttcgct ggacagccaa caatccaaat gcgcgtgatt tccgttatgc
    26941 ctgtggcatc cgctatcagc cgcttacaat agatattccc gccaacaata agatcagtat
    27001 tacgttaaat gaaccgaaga caggttggga agctacctat atcgaagcca cttttaatga
    27061 tggctatgtc gccacgagtc aggtttatat tacgcccgat gaaaaatacc cacagacagc
    27121 accaccttcc gttaacgccg catgtcaaac gttaccgggg cgtggattag gggaaaacga
    27181 tagccccgat tgaattttca agtaattgtc tgattttaaa taattttatc catcacgctt
    27241 gcgatggata aaaatcctct gcgataaatt tttgttatat tgatcacgtt ctaaccacaa
    27301 gataggtgat ttgaaaataa ccttaaaata ttgtggtcag gccgctagac cacaataaga
    27361 ggattaatca tgaaaagaaa aacaatggga tggcttatcg tttttcttct atttatagtt
    27421 tacatgctca actatatgga tcgttcagca ttgtcgataa ctgccccctt gatcgaaaag
    27481 gagttaggat ttaacgccgc ggagatggga atgatcttca gcgcattttt tatcggatac
    27541 gccctgttta attttattga tggctgggcc agcgataaag ttgggccaaa aacggttttt
    27601 ctcatcgcag cgttactatg gtctgtattt tgtggcttaa ctggtttagt caccggattg
    27661 tggacaatgc ttatcgtgcg cgttcttttc ggtatggctg aaggaccggt cagcgctgcc
    27721 ggaaataaaa tcatcaataa ctggatttcc cgaaaggagt ctgccacggc gatcggaatt
    27781 tttagcgccg gttccccgct cggcggcgcg gtgtccgggc cgattgtggg cctgttggcg
    27841 ttatccttag gctggcgccc cgcatttggc attattttct tatttggctt ggtctgggta
    27901 ctactgtggt actttatcgt tagcgataag ccaacaatga gtaaacgcct ggcgccggaa
    27961 gaacgcattg attttgaaaa tcatgaggac gttattttat ctgatgatgg ccgggctacg
    28021 ccttcactcg gctattacat gaaacaacca atggtatggg cgacaactct ggcttttttc
    28081 agctacaact atattctttt tttcttcctg acctggttcc caagttatct gaaccattcg
    28141 ttacatctcg atattaaaga aattagtatc gccacggtaa ttccctgggt catcggcgcc
    28201 attggtatgg tgctcggcgg cgtctgttct gatgtaattt atcggattac cggtaatgcc
    28261 ctgctctcac gtcgacttat tctgggcgta tgtctggcag gcgcggcggt atgtgttgcc
    28321 gtttccggta ccgttagcac tattggtagc gcaattacgc tcatgtcagt ttcactcttc
    28381 ctgctctatt taacaggccc aatttattgg gcggttattc aggatgttgt tcataaagat
    28441 aaggtaggga gcgtcggcgg agccatgcat ggcctggcta atatatccgg tattatcggt
    28501 ccgcttgtca ccggttttat cgttcaattt agcggtaaat atgactatgc gttctatctg
    28561 gctggtgcta tcgctatcgt ttcaagcctg ttggtcttcg tgtttgtaaa aagtaaagga
    28621 ttcaaagcca atgaaagtca aagctgtgtt cattaataag cctggtgaag ttgaaacccg
    28681 ctgggtggat tatccccata agaaagaaaa tgaagtatta attaaggttg atgccgcagg
    28741 catttgcgga tcggatatcg gggcttttcg tggaacgaac ccacttgtta cttacccaag
    28801 aattattggg catgaagtga ccggaattgt tcttcaggaa ggcaccggaa tgccggacaa
    28861 tattaaaaaa ggcgaccgcg tgattgttga cccctatatt tattgtggtc actgctaccc
    28921 ttgctctgtc ggcagaacta attgttgtga aaatttaaat gtcattggcg tgcatatcga
    28981 tggcgcaatg caggaggtgg ttactcatcc cgcacattta attcataaaa taccagataa
    29041 tgtgccttct gaaatggcgc cgctggcaga accgctgacc atcgctctac acgcgctgca
    29101 tcgggcaaac gttaaggccg gggaatatgt tgccatcatc ggcgcggggg ccattggtct
    29161 tatggcggca ttaagcgcgc gtcattacaa ggcaacgcct attctgatcg atattgtgga
    29221 agaaaggcta cgctatgcgc aaaagcttgg cgttccttat gtactgaacg ccgctgacga
    29281 tcaggttatc gacgctatta aaaatatcac ccacggcacc atggcgcagg tcgtgataga
    29341 agcctccggc gcaaatagcg ctattcgaaa tacgcttgat ttagcatcgt ttgctggtcg
    29401 tatttcgttt accggatggc caaaacagga aacgtcgctg ccgacgaacc tgatcaccta
    29461 caaagaactg gatttacgcg gctcccgcac cagtgccggt gaatttgatg aggcattacg
    29521 catgctgtca acgctggaga ttaatccgca agatgttgtc agtaaggtcg tcaatcttga
    29581 tgagatccct gatgcagtta aagaacttga tcgctatccg gagcgttact taaagattaa
    29641 tgctgttttc cattgattta cggcgagttc taccgcatgg catatccgcc atgcggtgtt
    29701 atttaccgac aaacttagcc gccgacaatc tttctcacat agcgtaaatg ttccagcgat
    29761 ccctcataag cgctgtcagc atcagactgg cgcatcgcat ccactatcgc tttatgttgt
    29821 ttgttgagat taagtaaaac atttctgtct ccagactgtt catcaagccc ggcgtaaggg
    29881 atattaatcc gttgttccca taacatacgg gacatatcaa acaacacccg gttacggctg
    29941 gcctcagaga tcgcaaggtg aaactcttta tccagcgagt aaaagccgtg gacgttatta
    30001 tcgttaatgg cttgatccat acgatgataa atcgcctcta tttggttgat gacgtcaacg
    30061 ttatcgtttt gtgcggctaa gcgcgcacaa tggctatcga ccagctcgcg agtagagaga
    30121 atttcttcga tggtatagtc actggcaagg tgttttttat ctgaaacgat aaccccatta
    30181 ccggactgaa tcacgatcca tccggagatc tccagtacaa taagggcttc tcgcaaggag
    30241 gcgcggctca cgccaagctg ttttgccagt tcgcgttctg gcggtaaaaa agttcccggt
    30301 ggaaaaatat tatcattgat cagcttaatg atgaggttgg ctatcttctg atagagcctc
    30361 tcctgcctga cctcaggtat aaccatgcgc cctccaatcc atatccaggg gattttgaat
    30421 ggatttagca taccatcctg gcgctggtga tcgtgataat taattaccgt gcatgataaa
    30481 gagaagcaac cgccggtagt ctccattacc ttcgccgaga ctaccgggga aactaaacag
    30541 agacgagcgg tttatccttt gacgttgatt ttctcgaaca cgggcgcagt cgcgttctta
    30601 aactgagaaa gggaccaggt tttatagttg atatcattgt agccgcgcac catcatctca
    30661 ccgtgcgtca agtcagacag cgttgtccag accgtatatt ctgagaccgg tttgcgggtg
    30721 gcgttgcctt ccccttcact ccccatataa tcaaccgtaa tatttttcgg acgatcaaaa
    30781 cggctcataa tatgtgcaag cgtattcatt gcgtcgtggg cggatgtcgc ttgcggcgca
    30841 tatgtggtgt aataaacgcc gcgtataaaa cgggaaaccg acgtatcgga cgatggcaag
    30901 tctgcaatag caatcccgct atcaggctgc atcactttta tcccgcccaa tgtgcctgaa
    30961 gagcggtcca cattggttaa ttgcgtataa ttattcagat ttgtcagatg ccaggggaat
    31021 gcgggaccat ttgtcatcac gcgagtggga ttgtcataga catggaattt gccattttcc
    31081 acttcaacga caatgcttcc tcctttcttg tcgtaaaacg cgtaatgaaa tggcgatttc
    31141 agatcgccaa accgatgcag ttccggtgac cagaatttgc cctcttttat tgcctgtttt
    31201 acctcgccga cagtagcaaa acgggccagc gcccattctc ccaacgaggt gacaggaatt
    31261 gcctgtttat attcactcgc gggcaatggc ggcaactgcg cattcatgat catgttttca
    31321 ctaaatgaca atcccgcgct attcatgcct tcaagtatgt ctctgctatc gccatcagta
    31381 atggtggaag taatggccag tatcggatac ttcgcctgat agcttatccc ctggctgcca
    31441 tccggcgttt ttttatcaaa ctgcgttccc gccggataat acgttaacca tgagggtaaa
    31501 tcctgcatat attccagcgt acgcccatga aaaatatcgc cttgtttatc ctgaatagca
    31561 agggttgtgc aggcctgtgc agccatggcg tatgaaaaca gcgccggagc gataaataac
    31621 attgctttac tttttttcat catgctctcc ttgtttgtaa aatggattgg atgaatatat
    31681 taaattaaac ctatcaatgg ttatgcagca cgtaattaat tgtgatctta ttttacaagc
    31741 taataaattt aactgacggg tttaaaggag agttaaacac agcgaactaa catgaaacgc
    31801 gttatccgtg tgaccattta aaaaaatccc atcatgttat aaataaaaaa cacggtttct
    31861 tatcaacatt aagagatatc ttcacaacgc tatatttact ccacatcacc aataacatta
    31921 aattaattta tgtttttgag taatgtgagt agcacacatg taatcagttg ttacgaatta
    31981 gaaacataat tgctactaaa acacgttgag aaagacaaga aatgcaacat atgatgccca
    32041 cactaactat agtggtttgg gataaacgtt atgcaaacac aagatacatt ttatcaagtt
    32101 atgcgtagac acggcgtgac aaggcgtagc ttcctcaagt tttgcagcct taccgcaacg
    32161 tctttaggcc tgagcagttc gatgattcct cagatagctt atgccctgga gaataaaccg
    32221 cgtacgccag tgatatggct gcatggtctt gaatgtacct gctgtaccga atctttcatt
    32281 cgctctgcgc acccgttggc aaaagatgcc attttgtcgc tcatttccct ggattatgac
    32341 gacaccatta tggccgccgc agggcaacaa gccgagcagg cgttggcgga tgtgatgcgt
    32401 gagtacaaag gaaattatat cgttgccgtg gaaggtaacg cgccgctgaa tgaagatgga
    32461 atgttttgca tactggctgg cgagccgttc ctggaaaagt taaaacgcgt cagcgcggat
    32521 gctaaagcga ttatcgcctg ggggtcctgc gcatcatggg gctgcgtgca ggcagcccgt
    32581 cccaacccaa ctaaagccac gccggttcac aaattaatta ccgataaaac cattattaaa
    32641 gtgccaggct gtccgcctat acctgaagtg atgtccgccg ttatcaccta tatgctggca
    32701 tttgatcgca tccctcccct tgatcgtctt ggacgaccca aaatgtttta tggccagcga
    32761 attcatgaca aatgttaccg acgcgcgcat ttcgatgccg gtcagtttgt ggaagcgtgg
    32821 gatgacgaag gcgccagaaa agggtattgc ctgtacaaga tgggctgtaa aggcccgact
    32881 acctataacg cctgttcaac cgttcgctgg aatgatggcg tgtcttttcc tatccagtcg
    32941 ggtcatggat gcctcggatg ttcggaagat ggattctggg attacggttc tttttacagc
    33001 cgggcaacgg gcattccgca aaccggcatt gaggctaccg ccgataaaat cggactgggc
    33061 gttgccggcg tcgcgggcgc tgctgccatc gctcacgcca cggttagcgc cataaaacac
    33121 gcccgcaata aaaacaacac gtcatcagaa aacgctacgg aaaagaaaaa ataattatgg
    33181 catatcctta tcagactcag ggttttacgc tggacaatag cggacggcga attgtggtcg
    33241 atccggttac tcgcatcgaa gagcatatgc gctgcgaagt gaatattgac agtaataatg
    33301 tcattactaa cgccgtgtcg accggcacca tgtggcgcgg cctggaggtt atcctgaaag
    33361 gtcgcgatcc gcgagacgcc tgggcatttg ttgagcgcat ttgcggcgtc tgcaccggta
    33421 cacacgcgct gacctcaatc cgtgccgtag aaaatgcgct gggaatcgcg attccggaca
    33481 acgcaaactg tatccgtaat atgatgcagg ctacgctaca cgttcacgat cacctggtgc
    33541 atttttatca tctgcatgcg ctggactggg tcgatgtagt tgccgccctg aaagccgacc
    33601 cgcatcagac ctccgccatc gcgcaaagcc tttccgcatg gccgctatcc tcgccgggat
    33661 atttccgcga tttgcaaaat cgactgaagc ggtttatcga gtccggttaa cttggccctt
    33721 tccgtaacgg ctactgggga catccggcga tgaaacttcc accggaagcc aatttgctgg
    33781 cggtcgccca ctatcttgaa gcgctcgatt ttcaaaaaga gatcgtaaaa attcacaccg
    33841 ttttcggtgg taaaaacccg catcctaact ggctggtggg cggcgttcct tgcgccatca
    33901 accttgacga aacgggcgcg gtcggcgcag tgaatatgga gcgcctgaac cttgtcagtt
    33961 ccatcatcca aaaagctcgc cagttctgcg aacaagttta tcttccggac gtcttgctga
    34021 ttgccagtta ttacaaagac tgggcaaaaa tcggcggcgg gttatcgagc atgaacctgc
    34081 tggcttatgg cgagtttccg gataacccta acgattattc cgccagtaat cttctgcttc
    34141 cgcgtggggc tatcattaac ggtcgtttcg acgaaattca tcctgtcgat ttaaccgccc
    34201 ccgatgagat tcaggagttt gtcactcact cctggtatac ctatggtaac ggcaataacg
    34261 ataagggcct gcatccgtgg gatggtctga ccgaaccgca actggtcatg ggcgaacact
    34321 ataaaggcac aaaaaccttt atcgaacagg tggatgagtc cgccaaatat tcatggatta
    34381 aatcgccgcg ctggaaggga catgcgatgg aggtaggtcc gctggcgcgt tatttgattg
    34441 gatatcatca aaataaaccg gaatttaaag aaccagtgga tcaactgctt agtgtattaa
    34501 agctgcctaa agaagcgctc ttttctacat tagggcgtac tgccgcgcgt gcgctggaat
    34561 ccgtatgggc aggcaatacg ctgcaatatt tcttcgatcg tctaatgcgt aacctcaagt
    34621 ccggcgatac ggcgacggca aacgttacgc tctgggaacc cgatacctgg cccacatcgg
    34681 caaaaggcgt tggtttcagc gaggcgccgc gcggcgcgct ggggcactgg ataaaaattg
    34741 aaaatcagaa aatcgacagc tatcagtgtg tggtaccgac aacctggaat gccgggccac
    34801 gtgacgataa aggtcaaatt ggcgcgtacg aagcagcgtt aatggggact aaactcgccg
    34861 ttcccgatca accattgaag attttacgta ctctgcacag cttcgatccc tgcctggcct
    34921 gctccaccca tgttattgat aatcatggag gggagctggt cagggttcag gtacgatgac
    34981 gacgattcgg aggtctcaat gcatctcaaa gaaataacca gccaggggta ctatatctat
    35041 gaagcgccgg tccgtttatg gcactggatc acggcgttat ccattgtcgt cctggctgtt
    35101 acaggatatt tcattggccg ccccctgcca tcgattcaag gtgaagcgac ctttatgttt
    35161 tggatgggct ggatacgact gatccatttt accacggcgt atatttttac tgtcgcgctg
    35221 ctgtttcgta tttactgggc atgtgtcggc aatgagtacg ccagggagat gtttctggtt
    35281 ccattctggc gccgcgcctg gcgcaaaggc gttatcagcg aaatccgctg gtattttttc
    35341 ctcgaaaaag aggcccatcg ttactatgga cataatccgg tagcgggact ggcggtaatg
    35401 ttctatttct ggatgtccgt actgatggtg tgtagcggct ttgcgctcta tggcgaagga
    35461 cttggaacag acagttgggc gtatcaatgg tttggctgga tgattcgcct gactggcaac
    35521 gatagcctcg cgctgcattt ctggcaccgg ctgggcatgt ggttcattat cgccttcgtc
    35581 attgcgcatg tttataccgc tatccgcgaa gacattatga gccgacaaag cgtgatttcc
    35641 gtcatgataa gcggctggcg ctggttcagg tgataacaat ggcagaagta acaatcttag
    35701 ggcttggcaa cctgctttgg gcagatgaag ggttcggcgt cagagctgcg gaaaagctgt
    35761 ttgaacagta tgccgataac gagaaagttg acgttgttga tggcggtacg caggggctgg
    35821 cgctgctgcc ctggctgcaa cagacagaaa aactgttaat catggatgct atcgattttg
    35881 gtatggcgcc aggttcgctg gcgatgtttc gtgatgaaca ggttcccgcc tatctgacgg
    35941 cgaaaaaact tagtttacat cagaccagtt tttctgaagt gctggcattg ctgcaattaa
    36001 ccggcggcca gttatcggag attgtgctga ttggcgtgca gccggaatgt ctggatgact
    36061 atggcgggag tcttacgccg caggtaaggg cgcaactgat gcctgcggtc tatctcgcgc
    36121 aggaagtgct ggcgcaatgg ggtatcaccg cctcttcagc ggccttgccc actgaaagac
    36181 tcaatcatta cagcctgtgt atggaacgct acgaagatga acggccagat gcgcaaagcg
    36241 cttgccgggt cggcgatatt cgggtgctac agagagagaa atcataatgt gtattggcgt
    36301 tcctgtgcag gttatttcac ccggtcagtg gttcgccaaa tgccgcgacc gacacggcga
    36361 gcttatcgac gttgatattc ggcttgtggc tcccccctta gcaggcgcat ggctgctgac
    36421 atttggcggc gcagcgcgac gagaaatgga cgaagcggaa gccgttgagg tactggtggc
    36481 gctggactcg ctggaacagg ccatgctcac gcaaagcgat ccgctgaccg gttttgccga
    36541 tttattgtct cgcacgcctg aattaccgga gcatttaaaa aaatgactat ctcaccccaa
    36601 aatcctgttt gtccactggc ggataaaggc tttctggtta ccgatgcgca aacgctcccg
    36661 tcgttgatta atgcgcatcc gactctgctg gttttgctgc aaagtgaccc caacaaacat
    36721 ccggaagtcg ccgacagttg ggtcattatc ccggagatcc tcaagcaatt tccggcgaca
    36781 tcttataccg cggcatttgc ggatagcgaa cagagtgaac tgatcgcccg ggagtatcgc
    36841 attctgaaat atccggcgct gcttttcttt cgccagcacc gttttgtcgg cagtctggcg
    36901 ggattatata gctggcaaga atactctcag cgggtggccg cattgctgac tacaccgggc
    36961 tatcgtcagg atattcccgt tattacgcaa tagaatgaaa ggtaacacac gtgaatcatt
    37021 ccagaactat tccagtcgtt aatattgccg gaccaggatc gcagccagaa gaggaagact
    37081 ttaactttct tcccatcccc gccggcatta atctcccgct gacgccggtt ttaccggaac
    37141 aggcgctgcc cgctgagctc cgtgttgcca gacacatcct gactacgctt attcgcgata
    37201 tggataaccc ggtggcaacg ctcccctttc ccctgagcta taagctgaat gccactgagc
    37261 aacagaatag cggtttattg gatcaactgc tcggcgaagg tgaaatctcc gcccgggtac
    37321 tattatccga tggaaaagaa cagcgtattc aggagacggt ttttacgggc gtctggcgtg
    37381 tacgtgaata taacgctgac cagcaacggg ttgccgatga aattatcatt ggcccgatcc
    37441 cggagagcat ctggcagacg catccgcagc cgccgattac accagaattg ccgccacaac
    37501 tggcgggatt gatgaatggc gcctttatcg cgcatgaaat agccgagcgc gtaaaacagc
    37561 cggtaaaaga gccgcatatc attaatttaa cgctattgcc agtaaacgat gccgatcgcg
    37621 agtatctgga tcatttttta ggcgaaggct gtagcgctat tttttcacgc ggatatggta
    37681 aatgccggat tgtaagcacg cattttcccg gcgtatggcg ggtcaattat ttcaatgata
    37741 tgaacacatt actgcaagat atgattgaga tagcggacat tcctgatatc gccgttgcag
    37801 gcatcgacga tatcgaagat gcctacacgg ggctaaaaaa tacgttggaa tggttgaaag
    37861 aatacccggt cacagaaaat gagccagtgg tgcgcatgga gtgcaaagta tgttggtggg
    37921 tttacgaccc tgcgctgggc gatgatgtat ggcaaattcc acccggcgtg cccttcaacc
    37981 agttacctga ttactggtgc tgtccggttt gcgaaaccag taagtccggg tttatggtga
    38041 tcgatgaagg taataattcg tgcaaagatt gaccgtctat tctcacccgc tatggattac
    38101 ctggcaggag gcgccgatcg gtcgtttgtt acagggcgca acgccggtat acgcaaaaac
    38161 gcttatttca cgtttgttta cgttgtgcgc tcaggcgcac aacgcagcgg cggctttact
    38221 gttgtttcct gaagagaagc cagatatgca ggccgcacaa caagagttgg cgcgagaaac
    38281 gctccgtcgc gcgttgaccg actggctccc cctgtttagc caccgacagg caaccgctga
    38341 agaatgggcg ttgttacgtc gcggagagtt atccccgctg gcaagcacaa tcttttttga
    38401 cgatgatcct cagacctggc ttgccgctgg cgtaaagggc tgggaagcct ggtttttgca
    38461 agagcgttct gaaaccgccc gctggctggc ggcagtacag aatatcatta cacctacact
    38521 accgatggcg tcgtccccgg accatacgtt aataacccat ggtcccctgg atgtctcgcc
    38581 tctggctatc gaatatccgc tgctgtcagc ctgttgtctt agcggaaaaa cgactgcgct
    38641 acgtctgctg gcccgctgca ttacgctcgc ccgaagtttg agcgcccttc ctaccctacg
    38701 ctggaatcgt tttgatgatg gcgagtggaa aatagcagta gtggaaaccg cgcgaggatg
    38761 gttagttcat caggccagac tgacgacgtc aggtaatatt accaaattca ggcagtacgt
    38821 cagtccatga accaatgtcg tataacacgc catagttacg accataatca acagacccca
    38881 tatcggcaaa tgccaaacca gcaaaaccga gacgcgtcca gctttgcggg gaaccgctgg
    38941 agtcaccatc ttccggacga ttggcgttga cctgatactc ccactgtcca aaaccggtta
    39001 gttgatcggt aatttgagtc tcgcctttaa tacccatacg gatataagat tgatcgccat
    39061 ccgtactatg attactggaa aaataatgca ggccgtcgac cttgccatac aaatccagtt
    39121 tattgccatc cttgttatag atttctgctg cgttggcggc tccagccatc atcacggctg
    39181 cggctaccgc agataacacc actacttttt tcattttata tgccttattt gtcttatttt
    39241 tggactttcc gcaaaacctg ctcgcggaac tgtccgggac aatatcacta acaattaccg
    39301 tgcgttaagt ttcaaagtgt aatattagct tgctatgtat tagtgatgtt aaaatgcaag
    39361 ttaagcatgg ctacatcaat ggtgtgccct gttttctgct gtaataacaa gggggtgacc
    39421 agtagagaac tggcttacgg tcggggatgc cgaggtgaga atggcactga acactctgct
    39481 gacacttcat taagacggaa tcataatcaa gtcagttgag gccacagccc ttcttatttt
    39541 tgtgtataat ttgttacgtt tacatttatt tttaaattag cgttatgaaa atatcagtac
    39601 tactgaaata gcacttcttc gcttcgcgta tttttactat ggttaattat cacatagcgc
    39661 aaacggtcat ttgtgtatca ctattcataa gattaactat ttaccagtgg taataaacat
    39721 aaaagtaagt caagggacaa caacaatact gaaactctaa atgttgatat tttgagtcat
    39781 gccgttacaa acaaatacga tattcttaat tgcactactc ccttttcggg gtagttttat
    39841 agaaggatgt tttttattgt tcgagagcca tgctccttta gtataaaggt gaacgtaaca
    39901 ggaaagataa agcgtctcaa aaacagacca tatgggtata actattatgc aaaaaacgtc
    39961 actatttttt tcagccgccg cgataacgtt aactctgatg gcgtcatcgg catcagcggc
    40021 aacgccaacc gccgcacaaa atgaagctac gtcgaccgtt aaacaagaaa ttacagaaag
    40081 cattaaccgt tacctttatt caatagataa ggcagaccca acgttaggca agcagctttt
    40141 ttatgtttca ccggaaacca gttttattca tccacgcggt cacgaacgcg gatggtcgca
    40201 gatcgctgaa aatttttatg gcaccactat gggtaaaacg ttcagcaaac gcacgttaaa
    40261 actggacgct cccccggcta ttcatgtgta tggcaatgcc gccgttgcag agttcgactg
    40321 gcattttacc gcggtacgcc gtgataatgg gcagactcaa cacacgacag gccgcgaaag
    40381 ccaggtatgg gcgaagatac caaacacagg atggcgaatc gttcatgtcc actactccgg
    40441 tccagccaaa accggcgttg gagaaggcta ttaagctttg cttttcaggt tatggcgcag
    40501 atgaacattc tgcgccagtt aagacgaact caggtcagtt gatagcgctt atccggtatc
    40561 cgttttgccg gaatatccct ttcatcattc atttgcagta aatcgatttc tatcgcattg
    40621 catatcgcat ccagcggtaa atcattattt tcagtaccga acggatcttc caactcttcc
    40681 gctaacgcat ccagcgcgat aaacgtataa gaaatcagca ccgaaataaa cggcgtcata
    40741 tagtgcagat caaccaccag tgcaaatggc aacataatgc agaaaagata aaccgtacga
    40801 tgcaaaatta acgtataggc aaaaggcacc ggcgtgttgg cgatgcgctc acagccggcc
    40861 aacactgacg acatatcatt taagcggttg ttgaggctat gaaataaaat atcggaaagc
    40921 tttccgctgc ggcggcgaat cgccagccac tctcccatca gcaataagat acggttagcg
    40981 ggggaatggg aagcgacaac tttctgtaac gcctcctggt caagatagtt tcccagaact
    41041 tgcgtttgag gctgtcgacg caatgtcata cgcaaacagt gggcaaaagc gatttgtaac
    41101 cgaacaaaat cctcgatacc gcgttcatca ggcaaggttg ttttcacctc tcgcagtatt
    41161 gagcgtgaag cgatcatcaa ctgcccccac aaatgtcggg cttcgacgta acgcgcataa
    41221 caggcattat tgcgaaaccc aagaaaaatg gcgatagcga cgcccagtat gctaaacggc
    41281 gcaagggtaa acttaatacc cagcattgtg taccagggca gcatgataat aacggcgata
    41341 gaaagaagaa agttaaggag cagtcgtgaa aagattttag ataacacgga accatgccag
    41401 acaaatatca ggcgaatcca gtgctgttgt ggtctaacga tcatgattat cttcagcagg
    41461 tgaaaaagca ctgtcattaa acgtgatcca gatcaaggtt gcaagcttct ggtgatacac
    41521 ggattccctg ctctgtagaa catttttttg catggtgctg acaggcgttg gaaaaaaaca
    41581 accaaatgta tgttgtaact aaaaagacat ttcagcacat gagatatatg acggtcaacg
    41641 gctgctatca gtggtatagg gtgatttatc ggggaaagcg tcagcaacga cgcgctaccc
    41701 taccgctgat tcatttgtat gaccagccag taatgaataa cgctgacaat atactgttgc
    41761 tgcgctttac tcagcggttc tccctgagga atctggtgcc acttcgccag gcacccgcga
    41821 cagcaggttg ccgtcgcatg ttgcgcgata aataccggat ggccccgcat cggcgtttgc
    41881 ttaccatcat tcgccgggtg agctggcacc agtcgctggg cgataaaatc ggcggcgtgt
    41941 ttatcaatca cctccgcgcc tttatcccag caatattgtc tttcttttat cccgagacga
    42001 aagcgcgaac gaaatgtcga tcgcgccagg cgggcaaaga gcggttcaag cgcattcatc
    42061 agtataccaa acgtcctaac gtttgtgtta attgttcaag cgcggcgata cctgccagag
    42121 agtttcccgc aggatccagc tccggactcc agacggcaat cgccatttca tgcggcacaa
    42181 tggcgacaat accgccgccc acgccggatt tagcgggcaa tcccacccgc caggcaaact
    42241 cgccggcatt ctgatacata ccgctggtcg ccattagcgc attaatctgc cgggcctgca
    42301 tgggggtaac taccggctcg tcgagatgaa acgcctcgcc ctgattcgcc agaaagacaa
    42361 acgtcctcgc cagttccatg cagctcattt tcaacgcaca gtagtggaag taattttgca
    42421 acacggtagg cacatcatga tgaaaattac cgaatgattt catcagccag gcaatagcgg
    42481 cgttacgggc ggaatgctca aattcagagc gcgcgaccgt agcgtcatat gtaatatccg
    42541 atacgccgca aagcgcgcgc gcaacttcca gcatccgctg acgcggcgcg ctaagccgcc
    42601 cttgcaacat gtcgcatacc accagcgcgc ccgcattaat aaatggatta cgcgggatgc
    42661 cttgttccat ctctaactga accaacgaat tgaacggcga gccggaagga tcttttccga
    42721 cacgctgcca gatctcctct tccggataat gacgcatcgc catcaccaga ctgagcactt
    42781 tcgaaataga ctgaatagag aagcgttcgt gcgcatcgcc cgcctgataa tgctgcccgt
    42841 ccacggtaca aatcgctatt cccagctttg aaccctcgac ggacgctaat gccggaatat
    42901 agtcagctac tttgccctgg ccaatgaggg ggcgaacgcg ctgtaaaatc gtttctaaaa
    42961 ttgcattatc catggccctg gccacaacat gctccttgct cgcaggtctg aaaaggcctg
    43021 cgagtatagc agagggcgcc acgcgacgtc agggcgatta gacgcggttc ttccagacgg
    43081 tctgcacatt acaaaattcg tgtaaaccaa agtgcgaaag ctcgcgaccg aagccgcttt
    43141 tcttcacccc gccgaatgcc acacgcgcat cgctggcgct gtacccatta atgaataccc
    43201 caccgcactc aagacgcgcc gccatctccg cggccagcgt atcgtcggcg gtaaagatcg
    43261 tcgccgacag gccaaactca ctgtcattcg ccagcgcgag ggcgtgctcc gcatcttttg
    43321 caacggtaat ggcggcaaca ggcccaaaaa gctcctgacg aaatgccgtc atgtcaggag
    43381 tgacatccgc cagaacggtc gcggcataat agttgccctc cccggcgatt ttctcgccgc
    43441 ccaacagtag ccgtgcgcct tcggcgacgg aagcctgcac ctgttgatgg agttcatcac
    43501 gcaaatcaaa gcgcgccatc ggccccagat cattctcttc aaccagagga tcccccatct
    43561 ttaatgctgc ggcagccgcc acaaaacgat cgttaaacgc ctgcgcaatg ccctcttcga
    43621 caataaaacg tttggcggcg gcgcagactt gtccggtgtt ttgatagcgt ccggcaaccg
    43681 cggcttttac cgccagctcg agatcggcat cattgagtac aataaacgga tccgagccac
    43741 ccagttccag tacgcacttt ttcagcgccg ccccagcctg agcgccaatc gccgcgccgg
    43801 cgcgcacgct accggtcacc gtcaccgccg cgattcgcgg atcgttaatc atctgactca
    43861 cgccctcatt attggcattc acccatccat agacgccagc gggagtaccg gcttccgtca
    43921 agattcgggc tatcatctgc gcgcaacccg tgacattggg cgcatgtttt aacaagtagc
    43981 tattccccgc caacagtatc ggcactgccc cgcgtaacac ctgccataaa ggaaaattcc
    44041 acggcattat cgccagaatg acgcccagcg gacggtattc aatcaccgcc tgctgatttt
    44101 ctaccagcgt aggctcagga ttcagcattg ccggaccatg ttccgcatac cagtcgcata
    44161 acgcagcgga tttcgtcact tccgcacgcg cctgctttat aggcttaccc atttcacgcg
    44221 taatacattg cgccatctct tctgcatgag cgcgaagcgc ctgaccaata tcgcgtaatg
    44281 tttgcgcccg ttgcgctacc gatgtcattt tccacttttt gaaaccgctc gccgccagac
    44341 tcagcgcatg ttcaatctct tgcgcgttag cccagggcat tgccgccagc gtctggccgg
    44401 tcgcaggatt aacggataac gcctgtgttg cagtcatcat ggtcatgttc tttctctcgt
    44461 tatcagggga gttgtaccat catgacgccc tttacccttt ctgaaaaatg aataatatta
    44521 accagactat tcacgaattg agaaaaccat ggacctgacg caactggaaa tgtttaacgc
    44581 tgtcgctctg acgggcagca ttacgcaggc ggcggcaaaa gtgcaccgcg ttccgtccaa
    44641 tctgaccacg cgtatccgcc agcttgaagc cgacctgggc gtctctctgt ttattcgcga
    44701 aaaccagcga ctcaggctgt caccagccgg gcataacttt ttacgttaca gccagcagat
    44761 cctggcgctg gttgatgaag cccgtatggt ggttgccgga gaggaaccgc aaggactgtt
    44821 ttcactcggc gcgttagaaa gtactgccgc cgtacgtatc cccgcgctgc tggcgggtta
    44881 taaccagcgt taccctaaaa ttcagttcgc gttaacgacc ggtccttccg gcgccatgct
    44941 ggatggcgtg ctcgaaggaa agctgaacgc cgcctttatt gatggcccgc taatgcatcc
    45001 ggggctggaa ggtataccgg cttaccagga agagatgatg atcgtcgcgc cacacggcca
    45061 ttccgtcgtt tcgcgggcca gcgaggtgaa tggttataac atctatgctt ttcgcgccaa
    45121 ctgttcttac cgacggcatt tcgaaagctg gtttcatgcc gatggcgcga cccccggtac
    45181 gattcacgaa atggagtcat atcatggaat gttggcgtgc gtaattgccg gcgcaggtat
    45241 tgcgctgatg ccagcaagta tgctcaacag tatgccagga catcatcagg tggaagcctg
    45301 gccgttggcg gagaagtggc gctggcttag cacctggcta atgtggcgac gcggggcgat
    45361 gacgcgtcaa cttgaggcct ttatcgagtt acttaacgcc caactggcga gcgccgactg
    45421 aagacgaaac ggcctgcgaa gtaaatgaga agcaggtcac aaaatgattg tcttttcgcc
    45481 agtaaacgtt ttaagatcgc ggtctcacct tctcgcaact aacccgaaat atttttatga
    45541 caatcaatcc agtttcccgc aaggtcgcgt ggctacgggt agttacgctt gctattgccg
    45601 cttttatttt caataccaca gaatttgtgc cggttggttt gctatcagac attgctgaaa
    45661 gctttcatat gcaaaccgcg caggtcggca tcatgctaac catttacgcc tgggtagttg
    45721 ccgttatgtc gctgcctttt atgcttctta ccagtcaaat ggagcgccgt aagctactca
    45781 tttgtctgtt tgttttgttt attgccagcc atgtgctctc ctttctggca tggaacttta
    45841 ccgtgctggt cattagccgt attggtatcg ctttcgccca cgctattttc tggtcgataa
    45901 ccgcctcgct ggcgatccgc ctggcccctg ccgggaaacg cgcgcaggca ttaagtctga
    45961 tagcgaccgg caccgcgttg gccatggtgc ttgggctgcc gataggtcgc gttgttggtc
    46021 agtattttgg ctggcgcacc accttttttg ccatcggcat gggcgcatta attacgctgc
    46081 tatgtctgat taagcttcta ccgaaattgc cgagcgagca ttccggctca ctaaaaagtt
    46141 tacctttgct attccggcgc ccggcgctaa tgagcctcta tgtactaacc gtcgttgtgg
    46201 tgactgcgca ttacacagct tatagctata ttgaaccgtt cgttcagaat gtcgccgggc
    46261 tcagtgcgaa ttttgctacc gtcctgttac tgatcctcgg cggcgccggg atcatcggca
    46321 gccttgtgtt tggtaaactg ggtaatcgtc atgcctcgtc gctcgtcagt atcgctattg
    46381 ccctgctggt tgtctgtctg cttctgctgc tgcctgcggc ggatagcgaa gcgcatctgg
    46441 ccatactgag cattttctgg ggcatcgcga ttatggtgat agggcttggt atgcaggtga
    46501 aagtactggc gctggccccg gacgcgaccg atgtcgcaat ggcgctattt tcaggcatct
    46561 ttaatattgg tattggcgct ggcgcgctgg taggcaatca ggtgagtttg cactggtcaa
    46621 tgtcggccat cggctatatt ggcgccatac ccgcctgtgc cgcgctggta tgggctgtgc
    46681 tcatattccg caaatggcca gtgacgctgg aagaacaacc gcattaagac attcgtctgc
    46741 cgggaacagg tttccggcag acgacaatgc gccttagtgg tacgttttaa taatttccaa
    46801 cacgccgttg ataataaatt gcacgcccat acacaccagc aggaatccca ttaagcggga
    46861 gatcgcttca atcccccctt tacccaccag ccgcataata gcgccagaac tgcgtaagca
    46921 tccccacagg atcaccgcca cggcaagaaa aataatcggc ggcgcgacca taatgaccca
    46981 gtcgggaaac tcgccgccat gacgcaccgt ggaagcggaa ctgatgatca ttgcgatggt
    47041 ccccggtcct gcggtgcttg gcatagccag tggaacaaac gcaatattgg ccgtcggttc
    47101 gtctgccagc tcctccgatt tgcttttcgc ttccggcgac tcatgcgcct tctgctgcgg
    47161 gaaaagcatt ctgaagccga taaacgccac gattaacccc ccggcgatcc gtagccctgg
    47221 aatcgaaata ccgaaggtgt tcataactaa ctgcccggca tagtacgcca ccatcataat
    47281 agcgaagaca taaaccgaag ccatatagga ctgccggttg cgttccgcac tattcatatt
    47341 gcccgcaagg ccaagaaaca gcgccacggt ggttagcgga ttggctaacg ggagcagtac
    47401 gaccagcccc aatccaatcg ctttaaacaa atccatcata atactatctc ttacccatca
    47461 gcgtttcatg aaccggaagt ataaagtgaa attgcccagg cgcgccattt cgccagtgtg
    47521 caagtcaata ttttttacaa cctataacct gtaattatca attagttaca agttatcaca
    47581 gcacaatacc ccggacgcct tttagcaaat cgtggcatcg gccaattcat ttagttgact
    47641 tatacttgcc tgggcaatag tatctgacaa aattaattac ttgccggggc aaccattttg
    47701 aaaagcacca gtgatctgtt caatgaaatc attccgctgg gtcgcttgat ctacatggta
    47761 aatcaaaaaa aagatcgcct gttaaataac tatttatccc cgctggatat caccgcaaca
    47821 cagtttaaag tgctgtgctc gatacgctgc gcgggatgta ttaccccggt tgaacttaaa
    47881 aaagtgctgt ctgtcgatct cggcgcattg acgcggatgc tcgaccgcct gctgtgcaaa
    47941 ggctggatcg aaagactgcc gaatcctaat gacaaacgcg gcgtactggt gaagctaacg
    48001 ccggacggcg cggcaatttg tgagcaatgt catcaacgac cagggcaaga cctgcatcag
    48061 gaattaacaa aaaacttaac ggcggacgaa gtggcaacgc ttgagtattt gctcaagaaa
    48121 attctgccgt agacaaaaaa gaggtatgac gatgtccaga cgcaacactg acgctattac
    48181 tattcatagc attttggact ggatcgagga taacctggag tcgccgctct cactggaaaa
    48241 agtgtctgag cgttcaggat attccaaatg gcacctgcaa cggatgttta aaaaagagac
    48301 cggtcattca ttaggtcaat acatccgcag ccgtaagatg acggaaatcg cgcaaaaatt
    48361 aaaagagagc aacgagccca ttctctatct ggcggaacgc tatggctttg agtcacagca
    48421 aacattgacc cggacgttca aaaactattt tgatgtgccg ccacacaaat accggatcac
    48481 caatatgcat ggcgaatcac ggtatatgct gccgctgaac catggcaact actagtttgt
    48541 ttatgcgcca cgcgaagagc accatgaaaa tgctgtttcc cgccctgccg ggtctgttac
    48601 ttatcgcctc cggatatggc attgcagaac aaactttgtt acctgtggcg caaaatagcc
    48661 gcgatgtgat gcttctgccc tgtgtgggcg atccgccaaa tgaccttcac cccgtgagcg
    48721 tgaacagcga taagtcagat gaattaggcg tgccctatta taacgaccaa cacctttaac
    48781 ctctttgccc cgttttgcgg ggcatttttt tagtaccgtc tggctatgac aagtccgccg
    48841 ctattacccc gcggcatggt ctgaaattag cgtttgtctt cttagtaaca taatgcctca
    48901 tcccctgacg cgcgcagtac ggcgcacacg aaatccaaac acattgatat agagtccagc
    48961 cataatcagt actgcgcccg caagctgcat cccggtcaac gtttccccga gtaacaccgc
    49021 ggcgctcgcc agcccgacta ccggcaccag caatgataac ggcgccacgc gccaggtctc
    49081 atagcgcccc agtaacgtgc cccagatgcc gtagccaagt atagtggcga caaaagccag
    49141 ataaagcagc gacaatatcg tcgtcatatc gatggtaata aggctttgcg taatgtgatc
    49201 cgccccctcc agtagcagcg atgacagcag gaacggcagg atcgggatca gcgcgctcca
    49261 gaccaccagc gacatcaccg ccgggcgcgg actatgttgc ataatttttt tattaaagat
    49321 attgccgcag gcccagctaa atgccgccgc cagtgtcagc ataaatcccg acatcgctat
    49381 atgctgtccg ttgagactgg cttcaatcaa taccagtaca cctataatcg ccagggcgat
    49441 ccccgctaac tgcttacgtt gtaaccgctc actaaaaaca aacgccccca atgccatggt
    49501 aaaaaaggcc tgcgcctgta ataccaacga cgccagtcct gcgggcatac caaactttat
    49561 cgcgcaaaag agaaaggcga actgcccaaa gcttatcgtc agcccatagc ccagcaacag
    49621 cgtaagcggg actttaggcc gggcgacaaa gaaaattgcc ggaaacgcca ccagtaaaaa
    49681 ccttaatcct gccagcaata atggcggcat atggtgcagg cctactttga tgacaacaaa
    49741 attgagcccc catacgacaa ccaccagtaa cgccaaaaaa ccgtctttac gcgacatcat
    49801 cggcccctgt cattattaaa attttgtaaa aaggtaagtt atcggaaatc agtgcgccat
    49861 aacaggactt ttctttttac cgtgagcatg gcattgaaca acacacgatg ggcaaaatcc
    49921 tgcgttatgg tatgttaaga ctacgctata gcgtacagac atcatgcttt tgcgggcacg
    49981 gtagattaaa acgtcccgat acgtaacctc catttcaggc aggaaaaatg aatccaggat
    50041 tgagacgttc gacgttggct ctactcgcct catcgctgtt attgacaatt ggacgcggcg
    50101 ccacgctccc ctttatgacc atctatctta accgtcagta cggtttaggc gtggatctga
    50161 ttggctacgc gctgaccagc gcgttaacga tcggcgtcat ctttagtctt ggctttggga
    50221 ttctggcgga caagtttgat aaaaagcgct acatgttact cgcgattatc gccttcgcct
    50281 gcggatttat cgccatccca atggtgcata atgtcgtact ggttgtcctg ctttttgcgc
    50341 ttattaactg cgcctattcg gttttttcta ccgtcctgaa ggcctggttc gccgataacc
    50401 tcaccgcgac aacaaaaaca cggatttttt cgctcaacta taccgtactc aatatcggct
    50461 ggacggttgg cccgccgctc ggcacgctgc tggtgatgca aagcatcaat ttacccttct
    50521 ggcttgccgc tatctgttcc gcatttccgc tggtctttat tcaggtatgg gtgacacgtt
    50581 cggttgccgc cagcgagggg aaaaatgccg ctatctggtc tccctccgtt ctgctgcgcg
    50641 acaaagcatt attgtggttt acgctttcgg catttctggc ctcctttgtg ggggttgcct
    50701 ttgcgtcctg tatttcacag tacgttatgg tcgttgccga tagcggcttc gcggaaaaag
    50761 tggtagccgt cgtcctgccg gttaatgcgg ttattgtggt cagtttgcaa tacgccgtgg
    50821 gccgtcgact taccgccgtc aatattcgac caatgatgac gaccggcacc gtctttttta
    50881 tcgccgggct catcggattt attttttcag gcgacaatct gtttttttgg gggctttcag
    50941 cggcagtatt cacgattggc gaaattattt atgcccccgg cgaatatatg ttaattgaca
    51001 acattgcgcc tgccgggatg aaagccagct atttttcagc gcaatcgctg ggctggctgg
    51061 gtgcggcggt aaacccgctg gccagcggcg tcatcctgac gacgcttccc gcctggtcgc
    51121 ttttcgttgt cctgataatc gccattgtgt tcgcctgggc actgatgtta aaaggaatgc
    51181 ggattacccc tacgcaacag gctatcacct gttaattatc tgcagccagt catgtgcgct
    51241 gtttctggcg cactgggtta accctatata ttgcaggcta attatctgct gtaactgcgg
    51301 taattcagga atattcctgg gcgctgacga aaatattcta atgctttacc cttccagtaa
    51361 aataaatacg caattcagac tttgcttaag tataaattag tactatagtt tgtacgaggt
    51421 tttttaaaaa agaggatgca cgctaaaata aggagaaacg agatgttagg tagtattaac
    51481 ctttttatcg ttgtattagg aattatttta ttttccggat ttctggccgc ctggttcagt
    51541 cacaaatggg atgattaatg aacggagata atccctcgca gagccggccc cttgctgcat
    51601 cgttgcgcaa ggggccgctt ttgtctggat ggcaggcaaa aaaaaaccgc cggttcacca
    51661 gcggtaaatg cttgcatgga tagatttgtg ttttgcttat acgctaccgg gcaaattctt
    51721 gcgaggataa cggatcgcta acgactgtag caccgtcaat atcaatgaag cttaaacgat
    51781 acgcaaccag acctgaataa gacattatgg gaccttttgt ccccagggcg cttttacaag
    51841 acccatagta tcaggccagc cgcatgcccc gtatggctga cctggatatt gccggttagc
    51901 gcgcgttatt tttgcaatcg gttcacgcgg acaagcggtt ccttcgcttt cttgtccaga
    51961 tttgatccgg ctgaacttcc cgcccatcaa atacggcgga aggaattatc acgttaatct
    52021 cgccggactt atcacgaaat acatagcgat cgtcgccttt atgatcaata aggttgccgc
    52081 gcagcgaaac ggtcgcgcca tcatgcaggg tttttgcctg ttcgatggtc attttttctg
    52141 catcatccgt accgcgataa ccatcctcaa tagcatgagg cggcggcggt gccacgtctt
    52201 tttttaatcc cccctgatct tccgctagcg cgtaaggcat tatcagaaaa cttaaaaatg
    52261 cagccacctg tagtttcatg ctctctcctt aataacgtct atttgacgta ttaagtctgg
    52321 ccgctatttt tagtttttac aaacatgaat ttacccgcag aatattaagc aataaaatca
    52381 acccatccgg attaatatgc aaccgatatc agcgccagtg agcgcgaaag cgtaacggcg
    52441 taatagttaa cttgccacat agctgaagtc atatgcatca acgtctggat agcaattcag
    52501 aataatcggc tttatttttt gaggataatg gccttccaca taatcaatga cagtcatcgc
    52561 cgtaagaaag taagcaagtt atgcaacagc gggtttgttg gtaactggat aaaataatca
    52621 ttcactgaca atgtcataaa ataaatatgc catacttgag aagaacgaac agatttcatt
    52681 tgtctctgta acggaaaaat aaacgatgag attagaacag cacgatattg tcacccttga
    52741 tgaagccgaa tccgtcgata gcctgacaaa aaaacttggt gatttactgg ttaaccagaa
    52801 actccgtctg accagtgcag aatcctgccc tggcgggaaa ctggcgtcag cattgtgcgc
    52861 agcagaagat acgccctcat tttacggtgt ggggtatgtc acctttactg atgaagccaa
    52921 agcaaaaatc ttacgcgtac aacgccacag tcttgccgaa cataccgccg tcagcgaagc
    52981 ggttgttact gaaatggcac agggcgctaa ggatcaggct gaggtcaata tcagcatagc
    53041 gatcagcggc tatggcggtc cggaaggcgg cgaagatggc acgccggcgg gcacagtttg
    53101 gtttgcctgg aatattaaca atacaacttt tacaagccga caacatttca acggagattg
    53161 tcaggaagta ttggaaaaat gcgtacgctt cgccctcgct gaattgcttt ttctgttaac
    53221 gaagaaagca taaacaataa tttcatctga ccggtcagaa taactcccgg tcagaataaa
    53281 aaaatgcgag cctatggccc gcatcgtatg tgcaatattt cagaatatat ttatgaaata
    53341 tcagcagtaa aattaattgc cggatttccg tccgccactg tggctattct ggccaccttt
    53401 tttacccgct tcagatgcac gttgtgggtc gtttttaaag ttcccaccgc tatgctggcc
    53461 gcctttacga cctgcttctg aggctttctc tttatcttct gcaaaattac cggaaccgcc
    53521 gcgatgttct gccataatat aatcctcatg atgatgttgc gttttaaata tgatatgtct
    53581 tctcatatca tgtgatacag ttctaaatct agtcgccctg tgcgcagtgt taaattcatt
    53641 tctgcattat ttacataata ccaccacatg gcggaaaata tattttttga aaacatcaac
    53701 agcgaagcgg taataaatct ttggcaatca agccaccacg ggaaaataag tagaaaaatc
    53761 cgaatgcacg ccctcgttat attcagacaa cttaacccca taaatttaac tggctgtcat
    53821 cagaagtgca ggattcattt tcaggcggtt gttcgacagt gccgaacaac cgtatcagct
    53881 tagtgatcga gcccacgata ttgcaatatg gtgtcaatat gcggttcatg tccacgccag
    53941 gctgaataaa gcgtttctaa atcagtacta ttcccccggg aaaggatagc atcacgaaaa
    54001 cgctgcccgt tttcacgcgt caggccgccc tgctctacaa accattgata accgtcatcc
    54061 gctaacattt gcgtccacag gtaggcgtag tatcccgctg cgtagccgcc gccgaagata
    54121 tgggcaaaat aactgctgcg atagcggggc ggcactgccg gtaaatcaag atgctcggcg
    54181 gccagcgcct gctgctcgaa ctcagcgaca gactgctctg ctacgctctc ctccagcata
    54241 tgccagcgca tatccagcaa tgcggcgccg aacaattcag tcatatcgta acctttatta
    54301 aataaactcg ccttgcgcat tctttcctgt aaatcagcag gcattttttc accgctgtcg
    54361 acatgacgcg cgtagcgttc gaacacacgt ggatggctcg cccaatgctc attaatctgg
    54421 gagggaaact cgacaaagtc gcggggcgta ttggtacctg aaagcgtggc atagcgctga
    54481 acggcaaaca aaccatgtaa cgtatgacca aactcatgga agagcgtaat aacgtcgtcc
    54541 caaagcagca atgcaggctg cccatcaacc ggtttctgat agttacatac attgtatata
    54601 acgggccggg tttcattgag tgtggattgc tcgacaaaat tccccatcca cgcgccgccg
    54661 cttttcgagt cccgcgcgaa gaagtcgcca taaaataacg ccatgccgac accatcggag
    54721 tcgaaaatct cccacacccg aacatcaggg tggtacaccg gaatgtcaaa acgctcgacg
    54781 aaggtgatgc cgaatagctg gttggcggtc cagaaaaccc cctcttgcaa caccgtattt
    54841 aaggcaaaat agggcttcag ttgcgcttca tctaacgcat atttttcccg ccgtacctgt
    54901 tcggcataga acatccagtc ccaggcctga acggtgtagc cgccctgctc accatcaatg
    54961 acgttctgaa tttccgcctg ttcattgagt acccgctgac gcgctggcgg cacaatgcca
    55021 cgcataaagc tcagtgcggc ttgcggcgtt ttcgccatct gatcggccat tttccatgcg
    55081 gcataattgg ggaaacccag cagttttgcc tgacagcggc gaatctctac cagacgctga
    55141 acgatagcgc gggtatcgtg ggcatctcct ttttccgccc gagtccatga cgctgcgaat
    55201 aaattttcgc gagtctggcg atcgcgcagc gtagcaagcg caggctgttg cgtcgtatta
    55261 aggagcggaa tgaaccagcg ctcctccagg cctttttcac gcgccgcttc agcagcgacg
    55321 gtcatttctt ccgggcttaa tccttccaga caatgcgcgt catctaccgc cagcccgccc
    55381 gctttacttg ccgccagcag acgctgatta aactgactca ttaaggtcgc ggattcagta
    55441 ttcaatactt tcagtcgcgc tttatcctct tcggcaagct gcgcgcctgc caacacaaaa
    55501 cgctgatgga taacatcgac caaccgtagc gactcatcat ccagccccag tgagtgacgc
    55561 tgttgccaga cggcatccac gcgagcgaat aacgcgctat tcagataaat atcgttggag
    55621 agcgccgcca gctcggcaga aaaggcctca tccaaccgct ggagttcatc gttagtgtgc
    55681 gcagccgtca tcgcgaaaaa aacgctggtg acgcgtgaca gaagcgcccc gctttgctcc
    55741 agcgccagaa gcgtattcgt aaaatcaggg gccgccggat gattgacgat ggcctcgatt
    55801 tccacgcgtt tttgccgcac gccctcatca aaagcaggac gataatggca atctttgatc
    55861 cgatcaaaac gcggtgcctg ataaggcaac atactctggt ctaacaaagg attcgtcgac
    55921 atttttcact cctgaaaata ggttgatcat aagagtaagc ttccccctat gctgaccgca
    55981 accgtgttaa ccaggattac cctttcataa acgccgcgtg ctatggtaat acaacacaaa
    56041 aagcgttgag gaactgtgtg atgatcgttt tagtaactgg agcaaccgca gggtttggcg
    56101 agtgcattgc acgccgtttt gttgagaatg gacataaagt cattgccacg ggacgtcgtc
    56161 atgaacgcct gcaagcgtta aaagatgagc ttggcgagaa cgtattgacc gcccaactgg
    56221 acgtgcgcaa ccgcgcggcc atcgaagaga tgatggcctc tctgcctgcg cagtggcgcg
    56281 atattgatgt gctggtcaat aacgccggtc tggcgctggg tcttgaaccg gcgcataaag
    56341 ccagcgtaga agactgggaa actatgatcg atactaataa taaaggctta atttatatga
    56401 cccgcgccgt gctgccagga atggtcgaac gtaatcgcgg tcatatcatt aacatcggtt
    56461 caaccgccgg cagttggcct tatgctggtg gcaacgtcta tggcgcgacg aaagcctttg
    56521 tgcgccagtt tagcctgaat ttgcgcacgg atttacacgg cacggcggtt cgcgtgaccg
    56581 acattgaacc gggtctggtt ggcggcaccg agttttccag cgtccgtttc aaaggcgacg
    56641 atgagaaagc gggtaaaacc tacgaaaata ccaccgcgct cacgccagaa gacattaccg
    56701 aagcggtatg gtgggtggcc acactccccg cgcatgtgaa tattaatacc gttgaaatga
    56761 tgcctgttac ccaatccttc gcagggctca gcgtccaccg tagctaaggg ggtatacccg
    56821 gtctgcgggc cgggtaatcc ctggcaaacg tatctgcaac cagaaacatg atcggtatag
    56881 accgccacgg aaaagtggta gagtatccgg gtcaaccgcc taaaaagtaa gaatgaatga
    56941 ccgtcgaaac gcagcttaac cctacacagc ctgtcaacca gcaaatttac cgtattcttc
    57001 ggcgtgatat cgtgcattgt cttatcccgc ctggcacgcc gctatcagaa aaagaggtct
    57061 caacccgttt taacgtttcg cgtcagccgg tgcgcgaggc ttttataaag ctggcggaaa
    57121 atgggttgat tcagatccgc cctcagcgcg gtagttatgt gaataagatt tcgctttctc
    57181 aggtacagaa tggctgcttt gttcggcagg cgatcgaatg cgcggtggtc cgccgtgcgg
    57241 cggcgatgat caccgacaac cagtgctatc aactggcgca aaacctgcac ctgcaacata
    57301 ttgccatcga gcgcaaacag attgatgatt ttttccagct tgatgacgat ttccaccaaa
    57361 aactggcgca gatcgccgat tgccagttag cgtgggatac cattgaaaat atcaaagcga
    57421 caattgaccg ggttcgctat atgagtctgg atcatgtttc tccgccggag atgttgctgc
    57481 gccagcacca tgatattttc tccgcgctgg aaaatcgtga cggcaatgcg gttgagagcg
    57541 caatgaccca gcatttgcag gaaattagcg aatccgttca gcttatccgt caggaaaaca
    57601 gcggctggtt tagcgaagag taaccccctt taacgtcggg gtgagacgcc ttctccgctt
    57661 tctcgccctg cacattcccg cctaaaaagc cgtgagcttg atcaaaaaca aaaaaaatcc
    57721 gcaacgataa gcgtatttat atgtcgcccg tcatgcgggg aaacctgcgg gctttggcag
    57781 taagtttgaa aggagaaaac accatgatga catacgatcg taaccgtaac gcaatcacca
    57841 ccggtagccg ggtcatgata agcggcacgg gccataccgg gattatcaaa gccattgaga
    57901 gcgaaggtct ggatgcaggt caaattcgcc gcggcaaaac ggtgattgtc gaaggttgtg
    57961 aaggtaaatt cgcgccagtc gaactgattc gtcttggcat gaactgatac cactggccgc
    58021 taagaaccgc tccggccttc ccggtagcat aatgctaccg ggtctctgtt acgctatttc
    58081 aagcgctcgg catatttcgc cacgctcgct ttcgcgccat atgtcagtaa actgtcatag
    58141 gcttcttgca ctttttgcgt aaaccgcgcc gcctgcggca aatcgttgcc gaaaatttca
    58201 gccattccca gcagcgcctt aacacgactg gcgccttctt cactgtttgc cacggcgcgc
    58261 tgaataaccg gcaatagcgg atcgctgacg tcgatcgcct taccctgctc atccacgccg
    58321 ccaacgtaac gcatccaccc cgccacgccc agcgccagca aatcaaaatc gctatgatta
    58381 gcaagatgcc agcgaacgga gtccagcata cgctgcggaa gtttctggct gccatccatc
    58441 gcaatctgcc aggtatgatg acgcagcgcc ggattacggt aacgcgcaat caactgatcg
    58501 gcataacgct gtaaatctac cccctggact ttcagcgttg gcgcctgctc gcgtaacatt
    58561 aacgcctgcg cggtcagacg atagttgtcg tcatccatac agtcattaat atgctgatag
    58621 ccggcaagat accccagata agccaggaat gaatgactgc cgttaagcat tcgcagtttc
    58681 atctcttcaa acggaaccac gtcggcgacc aacgtcgcgc ccgcgttttc ccactgcgga
    58741 cgccccgcca caaacgtatc ttctatcacc cactgacgaa acggttcaca ggcaacgccc
    58801 gccggatcgc gcacgccggt cagttgttcg attttatcca gcgtctccgg cgtgaccgca
    58861 gggacaatcc gatcaaccat ggttgacgga aatgtcacgt tttgctcgat ccatatcgcc
    58921 agttccgcat ccacctcccg ggcgtaagcc gtcacaacct gacgcgtcac atgcccattt
    58981 tccggcatgt tgtctcagga catcacggta aatgccggta agcctgcggc tttacgacgc
    59041 gctaacgctt cgacaataat acccggtgcc gttagcggtt gatgcggatt ttgcaggtcg
    59101 gcggcaatca tgggatgttc cagcagaagt tgacccgtgg ctggcgaatg acaataccct
    59161 ttctcggtaa tggtcagaga cacaatcgct atttgcggtt cgcacatcgc cgccagcaca
    59221 cgttccagac catcaacctg aacatgcaac gccgctttga cgacgcccac cacacgcgcc
    59281 gtccaggcat ccgccgacat ctccgccacg gtatagaggt tatcctgctg ctttagatcg
    59341 gcaatctgct gttcgccgcc aataagatta acctcataat agccccagtc gctatgctgc
    59401 tccgcagcca gaatatctgt ataaaccccc tgatgcgcgc gatgaaacgc gccaaaaccg
    59461 agatggacca tccgcgccgc cagcgccgcg cgatcgtaat caggaagcgt cgcctttgcc
    59521 gataaaagcc tgttttgcat tttataacct ctatattctg aaagcggaac agtcgcagag
    59581 taacgcctgc cctggtgcat ttggatttac gctaattaaa caaaagtgac cggacagcat
    59641 ggccgaaacc gcattaacgt tccggccata ccgtcgacac gatttaactc gtctgggttg
    59701 cggagtggcg taacttctct gccgctgtcg cttccgccgc atcctcaggc aaactcaggt
    59761 cgcgatctct gacctccggc atcaacagcg cagaaatcag accaatacac gagtagagca
    59821 ccagcataat taagatgggc agccaggaat cggtcatgtt acaaaagatc cctgcgagga
    59881 cggggccaaa gccaaccgcc accaggcctc ctgcctcttt tgaaatcgcc atccgggtga
    59941 agcgattacg cgatccgaaa atttccgcca tggtgatgtt ttccagcgca aataatccca
    60001 gcacggcaaa gttatgaata acaatgagcg ccgccataat tacgccaggg ctatacgttt
    60061 tatctaccac aatagacaac atcggccagg cgagaataat cgcggagata ttcaatatta
    60121 tatacggtag ccgacgaccg tatttatcgg acaaccaccc caagagtggg atagtgataa
    60181 aaccaattac ggaacttatc attaacgcat cggttgggat agatttgtta aataataacg
    60241 tctgaactaa atatccggca aggaaagttt gaataagccc ggaattcccc gcctgcccaa
    60301 aacgtaaacc ggtggccagc cagaaagatt tgctggtaaa catcgcgccc aatgtatttt
    60361 ctgacgcagg cgttaacgct ggcgattttt cgccttcgct tactttttcg aataccggac
    60421 tttctttcag attcattcgc agccagatcg cgaatatcat aacaacgacg ctcgccagga
    60481 aaggaatacg ccatccccag gcgatcagtt gttcgcgttc aagcgcaaag aacatcaccg
    60541 cccagatcgc cgtcgcgctc aacgtaccgc aattggtgcc catcgcgacc agcgaggaaa
    60601 tgatgccacg ctttcctttc ggcgcatact cggccagcat ggtacccgcg ccggaaattt
    60661 ccgccccggc gcccagcccc tgtataattc gcaatgttac cagtaatact ggcgcaaaaa
    60721 tgccgatttg cgcatacgtc ggcagtacgc caatcagcgt ggtgcagatc cccatcatgg
    60781 tgatagtaat aaacaatact ttttttcgtc cgatgcggtc gcccatttta ccaaaaacaa
    60841 aggcgccgat aattctggct atataacctg caccataggt gcccattgcc agaataagcg
    60901 ccatcgcggc agactgttcc gggaaaaata tctcatggaa gaccagagcc gcgcctagtg
    60961 aatataactg aaaatccata aattcaagcg cggtgcctaa ccagccagat acggcagcgc
    61021 gcactaaatc ctgagtcgat cgttcatgct ttatttgtgt catataggca atctctaaga
    61081 ggtaagatgc gtaccactta ctcgcaagta tttatattat ttcgcaaacg tgagtaagac
    61141 tttgcagcat tgacgctggt ctttctcgaa aagctcaatc gcgtcggtga catgttgata
    61201 atcaaatgta tgcgttatca gcttatccgg atcaataagc cctttattca gccagtcaat
    61261 cacgaccggg aatttattgg cattaagacg cgatgaataa atagccagct cttttccggt
    61321 aataccctgc tgtacaatct cacacgggtc gctggaaaat cccatcagga caatgcgtgc
    61381 cgcaggcgat tcttcaatgc gatcaacgac tatgaccgtt ttaacctgat aaaccccctt
    61441 caacgcctgt acggtcgtca gtcccatcgg gcctgcgcca tagataagcg ccacgtcctg
    61501 ctcggtcgga ttcacctgcc ccgtcacatt tgccgcaatg gtaaacggct caaccatgac
    61561 ggcatgatgg tctgcgatgt tgtccggtat gcgatgagca ttacgggccg gcgccaccgc
    61621 atactcgctg aaaccgccgt cacgatgcac gcccagcacc accagcgagg tacacacatt
    61681 gggtttaccg actgaacaag ggtaacaatg cccgcaactg atcaccggat cgacggatac
    61741 ccgttctcct atccggtcgc gattgacgtt gtcgcctacc gcgtcgatga caccgaaaaa
    61801 ttcatggcct atgacacggg gatattttgc aaagggatta tgtccccgat aaatatggct
    61861 gtcggaaccg cagatacccg ccagtttcac tttaatacga acttcgccag atgctggctg
    61921 cagaagcgcg cgcgtttcga tggttaatgt attcggtttt tcgattacga tgcttttcat
    61981 ttttcgctcc ttaccagttc cacagtgtgc cgtcttcaag acgggccacc ggcaaatagg
    62041 ctggatcgta cggatatttc gccgccagtt tttcattaaa ctcaatgccc agtcctggct
    62101 tgtcgcccgg atgcatatag ccgccctcga acgtccagtt atgcgggaaa acctccagca
    62161 tctgttcgga gtagcccata aactcctgca cgccaaagtt aggcacccac aggtcaaaat
    62221 gtaatgccgc ggccatacaa accggcgaca gatcggacgg cccatgcgaa ccggtacgca
    62281 cctggtagag cgaggcaaaa tcggcaatgc ggcgcatccc ggtaatacca ccggcatggg
    62341 taatcgtggt gcggatatag tcaatcaatt gctcttcaat gagctgtttg caatcccaga
    62401 tactgttaaa gacttcgcct acggcaatcg gcgtaaccgt atgctggcgg atcaggcgga
    62461 agcactcctg attttcagcc ggcgtcgggt cttccatcca gaacaaacga tagtcttcaa
    62521 tacatttgcc aaagcgggca gcctcaatag gcgtcagtcg gtgatgcata tcgtgcagaa
    62581 gatgttcatt aaacccgaac gtattacgca cggcgtcaaa cagctttggc gtaaaatcga
    62641 gatacttttc cgttgaccac aattgttctt ccggccactg gccttttgtc gcgggctcat
    62701 aggccagtcc cttacctttc gccatgccgt aggtggtttt catccccgga acgccgcact
    62761 gcacgcggat tgctttgaac ccttgctctt tatgacgcgc gtagtcttcc agcacatcgt
    62821 cgatggtgtg gcctgtagta tggcaataca ccatgacgcc ttcacgagaa gcgccgccga
    62881 gtaactgata caacggcata ttggcggctt tggctttaat atcccatagc gccatatcaa
    62941 ctgcggaaat ggcggacatg gtgacaggac cacggcgcca gtacgcacct ttgtagaaga
    63001 actgccagat atcttcgatg cggtgagcat cccgcccgat gagttgtgga cacagatgat
    63061 cggtaaggta cgaggccacc gagagctcgc gtccgttcag ggtggcatcc cccagaccgg
    63121 tgatcccgtc ttccgtggtt atttttaagg tgacgaagtt acgccctgga cacgtaacaa
    63181 aaacttcagc ccctacaatc ttcattttta ttccttacat cgcattatgg gatgcaggaa
    63241 atttacccaa ctgagctact accatacaag tatatttatc taaaaagcgc tgccagatca
    63301 caaaatgttc tggcagcgcg gcaatgttac gtacgccccc atccaacgac gataatcagc
    63361 attccacaca gcgcgatcag cgcgccgctc cagtcataaa ccgtgagccg gacgccatcg
    63421 acaacacgta accacaggag cgcagtacag acatataccc caccgtaagc cgcataaacc
    63481 cgcccactcg ccgccggatg caaggtcaaa agccagacga ataacgcgag tgacgcggca
    63541 gcgggcagaa gccaccacac gctggcgccg cgcttaatcc atagccaggg aagaaaacat
    63601 ccaatgattt cacagagggc ggtgacaaag aaaagcagag tcgtctttag catgagattc
    63661 atttggttac gaaatgataa gtgataatac aacagaatat cgttacggtt atccggccat
    63721 tcttgtgtat atgccaggca taaggattgg tgtagaattt acaggtggtt taccgctttt
    63781 tcccctctaa tgaaaggatg ttgtgatgaa caatacgctg agcaaacgcc tttgcctgac
    63841 ggcaatgctt acgttggcgg ccgttgtata tactacttcc gcattcgctg aaaccagtaa
    63901 actggtgatt gaatcgggag atagcgcaca aagtcgtcag gaagcggcga tggaaaagga
    63961 acaatggaac gacactcgca gtctgcgtca gaaagtgaat acccgcgcag aaaaagagtg
    64021 ggacaaagcc gatgccgcct ttgataaccg cgataaatgc gagcaaagcg ccaacatcaa
    64081 cgcctattgg gaacccaata ctctgcggtg tctggatcgt cgtacaggtc gcgttattac
    64141 gccctgatgc aggataacta aaaggaagtg taaggataca gtatgacaag tgactacaag
    64201 gtcagactgc gcccgcttga gcgtgaagat ttacgatttg tccaccagct tgataataat
    64261 gccagcgtta tgcgttactg gtttgaagag ccgtatgagg cttttgtcga actgtcggat
    64321 ctctacgaca aacacatcca cgaccaaagc gaacggcgct ttgtcgtcga atgcgacggt
    64381 gaaaacgccg gactggtaga actggtggaa attaaccatg tgcatcggcg ggcggaattt
    64441 cagattatta tttcgccgga gtaccaggga aaaggcctgg cgtcacgcgc ggccaaactg
    64501 gcgatggatt acggatttac cgtactcaat ctctataaat tgtatttgat cgtcgataaa
    64561 gagaatgaaa aagcgattca catctaccgt aaactcgggt ttagagtaga aggcgagctg
    64621 attcatgagt tcttcattaa cggcgaatac cgtaacacca tccgcatgtg tatcttccag
    64681 cagcagtatc tggatgaaca taaaacgtcc agttctacgc tcctgaaacc caccgcgcag
    64741 taagcgcggc gcggtagtca cggagagtcg caccgcgccc ggtttagtag taatcgatac
    64801 gatttttaat ggtgtaatgg tgggacactg ccggcttaac gctctcatcg acgataacaa
    64861 gccggcagtc aacagggttc gcgtacgcat catattcgca gctctgtgtg acgttgccga
    64921 cctgtcgatc atccacccgg ctgactgccg tataatccag ctttttacgg gagtccgtgg
    64981 agagttttgc cgtcacagag agcgtattct gcgagtttat ggttgtctta cctaacggat
    65041 aaccttcgct atcatagcgg tactcgacct tcatctcttt gcccgtcgcc gataccacaa
    65101 aaccgttgtc gtccgtttcc caagtcacgc ccgccgaagg caacgccgcc agctggcact
    65161 tcccctgtaa ctgcaccttt ttttccagcg tctgagcatc ccggtaataa ttagcatcca
    65221 gcacgagcgc cagccccgta ttattctcca gatcgtgtaa ctcaagcgta tcaaaacagc
    65281 cttcctgtga aagcgtaccg gtgacctgct tcgccacttc gccattctca ctcatcaacg
    65341 tctggctgaa atcctttacc ggaccacgta atggatcaaa atcaaattcg ttcgaaaaac
    65401 tggccatttc cggcgtaaaa gactcggggg atttcgggtt atcacaacct gccagtatca
    65461 tgcacaataa cgtcagtaaa aggggtttct tcacgcgtgt caccaggatg aaaagatatt
    65521 tatcatcata ttagcaaata cagttattta cacgaaaaat gctaagctta gaacatcgtc
    65581 attaatcaca ggagttcatg atgaaaatcg caactgcaat agccgctctg gcgttagtca
    65641 gcgccccctc gctggtgatg gcggcaccgg gatcgtgcga gagagtaaaa agcgatatcg
    65701 aacaacgtat catcaataac ggcgtgccgg cggataattt tacgctcact atcgttccta
    65761 tacgaccagg ccgatcagcc ggactcacag gtggtgggcc attgcgcgaa cgacacgcat
    65821 aaaattcttt atacccgcac cagcagcggc aatgcgccag ccaatacctc tcccgctcag
    65881 gacggttcat ccgccgaacc acaataacct cctcctgccc tccgggtccg gagggtaacg
    65941 ctctttgaca tggattaata atccttactc ccaaaggggt aaactcatta catcattagc
    66001 atgttaataa tttcgctata gtcattaata tatagcgaaa cgataacgac aatggagtga
    66061 gtgatgcccg gagaaaagca gcaaacaggc gttagccgca ggacgttagt gaaatcagcg
    66121 gcgcttggct cactggcgct ggctgccgga ggcgtatctt taccgtttgg gatgcgtacc
    66181 gcggccgcgg cggtgcagca ggctatgcgc aacgaagaag ataaaatcgt ctggggcgcc
    66241 tgttcggtca actgcggcag tcgctgcgcc ctgcgtctgc atgtaaaaga taatgaagtc
    66301 tggtgggttg aaactgataa cactggcgac gatgtctacg gcaatcatca ggttcgcgcc
    66361 tgtctgcggg gccgttcaat ccgtcggcgc attaaccatc cggatcgcct taactatccc
    66421 atgaaacgcg ttggccgccg cggcgaaggc aaatttgaac gcattagctg gcaggaagcg
    66481 ctggacacca ttagcgccag cctgaaaaag accgtagaga tctacggcaa tgaagccgtt
    66541 tatatccact attcatccgg catcgtaggc ggcaacataa cccgctcgtc gccttccgcc
    66601 tcgccggtga agcgtttgat gaactgctac ggcggttcgt tgaatcaata cggctcatac
    66661 agtaccgcgc aaatttcttg cgccatgccc tacacctatg gatccaacga cggcaacagc
    66721 acatctgata tcgaaaacag taaactggtg gtcatgttcg gcaataatcc ggctgaaaca
    66781 cgcatgagcg gcggcggcat tacctggttt ctggagcaag cgcgtgaacg ctcaaatgcg
    66841 cgcatgatcg tgatagatcc gcgctatacc gataccgctg ccggacgtga agacgagtgg
    66901 atacctattc gccccggcac cgacgccgcg ctggtggcgg gaattgcctg ggtattgatt
    66961 aacgaaaatc tcgttgacca gccttttctc gacaactatt gcatcggcta cgatgaaaag
    67021 acccttccgg ctgacgcccc ccccaatggc cattataagg cttatatttt gggccagggc
    67081 gaggacggta tcgccaaaac gccgcagtgg gcgtcacaca ttaccggcat ccccgccgat
    67141 cggattatca aactggcgcg cgagataggt agcgtcaagc cggcctacat ctgtcagggt
    67201 tggggcccgc agcgtcaggc gaacggcgaa caaaccgctc gcgccatcgc catgtttccg
    67261 attctgaccg gcaacgtcgg cattcatggc ggtaatggcg gcgcacgcga atccacttac
    67321 accattacca ttgaacgtct gccggtcctg gagaatcccg ttaaaaccgc catctcctgc
    67381 tttagctgga cggacgccat tgcgcgcggc ccggaaatga ccgccctgcg cgacggcgta
    67441 cgcggcaaag ataagctgga tgtcccgatc aaatttctat ggaactacgc tggcaacacc
    67501 ctgattaatc agcattcgga tattaataaa acccatgaaa ttcttcagga tgaagcaaaa
    67561 tgcgaaatga ttgtggtcat cgacaatttt atgacctctt ccgcgaagta cgccgatatt
    67621 ttactgccgg atctcatgac cgtcgaacag gaagatatca tccccaatga ttacgccggc
    67681 aatatgggat atctgatttt tatccaaccg gcgacgacgc ctaagtttga acgcaagccc
    67741 atctactggg tactcagcga aatcgccaga cgcctcggtg acgatgtgta tcagcggttt
    67801 accgaaggcc gtacccaggc gcaatggctg caatatctgt acgccaaaat gcaggcaaga
    67861 gatccggcat tgcccgcgta tgacgagcta aaaaaaatgg gcatctataa acgcaaagat
    67921 cccaacggcc actttgtcgc ctataaaaaa tttcgtgaag atccgcaggc caatccgtta
    67981 aaaacgccgt ccggtaaaat cgaaatctac tcaagcaaac tcgctcacat cgccagtacc
    68041 tgggagctgg cggaaggcga cgtgataagc ccactgccga tttatacccc tacttttgaa
    68101 ggatgggacg atccgaagcg gagcaccttc ccgctacagc tgtttggctt tcactataaa
    68161 tcccgtaccc attcaagcta cggcaatatt gatgttctgc aggccgcctg tcgccaggag
    68221 gtgtggataa atccgcttga tgcgcaaaaa cgtggtatcg cgaatggcga taaggttcgc
    68281 gtctttaacg atcgtggaga agtgcgtcta cccgccaagg tcacgccgcg tattctgccg
    68341 ggcgtcagcg cgatgggtca gggcgcatgg cataatgcgg atatggctgg cgataaaatt
    68401 gaccacggcg cctgcatcaa tacgctcacg acgctgcgtc cttcccccct ggcaaaaggg
    68461 aatcctcaac atacaaatct ggtggaaatc gaaaaaatct aagccgcctg ctccggggcg
    68521 tttttacgcg cccggagctc cccgttttgc gaacacaacg acatttaaaa ctcttttttg
    68581 gatgagcata gtgaggagct gttatgaaaa tcaccaaccc tgaggcatta atggcggcca
    68641 gtatcagccg acgaagcctg gtgaaaacct ccgctatcgg tagccttgcg cttgccagta
    68701 gcgctttcac ccttccgttc tcccgcatcg cccacgccgc agcagacctc gcatctggca
    68761 atatggcaga aaaagcggtc tggagttcat gtaccgttaa ctgcggcagc cgctgcctgc
    68821 tgcgcctgca cgtaaaagat gacaccgtat attgggttga atcagatacc acgggcaacg
    68881 atgaatatgg caaccatcag gtacgcgcct gcctgcgcgg tcgttctatt cgtcgccgga
    68941 tgaatcatcc cgatcgcctg aaatatccga tgaaacgcgt tggtaaacga ggagaaggca
    69001 aattcgaacg tatcagttgg gatgaagcgt tggataccat cggcgataac cttaaacgca
    69061 tcctcaagga ctacggcaac gaagcggtac atgtccttta cggtaccggc gtggacggcg
    69121 gcaatattac caattctaac gtaccgtatc gcctgatgaa cgcctgcggc ggctatctca
    69181 gccgttacgg tagctacagc accgcccaaa tcagcgcggc catgagctat atgttcggcg
    69241 gcaacgacgg caacagtccg gatgatatcg ccaatacaaa actggtggtg atgtttggca
    69301 ataaccccgc ggaaacacgt atgagcggcg gcggcgtgac atactatgtc gaacaggcgc
    69361 gcgaacgctc caacgcccgg atgatcgtca ttgacccgcg ttataacgac actgctgccg
    69421 gccgcgaaga cgagtggctg ccgattcgcc caggtaccga tggcgcgctg gcggcggcaa
    69481 tcggctgggt gctgattacc gaagatctta ttgataaacc gtttctggat aaatactgca
    69541 tcggctacga cgaaaccact ctgcccgcct cggccccgcg taacgcgcac tataaagcct
    69601 atattttggg tcagggcgaa gacggtattg ctaaaacgcc gcaatgggcc gcgcagatta
    69661 ccagtattcc ggcggaaaaa atcattcaac tggcgcggga aatcggctcg gcgaaaccgg
    69721 cttacatttg ccagggctgg ggaccgcaac gccactctaa cggggagcag accgcacgcg
    69781 caatcgccat gttgtctgta ctcaccggta acgtcggcat aaatggcggt aattccggcg
    69841 tgcgcgaagg cacctgggat ctgggcgtcg aatggtttcc tatgctggag aacccggtaa
    69901 aaacccagat ttcggtcttt acctggaccg acgctatcga tcatggcgcg gaaatgaccg
    69961 ccacacgcga cggcgtgcgg ggaaaagaca agctcgacgt gccgatcaaa tttttgtggt
    70021 gctacgccag taatacgctg atcaatcagc atggcgatat cgcccacacc cacgaggtgc
    70081 ttcaggacga cagtaaatgt gaaatgatcg tcggcatcga gcactttatg accgcgtcgg
    70141 caaaatattg cgacattctg ctgcctgatt taatgccgac cgagcaggaa gatctgattt
    70201 cccacgaatc cgcaggcaat atgggctatg tcattcttgg tcagcccgcc acctcgccga
    70261 aatttgaaag aaagcccatt tactggacgc tcagtgaagt ggctaaacgg cttggtccgg
    70321 acgtatacca gaccttcaca gaaggccgca cgcagcatga gtgggtcaaa tacctgcacg
    70381 caaaaaccaa agcgcgtaac ccggaaatgc cggattacga agagatgaaa cagacaggga
    70441 ttttcaagaa aaaatgcccg gaggagcact acgtcgcttt ccgctcattc cgcgaagacc
    70501 ctgccgccaa cccactgaaa acgccgtccg gtaaaatcga aatctattcc gagcgtctgg
    70561 caaccctcgc caacacgtgg gagctgaaga aagatgagat tatccatcct ttacccgcct
    70621 atacgccagg ctttgacggt tgggacgatc cgcttcgtca gcgctacccg ctacagctaa
    70681 ccggcttcca ctataaagcg cgtacccact ccagctacgg caatatcgac gtcctgcaac
    70741 aggcgtgtcc gcaggagatc tggatcaacc cgattgatgc gcaagcgcgc ggcattcagc
    70801 acggcgacac cgtgcgggtc tttaaccaga atggagagat gctcattccg gcaaaagtca
    70861 cgccgcgcat attgcctggc gtcaccgcta tcggccaggg cgcctggtta aatgccgaca
    70921 tgtttggcga caaagtcgat cgcggcggct ccattaacat tctgacgtcg caccggcctt
    70981 ccccactggc gaaaggtaat ccgtcacaca gtaatcttgt tcaggttgaa aaggcgtaag
    71041 gagtaaccga tgacaaccca gtatggattt tttattgatt ccagccgttg caccggttgc
    71101 aaaacctgcg aactggcctg caaggactac aaagatctca ctcccgacgt cagcttccgc
    71161 cgcatttatg agtatgcggg cggtgactgg caggaagata acggcgtctg gcaccagaac
    71221 gtctttgcct actatctctc catctcctgt aaccactgcg aagacccggc ctgtaccaaa
    71281 gtctgcccga gcggcgcgat gcacaagcgc gatgacggtt ttgtggtggt gaatgaagag
    71341 gtctgtatcg gctgccgcta ctgccacatg gcctgcccgt acggcgcgcc gcagtacaac
    71401 gcggccaaag gtcatatgac caagtgcgac ggctgttatg accgggtggc ggaaggcaag
    71461 aaaccgattt gcgtggaatc ctgcccgctg cgggcgctgg atttcggccc gatagacgaa
    71521 ctgcgcaaaa aacacggtga gctggctgcc gtcgcgccgt tgccgcgcac gcatttcacg
    71581 aagccgaata ttgtgattaa acccaacgcc aacagccgcc cgaccgggga caccaccggt
    71641 tatctggcca atccgaagga ggtataagat gggaagtgga tggcatgaat ggccgctggt
    71701 cctgtttacg gtgctgggtc aatgtgtggc cggggcgctg atcgtgagtg gatatggctg
    71761 gttaaccacc aaagacgatg tggcaaaaca acgcatcgtg cgcagcatgt tttttctgtg
    71821 gctggtgatg ggactgggat tcctcgcgtc gattatgcat ctcggcttgc cgatgcgcgc
    71881 gtttaactcg cttaaccgcg taggcgcttc cgcactgagt aatgaaatcg ccgcaggatc
    71941 ggtgttcttt gccgtaggcg gcatctggtg gctggtggcg gtactcggta aaatgccccc
    72001 ggcgctgggt aaagtgtggc tgctggtcag tatggcgctc ggcgttgcat tcatctgggc
    72061 aatgacgctc gtttatcaga tagataccgt gccaacctgg tataatggct acaccacgct
    72121 ggcctttttc ctcacggcat tcctgtgcgg tccggtgttt gcggcgctac tgctacgcat
    72181 cgcgcgcgtc ccattttgca gcgtgacgtt tgccagtatt agcggcctgg cgttggtggt
    72241 gtgcgtggcg gtcatcgtac tacagggact gtccctctca gccattcaca gttccgtgca
    72301 acaggccagc catctcgcac cggattacgg tatgctacag gtctggcgca ttgtcttgct
    72361 tgctgccgga ttaggttgct ggctatgtcc actaatccgt cgccgcgaac cgcataccgt
    72421 tggtttgctg ctcggtgtcg tactggtgct ggcgggcgaa attattggcc gcggactttt
    72481 ttatggcctg catatgaccg taggtatggc cgtcgcaggt taatttatgc gtgcggggcg
    72541 acccgcacct ttcgggattg tttgaatgac cactttttta caacgtgatg attttgcagt
    72601 aacggcgcgt gttcttggcg cgttgtttta ttattcgccg gaaagccacg aaaccgctcc
    72661 tctggtccag gcgctattaa acgacgactg gcaggcgcag tggccgcttg atgccgaggc
    72721 gcttgcacct gtggcggcta tgtttaagac ccacagcgaa gagtcgttgc cacaagcctg
    72781 gcagcgcctg tttatcggcc cttacgctct gccgtctccg ccgtggggtt ccgtctggct
    72841 ggatcgtgag agcgtattat ttggcgattc tacgttggcg ctacgtcagt ggatgcgcga
    72901 aaacgggatt cagtttgaaa tgcagcaaaa cgagccagaa gatcattttg gggcgctgtt
    72961 gttgctggcg gcctggcttg ccgagaatgg ccgtcatcat gaatgcgaac aactcctggc
    73021 ctggcatctg tttccgtggt cgccccgctt tctggacgta tttatcgatc atgccgggca
    73081 tccgttttat caggcgttgg ggcaactggc gcgtctgact ctggcgcaat ggcaagctca
    73141 actcattatt cccgtcgctg taaaaccgtt attccgttaa tccccacaaa aggcaggatt
    73201 ttacctgcct tttctcccat tgtggcctat ttttacctac aaaaagtgac aacgtcacac
    73261 ctcgcttcta tttttaagat aattctttat cgtgaatgtt cacgctaagc cgcataaggg
    73321 caaaacataa ttgttaatag atgtttaaca gtgttaaaca tcacgctccg ctggaatcct
    73381 tcccaacctg ttgctatagc tcaaagcacc ctgccggaac atggcataac aacacgcgac
    73441 tcttaacgtc gccataacac atgcaaacag ggagacacac cgcaatgcac atcctcaccc
    73501 taaaacgcgt acttgggttc actatcgtca ttctgctgtt actggcgctg tttatctggg
    73561 gaatcggtct ggagacgctg aaagcgcgtc aggtcgatct gctgtatctc ggacaacggc
    73621 atttgatgct ggtctttacg tccatgtttt ttgctttact ggtcggtatc ccgagcggga
    73681 ttttactcag ccgacctgcg gcaaaaggat ttgctgaata tgtcatgcaa atctttaatg
    73741 ttggtaatac cttgccgcca ctggccgtcc tggccttagc gatggtgatt atcgggatcg
    73801 gcgatacgcc cgccattgtc gcgctatttc tggcttctct tctgcctatc gtccgcaata
    73861 cctatgcagg cctctgttcc gttcccgcct cactgattga agcggcgaac gggattggga
    73921 tgacaaaatg gcagcggctt cgccaggtag agctacctaa tgcgtggcca gtgatgctgt
    73981 ccggtattcg catcgcgacc gccatcaatg tcggcaccgc gccgctggcc tttctgatcg
    74041 gcgccagcag ctacggcgag ctgatttttc cggggattta tctcaacgat tttccgacgt
    74101 tgattctcgg cgcaacggcc acggcgttat tcgcgctgat tcttgacact ctgcttgcct
    74161 ggtttgggcg acgccttagc cctcataccg tctgaacgca taaataacaa taaggagcgt
    74221 taaatgagat tcaaaaaaca cctgttggga tggcttgcca caacgctgtt gttcagtagc
    74281 cagacgcagg ccgcgccgct ggttctcgcc accaaaagct ttaccgagca gcatattctt
    74341 tccgctatga ccgttcagta tttgcagaag aaaggctttc aggttcagcc gcaaaccaat
    74401 atcgccgcgg tgatttcacg taatgcgatg gtgaataaac aaattgatat tacctgggaa
    74461 tataccggta catcgctgat tattttcaac cgtatcgata agcgcatgag tccacaggaa
    74521 acctacgaca cggtaaaacg cctggatgcg aagctgggcc tggtatggct caaaccggct
    74581 gacatgaaca atacttacgc gttcgcgatg cagcgtaaac gcgccgagtc ggaaaatatc
    74641 accaccatct cgcaaatggt ggcaaaaatc gaacaagtcc ggcagaacga tcctgaccac
    74701 aactggatgc tcggcctcga tctggaattt gccgggcgca gcgacgggat gaagcccctt
    74761 cagcaagcct accagatgca gctcgatcgc ccgcaaatac gacagatgga cccagggctg
    74821 gtctataacg ccgttcggga tggactggtt gacgccgggc tggtctatac caccgacgga
    74881 cgggtgaaag ggtttgatct gaaagtgttg gaagatgata aaggcttctt tccaagttac
    74941 gctgtcacgc ccgtggtgcg taaagaggtg ctggaagcca atcctggtct tgatgacgcc
    75001 ttaaacaccc tttccggcct gctcaataac gatgtgatat cgaccctaaa cgcccaggtc
    75061 gatatcgagc atcgcacgcc gcaacaggta gcccatcaat ttttgcagga caaaggtctg
    75121 ctgtaaggag cgcctatgga tacgatacat tatatgctgg ataacgcagg ctatctcgcc
    75181 agccttacct ttcagcatct ctggctagtc gcgctggccg tcggtctggc gattatcatc
    75241 ggcgtaccgt taggcgtttt gattgtacgc cacaaatggc tggcaacgcc ggtattgggc
    75301 gccgccacgc tacttcttac cattccgtct atcgcgctgt ttggattaat gatcccgctc
    75361 ttttcgctga tcgggcatgg tattggcgtt ctgcccgctg tgacggccgt ttttctctac
    75421 tctttactgc cgattgtccg gaatacccat actgcgcttg atagtttgcc gcccggtctg
    75481 cgtgaagcgg gacgcggcat cggtatgact ttctggcaac ggctgcgctg ggtcgaaatc
    75541 ccaatggccc taccggttat tttcgggggt atccgcaccg cggtagtgat gaatatcggc
    75601 gtgatggcga ttgccgcggt gatcggcgcc ggcggtctgg ggctgctact gttaaacggc
    75661 attagcggca gcgatattcg catgttaatt gccggcgcgc tgatgatctg tctactggca
    75721 attgtacttg actggctgtt gcatcgtctg caagtcgtac tggcacctaa ggggatacga
    75781 taatgataaa actggaaaat ctcaccaaac aatttgtaca gaaaaagggt cagccgctaa
    75841 aagccgtcga caacgtcaac ctgaacgtgc cggaaggcga aatgtgcgtc ttactcggtc
    75901 cctccggctg cggcaaaacc accacgttaa agatgatcaa ccggctgatc gcgcccagca
    75961 gcggtaatat tcttatcaac ggcgagaata ccaacgatat ggatacggta acgctacgcc
    76021 gcaatattgg gtatgttatc caacagatcg gcctgtttcc taatatgacg attgaagaaa
    76081 atattaccgt tgtgccgcgc atgttgggtt gggacaaagc gcgctgcaag caacgcgccg
    76141 aagagttgat ggacatggtg gcgctggatg ccagaaaatt tctgcatcgc tatccaaagg
    76201 agatgtccgg gggacagcaa cagcgtattg gcgtgatccg cgctctggcc gccgatccgc
    76261 cggtactgct gatggatgag cccttcggcg cggtggaccc cattaaccgc gaagtgatcc
    76321 agaaccagtt tctggatatg cagcgtaagc taaaaaagac cgtgatgctg gtcagccatg
    76381 atatcgacga agcgctaaaa ctcggcgacc gtatcgccgt gttccgtcag gggcgaattg
    76441 tacagtgcgc cagtcctgat gaactgctgg ccaagccggc taacgagttt gtcgggtcgt
    76501 ttgtcggtca ggacagaacg ttaaagcgtt tgctactggt ctccgcaggc gatgtgaccg
    76561 accaacagcc aaccattacc gcgcggcctt ccatgccgtt aagcgaggcg ttcggcatta
    76621 tggatgatca cgatattcgc gccattaccg tcattgacaa cgacggtaag ccactgggat
    76681 ttgtgaagcg ccgggaggcg cggaacgcca gcggaatctg cgccgatatc acccatcctt
    76741 tccgtattac gggcaaagcg gaagataatc tgcgtattgt gctgtccaga ttgtacgaaa
    76801 gtaataccag ctggatgccg atcgttgatg aagacggacg ctataacggt gaaatctctc
    76861 aggattacat cgccgattat ctcagctcag gccgcactcg tcgggcgcta aatattcacg
    76921 aaagcagcta acgttgccgc cggatcgcct ctcgctatcc ggcagtatca ttattgtacg
    76981 caatattata tcgcacatag tgcttttgcg tctgacgcca tttccccgca gaataggcta
    77041 tcctgaaact ccctgtttac ccgctcatgc atcgtttaca cgcttacccg gatctgcgcg
    77101 cgatgtttcg tcgcctgctg atcgctacgc tcatcggtat tctcgcggcg ctggctgtcg
    77161 ccgccttccg tcatgcgatg caattgctgg agtggatttt cctgagtaat gacaccggca
    77221 gtctggtgaa tgcggctgag gggctttcgc cctggcgacg gctgattacg ccggcgcttg
    77281 gcggcctggc cgctggtctg ttgctgtggg ggtggcaaaa aa
//
LOCUS       DAGWFR010000005        74601 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.005, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000005 DAGWFR010000000
VERSION     DAGWFR010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 74601)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 74601)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..74601
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.005"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..592)
                     /gene="ydiK"
                     /locus_tag="MOX77_000357"
     CDS             complement(<1..592)
                     /gene="ydiK"
                     /locus_tag="MOX77_000357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter YdiK"
                     /protein_id="HCA3356022.1"
                     /translation="MVNVRQPRDIAQVLLSVLFLAIMIVACLWIVQPFILGFAWAGTI
                     VIATWPVLLKLQKILWGRRSLAVLVMTLLLVLLFVIPVALLVNSIVDGSGPLIHAVTG
                     GDMTLPDLAWLNNIPLVGAKLYAGWHSLLDMGGSAIMAKVRPYIGTTTIWFVGQAAHI
                     GRFMMHCALMLLFSALLYWRGEQVAMGIRHFACRLAA"
     gene            857..3913
                     /locus_tag="MOX77_000358"
     CDS             857..3913
                     /locus_tag="MOX77_000358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HCA3356023.1"
                     /translation="MIPQISQAPGVVQLVLNFLQALEQQGFTGDTATSYADRLTMSTD
                     NSIYQLLPDAVVFPRSTADVALLARLAAEPRFTSLIFTPRGGGTGTNGQALNQGIIVD
                     MSRYMNRIIEINPEEGCVRVEAGVIKDQLNQALKPYGYFFAPELSTSNRATLGGMINT
                     DASGQGSLVYGKTSDHVLGIRAVLLGGDILDTQSMPVDLARTLGENTTTPGRIYQTVY
                     QSCLENRQLILDSFPKLNRFLTGYDLRHVFNDDMTRFDLTRILTGSEGTLAFITEARL
                     DITPIPKVRRLVNVKYDSFDSALRNAPFMVDARALSVETVDSKVLNLAREDIVWHSVS
                     ELITDVPDKEMLGLNIVEFAGDDEALIDGQVEALCHRLDGLMARAEAGVIGWQLCTDL
                     TGIERIYAMRKKAVGLLGNAKGAAKPIPFAEDTCVPPEHLADYIAEFRALLDGHGLSY
                     GMFGHVDAGVLHVRPALDMCDPQQELLMKQISDEVVALTARYGGLLWGEHGKGFRAEY
                     SPAFFGEVLYGELRKIKAAFDPHNRLNPGKICPPQGIEAPMMKVDAVKRGTWDRQIPL
                     AVRQTWRGAMECNGNGLCFNFDAKSPMCPSMKISLNRIHSPKGRATLVREWLRLLADR
                     GVDPLKLEKELPEKRASLRTLIARTRNSWHKRKGEYDFSHEVKEAMSGCLACKACTTQ
                     CPIKIDVPEFRSRFLQLYHTRYLRPVRDHLVATVETYAPLMARAPKTFNFFINQPVVR
                     NLAKKHIGMVDLPLLSAPSLQQQLVGHPSANMTLEQLERMSAEQKAKTVLVVQDPFTS
                     YYDARVVADFIRLAEKLGRRPVLLPFSPNGKAQHIKGFLNRFAKTAKKTSEFLNRIAA
                     LGMPIVGVDPALVLCYRDEYKLALGEQRGDFHVLLVNEWLAQEINARLSVEVSGEPWY
                     FFGHCTEVTALPGAPAQWAAIFAHFGAKLENVSVGCCGMAGTYGHELTNHKNSLGIYE
                     LSWHQAMQRLPRNRCLATGYSCRSQVKRIEGTGVRHPLQALLEIIG"
     gene            3910..4320
                     /gene="menI"
                     /locus_tag="MOX77_000359"
     CDS             3910..4320
                     /gene="menI"
                     /locus_tag="MOX77_000359"
                     /EC_number="3.1.2.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoyl-CoA hydrolase"
                     /protein_id="HCA3356024.1"
                     /translation="MIWKREVTLDALNAMGEGNMVGLLDIRFERIGDDTLEATMPVDH
                     RTKQPFGLLHGGASVVLAESIGSVAGYLCTQGEQKVVGLEVNANHVRSARQGRVRGVC
                     KALHTGARHQVWQIEIFDEQGRLCCSSRLTTAIV"
     gene            4419..4607
                     /locus_tag="MOX77_000360"
     CDS             4419..4607
                     /locus_tag="MOX77_000360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416200.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdiH family protein"
                     /protein_id="HCA3356025.1"
                     /translation="MSIDLDPTQLAIEFLRRDKTELSPAQYLKRLKQLELEFADLLTL
                     SATELKEEIYFAWRLGVH"
     gene            complement(4895..6241)
                     /locus_tag="MOX77_000361"
     CDS             complement(4895..6241)
                     /locus_tag="MOX77_000361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-cystine transporter"
                     /protein_id="HCA3356026.1"
                     /translation="MVVTLAYIALFLVFSWAILRINQKSDSLSKSVFIAIFLGAVIGL
                     SLHFISANHTKTIIEWYSIVGNGYVHLLKLVAIPLIFISILSAINKLENSAGIGKMSL
                     TIVGCMLCLVMVAGFIGLLTAHILGLDASAFVHMPSMLTTEEVNKTAAVSIPQLVTSL
                     IPTNIFLDLTGARSVSVIGIVIFTLIAGIALLKVKKEAPEEGQKLSAGINAIQIWVMK
                     MVRIVIALTPYGVMALMTTVFSSYRLEQFASLLGFIGACYIAIFMMFIVHAILLILSG
                     NNPAHYFRMVWPVLTFAFVSRSSAASIPLAISAQEKFGVQSTIANISASFGSSMGQNG
                     CAGIYPAIMVAMIAPTIGIDPLSLHFLAAMLPAIALGSIGVAGVGGGGTFAALIVLST
                     LNFPVALVGIFIAIEPIVDMARTALNVNGSMMSGVLANRILNNNRADDMPAVIDRP"
     gene            6668..7036
                     /gene="sufA"
                     /locus_tag="MOX77_000362"
     CDS             6668..7036
                     /gene="sufA"
                     /locus_tag="MOX77_000362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly scaffold SufA"
                     /protein_id="HCA3356027.1"
                     /translation="MELHSGTFNPEDFPWQGLTLTPAAAAHIRELAAKQPGMLGVRLS
                     VKQTGCAGFGYVLDTVREPDKDDLVFEAEGAKLFAPLQAMPFIDGTEVDYVQEGLNQL
                     FKFHNPKAQNECGCGESFGV"
     gene            7045..8532
                     /gene="sufB"
                     /locus_tag="MOX77_000363"
     CDS             7045..8532
                     /gene="sufB"
                     /locus_tag="MOX77_000363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufB"
                     /protein_id="HCA3356028.1"
                     /translation="MSRNTEATEEVGIWTGGRLNYKEGFFTQLPTDELAKGISEEVVR
                     AISAKRNEPDWMLEFRLNAYRAWLDMDEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDS
                     CVSQPGAVQQTGANTFLSKEVEDAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLA
                     EQGIIFCSFGEAIHDHPDLVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCP
                     MELSTYFRINAEKTGQFERTILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKD
                     AEVKYSTVQNWFPGDNNTGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCIL
                     RGDNSIGEFYSVALTSGHQQADTGTKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKI
                     MPTATNARNFTQCDSMLIGADCGAHTFPYVECRNNSAQLELEATTSRIGEDQLFYCLQ
                     RGISEEDAISMIVNGFCKDVFSELPLEFAVEAQKLLAISLEHSVG"
     gene            8549..9295
                     /gene="sufC"
                     /locus_tag="MOX77_000364"
     CDS             8549..9295
                     /gene="sufC"
                     /locus_tag="MOX77_000364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008500629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly ATPase SufC"
                     /protein_id="HCA3356029.1"
                     /translation="MLSIKDLQVSVEEKAILRGLNLDIRPGEVHAIMGPNGSGKSTLS
                     ATLAGREDYEVTGGSVTFKGKDLLELSPEERAGEGIFMAFQYPVEIPGVSNQFFLQTA
                     LNAVRAYRGQASLDRFDFQDLMEEKIALLKMPEDLLTRSVNVGFSGGEKKRNDILQMA
                     VLEPELCILDESDSGLDIDALKIVAEGVNALRDDKRAFIIVTHYQRILDYIKPDYVHV
                     LYQGRIVRSGDFTLVKQLEEQGYGWLTEQQ"
     gene            9270..10541
                     /gene="sufD"
                     /locus_tag="MOX77_000365"
     CDS             9270..10541
                     /gene="sufD"
                     /locus_tag="MOX77_000365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufD"
                     /protein_id="HCA3356030.1"
                     /translation="MAGLPNSSKALQQWQHLFEEKGEIRTEQARQHFQQMLRLGLPTR
                     KHEDWKYTPLEGLTHSQFIQQCATISAAQRDALALQIDAVRLVFVDGRFMPELSDSTQ
                     NSGFDVSVRDERQTLAAPVHPEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHITQG
                     VDSDELNTAHYRHHLTLAEGAEATVIEHYVSLTAAKHFTGARLTMNVADNAQLRHIKL
                     AFENASSYHFAHNDLLLATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMP
                     VKNEVCDTRTWLEHNKGYCNSRQLHKTIVSDKGRAVFNGLINVAQHSIKTDGQMTNNN
                     LLLGKLAEVDTKPQLEIYADDVKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYA
                     FAAELTEAIHDSALKQQVLARIGQRLPGGLV"
     gene            10538..11758
                     /gene="sufS"
                     /locus_tag="MOX77_000366"
     CDS             10538..11758
                     /gene="sufS"
                     /locus_tag="MOX77_000366"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase SufS"
                     /protein_id="HCA3356031.1"
                     /translation="MTFPVEKVRADFPILQREVNGLPLAYLDSAASAQKPNQVIDAES
                     AFYRHGYAAVHRGIHTLSAQATESMENVRKQASRFINARSAEELVFVRGTTEGINLVA
                     NSWGTENIRAGDNIIISEMEHHANIVPWQMLCERKGAELRVIPLHPDGTLRLETLAAL
                     FDDRTRLLAITHVSNVLGTENPLPDMIALARQHGAKVLVDGAQAVMHHAVDVQALDCD
                     FYVFSGHKLYGPTGIGILYVKEALLQEMPPWEGGGSMISTVSLTQGTTWAKAPWRFEA
                     GTPNTGGIIGLGAAIDYVTSLGLDKIGDYEQMLMRYALEQLAQVPDITLYGPAQRLGV
                     IAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAWYGVPAMCRASLAMYNTHEEVD
                     RLVAGLTRIHRLLG"
     gene            11771..12187
                     /gene="sufE"
                     /locus_tag="MOX77_000367"
     CDS             11771..12187
                     /gene="sufE"
                     /locus_tag="MOX77_000367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfuration protein SufE"
                     /protein_id="HCA3356032.1"
                     /translation="MAALPDKEKLLRNFTRCANWEEKYLYIIELGQRLAELNPQDRNP
                     QNTIHGCQSQVWIVMRRNANGIIELQGDSDAAIVKGLMAVVFILYHQMTAQDIVHFDV
                     RPWFEKMALTQHLTPSRSQGLEAMIRAIRAKAATLS"
     gene            12342..13342
                     /locus_tag="MOX77_000368"
                     /pseudo
     CDS             12342..13342
                     /locus_tag="MOX77_000368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460340.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
     gene            complement(13409..13648)
                     /locus_tag="MOX77_000369"
     CDS             complement(13409..13648)
                     /locus_tag="MOX77_000369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="major outer membrane lipoprotein"
                     /protein_id="HCA3356033.1"
                     /translation="MNRTNKLILGAVVLGSTLLAGCSSNAKIDQLSSDVQTLSAKVDQ
                     LSNDVNAMRSDVQAAKDDAARANQRLDNKVFRICK"
     gene            complement(13731..13967)
                     /gene="lpp"
                     /locus_tag="MOX77_000370"
     CDS             complement(13731..13967)
                     /gene="lpp"
                     /locus_tag="MOX77_000370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein lipoprotein Lpp"
                     /protein_id="HCA3356034.1"
                     /translation="MNRTKLVLGAVILGSTLLAGCSSNAKIDQLSSDVQTLNAKVDQL
                     SNDVNAMRSDVQAAKDDAARANQRLDNQATKYRK"
     gene            complement(14278..15690)
                     /gene="pykF"
                     /locus_tag="MOX77_000371"
     CDS             complement(14278..15690)
                     /gene="pykF"
                     /locus_tag="MOX77_000371"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010346010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase PykF"
                     /protein_id="HCA3356035.1"
                     /translation="MKKTKIVCTIGPKTESEEMLSKMLDAGMNVMRLNFSHGDYAEHG
                     QRIQNLRNVMSKTGKKAAILLDTKGPEIRTIKLEGGNDVSLKAGQTFTFTTDKSVVGN
                     NEIVAVTYEGFTSDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNL
                     PGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVVEIREHLKAHGGENIQII
                     SKIENQEGLNNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVIT
                     ATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICER
                     TDRVMNSRLDYNNDSRKLRITEAVCRGAVETAEKLEAPLIVVATQGGKSARAVRKYFP
                     DATILALTTNEVTARQLVLSKGVVSQLVKEINSTDDFYRLGKDVALQSGLAQKGDVVV
                     MVSGALVPSGTTNTASVHVL"
     gene            complement(16092..17435)
                     /locus_tag="MOX77_000372"
     CDS             complement(16092..17435)
                     /locus_tag="MOX77_000372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HCA3356036.1"
                     /translation="MKKVKKLSLTDLVLYGLVFMVPIAPVSLYGVVYNLSHGMVALVY
                     IIGAIAMFFTAYSYSTLSQHISSSGSAYAYAGVCINPAVGFLTGWILLLDYLLFPTLV
                     AVLGGVAVHAILPQIPVWVWPLIYVAIGTGVNYLGIQQTAKFDKLLVFIQLGILAIFV
                     LLIIRLMMQDSSQITLSFRPFFDSQWFTPGLIATAISVAALNFLGFDAISTLSEESEG
                     GGRAVSKATLLALVLATVLFIIVVAFAAFATGNVDRFAEGNATNEAFFTIAGNVGGIW
                     LKVAFSIIVAFVCAVGNIITAQTAVSRVLFSMGRDRMLPAFLAHVHTTRKTPDYAILF
                     TGGVTLLLSYLFSGKIESISTLVNFGALFAFFVVNLCVFILFNFRMKAQRRIFAHVIS
                     PIMGMIVIGYVCLNMNIHALILGISWAAIGIAILCYRKAYNQNIAIDLEGKKLLD"
     gene            complement(17457..18145)
                     /locus_tag="MOX77_000373"
                     /pseudo
     CDS             complement(17457..18145)
                     /locus_tag="MOX77_000373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460345.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
     gene            complement(18204..18941)
                     /locus_tag="MOX77_000374"
     CDS             complement(18204..18941)
                     /locus_tag="MOX77_000374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytoplasmic protein"
                     /protein_id="HCA3356037.1"
                     /translation="MKILFIGESWHIHMIHSKGFDSFTSSKYEEGADYLLSCLRQGNI
                     DVDYMPAHIVQTRFPQTAEALACYDAIVISDIGSNTFLLQNRTFYNMDIIPDALQLIA
                     DYVAEGGGLLMIGGYLSFTGIEAKANYKNTVLAEVLPVDMLDVDDRVELPQGCKAVNT
                     AVKHVITQPFSEWPPLLGYNKLIAKENSQVLAEINGDPLLVMGTYHKGKVCCFASDCS
                     PHWGSPQFLQWEHYATFWCNVLHTIKK"
     gene            complement(18953..20171)
                     /locus_tag="MOX77_000375"
                     /pseudo
     CDS             complement(18953..20171)
                     /locus_tag="MOX77_000375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460347.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR family transcriptional regulator"
     gene            complement(20494..23556)
                     /gene="ttrA"
                     /locus_tag="MOX77_000376"
     CDS             complement(20494..23556)
                     /gene="ttrA"
                     /locus_tag="MOX77_000376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetrathionate reductase subunit TtrA"
                     /protein_id="HCA3356038.1"
                     /translation="MANLTRRQWLKVGLAVGGMVTFGLSYRDVAKRAIDGLLNGTSGK
                     VTRDRIFGNALIPEAQAQTHWQQNPQQTIAMTQCFGCWTQCGIRARVNADGKVIRIAG
                     NPYHPLSQEHPIDSSVPFSEAMEQLAGESGLDARSTACARGATLLESLYSPLRLLEPM
                     KRVGKRGEGKWQRISFEQLIEEVVEGGDLFGEGHVDGLRAIHAPDTPIDAKHPSFGPK
                     TNQLLVTNTSDEGRDAFLRRFALNSFGSKNFGAHGAYCGLAYRAGSGALMGDLDKNPH
                     VKPDWENVEFALFMGTSPAQSGNPFKRQARQLASARLRENFQYVVVAPALPLSTVLAD
                     PRGRWQPVMPGSDSALAMGMIRWIMDNQRYNADYLAIPGVQAMQQAGEQSWTNATHLV
                     IADELPTLAGQHLTLRHLTPDGEETPVVLNTDGELVDASTCRQARLFVTQYVTLADGQ
                     RVTVKSGLQRLKEAAEKLSLAQYSEQCGVPEAQIIALAETFISHGRKAAVISHGGMMA
                     GNGFYNTWSVMMLNALIGNLSLSGGVFVGGGKFNGVSDGPRYNMNSFAGKVKPSGLSI
                     ARSKTAYKASEEYRDKIAGGQSPYPAKAPWYPFVAGQLTELLTSALEGYPYPLKAWIS
                     NMSNPFYGVPGLRAVAEEKLKDPRRLPLFIAIDAFMNETTALADYIVPDTHNFESWGF
                     TAPWGGVASKATTARWPVVAPATHRTADGQPVSMEAFCIAVAKRLHLPGFGDRAITDP
                     QGNTFPLNRAEDFYLRVAANIAFMGKTPVALANQEDISLTGVSRILPAIQHTLKADEV
                     GRVAFIYSRGGRFAPEDSGYTEQRLGNAWKKPLQIWNADVAAHRHAITGERFSGCPVW
                     YPARLSDGRAIDDQFPIGQWPLKLISFKSNTMSSSTAVIPRLHHVKPANLVALNPQDG
                     ERYGLQHGDRVRIITPGGQVVAQISLLNGVMPGVIAIEHGYGHREMGATQHSLDGVPM
                     PYDPQIRAGINLNDLGFADPTRTITNTWLDWVSGAAVRQGLPAKIERI"
     gene            complement(23549..24571)
                     /gene="ttrC"
                     /locus_tag="MOX77_000377"
     CDS             complement(23549..24571)
                     /gene="ttrC"
                     /locus_tag="MOX77_000377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetrathionate reductase subunit TtrC"
                     /protein_id="HCA3356039.1"
                     /translation="MTHSLIIEEVLAHPQDISWLPWAVQYFFFIGIAACAALFACYLH
                     WRKKDAATEENRALLIAITCAITAPLALTADLHQTARVWHFYAWPTPWSWMPWGALFL
                     PLFTGFLALWFLAQQIKRLFNKSYNVTKWLALASALCAVGLLIYTGREVSVVLARPIW
                     FSYAFPVAMFLSALQAFFALMIVAARRDSVRLPKILWGQLWTLAALGLVVAMWVSGDT
                     LSGTAIRQWITVALSAKYYAVGWLALWVFTLLFCSLALRHPLSELRRVLLVLSALALC
                     WLMRWTLLIQVQTVPKFNAQFNPYTLPGGTDGWLAILGTFGLWIALLISIRETLNGLT
                     RRLQHG"
     gene            complement(24572..25324)
                     /gene="ttrB"
                     /locus_tag="MOX77_000378"
     CDS             complement(24572..25324)
                     /gene="ttrB"
                     /locus_tag="MOX77_000378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetrathionate reductase subunit TtrB"
                     /protein_id="HCA3356040.1"
                     /translation="MWTGVNMDSSKRQFLQQLGVLTAGASLVPLAEAKFPFSPERHEG
                     SPRHRYAMLIDLRRCIGCQSCTVSCTIENQTPQGAFRTTVNQYQVQREGSQEVTNVLL
                     PRLCNHCDNPPCVPVCPVQATFQREDGIVVVDNKRCVGCAYCVQACPYDARFINHETQ
                     TADKCTFCVHRLEAGLLPACVESCVGGARIIGDIKDPHSRIATMLHQHRDAIKVLKPE
                     NGTSPHVFYLGLDDAFVTPLMGRAQPALWQEV"
     gene            25488..27266
                     /gene="ttrS"
                     /locus_tag="MOX77_000379"
     CDS             25488..27266
                     /gene="ttrS"
                     /locus_tag="MOX77_000379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     TtrS"
                     /protein_id="HCA3356041.1"
                     /translation="MRGKTVRRLAVLAAVGLLCHGAWAGTWNIGILAMRGEASTRSHW
                     QPLAKTLSQQLPGETFHIQPLDLHQMQEAVNQGTVQFVITNPAQFVQLNSHAPLRWLA
                     SLRSTRDGKAVSNVIGSVILTRRDSGITTAHDLIGKTVGAIDAQAFGGYLLGYKALSD
                     AGLRPERDFHLRFTGFPGDALIYMLREKAVQAAIVPVCLLENMDQEGLINKKDFIALL
                     SRPTPLPCLTSTPLYPDWSFAALPAVSDALADRVTRALFNAPAAASFHWGAPASTSQV
                     EALLRDVRQHPQQRRLWLDVKSWLIQHQLMVGGVILAFLLLTLNYIWVMLLVRRRGKQ
                     LERNSVVLHQHERALETARQMSVLGEMTSGFAHELNQPLSAIRHYAQGCLIRLRAADE
                     QHPLLPALEQIDQQAQRGADTLRNLRHWVSQAQGNPVLTEAWKAIAIREAIDHVWQLL
                     RMAQQFPTVTLHTEVSAALRVTLPSVLLEQVLANIILNAAQAGATHLWVVAERTENGI
                     SIVLQDNAGGIDEALLRQAFQPFMTTRKEGMGLGLAICQRLVRYGRGDISIRNQTAPD
                     GLSGTVVTIHFLHEHGGRDGDNSSTG"
     gene            27241..27861
                     /gene="ttrR"
                     /locus_tag="MOX77_000380"
     CDS             27241..27861
                     /gene="ttrR"
                     /locus_tag="MOX77_000380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460352.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator TtrR"
                     /protein_id="HCA3356042.1"
                     /translation="MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLY
                     QAGVVLLDMRMPVLDGQGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQK
                     PVSVKPLQAALERALTVSSAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAM
                     NIAVRTVEVHRARVMEKMQAGSLAELIRRFEKMASPETRIRTTYEP"
     gene            27959..28171
                     /gene="fumD"
                     /locus_tag="MOX77_000381"
     CDS             27959..28171
                     /gene="fumD"
                     /locus_tag="MOX77_000381"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate hydratase FumD"
                     /protein_id="HCA3356043.1"
                     /translation="MTKPTKDDELYREMCRVVGKVVLEMRDLGQEPKYIVIAGVLRTA
                     LANQRIQRSALEKQAMETVINALARS"
     gene            complement(28267..29226)
                     /locus_tag="MOX77_000382"
     CDS             complement(28267..29226)
                     /locus_tag="MOX77_000382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF523 and DUF1722 domain-containing protein"
                     /protein_id="HCA3356044.1"
                     /translation="MNNKPVVGISGCLTGAAVRFDGGHKRMDFVMNSLAPWVAYKPIC
                     PEVAIGLPVPRPALRLIQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFI
                     VCAKSPSCGMERVRLYDEKGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLREN
                     FIARIFALHELNALRAQGLSRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDD
                     LDAFFVRYREKLMAILRHPASRKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAG
                     RLPILAPLTLLKHYLAEHPDDYLRSQNYFEPYPDTLGLRLAIT"
     gene            complement(29398..30126)
                     /locus_tag="MOX77_000383"
     CDS             complement(29398..30126)
                     /locus_tag="MOX77_000383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HCA3356045.1"
                     /translation="MSYSIGEFARLCGINAATLRAWQRRYGLLKPQRTDGGHRLYSDD
                     DIRQALSILDWVRKGVPISQVKPLLSRPVIRLGDNWITIQETMLQHLHEGRIDALRQL
                     IYDCGREYPRAELVTHLLRPLRSKVSAHLPAVMTLREILDGIIIAYTSFCLEGDRKAP
                     GNNAFISGWHLSDHCEIWLEALTRTGQELRLNVLPSPPAVLAPELFAQRKWFLVTTGK
                     LTAGQKKQLAQWRNVVASLEVITL"
     gene            complement(30305..30943)
                     /locus_tag="MOX77_000384"
     CDS             complement(30305..30943)
                     /locus_tag="MOX77_000384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two component system response regulator"
                     /protein_id="HCA3356046.1"
                     /translation="MKEYKILLVDDHEIIINGIMNALLPWPHFKIVEHVKNGLEVYNA
                     CCAYEPDILILDLSLPGINGLDIIPQLHQRWPAMNILVYTAYQQEYMTIKTLAAGANG
                     YVLKSSSQQVLLAALQTVAVNKRYIDPTLNREAILAELNADTTNHQLLTLRERQVLKL
                     IDEGYTNHGISEKLHISIKTVETHRMNMMRKLQVHKVTELLNCARRMRLIEY"
     gene            complement(30974..33736)
                     /locus_tag="MOX77_000385"
     CDS             complement(30974..33736)
                     /locus_tag="MOX77_000385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two component system sensor kinase"
                     /protein_id="HCA3356047.1"
                     /translation="MNLLNLKNTLQTSLVIRLTFLFLLTTIIIWLLSVITAAYISMVQ
                     KRQHIIEDLSALSEMNIVLSNQRFEEAERDAKNLMYQCSLATEIHHNDIFPEVSRHLS
                     VGPSNCTPTLNGEKHRLFLQSSDIDEKSFRRDSFILNHKNEISLLSTDNPSDYSTLQL
                     LTRKSFPLYPTHAGFYWSEPEYINGKGWHASVAVADQQGVFFGVMVKLPDLISKSHLP
                     LDDSIRVWLDQNNHLLPFSYIPQKIRTQLENVTLHDGWQQIPGFLILRTTLHGPGWSL
                     VTLYPYGNLHNRILKTILQQIPFTLTALVLMTSAFCWLLHRSLAKPLWRFVDIINKTA
                     TAPLSTRLPAQRLDELDSIAGAFNQLLDTLQVQYDNLENKVAERTQALNEAKKRAEQA
                     NKRKSIHLTVISHELRTPMNGVLGAIELLQTTPLNIEQQGLADTARNCTLSLLAIINN
                     LLDFSRIESGHFTLHMEETALLPLLDQAMQTIQGPAQSKKLSLRTFVGQHVPLYFHTD
                     SIRLRQILVNLLGNAVKFTETGGIRLTVKRHEEQLIFLVSDSGKGIEIQQQSQIFTAF
                     YQADTNSQGTGIGLTIASSLAKMMGGNLTLKSVPGVGTCVSLVLPLQEYQPPQQIKGT
                     LSAPFCLHRQLACWGIRGEPPHQQNALLNAELLYFPGKLYDLAQQLILCTPNIPIINN
                     LLPPWQLQILLVDDADINRDIIGKMLVSLGQHVTIAASSNEALTLSQQQRFDLVLIDI
                     RMPEIDGIECVQLWHDEPNNLDPDCMFVALSASVATEDIHRCKKNGIHHYITKPVTLA
                     TLARYISIAAEYQLLRNIELQEQDPSRCSALLATDDMVINSKIFQSLDLLLADIENAV
                     SAGKKIDQLIHTLKGCLGQIGQTELVCYVIDIENRVKMGKIIALEELTDLRQKIRMIF
                     KNYTIT"
     gene            34137..34538
                     /gene="spiC"
                     /locus_tag="MOX77_000386"
     CDS             34137..34538
                     /gene="spiC"
                     /locus_tag="MOX77_000386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-2 type III secretion system protein SpiC"
                     /protein_id="HCA3356048.1"
                     /translation="MSEEGFMLAVLKGIPLIQDIRAEGNSRSWIMTIDGHPARGEIFS
                     EAFSISLFLNDLESLPKPCLAYVTLLLAAHPDVHDYAIQLTADGGWLNGYYTTSSSSE
                     LIAIEIEKHLALTCILKNVIRNHHKLYSGGV"
     gene            34540..36033
                     /gene="spiA"
                     /locus_tag="MOX77_000387"
     CDS             34540..36033
                     /gene="spiA"
                     /locus_tag="MOX77_000387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-2 type III secretion system protein SpiA"
                     /protein_id="HCA3356049.1"
                     /translation="MVVNKRLILILLFILNTAKSDELSWKGNDFTLYARQMPLAEVLH
                     LLSENYDTAITISPLITATFSGKIPPGPPVDILNNLAAQYDLLTWFDGSMLYVYPASL
                     LKHQVITFNILSTGRFIHYLRSQNILSSPGCEVKEITGTRAVEVSGVPSCLTRISQLA
                     SVLDNALIKRKDSAVSVSIYTLKYATAMDTQYQYRDQSVVVPGVVSVLREMSKTSVPA
                     SSTTNGSPATQALPMFAADPRQNAVIVRDYAANMAGYRKLITELDQRQQMIEISVKII
                     DVNAGDINQLGIDWGTAVSLGGKKIAFNTGLNDGGASGFSTVISDTSNFMVRLNALEK
                     SSQAYVLSQPSVVTLNNIQAVLDKNITFYTKLQGEKVAKLESITTGSLLRVTPRLLND
                     NGTQKIMLNLNIQDGQQSDTQSETDPLPEVQNSEIASQATLLAGQSLLLGGFKQGKQI
                     HSQNKIPLLGDIPVVGHLFRNDTTQVHSVIRLFLIKASVVNNGISHG"
     gene            36014..37225
                     /gene="ssaD"
                     /locus_tag="MOX77_000388"
     CDS             36014..37225
                     /gene="ssaD"
                     /locus_tag="MOX77_000388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SctD family type III secretion system inner
                     membrane ring subunit SsaD"
                     /protein_id="HCA3356050.1"
                     /translation="MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICI
                     PLAINEKIILREQADSLFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQD
                     CELADYQIPVSRSGYWWLAGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNI
                     HYVRAQWKEDGSLQLSGYCSSSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLI
                     KMGYPHAEVSSEGPGSVLIHDDIQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDI
                     ISAIIENGLVGLVNVTPMRRSFVISGVLDESHQRILQETLAALKKKDPALSLIYQDIA
                     PSHDESKYLPAPVAGFVQSRHGNYLLLTNKERLRVGALLPNGGEIVHLSADVVTIKHN
                     DTLINYPLDFK"
     gene            37233..37475
                     /gene="ssaE"
                     /locus_tag="MOX77_000389"
     CDS             37233..37475
                     /gene="ssaE"
                     /locus_tag="MOX77_000389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YscE family type III secretion system
                     co-chaperone SsaE"
                     /protein_id="HCA3356051.1"
                     /translation="MTTLTRLEDLLLHSREEAKGIILQLRAARKQLEENNGRLQDPQQ
                     YQQNTLLLEAIEQAENIINIIYYRYHNSALVVSEQE"
     gene            37678..38004
                     /gene="sseA"
                     /locus_tag="MOX77_000390"
     CDS             37678..38004
                     /gene="sseA"
                     /locus_tag="MOX77_000390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-2 type III secretion system chaperone SseA"
                     /protein_id="HCA3356052.1"
                     /translation="MMIKKKAAFSEYRDLEQSYMQLNHCLKKFHQIRAKVSQQLAERA
                     ESPKKSRETESILHNLFPQGVAGVNQEAEKDLKKIVSLFKQLEVRLKQLNAQAPVEIP
                     SGKTKR"
     gene            38011..38601
                     /gene="sseB"
                     /locus_tag="MOX77_000391"
     CDS             38011..38601
                     /gene="sseB"
                     /locus_tag="MOX77_000391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-2 type III secretion system translocon
                     protein SseB"
                     /protein_id="HCA3356053.1"
                     /translation="MSSGNILWGSQNPIVFKNSFGVSNADTGSQDDLSQQNPFAEGYG
                     VLLILLMVIQAIANNKFIEVQKNAERARNTQEKSNEMDEVIAKAAKGDAKTKEEVPED
                     VIKYMRDNGILIDGMTIDDYMAKYGDHGKLDKGGLQAIKAALDNDANRNTDLMSQGQI
                     TIQKMSQELNAVLTQLTGLISKWGEISSMIAQKTYS"
     gene            38598..39071
                     /gene="sscA"
                     /locus_tag="MOX77_000392"
     CDS             38598..39071
                     /gene="sscA"
                     /locus_tag="MOX77_000392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SycD/LcrH family type III secretion system
                     chaperone SscA"
                     /protein_id="HCA3356054.1"
                     /translation="MKKDPTLQQAHDTMRFFRRGGSLRMLLDDDVTQPLNTVYRYAMQ
                     LMEVKEFAGAARLFQLLTIYDAWSFDYWFRLGECCQAQKHWGEAIYAYGRAAQIKIDA
                     PQAPWAAAECYLACDNVCYAIKALKAVVRICGEVSEHQILRLRAEKMLQQLSDRS"
     gene            39074..40528
                     /gene="sseC"
                     /locus_tag="MOX77_000393"
     CDS             39074..40528
                     /gene="sseC"
                     /locus_tag="MOX77_000393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-2 type III secretion system translocon
                     protein SseC"
                     /protein_id="HCA3356055.1"
                     /translation="MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTF
                     GDGNAACLLSGKISLQEASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLIL
                     NVFGNNAQSLCQQLERATEVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDW
                     ITGIFETVIGALKVVEGFLSGNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTC
                     QAIIDVTSKIQFGCEAVALALDVFQIGRAFMATRGLSGAAAKVLDSGFGEEMVERMVG
                     AGEAEIEALAEKFGEEVSESFSKQFEPLEREMVSPGEMEEESAEFSRNVEKNMTKNAG
                     KSFTKEGVKAMAKEAVKEALEKYAQEGEKFLLKNFRNKVLFNMFKKILYALLRDCSFK
                     GLQAIRCATEGANQMNTGMVNTEKAKLEKKIEQLITQQRFLDFIMQQTDDQKKIEQKR
                     LEGLYKGSGAALRGVLDTIDHYSSVQARIAGWRA"
     gene            40544..41131
                     /gene="sseD"
                     /locus_tag="MOX77_000394"
     CDS             40544..41131
                     /gene="sseD"
                     /locus_tag="MOX77_000394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-2 type III secretion system translocon
                     protein SseD"
                     /protein_id="HCA3356056.1"
                     /translation="MEASNVALVLPAPSLLTPSSTPSPSGEGMGTESMLLLFDDIWMK
                     LMELAKKLRDIMRSYNVEKQRLSWELQVNVLQTQMKTIDEAFRASMITAGGAMLSGVL
                     TIGLGAVGGETGLIAGQAVGHTAGGVMGLGSGVAQRQSDQDKAIADLQQNGAQSYNKS
                     LTDIMEKATEIMQQIIGVGSSLVTVLAEILRALTR"
     gene            41134..41550
                     /gene="sseE"
                     /locus_tag="MOX77_000395"
     CDS             41134..41550
                     /gene="sseE"
                     /locus_tag="MOX77_000395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LcrR family type III secretion system chaperone
                     SseE"
                     /protein_id="HCA3356057.1"
                     /translation="MVQEIEQWLRRHQVFTEPAYLGETAILLGQQFILSPYLVIYRIE
                     AKEMIICEFRRLTPGQPRPQQLFHLLGLLRGIFVHHPQLTCLKMLIITDVLDEKKAML
                     RRKLLRILTVMGATFTQLDGDNWTILSAEHLIQRRF"
     gene            41602..42036
                     /gene="sscB"
                     /locus_tag="MOX77_000396"
     CDS             41602..42036
                     /gene="sscB"
                     /locus_tag="MOX77_000396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SycD/LcrH family type III secretion system
                     chaperone SscB"
                     /protein_id="HCA3356058.1"
                     /translation="MMMKEDQKNKIPEDILKQLLSVDPETVYASGYASWQEGDYSRAV
                     IDFSWLVMAQPWSWRAHIALAGTWMMLKEYTTAINFYGHALMLDASHPEPVYQTGVCL
                     KMMGEPGLAREAFQTAIKMSYADASWSEIRQNAQKMVDTLIA"
     gene            42052..42834
                     /gene="sseF"
                     /locus_tag="MOX77_000397"
     CDS             42052..42834
                     /gene="sseF"
                     /locus_tag="MOX77_000397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion systems effector SseF"
                     /protein_id="HCA3356059.1"
                     /translation="MKIHIPSAASNIVDGNSPPSGIQAKEASFPPPEIPAPGTPTVPV
                     VLTPEQIRQQRDYAIHFMQYTIRALGATVVFGLSVAAAVISGGAGLPIAILAGAALVI
                     AIGDACCAYHNYQLICQQKAPLQTASDSVALVVSALALKCGASLNCANTLANCLSLLI
                     RSGIAISMLVLPLQFPLPAAENIAASLDMGSVITSVSLTAIGAVLDYCLARPSGDDQE
                     NSVDELHADPSVLLAEQMALLCQSATTPALMDSSGHTSRGEP"
     gene            42831..43520
                     /gene="sseG"
                     /locus_tag="MOX77_000398"
     CDS             42831..43520
                     /gene="sseG"
                     /locus_tag="MOX77_000398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460370.1"
                     /note="SseG, from Salmonella pathogenicity island 2, is a
                     type III secretion system (T3SS) effector protein; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pathogenicity island 2 effector protein SseG"
                     /protein_id="HCA3356060.1"
                     /translation="MKPVSPNAQVGGQRPVNAPEESPPCPSLPHPETNMESGRIGPQQ
                     GKERLLAGLAKRVIECFPKEIFSWQTVILGGQILCCSAGIALTVLSGGGAPLVALAGI
                     GLAIAIADVACLIYHHKHHLPMAHDSIGNAVFYIANCFANQRKSMAIAKAVSLGGRLA
                     LTATVVTHSYWSGSLGLQPHLLEHLNDLTYGLMSFTRFGMDGMAMTGMQVSSPLYRLL
                     AQVTPEQRAPE"
     gene            43614..43829
                     /gene="ssaG"
                     /locus_tag="MOX77_000399"
     CDS             43614..43829
                     /gene="ssaG"
                     /locus_tag="MOX77_000399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system needle filament
                     protein SsaG"
                     /protein_id="HCA3356061.1"
                     /translation="MDIAQLVDMLSHMAHQAGQAINDKMNGNDLLNPESMIKAQFALQ
                     QYSTFINYESSLIKMIKDMLSGIIAKI"
     gene            43807..44097
                     /locus_tag="MOX77_000400"
     CDS             43807..44097
                     /locus_tag="MOX77_000400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001531123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EscG/YscG/SsaH family type III secretion system
                     needle protein co-chaperone"
                     /protein_id="HCA3356062.1"
                     /translation="MESLLKSEVISDDVRRLLLEIMFAGVNHSLISQVHAMLPALTVI
                     VPDKKLQLVCLALLLAGLNEPLKAAKILSDIDLPEAMALRMLFPAPNEGFEN"
     gene            44109..44357
                     /gene="ssaI"
                     /locus_tag="MOX77_000401"
     CDS             44109..44357
                     /gene="ssaI"
                     /locus_tag="MOX77_000401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010989174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SctI family type III secretion system inner rod
                     subunit SsaI"
                     /protein_id="HCA3356063.1"
                     /translation="MSIVPVSTQSYVKSFAEPSQEQINFFKQLLKDEASTSNASALLP
                     QVMLTRQMDYMQLTVGVDYLARISGAASQALNKLDSMT"
     gene            44354..45103
                     /gene="ssaJ"
                     /locus_tag="MOX77_000402"
     CDS             44354..45103
                     /gene="ssaJ"
                     /locus_tag="MOX77_000402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-2 type III secretion system apparatus
                     lipoprotein SsaJ"
                     /protein_id="HCA3356064.1"
                     /translation="MKVHRIIFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHI
                     DAEKKQEEDGVTLRVEQSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQ
                     KINFLKEQRIEGMLSQMEGVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAF
                     RVKIKDLIEMSIPGLQYSKISILMQPAEFRMVPDVPARQTFWIMDVINANKGKVVKWL
                     MKYPYQLMLSLTGLLLGVGILIGYFCLRRRF"
     gene            45121..45669
                     /locus_tag="MOX77_000403"
     CDS             45121..45669
                     /locus_tag="MOX77_000403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytoplasmic protein"
                     /protein_id="HCA3356065.1"
                     /translation="MLQLYRYFWQPARYAVPEWLDKLGFHLSNCWRYGDRPKLDRLLD
                     RALNRLRGSSVIPACLNDRQKRQIRLAPRISAFAFGLGLFKLRCSDYFMLPEYRQLLL
                     QWFSEDEIWQLYGWLGQRDGKLLPPQVMQQTALQIGTAILNREAHDDAVLHALLVLLP
                     PPQRILWPKTSLTEIIFMEHLL"
     gene            45666..46340
                     /gene="ssaK"
                     /locus_tag="MOX77_000404"
     CDS             45666..46340
                     /gene="ssaK"
                     /locus_tag="MOX77_000404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-2 type III secretion system apparatus
                     protein SsaK"
                     /protein_id="HCA3356066.1"
                     /translation="MSFTSLPLTEINHKLPARNIIESQWITLQLTLFAQEQQAKRVSH
                     AIVSSAYRKAEKIIRDAYRYQREQKVEQQQEIAWLRKNTLEKMEVEWLEQHVKHLQED
                     ENQFRSLVDHAAHHIKNSIEQVLLAWFDQQSVDSVMCHRLARQATAMAEEGALYLRIH
                     PEKEALMRETFGKRFTLIIEPGFSPDQAELSSTRYAVEFSLSRHFNALLKWLRNGEDK
                     RGSDEY"
     gene            46306..47322
                     /gene="ssaL"
                     /locus_tag="MOX77_000405"
     CDS             46306..47322
                     /gene="ssaL"
                     /locus_tag="MOX77_000405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-2 type III secretion system apparatus
                     protein SsaL"
                     /protein_id="HCA3356067.1"
                     /translation="MVKIKEVAMNIKINEIKMTPPTAFTPGLVIEEQEVISPSMLALH
                     ELQETAGAALYETMEEIGMALSGKLRESNKFTDAEKLERRQQALLRLIKQIQEDNGAA
                     LRPLTEENSDPDLQNAYQIIALAMALTAGGLSKKKKRDLQSQLDTLTAEEGWELAVFS
                     LLELGEVDTATLSSLKRFMQQAIDNDEMPLSQWFRRVADWPDRGERVRILLRAIAFEL
                     SICIEPSEQSRLAAALVRLRRLLLFLGLEKECQREEWICQLPPNTLLPLLLDIICERW
                     LFSDWLLDRLTAIVSSSKMFNRLLQQLDAQFMLIPDNCFNDEDQREQILETLREVKIN
                     QVLF"
     gene            47380..47748
                     /gene="ssaM"
                     /locus_tag="MOX77_000406"
     CDS             47380..47748
                     /gene="ssaM"
                     /locus_tag="MOX77_000406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-2 type III secretion system apparatus
                     protein SsaM"
                     /protein_id="HCA3356068.1"
                     /translation="MDWDLITERNIQLFIQLAGLAERPLATNMFWRQGQYETCLNYHN
                     GRIHLCQILKQTFLDEELLFKALANWKPAAFQGIPQRLFLLRDGLAMSCSPPLSSSAE
                     LWLRLHHRQIKFLESQCVHG"
     gene            47733..49778
                     /gene="ssaV"
                     /locus_tag="MOX77_000407"
     CDS             47733..49778
                     /gene="ssaV"
                     /locus_tag="MOX77_000407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-2 type III secretion system apparatus
                     protein SsaV"
                     /protein_id="HCA3356069.1"
                     /translation="MRSWLGEGIRAQQWLSVCAGRQDMVLATVLLIAIVMMLLPLPTW
                     MVDILITINLMFSVILLLIVIYLSDPLDLSVFPSLLLITTLYRLSLTISTSRLVLLQH
                     NAGNIVDAFGKFVVGGNLTVGLVVFTIITIVQFIVITKGIERVAEVSARFSLDGMPGK
                     QMSIDGDLRAGVIDADHARTLRQHVQQESRFLGAMDGAMKFVKGDTIAGIIVVLVNII
                     GGIIIAIVQYDMSMSEAVHTYSVLSIGDGLCGQIPSLLISLSAGIIVTRVPGEKRQNL
                     ATELSSQIARQPQSLILTAVVLMLLALIPGFPFITLAFFSALLALPIILIRRKKSVVS
                     ANGIEAPEKDSMVPGACPLILRLTPTLHSADLIRDIDAMRWFLFEDTGVPLPEVNIEV
                     LPEPTEKLTVLLYQEPVFSLSIPAQADYLLIGADASVVGDSQTLPNGMGQICWLSKDM
                     AHKAQGFGLDVFAGSQRISALLKCVLLRHMGEFIGVQETRYLMNAMEKNYSELVKELQ
                     RQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPREKDVLMLTEYVRIALRRHIL
                     RRLNPEGKPLPILRIGEGIENLVRESIRQTAMGTYTALSSRHKTQILQLIEQALKQSA
                     KLFIVTSVDTRRFLRKITEATLFDVPILSWQELGEESLIQVVESIDLSEEELADNEE"
     gene            49768..51069
                     /gene="ssaN"
                     /locus_tag="MOX77_000408"
     CDS             49768..51069
                     /gene="ssaN"
                     /locus_tag="MOX77_000408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SctN family type III secretion system ATPase
                     SsaN"
                     /protein_id="HCA3356070.1"
                     /translation="MKNELMQRLRLKYPPPDGYCRWGRIQDVSATLLNAWLPGVFMGE
                     LCCIKPGEELAEVVGINGSKALLSPFTSTIGLHCGQQVMALRRRHQVPVGEALLGRVI
                     DGFGRPLDGCELPDVCWKDYDAMPPPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGI
                     FSAPGVGKSTLLAMLCNAPDADCNVLVLIGERGREVREFIDFTLSEETRKRCVIVVAT
                     SDRPALERVRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGE
                     YPPGVFSALPRLLERTGMGEKGSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRR
                     LAERGHYPAIDVLATLSRVFPVVTSHEHRQLAAILRRRLALYQEVELLIRIGEYQRGV
                     DTDTDKAIDTYPDICTFLRQSKDEVCGPELLIEKLHQILTE"
     gene            51072..51449
                     /gene="ssaO"
                     /locus_tag="MOX77_000409"
     CDS             51072..51449
                     /gene="ssaO"
                     /locus_tag="MOX77_000409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-2 type III secretion system apparatus
                     protein SsaO"
                     /protein_id="HCA3356071.1"
                     /translation="METLLEIIARREKQLRSKLTVLDQQQQAIITEQQICQTRALAVT
                     TRLKELMGWQGTLSCHLLLDKKQQMAGLFTQAQSFLTQRQQLENQYQQLVSRRSELQK
                     NFNALMKKKEKITMVLSDAYYQS"
     gene            51430..51804
                     /gene="ssaP"
                     /locus_tag="MOX77_000410"
     CDS             51430..51804
                     /gene="ssaP"
                     /locus_tag="MOX77_000410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-2 type III secretion system apparatus
                     protein SsaP"
                     /protein_id="HCA3356072.1"
                     /translation="MRITKVEGSLGLPCQSYQDDNEAEVERMDFEQLMHQALPIGENN
                     PPAALNKNVVFTQRYRVSGGYLDGVECEVCESGGLIQLRINVPHHEIYRSMKALKQWL
                     ESQLLHMGYIISLEIFYVKNSE"
     gene            51785..52753
                     /gene="ssaQ"
                     /locus_tag="MOX77_000411"
     CDS             51785..52753
                     /gene="ssaQ"
                     /locus_tag="MOX77_000411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-2 type III secretion system cytoplasmic ring
                     protein SsaQ"
                     /protein_id="HCA3356073.1"
                     /translation="MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINY
                     HNELGRVWIAEQCWQRWCEGLIGTANRSAIEPELLYGIAEWGLAPLLQASDATLCQNE
                     PPTSCSNLPHQLALHIKWTVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVV
                     VPVYLGWCQLTLIELESIEIGMGVRIHCFGDIRLGFFAIQLPGGIYARVLLTEDNTMK
                     FDELVQDIETLLASGSPMLKSDGTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDV
                     LPVGGCFAPEVTIRVNDRIIGQGELIACGNEFMVRITRWYLCKNTA"
     gene            52821..53468
                     /gene="ssaR"
                     /locus_tag="MOX77_000412"
     CDS             52821..53468
                     /gene="ssaR"
                     /locus_tag="MOX77_000412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-2 type III secretion system export apparatus
                     protein SsaR"
                     /protein_id="HCA3356074.1"
                     /translation="MSLPDSPLQLIGILFLLSILPLIIVMGTSFLKLAVVFSILRNAL
                     GIQQVPPNIALYGFALVLSLFIMGPTLLAVKERWHPVQVAGAPFWTSEWDSKALAPYR
                     QFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILIPAFTVSQLTQAFRIGLLI
                     YLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGGWDLTLAQLVQSFS"
     gene            53465..53731
                     /gene="ssas"
                     /locus_tag="MOX77_000413"
     CDS             53465..53731
                     /gene="ssas"
                     /locus_tag="MOX77_000413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-2 type III secretion system apparatus
                     protein SsaS"
                     /protein_id="HCA3356075.1"
                     /translation="MNDSELTQFITQLLWIVLFTSMPVVLVASVVGVIVSLVQALTQI
                     QDQTLQFMIKLLAIAITLMVSYPWLSGILLNYTRQIMLRIGEHG"
     gene            53732..54511
                     /gene="ssaT"
                     /locus_tag="MOX77_000414"
     CDS             53732..54511
                     /gene="ssaT"
                     /locus_tag="MOX77_000414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-2 type III secretion system apparatus
                     protein SsaT"
                     /protein_id="HCA3356076.1"
                     /translation="MTQQVNEWLIALAVAFIRPLSLSLLLPLLKSGSLGAALLRNGVL
                     MSLTFPILPIIYQQKIMMHIGKDYSWLGLVTGEVIIGFLIGFCAAVPFWAVDMAGFLL
                     DTLRGATMGTIFNSTMEAETSLFGLLFSQFLCVIFFISGGMEFILNILYESYQYLPPG
                     RTLLFDRQFLKYIQAEWRTLYQLCISFSLPAIICMVLADLALGLLNRSAQQLNVFFFS
                     MPLKSILVLLTLLISFPYALHHYLVESDKFYIYLKDWFPSV"
     gene            54508..55566
                     /gene="ssaU"
                     /locus_tag="MOX77_000415"
     CDS             54508..55566
                     /gene="ssaU"
                     /locus_tag="MOX77_000415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-2 type III secretion system apparatus
                     protein SsaU"
                     /protein_id="HCA3356077.1"
                     /translation="MSEKTEQPTEKKLRDGRKEGQVVKSIEITSLFQLIALYLYFHFF
                     TEKMILILIESITFTLQLVNKPFSYALTQLSHALIESLTSALLFLGAGVIVATVGSVF
                     LQVGVVIASKAIGFKSEHINPVSNFKQIFSLHSVVELCKSSLKVIMLSLIFAFFFYYY
                     ASTFRALPYCGLACGVLVVSSLIKWLWVGVMAFYIVVGILDYSFQYYKIRKDLKMSKD
                     DVKQEHKDLEGDPQMKTRRREMQSEIQSGSLAQSVKQSVAVVRNPTHIAVCLGYHPTD
                     MPIPRVLEKGSDAQANYIVNIAERNCIPVVENVELARSLFFEVERGDKIPETLFEPVA
                     ALLRMVMKIDYAHSTETP"
     gene            complement(55724..55800)
                     /locus_tag="MOX77_000416"
     tRNA            complement(55724..55800)
                     /locus_tag="MOX77_000416"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(55764..55766),aa:Val,seq:gac)
     gene            complement(55811..55887)
                     /locus_tag="MOX77_000417"
     tRNA            complement(55811..55887)
                     /locus_tag="MOX77_000417"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(55851..55853),aa:Val,seq:gac)
     gene            complement(56039..57412)
                     /gene="mdtK"
                     /locus_tag="MOX77_000418"
     CDS             complement(56039..57412)
                     /gene="mdtK"
                     /locus_tag="MOX77_000418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460388.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MATE transporter MdtK"
                     /protein_id="HCA3356078.1"
                     /translation="MQKYTSEARQLLALAIPVILAQVAQTAMGFVDTVMAGGYSATDM
                     AAVAIGTSIWLPAILFGHGLLLALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLV
                     MIVLWNAGYIIRSMHNIDPALADKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPG
                     MVMGFLGLLVNIPVNYIFIYGHFGMPELGGIGCGVATAAVYWVMFIAMLSYIKHARSM
                     RDIRNEKGFGKPDSVVMKRLIQLGLPIALALFFEVTLFAVVALLVSPLGIVDVAGHQI
                     ALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLGVGICMAVVTAIFTV
                     TLRKHIALLYNDNPEVVALAAQLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFFITF
                     TAYWVLGLPSGYILALTDLVVDRMGPAGFWMGFIIGLTSAAVLMMLRMRYLQRQPSAI
                     ILQRAAR"
     gene            57629..58270
                     /locus_tag="MOX77_000419"
     CDS             57629..58270
                     /locus_tag="MOX77_000419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HCA3356079.1"
                     /translation="MFTGIVQGTAKLVSIDEKPNFRTHVVTLPDYMLEGLETGASVAH
                     NGCCLTVTEINGNQISFDLMKETLRITNLGALRVGDEVNVERAAKFSDEIGGHLMSGH
                     IITTAEIAKILTSENNHQVWFKVQDASLMKYILYKGFIGVDGISLTVGEVTPTRFCVH
                     LIPETLERTTLGRKKLGERVNIEIDPQTQAVVDTVERVLATRENVVRNQADIG"
     gene            complement(58312..59460)
                     /gene="cfa"
                     /locus_tag="MOX77_000420"
     CDS             complement(58312..59460)
                     /gene="cfa"
                     /locus_tag="MOX77_000420"
                     /EC_number="2.1.1.79"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclopropane fatty acyl phospholipid synthase"
                     /protein_id="HCA3356080.1"
                     /translation="MSSSCIEEVSVPDDNWYRIANELLSRADITINGSAPSDIRVKNP
                     DFFKRVLQEGSLGLGESYMDGWWECERLDIFFSKVLRAGLENQLPHHVKDTLRILGAR
                     LINLQSKKRAWIVGKEHYDLGNDLFSRMLDPYMQYSCAYWKDADTLEAAQQAKLKLIC
                     EKLQLQPGMRVLDIGCGWGGLSQYMATHYGVSVVGVTISAEQQKMAQTRCEGLDVSIL
                     LEDYRDLNDQFDRIVSVGMFEHVGPKNYNTYFEVVDRNLKPDGLFLLHTIGSKKTDHN
                     VDPWINKYIFPNGCLPSVRQIAEASESHFVMEDWHNFGADYDTTLMAWHERFINAWPE
                     IAGNYNERFKRMFSYYLNACAGAFRARDIQLWQVVFTRGVENGLRVPR"
     gene            complement(59749..60954)
                     /locus_tag="MOX77_000421"
     CDS             complement(59749..60954)
                     /locus_tag="MOX77_000421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bcr/CflA family multidrug efflux MFS
                     transporter"
                     /protein_id="HCA3356081.1"
                     /translation="MQPGKGFLVWLAGLSVLGFLATDMYLPAFAAIQADLQTPAAAVS
                     ASLSLFLAGFAVAQLLWGPLSDRYGRKPILLLGLSIFALGSLGMLWVESAAALLTLRF
                     VQAVGVCAATVIWQALVTDYYPSQKINRIFATIMPLVGLSPALAPLLGSWILTHFSWQ
                     VIFATLFVITLLLMLPALRLKPSVKARTEGQDKLTFATLLRSKTYRGNVLIYAACSAS
                     FFAWLTGSPFILSAMGYSPAVIGLSYVPQTIAFLIGGYGCRAALQKWQGYQLLPWLLG
                     LYALSVIATWGAGLLNNASLVEILIPFCVMAIANGAIYPIVVAQALRPFPQATGRAAA
                     LQNTLQLGLCFLASLVVSWLISTPLLTTTSVMLSTVVLAALGYKMQSHADCAETGFPH
                     ANVAHDKSH"
     gene            61067..61999
                     /locus_tag="MOX77_000422"
     CDS             61067..61999
                     /locus_tag="MOX77_000422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCA3356082.1"
                     /translation="MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWL
                     AVPLFVRRHRDVELTPAGVWFLKEGRSVIKKMQITRQQCQQIANGWRGQLAIAVDNIV
                     RPERTRQMIVDFYRHFDDVELLVFQEVFNGVWDALSDGRVELAIGATQAIPVGGRYAF
                     RDMGTLSWSCVVASDHPLASMPGPLSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKR
                     VVVPDWESSATCLSAGLCVGMVPTHFARQWIDSGKWVALTLENPFPDAACCVTWQQNE
                     ASPALAWLLDYLGDSETLNREWLREPEEAPDSGD"
     gene            complement(61996..63021)
                     /gene="purR"
                     /locus_tag="MOX77_000423"
     CDS             complement(61996..63021)
                     /gene="purR"
                     /locus_tag="MOX77_000423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005127190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional repressor PurR"
                     /protein_id="HCA3356083.1"
                     /translation="MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELH
                     YSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLE
                     KQRAYLSMMAQKRVDGLLVMCSEYPEPLLSMLEEYRHIPMVVMDWGEAKADFTDTVID
                     NAFAGGYMAGRYLVERGHRDIGVIPGPLERNTGAGRLAGFMKAMEEALINVPDNWIVQ
                     GDFEPESGYHAMQQILSQSHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSVIGYDN
                     VRNARFFTPALTTIHQPKDSLGETAFNMLLDRIVNKREESQSIEVHPRLVERRSVADG
                     PFRDYRR"
     gene            63317..63406
                     /locus_tag="MOX77_000424"
     CDS             63317..63406
                     /locus_tag="MOX77_000424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YnhF family membrane protein"
                     /protein_id="HCA3356084.1"
                     /translation="MSTDLKFSLITTLIVLGVIVAGGLTAALH"
     gene            complement(63489..64070)
                     /gene="sodB"
                     /locus_tag="MOX77_000425"
     CDS             complement(63489..64070)
                     /gene="sodB"
                     /locus_tag="MOX77_000425"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Fe]"
                     /protein_id="HCA3356085.1"
                     /translation="MSFELPALPYAKDALAPHISAETLEYHYGKHHQTYVTNLNNLIK
                     GTAFEGKSLEEIVRTSEGGIFNNAAQVWNHTFYWNCLAPNAGGEPTGKLADAIAASFG
                     SFAEFKAQFTDAAIKNFGSGWTWLVKSADGKLAIVSTSNAGTPLTTDATPLLTVDVWE
                     HAYYIDYRNARPNYLEHFWALVNWEFVAKNLAA"
     gene            complement(64197..65018)
                     /locus_tag="MOX77_000426"
     CDS             complement(64197..65018)
                     /locus_tag="MOX77_000426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HCA3356086.1"
                     /translation="MARINKISITLCALLFTTLPFTPMAHASRQAKATPAVSHVTKTA
                     DKKKSTTKKISKTSKKNVKKTSKTSRSSSASTPKRTTAATKSRHTTHRRNRTAPTSIA
                     ALDVTEKCTTRKGRKPHCVKGKGTLPVSIADAHRAKVQKATKTAMSKLMNQIGKPYHW
                     GGASPRTGFDCSGLVYYAYKDLVKIRIPRTANEMYHLRDAAPIERSELKNGDLVFFRT
                     QGRGTADHVGVYVGNGKFIQSPRSGQEIKITSLNEEYWQRHYVGARRVMTPKTIR"
     gene            65353..65700
                     /gene="grxD"
                     /locus_tag="MOX77_000427"
     CDS             65353..65700
                     /gene="grxD"
                     /locus_tag="MOX77_000427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monothiol glutaredoxin 4"
                     /protein_id="HCA3356087.1"
                     /translation="MSTTIEKIQRQIAENPILLYMKGSPKLPSCGFSAQAVQALSACG
                     ERFAYVDILQNPDIRAELPKYANWPTFPQLWVDGELVGGCDIVIEMYQRGELQQLIKE
                     TAAKYKTQEPDAE"
     gene            complement(65778..66425)
                     /gene="rnt"
                     /locus_tag="MOX77_000428"
     CDS             complement(65778..66425)
                     /gene="rnt"
                     /locus_tag="MOX77_000428"
                     /EC_number="3.1.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease T"
                     /protein_id="HCA3356088.1"
                     /translation="MSDNAQLSGLCDRFRGFYPVVIDVETAGFNAKTDALLEIAAITL
                     KMDEQGWLMPDMTLHFHVEPFAGANLQPEALAFNGIDPSNPLRGAVSEYEALHAIFKM
                     VRKGIKDSGCSRAIMVAHNATFDHSFMMAAAERASLKRNPFHPFVTFDTAALSGLALG
                     QTVLSKACLAAGMEFDGEKAHSALYDTERTAVLFCEIVNRWKRLGGWPLPLPTDK"
     gene            complement(66526..66933)
                     /gene="gloA"
                     /locus_tag="MOX77_000429"
     CDS             complement(66526..66933)
                     /gene="gloA"
                     /locus_tag="MOX77_000429"
                     /EC_number="4.4.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008500591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoylglutathione lyase"
                     /protein_id="HCA3356089.1"
                     /translation="MRLLHTMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFV
                     GYGPETEEAVIELTYNWGVESYDMGNAYGHIALSVDNAAEACERIRQNGGNVTREAGP
                     VKGGSTIIAFVEDPDGYKIELIEAKDAGRGLGN"
     gene            complement(67002..68099)
                     /locus_tag="MOX77_000430"
     CDS             complement(67002..68099)
                     /locus_tag="MOX77_000430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkene reductase"
                     /protein_id="HCA3356090.1"
                     /translation="MSSAKLFTPLKVGAITATNRVFMAPLTRLRSIEPGDIPTPLMAE
                     YYRQRASAGLIISEATQISAQAKGYAGAPGLHSDEQIAAWKKITQGVHAQGGHMAVQL
                     WHTGRISHASLQPGGQAPVAPSAINAGTRTSLRDENGQAIRVETSTPRALDTHEIPGI
                     VNDFRQAIANAREAGFDLVELHSAHGYLLHQFLSPSSNHRTDRYGGSVENRARLVLEV
                     VDAGIKEWGADRIGIRLSPVGTFQNVDNGPNEEADALYLIEALGKRGIAYLHMSEPDW
                     AGGEPYSDAFREKVRARFHGPIIGAGAYTPEKAEDLIEKGLIDAVAFGRDYIANPDLV
                     ARLQRKAELNPQRPESFYGGGAEGYTDYPTL"
     gene            complement(68158..68757)
                     /locus_tag="MOX77_000431"
     CDS             complement(68158..68757)
                     /locus_tag="MOX77_000431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HCA3356091.1"
                     /translation="MNKQTEHDTREHLLATGEQLCMQRGFTGMGLSELLKTAQVPKGS
                     FYHYFRSKEAFGVAMLERHYACYHQRLTAHFTSGPGNHRDRLLAWYQETLKQFCQQGA
                     ISGCLTVKLSAEVCDLSEDMRSTMDKGAQEIMALLARALEDGRNSHCLHFTGQPLPQA
                     QVLYALWLGANLQAKISRSAAPLENALAHVKTIIATPEQ"
     gene            68860..69099
                     /locus_tag="MOX77_000432"
     CDS             68860..69099
                     /locus_tag="MOX77_000432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1289 domain-containing protein"
                     /protein_id="HCA3356092.1"
                     /translation="MAEQLEFFPVASPCRGICQSDERGFCRGCMRSRDERFNWQKMSD
                     AEKQNVLRLCRQRFLRKIRANKPLPSEDPQQPSLF"
     gene            69150..70046
                     /locus_tag="MOX77_000433"
     CDS             69150..70046
                     /locus_tag="MOX77_000433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase family oxidoreductase"
                     /protein_id="HCA3356093.1"
                     /translation="MVQRVTIAPQGPEFSRFVMGYWRLMDWNMSARQLVSFIEEHLDL
                     GVTTVDHADIYGGYQCEAAFGEALTLAPHLREKLQIVTKCGIATTARAENRLGHYITD
                     RRHIILSAEQSLKDLATDYLDMLLIHRPDPLMDADDVAEAFQHLHQSGKVRHFGVSNF
                     TPAQFTLLQSRLPFTLATNQVEISPVHQPLLLDGTLDQLQQLRIRPMAWSCLGGGRLF
                     NDEAYQPLRQELSVIAQELNASSIEQVVYAWILRLPSQPLPIIGSGKIERVRAALEAE
                     TLSLSRQQWFRIRKAALGYDVP"
     gene            70126..70647
                     /gene="sodC"
                     /locus_tag="MOX77_000434"
     CDS             70126..70647
                     /gene="sodC"
                     /locus_tag="MOX77_000434"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Cu-Zn] SodC2"
                     /protein_id="HCA3356094.1"
                     /translation="MKRLSLAMVTLLACAGAQAASEKVEMNLVTAQGVGQSIGTVVID
                     ETEGGLKFTPHLKALPPGEHGFHIHAKGSCQPAIKDGKAVAAEAAGGHLDPQNTGKHE
                     GPEGQGHLGDLPVLVVNNDGIATEPVTAPRLKSLDEVKDKALMIHVGGDNMSDQPKPL
                     GGGGTRYACGVIK"
     gene            complement(70623..72662)
                     /locus_tag="MOX77_000435"
     CDS             complement(70623..72662)
                     /locus_tag="MOX77_000435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HCA3356095.1"
                     /translation="MKLSLPALRNTPWFKATSGQWRYALRNTIAMCLALTFAYYLNLD
                     EPYWAMTSAAVVSFPTVGGVISKSLGRIAGSLLGATAALIIAGHTLNEPWLFLFSMAA
                     WIGFCTWACAHFTNNAAYAFQLSGYTAAIIAFPMVNIVEITQLWDIAQARVCEVIVGI
                     LCGGMMMMILPSTSDGTALLTALKNMHARLLEHASLLWQPETTDAIRSAHEGVIGQIL
                     TMNLLRIQAFWSHYRFRRQNALLNALLHQQLRLTSVISSLRRMLLNWPTPPENSREVI
                     EQLLAELAKPRADSYTVARIIAPLCPQDEQDYRHLAFWQRLRYFCQLYLRSSRQLYLI
                     ESGAPVDQIHIRRTPGLARHTDNAEAIWSGVRTFCTLTVIGAWSIGVQWESGPGALTL
                     AAISCVLYSIVATPFKSLSLLMRTLVLLSLFSFVVKFGLMVQITDLWQFLLFLFPLFV
                     TMQLLKLQMPKLAGLWGQLIVFMGSFIAVTNPPVYDFADFLNDNTAKIVGVAISWLAF
                     AILRPGSDAVKSRRHIRALRRDFVDQLSRHPSHSESEFESLTYHHVSQLSNSQDALAR
                     RWLLRWGVVLLNCSHVVWQLRAWESRSDPLSRVRDICISLLRDVMSERDVQQRPLAVT
                     LQELQRICDTLAHHHQPAAHELAAIIWRLHCSLSQLEQAPAQGTLSPGYLMTPQA"
     gene            complement(72662..73522)
                     /locus_tag="MOX77_000436"
     CDS             complement(72662..73522)
                     /locus_tag="MOX77_000436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012218841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HCA3356096.1"
                     /translation="MSLKTIKYFSTLIVAVVAVLAAWWLWNYYMQSPWTRDGKIRAEQ
                     VSVTPQVSGSITQLNIKDNQFVNAGDVLFVIDKTPFHIAELNAQAQLAKAQSDLAKAN
                     NEADRRRHLSRNYISAEDLDSANLNVKAMQASVDVALATLKQAQWQLSQTEVKAPVSG
                     WVTNLSTRTGDYASTGKPLFALVDSHSFYVMGYFEETKLRHIREGEPALITLYSGNVK
                     LQGHVGSIGRAIYDQSVESDSGLVPDIKPNVPWVRLAQRVPVRIEFDALPQDITLVSG
                     TTCSVAIGQR"
     gene            complement(73525..73761)
                     /locus_tag="MOX77_000437"
     CDS             complement(73525..73761)
                     /locus_tag="MOX77_000437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1656 domain-containing protein"
                     /protein_id="HCA3356097.1"
                     /translation="MKCILNATGLPLQDLMLGASVYFPPFFKAFALGFVIWLFIHRLL
                     RDRIYSDEIWHPLLMDLSLFTLCVCLGLVLLIVW"
     gene            73956..74396
                     /gene="slyA"
                     /locus_tag="MOX77_000438"
     CDS             73956..74396
                     /gene="slyA"
                     /locus_tag="MOX77_000438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460407.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator SlyA"
                     /protein_id="HCA3356098.1"
                     /translation="MKLESPLGSDLARLVRIWRALIDHRLKPLELTQTHWVTLHNIHQ
                     LPPDQSQIQLAKAIGIEQPSLVRTLDQLEDKGLISRQTCASDRRAKRIKLTEKAEPLI
                     AEMEEVIHKTRGEILAGISSEEIELLIKLVAKLEHNIMELHSHD"
     gene            complement(74444..>74601)
                     /gene="slyB"
                     /locus_tag="MOX77_000439"
     CDS             complement(74444..>74601)
                     /gene="slyB"
                     /locus_tag="MOX77_000439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="outer membrane lipoprotein SlyB"
                     /protein_id="HCA3356099.1"
                     /translation="AMNKTQGVELEIRKDDGNTIMVVQKQGNTRFSAGQRVVLASNGS
                     QVTVSPR"
BASE COUNT        19135 a        17431 c        19425 g        18610 t
ORIGIN      
        1 tagccgcgag acgacaggca aaatggcgta tacccatcgc cacttgttcg ccgcgccagt
       61 aaagcagggc gctaaacaac agcatcaggg cgcagtgcat cataaagcgt ccgatatgcg
      121 ccgcctgacc gacaaaccag atcgtggttg tgccgatata aggccgcact ttcgccataa
      181 tagcgctacc gcccatatcc agcaggctat gccatccggc atacagtttg gcgccaacta
      241 acggaatatt atttaaccat gccagatcgg gtagcgtcat atcgccgccg gtcactgcat
      301 ggatgagcgg gccgctacca tcgacaatgc tgttcaccag caaggcgacg ggaataacga
      361 agagcagcac taacagcagc gtcatgacca gtacggcaag cgagcggcgg ccccacaata
      421 ttttttgtaa tttcagcaaa acgggccagg tcgcgataac aatcgtacct gcccatgcaa
      481 accccaaaat aaaaggctgt actatccaca aacaggccac aatcatgatg gctaaaaaca
      541 gcaccgatag cagcacttgc gcaatatccc tgggctgacg aacatttacc ataaatactt
      601 ttcacctttg tctttgcgcc agaacgttgg cgcgacgtga acatgcaaac cacaccctat
      661 aatgatgagc aatttcagcg gtttttaaca ggccgattct gcatgtaatt ctgttgggcg
      721 cacaggaaaa aaatgtgata caacaaataa cgcaacacgc aaacgattaa gcatcccttc
      781 ctgtgcgtag accgctcgcg ctcgccgggt tgggcgccac cgttcacaac atagaccgca
      841 ggaaaaggtc aatataatga ttccacaaat ttctcaggca cccggcgtcg ttcagctggt
      901 gctcaatttt ttgcaggcgc tggagcagca agggtttacg ggcgatacgg caaccagcta
      961 tgccgaccgt ctgacaatgt cgaccgataa cagtatctac cagcttcttc ccgatgctgt
     1021 tgtgtttccc cgttctacgg cggatgtcgc gcttcttgcc cgtctggcgg cggagccgcg
     1081 ctttacgtcg ctgatattta ccccgcgagg cggcggtact ggcacgaatg gccaggcgct
     1141 aaaccagggc attattgttg atatgtcccg ctatatgaac cgcattattg aaattaatcc
     1201 tgaagaggga tgtgtgcggg tagaggcggg agtgataaaa gatcagctta atcaagcgtt
     1261 aaagccgtat ggctattttt ttgcgccgga actttccacc agtaatcgcg ccacgcttgg
     1321 cggtatgatt aataccgatg cctctggtca gggttcgctg gtctatggaa aaacgtcaga
     1381 tcacgtctta ggcatacggg ccgtattgtt ggggggcgat atccttgaca cgcaatcgat
     1441 gcccgtagat cttgcccgga cgctgggtga aaacacgacg acgccaggcc gcatctatca
     1501 gaccgtctat cagtcctgcc tggaaaaccg tcaacttatc ctcgatagct ttccaaagct
     1561 caatcgcttc ctgacaggct acgatttacg ccacgtcttt aacgatgaca tgacccgctt
     1621 cgatctcacc cgcatcttaa cggggtcgga agggacgctg gcgtttatta ctgaagcccg
     1681 gctggatatt accccgatac ccaaagtccg ccgtctggtg aatgtaaaat acgactcctt
     1741 tgattccgcg ctgcgtaacg ccccttttat ggttgacgcg cgcgccttat ccgtcgagac
     1801 ggtcgattcc aaagtcctta accttgcgcg ggaagatatt gtctggcact ccgttagcga
     1861 attgattacc gatgtgccgg ataaagagat gcttggcctg aatatcgtgg aattcgcggg
     1921 tgatgatgaa gcgcttattg acggacaggt cgaggcgctg tgccaccgac tggatggcct
     1981 gatggcgcgt gcggaagcgg gcgtgatcgg ctggcaactt tgtaccgatt tgacgggtat
     2041 tgagcgtatt tacgcgatgc gtaaaaaagc ggtagggctg ctgggtaatg cgaaaggcgc
     2101 tgccaaaccg attccttttg cggaagatac ctgtgtgccg cctgaacatc tggccgatta
     2161 catcgccgaa tttcgcgctc tgctggatgg tcatggctta agttacggca tgttcggcca
     2221 cgtggatgcc ggggtgctgc atgtgcgccc ggcgctggat atgtgcgatc cgcagcagga
     2281 actgttgatg aaacagatct ccgatgaggt cgtcgcgctg accgccagat acggcgggtt
     2341 gttgtggggc gaacatggaa aaggtttccg tgcggaatac agcccggcct ttttcggcga
     2401 agtcctgtat ggcgagctgc gcaaaataaa agcggctttt gatccgcata atcgacttaa
     2461 cccgggtaaa atctgtccgc cgcaggggat agaggcgccg atgatgaagg tggatgcggt
     2521 aaaacgcggc acctgggatc ggcaaatccc gctggcggtg cggcagacct ggcgcggcgc
     2581 tatggagtgt aatggtaacg gcctgtgctt taatttcgat gcgaaaagcc cgatgtgccc
     2641 gtcgatgaaa attagcctta accggatcca ctcgccgaaa gggcgggcga cgctggtgcg
     2701 ggaatggctc cgtctattgg ccgatcgcgg cgtcgatccg ttgaagctgg aaaaggagct
     2761 gccggaaaaa cgcgccagct tgcgcacgct gattgcccgc acccggaata gttggcacaa
     2821 acgcaaaggc gagtatgact tttcccatga agttaaagag gccatgtccg gctgtctggc
     2881 atgtaaagcc tgtacgaccc agtgtccgat taaaatcgat gttccggagt ttcgttcacg
     2941 tttcttacag ctttaccata cgcgttatct gcgcccggta cgcgatcatc tggtggcgac
     3001 ggtcgagacc tacgcgccgc tgatggcgcg tgcgccaaag acctttaact tttttattaa
     3061 ccaaccggtg gttcgtaatc tggcgaaaaa acatatcggt atggtggatt tacctctgct
     3121 ttctgcccct tcattgcaac agcaactggt gggccatccg tctgccaata tgacgcttga
     3181 gcaactggag cgcatgagcg ccgagcaaaa agcgaaaacg gtactggtag ttcaggatcc
     3241 gtttaccagc tactacgacg ctcgggtcgt agcggacttt atccgcctgg cggaaaaact
     3301 gggcaggagg ccggtattgt taccgttctc gccgaatggt aaggcgcagc atattaaagg
     3361 ttttcttaat cgctttgcga aaacggcgaa aaaaacctct gagttcctta atcggatcgc
     3421 cgcgttgggg atgccaatag tgggcgtcga tccggcgctg gtcctgtgtt atcgcgacga
     3481 atataaactg gcgctgggcg aacagcgcgg cgattttcat gtgttgctgg tgaatgaatg
     3541 gctggcgcag gaaataaatg caagactgtc cgtcgaggta agcggtgaac cgtggtactt
     3601 ttttggtcat tgtacggaag tcacggcttt acccggcgcg cctgcgcagt gggccgccat
     3661 ctttgcccat tttggcgcga agctggaaaa tgtcagcgta ggctgctgcg gtatggcggg
     3721 cacttatgga catgaactca ccaatcataa aaattcgctg ggaatttatg agctatcctg
     3781 gcatcaggcg atgcaacgtc taccgcgaaa ccgctgcctg gcaaccggct attcctgccg
     3841 aagccaggtt aaacgcattg aaggtacggg cgtgcgtcac ccgttgcagg cattactgga
     3901 gattataggt tgatctggaa acgtgaagtg accctcgatg cgcttaatgc gatgggggaa
     3961 gggaatatgg ttggcctgct tgatatccgc tttgagcgta ttggggacga tacgctggaa
     4021 gcgacaatgc ccgtcgatca tcgcaccaaa cagccgttcg gcttgctgca tggcggagcg
     4081 tctgtggtgc tggcggaaag tatcggctcg gtcgcaggct atctgtgtac gcagggggag
     4141 caaaaggtgg tggggctgga ggtgaatgcc aaccatgtac ggtcggcgcg tcaggggcgc
     4201 gtacgaggcg tctgtaaagc gttgcatacc ggggctcgcc atcaggtctg gcagatagag
     4261 atctttgatg aacagggacg tctgtgctgt tcttcgcgcc ttactacggc gattgtgtga
     4321 cgttgtcacc ataaaagtgt gatgcatatt gcttttggtc aaaatgtgcg cagaaaaagg
     4381 tgatatactg tgcacgttta cacataagcg aggatgatat gtctattgat ttagacccaa
     4441 cccaactggc gattgaattt ttacgccgtg ataaaaccga actttctccc gcgcagtatt
     4501 tgaagcgttt aaaacagctg gagttagagt ttgccgatct cctcaccctc tctgcaaccg
     4561 aactgaaaga agagatctat ttcgcctggc ggttgggcgt gcattaatag agtctgtgta
     4621 ggccggataa ggcgttagcc gccatccggc tatgttacca ggcaatctca ccagacactg
     4681 tcccccggta atagataacc cccttgattt tgtgtaaaaa aaatacagat cgccatttgt
     4741 gctaaaaagg tgcgctctct ttatgagatt attcttatgc cccttcaaga gctaagccat
     4801 taagagtgcc ggagataagc gccggatggg gccggaaccc ttaagcctgt attgaacaga
     4861 cttaagggtt tttcttttcc gggcgcgtaa aaaactaagg tctgtcaata accgctggca
     4921 tgtcgtcagc cctattatta ttcaaaatac ggttagccag cacacctgac atcatcgatc
     4981 cgttaacgtt cagagccgtg cgggccatat caacgatagg ttcgatggca ataaaaatac
     5041 cgaccagcgc aacgggaaaa ttcaacgtcg acaggacaat cagcgccgcg aacgtaccac
     5101 cgccgccgac gccggctacg ccaatagacc ctagcgcaat ggcaggcaac atcgcggcca
     5161 gaaaatgcag cgagagcgga tcgatgccga tggtgggcgc aatcatcgct accataatag
     5221 ccggataaat cccggcgcag ccattttgcc ccatactgga gccaaacgag gcggaaatat
     5281 tggcaatggt gctttgtacg ccaaattttt cctgggcgga aatggccagc ggaatagagg
     5341 ctgcgctgct gcgggagaca aacgcaaagg ttaagacggg ccagaccatt ctgaaataat
     5401 gcgctggatt attaccgctg aggatcagca agatggcgtg cacgataaac atcatgaaaa
     5461 tcgcgatata acaggcgccg ataaaaccaa gtaagctggc gaattgttca aggcggtatg
     5521 atgaaaatac ggtggtcatt aatgccatga cgccataggg cgttaatgca ataacgatac
     5581 gtaccatctt catgacccag atctggatag cgttaatgcc tgcgcttaat ttctgacctt
     5641 cttccggcgc ctcttttttg acctttaaca gggcgatccc cgctattagc gtgaagataa
     5701 cgatgccgat aacggaaaca cttctggctc ccgtaagatc aagaaaaata tttgtcggga
     5761 tcagcgatgt cactaactgg ggaatcgaca ccgcggcagt cttattgact tcttctgtag
     5821 ttaacattga cggcatgtgc acaaaagcgc tggcgtcaag ccccagtata tgagcggtca
     5881 gtaatccgat aaaaccggca accatcacca ggcataacat gcatccgacg atcgtcagcg
     5941 acatttttcc gatgccggcg ctattttcca gtttattgat ggcggaaaga atagaaataa
     6001 aaattagcgg tatagcgacc agttttaaca gatggacgta gccattgccg acgatgctgt
     6061 accattcgat aatggtttta gtgtgatttg ctgaaataaa atgcagggat aaaccaataa
     6121 cagcccctaa aaagatagcg ataaaaacgc ttttcgacag ggaatcgctt ttttgattaa
     6181 ttctcaagat ggcccacgag aaaaccaaaa aaagtgcgat atacgcgagc gtaacaacca
     6241 tattttaagc ctcttgcctc attcagcacc tgaaatgccg gaaagagttt acataaacct
     6301 atagctcaaa ctgagttata gaaccgcagc ggattataaa gagcgcaacg ccaggtatcc
     6361 atacaaaaaa tggggttctg acctcgccgc ccggcaatgt cgacagccta ttaattaaat
     6421 agtcattttc tatacatctt ttcgtttttg acctgccaga acggttaatg tcttataaat
     6481 cattacttat caaaaagtta agtggttttt tgtctgtcgt atgacctggc ggacagggtc
     6541 tatgcttaat aaaaggcgct caatatgacc atttgttgga aagcccctgc ggttaagggg
     6601 ttgaagtgat aatcattatc actaacatgc tgttatatcc tggtgattta gaacgcgagg
     6661 taactctatg gaattgcatt caggcacgtt taacccggag gacttcccct ggcaagggct
     6721 gacgctaacg ccagcggcgg cagcgcacat acgtgaactg gcagcaaagc agccgggcat
     6781 gttgggcgtg cggttaagcg taaaacagac gggatgtgcc ggatttggct atgttctgga
     6841 taccgttcgg gagccggata aagacgatct ggtttttgaa gccgaaggcg caaagctttt
     6901 cgcaccgtta caggcgatgc cttttattga cggaacagaa gtggattacg tacaggaagg
     6961 gctgaaccag ttatttaaat ttcataaccc caaagcccag aatgaatgtg gctgcggcga
     7021 aagttttggg gtataggcgg tactatgtct cgtaatactg aagcaacgga agaggtcggc
     7081 atctggacag gcggacgcct taattacaaa gaaggatttt tcacgcaatt acccactgat
     7141 gaactggcaa aaggcatcag cgaagaggtg gtgcgtgcga tttccgcaaa gcgtaacgaa
     7201 cctgattgga tgctggaatt tcgcctcaat gcctatagag cctggctgga catggatgaa
     7261 ccgcactggc tgaaagcgca ttacgataaa ctgaactatc aggactacag ctattactct
     7321 gcgccatcat gcggaaactg cgacgatagc tgcgtttccc agccgggagc cgtacagcaa
     7381 acgggcgcga ataccttttt gagtaaagag gttgaagacg ctttcgagca acttggcgtt
     7441 ccggttcgcg aagggaaaga ggtcgccgtt gatgcgattt ttgactcggt ctccgtagcg
     7501 accacatacc gtgaaaaact ggcggaacag ggcattattt tctgttcttt tggcgaagcg
     7561 atacacgatc accctgacct ggtcaggaaa tatcttggca ccgtcgtgcc ggggaacgat
     7621 aacttttttg ccgcgctgaa tgcggcagtc gcttccgatg ggacatttat ctatgttccc
     7681 aaaggcgtgc gttgcccaat ggagttatcc acctattttc gcattaacgc tgagaaaacc
     7741 ggtcagtttg agcgcacgat tctggtggcg gatgaaggca gctatgtgag ttatatcgaa
     7801 ggctgctccg cgcccgtacg cgacagttat cagctccacg ccgcggtagt ggaagtcatc
     7861 atccataaag atgctgaagt aaaatattcc accgtacaaa actggttccc gggcgacaac
     7921 aacacgggcg gcattctgaa ctttgtgacc aagcgggcgt tgtgcgaagg ggaaaacagc
     7981 aagatgtcgt ggacccagtc ggaaaccggt tcggcgatta cctggaaata cccgagctgc
     8041 attctgcgcg gtgataattc tatcggcgag ttctattccg ttgcgctgac cagtggacat
     8101 cagcaggctg acaccggcac caaaatgatc catatcggta aaaacacgcg ctcaaccatt
     8161 atctcaaaag gcatttccgc cggccacagc cagaacagct accgtgggct ggtaaaaatt
     8221 atgccgacgg caaccaacgc ccgaaatttc acccaatgcg actccatgtt gattggcgcg
     8281 gactgcggcg cgcatacgtt cccgtatgtt gaatgccgca ataacagcgc gcagctggag
     8341 ctcgaggcga cgacatcacg catcggtgaa gatcagcttt tctattgtct gcaacgcggc
     8401 atcagcgaag aagacgctat ttcgatgatc gtcaacggtt tctgcaaaga cgttttctcg
     8461 gaactgccgc tggagttcgc cgttgaagcg caaaaactgc tggcgattag ccttgagcac
     8521 agcgtcggtt aatgatgaag gaaaacccat gttaagcatt aaagatttac aggtcagtgt
     8581 ggaagaaaag gcgattttgc gtggcctgaa tctggatatt cgccccggcg aagttcacgc
     8641 cattatgggg ccgaacggtt ccgggaaaag cacgctctcc gccaccctgg cgggacgtga
     8701 agattatgag gtcaccggcg gctcggttac gttcaaaggt aaagatctgc ttgaactgtc
     8761 gccggaggaa cgggcgggcg aagggatttt tatggccttc cagtacccgg tagaaatccc
     8821 cggcgtcagt aaccagtttt tcctgcaaac cgcgctgaat gccgtgcgcg cctatcgagg
     8881 gcaggcgtcg ttggatcgct ttgattttca ggatctgatg gaagaaaaga tcgcattgct
     8941 gaaaatgccg gaagatttgc tgacccgttc ggtaaacgtc ggtttttccg gcggggagaa
     9001 aaagcgcaat gatattttgc aaatggcggt gctggaaccg gaactgtgca ttcttgatga
     9061 gtcggactcc ggactggata tcgatgcgtt gaaaattgtg gcggaaggcg tcaacgcgtt
     9121 acgcgacgat aaacgcgctt ttattatcgt gacccactat cagcgcatac tggactacat
     9181 caagcctgat tacgtccatg tcctctatca ggggcgaatt gtccgttccg gcgattttac
     9241 tctggtcaaa caactggagg agcagggtta tggctggctt accgaacagc agtaaagcgc
     9301 tacagcaatg gcagcatctc tttgaagaaa aaggagaaat tcgaactgag caggcaagac
     9361 aacatttcca acagatgtta cgtctgggat tgccgacgcg taaacatgaa gactggaaat
     9421 acacgccgct ggagggctta acccatagcc agtttatcca gcagtgtgcg actatcagcg
     9481 ccgcccagcg tgatgcgctg gcgctgcaaa tcgatgccgt gcggctggtg tttgtcgacg
     9541 gacggtttat gccagagctc agtgatagca cgcaaaacag cggatttgac gttagcgtca
     9601 gagatgagcg ccagacgctt gccgcgccgg tacatcccga ggtttttctg catctgacgg
     9661 aaagcctggc gcaatgtgtc acgtatatac aggtacggcg aaatcagcgt ccgaccaggc
     9721 cgctactgtt aatgcatatc acgcagggcg tggatagcga cgagctgaat accgcgcatt
     9781 atcgccacca tctgacgctg gcagaaggcg cggaagcgac ggttattgag cattatgtca
     9841 gccttacagc ggcaaaacat tttaccggcg cgcgtctgac gatgaacgtt gcagacaatg
     9901 cgcaactgcg tcatatcaaa ctggcgtttg aaaatgcgtc cagctatcac tttgcgcata
     9961 acgatcttct gctggcgaca gacgcctcgg cgtttagcca cagttttctg ctgggcgccg
    10021 cagtactacg tcaccacagc agctcacaac tgaatggcga aaacgcgacg cttcgactga
    10081 atagtctggc gatgccagtg aaaaatgaag tctgcgatac gcggacatgg ctggaacata
    10141 acaaaggcta ctgtaacagc cgccagttgc acaagaccat cgtcagcgac aaaggacgcg
    10201 cggtctttaa tggcctgatt aacgtggcgc aacactccat taaaaccgac ggccagatga
    10261 ccaataataa cctattgttg gggaaactgg ctgaagtcga taccaaaccg caattagaga
    10321 tctatgccga tgacgtgaag tgcagccacg gcgcgacgat cgggcgtatt gacgatgagc
    10381 agatgtttta tctgcaatca cgcggcatca ggcagcagga ggcgcggcac atgattcttt
    10441 acgcgtttgc cgcagagtta acggaagcta tccatgatag cgcccttaaa cagcaggtgc
    10501 tggcgcgaat cggccagcga ctgcccggag gcctggtatg acatttcctg tagaaaaagt
    10561 acgggcggat tttcccatac tgcagcgtga agttaacggc ctgccgctgg cttacctgga
    10621 cagcgcagcc agcgctcaaa aacctaatca ggtgattgat gctgaatctg ccttctaccg
    10681 tcacggctat gctgcggtac atcggggtat ccatacgtta agcgcgcagg cgaccgaaag
    10741 catggagaat gtgcgtaagc aggcgtcgcg gtttattaac gcccgctccg cagaagaact
    10801 ggtgttcgtg cgcggtacga cggagggcat taaccttgtc gccaacagtt ggggaacgga
    10861 aaatattcgc gccggggata acattatcat cagcgagatg gagcatcacg ccaacatcgt
    10921 tccctggcag atgctgtgcg agcgcaaagg cgctgaactg cgcgtgatcc cattgcatcc
    10981 tgacggtacg ctgcggctgg agaccttagc tgcgctgttc gatgaccgga cccgactgct
    11041 ggccattacc catgtatcta atgtgctggg gacggaaaac ccactgccgg acatgattgc
    11101 gctggcgcgc cagcatgggg cgaaagtgct ggtggatggc gcccaggccg tgatgcacca
    11161 tgctgttgac gtccaggcgc tggactgcga tttttacgtt ttctccggcc ataaacttta
    11221 cgggccgacc ggcatcggca ttctgtatgt taaagaggcg ttgctgcaag aaatgccgcc
    11281 gtgggaaggg ggcgggtcga tgatctcgac cgtcagcctg acgcagggaa cgacatgggc
    11341 gaaagcgccc tggcgttttg aggcgggaac gccgaatact ggcggcatca tcggtctcgg
    11401 cgcggcgatt gattatgtga cgtcgctggg actggataag attggcgatt atgagcagat
    11461 gctgatgcgc tatgcgctgg agcaactggc gcaggtgcct gatatcacgc tatatggccc
    11521 ggcgcagcgg ttgggcgtca tcgcgtttaa tctgggtaaa caccacgctt acgacgtcgg
    11581 cagctttctt gataattacg gtatcgcggt acgaacgggg catcactgcg caatgccgct
    11641 catggcctgg tatggcgtgc cggcaatgtg ccgggcttcg ctggcgatgt ataacaccca
    11701 tgaagaagtg gaccgactgg tggcaggatt aacgcgtatc caccgcttat tgggataaca
    11761 gtgaggtttt atggctgcgc taccggataa agaaaaattg ctgcgtaact ttacgcgttg
    11821 cgctaattgg gaagagaaat atttatatat tattgagttg gggcagcgcc tggcggagtt
    11881 aaatccgcag gatcgcaatc cgcaaaatac gattcatggc tgtcagagcc aggtgtggat
    11941 cgtgatgcgg cgaaacgcca atggcattat cgaattgcag ggcgacagcg acgcggcgat
    12001 cgttaaaggc cttatggcgg tggtatttat tttgtaccac cagatgacgg cgcaggatat
    12061 tgtgcatttt gatgtccggc catggttcga aaaaatggcg cttacgcaac acctcacacc
    12121 ttctcgttct caggggctgg aagcaatgat tcgcgcaatt cgcgctaagg ccgccactct
    12181 tagctaaact atacagacag cgttctacct gatgtcaaat cctttgtcgg acggcgacgt
    12241 cgctttatcc agagtggaca gagcgtatat tttgttgttc tgataagcga agcgctacca
    12301 gccgtcgcag agggcatcac caggaataca ggaggtttgg tatgaaacgt gcgtctttca
    12361 ttacgctaac tattatcggc gcgtatagcg cgttacaggc agcctgggcg gttgattatc
    12421 cattaccgcc agaaggcagc cgtcttattg gtcagaatca aacctatacc gtacaggaag
    12481 gtgataaaaa cctgcaggct atcgcccggc gttttgatac ggcggcgatg ctcatccttg
    12541 aagcgaacaa tacgattgcg ccggtgccta agcccggtac gctaattacc attccctcgc
    12601 agatgctatt gccggatgcg cccagggaag gcgtcatcgt caacctcgcg gagctacggt
    12661 tgtattttac ccgccgggag aaaaccgcgt tcaggtgtat cccatcggca tcggtttgca
    12721 gggactggaa actcccgtca tggacacccg gatagggcaa aagatcccca acccgacgtg
    12781 gacgccgacg gcaggcatac gccaacgttc gcttgagcgg gggatcacgc tgccgccggt
    12841 gatccctgcc gggccaaata acccgctggg acgctatgcg ctgcgtctgg cgcacggtaa
    12901 tggggaatat ctcattcatg gcaccagcgc gccggatagc gtaggtctgc gcgtgagttc
    12961 cggttgcatt cgcatgaacg cgccggacat caaagcgtta tttgcgcagg tcagaacggg
    13021 gacgccggta aaagtgatta accagccggt gaaattctct gtcgagccga atggcattcg
    13081 ttatgtagag gtacacaggc cgctatcgcc ggaagaagag caaaacgtgc agacgatgcc
    13141 ctatgtgttg cctgcggaat ttaccgcgtt cagaaacgcg caaggggtgg atagtcgcct
    13201 ggtcgataag gcgctatacc ggcgagccgg gtatcctgtc agcgtgagcg ccggacagac
    13261 gccagcggta aatacgaccg cagtcgaatc cgctcagaac ggttttgtcg gggaagaggg
    13321 gcaaacgcgc gcgacgcagt agccttcgca gtaaatgacg gacaaaaaaa tggcgcacga
    13381 tgtgcgccat tttatatcat gcgtcaaatc atttacagat gcggaatact ttgttgtcca
    13441 gacgttggtt agcgcgagct gcgtcgtctt tagcagcctg aacgtcggaa cgcattgcat
    13501 ttacgtcatt actcagttga tcaactttag cgctcagcgt ctgtacatcg gaagacaact
    13561 gatcgatttt agcgttgctg gaacaacctg ccagtaacgt ggaacccaga actactgcac
    13621 ctaagatcag tttgttagtg cggttcataa caataacctt atattttgtg tggttatata
    13681 ggtaaaaaaa atggcgcacg atgtgcgcca tttttattac gcaggtacta ttacttacgg
    13741 tatttagtag cctggttgtc cagacgctgg ttagcgcgag ctgcgtcgtc tttagcagcc
    13801 tgaacgtcgg aacgcattgc gttcacgtcg ttgctcagct ggtcaacttt agcgttcaga
    13861 gtctgaacgt cagaagacag ctgatcgatt ttagcgttgc tggagcaacc agccagcaga
    13921 gtagaaccca ggattaccgc gcccagtacc agtttagtac gattcattat taataccctc
    13981 tagattgagt taatctccat gtagcgttac aagtattaca caaacttttt tatgttgaga
    14041 atattttttt gatgggaatg cacttatttt tgatcgttcg ctcaaagaag catcgaaatg
    14101 catgaaagtc cctaaaaaac cgaaagaaaa cagggggctt ccatcggatt cttcttagat
    14161 aatccgcaat tagatagtaa aatccgattt gattttttta ttaatagtgg ctatcgatta
    14221 aataaaaaaa gcgccggaag ggcgcttttt taaacaaatt aattcacaca acaattatta
    14281 cagtacgtga acagaggcgg tgttagtggt gccgcttgga accagcgcgc cggagaccat
    14341 cactacgacg tcgcctttct gggcgaggcc gctttgtagg gcgacatctt tgcccagacg
    14401 gtagaaatca tcagtagaat tgatttcttt caccagctgc gataccacgc ctttgctcag
    14461 tactaactga cgggcggtca cttcattggt ggtcaatgcc aggatggtgg cgtccgggaa
    14521 gtatttacgc acggcgcgag cggatttacc gccctgggtc gctaccacga tcagcggcgc
    14581 ttccaatttt tcggcggttt ctaccgcgcc gcggcatacc gcttccgtaa tgcgcagttt
    14641 acggctgtcg ttgttgtagt ccagacggct gttcatgacg cggtcggtac gttcgcagat
    14701 ggtcgccatg atagaaacgg cttccagcgg gtatttccct tttgcggatt cgccggacag
    14761 cataaccgca tccgtaccgt cgaggatggc gtttgcaaca tcgcctgctt ctgcgcgggt
    14821 cggacgcgga tttttgatca tagaatccag catctgagtc gcggtgatca cgactttacg
    14881 tgcgcggata catttttcga tcatcatttt ctgcgcaaag atcacttctt caaccgggat
    14941 ttctacgccc aggtcgccac gcgcaaccat gatgccgtcg gaagcttcga gaatttcatc
    15001 gaagttgttc aggccttcct ggttttcgat cttagagata atctggatgt tttcgccgcc
    15061 gtgggctttc agatgctcgc gaatttcgac aacgtcagaa cgtttacgga taaaggacgc
    15121 agcaacaaag tcaacgccct gttcgcaacc gaagatcagg tcctgtttgt ctttttcagc
    15181 cagcgccggc agagcaatag aaacgcccgg caggttaacg cctttgttct cgcccagatc
    15241 gccgttgttc agcaccttac aaatgacttt attgccttcg atggcggtca cttccatacc
    15301 gatcagacca tcgtcaacca ggacggtgtt gccaacgctc aggtcgctgg tgaagccttc
    15361 ataggtgacg gcaacgattt cattattacc gaccacggat ttgtcggtgg taaaagtaaa
    15421 ggtttggccc gctttcagcg aaacgtcgtt accgccttcc agtttaatgg tgcggatttc
    15481 tggtccttta gtatcaagca gaatagcagc ttttttacca gttttgctca tcacgttgcg
    15541 caagttctgg atacgctgac cgtgttctgc ataatcgcca tgagagaagt tcagacgcat
    15601 cacgttcatg cccgcgtcca gcattttgct taacatctct tcggattcgg ttttcggacc
    15661 gatagtacaa acaattttcg tctttttcat gacagtctta gtctttaagt tgaggaggat
    15721 atggaaatct ggcttcgggc gcgcacggcc cgtaagctaa gcctgtgttg ctaaagtgat
    15781 gatgcctcgc tctaaggata ggtgacatcg aaagagcgtg cagaggaatg tgtgctcgcg
    15841 tttcagccca acgggaaggg gataatttta gtcgttgagt tttacagtcc aatgcgctga
    15901 aaccattcaa gagacaattg gcgcgcatta tacgctgaaa tttacaaaaa aggaaaatga
    15961 aaaccctgtt tcaaaagaca tctgtgcaga tccacaacgg tttgttatta cgctgtttac
    16021 gatgtcgctg gcgatgacgc cgcccgaaca ggggcggcgt tgcgcaacag ctggtgttgt
    16081 tgcgcataat gtcaatcgag caactttttg ccttccaggt cgatggcgat gttttggttg
    16141 tatgcttttc ggtagcacag tatcgctatc ccgatcgccg cccagctaat tccgagtatc
    16201 agagcgtgaa tgttcatgtt taaacagacg tagccgatga cgatcatccc catgatcggc
    16261 gaaatgacat gggcgaaaat gcgccgctgg gctttcatcc ggaaattgaa caggataaac
    16321 acacacaggt tcacgacaaa aaaagcgaaa agcgcgccaa agttcaccag cgtggagata
    16381 gattcaatct tgccggaaaa caggtagctg agcagcaggg tgacgccgcc ggtaaacaga
    16441 atggcataat ccggcgtttt acgcgtggta tggacgtgag cgaggaaggc gggcaacatt
    16501 cggtcgcgcc ccattgaaaa taacactctg gacaccgccg tttgcgcggt aataatgttg
    16561 ccgacggcgc acacaaacgc cacaatgatg gaaaacgcca ctttgagcca gataccgcca
    16621 acgttgccgg caatggtgaa aaatgcttca ttcgtcgcat taccttccgc gaagcggtcg
    16681 acgttaccgg tggcgaacgc cgcaaacgcc acaacgataa taaacagtac cgtcgccaaa
    16741 actaacgcca acagtgttgc tttactgacg gcgcgtcccc cgccttcgct ttcttcactt
    16801 aatgtactga tagcgtcaaa gccgagaaaa ttcagcgcag ccaccgaaat cgccgttgcg
    16861 atgagcccag gggtgaacca ctgtgaatcg aaaaaaggcc ggaaggaaag cgttatctga
    16921 ctactgtcct gcatcatcag acggataatg agtagcacga aaatcgccag aataccgagt
    16981 tgaataaaga ccagtaactt atcgaatttc gccgtttgct gtatcccgag atagttgact
    17041 ccggtgccaa tagccacata aatcaacggc cagacccaga ccgggatttg cggtaaaata
    17101 gcgtggaccg cgacaccgcc cagcaccgct acgagcgtag ggaacaaaag ataatccagc
    17161 agtaatatcc atccggtcag aaaccctacg gcgggattaa tgcatacgcc agcatacgca
    17221 taggccgaac ccgacgagga gatatgctgc gataaggtag agtagctgta cgcggtaaaa
    17281 aacatcgcga tagcgccaat aatataaacc agcgcaacca taccgtgcga aagattataa
    17341 acgacgccat aaagagagac tggtgcgata ggcaccataa acaccagacc ataaagcact
    17401 aaatcggtaa gagacaattt tttgactttt ttcatgataa atatcttaat ggctttttat
    17461 gccagatcgc gtaaaaacgc gcttacctct gcgaggcagg gcgcgatatt ttcttcatgc
    17521 gggttatggc tgctgccagg aatagtgacc gcgcggcagt ctgaaatgtg agagagcagc
    17581 ggagagacga cgcgctcggt tgcctgatcg ttttcgccgc gtagtaccag aacaggacag
    17641 cgtatctggc acaaatgggg cgtaatatcc cagtcggcaa gtttgccatt tgccgccagt
    17701 tcattggttc cccataaaat gtgataaccc gtagggtcgg cggcgaactg gccagtatcg
    17761 tcccgcgaag cccggcaggc tgtaagcagg cgtgctctgc ggcaagcatt ccgccccagg
    17821 aatgtcccag tatcgaatac ccgtgcccaa tacccaggtg atgaattaat tgggttaatt
    17881 gacggagata acgcgcaata gtccagaaag acgcgtcggc atgaggaaaa tgcgttgaac
    17941 gaccgcaacc atattgatcg taaaatatta ccatgcgccc gtcatcagcc agacggcgat
    18001 aatttaataa ataatcaaag ccgccagaag ggccgccatg aaggataatg agcggcgtga
    18061 gtaatgattt tctgtcgcca taaatccgat agcttgtcaa tatgttttca gaaaacattt
    18121 cgccatagag ataagtatca ttcatattct taatgactca gtgtgtggca gggcaggcga
    18181 aatttatatt cgcctgggta atattatttt tttattgtgt gtaaaacatt acaccagaag
    18241 gtggcgtaat gttcccattg cagaaactgc ggacttcccc agtgcggcga acaatcactg
    18301 gcaaagcaac atactttccc tttatggtaa gtacccataa ctaacagtgg atcgccatta
    18361 atttcagcaa ggacctgact attttctttg gcgataagct tgttatagcc caacagcggc
    18421 ggccattcgc taaatggctg ggtaataaca tgttttaccg cagtatttac tgctttacat
    18481 ccttgcggta gttctacgcg gtcatctaca tccagcatat caaccggcaa tacctccgcc
    18541 agaaccgtat ttttataatt ggcttttgct tctattcccg taaaggataa atacccgccg
    18601 atcattaaca gaccgccgcc ctcagcaaca taatcggcga taagttgtaa tgcatcagga
    18661 ataatgtcca tattataaaa ggttctgttt tgtaacagga acgtattgct accgatatca
    18721 ctgatgacga tcgcatcata gcaggctaat gcttcggcgg tttgtggaaa acgagtttgc
    18781 acaatatggg caggcatgta gtccacatcg atattaccct ggcgtaagca ggataataaa
    18841 tagtctgcgc cttcttcgta tttgctcgat gtaaagctat caaaaccttt agagtgaatc
    18901 atatgaatgt gccaggattc gccaataaat aagattttca ttatgtcacc tgttaattaa
    18961 tgtgaatgac tttattagat tgggtacgca ttcgatgtaa aacctgcaag tgctgaggca
    19021 tactcgacgc accgacttgt tccaccgcca gagaagcgaa agcggaggca tattgaatgg
    19081 ctgcgaccat atctgcttgt cgcgccagcg cggcggctaa ggcgccatta aaagcgtccg
    19141 gcggcatctt ttaccacggc gctccacgca ggaatataca acgtgcgggc gtgctcacag
    19201 agcagagaac cacgggcgcc aagggtaatg atgacttttt tcaccccgga ttgcagaata
    19261 atatttccgg cttttttcgc atcattaata tcagtaatgg ttacgccgga taaaaaagag
    19321 gcttcagttt cattcggcgt gatgatgtca atatcagata ataaatgcgt cacctgtttc
    19381 gtataggggg caggattcag catgatcatt ttattttctt gtttgcccag gcgaataaat
    19441 tcagtcaacg cttcaatgtt cgtttcgagc tgcattaaca taacgtcaga ctcggcgata
    19501 taacggtgtt gctcgttaat ctcttgcgtg gtgagcatca tattggcgcc agggtagatg
    19561 gcgataatat tatcgccatc cacggcggag acatagatca atgcgctacc ggtgggcgct
    19621 ttatctgttt gatacgcgct gtatgaggtg gtgcctgatt gaataatatg attcatagca
    19681 aatgcgctga actgatcttt gcccacttta aaaataaaat gcgccgcagc accagcattg
    19741 tttgccgcta aagcctggtt ggctccttta ccgccaggat agaatccaaa ttgactggcc
    19801 agaatggatt ctccgctttg tggaaaccac ggcacggttg ctgaaacatc aatattgaat
    19861 gagcctaaaa cacacacctt gcctgctttt tttgtgtttt cccggtgcag ttttgcatcc
    19921 tgatggattg gcgtggcgat agtgctggag atatcaatct tattttcagt gataagctta
    19981 ctcagcgcgt cacggtttaa aatccctccg ccatagcaac gctgaagcat acctgatttc
    20041 tggaaatagc gtagatcgga acgaatagtc tcctggctaa ccttataaag gtctgaaagt
    20101 ttactgacgc taacactatt atcctttatc agtaaattaa tgatggcatg acgtctttct
    20161 tctttaaaca tattgcctcc gggtagtgag ttgaattgta tttatggcaa tattgtcatg
    20221 cggtgaattc aatcacagat tatgcggtca accggaagta atcccaaatg aatgtcaata
    20281 atcagaagcg cagccaatgt gttaaatatt aattgcttac agaaggggaa aatagttttg
    20341 tgagtgttgt catatatttt ctatgtaata tgacggggtg aacgtaaaat agttgggctt
    20401 gcacgattca gtgagtatat gcagccggac agcattcgct tatcagtcgc taccctcgac
    20461 gaaataagac gatatcgctc tccggccctg gggttatata cgctcgattt ttgccggcag
    20521 cccctgacgt accgccgcgc cagaaaccca gtcgagccag gtgttggtaa tggttcttgt
    20581 cggatcagca aagcccagat cgttaagatt tatgcctgcc ctgatttgtg gatcatacgg
    20641 cataggcacg ccgtccagag agtgctgcgt tgcgcccatc tcgcggtggc catatccgtg
    20701 ttcgatggcg atgacgcctg gcatcacgcc atttaacaaa ctgatttgcg ccacgacctg
    20761 accgcccggc gtaatgatcc gtacccgatc gccatgttgc agtccataac gctcgccgtc
    20821 ttgcggattc agcgccacca ggtttgctgg cttcacatgg tgtaagcgcg ggatgacggc
    20881 tgttgagctg gacatggtat ttgatttaaa tgaaatcagt ttcagcggcc actgtccaat
    20941 gggaaactgg tcgtcaatcg cacgaccatc tgacagacgc gccggatacc agaccgggca
    21001 accgctgaag cgctccccgg tgatggcgtg acggtgggcg gcgacatctg cattccagat
    21061 ctgtaagggt tttttccacg cgttacctaa ccgttgctcc gtatagccgc tatcttcggg
    21121 cgcaaaccgg ccgccacgcg agtagataaa cgccacgcga ccgacctcat cagctttaag
    21181 cgtgtgctga attgctggca gaatgcggct gacgccggta agcgaaatat cttcctgatt
    21241 tgccagcgcg accggcgtct tgcccataaa ggcgatatta gcggctacgc gcagatagaa
    21301 gtcttccgcc cggttcagtg gaaaagtatt gccctgcgga tcggttatcg cccggtcgcc
    21361 gaagccgggc agatggagcc gttttgctac cgcaatacaa aatgcttcca ttgagacagg
    21421 ttgcccgtcc gccgttcggt gagtggcggg ggcgacaacc ggccagcggg cggtagtggc
    21481 tttactggct acgccgcccc agggcgccgt aaagccccag ctctcaaaat tgtgcgtatc
    21541 cggcacaatg taatccgcca gcgccgtcgt ttcattcata aaggcgtcaa tcgcgataaa
    21601 gagcggcagt cggcgagggt cttttagctt ttcttccgcc acggcgcgta gaccgggaac
    21661 accgtaaaac gggttgctca tattggaaat ccaggcttta agcggataag gatagccttc
    21721 gagcgcggag gtcaacagtt cggtaagctg gcctgccaca aagggatacc atggcgcttt
    21781 ggctggataa ggggattgcc cgccggcaat tttgtcgcgg tattcttccg atgctttata
    21841 agcggttttg ctacgggcaa tactcaaccc ggacggtttc acttttccgg caaaactgtt
    21901 catgttgtag cgggggccgt cgctaacgcc gttgaatttg ccgccgccga caaagacgcc
    21961 gccggacaag ctgaggttgc cgatcagcgc gttaagcatc atgactgacc aggtgttata
    22021 aaacccattg ccggccatca tgccgccgtg actgatgacc gcagctttac gtccgtgact
    22081 gataaaggtt tccgccagcg cgataatttg cgcttccggc acgccgcact gttcgctgta
    22141 ttgcgccaac gagagctttt ctgccgcctc tttcaggcgt tgcaacccgc tcttcaccgt
    22201 gacccgttgg ccgtcggcga gcgtaacgta ctgcgtcacg aaaagccgtg cctgtcggca
    22261 agtggacgca tcgaccaact cgccgtcggt attcagcacg acgggggtct cttcgccatc
    22321 gggcgtaaga tggcgcagcg tcaggtgttg tccggcaagc gtcggcagtt catccgcaat
    22381 gaccaggtgc gtggcgttgg tccaactttg ctcgccggcc tgctgcatcg cctgtacgcc
    22441 gggaatcgcc agataatcag cattataacg ttgattatcc atgatccagc ggatcatccc
    22501 cattgccagc gccgaatcgc tgccgggcat gaccggttgc cagcgaccgc gaggatcggc
    22561 gagcaccgtt gataagggga gggcgggggc gaccacgacg tattgaaaat tctcacgcag
    22621 ccgggcgctc gccaactgac gcgcctggcg tttaaaggga ttaccggact gtgccgggga
    22681 ggtgcccata aagagcgcaa actccacgtt ttcccagtcg ggtttgacat gcgggttttt
    22741 atccagatcg cccatcaatg ccccggagcc ggcccggtaa gccagtccac agtaggcgcc
    22801 atgcgcgccg aaattcttgc tgccgaagct atttagcgca aaacgacgca gaaacgcatc
    22861 gcggccttcg tcgctggtat tcgtgaccag taactgattg gttttgggcc cgaaactggg
    22921 gtgctttgcg tcaattggcg tatccggcgc atgaatagcg cgcagtccgt ccacatgacc
    22981 ttcgccaaac agatcgccgc cttccacgac ttcttcaata agctgctcaa agctgatgcg
    23041 ctgccatttc ccttcgccgc gtttacccac gcgtttcatc ggttcaagca gtcgcagcgg
    23101 actgtacagg ctttccagca gcgtggcgcc gcgcgcgcag gcggttgagc gggcgtcaag
    23161 accgctttct cccgccagtt gctccatggc ttcgctaaaa gggacggacg agtcaatcgg
    23221 gtgttcctgc gacaaggggt gatagggatt gccggcgatg cgtattactt tgccatcggc
    23281 atttacccgg gcgcggatac cgcactgtgt ccaacagccg aagcattgcg tcatggcgat
    23341 ggtttgttgt ggattttgct gccagtgcgt ttgtgcctgc gcctccggaa ttaacgcgtt
    23401 gccaaagatg cggtcgcgcg ttaccttgcc ggatgtcccg tttaacaggc catcaattgc
    23461 gcgtttcgcc acatcacggt agctcagacc aaaagtgacc atcccaccga cggcgagacc
    23521 gacttttagc cactgacgac gggttaaatt agccatgttg taatctcctg gtgagtccgt
    23581 tcagcgtttc acgaatacta atcagtagcg ctatccacag gccgaaggtg ccgagaatag
    23641 ccagccagcc atccgttccg cctggtaacg tgtaagggtt aaattgcgcg ttgaacttgg
    23701 gtacggtttg tacctgaatc aacaatgtcc agcgcatcag ccaacatagc gccagcgcgc
    23761 tcagaaccag caggacgcgt cttagctccg ataacggatg acgtagcgcc aggctacaga
    23821 acagcagtgt gaatacccac agcgctagcc agccgacagc gtaatatttg gctgacaggg
    23881 cgacggtaat ccactgacgg attgccgtgc cggaaagcgt atcgccgctg acccacatgg
    23941 ccacaaccag ccccagcgcc gccagcgtcc agagttgtcc ccacagtatt tttggcagcc
    24001 ttaccgagtc gcgtcgggcg gcgacaatca tcagcgcgaa gaacgcctgt aaggcgctaa
    24061 gaaacatcgc cacggggaag gcgtagctaa accagattgg gcgcgccagc acaacggaga
    24121 cttcgcggcc ggtataaatc aacaggccca ccgcgcaaag cgcgctggct aacgccaacc
    24181 atttagtgac gttgtaactt ttattgaata atcgttttat ttgctgcgcc aggaaccaca
    24241 gagcgagaaa tccggtaaac agcggcagga acaacgctcc ccagggcatc cacgaccagg
    24301 gcgtcggcca ggcatagaaa tgccagacgc gggcggtctg gtgcagatcc gccgtcagcg
    24361 ccagcggtgc ggtaatcgca caggtaatgg caatcagtaa tgcccgattt tcttctgttg
    24421 cggcgtcttt tttccgccag tgaagataac aggcaaacag tgcggcgcag gcggcaatgc
    24481 caataaaaaa gaaatattgt accgcccacg gcaaccagct aatgtcctgc gggtgagcca
    24541 gcacttcttc aatgatgagt gaatgcgtca ttcagacctc ctgccaaagc gcgggctgcg
    24601 cacggcccat taatggggtg acaaaggcgt cgtccagacc caggtagaaa acatggggcg
    24661 acgtgccgtt ttccggcttt aataccttga tagcgtcgcg atgttgatga agcatggtgg
    24721 cgatgcggct atggggatct ttgatatcgc caataatacg cgcgccgccg acgcaggact
    24781 ctacgcaagc gggtaacagt ccggcttcca gacgatggac gcaaaacgtg catttatcgg
    24841 cagtttgcgt ttcatgattg ataaatcggg cgtcgtaagg acacgcctgg acacaatagg
    24901 cgcagccgac gcagcgtttg ttatccacca ccacaatgcc gtcttcccgc tgaaaggtgg
    24961 cttgtaccgg gcagaccggc acacaggggg ggttatcgca atggttgcac agacgcggca
    25021 acagcacatt cgtgacttcc tgactacctt cacgctggac ctggtattgg ttcacggtcg
    25081 tacgaaacgc gccctgcggc gtttggtttt caatagtgca acttacggta caggactgac
    25141 agccgataca acgccgcagg tcgataagca tggcgtaacg gtgtcgggga gagccttcat
    25201 gccgctccgg cgaaaaagga aatttcgctt cagccagcgg aaccagcgag gcgccagcgg
    25261 tcaggacgcc gagctgctgg agaaattgcc gtttactgct gtccatattg actcccgtcc
    25321 acattgccaa caatgaaaca tttgtcacga tgttggttca tgtgtaatga ataaaaaatg
    25381 ttgatgattt acagtgtaaa aatcgagacg gggtgcgctc tattgtggtt aaccacatac
    25441 ccggcttgtt gttgatctaa aacaacataa ttgacaggga tattggggtg agaggtaaaa
    25501 ccgtaaggcg cctggcggtg ttggcggcag tagggctact ttgtcatggc gcgtgggcag
    25561 ggacgtggaa tatcggtatt ttggccatgc gcggcgaggc gtctacgcgt agccactggc
    25621 aaccgttggc aaagacatta agccaacagc ttccaggcga aacctttcac atccagccgc
    25681 tggatctgca tcaaatgcag gaggccgtta accagggaac cgtgcagttt gtgataacca
    25741 acccggcgca atttgtccaa ctgaacagcc atgcgccgct gcgctggtta gcttccctgc
    25801 gttccacgcg cgatgggaaa gcggtgagca atgttattgg cagcgtgatt ttgacccggc
    25861 gcgatagcgg catcaccacg gcgcatgatc tcatcggtaa gacagtcggc gcgattgatg
    25921 ctcaggcgtt tggcggctat ttattaggct ataaagcgct cagcgacgcg ggcttacgcc
    25981 cggagcgcga ttttcatctt cgttttaccg gatttcctgg cgatgcctta atctatatgc
    26041 tgcgcgaaaa agcggtgcag gcggcaattg tgccagtgtg cctgttagaa aatatggatc
    26101 aggaaggatt gattaataaa aaggacttta tcgcgctgct ttcccgaccg acgcccctgc
    26161 cttgcttaac cagtacgccg ttatatcctg actggtcgtt cgcggcgcta cctgcggtaa
    26221 gcgatgcgct ggcggatcgc gtaacgcgag cgctattcaa cgcgcccgcc gccgcgtcat
    26281 ttcactgggg cgcgccagcg tcgaccagtc aggtggaagc gttgctgcgt gatgttcgtc
    26341 agcaccctca gcagcgtcga ctgtggctgg atgtcaaaag ttggttaatc cagcaccagc
    26401 taatggtcgg cggcgtgatt ttggcgttcc tgttgctcac gctcaattat atttgggtca
    26461 tgctgctggt gcgtcgacgt ggaaagcaac tggaacgtaa tagcgtagtt cttcatcagc
    26521 atgagcgggc gctggaaacc gcccggcaaa tgagcgtgtt gggtgaaatg acctccgggt
    26581 ttgcccatga gcttaatcag ccgctttccg cgattcgaca ttatgcccag gggtgcctga
    26641 ttcgactgcg cgctgcagat gaacagcatc ccttgctgcc ggcgctggag cagattgacc
    26701 agcaggcgca acgcggtgcg gatactctgc gtaacctgcg tcactgggtc agccaggcgc
    26761 agggcaaccc ggtgctaacc gaagcgtgga aggccatagc cattcgcgag gcgattgatc
    26821 atgtctggca attgttgcgt atggcgcaac aatttccgac agtgactctg cataccgagg
    26881 ttagcgctgc gctgcgcgta acgctgccgt cagtgctgct ggaacaggtg ctggcgaata
    26941 tcattcttaa tgcggctcag gcgggcgcca cccatttatg ggtcgttgct gaacgcactg
    27001 aaaacggcat cagtattgtt ttacaggata acgccggggg aatcgacgag gcgctattac
    27061 gtcaggcgtt tcagccgttt atgaccaccc gtaaagaggg gatgggctta gggctggcga
    27121 tttgccagcg gctggtgcgg tatgggcggg gcgatatcag catcaggaac cagaccgcgc
    27181 cggacggtct gtcgggaacg gtggtcacga tacatttctt acatgaacat gggggcaggg
    27241 atggcgacaa ttcatctact ggatgatgat acggcggtca ctaacgcgtg cgcgttttta
    27301 ctggaaagtc tgggatatga cgtaaaatgc tggacgcagg gggcggattt tttggcgcag
    27361 gccagtctgt atcaggccgg ggtcgtatta ctggatatgc gaatgccggt actggatggg
    27421 cagggcgttc atgatgcgtt gcgccagtgc ggaagtaccc tggcggttgt ttttcttacc
    27481 gggcatggcg atgtaccgat ggccgtggag cagatgaaac gcggcgccgt cgattttctg
    27541 caaaaaccgg tatcggtaaa accgctacag gcggcgctgg agcgtgcgct gacggtttca
    27601 tcggcagcgg tggcgcgccg tgagattata ctgtgttacc agcagttgac gccgaaagag
    27661 cgtgagctgg ccagcctggt ggcaaaaggg tttatgaacc gtgaaattgc ggaagcgatg
    27721 aatatcgcgg tgcgtaccgt agaggtgcac cgcgccagag tcatggaaaa aatgcaggcc
    27781 ggtagcctgg cggaactgat taggcgtttc gaaaaaatgg cctcgccaga gaccagaata
    27841 cgaacaacgt atgagccatg aataataaac tgcgttattt ctttgatttg catcaaattt
    27901 tgtttaattg agaagactgt tatattctgt tggtttgagc tggcgacgag taaaacgtat
    27961 gacaaaaccg acaaaagatg acgaactgta ccgcgagatg tgccgggtgg tgggcaaggt
    28021 cgtgctggaa atgcgcgatc tggggcagga gcctaaatat attgttattg cgggcgtgtt
    28081 aagaaccgcg ctggcgaatc aacgcatcca acgtagcgcg ttagaaaaac aggctatgga
    28141 aaccgtgatt aacgctctgg cgcggtcata gccgctatca gggtggcaat aacgaaatcg
    28201 cctttgaatt gtcgcgattg tcaccatggc gggctggtta cccgccgtta gcgatgcgca
    28261 gggttatcag gtgatggcta agcgcagccc taatgtatca gggtacggct caaaataatt
    28321 ctggctgcgt agatagtcat ccggatgttc cgccagatag tgcttcagca gcgttaacgg
    28381 tgccaggata ggtagtcggc ccgcccggta gccgagaatc acctcgcgta attccgcgcg
    28441 ttgcctgctg ttcaacgcgc ggtgaaaata gccctggata tgcatcagca cattggtgtg
    28501 atttttacgt gaagcggggt gtcgcaggat agccatcagt ttttctctgt atcggacaaa
    28561 gaaggcatcc agatcgtccc actcatgcag acgcgcgacg aaagggccaa tttcgcggta
    28621 gccggcctgg tggtgggcga gaagctgaag tttgtatcgg ctatgaaacg cgagcaaact
    28681 gtgacgactc aagccctgcg cgcgtagcgc atttaattca tgtagcgcga agatacgtgc
    28741 gatgaaattc tcgcgtagta ccggatcgtg caggcgacca tcttcctcta tcggcagcca
    28801 gggatatttg tccatcatcg cggcggtaaa cagccccgtg ccagctttgc ggcccctgtt
    28861 acccttttca tcatacaggc gaacgcgctc cattccgcaa ctgggcgatt tcgcacacac
    28921 aataaacccc gccagttcgc ctattgttgg cagaaaccga tcggcaaagg cattcattcg
    28981 ctcggtgacg tcatcgtgcg gggcatggct atagcgcatc cgaatgtcgc cacaggtcgt
    29041 ctggataaga cgcagcgcag ggcggggcac gggcaggccg atcgccacct ccgggcagat
    29101 cggtttgtag gccacccacg gcgccagaga gttcatgaca aaatccatac gcttatgtcc
    29161 gccatcaaag cgtaccgcgg cgccagtcag acatccgcta atgccgacta cgggtttgtt
    29221 attcatgatt cccccttatt gaaagtacga cgactgacgc caacggcgca aaatgttatc
    29281 tcacgctgat ttaaaactta cacaactttg tttttttgtc taagttttcg cggagatttt
    29341 tttgatgtac ttaaatatca ataagataga atgaggggaa gaaatctatt tcagcgctta
    29401 tagtgtgata acctccagcg aagcgaccac gttgcgccac tgggcaagct gttttttctg
    29461 cccggcagtg agcttgccgg tggtcaccag gaaccatttt ctctgggcga acagctcggg
    29521 cgccagaacg gctggtggag agggaagcac attgagccgc agctcttgtc cggtacgagt
    29581 caacgcttcc agccagattt cacagtgatc cgagagatgc catccgctaa taaaagcatt
    29641 gttgccaggc gcttttctgt cgccttcaag gcaaaaagag gtgtaggcaa taatgatgcc
    29701 atccaatatt tcgcgcagcg tcatcacggc gggaagatgc gcggacactt tgctgcgcaa
    29761 cggacgcaat aaatgggtca ccagttctgc gcggggatat tcccggccac agtcataaat
    29821 caactgccgc agcgcgtcaa ttcgcccttc gtggagatgt tgaagcatcg tctcctgaat
    29881 cgttatccag ttatcgccca ggcgaatgac cggacgcgac agtaagggtt tgacctgact
    29941 tatcggtacg ccttttctca cccagtcgag gatgctaagc gcttgtcgaa tatcgtcatc
    30001 gctgtataag cgatgcccgc catcagtacg ctgcggtttc aataaaccat agcgtcgctg
    30061 ccatgccctt agcgtggcgg cattgatacc gcatagtctg gcaaattcgc cgatagaata
    30121 cgacatggta aagcccgtta aataagggga ttctactata tcatgattaa atgaagacta
    30181 aggtagtgat aaatggtgcg gcataccagg gcatccgtat ggattttgtc gatgatgagc
    30241 aatactgcgt ggcgtaaggc tcatcaaaat atgaccaatg cttaatacca tcggatgccc
    30301 ctggttaata ctctattaac ctcattcttc gggcgcagtt aagtaactct gtcactttat
    30361 gaacctgtag ctttctcatc atattcatcc gatgtgtttc gacggttttt atactgatat
    30421 gtagcttttc gctgatccca tgattggtat acccctcgtc aataagttta agaacctgac
    30481 gctcgcgcaa agtaagcagt tgatgattgg tcgtgtcagc gtttaattca gccaggatag
    30541 cttcccgatt caacgtcggg tcaatgtaac gcttgtttac tgcgactgtt tgcaatgccg
    30601 ctaacaggac ttgctgacta ctgcttttta aaacatagcc attagcacct gcggctaaag
    30661 ttttaatggt catatactct tgttggtatg ctgtgtaaac cagaatattc attgctggcc
    30721 aacgctgatg taattgagga atgatatcca ggccattgat gccaggtaag ctaagatcaa
    30781 ggataagtat gtcaggctcg tatgcgcaac aggcattata aacctcaaga ccatttttaa
    30841 catgctctac aattttaaaa tgaggccagg gtaataaggc attcataatg ccgttaatga
    30901 tgatttcatg atcgtctact aataagatct tatattcttt cattttgctg ccctcgcgaa
    30961 aattaagata atattaagta atggtgtagt ttttgaagat catacgtatt ttctggcgta
    31021 agtcggttag ttcttccagc gcgatgattt tccccatttt tacgcgattc tcaatgtcta
    31081 tgacatagca taccaattca gtctgcccta tttgacctaa acagcctttt aatgtgtgaa
    31141 ttaactgatc gatttttttt ccagccgata cggcattttc aatatcagcc agcaagaggt
    31201 ccagtgattg gaaaatcttg ctattaatga ccatatcatc tgtcgccagt agcgctgagc
    31261 agcgacttgg atcctgctcc tgtagctcta tatttcgtaa aagttggtat tctgcggcaa
    31321 tactgatata gcgagctaag gtagccaacg tcactggttt ggtaatgtaa tgatgaatcc
    31381 catttttttt acaacgatga atatcttctg tcgctacgct agcggatagc gccacaaaca
    31441 tgcagtcagg atctaaatta ttcggctcat cgtgccataa ttgtacacat tcaataccat
    31501 ctatttctgg cattctaatg tcaatcagta ctaaatcgaa tcgttgctgt tgtgataaag
    31561 tcagagcctc gttactactg gcggcaatag tgacgtgttg gcccaggctg acaagcattt
    31621 tgccgatgat atcccgatta atatcggcat catcaaccaa aagaatctgt aactgccagg
    31681 gtggtaacaa attatttatt attggtatat ttggtgtaca caatattaac tgttgcgcca
    31741 ggtcgtagag ttttccgggg aaatacaaaa gctcagcgtt gagaagcgca ttttgctggt
    31801 ggggtggttc gccgcgtatt ccccagcaag ccagttggcg atgcaggcag aacggcgctg
    31861 acagtgtccc tttaatttgt tgaggcggtt ggtattcttg taagggtaat actagcgaga
    31921 cacaggttcc aaccccgggg acacttttta gtgtcagatt accgcccatc attttagcca
    31981 ggcttgacgc aatagtcagt ccaattcctg taccttgcga atttgtgtct gcttgataaa
    32041 aagcagtaaa gatttgagac tgctgctgta tttcaatccc tttaccgcta tcgctaacca
    32101 gaaatattaa ttgttcctca tgacgcttga ccgtcagacg tatccctccg gtttcggtaa
    32161 attttaccgc gttcccgagt aaattaacca aaatttgccg taaacggata ctgtcggtat
    32221 gaaaatagag ggggacatgt tgaccaacaa aagtacgtaa tgacagtttt ttgctttgtg
    32281 ctggcccctg gatggtttgc attgcctggt ccagtaacgg cagtaacgct gtttcttcca
    32341 tatgtaatgt gaaatgacca gactcgatgc gtgaaaaatc cagcagatta ttaataatag
    32401 ctaacaaaga cagtgtgcaa tttctggcgg tatcagctaa tccttgctgc tctatgttta
    32461 aaggggtggt ttgtaataat tcaattgcac cgagtacgcc attcatcgga gtacgtaact
    32521 catgacttat taccgtaaga tgaatgcttt tacgtttgtt agcttgctca gcgcgttttt
    32581 ttgcttcatt tagcgcctgg gtgcgctctg cgactttgtt ttccagattg tcgtattgga
    32641 cttgtagggt atcaagtagt tggttaaaag caccggcaat actatctaat tcatccagtc
    32701 gttgtgctgg taaacgtgtg ctcagcggtg cagttgcggt tttattaatg atatcgacaa
    32761 aacgccataa cggtttggcc agtgagcgat gtagtaacca gcaaaaagcc gacgtcatca
    32821 acaccaatgc tgttaatgta aaggggattt gttggaggat agtttttaag atgcgattat
    32881 gtagattacc gtatgggtac agcgtaacca gactccatcc ggggccatgc aaagttgtgc
    32941 gtaatatcag aaatccggga atttgttgcc atccatcatg cagcgttaca ttttctaact
    33001 gtgtacgtat tttttgcggg atgtatgaaa acggcaataa gtggttgttt tgatccagcc
    33061 atactcgaat actatcatct aatggtaggt ggctcttaga aatgagatca ggaagtttaa
    33121 ccatcacccc aaaaaatacg ccttgctgat cggcaaccgc aacggaagcg tgccatcctt
    33181 tgccgtttat gtattctggt tcactccagt aaaacccggc atgggttggg tataaaggaa
    33241 agctttttcg cgttaaaagc tgtagagttg aataatctga agggttatca gtagataata
    33301 acgaaatctc atttttatgg ttaagaataa aactatcgcg acgaaagctt ttttcatcga
    33361 tatcagagga ctgcagaaag agacgatgct tctctccgtt tagcgtcggc gtgcaatttg
    33421 aaggaccgac agaaagatgc cggctcacct cagggaaaat atcattatga tgaatctcag
    33481 tcgctaatga gcattgatac attaaatttt tagcgtcacg ttcagcctct tcaaatcgtt
    33541 gattgcttag tacaatattc atctcggata gagcggataa atcctctatt atatgctgcc
    33601 gtttctgaac cattgatata taagctgcag taatcacaga tagcagccaa ataattatgg
    33661 ttgttaataa aaataaaaaa gttagcctga ttactaaaga tgtttgcagc gtattcttga
    33721 gattgagcaa attcataatg ctttcctcca gttgcctgtt gcaaaatctt tggcacttga
    33781 tcactatcgc agtacatata gtttcatcag aagattaatc gatggtgtta tcattaggaa
    33841 gataaatttc ttcatatata aaccagtcga tgactacaat tactttttaa taaggcagcg
    33901 atgtaaaaac atcgtaacag tttatttaat aaataatttt tcaaattgta agtttttgtg
    33961 tctatgctga aaatgtaatt gtgaatttat cggaaaatcc gaatgataga atcgcctgtg
    34021 acaaggtata tgtagacagc atcctgatat tgtacaagaa gagtatagtc gaaataaatg
    34081 tgaatcaggc tttttacgga tgtggttgtg agcgaatttg atagaaactc ccatttatgt
    34141 ctgaggaggg attcatgctg gcagttttaa aaggcattcc attaattcag gatatcaggg
    34201 ccgaaggtaa tagccgatcc tggataatga ctattgatgg gcatcctgcc agaggagaaa
    34261 ttttctcaga agcattttct atttctttgt tcttaaatga cctggaaagc ttacctaagc
    34321 cttgtcttgc ctatgtgaca ctactgcttg cagcacaccc ggacgtccat gactatgcta
    34381 tacagctcac agcggatggg ggatggttaa acggttatta taccacaagt agtagctctg
    34441 agcttattgc tattgagata gaaaaacacc tggctttaac ttgcatttta aaaaatgtaa
    34501 tacgcaatca ccataaactt tattcgggtg gggtataaaa tggtagtaaa taaacgttta
    34561 atcttaattt tactatttat actcaataca gcaaagagtg atgagttatc atggaaaggt
    34621 aatgacttca ccctttatgc cagacaaatg ccattagcag aggttttaca tctgctctca
    34681 gagaactatg atacggctat tactattagc ccattgataa cagctacatt tagtggaaaa
    34741 attccgcctg gaccaccggt cgatattttg aataacctgg cagcacaata tgatttgcta
    34801 acctggtttg atggcagcat gttatatgta tatcctgcat cgttattaaa acatcaggtt
    34861 atcactttca atattttatc tactggacgg ttcattcatt acttacgcag ccagaatatc
    34921 ctttcatcac cgggatgcga ggttaaagaa attaccggta ccagagctgt ggaggtgagt
    34981 ggtgttccca gctgtctgac tcgtattagt caattagctt cagtgctgga taatgcgtta
    35041 atcaaacgaa aagacagtgc ggtgagtgta agtatataca cgcttaagta tgccactgcg
    35101 atggataccc aataccaata tcgcgatcag tccgtcgtgg ttccaggggt cgtgagtgta
    35161 ttgcgtgaga tgagtaaaac cagcgtaccg gcgtcatcga cgaccaatgg ttcacccgct
    35221 acacaggcat tgcccatgtt tgctgccgac ccacgccaga atgcagtgat cgttcgtgat
    35281 tatgcggcca atatggccgg gtatcggaaa ctcatcacag aattagatca acgccagcag
    35341 atgatagaga tttcggtgaa aattatcgat gttaatgctg gagatattaa ccagttaggc
    35401 atcgactggg gaacggcagt gtcgctgggt ggcaagaaaa ttgcgttcaa tacaggtttg
    35461 aatgacggtg gtgctagcgg tttttcaacg gtaatcagcg atacctcaaa ctttatggtg
    35521 cgtttgaatg ccctggaaaa aagctctcag gcttatgtac tttcccagcc atctgtggtg
    35581 actttaaata atatccaggc tgtgctggat aaaaatatta ctttctatac caaactgcag
    35641 ggagaaaaag tggctaaact tgaatccatc actacgggtt ctttgttgcg cgttacacct
    35701 cgcttgttaa atgacaatgg cacgcaaaaa ataatgctta atcttaatat tcaggatgga
    35761 caacaaagtg atacgcaaag cgaaacagat ccgctacccg aagtgcaaaa ttctgaaatt
    35821 gcttcgcaag ccacattatt ggccggacaa agtctattgc tgggagggtt taaacaaggt
    35881 aaacaaatcc actcgcaaaa caaaatccct ttattgggcg atatccctgt cgtaggtcat
    35941 ttgtttcgca atgatacgac tcaagtacat agtgtaatca ggcttttttt gattaaagcc
    36001 tcagtagtaa ataatggcat atctcatggt taatccaaag agttcctgga aaatacgttt
    36061 tttaggtcac gttttacaag gccgggaagt atggctgaat gaaggtaacc tgtcactggg
    36121 ggagaaggga tgcgatattt gtattccgct ggctataaat gaaaaaatta ttctgagaga
    36181 acaggcagat agtttatttg ttgatgccgg gaaagccaga gttagagtta atggccgcag
    36241 atttaatcca aataagccgc taccatccag tggggttttg caggttgcgg gagtggctat
    36301 cgcgtttggt aaacaggatt gtgaacttgc tgattatcaa atacccgttt ccagatcagg
    36361 gtactggtgg ttggctggcg tattcttgat tttcatcggt ggaatgggtg tcctgttaag
    36421 tattagtggt cagcctgaaa cggtaaatga cttacctttg cgggttaagt ttttattaga
    36481 caaaagcaat attcattatg tgcgggcgca atggaaagaa gatggaagcc tgcagttgtc
    36541 cggttattgc tcgtcaagcg aacagatgca aaaggtgaga gcgactctcg aatcatgggg
    36601 ggtcatgtat cgggatggtg taatctgtga tgacttattg atacgagaag tgcaggatgt
    36661 tttgataaaa atgggttacc cgcatgctga agtatccagc gaagggccgg ggagcgtgtt
    36721 aattcatgat gatatacaaa tggatcagca atggcgtaag gttcaaccat tacttgcaga
    36781 tattcccggg ttattgcact ggcagattag tcattctcat cagtctcagg gggatgatat
    36841 tatttctgcg ataatagaga acggtttagt ggggcttgtc aatgttacgc caatgcggcg
    36901 ctcttttgtt atcagtggtg tactggatga atctcatcaa cgcattttgc aagaaacgtt
    36961 agcagcatta aagaaaaagg accccgctct ttctttaatt tatcaggata ttgcgccttc
    37021 tcatgatgaa agcaagtatc tgcctgcgcc agtggctggc tttgtacaga gtcgccatgg
    37081 taattactta ttactgacga ataaagagcg tttacgtgta ggggcattgt tacccaatgg
    37141 gggagaaatt gtccatctga gtgccgatgt ggtaacgatt aaacataatg atactttgat
    37201 taactatcca ttagatttta agtgagtgga aaatgacaac tctgacccgg ttagaagatt
    37261 tgctgcttca ttcgcgtgaa gaggccaaag gcataatttt acaattaagg gctgcccgga
    37321 aacagttaga agagaacaac ggtaggttac aggatccgca gcaatatcag caaaacacct
    37381 tattgcttga agcgatcgag caggccgaaa atatcatcaa cattatttat tatcgttacc
    37441 ataacagcgc acttgtagtg agtgagcaag agtaaagtaa aaatatctta gagcctatcc
    37501 caccaggcgt taattggcgc agccagtttg gacacggata gcgcgcaaaa accggagcgt
    37561 acacgtagta cgtgaggatt ttgagcactg cccaggttca aaatggcaag taaaatagcc
    37621 ctaatgggac aggctcttag ttagcacgtt aattatctat cgtgtatatg gaggggaatg
    37681 atgataaaga aaaaggctgc gtttagtgaa tatcgtgatt tagagcaaag ttacatgcag
    37741 ctaaatcact gtcttaaaaa atttcaccaa atccgggcta aggtgagtca acagcttgct
    37801 gaaagggcag agagccccaa aaagagcaga gagacagaga gtattcttca taacctattt
    37861 ccacaaggcg ttgccggggt taaccaggag gccgagaagg atttaaagaa aatagtaagt
    37921 ttgtttaaac aacttgaagt acgactgaaa caacttaatg ctcaagcccc ggtggagata
    37981 ccgtcaggaa aaacaaaaag gtaaagcata atgtcttcag gaaacatctt atggggaagt
    38041 caaaacccta ttgtgtttaa aaatagcttc ggcgtcagca acgctgatac cgggagccag
    38101 gatgacttat cccagcaaaa tccgtttgcc gaagggtatg gtgttttgct tattctcctt
    38161 atggttattc aggctatcgc aaataataaa tttattgaag tccagaagaa cgctgaacgt
    38221 gccagaaata cccaggaaaa gtcaaatgag atggatgagg tgattgctaa agcagccaaa
    38281 ggggatgcta aaaccaaaga ggaggtgcct gaggatgtaa ttaaatacat gcgtgataat
    38341 ggtattctca tcgatggtat gaccattgat gattatatgg ctaaatatgg cgatcatggg
    38401 aagctggata aaggtggcct acaggcgatc aaagcggctt tggataatga cgccaaccgg
    38461 aataccgatc ttatgagtca agggcagata acaattcaaa aaatgtctca ggagcttaac
    38521 gctgtcctta cccaactgac ggggcttatc agtaagtggg gggaaatttc cagtatgata
    38581 gcgcagaaaa cgtattcatg aaaaaagacc cgaccctaca acaggcacat gacacgatgc
    38641 gatttttccg gcgtggcggc tcgctgcgta tgttgttgga tgacgatgtt acacagccgc
    38701 ttaatactgt gtatcgctat gccatgcagc ttatggaggt aaaagaattc gccggcgcag
    38761 cgcgactttt tcaattgctg acgatatatg atgcctggtc atttgactac tggtttcggt
    38821 taggggaatg ctgccaggct caaaaacatt ggggggaagc gatatacgct tatggacgcg
    38881 cggcacaaat taagattgat gcgccgcagg cgccatgggc cgcagcggaa tgctatctcg
    38941 cgtgtgataa cgtctgttat gcaataaaag cgttaaaagc cgtggtgcgt atttgcggcg
    39001 aggtcagtga acatcaaatc ctccgactac gtgcagaaaa gatgttacag cagctttctg
    39061 acaggagcta aaaatgaatc gaattcacag taatagcgat agcgccgcag gagtaaccgc
    39121 cttaacacat catcacttaa gcaatgtcag ttgcgtttcc tcgggttcgc tgggaaagcg
    39181 ccagcatcgt gtgaattcta cttttggcga tggcaacgcc gcgtgtctgc tatccgggaa
    39241 aattagtctt caggaggcaa gcaatgcgtt gaagcaactg cttgatgccg tacccggaaa
    39301 tcataagcgt ccatcattgc ctgacttttt gcagaccaat cccgcggttt tatcaatgat
    39361 gatgacgtca ttaatactca acgtctttgg taataacgct caatcgttat gccaacagct
    39421 tgagcgggca actgaggtgc aaaatgcatt acgtaataag caggtaaagg agtatcagga
    39481 gcagatccag aaagcgatag agcaggagga taaagcgcgt aaagcgggta tttttggcgc
    39541 tatttttgac tggattaccg gcatatttga aaccgtgatt ggcgccttaa aagttgtgga
    39601 aggttttctg tccggtaatc ccgcagaaat ggctagcggc gtagcttata tggccgcagg
    39661 ttgtgcagga atggttaaag ccggagccga aacggcaatg atgtgcggtg ctgaccacga
    39721 tacctgtcag gcgattattg acgtgacaag taagattcaa tttggttgtg aagccgtcgc
    39781 gctggcactg gatgttttcc agattggccg tgcttttatg gcgacgagag gtttatctgg
    39841 cgcagctgca aaagtgcttg actccggttt tggcgaggaa atggttgagc gtatggttgg
    39901 tgcaggggaa gcagaaatag aggcgttggc tgaaaagttt ggcgaagaag tgagcgaaag
    39961 tttttccaaa caatttgagc cgcttgaacg tgaaatggtt tcgccgggcg agatggaaga
    40021 ggagtctgcc gaattttctc gtaacgtaga aaaaaatatg acaaaaaatg cgggaaaaag
    40081 ttttacgaaa gagggggtga aagccatggc aaaagaagcg gtaaaagaag ccctggaaaa
    40141 atatgcgcaa gaaggggaaa agtttctgtt aaaaaatttt cgtaataaag ttctcttcaa
    40201 tatgttcaaa aaaatcctgt atgccttact gagggattgt tcatttaaag gcttacaggc
    40261 tatcagatgt gcaaccgagg gtgccaatca gatgaatact ggcatggtta acacagaaaa
    40321 agcgaagctt gaaaagaaaa tagagcaatt aataactcag caacggtttc tggatttcat
    40381 aatgcaacaa acggatgacc aaaaaaagat agaacaaaaa cgcttagagg ggctttataa
    40441 aggtagcggt gccgcgctta gaggtgtatt agataccatt gatcactata gtagcgttca
    40501 ggcgagaata gctggctggc gcgcttaatc tgaggataaa aatatggaag cgagtaacgt
    40561 agcactggta ttaccagcgc cttccttgtt aacgccttct tccactccat ctccctccgg
    40621 ggagggaatg ggtactgaat caatgcttct gttatttgat gatatctgga tgaagctaat
    40681 ggagcttgcc aaaaagctgc gcgatatcat gcgcagctat aacgtagaaa aacaacgact
    40741 gtcctgggaa ctgcaagtca atgttttgca gacgcaaatg aaaacaattg atgaagcgtt
    40801 tagagcatca atgattactg cgggtggcgc catgttgtcg ggagtgctga cgataggatt
    40861 aggggctgta ggcggggaaa ccggtcttat agcgggtcaa gccgtaggac acaccgctgg
    40921 gggagtcatg ggcctggggt ccggtgtagc gcaacgtcaa agtgatcaag ataaagcgat
    40981 tgccgacctg caacaaaatg gggcacaatc ttataataaa tccctgacgg acattatgga
    41041 gaaagcaact gaaattatgc agcaaatcat cggcgtgggg tcgtcactgg ttacggttct
    41101 tgctgaaata ctccgggcat taacgaggta aatatggtgc aagaaataga gcaatggttg
    41161 cgtcggcatc aggtgtttac tgagcctgca tatttagggg agaccgccat attacttggg
    41221 cagcagttta tattatcgcc ttacctggtg atctatcgta ttgaggcaaa agaaatgatt
    41281 atttgtgagt tcaggcgcct gacgcccggg caacctcgac cacagcaatt gtttcactta
    41341 ctgggacttt tacgcgggat atttgtgcat cacccgcagt taacatgttt aaagatgttg
    41401 ataatcaccg acgttctgga tgaaaaaaaa gctatgctac gcaggaaatt attgcgcatc
    41461 ctgacagtaa tgggagcgac ctttacacag cttgatggcg ataactggac aattttatcc
    41521 gccgagcatc ttatccagcg acgtttttaa atgaccttcc tggcgtaaat cattatcacg
    41581 tgaaaataac aatcaatagg tatgatgatg aaagaagatc agaaaaataa aatacccgaa
    41641 gacattctga aacagctatt atccgttgat ccggaaaccg tttatgccag tggttacgcc
    41701 tcatggcagg agggggatta ttcgcgcgcc gtaatcgatt ttagctggct ggtgatggcc
    41761 cagccatgga gttggcgtgc ccatattgca ttggctggca cctggatgat gcttaaagaa
    41821 tacacgacgg ccattaattt ctatggacat gccttgatgc tggatgccag ccatccagaa
    41881 ccggtttacc aaacgggcgt ctgtctcaaa atgatggggg aacccgggtt ggcgagagag
    41941 gcttttcaaa ccgcaatcaa gatgagctat gcggatgcct catggagtga gattcgccag
    42001 aatgcgcaaa aaatggttga tactcttatt gcttaaataa cagaacgaaa tatgaaaatt
    42061 catattccgt cagcggcaag caatatagtc gatggtaata gtcctccttc cggtatacaa
    42121 gcgaaggagg catcgtttcc tccccctgaa attccagccc ctggcacccc tacagttcct
    42181 gtggtgctta cgcctgaaca aataaggcag cagagggatt atgctataca ttttatgcaa
    42241 tacacgattc gtgcgctggg ggcgacagtc gtgtttggat tatcggttgc tgcagcggta
    42301 atttctggcg gagcaggatt acccattgct attcttgcgg gggcggcgct cgtgattgct
    42361 attggggatg cttgctgtgc gtatcataat tatcaattga tatgtcagca aaaggcgccg
    42421 ttacaaaccg ccagtgatag cgttgctctt gtggtcagtg cgctggcctt aaaatgcggg
    42481 gcaagtctta actgcgctaa cacccttgct aattgtcttt ctttattaat acgttcagga
    42541 atcgctattt ctatgttggt tttaccccta cagtttccac tgcccgcggc tgaaaatata
    42601 gcggcctctt tggacatggg gagtgtaatt acctccgtta gcctgacggc gataggtgcg
    42661 gtactggatt attgccttgc ccgcccctct ggcgacgatc aggaaaattc tgttgatgaa
    42721 cttcatgccg atcccagtgt gttattggcg gaacaaatgg cattgctctg tcaatctgct
    42781 actacacctg cattaatgga cagttctggt catacatctc ggggagaacc atgaaacctg
    42841 ttagcccaaa tgctcaggtc ggagggcaac gtcctgttaa cgcgcctgag gaatcacctc
    42901 catgtccctc attgccacat ccggaaacca atatggagag tggtagaatt ggacctcaac
    42961 aaggaaaaga gcggttattg gccggacttg cgaaacgagt gatagagtgt tttccaaaag
    43021 aaatttttag ttggcaaacg gtcattttgg gcggacagat tttatgctgt tccgctggaa
    43081 tagcattaac agtgctaagt ggtggaggcg caccgctcgt agccctggca ggaattggcc
    43141 ttgctattgc catcgcggat gtcgcctgtc ttatctacca tcataaacat catttgccta
    43201 tggctcacga cagtataggc aatgccgttt tttatattgc taattgtttc gccaatcaac
    43261 gcaaaagtat ggcgattgct aaagccgtct ccctgggcgg tagattagcc ttaaccgcga
    43321 cggtagtgac gcattcatac tggagtggga gtttgggact acagcctcac ttattagagc
    43381 atcttaatga tcttacctac ggactaatga gttttactcg cttcggtatg gatgggatgg
    43441 caatgaccgg tatgcaggtc agcagcccat tatatcgttt gctggctcag gtgacgccag
    43501 aacaacgtgc gccggagtaa tcgttttcag gtatataccg gatgttcatt gctttctaaa
    43561 ttttgctatg ttgccagtat ccttacgatg tatttatttt aaggaaaagc attatggata
    43621 ttgcacaatt agtggatatg ctctcccaca tggcgcacca ggcaggccag gccattaatg
    43681 acaaaatgaa tggtaatgat ttgctcaacc cagaatcgat gattaaagcg caatttgcct
    43741 tacagcagta ttctacattt attaattacg aaagttcact gatcaaaatg atcaaggata
    43801 tgcttagtgg aatcattgct aaaatctgaa gttattagcg acgatgttcg acggttgctg
    43861 ctggaaatca tgtttgcggg cgttaaccat agcctgattt cccaggtaca tgcgatgtta
    43921 ccagcgctaa cggttattgt tccggataaa aaattacagt tggtatgttt ggcattattg
    43981 ttggcgggtt taaatgagcc gttaaaggcc gcgaaaattt tatcggatat tgatttgcca
    44041 gaggctatgg cgctacgaat gttatttcct gcaccaaatg aggggtttga aaattgaata
    44101 tttctgatat gagcatagtg cctgtaagca ctcaatctta tgtaaagtcc tttgcagaac
    44161 cgagccagga gcaaattaat ttttttaaac aattgctgaa agatgaagca tccaccagta
    44221 acgccagtgc tttattaccg caggttatgt tgaccagaca aatggattat atgcagttaa
    44281 cggtaggcgt cgattatctt gccagaatat caggcgcagc atcgcaagcg cttaataagc
    44341 tggatagcat gacatgaagg ttcatcgtat aatatttctt actgtcctta cgttctttct
    44401 tacggcatgt gatgtggatc tttatcgctc attgccagaa gatgaggcga atcaaatgct
    44461 ggcattactt atgcagcatc atatcgatgc ggaaaaaaaa caggaagagg acggtgttac
    44521 cttacgtgtc gagcagtcgc agtttattaa tgcggttgag ctacttagac ttaacggtta
    44581 tccgcatcgg cagtttacaa cggcggataa gatgtttccg gctaatcagt tagtggtatc
    44641 accccaggaa gaacagcaga agattaattt tttaaaagaa caaagaattg aaggaatgct
    44701 gagtcagatg gagggcgtga ttaatgcaaa agtgaccatt gcgctaccga cttatgatga
    44761 gggaagtaac gcttctccga gctcagttgc cgtatttata aaatattcac ctcaggtcaa
    44821 catggaggcc tttcgggtaa aaattaagga tttaatagag atgtcaatcc ctgggttgca
    44881 atacagtaag attagtatct tgatgcagcc tgctgaattc agaatggtac ctgacgtacc
    44941 cgcgagacaa acattctgga ttatggacgt tatcaacgcc aataaaggga aggtggtgaa
    45001 gtggttgatg aaataccctt atcagttgat gttatcgttg acaggactgt tattaggagt
    45061 gggcatcctg atcggctatt tttgcctgag acgccgtttt tgagccgacc tgatcccgaa
    45121 gtgttgcaac tttatcgtta tttctggcaa cctgctcgtt acgctgtacc ggaatggctg
    45181 gataagctgg gctttcatct ttcaaactgc tggcgttatg gcgatcggcc caaattggat
    45241 cgtcttcttg acagagcgtt aaatagacta aggggaagct ctgttattcc agcctgttta
    45301 aatgacaggc aaaaacgaca gattcgtctt gcgccgcgta tatcggcatt tgcctttgga
    45361 ctgggattat tcaaactcag gtgtagtgac tattttatgc taccagagta tcggcaattg
    45421 cttctacagt ggtttagcga ggatgagatc tggcagctat atggttggtt ggggcaaaga
    45481 gatggcaaat tacttcctcc gcaagtgatg caacaaactg cattgcagat cggtaccgcc
    45541 attcttaatc gggaagcgca tgacgatgcg gttttacatg cgctattagt attattaccc
    45601 cctccgcagc gtatactttg gccgaagact tctcttaccg agattatctt catggagcat
    45661 ttgctatgag ttttacttca cttcctctga cggaaattaa ccataagcta cccgctcgaa
    45721 atattattga gtcacagtgg ataacattac aattaacttt atttgcacaa gagcaacaag
    45781 ctaagagagt ttcacatgct attgtgagct ccgcttaccg taaggctgaa aaaatcatcc
    45841 gagacgccta tcgttatcag cgtgaacaga aagttgagca gcaacaagaa atagcgtggt
    45901 tgcgtaaaaa tacgctggaa aaaatggaag tagaatggct ggaacaacat gtaaaacatt
    45961 tacaagaaga tgaaaatcaa tttcgttcat tggtcgatca cgccgcgcat catattaaaa
    46021 atagtataga acaggttctg ttggcctggt tcgaccaaca gtcggtagac agtgttatgt
    46081 gccatcgtct ggcacgccag gccacggcta tggcggaaga gggagcgctt tatttgcgta
    46141 ttcatcctga aaaagaggca ttgatgcgtg aaacttttgg caagcggttt acgctgatta
    46201 tcgagcctgg tttctctccc gatcaggctg aactttcctc aacacgatat gccgttgagt
    46261 tttcactttc tcgtcatttc aacgcgttac tgaaatggtt acgtaatggt gaagataaaa
    46321 gaggtagcga tgaatattaa aattaatgag ataaaaatga cgccccctac agcatttacc
    46381 cctggcctgg ttatagagga acaagaggtt atttcgcctt caatgttagc tctccatgag
    46441 ttacaggaaa cggcgggggc agcgctctat gagacgatgg aagaaatagg aatggcgctg
    46501 agtggtaaac tgcgcgaaag taataaattc actgatgctg agaaactgga gcgcaggcag
    46561 caggctttgc tgcgtttgat aaaacaaata caggaggata atggggcagc gttgcgtccg
    46621 cttaccgaag agaatagtga tcctgattta cagaatgcgt atcaaattat cgctcttgca
    46681 atggcgctta ctgccggcgg gttgtcaaaa aagaaaaaac gcgatttgca atcgcaactg
    46741 gatacgctta cagcggagga gggatgggaa cttgccgttt ttagtttact ggaacttggc
    46801 gaagtggata ccgctacgct gtcctcgctg aagcgtttta tgcaacaggc gatagacaac
    46861 gatgaaatgc ccttatcgca gtggttcaga cgcgtggcag actggccgga tcgcggtgaa
    46921 cgggtccgta ttttgctaag agcaatagcc tttgaactta gcatatgcat cgaaccctcg
    46981 gagcaaagtc gtttggccgc agcattagta cgcttgcgtc gtttgttgtt attccttggc
    47041 cttgaaaaag agtgccagcg tgaggagtgg atttgccagt tgccgcctaa tacattactg
    47101 ccgctactac tcgatatcat ttgtgagcgc tggcttttca gcgattggtt gcttgataga
    47161 cttaccgcta tagtttcttc atcgaagatg ttcaatcggt tactccaaca acttgatgcg
    47221 cagtttatgc tgatacccga taactgtttt aacgacgaag atcaacgtga acaaattctc
    47281 gaaacgcttc gtgaagtaaa gataaatcag gttttattct gatacctggc tttcaatatt
    47341 taggtaaatt ggctttctgg ctcatcatga ggcgtcagga tggattggga tctcattact
    47401 gaacgtaata ttcagctttt tattcaatta gcaggattag ctgaacggcc tttagcaacc
    47461 aatatgttct ggcggcaagg acaatatgaa acctgtctaa actatcataa tggtcgtatt
    47521 cacttatgtc agatactcaa gcaaaccttc ttagacgaag aactgctttt taaagcgttg
    47581 gctaactgga aacccgcagc gttccagggt attcctcaac gattattttt gttgcgcgat
    47641 gggcttgcaa tgagttgttc tccacctctt tccagctccg ccgagctctg gttacgatta
    47701 catcatcgac aaataaaatt tctggagtcg caatgcgttc atggttaggt gagggaatca
    47761 gggcgcaaca gtggctcagt gtatgcgcgg gtcgtcagga tatggttctg gcgacggtgt
    47821 tattaatcgc tatcgtgatg atgctgttac ctttgccgac ctggatggtt gatatcctga
    47881 ttactatcaa ccttatgttt tcagtgatcc tgcttttaat tgttatttat cttagtgacc
    47941 ctctcgattt atcggtattt ccgtctttat tacttattac tacattatat cgtttgtcac
    48001 tcacaatcag cacatcacgg ctggtactgt tacaacataa tgccggtaat attgtggatg
    48061 ctttcggtaa gtttgtcgta ggaggaaatc tcaccgttgg gttggtcgta tttaccatca
    48121 ttactattgt gcaatttatt gtcattacaa aaggtatcga gagggtggcg gaagttagcg
    48181 cacgtttctc gcttgatggg atgccaggca aacaaatgag tatcgatggc gatttgcgtg
    48241 ccggagttat cgatgcagac catgcccgta cattaagaca gcacgtccag caggaaagcc
    48301 gttttctcgg tgcgatggac ggtgcaatga aatttgttaa aggcgatacg attgccggta
    48361 ttattgttgt tctggtgaac attatcggcg gtattattat cgctatcgta caatatgata
    48421 tgtcgatgag tgaggctgtt cacacttata gcgtactgtc aatcggagat ggtttatgtg
    48481 ggcaaattcc atcgctgctg atttccctta gcgcgggaat tattgtcacc cgtgttccgg
    48541 gtgagaaacg ccagaacctg gcgacagagt tgagttctca aattgccaga caacctcagt
    48601 cgctcatatt aaccgctgtg gttttaatgc tcctcgcttt aattcctggc tttcctttta
    48661 tcactctcgc tttcttttca gcgttgttag cattgccaat tatcctcatt cgccgcaaaa
    48721 agtctgtggt ttccgcaaat ggcatcgaag cgccggaaaa agatagtatg gttcccggcg
    48781 catgtcctct aatcttacgt cttaccccga cgttacattc tgccgacctg attcgtgata
    48841 ttgatgccat gagatggttt ttatttgagg ataccggcgt ccctctccct gaggtgaata
    48901 ttgaggtttt gcctgaaccc accgaaaaat tgacggtact gctatatcag gaacccgtgt
    48961 ttagtttatc tattcccgcc caggcggatt atttattgat aggcgcggac gctagtgtgg
    49021 tgggtgacag ccagacgtta ccgaacggaa tggggcagat ctgttggctt tcaaaagaca
    49081 tggctcataa ggcgcaaggt tttggactgg acgttttcgc gggcagccaa cgtatctctg
    49141 ccttattaaa atgtgtcctg cttcggcata tgggagagtt tattggtgtt caggaaacgc
    49201 gttatctaat gaatgcgatg gaaaaaaact actctgaact ggtgaaagaa cttcagcgcc
    49261 agttacccat taataaaatc gctgaaactt tgcaacggct tgtatcagag cgggtttcta
    49321 ttagagattt acgtcttatt tttggcacat taattgactg ggcgccacgc gaaaaagatg
    49381 tcctgatgtt gacagaatat gtccgtatcg cgcttcgccg tcatattctg cgtcgtctta
    49441 atccggaagg aaaaccgctg ccgattttgc ggatcggcga aggtattgaa aacctcgtgc
    49501 gtgaatccat tcgccagacg gcaatgggga cctatactgc gctgtcgtct cgtcataaga
    49561 cgcagatcct gcaacttatt gagcaggcgc tgaagcagtc agccaaatta ttcattgtca
    49621 cttctgtcga cacccgccgt ttcttgcgaa aaattacaga agccaccttg ttcgacgtac
    49681 cgattttgtc atggcaggaa ttaggagagg agagccttat acaagtggta gaaagtattg
    49741 accttagcga agaggagttg gcggacaatg aagaatgaat tgatgcaacg tctgaggctg
    49801 aaatatccgc cccccgatgg ttattgtcga tggggccgaa ttcaagatgt cagcgcaacg
    49861 ttgttaaatg cgtggttgcc tggggtattt atgggagagt tgtgctgtat aaagcctgga
    49921 gaagaacttg ctgaagtcgt ggggattaat ggcagcaaag ctttgctatc tccttttacg
    49981 agtactatcg ggcttcactg cgggcagcaa gtgatggcct taaggcgacg ccatcaggtt
    50041 cccgtgggcg aagcgttatt agggcgagtc attgatggtt ttggtcgtcc ccttgatggc
    50101 tgcgaactgc ccgacgtctg ctggaaagac tatgatgcaa tgcctcctcc cgcaatggtt
    50161 cgacagccta tcactcaacc attaatgacg gggattcgcg ctattgatag cgttgcgacc
    50221 tgtggtgaag ggcaacgagt gggtattttt tctgctcctg gcgtggggaa aagcacgctt
    50281 ctggcgatgc tgtgtaatgc gccagacgca gactgcaatg ttctggtgtt aattggtgaa
    50341 cgtggacgag aagtccgcga gttcatcgat tttacactgt ctgaagagac ccgaaaacgt
    50401 tgtgtcattg ttgtcgcaac ctctgacaga cccgccttag agcgcgtgag ggcgctgttt
    50461 gtggccacca cgatagcaga attttttcgc gataatggaa aacgagtcgt cttgcttgcc
    50521 gactcactga cgcgttatgc cagggccgca cgggaaatcg ctctggccgc cggagagacc
    50581 gcagtttctg gagaatatcc gccaggcgta tttagtgcat tgccacgact tttagaacgt
    50641 acaggaatgg gggaaaaagg cagtattacc gcattttata cggtcctggt ggaaggcgat
    50701 gatatgaatg agccgttggc ggatgaagtc cgttcactgc ttgacggaca tattgtgcta
    50761 tcccggcggc ttgcagagag ggggcattat cctgccattg acgtgttggc aacgctcagc
    50821 cgcgtttttc cagtcgttac cagccatgag catcgtcaac tggcggctat attgcgacgg
    50881 cgcctggcgc tttaccagga ggttgaactg ttaatacgca ttggggaata ccagcgagga
    50941 gttgatactg ataccgataa agccattgat acctatccgg atatttgcac atttttgcga
    51001 caaagtaagg atgaagtatg cggacccgag ctactcatag aaaaattaca tcaaatactc
    51061 accgagtgat catggaaact ttgctggaga taatcgcgcg gcgtgaaaag caattacgca
    51121 gcaaacttac cgtgcttgat cagcagcaac aggcgattat tactgaacag cagatttgcc
    51181 agacgcgcgc tttagcagtg actaccagac tgaaagaatt aatgggctgg caaggtacgt
    51241 tatcttgtca tttattgttg gataagaaac aacaaatggc cggactattc actcaggcgc
    51301 agagcttttt gacgcaacgg cagcagttag agaatcagta tcagcagctt gtctccaggc
    51361 gaagcgaatt acagaagaat tttaatgcgc ttatgaaaaa gaaagaaaaa attactatgg
    51421 tattaagcga tgcgtattac caaagttgag ggaagtcttg ggttgccatg ccagtcttat
    51481 caggatgata acgaggcgga ggtggaacgt atggactttg aacaactcat gcaccaggca
    51541 ttacccattg gtgagaataa tcctcctgca gcattgaata agaacgtggt tttcacgcaa
    51601 cgttatcgtg ttagtggcgg ttatcttgac ggtgtagagt gtgaagtctg tgagtcagga
    51661 gggctaatcc agttaagaat caatgtccct catcatgaaa tttaccgttc gatgaaagcg
    51721 ctaaagcagt ggctggagtc tcagttgctg catatggggt atataatttc cctggagata
    51781 ttctatgtta agaatagcga atgaagagcg tccgtgggtg gagatacttc caacacaagg
    51841 cgctactatt ggtgagctga cattgagtat gcaacaatat ccagtacagc aagggacatt
    51901 atttaccata aattatcata atgagctggg tagggtgtgg attgcagaac aatgctggca
    51961 gcgctggtgt gaagggctaa ttggcaccgc taatcgatcg gctattgagc ctgaattgct
    52021 atatggaata gctgaatggg ggctggcgcc gttattgcaa gccagtgatg caaccctctg
    52081 tcagaacgag ccgccaacat cctgcagtaa tctaccacat cagctagcgt tgcatattaa
    52141 atggacagtt gaagaacatg agttccatag cattattttt acatggccaa cgggtttttt
    52201 gcgcaatata gtcggagagc tttctgctga gcgtcaacag atttatcctg ctcctcctgt
    52261 ggtagtccct gtatatttag gctggtgtca gcttacatta attgaacttg agtctatcga
    52321 aatcggcatg ggcgttcgga ttcattgctt tggcgacatc agactcggtt tttttgctat
    52381 tcaactacct gggggtattt acgcgagggt gttgctgaca gaggataaca cgatgaaatt
    52441 tgacgaatta gtccaggata tcgaaacgct acttgcgtca gggagcccga tgttaaagag
    52501 tgatggaacg tcttcagtcg aacttgagca gataccacaa caggtgctct ttgagattgg
    52561 acgtgcgagt ctggaaattg gacaattacg acaacttaaa acgggggacg ttttgcctgt
    52621 aggcggatgt tttgcgccag aagtgacgat aagagtaaat gaccgtatta ttgggcaagg
    52681 tgagttgatt gcctgtggga atgaattcat ggtacgtatt acacgttggt atctttgcaa
    52741 aaatacagcg taaacctgat aagaaaaata atatgcgaac aatataatag cgttccaggt
    52801 cgtgtcatga gagatacagt atgtctttac ccgattcgcc tttgcaactg attggtatat
    52861 tgtttctgct ttcaatactg cctctcatta tcgtcatggg aacctctttc cttaaactgg
    52921 cggtggtatt ttcgatttta cgaaatgctc tgggtattca acaagttcct ccaaatatcg
    52981 cactgtatgg cttcgcgctt gtactttcct tattcattat ggggccgacg ctattagctg
    53041 taaaagagcg ctggcatccg gttcaggtcg ctggcgctcc tttctggacg tctgagtggg
    53101 acagtaaagc attagcgcct tatcgacagt ttttgcaaaa aaactctgaa gagaaggaag
    53161 ccaattattt tcggaatttg ataaaacgaa cctggcctga agacataaaa agaaagataa
    53221 aacctgattc tttgctcata ttaattccgg catttacggt gagtcagtta acgcaggcat
    53281 ttcggattgg attacttatt tatcttccct ttctggctat tgacctgctt atttcaaata
    53341 tactgctggc tatggggatg atgatggtat cgccaatgac catttcatta ccgtttaagc
    53401 tgctaatatt tttactggca ggcggttggg atctgacact ggcgcaattg gtacagagct
    53461 tttcatgaat gattctgaat tgacgcaatt tataacgcaa cttttatgga tcgtcctttt
    53521 tacgtctatg ccggtggtgt tggtggcatc ggtagttggt gtcatcgtaa gtcttgtcca
    53581 ggccttgact caaattcagg accaaacgct acagttcatg attaaattat tagcaattgc
    53641 aataactttg atggtcagct acccatggct tagcggaatc ctgttgaatt atacccggca
    53701 gataatgtta cgaattggag agcatggttg aatgacacaa caggtaaatg agtggcttat
    53761 tgcattggct gtggctttta ttcgaccatt gagcctttct ttattacttc ctctattaaa
    53821 aagtggcagt ttaggggccg cgcttttacg taatggcgtg cttatgtcac ttacctttcc
    53881 catattacca atcatttacc agcagaagat tatgatgcat attggtaaag attacagctg
    53941 gttagggtta gtcaccggag aggtgattat tggtttttta attgggtttt gtgcggcggt
    54001 tcccttttgg gccgttgata tggcggggtt tctgcttgat actttacgtg gcgcgacaat
    54061 gggtacgata ttcaattcta caatggaagc tgaaacctca ctttttggct tgcttttcag
    54121 ccagtttttg tgtgttattt tctttataag cggcggcatg gagtttatat taaacattct
    54181 gtatgagtca taccaatatt taccgccagg gcgtacttta ttatttgatc ggcaattttt
    54241 aaaatatatc caggcagagt ggagaacgct ttatcaatta tgcatcagct tctctcttcc
    54301 tgccataata tgtatggtat tagccgatct ggctttaggt cttttaaatc ggtcggcaca
    54361 acaattgaat gtgtttttct tctcaatgcc gctcaaaagt atattagttc tactaacgct
    54421 cctgatctca ttcccttatg ctcttcatca ctatttggtt gaaagcgata agttttatat
    54481 ttatctaaaa gactggtttc catctgtatg agcgagaaaa cagaacagcc tacagaaaag
    54541 aaattacgtg atggccgtaa ggaagggcag gttgtcaaaa gtattgaaat aacatcatta
    54601 tttcagctga ttgcgcttta tttgtatttt catttcttta ctgaaaagat gattttgata
    54661 ctgattgagt caataacgtt cacattacaa ttagtaaata aaccattttc ttatgcacta
    54721 acgcaattga gtcatgcttt aatagagtca ctgacttctg cactgctgtt tctgggcgct
    54781 ggggtaatag ttgctactgt gggtagcgtg tttcttcagg tgggggtggt tattgccagc
    54841 aaggccattg gttttaaaag cgagcatata aatccggtaa gtaattttaa gcagatattc
    54901 tctttacata gcgtagtaga attatgtaaa tccagcctaa aagttatcat gttatctctt
    54961 atctttgcct ttttctttta ttattatgcc agtacttttc gggcgctacc gtactgtggg
    55021 ttagcctgtg gcgtgcttgt ggtttcttct ttaataaaat ggttatgggt aggggtgatg
    55081 gctttttata tcgtcgttgg catactggac tattcttttc aatattataa gattagaaaa
    55141 gatctaaaaa tgagtaaaga tgacgtaaaa caggagcata aagatctgga gggcgatcct
    55201 caaatgaaga cacggcgtcg ggaaatgcag agtgaaatac aaagtgggag tttagctcaa
    55261 tctgttaaac aatctgttgc ggtagtgcgt aatccaacgc atattgcggt ttgtcttggc
    55321 tatcatccca ccgatatgcc aataccacgc gtcctggaaa aaggcagtga tgctcaagct
    55381 aactatattg ttaacatcgc tgaacgcaac tgcatccccg ttgttgaaaa tgttgagctg
    55441 gcccgctcat tattttttga agtggaacgc ggagataaaa ttcctgaaac gttatttgaa
    55501 cccgttgcag ccttgttacg tatggtgatg aagatagatt atgcgcattc taccgaaaca
    55561 ccataaatgc ttttggtatg cttcttcagg ccactgcgaa ggttaagagg gtaatagcgt
    55621 atagagcagt gcttgacgat aaaggtgaga gactgaaaat aatcgctttt agcctggcac
    55681 aagcaccaga tagcgtatta taaaattaaa caagataatg gattggtgcg tctgaatgga
    55741 ctcgaaccat cgacccccac catgtcaagg tggtgctcta accaactgag ctacagacgc
    55801 attaaaatga tggtgcgttc aattggactc gaaccaacga cccccaccat gtcaaggtgg
    55861 tgctctaacc aactgagcta tgaacgcaac gttgtaggtg acaacgggga cgaatattag
    55921 cgtcacaacc gcaatgaggc aagagggaaa tcgcaatttt cttcctgaaa tcacctgatt
    55981 gcggtggaaa tatgcaacat gtcgaaaaaa tagccgccat gcgacggcta tcgtcgtatt
    56041 atcgcgcagc gcgctgcaaa atgatggcgg acggctgacg ttgtagatag cgcatccgta
    56101 gcatcattaa caccgccgcc gaggtcaggc cgatgatgaa ccccatccag aagcctgccg
    56161 gtcccatacg atccaccacc aaatccgtta acgccaggat ataaccgctg ggtaaaccta
    56221 acacccagta ggcggtaaag gtgataaaaa agatggaacg cgtatcttta taaccgcgca
    56281 gaataccgct gccgataacc tgtatagagt cggaaatctg gtaaaccgca gcgagcagca
    56341 ttaattgcgc ggcaagcgcc acgacctcag ggttgtcatt gtagagcaaa gcaatatgct
    56401 tacgcagagt aacggtaaaa atagcggtaa ccacagccat acaaatgccg acgcctaaac
    56461 cggtacgcgc tgcggtttgc gcatccagcg ttgagccctg gcccagacga taacccactc
    56521 gaatcgttac cgccgcagcc agcgacatcg gcagtacgaa catcagcgag ctaaagttaa
    56581 gcgcaatctg atgaccggcg acatccacaa tacctaatgg cgaaaccagc agcgcaacga
    56641 ccgcaaacaa cgtcacttca aagaacagcg ccagcgcaat cggcaacccc agttgaatca
    56701 ggcgcttcat gacgacgcta tcaggtttgc caaagccttt ttcattacga atatcacgca
    56761 ttgaacgcgc gtgtttaatg taagaaagca tggcgataaa catcacccaa tagaccgccg
    56821 cagtcgcaac gccgcagccg ataccgccga gttccggcat accaaaatgg ccatagataa
    56881 aaatatagtt caccggaata ttcaccagca ggcccaaaaa tcccatcacc atacccggtt
    56941 tggttttggc cagaccttcg cactggtttc gcgctacctg aaagaaaagg tatcctggcg
    57001 cgccccacag cagcgcgcga agataaccca cggctttatc ggccagcgcc ggatcaatat
    57061 tatgcataga gcggataatg tatccggcat tccacaggac gatcatcacc agcacggaga
    57121 caaagcccgc cagccagaac ccttgtcgaa cctgatgcgc gatacgctca cgacggccgg
    57181 agccattgag ttgcgcaatc acaggcgtca aggccagcag taagccgtga ccaaacaaaa
    57241 tggcgggaag ccagatagag gtgccgatag cgacggcagc catgtccgta gcgctatagc
    57301 ctcccgccat gacggtatcg acgaatccca ttgcggtctg tgccacttgc gcaaggatca
    57361 ccggtatcgc taacgctaat aactgacgcg cttcactggt atacttctgc acgtattcac
    57421 cttttatttt gttgttatat gaaagactaa aaagccgccg tagtggcagc caaaagaaat
    57481 agcaggggaa atttcagtct attgtagcgg ggtattacta tttctccagt gaaaaaacag
    57541 ttgttaacgg cgcattgctg gcaagctgtt tttccacctg ctattgtgct gaacagttct
    57601 gcgtttattt atttcaggag ttgaagatat gtttacgggg atcgtacagg gtaccgcgaa
    57661 actggtatcg attgatgaaa aacccaactt tcgcacccat gtggtgacgt taccggacta
    57721 catgctggag gggctggaga cgggggcgtc ggtagcgcat aacggatgct gtttgacggt
    57781 aactgaaata aacggcaatc agataagctt tgatctgatg aaagaaacgt tgcgcatcac
    57841 caatctgggc gcgttgaggg taggtgatga ggtcaacgta gagcgcgccg ccaaattcag
    57901 cgatgaaatc ggtggacatc tgatgtcggg gcatattatt acgacggcgg agatcgcgaa
    57961 aatcctgacc tctgaaaata accatcaggt gtggtttaaa gtgcaggatg cgtccctgat
    58021 gaagtatatc ctgtacaagg gctttatcgg cgtcgacggc atcagtttga ccgtcggcga
    58081 ggtaacgcca acgcgcttct gcgtgcatct cattccggaa acgctggaac gtactacgct
    58141 tggcagaaaa aaactgggtg agcgtgtgaa tatcgagatc gatccgcaaa cgcaggcggt
    58201 tgtcgatacc gtagaacgcg tactggctac acgagaaaat gtggtcagaa atcaggccga
    58261 cattggctaa cggaaaataa gattcccccg catgaaatgc gggggagatg attagcgagg
    58321 aacgcgcaga ccgttttcaa cgccgcgcgt aaataccacc tgccaaagct ggatatcacg
    58381 cgcgcgaaac gcacccgcgc aggcgttgag ataatagctg aacatacgtt taaagcgctc
    58441 gttataattg cccgcaatct ctggccaggc attgataaag cgctcatgcc acgccatcag
    58501 agtcgtgtca tagtcggcgc caaagttatg ccagtcttcc attacaaagt gtgattcgct
    58561 ggcctcggcg atttgacgaa cagacggcaa gcaaccgttg gggaaaatat acttattgat
    58621 ccacggatcg acattatgat cggttttttt agaaccaata gtatggagca ggaaaagacc
    58681 atccggtttt aaattcctgt caacaacttc aaaataggtg ttgtagtttt ttggcccgac
    58741 atgttcgaac atgccgacgg agacgattcg gtcaaactga tcgttaaggt cgcgataatc
    58801 ttccaggaga atggagacat ccagaccttc gcaacgcgtc tgcgccattt tttgttgttc
    58861 agcggagatc gttacgccca ccacgctaac gccataatgg gtcgccatat attgcgacag
    58921 gccgccccag ccgcagccga tatccagcac acgcatcccc ggttgtagct gtagcttttc
    58981 gcaaattaat ttcagcttgg cttgctgtgc cgcttccagc gtatcggcat ctttccagta
    59041 ggcgcaagaa tattgcatat agggatcgag catacgggaa aaaaggtcat taccaagatc
    59101 gtaatgttcc ttgccgacaa tccaggcgcg ttttttactt tgtagattaa tcagacgcgc
    59161 gccgaggata cggagcgtat ctttgacatg gtgggggagt tgattttcaa gaccggcacg
    59221 taagactttg ctgaagaaaa tatccagacg ctcgcattcc caccagccat ccatgtaact
    59281 ctcacctaac cccaacgatc cttcctggag gacgcgttta aaaaaatcgg gattcttaac
    59341 acgaatgtca gacggggcgg aaccattaat tgtaatatcc gcacgactta acaattcgtt
    59401 ggcgattcgg taccagttat catccggtac gctgacttct tctatacacg atgaactcat
    59461 agtttctcca tcactggacg gtgatcagaa ccttaaaaca gcgtagacgc ttttttggct
    59521 ttgtgagaaa tcccacggac aattccgtga gccagttatc cgacgtagaa cagaggaagg
    59581 gaggagccct tgccgaaaag gccatccatg gtgaatcggg aacactccgg ttcccgttaa
    59641 tgcctaataa ttatcgtaat ataacaaccg ggaatcagta taggccgcaa tttttgatga
    59701 ttcaaccgaa aattgttagc gtgctaatta ccagcggtta acaagtcttt agtgagactt
    59761 gtcgtgggcg acattggcat ggggaaatcc agtctcagcg caatctgcat gagactgcat
    59821 tttgtaacct aacgccgcca gaacaacggt agagagcatt acgctggtgg tggtcagcag
    59881 cggcgtgctg atgagccatg aaaccaccag gcttgccagg aaacataacc ccagttgcag
    59941 cgtattttgt agcgccgcag cgcgccccgt ggcttgaggg aaagggcgta acgcttgcgc
    60001 gacgacgata gggtagattg cgccattagc aatcgccatt acgcagaaag gaatcaggat
    60061 ctccaccagt gaggcattat tcagaaggcc cgctccccag gtggcgataa cgctcagcgc
    60121 atacagccct aacagccacg gaagcaattg gtagccctgc catttttgta gcgccgcgcg
    60181 gcaaccatat ccgccaatca gaaaagcgat ggtttgagga acatagctca ggccaatcac
    60241 tgccgggctg taacccatcg cgctgagaat aaacggggac cctgttagcc acgcaaaaaa
    60301 gctggcggaa caggcggcat aaatcagcac attaccgcga taggttttag agcgtaacaa
    60361 cgtcgcgaaa gtgagtttat cctgtccttc ggtacgcgct tttaccgatg gttttaagcg
    60421 cagcgccggc aacatcagca acaacgtaat cacgaacagg gtggcgaaaa tcacctgcca
    60481 tgagaaatgc gtcagtatcc agcttcccag taagggcgca agcgccgggg ataatcccac
    60541 cagtggcatg atcgtggcga agatacggtt aattttttgc gaaggataat aatcggtcac
    60601 cagcgcttgc cagattaccg ttgccgcaca aacgccgacg gcctgcacaa agcgcagcgt
    60661 cagcagtgct gccgcgcttt ctacccacag catccccaga cttccgagtg caaagataga
    60721 taaccccagc agtaaaatcg gtttacggcc ataacgatcc gatagcggtc cccaaagtag
    60781 ttgcgcgacg gcaaagccag ctaaaaacag gcttaggctg gcgctgacag cggcggcagg
    60841 cgtttgtaaa tccgcctgta tggcggcaaa cgcgggcagg tacatgtccg tagccagaaa
    60901 tcccagcacg ctaaggccgg ctaaccagac taaaaaacct tttccaggtt gcatatttgt
    60961 ttctctttct tatcagacag acattgtcgc agagtgtagg gagtgaaatt acggttgtga
    61021 aacgttaata tttgtccagt gaattcaaaa tttttgtagg caaattatgt ggtcggaata
    61081 ctcgcttgaa gtggttgacg ccgtggcgcg caatggcagt tttagcgcgg cggcgcaaga
    61141 actgcaccgt gtgccttcag cagtcagtta caccgttcgt cagttagagg agtggctggc
    61201 cgtaccgctt tttgtacgac gtcaccgtga tgttgaacta acgcctgctg gcgtctggtt
    61261 tttaaaagaa gggcgttctg ttatcaaaaa aatgcagatc actcgccaac agtgtcagca
    61321 aattgctaat ggctggcgcg ggcagttagc tattgcggtg gacaatatcg tcagaccaga
    61381 acgtacccgg cagatgatcg tcgattttta tcgtcatttt gacgatgtgg aactgctggt
    61441 ttttcaggag gtgtttaacg gcgtctggga cgcgctctcc gacgggcgtg tcgaactggc
    61501 gattggggcg acgcaggcga ttccggtagg ggggcgttac gcttttcggg atatggggac
    61561 cctgagctgg agctgcgtag tggcaagcga tcacccgctg gcgtcgatgc ctgggccgtt
    61621 aagcgatgat accctgcgca actggccgtc gctggtcagg gaagacactt cgcgaacctt
    61681 accgaaacgg attacctggt tgctggataa ccaaaaaagg gtcgtcgtac cggactggga
    61741 gtcatcggca acctgcctgt cggcaggact atgcgtggga atggtgccga cgcattttgc
    61801 ccgacagtgg atagacagcg gaaaatgggt ggcgctgacg ttagagaatc cgtttcccga
    61861 tgcggcctgt tgcgtgacgt ggcagcaaaa cgaggcctcg cccgcgctgg catggctgct
    61921 ggactatttg ggcgatagcg aaacgttgaa tcgggagtgg ctgcgggagc cagaagaggc
    61981 tcccgacagc ggggattaac gccgatagtc gcggaacggg ccgtcagcga ccgagcgacg
    62041 ctcaaccagg cgtggatgaa cttcaataga ctgtgactct tcacgcttat tgacgatgcg
    62101 atccaatagc atattaaatg cggtttcgcc taaagagtct ttgggctggt gaatcgtcgt
    62161 cagcgccggg gtaaagaaac gggcgttacg cacattgtca taaccgatca ccgaaacgtc
    62221 ctgcggtacg cgaagcccca tttcgtcagc tgcgcaaagc gcgcccatcg ccataatatc
    62281 gccgccgcag aaaacggcgg tagggcgatg tgactgcgat aagatttgct gcatcgcgtg
    62341 gtaaccggat tccggctcga agtcgccctg aacaatccag ttgtccggca cgttgatcag
    62401 cgcctcctcc atggctttca taaagcctgc cagccgcccc gcgcctgtgt tgcgctccag
    62461 cgggccggga ataacgccga tatcccggtg gccgcgctca accagataac gacccgccat
    62521 atagccgcct gcaaaggcgt tatcaatcac cgtgtcggta aaatcggcct tcgcctcacc
    62581 ccagtccatc accaccatcg gaatatggcg atactcttcc agcatggaaa gcagaggttc
    62641 tggatactca gaacacatca ccagcaggcc atccacgcgc ttttgcgcca tcatggacag
    62701 gtaggcgcgc tgtttttcca ggttattcca ggcgttgcct aaaatcagcg tatagccttt
    62761 ctggaaacag tttttttcaa ctgcctcgat aatttcggca aaataggccg cttcgctgct
    62821 ggtcgccagt aagcctatcg acttggtatg gttaaccttc aggctacgcg cgacggcgct
    62881 gggagagtag tgcagctctt taattgccgc ccagaccgcg ttacgcgttt cttcagcgac
    62941 aaaacgcgtt ttgttgatta cgtgtgatac agttgtagtg gaaacgtttg cccgtttcgc
    63001 tacatcttta attgttgcca ttacatttca ctccagaccc tcgctaagct cctgagaaac
    63061 gccaggtaaa cgtttgccta cacacaccct aatcgcaaca tcagggttgc ggcacgccgg
    63121 aaaaacgaca cggaacgtca ggaaggggtc aatggccgtt acgctaattc agtaagcctg
    63181 gaattttgtc tgatcttgag gaaaagggga agcgttaaaa acagttatca atataaaaca
    63241 tgagagattt ttgtgcggga atgtgcaaaa atgcgctata tcactttttg tgtgggaata
    63301 aaaaggagaa aacttgatga gtaccgacct gaaattttcg ttgattacta cgctgattgt
    63361 tctgggcgtg attgtcgcag gtggattaac ggccgctctg cactgatttc ctctcttctg
    63421 agagtgggcg tctcctctat tctatccctc tctaaaacgc agaaggcgta ccttctgcgt
    63481 actcagactt atgcggcgag atttttcgca acaaattccc agttaaccag cgcccagaaa
    63541 tgctccagat agtttggacg ggcgttgcgg tagtcgatgt aatacgcgtg ttcccacaca
    63601 tcaaccgtca gcaacggcgt tgcatccgta gtcagcggcg taccggcatt tgaggtagaa
    63661 acgatagcca gtttgccatc agcgcttttt accagccatg tccatccgga accaaagttt
    63721 ttgatagcgg catcggtgaa ctgcgcttta aattccgcga agctgccaaa agatgccgcg
    63781 atagcatcag ccagtttccc ggtcggttcg ccgccagcgt ttggcgccag gcagttccag
    63841 tagaaggtgt ggttccacac ctgagcggcg ttattaaaga tgccgccttc ggaagtgcgc
    63901 acgatctctt ccagcgattt gccttcaaac gccgtgcctt tgatcaaatt gttaagattg
    63961 gtcacgtaag tctgatgatg tttgccatag tgatattcca gcgtctcagc agaaatatgc
    64021 ggcgccagag catctttggc atacggtaat gcaggtaatt cgaacgacat tgcttctctc
    64081 cttattatta atattgcgca cgcacaataa ccctggtgcg cgtaaggata gggtagcaaa
    64141 ttgagaggtg gcgcaaaaga agaagttatc ctgtcgttaa acgacaggat aaaatattag
    64201 cgaattgttt taggcgtcat cacccggcgg gcgccgacat aatgacgctg ccagtactct
    64261 tcgttcagtg aggtgatctt aatttcctga ccgctgcgcg gagactggat aaacttaccg
    64321 ttgccgacat agacgccaac gtgatcagcg gtgccgcgcc cctgtgtacg gaagaacacc
    64381 agatcgccgt ttttcaactc gctacgctca atgggggccg cgtcacgcag gtgatacatc
    64441 tcattcgccg ttcgggggat acggatcttc actaaatctt tataggcata ataaaccaga
    64501 ccgctgcaat caaaaccggt gcgcggcgat gcgcctcccc agtgatacgg tttaccaatc
    64561 tgattcatga gcttggacat cgcggttttc gtcgcctttt gtacttttgc acgatgcgca
    64621 tcggcaatag agaccggcaa tgttcctttc cccttcacgc agtgcggctt acggccttta
    64681 cgcgtcgtgc atttttccgt tacgtcgagg gcggcgattg acgtgggcgc ggttctgtta
    64741 cgacgatgcg tcgtatgacg agattttgtg gcggcggtgg tacgttttgg cgtagaagcg
    64801 gaagaagaac ggctggtttt tgaggttttt tttacgtttt ttttgctggt tttactgatc
    64861 tttttagttg tgcttttctt tttatctgcc gttttcgtga catgagaaac agcaggcgtc
    64921 gctttggctt gcctggaagc atgggccatt ggcgtaaagg ggagagtagt aaaaagtaaa
    64981 gcacagagcg tgatcgagat tttgtttatc cgcgccactg agcaatcctc tgttaaaggc
    65041 aggcgattca tgcctgcgta tgatttacaa aacctgataa ttctaatcta caaaagcaca
    65101 gattggtaat tgcttttggt ttctgaagct atgtttcgtt aacagatgta aaaaaatagc
    65161 aattaatgct aaacacgaac gcgttatcta caaatcactg cgcggcaacc cgcttaaaag
    65221 atattttgta tacaacttat tcccgcagac ggtaaaataa taaggcatga tgaaaatgtt
    65281 attttccgtt gccagcctga cccgttacaa tgacaggctt cggtcgtaaa agtagtttaa
    65341 ggaagcgaga caatgagcac cactatcgaa aaaattcagc gccagatcgc tgaaaacccg
    65401 attctcctgt atatgaaagg ttcaccgaaa ctgccaagct gtggtttctc tgcgcaagcc
    65461 gttcaggcgc tttcagcctg cggggaacgt tttgcctatg ttgatatcct gcaaaacccg
    65521 gatattcgcg ctgaattacc gaaatacgcc aactggccga cattcccaca actgtgggtg
    65581 gacggcgagc tggtcggcgg gtgtgatatt gtgattgaaa tgtatcagcg tggcgagctg
    65641 cagcagctta ttaaagaaac tgcggcaaaa tataaaactc aggagccgga cgcagagtaa
    65701 tctgtgaaag gggaaagcga cctgtaaagg tcgctttttt accgccatcg tgagcaagag
    65761 cggcgttgtt agcctcgtta tttgtccgtc ggcaaaggta acggccagcc gcccaggcgc
    65821 ttccagcgat tgacgatttc acaaaacagc accgctgtcc gctcggtatc atacaaagcg
    65881 gaatgggctt tttcaccgtc aaactccata cctgccgcca ggcacgcttt tgataacacc
    65941 gtttgtccca gcgccagtcc gctcaatgcc gcagtatcaa aggtgacgaa cggatgaaac
    66001 gggttacgtt tcagcgaggc gcgctctgcg gcggccatca taaaactgtg atcaaaagtg
    66061 gcgttatgcg cgaccataat ggcgcggcta caaccgctgt ctttgatacc tttacgtacc
    66121 attttgaaaa tagcgtgtag cgcctcatat tcactcaccg cgccgcgtag cgggttagag
    66181 ggatcgatac cgttaaacgc aagcgcttcc ggctgtaagt tggctccagc gaacggctct
    66241 acatggaaat gcagcgtcat gtccggcatc aaccagcctt gttcatccat tttcagcgtg
    66301 atggcggcga tttcgagcag cgcatcggtt ttagcgttaa atcctgcagt ttcaacgtcg
    66361 atgacgacag gataaaaacc acgaaaacgg tcgcacagac cggaaagttg agcgttatcg
    66421 gacatctgag tctcttaata cgaaaaaatg cagcgcgtat tatggcaaat tttacgccgg
    66481 gatgcagtaa aacaacgggc gcagtgacct gcgcccggcg ggggatcagt tacccagacc
    66541 gcggcctgcg tctttagctt caatcaattc gattttatag ccatccggat cttcaacgaa
    66601 ggcgatgatg gtcgaaccgc cttttaccgg ccccgcttca cgggtcacgt tgccgccgtt
    66661 ctgacgaatg cgttcacagg cttcagcagc attgtcaacg ctcagcgcga tgtgcccata
    66721 cgcattgccc atgtcgtagc tctcaacgcc ccagttatag gttagttcga tgaccgcttc
    66781 ttccgtttcc ggaccatatc ccacaaaggc cagcgagtat ttgtattccg gattctcact
    66841 ggtacgcagc aatttcatgc ccagaacgtt agtgtaaaaa gcgatggaac gctgcaaatc
    66901 gccgacgcgc agcatagtat gcaataaacg cattttcgtt gtccttaaaa tagtcaagat
    66961 attcaaagta tagcggcgat gtgaggccgc tatcaatgaa attacagagt agggtagtca
    67021 gtgtagcctt ccgcgccgcc gccataaaaa ctttcgggac gctgtggatt aagttccgct
    67081 ttacgttgca gacgcgccac cagatccggg ttagcgatgt aatcgcgacc aaacgccacg
    67141 gcgtcaatca gccctttttc gatcagatct tccgcttttt ctggcgtata ggcgccagcg
    67201 ccgatgatgg gaccgtggaa acgcgcgcgc actttttcac ggaacgcgtc gctgtacggt
    67261 tcgccgcccg cccagtctgg ttcagacata tgcagataag cgatgccgcg tttgcctaac
    67321 gcttcaatca gataaagggc gtcagcttct tcattcgggc cgttatcgac attctggaaa
    67381 gtgccgacag gagaaaggcg gatgccgata cggtccgcgc cccattcctt aatgccggca
    67441 tcaaccacct ccagcaccag acgggcgcga ttctctacgc tgccgccgta ccgatcggta
    67501 cggtgattag aagacggtga gaggaactgg tgcagcagat aaccgtgcgc ggagtgcagc
    67561 tccaccagat cgaagcctgc ctctcgggca ttggcgatag cctggcggaa atcgttgacg
    67621 atcccgggga tctcatgagt atccagcgcg cgcggcgtgg aagtttctac gcggatggcc
    67681 tggccgtttt cgtcacgcaa agaggtgcgg gttcccgcat tgatagcgga tggcgcgacg
    67741 ggcgcttgtc cgcctggttg caggctggcg tgtgaaatac ggcccgtatg ccacagttgc
    67801 accgccatat ggccgccctg ggcatggact ccctgagtga tttttttcca ggcggcgatc
    67861 tgctcatcgc tgtgtaatcc cggtgcgccg gcatagcctt tcgcctgcgc ggagatttgt
    67921 gtggcttcgc tgatgatcaa tccggcgctg gcgcgttgac ggtaatattc cgccattaac
    67981 ggcgtaggaa tgtcgcccgg ttcaatactc cgcaaacgcg tcaaaggcgc cataaatacg
    68041 cgatttgtcg ccgtgatggc acccaccttg aggggggtaa acagttttgc tgatgacata
    68101 gtggctcctg atataagtag accggtcgtc ttgtaataaa ggaaataaaa acgcccgtta
    68161 ctgctcaggc gttgcaatga tggtcttaac atgcgccaac gcattttcca gcggcgcggc
    68221 gctacgggat attttggcct gcaaattggc gcccagccac agggcataaa gtacctgcgc
    68281 ctgtggcaac ggctggccgg tgaaatgtaa acagtggcta ttacggccat cttccagcgc
    68341 gcgtgcaagc agtgccatga tctcctgcgc ccctttatcc atcgtagagc gcatatcctc
    68401 cgacagatcg cagacttccg ctgacagttt caccgtcagg caaccgctga tggcgccttg
    68461 ctggcaaaac tgctttaacg tttcctgata ccaggcgaga agacgatcgc gatgattacc
    68521 gggaccggag gtgaagtgcg ccgtaagacg ctgatgatag caggcgtaat gtcgctcaag
    68581 catggcgacg ccgaaggctt ctttcgagcg aaagtagtga taaaacgacc ctttaggtac
    68641 ctgggcggtt ttgagcaact cgctaagccc catgccggta aaaccccgtt gcatacaaag
    68701 ctgctcgccg gtggccagca gatgttcgcg ggtatcatgt tcggtttgct tattcatgac
    68761 aggcagtata gtagaccagt cggtctactg caagcagagt tgccataatg tcagttagcg
    68821 tcttcaatag tcataagcgc caaacgttga ggaggggatg tggccgagca gttggagttt
    68881 tttcctgtag caagcccatg tcgcggtatc tgccagtctg atgagcgtgg cttttgtcgg
    68941 ggatgtatgc gcagccgcga cgaacggttt aactggcaaa aaatgagcga tgccgagaaa
    69001 caaaatgtac tgcggctttg tcgccagcgt ttcttgcgta aaatacgcgc aaataagcct
    69061 ctcccatcgg aagatcctca acaaccttca ctcttttaaa cgcggaattg cgtatactca
    69121 acctcattat tctctatgag gaatctgtta tggttcagcg tgtcaccatc gctccacaag
    69181 gcccggaatt ttcgcgtttt gtcatgggtt actggcgttt gatggactgg aatatgtccg
    69241 cgcgtcagtt agtgagtttt atcgaagaac atctggattt gggcgtcact accgttgacc
    69301 atgcggacat ttatggcggt tatcagtgcg aagcggcgtt tggcgaggcg ctaacgctgg
    69361 cgccgcattt gcgggaaaaa ctgcaaatcg ttaccaaatg tggtattgcg accaccgcca
    69421 gagcggaaaa taggctcggt cattatatta ccgatcgccg ccatattatt ctgagcgccg
    69481 aacagtcatt aaaagatctg gcgacagatt atctggatat gttgttaatt caccgtcccg
    69541 atccgttaat ggatgcggat gacgtcgccg aggcgtttca acatctacat caaagcggca
    69601 aagtgcgcca ttttggcgtt tctaatttta cgccagcgca atttacgttg ctgcaatcgc
    69661 gcctgccgtt caccctggcg accaaccagg tggagatctc gccggttcac cagcctttgt
    69721 tgctggacgg cacattagat caattacagc aactgcgtat tcgtccgatg gcctggtcat
    69781 gtcttggcgg cggtcgtctg tttaatgatg aggcttatca gccgttgcgc caggaacttt
    69841 ccgttatcgc gcaagaactc aacgctagtt ctattgaaca ggtggtctat gcctggattt
    69901 tacgtttgcc gtcgcagccg ctgccgatta ttggctcggg taaaatcgaa cgcgtacgcg
    69961 ccgcactaga agcggaaacg ctgtcattgt cgcgtcaaca gtggttccga atccgcaagg
    70021 cggcactggg ttatgacgtg ccgtaatcgc caactcgttg actttccgtt catgttttcg
    70081 ccagtggttt acacttaaca ggcgaccaca tgtaacggag gttttatgaa gcgattaagt
    70141 ttagcgatgg tgacgctgct ggcctgtgcg ggtgcgcagg ctgccagcga gaaagtagag
    70201 atgaatctgg tgacggcgca aggcgtagga cagtctatcg gcaccgtcgt catcgatgaa
    70261 accgaaggcg gcttaaaatt taccccacac cttaaagcgt tgccgccggg cgagcatggt
    70321 tttcacattc atgccaaagg tagctgccag cccgcgatta aagacggcaa agcggttgcc
    70381 gcagaagccg ctggtggtca tctggaccca caaaataccg gtaagcatga aggaccggaa
    70441 ggtcaggggc atctgggcga cctcccggtg ttagtcgtta ataatgatgg tatcgccacc
    70501 gaaccggtta ctgcgccgcg tctgaagtct cttgatgaag tgaaagataa agcgctcatg
    70561 atccatgtgg gcggcgataa catgtccgat cagccgaaac cgctcggcgg cggcggaacg
    70621 cgttacgcct gcggcgtcat taaataaccc ggagacagtg ttccctgcgc tggagcctgt
    70681 tccagctgcg acagcgaaca gtgtaaacgc cagataatcg ccgccagctc atgcgcggcg
    70741 ggttgatgat gatgtgcgag cgtgtcgcag atacgctgta gttcctgtag cgtgacggca
    70801 agcgggcgtt gctgcacgtc gcgctcgctc atcacatcgc gcagcaggga tatacaaata
    70861 tcccgcaccc gggaaagcgg atcggaacgc gactcccagg cgcgcagctg ccacaccaca
    70921 tgcgagcagt tcagcagcac cactccccaa cgtaataacc accggcgcgc cagcgcatcc
    70981 tgactattgc tgagctgact gacgtgatga taggtcagcg attcaaactc gctttcgcta
    71041 tgggaagggt gacggctaag ctgatcgacg aaatcccggc gtagcgcgcg gatatggcgg
    71101 cggcttttta cggcatcgga accggggcgc aaaatcgcaa acgccagcca ggaaatcgcg
    71161 acgccgacga tcttggcggt attatcgtta aggaagtcgg cgaagtcgta caccggtgga
    71221 ttggtcacgg cgatgaatga gcccataaaa acgataagct gcccccacag tcccgccagc
    71281 ttaggcatct gcagtttaag cagttgcatc gtgacgaaca gcggaaaaag gaaaagcaag
    71341 aattgccaca gatcggtgat ttgcaccatc aggccaaatt tcaccacgaa gctgaataag
    71401 gacagcagca ctaaagtacg catcaataag gaaagcgact taaacggcgt ggcgacgatg
    71461 gagtagagga cgcaactgat cgccgccagg gttaatgcgc cgggcccgga ttcccattgc
    71521 acgccaatac tccaggcgcc aatcaccgtg agcgtgcaaa aggtacgcac gccgctccag
    71581 atggcctctg cgttatccgt atgccgcgca aggccgggag tgcggcggat atggatttga
    71641 tccaccggcg cgccgctttc gatcagatat aattgacggc tgctgcgcag atatagctgg
    71701 caaaaatagc gtaatcgctg ccagaacgcg aggtgacgat aatcctgttc atcctgcggg
    71761 catagcggcg caataatccg cgccacggtg tagctgtccg cgcgcggttt tgccaactca
    71821 gctaagagtt gttcaatgac ttcgcggctg ttttccggcg gcgtcggcca gtttaaaagc
    71881 attctacgca gactggagat cacgctggtt agccgtaatt gctggtgtaa caatgcattt
    71941 agcaatgcat tctgacggcg aaaacggtag tgactccaga aggcctgaat acgcagcagg
    72001 ttcatggtca ggatttgccc aatgaccccc tcatgcgcgg agcggatagc gtcggtagtc
    72061 tccggctgcc acagtagact ggcatgttcc agcaagcgcg catgcatgtt tttcaacgcg
    72121 gtgagcaggg cagtgccatc cgatgtgctg ggtaggatca tcatcatcat gccgccacag
    72181 aggatgccga cgataacttc acatacacgt gcctgggcga tatcccacaa ctgcgtgatt
    72241 tctacaatat taaccatcgg gaacgcgatg atcgccgccg tgtagccgga caactggaaa
    72301 gcataagcgg cattattggt aaaatgcgcg caggcccagg tacaaaaacc gatccaggcg
    72361 gccatgctaa ataagaacaa ccagggttca ttcagcgtat ggccggcaat aatcaacgcg
    72421 gcggtcgcgc cgagtaaact cccggcaata cgccccagac ttttactgat tacgccgcct
    72481 acggtcggaa agctcaccac tgcggccgaa gtcatcgccc agtagggctc atccagattg
    72541 agataataag cgaatgtcag cgcgagacac atggcaatgg tattgcgcaa cgcgtaacgc
    72601 cactggccgg aggtcgcttt aaaccagggc gtatttcgca gggccggcag ggagagtttc
    72661 attaccgctg tccaatggct acgctgcagg tagtgccgga gacgagcgtg atatcctgcg
    72721 gcaaagcgtc aaattcgata cgtaccggta cgcgttgcgc cagacgtacc cacggtacgt
    72781 tgggtttgat atcgggcact aaaccggagt cactttccac gctttggtcg taaatagcgc
    72841 gcccgatact gccaacgtga ccctgtaact taacattgcc actatacagt gttattaatg
    72901 caggctcacc ttcgcggata tggcgtagtt tggtttcttc gaaatatccc attacataaa
    72961 atgaatggct atctaccagg gcgaaaagtg gcttaccggt gctagcataa tcaccggtac
    73021 gcgtggaaag gttggtcacc cagccggata ccggcgcttt tacttccgtc tggctaagct
    73081 gccactgcgc ctgttttaac gttgccagtg cgacatctac gctggcctgc atcgctttaa
    73141 cattcagatt ggcgctatcc agatcttcag cagagatgta gttacgcgat aaatgtcgac
    73201 gtcgatcggc ttcattattc gcttttgcca gatcggactg cgctttggcc aactgtgcct
    73261 gcgcgttaag ttctgcaata tggaagggcg ttttatcaat gacaaagaga acgtccccag
    73321 cgttgacgaa ctgattatct ttgatattga gttgggtaat gctgccagaa acctgtggcg
    73381 ttacgctgac ctgttccgcg cggattttac catcgcgcgt ccacggtgac tgcatatagt
    73441 aattccataa ccaccacgcg gccagaacgg cgacgacggc gacaatgaga gtagaaaaat
    73501 attttattgt ttttaacgac atatttacca cacgatcagt aaaacgaggc ccagacatac
    73561 gcaaagcgta aagagggaga gatccattaa caggggatgc cagatttcat cagagtatat
    73621 ccggtcacgc aggagtcggt gaataaacaa ccagataacg aacccaagcg caaaggcttt
    73681 gaagaatggc ggaaagtaaa cagatgctcc caacatgaga tcttgtaagg gcaatcctgt
    73741 ggcgttgagt atacacttca caagcaatgt tcctttgcgt cagacatcga tgctttagtt
    73801 ttagccaaaa ccgaagctac aggtgccagg tgcgcactat gtctgaaaaa atgtctattg
    73861 gtaagcaaat ttagcaatac atttgttttg agaatacaaa tactgcacac tattctaaaa
    73921 tcagcataat aacttagcaa gctaattata aggaggtgaa attggaatcg ccactaggtt
    73981 ctgatctggc acggttggtg cgcatttggc gtgctctgat tgaccatcgc ctcaagcctc
    74041 tggaattgac gcagacacat tgggtcacgt tgcacaatat tcatcaattg ccgcctgacc
    74101 agtcgcagat tcaattggct aaagcgatag gcattgagca gccatcgctg gtacgcacgt
    74161 tggatcaact tgaagataag gggctaattt cgcggcaaac ctgcgccagc gatcgtcgcg
    74221 ctaagcggat taaactgacc gaaaaagcgg agccgctgat cgctgagatg gaagaggtca
    74281 ttcataaaac gcgcggtgaa attttggctg ggatttcttc agaggagatt gagcttctga
    74341 ttaaacttgt cgctaaactt gaacacaaca ttatggaatt gcactctcac gattgaggtg
    74401 caggggcata cgtgtggcca tgtgaccaca cgtaaagcct ggtttagcgt ggagagacag
    74461 taacctggct gccgttgctg gccagcacga cacgctgacc tgccgagaaa cgcgtatttc
    74521 cttgtttctg cacaaccata atggtgttgc catcgtcttt acgaatttcc agttccacac
    74581 cctgggtttt attcattgcg c
//
LOCUS       DAGWFR010000006        73045 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.006, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000006 DAGWFR010000000
VERSION     DAGWFR010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 73045)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 73045)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..73045
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.006"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..144
                     /locus_tag="MOX77_000440"
     CDS             <1..144
                     /locus_tag="MOX77_000440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3356100.1"
                     /translation="TGAALVALMLNQFGDSGTHLSLLAAAILATLAAVVSGLRITQPR
                     VQA"
     gene            complement(192..1073)
                     /gene="htpX"
                     /locus_tag="MOX77_000441"
     CDS             complement(192..1073)
                     /gene="htpX"
                     /locus_tag="MOX77_000441"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014229823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease HtpX"
                     /protein_id="HCA3356101.1"
                     /translation="MMRIALFLLTNLAVMVVFGLVLSLTGIQSSSVQGLLIMALLFGF
                     GGSFISLLMSKWMALKSVGGEVIEQPRNERERWLMNTVATQARQAGIAMPQVAIYHAP
                     DINAFATGARRDASLVAVSTGLLQNMSPDEAEAVIAHEISHIANGDMVTMTLIQGVVN
                     TFVIFISRIIAQIAAGFLGGNRDEGEGSNGNPLIYFAVATVLELVFGILASIITMWFS
                     RYREFHADAGSAKLVGREKMIAALQRLKTSYEPQEATSMMAFCINGKSKSLSELFMTH
                     PPLDKRIEALRSGEYLK"
     gene            complement(1266..3314)
                     /gene="prc"
                     /locus_tag="MOX77_000442"
     CDS             complement(1266..3314)
                     /gene="prc"
                     /locus_tag="MOX77_000442"
                     /EC_number="3.4.21.102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxy terminal-processing peptidase"
                     /protein_id="HCA3356102.1"
                     /translation="MNTFFRLTALAGLLALAGQSFAVEDITRADQIPVLKEETQHATV
                     SERVTSRFTRSHYRQFDLDEAFSAKIFDRYLNLLDYSHNVLLASDVEQFAKKKTVLGD
                     ELRTGKLDVFYDLYNLAQKRRFERYQYALKVLERPMDFTGNDTFNLDRSKAPWPKDEA
                     ELNALWDGKVKFDELSLKLTGKSDKEIRETLTRRYKFAIRRLAQTNSEDVFSLAMTAF
                     AREIDPHTNYLSPRNTEQFNTEMSLSLEGIGAVLQMDDDYTVINSLVAGGPAAKSKSI
                     SVGDRIVGVGQAGKPMVDVIGWRLDDVVALIKGPKGSKVRLEILPAGKGTKTRIITLT
                     RERIRLEDRAVKMSVKTIGKEKVGVLDIPGFYVGLTDDVKVQLQKLEKQNVNSIVINL
                     RSNGGGALTEAVSLSGLFIPSGPIVQVRDNNGKVREDSDTDGVVYYKGPLVVLVDRFS
                     ASASEIFAAAMQDYGRALIVGEPTFGKGTVQQYRSLNRIYDQMLRPEWPALGSVQYTI
                     QKFYRVNGGSTQRKGVTPDIIMPTGNEETETGEKFEDNALPWDSIDAAKYVKSDDLAP
                     FGPELLKEHNARIAKDPEFQYIMKDIARFNAMKDKRNIVSLNYAQREKENNEEDALRL
                     ARINDRFKREGKPLLKKLDDLPKDYQEPDPYLDETVKIALDLAHLEKEKPAEQAATDK
                     "
     gene            complement(3334..4020)
                     /gene="proQ"
                     /locus_tag="MOX77_000443"
     CDS             complement(3334..4020)
                     /gene="proQ"
                     /locus_tag="MOX77_000443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone ProQ"
                     /protein_id="HCA3356103.1"
                     /translation="MENQPKLNSSKEVIAFLAERFPHCFSAEGEARPLKIGIFQDLVE
                     RVGGEMNLSKTQLRSALRLYTSSWRYLYGVKPGATRVDLDGNPCGELEEQHVEHARKQ
                     LEEAKARVQAQRAEQQAKKREAAAAAGEKEDAPRRERKPRPVARRKEGAERKPRADKP
                     TTKAPRAPREEKHTPVSDISVLTVGQSLKVKAGNNAMDATVLEITKDGVRVQLNSGMS
                     LIVRAEHLVF"
     gene            complement(4118..4615)
                     /locus_tag="MOX77_000444"
     CDS             complement(4118..4615)
                     /locus_tag="MOX77_000444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HCA3356104.1"
                     /translation="MSKTELYAALNRDFQSLMAGETSFLATLANTSALLFERLTEVNW
                     AGFYLLEGDTLVLGPFQGRIACVRIPVGRGVCGAAVAQNKVQRIDDVHAFDGHIACDA
                     ASNAEIVLPVTVGERIIGVLDIDSTAFGRFTEEDEHGLRTLVAQLETVLATTDYKKFF
                     ASVAG"
     gene            4744..6027
                     /gene="yebS"
                     /locus_tag="MOX77_000445"
     CDS             4744..6027
                     /gene="yebS"
                     /locus_tag="MOX77_000445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity lipid transport subunit YebS"
                     /protein_id="HCA3356105.1"
                     /translation="MALNTSHVTPTKKLTIRSVSEALPRSHYQRCPECDMLFSLPEMS
                     AHQSAYCPRCQAKIRDGRDWSLTRLTAMAVTMLLLMPFAWSEPLLHIYLLGVRIDANV
                     MHGIWQMTQQGDPLTAAMVLFCVVGAPLILVFSIAYLWFGSLLGMNLRPVLLMLEKLK
                     EWVMLDIYLVGIGVASIKVQDYAFLQPGIGLLAFVSLVVLSILTMIHLNVEQLWERFY
                     PQHPAQRADERLRVCLGCHFSGYPDAKGRCPRCHIPLRLRRKQSIQKCWAALLASIVF
                     LLPANLLPISVIYINGGRQEDTILSGIMSLASSNIAVAAVVFIASILVPFTKVIVMFT
                     LLLSIHFKCQQGLRTRILLLRLVTWIGRWSMLDLFVISLTMSLINRDQILAFTMGPAA
                     FYFGAAVILTILAVEWLDSRLLWDAHESGNARFED"
     gene            5996..8629
                     /locus_tag="MOX77_000446"
     CDS             5996..8629
                     /locus_tag="MOX77_000446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416348.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MCE family protein"
                     /protein_id="HCA3356106.1"
                     /translation="MSQETPASKTEAQIKTKRRISPFWLLPLIALMIAGWLVWDSYQD
                     RGNSVTIDFMSADGIVPGRTPVRYQGVEVGTVEDVSLSKDLRKIEVRVSIKSDMEDAL
                     REETQFWLVTPKASLAGVSGLDALVGGNYIGMMPGKGKPRDHFVALDTQPKYRLSNGD
                     LMIHLNAPDLGSLNSGSLVYFRKIPVGRVYDYSINPNKQGVTIDVLIERRFTDLVKKG
                     SRFWNVSGIDADLSLSGAKVKLESLAALVNGAIAFDSPDNSKPAAQDDTFGLYKDLAH
                     SQRGVIVKLELPSGDGLKAESTPLMYQGLEVGELSKLTLNPGGKVTGEMTVDPSVVPL
                     MRENTRIELRNPKLSLSDANISSLLTGKTFELVPGDGEPRSEFVVVPGEKALLHEANA
                     LTLTLTAPESYGIEPGQPLILHGVKIGQVIERNLSSKGVSFIVAIEPQHRDLVQGDSK
                     FVVNSRVDVKVGLDGVEFLGASASEWIDGGIRILPGTSGKMKSTYPLYANLEKALENS
                     LSDLPTTTLTLTAETLPDVQAGSVVLYRKFEVGEVITVRPRANTFDIDLHIKPEYRHL
                     LTSNSVFWAEGGAKVQLNGSGLTVQASPLSRALKGAISFDNLSGASASRRKGDKRILY
                     ASETSARAVGGQITLHAFDAGKLAEGMPIRYLGIDIGQIQTLELITARNEVQAKAVLY
                     PEYVQTFARAGTRFSVITPQISAAGVEHLDTILQPYINVEPGRGAARRDFELQEATIT
                     DSRYLDGLSIVVEAPEAGSLNIGTPVLFRGIEVGTVTGMSLGSLSDRVMITLRISKRY
                     QYLVRNNSVFWLASGYSLDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQAGK
                     HFLLQESEPKEWREWGTALPR"
     gene            8707..10146
                     /gene="rsmF"
                     /locus_tag="MOX77_000447"
     CDS             8707..10146
                     /gene="rsmF"
                     /locus_tag="MOX77_000447"
                     /EC_number="2.1.1.178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1407)-C(5))-methyltransferase
                     RsmF"
                     /protein_id="HCA3356107.1"
                     /translation="MAQHAVYFPDAFLTQMREAMPSTLSFDEFISACQRPLRRSIRIN
                     TLKISVADFLALIAPYGWSLTPIPWCHEGFWIERDDEEALPLGSTAEHLSGLFYIQEA
                     SSMLPVAALFADDNHPQRVMDMAAAPGSKTTQIAARMGNRGAILANEFSASRVKVLHA
                     NISRCGIANTALTHFDGRVFGAALPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESN
                     LDIAATQRELLDSAFHALRPGGTLVYSTCTLNRQENEAVCLWLKETYADAVEFLPLGD
                     LFPDADRALTPEGFLHVFPQIYDCEGFFVARLRKMSSLPAMPAPGYKVGAFPFTSLKG
                     REALNVTQAANAVGLLWDENLHLWQREKEVWLFPAEIESLIGKVRFSRLGIKLAESHN
                     KGYRWQHEATIALACPTHAHAFELSVQEAEEWYRGRDIYPQTPPAADDVLVTFQHQPL
                     GLAKRIGARIKNSYPRELVRDGKLFTGNS"
     gene            10264..10500
                     /locus_tag="MOX77_000448"
     CDS             10264..10500
                     /locus_tag="MOX77_000448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707284.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1480 family protein"
                     /protein_id="HCA3356108.1"
                     /translation="MKTSVRIGAFEIDDAELHGESPGERTLTIPCKSDPDLCMQLDAW
                     DAETSVPAILNGEHSVLFRNHYDPKSDAWVMRLA"
     gene            10611..10802
                     /locus_tag="MOX77_000449"
     CDS             10611..10802
                     /locus_tag="MOX77_000449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebW family protein"
                     /protein_id="HCA3356109.1"
                     /translation="MFALVLFVCYLDGGCEDIVVDIYDTEQQCLYSMDDQRIRHGGCF
                     PVEDFIDGFWRPAQQYSDF"
     gene            complement(10821..11471)
                     /gene="pphA"
                     /locus_tag="MOX77_000450"
     CDS             complement(10821..11471)
                     /gene="pphA"
                     /locus_tag="MOX77_000450"
                     /EC_number="3.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-serine/threonine phosphatase"
                     /protein_id="HCA3356110.1"
                     /translation="MMRPEEIYQRIEAKNWRHVWVVGDIHGCFSMLMKRLRECQFDPQ
                     QDLLVSVGDLIDRGPDSLGCLALLRESWMTAVRGNHEQMALDARASSQSTLWLMNGGD
                     WFTRLTAEHAAQAEALFILCQRLPWILEVRCRHSTHVIAHADYPASTYQWQKKVDLHQ
                     VLWSRERLINKRGGISGADHFWFGHTPLRRRMDFANIHYIDTGAVFGGQLTLARIQ"
     gene            complement(11695..11859)
                     /locus_tag="MOX77_000451"
     CDS             complement(11695..11859)
                     /locus_tag="MOX77_000451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356111.1"
                     /translation="MPPLKKIVLRLFVGAMVATVTTPALALVCLEDHSAKECAISCAE
                     VMWFMFPICF"
     gene            complement(12144..12865)
                     /gene="sopE2"
                     /locus_tag="MOX77_000452"
                     /pseudo
     CDS             complement(12144..12865)
                     /gene="sopE2"
                     /locus_tag="MOX77_000452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460811.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-1 type III secretion system guanine
                     nucleotide exchange factor SopE2"
     gene            13549..13944
                     /locus_tag="MOX77_000453"
     CDS             13549..13944
                     /locus_tag="MOX77_000453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1398 domain-containing protein"
                     /protein_id="HCA3356112.1"
                     /translation="MELQLMLNHFFERVRKDANFNAFLIDLEYNNIAYYIYFVATGNV
                     KIITHAGHFISIKSNRKLIKVNSTPNTQLIKLTSAKHFSGEHSYEKYCTDLATAGVFK
                     WIVELNKKTRQYWSKDNQLLYIENVVMPL"
     gene            14273..14749
                     /locus_tag="MOX77_000454"
     CDS             14273..14749
                     /locus_tag="MOX77_000454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000030934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356113.1"
                     /translation="MSKDEISYQILYRYSLEKLYSTLTRRVDNVLSFALVFLGVGVTI
                     NVGSPFILGPGIVGIAILKRVLRFGTRSTQADRQSRAWLKLFNTQHRFPSDKTLFLAF
                     TSLEQDASEVWSMLIGPAIVMTETALGKTPIEPLTAGEKLCAFLSGATKSQPAARN"
     gene            complement(15137..15556)
                     /locus_tag="MOX77_000455"
     CDS             complement(15137..15556)
                     /locus_tag="MOX77_000455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HCA3356114.1"
                     /translation="MDIQITHQVTEFDKEELLAGLRSYNAQFVDFSKNGQLGVYCRNE
                     SGEMVGGLIADRKGPWLCIDYLWVSESARSRGLGSQLMEMAEKEGLRKGCVHGLVDTF
                     SFQALPFYEKQGHILQMSLPDFPKVGSQRHYLIKPDL"
     gene            15927..16193
                     /locus_tag="MOX77_000456"
     CDS             15927..16193
                     /locus_tag="MOX77_000456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356115.1"
                     /translation="MKFDNAWNQGVWYALRSATGRLSPQPFSVEDLPALGEECRRIMK
                     ITSAVYTSKKTLSERWFASAELLNLYLTKYGLSCLNCSRKKTTA"
     gene            16362..16502
                     /locus_tag="MOX77_000457"
     CDS             16362..16502
                     /locus_tag="MOX77_000457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460815.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356116.1"
                     /translation="MFRSTRTLPRNLQTYTEQASTEELHTDLNNMQSTGLYSIQQMVL
                     QL"
     gene            complement(16544..17749)
                     /locus_tag="MOX77_000458"
                     /pseudo
     CDS             complement(16544..17749)
                     /locus_tag="MOX77_000458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000343613.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS256 family transposase"
     gene            17819..18240
                     /locus_tag="MOX77_000459"
                     /pseudo
     CDS             17819..18240
                     /locus_tag="MOX77_000459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001189081.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
     gene            19539..20453
                     /locus_tag="MOX77_000460"
     CDS             19539..20453
                     /locus_tag="MOX77_000460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HCA3356117.1"
                     /translation="MRKVSISILFMLVSLTWGTTWLAMRIAVETIPPVFATGMRFMFA
                     APFLIIIAWLRKKNLLFPPGQRLFQFVICIFYFSIPFSLMIYGETYVNSGLAAIIFAN
                     MPVAVLIASVLFLNEKAKLMQIAGLTIAITALTGILLEETNTSTESHWQGITALISAV
                     LIHAIIYTQCKKRSCTVSVITFNALPCLLAGLILSATGWFFERPQVSTFSVHSILATL
                     YLGAFAGVFGILCYFALQQKANAFQASLVFLIFPLIAVSLEDYIYGYAISTHSMLLII
                     PLAIGIFLTLVARNIPVTSRCRDNSSQK"
     gene            20586..20744
                     /locus_tag="MOX77_000461"
     CDS             20586..20744
                     /locus_tag="MOX77_000461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356118.1"
                     /translation="MFMFLPFLLALSVAMGAINRKDKVSYILWAVLLIVTILSFIHHM
                     TNSLTLSF"
     gene            20754..21368
                     /locus_tag="MOX77_000462"
     CDS             20754..21368
                     /locus_tag="MOX77_000462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein B"
                     /protein_id="HCA3356119.1"
                     /translation="MKTHHHPTTFVHLINQIGLLGICVALVVAFYYQLVRHELPCPIC
                     LLQRAGLIIAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGS
                     AFFGLHFYTWTLITSILIIIAVAVVLAISSMNAAFRSLNINPNLFSIVGWVFLLLITA
                     NLISTVLECGGGECAANPVTYKLLSKQDIAFLKTGLLTRTVLRL"
     gene            complement(21777..23756)
                     /locus_tag="MOX77_000463"
     CDS             complement(21777..23756)
                     /locus_tag="MOX77_000463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020078314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HCA3356120.1"
                     /translation="MRLKSIVKSFALAGLLSSTALTPLFAQEAPKGATASTKQANNAL
                     YNQLPFSDNTDFTNAHKGFIADLPAEVIKGEQGNVIWNPQQYAFIKEGEKSPDTVNPS
                     LWRQSQLINISGLFEVTDGVYQIRNLDLSNMTIIEGKEGITVVDPLVSAETAKAGMDL
                     YFKNRGNKPVVAIIYTHSHVDHYGGVRGVVDEADVKSGKVKVYAPAGFMEAAVAENIM
                     AGNVMSRRASYMYGNLLKPDASGQVGAGLGTTTSAGTVTLIAPTNIIDKDGQKEVIDG
                     LTYDFMLAPGSEAPSEMLWFIEEKKLIEAAEDVTHTLHNTYSLRGAKIREPLPWSKYI
                     NEAIVRWGDKAEIIMAQHHWPTWGNENVVGLLKSQRDLYRYINDQTLRMANEGLTRDE
                     IAANFKLPDSLAKTWANRGYYGSISHDVKATYVLYLGWFDGNPATLDELPPEEAAKKF
                     VEYMGGADAILQKAKADFDQGNYRWVAQVVSKVVFADPNNQNARNLEADALEQLGYQA
                     ESGPWRNFYLTGAQELRNGVVKGPTPNTASPDTVRAMTPEMFFDFLAVHINGEKAGNA
                     RAVFNIDLGSDGGKYKLELENGVLNHTANAEAKDADATITLNRDTLNKIILKEETLKQ
                     AQDKGEVNVTGNAAKLDEMLGYMDKFEFWFNIVTP"
     gene            24152..25282
                     /locus_tag="MOX77_000464"
     CDS             24152..25282
                     /locus_tag="MOX77_000464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000529511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HCA3356121.1"
                     /translation="MGQDSDDRRRTSSAGRVWQDHKDMVRQALRVSIPWFTFVNISFA
                     LIILFRHILISDFDKSISAQTGILPLIDDIMGSIIVFSFLILLFIYRLPARFTPLCLV
                     MLLILSLMWSYCSYCFIVWWQLPFAWPLSVILMLTALAALYYHLPALLLFIVPLWLTA
                     LLASVQLNQYVNIRFLLVWLTLTAILIYGRFILQRWFDEAWLRYQENRMLIARLDVMA
                     HQDALTGTANRRSMESFLGDALRQTEPFALIMLDVDYFKNYNDNYGHQAGDACLAKVA
                     CVVKRSIRTPADLVARYGGEEFVVVLPSSSLNEAALVAKRIQTNLRETALPHVASAVS
                     ETVTVSMGITLSTAGDTVTGIIARADEALYRAKQQGRNRWVK"
     gene            complement(25568..25963)
                     /locus_tag="MOX77_000465"
                     /pseudo
     CDS             complement(25568..25963)
                     /locus_tag="MOX77_000465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000089414.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF977 family protein"
     gene            complement(25976..26086)
                     /locus_tag="MOX77_000466"
                     /pseudo
     CDS             complement(25976..26086)
                     /locus_tag="MOX77_000466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000140163.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="replication protein"
     gene            26087..26448
                     /locus_tag="MOX77_000467"
                     /pseudo
     CDS             26087..26448
                     /locus_tag="MOX77_000467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415865.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecT"
     gene            26450..26755
                     /locus_tag="MOX77_000468"
                     /pseudo
     CDS             26450..26755
                     /locus_tag="MOX77_000468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001189081.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
     gene            complement(27119..27472)
                     /locus_tag="MOX77_000469"
     CDS             complement(27119..27472)
                     /locus_tag="MOX77_000469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebY family protein"
                     /protein_id="HCA3356122.1"
                     /translation="MKKILLPALLLATSGVALAAPQVITVSRFEVGKDKWAFNREEVM
                     LTCRPGQALYVINPSTLVQYPLNAIAEQQVAEGKTRAQPIAIIQIDNPAKPGEKMSLA
                     PFIERAQKLCDPSNS"
     gene            complement(27489..28364)
                     /gene="copD"
                     /locus_tag="MOX77_000470"
     CDS             complement(27489..28364)
                     /gene="copD"
                     /locus_tag="MOX77_000470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper homeostasis membrane protein CopD"
                     /protein_id="HCA3356123.1"
                     /translation="MMLTFVWITLRFIHFASLMLVYGCALYGAWLAPASIRRLMTRRF
                     LHLQRHAAAWSVISAAFMLAIQGGLMGGGWPDVFSVSVWGAVLQTRFGAVWIWQIILA
                     LVTLAVVVIAPVKMQRRLLILTVAQFILLAGVGHATMRDGVAGTLQQINHALHLLCAA
                     AWFGGLLPVVYCMRMAQGRWRQHAISAMMSFSRYGHFFVAGVLLTGIGNTLFITGFTA
                     IWQTTYGQLLLLKCALVVLMVAIALTNRYVLVPRMRQENPRTDLWFVRMTQIEWGVGG
                     IVLAIVSLFATLEPF"
     gene            complement(28365..28739)
                     /gene="yobA"
                     /locus_tag="MOX77_000471"
     CDS             complement(28365..28739)
                     /gene="yobA"
                     /locus_tag="MOX77_000471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopC domain-containing protein YobA"
                     /protein_id="HCA3356124.1"
                     /translation="MASSAPSRRLALLLLASTFATPAAWAHAHLTHQYPAANAAVTAS
                     PQALTLNFFEGIEPGFSGATITGPQQESIKTRPAKRNEQDKTQLIIPLEQPLKSGAYT
                     VDWHVVSVDGHKTKGKYTFSVK"
     gene            28877..29107
                     /locus_tag="MOX77_000472"
     CDS             28877..29107
                     /locus_tag="MOX77_000472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit theta"
                     /protein_id="HCA3356125.1"
                     /translation="MKTNLAQLEQAEMDKVNVDLAAAGVAFKERYNMPVVAEAVEREQ
                     PEHLRAWFRERLIAHRLASVSLSRLPYEPKVK"
     gene            29215..29871
                     /locus_tag="MOX77_000473"
     CDS             29215..29871
                     /locus_tag="MOX77_000473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HCA3356126.1"
                     /translation="MSSWKIAAAQYAPLNASPAEHVAHHLEYIELAARQQCELLVFPS
                     LSLLGCDERNKPLPAPPDEALLQPLTHAADTHHMTIIVGMPVEHNCRFVKGIAIFAPW
                     LTSPLMFHKSHGACIARQRSAINVVDEQPEGGDIGPSFTLFTTSQCLNEPELHASTSR
                     LQRFSHKYALAVLMANACGSSALWDESGQLIVRADCGSLLLTGLRTTEGWQGDIIPLR
                     "
     gene            29895..30593
                     /gene="exoX"
                     /locus_tag="MOX77_000474"
     CDS             29895..30593
                     /gene="exoX"
                     /locus_tag="MOX77_000474"
                     /EC_number="3.1.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease X"
                     /protein_id="HCA3356127.1"
                     /translation="MLRIIDTETCGLQGGIVEIASVDVIDGNIVNPMSHLIRPDRPIT
                     PQAMAIHRITEAMVADKPWIEDVIPLYYGSEWYVAHNASFDRRVLPELPGEWICTMKL
                     SRRLWPGIKYSNMALYKSRKLSVQTPPGLHHHRALYDCYITAALLIDIMRTTGWTAEE
                     MVNITGRPALLTTFPFGKYRGKAVSEVAKRDPGYLRWLFNNLDNMSPELRLTLKHYLE
                     DVQAGEQRSNGTPQ"
     gene            complement(30630..32681)
                     /gene="ptrB"
                     /locus_tag="MOX77_000475"
     CDS             complement(30630..32681)
                     /gene="ptrB"
                     /locus_tag="MOX77_000475"
                     /EC_number="3.4.21.83"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptidase B"
                     /protein_id="HCA3356128.1"
                     /translation="MLPKANRIPYAMTVHGDTRIDNYYWLRDDTRSQPEVLDYLHQEN
                     EYGRKVMSSQQALQDRILKEIIDRIPPREVSAPYVKNGYRYRYIYEPGCEYAIYQRQS
                     ALSEEWNVWETLLDANQRAAHSEFYTLGGLAITPDNTIMALAEDYLSRRQYGLRFRNL
                     ESGNWYPELLDNVAPEFVWANDSLTLYYVRKHKKTLLPYQVWRHTIGTPSSQDELVYE
                     EKDDTFYVSLHKTTSQHYVVIHLASATTSEVLLLDAELADAEPFSFLPRRKDHEYSLD
                     HYQHKFYLRSNRNGKNFGLYRTRVRNENAWEELIPPREHIMLEGFTLFTDWLVVEERQ
                     RGLTSLRQINRKTREVIGIAFDDPAYVTWLAYNPEPETSRLRYGYSSMTTPDTLFELD
                     MDTGERRVLKQTEVPGFDSGCYQSEHLWITARDGVEVPVSLVYHQKYFRKGQNPLLVY
                     GYGSYGSSIDADFSSSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKRNTFNDY
                     LDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINERPELFHGVIAQVPFVDVLTTML
                     DESIPLTTGEFEEWGNPQDIEYYDYMKSYSPYDNVKAQDYPHLLVTTGLHDSQVQYWE
                     PAKWVAKLRELKTDQRLLLLCTDMDSGHGGKSGRFKSYEGVALEFAFLIGLAQGTLHS
                     A"
     gene            complement(32895..33554)
                     /locus_tag="MOX77_000476"
     CDS             complement(32895..33554)
                     /locus_tag="MOX77_000476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance TerB family protein"
                     /protein_id="HCA3356129.1"
                     /translation="MANWLNQLQSLLGQKGASASPSGEQGLNKLLVPGALGGLAGLLV
                     ANKSSRKLLTKYGTGALLVGGGAVASSVLWNKYKDKVRAAHQGEPQFGSQSTPLDIRT
                     ERLILALVFAAKSDGHIDAKERAAIEHQLRESGVEEQGRVFIEKAIEQPLDPQRLAQG
                     VRNEEEALEIYFLSCAAIDIDHFMERSYLNALGDALKIPQEVRDGIEQDLQQQKQALP
                     G"
     gene            complement(33648..34001)
                     /locus_tag="MOX77_000477"
     CDS             complement(33648..34001)
                     /locus_tag="MOX77_000477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356130.1"
                     /translation="MNKRGALLSLLLLSASVSAFAASTESKSVKFPQCEGLDAAGIAA
                     SVKRDYQQNRIVRWADDQKKVGQADPVAWVNVQDVVGQNDKWTVPLTVRGKSADIHYQ
                     VIVDCKAGKAEYKPR"
     gene            complement(34069..34359)
                     /gene="yebG"
                     /locus_tag="MOX77_000478"
     CDS             complement(34069..34359)
                     /gene="yebG"
                     /locus_tag="MOX77_000478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA damage-inducible protein YebG"
                     /protein_id="HCA3356131.1"
                     /translation="MAVEVKYVVIREGEEKMSFTSKKEADAWDKMLDTADLLDTWLEQ
                     SPVVLEDGQREALSLWMAEHKEVLSTILKTGKLPSPQAVEKDAASKTKKQAA"
     gene            34490..35668
                     /gene="purT"
                     /locus_tag="MOX77_000479"
     CDS             34490..35668
                     /gene="purT"
                     /locus_tag="MOX77_000479"
                     /EC_number="2.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate-dependent phosphoribosylglycinamide
                     formyltransferase"
                     /protein_id="HCA3356132.1"
                     /translation="MTLLGTALRPAATRVMLLGAGELGKEVAIECQRLGIEVIAVDRY
                     PDAPAMHVAHRSHVINMLDGEALRHVITEEKPHYIVPEIEAIATDTLRELEGEGLNVV
                     PCARATQLTMNREGIRRLAAEELGLPTSTYRFADSEASFHDAVAAVGFPCIVKPVMSS
                     SGKGQSFIRSAEQLAQAWEYAQQGGRAGAGRVIVEGVVKFDFEITLLTVSAVDGVHFC
                     APVGHRQQDGDYRESWQPQQMSELALKRAQEIARHVVLALGGHGLFGVELFVCGDEVI
                     FSEVSPRPHDTGMVTLISQDLSEFALHVRAFLGMPIGAIRQYGPAASAVILPQLTSQN
                     VTFDDVHAAVGAGVQVRLFGKPEIDGTRRLGVALATGENVEEAVIRAKKAASRVTVKG
                     "
     gene            complement(35768..36409)
                     /gene="kdgA"
                     /locus_tag="MOX77_000480"
                     /gene_synonym="eda"
     CDS             complement(35768..36409)
                     /gene="kdgA"
                     /locus_tag="MOX77_000480"
                     /gene_synonym="eda"
                     /EC_number="4.1.2.14"
                     /EC_number="4.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 4-hydroxy-2-oxoglutarate
                     aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase"
                     /protein_id="HCA3356133.1"
                     /translation="MKNWKTSAEAILTTGPVVPVIVVNKLEHAVPMAKALVAGGVRVL
                     EVTLRTACAMDAIRAIAKDVPEAIVGAGTVLNPQQLAEVTEAGAQFAISPGLTEPLLK
                     AATAGTIPLIPGISTVSELMLGMDYGLKEFKFFPAEANGGTKALQAIAGPFSQVRFCP
                     TGGISLANYRDYLALKSVLCIGGSWLVPADALEAGDYDRITKLAREAVEGAKQ"
     gene            complement(36447..38258)
                     /gene="edd"
                     /locus_tag="MOX77_000481"
     CDS             complement(36447..38258)
                     /gene="edd"
                     /locus_tag="MOX77_000481"
                     /EC_number="4.2.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphogluconate dehydratase"
                     /protein_id="HCA3356134.1"
                     /translation="MNPNLLRVTQRIVERSQQTRKAYLARIEQAKTATVHRSQLACGN
                     LAHGFAACQPEDKASLKSMLRNNIAIITSYNDMLSAHQPYEHYPQIIRQALHSVNAVG
                     QVAGGVPAMCDGVTQGQDGMELSLLSREVIAMSAAVGLSHNMFDGALFLGVCDKIVPG
                     LAMAALSFGHLPAIFVPSGPMASGLPNKEKVRIRQLYAEGKVDRMALLESEAASYHAP
                     GTCTFYGTANTNQMVVEFMGMQLPGSSFVHPDAPLREALTAAAARQVTRLTGNGNTWM
                     PLGKMIDEKVVVNGIVALLATGGSTNHTMHLVAMARAAGILINWDDFSDLSEVVPLMA
                     RLYPNGPADINHFQAAGGVPVLMRELLNAGLLHEDVNTVAGFGLKRYTLEPWLNNGEL
                     DWREGAERSLDNDVIASFDKPFSPHGGTKVLSGNLGRAVMKTSAVPVENQIIEAPAMV
                     FESQHDVLPAFDAGLLDRDCVVVVRHQGPKANGMPELHKLMPPLGVLLDRRFKIALVT
                     DGRLSGASGKVPSAIHVTPEAYDGGLLAKVRDGDIIRVNGQTGELTLLVDEAELAARQ
                     PHIPDLSASRVGTGRELFGALREKLSGAEQGATCITF"
     gene            complement(38493..39968)
                     /gene="zwf"
                     /locus_tag="MOX77_000482"
     CDS             complement(38493..39968)
                     /gene="zwf"
                     /locus_tag="MOX77_000482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HCA3356135.1"
                     /translation="MAVTQTAQACDLVIFGAKGDLARRKLLPSLYQLEKAGQIHPDTR
                     IIGVGRADWDKEAYTHVVREALETFMKEKIDEGLWDTLSGRLDFCNLDVNDTPAFSRL
                     GDMLDQKNRTTINYFAMPPSTFGAICKGLGEAKLNAKPARVVMEKPLGTSLATSREIN
                     DRVGEYFEECQVYRIDHYLGKETVLNLLALRFANSLFVNNWDNRTIDHVEITVAEEVG
                     IEGRWGYFDQAGQMRDMIQNHLLQILCMIAMSPPSDLSADSIRDEKVKVLKSLRRIDR
                     SNVREKTVRGQYTAGFAQGQKVPGYLEEEGANKSSNTETFVAIRVDIDNWRWAGVPFY
                     LRTGKRLPTKCSEVVVYFKTPELNLFKESWQDLPQNKLTIRLQPDEGVDIQVLNKVPR
                     LDHKHNLQITKLDLSYSETFNQTHLADAYERLLLETMRGIQALFVRRDEVEEAWKWVD
                     SITEAWAMDNDAPKPYQAGTWGPVASVAMITRDGRSWNEFE"
     gene            40310..41179
                     /locus_tag="MOX77_000483"
     CDS             40310..41179
                     /locus_tag="MOX77_000483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HCA3356136.1"
                     /translation="MNMLEKVQSQLEHLSKSERKVADVILAAPGRSIHLSIAMLAQEA
                     NVSEPTVNRFCRSMNTRGFPDFKLHLAQSLANGTPYVNRNVDEDDSVEAYTGKIFESA
                     MASLDHVRQSLDKSAVNRAVDLLTQAKKIAFFGLGSSAAVAHDAMNKFFRFNVPVIYS
                     DDIVLQRMSCMNCNDDDVVVLISHTGRTKSLVELAQLARENDAMVIALTSAGTPLARE
                     ATLAITLDVPEDTDIYMPMVSRLAQLTVIDVLATGFTLRRGAKFRDNLKRVKEALKES
                     RFDKELLIRSDDR"
     gene            41303..42745
                     /gene="pyk"
                     /locus_tag="MOX77_000484"
     CDS             41303..42745
                     /gene="pyk"
                     /locus_tag="MOX77_000484"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HCA3356137.1"
                     /translation="MSRRLRRTKIVTTLGPATDRDNNLEKVIAAGANVVRMNFSHGSP
                     EDHKMRADKVREIAAKLGRHVAILGDLQGPKIRVSTFKEGKVFLNIGDKFLLDANLGK
                     GEGDKEKVGIDYKGLPADVVPGDILLLDDGRVQLKVLEVQGMKVFTEVTVGGPLSNNK
                     GINKLGGGLSAEALTEKDKADIQTAALIGVDYLAVSFPRCGEDLNYARRLARDAGCDA
                     KIVAKVERAEAVCDQNAMDDIILASDVVMVARGNLGVEIGDPELVGIQKALIRRARQL
                     NRAVITATQMMESMITNPMPTRAEVMDVANAVLDGTDAVMLSAETAAGQYPSETVAAM
                     ARVCLGAEKIPSINVSKHRLDVQFDNVEEAIAMSAMYAANHLKGVTAIITMTESGRTA
                     LMTSRISSGLPIFAMSRHERTLNLTALYRGVTPVHFDSAADGVVAAHEAVNLLRDKGY
                     LVSGDLVIVTQGDVMSTVGSTNTTRILTVE"
     gene            complement(42818..43789)
                     /gene="lpxM"
                     /locus_tag="MOX77_000485"
                     /gene_synonym="msbB"
     CDS             complement(42818..43789)
                     /gene="lpxM"
                     /locus_tag="MOX77_000485"
                     /gene_synonym="msbB"
                     /EC_number="2.3.1.243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460846.1"
                     /note="LpxM is lauroyl-Kdo(2)-lipid IV(A)
                     myristoyltransferase, an enzyme characterized in
                     Escherichia coli and involved in biosynthesis of the form
                     of lipid A found in that species and some closely related
                     species; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase"
                     /protein_id="HCA3356138.1"
                     /translation="METKKNNSEYIPEFEKSFRYPQYWGAWLGAAAMAGIALTPASFR
                     DPLLATLGRFAGRLGKSSRRRALINLSLCFPQRSEAEREAIVDEMFATAPQAMAMMAE
                     LAMRGPKKIQQRVDWEGLEIIEEMRRNDEKVIFLVPHGWGVDIPAMLMASQGQKMAAM
                     FHNQGNPVFDYIWNTVRRRFGGRLHARNDGIKPFIQSVRQGYWGYYLPDQDHGPEHSE
                     FVDFFATYKATLPAIGRLMKVCRARVIPLFPVYNGKTHRLTIQIRPPMDDLLTADDHT
                     IARRMNEEVEIFVGPHPEQYTWILKLLKTRKPGEIQPYKRKDLYPIK"
     gene            complement(43906..45225)
                     /gene="mepM"
                     /locus_tag="MOX77_000486"
     CDS             complement(43906..45225)
                     /gene="mepM"
                     /locus_tag="MOX77_000486"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein DD-endopeptidase MepM"
                     /protein_id="HCA3356139.1"
                     /translation="MQQIAGSVALAFNNLPRPHRVMLGSLTVLTLAVAVWRPYVYHPE
                     SAPIVKTIELEKSEIRSLLPEASEPIDQAAQEDEAIPQDELDDKTAGEVGVHEYVVST
                     GDTLSSILNQYGIDMSDISRLAASDKELRNLKIGQQLSWTLTADGDLQRLTWEVSRRE
                     TRTYDRTANGFKMSSEMQQGDWVNSLLKGTVGGSFVASAKEAGLTSSEISAVIKAMQW
                     QMDFRKLKKGDEFSVLMSREMLDGKREQSQLLGVRMRSDGKDYYAIRAADGKFYDRNG
                     VGLAKGFLRFPTAKQFRISSNFNPRRLNPVTGRVAPHRGVDFAMPQGTPVLSVGDGEV
                     VVAKRSGAAGYYIAIRHGRTYTTRYMHLRKLLVKPGQKVKRGDRIALSGNTGRSTGPH
                     LHYEVWINQQAVNPLTAKLPRTEGLTGSDRREYLAQVKEILPQLRFD"
     gene            complement(45241..46185)
                     /gene="znuA"
                     /locus_tag="MOX77_000487"
     CDS             complement(45241..46185)
                     /gene="znuA"
                     /locus_tag="MOX77_000487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein
                     ZnuA"
                     /protein_id="HCA3356140.1"
                     /translation="MLQKNTLLFAALSAALWGSATQAADAAVVASLKPLGFIASAIAD
                     GVTDTQVLLPDGASEHDYSLRPSDVKRLQGADLVVWVGPEMEAFMEKSVRNIPDNKQV
                     TIAQLADVKPLLMKGADDDEDEHAHTGADEEKGDVHHHHGEYNMHLWLSPEIARATAV
                     AIHEKLVELMPQSRAKLDANLKDFEAQLAATDKQVGNELAPLKGKGYFVFHDAYGYYE
                     KHYGLTPLGHFTVNPEIQPGAQRLHEIRTQLVEQKATCVFAEPQFRPAVVEAVARGTS
                     VRMGTLDPLGTNIKLGKTSYSAFLSQLANQYASCLKGD"
     gene            46264..47019
                     /gene="znuC"
                     /locus_tag="MOX77_000488"
     CDS             46264..47019
                     /gene="znuC"
                     /locus_tag="MOX77_000488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter ATP-binding protein ZnuC"
                     /protein_id="HCA3356141.1"
                     /translation="MTSLVSLENVSVSFGQRRVLSDVSLELSPGKILTLLGPNGAGKS
                     TLVRVVLGLVAPDEGVIKRNGQLRIGYVPQKLYLDTTLPLTVNRFLRLRPCTQKTDIL
                     PALKRVQAGHLIDAPMQKLSGGETQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALY
                     DLIDQLRRELDCAVLMVSHDLHLVMAKTDEVLCLNHHICCSGAPEVVSMHPEFISMFG
                     PRGAEQLGIYRHHHNHRHDLQGRIVLRRGNGHS"
     gene            47016..47801
                     /gene="znuB"
                     /locus_tag="MOX77_000489"
     CDS             47016..47801
                     /gene="znuB"
                     /locus_tag="MOX77_000489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter permease subunit ZnuB"
                     /protein_id="HCA3356142.1"
                     /translation="MIELLLPGWLAGMMLACAAGPLGSFVVWRRMSYFGDTLAHASLL
                     GVAFGLLLDVNPFYAVIAVTLLLASGLVWLEKRPHLAIDTLLGIMAHSALSLGLVVVS
                     LMSNVRVDLMAYLFGDLLAVTPEDLISIAIGVVIVLAILFWQWRNLLSMTISPDLAFV
                     DGVKLQRVKLLLMLVTALTIGVTMKFVGALIITSLLIIPAATARRFARTPEQMAGVAV
                     GVGMIAVTGGLTFSAFYDTPAGPSVVLCAALLFIFSMMKKQAS"
     gene            complement(47880..48890)
                     /gene="ruvB"
                     /locus_tag="MOX77_000490"
     CDS             complement(47880..48890)
                     /gene="ruvB"
                     /locus_tag="MOX77_000490"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HCA3356143.1"
                     /translation="MIEADRLISAGATIAEDVADRAIRPKLLAEYVGQPQVRSQMEIF
                     IQAAKRRGDALDHLLIFGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLT
                     NLEPHDVLFIDEIHRLSPVVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGA
                     TTRAGSLTSPLRDRFGIVQRLEFYQVPDLQHIVGRSARHMGLEMSDDGALEVARRARG
                     TPRIANRLLRRVRDFAEVKHDGAISAEIAAQALDMLNVDAEGFDYMDRKLLLAVIDKF
                     FGGPVGLDNLAAAIGEERETIEDVLEPYLIQQGFLQRTPRGRMATVRAWNHFGITPPE
                     MP"
     gene            complement(48899..49510)
                     /gene="ruvA"
                     /locus_tag="MOX77_000491"
     CDS             complement(48899..49510)
                     /gene="ruvA"
                     /locus_tag="MOX77_000491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012131997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HCA3356144.1"
                     /translation="MIGRLRGIILEKQPPIVLLETGGVGYEVHMPMTCFYELPEAGQE
                     AIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAV
                     EREELGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLFTPAVDLVLTSPASPTSEDAE
                     QEAVAALVALGYKPQEASRMVSKIARPDASSETLIRDALRAAL"
     gene            complement(49870..50562)
                     /locus_tag="MOX77_000492"
     CDS             complement(49870..50562)
                     /locus_tag="MOX77_000492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000227317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356145.1"
                     /translation="MVDDKPMKIGWVFYFSYIFVAIIFHLFISFCYCLSIDMAEANTV
                     VFLLKPGTISLLFLLLPARRFRTRLLATLSSVFIALVFNQWHLVAGNKELVLCMQAAC
                     FMAFLAMTSVKKSGWMISASLFLVCAAGTIRQCWLEQLFNAADIYIVDDGRSCGASGH
                     CFQYIAAKGRGLAAKRQALFSSEEYVNIYYSYSEGIPAVNFDGMKNEFAQYLLCHGEL
                     KYVVRDDKTTCD"
     gene            50772..51371
                     /locus_tag="MOX77_000493"
     CDS             50772..51371
                     /locus_tag="MOX77_000493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebB family permuted papain-like enzyme"
                     /protein_id="HCA3356146.1"
                     /translation="MKKHYPVQYETGDIVFTCIGAALFGQISTASQCWSNHVGIIIGH
                     NGDDYLVAESRVPLSTVTTLSLFIQRSAGQRYAVRRLCGGLTVEQKLAIMEQVPARLN
                     KFYHTGFKYESSRQFCSKFVFDIYKEALCIPVGDIETFEELLHSNPDAKLTFWKFWFL
                     GSIPWDRKTVTPASLWQHPNLELISACGIENPQREAEGE"
     gene            complement(51373..51894)
                     /gene="ruvC"
                     /locus_tag="MOX77_000494"
     CDS             complement(51373..51894)
                     /gene="ruvC"
                     /locus_tag="MOX77_000494"
                     /EC_number="3.1.22.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005068993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HCA3356147.1"
                     /translation="MSIILGIDPGSRITGYGVIRQVGRQLTYLGSGCIRTKVDDLPSR
                     LKLIYAGVTEIITQFQPDYFAIEQVFMAKNADSALKLGQARGVAIVAAVNQELPVFEY
                     AARQVKQTVVGIGSAEKSQVQHMVRTLLKLPANPQADAADALAIAITHCHVSQNAMQM
                     SESRLNLARGRLR"
     gene            complement(51931..52671)
                     /locus_tag="MOX77_000495"
     CDS             complement(51931..52671)
                     /locus_tag="MOX77_000495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000907250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HCA3356148.1"
                     /translation="MAGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGGDPD
                     ANPRLRAAVDKALANNMTRDTLNRAIARGVGGDEDSNMETIIYEGYGPGGTAIMIECL
                     SDNRNRTVAEVRHAFSKCGGNLGTDGSVAYLFSKKGVISFEKGDEDTIMEAALEAGAE
                     DVVTYDDGAIDVYTAWEEMGKVRDALEAAGLKADSAEVSMIPSTKADMDAETAPKLLR
                     LIDMLEDCDDVQEVYHNGEISDEVAATL"
     gene            complement(52701..53153)
                     /gene="nudB"
                     /locus_tag="MOX77_000496"
     CDS             complement(52701..53153)
                     /gene="nudB"
                     /locus_tag="MOX77_000496"
                     /EC_number="3.6.1.67"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin triphosphate diphosphatase"
                     /protein_id="HCA3356149.1"
                     /translation="MKDKVYKRPVSVLVVIFAQDTKRVLMLQRRDDPDFWQSVTGSIE
                     EGETALQTAVREVKEEVTIDVAAEQLTLVDCQRTVEFEIFSHLRHRYAPGVMHNTEFW
                     FCLALPHERQVIFTEHLTYQWLDAPDAAALTKSWSNRQAIEEFVINVA"
     gene            complement(53256..55028)
                     /gene="aspS"
                     /locus_tag="MOX77_000497"
     CDS             complement(53256..55028)
                     /gene="aspS"
                     /locus_tag="MOX77_000497"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HCA3356150.1"
                     /translation="MRTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGI
                     VQVFFDPDRADALKLASELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTII
                     NRADSLPLDANHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDI
                     ETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRD
                     EDLRADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLGDFPVMTFAEAE
                     RRYGSDKPDLRNPMELVDVADLLKSVEFAVFAGPANDPKGRVAALRVPGGAQLSRKQI
                     DDYGNFVKIYGAKGLAYIKVNERAKGLDGINSPVAKFLTADIVEAILERTGAQDGDMI
                     FFGADNKKVVADALGALRLKLGKDLSLTDEDKWAPLWVIDFPMFEDDGEGGLTAMHHP
                     FTAPRDMTASELKTAPEEAVANAYDMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQ
                     EQREKFGFLLDALKYGTPPHVGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTE
                     APSFANQAALTELGIQVVKKAENN"
     gene            55353..55919
                     /locus_tag="MOX77_000498"
     CDS             55353..55919
                     /locus_tag="MOX77_000498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrolase"
                     /protein_id="HCA3356151.1"
                     /translation="MLKLNATTTALVVIDLQEGILPFAGGPYTANEVVARAARLAEKC
                     RANGSPVVMVRVGWSDDYAEALKQPVDAATPAHALPENWWTWPTALGKKDSDLEVTKR
                     QWGAFYGTDLELQLRRRGIDTIILCGISTNIGVESTARNAWELGFNLIIAEDACSAAS
                     SEQHQSSMTHIFPRIGRVRSVEDILNAL"
     gene            55916..56734
                     /locus_tag="MOX77_000499"
     CDS             55916..56734
                     /locus_tag="MOX77_000499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HCA3356152.1"
                     /translation="MIYIGLPQWSHPKWARLGITSLEEYARHFNCVEGNTTLYALPKA
                     EIVDRWYAQTTDDFRFCFKFPATISHQAALRHCDDLVQAFFTRLAPLETRIGQYWLQL
                     PAAFGPRDLPALWQFLDALPATFTYGVEVRHPCFFDKGEDEQRLNRGLHARGVNRVIL
                     DSRPVHAAHPHSEAVRDAQRKKPKVPVHAVVTASHPMVRFIGSDNMAQNREFFAAWLQ
                     KLPQWRQTTTPFLFLHTPDIAQAPELVNTLWHDLRSVLPEIGTAPSIPQQSSLF"
     gene            56787..57182
                     /locus_tag="MOX77_000500"
     CDS             56787..57182
                     /locus_tag="MOX77_000500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MAPEG family protein"
                     /protein_id="HCA3356153.1"
                     /translation="MVSALYAVLGALLLMKFSFNVVRLRMQYRVAYGDGGFSELQSAI
                     RIHGNAVEYIPVALVLLLFMEMNGAETWMVHICGIILIAGRLMHYYGFHHRLFRWRRA
                     GMSATWCALLLMVLANLWYMPWELVFSLY"
     gene            57223..57966
                     /gene="cmoA"
                     /locus_tag="MOX77_000501"
     CDS             57223..57966
                     /gene="cmoA"
                     /locus_tag="MOX77_000501"
                     /EC_number="2.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxy-S-adenosyl-L-methionine synthase CmoA"
                     /protein_id="HCA3356154.1"
                     /translation="MSHRDTLFSAPIARLGDWTFDERVAEVFPDMIQRSVPGYSNIIS
                     MIGMLAERFVQPNTQVYDLGCSLGAATLSVRRNIRHEHCRIIAVDNSPAMIERCRRHI
                     DAYKAPTPVEVVEGDIRDITIENASMVVLNFTLQFLEPAERQALLDKIYLGLNPGGAL
                     VLSEKFSFEDAKVGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDSVETHKARL
                     RQAGFEHSELWFQCFNFGSLVALKAGVAA"
     gene            57963..58934
                     /gene="cmoB"
                     /locus_tag="MOX77_000502"
     CDS             57963..58934
                     /gene="cmoB"
                     /locus_tag="MOX77_000502"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic
                     acid(34) synthase CmoB"
                     /protein_id="HCA3356155.1"
                     /translation="MIEFGNFYQLIAKNHLSHWLETLPAQIAAWQREQQHGLFKQWSN
                     AVEFLPEITPWRLDLLHSVTAESETPLSEGQLKRIDTLLRNLMPWRKGPFSLYGVDID
                     TEWRSDWKWDRVLPHLSDLTGRTILDVGCGSGYHLWRMIGAGAHLAVGIDPTQLFLCQ
                     FEAVRKLLGNDQRAHLLPLGIEQLPALKAFDTVFSMGVLYHRRSPLEHLWQLKDQLVN
                     EGELVLETLVVDGDENTVLVPGDRYAQMRNVYFIPSAPALKKWLEKCGFVDVRIADVC
                     VTTTEEQRRTEWMVTESLADFLDPNDRSKTVEGYPAPQRAVLIARKP"
     gene            complement(59170..59917)
                     /gene="cutC"
                     /locus_tag="MOX77_000503"
                     /pseudo
     CDS             complement(59170..59917)
                     /gene="cutC"
                     /locus_tag="MOX77_000503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460864.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="copper homeostasis protein CutC"
     gene            complement(59937..60506)
                     /locus_tag="MOX77_000504"
     CDS             complement(59937..60506)
                     /locus_tag="MOX77_000504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HCA3356156.1"
                     /translation="MANWQHIDELHDISADLPRFTLAFRELSTRLGLQINALEADHIS
                     LRCHQNTTAERWRRGFEQCGELLSENIINGRPICLFKLHEPVCVEHWRFSVIELPWPG
                     EKRYPHEGWEHIEIVLPGEPETLNARALALLSDEGLSQPGIVVKTSSPQGEHERLPNP
                     TLAVTDGRVTVKFHPWSIEAIVASEQAAH"
     gene            60743..62476
                     /gene="argS"
                     /locus_tag="MOX77_000505"
     CDS             60743..62476
                     /gene="argS"
                     /locus_tag="MOX77_000505"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001025321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HCA3356157.1"
                     /translation="MNIQALLSEKVSQAMIAAGAPADCEPQVRQSAKVQFGDYQANGM
                     MAVAKKLGMAPRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQVQQALTS
                     DRLGVSQPTRQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHHVIRANHVG
                     DWGTQFGMLIAWLEKQQQENAGDMALADLEGFYRDAKKHYDEDETFAERARNYVVKLQ
                     SGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKG
                     LAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVL
                     YYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLGKDGKPFKTRTGGTVKLAD
                     LLDEALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML
                     AFEGNTAPYMQYAYTRVLSVFRKADIDEQALASAPVIISEDREAQLAARLLQFEETLT
                     VVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENDAVRNSRLKLAQLTAKTLKLGL
                     DTLGIETVERM"
     gene            62665..63834
                     /gene="mrdA"
                     /locus_tag="MOX77_000506"
     CDS             62665..63834
                     /gene="mrdA"
                     /locus_tag="MOX77_000506"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR03423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HCA3356158.1"
                     /translation="MTFKDFDAEEKLFLRRVIVAFGVVVVCFGILIFNLYNLQIRQHH
                     YYTTRSNENDIKMLPVAPTRGIIYDRNGIPLVRNVTWYDIAVTPYKIADMDALLKQLT
                     PIVDLSPDDIADFRRALKSSSRYRPVVLKNALTDVEIARFAVNQFHFNGVTINSYQDR
                     QYPYGAELAHVLGYVSKINDNDLKALDKKGLAENYAADHNIGKQGIERYYENDLHGKT
                     GYQEVEVDNHGRIVRLLKDVPPIAGKNIHLTLDLHLQEYIESLLAGQRAAVLVEDPHD
                     GSVLAMVSMPSYDPNPFVKGISYQDYGKLLHDKNLPLINRVTQGLYPPASTVKPYMAM
                     SALLCGIITPQTTFFGAPTWTLPGTQRHYRDWKKTGHGMLDVTKAIEESADTFFY"
     gene            63844..64536
                     /locus_tag="MOX77_000507"
     CDS             63844..64536
                     /locus_tag="MOX77_000507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000971841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HCA3356159.1"
                     /translation="MMGIDRIDTMLSQFGYGKPTGIDLSEEYDGLLPSRAWKQRVHKK
                     AWYQGDTISVGIGQGYWIATPIQMVKAMVALINNSKVIAPHLLLNEESGKTVVPYRPS
                     GTPAQIADPASPYWGLVRQAMYGMANAPNGTGYKFFHTAPYGIAAKSGTSQVFSLKEN
                     QTYNAKMIPIRLRDHVFYTAFAPYKNPKVAIALILENGGSDGVTAAPIMRKILDHLFD
                     PQADTTQSGQAP"
     gene            complement(64590..65729)
                     /locus_tag="MOX77_000508"
     CDS             complement(64590..65729)
                     /locus_tag="MOX77_000508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 105 protein"
                     /protein_id="HCA3356160.1"
                     /translation="MMVYPVKHSPLLRQPEHFIARDELKALVQKVTHNLVNIKDETGE
                     FLLRLDDGRVIDTKGWAGWEWTHGVGLYGMYHYYQQTGDQTMRKIIDDWFADRFAEGA
                     TTKNVNTMAPFLTLAYRYEETRNPAYLPWLETWAEWAMNEMPRTDYGGMQHITLAEEN
                     HQQMWDDTLMMTVLPLAKIGKLLNRPEYVEEATYQFLLHVQNLMDKETGLWFHGWSYD
                     GHHNFANARWARGNSWLTIVVPDFLELLDLPENNAVRRYLVQVLNAQIAALAKCQDES
                     GLWHTLLDDPHSYLEASATAGFAYGILKAVRKRYVERHYAQVAEKAIRGIVKHISPEG
                     ELLQTSFGTGMGHDLDFYRHIPLTSMPYGQAMAMLCLTEYLRNYF"
     gene            complement(65966..66358)
                     /gene="flhe"
                     /locus_tag="MOX77_000509"
     CDS             complement(65966..66358)
                     /gene="flhe"
                     /locus_tag="MOX77_000509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein FlhE"
                     /protein_id="HCA3356161.1"
                     /translation="MRKWLALLLFPLTVQAAGEGAWQDSGMGVTLNYRGVSASSSPLS
                     ARQPVSGVMTLVAWRYELNGPTPAGLRVRLCSQSRCVELDGQSGTTHGFAHVPAVEPL
                     RFVWEVPGGGRLIPALKVRSNQVIVNYR"
     gene            complement(66358..68436)
                     /gene="flhA"
                     /locus_tag="MOX77_000510"
     CDS             complement(66358..68436)
                     /gene="flhA"
                     /locus_tag="MOX77_000510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhA"
                     /protein_id="HCA3356162.1"
                     /translation="MANLVAMLRLPSNLKSTQWQILAGPILILLILSMMVLPLPAFIL
                     DLLFTFNIALSIMVLLVAMFTQRTLDFAAFPTILLFTTLLRLALNVASTRIILMEGHT
                     GAAAAGKVVEAFGHFLVGGNFAIGIVVFIILVIINFMVITKGAGRIAEVGARFVLDGM
                     PGKQMAIDADLNAGLIGEDEAKKRRSEVTQEADFYGSMDGASKFVRGDAIAGILIMVI
                     NVVGGLLVGVLQHGMSMGSAAESYTLLTIGDGLVAQIPALVISTAAGVIVTRVSTDQD
                     VGEQMVGQLFSNPRVMLLAAAVLGLLGMVPGMPNLVFLLFTAALLGLAWWLRGREEKA
                     PEEPQPVKMPENNSVVEATWNDVQLEDSLGMEVGYRLIPMVDFQQDGELLGRIRSIRK
                     KFAQDMGFLPPVVHIRDNMDLQPARYRILMKGVEIGSGDAYPGRWLAINPGTAAGTLP
                     GEKTVDPAFGLDAIWIESALKEQAQIQGFTVVEASTVVATHLNHLIGQFSAELFGRQE
                     AQQLLDRVSQEMPKLTEDLVPGVVTLTTLHKVLQNLLAEKVPIRDMRTILETLAEHAP
                     LQSDPHELTAVVRVALGRAITQQWFPGNEEVQVIGLDTALERLLLQALQGGGGLEPGL
                     ADRLLAQTQEALSRQEMLGAPPVLLVNHALRPLLSRFLRRSLPQLVVLSNLELSDNRH
                     IRMTATIGGK"
     gene            complement(68429..69580)
                     /gene="flhB"
                     /locus_tag="MOX77_000511"
     CDS             complement(68429..69580)
                     /gene="flhB"
                     /locus_tag="MOX77_000511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system protein
                     FlhB"
                     /protein_id="HCA3356163.1"
                     /translation="MAEESDDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVC
                     IIWFGGESLARQLAGMLSAGLHFDHRMVNDPNLILGQIILLIKAAMMALLPLIAGVVL
                     VALISPVMLGGLIFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAVLKSTLVGCVT
                     GFYLWNHWPQMMRLMAESPIVAMGNALDLVGLCALLVVLGVIPMVGFDVFFQIFSHLK
                     KLRMSRQDIRDEFKESEGDPHVKGKIRQMQRAAAQRRMMEDVPKADVIVTNPTHYSVA
                     LQYDENKMSAPKVVAKGAGLIALRIREIGAEHRVPTLEAPPLARALYRHAEIGQQIPG
                     QLYAAVAEVLAWVWQLKRWRLAGGQRPPQPENLPVPEALDFMNEKNTDG"
     gene            complement(69774..70418)
                     /gene="cheZ"
                     /locus_tag="MOX77_000512"
     CDS             complement(69774..70418)
                     /gene="cheZ"
                     /locus_tag="MOX77_000512"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase CheZ"
                     /protein_id="HCA3356164.1"
                     /translation="MMQPSIKPADEGSAGDIIARIGSLTRMLRDSLRELGLDQAIAEA
                     AEAIPDARDRLDYVVQMTAQAAERALNSVEASQPHQDAMEKEAKALTQRWDEWFDNPI
                     ELSDARELVTDTRQFLRDVPGHTSFTNAQLLDIMMAQDFQDLTGQVIKRMMDVIQEIE
                     RQLLMVLLENIPEQSARPKRENESLLNGPQVDTSKAGVVASQEQVDDLLDSLGF"
     gene            complement(70429..70818)
                     /gene="cheY"
                     /locus_tag="MOX77_000513"
     CDS             complement(70429..70818)
                     /gene="cheY"
                     /locus_tag="MOX77_000513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002210873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis response regulator CheY"
                     /protein_id="HCA3356165.1"
                     /translation="MADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALN
                     KLQAGGFGFIISDWNMPNMDGLELLKTIRADSAMSALPVLMVTAEAKKENIIAAAQAG
                     ASGYVVKPFTAATLEEKLNKIFEKLGM"
     gene            complement(70836..71885)
                     /gene="cheB"
                     /locus_tag="MOX77_000514"
     CDS             complement(70836..71885)
                     /gene="cheB"
                     /locus_tag="MOX77_000514"
                     /EC_number="3.1.1.61"
                     /EC_number="3.5.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000036372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-glutamate methylesterase/protein
                     glutamine deamidase"
                     /protein_id="HCA3356166.1"
                     /translation="MSKIRVLSVDDSALMRQIMTEIINSHSDMEMVATAPDPLVARDL
                     IKKFNPDVLTLDVEMPRMDGLDFLEKLMRLRPMPVVMVSSLTGKGSEVTLRALELGAI
                     DFVTKPQLGIREGMLAYSEMIAEKVRTAARARIAAHKPMAAPTTLKAGPLLSSEKLIA
                     IGASTGGTEAIRHVLQPLPLSSPAVIITQHMPPGFTRSFAERLNKLCQISVKEAEDGE
                     RVLPGHAYIAPGDKHMELARSGANYQIKIHDGPPVNRHRPSVDVLFHSVAKHAGRNAV
                     GVILTGMGNDGAAGMLAMYQAGAWTIAQNEASCVVFGMPREAINMGGVSEVVDLSQVS
                     QQMLAKISAGQAIRI"
     gene            complement(71882..72748)
                     /gene="cheR"
                     /locus_tag="MOX77_000515"
     CDS             complement(71882..72748)
                     /gene="cheR"
                     /locus_tag="MOX77_000515"
                     /EC_number="2.1.1.80"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-glutamate O-methyltransferase CheR"
                     /protein_id="HCA3356167.1"
                     /translation="MTSSLPSGQTSVLLQMTQRLALSDAHFRRICQLIYQRAGIVLAD
                     HKRDMVYNRLVRRLRALGLDDFGRYLSMLEANQNSVEWQAFINALTTNLTAFFREAHH
                     FPILAEHARRRHGEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVL
                     EKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGLVRVRQQLANYVEFSSVNLLEKQY
                     NVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAGHSENFSNLVREFSLR
                     GQTVYALSKDKA"
BASE COUNT        17515 a        19530 c        17922 g        18078 t
ORIGIN      
        1 actggcgccg cgctggtagc gctgatgttg aaccagtttg gcgatagcgg tacgcatctt
       61 tcgctgctcg cggcggcgat cctggcgact ctcgcggcgg tggtgagcgg tttacgtatt
      121 acgcaaccac gcgttcaggc gtaaaaaaag cgcgtcattc gacgcgcttt tcatacttgc
      181 cagtgggctt attatttcag gtactcgccg ctacgcagcg cttcaatgcg tttatccagc
      241 ggtgggtgcg tcataaacag ctcgcttaac gatttcgatt taccgttaat acaaaacgcc
      301 atcatgctgg tcgcttcttg cggctcgtag ctggttttca ggcgctgcaa cgcggcaatc
      361 attttttcac ggcccaccag cttcgccgat cccgcatcgg catgaaactc acggtaacgg
      421 gagaaccaca tggtgataat gcttgccaga ataccgaaga ccagttccag caccgtcgca
      481 acggcgaaat agattagcgg attaccgtta cttccttcgc cttcatcacg gttgccgccc
      541 agaaaaccag cagcaatttg cgcgataatg cgcgaaataa agataacgaa ggtgttaacc
      601 accccctgaa tcaacgtcat cgtcaccata tcgccattgg caatatggct gatttcatgc
      661 gcaatgacgg cttccgcctc gtcagggctc atattttgca acagaccggt gctcacagcg
      721 accaatgagg cgtcacggcg tgcgcccgtc gcaaacgcgt taatgtccgg cgcatggtag
      781 atagcaacct gcggcatggc gataccagcc tggcgcgctt gcgttgctac ggtgttcatc
      841 aaccagcgtt ctctttcatt gcgaggctgt tcaataactt cccctcctac ggattttaac
      901 gccatccatt tggacatcag caatgaaata aaagaaccgc caaaaccaaa cagcagcgcc
      961 atgatcagca agccttgcac gctgctcgac tgtatccctg tcaggctcag aaccagcccg
     1021 aaaacgacca tcacggccag gttcgtcagc aggaagagcg cgattcgcat cataattttc
     1081 ttttaacctc aatttaacaa agcgcactat gcgattaccc acatcgtatg ggtcttatgg
     1141 ctattttcaa gtatcaccag gcggtaagtc acgagaaaaa cacaacttta cattttgtag
     1201 cattatcctg acgacttctg cgcttgttaa aaaaaacagg cacaattttt tgtgcctgtt
     1261 tagcgttact tatcggttgc cgcttgctcc gctggttttt ctttttcaag atgcgccagg
     1321 tccagagcaa tcttcaccgt ttcatcaagg tacgggtccg gctcctggta atcctttggc
     1381 agatcgtcca gtttcttcaa caacggttta ccctcacgtt taaaccgatc gttaatacgc
     1441 gccagacgca gagcgtcttc ttcattgttc tctttctcac gctgcgcata attcagagag
     1501 acgatgttgc gcttatcctt catggcattg aaacgtgcga tatccttcat gatgtactga
     1561 aactcaggat ctttggcgat acgcgcgttg tgctctttca ataattccgg gccaaacggg
     1621 gccaaatcgt ccgatttcac gtatttcgcc gcatcaatgc tatcccacgg caaggcgtta
     1681 tcttcaaatt tttctccggt ttccgtctct tcattgccag tcggcatgat gatatccggc
     1741 gtgacccctt tacgctgcgt actaccgccg ttgacacggt aaaacttctg aatggtgtac
     1801 tgcaccgaac ccagcgcagg ccattccggg cggagcatct gatcgtaaat tcggtttagc
     1861 gaacgatatt gctgtaccgt ccctttaccg aaggtcggct caccgacaat cagcgcgcga
     1921 ccataatcct gcatcgcggc agcgaagatt tccgatgccg aagcactgaa acgatcgacc
     1981 agcaccacca gcgggccttt gtagtagacc acgccgtcgg tgtcgctatc ctcacgcact
     2041 ttaccgttat tgtcgcgcac ctgaactatc ggaccagaag ggataaacag gccggaaagc
     2101 gaaacggctt ccgtcagcgc cccaccgccg tttgaacgca gattgataac gatgctgtta
     2161 acattctgtt tttccagctt ctgaagctga actttgacat catcggtcaa gccaacatag
     2221 aagcctggaa tatccagtac gccaactttt tccttgccga tggttttcac cgacatttta
     2281 accgcgcgat cttcaagacg aatccgttca cgcgtcagcg tgataatacg cgttttcgtc
     2341 cctttgccag ccggcagtat ttccagtcgg accttgctgc ctttcggccc tttgatcagc
     2401 gccaccacat cgtcaagacg ccagccaatg acgtcgacca tcggttttcc ggcctgccct
     2461 acgccgacga tacgatcgcc gacgctaatc gacttgctct tcgctgccgg gccaccggcg
     2521 accaatgagt taatgacagt gtaatcgtca tccatttgca gcaccgcgcc gataccttcc
     2581 agagacaggc tcatttcggt attaaactgc tcggtattgc ggggagaaag ataattcgta
     2641 tgcgggtcga tttcacgcgc aaaagcggtc atcgccagcg agaacacatc ttcactgttg
     2701 gtctgcgcca ggcggcgaat agcgaatttg tagcgacgcg tcagcgtttc gcgaatttct
     2761 ttgtcgctct tgccggtgag tttcagactg agctcatcga atttcacttt accatcccac
     2821 agcgcattta gctcagcctc atctttcggc cagggcgctt tactgcggtc caggttaaac
     2881 gtatcgtttc cggtgaaatc cattggccgt tccagcactt ttagcgcgta ctggtaacgt
     2941 tcaaaccggc gcttttgcgc caggttataa agatcgtaaa aaacatccag cttacccgtg
     3001 cgcagctcat cgcccaacac ggttttcttt ttcgcaaact gctcgacatc gctcgccaac
     3061 aaaacgttgt ggctatagtc gagaagattc agatagcgat caaaaatctt tgccgaaaat
     3121 gcctcatcca gatcgaactg gcgatagtgg gagcgggtaa aacgcgacgt tacgcgctcg
     3181 ctcaccgtcg catgttgcgt ctcttccttt agtacgggaa tttgatcggc acgcgtaata
     3241 tcttccacgg cgaaggactg gcctgctaat gcaagcaggc cagctaacgc ggtaagccta
     3301 aaaaaagtgt tcatgccagg cctggcctcc gtttcagaac accaggtgtt ctgcgcgtac
     3361 aatcaaagac atacccgaat tcagctgtac acggacacca tctttggtaa tttctaatac
     3421 ggtggcatcc atcgcattat tacccgcttt caccttgagg gactgcccta cggtcaatac
     3481 tgaaatatca gaaaccggcg tgtgcttctc ttcgcgaggc gcacgcggcg ctttcgtcgt
     3541 cggtttatca gcgcgaggtt tacgttcagc gccttcttta cgacgcgcta ccgggcgagg
     3601 tttacgctcg cgtcgcggcg cgtcttcttt ttcgccagcc gccgcggcag cttcgcgttt
     3661 tttcgcttgc tgctctgcgc gctgcgcctg aacacgggct ttggcttctt caagctgctt
     3721 acgcgcatgt tcgacatgct gttcttccag ctcgccgcac ggattgccat caaggtcgac
     3781 gcgcgttgcg cccggcttaa cgccgtacag gtaacgccag cttgaagtat aaagacgtaa
     3841 agcggaacga agttgcgttt tgctgaggtt catttcgccc ccaactcgct ctaccagatc
     3901 ctgaaaaata ccaattttca gcgggcgagc ttcgccttcc gcactaaaac agtgaggaaa
     3961 acgctcggcc agaaacgcga taacttcttt actgctattc aacttaggtt gattttccat
     4021 gaaatttcct gattacaacg gacgtagcca acaagcagca ggcatgaaca ggcgtcatta
     4081 taatgacgct atcagtaatt gctacgttat ccgttgatta tcctgcgacg ctcgcaaaga
     4141 attttttgta atccgtcgtt gcaagcacgg tttcaagctg tgcgaccagc gtacgcaggc
     4201 cgtgttcatc ttcttcggta aaacggccaa acgccgtgct atctatatcc agcacgccga
     4261 taatccgttc gccaaccgtg acaggcagca caatttcggc gttgctggcg gcatcacagg
     4321 caatatggcc gtcaaacgca tgaacatcat caatacgttg aaccttattc tgcgctaccg
     4381 ctgcgccgca cacgccgcga ccaaccggaa tccgcacaca ggcgattcgc ccctgaaacg
     4441 gccccaacac cagcgtatcg ccttcgagga gataaaatcc cgcccagttc acctcggtaa
     4501 gacgttcgaa cagtagcgcg ctggtattcg ccagcgtggc cagaaagctg gtttcacctg
     4561 ccattaacga ctgaaaatcg cggtttaacg ccgcgtatag ttctgttttg ctcattatat
     4621 aatcacttcg tggtcttact cctaaacaca ggctattaaa ataagcatta aatgcgttct
     4681 tgttcaagat tattcctgtc atgagttaag attacattat tctaacactt tgattcacga
     4741 tacatggctc tgaacacctc acacgtcacg ccaacaaaaa agctaacgat caggtcagtt
     4801 agcgaagcgc tgccgcgcag ccactaccag cgctgccctg aatgcgacat gctgttcagc
     4861 ttgccggaga tgagcgctca tcaaagcgct tattgtcctc gttgccaggc caaaattcgc
     4921 gatgggcgcg actggtcgct gacgcggctg accgcgatgg cagtaaccat gctgctattg
     4981 atgccgtttg cctggagtga accgctactc catatctacc tgttgggcgt acgcattgat
     5041 gccaatgtga tgcacggcat ctggcaaatg acgcagcagg gcgatccgtt aaccgccgca
     5101 atggtgctct tttgcgtggt gggcgcgccg cttattctgg ttttttcaat tgcttacctg
     5161 tggtttggca gccttctcgg catgaatctg cgtccagtcc tgctgatgct ggaaaaactg
     5221 aaagagtggg tgatgctgga catctatctg gtcggtattg gcgttgcctc tatcaaagtg
     5281 caggactatg cctttctgca gccgggcatt gggcttttag cgttcgtctc gttggtggtt
     5341 cttagcattc tgactatgat tcatctgaat gtggagcaac tatgggaacg attttatccg
     5401 cagcaccctg ctcaacgtgc ggacgaaaga ttgcgcgtct gtcttggctg ccactttagc
     5461 ggctatccgg atgcgaaagg acgctgcccg cgttgtcata ttccgctacg gttacgcaga
     5521 aaacagagca tacagaagtg ttgggcggcc ttgctggcgt ctattgtctt tttgctgccg
     5581 gcaaacctgc tgcctatctc ggtaatctac attaatggcg ggcgtcagga agatactatc
     5641 ctgtcgggca ttatgtcgct tgccagcagc aatatcgccg tcgccgccgt cgtttttatc
     5701 gccagtattt tggtgccgtt taccaaagtc atcgtgatgt ttacgctact gttgagtatc
     5761 cattttaaat gccaacaggg actgcggacg cgaattctgt tgctgcgtct ggtgacatgg
     5821 ataggccgct ggtcgatgct ggatcttttc gttatctcgt taaccatgtc tctgattaat
     5881 cgcgatcaga ttctggcttt tactatggga ccggctgcgt tttatttcgg cgcagcggta
     5941 attttgacta ttcttgcagt ggaatggctg gatagccgct tactttggga tgcacatgag
     6001 tcaggaaacg cccgcttcga agactgaagc gcaaattaaa accaaacgcc gtatttcacc
     6061 tttctggctg ctaccgctta tcgcgctaat gatcgcgggg tggctggtat gggatagcta
     6121 ccaggatcgc ggcaatagcg tgactatcga ttttatgtcg gcggacggta tcgtaccggg
     6181 ccgtactccc gtgcgttatc agggagtaga agtcggcacc gtggaagatg tcagtctgag
     6241 caaagatctg cgcaaaattg aagttcgcgt cagtatcaaa tcagatatgg aagatgcgtt
     6301 gcgcgaagag acgcaattct ggctggtgac gcccaaagcc tcgctggcgg gcgtttccgg
     6361 cctggatgcg ttggtcggcg ggaattacat cggtatgatg ccaggtaaag gcaagcccag
     6421 agatcatttc gtcgccctag atacacagcc taaataccgg cttagcaacg gcgatctgat
     6481 gattcatctc aatgcgccgg atctcggttc gcttaatagc ggttcactgg tctatttccg
     6541 taaaatccct gtcggacggg tgtatgacta ttcgattaac cctaacaaac agggcgtgac
     6601 gattgacgtt ctgattgagc gacggtttac cgatctggtg aaaaaaggca gccgtttttg
     6661 gaatgtctcc ggcattgacg ccgatctaag cctgagcggc gcgaaggtga aactggagag
     6721 cctcgcggcc ctggtcaatg gcgcgattgc gtttgactca ccggacaatt ccaaacccgc
     6781 cgcccaggat gacacgttcg gcttatataa agatttagcc cacagccaac gaggggtaat
     6841 cgttaaactt gagctgccca gcggagacgg tctgaaagcg gaatctacgc cgctaatgta
     6901 ccagggactg gaggtgggtg agctttctaa actgacgctc aaccctggcg gcaaagtcac
     6961 cggagagatg accgtcgatc ccagcgttgt tccgctgatg cgggaaaata cgcgtattga
     7021 gttacgcaat cccaaactgt cgctaagtga cgcgaatatc agttcgttgt taaccggaaa
     7081 aaccttcgag ctggtgccgg gcgacggcga accacgcagt gaatttgtgg tggtgccggg
     7141 tgaaaaagcc ctgctgcatg aggcgaatgc cttaaccctg acgctgacgg ccccggaaag
     7201 ttacggcatc gaaccgggcc agccgttaat tttacatggc gtaaaaattg gccaggtcat
     7261 tgagcgcaac ttatccagta aaggcgtgtc attcatcgtc gcgattgaac cgcagcaccg
     7321 ggatttggta cagggcgaca gtaaattcgt ggtcaacagc cgggtggatg tcaaagtcgg
     7381 ccttgacggc gtagagttcc tcggcgccag cgccagcgag tggattgacg gcggaattcg
     7441 tattttaccc ggtacgagcg ggaagatgaa atccacctac ccgctctatg ctaacctgga
     7501 aaaagcgctg gaaaatagcc tcagtgactt accgactacc accctgacgc tgacggccga
     7561 aacgttgccg gatgtccagg caggttccgt cgtgctgtat cgaaaatttg aagtaggcga
     7621 agtcatcacc gttcgcccac gcgccaatac ctttgacatc gacctgcata ttaagccgga
     7681 atatcgccac ctgttaacca gcaatagcgt gttctgggcg gaaggcggcg cgaaggtgca
     7741 acttaacggc agcggcctaa cggtacaggc ctcgccactc tcccgtgcgc tgaaaggggc
     7801 cattagtttt gataacctga gcggcgccag cgccagtcgg cgcaaaggcg ataaacgcat
     7861 tctttatgct tcagaaactt ccgcccgcgc ggtaggcgga caaattacgc tacacgcgtt
     7921 cgacgccgga aaattggcgg aggggatgcc cattcgttac ctcggtattg atatcggcca
     7981 gatccagacg ctggaattga tcaccgcacg taatgaagtg caggcaaaag ccgtacttta
     8041 tccggagtac gtgcaaacat ttgcccgcgc cgggacacgt ttttccgtta ttacgccaca
     8101 aatctccgcg gcgggcgtcg agcatctgga tacgattctc cagccctata ttaacgttga
     8161 gccaggacgc ggcgcggcgc ggcgcgactt tgaactgcag gaagccacga ttaccgactc
     8221 acgctatctg gatgggttaa gcatcgtcgt ggaggcgcca gaagcaggct cgcttaatat
     8281 tggcacaccc gtcctgtttc gcggtatcga agtgggaacc gtcaccggaa tgtccctggg
     8341 gtcgctctcc gatcgcgtga tgatcacctt gcgcatcagt aagcgttacc aatatctggt
     8401 gcgtaataac tccgtattct ggcttgcctc cggctatagt ctcgactttg gtctgacagg
     8461 cggcgtggtg aaaacgggga catttaatca attcatccgt ggcggtatcg ccttcgctac
     8521 tccaccaggt acgccgctgg cgccaaaagc gcaagccggt aagcatttcc tgttacaaga
     8581 gagcgaaccg aaagagtggc gtgaatgggg taccgctctg ccacgttaaa caccaggctc
     8641 cggcgtactc gcgccggagc gttttatgct acactgcgcg cctgtttttt tgccggcgat
     8701 acacctgtgg ctcaacacgc tgtctatttt cctgacgctt ttctgacgca aatgcgtgaa
     8761 gcaatgcctt ccacgctctc ttttgatgaa tttatttcgg cctgccaacg cccgttgcgc
     8821 cgcagtatac gcatcaatac gcttaaaata tccgtggctg atttccttgc cctaatcgcg
     8881 ccctacggct ggtcgctcac gccaattccg tggtgtcatg aaggattctg gatcgagcgc
     8941 gatgatgaag aggcattgcc gcttggcagt accgctgagc atttaagcgg cctgttttac
     9001 attcaggagg ccagttcgat gctgccggtc gcggccctgt tcgccgatga taatcatccg
     9061 cagcgggtca tggatatggc agcggcgcct ggctccaaaa ccacgcagat cgctgcccgc
     9121 atggggaacc gcggcgccat tctggccaac gaattttcgg ccagccgcgt caaagttctg
     9181 cacgctaata tcagccgatg tggaatcgcc aataccgcac tgacgcattt cgatggccgc
     9241 gtatttggcg ctgcgttacc ggagatgttt gacgctatcc tgctggatgc gccctgctct
     9301 ggcgaaggcg tagtacgtaa agatcctgat gcgctaaaaa actggtcgcc agaaagtaat
     9361 ctggatatcg cggcgacaca gcgggaactg ctcgacagcg cttttcatgc tttacgaccc
     9421 ggcggcacgc tggtctactc cacctgcacg ttaaatcgcc aggaaaacga agcggtctgc
     9481 ctctggctga aagagaccta cgccgacgcc gttgaatttt tgccgctggg tgatctgttt
     9541 cctgacgctg accgcgccct caccccggaa ggcttcctgc acgtcttccc gcaaatttac
     9601 gactgcgaag gattcttcgt cgcacgtctg cgtaaaatgt catcccttcc agccatgccc
     9661 gcgccggggt ataaagtggg ggcgtttcct tttacctccc tcaaaggccg cgaagcatta
     9721 aacgttaccc aggcggccaa cgccgtcgga ctgctatggg atgaaaatct ccatctttgg
     9781 cagcgtgaaa aagaggtctg gctgttcccg gcagagattg aatcactgat cggaaaagtc
     9841 cgtttttccc ggctcggcat taagctggcc gaaagtcata ataaaggcta tcgctggcaa
     9901 catgaggcga cgatagccct tgcctgcccg actcatgctc acgcgttcga actttctgtg
     9961 caagaggcgg aggagtggta tcgcggtcgg gatatttatc cgcaaacacc ccctgccgct
    10021 gatgatgtcc tggtgacgtt ccagcatcag ccacttggtc tggcaaaacg tatcggcgcc
    10081 agaataaaga acagttaccc gcgtgaactg gtgcgggatg gaaaactctt tactggtaat
    10141 agttaaaagg cgcacaaaaa aaccgcactt tttgactggc gcttttgcgt acgttgacta
    10201 cgctgaaaaa tggacggcta aactggtcgt accacaatta gcgtattaac ggagagcacg
    10261 atgatgaaaa ccagtgtgcg cattggcgct tttgaaatcg acgatgccga attacatggc
    10321 gaatcgccgg gggagcgaac gttaacaatc ccctgtaaat ccgatccgga tttatgtatg
    10381 caactggacg cctgggatgc cgaaaccagc gttcccgcca ttctcaacgg ggaacattcc
    10441 gttttgttcc gtaatcatta cgatcctaaa tctgatgcct gggtcatgcg tcttgcctga
    10501 ctcaaaaaga acccgtcgcc aggcgggtta tttattcttc cttttctcat ttcccccctg
    10561 cgctaacctc tcctacacta tcgtgtaaag tagttaacat tgaggatgta atgttcgcgc
    10621 tggtactttt tgtatgttac ctggatggag gatgcgagga tattgtcgtg gacatctacg
    10681 ataccgagca gcagtgtctt tattcgatgg acgatcaacg gattcgccat ggcggctgtt
    10741 ttccggtaga ggattttatc gacggcttct ggcgacctgc gcagcaatat agcgattttt
    10801 aaccctagtc gctgatgccg ctattgtatc cgcgctaacg tcaattgccc gccaaatacc
    10861 gcgcccgtat caatatagtg tatgttggcg aaatccatgc gccgacgcaa cggcgtatgg
    10921 ccaaaccaaa aatgatcggc tccgctaatc ccgccgcgct tatttatgag ccgttcgcgg
    10981 ctccagagaa cctgatgtaa gtcgaccttt ttttgccatt gataggttga cgctggataa
    11041 tctgcatgag cgatcacatg cgtgctatgg cggcagcgaa cttccagtat ccagggcagc
    11101 cgctgacaaa gaataaaaag cgcttcagct tgcgcagcgt gttcagccgt caggcgggta
    11161 aaccagtcgc caccattcat caaccacagc gtcgactgcg atgaggcccg cgcatccagc
    11221 gccatttgtt catgattgcc gcgaaccgcc gtcatccagg actcacgcag taaagccagg
    11281 caacccaggc tgtccgggcc tctatcaatg agatcgccca cagaaactaa caagtcttgt
    11341 tgcggatcaa attgacactc acgtaacctt ttcattaaca ttgaaaaaca gccgtgaata
    11401 tcgccgacca cccagacatg ccgccaattc tttgcctcta ttcgctgata aatctcttca
    11461 ggccgcatca tgtttttcct gtcgttcatt atccaagata gatataaaaa gatagcgtgt
    11521 gcagattttc ttgcttagta aacgtgctct gttgtaaata gcgaatttca tcagtagcga
    11581 gtaaatgctt tgttatcatc gcaataaaat ataactgact gcaccagggg agtgttatcc
    11641 cctggcgcag cgagctactc actatcacct gttcgcgttc aatattctcc ctccttaaaa
    11701 acatatcgga aacataaacc acatcacctc agcacacgat atagcacact ctttagcgga
    11761 gtgatcctca aggcaaacca gcgccaatgc aggtgtcgtt accgtggcga ccatcgcccc
    11821 cacaaacagg cgcagcacaa ttttttttaa aggtggcata acctctcctg acagttaaca
    11881 gaccattaat ccttatcgag acatcatccg tgcgcgggta tcatagactt aacaacacgc
    11941 agcgtttcaa aaaaagctgt ctggttatac cggcatttag agtaataaca attattttaa
    12001 gttttaagtg tatccatttg atttttatat taaaataaat atgacgacgt tttgttaaaa
    12061 gcgtcgccat aaaaatgaat atatagtttc agaaaatctg ctattaattc atacggttaa
    12121 tagcggtatt gtgtttgcta tcttcaggag gcattctgaa gatgcttatt cgcaatattt
    12181 tctatagtta actgaaattg ttgtggcgtc ggcatcgtcc ccttattaaa cagcggcgta
    12241 acctctttca taacgatttt ctcagcatac gctttaaaag acacctgctg attatgattt
    12301 ataaacatat gcggatattt aatgctcgct gcagcaatga gggggacgac aaaaggattc
    12361 gcccctgccc cacctggagt aaatacacca ttttttatct ccctaggtag ccccgcattc
    12421 tgcgcagcct ctcctatctc tttcagaaag ggggtaatac tgaccccttt actgatgagt
    12481 aatttacaac agtgatcttt attattactg tacacggctg ataatatggc ttcgcatgtc
    12541 tgacgagcat aggccggatc tttactcgca ttacctttga tatccaggct attgagcttt
    12601 tgcagcataa aatctttaac agttttactg gttaatactg ccctaccctc agaggcgctc
    12661 ccacgatgaa aatgggtagt cggtatgtct gtttgttgat gcaggctaaa acgatctgac
    12721 agactcgtcg acaggctgat aaagctattt ctaacggcag taatactttt tgcaaaaatg
    12781 tccttctccg ttgtttttct tttactggtt caacgtcact tctatggatt ctgtagtgct
    12841 gggtggatag tgttatgtta gtcacggtag ttctcctttt agataactat gcatagctac
    12901 actttgttta tatttcttgc tttcaaaaaa tagccacctt ctccacaacc atttttactc
    12961 attgatattt ataaatttta ttttcctgat ggattttgtt cttctgtcac ttagcctgtt
    13021 ttttttcggc gcaaggtgat cgacttttat cgaggaacat ttttatcggg acaatcctga
    13081 acaggcaaaa catcacttca attcaactgc tgcgtcacac aaaacattca tgaacattat
    13141 tatttatgct gatgttgtta cgattttgcc cccattcgca ggctggctac caattatcct
    13201 gccagcgagt tagccgcttt ttcaaaacct ataaagtcgc cacgccaaac ctctccgcca
    13261 ctgtaatcct tatctaaaaa tcaattaatt aactgatttt tatatattat gacttttcat
    13321 ggcgttcaga aaaactacaa atgaaatgga ttgactcatc tattagtggt caaaaaaacg
    13381 cgctacgaga aataatcagt aacaattgca acactattcc aatcataacg taaactatat
    13441 gataccagac gattattatt gcttttaggt agcatatctg tatagctgct tttaaacaac
    13501 aatactctaa cacaacattc aacattataa cttacaatag gttaacaaat ggaattacag
    13561 cttatgctta accacttttt cgagcgtgtc agaaaggatg caaatttcaa cgcatttcta
    13621 atcgatctgg aatataataa tatcgcttat tacatctatt ttgttgctac cggtaatgtg
    13681 aaaattatca ctcatgcagg ccatttcatt tctattaaaa gcaatagaaa gctgattaaa
    13741 gtcaattcaa caccaaatac gcaattaata aaattgactt cagctaaaca cttttcgggc
    13801 gagcattcct atgaaaaata ctgtaccgat ctggcaacgg caggcgtttt taaatggatt
    13861 gtggaattaa acaaaaaaac tcgacaatac tggtcgaaag acaaccaatt attatatata
    13921 gaaaatgtgg tcatgccgct ttaacaaacc tgggtaataa tagcgtcagt cgtgacatcc
    13981 ggcgtgttgc gactgcgggt tatccattta gagaccataa tgagagtctg actgcgagag
    14041 ttatcctgtg cagtccgacc gacgcagcaa cgtttgacac gatgctcgac aacagcatct
    14101 cctggtgcag gagaaatgat attcaaagcg atatcgacta aaagctcaaa atatttgcct
    14161 gctatttata ttctatctaa ttaatactct ccaggaagtg tggcataatt gcagaatctg
    14221 tcaggattcc gggagcatac cggagcgtaa tcgaaaaacc atctggagat gtatgagcaa
    14281 agatgaaatc agttatcaaa ttctttaccg gtactctctg gaaaaactat acagtactct
    14341 taccagaaga gtagataacg tgctgtcatt cgccctcgtt tttctcgggg tcggcgtcac
    14401 cataaacgtc gggagtccct ttattctggg gccaggcatt gtgggtatcg ccatactaaa
    14461 aagagtactc cgcttcggca cgcgctcaac acaggccgac cggcagtccc gcgcctggct
    14521 gaaacttttt aatactcagc accgctttcc ttcagataag acactgttcc ttgccttcac
    14581 atcgcttgag caagacgcga gcgaagtatg gtccatgctt attggtcctg ccatcgtcat
    14641 gactgagacc gccctcggaa aaacgcccat tgagccattg acggcgggtg aaaaactctg
    14701 tgcatttttg agtggcgcga cgaaatccca gccagcagct cgcaattgac ctgtcttcta
    14761 aacgtctgtg ccataccaca gagatttagt acaaaattaa ttaatggagc actaacgctg
    14821 tcagcaggtt tctctgagtg aaagattcgt attatacgca cagcccagtt tacagtttat
    14881 ataacagcgc tatatgtttt tgtatccgta ccatgccgcc tacaagcggc tgtctgagta
    14941 cctctagccg tgccaggggg tattagctca aatgtgagct gacatatcta tggcacagcg
    15001 ccaaacctaa tctgactgtc cgccctgcgc cagaagcgga cgctgaacat ggtgtgtaca
    15061 ggccaacaat acgatatatt ttaaagctac ctgattgcag ctttcataag gctatgggta
    15121 ttcaaatgta gcaaagctat aaatcaggct taattaaata atgcctttgc gaacctactt
    15181 taggaaagtc cggtagcgac atttgaagta tatgaccctg tttttcataa aaagggagag
    15241 cctggaagct aaaggtatct acaagtccat gaacacagcc tttccgcaaa ccttcttttt
    15301 cggccatctc cataagttga ctccccagac cgcggctcct tgcagattca cttacccaaa
    15361 gatagtcgat gcaaagccac ggaccttttc tgtcagcaat taatccgcct accatttcgc
    15421 cgctttcgtt tctgcagtag accccaagct gcccattttt actaaaatcg acgaactgag
    15481 cattgtagct tcttaatccg gctaatagtt cttctttatc aaattcagta acttgatgtg
    15541 taatttgaat gtccatacat atccaattga acaagtttgc atttggaata taacgttata
    15601 aataagttaa ttaaatgtat caatagaaag tttattttta ctcctgcggg gcaggtcacg
    15661 tccgctactc gcttaaagca aactgtcagt tggagtctga gctggtacaa ttaatgtgcc
    15721 actggttaga aatcagtaat acgattttat caggctgata ctctggcctg tcaggatttg
    15781 aggtatccac ccggtttacc agcccactgt atttggcacc agtggaaccc acttcccgat
    15841 ccaggatatc cagtatccac cgccgaacct ctttccccaa aagatatgtg caacctcaag
    15901 cgccttgtct ggatgatgac cacggtatga agtttgataa cgcgtggaat cagggcgttt
    15961 ggtacgctct ccgttcagca actggacgcc tttctcccca gcctttcagc gttgaagatt
    16021 tgccagcgct gggtgaagag tgtaggcgaa ttatgaaaat cacttctgcc gtttatactt
    16081 cgaaaaagac gttatcagaa aggtggttcg caagcgcgga gttattaaac ctttacttaa
    16141 cgaaatacgg tttaagttgc ttgaattgca gcagaaagaa aacgacggct tgatgatgct
    16201 ggacaaatta agcgagcatg gcatcaatgg actgatacgc cgtcaataaa aggaagggtg
    16261 catggacgat cccgtcacat caccaatcac aacagaagag cacaaaacaa catttcacag
    16321 cgtaaatgat aaaacacgat gccattttca atcaaaaaca tatgttcagg tccacaagga
    16381 cactacccag aaatctccag acctatacag aacaagccag taccgaggaa ttgcacactg
    16441 atctcaacaa catgcaaagt actggactat acagtattca gcaaatggtc ctgcagttat
    16501 gaaatgcgcc cacccggtgc agaagaaaga acctcacgac taaaattatc agcatcaggc
    16561 ggtcaccgaa cccgataata aaacggctca tcgccagcca ccagctctgg agcggtatac
    16621 tccatttttt gacgcatcct ttgatcgcca gataaataac ttttcgtact gagtcatccg
    16681 tcgggaacac cttgcatttc tttatcgcgg cacggatcac gctgttcagg gattcgactg
    16741 cgtttgtcgt gtagatggcc ttgcggatat ccggcggata actgaagagc gtattgaggt
    16801 tttcccggtg cgcacgccag cttttgctga tttgcggata tttatcgtcc cggactttcg
    16861 cgaacgcatc tatcgccatc agtaccgcat cttcggtcgg ggcctgatag accatcttcc
    16921 ggccgctggt gacggctttg tagtctttcc aggctacgta tttcaggctg ttacgcatca
    16981 tatggatact gcacagctga atatgggttt gcgggaagac gctatttatc gcatccggga
    17041 agcccttcag accatccaca caggcaatca ggatgtcctg aaggccccgg gttttcagct
    17101 ccgtcagcac gcttagccag aacttttcgc attcattttc ggccagccac atacccagta
    17161 actctttctg gcgttcggtg ttgataccca gtgccaggaa gacggctttg ttgattacgc
    17221 tgccattctg acggactttg acgacaacgc agtccatata aacaatgggg tacagcgcat
    17281 ccagttgccg gttttgcctc tcagtgacct gctcttttac ggcgtcggtg actttagata
    17341 tcagcgaagg tgacacatcg gcgtcgtaca tctctttgga ggtggcgacg atttcgcggg
    17401 tagtcatgcc tttggcgtag agggataaaa tttggctgtc catctgcgta atgcgcgtct
    17461 ggtgcttctt aagtagctgc ggttcgaagg tgttttcacg gtcacgcggc gtgttcagtt
    17521 cgatctcgcc gtcatcgcat aacaccgttt ttgacgagta gccattgcgg gtgtttgagc
    17581 ctgttttggg ggcgtttttc tcatacccgg ggtggtcagt cagctacgca ttgagcgccg
    17641 tttcgacggt taatttcgtc agcatacggg aaaacggatt gaggtcggct tcggttttaa
    17701 ggcctttagc cagttcagcc gcaaggaatt tgagtttctt ttcgtccata attgcctgtc
    17761 tccgttactg gagtgaacat atcaaaaaca ggcaattaca caattttaat tacagtctca
    17821 gttcagtcac attattgatg agcgactgta cgttaagcca atcaagaccg agatgaaaat
    17881 cgctctgcca ctttcgctca cccctccttc catgggttta cgcctcagta cggtgattga
    17941 tcgttgccgc ctggtaagcc gtagcgaata ccttatcagc gctggcatac gcaaaaaccg
    18001 cccgaacggg agtattcatc ctgacagcct gactaaaaaa tttgttgcgg cacgaaaatt
    18061 taccggaata aatttagtga taacccaccg acatttcacg agatccgcag cttatccgga
    18121 cgactatata aagatgctta cggggaaggg tttgctcaga aactcctggg acatacttcc
    18181 gagaacacca cgaaactcta tatcgacaaa cgcgataata aagcttacgt gatgctctga
    18241 ttttgctgta aaagaaatgt taaactggat ttggatctga tataacgaaa aagcccggaa
    18301 tacagaaatt ctggaaaatt tcggaaattt cggattattg atcataagca actgatttat
    18361 aagaaaaaca aaaagagacc gaatacgatt cctgtttacg gcaacaattg atctttccct
    18421 ttaaattcat aatgttacat attaattagg tgattttaac gattagaaca cgttattttt
    18481 gattctaata gattcaatta gttatcactt tttacgtttt aattcggacg tatttcgggc
    18541 cattttgcgt ataaatctcc cgaccaaaca aactcactgc ccaatacatc actcccctct
    18601 tccattgggg gactcccgat gccaaatacc catgtagacg aaggcttaat agtgatgcca
    18661 acaaaagcga tcgcgaaaag ttgaacaggt ggctagtttc agattaaaca cattggttag
    18721 tcatcctgaa caagtaaaat ccgccgcaac tggcagccat tcaatactcg cactatcgaa
    18781 cgatcgccag cttgccgcag cccgttcttg catacgatgt ggctgcggtt ccatcacatc
    18841 aggaatgtga aaatctggat aaacctgcca cttaacctga agcaggtctt catagcgggt
    18901 ggtataccga ggcgaaagca tttctcttaa ggtcgccata taaaaacatt ctattacaac
    18961 gagttatctc ctcctgcctc cgccccggcg caaagctata gtttttctat ctccttgtga
    19021 aacaaacaat tattcttgct atagcgctga ttaacaatcg ttcgcgggca acgtacattc
    19081 agcgagtttc agagcttcct gacggaattc cgccggtgct gtttccggga cttcttactg
    19141 gttgatacag atcctgcctc ttacttgaga atttactcat ttagccgtat gtccattatg
    19201 ggtggataag atcatttatc atcgtaaggg ttgaaagcga taagttaaac ttgtcctggc
    19261 tcaacaaggg aacccgacta atgatgagct cttcatcttc aaggcgtttt atgccttcca
    19321 gcaagaatag atattaaatc gacaactgct gccaggtctt gcaggcgcag tggacaatcg
    19381 tgtggtaaca gcctgagtca tttcttattt ttctcattca gcataactgc gtcttctgat
    19441 agagaaattt ttatctaaac atataaaaaa cacagtgaag aaaacgctac ttttttctag
    19501 ctaaaaagct aaattaattt ttttatggag aggatcttat gcgcaaggtg tcgatatcta
    19561 tattattcat gctagtttca ctgacctggg ggactacatg gttggctatg cgaattgccg
    19621 ttgaaactat ccctccagtg tttgcaaccg gaatgaggtt tatgtttgca gcaccttttt
    19681 taatcatcat tgcatggtta agaaaaaaaa acctgttgtt tcctcccgga caacgattat
    19741 tccagtttgt gatttgcatc ttttattttt ctattccttt ctcactaatg atttatggtg
    19801 aaacctatgt caactctggg cttgccgcca ttatctttgc gaatatgcct gtggccgttt
    19861 tgatagcatc ggttttgttt ctaaatgaaa aagcgaaact aatgcagatc gcgggcttaa
    19921 ctatcgcaat cactgcattg acggggatac ttcttgaaga aacgaataca agtacagaga
    19981 gtcactggca gggtatcact gcgcttattt ctgctgtgtt aatccatgcc ataatatata
    20041 cacaatgtaa gaaaagaagt tgtactgtct ctgttatcac atttaatgcg ctcccgtgcc
    20101 ttttagctgg gttgatactt tctgcgacag gatggttttt tgaaagacca caagtatcaa
    20161 ccttctcagt acactcaata ttagctaccc tgtatctcgg ggcttttgcc ggagtttttg
    20221 gtatcctgtg ctactttgcg cttcagcaaa aggctaacgc cttccaggct tcgcttgtat
    20281 ttcttatctt tccgctgatt gcggtaagtc tggaagacta tatttatgga tatgctattt
    20341 caacacactc aatgctgctt attataccat tagctatcgg gatatttctt actcttgtcg
    20401 ccagaaatat ccctgtaacc agcagatgtc gggataattc atcacagaaa taatcgattt
    20461 ataataacgc aaataattcc tgatgcctta ctgagctcca gctaatgcgg ggtggataag
    20521 ctggaataca gacccggtaa tacacagcga ttatattaac aagcaatgta ataaaggagt
    20581 tttttatgtt catgtttctg ccattcttgc ttgcactgag cgtggcaatg ggagccataa
    20641 acagaaagga taaagtcagc tacattctat gggccgtttt actcatcgtc actattttat
    20701 cattcatcca tcatatgacc aattcgctaa ctttgtcatt ttaaggagtg tgtatgaaaa
    20761 cgcatcatca tccaacaaca tttgttcatc tgattaatca gataggactc cttgggatat
    20821 gcgttgctct ggttgtagcc ttttattatc aactcgttag gcatgagctg ccttgtccaa
    20881 tttgcttatt acagcgggct ggcctcatca tcgccggttt tggcttttta tttaacctct
    20941 gctttggtct acgaggcata cattacggga tggtaattat tggcagtatc ctgaccggag
    21001 ttatggcatc ccggcaaata tgtttgcata tcatgcccgg tgacacagga tatggttctg
    21061 cattttttgg attacacttt tatacctgga ctctgattac gtcaattctc attattattg
    21121 ctgttgcggt agttctggca atcagtagca tgaatgctgc atttcgttca ttgaatatta
    21181 atccgaacct gttcagtatt gtcggttggg tatttctatt actgattact gccaacctta
    21241 tttcaactgt actggaatgt ggcggagggg aatgtgctgc taacccggtc acatataagc
    21301 tactgtcgaa gcaggatatt gcctttctga aaacaggcct cctgacgagg acagttctcc
    21361 ggttatgacg cacttttaaa atgactgatt ggtaaatata tagcaagcac ctgtcttgta
    21421 gaaactggaa tggttatggg ctaacacgga agtttcagta acgttgaaat ggtgcaataa
    21481 taggaatcaa acttataacc ttcgcattac gaattagtag aatcacattt aactaactaa
    21541 aagcatgttg accagactcg cagaccattg aatcacgcaa caaccagtta ctgtcatctg
    21601 atgaaaaagg ctgtgcataa cagaatcagg actgactggc atcagggtca tgtgcttcag
    21661 cagcaaatac ataaaatgaa gcaagatata aagaatgaag gaaaaatcga gtatgaaaaa
    21721 cgtacagaat tgtctgaagt aacttccctg cagcattgac gccgcaggga atctatttat
    21781 ggtgtaacta tattgaacca gaactcaaac ttgtccatat agcccagcat ctcatccagt
    21841 ttcgcagcat taccggtaac gttgacttct cctttatctt gagcctgctt cagagtttct
    21901 tccttcagga taattttatt cagcgtgtca cggttcagag taatcgtggc atcagcgtct
    21961 ttcgcttcag cattagccgt gtggttcagc acgccatttt ccagctcaag cttgtacttt
    22021 ccgccgtcgc tgccaaggtc aatattaaac accgcccggg cattacccgc tttttcaccg
    22081 ttgatatgta cagccaggaa atcgaagaac atttcagggg tcattgcccg aacggtatcc
    22141 ggacttgctg tatttggcgt cggaccttta accacaccgt tacgcagctc ctgcgcaccg
    22201 gtcaggtaga agttacgcca tggaccagat tcagcctgat accccaattg ttccaacgca
    22261 tcggcttcaa ggttacgtgc attctggtta tttggatcgg caaacacgac cttactcacc
    22321 acctgagcaa cccaacggta gttcccctgg tcaaagtctg ctttggcttt ctgaagaatc
    22381 gcatcggcac cgcccatata ttcaacaaat ttcttagccg cttcttcggg tggcagctca
    22441 tcaagggttg ccggattgcc atcgaaccaa ccgagataca gcacatacgt tgcttttacg
    22501 tcatggctga tggagccgta atagccgcgg ttggcccagg tttttgccag gctatccggt
    22561 agtttgaagt tggccgctat ttcgtcgcga gtcagacctt cattggccat acgcagagtc
    22621 tggtcattga tataacgata caggtctcgc tggcttttca gcagaccaac aacattctcg
    22681 ttaccccaag tcggccagtg gtgctgggcc ataataattt cagctttgtc accccaacgc
    22741 actatagctt cgttgatata tttcgaccac ggcaacggct cacgaatttt tgcgccgcgt
    22801 agcgagtaag tgttatgcag ggtgtgagtg acgtcctctg cggcttcgat gagtttcttc
    22861 tcttcgatga accacagcat ttccgaaggg gcttccgaac caggggccag cataaagtcg
    22921 taagtcaggc catcaatcac ttctttctgg ccgtctttat caatgatatt agtgggcgca
    22981 atcagtgtca ccgtccccgc agaggtggtc gtccccagtc cggcgccaac ctggccggag
    23041 gcatctggtt tcaggaggtt gccatacata tagctggcac ggcggctcat cacgttgccg
    23101 gccataatat tctcggctac tgctgcctcc ataaagccag caggcgcata cactttcacc
    23161 ttgccggatt tcacgtccgc ttcatcgaca acgccacgca caccaccata gtggtcaaca
    23221 tggctatgag tataaatgat ggcgacaaca ggcttattgc cacggttttt gaaatacaaa
    23281 tccataccgg ctttggctgt ttccgcagaa accagcggat cgacaaccgt aatcccctct
    23341 ttaccttcga taatcgtcat gttggataaa tcaaggttac gaatctggta gacgccgtct
    23401 gttacttcaa acaagccact gatattgatt agttgggact gacgccacag actagggtta
    23461 acagtgtcag gagatttttc cccttctttt atgaaagcgt actgctgtgg attccagatg
    23521 acattccctt gctctccctt aatcacctct gcaggtaaat cagcaataaa gcctttatgg
    23581 gcattcgtga aatcggtgtt atcagagaaa ggaagttggt tataaagcgc attgttagct
    23641 tgcttggttg aagcagtggc accttttggg gcttcctggg caaataaagg tgtcagcgca
    23701 gtggaagaga gtagccccgc cagcgcaaaa cttttaacga tcgacttaag tctcatttgt
    23761 acccctcatg taaaaatatt ctgtatcact cagtctggtc gattaattat ctgttaattc
    23821 aaacaattaa agttattgct gaccattttc gctcttttaa atataaccaa aacgttacat
    23881 ttcgctattt atggatacaa ataagtcgtg ttttacgtct gccagttaca tcctctttta
    23941 gtaagtgggg taaactcgct tccagtttcc gggaaacact ataattctcc cccctactac
    24001 aggaattgtg actataagtt cgtcactgtg gagcaaaaat catctcatca gccaaaaatg
    24061 cagcctggcc tgatagcttt tccatttttc accatgaagt atctccgcac tacactggat
    24121 agtaattatt cattatatga ggcgattaag gatggggcag gattcggacg acaggcgccg
    24181 tacctccagt gctggaaggg tatggcagga tcataaagat atggtcaggc aagcgctacg
    24241 tgtaagtatt ccgtggttca catttgtgaa tatcagcttt gcgcttatca ttttatttcg
    24301 ccacatactc atcagtgact ttgacaagtc gatcagtgca cagactggaa tactgccttt
    24361 aatagacgat attatgggca gtattattgt tttttcgttc ctgatactcc ttttcattta
    24421 ccgccttccg gccagattta ctcctctttg tctggtgatg ctgctgattc tcagtctgat
    24481 gtggagctat tgtagctact gttttattgt ctggtggcaa ctgccttttg cctggcctct
    24541 cagtgtcatc cttatgctta ccgcgctggc tgcgctttat tatcatctgc cagcgttgct
    24601 acttttcatc gtcccgttat ggctgaccgc cctactggcc agcgtgcagc ttaaccagta
    24661 tgtgaatatc cggtttttat tagtctggct tactcttacc gccatactca tttatggtcg
    24721 ctttatcctg cagcgctggt ttgatgaagc ctggttgcgt taccaggaaa accggatgct
    24781 tatcgcgcgt ctcgacgtta tggctcacca ggatgcactg accgggaccg ctaatcgacg
    24841 ttcaatggaa agttttcttg gggatgctct ccgccagacg gagccgtttg cactgatcat
    24901 gctcgatgtg gactatttca aaaactataa cgacaattat ggtcaccagg ctggcgatgc
    24961 ctgtctggca aaggtggcct gtgtagtaaa gaggtcgatt cgtactccgg cagacctggt
    25021 ggcacgttac gggggcgagg agtttgtcgt tgtgctgcct tcgtcgtcgc tgaatgaagc
    25081 tgcactggtt gctaaacgta ttcagacaaa cctgcgtgaa accgcactgc cgcatgtagc
    25141 atctgcggta agcgaaacgg tcaccgtcag catgggcatc accctttcca cagccggtga
    25201 cactgttacc ggcattattg ccagagcgga tgaggccctt tatcgggcta aacaacaggg
    25261 acgtaatcgt tgggtaaagt aaaaccagtt gcccggtgtt tgatacagaa gatcaccttg
    25321 ccatactcag ataattaaaa ctgaatattt ggaagcaaaa aagacagtcg gactcacgga
    25381 acctttgcgc tggtacagcc tgaatatcag ataaaattat gtccagccgc agacaccagt
    25441 tgacagtgga atattcctgg tgttgtgaac aaggcgacat tcacaacacg actgtgctca
    25501 cggaattcaa atgccaaacg gatgattacg atattcgcta cctctgcaaa gttatattat
    25561 tcgattttca tgcagatttc gcctcccggt aatttccccg ataaaatgcc agtacccttt
    25621 gcatcgtcac gctgttccgg cactccgtac agataacgtt tctggtccgg tcgtaggaac
    25681 tcacgacacc ttccggcgtt ttcagaaagc gggtaatcct ggcatcttca cgtttctact
    25741 tccaaagcag gaaagcctgt tccgaaggaa aaataccgct tctcccggcc tgatacagat
    25801 ccccacaact ttccgccttt tccaggtagt gacgggctgt aaaaatggtt aaccctgtta
    25861 tcttccgaag ttctccaaac gtcatccgac cgtgtgttcg taccagttcc gtcaggcgct
    25921 tttgtatttc agctttctgc gccggtgtgt aatttctgct cataagtccc cccagttaaa
    25981 gccttcccgc cgccttacgc cgtctgaatt tttccatcat cagttgtgcc ggggttggcc
    26041 ctgccggatg acgcggcgct gcaagttgac ggcgtaccgg cggtatgcca caacggaaat
    26101 ccgaaaagtt ccggcgctgg gtgactgtga caccatgagt tttgtcagcg ccatcgttca
    26161 gtgttcccag cttgggctgg aacccggcgg cgcgctcggt catgcctatc tgctgccgtt
    26221 cggaaacaaa aacgaaaagt caggcaaaaa aacgttcagt taattattgg ctaccgggga
    26281 atgatcgacc ttgcccgccg ttccggacag attgccagcc tttccgcgcg cgttgtccgt
    26341 gaaggtgacg atttcagctt cgagtttggt ctggaagaga agctggtaca ccgtccgggt
    26401 gagaacgaag atgcacaggt tactcatgtc tatgccgttg cccgccttaa tcgatcgctg
    26461 ccgactggta agccgaactg atttcatgat cagtgccgga atcaggaaaa atagcccaac
    26521 cgggaatatt cacccggatg ggctgacaaa gaaatttgta aaagccagaa aaatttcagg
    26581 cgttaaatgt agtgataacc caccgacatt tcacaagatc cgtagcctgg ctggtcggct
    26641 gtacaaaaac gaacgcggcg aggaattcgc tcaaaaacta ctgggccaca cctcagagaa
    26701 caccacgaaa ctctatctcg atgaacgcga taataaagct tacgtgatgc tctgattttg
    26761 ttgtaaaaga aatgttaaac tgaatttgat tgtgatataa ccaaaaagac cggaatacag
    26821 aaattcgagg aaatttcgag ggaaaacaca taacccgttg atttataatc gaaataaaaa
    26881 gagaccgaat acgattcctg tattcggtcc agggaaatgg ctcttgggag agagccgtgc
    26941 gctaaaagtt ggcattaatg caggctaaat cgccttgctc tttaagaata gatgacgacg
    27001 ccaggttttc cagtttgtga cgaaggtgat tgaaaaaacc tggcgtattg tctgtcatca
    27061 gagataaaaa aaccgtaagc cttttcgtga aggtttacgg ttttttatta aaaatcagtc
    27121 agctattgga tggatcacaa agcttttgcg cacgttcgat aaacggcgcc agactcattt
    27181 tctcaccggg ctttgccggg ttatcgattt gaatgatggc aataggctga gcgcgcgttt
    27241 taccctccgc tacttgctgc tcggcaatag cattcaaggg atactgcacc agagtactgg
    27301 ggttgatcac atagagcgcc tggccaggcc gacaggtcaa catgacctct tcccgattaa
    27361 acgcccactt gtcttttcct acttcaaaac gacttacggt aatcacctgc ggcgccgcca
    27421 acgctacgcc cgaagtggcc agcagaagcg ccggaaggag tatttttttc attcgttatg
    27481 ccagtccatc agaaaggttc gagggttgca aacaggctga cgatcgccag aactatgcct
    27541 ccaactcccc attcaatttg cgtcatcctg acaaaccata ggtcagtccg gggattttcc
    27601 tgtcgcatac gtggtacgag aacataccga ttcgtcagcg caattgctac cataagcacc
    27661 accagcgcac attttaacaa aagcaactgt ccataagtgg tctgccagat agcggtaaat
    27721 cccgtgataa atagcgtgtt gccaatgcct gtgagcaata cgcccgccac aaaaaagtga
    27781 ccataacgag aaaaactcat catggcgcta atggcatgtt gacgccagcg tccttgagcc
    27841 atgcgcatac aataaaccac tggcaacagc ccgccaaacc aggctgcggc acagagcaaa
    27901 tgcagagcat ggttaatttg ctgtaatgtt cccgctacac catcgcgcat cgtcgcatgt
    27961 ccaacgcctg ccagcaggat aaactgagca acggttagaa taagaagccg tcgttgcatt
    28021 tttaccggcg caatgactac caccgccagc gtgaccagcg cgaggataat ttgccatatc
    28081 cagaccgcgc caaagcgggt ttgcagtacc gcgccccaaa ccgagacgga aaaaacatcg
    28141 ggccagccgc cgcccatcag tccgccctga attgccagca taaaagccgc gctgataacg
    28201 ctccaggcgg cggcatgtcg ttgcagatgt aaaaatcgac gcgtcattaa acgacgaatt
    28261 gatgcgggtg ccagccaggc gccgtaaagc gcgcagccgt agaccagcat caaactagca
    28321 aaatgaataa atcggagagt tatccagacg aatgtcagca tcatttattt cacgctgaag
    28381 gtgtatttcc cttttgtttt atgtccatcc accgacacaa cgtgccagtc taccgtgtaa
    28441 gcgccagatt ttaacggctg ctcaagcggg ataatcaact gcgttttatc ctgttcattt
    28501 cgctttgccg ggcgcgtttt gatggactct tgctgagggc cagtaatggt tgcgccgctg
    28561 aatcctggct caatcccttc aaaaaagttc agagtcagcg cctgtggcga ggccgtaacg
    28621 gcagcattcg ctgctggata ctgatgcgtc aggtgcgcat gtgcccaggc cgctggcgtc
    28681 gcaaatgtcg atgccagcag cagtaaagct aaacgtcgcg atggtgcaga agaagccata
    28741 ttcactattc ctttttgtta tacctacgtt acaaagaata accttcaaca atcaatgagt
    28801 cgaggatcat catttccatc ttgccattgc cgcggactct tagtaccttc tggcggcaac
    28861 aaaaaaggag acacgtatga aaacgaatct ggctcagctt gaacaagcgg aaatggataa
    28921 agtcaatgtg gatctggcgg cagctggggt ggcatttaaa gagcgctaca atatgccagt
    28981 tgtcgcggag gcggtcgaac gtgagcagcc agagcatcta cgcgcctggt ttcgcgagcg
    29041 gctgattgcc catcgtctgg cttccgtatc actatcccga ctcccttacg aacccaaagt
    29101 taaataaaaa ttatataacg ttacacttcc ttacatgcag acgactacat tataaggcga
    29161 ttcttaacct atgcttttta gaatggctgt agagactatg aaaaggaagt cattatgtcc
    29221 tcctggaaaa ttgccgctgc gcagtacgcg cccctgaacg cttcgccggc agagcatgtc
    29281 gcccatcatc tggaatatat tgagcttgcg gctcgtcaac agtgcgaact gctggtcttt
    29341 ccgtcactgt cgctattagg ctgcgacgaa agaaataaac cgttgcccgc cccgcctgac
    29401 gaggcgcttt tacagccgct cactcatgcg gccgataccc accatatgac tatcattgtg
    29461 ggtatgcctg ttgagcataa ctgccgcttc gtaaaaggca tcgctatttt tgccccatgg
    29521 ctaacgtcgc cgctcatgtt tcacaaaagt catggcgcct gtattgccag gcagcgaagc
    29581 gctatcaacg tggtggatga gcagccagaa ggtggtgata taggcccctc atttacgtta
    29641 ttcacaacca gtcaatgtct taacgagcct gaactccatg cttctacctc acgcttacaa
    29701 cgtttttcgc ataaatatgc gctggccgta ctgatggcca atgcctgtgg cagtagcgcg
    29761 ctgtgggatg aaagcgggca acttattgtt cgtgccgatt gcggttcgct attactgacg
    29821 ggtctgcgca caaccgaggg ttggcaaggc gatatcattc cattacgcta aggtctttgg
    29881 gtgaggaatg aatcatgttg cggattatag acacggaaac ctgcgggctg cagggcggga
    29941 tcgtagagat agcctctgta gatgtcattg atggcaacat tgtcaatccc atgagtcacc
    30001 tgatacgccc cgatcgccct attacgccgc aggcgatggc gatacaccgt attaccgaag
    30061 ccatggtcgc cgataagccg tggattgaag atgtcatacc gctttattac ggtagtgagt
    30121 ggtatgtcgc tcacaatgcc agtttcgaca gacgcgtatt acctgaattg ccgggtgagt
    30181 ggatctgtac catgaagttg tcgcgacgcc tgtggccggg aataaaatac agcaatatgg
    30241 cgctctataa atcgcgcaaa ctaagcgtac aaacgccgcc ggggctgcac catcaccggg
    30301 cgctttatga ttgctatatc accgccgcct tgctgattga tattatgcga accaccggct
    30361 ggaccgcgga agagatggtc aatatcacgg gccgtcctgc gctgttaacc actttcccgt
    30421 tcggtaaata ccgcggtaag gcggtatctg aagtcgcaaa acgcgatccg ggctatttac
    30481 gctggctttt taataacctt gataatatga gcccggaact tcgcctgacg cttaaacact
    30541 acctggaaga tgttcaggct ggcgagcaac gcagcaatgg aacaccacaa taacccgcga
    30601 cgctcacaag ccgttgcggg cgcgcgcgtc tatgcgctat gtaaggttcc ctgcgccagg
    30661 ccgattaaaa aggcgaactc cagcgcgacg ccttcgtagg atttaaaccg ccccgactta
    30721 ccaccgtgcc cggagtccat atccgtacat aacagcagca gacgttggtc cgtttttagc
    30781 tcgcgtaatt ttgccaccca cttcgccggt tcccagtatt gcacctggga atcgtgcaat
    30841 cctgtcgtca ccagcaggtg cggatagtcc tgcgctttga cattgtcata aggactatag
    30901 cttttcatat agtcataata ctcaatatcc tgcgggttcc cccactcttc aaactcccct
    30961 gtcgttaatg ggatcgactc atccagcatc gtggttaata catcaacaaa gggcacctgg
    31021 gcaataacgc cgtggaaaag ctcggggcgt tcgttgatag cgacgcccat tagcattccg
    31081 cccgcgctcc cgcccatccc ataacacagc gacggtgaac cgtaacccag ttttaataag
    31141 gcatcgcagg catcaagata gtcattaaaa gtattccgct ttttgaggaa tttgccatct
    31201 tcataccact gctgccccag ctcaccgccg ccgcgaacgt gtacgattgc gtaaacaaag
    31261 ccacgatcca gcaagctcag tcggctgctg ctgaagtcgg cgtcaatact ggaaccgtaa
    31321 gatccgtaac cgtaaaccag aagcggattt tgccctttac gaaaatactt ctgatgataa
    31381 accagcgata ccggcacttc gacgccgtcg cgtgcggtga tccacaggtg ttcgctctga
    31441 taacagccag aatcaaaccc aggcacttcc gtctgtttaa gtacccgtcg ttctccggta
    31501 tccatatcca gttcaaacaa ggtatctggc gtcgtcattg aagaatagcc gtaacgcagc
    31561 cgggaggtct caggttcggg attataggca agccacgtca cgtaagccgg atcgtcaaag
    31621 gcaatgccta tcacttcacg ggttttacgg ttaatttgcc gcaggctggt aagcccccgt
    31681 tgacgctctt cgaccactaa ccagtcggta aacagggtaa acccttccag cataatatgc
    31741 tcgcgcggag ggatcagctc ttcccaggcg ttttcattgc gcacgcgggt acggtacaac
    31801 ccaaagtttt taccgttccg gttagagcgc aggtaaaact tatgttgata gtgatcgaga
    31861 ctatattcat ggtctttgcg gcgcggtaag aatgaaaacg gctcggcatc ggccagttcc
    31921 gcgtcaagta atagcacttc gctagtggtg gcgctggcaa gatgaatcac cacataatgc
    31981 tgcgaagtgg ttttatgcag gctgacataa aaggtatcgt ctttctcctc atataccagt
    32041 tcatcttgcg atgacggagt gccaatcgtg tgccgccaaa cctgataggg cagcagcgtc
    32101 ttcttatgct tacgcacata gtaaagagtc agggaatcat tggcccagac aaattcaggc
    32161 gcaacgttat ccagcagttc cggataccag ttaccgcttt cgaggttacg aaaacgcaac
    32221 ccatactgac gacgggataa ataatcttct gccagcgcca tgatggtatt atccggcgta
    32281 atggcaagcc cgccgagcgt ataaaattcg ctgtgcgcgg cccgctggtt cgcatcgagc
    32341 aaggtttccc acacattcca ctcttcgctt aacgccgatt gtcgttgata gatggcatat
    32401 tcgcagccgg gttcatagat ataacggtag cgatagccgt ttttcacata cggagcggaa
    32461 acttctctgg gcgggatgcg atcgataatt tcttttagaa tgcggtcctg taacgcctgc
    32521 tgagaggaca tgaccttccg gccatactca ttttcctgat gcaggtaatc aaggacttcc
    32581 ggctgcgagc gagtgtcatc tcgcagccag taataattat caatgcgcgt atcgccatgt
    32641 acggtcatgg catagggaat tcgattggct tttggcaaca tgtcgttttt tcttttgcgt
    32701 taatatttgt tatatatcac gcggcaaaca cagcggctta gcatggtagt cccggtccgc
    32761 tcacctcggt aagcgcctga gatgtcactg cttcgccgct atcttgcaac atgaatgacg
    32821 taaactatcc atcctataag ggtggcaaaa gacacgcatg atgcaagcga aacatgttac
    32881 ttaatggcag gttatcagcc tggtagcgcc tgtttttgct gctgcaagtc ctgctcgata
    32941 ccgtcccgaa cctcctgagg aatttttagc gcgtctccta acgcattcag atagctacgt
    33001 tccataaagt ggtcaatatc aatggcggcg cagctcagga agtagatttc cagggcttct
    33061 tcttcattgc gaacgccctg tgccagacgt tgtggatcaa gcggctgctc aatagctttc
    33121 tcgataaaca cacgcccttg ctcttccaca cctgattctc gcagttggtg ctcaatcgcc
    33181 gcgcgttctt tggcatcaat atgcccatcg ctttttgcag caaaaaccag cgctaggatc
    33241 agtcgctcag tgcgaatatc cagcggcgta ctttggctgc cgaattgcgg ctccccctga
    33301 tgcgcagcgc gtactttatc tttgtactta ttccacaata cggaactcgc caccgcgccg
    33361 ccgcccacca gcaaagcgcc agtaccgtat ttggttaata atttgcgcga agacttattg
    33421 gcgaccaaca gtccagccag accgcccagc gcgccgggaa ccagcagttt atttaacccc
    33481 tgttcaccgg aaggcgatgc agaagcgcct ttttgcccaa gaagtgattg taattggttc
    33541 aaccagttag ccatagtacc cctcaaatac agaccaataa tggtcaagcg tacctgaggg
    33601 gatgtcagga attgtctgtt ccggcaaaag aagcgcaaat tacgctgcta gcggggctta
    33661 tattccgcct tgccggcttt gcaatcaacg atgacctgat aatggatatc ggcgctttta
    33721 ccgcgaacgg ttagcggaac ggtccattta tcattttgac ccacaacgtc ctgcacatta
    33781 acccacgcga ccgggtcagc ctgcccgacc tttttttggt cgtctgccca ccgcacgata
    33841 cgattttgct ggtagtcgcg cttcacgctt gccgcaatcc cggcggcatc cagcccttcg
    33901 cactgcggaa acttaaccga tttactctcg gtggatgccg caaatgccga tacgctggcg
    33961 gataacaaca gcaggctcaa caacgctcct cttttattca tacttttctc cttagcacaa
    34021 tgattcagga aaagcatggt acaaaacgcc gagagcgcaa gtgtgggttc aggcggcttg
    34081 ctttttcgtt ttactcgcgg cgtccttttc aaccgcctgc ggagaaggca acttaccggt
    34141 tttgaggatc gtgcttaaca cctctttatg ttccgccatc cacagcgaca acgcctcgcg
    34201 ctgcccatct tccagcacga ctggcgactg ctcaagccag gtatcaagaa gatcggcagt
    34261 atcgagcatt ttgtcccagg cgtcggcttc ctttttactg gtaaatgaca tcttctcctc
    34321 accctcgcga atgactacgt atttaacttc aaccgccatt ttgcagcccc ttatttacct
    34381 gtgtttatat acagtatatt gcaaggcggc aagaaaagca atttattcga aaagacatac
    34441 gcaaacgttt tcgtatatac tgcgcgcagg taaataaggg gacagaaata tgacgctatt
    34501 aggcactgcg ctacgtccgg cagcaacgcg ggtgatgtta ttaggggcag gtgaattggg
    34561 aaaagaggtg gcgattgaat gccaacgcct ggggatcgag gttatcgccg tcgatcgcta
    34621 tcctgatgct cccgccatgc atgtggctca ccgttcacac gtcattaata tgctggacgg
    34681 cgaggcgcta cgtcatgtga ttacagagga aaaaccgcat tatatcgtgc cggaaataga
    34741 agcgatcgcc accgatacgc tgcgcgagct ggagggcgaa gggctgaatg tcgtgccttg
    34801 cgcccgtgca acgcagctca cgatgaaccg cgaagggatc cgtcgcctgg ccgcagaaga
    34861 attaggtctg ccgacatcga cgtatcgctt tgccgacagt gaggccagtt ttcatgatgc
    34921 ggtagccgca gtgggttttc cttgcatcgt caaaccggtc atgagctctt ccggcaaagg
    34981 ccagagcttt atccgctcgg ccgaacagct cgcgcaggca tgggagtatg ctcaacaggg
    35041 cggacgcgct ggcgcgggtc gcgtgattgt ggaaggcgtg gttaaatttg attttgaaat
    35101 tacgctgctc accgttagcg ccgtcgatgg cgtgcatttc tgcgcgccgg tcggtcatcg
    35161 tcagcaagat ggtgactatc gcgaatcctg gcaaccacag cagatgagcg aactggcgct
    35221 gaagcgggcg caagagattg ctcgtcatgt ggtactggcg ttaggcggtc atggtctgtt
    35281 cggcgttgaa ctcttcgtct gtggcgatga agtcattttc agcgaagtct cccctcgccc
    35341 gcacgatacc ggaatggtca cgttgatttc tcaggatctt tctgagtttg cgctgcatgt
    35401 gcgcgccttt ctgggaatgc ccataggcgc tattcgccag tatggtcccg ctgcctcggc
    35461 cgtgattctg ccgcagctta ccagtcaaaa tgtgacgttt gatgatgtac acgcggcggt
    35521 aggggccgga gtgcaggtac ggctgtttgg taagcctgag atcgacggca cccgtcgtct
    35581 tggtgtagcg ttagcgacag gtgaaaacgt tgaagaagcg gtgataagag cgaaaaaggc
    35641 cgccagccgc gtgacggtaa aaggctaatg cgccatcgcc tgatggcgac gttagcgcat
    35701 ttttatcagg cctgcctgat cgccactcgt aagcccgata agcaagcgcc atcgggcatt
    35761 taacggctta ctgcttcgcg ccttctaccg cttcgcgcgc cagtttggtg atgcgatcgt
    35821 aatcacccgc ttccagcgcg tcggccggca ccagccagga accgccgatg cacaacacgc
    35881 ttttcagcgc cagatagtca cgatagtttg ccagagagat gccgccggtt gggcagaaac
    35941 gtacctgaga gaacggaccg gcaatcgcct gcaacgcttt agtgccgcca ttcgcttccg
    36001 ccgggaagaa tttgaactct ttcagaccat agtccatgcc caacatcagt tcagaaacgg
    36061 tgctaatacc gggaatcaat gggatagtgc ctgccgtcgc ggctttcagc agtggctcag
    36121 tcagtcccgg gctaatcgca aactgcgcgc ccgcctccgt cacctccgcc aactgctgcg
    36181 gattgagaac ggttccggcg ccgacaatcg cttccggcac gtctttagcg atagcgcgaa
    36241 tagcatccat cgcgcaggcc gtacgtaaag tcacttccag aacgcgaacg cccccggcca
    36301 ccagcgcttt agccatcggc accgcgtgct ccagtttatt gactacaatg accgggacaa
    36361 ccgggccggt ggtcaggatt gcttctgcac ttgttttcca gtttttcatc ggaattcttc
    36421 tctcgcctga ttactagtgt gtcatcttaa aaagtgatac aggttgcgcc ctgctccgca
    36481 cccgacagct tttcgcgcag cgcgccaaac aactcacgcc ccgttccgac gcgcgacgcg
    36541 ctcaggtccg gaatatgagg ctgacgagcg gcaagttccg cctcgtcgac cagcagagtt
    36601 aactcacctg tctgcccatt cacgcgaatg atgtcgccat cgcgcacttt tgccagtaag
    36661 ccgccatcgt aggcttccgg cgttacgtgg atagctgaag gcactttacc cgaagcgcct
    36721 gaaagtcgtc catcagtaac taacgcgatt ttgaaacggc ggtccaataa tacaccaagt
    36781 ggcggcatga gtttatgtaa ttctggcatt ccattcgctt ttggtccctg atgacgcacg
    36841 acaacgacac aatcccggtc aagcaggccc gcgtcaaacg caggcagcac atcatgctga
    36901 ctttcaaata ccatggcagg cgcttcaatg atctggtttt caaccggtac cgcagacgtc
    36961 ttcattactg cgcgccccag attaccgctt agcaccttag taccgccgtg aggagagaac
    37021 ggcttatcaa aagaggcaat gacatcgtta tccagtgacc tttccgcgcc ttcacgccag
    37081 tccagctcgc cgttgttgag ccagggctcc agcgtatagc gtttcaggcc gaagcctgcg
    37141 acagtattaa cgtcttcgtg cagcaatccg gcattgagca gctcacgcat caataccggt
    37201 acgccgcccg ccgcctggaa gtggttaatg tccgccggac cgttcgggta cagacgcgcc
    37261 atcaacggaa ccacttccga caaatccgag aagtcatccc agttgatcag aatgcccgcc
    37321 gcgcgcgcca ttgcaaccag atgcatggtg tggttggtgg aaccgccggt agccagcagc
    37381 gcgacaatgc cgttcaccac gactttttcg tcgatcattt taccgagcgg catccacgta
    37441 ttgccgttgc cggtaagacg tgttacctga cgtgcggcag cggcagtcaa tgcctcgcgc
    37501 agcggcgcat ccggatgcac aaacgaggaa cccggcaact gcattcccat aaactccacc
    37561 accatctggt tggtgttggc agtgccgtaa aatgtacagg tgcccggcgc atggtaagag
    37621 gcggcttccg actccagcag cgccattctg tctacttttc cttccgcata tagctgacga
    37681 atacggactt tttctttatt cggcaggccg ctcgccatcg ggcctgacgg aacaaaaatc
    37741 gcgggtaaat gaccaaaaga gagcgcggcc atcgccagcc ccggaacaat tttgtcgcat
    37801 acgccgagga ataacgcgcc gtcaaacata ttgtgagaaa ggcctactgc tgccgacatc
    37861 gctatcactt cgcggctgag taatgacaac tccatgccat cctgcccttg cgtaacgcca
    37921 tcgcacattg ccggtacgcc gcctgcgacc tgacctaccg cattcacgga atgcagggcc
    37981 tgacgaataa tctgcggata atgttcatac ggttgatgcg cagagagcat gtcattgtag
    38041 gaggtaatga tggcgatatt attgcgcaac atacttttca gcgaggcttt gtcctctggc
    38101 tgacaggcgg cgaagccatg cgccaggttg ccgcaggcca gttgagatcg gtggaccgtg
    38161 gcggttttcg cctgctcaat gcgggcaaga taggcttttc gggtctgctg cgagcgttcg
    38221 acaatgcgct gtgttacgcg taacaaatta ggattcatag aggctcctga aatttatctg
    38281 tccggctacc gggtttacca tgcgtttcat caatgtggaa agacagtgaa atacatgatg
    38341 tccggggata atggggcaaa atcgtttcag gcagtgtaat aaaaaaagcc tcgcaggtga
    38401 atccacacga ggcttaaaag tgcaaaaatg attctacaat ctgtgttaga tcatgttacc
    38461 ggtaaaatac cacctaagag tgagtggcaa atttactcaa actcattcca cgaacgaccg
    38521 tcacgggtaa tcatcgccac ggacgctacc ggtccccagg tgcccgcctg atacggcttc
    38581 ggcgcgtcgt tgtccatcgc ccatgcttcg gtaatggagt ccacccactt ccaggcttct
    38641 tccacttcgt cacggcggac aaacagcgcc tgaatgccac gcatcgtttc cagcagcagg
    38701 cgctcatatg catccgccag gtgcgtctga ttaaaggtct cggagtagct cagatcaagc
    38761 ttcgtgattt gcagattatg cttatgatcc agcctcggta ctttgttaag tacctgaata
    38821 tctacgcctt catccggctg caggcgaatc gtcaatttgt tctgcggcag gtcttgccag
    38881 gactctttaa agagattcag ttcaggcgtc ttgaaataaa ccacgacttc agagcactta
    38941 gttggcagac gcttgccggt gcgcagatag aatggcacgc ccgcccaacg ccagttatcg
    39001 atgtcgacgc ggatcgcgac gaaagtttcg gtgttgctgc ttttattcgc gccctcttct
    39061 tccagatagc ccggcacctt ttgaccctgc gcaaagcccg cggtgtattg accacgaacc
    39121 gttttttcac gcacgttgga gcgatcaata cggcgcaacg atttcaacac ttttactttt
    39181 tcatcgcgaa tactgtcggc gctcaggtca gacggcggtg acatggcaat catgcagaga
    39241 atttgcagca agtggttctg gatcatatcg cgcatctgac cggcctggtc aaaatatccc
    39301 cagcgccctt caatccccac ctcttccgct acggtaatct caacgtgatc gatagtgcgg
    39361 ttatcccagt tattaacgaa taacgagttg gcaaaacgca gcgccagcag gttgagaacc
    39421 gtttctttgc ccagatagtg gtcgatacga tatacttggc actcttcaaa gtattcgccg
    39481 acccgatcgt taatctcacg cgaggtcgcc agcgaagtac ccaacggttt ctccatcacg
    39541 acacgcgccg gtttggcgtt gagtttagcc tcccctaacc ctttgcaaat agcgccaaac
    39601 gtgctgggcg gcatcgcaaa atagttaatg gtggtgcggt ttttttgatc cagcatatcg
    39661 cccaggcgac tgaacgcagg cgtatcgtta acgtcaagat tacaaaaatc cagacggccg
    39721 ctcagcgtat cccacaagcc ttcatcaatt ttttccttca tgaaggtttc cagcgcctca
    39781 cgcacaacgt gggtataagc ttctttatcc cagtccgcgc gccccacccc aatgatccgg
    39841 gtatccggat ggatctggcc ggctttctca agctgataca gggaaggcag cagtttccgg
    39901 cgcgccaggt cgcctttcgc gccgaaaatg accaggtcac atgcctgggc tgtttgcgtt
    39961 accgccatgt cattctcctc agttaatctc ctggtacttt agccaggata tcgttgtaat
    40021 tttattacac agcactgtac tgcttttacg agattacgga aaccgtaaac gccttttcat
    40081 aggtgaaccg gcgtttgatt ggcaatataa tcggcaaaac gcctaataaa attgtcgctt
    40141 ttccacacaa gctggaactt aaaatccgac gtcggtcatg taatgaaaaa aaacgacacc
    40201 ttttttagcc attttgcccc ctttgacagc cgccaggagt aatatctaac aaaacgcgct
    40261 cggtttcgcg catcattgaa atcgctaata cccatgagcc ttgctaatca tgaatatgct
    40321 ggaaaaagtc cagtctcaac tggaacattt aagcaaatct gaacgaaaag tcgccgatgt
    40381 tattctggcc gccccaggca gatcgattca cttaagcatt gccatgctgg cccaggaagc
    40441 taacgttagc gagccaacgg tgaaccgttt ctgtcgcagc atgaataccc gcggctttcc
    40501 tgattttaaa ctgcatctgg cgcaaagtct ggcaaatggc accccctatg ttaatcgcaa
    40561 tgtggatgaa gatgacagcg ttgaggccta tacaggaaaa atcttcgagt ccgccatggc
    40621 cagtctcgac catgttcgtc agtcgctgga taaatcggcc gtcaaccgcg ccgtcgattt
    40681 actgacccag gcaaaaaaaa tcgccttttt tggtcttggt tcctccgccg cggtcgcgca
    40741 tgacgccatg aataagtttt ttcgcttcaa tgtgccggtg atttactccg acgatatcgt
    40801 gctgcaacgg atgagctgta tgaattgtaa cgatgatgac gtcgtcgtgc tcatttcgca
    40861 tactggcaga accaagagcc tggtggaact ggcgcagttg gcgcgggaaa acgatgcgat
    40921 ggtgatcgcc ctgacctccg ctggaacgcc gctggcgcgc gaagccacgc tggccattac
    40981 cctcgacgta ccggaagata cagacattta tatgcccatg gtctctcgac ttgctcaact
    41041 gaccgtgata gatgtgctgg caacgggatt tactttgcgt cgcggggcaa aattcagaga
    41101 taacttgaag cgtgtcaagg aagcgctcaa ggaatcgcgt tttgataaag aattactcat
    41161 caggagtgat gaccgctaaa agcaataaca atgttctacc cttttcgtca tccggggacg
    41221 ttcattttat accgttaagg tttcagaacg accggatcaa tgttcacgca acaccaagtt
    41281 gttttagtca acggagtatt acatgtccag aaggcttcgc agaaccaaaa tcgttaccac
    41341 gttaggcccg gcaactgacc gcgataacaa ccttgagaag gttatcgccg cgggcgcaaa
    41401 cgtagtacgt atgaacttct ctcacggctc gccggaagat cataaaatgc gtgctgataa
    41461 agtccgtgag attgccgcca aattggggcg tcatgtggct attttaggcg acctgcaagg
    41521 gccaaaaatt cgcgtttcca cttttaaaga aggcaaagtg ttcctcaata tcggggacaa
    41581 atttctgtta gacgctaacc tgggtaaagg cgaaggcgat aaagaaaaag tcggcattga
    41641 ttacaaaggg ttgccggcag acgtcgttcc tggcgatatc ctgctgcttg acgatggtcg
    41701 agtgcagttg aaagtgcttg aagtccaggg catgaaagtc tttaccgagg tcaccgtcgg
    41761 cggcccgctg tctaacaata aaggcattaa caagctcggc ggcgggcttt ctgctgaagc
    41821 gctgaccgaa aaagataaag ccgatattca aaccgctgcg ctgataggcg ttgactatct
    41881 ggcagtctcc ttcccgcgct gcggcgaaga tctgaactat gcacgccgcc tggcgcgcga
    41941 cgccggctgt gacgcgaaaa ttgtggctaa agtcgaacgc gccgaagcgg tatgcgatca
    42001 aaacgctatg gacgatatca ttctggcctc tgacgttgtg atggtcgcac gtggcaacct
    42061 gggcgttgaa atcggcgatc cggagctggt tggtatccag aaggcgctga ttcgccgtgc
    42121 gcgtcagcta aaccgcgcag tcatcaccgc aacgcagatg atggagtcga tgatcaccaa
    42181 cccgatgccg acccgtgcgg aagtgatgga cgtggcgaac gccgtcctgg atggcacgga
    42241 tgcagttatg ctgtctgccg aaaccgcagc cggtcagtat ccttctgaaa ccgttgccgc
    42301 aatggcgcgc gtctgtctgg gcgcagaaaa aatccccagc atcaatgtgt ctaaacaccg
    42361 tctcgacgtg cagttcgaca atgttgaaga agccattgcc atgtctgcga tgtatgcggc
    42421 aaaccatctg aaaggcgtta ccgcgatcat caccatgacg gaatccggtc gtaccgcgct
    42481 aatgacttcc cgtatcagct ccggcctgcc gattttcgcc atgtcgcgcc atgaacgcac
    42541 gctgaacctg accgcgctct accgcggagt aacgccggtg cattttgata gcgcggctga
    42601 tggcgttgtc gcggcgcatg aagctgttaa tctgctgcgc gataaagggt atctggtttc
    42661 cggtgacctg gttatcgtga cccagggcga tgtcatgagc accgtcggtt caaccaatac
    42721 cacgcgtatt ttgaccgttg agtaaagctc cccctggcct gctcatcagg taatacaggg
    42781 tttgtcagca taaagcctct cttacgagag gctttattta tttgatggga taaagatctt
    42841 tacgcttata cggctgaatc tcgcctggct tgcgggtttt gagcaacttc agaatccagg
    42901 tgtactgttc cggatgcggg ccgacaaaaa tttcgacctc ttcgttcatc cgtctggcga
    42961 tagtgtggtc gtcagccgtg agcagatcgt ccattggcgg acgaatctgg atagtcaggc
    43021 gatgcgtttt accattatac accgggaaaa gcggtatcac gcgtgcgcgg cacactttca
    43081 tcagccgacc aattgcaggc agcgttgctt tgtatgtcgc aaagaaatca acgaattcac
    43141 tatgctccgg gccatgatcc tggtccggca ggtagtaacc ccagtagccc tgacgaacag
    43201 actgaataaa gggtttaatc ccgtcattgc gcgcatgcaa acgtccgcca aaacgccgac
    43261 gcacggtatt ccagatatag tcaaaaaccg gattaccctg attatgaaac atcgccgcca
    43321 ttttttgccc ctgagaggcc atcagcatgg ctggaatgtc gacgccccag ccatgcggta
    43381 cgagaaaaat aactttttcg tcgttacgac gcatctcctc gataatctcc agaccttccc
    43441 agtcaacacg ctgttgaatt tttttcggac cgcgcatcgc cagctcagcc atcatcgcca
    43501 ttgcctgcgg cgcggtggcg aacatctcat cgacaatcgc ttcgcgttca gcttcgctac
    43561 gctgcggaaa gcacaatgac agattaatta gcgcccggcg acgagaactc ttccccagcc
    43621 gtccggcaaa acgccccagc gtcgccagca aagggtcgcg gaatgatgcc ggcgttaatg
    43681 cgatccccgc cattgccgca gcgcccaacc aggcgcccca atactgcgga tagcgaaagg
    43741 atttttcgaa ttcagggata tactcactat tatttttttt ggtttccatg cttttccagg
    43801 gtctgctgac gcgaaaagga attgtgaata gtgtagcgat gtctgcgccg cacacaaaac
    43861 aaaacagccg gcacacatcg cgtaccggct ctgtcaacgc atttgttaat cgaagcgcag
    43921 ttgcggcaga atctctttca cctgtgccag gtattcacga cgatctgacc ccgtcagacc
    43981 ttccgtgcgc ggcaattttg ctgtcagagg gttaacggct tgctggttga tccatacctc
    44041 ataatgcaga tgcggccctg tggaacgccc ggtgttacca gaaagcgcaa tacgatcgcc
    44101 acgtttcact ttttgccccg gtttcaccag cagcttacgc aagtgcatgt aacgtgtggt
    44161 gtaggtgcgt ccatgacgaa tcgcaatgta gtaaccggca gcgccgctac gtttagcaac
    44221 cacgacctcg ccatccccca ccgacagcac cggcgtaccc tgcggcatcg caaagtcaac
    44281 gccacgatgc ggcgcaacgc gtccggtaac cgggttcaga cgacgcggat tgaagttgga
    44341 ggagatgcgg aactgtttgg cggtcgggaa gcgtaaaaag cctttcgcca ggccaacacc
    44401 gttacggtca tagaatttac cgtcagcggc gcgaatggcg tagtaatctt taccatcgga
    44461 acgcatacgc acgcccaaca actgactctg ttcacgcttg ccatccagca tctcacgcga
    44521 catcagaacc gaaaattcat cgcccttttt cagcttccga aaatccatct gccactgcat
    44581 tgcttttatc actgcgctga tttcgctgct ggttaaacca gcctctttcg cgctggcgac
    44641 aaagctgccc cctaccgtgc ctttcagcag actgttgacc cagtccccct gctgcatttc
    44701 actgctcatt ttaaaaccgt tggcagtgcg atcgtaggta cgcgtttcac ggcgggagac
    44761 ttcccatgtc agacgctgta aatcgccatc ggcggtcagt gtccaggaaa gctgttggcc
    44821 aattttcaga ttgcgcagct ccttatcaga agcggcaagt cggctaatat cgctcatatc
    44881 gatgccgtac tgattcagaa tactgcttaa cgtatcgcct gtggagacga cgtattcatg
    44941 gacgccgact tcgcctgcgg ttttatcgtc cagctcatcc tgaggaatag cttcatcttc
    45001 ctgcgcggcc tgatcgatgg gttcgctggc ctccggtaag agggaacgaa tctcgctttt
    45061 ctccagttca atagttttaa cgattggtgc ggattctggg tggtaaacat agggccgcca
    45121 tacggcgacg gccagtgtca gaacggtaag tgaccccagc ataacgcggt ggggtcgggg
    45181 cagattatta aatgccaggg cgacagagcc ggctatctgt tgcacgtatt cacttcctcg
    45241 ttaatctcct ttcaggcagc tcgcatactg gttggctaat tggcttaaaa acgctgaata
    45301 gcttgtttta cccagtttaa tgttcgtccc gagggggtcc agtgttccca ttcgaacgga
    45361 tgtccctctc gccacggctt ccacgaccgc tggcctgaat tgtggctcag caaaaacgca
    45421 ggttgctttt tgctcaacca actgtgttct tatttcatgt aaacgctgcg cgccaggttg
    45481 tatctcaggg ttcacggtaa agtgaccgag tggggtgagt ccgtagtgtt tttcgtagta
    45541 accgtaggcg tcatgaaaaa cgaaataccc tttccccttg agcggcgcga gctcgttacc
    45601 gacctgttta tcggttgcgg ctaattgtgc ctcaaaatcc ttcaggttgg cgtcgagttt
    45661 agctcgactt tgcggcataa gttccactaa tttttcatgg attgcaaccg ctgtagcccg
    45721 cgctatctct ggggagagcc aaagatgcat gttatattcg ccgtgatggt gatgtacgtc
    45781 acctttttcc tcatcggcgc ccgtatgcgc atgttcatcc tcatcatcat ccgcgccctt
    45841 catgagtaac ggttttacat cggcaagttg cgcaatggta acctgcttat tatcagggat
    45901 attcctgacc gacttctcca taaaggcttc catttccggg ccaacccaga cgactaagtc
    45961 cgcgccctgt aagcgtttta cgtctgatgg acgcaatgaa taatcatgct cggatgcccc
    46021 atccggaagt aatacttgcg tatccgtaac gccatcagca atggcggaag caataaaccc
    46081 aagcggttta agcgaagcga caacggcggc gtcggcagcc tgggttgcac tcccccaaag
    46141 cgcggcggat aatgctgcga aaagaagcgt atttttctgt aacataatgc gactaatcat
    46201 cgtaatgaat atgtgaaatg tgatattata acattctatc acttctgcaa gcctaaaatt
    46261 aacatgacaa gtttagtttc actggaaaac gtctcggtct catttggtca acgccgcgtc
    46321 ctctctgacg tgtcgcttga attgagcccc ggaaaaattt taacgcttct cggccctaac
    46381 ggtgcgggga agtcaacgct tgtacgcgtg gttttaggac tggtagcccc tgatgaaggg
    46441 gtgatcaagc gcaacgggca actccgtatc ggctatgtcc cgcaaaagct ctatctcgat
    46501 accacgcttc cgctgacggt aaaccgattt ttacgtttac gtccctgcac gcaaaaaacg
    46561 gatattctcc cggcgcttaa acgcgttcag gccggacatt tgattgacgc gcccatgcaa
    46621 aaactctccg gcggtgagac acagcgcgta ctgctggccc gtgctctgct taacaggccg
    46681 cagttgctgg tacttgatga gccgacgcaa ggcgtggatg tcaacggcca ggtcgcgtta
    46741 tacgacctta tcgatcagct gcgccgtgaa ctcgattgcg ccgttctgat ggtgtcgcat
    46801 gatctacatc tggtcatggc aaaaacggat gaagtgttat gcctgaacca tcatatttgc
    46861 tgttccggcg cgccggaagt ggtgtctatg catccggaat ttatctctat gtttggcccg
    46921 cgtggcgcgg agcaattagg gatttatcgc catcatcata atcatcgcca cgatttacag
    46981 ggtcgtattg tactgcgccg gggaaatggt cactcatgat tgaattatta ctgcccggct
    47041 ggctggccgg gatgatgctg gcctgcgctg ctggtccgtt gggctcattt gtggtctggc
    47101 gtcggatgtc ctattttggc gatacgctgg ctcacgcgtc gcttctgggc gtggcgtttg
    47161 gcctgttgct ggacgttaac cccttttatg cggtaatcgc cgttacgctg ctgctggcct
    47221 ccggtctggt atggctggag aaacgccctc acctcgcgat tgatacctta ctgggcatta
    47281 tggcacacag cgccttgtct ttaggactgg tcgtggtcag cctgatgtcc aacgtccgcg
    47341 ttgatttaat ggcttatctg tttggcgatt tgctggccgt gacgccggaa gatcttatct
    47401 cgatcgctat tggggtcgtt attgtgctgg ccattctctt ctggcagtgg cgcaacttgc
    47461 tgtcaatgac tatcagtccg gatcttgcct ttgtcgatgg cgtgaagtta cagcgcgtga
    47521 agctgctatt gatgctggta acggcgttaa ccattggcgt aacgatgaag tttgtcggag
    47581 cgctgattat cacctcgctg ctgattatcc ccgccgcaac cgcgcgtcgc tttgcccgta
    47641 cgccggagca gatggcgggc gtcgccgttg gtgtaggtat gatagcggtt acaggtggac
    47701 tgaccttctc agccttttat gataccccgg cagggccatc cgtagtgctg tgtgccgcgc
    47761 tgctgtttat cttcagtatg atgaaaaagc aggcaagcta agcgtgtgtt gcccggtggc
    47821 gctgcgctta ccgggcctac aaaatcgccc aggcctgatg agcgcagcga cttcaggcgt
    47881 taaggcatct ctggcggcgt aataccaaag tggttccagg cgcgcaccgt tgccatacgc
    47941 ccacgcggcg tgcgctgcaa aaagccttgc tgaatcagat acggctccag cacatcctca
    48001 atggtttcac gctcttcgcc aatcgccgcc gccagattat ccagtcccac cgggccaccg
    48061 aagaatttat caataaccgc cagcagtagc ttgcgatcca tataatcaaa cccttccgca
    48121 tcgacgttca gcatatccag cgcctgcgcg gcaatttccg ctgaaatagc cccgtcatgc
    48181 ttcacctcag caaaatcacg cacacgtctg agcaggcggt tggctatacg cggcgtaccg
    48241 cgcgcccgac gcgccacttc cagcgcgccg tcatcgctca tctcaagccc catgtgcctt
    48301 gcgctgcgcc cgacgatgtg ctgcagatcg ggcacctggt agaactccag gcgctgcaca
    48361 ataccaaaac ggtcacgtag cggggacgtt aacgacccgg cgcgcgtcgt cgcgccaatg
    48421 agcgtaaacg gcggcagatc gattttaatt gaacgtgcag ccggcccttc gccaatcata
    48481 atatccaact ggtaatcttc catcgccgga tagagtacct cttccaccac cggtgaaagc
    48541 cggtggatct catcaataaa cagcacatca tgcggttcaa gattggtgag catagccgcc
    48601 agatcgcctg ctttttccag caccgggccg gacgtggttc ggaggttgac gcccatttca
    48661 ttggcaacga tattcgccag agtcgtttta cctaaccctg gcgggccgaa aatcagcaag
    48721 tgatctaatg cgtcgccacg ccgttttgcc gcctgaataa agatctccat ctgggagcgc
    48781 acctgcggtt ggccgacata ttccgccaat aacttcgggc gaatggcgcg atcggcgacg
    48841 tcttctgcga tcgtggcgcc tgctgaaatc aggcgatctg cttctatcat cctttacctc
    48901 atagcgcggc gcgtaacgcg tcgcgaatca gtgtttcact gcttgcgtcc ggacgggcga
    48961 tcttacttac catccgactg gcttcttgcg gtttataacc cagcgccacc agcgcagcaa
    49021 ctgcttcttg ttctgcatct tccgaggttg ggctggccgg cgacgtcaat accagatcga
    49081 ccgctggcgt aaagagatcg ccatgtagcc ctttaaagcg gtctttcatt tcgacaatca
    49141 gcctttcggc ggttttcttg ccgatacccg gcagcttcac cagcgcaccc agctcttcgc
    49201 gctcaaccgc attcacaaac tgctgcgccg acatgccgga gaggatcgcc agcgccagct
    49261 taggcccgac gccattcgtt ttaattagct ctttaaatag cgtgcgctct tgcttattgt
    49321 taaatccgta cagcaactgc gcatcttcac gcaccacgaa gtgggtgaag acgattgcct
    49381 cctgcccggc ctccggcagc tcgtaaaagc aggtcatagg catatgtact tcatagccta
    49441 cgccccctgt ctccagcagc acgatcgggg gttgtttttc gagaataatg cctctgagtc
    49501 tgcctatcac atgacgctcc tgcgtaaagg gctgaaaaga taatgcacta tcataaaaaa
    49561 agactggatg tttatccaga tgaaaaacac ttatcccgat atttctgtac tccgacaacc
    49621 cgcgatagtt aacgacgggc acgctccccg ctgcgtacaa aataagtcgt acactcattg
    49681 acaacttttt gcgtcctacg cgaataactt tttgccaaca tgccgtggcg caagtttggt
    49741 agtcttcaat aatgagtatc ctgataacac taatactgta tccagtacga atgccaacag
    49801 cggaacatcg gtccccccaa aaaacagacc cgagaataga tttaataaaa ttaaccacta
    49861 gcgctgaatt taatcgcatg ttgttttatc gtcgcgcaca acatatttta attcaccatg
    49921 acacaataaa tattgtgcaa actcattttt catgccatcg aaattcacgg ctggtatccc
    49981 ttctgaataa ctataataaa tattcacata ctcttcacta ctaaaaagtg cctgtcgttt
    50041 tgctgctaac ccacggcctt ttgctgcaat atactggaag cagtggccgc tggcaccaca
    50101 gctccgccca tcatcaacaa tatatatatc ggcagcgtta aacaactgtt ccagccagca
    50161 ctggcgaatc gttccggccg cacaaaccaa aaataatgat gcgctaatca tccacccgga
    50221 tttttttacc gatgtcatag ccaggaaagc cataaagcac gctgcctgca tgcacaaaac
    50281 cagttcttta ttcccggcaa ccaaatgcca ctggttaaat actaaggcaa tgaaaactga
    50341 actcaatgtt gccaacagtc tggttctgaa ccgcctggca gggagaagta aaaataataa
    50401 tgaaatcgtc cctggcttta ataaaaaaac aacggtatta gcctctgcca tatcaatact
    50461 caaacaataa caaaaactaa taaacagatg aaagataata gcaacaaaaa tataagaaaa
    50521 ataaaacacc caacctattt tcattggttt atcatcaacc acgtcgtact ccctgtcaat
    50581 ataagagagc agataatgag aaatttacca ccttaattcc tccccagtta tatttgcgac
    50641 attaattcca acaaatgaaa tattcaccat acatatttcg atgacactaa ggcttgtcat
    50701 ttatctggta taatgctaac taccctgtag aataaataaa aggaatttat ttcaaataat
    50761 ggaatgcaga gatgaaaaaa cattatcctg tccaatatga aaccggggat atcgtcttta
    50821 cctgtatagg tgccgcgctt ttcggccaga tatccaccgc ttcacagtgc tggagcaacc
    50881 atgttgggat tattattggt cataatggtg atgactatct ggtggcggaa agtcgcgtcc
    50941 ccctctcaac cgtcaccacg ctgtcactgt ttatacaacg ttcagccgga caacgttacg
    51001 cggttcgtcg cctgtgcggc ggcctgacgg tcgagcagaa actcgccatc atggagcagg
    51061 ttcccgcccg gctgaataag ttttatcaca cggggtttaa atacgagtca tcgcgccagt
    51121 tctgctcgaa atttgtgttt gatatctata aagaagcatt gtgtattccg gtaggcgata
    51181 ttgagacatt cgaagaatta cttcacagca atcctgatgc gaaactcacc ttctggaaat
    51241 tctggttttt aggttcaatc ccgtgggatc gtaagacggt gacgcccgcc agcctgtggc
    51301 aacatcccaa tttagaatta attagcgcct gtggaattga aaaccctcaa cgcgaggctg
    51361 agggagaata atttagcgca accttccccg cgccagattg agtcggctct cgctcatttg
    51421 catcgcgttc tggctaacat ggcaatgcgt aatggcgata gccagcgcat ctgcggcgtc
    51481 tgcctgcggg ttagcgggga gcttcagcaa cgtacgaacc atatgctgta cctggctttt
    51541 ctccgcgcta ccaataccga cgacagtttg cttcacctga cgcgccgcgt attcaaacac
    51601 gggcagttcc tggttgaccg cggcgacaat cgctacgccg cgcgcctgtc ccagcttgag
    51661 ggctgaatcg gcattcttcg ccataaacac ttgttcgata gcaaaatagt ccggctggaa
    51721 ctgcgtgatg atttccgtca cgcctgcgta tatgagcttc aaacgagacg gcaaatcatc
    51781 gactttggta cgaatacatc cgctgcccag ataggtcagt tgtctgccta cctggcggat
    51841 aacgccataa ccggtaatac gcgagccggg gtcaataccg agaataatcg acacgctata
    51901 ccccctgccc gccggcgttt agcagcacca ttacagggtc gccgccacct catcagagat
    51961 ctcaccgtta tggtagactt cctgaacatc gtcacagtct tccagcatat cgataagacg
    52021 tagcagtttc ggcgcggttt ccgcatccat atccgctttg gttgacggga tcatggacac
    52081 ttcggcgctg tccgctttca gacccgccgc ttccagcgcg tcacgcactt tgcccatctc
    52141 ttcccaggca gtgtaaacat caatcgcgcc atcatcatag gtcacaacat cttccgcgcc
    52201 agcttccagt gcggcttcca tgatggtgtc ttcatcgcct ttctcaaagg agatgacccc
    52261 tttcttactg aacaggtacg ccactgagcc atcggtaccc agattaccgc cgcacttgct
    52321 gaaagcatga cgcacttccg ctacggtacg gttacggttg tcactcaaac actcaatcat
    52381 aatggccgtg ccgccaggac cataaccttc atagatgatg gtttccatgt tcgagtcttc
    52441 atcaccaccc acaccgcgag cgatggcacg gttcagagtg tcgcgggtca tgttgttggc
    52501 cagcgcttta tctacagccg cgcgcagacg cgggttggca tccggatcgc cgccgcccaa
    52561 tttagctgcc gttaccagtt cacgaataat tttagtgaag attttaccgc gcttggcatc
    52621 ttgcgcagct ttacgatgtc tggtgttggc ccatttacta tgacctgcca taaatatttc
    52681 ctcaaaaaaa gcgcgccttt tcaggcgacg ttaatgacaa actcttcaat cgcttgccgg
    52741 ttactccagg acttggtaag cgccgccgcg tcaggcgcat caagccactg gtacgttaga
    52801 tgttcagtga atatcacctg ccgctcatgc ggtaacgcaa ggcagaacca gaattctgta
    52861 ttgtgcatga cgcccggcgc atagcgatga cgtaaatgtg aaaaaatttc aaactccacc
    52921 gtacgttggc agtcgactaa ggtcagttgc tctgccgcaa catcaatcgt gacctcctct
    52981 ttgacttcac gcacggcggt ctgcaacgcg gtctcccctt cttctatgct gccagtcact
    53041 gactgccaaa aatccgggtc gtcgcgtcgc tgcaacatta gcacccgttt cgtatcctgc
    53101 gcgaaaataa ccaccaggac cgaaacgggg cgcttgtaca ctttatcctt cacgcgacct
    53161 cgttgttggc tgttgggtga cgccgcgcat tgatgagact cccccttgcg ggccgccgcg
    53221 atatcacgcg aatgatgtcg tgtacattgt tcatatcagt tattctcggc tttcttcaca
    53281 acctgaatcc ccaactccgt caacgctgcc tggttggcga aactcggcgc ttcagtcatc
    53341 agacacgcgg cggcggtcgt tttcgggaag gcgataacat cacgaatatt gtcggtgccg
    53401 gtcaacagca tggtcagacg gtccagacca aacgccaggc ccacgtgcgg cggcgtaccg
    53461 tatttcaacg catccaacag gaagccgaac ttctcgcgct gctcctgctc attgataccg
    53521 agaataccaa atacggtttg ctgcatttca ccgttgtgaa tacgcaccga accgccaccc
    53581 acttcatagc cgttaatcac catatcgtaa gcgttagcga cggcttcttc cggggcagtt
    53641 ttcagttcag acgccgtcat gtcacgcggg gcggtgaacg gatggtgcat cgcggtcaga
    53701 ccgccttcgc cgtcgtcttc gaacatcggg aagtcaatca cccacagcgg cgcccatttg
    53761 tcttcgtcgg tcaggctcag gtctttgccc agtttcagac gcagcgcgcc cagcgcatcg
    53821 gcaaccactt ttttgttatc tgcgccgaag aagatcatgt cgccgtcctg cgcgccggta
    53881 cgttcaagga tagcctcgac gatgtcggcg gtcaggaact tggccaccgg actgttaatc
    53941 ccgtccagac ctttcgcgcg ctcgttaact ttgatatatg ccagtccttt cgcgccgtag
    54001 atcttaacaa agttaccgta atcgtcgatc tgcttacggc taagctgtgc gccgccaggc
    54061 acacgcagcg ctgccacgcg gcctttcgga tcgttagccg ggcccgcgaa gaccgcgaac
    54121 tctaccgatt tcagcaggtc agcgacatct accagctcca tcgggttacg caggtctggc
    54181 ttgtcggaac cgtagcgacg ttccgcttcg gcaaacgtca tgaccgggaa atcccccaga
    54241 tccacgcctt tcacttccag ccacaaatgg cgcaccagcg cttccatcac ttcgcgcacc
    54301 tgtggcgcgg tcatgaagga ggtctcgacg tcgatctgag taaactccgg ctgacggtca
    54361 gcacgtaagt cttcatcacg gaagcatttg actatctgat agtaacggtc gaaaccggac
    54421 atcatcagga gctgtttgaa cagctgcggc gactgcggca acgcatagaa tttacctttg
    54481 tgtacgcggg acggtaccag gtaatcgcgc gcgccttccg gggtcgcttt ggtcagcatc
    54541 ggggtttcaa tatcaaggaa accgtgatcg tccataaaac gacgcaccag gctggtaatt
    54601 ttggcgcgag ttttcaggcg ctgcgccatt tccggacgac gcaaatccag atagcggtac
    54661 ttgagacgcg cctcttcggt attaacgtgg ttagcgtcaa gcggcagtga gtctgcgcgg
    54721 ttgatgatag tgagagagga cgccagcact tcaatttcgc cggtcgccat atccgcattg
    54781 acgtttttcg cgtcacgcgc acgcacggtg cccgtaacct gaatgcagaa ctcattacgc
    54841 agttcagagg ccagctttaa cgcgtccgca cgatccggat cgaagaacac ctgcacaata
    54901 ccttcgcggt cgcgcatatc gataaagatc aggctgccaa gatcacgacg acggttgacc
    54961 caaccacaca gagtcacctg ctgccccacg tgggacagac gtagctgtcc gcaatattct
    55021 gtacgcatga gatatccctt aacttagccg caggcggatt gttgcctgcc atgcaggcga
    55081 cgaagtcgca gctttagctg tatgtcacaa ctggatgaaa aaaggcggct attatactgg
    55141 aaattctgcc gcacgataag agtcaatcca gcatgggagc gataacttgc ccgtttcatg
    55201 cggtatcgac acttggttca tactgactgt acccgggttt ttcacgcggg tattgcgtat
    55261 gctcacaaaa attaacaata tttgtcgccg ctttcctctt taatcgcgct taaggtgtag
    55321 tgaaatccgc tatttttagg agagtgatta tcatgctgaa actcaacgcg accacaaccg
    55381 ccctggtggt tattgattta caggaaggaa ttcttccgtt tgccggcggc ccgtatacgg
    55441 caaatgaggt ggtcgcccgc gccgcgcggc tggcggaaaa gtgtcgcgcc aacggctcgc
    55501 ccgtggttat ggtacgcgtt ggatggtctg atgattatgc cgaagcgtta aaacagccgg
    55561 tggatgccgc aacgcctgcg cacgcgttgc cggaaaactg gtggacctgg cctacggcat
    55621 tgggtaaaaa ggacagcgat ctggaagtga ctaaacgcca gtggggcgcg ttttacggca
    55681 ccgacctgga attacagctt cgccgccggg gtatcgacac catcatattg tgcggaatct
    55741 caaccaatat cggcgtcgaa tccacagcgc gtaacgcctg ggagttggga tttaacctta
    55801 ttattgccga agatgcctgt agcgccgcca gcagtgagca gcatcagagc agtatgacgc
    55861 atattttccc gcgcattggc cgggtacgca gcgtagagga tattttaaac gccttatgat
    55921 ctacattggc ttgccgcaat ggtcgcaccc gaaatgggcg cggctcggca tcaccagtct
    55981 ggaagagtat gcccgccact ttaactgcgt ggagggcaac accacgcttt acgcgctgcc
    56041 gaaagcggaa attgtcgatc gctggtatgc gcaaactacg gacgatttcc gtttttgctt
    56101 taaatttccc gccaccattt ctcaccaggc cgctctgcgc cattgcgacg atctggtaca
    56161 ggcgtttttt acccgcctgg cgccgctgga aacgcgtatt ggccaatact ggctgcagtt
    56221 gcccgccgcc tttggaccgc gcgatctccc cgccttatgg cagtttcttg atgcgctccc
    56281 cgccacgttt acctatggcg tagaagttcg tcatccgtgt ttttttgaca agggtgagga
    56341 tgaacagcgg ctcaatcgcg ggttacacgc gcgcggcgta aaccgcgtga tcctggatag
    56401 tcgtccggta catgccgccc atccccacag cgaggccgtc cgtgacgcgc agcgaaaaaa
    56461 acccaaagtc ccggtacatg cggtcgtgac ggccagccat ccgatggtgc gttttatcgg
    56521 tagcgataat atggcgcaaa accgtgagtt tttcgctgcc tggttgcaga aactcccgca
    56581 gtggcggcag accaccacgc cttttctgtt tttacatact ccggatatcg cgcaggcgcc
    56641 ggaactggtg aatacgcttt ggcatgattt acgcagcgtc ttaccggaaa tcggcactgc
    56701 tccgtccatt ccacagcaat cttctctttt ctgaaaatgc cccctatcat agacagtgcc
    56761 atcagccatt ttaaaaggga gtttgtatgg taagcgcgct gtatgccgtt ttgggtgcgt
    56821 tattattaat gaagttctct tttaatgtcg ttcgcttacg aatgcagtac cgtgtcgcct
    56881 atggcgacgg cggttttagc gaattgcaaa gcgccatccg tattcatggc aacgcggtgg
    56941 aatatattcc tgtcgcgctg gtgctgctgc tgtttatgga aatgaacggc gccgaaacgt
    57001 ggatggtgca tatctgcggc atcattttaa tcgccggtcg gctgatgcat tattacggtt
    57061 ttcaccaccg cctgttccgc tggcggcggg cggggatgag cgcgacctgg tgcgcattgt
    57121 tgctgatggt gctggcaaac ctgtggtata tgccctggga gttggttttc tccctgtatt
    57181 agcgcacaat atgcgccttt atttttcccg gatgtatacg ttatgtctca ccgcgacacg
    57241 cttttttctg cgcctatcgc ccgtctcggc gactggactt ttgatgaacg agtagccgaa
    57301 gttttccccg acatgattca gcgttcggta ccaggctact ccaacatcat ctccatgatc
    57361 ggcatgttag ctgaacgctt tgtgcagccg aacacgcagg tctacgatct gggctgctcg
    57421 ctgggtgccg cgacgctgtc tgttcggcgt aatatccgcc atgagcattg tcgcattatc
    57481 gccgtcgata actccccggc catgattgaa cgctgccgcc gtcatattga tgcgtataaa
    57541 gcgcctacgc cggttgaagt cgttgaaggc gatatccgcg atatcactat tgaaaacgcc
    57601 tcgatggtgg tgctgaattt taccctacaa ttccttgaac ctgccgaacg ccaggcattg
    57661 ctggataaga tttacctggg gttgaatccc ggcggcgcgc tggtactgtc ggaaaaattt
    57721 agctttgaag acgcgaaagt gggcgagctg ttattcaaca tgcaccacga ttttaaacgc
    57781 gctaatgggt acagcgaact ggagatcagc caaaagcgca gtatgctgga aaacgtgatg
    57841 ctcaccgact cggtggaaac acataaagcg cgcctgcgtc aggcgggttt cgaacacagc
    57901 gaactgtggt tccagtgctt taacttcggg tcgcttgtcg cgttaaaagc cggagttgcc
    57961 gcatgatcga gtttggtaac ttttatcagc tcattgctaa aaatcatctc tcccactggc
    58021 tggaaacatt gcccgcgcag attgccgcct ggcaacgcga gcagcagcat ggcttgttta
    58081 aacagtggtc gaacgcggta gaatttttac cggaaattac gccctggcgg ctggatttac
    58141 tgcacagcgt cacggcggaa agcgaaacgc cgctcagcga aggtcagcta aagcgtattg
    58201 atacattgct gcgtaatctg atgccgtggc gtaaaggccc gttctcgctt tatggcgtag
    58261 atattgatac cgaatggcgc tcagactgga agtgggatcg cgtactgccg catctgtcag
    58321 atttaaccgg ccggacgatc cttgatgtcg gctgcggcag cggctatcac ctgtggcgga
    58381 tgattggcgc gggcgcacat ctggcggtcg gcatcgatcc tacacagctt ttcctctgcc
    58441 aatttgaggc ggtgcgtaaa ctgttgggta acgatcagcg cgcgcatctg ctgccgttgg
    58501 gcattgaaca actcccggcg ctgaaagcat ttgataccgt cttttcaatg ggggtgcttt
    58561 atcaccgtcg ctcgccgctg gagcatctgt ggcaattaaa agatcagttg gtcaacgagg
    58621 gtgagctggt actggaaacg ctggtcgtcg acggcgacga aaataccgta ctggtgccgg
    58681 gtgaccgcta cgcgcagatg cgtaacgtct attttattcc ttccgcgccg gcattaaaaa
    58741 aatggctgga aaaatgcggc tttgttgatg tgcgtatcgc tgacgtttgc gtcactacca
    58801 ccgaagagca gcgccgtacc gaatggatgg ttaccgagtc gctggccgat tttcttgacc
    58861 cgaacgatcg cagcaagacg gtggaaggct atcccgcccc gcagcgcgcg gtgctgattg
    58921 cgcgtaaacc gtgatggatt gccgaatgac cgttacgtat agcaccgttt ctccaaaata
    58981 gttcaagttg cagcaaggcg gcaacgcagc aaatccccgg gaacgtaggt agctacgtga
    59041 ccggggtgcg cgaggcggcc aacgctgctg cggcttgaaa tatgaaggag aaaaaaaggc
    59101 ccctgttgaa ttggcagggg cctggtacga gcaagcatca tattgggcga catgatgcaa
    59161 cggtaaaaat catttggcct gatggcgaac aatgattcct ttcattctca gcgaccgccg
    59221 caccctctac cctatagcga gaatactcgt ccgcctgtat atcggcagac atcgataacc
    59281 cctgattgcg atagcgcatc ggcgaaggca gtaagactcc ggcggaactg tgtacttccc
    59341 gtactccggc atcgaggaaa ttctgcaggt tatttgcacg aacccccgca ccagccataa
    59401 tgattggagc atccccctgg gcaataagtt ccataattat tgataaacct tgcgccgcat
    59461 cggctttttg cccggaagtc agtactcttg ctacgcctgc gtcagccaga ttctttagcg
    59521 cattgaaggg attagcgcac atatcgaagg cgcggtggaa tgtcaccgcc agcggcccgg
    59581 ccgccgccat tattttttcc attcgcgaca tatcgacatc cccatcaacg gtcaacacgc
    59641 cagtaaccag cccgggaaac cccaactctc tgacgagacg gatatcttcc agcatggcgg
    59701 caaattcgcc gtcagtgtag taaaaatctc cgccgcgagg acgaataatc ggatgtacgg
    59761 gaatcgtaat atgctcgcgt acgctgcgta agatgccgaa agaaggcgta agcccccctt
    59821 ctttcggcgc ggcgcacagt tcgatacgat ccgcgccgtt tcgctgcgcg gtgagcgcgc
    59881 attccatgct gtaacaacag atctcaagta acgccatatt cactccgctc ggcaggttaa
    59941 tgggccgcct gttcgctggc gacaatcgct tcaatcgacc atggatgaaa ttttaccgtg
    60001 acgcggccat cggtcacagc cagcgtaggg tttggcaaac gttcatgctc gccctgtggc
    60061 gaactggttt taaccacgat ccccggctga ctaagcccct catccgacaa caacgccagg
    60121 gccctcgcgt tcaaggtctc cggctcgccg ggcagcacga tttcaatatg ctcccaccct
    60181 tcgtgtggat agcgtttttc tcccggccac ggtaattcaa taacagaaaa ccgccagtgt
    60241 tccacacata ccggttcatg cagtttaaac agacaaatcg gcctgccgtt gatgatattt
    60301 tccgacagta gctcgccgca ttgttcaaaa ccgcgacgcc aacgctccgc cgtcgtattc
    60361 tggtgacagc gcaatgaaat gtgatcggcc tcaagggcgt taatctgcag accaaggcga
    60421 gtggaaagtt ctctgaacgc cagagtgaat cgcggtaaat ctgcggaaat atcatgcagt
    60481 tcatcaatgt gttgccagtt cgccatatca ggacgctctt cttgctgtga aaaccgctaa
    60541 tttacgctgt tgcgccccgg caaccaacct ttgatttgat tgggcgttta ttgaatgctt
    60601 atgcagatta ttgttgcgta tatttcaggc gacgcgccgc gcgcgcaatg ctgacgccaa
    60661 cgggcatttg cagtatactc ccgccctaat tcttaaactg gcgcgggcaa tacagtccgc
    60721 ttcataaacg taaggtattc cggtgaatat tcaggctctt ctctcagaaa aagttagtca
    60781 ggccatgatt gctgcaggcg cgcctgcaga ttgcgagccc caggttcgtc agtcagccaa
    60841 agttcagttc ggcgactatc aggccaacgg catgatggca gttgcgaaaa aactgggtat
    60901 ggccccccga caacttgcag agcaggtgct gactcatctg gatctcagcg gcatcgccag
    60961 caaggttgaa atcgccggcc ctggctttat caatattttc ctcgaaccgg cttttctcgc
    61021 tgaacaggtg caacaggcgc tgacctccga tcgtctgggc gtttctcagc cgactcgcca
    61081 gacgattgtc gtcgactact ccgcgcccaa cgtcgcgaaa gagatgcacg ttggtcatct
    61141 acgctccacg atcattggcg atgcggcagt gcgcacgctg gagtttctgg gccatcatgt
    61201 tattcgcgct aaccacgtcg gcgactgggg cacccagttc ggtatgctta tcgcttggct
    61261 ggaaaaacag cagcaggaaa acgcgggcga catggcgctg gcggatctcg aaggatttta
    61321 ccgcgatgcg aaaaaacatt atgacgaaga tgaaacgttt gccgagcgcg cgcgtaacta
    61381 cgtcgtcaaa ttgcagagcg gtgataccta tttccgtgag atgtggcgta agctggttga
    61441 tatcacgatg acgcaaaacc agatcaccta tgatcgtctg aacgtcactc tgacgcgtga
    61501 cgatgtgatg ggcgaaagtc tgtataatcc gatgctgccg ggcatcgtcg ccgatctgaa
    61561 agccaaaggc ctggcggttg aaagcgaagg cgcaacggtg gttttccttg atgagtttaa
    61621 aaacaaggaa ggcgacccga tgggcgtcat tattcagaag aaagatggcg gttatctgta
    61681 taccactacc gatatcgcct gcgccaaata ccgttacgaa acgctgcacg ccgaccgcgt
    61741 gctctactac attgactccc gtcagcacca gcacctgatg caggcctgga ccattgtgcg
    61801 taaagccggt tatgtgccgg attccgttcc gctggaacac cacatgttcg gcatgatgtt
    61861 gggtaaagac ggtaaaccgt ttaaaactcg cacgggcggt acggtgaaac tggcggacct
    61921 gctggatgag gcgctggagc gcgcgcgtcg tctggtggcg gagaagaacc cggatatgcc
    61981 ggctgacgag ctggaaaaac tggctaacgc cgtcggtatt ggcgcggtga aatacgccga
    62041 tctgtcaaaa aaccgcacca ctgactatat cttcgactgg gataatatgt tggctttcga
    62101 aggcaatacc gcaccttata tgcagtatgc ctatacgcgt gtgctgtctg ttttccgtaa
    62161 agcggacatc gacgagcagg cgctggcgag cgcgccggtt atcattagcg aagatcgcga
    62221 agcgcagctc gctgcccgtc tgctgcagtt tgaagaaacc ctgacggtgg tcgcgcgtga
    62281 aggtacgccg cacgtcatgt gcgcgtatct gtatgacgtc gccgggctgt tctccggctt
    62341 ctacgagcac tgccctattc tcagcgccga gaatgacgcg gttcgcaata gccgcctaaa
    62401 actggcgcaa ctgacggcga agacgctgaa actgggtctg gatacgttgg gtatcgaaac
    62461 cgtagaacgc atgtaaacgc gccgtcgtta acatcatcag gcctgactcc gggtaacgga
    62521 ctcaggcctt tttattgcca cagcggtata tctgtaacaa atcacaagga atgacacatt
    62581 tctatagaga gatggaacat cttttacctg tgctggcgct gaccgccccg tatcattagg
    62641 cggcggattg ttcaggtaca ggtaatgact tttaaagact ttgatgcgga agagaaactc
    62701 ttcctgagac gtgtgattgt ggcgtttggt gtagtggttg tctgctttgg tatcctgatc
    62761 ttcaacctct ataacttgca aatccgccag caccactact acaccacccg ttcgaatgag
    62821 aacgatatca agatgctacc cgtcgcgccc acgcgcggca tcatttacga tcgcaacggc
    62881 attccgctgg tgcgtaacgt aacctggtat gatatcgcgg ttacgcccta taaaattgcc
    62941 gatatggatg cgctgctaaa acagctcacc cctattgttg atctctcccc cgacgatatc
    63001 gccgactttc gccgcgcgct aaaatccagt agccgctatc gtccggtagt gctcaaaaac
    63061 gcgctaacgg atgttgaaat cgcacgcttt gcggtcaatc agtttcattt caacggcgtc
    63121 acgatcaata gctatcagga tcggcagtat ccttacggcg cggagctggc gcatgttctc
    63181 ggttacgtgt caaagataaa cgataacgac cttaaagcgc tggataaaaa agggctggca
    63241 gagaattacg cggcggacca taacatcggt aaacagggga ttgagcgtta ctacgaaaac
    63301 gatcttcatg gcaaaaccgg ttatcaggag gtcgaggtgg ataatcacgg gcgtattgtc
    63361 cgcctgctga aagacgttcc tcccatcgcg ggtaagaaca ttcacctgac gttggatctc
    63421 catttacaag agtacattga aagtttgctg gccgggcagc gtgctgccgt actggttgaa
    63481 gatccgcacg atggttcagt gctagcgatg gtatctatgc ccagctacga cccgaacccc
    63541 tttgtaaaag gcattagcta tcaggattac ggcaaactgc tgcacgataa aaatctgccg
    63601 ctgatcaacc gcgtgacgca agggctttat cccccggcgt caacggttaa accctatatg
    63661 gcgatgtccg cgctgttatg cgggattatt acgccgcaaa ccaccttctt tggcgcgcca
    63721 acctggacgc ttcccggcac gcagcgtcat taccgggact ggaaaaaaac cggacacggt
    63781 atgctggatg tcactaaagc gattgaggaa tctgcggata cctttttcta ttaggtcgct
    63841 tatatgatgg gtattgaccg tatcgacacg atgttgtctc agttcggcta tggcaaaccg
    63901 acgggtatcg accttagtga agagtatgac gggctgcttc ccagccgcgc atggaaacag
    63961 cgggtccata aaaaagcctg gtatcagggc gataccatct ctgtcggcat cggccagggc
    64021 tactggattg ccacccccat ccagatggta aaagcgatgg tggcgctcat caacaacagt
    64081 aaggtgattg cccctcacct gttactcaat gaagagagcg gcaaaacggt ggttccgtat
    64141 cgtccttcag gaacaccggc acagatagcc gatccggcgt cgccatactg gggactggtg
    64201 cgtcaggcga tgtacggcat ggcgaatgca cccaacggaa cgggctataa gttctttcac
    64261 accgcgccct acggcattgc ggccaaaagc ggcacgtcgc aggtgtttag cctgaaagaa
    64321 aatcagacct acaatgcgaa aatgatcccc attcgcctgc gcgatcatgt gttttatacc
    64381 gcttttgcac cgtataaaaa ccctaaggtc gctattgcct tgattctgga aaacggcgga
    64441 agcgacggcg ttaccgccgc gcccatcatg cgaaaaatcc ttgaccacct gtttgatcca
    64501 caggctgata ccacacagtc gggtcaggcg ccatagtcaa ataagcaaag cgccatcaga
    64561 caaggatacg accggaatat ctgcatacat cagaaatagt tacgcagata ttccgtcaaa
    64621 cacagcattg ccatcgcctg cccgtaaggc atagaggtca acggaatatg acggtaaaaa
    64681 tcgagatcgt ggcccatgcc agtgccaaat gatgtttgca gcagttcgcc ttccggcgag
    64741 atatgtttca ctatcccccg aatagctttt tccgccacct gcgcatagtg ccgttcgaca
    64801 tagcgtttgc gcaccgcttt aagaataccg taggcaaaac ccgccgtcgc cgacgcctca
    64861 agataagagt gcggatcgtc aagcagcgta tgccacaaac cgctttcatc ctgacatttc
    64921 gccagcgcgg cgatctgcgc attcagtacc tggaccagat aacggcgcac ggcattattt
    64981 tccggcaagt ccagcagttc aagaaaatcc gggaccacaa tggtcagcca gctgttgccg
    65041 cgcgcccagc gagcgttagc gaagttatga tgaccgtcat agctccagcc gtggaaccac
    65101 agccccgtct ctttatccat caaattctgc acgtgtagca ggaactgata ggttgcctct
    65161 tccacatatt ccggccggtt caacagctta ccgattttcg ccagcggcag caccgtcatc
    65221 attagcgtgt cgtcccacat ctgctgatga ttttcctccg ccagcgtgat gtgctgcatt
    65281 ccgccgtaat cggtacgggg catttcattc atcgcccatt cggcccacgt ttccagccac
    65341 ggtaaatacg ctggattacg cgtctcttca tagcgatacg ccagcgttaa aaacggcgcc
    65401 atcgtattaa cgtttttcgt cgtcgcgcct tccgcaaagc gatcggcaaa ccagtcatca
    65461 atgatcttac gcatcgtctg gtcgccggtc tgttggtaat agtgatacat tccgtacagg
    65521 cccacgccgt gcgtccactc ccatccggcc cagcctttag tatcgatcac gcgtccgtcg
    65581 tccagtcgca ataaaaattc gcctgtctca tctttaatat tgaccaggtt atgcgtcacc
    65641 ttttgcacca gggcttttag ttcatctctg gcgataaaat gctcaggctg acgcaatagc
    65701 ggactgtgtt tgactggata aaccatcatt tgcttaacct ctgtgtaatg tcgaattcag
    65761 tgctgcgtgc agttttaccg ccgacgcagt cgattcgcta cagtaaaagc taagctgggc
    65821 ggaaaccttt ttgtttctgc cattgtcaga gcgtaaatgg caaaaacgca aagagtccgg
    65881 caacctacct caccatttta taaaacgacg tttctattta ttcaaaaaga gagtcaggtc
    65941 tgctacctgg caaagaaagg ggcggttagc ggtagttcac aatcacctga ttgctccgca
    66001 cttttaacgc cgggataagt ctgccgccgc cggggacttc ccagacaaag cggagcggct
    66061 cgactgcggg aacatgagca aaaccgtggg tcgtgccact ctgaccatca agttctacgc
    66121 aacgggactg ggaacataaa cgtacccgta atcctgcggg ggtcgggcca ttcagttcat
    66181 aacgccaggc gaccagcgtc atcacaccgg aaaccggctg gcgcgccgac aatggcgaag
    66241 acgatgcgga aacgccccgg taatttaagg ttacgcccat accgctatcc tgccacgcgc
    66301 cttcgcctgc ggcctgaacc gttaggggaa agagcaacaa tgccagccat ttacgcatta
    66361 ttttcctcca atggtcgccg tcatgcggat atgacggtta tcggaaagct caaggttcga
    66421 caacaccacc agctgcggta aactgcgccg caaaaagcgg gacaataatg gacgtagcgc
    66481 atggttaacc agtaataccg gcggcgcgcc aagcatttcc tggcgagaaa gtgcctcttg
    66541 ggtctgcgcc agcaggcgat ccgccaaccc aggctcaagt ccaccgccgc cctgcaatgc
    66601 ctgaagcagc aaacgctcca gcgcggtatc caggccaatc acctgcactt cttcattacc
    66661 ggggaaccac tgttgcgtaa tcgctcgccc taatgccacg cgtaccacgg cggttaattc
    66721 atgcggatcg ctttgtaacg gcgcatgttc cgccagcgtt tccagaatgg tgcgcatatc
    66781 gcgaataggg actttttccg ccagtaagtt ttgcaggact ttgtgtaaag tcgtgagggt
    66841 cacgacgccg gggaccagat cttccgtgag tttaggcatc tcctgagaga cacgatccaa
    66901 cagttgctgc gcttcctggc ggccaaacag ttcggcggag aattggccaa tcaagtggtt
    66961 aaggtgcgtc gccacaacgg tactggcttc cacgacggta aagccctgaa tttgcgcctg
    67021 ctctttcagg gcgctttcaa tccagatggc atcaaggcca aaagctggat cgacggtttt
    67081 ctcgcccggt agcgttcccg ccgccgtgcc ggggttaata gccagccagc gtcccggata
    67141 ggcgtccccg ctgccgatct ctaccccttt catcaaaata cggtagcgcg caggctgtaa
    67201 atccatattg tcgcgaatgt ggaccaccgg cggcaggaac cccatatcct gcgcgaattt
    67261 tttacgaata ctgcgaatac gtccgagcaa ttcgccatcc tgttgaaaat ccaccatcgg
    67321 gatcaggcgg tagcccactt ccattcccag tgaatcctca agctgtacgt cattccaggt
    67381 ggcttcgacc accgagttat tttccggcat ttttaccggc tgcggctcct ccggcgcttt
    67441 ttcttcacgc ccgcgcagcc accatgccag gccgagcaaa gcggcggtaa agagtaaaaa
    67501 taccaggtta ggcattccag gcaccatgcc aagcagcccc agcaccgccg ccgccagcag
    67561 cattaccctt ggattactga acagttggcc aaccatctgc tcgcctacat cctgatcggt
    67621 actgacgcgg gtcacaatga cgcccgccgc cgtggagata accagcgccg ggatctgggc
    67681 gaccaggccg tcgccaatgg tcagcagggt gtagctttcc gccgcgctgc ccatgctcat
    67741 tccgtgctgt aatacgccga ccagcagccc gcctaccacg ttaatgacca tgatgagaat
    67801 accggcgatg gcgtcgccgc gtacaaattt acttgccccg tccatcgaac cgtagaagtc
    67861 ggcttcctga gtgacttccg aacgccgttt tttggcctcg tcttcaccaa tcagaccggc
    67921 attaagatcg gcgtcaatcg ccatttgctt accgggcata ccatccagca caaagcgcgc
    67981 gccgacttcg gcaatacgtc cggcaccttt ggtgatgacc atgaagttga taatgacgag
    68041 gatgataaaa accacaatcc cgatcgcgaa gttaccgccg accaggaaat gaccgaacgc
    68101 ctctaccacc tttcccgccg ccgccgcgcc ggtatgccct tccatcaaaa taatgcgcgt
    68161 tgaggcaacg ttaagcgcca gacgcagtag cgtggtaaac agcaggatgg tcggaaacgc
    68221 ggcaaaatcc agagtacgct gggtaaacat cgccaccagc agcaccatga tcgatagcgc
    68281 aatattaaag gtaaacaata agtcgaggat aaaagcaggt agcggcagca ccatcatcga
    68341 caaaatcagc agaatgagga tcggcccggc aagaatttgc cattgcgtcg atttcaggtt
    68401 gctgggcagg cgcagcatcg cgaccagatt agccatcagt attcttctcg ttcataaaat
    68461 ccagcgcttc tggcaccgga aggttctcag gttgtggagg acgttgcccg cccgcaagcc
    68521 gccagcgttt aagctgccag acccaggcca acacttccgc aacggcagca tataactgcc
    68581 cgggaatttg ctgaccgatt tcggcgtggc gatataatgc ccgcgccagc ggcggcgctt
    68641 ctaaagtggg aacccgatgt tcagcgccga tctcgcgaat gcgcagcgct attaatccag
    68701 cccccttcgc gaccactttc ggcgcgctca ttttgttttc gtcatactgc agcgccacgg
    68761 aatagtgcgt cgggttagtg acaatgacgt ccgctttcgg cacatcttcc atcatgcggc
    68821 gctgcgcggc ggcgcgttgc atctggcgaa ttttgccctt aacatgcgga tcgccttcgc
    68881 tctctttaaa ttcgtcgcga atgtcctgcc gcgacatgcg taattttttc aggtggctaa
    68941 agatctggaa aaaaacgtca aatcccacca tcgggatcac gcccagtacc accagtaacg
    69001 cgcagagtcc aaccagatcc agcgcattcc ccattgcgac gatcggcgac tccgccatca
    69061 ggcgcatcat ttgcggccag tgattccaga gataaaagcc ggtaacgcag ccgaccagcg
    69121 tggatttcaa caccgctttt agcagttccg cgccggtctg cgccgaaaac atgcgcttaa
    69181 ttcccggcag cgggtttaat ttagaaaatt ttggctgtag cgacttaccg ctaaaaatca
    69241 ggccgccaag cataaccggc gagataagcg ccaccagcac cacgcccgcg atgagcggta
    69301 gcagtgccat catcgccgct ttaatcagca aaattatctg ccccaggatc aggttaggat
    69361 cgttcaccat acggtgatcg aagtgcaggc ctgctgagag cattcccgcc agctgccgcg
    69421 ctaacgactc gccgccgaac caaataatac aaacgcccac cagcaatatc agcagtgagg
    69481 tcagttctct ggaacggggg atctgccctt cttcccgcgc tttttcaagt cggtggggtg
    69541 tgggggcttc tgttttgtcg tcgtcgctct cttctgccac gcagcaaacc ctggatagat
    69601 tgataagcga gaatgatgcc agaaccgctt tacgccaatg ggcagagtaa gcggtaaaaa
    69661 aggcggggtt tatggcgtta atagagatag ccggatacga taagaaagta tcgtatccgg
    69721 ccgggttgac ggattcggac ccgataagcg cagcgccatc aggtcaaaaa agcttaaaag
    69781 ccaagactgt ccagcaggtc gtccacctgc tcctgactgg cgacgacgcc agctttcgag
    69841 gtatccacct gcgggccgtt gagcaagctt tcgttctcgc gttttggtcg cgcgctctgt
    69901 tccgggatgt tttccagcag caccattaac aactggcgct caatctcctg aatcacgtcc
    69961 atcatgcgtt tgatcacctg acccgtcaga tcctggaaat cctgcgccat catgatgtcc
    70021 agcagttgcg cgttagtaaa gctggtatgg cccgggacat ccctgagaaa ctggcgcgta
    70081 tccgtcacca gttcacgggc gtcggaaagc tcgatcggat tgtcaaacca ctcgtcccaa
    70141 cgttgggtta gcgctttcgc ctctttttcc atcgcatcct gatgcggctg cgaggcttcg
    70201 acactgttta gcgcgcgttc cgccgcctgc gccgtcatct ggacgacata atccagacgg
    70261 tcgcgcgcat cagggatcgc ctccgccgct tcggcaatcg cctggtccag ccccagttca
    70321 cgcaggctgt cgcgcagcat tcgggtcaga ctaccgatgc gcgcaatgat gtctcctgct
    70381 gagccttcat cagcaggctt gatagatggt tgcatcatca tcgcatcctc acatgcccag
    70441 tttctcaaag attttgttga gcttctcttc cagagtcgct gcggtgaacg gttttacgac
    70501 ataaccgctg gcgccagcct gtgcggcggc gataatattc tctttcttgg cttccgccgt
    70561 gaccatcaac acgggtaacg ccgacatggc gctatcggcg cgaatggttt tcagcagctc
    70621 caggccatcc atgttcggca tgttccagtc agagataata aaaccaaagc cgcctgcctg
    70681 gagcttgttc agcgcatcga cgccgtcttc ggcctcttcc acattgttaa atccaagctc
    70741 ttttaagagg ttgcgcacga tacgacgcat ggtcgaaaag tcatccacaa ccaaaaattt
    70801 aagctcttta tccgccataa aatactactc ctggttcaaa tacgtatcgc ctgtccggca
    70861 ctgattttcg ccagcatctg ctggcttacc tggctaagat cgaccacttc gcttacgcca
    70921 cccatattga tggcctcgcg cggcatgccg aacaccacac aacttgcttc gttttgcgca
    70981 atggtccagg cgccagcctg gtacatcgct aacattccag cggcgccatc gttgcccatc
    71041 cccgtaagaa tgacgcctac ggcgttgcgc cccgcgtgtt tcgccaccga atgaaacagc
    71101 acatccacgg aaggccgatg ccggtttacc ggcgggccat catgaatttt gatttgataa
    71161 ttcgccccgc tacgcgccag ctccatatgc ttgtcgccgg gcgcaatgta ggcatgacct
    71221 ggcaatacgc gttcgccgtc ctccgcctcc ttcacgctga tttgacagag tttattcagg
    71281 cgctcggcaa acgagcgggt aaagccaggc ggcatatgct gcgtaataat cactgccgga
    71341 ctggaaagcg gcagcggttg cagcacatgt cggatagctt cagtaccgcc cgttgaagcg
    71401 ccgatagcaa tcagtttttc cgaactgagc agcggaccgg cttttaaggt tgtcggggcc
    71461 gccatcggtt tatgtgcggc gatgcgggcc cgcgcggcgg tacgcacttt ttcggcaatc
    71521 atctcgctat acgccagcat accttcacga atgccaagct gcggtttggt gacaaaatcg
    71581 atggccccca actccagcgc ccgtagcgtc acttcggaac ctttcccggt cagcgaagag
    71641 accatcacca ccggcatcgg tcgcaggcgc atcagttttt ccagaaaatc gaggccgtcc
    71701 atacgcggca tctcaacgtc caaggtcaat acgtccggat taaatttttt gatgagatcc
    71761 ctggcgacca acgggtccgg cgcagtcgct accatctcca tatcgctatg gctattaata
    71821 atttcagtca tgatttggcg cattagcgcg gaatcatcaa ctgacaatac cctgatttta
    71881 ctcatgcttt atccttactt agcgcataca ccgtctgtcc gcgcaggcta aactcgcgca
    71941 cgaggttgct aaagttttct gagtgaccgg caaacaacag tccgtcaggt ttaaggagtg
    72001 gaacaaaacg gcgcagaatg tcctcctgag tcgttttatc aaaatagatc atgacgttac
    72061 ggcaaaaaat cgcgtcaaag ggaccgggta cgttgtactg cttttccaat aaattaacgg
    72121 aggaaaattc aacataattg gccagttgct gacgcacgcg caccagtcct tcatgcggcc
    72181 ccgtaccgcg catgaagtaa cgttgtagct gctgcggcga taacgttttc agttcgctga
    72241 ggcgataaat accgcttctc gctttttcca gcacttcagt atcaatatcg ctggcgaata
    72301 ctttccagcg accgggggcc atccctaacg catccgccag cgtaatggcg atactgtaag
    72361 gttcttctcc tgtcgatgcc gccgcactcc agacgcggta ctcgccgtgg cggcgacgcg
    72421 catgttccgc aaggatggga aaatggtgcg cctcgcgaaa aaaagcggtc aggttggtag
    72481 tcagagcgtt gataaaagcc tgccactcaa cgctgttttg attagcctcc agcatactga
    72541 gataacggcc aaaatcatcc agtcccaggg cacgcagccg acggaccagg cggttataaa
    72601 ccatatcccg cttatggtcg gccagcacga tccctgcacg ctggtagatt aattgacata
    72661 tccgacgaaa atgcgcgtcg gacagcgcga ggcgctgtgt catctgtaac aatactgacg
    72721 tttgcccgga gggcagagat gatgtcatag cgccttctta atcacattca aagtacaacg
    72781 ggcgcgccct gcggcagcgc catgcttccc gtattacaca ttttttgctt ttatctatgc
    72841 gaaccagacg aaagggatcg gcgggttcgc aaattaatcg ataaccgaca gcacacagcg
    72901 cacatcgatc agaaggtttc ccagttcgca tcatccccgg cggctaaggg ccgcggcgta
    72961 ttgccggact gagcgtccac tgataaacgc atctcaggtt tatttaccgc cagcggtcgc
    73021 gatgccaggc ggaaagccga taccg
//
LOCUS       DAGWFR010000007        72631 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.007, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000007 DAGWFR010000000
VERSION     DAGWFR010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 72631)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 72631)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..72631
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.007"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..1870)
                     /gene="nifJ"
                     /locus_tag="MOX77_000516"
     CDS             complement(<1..1870)
                     /gene="nifJ"
                     /locus_tag="MOX77_000516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate:ferredoxin (flavodoxin) oxidoreductase"
                     /protein_id="HCA3356168.1"
                     /translation="MQTIDGNGAVASVAFRTSEVIAIYPITPSSTMAEQADAWAGNGL
                     KNVWGDTPRVVEMQSEGGAIAAVHGALQTGSLSTSFTSSQGLLLMIPTLYKLAGQLTP
                     FVLHVAARTVATHALSIFGDHSDVMAVRQTGCAMLCAASVQEAQDFALIAHRATLKSR
                     VPFIHFFDGFRTSHEINKIIPLTDETILNLMPQAEIDAHRARALNPEHPVIRGTSANP
                     DTYFQSREATNPWYNAVYDHVEEAMKAFGDATGRQYQPFEYYGHPQAERVIIMMGSAL
                     GTCEEVVDELLIRGEKVGVLKVRLFRPFSAKHLLQALPETVRAIAVLDRTKEPGAQAE
                     PLYLDVMTALAEAFNNGERETLPRTIGGRYGLSSKEFGPACVLAVFNELSRAKPKPRF
                     TVGIYDDVTNLSLPLPENTLPGSAKLEALFYGLGSDGSVSATKNNIKIIGNSTPWYAQ
                     GYFVYDSKKAGGLTVSHLRVSEKPIRSAYLIAQADFVGCHQLQFIDKYQMAERLKPGG
                     IFLLNTPYSADEVWSRLPQEVQAVLNQKKARFYVVNAAKIARECGLGARINTVMQMAF
                     FHLTHILPGDSALVELQGAIAKSYSSKGQDLVERNWQALALAQESLAEVPLQAVNPH"
     gene            complement(1931..2242)
                     /locus_tag="MOX77_000517"
     CDS             complement(1931..2242)
                     /locus_tag="MOX77_000517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reverse transcriptase"
                     /protein_id="HCA3356169.1"
                     /translation="MAKHAPQLPAEQVRYCKPTIITRHIPPKTLRAFLSPLFIHPNDT
                     ALNNRQQKLTRREAKRAFMRFINIYWQFFTSFRQEIAILLPPGTQKRKWGLKGFAKIK
                     G"
     gene            2146..2412
                     /locus_tag="MOX77_000518"
     CDS             2146..2412
                     /locus_tag="MOX77_000518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015964583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF333 domain-containing protein"
                     /protein_id="HCA3356170.1"
                     /translation="MRAAFWVGCAALLLSACSSEPVQQATAAHVSPGMKAAMSSAGEA
                     NCAMIGGSLSAARQLDGSVIGMCALPNGKRCSEQSLAAGSCGSY"
     gene            complement(2456..2866)
                     /gene="hslJ"
                     /locus_tag="MOX77_000519"
     CDS             complement(2456..2866)
                     /gene="hslJ"
                     /locus_tag="MOX77_000519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock protein HslJ"
                     /protein_id="HCA3356171.1"
                     /translation="MKKIVTLVALSIIMTGCVSSGKVSVKREQLEHHRFVLESVNGKT
                     VTGPELSFGEDMTVSGKMCNQFTGEGKLSDGELKVKNLAMTRMMCADPQLNALDGTLS
                     ELFSKGAQVDLTANQLTLATAETTLMYKLADLAH"
     gene            complement(2977..3966)
                     /gene="ldhA"
                     /locus_tag="MOX77_000520"
     CDS             complement(2977..3966)
                     /gene="ldhA"
                     /locus_tag="MOX77_000520"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-lactate dehydrogenase"
                     /protein_id="HCA3356172.1"
                     /translation="MKLAVYSTKQYDKKYLQQVNEAFGFELEFFDFLLTEKTAKTANG
                     CEAVCIFVNDDGSRPVLEELKKHGVKYIALRCAGFNNVDLDAAKELGLQVVRVPAYSP
                     EAVAEHAIGMMMTLNRRIHRAYQRTRDANFSLEGLTGFTMHGKTAGVIGTGKIGVAAL
                     RILKGFGMRLLAFDPYPSTAALDLGVEYVDLQTLFAESDVISLHCPLTPENYHLLNHA
                     AFDQMKNGVMIINTSRGALIDSQAAIEALKNQKIGSLGMDVYENERDLFFEDKSNDVI
                     QDDVFRRLSACHNVLFTGHQAFLTAEALISISETTLQNLSQLEKGEACPNALF"
     gene            4233..6869
                     /locus_tag="MOX77_000521"
     CDS             4233..6869
                     /locus_tag="MOX77_000521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdbH family protein"
                     /protein_id="HCA3356173.1"
                     /translation="MKGKYKAALALLLLLILVPLTLLMTLGLWVPTLAGIWLPVGTRI
                     ALEQSPRLTRHGLVIPDLRYLVNDCSLAHITQAELTHPSRWLLNIKSLKLDAACLAKL
                     PASEASPAAPRTLAQWQSMLPNTWINIDNVILAPWPEWQGKLAISMTPVIQQIRYQGE
                     KVKFQGQLRGQALTVSQLEIAALANQPPVSLAGEFMLPLVPDGLPVSGHAAATLRLPQ
                     EPSLVDAELEWRDNAGQLIVMARGNPDPILDLPWAVTRQRLTVSDGRWNWPYQGFPLS
                     GRLAFNIDNWQAGPDNARVSGRLNILTQGDAGKANAVLTIGPGKLSMDSSEMPLQLTG
                     EAKQKDLIFYAVLPAMFRGSLADPQLTFAPGALLRSRGRVIDALDIDEIRWPLAGVKV
                     TPRGVDGRLQAILRAHENEMGDFVLHLDGLANDFLPDAGRWRWRYWGQGSFTPMRARW
                     DIAGQGEWHDNTIRLTSLSTGFDQLHYGAMTVTSPRLALDKPIVWVRDATTPSLQGAL
                     SLEAGKTVFTSGSVLPPSTLNFSVEGREPTLFQFKGDLRAGAIGPVRLNGRWDGERLR
                     GQAWWPKQSLIVFQPLLPPDWKMTLREGSLYAQVAFSAAQGQGFEAGGHGVLKGGSAW
                     MPDNKINGVDFILPFRFHNGAWQLGTRGPVSLRIAGIVNQVTAKNITADLQGGYPWSE
                     SNPLLLSDVSVDVLGGQIIMKQLRMPQHDPALLRVQNISSSELISAINPKQFAMSGPV
                     SGALPLWLNNEKWIIKDGWLTNPGPMTLRIDKDTADAVVKDNVTAGSAINWLRYMEIT
                     HSWTKINVDNLGVLTMQAAITGKSRVDGKTAIVNLNYTHEENVFTLWRSLRFGDNLQA
                     WLEQNTALPQPPCRKDKDCEDK"
     gene            6869..7060
                     /locus_tag="MOX77_000522"
     CDS             6869..7060
                     /locus_tag="MOX77_000522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YnbE family lipoprotein"
                     /protein_id="HCA3356174.1"
                     /translation="MKMSIAMLSALASFIVVGCTPRIEVAAPEQPITINMNVKIEHEI
                     HIKVDKDVEELLKSRSDLF"
     gene            7068..7391
                     /locus_tag="MOX77_000523"
     CDS             7068..7391
                     /locus_tag="MOX77_000523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdbL family protein"
                     /protein_id="HCA3356175.1"
                     /translation="MKKYLILWVLTLSLLTPSVWALTLDEARTQGRVGETLNGYLVAL
                     KNDAETQKLVLDINHARRASYQQLADSNHLPVDEVAKMAGQKLVKRARPGEYVQGING
                     KWMRK"
     gene            7534..7983
                     /locus_tag="MOX77_000524"
     CDS             7534..7983
                     /locus_tag="MOX77_000524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HCA3356176.1"
                     /translation="MTSEKLSAACHCGSVVFTVQLSDGFHTARRCNCSFCRMRGAVAV
                     SAPLSGIKVLKGQDKLTEYRFNTGKAVHFFCSVCGIYTFHQRRSNPDQYGVNVACIEN
                     VSPFDFACVEVNDGVTHPSDGGSSGVVGYLRYEPKKSPPVETGGKNI"
     gene            complement(7980..8585)
                     /gene="azoR"
                     /locus_tag="MOX77_000525"
     CDS             complement(7980..8585)
                     /gene="azoR"
                     /locus_tag="MOX77_000525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-dependent NADH-azoreductase"
                     /protein_id="HCA3356177.1"
                     /translation="MSKVLVLKSSILAGDSQSGQLTDYFIEQWREKHVADEITVRDLA
                     ANPVPVLDGELVGAMRPGDAPLTPRQQDALALSDELIAELKAHDVIVIAAPMYNFNIP
                     TQLKNYFDLIARAGITFRYTEKGPEGLVTGKRAVVLSSRGGIHKDTPTDLIAPYLKVF
                     LGFIGITDVNFVFAEGIAYGPEVAAKAQADAKAAIDSVVAA"
     gene            8786..12688
                     /gene="hrpA"
                     /locus_tag="MOX77_000526"
     CDS             8786..12688
                     /gene="hrpA"
                     /locus_tag="MOX77_000526"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460600.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase HrpA"
                     /protein_id="HCA3356178.1"
                     /translation="MTEQSTLTLQVLQQRLDALMLRDKQRFSRRLHGVKKVKNPDAQQ
                     AIFQTMAKEIEQAATQVALREAARPSITYPQNLPVSQKKQDILEAVRDHQVVIVAGET
                     GSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELQTEPGGCIGYKVRF
                     SDHVSSNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLP
                     RRPDLKVIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQ
                     AIFDAVDELGRESPGDILIFMSGEREIRDTADALNKLNLRHTEVLPLYARLSNSEQNR
                     VFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQAS
                     ANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAA
                     FPFVEAPDKRNIQDGVRLLEELGAITADEQQTAYKLTPLGRQLSQLPVDPRLARMVLE
                     AQKHGCVREAMIITSALSIQDPRERPVDKQQASDEKHRRFHDKESDFLAFVNLWNYLG
                     EQQKALSSNQFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHV
                     ALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWTMVAELVETSRLWGR
                     IAARIEPEWVEPVAQHLIKRSYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQI
                     DPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDDTLFEF
                     YDQRISHDVISARHFDSWWKKISRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGN
                     LKLRLSYQFEPGADADGVTVHIPLPLLNQVDESGFEWQIPGLRRELVIALIKSLPKPV
                     RRNFVPAPNYAEALLGRVTPLELPLLDALERELRRMTGVTVDREDWHWDQVPEHLKIT
                     FRVVNDKNKKLQEGRSLAELKNALKGKVQETLSAVADDGIEQSGLHIWSFGELPESYE
                     QKRGNYKVKAWPALVDERDSVAIKLFDNPLEQQQAMWCGLRRLLLLNIPSPIKYLHEK
                     LPNKAKLGLYFNPYGKVLELIDDCIACGVDKLIDANGGPVWSEAGFTALHEKVRAELN
                     DTVVDIAKQVERILTTVFNINKRLKGRVDMSMALGLSDIKAQMSGLVYRGFVTGNGFK
                     RLGDTLRYLQAIEKRLEKLAVDPHRDREQMLKVESVQQAWQQWINKLPPARREDDDVK
                     EIRWMIEELRVSYFAQQLGTPYPISDKRILQAMDQITA"
     gene            12752..13552
                     /locus_tag="MOX77_000527"
     CDS             12752..13552
                     /locus_tag="MOX77_000527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HCA3356179.1"
                     /translation="MNTTPFPALSAETLLAVNTVGQWLAQNDFSGEQPYSSDCVVLAG
                     NAVIPTIDAACRIAKAQGVPLLISGGIGHSTPFLYAVIARHPRYHTIRTTGRAEAAIL
                     ADIANQFWHIPAEKIWLEDRSTNCGENARFSCALIRQAKENINTAIVVQDPTMQRRTI
                     AAFRRVTNDDTDAPRWLSFPGFVPVLRHLNGGTRFANVEEGIWTVERYLSLIAGELPR
                     LRDDETGYGPRGKDFIIHVDIPRDIEKAWQVLQADTTLRSALEQRALR"
     gene            13669..14199
                     /gene="cybB"
                     /locus_tag="MOX77_000528"
                     /pseudo
     CDS             13669..14199
                     /gene="cybB"
                     /locus_tag="MOX77_000528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460598.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b561"
     gene            complement(14470..15132)
                     /locus_tag="MOX77_000529"
     CDS             complement(14470..15132)
                     /locus_tag="MOX77_000529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001576082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HCA3356180.1"
                     /translation="MKHTQQSGAKVYNPFTLSLYDWWVLNISNKYAWKCPTDTRLLPF
                     FLHHMGETHLDIGVGTGYYLKHAPATHAISLMDLNPDSLKIAASRVGNTKIRATLQHD
                     VFDTFPADWHGRFDSVSMYYLLHCLPGEMTTKAKAIKNAGMALKPGGTLFGATILGKE
                     VPHNAFGKKLMAVYNKKGIFSNTNDSADTLRSVLDEHFAKVTLEQHGAVALFSATMPR
                     SL"
     gene            complement(15596..17146)
                     /locus_tag="MOX77_000530"
     CDS             complement(15596..17146)
                     /locus_tag="MOX77_000530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HCA3356181.1"
                     /translation="MALPQLSIWQPGDGLRKIKYKYHVCLIVIFSVLIRLLFLTDRYL
                     WCDEASSVLISRHSVDNLLFHAAFDVHPPLYYLLLHDWIILLGDSIAAVRSLSLLFGI
                     LTVVLVIALTRWLANERTALLAGWFAALMPMAVHYSQETRMYALMGMLTLAAALALMM
                     WIKTPTHNRYLVAYALLMTFSFYTHYFTLFTLIAHWIAVTILSCQSHKTACYLKLPGW
                     WFANLAIAVAYLPWLPVLFNLLTHLAQLRAGNDIGWIPPVTWRDLPAMYWHFFTGNNG
                     QGFPSFILWLAVGGFIGTVGRISLYNGEYERYQLILFCNLVIPVMLVFIISWWMPLFI
                     DRYFFFSSLSIPPLLAVLLTRAKKAVCGFWFILFTLLFGYGSYHNNPEHIDEFKPLVN
                     YINTRHQPNDAVVVSKMFDYLSYVYYNKRDYRTFLYTPPNAHGTSGRPNAYGFGSLFY
                     AQADQTYIDTLTTLSKSYHRVWLVSGGNFSQDYPLPSEWQNIAKFRSGRFQVQLFVIP
                     TQQARQMQ"
     gene            complement(17283..17963)
                     /locus_tag="MOX77_000531"
     CDS             complement(17283..17963)
                     /locus_tag="MOX77_000531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HCA3356182.1"
                     /translation="MIAGWSLFFNDLTEQLPLVVDGIKETCKLALIVSITGFLWGIII
                     FFLSLSHRPVVKAITRLYMDFFIGTPLILILFVIYYGLPQSGIHLSSFTVAVTGFTLN
                     VGAYNAAYMTTAYNALNKYETEAAVVQGLNKRQVFLWIILPQVLLSSIPALTNQVINN
                     LKDSTIVFLIQYTEFFARIQEVAATSFKFFHAYLFAAIVYLIGVTFIVGLTRFLEHRL
                     LRHYGQDY"
     gene            complement(17960..18691)
                     /locus_tag="MOX77_000532"
     CDS             complement(17960..18691)
                     /locus_tag="MOX77_000532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HCA3356183.1"
                     /translation="MALLELKEISKEYSGKKVLDAVSLKIQSGDMKVVMGPSGCGKTT
                     LLRCLLRLEEPDYGDIYFHGENIYDKEFTILEFRKKVGCVFQNYALYRHLNVMDNITL
                     ALCKVFGMPGQLAREKALHELQKLDMVSHSAKYPSQLSGGQQQRVALARTMVTDPELI
                     IFDEPTSALDPLMTREVGMLIKQLHDNGVTILCVTHDIRLARLLSDNVTFLNHGKIRA
                     EGAFTDLALRETDPDIHCFFSEAQR"
     gene            complement(18716..19363)
                     /locus_tag="MOX77_000533"
     CDS             complement(18716..19363)
                     /locus_tag="MOX77_000533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HCA3356184.1"
                     /translation="MSSGNMLAIFYFLLEGIGNTLLVTFTCFLSAFLTGLTVAVLRRL
                     SPLPLQKILDVLVFILRGIPILIAVFLVYFGLPSIGIYVSPLVAMNLSVGLISGSYLA
                     EVFRGALKLVEPFEITVAKVAGMRQLQVIINIELPQMLRFSVPGIINEFSSVLKATPF
                     AYTVGIAEITKQAMSLTAITLNGLQIYTLAGVLYFIIYKAFTLLAGVFEKKYRIS"
     gene            complement(19370..20131)
                     /locus_tag="MOX77_000534"
     CDS             complement(19370..20131)
                     /locus_tag="MOX77_000534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HCA3356185.1"
                     /translation="MLSKKIGLSMIVLGIMSSSAFADSIVEGRTLNVAVSPASPPMLF
                     KSADGKLQGIDLELFSSYCQSRHCKLNITEYAWDGMLGAVASGQADVAFSGISITDKR
                     KKVIDFSEPYYINSFYLVSMANHKITLNNLNELNQYSIGYPRGMAYSDLIKNDLEPKG
                     YYSLSKVKLYPTYNETMTDLKNGNLDLAFIEEPVYFTFKNKKKMPIESRYVFKNVDQL
                     GIAFKKGSPVRDDFNLWLKEQGPQKISGIVDNWMK"
     gene            21049..21393
                     /locus_tag="MOX77_000535"
     CDS             21049..21393
                     /locus_tag="MOX77_000535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1294 domain-containing protein"
                     /protein_id="HCA3356186.1"
                     /translation="MYLNRFCYLLLISAAVGSIFTSYPVAMWFLLANVLTLAIYGVDK
                     TAARKTWRRVPESTLLVFGVVGGWPGAIVGQQLFRHKTQKQPFKTYFIASVIVSIVVT
                     VAIYRLYPFLSY"
     gene            complement(21514..21654)
                     /locus_tag="MOX77_000536"
                     /pseudo
     CDS             complement(21514..21654)
                     /locus_tag="MOX77_000536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460590.1"
                     /note="involved in bacterial survival in the host cell;
                     incomplete; partial in the middle of a contig; missing
                     N-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pathogenicity island 2 effector protein SseJ"
     gene            21655..22755
                     /locus_tag="MOX77_000537"
                     /pseudo
     CDS             21655..22755
                     /locus_tag="MOX77_000537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460583.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
     gene            22804..24312
                     /locus_tag="MOX77_000538"
     CDS             22804..24312
                     /locus_tag="MOX77_000538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylesterase/lipase family protein"
                     /protein_id="HCA3356187.1"
                     /translation="MLNPSIPLVATRHGKIVGVVQEEIHIWRGIPYAAPPTGELRWRA
                     PQPVTPWQDVRQADCFSCASWQDITWCRELGGGDPGNFSEDCLYLNVWAPAVRHEPLP
                     VMVWLHGGGYTIGAGSLPPYDGQALAKRGAIVVTVNYRLGHLGFFAHPALEGEGAECI
                     HNFALLDQIAALRWVQDNIAAFGGDTQNVTLFGESAGARSVLSLMASPLAKGLFHKAI
                     IQSGYTLPDTPREVALKKGVALAEHLGLAHATAEQLRALPAETFWPLDAPFKIAPTPI
                     SGDVVLPHPMLETFFAAKQHPIPVMIGSNSDEASVLAVFGVDIAGQIQKMRRERRVGL
                     GLIRLLYPGVKGDEALGRQVCRDMVFTTLGYVVMQAQKRIGEPCWRYWFDYVAEAEHN
                     TYANSACHGNEIPYVFDTLTRAEPTCHYVNENDLAFASQVADYWVNFARHASRTRDVL
                     HGPVRWPASIRGRDRLLRIGLNKLAGFKVENRFMRARLALFKRVMKHHVSLE"
     gene            24532..26187
                     /locus_tag="MOX77_000539"
     CDS             24532..26187
                     /locus_tag="MOX77_000539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucan biosynthesis protein"
                     /protein_id="HCA3356188.1"
                     /translation="MNRRRFIKGSMAMAAVCGSSGIASLFSQAAFAAESDIADGKIVR
                     FDFAGLQSMAQALAKKPWGGAPGPLPDTLANLTPQAYNSIQYDAAHSLWNGVANRQLD
                     IQFFHVGMGFRRRVRMFSVDTTTHLAREIHFRPELFKYNDAGVDTTQLEGQSDLGFAG
                     FRVFKAPELARRDVVSFLGASYFRAVDDTYQYGLSARGLAIDTYTDGQEEFPDFTAFW
                     FDTAKPGDTTFTVYALLDSASVTGAYKFVIHCEKTQVIMDVENHLYARKDIKQLGIAP
                     MTSMFSCGNNERRVCDTIHPQIHDSDRLAMWRGNGEWICRPLNNPQKLQFNAYMDDNP
                     KGFGLLQLDRDFSHYQDVMGWYNKRPSLWVEPRSKWGKGAVSLMEIPTTGETLDNVVC
                     FWQPEKAIKAGDTLAFNYRLYWSAQPPVQSPLARVMATRTGMGGFPEGWAPGEHYPDK
                     WARRFAIDFVGGDLKAAAPKGIEPVITLSSGEAKQVEILYVEPFDGYRIQFDWYPTSD
                     STAPVDMRMFLRCQGEAISETWLYQYFPPAPDKRRYVDDRIMR"
     gene            26383..26958
                     /locus_tag="MOX77_000540"
     CDS             26383..26958
                     /locus_tag="MOX77_000540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyisoprenoid-binding protein"
                     /protein_id="HCA3356189.1"
                     /translation="MNIMKKSFLGALLSLGLLSAAHADVYKFDNTHTNAVFNIDRFQT
                     STNHGGFYAISGELKYQPEKQVAEMRVTIPVSALNTGVDAFDNHIRSSDILDAEKYPE
                     IVFKSTKWHFEDNKPVSIDGLLTMKGVTKPVTLTTTKFGCYMSPIFKAQVCGGDFVTQ
                     IDRTQWGVDYLVDMGMTKVVDIKIQAEAVKQ"
     gene            26970..28172
                     /locus_tag="MOX77_000541"
     CDS             26970..28172
                     /locus_tag="MOX77_000541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycolate oxidase"
                     /protein_id="HCA3356190.1"
                     /translation="MKTHHLIRVVASLAMLATSGLAYAEEYKASTDEKAIKMTNVASL
                     EARVQARMEKGAFGYIRGGAEDENNLRSNTESFDKKYIMPRVLQGIELKEIDLSTQLL
                     GIPLKTPIIQAPMAAQGLAHASGELATAKGMAQVGSIFSLSTYGNKTIEEVANVSGKN
                     PFFFQLYMSKNNQFNEFILAQAVKHGAKAIILTVDSPVGGYREEDIKNNFQFPLSFAN
                     LEMFARKNDDGSKTGKGAGISEIYAQAKQAFTPEDIAYVHRISGLPVIVKGIQSPEDA
                     EIAIQAGAAGIWVSNHGGRQLDSGPSSFDMLPAIAKVVNKRVPVIFDSGVRRGSHVFK
                     ALASGADIVAVGRPVLYGLNLGGAQGVASVIEQLNKELTINMMLGGARNIEQVKTTRL
                     LTEKDLPQ"
     gene            complement(28230..28664)
                     /gene="aac(6')"
                     /locus_tag="MOX77_000542"
                     /pseudo
     CDS             complement(28230..28664)
                     /gene="aac(6')"
                     /locus_tag="MOX77_000542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460578.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cryptic aminoglycoside N-acetyltransferase
                     AAC(6')-Iy/Iaa"
     gene            complement(28664..29455)
                     /locus_tag="MOX77_000543"
     CDS             complement(28664..29455)
                     /locus_tag="MOX77_000543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HCA3356191.1"
                     /translation="MSQQRPDRIKQMLHYLWQHRHLSTQQAIELFGYAEATVRRDFHY
                     IASRYPGMVRGHGCIDFDDSTEDKEYVFDVKRTLQSEAKREIAALARTFIKDGDCFFL
                     DSGSTCLELAKCLVDAKVKVICNDIKIANELGGFPHVESYIIGGLIRPGYFSVGESLA
                     LEMINAFAVERAFISCDALSIETGITNATMFEVGVKTRIIQRSREVILMADHSKFDTV
                     EPHAVATLSCITTILSDSALPSAIARRYQQAGCRLIMSDPSSGAR"
     gene            complement(29471..30103)
                     /locus_tag="MOX77_000544"
     CDS             complement(29471..30103)
                     /locus_tag="MOX77_000544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3 epimerase family protein"
                     /protein_id="HCA3356192.1"
                     /translation="MILHPSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNIT
                     FGMKTIQAVAQYSRHPLSFHLMVSSPQRWLPWLAAIRPGWIFIHAESVQNPSEILADI
                     RAIGAKAGLALNPATPLLPYRYLALQLDALMIMTSEPDGRGQQFIAAMCEKVSQSREH
                     FPAAECWADGGITLRAARLLAAAGAQHLVIGRALFTTANYDVTLSQFTAL"
     gene            complement(30115..30552)
                     /locus_tag="MOX77_000545"
     CDS             complement(30115..30552)
                     /locus_tag="MOX77_000545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HCA3356193.1"
                     /translation="MINDVKWVQAQRHASDWRHALDIAVRPLITFGAAAPCYLDGIIE
                     NTLKWGPYYLIAPGIALPHARPEQGANHNQISVTTLSTPVAFGNADCDPIWLLLCASA
                     TDAEAHIRTIQRISQWLDSPESVAMLQDAPNDAALFAQLTALR"
     gene            complement(30684..31490)
                     /gene="sgcQ"
                     /locus_tag="MOX77_000546"
     CDS             complement(30684..31490)
                     /gene="sgcQ"
                     /locus_tag="MOX77_000546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BtpA family protein SgcQ"
                     /protein_id="HCA3356194.1"
                     /translation="MSWLKEVIGTEKAVIAMCHLRALPGDPGFDTRKGMNWVIDRAHD
                     DLMALQNGGVDAVMFSNEFSLPYLTKVRPETTAAMARIIGQLMSEIRVPFGVNVLWDP
                     VASFDLAMATDAKFIREIFTGAYASDFGVWDTNVGETIRHQHRIGAGHVKTLFNIVPE
                     AAVYLGNRDVCSIAKSTVFNNNPDALCVSGLTAGARTDSAILKRVKDTVPDTVVLANT
                     GVCLENVEEQLCIADGCVTATTFKKDGVFANFVDQARVAKFMEKVRHIRQ"
     gene            complement(31504..32817)
                     /locus_tag="MOX77_000547"
     CDS             complement(31504..32817)
                     /locus_tag="MOX77_000547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HCA3356195.1"
                     /translation="MFDYILSLGGTVFVPIIMIIIGLIFRIPWLQAVKAGVTVGIGFV
                     GMGLVIVMAIDSLSPPIKVMIERFGLTLHVFDVGAGPASGVGYATAIGAMIIPVIFLL
                     NVGMLVTRLTKTMNVDIYNYWHYAITGTVVQLMTGSLIYGVLGAICHAALSLKMADWT
                     TKRVQNIVGLEGISIPQGYGSSSVPLFVLLDAIYEKIPFMKGRNIDAQEIQKRYGMVG
                     DPVIIGVVLGLIFGLAAGEGFKGCATLMITVAAIMVLFPRMIRLIVEGLMPISDGARK
                     FFQKHFKGREVFIGLDTAVTLGHPTTIAVGLLLIPIMLILASILPGNKVLPLADLPVA
                     PFFICMATVIHRGDLIRTLLSGIIVMITVLLIATQFAPYFTDMALKGGFSFAAENAQI
                     TALSVGNMFGWSISELMSLGMIGVVIVVGIVASIILVLRKRELPE"
     gene            complement(32828..33109)
                     /locus_tag="MOX77_000548"
     CDS             complement(32828..33109)
                     /locus_tag="MOX77_000548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HCA3356196.1"
                     /translation="MMKKILVACGTGMSTSTMIAQKLQDFLAEQGIAATTAQCCLNEI
                     PLNCNGMDLIVTSMRTHSDYGIPTLNGAALLTGINDDALKQEIKALLTQ"
     gene            complement(33106..34224)
                     /locus_tag="MOX77_000549"
     CDS             complement(33106..34224)
                     /locus_tag="MOX77_000549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M42 family metallopeptidase"
                     /protein_id="HCA3356197.1"
                     /translation="MTFSVQETLFSLLRLNGISGHESSIANVMQHAFEQQAKDVWRDR
                     LGNVVARYGSDKSDALRLMIFAHMDEVGFMVRKIEPSGFLRFERVGGPAQITMPGSIV
                     TLAGCSGDIMGCIGIKAYHFAKGDERTQPPALDKLWIDIGAKDKADAERMGIQVGTPV
                     TLYNPPHCLGNDLVCSKALDDRLGCTALLGVAEALASTPLDIAVFLVASVQEEFNIRG
                     IVPVLRRVRPDLAIGIDITPSCDTPDLQDYSDVRVNHGVGITCLNYHGRGTLAGLITP
                     PRLLRMLETTAHENNIPVQREVAPGVITETGYIQVELDGIPCASLSIPCRYTHSPAEV
                     ASLRDLADCIRLLTALANMSPEQFPIDPETGATQEARP"
     gene            34441..34980
                     /gene="rimL"
                     /locus_tag="MOX77_000550"
     CDS             34441..34980
                     /gene="rimL"
                     /locus_tag="MOX77_000550"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12-serine
                     acetyltransferase"
                     /protein_id="HCA3356198.1"
                     /translation="MVEIIPVSTTLELRAADESHVPALHQLVLKNKAWLQQSLDWPQY
                     VTSQEETRKHVQGNMLLHQRGYAKMYLIFCQDEMAGVLSFNAIEPINKAAYIGYWLDE
                     SLQGQGIMSQSLQALMTHYARRGDIRRFVIKCRVDNQASNAVARRNHFTLEGCMKQAE
                     YLNGDYHDVNMYARIIDAD"
     gene            complement(34977..35957)
                     /locus_tag="MOX77_000551"
     CDS             complement(34977..35957)
                     /locus_tag="MOX77_000551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356199.1"
                     /translation="MIKYRLSEEPRAFTYQVDGEKKSVLLRQVIAVTDFNDVKAGTSG
                     GWVDADNVLSQQGDCWIYDENAMAFAGTEITGNARITQPCTLYNNVRIGDNVWIDRAD
                     ISDGARISDNVTIQSSSVRGECAIYGDARVLNQSEILAVQGLTHEHAQILQIYDRATV
                     NHSRIVHQVQLYGDATITHAFIEHRAEVFDFALIEGNKDNNVWICDCAKVYGHARVIA
                     GTEEDAIPTLRYSSQVAEHALIEGNCVLKHHVLVGGHAEVRGGPILLDDRVLIEGHAC
                     IQGEILIERQVEISGRAAVIAFDGNAIHLRGPKVINGEDRITRTPLVGSL"
     gene            36064..37077
                     /gene="tehA"
                     /locus_tag="MOX77_000552"
     CDS             36064..37077
                     /gene="tehA"
                     /locus_tag="MOX77_000552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dicarboxylate transporter/tellurite-resistance
                     protein TehA"
                     /protein_id="HCA3356200.1"
                     /translation="MCNHKQSDRVLNLPAGYFGIVLGTIGMGFAWRYASQIWAISHWP
                     GDIMVILAMIIWALLTLAFLSRLVRFPHSVMAEVRHPVMSSFVSLFPATTMLVAIGFV
                     PWYRPLAVALFSVGVVIQLAYAAWQTAGLWRGAHPEEATTPGLYLPTVANNFISAMAC
                     GALGYNDAGLVFLGAGVFSWLSLEPVILQRLRSCGELPAVLRMSLGIQLAPALVACSA
                     WLSVNGGEGDTLAKMLFGYGLLQLLFMLRLMPWYLSQPFNASFWSFSFGVSALTTTGL
                     HLGHGSESGFFHILAVPLFIFTNAIIALLLVRTFLLLVQGTLLIRTERAALLKTEEKN
                     DRS"
     gene            37064..37660
                     /gene="tehB"
                     /locus_tag="MOX77_000553"
     CDS             37064..37660
                     /gene="tehB"
                     /locus_tag="MOX77_000553"
                     /EC_number="2.1.1.265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance methyltransferase TehB"
                     /protein_id="HCA3356201.1"
                     /translation="MTVRDENYFTEKYGLTRTHSDVLAAAKVVAPGRTLDLGCGNGRN
                     SLYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLTFDGEYDFILST
                     VVMMFLEAQTIPGLIANMQRCTKPGGYNLIVAAMDTPGFPCTVGFPFAFKEGELRRYY
                     EGWDMLKYNEDVGELHRTDENGNRIKLRFATMLARKTA"
     gene            37816..38484
                     /locus_tag="MOX77_000554"
                     /pseudo
     CDS             37816..38484
                     /locus_tag="MOX77_000554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460566.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3313 domain-containing protein"
     gene            complement(38538..39716)
                     /locus_tag="MOX77_000555"
     CDS             complement(38538..39716)
                     /locus_tag="MOX77_000555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="benzoate/H(+) symporter BenE family transporter"
                     /protein_id="HCA3356202.1"
                     /translation="MRLLSLPLPTVLSGLVAVLVGYASSAAIIWQAALAAGATPAEIA
                     GWMTALGIAMGISTLTLTLWYRAPVLTAWSTPGAALLVTGLQGLSLPDAVGIFIVANA
                     LIVLCGVTGLFARLMRIIPHSLAAAMLAGILLRFGLQAFGTLNGEFVMCGGMLLAWLL
                     FKVFAPRYAVIAAMVMGITVALIQGKMAMSGIHFAPVWPTFVPPHFSFAQSLSVAVPL
                     FLVTMASQNAPGVATMKASGYQLPVSPLMIFTGLLALLLSPFGVYSICIAAITAAICQ
                     SPDAHPDPTRRWLAAAAAGVFYLLAGWFGGSITELMVALPVSWVQMLAGLALLSTISG
                     SLYQALTHESERDAAVIAFLVTASGLTLMGIGSAFWGLIAGGIGYAILTRTRRPSLSG
                     "
     gene            39808..40344
                     /locus_tag="MOX77_000556"
     CDS             39808..40344
                     /locus_tag="MOX77_000556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HCA3356203.1"
                     /translation="MDNLTHYLATTLRTLRHQRGWSLSRLAEISGVSKAMLGQIERNE
                     SSPTVATLWKIATGLNVPFSMFISPPQAEFPPTFDPQQQAMVITPLFPWDPELCFDYF
                     SLLLAPGAVSESTPHKAGVIEHVVVIQGRLDMCTGGVWQTIDAGKGLRFAGDTAHTYR
                     NSSDQTVHFHSLIHYPRD"
     gene            40423..42387
                     /locus_tag="MOX77_000557"
     CDS             40423..42387
                     /locus_tag="MOX77_000557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HCA3356204.1"
                     /translation="MRQQPHYLELLSPARDAAIAREAILHGADAVYIGGPGFGARHNA
                     SNSLRDIADLVPFAHRYGARIFVTLNTILHDDELEPAQRLITDLYNTGVDALIVQDMG
                     ILELDIPPIELHASTQCDIRSVEKAKFLADVGFSQIVLARELNLSQIAAIHQATDATI
                     EFFIHGALCVAYSGQCYISHAQTGRSANRGDCSQACRLPYTLKDDQGRVVSYEKHLLS
                     MKDNDQTANLGALIDAGVRSFKIEGRYKDMSYVKNITAHYRQMLDAIIEQRGDLARAS
                     VGRTEHFFVPSTEKTFHRGSTDYFVNARKGDIGAFDSPKFIGLPVGEVLNVAKDYLDV
                     EATEPLANGDGLNVLIKREVVGFRANTVEKTGHNRYRVWPNDMPADLHKVRPHHPLNR
                     NLDHNWQQALTKTSSERRVAVDIMLGGWQEQLILTLTSEDGVCITHTLDGVFEEANNS
                     EKALNNLTAGLAKLGQTLYYARDMQVTLPAALFVPNSLLNQFRREAIDMLDAARLAHY
                     QRGRRKPVAQPAPVYPQTHLSFLANVYNHKAREFYHRYGVQLIDAAYEAHQEKGEVPV
                     MITKHCLRFAFNLCPKQAKGNIKSWKATPMQLVHGDEVLTLKFDCRPCEMHVIGKIKN
                     HILKMPQPGSVVASVSPEALMKTLLKRRGV"
     gene            complement(42388..42618)
                     /locus_tag="MOX77_000558"
     CDS             complement(42388..42618)
                     /locus_tag="MOX77_000558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2554 family protein"
                     /protein_id="HCA3356205.1"
                     /translation="MLTKTLSVVLLTCALFSGQLLAKQQDHAFVWFATGGHQLRHEAD
                     SDELRAAAEESAEGLREHHNWQKSRKPESYFR"
     gene            complement(42892..43842)
                     /gene="sifB"
                     /locus_tag="MOX77_000559"
     CDS             complement(42892..43842)
                     /gene="sifB"
                     /locus_tag="MOX77_000559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-2 type III secretion system effector SifB"
                     /protein_id="HCA3356206.1"
                     /translation="MPITIGRGFLKSEMFSQSAISQRSFFTSLWEKIKDFFCDTQRST
                     ADQYIKELCDVASPPDAQRLFDLFCALYELSSPSCRGNFHFQHYKDAECQYTNLCIKD
                     GEDIPLCIMIRQDHYYYEIMNRTVLCVDTQSAHLKRYSDINIKASTYVCEPLCCLFPE
                     RLQLSLSGGITFSVDLKNIEETLIAMAEKGNLCDWKEQERKAAISSRINLGIAQAGVT
                     AIDDAIKNKIAAKVIENTNLKNAAFEPNYAQSSVTQIIYSCLFKNEILMNMLEESSSH
                     GLLCLNELTEYVALQIHNSLFSEDLSSLVETTKNEAHYQS"
     gene            44371..44769
                     /locus_tag="MOX77_000560"
     CDS             44371..44769
                     /locus_tag="MOX77_000560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine dipeptidase"
                     /protein_id="HCA3356207.1"
                     /translation="MKKSDGEIHEKTASWGILQSEWLRKCGRLLLLLLYRFVIGWAFF
                     QLLAMIVAGIFLLGVLLFHPIIFVQTIAITEKLNHASLDLWHILKLCLWHYGIIAGFI
                     FMAECTLSKSIRQVQRLSKKFGAQDFSSRP"
     gene            44802..45032
                     /locus_tag="MOX77_000561"
     CDS             44802..45032
                     /locus_tag="MOX77_000561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_448018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356208.1"
                     /translation="MAMTSRPNYLGSRGILCVCTTAVNRNFSALSPTIDVFLTNCLPD
                     YIVVLSLAKQCYLVMEGDNNCTIDYQISFLVR"
     gene            45295..46065
                     /locus_tag="MOX77_000562"
     CDS             45295..46065
                     /locus_tag="MOX77_000562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M15 family metallopeptidase"
                     /protein_id="HCA3356209.1"
                     /translation="MVKCVSSFLLFSLLSVQAISAENHIDLHQPKDFVDITTVAPDVQ
                     VDMRYFTSHNFIGRPIKGYNAPVCLLTRPAANAVKQVADRLRPFGLTLKIYDCYRPQS
                     AVNDFIAWAKDPSQNQMKNEFYPQVEKNRLFEEGYLAARSGHSRGSTLDLTIVPLDSK
                     IPIYHPGRPLVNCTASAAQRSPDNSLDFGTGFDCFSPLSHPDNVMLTAQQRANRLLLQ
                     TLMRDAGFTPLDTEWWHFSLTHEPYPNTWFDFPVKQRP"
     gene            46201..47625
                     /locus_tag="MOX77_000563"
     CDS             46201..47625
                     /locus_tag="MOX77_000563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HCA3356210.1"
                     /translation="MKKYQRLAEQIREQIASGVWQPGDRLPSLREQVASSGMSFMTVG
                     HAYQLLESQGRIIARPQSGYYVAPHPVCRSVATAAHVIRDEAVDINTYIFEMLQASRD
                     TSVVPFASAFPDPRLFPLPQLNRSLAQVSKTETAMSVIENLPPGNAELRYAIARRYAQ
                     QGITVSPDEIVITAGALEALNLSLQAVTAPGDWVVVENPCFYGALQALERLRLKALSI
                     PTDVKEGIDLMALEQALQEYPVKACWLMTNSQNPLGFTLSAEKKARLVALLTHHNVTL
                     IEDDVYSELYFGREKPLPAKAWDRDDTVLHCSSFSKCLVPGFRIGWVAGGSHARQIQR
                     LQLMSTLSTSSPMQLALVDYLSTRRYDAHLRRLRRQLAERKQQAWQTLLRHLPAEVKI
                     HHNDSGYFLWLELPEQLDAGELSAKALEHLISIAPGKMFSTSGAWTRFFRFNTAWHWG
                     EREEQAVKQLGSLIREMLSAKSLV"
     gene            47740..49185
                     /gene="patD"
                     /locus_tag="MOX77_000564"
     CDS             47740..49185
                     /gene="patD"
                     /locus_tag="MOX77_000564"
                     /EC_number="1.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460556.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminobutyraldehyde dehydrogenase"
                     /protein_id="HCA3356211.1"
                     /translation="MTIWENAMQYQLLINGVLVDGEGERQSVYNPATGEVILEIAEAS
                     PVQVDAAVLAADSAFAEWGQTTPKARAECLLKLADSIEQNALEFARLESQNCGKPLHC
                     VINDEIPAIVDVFRFFAGAARCLSGLAAGEYLEGHTSMIRRDPIGVVASIAPWNYPLM
                     MAAWKLAPALAAGNCVVIKPSEITPLTALKLAALAKDIFPPGVLNVLFGRGQTVGDVL
                     TGHEKVRMVSLTGSIATGEHILRHTAPAIKRTHMELGGKAPVIVFDDADLDAVAQGVR
                     TFGFYNAGQDCTAACRIYAQRGIYDALVEKLGNAVSSLKMGAPEDKSTELGPLSSLAH
                     LKRVTAAVEEAKALSHIRVITGGSQTEGKGYYFAPTLLADAKQEDAIVQREVFGPVVS
                     ITVFDDEDQVLRWANDSRYGLASSVWTQDVGRAHRLSARLQYGCTWINTHFMLVSEMP
                     HGGQKQSGYGKDMSLYGLEDYTLVRHIMVKH"
     gene            complement(49290..49385)
                     /gene="yncL"
                     /locus_tag="MOX77_000565"
     CDS             complement(49290..49385)
                     /gene="yncL"
                     /locus_tag="MOX77_000565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001103198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response membrane protein YncL"
                     /protein_id="HCA3356212.1"
                     /translation="MNVSSKTVVLINVFAAAGLLGLISLRFGWFA"
     gene            49523..49621
                     /locus_tag="MOX77_000566"
     CDS             49523..49621
                     /locus_tag="MOX77_000566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001173343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GhoT/OrtT family toxin"
                     /protein_id="HCA3356213.1"
                     /translation="MSNKKSILRAFFPLVGATWPISFPVALLFSLF"
     gene            complement(49666..51813)
                     /locus_tag="MOX77_000567"
     CDS             complement(49666..51813)
                     /locus_tag="MOX77_000567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence effector SrfC"
                     /protein_id="HCA3356214.1"
                     /translation="MTKPLNATQAVIEWVNNTRRYATRLDDEADALLAQLTLAAADES
                     ALNAACASSHGCVGLYGYAQSAKAHLLTTLCGNENGKLEIITPDRDYDYFSHINPGHA
                     PANMAIRFTRDIFSNESGWPLRLRLISEAELVQIFIAWTSSSPVCRQVEKSIITSRLE
                     KWQSLRQPQPVPGVTAEEVATIASFWRSCLPSARQHIDDATWQHFASLLPALDLTTRA
                     HAWALLWGEQPEITQQWLALAHMLQQTGHAGELAAPLSLLVDHFGLPAENFLTQMALT
                     ASDTQSDVVVHPVKEGRLLNAVSLSLDSLALLTRELVLTVENSVLDNVDLLDIPVAPD
                     SHPHPLWRAKLGWMLAHYRQQIQPDVLVICNALASRSQTSTAARHLLEWVNATQPQHE
                     SALPGVVWAITPQDARFATQQNLDEAVQQLMGKPGVHWGTLQALDKHSMQRLVEWLSQ
                     ATSAPQRQARLQALREQLRGRVRDLLPMCDDARLPVETVIRRLQAQAARHGDLLAGLL
                     PPVQNFEALLRTRQSREEQVSGLFNDAIDLFADEPTHASASEGHETGYQAHKMWINHL
                     RQWAHCRDNAQRLGLEPQMLNAVAEILITASYRLGLPQQLQKTMQREEVSGAQLHAII
                     GNFIAWLGYANIEEAQRPASRVQKGAAIFAATPRSTMLRLTKLDEQPVHAASRYVYDW
                     LVALYTLANENAGYRHPQDVTDVDRAQLIALIA"
     gene            complement(51810..54791)
                     /locus_tag="MOX77_000568"
     CDS             complement(51810..54791)
                     /locus_tag="MOX77_000568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence factor SrfB"
                     /protein_id="HCA3356215.1"
                     /translation="MLVNLCDYKQSVTLIANSGVQFLDFGLTPQESAHYGRFVRKTAN
                     GPLLRLDFDLTSGRYTLPGRAGGQPEVVKPESTQTLHYSLDVLDGIWLPLPFLRFNPP
                     RTFIDGPDNWARIQVRKLSEPDSAGNTHRITLAFDSQLAKNMPAALAPCENDLLNGTR
                     FALAWRDEEVADFLDQTWIDGWLRESFLQYASQVENRPEQAIQQALRSFEYQAHWLNL
                     LTLLGEQLTVPEVKFVTHTLSTPAIPVDLILDVGNTHTCGVLIEDHGDANDGLRQTAE
                     LQVRSLSEPQYLNDPLFTSRVEFSEARFGKQHFSVESGRDDAFVWPSIVRVGDEARAL
                     AMQRVGTEGSSGISSPRRYLWDETPALQDWRFSQIHGKTQREPLATAFPLMNLMNDDG
                     QPLFRLPHEERLPVFSPQYSRSTLMTHMLCEILAQALGQINSVATRLRLGFPASPRQL
                     RTLILTLPSAMPKQEREIFRQRMFEALALVWKAMGWHPQDEDFTTPKQREKSVVPVPE
                     IQMEWDEASCGQLVWLYNEAISHYAGRTESFFNALARPDRQPEPGVVPGRALRVASID
                     IGGGTTDMAIVHYQLDDGVGANVKITPHLLFREGFKVAGDDLLLDIIQRCVLPSLQTA
                     LQRAGVTDAAALLATLFGDSGRIDTQAILRQQTALQLFMPLGHAVLSAWEQSDINDPF
                     AGLHATFGDLLIRRPTSNVMNYIQQAIDHALPSGSPTFDIFNVPLQIQFSQLQEALLA
                     GQFTLTTPLHAVCEAISHYHCDILLVTGRPTCLPGVQALIRHLQPVPVNRIVWMDKYQ
                     VHEWYPFSQQGRIGNPKSTAAVGAMLCSLALDLRLPRFNFKAADIGAYSTVRYLGVLD
                     NTVNTLRDENIWYHEIDLDKPGATLDARLHFPLRGNVTLGFRQLANSRWPATPLYCLS
                     INSAELAKTIAGDGVLNVRLKLRGSSKDSAPESFILSDAWLQDGTPVAADALTLKLNT
                     LADRRHSGSHYWIDSGSVYLK"
     gene            complement(54796..56121)
                     /locus_tag="MOX77_000569"
     CDS             complement(54796..56121)
                     /locus_tag="MOX77_000569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ssrAB-activated protein"
                     /protein_id="HCA3356216.1"
                     /translation="MAKSLLRSGNLDDYQAVGGGGQAVFESALQIRETLRLRKQQTMV
                     DCLAIPQLNDNGDRVDWYSPIEGQAIAWKAADEETRSRALRYLASTFESAAALSRKSL
                     QSGKTALQLFGSLLEKATQFPGENHVFLVNGKPVITFWGFVNLNENTRDDVLDCLRVT
                     EAISDIPLVEPEPQPEEKPLVEAAFSQADEPLLTSVIEPPKMPEEPAAPPVIVSEPKP
                     AAPIPVAEAKRARRLPLWSLPVAAVVIAAVATPFFWPSSSVDGASPVRTAPVATAKTD
                     VTPMPELTAHLPLHRAEVTSAPKAAPLPEAPVIIAAIPKDALVMDNTQMKLGTTRFLN
                     GSWRVSVDVKDPITGKPPSLRYQIQNNKGIARVVHGDNVVCRAEIFSGLHQTGELMIK
                     SRGNARCTDGSRYPMPEITCKAGVNDVATCTARYGDHAAIPLTFKKIGA"
     gene            56345..56578
                     /locus_tag="MOX77_000570"
     CDS             56345..56578
                     /locus_tag="MOX77_000570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2526 family protein"
                     /protein_id="HCA3356217.1"
                     /translation="MSHLEEVSARVDAAIAESVIAHMNELLIALSDDAELRHEDRYVQ
                     QQRLRTAIAHHGRQYQEDRDARREQLTKGGTIL"
     gene            complement(56583..57032)
                     /locus_tag="MOX77_000571"
     CDS             complement(56583..57032)
                     /locus_tag="MOX77_000571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HCA3356218.1"
                     /translation="MNQSLTLIFLIAAGVGLVVQNSIMVRITQTSSTILIAMLLNSLV
                     GIVLFVTILWFKQGATGFGELVASVRWWTLIPGLLGSFFVFASISGYQNVGAATTIAV
                     LVASQLIGGLALDIARSHGVTLRAMVGPAFGALLLVIGAWLIAKRQF"
     gene            complement(57032..57547)
                     /gene="mddA"
                     /locus_tag="MOX77_000572"
     CDS             complement(57032..57547)
                     /gene="mddA"
                     /locus_tag="MOX77_000572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-methionine sulfoximine/L-methionine sulfone
                     acetyltransferase"
                     /protein_id="HCA3356219.1"
                     /translation="MTIRFADKADCAAITEIYNRAVLHTAAIWNDRTVDTDNRLAWYE
                     ARQLLGYPVLVSEENGVVTGYASFGDWRSFDGFRYTVEHSVYVHPAHQGKGLGRKLLS
                     RLIDEARRCGKHVMVAGIESQNAASIRLHHSLGFTVTAQMPQVGVKFGRWLDLTFMQL
                     QLDEHAAPDAC"
     gene            57759..58796
                     /locus_tag="MOX77_000573"
     CDS             57759..58796
                     /locus_tag="MOX77_000573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001517827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent oxidoreductase"
                     /protein_id="HCA3356220.1"
                     /translation="MKQQTNRNRRWVLASRPHGAPQMDNFRLEEDDVATPGEGQVLLR
                     TVFLSLDPYMRGRMSDEPSYAPPVEPGCVMVGGTVSRVVASNHPDYRPDEWVLSYNGW
                     QDYDISDGEGLVKLGDNPQHPSWSLGVLGMPGFTAYMGLLDIGQPKEGETLVVAAATG
                     PVGATVGQIGKLKGCRVVGIAGGAEKCRHATDVLGFDLCLDHHADNFPQQLAQACPQG
                     IDIYYENVGGKVFDAVLPLLNTSARIPLCGLVSGYNATTLPDGPDRLPLLMATLLKKR
                     IRLQGFIINQDYGHRIHEFQQEMGRWIKEGKIHYREQITDGLENAPEAFIGLLAGKNF
                     GKVVIRLADDA"
     gene            59130..59795
                     /gene="mcbR"
                     /locus_tag="MOX77_000574"
     CDS             59130..59795
                     /gene="mcbR"
                     /locus_tag="MOX77_000574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid/biofilm transcriptional regulator
                     McbR"
                     /protein_id="HCA3356221.1"
                     /translation="MPGTEKTQHISLTTQVENRLKHQLSIGALKPGARLITKNIAQEL
                     GVSITPVREALLRLVSSSALAVAPAQAFMVPEISLESLLEINTIRTALEEMAVVAAAG
                     KITPDREQTLNALLDEFQQALESGVMEKILLANRAFRFEIYHYADMPTLYAMIEQLWV
                     RLGPSLHFLYDNFKLDDYQNGVNLYRKLLNALVTGDKEASRHCLQNVLQQNVATIKNQ
                     YFM"
     gene            complement(59851..61971)
                     /locus_tag="MOX77_000575"
     CDS             complement(59851..61971)
                     /locus_tag="MOX77_000575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HCA3356222.1"
                     /translation="MKIISVRQRLYPALLLPLTFSPVLQAASAPNEQTMIVTATPQTV
                     SELDTPAAVSVIEGEDMRLATPRVNLSESLTSVPGLQVQNRQNYAQDLQISIRGFGSR
                     SAFGVRGIRLYVDGIPATMPDGQGQISNIDINSIQNVEVLRGPFSALYGNASGGVINV
                     TTETGRQPPTLEASSYYGSYGSWRYGLKATGAMGDGTQPGDVDYTVSTTRFTTHGYRD
                     HSGARKNLANAKLGVRLDDVSKLSLIFNSVDIKADDPGGLTESEWKADPQQAPRAEQY
                     NTRKTIKQTQAGLRYERQLSAQDDISVMAYAGERETTQYQSIPLVAQLKPAQAGGVIT
                     LQRHYQGIDSRWTHRGELGVPVTFTGGLNYENMSENRKGYNNFRLNNGTPEFGHKGDL
                     RRDERNLMWNVDPYLQTQWQLTQKLSLDAGVRYSSVWFDSNDHYIAPGNGDDSGDASY
                     HHWLPAGSLKYALTDAWNLYLAAGRGFETPTINELSYRADGQSGFNFDLKPSTNDTVE
                     VGSKTRIGNGLLTAALFQTDTDDEIVVASSMGGRTTYKNAGKTRRQGAELALDQRFAG
                     DWRVKASWTWLDATYRSNVCQGQNCDGNRMPGIARNMGFASLGFIPDEGWYAGTDVRY
                     MGDIMANDENTAKAPSYTVVGLNTGYKFNYSQLTVDIFGRVDNLFDEEYIGSVIVNES
                     NGRYYEPAPGRNYGVGINLAWQFE"
     gene            62235..63296
                     /locus_tag="MOX77_000576"
     CDS             62235..63296
                     /locus_tag="MOX77_000576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YncE family protein"
                     /protein_id="HCA3356223.1"
                     /translation="MHLRHLFSPRLRGSLLLGSLLVASSFSTLAAEDMLRKAVGKGAY
                     EMAWSQQENALWLATSQSRKLDKGGVVYRLDPVTLEITQAIHNDLKPFGATINAATQT
                     LWFGNTINSAVTAIDAKTGDVKGRLVLDARKRTEEVRPLQPRELVADAATNTIYISGV
                     GKESAIWVVDGETIKLKTTIENTGKMSTGLALDSKAQRLYTTNADGEFITIDTASNKI
                     LSRKKLLDDGKEHFFINLSLDTAGHRAFITDSKATEVLVVDTRNGNILAKIAAPASLA
                     VLYNPTRNEAYVTHRQAGQVSVIDAKTYNVVKTFDTPTYPNSLALSADGKTLYVSVKQ
                     KSTREQEATQPDDVIRIAL"
     gene            63441..63662
                     /locus_tag="MOX77_000577"
     CDS             63441..63662
                     /locus_tag="MOX77_000577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgdI/YgdR family lipoprotein"
                     /protein_id="HCA3356224.1"
                     /translation="MKKLFICSGLGMMFFMLAGCTTNYVMTTKNGQTIVTQGKPQLDK
                     ETGMTSYTDQEGNQREINSNDVAQLIKAD"
     gene            complement(63739..65232)
                     /gene="ansP"
                     /locus_tag="MOX77_000578"
     CDS             complement(63739..65232)
                     /gene="ansP"
                     /locus_tag="MOX77_000578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-asparagine permease"
                     /protein_id="HCA3356225.1"
                     /translation="MKTQTTHAAEQHAAKRRWLNAHEEGYHKAMGNRQVQMIAIGGAI
                     GTGLFLGAGARLQMAGPALALVYLICGIFSFFILRALGELVLHRPSSGSFVSYAREFL
                     GEKAAYVAGWMYFINWAMTGIVDITAVALYMHYWGAFGDVPQWVFALGALTIVGTMNM
                     IGVKWFAEMEFWFALIKVLAIVIFLVVGTIFLGTGQPLEGNATGFHLITDNGGFFPHG
                     LLPALVLIQGVVFAFASIELVGTAAGECKDPQTMVPKAINSVIWRIGLFYVGSVVLLV
                     LLLPWNAYQAGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMS
                     MGGSAPKFMAKMSRQHVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIAS
                     WAFIMVCQMRLRQAIKEGKAADVSFKLPGAPFTSWLTLLFLLSVLVLMAFDYPNGTYT
                     IASLPLIAILLVAGWFGVRRRVAEIHRTAPVTADSTESVVLKEEAAT"
     gene            65745..66377
                     /locus_tag="MOX77_000579"
     CDS             65745..66377
                     /locus_tag="MOX77_000579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="effector protein steA"
                     /protein_id="HCA3356226.1"
                     /translation="MPYTSVSTYARALSGNKLPHVAAGDYENKLSTKIMKGILYVLTA
                     GLAYGFTRVIEHYCNVTPKVDEFCANAGNIHNHLADAVRDEQFIIDVELSDGRMLTFE
                     QLSLMAGREPIVRISDGEHSVEVKGSFEDICMRLEEGFFEAPAYYGYDIDEKYKTVRE
                     RIAAYNALPQALGAIPSLKYYTDRANDMPEAKAQRAADIKDRYHNYLDKY"
     gene            66660..67505
                     /gene="nhoA"
                     /locus_tag="MOX77_000580"
     CDS             66660..67505
                     /gene="nhoA"
                     /locus_tag="MOX77_000580"
                     /EC_number="2.3.1.118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-hydroxyarylamine O-acetyltransferase"
                     /protein_id="HCA3356227.1"
                     /translation="MTSFLHAYFTRLNCQPLGGPTVEALRTLHLAHNCAIPFENLDVL
                     LPREIQLDETALEEKLLYARRGGYCFELNGLFERALRDIGFNVRSLLGRVILSHPASL
                     PPRTHRLLLVDVEDEQWIADVGFGGQTLTAPLRLQAEIAQQTPHGEYRLIQEGSTWIL
                     QFRHHEHWQSMYCFDLGVQQQSDHVMGNFWSAHWPQSHFRHHLLMCRHLPDGGKLTLT
                     NFHFTRYHQGHAVEQVNIPDVPSLYQLLQQQFGLGVNDVKHGFTEAELAAVMAAFDTH
                     PEAGK"
     gene            complement(67541..68434)
                     /locus_tag="MOX77_000581"
     CDS             complement(67541..68434)
                     /locus_tag="MOX77_000581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhzF family isomerase"
                     /protein_id="HCA3356228.1"
                     /translation="MKPQIYHVDAFTSEPFRGNSAGVVLHADTLSDAQMQLIARELRH
                     SETAFLLKSEESDVRIRYFTPTVEVPICGHATVAAHYVRATVLGLGNTTVWQTSLAGR
                     HRVEIHAEHNDYRITLEQGQPSFEPPLVGEIRAAIITALNLTEDDIVPGAPIQVASTG
                     HAKVMILLKPDVDIDALSPNLAALTAISQQIGCNGFFPFQIRPGKNETDGRMFSPAIG
                     IVEDPVTGNANGPMGAWLVHHGLMAHDGKTLQIQGHQGRALGKEGTVDVTVTIRDNQP
                     ENVTISGQAVILFHAEWAITF"
     gene            complement(68530..69168)
                     /gene="narJ"
                     /locus_tag="MOX77_000582"
     CDS             complement(68530..69168)
                     /gene="narJ"
                     /locus_tag="MOX77_000582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001767506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase molybdenum cofactor assembly
                     chaperone"
                     /protein_id="HCA3356229.1"
                     /translation="MQILKAIGLLMEYPDDELWECRDEALALIQHDAPMLANFTRELL
                     YAPLLDKQAEWCEVFDRGRATSLLLFEHVHAESRDRGQAMVDLLSQYETVGLHLNCRE
                     LPDHLPLYLEYLSVLPEAEAREGLQNIAPILALLGGRLKQRGAPWYQLFDALLTLAGS
                     TLTSDSVTKQIVQESRDFSCSSRSPVWFMSGARRSSISPVATRLFVPAANSL"
     gene            complement(69168..70712)
                     /gene="narH"
                     /locus_tag="MOX77_000583"
     CDS             complement(69168..70712)
                     /gene="narH"
                     /locus_tag="MOX77_000583"
                     /EC_number="1.7.99.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase subunit beta"
                     /protein_id="HCA3356230.1"
                     /translation="MKIRSQVGMVLNLDKCIGCHTCSVTCKNVWTGREGMEYAWFNNV
                     ETKPGIGYPKNWEDQQEWQGGWVRDVNGKIRPRLGGKMGVISKIFANPVIPQIDDYYE
                     PFTFDYQHLHTAPESKHQPTARPRSLIDGKRMDKVIWGPNWEELLGGEFEKRARDRNF
                     DNIQKEMYGQFENTFMMYLPRLCEHCLNPSCVATCPSGAIYKREEDGIVLIDQDKCRG
                     WRLCISGCPYKKIYFNWKSGKSEKCIFCYPRIESGQPTVCSETCVGRIRYLGVLLYDA
                     DRIEEAASTEHETDLYERQCDVFLNPHDPAVIEEALKQGIPQNVIDAAQRSPVYKMAM
                     DWKLALPLHPEYRTLPMVWYVPPLSPIQSYADAGGLPHNGNILPAVETLRIPVQYLAN
                     MLSAGDTGPVIRALKRMMAMRHYMRSQTVEGVTDTRAIDEVGLSVQQVEEMYRYLAIA
                     NYEDRFVIPTSHREMARDAFPERNGCGFTFGDGCHGSDTKFNLFNSSRIDAINITEVR
                     DKAEGE"
     gene            complement(70709..>72631)
                     /locus_tag="MOX77_000584"
     CDS             complement(70709..>72631)
                     /locus_tag="MOX77_000584"
                     /EC_number="1.7.99.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase subunit alpha"
                     /protein_id="HCA3356231.1"
                     /translation="STSFFYNHASQWRYEKLTAQELLSPLADPTKFTGHLIDFNVRAE
                     RMGWLPSAPQLNLNPLSVKASADKAGLSAADYTMQVLKSGAIRFACERPDSGHNHPRN
                     LFVWRSNLLGSSGKGHEYMLKYLLGTDSGIQGEALGSSEGIKPEEVEWQSAAIEGKLD
                     LLVTLDFRMSSTCLFSDIVLPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWESKSDWE
                     IYKGIASAFSEVCVGHLGQETDVVLHPLQHDSPAELAQPFDILDWRKGECELIPGKTA
                     PNIVVVERDYPATYERFTSLGPLLDKLGNGGKGIAWNTQDEVDFLGKLNYTKHDGPAK
                     GRPRIDTALDASEVILALAPETNGQVAVKAWQALGEMTGREHTHLAINKEDEKIRFRD
                     IQAQPRKIISSPTWSGLESEHVSYNAGYTNVHELIPWRTLSGRQQLYQDHAWMRAFGE
                     SLVAYRPPIDTRSVSEMREIPPNGFPEKALNFLTPHQKWGIHSTYSENLLMLTLSRGG
                     PIVWISEADARELGIEDNDWIEAFNANGALTARAVVSQRVPPGMTMMYHAQERIMNIP
                     GSEVTGMRGGIHNSVTRVCPKPTHMIGGYAQLAYGFNYYGTVGSNRDEFIMIRKMKNI
                     NWLDDEGRDQVQEAKK"
BASE COUNT        17921 a        18019 c        19043 g        17648 t
ORIGIN      
        1 tgtgtggatt aaccgcctgc aacggcactt ccgccagcga ttcctgcgcc agagccaatg
       61 cctgccagtt acgctcaacc agatcctgac ctttgctgct atagcttttg gcaatcgcgc
      121 cctgcagctc aaccagagcg ctatcgcccg gaagaatatg cgtcaggtgg aagaacgcca
      181 tttgcatgac ggtattgatg cgggcgccca gtccacattc gcgggcgatt ttcgccgcgt
      241 tgaccacgta aaaacgcgcc tttttctgat tcaataccgc ctgaacttct tgcggcagac
      301 gcgaccagac ctcgtcggcg ctgtacggcg tattaagcag aaagataccg cctggcttca
      361 gacgctccgc catctgatat ttatcgataa actgtaattg atggcagccg acaaaatccg
      421 cctgagcaat taagtaagcg gaacgaatgg gtttttcgct gacgcgcagg tgcgataccg
      481 tgagtccgcc agctttttta gagtcataaa cgaaataacc ttgcgcatac cacggcgtag
      541 aattaccgat aattttaata ttatttttcg tggcggatac gctgccgtcg cttcccagac
      601 cgtaaaataa cgcttccagt ttagcgctgc cgggcagggt attttccggt aatggcagcg
      661 agagattagt gacgtcatca taaatgccca ccgtaaaccg tggcttgggt ttcgcgcggc
      721 tgagttcatt aaagaccgcc agtacgcacg ccgggccgaa ctctttggat gatagcccat
      781 aacggccgcc aatggtgcgc ggcaatgttt cgcgctcgcc attattaaag gcttccgcca
      841 gtgcggtcat cacgtccaga taaagcggct cggcctgggc gccaggctct ttggtgcgat
      901 ccagcacggc gatagcgcga acggtttccg gtaatgcttg taacaaatgt ttggcggaga
      961 aggggcggaa cagacggact ttcagaacgc cgaccttttc tccgcgtatc agtagctcgt
     1021 ccacgacctc ttcgcaggtg ccgagggcgg agcccatcat aatgatgacc cgttcagcct
     1081 ggggatgacc ataatattca aatggctggt actggcggcc tgtagcatcg ccaaatgcct
     1141 tcatcgcctc ttcaacatga tcataaacgg cgttgtacca cgggttggtc gcttcgcgag
     1201 actggaagta ggtatccgga ttcgcagaag ttccacgaat caccggatgc tccggattca
     1261 gcgcgcgggc gcggtgagcg tcgatctccg cctgcggcat caggttcaga atggtttcat
     1321 ccgttagcgg tataattttg ttgatttcat gcgatgtacg gaagccatca aaaaaatgaa
     1381 taaacggaac gcggcttttc agcgtagccc tgtgcgcgat cagcgcaaaa tcctgcgctt
     1441 cctgaacgct ggcggcgcat aacatcgcgc agcctgtctg gcggaccgcc atcacatcgg
     1501 aatggtcgcc aaaaatagaa agcgcgtgtg tggcgacggt gcgtgcggca acgtgcagta
     1561 caaacggcgt gagctgcccc gccagtttat acagcgttgg gatcatcagc agcagcccct
     1621 gcgatgatgt aaatgacgta gaaagcgaac cggtttgtaa cgcaccgtga acggcggcga
     1681 tcgcaccgcc ttccgactgc atctctacca cacgcggcgt atcgccccag acatttttaa
     1741 gcccattgcc ggcccaggca tccgcttgtt cagccattgt tgaactgggc gtaatcgggt
     1801 aaatggcgat aacctcgctg gtacggaacg ccaccgacgc tactgcgcca ttaccgtcaa
     1861 tcgtttgcat atgacaccct tacattgcgc aaaaaagagg gacacgcata atcgtgagcg
     1921 tatcctgtag ttatcctttt attttagcaa agcccttcaa gccccatttt cgcttttgtg
     1981 tccctggcgg gaggagaatg gcgatttctt gccgaaaaga cgtaaaaaat tgccaataaa
     2041 tgttaatgaa gcgcataaat gcgcgctttg cctctcgacg cgtcagtttc tgctgcctat
     2101 tatttagggc ggtgtcgttt ggatgaataa acagagggga gagaaatgcg cgcagcgttt
     2161 tgggtgggat gtgccgcgtt attattgtcg gcttgcagta gcgaacctgt tcagcaggca
     2221 actgcggcgc atgtttcgcc agggatgaaa gcggcgatgt ccagcgccgg cgaagcgaat
     2281 tgcgctatga ttggcggttc gctttcagcg gcccggcagc ttgatggttc agtaattggt
     2341 atgtgcgcgc tacccaacgg caaacgttgt agcgaacagt cgcttgccgc cggaagctgc
     2401 gggagttatt aagcgcggcg tttcgcctga cgcgtataac ttttcactta atggcttagt
     2461 gcgctaaatc cgccagttta tacattagcg ttgtttctgc cgtcgccagc gttaattggt
     2521 tcgcagttaa atcgacttgc gctcctttgc tgaagagctc gctgagggtg ccgtccagcg
     2581 cattaagctg cggatcggcg cacatcattc gggtcatcgc taaatttttc acttttaatt
     2641 cgccgtccga tagttttcct tcgccggtga attgattgca cattttgccg gataccgtca
     2701 tgtcctcgcc aaagctgagc tccgggccgg tgaccgtttt accgtttacg ctttccagaa
     2761 caaagcggtg gtgctccagt tgctcgcgtt tgacggacac ttttccactg ctcacacacc
     2821 ctgtcattat gatgctcagg gcgaccagcg tgacgatttt cttcattgat attctctgta
     2881 atctgatagt taacactgac tatagtaatg atatgaccgg atagatcttc aggggttatc
     2941 cgaaaatgct cctctgagcg caggggagcg acaggattag aacagcgcgt tcgggcaggc
     3001 ttcgcccttc tcaagctggc ttaagttttg taacgtggtt tcagagatgc tgatcagcgc
     3061 ttctgcggtc aggaatgcct gatgccccgt aaacagtacg ttatggcagg ccgacagacg
     3121 gcggaaaaca tcatcctgaa taacatcgtt tgacttgtcc tcaaagaaca ggtcgcgttc
     3181 gttttcatac acatccatcc ccagcgagcc gattttctga ttcttcagag cttcgatagc
     3241 cgcctgggaa tcaatcagcg cgccacgact ggtattaatg atcataacgc catttttcat
     3301 ttgatcgaat gccgcatggt tcagtaaatg gtagttttcc ggcgtgagcg ggcagtgcag
     3361 ggaaatgaca tccgattcgg caaacaacgt ttgcagatcc acatactcga cgccgaggtc
     3421 aagcgcggca gtgctgggat agggatcaaa cgccagtaaa cgcattccaa agcctttcag
     3481 gatacgcagc gcggcgacgc cgattttacc ggtaccaatg acgccagcgg tttttccgtg
     3541 catggtaaag ccggtcagtc cctcaaggga aaagttagcg tcgcgggtgc gttgataagc
     3601 gcggtgaata cggcggttca atgtcatcat catgccaatc gcatgttcag cgacggcttc
     3661 cggagaataa gccggtacgc gcaccacctg caagccgagt tctttagcgg catccaggtc
     3721 gacattatta aatccggcgc aacgcagcgc gatgtatttc acgccgtgtt ttttcagctc
     3781 ttccagtacc ggtcggctcc cgtcgtcatt cacgaagata caaactgctt cacatccatt
     3841 ggcggttttc gccgttttct cggttagcag aaaatcaaaa aactccagtt caaaaccgaa
     3901 cgcttcgttc acttgctgta gatatttctt gtcatactgt ttggtactat agacggcgag
     3961 tttcatatga ccttctccag tgatgttaga atcacacaaa tatgcttaaa attatcttac
     4021 aaaaaatcaa aaataattga tagtcataca tatgatgaat aattttaggt tatcattctc
     4081 cacgacgcct caaatagtcg gagggcggcc ctgcaacacg cataacgtat cacccgtttg
     4141 caacatgaac tattaggcta tgtacgggca atcatgccaa aataaagaga tagccgactg
     4201 aatttttcgt taaatcagga aattaatggc ccatgaaggg taaatataaa gccgcccttg
     4261 cgctactgtt actgctgatt cttgtccctc tgacgctact gatgaccctc gggctgtggg
     4321 ttcccactct ggcgggaatt tggctacccg tcggtacccg tatcgctctg gaacaaagtc
     4381 cacgcctgac acgtcatggg ttagtgattc ccgatcttcg ctatctggtc aatgattgtt
     4441 cgttagcgca tattacccag gcggaactga cgcatcccag ccgttggttg ctgaatatta
     4501 aaagcctcaa actggatgcc gcatgcctgg cgaaactgcc ggcttcggaa gcttctcccg
     4561 ccgcgccgcg tacgctggcg cagtggcagt caatgctgcc caatacctgg attaacatcg
     4621 ataatgtcat tctcgcgccc tggccggaat ggcagggcaa gctggcgatc tccatgacgc
     4681 cggtcattca gcagatacgt tatcagggcg aaaaagtaaa atttcaaggg cagctacgcg
     4741 gtcaggcatt gacggtgagc caactggaga tcgccgcgct ggccaaccag cctcccgtta
     4801 gcctggcggg ggagtttatg ttgccgctgg taccggatgg cctgccggtc agcggtcatg
     4861 cggcagcgac cttgcgtctg ccgcaggaac cgtcgctggt ggatgcggaa ctggagtggc
     4921 gtgataatgc cggacagctc atcgtgatgg cgcgaggtaa tcctgatccg attctcgatc
     4981 tcccctgggc ggtaacgcgt cagcggctta ccgtcagcga tggccgctgg aactggccat
     5041 atcagggatt ccccttgagc ggacgtctgg cttttaatat cgataactgg caagccgggc
     5101 cggataatgc gcgagtcagc ggacgcctga atattctgac ccagggcgat gccggtaaag
     5161 cgaacgcggt actgactatc ggcccgggaa aactcagcat ggatagcagt gagatgcctc
     5221 tacagcttac cggcgaggct aaacagaagg atttaatctt ttatgccgta ttgcccgcta
     5281 tgttccgcgg cagtctggcc gatccgcagc tcacctttgc acctggcgca ttgctacgct
     5341 cacgcggacg ggtgattgat gcgttagata ttgatgaaat tcgttggccg ctggcgggcg
     5401 ttaaggtaac gccgcgcggc gttgatggtc gattacaggc tattttacgg gcgcacgaaa
     5461 atgagatggg cgatttcgtt cttcatcttg atggcctggc caatgatttt ctccctgatg
     5521 ctggtcgctg gcggtggcgc tattgggggc aaggaagctt tacgccaatg cgcgcccgct
     5581 gggatattgc cggacagggc gaatggcatg ataacaccat caggttgacc agtttgtcca
     5641 ccggttttga tcagttgcac tatggcgcaa tgaccgtcac atcgccaaga ctggcgctgg
     5701 ataaacctat tgtctgggtt cgcgacgcca caacgccgtc gctacagggc gcgctgtctc
     5761 tggaggcggg aaaaaccgta tttaccagcg ggagcgtgct gccgccttct acccttaatt
     5821 ttagcgttga agggcgcgag ccaaccctgt tccagtttaa aggcgacctt cgggcggggg
     5881 cgatagggcc ggtacggctg aacgggcgct gggatggcga acgccttcgc ggacaggcct
     5941 ggtggccgaa gcagtcgctt atcgttttcc agccgttgct tccaccggac tggaaaatga
     6001 cgctgcgcga aggctcactg tatgcgcagg tggctttttc cgctgcgcag gggcagggat
     6061 ttgaagcagg tggacacggc gtgttaaagg gcggtagcgc ctggatgccg gataacaaaa
     6121 tcaacggcgt cgatttcatt ctgccatttc gcttccacaa cggcgcgtgg caattgggga
     6181 cgcgcgggcc cgtctcgctg cgtattgccg ggatagtcaa ccaggtcacg gcgaaaaata
     6241 tcaccgccga tttacagggc ggttatccct ggagcgagtc gaatccatta ctgctaagcg
     6301 atgtcagcgt agacgtgctg ggcggtcaaa ttattatgaa acagttgcga atgccgcagc
     6361 acgacccggc gcttttgcgg gtgcaaaata tttcatccag cgaattgatt agcgccataa
     6421 atccaaagca attcgccatg tctggtccgg ttagcggcgc gctgccgctg tggctgaaca
     6481 atgaaaaatg gataatcaaa gatggctggc ttacgaatcc tgggccaatg acgttgcgta
     6541 tcgataaaga tactgcggat gcggtggtga aggataatgt cacggcaggc tcggcgatta
     6601 actggctacg ttatatggag attacgcatt cgtggacaaa aattaacgtt gataacctgg
     6661 gcgtactaac gatgcaggcg gccattaccg gcaaaagccg ggtagatggt aaaaccgcga
     6721 tcgttaactt gaactatacc catgaagaaa atgtgtttac gctgtggcgc agtttgcgtt
     6781 ttggcgacaa tttacaggca tggcttgaac aaaatacagc gttgccgcaa cctccttgcc
     6841 ggaaagacaa ggactgtgag gataaataat gaaaatgagt attgccatgc tgtcagcgct
     6901 tgcgtcattt atcgtggtgg ggtgcacgcc acgtattgaa gtcgccgcgc cggaacagcc
     6961 gattaccatc aacatgaatg taaagatcga gcatgaaata catatcaaag tcgataaaga
     7021 cgttgaagaa ctcctgaaat cacgcagcga tctattctga ggccataatg aaaaagtatt
     7081 taatactatg ggtgctgacg ctgagcttgc tcacaccttc tgtgtgggcc ttaaccctgg
     7141 acgaagcgcg cacgcagggc cgggtcgggg aaacgctgaa tggctatctg gtggccttaa
     7201 agaatgatgc cgaaacccag aagctggtgc ttgatatcaa tcatgcccgt cgcgccagtt
     7261 atcagcagtt agcggatagc aatcatcttc ccgtggatga ggtggcgaag atggcagggc
     7321 aaaaactggt taagcgcgcc aggccgggag aatatgtcca gggaattaat ggcaaatgga
     7381 tgcgtaaata accgcttccc gacaattttt ttaccgcaaa atgcattttt atatgggtaa
     7441 tttttgaata cggaggtcgt atttacatta ggcgaaccgg aaggctattt ctatactgtc
     7501 gactggtatc actattcgcg tgagtaacca ggtatgacgt ctgaaaaatt atctgctgcc
     7561 tgccattgtg gcagcgtcgt gtttaccgtt caacttagcg atggctttca taccgccagg
     7621 cgctgcaact gttcgttttg ccggatgcgc ggagcggtgg cagtgtctgc gccgctatcg
     7681 ggtattaaag tgctaaaagg gcaggataag cttaccgaat atcgcttcaa tacgggcaag
     7741 gcggtgcatt ttttctgttc ggtatgcggg atatatactt ttcatcagcg ccgatccaat
     7801 cccgatcaat atggggtcaa tgtggcgtgc attgaaaatg tgtcgccttt tgatttcgcc
     7861 tgcgttgaag tcaatgatgg ggtaacgcat cccagcgatg gcggcagtag cggcgtggta
     7921 ggatatttgc gctacgaacc taagaagtca cctcccgtcg aaacgggagg caaaaatatt
     7981 taagcggcca cgacgctgtc aatcgcggct tttgcatcgg cctgggcttt agctgccact
     8041 tccggcccgt aggcgatgcc ttcggcaaag acaaaattca cgtcggtgat accgataaaa
     8101 ccaaggaaca ctttcaggta aggcgcaatc aaatccgtcg gggtgtcttt atggataccg
     8161 ccgcggctgg agagaaccac cgcgcgtttg ccggttacca gaccttccgg gcctttttcg
     8221 gtatagcgga aagtgatacc ggcgcgggca atcagatcaa agtagttttt cagctgcgtc
     8281 gggatattga aattgtacat cggtgccgca ataacgatga cgtcgtgggc tttcagttca
     8341 gcaatgagtt catcagacag cgccagagcg tcctgctgac gtggcgttaa aggcgcatcg
     8401 cccggacgca tcgcgcccac cagctcgcca tccagcaccg gaacagggtt ggccgccaga
     8461 tcgcggacag taatttcatc tgcgacgtgt ttttcgcgcc attgttcaat aaaatagtca
     8521 gtcaactgac cagactgaga gtcccctgcc agaatactgg atttaagaac taataccttg
     8581 ctcatgggtg tttcctttta tgtgtttgaa ggggcgtgcc ccgttgcttg ttgacacttt
     8641 attcacaaat atgtcgcagg gatagcgcaa tatatcgaac cctttgttcg aaattattga
     8701 acaacacaaa aaaagcccca atgtggtact ctatacctat catttaaaac gattttaaac
     8761 aggcagaatg ctgcccaaga gctttatgac tgaacaatct acgttgacgc ttcaggtgtt
     8821 acagcagcgg ctggatgcac tgatgctgcg cgacaaacag cgcttttcgc gccgcctgca
     8881 tggcgtaaag aaagtaaaaa atcctgatgc gcaacaggcc attttccaga cgatggcgaa
     8941 agaaattgaa caggctgcga cgcaggtcgc tctccgcgaa gcggcgcgcc cctcaatcac
     9001 ttatccgcaa aatctgcctg ttagccagaa gaaacaggac attctggaag cggtccgcga
     9061 tcatcaggtg gtgatcgtgg caggggaaac cggttccggt aaaaccaccc agttgccgaa
     9121 aatttgtatg gaactgggac gcggaattaa aggacttatt ggacatactc aaccgcgtcg
     9181 tctggcggcg cgcaccgtcg ctaaccgcat tgccgaagag ttgcaaacgg agcctggcgg
     9241 ctgcatcggc tataaagttc gtttcagcga tcatgtcagt agcaacacca tggtcaaact
     9301 gatgacggac ggtatcctgc tggcggaaat ccagcaggac aggctattga tgcagtacga
     9361 caccatcatt attgatgaag cgcatgaacg cagcctgaat attgacttct tgctcggcta
     9421 tctgaaagag cttctgccgc gtcgccccga tctgaaagtg attattacct ctgcgaccat
     9481 cgacccggaa cgcttctcgc gccactttaa taacgcgccg attatcgaag tctctggccg
     9541 aacgtatccc gtagaagttc gttatcgccc catcgtggaa gaggctgacg acactgaacg
     9601 cgatcagcta caggcaattt tcgacgctgt tgatgaactg gggcgtgaaa gtcctggcga
     9661 tatcctgatt tttatgagcg gagagcggga aatccgcgat accgccgatg ccctgaacaa
     9721 gctgaactta cggcataccg aagtgttgcc gctgtatgca cgcttgtcga acagcgaaca
     9781 gaaccgcgtt ttccagtcgc acagcggacg ccgtatcgtg ctggcgacta acgtggcgga
     9841 aacctcgctg acggtgccgg gtatcaaata tgtgatcgat cctggcactg cgcgcatcag
     9901 ccgctacagc taccgcacta aagtgcagcg cctgccgatt gaaccgatct cacaggcttc
     9961 cgccaatcag cgtaaagggc gttgcggacg cgtatcggaa gggatctgca ttcgtctgta
    10021 ttcggaagat gactttttgt cacgcccgga atttaccgac ccggaaattc tacgtaccaa
    10081 cctggcgtcg gttattttgc agatgaccgc cctgggactg ggtgacatag ccgccttccc
    10141 gtttgtcgaa gcgccggata agcgcaatat tcaggatggc gtgcgtttgt tggaagagct
    10201 gggggcgatt accgccgacg aacagcaaac ggcatataag ctgacgccgc tgggccgaca
    10261 attatcccag ttgccggtcg acccgcgcct ggcgcgtatg gttctggaag cgcaaaaaca
    10321 tggctgtgtg cgcgaagcga tgatcattac ttccgcactc tctattcagg atccgcgcga
    10381 gcgcccagtg gataagcagc aggcttccga tgagaaacac cggcgtttcc atgataagga
    10441 atccgatttt ctggcgtttg ttaacctgtg gaattacctc ggcgagcaac aaaaggccct
    10501 gtcgtcgaat caattccgcc gtctgtgtcg caccgactat ctgaactatt tacgcgtgcg
    10561 tgagtggcag gatatctata cccaactgcg tcaggtggta aaagaactgg ggattccggt
    10621 aaacagcgaa cccgcagaat accgggaaat tcacgttgcg ttgttaacgg ggctgttgtc
    10681 gcatatcggg atgaaagatg ccgataaaca agagtacacc ggcgcgcgta acgcccgatt
    10741 ctctattttc cccggatccg gtttattcaa aaaaccgccg aaatggacaa tggtcgccga
    10801 gctggtggaa accagccgtt tgtgggggcg catcgctgcc cgcattgagc cagaatgggt
    10861 ggaaccggta gcccagcacc tgattaaacg ttcatatagc gaaccgcact gggagcgggc
    10921 gcaaggcgcg gtgatggcga cggaaaaggt tactgtctac ggtctgccga ttgtcgccgc
    10981 gcgcaaggtg aattatagcc agattgaccc ggcgttgtgt cgcgagttgt ttatccgcca
    11041 tgcgctggtg gagggggact ggcaaacccg tcacgccttc ttccgtgaga atctaaaatt
    11101 gcgtgcggaa gtcgaggaac ttgagcacaa atctcgccgc cgcgatatcc tggtggatga
    11161 cgataccctg tttgagtttt atgaccagcg tattagccat gacgttattt ccgcccgcca
    11221 ctttgatagt tggtggaaaa aaatcagccg cgagacgccg gatctgctca actttgaaaa
    11281 aagtatgctg attaaagaag gcgcggaaaa aatcagcaaa ctggattacc cgaatttctg
    11341 gcaccagggc aatctcaagc tgcgtttgag ctatcagttt gaaccgggcg cggatgctga
    11401 cggcgtgacc gtccatattc cgttgccgct acttaaccag gttgacgaga gcggttttga
    11461 atggcagatc ccagggctgc gccgtgaatt agtgattgcg ctgattaaat cgttgccaaa
    11521 accggtacgt cgcaactttg ttccggcgcc aaactatgct gaagcgcttt taggtcgcgt
    11581 aacgccgctg gagctgccgc tgctggacgc tctggagcgt gaactgcgcc ggatgaccgg
    11641 cgtcacggtc gatcgggaag actggcattg ggatcaggtg cccgagcatc tgaaaatcac
    11701 gtttcgcgtg gtgaatgaca aaaacaagaa actgcaggaa gggcgttcgc tcgccgagct
    11761 taaaaatgcg ctgaaaggca aagtgcagga gacgctctcg gcggtagcgg atgacggcat
    11821 cgagcagagc gggctgcata tctggagttt cggcgagctg ccggaaagct acgaacagaa
    11881 acgcggtaat tataaagtga aggcgtggcc ggcgttagtg gatgagcgtg acagcgtcgc
    11941 tatcaaattg tttgataatc cgctggaaca acaacaggcg atgtggtgcg gtttacgccg
    12001 tctgctgttg ctcaatattc cttcaccgat taagtatctg catgagaaat tgccgaataa
    12061 agccaagctg gggctgtact ttaacccgta cggcaaagta ctggagttga ttgatgactg
    12121 tatcgcctgc ggggtagata agctgataga tgccaacggc gggccggtgt ggagcgaagc
    12181 aggtttcacc gcgctgcacg aaaaggtacg cgccgagctg aatgatactg tggtggatat
    12241 cgcgaagcag gttgagcgga tcctgacgac cgtattcaat atcaataagc gtctgaaagg
    12301 gcgggtggat atgagcatgg cgttggggct ttccgatatc aaggcgcaga tgagcggtct
    12361 ggtataccgt ggttttgtga ctggcaacgg ctttaaacgt ctcggcgata cgctgcgtta
    12421 tctgcaggca attgaaaagc ggctggagaa actggctgtc gatccgcacc gcgatcggga
    12481 gcaaatgctg aaagtcgaaa gcgtccagca ggcgtggcaa caatggataa ataaattgcc
    12541 tccagcgcgt cgcgaagatg atgatgttaa agagatccgt tggatgattg aagaactgcg
    12601 tgtcagttat ttcgcccaac agctcggtac gccttatcct atttccgata agcgtatttt
    12661 acaggccatg gatcagatta cggcctaaaa agccaggcga cgatatcttt caaagagatc
    12721 cggtacaagt tcggaacaaa aaggaggaat tatgaataca acgccatttc cggcgctctc
    12781 tgcggaaaca ttgctggcgg tgaataccgt cggacagtgg ctggcgcaaa atgatttttc
    12841 cggcgaacaa ccttattcgt cggattgcgt cgtcctggcg ggcaatgcgg tgatccccac
    12901 tatcgacgcg gcctgtcgca tcgccaaagc gcaaggcgtt cctttactga ttagcggcgg
    12961 tataggtcat tcgacgccgt ttttgtacgc cgtgattgcc cggcatccgc gctaccatac
    13021 tattcgcaca accggacgcg ctgaagccgc tatcctcgcg gatatcgcga accagttctg
    13081 gcatattccg gctgagaaaa tttggctgga agatcggtca actaattgcg gcgaaaatgc
    13141 ccgtttctcc tgcgcactga tccgtcaggc gaaagaaaac attaacacgg ctatcgttgt
    13201 gcaagacccc accatgcagc ggcgcactat cgcggcgttt cggcgcgtga caaacgacga
    13261 caccgatgcg ccgcgctggc tgagttttcc tggttttgtt ccggtactgc gccaccttaa
    13321 cggcggtaca cgttttgcca acgttgaaga gggcatctgg acggtggagc gttatctgtc
    13381 tctgattgcc ggcgagctgc cacgtttgcg tgacgatgaa acagggtatg gaccgcgtgg
    13441 taaagatttt atcattcacg ttgatatccc acgcgatatt gaaaaggcat ggcaggtatt
    13501 gcaggcagat acgacgctgc gcagtgcgtt agaacagaga gctttacgct aaaaatcgcc
    13561 cgtttgcgag ggtgaacggg caagtgcgac caccatttca taaatttgat gaattattta
    13621 taaaagctgg ttatgttgtc gctttacggt tttcattcag gacgcgctat gggcaataag
    13681 tattccggcc tgcaaattgg tattcactgg ttagtctttt ttctggttat tgtggcttac
    13741 gccgcgatgg agctacgcgg ttttgcgccg cgtagttatc ggccctagtt taatatgacg
    13801 catgtttcat gtggtatcac tattttgctt ttaatggtgg cgcgcttgat tattcggctg
    13861 aaatatccca cgccgcccat tgttcctcgt ccaaaaccga tgatgaccgg aatggcgcat
    13921 ttaggacatc tggtgattta cctgttattt atcgtgctgc ctgttattgg tctggtcatg
    13981 atgtataacc gcggcaatcc ctggttcgca tttggcatta ctatgccgca tgccgccgaa
    14041 gctaactttg aacgcgtaga tatgctgaaa tcctggcacg tcacgctggc gaatctgggc
    14101 tattttgtta ttggacttca tgccatcgct gctttgatgc atcactattt ctggaaagac
    14161 aatacgctgt tacggatgat gccgcgtaag cgtaactgac cgtcctgtat gacgtttgct
    14221 acaggcgggg ttaactgctt taggcaaaca aggcatctat cagaggggat ggcgtattcc
    14281 atacagaaaa cgcctgcgtc taaccaggac ccgtgacgca ggcgaaggag gacgggtcta
    14341 catcggaagc gggtattata cttatttgta tgacaaataa aataaacaat tactattccg
    14401 taatccaatg tttaatcaac gggttaaacc cacatgatcg cgctgccgac cgcccggaag
    14461 tgcctacacc tacaatgaac gtggcatagt ggcggaaaat agcgcaacgg cgccatgttg
    14521 ctccaaagtc accttagcga aatgttcgtc caacacgctg cgtaacgtat cggctgaatc
    14581 attggtatta ctgaatattc ctttcttgtt ataaacagcc attaatttct taccaaaagc
    14641 attgtgagga acctctttgc ccagaatcgt ggcgccaaaa agtgtgccgc cgggttttag
    14701 cgccataccg gcatttttaa ttgccttcgc ttttgttgtc atctcaccgg gtaagcagtg
    14761 cagaagatag tacatcgaaa cggaatcgaa gcgcccgtgc cagtccgccg ggaacgtgtc
    14821 gaaaacatcg tgttgtagtg tggcgcggat tttcgtatta cccactcggc tggcggctat
    14881 tttcaggcta tccggattta aatccatcag cgaaatggca tgagtcgcag gtgcatgttt
    14941 caggtaataa cctgtaccta cgccaatatc caggtgagtc tcgcccatgt gatgcaggaa
    15001 gaaaggaagt agtcgcgtat cagtaggaca cttccaggca tatttgtttg agatattgag
    15061 tacccaccag tcatataagc taagcgtgaa tgggttatag acttttgcgc ctgattgttg
    15121 tgtatgcttc attgttctct cattaaataa tttcgcgctg gaattaaaac aacgaagtaa
    15181 tcgttaggca agcattaatc aggtgagtga gtaatttaat gcgatgaata aaggcgatat
    15241 tattaattaa acggctatct taaagaatat agaggataat aatagctgat aaatgaattg
    15301 gacagtcata ttattataag ctgataatta ataatcgtta atataaatat attaagcctt
    15361 atgataatag caatgcaatt aaatgcatga ggaacaatat ttattcatac acataaagcg
    15421 attattgcac attaattgat attttaaatg ttacgctgag atagccatct ttatttaata
    15481 tcacctacct ggaggcgata tgattgaggt ttttgaagcg tttggctgga ccttactttt
    15541 aggcggtctg gcagtggcag tactgtttat cactgcactg gatagaaaac ggtaatcatt
    15601 gcatttgacg cgcctgttga gttggtatta caaataattg tacctgaaat ctaccacttc
    15661 tgaattttgc gatattttgc cattctgacg gcaaggggta atcctgactg aagttaccgc
    15721 cgcttaccaa ccagacacga tggtaacttt ttgaaagcgt tgtcagagta tcaatatatg
    15781 tctgatcggc ttgcgcataa aacagtgaac caaagccata ggcattcggt cttcctgatg
    15841 ttccgtgtgc gttaggtggt gtataaagaa acgtacgata atctcgctta ttataataca
    15901 cataacttaa ataatcgaac attttactga ctaccacggc atcattaggc tggtgacggg
    15961 tattaatata gtttaccagt ggtttaaact cgtctatgtg ctcagggtta ttatgatatg
    16021 aaccatagcc gaataataag gtgaataaga taaaccagaa gccacaaacc gctttttttg
    16081 cgcgggtaag taataccgcg agcaggggag gaatgctcag cgatgagaag aagaaataac
    16141 gatcgataaa taacggcatc caccaggaaa tgatgaagac cagcattaca gggatgacca
    16201 gattacaaaa taatatcagc tgatatcttt catattctcc gttgtataaa gatattcgcc
    16261 ccacagtacc gataaaacct cccacagcca gccacagaat gaacgacgga aaaccctgtc
    16321 cgttgtttcc ggtaaaaaaa tgccagtaca tcgcaggcag gtcacgccat gttacggggg
    16381 gaatccaacc gatatcatta ccggctctca actgcgccag atgagtcagt aaattaaaca
    16441 atacgggcaa ccaggggaga taagcgacag caatcgccag gttagcaaac caccagccag
    16501 gaagtttaag gtagcaggcc gttttatggc tttggcagga taatattgtt actgcgatcc
    16561 agtgggcaat aagtgtaaat agggtgaaat aatgggtgta aaagctgaac gtcataagta
    16621 aagcatacgc gacaagatag cgattatggg tgggtgtttt tatccacatc atcaatgcta
    16681 acgcggcagc gagcgttagc attcccatta acgcgtacat gcgcgtttct tgactgtaat
    16741 gaactgccat cggcatcagg gcggcgaacc atcccgccaa taaggctgta cgttcatttg
    16801 ccagccatcg cgtaagcgcg ataaccagca caactgtcag gatcccaaag agtagactga
    16861 gagagcgtac cgctgcaatg ctatcaccca ataatatgat ccagtcatgc agtaacagat
    16921 aataaagcgg gggatgcacg tcaaaagcgg catggaagag cagattatct acgctatgtc
    16981 gactaatcag cacgctggac gcttcgtcac accaaaggta gcggtcagtt aaaaacagca
    17041 accgtataag gacggagaat ataacaatga gacaaacatg atatttatac tttatttttc
    17101 ttaacccatc gccgggctgc catatggata gttgtggtag cgccataata tcctcaatgg
    17161 agtaagactt agaccagaat ggacacctaa cgcaataatg aaggttaaaa tcttaaccaa
    17221 cactaaataa aaataacttt gataatgtca gcggtgaatt aatcagaata gtgcagtaca
    17281 actcagtaat cctgaccgta atggcgaagc agtctatgct ctaaaaaccg ggtcaaaccg
    17341 acaataaagg taacgccaat aaggtacact atggcggcaa aaaggtaagc atggaagaat
    17401 ttaaagctgg ttgcagcaac ctcctgaatt cgcgcgaaaa actcagtata ttggataaga
    17461 aaaacgatgg tgctgtcttt aaggttatta atcacctgat tcgttaaggc tggaatggaa
    17521 gacagcaata cctgaggcag tataatccac aaaaagacct gccgtttgtt caacccctga
    17581 acgactgctg cctccgtttc atacttattc aatgcgttat aggccgttgt catgtacgcg
    17641 gcattatatg cgccgacatt caaggtaaaa cctgtaaccg ccacggtaaa agaggacagg
    17701 tgaatgccag attgaggtaa accataatag ataacaaaca gaataagaat gagtggcgta
    17761 ccgataaaga aatccatgta cagtcgagtt atggctttta ccacggggcg atggctcagg
    17821 ctcagaaaga aaataataat tccccacaaa aaaccggtga tggaaacaat cagcgcaagt
    17881 ttacaggttt ctttaatacc gtccacaaca agtggcagtt gttcagtcag gtcattaaag
    17941 aaaagagacc agccagcgat catcgttgtg cctcgctaaa aaaacagtgg atatctggat
    18001 ccgtttctcg taaggcaaga tcggtaaaag cgccttctgc acgaatcttg ccatgattaa
    18061 gaaacgttac gttatcgctt agtaatctgg cgaggcgaat atcatgagtg acgcataata
    18121 tagtgacgcc attgtcgtga agttgcttga tcaacattcc gacttcacga gtcatgagcg
    18181 gatcaagcgc agacgtcggc tcatcaaaaa taatgagttc tgggtcggtg accattgtac
    18241 gggccagggc gacgcgctgt tgctggccac ccgataattg cgaagggtat ttcgcgctat
    18301 gcgagaccat atcaagtttt tgtagctcat gtaaggcttt ctcccgggct agttgtcccg
    18361 gcatcccaaa cactttacat agggcaaggg taatattatc catgacgtta agatggcgat
    18421 acaatgcgta attctggaag acacaaccaa ctttttttct gaactcaaga atagtaaatt
    18481 ctttgtcgta aatattttcc ccgtgaaaat aaatatcgcc ataatcaggt tcttctaatc
    18541 gaagcagaca gcgtaaaagc gtcgtttttc cacaacccga tggccccatg actactttca
    18601 tgtctcccga ttgaattttc aaactaaccg catcaagaac cttttttcct gaatattcct
    18661 tacttatctc ttttagttcc agtaaagcca tgagtatcac ctctattttt atgtttcaac
    18721 tgatgcgata ttttttctca aacactccgg ccagaagagt aaatgcttta taaataatga
    18781 aatataatac cccggcaagg gtatagatct gtaacccgtt cagcgtgatg gctgtcagtg
    18841 acattgcctg cttcgttatt tcagcgatgc ctacagtata agcaaagggc gtcgctttta
    18901 atacagaaga aaactcattg ataataccgg gcacagaaaa tcgcaacatc tgtggcagtt
    18961 caatatttat tataacctgt aattgacgca ttcctgctac tttcgctacc gttatttcga
    19021 atggctcaac taatttaagc gcccctctga acacctcggc aagataactc ccgctgatta
    19081 agccgacgct gaggttcatg gccaccagag gtgaaacata tatgccaatc gatggcaatc
    19141 caaaataaac aagaaaaaca gcaataagta ttggaattcc ccgaagaata aagaccagta
    19201 cgtcgagtat cttctgtagt ggaagggggg atagtcgccg taatacggcg actgtaagcc
    19261 cggtcaaaaa cgctgagaga aaacaggtaa aggttacaag cagcgtatta ccaatccctt
    19321 ccaataggaa ataaaagata gccagcatat tacctgatga catagcttac tatttcatcc
    19381 agttatcaac gatgccagat attttttgtg gcccttgctc tttaagccat aagttaaaat
    19441 catcgcgcac gggagagcct ttcttaaagg caatgccaag ctgatcaaca ttcttgaaaa
    19501 cataacgact ttctatcggc atttttttct tatttttgaa ggtaaagtaa accggctctt
    19561 ctataaaagc cagatcaaga ttaccatttt ttagatcagt catcgtctcg ttataggttg
    19621 gatataattt tactttactt aacgagtagt atcctttggg ctccagatcg tttttgataa
    19681 ggtcggagta agccattcct cgagggtatc caatagaata ttgatttaat tcattgaggt
    19741 tattgagcgt tattttatga ttggccatac tgaccagata aaaagagttg atgtaataag
    19801 gttcagaaaa atcaataact ttcttacgtt tatctgtgat tgaaattccc gaaaatgcta
    19861 catcagcctg accactcgcc actgcgccaa gcattccatc ccaggcatat tcggtgatgt
    19921 ttagcttaca atgccgtgac tgacagtaag acgaaaaaag ctccagatct atcccctgca
    19981 atttgccatc agcactttta aataacatag ggggagaggc cggtgatact gcgacattga
    20041 gtgttctccc ttcaacgatg ctatcagcaa aagctgaaga cgacattatt cccaacacta
    20101 tcatcgataa gccaattttt ttggataaca tgctatctat ttcctgtggt aaggtaatac
    20161 gtattataaa ttaagcatta gagcgtgaac ctgacatttg caggcgtaaa gtacttaacg
    20221 ttatgtattc catcgctgtt aactaattta atcaggaggt ttgacaggaa tcatcaaagg
    20281 gaatggattg aatataccat gagatatcaa ctggatatga gtgcagcgac ccaatgaaag
    20341 gtgaaaatgt aaagatacca tagacattag tatactggac atagtttatg ctccatttac
    20401 gcatacatat ttacatgata agcagataaa tgcttcagtg acggtgtatt taatgtctct
    20461 aagtatcatc ttaccactct atccagggcc aatataaaga cttatctttg cttgtcaaat
    20521 acattttctg agctaaattg atttgcgtgc tatctatatt tgcaagcata taaattattt
    20581 atcctatgaa caaacgacaa caaatcagga gttctgacga tgttgttatg tttatcaaaa
    20641 cgttaacttg ttttaatcga taataatctt aattcagaaa tatcttaata tatgcggttg
    20701 tcgggataaa attctcaaat taacatcgta catcttatgt aataaacata aatacgataa
    20761 ataaatccaa aactgagact gccaaccgga taacaaacag caataaagag ggctctccat
    20821 taagttatcc tggcaatggt taaggtggta acatttttgg tggctttacc cattttaatc
    20881 gtgttcacaa cacgttaatt accttatgat taccatggta attaaaaatg aatcctcgat
    20941 gactcgatga ctcgttggct gaatgaaaag aaaattctgc atcacatagg cgcatgtatc
    21001 gcgtataatg ggctccgatg tccctaatca ttgctatgac ataataatat gtatcttaac
    21061 cgcttttgtt atttactcct gatctctgct gcggtcggaa gcatttttac atcgtatccc
    21121 gtcgcgatgt ggttcctgct cgccaatgtg ctaacgctgg cgatctacgg tgtagataaa
    21181 acggcggcac gtaaaacctg gcgcagagtg ccggaatcca ctttgttggt gtttggggtt
    21241 gtcggtgggt ggcctggtgc gattgttggt caacaacttt tccgtcataa aacgcaaaag
    21301 cagccattca aaacatactt tatcgccagt gtgatagtga gtattgtagt tacggtggcg
    21361 atctatcgac tctatccatt tttgtcctac tgaacataga gtatggatca cttattgacc
    21421 aaccggcagc aaagacaacc tcatattttc atgtcaccgg cactatgata ttgagcggtg
    21481 ttttgctcaa ggcgtaccgc agccgatgga acattattca gtggaataat gatgagctat
    21541 aaaactttct aacattgtgg caaaacaatg atggacttcc tgggttggat ggacaaagtc
    21601 attgaagacg tattgcggac atatatctag ctgagggtct ttagccccgg gaacttgcgt
    21661 cggatattcg ccatcatggg gatgtaccca gtaagttatt acgatctctc tcaggcgggc
    21721 gtgcctgtgc actccacggc atttcgtccc attgacgagg cttcgctctc gcgtaatccc
    21781 tttcgcatgt tcacttcgct attacgcctg gagctcattg aaaacgcggc attacgccag
    21841 cgggcggcgg aaatcttatc gcagcgtgat atttttacat cgcgctgccg acaattgctg
    21901 gatgagtacg acgagcaggg cggttttagt gctgctcagg ccgaagagtt cgtccgtgaa
    21961 acgctggaga cttttcgctg gcatcgtcag gctaccgttg atgaagaaac gtaccgcagc
    22021 ctgcatcgtg agcatcgttt aattgccgac gtggtctgtt ttccgggatg ccacattaac
    22081 catctgacgc cgcgtactct ggatatcgac cgggtacagg ccatgatgcc ggagtgcggc
    22141 attacgccta aaattcttat cgaaggtccg cctcgccgcg aagtgcctat tctgttgcgg
    22201 caaaccagtt tcaaagctct ggaagagcag gtgctcttcg ttgatgaaaa gcagggtacg
    22261 cacacggcgc gcttcggcga aattgagcaa cgtggcgtcg cgctgacgcc aaaaggtcgt
    22321 cgattatatg acgaactgtt gcacaaggcg ggaacgggta aggacaactt cacgcatcaa
    22381 ctccatttgc gggaggtctt taacgccttt ccggatagcg aatttctgct tcgcctgcag
    22441 gggcttgcct ggttccgtta tcgcttaacg ccttccggcg aggcgcatcg tcaggcgatc
    22501 catcctggcg acgatccgca gccgcttatt gagcgcggtt gggtgatcgc gcagccgatt
    22561 acctatgaag attttcttcc ggtcagcgca gccggcattt ttcagtcgaa tttgggaaat
    22621 gaaacgctgg ccagaagcca cggcaatgcc agccgcgacg cctttgaaca ggcgctggga
    22681 tgtgctgtac gggatgaatt ttcgttatat caggaagcgg aagaacgcag taaacgccgt
    22741 tgcggtctgc tttaaaagcg gtaagcttca caggctgtga ggatactgta aaaggaaggc
    22801 gttatgttga atccctccat cccgctggtg gcgacgcgtc acggtaaaat cgtgggcgtc
    22861 gtacaggaag aaatccatat ctggcgcggt ataccttatg ccgcgccgcc aacaggggag
    22921 ctacgctggc gtgcgccgca gcctgttacg ccctggcagg atgtgcgcca ggcggattgt
    22981 ttctcctgcg ccagttggca ggatattacc tggtgtcgcg aactcggcgg cggcgatccg
    23041 ggaaattttt ccgaagactg tctctatctg aacgtctggg ctcccgccgt gcgtcatgaa
    23101 ccgttgccgg tcatggtctg gctacacggc ggcggttaca ccattggcgc ggggagtttg
    23161 ccgccctatg acggtcaagc gctggcgaag cgcggcgcga tcgtggtgac ggtcaattat
    23221 cggcttggcc atctgggctt tttcgcgcat ccggcgctgg aaggcgaagg ggcggagtgt
    23281 attcataatt tcgctttact cgatcaaatc gctgcgctgc gttgggtgca ggacaatatt
    23341 gccgcatttg gcggcgatac gcagaatgtg acgttatttg gcgaatccgc cggcgcccgc
    23401 agcgtgctgt cgttgatggc ttcgccgttg gcgaaggggc tttttcataa agcgattatt
    23461 cagagtggtt atacgctgcc ggatacgccc cgcgaggtgg cgctaaaaaa aggcgttgcg
    23521 ctggcggaac atcttggttt agcccatgcc actgccgaac agctacgcgc tttaccggca
    23581 gagacgtttt ggccgctgga cgcgcctttt aaaattgcgc cgacgccgat ttccggcgac
    23641 gtcgtgctgc cgcatccgat gctggaaacc ttctttgcgg cgaaacagca tccaataccg
    23701 gtgatgatcg gctcgaatag cgatgaagcc agcgtattgg ccgtttttgg cgtcgatatt
    23761 gccggtcaaa ttcaaaaaat gcgccgtgag cggcgtgttg gcttggggtt aatccggctg
    23821 ctttatcctg gagtgaaagg cgacgaagcg ctagggcggc aggtctgtcg ggatatggta
    23881 tttaccacgt tgggttatgt cgtcatgcaa gcgcagaagc ggatcggcga accgtgctgg
    23941 cgttactggt ttgattatgt cgccgaggcg gagcataaca cctacgcgaa tagcgcctgt
    24001 catggcaatg aaataccgta tgtattcgat acgttaacgc gggctgagcc cacatgccat
    24061 tatgtgaatg agaatgacct ggcctttgcc tcgcaggtgg cggattactg ggtgaatttc
    24121 gctcgtcatg ccagccgcac gcgcgacgtg ctgcacggcc cggttcgctg gcccgccagc
    24181 attcgggggc gagatcgtct gttgcggatt gggctgaaca aacttgccgg ttttaaagtg
    24241 gaaaaccgct ttatgcgtgc gcgtctggcg ctgtttaaac gagtcatgaa acatcacgtt
    24301 agtctggaat aaacttttca taacctgaag aatgctgcgt gaggtttaca tccgattcgg
    24361 tcggttctta tcgacataaa atatttacgc ttttgcacag tttccaggcg accaacaatt
    24421 ggattattaa tgaattttgt ctagagtgag cggtcagaaa cgggcacatt cttgctgctg
    24481 aaaaaaccag cgcgggacca ttcacaagac cagaaggact cattttcagg tatgaatcgt
    24541 agacgattta ttaaaggttc aatggcaatg gccgccgtgt gcggttccag cggtattgct
    24601 tcactctttt ctcaggcggc gtttgccgcg gaatccgata ttgcggatgg taaaattgtc
    24661 cgttttgatt ttgctggtct gcaatcaatg gcccaggcgt tagcgaaaaa gccctggggt
    24721 ggcgcgccgg gacccttgcc ggatacgctc gccaatctga cgccgcaggc ctataacagc
    24781 attcagtatg acgcggcgca ttcactctgg aacggtgttg ccaaccggca gctcgatatt
    24841 cagtttttcc acgtagggat gggcttccgt cgtcgcgtac gcatgttttc cgttgatacg
    24901 acgacgcatc ttgctcgcga gattcatttt cgcccggaac tgtttaaata caacgatgcc
    24961 ggcgttgata cgacgcaact ggaagggcag agcgatctcg gtttcgccgg tttccgtgtc
    25021 tttaaagcgc cggaactggc gcggcgcgat gtcgtctcct tcctgggcgc cagttatttc
    25081 cgggcggtag atgatactta tcagtatggc ctgtcggctc gcgggctggc gatagatacc
    25141 tatactgacg gtcaggaaga gttccctgac ttcaccgcat tctggtttga caccgcgaag
    25201 ccgggcgata ctacgtttac cgtttacgct ctgctggaca gcgccagcgt gacgggcgcg
    25261 tataagtttg tgatccattg cgaaaaaacg caggtgatca tggatgtaga aaaccatctc
    25321 tacgcccgta aagatataaa gcaacttggc attgcgccga tgaccagtat gtttagctgt
    25381 gggaataatg aacgccgggt atgcgacacc attcatccgc aaattcacga ttccgatcgg
    25441 ctggcgatgt ggcggggtaa cggcgagtgg atttgccgcc cgctgaataa tcctcagaaa
    25501 ttacagttca acgcatatat ggacgataac ccaaaagggt tcggcctgct gcaactcgat
    25561 cgcgatttct cgcattatca ggatgtcatg ggctggtaca acaaacgtcc gagcctgtgg
    25621 gtggagccgc gcagtaagtg ggggaaaggc gcggttagcc tgatggagat cccaaccact
    25681 ggcgaaactc tggataatgt ggtctgtttc tggcagccgg aaaaagcgat caaagccggg
    25741 gatacgctgg cgtttaatta tcgtttgtac tggagcgcgc agccgccggt acaatcgccg
    25801 cttgcgcggg tcatggcgac ccgtacaggg atgggcggct ttcccgaagg ctgggcgccg
    25861 ggcgaacatt acccggataa atgggcacgc cgttttgcta ttgattttgt cggcggcgat
    25921 ctgaaagcgg ccgcgccaaa aggcattgag ccggtaatta cgctctccag cggtgaggcg
    25981 aagcaggttg agatcctcta cgtagagcct ttcgacggtt atcgtatcca gtttgactgg
    26041 tatccgacct cggattctac ggcaccggtg gatatgcgta tgttcctgcg ctgccagggg
    26101 gaggctatca gcgaaacctg gctgtatcag tatttcccgc ccgcgccgga taagcgccgt
    26161 tatgtcgacg atcgtatcat gcgttagtca gtttgccttc tgtaccgcca caaaggcggt
    26221 acaggttgcg gaaattgcca tgacataaac ccattcgtga gccgctgttt ttgtgacacg
    26281 gccttttcat cgttctattt ttgcaacagt ccttcctgtt tatccctctc gatcctgcgg
    26341 acaggggaca ttaagatagc ttcaccttat ttaagatata aagtgaatat aatgaaaaag
    26401 agttttcttg gtgctctcct gtctctgggt ttattaagtg ctgctcatgc agatgtatat
    26461 aaatttgata atacgcatac caatgcggta tttaatatcg atcgtttcca gacctcaacc
    26521 aatcatggcg ggttttatgc tattagcggc gaactgaaat atcagccgga aaagcaagtc
    26581 gcagagatgc gtgtgacgat tcccgtgagc gccttaaata ccggggtgga tgcgtttgat
    26641 aaccatattc gcagtagcga tattttggat gcggaaaaat atccagaaat agtatttaaa
    26701 tcgacaaaat ggcattttga agataataaa ccagtttcta ttgacggttt gttaacaatg
    26761 aagggagtaa ctaagcccgt caccttaacc accaccaagt ttggctgtta tatgagcccg
    26821 atattcaagg cgcaggtttg cggtggtgat tttgtcacgc aaatagatcg cacccagtgg
    26881 ggtgtagatt atctggtcga tatggggatg acgaaagttg tcgatataaa aatccaggca
    26941 gaagcggtta agcaataaaa ggaataatga tgaaaactca tcacctcatt cgggtagtgg
    27001 cctcgctggc aatgttggca acatcaggcc tggcttatgc tgaagagtac aaagccagca
    27061 cggacgaaaa agcaataaaa atgacgaacg tagcctctct ggaagcgcgc gttcaggcca
    27121 gaatggagaa aggggcattt ggttatattc gcggtggagc cgaagatgag aataaccttc
    27181 gcagcaacac cgaaagcttt gacaaaaaat atattatgcc gcgcgtatta cagggcattg
    27241 agttaaaaga gatcgattta tcaacgcagc tactgggtat tccgcttaaa acgcctataa
    27301 tccaggcacc gatggcggcg cagggcctgg cccacgcctc cggagagttg gcgacggcga
    27361 aaggcatggc gcaggtcggt tcgattttct cgttgagcac ttatggcaac aagaccatcg
    27421 aagaggtggc taacgtttcc gggaaaaacc cgttcttctt ccagctttat atgagtaaga
    27481 ataatcaatt taacgaattt attcttgcac aagcggtaaa acatggcgct aaagcgatta
    27541 ttctgaccgt agattcacct gtcggcggtt atcgggaaga agatattaaa aataacttcc
    27601 agttcccgct gagttttgca aacctggaaa tgttcgccag gaaaaatgac gatggttcaa
    27661 aaaccggcaa aggggcaggg ataagtgaaa tttacgcgca ggctaaacaa gcctttacgc
    27721 cggaggatat tgcctatgta catcgtattt ccggtctgcc ggttattgta aaaggcattc
    27781 agtcgccgga ggatgctgaa attgctatcc aggctggggc cgcaggaata tgggtttcta
    27841 atcatggtgg ccgtcaatta gacagcgggc cgtcctcatt cgatatgctt cctgcgattg
    27901 caaaagtcgt caacaagcga gtgcctgtta tttttgacag tggagtacgc cgtggttcgc
    27961 acgtattcaa ggcgttagcc agcggggcgg atattgtggc ggttggccga cctgtattat
    28021 acggtcttaa tcttggcggc gctcagggtg tggcatcagt gattgaacag ctaaacaaag
    28081 agctgacaat taacatgatg ttgggtggcg ccaggaatat tgaacaagtg aaaacgacac
    28141 gcttgttaac tgaaaaagat ctgccacagt aatacagtaa tatagaggtc gggtattata
    28201 cccgaccttt tcctgtgtga ttttcctcga caacgctttc ggtagaaaat gacgcgctct
    28261 gtttcctcaa atcctaacgc caggtgaact ttctgtgaaa ttgtattttc cggcgaggta
    28321 tcggaagcca tttcccgaca ccctttattc gttccccatc gttgcactgc tgctatcaat
    28381 tgtttcgcta agccgcgttg acggaacgag gggagaacaa aaataccttc aaggaaaacc
    28441 acgggcgaac tgtcacagcc attgacataa tcgtggcgga ttgaggcatc cgcaaagcca
    28501 atcgccaccc cgtctgccat cgcaataaat gatgccagat gttcggcttg cagaatttct
    28561 tcgccgtccg ccagatgggc gtcatccggg tgaccaggcc agagctgttt tcgcaatccg
    28621 cgccagtgct ccagatgggt tttgttcatt tgcctgatgt ccattaacgc gctcctgatg
    28681 aggggtctga catgatgaga cggcatcccg cctgctgata acgtcgggcg atagcagacg
    28741 ggagcgcact gtcgctaaga atggtagtaa tacaggacag cgtcgccacc gcatggggtt
    28801 ctacagtatc aaactttgaa tgatcggcca tcaatatgac ctcgcgtgag cgctgaataa
    28861 tgcgcgtttt gacgcctact tcaaacatgg tagcgttggt gatgcccgtt tcaatcgaca
    28921 gcgcatcgca agagataaag gcgcgttcaa cggcaaaggc gttaatcatc tccagcgcca
    28981 gactctcgcc caccgaaaag tagccggggc gaatcagtcc gccaataatg tagctctcta
    29041 cgtgtgggaa gccacccagt tcgttagcga ttttgatgtc attgcaaatg acttttactt
    29101 tggcgtcgac cagacatttt gccagttcca gacaggtgga gccagagtcg agaaaaaagc
    29161 agtctccatc cttgatgaac gtgcgggcga gggcggcaat ttcgcgtttc gcctcgcttt
    29221 gtaacgtccg cttaacgtcg aaaacatatt ctttatcttc cgtactgtcg tcaaagtcaa
    29281 tacaaccatg gccgcgaacc ataccgggat aacggctggc gatatagtga aaatcccggc
    29341 gcacggttgc ctctgcatag ccaaaaagct caatagcttg ttgtgttgag aggtgcctgt
    29401 gttgccaaag gtaatgcaac atctgtttga tacggtcggg gcgctgttgg ctcatcagca
    29461 tatgactcct ttatagcgcg gtgaattgtg acaatgtcac atcatagttc gccgtcgtga
    29521 acaacgcccg gccaatcacc agatgctggg cgcctgcggc ggcaagcagc cgtgcggcgc
    29581 gaagtgtaat accgccgtcc gcccagcatt ccgcagcagg gaaatgctct ctgctctggc
    29641 tcactttttc acacatcgcg gcaataaatt gttgcccgcg cccgtcgggt tcgctggtca
    29701 tgatcatcag cgcatccagt tgcaatgcca gataacgata aggcaatagc ggtgttgccg
    29761 ggttaagcgc cagtcctgct ttcgccccga tagcgcgaat atccgccaga atctccgagg
    29821 ggttttgcac gctttcggca tgaatgaaaa tccagccggg gcggatagct gcaagccagg
    29881 gtaaccagcg ttgcggtgat gaaaccatca ggtgaaatga gagcggatgg cgagagtatt
    29941 gcgcgaccgc ctgaatggtt ttcataccga aggtaatatt gttgatgaaa ctggtatctt
    30001 cgatatccag atgcagcgag ccgagaggcg catcgtgtaa agcggtcaac gcctcggcat
    30061 agcgcagcgg atcggcggag gccagtgaag ggtgcaggat catcggaacc ttcatcagcg
    30121 caatgcggtt aattgcgcga aaagcgcggc atcatttggc gcatcttgca acatcgcgac
    30181 gctttccggc gagtcgagcc actggctgat gcgttgaatg gtgcgaatat gtgcttcggc
    30241 atccgtggcg ctggcgcaaa gcaacagcca gatgggatcg caatccgcat tgccgaaagc
    30301 gaccggcgtt gatagcgtag tgacgctgat ttgattatgg ttggcgcctt gctctggtct
    30361 ggcatggggc agcgcaatcc ccggcgcgat aagataatat ggcccccatt taagggtgtt
    30421 ctcaataata ccgtccaggt agcagggggc cgccgcgccg aaggtaatca gcggacgaac
    30481 ggcgatatcc agcgcgtgtc gccagtcgct ggcatggcgt tgcgcctgaa cccacttaac
    30541 atcattaatc atcgatcgtt gactccttgc cggttcgggt tactctgaaa ccgatccccg
    30601 gcgtgtcttt tggcgaaggc gacggagatc ggcagaagag ttatcgctct ctgcagggga
    30661 taagcgtttt gcttatcccc attttattgt cggatatggc gtactttctc cataaacttc
    30721 gccacgcgcg cctggtcgac aaagttggcg aagacgccgt cttttttaaa cgtggttgcc
    30781 gttacgcatc cgtcggcaat gcagagctgc tcctcgacgt tttccagaca caccccggta
    30841 ttcgccagca cgaccgtgtc gggaacggta tcttttaccc gcttcagtat ggcgctatcc
    30901 gtgcgggcgc ccgccgtcag ccccgagacg cacagggcat cggggttatt gttaaatacg
    30961 gtcgatttcg caattgaaca gacatctcgg tttcccagat acaccgccgc ttccggcacg
    31021 atgttaaaca gcgttttcac gtggcctgcg ccgatgcgat gctgatggcg aatagtttcg
    31081 ccgacattcg tatcccagac gccaaaatcg ctggcgtaag caccggtgaa aatttcgcga
    31141 ataaattttg cgtcggtcgc catcgccaaa tcaaaagagg ccacagggtc ccacaacacg
    31201 tttaccccaa acggtacgcg aatttcactc attaactgac cgatgattcg tgccatcgcg
    31261 gcagtcgttt ccggtctgac tttcgttaaa taaggcagac taaattcgtt ggagaacatc
    31321 accgcatcca cgccgccatt ttgtagcgcc attaaatcgt catgggcgcg gtcaattacc
    31381 cagttcatgc ctttcctggt atcgaacccg ggatcgcccg gcagcgcccg taaatggcac
    31441 atggcgataa cggctttttc tgttcctatt acctctttta gccaactcat tctgggttgc
    31501 tccttattcc ggtagttcac gtttacgtaa gacaagtatg atgctggcga caatgccgac
    31561 cacaataacc acaccaatca tgcccagcga catcaattca gatattgacc agccaaacat
    31621 atttcccacc gacagcgcgg taatttgcgc gttttcagcg gcgaagctaa agccgccttt
    31681 gagcgccata tcggtaaagt acggcgcgaa ctgggtggcg atcagcaaaa cggtaatcat
    31741 gacaatgatg ccgctgagca gagtacgaat cagatcgccg cgatgaataa ctgtggccat
    31801 gcagataaaa aatggcgcga ccggtaaatc agccagcggc aggactttat tgcccggcag
    31861 tatgctcgcc agaattaaca tgatgggaat taacagcagt ccaaccgcga tggtggtcgg
    31921 gtggcctaac gtcactgcgg tatccagacc gataaagact tcgcgccctt taaagtgttt
    31981 ctggaagaac ttacgcgcgc cgtcggaaat gggcattaat ccctcaacga taaggcgaat
    32041 catgcgcgga aacagcacca taatcgccgc cacggtaatc attaaggttg cgcacccttt
    32101 aaagccttcg cctgcagcaa gtccgaagat cagcccgaga acaacgccaa tgatcaccgg
    32161 gtcgccgacc atcccatacc gtttttggat ctcctgagcg tcaatattgc gtcctttcat
    32221 aaacggtatt ttttcgtata tcgcatccag caatacgaac aacggcacgg agctggagcc
    32281 atacccttgc ggaatagaaa tcccttccag acccacaatg ttctgtaccc gtttcgtcgt
    32341 ccagtcggcc attttcaacg acaaggcggc atggcaaatc gcgcccagta cgccataaat
    32401 cagactgccg gtcatcaact ggacgaccgt tccggtaatg gcgtagtgcc agtagttata
    32461 aatatcaacg ttcatggttt tggtcagacg agtcaccagc ataccgacgt tgagcagaaa
    32521 gataacggga atgatcatcg cgccgatggc cgtcgcatag ccgacgccgg atgcgggccc
    32581 ggcgccgacg tcaaacacat gcagcgtcag gccaaaacgc tcaatcatca ctttaatcgg
    32641 cggactgaga ctgtcgatcg ccatgacgat caccagcccc atgccgacaa aaccgatgcc
    32701 gaccgtcacc cccgctttca ccgcctgcag ccagggaata cgaaagatta agccgatgat
    32761 aatcataatg atgggcacaa agacggtgcc gccgagagac aggatgtaat caaacataat
    32821 gcccccttta ttgtgttaac agcgccttga tttcttgttt taatgcgtcg tcgttgatgc
    32881 ctgtcagcag ggcggcgccg ttgagcgtcg ggatgccata gtcactgtgc gtacgcatgg
    32941 acgttacgat gagatccata ccgttacagt tcaacgggat ctcattcaga caacattgcg
    33001 ccgtggttgc cgcaatgcct tgctccgcaa gaaagtcctg cagtttttgt gcaatcatgg
    33061 ttgatgtcga catgccggta ccacatgcca caaggatctt tttcatcatg gtcgtgcctc
    33121 ttgtgtagcg cctgtttcag ggtcaatggg aaactgttct ggcgacatat tggccagcgc
    33181 agtcagtaaa cggatacaat cagccaggtc gcgcaggctg gcgacttcgg ctggcgagtg
    33241 ggtatagcgg cagggaatag aaagactggc gcagggaata ccgtccagtt caacctgaat
    33301 gtagcctgtt tcggtgatga cgcctggcgc gacttcacgc tgtacgggaa tattattttc
    33361 gtgcgcggtg gtctccagca tccgcagcaa acgcggcggc gtaatcagtc ccgccaacgt
    33421 accgcgtccg tgatagttca gacaggtgat gccgacgccg tggttgaccc gcacatccga
    33481 gtaatcctgc aggtcaggcg tgtcgcagga gggggtgata tcaataccaa tcgccaggtc
    33541 ggggcgcacg cgtcgtaaaa cgggaacaat cccgcgaata ttgaactctt cctgtaccga
    33601 cgcgaccagg aataccgcga tatcaagcgg tgtggaggcg agggcctcgg cgacgcccag
    33661 tagcgccgta caccccagcc tgtcatccag cgccttactg cacaccaggt cgttgcccag
    33721 acagtgcggc gggttgtaaa gggttactgg cgtccccacc tgaataccca ttcgttcggc
    33781 atccgcttta tcttttgcgc cgatatcaat ccagagttta tcgagcgcgg gtggctgggt
    33841 gcgctcgtca cccttcgcga agtgatatgc tttaataccg atacagccca tgatatcgcc
    33901 tgaacatccg gcaagcgtca caatcgaacc gggcatagta atttgcgccg ggccgcccac
    33961 gcgttcaaaa cgtaaaaaac cggagggttc gatcttgcgt accataaaac ccacttcatc
    34021 catatgcgca aaaatcatca ggcgaagcgc gtcggattta tcgctgccat aacgggcgac
    34081 gacattacct aagcgatccc gccagacgtc tttggcctgc tgttcgaacg cgtgctgcat
    34141 aacgtttgca atactgcttt catgtcctga aatcccgttt agccgcagta aagaaaaaag
    34201 cgtttcctgc acagaaaagg tcattggcgt ctccgtggtg ataaaacaat cagtcgttga
    34261 gcgttttata ggcggagaat ggttggataa gtgtgaaatg tgtcacgcgg aaatacgcta
    34321 aatatggtca ataaaaaata atgtgatggc gatacaataa aaacgctcat atcacctgcg
    34381 ggttatcggt aaaccaggct atttatgtga tcacgaccaa caacgaagaa gggcaacgcg
    34441 atggtggaaa ttattcctgt tagcacgacg ctggaactgc gagcggcaga tgaaagtcat
    34501 gttccggcgc tgcaccaact ggtactcaaa aacaaagcgt ggctacaaca gtcgctcgac
    34561 tggccgcaat atgtcacgtc gcaggaggaa acgcgtaagc atgtgcaggg taatatgctg
    34621 ttgcaccagc gtggttacgc caaaatgtac ctgattttct gccaggatga gatggcgggc
    34681 gtactctcat ttaatgccat cgagccgata aacaaagccg cctatatcgg ttactggctg
    34741 gatgagtccc ttcaggggca agggataatg tcgcaatcat tacaggcgct gatgacacat
    34801 tatgcccggc gcggcgatat tcggcgcttc gtcattaaat gccgcgttga taatcaggcc
    34861 agtaacgcgg tcgcacggcg caaccatttt acgctggaag gctgtatgaa acaggcggag
    34921 tatcttaacg gcgactatca cgacgttaat atgtatgccc gcattattga tgcggattaa
    34981 agagaaccga ctaagggggt acgcgtaata cgatcttctc cattgatcac ttttgggccg
    35041 cgtaggtgaa tagcattgcc gtcaaacgct atcaccgccg cccgtccgct aatctcgacc
    35101 tggcgctcaa tcagaatttc gccctgtata caggcatggc cttcaatcag cacgcggtcg
    35161 tccagtaaaa tcggacctcc gcgtacctca gcatgtccgc ctaccagcac atgatgtttt
    35221 aacacacagt tgccttcgat taacgcatgt tccgctacct gcgagctgta gcgaagggta
    35281 gggatagcat cttcctctgt gccggcgata acccgcgcat ggccatagac tttggcgcag
    35341 tcacagatcc agacattatt gtctttgttg ccttcgatga gcgcgaaatc aaagacctcc
    35401 gcccggtgct caataaaagc gtgagtgata gtggcgtcgc cataaagctg tacctgatgg
    35461 acaatccgcg aatggttcac ggtggcgcga tcgtaaattt gtaaaatctg cgcatgttca
    35521 tgcgttagtc cctgaacagc gagaatttct gactggttta acacgcgggc atcgccataa
    35581 atcgcacact ctccacgcac ggaagaggac tgaatggtga cgttgtcact tatccgtgcg
    35641 ccatcgctga tatcagcgcg atcaatccag acgttatcgc ctattcgcac gttattgtag
    35701 agcgtgcacg gctgcgtgat acgcgcgtta cccgtaattt ccgtgcccgc aaaggccatc
    35761 gcgttttcat cataaatcca gcaatccccc tgttgtgaca gcacattatc ggcatcaacc
    35821 cagccgccgg aggttccggc tttaacatcg ttaaaatccg ttacggcaat aacttgtcgt
    35881 aataagacgc ttttcttctc accgtctacc tgataagtaa aagcacgagg ttcttcactc
    35941 agtcgatatt tgatcatagg gaaattccgt gtgaacgatt aagataaccg tagcaaaggt
    36001 actggcgaaa caaccagaaa ttccataaaa tgcatttcaa atatacttta taaattaaac
    36061 aaaatgtgta atcacaagca gagcgatcgc gtgctcaatc tgcctgcggg ctattttggc
    36121 atcgtccttg gcactatcgg tatgggattc gcctggcgtt atgccagcca gatatgggca
    36181 ataagccact ggcccggcga catcatggtg atcctggcga tgattatttg ggcactcttg
    36241 accctggcgt tccttagccg tctggtgcgc tttccccata gcgtgatggc tgaagtgcga
    36301 catccggtaa tgagcagttt tgtcagcctg tttcccgcca ccacgatgct ggtcgcgatc
    36361 ggtttcgttc cctggtatcg cccgttggcc gttgcgctat tcagcgtggg ggtcgtcata
    36421 caactggcgt atgccgcctg gcagacggcg ggtctttggc gcggagcgca tccggaagaa
    36481 gcgacaaccc caggacttta tctgcccacg gtagcgaata attttatcag cgctatggcc
    36541 tgtggagcgc tcggttacaa tgatgccgga ctggtgtttt taggcgcagg cgtcttttcg
    36601 tggttaagtc tggaaccggt tattttgcag cgactgcgta gctgcggcga attaccggcg
    36661 gtgctgcgta tgtcgctggg tatccaactg gcgcccgcgc tggtcgcctg tagcgcctgg
    36721 ctgagcgtca atggcgggga gggcgacacg ctggcgaaaa tgctattcgg ctacggtctg
    36781 ttacagcttt tatttatgct gcgattaatg ccctggtatt tatcacaacc gtttaatgct
    36841 tccttctgga gtttttcgtt cggcgtttcc gcgctgacga ccacggggtt acatcttggt
    36901 cacggtagtg aatcagggtt tttccatatt ctggccgtcc cgctgtttat tttcactaac
    36961 gctattatcg ccttattgct ggttcgtaca tttctattgc tggtgcaggg gacgttgctt
    37021 attcgcactg agcgcgctgc actgttgaaa acggaggaaa aaaatgaccg ttcgtgacga
    37081 aaattacttt actgagaaat acggtttaac ccgcacgcat tcggatgtgc tggcggcggc
    37141 aaaggttgtc gcgccaggcc gaacgctgga tttgggatgt ggcaatggcc gtaatagtct
    37201 gtatctggcc gcgaacggtt atgacgttac cgcgtgggat aaaaatccgg ccagtatggc
    37261 taaccttgag cgtattaaag cggcagaagg gctggataat ctgcaaaccg accttgtcga
    37321 tctgaataca ttgacctttg acggcgaata cgattttatt ctctcgacag tggttatgat
    37381 gtttcttgag gcgcaaacca ttcccggttt aattgccaat atgcaacgct gcacaaaacc
    37441 cggcgggtat aatttgattg ttgcggcaat ggatacgccg ggctttccct gtacggtggg
    37501 attcccgttc gcttttaaag aaggcgaatt acgccgctat tacgaaggat gggacatgct
    37561 gaaatacaac gaagatgtcg gcgagcttca ccgcacggac gaaaacggca accgtatcaa
    37621 actgcgcttt gctacgatgc tggcgagaaa aacggcctga gcgatgcaag ttctgtaagt
    37681 cttgctgcgt tcggcatttt tttgtcgggc gccgcgttca aattgtgctg tcgttaccat
    37741 ttttagtgca tccagaatga tttcgttttg ctattatttc ctttgcatca ttgcgaagac
    37801 taaagggatc gtttcatgcg tactcatact ttatttaaag ttgcagtgct tactggcttg
    37861 ctggcgttat ccggctgtgc gtctaaagtc acacagccgg ataagtattc tggattctta
    37921 aaaaattatt cggacctgaa ggagactact tccgccacgg ggaaaccggt gttgcgctgg
    37981 gtagatccac attttaatga ctctaactat gacagtattg tttacaatcc gataacatat
    38041 taccccatcc ccaagccaac gacccaggtc ggacagcaag ttcttgataa actgctggct
    38101 tatacgaaca ctaaagtaaa atcagcaatt gaacagcgca aaccgctggt cacgacggca
    38161 gggccgcgca gtttgatttt ccgcgaggcg attacgggcg tggataccag caaagaaggg
    38221 ctgcaattct atgaggtgat ccctgtagcg ctgattgtgg cgggcacgca aatggcgacg
    38281 ggccaccgga ccatggatac ccacctctat tttgagggtg agctgataga tgccgcgacc
    38341 aacaagccgg tcgtcaaggt agtgcgctag ggcgaaggta aagacctgag taattccagt
    38401 acgccaatgg cgtttgagac gttgaaacag gttgtggatg atatggcgac ggatacctct
    38461 atgtttgaca ctaacaaaaa ataattctgc ggcgccatcg caagatggcg caaaccccgg
    38521 cagattagcg gccgccatca gccagacaac gacgggcggc gcgttctcgt taatattgcg
    38581 tagcctatcc cgccagcgat caacccccag aatgccgatc cgatgcccat cagcgttagc
    38641 ccgctggcgg tgacgagaaa tgcgataact gccgcgtcac gctcactttc gtgagtaagc
    38701 gcctgataca gactaccgct aatcgtactt aacagtgcca gaccagccag catttgcacc
    38761 cagctaaccg gtagggcgac catcagctcg gttatcgaac cgccaaacca cccggcaagt
    38821 aaataaaaaa cgcctgcggc ggcggccgct aaccagcgac gcgttggatc ggggtgcgcg
    38881 tccgggcttt gacaaatggc ggctgtaatg gcggcaatgc agatagaata aacgccaaac
    38941 ggcgaaagca gcagcgccag taatccggta aaaatcatta acggagagac aggaagctga
    39001 tagccagacg ccttcattgt ggcgacgccg ggggcgtttt gcgatgccat cgtcaccagg
    39061 aagagcggta ccgcgacgct caggctttga gcgaatgaaa agtggggggg aacgaaggtg
    39121 ggccacaccg gcgcgaaatg aataccgctc atcgccatct taccctggat gagcgccacc
    39181 gttattccca tcaccatggc agcaataacg gcatagcggg gcgcgaatac tttaaagagt
    39241 agccacgcca atagcatacc gccgcacatg acaaactctc cgttgagcgt cccgaacgcc
    39301 tgcaggccga agcgtagcag tattcccgcc agcattgcgg cggcaagaga atgggggatt
    39361 atccgcatca aacgcgcaaa caatcccgtg acgccgcaca gcacaatcag ggcattggcg
    39421 acaatgaata tgcccacggc gtctggcaac gataatccct gaagccctgt caccaacaga
    39481 gcggcgccag gcgttgacca ggcggttaaa accggcgcac gataccacaa ggttaacgtt
    39541 agtgtgctta tgcccatggc tataccgagg gcggtcatcc agccggcgat ctctgcgggt
    39601 gttgcgccag cggcaagcgc cgcctgccag ataatggcgg cggaacttgc atagccgacc
    39661 agaacggcga ccagaccaga taatacagta ggtaacggca gtgataacag acgcatgatc
    39721 gcctcttgtg cgttataacg gtcagtcaat gtagcattgt gcgttatagc gtacaagtga
    39781 tacgctatgg ccttacaggg gggaaaaatg gataacctga cacactatct ggcgaccacg
    39841 ttaagaacgt tacgccatca gcgaggctgg agtttatcac gtctggcgga gatctccggc
    39901 gtctcaaaag ccatgttggg gcagatagag cgtaatgaat ccagtccgac agtcgcaacg
    39961 ctgtggaaaa ttgcgacggg cctgaacgtt ccattctcaa tgtttatttc gccgccgcag
    40021 gccgaatttc ctccaacctt cgatccccag cagcaagcga tggtaatcac accgctgttt
    40081 ccgtgggacc ctgaactctg ttttgactat ttttccctat tgctggcgcc tggcgcggtc
    40141 agcgaatcaa cgccgcataa agccggcgtt atcgaacatg tggtggtgat tcagggtcgg
    40201 ctggacatgt gtactggtgg ggtatggcaa accatagacg ccggtaaagg tttgcgtttt
    40261 gccggcgata cggcgcatac ctatcgcaac agtagtgacc agacggttca ttttcactcg
    40321 ctgatccatt acccacgtga ttaagcggga aaactatttc gttagtttgc gcttctgact
    40381 acaatagccg ccatttcgct gctattggat aagaaagact gtatgcgcca gcaacctcac
    40441 tatctcgaat tgttaagccc ggcccgtgac gccgcaattg ctcgcgaagc gattttgcat
    40501 ggcgcagatg ccgtctacat cggcggaccc ggttttggcg cacgtcataa cgccagtaac
    40561 agtctgcgcg atatcgccga tctggtcccg tttgctcacc gttacggcgc caggattttt
    40621 gtcacgctga atactatcct gcatgatgat gagctggagc ccgcgcagcg gttaatcacc
    40681 gatttgtaca ataccggggt ggatgcgctg attgtgcagg atatgggcat tctggaactg
    40741 gatatcccgc cgattgagct tcacgccagt acacagtgtg atattcgcag cgtggaaaaa
    40801 gcgaagtttc ttgccgatgt cggtttttca cagattgtac tggcgcgcga gcttaatttg
    40861 agtcagatag cggctattca tcaggctact gacgccacga ttgagttctt cattcatggc
    40921 gcgctgtgtg tcgcttattc tggacagtgt tatatctctc atgcgcaaac cgggcgcagc
    40981 gccaatcggg gcgactgttc gcaggcctgt cgcttaccgt atacgttaaa agacgatcag
    41041 gggcgggtgg tctcttacga aaaacatttg ctatcgatga aagataacga tcaaacggct
    41101 aaccttggcg cgttgatcga tgcaggcgta cgttccttca agattgaagg gcgctacaaa
    41161 gacatgagct atgtcaaaaa catcaccgcg cattatcgtc agatgctgga cgcgattatc
    41221 gagcaacgtg gcgatctggc gcgtgcatcg gttggtcgga ccgagcactt ttttgttccc
    41281 tccacggaga aaaccttcca tcgcggcagc accgactatt ttgttaacgc gcgtaaaggc
    41341 gatattggcg catttgattc accaaaattt attggcttgc cggtaggcga ggtgctgaat
    41401 gtggcgaagg attatctcga cgtagaagcg acggagccgt tggcgaatgg cgatggtctg
    41461 aacgtgttga ttaagcgtga agtggtgggt tttcgcgcca atacggtgga gaaaaccggt
    41521 cataaccgct accgcgtttg gccaaatgat atgcctgccg acctgcataa agtccgtccg
    41581 catcatccgt tgaatcgtaa tctggaccat aactggcagc aagcgctgac aaaaacctcc
    41641 agtgagcgcc gtgtggcggt tgatatcatg ctgggcggct ggcaggaaca gcttattctg
    41701 acactgacca gtgaagacgg tgtctgcatc acgcatacgc ttgacggggt atttgaggaa
    41761 gccaacaact ctgaaaaagc gttgaataac ctaacagccg gactggcgaa gctgggacaa
    41821 acgctttact acgcgcgtga tatgcaggtg acattaccgg cggcgttgtt cgtgccaaat
    41881 agcctgctca atcagttccg tcgggaggcg attgatatgc ttgacgcggc gcggctggcc
    41941 cattatcaac gaggtcgtcg gaaacccgtg gcgcagcctg cgcccgtcta tccgcaaacg
    42001 catctcagct ttctcgctaa tgtctacaac cacaaagcgc gggaatttta tcaccgttac
    42061 ggcgtacaat tgattgatgc ggcctatgag gcgcatcagg agaagggcga ggtaccggtc
    42121 atgatcacca aacactgcct gcgttttgcg ttcaaccttt gtccaaagca ggcgaaagga
    42181 aatattaaga gctggaaagc cacgccgatg cagttggtgc atggtgatga ggtactgacg
    42241 ctaaaattcg actgccgccc ttgcgaaatg catgtcattg gcaaaattaa aaaccacatc
    42301 ttaaaaatgc cccagcccgg cagcgttgtc gcttcagtga gccctgaagc gctgatgaaa
    42361 acgctgctga agcgcagggg cgtttaatta acgaaaatag ctctctggtt tgcgcgattt
    42421 ctgccagttg tggtgctcgc gcaagccttc cgcggattct tccgctgccg cccgtaattc
    42481 atcgctgtcg gcttcgtgtc taagctggtg ccctcccgtc gcaaaccata cgaatgcgtg
    42541 gtcttgctgt ttcgccagta actggcctga aaatagcgca caggtcagta aaactactga
    42601 taacgttttt gtaagcatca tgccaccttc cagttacgtc gtgaggctat gatgccaata
    42661 atttctttga gttattattc aacacttcaa attagcgaaa acggtttgtc aataagtgcg
    42721 ataagttgta tgagaaaata tatttatact cagtatgtca attataaaaa taacgagcca
    42781 attcgttcca tagtaaatcc attattccct ggaagcatat ttttaaaggt attgtattag
    42841 atggttttgg tattgccagg ggattgtaaa tccatactat ttatggtgtg gtcaactctg
    42901 gtaatgagcc tcattttttg ttgtttcaac gagtgaagat aaatcttcag aaaaaaggct
    42961 gttatgaatt tgtagcgcta catattcagt aagctcgttt aaacatagca ggccatgaga
    43021 ggaactttct tccagcatat tcattagtat ctcattctta aacaaacatg aataaataat
    43081 ttgagtaact gagctttgtg cataatttgg ttcaaacgct gcattcttta agttagtatt
    43141 ctcaataacc tttgcggcta ttttgttttt gatagcatcg tcaatagctg ttacacctgc
    43201 ttgtgcgatg cccagattaa tcctggagga gatggcggct tttctttcct gttccttcca
    43261 gtcacataaa ttcccctttt ctgccatggc gataagcgtc tcttctatat tttttaggtc
    43321 aacggaaaat gttataccgc cggatagcga gagttgtaac cgctcaggga acaagcaaca
    43381 tagcggttca caaacataag tgctagcttt tatattaata tcagaatatc ttttcaggtg
    43441 ggcagactga gtatcaacac agagcactgt tctattcatt atctcataat agtagtgatc
    43501 ctgacgtatc ataatacata acggaatatc ttcgccatct ttaatacaga gatttgtata
    43561 ctgacactca gcatctttat agtgctgaaa atggaaattt cctctgcatg atggtgatga
    43621 taattcatat aacgcgcaaa ataaatcaaa taaacgttgc gcgtcaggcg gagaggcaac
    43681 atcacataat tcctttatat attgatcggc agtggatctt tgcgtgtcac aaaaaaaatc
    43741 tttaatcttt tcccatagtg acgtaaagaa ggagcgttga gagatagcac tttgagaaaa
    43801 catctcactc tttaaaaatc ctctcccgat agtaattggc ataatgtaga ccacaagtga
    43861 ttatatgata cttcattact ggaataggtg gtattcgaaa tattatccca tgttgcccat
    43921 cggtttgcct atcggtgaaa cacctgattt ttgctttgtc ctgaaccgtc aacattattg
    43981 ttaaaatcga cccgtggctt tagtcagtcc acgcctcctg gccatgaagt atgtcaggta
    44041 aaacgaatga aagtaaaatg gttttcttaa ttctcacatc atcatatacc atgagtaatg
    44101 tttaattaca cgctatatta tttttagaga aagtaaattg ttgctcaacc gtgtacaaat
    44161 tgtcttataa gaagttaaac tgaaagtatt attaggctaa caacaatgag atatttagcg
    44221 gcagggcagg aggcctatgc tgatagtact tatgatataa atgcctttac tctttagttt
    44281 ttgtcttaat tatatttgtt gtaacgatta gctgacgggt ttatttccag ttaggtgata
    44341 aaattataaa aacctgcgag gaggctcaaa atgaagaaat cagatggtga aattcacgaa
    44401 aagacagcat cctggggcat tttgcagtca gaatggctaa gaaaatgtgg acggctatta
    44461 ttgctgttac tttaccgttt cgttatcgga tgggcttttt tccagttact tgccatgatc
    44521 gtggcaggga tatttttgtt aggcgtctta ttatttcatc ccataatatt tgtacagact
    44581 atcgcaatta ctgagaagtt aaatcatgct tcgcttgatt tatggcatat ccttaagtta
    44641 tgcctgtggc attacggtat catcgcaggg tttattttta tggcggagtg tacgttaagt
    44701 aaaagtatac ggcaggttca gcgcttgtcc aaaaaatttg gggcacagga tttttcttca
    44761 cgcccgtgat ccgccgctgc aacctgcggt cttactgaat aatggctatg accagcagac
    44821 cgaattatct cggttcgagg gggattctat gtgtttgcac aactgcagtg aatcgtaatt
    44881 tcagtgcatt atcgccgaca atcgacgtgt tcctcactaa ttgccttcct gactatatag
    44941 tggtcttatc tttggcgaaa caatgttatt tagttatgga aggcgacaac aactgtacta
    45001 ttgattatca aatatccttt ctggtcaggt agactcgcct ttgtgaaaac atatcgttat
    45061 ctgtgctcct ggggactcac tcccttgccg cctttaagca actcgaatta ttttgggtat
    45121 agaacaggcg gcgtaatggc cataataagc aaaatataac ctctccgttt gtaataaggc
    45181 acagattaca gggggggaat gatgtttatt ttaaccatct gtttaagcgc tgtccgctaa
    45241 tctttacctg ctcaaataca taatcacccc tgtgactctc gcgaggtgta acatatggta
    45301 aaatgcgtat cttctttcct cctgttcagc ctgttgtccg ttcaggcaat atcagctgaa
    45361 aaccatattg atctccacca gccaaaagac tttgtcgata ttactacggt cgcccccgac
    45421 gtacaggtag acatgcgata cttcacttcc cataacttta ttggtcgccc cattaaaggc
    45481 tataacgcgc ctgtttgcct gttaacacga ccagccgcga acgcagtaaa gcaggtcgcc
    45541 gatcgtttac gccccttcgg acttacctta aaaatatatg attgctaccg tccgcaaagc
    45601 gcagtgaatg actttatcgc gtgggccaaa gatccttctc aaaaccaaat gaaaaacgaa
    45661 ttttatccgc aggtagagaa aaatcgtttg tttgaggaag gttatcttgc cgccagatcc
    45721 ggccacagtc ggggaagtac gcttgatcta acgattgttc cacttgacag taaaataccg
    45781 atataccatc ccggacgacc actggtgaat tgtactgcgt ccgcggcgca acgctcgcca
    45841 gataatagtc tggattttgg tacaggcttt gactgtttta gtccgttatc ccatcccgat
    45901 aatgtcatgc ttaccgctca gcaacgcgca aataggttgt tattacaaac attgatgcgt
    45961 gatgcgggtt ttacgccact ggatactgaa tggtggcact tctcccttac tcatgaacca
    46021 tacccgaaca cctggtttga ctttcccgtt aagcagagac cctgaaacgg cgttttgttg
    46081 cgaaatctaa tcattacgcc tgttggaaag caccataaca gttagcaaat cattgttaat
    46141 tttaacaact gatatacact gcggttgcca cctgcaagca gcgctcaatg agaacgaata
    46201 atgaaaaaat atcaacgtct ggcggagcaa attagagaac aaatcgcctc tggcgtttgg
    46261 caacccggcg atcgattacc ctcgctgagg gagcaggtcg ccagtagcgg catgagtttt
    46321 atgactgtcg gtcatgcgta ccagttgctg gaaagtcagg gacggattat cgcccgtccg
    46381 caatctggtt attatgtcgc gccgcatccg gtttgtcggt cagtcgcgac ggcagcgcac
    46441 gttattcggg atgaagccgt agatatcaat acctatattt ttgagatgct gcaggcgagc
    46501 cgtgatacct ctgtggtgcc ctttgcctca gcgtttcccg atccgcgtct gtttcccttg
    46561 ccgcaattga accgctctct ggcgcaggtc agtaaaaccg agacggcaat gagcgtcatc
    46621 gaaaacttgc cgccaggtaa tgcagaattg cgctatgcga tagcacgccg ttacgcgcag
    46681 caggggatta ccgtttctcc tgacgagatt gtcattaccg ccggcgcgct ggaagcgttg
    46741 aatcttagtt tacaggcggt gacggcaccg ggagactggg tggtggtgga gaacccctgt
    46801 ttctacggtg cgctacaggc cctggagcga ttgcgcctga aagcgttgtc gatacctacc
    46861 gatgttaaag aaggtatcga tcttatggcg ctggaacagg cgttacagga atatccggtg
    46921 aaagcgtgct ggttaatgac caacagccag aatccgttag ggttcacgct gagtgctgag
    46981 aaaaaagcgc ggctggttgc gttactcacg caccataacg tgacgctaat tgaagacgat
    47041 gtttatagcg aactctactt tggccgcgag aaacctcttc ctgccaaagc atgggatcgc
    47101 gacgataccg tgttgcattg ttcgtctttt tccaaatgtc tggttcccgg ttttcgcatt
    47161 ggctgggttg cgggaggaag ccatgccaga caaattcagc gtttgcagtt aatgagcaca
    47221 ttatccacca gttctcccat gcaattggcg ttagtagatt atctctcgac acgtcgatat
    47281 gacgcgcatc tgcgccgatt gcgaaggcag cttgccgaac gtaaacagca agcctggcaa
    47341 acccttttgc gccatctccc ggcggaagta aaaattcacc ataacgatag cggttatttt
    47401 ctttggctgg agctacctga gcagcttgat gccggcgaac ttagcgccaa agcgcttgaa
    47461 caccttatca gtatcgcgcc agggaaaatg ttttcaacgt ccggcgcctg gacgcgtttc
    47521 tttcgtttta acaccgcatg gcattgggga gaacgggaag aacaggccgt aaaacagctt
    47581 ggaagcctga ttcgcgagat gctgagcgct aaaagccttg tgtgaggtgg aatgcgtgtc
    47641 agctcacaac ctgactaaat ttcccgagtg tgccgggtga gcatctggcg cgccgtctat
    47701 ttttaggaaa gcggcggccc gttcgccgga aatcgattaa tgacgatatg ggaaaatgct
    47761 atgcaatatc aattactgat taatggcgtg ctggtggacg gcgagggaga aaggcagtcc
    47821 gtttataacc cggcgacagg cgaggtcata cttgagattg cggaagcgtc gcccgtgcag
    47881 gttgacgccg cagtgctggc cgccgatagc gcgtttgccg aatgggggca gaccacaccc
    47941 aaagcacggg cggaatgtct gttaaaactg gcggacagca tcgagcaaaa cgcccttgag
    48001 ttcgcccggc ttgaatcgca aaactgcggt aagcctttgc actgcgtaat taatgatgaa
    48061 attccggcaa tcgtggatgt ctttcgcttt tttgccggcg cggcccgttg tttgagtggg
    48121 ctggcggcgg gcgaatatct ggaaggacat acgtcgatga tccgccggga tccgattggc
    48181 gtggttgcct ctatcgcgcc gtggaattat ccgctcatga tggcggcctg gaagctggcg
    48241 ccagcgctgg cggcaggtaa ctgcgtggtg attaagcctt ctgaaatcac gccgctgacg
    48301 gcgcttaaac ttgccgcgct ggcgaaggat atctttccgc cgggggtgct caatgtcctg
    48361 ttcggacgag ggcaaactgt tggtgatgta ttgaccggcc atgaaaaagt acgcatggtc
    48421 tctttaaccg gttctatcgc gaccggggag catattctgc gccatactgc gccagcgata
    48481 aaacgtacgc atatggaact cggtggtaaa gccccggtga ttgtttttga tgacgccgat
    48541 ctggatgcgg tggcgcaggg tgtccggact ttcggtttct ataatgccgg acaggattgt
    48601 actgcggcgt gccgtatata cgcgcagcgc ggtatctatg atgcgctggt cgaaaagcta
    48661 gggaacgcgg tgagcagcct gaaaatgggc gcgccggagg ataagtcgac agagctgggg
    48721 ccgttaagtt cgctggcgca cctgaagcgc gtcacagcgg ctgtagagga ggcgaaggcc
    48781 ctcagccata tccgtgtgat tactggtgga agtcaaacgg aaggtaaagg ttactatttc
    48841 gctccgacgt tgctggcaga cgcaaaacag gaagatgcca tcgtgcaacg cgaggtcttc
    48901 ggcccggtgg tcagtataac cgtctttgat gatgaagatc aggttctgag gtgggccaac
    48961 gattctcgct atggtctggc atcctccgtc tggactcagg acgtcgggcg ggcgcaccgg
    49021 cttagcgcca gattgcagta tggctgtacc tggattaata cccatttcat gttggttagc
    49081 gaaatgccgc atggagggca aaaacagtcg ggatacggca aagatatgtc attgtatggt
    49141 ctggaagact acacccttgt ccgccacatc atggttaagc attaaggatc atttactgtt
    49201 cagaaaaatc gtgaaaaaat aggcgggtgt cggcggagag ggggacctcc ccgccaacat
    49261 gcgcagcaag tactcaaagg ttgaacacct caagcaaacc agccgaatct caacgagatc
    49321 agacccaaaa gtcctgcagc agcaaagaca ttaatcagca cgacggtttt actggaaaca
    49381 ttcattttcg ccacctttca tcataacccc tatgggtata gtacgggttg gcgagatccg
    49441 caataatacg taaacaggat attctgtgag cggagccgtg cattgagaac gttttgctgt
    49501 taaggctgat aaaccttgat gtgtgtcaaa taaaaagagc atattgcgcg cgttttttcc
    49561 tctggttggc gcgacatggc cgataagttt ccccgtcgca ttgctgtttt cgcttttctg
    49621 acctcaagcc cgatacaggt taccgggcat ggtttttccg ccaggtcagg ctatcagggc
    49681 aattaattgc gctctgtcta cgtcggtaac gtcctgcgga tgccgatatc ctgcgttctc
    49741 attggccagg gtatacagcg caacaagcca gtcatagaca tagcggctgg cggcgtgaac
    49801 gggctgttcg tcaagctttg ttagacgcaa cattgtcgaa cgcggcgttg cggcgaaaat
    49861 ggctgcgcct ttctgaacgc ggctggccgg gcgttgggcc tcctcgatat tggcgtagcc
    49921 gagccaggcg atgaagttac caatgatggc atgaagctgc gcgccgctca cctcctcgcg
    49981 ctgcatggtt ttctgtaact gctgaggtaa accgaggcga tagctggcgg taattaaaat
    50041 ctccgccacg gcgttgagca tctgcggttc cagtcccaga cgctgcgcat tatcccggca
    50101 gtgggcccac tggcgcagat gattgatcca cattttgtgc gcctggtagc ctgtttcatg
    50161 accttctgac gctgaagcgt gcgttggttc gtcggcaaag agatcgatcg cgtcattaaa
    50221 taaaccgctg acctgttctt ctcgcgactg tcgggtgcgc agcaacgctt cgaaattctg
    50281 taccggcggt aacagcccgg ccagcaggtc gccatgtctg gcggcctggg cctgaagacg
    50341 ccggatcacg gtttcaaccg gtagccgcgc gtcatcacac atcggtaaca gatcgcgcac
    50401 gcggcctcgc agttgttcgc gtaacgcctg taagcgcgcc tgtcgctgtg gtgccgatgt
    50461 cgcctgcgat aaccactcca ccaaacgctg catactgtgt ttatccagcg cctgcaacgt
    50521 tccccaatgc acgccaggtt tacccatcaa ctgctggacg gcttcatcca gattttgctg
    50581 ggtggcaaaa cgggcatcct gtggagtaat agcccagacg acgccgggta acgctgattc
    50641 atgctgcggc tgcgtggcgt taacccactc cagtaagtga cgggcggcag tggacgtttg
    50701 cgagcgagat gccagagcat tgcaaatcac cagaacatcg ggctgtatct gctgacggta
    50761 atgggccagc atccagccta atttcgcccg ccataacgga tgaggatgac tgtctggcgc
    50821 gaccggaata tccagtaaat caacgttatc cagtacgcta ttttcaacgg ttagcaccag
    50881 ttcgcgggta agcagcgcca gagaatcaag cgaaaggctg accgcattga gcagtcggcc
    50941 ttccttaacc ggatgcacca ccacatcgct ttgcgtatcg ctggcggtta gcgccatttg
    51001 cgtcaggaag ttttccgccg gtaagccaaa atgatcgacc agcaggctga gcggcgccgc
    51061 cagttccccg gcatggccgg tttgttgcaa catatgcgcc agcgccagcc attgctgggt
    51121 gatctctggt tgctctcccc acagtaatgc ccaggcgtgc gcccgtgtcg tgagatccag
    51181 cgcaggcaag agcgaggcaa agtgttgcca tgtcgcatca tcaatatgtt gtctggcgga
    51241 cgggaggcaa gagcgccaga aactcgcgat ggtcgctacc tcttcagcgg taacgccggg
    51301 gacgggctgc ggttggcgaa gcgattgcca tttctccagg cgtgatgtga taatggattt
    51361 ttcgacctgg cgacaaacgg gggacgagct ggtccaggca ataaagatct gcaccagttc
    51421 ggcttcactg atcaagcgca ggcgcaacgg ccagccgctc tcgtttgaaa aaatgtcgcg
    51481 cgtaaagcga atagccatat tcgctggcgc atgacccgga ttgatgtggc tgaaataatc
    51541 atagtcacgg tccggcgtga taatttccag cttgccattc tcgttaccgc atagcgtcgt
    51601 taacagatgc gcttttgcgg attgcgcata cccgtacaga ccaacgcagc catgtgatga
    51661 tgcgcaggcg gcgttgagcg ctgactcatc cgccgcggca agcgtaagtt gcgccagcag
    51721 agcgtcggct tcgtcatcca gtcgcgttgc gtaacggcgc gtgttgttaa cccactcgat
    51781 aacagcctga gtggcgttta acggttttgt catttcaggt atacactccc gctatctatc
    51841 cagtagtggc tgccgctgtg gcggcggtca gccagcgtat tcaattttaa tgtcagcgca
    51901 tcggcggcga ccggcgtccc gtcctggagc caggcatcac ttaatatgaa cgattccggg
    51961 gcgctatctt tgctactgcc gcgtaatttc agtcggacat tcagtacgcc gtcgccagcg
    52021 atggttttcg ccagttcggc ggaattaatg ctcaggcaat agagtggggt cgcaggccag
    52081 cgactgttcg caagttgacg aaagcccaac gtcacgttgc cgcgtagcgg aaaatgcagg
    52141 cgtgcgtcca gcgttgcgcc gggtttatcc aaatcgatct cgtgatacca gatgttttca
    52201 tcgcgaagcg tattaacggt attatccagt acgccgagat aacgcacagt cgaatacgcg
    52261 ccgatatcag ccgctttaaa attgaaacgc ggcaggcgta agtccagcgc caggctgcat
    52321 aacatcgcgc ccaccgcggc agtggatttt ggattgccga tacgcccttg ttgactgaag
    52381 ggataccatt catgtacctg atacttatcc atccacacaa tgcgattaac cggcaccggt
    52441 tgtaagtgcc ggatgagcgc ctgtacgcca ggtaaacagg tcggtctccc cgtcaccagc
    52501 aagatatcgc agtgatagtg ggagatcgct tcgcagaccg catgaagcgg cgttgtcagc
    52561 gtaaactgac cggccagcag agcctcctga agctggctaa actggatttg caatggcaca
    52621 ttgaatatat caaatgtcgg cgaaccagac ggtaaggcat gatcgatcgc ctgctggata
    52681 tagttcatca cgttgctcgt tgggcggcgg atcagcagat cgccaaatgt cgcatgtaaa
    52741 ccggcaaacg gatcgttaat gtcgctttgc tcccaggcgg aaagtaccgc gtggcccagc
    52801 ggcataaata attgcagcgc cgtttgctgg cgcaaaatgg cctgagtatc aattcgtccc
    52861 gaatcgccaa ataaggtcgc cagcagggcg gcggcatccg taacgcctgc ccgttgcaac
    52921 gccgtttgca gggaagggag tacgcagcgc tgaatgatat ccaatagcag atcgtccccg
    52981 gcgactttaa aaccttcgcg aaacaggaga tgaggcgtaa tttttacatt ggcccccacg
    53041 ccgtcatcta actgatagtg aacgatcgcc atatccgtcg tgccgccgcc gatatcaatc
    53101 gatgccacgc gcaacgcgcg tccggggacg acgccgggtt caggctggcg atccggtctg
    53161 gccagcgcat taaaaaagga ttcggtacgc ccggcgtaat gcgaaatggc ttcgttataa
    53221 agccatacca gttggccaca acttgcttcg tcccattcca tctgtatttc aggtactggc
    53281 accacgcttt tttcacgctg cttaggcgtg gtgaaatcct catcctgcgg atgccagccc
    53341 atggctttcc agaccagcgc cagcgcttca aacattcgct ggcggaaaat ttctcgctcc
    53401 tgtttcggca tggcggaagg cagcgttaaa atcagggtac gtagctggcg cggcgaggcg
    53461 ggaaagccga gccgcagccg ggtggcgacg ctgttaattt gccccagcgc ctgagccaga
    53521 atttcgcaca acatatgcgt catcaaggtg ctacggctgt attgcggcga aaaaaccggt
    53581 agcctttctt catgcggcag gcggaataac ggctgtccgt cgtcgttcat cagattcatc
    53641 agcggaaacg cggtggcaag cggttcgcgc tgcgttttac cgtggatctg gctaaagcgc
    53701 cagtcctgca aggcgggggt ttcatcccac aggtagcggc gcgggctgga gataccgctg
    53761 ctgccttcgg tgcccacacg ctgcatagca agggcgcgag cctcgtcgcc cacacgcaca
    53821 atagaaggcc agacaaaggc gtcgtctcgt ccgctttcga cagaaaagtg ttgcttgcca
    53881 aagcgcgctt ctgagaattc cacccggctg gtaaataaag gatcgttcag atactgcggc
    53941 tcgcttaaag aacgcacctg aagctctgcc gtctggcgta agccgtcatt cgcatcgcca
    54001 tgatcctcga tcaagacgcc gcaggtatgc gtattgccga catccagaat cagatcgacc
    54061 gggattgcgg gcgtgcttaa cgtatgtgtc acaaacttta cttccggcac cgtaagctgt
    54121 tcgcctaaca gcgtcagtaa attcaaccag tgcgcctgat actcaaaact acgcagcgct
    54181 tgttgaatgg cctgttccgg acggttttcc acctgtgagg catactgaag aaacgactcg
    54241 cgcagccagc cgtcaatcca tgtctggtca agaaaatcgg caacttcttc atcgcgccag
    54301 gcgagcgcaa aacgtgtgcc attgagcaga tcgttttcgc aaggcgccaa cgccgcaggc
    54361 atattttttg ccagctgact gtcgaaggcg agggtgatgc ggtgtgtgtt tccggcgcta
    54421 tctggctcgc tgagtttacg tacctgaatg cgcgcccagt tatccggccc gtcaataaag
    54481 gtacgcggcg gattaaaacg caggaacggc aggggaagcc agatcccgtc gagtacatcc
    54541 agagaatagt gcagcgtctg agtgctttcc ggtttcacga cttcgggttg gccgccagca
    54601 cgtcctggca acgtgtagcg cccgctggtc agatcaaaat cgaggcgcag tagcgggccg
    54661 tttgccgttt tgcgcacaaa acgtccgtag tgggccgact cttgcggcgt taagccaaaa
    54721 tcaagaaact ggacgccact gtttgcaatg agcgtgacgc tctgtttgta atcacacaga
    54781 ttgaccaaca taaaatcagg cacctatctt tttaaacgtc aacggaattg ccgcgtggtc
    54841 gccataacgg gcggtacagg ttgcgacgtc attgacgcct gctttacagg taatttccgg
    54901 catcggataa cgtgaaccgt cggtgcagcg cgcattgccg cgacttttaa tcatcagctc
    54961 gcccgtttga tgcagaccag agaaaatttc cgcccgacaa accacgttat cgccatgtac
    55021 tacgcgcgcg atgcctttgt tattttggat ctgataacgc agagagggcg gcttgccggt
    55081 aatcggatct ttgacatcca cgctgacccg ccagctaccg tttaaaaagc gcgtggttcc
    55141 aagcttcatc tgcgtattgt ccatcaccag cgcgtctttg gggatagcgg caatgataac
    55201 aggcgcttcc ggcagcggcg ccgctttggg ggcggacgtc acctcagcgc gatgcagcgg
    55261 caaatgcgcg gtgagttcag gcattggggt aacatcagtt ttcgcggtag cgacaggcgc
    55321 ggtgcgaaca ggagaggccc cgtcaacgga tgaagatggc cagaaaaaag gcgtggcgac
    55381 ggcggcgata accacggcag cgacaggtaa gctccacagc ggtagacggc gagctctttt
    55441 cgcctcagca accgggatag gtgcggcagg cttcggctcg ctaacgataa cgggcggcgc
    55501 agcaggttcc tccggcattt tcggcggctc aatgacagac gttaacaaag gttcatccgc
    55561 ctgactaaac gccgcctcta ccagcggctt ttcttcgggc tgcggctccg gctcgaccag
    55621 agggatgtcg gagatcgcct cggttacccg caggcagtcc agcacatcat cgcgtgtatt
    55681 ttcgttgaga ttaacgaatc cccagaaggt gataaccggt ttgccgttaa ccaggaaaac
    55741 atgattttcg ccgggaaatt gcgtcgcctt ctcaagtagc gaaccaaata gctggagcgc
    55801 tgttttaccg gattgcagac ttttgcgact gagtgcagcc gcgctttcaa aagtgctggc
    55861 taaataacgt aaagcccgag aacgtgtctc ttcgtcagcc gctttccacg ctatcgcctg
    55921 accttcaatc ggcgaatacc agtcaacccg atcgccatta tcgttaagtt gcggaatcgc
    55981 cagacagtca accatcgtct gctgtttacg cagacgaagc gtttcgcgaa tttgcaatgc
    56041 tgattcaaat acggcctgac cgccgccgcc cacggcctga taatcatcca gattgccgct
    56101 gcgcaagaga gattttgcca cgttgttatc ccttagactt cttcacgcgt ctactttacg
    56161 gggtctatac gcaagcaaac ggcggaagaa aggcaaaaag gcgcgaattc tcggtctatt
    56221 aagccccgtg ttttcacttg acgtaagtta aatcagagtg gcggcggcga atgaccgcat
    56281 cgggcgacaa taacgcgtat aataggcgaa tcatgctatt acagaataaa gagtaggaga
    56341 gcttatgtcg cacctggagg aagtgagcgc ccgcgtggat gccgccatcg cggagagcgt
    56401 aattgcccat atgaatgaat tgctgattgc cttgagcgat gacgctgaat tacgtcacga
    56461 agatcgttat gtgcagcagc agcgtttacg cacggctatc gcgcatcacg gcaggcaata
    56521 tcaagaagat cgggacgcgc gccgcgaaca gctcaccaaa ggcggcacga tcctgtaacc
    56581 cattaaaact ggcgcttcgc aatcagccat gcgccaatga ccagcaacag cgcgccaaac
    56641 gccggcccga ccattgcgcg taacgtgacg ccgtggctac gcgcaatatc cagcgccagt
    56701 ccgccgatta actgactggc gaccagtacc gcgatagtcg tcgcggcgcc aacgttctga
    56761 tacccgctaa tgctggcaaa tacaaaaaat gaccccagca aaccggggat caatgtccac
    56821 cagcgcacgc tggcgaccag ctcgccgaag cccgtagcgc cttgcttaaa ccacaatatc
    56881 gtcacaaata aaacgatccc taccagcgag ttcaacagca tagcgatcag aatcgtcgat
    56941 gatgtctgcg taatacgcac cataatactg ttttgtacca ccagcccgac gccggcggcg
    57001 atcaaaaaga taagcgtcag cgactggttc atcagcaggc gtccggcgcg gcgtgttcat
    57061 caagctggag ctgcataaac gtaagatcta accaacggcc aaattttacg ccgacctgcg
    57121 gcatttgcgc ggtgacggta aatcccagcg aatgatgcag gcgtatcgag gcggcattct
    57181 gtgactcaat accggccacc atcacatgct tgccgcagcg tcgggcttcg tcgatcagtc
    57241 tgctgagcag ttttcgcccc agtcctttcc cctggtgcgc cggatgaaca taaaccgagt
    57301 gctcgacggt atagcgaaaa ccgtcgaaac tgcgccaatc gccaaatgat gcatagccag
    57361 tcaccacgcc attttcttcg cttaccagca ccggatagcc cagtaattga cgggcctcat
    57421 accaggcaag gcgattatcc gtatcgaccg tccgatcgtt ccagatggcc gcagtatgta
    57481 ataccgcacg gttatagatt tcggtaatcg cggcgcagtc tgctttatcg gcaaagcgaa
    57541 tcgtcatagg gaaccccagg gaatgtttac gatagtgtta gaaatactat tgaaggcggc
    57601 ataaatcaac gaattagcgc aagaattcat atttagcgag aggggaaaga aagtcgttca
    57661 taaaagcgca cagcctgata tctgagagtg tttaactccc tcagaaagct aatgttcgac
    57721 tattattgat ggattatgcc aggcatgagg agaatagaat gaagcaacag accaaccgaa
    57781 atcgtcgttg ggttttggcc tcgcgtcccc acggcgcgcc gcagatggat aacttccgcc
    57841 tcgaagaaga tgacgtcgcg acgcccggtg aagggcaggt gctattgcgt accgtttttt
    57901 tatcactcga cccttatatg cgtggccgca tgagcgatga accctcttat gcgccgccag
    57961 ttgaacctgg ctgcgttatg gttggcggta cggtcagtcg cgttgtcgcg tcgaatcatc
    58021 ctgattaccg accagacgaa tgggtgttga gttacaatgg ttggcaggat tatgacattt
    58081 cagatggcga agggttggta aagctgggtg ataatccgca acatccttcc tggtcgttgg
    58141 gagttttagg gatgccgggg tttaccgcct atatggggtt actggatatc ggccagccga
    58201 aagagggcga aacgctggtt gtcgccgccg ccaccggccc cgtaggcgca acggttgggc
    58261 aaattggcaa gctgaagggc tgccgggtcg tgggtattgc cggcggcgcg gaaaaatgcc
    58321 gtcatgcgac agacgttttg ggatttgatc tgtgccttga tcatcacgct gataatttcc
    58381 cacaacagct tgcgcaggcc tgcccgcagg gtatcgatat ctattatgag aatgtcggtg
    58441 gtaaagtctt tgacgccgtc ttaccgctac tgaatacgtc ggcgcggatt ccgctctgcg
    58501 gtctggtcag cggctacaat gcgacaacgt tgccggacgg tccagacaga ctgccactgc
    58561 tgatggcgac attacttaaa aagcgtattc gcctgcaagg ttttatcatc aaccaggact
    58621 atggtcaccg gatacatgag tttcagcaag aaatggggcg ttggatcaaa gaagggaaaa
    58681 tacattaccg ggagcagatt actgatgggc tggaaaatgc gccagaagcg tttatagggc
    58741 tgctggcggg gaagaacttt ggcaaagtcg tgatacgttt agcggacgat gcgtaaagaa
    58801 aaaatggcgg cattatgtcg ccataaaaat gtgcaaattt taaaattgcg gctttactta
    58861 tattcatcat tcagatcgcg gtggggcagc ttatctccct cagcggcctg aaccggtcaa
    58921 aaatctcgat acatgaagga atgacggaga taaaacggtt gccataaaga aacctgtatt
    58981 gttgtaaaag atgagaatat cacgcaagta aattatcact tttatttatt tggccgttca
    59041 ggtctggatt atctttttta caattaagtt ccgaaacttc ttcgggactc gattgcgatg
    59101 ttgttctgcc aagaggtgaa ggaaggaaaa tgccgggtac ggaaaaaaca caacatataa
    59161 gcctgaccac acaggttgaa aatcggttaa agcatcaatt gtctattggc gcattaaaac
    59221 caggcgcaag gcttatcact aaaaatatcg ctcaagagtt aggcgtcagt attacgccgg
    59281 tgcgtgaggc cctgttaagg ctggtctctt ccagtgcttt ggcggtggcg ccagcacagg
    59341 cgtttatggt gccggagatc tcgctggaaa gtttgctgga aattaatacg attcgtactg
    59401 ccctggagga gatggcggtg gtcgccgctg cgggtaagat taccccggat cgcgagcaga
    59461 cgctgaatgc gctattagat gaatttcaac aggcgctgga aagtggcgtt atggagaaaa
    59521 ttcttttggc caaccgcgca ttccgctttg agatctacca ctacgcggat atgccaacgc
    59581 tgtatgccat gatcgagcaa ttatgggtac gcctggggcc aagtctgcat tttttatatg
    59641 ataattttaa acttgatgat tatcaaaacg gcgttaatct gtacagaaaa ttgcttaatg
    59701 cgttagtgac tggtgataaa gaagccagtc gccactgcct acagaacgtt ttgcaacaaa
    59761 acgtagcgac gattaaaaat cagtacttca tgtaactttc atgaaactat gactaatcaa
    59821 tagcggggat gccccgctat tgccggatat ttattcaaat tgccatgcca gattaatccc
    59881 cacgccatag ttacgccctg gcgctggctc ataatatcgg ccattagatt cattaacgat
    59941 caccgaaccg atatattctt catcaaatag attatctacc cgcccaaaaa tatcgacggt
    60001 aagctgactg taattaaatt tataccctgt atttagtcca acaacggtat acgaaggcgc
    60061 tttggcggta ttttcatcat tggccatgat atcgcccata taccgaacgt ctgttccggc
    60121 gtaccacccc tcatccggga taaaacctaa tgaggcgaat cccatattac gggcgatgcc
    60181 gggcatccgg tttccatcac agttttgccc ctgacaaacg ttactgcgat aggtcgcatc
    60241 cagccaggtc catgatgctt tcacccgcca gtcgccggcg aagcgctggt ccaacgcgag
    60301 ctctgcgccc tggcggcgcg ttttgcccgc gtttttgtag gtagtgcgtc ctcccatact
    60361 actggcgacg acaatttcat catcggtatc ggtttgaaat aacgcggcgg tcaacaagcc
    60421 attgccaatc cgcgttttac tgccgacttc caccgtatca ttggtcgacg gtttgaggtc
    60481 aaagttgaac ccgctttggc cgtcagcgcg ataagaaagt tcattgatag tgggagtttc
    60541 aaatccgcga ccggcagcaa gatagagatt ccaggcgtca gttaacgcat attttagcga
    60601 tccggcgggt agccagtggt gatagctggc gtcgccgctg tcatcgccat tgccgggcgc
    60661 gatatagtga tcgttagaat cgaaccacac ggaactgtag cgcacgccag catccagcga
    60721 gagtttttgc gtaagctgcc actgggtttg cagataagga tcgacattcc acatcaggtt
    60781 acgctcatcc cgccgtaaat cgcctttatg cccgaactca ggggtgccgt tgttgagacg
    60841 gaaattattg taacccttgc ggttttcgct catgttttca tagtttaacc cgccagtgaa
    60901 ggtgaccggc acacctaatt ctccccggtg agtccagcgg gaatcaattc cctgatagtg
    60961 gcgttgcagt gtaattacgc cgccagcctg ggctggtttt agctgtgcca ccaggggaat
    61021 agactggtat tgcgtggttt cccgctctcc ggcgtaggcc atcacgctga tatcatcctg
    61081 cgcgctgagc tgacgttcat aacgcaatcc tgcctgagtt tgtttgatgg ttttacgcgt
    61141 attgtactgt tcagcgcgcg gcgcctgctg cggatcggct ttccattcag attcggtaag
    61201 tccgccggga tcgtccgcct taatgtccac actattaaaa atcagcgaaa gtttactgac
    61261 atcgtcaagg cgcacgccca gtttggcatt agccagattt tttcgcgcgc cgctgtgatc
    61321 gcggtagccg tgggtggtga aacgggtagt cgataccgtg taatccacgt cgccaggctg
    61381 tgtgccgtcc cccatcgcgc ccgtggcttt taacccatag cgccagcttc cataactgcc
    61441 gtagtagctg ctggcctcaa gggtgggcgg ctgtctcccg gtttcggtgg tgacatttat
    61501 cacgccgccg gaagcattgc cgtatagcgc tgagaagggg ccgcgtaaca cttcaacgtt
    61561 ttgtatgctg ttaatatcaa tatttgaaat ctggccttgt ccatccggca tggtggcggg
    61621 aatgccatca acatacagac gaatgccgcg cacgccaaag gcggaacgcg agccaaatcc
    61681 acggatagag atttgcagat cctgcgcgta gttctgccgg ttctgcacct gcaatcccgg
    61741 gacgctggtt aaagactcag ataaattaac gcgcggcgtc gccagacgca tgtcttctcc
    61801 ctcaatgacg ctaacggcgg caggtgtatc cagctcggat acggtttgcg gcgttgcggt
    61861 gactatcatg gtttgttcat tgggcgcgct ggcggcctga aggaccgggg agaaggtcag
    61921 aggcaataag agggcgggat aaagtcgctg tctaacggaa ataattttca tgaaaatgcc
    61981 ggataaatgt aagcgtatca acggaaaacg tgacattaag ggtagtcaat atgtaaagtt
    62041 ttgaaatttt aatcgcacat taagttaaga aaatgtgcgg tatttaagag ccatgacatt
    62101 cgcaggcgag gaaaagctcc actttctgat aaataatgat tattattctc aacttataat
    62161 aagtgcggaa cgaagatccc gcgcagcgaa gtagtgtgaa gcagctatac acgtttttat
    62221 caaaaggagt cgtcatgcac ttacgtcatc ttttttcgcc gcgcttgcgt ggttctttat
    62281 tgttaggttc gctcctcgtc gcatcctcat ttagcacgct ggcggcggaa gacatgctgc
    62341 gtaaagcggt aggcaaaggc gcttatgaga tggcctggag tcagcaagaa aacgcgctct
    62401 ggctggctac atcgcaaagc cgtaaactgg ataaaggcgg cgtagtttat cgtctcgacc
    62461 cggtgacgct ggaaatcacg caagcgattc ataacgatct caagccgttc ggcgccacca
    62521 tcaatgccgc gacccaaacg ctgtggtttg gcaataccat taacagcgca gttaccgcga
    62581 ttgatgccaa aacgggtgat gtaaaaggtc gtctggtact tgatgcgcgc aaacgtactg
    62641 aagaggttcg tccgttacag ccccgtgagc tggttgccga tgcggcgacc aacacgatct
    62701 acattagcgg tgttggtaaa gagagtgcta tttgggtagt ggatggcgaa accatcaaac
    62761 tgaaaacgac gatcgaaaat accggcaaaa tgagtacggg tctggcgctc gacagtaaag
    62821 cacaacgcct gtacaccacc aatgcggatg gcgaatttat caccatcgat accgccagca
    62881 ataaaattct cagtcgtaag aagttgctgg atgacggtaa agaacacttc tttattaatc
    62941 tgagtctcga taccgcaggt catcgcgcgt ttatcaccga ctcgaaggca actgaggttc
    63001 tggttgtcga tacccgtaat ggcaatattc ttgccaaaat cgcggcgcct gcctctttgg
    63061 ccgtcctgta taatccgaca cgtaacgagg cgtatgtgac gcaccgtcag gcagggcagg
    63121 tcagcgtgat cgatgcgaag acctataacg ttgttaaaac gttcgatacg ccgacgtacc
    63181 cgaatagcct ggcgctatcg gcagacggta aaacgctcta cgtcagcgtg aagcagaaat
    63241 cgacacgtga acaagaagcg acgcagccgg atgatgttat tcgcattgct ctgtaaatag
    63301 ggtatggagg gggaaacccc tccagtcatc tctttaaacg caccgatacg cctcgttaaa
    63361 ccccgccgat agcctgatga ttctgtgaga attacactac ctttttgcag tcgttaactc
    63421 attatattca cgaggaaaat atgaaaaagt tatttatatg ctcaggtttg ggcatgatgt
    63481 tttttatgct tgcgggttgt acaaccaact atgtgatgac gacgaagaat gggcaaacga
    63541 tcgtaactca gggtaagccg cagttagata aagagacggg aatgaccagt tataccgatc
    63601 aggaaggcaa ccagcgggaa attaacagca atgatgtggc gcagttgatt aaggctgact
    63661 aagcattggg cgcgatgcgg tgttggcggc aacgcgcatt aaacccggca ggcctgaggc
    63721 tgccggggaa gggtaatgtt atgtcgctgc ttcttctttc aatacgacac tctctgtcga
    63781 atccgccgtc actggcgcag tgcgatggat ctccgccacg cgacgtcgca cgccaaacca
    63841 gccggcgacc agcagaatag cgatcagcgg caacgaggcg atagtgtaag ttccattcgg
    63901 gtagtcaaac gccatgagta ccagcacgct taataaaaac agcagcgtta accaggaggt
    63961 gaaaggcgcg ccgggcagtt taaaactgac gtctgcggct ttgccttctt ttatcgcctg
    64021 gcgtaaacgc atctggcaca ccatgataaa cgcccacgac gcgataatgc cgagcgaggc
    64081 aaaattaaga acgatctcaa acacgcggga ggggaccaga taattaagga acacgccgac
    64141 cacgtaaacc accagagtcg ccagaatacc cgcatagggc acatgctgac ggctcatttt
    64201 cgccatgaat ttcggcgcgg acccccccat cgacattgaa cgtaaaattc tccccgtaca
    64261 gtaaagcccg gagttcaggc tggaaagcgc ggcggttaac accacgatat tcataatact
    64321 gccgatataa ggcacgccaa gtttagaaaa gaaggtgaca aacggacttt gccccgcctg
    64381 gtaggcgttc cacggcagca gcaaaaccag caatacgacc gatcctacat agaaaagacc
    64441 aatacgccag atcacgctat tgatggcttt tggcaccatc gtctgtggat ctttgcactc
    64501 cccagcggcg gtaccgacca attcaatcga agcaaaagcg aacaccacgc cctgaatcag
    64561 taccagcgcg ggcaacaggc cgtgcgggaa aaagccgcca ttatctgtaa tcaggtgaaa
    64621 accggtggca ttaccctcaa gcggttgacc ggtaccgaga aaaatcgtgc ctaccaccag
    64681 gaagataaca atggcgagta cttttatcag cgcgaaccag aactccattt cggcaaacca
    64741 ttttacgccg atcatgttca tggtaccgac aatggttaac gcgccgagcg caaacaccca
    64801 ttgcggaacg tcgccaaatg cgccccagta gtgcatgtat aacgccactg cggtgatatc
    64861 gacgatcccg gtcatcgccc agttaataaa gtacatccag cctgctacgt aggccgcttt
    64921 ttcacccaaa aattcacggg cgtaggagac gaagctcccg ctggaagggc gatgcaatac
    64981 cagttcgccc agcgcgcgta aaatgaaaaa agaaaaaatg ccgcatatca gatagaccag
    65041 cgccagtgcc ggtccggcca tttgcaatcg ggcgcctgca cctaaaaata aaccggtgcc
    65101 aatcgcgccg ccgatagcaa tcatctgaac ctgacgattc cccatcgctt tgtgataccc
    65161 ctcttcatgg gcgttcagcc agcgtcgttt cgccgcatgt tgttctgcgg cgtgcgtagt
    65221 ctgtgttttc attacgttac ctgttatagc ctgtcctgac agaaaaattc cttatgccgc
    65281 gacgggcgct caccaatcga ttgcctgcaa tggcgaatgc cgcttttccc tgattctgtg
    65341 acagggataa aaccgccggc ggagcatcct acctgcaatt gttaaatgac gcaaaacata
    65401 cggaaagaac aaaatgagga tgtcgtgttt atttgtgcgg tcagatgtgg tgcggtgtgg
    65461 tcacgattca gccagataag ctttcagcac aaatccgcag tgattgcgtt gcgcaataat
    65521 taatcagagt taatccctgc agggatttat ggtcatagat atgacctcga acgataaacc
    65581 acctgacgat attgaagcag cataagatca ggccgttgcg cctgttattc tcattttctc
    65641 ctgaaaatgt atgcctttga gcaattttgt tgattgacat atcgtcataa tgagagagga
    65701 gtaggacata taaagctatt gagcaaaatt tgaaggagca ggatatgcca tatacatcag
    65761 tttctaccta tgccagagct ttatcaggaa ataagctacc tcatgttgct gcaggagatt
    65821 atgaaaataa attatcaaca aaaatcatga aaggcatctt gtatgtgctt accgcaggac
    65881 tggcctacgg atttacgcga gtaattgaac attattgcaa tgttacgcct aaagttgatg
    65941 agttctgtgc caatgcaggg aatatccata atcaccttgc agatgctgta cgtgatgaac
    66001 aatttattat agatgtcgag ctttctgatg gtcggatgtt aacattcgaa caactctcgc
    66061 tgatggctgg acgtgagcca atcgtcagga tatcggatgg cgaacatagc gttgaggtta
    66121 aggggtcctt tgaagatatc tgtatgagac tggaagaggg cttttttgaa gcgccagcat
    66181 actatggtta tgatattgat gaaaaatata aaaccgtcag agagcgaata gcagcatata
    66241 atgccttacc tcaggcatta ggcgccattc cgagtttaaa atattatacc gatcgggcca
    66301 acgacatgcc ggaggcgaaa gcgcaacggg cggccgacat aaaagatcgt taccataact
    66361 atttagacaa gtattaaaaa gcgtttatgt ttagccagtt ttgttagaaa tcagactcgc
    66421 tgagctggcg ttaaaaattt taacacgccg ctattttggc ggcgtgtcgc aaagagattc
    66481 tcagaacccg atttccgttt atacgccaaa attctacgta ccccggcggc tgtagccggc
    66541 ctgtcttatt ttttcaaaag tatccaacgc tattccacgg atagggtatc ctgttgcgca
    66601 gcgatatcca cctcagcctg tgtgccgaac gcaagcatta atgttaatgg aagcctcaga
    66661 tgacctcttt tttacatgct tattttacgc gattaaattg tcagccgttg gggggtccta
    66721 cggttgaagc gctcagaacg cttcacttag cgcacaactg cgcgattcct tttgaaaatc
    66781 tggatgtgct actgcctcgt gaaatacagc ttgatgagac ggcactagag gagaaactgc
    66841 tttatgcccg acgcggtgga tactgttttg aactgaatgg cctgtttgaa cgcgcgttac
    66901 gcgacatcgg ttttaacgtc cgaagcttat tggggcgggt cattctgtct catcccgcca
    66961 gtttaccgcc gcgcacgcac cgtttgctgc tggttgatgt tgaggatgag cagtggatcg
    67021 cggacgtggg gtttggcggc caaacgctaa ccgcaccgct tcgtctgcag gctgaaattg
    67081 cccagcaaac gccgcatggc gaataccgcc tgatacagga ggggagcaca tggattttac
    67141 aattccgcca ccatgagcac tggcagtcga tgtactgttt tgatctgggg gtgcagcagc
    67201 agagcgatca tgtaatgggc aatttctggt cggctcactg gccgcaatcc cattttcgtc
    67261 atcatttgtt gatgtgccgc catttgcctg atggcggcaa gctgacatta acgaatttcc
    67321 acttcacgcg ttaccaccag ggacatgccg ttgaacaggt caatataccg gatgtaccgt
    67381 cgttgtatca gttacttcag cagcagtttg gtctcggcgt aaatgatgta aagcacggtt
    67441 ttaccgaggc ggagctggcc gcggtaatgg ctgcatttga tacccatccg gaggcgggaa
    67501 aataattttt tgccgcgagg atttgcgggc ctgacaaaga ttaaaaagta atggcccatt
    67561 cggcatgaaa cagaatgacc gcctggccgg agatggtgac gttttccggc tggttatcgc
    67621 gaatggtgac ggtaacatca acagtaccct ctttgcctaa agcgcgcccc tgatggcctt
    67681 gaatctgtag cgttttaccg tcatgcgcca tcaggccatg atggacgagc catgccccca
    67741 tcgggccatt ggcgtttccc gttaccggat cttccacaat tcctatcgcc ggggaaaaca
    67801 ttcgcccatc ggtttcgttt tttcccggac gaatctggaa aggaaaaaag ccgttacagc
    67861 caatttgctg gctgattgcc gtcagggctg ccagattcgg cgaaagggca tcaatatcaa
    67921 cgtctggttt gagcaggatc atcacttttg catgtcctgt tgaagccacc tgaattggcg
    67981 ctcccggcac gatatcatct tcagtcaggt tcagtgcggt gatgatggca gcccgaatct
    68041 ctccgactag cggtggttca aaagagggct gaccttgttc cagcgtgatg cgatagtcgt
    68101 tgtgttcggc atgaatttca acgcgatgac ggcccgctaa cgaggtttgc cagacggtgg
    68161 tgtttcccaa ccccagtacc gttgcccgaa cataatgcgc ggccacagtg gcatgaccac
    68221 agatggggac ttctactgtc ggtgtaaagt agcgtatgcg cacatcactc tcttcgcttt
    68281 ttagcaaaaa ggcggtttcc gagtgacgaa gttcacgggc aatcagctgc atctgcgcgt
    68341 cgcttagcgt atccgcatgt aagacaacgc cagcagagtt gccgcgaaag ggttcgctgg
    68401 tgaaggcgtc aacatggtaa atctgcggtt tcattgatgt tctcctttga ctgaagaatc
    68461 atcatagcct gtgcgttgcc gaatgacgac gcccaggcgt ttttctttgc ccggtaagcg
    68521 tacccccggt caaagagaat tagcggcggg tacgaacaat ctggtagcga cgggtgaaat
    68581 actcgaacgg cgcgctccag acatgaacca gacgggtgaa cgggaagagc aggaaaaatc
    68641 ccgcgattcc tgaacaatct gcttggtgac actgtcactt gtaagcgtac tgcccgccag
    68701 cgtcagcagg gcgtcaaata gttgatacca cggcgctcct cgctgtttca gacgaccgcc
    68761 cagtagcgcc agaatagggg caatattctg taatccctcg cgcgcttccg cttccggcaa
    68821 cacgcttaag tactccagat agagcggcag gtgatccggc agttcgcggc agttgaggtg
    68881 caggcccacg gtttcatact ggcttaacaa atcgaccatc gcctggccgc gatcgcggga
    68941 ctccgcatga acatgctcga ataacagcaa tgaagtggcg cgcccgcggt caaacacttc
    69001 gcaccattct gcttgtttat ccagtaacgg cgcataaagc agctcgcgag tgaagttggc
    69061 cagcattggc gcatcgtgtt ggattagggc aagcgcttca tcccgacatt cccacaactc
    69121 gtcgtccgga tactccatca acaggccaat cgctttgagg atttgcatta ttccccctcc
    69181 gctttatcac gtacttcggt gatattgatg gcatcaatac ggctactgtt gaacaggttg
    69241 aatttggtat ccgagccgtg acaaccgtcg ccaaaagtaa agccgcagcc gttgcgctcc
    69301 ggaaaggcat cgcgcgccat ttcccggtgg ctggtgggaa tgacaaaacg atcttcataa
    69361 ttggcaatcg ccaggtagcg atacatctct tcaacctgtt gtacgctcag accgacttcg
    69421 tcaatggcgc gggtatccgt cacgccttca accgtctgcg agcgcatgta gtggcgcatc
    69481 gccatcatcc gctttagcgc ccgaatgacc gggccggtat cgcccgcgct gagcatattg
    69541 gccaggtact ggaccggaat acgcagcgtc tccaccgccg gcagaatatt gccattgtgc
    69601 ggcaacccgc ccgcgtcggc gtatgactgg atgggcgata gcggcggtac gtaccagacc
    69661 atcggcaggg tacggtattc cgggtgcagc ggaagcgcca gcttccagtc catcgccatt
    69721 ttgtacaccg gcgaccgttg ggcggcgtcg atgacgtttt gcgggatgcc ctgtttaagc
    69781 gcctcttcga tgaccgccgg atcgtgcgga ttgagaaaca catcgcactg acgttcatac
    69841 aaatctgtct cgtgttcggt actggccgct tcttcaatcc tgtcggcgtc gtagagcaga
    69901 acgccaagat aacggatgcg cccgacgcag gtttccgagc aaacggtcgg ctggccggat
    69961 tcaatacgcg gatagcaaaa tatgcatttc tcagacttgc cgctcttcca gttaaagtag
    70021 atttttttgt atgggcagcc gctgatacac aaacgccagc cccggcattt atcctggtcg
    70081 attagcacga tgccgtcttc ttcacgctta taaatagcgc cacttgggca ggtggcaaca
    70141 caactggggt tcaggcagtg ttcgcacagg cgcggcaggt acatcatgaa ggtgttttcg
    70201 aactgaccgt acatctcctt ttgtatgttg tcgaagttgc ggtcgcgggc gcgtttttca
    70261 aactcgccgc cgagcagctc ttcccagttt ggcccccaga tcaccttgtc catccgtttt
    70321 ccgtcgatca gtgaacgcgg acgggcagtg ggctgatgct tactctccgg cgctgtatgt
    70381 aaatgctgat aatcgaaggt aaagggttca tagtaatcat cgatttgcgg aatcaccggg
    70441 ttggcgaaaa ttttgctaat tacccccatt ttgccgccca gacggggcct tatcttgcca
    70501 ttaacatcac gaacccaacc gccttgccac tcctgctggt cttcccaatt tttgggatag
    70561 ccaatacccg gtttagtttc gacgttattg aaccatgcgt attccatccc ttcacgtccg
    70621 gtccagacgt ttttacaggt gacggagcag gtgtgacagc caatacattt atcgagattc
    70681 agtaccatcc caacctgtga gcgtattttc attttttcgc ctcctgtacc tgatcccggc
    70741 cctcatcatc cagccagtta atgtttttca tcttcctgat catgatgaat tcatcgcgat
    70801 tcgaacccac ggttccgtaa tagttgaagc cgtaagccag ttgcgcatag ccgccgatca
    70861 tatgcgtcgg ttttggacag acccgggtca cggagttatg gatcccgccg cgcatcccgg
    70921 tgacttccga acccggaatg ttcataatcc gctcctgggc gtggtacatc atggtcatac
    70981 ccggcgggac gcgctggctg accaccgcgc gagcggtaag ggcgccatta gcgttgaagg
    71041 cttcaatcca gtcgttatct tcaataccca gttcacgggc atcggcttcg ctgatccaga
    71101 caatcggccc gccgcgcgac aaggtcagca tcagcaggtt ttcgctgtag gtggagtgaa
    71161 ttccccattt ctggtgcggc gtcaggaagt taagcgcttt ttccgggaaa ccgttgggcg
    71221 gaatttctcg catttcgctg acgctgcggg tatcaatcgg cgggcgatat gccaccaggc
    71281 tttcgccaaa agcgcgcatc cacgcatgat cctgatagag ttgttgccgc cccgacaacg
    71341 tgcgccacgg gatcagttca tgtacgttgg tatacccggc gttataagag acatgctcgc
    71401 tttccagtcc tgaccaggtc gggctggaga taattttgcg cggttgcgcc tggatatcac
    71461 gaaagcgaat tttctcatct tctttattga tggccagatg ggtgtgctcg cgcccggtca
    71521 tctcgcccaa cgcctgccag gctttcaccg ccacctggcc gttagtttcc ggcgctaagg
    71581 caagaatcac ttccgaggca tccagcgcgg tgtcgatgcg cggacgtcct ttcgccgggc
    71641 catcgtgttt ggtgtaattg agcttaccga ggaaatcgac ttcatcttgc gtattccagg
    71701 caataccctt accgccgttg cctaatttat ccagcagggg acccagcgag gtaaaacgtt
    71761 cataggtggc cggataatcg cgttcaacca cgacgatatt gggggcggtt ttgcccggaa
    71821 taagttcgca ctcgccttta cgccagtcga gaatatcaaa tggctgcgcc agttccgccg
    71881 gggaatcatg ctggagcggg tgtaacacca catcggtttc ctgtccgagg tgtccgacac
    71941 acacttcaga aaaggcgctg gcgatgcctt tgtagatctc ccagtcgctt ttggattccc
    72001 aggcaggatc gaccgcggcg gaaagggggt ggataaacgg atgcatatcc gaggtattca
    72061 tatcgtcttt ttcataccag gtggcggtcg gcaagacgat atcggaaaac agacaggtac
    72121 tggacatacg gaaatcaagc gtgaccaaca gatcgagctt gccctcaatc gcggcggact
    72181 gccattccac ctcttcaggc ttaattcctt cgctggaacc cagcgcttcg ccctggatac
    72241 cgctgtcggt gcccagcaga tatttgagca tgtactcatg acctttcccg gaggagccga
    72301 gcaggttaga gcgccagaca aataaatttc gcgggtgatt atgaccactg tcaggccgtt
    72361 cgcaggcaaa acggatagcg cctgatttca acacctgcat ggtataatcc gccgcagaca
    72421 gcccggcttt atcggcgctc gctttcacgc tgagcgggtt aagattaagc tgcggcgccg
    72481 agggtagcca gcccatacgt tccgcgcgca cgttgaaatc gatcagatgt ccggtaaatt
    72541 tagtcggatc ggccaacggc gacagcaact cttgcgcagt cagtttttca tagcgccact
    72601 ggctggcatg gttgtagaaa aacgaggtac t
//
LOCUS       DAGWFR010000008        69693 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.008, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000008 DAGWFR010000000
VERSION     DAGWFR010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 69693)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 69693)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..69693
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.008"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..824
                     /gene="dgaE"
                     /locus_tag="MOX77_000585"
     CDS             <1..824
                     /gene="dgaE"
                     /locus_tag="MOX77_000585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="D-glucosaminate-6-phosphate ammonia lyase"
                     /protein_id="HCA3356232.1"
                     /translation="PDSTGMANEVVMLRGHNVDYGAPVTSAIRLGGGRIVEVGSSNLA
                     ARWQLESAINEKTAALLYVKSHHCVQKGMLSIDDFVQVAQANHLPLIVDAAAEEDLRG
                     WVVSGADMVIYSGAKAFNAPTSGFITGKKTWIAACKAQHQGIARAMKIGKENMVGLVY
                     ALENYHQGQTTVTAAQLQPVAEAISAIHGLYADIEQDEAGRAIWRIRVRVNASELGLN
                     AQDVEAQLRGGEIAIYARKYQLHQGVFSLDPRTVAEGEMALIVARLREIAEHAAD"
     gene            811..1554
                     /locus_tag="MOX77_000586"
     CDS             811..1554
                     /locus_tag="MOX77_000586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydro-3-deoxy-phosphogluconate aldolase"
                     /protein_id="HCA3356233.1"
                     /translation="MQQINFYRQRVAINVLAKDIANAKAIYEAAEGHAVIGVLSAQFA
                     TVEEGVPEVKRWMAEVPSISVGLGAGDPAQYYKAAMIAAHTHPAHVNQTFTGSGFAAG
                     ALAATGGEQTHINALVSPTGTPGEVVISTGVSSSQGMPARVSCEAAVRMMQDMGAHAA
                     KFFPMGGEKSLPELYALATTAARHGMTLIEPTGGISLDNFGIILQTCLEAGVPRVMPH
                     VYSSIIDPQTGNTRPEDIIQLMEIVKALV"
     gene            1790..2731
                     /locus_tag="MOX77_000587"
     CDS             1790..2731
                     /locus_tag="MOX77_000587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rpn family recombination-promoting
                     nuclease/putative transposase"
                     /protein_id="HCA3356234.1"
                     /translation="MKKSPTSTPHDAVFKTFLRHPDTARDFLNIHLPHLLRIRCDLTT
                     LKLAPDSFIEKNLRAFYSDVLWSLKTCEGDGYIYVVIEHQSTPDAHMAFRLMCYATAA
                     MQRHLDAGHKTLPLVIPMLFYHGAKSPYPFSLCWLDEFGDPALARQLYATAFPLVDIT
                     VVPDNEIMQHRRIAMLELVQKHIRQRDLMGLVERLAVLLITGNANDSQLKALFNYLLI
                     QHGSTPRFGKFIREVARCVPQHKERLMTIVDRIRESGRRKGKREGVQQGIQQGIHQGK
                     QEEALRIAHTMLEQGIEREMVLMITGLSDEEIKAKRH"
     gene            complement(2774..3676)
                     /locus_tag="MOX77_000588"
     CDS             complement(2774..3676)
                     /locus_tag="MOX77_000588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HCA3356235.1"
                     /translation="MGSTRKGMLNVLIAAVLWGSSGVCAQYIMEQSRMSSQFLTMIRL
                     LFAGLILVTFSFMHGDKIFSILKNRKDALSLLIFSVVGALTVQLTFLLTIEKSNAATA
                     TVLQFLSPTIIVAWFALARRTRPGILVLTAILTSLIGTFLLVTHGNPTSLSISSGALF
                     WGIASAFAAAFYTTWPSRLIAQYGTLPVVGWSMSFGGLILLPFYAKEGTHFAVSGSLI
                     LAFFYLVVIGTSLTFSLYLKGAQLIGGPKASILSCAEPLSSALLSLLLLGISFTLPDW
                     LGTLLILSSVILISLDSRRRARAA"
     gene            4182..4877
                     /locus_tag="MOX77_000589"
     CDS             4182..4877
                     /locus_tag="MOX77_000589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MgtC family protein"
                     /protein_id="HCA3356236.1"
                     /translation="MEERMLMFPYILNLLAAMLLGALIGAERQWRQRMAGLRTNALVA
                     TGAAVFILSSMTTSPDSPGRIAAQIVSGIGFLGAGVIMREGMNVRGLNTAATLWCSAG
                     IGVLCGLGQFKNALAATIIILCANILLREAAQRINQLPVSAEAEKRYILKVTCNKEDE
                     SAVRQWLLNIVKEAAICLQGLGSVPAQEQGYKEIRAELVGHADYRKTRELIISRIGDN
                     DNITAIHWSIDSQ"
     gene            5097..7823
                     /gene="mgtA"
                     /locus_tag="MOX77_000590"
     CDS             5097..7823
                     /gene="mgtA"
                     /locus_tag="MOX77_000590"
                     /EC_number="7.2.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium-translocating P-type ATPase"
                     /protein_id="HCA3356237.1"
                     /translation="MTDMNIENRKLNRPASENDKQHKKVFPIEAEAFHSPEETLARLN
                     SHRQGLTIEEAGERLKVYGRNEVAHEQVPPVLVQLLQAFNNPFIYVLMALAGVSFITD
                     YWLPLRRGEETDLTGVLIILTMVSLSGLLRFWQEFRTNRAAQALKKMVRTTATMLRRG
                     PGNIGAVQEEIPIEELVPGDVVFLAAGDLVPADVRLLASRDLFISQLILSGESLPVEK
                     YDVMADVAGKDSEQLPDKDKSLLDLGNICLMGTNVTSGRAQAVVVATGSRTWFGSLAK
                     SIVGTRTQTAFDRGVNSVSWLLIRFMLIMVPVVLLINGFSKGDWVEASLFALAVAVGL
                     TPEMLPMIVSSNLAKGAIAMSRRKVIVKRLNAIQNFGAMDVLCTDKTGTLTQDNIFLE
                     HHLDVSGVKSSRVLMLAWLNSSSQSGARNVMDRAILRFGEGRIAPSTKARFIKRDELP
                     FDFVRRRVSVLVEDAQHGDRCLICKGAVEEMMMVATHLREGDRVVALTETRRELLLAK
                     TEDYNAQGFRVLLIATRKLDGSGNNPTLSVEDETELTIEGMLTFLDPPKESAGKAIAA
                     LRDNGVAVKVLTGDNPVVTARICLEVGIDTHDILIGTQVEAMSDAELASEVEKRAVFA
                     RLTPLQKTRILQALQKNGHTVGFLGDGINDAPALRDADVGISVDSAADIAKESSDIIL
                     LEKDLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLL
                     IQNLMYDISQLSLPWDKMDKEFLRKPRKWDAKNIGRFMLWIGPTSSIFDITTFALMWY
                     VFAANNVEAQALFQSGWFIEGLLSQTLVVHMLRTQKIPFIQSRATLPVLLTTGLIMAI
                     GIYIPFSPLGAMVGLEPLPLSYFPWLVATLLSYCLVAQGMKRFYIKRFGQWF"
     gene            7845..7937
                     /gene="mgtR"
                     /locus_tag="MOX77_000591"
     CDS             7845..7937
                     /gene="mgtR"
                     /locus_tag="MOX77_000591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001082117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein MgtR"
                     /protein_id="HCA3356238.1"
                     /translation="MNRSPDKIIALIFLLISLLVLCLALWQIVF"
     gene            8138..8616
                     /locus_tag="MOX77_000592"
                     /pseudo
     CDS             8138..8616
                     /locus_tag="MOX77_000592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462661.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(8939..9619)
                     /locus_tag="MOX77_000593"
     CDS             complement(8939..9619)
                     /locus_tag="MOX77_000593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HCA3356239.1"
                     /translation="MSTPANFNGQRPAIDANDAVMLLIDHQSGLFQTVGDMPMPELRA
                     RAAALAKIATLCNMPVITTASVPQGPNGPLIPEIHANAPHAQYVARKGEINAWDNADF
                     VQAVKATGRKTLIIAGTITSVCMAFPAISAVAEGYKVFAVIDASGTYSKMAQEITMAR
                     VVQAGVVPMDTAAVASELQRTWNREDAAEWADVYTKIFPAYQLLIESYTKAQEVVKNN
                     ELLDSQRA"
     gene            10238..10351
                     /locus_tag="MOX77_000594"
     CDS             10238..10351
                     /locus_tag="MOX77_000594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_453069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356240.1"
                     /translation="MIFSPQYKTGGLTNKKTKRTFTPESAIMRKAVSTLTC"
     gene            10404..11260
                     /locus_tag="MOX77_000595"
                     /pseudo
     CDS             10404..11260
                     /locus_tag="MOX77_000595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462658.4"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
     gene            11271..11735
                     /locus_tag="MOX77_000596"
     CDS             11271..11735
                     /locus_tag="MOX77_000596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356241.1"
                     /translation="MLACLTLLFLGVGLGHLFHLYTEKNRDPEKCTAPVIVFYNNTQA
                     NLTLDFMYSLKKRTGVVSISGTYYVDNKMSGVIRRDVSYVWSENKDSTHFISTDINKV
                     TRDETLSDAVIETVLPDFYVYPGKSISYTILTQGHRGFMFTIGKRPIFFCTH"
     gene            complement(11830..14699)
                     /gene="misL"
                     /locus_tag="MOX77_000597"
                     /pseudo
     CDS             complement(11830..14699)
                     /gene="misL"
                     /locus_tag="MOX77_000597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462656.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="intestinal colonization autotransporter adhesin
                     MisL"
     gene            complement(14774..15391)
                     /locus_tag="MOX77_000598"
     CDS             complement(14774..15391)
                     /locus_tag="MOX77_000598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HCA3356242.1"
                     /translation="MMRKPSQIVHCISCDLSCQLFPDSAVRVQYCHNAAFSIWPDGNA
                     FLKKGFIEKLLLDRHNHLSSGFIFVDFSFPNLRRFTDLQWADSLANSGMHIVLISDRS
                     LTPLANYWILKSNKIQGIIYSDDDDIVQQQKMHRLFTGRLANSKRGRTLNYTEFILLK
                     HFVSGISIQQIVNIDNIDIKKLYVHKLRLENKLGHSIHKIISNIL"
     gene            complement(16121..16258)
                     /locus_tag="MOX77_000599"
     CDS             complement(16121..16258)
                     /locus_tag="MOX77_000599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001454271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356243.1"
                     /translation="MRKARLTEHQNIAVIKLVEAGRAVKDICQEADISEVTDDIYGHW
                     V"
     gene            16668..16980
                     /locus_tag="MOX77_000600"
                     /pseudo
     CDS             16668..16980
                     /locus_tag="MOX77_000600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086558297.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(17109..18137)
                     /locus_tag="MOX77_000601"
     CDS             complement(17109..18137)
                     /locus_tag="MOX77_000601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence RhuM family protein"
                     /protein_id="HCA3356244.1"
                     /translation="MEDKYLTQSPAGEFIMFASGDGKVRVECRFESNTLWLSQGMICE
                     LYGKAKATISEHIKNIFADGELEENSVVRFYRTTASDGKNYQIQYFSLPLILAVGYRV
                     RSPRGTQFRQWATQTLQEYLIKGFVMDDERLKNPPVGSSAVPDYFDEMLERIRDIRAS
                     ERRVYLRVREIFALAADYQPSLKETTQFFQTIQNKLHFACTGYTAAELIHQRADACQP
                     HMGLTSYKGEEVRKCDVTVAKNYLTQDEVSELNRVVNMWLDFAEDQARRRQQVFLRDW
                     QDKLDQFLQFNDREVLQGAGKVSKKMADEKAQAEYSQFAEQQRRLKEAEGEKDIAALL
                     QWKTEPKK"
     gene            complement(18229..19059)
                     /locus_tag="MOX77_000602"
                     /pseudo
     CDS             complement(18229..19059)
                     /locus_tag="MOX77_000602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014227719.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4942 domain-containing protein"
     gene            complement(19208..19804)
                     /locus_tag="MOX77_000603"
     CDS             complement(19208..19804)
                     /locus_tag="MOX77_000603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000173549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02646 family protein"
                     /protein_id="HCA3356245.1"
                     /translation="MTLLLNEQYHLCCYSEIRADLRGLGYHIEHVENKSQQPGRTFDY
                     QNLAASALDSENGLPQLGINTFGGHVQGKNKSVDMAQFIHCHLPDCSRYFAYLSNGHV
                     VPSIDLTEQEAEYAQYTIDHLNLNSGFLQTERRNHWEELEQLFEEHIEKDWDLHQLLQ
                     LDLVPSPDHKLHEFFSITRQFFQQEAEQVLQSHAPALI"
     gene            20366..20710
                     /locus_tag="MOX77_000604"
     CDS             20366..20710
                     /locus_tag="MOX77_000604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356246.1"
                     /translation="MSYKYVGKHGCDVALRMGYKEYPDENAYGDAYYIKDGLKWIFNI
                     TGLKKRLGVYSDDDLRKQNYDVDTYYRVENQQEESADDEMQSLYHNLAVEEGEPVYLE
                     GGMYLYPDGSIR"
     gene            complement(21028..21122)
                     /locus_tag="MOX77_000605"
     tRNA            complement(21028..21122)
                     /locus_tag="MOX77_000605"
                     /product="tRNA-Sec"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(21086..21088),aa:Sec,seq:tca)
     gene            21410..22792
                     /locus_tag="MOX77_000606"
     CDS             21410..22792
                     /locus_tag="MOX77_000606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside-pentoside-hexuronide family
                     transporter"
                     /protein_id="HCA3356247.1"
                     /translation="MKSEILSVKEKIGYGMGDAASHIIFDNVMLYMMFFYTDIFGIPA
                     GFVGTMFLLARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPD
                     LSLNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGM
                     LSTVLMMPLVKLIGGENKALGFQGGIAALSVVAFLMLAFCFFTTKERVEAPATHTSMR
                     EDLRDIWHNDQWRIVGLLTILNILAVCVRGGAMMYYVTWILGKPGVFVAFLTTYCVGN
                     LIGSALAKPLTDWKCKVSVFWWTNALLAVISVAMFFVPMHATIAMFVFIFVIGVLHQL
                     VTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLALGGALIGWMLAGGGYDA
                     AAKTQNSATISIIIALFTIVPAICYLLSAAIAKRYYTLKSPFLKTILEQLAQGAHRNE
                     QEFTHKELQN"
     gene            22804..25122
                     /gene="yicI"
                     /locus_tag="MOX77_000607"
     CDS             22804..25122
                     /gene="yicI"
                     /locus_tag="MOX77_000607"
                     /EC_number="3.2.1.177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-xylosidase"
                     /protein_id="HCA3356248.1"
                     /translation="MKISDGNWLIQPGLNLIHPVQVFDVEQHGNEMVVYAAPRDVRER
                     TWQLDTPLFTLRFFSPQEGVIGVRMEHFQGALDNGPHYPLNVLQDINVEMQNNAEFAE
                     LKSGSLSVRVTKGELWSLDFLRNGVRITGSQLKNNGYVQDTNSGRNYMFERLDLGVGE
                     TVYGLGERFTALVRNGQTVETWNRDGGTSTEQSYKNIPFYITNRGYGVLVNHPQCVSF
                     EIGSEKVSKVQFSVESEYLEYFVIDGPTPKDVLNRYTQFTGRPALPPAWSFGLWLTTS
                     FTTNYDEATVNRFIDGMAERNLPLHVFHFDCFWMKAFQWCDFEWDPVTFPDPKGMIHR
                     LKAKGLKVCVWINPYIGQKSPVFQELKEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNP
                     QACEWYADKLKGLVEMGVDCFKTDFGERIPTDVQWFDGSDPQKMHNHYAYIYNELVWN
                     VLKETVGVEEAVLFARSASVGAQQFPVHWGGDCYANYESMAESLRGGLSIGLSGFGFW
                     SHDIGGFENTAPAHVYKRWCAFGLLSSHSRLHGSKSYRVPWAYDDESCDVVRFFTEQK
                     CRMMPYLYREAARANEAGTPMMRAMMLEFPDDPACDYLDRQYMLGDAVMVAPVFSEAG
                     DVEFYLPEGRWTHLWRNDEVQGSRWHKQQHDFLSLPVYVRDNTLLALGNNSQKPDYAW
                     HEGTAFQLFHLDDGCEAVCEVPATDGSTIFTLQAKRTGNTITVSGEGEARNWTLCLRN
                     ITQISGTKCGSYAGSELGVVVTPQGNEVVITL"
     gene            complement(25225..26934)
                     /locus_tag="MOX77_000608"
     CDS             complement(25225..26934)
                     /locus_tag="MOX77_000608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HCA3356249.1"
                     /translation="MKLIGRLLLYVLIACLVVIFGFYFLLQTRWGADHVSNWVSENSG
                     YHLTFDVMDHRFSAPSHLLLENVTFGRDGQPATLVAKTVDIGLSIRQLTAPLHVDTIL
                     LQDGTLNISVQTAPFPFEADRLQLRNMALNSPGSEWRLSAQRVNGGVMPWRPEAGRVL
                     GNKAQIQLSAGSLTLNDVPATNVLIEGSIDHDQMMLNTVGADMARGALTGVARRNADG
                     SWVVENLRLNDIRLQSDKSLSEFFAPLTTVPSLQIGRLEVTDSSLQGPDWAVTDLDLS
                     LRNLTLRKEDWQSQEGKLSMNASEFIYGSLHLLDPILNAEFSPQGVALRQFTTRWEGG
                     MVRTSGAWLRESKALILDDTAIAGLEYTLPENWKQLWMKPLPDWLNSLTLKKFSASRN
                     LVIDIDPTFPWQITALDGYGANLELVQHHQWGVWSGNATLNAAAATFNRVDVRRPSLS
                     LTANASTVNISDLSAFTEKGILEATASVSQQPQRQTQISLNGRGVPMDVLQQWGWPAL
                     PIAGDGNIQFTASGNIQADAPLKPTVNGQLHAVNAQKQQIMQTMQAGVVSGGEVTSTE
                     PAL"
     gene            complement(27055..28446)
                     /gene="xanP"
                     /locus_tag="MOX77_000609"
     CDS             complement(27055..28446)
                     /gene="xanP"
                     /locus_tag="MOX77_000609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine/proton symporter XanP"
                     /protein_id="HCA3356250.1"
                     /translation="MSVNAIEPADAQPVAQTQNSELIYRLEDRPPLPQTLFAACQHLL
                     AMFVAVITPALLICQALGLPAQDTQHIISMSLFASGVASIIQIKAWGPVGSGLLSIQG
                     TSFNFVAPLIMGGTALKTGGADVPTMMAALFGTLMLASCTEMVLSRILHLARRIITPL
                     VSGVVVMIIGLSLIQVGLTSIGGGYAAMSDNTFGAPKNLLLAGVVLAIIILLNRQRNP
                     YLRVASLVIAMAAGYLLAWFMGMLPENNAPVSQDILMVPTPLYYGLGIDWNLLLPLML
                     VFMITSLETIGDITATSDVSEQPVSGPLYMKRLKGGVLANGLNSFVSAVFNTFPNSCF
                     GQNNGVIQLTGVASRYVGFVVALMLIVLGLFPAVSGFVQHIPEPVLGGATLVMFGTIA
                     ASGVRIVSREPLNRRAILIIALSLAVGLGVSQQPQILQFAPEWVKNLLSSGIAAGGIT
                     AIVLNLILPPEKP"
     gene            28673..29878
                     /gene="gltS"
                     /locus_tag="MOX77_000610"
     CDS             28673..29878
                     /gene="gltS"
                     /locus_tag="MOX77_000610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016507315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/glutamate symporter"
                     /protein_id="HCA3356251.1"
                     /translation="MFELDTLSTLVAATLVLLLGRKLVQSVSLLKKYTIPEPVAGGLL
                     VAVALLVLKKSVGWEVNFDMTLRDPLMLAFFATIGLNANLASLRKGGRVVGVFLVVVV
                     GLLLMQNAIGIGMASLLGLDPLMGLIAGSITLSGGHGTGAAWSKLFVERYGFASATEV
                     AMACATFGLVLGGLIGGPVARYLVKHSTTPDGMPDDQAVPTAFEKPDVGRMITSLVLI
                     ETIALIAICLTVGKIVAQLLAGTVLELPVFVCVLFVGVILSNGLALVGFYRVFERAVS
                     VLGNVSLSLFLAMALMSLKLWELASLALPMLAILVVQTIFMALYAIFVTWRMMGKNYD
                     AAVLAAGHCGFGLGATPTAIANMQAITDRFGPSHMAFLVVPMVGAFFIDIVNALVIKL
                     YLMLPIFAQ"
     gene            complement(29914..31995)
                     /gene="recG"
                     /locus_tag="MOX77_000611"
     CDS             complement(29914..31995)
                     /gene="recG"
                     /locus_tag="MOX77_000611"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HCA3356252.1"
                     /translation="MSGRLLDAVPLNSLTGVGAAQSSKLAKIGLHTVQDLLLHLPLRY
                     EDRTHLYPIGELLPGIYATVEGEVLNCNITFGGRRMMTCQISDGSGILTMRFFNFNAA
                     MKNSLATGRRVLAYGEAKRGKYGAEMIHPEYRLQGDLSTPELQETLTPVYPTTEGVKQ
                     ATLRKLTDQALELLDTCAIAELLPPELAQGMMSLPEALRTLHRPPPTLQLADLETGKH
                     PAQRRLILEELLAHNLSMLALRAGAQRYHTQPLSTNNILKDKLLASLPFKPTSAQARV
                     VAEIERDMALDVPMMRLVQGDVGSGKTLVAALAALRAIAHGKQVALMAPTELLAEQHA
                     NNFRNWFEPLGVEVGWLAGKQKGKARQAQQEAIASGQVQMIVGTHAIFQEQVQFNGLA
                     LVIIDEQHRFGVHQRLALWEKGQQQGFHPHQLIMTATPIPRTLAMTAYADLDTSVIDE
                     LPPGRTPVTTVAIPDTRRHEIIDRVRNACTTEGRQAYWVCTLIEESDLLEAQAAEATW
                     EELKLALPELNIGLVHGRMKPAEKQAVMQAFKQGELHLLVATTVIEVGVDVPNASLMI
                     IENPERLGLAQLHQLRGRVGRGAVASHCVLLYKSPLSKTAQKRLQVLRDSNDGFVIAQ
                     KDLEIRGPGELLGTRQTGNAEFKVADLLRDQAMIPEVQRIARHIHERYPQQAQALIER
                     WMPETERYSNA"
     gene            complement(32001..32690)
                     /gene="trmH"
                     /locus_tag="MOX77_000612"
     CDS             complement(32001..32690)
                     /gene="trmH"
                     /locus_tag="MOX77_000612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(18)-2'-O)-methyltransferase
                     TrmH"
                     /protein_id="HCA3356253.1"
                     /translation="MNPKRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVG
                     VHEVHAIWPGSRMRTMASAAAGSNSWVQVKTHRTIDDAVAHLKGRGMQILATHLSDKA
                     VDFREIDYTRPTCILMGQEKTGITQEALDLADRDIIIPMIGMVQSLNVSVASALILYE
                     AQRQRQNAGMYLRENSMLPEDEQQRLLFEGGYPVLAKVAKRKGLPYPRVNQQGEIDAD
                     ADWWATMQAAG"
     gene            complement(32695..34806)
                     /gene="spoT"
                     /locus_tag="MOX77_000613"
     CDS             complement(32695..34806)
                     /gene="spoT"
                     /locus_tag="MOX77_000613"
                     /EC_number="3.1.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional GTP
                     diphosphokinase/guanosine-3',5'-bis pyrophosphate
                     3'-pyrophosphohydrolase"
                     /protein_id="HCA3356254.1"
                     /translation="MYLFESLNQLIQTYLPEDQIKRLRQAYLVARDAHEGQTRSSGEP
                     YITHPVAVACILAEMKLDYETLMAALLHDVIEDTPATYQDMEQLFGKSVAELVEGVSK
                     LDKLKFRDKKEAQAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSLRPDKRRRIAR
                     ETLEIYSPLAHRLGIHHIKTELEELGFEALYPNRYRVIKEVVRAARGNRKEMIQKILS
                     EIEGRLQEAGIPCRVSGREKHLYSIYCKMVLKEQRFHSIMDIYAFRVIVHDSDTCYRV
                     LGQMHSLYKPRPGRVKDYIAIPKANGYQSLHTSMIGPHGVPVEVQIRTEDMDQMAEMG
                     VAAHWAYKEHGETSTTAQIRAQRWMQSLLELQQSAGSSFEFIESVKSDLFPDEIYVFT
                     PEGRIVELPAGATPVDFAYAVHTDIGHACVGARVDRQPYPLSQPLSSGQTVEIITAPG
                     ARPNAAWLNFVVSSKARAKIRQLLKNLKRDDSVSLGRRLLNHALGGSRKLAEIPQENI
                     QRELDRMKLATLDDLLAEIGLGNAMSVVVAKNLQQGEAVVPTVAQSNHGHLPIKGADG
                     VLITFAKCCRPIPGDPIIAHVSPGKGLVIHHESCRNIRGYQKEPEKFMAVEWDKETEQ
                     EFITEIKVEMFNHQGALANLTAAINTTTSNIQSLNTEEKDGRVYSTFIRLTARDRVHL
                     ANIMRKIRVMPDVIKVTRNRN"
     gene            complement(34825..35100)
                     /gene="rpoZ"
                     /locus_tag="MOX77_000614"
     CDS             complement(34825..35100)
                     /gene="rpoZ"
                     /locus_tag="MOX77_000614"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013511051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HCA3356255.1"
                     /translation="MARVTVQDAVEKIGNRFDLVLVAARRARQMQVGGKDPLVPEEND
                     KTTVIALREIEEGLINNQILDVRERQEQQEQEAAELQAVTAIAEGRR"
     gene            complement(35155..35778)
                     /gene="gmk"
                     /locus_tag="MOX77_000615"
     CDS             complement(35155..35778)
                     /gene="gmk"
                     /locus_tag="MOX77_000615"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000046969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HCA3356256.1"
                     /translation="MAQGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRAP
                     RPGEVHGEHYFFVNHDEFKTMIGREAFLEHAEVFGNYYGTSRETIEQVLATGVDVFLD
                     IDWQGAQQIREKMPQARSIFILPPSKIELDRRLRGRGQDSEEVIAKRMAQAVAEMSHY
                     AEYDYLIVNDDFDTALSDLKTIIRAERLRMSRQKQRHDALISKLLAD"
     gene            36035..37719
                     /gene="ligB"
                     /locus_tag="MOX77_000616"
                     /pseudo
     CDS             36035..37719
                     /gene="ligB"
                     /locus_tag="MOX77_000616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462639.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigB"
     gene            complement(37716..38333)
                     /locus_tag="MOX77_000617"
     CDS             complement(37716..38333)
                     /locus_tag="MOX77_000617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric intracellular cation channel family
                     protein"
                     /protein_id="HCA3356257.1"
                     /translation="MLLHVLYLIGITAEAMTGALAAGRRRMDTFGVIIIATATAIGGG
                     SVRDILLGHYPLGWVKHPEYVIIVATAAVLTTIVAPVMPYLRKLFLVLDALGLVVFSI
                     IGAQIALDMGEGPIIAVVAAATTGVFGGVLRDMFCKRIPLVFQKELYAGISFASAVLY
                     IALQHYVMNPDVVVISTLLFGFTARLLALRLKLGLPVFYYRHEGH"
     gene            complement(38581..39465)
                     /locus_tag="MOX77_000618"
     CDS             complement(38581..39465)
                     /locus_tag="MOX77_000618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001083230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HARLDQ motif MBL-fold protein"
                     /protein_id="HCA3356258.1"
                     /translation="MNRYVLFFVCIFSTSALPAMAALDPSQPLSPAPPLSLFKAWAKP
                     MKPFQITEGVWYVGTENLSSILLTTPAGHILIDAGLDESAPQIKANIEAAGFRFTDVR
                     YLLSSHARLDQAGGMARLKAWSGAQLVASQPNADQMARGGRQDFALGDALPFPLVTTD
                     KIIHNQESISLGGVTVTALFTPGHLPGSTSWRVTLRNGKTLIYADSLATPDYLLINNK
                     NYPDLVTDIQSSFKTLAAQHVDIFIANKGDRFGLLEKRQQLRNGDTQAFFDSNGLQQY
                     VERSRQRFITQLTAQQPQ"
     gene            39539..40441
                     /locus_tag="MOX77_000619"
     CDS             39539..40441
                     /locus_tag="MOX77_000619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCA3356259.1"
                     /translation="MNLLQMDMNLLKVLYVLLETSSTGKTAQKLALSPSAVSHALMRL
                     RDALNDPLFRREGNRQIATPYAQALRDKLAPVFVSLNEELFGDKENGSRCFRVVLPPA
                     LNALLTPVLAEKGHLHQAVIECLPFARRPWRDELLDSSVDLVLAIGDHQKQVSALHYE
                     RVGTTRLIAVYGAPLRSRLENAAALNFADLQHYQHIYCLPWTKENNELDRQQARAGFE
                     RPLAFVCHDYSQLAPAVQSAPLMAIVPRPWYENLSDKRGLFVLPLAGEQAEGAIFMQY
                     RASTVEWKRRLIDAIRRKLKTYYR"
     gene            complement(40491..41354)
                     /locus_tag="MOX77_000620"
     CDS             complement(40491..41354)
                     /locus_tag="MOX77_000620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005122606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YicC family protein"
                     /protein_id="HCA3356260.1"
                     /translation="MIRSMTAYARREIKGEWGSATWEMRSVNQRYLETYFRLPEQFRS
                     LEPVVRERIRTRLTRGKVECMLRFEPDASAQGELILNEKLAKQLVSAANWVKMQSDEG
                     EINPVDILRWPGVMAAQEQDLDAIAAEILAALDGTLDDFIVARETEGQALKALIEQRL
                     EGVSAEVAKVRAHMPEILQWQRERLVAKLEDAQVQLENNRLEQELVMMAQRIDVAEEL
                     DRLEAHVKETYNILKKKEAVGRRLDFMMQEFNRESNTLASKSINADVTNSAIELKVLI
                     EQMREQIQNIE"
     gene            41480..42196
                     /gene="rph"
                     /locus_tag="MOX77_000621"
     CDS             41480..42196
                     /gene="rph"
                     /locus_tag="MOX77_000621"
                     /EC_number="2.7.7.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006803115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HCA3356261.1"
                     /translation="MRPAGRSANQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIE
                     EGVPRFLKGQGQGWITAEYGMLPRATHTRNAREAAKGKQGGRTMEIQRLIARALRAAV
                     DLKTLGEFTITLDCDVIQADGGTRTASITGACVALADALNKLVANGKLKTNPMKGMVA
                     AVSVGIVNGEAICDLEYVEDSAAETDMNVVMTEDGRIIEVQGTAEGEPFSHEELLTLL
                     ALARGGIESIVATQKAALEN"
     gene            42275..42916
                     /gene="pyrE"
                     /locus_tag="MOX77_000622"
     CDS             42275..42916
                     /gene="pyrE"
                     /locus_tag="MOX77_000622"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HCA3356262.1"
                     /translation="MKPYQRQFIEFALNKQVLKFGEFTLKSGRKSPYFFNAGLFNTGR
                     DLALLGRFYAEALVDSGIEFDLLFGPAYKGIPIATTTAVALAEHHDKDLPYCFNRKEA
                     KDHGEGGSLVGSALQGRVMLVDDVITAGTAIRESMEIIQAHRATLAGVLISLDRQERG
                     RGEISAIQEVERDYGCKVISIITLKDLIAYLEEKPDMAEHLAAVRAYREEFGV"
     gene            complement(42994..43590)
                     /gene="slmA"
                     /locus_tag="MOX77_000623"
     CDS             complement(42994..43590)
                     /gene="slmA"
                     /locus_tag="MOX77_000623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000818604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoid occlusion factor SlmA"
                     /protein_id="HCA3356263.1"
                     /translation="MAEKQTAKRNRREEILQSLALMLESSDGSQRITTAKLAASVGVS
                     EAALYRHFPSKTRMFDSLIEFIEDSLITRINLILKDEKDTSTRLRLIVLLILGFGERN
                     PGLTRILTGHALMFEQDRLQGRINQLFERIEAQLRQVLREKRMREGEGYTTDKNLLAS
                     QLLAFCEGMLSRFVRSEFKYRPTDDFDARWPLIAAQLQ"
     gene            complement(43698..44156)
                     /gene="dut"
                     /locus_tag="MOX77_000624"
     CDS             complement(43698..44156)
                     /gene="dut"
                     /locus_tag="MOX77_000624"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000976070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HCA3356264.1"
                     /translation="MMKKIDVKILDPRVGQQFPLPTYATSGSAGLDLRACLDDAVELA
                     PGATTLVPTGLAIHIADPSLAAVMLPRSGLGHKHGIVLGNLVGLIDSDYQGQLMVSIW
                     NRGQDSFTIEPGERIAQMVFVPVVQAEFNLVEAFDATERGEGGFGHSGRK"
     gene            complement(44134..45354)
                     /gene="coaBC"
                     /locus_tag="MOX77_000625"
     CDS             complement(44134..45354)
                     /gene="coaBC"
                     /locus_tag="MOX77_000625"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418096.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HCA3356265.1"
                     /translation="MSLAGKKIVLGVSGGIAAYKTPELVRRLRERGADVRVAMTEAAK
                     AFITPLSLQAVSGYPVSDSLLDPAAEAAMGHIELGKWADLVILAPATADLIARVASGM
                     ANDLVSTICLATPAPVAVLPAMNQQMYRAAATQHNLEVLASRGLFIWGPDSGSQACGD
                     VGPGRMLDPLAIVDKAAAHFAAVNDLRHLNIMITAGPTREPLDPVRYISNYSSGKMGF
                     AIAAAAARRGANVTLVSGPVSLPMPPFVKRVDVITALDMEAAVQAAVQQQHIFISCAA
                     VADYRAETIASEKIKKQAAQSDELIIKMVKNPDIVAGVAALSDNRPYVVGFAAETNNV
                     EEYARQKRTRKNLDLICANDVSLSNQGFNSDKNALHLFWQDGDKVLPLERKELLGQLL
                     LDEIVTRYDEKNRR"
     gene            45530..46195
                     /gene="radC"
                     /locus_tag="MOX77_000626"
     CDS             45530..46195
                     /gene="radC"
                     /locus_tag="MOX77_000626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HCA3356266.1"
                     /translation="MDTLDELLPREKMLRSGIASLSDVELLALFLRTGTPGKDVMTLA
                     KEILQHFGSLYGLLSADFAQFRGVNGIGLAKFAQLKGIAELARRYYSVRMNEESALLS
                     PEMTREFLQSQLTGEEREIFLVIFLDAQHRVLQHSRLFSGTLNHVEVHPREIVREAIK
                     LNASAVILAHNHPSGCAEPSKADKLITERVIKCCQFMDIRVLDHLIIGRGEYVSFAER
                     GWI"
     gene            46413..46649
                     /gene="rpmB"
                     /locus_tag="MOX77_000627"
     CDS             46413..46649
                     /gene="rpmB"
                     /locus_tag="MOX77_000627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008457442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HCA3356267.1"
                     /translation="MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEK
                     RFVTLRVSAKGMRIIDKKGIETVLSELRARGEKY"
     gene            46670..46837
                     /gene="rpmG"
                     /locus_tag="MOX77_000628"
     CDS             46670..46837
                     /gene="rpmG"
                     /locus_tag="MOX77_000628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010847629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HCA3356268.1"
                     /translation="MAKGIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVR
                     QHVIYKEAKIK"
     gene            46935..47744
                     /gene="mutM"
                     /locus_tag="MOX77_000629"
     CDS             46935..47744
                     /gene="mutM"
                     /locus_tag="MOX77_000629"
                     /EC_number="3.2.2.23"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-formamidopyrimidine
                     glycosylase/DNA-(apurinic or apyrimidinic site) lyase"
                     /protein_id="HCA3356269.1"
                     /translation="MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIYRL
                     SDTPVLSVQRRAKYLLLELPDGWIIIHLGMSGSLRILSEALPAEKHDHVDLVMSNGKI
                     LRYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMD
                     NKLVVGVGNIYASESLFAAGIHPDRLASSLSTEECDLLARVIKAVLLRSIEQGGTTLK
                     DFLQSDGKPGYFAQELQVYGRKGEPCRVCGTPIVATKHAQRATFYCRHCQK"
     gene            complement(47772..48251)
                     /gene="coaD"
                     /locus_tag="MOX77_000630"
     CDS             complement(47772..48251)
                     /gene="coaD"
                     /locus_tag="MOX77_000630"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HCA3356270.1"
                     /translation="MQKRAIYPGTFDPITNGHLDIVTRATQMFDHVILAIAASPGKKP
                     MFTLNERVALAQKATAHLGNVEVVGFSDLMANFARDRQANILIRGLRAVADFEYEMQL
                     AHMNRHLMPQLESVFLMPSKEWSFISSSLVKEVARHQGDVTHFLPDNVHQALMDKLK"
     gene            complement(48260..49537)
                     /gene="waaA"
                     /locus_tag="MOX77_000631"
     CDS             complement(48260..49537)
                     /gene="waaA"
                     /locus_tag="MOX77_000631"
                     /EC_number="2.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid IV(A) 3-deoxy-D-manno-octulosonic acid
                     transferase"
                     /protein_id="HCA3356271.1"
                     /translation="MLELLYTALLYLIQPLIWIRLWVRGRKAPAYRKRWGERYGFYRR
                     PLKPGGIMLHSVSVGETLAAIPLVRALRHRYPDLPITVTTMTPTGSERVQSAFGNDVQ
                     HVYLPYDLPDALNRFLNKIDPKLVLIMETELWPNLIAALHKRHIPLVIANARLSARSA
                     AGYAKLGKFVRTLLRRITLIAAQNEEDGERFVALGAKNNQVTVTGSLKFDISVTPQLA
                     AKAVTLRSQWAPHRPVWIATSTHDGEESIVIAAHQALLHQFPNLLLILVPRHPERFPD
                     AINLVRQAGLSYITRSSGEVPSASTQVVVGDTMGELMLLYGIADLAFVGGSLVERGGH
                     NPLEAAAHAIPVLMGPHTFNFKDICARLEQASGLITITDAATLAKEVSSLLTDADYRN
                     FYGRHAVEVLYQNQGALQRLLQLLEPYLPPKTH"
     gene            49946..51016
                     /gene="rfaQ"
                     /locus_tag="MOX77_000632"
     CDS             49946..51016
                     /gene="rfaQ"
                     /locus_tag="MOX77_000632"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001521713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide core heptosyltransferase
                     RfaQ"
                     /protein_id="HCA3356272.1"
                     /translation="MEKPFRRILIIKMRFHGDMLLTTPVISTLKQNYPDAKIDVLLYQ
                     NTIPILSENPEINALYGISNKGAGTKEKIKNALSLIKKLRANSYDLVVNLTDQWSVAL
                     IVRFLNAKIKISQDFGNRQSALWKKSFTHLVPYAGEHAVERTLSALKPLALKQYVTET
                     TMSYRPEHWENMRQQLKQLGVTRQYVVIQPTARQLFKCWDNDKFSQVIDAVQRRGYQV
                     VLTSGPAADEMACVDAIACGCETKPVTGLAGKTRFPELGALIDHADLFIGVDSAPGHI
                     AAAVKTPVICLFGATDHVFWRPWTDDIIQFWAGNYQPMPERHELDRNKKYLSVIPAED
                     VIAATEKMLPHEARPIDLDSLL"
     gene            51013..52137
                     /locus_tag="MOX77_000633"
     CDS             51013..52137
                     /locus_tag="MOX77_000633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HCA3356273.1"
                     /translation="MRVAFCLYKYFPFGGLQRDFMHIAQTVAARGHQVRVYTQSWEGE
                     CPDNFELIRVPVKSRTNHGRNAEYYAWVQHHLRDHPVDRVVGFNKMPGLDVYYAADVC
                     YAEKVAQEKGFFYRLTSRYRHYAAFERATFEHGKQTQLLMLTNKQIADFQKHYQTEAE
                     RFHILPPGIYPDRKYSQQIPNSRQIYRQKNGISEQQKLLLQVGSDFTRKGVDRSIEAL
                     ASLPESLRQNTVLCVVGQDKPKKFAALAERSGVGTNVHFFSGRNDIAELMAAADLLLH
                     PAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIVDANCGEAMTEPFRQDALNEVLLRA
                     LTQPSLRSAWAENARYYADTQDLYSLPEKAADIITGDLDG"
     gene            52130..52927
                     /gene="rfaP"
                     /locus_tag="MOX77_000634"
     CDS             52130..52927
                     /gene="rfaP"
                     /locus_tag="MOX77_000634"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide core heptose(I) kinase RfaP"
                     /protein_id="HCA3356274.1"
                     /translation="MVELKAPLTTLWRGKDAFEEVKTLQGEVFRELEMRRTLRFELDG
                     KSYFLKWHKGTSLKEIVKNLISLRMPVLGADREWHAIHRLHELGVDTMHGVGFGEKGV
                     NPLTRTSFIITEDLTPTISLEDYCVDWAVNPPDAQVKWMIIKRVATMVRKMHAGGINH
                     RDCYICHFLLHLPFTGREEDLKISVIDLHRAQIRQHVPLRWRDKDLIGLYFSSMNIGL
                     TQRDIFRFMREYFSLPLREILQKDSGLIHQADVKAARIKERTIRKNL"
     gene            52968..53351
                     /locus_tag="MOX77_000635"
     CDS             52968..53351
                     /locus_tag="MOX77_000635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010989266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356275.1"
                     /translation="MKVLIINDTGNSYHWGCYGTSTAIKESLRFRGINEIVTFSCEEG
                     SKIENSPKKILLVYSKNKLIRRLASHYYSKHLRRKLPDLWDSLLKSDCVIINGEGTIN
                     SIHTATRFIFFIIHVAKDILKKRFI"
     gene            53351..54043
                     /locus_tag="MOX77_000636"
     CDS             53351..54043
                     /locus_tag="MOX77_000636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001772497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide pyruvyl transferase family
                     protein"
                     /protein_id="HCA3356276.1"
                     /translation="MNHSCYPKLGNEKQIYYYKCAYSRCNYVAAREKKSHELITNILG
                     IDATLSFDSLPLLVKKVESEIPESLYKEKYVCLSGAVNYNKENSSFIAGEILKKYKNH
                     KLVYLVGSPSGMNNEEPDVIESLKKFMPELIIHDAKSFTEWLSVIKNSVVLISGRYHY
                     SIAAMCFGTPTVCFSSNTPKLDEINKMFNLPGCVRTHDEFTKALNEIDNLTWQPLSKE
                     MSDLAEYNYNFL"
     gene            54103..55182
                     /gene="waaB"
                     /locus_tag="MOX77_000637"
                     /gene_synonym="rfaB"
     CDS             54103..55182
                     /gene="waaB"
                     /locus_tag="MOX77_000637"
                     /gene_synonym="rfaB"
                     /EC_number="2.4.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide 1,6-galactosyltransferase"
                     /protein_id="HCA3356277.1"
                     /translation="MKITFVGEAVSGFGGMETVISNVIHTFENSSPKINCEMFFFCRN
                     DKMDKAWLKEIKYAQSFSNIKLSFLRRSKHVYNFSQWLKETSPDIVICIDVISCLYAN
                     KARKKSGKQFTIFSWPHFSLDHKKHAECITYADYHLAISSGIKEQMMARGISEQDISV
                     VYNPVSIKTIIVPPPERDKPAVFLYVGRLKFEGQKRVKDLFDGLARTTGEWQLHIIGD
                     GSDFEKCQAYSRELGIEQRVIWYGWQSAPWQVVQQKIKNVTALLLTSAFEGFPMTLLE
                     AMSYGIPCISSDCMSGPRDMIKPGLNGELYTPGAIDDFVGHLNRVISGEVKYQHDIIP
                     GTIERFYDVLYFKNFNNAIFSKLQK"
     gene            55188..56201
                     /gene="waaO"
                     /locus_tag="MOX77_000638"
                     /gene_synonym="rfaI"
     CDS             55188..56201
                     /gene="waaO"
                     /locus_tag="MOX77_000638"
                     /gene_synonym="rfaI"
                     /EC_number="2.4.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide
                     3-alpha-galactosyltransferase"
                     /protein_id="HCA3356278.1"
                     /translation="MSRKYFEEEVIQQTLDYNYAQHSDANKFNIAYGIDKNFLFGCGV
                     SIASVLIANREKALAFHVFTDFFGPEDQQRFDALAKQYATQIVVYLIDCERLKSLPST
                     KNWTYATYFRFIIADYFSDKTDRVLYLDADIACKGSIQELIDLNFAENEIAAVVAEGE
                     LEWWTKRSVSLATPGLVSGYFNAGFILINIPLWTAENISKKAIEMLKDPEVVQRITHL
                     DQDVLNILLVNKARFVDKKFNTQFSLNYELKDSVINPVDAETVFVHYIGPTKPWHSWG
                     AYPVSQYFLRAKSNSPWSHCALLNPVTSHQLRYAAKHMFNQKHYTSGINYYIAYFKRK
                     LLE"
     gene            56219..57229
                     /gene="rfaJ"
                     /locus_tag="MOX77_000639"
     CDS             56219..57229
                     /gene="rfaJ"
                     /locus_tag="MOX77_000639"
                     /EC_number="2.4.1.58"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide 1,2-glucosyltransferase RfaJ"
                     /protein_id="HCA3356279.1"
                     /translation="MDSFPEIEIAEYKVFDESNNNDDNVLNISYGVDENYLDGVGVSI
                     ASVVLNNNIPLAFHIICDSYSPCFVKYIERLAVQHHIKISLYLIKVESLEVLPQTKVW
                     SRAMYFRLFAFDYLSKKVNTLLYLDADVVCKGSLQDLLQLDLTEKIAAVVKDVDSIQN
                     KVNERLSAFNLQGGYFNSGVVFVNLKLWKENALTEKAFLLLAGKEADSFKYPDQDVLN
                     ILLQDKVIFLPRPYNTIYTIKSELKDRSHKKYSNIINDNTILIHYTGATKPWHAWANY
                     PSVIYYKNARLNSPWKDSPAKDARTIVEFKKRYKHLLVQGHYFKGLLAGSAYLYRKLF
                     HK"
     gene            57252..57950
                     /gene="rfaY"
                     /locus_tag="MOX77_000640"
     CDS             57252..57950
                     /gene="rfaY"
                     /locus_tag="MOX77_000640"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide core heptose(II) kinase RfaY"
                     /protein_id="HCA3356280.1"
                     /translation="MIIEKKVKNYTVFVKKDGEKYIEIFKDFLSYNHQVIKVFRNIED
                     TKVVLINTDYGKYILKVFSPKVKSTERFFKSLVKGDYYEKLFHQTDRVRREGFAALND
                     FYLLAEIKTLRYVKTYVMIIEYIEGIELVDMPEISDEVRGKIKQSIYSLHQHGMVSGD
                     PHKGNFILQGNEIRIIDLSGKRPSRQRKAKDRIDLERHYGIKNNVRDIGFYLLIYKKK
                     LRNFLRRIKGKEKR"
     gene            58100..58909
                     /gene="waaZ"
                     /locus_tag="MOX77_000641"
     CDS             58100..58909
                     /gene="waaZ"
                     /locus_tag="MOX77_000641"
                     /EC_number="2.4.99.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-D-manno-oct-2-ulosonate III transferase
                     WaaZ"
                     /protein_id="HCA3356281.1"
                     /translation="MGSVNFITHADVLQLIAKRTAEDCIIFLSGPTSRKTPLSLLRMK
                     DVIAVNGSVQYLLNNNVKPFLYLLTDVRFLHRRREDFYNFSRNSQFTIVNLDVYEQAS
                     VDDQKYIEENCLIIRSFYRREKGGFLKKIKFNILKRVHKALLISVPLSKRGRLAGFCK
                     DISIGYCSYHTIAYTAIQVAYSLKYGRIICSGLDLTGSCPRFYDESTSPMPSELSKDL
                     FKILPFFTFMRKNVSDLNIFNLSDDTAIHYDIIPYITASELEDEIYYDKIV"
     gene            59008..60153
                     /locus_tag="MOX77_000642"
     CDS             59008..60153
                     /locus_tag="MOX77_000642"
                     /EC_number="2.4.1.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide
                     N-acetylglucosaminyltransferase"
                     /protein_id="HCA3356282.1"
                     /translation="MIKKIIFTVTPIFSIPPRGAAAVETWIYQVAKRLSIPNAIACIK
                     NAGYPEYNKINDNCDIHYIGFSKVYKRLFQKWARLDPLPYSQRILNIRDKVTTQEDSV
                     IVIHNSMKLYRQIRERNPNAKLVMHMHNAFEPELPDTDAKIIVPSQFLKAFYEERLPA
                     AAVSIVPNGFCAETYKRNPQDNLRQQLNIAEDATVLLYAGRISPDKGILLLLQAFKQL
                     RTLRSNIKLVVVGDPYASRKGEKAEYQKKVLDAAKEIGTDCIMAGGQSPDQMHNFYHI
                     ADLVIVPSQVEEAFCMVAVEAMAAGKAVLASKKGGISEFVLDGITGYHLAEPMSSDSI
                     INDINRALADKERHQIAEKAKSLVFSKYSWENVAQRFEEQMKSWFDK"
     gene            complement(60210..61424)
                     /gene="rfaL"
                     /locus_tag="MOX77_000643"
     CDS             complement(60210..61424)
                     /gene="rfaL"
                     /locus_tag="MOX77_000643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase RfaL"
                     /protein_id="HCA3356283.1"
                     /translation="MLTTSLTLNKEKWKPIWNKALVFLFVATYFLDGITRYKHLIIIL
                     MVITAIYQVSRSPKSFPPLFKNSVFYSAAVLSLILVYSILISPDMKESFKEFENTVLE
                     GFLLYTLLIPVLLKDETKETIAKIVLFSFLTSLGLRCLAESILYIEDYNKGIMPFISY
                     AHRHMSDSMVFLFPALLNIWLFRKNSIKLVFLVLSAIYLFFILGTLSRGGWLAVLIVG
                     VLWAILNRQWKLIGVGAILLAIIGALVITQHTNKPDPEHLLYKLQQTDSSYRYTNGTQ
                     GTAWILIQENPIKGYGYGNDVYDSVYNKRVVDYPTWTFKESIGPHNTILYIWFSAGIL
                     GLASLAYLYGAIIRETASSTFRKVEISPYNAHLLLFLSFVGFYIVRGNFEQVDIAQIG
                     IITGFLLALRNR"
     gene            complement(61464..62417)
                     /gene="rfaC"
                     /locus_tag="MOX77_000644"
     CDS             complement(61464..62417)
                     /gene="rfaC"
                     /locus_tag="MOX77_000644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase RfaC"
                     /protein_id="HCA3356284.1"
                     /translation="MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIQFDWVVEEGFAQI
                     PSWHSAVDRVIPVAIRRWRKAWFSAPIKAERIAFHRAVCAYQYDAVIDAQGLVKSAAL
                     VTRLAHGIKHGMDWSTAREPLASLFYNRKHHIAKQQHAVERTRELFAKSLGYDKPQSQ
                     GDYAIAKHFLHCQQAVSDPYAVFLHATTRDDKHWPEANWRELIGLVGNTGLRIKLPWG
                     APHEEARAKRLAEGFDYVDVLPRMSLEEVARVLAGAKFVVSVDTGLSHLTAALDRPNI
                     TLYGPTDPGLIGGYGKNQMACCSPEQNLANLDATSVFGKIH"
     gene            complement(62417..63463)
                     /gene="rfaF"
                     /locus_tag="MOX77_000645"
     CDS             complement(62417..63463)
                     /gene="rfaF"
                     /locus_tag="MOX77_000645"
                     /EC_number="2.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001728214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-heptose--LPS heptosyltransferase RfaF"
                     /protein_id="HCA3356285.1"
                     /translation="MKILVIGPSWVGDMMMSQSLYRTLKARYPQAIIDVMAPAWCRPL
                     LSRMPEVNEAIPMPLGHGALEIGERRRLGHSLRERRYDRAWVLPNSFKSALIPFFANI
                     PHRTGWRGEMRYGLLNDARVLDKDAWPLMVERYVALAYDKGVMRTAKDLPQPLLWPQL
                     QVSEGEKSLMYSDFSLSSERPLIGFCPGAEFGPAKRWPHYHYAELAKQLINEGYQVVL
                     FGSAKDHEAGNEILAALNSEQQAWCRNLAGETQLEQAVILIAACKAIVTNDSGLMHVA
                     AALDRPLVALYGPSSPDFTPPLSHKARVIRLITGYHKVRKGDTAQGYHQSLIDITPQR
                     VLEELHSLLSEEGV"
     gene            complement(63466..64398)
                     /gene="rfaD"
                     /locus_tag="MOX77_000646"
     CDS             complement(63466..64398)
                     /gene="rfaD"
                     /locus_tag="MOX77_000646"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020233050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HCA3356286.1"
                     /translation="MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVD
                     LNIADYMDKEDFLIQIMSGEELGDIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLH
                     YCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANS
                     QIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVA
                     AVNLWFLESGKSGIFNLGTGRAESFQAVADATLAYHKKGSIEYIPFPDKLKGRYQAFT
                     QADLTNLRNAGYDKPFKTVAEGVTEYMAWLNRDA"
     gene            64601..65797
                     /gene="kbl"
                     /locus_tag="MOX77_000647"
     CDS             64601..65797
                     /gene="kbl"
                     /locus_tag="MOX77_000647"
                     /EC_number="2.3.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020239151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine C-acetyltransferase"
                     /protein_id="HCA3356287.1"
                     /translation="MRGDFYKQLTNDLETARAEGLFKEERIITSAQQADITVADGSHV
                     INFCANNYLGLANHPELINAAKAGMDSHGFGMASVRFICGTQDSHKALEQKLASFLGM
                     EDAILYSSCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANNDMVE
                     LEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFV
                     GENGRGSHEYCDVMGRVDIITGTLGKALGGASGGYTAARKEVVEWLRQRSRPYLFSNS
                     LAPAIVAASIKVLEMVEAGAELRDRLWANARQFREQMSAAGFTLAGADHAIIPVMLGD
                     AVVAQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVDAFTRIGK
                     QLGVIA"
     gene            65807..66832
                     /gene="tdh"
                     /locus_tag="MOX77_000648"
     CDS             65807..66832
                     /gene="tdh"
                     /locus_tag="MOX77_000648"
                     /EC_number="1.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonine 3-dehydrogenase"
                     /protein_id="HCA3356288.1"
                     /translation="MKALSKLKAEEGIWMTDVPEPEVGHNDLLIKIRKTAICGTDVHI
                     YNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGG
                     RTHLCRNTTGVGVNRPGCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSF
                     DLVGEDVLVSGAGPIGVMAAAVAKHVGARHVVITDVNEYRLELARKMGVTRAVNVAKE
                     SLNDVMAELGMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLGIPPSDMSIDWTKV
                     IFKGLFIKGIYGREMFETWYKMAALIQSGLDLSPIITHRFSVDDFQKGFDAMCSGQSG
                     KVILSWD"
     gene            67327..68361
                     /locus_tag="MOX77_000649"
     CDS             67327..68361
                     /locus_tag="MOX77_000649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HCA3356289.1"
                     /translation="MKNSKTKVSIIIPLYNAGADFNACMASLIAQTWSALEIIIVNDG
                     STDHSIEIAKHYAEHYPHVRLLHQANAGASVARNLGLQAATGDYVAFVDADDLVYPKM
                     YETLMTMALNDDLDVAQCNADWCVRKTGHAWQSIPTDRLRSTGVLSGPDWLRMALASR
                     RWTHVVWMGVYRRALITDNNITFVPGLHHQDILWSTEVMFNATRVRYTEQSLYKYFLH
                     DNSVSRLQRQGNKNLNYQRHYIKITRLLEKLNRDYARRIPIYPEFRQQITWEALRVCH
                     AVRKEPDILTRQRMIAEIFTSGMYRRMMANVRSAKAAYQTLLWSFRLWQWRDKTLSHR
                     RMARKALNLS"
     gene            complement(68348..69310)
                     /locus_tag="MOX77_000650"
     CDS             complement(68348..69310)
                     /locus_tag="MOX77_000650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divergent polysaccharide deacetylase family
                     protein"
                     /protein_id="HCA3356290.1"
                     /translation="MPQFRRSILTLATLLAFAHPVFAGKLAIVIDDFGYRPHTENQVL
                     ALPPNISVAVLPNAPHAREMATKAHNSGHEVLIHLPMAPLSKQPLEKDTLRPDMSSDE
                     IERIIREAVNNVPYAVGLNNHMGSAMTSSLFGMQKVMQALEHYNLYFLDSMTIGNSQA
                     MRAASGTGVKVIKRKVFLDDTQNEADIRRQFNRTIELARRNGSAIAIGHPHPATVRVL
                     QQMVYRLPADITLVRPGSLLNEPQVDTSRPDLTPQKIDAPRNPFRGVKMCKPKKPLQP
                     VYATRFFSVIGESITQSSVIVWFQHQWQGWGKIAAPKNMSAKTD"
     gene            complement(69314..>69693)
                     /locus_tag="MOX77_000651"
     CDS             complement(69314..>69693)
                     /locus_tag="MOX77_000651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HCA3356291.1"
                     /translation="RGQAYWPVRGPILHRYGERLQGELRWKGMVIGASEGTEVKAIAD
                     GRVILADWLQGYGLVVVVEHGKGDMSLYGYNQSALVSVGAQVRAGQPIALVGSSGGQG
                     RPSLYFEIRRQGQAVNPQPWLGR"
BASE COUNT        17290 a        16666 c        18032 g        17705 t
ORIGIN      
        1 tgccggacag taccggtatg gccaatgagg tagtgatgct gcgcgggcat aatgtggact
       61 acggcgcgcc agtcaccagc gccattcgtc ttggcggcgg gcgcatagtg gaagtggggt
      121 cgagcaatct ggcggcccgc tggcaactgg aaagcgccat taacgaaaag accgccgcgc
      181 tactgtatgt gaaatcacac cattgcgtac agaaaggcat gttgagcatt gacgattttg
      241 tacaggtggc gcaggctaac cacctgccgt tgattgtcga tgccgcggcg gaagaggatt
      301 tgcgcggctg ggtggtgagc ggcgcggata tggttatcta cagcggcgcg aaagccttta
      361 atgcgccaac ctccgggttt atcactggta agaaaacgtg gattgccgcc tgcaaagcgc
      421 agcaccaggg gattgccagg gcaatgaaaa tcggcaagga aaacatggtt gggctggtgt
      481 atgcgctgga gaattaccac cagggccaga cgaccgtgac cgcagcacag ttacagccgg
      541 tcgcggaagc gatttctgcc atccatgggc tttatgccga tatcgaacag gatgaggccg
      601 ggcgtgcaat ctggcgtatt cgtgtgcggg tgaacgcatc agaattgggg ctgaacgcgc
      661 aggacgtcga agcgcagttg cgcggcggcg agatagcgat ttacgcccgc aaatatcagc
      721 ttcatcaggg ggtttttagc ctcgatccac gcacggtagc tgaaggggaa atggcattga
      781 ttgtggcgcg actcagggag attgcagaac atgcagcaga ttaattttta tcgtcagcgg
      841 gtagcgatta acgtgctggc aaaggatatc gccaacgcga aggctatcta tgaagccgcc
      901 gaaggccatg cggtcattgg tgtactttcc gcgcagttcg ctacggtaga agagggcgtg
      961 ccggaggtga aacgctggat ggcggaggtg ccgtctatct cggtggggct gggcgcaggc
     1021 gacccggcgc agtactacaa agcggcgatg attgccgccc atactcaccc ggcccatgtc
     1081 aaccagacct ttaccggcag cggcttcgca gcgggcgcac tggcggcgac aggcggtgag
     1141 caaacacata ttaacgccct ggtcagcccg acgggaacgc ctggcgaggt ggtgatttct
     1201 accggcgtca gcagcagcca gggaatgcca gcccgcgttt cctgtgaagc ggcggtacgc
     1261 atgatgcagg atatgggcgc acatgcggcg aagtttttcc cgatgggcgg cgaaaagtcg
     1321 ttaccggaac tctatgcgct ggcgacaacc gccgcccgcc acggcatgac gctcatcgag
     1381 ccgaccggcg gtatctcact ggataatttc ggtattatcc tgcaaacctg cctggaggca
     1441 ggcgtgccgc gcgtcatgcc gcatgtttac agctcgatta tcgatccgca aaccggcaat
     1501 acgcgccccg aagacatcat tcagttgatg gagatagtca aagcgctggt gtgagattta
     1561 tcgccgaaga gcgctacgtt tacctggcct acagatgacg tgtatttgta ggcccggtta
     1621 gcgttacgct accgggcgat aatgcgtagc aggctgagca aaaatgtacg tattgcagcc
     1681 gtcagtgatt ccctttcgag cctcctcgca gggttaaatt ttcctgaatg ctgtctgtat
     1741 ttttggcgag tacagtggcg tcatcttatt cctcaggtga cggatcgcca tgaaaaaaag
     1801 ccccacgtcc acgcctcatg atgcggtatt caaaacgttt ttacgccatc cggataccgc
     1861 gcgggatttt ctcaatattc atcttcccca tttgctaaga atacgttgcg atctgacgac
     1921 gttgaaactg gcgccggaca gttttatcga gaaaaattta cgcgcgtttt attccgacgt
     1981 cctttggtcg ctaaaaacgt gtgaaggtga cggttatatc tatgtcgtta tcgagcatca
     2041 gagtacgccg gacgcgcata tggcgttccg gttaatgtgt tacgcgactg ccgcgatgca
     2101 gcgccatctg gatgctggcc ataaaacgtt accgctggtg attcccatgc tgttttacca
     2161 tggcgcgaaa agcccgtatc ccttttcgct ttgctggctg gatgagtttg gcgatcctgc
     2221 actggcgcgt cagctttatg cgacggcatt tccactggta gacattacgg tggtgccgga
     2281 taacgagatt atgcagcatc gacgtatcgc gatgctggaa ctggtacaaa agcatatacg
     2341 tcagcgcgac ctgatgggat tggtcgagcg tttagcggta cttctgatta cgggaaacgc
     2401 taatgacagt cagctaaaag cgctgtttaa ttatttgcta atacagcatg gcagcacgcc
     2461 tcgttttggc aagtttatcc gcgaggtggc gcgttgtgtt ccccaacaca aggagagatt
     2521 aatgacgatc gtagacagaa tacgtgaatc ggggcgcaga aaaggtaagc gtgaaggcgt
     2581 gcaacaaggc atacagcaag gtatacatca aggtaagcag gaggaagcct tgcgtattgc
     2641 gcatacgatg ctggaacagg ggatcgagcg agagatggtg ctgatgatta ccgggctttc
     2701 tgacgaagag attaaggcaa agcgccatta aacttttccc tcttccgccc ggtcatcgtg
     2761 attatcaacg gcgttaagcg gcccgcgcgc gtcgacggga atcgagggag atcagaatca
     2821 ctgacgagag aatgagcagc gtgcccagcc agtccggcaa ggtaaaacta atccccaaca
     2881 gcagcagcga cagcagggcg ctgcttaacg gttccgcgca gcttaaaatg ctggctttgg
     2941 ggccaccaat cagctgcgcg cctttcaaat acaggctgaa cgtcagcgac gtaccgatca
     3001 ccaccaggta gaaaaaggcc agaatcaggc tgccgctcac cgcaaagtgc gttccttctt
     3061 tagcgtagaa gggcagcaga ataaggccgc caaaggacat actccagccg accactggca
     3121 gcgtgccgta ttgggcgatt agcctggaag gccaggtcgt ataaaaggcg gcggcaaatg
     3181 cggaggcgat accccagaac agcgcgcctg aagagatcga cagcgatgtt ggattgccgt
     3241 gagtcaccag taaaaaggtg ccgataagcg atgtaagaat ggcggttaag accagaatgc
     3301 ctggtcgtgt tcttcgcgct aatgcaaacc acgcgacaat aatggtcggc gataaaaatt
     3361 gcagcactgt cgcggtggcg gcattggatt tttcaatcgt gagcaggaag gttagctgaa
     3421 cggtgagcgc gcccaccacg gagaaaatca gcagactcag tgcatctttg cggtttttaa
     3481 gaatcgaaaa tatcttatcg ccgtgcataa aggagaaggt caccagtatc agcccggcga
     3541 ataacaaacg tatcatcgtc aggaactgtg acgacatacg gctttgctcc atgatgtact
     3601 gcgcgcaaac gcctgaactc ccccacaata cggcggcaat caggacgttt agcatccctt
     3661 ttctggtgga acccattttt tcctcgtcat gttgttttat ttttttacgt gcaggcatca
     3721 taacagagct atcgccggca ttaagcagga atttattgtt taatgatttc agacgagcct
     3781 gttattgaca taatattgtc atttttttgt cacgggaaat atcaaacaaa cttaaacaaa
     3841 tcgtcactat ccccgccttt gcactttaca gaacatattg actgactata ataagcgcaa
     3901 attcatgcag gagtaatatg ttggacagtc acttttacgt aaatcatctg gcaagttaac
     3961 gcacgctatt cctgcgctgc ttgccgaacc ggtgggcagc aatctcccct tgtgacgatt
     4021 gtcatcccaa taatgttaca acacgcgcat tgtcgcgagg taatcgtcat gttcatgttt
     4081 aaacacgctt tatttcctcc gccgttaaca cgacgctaat tgcctcaggg cagaaatttg
     4141 tcgtgtgcta aatatagcac gtacttattc ttccagaaaa aatggaggaa cgtatgttaa
     4201 tgtttcctta tattttaaat ttactggccg ctatgctgtt gggcgcgctg attggcgcgg
     4261 aaagacaatg gcgtcaacgt atggcgggat tacgcactaa tgcgctggtg gcgacaggcg
     4321 ccgccgtttt tattctgagc tccatgacga catcgccaga cagccccggg agaattgcgg
     4381 cgcagattgt ctctggtatt ggctttctgg gggcgggcgt catcatgcgc gaagggatga
     4441 atgtgcgcgg actgaacact gcggcaacgc tatggtgttc ggcgggcatc ggcgtgttat
     4501 gcggcttagg gcagttcaaa aatgcactgg cggcgacgat cattattctt tgtgccaata
     4561 ttttattgcg tgaagcggcg cagcgtataa atcaactccc ggtatccgcc gaggcagaaa
     4621 aacgttatat cctgaaagta acctgtaata aagaagatga gagcgcggtt cgtcagtggt
     4681 tactgaatat cgtaaaagag gccgcgatct gtttacaagg gttaggttcg gtccccgctc
     4741 aggaacaggg ctataaagaa attcgtgccg agctcgtggg tcatgctgat tatcgtaaaa
     4801 cgcgagaact gattatatcc agaataggtg ataacgataa tatcaccgca attcactgga
     4861 gcattgatag tcaataatag ttttttattc aattgcaaca ttacgccagg cgtataagga
     4921 gggaatgatg gatattcccg agtcgataaa ataaaaccca ctcaaaatag tgagtaagca
     4981 ataacctttt ttatgcatag ataattctcc cggggcattc accttcaaat cgtgagttta
     5041 ctattccctg ggcgtgatat gcaggaaaca ctacacctta attttgggga ttcatcatga
     5101 ctgacatgaa cattgaaaac cggaaactca atcgcccggc gtcagaaaat gataagcagc
     5161 ataaaaaagt atttccgatc gaagcggaag cttttcatag cccggaggag acactggcgc
     5221 ggctgaacag ccatcgtcag ggcctcacga tagaagaggc cggcgaacgg ttgaaagtgt
     5281 atgggcgcaa tgaagtggcg catgagcaag ttcctccggt gctggttcag cttctgcagg
     5341 cattcaataa cccgtttatt tacgttctga tggcactggc aggggtcagt ttcatcacgg
     5401 attactggct cccgttacgc cgtggcgaag agaccgatct caccggcgtg ctgattattc
     5461 tgacgatggt cagtttgagc gggttattgc gtttctggca ggagtttcgc actaacagag
     5521 cagcacaggc gctgaaaaag atggtgcgca ccaccgccac gatgttgcgt cgtgggccgg
     5581 gcaatatagg cgcggtgcag gaagagattc ccattgaaga actggtgccg ggcgatgtgg
     5641 tttttctggc cgcaggcgat ctggtgcccg ccgacgtccg tctgctggcg tcgcgcgatc
     5701 tctttatcag ccagttaatt cttagtggtg aatcattacc cgtagaaaaa tacgatgtta
     5761 tggctgatgt ggcaggtaaa gacagcgagc aattgcctga caaagataag agcctgttag
     5821 atttgggcaa tatctgtctg atgggaacca atgtaaccag cggcagagcg caagcggtcg
     5881 tggtcgcgac gggaagccgt acctggttcg gctcgctggc gaaatccatt gtgggtacgc
     5941 gtacccagac ggctttcgat cgcggagtca acagcgtgag ctggctgttg atacgcttta
     6001 tgctgatcat ggtgccggtt gtcctgctga tcaatggttt cagtaaggga gactgggtag
     6061 aggcttcgct gttcgcgctg gcggttgcgg ttgggttgac gccggaaatg ttgcccatga
     6121 tagtcagttc caacctggca aaaggcgcga ttgcgatgtc gcggcgcaaa gtgatcgtca
     6181 agcgcctgaa cgctattcaa aacttcggcg cgatggatgt gctgtgtaca gataaaaccg
     6241 gcaccttaac ccaggacaat atttttctgg agcatcatct ggatgtgagc ggtgtaaaaa
     6301 gcagccgggt attgatgctg gcctggctga atagtagcag ccagagcggc gcccggaatg
     6361 tgatggatcg cgccatactg cgttttggcg aggggcgaat cgcaccatcg acaaaagcgc
     6421 gcttcattaa acgcgatgaa ctgccattcg actttgtacg tcgccgggta tcggtcctgg
     6481 tggaggatgc gcagcatgga gacagatgtc tgatctgtaa aggcgccgtt gaagagatga
     6541 tgatggtagc cacccatctt cgcgaaggcg atcgtgtggt ggcgctgacg gaaacacgcc
     6601 gcgagctgct gctggcgaaa accgaagatt acaatgctca gggattccgt gtattgctga
     6661 tagcgacacg taagctggat ggttccggga acaatccgac attaagtgtg gaggatgaga
     6721 ccgaacttac catcgaaggg atgctcactt ttctcgatcc gccgaaagag agcgccggaa
     6781 aagctattgc cgcgttgcgg gataacggcg tggcggtcaa agtcctcacc ggcgataatc
     6841 cggtcgtgac ggcgcgtatc tgtctggaag tgggtattga tacgcacgat atcctgatcg
     6901 gaacccaggt tgaggcgatg tcggatgccg aactggcgtc tgaagtggag aaacgcgcag
     6961 tattcgcccg gctgacgccg ttacaaaaaa cgcgtatttt gcaagcgcta cagaaaaatg
     7021 gtcataccgt tggttttctt ggagatggga tcaacgacgc gcccgcgctt cgtgatgcgg
     7081 atgtgggaat ttccgtcgat agcgccgccg atattgctaa agagtcatca gatattattc
     7141 tgctggaaaa agatctcatg gtgcttgagg aaggcgttat caaagggcgg gaaacctttg
     7201 gcaatatcat taaatatctg aatatgaccg ccagctctaa tttcggcaat gttttttcgg
     7261 tactggtagc cagcgcgttt attccgtttc tgccgatgct ggcgattcat ctgttgatcc
     7321 agaatttgat gtacgatatt tcgcagttgt cgttgccgtg ggacaaaatg gataaagagt
     7381 tcctgcgtaa gccgcggaaa tgggacgcga aaaatattgg tcgttttatg ctatggattg
     7441 gcccaacgtc ttctattttc gatatcacaa cctttgcgct gatgtggtac gtttttgcgg
     7501 ctaataacgt agaggcgcag gcgctctttc agtccggctg gtttattgag gggctgctct
     7561 cgcagacact ggtcgtgcat atgctaagga cgcagaaaat accgtttatc caaagtcggg
     7621 cgacgttgcc ggtattattg acgaccggct tgattatggc gataggcatt tatattccat
     7681 tctcacctct gggcgcgatg gttggactgg agccgctgcc gctgagctac ttcccgtggt
     7741 tggtggcgac attattgagc tactgtctgg tggcgcaagg catgaaacgc ttttatatca
     7801 aacgctttgg ccagtggttt taataatgtt tgaggatcgc ccagatgaat cgctcacccg
     7861 ataaaatcat cgcgctgata tttttactga ttagcctgtt ggtgttgtgt ttagccctct
     7921 ggcaaatcgt tttctaacga ggtgacgcca tgcaaaaaag agggttggac aaaatttttt
     7981 atcaggttgt cctgatagca atcatcctga ttttactgac tatctggata cgataagctg
     8041 ccgttggcga gccccgctta aaataagaat cgatgtagtt gttcttttta tggcggggcg
     8101 ctattttcat ggtatcccac atgagaaggg caatatcatg aataatcgtc gtggtttaac
     8161 cgccgtcctg gcgacgttga ttacgttttc cctgagcgct acgcctgtgc tggcgaatcc
     8221 gggaaatggc aatggcggcg gacatggtaa taacgcggct aatcagggta ataacggtaa
     8281 cggacataaa ggaaatgccg ggcaaaaaac ggaacaccgt aaaaatggcg gtaaaccgga
     8341 tcacgtcgag tcggacatta gctacgctgt cgccaggcaa ctggcagtga atttagggct
     8401 gacgggttat cagtctttac ctccggggat tgcgaaaaat ctggcgagag gaaaaccgct
     8461 gccgccggga atcgctaaaa aacggtgccg gcgtctatgc tgggacaatt accttattat
     8521 ccgggctatg agtggaaaat cgttggggat aatctggtgc tgatcgcgct cagtaccgcg
     8581 gtggtcacgg cgattattaa tggcgtattt gattaagagc ctatcccacc aggcgttatt
     8641 ggcgcagcca gtttggacac ggacagcgcg caaaaaccgg agcgtacacg tagtacgtga
     8701 ggtttgactc gctacgctcg cccttcgggc cgccgcaagc ggcgttcaaa acgctaacgc
     8761 gttttggcga gcactgccca ggtccaaaat ggcaagtaaa atagccccaa tgggataggc
     8821 tctaagcgtg ttgtagtccg atgacatggc gctcatctac tggttgtagg ctgaataaac
     8881 aggcgataga taaaatagcc ccattaaatg gggctattta gccgcttcag ggcgttattt
     8941 atgcgcgttg agaatccagc agttcattat tttttactac ttcctgcgct ttggtataac
     9001 tttcaatcag tagctgatag gccgggaata ttttggtata tacatccgcc cattctgcgg
     9061 catcttcccg attccaggta cgttgcagct cagaggctac cgccgcggta tccattggta
     9121 ctacgcccgc ctgcaccacg cgggccatcg taatttcctg cgccatttta ctgtacgtac
     9181 cggaggcatc aattaccgca aataccttgt acccttccgc gacggcgctg atggctggaa
     9241 aagccatgca gacactggta atagtaccgg cgatgatcag cgttttacgg cctgtcgctt
     9301 ttaccgcctg tacaaaatcg gcattatccc aggcattaat ttccccttta cgcgcgacat
     9361 attgcgcgtg gggcgcattc gcatggattt ccggaatcag cggaccattt ggtccctgtg
     9421 gtacggatgc ggtagtaatg accggcatat tgcataaggt agcgatttta gccagcgccg
     9481 cggcgcgcgc gcgtaattcc ggcatcggca tgtcgccgac ggtctgaaac aggccacttt
     9541 ggtggtcaat cagcagcatg actgcgtcgt tagcatcaat ggcagggcgt tgaccgttaa
     9601 aattcgcggg tgtagacata attcattcct tgttgttgcc tttcactgat agtcactatc
     9661 agtgttaaag tcattaatcg ccggggcgat ttccgttttt aagctgatga cagtaatccg
     9721 ttgccgattc tggattaccc tgttgagttc tttctgaagg aatattcatc ggcatcacct
     9781 tcagtcaatt tactttcacg cgaatcggtt atcacaacaa tattcatatt atgattaaat
     9841 gtttctattt tacatgtcag agaggattat tgattgaaaa aacaggctat atccctacaa
     9901 attgtttctg atggatagtt ttaaaattat ttagtataag tttgaaatat atcaattaag
     9961 agttaactta tttatattta aataacataa agcacagctt aaatattaag tgggaagcgt
    10021 gttgttatta agtatggcta ctgcaactct taataaattg gaaactatcc ctacataacg
    10081 agtgctgctt ttttggatat tacaagccat tatagagaac acgttcaata aaaccctgtc
    10141 tttcatatga tatagatttt caggatatat tttctcatga tttatatatg agatattaaa
    10201 gcgtagtggc acagtaaatt tggctacttg attaaaggtg atattctcac ctcaatacaa
    10261 aacaggaggc ttaacgaaca agaaaaccaa acgtactttc acccctgagt ctgctataat
    10321 gagaaaagcg gtgtctacgc ttacctgtta atgtcttatg cctctcgctc ttctatatga
    10381 tcggtatgtg caggggacaa tccatgtcct gctacgcagc cacagcatca gactatactc
    10441 agtggtgtct attaaccctc tccaactacg ttatgttttg gcatggtaac aatgcgatgt
    10501 tatggataat taacgataat attgaattta atccagaaat gaatcgcctg gcgtcattat
    10561 cgaggccaga tctcaacatt attctgacaa cgcccgccag ccgctgcttg cgccttctgc
    10621 tggaaaacgc cccctccgtc gtctcacaac aaacattctt tcaaaaagta taggaagaag
    10681 acggcatggt ggtgtcggca aatacgcttt atcagaatat ctccattatt cgccgcggat
    10741 tacgtaccgt tggcgaaaat gaagatacgc tgataatcac ggttccgcgt agaggctttc
    10801 agattgagcc tggtgtgagc ctcatgacca tccgcaaaga cttcgctcag acaatagaaa
    10861 aaagggtgag gcgccaccgc gtatgtcagg gcgttggttt aaacattatg tacctgtact
    10921 ttggatgacc gggacatttg ctgtcggtat tttgcttggc actatcagct ggcaaaccgt
    10981 tcctgataag gatttttatg atcgctacac gctggttgaa acaactcagg gctgtcattt
    11041 tttctcgcgg aatgaagata tcgaaagcgg tagccgcttt gcaggctata agttaatgat
    11101 tctaaaaacc ggtatggatt gtcagaaata cccatgggtc tatttccctt ccagcagtcg
    11161 caccccagcg gttacggcat tgatttgtca gcaaccttat aaaacgcgcg gtgatacagg
    11221 ctgcgtgacg ctttttttcc gcggggtgac acatgggtaa aaaggcactg atgttagcct
    11281 gcctgacgct actgtttctg ggtgtagggc ttgggcatct ttttcattta tatacggaaa
    11341 agaaccggga tccagagaaa tgtacggcgc ctgtgattgt gttttataac aacactcagg
    11401 ctaacctgac gctggacttt atgtattcgc tgaaaaaacg cactggagtg gtttccatca
    11461 gcggaacgta ttacgtcgat aataaaatga gcggcgtgat ccgccgtgat gtttcctatg
    11521 tatggagtga aaataaagac agcacccatt ttatatcgac ggatatcaac aaagtcacgc
    11581 gtgacgaaac actgtccgat gcggttatcg agacggtttt acccgatttt tatgtctatc
    11641 cagggaaaag tatcagttac accatcctga ctcagggtca tcgtggcttt atgttcacca
    11701 tcgggaaacg cccgatattt ttctgtacac attaagcggt tttgggagcc gttcatggaa
    11761 cgtatcagcc aaatgaaagc gcttccgggt aaaagccgct gaagatcagc ggctctgttg
    11821 ttacctgaat cagaaactgt atttaacccc cagtaggcct tgggtattac tatagccctg
    11881 gtcacctacc tgttgcgcca cgttacccca tacgttcagg cgcggggtaa tttgtccttc
    11941 aatacccact ttcagttcac caatattttt cgtaccacgc atatcgctgc tgacatcgtc
    12001 catcttcacg ctggcaggct gcgtattatg gatccagttc gcttccacga atggctggaa
    12061 ctctcgagat ttattgtcat caatagcatt gtggccgtta atataggctt ttacgcccat
    12121 gcgggttagc agattaccgg cggtatcatc cttgacgagg gtaccattgg cttcgcgatg
    12181 gtcgttagcc tgcacgccca tccataccac ctgcgctttg ggctgcaacc agtagctttg
    12241 atgcgcgctt tcacctaacc tgaaactgta accggcttca accgaggcgg taattccttt
    12301 ggatttatat ttctcagcgg cctgatcctg acccatgacc ttgttatcaa accagttgta
    12361 cagcatccag gtatccacat aagccccaga ccgatcgata ttgttagcat accaggtgcc
    12421 gtaaaggccg acgctgtaac cggtgacttg accacgggaa tgatagtcac tcacggacga
    12481 ctgcgtgcgg ttctggctgt tggcataacc tgccattgca ccaatatgcc aacggtcaag
    12541 actgtcagtg ctccactgtg ccagatcgcc tcccagttgt aacacatagc tgttgatgcg
    12601 ggtttttagc tgcccgctgc catcgttgaa gcgagtatgg gcgccgacgt tacgcatcca
    12661 caggctggtg accttcttct cacccgtcag catgtcggtg tactgggttt cacccagacg
    12721 gtcatggaga cgcgtcatga acagcgtatt tgccgcatag ttgttggcaa gatagctgcc
    12781 cacttccgga cggaactgat gttctgttat cggcggtgtg tcagattgtc ctatgtcagg
    12841 aatgaccgga tcagggatga ccgggtctac tggatcaggg tctactggat cagggtccac
    12901 cggatcggga ataacagggt cagggataac cgggtctact ggatcagggt ctaccggatc
    12961 gggaatgaca gggtcaggaa taacagggtc taccggatca ggaataatcg gttcgtccgg
    13021 ctcaatgtag ctggtcagat accagttttt acctttctgc accacgttgt agtcataggc
    13081 tccggcaaca atacgacttg ctttttcgaa agtaccgttg gaattgccag caacgttaac
    13141 aatttcaata ccttcaacgg tttgagcccc ggctcctcca atattattta ctgcaacaaa
    13201 tgtgttgcct gaagtattgc cgagaacctg cagcctgtcc gtttcggaat catcatcgtt
    13261 gagcacagta ttaaagacca gcttaccgcc gttgcctaca taatcttcat tgatggtgag
    13321 cgtttgccat ggttcgccat cttcatggct gaagttaatg attgcgccac tattcagcgt
    13381 caggtcagtg agcgttgagc tgctggtcat attccaggtc gcatcgctca tttgtacaga
    13441 gataacgcct gtgcccgccg tagcgctggt gatgtacgac gccccgtccc atcgcgagtt
    13501 gtccgtcata ttgagcttaa tcgtactgtt ctgctgcggt agcgtaccgc tggcagcggt
    13561 ggcgccagca gcacgaatat caccgtcgat gacgaaacga cctcctgaag aaccgtcaac
    13621 aatgccgcca gtttccgtgc tgatggcgta actttcgcta ctgttatcgc ccgccatagt
    13681 aatagccgca ccgcctgcca gattaatggc gcctcgggag agggcgtata aaccggcagg
    13741 ggctttacta taggatgcag ccttactggc gctgttaacg ctaatagtgg cattctctcc
    13801 caaattaacg gtagcgttag ttgcatatac cgcgtgtgcg ctggcaccgt tcaccgtaat
    13861 agtagtgttg ttgctaagct cggttctgga ggaggatgct gcgtaaatcc ccgttgagga
    13921 tgcgccggag gtttcgatgg ttgcatcgtc acccagacga atcaacgaac cgctttgtcc
    13981 ggtacgcagc ccctccgaac tgtcgccggt agtaactata tgtgcacacg attgccgacg
    14041 acaatcgtat ttttggcacg tgacgcatcc cgcatggcgt tagctgtaat tccacgtccc
    14101 tggctaccgg tcgttttgat atacagatcg tcgccgacgt aaatattggc cgatccggtc
    14161 caaccctggc ccagtgagtt atatccggcg ttaataccgt caccatcctg accatccacg
    14221 tagatgttgg tacggtcacc ggtaataata aataccgggt tatccggagt atttgcgccg
    14281 tgagtacgga tgccatcgac gtctctacca ttattcgcgg cattcgccga ctgcgtccga
    14341 atggtcaggt cgttgccaaa aatcacgccc ggacttcccg tcccgctgtt ctgaataacc
    14401 gtgacagtgt gttcaaacgc ctccgcaccc ggcccattaa gcgtgaggcc attgccataa
    14461 accgggatgg tgccggtgtt ccactgataa acgtagttgg gcatggtacc gactttggtg
    14521 aaaccggtac tggcctgagc gggaataata gcctgtaatt ccggcggcag ctggctgacc
    14581 agcccactgg atggcagact atcaacgtca acccaggccg cctgggaggg aaataccata
    14641 gaggctaatg ctgctgatac cgctatggcg atgaatgagt aattttgggg agttggcatt
    14701 ctgcctcctg cattatggcg taaagcgtct tccacatcgc aataatatgg aaataataaa
    14761 aatggaaacg gatctataaa atatttgata ttattttatg aatgctatgc cctagcttat
    14821 tttcaagccg cagcttatgc acataaagtt tcttaatatc aatattgtca atatttacaa
    14881 tctgctgaat acttattcct gatacaaagt gcttcagtaa tataaattcc gtatagttaa
    14941 gcgttcgtcc acgtttactg ttggcaagcc gaccggtaaa caagcggtgc atcttttgct
    15001 gttgcacaat atcatcgtca tcggaataaa taattccttg tattttattg cttttcaaaa
    15061 tccagtaatt ggccagcgga gttaaacttc tgtcagaaat caggacaata tgcataccac
    15121 tgtttgccag actgtcagcc cattgtaaat cggtaaatcg tcgaagattc gggaaagaaa
    15181 aatcaacaaa gataaaaccg ctggataaat ggttgtgtct atcaagcaat aacttttcaa
    15241 taaacccttt tttcaggaaa gcattaccat ctggccagat ggaaaatgcc gcattatgac
    15301 agtattgcac ccgtactgcg ctgtcaggga ataattgaca ggataaatcg caactaatgc
    15361 aatggacaat ttgtgaaggc tttctcatca tcctgaacga ctcccgtcga tgtttctatt
    15421 aatatttcat tggtaaataa atgtgtcaat ccagataata tacagtgcta cggctgtcaa
    15481 aagtcgcgaa ttattgtcag tgtcataaac tcctggaaag acctaaaata cagctttaag
    15541 gaaccatgac agatccgaca gtcgtaatac atcatttcgg attcgtattt cacccattga
    15601 gatttttata cataatctcc aatatcataa aaaatcttaa aacagcacta tttgctaaat
    15661 tatgaggatg ataaataacg gttctcaata ccatctgtct gctgccctcg tcactatcgg
    15721 ggtgatgtga tgaaatataa aagtaaatcc tgtcaacctg taatgaattc ttattattaa
    15781 aacctaattt aagatttttt cttttattgc attgttattc aatgacttaa tggtgaaatt
    15841 tgtgctctca tcaacttctt atatacaaat ttaagactat tttatagaga cgcatgtaaa
    15901 ctttaagggg gtgtaatgct aatgccatgg gaaaatcttg taacttaacg ccgggagtca
    15961 taccttgcca ataagttgat ctgacttaat tctgaacgtg acagtgtgag caaccgacag
    16021 acttatcggt cgaagcaact tcagcttctg gcttctcttt tcaattgctc atttgatgaa
    16081 aactctttcc cggagcacat tagtgagaaa caggatgtgg tcaaacccaa tgtccataga
    16141 tgtcgtcagt cacttcagaa atatccgcct cctggcagat atctttaacc gctcgtccag
    16201 cttcgaccaa cttaattacg gcgatgttct gatgctcagt gagacgggct ttacgcatag
    16261 agattccttc gtcagcagat cgatgacgtg atctctaaat gtgaatagca cgattatgtg
    16321 ggatacgtac aaaaaattaa actaactgcc agtaatatga gtacttggta taagaatgta
    16381 tacggatata ttactactga aatataataa tgggaggggt taagaataaa caggacgtat
    16441 gggagaacaa gggtataaag atgaaatgct tgcagtatct aatagataac aatgaaaaat
    16501 caggtaactg agaaactatt cagtgtttag gttgatgtga tattgagtca ttcagccgct
    16561 acagcacatt atcaggataa tttcgtctgg ataaaacgga ggaatgaatc gccacaggtt
    16621 taacagacac cgctgagtca tttaagatga cttaaagaga gaagcccatg agcggtaaac
    16681 gttatcccaa agcgtttaaa attaaagcgg taaaacaggt tattgagcgc ggccattctg
    16741 tttccagcgt cgcaacacgt cttgatatta ctacccatag tctttacgcc tggataaagc
    16801 cgccacattc acgacggcat catgttgacc tgaatctgac ggggcataca ggcagttctg
    16861 gctggaatcg ggctgtgttt atggctatcg caagatctgt ctcgatctgc gggatatcag
    16921 gaacaatgcg gtgtaagcaa agtctggtgg ttgatgcaac gtgtggggat aaaggctcgg
    16981 gcgatcacag gaatcgtatt tgaatgttaa cttattgatt ttatgtttat attttgtatt
    17041 ggataaatga gtaaccccca taagcacccc caaatgattt tgcttgtggg gtttggggac
    17101 atcctgagct actttttagg ctctgttttc cactgtaaca aagcggcgat atctttctca
    17161 ccttcggctt cttttaaacg ccgttgttgc tcggcaaact ggctatattc cgcctgcgct
    17221 ttttcatcgg ccattttctt actgacttta cctgcccctt gcaaaacctc acggtcgtta
    17281 aattgcagga actgatccag cttatcctgc cagtcgcgta aaaagacctg ttgacgacga
    17341 cgggcctgat cttcggcgaa atccagccac atgttaacta cgcggttaag ctcgctgact
    17401 tcatcctgag tgagataatt ttttgccacc gtcacgtcac atttgcgcac ctcttcacct
    17461 ttatagctgg tcagccccat atgcggctgg caggcgtcag cacgctgatg aatgagttca
    17521 gcggcggtat acccggtaca ggcaaaatgt aacttgttct ggatggtttg aaaaaactgc
    17581 gtggtttctt tgagggacgg ttgataatcg gcggccagag caaagatctc gcgtacccgc
    17641 aaataaaccc gacgttcgct ggcgcggata tcgcggatac gctccagcat ctcatcgaaa
    17701 tagtcgggta cagccgatga acccacgggc ggatttttca ggcgctcatc gtccatcaca
    17761 aaacctttga tcaggtattc ctggagcgtc tgggttgccc actggcggaa ctgcgtgccg
    17821 cgcggggagc gaacgcggta gccgacagcg agtatcaacg gcaaactaaa gtattgaatc
    17881 tgataatttt tcccatcact ggcagttgtt cggtaaaacc gaacaactga attttcttca
    17941 agctcgccat ctgcaaagat gttctttata tgctcactga tggtggcttt agctttaccg
    18001 tatagttcgc agatcattcc ctgagagagc cacagtgtat tgctttcaaa gcggcattca
    18061 acacgcactt tcccgtcacc gctggcaaac ataatgaatt cacctgccgg ggattgggtt
    18121 aagtatttat cttccatgtc gcctccactt acatctgact cgtgatgctg taatccgctt
    18181 agtatgccag aaattcctgg tgaagctcat tacgcagata gcgtttattt tggcgggtag
    18241 cgcccccgga tagtgtttca tcacgatatc attcatcttc tccaccagat ccagacgctt
    18301 aaacgtgata tgcccactgc ctttctgaaa gtagtgcata gagaataaat catcctcaaa
    18361 aacctgctga tgcgggttat cacgaatgaa gtccatcagt cggatagtca catcgtgtcg
    18421 gttatcggga atggttttac catccagcag gaacaacatg cgctccagat ccgcaatctg
    18481 gtcacgccgt cagccccaat tcaggctgta gccccatcgg tcgtgcttta ccaggccgtt
    18541 aacgatgatc cgcttaccga agcagcaggg attattggtt ttatagtccc agcttagccc
    18601 tttaaataca ttgataatcc cacgttcgaa aacatcctgt ttattgtggt ggagttgttc
    18661 aaaggtgctc aggatgttgg cttcgctgat ggccggaaga tctcctcctt cgagattttt
    18721 agcccactgg ctgcgggctt cagcgtccat taaggtcaac atcccggact tcagcatcag
    18781 atcgcgccaa atgctgcggt caatattacg ggtgatcacc ggcatcgctt tatcaaccgg
    18841 ttgcatcaac cagcagtcaa aggaatggcg ctgtcgcatc gcccaatgct ccgctacatc
    18901 accaccgatg ctggaggtaa gccgcgagat gtcatcaagc ttatgaatca ggatttctat
    18961 caggctcagc gcagcgtcgc gccctgtgac gatgcattca atactggtcg agcaaattag
    19021 ctcattatgg tcagttaaga cttcagcttc tgtttgcata tttttggtcc atataaaagc
    19081 aaacgcgcct gccgggagtg gcaggcgcat tatgcggtga aataaaggtg aataaatatt
    19141 gagggtgtaa atcaggaagg cgactcgcaa taaatcatgc tgtcgccctg aatcaggaat
    19201 agtggtgtta aattaatgca ggggcgtggc tctgtaatac ctgttcagct tcttgctgga
    19261 aaaactggcg tgtaatgctg aagaattcat gcagtttatg atctggcgaa gggaccagat
    19321 caagctgaag taattggtgc agatcccagt ctttctcaat atgttcttca aaaagctgtt
    19381 ccagctcttc ccaatgatta cgacgctccg tttgaaggaa tccgctgttc aggttcaggt
    19441 gatcaatggt gtactgtgcg tactcagctt cctgctcagt taaatctatt gaaggaacca
    19501 catgcccatt agataaatag gcaaaataac gagaacagtc agggaggtgg caatgaataa
    19561 actgtgccat atccacagat ttattctttc cctgtacatg accaccgaac gtgttgatgc
    19621 caagctgggg caaaccattc tcagagtcta acgcgctggc tgcgagattt tgataatcga
    19681 aggttcgccc tggctgctgg cttttatttt cgacgtgttc aatgtgatag ccgaggccac
    19741 gcaaatcagc acggatttcg ctgtaacagc aaagatgata ttgctcattg agcagaagcg
    19801 tcactaaatc tgctttgtct cgtctaaagt ttcgccagcg acgggtcgat tgatccgaat
    19861 cttgtggtgg attttcattt gcagtgagta aggcatctgt ccccggcgag ttttgatcac
    19921 atgcctcatt gtgccttccc tttcagaaag ttacggcatc gacaaacgta gcgcctgcgt
    19981 taataaacgt aaggctatag tgccttcaag tagatgagta agctgcgacg ttactgctcg
    20041 tatgaacacc atccaccctt atgatgtgag cccgtacccc catgtggatg ttgacccttt
    20101 gggcaggcaa gcgcaccgga tgatgccgtg acggtaataa aagcgataat catcgctgta
    20161 aataatctct tcatatataa ctcacattaa taaattggaa catattacta cctactacag
    20221 aatacgcata cttgatacgg acttagggga taatataacg tgtactttag tttaaattct
    20281 atccttcatg tggcataggt tatcaggata ggttttcgtt atgaatttta tctgggatat
    20341 tgaagcaaca tattgtgggg gggatatgag ttataaatat gttggtaagc atggctgtga
    20401 tgttgcattg cggatgggct ataaagaata ccccgatgaa aatgcttatg gtgatgccta
    20461 ttatattaaa gatgggttaa aatggatatt taatataaca ggcttaaaaa aacggcttgg
    20521 cgtatacagc gacgacgatc tccgtaaaca gaactatgat gtagatacct attatcgggt
    20581 tgaaaaccaa caggaagaaa gtgcagatga tgaaatgcaa tcgctatatc ataatttagc
    20641 ggtagaagaa ggagaacccg tgtatctgga gggaggcatg tatctttatc cggatggctc
    20701 tatacgttga tctcataatt ttggtctggt aagcgttatc tcttttgaga aaggatgagt
    20761 ctgtaagtat gacccacaag ctcgtttggt gattagttaa gtcccgcccg cgttagtcct
    20821 ggcgtacttt tatcccttct ttgcggacga tatcccacaa taaatggacg ttcggtttta
    20881 gcaatcggta aatggtgatt aataaaataa tattccactt tctctctcca cctttccttt
    20941 cgtattatat gcaagaacta gtcttaataa taagcaaata ctttgtcccg aaatagagga
    21001 cgaatggtgg gcatgagaga aggattttgg cggaagatca caggagtcga acctgcccgg
    21061 gaccgctggc ggccccaact ggatttgaag tccagccgcc tcaccggaga cgacgatctt
    21121 ccgcgcctcg attgctacat ggaggcgcgc gcattatagc tacttcctgg cgtttccaca
    21181 tcccctcccg tgctttttta acttcccttt ccttctgcca tgatcggttt catataaacc
    21241 cccataaaat ccattagtta catttcatca cactttttgg cgctaccctg atcacagaaa
    21301 acaagaatcg taatttgata accaaataac ggaatattca cgctcgcagg gaaggtttac
    21361 aaaaactgta accggtatca gtgagcgttg tgagcgttaa ggatgcgtaa tgaaaagtga
    21421 aattctctcc gttaaggaga agattggcta tggtatgggc gatgccgcca gccacatcat
    21481 ctttgataac gtcatgttat atatgatgtt cttctatacc gatattttcg gcattcccgc
    21541 tggttttgtc ggcaccatgt ttttactggc gcgtgcgctt gatgccatct ccgacccttg
    21601 catgggcctg ttggccgacc gtacccgctc tcgctggggc aaattccgac cctgggtgct
    21661 gtttggcgcg ttgccgtttg gtatcgtttg tgtgctggct tatagcacgc cggatctcag
    21721 tctgaacggc aaaatgattt atgccgccat cacctacacg ttgctcaccc ttctgtatac
    21781 tgtggtcaac atcccttact gcgcgttggg tggtgtaata accaatgacc caacgcagcg
    21841 tatctccctg caatcctggc gctttgtgct ggcaacggcg ggcggaatgc tctctaccgt
    21901 actgatgatg cctctggtga aactgattgg cggcgagaat aaggcgctgg gcttccaggg
    21961 ggggatcgcg gcgctctcgg tggtggcgtt cctgatgctg gcgttctgct tttttaccac
    22021 caaagagcgc gttgaagcgc ctgccaccca tacctccatg cgtgaagacc tgcgtgatat
    22081 ctggcacaac gaccagtggc gcatagtcgg cctgctcacc atcctgaata ttctggcggt
    22141 atgcgtgcgc ggcggggcga tgatgtatta cgtcacctgg atattgggca aaccgggcgt
    22201 gtttgtcgcc ttcctcacca cctattgcgt cggcaacctg attggctcgg cgctggcaaa
    22261 accgttgacc gactggaaat gcaaagtgag cgttttctgg tggaccaacg ccttactcgc
    22321 agtaatcagc gtggcgatgt tcttcgtacc gatgcacgcc acgatcgcta tgttcgtctt
    22381 tatcttcgtg attggcgtat tgcaccagtt agtcacgcct atccagtggg tgatgatgtc
    22441 tgacaccgtc gactacggcg aatggtgtaa cggcaaacgc ctgacgggga tcagttttgc
    22501 cggcacgttg ttcgtgctga aactgggtct tgccctcggc ggggcgctga ttggctggat
    22561 gctggcaggc ggcggttacg acgcggcggc gaaaacgcaa aacagcgcca cgatcagcat
    22621 catcatcgct ctgttcacta tcgtcccggc catctgttat ctgctgagcg ccgcgatcgc
    22681 taaacgctac tacaccctga aaagcccgtt cctgaaaacc attctggaac aactggcgca
    22741 gggcgcacac cgcaacgaac aagaatttac ccataaagaa ttgcaaaact aaaggaacag
    22801 actatgaaaa ttagcgacgg aaactggctg atccagcctg gccttaattt gattcacccg
    22861 gttcaggtgt tcgacgttga acagcacggg aatgagatgg tggtctatgc cgcgccgcgc
    22921 gatgtccgcg aacgaacctg gcaactggat accccgttgt ttaccctgcg ctttttctcg
    22981 ccacaggaag gagtgatagg tgtacggatg gaacacttcc agggcgcttt ggataacggc
    23041 ccacattatc cgctcaatgt cttgcaagat atcaacgtgg agatgcagaa caacgccgaa
    23101 tttgccgaac tcaagagcgg cagcctgagc gtgcgtgtca ccaaaggcga gctctggtca
    23161 ctggattttc tgcgcaacgg tgtacgtatc accggtagcc agttgaagaa taacggctat
    23221 gtgcaggata ccaacagcgg gcgcaactac atgttcgagc gtctggatct cggcgtgggc
    23281 gaaaccgtct acgggctggg cgagcgcttt accgcgctgg tgcgtaacgg tcagacggtg
    23341 gagacctgga accgtgacgg cggcaccagc accgagcaat cgtacaagaa tatcccgttc
    23401 tatatcacca accgtggcta cggtgtgctg gtgaatcatc cgcagtgcgt gtcgtttgaa
    23461 attggctccg agaaagtctc caaagtccag ttcagcgtcg agagcgagta tctggaatac
    23521 ttcgtcatcg acggcccgac tccgaaagac gtgctgaacc gctataccca atttacgggt
    23581 cgtccggcgc tgccgcccgc ctggtcgttt ggcctgtggc tgaccacctc atttaccacc
    23641 aactacgacg aagcgaccgt taaccgcttt atcgacggta tggccgagcg caatctgccg
    23701 ctgcatgtct tccacttcga ctgtttctgg atgaaggcct tccagtggtg cgattttgaa
    23761 tgggacccgg tgactttccc cgatccgaaa gggatgattc accgcctgaa agcgaaaggg
    23821 ctgaaagtct gcgtgtggat taacccctac atcggccaga aatccccggt tttccaggag
    23881 ctgaaagaga aagggtattt acttaaacgc ccggacggct ccttgtggca gtgggataaa
    23941 tggcagccgg gactggcgat ttacgacttc accaacccgc aagcctgcga atggtatgcc
    24001 gacaagctga agggcctggt ggagatggga gtggactgct tcaaaactga cttcggcgaa
    24061 cgcattccaa cggatgtgca gtggtttgat ggttcagatc cacagaaaat gcacaaccat
    24121 tatgcctaca tctacaacga actggtgtgg aacgtgctga aagagaccgt gggcgttgaa
    24181 gaggcggtgt tgttcgcccg ttccgcctcg gtgggcgcgc aacagttccc ggtgcactgg
    24241 ggcggcgact gctacgccaa ttacgaatcg atggcggaaa gcctgcgcgg cgggctgtcc
    24301 atcggcctgt cagggtttgg cttctggagc catgatattg gcggattcga gaataccgcg
    24361 ccggcgcatg tctacaagcg ttggtgcgca ttcggcttgc tctccagcca cagccgcctg
    24421 cacggtagca aatcctaccg ggttccgtgg gcctatgacg acgagtcctg tgacgtggtg
    24481 cgcttcttca ccgaacagaa gtgccggatg atgccgtatc tgtatcggga agcggcgcgc
    24541 gccaacgaag ccggtacgcc aatgatgcgg gcgatgatgc tggagtttcc ggacgatccg
    24601 gcgtgtgatt atcttgatcg ccagtacatg ctgggagatg cggtcatggt agcgccggta
    24661 tttagtgaag cgggcgacgt ggagttctac ctgccagaag gccgctggac gcacttgtgg
    24721 cgcaacgatg aagtgcaggg cagccgctgg cataaacagc agcatgactt cctgagcctg
    24781 ccagtgtacg tgcgtgacaa tacactactg gcgctgggca acaatagcca gaagcccgat
    24841 tacgcctggc atgagggtac ggccttccag ttattccatc tggatgacgg ttgcgaagcg
    24901 gtctgcgaag tccctgctac ggatggttcg acaatcttta cgctgcaggc gaaacgcaca
    24961 ggcaatacca ttacggtgag cggcgaaggc gaggcgcgca actggacgct gtgtctgcgt
    25021 aatattacgc agattagcgg taccaaatgc ggctcatatg cgggaagtga actgggcgta
    25081 gtggtcaccc cgcagggaaa tgaagtggtg attacgcttt aaatctgaat cgccggatgg
    25141 cgccgtgagc tgcgcttatc cggcctacaa atgagcaaga accgtaagcc cggtaagcgc
    25201 cagcgccacc gggcaagccc tcaattacag cgctggctcc gttgacgtaa cttccccgcc
    25261 ggacaccaca cccgcttgca tcgtttgcat tatctgctgc ttttgtgcgt tgaccgcgtg
    25321 taattgcccg tttaccgtcg gtttcaacgg cgcatcggcc tgaatattgc cgctggccgt
    25381 gaactgaata ttgccatcgc cagcaatcgg taatgccggc cagccccact gttgtagcac
    25441 atccattggt acgccgcgtc cgttcaggct gatttgcgtc tgacgctgcg gctgttgtga
    25501 tacgctggca gtggcttcca gtatcccttt ttcagtaaac gcgctcagat cactgatgtt
    25561 gaccgtgctg gcattcgccg tcaacgacag cgacgggcgg cgcacgtcca cacggttaaa
    25621 ggttgccgct gcggcgttga gggtcgcatt gccgctccag acgccccatt gatgatgttg
    25681 taccagctcc aggtttgcgc cgtagccgtc cagagcggtg atttgccacg ggaaggtcgg
    25741 gtcgatatcg atcaccagat tgcggctggc gctgaatttt ttcagcgtca ggctgttcag
    25801 ccagtcgggc aacggcttca tccataactg cttccagttt tccggcagcg tatactccag
    25861 cccggcgata gcggtatcgt ccagaatcag cgctttgctc tcgcgtaacc aggcgccgga
    25921 ggttctgacc ataccgcctt cccagcgggt ggtgaactgg cgtagcgcaa cgccctgtgg
    25981 tgaaaattcg gcgttcagga ttggatcgag caagtgcagc gagccgtaaa taaactcgct
    26041 ggcattcatc gataatttac cttcctgact ttgccagtct tctttgcgca gagtcagatt
    26101 gcgcaaactc aggtcaagat cggtgactgc ccagtctggt ccttgcaggc tggagtccgt
    26161 cacttcaaga cgaccaatct gcaaagatgg aaccgtagta agcggcgcga aaaactcgct
    26221 cagggattta tcgctttgta accggatatc attcagccgc agattttcaa cgacccaact
    26281 accatcagcg ttacgccggg cgacgccggt taacgctccg cgcgccatat cggcgccgac
    26341 ggtgtttaac atcatctgat catggtcaat actgccttca ataagcacat tcgtggcggg
    26401 aacgtcgttt aacgtcagcg aaccggcgct cagttggatc tgggctttat tgcccaatac
    26461 ccgaccggct tcggggcgcc agggcataac gccgccgtta acgcgctggg cgctcaaccg
    26521 ccattcgctg ccgggactat tgagcgccat attgcgaagt tgcaggcggt cggcctcaaa
    26581 cgggaaaggg gcggtttgca ctgaaatatt cagcgtgccg tcctgtaaca gaatcgtgtc
    26641 gacatgcagc ggcgcggtta actggcgaat gctcagaccg atatctacgg ttttcgcgac
    26701 cagggtagca ggctgaccat cacgaccaaa ggtcacattc tccagtaaaa gatgggatgg
    26761 ggcggaaaaa cgatgatcca tcacgtcgaa tgtgaggtga tagccgctgt tctctgatac
    26821 ccagttgctg acatgatctg cgccccagcg cgtttgcagc agaaaataaa agccgaaaat
    26881 caccactaaa caggcgatca gcacgtagag aagcaacctc ccaatcaatt tcatggtctt
    26941 ccatcccgtg aaatgcacat aggggattta tgcacgattt gcgtgcaatc ctcaagacag
    27001 gaatggtgaa agagcgttac agcagcggcg aatcgtgtcg ccgccgcagg gtttttacgg
    27061 tttttccggc gggagaatca ggttcagcac gatagccgtg atgccgccag cggcaattcc
    27121 ggatgagagc agatttttca cccattccgg cgcgaactgc aggatctgcg gctgttgcga
    27181 gacgccaaga cccacggcca gcgacagggc gataatcaga atcgcgcggc ggttcagcgg
    27241 ctcacgcgag acaatacgca ccccggaggc ggcaatggtg ccgaacatca ccaacgtggc
    27301 gccgccgagc accggttccg ggatatgttg cacaaaaccg cttaccgccg ggaacaggcc
    27361 gagcacaatc agcatcagcg cgacgacaaa tcccacatag cgactggcga cgccggtcaa
    27421 ctgaatgacg ccgttgttct gaccgaaaca ggaattcggg aacgtattaa ataccgctga
    27481 aacaaatgag ttcaggccgt tagccagtac gccgcccttt agccgtttca tgtacaaggg
    27541 gccggatacc ggctgctcgg agacatcaga ggtggcggtg atgtctccga tggtctccag
    27601 cgacgtaatc ataaagacca gcatcaacgg cagtaacagg ttccagtcaa tgcccagacc
    27661 ataatacagc ggggtcggca ccatcaggat gtcctgcgag accggcgcgt tattctcagg
    27721 caacatgccc ataaaccagg ccaaaagata gcctgccgcc atggcaataa ccaaagaagc
    27781 cacgcgcagg tagggattac gttgccgatt cagcaggatg ataatggcca ggacgacgcc
    27841 ggccagtaac aggtttttcg gtgcgccaaa ggtgttgtcg ctcatggcgg catagccgcc
    27901 gccgatggaa gttagcccca cctgaatcag cgacaggcca ataatcatta ccacgacgcc
    27961 ggagactaac ggcgtgataa tccggcgcgc cagatgtaga atgcgagaaa gcaccatctc
    28021 ggtgcagctt gccagcatca gcgtgccgaa cagcgccgcc atcatcgtcg ggacatccgc
    28081 gccgccggtt ttcagcgcgg taccgcccat aatcagcggg gcgacaaagt taaaactggt
    28141 tccctggatg gataacagcc ccgatcctac cggcccccac gctttgattt gaataataga
    28201 ggctacgccg gaggcgaaca gcgacatgct gataatgtgc tgagtatcct gcgccggtaa
    28261 acccaacgcc tggcagatta acagcgctgg cgtaattacc gcgacaaaca tggccagcag
    28321 atgctgacaa gcggcaaaaa gggtttgagg gagcggcggg cgatcttcaa gacggtaaat
    28381 taattcgctg ttttgcgtct gcgcaaccgg ttgcgcatct gccggctcga tggcgttaac
    28441 ggacatcagg gacattctcg tggtggaaaa gcggtgattt tatctgacca ggtggtaaaa
    28501 gcaaacgatt gcgagcgaat attcttaata tttaaaaaag ataaatgcac cttttatata
    28561 actttttgcc tttttctgct taaaatccat gccgaagact cgcaaagagc taaaaaactg
    28621 actcaggaaa tgatttgtgc gcacatgtca cagcgcacta caggagcttt aaatgtttga
    28681 actcgatacc ttatcgaccc ttgtcgccgc cacgctggtg ctgctactgg gtcgcaagct
    28741 ggtccagtct gtctccttac tgaagaaata tacgattccg gagccggtgg cgggggggct
    28801 actggtcgcg gttgctctgc tggtgctgaa aaaaagcgtc ggttgggagg tcaactttga
    28861 tatgaccctg cgcgatccgt tgatgctggc gtttttcgcg acgatcggcc ttaacgctaa
    28921 ccttgccagc ctgcgcaagg ggggacgcgt tgttggcgtc ttcctggtcg tcgtggtcgg
    28981 attactgctg atgcagaatg ccatcggtat cggcatggcg agtctgttgg ggctggaccc
    29041 gttaatgggg ctgattgccg ggtcaattac gctgtccggc ggacacggta ccggcgcggc
    29101 gtggagtaaa ctgtttgtcg aacgttatgg ttttgccagt gccaccgaag ttgcgatggc
    29161 atgtgcaacc tttggcctgg tgctgggcgg gttgattggc ggcccggtag cgcgttatct
    29221 ggtgaaacac tccaccacgc cggatggaat gcctgacgat caggccgtgc cgacagcctt
    29281 tgaaaagccg gatgtgggtc gtatgatcac ctctctggtg ctaatcgaaa ctatcgccct
    29341 gattgctatc tgtctgaccg tgggcaaaat cgtagcgcag ctactggcgg gaacggtgct
    29401 tgaactgccg gtcttcgttt gtgtgctatt tgttggggtg atcctcagca atggcctggc
    29461 gctggtgggt ttttatcgcg tatttgagcg tgctgtttcg gtgctgggga acgtgagttt
    29521 gtcactgttc ctagcaatgg cgctgatgag cctgaagctg tgggaactgg cgtcactggc
    29581 gctgccgatg ctggcgattc tggtggtaca gaccatcttc atggcgctgt acgcgatctt
    29641 cgtcacctgg cgcatgatgg ggaaaaacta tgatgcggcg gtgctggcgg cgggtcactg
    29701 tggttttggc ctgggcgcaa cgccgaccgc cattgctaat atgcaggcga ttaccgaccg
    29761 ttttggcccc tcgcatatgg cgttcctggt ggtgccaatg gtcggcgcgt tctttatcga
    29821 tatcgtcaat gcgctggtga ttaagctgta cttgatgtta ccgattttcg cgcaataagg
    29881 gtttgtacgg cggcattaaa gccgccgtgc tcactaggcg ttagaataac gttcggtttc
    29941 cggcatccag cgctcaatca gcgcttgtgc ctgctgcgga taacgttcgt gaatatgacg
    30001 ggcaatacgc tgaacttcgg gaatcatggc ttgatcgcgc agcaaatcag ctactttaaa
    30061 ttcggcgtta cccgtctggc gcgtgcccag taattccccc gggccgcgaa tctctaaatc
    30121 tttttgtgca atcacaaagc cgtcgttgct gtcgcgcaat acctgtaaac gcttctgcgc
    30181 cgttttcgac agcggcgatt tatagagcag cacgcagtgc gatgcgaccg cgccacggcc
    30241 aacgcgccct ctgagctggt gtaattgcgc caggcccagc cgctccgggt tttcaataat
    30301 catcaggctg gcgttaggaa catcgacccc cacctcaatc accgttgtgg cgaccagcag
    30361 atgcagttca ccctgcttaa aggcctgcat caccgcctgt ttttcggcgg gcttcatgcg
    30421 gccgtgtacc aggccgatat tcaactccgg taacgccagc ttgagctcct cccaggtggc
    30481 ttccgccgcc tgcgcttcca gcaggtcgga ctcttcaatc agcgtacaga cccagtaggc
    30541 ctgacggcct tcggttgtgc aggcgttgcg cacacgatca atgatttcat ggcgacgggt
    30601 atccggaatc gcaacggtag tgacaggggt acggcccggc ggtagctcgt caatcaccga
    30661 ggtatcgaga tcggcgtagg cagtcatcgc cagggtgcgc ggtatgggcg ttgcggtcat
    30721 aatcaactga tgcggatgaa agccctgctg ctggcctttt tcccacaatg ccagccgctg
    30781 gtggacgcca aagcggtgct gctcatcgat aatgaccagc gccaggccgt tgaactgcac
    30841 ctgttcctga aagatagcgt gggtgccgac aatcatctgc acctgaccgc tggcaatagc
    30901 ctcttgctgc gcctgacgcg ctttaccttt ttgcttaccc gccagccaac ccacttcaac
    30961 gcccaacggt tcgaaccagt tgcggaaatt atttgcgtgc tgttcagcca gcagttcggt
    31021 cggtgccatc aacgcgacct gcttaccgtg ggcaatagcg cgcaaggcgg caagcgccgc
    31081 aaccagcgtt ttccctgagc cgacgtcgcc ctgaaccaga cgcatcatcg gcacatccag
    31141 cgccatatca cgttcgatct ctgctaccac ccgcgcctgc gcgctggtgg gtttaaacgg
    31201 caacgacgcc agcagcttgt ctttcaatat gttgttggta cttagcggct gagtgtggta
    31261 gcgctgcgcg cctgcgcgaa gcgccagcat actgaggtta tgcgccagta gctcttcaag
    31321 aataagccgc cgctgcgccg ggtgtttgcc ggtttctaaa tcggcgagct ggagtgtcgg
    31381 cggcgggcga tgcaaggtac gtagcgcttc cggcaggctc atcataccct gcgccagttc
    31441 cggcggcagt agttcggcaa tggcgcaggt gtcgagcaac tccagcgcct gatcggtaag
    31501 cttgcgcagt gtcgcttgct tcacgccctc ggtggtcgga tagacggggg tgagcgtttc
    31561 ctgaagttcc ggcgtgctga gatcgccctg caggcgatat tccggatgga tcatctctgc
    31621 gccatacttg ccgcgcttcg cttccccgta ggccagcaca cgccgccccg tcgccaggct
    31681 gtttttcatc gccgcgttaa aattgaaaaa gcgcatggta agaatgccgg aaccgtcgct
    31741 aatctggcag gtcatcatcc ggcgaccgcc gaaagtgata ttgcagttca gcacttcacc
    31801 ttcaacggtg gcgtagatgc caggcagcag ttcgccaatg gggtagagat gggtacggtc
    31861 ttcgtaacgc agaggaagat gtaatagtaa atcctggacg gtatgcaggc caattttcgc
    31921 cagtttactg ctttgcgctg cgccgacgcc tgtcagggaa ttgagcggaa cagcgtctaa
    31981 caagcggcct gacatggtga ttaccctgcc gcctgcatcg tcgcccacca gtcagcatcg
    32041 gcgtcgattt cgccctgctg attgacgcga ggataaggca gacctttacg tttagcgact
    32101 ttcgccagca ccggataacc accctcaaac agcaggcgct gctgttcatc ttccggcaac
    32161 atgctatttt cacgcagata catgcccgcg ttctgtcgct ggcgctgggc ttcataaaga
    32221 atgagcgcgg aggcgacgga aacgttcagc gactgtacca tgccgatcat cggaatgatg
    32281 atgtcccgat ccgccaggtc taatgcttcc tgagtaatac cggttttctc ctgacccatc
    32341 agaatacagg tcgggcgcgt gtaatcaatc tcgcgaaagt ctacggcctt atcagaaaga
    32401 tgggtggcca gaatctgcat tccccgtcct ttcaaatggg ctaccgcatc gtcaatggta
    32461 cggtgagttt tcacctgtac ccaactgttg ctgcccgccg ccgcggaagc catggtgcgc
    32521 atccggctac caggccagat ggcatggact tcatggacgc caacggcatc tgcggtacga
    32581 atgattgcag aaacgttatg aggtttgtgg acttgctcca tgcagaccgt gagatcaggc
    32641 tgacgcctgg cgagcatttc gcatatacgc gcataacgtt ttggattcat agcgctagtt
    32701 tcggttacgg gtgactttaa taacgtctgg catcacgcgg attttgcgca tgatattcgc
    32761 cagatgtacg cgatcgcgtg cggtaaggcg aataaaggta ctatagacgc gaccatcttt
    32821 ttcttcagta ttcaggcttt gaatattgga ggtggtggta ttaatcgccg ccgtcaggtt
    32881 agccagcgcg ccctgatggt taaacatttc caccttgatt tcggtaatga attcctgctc
    32941 cgtctctttg tcccattcga ccgccataaa tttctctggc tctttctggt atccacggat
    33001 attacggcag gattcatggt ggatcaccag tcctttacct gggctgacgt gagcgatgat
    33061 cgggtcgcct gggatcggac gacaacactt cgcaaaggtg ataagcacgc catccgcgcc
    33121 tttaatcggc aggtggccgt gattcgattg cgcaacggtc ggcaccacgg cttcgccttg
    33181 ctgcagattt ttcgcgacca ctacgctcat cgcgttgccg agaccgattt ccgccagcag
    33241 atcgtcaagc gttgccagct tcatacgatc caattcgcgc tgaatatttt cctgcggaat
    33301 ttccgccagc ttacgactgc cgcctaaagc atggttaagc agacgacggc ccaggcttac
    33361 ggagtcatca cgtttgaggt ttttcagcaa ctgacgaatt ttagcgcgcg ctttagagct
    33421 gacgacaaag ttcagccagg cggcgttggg acgcgcgccc ggcgcggtaa taatttcgac
    33481 ggtctgaccg ctgctaagcg gctgtgacag cggataaggc tgccggtcga cacgcgcgcc
    33541 gacgcaggcg tggccgatgt cggtatgcac tgcataggca aaatccaccg gcgtagcgcc
    33601 agcgggcagt tcgacaatgc gcccttccgg ggtgaaaacg taaatctcat ccgggaagag
    33661 atcggatttt acgctttcga taaattcaaa cgaactaccg gcgctctgtt gtagctccag
    33721 caggctctgc atccagcgct gggcgcggat ctgcgccgtg gtgctggtct caccgtgctc
    33781 tttatacgcc cagtgcgccg caacccccat ttccgccatc tgatccatgt cttcggtacg
    33841 gatctggact tcaacaggaa cgccgtgcgg gccgatcatc gaggtgtgca aagactgata
    33901 gccgttcgct ttgggaatgg cgatatagtc tttcacgcgt cccggacgcg gcttatagag
    33961 actgtgcatc tggccgagta cgcgatagca ggtatcggag tcatgaacga tcacgcggaa
    34021 agcgtaaatg tccatgatcg agtgaaaacg ctgctctttg agcaccattt tgcagtagat
    34081 cgagtaaaga tgtttttcgc gaccgctaac gcgacacgga attcccgcct cttgcaaacg
    34141 tccttcgatt tcagagagga ttttttggat catctcttta cggttgccgc gcgccgctct
    34201 taccacttct ttaatgacgc ggtaacgatt gggatacagc gcttcaaaac ccagctcttc
    34261 cagctcggtt ttaatatgat gaatacctaa acggtgcgcc agcgggctgt agatttcgag
    34321 ggtttcacgg gcaatacgac gacgtttatc cgggcgtaac gagcccagcg tgcgcatgtt
    34381 atgggtacgg tcagcaagct taatgaggat gacgcggata tcctgcacca tcgccataat
    34441 cattttgcga aagttttcgg cctgcgcctc tttcttatcg cggaacttga gcttatcaag
    34501 tttcgacacc ccctctacca gctcggcaac gcttttaccg aaaagctgtt ccatgtcctg
    34561 ataggtggcg ggggtatctt caatcacgtc atgcagcaga gcggccatca gcgtttcgta
    34621 gtcgagtttc atctcggcca gaatacaggc caccgctacc gggtgcgtga tatagggttc
    34681 accgcttgaa cgtgtctggc cctcgtgagc gtcacgtgca acgagatacg cctgccgaag
    34741 acgcttaatc tggtcttccg gcaggtaggt ttgaatcagt tgattcaggc tttcaaacag
    34801 atacaagggc gacccgcttt gtgattaacg acgaccttca gcaatagcgg taacggcttg
    34861 taattcagcg gcttcctgct cttgctgttc ctggcgctcg cggacgtcga ggatctggtt
    34921 gttaatcaga ccttcttcga tttcgcgcag cgcgataacg gtagttttat cgttttcttc
    34981 cggtaccagc ggatcctttc cgcctacctg catctgacga gcgcgacgcg cggcgaccag
    35041 taccaggtca aaacggttac caattttctc tacagcgtcc tgaacagtta cgcgtgccat
    35101 acttaaaatg ctccacaggt gaagaaatga ctgggcatga tactgaaagt gggttcagtc
    35161 tgccaacaat ttgctgatta aagcgtcatg acgctgcttt tggcggctca tacgcagacg
    35221 ttcagcgcga atgatggttt tcaagtcgct taacgcggta tcaaagtcgt cattcacaat
    35281 aagataatca tattcggcgt aatggctcat ttctgcaacc gcttgcgcca ttcgtttggc
    35341 aatgacttct tcgctatctt gcccgcggcc gcgtaaacgg cgatccaatt cgatctttga
    35401 tggcggcaaa ataaaaatgc tgcgtgcttg cggcatcttt tcgcgaattt gctgggcgcc
    35461 ctgccagtcg atatccagaa aaacatcaac gccagttgcc agcacttgct caatggtttc
    35521 gcgcgaagtg ccgtagtaat tgccaaacac ttccgcgtgc tccagaaacg cctccctgcc
    35581 aatcatggtt ttaaactcat catgatttac aaagaaatag tgctcaccgt gcacttcacc
    35641 cggacgcggc gcgcgcgtgg tatgtgaaac ggaaacctga gtgtcgtaca acggttgggt
    35701 ttttaataaa gcctgaatca ggctggattt acccgcgcca ctgggggcag aaacaatata
    35761 aagcgtacct tgagccatga gtatcttacg tctgtgatta tcgaaataga gccttgatac
    35821 gggcttatta tacacatcgc cgttatgcga cgtagtcttt gtcacacttt ttgcgccaga
    35881 ttattgcatt ttgcgtccct ttttccgctt ttatcgcgtc gttgcagcaa cccaccaaaa
    35941 aatctggaaa gcggctcgga tggtgcattt ttacctgtcg gtttttattc actaaagcgc
    36001 tatacctgcc gggcaatgtg cgcaggaggt tgtgatgaga ttatggaaaa gtatggcgtg
    36061 gggaatttta ttgtggcatt cgcagagtgg ggcgctttgc ccggcctggc cgccagcaag
    36121 ggccgctgaa gaaatcaccc gtttacagca acagctcgct gactggaatg acatctactg
    36181 gaaacaaggt gttagcgcgg ttgacgatag tgtgtacgac caactcagcg caaggctggt
    36241 tcagtggcaa cgctgtgttg gtcaggatgt ttcatctact ccggtttcac cgccgttaaa
    36301 cggtacaaca atgcaccctg ttgcgcacac gggcgtacgt aaactcgcgg accgacaggc
    36361 gtagaacagt ggatgcgcgg gcgcagcgag ctttgggtac agccaaaagt ggatggcgta
    36421 gcggtaacgc tggtttatca aaacggtaaa ctgaccaggg ccattagccg gggtaacgga
    36481 ctacaaggcg aggactggac gccaaaaatt cgcctgatcc cctctatacc gcagacaaca
    36541 caaggcgcgc tagctaacgc ggtgttgcag ggcgaaatct ttctacagcg cgagggacat
    36601 atccagcaac ggatgggcgg gatgaatgcg cgctcgaaag ccgcaggaat gttaatgcgc
    36661 caggataacg cctccgcgct aaattcgttg ggtattttta tttgggcgtg gccggacggt
    36721 ccggcaaata tgcccgaaag attaagccaa cttgctaagg ctggattcag tctgacgaag
    36781 aaatattctc tggcggtaaa agatgccagc gaggtcgagc gggcgcgcca gtcatggctg
    36841 acgtcagcat taccctttgt gacggatggc gtagtgatac gcatggctaa agaacccgcg
    36901 tcacaatact ggcgacccgg gcagggcgac tggctggcag catggaaata tccgccagta
    36961 gcgcaggtcg cgcaagtgag cgctattcag ttctcggtgg ggaaaagcgg caagattacc
    37021 gtagtagcgt cgcttgtccc cgttatattg gatgataagc gggttcagcg ggtcaatatc
    37081 ggttctgtga agcgttggga agcgtgggat attgcgccgg gcgatcagat cctggtgagt
    37141 ctggccgggc aaggcattcc tcggcttgat gaggtcgtct ggcggagtcg tgagcggagt
    37201 aagcctgtgc cgccaggtag ccatttcaac tcgctgacct gcttttacgc gtcggcaacg
    37261 tgtcaggaac agtttatctc caggctggta tggctggggt cacggtcggc gttgggtctg
    37321 gacggaatgg gtgaagctag ctggcgggct ttgcatcaga cgcatcgctt tgagcatatc
    37381 ttctcctggc ttgccctgac gtcagcgcaa atagccaaca cgccaggcgt tgctaaagga
    37441 aaaagcgagc agatatggcg gcaatttaac ctggcgcgcc ggcagtcatt tacccgctgg
    37501 atcatggcga tggatatccc cttaacgcag gccgcattac aggccagcgg tgatcgctca
    37561 tgggagcagt tattaatgcg aacagagcaa cactggcggc aattgccagc gacgggcgag
    37621 cgccgtgccg ggagagttat cgactggcgg aataatccgc agatcaacgc gctgagcaga
    37681 tggctggcta ctcagcatat tcccggattt gggtcttagt gtccttcatg acggtaataa
    37741 aataccggca ggccaagttt aagacgtagc gctaataacc ttgctgtaaa gccaaacagt
    37801 agcgtagaga taacgacgac atccggattc atgacgtaat gttgtagcgc aatatagagc
    37861 accgccgagg cgaacgaaat gccggcatac agctcttttt gaaacaccag tggaatgcgt
    37921 ttgcagaaca tatcgcggag cacgccgcca aagacgccgg tagtggcggc ggctaccacg
    37981 gcgataattg gcccttcgcc catatcaagg gctatctgag cgccaataat agagaaaacc
    38041 accaacccca gcgcgtcaag taccaggaaa agcttgcgta aatagggcat gacgggagca
    38101 acaatggtgg tcaatacggc ggcagtcgcc acaataatga catattcggg atgcttcacc
    38161 caacccagcg gatagtgacc gagcagaatg tcgcgaaccg agcctccacc aatggcggtg
    38221 gcggtagcaa taataattac gccgaatgta tccatgcgac gacgacccgc agcgagtgcg
    38281 cccgtcatgg cctcggcagt gatgccaatt aaataaagaa cgtgcaacag catgatttcc
    38341 ccctaattta ctgggggcga agattaacga tttgtgcgct gtatcacgat tgagattttc
    38401 taaggcatta cacgattaat aaattttagt aatgattcta aatttatgat taataattat
    38461 ttattataaa tatcaataaa ttgaacatca tttttgtggt ttattgtata cgaggttttt
    38521 ctgttttgac ttagataaat tacctgaacg gcgccctgga cgcgccgccg gtgagtcatt
    38581 tcattgtggc tgctgtgcgg taagttgtgt gatgaagcgc tgacgcgagc gttccacata
    38641 ctgttgcaag ccattggaat caaagaatgc ctgtgtatcg ccgttgcgaa gttgctgtcg
    38701 tttctccagt agcccgaagc ggtcaccttt gttggcaata aagatatcaa catgctgggc
    38761 ggccagtgtt ttaaagctgc tctgaatatc agtaaccagg tcagggtaat ttttgttgtt
    38821 aatcagcaga tagtcaggtg tggcgagact atctgcgtaa attagcgtct tgccgttgcg
    38881 gagcgttacg cgccaggagg ttgagccggg cagatgtcca ggcgtgaata gtgctgtcac
    38941 ggttacccct ccgaggctga tgctttcctg gttgtggata attttatcag tggtgacgag
    39001 cgggaagggg agcgcatcgc caagcgcaaa atcctgtcgt ccacccctcg ccatctgatc
    39061 ggcgttgggt tgactggcga ccaattgtgc gccgctccac gctttcaaac gtgccatgcc
    39121 ccccgcttga tccagccgcg catggctgct caacagatag cgcacgtcag tgaagcgaaa
    39181 tcctgccgct tcaatattcg ctttaatttg cggtgcgctt tcatccagcc ccgcatcaat
    39241 aagaatatgc cctgccggag tggtcagcag aatagaagag agattttccg taccgacata
    39301 ccacacgcct tctgtgattt gaaacggctt cataggctta gcccacgctt taaacagtga
    39361 taacggaggc gcgggtgata acggttgtga aggatctaat gccgccatgg caggaagtgc
    39421 tgatgttgaa aatatacata caaagaataa tacatagcga ttcataatgt tctcctgatt
    39481 gaagcgcccg cagtatacct ggcagtaatt tagtcaggtt caataagaga gacgtttaat
    39541 gaacttgctg caaatggata tgaacctgtt aaaagtactg tatgtgctgc tggagacgag
    39601 ctctacgggg aaaacggcgc aaaagctggc tttgtcgcct tctgcggtga gtcatgcgct
    39661 aatgagattg cgcgatgcgc taaacgatcc gttgtttcga cgggagggga accgccagat
    39721 tgctacgcct tatgcgcagg cgctgcgtga caagttggcg cctgtgtttg tttcgcttaa
    39781 tgaggagctg tttggcgata aagagaacgg ctcccgttgt ttccgggtgg tacttcctcc
    39841 cgcattgaac gcgctgctta cgcccgttct cgcagagaaa ggtcatcttc atcaggcggt
    39901 gatcgagtgc cttccttttg cccgccgacc ctggcgtgat gaactgttgg atagctcggt
    39961 tgatttggtg ctggcaattg gcgaccatca aaagcaggtc agcgctctgc attacgagcg
    40021 ggtggggacg acgcgtttga tcgcggttta tggcgcgcca ttgcgttcac gtctggagaa
    40081 tgccgcagcg ttgaattttg ctgatctgca gcattatcaa cacatttact gtttgccgtg
    40141 gacaaaagag aacaacgaac tggacaggca gcaggctcgt gccgggtttg aacgtccgtt
    40201 ggcgtttgtt tgtcatgatt acagtcaact tgcgcctgct gtccagtcgg cgccgctaat
    40261 ggcgattgta ccgcgcccct ggtatgaaaa tttatccgat aagcgcggtc tttttgtcct
    40321 gccgcttgcc ggggagcagg cggaaggcgc tatttttatg cagtatcggg cttcgacggt
    40381 agagtggaag cgacgcctta tcgacgctat tcgccggaaa ttaaaaacgt actaccgata
    40441 aacgcgagag cccgcataag gcggactctg tgacatattg agcgccagaa ttattcaata
    40501 ttctggatct gctcgcgcat ttgctcgatc aacactttta attcaatagc ggagttagtt
    40561 acatcagcgt tgatggattt agaggccagg gtgttcgact cacggttaaa ttcttgcatc
    40621 atgaagtcca gacggcgacc taccgcctct tttttcttca gaatgttgta agtctctttg
    40681 acgtgcgctt cgagacgatc cagctcttcc gccacatcaa tgcgctgcgc catcatcacc
    40741 agctcttgct ccagacggtt gttttccaac tgaacctgag catcttccag cttcgcgacc
    40801 aggcgttcac gctgccattg caggatttcc ggcatatgcg cgcggacttt cgctacttcg
    40861 gcgctgacgc cttccagacg ttgttcaatc agcgctttca gcgcctggcc ttccgtttcg
    40921 cgcgcgacga taaagtcatc cagcgtaccg tccagtgcgg ctaaaatttc tgcggcaatc
    40981 gcgtccagat cctgctcttg cgccgccatg acacctggcc agcgcaaaat atcaaccgga
    41041 ttgatttccc cttcgtcgct ctgcattttg acccagtttg cggcgctaac taattgtttc
    41101 gcgagctttt cattcagaat aagctcgcct tgcgcgctgg catcgggttc aaaacgcagc
    41161 atacattcga ctttgccgcg cgtcaggcgt gtacgaatgc gttcgcgcac gacgggttca
    41221 agactacgga actgttccgg cagacgaaag taagtttcca gataacgctg gtttaccgag
    41281 cgcatttccc aggtcgcgct accccattca cccttgattt cacgccgggc gtaggcggtc
    41341 atactgcgga tcatagatgt tcccgttttt aaaggagaga tgaggggatt atagctatcc
    41401 atgccttgtc aggataggaa taaccatcgg aagtccgtat aatgcgcagc cacattcgtt
    41461 ttaagccgga gatctcaata tgcgtccagc aggccgtagc gctaatcagg tgcgtcccgt
    41521 aaccctgacc cgtaactata caaaacacgc tgaaggctcg gtactggtcg aatttggaga
    41581 taccaaagtg ttgtgcactg cctccattga agaaggcgtt ccacgttttc tgaaaggaca
    41641 aggccagggg tggatcaccg cagagtatgg catgttacct cgcgctaccc atacccgtaa
    41701 tgcgcgcgaa gcggcaaagg gtaagcaggg cggtcgtact atggaaattc agcgtttgat
    41761 cgcgcgtgcg ctgcgtgcgg cggtcgatct gaaaacgctc ggcgaattta ccattacgct
    41821 ggactgcgat gtaatccagg cagatggcgg tacgcgtaca gcgtctatta ccggtgcctg
    41881 cgtggcgttg gcggatgcgc tgaataaatt ggttgccaac ggtaagctga aaaccaatcc
    41941 gatgaaaggc atggtggcgg cggtttccgt aggcatcgtt aacggcgaag cgatctgcga
    42001 tctggaatat gttgaagatt ccgccgcaga aaccgacatg aacgtcgtga tgactgaaga
    42061 cggccgcatt attgaagttc agggtaccgc ggaaggcgag ccgttcagcc atgaagaact
    42121 tctcactttg ttggcgctgg cccgaggggg aattgaatcc attgtggcga cgcagaaggc
    42181 ggcgttagaa aattgatttt aaggcgactg aaaagtcgcc ttttttttgt ccgtaaattt
    42241 cgtaaatgat gaaagtaaga aaaggagcga atccatgaaa ccgtatcagc gccagtttat
    42301 tgagtttgcg cttaacaagc aggtactaaa gtttggcgag tttacgctga aatccgggcg
    42361 caaaagcccc tatttcttca acgccgggct gtttaatacc gggcgcgacc tggcgttgtt
    42421 aggccgtttt tatgccgaag cgctggtgga ttccggtatt gaatttgatc tgctgtttgg
    42481 ccccgcgtac aaaggtattc cgatcgcgac gacgacggcg gttgcgctgg cggaacatca
    42541 cgataaagac ctgccgtact gctttaaccg caaagaggca aaagatcatg gcgaaggcgg
    42601 gagtctggtg ggcagcgcgc tacagggccg cgtgatgctg gtggatgacg tgattaccgc
    42661 aggtacggcg attcgcgagt cgatggagat tattcaggcg cacagggcta cactggctgg
    42721 cgtactgatt tcgctggatc gtcaggaacg tggccgcggc gagatttccg cgattcagga
    42781 agtggagcgc gactatggtt gtaaggttat ctccatcatt acgctgaaag acctgattgc
    42841 ctatctggaa gaaaaacctg atatggctga gcatctggcg gctgtgcgag cataccggga
    42901 agaatttggc gtgtaagcga attgcccggt ggcgctttac cgggcctata tttctgtcgc
    42961 ctggataagg cgtgagccac tatccagtca gcgttactgc aactgcgcgg caatgagcgg
    43021 ccagcgggcg tcgaaatcgt ccgttgggcg gtatttaaat tcgctacgca cgaaccgtga
    43081 aagcatacct tcacagaagg ctaacagctg gcttgccagc agatttttat ccgtcgtgta
    43141 gccttcgcct tcacgcattc ttttttctcg tagcacctgg cggagctgcg cttcgatgcg
    43201 ttcaaaaagc tgattaatgc gcccctgcag gcgatcctgt tcaaacatca gcgcatgccc
    43261 ggtaagaatg cgcgtcaggc cagggttgcg ttcgccaaaa cccagaatca gtaacacaat
    43321 caggcgcaaa cgcgtgctgg tgtctttttc atcttttaaa atcagattga tacgggtaat
    43381 cagactatct tcgataaact caatcaggct atcgaacatg cgggtcttgc tgggaaaatg
    43441 gcggtatagc gccgcttcgg aaacgccgac cgaggccgcc agttttgccg tcgtgatgcg
    43501 ttggcttcca tcgctggatt caagcatcag cgccagtgac tgaagtattt cttcgcgacg
    43561 attccttttc gcagtttgtt tttctgccat gttacaaaat acccctgaaa ataagcactt
    43621 gccaggcgag cacccacgct ataaccgcaa actcagcgct tgcggcagta ttatgacgtt
    43681 atggggatgc gtaaaattta cttacggcca gaatgaccga agccgccctc gccacgttcg
    43741 gtggcgtcaa atgcttccac cagattaaat tcggcctgaa cgaccggaac aaacaccatt
    43801 tgcgcgatac gttcgcccgg ttcaatggta aaactgtcct gaccacggtt ccagatcgaa
    43861 accatcagtt gcccctgata atcggaatca atcagcccga ccaggttgcc cagcacgata
    43921 ccatgtttat ggcccaggcc agaacgcggc aacatgactg ccgccaatga tggatcggcg
    43981 atatgaatgg ccagtccggt aggcaccaac gtcgttgcgc caggcgccag ttctacggcg
    44041 tcgtcgagac aggcgcgcag gtcaagcccg gcagaaccag aagtagcata agtcggcagc
    44101 ggaaactgct gaccaacacg cgggtccaga atcttaacgt cgattttttt catcataacg
    44161 ggtcacgatc tcgtcgagta ataattggcc caggagttct tttcgctcaa gcggtaagac
    44221 tttatctcca tcctgccaga aaaggtgtaa agcgttttta tcgctattaa atccctgatt
    44281 tgaaagagaa acatcatttg cacaaatcag gtcaaggttc ttacgggtac gtttttgccg
    44341 ggcgtattct tccacattat tcgtttccgc ggcaaaccca acaacgtagg ggcgattgtc
    44401 actgagtgcg gccaccccgg cgacaatgtc cgggtttttg accattttta ttattaattc
    44461 atcactttgc gccgcctgtt ttttgatttt ttcactggca atagtctctg cgcgatagtc
    44521 agccacggcg gcgcagctaa tgaaaatatg ctgctgttga acggcggcct gaacagcggc
    44581 ttccatgtcc agcgcggtta tgacatcaac ccgttttaca aaaggcggca tcggtaacga
    44641 aacgggaccg gagaccagcg tgacatttgc gccgcgacgc gctgcggccg ccgcaatagc
    44701 gaagcccatt ttaccggagc tgtagttgga aatataacgc accgggtcga gcggttcgcg
    44761 cgtcgggcct gccgtaatca tgatattaag atgtcgcaga tcgttgacgg cagcgaaatg
    44821 cgcggcggcc ttatcaacga tagctaatgg gtccagcatt cggcctgggc ctacatcgcc
    44881 gcacgcctga ctgccgctat ccggccccca aatgaacagg ccgcgagagg cgagcacctc
    44941 cagattatgt tgcgtggcgg cagcgcggta catctgttgg ttcatggccg gaagaacggc
    45001 caccggggct ggcgtcgcca ggcagatggt ggagactaaa tcattagcca tacccgatgc
    45061 tacacgggcg atcagatcgg cggtcgcggg ggcaagaatc accaggtcgg cccatttccc
    45121 caactcgata tgccccatcg cagcttcggc ggcagggtca agcagactgt cggatacggg
    45181 atagcccgac acggcctgta agctcagggg ggtaataaag gcttttgccg cctcggtcat
    45241 tgccacgcgc acgtcagcgc cgcgctcacg taaacggcgc accagctccg gcgttttata
    45301 cgcagcgata ccgccgctaa cgccgagaac aattttttta ccggccaggc tcatcatgtc
    45361 tttcctgttg ggtgactttg aaaggcggct attttatcac aatctctacg gcgtcgtgtc
    45421 tttgcctgcg ctccactttg cgaggcgcta cgcaagaaca aaatcggggc gtcgatctct
    45481 cccaaaggct gtgccactat gccgcttcct taaaaaagga ggtgcgcgta tggatacgtt
    45541 ggacgaatta ttgccgcgtg aaaaaatgct cagatccggc attgcttccc tcagcgacgt
    45601 ggaactgctg gcgctttttt tacgtaccgg cacgccggga aaagatgtta tgacgttggc
    45661 aaaagagata ttgcagcact ttgggtcgct gtatggcctg ctgtcggcgg actttgcgca
    45721 gtttcgcggc gtaaacggca tcggcctggc gaaattcgcg cagttgaaag gcattgctga
    45781 gctggcaagg cgctattaca gcgtgcgcat gaatgaggaa agtgcgttgc tgagtccgga
    45841 aatgacgcgg gaatttctgc aaagccaact gacgggcgaa gagcgtgaga tctttctggt
    45901 gatcttccta gatgcccagc accgggtgct tcagcacagc cgcctgtttt ccggcacgct
    45961 taaccacgta gaggtgcatc cgcgtgagat tgttcgggaa gcgattaaac tcaatgcttc
    46021 agcggtcatt ctggcgcata atcacccttc aggctgcgca gagccaagta aagcagataa
    46081 acttatcact gagcgcgtga taaagtgttg ccagtttatg gatatccggg tgctcgatca
    46141 cctgataatt gggcgcggag agtacgtttc ttttgccgaa cgcggctgga tttaagattc
    46201 tttgcgcgat ccatcgggat ctttgtctgt tcgggacttg agcatatcgc cgggtcagcg
    46261 tatactacgc cacctttgag aatctcgggt ttggcatttg ggcctggcaa tcgagagttc
    46321 aatagaactg cgcgatgacc aggctgtaaa gcctgacgag gcgccgatac cccatacgaa
    46381 gctcgagcta atttgatttt tggagaatag acatgtcccg agtctgccaa gttactggca
    46441 agcgtccggt gaccggtaac aaccgttccc acgcactgaa cgcgactaaa cgccgtttcc
    46501 tgcctaacct gcactctcac cgtttctggg ttgagagcga gaagcgtttt gtcaccctgc
    46561 gtgtatctgc taaaggtatg cgtatcatcg ataaaaaagg catcgaaaca gttctgtctg
    46621 aactgcgtgc ccgtggcgaa aagtactaag tactaagagg aaataaatca tggctaaagg
    46681 tattcgtgag aaaatcaagc tggtttcttc tgctggtact ggtcacttct ataccactac
    46741 gaagaacaaa cgtactaagc cggaaaaact ggaactgaaa aaattcgatc cagttgtccg
    46801 tcagcacgtg atctacaaag aagcgaaaat caaataattc tcgctttgat gtaacaaaaa
    46861 cctcgcttcg gcggggtttt ttgttttctg gccgtcccca tattaatgag acctgccaca
    46921 cagccggaga cgttatgcct gaattacccg aagttgaaac cagccgccgg ggtattgaac
    46981 ctcatttagt tggcgctact atcctgcacg cccatatccg taacggtcgt ctgcgctggc
    47041 cggtttcaga cgaaatttat cgtctgagcg acacacccgt ccttagcgtt cagcgtcgtg
    47101 ctaaatatct actgctggag ttgcctgacg gctggataat tattcacctg gggatgtcgg
    47161 gaagcttgcg gatactgtcg gaagcgctgc cggcggaaaa gcacgaccat gtcgatttgg
    47221 tgatgagcaa tggcaaaatt ctacgttata ccgatcctcg ccgctttggc gcctggttat
    47281 ggaccaaaga gctggaagga cataacgtac tggcgcatct gggaccggag ccgctaagcg
    47341 atgagtttaa tggcgaatat ttgcaacaga aatgcgcgaa gaagaagacg gcgattaaac
    47401 cctggctgat ggataacaag ctggtggtcg gcgtggggaa tatctacgcc agcgagtcgc
    47461 tgtttgccgc tggtattcac cctgaccgcc tggcgtcgtc actctcgaca gaggagtgcg
    47521 acctgctggc gcgggtgatt aaagccgttt tgctgcgctc tattgaacaa ggcgggacaa
    47581 cgctgaagga ttttctgcaa agcgatggga agccgggcta ttttgcccag gagttgcagg
    47641 tgtacgggcg caaaggcgag ccgtgtcggg tatgcggtac gccgatagtc gcaacgaaac
    47701 acgcacagcg cgcgacgttc tattgccgtc actgtcagaa gtaaaatgcc aggcccggca
    47761 aggaaggaaa cttatttcaa cttatccatt agcgcctgat gcacattgtc gggcagaaag
    47821 tgggtcacat cgccctgatg gcgcgccact tctttgacca gcgacgatga aataaacgac
    47881 cactctttgg acggcatcag gaaaacgctt tccagttgcg gcatcagatg gcgattcata
    47941 tgcgccaact gcatttcata ttcaaaatcc gccaccgcgc gcagaccacg aatcaggata
    48001 ttcgcctgtc tgtcgcgggc gaaattggcc atcaggtcgc taaaacccac cacctctacg
    48061 ttacccaggt gtgcggtcgc tttttgcgcc agcgccacac gttcgttcag ggtgaacatg
    48121 ggtttcttgc cggggctggc ggcgatggcc agaatgacat ggtcgaacat ctgcgttgcg
    48181 cgcgtcacaa tatcgagatg accgttagta atcggatcaa acgtgcctgg ataaatcgcc
    48241 cgtttttgca tgacagccct caatgcgttt tcggtggcag ataaggttcc agcagttgca
    48301 gcagacgctg gagcgcgccc tgattttgat acagcacttc aactgcgtga cgtccgtaga
    48361 aattacgata atcagcgtcg gtcagtaaag aggaaacttc ttttgccagc gtagccgcat
    48421 cggtaatcgt gataagcccg ctcgcctgct ccagacgggc gcaaatatct ttaaagttaa
    48481 aggtatgcgg acccatcagt accggaatcg catgagcggc ggcttccagc gggttgtgac
    48541 cgccgcgttc aaccagcgaa ccaccaacaa aggcgagatc ggcaatgcca tagagcaaca
    48601 ttaattcgcc catggtatcg cctaccacga cctgggtgct ggcggacggc acttcgcccg
    48661 aagagcgagt gatgtagctt aaccctgcct gacgcacaag attgatagca tccgggaaac
    48721 gctccggatg gcggggcacc agaatcagta ataaattcgg gaattgatgt aataacgcct
    48781 ggtgagcggc gataacgata ctctcttcgc catcgtgggt gctggtggca atccagaccg
    48841 gacggtgcgg cgcccactgg ctacgtagcg taacggcttt agccgccagt tgcggtgtaa
    48901 ctgaaatatc aaatttcaga ctgccggtga ccgtgacctg attgttcttc gcgcccaatg
    48961 ccacaaagcg ttcgccatct tcttcgtttt gcgcggcaat cagggtgata cggcgcagga
    49021 gcgtacggac aaacttgcca agcttcgcat aacccgcggc ggagcgggcg gaaagccgcg
    49081 cattagcgat aaccagcgga atatgacgtt tgtgcagcgc agcaatcaga tttggccaga
    49141 gctcagtctc catgatcaat accagcttag gatcaatctt attgaggaaa cgattgagcg
    49201 catcgggcaa atcataaggt aagtaaacgt gctgaacatc gttgccaaag gcggactgga
    49261 cgcgctccga gccggtcggc gtcatggtcg ttacggtaat aggcagatcg ggatagcgat
    49321 gacgtagagc gcggaccaat gggatggccg ccagagtttc gcccaccgag acggaatgca
    49381 gcatgattcc gcccggtttc aacggacggc ggtagaatcc gtagcgttca ccccagcgct
    49441 tacgataggc cggcgcttta cgtccacgca cccaaagccg tatccagatc agaggctgaa
    49501 taaggtagag aagagcggtg taaagcaatt cgagcatagt aaatagctga cttatggatg
    49561 tgctggggat tctatgtatt tagcctgggc tttaccatta cttttcccat ttttgcgcca
    49621 aattggctca gaagggagga ttccaggcgc tgaaccccat tatttttgca tttttacgca
    49681 atccattgaa atttgccgcc cttgtcgccc cagacaatgg gaatgaccat tcacaagagg
    49741 gggataaatt attatctctt tgaatttata attaaaaaaa tgattgtgta taaaaattat
    49801 tcgtatcgga ttgctgcgaa agaagtgtta cactagcgca tctaaaatga gtgcggtatt
    49861 agccatcggg ttgctgtgaa gcctggggcg gtagcgtgct tttttctgct tatttatccg
    49921 gacaatttca accaaagagt cgcttgtgga aaagccattt cgaagaattc tgattataaa
    49981 aatgcgtttt catggagaca tgttacttac cactcctgtc atcagcacgc tgaagcagaa
    50041 ttatcccgat gcaaaaatcg atgtgcttct ttaccagaac accataccga tattgtcgga
    50101 aaatccggag attaatgcac tctacggcat cagtaacaaa ggcgcaggaa caaaagagaa
    50161 gatcaaaaac gcgctatcgt taatcaaaaa attgcgtgct aactcgtatg atctggtcgt
    50221 caatctcacc gatcagtgga gcgtggcgct tattgtgcgt tttttaaacg caaaaataaa
    50281 aatctcgcaa gatttcggta atcgtcagtc tgctttatgg aaaaaaagct ttacacattt
    50341 agtaccttat gcgggagaac atgctgttga gcgcacatta tccgcgctaa agccgttagc
    50401 gctaaaacag tatgtcacgg aaaccaccat gagctatcgc ccggaacatt gggaaaacat
    50461 gcgacaacag ctcaaacaac ttggtgtgac ccgacaatat gttgttattc agcctacggc
    50521 acggcagcta tttaagtgct gggataatga taaattctcg caggttattg atgccgtgca
    50581 gcgccgcggt tatcaagttg tactgacgtc aggcccggcc gcagacgaga tggcctgcgt
    50641 ggatgctatt gcatgcggct gtgagacaaa accggttact ggtctggcgg gtaaaactcg
    50701 ctttcctgaa ttgggcgcat tgattgacca tgcggatctc tttatcggcg ttgattcggc
    50761 ccccggtcat attgccgcag cagtcaaaac gccggtcatt tgtctttttg gcgcgacgga
    50821 tcatgtattc tggcgtccct ggaccgacga catcattcag ttttgggcag gaaattatca
    50881 gccgatgcct gaacggcatg agcttgatcg taataaaaaa tacctttccg tgattccggc
    50941 tgaagatgtt atcgccgcga cggaaaaaat gctgccgcat gaggcacgcc ccatagattt
    51001 ggacagcctg ctatgagagt tgccttttgc ttatataaat attttccttt tggcggtctg
    51061 cagcgtgatt ttatgcatat tgctcaaacc gtggcggcgc gaggtcatca ggttcgtgtt
    51121 tatactcagt catgggaagg ggaatgcccg gataactttg aattaatccg cgtgccggtt
    51181 aaatcccgga cgaaccacgg tcgtaacgca gaatattatg cctgggtgca acaccatttg
    51241 cgcgaccatc ctgtcgatcg ggtggttggg ttcaataaga tgccaggcct tgatgtgtat
    51301 tacgccgcag acgtgtgtta cgccgaaaaa gtcgcacagg aaaaaggatt tttctatcgc
    51361 ctgacatcac gctatcggca ttatgctgct tttgaacgcg ccacgtttga acacggcaag
    51421 cagacgcaac tattaatgct gacgaataag cagattgctg acttccaaaa acattatcag
    51481 actgaagcgg agcgttttca tattcttcct ccggggattt acccggatag aaaatatagc
    51541 caacagatcc cgaacagtcg tcaaatttat cgtcagaaaa atggtatctc agaacagcaa
    51601 aaattactgt tgcaagtagg gtctgacttt acccgtaaag gtgtggatcg ctctattgaa
    51661 gcgctggcat cgctacccga atctttacgg caaaatacgg tgctctgtgt tgtcgggcag
    51721 gataagccga agaagtttgc agcactggct gaaagaagcg gcgtcggcac gaatgtgcat
    51781 tttttctccg gacgtaatga tattgcggag ttaatggcgg cagccgacct tttactgcat
    51841 ccagcctatc aggaagctgc tggtattgtt ttgctggaag ccattactgc tggtttgccg
    51901 gtgttgacaa ccgcggtgtg cggttatgca cattatattg tggatgcaaa ctgtggcgaa
    51961 gcgatgacgg aacctttccg ccaggatgcg ctaaatgagg ttttactcag agcgctgaca
    52021 cagccttcct tacgcagcgc ctgggctgaa aatgcgcggt attatgctga tacccaggat
    52081 ttatacagct taccggagaa ggccgcagat attatcacag gtgatttaga tggttgagct
    52141 gaaagcgccg ttaaccacac tatggcgcgg taaagatgct tttgaggaag tgaaaacgtt
    52201 acagggcgaa gtgttcagag aactggagat gcgtcgaaca ttgcggtttg agctggacgg
    52261 caaaagctac ttcctgaagt ggcataaagg cacttcgctg aaagaaattg tgaagaacct
    52321 gatttcgtta cgtatgcctg ttctgggcgc tgacagagaa tggcacgcca ttcatcgtct
    52381 acatgagctg ggcgttgata cgatgcacgg cgttggtttt ggtgaaaaag gcgtaaaccc
    52441 gctaaccaga acatcattta ttatcaccga agatttaacg cctaccatta gccttgaaga
    52501 ctactgtgtt gactgggctg ttaatccacc ggacgcgcag gtgaagtgga tgattattaa
    52561 gcgtgttgcg actatggtac gtaaaatgca cgccggggga attaaccatc gcgactgtta
    52621 tatttgccac tttcttctgc atttaccttt cactggtcgc gaagaggatt taaaaatctc
    52681 cgtaatcgac ctgcatcgcg cgcagatacg tcagcacgtt ccccttcgct ggcgtgacaa
    52741 agatttaatt gggctttatt tttcttcaat gaatattggc ctgactcagc gagatatatt
    52801 ccggtttatg cgtgagtatt tctcactccc cctgcgagag attttgcaaa aagactcggg
    52861 gttgattcat caggcggatg ttaaagccgc tcgaattaaa gaaagaacaa taagaaaaaa
    52921 tctttaaatt attatactga cttattattt gatttggact acatgtcatg aaagtattaa
    52981 ttataaatga tacaggtaac tcttatcatt ggggatgtta tggaacatcg actgcgataa
    53041 aagaaagttt aaggtttcgt ggtattaatg aaatagtcac tttctcgtgc gaagaaggta
    53101 gtaagataga aaactcaccc aaaaaaattc tgcttgtgta cagtaagaat aagttaataa
    53161 ggaggttagc tagccattat tatagcaaac atcttcgcag gaaattacct gatttatggg
    53221 attcattatt aaaaagtgat tgcgttataa taaatggtga aggaactatt aatagtattc
    53281 atacggcaac aagatttata ttttttataa ttcacgttgc aaaagatata cttaaaaaaa
    53341 ggtttatcta ataaatcact cttgttatcc taaattgggt aatgagaaac aaatttatta
    53401 ttataagtgt gcttattcac gatgtaatta tgttgcggca agagaaaaaa aatcgcatga
    53461 attaattact aatatattag gcattgatgc tactttatct tttgatagct tgccgttact
    53521 tgtcaaaaag gttgaaagcg aaattccaga aagtttgtat aaagaaaaat acgtatgttt
    53581 atctggtgcg gttaattata ataaagaaaa ttcatctttt atagctggtg agattttaaa
    53641 gaaatataaa aatcacaaat tagtttatct tgtcggctct ccatctggta tgaataatga
    53701 ggagccagat gtaatcgaaa gcctgaagaa atttatgcct gaactaatta ttcatgatgc
    53761 gaagtctttt actgaatggc tatctgttat taagaactca gtagtactaa tctcaggaag
    53821 gtaccattat tctattgcgg caatgtgttt tggtacacca acagtatgct tttcatctaa
    53881 tacaccaaaa ttggatgaaa ttaataagat gtttaattta ccaggctgtg tcagaacaca
    53941 tgatgaattt actaaagcgc ttaacgaaat tgacaattta acatggcaac cactttctaa
    54001 agagatgtct gacttagctg aatacaacta taatttcctt taatttattg aggttgatta
    54061 ataggttatt ataatattaa ctttctaatt cataagaata ttatgaaaat aacgtttgtt
    54121 ggcgaagcgg tatctggctt cggagggatg gaaaccgtta ttagcaacgt tatccatacg
    54181 tttgaaaata gctctccgaa aatcaactgt gaaatgtttt tcttttgtcg taatgacaaa
    54241 atggataaag catggctaaa agagattaaa tatgcgcaat cattctcaaa tataaaatta
    54301 agttttcttc gtcgatctaa gcatgtttat aattttagtc agtggctgaa agaaacgtca
    54361 ccggatattg tgatatgtat tgatgtcatc tcatgccttt atgccaataa agcacgtaag
    54421 aaaagtggta aacagtttac tattttctcg tggccgcatt tttcgctcga ccataaaaaa
    54481 catgcagaat gtataacgta cgcggattat catctggcca tcagtagtgg tattaaagaa
    54541 cagatgatgg cacgggggat ctcagagcaa gatattagcg tcgtttacaa tcctgtctct
    54601 attaaaacaa tcattgtgcc gccgcctgag cgcgataaac ccgctgtatt tctctatgta
    54661 gggcgtctta aatttgaagg gcagaaaaga gttaaagatt tatttgatgg cttagctcgt
    54721 acgacagggg aatggcagct acatattatt ggtgatggct cagattttga aaagtgccag
    54781 gcctatagcc gggagcttgg tattgagcag cgtgtgatct ggtatggttg gcaaagcgcg
    54841 ccgtggcaag tcgtacagca aaaaataaaa aatgttaccg cgttactact tacctctgca
    54901 tttgagggat ttcctatgac tctgctggaa gcaatgtcat atggaattcc atgtattagt
    54961 tctgattgta tgtctggtcc gcgcgatatg attaaacccg gtttgaatgg tgagctttac
    55021 actccgggtg ctatagatga ttttgtagga caccttaatc gagtcatttc cggtgaagta
    55081 aaatatcagc atgatattat tcccggcacg attgagcgat tttacgatgt gctatatttt
    55141 aaaaatttta ataatgcgat attctcgaaa ttacaaaagt gatcactatg agcagaaaat
    55201 attttgaaga agaagtcatt caacagactt tagattataa ctatgcacaa catagtgatg
    55261 ctaataaatt taatatagct tatgggattg ataaaaactt tctttttggc tgtggtgtct
    55321 ctattgcatc ggttctcatt gctaaccgtg agaaggcgtt agctttccat gtttttaccg
    55381 atttctttgg ccctgaagat cagcagcgat ttgatgcatt agcaaaacag tacgctacgc
    55441 agattgttgt ttatctcatt gactgtgagc gattaaaatc gctacccagt accaaaaact
    55501 ggacctatgc aacatacttt agattcatta ttgccgacta tttttcagat aaaacagata
    55561 gagtgcttta tctggatgca gatattgcat gtaagggaag tattcaggaa cttattgatc
    55621 ttaatttcgc tgaaaatgag attgcggcgg ttgttgctga aggcgagttg gagtggtgga
    55681 ctaagcgctc ggttagcctg gcaacgcctg ggttggtttc tggctatttt aatgccggtt
    55741 ttattttaat taacatacct ctttggaccg cagaaaatat ctctaagaaa gcgattgaaa
    55801 tgctaaaaga tccggaggta gtacagcgca taacgcacct tgatcaggat gtattaaata
    55861 tattgttagt gaataaagcg cgttttgttg ataaaaaatt taatacgcaa tttagtctta
    55921 actatgaatt aaaagattca gttattaatc cagttgatgc tgagactgta tttgttcatt
    55981 atatcggacc aacgaagccc tggcatagtt ggggggctta ccccgtgtca caatattttt
    56041 tacgggctaa gagcaactca ccatggtctc attgtgcact tttaaatcca gtcactagcc
    56101 atcagttacg ttatgcggca aagcatatgt ttaatcagaa gcattatact tcgggtataa
    56161 attattatat agcctacttt aaacgtaaac ttcttgaata aaacccatag gtgatgtaat
    56221 ggattcattt cctgagatag agatagctga atataaagtt tttgatgaaa gtaataataa
    56281 tgatgataac gtattaaaca tttcttatgg cgtcgatgaa aactatcttg atggtgtggg
    56341 ggtatcaatc gcttccgttg tattaaacaa taatatcccg cttgcttttc atattatttg
    56401 tgactcatac tccccgtgtt ttgtaaaata tatagagcgt ttagccgtac agcatcacat
    56461 taaaatttct ctttatctta ttaaagtaga aagccttgaa gtattgcccc aaactaaagt
    56521 atggtcgaga gcaatgtatt ttcgtttatt tgctttcgat tatctcagca agaaggtaaa
    56581 caccttactt tatttggatg ccgatgttgt atgtaaagga tctttgcaag atcttctaca
    56641 gcttgatctg acagagaaga ttgctgcggt agtaaaagat gttgattcca tccagaataa
    56701 ggtaaatgag agattaagcg cttttaattt acaaggtggt tattttaact ccggcgtggt
    56761 ttttgttaac ctgaaattat ggaaagagaa tgccttaact gaaaaggcat ttttacttct
    56821 ggcaggtaaa gaagctgact cttttaaata tcccgatcag gatgttttga atattctcct
    56881 acaggataaa gttatttttc tacctcgacc atataatacc atttatacta tcaaaagtga
    56941 gttgaaagat aggtcacata aaaaatatag caatataatt aatgataata ctattttaat
    57001 tcattatacg ggcgctacaa aaccatggca tgcctgggca aattatcctt cagttatcta
    57061 ttataaaaat gcacgactga actcgccctg gaaagattct cctgcaaaag atgcgcgtac
    57121 catagttgaa tttaagaagc gatataaaca tcttctcgtg caggggcatt attttaaagg
    57181 ccttctggct ggaagcgcat atctttatcg taaacttttc cacaaataat tcccttccct
    57241 aaatctccat tatgattatt gaaaaaaagg ttaaaaacta taccgtcttt gtcaaaaaag
    57301 acggtgaaaa atatattgag atattcaaag attttctatc ttataatcat caggttatta
    57361 aagtcttccg taatatagaa gatacaaaag ttgtattgat taatacagac tacggaaaat
    57421 atattctcaa agtatttagt ccaaaagtaa aaagtactga acgctttttc aaatcgttag
    57481 taaaaggaga ttactacgaa aagctttttc atcagacaga tcgcgtgcgg cgtgaagggt
    57541 ttgcggcgct taatgatttt tacctgctgg cggagattaa aacattacgc tatgtaaaaa
    57601 catacgtgat gataattgag tatattgaag gtattgaact tgttgatatg ccagaaattt
    57661 ctgacgaggt gagagggaaa atcaaacagt cgatatattc tctgcatcag catggtatgg
    57721 tttcgggcga tccccataaa ggtaacttta tcctgcaagg taatgagatc agaattatcg
    57781 atttgtccgg aaaaagacct tccaggcaac gaaaagcaaa ggatcgtatt gatttagaaa
    57841 gacattatgg tatcaaaaat aatgtgagag atattggatt ttacttattg atttataaga
    57901 aaaaacttcg aaatttcttg cgtcgtatta agggtaagga aaagcgctga tcaatgtagc
    57961 acgtttggtt taatttaagg ggctgactga cttttatttg ctgcagcgtt atgacatact
    58021 tgagagaatt tgagatgtaa tattagctat tgaatataac atttatttat aggttgcatg
    58081 ataaacatac gagtttttta tgggcagcgt taacttcata actcacgccg atgttctgca
    58141 acttattgcg aaaagaacgg ctgaagattg tattattttt ctttctggcc ctacgtccag
    58201 aaagacgccg ctgtccttgt tacgaatgaa agatgtcatt gcagtcaatg gttctgttca
    58261 atatttgcta aacaataacg tcaagccatt tttgtacctt ctgacggatg ttcgcttcct
    58321 ccatcgccgg cgcgaagatt tttataactt tagccgtaac agtcagttta ctatcgtcaa
    58381 tcttgatgtg tacgaacagg cttcagtgga tgatcaaaaa tatattgaag aaaactgttt
    58441 aattattcgc tccttttatc gccgagaaaa agggggcttt ttaaagaaaa ttaaatttaa
    58501 tatcctcaag cgggttcata aagcattact tatttcagtt cctctttcga aaagaggacg
    58561 actggctgga ttttgtaagg atatcagcat cgggtattgc tcttaccata ctattgctta
    58621 taccgctatt caggttgcct attccctcaa gtatggccgt attatatgtt ctgggcttga
    58681 cttaacaggg agttgcccac gtttctatga cgaatctacc agccctatgc catctgagct
    58741 tagtaaagac ctgtttaaaa tactgccatt ttttactttt atgagaaaaa atgtgagtga
    58801 tttaaatatc tttaatttat cagatgatac tgcaattcat tacgatatta ttccatatat
    58861 tacagcctcg gaacttgaag atgaaatata ttacgataaa attgtctaga cactagataa
    58921 atcattattt tgcgttgctt cggcacgcat ttctttttct ataatatatc ttttctataa
    58981 agttaactat tctggattat agctattatg attaaaaaaa tcatatttac tgttactcct
    59041 atattttcaa ttcctcctcg tggcgcggct gcggtagaaa cctggattta ccaggttgca
    59101 aaacgattat caataccgaa tgctattgct tgtataaaga atgccggcta tcctgaatat
    59161 aataaaataa acgataactg tgatattcat tacattgggt ttagtaaagt ttataagcgt
    59221 ctttttcaga aatgggctcg tctcgaccca ctaccctatt cccagcgcat ccttaatatt
    59281 agagataaag tgactaccca ggaagatagc gtcattgtta ttcataatag tatgaaactg
    59341 tatcggcaga tcagagagcg caatccgaat gcaaaactgg ttatgcacat gcataacgca
    59401 tttgaaccag aacttcctga tacggatgca aaaattatcg tgcccagtca gtttcttaaa
    59461 gcgttttatg aagaaagatt gcccgccgct gctgttagta ttgtgcctaa tggtttttgt
    59521 gctgagactt ataaaagaaa cccacaagat aatcttcgtc agcaattaaa tattgcggaa
    59581 gatgccaccg ttctcttata tgccgggaga atttcgcctg ataaaggcat cctgttgctt
    59641 ttgcaggcgt tcaaacaatt acgtacctta agaagtaata ttaaacttgt cgttgttggc
    59701 gacccttatg caagccgcaa gggtgaaaaa gcagagtatc aaaagaaagt actggacgcc
    59761 gcaaaagaga ttggaactga ttgcattatg gctggagggc aatcacctga ccagatgcat
    59821 aacttctatc atatagccga tctggttatc gtgccatctc aggttgaaga agcattttgc
    59881 atggtggctg tagaagcgat ggcagcagga aaagcggttc ttgccagcaa aaaagggggg
    59941 attagcgaat ttgtgttaga tggcataacg ggctatcacc tcgcagaacc tatgtcgagc
    60001 gacagtataa ttaatgatat taaccgtgcg cttgctgata aggaacgcca ccagattgcc
    60061 gaaaaagcaa aatccctggt gttttcaaaa tacagttggg aaaatgtagc gcagcgtttc
    60121 gaggaacaaa tgaaaagctg gtttgataag tgattgagtc ctgatgatgg aaaacgcgct
    60181 gataccgtaa taagtatcag cgcgcttttt tatctatttc ttagcgccag cagaaaaccg
    60241 gtaatgatac caatttgagc aatatcgacc tgttcaaaat tgccacgaac gatataaaaa
    60301 ccgacgaaag ataaaaatag caagagatga gcattgtagg ggcttatctc tactttcctg
    60361 aaggtagagc tggctgtttc cctgatgata gcgccatata aataggccag gctcgccaga
    60421 cccaatatgc ctgcactaaa ccagatgtac agaatggtat tatgcggacc gatagattct
    60481 ttaaaggtcc acgttggata atcgacaacg cgtttattat aaacactatc atacacatca
    60541 ttaccatagc cgtagccctt gatcgggttt tcctgaatca gtatccacgc ggtgccctgg
    60601 gttccgttag tataacgata tgagctatct gtctgctgta atttataaag taaatgttct
    60661 gggtctggtt tgttagtatg ttgagtgata accaaagcgc cgataatggc taataaaatg
    60721 gcaccaactc ctattaactt ccattggcga ttcagtattg cccatagaac acctactatg
    60781 agcactgcca accatccccc tcgcgatagg gttcccagga taaagaaaag gtagatagcg
    60841 ctaagcacca aaaaaaccaa cttaattgaa ttttttctaa acaaccaaat attcaataat
    60901 gctggaaata agaaaaccat ggaatcggac atatgtcgat gcgcatagct tatgaatggc
    60961 ataatccctt tattatagtc ctcgatatac agaatactct ctgcaaggca gcgaagtcct
    61021 aaacttgtta aaaaggagaa aagtactatt ttcgcaatcg tttcttttgt ttcatctttt
    61081 aatagtacgg gaattaataa agtatataat aagaaaccct ccagtaccgt attttcaaat
    61141 tctttgaaac tttctttcat atctggcgat atgagtatgg aataaacaag gattaatgat
    61201 aatactgctg cgctataaaa tacgctattt ttgaaaagag gggggaaact tttcggtgag
    61261 cgtgagacct gataaatcgc ggtgataacc ataagtatga ttatcaaatg tttataacgc
    61321 gtaataccat ccagaaaata cgtggcaaca aaaagaaaaa ccagcgcttt attccagatc
    61381 ggcttccatt tctctttatt taacgttaat gatgtggtta gcatcttttc tccacaatag
    61441 gtttgggatg agacagagtc tctttaatga atctttccaa atacgcttgt ggcatctaaa
    61501 ttcgccaggt tttgttctgg tgagcagcat gccatttggt tcttcccata acctccaatt
    61561 aacccagggt ccgttgggcc atatagcgta atattcggtc tgtcgagcgc ggcggtgaga
    61621 tggctcaggc cggtatcaac cgatacgaca aattttgcgc cagccagcac tctagcgacc
    61681 tcctccaggc tcatgcgcgg taacacatcc acatagtcaa agccttcggc cagtcgttta
    61741 gcacgagcct cctcatgagg cgcgccccag ggaagtttta tccgtaatcc ggtgttgccc
    61801 accaggccga taagctcgcg ccagtttgct tccggccagt gtttatcatc gcgggtcgtg
    61861 gcatgtaaaa acaccgcata cggatcgcta accgcctgct ggcaatgcag aaaatgtttt
    61921 gcgatggcat aatcgccctg cgactgcggt ttatcgtatc ccaggctttt ggcgaacagc
    61981 tcgcgcgtcc gttcaaccgc atgttgttgc tttgcgatat ggtgtttacg gttataaaac
    62041 aggctggcca gcggttcgcg ggcggtactc cagtccatac cgtgctttat cccatgcgcc
    62101 agacgcgtca ccagcgccgc gctttttacc agcccctgcg catcaatcac agcgtcgtat
    62161 tggtatgcgc ataccgcccg atgaaaggct atgcgttccg ctttaatggg cgcggaaaac
    62221 caggccttgc gccaacggcg aatagcgacg ggaatcacgc gatcgacagc actgtgccag
    62281 gacggaattt gtgcaaaccc ttcttcgaca acccaatcaa attgaatccc cggaatcgcc
    62341 tgttgcgcgt cggtaagcgc aggcagggta tgtaatacgt cgcccatcga tgatgtttta
    62401 acgatcaaaa ctcgcattaa acgccctctt ccgacaacag cgaatgaagc tcttccagaa
    62461 cccgctgcgg cgtgatatcg atcaggctct ggtgatagcc ttgcgccgta tcgcctttac
    62521 gcactttgtg gtaacccgta atgagacgaa tcacccgggc cttatgagac agcggcggcg
    62581 tgaaatccgg gctacttggg ccatacaacg cgaccagcgg gcggtcgagc gccgccgcga
    62641 cgtgcatcag cccggaatcg ttagtgacga tggctttaca ggcggctatc agaatgacgg
    62701 cctgttccag ctgggtttcc cctgccaggt tgcgacacca tgcctgttgc tcgctattca
    62761 gcgccgccag gatctcattt ccggcttcat ggtcttttgc cgagccaaac agcacgacct
    62821 gatacccttc gttaatgagc tgctttgcca gttcggcgta gtgatagtgc ggccaacgtt
    62881 ttgccgggcc aaattctgct ccggggcaaa agccgattag aggacgttca gaagatagcg
    62941 aaaaatcgct gtacatcagc gatttttcac cctcgctaac ctggagctgt ggccagagca
    63001 gcggctgcgg cagatctttc gccgtgcgca tcacgccctt gtcataggcc agcgccacgt
    63061 agcgctccac catcagcggc caggcgtctt tatcaaggac gcgcgcatcg ttcagcaggc
    63121 catagcgcat ttcgccacgc cagccggtac ggtgcgggat attggcaaag aaaggaatca
    63181 gcgccgattt aaacgaattt ggcagcaccc aggcgcgatc gtagcgcctc tctcgcaggc
    63241 tatggcccaa tctgcggcgc tcgccgattt ccagcgcgcc gtggcccagc ggcatgggta
    63301 tcgcctcgtt aacttccggc atacgcgata acaacggacg gcaccaggct ggcgccatca
    63361 cgtcgattat cgcctgggga tagcgcgctt taagcgtgcg atagagactt tgcgacatca
    63421 tcatgtcgcc cacccaggac gggccaatga ccaaaatttt catacttacg cgtcgcggtt
    63481 cagccaggcc atatactccg tgacgccttc ggcgacggtc ttaaagggtt tgtcgtagcc
    63541 cgcgttgcgc agattggtta aatccgcctg cgtaaacgcc tgatagcgac ctttcagctt
    63601 atccgggaac ggaatgtatt caatgctgcc ttttttatgg tatgccagcg tcgcgtcggc
    63661 gacggcctgg aaagattccg cgcggcctgt gcccaggtta aagatgccgg acttgccgct
    63721 ttccaggaac cacaggttaa cggcggccac atcgcccacg taaacgaagt cgcgcttgaa
    63781 gttttcgctg ccttcaaaca gtttcggact ttcgccgttg tttaactgtg tattcagatg
    63841 aaatgccacg cttgccatgc tgcctttatg gccttcacgt ggtccataga cgttgaaata
    63901 gcggaaaccg acaatctgcg agttcgcttc tggcaggatc tggcgcacgt attcatcaaa
    63961 caggaattta gaatagccgt aaacgttaag cggtttttcg tattcacgcg attcgatgaa
    64021 atcagacgtg cgaccgccat aggtggcggc agaagaggcg tagaggaacg ggatttcgcg
    64081 ctcaagacaa tagtgcagca gctctttgga gtattgatag ttattatcca tcatatactt
    64141 gccgtcccac tcggtggtgg aagagcaggc gccttcatgg aaaatagctt cgatatcgcc
    64201 gagctcttct ccggacataa tctggatcag gaaatcttcc ttatccatat agtcagcaat
    64261 gttcagatcc accaggttta caaacttggt gccgtctttc aggttatcca ccaccagaat
    64321 atcggtgata cctttatcat tcagggcctt aacgatattg ctgccgataa agcccgcgcc
    64381 gccggtaacg atgatcataa ctgtaacctt tgaattatgg tgtcagagac tgtctcagac
    64441 atgaatgctt ttatcatatc actattcatc cattcactga taactcgtga ggatacgcgt
    64501 gatttatgct gcattttaaa gaagtgatga cgcgtcatct cgtatcaccg tatagctttg
    64561 ggtaatatgt gctgaaattt gcccagtctg gagaatcgca atgcgtgggg atttttacaa
    64621 acagttaacc aacgatctgg aaaccgcccg ggcggaagga ttgtttaaag aagagcgcat
    64681 tattacgtct gcgcagcagg cggatatcac cgtggcggat ggaagccacg ttattaactt
    64741 ttgcgccaat aactatctcg ggctggcgaa tcaccctgag ctgattaatg ccgcaaaagc
    64801 gggcatggac agccacggtt tcggtatggc gtccgtgcgt tttatctgcg gcacccagga
    64861 cagccacaaa gcgctggagc aaaagctggc aagcttcctc ggcatggaag atgcgattct
    64921 gtattcctcc tgtttcgacg ctaacggcgg cttgtttgag acgttgctgg gcgcggaaga
    64981 cgctattatt tccgacgcgc tgaaccacgc gtctatcatt gacggcgtgc gtttgtgtaa
    65041 agcgaagcgc tatcgctatg ccaacaacga tatggtagag ctggaagctc ggctgaaaga
    65101 ggcgcgtgaa gccggcgcgc gtcatgtcct gatcgccacc gacggggtgt tctcaatgga
    65161 tggcgtcatc gccaatctga aaggcgtctg tgatctggcc gataaatacg atgcgctggt
    65221 gatggttgat gattctcacg cggtaggctt tgtcggcgaa aacggtcgcg gttcccatga
    65281 atactgcgac gtaatgggcc gcgtagatat tattaccggt acgctgggca aagcgttagg
    65341 cggcgcatcc ggcggctata ccgcggcgcg taaagaggtc gttgagtggt tgcgtcagcg
    65401 ttcccgccca tatctgttct ccaactccct ggcgccggca atcgtggcgg cttctattaa
    65461 agtgttggag atggtggaag cgggcgcaga actgcgcgat cgcttgtggg cgaacgcccg
    65521 gcagttccgt gagcagatgt ctgccgcggg atttacgctg gcaggcgcgg atcacgccat
    65581 catcccggta atgctgggag atgcggttgt cgcgcagaaa tttgcccgcg aactgcaaaa
    65641 agagggcatt tacgttaccg gtttcttcta tccggtcgta ccaaaaggtc aggcgcgtat
    65701 tcgtacccag atgtctgcgg cgcatacgcc tgagcaaatt acgcgtgcgg tagacgcgtt
    65761 cacgcgtatt ggtaaacaac tgggcgtgat tgcctgagga tgtaagatga aagcgttatc
    65821 caaactgaaa gcggaagagg gcatctggat gaccgacgtt ccggaaccgg aagtcggcca
    65881 taacgatttg ctgattaaaa tccgtaaaac agccatctgc ggcactgacg ttcacatcta
    65941 taactgggat gaatggtcgc aaaaaaccat cccggttccg atggtcgtgg ggcatgaata
    66001 tgtcggcgaa gtggtcggca tcggtcagga agtgaaaggc tttaaaatcg gcgatcgcgt
    66061 ctccggcgaa ggtcacatca cttgcggtca ttgccgcaac tgccgtggcg gtcgtactca
    66121 cctgtgtcgc aacaccaccg gcgtgggcgt caaccgtccc ggctgcttcg cggaatacct
    66181 ggtcatcccg gcattcaatg cgtttaaaat cccggataac atttctgatg atttagcctc
    66241 tattttcgac ccgtttggta atgcggtgca tacggcgctg tctttcgatc tggtcggcga
    66301 agatgtactg gtatcggggg cggggccaat cggcgtaatg gccgccgcgg tggcgaaaca
    66361 tgtcggcgcg cgtcatgtgg tgattactga cgtcaatgaa taccgtctgg agctggcgcg
    66421 caaaatgggc gtcacccgcg cggtcaacgt cgcgaaagag agcctgaacg acgtcatggc
    66481 ggagctggga atgaccgaag ggtttgatgt gggtctggag atgtccggcg cgccgccggc
    66541 gtttcgtacc atgctggaca ccatgaatca cggcggtcgt attgcgatgc tggggattcc
    66601 gccatcagat atgtctatcg actggacaaa agtcatcttt aaaggcttgt tcattaaagg
    66661 tatttatggt cgtgagatgt tcgaaacgtg gtacaaaatg gcggcgctga tccagtccgg
    66721 tctggatctg tcaccgatta tcacccatcg tttctctgtt gatgattttc agaaaggttt
    66781 tgacgccatg tgttcaggcc agtcaggaaa agtcattctg agctgggatt aatatgtata
    66841 tacccaaaat aattcgagtt gcttaaaggc ggcaagggag tgagtcccca ggagcataga
    66901 taactatgtg actggggtga acgacaaatc tgccgggagc agatttgaac gtcgcgtgcg
    66961 acggcccgtc agggcgaggc ccatagatgg gccgagtaat ccgtagccaa cacataagca
    67021 acttgaagta tgaagggtat agagacccaa tgatatttat cgggtctgat atacgtttca
    67081 tcgtaaaagg ttggtgtcat tcgccaacct tttttgttag ggaaaatctg gaaagctgta
    67141 aagaattgtc atagacatca agcattcgta attgcgcttt aatcttattt tactcgctaa
    67201 cgtcacgccc tactctgagt tttgtgcttg ctttttactg taaaaattaa ttatggcggc
    67261 ttaatagttt cttaatagag ccacagtata aaggcagggt aaattaaggt ttttctggta
    67321 atcgttatga aaaatagtaa aaccaaagtg agtatcatta tcccgttata taatgcggga
    67381 gcggatttta atgcttgcat ggcgtcgtta atcgcgcaaa cgtggtcggc gctggaaatt
    67441 attattgtga atgatggatc gacagatcat tccattgaga tagcaaaaca ttacgcggaa
    67501 cattacccgc acgttcgact gcttcatcag gccaatgctg gcgcatctgt cgcccgtaat
    67561 cttggtttgc aagcggcgac cggagattat gtcgcctttg tcgatgcgga tgacctggtc
    67621 tacccgaaga tgtatgaaac gctgatgact atggcgctta acgatgatct ggacgttgcg
    67681 cagtgtaatg cggactggtg cgtccgaaaa accgggcacg cctggcaatc tattccgacc
    67741 gatcgtctgc gttccaccgg ggtattaagc ggaccggatt ggttgcgtat ggcattggcc
    67801 tcgcgacgct ggacgcatgt tgtctggatg ggcgtttatc gacgtgcgtt aattaccgat
    67861 aacaatatta ctttcgttcc cggactacat catcaggaca tattatggtc gacggaagtt
    67921 atgtttaatg ccacgcgcgt acgttatacc gaacaatcat tatataaata tttcctgcat
    67981 gataattcgg taagccgttt gcaaagacaa ggcaataaaa atcttaatta tcagcggcat
    68041 tatattaaaa ttacgcggtt attagaaaag ctcaatcgtg attatgcccg gcgtattccg
    68101 atttacccgg agtttcgcca gcaaattacc tgggaagcgt tacgcgtttg tcatgcggtg
    68161 cgtaaagaac ctgatatttt gacccgccag cgtatgattg ccgaaatttt tacttctggc
    68221 atgtatagac ggatgatggc taacgtccgc agcgcgaaag cggcttatca gacgctgctc
    68281 tggtccttcc ggctgtggca atggcgcgac aaaaccttgt cgcaccgtcg tatggcccgt
    68341 aaggcgctca atctgtctta gcgctcatgt ttttaggcgc ggcgattttc ccccagcctt
    68401 gccactggtg ctgaaaccag acaatcacgg aactttgcgt aatgctctcg ccgatgacgc
    68461 tgaaaaagcg cgtagcgtag actggttgca gcggtttttt cggcttgcac atcttcacgc
    68521 cgcgaaaggg attgcgcggc gcgtcaattt tctgcggcgt caaatcaggt cgagacgtat
    68581 ctacctgcgg ttcgttgagc aggctgcctg gacgtaccag ggtgatatct gccggcaggc
    68641 gataaaccat ctgttgcagc acgcgaaccg ttgcgggatg cggatgacca atcgcgatag
    68701 cggaaccgtt gcgacgggcc agttcgatag tgcgattaaa ctgacgacgg atatccgcct
    68761 cgttttgcgt atcgtcgagg aacactttgc gcttgatcac tttcacaccc gtaccggatg
    68821 ccgcgcgcat cgcctggcta ttgccaatcg tcatgctgtc gagaaaatag agattgtaat
    68881 gttccagcgc ctgcataact ttttgcatac cgaacaggct ggaagtcatt gcgctgccca
    68941 tgtggttatt aagcccaacg gcatacggca cgttgtttac cgcctcgcgg ataatgcgct
    69001 cgatctcatc gctgctcata tctggtcgca gcgtatcctt ctccagcggc tgtttgctta
    69061 gcggcgccat cggcagatgg attaacacct catgcccgct attgtgcgct ttagtcgcca
    69121 tttcgcgcgc gtgcggcgcg ttgggcagta cagcgacgga gatgtttggc ggcagcgcca
    69181 gaacctggtt ttccgtgtgc gggcgatagc caaaatcatc aatcacgatg gcgagcttgc
    69241 cagcgaaaac gggatgtgca aatgccagca aagtggccag cgtgagaatg gagcgacgaa
    69301 actgaggcaa aacttatctt cccaaccacg gctgtggatt gacggcctga ccctggcgac
    69361 gaatttcgaa ataaagcgaa ggtctgccct gaccgccgct actgcccaca agggcgatag
    69421 gttgtccggc gcgcacctgc gcgcctacgc tgaccagcgc gctctggtta tagccgtaaa
    69481 ggctcatatc acctttacca tgctccacga ccaccaccag gccatagcct tgcagccagt
    69541 ccgccagaat caccctgccg tcggcgatgg ctttgacctc ggtgccttcc gacgcgccga
    69601 tcaccatccc cttccaacgt agctcaccct gcagccgttc gccataacga tgcaatatcg
    69661 ggccacgtac cggccagtat gcctgaccgc gag
//
LOCUS       DAGWFR010000009        60248 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.009, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000009 DAGWFR010000000
VERSION     DAGWFR010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 60248)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 60248)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..60248
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.009"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(57..410)
                     /locus_tag="MOX77_000652"
     CDS             complement(57..410)
                     /locus_tag="MOX77_000652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356292.1"
                     /translation="MADAFILLGIVMAMVSLGFILINKLFCFISAGCLLSLCASMASL
                     QLWDASYWGRWGKVCPGLDVIISCDNYHSLYDLGWGLYGIAFLFFTALMLTCVVIILI
                     NMIMALERYCAGWRR"
     gene            complement(518..3064)
                     /gene="cyaA"
                     /locus_tag="MOX77_000653"
     CDS             complement(518..3064)
                     /gene="cyaA"
                     /locus_tag="MOX77_000653"
                     /EC_number="4.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I adenylate cyclase"
                     /protein_id="HCA3356293.1"
                     /translation="MYLYIETLKQRLDAINQLRVDRALAAMGPAFQQVYSLLPTLLHY
                     HHPLMPGYLDGNVPSGICFYTPDETQRHYLNELELYRGMTPQDPPKGELPITGVYTMG
                     STSSVGQSCSSDLDIWVCHQSWLDGEERQLLQRKCSLLESWAASLGVEVSFFLIDENR
                     FRHNESGSLGGEDCGSTQHILLLDEFYRTAVRLAGKRILWSMVPCDEEEHYDDYVMTL
                     YAQGVLTPNEWLDLGGLSSLSAEEYFGASLWQLYKSIDSPYKAVLKTLLLEAYSWEYP
                     NPRLLAKDIKQRLHDGEIVSFGLDPYCMMLERVTEYLTAIEDPTRLDLVRRCFYLKVC
                     EKLSRERACVGWRREVLSQLVSEWGWDDARLTMLDNRANWKIDQVREAHNELLDAMMQ
                     SYRNLIRFARRNNLSVSASPQDIGVLTRKLYAAFEALPGKVTLVNPQISPDLSEPNLT
                     FIHVPPGRANRSGWYLYNRAPNMDSIISHQPLEYNRYLNKLVAWAWFNGLLTSRTHLF
                     IKGNGIVDLPKLQEMVADVSHHFPLRLPAPTPKALYSPCEIRHLAIIVNLEYDPTAAF
                     RNKVVHFDFRKLDVFSFGEEQNCLIGSIDLLYRNSWNEVRTLHFNGEQAMIEALKTIL
                     GKMHQDAAPPDSVEVFCYSQHLRGLIRTRVQQLVSECIELRLSSTRQETGRFKALRVS
                     GQTWGLFFERLNVSVQKLENAIEFYGAISHNKLHGLSVQVETNQVKLPSVVDGFASEG
                     IIQFFFEETGDEKGFNIYILDESNRAEVYHHCEGSKEELVRDVSRFYSSSHDRFTYGS
                     SFINFNLPQFYQIVKTDGRAQVIPFRTQPINTVPPANQDHDAPLLQQYFS"
     gene            3441..4382
                     /gene="hemC"
                     /locus_tag="MOX77_000654"
     CDS             3441..4382
                     /gene="hemC"
                     /locus_tag="MOX77_000654"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HCA3356294.1"
                     /translation="MLDNVLRIATRQSPLALWQAHYVKDALMATHPGLTVELVPMVTR
                     GDVILDTPLAKVGGKGLFVKELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICERE
                     DPRDAFVSNKYHSLDDLPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLD
                     NGDYDAIILAVAGLKRLGLESRIRTALPPDVSLPAVGQGAVGIECRLDDARTQALLAP
                     LNHSQTALRVTAERAMNTRLEGGCQVPIGSYAEIINGEIWLRALVGAPDGSVMVRGER
                     RGSPEQAEQMGISLAEELLENGARAILTEVYNGETPA"
     gene            4379..5119
                     /gene="hemD"
                     /locus_tag="MOX77_000655"
     CDS             4379..5119
                     /gene="hemD"
                     /locus_tag="MOX77_000655"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HCA3356295.1"
                     /translation="MSILITRPSPAGEALVSRLRALGQVAWSFPLIEFVAGRELPTLA
                     DRLATLTENDLVFALSQHSVAFAHAQLQRDGRNWPASPRYFSIGRTTALALHTVSGFD
                     IRYPLDREISEALLQLPELQNIAGKRALILRGNGGRELLGETLTVRGAEVSFCECYQR
                     CAKHYDGAEEAMRWHTRGVTTLVVTSGEMLQRLWSLTPQWYREHWLLRCRLLVVSERL
                     AHLARELGWQDIKVADNADNDALLRALQ"
     gene            5141..6310
                     /gene="hemX"
                     /locus_tag="MOX77_000656"
     CDS             5141..6310
                     /gene="hemX"
                     /locus_tag="MOX77_000656"
                     /EC_number="2.1.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HCA3356296.1"
                     /translation="MTEQEKSSAVVDETRETVETTPQPVNTEKKSKNGAALVLSAVAI
                     AIALAAGIGLYGWGKQQATAQTETSDALATQLTALQKAQESQKAELEGIIKKQAAQLD
                     DANRQQAALAKQLDEVQQKVATISGSDAKTWLLAQADFLVKLAGRKLWSDQDVTTAAA
                     LLKSADASLADMNDPSLITARRAITDDIASLSSVAQIDYDGIILKLNQLSNQIDNLRL
                     ADNDTDGSPMDSDSSELSSSLSEWRVNLQKSWQNFMDSFITIRRRDDTAVPLLAPNQD
                     VYLRENIRSRLLVAAQAVPRHQEETYRQALDNVSTWVRAYYDTDDAATKAFLEEVDKL
                     SQQNITMDLPETLGSQAILEKLMQTRVRNLLAQPTVSTAAPATQTDAPAAAPQGE"
     gene            6313..7509
                     /gene="hemY"
                     /locus_tag="MOX77_000657"
     CDS             6313..7509
                     /gene="hemY"
                     /locus_tag="MOX77_000657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoheme IX biogenesis protein HemY"
                     /protein_id="HCA3356297.1"
                     /translation="MLKVLLLFVLLLAGIVVGPMIAGHQGYVLIQTDNYNIETSVTGL
                     AIILIVAMVVLFAIEWLLRRLFRTGAHTRGWFASRKRRRARKQTEQALLKLAEGDYQQ
                     VEKLMSKNADHAEQPVVNYLLAAEAAQQRGDEARANQHLERAAELAGNDTIPVEITRV
                     RLQLARNENHAARHGVDKLLEVTPRHPEVLRLAEQAYIRTSAWSSLLDIIPSMAKAHV
                     GDEAHRAMLEQQAWIGLMDQARAEQGSEGLRTWWKNQSRKTRHQVALQVAMAEHLIEC
                     DDHDMAQQIIIDGLKRQYDDRLVLPIPRLRTNNPEQLEKVLRQQIKTVGDRPLLWSTL
                     GQSLMKHGEWQEATLAFRAALKQRPDAYDYAWLADALDRLHQPEEAAAMRRDGLMLTL
                     QNNPPQ"
     gene            complement(8091..8167)
                     /locus_tag="MOX77_000658"
     tRNA            complement(8091..8167)
                     /locus_tag="MOX77_000658"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8131..8133),aa:Pro,seq:tgg)
     gene            complement(8210..8296)
                     /locus_tag="MOX77_000659"
     tRNA            complement(8210..8296)
                     /locus_tag="MOX77_000659"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8260..8262),aa:Leu,seq:cag)
     gene            complement(8317..8392)
                     /locus_tag="MOX77_000660"
     tRNA            complement(8317..8392)
                     /locus_tag="MOX77_000660"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8357..8359),aa:His,seq:gtg)
     gene            complement(8447..8523)
                     /locus_tag="MOX77_000661"
     tRNA            complement(8447..8523)
                     /locus_tag="MOX77_000661"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8487..8489),aa:Arg,seq:ccg)
     gene            complement(8626..10011)
                     /locus_tag="MOX77_000662"
     CDS             complement(8626..10011)
                     /locus_tag="MOX77_000662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HCA3356298.1"
                     /translation="MAEKKPELQRGLEARHIELIALGGTIGVGLFMGAASTLKWAGPS
                     VLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHRYMSPFFGYLTAWSYWFMWMA
                     VGISEITAIGVYVQFWFPEMAQWIPALIAVGLVALANLAAVRLYGEIEFWFAMIKVTT
                     IIVMIIIGLGVIFFGFGNGGQAIGFGNLTEHGGFFAGGWKGFLTALCIVVASYQGVEL
                     IGITAGEAKNPQVTLRSAVGKVLWRILIFYVGAIFVIVTIFPWNEIGSNGSPFVLTFA
                     KIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALAKNRQLPAAVAKVSRHGVPVA
                     GVALSILILLVGSCLNYIIPNPQRVFVYVYSASVLPGMVPWFVILISQLRFRRAHKEA
                     IADHPFRSIMFPWANYLTMAFLVCVLIGMYFNEDTRMSLFVGVIFLLAVTLVYKVFGL
                     NRHGTAHKVGE"
     gene            complement(10218..10958)
                     /gene="rffM"
                     /locus_tag="MOX77_000663"
     CDS             complement(10218..10958)
                     /gene="rffM"
                     /locus_tag="MOX77_000663"
                     /EC_number="2.4.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide
                     N-acetylmannosaminouronosyltransferase"
                     /protein_id="HCA3356299.1"
                     /translation="MTNNAAAPLYSLRGLPLIGWRDMSHALNYLFADGQLKQGTLVAI
                     NAEKLLTAEDNPEVRALIAAAEFKYADGISVVRSIRKKFPQAQVSRVAGADLWEALMA
                     RAGKEGTPVFFVGGKPEVLAQTEAKLRTQWNVNIVGSQDGYFTPEQRQALFARIHASG
                     AKIVTVAMGSPKQELLMRDCREVHPHALYMGVGGTYDVFTGHVKRAPKIWQNLGLEWL
                     YRLLSQPKRITRQMRLLRYLRWHYTGDL"
     gene            complement(10955..12313)
                     /gene="wzyE"
                     /locus_tag="MOX77_000664"
     CDS             complement(10955..12313)
                     /gene="wzyE"
                     /locus_tag="MOX77_000664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECA oligosaccharide polymerase"
                     /protein_id="HCA3356300.1"
                     /translation="MSLMQFSGLLVVWLLSTLFIATLTWFEFRRVRFNFNVFFSLLFL
                     LTFFFGFPLTSVLVFRFDVGVAPPEILLQALLSAACFYGVYYVTYKTRLRKRVVDVPR
                     KPLFTMNRVETHLTWVILMGIALVSVAIFFMHNGFLLFRLHSYSQIFSSEVSGVALKR
                     FFYFFIPAMLVVYFLRQDSKAWLFFLVSTVAFGLLTYMIVGGTRANIIIAFAIFLFIG
                     IIRGWISLWMLAAAGVLGIVGMFWLALKRYGLNVSGDEAFYTFLYLTRDTFSPWENLA
                     LLLQNYHNIDFQGLAPIVRDFYVFIPTWLWPGRPSIVLNSANYFTWEVLNNHSGLAIS
                     PTLIGSLVVMGGALFIPLGAIVVGLIIKWFDWLYELGNREPNRYKAAILHSFCFGAIF
                     NMIVLAREGLDSFVSRVVFFLVVFGASLLVAKLLFWLFDSAGLIHKRTTSLPQAQMDG
                     KL"
     gene            complement(12310..13389)
                     /locus_tag="MOX77_000665"
     CDS             complement(12310..13389)
                     /locus_tag="MOX77_000665"
                     /EC_number="2.4.1.325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TDP-N-acetylfucosamine:lipid II
                     N-acetylfucosaminyltransferase"
                     /protein_id="HCA3356301.1"
                     /translation="MTVLIHVLGSDIPHHNHTVLRFFNDTLAATGEHAREFMVAGEDN
                     GFTESCPALSLRFYGSKKALAQAVIAKAKANRRQRFFFHGQFNISLWLALLSGGIKPA
                     QFYWHIWGADLYEVSNGLKFRLFYPLRRIAQGRVGGVFATRGDLSYFARQHPGVRGEL
                     LYFPTRMDPSLNAMAKERQRAGKLTILVGNSGDRSNQHIAALRAVYQQFGDTINVVVP
                     MGYPANNQAYIDEVRQAGLALFSAENLQILSEKMEFDAYLALLRQCDLGYFIFARQQG
                     IGTLCLLIQADIPCVLNRDNPFWQDMAEQHLPVLFTTDDLNEQVVREAQRQLASVDKS
                     GITFFSPNYLQPWHNALRIAAGEAE"
     gene            complement(13386..14636)
                     /gene="wzxE"
                     /locus_tag="MOX77_000666"
     CDS             complement(13386..14636)
                     /gene="wzxE"
                     /locus_tag="MOX77_000666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid III flippase WzxE"
                     /protein_id="HCA3356302.1"
                     /translation="MSLAKASLWTAVSTLVKIGAGLLVVKLLAVSFGPSGVGQAGNFR
                     QMITVLGVLAGAGIFNGVTKLVAQHHDDPAQLRTVVGTSSAMVLGFSTLLALVFLLAA
                     APISQGLFGHTDYQGLVRLVALVQMGIAWANLLLALMKGFRDASGNALSLIVGSFLGV
                     AAWYLCYRVGGYEGALLGLALVPALVVVPAGIILIKRGTVPLRYLKPSWDNGLAGQLS
                     KFTLMALITSVTMPVAYVMMRNQLAAHYSWSDVGIWQGVSSISDAYLQFITASFSVYL
                     LPTLSRLTEKQDITREVVKALKFVLPAVAAASFTVWLLRDFAIWLLFSAKFTAMRDLF
                     AWQLVGDVLKVGAYVFGYLVIAKASLRFYILAEISQFILLTAFAHWLIPAHGALGAAQ
                     AYMATYIVYFSLCCGVFLLWRRRA"
     gene            complement(14638..15768)
                     /gene="rffA"
                     /locus_tag="MOX77_000667"
                     /gene_synonym="fcnA"
                     /gene_synonym="wecE"
     CDS             complement(14638..15768)
                     /gene="rffA"
                     /locus_tag="MOX77_000667"
                     /gene_synonym="fcnA"
                     /gene_synonym="wecE"
                     /EC_number="2.6.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-amino-4,6-dideoxygalactose transaminase"
                     /protein_id="HCA3356303.1"
                     /translation="MIPFNAPPVVGTELEYMQSAMSSGKLCGDGGFTRRCQQWLEQHF
                     GSAKVLLTPSCTASLEMAALLLDIQPGDEVIMPSFTFVSTANAFVLRGAKIVFVDIRP
                     DTMNIDETLIEAAITDKTRAIVPVHYAGVACEMDVIMALADKYNLFVVEDAAQGVMST
                     YKGRALGTIGHIGCFSFHETKNYTAGGEGGATLINDRTLIERAEIIREKGTNRSQFFR
                     GQVDKYTWRDIGSSYLMSDLQAAYLWAQLEAADRINQQRLSLWQTYYDALTPLARAGR
                     IELPSIPENCGHNAHMFYIKLRDIADRSALINFLKEAEIMAVFHYIPLHDCPAGDKFG
                     EFIGDDVYTTKESERLLRLPLFYNLAPVDQRTVITTLLNYFS"
     gene            complement(15773..16450)
                     /gene="rffC"
                     /locus_tag="MOX77_000668"
                     /gene_synonym="wecD"
     CDS             complement(15773..16450)
                     /gene="rffC"
                     /locus_tag="MOX77_000668"
                     /gene_synonym="wecD"
                     /EC_number="2.3.1.210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026256.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-amino-4,6-dideoxy-D-galactose
                     acyltransferase"
                     /protein_id="HCA3356304.1"
                     /translation="MPVRASIEPLHWENTFFGVNSGIVRIDASAPELTPEALQAWQRV
                     QAKVPAENIAWLSALQSLGFSLVEGEVDFALPVKGHRDQHGAEIAHLTDIPALRQLAG
                     EAFTQSRFRAPWYAPDASARFYAQWIENAVRGTFDHQCLVLRTETGAIRGYVSLRELN
                     DTDVRIGLLAGRGAGAELMQAAICWAQSRGKATLRVATQLGNTAALKRYIQSGANIES
                     TAYWLYR"
     gene            complement(16428..17309)
                     /gene="rfbA"
                     /locus_tag="MOX77_000669"
     CDS             complement(16428..17309)
                     /gene="rfbA"
                     /locus_tag="MOX77_000669"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HCA3356305.1"
                     /translation="MKGIILAGGSGTRLHPITRGVSKQLLPVYDKPMIYYPLSVLMLA
                     GIREILIITTPEDKRDFQRLLGDGAAFGIDLHYAEQPSPDGLAQAFIIGETFLNGEPS
                     CLVLGDNIFFGQGFSPKLRQVAARTEGATVFGYQVMDPERFGVVEFDDDFRALSLEEK
                     PKQPKSNWAVTGLYFYDSKVVEYAKRVKPSGRGELEITSINQMYLEEGKLTVELLGRG
                     FAWLDTGTHDSLIEASTFVQTVEKRQGFKIACLEEIAWRNGWLDDDGLKRAASQLEKT
                     GYGQYLLELLRARPRQY"
     gene            complement(17335..18399)
                     /gene="rffG"
                     /locus_tag="MOX77_000670"
                     /pseudo
     CDS             complement(17335..18399)
                     /gene="rffG"
                     /locus_tag="MOX77_000670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462812.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
     gene            complement(18399..19661)
                     /gene="wecC"
                     /locus_tag="MOX77_000671"
     CDS             complement(18399..19661)
                     /gene="wecC"
                     /locus_tag="MOX77_000671"
                     /EC_number="1.1.1.336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetyl-D-mannosamine dehydrogenase"
                     /protein_id="HCA3356306.1"
                     /translation="MSFTTISVIGLGYIGLPTAAAFASRQKQVIGVDINQHAVDTINR
                     GEIHIVEPALGNVVKMAVEGGFLRATTTPVEADAYLIAVPTPFKGDHDPDMAYVEAAA
                     KSIAPVLKKGALVILESTSPVGATEQMAGWLAGMRPDLTFPQQAGEQADVNIAYCPER
                     VLPGQVMVELIKNDRVIGGMTPVCSARASALYKIFLEGECVVTNSRTAEMCKLTENSF
                     RDVNIAFANELSLICAEQGINVWELIRLANRHPRVNILQPGPGVGGHCIAVDPWFIVA
                     QNPQQARLIRTAREVNDGKPHWVVDQVKAAVADCLAATDKRASEVKIACFGLAFKPNI
                     DDLRESPAMGIAQSIARWHSGETLVVEPNIRQLPKKLDGLCTLAKLDAALAAADVLVM
                     LVDHDEFKAIPGDAVHQRYVVDTKGVWR"
     gene            complement(19658..20788)
                     /gene="wecB"
                     /locus_tag="MOX77_000672"
     CDS             complement(19658..20788)
                     /gene="wecB"
                     /locus_tag="MOX77_000672"
                     /EC_number="5.1.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (non-hydrolyzing)"
                     /protein_id="HCA3356307.1"
                     /translation="MKVLTVFGTRPEAIKMAPLVHALEKDPHFEAKVCVTAQHREMLD
                     QVLTLFSIVPDYDLNIMQPGQGLTEITCRILERLKPILADFKPDVVLVHGDTTTTIAT
                     SLAAFYQRIPVGHVEAGLRTGDLYSPWPEEANRTLTGHLAMYHFAPTENSRQNLLREN
                     IPDERIFVTGNTVIDALIWVRDRVLTSDTLQAELAEQYPFLNANKKMILVTGHRRESF
                     GQGFEHICQALAEIAAANQNVQIVYPVHLNPNVSEPVNRILGHVENVVLIEPQDYLPF
                     VWLMNHAWLILTDSGGIQEEAPSLGKPVLVMRETTERPEAITAGTVRLIGTDSRRIVA
                     EVMRLLHDENEYQTMSRAHNPYGDGQSCARILQALKSYRVSL"
     gene            complement(20844..21890)
                     /gene="wzzE"
                     /locus_tag="MOX77_000673"
     CDS             complement(20844..21890)
                     /gene="wzzE"
                     /locus_tag="MOX77_000673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECA polysaccharide chain length modulation
                     protein"
                     /protein_id="HCA3356308.1"
                     /translation="MTQPLPGARAVSAENELDIRGLFRTLWAGKFWIIGIGLLFALIA
                     LAYTFFARQEWSATAITDRPTVNMLGGYYSQQQFLRNLDIKTDPASSDKPSVMDEAYK
                     EFIMQLASWDTRRDFWLQTDYYKQRMVGNSKADAVMLDELINNIQFTPGDFTRAINDN
                     VRLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTVQMKAQVKRQEEVAKA
                     IYSRRVNSIEQALKIAEQHNISRSATDVPADELPDSELFLLGRPMLQARLENLQAVGP
                     AFDLDYFQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGA
                     LIGAGVALTRRRTI"
     gene            complement(21902..23005)
                     /gene="wecA"
                     /locus_tag="MOX77_000674"
     CDS             complement(21902..23005)
                     /gene="wecA"
                     /locus_tag="MOX77_000674"
                     /EC_number="2.7.8.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine--undecaprenyl-phosphate
                     N-acetylglucosaminephosphotransferase"
                     /protein_id="HCA3356309.1"
                     /translation="MKLLTALSELISIFLFTTIFIFLARKVAIKIGLVDKPNFRKRHQ
                     GVIPLVGGISVFAGICFMFGLSDYYIPHLSLYLICAGVLVFVGAMDDRFDISVKIRAV
                     VQAVIAVVMMVIAKLHLGSLGYIFGPWELVLGPFGYFLTLFAVWAAINAFNMVDGIDG
                     LLGGLSSVSFAAMGLILWFDGQTSLAMWCFAMIAAILPYIMLNLGILGRRYKVFMGDA
                     GSTLIGFTVIWLLLETTQGKTHSISPVTALWIIAIPLMDMVAIMYRRLRKGMSPFSPD
                     RQHIHHLVMRAGFTSRQAFVLITLAAAILAGVGVTAEYSHFVPEWVMLVLFLLAFFLY
                     GYCIKRAWKVARFIKRVKRRLRRQRKNRPNLTK"
     gene            complement(23235..24494)
                     /gene="rho"
                     /locus_tag="MOX77_000675"
     CDS             complement(23235..24494)
                     /gene="rho"
                     /locus_tag="MOX77_000675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017492510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HCA3356310.1"
                     /translation="MNLTELKNTPVSELITLGESMGLENLARMRKQDIIFAILKQHAK
                     SGEDIFGDGVLEILQDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIR
                     PPKEGERYFALLKVNEVNYDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTAR
                     VLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTE
                     MQRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNT
                     VVPASGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEE
                     FKGTGNMELHLSRKIAEKRVFPAIDYNRSGTRKEELLTTQEELQKMWILRKIIHPMGE
                     IDAMEFLINKLAMTKTNDDFFEMMKRS"
     gene            complement(24582..24716)
                     /locus_tag="MOX77_000676"
     CDS             complement(24582..24716)
                     /locus_tag="MOX77_000676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rho operon leader peptide"
                     /protein_id="HCA3356311.1"
                     /translation="MWFYPSLPVFSRTRSGKIPGSSLIPSCRFSSAYFPVTRQRTDMS
                     "
     gene            complement(24913..25242)
                     /gene="trxA"
                     /locus_tag="MOX77_000677"
     CDS             complement(24913..25242)
                     /gene="trxA"
                     /locus_tag="MOX77_000677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017375425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin TrxA"
                     /protein_id="HCA3356312.1"
                     /translation="MSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILD
                     EIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKE
                     FLDANLA"
     gene            25386..26651
                     /gene="rhlB"
                     /locus_tag="MOX77_000678"
     CDS             25386..26651
                     /gene="rhlB"
                     /locus_tag="MOX77_000678"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase RhlB"
                     /protein_id="HCA3356313.1"
                     /translation="MSKTHLTEQKFSDFALHPQVVEALEKKGFYNCTPIQALALPLTL
                     AGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIDDRKVNQPRALIMAPTRELAVQIHA
                     DAEPLAQATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQ
                     VVVLDEADRMYDLGFIKDIRWLFRRMPPAAQRLNMLFSATLSYRVRELAFEQMNNAEY
                     VEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTKHRCEDIWGHL
                     AADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLP
                     DDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPAIESYIGHSIPVSKYNPEALMND
                     LPKPLRLTRSRPGNGPRRAGAPRNRRRSG"
     gene            26770..28251
                     /gene="gppA"
                     /locus_tag="MOX77_000679"
     CDS             26770..28251
                     /gene="gppA"
                     /locus_tag="MOX77_000679"
                     /EC_number="3.6.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanosine-5'-triphosphate,3'-diphosphate
                     diphosphatase"
                     /protein_id="HCA3356314.1"
                     /translation="MNSTSLYAAIDLGSNSFHMLVVREAAGSIQTLTRIKRKVRLAAG
                     LNNDNHLSAEAMERGWQCLRLFAERLQDIPQPQIRVVATATLRLAVNAGEFIAKAQTI
                     LGCPVQVISGEEEARLIYQGVAHTTGGADQRLVVDIGGASTELVTGTGAQTTSLFSLS
                     MGCVTWLERYFSDRNLAQENFDDAEKAARDVLRPVADELRFHGWKVCVGASGTVQALQ
                     EIMMAQGMDERITLAKLQQLKQRAIQCGRLEELEIEGLTLERALVFPSGLAILIAIFT
                     ELNIQSMTLAGGALREGLVYGMLHLAVDQDIRSRTLRNIQRRFIVDTDQANRVAKLAD
                     NFLKQVENAWHIEPISRELLLSACQLHEIGLSVDFKQAPYHAAYLVRHLDLPGYTPAQ
                     KKLLATLLLNQTNPVDLSSLHQQNAVPPRVAEQLCRLLRLAILFAGRRRDDLVPEITL
                     QALNENLTLTLPGDWLAHHPLGKELIDQESQWQSYVHWPLDVR"
     gene            complement(28291..30315)
                     /gene="rep"
                     /locus_tag="MOX77_000680"
     CDS             complement(28291..30315)
                     /gene="rep"
                     /locus_tag="MOX77_000680"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase Rep"
                     /protein_id="HCA3356315.1"
                     /translation="MRLNPGQQHAVEFVTGPCLVLAGAGSGKTRVITNKIAHLIRGCG
                     YQARHIAAVTFTNKAAREMKERVGQTLGRKEARGLMISTFHTLGLDIIKREYAALGMK
                     SNFSLFDDTDQVALLKELTEGLIEDDKVLLQQLISTISNWKNDLKTPAQAAAGAKGER
                     DRIFAHCYGLYDAHMKACNVLDFDDLILLPTLLLQRNDEVRERWQNKIRYLLVDEYQD
                     TNTSQYELVKLLVGQRARFTVVGDDDQSIYSWRGARPQNLVLLSQDFPALQVIKLEQN
                     YRSSGRILKAANILIANNPHVFEKRLFSELGYGAELKVLSANNEEHEAERVTGELIAH
                     HFVNKTQYKDYAILYRGNHQSRVFEKFLMQNRIPYKISGGTSFFSRPEIKDLLAYLRV
                     LTNPDDDSAFLRIVNTPKREIGPATLQKLGEWAMTRNKSLFTASFDMGLSQKLTGRGY
                     DSLTRFTHWLGEIQRLAEREPVAAVRDLIHGIDYESWLYETSPSPKAAEMRMKNVNQL
                     FSWMTEMLEGNELDEPMTLTQVVTRFTLRDMMERGESEEELDQVQLMTLHASKGLEFL
                     YVYMVGMEEGFLPHQSSIDEDNIEEERRLAYVGITRAQKELTFTLCKERRQYGELVRP
                     EPSRFLLELPQDDLIWEQERKVVSAEERMQKGQSHLANLKAMMAAKRAKS"
     gene            complement(30415..31143)
                     /locus_tag="MOX77_000681"
     CDS             complement(30415..31143)
                     /locus_tag="MOX77_000681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016506088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamide riboside transporter PnuC"
                     /protein_id="HCA3356316.1"
                     /translation="MDFFSINNVMVNIPLGEGGYALSWIEAIGTVFGLLCIWCASREK
                     IINYLFGLINVTLFAAIFFQIQLYASLLLQVFFFAANIYGWYAWSRQNDAREAALKVR
                     WLSCQQTWRLGGICIISILLMTWFIDPVFAMLTRVMLALLQTVGMQVAMPELQPDAFP
                     FWDSTMLVLSIAAMVLMTRKYVENWLLWVIIDVISVVIYAVQGVYAMSLEYVLLTVIA
                     LMGSYSWIKSAQRNGYTSLAARAC"
     gene            complement(31143..31886)
                     /locus_tag="MOX77_000682"
     CDS             complement(31143..31886)
                     /locus_tag="MOX77_000682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001182423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside phosphorylase"
                     /protein_id="HCA3356317.1"
                     /translation="MQPHIRLNTSMTRAKYALLPGDPGRVDRIARFLDKAEILGQNRE
                     FRAARGWYQGVEIVVLSTGIGGPSTAIAIEELRQVGVNTLIRIGSCGALQDSLALGDV
                     IIAHGAVADDGASKTYAPASYPACADPYLTATLIQQAKQMNISAVCGLVRSHDSFYTD
                     REAELDAEWSARGVLGADMETAALMVVGALRGLRTASLLNVVVAHSGCLESSINHYVQ
                     QETLCQQGEERQISLALQAIYFDSLQGEQ"
     gene            complement(31914..32615)
                     /locus_tag="MOX77_000683"
                     /pseudo
     CDS             complement(31914..32615)
                     /locus_tag="MOX77_000683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004127355.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
     gene            32809..33090
                     /gene="ppiC"
                     /locus_tag="MOX77_000684"
     CDS             32809..33090
                     /gene="ppiC"
                     /locus_tag="MOX77_000684"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase PpiC"
                     /protein_id="HCA3356318.1"
                     /translation="MAKMAAALHILVKEEKLALDLLEQIKNGGDFEKLAKKHSICPSG
                     KKGGHLGEFRQGQMVPAFDKVVFSCPVLEPTGPLHTQFGYHIIKVLYRK"
     gene            complement(33182..34657)
                     /gene="ilvC"
                     /locus_tag="MOX77_000685"
     CDS             complement(33182..34657)
                     /gene="ilvC"
                     /locus_tag="MOX77_000685"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HCA3356319.1"
                     /translation="MANYFNTLNLRQQLAQLGKCRFMGRDEFADGASYLQGKKVVIVG
                     CGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLV
                     VNLTPDKQHSDVVRSVQPLMKDGAALGYSHGFNIVEVGEQIRKDITVVMVAPKCPGTE
                     VREEYKRGFGVPTLIAVHPENDPKGEGMAIAKAWAAATGGHRAGVLESSFVAEVKSDL
                     MGEQTILCGMLQAGSLLCFDKLVAEGTDPAYAEKLIQFGWETITEALKQGGITLMMDR
                     LSNPAKLRAYALSEQLKEIMAPLFQKHMDDIISGEFSSGMMADWANDDKKLLTWREET
                     GKTAFETAPQFEGKIGEQEYFDKGVLMIAMVKAGVELAFETMVDSGIIEESAYYESLH
                     ELPLIANTIARKRLYEMNVVISDTAEYGNYLFSYACVPLLKPFMAELQPGDLGSAIPE
                     GAVDNAQLRDVNDAIRSHAIEQVGKKLRGYMTDMKRIAVAG"
     gene            34822..35709
                     /gene="ilvY"
                     /locus_tag="MOX77_000686"
     CDS             34822..35709
                     /gene="ilvY"
                     /locus_tag="MOX77_000686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional activator IlvY"
                     /protein_id="HCA3356320.1"
                     /translation="MDLRDLKTFLHLAESRHFGRSARAMHVSPSTLSRQIQRLEEDLG
                     QPLFVRDNRTVTLTEAGEELRVFAQQTLLQYQQLRHTLDQQGPSLSGELHIFCSVTAA
                     YSHLPPILDRFRAEHPSVEIKLTTGDAADAMEKVVTGEADLAIAGKPETLPGAVAFSM
                     LENLAVVLIAPALPCPVRNQVSVDKPDWSTVPFIMADQGPVRRRIELWFRRHKISNPQ
                     IYATVGGHEAMVSMVALGCGVALLPEVVLENSPEPVRNRVMILERSDEKTPFELGVCA
                     QKKRLHEPLIDAFWKILPN"
     gene            complement(35712..36053)
                     /locus_tag="MOX77_000687"
     CDS             complement(35712..36053)
                     /locus_tag="MOX77_000687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HCA3356321.1"
                     /translation="MIAKTDSDFRHVTPSGGNVFADLGFHKQDAEKFYADSLNEIENT
                     LAIKQQLMEEITLWITQNQMKQAEVATVLHISRPRVSDVVNKKCSKFTIDALVNMLSR
                     IGKPVRVMVGP"
     gene            complement(36050..36367)
                     /locus_tag="MOX77_000688"
     CDS             complement(36050..36367)
                     /locus_tag="MOX77_000688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HCA3356322.1"
                     /translation="MGSSLEDLLAFPITVRKAVGYQLHKIQYGIEPDDWKPFSEIGAG
                     VNEIRIRNNNGIYRVMYVANFAEALYVLHSFQKQTQQTSQHDKNIARTRYNRVVQQRR
                     NSL"
     gene            complement(36648..38192)
                     /gene="ilvA"
                     /locus_tag="MOX77_000689"
     CDS             complement(36648..38192)
                     /gene="ilvA"
                     /locus_tag="MOX77_000689"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase, biosynthetic"
                     /protein_id="HCA3356323.1"
                     /translation="MAESQPLSVAPEGAEYLRAVLRAPVYEAAQVTPLQKMEKLSSRL
                     DNVILVKREDRQPVHSFKLRGAYAMMAGLTEEQKAHGVITASAGNHAQGVAFSSARLG
                     VKSLIVMPKATADIKVDAVRGFGGEVLLHGANFDEAKAKAIELAQQQGFTWVPPFDHP
                     MVIAGQGTLALELLQQDSHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEAEDSA
                     CLKAALEAGHPVDLPRVGLFAEGVAVKRIGDETFRLCQEYLDDIITVDSDAICAAMKD
                     LFEDVRAVAEPSGALALAGMKKYIAQHNIRGERLAHVLSGANVNFHGLRYVSERCELG
                     EQREALLAVTIPEEKGSFLKFCQLLGGRMVTEFNYRFADAKHACIFVGVRVSQGLEER
                     KEIITQLCDGGYSVVDLSDDEMAKLHVRYMVGGRPSKPLQERLYSFEFPESPGALLKF
                     LHTLGTHWNISLFHYRSHGTDYGRVLAAFELGDHEPDFETRLHELGYECHDESNNPAF
                     RFFLAG"
     gene            complement(38195..40045)
                     /gene="ilvD"
                     /locus_tag="MOX77_000690"
     CDS             complement(38195..40045)
                     /gene="ilvD"
                     /locus_tag="MOX77_000690"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HCA3356324.1"
                     /translation="MPKYRSATTTHGRNMAGARALWRATGMTDSDFGKPIITVVNSFT
                     QFVPGHVHLRDLGKLVAEQIEASGGVAKEFNTIAVDDGIAMGHGGMLYSLPSRELIAD
                     SVEYMVNAHCADAMVCISNCDKITPGMLMASLRLNIPVIFVSGGPMEAGKTKLSDQII
                     KLDLVDAMIQGADPKVSDDQSNQVERSACPTCGSCSGMFTANSMNCLIEALGLSQPGN
                     GSLLATHADRKQLFLNAGKRIVELTKRYYEQDDESALPRNIANKAAFENAMTLDIAMG
                     GSTNTVLHLLAAAQEAEIDFTMSDIDKLSRKVPQLCKVAPSTQKYHMEDVHRAGGVLG
                     ILGELDRAGLLNRNVKNVLGLTLPQTLEQYDITVTQDEAVKKMFRAGPAGIRTTQAFS
                     QDCRWDSLDDDRAAGCIRSLEYAYSKDGGLAVLYGNFAENGCIVKTAGVDDSILKFTG
                     PVKVYESQDDAVEAILGGKVVEGDVVVIRYEGPKGGPGMQEMLYPTSFLKSMGLGKAC
                     ALITDGRFSGGTSGLSIGHVSPEAASGGTIALIEDGDTIAIDIPNRSIQLQLSEAEIA
                     ARREAQEARGDKAWTPKNRQRQVSFALRAYASLATSADKGAVRDKSKLGG"
     gene            complement(40202..41131)
                     /gene="ilvE"
                     /locus_tag="MOX77_000691"
     CDS             complement(40202..41131)
                     /gene="ilvE"
                     /locus_tag="MOX77_000691"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain-amino-acid transaminase"
                     /protein_id="HCA3356325.1"
                     /translation="MTTKKADYIWFNGEMVRWEDAKVHVMSHALHYGTSVFEGIRCYD
                     SHKGPVVFRHREHMQRLRDSAKIYRFPVSQSIDELMEACRDVIRKNNLTSAYIRPLVF
                     VGDVGMGVNPPPGYTTDVIIAAFPWGAYLGAEALDQGIDAMVSSWNRAAPNTIPTAAK
                     AGGNYLSSLLVGSEARRHGYQEGIALDVNGYISEGAGENLFEVKDGVLFTPPFTSSAL
                     PGITRDAIIKLAKELGIEVREQVLSRESLYLADEVFMSGTAAEITPVRSVDGIQVGEG
                     RCGPVTKRIQQAFFGLFTGETEDKWGWLDPVNS"
     gene            complement(41149..41412)
                     /gene="ilvM"
                     /locus_tag="MOX77_000692"
     CDS             complement(41149..41412)
                     /gene="ilvM"
                     /locus_tag="MOX77_000692"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 2 small subunit"
                     /protein_id="HCA3356326.1"
                     /translation="MMQHQVNVSARFNPETLERVLRVVRHRGFQVCSMNMEAATDAQN
                     INIELTVASPRSVDLLFSQLSKLVDVAHVAICQSAATSQQIRA"
     gene            complement(41409..43055)
                     /locus_tag="MOX77_000693"
     CDS             complement(41409..43055)
                     /locus_tag="MOX77_000693"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001012636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 2 catalytic subunit"
                     /protein_id="HCA3356327.1"
                     /translation="MNGAQWVVHALRAQGVKTVFGYPGGAIMPVYDALYDGGVEHLLC
                     RHEQGAAMAAIGYARSTGKTGVCIATSGPGATNLITGLADALLDSVPVVAITGQVSAP
                     FIGTDAFQEVDVLGLSLACTKHSFLVQSLAELPRIMAEAFEVANAGRPGPVLVDIPKD
                     IQLASGELEPWFTTVDNEATFPQADVEQARQMLEQAKKPMLYVGGGVGMAKAVPALRK
                     FIAVTQMPVTCTLKGLGAVEADYPYYLGMLGMHGTKAANFAVQECDLLIAVGARFDDR
                     VTGKLNTFAPNASVIHMDIDPAEMNKLRQAHVALQGDLNSLLPALQQPLKIDAWRQSC
                     AELRAEHAWRYDHPGETIYAPLLLKQLSERKPADSVVTTDVGQHQMWSAQHMTYTRPE
                     NFITSSGLGTMGFGLPAAVGAQVARPNDTVICISGDGSFMMNVQELGTVKRKQLPLKI
                     VLLDNQRLGMVRQWQQLFFQERYSETTLTDNPDFLMLASAFGIPGQHITRKDQVEAAL
                     DTMLASEGPYLLHVSIDELENVWPLVPPGASNSEMLEKLS"
     gene            complement(43058..43108)
                     /locus_tag="MOX77_000694"
     CDS             complement(43058..43108)
                     /locus_tag="MOX77_000694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356328.1"
                     /translation="MNNSIKFCFSRFTTGM"
     gene            complement(43195..43293)
                     /gene="ilvL"
                     /locus_tag="MOX77_000695"
     CDS             complement(43195..43293)
                     /gene="ilvL"
                     /locus_tag="MOX77_000695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ilv operon leader peptide"
                     /protein_id="HCA3356329.1"
                     /translation="MTALLRVISLVVISVVVIIIPPCGAALGRGKA"
     gene            43645..43845
                     /locus_tag="MOX77_000696"
                     /pseudo
     CDS             43645..43845
                     /locus_tag="MOX77_000696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462790.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium chelatase"
     gene            complement(43919..44971)
                     /locus_tag="MOX77_000697"
     CDS             complement(43919..44971)
                     /locus_tag="MOX77_000697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001544402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HCA3356330.1"
                     /translation="MAVRKLTTGKWLCECYPAGRSGRRVRKQFATKGEALAFERHTME
                     ETESKPWLGESVDRRTLKDVVELWFKLHGKSLTAGQHVYDKLLLMVDALGNPLATDLT
                     SKMFAHYRDKRLTGEIYFSEKWKKGASPVTINLEQSYLSSVFSELSRLGEWSYPNPLE
                     NMRKFTIAEKEMAWLTHEQIVELLADCKRQDPILALVVKICLSTGARWREAVNLTRSQ
                     VTKYRITFVRTKGKKNRSIPISKELYEEIMALDGFNFFTDCYFQFLSVMEKTSIVLPR
                     GQLTHVLRHTFAAHFMMSGGNILALQKILGHHDIKMTMRYAHLAPDHLETALRFNPLA
                     TLPSGDKVAAAVGITP"
     gene            complement(45160..45351)
                     /locus_tag="MOX77_000698"
     CDS             complement(45160..45351)
                     /locus_tag="MOX77_000698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001513672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356331.1"
                     /translation="MLGKVFFVVLSCSLLLNPLTTYARNYPCSGKKGGVSHCTSDGKF
                     VCNDGTISKSKKICTKNSR"
     gene            complement(45367..45936)
                     /locus_tag="MOX77_000699"
     CDS             complement(45367..45936)
                     /locus_tag="MOX77_000699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001047328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage repressor protein CI"
                     /protein_id="HCA3356332.1"
                     /translation="MNLEKGGRGAIERMVEAYGFKTRQALCDHLGISKSTLATRYMRD
                     SFPAEWVIQCALETGTSLNWLTTGHGSKQTSGNTNTMEVAKYVLSDGALREDGFYIFD
                     KGFLPSTFKKPFVITDNNSEFICDKEFDDIRDGKWVISIDGEVTIRDITRLPGGRIFV
                     EGGNRAFECKIEDIEIIGKIISLTVKYVK"
     gene            46062..46283
                     /locus_tag="MOX77_000700"
     CDS             46062..46283
                     /locus_tag="MOX77_000700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001247707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="regulator"
                     /protein_id="HCA3356333.1"
                     /translation="MRPNISITLTTPHVTIERYSELTGLSIDTINDMLADGRLICHRL
                     RKDKKREKVMINIAAMTVDALSECNLNLN"
     gene            46316..46825
                     /locus_tag="MOX77_000701"
     CDS             46316..46825
                     /locus_tag="MOX77_000701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage regulatory CII family protein"
                     /protein_id="HCA3356334.1"
                     /translation="MFDYQVSKHPHFDEACRAFALRHNLVQLAERAGMNVQILRNKLN
                     PAQPHLLTAPEIWLLTDLTEDSTLVDGFLAQIHCLPCVPINEVAKEKLPHYVMSATAE
                     IGRVAAGAVSGDVKTSAGRRDAISSINSVTRLMALAAVSLQARLQANPAMASAVDTVT
                     GLGASFGLL"
     gene            46833..47129
                     /locus_tag="MOX77_000702"
     CDS             46833..47129
                     /locus_tag="MOX77_000702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000956176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2724 domain-containing protein"
                     /protein_id="HCA3356335.1"
                     /translation="MLTKEPSFASLLVKQSPAMHYGHGWIMGEDGKRWHPCHSQDELL
                     SELTTRKRRKSKCMQRKVKWFISFVTEGRVIQYLKMICSVVIRRCRAMAVTFSR"
     gene            47247..47588
                     /locus_tag="MOX77_000703"
     CDS             47247..47588
                     /locus_tag="MOX77_000703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5347 domain-containing protein"
                     /protein_id="HCA3356336.1"
                     /translation="MAINGAAATVPLSPGERLNGLNHIAELRAKVFGLNIESELERFI
                     KDMRDPRDINNEQNKRALAAIFFMAKIPAERHSISINELTTDEKRELIKAMNHFRAVV
                     SLFPRRLTMPN"
     gene            47656..47889
                     /locus_tag="MOX77_000704"
     CDS             47656..47889
                     /locus_tag="MOX77_000704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2732 domain-containing protein"
                     /protein_id="HCA3356337.1"
                     /translation="MRNIETLSTKTGPDDAGLNILLTEARLEERRARAEAMVARLDSL
                     ACHITSRQLTHVEAAELLRVTAEAIQNEAQEIH"
     gene            47889..48116
                     /locus_tag="MOX77_000705"
     CDS             47889..48116
                     /locus_tag="MOX77_000705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraR/DksA family transcriptional regulator"
                     /protein_id="HCA3356338.1"
                     /translation="MADAMDLVQQRVEEERQRHIRAARAKTPGVSRVLCIECEAPIPP
                     ARRRAIPGVQLCITCQEIAELKGKHYNGGAV"
     gene            48113..48970
                     /locus_tag="MOX77_000706"
     CDS             48113..48970
                     /locus_tag="MOX77_000706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000104187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HCA3356339.1"
                     /translation="MSTILKWAGNKTAIMSELKKHLPAGPRLVEPFAGSCAVMMETDY
                     PSYLVADINPDLINLYKKVAADCESFISRARVLFEIANREVAYYNIRQEFNYSTEITD
                     FMKAVYFLYLNRHGYRGLCRYNKSGHFNIPYGNYKNPYFPEKEIRAFAEKAQQATFIC
                     ASFDETLAMLQVGDVVYCDPPYDGTFSGYHTNGFTEDDQYHLASVLEYRSSEGHPVIV
                     SNSDTSLIRSLYRNFTHHYIKAKRSIGVSAGESKSATEIIAVSGARCWVGFDPSRGVD
                     SSAVYGVRA"
     gene            48967..51381
                     /locus_tag="MOX77_000707"
     CDS             48967..51381
                     /locus_tag="MOX77_000707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000017528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication endonuclease"
                     /protein_id="HCA3356340.1"
                     /translation="MSHADMNNCSGFNEAAAAFSWNSPKKAINPYLDLAEVAPVSALS
                     NLITLYAADNEQEQLRREALSDQVWERYFFNESRDPVQREMEQDKFISRAKLAHEQQR
                     FNPDMVILADVNAQPSHISRPLMQRIEYFSSLGRPKAYSRYLRETIKPCLERLEHVRD
                     SQLSTSFRFMASHEGLDGLLILPEMSQDQVKRLSTLVAAHMSMCLDAACGDLYATDDV
                     KPEEIRKTWEKVAAETLRLDVIPPAFEQLRRKRNRRKPVPYELIPGSLARMLCADWWY
                     RKLWKMRCEWREEQLRAVCLVSKKASPYVSYEAMMHKREQRRKSLEFFRSHELVNEDG
                     DTLDMEDVVNASSSNPAHRRNEMMACVKGLELIAEMRGDCAVFYTITCPSRFHSTLNN
                     GRPNPTWTNTTVRQSSDYLVGMFAAFRKAMHKAGLRWYGVRVAEPHHDGTVHWHLLCF
                     MRKKDRRTITALLRKFAIREDREELGNNTGPRFKSELINPRKGTPTSYIAKYISKNID
                     GRGLAGEISKETGKSLRDNAEYVNAWASLHRVQQFRFFGIPGRQAYRELRLLAGQAAR
                     QQGDKKAGAPVLDNPRLDAILAAADAGCFATYIMKQGGVLVPRKYHLIRTAYEINEEP
                     TAYGDHGIRIYGIWSPIAEGKICTHAVKWKMVRKAVDVQEAAADQGACAPWTRGNNCP
                     LAENLNQHEKDKSADGDTRTDITCMDDKELHDYLHSMGKKEHRELAARLRLVKPKRRK
                     DHKQRITEHQRQQLVYELKSRGFDGSEKEVDLLLRGGSIPSGAGLRIFYRNQRLQEDD
                     KWRDLY"
     gene            51535..51723
                     /locus_tag="MOX77_000708"
     CDS             51535..51723
                     /locus_tag="MOX77_000708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356341.1"
                     /translation="MQDYFLESLKLQRIDFFLKLVAASECSDEEKGLALQWVSELTDE
                     LMAKIRSHEYSRSMDVIS"
     gene            complement(51791..52090)
                     /locus_tag="MOX77_000709"
     CDS             complement(51791..52090)
                     /locus_tag="MOX77_000709"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356342.1"
                     /translation="MKRITFSFTLVAIIIALAGCALPDKDGDFGAYVHTCQQYAYGKS
                     YAFENRDFAYKVCKDAAKLWSDEVPGYVIRQIQLHPEIPSEEIKYAAMAGSLGNN"
     gene            complement(52199..53077)
                     /locus_tag="MOX77_000710"
     CDS             complement(52199..53077)
                     /locus_tag="MOX77_000710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001251691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356343.1"
                     /translation="MAMSLSCQLILLGLALFFYDWDRDMKKLTGVIAFALLLTACDKP
                     KIDASSDQSMKESIQKVRESLPADKKAQFDDAVKVVAFSQINMRELMQAGTSSGDVYE
                     TKIKSALEGKTGDEVINYAQTIRLEREKREKEQALQEIKELEAKQTSATQAAEKMKAF
                     KVERSRFYFQKEDYGNDQPILDISVENGTDKAVARVFFKGVIASPGRSVPWFSDVFNY
                     KISGGLEPGEKANWKLAPNRYSDWGKLKVPADAIFTVTVIGLEDADGKSIYGDAEFSE
                     RDADRLNQLRDKYLSK"
     gene            53691..54605
                     /locus_tag="MOX77_000711"
     CDS             53691..54605
                     /locus_tag="MOX77_000711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001146827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356344.1"
                     /translation="MPYQLVELSPVANDLEQLGTKEKFWFYFSDDTVNLQLFKYSRLG
                     TGEHWSEKCAAELCHLLNIPHASYDLARYNGRFGVVTQNIIPSGFRMVMGNEVLHSST
                     FDYPGPLQAGEKPVRVREHTVTRVLGCLDRESIKPPPSVYDLTGLNAADVFCGFLMLD
                     ALVSNQDRHHENWAIMLNNETGEQFLCPTYDHAASLGREMLDDERNERLNTKDKNRQI
                     PCFVRKARSELFKAKTDKKPLLTVEAFQHAVEGRVAARDHWLGKLSVLTEDSITDVFN
                     QVPSSCISDSARRFATLMVMENRRRLLE"
     gene            54602..55342
                     /locus_tag="MOX77_000712"
     CDS             54602..55342
                     /locus_tag="MOX77_000712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000185756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIRAN domain-containing protein"
                     /protein_id="HCA3356345.1"
                     /translation="MTNTNSVYVAWQAPDTRDWHVVGNLQERKSGYVFRYTKGALKST
                     KFTKFSGMSDVRETYVSEELFPLFKNRLLSPRRPEYPSFIKWLGFEEDKVNPIDILAR
                     SGGLRSTDQLQIFKKIDVDSDGNFEHFFFLHGLGYLNSLANARVSELKPGQILRLCLD
                     LQNEYDGDAVVVRADKPAEIVGYCPRYLSNDIKKMLLDDPKSITLTVEKISDDAPHNY
                     RLLCKLSGVLSQACQSTLIPQDEFEPIE"
     gene            complement(55377..56414)
                     /locus_tag="MOX77_000713"
     CDS             complement(55377..56414)
                     /locus_tag="MOX77_000713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001419999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HCA3356346.1"
                     /translation="MGKRKKNRAAAMNQIQHKSQTSAEAFSFGDPVPVLDRRELLDYV
                     ECVQMDRWYEPPVSFDGLARTFRAAVHHSSPIAVKCNILTSTYIPHPLLSQQAFSRFV
                     QDYLVFGNAYLEKRTNRFGEIIALEPALAKYTRRGLDLDTYWFVQYGMTTQPYQFTKG
                     SIFHLMEPDINQEIYGLPGYLSAIPSALLNESATLFRRKYYINGSHAGFIMYMTDAAQ
                     NQEDVNNLRNAMKSAKGPGNFRNLFMYSPNGKKDGLQIIPLSEVAAKDEFLNIKNVSR
                     DDMMAAHRVPPQMMGIMPNNVGGFGDVEKASRVFVRNELMPLQKRLQEMNDWLGKEAI
                     QFNTYSLDIVP"
     gene            complement(56414..58180)
                     /locus_tag="MOX77_000714"
     CDS             complement(56414..58180)
                     /locus_tag="MOX77_000714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase ATPase subunit family protein"
                     /protein_id="HCA3356347.1"
                     /translation="MNTTLTPADLDPRRQAMLLYFQGYRVARIAEMLGEKVATVHSWK
                     KRDKWGDYGPLDQMQLTTAARYCQLIMKEHKEGKDFKEIDLLARQSERHARIGKFNNG
                     GNEADLNPNVANRNKGPRRQPEKNVFTDEQIEKLEEIFHSSMFNYQRHWWEAGKTNRI
                     RNLLKSRQIGATFYFAREALIDALLTGRNQIFLSASKAQAHVFKQYIIDFAKEVEVEL
                     KGDPMVLPNGATLYFLGTNARTAQSYHGNLYLDEYFWIPKFQELRKVASGMAIHKKWR
                     QTYFSTPSSLTHSAYPFWSGALFNRGRNKADKVDIDLSHNNLAPGLLCADGQYRQIVT
                     VEDAVRGGCNLFDLDQLRMEYSPDEYQNLLMCEFVDDLASVFPLSELQACMVDSWEVW
                     TDFHALALRPFGWREVWIGYDPAKGTQNGDSAGCVVVAPPAVPGGKFRILERHQWRGM
                     DFRAQADAIKKLTEQYNVTYIGIDSTGVGHGVYENVKAFFPAVREFVYNPNVKNALVL
                     KAYDIISHRRLEFDAGHTDIAQSFMAIRRATTASGNRPTYEASRSEEASHADLAWATM
                     HALFNEPLQGESANTSNIVEIF"
     gene            58323..59156
                     /locus_tag="MOX77_000715"
     CDS             58323..59156
                     /locus_tag="MOX77_000715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPO family capsid scaffolding protein"
                     /protein_id="HCA3356348.1"
                     /translation="MTVKAKRFRIGVEGATTDGREIQREWLEQMAASYNPAVYTALIN
                     LEHIKSYLPDSTFNRYGKVTALFAEEITEGPLAGKMALYADVEPTESLVELVKKGQKL
                     FTSMEVSPKFADTGKAYLVGLAATDDPASLGTEMLTFSASAAHNPLANRKQNPANLFT
                     AAEETVIELEEIQEDKLSLFARVTALFTKKEQSDDARFSDVHKAVELVATEQQNLSAR
                     TEKSLSEQEERLSELETALQAQQTAFNELVNKLSHEDSRQDYRQRATGGNAPADTLTN
                     C"
     gene            59173..60231
                     /locus_tag="MOX77_000716"
     CDS             59173..60231
                     /locus_tag="MOX77_000716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein, P2 family"
                     /protein_id="HCA3356349.1"
                     /translation="MKKNTRFAFNAYLQQLARLNGVAVEELSSKFTVEPSVQQTLEDQ
                     IQQSAAFLTLINVTPVTEQSGQLLGLGVGSTIAGTTDTTAKEREPVDPTLMVDVEYKC
                     EQTNFDTVLTYAKLDLWAKFQDFQVRIRDAIVKRQALDRIMIGFNGVKRAKTSNRSEN
                     PLLQDVNKGWLQKIREDAPDHVMGSTTTGGETTPGAVKVGKGGEYANLDAVVMDAVNE
                     LIDVVYQDDDDLVVICGRELLSDKYFPLVNKEQENSEKLAADMIISQKRMGGLQAVRA
                     PFFPPNALLITRLDNLSIYWQEGTRRRSVIDNPKRDRIENFESVNEAYVVEDYRCAAL
                     VENIQIGDFSAAAAEAGA"
BASE COUNT        14760 a        16073 c        15405 g        14010 t
ORIGIN      
        1 tctaaacctt gttccgctca atgggcattc ttcgaatgta ggctggataa ggcgcgttag
       61 cgccgccatc cggcacagta tcgctctaaa gccataatca tattgataag aataatgacc
      121 acacatgtga gcattaacgc ggtaaaaaac aaaaaggcga taccgtacaa tccccatccc
      181 aggtcataga gagaatggta attgtcgcag gagatgatca catccaggcc ggggcatact
      241 tttccccatc gcccccagta agacgcatcc cagagttgca aactggccat gctggcgcat
      301 agcgagagca ggcacccagc ggatataaaa cagaataact tatttataag aatgaagccg
      361 aggctgacca tcgccatgac tatccctaac aaaatgaacg catctgccac ctcaaacctc
      421 ctcctgtaaa ccaaatgcgg aggtcacggt aacgaagttg ggtgaagtta atgtgaagcg
      481 gtgaacgccg gccgggcagc gttgcccggc gcagcactta cgaaaaatac tgctgcaata
      541 gcggcgcgtc atgatcctgg tttgctggcg gcacggtgtt gataggctgc gtacggaatg
      601 ggatcacctg cgcgcggcca tcggttttca ctatctggta gaactgcggc aggttgaagt
      661 tgataaagct ggagccatac gtgaagcgat cgtgcgatga cgaatagaag cgactgacgt
      721 cgcgcaccag ttcttccttg ctaccctcgc agtggtgata cacttccgcc cggttacttt
      781 catccagaat ataaatatta aagcctttct catcgcccgt ttcttcaaag aagaactgga
      841 taatcccttc gctggcgaag ccatccacca ctgacggcaa tttcacctgg ttggtttcca
      901 cctgtaccga cagcccgtgc agcttgttat gcgaaatcgc gccgtagaat tcgatagcgt
      961 tctccagctt ctgcaccgag acattcaagc gttcgaagaa tagtccccac gtctgcccgg
     1021 aaacccgcag cgccttgaag cgaccggtct cctgacgggt gctggaaaga cgtagctcga
     1081 tacattcgga gaccagttgc tgcacgcggg tgcgaatcag accgcgaaga tgctgactgt
     1141 aacagaacac ctccacgcta tccggcggcg cggcatcctg gtgcattttc cccagaatcg
     1201 ttttcagcgc ttcgatcatc gcctgctcgc cgttaaagtg cagagtacgc acttcgttcc
     1261 acgagttgcg atataacaag tcgatactgc ctatcagaca gttttgctct tcgccaaagc
     1321 tgaaaacgtc cagcttacgg aagtcaaaat gaaccacttt attgcgaaac gccgccgtcg
     1381 ggtcatattc gaggttaacg ataatcgcca gatggcgaat ttcacagggg ctgtagagcg
     1441 ctttcggcgt tggagcaggc aagcgcagcg ggaaatggtg cgaaacatcg gcgaccatct
     1501 cctgcaactt aggcaggtcg acaataccgt tgcccttaat aaacagatgc gttcgcgacg
     1561 tcagcaggcc gttgaaccac gcccacgcga ccagcttatt aagataacgg ttatattcca
     1621 gcggctgatg gctgatgatg gaatccatgt tcggcgcgcg gttgtagaga taccagcctg
     1681 aacggttggc acgtcccggc ggcacatgga taaaggttaa attcggctcg gacagatccg
     1741 gcgatatctg cgggttcacc agcgtgactt tacccggcaa cgcttcaaac gccgcgtaca
     1801 gcttacgcgt cagtacgccg atatcctgcg ggctggcact cacgctgagg ttgttgcgcc
     1861 gcgcaaagcg aatcagatta cgatagcttt gcatcattgc gtcgagcaat tcgttgtggg
     1921 cttcgcgcac ctgatcgatt ttccagtttg cgcgattatc gagcatggtc agacgcgcgt
     1981 cgtcccatcc ccactcgctg accaactggc ttaatacttc ccgacgccag cctacgcagg
     2041 cgcgctcgcg acttaatttc tcgcacactt tcaggtaaaa gcagcggcgg actaaatcca
     2101 gccgcgtcgg atcttcaatc gccgtcaggt attcagtgac ccgttccagc atcatgcagt
     2161 agggatcgag tccaaacgat acgatttcac cgtcatgcag acgttgttta atatctttcg
     2221 ccagcagacg tgggttgggg tattcccatg aataggcttc cagcaacagc gttttcagca
     2281 ccgctttgta cggcgagtca atgctcttgt atagctgcca caggctggcg ccaaagtact
     2341 cttcggcgga gagcgagctt aagcccccca aatccagcca ttcgtttggc gttaatacgc
     2401 cctgcgcgta gagcgtcatg acatagtcgt cgtaatgctc ttcttcgtcg cacggcacca
     2461 tactccacag gatacgcttc ccggccaggc gcacagcggt acgataaaac tcatcaagca
     2521 acaggatatg ctgcgtagaa ccacagtctt ccccgcccag actgccgctt tcgttatggc
     2581 ggaaacggtt ctcgtcaatc aggaagaagc tcacctcaac gccaagcgag gcggcccagc
     2641 tttccagcag gctacactta cgttgcagca actgacgctc ttcgccgtcg agccaggact
     2701 gatggcacac ccagatatcc aggtcggacg agcagctctg cccgaccgag gaggtgctgc
     2761 ccatggtgta aacgccggta atcggcaact cgcccttcgg cggatcctgc ggcgtcatac
     2821 cgcggtacag ctcaagttcg ttcagatagt ggcgttgggt ttcatcaggc gtgtagaagc
     2881 aaataccgct gggaacgtta ccatcaaggt aacccggcat cagtggatgg tgatagtgca
     2941 ataatgtcgg cagaagactg taaacctgct gaaaagcggg tcccatggca gcaagcgcgc
     3001 gatccacacg cagttgattt atggcatcca gtctctgttt cagagtctca atatagaggt
     3061 acaagacgta tcgcctgatg ttgctacccg tcatggtgca ggtcaatact tcaccgtcgc
     3121 cattcgggat aaaccgtatg tcaaaaataa ccgttaccct ttctcgcctg catattttta
     3181 tctaataccg acgaaaaaat ggtctaaaac gtgatcaatt taacaccttg ctcattgacc
     3241 gtaaagaaag atgcgctaca tacaagtgta gcaccgttcg ctgcgtgtaa attcttaaat
     3301 acgggctggc ggtttctcgt cattattcac tgtcattgac gacactgcgc cttatcctct
     3361 cactcacggt gaccggaaaa ctaacatact ctctataagg atgttaggat ggtcaatgat
     3421 tgataatgac ggtaacaagc atgttagaca atgttttaag aattgccaca cgccaaagtc
     3481 cccttgcgct ttggcaggca cattatgtca aagacgcatt gatggcaacc catccgggac
     3541 tgacggtaga actggtgccg atggtcacac gcggcgacgt gattctcgat actcccctgg
     3601 cgaaagtggg cggtaaggga ctgtttgtta aagagcttga aatcgcgctg ctggaaaaac
     3661 gcgctgatat cgccgtgcac tctatgaaag acgttccggt ggccttcccg gacggtctcg
     3721 gtctggtgac catttgcgag cgcgaagatc cacgcgacgc gtttgtctcg aataaatatc
     3781 acagtctgga cgatctgccc gcgggtagta tcgtcgggac gtccagtttg cgtcgtcagt
     3841 gtcaactggc ggaacgccgt ccggatctca ttatccgttc gttgcgcggc aacgtcggca
     3901 cacgtctcgg caagctggat aacggcgact atgacgccat tatcctggcc gtggccggtc
     3961 tgaaacgctt aggtctggag tcgcgcattc gcacagcctt gccgcctgac gtttcgcttc
     4021 ctgccgtagg ccagggcgct gtcgggattg agtgtcgtct tgacgacgcg cgaacacagg
     4081 cgctgctcgc accgttgaat cactcgcaaa ccgcgctgcg cgtaacggcg gaacgtgcta
     4141 tgaacacccg cctggaaggc ggttgtcagg tgccgattgg cagctatgca gaaatcatca
     4201 acggtgaaat ttggctacgc gcgctggttg gcgcgccgga cggttcggtg atggtgcgcg
     4261 gcgaacgtcg tggttctccc gagcaggcgg agcaaatggg catctcgctt gcagaggaac
     4321 tgctggaaaa cggcgcgcgc gcgattctga cggaagttta taacggcgag acgcccgcat
     4381 gagtattctg atcacccgcc cctctcccgc aggggaagcg ttagtgagcc gtctgcgcgc
     4441 actggggcag gtggcctgga gttttccact gattgaattt gtcgccggtc gggagctacc
     4501 caccctggcc gaccgcctgg caacgctgac ggaaaacgat ctggtttttg ccctttcaca
     4561 gcactccgtc gcctttgctc acgcccagct ccagcgggat ggacgaaact ggcctgcgtc
     4621 gccgcgctat ttctcgattg gccgcactac ggcgctcgcc cttcataccg ttagcgggtt
     4681 cgatattcgt tatccattgg atcgggaaat cagcgaagcc ttgctacaat tacctgaatt
     4741 acaaaatatt gcgggcaaac gcgcgctgat tttgcgtggc aatggcggcc gcgaactgct
     4801 gggcgaaacc ctgacagttc gcggagccga agtcagtttt tgtgaatgtt atcaacgatg
     4861 tgcgaaacat tacgatggcg cggaagaagc gatgcgctgg catactcgcg gcgtaacaac
     4921 gcttgttgtt accagcggcg agatgttgca acgactctgg tcgctgactc cccagtggta
     4981 tcgtgagcac tggttactac gctgtcggct attggtcgtc agtgagcgtc tggcgcacct
     5041 cgcccgggaa ctgggctggc aagatattaa ggtcgctgat aacgccgaca acgatgcgct
     5101 gttgcgcgca ttacaataac tctcataatg ggatgccata atgacggaac aagaaaaatc
     5161 ctccgccgtg gttgatgaga ccagggagac cgtggaaacc acgccacagc cagttaatac
     5221 cgagaaaaaa agtaagaacg gcgccgcgct ggtattaagc gcggtggcga tcgcgattgc
     5281 cctggcggca ggtattgggc tttatggctg gggaaaacag caggcaaccg cgcaaacgga
     5341 aaccagcgat gcgctggcga cgcaactgac cgccttgcaa aaggcgcagg agagccaaaa
     5401 agcggagctg gaagggatta tcaaaaaaca agcggcgcag ttagatgacg cgaatcgcca
     5461 acaggcggcg ctggcgaaac agcttgatga agtacaacaa aaagtcgcca ccatttccgg
     5521 cagcgatgct aaaacctggc tgctggcaca ggctgatttc ctggtgaaac tcgccggacg
     5581 caagctgtgg agtgatcagg acgtcactac cgccgctgcg ctgctcaaaa gcgctgacgc
     5641 cagtctggcg gatatgaatg accccagcct gattaccgca cgacgcgcga ttactgacga
     5701 tatagccagc ctgtcatccg ttgcgcagat cgactacgac ggcattattc tcaagctcaa
     5761 tcagctctct aaccaaattg ataacctgcg tctggcggat aacgataccg atggttcgcc
     5821 gatggattct gacagcagcg agctgtccag ctcgctaagc gaatggcgcg ttaacctgca
     5881 aaaaagctgg cagaacttta tggacagctt tattaccatt cgccgccgcg atgataccgc
     5941 cgtaccgctg ttggcgccca accaggacgt ctatttacgc gaaaatattc gctcccgcct
     6001 gttagtcgcc gcgcaggccg tgccacgcca tcaggaagaa acataccgtc aggcgctgga
     6061 taacgtttcg acctgggttc gcgcttatta cgatactgac gacgccgcga caaaagcctt
     6121 cctggaggag gtcgataaat taagccagca aaatatcacg atggatctgc cggaaactct
     6181 gggaagccag gcgattcttg aaaaactgat gcaaacccgc gtgcgtaatc tgctggcgca
     6241 accgacagtc tctacggcag cgcctgccac gcagacagac gctccggcag ccgcgccgca
     6301 aggagaataa tgatgctaaa agtattattg ctctttgtgt tgttgctcgc gggtatcgtg
     6361 gtcggcccga tgatagccgg tcaccagggc tatgtgttaa tccagaccga taactacaac
     6421 attgaaacca gcgtcaccgg cctggcgatc attctcatcg tcgctatggt ggtgctattc
     6481 gccattgagt ggttactacg ccgtctgttt cgtaccggcg cgcacacccg cggttggttt
     6541 gccagccgta aacgccgtcg cgcccgcaag cagaccgaac aggcgctgct gaagctggcg
     6601 gagggcgact atcagcaggt tgaaaagctg atgtcaaaaa atgccgacca tgctgaacaa
     6661 ccggtggtaa attatttgct ggcggcagaa gcggcgcagc agcgcggcga tgaagcacgc
     6721 gctaatcagc accttgaacg tgcggcagag ctggcgggga acgacaccat cccggtcgag
     6781 atcacgcgtg tgcgcttaca gctggcgcgc aatgaaaatc acgcagcgcg tcacggcgtg
     6841 gacaaactgc tggaggtcac gccgcgtcac ccggaagttc tgcgtctggc ggagcaggcc
     6901 tatattcgca ccagcgcatg gagttcttta ctggatatca tcccatccat ggcgaaagcg
     6961 cacgtcggcg atgaagcgca tcgcgccatg ctcgaacaac aggcgtggat aggactcatg
     7021 gatcaggcgc gtgccgagca gggcagcgaa ggattacgca cctggtggaa aaaccaaagc
     7081 cgtaaaaccc gccatcaggt ggcgctgcag gtcgcgatgg ccgagcatct aatcgagtgt
     7141 gacgatcatg atatggcgca gcagattatc atcgacggtc tgaaacgcca gtatgacgat
     7201 cggctggtgc tgcccattcc tcgcctcaga accaataatc cggaacaact ggagaaagtg
     7261 ctgcgccagc aaatcaagac ggtaggcgat cgcccgctgt tatggagcac gctcggccag
     7321 tcgctaatga aacacggtga atggcaggag gcgaccctgg ctttccgcgc cgcgctgaaa
     7381 caacgcccgg acgcgtatga ttatgcctgg cttgccgatg cgcttgatcg actgcatcaa
     7441 ccggaagagg ccgccgccat gcggcgcgac ggcttgatgc tgacattaca gaacaatccc
     7501 ccgcagtaat tccctcttgc ccggtggcgc ttcgcttacc gggcttaccg cctacacaaa
     7561 atcattcggg atgcataaaa aaacgcctgc ccggttaagg ggcaggcgtc aaaacaggtc
     7621 tgtatgacaa cataaagggg tgcttcactc aacgttgtgt ccagggtgtt tgatgaggcg
     7681 taagcgacat ctgtcagtgg acgataagca ccgtaaacgg ctctgcatca ttcctgagtt
     7741 tatgaggcca gaaggcgaac ataagagatg gaatgagcat ctacccgtac attattgcac
     7801 ataacgtgcc atctttgcac cgctaaaaaa caggcgcagg cattaaaaaa acgtagagaa
     7861 ttcacgcgat tgttatcccc ccgccgctgg cgaggtttta gcgtgtcgcc cggcggagac
     7921 agaacaggat gctttttata aagtgattat aaatcaatag attattcgtc accgaatagc
     7981 gacaaatgaa gtctgggata tcgccaataa accataatgg caacacgtgc gggataaggg
     8041 gttgaaaatg aacagaaaac aaaaaacccc gccgaagcgg ggctcaaaat tggtcggcga
     8101 gagaggattc gaacctccga cccactggtc ccaaaccagt tgcgctacca agctgcgcta
     8161 ctcgccgata tactgctttt ttgaattttt agttcaattc attgagtcgt ggtgcgaggg
     8221 gggggacttg aacccccacg tccgtaagga cactaacacc tgaagctagc gcgtctacca
     8281 attccgccac cttcgcgttt cacaactcta tattaatggg gtggctaatg ggattcgaac
     8341 ccacgacaac tggaatcaca atccagggct ctaccaactg agctatagcc accactgaaa
     8401 ctttttacgc ggtattaaac caccgcagct caagcaccta aataaatggt acgcccgaca
     8461 ggattcgaac ctgagacctc tgcctccgga gggcagcgct ctatccagct gagctacggg
     8521 cgcttagcgc cgttgcgggg gtggataata cggacttcac accccgctgt ccagtgcctt
     8581 tttaaataaa atgcgcgttt ggttatgctt tgcgcatttt ggcgcttatt cccccacctt
     8641 gtgggcggtt ccgtgacgat tcaggccgaa aactttgtag accagcgtga cggccagcag
     8701 gaagatgacg ccgacaaaca gcgacatgcg cgtatcttca ttaaagtaca tgccgattaa
     8761 aacgcaaacc agaaacgcca tcgtcaaata gttcgcccac ggaaacataa tggaacgaaa
     8821 aggatgatcc gcaatcgctt ctttatgcgc ccgacgaaag cgcagttggc taatcagaat
     8881 gacaaaccac ggcaccatcc ccggcagtac gctggcgcta taaacgtaaa caaagacgcg
     8941 ctgcggattg gggataatgt agttcaggca agaacctacc agcaaaatca aaatagagag
     9001 cgccacgccc gcgaccggca cgccgtggcg agagaccttc gcaactgccg ccggcagttg
     9061 acggtttttc gccagcgcgt aaagcatacg cccacagcta tacattccgc tgttacagcc
     9121 ggagagcgcc gccgtcagca cgacaaagtt gataatgcct gccgcggcgg tgatgccgat
     9181 tttcgcgaag gtgagcacaa aggggctgcc gttgctgcca atctcattcc acgggaaaat
     9241 ggtgacgatc acgaaaatcg cgccaacata aaaaatcagg atacgccaca gcactttacc
     9301 caccgcgcta cgcaacgtca cctgcggatt cttcgcttca ccggcggtaa taccgatcaa
     9361 ctcaacccct tgataagagg ccaccacgat acataatgcg gtcagaaagc ctttccagcc
     9421 gccggcaaaa aagccgccat gctcggtcag attaccaaag ccaatcgcct ggccgccgtt
     9481 accaaagccg aagaaaatca cccccaggcc gatgatgatc atcacaataa tcgtggtgac
     9541 tttgatcatc gcaaaccaga actcgatttc accatacagg cgcaccgcag ccagattcgc
     9601 caacgcgacc agtccgacgg caatcagcgc cggtatccac tgcgccatct ccggaaacca
     9661 gaactggacg tagaccccaa tggcggtaat ttccgagatc ccgaccgcca tccacataaa
     9721 ccagtatgac caggcggtaa gatagccaaa aaaaggactc atataccggt gggcgtacac
     9781 ggcaaaggag ccggtaacag gttccagaaa gagcatctcc cccatcgaac gcatgatgaa
     9841 aaagacgaac aatccggcga tgatatacgc cagcagcact gacgggcccg cccatttcag
     9901 cgtactggcg gcgcccataa agagtccgac gccgatggtg cccccgaggg caatcaattc
     9961 aatatgacga gcttccagcc cacgctgtag ctccggtttt ttctctgcca taaatcctca
    10021 tgtcgtgttt gcaacggttc cggtagtacc ggttattgtt atgggtacat cgattgttgc
    10081 gaatattttc ttaaatttgg acaaatggca aatgaagcat taaaaaaatg cgcttattgt
    10141 gtaagaaagc atcgattatg ttgtaaatga gcagagccat aagcacagtc cgctgctcaa
    10201 gtcatcagaa gggagaatca gagatcgcca gtatagtgcc agcgaagata gcgcagcaga
    10261 cgcatctggc gggtaatacg cttcggttgc gaaagcagac gatacaacca ctccagcccc
    10321 aggttctgcc atatttttgg ggcgcgtttg acgtgaccgg taaacacatc ataggtaccg
    10381 cccaccccca tatatagcgc atggggatgc acttcccgac aatcgcgcat gagtaattcc
    10441 tgttttggcg atcccatcgc gacggtgaca attttcgcgc cgctggcatg gatacgcgca
    10501 aatagcgcct gacgctgctc cggcgtaaag taaccgtcct ggctacccac aatattgacg
    10561 ttccactgcg tccgcagttt tgcttccgtc tgcgccagca cctcaggctt gccgccgaca
    10621 aaaaataccg gcgtgccttc tttccccgcg cgcgccatta acgcttccca aaggtcggcg
    10681 ccagccacgc gagaaacctg cgcctgcgga aattttttac gtattgaacg caccacgctg
    10741 atgccatcgg catatttaaa ttccgccgct gctatcaacg cgcggacttc cggattatct
    10801 tccgccgtca gcagcttttc ggcgttgatc gccaccaacg tgccttgctt cagttgacca
    10861 tcggcaaaca gataattcag cgcatgtgac atgtcgcgcc agccaatcag aggtaatcca
    10921 cgcagcgagt aaaggggcgc agcggcatta ttggtcatag ttttccatcc atctgtgcct
    10981 gagggagcga agttgtacgt ttatgaatca gtccggcgct atcaaataac cagaacagaa
    11041 gtttagcgac cagcaggctg gcgccaaaaa ccaccaggaa gaaaaccacg cgcgaaacaa
    11101 acgaatccag cccttctcgc gccagcacaa tcatattaaa gatggcgcca aagcagaaac
    11161 tgtgcagaat cgccgcctta tagcgattgg gttcccggtt acccagttca tacagccagt
    11221 cgaaccattt gataatcagc ccgacgacga tcgcgccgag cggaataaac agtgccccgc
    11281 ccatgaccac cagcgatccg ataagcgttg gcgatatcgc caggccagaa tggttgttca
    11341 ggacttccca ggtgaagtaa ttcgcagaat tcagcacgat actgggtcgt cccggccata
    11401 accaggtagg aataaagacg tagaaatcac gcacgatagg ggccagcccc tgaaaatcga
    11461 tattgtggta attttgcaac agcagcgcca gattctccca cggcgaaaag gtatcgcgcg
    11521 tcagataaag aaacgtatag aacgcctcat cgccgctcac atttaatccg tagcgtttga
    11581 gcgccagcca gaacataccg acaatcccca gcacgcccgc cgctgccagc atccacaggc
    11641 tgatccagcc ccgaataatg ccgataaaca ggaagatagc aaacgcaata atgatgttgg
    11701 cgcgcgtgcc gccgacaatc atgtaggtca acagaccaaa cgcgacggtg ctcaccagaa
    11761 agaacagcca cgctttgctg tcctggcgca ggaaatagac caccagcatc gccggaatga
    11821 agaaatagaa gaaccgtttt aacgccacgc cggaaacttc gctggaaaag atctggctgt
    11881 aggagtgtag tcggaacagc aaaaagccgt tatgcataaa gaaaatcgcc acgctcacca
    11941 gcgcgatgcc catcaggatc acccaggtaa ggtgggtttc cacccggttc atggtaaata
    12001 gcggcttgcg tggtacatcc acaacgcgtt tgcgtaaacg cgttttatag gtcacgtaat
    12061 acacgccgta gaaacaggcg gcggataata gagcctgcaa taagatttcc ggcggcgcga
    12121 cgccaacgtc gaaacgaaat accagcacgc tggttagcgg aaaaccaaaa aagaaggtca
    12181 acaaaaaaag caacgaaaag aaaacgttga agttaaaacg cacgcggcgg aattcaaacc
    12241 aagtcagcgt ggcgataaac agcgtagaga gcagccagac caccagcagc ccgctgaatt
    12301 gcattaaact cattcggctt ctcctgcggc gattctcaac gcattatgcc acggttgcag
    12361 gtagttgggg ctaaagaagg tgatgccgct tttatctacc gatgcgagct gacgctgcgc
    12421 ctcgcgcacg acctgctcat taagatcgtc cgtggtaaac aggacgggca gatgctgttc
    12481 cgccatatcc tgccagaaag gattgtcgcg attcaacacg cacgggatat cggcctgaat
    12541 tagcagacac aacgtcccga tcccctgttg gcgggcaaaa ataaaataac cgaggtcgca
    12601 ctggcgcaac agcgcaagat aggcatcaaa ttccattttt tcgctaagaa tttgtagatt
    12661 ttcggcgcta aatagcgcca gaccggcctg acgaacctca tcaatatagg cctggttatt
    12721 ggctggatag cccatcggca ccaccacgtt tatcgtgtcg ccaaactgct gatacaccgc
    12781 ccgtaacgcc gcaatatgtt ggttactgcg atcgccggag ttccctacca aaatggtcaa
    12841 tttccccgca cgttggcgct cttttgccat agcattcaga gaaggatcca tgcgcgtcgg
    12901 gaaatagagc aactcgccgc gtacgcccgg gtgctggcgc gcaaaatagc tgagatcgcc
    12961 gcgcgtcgcg aatacgcccc ctactcgccc ctgcgcgata cgacgaagcg ggtagaaaag
    13021 gcggaatttc agcccgttgg acacttcgta gagatccgcg ccccagatat gccagtaaaa
    13081 ctgggctggc ttaataccgc cgcttaacag cgccagccac agactgatgt tgaactgccc
    13141 gtgaaagaag aatctctgtc gacgatttgc tttcgctttg gcgataaccg cctgcgccag
    13201 cgctttctta ctgccataaa aacgaagcga gagtgccgga cagctttccg tgaagccgtt
    13261 atcttcaccg gcaaccataa attcgcgcgc gtgctcgcct gtggcggcca gcgtatcatt
    13321 gaaaaaccgc agcacggtgt ggttatggtg agggatatcc gatcccagga cgtgaatcag
    13381 tacagtcatg ctcgcctacg ccagagtaaa aatacgccgc aacaaagtga aaaatagaca
    13441 atataggtgg ccatataagc ctgtgccgca cccagcgcgc cgtgagcggg aatcagccag
    13501 tgagcgaacg ccgttaacag aatgaactgg ctaatttcgg ccagaatgta aaatcgcaac
    13561 gacgctttgg caatcaccag ataaccgaaa acataggcgc cgactttcag cacgtcgccc
    13621 actaactgcc aagcgaacag atcgcgcatc gcggtgaatt tggcggaaaa aagcagccag
    13681 atagcaaaat cgcgcaatag ccagacggta aaactcgccg ccgcaaccgc cggtaaaaca
    13741 aatttcagcg cttttaccac ttcacgcgta atgtcctgtt tttccgtcag gcgtgagagc
    13801 gtaggtaaca ggtaaacgct gaaggaggcg gtgataaatt gtagataggc atcagaaata
    13861 ctgctcacgc cctgccagat cccgacatcg ctccagctat agtgcgcggc cagttggttt
    13921 cgcatcatca cataggcgac cggcatcgta acagaggtaa tcagcgccat cagggtaaat
    13981 ttactgagtt gccctgccag accgttgtcc caggagggct tgagatagcg tagcgggacg
    14041 gtgccgcgct taatcagtat tataccggct ggcactacca ccagcgccgg caccagcgcc
    14101 aggccaagca gagcgccttc atagccgccg acacggtagc agagatacca ggcggcgacg
    14161 cccaaaaagc tgccgacaat taacgataag gcattacccg acgcgtcacg aaagcccttc
    14221 attagcgcca gcagcaggtt cgcccaggcg atccccattt gtaccagcgc aaccagacgc
    14281 accagccctt gatagtccgt atgaccgaac agtccctggc taatcggcgc cgccgccagc
    14341 aggaagacca gcgccagcag cgtagagaac cccaatacca tcgcggagga ggttcccacc
    14401 acggtacgta actgcgccgg gtcatcatga tgttgtgcga cgagtttggt aacgccgtta
    14461 aatatcccgg cgccagccaa tacgcccagc acggtaatca tctggcggaa gttacccgct
    14521 tgtccgacgc ccgacggacc gaaagagacg gccagtagtt tcaccaccag cagtccggcg
    14581 ccaattttta ccagcgtact gaccgccgtc cacagggagg ctttagcaag cgacatatca
    14641 ggagaaataa tttagcaagg tagtaatcac cgttcgttga tcgacgggcg caaggttata
    14701 aaacagcggc agacgcaaca aacgttcgct ctcttttgtg gtgtagacat cgtccccgat
    14761 aaactcgccg aatttatcgc ccgccgggca atcatgtagc ggaatgtaat ggaataccgc
    14821 catgatttcc gcctctttca ggaaattaat cagcgcgctg cgatcggcga tatcccgcag
    14881 tttgatgtaa aacatgtggg cattatgccc gcagttttcc ggaatagaag gcagctcaat
    14941 acgcccggcg cgcgccagcg gcgttaacgc atcgtagtaa gtctgccaca gcgacagacg
    15001 ctgttgattg atacgatcgg cggcctccag ttgcgcccac aggtaggcag cctgcagatc
    15061 ggacatcaag taactggagc cgatatcccg ccaggtgtat ttgtccacct gaccacggaa
    15121 gaactggcta cggttggtgc ctttttcgcg gatgatctcc gcgcgttcaa tcagcgtacg
    15181 atcgttgatc agcgtcgcgc cgccttcgcc gccagcggtg taatttttgg tttcatggaa
    15241 gctaaaacag ccgatgtgac cgatcgtccc taacgcgcgc cctttgtacg tggacattac
    15301 gccctgggcg gcgtcctcga caacgaacag attatactta tccgccagcg ccatgatgac
    15361 gtccatttca caagcgacgc cagcgtagtg taccggcacg atagcgcggg ttttatcagt
    15421 aatcgccgcc tcaatcagcg tttcgtcaat attcatcgta tccggacgaa tatcgacaaa
    15481 cacaattttc gcgccgcgca ggacaaaagc gttagcagtg gagacaaacg taaagctcgg
    15541 catgatcact tcatcgccgg gctgaatatc caacaacagg gccgccatct ccaaagacgc
    15601 ggtacaggaa ggcgtcagca acaccttcgc gctgccgaaa tgttgctcca gccactgctg
    15661 gcaacgacgc gtaaagccgc cgtcgccgca cagtttgccg ctgctcattg cagactgcat
    15721 gtattcgagt tcggttccca ccaccggcgg cgcattaaaa ggaatcatgt tgtcacctgt
    15781 ataaccagta cgcagtgctt tcgatgttgg caccgctttg tatgtaacgt ttaagcgcgg
    15841 cggtgttgcc caactgggtc gccacccgca atgttgcttt gccgcgactc tgcgcccaac
    15901 agatcgccgc ctgcataagt tccgctcccg cgccgcgtcc ggccaacagg ccaatgcgca
    15961 cgtcggtatc attcaattcc cgcagcgaga cgtaaccacg gatagcgcct gtctccgtgc
    16021 gaagcaccag gcattggtga tcaaacgtgc cgcgtaccgc attctcaatc cactgggcgt
    16081 aaaaacgggc gctggcgtcg ggcgcatacc acggcgcgcg aaaacgactc tgcgtaaacg
    16141 cctctccggc caactgacgc aaagcaggaa tgtccgtaag atgtgcaatt tccgcgccat
    16201 gctggtcgcg atgccctttt accggcaacg caaaatccac ctcgccttca accaaagaga
    16261 atcccagcga ttgcaacgcc gacagccagg cgatgttttc agccggcact tttgcctgca
    16321 cgcgttgcca tgcctgcagc gcttctggcg ttaattcggg cgctgaggca tcgatacgca
    16381 caatgccgct attcacgcca aagaacgtat tttcccagtg taacggttca atactggcgc
    16441 ggacgggcac ggagcaactc cagtaaatat tggccatagc cggttttttc aagctgactg
    16501 gcggcgcgtt tcaaaccatc atcatccagc cagccgttgc gccaggcaat ctcctccaga
    16561 caggcaattt tgaagccctg gcgcttttcc accgtctgca caaaagtgct cgcctcaatc
    16621 agactgtcgt gggtgcccgt atccaaccag gcgaagccgc ggcccagcag ttcaacggtc
    16681 agcttacctt cctccagata catctggttg atagaagtga tctccagctc gccacgcccg
    16741 gacggtttca cgcgcttcgc atactcgacg accttgctgt catagaaata gaggccggtg
    16801 accgcccagt tagatttagg ctgtttcggc ttttcttcca gcgagagcgc gcgaaaatca
    16861 tcgtcaaact ccacgacgcc aaagcgttcc gggtccatga cctgatagcc aaatactgtg
    16921 gcgccttcgg tacgcgccgc gacctgacgg agtttggggc taaagccctg accaaaaaag
    16981 atattgtcgc ccaatactag gcatgagggt tcaccgttga ggaacgtttc gccaatgata
    17041 aaggcctgcg ccagcccgtc cggactgggc tgctcggcat aatgtaaatc gataccgaat
    17101 gctgcgccgt cgcccaacaa acgctgaaag tcgcgtttat cctccggcgt ggtgatgatc
    17161 aagatctcac gaatgcccgc cagcattagc accgataacg gatagtaaat catcggttta
    17221 tcgtagacgg gcagaagctg ctttgatacg ccgcgcgtaa tgggatgcaa ccgggtaccg
    17281 gaacctcccg ccagaatgat gcctttcatt cgtttctcct ccaggagtaa gagcgcgttt
    17341 cagacctaag cgttcgccct gataactgcc atcctgcacg ggtttccacc aggcctcatt
    17401 ggcgagatac cactgaacgg tttttcgcat cccgctttcg aaggtttcct gcggcgtcca
    17461 gcccagctcg cgggcgattt tcgacgcgtc gatggcataa cgtaagtcat ggccgggtcg
    17521 atcgtcgacg aaggtaatca gatcgtgata attcgccaca ccctgcggtt tttgcggggc
    17581 cagttcctcc aacagagcgc agatcgtcct gaccacatcc agatttttac gttcgttatg
    17641 accgccgata ttatacgttt cgcccaccgc accgttcgtc accacgtgat acaacgcacg
    17701 ggcatgatcc tccacataca gccagtcgcg aatttgctga ccgttgccat agaccggcaa
    17761 tggtttaccc gccagcgcgt tcagaatcat cagcgggatc agtttttccg ggaaatggta
    17821 gggcccgtag ttattagagc agttggtgac aagcgtaggc agaccgtagg tacgtaacca
    17881 ggcgcgtacc agatggtcgc tgctggcttt ggaggcggaa taagggctgc ttggcgcata
    17941 tggcgtggtt tcggtgaaga aatcgtctgc agtatgcaga tcgccataca cttcatcggt
    18001 ggagatatgg tggaagcgga acgccgcttt agcgtccgcg tcaagcgcgg accagtaagc
    18061 gcgagcggct tccagcaagg tgtaagtacc aacgatattc gtttcaataa acgccgccgg
    18121 gccgtcgatg gaacggtcta catggctttc cgccgccagg tgcatcacgc tatcgggctg
    18181 atactgctgg aaaacttgct ccagtgatgc ccgatcgcag atatccacct tctcaaaggc
    18241 gaaacggtcg ctttgcgcca ccgacgccag agacatcagg ttgcccgcat aggtgagttt
    18301 atccaccacc accaccgcgt ctgccgtttc atggatgata tgccgcacca ccgcagatcc
    18361 gataaagcct gcgccgccgg tcaccagaat gcgtttcatc agcgccagac ccctttggta
    18421 tcaaccacat aacgttgatg aaccgcatcg ccgggaatcg ctttaaattc gtcgtgatcg
    18481 accagcatca ccagcacatc ggcggcggcc agcgccgcgt ccagtttcgc cagcgtgcaa
    18541 agtccgtcca attttttcgg caactgacgg atattcggtt cgacgaccag ggtttcgccg
    18601 ctgtgccagc gggcgatact ttgcgcgatc cccatcgccg ggctttcgcg cagatcgtcg
    18661 atattcggct taaaggccag cccaaaacag gcgattttca cttcgctggc gcgtttatcg
    18721 gtggctgcca ggcaatctgc gaccgcggct tttacctgat cgaccaccca gtgcggtttg
    18781 ccgtcattca cttcacgcgc ggtgcgaatc agtctcgcct gctgcggatt ttgcgccaca
    18841 ataaaccacg gatcgaccgc aatgcagtgc ccgccaacgc ctgggcccgg ctgcaaaata
    18901 ttgacgcgcg gatggcggtt cgccaggcgg atcaattccc agacgttaat cccctgttcg
    18961 gcgcaaatca gcgacaattc attcgcaaag gcgatattca catcacggaa gctattttcc
    19021 gtcagcttgc acatctctgc ggtgcgcgag ttggtgacaa cgcattcgcc ctcaaggaaa
    19081 attttgtaca gcgcgctggc gcgagccgaa catactggcg tcataccgcc aatcacgcgg
    19141 tcatttttaa tgagttccac catcacctga cccggcagca cacgctccgg acaataggcg
    19201 atattcacgt cggcctgctc gcccgcctgc tggggaaagg tcagatccgg gcgcatcccg
    19261 gccagccagc cagccatttg ctccgttgcg ccgaccggcg atgttgattc cagaatcacc
    19321 agtgcccctt tttttaatac cggcgcaatg gatttcgccg cggcttccac ataggccatg
    19381 tcagggtcgt gatcgccttt gaatggcgtc ggcacggcaa tcaggtacgc atcggcctcg
    19441 acaggtgtcg tcgtcgcacg cagaaagccg ccttccaccg ccatcttcac cacattgccc
    19501 aacgccggct ccacgatgtg aatttcaccg cgatttatgg tgtctacagc atgttggttg
    19561 atatccacgc cgataacctg cttctggcgg gaagcaaaag cggccgcagt cggtaatccg
    19621 atatacccca gcccaataac agaaatggtc gtaaaactca taacgatacc cgataacttt
    19681 ttaacgcctg taaaatgcgc gcgcatgatt gcccgtcacc ataaggatta tgggcgcggc
    19741 tcatggtttg atattcattt tcgtcgtgca gcagacgcat aacttccgcc acaatgcgcc
    19801 gggagtccgt gccgatcagt cttaccgtac cagcggtaat ggcttccgga cgctctgtgg
    19861 tttcacgcat gaccaatacc ggcttaccta atgacggcgc ttcttcctga ataccgccgg
    19921 aatcggtcag aatgagccag gcgtgattca tcagccagac aaaaggtaag tagtcctgcg
    19981 gctcaatcag taccacgttt tcaacatggc cgaggatacg gttgacaggt tcgctgacgt
    20041 tgggattgag atgcaccgga tagacaattt gcacattctg gttcgcggcg gcaatttccg
    20101 ccagcgcctg gcagatatgc tcaaagccct gaccaaagct ttcacgccga tgaccggtca
    20161 ccaaaatcat cttcttattc gcgttgagga aaggatactg ctcggccagt tcagcctgta
    20221 atgtatcgct cgtcagaacg cgatcgcgta cccagatcag cgcgtcaata acggtattgc
    20281 cagtgacaaa aatgcgctca tccggaatgt tctcccgcaa cagattctgc cgcgagtttt
    20341 ccgtcggcgc aaagtggtac atcgccagat gtccggtcag cgtgcggttt gcctcttccg
    20401 gccaggggga atagagatcg ccggttcgca acccggcttc tacgtgccct accggaattc
    20461 gttgatagaa agccgccagg ctggtagcaa tcgtagtggt ggtatctcca tgaaccagca
    20521 ccacatcagg tttaaaatct gccaggatcg gctttaatct ctccagaatt cggcaggtaa
    20581 tttccgtcaa cccctgtccc ggctgcataa tgttgagatc gtaatcaggc acaatagaaa
    20641 aaagagttaa tacctgatca agcatctccc gatgctgcgc agtaacgcat actttggcct
    20701 cgaaatgagg atctttttcc agcgcatgga ccagaggcgc catcttaatg gcctccggtc
    20761 gtgtaccaaa tacagtcagt actttcacat cgattctctt cgaatagaca gtaggggccc
    20821 agccccctac tgcagaggtg ttgctaaatc gtgcggcgac gggttaaggc aacgcccgca
    20881 ccgattagcg ccccaacgat accccacata atcatcagga aggctcggcg tgggctatca
    20941 cgttttaccg gttcttccgg cgtacgcaaa taacgatagg tctgaaaacg agggtccagg
    21001 gtcggcccca cattaagcgt attcaacatt gcccgatttt gaaagtagtc caaatcgaac
    21061 gcagggccaa ccgcttgcag attttcaaga cgcgcctgca acatagggcg accgagtaaa
    21121 aaaagctctg agtccggtaa ttcatccgcc gggacatctg tcgcgctacg agaaatatta
    21181 tgttgttccg caattttgag cgcctgctca atactgttta cacgacgcga atagatcgct
    21241 ttcgcaacct cttcctgccg tttgacctgg gctttcatct gcacggtacg cgcagcccag
    21301 gcacctttta attcatcatt cagatggctc gccgcccgct ggctggcgaa tgcgacatac
    21361 tgacgcagca gattattggc atccggcgca gtttcagcaa tcagcctcac gttgtcgttg
    21421 atggcgcgtg taaaatcgcc gggcgtaaac tgtatgttat tgatcagttc atcaagcatc
    21481 accgcatcag ctttgctatt cccgaccatt cgctgcttgt aatagtccgt ctgtaaccag
    21541 aaatcgcgac gcgtatccca ggaggcaagt tgcatgatga actctttata cgcttcatcc
    21601 atcaccgagg gcttatcaga agaagcagga tcggtcttaa tatccaggtt gcgcagaaac
    21661 tgctgctggg agtaataacc gcccaacata tttacggttg ggcgatcggt gatcgccgtc
    21721 gcactccact cctgacgagc aaaaaaggta taggctaacg cgataagggc aaatagcagg
    21781 ccaatgccga taatccagaa tttgccagcc cataaagtac gaaacaaccc gcgaatatcc
    21841 agttcatttt cagcgctcac cgcgcgtgcc cccggtaatg gttgtgtcat cgtatcctca
    21901 tttacttggt taagtttggc cggttcttac gttgcctgcg caggcgacgc ttcacacgct
    21961 taataaatct cgccaccttc caggcccgct taatgcagta gccatagagg aagaatgcta
    22021 gcaaaaagag caccaacata acccattcag gaacaaaatg agagtattct gccgttacgc
    22081 ctactcccgc cagaatcgcc gctgcgagcg taataagaac aaatgcctgg cgggaagtaa
    22141 accctgctcg cataaccaaa tgatgaatat gttggcgatc aggggaaaag gggctcatcc
    22201 ctttacgcag acggcgatac ataatcgcca ccatatccat caatggaata gcgataatcc
    22261 atagcgcggt aaccgggctg atagagtgag ttttcccctg cgtcgtttcc agtaagagcc
    22321 agatgacggt aaagccaatc agtgtactac cggcatcacc cataaagact ttataacgcc
    22381 gccccaaaat accgagatta agcataatgt aaggcagaat cgcggcgatc atggcaaagc
    22441 accacattgc cagactagtc tgaccatcaa accataaaat cagccccatc gccgcaaatg
    22501 agacgctgga taacccaccc agcagtccgt caataccgtc caccatattg aaagcgttga
    22561 tcgccgccca tacggcaaac agagtaagga aatagccaaa ggggccaagc actaactccc
    22621 aaggcccaaa gatgtaacca aggctaccta agtgaagttt tgcgataacc atcattacaa
    22681 ccgcaataac agcctgaacc acagcacgaa tttttacact gatatcaaaa cggtcatcca
    22741 tcgcaccaac aaaaaccaat acaccagcgc aaataagata tagcgataag tgcggtatgt
    22801 agtaatccga gaggccaaac ataaagcaga ttcctgcaaa cacagaaatc ccgccgacta
    22861 atgggataac gccctgatgt cgtttacgaa agtttggttt atccactaaa ccaattttta
    22921 tggctacttt tcgcgcaaga aaaataaaaa tggtcgtgaa taaaaaaata ctgattagct
    22981 cagataaagc ggtgagtaac ttcacagtgt atgtgctctc agcatatatc atttccttaa
    23041 agtataatgc gttacgccag ctcctagaag agacctgtta gaacattaca ctttttaccg
    23101 caaacaatgt gtattgtgca tggtgttact ctgtagcgca tatcccgatg accagtttat
    23161 atgacatgac gccaggatga atcgcaaaac aaaaacgcca cgtaaaaacg tggcgttttc
    23221 aggtaaagac caggttatga gcgcttcatc atctcgaaaa agtcgtcatt agttttggtc
    23281 atcgccagtt tgttaatgag gaattccatc gcgtcaatct cacccatcgg atggatgatt
    23341 ttacgcagga tccacatttt ctgcagctct tcctgagtgg tgagcagctc ttctttacgg
    23401 gtaccggaac ggttgtagtc gatagccggg aagacacgtt tttcagcgat cttacgcgag
    23461 agatgcagct ccatgttacc ggtgccttta aactcttcgt agataacttc gtccatcttg
    23521 gaaccggtat cgattagcgc cgtcgcgatg atagtcaggc taccgccctc ttccacgtta
    23581 cgcgccgcgc cgaagaagcg cttcggacga tgcagggcgt tagcatccac accaccggtc
    23641 agtactttac cggaagccgg caccacggtg ttgtaggcac gcgccagacg ggtgatggag
    23701 tcgagcagga tgatgacgtc tttcttgtgt tcaaccagac gtttcgcctt ctcgataacc
    23761 atttcggcaa cctgaacgtg gcgggatgcc ggttcgtcaa aggtagaggc aaccacttcg
    23821 cctttcacca gacgctgcat ctcggttact tcttccggac gttcgtcaat cagcagcacc
    23881 atcagcacgc agtctgggtg gttatacgcg atgctctgcg cgatgttctg cagcagcatg
    23941 gttttacccg ccttcggcgg cgcgacaatc agaccgcgct ggccgcgacc gatcggcgaa
    24001 gccagatcca gaacgcgcgc cgttaagtct tcggtagaac cgttaccacg ctccatacgc
    24061 agacgagagt ttgcgtgcag cggggttaag ttctcaaaga ggattttgtt acgggcgttt
    24121 tccggtttgt cgtagttaac ttcgttaact ttcaacagcg caaaatagcg ttcaccttct
    24181 ttcggcgggc gaatcttacc agaaatggta tcaccagtgc ggaggttgaa acggcggatt
    24241 tggctggggg aaacgtagat atcatcagga ccggcgaggt aggagctgtc tgcagaacgg
    24301 aggaaaccaa atccatcctg caatatctcc agcacaccgt cgccaaagat atcttcgcca
    24361 ctctttgcgt gctgcttcag gatggcaaaa ataatgtcct gcttgcgcat acgggccagg
    24421 ttttccagcc ccatactttc gccgagagtg atcagctcag aaaccggcgt attctttaat
    24481 tcggtaagat tcataatggt gtgagttctt aaacttgggg taaatctcga acttaatgtt
    24541 gtgaatggta tggcagggtc atccatgcct gtttacggct atcaactcat gtctgttcgc
    24601 tgtctggtca caggaaagta cgcagaactg aaacgacaag acggaatgag cgaagagcca
    24661 ggaatctttc cacttctcgt gcgagaaaaa acgggaagtg acggataaaa ccagattcaa
    24721 acttaataag gtatgtttaa ttcgaagtca atactaactt agcacgactc agaccgggcg
    24781 tccagagatc ctgacaattt aagaataacg taaggacaac agacgccacg aaactgcctg
    24841 ataccttaat cattcgtcga atgacagacg cctgaccata cagcgccttt gtcattcgac
    24901 gtataaaagg tattacgcca gattggcgtc gagaaactct ttcaactgac ctttagacaa
    24961 tgcgcctact ttggttgccg ccacttcgcc gtttttaaac agcagcagag tcggaatacc
    25021 gcggatgcca tatttaggcg cagtacctgg gttctggtca atgttcagtt tggcaacggt
    25081 caatttgccc tgatattcgt cagcgatttc atccagaatc ggagcgatca ttttacacgg
    25141 cccgcaccac tctgcccaga aatcaacgag gatagccccg tccgctttga gtacatccgt
    25201 gtcaaaactg tcgtcagtca ggtgaataat tttatcgctc atatataact ccacaggaat
    25261 aagcctggcg tgttggtgta gcattaacca acgaggtgct gatgttaact tcgccaacaa
    25321 aggttgactt tatttcaccg gatacgcttt cgtaaagcaa tagtaagctg atattctacc
    25381 acactatgag caaaacacat ttaacagaac agaagttttc cgacttcgcc ctgcacccac
    25441 aggtggttga agcccttgaa aaaaaagggt tttataattg tacgcccatt caggcactgg
    25501 cccttccgct aacgctggcg ggtcgtgacg ttgcagggca ggcgcaaacc ggtaccggga
    25561 aaacgatggc gtttctgacg tcaacgtttc attatttact ttctcatccc gcgatcgacg
    25621 atcgcaaggt gaaccagccg cgcgcgctga tcatggcgcc gacgcgtgaa ttagccgtac
    25681 aaattcacgc agacgcggag ccgctggcgc aagcgacagg cttaaaatta ggcctggctt
    25741 acggcggcga tggttacgac aagcagctta aagtgctgga aagcggcgtt gatattctta
    25801 ttggtacgac gggccgattg atcgactacg ccaaacaaaa ccacattaac ctcggcgcca
    25861 ttcaggtcgt cgtactcgat gaagccgatc gcatgtacga tttgggcttt attaaagata
    25921 tccgctggct gttccgtcgt atgccgccgg ctgcgcagcg tctgaacatg ttgttctccg
    25981 ccaccctgtc ttatcgggtt cgcgagctgg cgtttgaaca gatgaacaac gccgaatatg
    26041 ttgaagtgga accggagcaa aagaccggcc accgcattaa agaagagctt ttctacccct
    26101 ctaatgaaga gaaaatgcgt ttactgcaaa cgctgatcga agaagagtgg ccggatcgcg
    26161 ccattatttt cgccaacacc aagcatcgtt gcgaagatat ctggggacat ctggcggcag
    26221 atggccatcg tgttggtctg ctgaccggcg acgtcgcgca gaaaaagcgc ctgcggattc
    26281 tggatgagtt cacccgcggc gatctggata ttcttgtggc gaccgatgtc gcggcgcgcg
    26341 ggttgcatat ccccgccgta acgcacgtct ttaactacga tctgccagac gattgtgaag
    26401 actatgttca ccgtatcggt cgtaccggtc gcgctggcgc cagcggacat tccatcagcc
    26461 tggcttgtga agagtatgcg ctgaatctgc ccgctattga gagctatatc ggccactcga
    26521 ttccggtcag caaatacaat ccggaagcgc tcatgaacga tctgcccaag ccgttgcgtc
    26581 tgacgcgttc gcgtcctggc aatggtccgc gccgcgctgg cgctccgcgt aatcgtcgtc
    26641 gttcaggtta agaaaagtta tgccatacac aaaatcattt agcctgtatc aaggcggcaa
    26701 gaaaacaaat cccgatgagc ttaggaagag tacgcagcca acacggatac aggttgaagg
    26761 atgaagtgta tgaattccac ctcgttgtat gccgccattg atctcggttc caatagtttt
    26821 catatgctgg tcgtgcgcga ggcggcggga agcatccaga cgctgacccg aataaaacgc
    26881 aaggtgcgtc tggccgcggg tctgaacaac gacaaccacc tttcagccga agcgatggaa
    26941 cgcggctggc aatgcctgcg tctgtttgct gaacgtttgc aggatatccc gcagccacaa
    27001 atccgcgtgg ttgccaccgc aacattgcgt ctcgccgtca atgcaggtga atttatcgcg
    27061 aaagcgcaga ctatccttgg ttgtccggtg caggttatca gcggcgaaga agaggcgcgg
    27121 ctaatttatc agggggtcgc tcataccacc ggcggcgcag atcagcgact ggtggtggat
    27181 atcggcggcg ccagcactga actggttacc ggcactggcg cgcaaaccac gtcgctgttt
    27241 agcctgtcga tgggctgcgt aacgtggctt gaacgctatt ttagcgatcg taatctggcg
    27301 caagaaaact ttgatgatgc ggagaaagcc gcgcgcgatg tactgcgtcc ggtcgccgat
    27361 gaactgcgtt ttcatggctg gaaggtctgc gtgggtgcct ccggcaccgt acaggcattg
    27421 caggaaatca tgatggcgca ggggatggac gagcgcatta cgctcgccaa actgcagcag
    27481 ctaaaacaac gcgcgataca gtgcgggcgt ctggaagagc tggaaatcga aggcctgacg
    27541 ctggagcgcg cgctggtttt cccaagcggg ctggctattc taatcgcgat atttaccgag
    27601 ctgaacatcc agagcatgac gctggcaggc ggcgcgttac gcgaagggct ggtgtatggg
    27661 atgttgcatc tggcggtaga tcaggatatc cgcagccgca cgctgcgaaa cattcagcgt
    27721 cggtttatcg tcgataccga tcaggcaaat cgtgtggcga agctggcaga taacttcctc
    27781 aaacaggtag aaaatgcctg gcatattgaa cctatcagtc gtgaactgtt gcttagcgct
    27841 tgccagttgc atgagatcgg tctgagcgtt gattttaaac aggcgcccta tcatgccgcc
    27901 tatttagtac gccatttgga tctgcctggc tatacgcccg cgcagaaaaa gttgctcgcc
    27961 accctcttac tgaatcagac caatccggtc gatctctctt cgcttcatca gcaaaacgcg
    28021 gtaccgcccc gtgttgcgga acagctatgc cgtttgctgc gactggcgat tctttttgcc
    28081 ggtcgccgtc gtgacgatct ggtaccagaa attacgctac aggcgctaaa tgaaaatctg
    28141 acgttaacct tgcctggcga ctggctggcg catcacccgc tgggtaaaga gttgattgat
    28201 caggaaagcc agtggcaaag ctatgtacac tggccgctgg acgttcgcta accgtagtct
    28261 gattgccgga tgacgcttcg cttatccggc ctacgatttc gctcgctttg ccgccatcat
    28321 ggctttcaga ttagccaggt gactttgccc tttttgcatt cgctcctcag cgcttaccac
    28381 tttgcgctcc tgctcccaga ttaaatcatc ctgcggcagt tctaacagga agcgactggg
    28441 ttccgggcgc accagttccc catactgacg gcgctcttta cataatgtaa aggtgagctc
    28501 tttctgcgca cgagtgatcc cgacataggc cagccgacgc tcttcctcaa tattgtcttc
    28561 gtcaatgctg ctttgatgcg gcaaaaatcc ttcttccatt cccaccatat agacatacag
    28621 gaattccagt cctttcgacg catgaagcgt catcaactgt acctgatcca gctcttcttc
    28681 gctctcgccg cgctccatca tatcgcgcag cgtaaagcgt gtaaccacct gggtgagcgt
    28741 catcggctca tcgagttcgt tgccttccag catctcagtc atccagctaa agagctggtt
    28801 aacgtttttc atacgcattt ccgccgcttt ggggctcggc gaggtttcgt acaaccagga
    28861 ttcatagtca ataccgtgga tgagatcgcg cacggcggcg acaggctcac gttcggccag
    28921 acgctggatt tcccccagcc agtgggtaaa acgcgtcaat gaatcgtaac cacgtccggt
    28981 cagcttctgg ctaagcccca tatcaaagct ggcggtaaac aggcttttat tacgcgtcat
    29041 tgcccattca cccagctttt gcagagtggc cggaccgatt tcgcgttttg gcgtattcac
    29101 gatgcgcagg aaagcgctgt catcatccgg gttggtcaac acccgcagat aggccagcaa
    29161 gtctttaatc tccggacggg agaaaaatga ggtgccgccg gaaattttgt acggaatgcg
    29221 gttctgcatg aggaattttt caaatacccg cgactgatga ttcccgcgat acagaatggc
    29281 gtaatccttg tactgggtct tgttcacaaa gtgatgggca atcagttcgc cggtaacgcg
    29341 ctcagcttca tgctcttcat tgtttgcgct taacactttg agttccgcgc cgtaaccgag
    29401 ttcggaaaag aggcgctttt caaagacgtg cggattgttg gcgatgagaa tatttgccgc
    29461 tttcaggatg cggcccgaag aacgatagtt ttgctccagc ttaatcacct gcagcgccgg
    29521 aaaatcctgg ctcagtaaca ccaggttttg cggacgcgcc ccgcgccagg agtagataga
    29581 ctgatcgtca tcgcctacga ccgtaaagcg cgcgcgttgc ccaaccagca gcttaaccaa
    29641 ctcatactgg ctggtgttag tatcctgata ttcatccacc agcagataac gaattttatt
    29701 ctgccagcgc tcgcgcacct cgtcattgcg ttgcagcagc agcgtcggca gcaaaatcaa
    29761 atcatcaaaa tcgagaacgt tacatgcctt catatgggcg tcgtaaagcc cgtagcagtg
    29821 ggcaaaaata cgatcgcgtt cacctttcgc ccccgccgct gcctgtgcag gcgttttgag
    29881 atcgtttttc cagttggaga tcgtggagat cagctgttgc aacagaacct tgtcgtcttc
    29941 gatcaggcct tcggtcagct ctttgagcaa ggcgacctgg tcggtatcgt caaacaatga
    30001 aaagttcgat ttcatcccca gcgcagcgta ctcgcgctta ataatatcca gccctagcgt
    30061 atgaaaggtg gagatcatca aaccgcgcgc ttccttacgg ccgagcgtct gcccgacacg
    30121 ttctttcatc tcacgcgctg ccttgttggt aaacgtcacc gccgcaatat gccgggcctg
    30181 atagccgcat ccgcggatca ggtgggcgat tttattggta attacgcgag ttttaccaga
    30241 acccgctcct gccagcacca ggcagggtcc ggtgacgaat tcgacagcgt gttgttggcc
    30301 aggatttaaa cgcatgggaa tagtgctcaa tcttcgaacg ggggagggat tgtagcagaa
    30361 agcgaggccc agagaagacc aggctgcttt ttcaggcagc ctggaaaagg tcaatcagca
    30421 ggctctggcg gcaagcgacg tatagccatt acgctgtgcg ctcttgatcc aactgtaaga
    30481 acccattagc gcgatcaccg tcagcagaac atactcaagc gacatcgcat aaacgccctg
    30541 tactgcatag atcacgacgc taattacatc aataatcacc cacagcagcc agttttccac
    30601 gtacttgcgg gtcatcagca ccatcgccgc aatcgacaac accagcatgg tggaatccca
    30661 gaacgggaac gcgtccggct ggagttcagg catcgccacc tgcataccta ccgtttgcag
    30721 cagagcgagc ataacgcggg tcaacatagc gaagaccgga tcgataaacc acgtcatcag
    30781 cagaatgcta ataatacata tgccccccaa cctccatgtt tgttgacaag aaagccagcg
    30841 tactttcaga gcggcttccc gggcgtcatt ctgccggctc catgcgtacc agccgtaaat
    30901 attcgccgca aagaaaaaca cctgaagtag caagctggca tacagttgaa tctgaaaaaa
    30961 gatggcggca aacagagtga cgttaatcaa gccaaacagg taattaatga ttttttcccg
    31021 gctggcgcac cagatgcaca ataagccaaa gacggtaccg atagcctcaa tccacgatag
    31081 cgcataccca ccctcgccga gaggaatgtt gaccattaca ttgttaatgc tgaaaaagtc
    31141 catcattgct ctccttgcaa actatcgaaa taaatggcct gaagcgccag agaaatctgg
    31201 cgctcttcac cttgctggca caaggtttcc tgctgaacat aatggttaat gctgctctcc
    31261 agacagccac tatgcgcgac gaccacgttt agcaacgacg cggtacgcag cccacgtaac
    31321 gctcccacca ccatcagcgc ggcggtttcc atatccgcgc cgagaactcc cctggccgac
    31381 cattcggcat ccagttcagc ttcgcgatcg gtataaaaac tgtcatggct gcgcaccagc
    31441 ccgcaaacgg cagagatgtt catctgtttc gcctgctgta tcagcgtggc ggtaagataa
    31501 gggtccgcac aggccggata actggcgggc gcataggttt tgctggcgcc gtcgtcagcc
    31561 accgcgccgt gggcgatgat cacatcgccc aacgccagcg agtcctgcaa cgcgccgcaa
    31621 ctaccgatac ggattagcgt gttgacgcca acctggcgta actcctcaat ggcgatagcg
    31681 gttgacggtc cgccgattcc cgtggagagc acgactattt caaccccctg gtaccagccg
    31741 cgcgccgcgc gaaactcccg gttttgcccc agaatctcag ccttatcaag aaaacgggcg
    31801 attctatcca cccgcccggg atcgccgggc aaaagcgcat atttcgcgcg ggtcatgctt
    31861 gtgttaagcc gaatatgggg ttgcatctcc ctctccttat tgttctgaga ggttcagatt
    31921 tccgcctcct gtttgagttt ttcaggagcc agtaaaatga tccgctcacc gtcggtatcg
    31981 ataatgttca gcgatttcag atcgtgcagt atccggttga tactgcgcgt cgtcgccgca
    32041 aattcctgac caagattctg cttatcaagc aaaatagtgg ttgattcata ttgttgataa
    32101 cgcagccata atgcctggca tacgcgctga tgcagcgagt acaaattgtc gctactggcc
    32161 tttttcgaca actggtaata ctgttggctg aaaaaccgca gcattcgctg gttaaagtgg
    32221 ttatccagcg tcagccagcg gcaaaaatgt gcttgcggca ggctaagtag ctgtacattg
    32281 ccgacggcta cgacagaaca gatgtaatgc cgcgactcaa atatctctag ctcgcccagc
    32341 atgtctcctt tgccataacg cgcctgccgg taacggcgtc catcttcagc ttcgtaaaaa
    32401 acatccactt cgccggccac gatgagcgaa aattgctagc atgtttcccc ctggcggcag
    32461 ataagcgcgc cgcgggaaat gtcgtcaaat cgccagcact gcatgatttc caacgggcag
    32521 tatttgagta attcatagag cactgggtcg cgtacgacct ggcgtagccc taaaagccag
    32581 tcgtctggaa attctgcgtt tttcattatg ttcatggtat ctcgcccctt gtcagaaagg
    32641 acaggaccgt cgtcccgccc atccgaaata cgcccgctaa aaatgccgct tatctcccgg
    32701 ttcattaaat caggcgggac atctgtcctg taatggcgaa gagtatatgt ctgacggcct
    32761 aaggagtgat aaagtgacgg ccaatctttg cgacgtgaga acacaataat ggcaaaaatg
    32821 gcagcagcac tgcatattct tgtaaaagaa gagaaactgg ctttagatct tctggagcaa
    32881 attaaaaacg gcggcgattt tgagaagctg gcgaagaagc attctatctg cccatccggt
    32941 aaaaaaggcg gtcatttagg cgaatttcgt cagggccaga tggttccggc attcgataaa
    33001 gtagtctttt cctgcccggt actggagcca accggcccac tgcataccca gttcggttac
    33061 cacatcatta aggtattgta tcgtaaataa aaagccgggt ggcggctacg ccttacccga
    33121 cctacatcgt ctgcttgatt ttgtcggtcg ggtaagcgct agcgccaccc gacaaggtat
    33181 atcaacccgc taccgcaata cgcttcatat ccgtcatata gccgcgcagt ttcttaccta
    33241 cctgctcaat cgcatgacta cgaatcgcgt cgttcacgtc gcgaagctgt gcgttgtcta
    33301 ccgcgccttc cgggatagca ctacccagat cgcccggttg caattccgcc ataaacggtt
    33361 tcagtagcgg tacgcaagcg taagagaaca ggtagttacc gtattctgcg gtatcggaga
    33421 taaccacgtt catttcgtac aggcgcttac gggcgatggt gttggcaatc agcggcaact
    33481 cgtgcagtga ttcgtagtaa gcggattctt cgatgatgcc ggaatcgacc atggtttcga
    33541 acgctagctc aacgcccgct ttcaccatcg cgatcatcag aacgccttta tcgaagtact
    33601 cctgctcgcc gattttacct tcaaactgcg gcgcggtttc gaacgcggtt ttaccggtct
    33661 cttcacgcca ggtcagcagt ttcttatcgt cgttcgccca gtcagccatc atgccggaag
    33721 agaattcgcc ggagatgatg tcatccatgt gtttctggaa cagcggcgcc ataatctctt
    33781 tcagctgttc ggacagcgcg taagcacgca gtttcgccgg gttagacaga cggtccatca
    33841 tcagggtgat gccgccctgc ttcagcgctt cggtgatggt ttcccagccg aactgaatca
    33901 gtttttcggc gtatgccggg tcggtgcctt ctgccaccag cttgtcgaag cacagcagag
    33961 aaccggcctg cagcataccg cacagaatgg tctgctcgcc catcaggtca gatttcactt
    34021 ccgccacgaa agaagattcc agtacgcccg cacggtgacc gccggtggcc gcagcccagg
    34081 ctttagcaat cgccatacct tcgcctttcg gatcgttttc cgggtgaacg gcgatcagcg
    34141 ttggcacacc gaagccacgc ttgtattctt cacgtacttc ggtgcccgga cacttcggtg
    34201 ccaccatcac cacggtgatg tctttacgga tctgctcgcc cacttcgacg atgttgaagc
    34261 cgtgggagta acccagcgct gcgccgtctt tcatcagcgg ctgtacagaa cgtacaacgt
    34321 cggagtgctg tttgtccggc gtaaggttaa ccaccaggtc agcctgcggg atcagctctt
    34381 cgtaggtgcc tactttgaag ccgttttcgg tcgctttacg ccaggaggcg cgcttctcag
    34441 caatagcttc tttacgcagg gcgtaggaaa tatccagacc ggagtcacgc atgttcaggc
    34501 cctggttcag accctgagcg ccacagccga cgatgaccac ttttttaccc tgcaggtagc
    34561 tcgcgccgtc ggcgaattcg tcgcggccca taaagcgaca tttacccagc tgcgccagct
    34621 gctggcgcag attcagtgta ttaaagtagt tagccatgat ggtgtactcc gtgatgttgt
    34681 gttgtcgcgc ttattgttcg gtttacagat tgctatctgt gcgaatgaac ccacattaca
    34741 acaggaaatt tattgcggaa attgatatat tcacaacgtt atgttgcggt ttatgcaacg
    34801 tcaaaaaccg gaggtctgtc tgtggattta cgcgatctaa aaaccttcct gcatctggcg
    34861 gaaagccgcc attttggccg cagcgcgcgg gcgatgcatg tcagtccttc caccctttcc
    34921 cgacagattc agcggctgga agaagacctc ggccagccgc tgtttgtgcg cgataaccgt
    34981 acggtcacgc tgaccgaagc gggtgaagag ctgcgagtgt ttgcccaaca gacgcttttg
    35041 caatatcagc agttgcgcca taccctcgat cagcaggggc cgtccctttc cggcgaactc
    35101 catatcttct gttcagtgac tgcggcgtac agccacctgc cgccgattct cgaccgtttt
    35161 cgcgccgaac acccttctgt tgaaatcaaa ttgacgaccg gagacgccgc cgatgcgatg
    35221 gaaaaggtgg taacgggaga agcggacctg gcaatcgccg gcaaaccaga aacgctgccc
    35281 ggcgcggtgg cgttttcgat gctggaaaat ctggcggtgg tgctgatcgc cccggcgctg
    35341 ccctgcccgg tgcgtaatca ggtgtcggtt gataagcccg actggtcaac ggtgccgttt
    35401 atcatggccg atcagggacc ggtacgccgc cgcattgagc tgtggtttcg ccgccataaa
    35461 atcagcaatc cgcagattta cgccaccgtc ggcggtcacg aagcgatggt ctcaatggtg
    35521 gcgctgggct gcggcgtggc gctgctgccg gaagtggtgc tggaaaacag tccggagccg
    35581 gtgcgcaacc gggtgatgat tttagaacgc agtgatgaaa aaacgccgtt tgagcttggc
    35641 gtctgcgcgc aaaaaaagcg gctgcatgag ccgctaattg atgcgttctg gaagatttta
    35701 ccgaattagt tttacggccc taccattacc cgaacaggct tcccaatacg gctaagcata
    35761 ttcaccagag catcaatggt gaatttgctg catttcttgt tgacgacatc cgaaacgcgc
    35821 ggtcgggata tatgcaaaac tgtagcaacc tcggcttgct tcatctggtt ttgcgtaatc
    35881 cagagggtaa tttcttccat tagctgttgt ttaatggcta acgtgttttc gatttcattc
    35941 agggaatcag cgtaaaactt ttctgcgtcc tgcttatgaa accccaaatc agcaaaaaca
    36001 ttaccgccag atggcgtcac atggcgaaaa tcactatcag ttttggcaat cacaagctgt
    36061 ttctccgttg ttgcaccacc cggttataac gcgttctggc gatgttttta tcatgctgac
    36121 tggtttgttg cgtctgtttt tggaaactat gcaaaacgta gagtgcttct gcaaaattag
    36181 cgacatacat aacgcgatag ataccattgt tgttacgaat acgaatttca tttaccccag
    36241 ccccaatttc tgaaaacggt ttccagtcat cgggttcaat tccatactga attttgtgaa
    36301 gctgataacc gactgcttta cgtaccgtta tgggaaaagc caggagatcc tccagagaag
    36361 atcccaccca tcgaatttct ttttcattgg agagagctcg ggtgagtaac ataacatctt
    36421 tgtgtataaa attttataca ttgtttttag caggtgcaag tgatggcggt gctaatgata
    36481 tggagccgag tttcaccaca agcagattgg gcgccttctg gaaaacgtct cgcaaaatga
    36541 aatgagtgga tgctccgggc tggcaggaaa gcccaataac tgagggaaga taatatctgg
    36601 atattaggcc cactttactt tgtgggcccg aaaaactaaa cgctgaatta acccgccaga
    36661 aagaaccgga acgccgggtt attgctctca tcatggcatt catagcccag ttcatgcagc
    36721 cgggtttcga aatccggctc atgatcgcct aactcgaacg ccgccagcac gcggccataa
    36781 tcggtaccgt ggctgcggta atggaatagc gaaatattcc agtgcgtgcc aagcgtatga
    36841 aggaatttga gcaacgcgcc gggcgactcc ggaaattcga aactatacaa acgctcctgt
    36901 aatggcttgg aggggcgccc gccgaccata tagcgcacat gcagcttcgc catttcatcg
    36961 tcggagagat ccactacgct ataaccgccg tcgcacagtt gggtgataat ctcttttcgt
    37021 tcctccagcc cctgactgac gcgtacgccg acaaaaatac aggcatgttt cgcgtcggca
    37081 aaacggtagt taaattcggt gaccatacgc ccgccaagca actggcagaa tttgaggaag
    37141 ctcccctttt cttccggaat ggtcaccgcc agtaacgctt cgcgctgttc ccccagctcg
    37201 cagcgttcag acacatagcg caagccgtgg aagttgacgt tggcgccgga aaggacgtgc
    37261 gccaggcgtt cgccgcgaat attgtgctgg gcgatatatt ttttcatccc cgccagcgcc
    37321 agcgcgccgg acggctccgc caccgcacgc acatcttcaa acaggtcttt catcgccgcg
    37381 cagatcgcgt cgctatcgac tgtaataatg tcgtcgagat attcctggca caggcggaag
    37441 gtttcgtcgc cgatgcgttt taccgccacg ccttcagcaa ataacccaac gcgcgggaga
    37501 tccactggat gaccggcttc caacgccgct ttcaggcagg cggaatcctc cgcttcgacg
    37561 gcaatcactt tgatttgcgg catcaattgt ttgatcagta ccgctacgcc cgccgccagg
    37621 ccgccgccgc caaccggcac aaagacacga tcgagatgcg aatcctgctg aagcagttcc
    37681 agcgccagcg tgccctgccc ggcgatcacc attgggtgat caaacggcgg cacccaggta
    37741 aaaccctgct gctgcgccag ctcaatagct ttcgctttcg cttcatcaaa attagcgccg
    37801 tgcaacagca cttcgccgcc aaaaccgcgt accgcatcga ctttaatatc cgccgttgct
    37861 tttggcatga cgatcagaga cttcacgcca agccgcgcgg aggagaacgc cacgccctgt
    37921 gcatggttcc ccgccgacgc ggtaatcacg ccgtgggctt tttgttcttc ggtcaatccg
    37981 gccatcatcg cgtaagcgcc gcgcagctta aagctatgta ccggctgccg gtcttcgcgt
    38041 ttgacgagaa taacgttgtc cagacgtgac gagagctttt ccattttttg cagcggcgtc
    38101 acctgcgccg cttcgtatac tggcgcgcgt agcaccgcgc gcagatactc cgccccttcc
    38161 ggcgcgactg acagaggttg agattccgcc atcatcaacc tcccagtttc gatttatcgc
    38221 gcaccgcgcc tttatcggcg ctggtcgcca ggctggcgta ggcacgcagg gcaaacgaaa
    38281 cctgacgctg acgatttttc ggcgtccagg ctttatcgcc gcgagcttcc tgcgcctcgc
    38341 ggcgtgcggc gatttcagcc tcgctcaact gcaactgaat gctgcggttc gggatatcaa
    38401 tcgcaatggt gtcgccatct tcaatcagcg caatagtgcc gccgctggcc gcttccggcg
    38461 agacgtggcc gatggaaaga cccgaagtac cgccggagaa acgcccatcg gtgatgagcg
    38521 cgcaggcttt gcccagcccc atcgacttca ggaaactggt cggatagagc atttcctgca
    38581 ttcccggccc gcctttcggc ccttcgtagc ggattacgac cacatcgcct tccactactt
    38641 tgccgccgag aatcgcctct accgcatcgt cctggctttc gtaaactttg acaggaccgg
    38701 taaatttaag gatgctgtca tccacgcccg cggtttttac gatgcagccg ttttcggcga
    38761 agttgccata cagcaccgcc agaccgccgt ctttgctata ggcatattcc agcgagcgga
    38821 tgcaacccgc tgcgcggtcg tcatccagcg aatcccagcg acaatcctga gagaacgcct
    38881 gggtagtacg gataccggca gggccagcac ggaacatttt tttaaccgct tcgtcctgcg
    38941 taaccgtgat gtcgtactgt tccagcgttt gcggcagcgt caggcctaat acgtttttca
    39001 cgttgcggtt cagcagcccg gcgcgatcca gctcgcctaa aatacccagc acaccgccgg
    39061 cacggtgaac atcttccata tggtatttct gggtacttgg cgccacttta cacagctgcg
    39121 gcaccttgcg ggacagcttg tcgatatcac tcatggtgaa gtcgatttcc gcttcctgcg
    39181 ccgccgccag tagatgcaga acggtattgg tcgaaccgcc catcgcaata tccagcgtca
    39241 tcgcattctc aaacgccgcc ttgttggcga tgttacgcgg cagtgcgctt tcgtcatcct
    39301 gctcgtaata gcgtttagtc agttcaacaa tccgcttacc agcattgagg aacaactgct
    39361 tccggtcagc atgggtcgcc agcagcgagc cgttgcccgg ctgcgacagg cccagcgctt
    39421 cgatcaggca attcatggag ttagcggtaa acatgccgga gcaggagccg caggttggac
    39481 aggcggagcg ttcaacctgg ttactttgat cgtcagagac tttcgggtcc gctccctgaa
    39541 tcatggcatc aaccagatcg agcttgatga tctgatcgga cagtttggtt ttcccggctt
    39601 ccatcgggcc gccggagaca aagatcaccg gaatattcag gcgcagcgag gccatgagca
    39661 tccctggggt gattttgtcg cagttggaga tacacaccat cgcgtcagcg cagtgagcgt
    39721 tcaccatgta ctccacggag tcggcgatca gctcgcgcga cggcagtgaa tagagcatac
    39781 ccccgtgccc catggcgatc ccgtcatcca cggcaatagt gttgaactct ttcgccacac
    39841 cgccggaagc ttcaatctgt tcggcgacca gcttaccgag atcgcgcaga tgaacgtgac
    39901 ccggcacaaa ctgagtgaat gagttcacca cggtgataat cggtttgcca aaatcactgt
    39961 cggtcattcc ggtggcgcgc cacagcgcgc gggcacccgc catattacga ccatgagtgg
    40021 tggtggcgga acggtactta ggcatgcttt atttactccc catcttttcc cttcatactt
    40081 cacgccacag gtgcgttggc tgcctcactc cagtcactta ctacagtaag ctcctgggga
    40141 ttcgctgcgt tgccgccttc ctgtgacgca aattattttg ggaaaatatt aattttattt
    40201 attatgaatt taccggatcc aaccagcccc atttatcctc ggtttctcca gtgaagagac
    40261 caaagaaggc ttgttggata cgcttggtaa cagggccgca acggccttcg cctacctgga
    40321 taccatcaac gctgcgtacc ggagtaattt ctgccgcagt tccggacata aacacttcgt
    40381 cggccagata cagcgattca cgggacagca cctgctcacg cacttcaata cccagctctt
    40441 tcgccagttt gatgatcgcg tcgcgagtaa tgcctggcag cgcggaagag gtaaacggcg
    40501 gagtaaacag cacgccatct tttacctcaa acaggttttc gcctgcgcct tcggatatat
    40561 agccgtttac atccagggcg atgccttcct gatagccgtg gcggcgcgct tcgctaccca
    40621 ccagcagtga ggaaagatag ttcccgcccg ctttggcggc ggtcggaatg gtgttcggcg
    40681 cagcgcggtt ccaggaagaa accatcgcat cgatcccctg atccagcgct tcggcgccca
    40741 ggtatgcccc ccacgggaac gcggcgatga tgacgtcagt ggtgtatccc gggggcgggt
    40801 taacgcccat accgacatcg cctacaaata ccaacggacg gatataggcg ctggtcagat
    40861 tatttttacg aattacgtcg cggcaggctt ccatcagctc atcaatgctc tgggaaaccg
    40921 gaaaacgata aatttttgct gagtcgcgca ggcgctgcat atgttcacga tgacgaaaca
    40981 ctaccgggcc tttgtgagag tcgtagcacc gaatcccttc aaataccgac gtaccgtagt
    41041 gcagcgcgtg agacattacg tgaaccttcg cgtcttccca gcgcaccatc tcgccattga
    41101 accaaatgta atcagctttt ttcgtcgtca tttttcttcc ttttgcgctc aggcgcggat
    41161 ttgttgtgat gtggcagcgc tctggcagat tgcgacatgc gcaacatcta ccagtttact
    41221 taactgacta aacagtaagt cgaccgaccg gggactggca acggtcaatt caatatttat
    41281 attctgcgca tcggtcgcgg cttccatatt catggagcac acctgaaaac cacgatggcg
    41341 caccacgcgt aaaacacgtt ctaaggtttc tggattaaag cgtgccgata cattgacctg
    41401 atgttgcatc atgataattt ctccagcatt tcagagttac tggcgccagg cggcaccaac
    41461 ggccagacat tttcaagttc gtcgattgag acgtgaagca ggtacggccc ttcgcttgcc
    41521 aacatcgtgt cgagtgccgc ttcaacctgg tctttacgag taatgtgctg gcctggaatg
    41581 ccgaaggcgc tggccagcat gaggaaatcg gggttatcgg tcagggtggt ttcgctatat
    41641 cgctcctgga aaaacagttg ctgccattgt cgaaccatcc ctaaccgctg gttgtcgagt
    41701 aagactatct tcaacggtaa ctgcttgcgt tttacggtgc ccaactcctg aacattcatc
    41761 atgaaggagc cgtcaccgga gatacagata acggtatcat tcggtcgcgc tacctgcgcg
    41821 ccaacggccg ccggtaagcc gaatcccatc gtccccagac cgctggaagt gatgaagttc
    41881 tccgggcggg tgtaagtcat atgctgggct gaccacatct gatgctgccc cacatccgtc
    41941 gtcaccacac tgtctgcggg tttgcgttcc gacaattgct tcaacaacaa cggcgcatag
    42001 atagtctcgc caggatggtc atagcgccag gcgtgttctg cgcgcagctc tgcacaagac
    42061 tgacgccatg cgtcgatctt cagcggttgc tgtaatgccg gcaacagcga atttaaatcg
    42121 ccctgcaacg cgacgtgtgc ctgacgcagt ttgttcattt ccgccgggtc gatatccata
    42181 tggattacgc tggcgttagg cgcaaacgta ttcagcttac cggtcacccg gtcatcaaaa
    42241 cgtgcaccca ctgcgatcag taaatcacac tcttgcaccg cgaaattagc cgctttagta
    42301 ccgtgcattc ccagcatgcc cagatagtac ggataatcag cttcaacagc ccccagacct
    42361 ttcagcgtgc aggtaactgg catttgcgtt accgcgataa atttacgcag cgccggaacc
    42421 gccttcgcca taccaacacc accgccgacg tacagcatgg gttttttcgc ctgttccagc
    42481 atctggcgcg cctgttccac atcagcctgc gggaaagtcg cttcgttatc gacggtagta
    42541 aaccagggtt ctagctcacc gctggccaac tggatatctt tcgggatatc caccagaact
    42601 ggtccgggac ggccagcgtt ggcgacttca aaagcctccg ccatgatgcg cggcaactct
    42661 gccagcgact gcaccaggaa gctgtgtttg gtacaggcca gcgacagccc taacacatcc
    42721 acctcctgga acgcatcggt gccgatgaac ggggcggaaa cctgacccgt gatcgcgaca
    42781 acggggaccg aatctaacaa cgcatccgcc aggccagtga tcaggttagt ggcgccaggg
    42841 cccgaggtgg cgatacaaac accggttttg ccggtagaac gggcataacc gattgccgcc
    42901 attgcggcac cctgctcgtg tcggcacaac aaatgctcca caccaccgtc atacaacgcg
    42961 tcgtaaaccg gcataattgc gccgccagga taaccaaata cggttttcac cccctgcgct
    43021 cgcaaagcat gtaccaccca ctgtgccccg ttcatagtta catccccgtc gtaaatcttg
    43081 agaaacagaa ttttatgctg ttattcacgc tctgctcctc gcttaagttt ttcaggccaa
    43141 aaaaaacccc cggacctttc ggtgcggggg tcttagttcg ttaaggcttg atttctaagc
    43201 ctttcctcgt ccaagtgcag ccccgcacgg tgggataata atcaccacca cgctaatcac
    43261 gaccaggcta atcactcgta gaagggctgt catttttgtc tattcttgca tcttgttcga
    43321 aggaatacct aaagagttac cataggtttt gccaatagca caagatattt ttttaaccac
    43381 gtttcagata atgcaggtga atgcctaaaa gggctttgtt ttttataaga aaaattagca
    43441 actgaaaaat tttcacgttt tcctccccct tttggtgcgc tttacaccct gttttccttc
    43501 ttttcgcttc tgcgagcgtt cttccagttt gatgtttctt acctgaaaat gacgccaaaa
    43561 ttcaggaatc agccgctaaa aaacaaaaag tcagtaattc gattttctct tctattccgc
    43621 ataatccacg taacaggagg gattatgtca ctggcgattg ttcatactcg cgccgcactt
    43681 ggcgtcaatg cgccgcctat cactatagag gtgcatatca gtaatggatt accgggatta
    43741 accatggttg gcctaccgga aaccacggta aaagaggtgc gtgaccgggt acgtagtgcg
    43801 attattaata gcggatatga atttccggct aaaaaaataa ccatttatgt aaacgggtta
    43861 atgaaaacaa caagttagat taaaaacaat aagttaggtt ggtggtcagt ggtggttatt
    43921 acggggtaat gccaaccgct gccgccactt tgtcgccact tggcagcgtt gccagaggat
    43981 tgaaacggag cgccgtttcc agatgatccg gtgccagatg tgcgtaacgc atagtcattt
    44041 ttatatcgtg gtgtccgaga attttttgta aggccagaat gtttccaccc gacatcatga
    44101 agtgcgccgc aaacgtatgg cgcagaacgt gtgtgagttg accgcgaggg agcacgatag
    44161 acgttttttc catcacggat aaaaattgaa aatagcagtc tgtgaagaaa ttgaacccat
    44221 caagcgccat gatctcttcg taaagctctt tactgatagg gatgcttctg tttttcttcc
    44281 ccttcgttct tacaaaggta attcggtatt tggtcacctg tgaacgagta agatttacgg
    44341 cttctcgcca gcgtgcgcct gtgcttaagc atatcttaac taccagtgct agaattgggt
    44401 cctgacgttt gcaatcagcc agtaattcaa caatctgctc atgggtaagc catgccatct
    44461 ctttttctgc gatggtgaat tttcgcatgt tctccagtgg gttcggatac gaccattcgc
    44521 ccagacggga tagttcgcta aaaacactac ttagatagct ttgctccagg ttaatggtga
    44581 ccgggcttgc tcctttcttc catttctcgc tgaagtagat ctcgcctgtc aggcgtttat
    44641 ctcgatagtg ggcaaacatt ttagaggtga gatcggttgc aagaggattg cccagagcgt
    44701 caaccatcag cagcaatttg tcatagacat gttgcccagc agtcagagat ttaccatgta
    44761 gtttgaacca tagctcaacc acgtctttca gggttcgacg atccactgat tcgcccagcc
    44821 atggctttga ttcggtttct tccatagtgt gacgctcaaa agccagagct tcgcctttgg
    44881 tggcgaattg tttacgcaca cgacgcccac ttcgtccggc ggggtaacat tcgcaaagcc
    44941 atttccctgt ggtgagtttt cgtactgcca taaaaaatgc cctccagtag agagcatttt
    45001 tactgtatgt ataaccagtg tcaatgtatg aaatcctacg accatacatc tcactgaagc
    45061 cataatgaag ttggctattc tttttgctat gtgagcatgt aacttttgcg gttaacctgc
    45121 ggctcatttt tattttagac gcagatataa aagcaaaagt tatcgtgagt ttttagtaca
    45181 gatttttttg gatttactaa tagttccatc attgcaaacg aatttgccat ctgaggtaca
    45241 gtgagaaaca cctccctttt tccctgagca gggataattt ctagcatagg tagttagtgg
    45301 gtttaataac aaagaacatg acaaaaccac aaaaaatacc ttaccaagca tagtttcctc
    45361 ccggtactat ttaacatact tgactgttaa acttataatt ttaccaatta tttcaatgtc
    45421 ttctatctta cattcgaagg ctctgtttcc accctcgacg aagattcttc caccgggtaa
    45481 acgagtaatg tcacggatcg ttacttcgcc atcaatactt attacccatt taccatcacg
    45541 tatatcatca aattctttat cacaaataaa ttcagaattg ttatctgtga tgacaaaagg
    45601 ttttttaaac gtagagggta gaaatccctt atcaaaaata taaaaaccgt cttcacgcaa
    45661 ggcaccatca gataatacat atttagcaac ttccatagta tttgtattac ctgaagtttg
    45721 ctttgaacca tgtccggttg tgagccaatt aagcgaggtg cccgtttcaa gggcgcactg
    45781 gattacccat tctgctggga atgagtcacg catgtagcgt gtggcgagtg tacttttaga
    45841 gattcctaaa tgatcgcaca acgcctgtcg agttttgaat ccataagctt ctaccatgcg
    45901 ctctatagcg cctcgtccgc ctttctccaa attcatggtc actccaagtg aacttttatc
    45961 ttgacgattt cattgcgcga tcgtatgttt atggtgttca caaaatacaa acgatccgta
    46021 ttcgtcctga ttaatcatca ttaaacgagg aatgttgcat catgagacct aacatttcaa
    46081 tcactcttac cacgcctcat gtgactattg agcgctatag cgagctgaca gggctgtcca
    46141 tcgataccat caatgacatg ttggctgacg gacgccttat ctgtcaccgt ttgcgcaaag
    46201 ataaaaaacg cgaaaaagtg atgatcaaca tagcagccat gaccgttgat gcgctttcag
    46261 aatgcaatct aaaccttaat tagttcgatt ctgaaataca tcagaggcat tgaccatgtt
    46321 tgattaccaa gtttccaaac atccacattt tgatgaagcc tgtcgtgcat ttgcactgcg
    46381 ccacaatctg gtgcaactgg cagaacgtgc aggcatgaat gtgcagattc tgcggaacaa
    46441 gctgaaccca gctcagcctc atctattaac cgcaccagaa atctggctgc ttaccgatct
    46501 gactgaagat tcaacgctgg tagatggttt tctggcacag attcattgtc tgccatgtgt
    46561 accgattaat gaggtggcaa aagagaaact gccacattac gtcatgagtg caaccgcaga
    46621 gatcgggcgt gttgctgcag gtgcggtatc tggcgatgta aaaaccagtg caggtcgtcg
    46681 tgatgctatc agcagcatta actctgtaac acgactgatg gcgttggctg ctgtttcatt
    46741 gcaggcccgt ttacaggcta accctgcgat ggcgagtgca gttgataccg tgaccggcct
    46801 cggtgcttca ttcggtttgc tgtgaggtgc ttatgctgac gaaagaacca tcatttgcat
    46861 cgctgctggt aaagcaaagc ccggcaatgc actacggtca cggctggatc atgggtgagg
    46921 atggaaaacg ctggcatcca tgtcattcac aagatgaatt gctgtctgaa ttgaccacga
    46981 ggaaacggag aaagtcaaaa tgtatgcagc ggaaagtgaa gtggtttatc agttttgtta
    47041 cagaggggag agttattcag tacctgaaga tgatttgctc tgttgttatc cgtcgttgtc
    47101 gggcgatggc agttactttt tcacgctaaa ggatgggacg tttttacggg gagagcaggt
    47161 taaagagacg gtacgaaaaa atgtatctcc ctttgagcgt taccgtaaga acaaagaacg
    47221 ataggtgcgt ttgggggata tgaagtatgg caattaatgg cgctgcggcg actgttccat
    47281 taagccccgg agaacgcctg aatggactta atcacattgc ggaattaagg gcgaaagtat
    47341 ttggcctgaa tattgagtca gagcttgagc ggtttattaa agatatgcgt gatccacggg
    47401 atatcaataa cgaacaaaat aaacgggcac tggctgccat attctttatg gcaaaaattc
    47461 cagctgaacg tcatagcatc agcattaatg agctgaccac tgacgaaaag cgggagttga
    47521 ttaaagcaat gaatcatttt cgtgcagtgg tgagcttatt tcccagacgg ctaaccatgc
    47581 cgaattaacc aactaatgaa attaatggcg taaacccgcc gggcatccct ttatctaaat
    47641 tcaggagaat tgattatgcg taatattgaa accctctcga ccaaaaccgg accggatgac
    47701 gcagggctta atattttact gacagaggct cgtctggaag aacgccgggc aagggctgaa
    47761 gcaatggtag ctcgccttga tagcctggcg tgtcatatca catcccgcca gctaacccac
    47821 gtcgaagcgg cagaactgct tcgtgtgact gctgaagcaa tccagaacga agcgcaggag
    47881 atccactaat ggctgatgca atggatctcg tacagcagcg cgttgaagaa gaacgccaac
    47941 gccatatccg tgctgcccgt gccaaaacgc cgggcgtgtc ccgcgtgctt tgcattgagt
    48001 gtgaagcgcc aattccgcca gcacgccgcc gtgccattcc gggtgtgcag ctttgcatta
    48061 cctgtcagga aatcgcagag ctgaaaggca aacattacaa cggaggtgct gtatgagcac
    48121 catcctgaaa tgggcgggaa ataaaactgc cataatgtcc gaactgaaaa aacatcttcc
    48181 tgctggcccg cgactggttg aacctttcgc gggttcctgt gctgtgatga tggagacgga
    48241 ttatcccagc tatctggttg cggatattaa tcctgattta atcaacctct ataaaaaggt
    48301 tgccgctgat tgtgaatcgt ttatatctcg cgccagagtt ttatttgaga tcgcaaacag
    48361 ggaggtggct tattacaaca taaggcagga gtttaattac tcaactgaaa ttactgattt
    48421 catgaaagcg gtatatttcc tgtatctcaa tcgtcatggt taccgtgggt tatgtcgtta
    48481 taacaagagc gggcatttca acattccata cggtaattat aaaaatccgt atttccctga
    48541 aaaagaaatt cgcgcatttg cagagaaagc ccagcaagca acgtttatct gcgccagctt
    48601 tgatgaaacg ctggcgatgc tgcaggtggg ggatgtggtg tattgcgatc cgccttatga
    48661 cggtacgttt tccggctatc acactaacgg cttcactgaa gatgaccagt atcacctggc
    48721 atctgttctt gaatatcgat catcagaagg tcatccagtc attgtttcta acagtgacac
    48781 atccctgatc cgttcgctgt atcgaaattt cactcaccac tacatcaagg caaaacgcag
    48841 catcggcgtg tcggctggcg agagtaaatc tgcaacagaa atcatcgctg tttctggggc
    48901 gcgctgctgg gtgggatttg atccttcgcg tggcgtggat agttctgccg tgtacggagt
    48961 gcgtgcatga gccatgctga tatgaacaac tgcagcggct ttaacgaggc cgccgcagca
    49021 ttctcatgga acagcccgaa aaaggctatt aacccttatc tggacctggc ggaagttgcg
    49081 ccggtttctg cgctttcaaa cctgatcact ctgtacgctg ccgataacga gcaggaacaa
    49141 ctgcgccgcg aggcactgag tgatcaggtt tgggagcgtt atttctttaa tgaatcccgt
    49201 gatcctgtcc agcgcgaaat ggagcaggat aagttcatta gccgggcaaa gttggcgcat
    49261 gagcagcagc gttttaaccc ggacatggtc attctggcag acgttaacgc ccagccttcc
    49321 catatcagca ggccgctgat gcaacgtatt gaatacttca gcagccttgg caggccaaag
    49381 gcttattccc gctatttacg tgagacgatt aagccatgtc tggaacggct ggagcatgta
    49441 cgcgacagtc agctatccac ttcttttcgc tttatggcaa gccatgaagg gctggacggc
    49501 ctgctgattc tgcctgaaat gagtcaggat caggtgaaac gcctgtccac ccttgttgct
    49561 gcgcatatga gcatgtgcct tgatgcagct tgtggcgatt tgtatgccac cgatgacgtt
    49621 aagccagaag aaatccgcaa gacatgggaa aaggtggcag cagaaaccct gcgactggat
    49681 gtcataccgc ctgcgtttga gcaactccgc cggaaaagaa accgccgtaa acccgtgccc
    49741 tatgaactca ttccgggttc gctggcgcgt atgttgtgcg ccgattggtg gtaccggaaa
    49801 ttatggaaga tgcgttgcga atggcgggaa gagcagttgc gtgctgtttg cctggtcagc
    49861 aaaaaagcat ctccctatgt cagctatgaa gccatgatgc ataaacgtga gcagcgccgt
    49921 aagtcgctgg agtttttccg ttctcatgaa ctggtgaacg aagacggcga cacgctggac
    49981 atggaggatg tggtaaacgc cagcagcagc aaccctgcgc atcgccgcaa tgagatgatg
    50041 gcctgtgtta aaggtctgga gcttatcgcg gaaatgcgcg gtgactgcgc cgttttctac
    50101 accatcacct gtccgtcacg tttccattcc acgctaaata acggcaggcc caacccgacc
    50161 tggacaaata cgacggtaag acaaagcagt gattatctgg tcggcatgtt tgctgcattt
    50221 cgtaaggcga tgcacaaagc cggattgcgc tggtatggcg tgcgggtggc tgagccgcat
    50281 catgacggta cagttcactg gcacctgttg tgttttatgc gcaaaaaaga tcgccgcacc
    50341 attactgctt tgttgcgtaa gtttgccatt cgtgaagacc gcgaggagct gggtaataac
    50401 acgggaccac gctttaagtc tgagctgata aacccgcgca aaggtacgcc aacaagctac
    50461 atcgcgaaat acatcagtaa gaacattgac gggcgtggtc tggctggcga gatcagcaag
    50521 gaaacgggta aatccctgcg tgataacgct gaatacgtta atgcctgggc gtctctgcat
    50581 cgtgttcagc aattccgctt ctttggcatt ccggggcgtc aggcttaccg tgaactgcga
    50641 ttgctggctg gtcaggcggc aaggcaacag ggggacaaaa aagcaggtgc gccggtactg
    50701 gataacccgc gccttgatgc aatcctggct gctgctgatg ctggttgttt tgccacctac
    50761 atcatgaagc agggcggcgt actggttccc cgcaaatatc acctcatcag aactgcttat
    50821 gaaatcaacg aagaaccgac cgcatatggc gatcacggta ttcgtattta tggcatctgg
    50881 tcacccattg cagagggcaa gatctgcact catgcggtga agtggaaaat ggttcgtaag
    50941 gccgttgacg ttcaggaggc ggcagccgac cagggcgctt gcgccccttg gactcgtggc
    51001 aataactgtc cccttgctga aaatttgaac caacatgaga aagataaatc agcagatggg
    51061 gataccagaa cggacattac ctgcatggat gacaaggaat tgcacgatta cctgcacagt
    51121 atgggcaaaa aagagcaccg ggaactggca gcaagattac gcctggttaa accgaaacgg
    51181 cgtaaagacc acaaacagcg aattacagag catcagcgtc agcagctcgt ctatgaactg
    51241 aagtccagag gatttgatgg cagcgagaaa gaagtcgatt tactgcttcg tggcggcagt
    51301 attccgtcag gagcaggcct gcgtatcttc tatcggaacc agcgtttgca ggaagatgat
    51361 aagtggcggg atctgtatta attacgcggg ttaacaattc gtgctcttaa taataccagg
    51421 catatcaggc tgatgaacgt aaaaaaacgt tttacatcag taagattatt atatactgta
    51481 aatataaaca gtggttatat gtacagtatt gcgtatggtg ttataggagg aaagatgcag
    51541 gactattttt tggagtcttt gaagctccag cgcattgatt tttttcttaa gcttgtagcg
    51601 gctagtgagt gtagcgatga agagaagggg ctggctctgc agtgggtttc tgaattgact
    51661 gatgagttga tggcgaaaat tcgaagccat gaatacagta ggtcgatgga tgtaatcagt
    51721 tgagcttgtt tcgttaggac ttgataaggg aaccgaaaag gggcattaag cccctttctc
    51781 ataagttgat ttagttgttc cccaaagagc cggccatggc tgcatattta atttcttcgc
    51841 tgggtatttc aggatgtagt tgaatttgcc tgatgacata gccaggaact tcgtcactcc
    51901 acagtttcgc cgcgtcctta cagaccttat acgcgaagtc tctattctca aaggcatagg
    51961 attttccgta tgcatattgc tgacaggtat gaacataagc tccgaagtcg ccgtctttat
    52021 ctggcaaagc acatccagcc aaggctatga tgattgctac taacgtaaag gagaaagtta
    52081 tacgtttcat ggtctctttc taagcgttta gcattattta actaaggggt atctgccgtg
    52141 atttggtagt ccctgatata tattctcagg gactatgctg aagtagattt aatttcgatt
    52201 atttagaaag gtacttatct ctaagttgat tcagtctgtc agcatcgcgt tctgaaaact
    52261 cggcgtcacc atagatcgat ttcccatctg cgtcttcaag gccaatgact gtgacggtaa
    52321 atatagcatc agccggaact ttaagttttc cccaatcaga gtatctatta ggggctaatt
    52381 tccagttggc tttctcacct ggttccagac ctccagaaat tttatagttg aagacgtcag
    52441 agaaccaagg gacgcttctt cctgggctgg caataacacc tttgaagaat actctggcaa
    52501 ccgctttgtc tgttccgttt tcaacgctaa tatccagaat tggctgatca ttgccgtaat
    52561 cctctttctg gaaataaaaa cgggaacgtt cgaccttgaa ggctttcatt ttttccgcag
    52621 cctgtgttgc agaggtttgt ttggcttcca gttcttttat ttcttgcaga gcctgttctt
    52681 tctctctctt ctcacgctca aggcgaatag tttgtgcgta atttataacc tcatcaccag
    52741 ttttaccttc caacgctgac ttaatttttg tttcgtagac gtccccagaa gacgttccag
    52801 cctgcattag ctctctcatg ttgatttggc taaaggcaac gactttaact gcatcatcaa
    52861 actgagcttt tttatctgca ggtaaggact ctcttacttt ttgaatggac tctttcatcg
    52921 actgatcgct tgatgcatcg atcttcggtt tgtcacaagc agtaagcagc agagcaaaag
    52981 caattacgcc agttaatttc ttcatatccc tatcccaatc gtaaaaaaac aaggctaatc
    53041 ctaacaggat tagctggcat gacaaactca tagccatata ggtgtgctgt ataaattagc
    53101 gggatgagaa agcctgcgca gaccctcatg ttgaaacttg attttagctc aaaagagctg
    53161 acactaaata actgcgcgga ataatgctcc acttcggtta gcccttgctg ggtaaggcgt
    53221 ggggccgttt tcttcgcctg atcctgctgt atctggccta cagtatgttg cccttacgcg
    53281 acatgccaca tgtcagtaaa cggcaggtgt agcagtatta gacgcagcta tttagtgtgt
    53341 attaagctgg ctcatattta tgactggttt caaagtttga ccgattttca tgtcatgcat
    53401 gtctatgctg catgagttcg catgatcgtt tgaggatcgg tttggctaag acatgccaga
    53461 actggcgggc ttttgctcat gtcatgcagg tgcatgaaaa ccactacata aagcgggcag
    53521 gcgtggcggg gatacgagcg cgcgctaagt catataagag ttatatattg atttgattgc
    53581 tggacatgca tacagtatcg ctctatcatc taataaatct tagagtattt gacaatgttt
    53641 ggataaaatg gaacctaact tattcataat ccgctaaaca gggatgtcag atgccatacc
    53701 aattggtaga gcttagcccc gtagctaacg atcttgaaca gttaggaacc aaagagaagt
    53761 tttggttcta tttctccgat gacactgtaa atttgcagtt gtttaagtac tctaggctag
    53821 gtactggcga gcattggtct gaaaagtgtg ctgctgagtt atgtcatttg cttaacattc
    53881 cacatgctag ctatgatttg gcgcgataca atggtcgatt cggtgtggtg actcagaata
    53941 tcattccatc tggtttccgg atggtaatgg gaaatgaagt gcttcacagt tcgacattcg
    54001 attatcctgg gcctttacaa gccggggaaa agccggtaag ggtcagagaa cacactgtca
    54061 caagggtatt gggttgttta gatagggaat ctatcaagcc tcctccgagt gtatatgatc
    54121 taaccgggct aaatgcagca gatgtatttt gtggattttt gatgctcgat gcacttgtga
    54181 gtaatcaaga tcgccatcat gaaaattggg cgatcatgct taacaatgaa actggtgagc
    54241 agtttttgtg tccaacatac gatcatgccg ctagtttagg aagggagatg ttagatgatg
    54301 agcgtaacga acggcttaat actaaagata aaaatcgaca aatcccatgt tttgtaagaa
    54361 aagctcgctc tgagctattc aaagcaaaaa ctgataaaaa gcccttgctg accgttgaag
    54421 catttcaaca tgcagttgaa gggagagttg ccgctcgcga ccattggtta ggtaagttga
    54481 gcgttttaac agaagattcc attacagatg tgtttaacca agtgccttca tcgtgtatat
    54541 ccgacagtgc acgtagattt gcaacgttaa tggtaatgga aaatcgcaga aggttactag
    54601 aatgactaat acaaactccg tttacgtcgc atggcaggca ccagatacca gagactggca
    54661 tgttgttggt aacttgcaag agcgcaaatc ggggtatgtt ttcaggtata ccaaaggtgc
    54721 tcttaaatct actaaattta caaagtttag cggcatgagt gatgttcgtg aaacttatgt
    54781 ttcggaagaa ttgtttcctc tttttaaaaa tcgcctttta tcaccgagac gtccagagta
    54841 tccgagtttc attaaatggc ttggatttga agaagataag gtaaatccta tcgatattct
    54901 tgctcgctcg ggaggcttac gaagcactga tcagctgcag attttcaaaa aaattgatgt
    54961 tgattctgat ggtaactttg agcatttttt cttcttacat ggacttggtt acttaaatag
    55021 cttagctaat gctcgtgtat ctgaattgaa accggggcaa attttgcgtc tttgcttgga
    55081 tcttcaaaat gaatacgatg gggatgctgt tgtcgttcgt gcagataaac cagctgaaat
    55141 cgttggttac tgccctaggt atttaagtaa tgatatcaag aagatgttat tggatgatcc
    55201 aaaatcaatc actttaacgg tcgaaaagat tagcgatgat gctcctcata actatcggtt
    55261 attatgtaaa ttatcaggag tactaagcca agcctgtcaa tcgacgctga ttcctcagga
    55321 tgagtttgaa cctattgagt aaatgaagaa aagccaccaa acggtggctt ttcttattat
    55381 gggactatat ctagcgagta ggtattaaac tgtatcgcct ccttgccaag ccaatcattc
    55441 atctcctgta atcgcttttg tagtggcatt agctcatttc ggacgaatac acggcttgcc
    55501 ttctccacat ccccaaaccc cccaacatta ttcggcataa tccccatcat ttgcggtggc
    55561 acacgatgcg ccgccatcat gtcgtcccgg cttacgttct tgatgttcag aaactcatcc
    55621 tttgccgcca cttctgacag cgggatgatc tgaagcccgt cctttttgcc gttaggcgag
    55681 tacataaaca ggttgcggaa gttgcccgga cctttggcgc ttttcatcgc gttgcggagg
    55741 ttgttcacat cctcctggtt ctgagcggca tcggtcatgt acattatgaa tcctgcatgg
    55801 ctgccattaa tataatattt gcgtcggaac agcgtggcgg actcgttgag cagggctgac
    55861 ggaatggcag aaagatagcc gggcaggccg tagatctcct ggttgatatc gggttccatc
    55921 agatgaaaga tgctgccttt cgtgaactga tacggctggg ttgtcatacc gtattgcaca
    55981 aaccagtagg tatccaggtc taacccgcgt cgggtgtatt ttgccagagc aggctcaagg
    56041 gcgataattt caccgaaccg gttcgtgcgt ttctccaggt aggcgttacc aaataccaga
    56101 tagtcctgca caaaacgtga aaaagcctgc tggctgagca gcgggtgagg gatgtaggtg
    56161 ctggtcagaa tgttgcattt caccgcaatc ggtgagctat gatgcacggc ggcgcggaag
    56221 gttcgcgcca gtccgtcgaa actcactggt ggctcatacc agcggtccat ctgtacgcat
    56281 tccacatagt ccagtaattc gcggcggtcc agaacaggaa cgggatcgcc gaagctgaat
    56341 gcttcggctg aagtctggct tttatgctgg atctgattca tcgccgctgc gcggtttttc
    56401 ttacgctttc ccatcaaaaa atctccacaa tattactggt attggcggac tcgccttgca
    56461 gtggttcgtt aaacagtgcg tgcattgttg cccaggccag atcggcgtgg ctggcttctt
    56521 cgctgcggct ggcttcatag gtcgggcggt tgccactggc ggtggtggcg cgacggattg
    56581 ccataaatga ctgcgctatg tcggtgtgtc cggcgtcaaa ctccagacgg cggtggctga
    56641 taatgtcgta ggccttgagt accagagcgt ttttaacgtt ggggttgtag acaaactccc
    56701 ggacggcagg aaagaacgct ttcacgttct cataaacccc gtgaccgacg cctgtcgagt
    56761 caatgccgat ataggtcacg ttgtactgct cggtcagttt tttgattgca tcagcctggg
    56821 cgcggaagtc catcccgcgc cactggtgac gctcaagaat gcgaaactta ccgcctggca
    56881 cggctggcgg tgccaccacc acgcatccgg cgctgtcgcc gttctgcgta ccttttgccg
    56941 ggtcataacc gatccacacc tcgcgccagc caaacgggcg cagggccagt gcatgaaagt
    57001 cggtccagac ttcccaactg tccaccatgc acgcctgcag ttcgctgagc gggaacacgg
    57061 acgcgagatc gtccacgaac tcgcacatca gcaggttctg gtattcgtcc gggctgtact
    57121 ccatgcgtag ctggtcgagg tcgaacaggt tacagccgcc gcgcaccgca tcttccacgg
    57181 tgactatctg gcggtattgc ccgtctgcgc acagcaagcc gggggccaga ttgttgtggg
    57241 acaggtcgat gtccacctta tcggctttgt tgcgcccacg gttaaacagc gcaccggacc
    57301 agaacggata agcactgtgt gtaaggctgg atggcgtgga aaaataggtt tgtcgccatt
    57361 ttttgtgaat agccataccg gaagccactt tgcgcagctc ctggaatttc ggtatccaga
    57421 aatattcatc cagatacagg ttgccgtggt aactctgggc cgtgcgggca ttggtgccga
    57481 ggaagtaaag cgtggccccg ttgggaagca ccatcggatc gcctttcagc tccacctcca
    57541 cttctttggc gaagtcgatg atgtactgtt taaagacgtg ggcctgtgcc ttactggcgg
    57601 aaaggaaaat ctggttacgt ccggtaagca gggcgtcaat cagggcttca cgggcaaagt
    57661 aaaaggtcgc gccgatctgg cgtgacttca gcaggttgcg gatgcggttg gtttttccgg
    57721 cttcccacca gtggcgctgg tagttgaaca tggaggaatg gaaaatttct tccagcttct
    57781 caatctgttc atcggtgaaa acgttctttt ccggctgacg gcgtgggcct ttgttgcggt
    57841 tggcgacgtt agggtttaag tcggcttcgt tgccgccatt gttaaacttg ccgatccgcg
    57901 cgtggcgttc cgactggcgc gccagcaggt caatctcttt gaaatctttc ccttctttgt
    57961 gctccttcat aatgagctgg cagtagcgtg cggcggtggt gagctgcatc tgatccagcg
    58021 gcccatagtc accccacttg tcgcgttttt tccagctgtg aacggttgca actttctcgc
    58081 ccagcatttc agcaatgcgg gctacgcggt atccctgaaa gtacagcagc atggcctgcc
    58141 gacggggatc gagatctgcg ggtgtcagtg tggtgttcat ggcacaaacc tacagccttg
    58201 aatgaaggct ttccccgcct gcggtttgtg tggttgtcgg tacaaatacc gcgcattgtt
    58261 tcactgcccc catcaccgca accataaggc tccagtaagt tttttctaac ggagcacggc
    58321 tcatgacagt gaaagcaaag cgttttcgca tcggggtgga aggtgccact accgacggac
    58381 gcgaaatcca gcgtgaatgg ctggaacaga tggcagccag ctacaatccg gcggtgtata
    58441 ccgcgctgat taaccttgag cacatcaagt cttatctgcc ggacagcacc tttaaccgct
    58501 acggcaaggt gacggcgctg tttgctgaag aaatcacgga aggtccgctg gcgggcaaga
    58561 tggcactgta tgccgacgtt gagccaacgg agtccctggt ggagctggtg aaaaaaggcc
    58621 agaaattatt cacctctatg gaagtcagcc cgaagttcgc tgatacgggc aaagcctacc
    58681 tggtcggcct ggctgccact gatgaccctg ccagtctggg cactgaaatg ctgacattca
    58741 gcgccagtgc agcccataac ccgctggcaa accgcaagca gaatcccgcc aatctcttta
    58801 ccgccgcaga ggaaacggtg atcgaactgg aagaaatcca ggaggacaag ctgtccctgt
    58861 ttgcccgcgt cacggcactg ttcaccaaaa aagagcagtc cgacgatgcc cggttctctg
    58921 atgtgcataa ggccgtggag ttggtcgcca ctgagcagca aaacctgagc gcacgcaccg
    58981 aaaaatccct gtctgagcag gaagaacgtc tgtctgagct ggagactgcc ctgcaggcac
    59041 agcagacagc ctttaacgaa ctggtgaata agctgagtca tgaagacagc cgccaggact
    59101 accgccagcg tgcaacaggc ggtaacgccc ccgctgacac tctgaccaat tgctgatgga
    59161 gcacaaaacc cgatgaagaa gaatacccgc tttgctttta acgcttacct gcagcagctg
    59221 gcgcgtctga acggtgttgc agttgaagaa ctgtccagca agttcaccgt cgaaccgtcc
    59281 gtgcagcaga cgctggaaga ccagatccag cagtccgccg ctttcctgac actgattaac
    59341 gtcacgccag tgactgagca gtccggtcag ttgctggggc tgggtgttgg cagcaccatt
    59401 gccggaacca ctgataccac cgcgaaagag cgtgaacctg tcgatccgac gctgatggtc
    59461 gatgtggaat ataaatgcga gcagactaac tttgacacgg tgctgaccta cgcgaagctg
    59521 gacctgtggg cgaagtttca ggatttccag gtgcgtatcc gtgacgccat cgtgaaacgt
    59581 caggcactgg accgcatcat gatcggcttt aacggcgtga agcgtgcgaa aacctccaac
    59641 cgtagcgaaa acccgctgct gcaggatgtg aataaaggct ggctgcagaa aatccgtgag
    59701 gatgcaccgg atcacgtcat gggcagcacc accacgggcg gtgaaactac accgggtgcg
    59761 gtgaaagtcg ggaaaggtgg cgaatatgcc aacctagacg ccgtagtgat ggatgccgtc
    59821 aatgagctta tcgacgtggt ttaccaggac gatgacgatc tggtggttat ttgcgggcgt
    59881 gaactgctgt ctgacaagta tttcccgctg gtcaacaaag agcaggaaaa cagtgaaaaa
    59941 ctggctgccg atatgatcat cagtcagaaa cgcatgggtg gcctgcaggc cgtgcgtgcg
    60001 ccgttcttcc cgccgaatgc gctgctaatc acccgtctgg ataacctgtc catctactgg
    60061 caggaaggca cccgccgccg ttcagttatc gacaacccga aacgtgaccg gattgaaaac
    60121 tttgaatccg ttaacgaagc ctatgtggtt gaggactacc gctgcgccgc actggtggaa
    60181 aacatccaga ttggcgattt cagcgccgct gcagcagaag ccggagcgta acctatgagc
    60241 ctgagtcc
//
LOCUS       DAGWFR010000010        56983 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.010, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000010 DAGWFR010000000
VERSION     DAGWFR010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 56983)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 56983)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..56983
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.010"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..169)
                     /locus_tag="MOX77_000717"
     CDS             complement(<1..169)
                     /locus_tag="MOX77_000717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
                     /protein_id="HCA3356350.1"
                     /translation="MPEFFSFINEILWGSVMIYLLLGAGCWFTWRTGFIQFRYIRQFS
                     RSLKGSLSPQPG"
     gene            438..1391
                     /gene="tal"
                     /locus_tag="MOX77_000718"
     CDS             438..1391
                     /gene="tal"
                     /locus_tag="MOX77_000718"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HCA3356351.1"
                     /translation="MTDKLTSLRQFTTVVADTGDIAAMKLYQPQDATTNPSLILNAAQ
                     IPEYRKLIDDAVAWAKQQSSDRAQQVVDATDKLAVNIGLEILKLVPGRISTEVDARLS
                     YDTEASIAKAKRIIKLYNDAGISNDRILIKLASTWQGIRAAEQLEKEGINCNLTLLFS
                     FAQARACAEAGVYLISPFVGRILDWYKANTDKKDYAPAEDPGVVSVTEIYEYYKQHGY
                     ETVVMGASFRNVGEILELAGCDRLTIAPALLKELAESEGAIERKLSFSGEVKARPERI
                     TEAEFLWQHHQDPMAVDKLADGIRKFAVDQEKLEKMIGDLL"
     gene            1502..2092
                     /gene="mog"
                     /locus_tag="MOX77_000719"
     CDS             1502..2092
                     /gene="mog"
                     /locus_tag="MOX77_000719"
                     /EC_number="2.7.7.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000380375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin adenylyltransferase"
                     /protein_id="HCA3356352.1"
                     /translation="MNTLRIGLVSISDRASSGVYQDKGIPALEEWLASALTTPFELQT
                     RLIPDEQAIIEQTLCELVDEMSCHLVLTTGGTGPARRDVTPDATLAIADREMPGFGEQ
                     MRQISLRFVPTAILSRQVGVIRKQALILNLPGQPKSIKETLEGVKADDGSVSVPGIFA
                     SVPYCIQLLDGPYVETAPEVVAAFRPKSARRENMSS"
     gene            complement(2149..2715)
                     /gene="satP"
                     /locus_tag="MOX77_000720"
     CDS             complement(2149..2715)
                     /gene="satP"
                     /locus_tag="MOX77_000720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate uptake transporter"
                     /protein_id="HCA3356353.1"
                     /translation="MGNTKLANPAPLGLMGFGMTTILLNLHNAGFFALDGIILAMGIF
                     YGGIAQIFAGLLEYKKGNTFGLTAFTSYGSFWLTLVAILLMPKMGLTDAPDAQLLGAY
                     LGLWGVFTLFMFFGTLKAARALQFVFLSLTVLFALLAVGNITGNEATIHIAGWVGLVC
                     GASAIYLAMGEVLNEQFGRTILPIGEAH"
     gene            complement(2865..3578)
                     /gene="msyB"
                     /locus_tag="MOX77_000721"
     CDS             complement(2865..3578)
                     /gene="msyB"
                     /locus_tag="MOX77_000721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acidic protein MsyB"
                     /protein_id="HCA3356354.1"
                     /translation="MNVTYLHDEDLDFLQHCSEEQLADFARLLTHNEKGKARLSSVLS
                     HNELFKAMEGHPEQHRRNWQLIAGEFQHYGGDSIANKLRGHGKQYRAILLDVAKRLKL
                     KADKSMSTFEIEQQLLEHFLRHTWQKMDAAHKQEFLQAVDAKVSELEELLPLLMKDRS
                     LAKGVSHLLSTQLTRILRTHAAMSILGHGLLRGAGLGGPVGAALNGVKAMSGSAYRVT
                     IPAVLQIACLRRMMAAVQA"
     gene            complement(3614..4018)
                     /locus_tag="MOX77_000722"
     CDS             complement(3614..4018)
                     /locus_tag="MOX77_000722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2541 family protein"
                     /protein_id="HCA3356355.1"
                     /translation="MRSVLTISVGLLFGLALSSVAHANDHKILGVIAMPRNETNDLAL
                     KIPVCRIVKRIQLTADHGDIELSGASVYFKTARSASQSLNVPSSIKEGQTTGWININS
                     DNDNKRCVSKITFSGHTVNSSDMARLKVIGDD"
     gene            4367..6283
                     /gene="dnaK"
                     /locus_tag="MOX77_000723"
     CDS             4367..6283
                     /gene="dnaK"
                     /locus_tag="MOX77_000723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001737966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HCA3356356.1"
                     /translation="MGKIIGIDLGTTNSCVAIMDGTQARVLENAEGDRTTPSIIAYTQ
                     DGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPYKIIGADNGDAW
                     LDVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRI
                     AGLEVKRIINEPTAAALAYGLDKEVGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEV
                     LATNGDTHLGGEDFDTRLINYLVDEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSA
                     QQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDI
                     NDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLL
                     DVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRASD
                     NKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLN
                     EEEIQKMVRDAEANAESDRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIE
                     SALSALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQQHAQQQAGSADASANNAKDD
                     DVVDAEFEEVKDKK"
     gene            6369..7508
                     /gene="dnaJ"
                     /locus_tag="MOX77_000724"
     CDS             6369..7508
                     /gene="dnaJ"
                     /locus_tag="MOX77_000724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HCA3356357.1"
                     /translation="MAKRDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAE
                     AKFKEIKEAYEVLTDAQKRAAYDQYGHAAFEQGGMGGGFGGGFNGGADFSDIFGDVFG
                     DIFGGGRGRQRAARGADLRYNMDLTLEEAVRGVTKEIRIPTLEECDVCHGSGAKAGTQ
                     PQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIKDPCHKCHGHGRVEKSKTLSVK
                     IPAGVDTGDRIRLAGEGEAGEHGAPAGDLYVQVQVKQHPIFEREGNNLYCEVPINFAM
                     AALGGEIEVPTLDGRVMLKVPSETQTGKLFRMRGKGVKSVRGGAQGDLLCRVVVETPV
                     GLSEKQKQLLKDLQESFGGPTGEKNSPRSKSFFDGVKKFFDDLTR"
     gene            7793..8740
                     /locus_tag="MOX77_000725"
     CDS             7793..8740
                     /locus_tag="MOX77_000725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCA3356358.1"
                     /translation="MGSKGANKSFDYNLIKILDAVILSGNAAMAAKKLGITPAAVSLA
                     LKRLQSYYPEELFSRGKGGLIPTAKAVDIHQNFSQVMKLVDDTFLCNSKKDEAFQITL
                     LGSDIVESYYLSQLYNSDIFDRILINHFSVRNMSREHISELLFTAQGDLLISAEPLLE
                     SGIENQIIDSFKSFVCICSSKHMLSTLSQLSLHHFYSSRHALYQPGMGASVIYHDSEL
                     FKDELYYTGRRIVGYRSDSLNGLMSMIERTSLIALMPLKLALFYKNHRKYDIKFIQPP
                     PELAFKSVQVYASWKKNSRNISTINEMVSMLQTLSSFRR"
     gene            8867..9211
                     /locus_tag="MOX77_000726"
     CDS             8867..9211
                     /locus_tag="MOX77_000726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HCA3356359.1"
                     /translation="MSIPNHVSTTEVVLLELEILLTIISIGAWGGFVSYLLRKDKTEY
                     NSSHESIKYCLTQIVISCFTSFLLSAIAIEKECSFNIVLLAAGLGGVFASPILKILGR
                     RIKKIIGGNNSD"
     gene            complement(9272..9805)
                     /locus_tag="MOX77_000727"
     CDS             complement(9272..9805)
                     /locus_tag="MOX77_000727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 108 protein"
                     /protein_id="HCA3356360.1"
                     /translation="MNPIIDGIIALEGGYVFNPKDKGGATHWGITEATARAHGYAGDM
                     RDLTHAEAYAILEEDYWIKPGFDVISTLSWPVSFELCDAAVNIGDYHPSAWLQRWLNV
                     FNHEGKRYPDVHVDGNIGPRTLAALEHYLAWRGQEGEAVLVKALNCSQGMYYLNVAEK
                     NHNNEQFIYGWIKNRVT"
     gene            complement(9822..10265)
                     /locus_tag="MOX77_000728"
     CDS             complement(9822..10265)
                     /locus_tag="MOX77_000728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HCA3356361.1"
                     /translation="MKTYIINSNCIYNEGKYELRTVSNSQVIKMTAMRAKCLSFIIEN
                     AHLEIIERQKITTALWGSRSHYVNDANLTQILYLIRRDLKALGINDLFITIPRQGLKV
                     NSDIAIIATDSETKGRKKQIVRQTIAALTTVFSVTLGSLMYLHIH"
     gene            10646..12745
                     /locus_tag="MOX77_000729"
     CDS             10646..12745
                     /locus_tag="MOX77_000729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chitinase"
                     /protein_id="HCA3356362.1"
                     /translation="MATSKLIQGDTITETTHAANGFDPATSDDKISYTSARVAKPVYN
                     KYKNSTTKPKVFGYYTDWSQYDSRLQGNMSQPGRGCDLTNVSPTAYDKLIFGFVGITG
                     FRKIDKEDRDVVAEAAALCGKVKYEPTFLDPWGDFQSYINLGFETSGWDVDPKTVTQA
                     NAKGMLGALRDMQAKAKAAGHTLALSMSIGGWSMSNGFHETAASDSSRKTFAKGVVKL
                     FKQFPMFSEVDIDWEYPNDEGAGNPFGAEDGANYALLIAELRKQLDSAGLSNVKISIA
                     ASAVTTIFDHAKVKDLLAAGLYGINLMTYDFFGTPWAETLGHHTNRKALEEGGWAVET
                     IVDHLLAEGFSADRINIGYAGYTRNARQVEIESLSPLKGSYNPGSGDTTGSFESGTSE
                     WYDVIYSYLDLENQKGRNGFNVYTDQVADADYLYSPESKLFLSLDTPRTVKAKGEYAA
                     KLGLGGVFTWTIDQDNGVLVNAVREGLGYEIESEVIDMEPFYFEGINVEKDDEQSDSD
                     DAQKVNHAPKAAIELMVVGGSTVQLSGAGSSDEDNDELSFSWGVPSQIDVADKTAEII
                     EVVVPEVSEKTAFQFTLFVRDCYNEPSSQQRFVLTAVPALSQVQPEPEEEEEIIVPVP
                     DEEEETTPAEDDTSADDKTSPYAQWDASTVYGANWGSFEIVSWKGHNYQVKWWSMGNQ
                     PDLNCGVGGAWTDLGAY"
     gene            12837..15833
                     /locus_tag="MOX77_000730"
                     /pseudo
     CDS             12837..15833
                     /locus_tag="MOX77_000730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459024.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="chitinase"
     gene            16114..16818
                     /locus_tag="MOX77_000731"
     CDS             16114..16818
                     /locus_tag="MOX77_000731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HCA3356363.1"
                     /translation="MKKMMNDAFAKDNNENLLHSFLFSQQAKPHAAIDALFSALLPFG
                     QPFTLGIGDEFYLQANDEHYIVLLESGIVSFCRDDNRLHISSSFAPSVVGMVDSYGAT
                     YNVPARPEHFLLAETVCSGRFVRLPDFIKIADECDLWHDVARCLAYRLMVMSARDREL
                     VGVDSYLKVRALLIEIWAYPQAYRENIIVLNFIQRRTGISRSRTMKILSELKKGGYIH
                     IDNGRLTALGKLPVAY"
     gene            17246..17788
                     /locus_tag="MOX77_000732"
     CDS             17246..17788
                     /locus_tag="MOX77_000732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein BcfA"
                     /protein_id="HCA3356364.1"
                     /translation="MKKPVLALMVSAIAFGGMLSTAQADTTTVTGGTVNFVGQVVDAA
                     CSVSADSVDQTVTLGQVRASKLTEAGMAANQKEDFTIKLEDCDTQTSQNAAVIFNGQQ
                     DANQPGSLANTAGAGSATNVALQLYGPDGQALNIGESSSTVTLNDGENVIPLSVDYIA
                     TGTATAGNVTATATFSMVYS"
     gene            17889..18575
                     /gene="bcfB"
                     /locus_tag="MOX77_000733"
     CDS             17889..18575
                     /gene="bcfB"
                     /locus_tag="MOX77_000733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial biogenesis chaperone BcfB"
                     /protein_id="HCA3356365.1"
                     /translation="MKKNVPIFLRLLLLLSAAGLSFAVQAGGIALGATRVIYPQGSKQ
                     TSLPIINSSASNVFLIQSWVANADGSRSTDFIITPPLFVIQPKKENILRIMYVGPSLP
                     TDRESVFYLNSKVIPSVDKNKLTGNSLQIATQSVIKLFIRPKNLAEAPAHAPATLRCR
                     NERGQLTITNPSPYYVSMVELYSAGKKLPNTMVPPKGAITLPATPGQVSLRTVNDFGA
                     TTPARVCPAS"
     gene            18580..21201
                     /gene="bcfC"
                     /locus_tag="MOX77_000734"
                     /pseudo
     CDS             18580..21201
                     /gene="bcfC"
                     /locus_tag="MOX77_000734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459028.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial usher BcfC"
     gene            21202..22209
                     /locus_tag="MOX77_000735"
     CDS             21202..22209
                     /locus_tag="MOX77_000735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein BcfD"
                     /protein_id="HCA3356366.1"
                     /translation="MKIPLLFALLAGSVVSQYAHADVCKNVNGVPSSINYDLTTTLTA
                     EQNQVGKTVQLEKSQEVNVQAVCPAGASTYSQTYRSYVSPYPVVETSGNWKYLKLDPD
                     YLEGGMRIEDSSAGDIYPPMNNVLMGYDENVKAGQPFYVRDSNLEFQLKIVKPFVGTV
                     NISPKTMFNVYVMTAAGDPLTDVVYSILYSGTVTVPQSCEINAGQTILVNFGALYSGN
                     FNHAGQKPEGVRAKKFSVPVKCSGLDSQVNLTMRLIATPDSHFPQAIASDNADVGVVV
                     ETDEGNALIPNDVQSVAPFITDSAGRANITLQAYPVSTTGETPAEGAFTALASLRVDF
                     D"
     gene            22210..22755
                     /locus_tag="MOX77_000736"
     CDS             22210..22755
                     /locus_tag="MOX77_000736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein BcfE"
                     /protein_id="HCA3356367.1"
                     /translation="MNRSHCALFVMGLILCPQINASADDLAYNLEFTGTIVAQTCDID
                     ISSLSQSIDLGQFAVGDFPSTGTTTKFKPFNINLKNCSRGITGAKIWFTGEPDPDNPA
                     LLAITDTGMGSGNMLASGVGVEILNDDQDTISINNADSVVYPLKAGRNTLSFYIRYKS
                     TRPTVTSGNATAVMYFDMQYE"
     gene            22771..23289
                     /locus_tag="MOX77_000737"
     CDS             22771..23289
                     /locus_tag="MOX77_000737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein BcfF"
                     /protein_id="HCA3356368.1"
                     /translation="MRNDILYGIGMLLAASGVQAHDGRVYVSGTITDNTCSLSPGSEN
                     INVAMGAVSQRQFYRAGDGSAWQPFAIDLQNCGSTASGVTVSFSGAGDSRNTDLLALT
                     AGESDASGIGIALYDQNKTLIPLGQESDVVTLSPGQASAHLQFYARYLADGGTVTPGD
                     ANASATFILAYE"
     gene            23255..23986
                     /gene="bcfG"
                     /locus_tag="MOX77_000738"
     CDS             23255..23986
                     /gene="bcfG"
                     /locus_tag="MOX77_000738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial chaperone BcfG"
                     /protein_id="HCA3356369.1"
                     /translation="MPPQPSFLPMNKFFLHCAIYWCLLPISWAQAGVVIGGTRFIYHA
                     GAPALSVPVSNHSEASWLIDTHILPGGRWPGTKNEGNITPFVVTPPLFMLSARQENSM
                     RVVYTGGPLPADRESLFTLSIAAIPSGKPEANRVQMAFRSALKLLYRPEGLAGNPQQA
                     YRHLIWSLTPDGATVRNPTPYYVTLFLLRANERAQDNAGVVAPFATRQTDWCRHAVRC
                     TVRWQSINDYGRVMTAQTVDLTRIH"
     gene            24051..24896
                     /locus_tag="MOX77_000739"
     CDS             24051..24896
                     /locus_tag="MOX77_000739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HCA3356370.1"
                     /translation="MYYHALKLSRLAMLTLAGVAVSASAIAADSAPTSQIGPTAEAYI
                     VSHPDKVGEVVATYLAEHPEFLVAASETLHQRQQIAQQQAYVQLALQYRAELLSSSSP
                     SVGPSEAKAAVVMFFDYQCSWCSKMAPVVENLIKANPDTRFIFKEFPIFSSRWPVSGL
                     AARVGEQVWLTQGGAKYLDWHNALYATGKVEGALTEHDVYTLAQHYLTPTQLAAVKEA
                     QSSGAVHDALLTNQALAQHMDFSGTPAFVVMPQTQNGDVKRVTVIPGSTTQDMLQMAI
                     QKAKG"
     gene            24935..25222
                     /locus_tag="MOX77_000740"
     CDS             24935..25222
                     /locus_tag="MOX77_000740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000839835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356371.1"
                     /translation="MKSMRCVIPVILLSFIVHEGTAKPTAQIHFMGSVVEAGCWNDVG
                     TLEIQCYNKEGVERYIIVENIITPISSPHATVKRDYLDEDKQLTVLRIVYD"
     gene            complement(25322..25771)
                     /locus_tag="MOX77_000741"
     CDS             complement(25322..25771)
                     /locus_tag="MOX77_000741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HCA3356372.1"
                     /translation="MRQYTINNEFIYNESLREIISLHDKKVLKVTLMRARCLSYLFEN
                     AYKKLITREMISHAVWGERSQFVSDANLTQLLYLLRRDLQQIGLFELFVTLPRQGIKI
                     DERFIIDAADIPPQAIQYHTHRCNKIISIGIPTLFLLIVLFFLAPFI"
     gene            26141..27136
                     /locus_tag="MOX77_000742"
     CDS             26141..27136
                     /locus_tag="MOX77_000742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCA3356373.1"
                     /translation="MRPIKNAKKIDYNLIKVFDTVITEGNATRAARKLDVTPAAISQA
                     LLRLQNLYGEELFIRTRKGLVPSSKGKSLHQVFRQAIESIESTLCDKTDAQESNELIV
                     LGSDITENYYFPALLDTVLMNRYIIKHYAIKKTGEYSPASMLTHGYADIIMGILEIKN
                     EMIESFLIDNLSDFVCVCGEKSPLVGLEKMSLYNFYAARHAVYHSDMFSSFNADSIDL
                     FKSSTPYAGRREIGYYSDSLFGVIGVVEKSDMVAILPGKIATYFRDVRRYNIKILRMP
                     DEIIFRTLPVYAYLATNSTHYKNAKKLISTFQSTFLFSQEKQPDALVEGSTSLCD"
     gene            complement(27153..27589)
                     /locus_tag="MOX77_000743"
                     /pseudo
     CDS             complement(27153..27589)
                     /locus_tag="MOX77_000743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459036.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
     gene            28112..29830
                     /locus_tag="MOX77_000744"
     CDS             28112..29830
                     /locus_tag="MOX77_000744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aryl-sulfate sulfotransferase"
                     /protein_id="HCA3356374.1"
                     /translation="MNKKNSSMVNLPAPRESINQKIDTNNALVLNHNAIYEQRLAEIT
                     QSNTCDKAIVTVNPYGTAPLSLYLGIWIDEAAALEINVVDSEATTEAVRYQYDVHPGA
                     NLIPVCGMVSAVNNQITLRLASQIVGQYTVMTDALPPTDSANVSLGFPIISVSCPAQQ
                     ASLMEEGLYFSTYFDRYNLAFDHNGIVRWYVSQEIPSYNFVRMDNGHFLATSQGINHC
                     LNMYEFDIMGRVYTVYLLDNEFHHSILPIENNLAIAPSEYSNGRPDGYSTGKDGVSII
                     NLSTGLEVAYYDMLYVMDYSRSPRPSGSAPGQDVSMDDWLHINQSYINEPNNLLICSG
                     RHQSAIFGVNVDSGELRFIMANHEDWSDEFKQYLLTPVDDDGVPLYDLTSPGGIDAAD
                     KNFWTWGQHNIVEIPNDEPGILEFMVFDNGNYRSREDAKSLLPLDNFSRVVQFKINLN
                     TMTVTRPYEYGKTEVGNRGYSSFVSAKHLLTNGHLVIHFGATTVDEFEHTITAQPGSS
                     DLVDPDEGQQALGRLVLQEINKETKEVLFEAMVTSGYFKNEETNGTNYRYDISAFRVY
                     KMPLFA"
     gene            complement(29876..31447)
                     /locus_tag="MOX77_000745"
     CDS             complement(29876..31447)
                     /locus_tag="MOX77_000745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional metallophosphatase/5'-nucleotidase"
                     /protein_id="HCA3356375.1"
                     /translation="MVYMNKKFSISLLSLCIGLSSAISFSADARDITIYYTNDLHAHV
                     TPEIIPYVSKTRPVGGFAPISKIVKDAKAKEKDVFFFDAGDYFTGPFISTLTKGEAII
                     DILNTMPYDAVSVGNHEFDHGHENLVKQLSKLQFPVLLDNVFYSGTDTPLIKEPYTIV
                     EKDGFKIGVIGMHGVSAFYEAIAAGVREGVDCRDPIPYVKKQLEELKGKVDLTVLLAH
                     EGVPGMQSSAGEADVARALKTDVDMAKSLEGYGLNVLITGHAHKGTPEPIKVGDTLVV
                     STDAYTIELGKLVLDWNPETKKVDSYNGKLITMYADTYKPDPVTQAKIDEWDNKVKKI
                     TDEVVAHSPEVLTRSYGESAPTGNLITDALMATVPGADASFYNAGGIRTELPKGNITY
                     GDVLSMYPFTNDVMSMEISGKDLKSIMSHAADLKNGMLHVSKTVQFKYDSTKPLGQRI
                     VEFDIKGKPVEDNKLYTVALDSFIGKGGGGFTFTKGKNIKYIGIQTAPALVNYMKQVN
                     NIQPDHTMRVDDISK"
     gene            complement(31546..32307)
                     /locus_tag="MOX77_000746"
     CDS             complement(31546..32307)
                     /locus_tag="MOX77_000746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356376.1"
                     /translation="MKNKKYINSLLAACVLFSCFNGQAAELKRVYGKLSFGYGDWNKG
                     FVNVDRGEVWKAVADFGAVFDRGEFASFYEMNVLNHPVEGRNHVTQFLGHYRVVEGSN
                     FTAMMKLYMSMENKFGDELNMMYGVGYLGLTSPSGFIKPYFAVHNLSNDYTSKKYGQA
                     TGFNGYVLGWVAAYNFDMFNEKFVISNWNEVEMDRNDAYAEQQGGTTGLNGAVTFTWK
                     FMPRWTASVSYRYFNNKLGYNGYGDRMNYLIGFKF"
     gene            32901..34394
                     /locus_tag="MOX77_000747"
     CDS             32901..34394
                     /locus_tag="MOX77_000747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HCA3356377.1"
                     /translation="MKRTVVASMIELALCAGCVLSTAQAATAKRPNLVIILADDLGYG
                     DLATYGHRIVKTPNIDKLAQEGVKFTDYYAPAPLCSPSRAGLLTGRMPFRTGIRSWIP
                     EGKDVALGRNELTIANLLKQQGYDTAMMGKLHLNAGGDRTDQPQAKDMGFDYTLVNPA
                     GFVTDATLDNAKERPRYGVVHPTGWIRNGQHIGRADKMSGEFVSSEVVNWLDNKKDDN
                     PFFLYVAFTEVHSPLASPKKYLDMYSQYMTDYQKQHPDLFYGDWADKPWRGTGEYYAN
                     ISYMDEQVGKVLDKIKAMGEEDNTIVIFTSDNGPVTREARKVYELKLAGETDGLRGRK
                     DNLWEGGIRVPAIIKYGKHIPQGMVTDTPVYGLDWLPTLANMMDFKLPTDRTYDGQSL
                     VPLLKDKTLKRQKPLIFGIDMPFQDDPTDEWAIRDGDWKMIIDRQNKPKYLYNLKTDR
                     FETLNQIGKQPQIEKQLYGKFLKYKKDIDNDSLMKARGDKPTPVTWG"
     gene            34493..35683
                     /locus_tag="MOX77_000748"
     CDS             34493..35683
                     /locus_tag="MOX77_000748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic sulfatase maturase"
                     /protein_id="HCA3356378.1"
                     /translation="MMFGKSCQVMVKPTGSVCNLDCKYCFYLEKEKLYPDRKNHYKMS
                     EETLELFIRQQIAAQDIDEVIFAWQGGEPTLMGIPFYRKAVEFQQRYCGGKTIVNTFQ
                     TNGILINDDWATFFREHDFLVGVSIDGDAALHDEWRVTRSGKPTHEKVENAVRCLAQH
                     DVEFNTLTVVNRTNMHHPVQVYRYLKSVGSRYMQFIPLVERCGENGLAQPQDKHIAMT
                     PWSVDSLQFGQFLNAVFDIWIREDIGDIGIQLFEQTLAAWCGLPPQVCVFAPTCGSAF
                     AMEMNGDVYNCDHFVYPQFKLGNIHQKTLRQMNQGEQNRQFGSDKQRSMAQECHRCQW
                     KFACYGGCPKHRFLPSASGATNHNYLCAGYQAFFSHTATAMSAMRTLYEKGISLAEIK
                     SIFV"
     gene            35702..36954
                     /locus_tag="MOX77_000749"
                     /pseudo
     CDS             35702..36954
                     /locus_tag="MOX77_000749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459042.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
     gene            37081..38796
                     /locus_tag="MOX77_000750"
     CDS             37081..38796
                     /locus_tag="MOX77_000750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aryl-sulfate sulfotransferase"
                     /protein_id="HCA3356379.1"
                     /translation="MNTLTATSVVLPAPRPAINQGIDINNEIVLNHTAIYENCLAQVT
                     QENTVENALMLLDPYGTAPLSAYAGVWSLEPAEIMVTVQDAAKTAMPVEHLYTLTAGA
                     NLLPVLGLVAETENRIVFSQADTPLAVYTLTTQPLPPVDSAEVVLGFPIINVTQPATD
                     VDKMAPGFYFVTHFDRYNYALDQNGLVRWYVTQDYPSYNFVRIDNGHFLTTSEAKNTY
                     LDMYEFDMMGRLHTFYNLDNQFHHSIWPWDSNTIVAPSEYTSGRPDDLKTNEDGVSVV
                     DLATGLETAYYDMAKVLDTTRVSRPSGTAPGEDPTVKDWLHINQSYVNETNQLLIASG
                     RHQSAVFGVDLQTQALRFILSTHEDWDDAYQPYLLTPVDSEGVALYDFSKQEDIDAAD
                     RDFWTWGQHNVVEIANNTPGIVEFMVFDNGNYRSRDDSKSLLPPDNYSRIVHFVVNMN
                     EMTVMRPFEYGKELGARGYSSCVSAKAIQQNGNIVVHFADCTFDENGRAISCQPGESD
                     IIDPQAGSEAMGLLILQEIAPTEKTVLFEATMTSGYYKNAETNGEGYRYDITSFRVYK
                     MDLYA"
     gene            38959..40125
                     /gene="nhaA"
                     /locus_tag="MOX77_000751"
     CDS             38959..40125
                     /gene="nhaA"
                     /locus_tag="MOX77_000751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaA"
                     /protein_id="HCA3356380.1"
                     /translation="MKHLHRFFSSDASGGIILIIAAALAMLMANMGATSGWYHDFLET
                     PVQLRVGALEINKNMLLWINDALMAVFFLLIGLEVKRELMQGSLASLRQAAFPVIAAI
                     GGMIVPALLYLAFNYSDPVTREGWAIPAATDIAFALGVLALLGSRVPLALKIFLMALA
                     IIDDLGAIIIIALFYTSDLSIVSLGVAAFAIAVLALLNLCGVRRTGVYILVGAVLWTA
                     VLKSGVHATLAGVIVGFFIPLKEKHGRSPAKRLEHVLHPWVAYLILPLFAFANAGVSL
                     QGVTMDGLTSMLPLGIIAGLLIGKPLGISLFCWLALRFKLAHLPQGTTYQQIMAVGIL
                     CGIGFTMSIFIASLAFGNIDPELINWAKLGILIGSLLSAVVGYSWLRARLNAPA"
     gene            40187..41086
                     /gene="nhaR"
                     /locus_tag="MOX77_000752"
     CDS             40187..41086
                     /gene="nhaR"
                     /locus_tag="MOX77_000752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional activator NhaR"
                     /protein_id="HCA3356381.1"
                     /translation="MSMSHINYNHLYYFWHVYKEGSVVGAAEALFLTPQTITGQIKAL
                     EERLQGKLFKRKGRGLEPSELGELVFRYADKMFTLSQEMLDIVNYRKESNLLFDVGVA
                     DALSKRLVSSVLDAAVVVDEPIHLRCFESTHEMLLEQLSQHKLDMIISDCPIDSTQQE
                     GLFSVKIGECSVSFWCTNPLPEKAFPACLEERRLLVPGRRSMLGRKLLNWFNSQGLQV
                     EILGEFDDAALMKAFGATHDAIFVAPSLYSLDFYADESVIEIGRVENVMEEYHAIFAE
                     RMIQHPAVQRICNADYSALFKLQ"
     gene            complement(41141..43180)
                     /locus_tag="MOX77_000753"
     CDS             complement(41141..43180)
                     /locus_tag="MOX77_000753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 31 protein"
                     /protein_id="HCA3356382.1"
                     /translation="MPFMQQDPRRLVWQQNDRYLWIEPWGENSLRVRSGRHLPVMRNE
                     DWALTEPVAESQCHIDYEHHQATLTNGKIIAIVNQKGQVTFYRHPHKPLLQEFWRLRG
                     EIGEDESSHGQYVSALNLEGREFRPIQGGKYSLKARFEATEGEKIYGMGQYQQANLDL
                     KGCVLELAQRNSQASVPFMLSSLGYGFLWNNPAVGRVTFAQNVTEWEAQVSEQLDYWI
                     TAGDTPAEIGRAYALATGTPPMMPDYAMGFWQCKLRYRTQEELLEVAREYKRRNLPIS
                     VIVIDFFHWPNQGDWMFDARDWPDPDAMIAELKSLGIELMVSVWPTVDNRTESYREMR
                     ENGWLVQTERGLPINMDFLGNTTYFDATHPGARDYVWGKAKRNYHDKGVKLFWLDEAE
                     PEFSVYDYDNYRYHAGPVLEVGNIYPRMYAKTFFDGMKADGEDQVINLLRCAWAGSQK
                     YGALVWSGDIHSSFRSLRNQFAAGLNMGIAGIPWWTTDIGGFHGGNIHDPKFHELLIR
                     WFQWGVFSPVMRLHGNRDPQILPAQPYRDGIAQCPTGAPNEVWSYGEEVCDVLTGCLA
                     LREKLKPYIKALMEETHKHNTPVMRPLFFEFPEQETSWTITDQYCFGPDLLIAPVMHE
                     GMRERDVWLPEGETWTDLATGESYSGGQTLHYATPLNRIPVFIREGGQYRSLLNL"
     gene            complement(43220..44593)
                     /locus_tag="MOX77_000754"
     CDS             complement(43220..44593)
                     /locus_tag="MOX77_000754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3356383.1"
                     /translation="MSSVIEDTQPSGSASLSLLQRISYGSLDVAGNLLYCFGSTYILY
                     FYTDVAGISLAVAGIILLLARIVDGIDAPIWGIIIDKTRSRYGKCRPWFLWLPLPFAV
                     FSALSFWSPDISITGKAIYAAISYMIASILFTGLNTPLSAILPLMTLSPKERLVLNSW
                     RMTGGQIGVLLMNATALPLVAFLGNGDDHAGFIYTAITFAIISCALTLFAFKNIREMD
                     ADKIQHEPKLPMKKSFAAMKGNWPWILMVLANLIFWIALQQRSTTIVYYLTYNLDRKD
                     LVPLINSLATIQILFIIAIPFFSKYLAKTWIWVGGLLVATFGGVMMWLAADNITFLIA
                     AWILGNIGSGIACSMPFAMLGFAVDFGAWKTGIKATGILIAFGSTFCIKMGSGLGTAL
                     AAWIMNSFGYVPNHAQSAAGLEGITWAFIWAPALLFALAAIPLLFFRKYEAMEEKIRH
                     DLETINS"
     gene            complement(44751..44996)
                     /locus_tag="MOX77_000755"
     CDS             complement(44751..44996)
                     /locus_tag="MOX77_000755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356384.1"
                     /translation="MPAICRFSRQPLALTSLVHALPVPAYFFSYPSLSHVILESYFLS
                     LFSFSYFITEKTVTTLANKNIAHLKTNKRNPDVRFNN"
     gene            complement(45050..45313)
                     /gene="rpsT"
                     /locus_tag="MOX77_000756"
     CDS             complement(45050..45313)
                     /gene="rpsT"
                     /locus_tag="MOX77_000756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006117633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HCA3356385.1"
                     /translation="MANIKSAKKRAVQSEKARKHNASRRSMMRTFIKKVYAAIEAGDK
                     AAALKAFNEMQPIVDRQAAKGLIHKNKAARHKANLTAQINKLA"
     gene            45419..45634
                     /locus_tag="MOX77_000757"
     CDS             45419..45634
                     /locus_tag="MOX77_000757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2575 domain-containing protein"
                     /protein_id="HCA3356386.1"
                     /translation="MQHSLRSDGAGFYQLACCEYSLSMRKIALSGGFWGGVCRMAMKS
                     IFFMFHQGNRRLTLTAVQGILLRFSLF"
     gene            45642..46580
                     /gene="ribF"
                     /locus_tag="MOX77_000758"
     CDS             45642..46580
                     /gene="ribF"
                     /locus_tag="MOX77_000758"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HCA3356387.1"
                     /translation="MKLIRGIHNLSQAPHGCVLTIGNFDGVHRGHRALLQGLQEEGRR
                     RGLPVVVMIFEPQPLELFATDKAPARLTRLREKLHYLAQCGVDYVLCVKFDRRFAALT
                     AQTFISELLVERLGVQFLAVGDDFRFGASRAGDFLLLQKAGAEYGFAVSSTQTFCEGG
                     VRISSTAVRQALAEDNLALAESLLGHPFTISGRVVHGDELGRTIGFPTANLPLRRQVS
                     PVKGVYAVEVTGLGDKPLPGVANIGTRPTVAGVRQQLEVHLLDVVMDLYGRHIDVILR
                     KKIRNEQRFASLDELKAQIARDELTARKFFGLAGQV"
     gene            46625..49459
                     /gene="ileS"
                     /locus_tag="MOX77_000759"
     CDS             46625..49459
                     /gene="ileS"
                     /locus_tag="MOX77_000759"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HCA3356388.1"
                     /translation="MSDYKSTLNLPETGFPMRGDLAKREPGMLARWTDDDLYGIIRAA
                     KKGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGFDSPYVPGWDCHGLPI
                     ELKVEQEFGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFK
                     TEANIIRALGRIIKNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFRAVD
                     QDAVKAKFGLPGVSGPVSLVIWTTTPWTLPANRAISLAPDFDYALVQIDGQAVILAKD
                     LVESVIQRIGAAEYTILGTVKGAELELLRFTHPFMGFDVPAILGDHVTLDAGTGAVHT
                     APGHGPDDYVIGQKYGLETANPVGPDGAYLPGTYPTLDGVNVFKANDIVIELLKEKGA
                     LLHVEKMQHSYPCCWRHKTPIIFRATPQWFVSMDKEGLRQQSLKEIKGVQWIPDWGQA
                     RIESMVANRPDWCISRQRTWGVPMSLFVHKETQELLPIERTLAAMEEVAKRVEVDGIQ
                     AWWDLDPKEILGEDADQYEKVPDTLDVWFDSGSTSYSVVDARPEFAGHAADMYLEGSD
                     QHRGWFMSSLMISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGA
                     DILRLWVASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFNPATDMVKPEE
                     MVVLDRWAVGCAKTAQQEILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTA
                     KADSVARRSCQTALYHIAEALVRWMAPIMSFTADEIWGYLPGEREKYVFTGEWYDGLF
                     GLEENEEFNDAFWDDVRYIKDQVNKELENQKANGIKSNLEAKVTLKYADDANGTIKKL
                     KLLGEEVRFIFITSQFVISEQAGGIDDENIQYNAGNTTVQAVVTRAEGDKCPRCWHYT
                     TDVGKVAEHADICGRCVSNIAGNGEQRKFA"
     gene            49459..49959
                     /gene="lspA"
                     /locus_tag="MOX77_000760"
     CDS             49459..49959
                     /gene="lspA"
                     /locus_tag="MOX77_000760"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HCA3356389.1"
                     /translation="MSKPLCSTGLRWLWLVVVVLIIDLGSKYLILQNFALGDTVGLFP
                     SLNLHYARNYGAAFSFLADSGSWQRWFFAGIAIGICVILLVMMYRSKATQKLNNIAYA
                     LIIGGALGNLFDRLWHGFVVDMIDFYVGDWHFATFNLADTAICIGAALIVLEGFLPKP
                     TAKEQA"
     gene            50114..50563
                     /gene="fkpB"
                     /locus_tag="MOX77_000761"
     CDS             50114..50563
                     /gene="fkpB"
                     /locus_tag="MOX77_000761"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HCA3356390.1"
                     /translation="MSKSVQSNSAILVHFTLKLDDGSTAESTRNNGKPALFRLGDTSL
                     SEGLEQQLLGLKEGEKKAFSLEPDAAFGVPSPDLIQYFSRREFMAAGEPEVGAIMLFT
                     AMDGSEMPGVIREINGDSITVDFNHPLAGHTVHFDIEVLEIDPALEA"
     gene            50566..51516
                     /gene="ispH"
                     /locus_tag="MOX77_000762"
                     /gene_synonym="lytB"
     CDS             50566..51516
                     /gene="ispH"
                     /locus_tag="MOX77_000762"
                     /gene_synonym="lytB"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HCA3356391.1"
                     /translation="MQILLANPRGFCAGVDRAISIVENALAIYGAPIYVRHEVVHNRY
                     VVDSLRQRGAIFIEQISEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKV
                     HMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGMYLVESPEDVWTLNVKNEGK
                     LSFMTQTTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQADVVL
                     VVGSKNSSNSNRLAELAQRMGRTAFLIDDAADIQEAWVKDAACVGVTAGASAPDILVQ
                     NVIARLREFGGGEAVTLEGREENIVFEVPKELRVDVREVE"
     gene            51716..52918
                     /locus_tag="MOX77_000763"
     CDS             51716..52918
                     /locus_tag="MOX77_000763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite reductase"
                     /protein_id="HCA3356392.1"
                     /translation="MGKIKYRLPTLLAIGFWMDAASATVLELPAWERNYTGTIAGKPV
                     NVNITRFGNTLYGHYCYEPCNQHKAVIVLRGSLQDKEVHLEERVKALSGYWNAEISSS
                     EIKGEWTSADKKRHFPVALIYYKPKNSPDIVLVTNTNDAGGYDPSKEIDCGNTPAISA
                     IKLYRDGKLIQTLDTASVGTCSPFMPQWGDVNFDGYPDLSIVTELLAGPDAPVQTWLY
                     DPAKQRYVDAPASYQEITSPEIDAEHKQIVSYWRGGCCSHGVNVYRWKGKTIELIDRG
                     ESYFQPVISKGKMYNCYMTPSYADGRIIYPLVRKNGHLTPPLSLDGTCQSFWLTGNVR
                     TVIQAEKPGAEPESLEIQWQENKASPGRFCPLVPFVEGDKLSPRLVTDDDVPDTCISR
                     AEYEDIKQ"
     gene            52934..53854
                     /gene="rihC"
                     /locus_tag="MOX77_000764"
     CDS             52934..53854
                     /gene="rihC"
                     /locus_tag="MOX77_000764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside hydrolase RihC"
                     /protein_id="HCA3356393.1"
                     /translation="MTASLHIILDTDPGIDDAAAIAAALFAPQLDLQLITTVAGNVSV
                     EKTTRNALQLLHFWNSDIPLAQGAATPLLRPLRDAAYVHGESGMEGYDFVDHQRQPLA
                     KPAFIAIRDVLMNAPEPMTLVAIGPLTNIALLLMHYPECACNIRRLVLMGGSAGRGNF
                     TPNAEFNIAVDPEAAALVFRSGLEIVMCGLDVTNQAMLSPDFLNKLPALNRTGKMLHS
                     LFNHYRSGSMRTGVRMHDLCAIAWLVRPELFTLQSCFVAVETQGEYTAGTTVVDIEGR
                     LGQPANAQVALALDVDGFRQWVAEVFAYVP"
     gene            complement(53876..54562)
                     /locus_tag="MOX77_000765"
     CDS             complement(53876..54562)
                     /locus_tag="MOX77_000765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HCA3356394.1"
                     /translation="MDSITTLIVEDEPMLAEILVDTIKLFPQFSIVGIADKLESAKKQ
                     IRLYQPQLILLDNFLPDGKGIDLIRHTISTNYTGRIIFITADNHMDTISDALRMGVFD
                     YLIKPVHYQRLQHTLERFTRYRSSLRSSEQANQTHVDALFNIQAKEQTAEPNSGLRGI
                     DENTFNRVRQIFADPQAVHTADTLAQILGSSKTTARRYLEQGVKNNFLEAEISYGKVG
                     RPERLYRGKV"
     gene            complement(54564..56183)
                     /locus_tag="MOX77_000766"
     CDS             complement(54564..56183)
                     /locus_tag="MOX77_000766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HCA3356395.1"
                     /translation="MFIREITHWFARRSFQNRIFLLILFTSTIVMLAITWYLTDITKE
                     RLHYQVGQRALIQAMQISAMPELVEAVEAHDLSRIKALIDPMRSFSDATYITVGNEKG
                     QRLYHVNPDEIGKYMEGGDSDDALYNAKSYVSVRKGSLGSSLRGKSPIQDSTGKVIGI
                     VSVGYTLEQLESWLNLQISSLLFPMAILLLVLLYCARRFSLHIKKQMLNMEPQQLSQL
                     LIQQSVLFESVFEGLIAIDSHHRITAINQTARRLLNLSQPESELIGYAIHHIVLPEAF
                     FYDAPQKNKKDEIVTFNQMKVIASRMAVIIDNQPQGWVISFRNKDDINTLNLQLSQVR
                     QYADNLRAVQHEHRNLISTIAGLLFLKRYDNALALIQQQSESHQKVLDFISHNFRDHH
                     LAGLLIGKYYRAKELGLELIFDPSSFVEHLPSSLSHNEWISIVGNLLDNAYNATLLNR
                     EGSRQIECLINSEGNEVIIEVADQGCGIDENIRQHIFERGVTTHNNGDHGIGLWLVHS
                     YVKQANGDIIVDNNNSFGTIFTLYIPFTREE"
     gene            complement(56318..>56983)
                     /locus_tag="MOX77_000767"
     CDS             complement(56318..>56983)
                     /locus_tag="MOX77_000767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium ion-translocating decarboxylase subunit
                     beta"
                     /protein_id="HCA3356396.1"
                     /translation="KLAPELLGAIAVAAYSYMALVPLIQPPIMRALTSEKERKIRMVQ
                     LRTVSKREKILFPVVLLLLVALLLPDAAPLLGMFCFGNLMRESGVVERLSDTVQNGLI
                     NIVTIFLGLSVGAKLVADKFLQPQMLGILLLGVIAFGIGTAAGVLMAKLLNLCSKNKI
                     NPLIGSAGVSAVPMAARVSNKVGLESDAQNFLLMHAMGPNVAGVIGSAIAAGVMLKYV
                     LAM"
BASE COUNT        14187 a        13448 c        14823 g        14525 t
ORIGIN      
        1 cgcctggctg cgggctaagg ctgcctttca gactgcggct aaattggcga atataacgaa
       61 actgaatgaa tccggtacgc caggtaaacc aacatcctgc gccgagcagc aggtaaatca
      121 ttaccgagcc ccagagtatt tcgttaataa aactgaaaaa ctcaggcatt aacgtccctc
      181 ttgttgatgc cgacacgctt tgatgatcct gtataagcgt gacccatgat gtagatgacc
      241 ttgtcaggct aatattaacg gtagtttacc ataaatacgg cggtatcctt taattgcgca
      301 tcaaccgtcg gcagatacgc aaacagttca caagggcagc caggtgcatg taggcggttg
      361 cgctgtgagt gcgtcgtgtt atcatcaggg tagaccggtt acatccccta acaagctgtt
      421 taaagagaaa ctctatcatg acggacaaat tgacctccct tcgtcagttc accaccgtag
      481 tggctgatac cggagatatc gcggcaatga agctgtacca gccgcaggat gctacaacta
      541 acccttctct cattcttaac gcagcgcaaa tcccggaata tcgtaagctg attgacgatg
      601 ctgtcgcctg ggcgaaacag cagagcagcg accgcgcgca gcaggttgtt gacgcgaccg
      661 ataagctggc ggtgaatatt ggcctggaaa tcctgaagct ggtgccgggg cgtatttcta
      721 ccgaagttga cgcgcgtcta tcttatgaca ctgaagcgtc tatcgccaaa gcaaaacgta
      781 tcattaaact ctacaatgat gcgggtatca gcaacgatcg tatcctgatc aagctggcgt
      841 ccacctggca gggcattcgc gcagccgaac agctggaaaa agaaggcatc aactgtaacc
      901 tgacgctgct gttctccttc gcgcaggcgc gtgcgtgcgc cgaagcgggc gtctacctga
      961 tctcgccgtt cgtaggtcgt attcttgact ggtataaagc caataccgac aagaaagact
     1021 atgcgccagc tgaagatccg ggcgtggttt ccgtaacgga aatctacgag tactacaaac
     1081 agcatggtta cgaaaccgtc gttatgggcg caagcttccg taacgtaggc gaaattctgg
     1141 agctggcggg ctgcgaccgt ctgactatcg cgccggcatt gctgaaagaa ctggcggaaa
     1201 gcgaaggggc gattgagcgt aagctctctt tctccggcga agtcaaagcg cgtccggaac
     1261 gtattaccga agccgagttc ctgtggcagc atcaccagga ccctatggcg gttgacaaac
     1321 tggcggatgg tatccgtaag tttgcggtag accaggaaaa actggaaaaa atgatcggcg
     1381 atctgctgta atcattaacg cgtggccctg atatgggtca cgctacctct tctgaaacct
     1441 gtctgtcctt cctttcgcag tgtatcattc tgtttaacga gactgtttaa acggaataat
     1501 catgaatact ttacgcattg gcctggtttc catttctgac cgtgcttcca gcggcgttta
     1561 ccaggataaa ggtatcccgg cccttgaaga gtggctggca tctgccctta ccaccccttt
     1621 tgagctgcaa acgcgactga tcccggatga acaggcgatc atcgaacaga ccttatgtga
     1681 actggttgat gagatgagct gtcatctggt gctgaccact ggcggtaccg gtccggcacg
     1741 tcgcgacgtc acgccggacg cgacccttgc catcgccgac cgtgaaatgc ctggttttgg
     1801 cgaacagatg cgccagatca gcctgcgctt tgtgccgacc gccattcttt cccgccaggt
     1861 gggcgttatc cgtaaacagg cgttaattct taatctgcct ggacagccaa aatcgatcaa
     1921 agaaacgctg gaaggcgtaa aagcggacga tggcagcgtt agcgtgccgg gcatttttgc
     1981 gagcgtgccg tattgcatac agctgcttga cgggccgtat gtcgaaaccg cgccggaagt
     2041 ggttgccgct ttccgtccaa agagcgccag acgtgagaat atgtcgtcct gaccgggaga
     2101 tactgatagt agggttattc ctcccggtgc gggaggaata aaagagattt agtgcgcctc
     2161 gccgattggc aaaatagtgc ggccaaattg ctcgtttagc acttcaccca tcgccagata
     2221 aatagcgctg gcgccgcaaa ccagaccaac ccagcctgcg atatggatag ttgcttcgtt
     2281 accggtgata ttgccgaccg ccagcagagc gaacagtacg gtcaggctca ggaaaacaaa
     2341 ttgcagcgcg cgggcggctt tcagcgtacc gaagaacata aacagcgtga acacgcccca
     2401 cagacctaaa taagcgccga gtagctgagc gtcaggcgca tccgtcaggc ccattttcgg
     2461 catcagcagg atagcgacca gcgtcagcca gaacgaaccg taagaagtaa aggccgttaa
     2521 accaaaggta ttgccttttt tatactccag cagaccggca aaaatttgcg cgataccgcc
     2581 gtagaaaatc cccatcgcca gaataatacc gtccagggcg aaaaaaccgg cattgtgcag
     2641 gttaagcaga atggtggtca tgccgaagcc catcaggccc agcggtgccg gattagccaa
     2701 cttagtgttg cccataattc ctcaaaatca tcataattga atggtgaaat agtttcccag
     2761 aataacgagt tccgtattcg gggcgcggca taataatcag ggggaagagg actgtctatg
     2821 atctaataag ggggaaaaga aaatatttcc ccctgtgagg gcattcacgc ctgaacggct
     2881 gccatcattc gtcgcaggca ggctatttgc aagaccgccg gaatagtcac gcgatacgcg
     2941 ctgccgctca tcgctttgac gccgtttaat gccgcgccga ccgggccgcc aagacctgcg
     3001 ccgcgcagca atccgtggcc caggatgctc attgcggcat gggtacgtaa aatgcgggta
     3061 agctgggtgg aaagcaggtg ggagacccct tttgccagac tgcgatcttt catgagcagc
     3121 ggcagcagtt cttccagttc agaaactttg gcgtctacgg cttgcagaaa ttcctgctta
     3181 tgcgccgcgt ccatcttctg ccaggtatga cgtaaaaaat gctccagcag ttgctgttct
     3241 atttcaaacg tcgacatgct tttatctgct ttaagtttta gccgttttgc gacatccagc
     3301 agaatcgcgc ggtactgttt tccgtgtccg cgcaatttgt tggcgatact gtcgccgccg
     3361 taatgctgaa actcgccggc aatgagctgc cagttacggc ggtgttgctc cgggtgacct
     3421 tccatcgctt tgaacagctc gttatgacta aggacgctcg acaagcgagc tttgcccttt
     3481 tcgttatgcg tcagcaaacg ggcgaaatcg gcgagttgtt cttcgctaca atgctgaaga
     3541 aagtctaaat cctcgtcgtg taaataggtg acgttcattt tcagtctggc ttttggaata
     3601 gaaataacag cgattaatcg tcgccaatga ctttaagtct cgccatatcg gaagaattta
     3661 ccgtatgacc tgagaaggta atctttgata cgcagcgttt gttgtcgtta tcgctattaa
     3721 tattgatcca gcctgtcgtc tggccttctt tgattgagga agggacgttc aggctttggc
     3781 tggcgctacg cgcagtttta aaatagacgg atgcgccgct aagttcgata tcgccgtgat
     3841 ccgccgtgag ttgaatgcgc ttcacgatgc ggcagacggg aattttcagc gcgagatcgt
     3901 tcgtttcatt tctgggcatg gcaataacac ccagtatttt atggtcgttc gcgtgcgcga
     3961 cgctacttaa cgccaggccg aaaagcaggc cgacggaaat cgttaacaca gatcgcatga
     4021 aatttctctt tgacgggttc aataagcaat taccgtctat catactctgc tcatgacaac
     4081 gattcagttt tgtaatcttt tctttttatt acaatttttc cgtgaatggt attcgttgtt
     4141 taatttattt tatgaatgtt tacctgtctg gttttccatc gcgccctctc gtcaataaaa
     4201 aattttttca tctccccctt gatgacgtgg gttacgaccc catcttgtag tcaaccgcag
     4261 tggtgagtct gaaaaaaaac gattcagggt agttgaaacc gcacgtttcg cccttattac
     4321 agattcacaa ccacatgatg accgaatttt tagtggagac gtttagatgg gtaaaattat
     4381 tggtatcgac ctgggtacta ccaactcttg tgtagcgatt atggatggaa cgcaggcacg
     4441 cgtgctggag aacgccgagg gcgatcgcac tacgccttct atcattgctt atacccagga
     4501 tggtgaaact ctggttggtc agccggctaa acgtcaggca gtgacaaacc cgcaaaacac
     4561 cctgtttgcg attaaacgcc tgattggccg ccgcttccag gacgaagaag ttcaacgtga
     4621 cgtttctatc atgccgtaca aaatcatcgg cgccgacaac ggcgacgcat ggcttgatgt
     4681 gaaaggtcag aaaatggcgc cgccgcagat ttctgccgaa gtgctgaaga aaatgaagaa
     4741 aacggctgaa gattatctgg gcgaaccggt aactgaagcg gttatcaccg taccggctta
     4801 ctttaacgat gcgcagcgtc aggctaccaa agatgctggt cgtatcgcgg ggctggaagt
     4861 taaacgtatc atcaacgaac cgactgccgc agcgctggct tacggtctgg ataaagaagt
     4921 cggcaaccgt actatcgcgg tttacgacct cggtggtggt actttcgata tctctattat
     4981 cgaaatcgac gaagttgatg gcgaaaaaac ctttgaagtt ctggcaacca acggtgatac
     5041 ccacctgggt ggtgaagact tcgatacccg cctgatcaac tacctcgttg acgagtttaa
     5101 gaaagatcag ggcatcgacc tgcgtaacga tccgctggcc atgcagcgcc tgaaagaagc
     5161 cgcagaaaaa gccaaaatcg agctgtcttc tgcgcagcag accgacgtga acctgccgta
     5221 cattaccgca gatgccaccg gtccgaaaca tatgaacatc aaagtgaccc gtgcgaaact
     5281 ggaaagcctg gttgaagatc tggtgaaccg ttctatcgag ccgctgaaag tcgcactgca
     5341 ggacgctggc ctgtccgtgt ctgatatcaa cgacgtgatc ctcgtcggcg gtcagacccg
     5401 tatgccaatg gtgcagaaaa aagtggctga gttcttcggt aaagagccgc gtaaagacgt
     5461 taacccggac gaagctgtgg ctatcggcgc agcggtacag ggcggcgtat tgaccggtga
     5521 tgtgaaagac gtactgctgc tggacgttac cccgctgtct ctgggtatcg aaacgatggg
     5581 tggcgtgatg actccgctta tcaccaaaaa caccaccatc ccgaccaagc acagccaggt
     5641 gttctctact gcggaagaca accagtctgc ggtaaccatc catgtgctgc agggtgagcg
     5701 taaacgtgcg tctgataaca aatctctggg tcagttcaac ctggatggca tcaacccggc
     5761 gccgcgcggt atgccgcaga tcgaagtcac cttcgatatc gatgctgacg gtatcctgca
     5821 cgtctccgcg aaagataaaa atagcggtaa agagcagaag atcactatca aggcgtcttc
     5881 tggtctgaac gaggaagaaa ttcagaaaat ggttcgcgat gcagaagcga acgctgaatc
     5941 cgaccgtaag ttcgaagagc tggttcagac ccgtaaccag ggtgaccatc tgctgcacag
     6001 cacccgtaag caggttgaag aagcaggcga taaactgccg gctgatgaca aaaccgctat
     6061 cgagtctgcg ctgagcgcgc tggaaactgc cctgaaaggc gaagataaag ccgctatcga
     6121 agcgaaaatg caggagctgg cgcaggtttc ccagaaactg atggaaatcg ctcagcagca
     6181 acatgcgcag cagcaggctg gctccgccga cgcttctgca aacaatgcga aagatgacga
     6241 cgttgtcgac gctgagtttg aagaagtaaa agataaaaaa taatcgccct ttgaacgggt
     6301 aattactggc acgggcgaag aggtttcctc tccgcccgtg tatgcatgtt aagggcagat
     6361 aaaaagagat ggcgaaaaga gattactacg agattttagg cgtttccaaa acagcggaag
     6421 agcgtgaaat caaaaaggcg tataagcgcc tggccatgaa atatcatccg gaccgcaatc
     6481 agggtgataa agaggccgaa gctaagttta aagagattaa agaagcctac gaagtgctga
     6541 ccgatgcgca aaaacgcgca gcctacgatc agtatggtca cgccgcgttt gaacaaggcg
     6601 ggatgggcgg cggatttggc ggcggcttta atggcggcgc tgatttcagt gatatctttg
     6661 gtgacgtttt tggcgatatc tttggcggcg ggcgtggtcg ccaacgtgcg gcgcgtgggg
     6721 ctgatttgcg ttataacatg gatctcaccc tggaagaagc ggtgcgtggc gtgaccaaag
     6781 agatccgtat tccgacgctg gaggagtgcg acgtttgcca cggcagcggc gcgaaagctg
     6841 gtacgcaacc gcaaacctgt ccgacctgtc atggttctgg tcaggtacag atgcgccagg
     6901 gattctttgc tgtacagcag acctgcccac actgtcaggg ccgcggtacg ctgatcaaag
     6961 atccgtgcca taaatgtcac ggtcatgggc gtgttgaaaa gagtaaaact ctgtccgtta
     7021 aaatcccggc gggcgtggat accggcgatc gtattcgtct ggcaggcgag ggcgaagcgg
     7081 gcgagcatgg cgcaccggca ggcgacttgt acgttcaggt ccaggtgaaa caacacccta
     7141 ttttcgagcg tgaaggcaat aatctttatt gcgaagtgcc gatcaacttt gcgatggcgg
     7201 cgctcggcgg tgaaattgaa gtgccgacgt tagatggtcg cgtgatgctg aaagtaccga
     7261 gcgaaacaca aacgggcaag ctgttccgta tgcgcggcaa aggcgtgaag tccgtacgcg
     7321 gtggcgcgca gggcgatttg ctgtgccgtg tggtagttga aacgccggtc ggtctgagcg
     7381 aaaaacagaa gcaattgcta aaagatcttc aggaaagttt tggcggcccg acgggagaga
     7441 aaaacagccc gcgttcaaaa agcttctttg acggcgtgaa aaaattcttt gacgatttga
     7501 ctcgctaacc tttttcccgt tgtatttttc ttcagcccgg gtgtatgtat atccgggctt
     7561 tttttctgcc tgtacgcgcc caggcttctg ctaaacgcat cgtatcctct catttgttgg
     7621 tattttgttt tactgataaa caaattgatg ttaatcagca ggtttgcata cgctcatttt
     7681 aaaaaaaaat gtaatgtgat gacattaacg attgcttttt tagacgctgt gaattgattt
     7741 atcttgagta ttatctatat tgcttttttt agtttccgga ggcagacagc gaatgggatc
     7801 gaaaggtgcc aacaagagct ttgattataa tttaatcaaa attcttgacg ctgttatttt
     7861 gtcaggaaat gcggctatgg cggcaaaaaa gttaggcatt acaccggctg ccgtttctct
     7921 ggcgttaaag cgcctgcaga gttattaccc ggaagaactg tttagcagag ggaaaggcgg
     7981 gctcatcccc actgctaagg ctgtcgacat tcaccaaaat ttcagtcagg tgatgaaact
     8041 ggtggatgac acatttctct gtaatagcaa aaaagatgaa gcgttccaga taacgttatt
     8101 aggcagtgat attgttgaaa gctattatct ttctcagctc tataacagcg atatatttga
     8161 ccgtattttg ataaatcatt tctccgtcag aaatatgagt cgggagcata tcagcgaact
     8221 tctgtttact gcgcaaggcg atctgttgat tagtgccgaa cctttgctgg agtccggcat
     8281 agagaatcaa atcattgata gttttaaatc atttgtttgt atctgtagca gtaaacacat
     8341 gctgagtacc ctctcgcaac tgtcgctaca tcatttttat tcttcgcgtc atgcgttata
     8401 tcagccgggg atgggggctt cagtgatata tcatgatagc gagttattta aggatgagct
     8461 ttactatact ggcaggcgta ttgtcggcta tcgtagtgat tcacttaacg gtttgatgag
     8521 catgatcgaa cgaacctcat tgattgcatt gatgcctttg aaattagcgc ttttttataa
     8581 aaatcatcgt aaatatgaca ttaaatttat tcagcctccg cccgaactgg cctttaagtc
     8641 agttcaggtc tatgcatcct ggaagaaaaa tagtagaaat atatcgacga ttaatgagat
     8701 ggtaagtatg ttgcaaacac tttcctcctt ccgtcgctaa cacacctcat ttttacgctt
     8761 tgatttaata tggttttaaa tgatgtgctt tgatttttac ccttctgaca gggcgcttac
     8821 actccttgtg ttaattattc atttataatg atttcggggt gttaaaatgt ctattcccaa
     8881 ccatgtgtcg acaacggaag ttgtgctatt ggagctagag atcttactca ctattatttc
     8941 gattggcgcg tggggaggct ttgttagcta tcttttacgc aaagataaga cagaatataa
     9001 tagttctcat gaaagtatta aatattgctt aacgcagatc gtgatttcct gcttcaccag
     9061 ctttttgtta agcgcgattg cgatcgaaaa agaatgcagt ttcaatattg tcctgttggc
     9121 ggcaggctta ggcggtgttt tcgcgagtcc gatcttaaaa attcttgggc ggcgaattaa
     9181 aaaaattatc ggaggaaata attcagatta attgtcattc gcaatatcag gctcatccgt
     9241 gagcctttta cgcgtctttt ttcagcctgg tctaggtcac tctgttcttg atccagccat
     9301 aaataaattg ttcgttattg tggtttttct cagcaacgtt taagtagtac atgccctgac
     9361 tgcaattgag ggctttcacc aaaacggctt ccccttcctg gcctcgccag gccaaataat
     9421 gttcgagagc ggcaagcgtc cgcgggccaa tattgccatc cacatgaaca tccgggtagc
     9481 gtttaccttc gtgattaaag acgttcagcc agcgttgcag ccacgcgctg gggtggtaat
     9541 cgcctatgtt gactgccgca tcgcacagct cgaatgagac tggccacgat agcgtcgaga
     9601 tgacatcaaa gcctggtttt atccagtaat cctcttcgag aatcgcgtag gcttcagcgt
     9661 gggtcagatc ccgcatatcg ccagcatagc catgcgctcg cgccgtggct tcggtaatgc
     9721 cccaatgagt ggcgccgcct ttatctttag ggttaaatac gtaaccgcct tcaagcgcaa
     9781 taattccatc tataattgga ttcatcttcc ctttccttcg cttagtgaat atgcagatac
     9841 atgagagaac ctaacgttac tgaaaatacg gtcgtcaggg cagcgatggt ttgccgtaca
     9901 atctgttttt ttcttccctt tgtttcgcta tccgtcgcga taatggcgat atcactattt
     9961 actttgagac cttgtcttgg aatggtaata aaaagatcat taataccaag cgctttaagg
    10021 tcacgtctga ttaaatagag aatctgcgtt agatttgcat cattaacata gtggcttcga
    10081 cttccccata acgcagtggt tattttttgt cgctcgataa tctccagatg agcattctcg
    10141 atgatgaaac tgagacattt ggctctcatc gcagtcattt taataacctg tgaatttgag
    10201 accgtcctca gttcatattt accttcattg taaatgcaat tgctattaat gatataagtt
    10261 ttcataacgt cttcctttag aaatgtacat cctggttgtc tgtggtgact atattgtatg
    10321 agaaatgtct taatccaata aatgtcactg gttttattgt attgtcattg tctatagcga
    10381 gtgtaatcac attatttcat tgtaattaaa tgatatttaa ttacatgata aatgatattt
    10441 actatgttct caccagaacg gagtaagcgg gcgctgagag gtgttgtttt ctcttcgtca
    10501 gacggtgttg ttaacctcat ttttatgatt tttatatcat ctaaaaaggt gatgttttgt
    10561 gattagctat tttttatgcc tgtagcgatt atggaccccg cagaacgagc tgcgacaatt
    10621 ttgaaacgta aaaggaaatt tgaaaatggc tacaagcaaa ctgattcaag gcgatacgat
    10681 tactgaaact acccatgcag cgaatggttt tgaccctgca acaagcgatg ataaaataag
    10741 ctatacttcc gctcgtgttg cgaaaccggt atacaataaa tataaaaatt ccacgactaa
    10801 gccgaaggta ttcggttatt acaccgactg gtcacagtat gacagccgtc tgcaaggcaa
    10861 tatgtcccaa ccgggccgtg gttgtgattt aaccaatgtt tcaccgacgg cttatgacaa
    10921 actgattttt ggttttgttg gtatcaccgg tttcagaaaa attgataaag aagaccgcga
    10981 cgtcgtagca gaagcggcag cgctgtgcgg caaagtgaaa tatgagccga ccttcctcga
    11041 tccgtggggc gatttccagt cttatatcaa cctgggtttt gaaaccagcg gctgggatgt
    11101 tgatccgaaa accgtgaccc aggctaacgc taaaggtatg ctgggcgcgc tgcgtgatat
    11161 gcaggcaaaa gcgaaagctg caggtcacac gctggcgctc tccatgagta tcggcggctg
    11221 gagcatgagt aacgggttcc acgaaaccgc cgcttctgac tcttctcgta aaaccttcgc
    11281 caaaggcgtg gtgaaactgt tcaaacagtt cccgatgttc agcgaagtgg atattgactg
    11341 ggaatacccg aacgatgaag gggcgggcaa cccgtttggc gcagaagatg gcgctaacta
    11401 cgcgctgctg attgccgaac tgcgtaaaca gctggattcc gcgggtctga gcaatgtgaa
    11461 gatctctatc gcggcctccg cggtgaccac gatttttgat cacgctaaag taaaagatct
    11521 gttggctgct ggcctatacg gcatcaacct gatgacctat gacttcttcg gtacgccgtg
    11581 ggcggaaacg ctgggccacc acactaaccg caaagcgctg gaagagggcg gctgggctgt
    11641 cgaaaccatc gttgatcacc tgctggcgga aggtttctcc gctgaccgta tcaacatcgg
    11701 ttatgccggc tatacccgta acgctcgtca ggtagaaatt gaatccctgt cgccgctgaa
    11761 aggttcttac aacccaggtt caggcgatac taccggttcc ttcgaatccg gcaccagcga
    11821 atggtatgac gtcatttata gctacctgga tctggaaaac cagaaaggcc gtaacggttt
    11881 caacgtttac accgaccagg tcgctgacgc tgactacctg tatagcccgg aatccaaact
    11941 gtttttatcc ctggatacgc cgcgtactgt caaagcaaaa ggcgaatatg cagcgaaact
    12001 gggcctgggc ggcgtgttta cctggactat cgatcaggac aacggcgtgc tggttaacgc
    12061 cgtgcgtgaa ggtctgggtt atgaaatcga atctgaagtt atcgatatgg aaccgttcta
    12121 cttcgaaggt atcaatgtag aaaaagatga cgagcagagc gatagcgacg acgcgcagaa
    12181 ggtcaaccac gcgccgaaag cggcgattga actgatggtc gtaggcggat cgacggtaca
    12241 gctgtctggc gcaggttctt ctgatgaaga taacgatgag ctgtccttta gctggggcgt
    12301 gccttctcaa atcgatgtgg cagacaaaac ggcagaaatc attgaggttg tggtaccgga
    12361 agttagcgaa aaaacagcct ttcagttcac cctgtttgta cgcgactgct acaacgaacc
    12421 gtcctctcaa cagcgctttg ttctgacggc ggtgcctgcg ctatctcagg ttcaaccgga
    12481 accggaagag gaagaagaga ttatcgttcc tgtaccggac gaggaagaag agaccacgcc
    12541 ggctgaggat gatacgtcag cagatgacaa aacgtcacct tacgcgcagt gggatgcttc
    12601 taccgtttat ggcgcaaact ggggttcttt cgaaatcgtt agctggaaag gccataacta
    12661 tcaggtgaaa tggtggtcta tgggcaacca gcctgacctg aactgtggtg tcggcggtgc
    12721 atggaccgat cttggcgctt actaatacac ggtattaagc cgatgtattg ggcttcatga
    12781 ttcaagcccc ggtttaccgg ggcttttctc caccagggac agaggaagag cagaccatga
    12841 ccatttccat ccatgccagc gcatttgacg tcaacagctg gtatcaaaaa atcaccttaa
    12901 ccttcatcaa tgagagcggt aatccggtcg atatgaacca tgccgcaata tcattcacgg
    12961 cttccgggca catcgatcca tggggaaata gcggcggtac gctcaaaggg aacccgccgc
    13021 ttacgctgaa tgatagttcg tatggcacgc tggaaactaa caacatcatc attaataaca
    13081 gcgatgcatt acttcttcag ccgggcgaac gcggaacgct ctctttcagc ctcgcggcga
    13141 cgcaggtgcc ggtaaaaatg tccgccgtca ccttgacgct ggcgtcatcg tcatccgaag
    13201 acgcagagtc tgcaacccca tccgatcagg agacgccagc gatacccgcc gcagacgaac
    13261 aacccgccga atccgatgtg ccggaaaagg acaatgacct tcaggaacgc ggccttacgc
    13321 ttaacgttag cgagttgaat gccgcaagtt ggtatcaaca cgtcaccttt acgctgacca
    13381 acctctacgc ccaggcggta gatctcaatc agcttcaact gaattttacg gccagcgcgc
    13441 accccgatcc ctacagtccg tttcagggaa caatgctggg gaatcaggcc gtgacgctgg
    13501 ccagcgatgg gggatggccc atcgagaaga ataccatcac cattaatcat gacggcgcgc
    13561 tgatgctggc ggcaggggat atcgccgaat tacagtgcta tctggccgcc acgcagacgc
    13621 cagttgccat cagcgatttg aacgcgacgt tggcccatga ccctgcccac cagggaaaaa
    13681 tttgcgttca ctttcctgcc atgacgcaga ccgtggcgct caaaccggtg attgagctac
    13741 tgtttcctgc cggcgaaacc cggcgctttg tcggtgagtg gggagaggtt ctgacaataa
    13801 gcgatcttag cgcaggaacg tatcggctta tcgtaccggt actggcgaat gatgagatgc
    13861 aaatcgcgcc agtcgagtcc tcttttaccg ttacgctgca atccggagat gccgccgcgc
    13921 aggtctaggt atcttgttta ccgattgtcc attatgccag cgcgcgtctg atgattgatg
    13981 cccctgcgct tggtaatgcg aaattgaccg ttgaaatcgc cgatgctacg caagcggatg
    14041 agcgtaccgt cacgcttatc gccaaccaac cgcagttaat cacccggcta ctggcggggc
    14101 atcattatac ggtcaatctg cagcctgcga tgattaataa ccgctttata tcggcaccca
    14161 tacagcttac gggttttatc cctgctgcgg cgcaggttgc cgaggttgct gtcgcttacc
    14221 aacagtcggc gctcgacacg gcgagcttcg tgacggtaga tgccactata ctgggcctgc
    14281 ccgatggcgt cgcgccgcag cgttatctgt tcagcagcgg taaatatcaa tactcattaa
    14341 tgctggagag cggcagcgat cggcagacgc tgtcattacg ctttgcgccc gggctgtatg
    14401 atgttcagac ggacgatatt ttcatcgaca gtgtgccgtg gcgttgtgaa caggccgggc
    14461 cgctacgctt gttgcaaaag gtcaaccatg tggcgctgga gtttctgccc ggcgtgacgc
    14521 tacaggtaaa aggttggcct gattaccttg ctcatggcgg cgtgacggtt aacgcgccag
    14581 agacggtttc tctttatcgc gatataccgt ttagcgcgtt gtttaaatac gacggttttg
    14641 acggcggcgg cgatccggtg ccggccgcag aggttgacgt gaacggggat gtttttctgg
    14701 attacgcgac attaccgatc cataaaaccg ttgcgctggt gcgccagatc gaaaaagaag
    14761 ccgggcgtag cgtcatgccg gtaatggtca tttataccgc gaatgccagc ggcggcagcg
    14821 cgctggtgga tttacaggat gcgcaaaagc tacgtaacca ttttggtaac tttattaccc
    14881 agtgtctggc ggcgcagtca tacaaagatg agacgcatcc tgtcccggcc acctttgtgc
    14941 ttaacccgga ttttctgggt gcgctacagc aaggaccgta tggctatacc gtagtacggc
    15001 aaaaaaacag tgtgccggtg aatgcccaac tggcggcggc gatacaagca ttaccggcga
    15061 tggctggctt tatcgcgcct tcgttgccga cgtttagcga cgatctctac ggttatattc
    15121 aggcggtgaa ctatcttgtt cgtcagtttg ccccggatgt ggcttttggc tggcagacga
    15181 atgtctgggc gacaggaacg gcggactggg tgctgcgcga taccgctgat ccggtagctg
    15241 aagggcaggc gatcgccgga tttattcatg aactgggcgt ttatagcgga gaatatgcgc
    15301 cggactttat tgcgtttgat gaatttgagc gtgactgttt cagtcctgat gcgcttgccc
    15361 actatggctg gaatgcgaca tgctggctta attacctggc gatggtaaaa caggtgacga
    15421 aagcgctgct gacgcccgcc atgctgtggc aaattcctgg cggccatatg cctacagtag
    15481 aagagggcgt cagcaaaatc agcgctgcgc actttgcatc cggcggaacc ttttttatgg
    15541 gtgacgcccg cattggcagc gatcctgaca cgctctcttt gcagctactc aatacggcct
    15601 taaatagcgc gacttacggc gtcccgaccg tcggcgactt tttacgtaaa gataaagggt
    15661 atgactgggg ccagatgcag gcgctgaacc taccggactt taacgtcttt tcgatcttat
    15721 ggggcggtgg ttctactatc agtattacga caatccattc taacggtgaa gacggcggct
    15781 ggctggcgga taaaatggta gagtattatg ctgctccacg ctattttaga taatatcact
    15841 gcttatttgc attaatctgg cctattagtt tgagattcga aggcgcgttc tttcgaatct
    15901 cttttcctgc gccccctgac ctctcattct ttatgcgtaa ttcgttatta attttctgta
    15961 atcaatttgt attaagaatc gtcttaatct taaaaatatt gcgtattagt gcgttgtgaa
    16021 tacagaaata ctgcatagcg atgttattta ttattaattt aagtactttt tgagaggtta
    16081 tactgtggcg ctacattgag tagacaaccg ttaatgaaaa aaatgatgaa cgacgctttt
    16141 gctaaagata ataatgagaa tttattacac tcttttcttt tttctcagca ggctaaacct
    16201 cacgcggcga ttgatgcctt attttcggcc ttgttgccat ttggtcaacc gtttacgctg
    16261 ggtatcggcg atgagtttta tttacaggcc aatgatgaac actacattgt attactggag
    16321 tcaggaattg tttctttctg tcgtgatgac aaccgactcc atatatcttc atcgtttgcg
    16381 ccatcggtcg tgggtatggt tgacagctat ggcgctacct ataacgttcc cgcgcgcccg
    16441 gaacactttt tgctcgcaga aacggtttgt agcggtagat ttgttcgcct gccggatttt
    16501 ataaaaatcg ccgatgaatg cgatttgtgg cacgacgtgg cccgttgtct ggcttaccgt
    16561 ctgatggtga tgagcgcgcg cgatcgtgaa ttagtcggcg tcgattctta cctgaaagtt
    16621 cgggcgctgc tgattgaaat ctgggcttat ccacaggcct accgggaaaa cattatcgta
    16681 ttgaatttta ttcaacggcg taccgggata tcgcgcagtc ggactatgaa gattctgtct
    16741 gaactaaaaa aaggcgggta tatccatatt gataatgggc ggctgacggc actcggaaaa
    16801 ctgccagtgg cgtattaatg cactatacgc aacgatatat ttacatatct caactgaatt
    16861 tgcctgttat cgttaataaa atgttttatt gaaaattgtt aagaagatta tttttaaaaa
    16921 gtcaatatga ctaaaggaga taggccgaac ggctggtgta aagtcaatat aaaacaacat
    16981 gttacatcta gtcctttaaa accaaatgtc gatgattgca acttgccgtt ggcttgctaa
    17041 taattaataa catcgttatc tcattataac gtaaagatta actcacgacg ttgagtagct
    17101 gttttattgc ctctgacatt tatatcagaa caagaagaca cttttttcgc ataagaaaag
    17161 tcgtgatatt gctgtgaaga aatatcagca gccgtttcgt taaaaaatct gattaccctc
    17221 atttttatat ttaaaaggag cttgaatgaa aaagcctgta ctagcattaa tggtctctgc
    17281 cattgccttt ggcggaatgt tgtccaccgc gcaagcggat actacaaccg tcactggcgg
    17341 tacggtaaat tttgtcggac aggtcgttga cgccgcctgt tctgtttccg ctgactctgt
    17401 cgatcagacc gtgacattag gccaggttcg cgccagtaaa ttaaccgagg ccggtatggc
    17461 ggcgaatcaa aaagaagatt tcaccattaa actggaagac tgcgatactc agaccagcca
    17521 gaatgcggcg gtgattttta atggccagca ggacgcaaac cagccgggtt cgctggcgaa
    17581 taccgctggg gcaggttcgg cgacgaatgt ggcactacaa ctttatggac cggatggcca
    17641 ggcgctgaat attggtgaat cgtccagtac tgttaccttg aacgatggcg aaaacgttat
    17701 tccgcttagc gtggattata tcgctaccgg tacggcgact gccggtaatg ttaccgcgac
    17761 ggcgacattt agcatggttt attcctgatt ccttatcggg atttttttct cgtctgttgg
    17821 gaggcgagaa aggggcgtta cgcgcgtcac tgcgcgtaac aaaccgacgg catcaggata
    17881 ttacgcagat gaaaaaaaac gtaccgattt tccttcgatt attgctactg ctgtcggcgg
    17941 ccggcctgtc gtttgccgtg caggcgggag gcattgcgct gggcgcgacc agggtgattt
    18001 atccgcaggg aagtaagcaa acctccttgc cgattattaa ttcttctgcc agcaatgttt
    18061 ttttaattca gtcgtgggtc gccaatgccg atggttcacg ctcgacggat tttatcatta
    18121 cgccgcctct ctttgtgatc cagcctaaaa aagaaaatat attacgtatt atgtatgtcg
    18181 ggccgtcatt accgaccgat cgcgaaagcg tgttttattt aaacagtaaa gtgataccct
    18241 ctgtcgataa aaataaactg accggcaact ccctgcaaat tgcgacgcaa agcgtgatta
    18301 agctatttat ccgcccgaaa aatctggcgg aggcgccagc ccatgccccg gcaacgcttc
    18361 gctgccgtaa cgagcgcggc cagctaacga ttactaaccc ttcgccgtac tacgtttcga
    18421 tggttgaact gtacagcgcg gggaaaaaac tgccgaatac tatggtaccg ccgaaaggcg
    18481 cgatcactct cccggcgacg cctggccagg tatctttgcg cacggtaaac gattttggcg
    18541 caacgacgcc agcacgcgtt tgtccagctt catgatgtta tgcgtaatca gcttttcatg
    18601 acgcgatatt actccagcgt agctaaaccc gtattaactc cgctggcgtt ggctatcgca
    18661 ctggcgcctg cgcctgggtg ggcggaaaac tatttcaacc cggcatttct gtctgacgac
    18721 ccgtctgcgg tggccgactt atcgaccttt tcccgtaatg cccaggcggc gggaatgtat
    18781 cgcgttgacg tttacctgaa caatacgttt ctcgcgacca gagacattgc cttccaggcg
    18841 gtgaagacga cgggaaaaag cgcgcccacc gatgacagcg gattacgcgc ctgcctgacg
    18901 cctgaaatgc ttaaaaatat gggggtaaac accggggcat ttccactgtt ggcgaaggcg
    18961 gcggcgggaa gttgtccgga tctcgccagt gcgataccgg ccgcccggac ccgctttgat
    19021 tttgcgcagc aacgtctcga cattagcatc ccgcaggcgg cgatggttgc cagcgccaga
    19081 ggctatatcc caccgcaata ctgggatgaa ggtattaacg cgttgctatt gaattacacc
    19141 tttaccggcg cgaatagtca ggatcggagc ccaggcggca gtgcggagaa cagctatttt
    19201 cttggattga atagcggcct taatctgggg gcctggcggt tacgcgacta ctccacatgg
    19261 aacgcgaata gcggcgatca gaatagcgac agcgactggc agcacatcag tacttatctg
    19321 gaacgtgatg tggtcttttt gcagggagaa ctgacggcag gcgatagtta taccccctcc
    19381 gcattattcg atagccttcc ttttcgcggg ctacaactgg cgtctgacga caatatgttg
    19441 ccagacagca tgaagggctt cgcgccgacc attcacggca ttgccagaag caacgtgtaa
    19501 gtgaccattc ggcaaaacgg ctacatcatc aatcagcgct atgtgccgcc cggggcattt
    19561 actattaatg atctctatcc taccgccgcc agcggcgatt tgactgtgga agtcaaagag
    19621 tccgacggtt ctattaatcg ctataacgtg ccctattccg ccgtgccgat tctacaacga
    19681 gaagggcggc tgaagtatgc ggcgacggtg gcggagtatc gtagcgatag tagtcaaaaa
    19741 gagaaggtga aattcagtca ggcgaccttg atatgggggt taccgcatgg ttttacgctg
    19801 tatggcggaa cacaactttc cagtcattat cacgcgctgg cgatcggcag cggcgcaaat
    19861 ctgggcgact ggggcgcggt gtcgctggat gtcacccagg ctaccagtac gctggcggat
    19921 aataactcct accaggggca atcgctgcgt ttcctgtatg ccaaatcgct tgcacagtca
    19981 ggaaccaatt tacagcttat gggctatcgc tattcaacct cgggctttta cacgttggat
    20041 gataccacgt ggaaacggat gagcggctat gacgatgaca atcggactga cagcgataaa
    20101 agcaggccgg aatgggcgga ttattacaat ctttattata ccaggagggg caaagtacaa
    20161 ctcgatatca atcaacagct aggcgggttg ggatcgcttt ttattaccgg cagtcagcaa
    20221 agttactggc acactgatga aaaggattct ttgttgcagg tgggatacag cgatacgctg
    20281 gcgggtattg catggagcgt ttcttacaac aataacaaat ccgcaggcga tgcggagcgc
    20341 gatcaaattt tcgccctgaa tatctcggtg ccgctaagtc aatggctgca acatgatgat
    20401 gaggtcacgc accatcacaa tgtttacgct acctttagca ccagtacgga caaacagcat
    20461 aacgttacgc agaatgcggg ccttagcggc acactactgg acgaaaacaa tcttagttac
    20521 aacatacagt aaggctatca gaatcacggt attggcgaaa gcggcgccgc cagcctggaa
    20581 tacgatgggg cgaaaggcaa cgccaatatt ggctataacg ttagcgataa cggcgattac
    20641 cagcaggtga attatggcct gagcggcggc ctggtggcgc acgcgcatgg agtgacgcta
    20701 agccagccgt taggcaatac caatattttg attgccgcgc cgggcgcagc caatgtcggc
    20761 gttgtcgacc agccgggtat tcatacggac gcgcgtggct atgcggtggt gccgtatgcg
    20821 acgacatatc gccaaaaccg tatggcgctg gacgttaacg ccatggctga tgatgtcgat
    20881 attgatgacg cggtgactcg cgttgtgccg accgaaggcg cgctggttct ggcccgcttt
    20941 aaagcgcgag tcggcgtgcg tgccctggta acgctgaatc ataatggtaa gcctgtaccc
    21001 tttggcgcaa cggtgacggt gaatgatcgc catgcggagg cgattgttga cgaggccggg
    21061 gaggtctatc tttccgggtt gtcagcgcaa ggcgttctgc acgttcgctg ggggaacctg
    21121 ccggatcaac agtgcgtcgc gtcctatcat ctctcttcct cccgtcagat tctgagtcga
    21181 caatatgcgg agtgtcatta aatgaaaata cctcttttat ttgctctgct ggcggggagt
    21241 gtcgtatcgc agtacgcaca cgcagacgtg tgtaaaaacg ttaacggcgt gccttccagt
    21301 attaattacg atttaacgac cactctgacg gcagaacaaa accaggtggg aaagacggtt
    21361 caactggaaa aaagccagga agttaatgta caggcggtgt gtcccgccgg cgcgtcgacc
    21421 tatagccaga cttatcgctc ctatgtgtcg ccatatccgg tcgtagaaac gagcggtaac
    21481 tggaaatatt taaagctgga cccggactac cttgaaggcg gaatgcgaat tgaggattct
    21541 tcggcgggcg atatctatcc gccaatgaac aatgtcctga tgggatatga tgaaaatgtg
    21601 aaagcgggtc aaccgtttta cgttcgtgac tcaaatctgg agtttcagct caaaattgtt
    21661 aaaccgttcg tcggcacggt gaatattagt cctaagacta tgttcaatgt ttatgtcatg
    21721 accgccgcag gcgatccgct gacagatgtc gtgtacagca ttctttatag tggaacggtg
    21781 accgtaccgc aaagctgcga aatcaacgcc ggacaaacga ttctggtgaa tttcggtgca
    21841 ttatacagcg gcaatttcaa ccatgcaggc caaaagccgg agggggtacg agcgaaaaaa
    21901 ttcagcgtac cggtaaagtg cagcggtctg gattcgcagg tcaatttaac gatgcgtctt
    21961 atcgctacgc cggatagcca ctttccccag gctatcgctt cggataatgc cgatgtcggt
    22021 gtagtggtcg aaaccgatga aggaaacgcg cttattccca atgatgtaca gagcgtcgcg
    22081 ccttttatca ccgatagcgc cggacgcgct aacatcacat tgcaagccta cccggtgagt
    22141 acaacaggtg aaacgccagc ggaaggggcg tttaccgccc tggccagcct gcgagtggac
    22201 tttgactaaa tgaacagatc acactgcgct ctttttgtca tgggactaat cctgtgtcca
    22261 caaatcaatg ccagcgctga cgacctcgct tataacctcg aatttaccgg cactattgtg
    22321 gcgcaaactt gcgacataga tatttccagt ctcagtcaaa gtattgattt agggcagttt
    22381 gcagttggcg attttccttc gacaggaaca acgacaaaat ttaagccctt taatatcaac
    22441 ctcaaaaatt gttcccgagg aattaccggg gcgaagatct ggtttaccgg cgaacccgat
    22501 ccggacaatc ccgcgctact ggcaataacc gataccggaa tgggaagcgg aaacatgtta
    22561 gcaagcgggg taggggtgga aattctgaat gatgatcagg ataccatcag tatcaataat
    22621 gccgactcag tggtctatcc gttgaaagcc ggacgcaaca cgctgtcttt ttatattcgc
    22681 tataaatcga cccggccgac ggtcacgtcc gggaacgcga cggcggtcat gtatttcgat
    22741 atgcagtatg aatgaggagc catcgtaatt atgcgtaacg atatcctgta cggcatcggg
    22801 atgctgctgg cggcatccgg cgtccaggcg cacgatggcc gggtctatgt ctccggaacc
    22861 atcacggaca atacgtgttc gctctctcca ggctcggaaa atattaacgt ggcgatgggc
    22921 gcggtttctc aacggcagtt ttatcgcgcg ggcgacggtt ccgcctggca accttttgct
    22981 atcgatttac agaactgcgg tagcactgcc agcggcgtaa cggtcagttt tagcggtgca
    23041 ggggatagcc gtaatacgga tttattggcg cttaccgcag gggaaagcga cgcttcagga
    23101 attgggattg cgctttatga tcaaaataaa actttaatcc cactggggca ggagagtgat
    23161 gtggtgacgc tcagtccggg ccaggcgtcg gcgcatctgc aattttacgc gcgttatctt
    23221 gccgatggcg gcacggtaac gcccggggac gccaatgcct ccgcaacctt cattcttgcc
    23281 tatgaataag ttctttttac actgcgcgat atattggtgc ttgcttccca tatcatgggc
    23341 gcaggctggc gtggtaattg gcggtactcg ctttatctat catgcgggcg ccccggcatt
    23401 aagcgtaccg gtaagtaacc attcagaagc gtcctggtta attgatacgc atattttacc
    23461 tggtggccgc tggcctggaa ccaaaaacga agggaatatt acgcccttcg tggtcacgcc
    23521 gccattattt atgctttcag cgcgccagga aaactcaatg cgggtggttt ataccggcgg
    23581 accgctaccc gccgacaggg aaagtctgtt taccttgagt atcgccgcta ttccctccgg
    23641 taaaccggaa gcgaaccgtg tacaaatggc gtttcgttcg gctttaaaat tgctctatcg
    23701 ccctgaggga ctcgccggca atccgcagca ggcctaccgg catctgatct ggtcgcttac
    23761 ccccgatggc gcgacggtac gcaatccgac accctattac gttacgctct ttttattacg
    23821 cgctaacgag cgcgcccagg acaacgccgg ggtcgtggct ccctttgcaa cgcgtcaaac
    23881 ggactggtgc cggcacgcgg ttcgctgcac tgtgcgctgg caaagtatta atgactatgg
    23941 gcgggtaatg acagcgcaaa ccgtggatct gacgcgtatt cattaaccta tttttcaggc
    24001 gtctcccgat agcgggaggc tttccgatct tatcgaacga gacttttatt atgtattatc
    24061 acgcgttaaa actttcccga ctggcgatgt tgacgttggc aggcgttgca gtatccgcct
    24121 cggcaatcgc cgccgattct gccccgacgt cgcaaattgg cccgacggcg gaagcctaca
    24181 tcgtcagtca tccggataaa gtgggagagg tggtggcaac gtatttggcc gaacatccgg
    24241 aatttttggt cgccgccagc gagacgttac atcagcgtca gcagattgcg caacaacagg
    24301 cgtatgttca actggcatta cagtatcgtg ctgagttgct cagtagcagc agtccttccg
    24361 ttgggcccag cgaggcaaaa gcggcggtgg taatgttctt tgattaccag tgctcgtggt
    24421 gcagcaaaat ggcgcctgtg gtcgaaaacc tgattaaggc gaacccggat actcggttta
    24481 ttttcaaaga gtttcctatt ttttcctccc gctggccggt atccggactg gcggcaagag
    24541 tcggcgaaca ggtatggctt acacagggcg gggcgaaata tctcgactgg cataatgcgc
    24601 tttatgccac agggaaggtg gaaggcgcgt taacggaaca cgatgtctac accctggcgc
    24661 aacattatct aacgccgacg cagctggccg ccgtaaaaga agcgcaaagc agcggtgcag
    24721 tacatgatgc gctcctcact aaccaggcac tggcgcagca tatggacttt agcggcacgc
    24781 ctgcttttgt cgtcatgcct cagacgcaaa acggtgatgt aaaacgggtg accgtgatcc
    24841 cgggaagcac gactcaggat atgttgcaaa tggcgattca gaaagcgaag gggtgatatt
    24901 cgctcagagg agaacgcaca ggagtgaaag taaaatgaag tctatgcgtt gcgtcatacc
    24961 ggtgatttta ctttccttta tcgttcatga agggacagcg aaaccgaccg ctcagattca
    25021 ttttatggga tcggttgttg aggcaggctg ctggaatgac gtgggaacct tagaaattca
    25081 atgctataat aaagagggag ttgaacgtta tattattgtc gagaatatta tcacgccgat
    25141 atcgtctcct catgcaacgg taaaacgaga ttatttggat gaagataagc aattaacagt
    25201 gctacgcatt gtctatgact gaaccgcgta gcagaccgca ggtggtgtcc cgtcagtgtc
    25261 gtgtgaggat attatgaaaa atgttctcac cttcccggga cacggtctac agactttatc
    25321 ttcagataaa cggcgctaaa aagaaaagta cgatcaataa aaaaagagtg ggaataccaa
    25381 tagatataat tttattacat cggtgagtat gatattgaat agcttgtggc ggtatgtcag
    25441 cagcgtcaat gataaatctt tcatcgattt ttatcccctg cctggggagc gtaacgaaca
    25501 gttcgaaaag cccgatttgt tgtaaatctc gtcgtagcag ataaagaagt tgcgtcaaat
    25561 tagcatcgct aacaaattga cttcgctctc cccaaactgc gtgtgaaatc atctcccgcg
    25621 taatcagttt cttgtaggca ttttcaaaaa gatagcttaa acaacgcgca cgcattagcg
    25681 tcacctttag cactttttta tcatgtaatg atattatttc tcttaacgac tcattataaa
    25741 taaattcgtt attaatagta tattgtctca tgaattcact ccgttttgat attcataagg
    25801 tacgtttcac actgtcagtg tgttcactgg cggtaaagta ctccttacat cagtacggat
    25861 aagtgtagag aaccgcaaag aaataagaga atcatttgtg attaaacggg ataatattat
    25921 gcttttttac ttttttataa aatgtgccag atgtttttga tgttttttat aaaatagcat
    25981 catgtgtttt tattttacac aggctgaaat gatatcaata aaattataat ttaataacaa
    26041 acagatagag gaaatgattt acttattgaa ataagtgtgg tgcaaggtta atctgcgcct
    26101 taaatgatgg tgccagatta taccagccag gataacctat atgcggccaa taaaaaatgc
    26161 taaaaaaatt gactacaatc tgatcaaagt gttcgatacg gttattactg aaggaaatgc
    26221 aaccagggct gcgaggaaac tggatgtcac gcctgcggcg atctctcagg ctcttcttcg
    26281 tttacaaaat ctttatggcg aagagttatt tatcagaacc cgcaaaggat tagtcccgtc
    26341 cagcaaaggt aaatcgcttc accaggtatt tcgccaggca attgaatcta tagaaagcac
    26401 actgtgcgat aaaacagatg cgcaggagag taatgaactc attgttctgg gaagtgatat
    26461 cactgaaaat tactattttc cggcattgct ggatactgtg ttgatgaatc gatatattat
    26521 taaacactat gcgattaaaa aaacagggga atactcgcca gcctccatgc tgacgcatgg
    26581 ctatgcggat atcatcatgg gaattctgga aattaagaat gagatgatcg aaagttttct
    26641 tattgataat ttatctgatt ttgtttgtgt ttgtggtgaa aaaagtccat tggttgggct
    26701 tgaaaaaatg tctttatata atttttatgc tgccagacat gctgtctatc attcagatat
    26761 gttctcttct ttcaatgctg atagcattga tttattcaag agcagtacgc cttatgcggg
    26821 gcgcagggaa ataggttatt atagtgattc actatttggc gttatcggtg ttgttgaaaa
    26881 aagcgatatg gttgcgattt tgccaggaaa aattgctact tattttagag atgtgcggcg
    26941 ttataatata aaaatactac gtatgcctga tgaaataatt tttcgtacat tacccgttta
    27001 tgcttatctg gctacaaata gcacccatta taaaaatgcc aaaaaactga tatcaacatt
    27061 tcagtcgacc tttcttttta gccaggaaaa acagcctgac gctttggttg aaggaagcac
    27121 atccttatgc gattgatctg tttaatatca aattactgta ttaaataaat aaccattatg
    27181 accatggtca gtaaagcaaa aaataatgct atatatttat ccccttcttt ttttaaagaa
    27241 gaggggaggt ttttgttttc attgctgata ataatgttgg catctacttt aatacccgtt
    27301 cgaggcaccg tggaaaaaac tggctcaagc caaagccttt aaggtcgcgc cgcagtagat
    27361 ataaaatctg ggtcaggttg gcgtcgctga taaattgact tctttccccc caaagttcat
    27421 tagtgagttg ttttttataa ataatctctt gttgtgcatg attcagcata tattccagac
    27481 actttatgcg cattgcggca atttttatta tctttcccgt ttttatgttt tttagctcat
    27541 tggtcttatc attgtaagtg tgcgtgctgt taattaaata aatagtcatg atgttattta
    27601 atgggtttaa ttggggtagc gataataata tgcatattaa atttgtggat caactggcgt
    27661 gattgtaata gcgtcttttt tccagagaaa atcgtatcgt gtcacaaaaa tgatggtttt
    27721 ttagaaaaac taaaatttta tttttagtcg ttctaaaaat aaaatgatag tagtgttaat
    27781 ttttatcagt agattgatat gctttgattg atttattgtt gacataaaat aatttgaatt
    27841 atggcgcaag gcctatgcca accataaaaa aggtataggc tattagtcac aatgcattaa
    27901 tgctacataa ttgttatgct tttatattag cgccagggaa ataaaatctt cggacaataa
    27961 agaatagttt tagtctgggt gttattttat ggatatttta ttttaaatta ttaaaccgat
    28021 ttctcttgtt gacgtagggt tatttgctaa gcaacgggct ggcttgttgt ggccgctcgt
    28081 tgtctatatc tgaattaata aggaaaaacg tatgaataag aaaaattcgt caatggttaa
    28141 cttgcccgca ccgcgtgagt cgattaacca gaaaatcgat accaataacg cattggtgtt
    28201 aaatcataac gccatatatg aacaacgatt agcggagatc acgcaatcta atacctgtga
    28261 caaggccatt gtcaccgtaa atccctacgg gaccgccccg ttgagtctct atctgggaat
    28321 ttggattgat gaagctgccg cgcttgagat caatgttgtt gatagcgaag cgacgacaga
    28381 ggcagtgcgt tatcaatatg atgtacatcc gggcgctaac cttattcctg tgtgtgggat
    28441 ggtatccgcg gtgaataatc agattaccct acgccttgcc tcgcaaattg tcgggcaata
    28501 tacagtaatg actgacgcat taccgcccac ggattcggct aacgtgagcc tcggcttccc
    28561 cattattagc gtctcctgtc ctgcgcagca ggcctcgctg atggaggaag ggctttattt
    28621 ctctacttat tttgatcggt ataatctggc ttttgatcat aacgggattg tccggtggta
    28681 tgtaagtcag gaaatccctt cttataattt tgtcagaatg gataacggcc atttcctggc
    28741 gacgtcacag ggaataaacc attgtctgaa tatgtatgaa tttgacatta tgggacgggt
    28801 ttatacggtt tatcttctcg acaatgagtt ccatcactcc attcttccca ttgagaacaa
    28861 tctggcgatt gcgccttcag aatatagcaa tggacggcca gatggttact caaccgggaa
    28921 agatggcgtt tctattatta acttatctac cggacttgaa gtcgcctatt acgatatgct
    28981 gtatgtgatg gattattcca gatcgccgcg tccttccgga agcgcgccag gtcaggacgt
    29041 atcaatggat gactggctgc atatcaacca aagctatatt aatgaaccca acaatttgct
    29101 gatctgttcc ggtcgacatc agagcgcgat ttttggcgta aatgtggatt ccggcgaact
    29161 gcgctttatt atggcgaacc atgaggattg gtctgacgaa ttcaagcaat acttattaac
    29221 tcctgtcgat gatgatggcg tcccgctgta tgatcttacc tcgccgggag ggattgatgc
    29281 ggcagataag aatttctgga cctgggggca gcataacatt gttgaaattc caaatgatga
    29341 gcctggtatt ctggagttta tggtctttga taatggtaac tatcgttcac gcgaagatgc
    29401 gaaaagtttg ttgccgctcg ataacttcag ccgggtggtg cagtttaaaa taaacctaaa
    29461 cacgatgacc gtaacgcgtc cgtatgaata tggtaaaacg gaagtcggga accggggcta
    29521 tagcagtttt gtgagcgcta agcatttatt gactaatggt cacctggtta ttcacttcgg
    29581 cgcgacgacg gttgatgagt ttgaacatac cattaccgcg caaccaggct ccagcgatct
    29641 tgtcgatccg gatgaagggc aacaggcgtt aggtcgactg gtattacaag aaatcaataa
    29701 agagacgaaa gaggtcttat tcgaagcgat ggtgacgtcg ggctatttca agaacgaaga
    29761 gacgaatggc acgaattatc gttatgatat ttctgcattt cgggtataca aaatgccgct
    29821 gtttgcataa ctaagtatgt tatgcggccg gttatcgacc gcataacatt atggcttatt
    29881 tgctaatatc atccacgcgc atggtgtggt caggttgaat attgttaacc tgcttcatat
    29941 agttaaccaa cgccggtgcg gtttgtatcc ctatatattt gatattttta cctttagtga
    30001 aggtaaatcc gccaccacct ttaccgataa aggaatccag cgcgacggta tagagtttat
    30061 tgtcttctac cggtttgcct ttgatatcaa attcaacaat acgctggccc agcggtttgg
    30121 tactgtcata tttaaactgg acggttttag atacgtgcag cataccgttt ttcagatcgg
    30181 cagcgtgtga catgatggat ttcaggtcct taccgctgat ttccatgctc atgacatcgt
    30241 tggtgaacgg atacatactc agcacatcac cataggtgat attaccttta ggcaattcgg
    30301 tacggatgcc gccagcatta tagaaggaag cgtcggcgcc aggaacggta gccatcaggg
    30361 catcggtgat taagttgccg gttggcgcgg attcaccgta agaacgggtc agcacttccg
    30421 gagagtgcgc gaccacttca tcggtaattt tcttaacctt gttatcccat tcgtcaattt
    30481 tggcctgcgt gaccggatct ggcttataag tatccgcata catggtgatc aacttaccat
    30541 tgtagctgtc cacttttttg gtttccgggt tccagtcaag caccagttta cctaattcga
    30601 tggtgtacgc atccgtggaa acgacaagag tatcgcccac tttaatcggt tctggcgtac
    30661 ctttatgcgc atggccggta atcaggacgt taagtccata gccttccagc gatttcgcca
    30721 tatcaacgtc ggttttcagt gcgcgtgcga catcagcctc gcccgcgctg gactgcatac
    30781 ccggcacgcc ttcgtgggcg agcagcacgg tcaggtcaac tttccctttt aactcttcca
    30841 gctgtttttt cacataagga atcggatcgc ggcagtcaac gccttcacgc acgcctgcgg
    30901 caatcgcttc atagaatgcg gaaacgccgt gcataccgat gacgccgatc ttgaatccat
    30961 ctttttccac aatggtatac ggttctttaa ttaatggcgt atctgtgccg ctgtaaaaaa
    31021 cattatccaa caataccggg aattgcaatt tgctgagctg tttaaccaga ttctcatggc
    31081 catggtcaaa ttcatggtta ccgacagaga cggcgtcgta aggcatggta tttaaaatat
    31141 caataatagc ctcgcctttg gtcagcgtac tgataaaagg tccggtgaaa tagtcgccag
    31201 catcaaagaa aaagacatct ttctctttcg cttttgcatc tttgacaatt ttcgagatgg
    31261 gcgcaaagcc gcctaccgga cgtgtcttgg atacataggg gataatttct ggggttacat
    31321 gggcatgtaa atcgttcgta taataaattg tgatgtcacg cgcatcggct gaaaaggaaa
    31381 tggctgaaga caaaccaatg cacagcgaca gtagggatat cgaaaacttt ttgttcatat
    31441 aaaccatcca tttacgctac attaaagaaa aacaatgcct gtagtcgtgt cattcacgac
    31501 tacaaaccgg ggaaattaag taatattcat caagtttatt aattattaaa acttgaagcc
    31561 gatcaggtaa ttcatacggt cgccgtagcc gttatacccc aatttattat tgaagtaacg
    31621 gtaagagacg gaggcggtcc atcgcggcat aaatttccat gtaaacgtta ccgcgccgtt
    31681 caggccggtc gtcccaccct gttgttcggc gtaggcatca ttacgatcca tttcaacttc
    31741 gttccagttt gaaatgacga acttttcatt aaacatatcg aagttataag ccgcgaccca
    31801 accgagaaca taaccgttaa agcctgtcgc ctgtccatac tttttagagg tataatcgtt
    31861 cgataagtta tgaacagcga aatagggctt aataaagcct gatgggctgg ttaaacccag
    31921 ataacctacc ccgtacatca tgtttaattc atcaccgaat ttattctcca tcgacatata
    31981 gagtttcatc attgcggtaa agttagagcc ttctactacc ctataatgtc ccagaaattg
    32041 ggtaacatgg ttacggcctt ctaccggatg gttgagcacg ttcatttcat aaaatgatgc
    32101 aaattcgccc ctgtcaaaca cggcgccgaa atcggctacc gctttccaca cttcgccgcg
    32161 atcgacattg acaaagcctt tattccagtc gccatatccg aagctaagtt taccgtatac
    32221 gcgtttcaat tccgctgcct ggccattaaa gcaagagaaa agaacacatg cggcgagtag
    32281 actattaata tatttcttat ttttcatgct caactccatg aggtaaaaac acagtgaaat
    32341 gttgtgtaaa gaagcgaatt ctaaggagtg tctttttata cgtaggtgat agatgtctca
    32401 aaaatatcag cgacatataa tcgtcaaata ttcgtgtcag ataatgttgt ttattacgtg
    32461 ataactattt gatttatagt ttatgtctct gttgtaaaag tcacaccgga tagcatgaaa
    32521 ttaatgaaac ttcgaatggg aataatctct cgcaaagaca acttactgcc attaaatgag
    32581 ggtgttaccg ttcaaacagc aacatatatt gacatcacaa tagcggttct gacatatggg
    32641 ccatatttga gatctgcatc actcgttcgc gatttctttt tttatagact gcttcaggcg
    32701 tgttttcttt agcacgaaat atatttatgg tattaatatt ataatgagtg tgaataattt
    32761 ctacgataaa acgatgttaa tggaagaaat ataagataaa tcgaatatat atagtgcaat
    32821 taatttaggc tgtattccgc agccgggtct atcggcaaat atatcgtaat cagaccgtgc
    32881 gataactcaa aggagttgaa atgaaaagaa cagtcgttgc cagtatgata gagttggcgc
    32941 tatgcgctgg atgcgtatta tcaaccgcgc aagcggcaac cgcaaagcgt cctaacttag
    33001 tcattattct ggcggatgat ttagggtatg gcgatctcgc cacctacggg caccgcatcg
    33061 ttaaaacacc taacatagac aaattggcgc aggagggggt gaagtttacc gactattatg
    33121 cgccagcgcc tctgtgttct ccttcccgcg cgggcctgtt aaccggtcgt atgccgttcc
    33181 gtaccggaat ccgttcctgg ataccggaag gcaaagatgt tgcgctgggg cgtaatgaac
    33241 tgactatcgc caatctgcta aaacagcagg gctacgatac ggcgatgatg gggaaattac
    33301 acctgaatgc gggcggcgat cgcaccgatc agccgcaggc gaaagacatg ggctttgact
    33361 atacgttggt taatccggcg ggatttgtca ccgatgctac gctggataac gccaaggagc
    33421 gcccgcgcta tggcgtggtg catcctacgg ggtggattcg taatggccaa catattggcc
    33481 gcgcagataa gatgagcggc gagtttgtga gctctgaagt ggtgaactgg ctggataata
    33541 agaaagacga taatccgttc ttcttatatg tcgcctttac cgaagtccat agcccgctgg
    33601 cgtcgccgaa aaaatacctt gatatgtatt cgcagtacat gaccgactac cagaagcagc
    33661 atccggatct gttctacggc gactgggcag acaaaccgtg gcgcggcacc ggcgaatatt
    33721 acgccaatat cagctacatg gatgagcagg tcggtaaagt gctggataaa attaaggcga
    33781 tgggcgagga agataacacc atcgtcatct ttaccagcga caacggccct gtcacgcgcg
    33841 aagcgcgtaa ggtatacgag ctgaaactgg ccggggaaac cgacggtctg cgcgggcgta
    33901 aagacaacct gtgggaaggc ggcattcgcg taccggcaat catcaaatac ggcaagcaca
    33961 ttccacaggg gatggtaacg gacacgccgg tatatggtct tgactggttg ccgacgctgg
    34021 ccaacatgat ggactttaaa ctcccgaccg atcgtaccta cgacggtcag tctttagttc
    34081 cgctcctgaa ggacaagacg ttaaaacgcc agaaaccgct gatcttcggt atcgatatgc
    34141 cgttccagga cgatccgacg gatgagtggg cgatccgcga cggcgactgg aagatgatca
    34201 tcgatcgcca gaataaacct aaatatctct ataacctgaa aaccgatcgt ttcgagacgc
    34261 tcaatcaaat tggtaaacag ccgcagattg agaaacagct ttacggtaag ttcctgaagt
    34321 ataaaaagga tattgataac gattcgctga tgaaagcccg tggcgataag ccgacgcctg
    34381 tcacctgggg ctaatggaat aattataaaa aattaagtat gccacttagg gcgatgccca
    34441 cctgatccgg tcactctgtg ccggatcagg ttcttttatt tcagggaagg taatgatgtt
    34501 tgggaaaagt tgtcaggtca tggttaaacc aaccggatcg gtgtgtaacc ttgactgtaa
    34561 gtactgtttt tatctggaga aagaaaagct ctatccggat cgaaaaaacc attacaaaat
    34621 gtcggaagag accctcgaac tcttcatcag gcagcagatt gccgcacagg atattgatga
    34681 ggtcattttt gcgtggcagg gcggggaacc cacattaatg ggcatcccgt tttatcgtaa
    34741 agccgttgaa tttcagcagc gctattgtgg cggcaaaacc atcgtcaata ccttccagac
    34801 caacggcatc ctgatcaacg atgactgggc gaccttcttc cgggagcatg attttctggt
    34861 tggcgtctct attgatggcg atgccgcgtt acacgatgaa tggcgagtga cgcgctccgg
    34921 aaagccgacg catgaaaaag tagaaaatgc ggtgcgttgt ctggcgcagc acgacgtaga
    34981 atttaatacc ctcacggtgg ttaaccgtac caatatgcat catcctgttc aggtctatcg
    35041 ctacctgaaa agcgttggta gccgctatat gcaatttatc cctttagttg aacgctgtgg
    35101 ggaaaatggg ctggcgcagc cgcaggataa acatatcgcg atgacgccgt ggtcggtcga
    35161 tagcctgcaa tttggtcagt ttctgaatgc ggtatttgat atctggatcc gtgaggatat
    35221 cggcgatatc ggcatccagc tatttgaaca gacgctggcg gcctggtgcg gcctgccgcc
    35281 gcaggtttgc gtttttgctc ccacctgcgg cagcgcgttt gcgatggaaa tgaacggcga
    35341 tgtttataac tgcgatcact tcgtatatcc gcaatttaaa ctggggaata tccaccagaa
    35401 gacgctgcgt caaatgaatc agggcgaaca aaatcgccag ttcggcagcg ataaacagcg
    35461 ttcaatggcg caggagtgtc atcgctgtca atggaagttc gcctgctatg gcggctgtcc
    35521 gaaacatcgt tttttaccct ctgcgtcagg cgcaaccaat cataactatc tgtgtgcagg
    35581 ttatcaggct tttttctcgc ataccgcgac ggcgatgagt gccatgcgaa ccctgtatga
    35641 aaaaggcatc tcacttgcag aaataaagtc aatatttgtt tgaaggtagt attcgcaggg
    35701 agtgaatatg ttttctcaca ttaatgtcga tgcttgcaaa acgccaggct gcaaaaatct
    35761 ggggattctg gggagcccag actatctacc gcaagggaaa aatgttctct gtcgagcgtg
    35821 cggttttttg ttccccatta tctcagccag atcgcttaat ctttttcgcc aggcggcgaa
    35881 tcaaccctgg aaaggtctgg tgaagtcctg tccgcattgt ggcgggacgt cgctgaaaaa
    35941 tatggatttt ccactaaagg tgaacggcgt atgtattgcc gccagtgtaa taaaacgttc
    36001 atctcctata ccgctatcag gagcgacgcc agacaagaga accttgccac gttgattggc
    36061 gaaggagcgt cgctagttga aatacgcgcg gcgctggcga tagacagcac gggttttagc
    36121 cgcgaattac aaaaactgtc ccgtcgcgct aatcaagcgg aacgcgattt tgtgtttccc
    36181 gcgtttgata tcgctatgag cacgcgggcg tttcgtgtga aatttaacgg cggcgacagc
    36241 agcttatatg tgctggtgac ggcggaagag gagagcggta aggtcgttgc gatctcaacg
    36301 aattactccg cccaaccggt ggaagcggat tatcaatatc attctgatta cgaagaacga
    36361 cttccgtccg gcacgctggc gcatctggtg cagcgaaaag aggcgctgac catgcgccgc
    36421 aatgtattat ttgatgtgga ttacggcccc gccattttat ataaaaacga tccggggatg
    36481 ttagtaaaac ccgtattacc tgcttatcga cattttgagt tggttcaggc gttgacggat
    36541 gagcgctccc tgaatgtcca gcattatctc gatcacgaat gctttattct gggcggctgt
    36601 atgatggcga attttagcta tcttcgtcag gggcgctgcc atatttcgtt tgtgcgtgaa
    36661 agaggcgtta cgccgcccaa acgcgatctc cctccgcggt tgtttttgag cggcggaatt
    36721 cgcaacaacg tctggcgtac attttccaca cgggattatg cgatggcagt atgcaatctc
    36781 acaggaaata aaaaggtgag tttgttacgt catgcgacgt taaatagcgc gacggcgttt
    36841 attcgctatg ttcacaacca tcccttcctg ccgcatctta accggatgtc tcctggcaat
    36901 gttgttgccg tactggatta cctaaaattt gaatatgacg cttcatgtaa ctgaattgct
    36961 aaaataaaaa gtgtgatgag gtgttgttgc ggtattttat tcggacggct taaaaatcca
    37021 gagtattaat tttcgtggtc cccatgaggg gcgatgagat taatacactg gagatttatc
    37081 atgaatacgt taactgcaac gtctgttgtc cttcctgcgc cgcgtccggc gattaatcag
    37141 ggtatcgata tcaataatga aatagtgctt aaccataccg ctatttatga aaattgcctt
    37201 gcgcaggtca cgcaagagaa tacggtagaa aatgcgctca tgttgttaga cccttacggc
    37261 acggcacctt taagcgccta tgccggcgtc tggagtctgg aaccggctga gatcatggtc
    37321 acggtccagg atgcggcaaa aacggcgatg ccggtagaac atctttacac ccttacggca
    37381 ggcgcaaatc tgttgccggt tctggggctg gtagcggaga ctgaaaaccg tattgtcttt
    37441 tctcaggcag atacgccgct tgccgtctat acgctcacca cacagccgtt accgccggta
    37501 gattccgcgg aggtcgtatt aggttttccg attatcaacg tgacgcaacc tgctaccgat
    37561 gtggacaaga tggcgccagg gttttatttt gttacgcatt tcgatcgcta taattacgca
    37621 ttagatcaga atggtctggt gcgctggtac gttactcagg attatccgtc ttataatttt
    37681 gttcgaattg ataatggcca tttcctcacc acttcagaag cgaaaaatac ctatctggat
    37741 atgtatgagt tcgacatgat ggggcgtctt cacacattct ataatctcga taaccaattt
    37801 caccattcta tctggccgtg ggacagtaat accattgttg cgccctctga atatacctcg
    37861 ggtcggcccg acgatttgaa aaccaatgaa gacggcgtat cggttgtcga tctggctacc
    37921 ggactggaga cggcttacta cgatatggcg aaggtgttgg atacgacgcg ggtttcccgt
    37981 ccttcaggta cggcgccggg agaagacccg acggttaaag actggctgca cataaaccag
    38041 agctacgtga atgagacgaa tcagttgtta attgcgtccg ggcgtcatca gagcgcggtg
    38101 tttggcgtcg atctgcaaac gcaagcgtta cgctttattt tgtcaacgca tgaagactgg
    38161 gacgacgctt atcagcctta tcttttaacc ccggtcgaca gtgaaggtgt ggcgctttat
    38221 gactttagca aacaggagga tatcgacgcg gccgaccgtg acttttggac gtggggccag
    38281 cataacgtcg ttgaaatcgc caataatacg ccgggtatag tggagtttat ggtatttgat
    38341 aacggtaact accgttcgcg tgatgacagc aaaagcctgt taccgccgga taactacagc
    38401 cgcattgtcc atttcgtggt gaatatgaat gagatgaccg ttatgcggcc atttgaatac
    38461 ggcaaggagc tgggcgcgcg tggctacagt agctgcgtta gcgcgaaagc gatccagcag
    38521 aatggcaata ttgtggtgca ttttgccgac tgcacgtttg atgaaaatgg ccgcgccatc
    38581 tcttgccagc ctggcgagag cgatattatc gatccgcagg cgggcagcga ggcgatgggg
    38641 ctgctaattt tacaggagat tgcgcctacg gagaaaaccg tgctttttga agcgactatg
    38701 acgtcaggtt actacaaaaa cgcggaaacg aacggggaag gctatcgcta cgatattacc
    38761 agtttccggg tgtataaaat ggatctgtac gcgtagcggt ctatcatcaa tgactgactg
    38821 cactaaaaaa gtccggcgta agtcggactt catttcgtaa aaaacgagct attcatcata
    38881 tataatctaa ttttaacgat gagtcaggcg aggtaagata gtagatccga agaattcacc
    38941 tgattgagag aataaaaagt gaaacatctg caccgatttt ttagcagcga tgcctctggg
    39001 ggcatcattc tcatcatcgc cgctgcgctg gctatgctga tggccaatat gggcgcgacc
    39061 agtggatggt atcatgattt tctggagacg ccggttcagc tacgggttgg ggcgcttgag
    39121 atcaacaaaa acatgctgtt gtggatcaac gatgcgctga tggccgtgtt tttcctgttg
    39181 attggcctgg aagttaagcg cgaactgatg caaggctcgt tagccagtct gcgccaggcc
    39241 gcttttccgg tgattgccgc catcggcggg atgattgtac cagcattgct ctatctggcc
    39301 tttaactact ccgatccggt cactcgtgag ggctgggcta ttcctgccgc gacggatatc
    39361 gcctttgcgc tgggcgtgct ggcgctgtta ggcagccggg ttccgctggc gctgaaaatt
    39421 ttcctgatgg cgctggcgat catcgatgac ctcggcgcca tcattattat cgcactgttt
    39481 tataccagcg atctttctat cgtctcgctg ggcgtggcgg cgttcgcgat tgccgtgctg
    39541 gcgctgctga acctgtgcgg cgtcaggcgg acaggggtat atattctggt cggggcagtg
    39601 ctgtggacgg cggtactgaa gtccggcgtt cacgcgacgc tggcaggcgt cattgtcggc
    39661 ttctttattc cgctgaaaga aaaacacgga cgctcgccgg ccaagcgtct ggagcatgtt
    39721 ctgcacccgt gggtcgcata cctgatcctg ccgctcttcg cttttgcgaa tgccggcgtt
    39781 tctcttcagg gcgtcacgat ggacggtctg acctccatgc tgccgttggg aattattgct
    39841 ggtctgctga ttggtaagcc gctggggatt agcctgtttt gctggctggc gctgcgtttc
    39901 aagctggcgc atctgccgca ggggaccact tatcagcaaa tcatggcggt cggcattttg
    39961 tgtggcattg gctttacgat gtccatcttt atcgccagcc tggcatttgg caatatcgat
    40021 ccggaactta ttaactgggc gaaattgggc attttgattg gttcattgct ctccgcagtg
    40081 gtggggtata gctggttgcg cgcgcgtttg aacgcgccgg cataaccagt acgaagggaa
    40141 gggggagcga tgtatcgctc ccttacgaca ttgagcaggg agagaaatga gcatgtctca
    40201 tattaactac aaccatcttt attatttctg gcatgtctat aaagaaggtt ctgtcgtggg
    40261 cgccgcagag gcgctttttc tgacgccgca aaccattact ggtcaaatta aagccctgga
    40321 agagcgttta caggggaagc tatttaaacg taagggacgc ggtcttgaac ccagcgaact
    40381 gggcgagctg gtttttcgct atgcggacaa aatgtttacg ctaagccagg agatgctgga
    40441 tatcgtcaat taccgcaaag aatcaaacct gttgtttgat gtcggcgtcg ccgatgcttt
    40501 atccaagcgt ctggtcagca gcgttctgga tgcggcggtg gtggtggacg aacccataca
    40561 tctgcgttgc ttcgagtcca cgcacgaaat gttgctcgaa cagctcagcc agcacaagct
    40621 ggatatgatt atctccgact gcccgataga ttccacgcag caggaggggc tattctcagt
    40681 caaaatcggc gaatgcagcg tcagtttctg gtgtacgaat ccgcttcctg aaaaagcgtt
    40741 tcctgcctgc ctggaagagc gacggttgct ggtgccggga cgtcgctcaa tgctggggcg
    40801 taagttgttg aactggttta attcgcaggg gttgcaggtt gagatcctcg gtgaatttga
    40861 tgacgcggcc ttaatgaagg cgtttggcgc gacgcatgat gcgatttttg tggcgccgag
    40921 cctttattcg ctggattttt atgccgatga gtcggtaata gagattgggc gcgtggagaa
    40981 tgtcatggaa gaatatcatg cgatttttgc cgagagaatg atccagcatc cggcggtgca
    41041 gcgtatttgc aatgcggact actcggcatt gtttaagcta cagtagacat acctaccgta
    41101 atacttccgg ctgcggaact aacccgcagc cggaatcatt ctacaagttc agtaggctac
    41161 ggtactgccc accttcgcgg ataaacaccg gaattctgtt cagtggcgta gcgtaatgca
    41221 gcgtctgccc tcctgaatag ctttcaccgg tcgcaagatc cgtccatgtt tccccttctg
    41281 gtagccagac atcacgttcg cgcatacctt catgcatgac gggggcgatc agcaggtcag
    41341 gaccaaaaca gtactggtcg gtgattgtcc aacttgtttc ctgttcgggg aattcaaaga
    41401 acagggggcg catcactggc gtattgtgct tatgggtttc ctccatcagc gctttgatat
    41461 agggcttgag tttttctcgc aacgctaggc aacctgtcag tacgtcgcat acttcctcac
    41521 cgtagctcca gacctcgttc ggcgcacctg tagggcactg ggcgatacca tcccgatacg
    41581 gttgcgcggg taaaatttgc ggatcgcggt tgccgtgcag acgcatcacc ggactaaaga
    41641 cgccccactg gaaccagcga atcagcaatt catggaattt cgggtcgtga atattaccgc
    41701 catggaaacc gccgatatcc gtcgtccacc acggtatccc tgctattccc atattgagtc
    41761 cggcggcaaa ctggttgcgc agcgatctaa acgaggagtg aatatcccct gaccagacca
    41821 gagcgccgta cttctgactg ccggcccagg cgcagcgtag caggttgata acctggtctt
    41881 cgccatcggc tttcatgcca tcaaaaaagg ttttagcgta catgcgtggg tagatattgc
    41941 ccacttccag taccggtccg gcatggtagc gatagttgtc gtagtcgtaa acgctgaact
    42001 caggttcggc ttcatctaac cagaatagct tcacgccttt atcgtgatag ttgcgtttgg
    42061 ctttgcccca gacatagtcg cgcgcgcccg gatgagtcgc atcaaagtaa gtggtattgc
    42121 cgaggaaatc catattgatc ggcaagccac gttccgtttg taccagccag ccgttttcac
    42181 gcatctcccg atagctttcg gtgcggttat ccaccgtcgg ccagacggag accatcagct
    42241 caattcccag cgatttcagc tcggcaatca tggcatcagg atcgggccag tcgcgcgcat
    42301 cgaacatcca gtcaccctga ttcggccagt gaaagaagtc gataacgatc accgagatag
    42361 gtagattgcg gcgcttatat tcgcgggcga cctccagcag ctcttcctgc gtacgataac
    42421 ggagtttgca ctgccagaag cccatggcgt agtccggcat catcggcggc gtgccggtag
    42481 ccagcgcgta agcccggcca atttctgccg gggtatcgcc agccgtgatc cagtagtcta
    42541 actgttcgct gacctgcgct tcccattcgg taacgttttg ggcaaaggtt acgcgtccga
    42601 ctgccgggtt gttccataaa aatccgtagc ccagactgga gagcataaat ggtactgagg
    42661 cctgggagtt acgttgcgcc agctcaagca cgcatccttt gagatccagg ttggcctgtt
    42721 gatactgccc catgccataa attttttccc cttcggtggc ttcgaagcgg gctttcagtg
    42781 aatatttccc accctgaatc gggcggaact cgcgtccctc aaggttgagt gcgctgacgt
    42841 actggccgtg agatgattca tcctcgccaa tttcgccccg caggcgccaa aactcctgca
    42901 acaggggttt gtgtggatgg cggtaaaagg taacttgtcc tttttgattg acgatagcga
    42961 taattttgcc gttggtcagc gttgcttggt ggtgctcata atcaatgtgg cactggcttt
    43021 ctgcgactgg ctcagtcaat gcccagtctt catttctcat taccggcaga tgacggccac
    43081 tgcgtacgcg caggctgttc tcgccccagg gttcaatcca taaatagcga tcgttttgct
    43141 gccagaccag acgacgtggg tcttgttgca taaatggcat ggtggtgcct cctatattcg
    43201 agggtgaagg taaagaacgt tatgagttga tggtttccag atcgtggcga atcttctctt
    43261 ccatcgcttc gtatttgcga aagaaaagta atgggatcgc tgcgagcgcg aagagtaggg
    43321 cgggtgccca gataaaggcc caggtaattc cctccagacc cgcagcactc tgggcatggt
    43381 tggggacata gccaaaactg ttcatgatcc aggcggctaa agcagtaccg aggccactac
    43441 ccatcttgat gcagaaggta ctgccgaagg cgataagaat gccggtagcc ttaataccgg
    43501 tcttccaggc gccgaaatca acggcgaagc ccagcatggc aaatggcatt gagcaggcga
    43561 taccgctgcc gatattgccg agtatccagg cggcgatgag gaaagtaatg ttgtccgctg
    43621 ccagccacat catgacgccg ccaaacgtgg cgaccagcag accgcctacc catatccagg
    43681 ttttagccag gtatttgcta aagaagggga tagcgatgat aaacaggatc tgaatcgtcg
    43741 ccaggctgtt aatcagcggc accagatctt tacggtcgag gttgtaggtc agataataga
    43801 caatggtcgt ggagcgctgc tgtagggcaa tccagaagat cagattagcc agcaccatca
    43861 gaatccatgg ccagttacct ttcatcgccg cgaaactttt tttcatcggc aacttaggtt
    43921 catgctgtat tttatccgca tccatttcac gaatgttttt aaacgcaaag agcgttagcg
    43981 cgcaagatat aatggcaaat gtaatcgccg tataaataaa accagcgtga tcatcaccgt
    44041 tacctaaaaa agcgactaac ggcaaggcgg tcgcgttcat taataaaacc ccaatttgcc
    44101 caccggtcat tcgccaggaa tttaaaacca gtctttcctt gggagataag gtcatcaggg
    44161 gtaatattgc actgagtggt gtattaagtc cggtaaatag aatgctggca atcatataag
    44221 atattgctgc atagatggct tttcctgtta tactgatatc aggagaccaa aatgacagcg
    44281 cgctgaatac cgcaaaaggc agcggtaacc ataaaaacca gggacgacat ttaccgtagc
    44341 gtgaacgcgt tttatcgatg atgatccccc atataggggc gtctatgcca tcgacaatac
    44401 gcgccagcag caggataatg cctgctacgg caaggctaat gcccgcaacg tctgtataga
    44461 aatataaaat gtacgttgaa ccgaagcagt atagcagatt acccgccaca tccaaagagc
    44521 cgtagctaat acgctgtagt aaagacaatg atgctgaccc ggaaggctgg gtatcctcaa
    44581 tgacagaact cataatgata actccgatat tggtacgata cgcccagaaa aacaacctct
    44641 actttctaag caagttttga atattatttt tatgtcgttt ctgaatttaa cctcagatta
    44701 aaatgagtaa gtaaggtgta catgaaaagt agttaacccg acggcatcaa tcaattatta
    44761 aatcttacat caggattgcg tttattagtt tttaaatgag cgatgttttt atttgctaag
    44821 gtggtcacag ttttttcagt aatgaaataa gaaaaggaaa acagtgaaag aaaataactt
    44881 tcaagtatta cgtgactaag ggagggatag ctgaaaaaat aggctggcac aggaagagcg
    44941 tgaacgagtg aggtcagcgc cagcggttga cgagaaaaac ggcagatagc aggcataaaa
    45001 aaacccgctt tacgcgggtt tttctacaaa gctgataaca agcaggcgat taagccagtt
    45061 tgttgatctg tgcagtcagg ttagctttat gacgtgcagc tttgtttttg tggatcagac
    45121 ctttagcagc ctgacggtcc acgatcggtt gcatttcgtt aaatgctttc agtgcagcag
    45181 ctttgtcgcc agcttcgata gctgcgtata ctttcttgat gaaagtacgc atcatagagc
    45241 gacggcttgc gttgtgctta cgagcctttt cagactgaac ggcgcgcttc ttagctgatt
    45301 tgatattagc caaggtccaa ctcccaaatg tgttctatat ggacaattca aaggccgagg
    45361 aatatgccct tttagccttc ttttgtcaat ggatttgtgc aaataagcgc cgtttaaatt
    45421 gcagcactcg ttgcgtagtg atggcgcagg attctaccag cttgcgtgct gtgaatacag
    45481 cctttccatg agaaaaattg cattaagcgg cgggttttgg ggcggagttt gccgcatggc
    45541 gatgaaaagc atcttcttta tgtttcatca gggcaatcgc cggttaacct taaccgctgt
    45601 acaaggtata ctcttgcgat tttcactgtt ttgagtcaga catgaagctg atacgcggca
    45661 tacataatct cagtcaggcc ccgcatgggt gtgtgctgac cattggtaat ttcgacggcg
    45721 tacatcgggg gcatcgcgct ctactgcagg gtttgcagga agaaggacgc agacgcggtc
    45781 tgccggtggt ggtcatgatt ttcgaaccgc agccgctgga gctgttcgca acggataaag
    45841 cgcccgcccg cctgacgcgc ctgcgtgaaa aactgcatta cctggcgcag tgcggcgtgg
    45901 actatgtgct atgcgtgaaa ttcgatcgcc gctttgccgc tttgacggcg caaacgttta
    45961 tcagcgaact gctggtggag cgacttggcg tgcaatttct tgccgtcggc gatgatttcc
    46021 gctttggtgc tagccgcgcg ggcgatttct tgttattaca gaaggcgggg gcggagtatg
    46081 gttttgcggt ttccagcacc caaacctttt gtgaaggcgg cgtgcgtatc agtagtaccg
    46141 cagtgagaca ggcgctggcg gaagataacc tggcgcttgc cgaaagtctg ctgggacatc
    46201 cctttactat ttccgggcgt gtcgttcatg gcgacgagct gggacgtacc attggcttcc
    46261 cgacggcgaa cttaccgctg cgccgtcagg tctcaccggt aaaaggggtc tatgcggtgg
    46321 aagtcaccgg gcttggcgat aagccgttac ccggcgtagc gaacattggc actcgtccaa
    46381 cggtggctgg cgtgcgtcaa caactggaag tgcatctgct ggacgttgta atggacctct
    46441 acggtcgcca tatagatgta atactgcgta aaaagatacg taatgagcag cgatttgcgt
    46501 cgcttgatga gctaaaagcg caaatcgcac gcgatgagtt aacggcccgc aagttttttg
    46561 ggctagccgg gcaggtgtaa ccctgacggt gtttatcaaa ccgaaatacg gaaccgagaa
    46621 tctgatgagt gactataaat cgaccctgaa tttgccggaa acagggttcc cgatgcgcgg
    46681 cgacctcgcc aagcgtgaac cgggaatgct ggcgcgttgg accgatgatg atctgtacgg
    46741 catcattcgt gcggccaaaa aaggcaaaaa aaccttcatt ctgcatgatg gccctccata
    46801 tgcgaatggc agcattcata ttggtcactc agttaacaag attctgaaag acattatcgt
    46861 gaagtccaaa ggactgtcgg gatttgactc gccttacgtg ccgggctggg actgtcacgg
    46921 tctgcctatc gagctgaaag tcgagcagga gttcggtaag ccgggcgaga aattcaccgc
    46981 cgctgaattc cgcgccaagt gccgcgaata tgccgccact caggttgacg gccagcgtaa
    47041 agacttcatt cgtctgggcg tgttgggcga ctggtcgcat ccgtacctga ccatggactt
    47101 caaaaccgaa gccaacatca tccgcgcgct gggcagaatt atcaaaaacg gtcatctgca
    47161 caaaggcgct aagccggtgc actggtgtgt tgactgtcgt tccgcgctgg cggaagcgga
    47221 agttgaatat tacgacaaaa cgtcgccgtc tatcgacgtg gcgttccgtg ccgtcgatca
    47281 ggatgcggtg aaagcgaagt ttggtttgcc gggcgtgagc ggccctgtgt cgctggttat
    47341 ctggaccacc acgccgtgga cgctgccggc taaccgcgcc atctccctgg cgccggactt
    47401 tgattatgcg ctggtgcaga tcgacggtca ggcggtgatt ctggcgaaag atctggttga
    47461 aagcgtcata cagcgtattg gcgcggctga atacaccatt ctcggcaccg tcaaaggcgc
    47521 ggagctggaa ctgctgcgct ttacccatcc gtttatgggc tttgacgtgc cggcgatcct
    47581 cggcgatcac gtcaccctgg atgctggtac cggtgccgtt cacaccgcac ctggccatgg
    47641 cccggacgac tatgtgattg gtcagaaata cggtctggaa acggctaacc cggttgggcc
    47701 ggacggcgct tacctgccag gcacatatcc aacgcttgac ggtgttaacg tcttcaaagc
    47761 gaacgatatc gttattgaac tgctgaaaga aaaaggcgcg ctactgcatg tcgaaaaaat
    47821 gcagcacagc tatccgtgct gttggcgtca caaaacgccg atcattttcc gcgcgacccc
    47881 gcagtggttc gtcagcatgg ataaagaagg gcttcgtcaa cagtcgctga aagagatcaa
    47941 aggcgttcag tggatcccgg actggggtca ggcgcgtatt gaatcaatgg tcgctaaccg
    48001 tcctgactgg tgtatctccc gtcagcgtac ctggggcgta ccgatgtcgc tgttcgtgca
    48061 taaagaaacg caggagctgc tgccgattga gcgtactctg gcggcgatgg aagaggtggc
    48121 gaaacgcgtt gaagttgacg gtatccaggc gtggtgggat ctcgacccga aagagatcct
    48181 cggcgaagat gctgatcaat atgagaaagt tccggatacg ttggacgttt ggtttgattc
    48241 cggttccacc agttactccg tggttgacgc ccgtccggaa ttcgccggtc acgctgccga
    48301 tatgtatctg gaagggtctg accagcatcg cggctggttt atgtcctccc tgatgattag
    48361 cgtggcgatg aaaggcaaag cgccataccg ccaggtactg actcacggct tcaccgtcga
    48421 tggtcagggg cgcaagatgt ccaagtccat cggtaacacc gtgtcgccgc aggatgtgat
    48481 gaataaactg ggcgcggata tcctgcgtct gtgggtggcg tctactgact ataccggcga
    48541 aatggcggtc tctgacgaaa tcctgaaacg tgctgctgac agctatcgtc gtatccgtaa
    48601 taccgcgcgc ttcctgctgg cgaacctcaa tggcttcaat ccggccaccg atatggtcaa
    48661 accggaagag atggtggtgc tggacaggtg ggcggtgggc tgcgcgaaaa cggcgcagca
    48721 agagattctg aaggcatacg aagcttacga cttccatgaa gtggtacagc gcctgatgcg
    48781 cttctgctcc gttgaaatgg ggtcgttcta cctcgacatc atcaaagacc gccagtacac
    48841 cgcgaaggcc gatagcgtcg cgcgtcgtag ctgccagact gcgctgtatc atatcgcaga
    48901 ggcgctggtt cgctggatgg cgccgatcat gtccttcacg gctgatgaaa tctggggcta
    48961 cctgccgggc gagcgtgaaa aatatgtctt caccggcgaa tggtacgacg ggttgtttgg
    49021 cctggaagag aatgaagaat ttaatgacgc attctgggac gatgtccgct atatcaagga
    49081 ccaggtcaac aaagagctgg aaaatcagaa ggccaatggc atcaaatcga acctggaagc
    49141 aaaagtgacg ctgaaatatg ctgacgatgc taacggtacg atcaagaagc tgaaactgtt
    49201 gggcgaagag gtcagattta tcttcattac ttcccagttc gtgatttctg agcaagcggg
    49261 gggtattgat gatgaaaata ttcagtacaa tgctggtaat acgacagttc aggcagtggt
    49321 aacgcgtgcc gagggtgata agtgtccgcg ctgctggcac tacactactg atgtcggcaa
    49381 ggtggcggaa catgcagata tctgcggacg ctgtgtcagc aacatcgccg gtaatggcga
    49441 acaacgtaaa tttgcctgat gagtaaacca ctctgttcaa caggactacg ctggctatgg
    49501 ctggtagtag tcgtgctgat tatcgatttg ggcagcaaat acctgatcct ccagaatttc
    49561 gctctggggg atacggtagg gctgttcccg tcgcttaatc tgcattatgc gcgtaactac
    49621 ggcgcggctt ttagcttcct ggcggatagc ggcagctggc agcgctggtt ctttgccggg
    49681 attgcgatag ggatctgcgt aattcttttg gtgatgatgt atcgctcgaa agcgacgcag
    49741 aagctgaata acatcgctta tgcgctcatt attggcggcg cgctgggtaa tttgttcgat
    49801 cgtctgtggc acggcttcgt tgtcgatatg atcgattttt acgtcggcga ctggcatttc
    49861 gcgacgttca accttgccga tacggcaatt tgtatcggtg ctgcgctgat agtactggaa
    49921 ggctttttgc cgaagccgac agcgaaagag caggcataag cgtaaatacc gggttgcgct
    49981 tatccggttt tgtaggcctg ataagcgcag cgccatcagg caaacgtggt gccggatggc
    50041 ggtgaaaacg ccttatccgg cctacggttt tatcgttctt tgtgcctccg ggcaaaacac
    50101 gtgagcaatt tgcatgtcta aatccgtaca gagcaacagc gcgatcctcg ttcacttcac
    50161 cctgaaactg gatgatggct caacggcgga atctacccgc aataacggca agccagccct
    50221 gttccgtctt ggcgatacct cgctttccga aggtctggag cagcagcttc tggggttgaa
    50281 agaaggggaa aagaaagcgt tttcgctgga gcctgacgcc gcgtttggcg tccccagtcc
    50341 ggacttgatc cagtatttct cgcgccgtga gtttatggcg gcgggcgaac cggaagtcgg
    50401 ggcgattatg ctttttaccg caatggatgg cagcgaaatg cctggcgtga ttcgcgaaat
    50461 caacggcgac tcgattaccg ttgattttaa ccatccgctg gccgggcata ccgttcactt
    50521 tgatattgaa gtgctggaaa tcgatccggc gctggaggca taaacatgca gatcctgttg
    50581 gccaacccac gcggtttttg cgccggggta gaccgcgcta tcagcattgt tgaaaatgcg
    50641 ctcgccattt acggcgcgcc aatttacgtt cggcacgaag tcgtgcataa ccgctatgta
    50701 gtggacagcc tgcgccagcg cggagcgatc tttatagagc aaattagcga agtgccggat
    50761 ggcgccattc tgatcttctc cgctcatggg gtttcccagg cggtgcgtaa cgaggcgaaa
    50821 agccgcgatc ttaccgtttt tgacgccacc tgcccgctgg tgacgaaagt ccatatggaa
    50881 gtggcgcgcg ccagccgtcg cggtgaagaa tctattctca tcggccacgc cgggcacccg
    50941 gaagtggaag gcaccatggg ccagtacagc aatccggaag gggggatgta cctggtggag
    51001 tcgccagagg acgtctggac gctgaatgtc aaaaatgaag gcaagctctc cttcatgacg
    51061 caaaccacgc tttccgtgga cgatacgtcc gatgtgattg atgcgctgcg taaacgcttt
    51121 ccgaaaatcg tcggcccgcg caaagacgat atttgctatg ccactactaa tcgtcaggaa
    51181 gcggtgcggg cgctggctga gcaggctgac gtagtgctgg tggttggctc gaaaaactct
    51241 tctaactcta accgattggc ggaactggcc caacggatgg gaagaaccgc gtttcttatc
    51301 gacgatgcgg cggatatcca ggaggcgtgg gtgaaagacg ccgcctgtgt cggcgtcacc
    51361 gctggcgctt ccgcgccgga tattctggtg cagaatgtta ttgcgcgtct gcgggagttt
    51421 ggcggcggcg aagctgtcac gcttgagggt cgcgaagaaa atattgtttt cgaagtaccg
    51481 aaagagctgc gtgtggatgt tcgtgaagtc gaataagatt tcacaattca gaaatctgcc
    51541 cgatgatgct acgctgacca gatcttaaga atttcttttg atattcaatg tgcgacagga
    51601 aaaataaggc gtagtcgtca tccggtgcta atgccccacc tttttgctat tcatctgaaa
    51661 aaccagcaca atcgttgctg gtttttgggt tgtaatgcct acagggataa gggaaatggg
    51721 caaaataaaa tatagattgc caacgttact cgccatcggc ttttggatgg acgcggcaag
    51781 cgctacggtg ctggagctac ccgcctggga gcgaaactat accgggacta tcgcggggaa
    51841 accggtaaac gttaatatca cgcgatttgg taacacgctt tatgggcatt actgctatga
    51901 accttgcaat cagcacaagg cagtgattgt tctacgcggc tcactccagg ataaagaggt
    51961 gcatcttgaa gaacgcgtaa aggcgctttc gggttactgg aatgcggaaa tctccagcag
    52021 tgagattaaa ggcgaatgga cgtccgcaga taaaaaacga cattttcctg ttgcccttat
    52081 ctattacaaa cctaaaaact cccctgatat tgtgctggtc acgaacacga atgatgcagg
    52141 gggttacgac ccttccaaag agattgattg cggcaatacg ccggccattt cggcgataaa
    52201 attataccgt gatggtaaac tcatacagac cttagatacc gcctcggtgg gcacctgtag
    52261 cccgtttatg cctcaatggg gggatgtcaa ttttgatggc tacccggatc tatcgattgt
    52321 aacagagtta cttgctgggc cggatgctcc agtacaaaca tggctctatg accccgccaa
    52381 gcagcgttat gttgatgcgc ccgcgtctta tcaggagatc acttcaccag agatcgatgc
    52441 tgaacataaa cagattgtca gctattggcg cggcggttgc tgcagccatg gcgtcaatgt
    52501 gtatcgctgg aaaggaaaaa cgattgaact gatcgatcgc ggtgaaagct actttcagcc
    52561 tgtgataagt aaaggcaaaa tgtataactg ctacatgaca ccttcctacg ctgatgggcg
    52621 tattatttat ccgctagtac gtaaaaatgg tcatttgacg ccgcctctta gccttgatgg
    52681 gacgtgtcaa tctttttggc taaccggtaa tgttcgtacc gtgattcagg cagaaaaacc
    52741 cggcgctgag cccgaatcgc ttgagattca gtggcaggaa aacaaagcat cgccagggcg
    52801 tttttgccca ttagttccgt ttgtcgaagg tgataagcta agtccgcgtc tggtgacgga
    52861 tgacgatgtg cctgatacct gtatcagtcg cgctgagtat gaagatataa aacaataggt
    52921 caggagagcg ttaatgacag catccctaca cattattctt gataccgatc cgggcattga
    52981 tgacgcggct gcgattgccg ctgcgctgtt cgccccccag cttgatctgc aactaataac
    53041 caccgtcgca ggcaatgttt ccgttgaaaa aacgacccgt aatgcgttgc agcttctgca
    53101 tttctggaac agcgatatcc cacttgccca gggggccgcg acgccgctgc tgcgtccgtt
    53161 acgcgatgcg gcatacgtcc acggcgaatc cggtatggaa ggctatgatt ttgtcgacca
    53221 tcagcgtcaa ccgttggcga agcctgcgtt tatcgctatc cgggatgtgt tgatgaacgc
    53281 cccggagccc atgacattgg tggcgattgg gccattgacc aatattgcgt tgctactgat
    53341 gcactatccg gagtgtgcgt gtaacattcg ccgtctggtg ttgatgggcg gttccgcagg
    53401 gcgcggcaat tttacgccta atgctgaatt taacattgct gtcgatccgg aggccgcggc
    53461 gctggtgttc cgcagcggtc tggagattgt gatgtgtggg cttgatgtca cgaatcaggc
    53521 aatgctctcg ccagattttc tgaataaact gcctgcgctg aatcgcaccg gtaagatgtt
    53581 gcacagcctg ttcaaccatt atcgcagcgg tagtatgcgc actggcgtcc ggatgcacga
    53641 tctctgtgcg atcgcctggc tggtgcgtcc ggagcttttt accctgcaat cctgttttgt
    53701 ggccgtagaa acgcaggggg aatataccgc aggcacgacg gtcgttgata ttgaagggcg
    53761 tctggggcag cccgccaacg cgcaggtggc gctggcgctg gatgtggacg gttttcgtca
    53821 gtgggtggct gaggtgtttg cctatgtgcc gtaattacat gttggcgcca taatctcata
    53881 ctttgccgcg atagagtctc tccggcctgc ccactttccc gtagctgatc tccgcttcga
    53941 gaaagttatt tttcacgcct tgttccagat agcgtcgggc agtggtttta ctgctgccca
    54001 gaatttgcgc cagagtgtct gctgtatgta ctgcctgcgg gtcggcgaat atttgtcgta
    54061 cccggttgaa ggtgttttca tcaattcccc gcagtccgct attcggttct gcggtttgtt
    54121 ctttggcctg gatattaaat aaggcatcaa cgtgcgtctg gtttgcctgc tcactggaac
    54181 gtaacgaact gcggtaacgg gtgaaccgct ccagggtatg ctgcaggcgc tgataatgta
    54241 ccggcttaat cagataatcg aatacgccca tgcgtaaggc atcgctgatg gtatccatat
    54301 gattgtcggc ggtaatgaaa ataattcgcc ccgtgtagtt ggtgctgatg gtatgacgaa
    54361 ttaaatcgat ccctttgcca tcgggtaaaa aattatccaa tagaattaac tgtggttgat
    54421 agaggcgtat ttgcttcttc gcactttcca gcttgtctgc gataccgacg attgaaaact
    54481 gaggaaaaag cttgatggtg tccaccagga tttccgctag catcggttcg tcttcaacga
    54541 tgagtgtcgt aatgctatcc atgttattct tctctggtaa aagggatata gagggtaaaa
    54601 atggtgccaa aagaattatt gttatcgacg ataatgtcgc cattggcctg cttgacgtag
    54661 ctgtgcacca accataatcc aattccgtga tcgccgttgt tgtgggtggt cactccacgc
    54721 tcgaaaatat gctggcggat attttcgtca ataccacatc cctgatcggc aacttcaata
    54781 atgacttcat taccttcgct attgatcagg cactcaatct gtcgcgagcc ttcgcgattg
    54841 agcagggtgg cgttataggc gttgtccaat aaattgccaa caatcgaaat ccattcatta
    54901 tgcgagagcg atgacggcag gtgttcaaca aagcttgaag gatcgaaaat cagctccagc
    54961 cccagctctt ttgcccgata atatttaccg attaatagcc ccgcaaggtg gtggtcgcgg
    55021 aaattatggg aaataaaatc gagtactttt tggtggcttt ccgactgctg ctgaatcagc
    55081 gccagcgcat tatcgtagcg cttcaggaac agcagtccgg caatggtgga aataaggttg
    55141 cgatgctcat gctgcacggc gcgcaggtta tcggcgtatt gccgcacctg acttaactgc
    55201 aggttgagtg tattgatatc gtctttgttg cgaaagctaa taacccagcc ctgaggctgg
    55261 ttgtcaataa tgaccgccat gcgactggcg atgactttca tttggttaaa agtgacgatc
    55321 tcatcttttt tgtttttttg cggcgcatcg taaaagaagg cctccggcaa cacgatatgg
    55381 tggattgcat agccaatgag ttcagactcc ggttggctca gattcagtaa gcggcgagcc
    55441 gtttgattaa tggcggtaat acggtgatgg gagtcaatgg cgatcaaccc ttcaaatacc
    55501 gactcaaata acacgctttg ctgaattaat agttgtgaaa gctgctgcgg ctccatgtta
    55561 agcatctgct ttttaatatg cagcgagaag cggcgggcgc agtacaacag caccagcaac
    55621 agtatcgcca tcgggaacag caacgagctg atttgtaagt taagccagct ctccaactgt
    55681 tccagagtat agccgacgga aacaataccg atgactttac cggtactgtc ctgaatcggg
    55741 gatttaccac gcaaggaaga gcctaatgaa cctttgcgca ccgatacgta gcttttagca
    55801 ttatacagcg cgtcgtcgct atcgccgccc tccatatatt tgccgatctc atccgggttg
    55861 acgtgataca gtcgctgacc tttttcgttg ccaacggtaa tgtaagtcgc gtccgaaaac
    55921 gagcgcattg ggtcaatcag cgctttgatg cgtgacaaat catgcgcctc tacggcttca
    55981 actaattctg gcatagcgga tatttgcatt gcttgaataa gcgcacgttg gcccacctga
    56041 taatgcaggc gctctttcgt gatatcggtc agataccagg tgattgccag catcacgatg
    56101 gtggatgtaa acaggatcag tagaaatatc cggttttgaa acgagcgtct ggcaaaccag
    56161 tgtgtaattt cccgtataaa catattggta tttagatatt taattacggt attttcttgc
    56221 attcggcatc accggaacct gaaccagttc atacttactt ttctttcaga aaaaatttgg
    56281 atgaaaatgg gatacgacat gcgtatccca tccactatta catcgccagc acgtatttca
    56341 gcatcacccc ggcggctatc gccgagccaa tcaccccggc cacgttcggg cccatcgcgt
    56401 gcatcagcag gaagttctgc gcgtctgatt ccaggcccac tttgttcgat acgcgtgccg
    56461 ccatcggcac tgccgacacc ccggctgaac ctatcagcgg gttgattttg ttcttactgc
    56521 acaggttcag cagcttcgcc atcagcaccc cggccgccgt cccgatacca aaggcaatca
    56581 cccccagcag cagaatgccc agcatctgcg gctgcaggaa cttatccgcg accagcttcg
    56641 cgcccaccga cagcccgagg aaaatggtca cgatattaat cagaccgttc tgcaccgtgt
    56701 cgctcagacg ctccaccacc ccgctttcac gcatcagatt gccgaagcag aacatcccca
    56761 gcagcggcgc ggcgtccggc agcagcaggg ccaccagcag taacagcacc accggaaaga
    56821 ggattttttc ccgcttactc accgtgcgca gctgcaccat gcggattttg cgctctttct
    56881 cgctggtcag cgcgcgcata atcggcggct ggattaacgg caccagcgcc atatacgagt
    56941 aggccgccac cgcaatggcc cccagcagct ccggtgccag ctt
//
LOCUS       DAGWFR010000011        50199 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.011, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000011 DAGWFR010000000
VERSION     DAGWFR010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 50199)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 50199)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..50199
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.011"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..294)
                     /gene="hycB"
                     /locus_tag="MOX77_000768"
     CDS             complement(<1..294)
                     /gene="hycB"
                     /locus_tag="MOX77_000768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase subunit HycB"
                     /protein_id="HCA3356397.1"
                     /translation="MNRFVIADSTLCIGCHTCEAACSETHRQHGLQSMPRLKVMLNEK
                     ESAPQLCHHCEDAPCATVCPVNAINRVDGAVQLNESLCVSCKLCGIACPFGAIE"
     gene            complement(440..901)
                     /gene="hycA"
                     /locus_tag="MOX77_000769"
     CDS             complement(440..901)
                     /gene="hycA"
                     /locus_tag="MOX77_000769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase regulator HycA"
                     /protein_id="HCA3356398.1"
                     /translation="MTIWEISEKADYIAQRHRRLQDQWHIYCNSLVQGITLSKARLHH
                     AMSCAPERDLCFVLFEHFRIYVALADGFNSHTIEYYVETKDGEDKQLIAQAQLDIDGK
                     VDERVNNRDREQVLEHYLEKIASVYDSLYTAVETNSPVNLRQLVKGHSPAV"
     gene            1111..1467
                     /gene="hypA"
                     /locus_tag="MOX77_000770"
     CDS             1111..1467
                     /gene="hypA"
                     /locus_tag="MOX77_000770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation nickel metallochaperone
                     HypA"
                     /protein_id="HCA3356399.1"
                     /translation="MHEITLCQRALELIEQQASAYGAKRVTAVWIKIGAFSCVETSAL
                     SFCFDLVCRGTIAEGCKLHLEEQEAECWCEHCQQYVTLLTHRVRRCPQCHSDTLRIVA
                     DDGLQIRRIEIDETED"
     gene            1537..2409
                     /gene="hypB"
                     /locus_tag="MOX77_000771"
     CDS             1537..2409
                     /gene="hypB"
                     /locus_tag="MOX77_000771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase nickel incorporation protein HypB"
                     /protein_id="HCA3356400.1"
                     /translation="MCTTCGCAEGNLYIEGDEHNPHSAFRSAPFAPAARPALNITGIK
                     TPDFTPSQTAEGDLHYGHGEAGTHAPGMSQRRMLEVEIDVLDKNNRLAERNRARFAAR
                     QQLVLNLVSSPGSGKTTLLTETLMKLKDRVPCAVIEGDQQTVNDAARIRATGTPAIQV
                     NTGKGCHLDAQMIADAAPRLPLDDHGILFIENVGNLVCPASFDLGEKHKVAVLSVTEG
                     EDKPLKYPHMFAAASLMLLNKVDLLPYLNFDVEKCIASAREVNPEIEIILISATSGEG
                     MDQWLAWLEAQRCA"
     gene            2400..2672
                     /gene="hypC"
                     /locus_tag="MOX77_000772"
     CDS             2400..2672
                     /gene="hypC"
                     /locus_tag="MOX77_000772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 3 maturation protein HypC"
                     /protein_id="HCA3356401.1"
                     /translation="MCIGVPGQIRAIDGNQAKVDVCGIQRDVDLTLVGSCDENGQPRL
                     GQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEPDVGALLYGEER"
     gene            2672..3793
                     /gene="hypD"
                     /locus_tag="MOX77_000773"
     CDS             2672..3793
                     /gene="hypD"
                     /locus_tag="MOX77_000773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461778.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase formation protein HypD"
                     /protein_id="HCA3356402.1"
                     /translation="MRFVDEYRAPEQVMQLIEHLRERAALLPYTAERPLRIMEVCGGH
                     THAIFKFGLDQLLPENVEFIHGPGCPVCVLPMGRIDSCVEIASHPEVIFCTFGDAMRV
                     PGKQGSLLQAKARGADVRIVYSPMDALKLAQDNPTRKVVFFGLGFETTMPTTAITLQQ
                     AKQRDVRNFYFFCQHITLIPTLRSLLEQPDNGIDAFLAPGHVSMVIGTEAYQFIAADF
                     HRPLVVAGFEPLDLLQGVVMLVEQKIAALSQVENQYRRVVPDAGNMLAQQAIADVFCV
                     NGDSEWRGLGVIESSGVHLTPEYQRFDAEAHFRPAPQQVYDDPRARCGEVLTGRCKPH
                     QCPLFGKTCNPETAFGALMVSSEGACAAWYQYRQQECEV"
     gene            3790..4800
                     /gene="hypE"
                     /locus_tag="MOX77_000774"
     CDS             3790..4800
                     /gene="hypE"
                     /locus_tag="MOX77_000774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417210.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase expression/formation protein HypE"
                     /protein_id="HCA3356403.1"
                     /translation="MNNIQLAHGSGGQAMQQLINSLFMEAFANPWLAEQEDQARLELA
                     QLTAEGDRLAFSTDSYVIDPLFFPGGNIGKLAICGTANDVAVSGAIPRYLSCGFILEE
                     GLPMETLKSVVNSMAATAREAGIAIVTGDTKVVQRGAADKLFINTAGMGAIPADIHWG
                     AQTLSVGDVLLVSGTLGDHGATILNLREQLGLDGELASDCAVLTPLIQTLRHIDGVKA
                     LRDATRGGVNAVAHEFAASCGYGIELSESALPLKPAVRGVCELLGLDALNFANEGKLV
                     IAVERQAADRALAALRAHPLGRDAALIGEVVERKGVRLAGLYGVKRTLDLPHAEPLPR
                     IC"
     gene            5019..7097
                     /gene="flhA"
                     /locus_tag="MOX77_000775"
     CDS             5019..7097
                     /gene="flhA"
                     /locus_tag="MOX77_000775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase transcriptional activator
                     FlhA"
                     /protein_id="HCA3356404.1"
                     /translation="MSYTPMSDLGQQGLFDITRTLLQQPDLASLSEALSQLVKRSALA
                     DSAGIVLWQAQSQRAQYYATRENGRPVEYEDETVLAHGPVRRILSRPDALHCNFHEFT
                     ETWPQLAASGLYPEFGHYCLLPLAAEGRIFGGCEFIRQEDRPWSEKEYDRLHTFTQIV
                     GVVAEQIQNRVNNNVDYDLLCRERDNFRILVAITNAVLSRLDINELVSEVAKEIHHYF
                     NIDAISIVLRSHRKNKLNIYSTHYLDEHHPAHEQSEVDEAGTLTERVFKSKEMLLINL
                     NERDPLAPYERMLFDTWGNQIQTLCLLPLMSGKTMLGVLKLAQCEEKVFTTANLKLLR
                     QIAERVAIAVDNALAYQEIHRLKERLVDENLALTEQLNNVDSEFGEIIGRSEAMYNVL
                     KQVEMVAQSDSTVLILGETGTSKELIARAIHNLSGRSGRRMVKMNCAAMPAGLLESDL
                     FGHERGAFTGASAQRIGRFELADKSSLFLDEVGDMPLELQPKLLRVLQEQEFERLGSN
                     KLIQTDVRLIAATNRDLKKMVADREFHNDLYYRLNVFPIQLPPLRERPEDIPLLVKAF
                     TFKIARRMGRNIDSIPAETLRTLSGMEWPGNVRELENVVERAVLLTRGNVLQLSLPDM
                     TAVTPDTSPVATESAKEGEDEYQLIIRVLKETNGVVAGPKGAAQRLGLKRTPLLSRMK
                     RLGIDKDALA"
     gene            complement(7159..7503)
                     /locus_tag="MOX77_000776"
     CDS             complement(7159..7503)
                     /locus_tag="MOX77_000776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide-stimulated promoter family
                     protein"
                     /protein_id="HCA3356405.1"
                     /translation="MPGKRIAREKLTIKKMIALYESQCPQASAVQGHYDALFAYAQKR
                     LDKCVFGEEKPACKQCPVHCYQPAKREEMKQIMRWAGPRMLWRHPVLTVRHLIDDKRP
                     VPELPEKYQRKK"
     gene            7685..8602
                     /gene="sitA"
                     /locus_tag="MOX77_000777"
     CDS             7685..8602
                     /gene="sitA"
                     /locus_tag="MOX77_000777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron/manganese ABC transporter substrate-binding
                     protein SitA"
                     /protein_id="HCA3356406.1"
                     /translation="MTNLHRLKTLLIAGIVAILALSPAYAKEKFKVITTFTVIADMAK
                     NVAGDAAEVSSITKPGAEIHEYQPTPGDIKRAQGAQLILANGLNLERWFARFYQHLSG
                     VPEVVVSTGVKPMGITEGPYNGKPNPHAWMSAENALIYVDNIRDALVKYDPDNAQIYK
                     QNAERYKAKIRQMADPLRAELEKIPADQRWLVTSEGAFSYLARDNDMKELYLWPINAD
                     QQGTPKQVRKVIDTIKKHHIPAIFSESTVSDKPARQVARESGAHYGGVLYVDSLSAAD
                     GPVPTYLDLLRVTTETIVNGINDGLRSQQ"
     gene            8599..9420
                     /gene="sitB"
                     /locus_tag="MOX77_000778"
     CDS             8599..9420
                     /gene="sitB"
                     /locus_tag="MOX77_000778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron/manganese ABC transporter ATP-binding
                     protein SitB"
                     /protein_id="HCA3356407.1"
                     /translation="MSQSAITVDQVTVTYRNGHTALRDATFQVPGGSIAALVGVNGSG
                     KSTLFKALMGFVHLARGDITILQQSVNQALKKNLIAYVPQSEEVDWSFPVLVEDVVMM
                     GRYGHMGWLRRPTAHDHACVDAALARVDMQEYRHRQIGELSGGQKKRVFLARAIAQDG
                     QVILLDEPFTGVDVKTEARIIDLLRELRDEGRTMLVSTHNLGSVTEFCDYTVMIKGTV
                     LASGPTETTFTAANLELAFSGVLRHIALSGGEEHIITDDERPFISRRVASGGKSS"
     gene            9417..10277
                     /gene="sitC"
                     /locus_tag="MOX77_000779"
     CDS             9417..10277
                     /gene="sitC"
                     /locus_tag="MOX77_000779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron/manganese ABC transporter permease subunit
                     SitC"
                     /protein_id="HCA3356408.1"
                     /translation="MNWLVEPFGYQYMLNAMWVSAMVGGLCAFLSCYLMLKGWSLIGD
                     ALSHSIVPGVAGAWMLGLPFSLGAFLSGGLAAGSMLFLNQRSRLKEDAIIGLIFSSFF
                     GVGLFMVSLNPMSVNIQTIILGNVLAIAPADITQLAIIGAVSLTILLLKWKDLMVVFF
                     DETHARSIGLNPGRLKLLFFTLLSVSTVAALQTVGAFLVICLVVTPGATAWLLTDRFP
                     RLLMIAVVIGSLTSFLGAWLSYWLDGATGGIIVVMQTLLFITAFIFAPKHGLLANRRR
                     ARLQKEPTCS"
     gene            10268..11116
                     /gene="sitD"
                     /locus_tag="MOX77_000780"
     CDS             10268..11116
                     /gene="sitD"
                     /locus_tag="MOX77_000780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron/manganese ABC transporter permease subunit
                     SitD"
                     /protein_id="HCA3356409.1"
                     /translation="MFLATLLEPFQFDFMVNALMVSVIVAIPCALLSVFLVLKGWALM
                     GDAMSHAVFPGVVLAYIVGIPLAIGAFIAGLFCAIATGYLDDNSRIKRDTVMGIVFSG
                     MFGAGLVLYVSIQSEVHLDHILFGDMLGVSLGDIVQTSVIALGIALIIGLKWKDLLLH
                     AFDPHQAKASGLNTTLLHYGLLCMIALTIVATLKSVGIILSISLLIAPGAIAILLTRR
                     FARALGLAVSLSVITAFAGVYLSFYLDSAPAPTIVVLFAIVFIAVFIYATWRDRRNEI
                     VPEAQG"
     gene            complement(11393..12148)
                     /locus_tag="MOX77_000781"
     CDS             complement(11393..12148)
                     /locus_tag="MOX77_000781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HCA3356410.1"
                     /translation="MRNVIIYGINWTNCYALQSIFKQKYPEKCVKTCNSLTALLHSLS
                     DMPDAGLILALNPHEHVYLFHALQARLQNRKVLVVADRLYYIDRCVLQYFGVMDYVLK
                     DELSCAIRSEREKLRLPEAWLRFCHRPQKKTVAATYAFNAGETPEEVLFNINQYAWWN
                     LPPGVTQAKYALLILLSSGHPAIELAKKFGLGTKTVSIYRKKVMYRLGMDSSPLSLFR
                     GLKLDAHLQRTAFAHNPAVPDDNCALPIAVGMN"
     gene            complement(12533..13420)
                     /gene="sirC"
                     /locus_tag="MOX77_000782"
     CDS             complement(12533..13420)
                     /gene="sirC"
                     /locus_tag="MOX77_000782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator SirC"
                     /protein_id="HCA3356411.1"
                     /translation="MVLPSMNKSVEAISNNHLQQPNKFPLINGLADVRDYYVANCLLF
                     KLNKGSLRIENEFGEFIEQSALCLFLLEKDQTITLSMSEIEGHIDFSSLEVSYDLMQK
                     FYKVFYSTRNYNDRELSLKTKPKYFFHADLLPGMSDTFDSILHGVACPRVCSNVSIDD
                     HDYSYFSLMYLISAFVRKPGGFDFLERAIKITTKEKVYNIIISDLTRKWSQAEVAGKL
                     FMSVSSLKRKLAAEEVSFSKIYLDARMNQAIKLLRMGAGNISQVATMCGYDTPSYFIA
                     IFKRHFKITPLSFMRTMNH"
     gene            complement(13766..14218)
                     /locus_tag="MOX77_000783"
     CDS             complement(13766..14218)
                     /locus_tag="MOX77_000783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector protein OrgC"
                     /protein_id="HCA3356412.1"
                     /translation="MIPGTIPTSYLVPTADTEVTGVVSLSARAAMLNNVDSAPLSNGG
                     DVDLYDAFYQRLLALPESASSETLKDSIYQEMNAFKDPKSGDSAFVSFEQQTAMLQNM
                     LAKVEPGTHLYEALNGVLVGTMNAQSQMTSWMQEIILSGGENKEAIDW"
     gene            complement(14234..14905)
                     /gene="orgB"
                     /locus_tag="MOX77_000784"
     CDS             complement(14234..14905)
                     /gene="orgB"
                     /locus_tag="MOX77_000784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010835247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system linker protein OrgB"
                     /protein_id="HCA3356413.1"
                     /translation="MLKNIPIPSPLSPVEGILIKRKTLERYFSIERLEQQAHQRAKRI
                     LREAEEEAKTLRMYAYQEGYEQGMIDALQQVAAYLTDNQTMAWKWMEKIQIYARELFS
                     AAVDHPETLLTVLDEWLRDFDKPEGQLFLTLPVNAKKEHQKLMVLLMENWPGTFNLKY
                     HQEQRFIMSCGDQIAEFSPEQFVETAVGVIKHHLDELPQDCRTISDNAINALIDEWKT
                     KTQAL"
     gene            complement(14862..15461)
                     /gene="orgA"
                     /locus_tag="MOX77_000785"
     CDS             complement(14862..15461)
                     /gene="orgA"
                     /locus_tag="MOX77_000785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-regulated invasion protein OrgA"
                     /protein_id="HCA3356414.1"
                     /translation="MIRRNRQMNRQPLPIIWQRIIFDPLSYIHPQRLQIAPEMIVRPA
                     ARAAANELILATWRLKNGEKECIQNSLTQLWLRQWRRLPQVAYLLGCHKLRADLARQG
                     ALLGLPDWAQAFLAMHQGTSLSVCNKAPNHRFLLSVGYAQLNALNEFLPESLAQRFPL
                     LFPPFIEEALKQDAVEMSILLLALQYAQKYPNSVPAFAC"
     gene            complement(15433..16191)
                     /gene="prgK"
                     /locus_tag="MOX77_000786"
     CDS             complement(15433..16191)
                     /gene="prgK"
                     /locus_tag="MOX77_000786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system inner membrane ring
                     lipoprotein PrgK"
                     /protein_id="HCA3356415.1"
                     /translation="MIRRYLYTFLLVMTLAGCKDKDLLKGLDQEQANEVIAVLQMHNI
                     EANKIDSGKLGYSITVAEPDFTAAVYWIKTYQLPPRPRVEIAQMFPADSLVSSPRAEK
                     ARLYSAIEQRLEQSLQTMEGVLSARVHISYDIDAGENGRPPKPVHLSALAVYERGSPL
                     AHQISDIKRFLKNSFADVDYDNISVVLSERSDAQLQAPGTPVKRNSFATSWIVLIILL
                     SVMSAGSGVWYYKNHYARNKKGITADDKAKSSNE"
     gene            complement(16188..16493)
                     /gene="prgJ"
                     /locus_tag="MOX77_000787"
     CDS             complement(16188..16493)
                     /gene="prgJ"
                     /locus_tag="MOX77_000787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system inner rod protein
                     PrgJ"
                     /protein_id="HCA3356416.1"
                     /translation="MSIATIVPENAVIGQAVNIRPMETDIVSLDDRLLQAFSGSAIAT
                     AVDKQTITNRIEDPNLVTDPNELAISQEMISDYNLYVSMVSTLTRKGVGAVETLLRS"
     gene            complement(16512..16754)
                     /gene="prgI"
                     /locus_tag="MOX77_000788"
     CDS             complement(16512..16754)
                     /gene="prgI"
                     /locus_tag="MOX77_000788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system needle filament
                     protein PrgI"
                     /protein_id="HCA3356417.1"
                     /translation="MPTSWSGYLDEVSAKFDKGVDNLQTQVTEALDKLAAKPSDPALL
                     AAYQSKLSEYNLYRNAQSNTVKVFKDIDAAIIQNFR"
     gene            complement(16779..17957)
                     /gene="prgH"
                     /locus_tag="MOX77_000789"
     CDS             complement(16779..17957)
                     /gene="prgH"
                     /locus_tag="MOX77_000789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system inner membrane ring
                     protein PrgH"
                     /protein_id="HCA3356418.1"
                     /translation="METSKEKTITSPGPYIVRLLNSSLNGCEFPLLTGRTLFVVGQSD
                     ALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNPESRSVQLNTP
                     IQVGELLILIRPESEPWVPEQPEKLETSAKKNEPRFKNGIVAALAGFFILGIGTVGTL
                     WILNSPQRQAAELDSLLGQEKERFQVLPGRDKMLYVAAQNERDTLWARQVLARGDYDK
                     NARVINENEENKRISTWLDTYYPQLAYYRLHFDEPRKPVFWLSRQRNTMSKKELEVLS
                     QKLRALMPYADSVNITLMDDVTAAGQAEAGLKQQALPYSRRNHKGGVTFVIQGALDDV
                     EILRARQFVDSYYRTWGGRYVQFAIELKDDWLKGRSFQYGAEGYIKMSPGHWYFPSPL
                     "
     gene            18273..19202
                     /gene="hilD"
                     /locus_tag="MOX77_000790"
     CDS             18273..19202
                     /gene="hilD"
                     /locus_tag="MOX77_000790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator HilD"
                     /protein_id="HCA3356419.1"
                     /translation="MENVTFVSNSHQRPAADNLQKLKSLLTNTQQQIKSQTQQVTIKN
                     LYVSSFTLVCFRSGKLTISNNHDTIYCDEPGMLVLKKEQVVNVTLEEVNGHMDFDILE
                     IPTQRLGALYALIPNEQQTKMAVPTEKAQKIFYTPDFPARREVFEHLKTAFSCTKDTS
                     KGCSNCNNKSCIENEELIPYFLLFLLTAFLRLPESYEIILSSAQITLKKRVYNIISSS
                     PSRQWKLTDVADHIFMSTSTLKRKLAEEGTSFSDIYLSARMNQAAKLLRIGNHNVNAV
                     ALKCGYDSTSYFIQCFKKYFKTTPSTFIKMANH"
     gene            20289..21950
                     /gene="hilA"
                     /locus_tag="MOX77_000791"
     CDS             20289..21950
                     /gene="hilA"
                     /locus_tag="MOX77_000791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator HilA"
                     /protein_id="HCA3356420.1"
                     /translation="MPHFNPVPVSNKKFVFDDFILNMDGSLLRSEKKVNIPPKEYAVL
                     VILLEAAGKIVSKNTLLDQVWGDAEVNEESLTRCIYALRRILSEDKEHRYIETLYGQG
                     YRFNRPVVVVSPPAPQPTTHTLAILPFQMQDQVQSESLHYSIVKGLSQYAPFGLSVLP
                     VTITKNCRSVKDILELMDQLRPDYYISGQMIPDGNDNIVQIEIVRVKGYHLLHQESIK
                     LIEHQPASLLQNKIANLLLRCIPGLRWDTKQISELNSIDSTMVYLRGKHELNQYTPYS
                     LQQALKLLTQCVNMSPNSIAPYCALAECYLSMAQMGIFDKQNAMIKAKEHAIKATELD
                     HNNPQALGLLGLINTIHSEYIVGSLLFKQANLLSPISADIKYYYGWNLFMAGQLEEAL
                     QTINECLKLDPTRAAAGITKLWITYYHTGIDDAIRLGDELRSQHLQDNPILLSMQVMF
                     LSLKGKHELARKLTKEISTQEITGLIAVNLLYAEYCQNSERALPTIREFLESEQRIDN
                     NPGLLPLVLVAHGEAIAEKMWNKFKNEDNIWFKRWKQDPRLIKLR"
     gene            21968..22450
                     /gene="iagB"
                     /locus_tag="MOX77_000792"
     CDS             21968..22450
                     /gene="iagB"
                     /locus_tag="MOX77_000792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-1 type III secretion system invasion protein
                     IagB"
                     /protein_id="HCA3356421.1"
                     /translation="MHYFFIIVIWLLSINTAWADCWLQAEKMFNIESELLYAIAQQES
                     AMKPGAIGHNRDGSTDLGLMQINSFHMKRLKKMGISEKQLLQDPCISVIVGASILSDM
                     MKIYGFSWEAVGAYNAGTSPKRSDIRKRYAKKIWENYRKLKEMSAEEKNKRLSIAVNK
                     "
     gene            complement(22504..24135)
                     /gene="sptP"
                     /locus_tag="MOX77_000793"
                     /pseudo
     CDS             complement(22504..24135)
                     /gene="sptP"
                     /locus_tag="MOX77_000793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461799.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-1 type III secretion system effector
                     GTPase-activating protein SptP"
     gene            complement(24122..24514)
                     /gene="sicP"
                     /locus_tag="MOX77_000794"
     CDS             complement(24122..24514)
                     /gene="sicP"
                     /locus_tag="MOX77_000794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperone SicP"
                     /protein_id="HCA3356422.1"
                     /translation="MQAHQDIIANIGEKLGLPLTFDDNNQCLLLLDSDIFTSIEAKDD
                     IWLLNGMIIPLSPVCGDSIWRQIMVINGELAANNEGTLAYIDAAETLLFIHAITDLTN
                     IYHIISQLESFVNKQEALKNILQEYAKV"
     gene            complement(24541..24801)
                     /locus_tag="MOX77_000795"
     CDS             complement(24541..24801)
                     /locus_tag="MOX77_000795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_449260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356423.1"
                     /translation="MKIITHVVPGSGMAAIYDDIADSSRFVIKGKLRHVENDPKELLI
                     CVPMRSEWLFYWIKGEKYCARRWARKNIKALCNQIKFEEAIL"
     gene            complement(24845..25093)
                     /locus_tag="MOX77_000796"
     CDS             complement(24845..25093)
                     /locus_tag="MOX77_000796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HCA3356424.1"
                     /translation="MNMDIEARVKKVITSCIAVDVDSINGQTHLVEDLYADSLDLIDI
                     VFGLSEEFDISCNENDLPDMTTFADICRVVKKSLESRV"
     gene            complement(25112..27169)
                     /gene="sipA"
                     /locus_tag="MOX77_000797"
     CDS             complement(25112..27169)
                     /gene="sipA"
                     /locus_tag="MOX77_000797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-1 type III secretion system effector SipA"
                     /protein_id="HCA3356425.1"
                     /translation="MVTSVRTQPPVIMPGMQTEIKTQATNLAANLSAVRESATATLSG
                     EIKGQQLEDFPALIKQASLDALFKCGKDAEALKEVFTNSNNVAGKKAIMEFAGLFRSA
                     LNATSDSPEAKTLLMKVGAEYTAQIIKDGLKEKSAFGPWLPETKKAEAKLENLEKQLL
                     DIIKNNTGGELSKLSTNLVMQEVMPYIASCIEHNFGCTLDPLTRSSLTQLVDKAAAKA
                     VEALDMCHQKLTQEQGTSVGREARHLEMQTLIPLLLRNVFAQIPADKLPDPKIPEPAA
                     GPVPDGGKKAEPTGINININIDSSNHSVDNSKHINNSRSHVDNSQRHIDNSNHDNSRK
                     TIDNSRTFIDNSQRHGESHHSTNSSNVSHSHSRVDSTTHQTETAHSASTGTIDHGIAG
                     KIDVTAHATAEAVTNSSSESKDGKVVTSEKGTTGETTSFDEVDGVTSKSIIGKPLQAT
                     VHGVDDNKQQSQTAEIVNVKPLASQLAGVENVKIDTLQSDSTVITGNKAGTTDNDNSQ
                     TDKTGPFSGLKFKQNSFLSTVPSVTNMHSIHFNAREAFLGVIRKALEPDASTPFPVRR
                     AFDGLRGEILPNDTIKSAALKAQCSDIDKHPELKAKMETLKEVITHHPQKEKLAEIAL
                     QFAREAGLTRQKGETDYVLSNVLDGLIGDGSWRAGPAYESYLNKPGVDRVITTVDGLH
                     MQR"
     gene            complement(27188..28210)
                     /gene="sipD"
                     /locus_tag="MOX77_000798"
     CDS             complement(27188..28210)
                     /gene="sipD"
                     /locus_tag="MOX77_000798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-1 type III secretion system needle tip
                     complex protein SipD"
                     /protein_id="HCA3356426.1"
                     /translation="MLNIQNYSASPHPGIVAERPQTPSASEHAEIAVVPSTTEHRGTD
                     IISLSQAATKIQQAQQTLQSTPPISEENNDERTLARQQLTSSLNALAKSGVSLSAEQN
                     ENLRSTFSAPTSALFSASPMAQPRTTISDAEIWDMVSQNISAIGDSYLGVYENVVAVY
                     TDFYQAFSDILSKMGGWLSPGKDGNTIKLNVDSLKSEISSLINKYTQINKNTILFPSQ
                     TGSGMTTATKAEAEQWIKELNLPDSCLKASGSGYVVLVDTGPLSKMVSDLNGIGSGSA
                     LELDNAKYQAWQSGFKAQEENLKTTLQTLTQKYSNANSLYDNLVKVLSSTISSSLETA
                     KSFLQG"
     gene            complement(28280..29509)
                     /gene="sipC"
                     /locus_tag="MOX77_000799"
     CDS             complement(28280..29509)
                     /gene="sipC"
                     /locus_tag="MOX77_000799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-1 type III secretion system needle tip
                     complex protein SipC"
                     /protein_id="HCA3356427.1"
                     /translation="MLISNVGINPAAYLNNHSVENSSQTASQSVSAKDILNSIGISSS
                     KVSDLGLSPTLSAPAPGVLTQTPGTITSFLKASIQNTDMNQDLNALANNVTTKANEVV
                     QTQLREQQAEVGKFFDISGMSSSAVALLAAANTLMLTLNQADSKLSGKLSLVSFDAAK
                     TTASSMMREGMNALSGSISQSALQLGITGVGAKLEYKGLQNERGALKHNAAKIDKLTT
                     ESHSIKNVLNGQNSVKLGAEGVDSLKSLNMKKTGTDATKNLNDATLKSNAGTSATESL
                     GIKNSNKQISPEHQAILSKRLESVESDIRLEQNTMDMTRIDARKMQMTGDLIMKNSVT
                     VGGIAGASRQYAATQERSEQQISQVNNRVASTASDEARESSRKSTSLIQEMLKTMESI
                     NQSKASALAAIAGNIRA"
     gene            complement(29537..31318)
                     /gene="sipB"
                     /locus_tag="MOX77_000800"
     CDS             complement(29537..31318)
                     /gene="sipB"
                     /locus_tag="MOX77_000800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-1 type III secretion system needle tip
                     complex protein SipB"
                     /protein_id="HCA3356428.1"
                     /translation="MVNDASSISRSGYTQNPRLAEAAFEGVRKNTDFLKAADKAFKDV
                     VATKAGDLKAGTKSGESAINTVGLKPPTDAAREKLSSEGQLTLLLGKLMTLLGDVSLS
                     QLESRLAVWQAMIESQKEMGIQVSKEFQTALGEAQEATDLYEASIKKTDTAKSVYDAA
                     AKKLTQAQNKLQSLDPADPGYAQAEAAVEQAGKEATEAKEALDKATDATVKAGTDAKA
                     KAEKADNILTKFQGTANAASQNQVSQGEQDNLSNVARLTMLMAMFIEIVGKNTEESLQ
                     NDLALFNALQEGRQAEMEKKSAEFQEETRKAEETNRIMGCIGKVLGALLTIVSVVAAV
                     FTGGASLALAAVGLAVMVADEIVKAATGVSFIQQALNPIMEHVLKPLMELIGKAITKA
                     LEGLGVDKKTAEMAGSIVGAIVAAIAMVAVIVVVAVVGKGAAAKLGNALSKMMGETIK
                     KLVPNVLKQLAQNGSKLFTQGMQRITSGLGNVGSKMGLQTNALSKELVGNTLNKVALG
                     MEVTNTAAQSAGGVAEGVFIKNASEALADFMLARFAMDQIQQWLKQSVEIFGENQKVT
                     AELQKAMSSAVQQNADASRFILRQSRA"
     gene            complement(31321..31818)
                     /gene="sicA"
                     /locus_tag="MOX77_000801"
     CDS             complement(31321..31818)
                     /gene="sicA"
                     /locus_tag="MOX77_000801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SycD/LcrH family type III secretion system
                     chaperone SicA"
                     /protein_id="HCA3356429.1"
                     /translation="MDYQNNVSEERVAEMIWDAVSEGATLKDVHGIPQDMMDGLYAHA
                     YEFYNQGRLDEAETFFRFLCIYDFYNPDYTMGLAAVCQLKKQFQKACDLYAVAFTLLK
                     NDYRPVFFTGQCQLLMRKAAKARQCFELVNERTEDESLRAKALVYLEALKTAETEQHS
                     EQEKE"
     gene            complement(31956..33026)
                     /gene="spaS"
                     /locus_tag="MOX77_000802"
     CDS             complement(31956..33026)
                     /gene="spaS"
                     /locus_tag="MOX77_000802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-1 type III secretion system export apparatus
                     protein SpaS"
                     /protein_id="HCA3356430.1"
                     /translation="MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVS
                     YGSFNEFMGIIKIIIADNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAG
                     FVLATEALKPNLSALNPVEGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEI
                     FSQLNGNVVDIAVIWRELLLALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKR
                     EMKEQEGNPEVKSKRREVHMEILSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIP
                     MISVYETNQRALAVRAYAEKVGVPVIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLV
                     WLEEVENAGKDVIQPQENEVRH"
     gene            complement(33013..33804)
                     /gene="spaR"
                     /locus_tag="MOX77_000803"
     CDS             complement(33013..33804)
                     /gene="spaR"
                     /locus_tag="MOX77_000803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-1 type III secretion system export apparatus
                     protein SpaR"
                     /protein_id="HCA3356431.1"
                     /translation="MLYALYFEIHHLVASAALGFARVAPIFFFLPFLNSGVLSGAPRN
                     AIIILVALGVWPHALNEAPPFLSVAMIPLVLQEAAVGVMLGCLLSWPFWVMHALGCII
                     DNQRGATLSSSIDPANGIDTSEMANFLNMFAAVVYLQNGGLVTMVDVLNKSYQLCDPM
                     NECTPSLPPLLTFINQVAQNALVLASPVVLVLLLSEVFLGLLSRFAPQMNAFAISLTV
                     KSGIAVLIMLLYFSPVLPDNVPRLSFQATGLSSWFYERGATHVLE"
     gene            complement(33808..34068)
                     /gene="spaQ"
                     /locus_tag="MOX77_000804"
     CDS             complement(33808..34068)
                     /gene="spaQ"
                     /locus_tag="MOX77_000804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-1 type III secretion system export apparatus
                     protein SpaQ"
                     /protein_id="HCA3356432.1"
                     /translation="MDDLVFAGNKALYLVLILSGWPTIVATIIGLLVGLFQTVTQLQE
                     QTLPFGIKLLGVCLCLFLLSGWYGEVLLSYGRQVIFLALAKG"
     gene            complement(34094..34768)
                     /gene="spaP"
                     /locus_tag="MOX77_000805"
     CDS             complement(34094..34768)
                     /gene="spaP"
                     /locus_tag="MOX77_000805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-1 type III secretion system export apparatus
                     protein SpaP"
                     /protein_id="HCA3356433.1"
                     /translation="MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQ
                     QIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDY
                     LIKYSDRELVQFFENAQLKRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFK
                     IGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQ
                     YMDIAT"
     gene            complement(34758..35669)
                     /gene="spaO"
                     /locus_tag="MOX77_000806"
     CDS             complement(34758..35669)
                     /gene="spaO"
                     /locus_tag="MOX77_000806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-1 type III secretion system protein SpaO"
                     /protein_id="HCA3356434.1"
                     /translation="MSLRVRQIDRREWLLAQTATECQRHGREATLEYPTRQGMWVRLS
                     DAEKRWSAWIKPGGWLEHVSPALAGAAVSAGAEHLVVPWLAATERPFELPVPHLSCRR
                     LCVENPVPGSALPEGKLLHIMSDRGGLWFEHLPELPAVGGGRPKMLRWPLRFVIGSSD
                     TQRSLLGRIGIGDVLLIRTSRAEVYCYAKKLGHFNRVEGGIIVETLDIQHIEEENNTT
                     ETAETLPGLNQLPVKLEFVLYRKNVTLAELEAMGQQQLLSLPTNVELNVEIMANGVLL
                     GNGELVQMNDTLGVEIHEWLSESGNGE"
     gene            complement(35669..36679)
                     /gene="spaN"
                     /locus_tag="MOX77_000807"
     CDS             complement(35669..36679)
                     /gene="spaN"
                     /locus_tag="MOX77_000807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-1 type III secretion system protein SpaN"
                     /protein_id="HCA3356435.1"
                     /translation="MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKK
                     DRDYGDAFVMHKETALPVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKV
                     TAEKSVGLISAEAKVDKSAALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGIS
                     DDNIKALPGDNKAIAGEGVRKEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLP
                     LQPTTIADLSQLTGGDEKMPLAAQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSV
                     NIQARQAGEFSLIPSNTQVEHRLHDQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEED
                     DA"
     gene            complement(36679..37122)
                     /gene="spaM"
                     /locus_tag="MOX77_000808"
     CDS             complement(36679..37122)
                     /gene="spaM"
                     /locus_tag="MOX77_000808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-1 type III secretion system protein SpaM"
                     /protein_id="HCA3356436.1"
                     /translation="MHSLTRIKVLQRRCTVFHSQCESILLRYQDEDRGLQAEEEAILE
                     QIAGLKLLLDTLRAENRQLSREEIYTLLRKQSIVRRQIKDLELQIIQIQEKRSELEKK
                     REEFQKKSKYWLRKEGNYQRWIIRQKRHYIQREIQQEEAESEEII"
     gene            complement(37100..38395)
                     /gene="invC"
                     /locus_tag="MOX77_000809"
     CDS             complement(37100..38395)
                     /gene="invC"
                     /locus_tag="MOX77_000809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SctN family type III secretion system ATPase
                     InvC"
                     /protein_id="HCA3356437.1"
                     /translation="MKTPRLLQYLAYPQKITGPIIEAELRDVAIGELCEIRRGWHQKQ
                     VVARAQVVGLQRERTVLSLIGNAQGLSRDVVLYPTGRALSAWVGYSVLGAVLDPTGKI
                     VERFTPEVAPISEERVIDVAPPSYASRVGVREPLITGVRAIDGLLTCGVGQRMGIFAS
                     AGCGKTMLMHMLIEQTEADVFVIGLIGERGREVTEFVDMLRASHKKEKCVLVFATSDF
                     PSVDRCNAAQLATTVAEYFRDQGKRVVLFIDSMTRYARALRDVALASGERPARRGYPA
                     SVFDNLPRLLERPGATSEGSITAFYTVLLESEEEADPMADEIRSILDGHLYLSRKLAG
                     QGHYPAIDVLKSVSRVFGQVTTPTHAEQASAVRKLMTRLEELQLFIDLGEYRPGENID
                     NDRAMQMRDSLKAWLCQPVAQYSSFDDTLSGMNAFADQN"
     gene            complement(38392..38799)
                     /gene="spaK"
                     /locus_tag="MOX77_000810"
     CDS             complement(38392..38799)
                     /gene="spaK"
                     /locus_tag="MOX77_000810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-1 type III secretion system chaperone SpaK"
                     /protein_id="HCA3356438.1"
                     /translation="MQHLDIAELVRSALEVSGCDPSLIGGIDSHSTIVLDLFALPSIC
                     ISVKDDDVWIWAQLGADSMVVLQQRAYEILMTIMEGCHFARGGQLLLGEQNGELTLKA
                     LVHPDFLSDGEKFSTALNGFYNYLEVFSRSLMR"
     gene            complement(38823..40880)
                     /gene="invA"
                     /locus_tag="MOX77_000811"
     CDS             complement(38823..40880)
                     /gene="invA"
                     /locus_tag="MOX77_000811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system export apparatus
                     protein InvA"
                     /protein_id="HCA3356439.1"
                     /translation="MLLSLLNSARLRPELLILVLMVMIISMFVIPLPTYLVDFLIALN
                     IVLAILVFMGSFYIDRILSFSTFPAVLLITTLFRLALSISTSRLILIEADAGEIIATF
                     GQFVIGDSLAVGFVVFSIVTVVQFIVITKGSERVAEVAARFSLDGMPGKQMSIDADLK
                     AGIIDADAARERRSVLERESQLYGSFDGAMKFIKGDAIAGIIIIFVNFIGGISVGMTR
                     HGMDLSSALSTYTMLTIGDGLVAQIPALLIAISAGFIVTRVNGDSDNMGRNIMTQLLN
                     NPFVLVVTAILTISMGTLPGFPLPVFVILSVVLSVLFYFKFREAKRSAAKPKTSKGEQ
                     PLSIEEKEGSSLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQLAERLRSQFFIDYG
                     VRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVSFGINPTIHQ
                     QGSSQYFWVTHEEGEKLRELGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHMLDQ
                     LEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALALWAPREKDVINL
                     VEHIRGAMARYICHKFANGGELRAVMVSAEVEDVIRKGIRQTSGSTFLSLDPEASANL
                     MDLITLKLDDLLIAHKDLVLLTSVDVRRFIKKMIEGRFPDLEVLSFGEIADSKSVNVI
                     KTI"
     gene            complement(40905..42023)
                     /gene="invE"
                     /locus_tag="MOX77_000812"
     CDS             complement(40905..42023)
                     /gene="invE"
                     /locus_tag="MOX77_000812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system gatekeeper InvE"
                     /protein_id="HCA3356440.1"
                     /translation="MIPGSTSGISFSRILSRQASHQDATQHTDAQQAEIQQAAEDSSP
                     GAEVQKFVQSTDEMSAALAQFRNRRDYEKKSSNLSNSFERVLEDEALPKAKQILKLIS
                     VHGGALEDFLRQARSLFPDPSDLVLVLRELLRRKDLEEIVRKKLESLLKHVEEQTDPK
                     TLKAGINCALKARLFGKTLSLKPGLLRASYRQFIQSESHEVEIYSDWIASYGYQRRLV
                     VLDFIEGSLLTDIDANDASCSRLEFGQLLRRLTQLKMLRSADLLFVSTLLSYSFTKAF
                     NAEESSWLLLMLSLLQQPHEVDSLLADIIGLNALLLSHKEHASFLQIFYQVCKAIPSS
                     LFYEEYWQEELLMALRSMTDIAYKHEMAEQRRTIEKLS"
     gene            complement(42020..43708)
                     /gene="invG"
                     /locus_tag="MOX77_000813"
     CDS             complement(42020..43708)
                     /gene="invG"
                     /locus_tag="MOX77_000813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system outer membrane ring
                     protein InvG"
                     /protein_id="HCA3356441.1"
                     /translation="MKTHILLARVLACAALVLVAPGYSSEKIPVTGSGFVAKDDSLRT
                     FFDAMALQLKEPVIVSKMAARKKITGNFEFHDPNALLEKLSLQLGLIWYFDGQAIYIY
                     DASEMRNAVVSLRNVSLNEFNNFLKRSGLYNKNYPLRGDNRKGTFYVSGPPVYVDMVV
                     NAATMMDKQNDGIELGRQKIGVMRLNNTFVGDRTYNLRDQKMVIPGIATAIERLLQGE
                     EQPLGNIVSSEPPAMPAFSANGEKGKAANYAGGMSLQEALKQNAAAGNIKIVAYPDTN
                     SLLVKGTAGQVHFIEMLVKALDVAKRHVELSLWIVDLNKSDLERLGTSWSGSITIGDK
                     LGVSLNQSSISTLDGSRFIAAVNALEEKKQATVVSRPVLLTQENVPAIFDNNRTFYTK
                     LIGERNVALEHVTYGTMIRVLPRFSADGQIEMSLDIEDGNDKTPQSDTTTSVDALPEV
                     GRTLISTIARVPHGKSLLVGGYTRDANTDTVQSIPVLGKLPLIGSLFRYSSKNKSNVV
                     RVFMIEPKEIVDPLTPDASESVNNILKQSGAWSGDDKLQKWVRVYLDRGQEVIK"
     gene            complement(43705..44355)
                     /gene="invF"
                     /locus_tag="MOX77_000814"
     CDS             complement(43705..44355)
                     /gene="invF"
                     /locus_tag="MOX77_000814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system transcriptional
                     activator InvF"
                     /protein_id="HCA3356442.1"
                     /translation="MSFSESRHNENCLIQEGALLFCEQAVVAPVSGDLVFRPLKIEVL
                     SKLLAFIDGAGLVDTTYAESDKWVLLSPEFRAIWQDRKRCEYWFLQQIITPSPAFNKV
                     LALLRKSESYWLVGYLLAQSTSGNTMRMLGEDYGVSYTHFRRLCSRALGGKAKSELRN
                     WRMAQSLLNSVEGHENITQLAVNHGYSSPSHFSSEIKELIGVSPRKLSNIIQLADK"
     gene            44811..45254
                     /gene="invH"
                     /locus_tag="MOX77_000815"
     CDS             44811..45254
                     /gene="invH"
                     /locus_tag="MOX77_000815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-1 type III secretion system invasion
                     lipoprotein InvH"
                     /protein_id="HCA3356443.1"
                     /translation="MKKFYSCLPVFLLIGCAQVPLPSSVSKPVQQPGAQKEQLANANS
                     IDECQSLPYVPSDLAKNKSLSNQNADNSASKNSAISSSIFCEKYKQTKEQALTFFQEH
                     PQYMRSKEDEEQLMTEFKKVLLEPGSKNLSIYQTLLAAHERLQAL"
     gene            45658..45858
                     /locus_tag="MOX77_000816"
                     /pseudo
     CDS             45658..45858
                     /locus_tag="MOX77_000816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477168.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            46128..46418
                     /locus_tag="MOX77_000817"
     CDS             46128..46418
                     /locus_tag="MOX77_000817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1778 domain-containing protein"
                     /protein_id="HCA3356444.1"
                     /translation="MKTMPQIAIESNERLSLRVSTDAKKLIVRAAAIQQTNLTDFVVS
                     NVLPVAQKIVDAAERVYLTERDTQMIMEILDNPPAPNEKLLAAAFALPDMKK"
     gene            46415..46942
                     /locus_tag="MOX77_000818"
     CDS             46415..46942
                     /locus_tag="MOX77_000818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HCA3356445.1"
                     /translation="MMFTDWHEAAIGKTHNRMNFDCGDADLNQFLQRHARQNHEKGTT
                     KTYVALDNSDVTRIHGFYSVSPASLIYAQVPGAISKGLGRYDVPVFRLGRLAVDKSMQ
                     GQGLGAQLLLSAGKRCIQAALQVGGVALLIDAKNKQVCDWYKGFGAVPLNDQPLSLLL
                     SFKTLYAALSASGRL"
     gene            complement(47015..47436)
                     /locus_tag="MOX77_000819"
                     /pseudo
     CDS             complement(47015..47436)
                     /locus_tag="MOX77_000819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_025243904.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            47663..48319
                     /gene="pphB"
                     /locus_tag="MOX77_000820"
     CDS             47663..48319
                     /gene="pphB"
                     /locus_tag="MOX77_000820"
                     /EC_number="3.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-serine/threonine phosphatase"
                     /protein_id="HCA3356446.1"
                     /translation="MELIRYADINSVLYRHIWVVGDIHGCYSLLLTRLAQLNFSPDTD
                     LLISTGDNIDRGKENLETLRLLNTSWFISVVGNHEAMALDAFETQDGNFWYVNGGYWY
                     DSVTQKDRQEATELLLTFKQRPHIIEVKTSSKKYVIAHADYPDDSYDYGKQVDIDSVL
                     WSRDRLLSSLQGNIHPIRGADTFIFGHMIVDYTTTFANQIYIDTGSFCSGNLSFFKIK
                     "
     gene            complement(48489..49009)
                     /locus_tag="MOX77_000821"
                     /pseudo
     CDS             complement(48489..49009)
                     /locus_tag="MOX77_000821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461829.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cytoplasmic protein"
     gene            49167..>50199
                     /locus_tag="MOX77_000822"
     CDS             49167..>50199
                     /locus_tag="MOX77_000822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461830.1"
                     /note="This protein performs the mismatch recognition step
                     during the DNA repair process; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HCA3356447.1"
                     /translation="MNESFDKDFSNHTPMMQQYLKLKAQHPEILLFYRMGDFYELFYD
                     DAKRASQLLDISLTKRGASAGEPIPMAGIPHHAVENYLAKLVNQGESVAICEQIGDPA
                     TSKGPVERKVVRIVTPGTISDEALLQERQDNLLAAIWQDGKGYGYATLDISSGRFRLS
                     EPADRETMAAELQRTNPAELLYAEDFAEMALIEGRRGLRRRPLWEFEIDTARQQLNLQ
                     FGTRDLVGFGVENASRGLCAAGCLLQYVKDTQRTSLPHIRSITMERQQDSIIMDAATR
                     RNLEITQNLAGGVENTLAAVLDCTVTPMGSRMLKRWLHMPVRNTDILRERQQTIGALQ
                     DTVSELQPVL"
BASE COUNT        13032 a        12623 c        11097 g        13447 t
ORIGIN      
        1 ctcaatagcg ccaaacggac aggcaatacc gcacagtttg cagctcacgc acaggctttc
       61 attaagctgg acagcgccgt caacgcgatt aatcgcgtta accgggcata ccgtggcgca
      121 tggcgcatct tcacagtggt gacagagctg cggcgcagat tctttttcat tcagcatcac
      181 tttcaggcgc ggcattgact gcaggccatg ctggcgatgc gtctctgaac aggcggcctc
      241 acaggtgtgg cagccgatac agagagtgga gtcagcaatt acaaaacgat tcaccaggca
      301 ttcctcaggt gattgtcatt tttgacgaaa acatgccgtt gaaatgtcat tttcgacact
      361 tatcgacacg cccatcccca aaacattcat gacatggcgc aacgccacat cgcgaatcaa
      421 agcgggcaac gcctcaggct tatacagccg ggctgtgtcc ctttaccaat tggcgcaaat
      481 taaccggcga gttggtttct acagcggtat agaggctgtc gtaaacgctg gcgatttttt
      541 ccagatagtg ctccagcacc tgctcgcgat cgcggttgtt aacccgttcg tcaaccttgc
      601 cgtcgatatc gagctgcgcc tgtgcaatca attgcttatc ttcgccatct ttggtttcaa
      661 cgtagtactc aatggtgtgg ctgttaaaac catccgccaa cgcaacgtaa atacgaaagt
      721 gctcaaacag gacaaagcaa agatcccttt ccggcgcgca gctcattgcg tgatgcaggc
      781 gcgctttcga gagggtgatc ccctgaacca gcgagttgca gtaaatatgc cactggtcct
      841 gtaggcgacg atgccgttgc gcgatgtaat cggccttttc gcttatttcc caaatagtca
      901 tgtcaggtta cccgtttaac agagatgcct gcgttaagca ttttccatgc caatttttaa
      961 cttattgttt ttaatggaag acgcgcacag ttactgccgt ttcgacgcgg tgacgacatg
     1021 tcatttcgtc atcgtcgaca ttaacctgcc aggggataca aatattggca taaatattgc
     1081 tttacagggg caaccactac gggaggcgat atgcacgaaa tcaccctctg ccaacgggca
     1141 ctggaattga ttgaacaaca ggcttcagca tacggtgcaa aacgtgtgac agccgtctgg
     1201 atcaaaattg gcgcattttc ttgcgtggaa accagcgctc tttccttttg ttttgatctg
     1261 gtatgccgcg gcacgatagc agaaggttgt aaactgcacc tcgaagaaca ggaagccgaa
     1321 tgctggtgtg agcattgtca acaatatgtc acgttgttaa cccaccgtgt acgtcgttgt
     1381 ccgcaatgtc atagcgatac gctgcgaatt gtggccgatg acggcttaca aattcggcgc
     1441 atagagattg atgaaactga agattaatgc cggataagac gctcgcgtcg ccatccggca
     1501 gaaagcctgt aacaagaaga agatcaggag taagcgatgt gtacgacttg cggttgcgct
     1561 gaaggcaacc tttatataga aggcgatgaa cataatccgc actcagcgtt tcgtagcgcg
     1621 ccctttgccc cagcggctcg cccggcgctg aatattaccg gcattaaaac gcctgacttt
     1681 accccaagtc agaccgcaga aggcgatctg cattacggcc acggcgaagc cggaacccac
     1741 gcgcctggta tgagtcagcg gcggatgctg gaggttgaaa tcgacgtgct ggacaaaaat
     1801 aatcgtctgg ctgagcgcaa ccgcgcccgt ttcgccgccc gccagcaact ggtgctcaac
     1861 ctggtgtcca gccccgggtc cggtaaaacc actctgctga ccgaaacgct gatgaaattg
     1921 aaagaccgtg taccgtgcgc ggtgattgaa ggcgaccagc agacagtgaa cgacgccgcc
     1981 cgcatccgcg ctaccggcac gcccgccatt caggtcaaca ccggtaaagg ctgccatctt
     2041 gacgcgcaaa tgatcgccga cgccgcgccg cgcctgccgc tggatgacca cggtattctg
     2101 tttatcgaaa acgtcggaaa tcttgtctgc ccggccagct tcgatctggg cgaaaagcat
     2161 aaagtcgcag tgctttccgt gaccgaaggt gaagataagc cgctgaagta tccccatatg
     2221 tttgccgcgg cgtcgctcat gctgctcaat aaagtcgatc tgctgcccta cctcaatttt
     2281 gacgttgaga agtgcatcgc cagcgcgcgt gaagtgaacc cggagattga aattatcctg
     2341 atttccgcca ccagcggcga aggcatggat cagtggctgg cctggctgga ggcgcagcga
     2401 tgtgcatagg cgttccgggt caaatccgcg ccattgacgg caatcaggca aaagttgacg
     2461 tctgcggcat tcagcgcgac gtcgatctca cattagtcgg cagttgtgat gaaaacggtc
     2521 agccgcgtct gggtcagtgg gtgctggttc atgtcggatt cgccatgagc gtcattaacg
     2581 aagcggaagc gcgcgacacg ctcgacgcgc tacaaaatat gtttgatgtt gagccggacg
     2641 tcggcgcact gctgtatggt gaggagagat aatgcgtttt gttgacgagt accgtgcgcc
     2701 ggaacaggta atgcagctca ttgaacacct gcgtgaacgc gccgcccttc ttccttacac
     2761 tgctgaacga ccgctgcgca ttatggaagt ctgcgggggt catacccacg cgatttttaa
     2821 atttggtctc gatcagttac tgcccgaaaa cgtggagttt attcacggcc ccggttgtcc
     2881 ggtctgcgtg ctgccaatgg gacgcatcga cagttgcgtg gaaatcgcca gccatccgga
     2941 ggtgattttc tgcacctttg gcgatgccat gcgcgtgccg gggaaacagg gttctctgtt
     3001 gcaggctaaa gcgcgcggcg cggatgtgcg tattgtttat tctccgatgg acgcgctgaa
     3061 gctggcgcag gataacccga cccgcaaagt ggtatttttc gggctgggct ttgaaaccac
     3121 catgccgacc accgccatca cgctacagca ggcaaaacag cgtgacgtgc gaaacttcta
     3181 ctttttctgc cagcacatta cactgatccc gacgctgcgt agcctactgg agcagccgga
     3241 caacggcatt gacgcctttc ttgcgccagg ccacgtcagc atggtcatcg gcaccgaggc
     3301 gtaccagttt atcgccgccg attttcatcg cccgctggtg gtggctggat tcgaaccgct
     3361 tgatctactg caaggcgtgg tcatgctggt tgagcagaaa atagcggccc taagccaggt
     3421 tgaaaaccaa taccgtcgcg tggtgccgga tgccggaaac atgctggcgc agcaggccat
     3481 cgccgatgtg ttctgcgtta atggcgacag cgagtggcgc ggcctgggcg tgattgaatc
     3541 ctccggcgtc cacctgacgc cggagtatca gcgctttgac gccgaagcgc atttccgccc
     3601 agcgccacag caggtctatg acgatccgcg cgcccgctgc ggcgaagtgc tgaccggcag
     3661 atgcaagccg catcagtgcc cgctatttgg taaaacatgt aatccagaga ccgcgttcgg
     3721 cgcgctgatg gtctcttccg aaggcgcatg cgccgcctgg tatcagtatc gtcagcagga
     3781 gtgtgaagtt tgaacaatat acaactcgcc cacggcagcg gcggccaggc tatgcaacag
     3841 ttgattaata gcctgtttat ggaggccttt gccaacccgt ggctggcgga acaagaagat
     3901 caggcgcgtc tggagctggc gcaactgacg gcggagggcg accgtctggc gttttctacc
     3961 gatagctatg tgatcgatcc gctctttttc cccggcggca atatcggcaa actggcgatt
     4021 tgcggtacgg cgaacgacgt tgcggtgagc ggcgcgatcc cccgctatct ctcctgcggc
     4081 tttatccttg aagaagggct gccgatggag acgttaaaaa gcgtggtcaa tagcatggcg
     4141 gcgaccgcac gggaagcggg tatcgccatt gtaaccggcg acaccaaagt tgtgcagcgc
     4201 ggcgcggcgg ataaattgtt tatcaacact gccggcatgg gggcgattcc cgccgatatt
     4261 cactggggcg cgcaaacgct gagcgttggc gatgtgctgt tagtcagcgg tacgcttggc
     4321 gatcacggcg ccactatcct caacctgcgt gagcaactgg gactggatgg cgagctggcg
     4381 agcgactgcg cagtattaac gccgcttatt cagacgttgc gtcatattga cggagtgaag
     4441 gcattgcgtg acgccacgcg cggcggcgtg aatgcggtcg cccatgagtt tgcggcgtcc
     4501 tgcggttacg gtattgaatt gtccgaatcc gcactgccgc tcaaacctgc cgtgcgcggc
     4561 gtctgcgagc tgttggggct ggatgccctg aactttgcca acgaaggaaa actggtgatt
     4621 gccgttgaac ggcaggccgc agatcgggcg ttggcggcat tacgcgcgca tccgctggga
     4681 cgtgatgcgg cgctgattgg cgaagtcgtg gaacgcaaag gcgttcgctt agccggactc
     4741 tatggcgtga agcgaaccct tgatttgcca cacgccgaac cattacctcg tatatgctag
     4801 cagcctgttg gcagcatact gtaggccgga taagacgcat ttgcggcgag atccggcatt
     4861 aacgctgcat taacgcctga tggcgctttg cttatcaggc ctacggagtg tgtgaccagc
     4921 gagtttgcgg tcagccatcc ggcaataact tacgacttat acctataatt catttaccgt
     4981 tttcgcaccg ttttgcggta ttttcctgga aaagcaacat gtcgtataca cccatgagcg
     5041 atcttggaca gcaaggcttg ttcgatatca ctcgtacctt attgcagcag cccgatttgg
     5101 cgtcgctcag tgaagcgctt tcgcaactgg taaagcgttc agcgctcgcc gacagcgccg
     5161 gcattgtgct atggcaggcg cagtcgcaac gcgcacaata ttatgcgacg cgagaaaatg
     5221 gccgtcctgt tgaatatgaa gatgaaaccg tactggcgca cggcccggta cgtcgcatcc
     5281 tttctcgccc cgatgcattg cactgtaatt tccatgagtt taccgaaacc tggccgcagc
     5341 ttgccgcgag cggcctctac cctgaatttg gtcattactg tctgcttcct ttagccgcgg
     5401 agggccgtat tttcggcggc tgcgaattca tccgtcagga agatcgcccc tggagtgaaa
     5461 aggaatatga ccgtctgcat acgtttaccc aaattgtcgg cgtggtcgcc gagcaaattc
     5521 aaaaccgggt aaacaataat gtcgattatg atctgttgtg ccgcgaacgc gataacttcc
     5581 gtattctggt tgcgattacc aacgccgtcc tgtcgcgtct ggatattaat gagctggtaa
     5641 gcgaagtcgc aaaagagatc caccactatt tcaatatcga cgcgatcagc atcgtgttgc
     5701 gcagccatcg caaaaataag ctgaatatct actccactca ctaccttgat gagcatcatc
     5761 cggcgcacga acagagcgaa gtcgacgaag ccggcacgct cacggagcgc gtctttaaaa
     5821 gtaaagagat gctgcttatc aacctcaacg aacgcgatcc gcttgccccc tacgaacgaa
     5881 tgctgttcga tacctggggc aatcagatcc agacgctttg cctgctgccg ttgatgtccg
     5941 gcaagacgat gcttggcgtg ctcaaactgg cccagtgcga agaaaaagtg tttaccaccg
     6001 ccaacctcaa gctgctacgt cagattgccg aacgggtagc cattgccgtg gataatgcgc
     6061 tggcctatca ggaaatccac cgtctgaagg aacgcctggt cgacgaaaat ctggcgctca
     6121 cggagcagct taataacgtc gacagcgagt ttggcgagat catcgggcgc agcgaagcga
     6181 tgtacaacgt gctaaagcag gttgagatgg tggcgcagag cgacagtacc gtgctgattc
     6241 tgggcgaaac gggaaccagt aaagagttga ttgcccgcgc cattcacaac ctgagcggac
     6301 gtagcgggcg cagaatggta aagatgaact gcgccgcgat gccggcgggg ctgctggaaa
     6361 gcgatctgtt tggtcatgag cgcggcgcgt ttaccggcgc cagcgcgcag cggattggcc
     6421 gtttcgagct ggcggataaa agctcgctgt ttctggatga agtgggcgac atgccgctgg
     6481 agctacagcc taagctgctg cgcgtccttc aggagcaaga gtttgaacgt ctcggcagca
     6541 ataaactgat ccagaccgac gtgcggctga tcgccgcgac taaccgcgat ctgaaaaaaa
     6601 tggtcgccga tcgcgaattc cataacgatc tctactatcg gctgaatgtt tttccgattc
     6661 agcttcctcc gttacgcgaa cgtccggaag atattccact gctggtcaaa gcgtttacct
     6721 tcaaaatcgc ccgccgaatg gggcgtaata tcgacagcat tcccgccgaa acgctgcgca
     6781 cgctcagcgg tatggaatgg ccggggaacg ttcgcgaact ggagaatgtc gtcgagcgcg
     6841 ccgtgctgct gacgcgcggc aatgtgctac aactgtcgct gccggatatg actgccgtaa
     6901 cgcccgatac ctcgcctgtt gcgactgaaa gcgccaaaga aggcgaagat gaatatcagc
     6961 ttattatacg cgtgctgaaa gagaccaatg gcgtagtggc tggaccaaaa ggcgcggcgc
     7021 agcgtctggg gcttaaacga acccccctgc tgtcgcgtat gaagcgattg ggtattgata
     7081 aagacgcgtt agcgtaacgg gttgccggat ctgatccggc ctggagatga tgcgcgccgt
     7141 aggcctggcg cttccccttc acttcttgcg ctgatatttt tccggcaatt ctggaacggg
     7201 gcgcttatcg tcgataaggt gccgcacggt caggacagga tgccgccaaa gcattcgcgg
     7261 acctgcccaa cgcataatct gcttcatctc ctcgcgttta gccggctgat agcagtgcac
     7321 cgggcactgc ttacaggcgg gtttttcctc gccaaatacg catttatcaa gacgtttttg
     7381 cgcgtaggcg aacagcgcgt cgtaatgccc ctgcaccgct gacgcctgtg gacactggct
     7441 ttcatacagc gcgatcattt ttttgatcgt cagtttttca cgagcgatac gtttaccagg
     7501 catcgtgctc tctccgaaca ttaagatgca tttattttac accttatccc tctttagcac
     7561 tatcactgca tatcgtcgcc attacgcaaa taagaattat tttcatttat tcatgccttg
     7621 tgctatataa catagcaaag gctatattcg atgattaatt aaccacattg ttgcgaggga
     7681 tactatgacg aatctacatc gtctaaaaac actcctgatt gccggtattg tcgcgatact
     7741 cgcgctatcg ccagcctatg caaaagagaa atttaaagtc atcaccacgt ttaccgttat
     7801 tgccgacatg gcgaaaaacg tggcgggcga cgcagcggaa gtcagctcga ttaccaagcc
     7861 cggcgctgaa atccatgagt atcagccaac gcccggcgat attaaacgag cgcagggggc
     7921 acagcttatc ctcgcgaatg gtctgaacct ggagcgatgg ttcgcccgct tttatcagca
     7981 cctttccggt gtaccggaag tcgtcgtctc caccggcgtc aaaccgatgg gcattaccga
     8041 aggcccgtat aacggtaaac cgaacccgca cgcctggatg tcggcagaaa acgcgctgat
     8101 ttatgtcgat aacattcgcg acgccctggt gaagtacgat ccggataatg cgcagatcta
     8161 taagcaaaat gccgaacgct ataaagcgaa aattcgccag atggccgatc cgttgcgtgc
     8221 cgagctggaa aaaattcccg ccgatcagcg ctggctggtc accagtgaag gcgcgttctc
     8281 ttacctggcg cgcgataacg acatgaaaga gctttatctc tggccaatta acgccgatca
     8341 acaggggacg ccaaaacagg tgcgtaaagt gattgatacc attaaaaagc accatattcc
     8401 cgccatcttt agcgagagta cggtttccga taaacccgcc cgccaggtcg cgcgtgaatc
     8461 cggcgcgcat tatggcggcg tactgtatgt cgattctctg agcgccgctg acggccctgt
     8521 gccaacctat ctggatctgc tgcgcgtcac gaccgaaacc atcgtcaacg gcattaacga
     8581 cggactgagg agtcaacaat gagtcaatct gcgattaccg ttgatcaagt cacggtgacg
     8641 tatcgcaacg gtcataccgc cctacgggac gctacttttc aggtgcctgg cggttcaatc
     8701 gccgcgctgg taggcgtaaa tggttccggt aagtctacgt tatttaaagc gttaatgggc
     8761 tttgtgcatc ttgcgcgggg cgatatcact atcctgcaac agtcagtcaa ccaggcgctg
     8821 aaaaaaaacc tcattgctta tgttccacaa tcggaagaag tggactggtc atttccggta
     8881 ctggtagaag atgtggtgat gatgggacgc tacggtcata tgggctggct acgccgtccc
     8941 acagcgcatg atcacgcctg tgttgacgcc gcgctggcgc gggtggatat gcaggaatat
     9001 cgtcacaggc agattggcga gctgtccggc gggcagaaaa aacgtgtgtt tcttgccagg
     9061 gccatcgctc aggatggaca ggtaatcctg ctggatgaac cttttaccgg cgtggatgta
     9121 aaaaccgaag cgcgaatcat cgatctactg cgggaactgc gcgatgaagg ccgcacgatg
     9181 ctggtctcaa cgcataatct cggctccgtc accgaatttt gcgactatac ggtaatgatt
     9241 aaaggaaccg tactggccag cggccctacc gaaaccacgt ttaccgccgc gaatctggaa
     9301 ctggcgttta gcggcgttct acgtcatatc gcgctaagcg gaggtgaaga gcacatcatc
     9361 accgatgacg agcgcccctt tatttcccga cgcgtggcca gcggaggaaa atcgtcatga
     9421 actggcttgt tgagccgttt ggctaccagt atatgctcaa cgcgatgtgg gtctccgcga
     9481 tggtgggcgg tctttgcgcg tttctctcct gctatttgat gctcaaaggc tggtcgctca
     9541 ttggcgatgc gctatctcac tctattgtgc ctggcgtcgc tggcgcctgg atgttagggc
     9601 tgcccttctc gctcggcgcg tttctttccg gcggactggc ggcaggcagt atgctctttc
     9661 ttaaccaacg ctcacgcctg aaagaagacg cgattatcgg gcttatcttc tcctcttttt
     9721 ttggcgtcgg cctttttatg gtgtcgctca atccgatgtc ggtgaatatc cagacgatta
     9781 ttctcggcaa cgtgctggcg atcgcgccag cggatattac gcaactggcg attatcggcg
     9841 cagtctcgct gacgattctg ctgttaaagt ggaaagatct gatggtcgtc tttttcgatg
     9901 agacccatgc gcgttctatc gggcttaatc cgggtcgact aaaattgttg tttttcactc
     9961 tattgtccgt ctctaccgtg gcggccctgc aaaccgttgg ggcgttcctg gtgatctgtc
    10021 tcgtcgtcac gccgggcgcg acggcctggt tactcaccga ccgttttcca cgtctgctca
    10081 tgattgccgt cgtgattggc agcctgacca gttttctggg cgcatggctt agctactggc
    10141 tggatggcgc cactggcgga attattgtcg tcatgcaaac cttactgttc atcacggcct
    10201 ttattttcgc cccgaaacac ggtctgttag ccaaccgtcg acgcgcccgc ctgcagaagg
    10261 agccgacatg ttcttagcaa cgttactgga accctttcag tttgatttta tggtgaacgc
    10321 ccttatggtt tcggtcattg tggcgattcc ctgcgccttg ctgtccgtgt ttttagtgtt
    10381 aaaaggctgg gcgttaatgg gcgacgcaat gagtcatgcg gtattccccg gggtcgtgct
    10441 ggcatatatt gtggggattc ccctggcgat tggcgctttc attgccggat tattttgcgc
    10501 tatcgccacc ggttatctgg acgataacag ccgcatcaaa cgtgatacgg tgatgggcat
    10561 cgtcttttcc gggatgtttg gcgcaggtct ggtgctctat gtttctattc aatcggaagt
    10621 gcatctggat cacatcctgt ttggggatat gctgggcgta tcgctggggg atatcgtaca
    10681 aacgtcggtt attgcactgg gtattgcgtt aatcataggg ctgaaatgga aagatctcct
    10741 gctacacgct tttgacccgc accaggcgaa agccagcggg ctgaatacga cgctactgca
    10801 ttatggcctg ctatgtatga ttgcgctgac tatcgtcgcc acgctgaaat cggtgggcat
    10861 tattctgtcg atttcattgc ttatcgcccc cggcgcaatt gccattttgc tgacgcgacg
    10921 ctttgcgcgc gcgctgggat tagcggtgag tctgtcagtt attaccgctt ttgcgggcgt
    10981 ctatctgtct ttttatcttg atagcgcgcc agcgccgacc atcgtggtat tatttgccat
    11041 cgtgtttatt gcggtattta tttacgcaac atggcgcgac aggcgtaatg aaatcgtacc
    11101 agaggcgcaa ggttaacagc agcgttcaga aaataaatac gacagttgta gtagaaagcc
    11161 accctatatc tgttgttggt cagtatggta agcagctatc tttaaatttc tttacaacaa
    11221 gcgtaaagat aagctgcttt actccccatg tttttcctgt ttcgaaattt tttcagagtt
    11281 tggctaaccc agcataatgt gattattact cacaagatct gtaatatccc agcaaaaaat
    11341 aaatttataa ctacacgtaa tacaagagag tgattgtcac ataaaaaata gtttaattca
    11401 ttcctactgc aatcggtaac gcgcaattat cgtcaggtac agcagggtta tgtgcaaaag
    11461 cagtgcgctg taaatgcgcg tctagtttca gtccccgaaa cagagatagc ggtgaagagt
    11521 ccatccccaa acgatacata accttcttac gataaatact gacggttttt gttcccagac
    11581 caaatttttt cgccagttca attgccggat gtccggagga taataatatc agcagcgcat
    11641 atttcgcctg cgtgacaccg ggaggtagat tccaccaggc gtattgattg atattaaaca
    11701 atacctcttc cggcgtctcg ccggcattaa aagcatacgt agcagccacg gttttctttt
    11761 gtggcctgtg gcagaaacgc agccaggctt ccggaagacg gagcttctct cgctccgagc
    11821 ggatagcgca ggatagttcg tcttttaaaa cataatccat aacgccaaaa tattgcagca
    11881 cacagcgatc gatataatac aagcgatctg ccactaccaa aactttacgg ttctgcaacc
    11941 gcgcctgcaa cgcatgaaaa agataaacat gctcatgcgg gttcaaagct aaaatcagcc
    12001 cggcgtccgg catatcggat agagaatgca aaagtgcggt taatgagtta cacgttttaa
    12061 cgcacttttc cggatatttt tgcttaaaaa tagactgtag ggcataacaa ttagtccagt
    12121 taataccgta tataattaca tttctcattt atttatcctt ttttgaaaac tgaccacagc
    12181 ttcggtaatg atttttcttc ctgggcgact actgcgcaag tagataacgc cctcttacta
    12241 caaaggtaat aagaccagat acgttattac atgcgcaatg tcgttaccga aatgaattcc
    12301 ttttacaaat ctgataatga ttaaatttgc tgttttactt tactgtaatc tcttagagta
    12361 caacgattgc ctgacgcctt gtggccatgt atgtctgaca atgaacgctt tcggttccct
    12421 ttcattagct acatatcact ggtgtagcga tactgaaata tacactacga ttaaaaaaat
    12481 atttggtatc tgtaacgcaa acagatagta acgtttaaaa taatttcaca aatcaatggt
    12541 tcattgtacg cataaagcta agcggtgtaa tcttaaaatg ccgtttaaaa atagcgataa
    12601 aataagaagg cgtatcatag ccacacatcg tcgcgacttg tgaaatattt ccagcaccca
    12661 tacgtaataa ttttatagcc tgattcatac gagcatccaa gtatattttg ctaaaactca
    12721 cctcttcagc ggccagtttt cgcttcagac ttgatacgct cataaacagc tttcctgcca
    12781 cctcagcctg tgaccatttg cgggtgagat cgctgataat aatgttataa actttctctt
    12841 ttgttgtaat ttttattgct cgctcaagga aatcaaaccc accgggctta cgtacaaatg
    12901 ccgatataag atacatcaat gagaaatatg aataatcatg atcatcaata ctcacattac
    12961 tacaaacccg tggacatgcg acaccatgca aaatagagtc aaaagtatca ctcatccctg
    13021 gcaacaagtc cgcatgaaaa aaatactttg gtttcgtttt taatgatagc tctcgatcat
    13081 tatagtttct tgtactgtaa aaaactttgt agaatttttg cattaagtca taggaaactt
    13141 ccagtgaaga aaaatcaata tgtccttcta tttcgctcat actaagcgtg attgtttgat
    13201 ctttttccaa taaaaataaa cacagcgcag attgttcgat gaactcccca aattcgtttt
    13261 caattcgcaa actgccttta ttaagtttaa acaataagca gtttgcgaca taatagtctc
    13321 ttacgtcagc taatccattt attaatggaa atttgttcgg ttgttgaagg tgattattgc
    13381 taatggcctc aactgattta ttcattgaag gcaataccat attttatcct gtgtgctata
    13441 aggaactcaa aatcgttata ttcttataaa caaataatta aaactcacag agatgattta
    13501 aatccgattt ttttattatt atagccaata attacattcc aaagcgcgtt catttcgtca
    13561 caaaaagata cccttacaaa ctttatgcac aattttgtaa taaaagctta caatattaat
    13621 ataatccttt cagaataaaa cgcctggcag ataccttaat aatccatata catcaataag
    13681 atagatacac tggcatggtg cattttctgc attatttgct gatatataca ccatacctta
    13741 tcacaaatcg ccagcaatgg ggggttcacc agtcaattgc ctctttgttt tccccgcccg
    13801 ataaaataat ctcctgcatc caggaggtca tttgtgactg tgcattcatt gtaccaacta
    13861 ataccccgtt taaagcctca tataaatggg tgcccggttc aacttttgct aacatgtttt
    13921 gtagcatagc cgtttgctgc tcaaaagaaa caaaagccga atcaccactt ttaggatctt
    13981 tgaaggcatt catctcttga taaatgctat ctttaagcgt ttcagaagag gctgactcag
    14041 gaagcgccaa aagtcgttgg tagaatgcat cataaagatc aacgtcgccg ccattgctta
    14101 aaggcgcgct atccacatta ttcagcatag cggccctggc actcaacgaa accacacccg
    14161 tcacttcagt atccgctgtc gggaccaaat aagaagtcgg aatcgtaccc ggtatcacct
    14221 tataacctcc attttacaat gcttgcgttt ttgtcttcca ttcatcaata agtgcgttaa
    14281 tggcgttatc agaaatcgtc cggcagtctt gtggaagttc atcaagatga tgcttaatga
    14341 cgcctactgc tgtttcaaca aattgttcag gtgaaaattc tgcgatctga tcgccgcaac
    14401 tcatgataaa gcgctgttcc tgatgatatt taagattaaa agtgccaggc cagttctcca
    14461 taagcaacac catcagtttt tggtgttctt ttttcgcatt aactggcagt gttaaaaaaa
    14521 gttgcccctc cggcttatcg aaatccctta gccactcatc caggacggtt aaaagcgttt
    14581 cgggatggtc gaccgctgct gaaaataact cgcgggcata aatctgtatt ttttccatcc
    14641 acttccaggc cattgtctga ttatcagtaa gataagcggc gacctgctgt aacgcgtcta
    14701 tcattccctg ctcgtaacct tcctgatagg cgtacatccg caaggtcttt gcctcttctt
    14761 ccgcctctcg caaaatacgc ttagcccgtt ggtgcgcctg ctgttctaat ctttcaatag
    14821 agaaataacg ttccagcgtt ttacgcttta tcagtatccc ctcaacaggc gaaagcgggg
    14881 acggaattgg gatatttttg agcatattgt aaggccagta gcaaaattga catttctaca
    14941 gcatcctgct tcaatgcctc ctcaataaat ggaggaaaaa gcaaaggaaa acgctgtgct
    15001 aaagattcag gtaaaaattc attcagggca tttaactgtg catacccgac gctaagtaaa
    15061 aacctgtgat tcggcgcctt attgcaaacg gataaacttg ttccctgatg cattgccaaa
    15121 aatgcttgcg cccaatccgg caggccaagc aaggctccct gccttgccag atcggctctc
    15181 agtttatggc aaccgagtaa atacgctact tgcggcagtc ggcgccactg acgcagccac
    15241 agctgcgtca gtgagttttg aatacactcc ttttctccgt tcttaagccg ccatgtcgcc
    15301 agtattaact catttgccgc cgccctggcg gcgggtctga caatcatttc cggcgctatc
    15361 tgcaaccgct gaggatggat atacgataac ggatcaaaaa tgattctttg ccagataatg
    15421 ggtaatggct gcctattcat ttgacgattt cgccttatca tcagccgtta tgcctttctt
    15481 attgcgggca taatggtttt tgtaatacca gacgccagag cctgctgaca tcacggataa
    15541 caaaataatc aacacaatcc aactggttgc aaaagaatta cgttttactg gtgtgccggg
    15601 agcctgtaat tgggcatcag aacgttctga caacacaaca gaaatgttgt cataatccac
    15661 atcggcaaaa ctattcttta agaaacgctt gatatcgctg atctgatgcg caagcggcga
    15721 acctcgttca tatacggcta atgccgacag atgaacaggt tttggcggac ggccattttc
    15781 accagcatca atatcataac taatatggac cctggcggag agcacgccct ccatcgtctg
    15841 taatgactgt tccagtcgct gttcaatagc cgaatataac ctggcctttt cagctcgcgg
    15901 agacgatacc agcgaatccg ccgggaacat ctgcgctatt tccacccgtg gccggggagg
    15961 aagctgataa gttttaatcc agtacaccgc agcggtaaaa tcaggctcag caacggtaat
    16021 gctatagccc aattttccgc tatcaatttt attcgcctct atattgtgca tttgcagaac
    16081 ggcaatgacc tcattagcct gttcctggtc cagtcctttt aaaagatcct tatccttaca
    16141 gccggcaagg gtcattacca gcagaaaggt atatagatat cgacgaatca tgagcgtaat
    16201 agcgtttcaa cagccccgac tcctttacga gtaagggtac ttaccataga aacatacagg
    16261 ttataatctg aaatcatctc ttgcgaaata gccagctcat taggatccgt caccagatta
    16321 gggtcctcaa tcctgttggt aatcgtctgt ttatccacag ccgtggcaat cgccgaacca
    16381 gaaaaagcct ggagtagccg gtcatccagc gagacaatgt ccgtttccat aggcctgata
    16441 ttgaccgcct gccctataac ggcattctca gggacaatag ttgcaatcga cataatccac
    16501 cttataactg attaacggaa gttctgaata atggcagcat caatatcctt aaagactttt
    16561 accgtgttcg attgcgcgtt acggtacaag ttatattccg agagcttact ctgatacgcc
    16621 gccagtagcg ccggatcgga gggttttgct gctaatttat ccagcgcctc tgttacctgc
    16681 gtttgtagat tatcaacgcc cttatcaaat tttgctgaaa cttcatccag atagcctgac
    16741 caagatgttg gcataatgac ttccttattt gcgttaaatt aaagtgggct tgggaaatac
    16801 caatggcctg ggctcatttt gatataacct tccgccccgt actgaaatga gcgccccttg
    16861 agccagtcat cttttaattc gatcgcaaac tgcacatagc gtcctcccca tgtgcggtaa
    16921 tagctatcga caaattgacg ggctctgagt atttctacat catcgagcgc cccctgaata
    16981 acaaacgtta cgcccccctt atgattcctg cgggaataag gtaacgcctg ctgttttagc
    17041 cccgcttccg cctggcctgc ggcggtaaca tcgtccatca atgtgatgtt aaccgaatcc
    17101 gcgtaaggca ttagcgctct cagcttttga cttaacacct cgagctcttt cttgctcatc
    17161 gtgtttcgct ggcggcttag ccagaaaacg ggtttacgcg gctcatcgaa atgaagccga
    17221 taataagcca gctgcggata ataggtatcc agccaggtag agatacgctt attttcttcg
    17281 ttttcgttaa tcactcgcgc atttttatca taatcgcccc tcgctaaaac ctgacgagcc
    17341 cacagcgtat ctctttcatt ttgcgcagcg acatagagca ttttgtcccg tcctggcaac
    17401 acctgaaagc gctccttctc ctgccccaat aacgaatcga gctctgcggc ctgccgctgc
    17461 ggcgagttaa gtatccataa cgtccccacc gtcccaattc ccaatataaa aaacccggcc
    17521 agtgctgcta caattccgtt tttaaaacgc ggctcgttct tttttgcaga cgtttctaac
    17581 ttctcaggct gctcgggcac ccacggctcg ctttccgggc gaatcaggat aagcaattca
    17641 ccgacctgta ttggcgtatt taattgcacc gaacgagatt caggatttcc ttctttcagc
    17701 tcatggagta taatttcggt cgcatccgta tccacctgga tttcaaaatt tactccgcca
    17761 tggtccagcg ggataaaaaa gctatcggca ggtatatcag ggagttggcc tgaagcagtg
    17821 agcgcatcac tctgacctac cacaaagagt gttcggcctg tcagcaatgg aaactcacag
    17881 ccgttcagtg agctgttaag taatcgaact atgtatggcc ctgggcttgt tatcgtcttc
    17941 tcttttgatg tttccatata tactgttagc gatatctgtc gttctcgata gcagcagatt
    18001 accgcacagg acacagggat tcctgatgaa aatagaatga aaagtgagaa ataaaatcaa
    18061 tttattctgt ataatgcgtc tcaacacata ttaaaagaac catcatcccc attggggctt
    18121 aaactactgt agataaatta cccaaatttg ggttcttttg gtgtaacaat cagaccattg
    18181 ccaacacacg ctaataaaga gcatttacaa ctcagatttt ttcagtagga taccagtaag
    18241 gaacattaaa ataacatcaa caaagggata atatggaaaa tgtaaccttt gtaagtaata
    18301 gtcatcagcg tcctgccgca gataacttac agaaattaaa atcacttttg acaaataccc
    18361 agcagcaaat taaaagtcag actcagcagg ttaccatcaa aaatctttat gtaagcagtt
    18421 tcactttagt ttgctttcgg agcggtaaac tgacgattag caataatcac gatacgattt
    18481 actgtgacga acctgggatg ttggtgctca aaaaagagca ggtagttaac gtgacgcttg
    18541 aagaggtcaa tggccacatg gatttcgata tactcgagat accgacgcaa cgacttggcg
    18601 ctctctatgc acttatccca aacgagcagc aaaccaaaat ggcggtaccc acagagaaag
    18661 cgcagaaaat cttctataca cctgactttc ctgccagaag agaggtattt gaacatctga
    18721 aaacggcgtt ctcctgtacg aaggatacaa gcaaaggttg cagtaattgt aacaacaaaa
    18781 gttgtattga aaatgaagag ttaattcctt attttctgct gttcctgctt actgcttttc
    18841 tccgactccc tgagagttat gagatcatcc ttagctcggc tcagataacg ttaaagaagc
    18901 gcgtttacaa cattatatct tcgtcaccca gtagacagtg gaagcttacg gatgttgccg
    18961 atcatatatt tatgagtacg tcaacgctca aacggaaact tgcagaagaa ggtaccagct
    19021 ttagcgatat ctacttatcg gcaagaatga atcaggcagc aaaactttta cgcataggca
    19081 accataatgt taatgctgta gcattaaaat gtggttatga cagcacgtcc tacttcattc
    19141 aatgtttcaa aaaatatttt aaaactacgc catcgacatt cataaaaatg gcgaaccatt
    19201 aacatttttg tatcagtcac tcaagtaaag atttttatta aaattttaat aatttaaaat
    19261 tcagaccgtg cattaacacg ctatatcagg atgggaggct attcaacatc attgttctgt
    19321 ccggaagaca gcttatactg atatctctgg taatttaaag taaggctgat tatataacac
    19381 gatttttgtg aacttgtcat cgctatgatg actggtaaac cgatattgcc ttattcacag
    19441 cgtaagaatc cgtccagatg acactatctc cttccggctt taaccctatg gattaaggcc
    19501 ggcattttat tcatatttat acatcatccg ttccctctga gaactatttg cctgaacggt
    19561 ctacaccgaa acagtcacgc ttgttagctt tctgccaggc atacatcttc tcttcatcct
    19621 gatatcgata taatgcctgg gggccagctt gaggatgata ctgctcataa acccctgcct
    19681 ttttgacgct atagctgaag gagtaaagaa aagacgatat cattattttg caaaaaaata
    19741 taaaaataag cgcaccatta aaaacagtct tgcatttata ttttggcacc taagacaaat
    19801 tacactctta aactttcaac gaatggtcat ttagtggaaa tcttcgagaa aaatggttct
    19861 gatggtgtaa ttatcagacc attaaccatg aagatataat aagcagcatt tacaccccca
    19921 aaaaatgcag taagatagct acaaaactaa tctctattgc aatgagacca agttaaatat
    19981 gtaaatattt agatgcccgg cgctgactct cggcaccagg atatacgaca gcgtccattc
    20041 gacaatcacg gttagttata acaatatcat taccaacatg tcagttattt aaagcacagg
    20101 cataagctaa ataatcaaat gttaaaaaca tataaacccg agcccgtaca atatgacatt
    20161 aagctcataa taaaagctca acctgaccgt tagtactagc agcagaatta ctgaaacagt
    20221 agattctatc ctaacgactt gtattagcta ttataacttt tcaccctgta agagaataca
    20281 ctattatcat gccacatttt aatcctgttc ctgtatcgaa taaaaaattc gtctttgatg
    20341 atttcatact caacatggac ggctccctgc tacgctcaga aaagaaagtc aatattccgc
    20401 caaaagaata tgccgttctg gtcatcctgc tcgaagccgc cggcaagatt gtgagtaaaa
    20461 acaccttatt ggaccaagta tggggcgacg cggaagttaa cgaagaatct cttacccgct
    20521 gtatctatgc cttacgacgt attctgtcgg aagataaaga gcatcgttac attgaaacac
    20581 tgtacggaca gggttatcgg tttaatcgtc cggtcgtagt ggtgtctccg ccagcgccgc
    20641 aacctacgac tcatacattg gcgatacttc cttttcagat gcaggatcag gttcaatccg
    20701 agagtctgca ttactctatc gtgaagggat tatcgcagta tgcgcccttt ggcctgagcg
    20761 tgctgccggt gaccattacg aagaactgcc gcagtgttaa ggatattctt gagctcatgg
    20821 atcaattacg ccccgattat tatatctccg ggcagatgat acccgatggt aatgataata
    20881 ttgtacagat cgagatagtt cgggttaaag gttatcacct gctgcaccag gaaagcatta
    20941 agttgataga acaccaaccc gcttctctct tgcaaaacaa aattgcgaat cttttgctca
    21001 gatgtattcc cggacttcgc tgggacacaa agcaaattag cgagctaaat tcgattgaca
    21061 gtaccatggt ctacttacgc ggtaagcatg agttaaatca atacaccccc tatagcttac
    21121 agcaagcgct taaattgctg actcaatgcg ttaatatgtc gccaaacagc attgcgcctt
    21181 actgtgcgct ggcagaatgc tacctcagca tggcgcaaat ggggattttt gataaacaaa
    21241 acgcaatgat caaagctaaa gaacatgcga ttaaggcgac agagctggac cacaataatc
    21301 cacaagcttt aggattactg gggctaatta atacgattca ctcagaatac atcgtcggga
    21361 gtttgctatt caaacaagct aacttacttt cgcccatttc tgcagatatt aaatattatt
    21421 atggctggaa tcttttcatg gctggtcagt tggaggaggc cttacaaacg attaacgagt
    21481 gtttaaaatt ggacccaacg cgcgcagccg cagggatcac taagctgtgg attacctatt
    21541 atcataccgg tattgatgat gctatacgtt taggcgatga attacgctca caacacctgc
    21601 aggataatcc aatattatta agtatgcagg ttatgtttct ttcgcttaaa ggtaaacatg
    21661 aactggcacg aaaattaact aaagaaatat ccacgcagga aataacagga cttattgctg
    21721 ttaatcttct ttacgctgaa tattgtcaga atagtgagcg tgccttaccg acgataagag
    21781 aatttctgga aagtgaacag cgtatagata ataatccggg attattaccg ttagtgctgg
    21841 ttgcccacgg cgaagctatt gccgagaaaa tgtggaataa atttaaaaac gaagacaata
    21901 tttggttcaa aagatggaaa caggatcccc gcttgattaa attacggtaa aatctgagag
    21961 aggagatatg cattattttt ttatcatcgt aatctggttg cttagcataa atacggcatg
    22021 ggctgattgc tggcttcagg ctgaaaaaat gttcaatatt gaatccgaac tactttacgc
    22081 tatcgcccag caggaatcgg cgatgaaacc tggcgccatt ggtcataacc gagatggttc
    22141 aaccgatctt ggcctgatgc aaattaacag cttccatatg aaaaggctga aaaaaatggg
    22201 gattagtgaa aaacagttgt tacaggatcc ctgcatttct gtcattgtgg gcgcatccat
    22261 tttatcagat atgatgaaaa tctacggttt tagctgggag gccgttggcg cttataatgc
    22321 cgggacgtcg ccgaaacgat cggatataag gaaacgttat gctaaaaaaa tttgggagaa
    22381 ttacagaaaa ttaaaagaga tgtcagcaga agagaaaaac aaaagacttt ctatcgcggt
    22441 aaacaaataa ttatacagga atagcttact ttcagataat tctaaaagta agctatgttt
    22501 ttatcagctt gccgtcgtca taagcaactg ggcttgcatt gcttttagtt gtacaaactg
    22561 tgaggcgtct tccagcattc tattgttccg tgaattccgg aaatctgcac gtacctgctc
    22621 cagattacta tgaggattat ccttaagtac aagagccgcc gccatcgttc cggttcttcc
    22681 cactccgccc agacaatgaa tcatcggtaa atgcttatct gatgaactac gccccggcgc
    22741 gccattttgg ttactatttt tcaccctatc cgccaggtat tctaactgat cagtagacgg
    22801 taacggctgg tgatctggcc aatttttcac atgcaatacc gggattgtat accgcttttc
    22861 cccgcaggac agttgcatat tgtattggtc tatcgctcct ccctgactgg ctgagctcac
    22921 tttttggctg ttggtatgca cctcgccaaa ggtgtagctc cctctgaaat aggctggtaa
    22981 ttgttttgcc tgcatctgat cttccgacgt taacaccacc aggcacgaac attctttttc
    23041 aagaagcatt ttcatatgcg cttccagcgc atccggcgta ttttttgggc acgaaccggc
    23101 taatgccaca ggcttaccgt caaaagttaa cgtattcact ggcacaggca ttccatcgct
    23161 cagtttcacc tgggtttgct gattaatggg aatgctgctg accgcaaacc gtgccaggcc
    23221 cagtgtcggt ccgctcatcg tctgtggcat tgacgcaccg gcttttattt tctcaagttc
    23281 agctgtaacg tttttcagtt ctttagcaat aacgtgaatt ttttttaccg cttgggttaa
    23341 ttcatgagta gaggctttat caatccacct ctcaacctct cccccacagg ttccccattg
    23401 tgagaacctg tctgctccta tctgaatatt ttttaacgtt gtaacataat cattaagttg
    23461 tttagcctct ggaattttat ttaaactctg taaattcgtc attaatgaac gcagcgggcc
    23521 gttacctgaa gccatctcct ggaagttttc tcgcaggcta tttccatcca tttgttccag
    23581 ttacggtatt gttctcttaa gtccctttag cgcgatatcg agtaaaggtt gcttactttc
    23641 tgcaccaaca tcgttatttt gttctgtcac ttttgtatcg ccgcctttta tgactaaagc
    23701 ggcattcatg acaccaacat tatccttgtt cttaataaga tttataaacc ctccgtcagc
    23761 accttttaca cactccgtga tctgcactac taaacgttgg gtaaggggtt tgttcatatt
    23821 tatactggac atgtacaaag cattattgac cgctttttcc ccatattttt ccgttaatgc
    23881 ctggagaaat gtctgtaaaa tcttttggtt ctgtactctg atattttccg tgtgtttttg
    23941 caccacttca gtgtttttaa ataagggcat ttttccaagc caggttaata cttttgacga
    24001 aaatttttca ggcgcaacat atgccttatc agtattttcc ttagcaatat atagccgggt
    24061 atcactcgac acgccagatt ttgaaaatga agacaatgtt aaattattca acttcctctc
    24121 atcatacctt agcatattcc tgtagtatgt ttttgagcgc ttcctgctta ttcacaaatg
    24181 actcaagctg cgatatgata tgataaatat ttgtcagatc ggtaattgca tgtataaaca
    24241 acaacgtctc tgcggcatca atatacgcta acgtaccttc attattcgca gccagttcac
    24301 cattaatcac cataatctgc cgccagatag aatcgccaca aacaggcgat agcggtataa
    24361 tcataccgtt caataaccag atatcatctt tagcttcaat agacgtaaaa atatcgctat
    24421 cgagtagtaa taagcactga ttgttgtcat caaaagtgag cggtaaaccc aatttctcac
    24481 caatattagc gataatatcc tggtgtgctt gcaatttact ttcctcttta attatatctt
    24541 ttacaagatt gcttcttcaa atttaatctg gttacacaat gccttgatat tttttcgcgc
    24601 ccatcgccga gcgcaatatt tctctccttt aatccagtag aatagccatt cactacgcat
    24661 cggaacacaa atcagcagtt ccttcggatc attttcaaca tgacgtaact tgcctttaat
    24721 aacaaaacgc gaactgtcag caatatcatc atatattgca gccatgcctg aaccgggtac
    24781 tacatgtgtg atgattttca taacaattaa tcttgttcaa ttgttgtcga gcgagagaaa
    24841 aatactacac cctggactca agactttttt taacaacacg gcatatatcc gcaaaggtcg
    24901 tcatatcagg aagatcgttt tcattacaac taatgtcaaa ctcctcacta agaccaaata
    24961 caatatcaat taaatccaat gagtcagcgt aaagatcctc aaccagatgg gtctgaccat
    25021 tgatactatc aacatcaacg gcaatacagg aggtgatcac ttttttgact cttgcttcaa
    25081 tatccatatt catcgcatct ttcccagtta attaacgctg catgtgcaag ccatcaacgg
    25141 tagtaataac ccgatccaca ccaggtttat tcaggtatga ctcgtaagcc gggccagctc
    25201 gccagctacc gtctccgata aggccgtcca gcacattact taacacatag tcagtttccc
    25261 ctttttgcct ggtcaacccc gcctctctgg caaactgcaa tgcaatctca gccagttttt
    25321 ctttttgtgg atgatgagta atgacctctt tgagcgtctc cattttcgct ttcaattctg
    25381 ggtgcttgtc aatatcgcta cattgcgctt tcaacgctgc actctttatc gtgtcattgg
    25441 gtaatatttc cccacgcaag ccgtcaaacg ctctgcgtac aggaaacggt gtagaggcat
    25501 ccggctccag ggctttacgt atcacaccca aaaacgcctc acgggcgttg aaatgtattg
    25561 aatgcatatt cgtaacgctc ggtactgttg agaggaaact attttgctta aacttcaaac
    25621 cagaaaatgg gccagtctta tctgtctggc tattatcatt atcggtcgta ccggctttat
    25681 tacctgtaat taccgtcgag tctgattgta aggtatcgat tttaacattc tcgacgccag
    25741 ccagttgact ggcaagcggc ttcacattca caatctctgc cgtctggctt tgctgtttat
    25801 tatcatcaac gccgtgcacc gtggcctgta acggcttgcc gataatgctc ttgctggtta
    25861 cgccatcgac ttcatcaaaa gaggttgttt cacccgtagt gcccttttct gacgtgacca
    25921 cctttccatc tttactttcg gatgaagagt tggtcacagc ctctgccgtc gcatgagccg
    25981 tgacgtcaat tttacccgcg atgccatggt caattgtccc tgtgctggcg ctgtgtgcgg
    26041 tctccgtttg atgcgtagtc gaatccacac gcgaatgact atgacttacg ttgctgctgt
    26101 tagtcgaatg gtgtgactcg ccatggcgtt ggctgttatc aataaatgtt cggctattat
    26161 caatcgtctt ccggctatta tcatggttgc tattatcgat atggcgctgg ctattatcga
    26221 catggcttcg gctattgtta atatgcttac tgttatccac gctatggtta ctgctatcaa
    26281 tattaatatt gatattaata cccgtaggtt ctgctttttt cccaccatca ggtactggtc
    26341 cagccgcagg ttccggaatt ttagggtcag gcagtttatc tgcaggaatt tgtgcaaaaa
    26401 cattacgtag cagcaggggt atcaacgttt gcatttcaag gtgccgggct tcccgtccta
    26461 cgctggtacc ctgctcttgc gttaattttt ggtggcacat atcaagcgcc tcaaccgcct
    26521 tcgccgccgc tttgtcaaca agctgcgtaa gactgctgcg ggttaacgga tctaacgtac
    26581 agccaaagtt atgttcaatg cagctggcaa tatagggcat cacctcctgc ataacaagat
    26641 tcgtcgataa tttacttaat tcaccgccag tgttattttt gatgatatct aacagctgct
    26701 tttccaggtt ttccagcttc gcttccgctt tctttgtttc tggcagccat ggcccaaaag
    26761 ctgacttttc tttcaggcca tcttttatga tttgcgcggt atactctgcc cccaccttca
    26821 tcagtagcgt cttcgcctca ggagaatcac tggtggcgtt gagcgctgaa cgaaagaggc
    26881 cggcaaactc cattatcgct ttcttaccgg cgacattatt tgaattggta aaaacttctt
    26941 ttaacgcctc ggcgtctttc ccgcatttaa acaacgcatc cagactcgcc tgtttgatca
    27001 gcgcgggaaa atcttccagt tgctggcctt taatttcccc tgacagcgtt gctgtggcac
    27061 tttctctgac cgcggaaaga ttcgccgcaa gattcgtggc ctgcgttttg atctcggtct
    27121 gcatacctgg cattatgacg gggggctgag ttcttacact tgtaaccatt attaatatcc
    27181 tcttctgtta tccttgcagg aagcttttgg cggtttccag gctgctactt atcgtactgc
    27241 tcagcacttt taccaggttg tcgtacaatg aattggcatt gctatatttt tgcgtcagcg
    27301 tctgtaatgt ggttttcaga ttttcttcct gtgctttaaa acccgactgc caggcttgat
    27361 atttggcgtt atccagttca agggctgaac ccgatcctat tccattaaga tcgctaacca
    27421 ttttgctcag tggccccgta tccaccagta cgacatagcc agaaccagac gcctttagac
    27481 agctgtccgg taaattcaat tctttaatcc actgctcagc ttccgctttc gttgctgttg
    27541 tcattccgct gccagtttgc gagggaaata aaatcgtatt tttatttatt tgagtgtatt
    27601 tattaattaa actacttatt tcacttttaa gtgagtcaac atttagctta atggtatttc
    27661 catccttacc aggcgataac cagcctccca ttttggaaag aatatcactg aaggcctgat
    27721 aaaaatcggt atagactgcg acaacgtttt cataaacgcc caggtagctg tcacctatcg
    27781 ccgatatatt ttgggaaacc atatcccaaa tctcagcatc agaaatggtt gttctcggct
    27841 gcgccatagg cgaagcgcta aataaggccg acgtcggcgc agaaaacgtg ctccgcaggt
    27901 tctcattttg ttctgcggat aatgacacgc cggacttcgc cagcgcattc aggctgctgg
    27961 tcaactgttg gcgcgccagc gtgcgctcgt cattattctc ttcagaaatc ggtggcgttg
    28021 actgcagcgt ctgctgtgcc tgctggattt tagtagccgc ctgcgataat gaaatgatat
    28081 ctgtgccgcg atgttctgtg gtagacggta ccacggcaat ctcggcgtgc tcgctcgccg
    28141 aaggagtctg cggccgttcg gcaacgatcc ccggatgagg agaagcggaa taattttgaa
    28201 tattaagcat aatatcccca gttcgccatc aggagggcga ttaaatcccc ccctgatggc
    28261 gtatagttga tctgtcagat taagcgcgaa tattgcctgc gatagcagcg agtgcggatg
    28321 ctttcgactg gttaatgctc tccattgttt tcagcatttc ctgaatcagg ctggtcgatt
    28381 tacgtgaact ttcacgggct tcgtccgatg cggtgctggc aacccggtta ttcacctggc
    28441 taatttgctg ctcggaacgt tcctgagtag cggcgtactg cctggacgcc cctgcaatac
    28501 caccgaccgt gactgagttc ttcataatca gatcgcccgt catctgcatc ttgcgcgcat
    28561 cgattcgggt catatccatg gtattctgct caagacgaat atcggattcg acagactcaa
    28621 gacgtttcga cagaatagcc tgatgttcag gggagatttg tttattactg tttttaatac
    28681 ccagactttc cgtggcgctg gttccggcat tagatttaag cgtcgcatca ttaagatttt
    28741 tcgtcgcatc ggtaccggtt ttcttcatat ttaacgattt cagagaatcg acgccttcag
    28801 caccaagttt gacgctattc tgcccgttca gcacgttttt aatactgtgg ctttcagtgg
    28861 tcagtttatc gatcttcgcg gcattatgtt taagcgcgcc tctttcattc tgcagcccct
    28921 tatattccag tttggcgccc acgccagtga tccccaactg aagcgcgctc tgggaaatac
    28981 taccggacaa cgcattcatc ccttcgcgca tcatggagct tgccgtcgtt ttagctgcat
    29041 caaaactgac taatgacaac ttaccagaca gtttgctatc agcctggttc aacgtcagca
    29101 ttaacgtatt cgcggcagcc aacagcgcaa cggcactgga agacattccg ctaatatcaa
    29161 aaaactttcc gacttctgcc tgctgctcgc gtaactgggt ttgcacaacc tcattcgctt
    29221 tagtcgtgac attatttgcc agggcattca aatcctgatt catgtcggta ttttgaatac
    29281 tggcttttaa aaaggacgtg atcgttccgg gggtttgcgt taatacccct ggcgcaggcg
    29341 cgctcagtgt aggactcaac cccaggtcac tgactttact gctgctaata ccaatactat
    29401 tcagaatatc tttagcgcta acggattgcg aagctgtctg tgaactattc tcaacagaat
    29461 gattatttaa ataagcggcg ggatttattc ccacattact aattaacata tttttctccc
    29521 tttattttgg cagtttttat gcgcgactct ggcgcagaat aaaacgcgaa gcatccgcat
    29581 tttgctgtac cgcagaagac atggcttttt gcagttccgc cgttaccttc tggttttcac
    29641 caaatatttc tacggattgt ttaagccact gctgaatctg atccatggca aaacgggcga
    29701 gcataaaatc agcaagcgcc tcgctggcat ttttaataaa taccccctcg gcaaccccac
    29761 cggctgactg ggctgcggta ttcgtgactt ccatgcccaa cgccacttta tttagggtat
    29821 tacctaccag ctctttactt aaggcattcg tttgcaggcc catcttgcta cccacattac
    29881 ccaggccgct agtaatacgt tgcatcccct gggtaaagag tttgctgccg ttttgtgcca
    29941 actgtttcag cacgttaggc accaacttct taatcgtttc gcccatcatt ttgctcagcg
    30001 cgttacccag tttcgccgcc gcgcctttcc cgacaactgc gaccaccaca atgaccgcta
    30061 ccatggcaat agcggcgaca atcgcaccaa caatgctgcc tgccatctct gccgttttct
    30121 tatcgacgcc taatccttcc agcgctttgg taatcgcctt gccaatcagc tccattaacg
    30181 gcttcagcac atgctccata atcgggttta gcgcctgctg aataaacgac acccccgtcg
    30241 ccgccttcac aatttcatcg gccaccatta ccgcaagtcc caccgcagcc agcgccagac
    30301 tcgccccacc ggtaaaaaca gcggccacaa cgctgacaat ggttagcagc gcgccgagga
    30361 ctttcccgat acatcccata atgcggttcg tttcctcggc tttgcgcgtc tcttcctgga
    30421 attcagccga tttcttttcc atctccgcct gacgcccttc ctgcaaggcg ttgaaaagcg
    30481 caagatcgtt ttgcaggctt tcttccgtat ttttgcccac aatctcaata aacatggcca
    30541 tgagcatagt gaggcgggcg acatttgaca gattatcctg ctcaccctgg gaaacctgat
    30601 tctgagaggc ggcattagcc gttccctgga atttggtcag aatgttatcc gctttctcgg
    30661 ctttcgcttt ggcgtctgtg cctgctttaa ccgtcgcatc cgtggcctta tctaaggcct
    30721 ctttcgcctc tgtcgcttct tttccggcct gttctaccgc ggcttcagct tgtgcatagc
    30781 cggggtcagc tgggtccagc gattgcaatt tattttgcgc ctgcgtcagt tttttggccg
    30841 cagcgtcata aacactcttg gcggtatccg tctttttgat gctggcttca tagagatccg
    30901 tcgcctcctg agcctctccc agagccgtct ggaattcttt cgatacctga atccccatct
    30961 ctttttgtga ctcaatcatc gcctgccata ccgccagacg agactccagt tgagacagcg
    31021 aaacatcgcc cagtagtgtc attaacttgc caagcagtaa tgtcaattgc ccttcgctgg
    31081 agagtttttc ccgggcggcg tccgtaggcg gctttagacc caccgtatta atagcgctct
    31141 cgccggactt tgttccggct ttaaggtcgc ccgctttcgt tgccaccaca tctttaaaag
    31201 ctttatccgc cgcttttaaa aagtccgtgt tcttacgaac gccttcaaaa gccgcctcag
    31261 cgaggcgcgg attttgggta tatccgctac ggctaatgct acttgcgtca tttaccataa
    31321 ttattccttt tcttgttcac tgtgctgctc tgtctccgcc gtttttagcg cctccagata
    31381 gaccaacgct tttgcccgca gagactcatc ttcagtacgt tcattgacaa gttcaaaaca
    31441 ctgtctggct tttgccgcct tacgcattaa taattgacac tgcccggtaa aaaaaacggg
    31501 gcgataatca tttttaagta acgtaaacgc tactgcataa aggtcacatg ctttctgaaa
    31561 ttgttttttc agttggcata ccgccgccag tcccatggtg taatcgggat tgtaaaaatc
    31621 ataaatgcat aagaaacgaa agaatgtctc agcttcatcc agtcgtccct ggttataaaa
    31681 ctcataagca tgagcatata aaccgtccat catatcttga gggatcccgt gaacgtcttt
    31741 tagcgtggcg ccttcactaa cggcatccca aatcatttcc gcaacacgtt cttcgctgac
    31801 attattttga taatccatta cttactcctg ttatctgtca ccgactttgt agaacttaac
    31861 gactgcgttt atctgatgca gttattaaac cccgacggtg gttagtgaac attcaaaaaa
    31921 ctcccaatga atacatcgct actgctttac gcggctcaat gccgtacctc gttttcttgt
    31981 ggctgaataa cgtctttgcc cgcgttttct acctcttcca gccaaaccag aagacgtaaa
    32041 acttcatcaa tttcttccag actcaccaga tcataacggc gatgggtttt gaaaagactg
    32101 cgcgccagtt tgatatcgac gatcacaggt acgccaacct tctccgcata ggcgcggacg
    32161 gccagtgcgc gctgattcgt ttcatacacc gagatcatcg gaatcggcat caattcgggt
    32221 ttaaaataaa tcccgatcgt aatatgcgtg gggttggcaa caatcaggcg tgagttttca
    32281 atatcggatt tcacctgttc agacagaatt tccatatgaa cttcacgtct tttagattta
    32341 acctctgggt tcccttcctg ctccttcatt tcacgcttca cttcttcctt atccattttc
    32401 atatctttca tggtcaggaa atattccgca atagcatcca ataataagac aatcaatgcg
    32461 caagcaaggc aagttaatac caatgcgagg agaagttcac gccaaatgac ggcaatatcc
    32521 acaacattgc catttaactg agaaaagatt tcaaccttat atttcttcca gcaaatgatg
    32581 gcggccacca caaaggatga gagatacagt agggttttga ccgtatcttt aaccgtgcgc
    32641 atactaaaaa gttttttcgc cccttctacc gggtttaacg ccgataaatt aggttttaat
    32701 gcttctgtcg ccagcacgaa accggcctgt aataacgccg gtaatgcgga acacactaaa
    32761 cagagcagca taaatggaat cagatatttt aatcctatcc caaaaacggc caaactgtaa
    32821 tcagccatgc tctgatcaaa attatccgca ataatgatct taattatccc cataaactca
    32881 ttaaatgagc catacgacac cagataggca attcctccca gcgtcagaca ggcgataatg
    32941 agatctttac ttttaaatga ctggcctttt ttagcggagt cttccagccg ttttttagtc
    33001 ggtttttctg ttttattcga ggacatgcgt cgcccctcgc tcgtaaaacc aactgcttaa
    33061 ccctgtggcc tggaaagaga gtcgcggtac attgtccggt agtaccggag agaaataaag
    33121 cagcataatt aaaacggcaa tgccgctttt taccgtcagt gaaatcgcaa aagcgttcat
    33181 ttgcggagca aagcgcgaca ataaacccag gaatacttct gacagcaaca gcactaatac
    33241 caccggactg gccagaacca aggcgttttg agccacctga ttaataaacg ttaatagcgg
    33301 cggtaatgaa ggcgtgcact cgttcatcgg atcgcatagc tgatagcttt tatttaacac
    33361 gtcaaccatc gtgaccagac cgccgttttg taaataaacg acagcggcaa acatattcag
    33421 gaaattagcc atttccgagg tatcaatacc gtttgccgga tcgatactgc tacttagcgt
    33481 tgcccctcgc tggttatcga taatacaacc cagcgcatgc ataacccaaa aaggccatga
    33541 cagcagacag cccagcatga cgcctaccgc cgcttcttgc agaactaacg ggatcatcgc
    33601 caccgataaa aacggcggcg cctcgttcaa tgcatgcggc catactccca atgccaccag
    33661 gatgataatg gcgtttctcg gcgcgccgct taataccccg ctattcaaaa acggcaggaa
    33721 gaaaaaaatc ggcgctacgc gagcaaaccc tagtgccgca gacgcaacca ggtgatgaat
    33781 ttcaaagtac aacgcgtaaa gcatttttta ccccttagcc aacgccagga atatcacctg
    33841 acgcccgtaa gagagtaaaa cttcgccata ccagccagac agtaaaaaca agcataaaca
    33901 cacgccaagt aatttaatgc caaaaggcag cgtctgttcc tgtaattgcg ttaccgtctg
    33961 gaataaccct accaggaggc cgataatcgt tgcgacaatc gtcggccacc ctgacaggat
    34021 caaaacaaga tagagcgcct tattacctgc aaacactaaa tcatccattt aactatcccg
    34081 tctcgtaatg atgtcatgtt gcaatgtcca tatactgtaa tatcaatccc ttagacagta
    34141 aggtccagcc atcaagcgcg acaaaaagca ccagcttaat aggtgtagat atcgtcaccg
    34201 gactcatcat catcatcccc agcgccagta gcacgctgga taccaccagg tcgacgacaa
    34261 caaagggcaa atagagataa aaaccaattt taaacgcgct ttttatttcg ctcagcgcat
    34321 aagcaggtaa taacgcaaat attgatggtt tttcaatttc atctttgtca cgctttaccg
    34381 tctcggtctc ttctccatac tgacgcttca gttgcgcgtt ttcaaaaaac tgaactaact
    34441 cgcgatctga atatttgatc agataatcgc gataaccatc cagaccttca tcaacgtgtt
    34501 tacttaatga cgaaatatca ttaaaggtga catcttcgtc ctcaaaatag acgtaggcat
    34561 catgcattat tggccacata acaaacatag aaagcagcaa tgcgacgctg ttaagcgtca
    34621 tatttgaagg tatctgctgc aatcccaggg cgttacgcac catgacaaat acaatagaaa
    34681 atttaacgaa acaggttcct gacgcaataa taaatggcaa cagggtggaa aatgccagta
    34741 aggcaattaa tgagatatca ttccccatta ccagactcgc tcagccattc atggatctca
    34801 acgcctaagg tgtcattcat ctgtaccagt tcgccattac caagcaaaac accattcgcc
    34861 ataatttcaa cgttaagttc aacattggtc ggcagtgata atagctgttg ctgccccatg
    34921 gcttcgagtt cggcgagggt aacgttctta cgatacaaaa caaattccag tttgacgggc
    34981 aattgattca agccaggcag agtttctgca gtttcagttg tattattttc ttcttcgata
    35041 tgttgaatat ctaacgtttc cacaataatt cccccttcaa cacggttgaa atgacctaac
    35101 tttttcgcgt agcaataaac ttccgcacgg gaagtacgaa tcaggagtac atctccgatc
    35161 ccgattcggc ccagcaaaga acgctgcgta tcactgctac cgattacaaa gcgcaacggc
    35221 caacgcagca ttttcggcct gccgcccccg actgcaggca gttcaggaag atgctcaaac
    35281 cacaggccgc cccgatcgct cataatgtgc aacaatttcc cttccggcag cgcgcttccc
    35341 ggtacggggt tctctacgca taaacgccga caggacaaat gcggcacggg caactcaaac
    35401 ggtcgctctg ttgcagcaag ccagggaacg accaggtgct cagcaccggc agaaaccgcc
    35461 gcccccgcca gagcgggaga gacatgctca agccagcccc caggtttaat ccaggccgac
    35521 caccgttttt ctgcatcgct caaccgaacc cacattccct gtcgcgtcgg atattccagc
    35581 gtcgcttccc ggccatggcg ctggcattct gtcgcggttt gcgccaatag ccattcgcga
    35641 cgatcaatct gtctcacacg caatgacatc aggcgtcatc ctcctcgcca gattgctgtc
    35701 tgtgctgttg ctgctgcgga ttttgttgat cgtctcgcgt caggtgccag cgctggggat
    35761 taccgttttg ccattgatca tgcaaacgat gttcaacctg cgtatttgac ggtattaacg
    35821 aaaactcccc tgcttgccgc gcctgaatat tgacggaata gtcatttccc cagcgctgaa
    35881 aacggtaagt cagcgagcta tcctctcctt tcacgccatc ggcagtggga aaaatagtca
    35941 tcatcggctt tgattgcgcc gctaaaggca ttttttcatc gccgccggtt aattggctaa
    36001 gatcggcgat agtggttggt tgcagcggaa gctgagaaac atctttaacc tttttatgat
    36061 ctttatcgtc aggcttaccg gtattggctg cggccattcg ggcaggtgcg acatcccgcg
    36121 ccagcggcgc gccctcttta cgaacgcctt cgcccgcgat ggctttatta tccccaggca
    36181 atgccttgat attatcgtca gagattcccg tggcattatc ggttacttca ctaacggatt
    36241 ccacggcttt taaatcagca gataattttt taccgcttac gctttctaac ggcctatttt
    36301 taggcgatag caacgctgcg gatttatcta ctttggcctc cgcagaaatc aaaccgacag
    36361 atttttcagc agtgactttc aacagttttt cagcaatcct gagttcgcct tttccgttat
    36421 gatgcagacc agaaacgttg ccattgtgat gttctgattt cgctggcgcg caatgtcgcc
    36481 atgccgccag taataccggt aaagccgttt ctttatgcat tacgaaagca tcgccatagt
    36541 cgcgatcttt tttatcaccg gaatattctg tcttatgttt ttccaccgtt ttttttaatg
    36601 cttctgataa accgccaacc tcatcctgct gcggcagtaa aatgttcccg gatgaactga
    36661 cagctgacac atcgcccatt aaattatctc ctctgactcg gcctcttcct gctgtatctc
    36721 tcgctggata tagtgtcttt tctgacgaat tatccagcgt tgatagttcc cttctttgcg
    36781 caaccaatat ttactttttt tctgaaactc ttcccttttc ttttccagct cgctccgttt
    36841 ttcctgaatt tgtataatct ggagttctaa atcttttatc tgccggcgaa caatagactg
    36901 cttacgtaat aacgtataaa tttcctcacg actgagctgt ctgttttctg cacgcagcgt
    36961 atctaataac aatttcagac ccgctatttg ttcaaggatc gcctcctcct cggcctgcag
    37021 cccgcggtcc tcatcctgat agcgaagtaa tattgactca cactgtgaat gaaataccgt
    37081 acagcgccgc tgtaaaactt taattctggt cagcgaatgc attcataccg ctcaacgtgt
    37141 catcaaagga tgaatattgc gctaccggct ggcataacca ggctttcagg ctatcccgca
    37201 tctgcatcgc ccgatcgtta tcgatatttt cgccaggacg atattctccc aagtcaatga
    37261 aaagctggag ctcttccaga cgcgtcatta atttacgcac ggcagatgcc tgttcagcat
    37321 gtgtcggcgt cgtgacttgt ccaaaaacgc ggcttacgct tttcagtaca tcgattgccg
    37381 ggtaatgtcc ctgcccggcc agctttctgc tcagatacag gtgaccgtca aggatagagc
    37441 gaatttcatc cgccatcggg tccgcctctt cctcgctttc cagcagtacc gtataaaagg
    37501 cagtaatgct tccctcgctg gtcgccccgg ggcgttccag caagcggggc aaattatcga
    37561 atacggaggc gggataacct cgacgggccg gacgctctcc cgacgccagt gccacatctc
    37621 gcaaagcacg cgcataacgg gtcatggaat cgataaaaag cacgacccgt tttccctggt
    37681 cgcgaaaata ttccgctacg gttgtcgcca gttgcgccgc attgcagcga tcgaccgagg
    37741 ggaaatcgga agtggcaaaa accagcacgc atttttcttt cttatgcgaa gcgcgcaaca
    37801 tatccacgaa ttcagtgacc tcacggcctc gttcaccgat aagaccgata acaaagacat
    37861 ccgcctccgt ttgctcgatc agcatatgca tcagcatggt cttaccgcat cctgcggagg
    37921 caaaaatgcc cattcgctgg cctacgccac aggtcaataa cccgtcaatc gcgcgcacac
    37981 cggtaatcag cggttcacgg acgccaacgc gcgaagcgta agacggcggt gcgacatcaa
    38041 taacgcgttc ttcgctaatc ggcgccactt caggggtaaa acgctcaacg attttccctg
    38101 tcggatccaa caccgcgcct aatactgagt atcccaccca cgccgataac gcacgtccag
    38161 tgggataaag cacgacatcg cggctcagcc cctgggcatt gccgataagg ctcagcacgg
    38221 tgcgttcccg ctgtaagcca accacctgcg cacgtgcaac aacctgtttt tggtgccagc
    38281 cacggcgtat ttcacacagt tcgccaatgg ccacatcgcg caattccgcc tcaataattg
    38341 ggccggttat tttttgtggg taggccagat attgcagtaa acgaggtgtt ttcatctcat
    38401 tagcgaccga ctaaaaactt ccagatagtt gtaaaaccca ttcaaggcag tagagaactt
    38461 ttcaccgtca gataaaaaat ccggatgcac taaggcttta agcgttagct ccccattctg
    38521 ctcccccagt agtaattgcc cgccgcgggc aaaatggcat ccttccatta tggtcattaa
    38581 gatttcataa gcccgctgtt gtaataccac catgctgtca gcacccaatt gcgcccagat
    38641 ccatacatca tcgtccttga cgctgataca gatacttggc aatgcaaata aatccagaac
    38701 aattgttgaa tggctatcta ttcctccaat taatgaagga tcgcaaccac ttacttccag
    38761 tgcggaacga actaattcag cgatatccaa atgttgcata gatcttttcc ttaattaagc
    38821 ccttatattg tttttataac attcactgac ttgctatctg ctatctcacc gaaagataaa
    38881 acctccagat ccggaaaacg accttcaatc attttcttaa taaatcgacg gacatcgaca
    38941 gacgtaagga ggacaagatc tttatgtgca atcaataaat catccaactt aagtgtaatg
    39001 agatccatca aattagcgga ggcttccggg tcaaggctga ggaaggtact gccagaggtc
    39061 tgacggatcc ctttgcgaat aacatcctca acttcagcag ataccattac tgctcgtaat
    39121 tcgccgccat tggcgaattt atgacaaata taacgcgcca ttgctccacg aatatgctcc
    39181 acaaggttaa tgacatcttt ttctcttggc gcccacaatg cgagcgcttc cataattaat
    39241 ttcatattac gcacggaaac acgttcgctt aacaaacgct gcaaaacttc agatatacgt
    39301 tgtaccgtgg catgtctgag cacttcttta agtaaatcag gaaatttcgc ttccagttgg
    39361 tccagcatat gttttgtttc ctgaataccg aaatattcat tgacgttgcg cgccagcgtc
    39421 accgccagac agtggtaaag ctcatcaagc gcgttccgca acacatagcc aagctcccgg
    39481 agtttctccc cctcttcatg cgttacccag aaatactgac tgctaccttg ctgatggatt
    39541 gttggattaa tgccaaagga aacaacttca tcggaataat ttaccactcg catcaaatca
    39601 aaatagaccg taaattgttc aacacggatc tcattaatca acaatacgat gctgttatcg
    39661 tccaggccct cgccatcgcg taacaatact tccggcaggc gcacgccata atcaataaag
    39721 aactgactac gtaggcgctc cgcaagttga gctttttcca gatcttcacg ccggctcttc
    39781 ggcacaagta atatcaacgg tacagtctct gtagagactt tatcgagatc gccaatcagt
    39841 cctaacgacg acccttcttt ttcctcaata ctgagcggct gctcgccttt gctggtttta
    39901 ggtttggcgg cgctacgttt tgcttcacgg aatttaaaat agaagagtac gcttaaaacc
    39961 accgataaaa taacaaatac cggcagcggg aatcccggca gagttcccat tgaaatggtc
    40021 aaaatagccg taacaaccaa tacaaatggg ttgttcaaca gctgcgtcat gatattccgc
    40081 cccatattat cgctatcgcc atttacgcga gtcacgataa aaccggcact aatcgcaatc
    40141 aacaatgcgg ggatctgggc gacaagacca tcaccaatgg tcagcatggt ataagtagac
    40201 agagcggagg acaaatccat accatggcgg gtcatcccca ccgaaatacc gccaataaag
    40261 ttcacaaaga tgataatgat gccggcaata gcgtcacctt tgataaactt catcgcaccg
    40321 tcaaaggaac cgtaaagctg gctttccctt tccagtacgc ttcgccgttc gcgcgcagca
    40381 tccgcatcaa taataccggc cttcaaatcg gcatcaatac tcatctgttt accgggcata
    40441 ccatccagag aaaatcgggc cgcgacttcc gcgacgcgtt ctgaaccttt ggtaataacg
    40501 ataaactgga ccacggtgac aatagagaag acaacaaaac ccaccgccag gctatcgcca
    40561 ataacgaatt gcccgaacgt ggcgataatt tcaccggcat cggcttcaat caagataaga
    40621 cggctggtac tgatcgataa tgccagacga aagagcgtgg taattaacag taccgcagga
    40681 aacgttgaaa aactgaggat tctgtcaatg tagaacgacc ccataaacac caatatcgcc
    40741 agtacgatat tcagtgcgat caggaaatca accagatagg taggtaatgg aatgacgaac
    40801 atagaaatga tcatcaccat tagtaccaga atcagtaatt caggtcgtaa acgagcactg
    40861 ttaagtagag aaagcagcac tataggtatc ctgttaatat taaattaaga cagcttttca
    40921 atagtacgac gctgttctgc catttcatgc ttgtaggcaa tatcggtcat actacgtaac
    40981 gccattaaca attcttcctg ccaatattct tcataaaaga gtgaagaggg tatggcttta
    41041 catacttgat aaaatatctg caaaaaggat gcatgttctt tatgactaag caataacgca
    41101 ttcaaaccta taatatcggc taacagcgaa tccacttcat gtggctgttg caatagcgaa
    41161 agcatcagta gtagccacga cgactcctcc gcattaaacg ctttggtaaa cgaatacgac
    41221 aacaatgtac tcacaaacag taggtcagcg gagcgcaaca ttttaagttg cgtcaggcgt
    41281 cgtaaaagct ggccaaactc caggcgcgaa cagctggcgt cattcgcgtc aatatcggtt
    41341 aatagcgaac cctcgataaa atccagtacc accagtcgac gttgatagcc ataactggct
    41401 atccagtcag agtaaatctc cacttcatgt gattcactct ggataaattg ccgatagctg
    41461 gcgcgcaata agcctggttt taacgataat gttttcccaa aaagccgggc cttcaacgca
    41521 caattaatcc ctgccttgag ggtcttcgga tcggtttgct cttcaacgtg cttaagtaac
    41581 gactccagct ttttccgcac gatctcttcc aggtctttac gacgaagcaa ttcgcgtaac
    41641 acaaggacta aatcactggg gtcaggaaat aagctacgcg cctgacgtaa aaaatcttct
    41701 aacgcgccgc catgtacgct aattagcttt aatatttgct tcgccttcgg taaagcctca
    41761 tcctccagca cgcgttcaaa actgttagat aaattactgg attttttttc ataatcgcga
    41821 cggttacgaa attgcgccag cgccgctgac atttcgtccg tcgactggac aaatttttgt
    41881 acttccgccc ctggagacga atcctctgcg gcctgttgta tttccgcctg ttgcgcatca
    41941 gtatgttggg tcgcatcctg atgagatgcc tgccgggaca atattctgga aaatgaaata
    42001 ccagaggttg agccaggaat catttaatta cctcctgacc tctatccaga taaacacgaa
    42061 cccatttctg taacttatcg tccccactcc aggcaccgct ttgcttcaga atattgttta
    42121 ccgattcgct ggcatccggc gttaacgggt cgacaatttc ttttggttca atcatgaaca
    42181 cacgaacaac attactttta ttcttactgg aataacggaa caggctacca ataagcggta
    42241 atttgcctaa aaccggaata ctttggacag tatcggtatt tgcatcccgt gtataaccac
    42301 cgaccagcaa actttttccg tgcggaactc ttgcaatagt gctaattaac gttcgcccga
    42361 cttcgggtaa cgcatctacg gaggtggtag tatcggattg cggcgtctta tcgttgccat
    42421 cttcaatgtc cagcgacatt tctatctgac catctgcgga aaaacggggc agcactcgga
    42481 tcattgttcc gtatgttaca tgctcaagcg ccacattacg ttccccaatc agcttggtgt
    42541 aaaacgttct gttgttatca aaaatagcgg gaacattttc ctgagtcagt aataccggac
    42601 gcgaaaccac cgtcgcctgt ttcttctctt ctaacgcatt gaccgcggcg atgaatcgac
    42661 tgccatcgag ggtacttatt gaagactggt ttaatgacac gccaagtttg tccccaatag
    42721 ttatgctgcc gctccatgaa gtgcccaaac gctccagatc gcttttatta agatcgacaa
    42781 tccacaggga taattctacg tgacgtttgg cgacatccag cgctttaacc agcatttcga
    42841 taaaatgcac ctgcccagcc gttcccttta ctaacaaact gttggtatcc ggataggcca
    42901 cgattttaat attgcccgcc gcggcatttt gctttaaagc ttcctgcaga ctcatgccac
    42961 cggcataatt tgctgcttta cctttttctc cattcgctga aaatgctggc atcgccgggg
    43021 gttcgctact gacaatatta cctaagggtt gctcttctcc ctgcaataac ctttcaatgg
    43081 ccgtagcaat accgggaata accattttct gatcgcgcag attgtaggta cgatcgccca
    43141 cgaaggtatt gttcagacgc atcaccccta ttttctggcg tcccagctca ataccatcgt
    43201 tttgcttgtc catcatggtg gcggcgttga ccaccatatc aacatagacg ggtggccctg
    43261 aaacatagaa tgttccttta cggttatcgc cacgtagcgg gtaatttttg ttatataaac
    43321 ctgagcgttt tagaaaattg ttgaactcat tgagtgagac gttgcgtaaa gaaaccacgg
    43381 cattgcgcat ttcactggcg tcataaatat agatagcctg cccatcgaaa taccaaatca
    43441 gccccagttg tagggaaagc ttctccagta atgcgttagg atcgtgaaac tcaaagttgc
    43501 ccgtaatttt ttttcgtgcc gccattttgc taacaatgac aggctccttt agctgtagcg
    43561 ccatggcatc gaaaaatgtc cgcaggctat cgtctttcgc aacaaaccca cttcccgtta
    43621 caggtatttt ttcactagaa taaccaggtg caaccagaac aagcgcggca catgccagca
    43681 ctctggccaa aagaatatgt gtcttcattt gtctgccaat tgaataatat ttgataattt
    43741 ccgcggcgaa acgccgatca gctctttgat ctcactagaa aaatgtgaag gcgatgagta
    43801 accatgatta acggctaatt gggtgatgtt ctcgtggcct tctacactat tcagcagcga
    43861 ttgcgccata cgccagtttc gtaattcact cttcgctttt ccgcccaacg ctctgctgca
    43921 caaacgacga aaatgggtat aagaaacgcc atagtcttct cccagcattc tcatcgtgtt
    43981 gccgctggtt gactgagcga gtaaatagcc aaccaaccag taactctcgc tttttcgtaa
    44041 cagcgccagt accttattga aggccggaga aggcgtaata atttgctgca aaaaccagta
    44101 ctcgcagcgt ttacgatctt gccaaatagc gcgaaactca ggactcagca aaacccattt
    44161 atcggattca gcatatgtcg tgtccactaa tcctgcgcca tcgataaatg ccagtaattt
    44221 gctgagtact tcaattttta acggtcgaaa aaccaggtct cctgatactg gtgcgacaac
    44281 ggcctgctcg caaaaaagca gcgcgccttc ctgaatcagg cagttttcat tgtgtcggct
    44341 ttcagaaaat gacatatgca gcttttgcgc ggaacacgtc tgtataaacc atgcttccgg
    44401 gctgcggatt ttccgcttct ctccttcttt aagtacttcc tgcgtattta gcattgttgt
    44461 cagcaccagt taaaaatcat tttaatatgt aaacaatacc aggagcgggt ggcaaaatcc
    44521 tgatgcaatc attatgaaac tgatgccacc cgctaattaa attagccaac ttgcacagcg
    44581 cttgctgatt taaaatagaa aatcagctca tagtatacaa attatggctt attgttctac
    44641 agcagcaaaa attcagatat tgtcatcggg atggagaatt aattatttat atcaggagtt
    44701 ttttttgcta gcattcctga aacgcattcg ccccttatca ctattgtcag ataacattct
    44761 gacggttgtg taaaaacatg gcgcctcatt cttctgtagt tggagttaat atgaaaaaat
    44821 tttatagctg tcttcctgtc tttttactga tcggctgtgc ccaggtgccc ctcccttcct
    44881 ccgtgagcaa accggtacag caacctggcg ctcagaaaga gcaactggcc aacgcaaata
    44941 gtattgatga gtgtcagtct cttccgtatg tgccgtcaga ccttgcgaag aataaatcat
    45001 tatcaaacca gaacgctgat aattccgcat caaaaaatag cgcaatcagc tcaagcattt
    45061 tttgcgaaaa atataaacaa accaaagaac aggcgcttac cttcttccag gaacatccac
    45121 aatacatgcg ttcgaaagaa gatgaagagc aactcatgac cgaatttaaa aaagttctac
    45181 ttgaacccgg aagtaagaat ttaagcatat atcagacgtt acttgctgcc catgaaagac
    45241 tgcaagcctt ataaggccat atcaccgctg actgaactca tcatgatata attaagacca
    45301 tactttgcat tgccacttaa tatcaatata attattatag ctatggtcac ttttacggtt
    45361 ggccatttgt ctcttacgtt gcatttatca atctgctttt tgatacagca gcacctcgct
    45421 gctgcttttt ttatttgtga taaagaacgg cctcccaaac tcgggaaaat agccgaaact
    45481 tatactgata aactatcgtc tcgtatatcg cgataaactg acatccccct cttgccccac
    45541 atgttggcat tcttacgata ccccatccac ttttcgcgga taacgttctt ttgaacttac
    45601 ccagcaatag tggacacaca actaagtgag taaacgctca agcaagaggt gactcacata
    45661 acaaaaccag catcaaccac caaaaagcca cgcaagcagc acacgcctga atttcgtcag
    45721 gaagccctga aactggcgga acgcattggg gtgcccgctg ccgcccgtga gcttaacctg
    45781 tataaatcac agctctacag ctggcgaagc aaacagcaaa ctcagctctc ttcttctgaa
    45841 cgtgagcagg agatgtccgc cgcttagggt tgtgtccata ctacgcgggt aggatcaatc
    45901 aagcagttac ggcaaaaaag agaatcatga atatatttag caaactccct gatgatacgt
    45961 aatcagtgag attaaaataa tgcaatcgcg ataaaccgaa gttaatgccc tgtttaaaga
    46021 cagtgaacga ccttcttgcc atgtctggac tatatcagcc tcacatgtac gctttgaaag
    46081 cgtacagata tgtattataa ttgtacatat tgttcataaa caggaggatg aaaaccatgc
    46141 ctcagatagc tatagaatct aacgaaagat tgtcgttacg tgtatcgacg gatgccaaaa
    46201 agttgatagt ccgcgctgcg gcaatccagc aaaccaacct gacggatttt gtggtcagta
    46261 acgtactacc tgtcgcacag aagattgttg atgccgccga acgggtatat ctgacggagc
    46321 gtgatactca aatgatcatg gaaattttag ataacccgcc agcgccgaat gaaaagcttc
    46381 ttgccgctgc tttcgccctg ccggacatga agaaatgatg tttacagact ggcatgaggc
    46441 cgcgataggg aaaacccaca atcgaatgaa ttttgattgt ggggatgccg atctgaacca
    46501 attcctgcaa cgccatgcac gacaaaatca tgagaaaggg acaacaaaaa cctacgttgc
    46561 gcttgataat tcggatgtta cacgtatcca cggcttttac tcagtcagtc ctgcatcact
    46621 gatatatgca caggttcccg gcgcaatcag caaaggatta gggagatatg atgtgccagt
    46681 gtttcgtctg ggtcgtttag ccgtagacaa atctatgcag gggcaagggc tgggagcaca
    46741 acttttgtta tctgccggaa agcgttgcat acaggcggct ttgcaggtcg gtggcgtagc
    46801 cctgcttatt gatgccaaaa ataaacaggt ctgcgactgg tacaaaggat ttggcgcagt
    46861 accattaaac gatcaacccc tttccttgtt gctgtcgttt aaaacgcttt atgctgcttt
    46921 atctgcatct ggtaggttat gacaacatga ggctttgttg aataattcag aatcggccaa
    46981 cgataaggat acaggactcc caccggagca ctcgttatac gagcctgacg ctggtcagca
    47041 ttgccaacaa cgtcatccgg ttcagcgctt tgaccatcgc catcgccatc gcttcaccca
    47101 cctgcgcgtc atagttccgc aggctcagat ggccgcccag caaggttttg agacggaaca
    47161 tcgctgtttc cactactgaa caacggtgat agcccacttt cttttccaga cctcattgct
    47221 gccgctcaga tgttgattcg ccaccgcgtg gttacgctca tggtacttgc ccggccagta
    47281 tcgcgcaccg cttcgtggcg ggattagcgg cctgattaat aacacatcat ggcaatagcg
    47341 cgtgtcataa gcgccgtcag ccgaggcttc cctgatttta cggtgagtct ggctaatcag
    47401 ccccggcagt gcctgcgcat ctgtcgtgcc gctgagcggg aaagtatgcc tttgcaatta
    47461 atcaggaaag tgttgcgcga gaaatagcgc atctttcaag cacatcgtct actttaatta
    47521 accgattcat aaaatatata ttatctgttc atttctagct tgtaggctat tttaataact
    47581 gtgtatttta aacaataaaa attaatatta ccctacttct ttgttataat accagcctcc
    47641 aaaattgtgc tataggaaca tcatggaatt aattcgttat gctgacatca acagcgttct
    47701 ctatcgccac atttgggtcg ttggtgatat tcatggatgt tactccttat tgttaaccag
    47761 actggctcaa ttaaatttct ctcctgatac cgatctcttg atctccactg gagataacat
    47821 tgatcgagga aaagaaaacc ttgaaacact gagactgtta aatacctcat ggtttatttc
    47881 tgtagtgggt aatcatgaag ctatggcgct tgacgctttt gaaacacagg atggcaattt
    47941 ctggtatgta aacggtggtt actggtacga ctcggtcacc caaaaagaca ggcaagaagc
    48001 cactgagcta ttactaactt ttaagcagcg tcctcacatc atagaggtta aaacgtcctc
    48061 aaagaagtac gtgattgccc atgccgatta tccagatgac agctacgatt atgggaagca
    48121 agttgatatt gatagcgttc tatggtcacg cgatcgtctg cttagttcgt tacaggggaa
    48181 tatccatcca atacgcggtg cggatacttt catcttcggc catatgattg ttgattacac
    48241 aacaacattc gccaatcaaa tctacattga caccggttct ttctgttcag gcaatctgtc
    48301 tttttttaaa ataaagtagt ctggaaatag aattatataa tattaaccct ccctgcatta
    48361 tggcaatgat atagccttca ataagtacca ttgctcattc gtaatagcgt ctaaatttcg
    48421 cgtttttccg cccatttcat cattaagatc gcagaccaaa aaacgaagcc gtaatccgac
    48481 gcaggtagtt actcgatcgc ctgagaagag taaagatcgc acagctcaag atacctatcg
    48541 gaataaagca caataaccgt ggtggcgaaa tggatcggct tgccttcatg caacacaatc
    48601 ttgattacgg tcttgagttc ggaagcatcc gtttccctct taattttgtt gtgatttctc
    48661 tttgttgcga acatggtctg aactaattgc ctgcagattg ccttgtttcg tcaatatttg
    48721 gaaaatcgaa cacattttca acttttactt tcaagacaga acttggcttc ctaccctcac
    48781 tgacattacg atctgacgag gctactcttc gctggattac gtaggttttt ttcgtcaaac
    48841 tggcttttac cccgaaacca gcaggagctt gtctgtggtc atcgaaaaca atgtagagtt
    48901 tttgagctgg gttagcttcg aaaacgattt ttccagagcg actgagcgca gacttaacat
    48961 tgatacttaa cttgttgata atgaaaggct ggctgagagt tgttttcaaa gtatcacccc
    49021 tgttgtagtc caggaatgat gagaatgtaa cctgtcacat tttaggctac agatgagcta
    49081 caaatttatg ggtttatgtg agtttatagg ggttttacct atggccacat gagcacttga
    49141 aagaataaaa aacgagtaaa atcaatatga atgagtcatt tgataaggac ttctccaacc
    49201 acacccccat gatgcagcag tatctcaagc tgaaagccca gcatccggag atcctgctct
    49261 tttatcgtat gggagacttt tacgagctgt tttatgacga cgcaaagcgt gcgtcgcagt
    49321 tgctcgatat ttcgctgacc aaacgcggcg catcggctgg cgaacctatc cctatggcgg
    49381 gtatcccgca ccacgccgta gaaaactacc tcgcgaaact ggtcaatcag ggcgaatccg
    49441 tcgctatttg cgaacagatt ggcgatccgg ccaccagcaa aggtcccgtt gaacgtaaag
    49501 tcgtgcgtat cgttacgcct ggcaccatca gcgatgaagc cctgttacag gagcgtcagg
    49561 ataacctgct ggcggctatc tggcaggatg gtaaaggcta cggttacgcc acgctggata
    49621 tcagctccgg gcgctttcgt ctgagcgaac ccgccgaccg tgaaacgatg gccgcagagc
    49681 tgcagcgcac caatcccgcc gaactgttgt atgccgaaga ttttgctgaa atggcgttaa
    49741 tagagggacg ccggggtctg cgccgtcgcc cgttgtggga gtttgagatt gataccgccc
    49801 gccagcagtt aaatctgcaa ttcggtacgc gggatctggt cggtttcggc gtcgaaaatg
    49861 cctcgcgtgg attatgtgcg gcaggctgcc tgttacagta cgtaaaagat acccagcgca
    49921 cctccctgcc gcatattcgt tccattacga tggaacgcca gcaggacagc atcattatgg
    49981 atgccgcgac ccgccgcaat ctggaaatta cccagaacct ggccggcggt gtcgaaaata
    50041 ccctcgccgc ggtgcttgac tgtaccgtga cgccaatggg tagccgaatg cttaaacgct
    50101 ggctgcatat gccggtacga aataccgaca tattacgtga acgccagcag accatcggcg
    50161 ccttgcagga taccgtcagc gaactgcaac cggtgctgc
//
LOCUS       DAGWFR010000012        50079 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.012, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000012 DAGWFR010000000
VERSION     DAGWFR010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 50079)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 50079)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..50079
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.012"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..282)
                     /gene="dnaA"
                     /locus_tag="MOX77_000823"
     CDS             complement(<1..282)
                     /gene="dnaA"
                     /locus_tag="MOX77_000823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462738.1"
                     /note="binds to the dnaA-box as an ATP-bound complex at
                     the origin of replication during the initiation of
                     chromosomal replication; can also affect transcription of
                     multiple genes including itself; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HCA3356448.1"
                     /translation="MSLSLWQQCLARLQDELPATEFSMWIRPLQAELSDNTLALYAPN
                     RFVLDWVRDKYLNNINGLLNTFCGADAPQLRFEVGTKPVTQTLKTPVHNV"
     gene            943..1083
                     /gene="rpmH"
                     /locus_tag="MOX77_000824"
     CDS             943..1083
                     /gene="rpmH"
                     /locus_tag="MOX77_000824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001686914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HCA3356449.1"
                     /translation="MKRTFQPSVLKRNRSHGFRARMATKNGRQVLARRRAKGRARLTV
                     SK"
     gene            1100..1459
                     /gene="rnpA"
                     /locus_tag="MOX77_000825"
     CDS             1100..1459
                     /gene="rnpA"
                     /locus_tag="MOX77_000825"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014172301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HCA3356450.1"
                     /translation="MVKLAFPRELRLLTPAHFTFVFQQPQRAGTPQITILGRLNSLGH
                     PRIGLTVAKKNVRRAHERNRIKRLTRESFRLRQHELPAMDFVVVAKKGVADLDNRALS
                     EALEKLWRRHCRLARGS"
     gene            1423..1680
                     /gene="yidD"
                     /locus_tag="MOX77_000826"
     CDS             1423..1680
                     /gene="yidD"
                     /locus_tag="MOX77_000826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HCA3356451.1"
                     /translation="MAPPLSPGSRVLIALIRVYQRLISPLLGPHCRFTPTCSSYGIEA
                     LRRFGVIKGSWLTVKRVLKCHPLHPGGDDPVPPGPFDTREH"
     gene            1683..3329
                     /gene="yidC"
                     /locus_tag="MOX77_000827"
     CDS             1683..3329
                     /gene="yidC"
                     /locus_tag="MOX77_000827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HCA3356452.1"
                     /translation="MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQTQQTMQTTTTAA
                     GSAADQGVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLLET
                     TPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTDAAGNT
                     FTKTFVFKRGDYAVNVNYSVQNTGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTF
                     RGAAYSTPDEKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNNFYT
                     ANLGNGIVAIGYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAVAPHLDLTVDYGWLW
                     FISQPLFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQA
                     MRERLGDDKQRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAP
                     FALWIHDLSAQDPYYILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLW
                     FPSGLVLYYIVSNLVTIIQQQLIYRGLEKRGLHSREKKKS"
     gene            3471..4835
                     /gene="mnmE"
                     /locus_tag="MOX77_000828"
     CDS             3471..4835
                     /gene="mnmE"
                     /locus_tag="MOX77_000828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HCA3356453.1"
                     /translation="MSHNDTIVAQATPPGRGGVGILRISGLKARDVAQEVLGKLPKPR
                     YADYLPFKDVDGSALDQGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLKRILTLPG
                     VRIARPGEFSERAFLNDKLDLAQAEAIADLIDASSEQAARSALNSLQGAFSARVNHLV
                     EALTHLRIYVEAAIDFPDEEIDFLSDGKIEAQLNGVIADLDAVRTEARQGSLLREGMK
                     VVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRD
                     ANDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPADIWPDFIARLPKNLPITVVR
                     NKADITGETLGISEVNGHSLVRLSARTGEGVDVLRNHLKQSMGFDTNMEGGFLARRRH
                     LQALAEAANHLEQGKAQLLGAWAGELLAEELRLAQQSLSEITGEFTSDDLLGRIFSSF
                     CIGK"
     gene            5018..6205
                     /locus_tag="MOX77_000829"
     CDS             5018..6205
                     /locus_tag="MOX77_000829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001608974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3356454.1"
                     /translation="MKRFLLCSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAF
                     SVYLAGMATAMLFAGKIADQSGRKPVAIVGAIVFMMASLLCSRASEGSLFLSGRFLQG
                     VGAGGCYVVAFAILRDTLDEHRRAKVLSLLNGITCIVPVLAPVMGHLIMLRFPWQSLF
                     YTMSTMGIMVGLLSLFILRETRPARLAPRDLSPSSSAAESLVNRFFVSRLAITTLSVS
                     VILTFVNASPVLLMEVMGFSRGDYAITMALTAGVSMVVSFSTPFALGLFKPRTLMLVS
                     QGLFLTAGVTLSLAHTNTVTLFGLTLICAGFSVGFGVAMSQALGPFSLRAGVASSTLG
                     IAQVCGSSLWIWLAAILGISAMNMLIGILIGCSIVSILLIFSVAPNRSVAEHEEIPYQ
                     SRS"
     gene            6174..7133
                     /gene="yidZ"
                     /locus_tag="MOX77_000830"
     CDS             6174..7133
                     /gene="yidZ"
                     /locus_tag="MOX77_000830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator YidZ"
                     /protein_id="HCA3356455.1"
                     /translation="MKKSLTSLDLNLLLCLQLLMQERSVTKAAKRMNVTPSAVSKSLA
                     KLRAWFDDPLFVNTPLGLAPTPLMVSMEQSLADWMQMGNQLLDKPHHQTPRGLKFELA
                     AESPLMMIMFNSLSQQIYQRYPQATIKVRNWDYDSLEAITRGKVDIGFTGRESHPRSR
                     ELISLLPLAIDFEVLFSDLPWVWLQEDHPALREAWDLDTFLRYPHISICWEQSDTWAL
                     DDVLQEMGRKRHIALSLPGFEQSLFMAAQPGHTLIATAPRYCQHYNQLHQLPLVARPL
                     PFDAQQREKLMVPFTLLWHKRNSHNPKIVWLRQAINTLCRRLI"
     gene            7291..8046
                     /locus_tag="MOX77_000831"
     CDS             7291..8046
                     /locus_tag="MOX77_000831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4'-phosphopantetheinyl transferase superfamily
                     protein"
                     /protein_id="HCA3356456.1"
                     /translation="MATHFARGILTEGQLVSIRLSSSCHIEARNLPAHRRTHFLASRG
                     LLAELMFMLYGISELPEIIIQAKGKPAFRDKNLPGFSISYAGNMVGVALTTEGECGLD
                     MELQRTSRGFHHPHSLERHPFSRNENLWVANQNDPNEARAQLITLRQSVLKLTGDVMN
                     DDPRELQLLPVAGRLKCAHVTQLEAVCDAEDVLVWSVTVTPAIEKLKVWEFDGKLGWK
                     SLPDIQTRANEPTGRLMRFAQLPAAKSYTLNRS"
     gene            8046..8630
                     /locus_tag="MOX77_000832"
     CDS             8046..8630
                     /locus_tag="MOX77_000832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462749.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HCA3356457.1"
                     /translation="MKKGARMSEMLNVVTLLGSLRKGSFNGMVARTLPKVAPAGMTVS
                     PLPSIGDIPLYDADIQQEEGFPASVEALAEQIRNADGVVIVTPEYNYSVPGGLKNAID
                     WLSRLPEQPLAGKPVLIQTSSMGAIGGARCQYHLRQILVFLDAMVMNKPEFMGGVIQN
                     KVDPQTGEVVDQGTLDHLTGQLTAFGEYIQRVKA"
     gene            complement(8675..10012)
                     /gene="adeP"
                     /locus_tag="MOX77_000833"
     CDS             complement(8675..10012)
                     /gene="adeP"
                     /locus_tag="MOX77_000833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine permease AdeP"
                     /protein_id="HCA3356458.1"
                     /translation="MSQQHTTQASGQGMLERVFKLREHGTTARTEVIAGFTTFLTMVY
                     IVFVNPQILGVAGMDTSAVFVTTCLIAAFGSILMGLFANLPVALAPAMGLNAFFAFVV
                     VQAMGLPWQVGMGAIFWGAVGLLLLTIFRVRYWMIANIPVSLRVGITSGIGLFIGMMG
                     LKNAGVIVANPETLVSIGNLTSHSVLLGVLGFFIIAILASRNIHAAVLVSIIVTTLLG
                     WIMGDVHYNGIVSAPPSVTSVVGHVDLAGSFNLGLAGVIFSFMLVNLFDSSGTLIGVT
                     DKAGLADEKGKFPRMKQALFVDSISSVTGAFVGTSSVTAYIESSSGVSVGGRTGLTAV
                     VVGILFLLVIFLSPLAGMVPPYAAAGALIYVGVLMTSSLARVNWQDLTESVPAFITAV
                     MMPFSFSITEGIALGFISYCVMKIGTGRLRDLSPCVVIVALLFVLKIVFIDAH"
     gene            10181..10846
                     /gene="yieH"
                     /locus_tag="MOX77_000834"
     CDS             10181..10846
                     /gene="yieH"
                     /locus_tag="MOX77_000834"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconate phosphatase"
                     /protein_id="HCA3356459.1"
                     /translation="MSQIEAVFFDCDGTLVDSEVICSRAYVTMFRQFGITLELTEVFR
                     RFKGVKLYEIIDTISKEHGVALAKAELEPVYRAEVARLFDTELEAIAGTNTLLESIKT
                     PMCVVSNGPVSKMQHSLGKLGMLHHFPDLLFSGYDIQRWKPDPALMLHAANAMKVNVE
                     KCILVDDSSAGAQSGIAAGMEVFYFCADPHNKPIDHPNVTTFTDLAQLPGLWKARGWK
                     ITR"
     gene            complement(10941..11666)
                     /gene="phoU"
                     /locus_tag="MOX77_000835"
     CDS             complement(10941..11666)
                     /gene="phoU"
                     /locus_tag="MOX77_000835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HCA3356460.1"
                     /translation="MDSLNLNKHISGQFNAELESIRTQVMTMGGMVEQQLSDAITAMH
                     NQDSELAKRVVEGDHQVNMMEVAIDEACVRIIAKRQPTASDLRLVMAIIKTIAELERI
                     GDVADKICRTALEKFSQQHQPLLVSLESLGRHTVQMLHDVLDAFARMDLDEAVRIYRE
                     DKKVDQEYEGIVRQLMTYMMEDSRTIPSVLTALFCARSIERIGDRCQNICEYIFYFVK
                     GQDFRHVGGDELDKLLAGKDPKE"
     gene            complement(11681..12454)
                     /gene="pstB"
                     /locus_tag="MOX77_000836"
     CDS             complement(11681..12454)
                     /gene="pstB"
                     /locus_tag="MOX77_000836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000063125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HCA3356461.1"
                     /translation="MSMVETAPSKIQVRDLNFYYGKFHALKNINLDIAKNQVTAFIGP
                     SGCGKSTLLRTFNKMYSLYPEQRAEGEILLDGDNILTNTQDIALLRAKVGMVFQKPTP
                     FPMSIYDNIAFGVRLFEKLSRADMDERVQWALTKAALWNETKDKLHQSGYSLSGGQQQ
                     RLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARC
                     SDHTAFMYLGELIEFSNTDDLFTKPAKKQTEDYITGRYG"
     gene            complement(12541..13431)
                     /gene="pstA"
                     /locus_tag="MOX77_000837"
     CDS             complement(12541..13431)
                     /gene="pstA"
                     /locus_tag="MOX77_000837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HCA3356462.1"
                     /translation="MATLDMQNTAQLAEFRRKMQARRRMKNRIALTLSMATMAFGLFW
                     LIWILMSTITRGIDGMSLALFTEMTPPPNTAGGGLANALAGSGLLILWATVLGTPLGI
                     MAGIYLAEYGRKSWLAEIIRFINDILLSAPSIVVGLFVYTIVVAQMQHFSGWAGVIAL
                     ALLQVPIVIRTTENMLKLVPDSLREAAYALGTPKWKMISAITLKASISGIMTGILLAI
                     ARIAGETAPLLFTALSNQFWSTDMMQPIANLPVTIFKFAMSPFAEWQQLAWAGVLIIT
                     LCVLLLNILARVVFAKKKHG"
     gene            complement(13431..14390)
                     /gene="pstC"
                     /locus_tag="MOX77_000838"
     CDS             complement(13431..14390)
                     /gene="pstC"
                     /locus_tag="MOX77_000838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008806729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstC"
                     /protein_id="HCA3356463.1"
                     /translation="MAATKPAFNPPGKKGDMIFSALVKLAALIVLLMLGGIIVSLIIS
                     SWPSIQKFGFSFLWTKEWDAPNDIYGALVPIYGTLVTSFIALLIAVPVSFGIALFLTE
                     LAPGWLKRPLGIAIELLAAIPSIVYGMWGLFIFAPLFATYFQEPVGNILSNIPFVGAL
                     FSGPAFGIGILAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRI
                     VLPFTKNGVIGGIMLGLGRALGETMAVTFIIGNTYQLDSASLYMPGNSITSALANEFA
                     EAESGLHVAALMELGLILFVITFIVLAASKFMIMRLAKNEGAR"
     gene            complement(14526..15566)
                     /gene="pstS"
                     /locus_tag="MOX77_000839"
     CDS             complement(14526..15566)
                     /gene="pstS"
                     /locus_tag="MOX77_000839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HCA3356464.1"
                     /translation="MKVMRTTVATVVAATLSMSAFSAFAAASLTGAGATFPAPVYAKW
                     ADTYQKETGNKVNYQGIGSSGGVKQITANTVDFGASDAPLSDEKLNQEGLFQFPTVIG
                     GVVLAVNIPGLKSGELVLDGKTLGDIYLGKIKKWDDEAITKLNPGVKLPSQNIAVVRR
                     ADGSGTSFVFTSYLAKVNDEWKSKVGAGSTVNWPTGLGGKGNDGIAAFVQRLPGAIGY
                     VEYAYAKQNNLAYTKLVSADGKPVSPTEESFSNAAKGADWSKTFAQDLTNQKGDDVWP
                     ITSTTFILVHKAQKKPEQGAEVLKFFDWAYKNGAKQANDLDYASLPDNVVDQVRTAWK
                     TSIKDSNGKALY"
     gene            complement(15732..17105)
                     /locus_tag="MOX77_000840"
     CDS             complement(15732..17105)
                     /locus_tag="MOX77_000840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
                     /protein_id="HCA3356465.1"
                     /translation="MTKKIVAVTACPTGVAHAFMAAEALEIEARKRGDWIKVETRGSV
                     GAKNTLTAEEIAQADVVIIAADIELDLSGFVGKRLYRTSTGAALKKSAQEMDNAFNSA
                     EVYQGSAGRSSSAGKTELPGVYKHLMTGVSHMLPLVVAGGLCIALSFVFGIQAFNEPG
                     TLAAALFQIGGKAAFALMVPVLAGFIAFSIADRPGLAPGLIGGMLASLCGAGFLGGIV
                     AGFLAGYSVRFLAQNIKLPASMEALKPVLVLPLLSTLITGLIMIYVVGGPVSAVMEGL
                     TTFLGNMTSTNAILLGMLLGAMQGFDLGGPVNKAAYTFGVGLLASHSYMPMAAIMAAG
                     MVPALGMGVATWAARAKFTASEHEAGNASFILGLCFISEGAIPFAARDPMRVIPSTMV
                     GGAIAGGLSMYFGCTLMAPHGGLFVLAIPHAVEHVMQYLLSIALGTIVCGLMYALLKP
                     SAVAQTV"
     gene            complement(17154..17924)
                     /locus_tag="MOX77_000841"
     CDS             complement(17154..17924)
                     /locus_tag="MOX77_000841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate 5-dehydrogenase"
                     /protein_id="HCA3356466.1"
                     /translation="MTKRINKDTQVCMSLAARPSNFGTRFHNYLYEALDLNYLYKAFS
                     PTDLTQAISGVRGLGIRGCAISMPFKEACIPLVDELDASAKAYNTDYIAIARLLANYK
                     VSPDQVFALRGSGGMAKAVACALKDAGFTRGYIVAIDEASGKQLAELYGYEWRPDTDG
                     IEADLLINATPIGMAGGNDADKLSYSEQEVDKASVIFDVVALPPVTPLIRYARERGKT
                     VIIGSEVFAIQAVEQFVLYTGIRPDDALFQKAAAWSRL"
     gene            18019..19776
                     /locus_tag="MOX77_000842"
     CDS             18019..19776
                     /locus_tag="MOX77_000842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SgrR family transcriptional regulator"
                     /protein_id="HCA3356467.1"
                     /translation="MATRHTEQKYLKLLQHYGDKPVSVTLQELADVLFCTRRHMRNLL
                     LQMQEAKWLIWQSQAGRGHRARLHLRYKPEQLLSEKAEQLLESGHVDQAIQLLGKNKH
                     QVAQLLRSKLGYSVRADYQRLCIPYYRTMPSLCPGIPLRRSEQHLVRQIFSGLTRINE
                     EKGEVEADLAHHWRQIDPLRWRFYLRPAVLWHDGQELTIDAVIASLTRSAKLPLFSHL
                     QTIQATGPLSLEITLAHPDNRLPLLLSHIDAMILPPDHTQRADFPAHPVGTGPYEVVE
                     NNGFHLQMKAFDHYFGLRGLLDEVEVFIWPNLTETDNLAESLSDNDTAAWLSSSLSDE
                     DYVSGRLSQVSGKPSDNLREMFLERGGYFLLCDSRSPHWHTAEHRRWLRETLSPYALL
                     QHLSEAIRPFWVPGGSLLSSWFHTIEAGPACSPFISSSPYAKLRLAYHDQHPEFPMLL
                     DIMQEIMRQQGILLEGVELNYDDWANGKTNVDLWLGTVNFPIPEEWNVGTWLLGSPLL
                     RHAISGGDDALLAQWETQWHAETISAEQLVRETTRSGWLQPLFHHWMRLKSPDRARGI
                     HLNNLGWFDFRSTWIEPGP"
     gene            complement(19807..20874)
                     /gene="stgD"
                     /locus_tag="MOX77_000843"
     CDS             complement(19807..20874)
                     /gene="stgD"
                     /locus_tag="MOX77_000843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001241930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein StgD"
                     /protein_id="HCA3356468.1"
                     /translation="MRLWTIILFSCFMVLISPVCRAGDGICHAVKGTYIYNLNLNDAR
                     IPAEKNKAGTEVRDLETLTSSESYKVGCSCLTHFSSTFREVYYTARSPLSIDTTRNGY
                     TYYTLNDNLSIATSIAVLGRGFIAVPFEAEPNVVKDGMNCYTDTVEGNLATLYTGSEV
                     KVSFLINKPFVGQVAIPGTIVANLYGGLDASSSTASTDKLAEVRIVGDIVAPQSCEID
                     SGQVIEVNFGKIPVADFSTTQGTAAAGHKVTKTVQVKCTGMLDENIVYSTFNADPVDS
                     SANMMKVLGNDDVGIMIYDKWDRMVKVTGGKMDMDMGVNNGGAETNSLTFSAAPASAT
                     GARPQPGTFEAYATITLEITN"
     gene            complement(20886..23420)
                     /locus_tag="MOX77_000844"
                     /pseudo
     CDS             complement(20886..23420)
                     /locus_tag="MOX77_000844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000258936.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial biogenesis outer membrane usher
                     protein"
     gene            complement(23442..24140)
                     /locus_tag="MOX77_000845"
     CDS             complement(23442..24140)
                     /locus_tag="MOX77_000845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010989263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial chaperone"
                     /protein_id="HCA3356469.1"
                     /translation="MSLSMFARGIKIVILALLCLNLPSAFAGIVVGGTRVIFHGNDPD
                     STISIYNKEVDLPYLIQVWVDPFSKDDKSKPPFTVIPPVSRLEPSQEKVLRIIKTAGE
                     LPKDRESVFWFNVKNIPPSSKNKDSSTLEIAIKTRIKLFWRPASITLIPEKAVAKVKW
                     YRQGSKLVVENNSPIHMNIMDVSVDGKDVPLNMIKPFEKLTLDLPTGVTGHALAWRFI
                     NDYGAISSPVKQAL"
     gene            complement(24238..24813)
                     /locus_tag="MOX77_000846"
     CDS             complement(24238..24813)
                     /locus_tag="MOX77_000846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000804045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HCA3356470.1"
                     /translation="MKLNLIASALVLSSTMLVGNAMASDGTVHFLGEVVDSTCQVTPQ
                     TADQNVNLGKVNKTAFAGVGSTAAPTEFHIDLTGCPATYTKAAVRFDGTEASNSDGDL
                     AIGNPANGDAPGDYTGDGAAITASGVAIRIYNRADNSQVKLYNDSAYSTIDTTAGTAS
                     MEFIARYIATDATVTAGTANADSQFTVEYQK"
     gene            complement(25224..27053)
                     /gene="glmS"
                     /locus_tag="MOX77_000847"
     CDS             complement(25224..27053)
                     /gene="glmS"
                     /locus_tag="MOX77_000847"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HCA3356471.1"
                     /translation="MCGIVGAIAQRDVAEILLEGLRRLEYRGYDSAGLAVVDAEGHMT
                     RLRRLGKVQMLAQAAEEHPLHGGTGIAHTRWATHGEPSEANAHPHVSEHIVVVHNGII
                     ENHEPLREALKARGYTFVSETDTEVIAHLVNWELKQGGTLRDAILRAIPQLRGAYGTV
                     IMDTRHPDTLLAARSGSPLVIGLGMGENFIASDQLALLPVTRRFIFLEEGDIAEITRR
                     SVNIFDNTGAEVKRQDIESNLQYDAGDKGIYRHYMQKEIYEQPNAIKNTLTGRISHGQ
                     VDLSELGPNADDLLSKVEHIQILACGTSYNSGMVSRYWFESLAGIPCDVEIASEFRYR
                     KSAVRRNSLMITLSQSGETADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLALMT
                     NAGTEIGVASTKAFTTQLTVLLMLVAKLSRLKGLDASIEHDIVHGLQALPSRIEQMLS
                     QDKRIELLAEDFSDKHHALFLGRGDQYPIALEGALKLKEISYIHAEAYAAGELKHGPL
                     ALIDADMPVIVVAPNNELLEKLKSNIEEVRARGGQLYVFSDQDAGFVSSDNMHIIEMP
                     HVEEVIAPIFYTVPLQLLAYHVALIKGTDVDQPRNLAKSVTVE"
     gene            complement(27242..28612)
                     /gene="glmU"
                     /locus_tag="MOX77_000848"
     CDS             complement(27242..28612)
                     /gene="glmU"
                     /locus_tag="MOX77_000848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HCA3356472.1"
                     /translation="MLNSAMSVVILAAGKGTRMYSDIPKVLHTLAGKPMVQHVIDAAT
                     KLGAAQVHLVYGHGGELLKQTLKDDKLNWVLQAEQLGTGHAMQQAAPFFSDDEDILML
                     YGDVPLISVETLQRLRDAKPQGGIGLLTVKLDDPSGYGRITRENGKVTGIVEHKDATD
                     EQRQIQEINTGILIANGADLKRWLSKLTNNNAQGEYYITDIIALAYQEGREIAAVHPA
                     RISETDGVNNRLQLSRLERIYQAEQAEKLLLSGVMLRDPARFDLRGTLYCGMDVEIDA
                     NVIIEGYVTLGHRVKIGAGCIIKNSVIGDDCEISPYSVVEDAHLEAACTIGPFARLRP
                     GAELLAGAHVGNFVEMKKARLGKGSKAGHLTYLGDAEIGDNVNIGAGTITCNYDGANK
                     FKTVIGDDVFVGSDTQLVAPVTVGKGATIAAGTTVTRNVADNELVLSRVPQVHKQGWQ
                     RPVKKK"
     gene            complement(28932..29630)
                     /locus_tag="MOX77_000849"
     CDS             complement(28932..29630)
                     /locus_tag="MOX77_000849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HCA3356473.1"
                     /translation="MSFQPSFAGPQPDSRIDRTTFIRRAYLHLAVAIVGFIVLSAAWS
                     FIGGGEYALDVLLAGGRYSWLVVLGAFMLVGMLATRLADNAGTNQTQLIGLGIYVLAE
                     SLIFAPLLTVAAYINPSSIGAAAITPLLLVGGLTFTAFSIKKDFSFLRSFLTMAGFIA
                     FGAIIASVICGFSLGVWFSALMVLLCAGFILYDTSNIIHHYPTDRPAGAALHLFASIA
                     TMFWYILRIFMSRN"
     gene            complement(29859..30278)
                     /gene="atpC"
                     /locus_tag="MOX77_000850"
     CDS             complement(29859..30278)
                     /gene="atpC"
                     /locus_tag="MOX77_000850"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001251972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HCA3356474.1"
                     /translation="MAMTYHLDVVSAEQQMFSGLVEKIQVTGSEGELGIYPGHAPLLT
                     AIKPGMIRIVKQHGHEEFIYLSGGILEVQPGSVTVLADTAIRGQDLDEARALEAKRKA
                     EEHIKSSHGDVDYAQASAELAKAIAKLRVIELTKKAM"
     gene            complement(30299..31681)
                     /gene="atpD"
                     /locus_tag="MOX77_000851"
     CDS             complement(30299..31681)
                     /gene="atpD"
                     /locus_tag="MOX77_000851"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017800291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HCA3356475.1"
                     /translation="MATGKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGNEKLVLEVQ
                     QQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEI
                     GEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNM
                     MELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRL
                     RVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEM
                     GVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPA
                     VDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILGMDELSEEDKLVVA
                     RARKIQRFLSQPFFVAEVFTGSPGKYVSLKDTIRGFKGIMEGEYDHLPEQAFYMVGSI
                     DEAVEKAKKL"
     gene            complement(31708..32571)
                     /gene="atpG"
                     /locus_tag="MOX77_000852"
     CDS             complement(31708..32571)
                     /gene="atpG"
                     /locus_tag="MOX77_000852"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020882764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HCA3356476.1"
                     /translation="MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRP
                     YAETMRKVIGHLANGNLEYKHPYLEERDVKRVGYLVVSTDCGLCGGLNINLFKKLLAD
                     MKAWSDKGVQCELAMIGSKGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVKVMLQAY
                     DEGRLDKLYIVSNKFINTMSQVPTITQLLPLPASEDDDLKRTAWDYLYEPDPKALLDT
                     LLRRYVESQVYQGVVENLASEQAARMVAMKAATDNGGSLIKELQLVYNKARQASITQE
                     LTEIVSGAAAV"
     gene            complement(32622..34163)
                     /gene="atpA"
                     /locus_tag="MOX77_000853"
     CDS             complement(32622..34163)
                     /gene="atpA"
                     /locus_tag="MOX77_000853"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001176751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HCA3356477.1"
                     /translation="MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGL
                     ADCMQGEMISLPGNRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRG
                     LLGRVVNTLGAPIDGKGPVDNDGFSAVEAIAPGVIDRQSVDQPVQTGYKAVDSMIPIG
                     RGQRELIIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHGAL
                     ANTIVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLL
                     LRRPPGREAFPGDVFYLHSRLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQA
                     GDVSAFVPTNVISITDGQIFLESNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGG
                     IRTALAQYRELAAFSQFASDLDDATRKQLDHGQKVTELLKQKQYAPMSVAQQSLVLFA
                     AERGYLADVELAKIGSFEAALLAYVDRDHAPLMQEINQSGGYNDEIEGKLKGILDSFK
                     ATQSW"
     gene            complement(34176..34709)
                     /gene="atpH"
                     /locus_tag="MOX77_000854"
     CDS             complement(34176..34709)
                     /gene="atpH"
                     /locus_tag="MOX77_000854"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015966593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HCA3356478.1"
                     /translation="MSEFVTVARPYAKAAFDFAVEHQSVERWQDMLAFAAEVTKNEQM
                     AELLSGALAPETLAESFIAVCGEQLDENGQNLIRVMAENNRLNALPDVLEQFIHLRAA
                     SEATSEVEVTSATALSEEQLSKISAAMEKRLSRKVKLNCKIDKSVMAGVIIRAGDMVI
                     DGSVRGRLERLADVLQS"
     gene            complement(34724..35194)
                     /gene="atpF"
                     /locus_tag="MOX77_000855"
     CDS             complement(34724..35194)
                     /gene="atpF"
                     /locus_tag="MOX77_000855"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001052215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HCA3356479.1"
                     /translation="MNLNATILGQAIAFILFVWFCMKYVWPPLMAAIEKRQKEIADGL
                     ASAERAHKDLDLAKASATDQLKKAKAEAQVIIEQANKRRAQILDEAKTEAEQERTKIV
                     AQAQAEIEAERKRAREELRKQVAILAVAGAEKIIERSVDEAANSDIVDKLVAEL"
     gene            complement(35254..35493)
                     /gene="atpE"
                     /locus_tag="MOX77_000856"
     CDS             complement(35254..35493)
                     /gene="atpE"
                     /locus_tag="MOX77_000856"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004246596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HCA3356480.1"
                     /translation="MENLNMDLLYMAAAVMMGLAAIGAAIGIGILGGKFLEGAARQPD
                     LIPLLRTQFFIVMGLVDAIPMIAVGLGLYVMFAVA"
     gene            complement(35540..36355)
                     /gene="atpB"
                     /locus_tag="MOX77_000857"
     CDS             complement(35540..36355)
                     /gene="atpB"
                     /locus_tag="MOX77_000857"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HCA3356481.1"
                     /translation="MASENMTPQEYIGHHLNNLQLDLRTFSLVDPQNPPATFWTLNID
                     SMFFSVVLGLLFLVMFRSVAKKATSGVPGKFQTAIELIVGFVHGSVKDMYHGKSKLIA
                     PLALTIFVWVFLMNLMDLLPIDLLPYIAEHWLGLPATRVVPSADVNITLSMALGVFIL
                     ILFYSIKMKGIGGFAKELTLQPFNHWAFIPVNLILEGVSLLSKPVSLGLRLFGNMYAG
                     ELIFILIAGLLPWWSQWILNVPWAIFHILIITLQAFIFMVLTIVYLSMASEEH"
     gene            complement(36364..36744)
                     /gene="atpI"
                     /locus_tag="MOX77_000858"
     CDS             complement(36364..36744)
                     /gene="atpI"
                     /locus_tag="MOX77_000858"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit I"
                     /protein_id="HCA3356482.1"
                     /translation="MPVSLVSRNVARKLLFIQFLAVIASGLLFCLKDPFWGISAVCGG
                     LAVALPNMLFMIFAWRHQAHTPAKGRVSWTFAFGEAFKVLAMLVLLVVALAVLKAVFL
                     PLIVTWVLVLVVQILAPAVINNKG"
     gene            complement(37358..37981)
                     /gene="rsmG"
                     /locus_tag="MOX77_000859"
     CDS             complement(37358..37981)
                     /gene="rsmG"
                     /locus_tag="MOX77_000859"
                     /EC_number="2.1.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462772.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HCA3356483.1"
                     /translation="MLNKLSRLLADAGISLTDHQKTLLVAYVDMLHKWNKAYNLTSVR
                     DPNEMLVRHILDSIVVAPYLQGQRFIDVGTGPGLPGIPLAIVLPDAHFTLLDSLGKRV
                     RFLRQVQHELKLENITPVQSRVEAYPSEPPFDGVISRAFASLNDMVSWCHHLPGEKGR
                     FYALKGQLPGDEIASLPDNFSVESVEKLRVPQLEGERHLVIIKSNKV"
     gene            complement(38084..39973)
                     /gene="mnmG"
                     /locus_tag="MOX77_000860"
     CDS             complement(38084..39973)
                     /gene="mnmG"
                     /locus_tag="MOX77_000860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000499793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HCA3356484.1"
                     /translation="MFYQDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQ
                     MSCNPTIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFKILNASKGPAVRATRAQADRV
                     LYRQAVRIALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLD
                     GKIHIGLDNYSGGRAGDPPSIPLSRRLRELPLRVSRLKTGTPPRIDARTIDFSVLAQQ
                     HGDNPMPVFSFMGNAFQHPQQVPCYITHTNEKTHDVIRNNLDRSPMYAGVIEGIGPRY
                     CPSIEDKVMRFADRNQHQIFLEPEGLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENA
                     KIVRPGYAIEYDFFDPRDLKPTLESKFIHGLFFAGQINGTTGYEEAAAQGLLAGLNAA
                     RLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPYRMFTSRAEYRLMLREDNADLRLTE
                     MGRELGLVDDERWARFNEKLENIERERQRLKSTWVTPSAESADEVNAHLTTPLSREAS
                     GEDLLRRPEMTYAQLTSLAAFAPALEDEQAAEQVEIQVKYEGYIARQQDEIEKQLRNE
                     NTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISGVTPAAISILLVWLKKQGM
                     LRRSA"
     gene            complement(40352..40795)
                     /gene="mioC"
                     /locus_tag="MOX77_000861"
     CDS             complement(40352..40795)
                     /gene="mioC"
                     /locus_tag="MOX77_000861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding protein MioC"
                     /protein_id="HCA3356485.1"
                     /translation="MADITLISGSTLGGAEYVAEHLAEKLEAAGFSTETVHGPLLEDL
                     STSGIWLIISSTHGAGDIPDNLTPFYEDLQTQKPDLSAVRFGAIGIGSREYDTFCGAI
                     EKIEAELKGAGAKQVGETLKINILEHEIPEDPAEIWLGSWINLLK"
     gene            complement(40885..41343)
                     /gene="asnC"
                     /locus_tag="MOX77_000862"
     CDS             complement(40885..41343)
                     /gene="asnC"
                     /locus_tag="MOX77_000862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator AsnC"
                     /protein_id="HCA3356486.1"
                     /translation="MENYQIDNLDRGILDALMENARTAYAELAKQFGVSPGTIHVRVE
                     KMKQAGIITGARIDVSPKQLGYDVGCFIGIILKSAKDYPSALARLESLDEVTEAYYTT
                     GHYSIFIKVMCKSIDALQHVLINKIQTIDEIQSTETLIVLQNPIMRTIKP"
     gene            41494..42486
                     /gene="asnA"
                     /locus_tag="MOX77_000863"
     CDS             41494..42486
                     /gene="asnA"
                     /locus_tag="MOX77_000863"
                     /EC_number="6.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--ammonia ligase"
                     /protein_id="HCA3356487.1"
                     /translation="MKTAYIAKQRQISFVKSHFSRQLEERLGLIEVQAPILSRVGDGT
                     QDNLSGCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLGQHDFSAGEGLYTHMKALRPD
                     EDRLSPLHSVYVDQWDWERVMGDGERQFSTLKSTVEAIWAGIKATEAEVHKQFGLAPF
                     LPDQIHFVHSQELLARFPDLDAKGRERAIAKELGAVFLVGIGGKLSDGRRHDVRAPDY
                     DDWSSASELGYAGLNGDILVWNPVLEDAFELSSMGIRVDADTLMRQLALTGDEDRLQL
                     EWHQALLRGEMPQTIGGGIGQSRLTMLLLQLPHIGQVQCGVWPAQVRESIPAIL"
     gene            complement(42491..43942)
                     /gene="viaA"
                     /locus_tag="MOX77_000864"
     CDS             complement(42491..43942)
                     /gene="viaA"
                     /locus_tag="MOX77_000864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase RavA stimulator ViaA"
                     /protein_id="HCA3356488.1"
                     /translation="MLTLDTLNTMLAVSEEGMVEEMILALLASPQLVIFFEKFPRLKN
                     AVTADLPRWREALRSRLKDARVPPELTEEVMCYQQSQLLSTPQFIVQLPQILALLHRL
                     HSPYAAQAKQLTESNSTFTPALHTLFLQRWRLSLVVQATTLNQQLLEEEREQLLSDVQ
                     ERMTLSGQLEPTLAENDNAAGRLWDMSAGQLKRGDYQLIVKYGEFLAAQPELMQLAEQ
                     LGRSREAKSVPKKDAPMETFRTLVREPATVPEQVDGIQQGDDILRLLPPELATLGITE
                     LEYEFYRRLVEKQLLTYRLHGEAWREKVTERPVVHQDVDEQPRGPFIVCVDTSGSMGG
                     FNEQCAKAFCLALMRVALADNRRCFIMLFSTDVVRYELSGPESIEQAIRFLSQRFRGG
                     TDIASCFRAIIERMQGREWFDADAVVISDFIAQRLPDDVVSKVGELQRLHQHRFHAVA
                     MSAHGKPGIMRIFDHIWRFDTGMRSRLLRRWRR"
     gene            complement(43936..45432)
                     /gene="ravA"
                     /locus_tag="MOX77_000865"
     CDS             complement(43936..45432)
                     /gene="ravA"
                     /locus_tag="MOX77_000865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase RavA"
                     /protein_id="HCA3356489.1"
                     /translation="MAHPHLLAERISRLSSALEKGLYERSHAIRLCLLAALSGESVFL
                     LGPPGIAKSLIARRLKFAFQRARAFEYLMTRFSTPEEVFGPLSIQALKDEGRYERLTT
                     GYLPEAEIVFLDEIWKAGPAILNTLLTAINERHFRNGAFEEKIPMRLLVAASNELPEA
                     DSSLEALYDRMLIRLWLDKVQDKANFRSMLVSQQDESDNPVPASLQVSDEEYQQWQKD
                     IGAISLPDPVFELIFTLRQQLDNLPNAPYVSDRRWKKAIRLLQASAFFSGRDAVAPID
                     LILLKDCLWYDAQSLNLMQQQLEILMTGHAWQQQAMLTRLGGIVQRRLQLQQQQSDKT
                     AFTVIKEGGMFSRRPHYTLPPEASASTLTLLLQKPLKLHDMEVIHITFDRSALELWLT
                     KGGEIRGKLNGIGFAQTLNMEVDNAQHPVVRDISLQGTRLALPGAAEDSMPAEIKQQL
                     ETLENDWRQQHTRFSEQQHCLFIHSDWLGRIEASLQDVGEQIRQAQQC"
     gene            45780..47648
                     /gene="kup"
                     /locus_tag="MOX77_000866"
     CDS             45780..47648
                     /gene="kup"
                     /locus_tag="MOX77_000866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000102304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low affinity potassium transporter Kup"
                     /protein_id="HCA3356490.1"
                     /translation="MSTDNKQSLPAITLAAIGVVYGDIGTSPLYTLRECLSGQFGFGV
                     ERDAVFGFLSLIFWLLIFVVSIKYLTFVMRADNAGEGGILTLMSLAGRNTSARTTSML
                     VIMGLIGGSFFYGEVVITPAISVMSAIEGLEIVAPQLDTWIVPLSIIVLTLLFMIQKH
                     GTGMVGKLFAPIMLTWFLILAVLGLRSIIANPEVLHALNPVWAVRFFLEYKTVSFIAL
                     GAVVLSITGVEALYADMGHFGKFPIRLAWFTVVLPSLVLNYFGQGALLLKHPEAIKNP
                     FFLLAPDWALIPLLILAALATVIASQAVISGVFSLTRQAVRLGYLSPMRIIHTSEMES
                     GQIYIPFVNWLLYFAVVVVIVSFEHSSNLAAAYGIAVTGTMVLTSILSTTVARKNWHW
                     NKYFVALILIAFLCVDIPLFSANLDKLLSGGWLPLSLGLIMFTIMTTWKSERFRLLRR
                     MHEHGNSLEAMIASLEKSPPVRVPGTAVYMSRALSVIPFALLHNLKHNKVLHERVILL
                     TLRTEDAPYVHNVRRVQIEQLSPTFWRVVASYGWRETLNVEEVFHRCGLEGLSCRMME
                     TSFFMSHESLIVGKRPWYLRLRGKLYLLLQRNALRAPDQFEIPPNRVIELGTQVEI"
     gene            47865..48284
                     /gene="rbsD"
                     /locus_tag="MOX77_000867"
     CDS             47865..48284
                     /gene="rbsD"
                     /locus_tag="MOX77_000867"
                     /EC_number="5.4.99.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-ribose pyranase"
                     /protein_id="HCA3356491.1"
                     /translation="MKKGTVLNSEISSVISRLGHTDTLVVCDAGLPIPNSTARIDMAL
                     TQGVPSFMQVVDVVTWEMQVEAAILATEIKQQNPQLHETLLTHLEQLQQHQGNTIKIS
                     YTTHEQFKKLTADSQAVIRSGECSPYANVIICAGVTF"
     gene            48292..49797
                     /gene="rbsA"
                     /locus_tag="MOX77_000868"
     CDS             48292..49797
                     /gene="rbsA"
                     /locus_tag="MOX77_000868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose ABC transporter ATP-binding protein RbsA"
                     /protein_id="HCA3356492.1"
                     /translation="MDALLQLKGIDKAFPGVKALSGAALNVYPGRVMALVGENGAGKS
                     TMMKVLTGIYTRDAGSLLWLGKETTFNGPKSSQEAGIGIIHQELNLIPQLTIAENIFL
                     GREFVNRFGKIDWKKMYAEADHLLAKLNLRFKSDKLVGELSIGDQQMVEIAKVLSFES
                     KVIIMDEPTDALTDTETDSLFRVIRELKSQGRGIVYISHRMKEIFEICDDVTVFRDGQ
                     FIAEREVATLTEDSLIEMMVGRKLEDQYPHLDNAPGEIRLKVDNLCGPGVNDVSFVLR
                     KGEILGISGLMGTGRTELMKVLYGAMPRTSGYVTLEGHEVVTRSPQDGLANGIVYISE
                     DRKRDGLVLGMSVKENMSLTALDYFSRAGGSLKHKDEQQAVGDFIRLFNVKTPSMEQA
                     IGLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKADGLSIIL
                     VSSEMPEVLGMSDRIIVMHEGHLSGEFTREQATQEVLMAAAVGKLNRVNQE"
     gene            49803..>50079
                     /gene="rbsC"
                     /locus_tag="MOX77_000869"
     CDS             49803..>50079
                     /gene="rbsC"
                     /locus_tag="MOX77_000869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002882531.1"
                     /note="functions to transport ribose at high affinity;
                     forms a complex with RbsA2C2B; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose ABC transporter permease"
                     /protein_id="HCA3356493.1"
                     /translation="MTTQAVSGRRYFTKAWLLEQKSLIALLVLIAIVSTLSPNFFTVN
                     NLFNILQQTSVNAIMAVGMTLVILTSGIDLSVGSLLALTGAVAASIVG"
BASE COUNT        11904 a        13517 c        12856 g        11802 t
ORIGIN      
        1 aacgttatgc acaggcgttt ttagcgtttg cgtaacgggc tttgttccca cttcaaaacg
       61 cagttgtggg gcatccgcgc cgcagaatgt gttgagtaat ccattgatat tgttgaggta
      121 cttatctctt acccaatcga gcacaaaacg gtttggcgca tacaaagcca gcgtgttatc
      181 gctcagttcc gcctgcaacg ggcgtatcca catactgaat tctgtggctg gtaactcatc
      241 ctgcaatcgg gcaagacact gctgccaaag cgaaagtgac acggcggact ccactcgaac
      301 aaaagtcgat aaatgacaaa ggctgataca ttaatgattg ttggcgcacg tcgataagac
      361 cctgcatgaa gggtgacgca ctaaccgctg tctgcggttt tcacggatct ttcaaacgat
      421 cgcgacttca cgcagtctga aagatttcgt gttcatgcct gaccaggatc gtttgaaacg
      481 atcaggaccg cggatcatag cctaaactga gcaagagatc ttctgtttct cacagattct
      541 tcccgattta tccacagggc tttccaggaa aggataagtg taatcgatcc aggggaactc
      601 ctgtacgctt tcgcgcgcat attgaaaaaa ttaatatgta aaggtgagca gacgcctaaa
      661 agatcgcata aagatccagg gcgatccttg cgctttacct ggcagtccgt ataattctcc
      721 acccgtcgcg caatgcccgt catatggcgt caacgctgct tattttccgc acaaaaaggc
      781 gtggaaaatc gcgggaaagt aaggaaagag aattgactcc ggagtgtaca attattacaa
      841 tccggcctct ttaatcaccc acactgtggc gtaagtcgtt caaagtttgt tcgggtatac
      901 gcaaaagtca gtgaatttat tcaagtttag gtagaaatcg ccatgaaacg cacttttcaa
      961 ccgtctgtac tgaagcgcaa ccgttctcac ggcttccgtg ctcgtatggc tactaaaaat
     1021 ggtcgtcagg ttctggcacg tcgtcgtgct aaaggccgcg ctcgtctgac cgtttccaag
     1081 taataaagct aacccctgag tggttaagct cgcatttccc agggagttac gtttgttaac
     1141 tcccgctcat ttcacattcg tcttccagca acctcaacgg gctggcacgc cgcaaatcac
     1201 catcctcggc cgcctgaatt cgctggggca tccccgtatc ggtcttaccg tcgccaagaa
     1261 aaatgttcga cgtgcgcatg aacgcaaccg gattaaacgt ctgacgcgtg aaagcttccg
     1321 tctgcgccag catgaacttc ctgcaatgga tttcgtggtg gtggcgaaaa aaggggttgc
     1381 cgacctcgat aaccgtgctc tctcggaagc gttggaaaaa ttatggcgcc gccactgtcg
     1441 cctggctcgc gggtcctgat agcccttatt cgggtctatc aacgcctgat cagtccgctg
     1501 cttgggccgc attgtcgttt cacgccaacg tgctcaagct acggaattga ggcattgcgc
     1561 aggtttggag tgataaaagg cagttggttg acggtgaaac gcgtattaaa atgccaccct
     1621 ttacaccctg gtggtgacga tcccgtcccg cccggaccat ttgataccag agaacactaa
     1681 cgatggattc gcaacgcaat cttttagtca tcgctttgct gttcgtgtct ttcatgatct
     1741 ggcaagcctg ggagcaggat aaaaatccgc aacctcagac tcaacagacc atgcagacaa
     1801 cgaccaccgc agcgggtagc gccgccgacc agggcgtacc agccagtggc caggggaaaa
     1861 tgattacggt gaaaaccgat gtgcttgatt tgactatcaa cacccgtggt ggtgatgtcg
     1921 agcaggcctt gctcccggct tacccgaaag aactgggttc caacgaaccg ttccagctgc
     1981 tggaaaccac cccgcagttt atctatcagg cgcaaagcgg cctgacaggc cgcgacggcc
     2041 cggataaccc ggcgaacggc ccgcgtccgc tgtacaacgt cgagaaagat gcgtttgtac
     2101 tggccgacgg tcagaacgaa ctgcaggttc cgatgactta tactgacgcc gcaggcaaca
     2161 cgtttaccaa aacgtttgtc tttaagcgtg gcgattatgc ggttaacgtg aactatagcg
     2221 tgcagaacac cggcgaaaaa ccgctggaag tctccacctt tggtcagtta aaacaatccg
     2281 tcaacctgcc tcctcatcgc gacaccggca gtagcaactt tgcgttgcat acgttccgcg
     2341 gcgcagcgta ctccacgccg gatgagaagt atgagaaata caaattcgac accattgccg
     2401 ataacgaaaa cctcaacgtc agctccaaag gcggttgggt ggcaatgttg cagcagtatt
     2461 tcgctaccgc atggattccg cgtaacgacg gcaccaacaa tttctacacc gccaatctgg
     2521 gtaacggcat tgtcgctatc ggctataaag cgcagccggt actggtacag ccaggccaga
     2581 ctggcgcgat gaccagcacc ctgtgggtcg gcccggaaat tcaggataaa atggcggctg
     2641 ttgcaccgca cctggatttg accgtggact acggctggtt gtggttcatc tctcagccgc
     2701 tgttcaagtt gctgaagtgg atccacagct ttgtgggcaa ctggggcttc tccattatca
     2761 tcattacctt tatcgttcgc ggtatcatgt acccgctgac caaagcgcag tacacgtcaa
     2821 tggcgaagat gcgtatgctg cagccgaaaa ttcaggcgat gcgcgaacgt cttggcgatg
     2881 ataaacagcg ccaaagccag gagatgatgg ccctgtacaa agcggagaag gttaacccgc
     2941 tgggcggctg cttcccgctg atcatccaga tgcctatctt cctggcgttg tactacatgc
     3001 tgatgggttc cattgaactg cgtcatgcgc cgttcgcgct gtggattcat gacctgtctg
     3061 cacaggaccc gtactacatt ctgccgatcc tgatgggcgt aacgatgttc ttcattcaga
     3121 agatgtcgcc gaccaccgtg accgacccga tgcagcagaa gatcatgacc tttatgccgg
     3181 tcatctttac agtgttcttc ctgtggttcc cgtcaggtct ggtgctgtac tatatcgtca
     3241 gcaacctggt caccatcatt cagcagcagc tgatttaccg tggtctggag aagcgtggcc
     3301 tgcatagccg cgagaagaaa aaatcctgat tcggtgtagg ccggataagg cgaagccgcc
     3361 atccggcaag gcgcgccggt cagcctgatg gcgctaacgc ttatcaggcc tacaatcaaa
     3421 aggcggtcat atgaccgcct ttttttattg caacaaagtt gagactaacc atgagccata
     3481 acgacactat cgtcgcccag gcaaccccac cgggacgcgg tggcgtgggt atcctgcgta
     3541 tttccggtct gaaggcgcgc gacgttgcgc aagaggtgct gggcaagctg ccgaagccgc
     3601 gctatgccga ctacctgccg tttaaagatg ttgacggcag cgcgctggat cagggtattg
     3661 cgctgtggtt ccccggcccg aactccttca ccggtgaaga tgtgctggag ctacaagggc
     3721 acggcggtcc ggtgattctg gacctgctgt taaaacgtat cctgacgctt ccaggcgtgc
     3781 gaattgcccg accgggcgag ttctccgagc gagcgttcct caacgataag ctcgatttag
     3841 cccaggcgga agccattgcc gacctgatcg atgccagttc cgaacaggcg gcgcgttcgg
     3901 cgctaaactc gttacagggg gcattttccg cccgcgttaa ccaccttgtg gaagcactta
     3961 ctcacctgcg aatctacgtc gaagcggcta ttgattttcc ggatgaggag atcgactttc
     4021 tctctgacgg caaaatcgaa gcgcagctca atggcgtcat cgccgatctt gacgccgtgc
     4081 gcaccgaagc gcgccagggc agcctgctgc gcgaagggat gaaggtagtg attgccggac
     4141 gcccgaatgc cgggaaatcc agcctgctga atgcgctggc aggccgtgaa gcggccattg
     4201 tcaccgatat cgccggtacc acgcgcgacg tgttgcgcga gcacatccac atcgacggga
     4261 tgccgctgca tatcatcgat accgccggac tgcgcgacgc caacgacgaa gttgagcgta
     4321 tcggcatcga acgcgcctgg caggagattg aacaggccga tcgagtgctg tttatggtgg
     4381 atggcaccac gacggacgcc gttgaccctg ccgacatctg gccggacttt atcgcccgtc
     4441 tgcccaaaaa tctaccgatt accgtggtac gtaacaaggc ggatatcacc ggcgaaacgc
     4501 tgggtattag tgaagtaaac ggtcactcac tggttcgcct ctcggcgcgt accggcgaag
     4561 gcgtcgacgt gttgcgtaac cacctcaagc agagcatggg gtttgatacc aatatggaag
     4621 gcggcttcct ggcccgccgc cgtcacctgc aggcgctggc ggaagccgct aaccatcttg
     4681 aacagggcaa agcgcagcta ttaggcgcat gggcggggga actgctggcg gaagagttgc
     4741 gcctggcgca gcaaagctta agcgagatta ccggcgagtt tacctccgac gacctgctgg
     4801 gacggatttt ctccagcttc tgtatcggta aataacgttg tgttgcccgg tggcgcgatg
     4861 cttaccgggc ctacaaaacc cgtaagccgg ataaggcgtt tacgccgcca tccggcagca
     4921 atgatttccc atgcggaaat cactgttgtc caaatgacaa ctcgtctcgc gcaacgtcgc
     4981 cccgtattct tagcgccaca cttttcgtga ggccgctatg aaacgttttc tactgtgtag
     5041 ttttgccctg gttttactct atcctgctgg tattgatatg tatctggtcg gtttaccgcg
     5101 tatagccgcc gatctgaacg ccagcgaggc gcagttgcat atcgccttct ccgtttacct
     5161 ggccggaatg gcgacggcca tgctgtttgc cgggaagata gccgaccagt caggccgcaa
     5221 gccggtcgcg atcgtcggcg cgatcgtctt tatgatggcc tcactgcttt gttcacgggc
     5281 gtcggaaggc tcgctatttc tgagtgggcg ttttcttcag ggggtaggag caggcggctg
     5341 ctatgtggtg gcgttcgcca ttctgcgcga cacgctcgac gagcatcgcc gggcgaaagt
     5401 gctgtcatta ttgaatggga ttacctgtat tgtgccggta ctcgccccgg tgatggggca
     5461 tttgattatg cttcgtttcc cctggcaaag tctgttctat acgatgtcca cgatgggcat
     5521 tatggtgggc ctgttatcac tgtttatcct gcgcgagacg cgcccggcaa ggctggctcc
     5581 acgcgattta tcaccatcgt cgtccgccgc cgagtcgctg gttaaccgtt ttttcgttag
     5641 tcgactagcg atcaccaccc ttagcgtgtc ggtgatcctg accttcgtca atgcctctcc
     5701 agtgctgctg atggaggtga tgggatttag ccgtggcgac tatgccatta ccatggcgct
     5761 caccgcaggc gtcagcatgg tcgtctcttt ttctacccct tttgcgcttg ggttatttaa
     5821 gccgcgaacc ttaatgctcg tctcacaggg gctgtttttg acggctggcg tgacgttaag
     5881 ccttgctcat accaataccg tcacgctctt tggcctgacg cttatctgcg ccggattctc
     5941 ggttggtttt ggcgtcgcga tgagccaggc gctggggccg ttttcgctgc gcgccggagt
     6001 ggccagttcc acgctgggta tcgctcaggt ttgcggttca tcactgtgga tttggctggc
     6061 ggcaatactc ggtatcagcg cgatgaatat gctgatcggg attctgattg gttgtagcat
     6121 agtgagtatt ctgctgatct tctccgtcgc gcccaacagg tccgtagccg agcatgaaga
     6181 aatcccttac cagtctcgat cttaatctgc tgttatgcct acagttactc atgcaggagc
     6241 gcagcgtcac taaagctgca aaacggatga acgtaacgcc ctctgcggtc agcaaatcgc
     6301 tggcgaaact ccgggcatgg tttgacgatc cgctgttcgt caatacgccg ctgggcctgg
     6361 cgccgacgcc gctgatggtc agtatggagc aaagtctggc ggactggatg cagatgggga
     6421 atcaactgct tgataagcca catcatcaaa cgccgcgcgg tttaaaattt gagttggcgg
     6481 cagagtcgcc gctgatgatg attatgttta attcactgtc gcagcagatt tatcagcgct
     6541 atccgcaggc taccattaag gttcgcaact gggattatga ctcgctggag gcgattacgc
     6601 gcgggaaagt cgatatcgga tttaccggac gcgaaagcca tccccgctcg cgagagttga
     6661 tcagtctgtt gccgctcgcg attgactttg aggtactgtt tagcgattta ccgtgggtct
     6721 ggctgcagga agatcatccg gcactgcgcg aagcgtggga tctggacact tttctgcgct
     6781 acccgcatat cagtatttgc tgggagcaaa gcgatacctg ggcgctggat gatgtcctac
     6841 aagaaatggg acgcaaacgc catatcgcgt taagcctgcc ggggttcgag cagtcgctct
     6901 ttatggccgc ccagccgggt cacaccctga tagcaaccgc gccgcgctat tgccagcact
     6961 acaatcagct ccaccagcta ccgttagtgg cgcgccccct gccttttgat gcgcaacagc
     7021 gggaaaagct gatggtgccg tttaccctat tatggcacaa acgtaatagt cataatccca
     7081 agattgtgtg gctacgacag gctatcaaca cgctctgccg tcgccttatc tgaccacctg
     7141 cgttgataaa ttaaccttac tcttaccaga aatgtcaccg tctgattaaa gaaccttctg
     7201 aaattgaatt tttagcgcgt aaaacctgtc cataatttac gttaatgtta ctctcgtcat
     7261 tatcacggcc cattaatcac ggagcgaaaa atggcgactc actttgccag agggatactt
     7321 acggagggac agttggtttc aattcgtctc tcttcgtctt gccatattga agccagaaac
     7381 ctgcctgctc accgacgaac gcattttctc gcctccagag gccttcttgc cgaactgatg
     7441 tttatgctgt acggaattag cgagctgccg gaaatcatta ttcaggcgaa aggtaaaccc
     7501 gcgtttcgtg acaaaaatct gccaggtttt tctatctcct acgccggaaa tatggttggc
     7561 gtggcgttga ccaccgaagg agagtgcggg ctggatatgg aattacagcg cacctcccgc
     7621 ggctttcacc atccgcattc gctcgaacgc caccctttct cccgtaatga aaacttatgg
     7681 gtagccaatc aaaacgatcc caacgaagcg cgagcgcaac tcattacatt gcgccagagc
     7741 gtgttaaaac tcaccggcga tgtcatgaat gacgatccgc gggagctgca acttttaccc
     7801 gttgccggac gcctgaagtg cgcgcatgtc acgcagcttg aagccgtgtg cgatgcggaa
     7861 gatgtgctgg tatggtccgt aaccgttacg ccagcgatag aaaaattaaa agtgtgggag
     7921 ttcgatggca aactgggctg gaaaagcctg cccgatatcc agacgcgcgc caatgagcca
     7981 accggccgtc tgatgcgatt cgcccaactc cccgccgcca aatcgtatac gcttaatcgt
     8041 tcataatgaa aaaaggggca cgtatgtctg aaatgctgaa tgtggttaca ttgctgggaa
     8101 gtttacgcaa aggttccttt aacgggatgg tggcgcgtac gctgcctaaa gtcgcgccgg
     8161 caggaatgac ggtatcgccg ctgccttcaa tcggggatat tccgctgtat gacgccgata
     8221 tccagcagga agagggattt ccagccagcg tagaggcgct ggcggagcag attcgcaacg
     8281 ccgacggcgt cgtcattgtg acgccggaat ataactattc cgttcccggc ggcctgaaaa
     8341 atgccatcga ctggctatcc cgtctgcctg agcagccgct ggcgggtaag cccgttctta
     8401 tccagaccag ctcaatggga gcgattggcg gcgcgcgctg ccagtatcat ctgcgccaga
     8461 ttctggtgtt ccttgatgcg atggtgatga ataaaccgga atttatgggc ggcgtgattc
     8521 agaataaagt cgacccgcag actggagaag tggtggatca gggaacgtta gatcatttga
     8581 ccggtcagtt gaccgcattt ggcgagtata ttcagcgcgt taaagcgtaa gttagttaaa
     8641 caccctcccc ccgatggggc gagggttcat ttcatcagtg tgcgtcaata aacacaatct
     8701 tcagcacgaa taacagcgcg acaatcacta cgcacgggct aaggtcgcgc aggcgaccgg
     8761 taccgatttt catcacgcag taagagataa agcccagcgc gataccttcg gtgatcgaga
     8821 agctaaacgg catcattacc gccgtaataa acgccgggac cgattcggtt aaatcctgcc
     8881 agtttacccg cgccaggctg gaggtcatca gcacgccgac gtaaatcaac gcgcccgccg
     8941 ccgcgtaagg cggcaccatg cccgccagcg gcgacaggaa gataaccagc aggaacaaaa
     9001 taccgactac caccgccgtc aaaccggtgc gaccgcccac cgaaacgccg gaagacgatt
     9061 caatataagc ggtcacagaa gaggttccga caaatgcgcc agtgacggaa gagatactat
     9121 caacaaacag cgcctgcttc atgcgcggga atttgccttt ctcatccgcc aggccggctt
     9181 tatcggtcac gccaatcagc gtaccggagg agtcaaacag gtttaccagc atgaaggaga
     9241 aaataacccc cgccaggcca agattgaacg agcctgccaa atcgacatgc cctaccacgc
     9301 tggtgacgct tggcggcgcg gagacaatgc cgttgtagtg cacatcgccc attatccagc
     9361 caagcagcgt cgtgacgatg atggacacca gcaccgccgc atgaatgttg cgcgaagcga
     9421 gaatcgcaat aataaagaat ccgagaaccc ccagcagcac gctgtgcgaa gtcaggttgc
     9481 cgatgctgac cagcgtttcc gggttagcga cgatcacgcc ggcgtttttc agccccatca
     9541 tgccgataaa caggccgatg ccgctggtga tgcccacgcg caggctgacc ggaatgttgg
     9601 caatcatcca gtaacgcacg cggaagatag tcagcaataa aagaccaaca gcgccccaga
     9661 aaatggcgcc catgcctacc tgccacggca gtcccattgc ctgcacaacc acgaaggcaa
     9721 agaacgcatt cagccccatc gcgggcgcca gcgccaccgg caggttagcg aacaggccca
     9781 tcagaatact gccaaaggcc gcaatcagac aggtggtcac aaagacggcg ctggtgtcca
     9841 tgccagctac gcccagaatt tgcgggttaa caaaaacgat ataaaccatc gtcaggaaag
     9901 tggtaaaacc ggcgatcact tcggttcgtg ccgtcgtgcc atgttcgcgc agtttaaaca
     9961 cgcgttccag cataccctga ccagaagcct gggtggtgtg ttgttgactc attatcaatt
    10021 tccggagaaa ggagggaaaa ttcgccgtta tcctatacca aaatgcgaca cctggcgcag
    10081 ttgtgtggta atttttttca ctcaatttgt tagtacggca acgattgcgt cccctcattc
    10141 agcattacgt aaacgttaaa cttgttaaaa tggaaatgac atgtcccaaa tcgaagcggt
    10201 gttttttgac tgtgacggca cgctggtcga cagtgaagta atttgctcgc gcgcctatgt
    10261 cactatgttc cggcagttcg gcattacgct tgagctcacg gaagtattca gacgctttaa
    10321 aggcgtaaag ctctacgaaa ttatcgatac catcagtaaa gagcatggcg ttgcgctggc
    10381 aaaggcggag ctggagccgg tgtatcgcgc ggaagtggcg cgcctgttcg ataccgaact
    10441 ggaagcgatc gcgggcacaa ataccctgct ggagagcatt aagacgccca tgtgcgtggt
    10501 atccaacggg ccggtcagta agatgcagca ttcgctgggt aaactgggca tgttgcatca
    10561 ttttcccgat ttgctgttta gcggttacga tattcaacgc tggaagcccg atccggcgct
    10621 gatgctccat gcggcgaacg ccatgaaggt caatgttgag aagtgtattc tggtggatga
    10681 ttccagcgca ggcgcgcagt caggaattgc ggcgggaatg gaagtatttt atttctgcgc
    10741 cgatccgcat aacaagccga tcgatcaccc taacgtgacg acatttaccg atttggcgca
    10801 gttgccggga ttgtggaaag cgcgcgggtg gaagattacg cgttaactga aatgccggat
    10861 ggcgctaacg ctcatccggc ctacagcatc tgtacctgta ggcccggtaa gcgcagcgcc
    10921 accgggcaaa agaatgagat ttactctttc ggatctttcc ccgccagcag cttatccagc
    10981 tcatcgccgc cgacgtgacg gaaatcctgc cccttcacga agtagaagat gtattcgcag
    11041 atattctggc aacggtcacc gatacgctcg atagaacgag cgcagaataa cgcggtcagc
    11101 acgctgggaa tggtgcgcga gtcttccatc atgtaggtca tcagctgacg cacgatacct
    11161 tcgtactcct ggtcaacttt cttgtcttca cggtagatac gcaccgcttc gtcgagatcc
    11221 atgcgcgcga acgcatccag cacgtcgtgt agcatctgca cggtgtggcg gcccagcgac
    11281 tccagactca ccaacagcgg ctggtgctgc tgggagaatt tctccagcgc ggtacggcag
    11341 attttatccg ccacgtcgcc aatgcgctcc agttcggcga tggttttgat aatcgccatc
    11401 accagacgca ggtcactcgc cgtcggctgg cgcttggcga taatacgcac gcaggcttca
    11461 tcgatggcga cttccatcat attaacctga tggtcgcctt ctaccacgcg cttcgccagc
    11521 tcgctgtcct ggttgtgcat ggcggtaata gcgtcagaaa gctgctgctc caccatgccg
    11581 cccatggtca ttacctgagt gcggatgctt tccagttcgg cgttgaactg gccggaaata
    11641 tgtttattaa ggttcagact gtccattacg cactcctgaa ttaaccgtaa cgaccggtga
    11701 tataatcttc tgtttgtttc ttcgcgggct tggtgaacag atcgtccgtg ttgctgaact
    11761 caatcaactc gcccaggtac ataaacgccg tatgatcgga acaacgtgcc gcctgctgca
    11821 tgttatgggt cacgatcacc acggtgtaat cctgtttcag ctcggtgatc agctcttcga
    11881 tacgcccggt ggagatcggg tccagagctg aacatggctc atccagcagc aacacttccg
    11941 ggcgaatggc gataccgcgc gcaatgcaca gacgctgctg ctgaccaccg gagagagagt
    12001 acccgctctg gtgcaattta tctttggttt cgttccataa tgcggctttg gtcaacgccc
    12061 actgcacgcg ctcgtccata tcggcacgag acagcttctc aaacagacgc acgccaaagg
    12121 cgatattgtc atagatggac atcgggaacg gcgtcggctt ctggaatacc atccccactt
    12181 ttgcgcgcag cagcgcgata tcctgggtgt tggtgagaat attgtcgcca tccagcagaa
    12241 tttcaccttc cgcgcgctgc tccggataaa gcgagtacat tttattgaag gtacgcagta
    12301 gcgttgattt accgcagccg gatggcccga taaatgccgt tacctgattc ttcgcgatat
    12361 ccagattaat gttcttcagg gcatggaatt tgccgtagta gaagttcaaa tcacgaacct
    12421 gaatcttact cggggcagtt tcaaccatac tcatttcact cttttcctca tccagcgccg
    12481 catccgccac gccgtaaaat aatgcctgat ggcgctacgc ttatcaggcc tacaatgtct
    12541 ttaaccgtgt tttttcttcg cgaaaacaac acgcgccaga atattcagca gcagtacgca
    12601 cagggtaata atcagcacgc ccgcccaggc taattgttgc cattcggcaa acgggctcat
    12661 cgcgaattta aaaatggtca ccggcaggtt ggcgatcggc tgcatcatgt cggtgctcca
    12721 gaactggttc gagagcgcgg taaacaacaa tggcgccgtt tccccggcga tacgcgcaat
    12781 agccagcaga ataccggtca taatcccgga gatagaggct ttcagcgtaa tcgcggagat
    12841 catcttccac ttcggcgtac ccagcgcata agcggcttca cgcaggctat ccggtaccag
    12901 cttgagcatg ttttcagtgg tacggataac gatcggcacc tgcaacagcg ccagcgcaat
    12961 cacccctgcc cagccggaga agtgctgcat ctgcgccacc acgatggtgt aaacaaacag
    13021 ccccacaaca attgacggcg cggaaagcag aatgtcgtta ataaagcgaa tgatttccgc
    13081 cagccaggat ttacggccat actcggccag gtaaataccc gccataatcc ccagcggcgt
    13141 acccaatacg gtagcccaga gaatcaataa tccactcccc gccagggcgt tcgccagccc
    13201 gccgcccgcc gtgttcggcg gcggcgtcat ttcggtaaac agcgccagcg acataccatc
    13261 aatgccgcgc gtgatggtgg acatcaaaat ccagatcagc cagaacaggc caaatgccat
    13321 cgtcgccatt gagagcgtta gtgcgatacg gttcttcatg cggcgacgcg cctgcatctt
    13381 gcgacggaat tccgcgagct gcgcggtgtt ctgcatatca agcgtagcca ttaacgtgct
    13441 ccctcgttct tcgccagacg cataatcatg aacttagacg ccgccaggac gataaaggtg
    13501 atcacaaaca ggatcagccc cagctccatc aacgctgcca cgtgcagacc cgattccgcc
    13561 tcagcgaatt cgttggccag cgcggaagtg atgctgttgc ccggcatata cagcgacgcg
    13621 ctgtcgagct ggtaggtgtt gccgatgata aaagtgaccg ccatcgtttc acccagagca
    13681 cggcccagcc ccagcataat gccgccgatc acgccatttt tggtgaacgg tagcacgatg
    13741 cgccagataa cttcccaggt agtacagccg ataccgtaag cggactcttt catcattacc
    13801 ggcgtttgct cgaagacgtc gcgcataacc gccgcaatgt aggggatgat catgatggcg
    13861 aggatgacgc ccgccgccag aataccgata ccaaaggccg ggccggagaa cagcgcgccg
    13921 acaaacggaa tgttggaaag aatattgccg accggctcct ggaagtacgt cgcaaacagc
    13981 ggcgcgaaga taaacagccc ccacatgccg tacacgatac tgggaattgc cgccagcagt
    14041 tcaatggcga tgccgagcgg acgcttcagc cagcctggcg ccagctcggt taaaaacagg
    14101 gcaatgccga aactaaccgg aacggcgatc agcagtgcga taaaggaggt taccagcgtg
    14161 ccgtaaatgg gcaccagtgc gccgtagata tcgtttggcg cgtcccactc cttagtccaa
    14221 agaaatgaga aaccaaattt ctgaatactt ggccaggagg agatgatcaa tgagacgata
    14281 ataccgccca acatcaatag cacaatcagc gcagccagtt ttaccagcgc gctgaaaatc
    14341 atgtcgcctt ttttacccgg cgggttaaaa gcaggcttgg ttgcagccat aaattactct
    14401 ttccattaaa cgcattttac gacgttgccc ctgccggatg gcgctacgat tatccggcct
    14461 acaacgtggg cctgcggtcg aaaccgtagg gcggataatc gtagcgccat ccgccaattc
    14521 gttaattaat acagcgcctt accgttgctg tcttttatac tggtcttcca ggcggtacga
    14581 acctgatcaa caacgttatc cggcaggctg gcgtagtcca gatcattcgc ctgtttagcg
    14641 ccatttttgt aggcccagtc gaagaacttc aacacttcag caccctgctc aggtttcttt
    14701 tgcgctttgt ggaccaggat aaaggtggtg gaggtgattg gccacacatc gtcacctttc
    14761 tggttggtca gatcctgcgc gaaggttttg ctccagtctg cgcctttcgc cgcattagag
    14821 aagctctctt ccgtcgggct taccggtttg ccgtcggcag aaaccagttt ggtgtaggcc
    14881 aggttgttct gtttagcgta agcgtattca acgtagccga tagcgcctgg cagacgctgt
    14941 acaaatgccg cgatgccgtc gttaccttta ccgcccagac cggttggcca gttcacggta
    15001 gaacccgcgc ccactttcga tttccactcg tcgttgactt tcgccaggta actggtgaac
    15061 acgaaggagg taccggaacc gtcagcgcga cgcaccacag cgatattctg tgagggcagc
    15121 ttcacgcctg ggttcagttt ggtgatggct tcatcatccc acttcttgat tttaccgagg
    15181 tagatgtcac ccagcgtttt accatccagc accagttcgc cggatttgag gcctggaata
    15241 ttcaccgcca gcaccacgcc gccgatcacc gtcggaaact ggaacaggcc ttcctgattc
    15301 agtttttcgt cagacagcgg cgcatcggaa gcgccaaaat caacggtatt cgcggtaatt
    15361 tgtttcacgc cgccggaaga gcctatcccc tggtaattga ctttgttacc ggtttctttc
    15421 tggtaggtat ccgcccattt ggcatacacc ggcgcaggaa acgttgcacc ggcacctgtc
    15481 aggcttgctg ctgcaaaggc agagaacgcg ctcatcgata aagtcgcggc gacaacagtt
    15541 gcgacagtgg tacgcataac tttcataatg tctcctgcac ggtttcggta aatcgttgtt
    15601 tgagttgcta cgatgagcaa aataggacaa attgatgaca gttatatgtc ttgattatga
    15661 cggtttgatg acaatggaaa taaaaaagct ggcccgggga gacaccagac cagcctgcag
    15721 ggggagatga attaaactgt ttgcgcaacc gcagacggtt tcaacagcgc gtacatcagg
    15781 ccgcagacaa tcgtgcccag ggcaatcgag agcaggtact gcatcacatg ttctaccgca
    15841 tgcgggatcg ccaggacaaa gagaccaccg tgtggcgcca tcagtgtaca accgaaatac
    15901 atggacagtc ccccggcgat tgcgccaccg accatcgtgg aagggatgac gcgcatcggg
    15961 tcacgcgcag cgaagggaat cgccccttca gagataaagc acagccccag gataaaggat
    16021 gcgttacccg cttcatgctc agaggcagtg aatttcgctc tggccgccca ggttgcgacg
    16081 cccatcccta atgccggtac catccctgcc gccataatgg ccgccatcgg catataggaa
    16141 tgagaagcca gtaaaccgac gccgaaggta tacgcagctt tattcaccgg cccaccaagg
    16201 tcaaaacctt gcattgcgcc cagcaacatt cccagcaaga tagcattcgt agaggtcata
    16261 ttccccagga acgtcgtcag cccttccatc accgcagaaa cggggccacc caccacgtaa
    16321 atcatgatta ggccggtaat cagcgtagac agtagcggca gaaccagtac cggcttaagc
    16381 gcttccattg acgctggcag cttaatattt tgcgccagaa accgtacgct gtaaccggcc
    16441 agaaaaccgg ccacaatccc tcccaggaaa ccagcaccgc acaggctggc caacatcccg
    16501 ccaataagcc ccggggccag acccggacga tcggcaattg agaaggcaat aaacccagcc
    16561 agtaccggca ccatcagcgc aaaggccgcc ttaccaccga tttgaaataa cgcagccgcc
    16621 agcgtgcccg gctcattgaa ggcctggata ccgaagacaa aagagagcgc gatacataac
    16681 cctcccgcca ccaccaaagg aagcatatgg gatacgccgg tcattaaatg cttataaacg
    16741 ccgggtagct ctgttttacc agctgaagaa gagcgcccgg cactcccctg atagacctcg
    16801 gcgctattga aagcattatc catttcctgc gcactctttt ttagcgccgc gccggtactg
    16861 gtgcgataga gtcttttgcc aacaaagcct gacagatcca gctcaatatc cgccgcgata
    16921 atcaccacat ccgcttgcgc tatctcttcc gcggtcagcg tgttcttcgc cccgacggaa
    16981 ccgcgggttt caaccttgat ccagtcacca cgcttgcggg cttcaatttc cagcgcttcg
    17041 gcagccataa aggcatgggc gacgcccgtc ggacaggccg tcacagcaac aattttttta
    17101 gtcatagtag gataccctgt tcttttaatt taaagaaaaa gcgggaaaaa atgttacaga
    17161 cgtgaccagg ccgcggcttt ctggaacagt gcgtcatccg ggcgaatccc ggtataaagg
    17221 acaaattgct ccacggcctg aatagcaaac acttcggaac cgataatcac ggttttaccg
    17281 cgttcacggg cgtagcggat tagcggcgtg acgggcggta gcgccaccac atcaaagata
    17341 acgctcgcct tatccacttc ttgttcggaa taagagagtt tgtcggcatc attaccgcca
    17401 gccattccga taggcgtggc gttaattaac aaatcggctt caataccgtc ggtatccggg
    17461 cgccattcat agccatagag ttcggccagt tgtttacctg acgcttcatc aatcgcgaca
    17521 atataaccac gggtaaaccc cgcatccttc agcgcgcagg ccaccgcctt tgccatacca
    17581 ccgctgccac gcaaagcaaa cacctggtcg ggagagacct tgtaattcgc cagcaagcga
    17641 gctattgcaa tgtaatcggt gttgtacgcc ttagcggaag catccagttc atccaccagc
    17701 ggaatgcagg cttccttaaa tggcatagag atcgcgcacc cacgtatccc cagcccgcgc
    17761 acgccgctaa tggcctgcgt aagatcggtc ggcgagaaag ctttgtagag ataattgaga
    17821 tccagcgctt cgtacagata gttgtgaaag cgtgtaccga agttacttgg gcgtgcagcc
    17881 agggacatgc agacctgagt gtctttatta atgcgctttg tcatgatgaa tcctcataga
    17941 agttgcgata gagaaaatca tcggctaaaa aggggatatt aaaaattgct cattcccgtt
    18001 cgggaaattt catcttttat ggcaacccgg cacactgaac aaaaatactt aaagctactc
    18061 cagcactatg gcgataagcc cgttagcgtg acgctacagg agctggcgga tgtgttgttc
    18121 tgcacccggc ggcatatgcg taatctgttg cttcagatgc aggaggcaaa gtggctcatc
    18181 tggcaatcac aggccggacg tgggcatcgc gcccggcttc acctgcgcta taaaccagaa
    18241 cagctgttaa gcgaaaaggc ggagcagttg ctggagtctg gtcatgttga tcaggccatt
    18301 cagctgctgg gtaaaaataa gcaccaggtg gcgcaactgc tgcgctcaaa actgggctat
    18361 agcgtgcggg cagactatca gcggctgtgc atcccctatt accggacaat gccgtcgctg
    18421 tgccccggca taccgttgcg tcgctctgag cagcatctgg tcaggcagat ttttagcggc
    18481 ctgacgcgca taaatgagga aaaaggtgaa gtcgaagccg atcttgccca ccactggcgg
    18541 cagattgatc cactgcgctg gcgtttttat ctgcgccccg ccgtcctctg gcatgatggt
    18601 caggagctga cgatcgacgc ggttatcgct tcactgaccc gcagcgctaa gctgccgttg
    18661 ttctcgcact tgcagaccat tcaggccacc gggccgctga gccttgaaat tacgctggcg
    18721 cacccggata accgactgcc gctgctgctc agccatattg atgccatgat cctaccgcct
    18781 gaccatacac aacgcgctga tttcccggca catcctgtgg ggactggccc ttatgaggtg
    18841 gtggaaaaca atggctttca tctgcaaatg aaggcctttg accactattt cggcctgcgc
    18901 gggctgctgg atgaagtgga ggtctttatc tggccgaatt taacggagac agacaacctg
    18961 gcggaatcgc tgtcggataa cgacacggca gcctggctca gttccagcct gagcgatgag
    19021 gattacgttt ccggacggct tagccaggta tcaggcaaac cttctgacaa cctgcgcgag
    19081 atgtttcttg agcgtggagg atatttttta ttatgcgaca gccgctcccc gcactggcat
    19141 accgccgaac atcgccgctg gctgcgggaa actctcagcc cttacgcctt actccagcat
    19201 ctgagtgagg caattcgccc cttctgggta ccgggcggca gcctgctgtc ctcctggttt
    19261 catactattg aggcgggccc ggcctgttca ccttttatct cgtcgtcgcc ctacgcaaaa
    19321 cttcgtctgg cctatcacga tcagcaccct gaatttccaa tgctcctgga tattatgcaa
    19381 gagatcatgc gccagcaggg cattttactt gagggcgttg agctgaatta tgatgactgg
    19441 gcgaatggca aaaccaatgt ggatctctgg ctggggacgg tcaatttccc cattcccgaa
    19501 gagtggaacg tcggtacatg gctactgggc tcccctttac tgcgccacgc catcagcggt
    19561 ggggatgatg cgctgctggc ccaatgggaa acccagtggc atgccgaaac catcagcgcg
    19621 gaacaactgg tcagggaaac cacccgttca ggctggctac agccgctttt tcaccactgg
    19681 atgcgactca aaagccccga ccgggccagg gggatccacc tgaataacct gggatggttt
    19741 gatttccgat ccacctggat tgagccaggg ccgtagttca ttgatatgac ttattttgta
    19801 attagattag ttcgttattt ccagcgtgat cgtggcgtaa gcttcaaatg taccaggttg
    19861 aggccgcgct cccgtcgcgc tggcaggcgc ggcagaaaaa gtcaatgagt tagtctcggc
    19921 gccgccatta ttgacgccca tatccatatc catttttccg cctgtcacct taaccatccg
    19981 atcccatttg tcataaatca taattccgac atcatcatta cccagaactt tcatcatatt
    20041 tgcgctggaa tcaacgggat cagcattaaa tgtcgaatag acgatattct catccaacat
    20101 tccggtacat ttcacctgta ccgttttagt cactttatga cccgcagcag cggtgccttg
    20161 cgttgtcgag aaatccgcaa ccgggatctt accgaaattc acctctatca cctggccgga
    20221 atcaatttca cagctctgcg gcgccacgat atcgccaaca attctgactt ccgccaattt
    20281 gtcggtactg gcagtcgagg agctggcatc aagccccccg tataaattag ccacaatcgt
    20341 gccaggaatg gcaacctgac cgacaaacgg tttattgata aggaaagaga ccttgacctc
    20401 cgacccggta tataacgttg cgagattgcc ctcaacggta tcggtataac aattcatccc
    20461 atcttttact acattaggtt cagcctcaaa gggaaccgca ataaagcctc gtccaagaac
    20521 agcaatcgac gttgcaatac ttaggttatc gttaagcgta tagtaggtgt aaccatttct
    20581 ggtggtatca atactcagcg gcgaacgagc ggtataatag acttcacgaa acgtcgatga
    20641 aaaatgggtc aaacagctac agccaacttt atatgattct gacgatgtta atgtctccag
    20701 atccctgacc tctgttccgg ctttattttt ttctgcggga atccgggcgt cattgagatt
    20761 aaggttataa atataagtcc ctttaaccgc atgacaaatg ccatcgccag cccggcaaac
    20821 aggcgaaata agaaccataa agcatgaaaa taatattatt gtccataagc gcataattaa
    20881 attccttatt ggcaagtgac ggcttgctgc accagttcag cattctctgt tttatgacct
    20941 aacgtataat taacggcaca tgttgttgat tcatcaccgc cccaacttag agtgaaatga
    21001 ccgttttccg gcatccccga taaatagagt tcgccgttat cgccgacaat cccggttacc
    21061 gttccggaat ccagctccgc cgacgccatc gcgccaaacg gcgcaggttt gccattcact
    21121 tgcatcacat taaacaacac gcgataaccg acatgcgtca caaacgccgc tttcaccacg
    21181 gcgccgcgcg ttggcaccag attgactacc gtgttatcca gctcaatatt ggctttggca
    21241 aaatagttgc tgtcaatcgc catgcggttt tcgtcgtacg ggttaagctg cgttttcacc
    21301 gtatagcccc gccagtctgt agcaacccca gtcgtgtttt ctacggtaag gccatcagca
    21361 cccggcgctt ccaccagcgc gacggtttcc cccaactcct gcgagaaggt cacaccgccg
    21421 ctgtgaacca ggatgccgcc gcgggcgcca tagttcagcg tttgtgaatc acggctccag
    21481 gcataaccgc cgtttactga accataagta ccgtcatacc ccatgctggc gttaccacca
    21541 taggtatcct ccggcgtact ggtccaggat tcctgcacgt tataggaaag attgtggccc
    21601 tccagcaacg tgccgccaac gccagcctgc attgtgctgt cgttatgatt attttgcgtc
    21661 atcgagtagt taacgtagct gctctccttc gcccctgaaa gcgggatgga aaccgtcagc
    21721 atgaatatct gttcgtgatc gctgtcatcg ttgtcgtttt tattattgct gccggaagaa
    21781 cgattcgcag agtcggtata gttccacgac gcgttccacg aaattcgccg ccagctattg
    21841 ctatagccaa actgcaccag gcgctcgact tcatccgttt gccagtattg ctgacggctt
    21901 aacgtcagat aaatgttgcc aaaaccgggg ccaaatgatt gcgtccaggt tccttccacg
    21961 cggctacggc ggttgcccgt ctcccagaaa tcagagctgt tgtcctgcct cgatgcccac
    22021 tcgccgaggg tgtaatagcc ttccgtggaa taacggtacc ccaccagacg gaaactggtg
    22081 tcggtatcat caaaacgttt ggagtagaga aaacgccagg actggccgct ttcattatca
    22141 ccatcgtcaa agtgtgaacg ggcgtgggtc acatcaaacg atacggcccc gatcgacccc
    22201 atatctttac ccataccaag cgcggcggaa gcataatctt ccgcaacctg cgtgccgcca
    22261 tagagcgtta atccccatgg caggccatgc aacacctgcg cctgaacgac gttaggggta
    22321 aatccgcttt catcgcgcat ttcaccgacg ctaatatcaa aatcggtctg gccttcacgc
    22381 ttcagtatcg ccagcgacgc gtacggctgg gtaaagtgct gctcgctgcc gtcttcttct
    22441 tttatggtga catcaagatc gccgccgccg ctggtggtgt tcaggtcggt gatctcgaaa
    22501 gcgccctgcg gcacggctga ctgataaatg acatatctat tctgccggat gatgacggtg
    22561 gcgttacttt tcgccacccc gcgaaccact ggcgcaaacc cgttctggct cgacggtagc
    22621 atgtcatcgt cggtatagag tctgaccccg cggatctggg cgctatcaaa gacataactc
    22681 gccgtccagg tgtcgccgac cataatctgg ctgcgcagcg cggcgatatc gcgctggaca
    22741 tagctactga tggagtgata ttccgtgtcg ctgccggtgg cgctcagcgt actgtagtta
    22801 cgcaaccgcc atgctcccag gttaatcccg ttacgcaggt tcagataata agagtcatcg
    22861 ttcccattgt cgtaattaga ctttaccgtg tgcgatccgg aaaaatctta attgaccatc
    22921 atcgcattga tgccctcatc ccagcgtgac gggctgatat agtcataggc cgccgtgttc
    22981 agatagatct gtggaacaga tatatttaac gccagcttat tcgcatctaa taaccaggtg
    23041 gtgccatcaa ttaacggaac gggattcacg caggctgtat tatcgacatc ctgcaagcct
    23101 ttcaccgcgt ctaccttaac accatacgac gacaatacat ccttaaccgc gacaaagcag
    23161 ggatgcagtt cggcatccgg ttgatcctgc acaaaggtca catcccgtcg ttcaaacagt
    23221 ttcccgttaa tgacgatatc gaccttataa tcgcccggcg gcaacgcgtt ggaacggtta
    23281 aactgatgaa tatccacgtc cacggggtga tcgatttcca gcaaaccagg gttaaatagc
    23341 gtttccctag ccattgtcgg gaaagcgata ctcagataag cacctgaaat caagacgagg
    23401 caaagacgag ggtgaatcat caagatatcc ttatcgcaaa actaaagcgc ttgcttaaca
    23461 gggctactaa tcgcgccgta atcattaata aaacgccagg ctaaagcgtg ccccgtaaca
    23521 ccagtaggta aatccagcgt taatttttca aaaggcttta tcatattcaa tggaacatct
    23581 ttaccgtcta cagagacatc catgatattc atatgaatag gactattatt ttctacaacc
    23641 agtttacttc cctgtcgata ccatttgact ttagctaccg ccttttccgg gataagcgta
    23701 atagaggccg ggcgccagaa taacttgata cgcgttttaa ttgcgatctc aagcgtactg
    23761 ctatctttat ttttactgga tggcggaatg tttttcacat taaaccaaaa aacagattcg
    23821 cgatcctttg gcaactcacc cgctgtttta ataatgcgca gcactttttc ctgactcggc
    23881 tcaagacgag aaacaggcgg aatgacggta aaaggtggtt tgctcttatc atccttactg
    23941 aaaggatcaa cccatacttg tattagataa ggcaaatcaa cttctttatt gtaaatagaa
    24001 atagtagagt caggatcgtt gccatgaaaa atgacgcgag ttccaccgac cacaatacct
    24061 gcaaaagcag agggaagatt aaggcacagg agtgccagaa taactatttt tattccacga
    24121 gcaaacatag acaaactcat ccctggataa aaaagacgcc gggcatttat acaactacag
    24181 ttgttcacaa tggcaggcgt caataaatta ataaaagacg tttaagaaga gcgaatctta
    24241 tttttggtat tcgacagtga actgagaatc tgcgttagca gtacccgcag tgacggttgc
    24301 gtcagtggcg atataacgcg cgataaactc catagaagcc gtacccgctg tggtatcaat
    24361 cgtgctatac gcagaatcgt tgtacagttt aacttgtgag ttatccgcgc ggttgtaaat
    24421 acggatcgct acgccagatg ctgtaatggc agcgccgtca ccggtgtaat cacccggggc
    24481 atcgccatta gcagggttgc cgatagccag gtcgccatcg ctgttggaag cttcggtacc
    24541 atcaaaacga acggcagcct tagtatacgt agccgggcac ccggtcaggt cgatatggaa
    24601 ctcggtaggc gcagcggtac ttcccacgcc agcaaatgcc gttttgttaa ctttgcctaa
    24661 attaacgttt tgatcagcgg tttgtggcgt aacctggcag gtgctgtcaa ccacttcacc
    24721 aaggaagtga acggtgccat cagatgccat tgcattacct accagcatag tagaagacag
    24781 aaccagagcg ctggcaatta aattcagttt cattataact ctattgatat attatatatc
    24841 ccgatgtttc atttaaaaat aaataaaaca caatgtgtct acaacggaag cgaatactac
    24901 tcccgagaaa ataaatatca agcagtcaaa tttacacaat ggaattgttt gagtgaaata
    24961 acaggcaata ttatcttttt aaaattttat ttttactaaa ccaaagaata taaataatta
    25021 tatacaaaca ctaaagtcag agacatttaa cgtacatatt tttaggaaaa aatttatttt
    25081 ttagtttaac aatcaaacaa ttgtttattt atcaaccact attccgttat tctcatctcc
    25141 cgtaaatatt ttttattttt gttcaaaaaa ctcataaaaa aaggccgtct atcgacagcc
    25201 ttttttttgg tacaacattt gacttactct accgtcaccg atttcgccaa gttacgcggc
    25261 tggtcaacgt cggtgccttt aatcagcgcc acgtgatacg ccagcagttg cagcggaacg
    25321 gtgtagaaga taggcgcaat gacctcttcc acatgcggca tctcaatgat gtgcatgttg
    25381 tcgctgctca caaaacccgc atcctgatcg gagaagacgt acaactgacc gccacgcgcg
    25441 cgaacttctt cgatgttgga tttcagtttc tccagcagtt cgttgttcgg cgccaccaca
    25501 atcaccggca tatcggcgtc aatcagcgcc aacggcccgt gtttcagctc gcctgcagca
    25561 taggcttccg cgtgaatgta agagatctct ttcagcttca gcgcgccttc gagcgcaatc
    25621 ggatattgat cgccacgacc gaggaataac gcgtgatgct tgtcagagaa atcttctgca
    25681 agcagctcga tgcgtttgtc ctgcgacagc atctgctcaa tacggctcgg cagcgcctgt
    25741 aggccatgca cgatatcatg ctcaatggac gcatccagac ctttcaggcg agacagtttc
    25801 gccaccagca tcaacagcac ggttaactgg gtggtgaagg ctttggtaga tgctacgcca
    25861 atttccgtac ccgcgttggt catcagcgcc agatcggatt cacgcaccag cgaagagccc
    25921 ggcacgttac aaatggccag agagcccaaa tatcccagct ctttcgacag acgcaggcca
    25981 gccagggtat ctgccgtttc gccagactgg gagagcgtga tcatcaggct gttacggcgc
    26041 acggcagatt tgcgatagcg gaattcagag gcgatttcaa cgtcgcacgg aatacctgcc
    26101 agcgattcaa accagtaacg ggaaaccata ccggagttgt aagacgtacc gcaggcgagg
    26161 atctgaatat gctcaacctt cgacaacaga tcatcggcgt tcggtcccag ctcgcttaaa
    26221 tccacctgac cgtggctgat gcgcccggta agggtgtttt tgatcgcgtt cggctgttcg
    26281 tagatctctt tctgcatgta gtggcggtaa atacctttat cgcccgcgtc atattgcaga
    26341 ttggattcga tatcctgacg ttttacttcc gcgccggtgt tatcgaagat atttaccgaa
    26401 cggcgagtga tttcagcgat atcgccctct tcaaggaaga taaagcgacg agtcactggc
    26461 aacagcgcca gctggtcaga agcgataaag ttttcgccca tacccaggcc aatcaccagc
    26521 gggctacctg aacgggcagc cagcagcgta tccggatggc gggtatccat gatcaccgtg
    26581 ccatatgcgc cacgcagttg cgggatcgca cgcaaaatcg cgtctcgcag agtaccacct
    26641 tgtttcagtt cccagtttac caggtgtgca atcacttcgg tgtcggtttc agaaacgaag
    26701 gtatagccac gcgcttttaa cgcttcacgc agcggttcat ggttttcgat gatgccgtta
    26761 tgcaccacca caatgtgttc agaaacatgc ggatgcgcgt tagcttctga aggttcaccg
    26821 tgcgtcgccc agcgagtgtg agcaataccg gtgccgccat gcagcgggtg ttcttccgct
    26881 gcctgagcca gcatctggac tttaccgagg cgacgcaggc gggtcatatg accttctgca
    26941 tccaccacgg ccagaccggc agagtcgtaa ccacggtatt ccagacgacg taaaccttcg
    27001 agaaggattt cagctacatc acgctgcgcg atagcgccaa caattccaca catagtttta
    27061 tttcctgatt atggcattac gccatgcgtt gtcgctgacc tgtatgcccg tcgttgcggg
    27121 cgccccgagc cttgtagaga gtggggttat ttttataagt actgctcatg gagcggagga
    27181 ttattttatc ctctcatctc cggtctgccg gatggcgctg acgcttatcc ggcctacaaa
    27241 atcacttttt cttcaccgga cgctgccagc cttgcttatg cacctgcggc acgcggctta
    27301 ataccagttc attgtcggct acattacggg tgacggtagt ccctgcggcg atggtggccc
    27361 ctttaccaac agtaaccggc gccaccagtt gggtatcgga gccgacaaac acatcgtcgc
    27421 caataaccgt tttgaatttg ttcgcgccat catagttaca ggtgatggtc cccgcgccaa
    27481 tattcacgtt gtcgccaatt tccgcatcgc ccaggtaggt cagatggccg gctttagaac
    27541 ctttacccag acgcgctttt ttcatttcaa caaaattgcc gacgtgagcg cccgctaaca
    27601 gctcagcgcc gggacgcagg cgagcaaacg ggccgatggt gcaggccgct tccagatgcg
    27661 catcttccac cacgctgtat gggctaattt cgcagtcatc gccaataacg ctgtttttaa
    27721 taatgcagcc cgcgccgatc ttcacgcggt gaccgagcgt tacataacct tcgatgataa
    27781 cgttagcgtc aatttcgaca tccattccac aataaagggt gccgcggaga tcaaaacgtg
    27841 ccggatcgcg caacataacg ccggataaca gcagtttctc cgcctgttcg gcctggtaaa
    27901 tacgctccag acgagaaagc tgtagacggt tattcacgcc gtccgtttcg ctgatgcgag
    27961 ccggatgcac cgcggcgatt tcccgtcctt cctgataagc cagcgcgatg atatctgtga
    28021 tgtaatattc accctgcgca ttattgttag tcagcttaga caaccagcgt ttcaggtccg
    28081 cgccgttggc gatcagaata ccagtgttaa tttcctggat ctgacgctgt tcatcagtgg
    28141 cgtctttatg ttcaacgatg ccggtcactt taccgttttc acgcgtaata cggccatagc
    28201 cgctcggatc gtccagcttc acggttaata acccaatacc accctgcggt ttggcatcgc
    28261 gcaggcgctg taaggtttca accgaaatca gcggcacgtc gccgtaaagc attaaaatat
    28321 cttcatcgtc gctaaaaaag ggcgcggcct gctgcattgc gtgacctgtt cccaactgtt
    28381 ccgcctgaag cacccagttc agcttgtcat ctttcagggt ctgttttaac aactcgccac
    28441 cgtggccata gaccagatga acctgtgcgg cccctaattt agtagctgca tcaatgacat
    28501 gctgcaccat gggtttaccc gccagcgtgt gcagcacttt aggaatatcg gaatacatgc
    28561 gcgtgccttt acctgcggca aggatcacta cgctcatagc actatttaac atacgcgtcc
    28621 tgactgtaat ttgagaacga atttatactg tttcacgttg aaaatactac atttttttca
    28681 tcgtaaaatg gaagaaggat aaaacgctca ccgggataaa atccccgcct gctaatgaat
    28741 cattttcgtt cattaccgcg cctcttgtct cctgaaaagt aaaaacaccc gcgtattggc
    28801 aacgtagtcc gatgtttttg ctgttttttt actccataaa taaagaagat aacgaaataa
    28861 agcgcagggg agtcagaaaa gcaaaaacca gcgacagagg ccgctggttt tccgttgcgc
    28921 gtatttttta cttaattacg cgacataaaa atccgcaaaa tataccagaa catggtcgcg
    28981 atagaagcaa acagatgtaa tgccgcgcca gcagggcgat cggtagggta atggtgaata
    29041 atgttagaag tgtcgtaaag tataaacccg gcgcacagca gtaccattag cgcagaaaac
    29101 cagacgccca gcgaaaagcc gcagatgacg ctggcaataa tcgcgccaaa agcaatgaat
    29161 ccagccatag tcagaaacga gcgcagaaaa gaaaagtctt tttttatgga aaacgcggta
    29221 aacgtcagac cgccaaccag caacaggggc gttattgccg ccgcgccaat gctcgacggg
    29281 ttaatatacg ccgccaccgt taacaggggg gcaaaaatca gggattctgc caacacataa
    29341 atccccagcc cgataagttg cgtttgatta gtccccgcat tatccgccag acgggtcgcc
    29401 agcattccca ccagcataaa agcgccgaga acaaccaacc agctatatct tccaccagcc
    29461 agcagcacat caagcgcata ctccccgccc cctataaaac tccacgccgc gctcaacacg
    29521 ataaaaccga cgatggcgac ggcgagatga agataagcgc gacgaataaa ggtagtacga
    29581 tcaatccttg agtcgggttg tggccccgca aaggatggct gaaatgacat agtaataatc
    29641 cctcatttta tgcaataaaa acgcatccat tccttccttc ttcgcacaat gtgcagatgc
    29701 caatgacaga aagaaggatt taatgaaaac agcgctgtcg ctgaaaacgc atcgccttca
    29761 gccgcttgtt tttgtcgttg ctagtttatc gaataaaaat tgagaggata aaaaaaacca
    29821 gtccgcaatc agactggttt tatgctttca agccggtgtt acatcgcttt tttggtcaac
    29881 tcgataacgc gcagtttagc gatcgctttg gccagttccg cagacgcctg agcgtaatcc
    29941 acgtcaccgt gcgagctctt aatgtgctct tcggctttac gcttcgcttc cagggctcgc
    30001 gcttcgtcga gatcctgacc gcgaatcgcg gtatccgcca gaacggtcac actgccaggc
    30061 tgcacttcca gaatgccgcc ggacagatag ataaactctt cgtgaccgtg ctgcttaacg
    30121 atgcgaatca taccaggctt aatggcggtg agcagcggcg cgtgccccgg gtagatcccc
    30181 agttcacctt cgctacccgt aacctggatt ttctcgacca gaccggagaa catttgttgc
    30241 tccgcgctga cgacatccag gtggtaagtc attgccatat caccctccga ttaaggcgtt
    30301 aaagtttttt ggctttttcc acggcttcgt cgatggaacc gaccatgtag aacgcctgct
    30361 ccggcaggtg atcgtattcg ccttccatga tgcctttaaa gccacggatg gtgtctttca
    30421 gggagacgta tttgcccgga gaaccggtaa atacttccgc cacgaagaac ggctgggaca
    30481 ggaagcgctg gatcttacgc gcgcgagcta ccaccagttt atcttcttca gacagttcat
    30541 ccataccgag gatggcgatg atgtctttca gttcctgata acgctgcagg atggactgaa
    30601 cgccacgcgc ggtgtcgtag tgttcctgac caacaaccag cggatccagc tgacggctgg
    30661 tggaatccag cgggtcaacg gccgggtaga tacccaggga tgcgatctga cggctcagta
    30721 ccacagttgc atctaagtgc gcaaaggtgg tggctggaga cgggtcagtt aagtcatccg
    30781 caggtacgta taccgcctgt acggaggtga tagaaccggt cttggtggag gtgatacgtt
    30841 cctgcagaac gcccatctct tccgccagag tcggctggta acctaccgcg gaaggcatac
    30901 gacccagcag tgcggatact tccgtaccgg ccagggtgta acgatagatg ttatcgacga
    30961 acagcagtac gtcacgacct tcgtcacgga atttctccgc catggtcagg ccggtcagtg
    31021 caacgcgcag acggtttccc ggcggctcgt tcatctggcc atacaccagg gatactttat
    31081 cgataacgtt ggagtcggtc atttcatggt agaagtcgtt accctcacga gtacgttcac
    31141 ctacgcccgc aaacacagag taaccggagt gctcgatcgc gatgttacgg ataagctcca
    31201 tcatgtttac ggttttacct acacccgcac caccgaacag accgacttta ccgcccttcg
    31261 cgaacggaca catcaggtcg ataactttga taccggtttc cagcagttcc tgagagtttg
    31321 ataactcttc gtaggaaggc gctgcgcggt gaatcgccca acgctcttct tcgccgatct
    31381 cgcctttcat gtcgaccggt tcgcccagga cgttcatgat acgacccagc gtagctttac
    31441 ctaccgggac ttcgatcggg tgttcgagat cttttacatc cagaccgcga cgcagaccgt
    31501 cagaagaccc catcgcgatg gtacgcacga taccgccgcc aagctgctgc tgaacttcca
    31561 gcaccagctt ctcattacca ttctgcacct caagggcatc gtacacgcgt ggtacggcat
    31621 cctgagggaa ctcgacgtct accacggcgc cgattacctg gacaatcttt ccagtagcca
    31681 tcttaaatcc tctacgaaat aacctggtta aaccgcggcg gcccccgaga cgatctcggt
    31741 gagttcctga gtaatgctgg cctgacgagc tttgttgtat actaactgca gctctttaat
    31801 caggctgccg ccattatcgg ttgcggcttt catcgccacc attcgtgcgg cctgctcgct
    31861 ggccaggttt tctaccacgc cctgataaac ctgagactcc acataacgac gcaggagagt
    31921 atccagcagc gctttcgggt ctggttcata caggtaatcc caggctgtac gcttcagatc
    31981 atcatcttct gacgccggca gcggcagcag ttgagtgatc gtcggcacct gagacatggt
    32041 gttaataaat ttgttgctga caatgtaaag cttgtccaga cggccttcgt cgtaggcctg
    32101 caacatcact ttaaccggac cgatcagttc ggacagagaa gggttatccc ccatacctgt
    32161 cacctgagcg acaacgttgc cgcctacgga attaaagaat gacacgccct tagagccgat
    32221 cattgcgagt tcgcactgaa cgcctttatc ggaccatgcc ttcatatccg ccagcagctt
    32281 tttgaacagg ttaatgttca agccaccgca caaaccacag tcggtcgaca ctaccaggta
    32341 gcccacgcgt ttaacgtcgc gctcttccag gtaggggtgc ttatattcca gattaccgtt
    32401 cgcaaggtga ccaatcactt tgcgcatggt ctctgcataa ggacggctgg ccgccatgcg
    32461 atcctgcgat ttacgcattt tggaagcggc gaccatctcc atcgctttag tgatcttttg
    32521 cgtgttctgg acgcttgcga tcttactacg tatctctttt gcgccggcca tgagcttctc
    32581 ctcaatgcct tacggcctgc cctaaggcaa gccgccagac gttaccagga ctgggttgct
    32641 ttgaaggaat cgaggatgcc tttcagcttg ccttcgattt cgtcgttata gccaccggac
    32701 tggttgatct cttgcatcag cggagcgtga tcacggtcga cgtaagccag cagtgcggct
    32761 tcgaagctac cgattttcgc cagttcgaca tccgccagat aaccacgttc tgctgcgaac
    32821 agaaccagag actgctgcgc gacggacatc ggcgcatact gtttctgttt cagcagttcg
    32881 gtcactttct gaccgtggtc aagctgttta cgggtggcat cgtcaaggtc ggatgcaaac
    32941 tgagagaacg ccgccagttc acgatactgc gccagcgcgg tacgaatacc tccggacagt
    33001 tttttcatga tcttggtctg ggctgcgcca cctacacggg ataccgagat acccgggtta
    33061 accgcaggac gaataccggc gttaaacagg ttagattcca ggaagatctg accatcggta
    33121 atggaaatta cgttggtcgg aacgaacgcg gaaacgtcac ctgcctgcgt ttcgataatc
    33181 ggcagcgcag tcagtgaacc ggttttccct ttcacttcac ctttagtgaa ggcttcgacg
    33241 tagtcggcgt taacacgcgc agcacgctcc agcagacgag agtggaggta gaatacgtcg
    33301 cccgggaatg cttcacgtcc tggcggacga cggagcagca gggagatctg acggtaagca
    33361 acagcctgtt tagacaggtc atcgtaaatg atcagcgcat cttcaccgcg gtcacggaag
    33421 tattcgccca ttgcgcaacc ggcatacggc gccaaatatt gcagcgcagc ggattcggac
    33481 gcggtcgcca ccacaacaat ggtgttagcc agcgcgccgt gctcttccag tttacgcacc
    33541 acgttagaga tggtggacgc tttctggccg atagcgacat agatacattt gatgccggag
    33601 tcgcgctggt tgatgatggc gtcgatagcc agcgcggttt taccggtctg acggtcaccg
    33661 atgatcagtt cacgctgacc acgaccgatt gggatcatgg agtcaacggc tttatagccg
    33721 gtctgcaccg gctgatcgac agactgacga tcgataacgc ccggcgcaat cgcttcaacg
    33781 gcagagaagc cgtcattatc aaccggacct ttaccgtcga ttggcgcacc cagggtgttt
    33841 accacacgtc ccagcagacc gcggccaacc ggaacttcca ggatacgacc cgtacattta
    33901 accttcatgc cttcggcaag gtcagcgtat ggacccatga ctaccgcacc cacggagtcg
    33961 cgctccaggt tcagtgcgat agcgtaacgg ttacccggca gggagatcat ttcaccctgc
    34021 atacaatcgg ccaagccgtg aatgcggata acaccgtcac taacagaaac aatagtacct
    34081 tcgttgtgag cttcgctcac cacattgaac tgagcaatgc gctgcttgat cagttcgctg
    34141 atttcggtgg aattcagttg catgctccag tccccttaag actgcaagac gtctgcaagg
    34201 cgctcaagac ggccgcgtac gctgccatca atgaccatat cacccgcccg gatgataacg
    34261 cctgccatta cagacttatc gattttgcaa ttcagcttca ctttgcgtga cagacgtttt
    34321 tccatcgcgg cgctgatttt cgaaagctgc tcttcactca atgcggttgc cgacgtaact
    34381 tctacctcgg aggtagcttc actggcggca cgcagatgaa taaactgctc cagaacatcc
    34441 gggagcgcgt tcagacgatt attttcagcc atcacccgaa tcaggttctg accgttttcg
    34501 tctaactgct caccgcagac tgcgataaac gactcagcga gcgtttccgg cgccagcgcg
    34561 ccagagagaa gctctgccat ttgttcgttc ttggttacct cggcggcaaa cgccagcata
    34621 tcctgccagc gctctacact ttggtgttca acggcaaagt caaaagctgc tttggcgtag
    34681 gggcgagcta ccgtaacaaa ttcagacatc agcccctccc tccttacagt tcagcgacaa
    34741 gtttatccac gatgtcgctg ttagcagctt catccacgga acgttcgatg atcttctcgg
    34801 cgccagcaac agccaggata gcaacttgct tacgcagctc ttcacgggca cgtttacgct
    34861 cggcttcaat ttccgcctgc gcctgcgcca cgattttagt acgttcctgc tctgcttcag
    34921 ttttggcttc gtccaggatc tgagcgcggc gtttgtttgc ctgctcgatg attacctgag
    34981 cttccgcttt cgcttttttc agctggtcgg tcgcgctggc ctttgcaagg tcaagatcct
    35041 tatgtgctcg ttcagcagaa gcgagaccgt cagcaatttc tttctgacgt ttctcgatgg
    35101 ctgccattaa cggcggccat acgtacttca tgcaaaacca gacaaagaga ataaacgcga
    35161 tggcctggcc gaggattgtt gcgttaagat tcacagcaca atgcctctat ctagttaacc
    35221 ttctgatatt gctcttaatt caagcaacgc ttactacgcg acagcgaaca tcacgtacag
    35281 acccagacct acagcgatca tcgggatagc atccaccaga cccataacga taaagaactg
    35341 agtacgcagc agaggaatca gatcaggttg acgcgccgcg ccttccagga atttaccccc
    35401 gaggatgccg ataccgatcg cagcaccgat tgccgccaga cccatcatca cagcggcagc
    35461 catgtacagc agatccatat tcaggttttc catgacagtc tccagtttgt ttcagttaaa
    35521 acgtagtagt gttggtaaat taatgctctt cggacgccat cgacagatag acaatcgtca
    35581 gaaccatgaa aatgaaggct tgcagcgtaa taatcaggat gtggaaaatg gcccacggca
    35641 cattcagaat ccactgtgac caccacggca acagaccagc aatcagaatg aaaatcagct
    35701 caccggcata catgttgccg aacagtcgca gaccgagaga aaccggtttg gacagcagac
    35761 ttaccccttc aaggattaag ttgacaggaa tgaacgccca gtgattgaac ggctgcagcg
    35821 tcaactcttt tgcgaagccg ccgatgcctt tcattttgat gctgtagaac agaataagga
    35881 tgaatacgcc cagcgccatc gacagggtga tgttgacgtc agcagacggc accacgcgcg
    35941 ttgccggcag acccagccaa tgctcagcga tatacggcag caggtcgata ggcagtaagt
    36001 ccatcaggtt cataaggaat acccagacga aaatcgtcag ggccagcggc gcaatcagct
    36061 tgcttttgcc atggtacatg tctttgacgc tgccatgcac aaagccgact atcagctcaa
    36121 tcgcggtctg aaacttgcct ggcacgccgc tggtcgcttt tttagcaacg ctacggaaca
    36181 tcaccagaaa caacagaccc agcaccaccg agaagaacat ggagtcaata ttgagcgtcc
    36241 agaaggtggc tggggggttc tgcggatcca ccagcgagaa agtacgcagg tccagctgaa
    36301 ggttattcag atggtgtcct atgtattcct gcggcgtcat attttctgaa gccatgatgc
    36361 cttttaccct ttgttgttaa ttacagccgg cgccagtatc tgaaccacca gcaccaaaac
    36421 ccacgtaacg atcagcggca aaaacaccgc ctttaaaacc gccaacgcca ccaccagtaa
    36481 aaccagcatc gctaacacct tgaaggcttc accgaaggcg aaagtccagg acacacggcc
    36541 cttagcaggt gtatgcgcct ggtgacgcca ggcaaatatc ataaacaaca tattaggcag
    36601 tgccactgcc aatcccccac atactgcgga gatgccccag aaggggtctt tgaggcaaaa
    36661 cagcaatcca cttgctatta ccgccagaaa ctgaatgaac agaagcttac gagcaacgtt
    36721 tcgactcacg agcgacacag gcatcacgtt tttactcctg ctcacttcga ggtatgccgc
    36781 gtgtcgtata aaacgttctt taagacttag agtcaagcat caaaaagcgg tcaaattata
    36841 cggtgcgccc ccgtgatttc aaacaataag tagccaaaag gtgaataaat gtttaaatat
    36901 ttttctctgg cccgcatttt taacttttag ctaaagtgtg aacgatcgta caaaactgca
    36961 aatagcgcga aaacactggc gataaagcgt gcaccagatc acacattaaa catattcatg
    37021 cttacgcaat tcatttacgt gtcaattcat gccttttcat ctttttgata tttaagcgta
    37081 aaaccaggta ctgttttaaa aataccagct tacaccttaa aaacgcccca ttgacattta
    37141 taataaaaat ttaacaagca aaagtgattt ttcgattcga tttttagcag actgatattt
    37201 acaaagttga ttactctctg ttttaacaaa agaagcgacg ttgtcatgtt gaaacgaaac
    37261 cgtaaatcca gagttaaatg taacaactct gaaatgcgtt atacctgtcg atttttaaca
    37321 caagccgcgt cgttttttct attttttttg ataaaaatta aactttgttt gacttaataa
    37381 tcaccagatg ccgctcgcct tccagttgcg gaacgcgtaa tttttcaaca gattcgacgc
    37441 taaaattgtc aggtagtgag gcaatttcat cccctggcaa ttgccctttt aaggcataaa
    37501 aacgtccttt ctctcccggc agatggtgac accagctcac catatcattc aacgatgcga
    37561 aagcgcggct gataacgcca tcaaacggcg gttcggaggg ataggcttca acgcggcttt
    37621 gaaccggcgt gatgttttcc agtttcagtt cgtgctggac ctgacgcaga aaacgtaccc
    37681 gcttgcccag gctgtcgagt aaggtgaaat gcgcgtcagg gagaacaata gccagcggga
    37741 tgcccggcag ccccggtcct gttcctacat cgataaaacg ctgtccctgc agatacggcg
    37801 caacgactat gctgtcgaga atatggcgta ccaacatttc gttgggatcc cgcactgacg
    37861 tcaggttgta tgctttgttc catttgtgca gcatatcaac gtaggcgacc agcagcgttt
    37921 tctggtgatc ggtaagagaa ataccggcat cagccagcag acgagagagt ttgttgagca
    37981 cggtcattac ctgttaataa tcaaatgccc gatgcgcttt cgcttatcgg gcctacaaat
    38041 ttgtagggcg ggcaagcgaa gcgcccccgc caaattagtg ttatcaagcg ctacgacgca
    38101 gcataccttg ttttttcagc cataccagca gaatggagat tgccgctggc gtaacgccgg
    38161 agatacgcga tgcctggccg atagacgccg gtttatgatc gttcagcttg gcgataactt
    38221 cgttcgacag accggaaacc tgacgataat ccagcgtggc aggcagcaac gtattctcgt
    38281 tacgtagttg tttttcaatc tcatcctgct ggcgagcgat atagccttcg tatttgacct
    38341 ggatttccac ctgttcagcg gcttgctcat cttcaagcgc aggcgcgaat gcggcaagcg
    38401 aagtgagctg cgcatatgtc atttccggac gacgcaacag atcttcgccg ctggcctcac
    38461 gggagagtgg cgtggtcaaa tgcgcattca cttcatcagc ggattccgca gacggcgtta
    38521 cccatgtcga tttcagccgc tgacgttcgc gttcgatatt ttccagcttc tcgttgaagc
    38581 gcgcccagcg ttcatcatcc accagaccca gctcgcggcc catttcggtc agacgcagat
    38641 cggcgttgtc ctcacgcagc atcaggcgat attcggcgcg ggaggtaaac atgcgatacg
    38701 gctctttggt gcccagcgta cagagatcgt ccaccagcac gccgagataa gcctgagaac
    38761 gcgcaggcgc ccagccctct ttgtcggcgg aaagacgcgc ggcattcaga ccagcgagca
    38821 agccctgcgc cgcagcctct tcatagccgg tagtaccgtt gatttgacca gcaaagaaca
    38881 ggccgtgaat aaatttactt tccagagtcg gtttcagatc tcgcgggtcg aagaaatcat
    38941 actcaatcgc gtaaccaggg cgaacgatct tcgcgttctc catgccctgc atggaacgga
    39001 caatctgcat ctgcacgtca aacggcaggc tggtggagat accgttaggg taaatctcgt
    39061 tagaggtcag tccttccggc tcaaggaaga tctgatgctg gttacgatcg gcaaaacgca
    39121 tcaccttgtc ttcgatcgaa ggacagtagc gtgggccgat cccttcgatc acgccagcgt
    39181 acattgggct acgatcgagg ttattacgaa tcacgtcatg ggttttctca ttggtatgcg
    39241 tgatgtaaca cggcacctgt tgcggatgct gaaaagcatt ccccataaac gagaaaaccg
    39301 gcatcgggtt atcgccatgc tgttgagcca acacgctgaa atcgatagta cgcgcatcaa
    39361 tacgcggcgg tgtgccggtt ttcaggcggc tgacgcgtag cggaagctca cgcagacggc
    39421 gagacagcgg gatggatggc ggatcgccag cacgaccgcc gctgtagtta tccagaccaa
    39481 tatgaatttt gccgtccagg aaagtcccga cggtcagcac caccgctttc gcgcggaatt
    39541 tgagccccat ttgggtcacg gcgccgacaa cgcgatcgtt ttcgacaatc agatcttcaa
    39601 ccgcttgctg gaagatcatc agattcggct gattctccag cgcgatacgt accgcctggc
    39661 gatataagac tcgatccgcc tgagctcggg tagcgcgaac ggccggacct ttgctggcgt
    39721 ttagtatctt aaactgaata cctgcctgat cgatcgcttt cgccatcaga ccgccgagcg
    39781 catccacctc ttttaccaga tgtcccttgc caataccgcc gatcgtcggg ttgcagctca
    39841 tctgccccaa cgtgtcaata ttgtgtgtca aaagcagagt ctgttgaccc atacgcgctg
    39901 cggccatcgc ggcctcagtg cctgcatgac ccccgccaat aataatgacg tcaaaaggat
    39961 cctgataaaa catggtaatt gcctcgcata acgcggtgtg aaaatggatt gaagcccggg
    40021 cggtggattc tactcaactt tagccgatgg agaaagcccc gggatccggg ctattaaaaa
    40081 gaagatcttt ttatttagag atctgttcta ttgtgatctc ttattaggat cgcaccaggc
    40141 tgtggataac ccggatcctg taataaagat caatgcgttg gaaaggatca ctagctgtga
    40201 atgatcggtg atcgtggccc gtataagctg ggatcaaaac gggtacttat acacaactca
    40261 aaaagtgaac aaaggttatt ctttggataa ctaccggttg atccaagctt ttcaccatat
    40321 ttatccacaa tagatcgcac gatctttaca cttatttgag taaattaatc caggatccga
    40381 gccaaatctc cgctggatct tccggaatct catgttcaag gatgttgatc ttcagtgttt
    40441 ccccaacctg ttttgcgcca gcgcctttca gttccgcttc tattttctca atcgcgccgc
    40501 aaaacgtgtc gtattctcga ctgccaatgc caattgcgcc gaaacgtacc gcggaaagat
    40561 cgggtttctg cgtctgaagg tcttcataga aaggggtcag gttgtccgga atgtctccgg
    40621 cgccgtgcgt tgagctgatt atcagccaga tcccggaagt tgacagatcc tctaataacg
    40681 gaccgtgcac cgtttcggtt gaaaaaccgg cagcttccag cttttccgcc agatgttccg
    40741 cgacgtattc ggcgccgccc agggtgctgc cgctgataag agtaatgtct gccattgatc
    40801 gctcgctcag gtaaagaggc tgcattgtac tctgtgaacg agctgggatc tacctgtgga
    40861 aaaatgtggg attaaaaaag ccgatcatgg cttgatggtg cgcatgatcg ggttctgcaa
    40921 gacgatcagt gtctcagtgg actgaatttc atcaattgtt tggatcttgt tgataagtac
    40981 gtgctgaagc gcgtcaattg atttgcacat cacttttata aagatgctgt agtgaccggt
    41041 ggtgtaatac gcttccgtca cctcatccag gctttccagc cgggccagtg cggagggata
    41101 gtctttggcg cttttgagga tgatgccaat aaagcagcct acatcgtagc ccagttgttt
    41161 agggctgacg tcaatccgtg cgcccgtaat gatcccggcc tgcttcattt tctcgacgcg
    41221 aacatgaatg gttccagggc taacgccaaa ttgtttggcc agttcggcgt aggcggtgcg
    41281 ggcattttcc attaaggcgt caagtatgcc gcggtccaga ttgtcgatct gataattttc
    41341 catcgctttt tcttatgcag attaatgatt atctctattt tagccattat ttttaacgaa
    41401 tcaaaatcga agttagcttt ttatctgttg attattgaat agtgctctcg ttttgttgct
    41461 taatcatagg caacaggacg caggagtaaa aaaatgaaaa ccgcttacat tgccaaacaa
    41521 cgtcaaatta gcttcgtgaa atcacatttc tctcgccagc tagaggagcg tctgggtctg
    41581 attgaggtcc aggcgccgat cctgagtcgc gtaggggatg gtacgcagga taatttgtcc
    41641 ggctgtgaaa aagcggtgca ggtaaaagtg aaagcgttgc ctgacgccca gttcgaagtg
    41701 gtgcattcac tggcgaagtg gaaacgtcaa accctggggc aacatgactt cagcgcgggc
    41761 gaagggctgt acacgcacat gaaagccctt cgccccgatg aagaccgact ctctccgctc
    41821 cactcggtct atgtggatca gtgggactgg gagcgtgtca tgggcgatgg cgagcgccaa
    41881 ttttccaccc tgaaaagcac agtagaggct atatgggcag gcattaaggc gacggaagcg
    41941 gaagtgcata aacagtttgg tctggcgccg ttcctgccgg atcagatcca ttttgttcac
    42001 agtcaggaac tgctggcgcg tttcccggat ctggatgcga aagggcgcga acgcgcgatc
    42061 gccaaagaac ttggcgccgt tttcctggtg gggatcggcg gtaaactgag cgatggccgc
    42121 cgccatgatg tacgcgcgcc ggattatgat gactggagct ccgcatctga gctgggctac
    42181 gctggtctga acggcgatat cctagtgtgg aacccggtgc tggaagatgc gtttgagctt
    42241 tcctctatgg gtatccgcgt agatgccgat acgctgatgc gtcagctggc gttgaccggt
    42301 gatgaagatc gcctgcaact ggagtggcat caggcgctgc tgcgcggcga aatgccgcag
    42361 accatcggcg gcgggattgg gcagtcgcgt ctgacgatgt tgctgctgca attgccgcat
    42421 attggtcagg tgcagtgcgg cgtatggccc gcgcaggttc gcgaaagcat tcctgctatt
    42481 ttataagccg ttagcgtcgc cagcgtctca gcaggcggct tcgcatcccg gtgtcaaagc
    42541 gccagatatg atcgaaaatg cgcatgatgc cgggtttgcc gtgcgccgac atcgccaccg
    42601 catggaatcg atgctggtga agacgctgca actctcccac tttgctcacc acgtcatccg
    42661 gcaagcgctg ggcgataaaa tccgaaatga ccaccgcatc ggcatcaaac cattcccgtc
    42721 cctgcattct ttcaataatg gcgcgaaaac agctggcgat atccgtgccg ccgcgaaaac
    42781 gttgacttaa aaagcggatg gcctgctcaa tactttccgg gccggagagt tcataacgca
    42841 caacgtcagt ggaaaacagc ataataaagc agcggcggtt atccgccagc gcaacgcgca
    42901 tcaacgccag gcagaacgct tttgcgcact gctcgttaaa tcctcccatc gagcctgaag
    42961 tatcgacgca gacaataaac ggtccgcgcg gctgctcgtc gacatcctgg tgtactaccg
    43021 gccgttcggt cactttctca cgccacgctt cgccatgcag gcgataggtg aggagctgtt
    43081 tttccactaa ccggcggtaa aattcatatt ccagctcggt gatgccgagc gtcgccagct
    43141 ctggcggcaa caggcgcaga atatcatcgc cttgctgaat accgtcaacc tgctccggca
    43201 ccgttgcggg ttcgcgtacc agtgtacgaa aggtttccat cggcgcgtct tttttcggta
    43261 ccgatttggc ttcccgcgaa cgtcccagtt gttccgccag ttgcattagc tccggctggg
    43321 cggcgagaaa ttcgccgtat tttacgatca gttgataatc accacgttta agctggcccg
    43381 cgctcatatc ccacaggcgg cctgcggcat tatcattttc cgccaacgtc ggttccagtt
    43441 gcccgctcag cgtcatccgt tcctgtacgt cactcagcaa ctgctcgcgc tcttcttcca
    43501 gtagttgctg gtttaacgtg gtggcctgca cgaccagact taaccgccag cgttgcaaaa
    43561 aaagcgtgtg tagcgcaggg gtaaaggtac tgttgctctc cgtcaactgc ttcgcctgcg
    43621 cggcatacgg tgaatgcagg cgatgaagca acgccagtat ttgcggcagt tgcacgatga
    43681 actgtggggt agagagaagt tggctttgct gataacacat gacctcttcc gtgagttccg
    43741 gcggaacgcg tgcgtcttta agacggctgc gtagcgcttc ccgccagcgc gggagatcgg
    43801 cggtcacggc gttttttaaa cgtggaaact tttcaaagaa aatgaccagc tgtggggaag
    43861 ccagtagcgc gaggatcatc tcttcgacca ttccctcttc gctgacggcc agcatggtat
    43921 ttagcgtatc cagcgtcagc attgttgcgc ctggcggatc tgttctccta catcctgcag
    43981 gctggcctca atgcgcccta accagtcgct gtgaataaac aggcaatgtt gctgctcgct
    44041 gaagcgggta tgctgctggc gccagtcgtt ttctaacgtt tccagctgct gtttgatctc
    44101 cgcaggcata ctgtcttcag ccgctcccgg taacgccaga cgggtacctt gtagactgat
    44161 gtcgcgcacc accggatgtt gagcgttatc gacttccata ttcagcgttt gggcaaagcc
    44221 gatcccgttc agtttgccgc ggatctcgcc gcctttggtc agccaaagtt ccagcgcgct
    44281 gcggtcaaag gtaatatgga tcacttccat atcatgcagt tttagcggtt tttgtagcaa
    44341 taacgtcaac gttgacgcac tggcttccgg cggtaaagtg taatgcgggc gacggctgaa
    44401 cataccgcct tctttaatga cggtgaaggc ggttttatcg ctttgctgtt gctgcaactg
    44461 gaggcggcgc tggacgatac cgccgaggcg agtcagcatg gcctgctgct gccaggcgtg
    44521 tccggtcatc aatatttcca gttgctgttg catgagattc agactctgcg cgtcatacca
    44581 caagcaatct tttagcagga taaggtcaat cggcgcaacc gcgtcgcgtc cgctaaagaa
    44641 ggcgctggcc tgtaacaggc ggatggcttt cttccagcga cggtcggaga cataaggcgc
    44701 attcggcaaa ttatccagct gttggcgcag agtaaatatc agctcaaaga ccggatcagg
    44761 cagtgaaatc gcgccgatat ctttttgcca ctgttgatat tcttcgtcgc taacctgtaa
    44821 cgaggcgggg accgggttat cactctcatc ctgctgacta accagcatgg agcggaaatt
    44881 ggctttatcc tgaactttat ccagccacag gcgaatcaac attcggtcgt acaaggcttc
    44941 caggctgctg tccgcttcgg gcagttcgtt agaggccgcc accagtagcc gcatcgggat
    45001 tttttcctca aacgcgccgt tgcggaaatg gcgttcgtta atggcggtca gcaatgtgtt
    45061 caggatagcg ggcccggctt tccagatttc atccagaaaa acgatttcgg cttcgggaag
    45121 gtagccggtc gttaagcgtt catagcgacc ttcatctttc agcgcctgaa tagagagcgg
    45181 gccaaacacc tcttccggcg tggaaaagcg tgtcatcaga tattcaaaag cgcgggcgcg
    45241 ctggaaagca aacttcaggc ggcgggcaat cagactcttg gcgataccgg gcgggcccaa
    45301 caaaaagacg ctctcaccgc ttaacgccgc cagtaggcac aggcgtatgg cgtgactacg
    45361 ttcatacagc cccttctcaa gggcgctgct cagacgggaa attctttccg ctaataaatg
    45421 tgggtgagcc ataataaaga ggcgtccttt cgacaaatgg atcatgctaa ttgcgagtat
    45481 agacgtttca ccaccggggc tgtaatcttc tgacgcgctg tttatttttc tttgagccag
    45541 gttaatctgg cttcatttag gggtacgatt ttatgattaa tcgtgcatac tgtgcgcttt
    45601 tttgtgggcc aagggactaa gcacacattt catatctata cactcattca ttcaaactac
    45661 atcaaggcgg caaaggagtg aatcccctgg cactgactta aacgtgtgac tggggtaagc
    45721 gaatgcagtc gacaaggagg tagcgtgagg ggtgacgtgt ataaacgaaa gatgagtcta
    45781 tgagcactga taataagcaa tcgttgcctg cgattaccct cgcagctatt ggggttgtct
    45841 acggtgatat tggtaccagc ccgctttata cgcttcgtga atgtttgtcc ggtcagtttg
    45901 gttttggcgt tgaacgagat gccgtgtttg gttttctgtc gctgatcttc tggctactca
    45961 tctttgtggt ttccatcaaa tatctcacct tcgtgatgcg cgccgataac gcgggtgaag
    46021 gtggaatttt gacgctgatg tcgcttgccg ggcgtaatac ctcggcgcgc accacatcca
    46081 tgttagttat catgggactg ataggcggca gctttttcta tggcgaagtg gtcattacgc
    46141 cggcgatttc ggtgatgtcg gcgattgaag gcctggagat tgtcgcgccg cagctggata
    46201 cctggattgt cccgctctcc attattgtgc tgactctgtt gtttatgatt cagaagcacg
    46261 gtacgggaat ggtaggaaaa ctctttgcgc cgatcatgct gacctggttt ttaatcctgg
    46321 cggtacttgg cctacgcagt attatcgcca atcccgaagt gttacatgcg ctgaatcctg
    46381 tctgggcggt acgttttttc cttgaatata aaaccgtatc gtttattgcg ttgggcgcgg
    46441 tggtgctgtc gattaccggc gtagaggcgt tgtacgccga tatgggacac ttcggtaagt
    46501 tcccgattcg cctggcgtgg tttaccgtgg tattgccgtc gttagtactg aactactttg
    46561 gtcagggtgc attgctacta aagcatccgg aagcgattaa aaaccccttc ttcctgttgg
    46621 cgccggactg ggcgttaatt ccgctgctga ttctggccgc gctggcgacg gtgatcgcct
    46681 cccaggcggt aatttccggc gtcttttcgc tgacgcgtca ggccgtgcgt cttggctatt
    46741 tgtcgccaat gcgcattatc catacctccg agatggagtc cggtcagatc tacatccctt
    46801 tcgttaactg gctgctttat ttcgcggtcg tggttgttat tgttagcttt gagcactcca
    46861 gcaacctggc ggcggcctat ggcatcgccg tgaccggcac gatggtgctg acgtctattc
    46921 tttctacgac cgtggcgcgt aagaactggc actggaacaa atattttgtc gcgctgatcc
    46981 tcatcgcatt cctgtgcgtg gatatcccgc tgttctcggc taacctcgac aaattgttgt
    47041 ccggcggttg gctgccgctg agcctgggtc tgatcatgtt cacgatcatg accacctgga
    47101 agagcgagcg tttccgtctg ttgcgtcgta tgcatgaaca cggtaattcg ctggaagcga
    47161 tgattgcttc actggagaag tcaccgccgg ttcgggtgcc gggtactgcc gtatacatgt
    47221 cgcgcgcgct cagtgtgatc ccttttgctt tattgcataa cctgaagcac aacaaagtgt
    47281 tgcatgagcg cgtaatctta ctgacgttgc gtacggaaga tgcgccttat gtgcataacg
    47341 ttcgccgggt gcagattgag cagttgtctc cgacattctg gcgcgtggtg gccagctacg
    47401 gctggcgcga aacgctaaac gttgaagagg tgttccaccg ctgcggtctg gaaggcctta
    47461 gctgtcggat gatggaaacg tcgttcttta tgtcgcacga gtcgttgatt gtcggcaaac
    47521 gcccgtggta tttgcgtctg cgcggcaagc tgtatttgtt gttgcaacgc aacgccctgc
    47581 gcgcgccgga tcagttcgag atcccgccta accgcgtgat tgagttaggt acgcaggtcg
    47641 agatttaacc tctcatcaac atgccggggg ccgcattggc ttacccggcc tggccaatcc
    47701 gtagattccc acaagataat cgccattggg cgattatctt cacctgattt ccgctagcga
    47761 aacgtttcga cggcgatcac aattctgtta cgtcatgatg gttttatgaa cacatccagg
    47821 gttacactgc ggccagcgaa acgtttcgct agtggagcag aaaaatgaag aaaggcaccg
    47881 tactcaactc tgaaatctcg tcggtcattt cccgtctggg gcatactgat actctggtgg
    47941 tctgtgatgc gggtttaccc atcccgaata gcactgcgcg tatcgatatg gcactaaccc
    48001 agggcgtacc ttcttttatg caggtggtgg atgtcgtgac ctgggaaatg caggttgagg
    48061 cggcgattct tgcaacggaa atcaaacaac agaatccgca gctccacgaa acgttgctca
    48121 ctcaccttga gcaactgcag caacaccagg gaaacaccat aaaaattagt tatacgacac
    48181 acgaacaatt caaaaaattg actgcagaca gtcaggcagt gattcgcagc ggggagtgtt
    48241 ccccgtatgc gaacgtcatt atttgcgctg gcgtcacttt ctgaggccgc tatggacgca
    48301 ttactgcaac tcaaagggat cgataaagcg ttccccggcg tgaaggctct ctccggcgcc
    48361 gcgttaaacg tttatcctgg ccgcgttatg gcgctggtgg gggaaaacgg cgccggaaaa
    48421 tccaccatga tgaaagtatt aaccggcatc tatacgcgag atgcgggatc gttgttatgg
    48481 ctgggtaaag agaccacctt taatgggcct aaatcgtctc aggaagccgg gatcggcatt
    48541 attcatcagg aactgaacct gattccgcag ttgaccattg cggaaaacat cttcctgggc
    48601 cgtgagtttg tgaatcgctt tggtaaaatc gactggaaaa agatgtatgc cgaagccgac
    48661 cacctcttag ccaaactcaa tctgcgcttt aagagcgata agctggtggg cgaactctct
    48721 atcggcgatc agcaaatggt ggaaatcgcc aaagtgctga gcttcgaatc caaagtcatc
    48781 attatggatg aaccgaccga tgcgctgacc gacactgaaa ccgactctct gttccgcgtt
    48841 atccgcgaat taaaatcgca ggggcgcggc attgtctata tctctcaccg tatgaaagag
    48901 attttcgaaa tttgcgatga cgtgacggtc ttccgcgatg ggcaatttat cgccgagcgt
    48961 gaagtggcca cgttgaccga agattctctt atcgaaatga tggtgggacg taagctggaa
    49021 gatcagtacc cgcatctgga taacgcgccg ggtgagattc gcctgaaggt cgataatctg
    49081 tgcggaccgg gcgtgaacga tgtctctttt gtgctgcgaa aaggcgagat tcttggcatc
    49141 tccggcctga tgggcaccgg tcgcactgag ctgatgaaag tattgtacgg cgcgatgccg
    49201 cgaaccagcg gttacgtgac gctcgaggga cacgaagtgg tgacgcgttc tccgcaggac
    49261 gggctggcca atggcatcgt ttatatctct gaagaccgta agcgcgatgg actggtgctc
    49321 ggcatgtcag ttaaagagaa tatgtcgctg actgcgctgg attatttcag tcgcgctggc
    49381 ggaagcctga aacacaaaga tgagcagcag gcggtggggg attttatccg tctgttcaac
    49441 gtcaagacgc cgtcaatgga acaggcgata ggcctgcttt ctggcggtaa tcagcaaaaa
    49501 gtggcgattg cccgcgggtt gatgacgcgc ccgaaagtgc tcattctcga cgagccgacc
    49561 cgcggcgtgg acgtcggcgc caagaaagag atttaccagc ttatcaacca gtttaaggcc
    49621 gacggcctga gcatcattct ggtctcatct gagatgccag aagtattagg catgagcgat
    49681 cgcatcatcg tcatgcatga agggcatctc agcggtgaat ttactcgcga gcaggccacc
    49741 caggaagtgt taatggctgc cgcagtgggc aagcttaatc gcgtgaatca ggagtaaaaa
    49801 agatgacaac ccaggctgtt tctggtcgcc gttatttcac taaagcgtgg cttcttgagc
    49861 agaagtcgct cattgccctg ctggtgttga tcgcgattgt ttcgacgttg agccccaact
    49921 tttttaccgt taataatctg ttcaatattc ttcaacagac ctccgtcaac gccattatgg
    49981 cggtggggat gacgttggtg attctgacat cggggatcga tctgtccgtc ggttccctgc
    50041 tggcactcac cggtgcggtt gccgcttcaa tcgtcggcg
//
LOCUS       DAGWFR010000013        48294 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.013, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000013 DAGWFR010000000
VERSION     DAGWFR010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 48294)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 48294)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..48294
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.013"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..669
                     /locus_tag="MOX77_000870"
     CDS             <1..669
                     /locus_tag="MOX77_000870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SelA-like pyridoxal phosphate-dependent enzyme"
                     /protein_id="HCA3356494.1"
                     /translation="RTAAILYIKSHHCVQKSMLSVEQAAVVARTHNLPLIVDTAAEED
                     LQCYYRVGADLVIYSGAKAIEGPTSGLVIGKTQYVEWVKRQSAGIGRAMKVGKEGIVG
                     LTCAIELYLRAQKESGAEMVEKMAPFIDTLNTFNGVSARVVWDSAGRDIARTEIKFDE
                     AVTGIATGDLVDALKQGEYAIYFRGYKANEGIIEADVRSVDRAQLAIVARRIGEVINQ
                     EKQA"
     gene            666..1406
                     /locus_tag="MOX77_000871"
     CDS             666..1406
                     /locus_tag="MOX77_000871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463308.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KDGP aldolase family protein"
                     /protein_id="HCA3356495.1"
                     /translation="MKLTPNFYRDRVCLNVLAGSKDNAREIYAAAEGHVLVGVLSKNY
                     PDVASAVADMREYAALIDNALSVGLGAGDPNQSAMVSEISRQVQPQHVNQVFTGVGGS
                     RALLGQNETVVNGLVSPTGTPGLVKISTGPLSSRAPDGIVPIETAIALLKDMGGSSVK
                     YFPMGGLTCRDEYKAVADACARHDFWLEPTGGIDLENFAEILHIALDAGVSKIIPHIY
                     SSIIDKVSGNTRADDVRQLLAIVRSRVG"
     gene            1423..3336
                     /locus_tag="MOX77_000872"
     CDS             1423..3336
                     /locus_tag="MOX77_000872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BglG family transcription antiterminator"
                     /protein_id="HCA3356496.1"
                     /translation="MRFPNQRLAQLFAMLQNETLPQDELAQRLSVSTRTVRADIAALN
                     MLLTPHGAQFTLSRGNGYQLKIDDPARYQSLQTQQSPTLARGPRTSQERIHYLLARFL
                     TSAFSLKLEDLADEWFVSRATLQNDMADVREHLLRYHLTLETRPRHGMKLFGGEMAIR
                     ACLTDLLWTLVQQEPSHPLIVSTTLNTEVSQRLQSLLPDIFSHCQIRLTDEGELFLRL
                     YCAVAVRRIREGYPLSECVAEEVDEKVRHAAHEIAELLQQLADKPLSEPEVSWLKVHI
                     AARQVQEIAPSAINADDEEALVHYILNFINTQYNYNLLNDKQLHADLLTHIKTMITRV
                     RYQIMIPNPLLENIKQHYPMAWDMTLAAISSWGKYTPYTISENEIGFLVLHIGVGLER
                     SYNIGYQRQPQVLLVCDAGNAMVRMIEAVLARKYPQIEIARTLTLRDYEARDSMVEDF
                     VISTARIGEKDKPVIMIAPFPTDYQLEQIGKLVLVDRTRPWMLDKYFDASHFRIVEGE
                     INQQTLFKTLCDQLHEEGFVDAAFLDSVIEREAIVSTLLGDGIALPHALGLLAKKTVV
                     YTVLAPQGIAWGDETAHVIFLLAISKSEYEEAMAIYDIFVTFLRERAMTRLCACQNFT
                     QFKTVAMECVSRF"
     gene            3414..3656
                     /locus_tag="MOX77_000873"
     CDS             3414..3656
                     /locus_tag="MOX77_000873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelB/DinJ family
                     antitoxin"
                     /protein_id="HCA3356497.1"
                     /translation="MATLNVRLDDKLKNEAYAVLEKLNITPTEAVRLLFQYVAETGRM
                     PVKTVTLSDSEDALIQTVRERLSSPQKGIKVSLDDL"
     gene            3646..3930
                     /locus_tag="MOX77_000874"
     CDS             3646..3930
                     /locus_tag="MOX77_000874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HCA3356498.1"
                     /translation="MTYELEFDPRALKEWHKLGDTVKAQLKKKLADVLLNPRIDSARL
                     NGLPDCYKIKLKSSGYRLVYQVRDDVVIVFVVAVGKREHSAVYHDANKRL"
     gene            complement(3934..4398)
                     /gene="nrdG"
                     /locus_tag="MOX77_000875"
     CDS             complement(3934..4398)
                     /gene="nrdG"
                     /locus_tag="MOX77_000875"
                     /EC_number="1.97.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate
                     reductase-activating protein"
                     /protein_id="HCA3356499.1"
                     /translation="MRYHQYYPVDIVNGPGTRCTLFVSGCVHECPGCYNKSTWRLNSG
                     QPFTKEMEDKIIADLNDTRIHRQGISLSGGDPLHPQNVPDILALVQRIHAECPGKDIW
                     VWTGYRLDELNAAQMQVVNLINVLVDGKFVQDLKDPALIWRGSSNQVVHHLR"
     gene            complement(4519..6657)
                     /gene="nrdD"
                     /locus_tag="MOX77_000876"
     CDS             complement(4519..6657)
                     /gene="nrdD"
                     /locus_tag="MOX77_000876"
                     /EC_number="1.17.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate reductase"
                     /protein_id="HCA3356500.1"
                     /translation="MTPHVMKRDGCKVPFKSERIKEAILRAAKAAGVDDADYCATVAE
                     VVSSQMNARSQVDINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIQREKRGRLNQEI
                     RGLVEQTNSALLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIH
                     YHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASH
                     IYGGTTINRIDEVLAPFVTESYNKHRKTADEWQIPDAEGYARSRTEKECYDAFQSLEY
                     EVNTLHTANGQTPFVTFGFGLGTSWESRLIQASILRNRIAGLGKNRKTAVFPKLVFAI
                     RDGLNHKFGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWE
                     NENGEQIHDGRNNLGVISLNLPRIALEAKGDETAFWKLLDERLALARKALMTRIARLE
                     GVKARVAPILYMEGACGVRLKADDDVSEIFKNGRASISLGYIGIHETINALFGGEHLY
                     DSEQLRAKGIAIVERLRQAVDQWKDETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPG
                     VTDKGYYTNSFHLDVEKKVNPYDKISFEAPYPPLANGGFICYGEYPNIQHNLKALEDV
                     WDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDAARVSVTRRVCGY
                     LGSPDARPFNAGKQEEVKRRVKHLGNGQIG"
     gene            complement(7066..8718)
                     /gene="treC"
                     /locus_tag="MOX77_000877"
     CDS             complement(7066..8718)
                     /gene="treC"
                     /locus_tag="MOX77_000877"
                     /EC_number="3.2.1.93"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha,alpha-phosphotrehalase"
                     /protein_id="HCA3356501.1"
                     /translation="MTIPLWWQNGVIYQIYPKSFQDTTGSGTGDLRGVTQRLDYLQRL
                     GVDAIWLTPFYISPQVDNGYDVANYTAIDPTYGTLDDFDELVAQAKARGIRIILDMVF
                     NHTSTQHAWFREALNKESPYRQFYIWRDGTPDVCPNNWQSKFGGSAWRWHSQSEQYYL
                     HLFAPEQADLNWENPAVRAELKKVCEFWADRGVDGLRLDVVNLIAKDQDFPDDPTGDG
                     RRFYTDGPRTHTFLREMNRDVFTPRNLMTVGEMSSTTLENCQQYAALSGDELSMTFNF
                     HHLKVDYPNGEKWTLAKPDYVALKALFRQWQQGMHNVAWNALFWCNHDQPRIVSRFGD
                     EGEYRVPAAKMLAMALHGMQGTPYIYQGEEIGMTNPHFTRITDYRDVESHNMFAALRA
                     AGRDPDELLAILASKSRDNSRTPMQWDNGKNAGFTQGEPWISLCDNYTEVNVAAALRD
                     ENSVFYTYQKLIALRKTQPVMIWGDYQDLLPGSPSVWCYRRQWQGQTLLVVANLSDQC
                     QEWHPPHIKGQWQALLHNYGEVASQPAAMTLRPFEAIWWLQR"
     gene            complement(8768..10186)
                     /gene="treB"
                     /locus_tag="MOX77_000878"
     CDS             complement(8768..10186)
                     /gene="treB"
                     /locus_tag="MOX77_000878"
                     /EC_number="2.7.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005224799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS trehalose transporter subunit IIBC"
                     /protein_id="HCA3356502.1"
                     /translation="MSKVKQADIDRLIDLVGGRDNIATVSHCITRLRFVLHQPANARP
                     KEIEQLPMVKGCFTNAGQFQVVIGTEVGDYYNALLETTGKAYADKEQAKKAARQNMKW
                     HEQLISHFAEIFFPLLPALISGGLILGFRNVIGDVPMSHGQTLAQMHPALKTLYDFLW
                     LIGEAIFFYLPVGICWSAVKKMGGTPILGIVLGVTLVSPQLMNAYLLGQQTPDVWNFG
                     VFSIEKIGYQAQVIPALLAGLALGFIETRLKRIVPDYLYLVVVPVCSLILAVFLAHAF
                     IGPFGRMIGDGVAFAVRYLMTGSFAPIGAALFGFLYAPLVITGVHQTTLAIDMQMVQS
                     MGGTPVWPLIALSNIAQASAVVGIIISSRKHNEREISVPAAISAYLGVAEPAMYSINI
                     KYRFPMLCAMIGSGLAGLLCGLNGVMANGIGVGGLPGILSIQPTYWQVFAMAMVIAIV
                     IPVILTTFIYQRKHRQGTLQIV"
     gene            complement(10324..11271)
                     /gene="treR"
                     /locus_tag="MOX77_000879"
     CDS             complement(10324..11271)
                     /gene="treR"
                     /locus_tag="MOX77_000879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator TreR"
                     /protein_id="HCA3356503.1"
                     /translation="MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSKRTRERVEAVMN
                     QHGFSPSRSARAMRGQSDKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQF
                     SPMLVMEHLGMLRRRNIDGVVLFGFTGITEELIAPWKASLVLLARDAQGFASVCYDDE
                     GAIHILMQRLYEQGHRNISFLGVPHSDITTGKRRHDAYLAFCKKHKLHPVAALPGLAM
                     KQGYEHTASVIMPDTTALVCATDTLALGASKYLQEQRIETLQLASIGNTPLIKFLHPE
                     IVTVDPGYAEAGRQAALQLIEQINGRCDPRRIVIPSTLA"
     gene            11416..11514
                     /gene="mgtL"
                     /locus_tag="MOX77_000880"
     CDS             11416..11514
                     /gene="mgtL"
                     /locus_tag="MOX77_000880"
                     /inference="COORDINATES: protein motif:HMM:NF028369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mgtA regulatory leader peptide MgtL"
                     /protein_id="HCA3356504.1"
                     /translation="MRIIRGANYLLTGGDMDPEPTPLPRWRIFLFR"
     gene            11655..14363
                     /gene="mgtA"
                     /locus_tag="MOX77_000881"
     CDS             11655..14363
                     /gene="mgtA"
                     /locus_tag="MOX77_000881"
                     /EC_number="7.2.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium-translocating P-type ATPase"
                     /protein_id="HCA3356505.1"
                     /translation="MLKTITRQLFARLNRHLPYRLVHRDPLPGAQTAVNATIPPSLSE
                     RCLKIAAMEQETLWRVFDTHPEGLNAAEVTRAREKHGENRLPAQKPSPWWVHLWVCYR
                     NPFNILLTILGGISYATEDLFAAGVIALMVGISTLLNFVQEARSTKAADALKAMVSNT
                     ATVLRVINENGENAWLELPIDQLVPGDIIKLAAGDMIPADLRIIQARDLFVAQASLTG
                     ESLPVEKVATTREPRQNNPLECDTLCFMGTNVVSGTAQAVVMATGADTWFGQLAGRVS
                     EQDNEQNAFQKGISRVSMLLIRFMLVMAPVVLIINGYTKGDWWEAALFALSVAVGLTP
                     EMLPMIVTSTLARGAVKLSKQKVIVKHLDAIQNFGAMDILCTDKTGTLTQDKIMLENH
                     TDISGKPSEHVLHCAWLNSHYQTGLKNLLDTAVLEGVDETAARQLSGRWQKIDEIPFD
                     FERRRMSVVVAEDSNVHQLVCKGALQEILNVCTQVRHNGDIVPLDDNMLRRVKRVTDT
                     LNRQGLRVVAVATKYLPAREGDYQRIDESDLILEGYIAFLDPPKETTAPALKALKASG
                     ITVKILTGDSELVAAKVCHEVGLDAGDVVIGSDIEGLSDDALAALAARTTLFARLTPM
                     HKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAREAADIILLEKSL
                     MVLEEGVIEGRRTFSNMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLL
                     YDVSQVAIPFDNVDEEQIQKPQRWNPADLGRFMVFFGPISSIFDILTFCLMWWVFHAN
                     TPETQTLFQSGWFVVGLLSQTLIVHMIRTRRLPFIQSRAAWPLMAMTLLVMVVGVSLP
                     FSPLASYLQLQALPLSYFPWLIAILAGYMTLTQLVKGFYSRRYGWQ"
     gene            complement(14479..14925)
                     /locus_tag="MOX77_000882"
     CDS             complement(14479..14925)
                     /locus_tag="MOX77_000882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HCA3356506.1"
                     /translation="MVRARFTEEQIADFLQQSKNGVPNKALCEEYGFSNSTLRRWQEK
                     HAESIRQELKQIESTAKIVFLCFIIAAILLTLMFPKPTAALAIPPYLVYCISYIRRFR
                     RISAKHIQRWDISSSRSGSGAENVFYKLSWTFLFFMPAYSILQLLE"
     gene            complement(15000..15386)
                     /gene="ridA"
                     /locus_tag="MOX77_000883"
     CDS             complement(15000..15386)
                     /gene="ridA"
                     /locus_tag="MOX77_000883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-iminobutanoate/2-iminopropanoate deaminase"
                     /protein_id="HCA3356507.1"
                     /translation="MSKTIATENAPAAIGPYVQGVDLGSMVITSGQIPVDPKTGAVAE
                     DVSAQARQSLENVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATF
                     PARSCVEVARLPKDVKIEIEAIAVRR"
     gene            complement(15463..15924)
                     /gene="pyrI"
                     /locus_tag="MOX77_000884"
     CDS             complement(15463..15924)
                     /gene="pyrI"
                     /locus_tag="MOX77_000884"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000148566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase regulatory
                     subunit"
                     /protein_id="HCA3356508.1"
                     /translation="MTHDNKLQVEAIKCGTVIDHIPAQVGFKLLSLFKLTETDQRITI
                     GLNLPSGEMGRKDLIKIENTFLTDEQVNQLALYAPQATVNRIDNYDVVGKSRPSLPER
                     INNVLVCPNSNCISHAEPVSSSFAVKKRANDIALKCKYCEKEFSHNVVLAN"
     gene            complement(15937..16872)
                     /gene="pyrB"
                     /locus_tag="MOX77_000885"
     CDS             complement(15937..16872)
                     /gene="pyrB"
                     /locus_tag="MOX77_000885"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase"
                     /protein_id="HCA3356509.1"
                     /translation="MANPLYQKHIISINDLSRDDLNLVLATAAKLKANPQPELLKHKV
                     IASCFFEASTRTRLSFETSMHRLGASVVGFSDSANTSLGKKGETLADTISVISTYVDA
                     IVMRHPQEGAARLATEFSGQVPVLNAGDGSNQHPTQTLLDLFTIQETQGRLDNLHIAM
                     VGDLKYGRTVHSLTQALAKFSGNRFYFIAPDALAMPQYILDMLDEKGMAWSLHGSIEE
                     VMADVDILYMTRVQKERLDPSEYANVKAQFVLRASDLNGARENMKVLHPLPRIDEITT
                     DVDKTPHAWYFQQAGNGIFARQALLALVLNSELSL"
     gene            complement(16908..17009)
                     /gene="pyrL"
                     /locus_tag="MOX77_000886"
     CDS             complement(16908..17009)
                     /gene="pyrL"
                     /locus_tag="MOX77_000886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyr operon leader peptide"
                     /protein_id="HCA3356510.1"
                     /translation="MVQCVRHSVLPRLKKDAGLPFFFPLKTNTKPLN"
     gene            16989..17130
                     /locus_tag="MOX77_000887"
                     /pseudo
     CDS             16989..17130
                     /locus_tag="MOX77_000887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_453732.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(17100..17588)
                     /locus_tag="MOX77_000888"
     CDS             complement(17100..17588)
                     /locus_tag="MOX77_000888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine repressor"
                     /protein_id="HCA3356511.1"
                     /translation="MKEYDDYSAKEQQQLAVCQRLISEKSYLSQEEIRRDLQNEGFEG
                     ISQSTVSRLLKLLGAIKIRNAKGQKIYSVNPQQRPSPDAGRSIAEMVVSVEHNSEFIL
                     IHTAAGYGRAVARILDYHALPEILGVVAGSSIVWVAPQVVQRTALVHKQINYLLKMNL
                     NS"
     gene            complement(17775..19178)
                     /locus_tag="MOX77_000889"
     CDS             complement(17775..19178)
                     /locus_tag="MOX77_000889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfcC family protein"
                     /protein_id="HCA3356512.1"
                     /translation="MGKFKFPTAYTILFILIALVAVMTWIVPAGKYQMAMNATLGKEV
                     PVAGTYAPVDAHPQGITAVLLAPIDGLYNHETYTAGAIDVALFVLIIGGFLGVVNKTG
                     AIDAGIERVTIKLNGKDEWMIPILMALFAAGGTIYGMAEESLPFYTLLVPVMMAARFD
                     PLVATATVLLGAGIGTLGSTINPFATVIAANAAGIPFTQGMLMRVLLLIVGYVLCVFW
                     VMRYARKVRAHPELSIVADKMAENRAHFLGNRANTLLEFTATRKWVLLIFAASFAVMI
                     YGVAVLGWWMAEISGVFLAAAIIVGVITRMGEEAFTSTFIDGARDLLGVALIIGIARG
                     IVVVMDNGMITHTILHSAESLVSGLSTTIFINVTYWLEVLLSFLVPSSSGLAVLTMPI
                     MAPLADFAHVQRDLVVTAYQSASGIVNLVTPTSAVVMGGLAIARVPYVRYLKWVAPLL
                     LILTLLNMAVLSIGAMM"
     gene            complement(19234..20238)
                     /gene="argF"
                     /locus_tag="MOX77_000890"
     CDS             complement(19234..20238)
                     /gene="argF"
                     /locus_tag="MOX77_000890"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HCA3356513.1"
                     /translation="MVISLKNRNFLKLLDYTPAEIQHLIDLAIELKAAKKAGCEKQTL
                     IGKNIALIFEKTSTRTRCAFEVAAFDQGAQVTYLGPSGSQIGHKESMKDTARVLGRMY
                     DGIEYRGFGQHIVEELGEYAGVPVWNGLTDEFHPTQILADLMTMLEHAPGKTLPELSF
                     AYLGDARNNMGNSLMVGAAKMGMDIRLIAPKSFWPDAALVAQCREIASVTGARITLTE
                     SVEDGVHGVDFLYTDVWVSMGEPKEAWAERVSLMTPYQVNQQVVNATGNPDVKFMHCL
                     PAFHNEHTKVGREIEMAYGLKGLEVTEEVFESAGSMVFDEAENRMHTIKAVMVATLGD
                     "
     gene            complement(20350..21282)
                     /gene="arcC"
                     /locus_tag="MOX77_000891"
     CDS             complement(20350..21282)
                     /gene="arcC"
                     /locus_tag="MOX77_000891"
                     /EC_number="2.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamate kinase"
                     /protein_id="HCA3356514.1"
                     /translation="MENKRTLVVALGGNALLKRGEPLEADIQRKNIELAARTIAQLTR
                     QWRVVLVHGNGPQIGLLALQNSAYANVTPYPLDILGAESQGMIGYMLQQALKNHLPER
                     EISVLLTQVEVDANDPAFLNPTKYIGPIYDEAQARALQAEKGWVFKADGNAFRRVVPS
                     SQPKRIVENDAIRALISRDHLVICNGGGGVPVVEKADGYHGIEAVIDKDLSAALLASQ
                     IHADALLILTDVDAVYLDWGKPTQRPLAQVTPELLREMQFDAGSMGPKVTACAEFVSH
                     CCGIAGIGSLADGQAILAGEKGTLIRCETADVDA"
     gene            complement(21293..22513)
                     /gene="arcA"
                     /locus_tag="MOX77_000892"
     CDS             complement(21293..22513)
                     /gene="arcA"
                     /locus_tag="MOX77_000892"
                     /EC_number="3.5.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine deiminase"
                     /protein_id="HCA3356515.1"
                     /translation="MEKHFVGSEIGQLRSVMLHRPNLSLKRLTPSNCQELLFDDVLSV
                     ERAGEEHDIFANTLRQQGIEVLLLTDLLTQTLDVADAKAWLLDTQISDYRLGPTFAAD
                     IRAWLADMPHRELARHLSGGLTYGEIPASIKNMVVDTHDINDFIMKPLPNHLFTRDTS
                     CWIYNGVSINPMAKPARQRETNNLRAIYRWHPQFADGDFIKYFGDENINYDHATLEGG
                     DVLVIGRGAVLIGMSERTTPQGVEFLVQALFKHRQAERVIAVELPKHRSCMHLDTVMT
                     HIDIDTFSVYPEVVRPDVQCWTLTPDGRGGLKRTQESTLVHALETALGIDQVRLITTG
                     GDAFEAEREQWNDANNVLTLRPGVVVGYERNIWTNEKYDKAGITVLPIPGDELGRGRG
                     GARCMSCPLERDGI"
     gene            23188..23640
                     /locus_tag="MOX77_000893"
     CDS             23188..23640
                     /locus_tag="MOX77_000893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhcH/YjgK/YiaL family protein"
                     /protein_id="HCA3356516.1"
                     /translation="MIVGNIEHLEAWLPTALRQAIEHVNAHVTATTAPGKYDIDGDRL
                     FYMISENMTEPGESRSAEYHARYLDIQIVLQGQEGMAFSTRPAGTPHTDWLADKDIAF
                     LPTSVDEKTVVLNEGDFVVFYPGEVHKPLCAVGEPARVRKAVVKMLMA"
     gene            complement(23714..24718)
                     /gene="argF"
                     /locus_tag="MOX77_000894"
     CDS             complement(23714..24718)
                     /gene="argF"
                     /locus_tag="MOX77_000894"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HCA3356517.1"
                     /translation="MSTFYQKPFLKLLDFTASELTALLQLAAKLKADKKNGKEEQKLV
                     GKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGSSGSQIGHKESIKDTARVLGRMFD
                     GIQYRGYGQEIVETLAEYSGVPVWNGLTDEYHPTQLLADLLTMQEHLPGKAFNEMTLV
                     YAGDARNNMGNSMLEAAALTGLDLRLVAPKACWPQAALVAECSAMAKKNGGAITLTED
                     IASGVKGADFIYTDVWVSMGEPKEKWAERIALLRDYQVNSQMMALTGNPQVKFLHCLP
                     AFHDDETTLGKKMAEEYGLHGGMEVTDEVFESAASIAFDEAENRMHTIKAVMVATLSK
                     "
     gene            24884..25300
                     /gene="rraB"
                     /locus_tag="MOX77_000895"
     CDS             24884..25300
                     /gene="rraB"
                     /locus_tag="MOX77_000895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E inhibitor RraB"
                     /protein_id="HCA3356518.1"
                     /translation="MANPELLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDFE
                     TLEKAAVEAFKLGYEVTEPEELEVEEGDTVICCDILSECALNAELIDAQVEQLMNLAE
                     KYDVEYDGWGTYFEDPNGEEGDDDDYVDEDDDGVRH"
     gene            25359..26123
                     /gene="miaE"
                     /locus_tag="MOX77_000896"
     CDS             25359..26123
                     /gene="miaE"
                     /locus_tag="MOX77_000896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001109010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase
                     MiaE"
                     /protein_id="HCA3356519.1"
                     /translation="MNYPQILSPVLNFLHCPTPQAWIVQARDPQNLPLLLTDHLICEL
                     KAAQTALLLVRKYVADKSGADALLAWLQPYEAFAFRQGPEPDFVALHKQISKSAMPQT
                     DDPWGRQLIDRMVLLIKEELHHFWQVREVMQARNIPYVKITASRYAKGMLKAVRTHEP
                     LTLIDKLICGAYIEARSCERFAALAPWLDEDLQTFYLSLLRSEARHYQDYLALAQQIS
                     AEDISARVRYFGDVEADLILSPDREFRFHSGVPAAG"
     gene            complement(26368..26856)
                     /locus_tag="MOX77_000897"
     CDS             complement(26368..26856)
                     /locus_tag="MOX77_000897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3617 domain-containing protein"
                     /protein_id="HCA3356520.1"
                     /translation="MKRLLSAIVFPAMFISISNVYALDIQPGEWKMENIEMRTINPDT
                     KEVLMDEKNSGIATLMCYTPKMSEDSKKMVKGFSTSAGGCTTTFVESTDTKLINETVC
                     NNPDVKSHSIVETTKISDTEFAMTMKSDVDAGGNKTTSINKIKQTFVGKTCSEASKGV
                     KQ"
     gene            complement(26963..27466)
                     /locus_tag="MOX77_000898"
     CDS             complement(26963..27466)
                     /locus_tag="MOX77_000898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HCA3356521.1"
                     /translation="MNNVASPTLTVHRITTADNAAIARVIRQVSAEYGLTADKGYTVA
                     DPNLDELYQVYSQPGAAYWVVEQNGCVVGGGGVAPLSCSEPDICELQKMYFLPVIRGQ
                     GLAKKLALMALDHAREQGFKRCYLETTAFLREAIALYERLGFEHISEPLGCTGHVDCE
                     VRMLKDL"
     gene            27661..28848
                     /locus_tag="MOX77_000899"
     CDS             27661..28848
                     /locus_tag="MOX77_000899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF898 domain-containing protein"
                     /protein_id="HCA3356522.1"
                     /translation="MNNVISSKDNHNHTLVFTGKGGKYFVICLVNFLLTCITFGIYAP
                     WAMVKCRRYIYTNMTLNNQPFAYKATGGALFISVLLVFIIYIVSLSFIEHGHPGLGFT
                     LFGLLIAIIPFMAVKGLQYQAMMTSLNGVHFGFQCSMRRAWWYMFALPVLLMVALYIV
                     LYIISLVTIAVGGLVFNIVFLGLLAIIGIGVINGITYSKWMTLFGNGANFGIHRFSIQ
                     VNVKTCIRGCVLAMLTLFPFAVVIGYLIAPVFTDMILLSMMGNAQAGGALILQYYGQI
                     MACYFLYFLAIIVVTSYLYVALRNLFLNNLSLANDSIRFHSSVTAHGMLWRLLVVFVI
                     SGVTLGLAYPWLKIWLVSWLAQNTQVQGDLDSLELTNDEKPLENSPLMWISRGIMPYF
                     PFI"
     gene            complement(28990..31845)
                     /locus_tag="MOX77_000900"
     CDS             complement(28990..31845)
                     /locus_tag="MOX77_000900"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000416368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HCA3356523.1"
                     /translation="MEKTYNPQDIEQPLYEHWEKQGYFKPNGDESKESFCIMIPPPNV
                     TGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTR
                     HDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERFTMDEGLSNAVKEVFVRL
                     YKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPLADGAKTADGKDYLV
                     VATTRPETVLGDTGVAVNPEDPRYKDLIGKFVILPLVNRRIPIVGDEHADMEKGTGCV
                     KITPAHDFNDYEVGKRHALPMINILTFDGDIRESAEVFDTKGEESNVYSSEIPAEFQK
                     LERFAARKAIVAAVDALGLLEEIKPHDLTVPYGDRGGVVIEPMLTDQWYVRADVLAKP
                     AVEAVENGDIQFVPKQYENMYFSWMRDIQDWCISRQLWWGHRIPAWYDNDGNVYVGRT
                     EDEVRQENNLGADVQLRQDEDVLDTWFSSALWTFSTLGWPENTDALRQFHPTSVMVSG
                     FDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVIDPL
                     DMVDGISLPELLEKRTGNMMQPQMAEKIRKRTEKQFPNGIEPHGTDALRFTLAALAST
                     GRDINWDMKRLEGYRNFCNKLWNASRFVLMNTEEQDCGFNGGEMTLSLADRWILAEFN
                     QTVKAYREALDNFRFDIAAGILYEFTWNQFCDWYLELTKPVMTGGSESELRGTRHTLV
                     TVLEGLLRLAHPIIPFITETIWQRVKVICGITADTIMLQPFPEYNAAQVDEAALADTE
                     WLKQAIVAVRNIRAEMNIAPGKPLELLLRGCSEEAVRRVNDNRSFLLNLARLESITVL
                     PADDKGPVSMTKIIDGAELLIPMAGLINKEDELARLAKEVAKIEGEIARIEGKLSNEG
                     FVARAPEAVIAKEREKLDGYAEAKAKLIEQQAVISAL"
     gene            complement(31845..32288)
                     /gene="holC"
                     /locus_tag="MOX77_000901"
     CDS             complement(31845..32288)
                     /gene="holC"
                     /locus_tag="MOX77_000901"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004098129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit chi"
                     /protein_id="HCA3356524.1"
                     /translation="MKNATFYLLDNDTTVNGLSAVEQLVCEIAAERWRAGKRVLIACE
                     DEKQAIRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAWPQKRNSSPRDILISLRTS
                     FADFATAFTEVVDFVPYEETLKQLARERYKAYRVAGFNLNTATWK"
     gene            complement(32425..33936)
                     /gene="pepA"
                     /locus_tag="MOX77_000902"
     CDS             complement(32425..33936)
                     /gene="pepA"
                     /locus_tag="MOX77_000902"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HCA3356525.1"
                     /translation="MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYIS
                     ALLRRGELEGKPGQTLLLHHVPNVLSERILLIGCGKERELDERQYKQVIQKTINTLND
                     TGSMEAVCFLTELHVKGRNNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLRKMVFN
                     VPTRRELTSGERAIQHGLAIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNV
                     ITRVIGEQQMRELGMNAYLAVGHGSQNESLMSVIEYKGNPSEDARPIVLVGKGLTFDS
                     GGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELKLPINVIGVLAGCENMPGGRAYRP
                     GDVLTTMSDQTVEVLNTDAEGRLVLCDVLTYVERFEPEAVIDVATLTGACVIALGHHI
                     TGLMSNHNPLAHELIGASEQAGDRAWRLPLGDEFQEQLESNFADMANIGGRPGGAITA
                     GCFLSRFTRKYNWAHLDIAGTAWRSGKAKGATGRPVALLSQFLLNRAGFNGEE"
     gene            34331..35431
                     /gene="lptF"
                     /locus_tag="MOX77_000903"
     CDS             34331..35431
                     /gene="lptF"
                     /locus_tag="MOX77_000903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptF"
                     /protein_id="HCA3356526.1"
                     /translation="MIIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIP
                     ANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAA
                     MVLALFTGILAAVNVMWAGPWSSKHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLF
                     IESVDGSDFHDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNKGTRFEGTAL
                     LRDFRITDFQNYQAIIGHQAVALDPNDTDQMDMRTLWNTDNDRARAELHWRITLVFTV
                     FMMALMVVPLSVVNPRQGRVLSMLPAMLLYLLFFLIQTSIKSNGGKGKLDPVIWMWAV
                     NLIYLALAIGLNLWDTVPVRRLRARFLRKGAV"
     gene            35431..36513
                     /gene="lptG"
                     /locus_tag="MOX77_000904"
     CDS             35431..36513
                     /gene="lptG"
                     /locus_tag="MOX77_000904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptG"
                     /protein_id="HCA3356527.1"
                     /translation="MQPFGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ
                     GNYDALGAGMYTLLSVPKDIQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQV
                     ALSVMKTAIPLVLLTMAIGEWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNF
                     VYIERVKGDEELAGISIYAFNDQRRLQSVRYAASAKFDPEHKVWRLSQVDESDLQNPK
                     QITGSQTVSGTWKTNLTPDKLGVVALDPDALSISGLHNYVKYLKSSGQDAGRYQFNMW
                     SKIFQPLSVAVMMLMALSFIFGPLRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYG
                     IPPIVGALLPSASFFLISLWLMLRKS"
     gene            complement(36719..37717)
                     /locus_tag="MOX77_000905"
     CDS             complement(36719..37717)
                     /locus_tag="MOX77_000905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HCA3356528.1"
                     /translation="MRNHRISLQDIATLAGVTKMTVSRYIRSPKKVARETGERIAQIM
                     EEINYIPNRAPAMLLNAQSYTLGVLIPSFQNQLFADILAGIESVTSGHNYQTLIANYN
                     YNRDSEEESVINLLSYNIDGIILSEKYHTLRTVKFLRSATLPIVELMDIQGDRLDMEV
                     GFDNRQAAFDMVSTMLDKRQRRKILYLGSKDDIRDEQRYHGYCDAMTRRGLAPLRINP
                     RAISSIHLGIQLMRDALTAHPDVDGVFCTNDDIAMGALLWCRERQLAVPEQISIAGFH
                     GLEMGRQMIPSLASVITPRFEIGRRAAQMLLNKIKNNDLNHNTIDLGYQIYHGNTL"
     gene            complement(37781..38905)
                     /locus_tag="MOX77_000906"
                     /pseudo
     CDS             complement(37781..38905)
                     /locus_tag="MOX77_000906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463342.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
     gene            complement(38900..39271)
                     /locus_tag="MOX77_000907"
                     /pseudo
     CDS             complement(38900..39271)
                     /locus_tag="MOX77_000907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463346.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
     gene            39494..39578
                     /locus_tag="MOX77_000908"
     tRNA            39494..39578
                     /locus_tag="MOX77_000908"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:39528..39530,aa:Leu,seq:caa)
     gene            39742..41007
                     /locus_tag="MOX77_000909"
     CDS             39742..41007
                     /locus_tag="MOX77_000909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000772672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase arm-type DNA-binding domain-containing
                     protein"
                     /protein_id="HCA3356529.1"
                     /translation="MKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRR
                     PSDKKEDRLAFGVWPTVTLAQARAKRDEAKKLLVQGIDPKTEQKEAQAENSGAYTFET
                     IAREWHASNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKKVDASGKH
                     DVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARL
                     AAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRVPAKREEIKGVRYSYR
                     GMKMKEEHIVPLSRQAMVLLEQLKQISGDKELLFPGDHDATKVMSENTVNSALRAMGY
                     DTKTEVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVRAAYIHTSEHLDERRL
                     MVQWWADYLDIIQYEHITPYEYARVCNIK"
     gene            complement(41070..42146)
                     /locus_tag="MOX77_000910"
     CDS             complement(41070..42146)
                     /locus_tag="MOX77_000910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000573562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine protein kinase"
                     /protein_id="HCA3356530.1"
                     /translation="MIEVGRIIAERYKILSYVGKGGMQDVYKVLDLKLDLDLALKTPL
                     PGLESKRFLKSAKIAAKINHHNIAKTFDYVEDNGNIFLAEEFVEGENLEEKLRHFDFL
                     DPHYGACILHNLAKGIMASHKADVIHRDLKPSNVMVSGGVQISNLKITDFGIATLTQE
                     LFDEAAASGDLTRSTSGTIKGALPFMSPELMFGKKGKPIEASTDIWPLGAMMFKLLTG
                     DYPFGVYLDAAVNVKTKNRMEWPTFMTANPQYQSLSQDLQKIVDKCLSYDSDKRPTAE
                     TLVKACETLCYLSEERHVGRVNNLIQGGISGFIDGTPSNSFFSMESVYGSRYPNTSTR
                     NTVCYSTFDGHPWPRAHPVILWKD"
     gene            complement(42143..43201)
                     /locus_tag="MOX77_000911"
     CDS             complement(42143..43201)
                     /locus_tag="MOX77_000911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014913955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine protein kinase"
                     /protein_id="HCA3356531.1"
                     /translation="MKINHVLPERYSLKSTELGGGMGDILICKDNHLDRDVIVKLLKD
                     GEEERRLLDEQKALLKLRSKHVVQLYDLIDITVSEKTKKGLVLEYINGVDLNYNPSES
                     HPEKLKKLWQIACGLSDIHSAKVIHRDIKPNNIRVDENKIVKILDFGLARTSGTEAFT
                     HSVIGTLGYMAPELWKRKNISFDQKIDVYAYGVLVLDLFGIEKPDELYEHPPAAITNI
                     PELGKILPKDLARTFISCLSHDKYARPAMSSVRDQIAKYLLKDRHRALFVLNGKKYEI
                     NAKNKSVTITWGTSGSMEIVYDGFDFKVGNFSGSATINNQQVITNKVFPSCSVITLIN
                     EKSRSFVTFDISRPEVIS"
     gene            complement(43191..44354)
                     /locus_tag="MOX77_000912"
     CDS             complement(43191..44354)
                     /locus_tag="MOX77_000912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000493739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356532.1"
                     /translation="MFTERLARWLARSSAKSGINRPEDLNAVLSTDIGLVRAENQDLI
                     AAIRVNTPSNVGNPFFAMALLDGMGGMQDGKQCATIALSTLFYSLIKFRSDPPESRLL
                     KATLEANSVVYDYAKGHGGSTLSAVIIENGSAPVIVNVGDSRIYSFSLDCGLTAISSD
                     DSLEALGGRGRGLLQFIGMGESIKPHINILDKNHKNIILTSDGTHFISHSAFEELLSH
                     SSDFSTSAQRIAQYVQWCGAKDNASFGIINCNDIENSLNSHKDIGVELWDPHGNLHIM
                     WMKNYPAAQNYFSQNIVDDQDKEPSPIIDDDGFENKKTLNNPSTKNLELDSETPQREL
                     FSNESPEKSQDPSITSKAIKQRKNKDKKKAIEKIKKDQSVMINIKDEENKNED"
     gene            complement(44630..45196)
                     /locus_tag="MOX77_000913"
     CDS             complement(44630..45196)
                     /locus_tag="MOX77_000913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005134158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Polarity suppression protein"
                     /protein_id="HCA3356533.1"
                     /translation="MTTVTIQQAFEACQTNKNTWLKRKAELADLEREYREQLLAGDEQ
                     IPRRMQDLRDNIDVKKWEINQAAGRYIRSHEEVQHISIRNRLHDFMQQHGAELAATLA
                     PELMGYHEQIPAVKQSAMQHSVDYLREALSVWLAAGEKINYSVQDNDMLTTIGFRPDA
                     ASRDDNREKFTPAQNLIYTRRRAELATR"
     gene            complement(45212..45451)
                     /locus_tag="MOX77_000914"
     CDS             complement(45212..45451)
                     /locus_tag="MOX77_000914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005225309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ogr/Delta-like zinc finger family protein"
                     /protein_id="HCA3356534.1"
                     /translation="MFHCPFCKKTAHVRTSRYLSENVKQRYHQCTNIECSATFRTIES
                     VDGVIRAAPEKPDPAPVTPPPPRKVQGCYSSPFRH"
     gene            complement(45455..46198)
                     /locus_tag="MOX77_000915"
     CDS             complement(45455..46198)
                     /locus_tag="MOX77_000915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001472073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsid protein"
                     /protein_id="HCA3356535.1"
                     /translation="MKPELIIKSMQTVISKQDEGAEQRIAGALVALNEAKDAHTASMG
                     KLSDIEASIQRCEQERQTALSESAQAEQDWRSRFRTLRGNLTPELKAEHSKRIASREL
                     ADEFTGLITELEKDKSLAMLGACSSGTAYISAHEKAFTTYANSEWKKALAGISPALLR
                     AFLLRIRSLEMSGETSLRATVTRELGDALNMQSALYHFDMEQEPVLSVTGMNRPVITG
                     VDMALLRSPARRMKLAAELAAKDHEQAEG"
     gene            46738..46997
                     /locus_tag="MOX77_000916"
                     /pseudo
     CDS             46738..46997
                     /locus_tag="MOX77_000916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005224849.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AlpA family transcriptional regulator"
     gene            46994..47545
                     /locus_tag="MOX77_000917"
     CDS             46994..47545
                     /locus_tag="MOX77_000917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004153681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host cell division inhibitor Icd-like protein"
                     /protein_id="HCA3356536.1"
                     /translation="MMMTIQQTAPFSGLLLFIVSRYSFPAVAKSAAGRGNPSNLTATP
                     DAPCVFFCVYALVHLLLAQWFHDLCSYRVMVAQAGPTSVGPVSVRAGISTPVWATTTE
                     RGNSGGSITCYLTEVALMATILTPSYPQFVFVFAAVRRADRKPRICMLRTVAGDEQAA
                     RLSLVRDYVLSFAGRLPVAEVRA"
     gene            47542..47769
                     /locus_tag="MOX77_000918"
     CDS             47542..47769
                     /locus_tag="MOX77_000918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001216597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356537.1"
                     /translation="MRHTTITARDLECLEHMRNVGQLVNELMQVQDCATVRRDPVQQS
                     QLTSVIYLMTAQLDGVVERCNQRWLTGEGNV"
     gene            47766..48086
                     /locus_tag="MOX77_000919"
     CDS             47766..48086
                     /locus_tag="MOX77_000919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005224852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5375 domain-containing protein"
                     /protein_id="HCA3356538.1"
                     /translation="MKNPLPPVLRAALYRRAVACAWLTLCERQHRYPHLTLDALESAI
                     AAELEGFYLRQHGEEKGRQIACALLEDLIEAGPLKAAPSLSFLGLTVMDELCARHITA
                     PVLH"
     gene            48101..>48294
                     /locus_tag="MOX77_000920"
     CDS             48101..>48294
                     /locus_tag="MOX77_000920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000783703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HCA3356539.1"
                     /translation="MKMNVTETVKQACGHWSRILPALGVKVIKNRHQACPVCGGSDRF
                     RFDDKEGRGTWFCNQCGAGDG"
BASE COUNT        11080 a        12292 c        12755 g        12167 t
ORIGIN      
        1 cgcacggcgg ctattctcta tatcaaatct caccactgcg tacagaaaag tatgctcagc
       61 gtggagcagg ctgcggtggt ggcgcgcacg cataatctgc cgctgattgt ggacacggcg
      121 gcggaagaag atttgcagtg ctactaccgc gtgggcgcag atctcgttat ctatagcggc
      181 gcaaaagcga ttgaagggcc gaccagcggg ctggtgattg gcaaaacaca gtatgttgag
      241 tgggtaaaac gtcagtcagc gggcattggc cgggcgatga aggtcggcaa agagggaatt
      301 gttggcctga cctgcgccat tgaattgtac ctgcgggcgc aaaaagagag cggcgcggag
      361 atggtagaaa aaatggcgcc ctttatcgac acgttgaaca cgtttaacgg cgtcagcgcc
      421 cgcgtggtgt gggacagcgc cggacgcgat atcgcgcgca cggaaattaa gtttgatgaa
      481 gccgttaccg gcatcgccac aggcgacctg gtcgacgcgc tgaagcaagg ggaatacgcg
      541 atttactttc gcggatacaa agccaacgaa gggattattg aagcggatgt ccgcagcgtc
      601 gatcgcgcgc agttagcgat tgtggcgcgt cgtattggcg aggtgattaa tcaggagaaa
      661 caagcatgaa actgacccct aacttttacc gcgatcgcgt ttgcctgaac gtactggccg
      721 gttcgaaaga taacgcccgg gaaatctacg cggcggcgga aggtcatgtg ctggttggcg
      781 tgctctccaa aaactatccg gatgtggcaa gcgcagtcgc ggatatgcgt gaatatgcgg
      841 cgcttatcga caatgcgctc tccgtcggat tgggggcagg cgatcctaac cagtcggcga
      901 tggtgagcga aatctcgcgt caggtacagc cgcagcatgt caaccaggtg tttaccggcg
      961 tagggggcag ccgggcgctg ctggggcaaa acgagacggt ggtgaacggt cttgtctcgc
     1021 cgaccggcac gccggggctg gtgaaaattt ccaccggccc gctaagcagc cgcgcgccgg
     1081 acggcatcgt acccatagaa acggcgattg cgctactcaa agacatgggc ggcagctctg
     1141 ttaaatactt tccgatggga ggactcacct gtcgcgacga gtataaagcg gtggctgacg
     1201 cctgcgcccg ccatgatttc tggctggaac cgacgggcgg tatcgatctg gaaaacttcg
     1261 ccgagattct gcacatcgcc cttgatgcag gtgtaagcaa aatcattcct cacatttata
     1321 gttcgattat tgataaggtg agcggcaaca cccgtgcgga cgatgtgcgt cagttactcg
     1381 ctatcgtccg gtcgcgtgtc ggctaatcat gaggagagag acgtgcgatt ccccaaccaa
     1441 cgtttagcgc agctatttgc gatgctgcaa aacgagacgc tgccgcagga cgagctggcg
     1501 cagcggttgt cggtctccac gcgtaccgtt cgggcggata tcgccgcgct gaacatgttg
     1561 ctgacgccgc atggcgcgca atttactctc agtcgcggca acgggtatca actcaaaatt
     1621 gatgatccgg cacgttatca atccctgcaa acgcagcaat ctcccacgct ggcgcgcggt
     1681 ccgcgcacca gccaggagcg gatccactat ttgctggcgc gttttttaac ctccgccttc
     1741 tcgctgaagc tggaggattt agcagatgaa tggtttgtca gccgtgcgac gttgcagaac
     1801 gatatggcgg acgtgcgcga gcatttgctg cgttatcatc tgacgctgga aacgcgtccg
     1861 cgtcatggca tgaaattgtt tggcggagag atggcgattc gcgcctgtct gaccgacctt
     1921 ttatggacgc tggtgcagca ggagccctcc catccgttaa ttgttagtac cacgctgaac
     1981 accgaggtgt ctcaacggct gcagtctctt ttgccggata ttttctctca ttgtcaaatc
     2041 cgcctgaccg atgagggcga gctgtttctg cgtttatact gcgcggtggc ggtacggcgt
     2101 attcgcgagg ggtatccgtt atcggaatgc gtggcagagg aggtcgatga aaaggtgcgc
     2161 catgcggcgc atgagattgc ggagctacta caacagctgg ctgacaagcc gctgtcggag
     2221 ccggaagtaa gctggctgaa ggtgcatatt gccgcccgcc aggtacagga gattgccccc
     2281 agcgccatta atgccgatga tgaagaggcg ctggtgcact atatcctcaa ttttattaat
     2341 acccagtaca actataacct gttgaatgat aaacagcttc acgcggactt gctgacccac
     2401 atcaaaacga tgatcacccg cgtgcgctac cagatcatga tccccaaccc actactggaa
     2461 aatattaagc agcactatcc gatggcgtgg gatatgacgt tggcggcgat atcgagttgg
     2521 ggaaaataca cgccgtatac cattagcgaa aacgaaatcg gttttctggt gctgcatatt
     2581 ggcgttgggc tggaacgtag ttacaacatt ggctaccagc ggcagccgca ggtactgctg
     2641 gtgtgcgatg ctggtaatgc gatggtgcgg atgattgaag cggtactggc gcggaaatac
     2701 ccgcagattg agattgcccg cactctgacg ctacgcgact atgaggcgcg ggacagtatg
     2761 gtggaggatt ttgtgatttc cacagcgcgg atcggcgaaa aagataagcc ggtcatcatg
     2821 atcgcgccct ttcctaccga ctatcaattg gagcagatcg gtaagctggt gctggtggac
     2881 agaacccgtc cgtggatgct ggataaatat ttcgatgcct cgcattttcg catcgtggag
     2941 ggggaaataa atcaacagac gctgtttaaa acgctgtgcg atcagttgca cgaggaaggc
     3001 tttgttgatg cggcgtttct cgattcggtt attgaacgtg aagctatcgt cagtacgtta
     3061 ttaggcgacg ggattgcctt gccacacgcg ctggggctgc tggcgaagaa aacggtggtt
     3121 tatacggtgc tcgcgccgca ggggattgcc tggggtgacg aaacggcgca cgttattttt
     3181 ttactcgcca tcagcaaaag tgaatatgaa gaggcgatgg ccatctacga tattttcgtc
     3241 actttcctgc gcgaacgcgc catgacgcgc ctctgcgcat gtcagaattt tacgcaattt
     3301 aaaacggtcg caatggagtg tgtgagtcgc ttttgagagg cgttatccag aattcgatgt
     3361 aatgcgaatg taatgctaaa ctgcattaca cattcgattc tcctggaggc ataatggcca
     3421 cgctgaacgt ccgtctggat gacaaactca aaaatgaggc ttatgccgtg ctggaaaaac
     3481 tgaacattac tccaacggaa gccgtgcgat tactgttcca gtacgtcgcg gaaacggggc
     3541 gcatgccagt gaaaaccgtc actcttagcg acagtgaaga tgcactgatt cagacagttc
     3601 gggagaggct gtctagtccg caaaagggaa tcaaggttag tctggatgac ttatgaactg
     3661 gaattcgacc cgagggcctt aaaagagtgg cataagctgg gcgatacggt gaaggctcag
     3721 cttaagaaaa agttggctga tgtgctattg aaccccagaa tcgactctgc ccgtttaaac
     3781 ggtcttcctg actgctataa aattaagctt aaatcgtccg gttatcgtct ggtgtaccag
     3841 gttcgggatg acgttgtgat tgtgtttgtt gttgcggtcg gcaagcgaga acattcagcc
     3901 gtctatcacg atgcaaacaa acggctttag cgatcaacgc aaatgatgca ctacttggtt
     3961 gctgctaccg cgccagataa gcgccgggtc tttcagatcc tgcacaaatt tgccatcgac
     4021 cagcacgttg atgagattga ccacctgcat ctgtgcggcg ttgagttcat cgagcctgta
     4081 gccggtccac acccagatat ctttccccgg gcactccgcg tggatgcgtt gtaccagtgc
     4141 caggatatcc ggtacgtttt gcggatgcag cggatcgccg cccgacagcg agatcccctg
     4201 acggtgaatg cgcgtgtcgt tcagatcggc aatgatctta tcttccatct ctttggtaaa
     4261 cggctggccg gaattgagcc gccaggtgct tttgttatag cagccagggc attcatgcac
     4321 gcaccctgac acaaacaggg tgcagcgggt accggggccg ttaacgatgt cgacgggata
     4381 gtattgatgg tagcgcatag cgggtgtcca gaaagcatgt aggccggata aggtgcttgc
     4441 accgcatccg gcaacattgt gatgcctgat gacgacgcga ttgcgtctta tcaggcctac
     4501 ggtctttgca aacggaaatt aacctatctg cccgttgcct aaatgcttca cgcggcgctt
     4561 cacttcttcc tgcttaccgg cgttaaacgg acgcgcgtcc gggctgccta aataaccgca
     4621 cacgcgacgg gtaaccgaga cgcgcgcggc gtcgtggttg ccgcatttcg ggcaggtgaa
     4681 acctttactg gtacattcga actcgccggt aaagccgcac tcgtagcatt catcgatcgg
     4741 cgtgttggtg ccgtaatacg gtacatgctg atagctgtaa tcccagacat cttccagcgc
     4801 tttcaggttg tgctgaatgt tcgggtattc gccgtagcaa atgaaacccc cgttcgccag
     4861 cggcggatac ggcgcttcga aactgatttt gtcgtacggg ttgaccttct tctccacgtc
     4921 gaggtggaag ctgttggtgt agtaaccttt atcggttacg cccggcacca cgccgaactc
     4981 ggcggtatcc agacggcaga agcggtcaca gaggttttca cttggcgtgc tgtacagact
     5041 aaagccgtag ccggtctcgt ctttccactg atccacggcc tggcgcagac gctccacaat
     5101 cgcgatgcct ttagcgcgaa gttgctcgct gtcgtacagg tgttcgccgc cgaacagcgc
     5161 gttaatggtt tcatggatac caatgtagcc cagagagatg gacgcacgac catttttaaa
     5221 gatttcagac acgtcgtcgt ccgctttcag ccgcacgccg caggcgcctt ccatatacag
     5281 gataggcgcg acacgggctt tcacgccttc aaggcgggcg atacgggtca tcagcgcctt
     5341 ccgcgccagc gccagacgtt catccagcag tttccagaat gcggtttcgt cgccttttgc
     5401 ttccagcgcg atgcgcggca ggttaaggct aatcacgccc aagttgttac gcccgtcgtg
     5461 gatctgctcg ccgttttcgt tctcccacac gccgaggaaa ctgcggcagc ccattggcgt
     5521 tttgaacgaa ccggtgactt tgaccacctg atcgtagttg agaatgtccg gatacatgcg
     5581 cttgctcgcg cactccagcg ccagttgttt aatgtcgtag ttcggatcgc caaacttgtg
     5641 gttcaaacca tcgcggatag cgaagaccag ttttgggaac acggcggttt tgcgattttt
     5701 acccagaccg gcgatacggt tacgcaaaat agacgcctgg atcagacgcg actcccaact
     5761 ggtgccgagg ccaaaaccaa aggtcacgaa aggcgtctgg ccgttagcgg tgtgcagcgt
     5821 gttaacttcg tattccagcg actggaaggc gtcgtagcac tctttttcgg tgcgagaacg
     5881 cgcataccct tcggcatccg ggatctgcca ctcatcggcg gttttgcggt gcttgttata
     5941 gctttcggtg acaaacggcg ccagcacttc gtcgatacgg ttaatggtgg tgccgccata
     6001 aatatggctg gcgacctgcg cgataatctg cgcggtaacg gcagtggcgg tagagataga
     6061 ttttggcggt tcgatctcgg cgttacccat cttaaagccc tgggtcaaca tgcctttcag
     6121 gtcgatcaac atacagttga acatcgggaa gaacggcgaa tagtcgagat cgtgatagtg
     6181 gatatcgccg cgctcatgcg cttgtactac gtcacgcggc aacaggtgct ggcgggcata
     6241 gtgtttggcg acaatcccgg ccagcaaatc gcgctgggtg ggaatgactt tactgtcttt
     6301 gttggcgttt tcattgagca acgcggagtt agtttgctct accaggccgc gaatttcctg
     6361 gttcagacga ccacgctttt cacgctgaat gtcacgatcg tgacggtatt cgatgtaggc
     6421 gcgggcaagc tgtttgtacg ggccggacat cagttggttt tcaaccgcag tttggatctc
     6481 gttaatatcc acctgactgc gtgcgttcat ttggctgcta acgacttctg cgacggtggc
     6541 acagtaatct gcgtcatcga ctcccgctgc tttagctgca cgtagaatgg cttccttaat
     6601 gcgctctgat ttgaatggca ctttacagcc atctcgtttc atcacatgcg gtgtcatgat
     6661 cactccatat ttgtaagaac aggttatcca cagaggccgg ggaagccata acaggtttat
     6721 tcatctcttt tccaatgact tcccgcaatc ctgacccagg ttatccacaa ttcaccttgt
     6781 gtcgagtgaa caggtgttgt agcaattgta gtcaattaat acaacatatt gggtcggcgt
     6841 gcattttaaa gtctatatgt agtgatttgc atcaaggatg tttgcaattt tattgatgta
     6901 gaacaaggta aaaatcagag cgtacagatg gcgggcgctg tagcgtttgt aaaagatagc
     6961 aagaaaaatc tgattaatta ttcaacaaaa acagacagta acctggagca acgccacagc
     7021 ccgtgtcaat aggtttgtgg cgtttatccg tataaggacg tcgcgttagc gttgtaacca
     7081 ccagatggct tcaaatgggc ggagcgtcat cgcggctggc tggctggcga cctcgccata
     7141 attatgcagt agcgcctgcc actgtccttt gatatgcggt ggatgccact cctgacactg
     7201 gtcgctcaga ttggcgacaa ccagcagggt ttgcccctgc cactggcgac gataacacca
     7261 tactgatggg ctacccggga ggagatcctg ataatcgccc cagatcatta caggctgggt
     7321 tttacgtagc gcaatcagct tttgataggt gtaaaacacc gagttttcat cgcgtaatgc
     7381 cgccgcgaca ttaacctccg tatagttatc gcacaggctt atccacggct cgccctgggt
     7441 gaaaccggcg tttttaccgt tgtcccactg catcggcgtg cggctgttgt cgcgggattt
     7501 actggccagg atagccagta gttcgtcggg gtcgcgtccg gcggcgcgta gcgcggcaaa
     7561 catgttatgg ctttccacgt cgcgataatc ggtgatgcgg gtaaagtgtg ggttggtcat
     7621 gccgatttct tcgccctgat agatataagg cgtcccttgc ataccgtgca gcgccatcgc
     7681 cagcattttc gcggctggaa cccggtattc accctcgtcg ccaaagcggg aaacgatgcg
     7741 cggctgatcg tgattacacc agaataacgc gttccaggcg acgttatgca tcccctgttg
     7801 ccattggcgg aacaacgctt tcagcgccac ataatcaggt tttgccagcg tccacttttc
     7861 gccattgggg taatccacct tcagatgatg aaaattgaag gtcatcgaga gttcgtcgcc
     7921 gctaagcgcg gcatattgct ggcagttttc cagcgtggta gaggacattt cgcctaccgt
     7981 catcagatta cgcggcgtaa aaacgtcacg gttcatttcg cgtaaaaacg tatgcgtgcg
     8041 cggtccgtcg gtataaaagc ggcgtccgtc gcccgtcgga tcgtcaggaa aatcctgatc
     8101 tttggcgatc aggttcacca cgtccagacg caggccatcc acgccgcgat cggcccagaa
     8161 ttcgcagacc tttttcagct cggcgcgcac ggcggggttt tcccagttca ggtcggcctg
     8221 ttcaggcgcg aaaaggtgta aataatattg ttcgctctgg ctatgccagc gccaggcgct
     8281 gccgccaaat ttggattgcc agttattcgg gcagacatcc ggcgtgccgt cgcgccagat
     8341 gtaaaactga cggtatgggc tctctttgtt cagcgcttcg cgaaaccagg cgtgctgggt
     8401 agaagtatgg ttaaacacca tatccaggat gatgcgaatg ccgcgtgctt tcgcctgcgc
     8461 gaccagctcg tcaaaatcat ccagcgtgcc gtaggtcggg tcgatagccg tataatttgc
     8521 gacgtcataa ccgttatcca cctgtggcga gatataaaac ggcgtgagcc agatggcgtc
     8581 cacgccgagt cgctgtagat agtcaaggcg ctgcgtgacg ccgcgtaaat cgccggtgcc
     8641 gctgccggtc gtgtcctgaa aacttttcgg gtagatctga taaataacgc cgttttgcca
     8701 ccagagggga atagtcattg tagtttcctg caagtacgtt gggacgcaac tgcgccccga
     8761 agaagaatta gacaatttgt aatgtgccct gacgatgctt acgctgatag ataaaggtgg
     8821 tcagaatcac cgggataacg atcgcgataa ccatcgccat cgcaaacacc tgccagtaag
     8881 tcggctggat agagagaatg cccggcaggc cgccaacgcc gatgccgttt gccattacgc
     8941 cattcagacc acagagcaga ccggcaaggc cagagccgat catcgcgcac agcatcggga
     9001 agcgatattt gatgttgatg ctgtacattg ccggttcggc cacccccaga taggcggaga
     9061 tcgccgccgg aacggaaatt tcacgttcat tgtgtttacg gctggagatg ataatgccca
     9121 ccacggcgga ggcttgcgcg atattcgaca gcgcaatcag cggccagact ggcgtaccgc
     9181 ccatgctctg aaccatctgc atatcgatag cgagcgtggt ctggtggacg ccggtaatga
     9241 ccaacggggc atacaggaag ccgaacagcg ccgcgcctat cggggcgaaa ctgccggtca
     9301 tcagataacg taccgcaaag gccacgccgt cgccgatcat gcgaccaaag gggccgataa
     9361 aggcgtgggc gagaaagacg gccagtatca acgaacacac cgggacgacg accaggtaga
     9421 gataatccgg cacgatgcgt ttcaaccgcg tttcaataaa tccaagcgcc agtcctgcca
     9481 gtagcgccgg gataacctgc gcctggtagc ctattttctc aatactaaat acgccgaagt
     9541 tccagacgtc cggcgtttgc tggcccagca gatacgcatt catcaactgc ggcgacacca
     9601 gcgtcacgcc gagcacgata ccaagaatcg gcgtgccgcc catttttttc accgccgacc
     9661 agcagatccc caccggcaga tagaaaaaga tcgcttcgcc gatcaaccat aaaaaatcat
     9721 aaagcgtttt tagcgccgga tgcatctgcg ccagtgtttg accgtggctc atcggcacat
     9781 cgccgatcac gttacgaaag cctaagatca aaccgccgct gatcaatgcc ggtagtagcg
     9841 gaaagaagat ctccgcgaag tgggaaatta actgctcatg ccacttcatg ttctggcgag
     9901 cggctttttt tgcctgctct ttatcagcat acgctttgcc ggtggtctcc agcagcgcgt
     9961 tatagtaatc gccgacttcg gtgccgatca ccacctgaaa ctgcccggcg ttggtgaaac
    10021 agcctttaac catcggcaat tgttcgatct cttttggtcg ggcgttcgcg ggctggtgga
    10081 gcacaaagcg caggcgagta atgcagtggc tcaccgtggc gatgttgtcg cgcccgccaa
    10141 ccaggtcaat cagccggtcg atatcggctt gttttacttt gctcatcgta aagcctcatg
    10201 gcagaggagg taagttatgg gttggcgcaa gagtagctct tcaacgttgg tttaaaaatg
    10261 ggaacgttcc cgaaacgcgg cgacgatcac aaattacgca tggtattccg tttaatcagc
    10321 cactcaggcg agggtagaag gaatgacgat ccggcgcgga tcgcagcggc cattgatctg
    10381 ttcgatcagc tgcaaagccg cctgccgtcc ggcttcagca tagccaggat cgacagtgac
    10441 gatctccgga tgcaggaatt ttatcagcgg cgtattcccg atgcttgcca gttgcagcgt
    10501 ctcaatacgt tgctcctgta aatacttact ggcgcccaac gccagcgtat cggtggcgca
    10561 gactaacgcg gtggtatccg gcatgatgac acttgccgta tgctcatagc cctgcttcat
    10621 ggcaagaccg ggaagggcgg cgacgggatg aagtttatgt tttttgcaaa acgccaggta
    10681 tgcgtcatgc cgacgtttgc cggtggtaat atcgctatga ggaacgccca gaaagctaat
    10741 gttgcggtgt ccctgctcat acagccgctg cataaggata tgaatcgcgc cctcgtcgtc
    10801 gtaacagacg gaggcaaaac cttgcgcatc tcttgccagc agcaccagcg aggctttcca
    10861 gggggcgatc aactcttctg tgatgccggt aaagccaaac agcaccacgc catcaatgtt
    10921 acgtcgcctg agcatgccca gatgttccat taccagcatc ggcgagaact gactttccat
    10981 cataataggg tcgtagccct gttcataaaa cgcaggcagc atggtctgaa ccgcgaggtt
    11041 ttcagacaac gaatcaaggc gagtgacgat aatagcgacc actttatcgc tttgtccccg
    11101 catcgcacgg gcggagcggg acggagagaa accgtgttga ttcatcaccg cttcgacacg
    11161 ctcgcgggta cgtttgctta cgccgctttc attgttaagc acgcgggaaa cggttgattt
    11221 ccctacgccg ctcaggcggg caatgtcttt gatagtgagc cggttttgca tcctgttttc
    11281 ccgtggcgtg acgctgatgg tgataaaaag agtaacttta ctcaagcgaa gggcaatggg
    11341 caaagtctgg tttatcgttg gtttaattac gtaacggtat gataccgcca taattgccac
    11401 aaaacttatg gatttatgcg tataatccgc ggcgcaaatt atttacttac cggaggcgac
    11461 atggaccctg aacccacccc tctcccgcga tggagaattt tccttttccg gtaagcctgc
    11521 ctctgctgtc ttaccggtgt gtaagacagt gacacaataa cgtccctgtt tttatttaaa
    11581 cattgctcat cgggcaaggc tttgccgcgc ctgaagaatt ttctgcgcct gacttcggcg
    11641 cggagggatt acctatgcta aaaaccatta cccgccagct ttttgcccgg cttaatcgtc
    11701 atttgcctta tcgtctggtt caccgcgatc cgctgcccgg cgcgcagacc gcggtaaacg
    11761 cgactatccc gccttcgctg agcgagcgct gtctgaaaat cgcggcaatg gagcaggaga
    11821 cgctctggcg cgtttttgat acgcacccgg agggattaaa cgccgccgag gtgacgcgtg
    11881 cgcgtgaaaa gcatggcgaa aaccgccttc cggcacagaa accctcgccg tggtgggtgc
    11941 atctgtgggt atgttatcgc aatcctttca acattttact cacgattctt ggcggcattt
    12001 cttatgccac ggaggatctg tttgccgcag gcgttatcgc cctgatggtc ggtatctcaa
    12061 cgctgctgaa ttttgtgcag gaagcgcgct cgacgaaagc ggcggacgcg ctaaaagcga
    12121 tggtgagcaa taccgctacc gtactgcggg ttattaatga aaatggcgaa aacgcctggc
    12181 tggaattacc catcgatcaa ctggtgcccg gcgatattat taagctggcg gcgggggata
    12241 tgatcccggc ggatttacgg attatccagg cgcgcgatct gtttgtcgcc caggcgtcgc
    12301 tgaccggcga atctctgccg gtcgagaaag tcgccacgac gcgtgagccc cggcaaaata
    12361 acccgcttga gtgcgacacg ctgtgcttta tggggacgaa cgtcgtgagc ggaacggcgc
    12421 aggccgtggt gatggcgacc ggcgccgaca cctggtttgg tcaattggcg gggcgcgtgt
    12481 cggaacaaga taacgagcag aacgctttcc agaaaggaat tagccgcgtc agtatgttgc
    12541 tgatccgctt tatgctggtc atggcgccgg tagtactgat tattaatggt tacacgaaag
    12601 gtgactggtg ggaggcggcg ctatttgcgc tctcggtcgc ggtaggactc accccggaaa
    12661 tgttgccgat gatcgtcacc tctaccctcg cgcgcggggc ggtgaagctc tcgaaacaga
    12721 aagttatcgt gaagcacctt gatgcgattc agaacttcgg cgcgatggat attctgtgca
    12781 ccgataaaac cggcacattg acgcaggaca aaattatgct ggaaaatcat acagatattt
    12841 ccggtaagcc cagcgagcat gtactgcatt gcgcctggct gaacagccat tatcagaccg
    12901 gtctaaaaaa tttactggat acggcggtcc tggagggagt agacgaaacc gccgcgcgtc
    12961 agctctccgg acgctggcag aaaatcgatg agattccgtt tgattttgag cgtcgccgga
    13021 tgtcggtggt ggtcgccgaa gattcgaatg tgcatcaact ggtctgcaaa ggcgcgctac
    13081 aggagatcct gaacgtgtgt actcaggtgc gccacaacgg cgatattgtg ccgctggacg
    13141 acaatatgct gcgccgggtg aaacgcgtta ccgacacgct gaaccgtcag gggctacgcg
    13201 tggtcgccgt cgcgaccaaa tacctgcctg cgcgtgaggg cgattaccaa cgtatcgatg
    13261 agtctgacct cattctggaa gggtatatcg cttttctcga tccgccgaaa gagaccaccg
    13321 cgccggcgtt gaaagcgctg aaggcgagcg gaattacggt gaaaattctc accggcgaca
    13381 gcgagctggt agcggcgaaa gtttgccatg aggttgggct ggatgcgggc gatgtcgtta
    13441 ttggcagtga tattgaagga ttaagcgacg acgcgctggc ggcgctggcc gcccgtacga
    13501 cgttgtttgc gcgtctgacg ccgatgcata aagagcgcat cgtcactttg ctcaaacgcg
    13561 aggggcatgt ggtcggtttt atgggcgacg ggattaacga tgccccggcg ttgcgggcag
    13621 cggatattgg tatctcggta gatggcgcgg tggacatcgc ccgtgaggcg gccgatatta
    13681 tcctgctgga aaagagcctg atggtgctgg aagaaggcgt cattgaaggt cgtcgtactt
    13741 tttctaatat gttgaaatat atcaagatga cggccagctc aaatttcggt aacgtgttta
    13801 gcgtgctggt agcgagcgct tttttgccgt tcctgccaat gctgccgctg cacttgctga
    13861 ttcaaaacct gctgtacgat gtatcccagg tggcgattcc gtttgataat gtcgatgaag
    13921 aacaaattca aaagccgcag cgctggaatc cggcggattt ggggcgcttt atggtctttt
    13981 tcggtccgat cagctcgatt ttcgacattt tgaccttttg tctgatgtgg tgggtatttc
    14041 atgcgaatac gccagaaacg caaaccttgt tccagtccgg ctggtttgtg gtgggattac
    14101 tatcgcaaac gctgattgtg catatgatcc gtacccgtcg tctgccgttt attcaaagtc
    14161 gcgccgcctg gccgctgatg gcgatgacgt tgttggtgat ggtcgtggga gtttcgttgc
    14221 cgttttcgcc gctggcgtct tacctgcagt tgcaggcgct gccgttaagc tatttcccgt
    14281 ggctgattgc tattctggcg ggctatatga cgttaaccca gttagtgaaa gggttttaca
    14341 gccgacgtta tggctggcag taaacacttt cgtcggggat tcgccagcgt gcttaatccc
    14401 cgatatcgct aaccaaacca gatgcccgta aagctcgaca agtttaacgc gatcggcttt
    14461 atctttaaat ttcagggctt attcaagcaa ctgtagaatg ctatatgcag gcataaaaaa
    14521 gaggaatgtc cagctaagtt tgtaaaatac attctctgcc cccgagccag aacgagagga
    14581 ggagatgtcc caccgctgga tatgttttgc ggatatgcga cgaaagcggc gaatatagct
    14641 aatgcaataa actaagtaag gaggaatcgc taaggcggca gtgggtttag gaaacataag
    14701 ggtaagcaat atggctgcga taatgaagca taaaaagacg atcttcgcag tagattctat
    14761 ctgttttaat tcctggcgta tgctttcagc atgtttctcc tgccagcgac ggagcgtgct
    14821 gttgctaaat ccatattctt cgcataacgc cttattcggc acgccgtttt tagactgttg
    14881 cagaaaatcg gcgatttgct cctcggtaaa acgcgctctt accattgccg cctctccatg
    14941 gctgttggtg ccccgaaccg ggcaaacttg cgccgcccgg cggggatgac gtccggcgct
    15001 tagcgacgaa cagcgatcgc ttcaatctca attttcacgt ctttcggcag acgggcaact
    15061 tccacgcagg aacgcgccgg gaaggtcgcg ttgtgctcgg tgaagaacgc ttcgtaggtg
    15121 gcgttgacgg tcgcgaaatc gttcaggtct ttcacgaaga cggtcgtttt cacaatgtcg
    15181 cctactttca ggccagcggc ttccacgata gctttaacgt tttccagcga ctgacgtgcc
    15241 tgagcggata cgtcttccgc tacggcgccg gttttcggat cgaccggaat ctgaccggaa
    15301 gtgattacca tgctacccag gtctacgccc tgtacgtaag ggccgattgc tgctggtgca
    15361 ttttccgtcg caatagtttt gctcatgatt tctcctgaat tacagcggta atagaatgtc
    15421 cccgctcatt atagggagcc gggatctcat aaccaacccc cattagttgg ccagcaccac
    15481 attatgcgaa aactcttttt cacagtattt gcatttgagg gcgatatcat tggcgcgttt
    15541 tttcactgca aagctggagg ataccggttc cgcgtggctg atgcagttgc tgttcgggca
    15601 aaccagcaca ttattaatac gctctggcag gctggggcgc gatttcccga ccacgtcgta
    15661 gttgtcgatg cggttaacgg tggcctgcgg cgcgtacaga gcaagttggt taacctgctc
    15721 atcggtgagg aaggtgtttt ctattttgat taagtcttta cgccccatct cgccagacgg
    15781 gagattcaga ccgatagtga ttcgctgatc ggtctcggtc aatttaaaca gactcagcag
    15841 tttaaagcct acctgcgcag ggatatggtc aatcacggtg ccgcatttaa tggcttcaac
    15901 ctgcagtttg ttatcgtgtg tcatcgcttt tctcccttac agactcagtt cgctattcag
    15961 taccaacgcc agtaacgcct ggcgagcgaa aataccgttg cccgcctgtt ggaagtacca
    16021 ggcgtgtggc gttttatcca catccgtggt gatttcatca atcctcggca gcgggtgcag
    16081 cactttcata ttttcacgcg cgccgttcag gtcgctggcg cgcagaacaa actgcgcctt
    16141 cacattggcg tactccgacg ggtcgagacg ctctttctgt acgcgagtca tatagaggat
    16201 gtcgacgtcg gccatgacct cttcaataga accatgcagg ctccaggcca tccctttttc
    16261 atccagcata tccagaatgt actgcggcat cgccagcgcg tccggcgcga taaaataaaa
    16321 acggttgccg ctaaatttcg ccagcgcctg ggttagcgaa tgcacggtgc ggccatattt
    16381 cagatcgccg accatcgcga tatgcaggtt atccagacgg ccctgcgttt cctggatggt
    16441 gaacagatcc aacagagttt gcgtcggatg ctgattcgaa ccgtcgcccg cattgagcac
    16501 cggcacctga ccggaaaact ccgtcgccag acgtgccgcg ccttcttgcg gatggcgcat
    16561 cacaatcgcg tccacgtaag tgctaatcac tgagatcgtg tcggctaacg tttctccttt
    16621 tttccccagc gacgtgttgg cgctgtcgga gaagcccact acgctggcgc ccaggcgatg
    16681 cattgaggtt tcaaacgaca ggcgggtacg cgtggaggct tcgaaaaagc agctggcgat
    16741 cactttatgt ttcaaaagct ccggctgcgg gttggctttt aatttcgccg ccgtcgccag
    16801 taccagatta agatcgtcgc ggctgaggtc gtttatggaa atgatatgtt tttgatatag
    16861 cgggttagcc atgtttatct cctgacgcct gggcaaaaaa aagcccctca attgaggggc
    16921 ttggtattgg ttttcaacgg aaagaaaaac ggcaggcctg cgtctttttt cagacgcggt
    16981 aagacagaat gtcgtacaca ctgaaccatg cttcctcccg gcaaattgtc cgcgattata
    17041 ctcagctctg ttttgggatc aagcgaatta atgcatgatt tacttgtcgc aaacggttct
    17101 tatgaattta aattcatttt aagcaaataa ttaatttgtt tgtgtaccag cgccgtgcgc
    17161 tgaacgacct gtggtgcgac ccagacaata ctgctaccgg caacgacgcc gagaatttcc
    17221 ggcaatgcgt ggtaatccag aattctcgcg acggcgcgac cataacctgc cgccgtatgg
    17281 ataaggataa attcgctatt atgttcaacg ctgacgacca tttcggctat tgaacgtccg
    17341 gcatccggcg aaggacgctg ctggggattt acggaataaa tcttttgtcc tttcgcattt
    17401 ctgattttta ttgcgcccag cagcttgagc aggcgcgaaa ccgtagactg actgatacct
    17461 tcaaatccct cattttgtaa atcgcggcga atctcctcct gggacaggta acttttttca
    17521 ctaatcaggc gctgacaaac cgccagttgc tgttgttctt tggcggagta atcatcgtat
    17581 tccttcataa atgcacctta tctttattat tgatatcaac ggactggcga aattcatcac
    17641 atttgtcaca ttgattgcgg atcaatcggg cggttttgca ggaaaatgag aagctgatca
    17701 aaaaaggtga cggcgtgcct gatggcgctg tgcttatcag tcctgtcgga taagacgcgt
    17761 cgccatctgg ctcgttacat catcgctccg atgctcagta ccgccatatt cagcaatgtc
    17821 aggatcagca acagcggcgc gacccatttc agatagcgaa catagggaac ccgcgcgatc
    17881 gccagaccgc ccatgaccac ggcggaggtg ggcgtaacca ggttcacaat cccggaggcc
    17941 gactggtagg cggttacgac caaatcccgc tgtacgtggg caaaatccgc taacggcgcc
    18001 ataatgggca tcgtcaatac ggcaagaccg gaagaggagg gcaccaggaa ggagagcaat
    18061 acttccagcc agtaggttac gtttatgaaa atggtggtag agaggccgga aaccagactt
    18121 tccgcgctgt gcaaaatggt gtgggtaatc ataccgttat ccatgaccac cacaatgccg
    18181 cgcgcgatac caataattag cgccacgccg agcaaatccc gcgcgccgtc gataaaggta
    18241 ctggtgaacg cttcctcgcc catccgcgtt atcacgccaa cgataatcgc cgccgccaga
    18301 aagacgccgg agatttccgc catccaccag ccgagaaccg ccacgccgta aatcatcacc
    18361 gcgaaagagg cggcgaagat cagcagcacc catttccggg tagccgtaaa ctccagcagt
    18421 gtattggcgc gattgccgag gaaatgggcg cggttttccg ccattttatc cgccacgata
    18481 gaaagctcag gatgggcgcg gactttgcgc gcatagcgca ttacccaaaa cacgcacagt
    18541 acgtagccga caattaacag cagtacacgc atcagcatgc cctgcgtaaa agggatgccg
    18601 gcggcgttgg cggcaatgac cgtggcgaaa ggattaatgg tcgaaccgag cgtgcctatc
    18661 cccgcgccga gcagtacggt tgccgtcgcc actaacggat cgaagcgggc cgccatcatg
    18721 accggcacca gcagcgtgta gaagggcaac gactcctccg ccatgccata gatagtgccg
    18781 cctgcggcga acagcgccat cagaatgggg atcatccact catctttgcc gttgagtttg
    18841 atagttaccc gttcaatacc ggcatcaatc gcccccgttt tattcaccac ccccagaaag
    18901 ccgccgataa tcaagacaaa cagcgcgacg tcaatggcgc cggcggtgta ggtttcgtgg
    18961 ttatagaggc cgtcaatcgg cgccagtaaa acagcggtaa tcccttgcgg atgcgcgtcc
    19021 acgggggcat acgttcccgc caccggcacc tcttttccca gcgtggcgtt catcgccatt
    19081 tggtattttc ccgccggcac aatccaggtc atcaccgcga ccagggcaat aagaataaac
    19141 aggatggtat aagcggtggg aaatttaaat ttacccatga tgttctctcc tgatatcacg
    19201 gatatgcgcc gcgagggcgc atatcctgtg ggattagtcg ccgagcgtcg ccaccatgac
    19261 cgctttgatg gtgtgcatcc ggttttccgc ttcatcgaag accatcgagc ctgcggactc
    19321 gaacacctct tccgtgacct ccagtccttt caggccgtaa gccatttcga tttcgcgtcc
    19381 cactttggtg tgctcgttat ggaaggcggg caggcagtgc ataaacttca catcaggatt
    19441 accggtagcg tttaccacct gctggttgac ctgatatggc gtcatcagac tgacgcgctc
    19501 cgcccaggct tctttgggtt ctcccatcga gacccagacg tcggtataga ggaaatccac
    19561 accgtgaacg ccatcttcaa cgctctccgt taaggtgata cgagcgccgg taacgctggc
    19621 gatttcccgg cactgcgcga ccagcgcggc atcaggccag aaggactttg gcgctatcag
    19681 acggatatcc atgcccatct tcgccgcgcc caccatcagc gaattgccca tgttgttgcg
    19741 cgcgtcgccc aggtaggcga agctcagttc cggcagcgtt ttgcccggcg catgttccag
    19801 catggtcatc agatcggcca ggatctgtgt ggggtgaaat tcatcggtca ggccgttcca
    19861 gacgggaacg cccgcgtatt cccccagctc ttccacaatg tgttgaccaa atccgcgata
    19921 ttcgatgccg tcatacatcc gccccaggac gcgagcagta tctttcatgg actctttatg
    19981 gccgatctgc gagccgcttg ggccgagata agtcacctgc gcgccctggt cgaacgcggc
    20041 gacttcaaac gcgcatcggg tgcgagtaga ggttttttca aaaatcagcg cgatgttttt
    20101 gccgatcagt gtttgctttt cgcatccggc tttttttgcg gctttcagct caatagccag
    20161 atcgatgagg tgttggattt ccgccggggt gtagtcaagc agcttcaaaa agttacgatt
    20221 tttcagtgaa ataaccatta caatatcctt gttaaaatga attgcctgat ggcgctgcgc
    20281 ttatccggcc cacggttatg cgcgctctgt aggccggata aggcggaagc cgccatccgg
    20341 taaaaagcct tatgcgtcaa cgtcggcggt ttcacaccga atcaaagtac ctttctcgcc
    20401 cgcgagaatg gcttgcccat ccgccagcga gccgattccg gcaatgccgc agcaatggct
    20461 gacaaactca gcgcaggcgg tcactttcgg gcccatcgaa ccggcgtcga actgcatttc
    20521 acgaagcagc tccggcgtaa cctgcgccag cgggcgttgg gtgggtttgc cccagtcgag
    20581 atacaccgcg tcgacatcgg tcagaatgag cagcgcgtcg gcgtgaattt ggctggcaag
    20641 cagggcggcg gacagatctt tgtcgatcac cgcctcgata ccgtggtagc catcggcttt
    20701 ttccacgacc ggcacaccgc cgccgccgtt acagataacc aggtgatcgc ggctaatcag
    20761 cgcgcggatg gcatcgtttt ccacaatgcg tttcggctgc gaggagggca caacgcggcg
    20821 gaaggcgtta ccgtcggctt tgaataccca gcccttttct gcctgtaacg cacgggcctg
    20881 cgcttcgtcg taaatggggc cgatatattt ggttggattg aggaatgccg ggtcgttggc
    20941 atcgacttcg acctgggtga gcaggacgct gatttcacgc tccggcagat gattcttcag
    21001 cgcctgttgc agcatgtagc caatcatgcc ctggctttcc gcaccgagaa tatcgagcgg
    21061 gtagggcgta acgttagcgt aggcgctatt ttgtagcgcc agcagcccta tctgtgggcc
    21121 gttgccatgc actaacacta cgcgccattg ccgggtaagc tgggcgatgg ttctggccgc
    21181 cagttcgata tttttacgct gaatatcagc ctccagcggt tcgccgcgtt tgagcagcgc
    21241 attgccgccc agcgcgacga ccagtgtgcg tttgttttcc ataacgtctc ctttaaatac
    21301 catcgcgttc cagtggacag ctcatgcagc gtgcgcctcc gcgcccgcga cccagttcat
    21361 cgccgggaat gggaaggacg gtaatgccgg ctttgtcgta tttttcgttg gtccagatgt
    21421 tgcgctcata gcccaccacc acgccgggac gcagggtgag cacgttattg gcgtcattcc
    21481 actgttcgcg ctcagcttca aatgcgtcgc cgccagtggt gattaagcgc acctgatcga
    21541 tgccaagcgc tgtttcaaga gcatgaacca gcgtgctctc ctgggttcgt ttcagaccgc
    21601 cgcgtccgtc tggcgtcagc gtccagcact gaacgtccgg gcgaacgact tccggataga
    21661 cagagaaggt gtcgatatca atgtgggtca tgacggtgtc aaggtgcatg caggagcgat
    21721 gttttggcag ttcaacggca atgacgcgtt ccgcctgacg atgtttaaac aatgcctgca
    21781 ccaggaactc gacaccctgc ggcgtagtac gttcagacat accgatcaac accgcgccgc
    21841 ggccaatcac cagcacatcg ccgccctcta aagtggcgtg gtcgtaatta atgttctcgt
    21901 cgccgaaata tttaatgaaa tcaccgtctg cgaattgtgg atgccagcga taaatagcac
    21961 gtaaattatt cgtttcacgt tggcgtgcag gtttcgccat ggggttaatt gagacgccgt
    22021 tatatatcca gcaggacgtg tcacgggtaa ataggtgatt cggtaatggc ttcataataa
    22081 agtcattaat atcgtgagta tcgaccacca tattttttat ggaggcgggg atttcgccgt
    22141 aagttaaacc gccgcttaaa tggcgagcca gttcacggtg cggcatatcc gccagccagg
    22201 cgcgaatatc tgcggcaaag gtgggcccaa ggcgataatc ggaaatttgc gtatccagta
    22261 gccaggcttt agcgtcagcc acatccagtg tttgggtgag caggtcggtt aacagcaaca
    22321 cttctatccc ttgctggcgc agcgtgttgg caaaaatgtc atgctcttcg ccagcgcgct
    22381 ctacggataa tacatcgtca aaaagtaatt cctgacaatt tgaaggggta agtcttttta
    22441 ggctgagatt gggacgatgc aacattacgc tgcgtaattg accgatttca gaaccgacaa
    22501 aatgcttttc catcattata ccttttacat aatttcaaga ataaagaagg agtggctgca
    22561 aatatttagc gtgcttgcag tcgcggcgtt tcagttaaat tcgggagcaa tgattgaatt
    22621 ttatttgggt tgttaatgtg atgagattca catcaattaa ggagtgctat ttttcttact
    22681 taatatatga gccgggtcag agaaattcaa aaaacaataa ggcattaaat gaattactac
    22741 gcagctatat ggtttgttat tttttattgt taattatttg tttgttgtat tgaatgatat
    22801 ttaaatctta accacttgaa aataaagtga ttatttttaa gggttgcata actatgcgtg
    22861 agggggattt tattatcggg gatatttaaa taatttaaaa ataactatgg atatagaagt
    22921 catttatgca gggagagcga attgtgatcg ctaaaacgtt tttatgttaa cgcctttaat
    22981 atcaaagcgt tgttagtgat ggcaatttgg ctccgctgag gttaatgcat aggtactgca
    23041 taaagttggg cgaactatta acaatatata aacaccgctg gcgataaaca tgcgctggcg
    23101 caaaatcgat gagagtaagg gtagtatggc agccattttt ctcgtataaa gagaaaaata
    23161 aaacgctgtt ttaactaagg agatgcgatg attgttggca atattgaaca tctggaggcc
    23221 tggctgccga cggcgttacg gcaggcgatt gagcacgtca acgcgcatgt cacggcaacg
    23281 accgcgccag gtaagtatga cattgacggc gacaggctgt tttatatgat ttctgaaaat
    23341 atgacggagc cgggcgaatc gcgcagcgca gagtatcacg cccgttatct tgatattcag
    23401 attgtgctac aaggtcagga agggatggca ttcagtaccc ggcctgcggg aacgccgcac
    23461 acggactggt tggcggataa agacattgca tttttaccga cgagcgtcga cgagaaaacc
    23521 gtcgtcctga acgaaggtga ctttgtggtg ttttatcccg gcgaagtgca taagcccctg
    23581 tgcgcggtgg gagaaccggc gcgggtacgt aaagcggttg tgaaaatgct gatggcgtaa
    23641 tattttgtgc cggatggcgg cgcctgcacg ttgcgatctt gtaggccaac cgccatccgg
    23701 catcataacg acattattta gacagcgtcg ctaccattac cgctttgatg gtatgcattc
    23761 ggttttccgc ttcatcaaag gcaatgctgg ccgcagactc aaaaacctcg tcggtcactt
    23821 ccatcccgcc atgtaaaccg tactcttcgg ccattttttt gccgagcgtg gtttcgtcat
    23881 catggaacgc aggcagacaa tgcaggaact taacctgcgg attgccggtt aacgccatca
    23941 tctggctgtt gacctgataa tcacgcagca gggcaatacg ctccgcccat ttctctttgg
    24001 gttcgcccat agagacccaa acatcggtat agataaaatc cgcgcctttt acgcccgagg
    24061 caatatcttc ggtcagggtg atggcgccgc cgttcttttt cgccatggcg ctgcactccg
    24121 ccactaacgc ggcttgcggc cagcaggctt ttggcgcgac cagacggaga tccaatcctg
    24181 ttaacgcggc ggcttccagc atggagttac ccatgttatt gcgtgcgtct ccggcataga
    24241 ccaacgtcat ctcgttaaag gctttacccg gcagatgttc ctgcatggtg agcagatccg
    24301 ccagtaattg cgttgggtga tactcatcgg ttaaaccgtt ccataccggc acaccggaat
    24361 attcagccag cgtttcgacg atctcctggc catatcctcg atactgaata ccgtcaaaca
    24421 tccggcccag gacgcgggca gtatctttga tggactcctt atgaccgatc tggctcccgc
    24481 tggaacccag gtacgtcacg cgcgccccct gatcgtatgc ggcaacttcg aaagagcatc
    24541 gtgtccgggt cgagtctttt tcgaagatga gcgcaatatt tttacccacc agcttttgtt
    24601 cttctttacc gtttttctta tcggctttca gtttggcagc aagctgcaac agagcagtga
    24661 gttcactggc ggtgaaatca agtaacttta aaaaaggttt ttggtaaaac gtagacatac
    24721 ttccctcaca tggcttaggc ctctcattga attaaaattc actttatatg gatgattatt
    24781 catttgcaac cctgtttgat aaaacttttc tcgataaggt ggaggcaacg tcggcggtat
    24841 gtgacaataa gagtatcggc aggacatcta tgaggaacga gctatggcaa acccggaatt
    24901 actggaagag cagcgtgaag aaacgcggtt aattattgaa gagttacttg aggacggcag
    24961 cgatccggat gcgctgtaca ctatcgagca tcacctttcc gctgacgatt tcgaaacgtt
    25021 ggaaaaagcc gcggtagaag cctttaaact cggctatgaa gtgacggagc cggaagagct
    25081 ggaagtggaa gagggcgata cggttatttg ttgcgacatc ctcagcgagt gcgcgttgaa
    25141 cgccgaactc atcgacgctc aggttgagca actgatgaac ctggcggaaa aatatgatgt
    25201 cgaatacgac ggctggggaa cctatttcga agaccctaat ggcgaagagg gtgacgacga
    25261 cgattatgtc gatgaagatg acgacggcgt gcgtcactaa agctgcatag tatgacggta
    25321 cggcagcgtc tgctgtcgta tttttttaca ggttacgtat gaattacccg caaatactct
    25381 ctccggtgct taatttcctg cattgcccga cgccgcaggc gtggattgtc caggcccgcg
    25441 atccgcaaaa tcttcctctt ctgcttaccg atcacttgat ctgcgaactg aaggctgcgc
    25501 aaaccgcgtt gctgttggtg cgtaaatatg tcgccgataa atcgggcgcc gacgcgctgc
    25561 tcgcctggct gcaaccttac gaggcgttcg cgtttcgtca ggggccggag ccggattttg
    25621 ttgccctgca taaacagatt agcaaaagcg ccatgccgca aactgatgac ccctggggtc
    25681 gtcagcttat cgaccgtatg gtgttattga ttaaagagga gttgcaccat ttttggcagg
    25741 tacgcgaggt catgcaggcc agaaacattc cttatgtgaa aatcaccgcc agccgctacg
    25801 caaaaggaat gttgaaagcg gtacgcacgc acgaaccgct caccttaatt gataagctga
    25861 tttgcggggc gtatatcgaa gcccgctcct gcgaacgttt tgccgctctg gccccctggc
    25921 tggatgagga tttacagacg ttttatctct cgcttctgcg ctccgaagcg cggcattatc
    25981 aggattacct ggcgctggcg cagcagattt ccgccgagga catttctgcg cgcgtgcgct
    26041 attttggcga cgtggaagct gaccttatct tgtcgccaga ccgcgagttt cgttttcata
    26101 gcggcgtgcc agccgccgga taaagcgtaa aattaaagat tagcgttttt atcttttacg
    26161 ctgtcgccgt ctgcaaaatt tgtggtggtc atccgcccgg catcaagctg ctggcgagca
    26221 ggaaaagtca ttttcatgat attctgtcct gagtaaagcc tgccctgcgg caggcaaaaa
    26281 gaactcactc agtgttatat tcccgaaagg tgaccgtgaa caatgccatt attgcatcaa
    26341 tcactacggg tttttgtgtt gaaatagtta ctgtttcacg ccttttgacg cttcagagca
    26401 ggtcttgcca acaaaggttt gtttaatttt gttgatggag gttgttttat tacctcctgc
    26461 atcgacatcc gatttcatgg tcatcgcaaa ttctgtatcg cttattttcg tcgtttctac
    26521 aatagagtgc gatttgacat caggattatt acacacagtc tcattgatca gtttggtatc
    26581 cgtactttct acaaatgttg tcgtgcaacc gcctgcactg gtagaaaaac ccttcaccat
    26641 ttttttagaa tcttcagaca ttttaggggt ataacacata agcgtcgcta tgcccgaatt
    26701 tttttcatcc attaatactt cttttgtatc tggattgatg gtgcgcattt ctatattttc
    26761 cattttccat tcgccgggct gtatatctaa tgcatataca ttagagatac taataaacat
    26821 agcggggaaa acaattgctg ataataggcg tttcatttat aacttccttg aataataagt
    26881 gattcccgga taacaggatg tttccgggat tacttatatc agcaaaaata atacctggcg
    26941 aggataaata aacgcctggt tttcagagat cctttaacat cctcacttcg caatcgacat
    27001 gtccggtgca gccgagcggt tcgctaatat gttcaaatcc taaacgttcg tatagcgcaa
    27061 tcgcctcgcg taaaaaagcc gttgtttcca gatagcagcg tttaaaaccc tgttcacggg
    27121 catgatccag cgccatcagc gccagctttt tcgccagccc ctgaccacga attaccggta
    27181 aaaaatacat tttttgcagt tcacaaatgt ctggttcgct acaggataac ggcgccacgc
    27241 cgccgccgcc caccacacaa ccgttttgct ctaccaccca gtaggccgcg cccggttggc
    27301 tataaacctg atacagttca tccagattgg ggtcggcaac ggtataacct ttatcggcgg
    27361 taagtccgta ttccgctgaa acctgacgga tgacacgggc aatagcggca ttgtcggcgg
    27421 tagtgattcg gtgcaccgtg agcgttggcg aggcgacatt attcataata tggctcaatt
    27481 tttaaaattt atttatagat tactttaata ccaccgtctt gagttacgcg caaggagatc
    27541 ctgaatcaga caaaataaaa ggcggaaaaa ttaaacaaaa atagtatcgt agtcaaatca
    27601 gtaacaattt actggttttt attattaatt ctaatagatt gtaattcagg gatatgattc
    27661 atgaataacg ttatcagtag taaagataac cataatcaca cgttggtgtt tacaggcaag
    27721 ggcggaaagt attttgttat ttgccttgtg aatttcttgt tgacgtgtat cacgtttgga
    27781 atctatgcgc cgtgggcgat ggtgaaatgt cgacgttata tttatactaa tatgacgcta
    27841 aacaatcagc cttttgctta caaagccacg ggcggcgcat tatttattag tgtgttgtta
    27901 gtttttatta tttatattgt tagcctctct tttattgaac acggtcatcc cggtctcggt
    27961 tttacgctat tcggcttatt aattgcgatt attcctttta tggcggtgaa aggattacag
    28021 tatcaggcga tgatgacttc gcttaatggc gtacattttg gattccagtg ttccatgcgg
    28081 cgcgcctggt ggtacatgtt cgctcttccg gtactcctga tggtggcgct ttatattgtt
    28141 ctttatatta tctcactggt aaccatcgcc gtcggcggtt tagtgttcaa tatcgttttt
    28201 ctcggtttgc tggctattat tgggataggg gtcattaacg gtattaccta cagcaaatgg
    28261 atgaccttgt ttggcaatgg cgcaaacttt ggcattcatc gtttctcgat tcaggttaat
    28321 gttaaaacgt gcatcagagg gtgcgtgttg gcaatgttga ccctttttcc ttttgctgtc
    28381 gtgattggtt atctaatcgc gccggtgttc accgacatga ttcttttgag tatgatgggg
    28441 aatgcgcagg caggaggggc gcttattctg caatattatg gccagataat ggcatgttat
    28501 ttcctctatt ttctcgcgat tattgtggta accagttact tatatgtggc gttacgcaac
    28561 ctgtttttaa acaatttgtc actggcgaac gattcgattc gttttcattc ctctgtcact
    28621 gcacacggta tgctgtggcg gttactggtg gtgtttgtga tttccggcgt gaccttaggg
    28681 ctggcttatc cgtggttgaa aatttggctg gtgagctggc tggcgcagaa tacacaggtc
    28741 cagggcgatc tggattcgct tgagttaacc aatgatgaga agccgctgga aaacagcccg
    28801 ctaatgtgga tttctcgtgg catcatgcct tacttcccgt ttatctgatg taaaaaggcc
    28861 gacgtttacg tcggcccata attcatgttg tcggatggtg gcgtgaatgc cttatccggc
    28921 ctaccgatcg cgccatgtca ataagcgaac gtgtaggcct ggtaagcgaa gcgccatcag
    28981 gctttcagat tacagcgcgc taataaccgc ctgctgctca atcagcttcg ctttggcttc
    29041 tgcataaccg tccagcttct cacgctcttt ggcgatcacc gcttccggcg cgcgggcaac
    29101 gaaaccttcg ttggacagtt tgccttcgat acgggcaatc tcgccttcga ttttcgccac
    29161 ttctttcgcc agacgcgcca gctcatcttc tttgttgatg aggcccgcca tcgggattag
    29221 cagttcggca ccgtcgatga ttttggtcat ggaaaccgga cctttgtcat cggctggcag
    29281 cacggtgatg ctttccagac gcgccaggtt cagcaggaag ctacggttgt cgttaacacg
    29341 acgaacggct tcttcactac agccgcgcag cagcagttcc agcggtttgc ccggggcgat
    29401 gttcatttcc gcacgaatgt tacgtacggc aacgatcgcc tgcttcagcc actcggtatc
    29461 ggccaacgcg gcttcatcca cctgcgcggc gttatattcc gggaacggct gcagcataat
    29521 ggtatcggcg gtaatgccac agataacctt cacgcgctgc cagatggttt cggtgatgaa
    29581 cggaatgatc gggtgcgcca gacgcagcaa accttccagc acggtgacca gcgtatggcg
    29641 ggtgccacgc agttcagact cggaaccccc ggtcattacc ggtttggtca gctccagata
    29701 ccagtcgcag aactggttcc aggtgaactc gtacaggatg cctgcggcga tatcgaagcg
    29761 gaagttatcc agtgcttcgc ggtaggcttt aacggtctgg ttgaattccg ccaggatcca
    29821 gcggtccgcc agcgacaggg tcatttcgcc gccgttgaag ccgcaatcct gctcttcagt
    29881 gttcatcagc acaaagcggc tggcgttcca cagcttgtta cagaagttac ggtagccttc
    29941 cagacgcttc atatcccagt tgatgtcgcg gccggtcgag gctagcgccg ccagggtaaa
    30001 gcgcagggcg tcggtgccgt gcggctcgat gccgttcggg aactgcttct cggtacgctt
    30061 gcggattttc tccgccatct gcggctgcat catgttgccg gtgcgtttct ccagcagttc
    30121 cggcagggag atgccgtcca ccatatccag cgggtcgata acgttaccct tggatttgga
    30181 catcttctgg ccttcgtcgt cgcgaatcag accggtcatg tagacagtat ggaacggcac
    30241 ctgcggcttg ccgttttcat ctttgatgaa gtgcatggtc atcatgatca tgcgggcaat
    30301 ccagaagaag atgatatcga agccggacac catcacgctg gtgggatgga actgacgcag
    30361 ggcgtcggtg ttttctggcc agccgagggt ggagaaggtc cacagcgcgg aggagaacca
    30421 ggtatcaaga acgtcttcgt cctgacgaag ctgaacgtcg gcaccgaggt tattttcctg
    30481 acgcacttcg tcttcggtac ggccaacgta gacgttgccg tcgttgtcat accatgccgg
    30541 gatacggtga ccccaccaca gctgacgaga gatacaccag tcctgaatat cgcgcatcca
    30601 ggagaagtac atgttttcgt actgcttcgg cacgaactga atgtcgccgt tttcaaccgc
    30661 ttccaccgcc ggtttcgcca gcacgtctgc acggacgtac cactggtcgg tcagcatcgg
    30721 ttcgataact acgccgccac ggtcgccgta agggacggtc agatcgtgcg gtttaatttc
    30781 ttccagcagg cccagcgcgt caacggcagc aacgatggcc ttacgggcag caaagcgttc
    30841 cagcttctgg aactcagccg gaatctcgct ggaataaacg ttagactctt cacctttggt
    30901 atcgaacact tccgcgcttt cgcgaatgtc gccatcaaag gtcaggatgt tgatcatcgg
    30961 cagggcgtga cgtttcccga cttcatagtc gttaaagtcg tgcgccgggg tgatcttcac
    31021 gcagccggta cctttttcca tatcggcgtg ttcgtcgccc acaatcggaa tgcggcggtt
    31081 aaccagcggc agaataacga atttgccaat aagatcctta taacgcggat cttccgggtt
    31141 cacggccacg ccggtatcgc ccagtacggt ttccggacgg gtggtggcga cgaccaggta
    31201 atctttaccg tctgcggttt tcgcgccgtc ggccagcgga tagcggatgt gccacatcga
    31261 gcctttggac tcgcggtttt ccacttccag gtcagagatg gcggtgcgca gcttcggatc
    31321 ccagttcacc aggcgtttgc cacggtaaat caggtcttct ttgtacaggc ggacaaagac
    31381 ttctttcacg gcattggaaa ggccttcgtc catggtgaag cgctcgcgct cccagtcaac
    31441 ggagttgccg agacggcgca tctgacgggt aatggtgccg ccggattccg ctttccactg
    31501 ccagattttg tcgataaacg catcgcggcc gtagtcgtga cgggttttac cttcttcagc
    31561 ggcaatcttg cgctcaacca ccatctgggt tgcgatcccg gcgtggtcgg tgccgacctg
    31621 ccacagggtg tttttaccct gcatacgctg gtaacggatc atggtatcca tgatggtttg
    31681 ctggaaagca tgtcccatat gcaaactgcc ggtgacgttc ggcggcggga tcatgatgca
    31741 gaaggactct ttgctttcgt cgccgttagg cttgaaatag ccctgctttt cccagtgctc
    31801 gtaaagcggc tgttcgatat cttgggggtt atatgtcttt tccattattt ccaggttgcc
    31861 gtattcaggt taaaaccagc cacgcggtag gctttgtagc gttcgcgcgc cagttgtttc
    31921 aaagtttctt cgtaagggac gaagtctacc acttctgtga aagcggtggc aaaatctgca
    31981 aagcttgtac gcaggctgat taaaatatcg cgcgggctgc tgttgcgttt ttgcggccag
    32041 gcgatttcaa ccggcgcgcc gccgcgtggg ccttcgcctg ccagattgtg cgggacaaaa
    32101 ctttccgccg gtcttgccca cagcgcttca tccagccgaa tggcctgctt ctcatcttcg
    32161 caggcgatca gcacgcgctt gccagcgcgc caacgttctg cggcaatttc acacaccagt
    32221 tgttcaacgg cgcttaaacc gttgacggtg gtgtcattgt ccagaagata gaacgtcgca
    32281 ttcttcatat atgaggcttc ttgtggtgga tttaaatgcg ttgccatgat gcaccccgta
    32341 ggccggataa gcgtggcgcc atccggcaaa acgcctgatg gtggcgctaa tgcgccttat
    32401 caggcctacg gggtaatctc aaacttactc ttcgccgtta aagcccgcac gattgagcag
    32461 gaactgcgac agcagcgcta ccggacgacc ggtggcacct ttggctttac cggaacgcca
    32521 ggcggtaccg gcgatatcca ggtgcgccca gttgtactta cgggtaaagc gcgacaggaa
    32581 gcagcccgcg gtgatagcgc cgccaggacg accaccaatg ttcgccatat ccgcaaagtt
    32641 ggactccagt tgttcctgga actcatcgcc cagcggcaga cgccacgcgc ggtcgcccgc
    32701 ttgctcggac gcgccgatca gttcatgcgc cagcgggtta tggttcgaca tcagaccggt
    32761 aatgtgatgg cccagcgcaa tcacgcaggc gccggttagc gtcgcgacgt caatgaccgc
    32821 ttccggttcg aagcgctcaa cgtaggtcag cacgtcgcac aaaaccagac ggccttcggc
    32881 gtcggtgttc aggacttcaa cggtttgatc agacatagtg gtcagcacgt cgccagggcg
    32941 ataagcgcgt ccgcccggca tgttttcaca gcccgccagt acgccgataa cgttaatcgg
    33001 aagcttaagc tcggcgacca tacgcatcac gccgtaaacc gccgccgcgc cgcacatgtc
    33061 gtacttcatc tcgtccatcc cttcagatgg cttgatggag atgccgccgg agtcgaaggt
    33121 caggccttta cctaccagca cgatcgggcg cgcgtcttcg gacggattgc ccttgtactc
    33181 aatcaccgac atcagcgatt cattctgcga accgtggccg accgccagat aagcgttcat
    33241 acccagttcg cgcatttgct gttcgccgat cacgcgggtg atgacatttt tgctgtagct
    33301 gtcggccaac tggcgcgcct gtgacgccag gtaggcggcg ttacagatat tgggcggcat
    33361 gttgccgaga tctttcgcag ccttaatccc ggcggcgatg gccagaccgt gctgaatggc
    33421 gcgttcgccg ctggtgagct cacggcgggt cggcacatta aagaccatct tacgtagcgg
    33481 gcggcgcggc tcgctcttgt tggtcttgag ttgatcaaag ctataaagcg tctctttggc
    33541 cgtttcgacg gcctgacgca ctttccagta gttgttgcgg cctttaacgt gcagttcggt
    33601 caggaaacag acggcttcca tcgaaccagt atcattcaga gtatttatcg ttttctgaat
    33661 aacctgctta tactgacgtt catcaagctc gcgctctttg ccgcaaccaa tgaggaggat
    33721 tcgctcggaa agaacgttag gaacatggtg cagcaacaga gtctgccccg gttttccttc
    33781 cagttcgccg cgacgcagca atgcgctgat gtatccgtcg ctaattttgt cgagctgttc
    33841 tgcaatcgga gaaaggcgac gcggttcaaa gacgcccacg acaatgcagg cactccgctg
    33901 tttctccggg ctaccgcttt ttacactgaa ctccatgcac tatgctcctg aatcttaaag
    33961 acaacagtgg tggctacagc tatactcgtc gtctttcaag ttgcagatgc gttggctgcg
    34021 cctgctcacc cctgtcgctt acctgatgta agctccgggg ctccacagtc ctgccgcctg
    34081 cctgcaactc gaaatccatt agagtataga aattgaaagc tttcgtaact catatccgct
    34141 gttgcggtga cttcgtgtta atcttaacgt tattacggca ttggcacgtc agaacaagtt
    34201 ctgagaggtg aatccgctga gtataatgat cttagcgatg atttcgacga ctcaagagaa
    34261 taaatgacgt ttaagccatg aaacaagcta aattccagca aaaaaatggt tttttacggg
    34321 cgtatttaaa gtgataatca taagatatct ggtgcgggag acgctcaaaa gccagctggc
    34381 gatactcttc atcttacttt tgatcttctt ttgtcaaaag ttagtgagga ttctcggcgc
    34441 ggcggttgac ggcgatattc ccgcaaatct ggtgctctcg cttctggggc tgggcgtacc
    34501 ggaaatggcg cagctcatcc tgcctttaag cctgttcctg gggctgctga tgacgctggg
    34561 caaactgtat accgaaagtg aaattacggt catgcacgcc tgtgggttga gcaaagccgt
    34621 gctggtaaag gccgccatgg tactggcgtt atttaccggt atccttgcgg cggttaacgt
    34681 gatgtgggcc ggcccctggt cgtcaaaaca ccaggatgaa gtgctggcgg aggcgaaagc
    34741 gaaccccggt atggcggcgt tggcgcaggg gcaattccag caggcgacca acggcagctc
    34801 ggtgctgttt atcgaaagcg ttgacggcag cgacttccac gatgttttcc tggcgcaaat
    34861 tcgtcctaag ggcaatgctc gtccttctgt ggtagtggcc gattccggac accttactca
    34921 gttgcgcgat ggttcccagg ttgtcacctt aaacaaaggg acgcgttttg aagggacggc
    34981 gttgctacgc gattttcgca tcaccgactt ccagaactat caggcgatta ttggtcatca
    35041 ggccgtggcg ctggacccga acgataccga ccagatggac atgcgcacgc tgtggaatac
    35101 cgacaacgat cgcgctcgcg ccgagctgca ctggcgtatc acgttagtct ttaccgtatt
    35161 tatgatggcg ctgatggtcg tgccgctcag cgtggtgaat ccacgtcagg ggcgcgtctt
    35221 gtctatgttg cccgctatgc tgctttatct gctgttcttc ctgatccaga cctccattaa
    35281 atcgaatggc ggtaaaggca aactggaccc ggttatctgg atgtgggcgg tcaacctgat
    35341 ctatctggcg ttggcgattg gtttaaacct gtgggatacg gtgccggttc gccgcctgcg
    35401 tgcccgtttt ctgcgtaaag gagcggtata atgcagccat ttggtgtgct tgaccgctat
    35461 atcggtaaaa ccatttttac caccatcatg atgacgttgt tcatgctggt gtcgctctcc
    35521 gggatcatca agtttgtcga tcagctgaaa aaagcggggc agggtaacta cgacgcgctg
    35581 ggcgcgggta tgtacaccct gctcagcgta cctaaggata tccagatctt ctttcctatg
    35641 gcggcgctgc ttggcgcgct gctggggctg gggatgctgg cgcagcgtag cgaactggtg
    35701 gtgatgcagg catcgggttt cacccgtatg caggtggcgc tgtcggtgat gaaaacggct
    35761 atccccctgg tgctgttaac catggcgatc ggcgaatggg tcgccccgca gggcgagcag
    35821 atggcgcgta actatcgtgc gcaggcgatg tatggcggct cgctgctttc cacccagcaa
    35881 ggtctgtggg cgaaagacgg gaataacttt gtctatattg aacgggtgaa gggcgacgag
    35941 gagctggccg gcattagtat ttacgctttc aacgatcagc gtcgtttgca gtcggtgcgt
    36001 tacgccgctt cggcaaaatt cgacccggag cataaggtct ggcgtttgtc gcaggtggat
    36061 gagtccgatc tgcaaaaccc gaaacagatc accggttcgc agacggtgag cggcacctgg
    36121 aaaacgaatc tgacgccgga taagttaggc gtggtggcgc tggacccgga tgcgctttcc
    36181 atcagcggtc tgcataacta cgttaaatat ctgaagtcga gcggacagga cgctggacgt
    36241 tatcagttca atatgtggag taaaatcttc cagccgctct ccgtggcggt gatgatgctg
    36301 atggcgctgt cgtttatttt cgggccgcta cgtagtgtgc cgatgggcgt gcgtgtggtg
    36361 acggggatta gcttcggctt cgtcttttac gtcctcgacc agatttttgg cccgctgacg
    36421 ctggtatacg gcattccgcc gattgtcggc gctctgctgc cgagcgcgtc tttcttcctg
    36481 attagcctgt ggctaatgct gcgtaagtcg taatcacagt aatcgtaggc ctgatggcgc
    36541 tgtgcttttc aggcctactc cggacccgta ggccggataa ggcgttagcg ccgccatccg
    36601 gcagacagct tggtattcct cgaatgatgt agcgcgtaac ctgacgcgtg gcgcttttgg
    36661 ctacgcgtta agcacaggca agctgcggga aagagcataa gcgcagtagt tcaaaaagtt
    36721 ataatgtgtt gccgtgataa atctgataac ccaaatcaat cgtattatgg ttgagatcgt
    36781 tatttttaat tttgttgagc aacatctgcg cggctctgcg cccgatctca aaacgagggg
    36841 taattacgct ggcgaggctc ggtatcattt gcctgcccat ctccagaccg tggaagccgg
    36901 cgatggagat ctgctccggt acggccagtt gacgctcgcg gcaccacagt agagcgccca
    36961 ttgcgatatc gtcatttgta caaaagacgc catccacgtc cgggtgcgca gtaagcgcat
    37021 cacgcattag ctgtatcccc agatggatag aggagatagc gcggggattg atgcgcaacg
    37081 gcgccagccc ccggcgcgtc atcgcatcgc agtagccgtg ataacgctgc tcatcacgga
    37141 tatcgtcttt tgaacccaga tagagaattt tccgccgctg gcgtttatcc agcatggtgc
    37201 tgaccatatc aaaggcggcc tgacggttat caaaccccac ctccatatct aagcgatcgc
    37261 cctggatatc catgagttct acaatcggaa gggtagctga gcgcaggaat ttgacggttc
    37321 tgagggtatg atatttttct gaaagaataa tgccgtcgat attgtaagac agtaaattga
    37381 taacggactc ttcttccgaa tcgcgattgt aattgtaatt cgcaatgaga gtttggtagt
    37441 tatgacccga cgttacggat tcaatcccgg cgagaatgtc ggcaaacaac tgattctgaa
    37501 aagaggggat cagcacgccc agagtgtaac tttgcgcgtt taacagcata gcaggcgcgc
    37561 gatttggtat gtagttaatt tcctccatga tctgcgcaat acgctcgccg gtttccctgg
    37621 cgactttttt cggcgagcgg atgtaacggc tcaccgtcat ttttgtcacg ccagcaagcg
    37681 tagcgatatc ctgcaaagaa attctgtgat tcctcatgtt ttctccagta ccgggggcgg
    37741 gaacgtcgcc cccatggtta attgggctgc ggatgatgaa ttaatgcaga accgcattca
    37801 gcgccagtac gcccagcaac cccatgacag aaatcaatgt ttccataacg gtccaggtgc
    37861 gtagggtttc cccgacgcta agattaaaat accctttaaa cagccaaaaa ccgggatcgt
    37921 taacatgtga tgcaataacg cttcccgcgc ctgtcgccag taccattaac gccggatcgg
    37981 cgtgggttac gttaataatc ggcaatacga cgcccgctgt ggttatcgcg gccacggtcg
    38041 cggaacctaa cgcaatacgc agcacggcgg ctaccgtcca gcacattaat aacggagata
    38101 gcgaggtgcc ggtcattaat tgcgagatat attgacccac gccgctatcc accagcactt
    38161 gcttaaacgc gccgccgccc gcgatgataa aaacaatcat cgcaatagcg ccaatggact
    38221 cgccgacgat atccatcacc tgctcaaccg tacgtccatt gcgtcgcccc agcgtaaaaa
    38281 tggcgatgat aatggcaata aacaacgcca ctgctggatt accgataaat tcgaagaaaa
    38341 cccgcacggc attcgttttt ggcagcgtga tttcacatac cgctgcgatg gccatcagaa
    38401 tgaccgggat cacggcggca aaaatactgt tccagaatga cggcatctcc tcttcactga
    38461 atagatgagg attaaataat ccttcaggcg gcgctttttc aaatcgcgcc agcaattttg
    38521 aaaacagagg gccggcaaca atcacggtcg gtatggtaat gattaaccca tacagcaggg
    38581 tcgtaccgag atttgcctca aaaattgtcg caatagcggt agggccggga tgcggcggca
    38641 ggaagcagtg cgtaacggat aaggcggcga ccattggaac cccgacatac agcaatggca
    38701 gtcccgatga ggccacaatt gtaaaaacga gcggcaacag cagtacgaat ccgacttcaa
    38761 aaaacattgc caggccgacg ataagcccgg tgatcaccag cgcccattgc acgcgttttt
    38821 tgccgaacgt attaatgagc gtcgtcgcaa tgcgctgcgc ggcgccggta tcggaaatta
    38881 atcttcccag catcgcgcca aaaccgccac gattgaggat agtgggcact gccccttcca
    38941 ggcagttaat ttgattgccg ctgatacagg catcgcagtg tccgcagctg cgcgccgtcc
    39001 agccgattcc aacgcgctgg ccgactttta gtcccttatc ctgtgccgcg ctaccgagtg
    39061 cggccacccg accgatgacc tcgtgtccgg caaccagagg gtattgagag aacccccatt
    39121 cattgtcgat catcgacaga tcggaatggc agatcccgca gtagtcgacc cgtacctcga
    39181 catcttccgg ttggagttct cccgcgtcat attcatagag ttcgagctcg ccgcccgcct
    39241 ctttggcggc gtagcttttt attatcgtca ttgtgcttcc cttaatgtgg tgttgaactg
    39301 aaaagtgtag agcatggagg caagggacgc ccggcgttaa tctgctggag aaggcgggaa
    39361 gtagcctgat tattctattt aatcctcaac gctgctgaaa ttttcagcac ttagcgatac
    39421 aggtgtatgc tcgtgcttgc atggcggcgt atgacaggta taatccacaa cgttttccgc
    39481 atacctcttc agtgccgaag tggcgaaatc ggtagacgca gttgattcaa aatcaaccgt
    39541 agaaatacgt gccggttcga gtccggcctt cggcaccatt agtacttcca agaccatccg
    39601 agaaagtcca attatccctt aaaaatcaat gattgaagcg atttttacgt cctgagtcgt
    39661 ccgaggttgt ccgttgaaat ccggaagtca ttgggggcat aattgggggc atcttaactt
    39721 cgattagaaa tgtgccccca aatgaagctc aacgccagac aggtcgagac cgcaaagcca
    39781 aaagacaaaa cctacaaaat ggccgatggc ggcggtttgt accttgaggt ttcggccaag
    39841 ggatccaaat actggcgcat gaaatacaga cgcccctctg acaaaaaaga ggatcgcctc
    39901 gcttttggtg tttggcctac tgtgacactt gctcaggcaa gagcaaagcg cgatgaagcc
    39961 aaaaagttgc tagtgcaggg cattgatcca aaaaccgaac agaaagaggc tcaggccgag
    40021 aactcggggg cgtatacttt cgaaactatc gctcgtgaat ggcatgccag taacaagcgc
    40081 tggagcgaag accatcgatc gcgcgttctt cgctatcttg aactttatat tttccctcat
    40141 atcggttcgt ccgacattcg ccagctcaaa accagtcacc tgttagcccc gatcaaaaaa
    40201 gttgatgcca gtggtaaaca cgacgtcgct cagcgcctgc aacagcgcgt cacggctatt
    40261 atgcgttatg ccgtacagaa cgattacatc gactctaatc cagccagtga catggccggt
    40321 gcgttatcga ctaccaaagc acgacactat ccagccttac cttctagccg tttccctgag
    40381 tttcttgctc gccttgctgc atatcgtggc cgtgtaatga cacggattgc tgtcgagctt
    40441 tccttactaa cttttgtacg ttccagcgag ttacgtttcg cgcgttggga cgagttcgac
    40501 ttcgataaat ccctttggcg cgtaccggca aaacgagaag aaattaaggg tgtgcgttat
    40561 tcgtaccgtg gcatgaagat gaaagaggag catatcgttc ctctcagtcg gcaggcgatg
    40621 gttttgttag agcagctcaa gcagattagt ggtgataaag agctgttgtt tccgggggat
    40681 cacgacgcaa ctaaggttat gagcgaaaac acggtaaata gcgcattgcg tgcgatgggt
    40741 tatgacacaa aaaccgaggt ctgcgggcat gggtttcgga cgatggcgcg tggtgctttg
    40801 ggtgagtcag gattatggag cgatgacgcg atagagcgtc agttaagcca ttctgagcgt
    40861 aacaatgtgc gtgctgccta tattcacact tcagagcatt tggatgagcg tcgtttgatg
    40921 gtgcagtggt gggctgatta tctcgatatt attcagtatg agcatattac accttatgaa
    40981 tatgcaagag tctgcaacat aaaatgaatg atatttatag atgataattt aatggattaa
    41041 aataggcaca attacttgtg cctattaatt caatctttcc aaagaattac agggtgtgct
    41101 ctaggccatg ggtgtccatc aaaagtggaa taacaaacag tatttcttgt tgaggtgttt
    41161 gggtacctcg aaccgtatac actttccata ctaaaaaagg agttagaagg tgtcccatca
    41221 ataaatccac ttatccctcc ttgaataaga ttattgacgc gaccgacatg acgttcttcg
    41281 gataaataac aaagggtttc acatgcctta acaagcgttt cagctgtagg cctcttgtcc
    41341 gagtcataac ttaagcactt atctacaatt ttttgtagat cttgtgataa actttgatat
    41401 tgtggattgg cagtcataaa ggttggccat tccattctat tttttgtttt aacattaaca
    41461 gcagcatcta aataaacgcc aaatggatag tctcctgtta ataatttaaa catcattgca
    41521 cctaatggcc aaatatcagt tgatgcttct ataggtttac cctttttacc aaacattaat
    41581 tcaggagaca tgaagggtaa agcacctttt atcgtaccag aggtcgatct tgttaggtca
    41641 ccactggcag cagcttcatc aaaaagttct tgtgttagcg tagctattcc aaaatctgta
    41701 atttttagat tcgaaatttg tactccgcca gacaccatta cattactcgg ttttaaatct
    41761 ctatgaataa catctgcttt atgagatgcc attattcctt tagcaaggtt atgtagtata
    41821 caagcgccat aatgtgggtc taaaaaatca aagtggcgca atttttcctc aaggttttca
    41881 ccttcaacaa attcttccgc taaaaatata ttgccattat cttcaacata atcaaaggtt
    41941 tttgctatat tgtgatggtt tatttttgca gcgattttgg cacttttaag aaatcttttg
    42001 ctttccaaac caggaagtgg agtctttaaa gctaaatcta aatccagctt tagatctaaa
    42061 actttatata cgtcttgcat cccaccttta ccaacataag ataaaatctt atagcgttct
    42121 gcaatgattc ttccgacttc aatcatgata ttacctccgg tctagatata tcaaaggtga
    42181 caaagcttct agatttttca tttataagag taattacact gcagctagga aatactttat
    42241 ttgttatcac ttgttggtta ttaattgtcg cacttcctga aaaattacct actttaaagt
    42301 cgaaaccatc atatactatt tccatacttc cactagtacc ccaagtgatc gtaacacttt
    42361 tatttttagc atttatttca tatttctttc cattcaggac gaagagggca cggtgtctat
    42421 cttttaatag gtatttagct atttgatctc taaccgaaga cattgccggt cgagcatatt
    42481 tgtcatggct taagcaacta atgaaagttc tggctaagtc ctttggaagt atctttccta
    42541 attcaggtat attggttatc gcggccgggg gatgttcgta taattcatct ggtttttcta
    42601 tgccgaataa atctaaaacg aggacaccat atgcataaac atcaattttt tgatcgaaac
    42661 taatgttttt tctcttccat agttcaggag ccatatatcc taaggttcca ataacagaat
    42721 gagtgaatgc ttctgtgcct gaggtccttg ctaaaccaaa atctaatatt ttaacaattt
    42781 tattctcgtc tactctaata ttattgggct ttatatctct gtgaattact ttagcagagt
    42841 ggatgtcact taacccgcat gctatctgcc ataatttctt tagtttttcg gggtgacttt
    42901 ctgacgggtt ataatttaaa tccactccgt taatatactc cagaactaat ccttttttag
    42961 ttttttcgga gactgttatg tcaattaaat cataaagttg tactacatgt ttagaacgaa
    43021 gtttgagtag cgctttctgt tcatctagta aacgtctctc ttcttctcca tcctttaaca
    43081 actttacaat tacatctcta tctaaatgat tatccttaca tattaaaatg tcccccatgc
    43141 caccaccgag ttcagtgctc tttaatgaat atctttctgg taggacgtga ttaatcttca
    43201 tttttgtttt cctcatcctt gatatttatc attacagatt ggtctttttt gatcttttca
    43261 atagctttct ttttatcttt gttttttctt tgtttgattg ctttgcttgt aatggatgga
    43321 tcttgagatt tttctgggga ttcgtttgag aatagctctc tttgtggtgt ttcagaatct
    43381 aattctagat tttttgttga aggattgttt agtgtttttt tattttcaaa accatcatcg
    43441 tctataatag gtgaaggttc tttatcttga tcatccacta tattttgaga gaagtaattc
    43501 tgcgctgcag gataattttt catccacatg atatgtagat tcccatgagg gtcccataac
    43561 tctacaccaa tatctttatg ggagttgagg ctgttttcta tatcattgca attaataatt
    43621 ccaaatgaag cgttatcttt cgcaccgcac cattgaacat attgagctat tctctgcgct
    43681 gatgtagaaa aatcagatga atgacttaat aactcttcga atgctgaatg agaaatgaaa
    43741 tgagttccat cggatgtcaa tattatattt ttatgatttt tatctaagat attgatatga
    43801 ggctttatag attcccccat tcctataaac tggagtaatc cgcgccctct gccacccaat
    43861 gcttctagag agtcatcact gctaattgct gtaagtccac agtccagaga aaagctatat
    43921 attcgactgt cgccaacgtt gacaattaca ggagcagacc cattttcaat aattacagcg
    43981 gataatgttg aaccgccatg tccttttgca tagtcatata caacggagtt tgcttctaaa
    44041 gtcgctttta ataaccgaga ctcgggagga tcacttctaa acttaatcaa agaatagaat
    44101 aaagttgata aagcaattgt tgcgcattgc tttccatctt gcattccacc catgccatct
    44161 aataacgcca ttgcaaaaaa aggattgcca acgtttgacg gagtgttaac tctaatcgcg
    44221 gctattagat cctgattctc agctctaacc agtcctatat ccgtgctaag gacagcgttg
    44281 aggtcttctg gccggttaat gccgcttttg gccgaagaac gagctaacca gcgagcaagt
    44341 cgttctgtaa acatagtaat tccgttttat tgtgggggag tttactttcg caatgagcta
    44401 accaattgtc aattaatacg aaagagctcg cgcgcaatgc tctccccgcc acgcctgccc
    44461 gcttaagagg tcgcttttaa tgcaggtgca tgaacgtcct caggccgcac cagcactggt
    44521 gttgcgtggg ataaaaaata cggggatttg catgcaaaac catgcacctt atggatgcat
    44581 ggcttttttc aggaaaaata gcggaatttt cgggggattt tttcgcgtac taccgtgtgg
    44641 ccagttctgc acgtcggcgg gtgtaaatca ggttctgtgc cggagtgaat ttctcgcgat
    44701 tatcatcccg cgaagccgca tcaggcctga atccgatggt cgttaacata tcgttgtcct
    44761 gcacggaata attaattttt tcacctgcgg ccagccacac cgacagggct tcacgcagat
    44821 aatcaaccga gtgctgcatg gcgctctgtt ttactgcggg aatttgttcg tgatatccca
    44881 tcagctcagg cgccagcgtg gcggccagct ccgcgccgtg ctgctgcata aagtcatgga
    44941 gccggttgcg gatgctgatg tgctgtacct cctcatgtga gcggatatag cgaccggcgg
    45001 cctgattaat ctcccacttt ttcacgtcga tattgtcgcg caaatcctgc attctgcgcg
    45061 ggatttgttc gtcaccggca aggagctgtt cacggtattc ccgttcaagg tctgccagtt
    45121 cggctttacg tttcagccag gtatttttgt tcgtctgaca ggcctcaaag gcctgctgta
    45181 tggtcacagt ggtcacgagt ctctctcctg attaatgccg aaacggcgag ctgtagcagc
    45241 cctgtacttt acgcggcggc ggtggcgtca ccggcgcggg gtcgggtttc tccggtgcag
    45301 cacgtatcac accgtcaacc gactcaatgg tgcggaaagt ggccgaacat tcgatattgg
    45361 tacactggtg ataacgctgt ttgacgtttt ccgacagata ccggctggta cggacgtgcg
    45421 cggtcttttt gcagaacgga cagtgaaaca taattcagcc ctctgcctgt tcgtggtctt
    45481 ttgcggccag ttcagcggca agcttcatcc gtctggccgg gcttcttaac agcgccatat
    45541 caaccccggt tatgaccggg cgattcatgc ccgttacgga cagaaccggc tcctgctcca
    45601 tatcaaaatg atacagggct gactgcatat tcagggcatc acccagctca cgggtcacgg
    45661 tcgcacgcag cgaggtttct ccgctcattt ccagcgaccg aatacgcaac agaaaggcac
    45721 gtaacagtgc ggggctgata ccggctaacg ccttcttcca ctcgctgttg gcgtaggtag
    45781 tgaacgcttt ttcatgggcg ctgatataag ccgtaccgga ggagcatgca ccaagcatgg
    45841 cgaggctttt gtctttctcc agctcggtaa tcagaccggt gaactcatca gccagttcgc
    45901 ggctggcgat acgtttactg tgttcagctt tcagttcagg agtgaggttg ccgcgcagag
    45961 ttcgaaagcg gctgcgccag tcctgttcgg cctgtgcact ttcactgagg gcggtctgtc
    46021 gttcctgctc acaacgctga atggaagcct caatgtcgct gagtttaccc atgctggccg
    46081 tgtgtgcgtc ttttgcttcg ttaagtgcga ccagcgcacc ggcaatgcgt tgttccgcgc
    46141 cttcatcctg tttactgata acggtctgca tggatttgat aatgagttcg ggtttcatgt
    46201 tcaggctctc cgtgtgttca acctgaaatg attctgacgc ctcctgcaca acaacacgat
    46261 tcattgccgt tgtcagagtg ctggcacaaa cagaccttaa aaaccggctg gccacagaaa
    46321 ggtctcagga aaacctgact caccgtttgt ttttttacta ataactattc accactgttc
    46381 accttaaata aaaagataag taatacagtg agttaaaggg tgaatagttg aaggtctgag
    46441 tgttcaccgt ctgttcacca ctgttcaccc ttcactttgt tcagccagcc agcttcttag
    46501 attttttagc gattaaaaaa agaaatatat aaacaaaagt aatcagcaat gggccaccgg
    46561 tttgccaacg tttgccaaaa aacggccaac gtttgccact gtataaaaat cgctctgttg
    46621 tgtggtggag tactacaaaa tgacttgttg ccctgcgtaa aaatattcac aaaatagaga
    46681 gctacccgaa gccggacgga cacgaccggc actgtatgga ctttgtgagg tagcccgatg
    46741 cacaccgctt tttcttcccc gtcttctgcc cctgccgcgc cgctgatgcc ggtttctgat
    46801 accgttcatg agcgttttat tcgtctgccc gaagtgatgc atctgtgcgg tctgtcccgc
    46861 tcgaccattt acgacctcat cagccgggaa gccttcccga aacaaatctc cctcggcgga
    46921 aaaaacgtgg cgtgggcgca gtctgaaatc acggcatgga tgactgaccg catcgcaacc
    46981 ggggttatga cgcatgatga tgaccattca gcaaacagcc cctttttctg gcttgcttct
    47041 ttttatcgtt tccaggtata gttttcccgc tgtcgcaaaa tcggcagccg ggcgtggaaa
    47101 cccgagtaat ctaacggcga cacctgacgc gccatgcgtc tttttttgtg tctatgccct
    47161 cgtgcacctg ttacttgcgc aatggtttca tgacctttgc agctatcgag taatggtggc
    47221 tcaggcgggg ccgacttcgg tcgggccggt atccgttaga gccggtattt ccacccccgt
    47281 ctgggctacc accactgagc gtggaaactc cggtggtagc ataacctgct atctaacgga
    47341 ggttgccctt atggctacga tcctcacccc gtcatacccg cagtttgtct ttgtgtttgc
    47401 cgctgttcgt cgcgcagacc gtaaaccccg tatctgtatg cttcgcaccg ttgccggtga
    47461 tgaacaggcc gcacgtcttt ccctcgttcg cgattacgtc ctctcgttcg ctggtcgtct
    47521 gccggttgcg gaggtgcgcg catgagacac accaccatta ccgcccgtga cctcgaatgt
    47581 ctggagcata tgcgcaacgt cggccagctc gtcaatgagc tgatgcaggt gcaggactgc
    47641 gccaccgttc gtcgcgaccc ggtgcagcag tcacagctca cctcggtgat ttacctcatg
    47701 accgcccagc ttgacggcgt ggtagagcgc tgcaatcagc gctggctgac cggggagggc
    47761 aacgtatgaa aaatccatta ccgcccgtat tacgcgccgc gctgtatcgt cgcgccgtgg
    47821 cctgtgcctg gctgaccctg tgcgaacgcc agcaccgcta tccgcacctc accctcgacg
    47881 cgctggaaag cgccattgcc gccgagctgg agggcttcta cctgcgccag cacggagagg
    47941 aaaaaggccg ccagattgcc tgtgcactgc tggaagattt aatagaagcc gggccactta
    48001 aggccgcacc gtcgctgtcc tttctcgggc tgaccgtgat ggatgagctt tgcgcccgtc
    48061 atatcaccgc accggtactg cactgaggga gaaaataaac atgaaaatga acgtaacgga
    48121 aacggtaaaa caagcctgcg gccactggtc gcgtattctc ccggcgctgg gtgtgaaggt
    48181 gattaaaaac cgccatcagg cctgtccggt gtgcggcggc tctgaccgtt tccgctttga
    48241 cgataaagag ggacgcggga cgtggttctg caaccagtgc ggcgcgggtg acgg
//
LOCUS       DAGWFR010000014        45830 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.014, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000014 DAGWFR010000000
VERSION     DAGWFR010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 45830)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 45830)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..45830
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.014"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..1858)
                     /gene="stdB"
                     /locus_tag="MOX77_000921"
     CDS             complement(<1..1858)
                     /gene="stdB"
                     /locus_tag="MOX77_000921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial outer membrane usher protein StdB"
                     /protein_id="HCA3356540.1"
                     /translation="MKITRLAILITLTFSVLKSQATEFNASLLDSGNLSNVDLTAFSR
                     EGYVAPGNYILDIWLNDQPVREQYPVRVVPVAGRDAVVICVTTDMVAMLGLKDKIIHG
                     LKPVTGIPDGQCLELRSADSQVRYSAENQRLTFIIPQAWMRYQDPDWVPPSRWSDGVT
                     AGLLDYSLMVNRYMPQQGETSTSYSLYGTAGFNLGAWRLRSDYQYSRFDSGQGASQSD
                     FYLPQTYLFRALPALRSKLTLGQTYLSSAIFDSFRFAGLTLASDERMLPPSLQGYAPK
                     ISGIANSNAQVTVSQNGRILYQTRVSPGPFELPDLSQNISGNLDVSVRESDGSVRTWQ
                     VNTASVPFMARQGQVRYKVAAGRPLYGGTHNNSTASPDFLLGEATWGAFNNTSLYGGL
                     IASTGDYQSAALGIGQNMGLLGALSADVTRSDARLPHGQKQSGYSYRINYAKTFDKTG
                     STLAFVGYRFSDRHFLSMPEYLQRRATDGGDAWHEKQSYTVTYSQSVPVLNMSAALSV
                     SRLNYWNAQSNNNYMLSFNKVFSLGELQGLSASVSFARNQYTGGGSQNQVYATISIPW
                     GDSRQVSYSVQKDNQGGLQQTVNYSDFHNPDTTWNISAGHNRYDTGSNSSFSG"
     gene            complement(1978..2559)
                     /locus_tag="MOX77_000922"
     CDS             complement(1978..2559)
                     /locus_tag="MOX77_000922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015406296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HCA3356541.1"
                     /translation="MRNKIILAMAAAGMMYGASVYAVDPPTAGPFGSGKITFTGTITN
                     SPCDIAPGDDAITVPFGQISYRKLNTADATTDSKPFTIHLQNCAFDPNIPDTAGSAGK
                     MSKVTVSFSGGANVAKKAYTTSGSAQHVGVQLLKSDNTAIIEPNTQMPEDDAQQLQAG
                     NNELNFYARLIALDNGVTPGDFTASVTYTLKYL"
     gene            complement(3279..3911)
                     /locus_tag="MOX77_000923"
     CDS             complement(3279..3911)
                     /locus_tag="MOX77_000923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfdX family protein"
                     /protein_id="HCA3356542.1"
                     /translation="MKSHIMPGVALMVILFSGNLMAATNMTDNVTLNNDKISGQAWQA
                     MRDIGMSRFELFNGRTQKAEQLAAQAEKLLNDDSTDWNLYVKSDKKAPVEGDHYIRIN
                     SSITVAEDYLPAGQKNDAINKANQKMKEGDKKGTIEALKLAGVSVIENQELIPLQQTR
                     KDVTTALSLMNEGKYYQAGLLLKSAQDGIVVDSQSVQESPTHPVQHDAAH"
     gene            complement(3958..4494)
                     /locus_tag="MOX77_000924"
     CDS             complement(3958..4494)
                     /locus_tag="MOX77_000924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin family protein"
                     /protein_id="HCA3356543.1"
                     /translation="MNKMLLAGSAGIVLLSAAASPVWADDNASTFSLGYAQSHTNHAG
                     TLRGVRLANNYEMSPDWGLTTSFAWLNGSQRYSDESSNGRVTTRYYSLLAGPSWKINN
                     QLSLYSQVGPVLLHQRDHGINESDSKVGYGYSAGVAYTPVSNVAITLGYEGADFDATH
                     NSGSLNSNGFNLGVGYRF"
     gene            complement(5301..5699)
                     /gene="vapC"
                     /locus_tag="MOX77_000925"
     CDS             complement(5301..5699)
                     /gene="vapC"
                     /locus_tag="MOX77_000925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA(fMet)-specific endonuclease VapC"
                     /protein_id="HCA3356544.1"
                     /translation="MLKFMLDTNTCIFTIKNKPEHIRERFNLNTSRMCISSITLMELI
                     YGAEKSLAPERNFAVVEGFISRLEVLDYDTQAAIHTGQIRTELARKGTPVGSYDQMIA
                     GHARSRGLVVVTNNLREFERIPGIRIEDWC"
     gene            complement(5699..5926)
                     /gene="vapB"
                     /locus_tag="MOX77_000926"
     CDS             complement(5699..5926)
                     /gene="vapB"
                     /locus_tag="MOX77_000926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-antitoxin system antitoxin VapB"
                     /protein_id="HCA3356545.1"
                     /translation="MHTTLFFSNRTQAVRLPKSISFPEDVKHVEIIAVGRSRIITPVG
                     ESWDSWFDGEGASTDFMSTREQPAVQEREGF"
     gene            6103..6354
                     /locus_tag="MOX77_000927"
     CDS             6103..6354
                     /locus_tag="MOX77_000927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_449411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356546.1"
                     /translation="MHKKHMCPWLLPGLLGLARCAPVPHTYAAIIEAGFYPEGTDLQL
                     VLKIIETARQEIRLMDYSFTSWEVVRFEHSVSTKFSMSK"
     gene            6629..7435
                     /locus_tag="MOX77_000928"
     CDS             6629..7435
                     /locus_tag="MOX77_000928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1460 domain-containing protein"
                     /protein_id="HCA3356547.1"
                     /translation="MIMKVNAWTILLMSAHLTACAVPGTEKYQTSMDSVTAEKISRII
                     QSDVIPYKGENHGEVISRVSSAFLGTPYQADTLIGGPGIPEVLVANFNGVDCFTLADY
                     VEALARSDNQKSFLHNLARTRYAAGKVAYLSRRHFFSDWFAAAPRNARDVTPDISPDY
                     VVVDKQLNHKPDGGEYIPGLGIHPRKINYIPGRAINQQVMNHLKNGDYIGVYSPLDGL
                     DVSHVGIVVRHDEQVWFRNASSLAANRKVVDTPFMEYMHSRLGIVVLRAE"
     gene            complement(8068..9189)
                     /locus_tag="MOX77_000929"
     CDS             complement(8068..9189)
                     /locus_tag="MOX77_000929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000028980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356548.1"
                     /translation="MSITNQINKASSLASLRQPQRDKDGQIIKGSIWGTDISRTDYVQ
                     MTNGQDAQVLNVGFTDRSGRPMAFGNDSHDFVQALEDSLDETFNDGDFRTAVMENVFP
                     CEFRPYGTDPTPIRRQALQNRTVRFKHNGAFNPAKDAPSTTAIKGASVTVTPVLNPET
                     NKTGILCSAATHVSDFDMMGGWTEGALIQTVGDMQVQYSRQMFAAVVDVLKDTPDLQI
                     IEAAPLSGKPSDQAEDLLDTLALNLPVELGNTLSDYAVLVPERLEAILDRAAQRAGHE
                     DISELLGCTVCSYAGDDTGVYLLPKRFASISFRSTKDAKTVDVKVTRNSNTAGYDLEL
                     ISVVDVLATGSVKVKAGEFDVEKDASFPLIHVIRFTTPE"
     gene            complement(9291..9701)
                     /locus_tag="MOX77_000930"
     CDS             complement(9291..9701)
                     /locus_tag="MOX77_000930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000028498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356549.1"
                     /translation="MSISYRKLDIALSADKETVLVFGQELSTKYFTEIVVTTMLNSTG
                     SDMANSNRILNDIHAAGLDAGDYGKYSRWWAQSNAQERQEAERRRKEAKAHQERMAAI
                     HATPEEIAKAVAERKAREEALIKRFGNKGAAFGL"
     gene            complement(9829..10032)
                     /locus_tag="MOX77_000931"
     CDS             complement(9829..10032)
                     /locus_tag="MOX77_000931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000184035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356550.1"
                     /translation="MTNNTNDTIKIDPRTPEGRKALRLMVVPPKALIATLGLPAKENR
                     PYYSKAALCLMAVDAGLTPRDFM"
     gene            complement(10036..10755)
                     /locus_tag="MOX77_000932"
     CDS             complement(10036..10755)
                     /locus_tag="MOX77_000932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000082599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rha family transcriptional regulator"
                     /protein_id="HCA3356551.1"
                     /translation="MSQQEISIINLDQLVSMTSVEIAELTGKEHRNVLRDIRNMVEEL
                     NALKTEHCSKLSSPIGVIEDVYLNAQGKQQPLYRLDRKHTFILVAGYSVHLRAKCYDH
                     IQTLERRVLQLEDQKKRAAIQSANRRGVTWGDYCKANGLPAQKLMTILKKERKLFRVH
                     SSSGEWSVNPNYVEYFRIIKPTDHRFNPNGINIRFNAKGLEFFSRPENVLKMHRKVIA
                     VHGSDAAKQQHIQAVAKLEGR"
     gene            complement(11691..13310)
                     /locus_tag="MOX77_000933"
     CDS             complement(11691..13310)
                     /locus_tag="MOX77_000933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000935132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HCA3356552.1"
                     /translation="MLNSKTYLYQRNGVFYIRLRMKSTDRLTVSHPSHSRYKIASVSL
                     RTKDRRTAMAYSRHIKAALRAIHADRPNASYEEMREHLRDIAEWELSTGRSDLFEPDM
                     RDLYRDQYGEVGENLVHSEPLTIDQHRYINEALNVLKACMKRIEAGDSQPLIDYIDGF
                     DAAAGANDQASATLSVSAPQKTSITEGKHCVTVASLFEQYEQENAQNWKPATLRENKA
                     SHAALIEVFDYLGLNADANVLARADMLRVRDILQQLPKNRKQRFKDVPLVDLLGREDK
                     TDCLDIVTINNKYLIKMAAVFKWAVRNDLIKKNMTEGLELKVPQRKASEARNAFSTEQ
                     VGQLLAAAQVYSQRPSGKPYHYYVTALAAITGARLNEIAQLQVKDVRTTEAGTVYIHI
                     NEDDSSLPGKSIKNAHSDRCVPLVDGAYGFILADFMRLVETRRGADGDDAMVFDGLRL
                     MKNGYGEQVSKWFNRTLLPKVLADRSGLAFHSFRHTVATQLKQHGVELAYAQAIMGHS
                     SGSITYDRYAKEVEVDRLVNVMADVYKEIVG"
     gene            complement(13445..13518)
                     /locus_tag="MOX77_000934"
     tRNA            complement(13445..13518)
                     /locus_tag="MOX77_000934"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(13484..13486),aa:Gly,seq:ccc)
     gene            complement(13598..14356)
                     /locus_tag="MOX77_000935"
     CDS             complement(13598..14356)
                     /locus_tag="MOX77_000935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HCA3356553.1"
                     /translation="MVLSAGRLNKNSLGIAVLLCTGLLLAGCSSNSGSGTYSGSVYTV
                     KRGDTLYRISRATGTSVKELARLNGISPPYTIEVGQRIKVRGSAKSSSSTRKTSNKTA
                     TKTAAVRPSSSVPKSSWPPVGQRCWVWPANGKVILPYSTAEGGNKGIDIAGARGTPVY
                     AAGAGKVVYVGNQLRGYGNLIMIKHNEDYITAYAHNDTMLVNNGQSVKAGQKIATMGS
                     TDAASVRLHFQIRYRATAIDPLRYLPPQGSKPKC"
     gene            14621..15166
                     /gene="idi"
                     /locus_tag="MOX77_000936"
     CDS             14621..15166
                     /gene="idi"
                     /locus_tag="MOX77_000936"
                     /EC_number="5.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isopentenyl-diphosphate Delta-isomerase"
                     /protein_id="HCA3356554.1"
                     /translation="MTEEHVVLLDEQDKPSGTLEKYAAHTLNTPLHLAFSCWLFNEDG
                     QLLVTRRSLSKKAWPGVWTNSVCGHPQQGETTEEAIIRRCRFELGVEITDLTPVYPHF
                     SYRATDPNGIVENEVCPVFAARATSVLQVNSEEVMDYQWSEFKSVWQSLLATPWAFSP
                     WMVMQASDEQARKRLLNYCQR"
     gene            complement(15242..16759)
                     /gene="lysS"
                     /locus_tag="MOX77_000937"
     CDS             complement(15242..16759)
                     /gene="lysS"
                     /locus_tag="MOX77_000937"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001740376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HCA3356555.1"
                     /translation="MSEQNAQGADEVVDLNNEMKARREKLAALREQGIPFPNDFRRDR
                     TSDQLHAEFDAKEAEELEALNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARD
                     DLPEGVYNEQFKKWDLGDILGAKGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGL
                     QDQEARYRQRYLDLISNDESRNTFKTRSKILAGIRQFMVARGFMEVETPMMQVIPGGA
                     SARPFITHHNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFT
                     MMELYMAYADYKDLIELTESLFRTLAQDVLGTTQVPYGDEVFDFGKPFEKLTMHEAIK
                     KYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFDEVAEAHLIQPTFITE
                     YPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQRFLDQVNAKAAG
                     DDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFPAMRPVK"
     gene            complement(16769..17867)
                     /gene="prfB"
                     /locus_tag="MOX77_000938"
     CDS             complement(join(16769..17791,17793..17867))
                     /gene="prfB"
                     /locus_tag="MOX77_000938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311790.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HCA3356556.1"
                     /translation="MFEINPVNNRIQDLTERTNVLRGYLDYDAKKERLEEVNAELEQP
                     DVWNEPERAQALGKERSSLEAIVDTLDQMTQGLDDVSGLLELAVEADDEETFNEAVAE
                     LNTLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLLRMYLRWAEARG
                     FKTEVIEESEGEVAGIKSATIKISGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFS
                     SAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTGIVTQCQN
                     DRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDTKSDIGWGSQIRSYVLDDSRIK
                     DLRTGVETRNTQAVLDGSLDQFIEASLKAGL"
     gene            complement(17972..19705)
                     /gene="recJ"
                     /locus_tag="MOX77_000939"
     CDS             complement(17972..19705)
                     /gene="recJ"
                     /locus_tag="MOX77_000939"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HCA3356557.1"
                     /translation="MKQQRQLRRREADETAELPADLPPLLRRLYASRGVRSARELERS
                     VKGMLPWQQLSGIDNAVEILYNAFREGTRIIVVGDFDADGATSTALSVLGMRALGCDN
                     ISYLVPNRFEDGYGLSPEVVDQAKARGAQLIVTVDNGISSHAGVAHAKTLRIPVIVTD
                     HHLPGDTLPDAEAIINPNLRDCEFPSKSLAGVGVAFYLMLALRTFLRDKGWFDERGIA
                     PPNLAELLDLVALGTVADVVPLDANNRILTWQGLSRIRAGKCRPGIKALLEISNRDPQ
                     QLAASDLGFALGPRLNAAGRLDDMSVGVALLLCDNLGEARVLASELDALNQTRKEIEQ
                     GMQAEALILCEKLERSSETLPGGLAMYHPEWHQGVVGILASRIKERFHRPVIAFAPAG
                     DGTLKGSGRSIQGLHMRDALERLDTLYPDLMIKFGGHAMAAGLSLEEHKFEQFQQRFG
                     ELVTEWLDPALLQGEVISDGPLSAAEMSMEVAQLLRDAGPWGQMFPEPLFDGRFRLLQ
                     QRLVGERHLKVMVEPVGGGPLLDGIAFNIDTTCWPDNGVREVELAYKLDINEFRGNRS
                     LQIIIDDIWPL"
     gene            complement(19711..20424)
                     /gene="dsbC"
                     /locus_tag="MOX77_000940"
     CDS             complement(19711..20424)
                     /gene="dsbC"
                     /locus_tag="MOX77_000940"
                     /EC_number="5.3.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional protein-disulfide
                     isomerase/oxidoreductase DsbC"
                     /protein_id="HCA3356558.1"
                     /translation="MKKRFMMFTLLAAAFSGVAHADDAAIRQSLAKLGVQSTEIQASP
                     VAGMKTVLTHSGVLYVTDDGKHIIQGPMYDVSGAHPVNVTNKLLMSQLNALEKEMIVY
                     KAPDEKHVITVFTDITCGYCHKLHEEMKDYNALGITVRYLAFPRQGLESQAEQDMKSI
                     WCAKDKNKAFDDAMAGKGVKPASCDVNIADHYALGVQLGVSGTPAIVLSNGYVVPGYQ
                     GPKEMKAFLDEHQKQTSGK"
     gene            complement(20448..21344)
                     /gene="xerD"
                     /locus_tag="MOX77_000941"
     CDS             complement(20448..21344)
                     /gene="xerD"
                     /locus_tag="MOX77_000941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HCA3356559.1"
                     /translation="MEQDLARIEQFLDALWLERNLAENTLSAYRRDLSMVVAWLHHRG
                     KTLATAQADDLQTLLAERVEGGYKATSSARLLSAMRRFFQHLYREKYREDDPSAQLAS
                     PKLPQRLPKDLSEAQVERLLQAPLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSDI
                     SLRQGVVRVIGKGNKERLVPLGEEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQM
                     TRQTFWHRIKHYAVLAGIDSEKLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTT
                     QIYTHVATERLRQLHQQHHPRA"
     gene            21457..21978
                     /gene="fldB"
                     /locus_tag="MOX77_000942"
     CDS             21457..21978
                     /gene="fldB"
                     /locus_tag="MOX77_000942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin FldB"
                     /protein_id="HCA3356560.1"
                     /translation="MNMGLFYGSSTCYTEMAAEKIRDILGPELVTLHNLKDDAPALME
                     QYDVLILGIPTWDFGEIQEDWEAVWEQLDDLNLEGKIVALYGMGDQLGYGEWFLDALG
                     MLHDKLALKGVKFVGYWPTEGYEFTSNKPVIADGQLFVGLALDETNQYDLSDERIQTW
                     CEQILGEMAEHYA"
     gene            complement(22043..22444)
                     /locus_tag="MOX77_000943"
     CDS             complement(22043..22444)
                     /locus_tag="MOX77_000943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YgfX"
                     /protein_id="HCA3356561.1"
                     /translation="MVLWQSDLRVSWRAQWISLLLHGLVAAVILLMPWPLSYTPLWMI
                     LLSLVVFDCVRSQRRINTCQGEIKLLMDGRLRWQGQDWTLLRPPWLLKSGMVLRLRAE
                     SGRHQHLWLAADSMEEAEWRELRRILLQQPI"
     gene            complement(22425..22691)
                     /gene="sdhE"
                     /locus_tag="MOX77_000944"
     CDS             complement(22425..22691)
                     /gene="sdhE"
                     /locus_tag="MOX77_000944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000354044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD assembly factor SdhE"
                     /protein_id="HCA3356562.1"
                     /translation="MDIHNKARIHWACRRGMRELDISIMPFFEHEYDSLSDEEKRIFV
                     RLLQSDDPDLFNWLMNHGKPADAELEQMVRLIQTRNRERGPVAI"
     gene            22941..23921
                     /gene="ygfZ"
                     /locus_tag="MOX77_000945"
     CDS             22941..23921
                     /gene="ygfZ"
                     /locus_tag="MOX77_000945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-modifying protein YgfZ"
                     /protein_id="HCA3356563.1"
                     /translation="MAFISFPPRHPSSSARLPLTLIALDDWALSSITGVDSEKYIQGQ
                     VTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFRERDGFAWIERRSVREAQLTELKKYA
                     VFSKVVIAPDDERVLLGVAGFQARAALANVFSELPNSENQVVRDGASTLLWFEHPAER
                     FLLVTDVATANMLTEKLHGEAELNNSQQWLALDIEAGIPVIDAANSGQFIPQATNLQA
                     LGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGKASRVPEAGEDLELQMGENWRRT
                     GAILAATQLDDGQLLVQAVMNNDLEAESVFRVRDDANTLHIVPLPYSLEE"
     gene            complement(24037..24696)
                     /locus_tag="MOX77_000946"
     CDS             complement(24037..24696)
                     /locus_tag="MOX77_000946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HCA3356564.1"
                     /translation="MVQKPLMTQGYSLAEEIANSISHGIGLVFGIVGLVLLLVQAVEA
                     NAGMTAIASYSLYGGSMILLFLASTLYHAIPHQRAKIWLKKFDHCAIYLLIAGTYTPF
                     LLVGLDSPLARGLMIVIWSLALFGILFKLTIAHRFKVLSLVTYLAMGWLSLIVVYQLA
                     IKLAIGGVTLLAVGGVVYSLGVIFYVCKRIPYNHAIWHGFVLGGSVCHFLAIYLYVGQ
                     A"
     gene            complement(24860..25171)
                     /locus_tag="MOX77_000947"
     CDS             complement(24860..25171)
                     /locus_tag="MOX77_000947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ASCH domain-containing protein"
                     /protein_id="HCA3356565.1"
                     /translation="MQPNDITFFQRFQNDILAGRKTITIRDASESHFKAGDALRVGRF
                     EDDGYFCTIEVTGTSTVTLDTLNEKHAQQENMSLDELKRVIAEIYPNQTQFYVIDFKC
                     L"
     gene            25330..26763
                     /gene="bglA"
                     /locus_tag="MOX77_000948"
     CDS             25330..26763
                     /gene="bglA"
                     /locus_tag="MOX77_000948"
                     /EC_number="3.2.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase BglA"
                     /protein_id="HCA3356566.1"
                     /translation="MRKLTLPKDFLWGGAVAAHQVEGGWNKDGKGPSICDVLTSGAHG
                     VPREITQNVVAGKYYPNHEAVDFYGHYKEDIRLFAEMGFKCFRTSIAWTRIFPNGDES
                     QPNEAGLKFYDDMFDELLKYNIEPVITLSHFEMPLHLVQHYGGWTNRKVVDFFVRFAE
                     VVFERYKHKVKYWMTFNEINNQRNWRAPLFGYCCSGVVYTEHENPEETMYQVLHHQFV
                     ASTLAVKAARRINPQMKVGCMLAMVALYPFSCKPEDVMFAQESMRERYVFTDVQLRGY
                     YPSYVLNEWERRGFNIKMEDGDLEVLREGTCDYLGFSYYMTNAVKAEGGSGDAISGFE
                     GSVPNPYVKASDWGWQIDPVGLRYSLCELYERYQKPLFIVENGFGAYDKVEEDGSIND
                     DYRIDYLRAHIEEMKKAVTYDGVDLMGYTPWGCIDCVSFTTGQYSKRYGLIYVNKHDD
                     GTGDMSRSRKKSFNWYKEVIASNGEKL"
     gene            complement(26811..27704)
                     /locus_tag="MOX77_000949"
     CDS             complement(26811..27704)
                     /locus_tag="MOX77_000949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HCA3356567.1"
                     /translation="MKRFIFLPLMTYFLLMNAMAANGENNPSNLLGAPVNTAISGGSV
                     LPEGKLLTAVNSSFRDKDHQIEGHGSPDVYSQIWLLKIRYGLTDRLELSTVGSYINNK
                     RDNLSPEHIEGMSDQSVGVNYALMSQRRGDPFWVTVGGAVLLPTGQDGDNHLPGNSAW
                     GGRVTLTLTKLFTPNIKGDMGFVYQGPFERGNQDVKRGNEFQWNTQVRYMFSDLPLDL
                     GLESAYSNNASGTKKLSNGSVINNHSGTTEWVVGPSFNIAVDSLKLWFGAGAFFPVMQ
                     EAKSPTKMEDVRWEFKIGKTW"
     gene            complement(28160..31033)
                     /gene="gcvP"
                     /locus_tag="MOX77_000950"
     CDS             complement(28160..31033)
                     /gene="gcvP"
                     /locus_tag="MOX77_000950"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase"
                     /protein_id="HCA3356568.1"
                     /translation="MTQTLSQLENRGAFIERHIGPDAAQQQEMLNAVGAESLNALTGQ
                     IVPKDIQLATPPQVGEAATEYAALAELKAIAGRNKRFTSYIGMGYTAVQLPPVILRNM
                     LENPGWYTAYTPYQPEVSQGRLEALLNFQQVTLDLTGLDMASASLLDEATAAAEAMAM
                     AKRVSKLKNANRFFVAADVHPQTLDVVRTRAKTFGFDVIVDDADKVLDHQDVFGVLLQ
                     QVGTTGEIHDYGTLISELKARKVIVSVAADFMALVLLTAPGKQGADIVFGSAQRFGVP
                     MGYGGPHAAFFAAKDEFKRSMPGRIIGVSKDAAGNTALRMAMQTREQHIRREKANSNI
                     CTSQVLLANIASLYAVYHGPVGLKRIANRIHRLTDILAAGLQQKGLKLRHAHYFDTLC
                     VEVADKAAVLARAEAAEINLRSDIHNAVGITLDETTTRENVAQLFNVLLGDSHGLNIE
                     TLDKDVALDSRSIQQGMLRDDAILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIP
                     LGSCTMKLNAAAEMIPITWPEFAELHPFCPPEQAEGYHQMISQLSDWLVKLTGYDAVC
                     MQPNSGAQGEYAGLLAIRHYHGSRNEGHRDICLIPASAHGTNPASAHMAGMQVVVVAC
                     DKNGNIDLDDLRAKAEQHAANLSCIMVTYPSTHGVYEETIREVCEVVHQFGGQVYLDG
                     ANMNAQVGITSPGFIGADVSHLNLHKTFCIPHGGGGPGMGPIGVKAHLAPFVPGHSVV
                     QIEGMLTRQGAVSAAPFGSASILPISWMYIRMMGAEGLKQASQVAILNANYIASRLKD
                     AYPVLYTGRDGRVAHECILDIRPLKEETGISELDIAKRLIDYGFHAPTMSFPVAGTLM
                     VEPTESEGKAELDRFIDAMLAIRAEIDQVKAGVWPLEDNPLVNAPHIQSELVAEWAHP
                     YSREVAVFPAGVADKYWPTVKRLDDVYGDRNLFCSCVPISDYQ"
     gene            complement(31196..31585)
                     /gene="gcvH"
                     /locus_tag="MOX77_000951"
     CDS             complement(31196..31585)
                     /gene="gcvH"
                     /locus_tag="MOX77_000951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HCA3356569.1"
                     /translation="MSNVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVD
                     LPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWI
                     FKIKASDESELESLLDATAYEALLEDE"
     gene            complement(31611..32705)
                     /gene="gcvT"
                     /locus_tag="MOX77_000952"
     CDS             complement(31611..32705)
                     /gene="gcvT"
                     /locus_tag="MOX77_000952"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HCA3356570.1"
                     /translation="MAQQTPLYEQHTLCGARMVDFHGWMMPLHYGSQLDEHHAVRTDA
                     GMFDVSHMTIVDLHGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDDLIVY
                     YFTEDFFRLVVNSATREKDLSWITQHAEPYAIDITVRDDLSLIAVQGPNAQEKAATLF
                     TDQQRHAVEGMKPFFGVQAGDLFIATTGYTGEAGYEIAMPNEKAADFWRALVEAGVKP
                     CGLGARDTLRLEAGMNLYGQEMDEGISPLAANMGWTIAWEPADRDFIGREALEMQREK
                     GHEQLVGLVMTEKGVLRNELPVRFTDAQGNQQEGIITSGTFSPTLGYSIALARVPAGI
                     GETAIVQIRNREMPVKVTKPVFVRNGKAVA"
     gene            complement(33160..34362)
                     /gene="ubiI"
                     /locus_tag="MOX77_000953"
                     /gene_synonym="visC"
     CDS             complement(33160..34362)
                     /gene="ubiI"
                     /locus_tag="MOX77_000953"
                     /gene_synonym="visC"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent 2-octaprenylphenol hydroxylase"
                     /protein_id="HCA3356571.1"
                     /translation="MQSVDVAIVGGGMVGLAVACGLQGSGLRVAVLDHVVPQQLANDA
                     PPQLRVSAINAASEKLLTRLGVWSNIVARRASCYHGMEVWDKDSFGRITFDDASMGYS
                     HLGHIVENSVIHYALWQKAQQAADITLMAPAELQQVAWGENDAFLTLKDGAMLTARLV
                     IAADGANSWLRNKADIPLTFWDYRHHALVATIRTEEPHGAVARQVFHGEGILAFLPLS
                     DPHLCSIVWSLSPQDAERMQQSGDEAFNQALTIAFDNRLGLCRLESERQVFPLTGRYA
                     RQFAAHRLALVGDAAHTIHPLAGQGVNLGFMDAAELVDDLCRLQRQGKDIGQHLYLRR
                     YERSRKHSAAMMLAGMQGFRDLFAGENPAKKLLRDIGLKLADTLPGVKPQLLRQAMGL
                     NDLPQWLR"
     gene            complement(34491..35669)
                     /gene="ubiH"
                     /locus_tag="MOX77_000954"
                     /gene_synonym="visB"
     CDS             complement(34491..35669)
                     /gene="ubiH"
                     /locus_tag="MOX77_000954"
                     /gene_synonym="visB"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461973.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-octaprenyl-6-methoxyphenyl hydroxylase"
                     /protein_id="HCA3356572.1"
                     /translation="MSVIIVGGGMAGATLALAISQFSHGTLPVHLIEAKAPEADGHPG
                     FDARAIALAAGTCQQLARIGVWQAISDCATAINTVHVSDRGHAGFVTLDAQDYSLAAL
                     GHVAELHDIGLRLFALLRKAPGVTLHCPERVASVSRTQQQVNVTLENGNVIAGSVLVA
                     ANGTHSALASACGVDWHQEPYEQLAVIANVATAIPHQGRAFERFTPNGPLAMLPMSHG
                     RCSLVWCHPLDQRDEVLSWSDAQFCHALQAAFGWRLGRITQAGKRSAYPLALTTAAKV
                     FTHRTVVVGNAAQTLHPIAGQGFNLGLRDVMSLAETLVAAQDAGEDIGAWHVLSRYQQ
                     RRQVDRDTTIGVTNGLVHLFANRWAPLVIGRNIGLMAMELLPPARDALAQRTLGWVAR
                     "
     gene            complement(35666..36982)
                     /gene="pepP"
                     /locus_tag="MOX77_000955"
     CDS             complement(35666..36982)
                     /gene="pepP"
                     /locus_tag="MOX77_000955"
                     /EC_number="3.4.11.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro aminopeptidase"
                     /protein_id="HCA3356573.1"
                     /translation="MTQQEYQRRRQALLAQMQPGSAALIFAAPEATRSADSEYPYRQS
                     SDFWYFTGFNEPEAVLVLIKSDDTHNHSVLFNRVRDLTAEIWFGRRLGQDAAPEKLGV
                     DRALAFSEINQQLFQLLNGLDVVYHAQGEYAYADEIVLAALEKLRKGSRQNLTAPATM
                     TDWRPIVHEMRLFKSPEEIAVLRRAGEISALAHIRAMEKCRPGMFEYQLEGEIHHEFN
                     RHGARYPSYNTIVGSGENGCILHYTENESEMRDGDLVLIDAGCEYKGYAGDITRTFPV
                     NGKFTPAQREIYDIVLESLETSLRLFRPGTSIQQVTGEVVRIMITGLVKLGILQGEVD
                     QLIAENAHRPFFMHGLSHWLGLDVHDVGVYGPDRSRILEPGMVLTVEPGLYIAPDADV
                     PEAYRGIGVRIEDDIVITETGNENLTAGVVKKADDIEALMAAARQQ"
     gene            complement(37008..37586)
                     /locus_tag="MOX77_000956"
     CDS             complement(37008..37586)
                     /locus_tag="MOX77_000956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708672.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YecA family protein"
                     /protein_id="HCA3356574.1"
                     /translation="MSIQNEMPGYDEMNRFLNQQGAGLTPAEMHGLISGMICGGNNDS
                     SWQPLLHDLTNEGLAFGHELAQALRKMHAATSDALEDDGFLFQLYLPEGDDVSVFDRA
                     DALAGWVNHFLLGLGVTQPKLDKVTGETGEAIDDLRNIAQLGYDESEDQEELEMSLEE
                     IIEYVRVAALLCHDTFTRQQPTAPEVRKPTLH"
     gene            37753..38082
                     /gene="zapA"
                     /locus_tag="MOX77_000957"
     CDS             37753..38082
                     /gene="zapA"
                     /locus_tag="MOX77_000957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HCA3356575.1"
                     /translation="MSAQPVDIQIFGRSLRVNCPPDQRDALNQAADDLNQRLQDLKVR
                     TRVTNTEQLVFIAALNISYELTQEKAKTRDYAASMEQRIRMLQQTIEQALLDQGRITE
                     KTGQNFE"
     gene            38124..38307
                     /gene="ssrS"
                     /locus_tag="MOX77_000958"
     ncRNA           38124..38307
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="MOX77_000958"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            38328..38924
                     /locus_tag="MOX77_000959"
     CDS             38328..38924
                     /locus_tag="MOX77_000959"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311809.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HCA3356576.1"
                     /translation="MTQLPELSLSRQEIRRMIRQRRRALTPEQQRRFGQQAAARMLSF
                     PPVVMAHTVAVFLSFDGELDTQPLIEQLWQAGKRVYLPVLHPFSPGNLLFLHYHPQSA
                     LVTNRLNIREPRLDVRDVLPLAKLDVLVTPLVAFDEGGQRLGMGGGFYDRTLQNWQQH
                     KILPVGYAHDCQLVEKLPVEEWDIPLPAVVTPSKIWEW"
     gene            complement(39305..40537)
                     /gene="serA"
                     /locus_tag="MOX77_000960"
     CDS             complement(39305..40537)
                     /gene="serA"
                     /locus_tag="MOX77_000960"
                     /EC_number="1.1.1.95"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HCA3356577.1"
                     /translation="MAKVSLEKDKIKFLLVEGVHQKALESLRAAGYTNIEYHKGALDA
                     EQLKASIRDAHFIGLRSRTHLTEEVINAAEKLVAIGCFCIGTNQVDLNAAAKRGIPVF
                     NAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVWNKLAAGSFEARGKKLGIIGYG
                     HIGTQLGILAESLGMHIYFYDIENKLPLGNATQVQHLSELLNMSDVVSLHVPENASTK
                     NMMGAKEIALMKPGSLLINAARGTVVDIPALCDALATKHLAGAAIDVFPTEPATNSDP
                     FTSPLCEFDNVILTPHIGGSTQEAQENIGLEVAGKLIKYSDNGSTLSAVNFPEVSLPL
                     HGGRRLMHIHENRPGVLTALNQIFAEQGVNIAAQYLQTSARMGYVVIDIEADGDVAEK
                     ALLAMKAIPGTIRARLLY"
     gene            complement(40803..41462)
                     /gene="rpiA"
                     /locus_tag="MOX77_000961"
     CDS             complement(40803..41462)
                     /gene="rpiA"
                     /locus_tag="MOX77_000961"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HCA3356578.1"
                     /translation="MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTMKG
                     QIEGAVSSSDASTEKLKGLGIHVFDLNEVDSLGIYVDGADEINGHMQMIKGGGAALTR
                     EKIIASVAEKFICIADASKQVDILGKFPLPVEVIPMARSAVARQLVKLGGRPEYRQNV
                     VTDNGNVILDVYGMEILDPIALENAINAIPGVVTVGLFANRGADVALIGTPDGVKTIV
                     K"
     gene            41615..42508
                     /gene="argP"
                     /locus_tag="MOX77_000962"
     CDS             41615..42508
                     /gene="argP"
                     /locus_tag="MOX77_000962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator ArgP"
                     /protein_id="HCA3356579.1"
                     /translation="MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLEN
                     MFGQPLLVRTVPPRPTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSL
                     ATWLLPALAPVLADSPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLG
                     ALDYLFVASKPFAERYFPNGVTRSSLLKAPAVAFDHLDDMHQAFLQQNFDLPPGSVPC
                     HIVNSSEAFVQLARQGTACCMIPHLQIEKELESGELINLTPGLLQRRMLYWHRFAPES
                     RMMRKVTDALLEYGHKVLRQD"
     gene            42520..42726
                     /locus_tag="MOX77_000963"
     CDS             42520..42726
                     /locus_tag="MOX77_000963"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356580.1"
                     /translation="MPDGGVNVLSGLHDPLFPRRFFEIDHKIIAFRRQKTTRHWLFFA
                     GGKATQNAHRIIKSSFHCVIRSKK"
     gene            complement(42774..43520)
                     /locus_tag="MOX77_000964"
     CDS             complement(42774..43520)
                     /locus_tag="MOX77_000964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative stress defense protein"
                     /protein_id="HCA3356581.1"
                     /translation="MKFKVMALAALVGLSAMSAQASELPEGPHIVTSGTASVDAVPDI
                     ATLAIEVNVAAKDAATAKKQADERVAQYLSFLEQNQIAKKDISAANLRTQPDYDYQNG
                     KSILKGYRAVRTVEVTLRQLDKLNSLLDGALKAGLNEIRSVSLGVAQPDAYKDKARKA
                     AIDDAIHQAQALAAGFNSKLGPVYSVRYHVSNYQPSPVVRMMKAADAAPVSAQETYEQ
                     PTIQFDDQVDVVFQLEPGTGQTSTTAASTQ"
     gene            complement(43614..44249)
                     /gene="argO"
                     /locus_tag="MOX77_000965"
     CDS             complement(43614..44249)
                     /gene="argO"
                     /locus_tag="MOX77_000965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine exporter ArgO"
                     /protein_id="HCA3356582.1"
                     /translation="MISYYFQGVALGAAMILPLGPQNAFVMNQGIRRQYHLMIALLCA
                     LSDLVLISAGIFGGSALLMQSPWLLALVTWGGVAFLLWYGFGALKTAMSSNLELASAE
                     VMKQGRWKIIATMLAVTWLNPHVYLDTFVVLGSLGGQLAMEPKRWFALGTISASFLWF
                     FGLALLAAWLAPRLRTAKAQRIINILVGVVMWLIAFQLAREGVAHMHALFN"
     gene            complement(44450..45310)
                     /locus_tag="MOX77_000966"
     CDS             complement(44450..45310)
                     /locus_tag="MOX77_000966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="small-conductance mechanosensitive channel MscS"
                     /protein_id="HCA3356583.1"
                     /translation="MEDLNVVDSINGAGTWLVRNQALLLSYAVNIVAAIAIIIIGLIV
                     ARVISNTVNRLMRARHIDATVADFLSALVRYGVIAFTLIAALGRVGVQTASVIAVLGA
                     AGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLNVQIFSTTMRAVDG
                     KIIVIPNGKIIAGNIINYSREPVRRNEFIIGVAYDSDIDQVKQLLTTIIESDDRILKD
                     REMTVRLNELGASSINFVVRVWSKSSDLQNVYWDVLERIKREFDAAGISFPYPQMDVN
                     FKRVKDNAAE"
     gene            complement(45600..>45830)
                     /gene="tnpA"
                     /locus_tag="MOX77_000967"
     CDS             complement(45600..>45830)
                     /gene="tnpA"
                     /locus_tag="MOX77_000967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605-like element IS200F family
                     transposase"
                     /protein_id="HCA3356584.1"
                     /translation="FMGYLKGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTA
                     KIQDYIKHQLEEDKMGEQLSIPYPGSPFTGRK"
BASE COUNT        11174 a        12320 c        11303 g        11033 t
ORIGIN      
        1 tgccgctgaa gctgctgtta ctgccggtgt catagcggtt atgaccggcg ctgatgttcc
       61 atgtggtgtc cgggttatgg aaatcgctgt aattcacggt ctgctgcagg ccgccctggt
      121 tatccttctg cacgctgtag ctcacctggc ggctgtcgcc ccacgggata ctgatggtgg
      181 cgtagacctg attctggctg cccccgccgg tgtactggtt acgggcaaac gacaccgagg
      241 ccgagagccc ctgaagctcg ccgagactga acactttgtt gaagctgagc atgtagttat
      301 tgttggactg cgcattccag taattgagcc ggcttaccga gagggccgcg ctcatgttga
      361 gtaccggaac ggactggcta taagtcacgg tgtagctctg tttttcatgc catgcatcgc
      421 cgccgtcggt ggcccgacgc tgcaggtact ccggcatgga cagaaaatgg cggtccgaga
      481 agcggtatcc gacgaacgcc agggtactgc cggttttatc aaacgttttg gcatagttga
      541 tacggtagct gtaaccggac tgcttctgcc cgtgcggcaa ccgcgcatct gagcgggtga
      601 cgtccgcaga cagagcgccc agcagcccca tattctggcc gatcccgagc gccgcggact
      661 ggtagtcgcc ggtggaggca atgaggccgc catacagcga cgtgttgtta aatgctcccc
      721 aggtggcctc cccgagcaga aagtcagggc tggccgtgct gttgttatgc gtaccgccgt
      781 acagcggacg tccggcggcc accttatagc gaacctgtcc ctggcgtgcc ataaagggga
      841 cgctagccgt gttgacctgc caggtccgga cgctgccgtc gctttcccgg acgctgacat
      901 ccaggttgcc gctgatattc tggctcaggt cgggaagctc aaaaggcccc ggtgacaccc
      961 gggtctggta cagaatgcga ccattctggc tgacggtgac ctgtgcatta ctgttcgcaa
     1021 tgccgctaat tttcggggca tacccctgaa gagagggcgg cagcatgcgc tcatcgctgg
     1081 ccaaagtgag cccagcaaag cggaaggagt caaaaatagc ggagctgagg tacgtctgtc
     1141 cgagcgtcag ttttgagcgc agtgctggca gggcacggaa cagatacgtc tgcggcagat
     1201 aaaaatcgga ctgtgatgcg ccctgcccac tgtcaaaacg gctgtactgg taatcgctcc
     1261 gcaaccgcca ggcgccgaga ttaaacccgg cggtgccgta gaggctgtag ctggtagagg
     1321 tttccccctg ctgcggcata tagcggttga ccatcaggct gtaatcaagc aggccagcgg
     1381 tgacgccgtc gctccagcgt gaagggggca cccagtccgg gtcctgataa cgcatccagg
     1441 cctggggaat aatgaaggtc agacgctgat tttcagcgct gtaccgtacc tgactgtcag
     1501 cggagcgcag ctcaaggcat tgcccgtccg ggataccggt aacgggtttc aggccatgaa
     1561 taatcttatc cttaagaccc agcatggcca ccatgtctgt tgtcacacag atgacgaccg
     1621 catcgcgtcc ggcaaccggt acaaccctga ctggatactg ttcccgtacc ggctggtcat
     1681 tgagccagat atcgagaata tagttaccgg gcgccacata cccctcgcgg ctgaaggccg
     1741 tgaggtccac gttagacagg ttcccgctgt ccagcaggct ggcattgaac tccgtggcct
     1801 gcgacttcag gacggaaaat gtcagggtaa tcagaatggc aagccgggta attttcatgg
     1861 catggcgctt tcgtgttgtc gtccgtgtaa cagacagccc gcaggcatgg tcagatataa
     1921 aagccgtccg aacccctccg tggacggctt ctccctgtcg ttatttaccg cgtaaaatca
     1981 caggtatttc agagtgtagg tgacagatgc ggtgaagtca ccgggcgtga cgccattatc
     2041 cagtgctatt agccgggcat agaagttgag ttcgttgttt ccggcctgca gttgctgagc
     2101 gtcgtcctcc ggcatctggg tgttgggctc gataattgcg gtgttgtcac tcttcagtag
     2161 ctggacacca acatgctgtg cgctgccgct ggtggtgtaa gcctttttcg cgacattggc
     2221 tccgccagag aaagagacgg tcactttgga cattttccct gcggagccag ctgtgtccgg
     2281 gatattcgga tcgaaagcac agttctgcag atgaatggtg aacggttttg agtccgtggt
     2341 tgcatcggcg gtattcagtt tacggtaaga aatctgtcca aatggaacgg tgatcgcatc
     2401 gtcgcccggt gcgatatcac agggggagtt ggtgatggta ccagtaaagg taattttacc
     2461 tgagccgaac gggcctgctg ttggtggatc gactgcatat acagaagcgc catacatcat
     2521 accggcagcc gccatggcaa gtattatttt attacgcata gataatatgt cctttgggtg
     2581 aatgagaatt attttgcaaa ggctgaaaac aaatctgagg gtattaatga aagcgttcag
     2641 aaaagattcg catgaataat aaacgccggg tgttaaacga agcacctgaa ctttccatcg
     2701 aaaaatattg atttcagcta atgcctaatc agttgtaaga aaattcttat tcaaattaaa
     2761 acaataaaaa tagatcgata cgatcgatga ttatgatcgt aatttaagaa taatcatcaa
     2821 agaaatactt ttaaatgtaa ttataagcga atgaacacct aacagacaga tattctcagc
     2881 ggacatgaaa tattttgtaa tatgttatcg ggaatgtatg ttttgctttt ccattacaat
     2941 ggatatttac aacacataat actaatcata tataacaatg aaattacttg tagcataaaa
     3001 aaactagata tagcgcaagt agaagggatt taattccaaa gaattaactt aataaatcat
     3061 tatgaaccat cataagcgga agggataaaa aataataaat gaaatgatat tcttctgtat
     3121 ttgtgatgga catcacaata gatataaatg caggtaccct gatattcctg aacttcacgg
     3181 atgaatttta aaaacaatgc cgacagcaaa gaacaaactg gtaatggctg tcagacataa
     3241 tgctgcctgc tgtaatatat acagcaggct gggggatatt aatgcgcggc gtcgtgctgc
     3301 acggggtgcg tgggtgattc ctgaactgac tgagagtcta caactatgcc atcctgagct
     3361 gatttcagta acagacctgc ctgatagtat tttccttcgt tcatcaagga aagcgctgta
     3421 gtcacatcct tacgggtttg ctgaagagga atgagttcct gattttcaat aacactgacg
     3481 cctgctagtt tcagggcctc tatagtccct tttttatctc cttctttcat tttctggttt
     3541 gctttattaa tagcatcatt tttctggccc gcagggagat aatcttcggc taccgtaatc
     3601 gatgaattta tccgaatata gtggtctcct tcaactgggg cttttttatc tgatttgaca
     3661 tacagattcc agtcagtgct gtcatcgttc aggagttttt ctgcttgcgc agccagttgt
     3721 tccgcctttt gggtgcgacc attaaacaac tcgaatcgcg acattccgat atcacgcatg
     3781 gcctgccagg cctgtccgga tatcttgtca ttattcagag taacgttatc agtcatgttt
     3841 gttgcggcca taagatttcc tgaaaacagg ataaccatca gcgcaacgcc tggcataata
     3901 tggcttttca taatccatca tctccacaaa gtaacatttt ttatcggatt atcctattca
     3961 gaaccggtaa cccacgccaa gattaaaacc attgctatta aggcttccgc tgttatgggt
     4021 agcatcaaaa tccgctccct cataacccag agttatagcg acattactga ccggggtata
     4081 agccacgcca gcagaataac catatccgac cttactatca gactcattta tcccgtgatc
     4141 acgctgatgc aataatacgg ggcccacttg actatacaga cttaactggt tatttatttt
     4201 ccatgagggg cctgcaagca gggagtaata acgggttgtt acacgaccat tactgctttc
     4261 atcggaatag cgctggcttc catttagcca ggcaaatgag gttgtcagcc cccagtccgg
     4321 tgacatttca tagttgtttg ccagccgaac cccacgcaac gtcccggcgt gattagtatg
     4381 ggactgggcg tatccaagtg aaaatgtact ggcattatcg tctgcccata ccggactggc
     4441 tgcagcagac agcagaacaa taccggcact tccggctaat agcattttgt tcatcttctt
     4501 ctctccggtt atttttacct gatgccttac tggcatgtat taagttaaaa tctttccgtg
     4561 ataacaaact ataaataaat cttttaaatt atgagcactg ttacgccagc aaataccttt
     4621 atctccggct atcgggaggc tattcacgaa aatatatcca ggccagaaac agtatttaat
     4681 aataaataaa ctgaaaaata aaaactgaca aaaatagaag ttcactgata tataccaaaa
     4741 ataatttgag ttgctgaaag gcggcaaggg agtgagtccc aaggagcata gataactatg
     4801 tgactggggt gagcgacaaa tctgccggga gcagatttga acgtcgcgtg cgacggcccg
     4861 tcagggcgag gcccatggat gggccgagta atccgtagcc aacacataaa caacttgaag
     4921 tatgaagggt atataacggg aaagaagcca tatcggcctg gtaaatcaac gtctgtgatt
     4981 taagttgcag gaaacggcta tggagagggg atgcggcagt tatcgggcag taacggcatt
     5041 gttcagtgag tatccaggaa acaaaaaaag aagggagcgg tactcccttc gtaaccatgt
     5101 cagaatacga cattttggta ctcttttatt tattatctgg ccgtaaaagt tatgctgttg
     5161 gcagatatct ccagtcaaca taaaaaaata ccaccagcta aaaatgtgat gcaaaccacc
     5221 attaagcagg taaccaaatt gactgtgcca ctacaatccg gaaaagagtt tgaatccggg
     5281 gataacatct gatgcagaaa ttagcaccag tcttcgattc ggatacccgg aatgcgttca
     5341 aactcgcgga gattgtttgt gacgacgacc agtccgcggc tacgggcatg gccagcaatc
     5401 atctggtcat aagacccgac aggtgttccc ttgcgggcca gttcggtacg gatttgaccg
     5461 gtatgtatcg ctgcctgtgt atcgtaatcc agaacctcaa ggcgggagat aaatccctcc
     5521 acgactgcaa aattacgctc cggtgccagg cttttttcag caccgtaaat cagctccatt
     5581 aaggtgatgg agctgataca cattcgggat gtattgaggt tgaagcgttc tctgatgtgt
     5641 tcgggcttat ttttgatggt gaaaatacaa gtattggtat caagcatgaa tttcagcatc
     5701 agaatccttc ccgttcctgt actgcgggtt gttctctggt gctcataaaa tcagtactgg
     5761 cgccttcgcc atcgaaccag ctgtcccagg attctccgac tggagtaatg attctgcttc
     5821 taccaaccgc aatgatttcg acatgtttca catcctccgg aaaggatatc gatttaggca
     5881 atctgactgc ctgggtccgg ttactaaaaa aaagtgttgt gtgcataact gccccctttc
     5941 tggatataca acgcgtatat ccattatgag tagaggcgat gtatatgtca aagagatata
     6001 caggaaaaaa taatccagtc acatgacgcg cactccgcag ggcatccttg tccgactccg
     6061 gcatttctga atacatccaa tgaaggaaat accatgcaaa caatgcataa aaaacatatg
     6121 tgcccatggc ttctgcccgg tttgctcggt ctggctcggt gtgcgccagt accgcatact
     6181 tacgcagcca tcattgaggc aggattttat ccggaaggta cagatctcca gcttgttctt
     6241 aagataattg agaccgcgcg acaggaaatc cgtctgatgg actattcctt cacctcttgg
     6301 gaggtggtcc ggttcgaaca ttcagtgagt acaaaattct ccatgtcaaa gtgatcgtca
     6361 gcgacgaccg ccacaccgag gtggacgcgt cagaatcgct gatcggacac gtcgcaatct
     6421 acactctgac ttataagcca gcctgaaggg gcatgttggc tttgacgatc aggcaaaaaa
     6481 caacggcgaa taaagtcgta tgatgatctt cacatttatc atcatcagcg ttcatattac
     6541 tcaacctgta atcaacctct ggcgtttttc tgtatccatc acaaccattt ccggtaaagg
     6601 taaaaaaggg atttgaacct ttccggagat gataatgaag gtaaatgcat ggacaatttt
     6661 gcttatgtcg gcgcatctga cggcctgtgc cgtccctggc acagaaaaat atcagaccag
     6721 catggacagc gttacggcag aaaaaataag ccggattatc cagtcggatg tcattcctta
     6781 taaaggcgaa aaccatggag aagttatcag ccgcgtatcg tctgcttttc tcggaacacc
     6841 ttatcaggcg gatacgctca tcggtgggcc cggcatcccc gaagtccttg tagcgaattt
     6901 caacggcgtg gactgcttta ccctggctga ttacgttgaa gccctggccc gcagcgataa
     6961 tcagaaatcg tttctgcata atcttgccag gactcgctac gccgcgggca aagttgctta
     7021 tctcagccgc cggcacttct tctctgactg gttcgccgca gcaccgcgta atgcacggga
     7081 tgtaacgccg gatatcagcc ctgattatgt cgttgttgac aagcagctta accataaacc
     7141 tgatggcggc gagtacattc ctggtctggg catccatcct cgtaaaataa attacattcc
     7201 cggaagagcc atcaaccagc aggtcatgaa ccacctaaaa aacggggatt atatcggtgt
     7261 ctactccccg cttgacgggc tggacgtttc acatgtgggt atcgtagttc gccatgatga
     7321 acaggtgtgg ttcaggaacg cctcctcatt ggccgcaaac agaaaagtgg tggacacacc
     7381 gtttatggaa tacatgcatt ccagactggg catcgttgtg ctgcgggctg aatgataaag
     7441 tcattaccgg agtcgccagc tgataatagc cgtccgacat aggtattgaa accctgtgta
     7501 ctgtggggcc gacacggaaa attgctgtaa attcgtggat ttagtaaata ctagaagata
     7561 tttgtctgga gcgggcgaag ggaatcgagg tatcgaagat aatcagccgc taaccatttg
     7621 cttcctaaag gatgatgaat ccttgtggtt acagttatgg ttacacatta atttatctct
     7681 ggtcaagtcc tctcgtgact ctggtcaagt cctctcgtga ctctggaacg agtaaccgaa
     7741 gtcctaactt taagacagtg gccccaatcg tccagacttg aaaggggcca aggggggaga
     7801 ggcaccgacc tttgtctatt agatacctac agagattttt gtgagatttt ttaatacaag
     7861 gtcataacct accgccacca gcccccaccg accgcaaagt gaagacctgt aagcaccaga
     7921 gcaatagcta ttgcgggcat actgctgatt gttattatct atcactccct gtagagcatc
     7981 tggcagacca agtggacaca gaggacgagc tcaaacaact cctgtaagct catggatgta
     8041 ctccttatgt tcactcaggg tttatagtta ctctggggta gtaaaccgaa taacatgtat
     8101 caacgggaaa gaggcgtctt tctcaacgtc aaactcacct gctttcacct taacggaacc
     8161 agtagccaac acatcgacca cactgattaa ctcaaggtca tacccagcag tgttactatt
     8221 tcgggtcact ttgacatcta ccgtcttagc gtctttagtt gacctgaaag agatagaagc
     8281 gaaccgctta ggcaggagat agacacctgt atcatcgccc gcatagctgc atacagtgca
     8341 gcccaatagc tcactaatat cctcatgacc tgcgcgttga gcggctcggt ccaagattgc
     8401 ctcaagtctc tcagggacca atacagcgta atcgctcagt gtatttccca actcgaccgg
     8461 aagattcaac gctaatgtat ccagaagatc ttcagcttga tcagacggtt taccacttag
     8521 tggggctgcc tcaatgattt gaaggtctgg cgtatctttc aggacatcga ccacagcggc
     8581 gaacatctgg cggctgtatt gaacctgcat atcacctaca gtctggatta atgccccctc
     8641 ggtccaaccg cccatcatat cgaagtcaga tacatgagta gcagcagaac acaggatgcc
     8701 cgtcttattg gtctcagggt tcaacactgg ggtgacagtt acgcttgccc ctttgatggc
     8761 tgtggtagac ggagcatcct tagctggatt aaacgcgcca ttatgcttaa agcggacggt
     8821 gcgattctgg agagcctgac ggcgaatagg cgtagggtca gtgccgtatg ggcgaaactc
     8881 acaagggaag acattctcca ttacagcagt gcggaagtct ccatcattga aggtctcatc
     8941 caaagagtcc tccagcgcct gaacaaaatc atgtgaatca ttcccgaagg ccatcggacg
     9001 gcctgagcgg tccgtaaagc ctacgttgag aacttgggcg tcttgaccat tggtcatctg
     9061 aacatagtca gtgcgtgaga tgtcagtgcc ccatatagac cccttaatga tttgaccgtc
     9121 tttatctcgc tgaggctgac gcagagaagc cagtgaggat gctttgttaa tttgatttgt
     9181 aatagacacg atgaatatct ccttattgta tgaatgcact acgtaaaaag taactggtga
     9241 caccattggt cttatctcag aatccaagca gcgccaccga aagttatcag ttacagcccg
     9301 aaagcggccc ctttattgcc gaagcgttta atcaatgctt cctctcgggc tttacgttca
     9361 gcgaccgcct tagcaatctc ttctggtgtc gcatgaatag cagccatacg ttcttgatgt
     9421 gccttagctt ctttacgtcg gcgttcagcc tcttggcgct cctgtgcgtt gctttgagcc
     9481 caccagcggg aatacttgcc gtaatcacct gcatcaagac cagcggcgtg aatatcgtta
     9541 agaatacgat ttgagttcgc catgtcagag cctgtactgt tcagcatggt tgtaacgaca
     9601 atttcggtga aatacttagt ggatagctcc tgaccgaata ccagtacagt ttctttgtca
     9661 gcgctcagtg cgatatccag tttgcgataa gaaatagaca tgtttgtttc tcctttgaaa
     9721 agatgtttta aaaggattaa actcatcggt cttccatagg tattcctacg gcgtctcccc
     9781 gtatcttggt cagttcaaaa ggtggtgcta gctgtgctag tgggttaatt acatgaaatc
     9841 tcttggggtc agccctgcgt caaccgccat gagacagagg gcagctttag agtaatacgg
     9901 gcggttttcc ttggcaggca gacccagagt agctatcagt gccttggggg gtaccaccat
     9961 caggcgtaac gccttacggc cttctggtgt ccttgggtca atcttgattg tgtcatttgt
    10021 gttattagtc atgaattacc tcccctccag ctttgctact gcctgtatgt gttgctgttt
    10081 agcagcgtcg cttccatgaa ccgctatgac ctttctgtgc atcttgagta cgttttcagg
    10141 tcggctgaag aactccagcc ccttagcgtt aaaccgaatg tttataccgt ttgggttgaa
    10201 tcgatggtca gtaggtttga taattcgaaa gtactccaca tagtttggat tgactgacca
    10261 ctcgccactg cttgaatgta ctcggaacag cttgcgctct ttcttaagga tggtcatcag
    10321 tttctgagcg ggtagaccat tggccttgca gtaatcgccc caagtcacgc ctcgacgatt
    10381 agctgactga atggctgctc gtttcttctg gtcttccagt tgaagaactc gacgttctaa
    10441 cgtctgaata tggtcgtaac acttggcgcg taggtgaaca gaatagccag cgaccagaat
    10501 aaaagtatgc ttacggtcga gacggtacag aggctgctgt ttcccctgcg catttagata
    10561 gacatcttca atcaccccta taggactgct cagttttgag cagtgctcag ttttgagtgc
    10621 gttaagctcc tcaaccatat tgcgaatatc acgaaggaca tttcggtgct ccttgcctgt
    10681 cagctcagca atttcaactg aggtcatgga cacaagctgg tcgaggttaa tgatgctgat
    10741 ttcttgttga gacatagctt gatttccttt ttgtttgcac cctgaagtcg cacccccact
    10801 gacctactca aagtccccaa gcgaagggag accagcagga caacaggatg caaacagaat
    10861 gactttgaga ttgaatgaat gaatgacgat gattgtgtcg tagctgtgcg gagctactgt
    10921 atggtgaagc gcgagaggtg gaactttgag agacacgtgg tgagtggttc ggagtgtgtc
    10981 tcctattagt aagtcgtatt gattcgtatt gattcgtatt gatttactac tgggagggtc
    11041 tctcaagggt ctctgagcca cgctaggcat caggccatac gaaactacat ggcatcctaa
    11101 agaatggagt acaggaccat acagggccat acagttagct tctggggtaa tgccttgagg
    11161 agacctatag gtttggtgat tgattgttat aaatatcatc acctcttaag gtattccctt
    11221 agagttaatc tttaattgtg tctttaagta aactataagt taatactata agttaatctt
    11281 taattgtgtc tttaagttaa ctttaagtta agcccctgta gggtagagac catatttaat
    11341 atgatgtcta ttgctattca cttatcgact gacccagagc acacaggaag cattcacttt
    11401 aagtagaacg cttggtgtct gtaattggtc atcccgcccc tgaaaggatg cgataagtta
    11461 cggttagagt tagagttaga gctacctgta gtagtagtag caagtgtccc agaagagaga
    11521 gaaagagaga aaactttttg tgtcccttct ccctatagtg agtcgtatta gaaatccttg
    11581 acaagtagtg aaaactgtga gtcaaaaaca tgaccacaca ggcctgtagc aatatggtca
    11641 tcgactatgg tcagcctcaa ggcaaatctc cccggggggg gacagcttgg ttaccccaca
    11701 atctccttat aaacatcagc catcacattg accagcctat caacctcaac ctctttagca
    11761 taacggtcgt aagtaataga ccctgaacta tgccccatga tcgcctgtgc atacgccaac
    11821 tcgaccccat gttgttttaa ctgggtcgca actgtatgtc taaacgagtg aaacgctaag
    11881 ccgctacgat ctgcgaggac tttaggcaac aacgtccgat taaaccattt actcacctgc
    11941 tcaccgtaac cgttcttcat gaggcgaaga ccatcgaaca ccatagcgtc atcaccatca
    12001 gcgcctctac gggtctcaac caacctcata aagtcagcca atataaaacc ataggcccca
    12061 tcgaccagag gcacacagcg gtcactatga gcgttcttga tgctcttacc gggtagacta
    12121 ctatcgtctt cattgatatg aatataaacg gttcccgcct cagtggtcct gacgtctttg
    12181 acctgtagtt gggctatttc attgagtctc gccccagtga tagcagccaa ggcggtaaca
    12241 taataatgat acggcttacc agaaggtctc tgtgagtaaa cttgggcggc agccagtagt
    12301 tgtcctacct gctccgtaga gaaagcatta cgcgcctcag aggctttacg ctggggaacc
    12361 ttaagctcta gcccttctgt catattcttt ttaatcaggt cattacgcac ggcccacttg
    12421 aaaacagccg ccatcttaat gagatattta ttattgatgg taacaatatc cagacaatcg
    12481 gttttatcct cacgacctag caggtcaacc aacggaacat ctttgaaacg ctgcttacga
    12541 ttcttcggca attgctggag gatatcccga accctaagca tatccgcacg agctaacaca
    12601 ttggcgtcag cattgaggcc cagataatca aaaacctcga ttaacgcagc atgagaagct
    12661 ttgttttctc gtaatgttgc tggcttccag ttctgggcgt tttcctgctc gtactgctca
    12721 aagagagaag caacggttac gcagtgtttg ccttcagtaa tgcttgtttt ttggggagca
    12781 ctaacagata gagttgcaga ggcttggtca ttagcaccag cagcagcatc aaatccatct
    12841 atataatcta taagtggctg gctatctccc gcttcaatgc gcttcatgca ggccttgagt
    12901 acattaagag cctcattaat atagcgatgc tggtcaatag tcagtggctc gctatggaca
    12961 agattctctc ccacttcccc atactggtca cggtatagat ctctcatatc tggctcgaag
    13021 aggtctgaac gacctgtaga caactcccac tctgcgatgt ccctcaggtg ttccctcatt
    13081 tcctcatagg aggcgttggg tctgtctgca tggattgccc taagtgctgc cttgatatgc
    13141 cgtgagtaag ccatagctgt acgtctatcc ttagtccgta gtgatactga cgctatttta
    13201 taacggctat gggaaggatg tgaaacggtc aggcgatctg tggacttcat cctgaggcgg
    13261 atataaaaga cgccattgcg ctgataaaga taggtttttg agttgagcat gtactgagat
    13321 cttaagtctg ctcactattt caacaaattt agttacagtg ttggttacag tgagtaaaac
    13381 tagcggaagg cttaaagccg tatcccttag gattcagtag gttggagtac tttaagaaag
    13441 gtcatggagc gggcgaaggg aatcgaaccc tcgtatagag cttgggaagc tctcgttcta
    13501 ccattgaact acgcccgctt tgagatgcgt aaggcattat aaaccttacg ctctggttgg
    13561 caagagactt actggctgac tggcgattaa ttcgccgtca gcacttcggt ttactcccct
    13621 gcggcggcag ataacgcagc ggatcgatgg ccgtcgcccg gtagcgaatc tggaagtgta
    13681 gtcttacgga tgcggcatcc gtgctgccca tcgtagcgat tttttgcccc gctttaacgc
    13741 tttgtccatt attaaccagc atggtgtcat tatgagcgta agccgtaatg taatcttcat
    13801 tgtgcttaat catgatgaga ttgccgtaac cgcgcagctg gttcccgaca tagacaactt
    13861 tacccgctcc cgccgcataa acaggcgttc cgcgcgcgcc cgcaatatcg atccccttat
    13921 ttccgccctc cgcggtggaa taaggtaaaa tcactttacc gttagcaggc catacccaac
    13981 aacgctgccc caccggcggc caggaggatt ttggcaccga agatgacggt ctgaccgcag
    14041 cagtttttgt tgctgtttta ttgctggttt tgcgtgttga actgctactc tttgcgctgc
    14101 cgcgcacttt aattcgctgc cccacctcaa tagtataagg cggagaaatg ccattcagtc
    14161 gggccagttc tttcacgctg gttcccgtag cgcgcgatat acgatacaac gtatcgccgc
    14221 gcttaacggt atagacggag ccggaatacg ttcctgagcc ggaattactg gaacaccccg
    14281 ccagcagcag ccctgtgcat aacagcaccg caatacccag gctatttttg ttcaggcgtc
    14341 ctgcgctcaa aaccattcct cactctattg acagacgcct tatgatagca gccaaatgcc
    14401 gtatgcccaa tccattgacg ccggaaaggg tccgtgtgga tgatgatgcc gcgaatatcc
    14461 gatatgccag cataatatcg aatcacggca caatagcgct cgtctgcgtt ctgtcagggc
    14521 ctgttttggt aatgcctttc tttctgttat gcgctacgct gatcgtctga gtatatggcc
    14581 tggccatgct gccgggtcat tttaattttc aggagctttc atgactgagg aacatgtcgt
    14641 tttattggat gagcaggata agccttccgg cacactggaa aagtatgcgg ctcatacgct
    14701 taatacgcct ttgcatctgg ctttctcctg ctggctattt aacgaagatg gccaattgct
    14761 ggtaacacga cggtcgctga gcaagaaagc ctggccaggc gtgtggacga attcggtttg
    14821 cggtcatccg caacaaggcg aaaccaccga agaggcgatc atccgccgtt gtcggttcga
    14881 actcggcgtg gaaattaccg atctcacccc cgtctatccg cacttcagct atcgggcgac
    14941 agatccaaac ggtattgtgg aaaatgaagt ctgtccggta tttgccgcgc gggcaaccag
    15001 tgtgttacag gttaacagcg aagaggtgat ggactatcag tggagcgaat ttaaaagcgt
    15061 atggcaaagc cttctcgcta cgccgtgggc atttagcccg tggatggtca tgcaagcgtc
    15121 agacgaacaa gcgcgtaaac gactgctcaa ttactgccag cgttaaagat tgcctgatgg
    15181 cgctacgtct gaacgaagag atgccggatg gcggctaatg ccccatccgg caatttacat
    15241 cttatttcac cggacgcatc gccgggaaca gaataacgtc gcgaatcgtg tggctgttag
    15301 taaacagcat caccatacgg tcgataccaa ttcccagacc cgctgtcggc ggtaaaccgt
    15361 gttccagcgc cgtcacgtag tcttcgtcgt agaacatggc ttcgtcgtcg cccgccgctt
    15421 ttgcattaac ctgatccagg aaacgctgcg cctggtcttc cgcatcgttc aactcgctaa
    15481 agccattgcc gatttcacga ccgccgataa agaactcgaa gcggtcagtg atttccgggt
    15541 tcacatcatt acgacgcgcc agcggagaca cttcagccgg atattcggtg atgaaggtcg
    15601 gctgaatcag atgcgcttca gcgacttcgt caaagatctc ggtgacgata cggcccagac
    15661 cccagctctt ctcgacgtga atgccgatgc tttcagcaat cgccttcgcg gagtcgaagt
    15721 tgtccagatc agccatatcc gtttccggac gatatttctt gatcgcttca tgcatggtca
    15781 gtttttcgaa cggcttaccg aagtcaaaca cttcatcacc gtatggaacc tgggtggtgc
    15841 ccagaacatc ctgcgccagc gtacggaaca gagactcagt cagctcgatc aggtctttgt
    15901 agtccgcata cgccatatag agttccatca tggtgaactc aggattatgg cgcacggaga
    15961 tgccttcgtt acggaagtta cggttaattt cgaatacgcg ttcgaagccg ccaaccacca
    16021 gacgcttcag gtacagttct ggcgcgatac gcaggtacat gtccagatcc agcgcgttgt
    16081 gatgggtgat aaacggacgg gcagacgcgc cgcctgggat cacctgcatc atcggcgttt
    16141 cgacttccat aaagccgcga gcaaccataa actggcgaat accggccagg atcttcgaac
    16201 gggttttgaa ggtattacgg gattcatcgt tagagatgag atccagataa cgctggcgat
    16261 agcgcgcttc ctggtcctgc aggccgtgga atttatccgg caacggacgc agcgctttcg
    16321 tcagcaggcg cagttcggtg cagtggatag acagctcgcc ggttttggtt ttgaacagct
    16381 tacctttcgc gccgaggata tcgccaagat cccacttctt gaactgctcg ttgtaaacgc
    16441 cttccggcag atcatcgcgc gccacataca gctgaatgcg gccgcctacg tcttgcaggg
    16501 taacaaaaga ggctttaccc ataatacggc gagtcatcat acggcccgcg acggacactt
    16561 caatattcag cgcttccagt tcttcagctt ctttcgcgtc aaactctgcg tgcagttggt
    16621 ctgaggtacg gtcacgacgg aaatcgttcg ggaacgggat accctgctca cgcagtgcag
    16681 ccagcttctc gcgacgtgcc ttcatttcat tgttaagatc gactacctcg tcagcgccct
    16741 gtgcgttttg ttcagacatg ttgattcctc atagccctgc tttcaaactt gcttcgataa
    16801 attgatccag actaccgtcc agtaccgcct gtgtattgcg ggtttccacc ccagtacgca
    16861 ggtctttaat gcgggaatcg tccaggacat aggaacgaat ctggcttccc cagccgatat
    16921 cagacttagt gtcttccatc gcctgttttt cagcgttctt tttctgcatc tccagttcat
    16981 aaagcttcgc tttcatctgc ttcatggcct ggtctttgtt tttgtgctgc gaacggtcgt
    17041 tctggcactg cgtcacgatc ccggtgggaa tatgggtgat acgcactgcg gattccgtac
    17101 ggttaacgtg ctgaccgcct gcgccagacg cgcgatagac gtcgatacgc agatccgccg
    17161 ggttaatgtc gatatcgata tcgtcgtcca cttccggata cacaaacgcg gagctaaacg
    17221 aggtatgacg gcgaccgccg gagtcgaacg ggcttttacg caccagacga tgtacgccgg
    17281 tttcagtgcg cagccagcca taggcatatt cgccggagat tttgatagtc gcggacttaa
    17341 tgccggcgac ttccccttcc gactcttcaa tgacttccgt cttgaagccg cgcgcttccg
    17401 cccaacgcag atacatacgc agcaacatgc tggcccagtc ctgtgcttca gtaccaccgg
    17461 aaccggcctg aatatcgaga tagcaatcgg cgctatcgta ctcgccggag aacatccggc
    17521 ggaattccaa ctgcgccagc ttctcttcca gcgtattcag ttccgcgacg gcttcgttaa
    17581 acgtctcttc gtcgtcagct tctaccgcta gttccagcag cccggaaacg tcgtccagcc
    17641 cctgagtcat ttgatcaagc gtatcgacaa tcgcttcgag cgatgaacgt tcttttccca
    17701 gcgcctgcgc gcgctcaggt tcgttccaga catccggctg ttccagctcg gcgtttactt
    17761 cttccagacg ctctttctta gcatcgtagt caaagatacc ccctaagaac gttggtgcgt
    17821 tccgtgaggt cctgaatgcg gttattcacc gggttaattt caaacatggt ctgatttctt
    17881 ttatttgact tgtcaaaatg cggttataag ggtgaaatat tagcggattt cgccccttaa
    17941 ttacagcgaa agtgttgtta aatcgccccg atcatagcgg ccaaatatca tcgataataa
    18001 tctgtaaact acggttgccg cgaaactcgt taatgtccag tttataagcc agttctacct
    18061 cccgcacgcc gttatccggc caacaggtcg tatcaatatt aaatgcgatg ccatccaaca
    18121 gcgggccgcc gccgacaggc tccaccatca ccttgaggtg gcgctcgccc accagacgct
    18181 gttgtagcag acggaaacga ccatcgaata acggttccgg gaacatttgc ccccacggtc
    18241 cggcatcccg caacagttgc gccacttcca tagacatctc cgccgcgctt aatggaccat
    18301 cggagatcac ctcgccttgc aacagggcag gatcgagcca ttccgtcacc agctcgccaa
    18361 aacgttgctg aaactgctcg aatttatgct cttccagcga caatcccgcc gccatcgcat
    18421 gaccgccgaa cttgatcatc agatcagggt aaagcgtatc cagcctttcc agcgcatcgc
    18481 gcatatgcaa cccctgaatc gaacggcctg agccttttag cgtgccgtcg cccgcaggtg
    18541 caaaggcgat caccgggcgg tgaaaacgct ctttaatgcg cgacgccaga attccgacca
    18601 cgccctgatg ccattcagga tgatacatcg ccagaccgcc cggaagcgtt tcactactgc
    18661 gctcaagctt ttcgcacagg ataagcgctt ccgcctgcat cccctgctct atttctttgc
    18721 gcgtctggtt aagcgcatcc agctcgctgg ccagaacacg cgcttcgccg aggttgtcgc
    18781 acaacagtaa cgccacgcca acggacatat catccagcct gccggcggca ttcagacgag
    18841 gccccaacgc gaagcctaaa tcactggcgg caagctgctg cggatcgcga ttcgatatct
    18901 ccagcaacgc tttaattccc ggacggcatt tcccggcacg aatacgactt agcccttgcc
    18961 aggtcagaat acggttgttg gcgtccagcg gcacaacgtc tgctaccgtt cccaacgcca
    19021 ctaaatccag cagctccgcc agattcggcg gcgcgatgcc gcgctcgtcg aaccatcctt
    19081 tgtcgcgcaa aaatgttcgc aacgccagca tcaggtaaaa cgccacgccg acgcccgcca
    19141 gcgacttaga cgggaattcg cagtcgcgca gattgggatt aataatcgct tcggcatccg
    19201 gcaacgtgtc gccaggcagg tggtgatcgg tcacgatcac cggaatcctc aacgtctttg
    19261 catgcgctac gccagcgtgg gatgaaatgc cgttgtctac ggtgacgata agctgtgcgc
    19321 cgcgcgcctt cgcctgatcg accacttccg ggcttaaacc gtagccgtcc tcaaagcgat
    19381 taggcaccag ataactgatg ttgtcacatc ccaacgcacg cattcccaat acgcttagcg
    19441 cagtactggt cgcgccgtcg gcgtcaaaat cgccaacaac aataatgcgg gtaccttcgc
    19501 gaaaggcgtt gtagaggatc tccaccgcgt tatctatgcc gctaagctgt tgccagggca
    19561 gcattccttt cacgctgcgc tccagttcgc gggcgctacg aacgccccgg ctggcatata
    19621 gacgtcgtag taatggagga agatcggcgg ggagttccgc cgtctcatca gcctcgcgcc
    19681 gacgaagttg tctctgttgt ttcacgcgta ttatttacca ctggtctgtt tttgatgctc
    19741 atcaagaaac gctttcatct ctttcggtcc ctgatagcca ggcaccacat agccgttact
    19801 caatacaatg gctggcgtac cgctaacgcc caactgcacg cccaacgcat aatgatcagc
    19861 aatgttcacg tcacagcttg ccggtttcac gcccttacct gccatggcgt catcaaacgc
    19921 tttgtttttg tctttggcgc accagataga tttcatatcc tgctccgcct ggctttccag
    19981 cccctggcgc ggaaaagcca gataacgtac cgtgatcccc agcgcgttat aatctttcat
    20041 ctcttcatgt agcttatgac aatagccgca ggtgatatcg gtaaaaacag taatgacatg
    20101 tttctcatcc ggcgctttat agacgatcat ctctttttcc agcgcattta gctggctcat
    20161 cagcagtttg ttcgtcacat ttaccggatg cgcgccgctc acgtcataca tcggcccttg
    20221 aataatatgt ttgccgtcgt cagtgacgta cagtacgccg ctgtgagtga ggacggtttt
    20281 catccctgcc actggcgagg cctgaatttc cgtactctga acgcccagct tagccagcga
    20341 ctgacggata gccgcatcat ccgcatgggc cacgcctgaa aacgccgccg ccagtaaagt
    20401 gaacatcata aaacgctttt tcataaacta tcctttcctg tcagcactca tgcccgcgga
    20461 tggtgctgtt gatgaagttg acgcaaacgc tccgttgcga catgcgtata aatttgtgtc
    20521 gtcgaaagat cgctatgccc aagtagcatt tgtacaacgc gcaagtcggc gccgtgattc
    20581 agcaaatgcg tggcgaaagc gtgacgtaaa acatgcggcg atagtttttc gctatcaatt
    20641 ccagccagta ccgcataatg tttaatacgg tgccagaagg tctgtcgcgt catctgctgc
    20701 gcacgctgac tggggaataa tacgtcaatc gatacgccat tgagtaacca gggacgccca
    20761 tgctccagat acgtttccag ccaatatacc gcctcttcgc ctaacggcac caaccgctct
    20821 ttattgcctt taccgataac ccgcaccacg ccctgccgca gactgatatc gctcattgtc
    20881 agccccacca gttccgacac gcgcaaaccg gtggcataca gcacttccaa catagcttta
    20941 tcgcgcaact ccaaaggttg atcaataagc ggcgcctgca agagccgttc aacctgcgcc
    21001 tcgctaaggt ctttcggtaa acgctgcgga agcttaggcg aggccaactg tgcgctcgga
    21061 tcatcctcac gatacttttc acggtacaga tgctggaaaa agcgccgcat agcgcttaac
    21121 aggcgtgcgg agctggtcgc tttgtatccg ccctccaccc gttcagccaa tagcgtttgt
    21181 aaatcatcag cctgcgccgt cgcaagcgtt tttccgcgat gatgcaacca cgcaacgacc
    21241 atcgataaat cgcgacgata cgcgcttaat gtattttccg ccagatttcg ttccagccac
    21301 agggcatcca gaaactgctc aatacgcgct aaatcctgtt ccattcgcgc tccctacttc
    21361 acgcttactt ttggtgcatt atgcctcatt gtgccgtgaa tgcagcgatt ctgttacact
    21421 acccgcaacg ctatagcaga atcgagatgt aacgtaatga acatgggtct tttttacggt
    21481 tccagcacgt gctacaccga gatggccgca gagaaaattc gcgatatcct cggcccggag
    21541 ctggtgacat tacataacct caaggatgac gcccccgcct taatggagca gtacgacgtg
    21601 ctcattttag gcatccccac ctgggatttt ggcgaaattc aggaggactg ggaagccgtc
    21661 tgggagcaac tggacgatct caatctggaa ggcaaaatcg ttgcgcttta cggtatgggc
    21721 gaccaactcg gctacggcga gtggttcctg gatgcgctgg gtatgttgca tgacaaactt
    21781 gccctcaaag gcgttaaatt tgtcggctac tggcccacag aaggctacga atttaccagc
    21841 aataaaccgg tcattgcgga tgggcaactg tttgtcggcc tggcgctgga tgaaacgaac
    21901 cagtacgatc tcagcgatga gcgtatacag acctggtgtg aacaaattct cggcgaaatg
    21961 gccgaacact acgcctgaag ccttactcgc tgtatttccc tctcgacgga accgcgtttg
    22021 cgtcgttccg tcagtgttgg cgctatatcg gctgctgtaa cagtatccga cgcaactcac
    22081 gccattccgc ttcttccatg ctatccgccg ccagccataa atgctgatga cgtccagact
    22141 ctgcgcgtaa acgcaacacc atcccgctct tcagtaacca gggaggacgc aagagcgtcc
    22201 agtcctgtcc ctgccagcgt aagcgcccgt ccatgagtag cttgatctct ccctggcagg
    22261 tattaatcct gcgctggcta cgtacacagt caaacacgac cagcgacagt agtatcatcc
    22321 ataacggggt ataactcagc ggccagggca tcaataaaat caccgcggca accagcccat
    22381 gaaggagcaa tgagatccac tgagcgcgcc atgagacgcg taaatcagat tgccacagga
    22441 ccacgttccc gattccgtgt ctgaatgagt cggaccatct gttccagttc agcgtcagcc
    22501 ggtttaccgt gattcattaa ccagttaaat aaatccgggt catcactctg caacaaacgg
    22561 acaaaaatac gcttttcttc atcacttaaa ctatcgtact catgttcaaa aaacggcatg
    22621 atggaaatat caagttcgcg cataccgcga cgacatgccc agtgaatacg tgctttattg
    22681 tgaatatcca tgttcttcct gcctcgcgaa aatgaagtac cgggctattg taacgtgttt
    22741 ttggcgttgt tttacgggaa tctcagtaat ctggaacgcg atcgcgaaat agaaggctgg
    22801 gaatcaatat gttcatccgt tttggatacc acctcgcaaa acgatcaatc cgctttcaat
    22861 gggctattta aagcacttgc aatgaccgat ggctctttta ccattaacca ttattgttgc
    22921 agctaaccag gacattattt atggctttta tctcctttcc accacgtcat ccctcatcgt
    22981 cagcccgcct gccgctgacg ctgatcgcgc ttgacgactg ggcgctgtcg tccattaccg
    23041 gcgtagacag tgaaaagtat attcagggcc aggtcaccgc tgacgtaagc cagatgactg
    23101 aacagcaaca ccttctcgcc gcccactgcg atgctaaagg taagatgtgg agcactctgc
    23161 gactgttccg tgagcgcgac ggtttcgcct ggattgaacg ccgtagcgtg cgtgaagcgc
    23221 aattaacgga gctgaaaaag tacgccgtat tttccaaagt agtcatcgcg ccggatgacg
    23281 aacgcgtatt gcttggcgtg gccggttttc aggcccgcgc ggcgctggct aatgtcttta
    23341 gcgaactgcc caatagtgaa aatcaggtgg tcagagacgg cgcctccacg ctgctatggt
    23401 ttgaacatcc tgcggaacga ttcctgcttg tcaccgatgt cgcgacggcc aacatgttaa
    23461 cggagaagtt gcatggcgaa gccgaactga ataacagtca acagtggctg gcgttggata
    23521 ttgaagcagg cattccggtg attgacgcgg cgaacagcgg tcagtttatc ccccaggcga
    23581 ctaacctaca ggcgctgggc ggcatcagct tcaagaaagg ctgctacacc ggacaggaga
    23641 tggtcgcacg ggcaaaattc cgcggcgcca ataaacgcgc gctttggttg ctggcgggca
    23701 aagccagccg ggtaccggaa gcaggagaag atctggagct acagatgggc gagaactggc
    23761 gtcgtaccgg cgctattctg gcggcgacac agttggacga tggtcagtta ctggttcagg
    23821 ccgtcatgaa taacgattta gaagccgaaa gcgtcttccg cgttcgcgac gatgccaaca
    23881 ccctgcatat cgtcccgctg ccttactcgt tggaagagtg atatcacgtt aaaagtcgga
    23941 tagcctgata gcgcaacgcc atcaggctcg cacgtgctgc tctcgtaggc cggataaggt
    24001 acgacagcgc cgccatccgg cacgggcatc cgggaattac gcctgtccca catacaaata
    24061 gatggccagg aagtggcaca cgctgccgcc cagcacaaag ccatgccaga tggcgtggtt
    24121 ataaggtatg cgtttgcaaa catagaaaat tacgcccagc gagtaaacga cgccacctac
    24181 cgccagcagc gtcacgccgc ctatcgccag cttaatcgcc aactgataaa ccactatcag
    24241 cgacagccag cccattgcca gatacgtaac cagtgaaagc actttaaatc ggtgcgcaat
    24301 cgtcaacttg aagaggatac cgaatagcgc caggctccag atcacaatca ttagtccgcg
    24361 cgccagcggc gaatccagac ctaccagcag aaatggcgta taggttccgg caatgagcag
    24421 atagatagcg cagtgatcaa atttctttaa ccagattttt gcccgctgat gaggaatggc
    24481 atgataaagc gttgaggcaa gaaaaagcag gatcatgctc ccgccatata aactgtagct
    24541 ggcgatagcc gtcatacccg cattcgcctc taccgcctga accaacaaca gcaccaggcc
    24601 gacaatacca aataccaatc caatgccgtg gctaatactg ttggcgattt cctcagccag
    24661 cgaatatccc tgcgtcatta atggtttttg caccataact tactccggag aaacgttcat
    24721 aacgatgaac tgcacctcta gcgtaactga gaatggttcc agtgaacaca tgttagctaa
    24781 aataaattcg caaaattaaa ttttgtttat tattcaacaa attaactaca aaaactcaac
    24841 taacacgcgt tcatatttat caaaggcatt taaaatcaat cacataaaat tgcgtctggt
    24901 tgggatagat ttcagcaatg acccgtttca gctcatcaag cgacatattt tcctgttgcg
    24961 catgtttttc gttcaacgta tccagcgtca cagttgacgt tcctgtcact tcgattgtgc
    25021 aaaaatagcc atcatcttcg aaccgcccca cgcgtagagc atcgcctgct ttaaagtggg
    25081 actcggaggc atcacgaata gtgatggttt tacgccctgc cagaatgtca ttctggaaac
    25141 gttgaaagaa agtaatgtca tttggctgca tgtggttatc cccctgaata tggccccttg
    25201 aagtggatgt tacgatctga atgtgttctt gccccgacac gcgagcatcc tggaattttg
    25261 cgtacgcttt acatgccact tggtgcagaa tgaatgataa cagactaaat aaattgagat
    25321 tatgcaacaa tgagaaaact caccctgcca aaagattttt tatggggcgg cgcggttgcc
    25381 gcacaccagg ttgaaggcgg ctggaataaa gacggtaaag gccccagcat ctgcgacgtg
    25441 ctaaccagcg gcgcacacgg cgtgccacgc gaaatcaccc agaatgtcgt tgctggcaaa
    25501 tactatccga accacgaggc ggtggatttt tacggacatt acaaagaaga catccgtctt
    25561 ttcgccgaaa tggggttcaa atgcttccgt acttctattg cctggacgcg tatcttcccg
    25621 aatggcgacg aatcccagcc aaacgaggcc ggtctgaaat tctacgacga catgtttgat
    25681 gagttactca aatacaacat cgaaccggtc atcacccttt ctcactttga aatgccatta
    25741 catctggtac agcactacgg cggctggacc aatcgtaaag tggttgattt ctttgtccgt
    25801 tttgctgaag tcgtgtttga acgctacaaa cataaggtca aatactggat gaccttcaac
    25861 gaaattaaca accagcgaaa ctggcgcgcg ccgctgtttg gctactgctg ttccggcgtg
    25921 gtgtataccg agcatgagaa tccagaagaa accatgtatc aggtcttaca tcatcagttt
    25981 gtcgccagca cgctggcggt aaaagcggca cgtcgtatta atccacagat gaaagttggc
    26041 tgtatgctgg cgatggtcgc gctgtatcct ttctcctgta aaccagaaga tgtgatgttt
    26101 gctcaggaat cgatgcgtga acgctacgtc tttaccgatg tgcagctgcg cggctattac
    26161 ccgtcctatg tgttgaacga gtgggagcgc cgcggattta acatcaaaat ggaagatggc
    26221 gatcttgaag tgctgcgcga aggcacctgc gattatcttg gtttcagtta ttacatgacc
    26281 aacgcggtca aagccgaagg cggtagcggc gatgcgattt ccggttttga aggcagcgta
    26341 ccgaacccct atgttaaagc atctgactgg ggctggcaga ttgacccggt gggtctgcgc
    26401 tattcattgt gtgaactgta cgaacgctat caaaagccgc tatttattgt cgaaaacggt
    26461 tttggtgctt acgacaaagt agaagaagat ggcagcatca acgacgacta tcgcattgac
    26521 tacctgcgcg cccatattga agagatgaaa aaagcggtga cttacgatgg tgtcgacctg
    26581 atgggctaca cgccgtgggg ctgcatcgac tgcgtgtcgt tcaccaccgg tcagtacagc
    26641 aagcgctacg gcttaatcta cgtgaacaag cacgatgacg gtacgggcga tatgtcgcgt
    26701 tcgcgtaaga agagcttcaa ctggtacaaa gaggtgattg ccagcaacgg cgagaagctt
    26761 taactcctgc acgttacccg ccagtcggcg ggtaacactt tgaacgagtc ttaccaggtc
    26821 ttacctattt taaattccca gcgtacatct tccattttgg ttggcgactt cgcttcctgc
    26881 attaccggga agaaggctcc ggcaccaaac cataatttca gtgaatcgac ggcaatatta
    26941 aatgacggac caacaaccca ttcggtagtt ccagaatggt tattaattac gctgccatta
    27001 gacagttttt tcgttccaga ggcattattg ctgtaggcac tttccagacc aagatccagc
    27061 ggtaaatcgc taaacatata ccgcacctgg gtattccact ggaattcgtt acctcgtttc
    27121 acgtcctggt taccgcgctc aaatggtccc tgatatacaa aacccatatc ccctttaatg
    27181 ttaggagtaa ataattttgt taaagtgagt gttactcttc ctccccaggc gctattccca
    27241 ggcaaatgat tatctccatc ttgcccggtg ggtagtaata ctgccccacc taccgtaacc
    27301 caaaacggat cacctcttcg ctggctcatt aaagcataat tgacccccac cgattggtcg
    27361 ctcattccct ctatgtgctc aggagacaga ttgtctcgtt tgttattgat ataggaaccc
    27421 acagttgata attccagtct gtcggtcaaa ccgtaacgaa tcttcaataa ccatatctgg
    27481 gagtaaacat ccggacttcc gtgcccctcg atttgatgat ctttatcgcg aaatgagcta
    27541 ttcacggcgg ttaataactt tccttccggc aatactgaac caccagaaat agcggtatta
    27601 actggtgcac ctaatagatt actgggatta ttttctccgt tagctgccat tgcattcatt
    27661 aatagaaaat atgtcattaa tggcagaaat ataaatcgtt tcattattcc ctccaggtat
    27721 aaaaaacaaa gcgctaagtt aataaatatt tacgttattt atgcttattt ttaatttata
    27781 atttaaatta atagcttgat gaatttaata tacggaaatt tttgtaacta tattgagagg
    27841 taaataacga ttccgaagag aaactatttg taactatatg taaatatgct gtgttgtttt
    27901 gattaaataa cagcaaggta aaaatgatgc acaatgaatc attaggctct aaaaaaccgg
    27961 taatttaatt ctggctaata cactgataca aacgccaggt tgcctgacag gagccaacga
    28021 tttactgtaa tatattgaat tagtaacact ttgtagcctg aataaggcac tcacactgca
    28081 tccgacataa acaaaacgca ctttattaac aagctgaaaa ggcgccgaag cgcctttaga
    28141 aaacagtcga atcagtaaat tactggtagt cgctaatcgg tacgcaggag cagaacaggt
    28201 tacggtcgcc ataaacatca tccagacgtt tcaccgtcgg ccagtatttg tctgccacgc
    28261 ctgccgggaa tacggcaact tcacggctgt acggatgcgc ccactcggcg accagttcgc
    28321 tctgaatgtg cggcgcgttc accagcgggt tatcttccag cggccagaca ccggctttca
    28381 cctggtcaat ctctgcgcgg atagccagca tcgcatcgat aaagcgatcc agctcagcct
    28441 taccttcaga ttccgtcggc tctaccatca gcgtgcccgc caccgggaac gacatggttg
    28501 gcgcatggaa accatagtcg atcagacgct tggcaatatc cagctcgctg atgccggttt
    28561 cttctttcaa tgggcgaata tcaagaatac attcgtgcgc cactcggcca tcgcgaccgg
    28621 tatacagtac cgggtacgcg tctttcagac ggctggcaat gtagttagcg ttaagaatcg
    28681 cgacctgact tgcctgcttc aggccttctg cgcccatcat gcggatgtac atccaactaa
    28741 tcggcaaaat ggaggcgctg ccgaacggcg ccgcagacac cgcgccctga cgggtgagca
    28801 tcccttcaat ttgcaccacg ctatgacccg gtacgaatgg cgccagatgc gctttcacgc
    28861 cgatcggtcc catgcctggg ccaccgccgc cgtgcggaat gcagaaagtt ttatgcaggt
    28921 taagatgcga aacgtccgcg ccaataaagc ccggtgaggt aatgccgacc tgagcgttca
    28981 tgttcgcgcc gtcaaggtaa acctgaccgc cgaactggtg cacaacttca cacacttcac
    29041 ggatcgtttc ttcatagacg ccgtgggtgg acggataggt caccatgatg caagagaggt
    29101 tcgcagcatg ttgttctgct ttggcccgca gatcgtccag gtcgatgttg ccgttcttat
    29161 cacacgccac aaccaccacc tgcattcctg ccatatgtgc agaagcaggg ttagtgccgt
    29221 gagcagaggc cggaatcagg cagatatcgc gatgcccttc gttgcggctt ccgtgataat
    29281 gacgaatcgc cagcagcccc gcgtactccc cctgcgcgcc ggagttcggc tgcatacaga
    29341 cggcgtcgta cccggtgagt ttcaccagcc agtcagaaag ctggctaatc atctgatgat
    29401 atccttcggc ctgctccggc gggcagaacg ggtgcagttc agcgaattcc ggccaggtga
    29461 tagggatcat ctcggcggcg gcgttcagct tcatggtgca ggaacccagc gggatcatcg
    29521 cctggttcag cgccagatct ttacgctcca gcgagtgcat atagcgcatc atctcggttt
    29581 cgctgtggta gcggttaaat accggatgcg tcagaatcgc atcgtcacgc agcatacctt
    29641 gctgaatgga acggctatca agcgccacgt ctttatccag tgtttcaatg ttcagaccgt
    29701 ggctgtcgcc cagcaaaaca ttgaacaact gcgccacatt ctcacgggtg gtggtttcat
    29761 caagggtaat acccaccgcg ttatgaatat cgctgcgcag attgatctct gccgcttccg
    29821 cacgcgccag taccgcagct ttatcagcta cttccacaca cagcgtgtca aagtagtgcg
    29881 catgacgcag ctttaagcct ttctgttgca gaccggccgc cagaatatcg gtcaggcggt
    29941 ggatacgatt cgcaatgcgt ttcaggccaa ccggtccatg ataaacggca tacagactgg
    30001 cgatgttagc cagcagtacc tgcgaggtac aaatgttgga gttcgctttc tcacggcgga
    30061 tatgctgctc gcgagtctgc atcgccatgc gcagtgcggt attgcccgcc gcatcttttg
    30121 agacgccgat aatacggcct ggcatggagc gtttaaattc gtctttggcg gcaaagaacg
    30181 ccgcgtgcgg gccaccgtaa cccatcggta cgccaaaacg ttgcgcagag ccgaaaacaa
    30241 tatccgcgcc ctgtttgccc ggcgcggtaa gcagcaccaa cgccataaaa tcggcggcga
    30301 cgctgacaat caccttacgg gctttgagtt cgctaatcag cgtgccgtag tcgtgaattt
    30361 cgcccgtggt gcctacctgt tgtaacagca cgccaaatac gtcctgatga tccagcactt
    30421 tgtccgcgtc atcgacaatc acgtcaaagc caaaggtttt ggcgcgtgta cgtaccacgt
    30481 ccagcgtttg cggatggacg tcagccgcca caaagaaacg gttggcattt ttcagtttgc
    30541 tgacgcgctt tgccatcgcc attgcttcgg cggcagcggt ggcttcgtca agaagagaag
    30601 ccgaagccat atccagtccg gtcagatcca gcgtcacctg ttggaagttg agcagcgctt
    30661 ccaggcgccc ctgagagact tccggctgat aaggagtgta ggcggtatac cagcctggat
    30721 tttccagcat gttgcgcagg ataaccggcg gtagctgcac ggcggtgtag cccatgccaa
    30781 tgtaggacgt gaagcgcttg ttacgcccgg cgatggcttt taattccgcc agtgcggcat
    30841 attcggttgc cgcctcgcca acctgcggcg gagtcgcgag ctgaatgtct ttcggcacaa
    30901 tctgacctgt cagcgcgttt aacgactcgg cgccaaccgc attcagcatc tcttgctgct
    30961 gcgcggcgtc cggtccgatg tggcgttcaa tgaaagcgcc gcggttttca agctggctta
    31021 gcgtctgtgt catgggcgat ggttcctgaa acgtgcagtg aatcgtaggt gtctctaact
    31081 caattgcccg gtggcgctga cgcttaccgg gcctacgcgt gcgaaaacga atacgcaaaa
    31141 tcattcgcgt tgcagtgagt aggccggata agcattagcg ccatccggca caacattatt
    31201 cgtcttctaa caatgcctca tacgcggtgg catccagcag cgattcaagc tcgctttcat
    31261 cgctggcttt gattttaaag atccagccac cggcatacgg ttcgctgttc accagctccg
    31321 gggagtcgct cagcgcatcg tttaccgcca cgatctcgcc gcttaccggc gcataaatgt
    31381 cggacgccgc ttttacggac tccgccacgg cgcagtcgtc gcccgcgctt acggtcgcgc
    31441 cgacttccgg cagatcaaca aaaaccatat cgcccaacag ctcctgagcg tgttcagtaa
    31501 tgccaacggt gtaagtgcca tccgcttctt tacgcagcca ttcgtgttct ttgctgtatt
    31561 tcagttctgc gggtacgttg ctcatcaatt aatctccaaa aaaggatgaa tcacgcgacg
    31621 gctttgccgt tacgcacaaa aacaggttta gtcactttta ccggcatttc acggttacga
    31681 atttgtacaa tcgccgtctc gccgatgccc gccggaacgc gcgccagcgc aatgctgtag
    31741 cccaacgttg gggaaaacgt cccgctggtg ataatgcctt cttgctgatt gccctgcgca
    31801 tcggtaaaac gcaccggcag ttcattacgc aatacgcctt tctcggtcat caccagaccg
    31861 acaagctgct catggccttt ttcacgctgc atctccagcg cctcacggcc aataaagtcg
    31921 cggtcagcag gttcccaggc gatagtccat cccatattag ccgccagcgg agagatacct
    31981 tcatccatct cctgaccgta caggttcatg cctgcttcca gacgcagcgt gtcgcgcgcg
    32041 ccaagaccgc acggcttcac gcccgcctcc accagcgcac gccagaaatc cgccgctttt
    32101 tcattcggca tggcgatttc atagcccgct tcgccggtat aaccggtggt ggcgataaac
    32161 agatcgcccg cctgaacgcc gaagaacggc ttcatacctt ctactgcatg gcgctgttgg
    32221 tcagtaaaca gagtcgccgc tttttcctgc gcattcggcc cctgtaccgc aatcagcgac
    32281 aggtcgtcac gaacggtgat gtcgatggca taaggttcag cgtgttgggt aatccaggag
    32341 aggtcttttt cgcgggtggc ggagttaaca acgagacgga agaaatcttc agtgaagtag
    32401 tagacaatca ggtcatctat cacaccgccc gatgcgttaa gcataccgga gtagagggct
    32461 ttacccgtct tcgttagctt cgcgacgtcg tttgccagca gataacgtag aaactctcgt
    32521 gtacggctac catgaagatc gacaatggtc atatgcgata catcaaacat cccggcatcg
    32581 gtgcgcacag cgtggtgttc atcaagctga gagccgtaat gcaggggcat catccagcca
    32641 tgaaaatcga ccatgcgggc gccgcatagc gtgtgttgtt cgtacaaagg cgtctgttgg
    32701 gccatctttt cctcgttgaa ttagcggggg ctaacaacca ttttcatggg aaatcttcgc
    32761 cacgaaacct ggcatcgacg ccctttttcc tgcgccgacg caaacgttct cttgctcctg
    32821 aacttaccac cgaaccaggc gctaaaccat aaggctgaat ttaccatcac attagcttat
    32881 gactaaaaaa cgctaaaatc ccatcagcac aaaaaaccac tattacgcta aataacttcc
    32941 ataaaaatga agctgatacg atttatcaca acataaatta atattaaatg cggaaaaaat
    33001 gtcgaaaatc gcgttctcca aaaatagtgg cattagaaaa tataatgcga aataagcggt
    33061 gaaattagat tatttcaaac gaggaaagcc ccccggcgcg atagccggga aagcaaagtg
    33121 tgacgggttt caaactcttg ctggcgtgca gtcagacgct taacgaagcc attgcggaag
    33181 gtcgtttagc cccattgcct ggcgaagcag ttggggtttg acgccgggga gcgtgtccgc
    33241 cagtttcagt ccgatgtcgc gcagcaattt ttttgccggg ttttcgccgg caaacaggtc
    33301 acgaaaacct tgcatcccgg caagcatcat cgccgcgcta tgtttacggc tacgctcata
    33361 acgacggaga taaagatgtt ggccaatgtc tttgccctgg cgctgaagcc ggcacagatc
    33421 gtccaccagt tcggccgcgt ccataaaacc gaggttgacg ccttgccctg ccagcggatg
    33481 gatggtgtgc gcggcatcgc cgaccaacgc cagacgatgc gcggcaaact ggcgagcata
    33541 gcggcccgtc agcggaaaaa cctgccgttc gctttccagg cggcataagc ccagccgatt
    33601 atcgaaggcg atagtcaacg cctggttaaa cgcctcgtcg ccgctctgtt gcatacgctc
    33661 cgcatcctgc ggagaaagcg accagacaat ggaacacaga tgcggatcgc ttaacggcaa
    33721 aaacgccaga ataccttcac catgaaacac ctggcgagca accgcgccgt gcggctcttc
    33781 ggtgcggata gtcgctacca gcgcatggtg acggtagtcc cagaaagtta agggaatatc
    33841 cgctttgtta cgcagccagg agttggcgcc atccgcggca atcaccagac gcgcggttaa
    33901 catcgcgccg tcttttaaag tcaggaaggc gtcattctct ccccaggcaa cctgctgtaa
    33961 ctccgctggc gccattaagg tgatatccgc cgcttgctgc gctttttgcc acagtgcata
    34021 gtgaatgacg ctgttttcaa caatatgccc cagatggcta tatcccatgc ttgcgtcatc
    34081 aaacgtaata cggccaaagc tgtctttatc ccagacttcc ataccgtggt agcaacttgc
    34141 ccgtcgcgcc acaatgtttg accatacgcc aagacgggta agcagttttt cgctggcggc
    34201 attaatcgcc gacacccgaa gctgaggcgg cgcatcgttc gccaactgct ggggaacaac
    34261 gtgatccagt accgcaacgc gcaaaccgct cccctgcaag ccgcaggcga cagccagtcc
    34321 caccatgcct ccgccaacta ttgctacatc aacactttgc actatttact cctggaaacc
    34381 ggaacaatca aaaccgtagg ccggataagg cgtttacgcc gccatccggc atttttacga
    34441 acacgatgcc ggatggcggc gtaaacgcct tatccggcct acagatctgc ttaacgcgca
    34501 acccaaccta aggttcgctg tgccagcgca tcgcgcgcag gtggtaataa ttccatcgcc
    34561 attaaaccga tattgcgccc aataaccagc ggcgcccaac gatttgcaaa cagatggacc
    34621 agaccgttcg ttacgccaat cgtcgtatcc cggtcaacct gacgacgctg ctgatagcgc
    34681 gataacacgt gccaggcgcc aatatcctcg cccgcgtcct gtgccgcgac cagcgtttcc
    34741 gccaggctca tgacatcgcg cagaccgaga ttaaaccctt gtccggcgat aggatgcaac
    34801 gtctgcgccg cattgccgac cacgacagtc cggtgagtaa acactttcgc cgccgtagtc
    34861 agggcaagcg gatacgcgct gcgcttaccc gcctgagtaa ttcgccccag ccgccagccg
    34921 aacgcggcct gcaacgcatg acagaactgc gcgtcggacc agctcagcac ctcatcgcgc
    34981 tggtcgagcg ggtgacacca aaccagcgaa catcggccat gcgacatcgg caacatcgcc
    35041 agcgggccat tgggggtaaa acgttcaaag gcgcgtccct ggtgcgggat agcggtcgcg
    35101 acattcgcta tcaccgctaa ctgttcgtaa ggctcctgat gccagtcaac gccgcaggct
    35161 gatgccagcg cggagtgggt accgttagcc gccaccagca cgctgccagc tatcacattg
    35221 ccgttttcca gagtgacgtt aacctgctgt tgggtacgcg acacgctggc tacgcgctcc
    35281 gggcagtgca gcgtaacgcc tggcgcttta cgcaagagcg caaacagacg cagcccgata
    35341 tcatgcagct ccgcaacgtg acccaacgct gccaggctgt aatcctgcgc gtctagagtc
    35401 acaaatccgg catgaccgcg atcgctgacg tgtacggtgt tgattgccgt tgcgcaatcg
    35461 gaaatcgcct gccagacgcc aattcgcgcc agttgctggc aagtgcccgc cgccagcgca
    35521 atcgctctgg cgtcaaagcc gggatgaccg tcggcttcag gcgctttcgc ttcaatcagg
    35581 tgtaccggca acgtcccatg actgaactga gagatggcca gcgccagcgt tgcgcctgcc
    35641 atgccgccgc caacgataat gacgctcatt gctgccgcgc cgccgccatt aatgcctcaa
    35701 tgtcatccgc cttcttcaca acgccagcgg tcaggttttc attaccggtt tcggtaatga
    35761 caatgtcatc ttcaattcga acgccaatgc cgcgatacgc ttccggcacg tcggcatccg
    35821 gcgcgatata gaggcctggc tctacggtca gcaccatgcc cggctccagg atgcgggagc
    35881 gatccggccc ataaacgccg acatcatgaa catccagccc cagccagtgg ctcaagccat
    35941 gcataaagaa aggacgatgc gcattctcgg caatcagttg atcaacctct ccttgcaaaa
    36001 tccccaactt caccagcccg gttatcatga tgcgcactac ttcgccggtc acctgctgaa
    36061 tagaggtacc aggacggaac agtcgcaggc tggtctccag cgattccaga acgatgtcat
    36121 aaatttcacg ctgagctggc gtaaatttcc cgttcaccgg gaaagtacgc gtgatgtcgc
    36181 ccgcgtaacc tttatattca cagcccgcgt cgataagcac taaatcgccg tcgcgcattt
    36241 cactttcgtt ttcagtgtaa tgcaggatac agccattttc gccgctgccg acaatggtgt
    36301 tataggaggg atagcgcgcg ccatggcgat taaattcgtg gtgaatttca ccctccagct
    36361 gatactcaaa catccccgga cggcattttt ccatcgcgcg gatatgcgcc agagcgctaa
    36421 tttccccggc gcggcgcagg acagcaatct cttccggcga tttgaacagg cgcatctcat
    36481 ggacgatcgg tcgccagtca gtcatggtgg ccggcgcggt cagattctgg cgggagcctt
    36541 tacgcagctt ctccagcgca gccagaacaa tctcgtcggc atacgcatat tcgccctgcg
    36601 cgtggtacac cacatccaga ccattaagca actgaaagag ttgctggttg atttcgctaa
    36661 acgccagcgc ccggtcaacg cccagttttt ccggcgcggc atcctgtcct aaacggcgac
    36721 caaaccagat ttccgccgtc aggtcgcgaa cgcggttgaa caaaacgctg tggttgtggg
    36781 tgtcatcact cttaatcagt accagcacgg cttccggttc gttaaaaccg gtgaaatacc
    36841 agaagtcgct actctggcga tacggatatt cactgtctgc gctgcgcgtc gcctccggcg
    36901 cggcaaagat cagcgcggcg ctgccgggct gcatttgcgc cagtaatgcc tggcgacggc
    36961 gttggtattc ctgctgagtc atgacatggc ctccatttcg ttttttctta gtgtagcgtc
    37021 ggtttacgca cttccggcgc ggtcggctgt tggcgcgtga aagtgtcatg acataacagc
    37081 gccgcaacac ggacatattc gatgatctct tcgagcgaca tctccagctc ttcctgatct
    37141 tcgctctcat cataaccaag ctgcgcaata ttacgcaggt cgtcaatcgc ttcacccgtt
    37201 tcgccggtga ctttatcaag tttaggctgc gttacgccga ggccaagcaa aaagtggtta
    37261 acccacccgg ctaatgcatc tgcgcgatcg aatacgctga catcgtcgcc ttcaggcaga
    37321 taaagctgaa aaagaaagcc gtcgtcttcc agcgcgtcgc tggtcgccgc gtgcattttg
    37381 cgcagcgcct gagcaagctc atgcccgaag gccagacctt cgttcgtcag gtcatgcaac
    37441 agcggctgcc atgagctgtc gttgttgccg ccgcaaatca tcccgctgat taaaccatgc
    37501 atttcagccg gggtcagacc ggccccttgt tgattcaaaa accggttcat ttcgtcgtaa
    37561 ccaggcattt cgttctgtat agacataagc attcgtcatc aaagggagga tattcatgat
    37621 atgctaccac tttggaccct ggtgaaccag aaaagggctt gtatcttcac accagggtag
    37681 ctatagtgtc gccccttcgc ggaccctggg tctggagacg aaggcagcgc agtcaatcag
    37741 caggaaggtg gcatgtctgc acaacccgtc gatatccaaa tatttggccg ttcactgcga
    37801 gtgaattgcc cgcctgacca aagggatgcg ttgaatcagg ctgcggacga tctgaatcag
    37861 cggttgcaag atctgaaagt tcgtactaga gtcacaaata ctgagcagtt ggttttcatt
    37921 gccgcattga atatcagcta tgagttaact caggaaaaag cgaagacccg cgattacgcg
    37981 gcgagcatgg aacaacgtat tcggatgcta caacagacca tcgaacaggc gttgcttgat
    38041 caaggtcgca taaccgaaaa aacgggccaa aactttgaat aacacttttc gctttactat
    38101 ggtaaagtga ttgtgaaaac agtatttctc tgagatgttt gcaagcgggc cagtcccctg
    38161 agccgatatt tcataccaca agaatgtggc gctccgcggt tggtgagcat gctcggttcg
    38221 tccgagaagc cttaaaactg tgacgacaca ttcaccttga accaagggtt caagggttac
    38281 agcctgcggc ggcatctcgg agattcccct tctgactggc gacagccatg acgcaacttc
    38341 ccgaactctc tttatcacga caagaaatcc gccgaatgat tcggcaacgt cgccgtgcgc
    38401 tgacgccaga gcagcaacgc cgctttggtc aacaggccgc cgcccgaatg ctcagctttc
    38461 ctcccgtcgt gatggcgcac actgtcgccg tgtttctctc ctttgatggc gaactcgaca
    38521 cccagccgct gatagaacag ctatggcaag cgggcaagcg cgtctacctt ccggttcttc
    38581 atcccttcag ccctggcaac ctcctgtttc tgcactatca tccgcagagt gcgctggtga
    38641 ccaaccgctt aaatatccgg gagccacggc ttgatgtccg cgacgtattg ccgctggcaa
    38701 agctggatgt gctggtaacg ccgttagtcg cgtttgacga aggcgggcag cgtttaggca
    38761 tgggcggcgg tttttatgac cgcacgctac aaaactggca gcagcataag atcctacctg
    38821 tgggctacgc gcatgattgc cagttagtag aaaaactgcc ggttgaagag tgggatatcc
    38881 cgctgcctgc ggtggtgacg ccgtccaaaa tttgggagtg gtagccgtgt tttgtcgatt
    38941 gacagcgtcg cttttttgac ctaaatttct cggtgaaggg tgagggaggc gaacctccct
    39001 cctgcgtact cactgttaat atgctgggca agcgatgatt aacaggatca gcagcatgat
    39061 gacgtatctc atcatcgtcc ctttcctttt tagagcccct gcctcggtag gggctttccc
    39121 gtttcagcgc tatgctgagc ccttatcgta aattcctttt attgctgtac aacacgcaac
    39181 gctgccttta attaccaatt gcggcaaggc tcgaaaacag aatgtatgcg ttacacgaag
    39241 agatgttgag gcagggaaac cagagaaagg atgggcaggt catctcctgc ccatttagag
    39301 gaaattagta cagcagacgg gcgcgaatgg tgcccggaat cgccttcatc gccagcagcg
    39361 ctttctccgc cacatcgcca tcggcttcta tatcaattac cacatacccc attcgggcgg
    39421 aggtttgcag atactgtgcg gcaatgttaa cgccctgctc ggcaaagatc tggttaagcg
    39481 cggtcaatac gcccgggcgg ttttcgtgga tgtgcatcag gcgacgaccg ccgtgcagcg
    39541 gcagcgacac ttccgggaag ttcacggcgg acagcgtcga gccgttatcc gagtacttaa
    39601 tcagttttcc tgcgacttcc agaccgatgt tttcttgcgc ctcctgcgtc gagccgccga
    39661 tatgcggcgt caggatcacg ttatcgaatt cgcacagcgg agaggtaaac ggatcgctat
    39721 tagtggccgg ttccgtcggg aagacgtcga tagccgcccc cgccagatgt ttcgtcgcca
    39781 gcgcgtcgca caaagccggg atatccacta ccgtaccgcg cgcggcgtta atcagcagcg
    39841 aacccggctt catcagggct atctcttttg cgcccatcat gtttttggtg gaggcgtttt
    39901 caggtacgtg cagactgacc acatcgctca tattcagcaa ttcagacagg tgctgcacct
    39961 gagttgcatt accgagcggc agtttatttt caatatcata gaaatagata tgcatcccca
    40021 gcgattccgc cagaatgccc aactgcgttc cgatatggcc gtaaccgata atgccaagct
    40081 ttttaccgcg tgcttcgaac gatcccgccg ccagtttatt ccatacgccg cggtgcgctt
    40141 tggcgttcgc ttccggcacg ccgcgcagca gcagcaatag ctcgccaatc accagctccg
    40201 ccacggaacg ggtattcgag aatggcgcgt taaagaccgg aataccgcgt tttgccgccg
    40261 catttaaatc cacctggttg gtgccgatgc aaaaacagcc aatcgccacc agcttctctg
    40321 cggcgttaat cacttcttct gtcagatgag tacgggatcg cagaccgatg aagtgggcat
    40381 cgcggatgga cgctttcaac tgttcagcgt ccagcgcgcc cttgtgatat tcaatgttgg
    40441 tgtaacctgc cgcacgaagg ctttccagcg ccttttgatg caccccttca accagcagaa
    40501 atttaatttt atctttctcc agcgatacct ttgccatttc cccgatcctg tctttttttg
    40561 ccatctgatg ttgtgtgtgg atttgcatcc gtccttcaac atatcaaaaa aaattatcac
    40621 ggcaatatga acgtttgcgc caacgccgtg aaggaatcgc atacagcggg aaatagcaga
    40681 tgaaaatacc gggaataact tttctttgga gggatcggca gggcaaacga ttaaacgtga
    40741 tacatgtcac caaatttgcc ctgaccgaat tctttacgcg gcaggaaata cgcctggcgg
    40801 gatcatttta cgatggtttt caccccgtcc ggcgtgccga tcagtgcgac atcggcgcca
    40861 cggttggcga acaaccctac ggtcacgacg cccggaatcg cgttaatggc gttttccagc
    40921 gcgatgggat caaggatttc cataccataa acatccagaa tcacgttgcc gttatccgtg
    40981 accacgttct gacggtactc cggacgcccg cccagcttca ccagttgacg agcaaccgcg
    41041 ctgcgcgcca tcggaatcac ttcgaccggc aacgggaatt tgccaagaat atccacctgt
    41101 ttagaggcat ccgcaataca gataaatttc tccgccacgg aagcaataat tttctcacgg
    41161 gttaatgccg cgccgccgcc tttgatcatc tgcatatgac cgttgatttc gtccgcgcca
    41221 tcgacataga tacccaggct atccacttcg ttgagatcaa acacatgaat accgaggcct
    41281 ttgagttttt cagtcgaggc gtccgagctg gagaccgcgc cttcaatctg gcctttcatt
    41341 gtgcccagcg catcaataaa gtgtgcggcc gttgagcctg taccaacgcc cacaatggtg
    41401 ccgggctgta catactgaag tgccgcccat cctaccgctt ttttcagttc atcctgcgtc
    41461 atagatcgtt tcgcctgtgg tgtgaaaata cagccgcatt atagaacatt gtcgggaaaa
    41521 atctccgtgt ccgtacacag gctacggatt tcatctgtac cgacggcaaa tttatgtcat
    41581 agtgcggaaa aaataacagg agcatgacac aacaatgaaa cgtccggact acagaacact
    41641 acaggcgctg gatgccgtta tacgtgaacg aggattcgag cgcgccgccc agaagctgtg
    41701 catcacgcaa tccgccgtct cacagcgcat aaaacagctt gagaatatgt tcggacaacc
    41761 tttgttggtg cgtaccgttc ctcctcgccc cacggagcaa gggcaaaaat tactggctct
    41821 gctgcgtcag gttgaactgc tggaagaaga gtggctgggc gatgaacaaa ccggctctac
    41881 gccgctactg ctgtcgctgg cggttaacgc cgacagtctg gcgacctggc tgcttccggc
    41941 gctggcgcca gtactggcgg actcccctat ccgtctcaat ttacaggtgg aagatgaaac
    42001 gcgcacgcaa gaacgtctgc gtcgcggcga ggtggtgggc gcggtgagta ttcagcatca
    42061 ggcgctgccc agttgcctgg tagacaaact gggcgcgctc gactatctgt ttgtcgcgtc
    42121 aaagccgttt gccgagcgct attttcccaa tggcgttacc cggtcgtcgc tgctgaaagc
    42181 gcccgccgtc gcgttcgacc atctggatga tatgcatcag gcttttttgc aacagaattt
    42241 cgatctaccg cccggcagcg tgccgtgcca tatcgttaat tcatccgaag cgtttgtaca
    42301 gcttgcgcgt cagggcacgg cctgctgcat gatccctcac ctgcagattg agaaagagct
    42361 ggaaagcggc gagttgatca acttaacgcc tggcttgcta caacgccgga tgctttactg
    42421 gcaccgcttt gccccggaaa gccggatgat gcgcaaagtg accgacgcgc tgctggagta
    42481 cgggcacaag gtgctgcgtc aggattagcc tctctatgaa tgccggatgg cggcgtgaac
    42541 gtcttatccg gcctgcatga cccattattc ccccgtcgct tctttgaaat tgatcacaaa
    42601 atcattgcgt tcaggcggca aaaaacgacg cgccattggc tattttttgc tggcggcaag
    42661 gcgactcaaa acgctcaccg tattatcaaa tcttcatttc attgcgtaat acggagcaaa
    42721 aaatgagaac accgggagaa aacgcggcct ggaagcgccc aggccgggcg agattactgc
    42781 gtgctggcgg ccgttgtcga cgtctgccct gttccaggtt caagctggaa taccacatcg
    42841 acctgatcgt cgaactgaat agtcggctgc tcgtaagttt cctgcgcgga taccggcgca
    42901 gcatctgcgg ctttcatcat tcgcaccacc ggactcggct gataattaga gacatggtaa
    42961 cgaacgctgt aaaccggccc caatttgctg ttaaaaccgg ctgccagcgc ttgcgcctga
    43021 tgaatcgcgt catcaatggc ggctttgcgg gccttgtctt tataggcgtc cggttgcgcc
    43081 acgcccagcg ataccgaacg aatctcgttc agacccgcct tcagcgcgcc gtccagcagc
    43141 gaattgagtt tatctaactg acgcagcgtc acctcaacgg ttcgcaccgc gcgataccct
    43201 ttcagaatgc ttttaccgtt ttggtaatca taatccggct gcgtgcgcag attcgccgcg
    43261 ctaatgtctt ttttcgcaat ctgattttgc tcaaggaagg aaagatattg cgccacgcgc
    43321 tcatcggcct gcttcttcgc cgtcgccgca tccttcgccg cgacgttcac ttcaatcgct
    43381 aaggtggcga tatcaggcac agcatcgacg cttgctgtac cggaagtcac gatgtgcggg
    43441 ccttccggca attcgcttgc ctgcgccgac attgcactta aacccactaa tgccgccagg
    43501 gccatcactt tgaacttcac agtctctcct ccatattgca gtcattgccc tgatatacag
    43561 ggcgcatgca ggcaagctta gcggatatcg gtctgttgtc catcagacaa cgcttagttg
    43621 aaaagcgcgt gcatatgcgc gacgccttcc cgcgccagtt ggaaggcgat aagccacatc
    43681 accaccccta ccagaatgtt gataatgcgt tgagctttcg ccgtacgcag tcgaggcgca
    43741 agccaggccg ccagtagcgc taacccaaaa aaccataaga acgacgcgct aatcgtgccg
    43801 agagcaaacc agcgctttgg ctccatagcc agttgtccgc cgagactgcc caacacgaca
    43861 aacgtatcca gataaacgtg cggattcagc caggttaccg ccagcatcgt agcaataatt
    43921 ttccagcgcc cctgcttcat aacctcggcg ctggccagct ccagattact gctcattgcc
    43981 gttttcagcg cgccaaaacc gtaccataac aagaacgcaa ccccgcccca tgtgaccagc
    44041 gccagcagcc acggcgactg catcagcaac gcgctaccgc caaaaatacc ggcgctaatc
    44101 aggactaaat cacttaacgc gcaaagcagc gctatcatga ggtggtactg gcgacgaatt
    44161 ccctgattca tcacaaacgc attttgcggg ccaagcggaa ggatcatggc ggcgccaagg
    44221 gcaacccctt gaaaataata agatatcacg ttaactaccc tgagctgttt ttcttaaagg
    44281 cagactatag cgcgggaata ttattagcgg aaattgataa ttttaatcac taataagaaa
    44341 agctaataaa gagactgaat aacggatggc ggctacgctt atccgctcaa taaccagaga
    44401 atactggagg cggataagcg cagcgccggc aggcagcacg ggaggaaaat tactccgcgg
    44461 cgttatcttt cacgcgttta aaattgacgt ccatctgcgg gtacgggaag ctaataccag
    44521 cggcgtcgaa ttcacgttta atacgttcca gcacgtccca atagacattt tgcaggtcgc
    44581 tgcttttact ccagacacgc accacaaaat taattgatga ggcgcccagc tcattcaaac
    44641 gcaccgtcat ttcgcgatct tttaaaatac gatcgtcgga ctcgataatc gtcgttagca
    44701 gctgtttcac ctgatcgata tccgaatcgt aggccacccc aataatgaat tcgttacggc
    44761 gaaccggctc acgagaatag ttgatgatat ttcccgcgat aattttgcca ttcggaatca
    44821 caataatttt gccgtctacc gcgcgcattg tcgtggaaaa gatttgcacg ttcagtaccg
    44881 taccggcaac gccgcccaaa tcgacatact caccggcgcg gaacggacgg aacataacca
    44941 gcaatacccc agccgcaagg ttagaaagcg atccctgtaa tgccaggcca acggctaaac
    45001 cagcggcgcc cagtacggca ataaccgagg cggtttgaac ccccacgcga cccagagccg
    45061 caatcagcgt aaaagcgata accccatagc gcaccagcgc agaaagaaag tcggctactg
    45121 tcgcatcaat atgacgcgca cgcatcagac gatttaccgt attggagatc acgcgcgcta
    45181 caatcaagcc gatgatgata atagcgatag ccgcaacaat attcacagca tagctgagca
    45241 ataacgcctg gttgcgtacc agccaggtgc ccgcaccatt tatgctgtcg acaacattca
    45301 aatcttccat tcaatattcc ttggtcatag caaaacaagc aaatgagatc attctcacga
    45361 aaagaacttt ttaaaggtaa acaaaaacag aggaatatgc catttttcgg catcatccca
    45421 aaaaaggcag gtacactgtg agttggccgg atgaaagcgc taactaacgc cgctctccgg
    45481 aaataacgat aataaatatc ctccggcata gccggaggtt tttcagatgc gcctgtaagg
    45541 ctctcttacc agccgcgccc taacaggcgc atacgatctg acatttgcat caaacttcgt
    45601 tacttacggc ccgtaaacgg gctgcccgga taagggatcg ataattgctc acccatttta
    45661 tcctcttcaa gctggtgctt tatgtagtcc tgtatcttcg ccgtgttctt acccaccgta
    45721 tcgacatagt accctctgca ccagaactcc ctgttcctgt atttgaattt tagatcccca
    45781 aactgctcgt aaagcatcag actactttta cccttcagat atcccatgaa
//
LOCUS       DAGWFR010000015        42734 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.015, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000015 DAGWFR010000000
VERSION     DAGWFR010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 42734)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 42734)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..42734
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.015"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..129
                     /gene="dapF"
                     /locus_tag="MOX77_000968"
     CDS             <1..129
                     /gene="dapF"
                     /locus_tag="MOX77_000968"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133314.1"
                     /note="involved in lysine biosynthesis; DAP epimerase;
                     produces DL-diaminopimelate from LL-diaminopimelate;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HCA3356585.1"
                     /translation="LLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAAHIYDGFIHL"
     gene            126..833
                     /locus_tag="MOX77_000969"
     CDS             126..833
                     /locus_tag="MOX77_000969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF484 domain-containing protein"
                     /protein_id="HCA3356586.1"
                     /translation="MKQPEEELQETLTELDDRAVVDYLRHHPEFFIRNAHAVEAMRVP
                     HPVRGTVSLVEWHMARARNHINVLEENMTLLMEQAHANESLFYRLLHLQSRLVAADSL
                     DEMLMRFHRWARDLGLAGATLRLFPDRWRLGAPSRYTHLALNRQAFEPLRIQRLGQSQ
                     HYLGPLNGPELLVVLPEAKAVGSVAMSMMGSDGDLGVILFSSRDPHHYQPGQGTQLLQ
                     EIALMLPELLERWIKRV"
     gene            830..1732
                     /gene="xerC"
                     /locus_tag="MOX77_000970"
     CDS             830..1732
                     /gene="xerC"
                     /locus_tag="MOX77_000970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HCA3356587.1"
                     /translation="MTEVALSLDVSRFLRYLGVERQLSPITLQNYQRQLDAIIALAGE
                     TGLKSWQQCDAAIVRSFAVRSRRKGLGPASLALRLSALRSFFDWLVSQGELKANPAKG
                     VSAPKAPRHLPKNIDVDDVNRLLDIDLNDPLAVRDRAMLEVMYGAGLRLSELVGLDIK
                     HLDLDTGEVWVMGKGSKERRLPIGRNAVTWIEHWLDLRGLFASDEEALFLSKLGKRIS
                     ARNVQKRFAEWGIKQGLNSHVHPHKLRHSFATHMLESSGDLRGVQELLGHANLSTTQI
                     YTHLDFQHLASVYDAAHPRAKRGK"
     gene            1732..2448
                     /gene="yigB"
                     /locus_tag="MOX77_000971"
     CDS             1732..2448
                     /gene="yigB"
                     /locus_tag="MOX77_000971"
                     /EC_number="3.1.3.104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-amino-6-(5-phospho-D-ribitylamino)uracil
                     phosphatase YigB"
                     /protein_id="HCA3356588.1"
                     /translation="MRFYRPLGRIAALTFDLDDTLYDNRPVILRTEQEALAFMQNYHP
                     SLRSFQNVDLQRIRQAVREAEPEIYHDVTRWRHRAIEQAMRDAGLSAQESIAGANAAM
                     MHFAKWRSQIEVPQATHETLQQLAKKWPLVAITNGNAQPELFGLGDYFKFVLRAGPDG
                     RSKPFSDMYFLAAEKLHVPIGEILHVGDDLTTDVAGAIRCGMQACWIKPENADLMRTQ
                     DSRLLPHIEISRLASLTSLI"
     gene            2584..4746
                     /gene="uvrD"
                     /locus_tag="MOX77_000972"
                     /gene_synonym="mutU"
                     /gene_synonym="recL"
     CDS             2584..4746
                     /gene="uvrD"
                     /locus_tag="MOX77_000972"
                     /gene_synonym="mutU"
                     /gene_synonym="recL"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase II"
                     /protein_id="HCA3356589.1"
                     /translation="MDVSYLLDSLNDKQREAVAAPRSNMLVLAGAGSGKTRVLVHRIA
                     WLLSVENNSPYSIMAVTFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHH
                     MDANLPQDFQILDSEDQMRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ
                     SYGNPVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNIL
                     VDEFQDTNNIQYAWVRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAQT
                     IRLEQNYRSTSNILSVANALIENNNGRLGKKLWTDGVDGEPISLYCAFNELDEARFVV
                     NRIKTWQDNGGALAQCAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDAL
                     SYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKAL
                     AGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIEN
                     LEELVTATRQFSYNDEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLE
                     FPQVFIVGMEEGMFPSQMSLDEGWRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKE
                     VYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTPLAENDTGYKLGQRVRHAKFG
                     EGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYAKLETV"
     gene            5218..6168
                     /gene="corA"
                     /locus_tag="MOX77_000973"
     CDS             5218..6168
                     /gene="corA"
                     /locus_tag="MOX77_000973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000947142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium/cobalt transporter CorA"
                     /protein_id="HCA3356590.1"
                     /translation="MLSAFQLEKNRLTRLEVEESQSLIDAVWVDLVEPDDDERLRVQS
                     ELGQSLATRPELEDIEASARFFEDEDGLHIHSFFFFEDAEDHAGNSTVAFTIRDGRLF
                     TLRERELPAFRLYRMRARSQAMVDGNAYELLLDLFETKIEQLADEIENIYSDLEKLSR
                     VIMEGHQGDEYDEALSTLAELEDIGWKVRLCLMDTQRALNFLVRKARLPGGQLEQARE
                     ILRDIESLLPHNESLFQKVNFLMQAAMGFINIEQNRIIKIFSVVSVVFLPPTLVASSY
                     GMNFEFMPELKWSFGYPGAIIFMILAGLAPYLYFKRKNWL"
     gene            complement(6217..6597)
                     /locus_tag="MOX77_000974"
     CDS             complement(6217..6597)
                     /locus_tag="MOX77_000974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2628 domain-containing protein"
                     /protein_id="HCA3356591.1"
                     /translation="MDKDYINDGSLSEKWKYRFSFYDQHGFPGFWKVSPEYKQAFKAL
                     KPRQRLTIQINFIAFFFSWIYLFVLGLWKKAIIVILLGIVAIFIGALIGVNILGLVVA
                     AYVGVNTNKWFYEKEVKGINTWSL"
     gene            complement(6613..7071)
                     /locus_tag="MOX77_000975"
     CDS             complement(6613..7071)
                     /locus_tag="MOX77_000975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356592.1"
                     /translation="MPPLVRGVAYCHANDVTQHMDVKLMLSVFIPSSERCVSRCRYLL
                     SFALINIIFSILVGVLLYLSFVILAILFTILLHYLVINLNCQRFRDSGFEYIKFYVWG
                     TLVIYIASFVIMVAEDFACDGFGMPLFLIWYFATFSLLLLAPPDSNSLNK"
     gene            complement(7106..7990)
                     /gene="rarD"
                     /locus_tag="MOX77_000976"
     CDS             complement(7106..7990)
                     /gene="rarD"
                     /locus_tag="MOX77_000976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter RarD"
                     /protein_id="HCA3356593.1"
                     /translation="MDAKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVI
                     WSFFFMVALLSVSRQWRQVKRLLKTPKKIFLLALSAVLVGGNWLLFIWAVNNHHMLEA
                     SLGYFINPLVNILLGMIFLGERFRRMQWLAVILAVCGVLVQLWTFGSLPIIALGLAFS
                     FAFYGLVRKKIAVEAQTGMLVETLWLLPVAAIYLFSIADSATSHMGQNALSLNLLLMA
                     AGVVTTIPLLCFTGAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEVPGADKMVTFAFI
                     WVALAIFVMDAIYTQRKK"
     gene            complement(8034..8501)
                     /locus_tag="MOX77_000977"
     CDS             complement(8034..8501)
                     /locus_tag="MOX77_000977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312777.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HCA3356594.1"
                     /translation="MSAVLTAEQALKLVGEMFVYHMPFNRALGLELERYEKAFAQLAF
                     NNQPMMVGNWAQSILHGGVIASALDVAAGLVCVGSTLTRHETISEDELRQRLSRMGTI
                     DLRVDYLRPGRGNRFTATSSLLRAGNKVAVARVELHNEDQLYIASATATYMVG"
     gene            8666..9535
                     /gene="pldA"
                     /locus_tag="MOX77_000978"
     CDS             8666..9535
                     /gene="pldA"
                     /locus_tag="MOX77_000978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase A"
                     /protein_id="HCA3356595.1"
                     /translation="MRAILRGLLPATLLPLAAYAQEATIKEVHDAPAVRGSIIANMLQ
                     EHDNPFTLYPYDTNYLIYTNTSDLNKEAISTYNWSENARKDEVKFQLSLAFPLWRGIL
                     GPNSVLGASYTQKSWWQLSNSKESSPFRETNYEPQLFLGFATDYRFAGWTLRDVEMGY
                     NHDSNGRSDPTSRSWNRLYTRLMAENGNWLVEVKPWYVIGSTDDNPDITKYMGYYQLK
                     IGYHLGEAVLSAKGQYNWNTGYGGAEVGLSYPVTKHVRLYTQVYSGYGESLIDYNFNQ
                     TRVGVGVMLNDIF"
     gene            9619..11448
                     /gene="recQ"
                     /locus_tag="MOX77_000979"
     CDS             9619..11448
                     /gene="recQ"
                     /locus_tag="MOX77_000979"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026263.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecQ"
                     /protein_id="HCA3356596.1"
                     /translation="MAQAEVLNLESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCL
                     VVMPTGGGKSLCYQIPALLLDGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQSRE
                     QQLEVMAGCRTGQIRLLYIAPERLMLDNFLDHLAHWNPVLLAVDEAHCISQWGHDFRP
                     EYAALGQLRQRFPALPFMALTATADDTTRQDIIRLLGLNDPLIQISSFDRPNIRYMLM
                     EKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRA
                     DVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPA
                     EAMLFYDPADMAWLRRCLEEKPAGQLQDIERHKLNAMGAFAEAQTCRRLVLLNYFGEG
                     RQEPCGNCDICLDPPKQYDGLNDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDF
                     GHDKLKVYGMGREKSHEHWVSVIRQLIHLGLVMQNIAQHSALQLTDAARPVLRGDVPL
                     KLAVPRIVALKPRVMQKSFGGNYDRKLFAKLRKLRKAIADEENIPPYVVFNDATLIEM
                     AEQMPVSASEMLSVNGVGMRKLERFGKEFMALIRAHVDGDDEE"
     gene            11512..12132
                     /gene="rhtC"
                     /locus_tag="MOX77_000980"
     CDS             11512..12132
                     /gene="rhtC"
                     /locus_tag="MOX77_000980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine export protein RhtC"
                     /protein_id="HCA3356597.1"
                     /translation="MLMLFFTVAMVHIVALMSPGPDFFFVSQTAVSRSRKEAMMGVLG
                     ITCGVMVWAGVALLGLHLIIEKMAWLHTIIMVGGGLYLCWMGYQMLRGALKKQDAAAS
                     SPHIELAQSGRSFLKGLLTNLSNPKAIIYFGSVFSLFVGDNVGAAARWGIFALITLET
                     LAWFTVVASLFALPKMRRGYQRLAKWIDGFAGALFAGFGIHLIISR"
     gene            complement(12172..12792)
                     /gene="rhtB"
                     /locus_tag="MOX77_000981"
     CDS             complement(12172..12792)
                     /gene="rhtB"
                     /locus_tag="MOX77_000981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine/homoserine lactone efflux protein"
                     /protein_id="HCA3356598.1"
                     /translation="MTFEWWFAYLLTSTLLSLSPGSGAINTMTTSINHGYRGAAASIA
                     GLQTGLGIHIVLVGVGLGTLFSRSLIAFEILKWAGAAYLIWLGIQQWRAAGAIDLHTL
                     AQTQSRGRLFKRAIFVNLTNPKSIVFLAALFPQFIMPQQPQLAQYLILGVTTIVVDMI
                     VMTGYATLAQRIAAWIKGPKQMKALNKAFGSLFMLVGALLASARHA"
     gene            12903..13919
                     /gene="pldB"
                     /locus_tag="MOX77_000982"
     CDS             12903..13919
                     /gene="pldB"
                     /locus_tag="MOX77_000982"
                     /EC_number="3.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipase L2"
                     /protein_id="HCA3356599.1"
                     /translation="MFQQQNDWETRENAFAAFAMGPLTDFWRQREEAEFIGVDNIPVR
                     FVRFRNDSNDRTIVICPGRIESYVKYAELAYDLFHLGFDIFIIDHRGQGRSGRMLSDP
                     HRGHVDHFNDYVEDLAAFWQQEIEPGSWRKRYILAHSMGGAIATLFLQRHRVRCDAIA
                     LTAPMFGIVIRLPSFMVRHILDWAEGHQRIREDYAIGTGQWRALPFGMNALTHSRQRY
                     QRNLRFYADEPQLRVGGPTWHWVREGILAGEQVLAGASDDTTPTLLIQAEEERVVDNR
                     THDRFCEIRAAAGYPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVEFFNKPNLSSG
                     NRFA"
     gene            13935..14735
                     /gene="yigL"
                     /locus_tag="MOX77_000983"
     CDS             13935..14735
                     /gene="yigL"
                     /locus_tag="MOX77_000983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar/pyridoxal phosphate phosphatase YigL"
                     /protein_id="HCA3356600.1"
                     /translation="MYQVVASDLDGTLLSPDHTLSPYAKETLKLLTARGIHFVFATGR
                     HHVDVGQIRDNLEIKSYMITSNGARVHDTDGNLVFTHNLDSDIASDLFGVVNANPDIV
                     TNVYRDDEWFMNRHRPDEMRFFKEAVFNYSLFEPALLEPEGVSKVFFTSDTHEKLLPL
                     EQAINARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAQAMGYSLKECIAFGDGMND
                     AEMLTMAGKGCIMGNAHQRLKDLYPELEVIGINADNAVPHYLRDLFLR"
     gene            14816..15715
                     /locus_tag="MOX77_000984"
     CDS             14816..15715
                     /locus_tag="MOX77_000984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HCA3356601.1"
                     /translation="MALLIITTILWAFSFSLFGEYLAGHVDSYFAVLIRVGLAALVFL
                     PFLRTRGHNLKTISLYMLVGAMQLGIMYMLSFHAYLYLTVSELLLFTVLTPLYITLIY
                     DVMSQRRLRWGYAFSALLAVIGAGIIRYDRVTDHFWVGLLLVQLSNISFAIGMVGYKR
                     LMETRPMPQHNAFAWFYLGAFLVAAVAWSLLGNAQKLPETTLQWSILVFLGVVASGIG
                     YFMWNYGATQVDAGTLGIMNNMHVPAGLLVNLAIWHQQPHWPSFITGAAVILASLWVH
                     RKWVAPRSAQTADDRRRDPASSE"
     gene            complement(15603..16556)
                     /gene="metR"
                     /locus_tag="MOX77_000985"
     CDS             complement(15603..16556)
                     /gene="metR"
                     /locus_tag="MOX77_000985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator MetR"
                     /protein_id="HCA3356602.1"
                     /translation="MIEIKHLKTLQALRNSGSLAAAAAVLHQTQSALSHQFSDLEQRL
                     GFRLFVRKSQPLRFTPQGEVLLQLANQVLPQISRALQACNEPQQTRLRIAIECHSCIQ
                     WLTPALENFRASWPQVEMDFTSGVTFDPQPALQQGELDLVMTSDILPRSGLHYSPMFD
                     FEVRLVLAPDHPLASKTQITPEDLASETLLIYPVQRSRLDVWRHFLQPAGISPLLKSV
                     DNTLLLIQMVAARMGIAALPHWVVESVERQGLVVTKTLGDGLWSRLYAAVRDGDQRQA
                     VTEAFIRSTRDHACDHLPFVRSAERPIFDAPTAKPGSQPRL"
     gene            16805..19069
                     /gene="metE"
                     /locus_tag="MOX77_000986"
     CDS             16805..19069
                     /gene="metE"
                     /locus_tag="MOX77_000986"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HCA3356603.1"
                     /translation="MTILTHTLGFPRVGLRRELKKAQESYWAGNTTREALLAVGRELR
                     ARHWEQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNNDGSVDIDTLFRIGRG
                     RAPTGEPAAAAEMTKWFNTNYHYIVPEFSKGQQFRLTWTQLLEEVDEALALGHKIKPV
                     LLGPVTYLWLGKVKGEPFDRLTLLKDILPVYQHVLAELAKRGVEWVQIDEPALVLELP
                     QAWLDAFKPAYDALAGQVKLLLTTYFEGVTPNLDTIIVLPVQGLHVDLIHGKDDVVEL
                     HQRLPVDWLLSAGLINGRNVWRADLTEKYAQINAIVGKRALWVASSCSLLHSPIDLSV
                     ETRLDTEVKSWFAFALQKCGELALLRDALNSGETAALEEWSVPIQARRHSHRVHNAAV
                     EKRLAAITAQDSQRENPYEVRAEAQRARFKLPAWPTTTIGSFPQTTEIRGLRLDFKKG
                     NLDANNYRTGIAEHIKQAIIEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGW
                     VQSYGSRCVKPPVVIGDISRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPRE
                     DVTRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLRRSDWDAYLEWGVEA
                     FRINAAVAKDETQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEAFDY
                     PNEIGPGVYDIHSPNVPSVEWIEALLKKAAQRIPAQRLWVNPDCGLKTRGWPETRAAL
                     ANMVKAAHNLRQAK"
     gene            19452..20750
                     /locus_tag="MOX77_000987"
     CDS             19452..20750
                     /locus_tag="MOX77_000987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001785009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic sulfatase maturase"
                     /protein_id="HCA3356604.1"
                     /translation="MAVAGCHVMAKPGGAICNIDCTYCFYLEKEALYPERNKNWRMSD
                     ETLEQFIRQHIAAQSGDRIDFAWQCGEPTMMGLPFFRRVVALCEKYGDGRKITHALQT
                     NGILVNDEWARFFAEQHFLIGLSIDGPASLHNHYRLNRAGKGTHEQVVAAMARLKAHH
                     VDFNTLTVVGKHNVGHAADVYEFLLAAGSRFIQFIPLVERMSTDNSSVLNLVMPGESA
                     AKLAPWTVPSWQYGEFLNQIFDIWVRRDVDRVYVQMFDVALAAWTAQQPVLCVHSETC
                     GHAFALESNGDLYNCDHFVYPEHLLGNIHQHSIKTLNNSERAIAFGEAKRETLTADCR
                     RCDYRFACHGGCPKHRFAVSPSGHPAHNYLCTGYKHFFQHVTPYMNVWRELLAQGYPM
                     ASIMRWLAQDARKDTGAVSRNHLCPCGSGKKYKNAVVKHS"
     gene            complement(20826..21638)
                     /locus_tag="MOX77_000988"
     CDS             complement(20826..21638)
                     /locus_tag="MOX77_000988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HCA3356605.1"
                     /translation="MTTTHPSGFAPAASPLAPTMIHTPDGAISAGITSIPSQGDDMPA
                     YYARPKASDGALPVVIVVQEIFGVHEHIRDICRRLALEGYLAIAPELYFREGDPNDFA
                     DIPTLLSGLVAKVPDSQVLADLDHVASWASRNGGDAHRLMITGFCWGGRITWLYAAHN
                     PQLKAAVAWYGKLVGDTSLNSPKHPVDIATDLNAPVLGLYGGQDTSIPQESVETMRQA
                     LRAANAKAEIVVYPDAGHAFNADYRPGYHEASAKDGWQRMLEWFAQYGGKKG"
     gene            21897..22658
                     /gene="udp"
                     /locus_tag="MOX77_000989"
     CDS             21897..22658
                     /gene="udp"
                     /locus_tag="MOX77_000989"
                     /EC_number="2.4.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine phosphorylase"
                     /protein_id="HCA3356606.1"
                     /translation="MSKSDVFHLGLTKNDLQGAQLAIVPGDPERVEKIAALMDKPVKL
                     ASHREFTSWRAELDGKAVIVCSTGIGGPSTSIAVEELAQLGIRTFLRIGTTGAIQPHI
                     NVGDVLVTTASVRLDGASLHFAPMEFPAVADFACTTALVEAAKSIGATTHVGVTASSD
                     TFYPGQERYDTYSGRVVRRFKGSMEEWQAMGVMNYEMESATLLTMCASQGLRAGMVAG
                     VIVNRTQQEIPNAETMKQTESHAVKIVVEAARRLL"
     gene            22798..24228
                     /gene="rmuC"
                     /locus_tag="MOX77_000990"
     CDS             22798..24228
                     /gene="rmuC"
                     /locus_tag="MOX77_000990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HCA3356607.1"
                     /translation="MDITLMISAVVALAAGAVIGWLATKAHADQIRADLIEERRELDI
                     ELSAARQQLAQEAHWRSECELLNNELRSLHSINTSLEADLREVTTRLEATQQHAEDKI
                     RQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLTPLREQLDGFRRQVQES
                     FGKEAQERHTLAHEIRNLQQLNAQMAQEAINLTRALKGDNKAQGNWGEVVLARVLEAS
                     GLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYT
                     REAALQEHIASVRNHIRLLGRKDYQQLPGLRSLDYVLMFIPVEPAFLLALDKQPELIT
                     EALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQHIADRASKLYDKMRLFVDDMSA
                     IGQSLDKAQDNYRQAMKKLASGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVTQDEE
                     YRLRSIPEGRQDEHYPNDERVKQQLS"
     gene            24324..25079
                     /gene="ubiE"
                     /locus_tag="MOX77_000991"
     CDS             24324..25079
                     /gene="ubiE"
                     /locus_tag="MOX77_000991"
                     /EC_number="2.1.1.163"
                     /EC_number="2.1.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HCA3356608.1"
                     /translation="MVEDSQETTHFGFQTVAKEQKADMVAHVFHSVASKYDVMNDLMS
                     FGIHRLWKRFTIDCSGVRRGQTVLDLAGGTGDLTAKFSRMVGETGKVILADINDSMLK
                     MGREKLRNIGVIGNVEYVQANAEALPFPDNTFDCITISFGLRNVTEKEKALRSMFRVL
                     KPGGRLLVLEFSKPIIEPLSKAYDAYSFHILPRIGSMVANDADSYRYLAESIRMHPDQ
                     DTLKAMMQDAGFESVDYYNLTAGVVALHRGYKF"
     gene            25089..25694
                     /gene="ubiJ"
                     /locus_tag="MOX77_000992"
     CDS             25089..25694
                     /gene="ubiJ"
                     /locus_tag="MOX77_000992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis protein UbiJ"
                     /protein_id="HCA3356609.1"
                     /translation="MPFKPLVTAGIEGLLNTFLYRSPALKSARTRLQGKVLCVKLKGF
                     STPLVLVFSERQVDVLGAWEGEADCTVITQASVLPKLRDRQQLAALIRSGELEVQGDI
                     QVVQNFVALADLAEFDPAELLAPYTGDIAAESIGKVVRGGAKFLRHGFQRQQRYAAEA
                     ITEEWRMAPGPLEVAWFAEETAAVERAVDSLTTRLEKLGAK"
     gene            25691..27331
                     /gene="ubiB"
                     /locus_tag="MOX77_000993"
     CDS             25691..27331
                     /gene="ubiB"
                     /locus_tag="MOX77_000993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis regulatory protein
                     kinase UbiB"
                     /protein_id="HCA3356610.1"
                     /translation="MTPGEVRRLYFIIRTFLSYGLDELIPRMRLTLPLRLWRYSLFWM
                     PNRHKDKLLGERLRLALQELGPVWIKFGQMLSTRRDLFPPQIADQLALLQDKVAPFDG
                     RLAKAQIEEAMGGLPVEAWFDDFDIQPLASASIAQVHTARLKSNGKEVVIKVIRPDIL
                     PVIQADLKLIYRLARWVPRLLPDGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRR
                     NFENSPMLYIPEVYSDYCSQNMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVKVFF
                     TQVFRDSFFHADMHPGNIFVSHEHPENPQYIGIDCGIVGSLNKEDKRYLAENFIAFFN
                     RDYRKVAELHVDSGWVPPDTNVEDFEFAIRTVCEPIFEKPLAEISFGHVLLNLFNTAR
                     RFNMEVQPQLVLLQKTLLYVEGVGRQLYPQLDLWKTAKPFLESWIKDQVGIPALTRAL
                     KEKAPFWVEKMPEIPELVYDSLRQGKYLQHSVDKIARELQVNHVRQSQSRYLLGIGAT
                     LLLSGSFLLVNRPEWGLMPGWLMVGGVVVWLVGWRKTR"
     gene            27537..27791
                     /gene="tatA"
                     /locus_tag="MOX77_000994"
     CDS             27537..27791
                     /gene="tatA"
                     /locus_tag="MOX77_000994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatA"
                     /protein_id="HCA3356611.1"
                     /translation="MGGISIWQLLIVAVIVVLLFGTKKLGSIGSDLGASIKGFKKAMS
                     DDDAKQDKTSQDADFTAKSIADKQGEAKKEDAKSQDKEQV"
     gene            27795..28343
                     /gene="tatB"
                     /locus_tag="MOX77_000995"
     CDS             27795..28343
                     /gene="tatB"
                     /locus_tag="MOX77_000995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatB"
                     /protein_id="HCA3356612.1"
                     /translation="MFDIGFSELLLVFVIGLIVLGPQRLPVAVKTVAGWIRALRSLAT
                     TVQNELTQELKLQEFQDSLKKVEKASLENLTPELKASMDELRQAAESMKRTYSANDPE
                     QASDEAHTIHNPVVKGNETQHEGVTPAAAETQASAPEQKPEPVKANVPESTETASVAA
                     IDAEKKSAAPVVESSPSSSDKP"
     gene            28346..29125
                     /gene="tatC"
                     /locus_tag="MOX77_000996"
     CDS             28346..29125
                     /gene="tatC"
                     /locus_tag="MOX77_000996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatC"
                     /protein_id="HCA3356613.1"
                     /translation="MAVEDTQPLITHLIELRKRLLNCIVAVLLIFLALIYFANDIYHL
                     VAAPLIKQMPQGATMIATDVASPFFTPIKLTFMVSLILSAPVILYQVWAFIAPALYKH
                     ERRLVVPLLVSSSLLFYIGMAFAYFVVFPLAFGFLTHTAPEGVQVSTDIASYLSFVMA
                     LFMAFGVAFEVPVAIVLLCWMGITTPEDLRKKRPYILVGAFIVGMLLTPPDVFSQTLL
                     AIPMYCLFEIGVFCSRFYVGKRRTRDEDNEAETEKAEHTED"
     gene            29167..29949
                     /gene="tatD"
                     /locus_tag="MOX77_000997"
     CDS             29167..29949
                     /gene="tatD"
                     /locus_tag="MOX77_000997"
                     /EC_number="3.1.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462861.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' ssDNA/RNA exonuclease TatD"
                     /protein_id="HCA3356614.1"
                     /translation="MFDIGVNLTSSQFAKDRDDVVARAFAAGVKGMLLTGTNIHESQQ
                     ALKLARRYPHCWSTAGVHPHDSSQWSSASEDAIIALANQPEVVAIGECGLDFNRNFST
                     PQEQERAFQAQLQIAAELQMPIFMHCRDAHERFLALLDPWLDSLPGAILHCFTGSRQQ
                     MQACVDRGLYIGITGWVCDERRGLELRELLPFIPAEKLLIETDAPYLLPRDLTPKPTS
                     RRNEPAYLPHILERIALWRGEDPQWLAAMTDANARTLFEVVF"
     gene            complement(29957..30445)
                     /gene="rfaH"
                     /locus_tag="MOX77_000998"
     CDS             complement(29957..30445)
                     /gene="rfaH"
                     /locus_tag="MOX77_000998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription/translation regulatory transformer
                     protein RfaH"
                     /protein_id="HCA3356615.1"
                     /translation="MQSWYLLYCKRGQLQRAQEHLERQAVSCLTPMITLEKMVRGKRT
                     FVSEPLFPNYLFVEFDPEVIHTTTINATRGVSHFVRFGAHPAIVPSSVIHQLSIYKPE
                     GVVDPETPYPGDSVIITEGAFEGLKAIFTEPDGETRSMLLLNLLNKEVKQSVKNTGFR
                     KI"
     gene            30631..32109
                     /gene="ubiD"
                     /locus_tag="MOX77_000999"
     CDS             30631..32109
                     /gene="ubiD"
                     /locus_tag="MOX77_000999"
                     /EC_number="4.1.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-polyprenylbenzoate decarboxylase"
                     /protein_id="HCA3356616.1"
                     /translation="MDAMKYHDLRDFLTLLEQQGELKRITLPVDPHLEITEIADRTLR
                     AGGPALLFENPKGYAMPVLCNLFGTPKRVAMGMGQDDVSALREVGKLLAFLKEPEPPK
                     GFRDLFDKLPQFKQVLNMPTKRLRGAPCQQKIASGDDVDLTRLPVMTCWPDDAAPLIT
                     WGLTVTRGPHKERQNLGIYRQQLIGKNKLIMRWLSHRGGALDFQEWLAARPGERFPVS
                     VALGADPATILGAVTPVPDTLSEYAFAGLLRGTKTEVVKCLSNDLEVPASAEIILEGY
                     IEPGEMAPEGPYGDHTGYYNEVDNFPVFTVTHITQREDAIYHSTYTGRPPDEPAVLGV
                     ALNEVFVPILQKQFPEIVDFYLPPEGCSYRLAVVTMKKQYAGHAKRVMMSVWSFLRQF
                     MYTKFVIVCDDDVNARDWNDVIWAITTRMDPARDTVLVENTPIDYLDFASPVSGLGSK
                     MGLDATNKWPGETQREWGRPIVKDPEVTARIDAIWDELAIFK"
     gene            32195..32896
                     /gene="fre"
                     /locus_tag="MOX77_001000"
     CDS             32195..32896
                     /gene="fre"
                     /locus_tag="MOX77_001000"
                     /EC_number="1.5.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-flavin reductase"
                     /protein_id="HCA3356617.1"
                     /translation="MTTLSCKVTSVEAITDTVYRVRLVPDAAFSFRAGQYLMVVMDER
                     DKRPFSMASTPDEKGFIELHIGASELNLYAMAVMDRILKDREIVVDIPHGDAWLRDDE
                     ERPLILIAGGTGFSYARSILLTALARNPARDVTIYWGGREEKHLYDLSELEALSVNHP
                     NLRIEPVVEQPEEGWRGRTGTVLTAVLQDYGTLAGHDIYIAGRFEMAKIARDLFCHER
                     NAREDRLFGDAFAFI"
     gene            33150..34973
                     /locus_tag="MOX77_001001"
     CDS             33150..34973
                     /locus_tag="MOX77_001001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000669888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aryl-sulfate sulfotransferase"
                     /protein_id="HCA3356618.1"
                     /translation="MKFKYALTSLALSVAILSSVPSTAFAIGGASGAKVDYQVQGKIG
                     EVVMNPYDIAPLTAVIRNGGYQLRDVHVRIVPKENGQEIAYKVNNKYLLTYGGIPVFG
                     LYPDYVNTVEVEYTRIQGSKTENIKESYKMYAPPAYSESAGTKEEQSALFTIDVKKVS
                     PEFKDRLYLLNNTKDKSGNGTRTVWNNPTGGALEWNFTTANAIIDTSGDIRWFMNPSS
                     IYDLKSIYRAGVMMGFKQNQDGALSWGYGQRYVKYDIMGREIFNRRLPDNYNDFSHSM
                     DNAPNGHYFLRVASSNYKRPDGKNVRTVRDVIAEVDQNGVVVDEWRLFDILDPYRDVI
                     MKTLDQGAVCLNIDASQSGHTLSEEDLAALDSSDKFGDIVGSGAGRNWAHVNSVDYDS
                     EDDSIIISFRHQSAIIKIGRDKKVKWILGTPAGWKAPFNAAILTPVDSKGQKISCQES
                     GCEGDFDWTWTQHTAFKIDSKSKGDILYLSAFDNGDGRGLEQPAMQSMKYSRSVIYKI
                     DQKNKTVQQIWQYGKERGNEWFSPVTSITEYQTDKNSVFVYSATAGGEFDLSVGAFTS
                     LPNPYLEEFRWGEKEPAVEMQIHGARGYQAMPFSLTKALTE"
     gene            complement(35170..36333)
                     /gene="fadA"
                     /locus_tag="MOX77_001002"
     CDS             complement(35170..36333)
                     /gene="fadA"
                     /locus_tag="MOX77_001002"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase FadA"
                     /protein_id="HCA3356619.1"
                     /translation="MEQVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPS
                     LTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPHSVPAVTVNRLCGSSMQALHDAA
                     RMIMTGDAQVCLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGMMGLTAEMLSRLHGI
                     SREMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDADGVLKQFNYDEVIRPETTVEA
                     LSTLRPAFDPVSGTVTAGTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCD
                     PSIMGYGPVPASKLALKKAGLSASDIDVFEMNEAFAAQILPCIKDLGLMEQIDEKINL
                     NGGAIALGHPLGCSGARISTTLINLMERKDAQFGLATMCIGLGQGIATVFERV"
     gene            complement(36343..38532)
                     /gene="fadB"
                     /locus_tag="MOX77_001003"
     CDS             complement(36343..38532)
                     /gene="fadB"
                     /locus_tag="MOX77_001003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid oxidation complex subunit alpha FadB"
                     /protein_id="HCA3356620.1"
                     /translation="MLYKGDTLYLDWLEDGIAELVFDAPGSVNKLDTATVASLGQALE
                     VLEKQHDLKGLLLRSNKAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLP
                     VPTLAAVNGYALGGGCECVLATDYRLATPDLRIGLPETKLGIMPGFGGSVRLPRMLGA
                     DSALEIIAAGKDVGAEHALKIGLVDGVVKQEKLIEGAIAVLRQAITGDLDWRAKRQPK
                     LEPLKLSKIEAAMSFTIAKGMVAQTAGKHYPAPMTAVKTIEAAARFGREEALNLENKS
                     FVPLAHTNEARALVGIFLNDQYVKGKAKKLTKDIETPKQAAVLGAGIMGGGIAYQSAW
                     KGVPVIMKDINDKSLNLGMTEAAKLLNKQLERGKIDGLKLAGVISTIHPTLDYAGFDR
                     VDVVVEAVVENPKVKKAVLAETEQKVRPETVLASNTSTIPIGELASALERPENFCGMH
                     FFNPVHRMPLVEIIRGEKSSDETIAKVVAWASKMGKTPIVVNNCPGFFVNRVLFPYFA
                     GFSQLLRDGADFRKVDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPQRMQK
                     EYRDAIDALFDASRFGQKNGLGFWRYKEDSKGKPKKEEDAAVDDLLASVSQTKRDFSD
                     DEIIARMMIPMINEVVRCLEEGIIASPAEADMALVYGLGFPPFHGGAFRWLDTQGSAK
                     YLDMAQQYQHLGPLYEVPEGLRDKTRHNEPYYPPVEPARPVGSLKTA"
     gene            38722..40053
                     /gene="pepQ"
                     /locus_tag="MOX77_001004"
     CDS             38722..40053
                     /gene="pepQ"
                     /locus_tag="MOX77_001004"
                     /EC_number="3.4.13.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020801804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro dipeptidase"
                     /protein_id="HCA3356621.1"
                     /translation="MESLAALYKNHIVTLQERTRDVLARFKLDALLIHSGELFNVFLD
                     DHPYPFKVNPQFKAWVPVTQVPNCWLLVDGVNKPKLWFYLPVDYWHNVEPLPTSFWTE
                     EVEVVALPKADGIGSQLPAARGNIGYIGPVPERALQLDIAASNINPKGVIDYLHYYRA
                     YKTDYELACMREAQKMAVSGHRAAEEAFRSGMSEFDINLAYLTATGHRDTDVPYSNIV
                     ALNEHAAVLHYTKLDHQAPSEMRSFLLDAGAEYNGYAADLTRTWSAKSDNDYAHLVKD
                     VNDEQLALIATMKAGVSYVDYHIQFHQRIAKLLRKHQIITDMSEEAMVENDLTGPFMP
                     HGIGHPLGLQVHDVAGFMQDDSGTHLAAPSKYPYLRCTRVLQPRMVLTIEPGIYFIES
                     LLAPWREGPFSKHFNWQKIEALKPFGGIRIEDNVVIHENGVENMTRDLKLA"
     gene            40053..40667
                     /locus_tag="MOX77_001005"
     CDS             40053..40667
                     /locus_tag="MOX77_001005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMPACT family protein"
                     /protein_id="HCA3356622.1"
                     /translation="MDSWLIPAAPVTVVEEIKKSRFITLLAHTDGVEAAKAFVELVRA
                     EHPDARHHCAAWVAGAPDDSQQLGFSDDGEPAGTAGKPMLAQLMGSGVGEITAVVVRY
                     YGGILLGTGGLVKAYGGGVNQALRQLATQRKTPLTEYTLQCEYGQLAGIEALLGQFAG
                     KIVSSDYQASVRLRVALPFAHVNAFSTKLADFSRGSLQLLAIEE"
     gene            40706..42157
                     /gene="trkH"
                     /locus_tag="MOX77_001006"
     CDS             40706..42157
                     /gene="trkH"
                     /locus_tag="MOX77_001006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004146450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trk system potassium transporter TrkH"
                     /protein_id="HCA3356623.1"
                     /translation="MHFRAITRIVGLLVILFSGTMILPGLVALIYRDGAGGAFTQTFF
                     VALAIGSILWWPNRREKGELKSREGFLIVVLFWTVLGSVGALPFIFSESPNLTITDAF
                     FESFSGLTTTGATTLVGLDSLPHAILFYRQMLQWFGGMGIIVLAVAILPVLGVGGMQL
                     YRAEMPGPLKDNKMRPRIAETAKTLWLIYVLLTVACALALWFAGMPAFDAIGHSFSTI
                     AIGGFSTHDASVGYFDSPTINTIIAIFLLISGCNYGLHFSLLSGRSLKVYWRDPEFRM
                     FIGVQLTLVVICTLVLWFHNIYDSALTTLNQAFFQVVSMATTAGFTTDSIARWPLFLP
                     VLLLCSAFIGGCAGSTGGGLKVIRILLLFKQGNRELKRLVHPNAVYSIKLGNRALPER
                     ILEAVWGFFSAYALVFIVSMLAIIATGVDDFSAFASVVATLNNLGPGLGVVADNFASM
                     NPVAKWILIANMLFGRLEVFTLLVLFTPTFWRE"
     gene            42169..42714
                     /gene="hemG"
                     /locus_tag="MOX77_001007"
     CDS             42169..42714
                     /gene="hemG"
                     /locus_tag="MOX77_001007"
                     /EC_number="1.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone-dependent protoporphyrinogen IX
                     dehydrogenase"
                     /protein_id="HCA3356624.1"
                     /translation="MKTLILFSTRDGQTREIASYLASELKEMGIWADVVNLHRAEEPD
                     WDSYDRVVIGASIRYGHYHSAFQEFVKKYATRLNGMPSAFYSVNLVARKAEKRTPQTN
                     SYARKFLMSSPWRPDYCAVIAGALRYPRYRWYDRLMIKLIMKMSGGETDTSKEVVYTD
                     WEQVAHFAREIAHLTNKSSAK"
BASE COUNT         9886 a        10825 c        11806 g        10217 t
ORIGIN      
        1 ctgctggctg aagaagtacg cgtggaatta ccgggcggtc ggctggatat cgcctggaaa
       61 ggtccgggtc atccgttata catgactggt ccggcggcac atatctacga cggatttatc
      121 catttatgaa gcaaccagag gaagaactac aggaaacgct cacggaactg gacgatcgag
      181 cggtcgtcga ttacctgcgc caccaccctg agttttttat ccgtaacgcc cacgccgttg
      241 aagcgatgcg tgttccacat cccgtgcggg gaacggtttc gctcgttgag tggcatatgg
      301 cccgcgcgcg taatcacatc aatgtgcttg aagaaaatat gacgctgctg atggaacagg
      361 ctcatgccaa tgaaagcctg ttttatcgct tgctgcatct gcaaagccgt ctggtcgccg
      421 cggatagtct ggatgagatg ctgatgcggt ttcaccgctg ggcgcgcgat ttggggcttg
      481 ccggcgcgac gctgcgtttg ttcccggatc ggtggcgtct tggcgcgcca tcgcgctata
      541 cgcatctggc tttaaaccgt caggccttcg agccgctgcg tattcaacga ctgggacagt
      601 cgcagcatta tcttggcccg ctaaacggcc cggaactgct ggtggtcttg ccggaggcga
      661 aggctgtagg gtcggtagcc atgtcgatga tgggcagcga tggcgacctc ggggtgattc
      721 tcttcagcag ccgtgacccg caccactatc agccggggca ggggacgcag cttttacagg
      781 agatcgcgct gatgctgccg gaactgctgg aacgctggat taaacgcgta tgacggaggt
      841 cgcgctttct ctggatgtct cgcggttcct gcgctattta ggcgtggagc gccagcttag
      901 ccccattacc ctgcagaact accagcgtca gcttgatgcc attatcgctt tagccggaga
      961 aaccgggctg aaaagctggc aacaatgtga cgctgcgatt gtgcgcagtt ttgcggtgcg
     1021 cagtcggcgt aaagggcttg gccctgccag tctggcgcta cgtctctcgg cattgcgaag
     1081 cttttttgac tggttagtca gtcagggcga attgaaagct aacccggcga agggcgtctc
     1141 cgcaccgaaa gcgccgcgtc atctgccgaa aaatattgat gtcgacgacg ttaaccgcct
     1201 gctggacatc gatcttaacg atccgctcgc cgtacgtgac cgggcgatgc tggaggtcat
     1261 gtacggcgcg gggctgcgtt tatccgaact ggttggcctg gatataaagc acctcgatct
     1321 cgataccgga gaagtgtggg taatgggtaa aggcagcaaa gagcgacgcc tgccgattgg
     1381 ccgtaacgcg gtgacgtgga ttgagcactg gctggatctg cgcggcctgt tcgccagcga
     1441 tgaagaggcg ttattcctgt cgaagctcgg caagcgtatc tccgcgcgca atgtccaaaa
     1501 acggttcgcc gaatggggca taaagcaggg gctaaacagc cacgtgcatc cacataagct
     1561 gcgccattcg ttcgcgaccc atatgctgga atcgagcggc gatctgcgcg gcgtgcaaga
     1621 gctgctgggt catgccaacc tttccaccac ccaaatttat actcatcttg attttcaaca
     1681 tcttgcttca gtgtacgacg cggcgcatcc gcgcgctaaa cgggggaaat aatgcgtttt
     1741 taccggcctt tggggcgtat tgccgcgctc acctttgacc tggatgatac cctttatgat
     1801 aaccgtccgg tgattttgcg tactgagcag gaagcgctcg cttttatgca aaattatcac
     1861 ccgtcgctac gttcgtttca aaacgtcgat ttacagcgga tacggcaggc ggtgcgtgaa
     1921 gcggagccgg aaatctatca tgacgttacc cgctggcgcc atcgcgcgat agagcaggcc
     1981 atgcgggatg cgggattatc ggcgcaggag tccattgccg gtgcgaatgc ggcgatgatg
     2041 cattttgcca aatggcgcag ccagattgag gttccgcagg ctacccatga gacgttacag
     2101 cagcttgcga aaaaatggcc gctggtggcg atcactaacg gcaatgccca gccggaactg
     2161 tttggcctcg gcgattactt taagtttgta ctgcgcgccg gcccggatgg acgttccaaa
     2221 ccgtttagcg acatgtattt cctggcggcg gaaaaactgc atgtgccgat cggcgagatc
     2281 ctgcatgtcg gcgacgatct gactaccgat gtggctggcg ctattcgctg tgggatgcag
     2341 gcctgctgga ttaaacctga aaatgccgac ctgatgcgga cgcaggacag ccgtttactg
     2401 ccgcatatcg aaatttcgcg gttggcatct ctcacctcgc tgatataatc accagtagtt
     2461 ctgtataaat tcccagttat tctggcggat ggcgctatgc ttatccgccc tacgataagt
     2521 agccccggta agcgaagcgc caccgggcgt ttttagtttt catgttttta cgcggcggtg
     2581 ccaatggacg tttcttacct gctcgacagc cttaatgata aacagcgcga agcggtggcc
     2641 gcgccacgta gcaacatgct ggtgctggcg ggcgcgggaa gcgggaaaac ccgcgtgctg
     2701 gtgcaccgta tcgcctggtt actgagcgta gaaaacaact cgccatactc catcatggcg
     2761 gtgaccttta ccaacaaagc ggcggcggaa atgcgccatc gtattggcca gttgatgggg
     2821 accagccagg gcggaatgtg ggtagggacg ttccacggtc tggcgcaccg cctgctgcgc
     2881 gcgcatcata tggacgctaa tttgccgcag gatttccaga ttctcgacag cgaagatcag
     2941 atgcgtttgc ttaaacgcct gattaaggcg atgaatcttg atgagaagca gtggccgccg
     3001 cgtcaggcga tgtggtacat caatagccag aaagacgaag ggctacgccc gcaccatatc
     3061 caaagctatg gcaatccggt ggaacagacc tggcagaagg tgtatcaggc ctatcaggaa
     3121 gcgtgcgatc gcgctggtct ggtggatttc gccgagctac tgctgcgcgc tcatgaacta
     3181 tggctgaaca agccgcacat cctgcaacac tatcgcgagc ggtttactaa cattctggtg
     3241 gacgaattcc aggataccaa caacattcag tacgcctggg ttcgtctgct ggcgggcgat
     3301 accggtaaag tgatgattgt cggcgacgat gaccagtcga tctacggctg gcgcggggcc
     3361 caggtagaga acatccagcg cttcctcaat gatttccccg gcgcgcagac cattcgtctg
     3421 gagcagaatt accgctcgac cagcaacatt cttagcgtgg cgaacgccct gattgaaaac
     3481 aacaacgggc gtctgggcaa aaagctgtgg actgacggcg ttgacggcga accgatatcg
     3541 ctgtactgcg ctttcaacga actggatgaa gctcgctttg tggttaatcg tatcaaaacc
     3601 tggcaggaca acggcggcgc gcttgcgcaa tgcgccatcc tttatcgcag caacgcccag
     3661 tcgcgcgtgc tggaagaagc gttattacag gccagtatgc cgtaccgcat ttacggcggt
     3721 atgcgcttct tcgaacgcca ggagatcaaa gatgcgctct cttatctgcg tttgattgcc
     3781 aatcgcaacg atgatgccgc ctttgaacgc gtggtgaata ccccaacgcg cggtatcggc
     3841 gaccgcacgc tggacgtggt gcgccagacc tcgcgcgatc gccagctaac attgtggcag
     3901 gcgtgccgtg aattgttaca ggaaaaagcc ctggccgggc gtgcggccag cgcgctgcaa
     3961 cgctttatgg aactgatcga cgccctggcg caggaaaccg ccgacatgcc gctgcatgtg
     4021 cagactgacc gggtgatcaa agattccggc ctgcgcacca tgtatgagca agaaaaaggc
     4081 gagaaaggcc agacgcgcat cgaaaactta gaggaactgg tgacggcaac gcggcagttc
     4141 agctacaacg acgaagatga agatttaatg ccattgcagg ccttcctctc tcacgcggcg
     4201 ctggaagcgg gcgaggggca ggcggatacc tggcaggatg cggtacagct gatgacgctg
     4261 cactcggcca aagggctgga gttcccgcag gtgtttatcg tcgggatgga agaggggatg
     4321 ttccccagcc agatgtcgct ggatgagggc tggcgtttgg aagaggagcg tcgtctggcc
     4381 tacgtcggcg ttacccgtgc catgcagaaa ctgacgctaa cctatgccga aactcgccgt
     4441 ctgtatggta aagaggttta tcatcgcccg tcgcgtttca tcggcgagtt gccggaggag
     4501 tgcgtggaag aggtccgtct gcgcgccacc gtcagtcgtc cggtgagcca tcaacgaatg
     4561 ggaacgccgc tggcggaaaa cgacacaggc tacaaactcg gccaacgcgt gcgccatgcg
     4621 aagttcggcg agggaactat tgtcaacctg gagggcagcg gcgaacatag ccggttgcag
     4681 gtggcttttc aggggcaagg gatcaaatgg ctggttgccg cgtatgcgaa gctggaaacg
     4741 gtttgaccgg ctctcatatt gccggatggc acctcttatc cggcctacgc gctggctaac
     4801 attttgattt gtaggccgga taaggcgaag ccgccatccg gcgatatatt gatgttaata
     4861 ttctgaaatc atagataaat actctcactc tgctaacctt tctgcataag gggaaattat
     4921 tgctttttcg cgtttcgttg cgtgttgacg gcaaattttt gctggcgtaa catgcgccca
     4981 cgattacgct aagaggacat tcgccttgga cacacccagt agatactggc tcattatcct
     5041 gtcatccagg atcaactcct aaggctatcc ctttttgctg atagccttag cggttgtcag
     5101 cgacctttca ttttttcccg tcgcgttgag tcaggctgtt taatggtctg aaacccaatt
     5161 tgtttctgtg tgcccatctg aactgtccga tatttttacg cattgggagt cccggtcatg
     5221 ctgagcgcat ttcaactgga aaaaaaccga ctgacccggc tggaagtcga ggagtcacaa
     5281 agcctgattg atgccgtatg ggtcgatttg gtcgaaccgg acgacgacga gcgattgcgc
     5341 gtacaatctg agctgggcca gagtctggcg acgcgtcctg aactggaaga tatcgaagca
     5401 tccgcgcgct tctttgaaga cgaagacgga ctgcatatcc actccttctt cttcttcgaa
     5461 gatgcggaag atcatgccgg taactctacg gtggcattca ctattcgcga tggccgtctg
     5521 tttacgctgc gtgaacgcga actgcccgcc ttccgtttgt atcgtatgcg cgcccgcagc
     5581 caggcgatgg tcgatggtaa tgcttacgaa ctactactcg atctgttcga aaccaaaatt
     5641 gaacagttgg cggatgaaat cgaaaacatc tacagcgatc tggaaaaact gagccgcgtc
     5701 attatggaag ggcatcaggg cgatgaatac gacgaagcgc tctccacgct ggcggaactg
     5761 gaagatatcg gctggaaggt acgcctgtgt ctgatggata cccagcgcgc gctgaacttc
     5821 ctggtgcgca aggcgcgctt accgggcgga cagctggagc aggcgcgtga gatcctgcgc
     5881 gatatcgaat ctctgctacc gcacaatgaa tcgctgttcc agaaggtgaa cttcctgatg
     5941 caggcggcga tgggtttcat caacattgaa cagaaccgca ttatcaaaat cttctcggtg
     6001 gtttccgtgg tgttcctgcc gccgacgctg gtcgcttcca gctatgggat gaacttcgag
     6061 tttatgccgg aactgaagtg gagctttggt tatccaggcg cgattatctt tatgattctg
     6121 gcggggcttg cgccgtatct gtactttaag cgcaagaact ggctgtaaga cattaaggcc
     6181 agggtgattc agctgcggct gaaccaccct gaaaagttac aggctccaag tattgatacc
     6241 tttaacctct ttttcataga accacttatt tgtattgacg ccgacataag ctgcgacaac
     6301 aagtccaagt atgttaacgc cgattaatgc tccaataaat attgcaacga tccctaataa
     6361 aataactata attgcttttt tccacagacc cagtacaaac aaataaatcc atgagaagaa
     6421 aaaggcaata aagtttattt gaatagtcaa ccgttgtcgg ggctttaatg ctttaaatgc
     6481 ctgtttatat tctgggctta ctttccaaaa tccagggaaa ccatgttgat cgtaaaatga
     6541 aaaacggtat ttccattttt cagataacga accatcatta atataatcct tgtccatgta
     6601 aactccatta aattacttgt tgagtgaatt cgaatccggg ggggccagaa gtagcagaga
     6661 aaaggttgca aaataccaga ttagaaaaag aggcatacca aagccatcgc aagcgaaatc
     6721 ttcagcaacc attatcacga aggaggcaat atagattaca agcgtacccc atacatagaa
     6781 ttttatatat tcaaagccac tgtctctgaa tcgctgacag tttaaattaa tgacgagata
     6841 atgtagtaaa attgtgaata aaattgccag tatcacaaag cttaaatata ataaaacccc
     6901 aaccaaaatg gaaaatatta tatttattag cgcgaatgat aataaataac gacatctgga
     6961 aacacatctc tcagatgaag gaataaaaac acttaacatt aatttcacat ccatatgttg
     7021 ggttacgtcg ttagcatgac aatatgctac cccccttaca aggggaggca tattttttca
     7081 gattatattt agaataatag tcgcgttatt ttttacgctg cgtataaatc gcatccatca
     7141 cgaaaatcgc cagcgcgacc cagataaacg caaatgtcac catcttatcc gcgcccggca
     7201 cttcgccata aaacgtcacc gccagtaaaa acatcagcgt tgggccgata tactggaaaa
     7261 agcccagtgt agaaagacgc agacgcgtag ccgctccggt aaagcacagc agcggaatcg
     7321 tagtgaccac acccgccgcc attaacagca agttcaacga tagtgcgttt tgccccatat
     7381 ggctggtggc gctatcggcg atgctaaaca gataaatcgc ggcgaccggc aacagccata
     7441 gcgtttcgac cagcataccc gtctgcgctt caacggcgat cttcttacgc accaggccgt
     7501 aaaacgcaaa actaaacgcc agccccagcg cgataatcgg cagcgagcca aaggtccaga
     7561 gttgcaccag cacgccgcac accgccagaa tcaccgccag ccactgcatt cgacggaagc
     7621 gttcgccaag aaaaatcatc cccagcaaga tgttaaccag cggattaatg aaataaccca
     7681 ggctggcctc cagcatatgg tgattattta ccgcccaaat gaacaatagc cagttaccgc
     7741 cgaccagtac ggcggacagg gccagcagga aaatcttctt tggcgttttc agtaaacgct
     7801 taacctgtcg ccactgccgg ctgacgctaa gcagcgccac cataaagaaa aatgaccaaa
     7861 tcacgcggtg cgtcaggatc tcatctgcgg gaacgtaata gatcagcttg aaatatgcgg
     7921 gggcgatccc ccaaataaaa taggcggcaa gagcgagtaa tacgccctgc cgtgtttgtt
     7981 ttgcgtccat ccggaaaact cgtatctgaa gtgtaacaac agtttacctg cttttatccc
     8041 accatataag tagcggtggc gctggcgatg tacagctgat cttcattgtg taattccacg
     8101 cgggcgacgg ccactttatt ccctgcgcgc agcaggctac tggtggccgt aaagcggttg
     8161 cctctgcccg gacgcaggta atcgacgcgc aggtcaatcg ttcccatccg cgacaggcgc
     8221 tggcgtagtt catcttcgct gatggtttcg tggcgagtta gcgtgctgcc gacgcatacc
     8281 agtccggcgg cgacatccag cgcagaggcg atcacgccgc cgtgtaaaat gctttgcgcc
     8341 cagttgccga ccatcatcgg ctggttgttg aaggccagtt gggcgaacgc tttttcatag
     8401 cgttccagct ccagccctaa cgcccgatta aacggcatgt ggtagacaaa catttcaccc
     8461 actaatttca gagcttgttc agcggtaagt acagcggaca tagattcctg atactccatt
     8521 ggttaatgaa atgttgatat tatgcttctt aattgttgtt ttctacttta agaagggata
     8581 actaacggct atgtgtgtaa atatgtaaaa atggttggca gagaatgatt caagctgaaa
     8641 atacttcgtc aggagaacgt caagaatgcg ggcgattttg agagggttgt tgccagccac
     8701 gctactgcca ttagcggcat atgcacaaga agctacgata aaagaggttc atgatgcgcc
     8761 tgcagtacgg ggaagtatca tcgctaacat gctacaggag catgataacc cttttacgct
     8821 ttacccttat gacacgaact acttgatcta cacgaacacc agcgatctga acaaagaggc
     8881 cataagtacc tacaactggt ctgaaaacgc acgtaaagat gaagtgaaat ttcagttgag
     8941 cctggcgttt ccgctgtggc gcggaatact ggggccgaac tcggtactgg gcgcttccta
     9001 tacgcagaaa tcctggtggc agctttccaa cagtaaagag tcttcgccgt ttcgcgaaac
     9061 caactacgaa ccgcagcttt ttcttggttt tgctaccgat tatcgctttg ccggctggac
     9121 gctgcgcgac gtagagatgg gctacaacca tgactctaac ggacgttcgg accccacctc
     9181 gcgtagctgg aaccgtctgt atacccgtct gatggccgaa aacggtaact ggctggtaga
     9241 ggtcaaacca tggtacgtga ttggcagtac cgacgataat ccggacatca ccaaatatat
     9301 gggttattac cagcttaaaa tcggttatca cctgggcgag gcggtattaa gcgccaaagg
     9361 ccagtacaac tggaatacag gctacggcgg cgcggaagtt ggattaagct atccggtcac
     9421 taaacatgtc cggctttata cccaggtgta tagcggctat ggcgaatcgc tgatcgacta
     9481 taattttaat cagacacgtg tcggcgtcgg cgtgatgctt aacgatatct tctgattgga
     9541 ttgtgtttta aacattgcag tttctctcgc aggcgctgaa aatagcgcct gttttgattt
     9601 atggtgaacg gggttaatgt ggcgcaggcg gaagtgttga atctggaatc aggggccaaa
     9661 caggttttgc aggaaacctt tggctaccaa cagtttcgcc cgggccagga agcgattatt
     9721 gatactgcgc tctccggtcg cgactgtctg gtcgtcatgc ccaccggcgg cggcaaatct
     9781 ctgtgctatc aaatccccgc gttgttgctg gacggattga ccgtcgtcgt ttcgcccctg
     9841 atctcgttga tgaaagacca ggtcgatcag ctactggcga acggggtggc ggcggcctgt
     9901 ctgaactcca ctcaaagccg cgagcagcag cttgaggtga tggcggggtg ccgtaccgga
     9961 cagattcgtc tgctgtatat tgcgccggaa cgcctgatgc tggacaactt tcttgatcat
    10021 ctggcgcact ggaatccggt attgctggcg gtggatgaag cgcactgtat ctcgcaatgg
    10081 ggacatgatt tccgtccgga atatgcggct ctcggtcagc ttcgccagcg ttttcccgct
    10141 ttgccgttta tggcattgac cgccaccgcc gacgacacca cgcgccagga tattattcgt
    10201 ctgcttgggc ttaacgatcc gttaatccag atcagtagct ttgaccgacc gaatatccgc
    10261 tacatgctga tggagaagtt taagccgctc gaccagctaa tgcgctatgt tcaggagcaa
    10321 cgcggcaaat cgggtatcat ctactgcaac agtcgggcga aagtggaaga taccgccgcg
    10381 cgcttgcaaa gtcgcggcat tagcgcggcg gcctatcatg cggggctgga aaacgctatt
    10441 cgcgccgatg tgcaggaaaa atttcagcgc gacgatctgc aaatcgtggt ggcgaccgtc
    10501 gcttttggaa tgggcataaa caaacctaac gtacgtttcg tcgtgcattt cgatatcccg
    10561 cgtaatattg aatcctacta tcaggaaacg ggccgcgccg ggcgcgacgg actgcctgcg
    10621 gaagccatgc tattttacga tccggctgat atggcctggc tacgtcgttg tctggaagag
    10681 aaaccagccg gacagcttca ggatattgaa cggcataagc tgaatgcgat gggcgctttt
    10741 gccgaagcgc aaacctgccg ccgcctggta ttgcttaatt actttggcga aggccgacaa
    10801 gaaccgtgcg gcaactgcga tatctgtctc gatccgccca aacaatatga tggcttaaac
    10861 gatgcccaga ttgcgctttc taccattggt cgggttaacc agcgttttgg catgggctac
    10921 gttgtcgagg tgatccgcgg cgcgaataac caacgcatcc gcgatttcgg tcatgacaaa
    10981 ctcaaggttt atggcatggg acgcgaaaag agccatgagc actgggtgag cgtgattcgc
    11041 cagctcattc atctggggct ggtaatgcaa aatattgcgc agcactccgc attacagttg
    11101 acggatgccg cgcgtccggt actccgtgga gacgttccgc taaagcttgc ggtgccgcgc
    11161 attgtcgccc tcaaaccccg cgtgatgcag aaatcgttcg gcggtaatta cgatcgcaaa
    11221 ttgttcgcta agttgcgcaa gctgcgtaaa gctatcgctg atgaagagaa tatcccgccg
    11281 tatgtggtct ttaacgacgc cacgttgata gaaatggcgg aacagatgcc ggtttccgcc
    11341 agcgagatgt taagcgttaa cggggttggg atgcgcaaac tggagcgctt cgggaaagaa
    11401 ttcatggcgc tcatccgcgc gcatgtcgat ggtgatgacg aagagtagtc agcccggcaa
    11461 aaaagtgcca ggatggtgac tcactgaact atttccccgc gagccatttt tatgttgatg
    11521 ctatttttca ccgtggcaat ggtgcacatc gttgcgctaa tgagccctgg ccccgatttt
    11581 ttcttcgtgt ctcaaactgc cgtcagccgt tcgcgtaaag aagcgatgat gggcgtactg
    11641 ggcatcacct gcggcgtgat ggtatgggcg ggcgtggcgc tgcttggcct gcatctcatc
    11701 atcgaaaaaa tggcctggct gcatacgatc attatggtag gcggcggcct gtacctgtgc
    11761 tggatgggct atcagatgct gcgcggcgcg ctgaaaaaac aggatgcggc ggcgtcttct
    11821 ccgcacattg aactggcgca gagcgggcgc agttttctca aagggctgct gaccaatctg
    11881 tcgaatccga aagcgattat ctattttggt tccgtttttt cactgtttgt cggcgataac
    11941 gtcggcgctg cggcgcgctg gggtattttc gcgttaatta ccctggaaac gctggcctgg
    12001 tttaccgtag tcgccagcct gttcgcgctg ccgaaaatgc gccgtggcta tcagcgtctg
    12061 gcgaaatgga ttgatggctt tgccggcgct ctgtttgcgg gctttggtat tcacctgatt
    12121 atttcgcgtt aatttacctc cgggccggat aaacatcatc cggcacgact atcacgcgtg
    12181 tcttgccgac gccaggagcg cgcctaccag cataaacaac gaaccaaacg ctttattcag
    12241 cgccttcatc tgctttggtc ctttaatcca ggcggcaatg cgctgcgcca gcgtggcgta
    12301 accggtcatc acaatcatat ccaccacaat cgtggtgacg ccgagaatga ggtactgcgc
    12361 cagttgcggt tgctgcggca tgatgaattg cggaaacagg gcggcaagaa agacaatact
    12421 tttgggattg gttagattga caaatatcgc ccgtttgaac agccgacccc gcgattgcgt
    12481 ctgggcgaga gtatgcagat cgatagcgcc tgcggcgcgc cattgctgga tacccagcca
    12541 gataagataa gccgcgccag cccatttcag aatttcaaaa gcgatgagcg agcgcgaaaa
    12601 gagcgtaccc agtccgacgc ccaccagtac gatatgtatc cccagcccgg tctggagccc
    12661 ggcgatagaa gccgctgcgc cacgatatcc atggttgata gacgtcgtca tggtattgat
    12721 ggcgcctgaa cccggagaaa gactcaacag agttgaggtc agtagatagg cgaaccacca
    12781 ttcaaaggtc atgcgaaact ccttggttgt ctgtttttgt gccacaatac gctactgccg
    12841 ctgtgttgtg tcaggcacga cgcaaaaaac gattttacct ggtaaacgag gccgaaaacc
    12901 cgatgtttca gcagcaaaat gactgggaaa caagagaaaa tgcgtttgcc gcttttgcta
    12961 tggggccgct gaccgatttt tggcgtcagc gggaagaggc ggagtttatc ggcgtggata
    13021 acattccggt gcgctttgtc cgttttcgga atgactccaa cgatcggacg atcgtcattt
    13081 gtcctggccg cattgagagt tatgtaaaat acgctgaact ggcgtatgac ctttttcatc
    13141 tcggttttga tatcttcatc atcgaccacc gtggtcaagg gcgctccggg cggatgttat
    13201 cggacccgca tcggggtcat gtcgatcatt ttaacgatta tgttgaggac ttagcggcgt
    13261 tctggcagca ggaaattgag ccggggtcgt ggcgtaagcg ttatatcctg gcgcactcaa
    13321 tggggggcgc gatagccacc ctgttcctgc aacgccatcg tgtgcggtgc gacgctattg
    13381 cgctcaccgc gccgatgttt ggtattgtga tacgcttgcc ttcctttatg gtgcgccata
    13441 ttctcgactg ggccgaaggg catcagcgta tccgtgaaga ttacgctatt ggtaccggtc
    13501 agtggcgggc gttgccgttt gggatgaatg cgctgaccca cagccgccag cgttatcagc
    13561 gcaacttacg attttatgcc gacgagccgc agctgcgcgt tggcggcccc acctggcatt
    13621 gggtacgcga aggcattctg gcgggtgagc aggtactggc tggggcgagc gatgacacga
    13681 cgcctacgct actgattcag gcggaagaag agcgggtagt ggataaccgc acccacgatc
    13741 gtttttgtga aattcgcgcc gcggcgggat acccttgtga agggggaaaa ccgctggtta
    13801 tcaaaggcgc gtaccatgag atcctttttg aaaaggacgc catgcgctca gtcgcgctta
    13861 acgccattgt tgaatttttc aacaagccta atttatccag cggaaatcgc tttgcttaga
    13921 ggttaaattt tattatgtat caggttgttg cgtctgattt agatggcacg ctgctctccc
    13981 ccgaccatac gttgtcccct tatgccaaag agactctgaa gctgttgacc gcacgcggca
    14041 tccattttgt ctttgccact ggtcgtcatc atgtcgatgt agggcaaatc cgcgataatc
    14101 ttgaaatcaa gtcttacatg atcacctcca acggcgcgcg agtgcacgat accgacggga
    14161 atttggtttt tacgcataat ctggacagcg acattgccag cgacctgttc ggcgtggtga
    14221 atgcgaaccc ggacatcgtg actaacgttt atcgcgacga cgaatggttt atgaatcgtc
    14281 atcgccccga tgaaatgcgt tttttcaaag aggcggtatt taactattcg ctgtttgagc
    14341 ctgcgctgct ggagccggag ggcgtcagca aagtgttttt caccagcgac actcatgaaa
    14401 agttgttgcc gctggagcag gcgattaacg cgcgctgggg cgatcgggta aacgtgagct
    14461 tctctacgct aacctgtctg gaagtgatgg cgggcggagt gtcgaaaggt catgcgctgg
    14521 aagcggtcgc tcaggcgatg gggtacagcc tgaaagagtg tatcgccttt ggcgacggaa
    14581 tgaacgacgc tgaaatgctc acgatggcgg gcaaaggctg catcatgggc aatgcgcacc
    14641 agcgtctgaa agacctgtat cccgaacttg aggtgatcgg catcaacgcg gataacgccg
    14701 tgccgcatta cctgcgcgat cttttcttac gctgatgtga ttgtttgtta gttgaccagt
    14761 tgtcaacctc actctccgct acaatgggtg ttccctgttt taagagacat ccattgtggc
    14821 gctactcatc atcaccacta tcctgtgggc tttctccttt agtctatttg gcgagtatct
    14881 tgccgggcat gtcgatagct atttcgcggt gctgatacgc gttgggctgg cggcgctcgt
    14941 ttttctgccg tttttgcgta ctcgcgggca caacctaaaa accatcagcc tgtatatgct
    15001 ggtgggggcg atgcagcttg gcatcatgta tatgttgagc ttccatgctt acctctacct
    15061 gaccgtatcc gaactgctgc tgtttaccgt tttgacgccg ctctatatca cgctgattta
    15121 cgatgtgatg agtcagcgtc gtttgcgctg gggctatgca tttagcgcgt tgctggcggt
    15181 gattggcgcc gggattattc gctacgatcg cgtgaccgac catttttggg tcggtttgct
    15241 cctggtgcag ctttctaata tcagtttcgc tatcggaatg gtggggtata aacgtctgat
    15301 ggagacccgt cccatgccgc agcacaacgc ctttgcgtgg ttctatctgg gggcgttttt
    15361 ggtggcggcg gtggcgtggt cgctgttggg gaacgcgcaa aagctgccgg aaaccacgct
    15421 gcaatggagc attctggtgt ttctcggcgt ggtggcgtcc ggcattggct actttatgtg
    15481 gaactatggc gctacccagg tagacgccgg gacgctgggt atcatgaata atatgcatgt
    15541 tcccgcagga ctgctggtta atcttgccat ctggcatcag cagccccact ggccaagctt
    15601 tattacaggc gcggctgtga tcctggcttc gctgtgggtg catcgaaaat gggtcgctcc
    15661 gcgctccgca caaacggcag atgatcgcag gcgtgatccc gcgtcgagcg aataaacgcc
    15721 tcggtcaccg cctgacgctg gtcgccgtcg cgcacggcgg catacaggcg gctccacaga
    15781 ccatcgccca gggttttggt caccaccaga ccctggcgct caacgctttc caccacccag
    15841 tgcggcaggg cggcaatacc cattctggcc gccaccatct gaatcagcag tagcgtatta
    15901 tccacgcttt tcagcagcgg actgataccc gccggttgca ggaaatgtcg ccagacatcc
    15961 agccggctgc gctgcaccgg gtaaatcaac agcgtttcgc tggctaaatc ttccggcgta
    16021 atctgcgttt tgctggccag cggatggtcg ggcgccagca ccagtcggac ttcaaaatca
    16081 aacatcggcg aataatgcag cccgctgcgc ggcaaaatat ccgacgtcat caccaaatcc
    16141 agctcgcctt gttgcaaggc cggttgcgga tcaaaagtga cgccggatgt gaaatccatt
    16201 tctacctgcg gccagcttgc acggaagttt tccagcgccg gggtcagcca ctgaatacag
    16261 ctatgacatt caatagcgat gcgcagacga gtttgctgcg gttcgttgca cgcctgcagc
    16321 gcacggctga tttgcggcag cacctggttt gccagttgca gcagaacttc cccctgcggc
    16381 gtaaagcgca gcggctggct tttacgcacg aacaggcgga agccaaggcg ttgttccaga
    16441 tcgctgaact gatgagacag agcggattga gtctggtgca gcaccgcagc agcagcagcc
    16501 agcgatccac tattccgcaa tgcctggagt gttttcagat gtttaatttc gatcatgaaa
    16561 gtccttcact tcgccatgaa caaattgcgc ttgaggaata tacagtacct ttacattatg
    16621 gatgtgtaaa catccagacg tctaaaactc gtcatatttc gacttgcaga tgcgttggct
    16681 tccttgctta ccccagtcac ttacttcagt aagctcctgg ggatgcgctg tgtcgccgcc
    16741 ttcctgcaag ccgaactatt tagagtttta ctttcagatt caataaaata agagaggaag
    16801 taaaatgaca atattgactc ataccctcgg ttttcctcgc gttggcctgc gtcgcgagtt
    16861 gaaaaaagcg caagagagct actgggcggg gaacacaacg cgtgaagcgt tactggcggt
    16921 gggccgcgaa ctgcgcgcgc gtcactggga gcagcagaaa caagcgggta ttgacctgtt
    16981 accggtaggc gactttgcct ggtacgacca tgttctgacc accagcctgc tgttaggcaa
    17041 tgtgccggct cgtcatcaga acaacgacgg ttccgtggac atcgacactc tgttccgcat
    17101 tggccgtggt cgcgcgccaa ccggcgaacc ggcggcggca gcggaaatga ccaaatggtt
    17161 taatactaac tatcactaca tagtaccgga gttcagcaaa ggccagcagt tcaggcttac
    17221 ctggacacag ttgctggagg aagtggacga agcgctggcg ctggggcata agatcaaacc
    17281 cgtactgctg gggcctgtca cgtatctgtg gctgggtaaa gtgaaaggcg agccgtttga
    17341 ccgcctgacg ttgctgaaag acattttgcc ggtgtatcag cacgtgctgg ctgagctggc
    17401 gaagcgtggt gttgagtggg tccaaattga tgagccagca ctggtgctgg aactgccgca
    17461 ggcgtggctg gatgccttca aaccggctta cgacgcgctc gccggccagg tgaagctgtt
    17521 gctgacgacc tattttgaag gcgtgacgcc aaacctggac actattatcg tgctaccggt
    17581 acaggggcta catgttgacc tcattcatgg caaagatgat gtagtggaac tgcatcaacg
    17641 tctgccggtc gactggctgc tctccgcagg cttgattaac gggcgtaatg tctggcgcgc
    17701 cgatttgacc gaaaaatacg cgcagattaa cgccattgtg ggcaaacgcg cgctgtgggt
    17761 agcatcctcc tgctctttac tgcacagccc gatcgatctc agcgtcgaaa cgcgtctgga
    17821 tacggaagta aaaagctggt ttgcctttgc gctgcaaaaa tgcggtgaac tggcgttgct
    17881 gcgcgatgcg ctgaacagcg gcgaaacggc ggcgcttgag gaatggagcg taccgattca
    17941 ggctcgtcgt cactcccatc gcgtacataa tgccgcagta gaaaaacgcc tggcggcgat
    18001 caccgcgcag gacagccagc gtgagaatcc gtatgaggtg cgcgctgaag cgcaacgcgc
    18061 ccgctttaaa cttcccgcct ggccgacgac gactatcggt tcgtttccgc aaaccacgga
    18121 aattcgcggc ctgcgtctgg acttcaaaaa gggcaacctc gacgcgaaca actaccgcac
    18181 cggcatcgcc gaacatatca aacaggctat catcgagcag gagcgtttag ggctggatgt
    18241 gctggtacac ggcgaagccg agcgaaacga catggtggaa tacttcggcg agcatctgga
    18301 cggcttcgtc tttacccaga atggttgggt gcaaagctat ggctcccgct gtgtgaaacc
    18361 gccggtagtg attggcgata tcagccgtcc ggcaccgatt accgtggagt gggcgaaata
    18421 tgcccagtcg ctgaccgaca agccggtaaa agggatgttg accggcccgg tgactattct
    18481 ttgctggtca ttcccccgcg aagacgtgac ccgcgaaacg attgcgaaac agattgcgct
    18541 ggcgctgcgt gatgaagtcg cggatctgga ggcggcgggg atcgggatta ttcagattga
    18601 cgaaccggcg ctgcgtgaag gtttaccgct gcgtcgcagc gactgggacg cctatctgga
    18661 atggggtgtg gaagccttcc gcatcaacgc ggcggtggcg aaggatgaaa cccagatcca
    18721 cacccacatg tgttactgcg agttcaacga cattatggat tcgatcgccg cgctggacgc
    18781 ggatgtgatc accattgaga cctcccgctc ggatatggag ttgctggagt cgttcgaagc
    18841 gttcgactac ccgaacgaaa tcgggccggg cgtgtacgat attcactcgc cgaacgtgcc
    18901 gagcgtcgag tggattgaag ccctgctgaa gaaggcggca caacgtattc cggcacaacg
    18961 cctgtgggtg aatccggact gcggtctgaa aactcgcggt tggccggaaa cccgcgcggc
    19021 gttagcgaac atggtcaaag cggcgcacaa tctgcgtcag gcgaaataac ccatcctgac
    19081 cgctgcgttt atccggcagc aatgcggcgc taccctttga cgggtagcgc ccgtgtctga
    19141 cctgattaac agcgcctctt tcttctcatt tccctttttc ttattttccg cgctgtcttt
    19201 ttcaggatct ggctatttgg cgatcttgat aataaaaagg ttctccgtat gaatgacaac
    19261 caggcggata gcgtccccgg aagcagcgcg gcggatttta ttgcctcgca gatcgttttt
    19321 cctgtcatga tcgcccagcg ctctcatagc acaaaacgag gttttccatt ctgttatgtt
    19381 ccctggcgac gataaacgtc gcattgtctc atggcgctgg tgaaccttat tttttaacgg
    19441 agatgtctga catggcggta gcaggttgtc acgtaatggc caaacccggc ggcgcgatct
    19501 gcaatattga ttgcacatat tgcttctatc ttgaaaaaga ggcgctgtac ccggaacgca
    19561 ataaaaactg gcgaatgtcg gacgagacgc tggaacagtt tatacgccag catattgccg
    19621 cgcagagtgg cgaccgcatt gactttgcct ggcagtgcgg cgaaccgacc atgatggggc
    19681 tgccattttt ccgccgggtt gtcgcattgt gtgaaaagta cggcgatggg cgaaaaatca
    19741 ctcatgcgtt acagacgaac ggcatcctgg tgaatgacga gtgggcgcgc tttttcgctg
    19801 aacagcattt tctcatcggt ctctctatcg acggtccggc gtcgttacac aaccactatc
    19861 ggcttaatcg cgctggaaaa ggaactcatg aacaggtcgt cgcagccatg gcgcggctta
    19921 aagcgcacca tgttgacttt aataccttaa ccgtcgtggg aaaacataac gtcggtcatg
    19981 cagcagacgt ctacgaattt cttctggcgg cgggatcgcg ttttattcag tttatcccgc
    20041 tggtagagcg aatgagcacc gataactcat cggtacttaa tctggtgatg cccggcgaaa
    20101 gcgcggcaaa gctggcgcca tggacggtac cgtcgtggca atatggcgaa tttctcaacc
    20161 agatctttga tatctgggtt cgtcgcgacg tagaccgcgt ctatgtgcag atgtttgacg
    20221 tggcgttagc cgcctggacg gcgcagcagc cggtactgtg tgtacattcc gagacttgtg
    20281 gacatgcctt cgcgttggag tcgaacggcg atctctacaa ctgtgaccac tttgtctacc
    20341 cggagcatct gctggggaat atccaccagc acagcatcaa aaccttaaat aatagcgagc
    20401 gggctattgc gtttggcgag gccaagcggg agaccctgac cgccgattgt cgtcgctgtg
    20461 actaccgctt tgcgtgtcat ggcggctgtc cgaagcatcg ctttgccgtc tcgccgtccg
    20521 gtcatcctgc gcataattac ttgtgtacgg gctataaaca ttttttccag cacgttacgc
    20581 cgtatatgaa tgtctggcgg gagctgctgg cgcaaggcta tccgatggca tcgatcatgc
    20641 gctggctggc gcaggacgcg cgtaaagaca caggagccgt cagtcgtaac catctctgtc
    20701 cctgcggcag cggcaaaaaa tataaaaatg ctgtggtaaa gcatagctaa cgtggcgatg
    20761 acgatttgtt gagcctacac cgactccggt ctcgtaggcc caacaaacat cgtaatgcgc
    20821 tgtggttagc cttttttccc accgtactgc gcgaaccatt ccaacattct ttgccagccg
    20881 tctttcgctg aggcttcgtg gtagcccgga cgataatcgg cattaaacgc gtgccctgca
    20941 tcgggataga ccacgatttc cgccttcgca ttagcggcgc gtagcgcctg acgcatggtt
    21001 tccacgctct cctgtggaat actggtatcc tgcccgccgt ataaacccag taccggcgcg
    21061 ttaagatcgg tggcgatatc aacgggatgc ttcggcgaat tgagtgacgt gtcgcccacc
    21121 agcttgccgt accacgctac cgctgctttt aactgtgggt tgtgcgcggc gtatagccag
    21181 gtaatccggc ctccccaaca aaaaccggtg atcatcagcc gatgcgcatc cccgccgttg
    21241 cgcgaagccc aactggcgac gtgatccagg tcggcaagga cttgcgaatc gggtacttta
    21301 gccaccagcc cgctcaataa tgtgggtata tcggcgaaat cattggggtc gccttcgcgg
    21361 aaatagagct ccggcgcgat agcgagatag ccttccagcg ccagtcgtcg gcaaatatcg
    21421 cgaatgtgtt catgtacgcc aaaaatttcc tgtaccacaa tgaccacagg cagcgcgccg
    21481 tcgcttgcct ttggtctggc gtaataggct ggcatatcgt cgccctgaga ggggatcgac
    21541 gttatccccg cgctaatggc cccatcaggt gtatgaatca tcgtaggggc aagtggggaa
    21601 gctgcaggtg caaagccgga tggatgtgtc gttgtcatgg tattctccgt acccttaaaa
    21661 aatagcgcaa tcttaactat agacagtgtg taacaaacca cattgcctta aagcggctat
    21721 cttttgtgca atgcttggcg atattgatta tttattgtga tgcacatcac tttttaatgg
    21781 taaacgagtg caattgtttt acgccatagt gatggctgtc acgaaaatat ctttatgcct
    21841 taggtaaagt gtctttttgc ttcttctgac aaacccgatt cacagaggag ttttatatgt
    21901 ccaagtctga tgtttttcat ctcggcctca ccaaaaacga tttacaaggg gcccagctcg
    21961 ccatcgtccc tggcgatcct gagcgtgtgg aaaagatcgc cgcgctgatg gataagccgg
    22021 ttaagctggc atctcaccgc gaattcacct cctggcgcgc tgagctggat ggtaaagcag
    22081 ttatcgtttg ctctaccggt atcggcggcc cgtctacctc tattgccgtg gaagaactgg
    22141 cgcaactggg tattcgtacc ttcttgcgta tcggcaccac gggggctatt cagccgcaca
    22201 tcaacgtcgg cgacgttctg gtaacgaccg catccgtacg tctggatggg gcaagcctgc
    22261 attttgcgcc gatggaattc ccggcggttg ccgactttgc ctgcaccacc gcgctggttg
    22321 aagccgcgaa atcgattggc gccacgactc acgttggcgt aaccgcctct tccgacactt
    22381 tctatccggg tcaggaacgt tacgacacct attctggccg cgttgttcgt cgcttcaaag
    22441 gctctatgga agagtggcag gcaatgggcg tgatgaacta cgaaatggaa tccgctacgc
    22501 tgttaaccat gtgcgcaagc cagggtttac gcgcaggtat ggtggcgggc gttatcgtta
    22561 accgtaccca acaagagatt ccgaatgcgg aaacgatgaa acaaactgaa agccacgcgg
    22621 tgaaaattgt cgtggaagcg gcccgtcgtc tgctgtaatt ctcctctctt ttgcaaaggc
    22681 cgacgcgttc ggccttttct ttttgcgtgg cgcctcgcag gaaatccctt ttaaactgga
    22741 cgtttataca gcacaattct attttgtgca ggacagtgtg gttccaggag aggtgttgtg
    22801 gatattactc ttatgataag cgccgtcgtg gcgctggcgg ctggggcggt gattggctgg
    22861 ctggcgacga aagcgcacgc cgatcaaatc cgcgccgatc ttatcgaaga acggcgtgag
    22921 ctggatattg aacttagcgc ggcccggcag caattagcgc aagaagcgca ctggcgcagt
    22981 gaatgcgagt tacttaataa cgaactgcgt agcctgcaca gtattaatac ctctctggaa
    23041 gccgatctgc gtgaagtcac gactcgtctg gaagcgactc aacaacacgc ggaagacaaa
    23101 atccgtcaga tgatcaacag cgaacagcgt ttaagcgagc agtttgaaaa tctggcgaac
    23161 cgtatctttg aacacagtaa tcgtcgcgta gacgaacaaa accgacaaag cctgaatagc
    23221 ctgctgacgc cgctgcgtga gcaactggac ggttttcgcc gccaggttca ggagagtttt
    23281 ggcaaagaag cgcaggagcg gcatacgctg gcgcacgaaa ttcgtaattt gcagcagctt
    23341 aacgcgcaaa tggcgcagga agcgatcaac ctgacgcgcg ccctgaaagg ggacaataag
    23401 gcacaaggaa actggggcga agttgtgctg gcgcgggtgc tggaggcatc cggactgcgt
    23461 gaaggctacg aatacgaaac ccaggtcagt attgagaacg atgcgcgctc gcggatgcag
    23521 ccggatgtca tcgtccgctt gccgcagggc aaagatgtgg tcatcgacgc taaaatgacg
    23581 ttagtcgcct acgagcgtta ctttaacgct gaagatgact atacgcgcga ggccgcttta
    23641 caagagcaca tcgcctcggt gcgcaatcat attcgcttac tggggcgtaa agactaccag
    23701 cagcttcccg gcctccgctc gctggactat gttctgatgt ttatccccgt agaacccgct
    23761 ttcctgctgg cgttagataa acagcccgaa ctgataaccg aggcgctgaa aaataacatt
    23821 atgctggtaa gccccacgac gctgctggtg gcgttacgga caatcgccaa cctgtggcgc
    23881 tatgaacacc agagccgcaa tgcgcagcac atcgcagaca gagccagtaa gctctacgat
    23941 aaaatgcggt tgttcgttga tgatatgtca gcgatcggtc agagtctgga taaagcgcag
    24001 gataactacc gccaggcgat gaaaaaactt gcgtcggggc gtggcaacgt tttggcgcag
    24061 gcggaggcct tccgggggct aggcgtggaa atcaaacgcg agattaatcc ggatttagcg
    24121 gaacaggccg ttacgcaaga tgaagaatat cgtttacgat cgatccctga agggcggcag
    24181 gatgaacatt atcccaatga tgaacgggtg aagcagcagt taagttaacc catacggagt
    24241 agtttagtcc tggcgcagag tagggcaaat tggcccaatc tgttacactt cttgaacatt
    24301 tttatcgata agcaggcact gagatggtgg aagattcaca agaaacgacg cactttggct
    24361 ttcagaccgt cgctaaagag cagaaagctg acatggtggc ccacgttttt cattctgtgg
    24421 cgtcaaagta cgatgtgatg aatgatttaa tgtcatttgg cattcatcgt ttgtggaagc
    24481 gcttcaccat tgattgcagt ggcgtgcgtc gtggacaaac cgttctcgat ttagcgggcg
    24541 ggacgggcga tcttaccgcg aaattttcac gtatggtcgg ggaaactggc aaagttatcc
    24601 tggcggatat taatgattct atgctcaaaa tggggcgtga gaagctgcgt aatatcggcg
    24661 tgatcggcaa cgtagagtat gtgcaggcga atgccgaagc tctgcctttc cctgataata
    24721 cgtttgattg cattaccatt tcgtttggtt tgcgcaatgt aacggaaaaa gaaaaagcgc
    24781 tgcggtcaat gttccgtgtg ttgaaacccg gcggacgttt actggtgctt gaattttcca
    24841 agcctatcat tgagccgctg agtaaagcgt atgacgccta ttctttccat attttaccgc
    24901 gtattggctc gatggtcgcg aacgatgcgg atagctatcg gtatctcgcg gaatccatcc
    24961 gtatgcatcc cgatcaggat accttaaaag ccatgatgca ggacgccgga tttgagagcg
    25021 tggattatta caatctgacg gcgggcgttg tggcattgca ccgtggttat aaattctagg
    25081 agggtggaat gccttttaaa cccttagtga ccgcaggaat tgaaggtctc ctcaatacgt
    25141 ttctgtatcg ttcgccagcg ctgaaatcag ccagaacgcg cttacaggga aaagtactgt
    25201 gtgtgaaact aaagggattt tcgacgccat tagtcctggt attcagtgaa cgccaggttg
    25261 atgtgctggg ggcatgggaa ggcgaagcgg actgtacggt aatcactcaa gctagcgttt
    25321 tgccaaaact acgcgatcgt cagcagttgg ccgcgcttat tcgcagcggc gaactggaag
    25381 tgcagggcga tattcaggtc gtgcaaaatt ttgtggcgct cgccgatctc gccgaattcg
    25441 atcctgcgga gctgttggcg ccatacacgg gtgatattgc ggcggaaagt atcggtaagg
    25501 tcgtgcgtgg cggggctaaa ttcctgcgcc acgggtttca acgccagcag cgttatgccg
    25561 ctgaagcgat cactgaagag tggcgtatgg cgcctggccc gctggaagtc gcatggtttg
    25621 ccgaagaaac cgcggctgtt gagcgcgccg tagattctct gaccacacgg ctggaaaaac
    25681 tgggggccaa atgacgccag gtgaagtacg gcgcctatat ttcatcatcc gcacgtttct
    25741 aagctacggc cttgatgaac tcatcccccg aatgcgtctt acactgccac tccgattatg
    25801 gcgctattcg ctgttctgga tgccaaaccg gcataaagat aaattgctgg gtgaacgatt
    25861 aagactggcg ttgcaagagc tgggaccggt ctggatcaaa tttggtcaga tgctctccac
    25921 gcgccgtgac ctgttcccgc cgcaaatcgc cgatcagctc gctttgctcc aggataaagt
    25981 cgcgccattc gatggtcggc tggcgaaagc ccagattgaa gaggcgatgg gggggctacc
    26041 tgtcgaagcc tggtttgacg actttgatat ccagccttta gcgtcggcgt caatcgccca
    26101 ggtacatacc gcgcgattga aatcaaacgg taaagaagtg gttattaagg tcattcgccc
    26161 ggatattttg ccggtaattc aggcagacct gaaactgatt tatcgccttg ctcgctgggt
    26221 accacgcctg ttgccggatg ggcgtcgtct gcgcccgacg gaagtggtgc gtgagtatga
    26281 gaaaacgctg atcgatgagc tgaatctgct gcgggaatcg gccaacgcga ttcagttacg
    26341 tcgcaatttt gaaaatagtc ccatgctgta tatcccggag gtgtactccg attactgtag
    26401 ccagaacatg atggtgatgg agcggatata tggcattccg gtttcggatg tggcggcgct
    26461 ggaaaagaac ggcaccaaca tgaaactgct ggcggaacgc ggagttaaag ttttcttcac
    26521 ccaggttttc cgcgacagct ttttccatgc ggacatgcat ccgggaaata tttttgtcag
    26581 tcatgaacac cctgaaaatc cgcaatatat cggcattgac tgcggtatcg tcgggtcgct
    26641 aaacaaagaa gataagcgtt atctggctga aaactttatc gcgtttttta atcgcgatta
    26701 ccgaaaggtg gcggagctgc atgtcgattc aggttgggtt ccgccagata ccaacgttga
    26761 agattttgag tttgccatcc gcaccgtctg tgaacctatt tttgaaaagc cgctcgcgga
    26821 aatctcgttt ggtcatgtgt tgttaaacct tttcaataca gcgcgtcgat ttaacatgga
    26881 agtccagccg caactggtgt tgttgcagaa aacattattg tatgttgaag gggttgggcg
    26941 gcaactttat cctcagcttg atttgtggaa aacggcgaag ccgtttcttg agtcctggat
    27001 caaagatcag gtgggtattc cggctctcac gcgggctctt aaagaaaaag cgccgttctg
    27061 ggtcgaaaaa atgccagaaa tacctgaact ggtgtacgac agtttgcgcc agggcaaata
    27121 tttacagcac agtgttgata agattgcgcg cgagttacag gtaaaccatg tgcgccaaag
    27181 tcagtctcgt tatttattgg gaattggcgc aacgctgtta ctgagcgggt cattcttact
    27241 cgtcaaccgc cctgaatggg gattgatgcc tggctggctc atggtcggcg gcgtagtggt
    27301 ctggctggtt ggctggcgta aaactcgttg agatttttta tcgctcaacg ccggttgtgt
    27361 cacgcaggta catattatca ctcgaggcaa tactcaggcc gcaagtcaat gtcgtcccgg
    27421 tcgtatgtaa aagtatgtga ataggacggg cgaaagcggc taacaaagag gcagcgcgaa
    27481 ggataatgtg tataatgcgg ccctaataat tcatcatcta tcacagagga acatgtatgg
    27541 gtggtatcag tatttggcag ttgttgattg ttgccgttat cgtcgtactg ctgttcggca
    27601 ccaaaaaact cggttccatc ggttccgatc ttggcgcgtc tatcaaaggc tttaaaaagg
    27661 ccatgagcga tgatgatgcc aaacaggata aaaccagtca ggacgctgat tttaccgcta
    27721 aatctatcgc ggataagcaa ggcgaagcga aaaaggaaga cgctaaaagc caagataaag
    27781 agcaggtata atccgtgttt gatatcggtt ttagcgaact gctgttagtg ttcgttatcg
    27841 gcctcattgt gttggggccg caacgattgc cagtagcggt aaaaacggta gcgggctgga
    27901 ttcgcgcgtt gcgctccctt gcgacaacgg ttcagaatga actgactcag gaactgaaac
    27961 ttcaggagtt ccaggacagt ctgaaaaaag tcgaaaaggc gagcctggaa aatctgactc
    28021 ccgaactgaa agcatctatg gatgaactgc gtcaggcggc ggagtcgatg aaacgcacct
    28081 acagcgctaa cgatcccgaa caagcgagcg atgaagcgca taccatccat aatccggtgg
    28141 taaaagggaa cgaaacgcag catgagggcg tcacccctgc cgccgctgaa acacaggcga
    28201 gcgcgccgga acaaaagccg gagcccgtta aagctaacgt gcctgagtcg acggaaaccg
    28261 cttccgtagc cgcgatagac gccgagaaga aatccgctgc gcctgttgtc gaatcttccc
    28321 cctcgtcgag tgataaaccg taaacatggc tgtagaagat actcaaccgc ttatcacgca
    28381 tctgatcgag ttgcgtaagc gcctgctaaa ctgcatcgtc gcagtacttc tgatttttct
    28441 ggcgttaatt tatttcgcca atgatattta tcatttagtc gccgcaccgc tgataaaaca
    28501 gatgccgcaa ggggcgacaa tgattgcgac ggatgtggcg tcgccgtttt ttacgcctat
    28561 caaactcacc ttcatggtgt ctttgatctt atccgcgcct gtcattttgt accaggtttg
    28621 ggcctttatc gccccggcgc tgtataaaca cgagcgtcgt ctggtcgtac cgctgctggt
    28681 atccagttcg ctgctttttt acattggtat ggccttcgcc tattttgtcg tattcccttt
    28741 ggcctttggt ttcctgacgc atacggcgcc ggaaggggta caggtttcga cagatatcgc
    28801 cagctatctg agctttgtca tggcgctttt tatggccttt ggcgtagcct ttgaggtgcc
    28861 ggtggcgatt gtgttgctgt gctggatggg catcaccacg ccagaagatt tgcgtaaaaa
    28921 acggccttat atcctggtcg gggcattcat tgtggggatg ctgcttacgc cgccagatgt
    28981 cttctcgcaa acgttgctgg cgataccgat gtactgcctg tttgaaattg gcgttttctg
    29041 ctcacgcttt tatgtcggta agcgacggac gcgcgacgaa gataacgagg ccgagaccga
    29101 aaaggccgag cacactgaag actaaacaca accgcccgcc agggcggttg tcatatgggg
    29161 gcaagcatgt ttgatattgg cgttaattta accagtagcc agtttgcaaa agatcgtgat
    29221 gatgtggtcg cccgtgcgtt tgcggcagga gtaaaaggta tgctactgac cggaacgaac
    29281 atccatgaaa gtcagcaggc gttaaaactg gcgcggcgct acccccattg ttggtcgacg
    29341 gctggcgtcc atccccatga cagcagtcag tggtcatctg cgtctgaaga cgccattatt
    29401 gcgctggcga accagccgga agtcgtcgct atcggtgagt gcgggctgga tttcaatcgc
    29461 aatttttcca cgccgcagga gcaggagcgt gcctttcagg cgcagctaca aattgccgcc
    29521 gaattgcaga tgccaatctt tatgcactgc cgggacgcgc atgagcgatt tctggcattg
    29581 cttgatccct ggctggatag tcttcctggt gcaatactgc actgctttac cggttcacgc
    29641 cagcaaatgc aggcctgtgt ggacagaggg ctctatatcg gtattaccgg gtgggtttgc
    29701 gacgaacgac gcgggcttga gctacgtgaa ctcttaccgt ttattccagc ggaaaagcta
    29761 ctgatagaaa ccgacgcgcc gtatctgttg ccccgcgatc ttacgccgaa accaacgtca
    29821 cgacgcaacg agcccgcata tctgcctcac atcctggagc gcatagcgct atggcgtggt
    29881 gaagatccgc aatggttagc ggcgatgaca gatgccaatg ccagaacctt atttgaggtc
    29941 gtattctgaa cgatcgctaa atcttgcgaa aaccggtgtt ttttacgctc tgcttcactt
    30001 ctttattgag taaattaagc agtaacatcg aacgcgtttc gccatccggt tcggtaaaaa
    30061 tcgctttcag cccttcaaat gcgccttccg tgatgatgac gctatcgccg ggataggggg
    30121 tttcaggatc gacaacgcct tcgggcttgt agatagaaag ctgatgaata acgctggaag
    30181 gcacgatcgc aggatgcgcg ccaaagcgca caaaatggct gacgccgcgc gtggcgttga
    30241 ttgtagtggt atgtatcact tccggatcaa attcaacgaa cagataatta ggaaagagcg
    30301 gttcgctgac gaaggtacgt tttccgcgta ccattttttc cagggtgatc atcggtgtca
    30361 ggcaacttac cgcttgtctt tcgaggtgtt cctgagcacg ctgaagttgc ccgcgtttgc
    30421 agtacagtaa ataccaggat tgcataatga ctcttatccg cttgttcggg gcgcaagcat
    30481 agcaaaagcc atgcgcgaag ttaattatac acttcatcct ttaagccgta tctggattag
    30541 cgttggttgc cagagttcac gctaatttaa caaaaataca gcatcccgat gatgaacgcc
    30601 gtataatgat gcgcttacca agaggctaca atggacgcca tgaaatatca cgatttacgc
    30661 gacttcctga cgctacttga gcagcagggg gaactaaaac gcatcacgct acctgtggat
    30721 cctcatctgg aaatcacgga aatcgctgac cgcacgctgc gtgccggtgg accggcgttg
    30781 ctgtttgaaa atcctaaagg ttacgccatg ccggtgctgt gcaacctttt tggcacgcca
    30841 aaacgcgtgg cgatgggcat ggggcaggat gatgtttccg ccttacggga agtgggtaaa
    30901 ttattagcgt ttctgaaaga acctgagccg ccgaaaggct ttcgcgatct gtttgacaag
    30961 ctgccgcagt ttaagcaagt gctgaatatg ccgacgaaac ggttacgcgg cgcgccttgc
    31021 cagcagaaaa tcgcgtctgg cgatgatgtc gatttaacgc gtcttcctgt catgacctgt
    31081 tggccggacg acgccgcgcc gctgattacc tggggactga cggtaacgcg tggcccgcac
    31141 aaagaacggc aaaacctggg catttatcgt cagcagttga taggtaaaaa taagctgatt
    31201 atgcgctggc tgtctcaccg cggcggcgcg ttggattttc aggagtggtt agccgcgcgt
    31261 ccgggtgaac gtttcccggt ctccgtcgca ttgggcgccg atccggcgac gatacttggc
    31321 gccgtgactc ctgttcccga tactctgtcg gagtatgcct ttgcgggcct gctgcgcggc
    31381 acgaaaactg aagtggttaa atgcctttct aacgatctgg aagtgcctgc cagcgccgag
    31441 attatccttg aaggttacat tgagccggga gagatggcgc cggaaggacc gtatggcgat
    31501 catacgggct attataatga agtggataac tttccggtct ttaccgtcac gcatattacg
    31561 cagcgtgagg atgccatcta tcactccacc tataccgggc gtccgcccga tgagcctgcg
    31621 gtattagggg tggcgctcaa tgaagtcttc gtgcctattc tgcaaaaaca gtttccggaa
    31681 atcgtcgact tttatctgcc gccggaaggg tgttcttacc gcctggcggt agtgacgatg
    31741 aaaaagcagt acgctggtca tgcgaaacgc gtcatgatga gtgtctggtc gtttttgcgc
    31801 cagtttatgt atacgaaatt tgttatcgtt tgcgatgatg acgttaacgc acgcgactgg
    31861 aatgatgtga tctgggcgat taccacccgt atggaccctg cgcgggatac ggtgctggtt
    31921 gaaaatacgc cgattgacta cctggatttt gcctcgccgg tctccgggct gggttcaaaa
    31981 atggggctgg atgccacaaa caaatggccg ggcgaaaccc aacgcgagtg gggtcgtcct
    32041 attgttaaag atcctgaagt taccgcgcgt attgatgcga tttgggatga gctggctatc
    32101 tttaaataac tgaaagcgga catcgacatt tcaggctgcg gcgactcggc ttgaaaaatg
    32161 tcggtattga cccgacaccc gacagaggga gcgcatgaca accttaagct gtaaagtgac
    32221 ctcggtagaa gctatcaccg ataccgtata tcgggttcgt ttagtgccgg acgcggcgtt
    32281 ttcattccgc gctggtcagt atttgatggt cgtaatggac gagcgtgaca aacgcccgtt
    32341 ttcgatggcc tcaacgccgg acgagaaagg gtttattgaa ttacacattg gcgcttccga
    32401 gctcaatctg tatgcgatgg cggtcatgga tcgaattctg aaagaccggg aaatcgtcgt
    32461 cgatattccg catggcgacg cctggctacg tgacgatgaa gagcgtccgt tgattctgat
    32521 cgcgggcggt acgggctttt cttatgcacg ctccatcctg ttgacggcgt tagcgcgcaa
    32581 cccggcccgc gatgttacca tttactgggg cggtcgcgaa gaaaagcacc tctatgatct
    32641 ctctgagctg gaagcactct ctgttaacca tcctaatttg cgtattgaac ctgttgtcga
    32701 gcagccggaa gaaggctggc gtggacgtac aggaacggta cttacggcgg tattgcagga
    32761 ttatggtacg ctggcggggc acgatattta tattgccgga cgttttgaga tggcgaaaat
    32821 cgcccgcgat ctgttctgtc atgagcgtaa tgcgcgggaa gatcgtctgt ttggcgatgc
    32881 gttcgcattt atttaactat tttatgggac gcagtagcgt ccctttttac gttagcctac
    32941 ctaaaagtcc tcttaaatat taattaatcg tcaactataa aaccttatga tattgaatat
    33001 ctacaggctt tgtattgcgt gtaataaatt aagtaatatt atgtcctgag gctatcaata
    33061 aaaatagtta attatatatg cttcatttat ttttataaaa gaaacataaa atggaaagtt
    33121 agttatttat ttataagatg gagagtgtta tgaaatttaa atatgcttta acttctctcg
    33181 cattatctgt tgcaattttg tcatcagtac cttctactgc tttcgccatc ggcggcgcca
    33241 gcggcgctaa agtggactat caggtccagg gaaaaattgg cgaagttgtt atgaacccct
    33301 atgatatcgc gccgctaacc gccgttattc gtaatggcgg ttaccagtta cgtgacgtgc
    33361 atgtgcggat tgtacccaaa gaaaatggcc aggagatcgc gtataaagtt aataataaat
    33421 accttttaac gtatggcggt attcccgtct ttggtcttta cccggattat gtcaataccg
    33481 ttgaagttga atatacaaga atccagggta gtaaaaccga aaatataaaa gaaagctata
    33541 aaatgtatgc accgcctgct tatagtgaat cagcgggtac aaaagaagaa caatcagcac
    33601 tctttactat cgatgttaaa aaggtttccc cagaatttaa agatcgcttg tatcttttga
    33661 ataatacgaa agataagtct gggaatggaa cgcgtactgt ctggaacaac cctactgggg
    33721 gtgcattaga atggaacttc actacagcta acgctattat cgacacctcc ggtgatattc
    33781 gttggtttat gaatccaagt tcaatttatg atttaaagtc aatttatcgt gctggcgtta
    33841 tgatgggctt taaacaaaac caggatggcg cactatcgtg gggctacggt cagcgttatg
    33901 tgaaatacga tatcatgggg cgtgaaatct tcaaccgccg cctgccggat aattataacg
    33961 atttttcaca ctcaatggat aacgcgccca acggtcacta cttcctgcgt gtagccagct
    34021 ctaactataa acgtcctgat gggaaaaatg ttcgtaccgt gcgtgatgtg attgccgaag
    34081 ttgatcagaa cggcgtggta gtggatgaat ggcgtctgtt tgatatcctc gatccttatc
    34141 gtgatgtgat aatgaaaacc ctcgatcagg gcgcagtgtg cctgaatatc gacgccagcc
    34201 agtccggcca tacgttgagc gaagaagatc tggcggcgct ggactcctcc gacaaattcg
    34261 gggatatcgt gggtagtggg gctggccgca actgggcgca tgtcaacagc gtcgactatg
    34321 acagtgaaga tgattccatc atcatcagct tccgccacca gagtgcgatt atcaaaatcg
    34381 gtcgcgataa gaaagtgaag tggatacttg gtacgcctgc tggctggaaa gcgccattta
    34441 atgccgcaat tctgacgcct gtggatagca aaggccaaaa aatttcctgc caggaaagtg
    34501 gctgtgaggg tgacttcgac tggacatgga cgcaacatac ggcctttaaa attgatagta
    34561 agagtaaagg cgatatctta tacctttccg ctttcgacaa tggtgatggc cgcggcttag
    34621 aacagcctgc tatgcagagt atgaaataca gccgctccgt gatttacaaa atcgaccaga
    34681 aaaacaagac agtccaacag atctggcaat acggtaaaga gcgcgggaac gagtggttta
    34741 gcccggtaac ctctatcacc gagtaccaga ctgacaagaa ttctgtgttc gtgtattccg
    34801 caacagcagg tggtgagttt gatttgtcgg taggcgcatt taccagcttg cctaacccgt
    34861 atctggaaga gttcagatgg ggagaaaaag agcctgcggt cgaaatgcaa atacatggtg
    34921 cgcgtggata tcaggctatg ccatttagcc tgaccaaagc gcttactgag tagagcaggc
    34981 cacacggtga aaaaacccgc ccctgacggg cgggaaaaac ggcaactaaa ctgttccccg
    35041 tcataactca cgctgcctct ttgttggctg cctttgttca ccccgggcat atagttatct
    35101 atgttcccgg ggattcgctc agttgccgcc gcgctgcaac gtgaattatt taggggacat
    35161 tatctttaat taaacccgct caaacaccgt ggcgatgccc tgacccagac caatacacat
    35221 cgtcgccaga ccaaactgcg cgtctttgcg ctccatcagg ttgataagcg tggtgctgat
    35281 acgtgctccg gagcagccga gcggatggcc aagcgcgatc gcgccgccgt tgaggttgat
    35341 cttctcgtct atctgctcca tcaatcccag atccttaatg catggcagga tctgtgcggc
    35401 aaacgcttcg ttcatctcaa acacatcgat atcgctggcc gacagtcccg cttttttcaa
    35461 cgccagtttt gacgccggaa ccggcccgta acccataatt gacggatcac aacccaccac
    35521 tgccattgag cgaatacggg cgcgaggttt cagacccagc tcacgggcac gactttcgct
    35581 cattaccagc atggcggctg cgccatcgga aagcgcggat gaggtgcccg ccgtgaccgt
    35641 gccactaacc ggatcaaatg ccggacgcag cgttgatagc gcttcgaccg tggtttccgg
    35701 gcggatcact tcatcgtagt taaactgctt caacacgccg tctgcatcat gaccgccagt
    35761 cgggataatc tccgttttga atgcgccaga ctgggtggcg gcccaggcgc gagcgtgaga
    35821 acgcgcggcg aactggtcct gcatttcccg gctaatgccg tgcaggcggg agagcatttc
    35881 cgccgttagc cccatcatcc ctgctgcttt ggcgacgttg cggctcagac ccgggtgaaa
    35941 atccacgccg tggctcatcg gcacgtgccc catatgctcc acgccgccaa ccagacaaac
    36001 ctgcgcatcg ccggtcatga tcattcgcgc tgcatcgtgt aacgcctgca tcgaggaacc
    36061 acacagacgg ttgacggtga ccgccggtac cgaatgggga atttctgcca gcagcgcggc
    36121 gttacgggca atgttgaagc cttgctccag cgtttgttgt acgcagcccc agtaaatatc
    36181 atcgagggtc gccgctgtaa gcgacggatt acgcgccagc aggctacgca ttaagtgggc
    36241 ggagagatct tctgcccgca cgttgcgaaa cgcgccgccc ttcgaacggc ccatcggggt
    36301 gcgaatggca tcgacaatga caacctgttc cattgtgact ccttaagccg ttttcagaga
    36361 accaaccgga cgggctggtt caaccggggg ataatacggt tcgttatggc gcgttttatc
    36421 acgcagccct tccggcactt catacagcgg gccgaggtgt tgatactgct gcgccatatc
    36481 aagatatttc gcgctgccct gtgtatccag ccagcggaat gcgccgccgt ggaacggagg
    36541 gaagcccagg ccgtagacca gcgccatatc ggcttccgcc gggcttgcga taatgccttc
    36601 ttccagacag cgaaccactt cgttaatcat cgggatcatc atacgggcga ttatctcgtc
    36661 gtcgctgaag tcgcgtttcg tctgactgac gcttgccagc aggtcatcca ccgcagcatc
    36721 ttcttctttc ttcggcttac ccttgctgtc ttctttatag cgccagaagc ccagaccgtt
    36781 tttttgccca aaacggctgg cgtcaaacaa tgcgtcgatc gcgtcgcgat actctttctg
    36841 catccgttgt gggaagcctg ccgccattac cgcctgcgcg tggtgggcgg tatcaatacc
    36901 caccacgtcg agcagatagg ccgggcccat cggccagccg aactgttttt ccatcacttt
    36961 atcgactttg cggaaatccg cgccgtcgcg cagcagttga ctgaaaccgg cgaaataggg
    37021 gaacagcacg cggttaacaa agaagccggg gcagttgttg actacaatcg gtgtcttgcc
    37081 cattttgctg gcccaggcga cgactttggc aatggtttcg tctgaactct tctcgccgcg
    37141 aatgatttca accagcggca tccggtgtac cgggttgaag aagtgcattc cgcaaaagtt
    37201 ttccggacgt tccagggcgc ttgccagttc gccaattggg atggtggagg tatttgaggc
    37261 cagcacggtt tctgggcgca ctttctgctc ggtttccgcc agtaccgctt ttttgacttt
    37321 cggattttcg actaccgctt cgacaacaac atctacgcga tcgaaaccgg cataatcgag
    37381 agtcgggtgg atggtcgaaa tgacgcccgc cagcttcaga ccgtcgatct tgccgcgctc
    37441 cagctgtttg ttcagcagct tggccgcttc ggtcatgccg aggttcaacg atttatcgtt
    37501 gatatctttc atgatgaccg gtacgccttt ccaggccgac tggtaagcga taccgccgcc
    37561 cataatgccc gcgcccagta cggctgcctg tttcggcgtc tcaatatctt tggtcagctt
    37621 tttggcttta ccttttacat attgatcgtt gaggaagata ccgaccagcg cacgagcctc
    37681 attggtatgc gccagcggaa caaagctttt attttccaga ttcagcgctt cttcacgacc
    37741 aaaacgcgcg gcggcttcaa tggttttcac tgcggtcatc ggcgccggat aatgtttacc
    37801 cgccgtttgt gcgaccatgc ctttagcgat ggtaaagctc atcgccgctt caattttgct
    37861 gagtttcaac ggttccagtt tcggctggcg tttagctctc cagtcgagat cgccggtaat
    37921 ggcctggcgt aacaccgcta tcgcgccttc aattagcttc tcttgtttga ccacgccgtc
    37981 cacaaggccg attttcagcg cgtgctcagc accgacatct ttacctgccg cgataatctc
    38041 cagcgcgctg tccgcgccca gcatacgcgg cagacgaacg gagccgccga aacccggcat
    38101 gatgcccagt ttagtttccg gcagaccgat acggaggtct ggcgtcgcca gacggtaatc
    38161 ggtcgccagc acgcattcac acccgccgcc cagcgcatag ccgtttacgg cggcaagggt
    38221 cggtacgggt aaatcttcca gacggttaaa gacgctatta gcgaaatgca gccattggct
    38281 taactgctct tcggggacga ggaacagtga aagaaattcg gtgatgtccg cgccgacaat
    38341 aaaggccgct ttattagagc gcagcagcag cccttttaaa tcgtgttgct tttccagcac
    38401 ctcaagcgcc tggccgaggc tggcgacggt tgcggtgtcg agtttattga ccgagcctgg
    38461 agcatcgaac accagttcgg cgatgccatc ttccagccag tcgaggtaca gggtgtcgcc
    38521 tttataaagc atgtcagtct cctgaatcca caaggtgatc tggtcgtatc agatgaagcg
    38581 aagtgtgtat tttgtgttaa taaaatgcaa ataaatgatt aaagaaatgc cgatgtgatc
    38641 acgctcggca gagatcacgc tctcgtgggg cgatgtgcta agatgcggaa acttgaggtc
    38701 aaaaaaacag aagggtaaaa aatggaatca ctggccgcgc tctataaaaa tcatattgtt
    38761 accttacaag aacggacgcg cgatgttctg gcgcgcttta agctggatgc gttacttatt
    38821 cattccggcg agcttttcaa cgtctttctc gacgatcacc cttatccgtt taaggtcaat
    38881 ccgcagttta aagcgtgggt gccggtaact caggttccaa attgctggct gctggtcgat
    38941 ggcgtcaaca aacccaaatt gtggttttat ctgccggtcg attactggca taacgttgaa
    39001 ccgctgccaa cgtcattctg gacagaagaa gtcgaggtcg tcgccttacc gaaagcggat
    39061 ggcatcggca gccaacttcc tgccgcgcgt ggcaatatcg gctatatcgg cccggttcct
    39121 gagcgcgcgc tacaattgga tatcgccgcc agcaacatca acccgaaagg tgttatcgac
    39181 tatctgcatt actaccgcgc ctataaaacg gattatgaac tggcctgtat gcgcgaagcg
    39241 cagaaaatgg cggtgagcgg tcatcgggcg gcggaagagg ccttccgttc cggcatgagc
    39301 gagtttgaca tcaacctggc gtacctgacc gccacgggac atcgcgatac cgatgttccg
    39361 tacagcaaca ttgtggcgct gaacgaacat gccgccgtgc tgcattacac gaaactggat
    39421 catcaggcac cgtctgaaat gcgcagtttc ctgctggatg cgggcgcgga atacaacggc
    39481 tacgcggcgg atctgacgcg gacctggtcg gcgaaaagcg ataacgacta cgcccacctg
    39541 gtgaaagatg ttaacgacga acagttggcg ctgatcgcta ccatgaaggc gggcgttagc
    39601 tatgtggatt atcatattca gttccatcag cgcatcgcaa agctgctgcg taagcatcaa
    39661 atcattaccg acatgagtga agaggcgatg gtggaaaatg atctcaccgg gccgtttatg
    39721 ccgcacggta ttggtcatcc gttgggtctg caggtacacg atgtggccgg gtttatgcag
    39781 gatgattccg gtacgcatct cgccgcgccg tccaaatacc cgtatctgcg ctgcacgcgt
    39841 gtgttacagc cgcgaatggt gttgaccatc gaaccgggga tttacttcat cgaatcgctg
    39901 ttagcgccgt ggcgcgaagg gccattcagc aagcacttca actggcagaa aattgaagcg
    39961 ctcaagcctt tcggcggtat tcgcattgaa gataacgtgg tcatccacga aaacggcgtg
    40021 gaaaacatga cgcgggattt aaaactggcg taatggacag ttggttaatc cctgcagcgc
    40081 cggtcaccgt tgttgaagag atcaaaaaaa gccgctttat tacgctattg gcgcataccg
    40141 atggcgtaga ggcggcgaaa gcgtttgttg agttagtcag agctgagcac cctgatgcgc
    40201 gccaccattg tgcggcgtgg gtggcgggtg cgccggacga ctcacaacaa ctgggctttt
    40261 cagacgacgg cgagccggcg ggaacggcag gcaagccgat gcttgcgcaa ttgatgggca
    40321 gcggcgtcgg agaaattact gccgtcgtcg tgcgctacta tggtggtatt ctgctgggta
    40381 cgggcgggct ggtaaaagcc tatggcggcg gtgtgaatca ggcattacgt cagcttgcca
    40441 cacaacgcaa gacgccatta accgaatata ctttgcagtg tgagtacggt cagttggccg
    40501 gaatcgaagc attattagga cagtttgccg ggaagatcgt ttccagcgat tatcaggcgt
    40561 ctgttcggct cagggtggcg cttccttttg ctcatgtgaa tgcattttcc acaaaactgg
    40621 cggattttag ccgtggttca ttgcaattgt tagcgattga agaataatcc ccacctcatt
    40681 tttaagaata aaggaagcgg cagagatgca ttttcgcgcc attacccgaa tcgttggact
    40741 actggttatc ttattttcgg ggacaatgat tctcccggga ctggtagcgc taatatatcg
    40801 tgatggcgca ggaggagcgt tcacgcagac cttttttgtc gcgctggcga tcggttccat
    40861 actgtggtgg ccaaatcgta gggaaaaggg cgagctgaaa tcccgcgaag gatttcttat
    40921 cgtggtgctg ttctggaccg tgctgggcag cgtgggtgcg ctgccgttta ttttctcgga
    40981 aagcccaaac ctcaccatta ccgatgcttt ttttgaatcg ttctccgggt taaccaccac
    41041 gggcgccact acgctggtgg ggctggattc attaccgcac gccattctct tttatcgtca
    41101 gatgctgcaa tggtttggcg gtatggggat cattgtgctg gcggtggcga ttctccctgt
    41161 cctcggcgtc ggggggatgc agctctatcg ggcagaaatg ccggggccgc tcaaagataa
    41221 caaaatgcgc ccgcgtattg ccgagacggc gaaaacgctg tggcttatct atgtcttgct
    41281 aacggtagcc tgcgcgctgg cgctatggtt tgcagggatg cccgcgtttg acgctatcgg
    41341 acacagcttc tccactatcg ctatcggcgg cttctcaacg catgacgcca gcgtaggcta
    41401 ttttgatagt cccactatta ataccatcat cgctattttc ctgctgatct ccggttgtaa
    41461 ctatggcctg catttctctt tattaagcgg gcgtagcctg aaggtatact ggcgcgatcc
    41521 ggaattccgc atgttcatcg gcgtacagtt gacgctggtg gtgatctgca cgctggtact
    41581 gtggttccat aatatctacg actcggcgct gacaacgcta aatcaggcgt tcttccaggt
    41641 tgtgtcgatg gcgacaacgg cagggtttac cacggacagc attgcgcgct ggccgctgtt
    41701 tttgcccgtc ttgctgctat gttccgcgtt tattggcggt tgcgccgggt caacgggcgg
    41761 ggggttaaag gtcatccgta ttctgttgtt atttaaacag gggaaccgcg aactcaaacg
    41821 tctggtgcat ccgaatgccg tttacagtat taagctgggg aaccgggcgc tgccagagcg
    41881 tattctggaa gccgtctggg gattcttttc tgcctacgcg ctggtattta tcgtcagtat
    41941 gctggccatt atcgctacag gcgtagatga tttctcggct ttcgcctcgg tagtggctac
    42001 gcttaataac ctgggaccgg ggctgggggt ggttgctgat aacttcgcca gtatgaatcc
    42061 ggttgcgaaa tggatactca tcgccaacat gctatttggt cgtctggaag tattcacttt
    42121 gctggtactt tttaccccga ctttctggcg tgaataatgg agtaacacgt gaaaacattg
    42181 attcttttct ctacccggga cggacaaacg cgcgaaattg cctcttatct ggcttctgaa
    42241 ctcaaagaga tggggatctg ggccgatgtc gttaatctgc atcgcgcaga agagcctgac
    42301 tgggatagct atgatcgcgt agtgattggc gcgtctattc gttatggtca ttaccacagc
    42361 gcctttcagg agtttgttaa gaaatatgcc acgcggttga acggaatgcc gagcgccttt
    42421 tattccgtta acctggtggc gcgtaaagct gaaaaacgga cgccgcagac taacagctac
    42481 gcgcgtaagt ttttaatgag ttctccgtgg cgacctgact actgtgccgt cattgcaggc
    42541 gcgcttcgct atccccgcta tcgctggtat gaccgtctga tgatcaagct tattatgaag
    42601 atgtcgggcg gcgaaacgga taccagtaaa gaagtggtgt acaccgactg ggagcaagtt
    42661 gcgcactttg cccgtgaaat agcccattta accaacaaat cgtcggcaaa ataaacgcaa
    42721 agaataaaaa gtgc
//
LOCUS       DAGWFR010000016        40407 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.016, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000016 DAGWFR010000000
VERSION     DAGWFR010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 40407)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 40407)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..40407
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.016"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..287
                     /locus_tag="MOX77_001008"
     CDS             <1..287
                     /locus_tag="MOX77_001008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="adenosylcobinamide-GDP ribazoletransferase"
                     /protein_id="HCA3356625.1"
                     /translation="VLLMYRHRYAREEGLGNVFIGKVSGRQTCITLGLAVIVATVLLL
                     GMQGLATMVVTLAAIFILGQLLKRTLGGQTGDTLGAAIELGELIFLLALL"
     gene            314..1384
                     /gene="cobT"
                     /locus_tag="MOX77_001009"
     CDS             314..1384
                     /gene="cobT"
                     /locus_tag="MOX77_001009"
                     /EC_number="2.4.2.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide--dimethylbenzimidazole
                     phosphoribosyltransferase"
                     /protein_id="HCA3356626.1"
                     /translation="MQTLHALFRDIPAPDAEAMARAQQHIDGLLKPPGSLGRLETLAV
                     QLAGMPGLNGTPQVGEKAVLVMCADHGVWDEGVAVSPKIVTAIQAANMTQGTTGVCVL
                     AAQAGAKVHVIDVGIDAEPIPGVVDMRVARGCGNIAVGPAMSRSQAEALLLEVSRYTC
                     DLAKRGVTLFGVGELGMANTTPAAAMVSVFTGSDAKEVVGIGANLPPSRIDNKVDVVR
                     RAIAINQPNPRDGIDVLSKVGGFDLVGMTGVMLGAARCGLPVLLDGFLSYSAALAACQ
                     IAPAVRPYLIPSHFSAEKGARIALAHLSMEPYLHMAMRLGEGSGAALAMPIVEAACAM
                     FHNMGELAASNIVLPEGNANAT"
     gene            1462..2391
                     /gene="ldtA"
                     /locus_tag="MOX77_001010"
     CDS             1462..2391
                     /gene="ldtA"
                     /locus_tag="MOX77_001010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HCA3356627.1"
                     /translation="MRRITPFFPFFVLLVSHFSLAISYPLPPEGSRLVGQPVTIAVPQ
                     NNTQPLESFAARYGQGLSNMLEANPGVDVFLPQSGSTLVVPQQLILPDTVREGIVVNV
                     AEMRLYYYPAGTNTVEVLPIGIGQAGRETPRNWVTAVERKQDGPVWVPTANTRREYAK
                     EGKTLPAMVPAGPDNPMGLYAIYIGRLYATHGTNANFGIGLRVSQGCIRLRNDDIKYL
                     FDHVPVGTRVQIIDRPVKFSVEPDGSRWLEVHEPLSRNRAEFESDKKVPLPVTPVLRT
                     FIKGDDVDTSRVNEVLERRSGMPVNISAGRSGL"
     gene            complement(2617..2692)
                     /locus_tag="MOX77_001011"
     tRNA            complement(2617..2692)
                     /locus_tag="MOX77_001011"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2657..2659),aa:Asn,seq:gtt)
     gene            2852..4309
                     /locus_tag="MOX77_001012"
     CDS             2852..4309
                     /locus_tag="MOX77_001012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EmmdR/YeeO family multidrug/toxin efflux MATE
                     transporter"
                     /protein_id="HCA3356628.1"
                     /translation="MWFQLSSLRSILNVSTALRQVVVRTPWYAKRKSYKVLFWREITP
                     LAIPIFLENTCVLLMGVLSTFLVSWLGKEAMAGVGLADSFNMVIMAFFAAIDLGTTVV
                     VAFSLGKRDRRRARAAARQSLVIMTLFAVVLAVVIHYFGSEIINIVAGEATPEVKGLA
                     LTYLELTVLSYPAAAIALIGSGALRGAGNTKIPLMINGGMNILNIVISSILIYGAFSW
                     QGLGFAGAGLGLTISRYIGAVAIIWVLMIGFNPALRIPLKSYLKPLNFGIIWEVMGIG
                     IPASIESVLFNGGKLLTQMFVAGMGTNVIAGNFIAFSVAALINLPGNALGSASTIITG
                     KRLGTGQIGQAERQLRHVFWMSTIVLTAIAWGTAPFAGLFASFYTQEQDVKEVVKVLL
                     WLNAAFMPIWAAAWVLPSGFKGARDVRFAMWVSMLGMWGCRVVAGYTLGIVLGMGVVG
                     VWLGMFLDWAVRGALFYWRLISGRWLWRYPRVKRE"
     gene            4450..4525
                     /locus_tag="MOX77_001013"
     tRNA            4450..4525
                     /locus_tag="MOX77_001013"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4483..4485,aa:Asn,seq:gtt)
     gene            4946..5409
                     /locus_tag="MOX77_001014"
                     /pseudo
     CDS             4946..5409
                     /locus_tag="MOX77_001014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002211098.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            5403..5729
                     /locus_tag="MOX77_001015"
     CDS             5403..5729
                     /locus_tag="MOX77_001015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1493 family protein"
                     /protein_id="HCA3356629.1"
                     /translation="MLDNIEQQVYELVRPYAGTYLFNIKQVELTPEIDLDTDLSIDEL
                     EAEDLMNKFFEKLNVERGNFRIETYFPNHPFSWHPFKKTEPVPVPDFTISMLIESAKA
                     GKWLYD"
     gene            complement(5718..5879)
                     /locus_tag="MOX77_001016"
     CDS             complement(5718..5879)
                     /locus_tag="MOX77_001016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_448416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytoplasmic protein"
                     /protein_id="HCA3356630.1"
                     /translation="MTAKEETKGVSVRAAAVNMNPLKRKENYLSATIIAQKEGYWYSH
                     LLSSLQLVI"
     gene            5925..7379
                     /locus_tag="MOX77_001017"
     CDS             5925..7379
                     /locus_tag="MOX77_001017"
                     /EC_number="3.2.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP nucleosidase"
                     /protein_id="HCA3356631.1"
                     /translation="MENKGTNLTPEQALDRLEELYEQSVNALREAIADYVDNGTLPDP
                     HARLNGLFVYPSLSVSWDGATPNPPKTRAFGRFTHPGCYTTTVTRPALFRAYLLEQLN
                     LVYHDYGAHIAIEASHHEIPYPYVIDGSALTLDRSMSAGLTRHFPTTELAQIGDETAD
                     GLFHPGEFYPLSHFDARRVDFSLARLRHYTGTPVEHFQPFVLFTNYTRYVDEFVRWGC
                     SQILDPDSPYIALSCAGGIWITAETEAPEEAISDLAWKKHQMPAWHLVTADGQGITLV
                     NIGVGPSNAKTICDHLAVLRPDVWLMIGHCGGLRESQAIGDYVLAHAYLRDDHVLDAV
                     LPPDIPIPSIAEVQRALYDATKAVSGMPGEEVKQRLRTGTVVTTDDRNWELRYSASAL
                     RFNLSRAVAIDMESATIAAQGYRFRVPYGTLLCVSDKPLHGEIKLPGQANRFYEGAIS
                     EHLQIGIRAIDLLRAEGDRLHSRKLRTFNEPPFR"
     gene            7469..7747
                     /locus_tag="MOX77_001018"
     CDS             7469..7747
                     /locus_tag="MOX77_001018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000600594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356632.1"
                     /translation="MILHPAKALLCRGFITIAGDLSPIIASTSGNAPEGENIAPHFTL
                     LERLDPQARINKQIPTVRIDQLKGIIRRLDTEDFRVGQGYRVVTPLSN"
     gene            8284..9147
                     /locus_tag="MOX77_001019"
     CDS             8284..9147
                     /locus_tag="MOX77_001019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000211445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356633.1"
                     /translation="MTTQKEMEEIRAALSWFDVRRYDGLKDLTLEQIYAELERRMLAY
                     KTRQQWETAGKDNQMQAIYHDATIRCGDVILKSDWISDNHRLSHSYAVRPMTRVQLFN
                     YGRAMYRLETSEQTDPVAVSSDYISEYLKQGGMNPANKMLIEIDLEEASSDDLAEHLK
                     VLIALWQKHLKTPKPPKRKFRFGHKTFERILDYKVIPLMDLISWEQLYNEGKNIPFTI
                     LADILHGNNGVRSSENIKDTDYDYAKSYLDNDEYFKVLNDFYIKNNMLKDWGIVDVIT
                     LNDKSSDKNKK"
     gene            9334..9549
                     /locus_tag="MOX77_001020"
     CDS             9334..9549
                     /locus_tag="MOX77_001020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001515480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlpA family transcriptional regulator"
                     /protein_id="HCA3356634.1"
                     /translation="MVQNKTDKHPKLIRLPEVKRRTGFGKTWIYTLIRAGKFPKQVKT
                     GLRSIAFIESEIDEWIYKIISDSRNHI"
     gene            9579..9890
                     /locus_tag="MOX77_001021"
     CDS             9579..9890
                     /locus_tag="MOX77_001021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001515481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356635.1"
                     /translation="MKSKNVLPCVVTVTNDETEVFMEMAINNFRKHLQVMIDCMGNDY
                     ERHFKDRLYIEEVIGKVIERTKREFAESMKDNKGKEYHLFLDEVRRNLRVIYSAYRTN
                     Y"
     gene            9905..10291
                     /locus_tag="MOX77_001022"
     CDS             9905..10291
                     /locus_tag="MOX77_001022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001515482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356636.1"
                     /translation="MNEKCLGWNEIPVKISASNAETANFATDVVNTYNELIHYLYFNL
                     SDDEFLKKMKDGFYREIFIMDIINLTLQEWFESAEEIKIKYISVPEVKTILSSYHEFL
                     IKCFNGDDYLLYYKRIEISANKQTVI"
     gene            10308..10595
                     /locus_tag="MOX77_001023"
     CDS             10308..10595
                     /locus_tag="MOX77_001023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004860207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356637.1"
                     /translation="MSEKLIKESQKVFMHMAGLFYEIKMNTLKEVRPDEAEMLMEDDA
                     FMDSIYKDCIKNASASFKKVVRWEYFEQGHSVKMVDKEVVLITLRVNHKRR"
     gene            10681..10974
                     /locus_tag="MOX77_001024"
     CDS             10681..10974
                     /locus_tag="MOX77_001024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000034418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356638.1"
                     /translation="MSKIFEIKSVSTETFYNIAERSFEASWKVMQDMASDNVSYLVYD
                     ADFMCVFIGNVIEHISKNFYIIIQCECLEGKLEEVNFEEVAERLVRHSWEFCK"
     gene            11087..11482
                     /locus_tag="MOX77_001025"
     CDS             11087..11482
                     /locus_tag="MOX77_001025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001548724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356639.1"
                     /translation="MNDVVLYEKNESMFFAICTVLSLYCDFIYEIAYGFHNEAVMIIE
                     NEKCVGQALKIQINNLFDDFDYYKKVNGTEKVKREDIDEKELFNKVMAAHNQGVKALI
                     MKNLEANLREKEEGSEYWKLKIFNRFNGI"
     gene            complement(11579..11872)
                     /locus_tag="MOX77_001026"
     CDS             complement(11579..11872)
                     /locus_tag="MOX77_001026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001515485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356640.1"
                     /translation="MTDHIKKEPEDETIIDSAKIYDALRKNYFDRCFLSSYLDEKIDD
                     NLHPFSDEAYNKMKSLHDERDNLNFKNKMKEIKRNLSTSQKKEVEKIMKNKIK"
     gene            12665..13309
                     /locus_tag="MOX77_001027"
     CDS             12665..13309
                     /locus_tag="MOX77_001027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001549354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356641.1"
                     /translation="MNKRLNMLYVNNINALNNYREKHSDNNLHGPLLLKLKNYFHQHN
                     KLMVIGQETYGWCNSPDINEQLETYEEFDFGVSYYSSPFWNIIRKVERALGIEPYAIA
                     WSNLNRFDVDCGSPDYTELARDISSFDYILKEEINILTPDICVFFTNHKYDYRLTSLY
                     EDLMFENINGLPEKHFVRLYHPDLPEYTIRAPHPKTIRIKGWENDFIKYIEAIK"
     gene            complement(13385..14896)
                     /locus_tag="MOX77_001028"
     CDS             complement(13385..14896)
                     /locus_tag="MOX77_001028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001549353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MobA/MobL family protein"
                     /protein_id="HCA3356642.1"
                     /translation="MAIFHLDFKIVKRSEGRSSVAKAAYHARTRITDERTGDTYDYSR
                     RTDLYGHFILAPANAPEHIVKDSTALWNEVEKVERQNNGQTSRYFDVAIPTELNNDDK
                     KKLVLEYCQKNFVDKGMIADIAFHDLDSDNPHAHVMLTLKAIGPEGFGKKERSWNDRK
                     MSVLWRESWASMANSYLEAAGSSERIDHRSLQAQHEEALEKAAAALDNEEQALWLAKA
                     AETNRPAMKRIHSAKWRSKAAQEQRAAEQAVRDAAKQEAVEVYKTFSELDLEIVVDVR
                     SFTITHLAEPEEIVLPETRSSSSTNEEQRPLLVAPAPDTRLRGVKSYRDKTKVSKVVA
                     CIPPSISISDSGTNTILKTSTSQNPNRASRSAPDHERKDKTTPRQDNIFKRFTTLVID
                     FFKEKFVWPRSSRVKHDPVSTEHDKRIAENYVFDEVLGHHVSRAEYEKQAKFNSDTYK
                     PTPDEIRRFPSRPKHERVNADNNMDFIPTVSTINDKNHTPRLRPPTRRGLDKL"
     gene            16553..17062
                     /locus_tag="MOX77_001029"
     CDS             16553..17062
                     /locus_tag="MOX77_001029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016240054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356643.1"
                     /translation="MESKTKKLRMGWIQNLTENEKKIIDDFLEEAAKLKGKALNKKEK
                     QTVKFIARDQVRSIRKEQKSKKQKKSRVDMEEKEDETINTISNNADEQGRLKILSAKE
                     RDFINNAIYEEMKIKGRKLVKCEMKEVLKIARKKILNNRISCQIKNERNKERFEAEFE
                     WRKPVPFRR"
     gene            17109..17624
                     /locus_tag="MOX77_001030"
     CDS             17109..17624
                     /locus_tag="MOX77_001030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020246307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356644.1"
                     /translation="MKKLKTKKLKESEFIRYIENNPVVSKALCEEYGICTETIAYALY
                     VHSNNFFLKNDYVQDDIHYDIVKNNLIIMKPTLRQYYRRTRQVDYNGYTFLSGIKEYQ
                     DYCILLTLCCYHWIADVFTVYNHSERSQFIVDVANDLLKRSIDHFSVEHENVINCFNM
                     LKEKLPSYKKK"
     gene            17708..18031
                     /locus_tag="MOX77_001031"
     CDS             17708..18031
                     /locus_tag="MOX77_001031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004151476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraD"
                     /protein_id="HCA3356645.1"
                     /translation="MSDISDKEQTRKKPRIKKTLEQQLASAQMRLNRLQYKSKKEAKQ
                     IETRQKIILGAEVAKALDCDVFTVDKDLVLGMLLEIPHLHPDDKERFKRSGMLFLASM
                     KGRKT"
     gene            18331..19560
                     /locus_tag="MOX77_001032"
                     /pseudo
     CDS             18331..19560
                     /locus_tag="MOX77_001032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015606142.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="shufflon system plasmid conjugative transfer
                     pilus tip adhesin PilV"
     gene            20284..20598
                     /locus_tag="MOX77_001033"
     CDS             20284..20598
                     /locus_tag="MOX77_001033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001019842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356646.1"
                     /translation="MNIFDDNDYEKACKWYKHIRSNVEGFNVKIEKLREKTALDLLNN
                     EGVDYFHKGYQSFVERFEKVFIKSFLAPYLKGPFYSSIGIYSSIYSSSSILIFVCYLI
                     IN"
     gene            20620..22041
                     /gene="pilV"
                     /locus_tag="MOX77_001034"
     CDS             20620..22041
                     /gene="pilV"
                     /locus_tag="MOX77_001034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000744513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shufflon system plasmid conjugative transfer
                     pilus tip adhesin PilV"
                     /protein_id="HCA3356647.1"
                     /translation="MKMKIKKGFSLLELTLVLGVGTMVAFMKFQDMKNEQESIMASAV
                     GQQMKQIGEAVNGYINIRYDKLSTLSNAAGTGTDPGPRTCSGSVCEITYQTLINEGLL
                     LSTYTGTNANKSSYKIILKRDGTSPNYVINGLITTSTAWIEGGKTRYDLLGKAMQTAG
                     IDSGMTKTTSIASGHSGQWSETSANFNNITSAGQLAFRVGFNSALYSVYLRRDGTLPM
                     TGDLNLDGHNINNVAALNATGNITTTGDVQARNIKATGKIDADGNISAGNWMWAKNGY
                     GDAIGFGGDGYSGGLGRDYEIKMLSNHPLTIHSPTSSRGNDVILDIDGNMRVQTDISS
                     LRNITASGNIESSQNVKGATLESTGRATVGEFVQLNGQAEVGKECQSNGLQGRTAEGK
                     ILSCVNGVWETIDANLKISTYSLKPPKHQLNMGVHSVCSLSNVKFYKGNNTPYISCEI
                     IKNGNNWLFQTVYSTQCEAVCIN"
     gene            complement(22409..25369)
                     /locus_tag="MOX77_001035"
     CDS             complement(22409..25369)
                     /locus_tag="MOX77_001035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001751376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HCA3356648.1"
                     /translation="MKLHFESDLTYQQNAITSVCDLFEGQEKWESEMTVLAPAQGALS
                     FEGATGSMPVNPQIPEDDVLLKNLNNVQLKNQLPPSPVLDSHDFTVEMETGTGKTYVY
                     LRTMLELNKRYGMSKFIIVVPSVAIKEGVYKTLQITEEHFKSLFAGVPYEYYLYDSAK
                     PADVRNFATSSVMQIMVMTVGAINKKDVNKLYQSSEKTTVDDLDKPIDLIRATRPIII
                     VDEPQSVDGGLNGAGKTALDAMHPMFTLRYSATHVHKHHMVYRLDAIDAYNQKLVKQI
                     EVAGLEVQNASNSPYVKLVSINNKKNSISATVIVDIADKKGNVNRSEITVYDGMTLDD
                     ETGRDIYQGYRISEIRTGKEGYLTLETPSDTYYMKVGDVVGDIDPMLIQRHMIRRTIR
                     EHLDKELRLNTQQIKVLTLFFIDKVDLYRQTNEEGVREPGEYARIFEEEYLKAIKSPA
                     YKDLLPSHPEHAKDVHDGYFSIDKKGAWAETSESNNTGRENAERGYNLIMKNKEKLLS
                     FSNPVRFIFSHSALKEGWDNPNVFQICSLREMGSERERRQTLGRGLRLCVNQEGERVR
                     DDSINILTVVASENYEAYAERLQSEIESETGIRFGVIEKDAFAHLIFADSSQGLGISG
                     SHDIWSELQTEGYIEKSGKITKTLKKELFENTFVVSEKYASLQEQIETILRKSAGRLN
                     INNADERKTIKYRKEVLNSPEFEALWQRICQKTLYRLAFDEEELIKSCTKSLSEMQPV
                     AKAMVSFSKATIKQSQSGLDVKALSNGTTSSVVDVAEQPLPDILGVLQEKTGLTRRSL
                     STILKESGRLADFAKNPQQFISEAIGRINYCKRLSIVDGIKYYPLKGEVYAQSLFMDK
                     ELTGYARNLFETSSKSVYEYVPKDSEVESRFAQELEEQDEVKLYVKLPGWFKIPTPLG
                     TYNPDWALVIEDNGEEHIYFVVETKSKHIGLGHEEDAKIACGTAHFSALKAEKINAAK
                     YVRATAITEIMSSL"
     gene            complement(25379..27355)
                     /locus_tag="MOX77_001036"
     CDS             complement(25379..27355)
                     /locus_tag="MOX77_001036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001038193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HCA3356649.1"
                     /translation="MNKLSPEMPELQSMNITADNITKLKSLFPEAFNENGIDFDVLKQ
                     LLGENVDEKEERYGLNWHGKRQARQLALTPSRGTLRPCKDESVDWDNTKNLMIEGDNL
                     EVLKLLQKSYTGKVKLIYIDPPYNTGKDFVYPDNFQDNMKNYLEITGQTEEGVRVSTN
                     AETSGRYHTDWLNMMYPRIKLARNLLSDSGFIFISIDEHEVHNLCSLCFEIFGEENFI
                     ALIANTNNPKGRSDDKFIATAHEYILVMTKNITHAKTYGFEPDDKILKRYNKIDEAGE
                     VFRDMDLRKTGDADRRQDRPDMFYYFYYDEVKNKLSVSKDQKNDGLIEIKPIRDDGTD
                     GRWRWGFDTAKTKIESVYAKFMPTKKMWGIMEKDYLSKRDAVKATSSWTHRDVNSERG
                     SEQFIEIGFDKEVFSRPKPLGTLLRIIEIATYPNEECIALDFFGGSGTFGHAVFTANA
                     IKNRKIKFVIAQLPELVDENTKEQAIAAAFLKKHGMSLKISEITKERLRRAGKKVRED
                     NPDWNGDVGFRVFKLDTSNIRPWEATAETLSEQIDAYVSPILEGRNEEDLLTELMLKR
                     GIDLSVNIETRQFDGLTVSCVDGGKLFTCFAKQIPASSVEELTKGIIDWYKSLKAGKD
                     TVCYFLDDAFENNVAKTNLCAILEQHGLTNLHSL"
     gene            27550..28938
                     /locus_tag="MOX77_001037"
     CDS             27550..28938
                     /locus_tag="MOX77_001037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020803150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SpnT protein"
                     /protein_id="HCA3356650.1"
                     /translation="MAKLNKKQLSLLKEMPAEQLMQIICDIAEDNGQAKSFLINEYLL
                     TPEESLKKAEAEYKRVIKTKRFYDYYEAAIFFEGLYRNVIFPLEKTVSTLPEKTEAFC
                     HDLLLSFDKVSEIADTSDGSWMDYYNGAVEIWLKSLSLQKDKSIDVIADKIISVLKGD
                     VYFNFDIFDKYKKELGYNVIRVLRESLLKTGDVNGAVELSLYIRDVDFIRQCFEKRKL
                     NQPEYIIKFAELLVDELCTEEAIQVLNKIKEDKSVDQAGLRDKWTEVLALALIEEGEI
                     QQAKTICIDGFKNRCDVIFYNIYNLVEKNNDSLDLFSGIAKKKGFPFVILFLSGTDSY
                     GKLDSEVMNASENEIAEMMSLLRGSFVRTLSSELYRHGYACSATLLRRVLAEDSISRS
                     QSKYYTYAASDMKKSIDYSKDIAWTEKIPSTEEYLKSLFIEHKRKYALWEIMLEKIAG
                     LAIEKDSVSYSA"
     gene            complement(28985..30259)
                     /locus_tag="MOX77_001038"
     CDS             complement(28985..30259)
                     /locus_tag="MOX77_001038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001751368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase arm-type DNA-binding domain-containing
                     protein"
                     /protein_id="HCA3356651.1"
                     /translation="MSLTDIKAKNAKPLEKEYKLTDGFGMFLRVTPKGSKYWQMAYRF
                     EGKQKLFSIGVYPAVSLSDARQRRDEARRLLAQGIDPNAKKQAEVKELKAKRDNTRSF
                     RTVAKAWFSTKTKWSDDYGDAVWKRLETYVFPVIGDKDVAELDTGDLLVPVKKVEALG
                     YLEVAMRIQQYITAILRHAVQQKLIRHNPAYDMEGAVQKPQTEHRPALELEEIPQLLN
                     KIAEYKGRRLTILAIQLNLMIFIRSSELRFARWSEIDFKSKLWVIPEQREAIENVKHS
                     TRGAKMKRKHLVPLCKQAMKILKEIRQLTYEEGHDDGLIFTGCYDSFKPMSENTINKA
                     LRNMGYDTKQDICGHGFRTLACSALIESGLWSEDAVELQMSHKESNSVRAAYTHKAKH
                     LDQRRLMLQWWADFLDANSNDMVRPFEFDSNK"
     gene            complement(30440..30515)
                     /locus_tag="MOX77_001039"
     tRNA            complement(30440..30515)
                     /locus_tag="MOX77_001039"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(30480..30482),aa:Asn,seq:gtt)
     gene            complement(31063..31138)
                     /locus_tag="MOX77_001040"
     tRNA            complement(31063..31138)
                     /locus_tag="MOX77_001040"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(31103..31105),aa:Asn,seq:gtt)
     gene            complement(31239..32036)
                     /gene="mtfA"
                     /locus_tag="MOX77_001041"
     CDS             complement(31239..32036)
                     /gene="mtfA"
                     /locus_tag="MOX77_001041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DgsA anti-repressor MtfA"
                     /protein_id="HCA3356652.1"
                     /translation="MIKWPWKAQEITQNEDWPWDDALAIPLLVNLTAQEQARLIALAE
                     RFLQQKRLVALQGFELDSLKSARIALIFCLPILELGIEWLDGFHEVLIYPAPFVVDDE
                     WEDDIGLVHSQRVVQSGQSWQQGPIILNWLDTQDSFDASGFNLIIHEVAHKLDMRNGD
                     RASGIPFIPLRDVAGWEHDLHAAMNNIQDEIDLVGESAASIDAYAATDPAECFAVLSE
                     YFFSAPELFAPRFPALWQRFCQFYRQDPSQRLRVSAAEGDYGEESEH"
     gene            32125..32214
                     /locus_tag="MOX77_001042"
     tRNA            32125..32214
                     /locus_tag="MOX77_001042"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:32159..32161,aa:Ser,seq:cga)
     gene            32517..32678
                     /locus_tag="MOX77_001043"
     CDS             32517..32678
                     /locus_tag="MOX77_001043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001532308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356653.1"
                     /translation="MGAGQKINCCQGNALARGDNLRCGTVDAVQKIWPPDWLKYAHMT
                     IQPENLQNA"
     gene            32805..33224
                     /locus_tag="MOX77_001044"
     CDS             32805..33224
                     /locus_tag="MOX77_001044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translesion error-prone DNA polymerase V
                     autoproteolytic subunit"
                     /protein_id="HCA3356654.1"
                     /translation="MEFFRPTELREIIPLPFFSYLVPCGFPSPAADYIEQRIDLNELL
                     VSHPSSTYFVKATGDSMIEAGISDGDLLVVDSSRNADHGDIVIAAIEGEFTVKRLQLR
                     PTVQLIPMNGAYRPIPVGSEDTLDIFGVVTFIIKAVS"
     gene            33227..34495
                     /locus_tag="MOX77_001045"
     CDS             33227..34495
                     /locus_tag="MOX77_001045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Y-family DNA polymerase"
                     /protein_id="HCA3356655.1"
                     /translation="MFALCDVNSFYASCETVFRPDLCGRPVVVLSNNDGCVIACSAEA
                     KQLGIAAGEPYFKQKERFRRSGVVCFSSNYELYADMSNQVMTTLEEMVPRVEIYSIDE
                     AFCDLTGVRNCRDLTDFGHEIRATVLKRTHLTVGVGIAQTKTLAKLANHAAKKWQRQT
                     DGVVDLSNIDRQRRLLALIPVEDVWGVGRRISKKLNALGIKTALDLSEQSTWIIRKHF
                     NVVLERTVRELRGEPCLELEEFAPAKQEIVCSRSFGERVTDYEEMRQAVYSYAARAAE
                     KLRGEHQYCCFISTFVKTSPFALNEPYYGNSAAVTLLTPTQDSRDIINAAVKCLDKIW
                     RDGHRYQKAGVMLGGFFSQGVAQLNLFDDNAPRAGSAKLMEVLDHLNAKDGKGTLYFA
                     GQGMSQQWAMKREMLSPRYTTRYSDLLRVK"
     gene            34941..35153
                     /locus_tag="MOX77_001046"
     CDS             34941..35153
                     /locus_tag="MOX77_001046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HCA3356656.1"
                     /translation="MTTKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNEFRT
                     LNENQEVEFSAEQGPKGPSAVNVVAL"
     gene            35164..35352
                     /locus_tag="MOX77_001047"
     CDS             35164..35352
                     /locus_tag="MOX77_001047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HCA3356657.1"
                     /translation="MTNKIHFRCPCCHGSQYRTSTFDVTEQNPFGAKCIFCKSTMITF
                     DNVGLYIRSGQVPLDFRK"
     gene            complement(35613..36797)
                     /gene="ompS1"
                     /locus_tag="MOX77_001048"
     CDS             complement(35613..36797)
                     /gene="ompS1"
                     /locus_tag="MOX77_001048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin OmpS1"
                     /protein_id="HCA3356658.1"
                     /translation="MNRKVLALLVPALLVAGAANAAEIYNKNGNKLDLYGKVDGLRYF
                     SDNAGDDGDQSYARIGFKGETQINDMLTGYGQWEYNIKVNTTEGEGANSWTRLGFAGL
                     KFGEYGSFDYGRNYGVIYDIEAWTDALPEFGGDTYTQTDVYMLGRTNGVATYRNTDFF
                     GLVEGLNFALQYQGNNENGGAGAGEGTGNGGNRKLARENGDGFGMSTSYDFDFGLSLG
                     AAYSSSDRSDNQVARGYGDGMNERNNYAGGETAEAWTIGAKYDAYNVYLAAMYAETRN
                     MTYYGGGNGEGNGSIANKTQNFEVVAQYQFDFGLRPSIAYLQSKGKDLGGQEVHRGNW
                     RYTDKDLVKYVDVGMTYYFNKNMSTYVDYKINLLDEDDDFYANNGIATDDIVGVGLVY
                     QF"
     gene            37448..37759
                     /locus_tag="MOX77_001049"
     CDS             37448..37759
                     /locus_tag="MOX77_001049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000107428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356659.1"
                     /translation="MSTREDNATRSMGGKLALWVFYTFCGYFIWAMARCVWLMSAIQT
                     EPVLGPISTPGSATEKWLNALSLGVVWLILGSIAWYTRPRKNRGYPADTQPETRKHAR
                     M"
     gene            37839..38534
                     /locus_tag="MOX77_001050"
     CDS             37839..38534
                     /locus_tag="MOX77_001050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphohydrolase"
                     /protein_id="HCA3356660.1"
                     /translation="MDSGYWQSQFEDWLRHHHQEQDAAHDIFHFRRVWATAQTLGENS
                     PVDWLVVLSACYFHDIVSLAKNHPQRHRSSILAAAETRRIFLRDFPDFPAEKLAGICH
                     AIEAHSFSAKIAPTTPEAKIVQDADRLEALGAIGLARVFAVSGALGVALFDADDPFAN
                     RRPLNDKQFALDHFKTKLLKLPLTMQTERGKHLAQRNADFLVSYMAKLSAELKGDYET
                     RDDAVIQMFATYQ"
     gene            38608..40038
                     /locus_tag="MOX77_001051"
     CDS             38608..40038
                     /locus_tag="MOX77_001051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HCA3356661.1"
                     /translation="MQENISVTHARNLIADDAGSEIQAMLSQLLEIYDVKTLVAHLNG
                     LGEQHWSPAIFKRVMMNAAWHRLSDNELSCLKTELPTPPAHHPHYAFRFIDLFAGIGG
                     IRRGFEAIGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIRDITLSHREGVSDDE
                     AAEHIRQHIPQHDVLLAGFPCQPFSLAGVSKKNALGRAHGFACETQGTLFFDVVRIID
                     ARRPALFVLENVKNLKSHDQGNTFRIIMQTLDELGYDVADAADNGPDDPKIIDGQHFL
                     PQHRERIVLVGFRRDLNLKTDFTLRNIARCYPPRRPTLAELLEPVVEAKYILTPVLWK
                     YLYRYAKKHQARGNGFGYGMVYPDNPESVARTLSARYYKDGAEILIDRGWDMAKGEVN
                     FDDAGNQQHRPRRLTPRECARLMGFEAPQTYQFRIPVSDTQAYRQFGNSVVVPVFAAV
                     AKLLEPKIHQAVTLRQRETADGGRSR"
     gene            40019..>40407
                     /locus_tag="MOX77_001052"
     CDS             40019..>40407
                     /locus_tag="MOX77_001052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="very short patch repair endonuclease"
                     /protein_id="HCA3356662.1"
                     /translation="MADVHDKATRSKNMRAIATRDTAIEKRLAGLLSAQGITFHTQDT
                     TLPGKPDFVVNDYDCVIFTHGCFWHHHHCYLFKVPATRTAFWLEKIGKNVERDERDIQ
                     RLQALGWRVLIVWECALRGRAKLSDAA"
BASE COUNT        11651 a         8005 c         9098 g        11653 t
ORIGIN      
        1 ctgttttatt gatgtaccgt catcgctacg cccgtgaaga ggggcttggc aatgtattta
       61 tcggtaaagt cagcggacgg caaacctgca ttactctggg attggcggta atcgtcgcca
      121 cggtattact gcttggtatg caaggcctgg ccacaatggt ggtcacactc gcggcgattt
      181 tcatccttgg ccagttgctt aaacgtacgc ttggcggtca aaccggcgat acgctgggcg
      241 cggcgatcga acttggcgaa ctgatctttc tgctggctct gttatgagcc gattattacg
      301 gacgagacat cttatgcaga cactacacgc tttattccgt gacattcctg cgccggacgc
      361 cgaggcgatg gcgcgtgcgc agcaacatat tgacggcctg ctcaaaccgc cgggtagctt
      421 gggcagactg gaaaccttag ccgttcagct cgcgggaatg ccgggtctta acggtacgcc
      481 gcaggtaggt gaaaaggcgg tgctggtgat gtgcgccgac catggcgtct gggatgaagg
      541 cgtagcggtt tcgcccaaaa tcgtgacggc gattcaggcg gcgaatatga cgcagggaac
      601 aaccggcgta tgtgtgcttg ccgctcaggc tggtgcaaag gtgcatgtca ttgatgtcgg
      661 tattgatgcc gaacctattc cgggcgtagt tgatatgcgc gtcgcgcgcg gctgcggaaa
      721 tattgccgtt ggcccggcga tgagtcgctc tcaggctgag gcgcttttgc tggaggtttc
      781 ccgctatacc tgcgacctgg cgaaacgcgg cgtgacctta tttggcgttg gggagctggg
      841 aatggcgaac actacgccag ccgccgcgat ggtcagcgtt tttacaggaa gtgatgcaaa
      901 agaggtggtg gggattggcg cgaatcttcc gccttcccgc atcgataata aagtagacgt
      961 cgtgcggcgg gcgattgcga ttaatcagcc caatccgcgc gacggcattg atgtgttgtc
     1021 gaaggtgggg gggtttgatc tggtcgggat gaccggcgtg atgcttggcg cggcaaggtg
     1081 tggcttaccc gtattgctgg atggctttct ttcctactcg gcagcgctgg cggcctgtca
     1141 gattgcgcct gcggtgagac cttatctgat cccgtcgcac ttttcggcgg aaaagggcgc
     1201 ccgcatcgcg ctcgcgcatt tgtctatgga accctatttg catatggcga tgcggttagg
     1261 tgaaggaagc ggcgcggcgc tggcgatgcc gatcgtggaa gccgcgtgcg ccatgttcca
     1321 caatatgggg gaattggcgg ccagtaatat tgtcctgccg gaggggaacg caaacgcaac
     1381 ataacccggg cgcacaacac cagccatgtg agaaaaaagc tatacttaac gcacacctgc
     1441 cgcgacaaag gaagggatat aatgcgtcgt atcacacctt tttttccgtt tttcgtcttg
     1501 ttggtaagcc atttctcgct ggctataagc tatccgttgc cgcccgaagg cagtcgtctg
     1561 gtaggacagc ctgtcacaat cgccgtacct cagaacaata ctcagccctt agagtcattt
     1621 gccgcccgct atggtcaggg gttgagtaat atgcttgaag cgaatcccgg cgtggatgtg
     1681 tttttacctc agtctggttc cacactggta gtgccgcagc agttgattct gcctgacacc
     1741 gttcgtgaag gtattgtggt aaacgtcgcc gagatgcgcc tttattatta tcccgcaggc
     1801 acgaatacgg ttgaggtact acccattggt attggtcagg ctggccgtga aacgccgcgc
     1861 aactgggtaa ctgcggttga acgcaaacaa gatggcccgg tttgggtgcc aacggctaat
     1921 acgcgtcggg aatatgctaa agagggaaaa acgctgcccg cgatggtgcc tgcggggccg
     1981 gataacccta tggggctata cgcaatatat atcggcaggt tatatgccac ccatggcact
     2041 aacgctaact ttggcattgg ccttcgcgtc agtcagggct gtatccgttt acgcaatgac
     2101 gatattaaat atttattcga ccatgttcct gtaggaaccc gcgttcagat tatcgacagg
     2161 cccgttaaat tttcggtaga gccggatggc agtcgttggc tggaggtaca cgaaccgctt
     2221 tctcgcaacc gtgctgaatt tgagtcagac aaaaaagttc cattgcccgt tacgccagtg
     2281 ctgcgcacgt ttatcaaagg ggatgacgtt gatacttcgc gggttaatga ggtgctggag
     2341 cgccgttccg gaatgccggt caacattagc gcaggcaggt ctggccttta aatatcctgc
     2401 cacattgctg gttttcatgg gctggaacat ctgtattagt agtgagtgtc atggcagggg
     2461 cttcattttc tcaacgaacc gcgaggccgc cgattaagcc cccaaaaact atggatgcca
     2521 aaaagcccgg aaaaccttat caggtcaacc gggtaaagat aagttcttat tttttaaacg
     2581 tctccggact cgcagggata tcccgaaact aaaatctggc tcctctgact ggactcgaac
     2641 cagtgacata cggattaaca gtccgccgtt ctaccgactg aactacagag gaatcgtgtg
     2701 gggtcgtata ttagcggcgg aaaaattttt gtcaaacccc atttaacccc ttacagattc
     2761 gattgcgggt tatctcatca ctttgttgca tttgcagaca ttttttctgc aaaaagcttt
     2821 gcagccttac gatttctcgc tcattattga aatgtggttt caactctctt ctttaaggtc
     2881 cattttgaac gtctccactg ccttacgcca ggttgtcgtc cgtacgccct ggtatgccaa
     2941 acgcaagagc tacaaagtgt tgttctggcg tgaaatcacc ccacttgcta tccccatttt
     3001 tctggaaaat acctgtgttt tgctaatggg cgtgctcagt acttttctcg tcagttggtt
     3061 gggcaaggaa gcaatggcgg gcgtggggct tgccgacagt tttaatatgg taattatggc
     3121 tttttttgcg gctatcgatc ttggtactac ggtggtggtc gcctttagcc tcggcaagcg
     3181 cgataggcga cgggcaaggg cggcggcgcg ccagtcgctg gtgattatga cgctatttgc
     3241 cgttgtgctg gcagtggtca ttcattattt cggcagtgaa attattaata ttgtcgcagg
     3301 cgaggcgacg ccagaagtaa aggggctggc gttaacgtac cttgaactga cggtactgag
     3361 ttatccggct gcggcaattg cgctaatcgg tagcggcgcg ctgcgtgggg cagggaatac
     3421 gaaaatcccg ttgatgatta acggcgggat gaacattctc aatattgtca tcagcagcat
     3481 cctgatttac ggggctttct cctggcaagg gctgggtttt gccggtgcgg ggctgggatt
     3541 aaccatttcg cgctacatcg gcgcggtagc gattatttgg gtgctgatga ttggttttaa
     3601 tccggcgctg cgcattccgc tgaaaagcta tctgaagccg ttgaatttcg gcattatctg
     3661 ggaagtgatg ggtatcggta ttccggcgag cattgaatca gtgctgttca acggtggcaa
     3721 gctactgacg caaatgtttg tcgccggaat gggcactaac gttattgcgg gtaactttat
     3781 tgccttttcc gtggcggcgc ttatcaatct gccgggtaac gcccttggtt cggcgtcgac
     3841 tattatcacc ggtaagcgtc ttggtaccgg gcaaattggt caggcagagc gtcaattgcg
     3901 ccatgtattc tggatgtcga ctatcgtact tacggcaatc gcctggggaa cagcgccgtt
     3961 cgcgggtctg tttgcctcat tttataccca ggagcaggac gtaaaagagg tagtgaaagt
     4021 tctgctctgg cttaatgctg cctttatgcc aatttgggct gccgcgtggg tgctgccgtc
     4081 gggttttaaa ggcgcgcgcg atgtgcgatt tgcgatgtgg gtatcgatgc tggggatgtg
     4141 gggctgtcgc gttgtggcag ggtatacgct tggtattgtg ctgggtatgg gggttgtagg
     4201 ggtttggctg gggatgtttc ttgactgggc cgtgcgtggc gcactgtttt actggcgtct
     4261 gataagcggg cgctggctgt ggagataccc gcgcgtaaag agggagtaag agctttttgc
     4321 tgtgaaaatc atcaggaaac ggtgaatttt aaccgaagtg tggaataaag cagcaaacga
     4381 actttttttg tgaaaacagg ctttgacaag ccaggggcac ctcgttaata ttcgccccgt
     4441 tcacacgatt cctctgtagt tcagtcggta gaacggcgga ctgttaatcc gtatgtcact
     4501 ggttcgagtc cagtcagagg agccagattt tagtttcggg acatcctggc gagtccggag
     4561 acgtttaaaa aataagaact tatctttacc cggttggcct gagaaggtct gccgggtttt
     4621 ttgacatcca tagtttttgg gggcttaatc gggggcctcg cggttcgctg agaaaatgga
     4681 gcccccacct atggcattaa ccgataccgc tatccgcaag attaaacccg tatcagtatg
     4741 ctgacatata gaggtgttcg attcaaacgg agcgatcaca caagcttgcc aggtgatgcc
     4801 cctggtggga atcgcgactg tctctttcat ctgatttcag atatttcccg tgatcttgat
     4861 ccgttctttc ccaaaagatt gatttctttc attcgaaaca aggatgtaca ataagtaaac
     4921 caaaatagta actatagagt ttctaatgga tacagtagaa gaactaaatg gaacatactt
     4981 ctatgcagga aaatccaatc tgactgctgc cgaacttctg ttatgatttt ctgtgagaat
     5041 accgcaagcc agtttgggat tggtgttgca gatttcgggg ctgttgttgc tctggtatca
     5101 ggtcgtaata atctttggac aagggcgaaa cccgctggag cgactaaagg cacatcatac
     5161 gcgtccagga ctgcacgtgc agtgtttaaa aagtcaaaat ttccctttgg aatatccctt
     5221 ccgacatggt taggcggtta caccccgtgg acagccagac gtgttatggt tcgtaacatt
     5281 gcgccgtttg ttggacgttc cattcctttg atcggggaaa ttatccttgc cgcagatgtg
     5341 tcacaaatag catatcgcac tatacgcgac tacaatacca ttgctcgggg caatgataag
     5401 ttatgctaga caatattgaa cagcaagttt acgagcttgt acggccttat gctggcacat
     5461 atctgttcaa cattaagcaa gtggaattaa caccagagat tgaccttgat actgatctga
     5521 gcattgatga acttgaagcc gaagatctca tgaataaatt cttcgagaaa ctcaatgtcg
     5581 agcgaggtaa cttcagaata gaaacctatt ttcctaatca ccctttttca tggcatccgt
     5641 tcaagaaaac ggagcctgta cccgtcccag atttcactat cagcatgctg atcgagtcag
     5701 caaaagccgg gaaatggtta tatgactaat tgtaatgaac ttaacaaatg gctgtaccag
     5761 tacccttctt tttgagcgat gatggtggcg ctaagatagt tctcttttct ttttaaaggg
     5821 ttcatgttta ctgccgccgc ccttacgcta acccctttag tttcctcctt tgctgtcata
     5881 ctatcgaatg acgtgcctca cctgtgaacg ctaaggagaa taatatggaa aataaaggca
     5941 caaacctgac acccgagcag gcgctggatc gcctggagga gctgtacgag cagtcggtta
     6001 acgcgctccg tgaagccatc gctgactatg ttgataacgg cacgctgccc gatccccatg
     6061 ccaggcttaa cggactgttt gtttatcctt cgctgtctgt aagctgggat ggcgcgacac
     6121 cgaacccgcc taaaacacgc gcttttggac gctttactca tcccggctgt tataccacta
     6181 ccgttacgcg gcctgcgcta tttcgcgctt atcttctgga acagcttaac ctcgtttacc
     6241 atgattatgg cgcgcatatt gcgatagagg cctcgcacca tgagatcccg tatccttatg
     6301 tgatcgatgg ctcggctctg acgctggatc gttctatgag cgccgggcta acgcgccatt
     6361 ttcctaccac agaactggcg cagattggcg atgagacggc agacggtctg ttccaccccg
     6421 gcgaattcta tccgttatcg cacttcgacg cgcgtcgtgt tgacttctcg ttggcccggt
     6481 tacggcacta taccggtacg ccggttgaac attttcagcc cttcgttttg tttaccaact
     6541 acacccgcta tgtcgatgag tttgtgcgct ggggatgcag ccaaattctt gatcctgaca
     6601 gtccctatat cgcgctttcc tgtgccggcg gaatttggat cacggcagaa acggaagcgc
     6661 cggaagaggc tatttccgat ctggcctgga agaagcatca gatgcctgcc tggcacctgg
     6721 taacggcaga tgggcagggg attacgctgg taaatatcgg tgtcggccct tcaaatgcta
     6781 aaacgatttg cgaccatttg gccgtgctgc ggcctgacgt ctggcttatg attgggcact
     6841 gtggagggtt acgagaaagt caggcgattg gtgattatgt gctggcccat gcctacttac
     6901 gcgatgatca tgtgctggat gctgttctgc cgcctgatat tccgattcca agcattgcgg
     6961 aagtacagcg tgcgctgtac gacgctacca aagcggttag cggaatgccc ggcgaagagg
     7021 tgaaacagcg actgcgcacg ggaacggtcg tcaccacgga tgaccgtaac tgggagcttc
     7081 gttattccgc atctgcgctg cgattcaacc ttagccgtgc ggtcgcgatt gatatggaga
     7141 gcgcgacgat tgcagcccag ggctatcgct tccgcgtgcc ttacggcacg ctgctttgtg
     7201 tttctgacaa acctttacac ggtgaaatta aactgcccgg gcaggcaaac cggttttatg
     7261 agggggctat ttcagaacat ttgcaaattg gtattcgtgc tattgattta ctacgcgcag
     7321 aaggtgatcg tttgcactca cgtaaattac gcacgtttaa tgagccgccg tttcgctaac
     7381 gaaatgggct gtcgcctgct gttgggcagg agcggaagag gcatatttat gtgatatgga
     7441 aagtggttga atgaagcctt agcgggaggt gattctgcat cccgctaagg ccttattgtg
     7501 ccgcggcttc atcaccatcg ccggagatct gtcgccgata atcgcgtcta cgtcaggaaa
     7561 cgcgccggaa ggcgaaaaca ttgcgccgca cttcacgctc cttgagcgcc tggacccaca
     7621 agcccggatt aacaagcaga taccgaccgt gagaatcgat cagcttaaag ggattatcag
     7681 aaggcttgat actgaggatt ttcgcgttgg acagggatat agggtggtca cgccattatc
     7741 gaactgaaat ggccccaaat cagaccacca atttcaccgg atgcgcaggt aaaaccagat
     7801 acgcatcggt aaaggttttc acgctaactt attgaaacct aattaaatag ggacttataa
     7861 gtacgcctga aaacagaaat ttggctcctc tgactggact cgaacttcat ctacatctcc
     7921 tgttattact gcttttgtta aacttagcca tatttttacc aacatattta ccatcattat
     7981 tgttttcttg tggttaaaat gtcaattaaa aacaattggt tgttgccata atcatctgac
     8041 tatacgtatc taaatttgct ttcattatca acatgatgtt gtcgttattt tttttaaaat
     8101 aaatgatgaa aaacaattgg ttatttttta ttaaataaat catgtttagt caaggtgaaa
     8161 gcactgacct ccaaggtcac ttactgtgct cacaccattt tgaaaacccg ctcctctttt
     8221 ccactttctc tatcatgttg aatgggctaa cgtttaggaa acacaaaagc aatcggtaga
     8281 acaatgacta cacaaaagga aatggaagaa atcagggcag cgttatcttg gtttgatgta
     8341 cgccgatatg atggccttaa agacctcacc ttagaacaaa tctatgcaga gcttgaaaga
     8401 cggatgttgg cttacaaaac aagacaacaa tgggaaacag caggcaaaga taatcaaatg
     8461 caagcgatat accatgatgc cacaatccga tgtggtgatg tgatacttaa atcagactgg
     8521 atttcagaca atcacagact gtcgcatagc tatgctgtaa gaccaatgac cagagttcaa
     8581 ttgttcaact atgggcgggc tatgtatcgg ctggagactt cagagcaaac agaccctgtt
     8641 gcagtgagtt ccgactacat ctctgagtat ctgaaacaag gaggcatgaa ccctgctaac
     8701 aagatgctga ttgaaattga cttggaagaa gccagcagtg acgatctcgc agaacatctg
     8761 aaagtactga ttgctctatg gcaaaagcac ctgaaaacgc ctaaaccccc gaaacgaaaa
     8821 tttaggtttg gtcataagac ctttgaaaga atacttgatt acaaagtcat ccctttgatg
     8881 gatttgatct catgggaaca gctctacaac gaaggtaaga acataccttt caccatttta
     8941 gctgacatcc tgcatggtaa taatggggtc agaagtagtg agaacatcaa agatactgat
     9001 tatgattacg cgaaaagtta tcttgataac gatgagtact tcaaggtttt aaatgatttc
     9061 tatattaaaa acaatatgtt gaaggattgg ggtatcgttg atgtgataac acttaacgat
     9121 aaatcctcgg ataaaaacaa aaagtaaaca caagggatgt tcacaacctg cgaacatccc
     9181 taaaaagcgt atccctccaa aaatttccgc gaaactcacg gttggtgaac atccctagtt
     9241 tagaaccagc caaaatccta gaattatctc catcgaacaa catactaaaa aacgaaatat
     9301 ccaagatatt acgtaaaaaa aacaggagat aatatggttc aaaacaaaac agataaacat
     9361 ccgaaactga ttcgtttgcc agaagtaaaa agaagaacag ggtttggtaa aacgtggata
     9421 tataccttaa taagagcggg taaatttcct aagcaagtaa aaaccggatt gcgctctata
     9481 gcatttattg aaagtgagat tgatgaatgg atttacaaaa tcatttctga ttctcgcaat
     9541 catatctaaa aaagtttatt aaataatgag aggttaagat gaaaagtaaa aacgtactgc
     9601 cttgtgtggt gactgttacg aatgatgaga cagaagtatt tatggaaatg gcaataaata
     9661 actttagaaa acatcttcag gtcatgattg attgtatggg aaatgattac gagcgtcatt
     9721 ttaaagaccg gctttatatt gaagaagtga ttggaaaagt gatcgagcga acaaaacgag
     9781 agtttgctga atcaatgaaa gataataaag ggaaagaata tcatctgttc ttggatgagg
     9841 tgagaaggaa tctgagagtt atttattctg cgtatcgtac taactattaa tgagagaggt
     9901 gaatatgaac gaaaaatgtt taggctggaa tgaaataccc gttaaaatat ccgcaagtaa
     9961 tgctgagaca gcaaactttg ctactgatgt tgtaaatacc tataacgagt taatacatta
    10021 cttatacttt aatctaagtg atgatgaatt tctgaaaaaa atgaaggatg gattttacag
    10081 ggagatattc ataatggata ttattaatct cacgctacag gaatggtttg aaagtgctga
    10141 agagataaag attaaataca tatcagttcc agaggttaaa accatactaa gtagttatca
    10201 tgagtttttg attaaatgct ttaatggtga tgattatctt ctttattaca aaagaataga
    10261 aatcagcgca aataaacaga ctgtaatata aaataagagg taatgaaatg agtgaaaaac
    10321 tgataaaaga atctcaaaaa gtatttatgc atatggcagg tttgttttat gaaatcaaaa
    10381 tgaatacgct taaggaagtc cgacccgatg aagcagagat gttaatggag gatgatgcat
    10441 tcatggatag tatttataag gattgtatca aaaatgcaag cgcatctttt aaaaaggtag
    10501 tcagatggga gtactttgaa caagggcatt cagtaaaaat ggttgataag gaggtggtgt
    10561 tgataacatt acgtgttaat cacaaacgaa gataaaaagg ttatttaata aatcattttt
    10621 agcctcattc atggggcgaa aaaaaagaaa acaaatatca tttaatagtg aggcgtaacc
    10681 atgagtaaaa tttttgaaat taaaagtgta tctacagaaa cgttttataa tattgcagag
    10741 cgttcgtttg aggctagttg gaaggttatg caggatatgg cctctgataa tgtctcatac
    10801 ttggtatatg atgcggattt tatgtgtgtt ttcatcggca atgttattga gcatatcagt
    10861 aaaaattttt acatcattat ccaatgtgaa tgtctggaag gaaagcttga agaagtaaac
    10921 tttgaagagg tagcggaacg tctggtccgg cattcatggg agttttgtaa ataatatcaa
    10981 aataaaaata gattaagaaa tcatgggcag agttgttatc tactcactga tttagattat
    11041 gtggccccgt aatggggctg tacatcgatt acaagaggaa tatgatatga atgatgtggt
    11101 attatacgaa aaaaatgaat caatgttttt tgccatttgc acggtcttat cattatattg
    11161 cgatttcata tacgaaatag catatggatt tcataatgaa gcggtaatga tcattgaaaa
    11221 tgaaaagtgt gtgggacagg cacttaaaat acaaataaac aatctattcg atgatttcga
    11281 ttactacaaa aaagtgaatg gaacagaaaa agtaaaacgg gaagatatag atgaaaaaga
    11341 actctttaac aaagtaatgg cagcacataa ccaaggagta aaagcgctaa tcatgaagaa
    11401 tcttgaggcc aatcttcgag agaaagagga aggttctgaa tattggaagt taaaaatatt
    11461 taataggttt aatgggatat agaagtcaat gtaggcttct atatattcag ataaagaaag
    11521 tagtcatgat ctttatctca tcggagaaag tgtttttcat ggctggatat ttaaaaaatt
    11581 attttatttt gtttttcatt attttttcga cttctttttt ttgtgatgta gataaattcc
    11641 ttttaatctc tttcattttg tttttaaaat taagattatc tctttcatca tgcaaggact
    11701 tcattttatt atatgcttcg tcactgaaag gatgtaagtt atcatctatt ttttcatcta
    11761 agtaagaaga aaggaagcat ctatcaaaat aattttttct aagcgcatcg taaattttag
    11821 cactatcaat aattgtttca tcttccggtt ctttttttat atggtctgtc atgttgactc
    11881 ctcttatttt tagtggattg tgtatatatt ttattttaag ggattggttc aaagtgtcaa
    11941 atttaaatgt tctttcaaaa taacgttcaa tggtattttg aagctttcaa tgctggatta
    12001 tataagaatg atttacatgt ttatttgaaa aatagctatc aacttaagta ccgggattcg
    12061 ggactttaac tcccggaagt cggtacttgt tttttagcta taactggcct gagagcattt
    12121 ttttcttcat tattcagtta gtgaagatga gaacaactaa tcatagatgc tttaggaggc
    12181 agttttactt tttattgcat tggtttcctc tcttgaattt atatctcagc ttagtgattg
    12241 ttaggaataa tcactaagcg ctgctgctga aaatatagtt ttattatacg tttaagatca
    12301 aatatcatag gttgtaaata acatgctaca tttcaagatg tgatcattat caattatcat
    12361 aaggaaataa tctataacga aactagaaaa tttaaattta ccatataagt tatacgctaa
    12421 aacgaaataa ttgattcagt attagggcat agccgtgtgt aagtagtaga tggaattttc
    12481 aggaagaatg ttttaaaaat acatgctcat attattttag cagtataaat gaatgtgatt
    12541 attgtaacca tgatgaaata aaaaataata accctattat aaaaagaggt tgactgtcta
    12601 caaatcgaat aatatcataa taactattta tgttattatg atattagtta aaaatggaaa
    12661 gaatatgaat aaaagactta atatgctata tgtcaacaac attaacgcat taaataatta
    12721 ccgtgaaaaa cattcagata ataacttaca tggccccctc cttttaaagc taaaaaatta
    12781 ttttcatcag cataataaat tgatggttat aggacaggaa acctatggat ggtgcaactc
    12841 tcccgatatt aatgaacagc ttgaaacata tgaggagttc gattttggcg tatcatatta
    12901 tagcagtcca ttctggaata tcataaggaa agtagagcga gcgcttggta ttgaaccata
    12961 tgcaattgca tggtcaaatc tgaatcggtt tgatgttgat tgcggatcac cagattatac
    13021 cgagctagct agagatatat catcgtttga ttatatatta aaggaggaaa ttaatattct
    13081 tactcctgat atatgtgttt tcttcacaaa tcataaatat gattatcgac taacgtcttt
    13141 atatgaagat ttaatgtttg aaaacataaa tggattgcca gaaaaacatt tcgtaagatt
    13201 ataccatcca gacctcccag aatatacgat tagagcgcct caccctaaaa caatcagaat
    13261 aaaaggatgg gaaaatgatt tcataaaata tatagaggct attaaatgat tatgcagatg
    13321 cgatcttatt aatatgaata aacaaaattg tgttactaat tgcataacag caatataagt
    13381 tattctatag tttatctagg ccacggcgtg taggtggcct taaacgagga gtatgatttt
    13441 tatcatttat tgttgaaaca gtcggtataa aatccatgtt attatctgca ttgactcgtt
    13501 cgtgcttagg acggcttggg aaacgtcgaa tctcatcagg tgttggtttg taagtatcac
    13561 tgttaaactt agcttgtttc tcatattcag cacgagaaac atgatgacct aatacttcat
    13621 caaagacata gttttcagca atacgtttat catgttctgt actgacagga tcatgcttaa
    13681 ctctgcttga tctaggccat acaaattttt ctttgaagaa atctatgaca agagttgtga
    13741 aacgtttgaa aatattatcc tgacgtggag tagtcttatc ctttctttca tggtcagggg
    13801 cgcttctgga tgccctgttt gggttttgag aggtggatgt tttcagaata gtatttgtac
    13861 cagaatcaga aatactgatt gatggcggaa tacaagcaac aaccttactg acttttgttt
    13921 tatcacggta agatttgact ccacgcaaac gagtatcagg agctggtgct accagtaaag
    13981 gtctttgttc ttcatttgta gaagagctgg atcgcgtttc tggtaaaaca atttcttctg
    14041 gttcagcaag atgtgtaatc gtaaagcttc tgacatcaac gacgatttca agatcaagtt
    14101 cgctgaatgt tttgtagact tcaacggctt cttgcttggc agcatcacga acagcctgtt
    14161 ctgcggctct ttgctcttga gcagctttac tgcgccattt ggcactatgg atacgtttca
    14221 ttgcagggcg gtttgtttca gcggctttag caagccatag cgcttgttct tcattgtcca
    14281 gagcagccgc cgctttttct aatgcctctt catgctgggc ctgaagggaa cgatggtcaa
    14341 tacgttctga tgaacctgcg gcttcgagat agctgttagc catagatgcc catgactcac
    14401 gccacaacac agacattttt ctgtcgttcc agcttctttc ttttttacca aaaccttccg
    14461 ggcctatggc ttttaacgtc aacataacgt gagcatgtgg gttgtcgcta tcaagatcat
    14521 gaaaagcgat gtcggcaatc atgcctttat caacgaaatt tttctgacaa tactcaagga
    14581 caagtttttt cttgtcgtca ttgtttaact cggtgggaat agcaacatcg aaataacggg
    14641 atgtttgacc attgttctgg cgctcaactt tttccacttc attccacaat gctgtagagt
    14701 cttttacgat gtgttctggt gcgttagctg gagctaatat gaaatgcccg tacaaatcag
    14761 tacggcgact ataatcatag gtatcacctg ttctttcatc tgttatcctt gtacgagcat
    14821 gataggcagc cttcgcaacg gaagacctgc cttctgaacg tttcacaatt ttaaaatcaa
    14881 gatgaaaaat agccatacaa taaaaacaac ctcaatataa gtttaaatat caaactaaaa
    14941 tataactctc caatgcgact atgctggttt tagtttttcg caagaaaaac tctggtgttg
    15001 acgttgacct tgtttccgaa ggaaacggtg ttagcctgcg gcaggcaacc gtcggtagac
    15061 cccacacact gcgtagcagt gtataggtgg gcattgcttt atttttatat ctcctaaagg
    15121 agctaaaaat aacgacaatg tataaagctt ttctatagtt aaataataac gctagtttta
    15181 atgtctgtga aattaacggg gctagattcg gatgaacggc tgaggtatta cacgaatctt
    15241 aatgattatg gttttagaga gcgcccgtaa gggcaaaaga gttaatttcc ctcccgccgt
    15301 aaggcgggaa aagccaaatg cactaaaaca gacttataac gacagttttt ttaaaaaaat
    15361 ggatggtgta ggttcggact taaaataaga gtgaaaaagc aaagggtgaa aaataaacca
    15421 taaggaaaga gagtcaagta acgtggggaa tattagatga tttaggttaa tgattttgat
    15481 tgtatatgtt gcatgattac atatagagct tgttgcattt ttgtgcagag tcttgtaaac
    15541 accatttttg ttatcacctt ttgtatcata accattttag ttattgctga ttaaacagta
    15601 aaaataaaat aaaaatccat gagatcatat gttaaatgtg ttttttgacg aaatatattt
    15661 aagtttgtct ggtctttttt atttttaata aagttaggtt gttttatttg acaagtaaaa
    15721 tgttgtgttg taaataaaat aaagatacaa aaaaagccaa ctttcaaagt tgacttttta
    15781 aggactaaaa aagttttgcc gacttttgaa gccttgtaat cagttagagg aataacgtga
    15841 ttacaaatat aataaagtat taaataatct tttcatattt gtcaaatcta aatctcaact
    15901 ttttacaagc ctttcaaata ccatttccaa aaacatttta gtcttcaaaa gcaataacgt
    15961 taaacctgtg tatcaggtct aagaatcttt ggacatcatg tgttaaaaac tgttttgttc
    16021 ttaggttatt gtaggtggca tataaacggg gggaagtcgg tagccaccaa cttgaagcgt
    16081 tcatctaaaa tctataaagc ggtagtataa ttttctttag taaaacgaga aaatgcttta
    16141 aatgatcatg atgtatccgt aggagtccga tggggtgtcc cagtaatgga aacgtgctgg
    16201 aactcaatag ctacggtgag aatcgccaac ctgcgaacct aaaaaaaata ttacaatagt
    16261 atttttttac ggggggttag gggggtgaag cttgcagaaa aactaagttt tcctgacgga
    16321 aaactactac gactgaaagt cgctatctaa aaccccagaa cctaatctaa taaaattcta
    16381 gtactactag tacaaaaaaa taattttaaa aatatcagta ggtaggtgcc atttcatcaa
    16441 ggcactaacg aaagataagt aggcttataa attaaatatg gtgcatggat taatttgagt
    16501 tttttgtttt ttaattgtat taattaaaaa atataaataa aaaggtaatg atatggaaag
    16561 taaaacaaaa aaactaagaa tgggatggat acaaaatctt actgagaatg aaaaaaagat
    16621 aatagatgat tttctggaag aagccgctaa gttaaaaggt aaagcactaa ataaaaaaga
    16681 aaaacaaact gtcaaattta ttgctcgtga tcaagtccgc tcgattagaa aagagcaaaa
    16741 atcaaaaaaa caaaagaaga gtagagttga tatggaagaa aaagaagatg aaacaattaa
    16801 taccatttca aataatgcgg atgagcaagg aagattaaag atactatcag ctaaagaaag
    16861 agattttatc aataatgcca tatatgaaga aatgaaaatt aaaggtagaa agcttgtaaa
    16921 atgtgaaatg aaagaagttt taaaaattgc tcgaaaaaag atcctcaaca atcgtatatc
    16981 ttgtcagatc aaaaatgaaa gaaataaaga aaggtttgag gcagagtttg aatggagaaa
    17041 accagtgcca tttcgtcgtt aaagtattca ttaatgatga tattataatt ttttataaga
    17101 ggtaatacat gaaaaaattg aaaacaaaaa aattgaaaga aagtgagttt ataagatata
    17161 tagaaaacaa tcctgttgtc tcaaaggctt tatgcgagga atatggaatc tgtactgaaa
    17221 caattgccta tgcattatat gttcatagca ataacttctt tcttaaaaac gactacgttc
    17281 aggatgacat tcactatgat atagttaaaa acaatttaat aataatgaaa cccacgctta
    17341 gacaatatta tagaagaaca aggcaagtag attataacgg atatactttt ttatcaggta
    17401 ttaaagaata tcaagactat tgtattttgt tgacgctttg ctgctatcat tggatagctg
    17461 atgtatttac tgtctataat catagtgaaa gaagtcaatt tatcgttgat gttgccaatg
    17521 atcttctgaa aaggagtata gatcattttt cagtagagca tgagaatgtt atcaactgct
    17581 ttaatatgtt aaaagaaaag ctcccatcgt ataaaaagaa ataataatcc aatttttcaa
    17641 atatcctcat tgactaacat atatataaga aatatatatg tatcatggaa ctataagagg
    17701 atagaaaatg agtgatattt cagataaaga gcaaaccaga aagaaaccac gaataaaaaa
    17761 gacactggag cagcaattag catctgctca gatgcgttta aatcgtttgc aatataagtc
    17821 taagaaagaa gctaaacaga tagaaacacg tcagaaaata attttagggg ctgaagttgc
    17881 caaggctctt gattgtgatg tttttacggt ggataaggat cttgttttag gtatgctact
    17941 agagatacct cacctacatc cagatgataa agaaagattt aaaagaagcg gaatgttatt
    18001 tctggcgagc atgaaaggaa ggaaaacttg ataatgcata taaactattt gacaagtatt
    18061 ttaggaaaag ttccaacaga taattatcgt taactttcat taaaagattt gacattctat
    18121 ttatgatgat atatctattt atttaaaatc tcataatctt atataatcag attctttcat
    18181 ctataaaatc ataaaaatat aattttaggt ttatatattt cacgtcctga caaatctcta
    18241 gcttaatttt aatatggctg gggatttgtt tttatctgta tcttgatttt tgtttgttat
    18301 ttgataatta attaatacgt gaatataaaa atggcgatga aaatgaaaaa acaaaataaa
    18361 aaagggttct cattacttga actcattttg gtgctgggtg tcggtagtat gatggctttt
    18421 atgcgttttc aggatatgaa aactgaacaa gaaaatgtta tggctaaggc tgttggtcaa
    18481 cagatgaagc agataggtga ggcggtaaat ggctatatca atatcagata tgacaagctt
    18541 tctacgctga cgtcaagcag tagtcagtca agcgatccgg gtccccgtac ttgtaatggt
    18601 tcaggttgtg aaataacgta tcaaacatta atcaatgaag gattattacc aacagcttac
    18661 actggtataa acgttaaaaa atctccatat aaaatactat taaaacgtga tggaactgct
    18721 cctaactatg ttattaatgg tcttataacg acatcgacgg catggattga aggcggtaaa
    18781 acacgttatg atttattagg gaatgccatg caaacagcag gtatagatag cggtatgact
    18841 aaaacaacat ctattgcttc tgggtatagt ggtcaatgga cagaaacgtc tgctaatttt
    18901 aataatatca catccactgg acaattagca tttagagttg gttttaatag tgcgttatat
    18961 tctgtatatt taagacggga tggaaccttg cccatgactg gcgatctaaa tcttgacgga
    19021 cataatatta acaatatcgc taatatcaat gctacaggaa atattacgac gacaagcgac
    19081 ctacaggcaa gaaatattaa agctacagga aaagttgatg ctgacggtga tatttcatca
    19141 ggaagatatt tgattgctaa aagcaaagat gaagatgcat caataaaaat tggaggcgat
    19201 ggcactggaa atcataattt tatgtttgaa tctcaaaaaa gaacatctgt tgtttttttt
    19261 ccaagcgtta attctgcatt gttaacttat aaatttcgtg ggaatataaa catattaagt
    19321 ccttctgggg attcagttgg tgttaaatta aatggcacca ctggaaatat cactgcctct
    19381 ggaaacatag aggccgccca aaatgtcaaa ggcgctacat tagaatccac tggacgcgct
    19441 acggtgggtg agtttgttca attgaacgga caggctgagg ttggaaaagt gtgtcaatct
    19501 aatggattac aaggaagaac agcaaaaggg aaaattttat cttgtgttaa tggtgtatgg
    19561 accggatcgg ttcaaataaa taatagtcaa tgtaaatggt tttccccggc taatgctttt
    19621 tcatactttg gagaatacag tgggcaactt catgaaaaac ctataatttg tccagcagga
    19681 tatattatga caggatctaa aatgtgggga tgggcagaag atgttgatga cgaacatgtt
    19741 gatatctatt gctgtccttt atcctaatta aaaaaggtta aaagttaaat cccatattca
    19801 taaaagattt tctgaggatg ggattaccat agctactctt actcacggaa gaaaaaaagc
    19861 tgaaatgtgt attttttata ttttaatttt gtgagttata aactggcctc ctaaaaggcc
    19921 agtttatata atttaaaggt tgctcattat ttctgtaatg gctgtggctc gaacatattt
    19981 tgctgcatta gtcgcttaaa ttttaactgt tgatgaaatg agaaattacc cggttcttga
    20041 ggataatcag gaaatatatt tgtctaagaa aagtgaaaaa atttctgagc caccaccttt
    20101 cgggtgggtt atcatgaaat gtaagtgagt tattcatcat gatattgtaa ggctagacaa
    20161 ctatatctta atattttgag tctggaatgt ttttggtact aaatgtgtcg ttaaagataa
    20221 taatcatttg acaaataata gcgattataa taaggaatgt taaatagtta caaaggagat
    20281 aagatgaata tttttgacga taatgattac gaaaaagcct gtaaatggta taagcatatc
    20341 agatctaatg ttgaaggttt taatgttaaa atagaaaagt taagagaaaa aacagcattg
    20401 gatttattaa ataatgaagg tgttgattat tttcataaag gttatcaatc gtttgttgag
    20461 cgctttgaaa aagtttttat caaatcattt ttggctcctt atttaaaggg gcctttttat
    20521 tcatctattg gtatttattc ttctatatat agttcttctt ccatcttgat ttttgtttgt
    20581 tatttgataa ttaattaata cgtgaatata aaaatggcga tgaaaatgaa aattaaaaaa
    20641 ggattctctt tattagagtt aactcttgtt ttaggtgttg ggacgatggt ggcttttatg
    20701 aagtttcagg atatgaaaaa tgaacaggag agtataatgg cttctgctgt cggtcaacaa
    20761 atgaaacaga tcggtgaagc agttaatggc tatataaata tccgttatga taaattatca
    20821 accttatcca atgctgccgg aacaggaacc gatccgggtc caagaacctg ttcaggttca
    20881 gtatgtgaaa ttacttacca gacattgatt aacgaaggtt tgctactttc aacctacaca
    20941 ggcactaatg ctaataaatc ctcgtataaa atcatattaa aacgagatgg aacttcacct
    21001 aactatgtta ttaatggtct tataacgaca tcgacggcat ggattgaagg cggaaaaaca
    21061 cgttatgatt tattagggaa agccatgcaa acagcaggta tagatagcgg tatgactaaa
    21121 acaacatcta ttgcttctgg gcatagtggt caatggtcag aaacgtctgc taattttaat
    21181 aatattacat ccgctggaca gttagcattt agagttggtt ttaatagtgc gttatattct
    21241 gtatatttaa gacgggatgg aaccttgccc atgactggcg atctaaatct tgacggacac
    21301 aatatcaaca atgtcgccgc acttaatgcc actggcaaca ttacgacgac aggtgacgta
    21361 caggcaagaa acattaaggc tactggaaaa attgatgcgg acggtaatat ctcagccggt
    21421 aattggatgt gggctaagaa tggatatggg gacgctatag gttttggtgg agatggatat
    21481 tctggaggtt taggtcgaga ttatgaaata aaaatgctat ctaaccatcc actaacgata
    21541 cattcaccaa cgtctagtcg cggaaatgat gttatattag atattgatgg aaatatgagg
    21601 gttcagactg atattagctc tcttagaaac attacagcct ctggaaacat agaatcatcc
    21661 caaaacgtca aaggcgctac attagaatcc acaggacgcg ctacggtggg tgaatttgtt
    21721 caattgaacg gacaggctga ggttggcaaa gaatgtcaat ctaatggatt acaaggaaga
    21781 acagcagaag ggaaaatttt atcttgtgtt aatggtgtat gggaaactat agatgctaat
    21841 ttaaaaatat caacatacag tttaaagcct ccaaaacatc aacttaatat gggagttcat
    21901 agtgtatgct ctttaagtaa tgtaaaattt tataaaggga ataacactcc atatattagc
    21961 tgtgaaataa taaaaaatgg aaataattgg ctttttcaga cagtttattc aacacaatgt
    22021 gaggctgtat gcataaacta aatcccataa ttactccgcg tcacgttcga ttgaatggaa
    22081 aaatcccaga tcttttcttt tttcttttaa aagactgaca tggtaatttt atattacata
    22141 tggagtgttg gttattctat tatataacat taaaaagagt ggatattaaa ataaaaaagt
    22201 gaagtatata attttataat ctcaaactat agagaaataa tctggaaatt gtttcataaa
    22261 tattaaatcc catattcata aatattttca gagaatgggg ttaccatagc tgctcctact
    22321 tacggaagaa aaaatgctga aatgtgtttt tttagatttt tattttgtga attataaaat
    22381 ggcctcctaa aaggccattt tatataattt aaaggctgct cattatttct gtaatggctg
    22441 tggctcgaac atattttgct gcattgattt tttctgcttt taaagcacta aaatgcgcag
    22501 ttccacaggc tatcttcgca tcttcttcat gaccaagacc aatgtgttta ctttttgtct
    22561 ctacaacaaa gtaaatatgt tcttcaccat tgtcttcaat aactaacgcc cagtcaggat
    22621 tgtaggttcc cagtggcgtc gggattttaa accatcccgg cagcttcaca taaagcttaa
    22681 cttcatcctg ttcttcgagt tcctgagcga aacggctttc gacttcagaa tctttaggaa
    22741 cgtattcgta aactgactta gacgaggttt caaaaagatt acgggcatat cctgttagct
    22801 ctttatccat aaagagactt tgcgcataca cctctccttt tagtggataa tatttaatac
    22861 catcaacaat tgacaggcgt ttgcagtagt tgattcggcc tatagcttca ctgataaact
    22921 gctgtggatt tttagcaaaa tcagcgagtc ttccactctc tttcaggatg gtgcttaaac
    22981 tgcgtcttgt cagtccggtt ttttcctgta gaacaccaag aatatctggc aatggctgct
    23041 ctgcaacatc aactacagag cttgttgttc cattagacag agctttaaca tcaaggccag
    23101 attgactttg tttgattgtt gctttgctga aactgaccat tgcttttgct acaggctgca
    23161 tttcagaaag tgatttcgta caggatttga tcaattcttc ttcatcaaat gctagccgat
    23221 acagcgtttt ttgacaaatg cgctgccata acgcttcgaa ttccgggctg tttaagactt
    23281 ctttccggta tttgattgtt ttacgttcat cagcattgtt tatattgagt cgccctgctg
    23341 atttacgcag gatagtttca atttgttcct gtagtgaggc atacttctca ctaacaacaa
    23401 aagtgttttc gaataattct tttttcaggg ttttggtaat ttttcccgat ttttcaatat
    23461 aaccttcagt ctgaagttca gaccagatat catgtgaacc ggaaatacct aaaccttgtg
    23521 aggaatcagc gaagataaga tgggcgaacg catctttttc aatcacacca aaacgtatgc
    23581 ctgtttcgct ctcaatttca gactgtaatc gttcagcgta ggcttcataa ttttcactgg
    23641 caacgactgt cagaatgtta atgctgtcat cacgaacacg ttcaccctct tggttaacac
    23701 acaggcgaag accacggcct aatgtttgac gacgttctcg ttcacttccc atctctcgga
    23761 ggctacagat ctggaataca ttggggttat cccagccttc tttcaaagca gagtgcgaaa
    23821 aaataaacct cactggattc gagaaactca aaagcttctc tttatttttc ataatgagat
    23881 tataaccacg ctcagcattt tcacggcctg tattattgct ttcgcttgtt tcagcccatg
    23941 cacctttttt atcaatggag aaataaccat catgaacatc tttggcatgt tctggatgag
    24001 aaggaagtaa atctttatag gcagggcttt tgattgcttt aagatattct tcttcaaaga
    24061 tacgggcata ttcacccggt tcacgtactc cttcttcatt ggtctgacga tataaatcaa
    24121 ccttatcaat gaaaaacagg gtaagaacct tgatttgctg agtattcagg cgaagttctt
    24181 tatccagatg ttcacggatt gtacgtctga tcatatgacg ctggatgagc atagggtcaa
    24241 tatcccccac gacatcaccg actttcatat agtaggtatc agaaggtgtt tccagtgtaa
    24301 gataaccctc tttgccagtt cggatctcgc ttatccggta accctgataa atatcacgtc
    24361 ctgtttcgtc atcgagtgtc ataccgtcat atacggtaat ctctgaacga tttacgttcc
    24421 cttttttatc ggctatatca acaataacag tcgcactaat gctattcttc ttattgttaa
    24481 tactgaccag ttttacatag gggctattac ttgcattttg gacttcaagc ccggcaacct
    24541 cgatctgttt gaccagtttt tggttgtaag catcaatggc gtcaaggcgg tacaccatat
    24601 gatgtttatg aacatgtgtt gctgaatagc gtaaggtgaa catggggtgc atagcatcaa
    24661 gtgcggtttt acccgcaccg ttcaagccac catcaacact ttgcggttca tcgacaataa
    24721 taattggacg tgtagcacgg attaaatcaa tgggcttatc cagatcgtcc acagttgttt
    24781 tttcactgga ctgatagagc ttgttaacat cttttttgtt aatcgcaccc acagtcatta
    24841 ccatgatctg cataacagaa ctggttgcaa aatttcgaac atccgcaggt tttgccgaat
    24901 catacagata gtattcgtat ggaactcccg caaacaggct tttaaaatgt tcttcagtta
    24961 tttgtagtgt tttataaacg ccttccttga tagcaactga aggaaccaca ataataaatt
    25021 tactcatgcc atagcgttta ttcagctcca gcatggtgcg aagataaaca tacgttttac
    25081 ctgtccctgt ttccatttcg acagtaaaat catggctgtc gagcacaggt gaaggtggaa
    25141 gctggttttt taactgaaca ttgttcagat ttttaagcag tacatcatct tcgggtattt
    25201 gtgggttaac aggcattgaa cctgttgcgc cttcaaatga gagtgcaccc tgagctgggg
    25261 ccagcacagt catttcgctt tcccatttct cttgcccttc aaacaaatca cagaccgatg
    25321 ttatggcgtt ttgctgatag gtaaggtcag attcaaaatg tagtttcatc tcattccctt
    25381 acaggctgtg caggttagtc aggccatgtt gttccagaat ggcgcaaaga tttgttttag
    25441 caacgttatt ttcaaatgcg tcatcaagga aatagcagac cgtatctttg ccagctttta
    25501 aactcttata ccagtcgatg atccccttgg tcagttcttc tactgaagat gcagggattt
    25561 gtttagcaaa gcaggtaaac aatttgccac cgtcaacaca agaaacggtt aatccatcaa
    25621 actgacgggt ttcaatgttt acactcaggt caatgccacg tttgagcatc aactctgtga
    25681 gcagatcttc ttcattacgg ccttcaagga ttgggcttac ataggcatca atctgttctg
    25741 aaagggtttc tgctgtggct tcccacggac ggatattaga tgtatcgagt ttgaaaacac
    25801 gaaaaccaac atcaccattc cagtcaggat tatcttcacg aaccttttta cctgcacggc
    25861 gtaggcgctc ttttgtgatt tctgatattt ttaaagacat tccatgcttc ttcaaaaaag
    25921 ctgctgcaat ggcttgttcc ttagtgtttt cgtcaactaa ttctggtagt tgcgcaatca
    25981 caaatttgat tttcctattc ttaattgcat tggctgtgaa aacagcgtga ccaaaagttc
    26041 ctgaaccgcc aaaaaaatca agtgctatgc attcctcatt agggtaagta gctatttcta
    26101 ttatgcgaag aagagtgcct aaaggttttg gtctagaaaa aacttctttg tcgaatccaa
    26161 tttcaataaa ttgttcactt cctctttcac tatttacgtc tctatgtgtc catgaggagg
    26221 tggcttttac cgcatccctt ttggatagat agtctttctc catgatgccc cacatttttt
    26281 tagtaggcat aaatttagcg tatacactct cgatttttgt ttttgctgta tcaaatcccc
    26341 atctccatcg gccatccgta ccatcatctc gaataggttt tatttcgata agaccatcat
    26401 ttttttgatc tttagagaca gataatttgt tttttacttc atcatagtag aaataataaa
    26461 acatatcagg tcgatcttgt cttcggtccg catcacctgt tttacgtaaa tccatatcac
    26521 gaaagacttc acctgcttca tcaatcttat tatatctttt taggatttta tcatcaggtt
    26581 caaacccata agttttagca tgggttatat tttttgtcat tacaagtata tattcatgag
    26641 cagttgctat gaatttatca tcagagcgac ctttaggatt gtttgtatta gctataagag
    26701 ctataaaatt ctcttctcca aatatctcaa aacataaact acataagtta tggacttcat
    26761 gttcgtcgat tgaaataaaa ataaagccag agtcagaaag taagtttctg gctaatttta
    26821 tacgggggta catcatattc aaccaatcgg tatgataacg accactggtt tctgcatttg
    26881 tacttacccg gacaccttct tctgtttgcc ctgtgatttc aagataattt ttcatattat
    26941 cttggaagtt atcaggataa acaaaatctt tcccggtgtt gtaaggagga tcaatatata
    27001 taagcttaac ttttccagtg tagctttttt gaagaagctt taacacttca aggttatcac
    27061 cctcgatcat gaggttcttg gtgttatccc aatcaacgct ttcatcttta catgggcgta
    27121 aggtgccacg ggaaggggta agagcaagct gacgagcctg acgcttacca tgccagttca
    27181 ggccatagcg ttcttctttt tcgtctacat tttcacccaa aagctgtttt aaaacgtcaa
    27241 aatcaatgcc gttttcatta aaggcttcag gaaacaatga tttaagcttg gtgatgttat
    27301 cagcagtgat attcattgat tgcagttcgg gcatttcagg cgaaagtttg ttcattgacc
    27361 attccacgta tctgtatcag gttactgtgt gatgggggat attttacggt aaagagtgca
    27421 tttcatcaat gaacagcgtg ctacagattt ctttttaaat cattatgtta atgcttttat
    27481 tgaatgttct gtcctcgtgt tagtacaatt agcttttctg cgtctaccaa acattatcag
    27541 gatgtgatga tggctaaact gaacaagaaa caactttctt tactcaagga aatgcctgca
    27601 gaacaactca tgcaaataat ttgtgatatt gcagaggata atggtcaggc aaaatccttt
    27661 cttattaatg aatatctgtt aactccagaa gaatcactga aaaaggctga ggctgaatac
    27721 aaaagggtaa ttaaaacaaa acgcttttat gattattatg aagcagcgat tttttttgag
    27781 gggctataca ggaatgtcat atttccactt gaaaagacgg tatcaacgct gcctgaaaaa
    27841 accgaggcgt tttgccatga tttactgctc tcatttgata aagtcagcga aattgctgat
    27901 acatcagatg gatcatggat ggactattat aatggtgctg tcgaaatatg gttaaaatcc
    27961 ctgtccctac aaaaagacaa aagtattgat gttatagcgg ataaaataat ttccgtactt
    28021 aaaggtgatg tgtattttaa ctttgatatt tttgataagt ataaaaaaga actgggatac
    28081 aatgttattc gtgttttaag ggaaagtctt cttaagacag gtgatgtcaa tggtgctgtt
    28141 gagttaagtc tgtatatcag ggatgttgat ttcatcaggc aatgctttga gaaaagaaaa
    28201 ctgaatcagc cagaatatat cattaagttt gctgagttgc tggttgatga actgtgtact
    28261 gaggaggcca ttcaggttct caataaaatc aaagaagata aatcagttga tcaggcaggg
    28321 cttcgtgata aatggactga ggtgttggct ctggcgttga ttgaagaagg cgagattcag
    28381 caggcaaaaa caatttgtat agacggattt aagaacaggt gtgatgttat tttttataat
    28441 atctataatc tggtggagaa aaataatgac tcactggatt tgttctctgg catagcaaag
    28501 aaaaaaggct ttccgtttgt tattcttttc ttgtccggga cagatagtta tggaaaactt
    28561 gattctgaag tcatgaatgc gagtgaaaat gaaatcgcag agatgatgtc tttattacgc
    28621 ggttcttttg ttcgtacctt atcgagtgag ctttacaggc atggttatgc atgttctgca
    28681 actctgctcc gtagagtgct ggcagaggac agtatcagtc gttctcagag taaatactac
    28741 acctatgcgg catctgatat gaaaaaaagc attgattaca gtaaagatat tgcatggact
    28801 gaaaaaatcc cttcaacaga agagtattta aaatctctgt ttattgagca caaaagaaaa
    28861 tacgcactct gggaaataat gctggaaaaa atcgctggtt tagcgataga gaaagattca
    28921 gtatcatatt cagcatagac tgtaattaag catgaagttg aaaggccgcg aacggccttt
    28981 ccctttattt atttgaatca aactcaaacg gcctgaccat atcgttgctg ttagcatcaa
    29041 ggaaatcagc ccaccactgg agcatcaggc ggcgctggtc aaggtgtttt gccttgtggg
    29101 tataagcagc acggacgcta ttgctttcct tatggctcat ttgaagctct acagcgtctt
    29161 ctgaccatag cccggactca attaaggcac tacaggccag agtgcggaaa ccgtgtccac
    29221 agatgtcctg ctttgtgtca tagcccatat tgcgaagcgc tttgttgatg gtgttttcgc
    29281 tcatgggttt aaacgagtca taacaaccag taaagattaa tccgtcatca tgaccttctt
    29341 cataagtcag ttgtcggatc tctttgagta tcttcatggc ctgcttacaa aggggaacta
    29401 agtgcttacg cttcatttta gccccacgag ttgaatgttt gacgttttca atcgcttcac
    29461 gctgttcggg tatcacccat aacttacttt tgaaatcaat ttctgaccag cgagcgaaac
    29521 gcagctcact ggaacgaatg aaaatcatca gattgagctg tattgccagt atggttaacc
    29581 tgcggccttt gtattcggca attttgttca gtaactgggg tatttcttcc agctcaagtg
    29641 cagggcggtg ttcagtttgt ggtttctgaa ctgcaccttc catatcatag gctgggttat
    29701 ggcgtatcag cttttgctgg acggcatgac gcaggattgc cgtaatgtat tgttgaatgc
    29761 gcatggcaac ttcaagataa ccaagagcct caactttttt caccggaacc agcagatcac
    29821 ccgtatccag ttcggcaaca tctttgtcac cgattaccgg gaagacataa gtttcaaggc
    29881 gcttccatac ggcatcacca taatcatcag accattttgt tttcgtggag aaccacgctt
    29941 tggctactgt tctgaaggag cgtgtattat cacgtttggc tttaagctct ttaacctctg
    30001 cctgtttctt tgcattaggg tcaataccct gagcaagaag ccttctggcc tcatcacggc
    30061 gctgtcttgc gtcagaaaga gaaacagcag ggtaaacacc aatagagaag agtttttgtt
    30121 tcccttcgaa gcggtaagcc atttgccagt atttcgaacc tttaggggta acacgaagga
    30181 acataccaaa gccatcagta agcttgtatt ccttctcaag gggttttgca ttttttgctt
    30241 taatatcagt cagtgacatg aaaacacccc ctcatttgtt ggtaaaaggg aaatcgaacc
    30301 agcattacca gcatttttac catcaaaatg atatggcttc gagtggtttt tagtgaacga
    30361 gggtgaacga ctgagagggg ataaccaatt gatagaaatg cagaaagcag acgttagtga
    30421 acgtctgctt tcttgaaaat ggctcctctg actggactcg aaccagtgac atacggatta
    30481 acagtccgcc gttctaccga ctgaactaca gaggaatcgt gtgaacgggg cgcatagtaa
    30541 cgatgtgcga tcggcttgtc aaagggggaa ataagattgc gcgtttgttt gctgacaaaa
    30601 acaacaaagc gttgaagttt tgatctaatt cctactttgc cccggcatgg cgcaactttg
    30661 tctgtcattg cacaagtcaa atgctgtgac cttaccgcaa tggctatgta ccagcgcctg
    30721 atgaggcgtg aaaaattggc aggcacttgg caaataattc tgagacataa cgccgtagag
    30781 attaagggca gggggcagaa tgaactttag acgtgaaata ttttgtgaaa atggttgata
    30841 caggcagtct gacgccggta gcggaaatgg cagataaatt tctggtgcag gcgaaaagat
    30901 ttccgtcaat atcacaggca gaattatggc aaaccagctt taccagcaaa agggtatggc
    30961 ttcgagtggt ttttagtaaa cgagagtaaa cttgaagaag gggataatca gttgatataa
    31021 atgcagaaag cagacgtcag tgaacgtctg ctttcctaaa tctggctcct ctgactggac
    31081 tcgaaccagt gacatacgga ttaacagtcc gccgttctac cgactgaact acagaggaat
    31141 tgtttcaacg aggcgttgaa tactgggccg gctataacgt gtcaacagta aaattaacgc
    31201 gccaattcaa ttggttaatt aacccacaaa gtgaggaatt aatgttcgga ttcctcgccg
    31261 tagtcgcctt cggcagcgct tacccgtaag cgctgagaag gatcctggcg atagaactgg
    31321 caaaaacgct gccatagcgc cgggaaacgt ggagcaaaca gttctggcgc gctgaaaaaa
    31381 tactctgaca acacggcaaa acattctgca gggtcggtgg cggcataggc atctatactg
    31441 gcagcgcttt cgccaacaag atcgatttca tcctgaatat tattcattgc cgcgtggaga
    31501 tcgtgttccc agccagccac atcgcgtaac gggatgaaag ggatgccgct ggcgcgatcg
    31561 ccattacgca tatccagttt gtgcgcaact tcatgaataa tgaggttgaa acccgaagca
    31621 tcgaacgagt cctgggtatc cagccagttc agaatgatgg gcccttgttg ccagctttgc
    31681 cccgactgta cgacacgctg gctgtgcacc agacctatgt catcttccca ttcatcatct
    31741 accacaaagg gcgcgggata aatgagcact tcatgaaaac catcaagcca ctcaataccg
    31801 agctccagga tcggtaagca aaaaattaac gcaatacgtg cactttttaa cgagtcgagc
    31861 tcaaatccct gtagcgctac cagtcttttc tgctgcaaaa aacgttcggc tagcgcaata
    31921 agccgagcct gttcttgcgc ggtgaggttt accagaagag gtatagccag cgcatcatcc
    31981 cacggccagt cttcgttctg ggttatttct tgtgctttcc agggccactt aatcatcgtt
    32041 ttgctcgtaa actcgtcact tgaacaaaat tacccgaata gggtctgtta aaatgccaaa
    32101 ttacctggca tcattgcaat atacggagag atgccggagc ggctgaacgg accggtctcg
    32161 aaaaccggag taggggcaac tctaccgggg gttcaaatcc ccctctctcc gccacaattc
    32221 aaacacttag ctcatcttct ttcagcgatc agtctcacac ttagaataca cttagagtat
    32281 tctgttagaa tattacgtga aaaacgtatc gccatcttat gctttttctg ccagaagagg
    32341 gggccaggga tggtgttatt tttacttttc gatcataagt caactcctgg ttttctgccc
    32401 cgctatttcg ctgtacccca tcgggattca cagtgatgtc acttgcggcg acttaacgcc
    32461 gtcgtcctcg gtaatcgtcg cacccggcct gttgcccgaa atgttcccct gtagacatgg
    32521 gcgccgggca gaagattaat tgctgtcagg gaaacgcgct ggcgcgtggc gataacttac
    32581 gctgcgggac tgtcgacgct gtacagaaaa tctggcctcc agactggctt aaatatgcac
    32641 acatgacaat acaaccggaa aatttacaaa acgcataatt tgaactgaga gagaaactta
    32701 caaacgaagc gacgaagatt taaacagtcg tagcgactcc ggtatcttgc gcgcatgttc
    32761 aaataacact actgtatata aaaacagtat tcgaggtatg gattatggaa tttttcagac
    32821 ctacagagtt gcgcgaaatt attcctctcc catttttcag ttacttagtg ccgtgtggat
    32881 tccccagccc cgcggcggac tatattgagc agcgtatcga tcttaatgag ttgctcgttt
    32941 ctcatcccag ctcaacatat tttgtcaaag caacggggga ttcaatgatt gaagcaggca
    33001 tcagcgacgg tgacctgctg gtggtggata gctcacggaa cgctgaccac ggtgacattg
    33061 taattgcggc aattgaagga gagttcaccg taaagcggtt gcagttgcgt ccgacagtgc
    33121 agttaatccc catgaacggc gcctatcgac ccatacctgt cggcagtgaa gacacgctcg
    33181 acatattcgg ggtggtgacc tttatcatta aagcggtcag ttgattatgt tcgcgctctg
    33241 cgatgttaat agcttttacg cctcctgcga aacggtcttt cgtcctgatt tatgtggccg
    33301 accggtggtg gtgttatcaa acaatgatgg ctgcgttatc gcgtgtagcg ccgaggcgaa
    33361 acaactcggt atcgcagcag gtgagccata cttcaaacag aaagaacgct tccggcgatc
    33421 cggtgttgtt tgcttcagca gtaattacga gctttacgct gatatgtcga accaggtaat
    33481 gaccacacta gaggagatgg tgccgcgggt agaaatttac agcattgatg aggctttttg
    33541 tgatctgacg ggggtacgaa actgccggga tctgacagat ttcgggcacg agataagagc
    33601 gacggtcctg aagcgcacgc acctgactgt cggtgtaggc attgcccaga cgaaaaccct
    33661 tgccaagctg gctaaccatg ctgcgaaaaa gtggcagcgc cagaccgacg gggtggttga
    33721 cctgtcgaac atcgatcgcc agcgtcggct gctggccctg atacccgtag aggatgtctg
    33781 gggtgtcggc agacgcatca gtaagaagct caatgccctg ggcatcaaga ctgctctcga
    33841 tctctctgaa caaagtacct ggatcatcag gaaacacttc aatgtcgtgc tggagcgtac
    33901 cgtgagagag cttcgcggag agccatgtct ggagcttgaa gagtttgcgc cggcaaagca
    33961 ggaaatcgtt tgtagccgct ctttcggcga gcgggtcaca gactatgagg aaatgcgcca
    34021 ggctgtttac agctacgctg cgcgcgcggc agaaaaactc cgcggcgagc accagtactg
    34081 ctgtttcatt tcaacattcg tcaaaacatc accctttgcc ctgaacgagc cctactacgg
    34141 taacagcgcc gcggtgacgc ttctcacccc cacgcaggat tcacgtgaca ttatcaatgc
    34201 ggctgtgaaa tgtctggata aaatctggcg cgacggccat cgctaccaga aagcgggggt
    34261 gatgctgggt ggcttcttca gccagggcgt agcgcaactc aaccttttcg acgataacgc
    34321 gccgcgcgcc ggtagtgcga agttgatgga agtactggac catcttaacg caaaagacgg
    34381 gaaggggacg ctgtacttcg ccgggcaggg gatgtcgcaa cagtgggcta tgaagcgaga
    34441 aatgctttcg cctcggtaca ccacaagata ctctgatcta ctgcgtgtta agtaacttgt
    34501 gcgatcaatg cctgagatag ttgctaaatc gtccccgttc ttttggtcgc acaagatcac
    34561 aggaacctct cacgataatg cgcatgtatc ctggtttacg acatcaggaa atgtggcgcg
    34621 tttattgcca ggcaggcgtt gtgagacgta acttatttac gcctggtttc agccgtagcg
    34681 atgggcatgg ataaaaagag tatggcaatc agcgtgataa tgctaaaaaa caattaatat
    34741 ttttttaaca aaactaaagc ttgctatgtt cagttaacca tgcgttaatg gttgtgcggt
    34801 ttgatacaaa cttatctgaa gtagtgattg taatatttct catcatttgt tcctcttgag
    34861 atctccttta ggtttttttc tctctgataa ttttcttcag gccatttcgc ccaagggctc
    34921 attcaaaagg taacaatatt atgacgacga aaatcactgg tttagtaaaa tggtttaacc
    34981 ctgaaaaggg ctttggtttc attacgccta aagatggcag caaagatgtg tttgtgcatt
    35041 tttccgccat tcaaagtaat gaattccgca ctctgaatga aaatcaggaa gtggagtttt
    35101 cagcagagca gggaccaaaa ggtccatcag cggtcaacgt tgtggcgctt taaggcaact
    35161 gatattacta ataaaattca cttccggtgt ccatgttgcc atggttcaca atacagaaca
    35221 tcgacattcg atgttactga gcaaaacccg tttggcgcga aatgtatttt ttgtaagtca
    35281 accatgatca cttttgataa tgttggatta tacattcgct caggacaggt tccgctagat
    35341 tttagaaaat aattcatatt agctccgtac aggagctttt tttatgcccg gatgattatc
    35401 atctatagac gctgacatcc atcatctata gtggcattta cctttcccca aaggtgttat
    35461 ttctcttgca gacagcgcct gaaaagagcg acgttgtctt catctatccg atgaagcctg
    35521 gtcacctgtc tttgcgccgt tatccgttat ttaattcttg ccctataata acaagcccgc
    35581 gctaagcacg ggcttgaata acataaagcg tcttagaact ggtagaccag accaacacct
    35641 acgatatcat cggttgcaat accgttgttt gcgtagaagt catcatcttc gtccagcagg
    35701 ttgattttat aatcaacgta ggtggacata tttttgttga agtagtaagt cataccgacg
    35761 tcaacatatt taaccagatc tttgtcggtg taacgccagt tgccacgatg gacttcctga
    35821 ccgcctaaat ctttgccctt agactgcaag taggcgatgg acggacgcag accgaaatcg
    35881 aactggtact gcgcaaccac ttcaaagttc tgggttttgt tagcaatact gccattacct
    35941 tcgccattgc cgccgccata ataggtcatg ttgcgggttt cagcgtacat ggccgccagg
    36001 taaacattgt aggcgtcata tttggcacct atggtccagg cttcagcggt ttcaccgccg
    36061 gcatagttgt tgcgctcatt catgccgtcg ccataaccac gagcaacctg attgtccgaa
    36121 cggtcagagg aagagtaggc cgcacccagg cttaacccga agtcaaagtc gtaggaggta
    36181 gacataccga aaccgtcgcc gttttcacgg gccagtttgc ggttgccgcc gttacctgta
    36241 ccttcaccag caccagcacc gccgttttca ttattaccct ggtactgcaa cgcgaagttc
    36301 aggccttcca ccagaccgaa gaagtcggta ttacggtagg tggcaacgcc gttggttctg
    36361 cccagcatat agacatcggt ctgggtataa gtatcaccgc cgaattccgg cagcgcatcg
    36421 gtccaggctt caatgtcgta gataacacca tagttacggc cataatcgaa agagccgtac
    36481 tcgccgaatt tcagaccggc aaagcccaga cgagtccagg agtttgcacc ttcgccttcg
    36541 gtggtgttca ccttaatgtt gtattcccac tgaccatagc cggtcagcat atcgttgatc
    36601 tgcgtttcgc ctttaaagcc aatacgggcg taggactgat cgccatcgtc gcctgcattg
    36661 tcagagaagt aacgcagacc atcaactttg ccgtacaggt cgagtttgtt gccattttta
    36721 ttataaattt cagccgcatt tgctgcgcct gccactaata acgccgggac aagcagtgcc
    36781 agaacttttc tgttcattat gtattccctt atgataataa tttatatgaa tatgtagcca
    36841 cttcaacaaa actacaaatt gatactattc tatgaagttc atggaattta aaaaataaca
    36901 tgtaacaaag atatttaaaa tatttcaatt tgtttctatt tggtttttta taatacagga
    36961 tatataagtg actaagaata tatagtctat aattatcatt ttttatcaat gagttatgtg
    37021 ttttgatttg atggctgctg gcgtgaatat aatttgtttt ttatatgtat ttgatgcttt
    37081 gattatgaaa aagcataaaa aaaaaccggc ataaatgccg gtaatgtggg taatgataaa
    37141 ataaatgata aaaggctaat aaccgaatca ttctgacatt taatgctaat aaaataaaac
    37201 gctatcgcgg tgcgtaaaaa taagttgttc tggttatggg ttattctgca tcagagtgcg
    37261 attcaattac cattccctta tttaacagca ggttcagcgc cagacgcaac attaactgag
    37321 aataaactat ttgtggaatg aataaccaga acaggtggat aaggtattcc atggtcgaaa
    37381 tgtgactaat atcacattat aatgtaatta atgtcatatg acttacatca caaaagcgga
    37441 gtaaagtttg agtaccaggg aggacaacgc cacccgtagc atgggcggta aattagcgtt
    37501 atgggttttt tatacctttt gcggctactt catctgggcg atggcgcgtt gcgtgtggct
    37561 gatgtccgcc atacaaaccg agccggttct cggcccaatc agcactcctg gcagcgcaac
    37621 ggaaaaatgg cttaacgcgc tttcgctggg cgtcgtctgg cttattctgg ggagtattgc
    37681 ctggtacacc cggcctcgca aaaacagggg gtatcccgcc gacactcagc cagaaacgcg
    37741 caagcacgca aggatgtaaa gtggtggcgg atatgtcagg atagcgaacc ctgtgctcag
    37801 gcatgtaata aaaatggtct gctataaaga gagggcgtat ggactcagga tactggcaat
    37861 cgcagtttga agactggcta cgtcaccacc accaggaaca ggatgccgcc catgacatct
    37921 tccattttcg tcgtgtttgg gcaaccgcgc aaacgctcgg ggaaaacagt cctgtcgact
    37981 ggctggtggt gctatcggca tgttatttcc atgacatcgt cagcctggcg aaaaatcatc
    38041 cgcagcggca tcgttcttcc attctggcgg cggcagaaac ccggcgtatt tttctgcggg
    38101 attttcctga ctttccggca gaaaaactgg cgggcatttg tcatgctatc gaagcgcata
    38161 gcttcagcgc aaaaattgcg cctaccacgc cagaggcaaa aatcgtacag gatgcagaca
    38221 ggctggaggc gttgggcgcc attggtctgg cgcgggtctt cgcggtctcc ggcgcgctgg
    38281 gcgtcgcgct gtttgatgcc gacgatccct ttgccaacag acggcctctt aacgataagc
    38341 aattcgcgct cgaccatttt aaaaccaaac tgctgaaact gccgctgacg atgcagaccg
    38401 aacggggcaa gcacctggcg cagcgtaatg cggattttct ggtgtcgtac atggcgaaac
    38461 tgagcgctga gctgaaaggc gactatgaaa cacgggatga tgcggtcatc cagatgtttg
    38521 ctacgtatca gtaacccctg ccgctgaaac gtaaaccgcg tcattttatg ttagtctgtc
    38581 ggcaattatt tttggccggt taaatgtatg caggaaaata tttcagtaac acacgcccgg
    38641 aacctcatcg ccgacgacgc cggaagcgag atccaggcga tgctgagtca attgctggaa
    38701 atctacgatg ttaaaacgct ggtggcgcac cttaacggcc tgggcgaaca gcactggagc
    38761 ccggccatct tcaagcgcgt aatgatgaac gcggcatggc atcgtttgag cgacaatgaa
    38821 ctcagctgtc ttaaaacaga gttgccgacg ccgccagcgc atcatccaca ttacgccttt
    38881 cgttttatcg atctcttcgc gggcatcggc ggcattcgcc gcggatttga agcgataggc
    38941 ggacagtgcg tgtttaccag cgaatggaat aagcacgcgg tacggacata taaagcgaac
    39001 tatttttgcg atccgctgca acatcgcttt aatgaagata tccgcgatat cacattgagc
    39061 caccgggaag gggtcagcga tgatgaggcg gcggaacaca ttcgccagca tattccgcaa
    39121 catgatgtcc tgctggcggg ctttccctgt cagccatttt ctctggcggg cgtttccaag
    39181 aaaaatgcgc tgggccgcgc ccacggcttt gcctgcgaga ctcaggggac gttatttttt
    39241 gatgtcgtaa gaattatcga cgcccgccgc cccgcgctgt ttgtgctgga aaacgtgaaa
    39301 aaccttaaaa gtcacgacca gggcaacacc ttccgcatta ttatgcaaac gctcgatgaa
    39361 ctgggatatg acgtggcgga tgccgctgac aatggcccgg acgatccgaa aattatcgac
    39421 gggcagcact ttcttcctca gcatcgggaa cgtattgtgt tggtgggatt ccgtcgcgat
    39481 ttaaacctga aaaccgattt tacgttacgc aatatcgccc gttgttatcc accgcgccgt
    39541 ccgacgctgg cagaactgct ggagcccgtc gtcgaagcca aatatatcct gacgccggtg
    39601 ctgtggaaat atttatatcg ctacgcgaaa aagcaccagg cgcggggaaa cggttttggc
    39661 tatggcatgg tttatcctga caatccggaa agtgtggcgc gcacgttatc tgctcgctac
    39721 tacaaagatg gcgccgaaat tctgatcgat cgtggttggg atatggcgaa aggcgaagtg
    39781 aatttcgacg atgctggcaa ccaacaacat cgtccccgcc gactcacgcc gagagagtgc
    39841 gcgcgtttaa tgggatttga ggcgccgcaa acgtaccagt tcaggatacc tgtctcggat
    39901 acgcaggcct atcgccagtt tggcaactcc gtggtggtgc cggtatttgc cgcggtagca
    39961 aagctgctgg aacccaaaat tcaccaggcg gtgacgctgc gtcagagaga gacggcagat
    40021 ggcggacgtt cacgataaag ccacgcgcag taaaaatatg cgcgcgatag cgacccgcga
    40081 tacggcgatt gaaaaacgcc ttgctggcct gttaagcgcg caggggatta cgtttcatac
    40141 tcaggacacg acattaccgg gcaagccgga ctttgtggtg aatgactatg attgtgtgat
    40201 ttttactcac ggctgctttt ggcatcatca ccactgttat ctattcaaag taccggccac
    40261 gcgaacggct ttctggctgg aaaaaatcgg taagaacgtt gagcgcgatg agcgtgatat
    40321 tcagcgttta caggcgcttg gctggcgggt actgatcgtc tgggagtgcg ccttgcgcgg
    40381 gcgagcgaaa ttgagcgacg cggcgtt
//
LOCUS       DAGWFR010000017        38374 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.017, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000017 DAGWFR010000000
VERSION     DAGWFR010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 38374)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 38374)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..38374
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.017"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..243)
                     /locus_tag="MOX77_001053"
     CDS             complement(<1..243)
                     /locus_tag="MOX77_001053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-phosphate reductase"
                     /protein_id="HCA3356663.1"
                     /translation="MLEQMGIAAKAASYKLALLSSCEKNRVLEKIADELEAQMESILS
                     ANVQDVEQARANGLSEAMLDRLALTPARLKAIADDVR"
     gene            complement(255..1358)
                     /gene="proB"
                     /locus_tag="MOX77_001054"
     CDS             complement(255..1358)
                     /gene="proB"
                     /locus_tag="MOX77_001054"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HCA3356664.1"
                     /translation="MSDSQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHR
                     IVIVTSGAIAAGREHLGYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQML
                     LTRADMEDRERFLNARDTLRALLDNHIVPVINENDAVATAEIKVGDNDNLSALAAILA
                     GADKLLLLTDQQGLFTADPRSNPQAELIKDVYGVDDALRSIAGDSVSGLGTGGMSTKL
                     QAADVACRAGIDTIIASGSKPGVIGDVMEGISVGTRFHAQASPLENRKRWIFGAPPAG
                     EITVDEGATAAMLERGSSLLPKGIKSVTGNFSRGEVIRICNLQGRDIAHGVSRYNSDA
                     LRRIAGHHSQQIDAILGYEYGPVAVHRDDMITR"
     gene            1641..2693
                     /gene="phoE"
                     /locus_tag="MOX77_001055"
     CDS             1641..2693
                     /gene="phoE"
                     /locus_tag="MOX77_001055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoporin PhoE"
                     /protein_id="HCA3356665.1"
                     /translation="MNKSTLAIVVSIIASASVHAAEVYNKNGNKLDVYGKVKAMHYMS
                     DYDSKDGDQSYVRFGFKGETQINDQLTGYGRWEAEFAGNKAESDSSQQKTRLAFAGLK
                     LKDIGSFDYGRNLGALYDVEAWTDMFPEFGGDSSAQTDNFMTKRASGLATYRNTDFFG
                     IVDGLDLTLQYQGKNEDRDVKKQNGDGFGTSVSYDFGGSDFAVSGAYTLSDRTREQNL
                     QRRGTGDKAEAWATGVKYDANDIYIATFYSETRNMTPVSGGFANKTQNFEAVIQYQFD
                     FGLRPSLGYVLSKGKDIEGVGSEDLVNYIDVGAIYYFNKNMSAFVDYKINQLDSDNTL
                     GINDDDIVAIGLTYQF"
     gene            complement(2744..3145)
                     /gene="crl"
                     /locus_tag="MOX77_001056"
     CDS             complement(2744..3145)
                     /gene="crl"
                     /locus_tag="MOX77_001056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma factor-binding protein Crl"
                     /protein_id="HCA3356666.1"
                     /translation="MTLPSGHPKSRLIKKFTALGPYIREGQCEDNRFFFDCLAVCVNV
                     KPAPEKREFWGWWMELEAQEKRFTYRYQFGLFDKEGNWTVVPINETEVVERLEYTLRE
                     FHEKLRDLLISMELALEPSDDFNDEPVKLSA"
     gene            complement(3203..4447)
                     /gene="frsA"
                     /locus_tag="MOX77_001057"
     CDS             complement(3203..4447)
                     /gene="frsA"
                     /locus_tag="MOX77_001057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase FrsA"
                     /protein_id="HCA3356667.1"
                     /translation="MTQANLSETLFKPRFKHTETSTLVRRFNRGSQPPMQSALDGKNV
                     PHWYRMINRLMWIWRGVDPREILDVQARIVMSDAERTDDDLYDTVIGYRGGNWIYEWA
                     KQAMDWQQKACQEQDAMRSGRYWLHASTLYNIAAYPHLKGDELAEQAQALANRAYEEA
                     AQRLPGSLREMEFAVPGGSPVTAFLHMPKGDGPFPTVLMCGGLDAMQIDYYTLYERYF
                     APRGIAMLTLDMPSVGFSSKWKLTQDSSLLHQHVLKALPNVPWVDHTRVAAFGFRFGA
                     NVAVRLAYLEAPRLKAVACLGPVVHALLSDPQRQSTVPEMYLDVLASRLGMHDASDEA
                     LRVELNRYSLKVQGLLGRRCPTPMLSGFWKNDPFSPEEESRLITTSSSDGKLIEIPFN
                     PVYRNFDHALQEITDWINHRLC"
     gene            complement(4536..4994)
                     /gene="gpt"
                     /locus_tag="MOX77_001058"
     CDS             complement(4536..4994)
                     /gene="gpt"
                     /locus_tag="MOX77_001058"
                     /EC_number="2.4.2.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine phosphoribosyltransferase"
                     /protein_id="HCA3356668.1"
                     /translation="MSEKYVVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGA
                     LLARELGIRHVDTVCISSYDHDNQRELKVLKRAEGDGEGFIVIDDLVDTGGTAVAIRE
                     MYPKAHFVTIFAKPAGRPLVDDYVIDIPQNTWIEQPWDMGVVFVPPISGR"
     gene            5243..6700
                     /gene="pepD"
                     /locus_tag="MOX77_001059"
     CDS             5243..6700
                     /gene="pepD"
                     /locus_tag="MOX77_001059"
                     /EC_number="3.4.13.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytosol nonspecific dipeptidase"
                     /protein_id="HCA3356669.1"
                     /translation="MSELSQLSPQPLWDIFAKICSIPHPSYHEEQLAEHIVSWAKEKG
                     LYVDRDQVGNILIRKPATAGMENRKPVVLQAHLDMVPQKNSDTVHDFTTDPIRPYIDG
                     EWVKARGTTLGADNGIGMASALAVLADDNVVHGPLEVLLTMTEEAGMDGAFGLQSGWL
                     QADILINTDSEEEGEIYMGCAGGIDFTSNLPLTREAVPAGFACFKLTLKGLKGGHSGG
                     EIHLGLGNANKLLARFLAGHAEELDLRLIDFNGGTLRNAIPREAFATLAVATDNVGAL
                     KTLVNAYQDILKNELAEKEKNLTLQLNEVASDKAALTAPSRDTFVRLLNATPNGVIRN
                     SDVAKGVVETSLNVGVVTMSDANVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEA
                     KGSYPGWQPDANSPVMHLVRETYQRLFNKTPNIQIIHAGLECGLFKKPYPDMDMVSIG
                     PTITGPHSPDEQVHIESVGHYWTLLTELLKAIPAK"
     gene            complement(6855..7469)
                     /locus_tag="MOX77_001060"
     CDS             complement(6855..7469)
                     /locus_tag="MOX77_001060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor H"
                     /protein_id="HCA3356670.1"
                     /translation="MILLQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEP
                     GRLPDTLRSALVSLDGEKAMAFSERWCGTLLWICTSPYRPHHGRKNWYVGIGRFSADE
                     HIQSDEIRFETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLL
                     IAWRLEQQRQNECAALKSERRLFHHQIERGNPLRIFKGMAFTPQ"
     gene            complement(7466..8605)
                     /locus_tag="MOX77_001061"
     CDS             complement(7466..8605)
                     /locus_tag="MOX77_001061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006895405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA ligase RtcB family protein"
                     /protein_id="HCA3356671.1"
                     /translation="MGNYIRPLSDVVFSIASDNLWIEDSAIQQLYTTAKLTGMKRVIG
                     MPDLHPGRGYPIGAAFFSRGRFYPALVGNDIGCGMALWQTDILGRKYNADKLEKRLAS
                     LPDVADAQWLEENVPAVMQHHSWRSALGSIGGGNHFAELQQVDRIVDADSFALSGLQK
                     AQLLLLVHSGSRGLGQAILRRHVEAFSHNGLPEDSDDARHYLAEHDDALAFARSNRAL
                     IARRILQQLRAEGEPRLDVAHNFVEPCTVAGEAGWLHRKGATPDGQGLVIIPGSRGDY
                     SWLVKPVVSEESLFSLAHGAGRKWMRTECKDRLSAKFTPRQLCRTGMGSRVICRDRQL
                     IYEEAPQAYKSIDSVVDCLADAGLITPVACLRPVLTLKTSGEKSA"
     gene            complement(8824..9879)
                     /gene="dinB"
                     /locus_tag="MOX77_001062"
     CDS             complement(8824..9879)
                     /gene="dinB"
                     /locus_tag="MOX77_001062"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HCA3356672.1"
                     /translation="MRKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVISTA
                     NYPARQFGVRSAMPTAMALKLCPHLTLLPGRFDAYKEASRHVRDIFSRYTSLIEPLSL
                     DEAWLDVTDSPHCYGSATLIAREIRQTIFNELQLTASAGVAPVKFLAKIASDLNKPNG
                     QYVITPADVPDFLKTLPLAKIPGVGKVSAAKLENMGLRTCGDIQQCDLAMLLKRFGKF
                     GRVLWERSQGIDERDVNSERLRKSVGVERTLAEDIHEWSDCEAIIEHLYPELERRLAI
                     VKPDLLIARQGVKLKFNDFQQTTQEHVWPQLNKEDLITTARKTWDERRGERGVRLVGL
                     HVTLLDPQLERQLVLGL"
     gene            10129..10869
                     /locus_tag="MOX77_001063"
     CDS             10129..10869
                     /locus_tag="MOX77_001063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase"
                     /protein_id="HCA3356673.1"
                     /translation="MRKIAFFLAMLLMPCVSFAGLLSSSSPVTPVSKEYKQQLMGSPV
                     YIQIFKEERTLDLYVKMGEQYQLLDSYKICNYSGGLGPKRRQGDFKSPEGFYSVQRNQ
                     LKPDSRFYKAINIGFPNAYDRAHGYDGKYLMIHGACVSVGCYAMTDSGIDEIFQFVTA
                     ALVFGQPSVQVSIYPFRMTDANMQRHKYSYYKDFWAQLKPGYDYFEQTHKPPTVSIVD
                     GRYVVSKPLSHEVVQPQLASNYTLSEAK"
     gene            complement(10840..11607)
                     /locus_tag="MOX77_001064"
     CDS             complement(10840..11607)
                     /locus_tag="MOX77_001064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II glutamine amidotransferase"
                     /protein_id="HCA3356674.1"
                     /translation="MCELLGMSANVPMDICFSFTGLVQRGGGTGPHKDGWGITFYEGK
                     GCRTFKDPQPSYHSPIAKLVQNYPIKSCSVIAHIRQANRGEVALENTHPFTRELWGRN
                     WTYAHNGQLNGYKSLETGNFRPVGETDSEKAFCWLLHKLTQRYPRTPGNMTAVFKYIA
                     TLATVLREKGVFNMLLSDGRYVMAFCSTHLHWITRRAPFGVATLVDQDMEIDFSSQTT
                     PNDVVTVIATQPLTGNETWQKIMPGEWALFCLGERII"
     gene            complement(11771..12349)
                     /gene="lpcA"
                     /locus_tag="MOX77_001065"
     CDS             complement(11771..12349)
                     /gene="lpcA"
                     /locus_tag="MOX77_001065"
                     /EC_number="5.3.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-sedoheptulose 7-phosphate isomerase"
                     /protein_id="HCA3356675.1"
                     /translation="MYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAG
                     GKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAISDVSHISCVSNDFGYDYIFS
                     RYVEAVGREGDVLLGISTSGNSGNVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEI
                     RVPHFGYADRIQEIHIKVIHILIQLIEKEMVK"
     gene            12589..15033
                     /gene="fadE"
                     /locus_tag="MOX77_001066"
     CDS             12589..15033
                     /gene="fadE"
                     /locus_tag="MOX77_001066"
                     /EC_number="1.3.8.7"
                     /EC_number="1.3.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase FadE"
                     /protein_id="HCA3356676.1"
                     /translation="MMILSIIATVVLLGALFYHRVSLFLSSLILLAWTAALGVAGLWS
                     IWLLVPLAIILVPFNLTPMRKSMISAPVFRGFRKVMPPMSRTEKEAIDAGTTWWEGDL
                     FQGKPDWKKLHNYPQPQLTAEEQAFLDGPVEEACRMANDFQITHELADLPPELWAYLK
                     EHRFFAMIIKKEYGGLEFSAYVQSRVLQKLSGVSGILAITVGVPNSLGPGELLQHYGT
                     EEQKNHYLPRLARGQEIPCFALTSPEAGSDAGAIPDTGVVCMGEWQGQQVLGMRLTWN
                     KRYITLAPIATVLGLAFKLSDPDRLLGGEEELGITCALIPTSTPGVEIGRRHFPLNVP
                     FQNGPTRGNDIFVPIDYIIGGPKMAGQGWRMLVECLSVGRGITLPSNSTGGVKSVALA
                     TGAYAHIRRQFKISIGKMEGIEEPLARIAGNAYVMDAAASLITYGIMLGEKPAVLSAI
                     VKYHCTHRGQQSIIDAMDITGGKGIMLGESNFLARAYQGAPIAITVEGANILTRSMMI
                     FGQGAIRCHPYVLEEMAAAQNNDVNAFDKLLFKHIGHVGSNTVRSFWLGLTRGLTSHT
                     PTGDATKRYYQHLNRLSANLALLSDVSMAVLGGSLKRRERISTRLGDVLSQLYLASAV
                     LKRYDDEGRHEADLPLVHWGVQDALYRAEQAMDDLLQNFPNRVVAGLLTAMIFPTGRH
                     YLAPSDKLDHAVAKILQVPNATRSRIGRGQYLTPAEHNPVGLLEEALRDVIAADPIHQ
                     RICKELGKNLPFTRLDELARNALAKGLIDKDEAAILAKAEESRLRSINVDDFEPEALA
                     TKPVKLPEKVRKVEAA"
     gene            15142..15909
                     /locus_tag="MOX77_001067"
     CDS             15142..15909
                     /locus_tag="MOX77_001067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HCA3356677.1"
                     /translation="MSGLKITLLQQPLVWMDGLANLRHFDRQLELVSGRDVIVLPEMF
                     TTGFAMEAANNSLSQDSVITWMQAKARQTDALIAGSAALQTERGAVNRFLLVEPEGKV
                     HLYDKRHLFRMADEHQHYAAGDKRIIVQWRGWRILPLICYDLRFPIWSRNRNDYDLAL
                     YVANWPAPRSLHWQTLLTARAIENQAYVAGCNRVGTDGNGLHYRGDSRIINPQGDIIA
                     TAEPHQATRIDADLSLVALQDYREKFPAWRDADPFTL"
     gene            16219..16626
                     /locus_tag="MOX77_001068"
     CDS             16219..16626
                     /locus_tag="MOX77_001068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HCA3356678.1"
                     /translation="MKNFVRTTLLAATLAGVSFGAFATAVPNPPLPAQDPIVQHLKLT
                     NDQITRIKKLHQQLETDVSQISMKGIKDGALIEVIKSGKWDDAAVKQQLAAFSNIEQQ
                     ARYYRVKYYFDLSKVLTPEQRQQVQQDLAQALE"
     gene            16951..17670
                     /gene="pagN"
                     /locus_tag="MOX77_001069"
     CDS             16951..17670
                     /gene="pagN"
                     /locus_tag="MOX77_001069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin/invasin protein PagN"
                     /protein_id="HCA3356679.1"
                     /translation="MKNFFAVCIIPLVVTWSATASAKEGIYITGKAGTSVVNVYGINS
                     TFSQEEIVNGHATLPDRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQ
                     DIIAFGQPVHINVKNQVRMTTYIVNGYYDFHNSTAFTPYISAGVGLAHVKLSNNTIPV
                     GFGINETLSASKNNFAWGAGIGAKYAVTDNIMIDASYKYINAGKVSISKNHYAGDEHT
                     AYDADTKAASNDFMLGITYAF"
     gene            complement(17674..17862)
                     /locus_tag="MOX77_001070"
                     /pseudo
     CDS             complement(17674..17862)
                     /locus_tag="MOX77_001070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459303.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            17898..18031
                     /locus_tag="MOX77_001071"
                     /pseudo
     CDS             17898..18031
                     /locus_tag="MOX77_001071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001458895.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing N-terminus and C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(18633..19250)
                     /locus_tag="MOX77_001072"
     CDS             complement(18633..19250)
                     /locus_tag="MOX77_001072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001539141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TioA protein"
                     /protein_id="HCA3356680.1"
                     /translation="MVKYHPVHVTKNRIKTDDVTDIYFVEPFWKKGENHIIESLMFFE
                     ELQKSFNLFNHKYGLNKYILRIPWEFVLIHMERISKLNSVGLFAVSVDFNNNHKFLSE
                     YIRSRRDYGMEVWFDFCGKHSYSSEIKNLGFFFQACVVPRDPNFISSVYHYHKFQKIL
                     VGDINDVEQRAVYQNEVDYMYGMQWPSSYDGFFFRDHKKNETWCI"
     gene            complement(19390..19845)
                     /locus_tag="MOX77_001073"
     CDS             complement(19390..19845)
                     /locus_tag="MOX77_001073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000141548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HCA3356681.1"
                     /translation="MTVYLDDKDKELLKEIQKDCAQTLWQLAYKVGLTPTPCFKRLKK
                     LKDRGVIIGQFALLDKEKLGLSLNVFIMINISEEQYASISEKIKSMPEVIAFYRISGS
                     FNYLMHTVFTDMNDYYSFYEKIILTNSSISGSASSFVLEQIKETNELPV"
     gene            complement(19978..21057)
                     /gene="tcfD"
                     /locus_tag="MOX77_001074"
     CDS             complement(19978..21057)
                     /gene="tcfD"
                     /locus_tag="MOX77_001074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000066477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein TcfD"
                     /protein_id="HCA3356682.1"
                     /translation="MSNKMKWTSMTAHWSAIINFIRKYVYPARIIAILLMAGATLPQV
                     ADAITVDLNYDKNNVAVITPVWSQEWSVANVLGGWVCRSNRNENEGACEETHLVWWYA
                     FGAYSKIRLRFREQISHAEITLILLGSVRDACYTGVINMNAAACQWGRSLKLRIPSEE
                     LAKIPTSGTWKATLVLDYLQWGGDDPLGTSTTDITLNVTDHFAENAAIYFPQFGTATP
                     RVDLNLHRMNASQMSGRANLDMCLYDGGVKARSLQMKIEGSNKSGTGFQVIKSDSADT
                     IDYAVSMNYGGRSIPVTRGVEFSLDNVDKAATRPVVLPGQRQAVRCVPVPLTLTTQPF
                     NIREKRSGEYQGTLTVTMLMGTQTP"
     gene            complement(21080..23767)
                     /gene="tcfC"
                     /locus_tag="MOX77_001075"
     CDS             complement(21080..23767)
                     /gene="tcfC"
                     /locus_tag="MOX77_001075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000092509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial outer membrane usher protein TcfC"
                     /protein_id="HCA3356683.1"
                     /translation="MSRYFWMYYLLGLCSFTSQATLIPPPGFESLLEGQTEQIEVLLP
                     GHSLGLFPVVVKPDTVQFMSPLMVLESSGLAALPAAERQKALAALSRPLLRNSNLVCG
                     VSEAKDSSECGYVATDKEDVAVIFDENNAQLSLFLNRDWLPDEERRDKRWLTPTPEGV
                     SAFIHRQTLYLSDDLHSRNMTLNGSGALGLGDGRYLGGDWAAIWNQSEHYNNSQAWFD
                     NLFVRQDLGNQYYLQAGRMDQRNLSSATGGDFGFSLLPLSRFDGLRTGTTQAYVNHEV
                     DHNATPVMVQVTRNARIDIYRGSELLGSQFLTPGMHTLDTHSLPPGSYPLALRVYEDG
                     ILRRTETQPFSKGGNSFSAQTQWFIQGGLEDTGDKASHYDGETVMAAGFQTGLRKNIS
                     LTEGISLAHEAWYSETRLNSQHAVLDGTLDLSAGILHGTDSTSGNTEQVTYNDGFSAS
                     LWRNHTESDACSGRHPQSVHASMTCQTSMNASLSVSVGNWYALLGYSTSRTEGRPVYR
                     GYDDNSDKENVFWRQAYIPASHRESAQASATYSLNMAGMNINTHGGVWRTRNDGMNDD
                     GLFMSVSVSYASQPPTMTGSNRYTSAGTDIHSSRNQKTQTSWNVNHVRSWQQDLYREL
                     SVGFSGYNDDSWSGSLGGRMSGRMGELSATISNSHQRNAGSASSLTAGYSSSLALSRN
                     GLFWGGGQDGEPASGMAVNVESEGDEGSSGKVVSVRGSSQPFSLGFGQQSLLLMEGYN
                     ATEVTIEDAGVSSQGMAGVKAGGGSRCYFLTPGHLLVHNISASMSRLYVGRVLDKDGR
                     PLLDAQPLNYPFLSLGPSGRFSLQSEHKESSLWLLSKNRILRCPMSVHKRRDVMQVVG
                     DVRCELSDVDALPQALQISPRVIRLLNVAGLLRHSVQEA"
     gene            complement(23876..24451)
                     /gene="tcfB"
                     /locus_tag="MOX77_001076"
     CDS             complement(23876..24451)
                     /gene="tcfB"
                     /locus_tag="MOX77_001076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001056553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein TcfB"
                     /protein_id="HCA3356684.1"
                     /translation="MYTECTYITVINNKARLFFMNMKTSFIAAAVALATVYSFSVSAV
                     QKDITVTANIDSTLELLQADGSSLPSTMKLDFMPGKGLVHKSLQTRLYSNDQTKSVNV
                     KLLNAPQLINVLDPTKTIDMEVTLGGRSLTTTNSVLEAKTLFPDGKTGDASALLNLDI
                     GQKAGAALQNLPAGEYSGLVSLVISQAVTAG"
     gene            complement(24502..25212)
                     /gene="tcfA"
                     /locus_tag="MOX77_001077"
     CDS             complement(24502..25212)
                     /gene="tcfA"
                     /locus_tag="MOX77_001077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001539136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial chaperone TcfA"
                     /protein_id="HCA3356685.1"
                     /translation="MNFKDTLPGVFLCVAMFACGHARANMLVYPMAAEINSSREEATS
                     LFVYSKSDHVQYIRTRIMRIEHPGMPQEKEVPAGNDIETGLVVSPEKFALSPGTKKTI
                     RVISTQAPEREEAWRVYFEAVPELEDDPQAGGKQNSSVSVNLVWGVLLRVSPSDPRPA
                     LVTDGHHLLNTGNTRLSLIRAGNCDTTCHWQNIGKSIYPGGSADIPAGIKSNAFRVEY
                     RTGANSPVISADLTAAGK"
     gene            26118..26804
                     /gene="istB"
                     /locus_tag="MOX77_001078"
                     /pseudo
     CDS             26118..26804
                     /gene="istB"
                     /locus_tag="MOX77_001078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000544830.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing N-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS21-like element helper ATPase IstB"
     gene            complement(26869..27030)
                     /locus_tag="MOX77_001079"
                     /pseudo
     CDS             complement(26869..27030)
                     /locus_tag="MOX77_001079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013365374.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(27117..27230)
                     /locus_tag="MOX77_001080"
     CDS             complement(27117..27230)
                     /locus_tag="MOX77_001080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010989119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytoplasmic protein"
                     /protein_id="HCA3356686.1"
                     /translation="MMPTDGNDNTRKQDGAVFGQPEVKPMPETLQCTEKWR"
     gene            complement(27350..28296)
                     /locus_tag="MOX77_001081"
                     /pseudo
     CDS             complement(27350..28296)
                     /locus_tag="MOX77_001081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459302.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
     gene            complement(28788..29028)
                     /locus_tag="MOX77_001082"
                     /pseudo
     CDS             complement(28788..29028)
                     /locus_tag="MOX77_001082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309415.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PerC family transcriptional regulator"
     gene            complement(29111..29932)
                     /locus_tag="MOX77_001083"
     CDS             complement(29111..29932)
                     /locus_tag="MOX77_001083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HCA3356687.1"
                     /translation="MSYARHLPVLMYHHVSDKPGQITLSPRTFRAQMKWLAESGWKTV
                     TAAAVEAFYHGARLPRKSVMLTFDGGWLDNWLQVFPVLQEFNLHAHLFLVTSLISDGP
                     VRIPAGEPVYSHDECQMLVKQGRVDEVMLRWSEVREMHLSGLVEFHSHTHTHRRWDQK
                     PVSRNPSDLLRVDILLSRKRMREMLGYCSQHLCWPEGWYCSDYIHVAEELGFTYLYTT
                     ERRMNNPVIGSQRIGRINTKERKNVGWLKRRLFYHTTPGFSSLLARHKGARRIAD"
     gene            complement(30340..30810)
                     /locus_tag="MOX77_001084"
     CDS             complement(30340..30810)
                     /locus_tag="MOX77_001084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilin structural protein SafD"
                     /protein_id="HCA3356688.1"
                     /translation="MWMKIQRVKTVIYSVSLLVAASSLVPIANAAEKLQTTLRVGTYF
                     RAGHVPDGMVLAQGWVTYHGSHSGFRVWSDEQKAGNTPTVLLLSGQQDPRHHIQVRLE
                     GEGWQPDTVSGRGAILRTAADNASFSVVVDGNQEVPADTWTLDFKACALAQEDT"
     gene            complement(30832..33342)
                     /locus_tag="MOX77_001085"
     CDS             complement(30832..33342)
                     /locus_tag="MOX77_001085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial biogenesis outer membrane usher
                     protein"
                     /protein_id="HCA3356689.1"
                     /translation="MKFKQPALLLFIAGVVHCANAHTYTFDASMLGDAAKGVDMSLFN
                     QGVQQPGTYRVDVMVNGKRVDTRDVVFKLEKDGQGTPFLASCLTVSQLSRYGVKTEDY
                     PQLWKAAKTPDECADLTAIPQAKAVLDINNQQLQLSIPQLALRPEFKGIAPEDLWDDG
                     IPAFLMNYSARTTQTDYKMDMVGRDNSSWVQLQPGINIGAWRVRNATSWQRSSQLSGK
                     WQAAYTYAERGLYSLKSRLTLGQKTSQGEIFDSVPFTGVMLASDDNMVPYSERQFAPV
                     VRGIARTQARVEVKQNGYTIYNTTVAPGPFALRDLSVTDSSGDLHVTVWEADGSTQMF
                     VVPYQTPAIALHQGYLKYSLLAGRYRSSDSATDKAQIAQATLMYGLPWNLTAYGGIQS
                     ATHYQAASLGLGGSLGRWGSLSVDGSDTHSQRQGEAVQQGASWRLRYSNQLTATGTNL
                     FLTRWQYASQGYNTLSDVLDSYRHNGNRLWSWRENLQPSSRTTLMLSQSWGRHLGNLS
                     LIGSRTDWRNRPGHDDSYGLSWGTSIGGGSLSLNWNQNRTLWRNGGHRKENITSLWFS
                     MPLSRWTGNNVSASWQMTSPSHGGQTQQVGVNGEAFSQQLDWEVRQSYRADAPPGGGN
                     NSALHLAWNGAYGLLGGDYSYSRAMRQMGVNIAGGIVIHHHGVTLGQPLQGSVALVEA
                     PGASGVPVGPWPGVKTDFRGDTTVGNLSVYQENTVSLDPSQLPDDAEVTQTDVRVVPT
                     EGAVVEAKFHTRIGARALMTLKREDGSAIPFGAQVIVNGQDGSADLVDTDSQVYLTGL
                     ADKGELTVKWGAQQCRVNYHLPAHKGIAGLYQMSGLCR"
     gene            complement(33366..34106)
                     /gene="papD"
                     /locus_tag="MOX77_001086"
     CDS             complement(33366..34106)
                     /gene="papD"
                     /locus_tag="MOX77_001086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017465813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pili assembly chaperone PapD"
                     /protein_id="HCA3356690.1"
                     /translation="MKIISFGVMAAVLFVSNSITPPVYAAEQKLSLNTKSFSVKLGAT
                     RVIYHAGTVGATLSVSNPQNYPILVQSSVKAADKSSPAPFLVMPPLFRLEANQQSQLR
                     IVRTGGDMPTDRETLQWVCVKAVPPENEPSDTQAKGATLDLNLSINVCDKLIFRPDAV
                     KGTPEDVAGNLRWVEAGNKLKVENPTPFYMNLASVTVGGKPITGLEYIPPFADKTLNM
                     PGSAHGDVEWRVITDFGGESHPFHYVLK"
     gene            complement(34181..34679)
                     /locus_tag="MOX77_001087"
                     /pseudo
     CDS             complement(34181..34679)
                     /locus_tag="MOX77_001087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000789648.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Saf-pilin pilus formation protein SafA"
     gene            complement(34812..35306)
                     /locus_tag="MOX77_001088"
     CDS             complement(34812..35306)
                     /locus_tag="MOX77_001088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000789624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HCA3356691.1"
                     /translation="MKNIKKLIIASVLSMITASCYAGSIVVGSEQQSSVDIGFASPQQ
                     LSVTFAPVAGLKAGVIKSNTEIATIAVSSVAAKQFAIAADFKAKNVMNGDTWTLYGKN
                     TGKGIKVYFYGETTSPKGNVNYNGHQWIIYDINDKLGVKLAGDQNVPADVFPMTVNIA
                     AYQA"
     gene            complement(36062..36766)
                     /locus_tag="MOX77_001089"
                     /pseudo
     CDS             complement(36062..36766)
                     /locus_tag="MOX77_001089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611456.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS481 family transposase"
     gene            36819..37124
                     /locus_tag="MOX77_001090"
     CDS             36819..37124
                     /locus_tag="MOX77_001090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001555868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system SymE family toxin"
                     /protein_id="HCA3356692.1"
                     /translation="MARLCGILTYSRVERLSVRLYGEWMPQAGFINGMPVKVRVMRDC
                     IVITPQHTRGLFVCIEGMGVTFINQKKVKAWLKTFPGALNDTGDIPVIKRSRLEGGI"
     gene            complement(37194..37637)
                     /locus_tag="MOX77_001091"
     CDS             complement(37194..37637)
                     /locus_tag="MOX77_001091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000437847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HCA3356693.1"
                     /translation="MEQRAFLIEIKKLIASITSKNMTVKGCSTEDILYLEENYGELPK
                     SYKLFLSLLGVESGDFKEGTDLLFKDINDINKYTVELMQENNISIPDGMYSFLLHQGY
                     SALFFIERDDDPSVYCYTEGKEIKKTKYVFSEYVLAEIELYNRYQ"
     gene            complement(37639..37959)
                     /locus_tag="MOX77_001092"
     CDS             complement(37639..37959)
                     /locus_tag="MOX77_001092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010989117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356694.1"
                     /translation="MATSNYNINGQTGTADALSGMNTNNSPFLHTPADGSRKFTTFEV
                     GHDRAFDSEVKIFEHIANKFPTTAKGRIDLYSELKVCPSCSEVITQFKAMYPNIEVNV
                     TWGG"
     gene            complement(38044..38374)
                     /locus_tag="MOX77_001093"
                     /pseudo
     CDS             complement(38044..38374)
                     /locus_tag="MOX77_001093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000133169.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="RHS domain-containing protein"
BASE COUNT        10023 a         9971 c         8676 g         9704 t
ORIGIN      
        1 gcgcacatcg tcagcaatcg ctttcagacg cgcaggggtc agcgccaggc ggtccagcat
       61 cgcttcgctc aggccattgg ctcgcgcctg ctcaacatct tgtacgttcg cgctgaggat
      121 actttccatt tgcgcttcca gttcatcggc tattttttcc agcacgcgat ttttttcgca
      181 gctggagagc agcgccagct tatacgacgc cgctttagca gcaatgccca tttgttccag
      241 catatgcctg ttccttatcg agtaatcatg tcatcacgat gaacagcgac cgggccatat
      301 tcatagccca gaatcgcatc gatttgttga gagtggtgac cggctatccg ccgcagagca
      361 tcactgttat aacggctgac gccatgagcg atatcacgcc cttgcaggtt acaaattctg
      421 atgacctccc cccgcgaaaa attgcccgtc acgcttttga tgccttttgg cagaagtgaa
      481 ctgccacgtt ccagcattgc cgcggtcgcg ccttcatcaa ccgtaatttc gcctgccggc
      541 ggcgcgccga agatccaacg tttgcggttc tccagcggcg aggcttgcgc atgaaaacgg
      601 gtgccgacgg aaatcccctc catcacatcg ccgatcacgc ccggtttact gcctgaggca
      661 ataatcgtat caatacccgc gcgacaggcc acgtctgccg cctgaagctt agtgctcata
      721 ccaccggttc ccagcccgga aacgctgtct cccgcgatag agcgcagcgc atcgtcaacg
      781 ccatacacat ctttgataag ctccgcctgc ggattgctac gcggatcggc ggtaaataat
      841 ccttgctgat cggtcagcag cagcagttta tccgcgcctg ccaggatcgc cgccagcgcg
      901 gagaggttat cgttgtcgcc cactttaatt tccgctgtcg caacggcatc attttcattg
      961 ataaccggca caatatggtt atccagtaac gcacgcagcg tatcgcgggc gttcagaaag
     1021 cgctctctgt cttccatatc cgcacgcgtc aacagcatct gcccgatatg gataccgtaa
     1081 attgaaaaca actgctccca cagttgaatc agacggcttt gccctaccgc cgccagaagc
     1141 tgtttagagg caattgttgc cggcagttcc gggtagccga gatgttcacg tccggcggca
     1201 atcgcgccag aggtaacgat aacaatacga tgtcccgcgg cgtgtagctg cgcgcactgg
     1261 cggacaagtt ctacgatatg ggcacggttc aggcggcgcg atccgcctgt tagcacgctg
     1321 gtgccgagtt ttacgaccag cgtctggctg tcactcatga ttctctgccg ttcaaaataa
     1381 gaaataaaga ccaaatgaac gttttagcag gactggctcc ggttgccaac aacctgtacg
     1441 cgtagcgtga aattttgttg cgcaggatca gcaagcgtag cggcggaatt tgaccatttt
     1501 attaccgcaa caattaaata tattttttta aaaaaactct cactttgtca taaatctttc
     1561 attaccgaac gttaaaaacc ttcctgtttt ttaccgggtc tcccgacaaa tcatagcgcg
     1621 taattaaaac aggaatggaa atgaataaga gcactctggc aatagtggtg agtatcatcg
     1681 catcagcatc tgttcacgcc gccgaggttt acaataaaaa cggtaataag cttgatgtgt
     1741 atggaaaagt taaagccatg cactatatga gcgattatga cagcaaagat ggcgatcaaa
     1801 gctacgttcg ttttggtttt aaaggcgaaa cgcaaattaa cgatcaattg accggctacg
     1861 ggcgctggga agctgagttt gccggtaata aagccgaaag tgattcgtcc cagcaaaaaa
     1921 cccgcctggc ctttgctggt ctgaaattaa aagatatcgg ttcttttgac tatggacgta
     1981 acctgggcgc gctgtacgat gttgaggcct ggacggatat gtttcccgaa ttcggcggcg
     2041 actcttccgc ccagaccgat aattttatga ctaaacgcgc cagcgggctg gcgacttacc
     2101 gcaataccga tttcttcggc atcgttgatg gactggatct taccttacag tatcagggga
     2161 aaaacgaaga tcgcgatgtg aaaaagcaaa acggcgacgg cttcggcact tccgtgagct
     2221 atgatttcgg cggcagtgat tttgccgtca gcggcgctta tactctctcc gatcgcacca
     2281 gggagcaaaa tctgcagcgc cgcggtacgg gcgataaagc cgaagcctgg gctacgggtg
     2341 ttaagtatga cgcgaatgat atttatattg cgactttcta ttcagaaacc cgcaacatga
     2401 cgccagtttc cggcggattt gccaataaaa ctcaaaactt cgaagcggtt atccagtatc
     2461 agtttgactt tggtctgcgt ccgtcattag gctatgtgct gtcaaaaggc aaagatattg
     2521 agggcgtcgg cagtgaggat ttggtgaatt acattgacgt tggcgcaatc tattatttca
     2581 acaaaaatat gtccgcgttt gtagattaca aaatcaatca gcttgatagc gataacacgt
     2641 taggcattaa tgacgatgat attgtggcaa tagggttgac ctaccagttc tgataagtcg
     2701 cattgtgcct gatggcgcta cgccatcagg catggcagca gggttatgcc gacagtttta
     2761 ccggctcgtc gttgaaatcg tcagacggct ccagcgccag ctccatagaa atcagcaggt
     2821 cgcgtagctt ttcatgaaac tcgcgtagcg tgtattccag tcgctccacc acttcggttt
     2881 cgttaatcgg cactacggtc cagttgccct ctttatcaaa caaaccaaac tgataacgat
     2941 aagtgaagcg tttctcttgt gcttccagct ccatccacca gccccaaaat tcacgcttct
     3001 ctggcgcggg cttcacgttg acgcaaactg ccaggcaatc gaaaaaaaaa cgattgtctt
     3061 cgcactgccc ttcccggata taggggccaa gcgcggtaaa tttcttgatc aatctacttt
     3121 tcgggtgtcc actcggtaac gtcattgcga tctcctttaa tgaagcaact gttttaccaa
     3181 atcaatagaa tttatcaatc tattaacaca atctatgatt aatccagtcg gtaatttctt
     3241 gcagcgcgtg gtcaaaattg cggtacaccg ggttaaaagg gatctctatc agcttaccgt
     3301 ctgaagatga tgttgtaatt aagcgagact cttcttccgg gctgaaagga tcgtttttcc
     3361 agaagccgga aagcattggc gtaggacaac gtctgcccag tagcccctgt actttcaacg
     3421 aatagcggtt gagctccaca cgcagcgcct catccgaagc atcatgcata cccagacggc
     3481 tggccagcac atccagatac atctccggca ctgtgctctg tcgttgcgga tcgctaagta
     3541 gcgcatggac caccggcccc aggcaagcca ccgctttcaa acgcggcgct tccagatagg
     3601 ccagacgcac cgcaacgttg gcgccaaaac ggaaaccaaa cgccgcaaca cgggtatgat
     3661 ccacccaggg gacattagga agcgctttta acacatgctg gtggagcaag ctggaatcct
     3721 gggttaattt ccactttgat gaaaatccaa ccgaaggcat atcaagcgtt aacatcgcga
     3781 taccgcgcgg cgcgaaatag cgttcataca gggtgtaata gtcgatttgc atggcgtcca
     3841 ggccgccgca catgagcacc gtcggaaacg gaccatcccc tttcggcata tgtaaaaacg
     3901 cggtgacagg cgaaccgcca ggaacggcaa attccatttc acgtaacgag cctggcaacc
     3961 gctgcgcggc ctcttcatag gcgcgattcg ccagcgcctg cgcctgctcc gccagctcat
     4021 cgcccttcaa atgcgggtag gcggcaatgt tatagagcgt tgaggcatga agccagtagc
     4081 gtccgctgcg catggcgtcc tgttcctgac aggctttctg ctgccagtcc atcgcctgct
     4141 ttgcccactc ataaatccag ttgccgccgc ggtaaccgat gaccgtatcg tataaatcat
     4201 catccgttcg ctctgcgtcg ctcatcacaa tgcgcgcctg cacatcaagg atttctcgtg
     4261 ggtcaacgcc gcgccaaatc cacatcaggc ggtttatcat gcgataccaa tgcgggacgt
     4321 tcttaccgtc cagcgcggat tgcatgggcg gctgcgaccc acgattgaac cgacggacaa
     4381 gggtagacgt ttcagtatgt ttaaagcggg gtttgaacag ggtttcgctg aggttagcct
     4441 gtgtcattcg tgcagcctcc ttggatactc atagaggctt attgtaacca ataaaacagc
     4501 gcccggcatt gccgggcgct ctgaaaagct gctgattaac gacctgaaat cggcggtaca
     4561 aataccacac ccatatccca gggctgctca atccaggtgt tctgaggaat atcaataaca
     4621 taatcatcaa ccagcggacg gcccgccggt ttagcgaaaa tcgtgacgaa atgcgcttta
     4681 gggtacattt cgcgaatcgc gacggcggtg ccgccggtat cgaccagatc gtcgatgacg
     4741 ataaagcctt cgccatcgcc ttctgcacgt ttcagcactt tcagttcgcg ctggttatcg
     4801 tgatcgtagc tggagatgca tacggtatcg acatgacgaa tgcccaattc acgcgccagt
     4861 agtgcgcccg gtacaaggcc gccacgactt acggcaataa tgcctttcca ttgttctgaa
     4921 ggcatgaggc ggctcgccag tttgcgtgcg tgaatctgca acatgtccca ggtgacgacg
     4981 tatttttcgc tcatgtgaag tgtcccagcc tgtttatcta cggcttaaaa agtgttcgag
     5041 ggggaaatag ttgcgcgaga ttatagagac ctgacgcgct aaaaaccagt gtttagcgga
     5101 atccacgcct ctttttgtat gctttatact acccgcaggc ggagaaagtg gtattctcag
     5161 tcgcatctcg taagagttat taattccgct aaccctgtgg cctgtaagaa cgtttttcag
     5221 accaccgcca aggagactta tcgtgtctga actgtctcag ttatcaccac aacctttgtg
     5281 ggatattttt gccaaaatct gttctattcc tcacccgtcc tatcacgaag agcaactcgc
     5341 ggaacatatt gtgagttggg ccaaagagaa aggcctttac gtggatcgcg accaggtcgg
     5401 taatattctg atccgtaagc ccgccactgc aggtatggaa aatcgcaagc cggtcgtttt
     5461 acaggcgcat ctggatatgg tgccgcaaaa aaatagcgac accgttcacg acttcactac
     5521 agatcccatc cggccttata ttgatggcga atgggttaaa gcgcgcggta ctacgctcgg
     5581 cgccgacaat ggtattggaa tggcttctgc gttagcggta ctggctgacg ataatgtcgt
     5641 ccatggcccg ctggaagtgc tgctgaccat gaccgaagaa gcgggcatgg atggcgcgtt
     5701 cggcctccag tccggctggt tgcaggctga catcctgatc aacaccgact ctgaagaaga
     5761 aggtgagatc tatatgggct gcgcaggcgg catcgatttt acctctaatc tgccgttgac
     5821 ccgtgaagct gtacccgcag gatttgcatg ctttaagcta accctgaaag gtctgaaagg
     5881 cggccactcc ggtggtgaaa ttcacctcgg ccttggcaat gccaacaaat tgctggcgcg
     5941 ttttctggcc gggcacgcag aagaactgga tctgcgtctg atcgatttca acggcggcac
     6001 gctgcgtaac gcgattccgc gcgaagcgtt cgctaccctc gccgttgcca cagacaacgt
     6061 aggcgctctg aaaacattag tgaacgctta ccaggatatt ctgaaaaacg aactggcgga
     6121 aaaagagaaa aacctgacgc tgcaactcaa tgaggttgcc agtgataaag ccgcattgac
     6181 cgcgccgtca cgcgatacct ttgtgcgcct gctgaacgca acgccgaacg gcgtgatccg
     6241 caattcagac gtggcgaaag gcgtagtgga aacatcgctg aacgttggcg tggtcacaat
     6301 gtctgatgcg aatgtcgaaa ttcactgcct gattcgctct cttatcgaca gcggtaaaga
     6361 ttatgtggtg agtatgctgg attcgctggg caagctggct ggcgcgaaaa ccgaagcaaa
     6421 aggcagctat ccgggctggc agcccgatgc gaactcgccg gtcatgcacc tggtgcggga
     6481 aacctatcag cgtctgttca acaagacacc gaacatccag attatccacg ccggcctgga
     6541 atgcggtctg tttaagaaac cctatccgga tatggacatg gtttctattg ggcctaccat
     6601 taccggacct cactctccgg atgagcaggt acatatcgaa agcgtgggcc actactggac
     6661 tctgctgacc gaattgctga aagcgattcc tgcgaagtaa gaaagcgcta aaatgcccgt
     6721 ctcatttctg gacgggctat caatatggaa tatcgggtat ccattgccag ataagctctc
     6781 ctggatgcgc tgaatagcgc tgcggctaca cgcgaatagc cagacagccc tataacagcg
     6841 ctggtagcac cgaattattg tggcgtaaac gccattcctt taaatatccg tagcggattg
     6901 ccgcgctcaa tctgatgatg gaacagacgc ctttcagact tcaacgccgc acactcattt
     6961 tgccgttgct gttccagccg ccaggcaatc agcagccggg ccagacgctt attcgcatgt
     7021 tgactgcgct ccgactgaac cttcacgcta atcccgctcg ccaggtgcgt ggcccgcact
     7081 gccgagtcgg ttttattaac gtgctgccca cccgggccgg aagagcgcag agtctcgaaa
     7141 cgaatctcat cagactgtat gtgctcgtcg gcggaaaagc gcccaatgcc gacgtaccag
     7201 ttttttcgcc catggtgcgg gcgatacggg ctggtacaaa tccacagtaa cgtgccgcac
     7261 caacgttcac tgaaagccat ggctttttcg ccgtccagcg agaccagcgc agaacgcagc
     7321 gtgtctggta atcgtcccgg ctctgtttca agccgtgtca gcgatacctt ttctctggcg
     7381 gcttctttcg tcagacaatc cagcgctttt tttaccgcca gacaacactc gtccggtccc
     7441 tgcgcagaag aaagttgcag taagatcatg cgcttttctc ccctgaggtt ttcagcgtca
     7501 gcaccggacg caggcaggca actggcgtaa tcagtccggc gtctgccaga caatccacaa
     7561 cgctatcgat ggatttatac gcctgcggcg cttcttcata aatgagctgg cgatcgcggc
     7621 aaatcacccg gctacccatc ccagtacggc agagctgtcg cggggtaaat tttgccgata
     7681 accggtcttt acactcggta cgcatccatt tgcgccccgc gccgtgcgcc agggagaaga
     7741 ggctctcctc gctgacgacg ggtttcacca gccagctata atcgccgcgc gagccgggga
     7801 taatcaccag tccctgccca tctggcgtag cgcctttacg gtgcagccac cccgcctcac
     7861 ccgcgacagt acagggttca acgaagttat gcgccacatc cagccgcggt tcgccctcag
     7921 ccctgagctg ttgcagtatc cggcgggcaa tcagcgcgcg attactgcgg gcaaatgcca
     7981 gcgcatcgtc atgttctgca aggtagtggc gcgcatcgtc gctatcttcc ggcaaaccgt
     8041 tatgcgaaaa cgcctccaca tgacgacgca ggatagcttg ccccagaccg cgtgaaccac
     8101 tgtgtaccag cagtaataac tgcgcttttt gcaaccccga caaagcgaac gaatcagcat
     8161 cgacgatgcg atcgacctgc tgcagctcgg caaaatgatt gccgccgcca atggaaccca
     8221 gcgcagagcg ccacgaatga tgctgcatta cggcggggac attctcctcc agccactgcg
     8281 cgtccgccac gtcaggcagc gacgccagcc gcttctccag tttatcggcg ttatatttac
     8341 gccctaaaat atccgtttgc cataacgcca tgccgcagcc gatatcgttg ccgaccagcg
     8401 ccggataaaa acgtccacgc gagaaaaagg ctgcgccaat aggatagccg cgccccggat
     8461 gcagatctgg catcccgata acgcgtttca taccggttaa cttagccgtc gtatataatt
     8521 gttggatcgc ggaatcttcg atccacaggt tatccgatgc gatagaaaat accacatctg
     8581 ataaaggacg aatataattg cccatatacc attccatata tgaattaaaa aatcaggaaa
     8641 tggcagacta atccagggca ataaaagaaa attaatcctg gaaaggtctg caaagtgcgt
     8701 tcagagaata aagtgtcatg atgaacctcc tttgcagtta ttgagaatga gaaaacgcgg
     8761 gtatagtaat actgaaattt agatggcgca atcgtaatag tgataaaatc ttaatagcct
     8821 gacttataac cctaacacca actgtcgttc caactgaggg tcgagcagcg ttacgtgtag
     8881 ccccaccaac cgtacgccgc gctcgccgcg acgctcgtcc caggttttac gggcggtggt
     8941 aattaagtct tctttattta attgcggcca gacatgttcc tgagtggttt gctgaaaatc
     9001 attaaatttt aatttaacgc cctgtcgggc aatcagtaaa tcgggcttta ctatagccag
     9061 acgacgctcc agttccggat ataaatgttc aataatggcc tcgcagtccg accattcatg
     9121 aatatcctcc gccagagtac gctcaacgcc taccgattta cgcagccttt cgctgttaac
     9181 atcacgctcg tcaataccct gactacgctc ccataatacc cggccaaatt taccaaagcg
     9241 tttgagaagc atcgccagat cgcactgttg aatatccccg caggttctta accccatatt
     9301 ttccagtttg gcggcggaaa ctttccccac gcctggaatt ttggctaacg gcaacgtttt
     9361 aagaaagtcg ggtacatcgg ctggcgtaat aacatattgt ccgttcggtt tattgagatc
     9421 ggaggcgatc ttcgccagaa atttcactgg cgcaacgccg gcggaggcgg tgagttgcag
     9481 ttcattgaaa atagtctgac gaatctccct ggcgatcaga gttgccgaac cataacagtg
     9541 cgggctgtca gtcacatcca gccaggcttc atccagcgag agcggttcaa tcagtgaagt
     9601 gtagcgggaa aagatgtcac gtacatgccg cgaagcctct ttataggcgt caaagcggcc
     9661 aggcagtaag gtgagatggg ggcacagctt tagcgccatg gcagtcggca tcgcgctgcg
     9721 tacgccaaac tggcgcgcag gatagttggc ggtactgata acgcctcttc gctcacgact
     9781 cccgccaatg gcaatgggga tatcgcgtaa cgccggatta tcacgcatct ctaccgcggc
     9841 aaaaaaacag tccatatcaa catgtatgat tttgcgcatc gctcgccccc acaatactgt
     9901 ttaagtgtac agtatgtttt attgcgcgca aagagacatt cgcgttaaaa atgcgacata
     9961 ttcgaaggta tgacgacgaa agcggcggga aaattgtaaa cgtacacacg gggacttgcg
    10021 aaaaactgcc gtggtgctaa tgtgagcgct ccaaatccag attactccga tttggggact
    10081 cttttgccgt tctggcgtgt gtaaccgttt tatcaaggaa caagcagtat gcgtaaaatc
    10141 gcattttttc ttgcgatgct tctgatgccg tgcgtctcat ttgccggttt gctgagcagc
    10201 agcagccccg tcacgccggt cagtaaagag tataagcagc agttaatggg ctcaccggtc
    10261 tatattcaaa tttttaaaga agagcgcacc cttgatctct acgtcaaaat gggtgagcaa
    10321 taccagttgc ttgatagcta caaaatttgc aactattccg gcgggttagg cccgaaacgc
    10381 cgtcagggcg attttaaaag tccggaaggg ttttacagcg ttcagcgtaa tcaactcaag
    10441 ccagacagcc gtttttataa ggccatcaac attggttttc ccaatgccta cgatcgcgcg
    10501 catggctatg atggtaaata tctgatgatt cacggtgcct gtgtttccgt cggctgctat
    10561 gccatgaccg acagcggcat tgatgagatt ttccagtttg tcaccgccgc gctggtcttt
    10621 ggtcagccaa gcgtacaggt gagtatttat ccgttccgga tgaccgacgc caatatgcag
    10681 cgtcataaat attcatatta caaagatttc tgggcgcagc taaaacccgg ctacgattat
    10741 tttgaacaga cgcataagcc gccaactgtt tctatcgttg atggacgtta cgtcgtgagc
    10801 aaaccgttga gtcacgaagt cgttcagcca cagctggcct caaattatac gctctccgag
    10861 gcaaaataac gcccattcgc ctggcataat cttttgccag gtttcattcc ccgttagcgg
    10921 ctgggtagca atcacggtaa ccacgtcatt tggcgtggtc tgtgaactga aatcaatttc
    10981 catatcctga tccaccagcg tggctacgcc aaacggcgcc cggcgagtga tccagtgcaa
    11041 atgggttgag caaaacgcca tcacatatcg cccatctgac agcagcatgt taaaaacgcc
    11101 tttttcacgt aataccgtcg ccagtgtcgc aatatattta aataccgctg tcatgttgcc
    11161 cggcgtgcgg ggataacgct gcgttaattt atgcaatagc cagcaaaacg ctttttcgct
    11221 gtcggtttcc cccaccggac gaaaattacc ggtttccagc gacttataac cgttgagctg
    11281 accgttatga gcataagtcc agttgcgtcc ccataattcc cgggtaaaag ggtgtgtatt
    11341 ttccagcgct acttcaccgc gattagcctg acggatatga gcgataaccg agcaggactt
    11401 gatcgggtaa ttctgtacca gtttcgcaat cggcgaatgg tagctcggtt gcggatcttt
    11461 aaacgtgcga cagccctttc cttcgtaaaa ggtaattccc cagccgtctt tatgcggccc
    11521 ggttccgccg ccacgctgca ccagtccggt gaagctaaag cagatatcca tcggcacatt
    11581 ggcgctcatc ccaagcagtt cgcacataca tcacctacct taaaacggtt aattgcctga
    11641 taagaccagc aaagcacagc tcgtaggccg gataagacgc ttgcgtcgcc atccggcaca
    11701 atgcccgatg gcgcttcgct tatcgggcct actcgttcca ggcccgataa gaccggcaaa
    11761 aattatcggc ttatttaacc atctcttttt cgatcaactg aatcaggata tgaatcactt
    11821 tgatatgaat ttcctgaata cgatcggcat aaccgaagtg cggtacgcga atttcaatat
    11881 ccgccgttcc cgccattttg ccgccgtctt tgccggtcaa cgtaatcact ttcatgcctt
    11941 tttcacgggc cgcggcaatc gctttaatca cgttaccaga gttacccgac gtcgagatcc
    12001 ctaacaggac atcgccttcg cgccctaccg cctcaacgta acgagagaaa atatagtcat
    12061 agccaaaatc attactgacg caggatatat ggctaacatc agaaatcgca attgccgggt
    12121 agcccggacg attttcacga taacgacctg tcagctcttc agcaaagtgc atcgcatcgc
    12181 aatgggagcc gccgttaccg caggaaagta ccttaccacc cgctttaaaa ctgtcagcca
    12241 acaggaccgc cgcgcgctga atggcgtgaa tattggcgtc atcttttaaa aaattagcca
    12301 gcgtttccgc cgcttcgttc agttcgttac gaataagatc ctggtacatg aggatatcct
    12361 tcagcatgaa tgtaaatgac agtatgcagt gtaccggata gcagtacagg cgagaagcat
    12421 aagccgaatt aacgcctcac gcttttgatt tttcgtgccc ccaaaaacgg caacaatgtg
    12481 agctttgttg taattatttt gtaaacacat tgctaaaaga ttttacatcc actacaacct
    12541 aatcatcaca agtggtcaga cctcctacaa gcaagggagc ttttcgttat gatgattttg
    12601 agtattatcg ctacggttgt tctgctcggc gcattgttct atcaccgcgt gagtttattt
    12661 ctcagcagcc tgattctgct cgcctggacc gccgcacttg gcgtcgctgg cctgtggtcc
    12721 atctggctgt tggttcctct ggccattatc ctcgtgccgt ttaacctcac accgatgcga
    12781 aaatcaatga tttccgcacc ggtgttccgc ggcttccgta aggtcatgcc gccgatgtcg
    12841 cgcactgaga aagaagcgat tgatgccggt acaacctggt gggaaggcga tctgttccag
    12901 ggcaagcctg actggaaaaa actgcacaac tatccgcaac cgcaactcac tgccgaagag
    12961 caagcgtttc tcgacggccc ggtagaagaa gcgtgccgga tggcgaacga tttccagatt
    13021 acccatgaac tggcggatct gccgccggaa ctgtgggctt acctgaaaga gcatcgtttt
    13081 tttgcgatga tcattaaaaa agagtacggc gggctggagt tctccgctta tgtgcagtcc
    13141 cgtgtactgc aaaaactgtc cggcgtctcc gggattctgg ctatcaccgt cggcgttcca
    13201 aactcactcg gccctggcga gctgttgcag cactatggta cggaagagca gaagaatcac
    13261 tatctgccgc gactggcgcg cggccaagaa atcccctgct ttgcgctgac cagcccggaa
    13321 gcaggttctg atgcaggcgc tattccggat accggcgtgg tttgcatggg cgaatggcag
    13381 ggccagcagg tgctgggtat gcgtctgacc tggaacaagc gttacattac gctggcgccg
    13441 atagctaccg tgttgggctt ggcgtttaag ctttccgatc cggatagatt gttaggcgga
    13501 gaagaagagc tgggtattac ctgcgccctg atccccacct caacgccggg tgtggaaatt
    13561 ggtcgtcgtc acttcccgct taacgttccg ttccagaatg gcccaacccg cggtaacgat
    13621 attttcgtgc ctattgatta tattatcggc ggccccaaaa tggccggaca gggctggcgt
    13681 atgctggtgg aatgtttgtc ggtaggacgc ggtattaccc tgccgtccaa ctccactggc
    13741 ggggtgaaat ccgtcgcgct ggcaaccggc gcctatgctc acattcgtcg tcagttcaaa
    13801 atttctatcg gcaagatgga aggtattgaa gaaccgctgg cgcgtattgc aggtaacgct
    13861 tatgtgatgg atgccgccgc atcgttaatc acctacggca ttatgctagg cgaaaaaccg
    13921 gcggtactgt cggctatcgt gaagtaccac tgcacccacc gcggccagca gtccattatc
    13981 gacgcgatgg atatcactgg gggtaaaggc attatgctgg gcgagagcaa cttcctggcg
    14041 cgtgcttacc agggcgcgcc tatcgcgatc accgtggaag gcgcgaatat cctgacccgt
    14101 agcatgatga tctttggtca gggcgccatt cgctgccatc cttatgtact ggaagagatg
    14161 gccgcagcgc agaataatga tgtgaatgcc tttgataaac tgttgtttaa acatattggc
    14221 catgtcggca gcaataccgt ccgcagtttc tggcttggcc tgacccgcgg attaacgagc
    14281 catacgccaa ccggcgacgc cacgaagcgt tattaccagc atctgaaccg actgagcgca
    14341 aacctggccc tgctgtccga cgtgtcaatg gcggtactgg gcggcagcct gaaacgccgc
    14401 gagcgtatct ccacgcgtct gggcgatgtg ttgagtcagc tttatctggc ctcagccgta
    14461 ctgaagcgtt acgacgacga aggccgccac gaagccgacc tgccgctggt gcactggggc
    14521 gtacaggatg cgctgtatcg tgctgaacaa gcgatggacg atctgctgca gaacttcccg
    14581 aaccgcgtcg tggccggatt gctcaccgcg atgatcttcc cgactggccg tcattatctg
    14641 gcgccgtctg ataagctgga tcacgccgtg gcgaagatcc tacaggtgcc gaacgccaca
    14701 cgttcacgta ttgggcgcgg tcagtatctg acgcccgccg aacataatcc ggtcggttta
    14761 ctggaagaag cgctgcgtga tgtcatcgct gccgacccta tccaccagcg catctgcaaa
    14821 gaactgggta aaaatctgcc gtttactcgt ctggatgaac tggcgcgcaa tgcgctggcg
    14881 aaagggctta tagataaaga tgaagccgcc atcctggcga aagcggaaga gagccgcctg
    14941 cgcagtatca acgttgatga ttttgaacct gaagcgctgg cgaccaaacc ggtaaagctg
    15001 ccggagaaag tgcgtaaagt cgaagccgca taatcagtct cgtgtctttc ctgccccgct
    15061 ttcgcggggc tttttcttgc cgctttttta ttattgctca tgctacagtg taaagacgct
    15121 gttcaatgag gagctccgat cgtgtctggt ttgaaaatta ctctgttgca acaaccttta
    15181 gtctggatgg acggcctggc aaacctgcgt cattttgaca gacagctaga gctcgtatct
    15241 ggccgggatg tgattgttct gcctgaaatg tttaccaccg gcttcgcgat ggaggccgct
    15301 aataactcac tttcgcaaga tagcgtgatt acgtggatgc aggccaaagc ccgacaaact
    15361 gacgctctga ttgccggcag cgcggcgcta caaactgagc gcggcgccgt aaatcgcttc
    15421 ttactggttg aaccggaagg caaagttcat ctctatgata agcgccatct gtttcgtatg
    15481 gcggatgaac atcaacatta tgccgcaggc gataaacgca tcatcgtgca gtggcgcggt
    15541 tggcgcatcc tgccgttgat ctgttacgat ctgcgctttc cgatatggtc gcgcaaccgc
    15601 aatgattacg atctggcgct gtatgtagcg aactggcccg cgccgcgctc gctacactgg
    15661 caaacattac tgacggcgcg cgctattgaa aatcaggctt atgtcgcagg ctgcaaccgg
    15721 gttggcaccg atggcaacgg gttacattat cgcggcgata gccgaatcat taatccccag
    15781 ggcgacatta tcgccaccgc cgaaccacac caggcgacac gtatcgatgc agatctttct
    15841 ctcgtcgcct tgcaggacta tcgcgaaaaa tttccagcct ggcgcgatgc cgatccattc
    15901 accttgtaag caacctgccg ctcaccgcgg cgggattgtt tcactccgta actctccgta
    15961 aaacaaattc gcgtggcgta atgtggcagg caacgtattc tgactaagag cctatcccac
    16021 caggcgttat tggcgcagtc agtttggaca cggacagcgc gcaaaaaccg gagcgtacac
    16081 gtagtacgtg aggattttga gcactgccca ggtccaaaat ggcaagtaaa atagccctaa
    16141 tgggataggc tctaagataa ttgctcgcca ttcgtgggta ataaaaacgg ttaatcactc
    16201 ccttatcagg atatcttcat gaaaaacttt gtacgcacaa ctttactggc agcgactctg
    16261 gcgggcgttt cttttggcgc tttcgccacc gctgttccca atcctcccct gcccgcccag
    16321 gatcctattg tccagcatct gaagctgaca aacgatcaga ttacccggat caaaaaactt
    16381 caccaacaac tggaaaccga cgtcagtcag atttctatga agggaattaa agacggtgcg
    16441 ctgatagagg tgattaaatc cggtaaatgg gatgacgccg ccgtaaaaca gcagcttgca
    16501 gccttcagta acatagaaca acaggctcgc tattatcggg ttaaatatta ttttgattta
    16561 agcaaagtct taacaccaga acagcgtcaa caggtacaac aagatctcgc ccaagcactt
    16621 gagtaaatat ttttgcccgt tattcctgga taacgggctt tatccaggtc gggtacaaat
    16681 tcatcttttt cttacagcat cgcaccatct cacactaccc gttacacaac gtagaagtga
    16741 aaccgtacgt ggggcaattt ggcgaggaga tggatttcca taccgacgat tatcgtattg
    16801 ttatttaaaa tcttcatctc attttttacc cgcttacaga aaacccagcg ttacaataga
    16861 ccgttttttg ggcttcgttt atgtaatcgt tatatcacac cctataccgt gaaacttgtc
    16921 ttttagccca atattaaggc aggttctgaa atgaaaaact ttttcgcagt ctgcatcatt
    16981 ccccttgtgg taacctggtc cgctactgca tcagcaaaag aagggatcta tatcaccggg
    17041 aaagcgggga catccgtagt caatgtctat ggaatcaact caaccttcag ccaggaggag
    17101 atagtcaatg gtcatgcaac gttacctgac cgtaccaaag gcgtttttgg cggcggggtt
    17161 gctatcggtt atgactttta tgatccattc cagcttccag tacgtttaga actggatacc
    17221 actttcagag gtgagacgga tgctaaaggc gggcaggata ttattgcatt tggtcagcca
    17281 gtacacataa atgtaaaaaa tcaggtccga atgaccactt acatagttaa tggttattat
    17341 gattttcaca atagtacggc atttacaccc tatatcagcg caggcgttgg cctcgctcat
    17401 gtgaagctaa gtaataacac cattcctgtt ggttttggta ttaatgaaac tctgtctgct
    17461 tcaaaaaata actttgcctg gggcgcaggt atcggtgcaa aatatgctgt aacagataat
    17521 attatgattg acgccagtta taaatacatt aatgcaggca aagtgagcat ttcaaaaaat
    17581 cactatgctg gtgatgaaca taccgcttat gatgcagaca caaaggctgc ctccaatgac
    17641 ttcatgctcg gcattactta cgccttttaa acactatcgg taaaatagct ggtcctgtgg
    17701 gttcccgaag gcgcaatgga ggatatcagt aatgaatact cctgcgcctt cagaaaatcg
    17761 ttgaacaggt gcaacctggc gccatttttc agtacactgc aacgtttctg gtatgggctt
    17821 aacttccggc tacccaaaaa cagtcccgtc ctgttgtatg atctctaaat gtgaatggca
    17881 cgattatgcg agatacttac aagtgtctgg tatgaagata tactgcgaac gccgatgtaa
    17941 acggcgcgcg taacatttta gagcgggaca cgccgtgctt gcctgtggaa ggagcgtgca
    18001 gtcaggcagc ccgttggagc aggaacccac gcccttcagg acgtggagga tgtcaatgca
    18061 caagaattgg ggaatcttta gcagaattta ttatctctac agtagcatct ctcttgttcc
    18121 cgtcataaat aacccaatgc ctccagatct gaaaccgcct tcagcatgag cactggctgc
    18181 aaataacacc aaataaaata ataatataac aactaccgag acaaaaaaca cctctctaaa
    18241 gtatttagaa ttcatacagt cagctcattt aaatttaacg tcacatgcaa ccatgcatgc
    18301 gtaaaacaag aaccacactc atattaataa tgattagtaa tgtgagtgtg cgtataacga
    18361 gatacagatg tatattcctt aatgtaacgg aacatcatca atgcaaatag caaccatcga
    18421 tatattaaac taaaataata catctagtgc atatataaac cattcgtatg gtggctgtaa
    18481 taaaattgtt gataaacggt catcccctaa acttccagcc tccccaccgc acgaacaatg
    18541 atgttcttta tatttaatcg taataaaaaa caaaacaata attaaacaaa aaataaataa
    18601 gatatttttg attcaaattt tcactccttc tgttatatac accaagtttc atttttttta
    18661 tgatcccgaa agaaaaaacc gtcatatgac gatggccatt gcattccata catgtaatca
    18721 acttcgttct ggtacacggc cctctgttct acatcattta tatccccgac aagaatcttt
    18781 tggaacttat gataatgata aacactacta ataaaattag gatcacgagg cactacgcaa
    18841 gcctgaaaaa agaatccaag gtttttaatt tcactggaat aagaatgttt accacaaaaa
    18901 tcaaaccaaa cttccatacc ataatctctg cgactcctga tgtactcgct cagaaatttg
    18961 tggttgttat taaagtcaac agaaacagca aataacccga cgctatttaa tttactgatc
    19021 ctttccatat gtatgagcac aaattcccag gggatcctga gtatatattt atttaaccca
    19081 tatttatggt tgaataaatt aaatgacttt tgtaactctt caaaaaacat caatgactca
    19141 attatgtggt tttcgccttt tttccagaag ggttcaacga aataaatatc agtaacatca
    19201 tctgttttaa tgcggttttt tgttacatgc acggggtgat atttaaccat gtgatattcc
    19261 gctgtgttat tctgtgccgc ttaatttcac cactgctgat taaaatcctt gttcaacagc
    19321 cgcaatctgc cgttgttgtt ccgtaagaag gataataatg tattaaatca gtaagtacac
    19381 atcacacttt cacactggca gttcgtttgt ttcctttatt tgctcaagaa caaagctcga
    19441 tgcagatcca ctaattgaag aattagttaa tattattttc tcataaaaac tatagtaatc
    19501 gttcatatct gtaaatactg tatgcattaa ataattaaat gatccagaaa ttcgataaaa
    19561 ggcaataacc tcaggcattg actttatttt ctcagaaata ctagcgtatt gctcctcaga
    19621 tatgttaatc ataataaaga cattaagtga aagacctagt ttttctttat ccaataaagc
    19681 gaactgacca atgataaccc ccctgtcttt aagttttttt aaacgtttga aacatggtgt
    19741 gggcgtaagt cccactttat atgcaagttg ccataaagtt tgtgcacaat ctttttggat
    19801 ttctttcaat aattctttat ctttatcatc taaatacaca gtcataggaa agcagaacct
    19861 cacgcattga ttttcataag tgaatagatt ctctttatta aataaaacaa gtatataaag
    19921 agaactctga tttaaaaaac catataagaa agatatcaat aaaataaata attactgtca
    19981 gggggtttgt gttcccatca gcattgtcac tgtcagcgtt ccctgatact caccagaacg
    20041 cttctctctg atgttaaagg gttgtgttgt cagggtaagg ggcactggca cacaacgtac
    20101 cgcctgccgt tgcccgggaa gtaccaccgg acgcgttgct gctttatcca cgttatccag
    20161 actgaactcc acgccacggg tgacaggaat acttcgtccc ccataattca tactgaccgc
    20221 ataatcaatc gtatcagcag aatcgctctt tataacctga aatcccgtac ctgacttatt
    20281 gcttccttct atcttcatct gtaatgaacg ggctttcaca cctccgtcat acagacacat
    20341 atccagatta gccctgcccg acatttgtga ggcattcatc cggtgaagat tcaggtccac
    20401 ccggggcgtt gctgtaccaa attgcggaaa gtaaatagcc gcattttcag caaagtggtc
    20461 tgttacattc agcgtgatat ctgtagttga tgtgcctaaa ggatcgtctc cgccccattg
    20521 taaataatcc aggactaacg ttgctttcca tgttccgctt gtaggtatct tcgcaagctc
    20581 ttctgaaggt atcctaagtt tcagcgacct accccattga catgcagcag cgttcatgtt
    20641 gatgacacca gtataacagg catcacgaac actgccgagc agtatgagcg tgatttcagc
    20701 atggctgatt tgttctctga aacgcagacg aatttttgaa taagctccaa aagcatacca
    20761 ccataccaaa tgtgtttctt cacacgcccc ctcattttca ttcctgtttg aacgacatac
    20821 ccatcccccc aacacatttg ctacactcca ttcttgggac cagacaggag tgatgaccgc
    20881 tacattgttc ttgtcgtaat tcaggtcgac ggtaatcgca tcggcgactt gtggcagtgt
    20941 agcgccagcc atcagcagga tggcaattat ccttgctgga taaacatatt ttcggatgaa
    21001 attaataatt gctgaccaat gggctgtcat actcgtccac ttcattttat tactcatagt
    21061 taacgccttt atctctacgt caggcttcct gaacggaatg gcgcagcaaa cctgccacgt
    21121 tcagcaaacg gatgacccgc ggcgatattt gcaacgcctg tggcagggca tccacgtcac
    21181 ttaattcaca ccgcacatca cccactacct gcataacatc ccgacgttta tgtactgaca
    21241 tcggacaacg caggatcctg tttttagaca gcagccacag gctggattct ttatgctcgc
    21301 tctgcaggct aaatcgcccg gaaggtccca acgacaaaaa tggatagttc agtggctgtg
    21361 cgtccagcag cggtctgcca tccttgtcca gtacgcggcc aacgtacagt cggctcatac
    21421 tggcgctgat gttgtgaacc agcagatgcc cgggtgtcag gaagtaacac ctgcttcccc
    21481 ctcccgcttt tacgcctgcc ataccctgtg aactaacccc tgcatcctca atggtcacct
    21541 ccgtggcgtt atagccttcc atcagcaaca gcgactgctg accaaaaccg agactgaacg
    21601 gctggctgct gccacgaacg ctgactactt tcccgctact gccctcgtcc ccctctgact
    21661 ccacgttcac cgccatgcca gaggccggtt caccgtcctg accacctccc cagaacagtc
    21721 cattacggga taacgccaga gacgagctgt agccagcggt gagtgaactg gcgctgcccg
    21781 cattacgttg atgggagtta ctgatagtgg cgctcagttc acccatacgg ccgctcatgc
    21841 gtccgccgag actcccgctc cagctgtcgt cgttataacc ggagaaaccc accgacagtt
    21901 cacgatacag atcctgctgc caggatctca catggttcac attccaggac gtctgtgttt
    21961 tttgattccg gctactgtga atatcggtcc cggctgaggt atacctatta ctgccagtca
    22021 ttgtcggtgg ttgagaggca tatgacacac tgacactcat aaacaagcca tcatcattca
    22081 ttccgtcatt tcgggttcgc catactcccc catgggtatt aatattcatg ccagccatat
    22141 taaggctgta cgttgcacta gcctgagcag attcgcggtg agaggcaggg atgtatgcct
    22201 gtcgccagaa cacattttct ttgtcactgt tatcatcata tccccggtaa accggccgac
    22261 cttctgtcct gctggtactg tatcccagta gggcatacca gttccccacc gaaaccgaca
    22321 gggaggcgtt catcgaagtc tggcaggtca tactggcatg cactgactgt ggatgacgac
    22381 cactacaggc atcactttcc gtatggttac gccacagact cgcggaaaat ccgtcgttgt
    22441 atgtcacctg ctcagtgtta ccgctcgtgc tgtctgtccc atgcagtatc ccggcagaaa
    22501 ggtccagcgt gccatccagc actgcatgct gtgaattcag tcgggtttca ctgtaccagg
    22561 cctcatgtgc cagagagata ccttcggtca gactgatatt tttccgcagc ccagtttgga
    22621 atccggcagc catgacagtc tcaccgtcat aatggctggc tttatccccg gtatcttcca
    22681 gcccgccctg aataaaccac tgggtctgtg cactgaagct attgcccccc ttactgaagg
    22741 gctgggtctc cgttcgccgc agaatcccat cctcatacac ccgcaacgcc agaggatagc
    22801 ttcccggtgg aagagaatga gtatccaggg tatgcattcc cggggtcagg aactgactcc
    22861 ccagcaactc gctgccacga taaatatcaa tacgggcatt tcgggtaacc tgaaccataa
    22921 ccggagtggc attatggtcc acctcatggt taacataagc ttgggtggtc ccggttcgta
    22981 atccatcaaa ccggctcagg ggaagcagac tgaacccaaa atcccccccc gtggcgctgg
    23041 acagattccg ctgatccatc cgaccagcct ggagataata ctgattgccg agatcctgac
    23101 ggacaaacag attgtcaaac caggcctgac tgttattgta atgttctgac tgattccaga
    23161 tagccgccca gtcgcctccc agataacgac cgtcaccaag ccccagggca ccgctaccat
    23221 tcagtgtcat attacgactg tggagatcat cactcagata cagcgtctgg cggtgaataa
    23281 atgcgctgac accctccggg gtcggagtca gccagcgttt atcacgtcgt tcttcatccg
    23341 gcaaccagtc ccggttaaga aacaaagata actgagcgtt gttctcatca aaaataaccg
    23401 caacatcctc tttatctgtt gccacgtaac cacactcgct gctgtctttt gcttctgaga
    23461 caccacagac cagattgctg ttacgtagca acggacggct gagtgcagcc agcgcttttt
    23521 gccgttctgc ggccggcaac gcggcaagcc cactgctttc aagtaccatc aatggggaca
    23581 tgaactgcac ggtgtccggt ttaaccacca ccggaaataa tcccagtgaa tgccctggta
    23641 gcaacacttc aatttgctca gtctgtcctt ccagcagaga ttcaaatcca ggagggggaa
    23701 taagagttgc ctggctggta aaactgcaca atcccagtaa ataatacatc cagaaataac
    23761 gactcacgta aagagacctg aattgcaatg aataataaga tcaataccgg atccggttca
    23821 ggtacgaacg gtgccccccc aaaaccggat cagatgaaga gctaataacc agttattagc
    23881 cggcagtgac agcctgtgaa atcaccagac tgaccaatcc gctgtattca ccggcaggca
    23941 ggttttgtaa ggctgctcca gccttctgac caatatccag gttcagcaga gctgaagcat
    24001 cgccagtttt tccgtccggg aacagggttt tagcttccag tacagaattg gtggtggtca
    24061 gtgaccgtcc tcccagagtc acttccatat caatggtttt ggtgggatcc aggacgttga
    24121 taagttgtgg agcattcaac agttttacat taaccgactt ggtctgatcg ttgctgtaaa
    24181 ggcgggtctg gagtgattta tggaccaggc ccttacccgg catgaaatcc agcttcatag
    24241 tcgacgggag ggatgaacca tcggcctgca gcagttcaag tgtactgtca atattggcag
    24301 tgacggtaat atccttctga accgcagaaa cagaaaaaga ataaacggtg gccaatgcca
    24361 cagctgcggc aataaaagat gttttcatgt tcataaaaaa taaccttgct ttgttgttta
    24421 ttacagtgat atatgtacac tcggtataca tccgctcccc ctgagaataa atgtagggta
    24481 tagcgtacgc tccgtgtgtt tttactttcc ggctgctgtt aaatcagcag agattaccgg
    24541 tgaatttgca cccgtacgat attccacacg aaatgcatta ctttttattc cggccggaat
    24601 atcagcactc ccgccgggat aaatactttt gcctatattc tgccagtggc atgtggtgtc
    24661 gcagttgcca gcccgaataa gagaaagccg tgtgtttccc gtattcagca ggtggtgacc
    24721 gtccgttacc agcgcaggcc tggggtctga cggagaaaca cgcagcaaca ccccccagac
    24781 aagattcaca cttacggatg aattttgctt tccgcctgcc tgtggatcat cttccagttc
    24841 aggaacagcc tcgaagtata cccgccaggc ttcctctctt tccggtgcct gagtactgat
    24901 aacacgtatt gttttttttg ttcccgggga aagagcaaat ttctccgggg agacaacaag
    24961 tcctgtctct atatcattcc ctgctggtac ctccttctcc tgtggcatac cggggtgttc
    25021 aatacgcatg attcttgttc gaatatattg cacatgatct gatttagaat agacgaacag
    25081 cgaggtggcc tcttcgcggc tactattaat ttctgccgcc atgggataaa cgagcatatt
    25141 cgccctggca tgaccacatg caaacatagc gacacagaga aacaccccgg gaagagtatc
    25201 tttaaaattc ataccagatt ttaccgtata aaagtcatct aaattttagt attagcatag
    25261 acagaaagtt atcagcataa agaagcaaat tacgattcag tgttaataca ttttgtgtgg
    25321 agggcatcat acggaataaa atttttcgct caatacctct gtttttttca ggaaagaaaa
    25381 aattagtaaa taaaagtcca cggatttcat tcaccaaaag cgaacgacag atctgtaaga
    25441 atcgctgaac aattaataac gccgcagtaa aaattttgga aattcttcat aagaaagttg
    25501 ttactgtgta cctgacttac tcagataaat ggaactgtat ttccccctcc ttcaaagcaa
    25561 caaatacgta acataacaac gtaggagaca gagaatctaa agaaagccct ccaggaggga
    25621 gatacaattc agactacaaa accaaataaa ccttaaacaa agccacaaat agactgatca
    25681 tcatgaggtt ttacaaaacc aggtaaaaaa aagtaagcaa agtaattaat ttagaaaact
    25741 aaagttacag ttagatcaga tttacttgct caatatctgt taaaaatatg atatcagcaa
    25801 acaaaaactt atatacatca tatggttacg cttgatgttt acacctctcc agcaaagtgt
    25861 aatcaatata atacactatt tttagattaa atattagcta aatattccac aaacaacaat
    25921 ataaaacaga acaactcacc atgaaaatac aattcacctt ttaaaacata atgttataaa
    25981 aaataccatt caaattgatg ccagtccctt acctgtcaat gttgtttacg gttcctttcc
    26041 cccttttgtg cgagtaagca acatgaatat acaagtctta acgaccaatg cctctgtcag
    26101 cccaaaataa gtcgacattc ctgtgcatgg cgctgcagca ggaatagaac ggcagacatc
    26161 agcgcggaat ggaatcccgg ctgaaacagg ctcgtctgcc atgagtcaaa acgctggagc
    26221 agttcgactt cagcttccag ccaggcatcg atcgtaaggt cgtccgggag ttggccggtc
    26281 tggcgttcgt ggagcgctgc gagaatgtga tcctgctggg gcccccggag tggagaaaac
    26341 ccacctggcc gctgcccccg gtgtgaaagc ggcagatgtg ggccatcggg tgttgttcat
    26401 gccgcaggac aggttggtag acgctgatga aagcgaagct ggaaaaccgc ctggagcgcc
    26461 agctacaaca actgagctat gcgcgggggc tgatcctgga cgaaataggt tacctgccaa
    26521 tgaccagtga ggaagccagt ctgttcttcc gactgctgaa ccgacggtat gaaaaagcga
    26581 gcattatcct gacgtcaaac aaaggcttcg cagactgggg agagatgttc ggtgataacg
    26641 tgctggcaac agcgatcctg gatcggctac tgcatcactc aaccacactg aatatcaaag
    26701 gagaaagtta ccaactgaag gaaaaacgca aagtcggggc gctgaccaaa agcgcaacgc
    26761 caatcagtga agatgaaatg gcggaaagcg gacagcagaa gtgatcaaac agcggatatt
    26821 aaaaatagcg aaaaacgacc ataaatcctg gcgttgacat cctcaagatt taatatcaga
    26881 agcttccatg ccgccgtatc cagacttcca gttgtccctg gtggcttcag aaataccggc
    26941 ctcccggtag acatctttaa cagtccgtcc ggattcaact gatctaatca cagcgatgat
    27001 ctggtgcgca gtaatacggg ctttacgcac agcgatctcc tgcgttggca gattgattat
    27061 gccggatgat ctctaaatgt gaatggctcg attatgcggg atacttacag tgcaacctag
    27121 cgccattttt cagtacactg caacgtttct ggcatgggct taacttccgg ctgcccaaaa
    27181 acagccccgt cctgtttccg ggtattatca tttccgtcag tcggcatcat gttttgtatt
    27241 gggcatcgtc aaaagacgac tggccggcca gtcgcatatc tcgatgcctc aattcagtca
    27301 tcatcatgtg ggtttaagtc aggaacgtgt caaaaccatt ccaaacgagt taatcatcat
    27361 tcagaaaatc aatttgtggg cgattattcc atttatcttc aataaaagac agaaagcgtt
    27421 gaaataaagg agaataatac tgacgatgac gccatacaag ataaatgggg agatctggaa
    27481 ctctccattc aggaagtata atttcaagtt cattattttt taagtattta gtggcaagcc
    27541 aggccggagt catgaggttg atacccttcc cttctaaaac caaattaaga acactcaaaa
    27601 gattattgga agataaatga acattaacag cgccactaat agtgtatgat tcctcttgac
    27661 ggaaaagagt aagaggtccg gaaagaccat ggttgtgaag acccacaata atgtgatttt
    27721 ccaaatcgcc aggatgtgag atcctgccat atttctgata tatttcggac ttgcacaaag
    27781 aaccaacttt aaagggctta tctttcgata cacgagatcc tcactttcga ttatgccact
    27841 tttaaaaacc agctcatcaa actccaggga tttactaaaa aaatcgctac gctctcgtga
    27901 atccaggtag atttttgtat ccggatagct agctgtaaat tcccatatcc acttattggc
    27961 aagaaactca cagacaatag ccggagccga aaattttata ctccctctga taattttatc
    28021 cggatttcgc aattcatcca gcaaggactg aaaggaagat gttatccttt tcatgcttgc
    28081 ataggctgtc tgaccagctc cagtcagctc taagtgatgt gaatcgcgcc gaagtaaagt
    28141 aacctcaata gaattctcaa ggcgactaag cgatttactg acagcagaaa tgctaatatc
    28201 taattcccgc gcagcccggg aaagattccc tacttccgcc actttaataa atatcatcca
    28261 atctcgcata ccacgattat tgatcagttc catcattatc ttccgttgat aaaagaaatt
    28321 cttatattaa aggagctatc aacgacttac tgatgcgtca ttgtgtgcct caatgtcctt
    28381 gatatcatca taataaaaaa cctattggct gcaaaatagc atctgaatcg atcatgattt
    28441 tgcatccatc tccggttact aattgaacct gtttaccact cagtgtaaat accctatctc
    28501 agaagcgatc gtcaaggttg tcgccgaacc agatctcaat aataaagtgg ttcattgtca
    28561 tgcgcccgtt ctgcaaaggc attctccttt tctgtgacgc agtctggagc gcattaattg
    28621 tatcgttcac ctaacaaagt atcccgtgga aacaagcaaa acatcgccag attattctta
    28681 cttgagtccc ccacccggct cgacattatt tgtgaaagcg gaggaaacag aacagacggt
    28741 ttaaataaga cgcttactca aaacataaac ctatgtgcag gctcctctca tttcgtcacg
    28801 tcgctgatat ccagctttac tggtgccagg ggaagatatc tgcgcaaggc aataattccg
    28861 gcgcaacaac aaccactccc gctgggcctc tgtacattca aaatcgccca tgaccaaaag
    28921 ccagcgggta gaagccctgc gccagtgacc tgctgcctcc agattctgcg caaccgggtc
    28981 tatcacggct tccggtgtta tcttatttct gctcaaaatc agcaccatca tttgggatat
    29041 agcctacaac ccctgcccgc cgatgatggg ggaggattcg gtatgcagca ctttcatcct
    29101 ggtctccggc tcagtcagct atccgacgtg cccccttatg ccgggccagc agcgaagaaa
    29161 atccgggcgt ggtgtgataa aacaggcgac gtttcagcca gcccacattc tttcgctcct
    29221 ttgtgttgat acgaccaata cgctgtgaac cgatgactgg attgttcata cgcctttctg
    29281 tggtatacag gtatgtgaac cccagctctt cagccacatg aatataatca gaacaatacc
    29341 agccctcagg ccagcacaga tgctgactgc agtaacccag catctccctc atccgcttac
    29401 gactaagaag aatatcgaca cgaagcaaat ccgacggatt acgggacaca ggcttctggt
    29461 cccagcgtcg gtgggtgtgc gtgtgcgaat gaaactcaac aaggccactg aggtgcatct
    29521 cccggacctc tgaccagcgc agcatgacct catcaacccg gccttgttta accagcatct
    29581 gacactcatc atgagagtac accggttcgc ctgcaggaat acgaaccggt ccgtcactga
    29641 tcaaactggt cacaagaaag agatgcgcat gcagattaaa ctcctgcagc accggaaaaa
    29701 cctgcaacca gttatccagc cagccgccat caaaagtcag catgacgctt ttacgaggca
    29761 atcttgcacc atgataaaaa gcttccaccg ctgcagcagt aacggttttc cagccagatt
    29821 cagccagcca tttcatctgc gcccggaacg tacggggaga taaggttatc tgtccgggtt
    29881 tatcactgac atggtgatac attaataccg gtaaatgtcg tgcataagac atatgcttta
    29941 ttcctttatg taaaaaataa attattttta cgcctgaggg gacaagaaaa agccccctaa
    30001 acataaaatc ttaaatatca catatgaata cctgacagat aaacaaacct tatactaagg
    30061 gcttataaag ccccgctcac aaaagagtga atcaaacaaa tccacaaaac agaaaataat
    30121 aaaggcatca gtgtccgtta aattatttta cgaaacataa tattcctctc cctacaaaaa
    30181 aagatgaatt tcagatttta aaatcaatca gcaattgatt tttctgcaat gaagattgct
    30241 aaccatattt gccttgagta aattttcaat acatcctcga acctgatata cagtattcgc
    30301 cttattcact gatacaggaa gtatgagtgg aacagacggc tacgtatcct cctgcgccaa
    30361 tgcacaggcc ttaaaatcca gcgtccaggt gtccgcaggc acttcctgat tgccatcaac
    30421 gaccacactg aaactggcgt tatctgcagc ggttcttaaa atggcgccac gaccactcac
    30481 cgtatctggt tgccacccct cgccctccag gcgaacctga atgtgatggc gaggatcctg
    30541 ttgcccgctc agcagcaata cggtaggcgt gttacccgcc ttttgctcat cgctccatac
    30601 ccgaaacccg ctgtgactgc cgtgataagt cacccagcct tgcgcaagca ccatcccatc
    30661 tggcacatgc ccggcccgaa agtaagtacc tacacgtagc gttgtctgaa gtttttctgc
    30721 ggcgttcgct atcggcacca agctactggc agcgaccagt aagcttacgc tatagataac
    30781 cgttttcact cgctgtattt tcatccacat tattctctcc ttcagaatcg gctatctgca
    30841 gagaccgctc atttgataca agcccgcgat tcccttgtgg gcaggtaggt ggtagttaac
    30901 ccgacattgc tgtgctcccc atttcaccgt cagttcgccc ttatccgcca gaccagtgag
    30961 ataaacctgg ctatcagtat ccaccagatc agcgctgcca tcctgcccat tgactataac
    31021 ctgcgccccg aaaggaatgg cgctaccatc ttcccgtttc agcgtcatca gtgccctggc
    31081 cccgatgcga gtgtgaaact tcgcttccac caccgcccct tcggttggca ccacgcgcac
    31141 atcggtttgt gtgacctctg cgtcatccgg tagttgcgac ggatcgaggc tgactgtatt
    31201 ctcctgatag acgctcaggt tgcccactgt ggtgtcgcca cgaaaatccg tcttaacgcc
    31261 aggccagggg ccaactggca cccccgaggc ccctggcgct tcaaccagcg ccactgagcc
    31321 ttgcaaaggt tgccccagcg tcacaccatg atggtggata actatacctc ccgcgatatt
    31381 gactcccatc tggcgcatcg cccggctgta gctatagtca ccacctaaca ggccgtaagc
    31441 cccattccat gccaagtgca atgcgctgtt attaccacca cctggcgggg catcggcacg
    31501 gtaactctga cgcacctccc aatccagttg ctgactgaat gcctctccgt tgacccccac
    31561 ttgttgcgtc tgaccaccgt gtgatggtga agtcatctgc caactagcac ttacattatt
    31621 ccccgtccag cggcttaatg gcatactgaa ccacaggctg gttatgttct ctttacggtg
    31681 cccgccattg cgccacagcg ttctgttttg attccagttc aatgacagcg agccccctcc
    31741 gatagaggtt ccccaactca gtccgtagct gtcatcatga ccggggcgat tacgccagtc
    31801 ggtacgggaa ccgattaaac tcagattgcc caaatgcctc ccccatgact gactcaacat
    31861 cagggtggta cgtgagctcg gctgcaaatt ttcccgccac gaccatagac ggttgccatt
    31921 atgtcgataa ctgtcgagca catcggatag ggtgttatag ccctgcgagg catattgcca
    31981 tctcgtcaga aacaaatttg tccccgtcgc agtcagctgg ttgctgtaac gcagtcgcca
    32041 ggaggctcct tgctgtaccg cttccccctg acgctgactg tgtgtgtcgc ttccatcgac
    32101 agataaactc ccccaccgcc cgagagatcc tcccaaacca agcgatgcag cttgatagtg
    32161 cgttgcactc tgtataccgc catatgcagt gagattccac ggcagaccat acatcaacgt
    32221 agcctgcgcg atctgcgcct tatccgttgc agagtctgac gatcggtatc ggcccgccaa
    32281 caggctgtac ttcaaatatc cctggtgcag tgctatcgcc ggggtctgat acggcaccac
    32341 aaacatttgt gtactgccat cggcctccca cacggtgaca tgcagatcac cactactgtc
    32401 tgttaccgac agatcccgca gtgcaaacgg tccgggcgcc acggtggtgt tgtaaatggt
    32461 gtaaccattc tgtttgacct ccacccgagc ctgcgtgcgg gcaatcccac gcactaccgg
    32521 agcaaactgc cgctcactgt agggcaccat gttgtcatcc gatgccaaca tcacaccggt
    32581 aaatggcaca ctatcaaata tctccccctg cgaagtcttt tgccccagag tcagacgact
    32641 ttttagtgag tacagtccac gctcagcata ggtatatgct gcctgccact tccccgacag
    32701 ttgactactc cgctgccagc tggtcgcatt gcggacacgc cacgcaccta tattgattcc
    32761 cggttgcagt tgtacccagg aagagttgtc acgccccacc atatccattt tgtaatccgt
    32821 ctgcgttgtc ctcgcactgt agttcatcag aaacgccgga ataccatcat cccaaagatc
    32881 ttctggagcg atccccttaa attccggacg caacgccaac tgcggaatac tcagttgcag
    32941 ttgctgatta ttgatatcca gtaccgcttt agcctgtgga atggcggtca gatccgcaca
    33001 ctcatctggg gtctttgctg ctttccacaa ctgagggtaa tcttccgttt ttacgccgta
    33061 gcgtgaaagc tgactgaccg tcaaacaaga agccagaaaa ggcgttcctt gcccatcctt
    33121 ttctaatttg aacaccacat cacgggtgtc gacacgttta ccattcacca ttacgtccac
    33181 tcgataagtc cctggctgtt gtaccccctg gttaaagagc gacatatcaa cccctttcgc
    33241 tgcatcgccc aacattgatg catcgaatgt gtaagtgtgc gcatttgcgc agtgaaccac
    33301 tcccgcgata aacagtagca aggcaggttg tttgaacttc atattctgcc gctaagcccc
    33361 tggatttatt taaggacgta gtggaacgga tgactttcac caccaaagtc agtaataact
    33421 ctccactcga catcaccatg ggcactacct ggcatattta gtgttttgtc agcaaaaggg
    33481 gggatatact caagccctgt aatgggcttt ccccctactg tgacggaggc taaattcatg
    33541 taaaacgggg tggggttctc caccttaagt ttgttgcccg cctccaccca tcttaaattt
    33601 cctgcaacat cttccggcgt ccccttcacg gcatccgggc ggaaaatcag cttatcacag
    33661 acgttgatgg acaaattgag gtcaagggtc gcgcccttag cctgtgtatc cgacggttca
    33721 ttttcgggtg gtaccgcctt tacacagacc cactgtaaag tctcacgatc cgttggcatg
    33781 tcaccaccag tacggacaat acgcagttga ctctgctggt tcgcttctaa acgaaataga
    33841 ggcggcatca ccaaaaaagg agcaggcgaa cttttgtctg ctgctttgac tgaagactga
    33901 accaaaatag ggtaattctg cgggttgctc accgagagcg tggctccaac tgtaccagcg
    33961 tgataaatca cccgtgtagc ccccagcttc acgctgaatg atttagtgtt taaacttaat
    34021 ttctgctcag cggcatacac tggaggagtt atagaattag agacgaataa aacagccgcc
    34081 attacaccaa aactaataat tttcatatta caagttataa aaaaatgtat gacttgatat
    34141 ttattgcgct ttaataaagc gcaataaaag ttgtttacta ttaagcttga tactccgcta
    34201 tgtgtatcgt cactggataa gtatcagcct ttaccgtttg tgatccagac aatttcacag
    34261 cgactttgtc tgtcatgtta tatatccacc acttatgcga agcaccatcc actaatgaac
    34321 cttttgagcc acaggctacc cccccaaagg taattttaat ggtattacca cttttaccaa
    34381 ttaccgtcca cacatcgctg tcgttgccca ctgttttcag gtttagaata atctcccgtt
    34441 accacgtatt gtttgctcga accgcttgcc gaaagtatag caatagcctc atcaccctta
    34501 tgaggccctg ccaccaagcc agacactgga gtaagctgtg cttgtagttg tccaggattg
    34561 ctgaagttta catccgccga cacgccagtg cttgtattcg gcacgagcga gccagcataa
    34621 caactagcag ccataatgct caatgcgctt gcgataatta aatcttttat gtttttcatc
    34681 ggaaatccac cttttcaaaa tcccccagca catcaagaat gaataatgtc ataccaaaat
    34741 tcaccgtaca gaaaagcctg tggctgggaa tactttaaga cttaataata cttaatagaa
    34801 gttgcttact attaagcttg atatgccgct atgtttacag tcattgggaa gacatcagct
    34861 gggacattct gatctccagc tagtttaaca ccaagtttgt cgttaatatc atatatgatc
    34921 cactgatgcc cattgtaatt tacattcccc tttggtgagg ttgtctcacc atagaagtac
    34981 actttgattc ctttgccagt atttttacca tataaagtcc atgtatcgcc attcatgaca
    35041 ttctttgcct taaaatccgc tgcgatcgcg aattgtttag cagcaacaga actaactgca
    35101 atagtcgcaa tctccgtatt agacttaatc accccagcct ttaagcccgc cactggagca
    35161 aatgttacgc tcaactgctg gggagaggca aagccaatat ccactgaact ttgttgctct
    35221 gagcccacca cgattgaacc agcataacaa ctagcagtta tcatgctcaa cacgcttgcg
    35281 ataattaatt tttttatgtt tttcattgaa aaaatacctc tttaaaacta agttaaaatc
    35341 gcacgtccag aatgttatga tgtcataaca aattttacca tatgggaaaa tccctggctg
    35401 gtaataacaa cttgtactta ttggtatttg ttaccaattc aaacaagtaa tgtcataaaa
    35461 atctatatat cagagcacct cttaatctga aaaaaattgc gttattgcca atataaccag
    35521 cattgatgtt aacatcgtat tgtcagggtg gaatagaatg ccagtcaaaa agcaattata
    35581 ccttccattt acattcaagt gataacatta caatgaaacc caccacactg ggtgtgggaa
    35641 acttatcttc gaagagagga taattatcag gcatcgttgc aacattgttt atatttaaac
    35701 atacatctcc taactcgacg gtaagattat tagttaactt ttcctcgcag ggaagatctt
    35761 taatggaaaa tcttgttttc cgaaacggaa aagcaattat aacgctccaa cgagagtctc
    35821 aacactaaga gctgactgac acaggccaga ctgattatac aggcatgaaa aagctctccc
    35881 cttcctttca gttcttgctg gattatgcaa acgtcgcacc acctccccgt gaacatggca
    35941 cattaatttg aagcaactct catccggtat cgcttttcag tgcagcgaaa ttcatcgcag
    36001 gtgcccctgt aaatagaccc gttttagttc catgcatttt taagattccg gccagataac
    36061 gttattggcg gtattcctcc ggtatcatat tgttccgcga ttcatgtgga cgttcgcagt
    36121 tatattctga taacccttta tccgtaattt cccgcacctc attcagcgtt ctgaacagat
    36181 aagaattgag tatttctgta cggtatgtcc ggttaaaacg ctcgatgaaa acgtttttct
    36241 tcggcttacc cggctggata aacgccagct ttactacatg tttctttgcc cattcagcca
    36301 gtgccagcga gataaattcc ggtcccttat ccatacgcag catggccgga taaccgaggt
    36361 tgctgtaatc ctgtcgagta cacggaccac tcgcagagct ggcagattca gatcgatttc
    36421 aatcgacaac gcttcacgat tacagtcatc aacaacattg aacgtgcgaa aacgacgccc
    36481 ataaaccagc tctggttcag cgcttccggc gtgaccagtg gcgagggatt gcgtaccggc
    36541 agccgttgtt tacccttacg gcgaaaattc agcttgagca gacagtaaat acggtggagc
    36601 cttttgtgat tccacgcgta tccctgccgc cgtatccaga cctccagtta tccctggtgg
    36661 cttcagaaat accggcctcc cggtagacat ctttaacagt ccgtccggat tcgactgatc
    36721 taatcacaac gatgatctgg tgcgcagtaa tacgggcttt acgcatagcg atctcctgcg
    36781 ttggcagatt gattatgtcg gatgatctct aaatgtgaat ggctcgatta tgcgggatac
    36841 ttacatactc acgcgttgag agactttcag ttcgtttgta cggtgaatgg atgccgcagg
    36901 cggggtttat taacgggatg cccgtcaagg tgcgggtaat gagggattgc atcgtgatca
    36961 cgccgcagca tacccgcgga ctctttgtct gtattgaagg gatgggcgtg acttttatta
    37021 atcaaaagaa ggtgaaagcg tggctaaaaa cctttccggg ggcgctgaac gataccgggg
    37081 atattccggt gattaagcgg agcaggctcg aaggcgggat ttgacagggg gttaaataat
    37141 aaaaaagccg ggaagagtta atttctttcc cggctttatt aacacctaat gtattactgg
    37201 tatctattat acaattctat ttcagccaga acatattcac tgaaaacata tttagttttc
    37261 tttatctcct tcccttctgt atagcaatat acagaagggt catcatctct ttcaataaaa
    37321 aacaacgcag aatatccttg atgcaataaa aaagaataca ttccatctgg aatgcttata
    37381 ttattttctt gcatcaactc aactgtatac ttatttatat catttatatc tttaaaaaga
    37441 agatcagtcc cttccttaaa gtcaccagat tcgacaccca aaagagataa aaataattta
    37501 taagactttg gtaattctcc atagttttct tccagataca gtatatcctc tgtagaacac
    37561 cccttgacag tcatgttttt tgacgttatc gatgcaatta acttcttaat ttcaatcaaa
    37621 aaagctcgct gttccatatt accctcccca tgtcacatta acttcaatat taggatacat
    37681 tgctttgaat tgagttataa cctctgaaca tgaggggcat acttttaatt ccgagtatag
    37741 atcaatacga ccttttgccg ttgttggaaa tttattggct atatgttcaa atattttaac
    37801 ttcagaatcg aaagccctgt catgccccac ttcgaaggta gtgaactttc gacttccgtc
    37861 tgctggagta tgtaaaaatg gtgaattatt cgtattcatg ccactaagtg catcagccgt
    37921 tcctgtttga ccattaatat tataattgga tgttgcaata tttcgttttc cacctaccta
    37981 gccagtgctt ctataattcc tggccctttc tgccggagaa cctttaccag caaatttttt
    38041 acataaacct agcggatcta tataacttag cggattaggc gcatattggt agaggtttat
    38101 tccacccgct aaccctatcg gatcgcccga tataaacttc ccgatatccg gatcataaaa
    38161 tctgtacaaa ttgtaatgca gccccgtttc cctgtccaga tattgcccct ggaaacgcag
    38221 gttctgctgt acgggccggg tttctttttc atgcgtcagg ttcccccata cctgatagcc
    38281 cgcttcccag acaatattgc ccccgccgtc cgtcatctcc tccggcgcgc cgtttacgtc
    38341 cgtatggtaa tacagcacct catccgcttc gccc
//
LOCUS       DAGWFR010000018        37941 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.018, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000018 DAGWFR010000000
VERSION     DAGWFR010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 37941)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 37941)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..37941
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.018"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..701
                     /locus_tag="MOX77_001094"
     CDS             <1..701
                     /locus_tag="MOX77_001094"
                     /EC_number="3.4.19.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="beta-aspartyl-peptidase"
                     /protein_id="HCA3356695.1"
                     /translation="IGVKCAVSDHRSAAPGGNQLTSMAAESRVGGLLGGKPGVSVFHM
                     GSSKKGLQPLYDILENSDVPIGKLLPTHVNRSESLFEQALAFALKGGVIDITTSIPDP
                     VAPAEGIARAVKAGVPLSRVTLSSDGNGSQPLFDAAGNLTGIGVAGFESLLETLQTLV
                     NHYGFSLTDALRPLTTSVAAFLSLDGKGEIRPGNDADLLVFSADLRIEQVYARGKRMV
                     NEGKACVKGTFEPA"
     gene            820..1728
                     /gene="hypT"
                     /locus_tag="MOX77_001095"
                     /gene_synonym="qseD"
     CDS             820..1728
                     /gene="hypT"
                     /locus_tag="MOX77_001095"
                     /gene_synonym="qseD"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypochlorite stress DNA-binding transcriptional
                     regulator HypT"
                     /protein_id="HCA3356696.1"
                     /translation="MDVTGAGLHNIETKWLYDFLTLEKCRNFSQAAIIRNVSQPAFSR
                     RIRALEHAVGVELFNRQVSPLQLSEQGKIFHSQVRHLLQQLESNLTELRGGSDYTLRK
                     IKIAAAHSLSLGLLPTIVKQMPTQFTYAVEAIDVDQAVDMLREGQSDFIFSYHDENLQ
                     QAPFDNIRLFESRLFPVCANNGRGEPRYTLEQPHFPLLNYSQNSYMGRLINRTLTRHA
                     ELSFSTFFVSSMSELLKQVAMDGCGIAWLPEYAIRQEITDGRLIVLDADELVIPIQAY
                     AYRMNTRMSQVAETFWRDLRGLQAAL"
     gene            complement(1734..2468)
                     /locus_tag="MOX77_001096"
     CDS             complement(1734..2468)
                     /locus_tag="MOX77_001096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/glutamate racemase family protein"
                     /protein_id="HCA3356697.1"
                     /translation="MKHTIGILGGMGPAATADMLEKFVELRHVSCDQQHIPLIVSSIP
                     DIPDRTACLLSGGPSPYRYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQNVAKARMI
                     SILDATLGDIPPSARHVGLLATNATLATGLYQKKALARGLTLIQPEDAGQALVMQAIY
                     TLKRGDKTAAQALLLPQIDSLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDSTASL
                     VRAAIRWYESWPDTRASLTGEQRLTA"
     gene            complement(2707..3237)
                     /locus_tag="MOX77_001097"
     CDS             complement(2707..3237)
                     /locus_tag="MOX77_001097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463368.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system tube protein Hcp"
                     /protein_id="HCA3356698.1"
                     /translation="MAGKWNVLSLLAFRPCQPALPHDNHGGGMDAIYLKLDGIEGESQ
                     IKGFENQIKLIAYNHNPTKRESGEARGTYIGGLTLTKPVDLATLGLYEHYCNGKTVKE
                     GVLTLCRSDKGAMLPFIIYTLTNVRISRMSNHGDAEGSATETVDLVYSHIRWDIPALA
                     SKSKTRRPLHRQALWR"
     gene            3955..4968
                     /gene="trpS"
                     /locus_tag="MOX77_001098"
     CDS             3955..4968
                     /gene="trpS"
                     /locus_tag="MOX77_001098"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HCA3356699.1"
                     /translation="MNTLPIILTGDRPTGSLHLGHYVGSLRQRVALQQDHQQYVLIAD
                     LQGLTDNGSNPQKIRDNIPQVLADYLAVGIDPALTTICLQSALPALAELTVLYMNIVT
                     VARVERNPTVKNEIAQKGFTRSLPVGFMAYPISQAADITAFKAEMVPVGDDQLPMIEQ
                     TNEIVHKMNSLFSSPVLRPCQALLSDTGRLPGIDGSAKMSKSLVNTLLLSASEETIHR
                     AVSAMYTDPNHLKISDPGKIEGNVVFTWLDAFHPDKAKVAAMKAHYQQGGLGDRVCKN
                     ELETCLQELIAPIRERRATFIADKGMLMELLKKGSERAHEVTQKTLQEVKRGLGLPTL
                     FQV"
     gene            complement(4969..5742)
                     /gene="uxuR"
                     /locus_tag="MOX77_001099"
     CDS             complement(4969..5742)
                     /gene="uxuR"
                     /locus_tag="MOX77_001099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Uxu operon transcriptional regulator"
                     /protein_id="HCA3356700.1"
                     /translation="MKSNTSQQRPYQEVGAMIRDLIVQTPYRPGERLPPEREIAERLN
                     VTRTVVREALIMLEIKGLVEVRRGAGIYVLDSADNNEMEGADVNHCNDAGPFELLQAR
                     QLLESNIAEFAALQATREDIIKMRQALQLEERELASSAPGGSESGDMQFHLAIAEATH
                     NSMLVELFRQSWQWRENNPMWLQLHSHLGDTLYRKEWLGDHKQILAALIKKDARAAKL
                     AMWQHLENVKQRLLEFSNVDDIYFDGYLFESWPLDNVDA"
     gene            6092..6757
                     /locus_tag="MOX77_001100"
     CDS             6092..6757
                     /locus_tag="MOX77_001100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HCA3356701.1"
                     /translation="MIKDTVFFAPSVSGGSNASSLSSRHRRAAIILHEIYGINAHIQR
                     AGHEWMTRGFDIYIPALFPHHTPFRYEQQEEAYRHFSANVGFDPAVVTTLLHDLRAQY
                     ETLIVVGYSVGATLAWLSAASGLCDGVICYYGSRIRQYLHLAPLCPALVIIARYEPAF
                     DPRAMRQTLEKRPRVQCKMYDARHGFCDADSATFDAALSHQVMDDVSAFIRDITCANT
                     SPD"
     gene            complement(6774..7235)
                     /locus_tag="MOX77_001101"
     CDS             complement(6774..7235)
                     /locus_tag="MOX77_001101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF302 domain-containing protein"
                     /protein_id="HCA3356702.1"
                     /translation="MSTILKPFLSAVTLMLILIRPGFATEDGAITMVKTYSAYDYLQT
                     RARLMHAVADHGLVLFGEFDHARAAQNVNLKMPPTTVLVFGNPKGGTPLMLAHPELAL
                     DLPFRVLISQQADGRTLVSYHPAETLQRYGLDAADIQALKKLEQLVEKSLH"
     gene            complement(7446..8357)
                     /locus_tag="MOX77_001102"
     CDS             complement(7446..8357)
                     /locus_tag="MOX77_001102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356703.1"
                     /translation="MHTFRPYLLRHSDLLYEDIPLEIREQIILLIINTLGNCSSFYDM
                     TLYCYHNSHSDEVYRRICKTLRKEYGLFTLYAHSTSYLDEMSNLLLKTDDKRKHIDTI
                     ELAFNYIDTYLRTYEVTLGLEPDKAISELNNIFHEHSLKYRYENGRIVRLRRIKRLKN
                     ICYYLYSPGEYGFVEYDLMEAYNRLMLNDFACVVRECHAVFRSVLLRIHERKSIVYHE
                     QDSLNTLMANLMARGVISAEYVHKFHFLIDVLESEIFLPMAPEKSHHHHAMMLRISEE
                     LACSIYYLTERSIFFLTQRAEEDGVAP"
     gene            complement(8718..9326)
                     /locus_tag="MOX77_001103"
     CDS             complement(8718..9326)
                     /locus_tag="MOX77_001103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1062 domain-containing protein"
                     /protein_id="HCA3356704.1"
                     /translation="MKVIWTVTPVGYQRIAKRCPSCSVKRDFTPSGAFRVNSQKKVLD
                     VWSIYKCTHCDYTWNISLFSRLPVSKINRNLYCRLMANDAATVQYFAYDNAILKRNNA
                     ELSGQPDFHIQERWLVSIASHKQVSVSVRISRSFQVSLLSILKKQLLLSAAEIKRRIE
                     TGQISGVTMKMLKSRKLKNAKYDLQLSVETLYDRRRIVLTRR"
     gene            9814..10071
                     /locus_tag="MOX77_001104"
     CDS             9814..10071
                     /locus_tag="MOX77_001104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjhX family toxin"
                     /protein_id="HCA3356705.1"
                     /translation="MNLSRQEQRTLHVLAKGGRITHIRDASGRVTAVECYSREGLLLA
                     DCTLAVFKKLKTKKLIKSVNGQPYRINTTGLNNVRAQPDNR"
     gene            10076..11707
                     /locus_tag="MOX77_001105"
     CDS             10076..11707
                     /locus_tag="MOX77_001105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HCA3356706.1"
                     /translation="MMMDISAVIFATHRIRLLPDEGKIPWDEPAFSQRMLENHLSQDH
                     DWASRRLTVIEQQVTWITRQLPAGARILDLGCGPGFYTRLLAERGFHCTGVDFSPASI
                     TWARQQAQAANLNIDYIQQDIRTYHPTEPFDFIMMTFGELNVFSAADAQSLISHCAQW
                     LKPDGKLLVEVHTFDEVKRQGMAQPGWQRCPHGLFLAVPHLLLTENAWDEEAQTSSTQ
                     FWAIAENGCTTRFGSQMKAWRDDEYISLLGDAGFTVLQRPDSHTWPVGETFAGKLFAL
                     LAEKASTSEGIALSKRNNPMDIPRIFTISESEHRIHNPFTAEKYATLGHALRMKPGMR
                     ILDLGSGSGEMLCTWARDYGVTGTGIDISPLFTTQAKQRAEELGVSEYVHFIHNDAAG
                     YIDEEKYDVAACVGATWIAGGVAGTIDLLAKSLKPGGIILIGKPYWRQIPATEEIAHA
                     CGVSSVADFRPLPELVAFFDQLGYDVVEMVLADPQGWDRYEAAKWMTMRRWLEENPDD
                     EFAQEVRTELTAAPKRHVTWTREYFGWGVFALIAR"
     gene            12120..12836
                     /locus_tag="MOX77_001106"
     CDS             12120..12836
                     /locus_tag="MOX77_001106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HCA3356707.1"
                     /translation="MGRKWANIVAKKTAKDGATSKVYAKFGVEIYAAAKQGEPDPESN
                     SALKFVIERAKQAQVPKHVIDKAIDKAKGGGDETFVQGRYEGFGPNGSMVIAETLTSN
                     VNRTIANIRTIFNKKGGNIGAAGAVSYMFDNTGVIVFKGTDPDHIFEILLDAEVDVRD
                     VTEEEGNIVIYTEATDLHKGIAALKAAGITEFSTTELEMIAQSDVELSPEDLEIFEGL
                     VDALEDDDDVQKVYHNVANL"
     gene            complement(12880..13155)
                     /locus_tag="MOX77_001107"
     CDS             complement(12880..13155)
                     /locus_tag="MOX77_001107"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356708.1"
                     /translation="MSASGIYEARHLKEHREIVSSPILLAFAYLADGIRRMKHENYLM
                     FYIRIQHHIKTGSSQPFKAMCQIKWQLININLKTYISGQIDFFITAL"
     gene            complement(13317..14192)
                     /locus_tag="MOX77_001108"
     CDS             complement(13317..14192)
                     /locus_tag="MOX77_001108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017465694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HCA3356709.1"
                     /translation="MTSDKTLKQAISNITIWRKGEQRAPHKPLLLLYVLSHYRQGHDR
                     LFDYGSEIHEQLLDLLERYGPQRREQRPDMPFWRLKGDGFWELQNAEFCSTSGSRQPP
                     KRELIEYNVAGGFDAVNFALVTKKRKLIDTLAQQILEAHFPTSIQEDIADEMGFDIRT
                     SFRQRDPKFRQAVLRAYNYQCAVCGFNMRHDNAPIALEAAHIRWKQHHGPCEVPNGLA
                     LCAIHHKAFDRGSIGLDENMRVVVSDAVNGGGVVQRLFWDFAGKEIALPPVKENYPGE
                     RFVEWHRKEVFRGEH"
     gene            complement(14270..14509)
                     /locus_tag="MOX77_001109"
     CDS             complement(14270..14509)
                     /locus_tag="MOX77_001109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010989316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356710.1"
                     /translation="MVPAFFLPACLQRSDMELNNEYQNYEDEDDESADDLPPSHHPRS
                     FQSIIGWLYDKAVSGIAGIESAEMLAARYLEDAKG"
     gene            14773..18072
                     /locus_tag="MOX77_001110"
     CDS             14773..18072
                     /locus_tag="MOX77_001110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016505867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356711.1"
                     /translation="MSQSEYASILKCTPWLAKFLTRRGLKQPDHRPLYEYHATSEEYD
                     ELKRLLRAIGVPDGYKSDKGYAACFTLFCSEWYRRDYEREYGWAWEPIYKTIGISASS
                     SKMGKIIPKGLDGYWGRPVRFYDTERRNFLGSLFSEGGLPFRLLKESNSRFQSMFSLI
                     LNQYDQAKSSNISTFALVHAAVEKSSLPVVFKEDTSVELISRMAEQLVSLVQIYDLSN
                     HTEPVKELERVHPKWRDSFPVPLDDDTGTSFLNGLLRTASTESKPRLQKNKTTLCQFL
                     WSENHPEALQALISLPEELSFSIDIEPSTTRFELAIYEDGNEIASLGPAYATLSNSQA
                     KIKVRKREIKFYRRNPTVSLFIVARAGGMFFGSNLLEGSEVAVGDVPLVFVSDKNEWL
                     LQGQASCSVRGSHVLIVLPKDGCLASEHEDCDSGFSALGCHALTIKGRQDIIIKGDET
                     YRIKIGRDQIIHTGFSFQGKRLNWTSYPDELFLGVPGITQHSENLSTRHYKRFFNGTF
                     IENCDVQEKMGAQFISVRNENDETLLRKKIGILPNDFSLEIKNGQQANEGSVIITTQH
                     PCLYSLKEKTLEVGRKRLPDSTEIMMKAEGIPPASISLQITPNLTANPIVIWLPFPAR
                     GCLAFDKDEKPLPKNLTINDLLGARAYLFGKNGEPTRYQLELRLRSRSGMQAWYEWHY
                     SAGECPVELTLYSLREHIDNLLSLEEGIDQTVDMRIKGGGSSFTWQIRRYKYSLDYDR
                     GRQILLANSISNRTGQIPSPVIMLLSEPERKVVLLTSRMSEGVPVGEFELSSIIQKNG
                     PWLVLPKPGEEASFRPCFIAGEPVIQSDATAIQSLQKATQLFNPRSDVNTIMLVLEQM
                     ASDPAHSGWQFLRNLYDQFGYLPLATFEVWRALVQHPQALAMSLFKFEMSIDYLSRIE
                     SEFPVFWEFLSITEVKRSATRFRAFLTHKGAPEEMQIRLLYRMYQQLGTTFPTYASEV
                     QLWLSQGKLPPVFPELTMKGIILEWYQELLREHGESRWPEFGGPGLLRWYMSQQNPVI
                     DISPDASYRYSVTLLPVFAAAVASGKTTFESVFENKPGAVFFLRQVRDFDSRWFNAIF
                     QYCLLRNVTEK"
     gene            18085..20622
                     /locus_tag="MOX77_001111"
     CDS             18085..20622
                     /locus_tag="MOX77_001111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015606369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HCA3356712.1"
                     /translation="MTTRYFSSLIEQSLSRSTEATLSIMGVTNPNLREHLTQQMAADC
                     GKEGSFLASPVFEQTFGWKESNSTMKDLATKQTLLSKEVVDSLDSEENGRYRFGSDWK
                     PFTHQLASWQSLLEKKHSVVVTSGTGSGKTECFMVPVLEDLYRELQVKNKKPLIGVRA
                     LFLYPLNALINSQRERLDAWTRSFGSGIRYCLYNGNTEELHALVKSEQANRPNEVLSR
                     EKMREEPAPILVTNGTMLEYMMVRQVDAPIIQKSKAEKSLRWIVLDEAHTYVGSQAAE
                     LALQLRRVMTAFGVTPDDVRFVATSATIAGSDAEKQLKKFLSELSGVPQERIDVLGGS
                     RVIPELEPCKQYSLSLDEIEHIPDSESEGISPERYSALTHSPEARCLREMLVSQPRPM
                     KLDTLTQRLNELTKHQYTQQDVLRWIDLCSGTLPNAKDPAFLKVRAHIFQRNTQGIWT
                     CVDKNCAAKKNTALEKNWSFGNVYVNQRQNCECGSPVFELAFCNECNEPHLLARDKKG
                     KLVQWDNKGGDEFSLQDEISDDFETSGEKIQKDFVFQSPQIIAAECNTEAGYIMQRLD
                     RQTRSIGVVNPDSIPLAINDIEQICSASNCGYKGGKGKQPFRRALLGGPFYVTNIVPT
                     VLEYCQDFTSDEGKDGVGPLSLPGRGRRLITFTDSRQGTARMAVRMQQEAERSRLRGS
                     VVEILGWHQRKQPTSAPNDQADVMKLVARVTQYREEAREYREWGMPEEAKLSEAQAER
                     LEQAIQTATGGKAATILVCRTWTEMVNDLKEKADIQGPILQYNHYLKPEIFTENGGPL
                     KLAEMLLFREFMRRPKRTNSLETQGLVQVGYQGLEKAGSQCSYSLAG"
     gene            20660..24409
                     /locus_tag="MOX77_001112"
     CDS             20660..24409
                     /locus_tag="MOX77_001112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010989315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1998 domain-containing protein"
                     /protein_id="HCA3356713.1"
                     /translation="MTLDFYVRESNYIQLDDDLRNWIGSRFSSKFVRNPDSKEPDDNQ
                     VKRWPQIRHGNVTQRLVKLLILGAKFNTVNTVTIDIVNAWLKEAWLQLTGSLAVLKPD
                     GNRFYLPKEHLTFSLVQKARICPVTNKLLATTFKGLTPYLPMHIQFERLTSAQYDAFL
                     AQEVTLPAIWEHDRSQDDYVDGLTKVRDWVSQDPQVLPLRSQNLWTDINDRVVEGGFY
                     YRTAEHSAQQSSERLQSYERMFKNGQLNVLNCSTTMEMGVDIGGISAVVMNNVPPHPA
                     NYLQRAGRAGRSKESRAISYTLCKGNPHDQQVFANPLWPFETVIPAPMVAMNSERLVQ
                     RHVNSLLLSEYLCHVVGETEKERTSLNSQWFFGEELDQSVCNRFKAWLERPTLSIDNA
                     LERLVKGTALHGVTAEKLRDKTQEAIAVLQTRWLGIFRDLVKQESESQPNTPYRRRLE
                     LEKKRHCGEYLLRDLAARTFLPGYGFPTDVVTFDNFTMEDYIREKTHKSRDKNDREDN
                     VSRYKGLPSRNLSVAIREYAPGAEIILDGRVFRSAGVSLHWHNLNADTNEAQRLDSAW
                     RCHKCGTLGYEEGIGGSGDLFCTNSACGERITLDNRRQVLQPAGFVTDAHTPVTNNIE
                     TMKFIPVVPAWVFVKAERVPLPNPLMGFMASGADGHVFQQSMGEGGHGYALCLSCGRA
                     ESMLNATDTPKSMEAHYPPRPGKSDRDSQNQRIICPGSTALNKNVTLGALARTDVFEL
                     ILRRPQNGEYIPDNSDEGRIVAMTLAVALRRALASVLGVSATELGYAVRPVRLDNEQS
                     VLAVQLYDIISGGAGFASSAPLHIEAVLKGMVKQLGCRHCDTACSECLLDSQTRHDHD
                     QLDRKAAQAWLGEDFSHYIGLPEAEKFSLADAQYCPGSIEDAIRRAINDGARKLTLWM
                     NGPLNEWDLYARQFRTAIQNYRLKDEVEVTLVVPGHIEDPELLQEIAQFAAIGMQLCQ
                     SELNTDTPVVAQVAFNDRLMMLISRSPEATIPGPNWHLNSQMVIRSHAFEPITLSKAE
                     LLSDAAGSRGLVNDIEIHKQLNGPVSQFGQRFWGVLTGAQEDIQTLLKENQVTRIHYS
                     DRYLQNPVALALLGGLLKPLKSILAQDAQVTIDTLFKSKERPGNKPFHDWMSEADFQD
                     FADQWFAASMGRAVVVNTVGSPRDIPHHRKLMVTFSNGQALKIRFDQGMGYWRIVFAR
                     AYRDFDFNDDVAFQLGNMAKACVEGQVVNSEESWATDVLVQVIVP"
     gene            complement(24520..25354)
                     /locus_tag="MOX77_001113"
                     /pseudo
     CDS             complement(24520..25354)
                     /locus_tag="MOX77_001113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611505.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            complement(25617..26462)
                     /locus_tag="MOX77_001114"
     CDS             complement(25617..26462)
                     /locus_tag="MOX77_001114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000490324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjiK family protein"
                     /protein_id="HCA3356714.1"
                     /translation="MFRYLCNQKAALLTAILLMAAGVLTLCFPESWYPQETEWQLTAE
                     KEITGIHGGLSGLTWNPDSRTLFAVTDHPSSVVELDTEGNVLRVIPSDGDHDFEAIEY
                     LGGNRYALSRERERTLTTHCIDSSTTVLPPATYSLTLDVNRHSDNAGFEGLAWGRGEH
                     ALMVAQEKKPLRLYVTDRSPDALSVSDSLTHRASLPWFLKDISGLHYDRNNGLLYVLS
                     HESAVVVVSDLDGGRKVMSLRRGHCGLRRDIPQAEGIASDDRDTLWIVSEPNLFYRFT
                     RTASS"
     gene            complement(26513..26659)
                     /locus_tag="MOX77_001115"
     CDS             complement(26513..26659)
                     /locus_tag="MOX77_001115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001141719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356715.1"
                     /translation="MPTDDKGTIQAGDIPPLRALILLLLTSVFISGFLTGVLAMLWLI
                     CRGA"
     gene            complement(26649..27185)
                     /locus_tag="MOX77_001116"
     CDS             complement(26649..27185)
                     /locus_tag="MOX77_001116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000752635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HCA3356716.1"
                     /translation="MADAPAEVELFFFYCPPCYAFSQTMGVARAIRHVLPHGDRMIKY
                     HVSLLGPLGHELTQAWALAMMMKETDVVEKAFFTADMVEKRLHSPDDVRRVFMSATGI
                     SRGEYDRSIKSPAVNDMVALQERLFKEYGVRGTPSVYVRGRYHINNAAFGAFSVEDFR
                     SRYAAVVRKLLAGNPDAD"
     gene            complement(27548..27898)
                     /locus_tag="MOX77_001117"
     CDS             complement(27548..27898)
                     /locus_tag="MOX77_001117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_490504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HCA3356717.1"
                     /translation="MASALTAFPEDGDISRIWYDRLCIEFNSDGGLSPAELRVIRLLL
                     QGYNCGQIAALCFRSVKTISAQKGLAFRRLGVRNDATLLPTLMLLGMVTLYTDLNRCH
                     SLEESGPECGSEAG"
     gene            complement(27883..28092)
                     /gene="pefI"
                     /locus_tag="MOX77_001118"
     CDS             complement(27883..28092)
                     /gene="pefI"
                     /locus_tag="MOX77_001118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_490505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator PefI"
                     /protein_id="HCA3356718.1"
                     /translation="MGESIITNIISIIRERQSTDNAPVKIRDIADAAGLSIYQVRSYL
                     EQLRAVGVLEKVNAGKGAPGLWRLL"
     gene            28839..29483
                     /locus_tag="MOX77_001119"
     CDS             28839..29483
                     /locus_tag="MOX77_001119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001706075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HCA3356719.1"
                     /translation="MDDIESFDIITLPDELLSRVLCLFEASNCSESLSPIRYRTFSDK
                     VFIITDSGINGILFEYLKKRKNNNNDIYEIACLFSKVNNIEQLYTSLCISVSRSFSDI
                     VRKTIDNDISTKWRLKTLSEKLNLSEVTIRKKLENENTNFYRILLDARMQKAARLVLD
                     SDTHINKVSYAVGMSSVSYFIKLFSDYYGLTPKQFHLKYKHRNTGEKAVFMLYN"
     gene            complement(29517..29962)
                     /gene="sefD"
                     /locus_tag="MOX77_001120"
                     /pseudo
     CDS             complement(29517..29962)
                     /gene="sefD"
                     /locus_tag="MOX77_001120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001077813.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SEF18 fimbria major subunit SefD"
     gene            complement(29959..32451)
                     /gene="sefC"
                     /locus_tag="MOX77_001121"
     CDS             complement(29959..32451)
                     /gene="sefC"
                     /locus_tag="MOX77_001121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016505863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SEF14/SEF18 fimbria usher protein SefC"
                     /protein_id="HCA3356720.1"
                     /translation="MKKTTITLFVLTSVFHSGNVFSRQYNFDYGSLSLPPGENASFLS
                     VETLPGNYVVDVYLNNQLKETTELYFKSMTQTLEPCLTKEKLIKYGIAIQELHGLQFD
                     NEQCVLLEHSPLKYTYNAANQSLLLNAPSKILSPIDSEIADENIWDDGINAFLLNYRA
                     NYLHSKVGGEDSYFGQIQLGFNFGPWRLRNLSSWQNLSSEKKFESAYIYAERGLKKIK
                     SKLTVGDKYTSADLFDSVPFRGFSLNKDESMIPFSQRTYYPTIRGIAKTNATVEVRQN
                     GYLIYSTSVPPGQFEIGREQIADLGVGVGVGVGVGVGVGVGVGVGVLDVSIYEKNGQV
                     QNYTVPYSTPVLSLPDGYSKYSVTIGRYREVNNDYIDPVFFEGTYIYGLPYGFTLFGG
                     VQWANIYNSYAIGASKDIGEYGALSFDWKTSVSKTDTSNENGHAYGIRYNKNIAQTNT
                     EVSLASHYYYSKNYRTFSEAIHSSEHDEFYDKNKKSTTSMLLSQALGSLGSVNLSYNY
                     DKYWKHEGKKSIIASYGKNLNGVSLSLSYTKSTSKISEENEDLFSFLLSVPLQKLTNH
                     EMYATYQNSSSSKHDMNHDLGITGVAFDSQLTWQARGQIEDKSKNQKATFLNASWRGT
                     YGEIGANYSHNEINRDIGMNVSGGVIAHSSGITFGQSISDTAALVEAKGVSGAKVLGL
                     PGVRTDFRGYTISSYLTPYMNNFISIDPTTLPINTDIRQTDIQVVPTEGAIVKAVYKT
                     SVGTNALIRITRTNGKPLALSTVLSLKNNDGVIQSTSIVGEDGQAYVSGLSGVQKLIA
                     SWGNKPSDTCTVFYSLPDKNKGQISFLNGVCK"
     gene            complement(32456..33208)
                     /gene="sefB"
                     /locus_tag="MOX77_001122"
     CDS             complement(32456..33208)
                     /gene="sefB"
                     /locus_tag="MOX77_001122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001772663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SEF14/SEF18 fimbria chaperone SefB"
                     /protein_id="HCA3356721.1"
                     /translation="MYILNKCIRITVIFFFFCYLPIASSESKKIEQPLLTQKYYGLRL
                     GTTRVIYKEDAPSTSFWIMNEKEYPILVQTQVYNDDKSSKAPFIVTPPILKVESNART
                     RLKVIPTSNLFNKNEESLYWLCVKGVPPLNDNESNNKNNITTNLNVNVVTNSCIKLIY
                     RPKTIDLTTMEIADKLKLERKGNSIVIKNPTSSYVNIANIKSGNLSFNIPNGYIEPFG
                     YAQLPGGVHSKITLTILDDNGAEIIRDYYFKV"
     gene            complement(33330..33826)
                     /gene="sefA"
                     /locus_tag="MOX77_001123"
                     /pseudo
     CDS             complement(33330..33826)
                     /gene="sefA"
                     /locus_tag="MOX77_001123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001674837.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SEF14 fimbria major subunit SefA"
     gene            34181..35330
                     /locus_tag="MOX77_001124"
                     /pseudo
     CDS             34181..35330
                     /locus_tag="MOX77_001124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477168.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            complement(35362..35502)
                     /locus_tag="MOX77_001125"
                     /pseudo
     CDS             complement(35362..35502)
                     /locus_tag="MOX77_001125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008322911.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4102 domain-containing protein"
     gene            complement(36239..>37941)
                     /locus_tag="MOX77_001126"
     CDS             complement(36239..>37941)
                     /locus_tag="MOX77_001126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005224853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="toprim domain-containing protein"
                     /protein_id="HCA3356722.1"
                     /translation="VAEGYATALTVHHLTGETVMVALSSVNLLSLASLARQKHPACQI
                     VLAADRDLNGNGQSKAAAAADACEGIVALPPVFGDWNDAFMQKGEEATRKAIYDAIRP
                     PADSPFTTMSEAEFTAMSTSEKAMRVHEHYGEALAVDANGQLLSRYEAGIWKIIPPSD
                     FARDVAGLFQRLRAPFSSGKIASVVETLKLIIPQQDAPARRLIGFRNGVLDTATGTFS
                     PHHKSHWLRTLCDVDFTSPVEGETLETHAPHFWRWLDRAAGGKPEKRDVILAALFMVL
                     ANRYDWQLFLEVTGPGGSGKSILAEIATMLAGEDNATSATIETLESPRERAALIGFSL
                     IRLPDQEKWSGDGAGLKAITGGDAVSVDPKYKDAYSTHIPAVILAVNNNPMRFTDRSG
                     GVSRRRVIIHFPEQIAPEERDPQLRDKIARELAIIVRQLMQKFSDPMTARTLLQSQQN
                     SDEALSIKRDADPTFDFCGYLEMLPQTNGMFMGNASIIPRNYRKYLYHAYLAYMEANG
                     YRNVLSLKMFGLGLPMMLKEYGLNYEKRHTKQGIQTNLSLKEESYGDWLPKCEEPAAT
                     "
BASE COUNT        10158 a         9101 c         8810 g         9872 t
ORIGIN      
        1 tcattggcgt gaaatgcgca gtctccgacc accgttccgc cgcgcccggc gggaatcaac
       61 tcaccagcat ggcagccgaa tcacgcgttg gcggcctgct gggcggcaaa cccggtgtca
      121 gcgtttttca tatgggcagc agcaaaaaag ggttacagcc gctgtatgac atcctggaaa
      181 acagcgacgt gccgatcggt aaactgctgc ctacccacgt caaccgtagc gaatcgcttt
      241 tcgagcaggc gctggcgttt gcgcttaaag gcggcgtgat cgacattacc accagtatcc
      301 cggatcccgt cgcgccggcg gagggcattg ccagagcggt aaaagccggc gtcccgcttt
      361 cccgggtgac gctcagttca gacggcaacg gcagccagcc gctatttgac gctgccggaa
      421 atctgacggg tatcggcgtc gcgggcttcg aaagtttgct ggagacgttg cagacgctgg
      481 ttaaccacta cggattcagc ctgaccgatg ctctgcgtcc gctgacaacc agcgtagccg
      541 ccttcctcag tctggacggc aaaggcgaaa tccgtcccgg taacgatgcg gatctgctcg
      601 tctttagcgc agatttacgc attgagcagg tgtatgcgcg cggcaaacgc atggtcaatg
      661 aggggaaagc ctgcgtaaaa ggtacctttg aaccggcgta attcccgcta gtttcagact
      721 gccccatcac ggcattctga aagaggacgg gataagtggt tgtcagccgc ccgaatggac
      781 gtagaatgcc ccttcggacg gctgacagga taacggtaaa tggatgtaac tggagcaggt
      841 ttgcacaata ttgagacaaa atggctatat gattttctga cgctggaaaa gtgccgcaat
      901 ttctctcagg ccgccattat ccgcaacgta tcgcaacccg cttttagccg gcggattcgc
      961 gccctggaac atgccgtggg cgttgaactg tttaaccgac aggtctcgcc gctacagctt
     1021 tccgaacagg gtaaaatctt tcactcccag gttcgccacc tgttacagca gctggaaagt
     1081 aatctgaccg aactgcgcgg cggcagcgat tatacgctgc gtaaaatcaa gattgccgcc
     1141 gcccactcgc tctccctcgg cctgttaccg accatcgtta agcagatgcc gacgcagttt
     1201 acctacgccg ttgaggcgat agatgtcgac caggcggtgg atatgttacg tgaggggcaa
     1261 agcgatttta tcttttccta tcacgatgaa aacctgcaac aagcgccgtt tgataatatc
     1321 cgcctgtttg agtcgagact gtttccggtt tgcgccaaca atggccgggg cgagccgcgc
     1381 tatacgcttg agcagccgca ctttcccctg cttaattaca gtcaaaactc ctatatgggc
     1441 cggctgataa atcgtaccct gactcgccat gctgaactga gtttcagtac atttttcgtc
     1501 tcttcgatga gtgaattgtt aaaacaggtt gcgatggacg gctgcggaat cgcctggtta
     1561 cccgagtatg ctatccgtca ggagattacc gacgggcgcc tgatagtgct tgatgccgac
     1621 gaactggtta tcccgatcca ggcttatgct tatcgcatga atacccgcat gagtcaggta
     1681 gccgaaacat tttggcgcga cctgcgtggg cttcaggccg cgctgtaaac acatcaggcg
     1741 gtaaggcgtt gttccccggt caaagaggcg cgggtgtctg gccaggactc ataccaacga
     1801 atcgccgcgc gcaccagcga cgctgtggaa tcaatcatcg ggcacgctat cgcgcgttca
     1861 tgtccggcca caataagcgg aatttcggta caccccataa taattgcctg agcgccacgg
     1921 gcaataaggc tatcgatttg cggcagcagc agcgcttgcg ccgcagtttt atcgccacgt
     1981 ttaagcgtat aaatagcctg cattaccaac gcctgccccg cgtcttctgg ctgaattaac
     2041 gtcagccccc gcgccagcgc tttcttttga tataacccgg ttgccagcgt cgcattggtc
     2101 gccagcagac caacgtgccg cgccgatggc ggaatatccc ccagggtggc gtccaggatg
     2161 ctgatcattc gcgctttcgc gacgttctgt aaatcatcaa accaataatg cgcagtgttg
     2221 catgggataa cgatacactc cgccccggcg tcttccagca tatgcagata acgctccaga
     2281 taacggtatg gcgaaggccc gccggataac agacatgctg tacgatcggg aatatcaggg
     2341 atagagctga caatgagcgg gatgtgttgt tgatcacaac tgacatgtcg caattcaaca
     2401 aatttttcca acatatccgc cgttgccgca ggtcccatcc cccccagtat cccaatggtg
     2461 tgtttcatcg cttttcccgc ttatttacgt caaggtcaga aacacactat caacttgatg
     2521 tgtatataaa aaatgccgtt ttattagcgg ctatgcgtaa aaatcataac gggtgtaagg
     2581 gccatgcgtt atcgcctttt caggcaatcg attggttaca tgagcgctca tcagccttcg
     2641 caagccgcta aatgccattt cgctatacag catcgcccac tgcgagtccg caagcttgtt
     2701 ttgtcctcat cgccacagcg cctgtcggtg aaggggccgc cgtgttttgc ttttcgacgc
     2761 caatgcggga atatcccagc gaatatggct ataaaccaaa tccacggtct ccgtggcgct
     2821 gccttcggcg tcgccatgat tgctcatgcg tgaaattcgc acattggtga gcgtataaat
     2881 aataaatggc agcattgcgc ccttatcact acggcataat gtcagcacgc cttctttcac
     2941 cgttttcccg ttacaatagt gctcatagag gccaagcgta gcaagatcga ctggctttgt
     3001 cagcgtcaac cctccaatat atgtccctct cgcttcgccg gactcccgtt tcgtcgggtt
     3061 gtggttgtaa gcaataagtt ttatttggtt ttcaaaacct ttgatctggc tttcgccttc
     3121 aataccgtcc agttttaaat agatggcgtc catcccccct ccgtgattat catgcggcaa
     3181 agcaggctga caaggacgga acgccaacaa tgaaagaacg ttccattttc cagccatttc
     3241 gttggtgtct ctgtatacca gattaaatac cgacaatctg ctataactgg attcttgcta
     3301 aataccttct gccatcaaca atccatttta caatagcgct actgacctga aatctattac
     3361 gcctggcatt caagcatcgt ttcctgaata accatagccg ctataagaac catatcaaaa
     3421 aagaaatatc aatatcattt cttattttta tccgagaaat tacttaattc cacagaatcg
     3481 gaatgtagac aattcttatt ccttttcaca tcaatgggtt ttttagactt ttgtcatatc
     3541 gaaaacaacc attccaatag aacatattta ctatgtaaat atatttaatg tttttatcgc
     3601 gcgcagtgtt atcacagtaa taaatgactt gcatcaaaaa tgcgcctttc agcgccacgt
     3661 atttttgggc agcaaattat aaaatcgcgt ttcaaagtca gtgacatgtt ctctgtgcag
     3721 gcgatatgac tttatgcccg gacgacacgc cagccgcttt acccttacgt ttagtcgtga
     3781 tacgttagac cacatgaaca cgaaacgatc caacgctacg caacgtcatc tccgctggtg
     3841 gctgccttcc tgaaggcggc acggatcact atcccttttt aagtagccgc cgaaaggcgg
     3901 ctactgcgtt tcgggacgtc tttcggcttt acagtaagca taaaggagtc cttaatgaac
     3961 acccttccta tcattctgac tggcgatcgc cccaccggct cgctgcacct cggccattat
     4021 gtcggttcac tgcgccagcg cgtcgcgcta cagcaggatc accaacagta tgtcctgatt
     4081 gctgacctgc agggactcac cgataacggc agtaatccgc aaaaaatccg cgataatatt
     4141 ccgcaagtgt tagctgacta tctggccgtc ggcatcgatc ccgcgctaac gacgatctgc
     4201 ctgcaatccg cattacccgc cctcgctgaa ttaacggtgc tgtatatgaa tattgttacc
     4261 gtcgcccgag tggagcgtaa tcctacggta aaaaatgaga ttgcccaaaa aggctttacc
     4321 cgttccctgc cggtcgggtt catggcgtat cccattagcc aggcggcaga tatcaccgcc
     4381 tttaaggccg aaatggtacc ggttggcgac gaccaattgc ccatgattga gcaaacgaat
     4441 gagatcgttc ataagatgaa tagtcttttc tcctcgccgg tattgcgacc ctgtcaggcg
     4501 ctcctgagcg atacgggccg tctgccaggc attgacggca gcgccaagat gtcgaaatcg
     4561 ctcgtcaata ccctgcttct ttccgccagc gaagaaacca tccaccgtgc ggtcagcgcg
     4621 atgtacaccg atcccaatca tttaaaaatt agcgatccgg gaaaaataga aggtaacgtc
     4681 gtctttacgt ggctggatgc gttccatccg gataaagcca aagtcgcggc gatgaaagca
     4741 cattatcaac aaggcggatt aggcgatcgt gtctgtaaaa atgagctgga gacctgcctg
     4801 caagaactga tcgcgccaat acgcgaacga cgggcaacct ttattgcaga taagggaatg
     4861 ctaatggaat tactgaaaaa aggtagcgag cgggcgcatg aggtcactca aaagacgcta
     4921 caggaagtaa aacgtggact gggtctgccc acgctattcc aggtataatc aggcatcaac
     4981 gttgtccagc ggccatgact caaacagata gccatcaaag tagatgtcat caacattgga
     5041 aaactccagc agacgctgct tcacgttttc caggtgctgc cacatcgcca gcttcgctgc
     5101 gcgggcgtct ttcttaatta acgccgcgag gatctgctta tgatcgccca gccactcctt
     5161 acggtaaagc gtatcgccca gatggctatg aagctggagc cacatcggat tattttcacg
     5221 ccattgccag gactgacgga agagctcgac caacatactg ttatgggtcg cttcggcaat
     5281 ggccagatga aactgcatat cgccgctttc tgagccgccc ggcgcgctgg aggcgagttc
     5341 tcgctcttcc agttgtaacg cctggcgcat tttaatgatg tcctcgcggg tggcctgcag
     5401 agcggcaaat tcagcgatat tactttccag caactgacgc gcctgtaaca gttcaaacgg
     5461 cccggcgtca ttacagtgat tgacgtcagc gccttccatc tcgttattat ccgcgctgtc
     5521 gagcacgtag atcccggcgc cgcggcggac ttcaaccaga cctttaattt ccagcatgat
     5581 cagcgcttca cgcacgacgg tacgcgtcac attgagcctc tcagcgatct ctctttccgg
     5641 cggcaagcgc tccccggggc ggtacggcgt ctgcacaatc agatcccgta tcattgcgcc
     5701 cacttcctgg taaggtcttt gctgagaagt gtttgatttc atattggtcg tgcccgtccg
     5761 atgcgatttc ccggtatcag actatagcat ttgtaaagag ggatagcacg cgtagcacac
     5821 caaaaacgcg aaactggtca accaacaaaa caataatgcg ccccgtttcg ttagtgaagc
     5881 cagatgaaag gaaaggcagt agacaataca cgactgatgt tccaccttta gccctgatgc
     5941 ctgaatatga acaacatatt ggtttaccaa tataaaattt atcaaccaaa aattacgcca
     6001 taaaatgtgt ctgtacattg acaggaacaa cgcctctgac atagcgtgat cggcgaaaat
     6061 ccagccgctc tctttgtatc aagaacgcgt tatgataaaa gacacagtgt ttttcgcccc
     6121 aagcgtatcc gggggaagca acgcctccag tttgtcgagc cgccatcgcc gggcagcgat
     6181 tattctgcat gaaatttatg gtattaacgc tcatatccaa cgcgcaggcc atgaatggat
     6241 gacgcgcgga ttcgacatct atattcccgc gctgtttcct caccataccc cctttcgcta
     6301 tgaacagcag gaggaggctt accgtcactt ttcagcaaat gtcggctttg atcccgccgt
     6361 cgttaccacg ttactccacg atctcagagc gcagtacgag acgttaatcg tcgtaggata
     6421 tagcgtcggc gcaacgctcg catggctaag tgcagccagt gggttatgcg atggcgtcat
     6481 ttgctattac ggttcccgta tacgccagta ccttcatctt gcgcctctct gtccggcact
     6541 ggttattatc gcgcgttatg agccggcgtt tgatccccgc gccatgcgac agacgctgga
     6601 aaagcgcccc cgggtgcagt gtaaaatgta cgatgcgcgg cacgggttct gtgatgctga
     6661 tagcgccacc ttcgatgccg ccttatctca tcaggtaatg gacgatgtga gcgcatttat
     6721 tcgcgacatc acttgtgcaa acacatcgcc cgattgaagc ctgattttca gctttagtgg
     6781 agactttttt caacgagctg ttccagtttt ttcaaagcct gtatgtctgc ggcatcaaga
     6841 ccataacgtt gcagcgtttc agcggggtga taactgacta acgttcgccc atcggcttgc
     6901 tggctaatga gcacccgaaa cggtaaatcc agcgccagtt cgggatgcgc cagcatgaga
     6961 ggcgttccgc ctttaggatt gccaaagacc agaaccgttg tcggcggcat tttcaggtta
     7021 acattctgtg ccgctctggc atggtcaaat tccccaaata acaccagacc gtgatcggcg
     7081 acagcgtgca tcaaccgcgc tcgggtctgc aaatagtcat aagcgctgta ggttttaacc
     7141 atggttatcg ctccatcctc cgttgcaaag ccaggcctta ttaagattaa catcagggtt
     7201 accgccgata aaaaaggctt taaaatagta ctcattcttc tctctccctg acccaatacc
     7261 catgagtaaa tgcgacacag atgatatgcg gtttaaaaat cagtcatcgt actgtacccc
     7321 ttattattgc actgaacagc tcatcactaa aaaaacagac ggcagaacaa aaaattccga
     7381 cgtctgaaca aatttaaata acgatgatcc aatctgactg agcgacagcg cgatcattat
     7441 tatgattatg gcgcgacacc atcctcttca gcccgctggg taagaaaaaa tatactccgc
     7501 tcagtaagat aataaatact acaggccaac tcttcagaga tacggagcat cattgcgtgg
     7561 tgatgatgcg acttttctgg cgccatcggc agaaatattt ctgactccag cacgtcaatt
     7621 aaaaaatgaa atttatgtac atattcagca gatataacgc ctctcgccat cagattagcc
     7681 attagtgtat ttaaactatc ttgttcatga tatacgatac tttttctctc atgaattctg
     7741 aggagaacgc ttctgaagac tgcatgacat tcccttacga cacaggcaaa atcattaagc
     7801 atcaggcgat tatacgcttc cataagatca tattcgacaa agccatactc tccaggagag
     7861 tacaaataat aacatatgtt tttaagccgt tttattctgc gcaaccttac aattctacca
     7921 ttttcatatc gatattttaa actatgctca tgaaatatat tatttaattc actaatcgcc
     7981 ttatctggtt ctaacccaag cgtaacttcg taggtccgaa ggtaggtatc tatatagtta
     8041 aaagcaagct caatggtatc aatatgcttt cttttatcat ctgtttttaa taacagatta
     8101 ctcatttcat ccagatatga cgttgaatgc gcatataagg tgaataagcc atactctttg
     8161 cgcaacgttt tacatattct tcgataaact tcgtcagaat gactattatg atagcagtat
     8221 aatgtcatat cataaaaaga ggagcaattc cctaatgtat taataatcaa taagattatt
     8281 tgctcgcgta tttctaacgg aatatcttca tataacagat cgctatgcct tagtaagtat
     8341 ggtctaaagg tgtgcattcc tccccctgta accgcaacag aaaaaattac gctatgaata
     8401 gcgccacatt actctaattc agtggttcag gtattaatat cagctcaaca gtgagccatt
     8461 tcttcttatt ttttaatggt gttgcgtgaa tatttattta ctctacagat aaagataatt
     8521 gtaacccatc gccctttgtc attctgctga tcatcactgg tgcgaaaacg tctggattat
     8581 ccgtggcgat tcagtcttca ctgaatgcca cagacaagcg ttattcaact aaagctcacc
     8641 tgtcccttag tccttctttc attccgttgc gtcgttgcca taccagcaca cttaaacgta
     8701 aggtgagctt attgttttta tcgacgggtc agaacaatcc ttcgccggtc atacagtgtt
     8761 tcaacagaga gctgcaaatc atatttcgca ttcttcagtt ttcgcgattt aagcattttc
     8821 atcgtgacgc cacttatttg ccctgtttca atccgtctct tgatttcggc tgcgcttagc
     8881 aggagttgct tcttcaaaat cgacagcagg ctgacctgaa aagaacggga aatcctgacg
     8941 ctaacactga cctgcttgtg ggaggcgata ctgaccagcc accgttcctg aatgtgaaaa
     9001 tcaggctgcc ccgataattc agcattgttt cgcttcagga tcgcgttgtc ataagcaaaa
     9061 tattgcaccg tggcagcatc attcgccatc agccggcaat aaagattgcg gttaattttg
     9121 ctgactggca ggcgcgagaa cagggagata ttccaggtgt aatcgcagtg tgtgcattta
     9181 tagatactcc agacatcgag taccttcttt tgcgaattaa cccgaaatgc cccagaaggc
     9241 gtgaagtccc gttttacgct gcatgaaggg caacgtttcg ctatgcgctg ataccccaca
     9301 ggagtgacag tccatatgac tttcataacg tacctttttt aacccataca aaaccggatc
     9361 cgaactcagc ggaccataaa tgtttgtgta tgaaaaatat ttaagtgata tttttcagcg
     9421 ggttaaaaaa agatttccaa cgctacaacc ctgtcaacgg ccaaaagata cgtcgagact
     9481 atcaaagcgg ccattatcgg gtatatgagt ttaatcaata ttcattatgg taattgcggg
     9541 agctattcat ctgatacgct aaacgtcatg agcctccctt tgagatcaca cttttcactc
     9601 ccggttattc acttacagaa atcaggtgtt atcattcact acgtaaatac ctttcaactc
     9661 aacccgaggc tttgatgctg gagaatgtca tcatctgata atcagttacc cgaccttttc
     9721 aggccggact gattatcaat gcgccgaaat cgaatgcgga caccgcagtg tgtttgcacg
     9781 ttttgcctat gatgattaaa caggttcttc agtatgaatt tatcccgtca ggaacaacgt
     9841 accttacacg ttctcgccaa aggcggacgc attacgcaca tccgcgatgc gtcaggccgc
     9901 gtcaccgccg ttgagtgcta tagccgcgaa gggttgttgc tcgccgattg cacgctcgct
     9961 gtattcaaaa aactcaaaac caaaaagctg atcaaatccg ttaacggtca gccctaccgc
    10021 attaatacaa ccgggctgaa caacgttcgc gcccagcctg acaatcgcta aggagatgat
    10081 gatggatatc agcgccgtta tttttgcaac gcatcgcatt cggctattac ccgatgaagg
    10141 caaaatcccc tgggacgagc cagccttcag ccaacgcatg ctggaaaatc atctgtcaca
    10201 ggatcacgac tgggccagcc gccggctaac cgtgattgag caacaggtaa catggattac
    10261 ccgtcagtta cccgcaggcg cccgcattct ggatctcggc tgtggccccg gtttttatac
    10321 ccgcctgtta gcagagcgtg ggtttcactg cacaggcgta gatttctctc cggcatccat
    10381 cacatgggct cgccagcagg cgcaagccgc aaacctgaat attgactaca ttcagcagga
    10441 tattcgtaca taccacccca cggaaccctt tgatttcatt atgatgacgt ttggggaact
    10501 gaatgtcttt agcgctgctg atgcgcaaag cctcatcagt cattgcgcgc agtggttgaa
    10561 accggacggc aaactgcttg ttgaagtgca taccttcgat gaagttaaac gccagggcat
    10621 ggcgcagcca ggctggcagc gttgtccgca cggcctgttt cttgccgtgc ctcatctgct
    10681 gttaacggaa aatgcctggg atgaagaggc ccaaaccagc tcaacgcagt tctgggcgat
    10741 agcggaaaac ggctgtacca cccgtttcgg cagtcaaatg aaggcctggc gcgatgatga
    10801 atatatcagc ctgcttggtg atgctggctt cactgtgttg cagcgcccgg acagtcacac
    10861 ctggccggtc ggcgagactt ttgcaggcaa gctgtttgcg ctgctggctg aaaaagcatc
    10921 cacttctgag ggtattgccc tcagtaaaag gaataaccca atggatatcc cacgtatttt
    10981 taccattagc gaaagcgaac accgtatcca taatccgttt acagcggaaa agtacgccac
    11041 gctgggccat gcgttacgca tgaaaccagg catgcggatt ctcgatctcg gtagcggttc
    11101 gggtgagatg ctctgcacct gggctcgcga ttacggtgtt acaggtactg gcattgacat
    11161 aagcccgctc ttcaccacac aggcaaaaca acgtgcagaa gagctcggcg tcagtgaata
    11221 cgtacatttt attcataacg acgcggccgg ttatatcgac gaggaaaaat atgacgtggc
    11281 ggcctgcgta ggcgctacct ggattgcggg cggtgtcgcg gggacaatag atctgctggc
    11341 caaaagcctc aaacctggcg ggatcattct catcggtaaa ccgtactggc gtcagatccc
    11401 cgcaacggaa gagatcgccc acgcctgtgg cgtctcatcc gtcgccgatt ttcgccccct
    11461 gcccgagctg gtcgcctttt tcgaccaact cggctatgac gtagtggaaa tggtgctggc
    11521 ggacccgcaa ggctgggaca gatatgaagc cgctaagtgg atgaccatgc gccgctggct
    11581 ggaggaaaac cctgacgatg agtttgcgca agaggttcga acagaactga cggcagcccc
    11641 caaacgtcac gtcacctgga cgcgagaata ctttggctgg ggcgtatttg cgttaatcgc
    11701 gcgataacgt gaagcaggag gtatacccta caagaggtat acctccattt aaaagtattc
    11761 aacaaattaa cacggctcaa ggcgggaata tatcgtctta atttcgccat taagtttctg
    11821 ccacaatatg tcgcaagacg tgcaagcgtt ccacctcacc tgatgagcga aaccaccatc
    11881 aataagacgt tattgctgcg attcaattat taagaataaa aaaagaacca gaagaaaatt
    11941 aaaaaatgac ttacccacca tattagccat tgttaaaatc aaagtacccc cctcgtaaaa
    12001 gctggatgta tttatttctc atagacgaga atttatatat tatgatataa tacggtagaa
    12061 aaatatgcag gttattaacc tgccattaat gtaaataatt ctttgaggag atgtttccag
    12121 tgggacgtaa atgggcaaat attgttgcta aaaaaacggc taaagacggt gcaacgtcta
    12181 aagtatatgc aaaatttggt gtagaaatct atgctgcggc taaacaaggt gaaccagacc
    12241 cggaatcaaa ctcagcttta aaattcgtta ttgaacgtgc gaaacaagca caggttccaa
    12301 aacatgttat tgataaagcc attgataaag ccaaaggtgg cggagatgaa acgttcgtgc
    12361 aagggcgtta tgaaggcttt ggacccaatg gttcaatggt tatcgctgaa acgttgacgt
    12421 ctaatgttaa ccgtacgatt gctaatatcc gcacaatttt taataaaaaa ggcgggaata
    12481 tcggagctgc aggtgctgtc agctatatgt ttgacaatac tggagtgatt gtatttaaag
    12541 gaacagaccc tgaccatatt tttgaaattt tgcttgatgc tgaagttgat gttcgtgatg
    12601 taaccgaaga agaaggaaac atcgttattt atactgaagc tacagacctg cacaaaggaa
    12661 ttgcagcgct aaaagccgct ggaattactg aattttcaac aacagaatta gaaatgattg
    12721 ctcaatcaga cgttgaactt tcaccagaag atttagaaat ctttgaagga cttgttgatg
    12781 cccttgaaga tgatgatgat gtgcaaaaag tatatcataa cgttgcaaac ctctaattat
    12841 aaattaaaca aatctgtctc tatggcagat ttgtttaatt tataaagctg ttataaaaaa
    12901 gtctatctgg ccagatatat aagtttttaa atttatgttt attagttgcc acttgatctg
    12961 acacatagcc ttgaaaggtt gagagctacc ggttttgata tggtgttgaa tccttatata
    13021 aaacatgagg taattctcat gcttcatacg acgaatcccg tcagcaagat aagcaaaagc
    13081 cagcaatatc gggctactta caatctccct gtgctcttta agatgccgcg cctcataaat
    13141 tccgcttgcg ctcatgatgg ctcatctggc gctctacgcg tcgcctgact acaggtgtga
    13201 ctccaccagc gcgctacaga ccatagtgcg agaaccgtgg ccgattactt cgatgctttt
    13261 gatgtggagc tatttttaac agataacgta taccacactc aaaatactcc cccagatcaa
    13321 tgctctcctc tgaacacctc tttcctatgc cattccacaa accgctcacc cggataattt
    13381 tctttaaccg ggggcaacgc gatctctttc cccgcaaaat cccagaacaa ccgctgtacc
    13441 actccgccac cattcaccgc gtcggaaacc actacgcgca tattttcatc caggccaatc
    13501 gaaccacgat cgaacgcttt atgatggatt gcgcacaacg ccaggccatt aggtacttca
    13561 caaggaccat gatgctgctt ccatctgata tgggctgctt caagggctat aggggcgttg
    13621 tcgtggcgca tattgaagcc gcagaccgca cattgataat tgtaagctcg tagcaccgcc
    13681 tggcgaaact tcggatcgcg ttgacggaaa gaggtgcgaa tatcaaaacc catctcgtca
    13741 gcgatgtctt cctgaatact ggtcggaaaa tgcgcctcaa ggatctgctg cgccagcgtg
    13801 tcgattagct tacgtttttt tgttaccagc gcgaaattga cggcatcaaa cccaccagca
    13861 acattatatt caatgagttc acgtttaggt ggctggcggc taccgctggt tgagcagaat
    13921 tccgcgtttt gcaattccca gaaaccatcg cccttcagac gccagaacgg catatccggg
    13981 cgctgttcac ggcgctgtgg cccatagcgc tccagcaaat ccagcaattg ctcatgaatt
    14041 tcagaaccat aatcaaacag acgatcgtga ccctgccgat agtgcgagag aacatataac
    14101 agcaataacg gcttatgcgg cgctcgctgt tcgcctttgc gccaaatagt aatatttgat
    14161 atcgcttgct ttagggtttt gtcagaggtc attacattga agaattcatg agcacatagt
    14221 tgcgatgatg ctctcccagt ggatcatggt gcgggcggcg agctgtgcat caccctttcg
    14281 cgtcctcaag ataacgggcg gcaagcattt cagcggattc gatgcctgcg ataccactga
    14341 ctgctttgtc gtagagccaa ccgatgatgg actggaaaga gcgcgggtgg tgggatggag
    14401 ggaggtcgtc agcgctttcg tcgtcctcgt cttcgtagtt ttggtattcg ttattcagct
    14461 ccatatcact cctttgtagg caggcaggta aaaagaaggc cggaaccatc gtaaagacgg
    14521 ttccggccgg aggttcaatg ggatgatatg gggttgaaaa gatttgtagc tacaaatcat
    14581 ctccttacag attaaaacaa atggcgagta gcccctccgt ataataaact taacttattg
    14641 attaaaatca aactaatatc aatttcaaat ttaattaaat tcataattca attattgtta
    14701 tctgtttttt caaaataaca aaaagttata ataactttca gccattcact gttctaatgc
    14761 aaggagcttg ctttgagtca gtccgaatac gcatccattc taaagtgtac cccatggcta
    14821 gctaaattcc tcacccgcag aggattgaag caaccagacc atcgtccgtt atatgaatac
    14881 cacgcaacga gtgaagaata tgatgaattg aaacggctgc tgcgagctat aggggtaccc
    14941 gatggttata aaagtgataa agggtacgca gcctgtttca cattgttctg ctcagagtgg
    15001 tatcgaagag attatgaaag agagtatgga tgggcatggg agccaattta caagacgata
    15061 ggtatctcag catcttcctc gaaaatgggg aaaattatcc ctaaaggcct ggatggttac
    15121 tgggggcgtc cagtgcggtt ttatgacaca gaaaggcgga atttcttagg ctccttattc
    15181 agtgaaggcg gtctaccttt caggttgcta aaggaatcta atagccgttt tcagtcgatg
    15241 ttttctctca ttctaaatca atacgatcag gctaaatctt ctaacatttc cacgttcgcg
    15301 ttagtccatg cagcggtaga aaaatcatcc ctgccagtcg ttttcaaaga ggatacttca
    15361 gttgagctta ttagtcggat ggctgaacag ttagtatctc ttgttcaaat ttatgattta
    15421 agtaatcata ccgaacccgt aaaagaactt gaacgtgttc atcctaagtg gcgtgacagt
    15481 ttccctgtcc ctctcgatga tgatacgggt accagtttcc ttaatggact tttacgaaca
    15541 gcttctactg aatcaaaacc ccgccttcaa aagaataaaa ccactctctg tcagttttta
    15601 tggtcagaaa atcatcctga agccctccag gcactcattt ctctgcctga agaactgagt
    15661 ttttcaattg atattgagcc ttcaacaacg cgcttcgagc ttgctatcta tgaagatggt
    15721 aacgaaatcg caagtctggg acctgcatat gcaacgctaa gtaactccca ggcaaaaata
    15781 aaagttcgta agcgcgagat taaattttac cgaagaaatc ccacggtcag tttgtttatt
    15841 gtggcgagag ctgggggtat gtttttcggc tccaatcttt tagaaggcag tgaagttgcg
    15901 gttggcgatg ttccattggt ttttgtttct gataaaaatg aatggctgtt acagggacaa
    15961 gcctcttgca gcgtacgtgg cagccatgta cttattgtgc tgccaaagga tggctgtctg
    16021 gcttcagaac atgaggattg tgactctggc ttttcggctt tgggatgcca tgctctgacc
    16081 atcaaaggtc gccaggatat catcattaaa ggcgatgaaa cgtaccggat aaagatagga
    16141 agagatcaga ttatccatac tggattctct ttccagggga agcgattaaa ttggacaagt
    16201 tatccggatg aactcttcct cggtgttcct ggaattactc aacattctga gaatctatca
    16261 acgcgccatt acaagcgttt tttcaacgga acatttatag aaaattgtga tgtacaagaa
    16321 aaaatgggag cacagtttat ttcggtgcgt aacgaaaatg atgaaacgtt actgcgtaag
    16381 aaaattggca ttctccccaa tgattttagt ctggaaataa aaaatggaca acaggcgaac
    16441 gaaggttctg tcattattac tactcagcac ccttgtttgt atagcttgaa ggaaaaaaca
    16501 cttgaagttg gacggaagcg gttgcccgat agtacagaaa taatgatgaa ggcggagggc
    16561 attcctcctg catcaatttc attacaaata acgccaaacc tcactgcaaa cccgattgtt
    16621 atttggttac catttcctgc acgaggctgt cttgcgttcg ataaagatga gaaacctctc
    16681 ccgaaaaatt taacgattaa cgatcttctg ggtgccagag catatctttt cggaaaaaat
    16741 ggtgagccta cgcgatacca gcttgaacta cgtttacgtt cgcgtagtgg aatgcaggcc
    16801 tggtatgagt ggcactacag tgcgggagaa tgtccggtag agcttacttt atatagctta
    16861 agggaacata ttgataattt actctccctg gaggaaggaa ttgatcaaac agttgatatg
    16921 cgcataaaag gaggtggtag ttcttttacc tggcagatcc gacgttataa atatagtctg
    16981 gactatgatc gtggcaggca gattcttctc gcaaactcaa taagtaatcg tacaggccag
    17041 atcccttcgc ccgtcattat gttactcagc gaaccggaga gaaaagttgt actgctgacg
    17101 tcaagaatga gcgaaggtgt accagttggt gaatttgaac taagttcgat aatacaaaag
    17161 aatggcccat ggctggtgct gccgaaacca ggtgaagaag cctcatttcg accttgcttt
    17221 attgcaggtg agccggtaat tcaaagcgac gcgacagcaa tacagtcttt acaaaaagca
    17281 acgcagcttt ttaatcctcg ttcagatgtc aacaccatta tgttagttct ggaacaaatg
    17341 gcgagcgacc cggcacactc gggctggcag ttcttacgca atttatacga tcagttcggg
    17401 tatttacctt tggctacctt tgaagtatgg cgggcacttg ttcagcatcc acaagcgttg
    17461 gcgatgtcgc tgttcaaatt tgaaatgtcc attgattatc tcagccgtat tgaaagtgag
    17521 tttcccgttt tctgggagtt tttatccatt acagaagtta aacgttccgc cacacgtttt
    17581 cgtgcttttt tgactcataa aggtgcaccg gaggaaatgc agataaggtt gctgtacaga
    17641 atgtatcaac agctgggcac aacattcccg acttatgcca gtgaggtgca attatggttg
    17701 agtcaaggga aattaccacc ggtttttcct gagttgacga tgaaaggtat tatccttgag
    17761 tggtatcagg aacttctacg cgaacatggt gaatctcgct ggccagaatt tggtggccca
    17821 ggccttttac gttggtatat gtcgcaacaa aatcctgtta tcgatatttc ccctgatgcc
    17881 agctaccgct attccgtcac cttgctcccc gtatttgctg ctgctgttgc cagcggtaaa
    17941 acaacatttg aaagtgtttt tgagaataag cccggcgccg tatttttctt gagacaggtt
    18001 agagattttg actcacgatg gtttaacgcc attttccaat actgtctatt gcgtaatgtt
    18061 actgaaaaat aaaaaggaat aagaatgact acacgctatt tttcttcgct gattgaacaa
    18121 tcactgtcgc gttctacgga ggcgacgctg agtattatgg gggtgaccaa cccgaatctt
    18181 cgcgagcatc tcacgcaaca aatggcggcc gattgcggga aagaaggatc gtttcttgcc
    18241 tcccccgtat ttgaacagac atttggctgg aaagagtcca acagcacaat gaaagacctt
    18301 gcaacaaaac aaacgttgct aagcaaggag gtggtggact cgctggatag tgaggaaaat
    18361 ggtcgttatc gttttggctc tgactggaaa cctttcacgc atcagttagc cagctggcaa
    18421 tcattacttg agaaaaaaca ctcagtcgtg gtgaccagcg ggacaggctc tggcaaaacg
    18481 gaatgcttta tggtcccggt actggaagac ctctatcgtg agcttcaggt caagaacaaa
    18541 aaaccgttga taggtgtgag agcacttttt ctttacccac tgaatgccct gattaattcc
    18601 cagcgcgagc gtttagatgc gtggacccgt agttttggtt ccggaattcg gtactgtctg
    18661 tataacggta acacagaaga attgcacgct ttggtcaaaa gtgagcaggc aaacaggcct
    18721 aatgaggttt tgtcacgaga gaagatgcgt gaagaacccg cccccatttt agtgaccaac
    18781 ggtaccatgc tggaatacat gatggttcgt caggttgatg caccgattat tcagaaatca
    18841 aaagctgaaa aatcattacg ctggatagtt ctggatgaag cccataccta cgttggttct
    18901 caggccgctg agttggctct acagctccgt cgcgtcatga cggcatttgg cgtcacgcct
    18961 gatgatgttc gctttgtggc gacgtcggcc accattgccg gaagtgatgc tgaaaagcag
    19021 ctgaaaaaat tcttgtctga gctgtcagga gtgccacagg aacgtattga tgttctgggc
    19081 ggaagccgcg ttattcctga gctcgaaccc tgcaaacaat attctctgtc actggatgag
    19141 attgagcata tccctgattc ggagagtgaa gggatcagtc cggagcgtta tagtgcgttg
    19201 acccactctc cggaagcgcg ctgtttacgc gaaatgctgg ttagccaacc ccgaccaatg
    19261 aaacttgata cgctgaccca gcgtttgaac gagctgacca aacatcagta cacgcagcag
    19321 gatgttttac gctggatcga tctttgctct ggcacactcc ctaatgcaaa ggatcctgca
    19381 tttctgaaag tcagagcaca tattttccag cgaaacaccc agggcatctg gacatgtgtg
    19441 gataagaact gtgcagctaa aaaaaatacc gcgctggaaa aaaactggtc ttttggcaat
    19501 gtgtatgtaa atcagcggca aaactgcgag tgcggcagtc ccgtttttga actggcattc
    19561 tgcaatgagt gtaatgaacc gcatcttctt gcacgggata aaaaaggcaa actcgtacag
    19621 tgggataata aaggtggaga tgaattctcc ctacaggatg aaatttctga cgattttgaa
    19681 acatccggag aaaagattca gaaggatttt gtattccagt cgccacaaat tattgctgcg
    19741 gaatgtaata cggaagctgg ctatattatg cagcggctcg atcgtcagac ccgcagtatc
    19801 ggcgtggtga acccggacag tattccgctg gcaattaatg atatcgaaca aatctgtagt
    19861 gccagcaatt gtggctataa aggcggaaag ggtaaacagc ccttccgaag ggcgttactg
    19921 ggcgggcctt tttatgtcac caatattgtg cctacggtgc tggagtattg tcaggacttc
    19981 actagtgatg aaggtaaaga tggtgtcggc ccgctctctt tgcctggtcg aggtcgtcgc
    20041 ctgattacct ttaccgacag tcgtcagggg acggcgcgaa tggcagtacg tatgcagcag
    20101 gaagcagagc gcagccgatt acgtggtagc gtagtagaaa ttcttggctg gcaccaacga
    20161 aaacagccaa cgagtgctcc gaatgaccag gctgacgtga tgaaactggt tgcaagggtg
    20221 acacaatacc gtgaagaagc ccgggagtat cgcgagtggg gaatgcccga ggaagcaaaa
    20281 ctttctgaag ctcaggccga acgccttgaa caggcaatcc agacggcgac ggggggaaag
    20341 gctgcaacca ttttagtttg ccgaacctgg acggaaatgg tcaatgatct gaaagagaaa
    20401 gccgatatac agggaccaat tttacaatat aaccattatc tgaagcctga aattttcacc
    20461 gaaaatggcg gccctttgaa actcgccgaa atgctgcttt tccgtgagtt tatgcgacgc
    20521 ccgaaacgaa ccaacagcct ggaaacccag gggctggttc aggttggcta tcaggggctg
    20581 gagaaggcag gctcacagtg ttcctactca ctggcaggct aaaggcttaa cccttgatga
    20641 ctggcgcgat tttctgaagg tgacgctgga tttctatgtc agagaaagca actacatcca
    20701 actggatgac gatctaagaa actggatcgg tagccgtttc tcttccaaat ttgtccgcaa
    20761 cccagattcg aaagagccag atgacaacca ggttaaacgc tggccgcaaa ttcgccacgg
    20821 taatgtgact cagcgcctgg tcaagctgtt gattttaggg gccaaattta acaccgtaaa
    20881 tacggtaact attgatattg ttaacgcctg gctgaaagaa gcctggctcc agctaacagg
    20941 atctctggcg gtattgaagc ctgatggaaa ccgtttttat ttaccgaaag agcatctgac
    21001 attctctctg gtgcaaaaag cacgcatttg tccagtgacc aataaattac tggcgacaac
    21061 cttcaaaggt ctgaccccct atttgcccat gcatatccag ttcgagcgac tgacgagtgc
    21121 acagtacgac gcgtttttgg ctcaggaagt cacgctgcca gcgatctggg aacacgatcg
    21181 ctctcaggat gattatgtcg acgggttaac aaaagtgcgt gactgggtaa gccaggatcc
    21241 gcaagtgcta ccattacgct cgcaaaacct ctggacggac attaacgatc gcgtggtaga
    21301 aggtggattt tactaccgca ccgcagaaca ctcggcacag caatcgtcgg agcgcctgca
    21361 aagctacgaa agaatgttta aaaacgggca gcttaacgtc cttaactgct caaccacgat
    21421 ggaaatgggt gtggatattg gcggtatttc tgcagtggtg atgaacaacg ttcctccgca
    21481 tccggccaac tatttacagc gagccgggcg tgccgggcgt agtaaagagt cacgcgctat
    21541 ttcgtacacc ttgtgcaaag ggaacccgca cgatcagcag gtttttgcta atcccctctg
    21601 gccgtttgag acggtgatcc cggctccaat ggtggcaatg aactcagagc gtctggtgca
    21661 gcgtcacgtc aattccctgt tactgtcaga atacttatgc catgtggtcg gtgaaaccga
    21721 aaaagagcgt accagcctta atagccagtg gttctttggc gaagagctcg accagtcggt
    21781 atgcaatcgt tttaaagcct ggctcgaacg tccgacgctg agcattgata acgcgctgga
    21841 gcgtctggtt aaagggacgg cattgcacgg cgttacggca gaaaaactgc gggataaaac
    21901 gcaggaggct attgccgtct tacagacacg ctggctgggg atcttccgcg atctcgtgaa
    21961 acaggaaagt gaatcgcagc ccaatacgcc gtaccgcagg cgactggaac tggagaaaaa
    22021 acggcattgt ggtgaatacc tgttacgcga tctggcggcc cgaactttcc tacccggata
    22081 tggcttccca acggatgttg tcacttttga taacttcacc atggaagatt atatccgcga
    22141 gaaaacgcac aaaagccgtg ataagaatga ccgggaggat aacgtttcgc gttataaagg
    22201 gctgccttcg cgcaaccttt ccgttgcgat ccgtgagtat gcgccgggcg cggagattat
    22261 ccttgatggt cgggtattcc gctcggccgg tgtttcgctg cactggcata accttaacgc
    22321 cgatactaac gaagcccagc gtctggacag cgcctggcgt tgccataaat gcggtacttt
    22381 aggctatgag gaaggtattg gtggctcggg ggatttattc tgtaccaata gcgcgtgcgg
    22441 ggagcggatc acgctggata accgacgtca ggtattacag cccgccggtt ttgtcaccga
    22501 tgcccatact cccgttacga acaacattga aacaatgaaa ttcatcccgg tggtgcctgc
    22561 ctgggtgttt gtgaaagcag aacgcgtgcc actgccaaac ccgctgatgg gttttatggc
    22621 gtcaggcgcg gatggtcatg ttttccagca gagcatgggc gaaggtggac acggttatgc
    22681 gctgtgcctg agctgcggcc gggcggagtc aatgctcaat gccaccgata cgccgaaatc
    22741 gatggaagcg cattatcctc cgcgccccgg taaatctgat cgcgacagcc agaatcagcg
    22801 gattatctgc cctggctcca cggcgctgaa taagaatgtc acgctgggtg cgctggcgcg
    22861 caccgatgtg tttgaactca ttttgcgccg tccgcaaaac ggggagtata tccccgataa
    22921 ttctgatgaa ggccgtattg tggccatgac gctggcggtt gcactacgtc gagcgctggc
    22981 cagcgtgctg ggggtatcgg cgacagaact gggctatgcg gtgcgtccgg tcagactgga
    23041 taatgagcaa tcggtcctgg cggtgcagct ttacgacatt atcagcggcg gtgcggggtt
    23101 tgcttccagt gcgccattgc atattgaagc ggtcctcaaa gggatggtga aacagctggg
    23161 atgccgccac tgtgataccg cctgtagcga atgtctgctc gattcgcaga cccgccacga
    23221 tcacgatcag ctggatcgta aagccgcgca ggcctggctg ggggaggatt tcagtcacta
    23281 tatcggtttg ccggaggcgg aaaaattctc cctggccgac gcgcagtatt gcccaggcag
    23341 cattgaggat gctatccgtc gtgccattaa cgacggggcg cgcaaactca cgttgtggat
    23401 gaatgggccg cttaacgagt gggatttgta tgcccgccag ttccgaacgg cgatccagaa
    23461 ctatcggctg aaagatgagg ttgaggttac gctggttgtg cccggtcata ttgaagatcc
    23521 ggagctttta caggagattg cgcagtttgc cgccattggt atgcagcttt gccagtctga
    23581 gctgaatacg gatacgccgg ttgtcgcaca ggtagcattc aacgatcgcc tgatgatgtt
    23641 gatttctcgc agcccagagg ccaccatccc cggcccgaac tggcatctga atagccagat
    23701 ggttattcgc agccatgcgt ttgagccgat aacgcttagt aaagcagagc tattatccga
    23761 tgccgcaggt agcagaggcc tggtcaacga tattgagatc cataagcagc ttaatggccc
    23821 ggtttctcaa tttggtcagc gtttctgggg cgtgttaacc ggggcgcagg aagatattca
    23881 gacgctgctg aaggaaaacc aggtgacgcg cattcactat agcgatcgtt atctgcaaaa
    23941 cccggtggcg ctggcgttat taggcgggct gttaaaaccg ctgaaatcga tcctggcgca
    24001 ggatgcgcaa gtgacgattg atacgctgtt taagagtaaa gagcggccag gcaacaagcc
    24061 gttccatgac tggatgagtg aagcggattt tcaggatttt gccgaccagt ggtttgcggc
    24121 atctatgggc agagccgtcg tggttaacac cgttggctcg ccgcgtgata ttccacacca
    24181 tcgtaaactg atggtgacct tcagtaatgg tcaggcgctg aagatccgtt ttgaccaagg
    24241 gatgggatac tggcgcatcg tctttgcgcg agcgtatcgc gattttgatt ttaacgatga
    24301 tgtggctttc cagctcggga atatggcaaa agcctgcgtt gaaggtcagg tggtcaacag
    24361 cgaggaaagt tgggcaaccg atgtgctggt gcaggtgata gtcccttaat gcgaaaccgc
    24421 tcccgattaa acatcgggag cggctaacat caggcggtgg tgcgcttgcc ggtaatcatg
    24481 tcgataatga ccctggcaca aattcagtac agtgctaaat cagagagctt cgtctttccg
    24541 gagacttcgg ataaattcag ccggagtcat gtcatttaat gatgaatgcg ttctctcatg
    24601 attgtattcc ctgcgccagt tgtcgggttt ttcctgcgca tcttccagtg acaggaacca
    24661 gtgaatgttc aggcattcat cccgcagact gccgttaaat ggttcaataa acgggttatc
    24721 tgtcggcttt ccggggcgcg agaagtccat tgtgacgccg tgttcatacg cccatttatc
    24781 cagacttttt gagataaact cgctgccgtt atccgtctgg attcgtaccg gcagccgctt
    24841 atccggcacc cgcagtgcct ccattattct gaccacatcc tcgcctttta acgattttcc
    24901 ggcatggatc gccaggcatt cccgactaaa attatccact acagccagcg cccgaaaacg
    24961 ccgcccgtta aacagattat ctgacacaaa atccatactc cggcactgat cgacatgcgt
    25021 cagaaccggg cgctgataca gtaagcctcc cgcaaaaatg taaccgcctg gcgcttctga
    25081 gccggcctca gaacttttgc ttcagtacct cctgcagcat ctccttgtcg agactcagct
    25141 cagcgaccag cttcttcagc cgctgattct catcctccag ttgccgcaga cgccgctgtt
    25201 ccgtcacgcc cggcccggca aattttttct tccagttgta aaatgtggcc tcagaaattc
    25261 ccatctttct gcagacttcc ccgacgcggg tgccggtttc agcctgtttc agggcaaatg
    25321 cagtctgttc ttcggtataa cgggtctttt tcatggcaat gcgcctctct gtgagatgga
    25381 agaaagaccg gaaacttcag tttagactgg cactgtttac agggggaagg tcaggggaag
    25441 gtcatcaacc agcttcccac catcaccaca aaccagaata attccctgaa aaaagatgcg
    25501 ctgaatgtta tgtttttcat catctttcca ctgtcagaat ccaccgctga caccggcacc
    25561 aacaccggtc ggcttcacgc ggcgaatttt acttcacctt ccgcgccgcc tcatcctcag
    25621 gacgaagccg tgcgggtgaa gcggtaaaac agattcggtt cactgactat ccacagcgtg
    25681 tcccggtcat ctgaggctat cccctccgcc tgcgggatat cccttcgcag gccacagtgt
    25741 ccccggcgca gcgacatcac cttcctcccg ccgtccagat ccgacaccac gaccacggca
    25801 gattcatggg aaagtacata caggagcccg ttgttccggt cataatgcag accggagata
    25861 tccttcagga accatggcag ggacgcccgg tgtgtcagcg agtcactcac cgacagcgca
    25921 tcagggctcc ggtccgtcac gtaaagccgc agcggttttt tctcctgcgc caccatcagg
    25981 gcatgctctc cccgtcccca ggcaaggcct tcaaaaccgg cattgtcgct gtgcctgttc
    26041 acatccagcg tcaggctgta tgttgccggc gggaggacgg tcgtgctgct gtcaatgcag
    26101 tgggtggtga gcgtccgctc ccgctcccgg gacagggcat agcggttccc gccgaggtat
    26161 tcgatggcct caaaatcgtg gtcgccgtct gacggtatca cccgcagcac gttcccttcc
    26221 gtgtccagct ccaccaccga ggaggggtgg tcggtcacgg caaacagcgt tctgctgtcc
    26281 gggttccatg tcaggccgga gaggccgccg tgtatcccgg taatttcttt ttctgccgtg
    26341 agctgccatt ctgtttcctg cgggtaccag gactccggga aacacagggt gagcacgccg
    26401 gccgccatca ggagaatggc ggtcagcagt gcagctttct ggttacataa atatctgaac
    26461 atcgtggtgg tgaaagttat gttttctgtt acaggggaga ccggacttca catcatgccc
    26521 cacggcagat aagccagagc atggccaaga cgccggtcag aaagccggag ataaagacgc
    26581 tggtcagcag caggagaatc agcgcgcgga gcggggggat atctccggcc tgtatggtgc
    26641 ctttatcatc agtcggcatc agggttaccg gccagcagtt tccggaccac cgcggcataa
    26701 cggctcctga aatcttcgac ggagaatgca ccgaaggcgg cattgttgat atggtaacgg
    26761 ccacggacat acacggaagg cgtccccctc acgccatatt ccttaaacaa ccgttcctgt
    26821 aatgccacca tgtcattcac ggcgggactt tttatacttc tgtcatactc cccgcgactg
    26881 ataccggtag cagacataaa cacccgacgg acatcgtccg gggaatgcag gcgtttctcc
    26941 accatgtcgg ccgtgaagaa ggccttctcg accacgtcag tttccttcat catcatggcc
    27001 agcgcccagg cctgtgtcag ctcatggccg agggggccca gcaggctgac atggtacttg
    27061 atcatccggt caccgtgcgg cagtacgtgc cggatggccc gggccacgcc catcgtctgt
    27121 gagaacgcat agcagggcgg acagtaaaag aaaaatagtt ccacctcggc gggggcatca
    27181 gccaccaagg gagttatgaa ctcccactcc tgcgcaatca caggacgggc gcggccaggt
    27241 aaaaaaaaaa gaaaataata ttcccctcag gaaaaacagc tcccgggcat aattcatcgt
    27301 cacggaaaca ctccatggat aacagatata cagaatgaaa ggccgcttaa cggtaccgcc
    27361 tgacagcagc agtaaatctt aattcatccg gcacggtcat taagccggca gccggaatat
    27421 tccggtcatg agttttccag aataaaaagc actgacacac aaaagaccat tgccattaat
    27481 atgacgacgg ccagacaggc gtaataaacg aatttcatga acatgataaa ataactttca
    27541 gtgatactta tccagcttcc gacccacatt ccgggccgct ctcctccagt gaatgacacc
    27601 ggttcaggtc tgtatacagt gtcaccatcc ccagaagcat cagggttggc aacagggtgg
    27661 catcattcct gacgccgagg cgcctgaaag ccaggccttt ctgggctgaa atggttttga
    27721 cgctgcgaaa acagagggca gcaatctgcc cgcagttata gccctgcagc agcagtcgga
    27781 taacccgcag ttcagccgga ctcagtccgc cgtcgctgtt aaattcgata caaagccgat
    27841 cgtaccatat ccggctgatg tccccgtctt ccgggaaagc ggtcaaagca gacgccataa
    27901 tccgggcgct ccctttccgg catttacttt ctcaagcacc ccgacagcac ggagttgctc
    27961 aagatatgag cggacctggt agatactgag tccggcagca tcagcaatat cgcggatttt
    28021 aacaggcgcg ttgtccgtac tctgacgctc ccggatgatg gagatgatgt ttgtaatgat
    28081 ggattcaccc ataaacggcc ccactcttca aggttaaaat aaatgtattt accactacca
    28141 caaaataata ctaatccatt ctatagcaac ctcattacga tatggtcaaa ccaagacgaa
    28201 aagtaaaaat atatgaatat tttgatggtt catttatgcg tattcacttt catcagagtc
    28261 actcgagtat tggttatgta taaagcccta cctttaagac gtcacatcaa aggcatttca
    28321 gtatccccat tcaacattta tacggagtat ttaaaatctt aggagatagt catatctatt
    28381 tttataggtc caatcaagcc tgcccggact gtacagtacc ggcattaaaa gaaatatcac
    28441 atggctctcc gttggatata gatgaacaca attaattgag cataacgaaa caacaactcc
    28501 tataaagcac ttataacaac cacacatggc ttacactgta tttagatatt ttaaaacatc
    28561 atcttcggct aatcatatct aataaagtta tttttatatc ataaaacaat acctacaata
    28621 atataaaatc ggcttctgca gtgaagcgta aaaattaggt gcaattccat gctgaaaaaa
    28681 aacgccataa aaataaaact atatcgttat gctattttac attcgaaaaa ctgtattatt
    28741 accattaaga acaagtcaaa gccagaggaa ataaaaataa ctagaggcaa catagcctta
    28801 atagaaaaaa tatagaagct gttgtggaaa ttgaatatat ggatgatatt gaatcatttg
    28861 atattattac tttaccagat gaattattaa gtagagtttt atgcttattt gaggcttcta
    28921 attgctcaga aagtttatca ccaatacgct acagaacatt tagcgataag gtttttatta
    28981 taaccgacag tggaattaat ggaattttat ttgaatattt aaaaaagaga aaaaataaca
    29041 acaacgatat ttatgaaatt gcctgtttat tttcaaaagt gaataatatc gagcagctat
    29101 acacatctct gtgcatttca gtctcacgta gtttttctga tattgttaga aaaacaatag
    29161 ataatgacat ttcaacaaaa tggagattaa aaacattatc cgaaaaacta aatttatcag
    29221 aagtgactat cagaaaaaaa cttgagaatg aaaatactaa tttttacaga atccttctag
    29281 atgccaggat gcaaaaagca gcgcgtttgg tacttgatag cgacacacat attaataaag
    29341 tatcatatgc cgtaggaatg tcaagcgtat catatttcat taagttattt tctgactatt
    29401 atggtttaac cccaaaacaa ttccatctaa aatataagca tagaaataca ggagaaaaag
    29461 ctgtatttat gctttataat taagagttat aggtgcgcca atttgcgcac cctttattat
    29521 aattcaattt ctgtcgcata tatgcttatt aaataggtat caacgggaat gtttccattc
    29581 ccaaaataat aaatattaaa ttcattagta aaatcagaat gagataccat accaatacct
    29641 gaattatctg gttgccagtc ttctccacct attcttatcc taagcttatg ggctgagtta
    29701 ttctgacctc taataatata tgcccctggg gtatttttaa ttttttctaa acttgaacta
    29761 atgaggattt ttttccctct ctgttaaata gatgccccgt acctattatt ttattacttg
    29821 taatacggtc ataaaaaaca gcctcattta ttttaatcat taatttaagt tcttgtgctt
    29881 taatagttga gctgaaaaaa ccagtaacaa tcagaaaaac agagacaatg aacttaggta
    29941 ttgacgaatt atactgattc atttgcacac tccatttaaa aagctaatct gacctttgtt
    30001 tttatcggga agagagtaaa aaactgtaca agtatcggag ggcttattcc cccacgaagc
    30061 gattaatttt tgcactcctg acaatccaga tacatatgcc tgaccatctt cgccaacaat
    30121 agatgttgat tggattactc catcattatt cttaagtgaa agaactgtgc taagagctag
    30181 tggctttcca tttgttcttg taattctaat taatgcatta gtacccacgc ttgttttata
    30241 tacagctttt acaatagcac cttcggtagg aactacttga atatcagttt gcctaatatc
    30301 cgtatttatt ggtaacgttg ttggatctat agatatgaag ttattcatat atggagtaag
    30361 ataactggat attgtatagc ctctaaaatc ggttctaaca cctggtaggc ccagaacttt
    30421 tgccccactt acacctttag cctcgaccag tgcagcagta tccgatatac tctgaccaaa
    30481 cgtaattcct gatgaatgag caatcacccc accagaaaca ttcatcccaa tatcacgatt
    30541 tatttcatta tgactatagt ttgctccgat ctccccataa gtacctcgcc aagaagcatt
    30601 taaaaatgta gccttttgat ttttcgattt atcttctatt tgccctcttg cttgccatgt
    30661 caattggcta tcaaatgcca caccagtaat acctaaatca tgattcatat catgctttga
    30721 agaggatgag ttttgatatg tagcatacat ttcatgattt gtaagttttt gcaaaggtac
    30781 actgagtaga aaactgaata aatcttcatt ttcttcacta atctttgatg tacttttcgt
    30841 atatgaaagc gataacgaaa caccatttaa attcttccca taactagcaa ttattgattt
    30901 tttaccttca tgtttccaat atttatcata attgtagctt aagttaacag aacccagaga
    30961 tcctaatgcc tgacttaata acatagaggt tgttgatttc ttatttttat cgtaaaattc
    31021 atcatgctcg ctactatgaa ttgcttcaga aaaagttcta taatttttcg aataatagta
    31081 atgactagcc aaagatactt cggtgtttgt ctgagcgata tttttattgt atctaatccc
    31141 atatgcatga ccattttcat tggatgtatc agtcttcgaa acagatgttt tccagtcaaa
    31201 agacagagca ccatactcac caatatcttt acttgcgcct atggcgtatg aattataaat
    31261 atttgcccat tgcactccac caaataaagt aaacccataa ggcagaccat atatataagt
    31321 cccttcaaaa aaaacaggat cgatataatc attgttaacc tccctgtatc taccaatagt
    31381 tacactatat ttagaatatc catcaggcaa agataataca ggagttgaat atggcactgt
    31441 atagttttgg acctgcccat ttttttcata aatgctaaca tcaagaaccc caacaccaac
    31501 accaacacca acaccaacac caacaccaac accaacacca acaccaacac caagatcagc
    31561 aatttgttct ctacctatct cgaattgccc gggggggact gaagtagaat atatcaagta
    31621 tccattttgt cttacttcta cagtcgcatt ggttttcgca ataccacgta ttgttggata
    31681 atatgttctc tgtgagaaag gtatcatact ttcatcttta tttaaagaaa agcctctaaa
    31741 tggtacgcta tcgaataaat ctgcactggt atatttgtcc ccaactgtta gtttgctctt
    31801 tatttttttt aaacctcgct cagcataaat atatgctgat tcaaattttt tttcgcttga
    31861 caagttttgc caagatgata gattccttag ccgccaggga ccaaaattaa aaccaagttg
    31921 aatttgacca aagtatgaat cttctcctcc aaccttagaa tgcaaataat tagctctgta
    31981 atttaaaaga aaagcgttaa tgccatcatc ccagatattt tcatcagcaa tttcactgtc
    32041 tattggagat agaattttag atggtgcatt taaaagcaaa ctttggttag ccgcgttata
    32101 agtatattta agaggagaat gctctaagag aacgcattgt tcattatcaa actgcaaccc
    32161 atgaagctcc tggatggcga tcccatactt tataagtttt tcttttgtta agcatggttc
    32221 tagagtctga gtcattgatt tgaaatacaa ctcagtagtt tcttttaact gattattcaa
    32281 atatacatca acaacataat taccaggaag cgtttcaaca cttagaaaag atgcattctc
    32341 accgggagga agactcaaac ttccatagtc gaaattatat tgtctggaga aaacatttcc
    32401 agagtgaaat acactggtta aaacaaatag agtaattgtg gttttcttca tttgtttaca
    32461 ccttaaaata ataatctctt ataatttcag cgccgttatc atccaaaata gtcaaagtta
    32521 ttttactatg tactccacca ggtaattgag catatccaaa tggctcaata tatccatttg
    32581 gaatattaaa acttaaatta ccagatttaa tatttgcaat attcacatat gatgatgttg
    32641 gattctttat aactatacta tttccttttc tctctaactt taatttatct gcaatctcca
    32701 ttgtcgttaa gtctatagtt ttaggcctat aaattaattt aatacaacta ttcgtaacca
    32761 cattcacatt aagattcgta gttatgttgt ttttattatt gctttcatta tcatttagtg
    32821 gtgggactcc ttttacacac aaccaataca aagactcctc atttttattg aatagattac
    32881 ttgttggtat taccttcaat cttgttcgcg cattactttc aactttcaaa ataggtggtg
    32941 ttacaataaa tggagctttt gatgatttat catcattata tacttgagtt tgaacaagga
    33001 ttggatattc tttttcattc ataatccaaa aacttgttga tggagcatct tctttataaa
    33061 taacacgtgt agtgcccaat cttaggccat aatatttttg tgttaataat ggttgctcaa
    33121 tttttttact ttccgaagaa gcaattggaa ggtagcaaaa aaagaaaaag ataacagtta
    33181 tacgtataca tttattcaaa atatacataa tccctcttta agtttttgca tggaagcata
    33241 aaacctatct attcaaaata gatattttta aaataataaa attatccaaa tgccctcata
    33301 ttgagggcat ttataaagtt taaattaaat tagttttgat actgctgaac gtagaaggtc
    33361 gcagtgaaag tacctgctgg cagggtcgat ttaccaaagg ttgtgacagg gacatttagc
    33421 gtttcttgag agctggcaac tcgccaacct gcaagcccgt caattccagt atttgcttgg
    33481 tcattaatat tggctccctg aatataccca cggaaaacag gctgtccttg tccatcaacg
    33541 aacgggacag tggctacacc accagatacc gaagcccctt acctgcaata gatactgagt
    33601 tatgtggacc agtagcagta atgctgagag taccaacttt ctgaccagca gcaacatcag
    33661 gccctgtaaa gccaggatcc tgactccagt tggctgatgt tgtattctga gctgcaatag
    33721 taaccgctgc ctgaacctct gctttgttac caacaaagcc agctgcgtgg gcactgccac
    33781 atgcaattaa agcaagaact gctactgcag atgctgattt acgcatatta caaaatctcc
    33841 aaaaatcaac tattagcatt cgcacaattt atctgtgcgg atgctaatat actcacgcca
    33901 ttttaaaaat ttaagcaaaa aacaaggatc actatttttt tatctttaca cgcccccccc
    33961 attaataagc gaatgatcca ttaatacttt ttgtggaata tctaatatcc acatgtttaa
    34021 aaaatttcat atcaaccctt tatttaaaaa gcataaacaa aaaaatacat ccaaataaaa
    34081 atgtttatgt tatttattga gagaatgggt tgtctgatct tacccagcaa gagtggacat
    34141 gcgactaagt gagtaaactc tcaagaaaga ggtgtctcac atgacaaaag cagcatcaac
    34201 caccaaaaag ccatgcaagc aacatacgcc tgaatttcgc gacgaagcct tgaaactggc
    34261 taacgcattg ggatggctgc ggctaccagc gagcttaacc tgtatgaatc gcagctctac
    34321 aactggcgaa gaaaacagca aaatcagctc tcttcttctg aacgcgaata ggagatgtcc
    34381 gcagagatcg tccgtctgaa gcatcaactg gcagaacggg atgaggaact gactattctc
    34441 cagaaggtcg cgacatactt cgcgaaacgc ctgaaatgaa gtatgtcttc atcgaaaaac
    34501 atcaggctga gttcagtatc aaagccatgt gccgtgtact tcaggttgcc cgtagtggct
    34561 ggtacgtctg gcatcagcgt cgtcatcaga taaaccagcg tcagcagttc cgccttgtct
    34621 gtgataacgt cgcccgggag gcattcagtg acgcaaacag cgctatggtg cgccacgcct
    34681 gacggatgag cttcgtgctc agggacgggt gtataccgta gcggccagcc tgcgccggca
    34741 ggcgctgcgg gcgaaagctt cacggaagat cagtccagtc agttaccgcg aacatggtct
    34801 gccagtccag agaatctgct gaagcaggac ttttacgtca gtggcccgaa tcagaaatgg
    34861 gtgggtgaca tcatgtatct tcgcaccggt gaaggctggc tttatctggc cgtggttatt
    34921 gacctgtggc cgcagtcagc cactggctgg tctatgtcct cgcggatgac ggcacagttt
    34981 gcctgcgatg cattacacat agcgctgtgg cggcgtaaac gaccggaaaa gtcaccatat
    35041 atacagacag aggcagtaag tactgttcag cggattacca gagcttactg aaacggcata
    35101 atctgcgggg caggatgagc gccagaggct gttgttacga taatgcctgt gcggaaagct
    35161 tcttccacac gctgaaggtg gaatgtatgc atggagagga ctttgccagc cgggaaataa
    35221 tgcgggcagc agtgtttaat tatattgagt gcgattacaa tcgctggcgt cgccacagtg
    35281 cctgtggcgg tctcagtccg gaacaatttg aaaaccagaa ccgcgcttaa ggttgtatcc
    35341 ctattacgcg ggtaggatca gtttaccccc gaaacggtat tggagttgcc agtattttga
    35401 accattgggg ttgatcagca ggtgcatacc ctgcccatct gtgagtttga agggtttgtc
    35461 ggagggcttg gtagtcctaa ctttgatatc ggtgagagcc atcagttgat acctccagtg
    35521 ttggtaccaa aatcaatcga accgggaata ccatcagtta taccatcatc ggttggtata
    35581 tgttcaagga attgagtaga cgtgaacaga ctaagccaag tcagaaattc gcttaactta
    35641 ctgtttttgt ggattaaagt agacgttagt agacttgaaa aaagctttgt atggtgcgaa
    35701 ggccggactc aaaacacaac ataataaatt gaaaataaag gaaataaaga agaacacatg
    35761 ttcatgtgcc cccttttgtg cccccatggc tttttaagcc ccttaagttc acaactgatt
    35821 ggtattaaaa aggaaattgt tattttcccc atcggttagg ttccgatata cggatcctaa
    35881 ccggggtaat attgaacatc agtaaaattc tttttttcca tataactgtt cacactgttc
    35941 acctcttcac ttttcttttt aatatcatgg tgataagtgg tgatgagttg gtgaagagtg
    36001 aacaatcgac tcttcacatt tgtgattttt gctcgtcctg gatgcgcctg gtcaggcgat
    36061 gcgcagggtg ataaaaagtt ttttcaggtt ttattgttca cactgttcac ctctggtttt
    36121 ttatcaataa tttcatggtg atacagggtg aatatacggt gaagggtgaa cagtggagtg
    36181 ttcaccctgt ggcaatgtcc agaaagaaaa agaccggctg ttgccggtct ggagttggtt
    36241 atgttgctgc gggttcctcg catttcggca gccagtcgcc gtagctttcc tctttcagcg
    36301 acagattggt ttgtatcccc tgctttgtgt gccgcttctc ataattcagg ccgtattctt
    36361 tcagcatcat gggcagcccc agcccgaaca ttttcaggct gagcacgttc ctgtacccgt
    36421 tagcctccat ataggccaga tacgcgtgat aaagatattt acggtaatta cgcgggataa
    36481 tactggcatt acccataaac atcccgttgg tctgcgggag catttccaga tagccgcaaa
    36541 aatcaaacgt cgggtcagca tcgcgcttga tactgagtgc ctcgtcggag ttctgctgtg
    36601 actggagcag tgtgcgcgct gtcatcgggt cgctgaactt ctgcataagc tgacgcacaa
    36661 tgatggccag ctcgcgcgca attttatccc tgagctgcgg gtcgcgttcc tccggggcaa
    36721 tctgctccgg gaagtgaata atcacccggc ggcgcgatac accaccgctg cggtcggtaa
    36781 agcgcatcgg gttattgttc acggccagaa tcaccgctgg aatatgggtg gagtacgcat
    36841 ccttgtattt cgggtcaacg gagaccgcat ccccgccggt gatggccttg agtcctgccc
    36901 cgtcaccgct ccatttttcc tggtcaggca gtcgtatcag agagaagcca atcagcgcag
    36961 cgcgttcgcg gggtgattcc agcgtttcga tggtggccga cgtggcgtta tcttccccgg
    37021 caagcatggt cgcaatttcg gccagaatac tttttccgct cccgccgggg ccggtgactt
    37081 cgagaaagag ctgccagtcg taacggttcg ccagaaccat aaacagcgcg gccagaatca
    37141 catcgcgttt ttccggtttg ccaccggcag cgcggtcaag ccagcgccag aaatgagggg
    37201 cgtgggtttc cagcgtttcg ccctccaccg gtgaggtgaa atcaacatca catagcgtgc
    37261 gcagccagtg cgatttgtgg tgcgggctga aagtgccggt ggcggtatcg agtaccccgt
    37321 tacgaaaacc aatcagacgg cgcgccggtg cgtcctgctg cggaataatc agtttcaggg
    37381 tctccaccac tgaggcaatt ttccccgacg agaacggggc gcgcagacgc tgaaacaacc
    37441 cggccacgtc gcgggcaaaa tccgacgggg gaatgatttt ccatattcct gcctcatatc
    37501 gggacaggag ctggccgttc gcatccacgg ccagcgcttc gccgtaatgt tcatgcaccc
    37561 gcattgcctt ttcactggtg ctcatggcgg taaattccgc ttcgctcatg gtagtgaaag
    37621 ggctgtcagc cggaggccgg atggcgtcat aaatggcttt ccgcgtggcc tcttcacctt
    37681 tctgcataaa cgcatcattc cagtcaccga acaccggcgg cagggcgaca atgccctcgc
    37741 aggcgtctgc ggccgcagcg gctttactct ggccgttgcc gttaaggtca cggtcggcgg
    37801 cgaggacaat ctgacaggcc gggtgtttct gacgggcaag gctcgccaga gaaagtaggt
    37861 tcacggagga cagcgccacc atgacggttt ccccggtcag gtgatgtacg gtgagcgcgg
    37921 tcgcatagcc ctccgcaacc c
//
LOCUS       DAGWFR010000019        36809 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.019, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000019 DAGWFR010000000
VERSION     DAGWFR010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 36809)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 36809)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..36809
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.019"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..151
                     /locus_tag="MOX77_001127"
     CDS             <1..151
                     /locus_tag="MOX77_001127"
                     /EC_number="5.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461049.1"
                     /note="capsular polysaccharide biosynthesis protein;
                     catalyzes the formation of D-mannose 6-phosphate from
                     alpha-D-mannose 1-phosphate; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphomannomutase CpsG"
                     /protein_id="HCA3356723.1"
                     /translation="DGLSMSFADWRFNLRSSNTEPVVRLNVESRGDIPLMEARTRTLL
                     ALLNQ"
     gene            205..1599
                     /gene="wcaJ"
                     /locus_tag="MOX77_001128"
     CDS             205..1599
                     /gene="wcaJ"
                     /locus_tag="MOX77_001128"
                     /EC_number="2.7.8.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-phosphate glucose
                     phosphotransferase"
                     /protein_id="HCA3356724.1"
                     /translation="MTNLKKRERAKTNASLISMVQRFSDITIMFGGLWFICEVSGLPF
                     LYMHLLVALITLVVFQMLGGMTDFYRSWRGVKMSTELTLLLQNWTLSLIFSAGLVAFN
                     DDFDNRLATWLAWYALSSLGLVLCRSFIRFGAGWLRNRGYNTRRGAVAGDLPAGQALL
                     DSFRNEPWLGFEVVGVYHDPKPGGVSADWAGNFEQLIDDAKASRIHNVYIAMSMSDGA
                     MVKKLVRELADTTCSVILIPDVFTFNILHSRVEEMSGVPVVPLYDTPLSGINRLLKRA
                     EDIVLASLILLLISPVLCCIAPAVKLSSPGPVIFRQTRYGMDGKPSKVWRFRSMKVME
                     NDKVVTQATQNDPRVTRVGNFLRRTSLDELPQFINVLTGGMSIVGPRPHAVAHNEQYR
                     QLIEGYMLRHKMKPGITGWAQINGWRGETDTLEKMEKRVEFDLEYIREWSIWFDIKIV
                     FLTIFKGFVNKAAY"
     gene            1701..3179
                     /gene="wzxC"
                     /locus_tag="MOX77_001129"
     CDS             1701..3179
                     /gene="wzxC"
                     /locus_tag="MOX77_001129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid undecaprenyl disphosphate flippase
                     WzxC"
                     /protein_id="HCA3356725.1"
                     /translation="MSLRQKTISGVKWSAIATIVIIGLGLIQMTVLARIIDNHQFGLL
                     TVSLVIIALADTISDFGIANSIIQRKTIGHLELTTLYWLNVGLGIVVFAVVFWLSDAI
                     AHVLHNPDLAPLIKTLSLAFIVIPHGQQFRALMQKELEFNKIGMIETTSVLAGFTFTV
                     ISAHYWPLALTAILGYLVNSAVRTLLFGYFGRKIYRPGLHFSLASVSTNLRFGAWLTA
                     DSIVNYINTNLSTLVLARILGASVAGGYNLAYNVAVVPPAKLNPIITRVLFPAFAKIQ
                     DDTEKLRVNFYKLLSVVGIINFPALLGLMVVANNFVPLVFGEKWNSIIPILKLLCVVG
                     LLRSVGNPIGSLLMAKARVDISFKFNVFKTFLFIPAILIGGHLAGAIGVTLGFLVVQI
                     INTILSYFVMIKPVLGSSYRQYILSLWLPFYLSLPTFITSYGAGKLVDGYLPLSGVFA
                     LQVVVGILSFILMIIFSRNALVMEIKNQLVGSEKMKKLLRVG"
     gene            3201..4479
                     /gene="wcaK"
                     /locus_tag="MOX77_001130"
                     /pseudo
     CDS             3201..4479
                     /gene="wcaK"
                     /locus_tag="MOX77_001130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461046.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis pyruvyl transferase
                     WcaK"
     gene            4476..5696
                     /gene="wcaL"
                     /locus_tag="MOX77_001131"
     CDS             4476..5696
                     /gene="wcaL"
                     /locus_tag="MOX77_001131"
                     /EC_number="2.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis glycosyltransferase
                     WcaL"
                     /protein_id="HCA3356726.1"
                     /translation="MKVSFFLLKFPLSSETFVLNQITAFIDMGHEVEIVALQKGDTQH
                     THAAWEKYGLAAKTRWLQDEPQGRLAKLRYRACKTLPGLHRAATWKALNFTRYGDESR
                     NLILSAICAQAGQPFVADVFIAHFGPAGVTAAKLRELGVLRGKIETIFHGIDISSREV
                     LSHYTPEYQQLFRRGDLMLPISDLWAGRLKSMGCPPEKIAVSRMGVDMTRFSHRPVKA
                     PGMPLEMISVARLTEKKGLHVAIEACRQLKAQGVAFRYRILGIGPWERRLRTLIEQYQ
                     LEDVIEMPGFKPSHEVKAMLDDADVFLLPSITGTDGDMEGIPVALMETMAVGIPVVST
                     VHSGIPELVEAGKSGWLVPENDAQALAARLAEFSRIDHDTLGSVIMRAREKVAQDFNQ
                     QAINRQLASLLQTI"
     gene            5707..7110
                     /gene="wcaM"
                     /locus_tag="MOX77_001132"
     CDS             5707..7110
                     /gene="wcaM"
                     /locus_tag="MOX77_001132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis protein WcaM"
                     /protein_id="HCA3356727.1"
                     /translation="MPATKFSRRTLLTAGSALAVLPFLRALPVQAREPRQTVDIKDYP
                     ADDGIASFKQAFADGQTVVVPSGWVCENINAAITIPAGKTLRIQGAVRGNGRGRFILL
                     DGCQVVGEQGGSLHNVTLDVRGSDCVIKGVTMSGFGPVAQIFIGGKEPQVMRNLIIDD
                     ITVTHANYAILRQGFHNQMDGARITHSRFSDLQGDAIEWNVAIHDRDILISDHVIERI
                     DCTNGKINWGIGIGLAGSAYDNSYPEDQAVKNFVVANITGSDCRQLVHVENGKHFVIR
                     NVKAKNITPDFSKNAGIDNATIAIYGCDNFVIDNIDMTNSAGMLIGYGVVKGKYLSIP
                     QNFKLNAIRLDNRQVAYKLRGIQISSGNAPSFVAITNVRMTRATLELHNQPQHLFLRN
                     INVMQTSAIGPALKMHFDLRKDVRGQFMARQDTLLSLANVHAINENGQSSVDIDRINH
                     QTVNVEAVNFSLPKRGG"
     gene            7288..8181
                     /gene="galF"
                     /locus_tag="MOX77_001133"
     CDS             7288..8181
                     /gene="galF"
                     /locus_tag="MOX77_001133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GalU regulator GalF"
                     /protein_id="HCA3356728.1"
                     /translation="MMNLKAVIPVAGLGMHMLPATKAIPKEMLPIVDKPMIQYIVDEI
                     VAAGIKEIVLVTHASKNAVENHFDTSYELESLLEQRVKRQLLAEVQSICPPGVTIMNV
                     RQAQPLGLGHSILCARPVVGDNPFIVVLPDIIIDDATADPLRYNLAAMVARFNETGRS
                     QVLAKRMKGDLSEYSVIQTKEPLDNEGKVSRIVEFIEKPDQPQTLDSDLMAVGRYVLS
                     ADIWAELERTEPGAWGRIQLTDAIAELAKKQSVDAMLMTGDSYDCGKKMGYMQAFVKY
                     GLRNLKEGAKFRKSIEQLLHE"
     gene            8558..9643
                     /gene="rfbB"
                     /locus_tag="MOX77_001134"
     CDS             8558..9643
                     /gene="rfbB"
                     /locus_tag="MOX77_001134"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HCA3356729.1"
                     /translation="MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLS
                     DISESNRYNFEHADICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIV
                     GTYVLLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTA
                     YAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEG
                     KPLPIYGKGDQIRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDL
                     LDEIVPKATSYREQITYVADRPGHDRRYAIDAGKISRELGWKPLETFESGIRKTVEWY
                     LANTQWVNNVKSGAYQSWIEQNYEGRQ"
     gene            9643..10542
                     /gene="rfbD"
                     /locus_tag="MOX77_001135"
     CDS             9643..10542
                     /gene="rfbD"
                     /locus_tag="MOX77_001135"
                     /EC_number="1.1.1.133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose reductase"
                     /protein_id="HCA3356730.1"
                     /translation="MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPK
                     GVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANEIGAWVVHY
                     STDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDNCPKYLIFRTSWVYAGKGN
                     NFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVTLNKPEVAGLYHLVAG
                     GTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFG
                     LILPQWELGVKRMLTEMFTTTTI"
     gene            10590..11468
                     /gene="rfbA"
                     /locus_tag="MOX77_001136"
     CDS             10590..11468
                     /gene="rfbA"
                     /locus_tag="MOX77_001136"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HCA3356731.1"
                     /translation="MKTRKGIILAGGSGTRLYPVTMAVSKQLLPIYDKPMIYYPLSTL
                     MLAGIRDILIISTPQDTPRFQQLLGDGSQWGLNLQYKVQPSPDGLAQAFIIGEEFIGN
                     NDCALVLGDNIFYGHDLPKLMEAAVNKESGATVFAYHVNDPERYGVVEFDQNGTAVSL
                     EEKPLQPKSNYAVTGLYFYDNSVVEMAKNLKPSSRGELEITDINRIYMDQGRLSVAMM
                     GRGYAWLDTGTHQSLIEASNFIATIEERQGLKVSCPEEIAFRKNFINAQQVIKLAGPL
                     SKNDYGKYLLKMVKGL"
     gene            11469..12020
                     /gene="rfbC"
                     /locus_tag="MOX77_001137"
     CDS             11469..12020
                     /gene="rfbC"
                     /locus_tag="MOX77_001137"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HCA3356732.1"
                     /translation="MMIVIKTAIPDVLILEPKVFGDERGFFFESYNQQTFEESIGRKV
                     TFVQDNHSKSKKNVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGV
                     NLSAENKRQLWIPEGFAHGFVTLSDYAEFLYKATNYYSPSSEGSILWNDETIGIEWPF
                     SQLPELSAKDAAAPLLHQALLTE"
     gene            12026..13000
                     /locus_tag="MOX77_001138"
     CDS             12026..13000
                     /locus_tag="MOX77_001138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000018225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-6-deoxy-delta-3,4-glucoseen reductase"
                     /protein_id="HCA3356733.1"
                     /translation="MSHIIKIFPSNIEFSGREDESILDAALSAGIHLEHSCKAGDCGI
                     CESDLLAGEVVDSKGNIFGQGDKILTCCCKPKTALELNAHFFPELAGQTKKIVPCKVN
                     SAVLVSGDVMTLKLRTPPTAKIGFFPGQYINLHYKGVTRSYSIANSDESNGIELHVRN
                     VPNGQMSSLIFGELQENTLMRIEGPCGTFFIRESDRPIIFLAGGTGFAPVKSMVEHLI
                     QGKCRREIYIYWGMQDSKDFYSALPQQWSEQHDNVHYIPVVSGDDAEWGGRKGFVHHA
                     VMDDFDSLEFFDIYACGSPVMIDASKKDFMMKNLSVEHFYSDAFTASK"
     gene            13016..13789
                     /gene="rfbF"
                     /locus_tag="MOX77_001139"
     CDS             13016..13789
                     /gene="rfbF"
                     /locus_tag="MOX77_001139"
                     /EC_number="2.7.7.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate cytidylyltransferase"
                     /protein_id="HCA3356734.1"
                     /translation="MKAVILAGGLGTRLSEETIVKPKPMVEIGGKPILWHIMKMYSVH
                     GIKDFIICCGYKGYVIKEYFANYFLHMSDVTFHMAENRMEVHHKRVEPWNVTLVDTGD
                     SSMTGGRLKRVAEYVKDDEAFLFTYGDGVADLDIKATIDFHKAHGKKATLTATFPPGR
                     FGALDIQAGQVRSFQEKPKGDGAMINGGFFVLNPSVIDLIDNDATTWEQEPLMTLAQQ
                     GELMAFEHPGFWQPMDTLRDKVYLEGLWEKGKAPWKTWE"
     gene            13794..14873
                     /gene="rfbG"
                     /locus_tag="MOX77_001140"
     CDS             13794..14873
                     /gene="rfbG"
                     /locus_tag="MOX77_001140"
                     /EC_number="4.2.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-glucose 4,6-dehydratase"
                     /protein_id="HCA3356735.1"
                     /translation="MIDKNFWQGKRVFVTGHTGFKGSWLSLWLTEMGAIVKGYALDAP
                     TVPSLFEIVRLNDLMESHIGDIRDFEKLRSSIAEFKPEIVFHMAAQPLVRLSYEQPIE
                     TYSTNVMGTVHLLEAVKQVGNIKAVVNITSDKCYDNREWVWGYRENEPMGGYDPYSNS
                     KGCAELVASAFRNSFFNPANYEQHGVGLASVRAGNVIGGGDWAKDRLIPDILRSFENN
                     QQVIIRNPYSIRPWQHVLEPLSGYIVVAQRLYTEGAKFSEGWNFGPRDEDAKTVEFIV
                     DKMVTLWGDDASWLLDGENHPHEAHYLKLDCSKANMQLGWHPRWGLTETLSRIVKWHK
                     AWIRGEDMLICSKREISDYMSATTR"
     gene            14900..16213
                     /gene="rfbH"
                     /locus_tag="MOX77_001141"
     CDS             14900..16213
                     /gene="rfbH"
                     /locus_tag="MOX77_001141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide biosynthesis protein RfbH"
                     /protein_id="HCA3356736.1"
                     /translation="MTANNLREQISQLVAQYANEALSPKPFVAGASVVPPSGKVIGAK
                     ELQLMVEASLDGWLTTGRFNDAFEKKLGEFIGVPHVLTTTSGSSANLLALTALTSPKL
                     GERALKPGDEVITVAAGFPTTVNPAIQNGLIPVFVDVDIPTYNIDASLIEAAVTEKSK
                     AIMIAHTLGNAFNLSEVRRIADKYNLWLIEDCCDALGTTYEGRMVGTFGDIGTVSFYP
                     AHHITMGEGGAVFTKSGELKKIIESFRDWGRDCYCAPGCDNTCGKRFGQQLGSLPQGY
                     DHKYTYSHLGYNLKITDMQAACGLAQLERVEEFVEQRKANFSYLKQGLQSCTEFLELP
                     EATEKSDPSWFGFPITLKETSGVNRVELVKFLDEAKIGTRLLFAGNLIRQPYFANVKY
                     RVVGELTNTDRIMNQTFWIGIYPGLTTEHLDYVVSKFEEFFGLNF"
     gene            16248..17087
                     /locus_tag="MOX77_001142"
     CDS             16248..17087
                     /locus_tag="MOX77_001142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000697757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-paratose synthase"
                     /protein_id="HCA3356737.1"
                     /translation="MKILIMGAFGFLGSRLTSYFESRHTVIGLARKRNNEATINNIIY
                     TTENNWIEKILEFEPNIIINTIACYGRHNEPATALIESNILMPIRVLESISSLDAVFI
                     NCGTSLPPNTSLYAYTKQKANELAAAIIDKVCGKYIELKLEHFYGAFDGDDKFTSMVI
                     RRCLSNQPVKLTSGLQQRDFLYIKDLLTAFDCIISNVNNFPKFHSIEVGSGEAISIRE
                     YVDTVKNITKSNSIIEFGVVKERVNELMYSCADIAELEKIGWKREFSLVDALTEIIEE
                     EGK"
     gene            17084..18100
                     /locus_tag="MOX77_001143"
     CDS             17084..18100
                     /locus_tag="MOX77_001143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000770936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-paratose 2-epimerase"
                     /protein_id="HCA3356738.1"
                     /translation="MKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHW
                     LSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGG
                     TLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDF
                     HSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEI
                     KNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLL
                     ELFKLLEDYCNIDMRFTNLPVRESDQRVFVADIKKITNAIDWSPKVSAKDGVQKMYDW
                     TSSI"
     gene            18171..19469
                     /locus_tag="MOX77_001144"
     CDS             18171..19469
                     /locus_tag="MOX77_001144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001228887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HCA3356739.1"
                     /translation="MRKLRLVRIPRHLIIAASSWLSKIIIAGVQLVSVKFLLEILGEE
                     SYAVFTLLTGLLVWFSIADIGIGSSLQNYISELKADRKSYDAYIKAAVHILFASLIIL
                     SSTLFFLSDKLSSLYLTSFSDELKNNSGSYFFIASILFIFIGVGSVVYKILFAELLGW
                     KANIINALSYLLGFLDVVAIHYLMPDSSITFALVALYAPVAILPIIYISFRYIYVLKA
                     KVNFNTYKLLLSRSSGFLIFSSLSIIVLQTDYIVMSQKLSAADIIKYTVTMKIFGLMF
                     FIYTAVLQALWPVCAELRVKMQWRKLHRIIFLNIIGGVFFIGLGTLFIYVLKDYIYSI
                     IANGIDYNISGVVFVLLAVYFSIRVWCDTFAMLLQSMNQLKILWLIVPCQALIGGVTQ
                     WYFAEHYGIVGILYGLILSFSLTVFWGLPVYYMYKSKRLA"
     gene            19471..20472
                     /locus_tag="MOX77_001145"
     CDS             19471..20472
                     /locus_tag="MOX77_001145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011233008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HCA3356740.1"
                     /translation="MKVSFCIPTYNRVKFIEDLLESINNQSSHSLIVEVCISDNASTD
                     GTEESINIWRDRFNFPILYQRHNENIGPDRNYLSAVNMGTGDYCWIFGSDDILTKNSL
                     ALMEDKLAAGSDIYLCDRRELDISMTKISNPHRRWLNGGSRLFSFSNEADLIEYFSKC
                     NSVGGLFSYLSSIIVKRNKWSDVLFDESYIGTAYAHVYILLRIINNMNSTLQYISLPL
                     VDCRGDNDTFESNGKARRIKIDFIGYLKLREDFYNNNTKIYISFGRVLTKERPWLYTS
                     LAMACYGDSTDRAELASFYKKLGYPKIATNLIFCLKGLASYTKKIKLAKMVIKKIFS"
     gene            21047..22108
                     /locus_tag="MOX77_001146"
     CDS             21047..22108
                     /locus_tag="MOX77_001146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HCA3356741.1"
                     /translation="MIVNLSRLGKSGTGMWQYSIKFLTALREIADVDAIICSKVHADY
                     FEKLGYAVVTVPNIVSNTSKTSRLRPLVWYVYSYWLALRVLIKFGNKKLVCTTHHTIP
                     LLRNQTITIHDIRPFYYPDSLIQKVYFRFLLKMSVKRCKHVLTVSYTVKDSIAKTYNV
                     DSEKISVIYNSVSKSDFIQKKEKENYFLAVGASWPHKNIHSFIKNKKVWSDSYNLIIV
                     CGRTDYAMSLQQMVVDLKLTDKVTFLHEVSFNELKVLYSKAYALVYPSIDEGFGIPPI
                     EAMASNTPVIVSDIPVFHEVLTNGALYVNPDDEKSWQSAIENIGQLPDAISRFNNYVA
                     RYDFDNMKQMVGNWLAESK"
     gene            22109..23053
                     /gene="rfbN"
                     /locus_tag="MOX77_001147"
     CDS             22109..23053
                     /gene="rfbN"
                     /locus_tag="MOX77_001147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O antigen biosynthesis rhamnosyltransferase
                     RfbN"
                     /protein_id="HCA3356742.1"
                     /translation="MKITLIIPTYNAGSLWPNVLDAIKQQTIYPDKLIVIDSGSKDET
                     VLLASDLKNISIFNIDSKDFNHGGTRNLAVTKTLDADVIIFLTQDAILADSDAIKNLV
                     YYFSDPLIAAVCGRQLPHKDANPLAVHARNFNYSSKSIVKSKADIEKFGIKTVFMSNS
                     FAAYRRSVFEELSGFPEHTILAEDMFMAAKMIQAGYKVAYCAEAVVRHSHNYTPREEF
                     QRYFDTGVFHACSPWIQRDFGGAGGEGFRFVKSEIQFLLKNAPFWIPRALLTTFAKFL
                     GYKLGKHWQSLPLSTCRYFSMYKSYWNNIQYSSSKEIK"
     gene            23054..24493
                     /locus_tag="MOX77_001148"
     CDS             23054..24493
                     /locus_tag="MOX77_001148"
                     /EC_number="2.7.7.13"
                     /EC_number="5.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-1-phosphate
                     guanylyltransferase/mannose-6-phosphate isomerase"
                     /protein_id="HCA3356743.1"
                     /translation="MSFLPVIMAGGTGSRLWPLSREYHPKQFLSVEGKLSMLQNTIKR
                     LASLSTEEPVVICNDRHRFLVAEQLREIDKLANNIILEPVGRNTAPAIALAAFCALQN
                     ADNADPLLLVLAADHVIQDEIAFTKAVRHAEEYAANGKLVTFGIVPTHAETGYGYIRR
                     GELIGNDAYAVAEFVEKPDIDTASDYFKSGKYYWNSGMFLFRASSYLNELKYLSPEIY
                     KACEKAVGHINPDLDFIRIDKEEFMSCPSDSIDYAVMEHTQHAVVIPMSAGWSDVGSW
                     SSLWDISNKDHQRNVLKGDIFAHACNDNYIYSEDMFISAIGVSNLVIVQTTDALLVAN
                     KDTVQDVKKIVDYLKRNDRNEYKQHQEVFRSWGKYNVIDSGKNYLVRCITVKPGEKFV
                     AQMHHHRAEHWIVLSGTARVTKGEQIYMVSENESTFIPPDTIHALENPGMIPLQLIEI
                     QSGTYLGEDDIIRLEQRSGFSKEWTNERS"
     gene            24480..25913
                     /gene="rfbK"
                     /locus_tag="MOX77_001149"
     CDS             24480..25913
                     /gene="rfbK"
                     /locus_tag="MOX77_001149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001103634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen biosynthesis phosphomannomutase RfbK"
                     /protein_id="HCA3356744.1"
                     /translation="MNVVNNSRDVIHSSGIVFGTSGARGLVKDFTPQVCAAFTVSFVA
                     VMQEHFSFDTVALAIDNRPSSYGMAQACAAALADKGVNCIFYGVVPTPALAFQSMSDN
                     MPAIMVTGSHIPFERNGLKFYRPDGEITKHDEAAILSVEDTCSHLELKELIVSEMAAV
                     NYISRYTSLFSTPFLKNKRIGIYEHSSAGRDLYKPLFIALGAEVISLGRSDNFVPIDT
                     EAVSKEDREKARSWAKEFDLDAIFSTDGDGDRPLIADEAGQWLRGDILGLLCSLALGA
                     EAVAIPVSCNSIISSGRFFKHVKLTKIGSPYVIEAFNELSRSYSRIVGFEANGGFLLG
                     SDICINEQNLHALPTRDAVLPAIMLLYKSRNISISALVNELPTRYTHSDRLQGITTDK
                     SQSLISMGRENLSNLLSYIGLENEGAISTDMTDGMRITLRDGCIVHLRASGNAPELRC
                     YAEANLLNRAQDLVNITLANIKKRCLP"
     gene            25985..27415
                     /locus_tag="MOX77_001150"
     CDS             25985..27415
                     /locus_tag="MOX77_001150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-phosphate galactose
                     phosphotransferase WbaP"
                     /protein_id="HCA3356745.1"
                     /translation="MDNIDNKYNPQLCKIFLAISDLIFFNLALWLSLGCVYFTFDQVQ
                     RFIPQDQLDTRVITHFILSVVCVGWFWIRLRHYTYRKPFWYELKEIFRTIVIFAIFDL
                     ALIAFTKWQFSRYVWVFCWTFAIILVPFFRALTKHLLNKLGIWKKKTIILGSGQNARG
                     AYSALQSEEMMGFDVIAFFDTDASDAEINMLPVIKDTGTIWDLNRTGDVHYILAYEYT
                     ELEKTHFWLRELSKHHCRSVSVVPSFRGLPLYNTDMSFIFSHEVMLLRIQNNLAKRSS
                     RFLKRTFDIVCSIIILIIASPLMIYLWYKVTRDGGPAIYGHQRVGRHGKLFPCYKFRS
                     MVMNSQEVLKELLANDPIARAEWEKDFKLKNDPRITAVGRFIRKTSLDELPQLFNVLK
                     GDMSLVGPRPIVSDELERYCDDVDYYLMAKPGMTGLWQVSGRNDVDYDTRVYFDSWYV
                     KNWTLWNDIAILFKTAKVVLRRDGAY"
     gene            27579..28985
                     /gene="gndA"
                     /locus_tag="MOX77_001151"
     CDS             27579..28985
                     /gene="gndA"
                     /locus_tag="MOX77_001151"
                     /EC_number="1.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent phosphogluconate dehydrogenase"
                     /protein_id="HCA3356746.1"
                     /translation="MSKQQIGVVGMAVMGRNLALNIESRGYTVSVFNRSREKTEEVIA
                     ENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAGTDAAIDSLKPYLEKGDIIIDGGN
                     TFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKDAYELVAPILTKIA
                     AVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLSNEELANT
                     FTEWNNGELSSYLIDITKDIFTKKDEDGNYLIDVILDEAANKGTGKWTSQSALDLGEP
                     LSLITESVFARYISSLKAQRVAASKVLSGPKAQPAGDKAEFIEKVRRALYLGKIVSYA
                     QGFSQLRAASDEYHWELNYGEIAKIFRAGCIIRAQFLQKITDAYAENAGIANLLLAPY
                     FKKIADEYQQALRDVVAYAVQNGIPVPTFSAAVAYYDSYRAAVLPANLIQAQRDYFGA
                     HTYKRTDKEGIFHTEWLE"
     gene            29222..30388
                     /gene="ugd"
                     /locus_tag="MOX77_001152"
     CDS             29222..30388
                     /gene="ugd"
                     /locus_tag="MOX77_001152"
                     /EC_number="1.1.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 6-dehydrogenase"
                     /protein_id="HCA3356747.1"
                     /translation="MKITISGTGYVGLSNGLLIAQHHDVVALDIVPARVELLNDRISP
                     IVDKEIQQFLKEDNIRFRATLDKFDAYQNADYVIIATPTDYDPKTNYFNTFSVESVIQ
                     DVISINPAAVMIIKSTVPVGFTAAMRQKFATENIIFSPEFLREGKALYDNLYPSRIVI
                     GEQSERAREFAALLQEGAIKQEIPTLFTDSTEAEAIKLFANTYLAMRVAYFNELDSYA
                     ETLGLNTRQIIEGVCLDPRIGNHYNNPSFGYGGYCLPKDTKQLLANYQSVPNNIISAI
                     VEANRTRKDFIADSILARKPKVVGIYRLIMKSGSDNFRASSIQGIMKRIKAKGVEVII
                     YEPVMQEETFFNSRLERDLHCFKQQADVIISNRMAAELLDVAEKVYTRDLFGSD"
     gene            30531..31514
                     /gene="wzzB"
                     /locus_tag="MOX77_001153"
     CDS             30531..31514
                     /gene="wzzB"
                     /locus_tag="MOX77_001153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS O-antigen chain length determinant protein
                     WzzB"
                     /protein_id="HCA3356748.1"
                     /translation="MTVDSNASSGRGNDPEQIDLIELLLQLWRGKMTIIVAVIIAILL
                     AVGYLMIAKEKWTSTAIITQPDAAQVATYTNALNVLYGGNAPKISEVQANFISRFSSA
                     FSALSEALDNQKEREKLTIEQSVKGQTLPLSVSYVSTTAEGAQRRLAEYIQQVDEEVA
                     KELEVDLKDNITLQTKTLQESLETQEVVAQEQKDLRIKQIEEALRYADEAKITQPQIQ
                     QTQDVTQDTMFLLGSDALKSMIQNEATRPLVFSPAYYQTKQTLLDIKNLKVTADTVHV
                     YRYVMKPTLPVRRDSPKTAITLVLAVLLGGMIGAGIVLGRNALRSYKPKAL"
     gene            complement(31595..32206)
                     /locus_tag="MOX77_001154"
     CDS             complement(31595..32206)
                     /locus_tag="MOX77_001154"
                     /EC_number="3.5.4.19"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphoribosyl-AMP
                     cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE"
                     /protein_id="HCA3356749.1"
                     /translation="MLTEQQRRELDWEKTDGLMPAIVQHAVSGEVLTLGYMNPQALDK
                     TIESGHVTFFSRTKQRLWTKGETSGHVLNVVSIAPDCDNDTLLVLANPVGPTCHKGTS
                     SCFGDASHQWLFLYQLEQLLAERKTADPASSYTAKLYASGTKRIAQKVGEEGVETALA
                     ATVNDRFELTNEASDLMYHLLVLLQDQDLNLTTVIDDLRKRHQ"
     gene            complement(32200..32976)
                     /gene="hisF"
                     /locus_tag="MOX77_001155"
     CDS             complement(32200..32976)
                     /gene="hisF"
                     /locus_tag="MOX77_001155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HCA3356750.1"
                     /translation="MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYADEGA
                     DELVFYDITASSDGRVVDKSWVARVAEVIDIPFCVAGGIRSIDDAAKILSFGADKISI
                     NSPALADPTLITRLADRFGVQCIVVGIDTWFDDATGKYHVNQYTGDENRTRVTQWETL
                     DWVQEVQQRGAGEIVLNMMNQDGVRNGYDLTQLKKVRDVCRVPLIASGGAGTMEHFLE
                     AFRDADVDGALAASVFHKQIINIGELKAYLAGQGVEIRIC"
     gene            complement(32958..33695)
                     /gene="hisA"
                     /locus_tag="MOX77_001156"
     CDS             complement(32958..33695)
                     /gene="hisA"
                     /locus_tag="MOX77_001156"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HCA3356751.1"
                     /translation="MIIPALDLIDGTVVRLHQGDYARQRDYGNDPLPRLQDYAAQGAG
                     VLHLVDLTGAKDPAKRQIPLIKTLVAGVNVPVQVGGGVRTEEDVAALLKAGVARVVIG
                     STAVKSPDVVKGWFERFGAQALVLALDVRIDEHGNKQVAVSGWQENSGVSLEQLVETY
                     LPVGLKHVLCTDISRDGTLAGSNVSLYEEICARYPQIAFQSSGGIGDIDDIAALRGTG
                     VRGVIVGRALLEGKFTVKEAIQCWQNV"
     gene            complement(33695..34285)
                     /gene="hisH"
                     /locus_tag="MOX77_001157"
     CDS             complement(33695..34285)
                     /gene="hisH"
                     /locus_tag="MOX77_001157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005128083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HCA3356752.1"
                     /translation="MNVVILDTGCANLSSVKSAVARHGYTPVVSREAEIVLRADKLFL
                     PGVGTAQAAMDQLRERELIDLIKACTQPVLGICLGMQLLGRRSEETRGVDLLNIIEQD
                     VPKMTDFGLPLPHMGWNRVYPQAGNRLFQGIEDGAYFYFVHSYAMPVNPWTIAQCNYG
                     EPFTAAVQKDNFFGVQFHPERSGAAGAQLLKNFLEM"
     gene            complement(34285..35352)
                     /gene="hisB"
                     /locus_tag="MOX77_001158"
     CDS             complement(34285..35352)
                     /gene="hisB"
                     /locus_tag="MOX77_001158"
                     /EC_number="3.1.3.15"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     histidinol-phosphatase/imidazoleglycerol-phosphate
                     dehydratase HisB"
                     /protein_id="HCA3356753.1"
                     /translation="MSQKYLFIDRDGTLISEPPSDFQVDHFDKLAFEPEVIPVLLKLQ
                     KAGFKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVCFDEVLICPHLPADDCD
                     CRKPKVKLVERYLAEQAMDSANSYVIGDRATDIQLADNMGITGLRYHRETLNWTMIGE
                     QLTKRDRYAHVVRNTKETQIDVSVWLDREGNSKINTGVGFFDHMLDQIATHGGFRMEI
                     TVKGDLYIDDHHTVEDTGLALGEALKLALGDKRGICRFGFVLPMDECLARCALDISGR
                     PHLEYKAEFTYQRVGDLSTEMIEHFFRSLSYTMGVTLHLKTKGKNDHHRVESLFKAFG
                     RTLRQAIRVEGDTLPSSKGVL"
     gene            complement(35349..36428)
                     /gene="hisC"
                     /locus_tag="MOX77_001159"
     CDS             complement(35349..36428)
                     /gene="hisC"
                     /locus_tag="MOX77_001159"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HCA3356754.1"
                     /translation="MSTENTLSVADLARENVRNLVPYQSARRLGGNGDVWLNANEFPT
                     AVEFQLTQQTLNRYPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELVIRAFCEPG
                     KDAILYCPPTYGMYSVSAETIGVERRTVPALENWQLDLQGISDNLDGAKVVFVCSPNN
                     PTGQLINPQDLRTLLELTRGKAIVVADEAYIEFCPQATLAGWLVKYPHLVILRTLSKA
                     FALAGLRCGFTLANEEVINLLLKVIAPYPLSTPVADIAAQALSPQGINVMRDRVAQTV
                     QERQYLVNALQQTACVEHVFDSETNYILARFTASSSVFKSLWDQGIILRDQNKQPSLS
                     GCLRITVGTRQENQRVIDALRAEPV"
     gene            complement(36425..>36809)
                     /locus_tag="MOX77_001160"
     CDS             complement(36425..>36809)
                     /locus_tag="MOX77_001160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HCA3356755.1"
                     /translation="IVTKDLAQCVAISNQYGPEHLIIQTRNARDLVDAITSAGSVFLG
                     DWSPESAGDYASGTNHVLPTYGYTATCSSLGLADFQKRMTVQELSKAGFSALASTIET
                     LAAAERLTAHKNAVTLRVNALKEQA"
BASE COUNT         9773 a         7643 c         9026 g        10367 t
ORIGIN      
        1 ggacggcctc agcatgtcgt tcgccgactg gcgtttcaac ctgcgctcgt cgaacaccga
       61 accggtggtg cgcctgaatg tggaatcacg cggcgatatt ccgctgatgg aagcgcgaac
      121 acgcactctg ctggcgctgc tgaatcagta acgtcagatc tccccttacc gcctgcgggt
      181 aaggggccaa tcacaggaac aacgatgaca aatctaaaaa agcgcgaacg agccaaaacc
      241 aatgcatcgt taatctctat ggtgcaacgc ttttcagata tcaccatcat gtttggcggg
      301 ctgtggttca tctgtgaagt cagtggactg ccattcctgt acatgcacct gttggtggcg
      361 ctgattacgc tggttgtttt tcaaatgctg ggcgggatga ccgattttta tcgctcctgg
      421 cgcggcgtca aaatgtcgac agagttaacg ctgttactgc aaaactggac gctgagcctg
      481 atcttcagcg ccggtctggt ggcgtttaat gatgactttg acaaccgcct cgccacctgg
      541 ttggcctggt atgcgctgtc cagcctgggc ttagtgttat gccgttcatt tattcgtttc
      601 ggcgcgggct ggctacgcaa tcgtggttat aacactcgcc ggggcgccgt cgccggggat
      661 ttgcctgcgg gccaggcgtt gctggatagc ttccgtaatg agccgtggct gggttttgag
      721 gtggtgggcg tctatcacga tcctaaaccg ggcggcgtct ctgctgactg ggccgggaac
      781 ttcgaacagt taattgacga tgcgaaagcc tcgcgaattc acaatgttta tatcgccatg
      841 tcaatgagcg acggcgccat ggtgaaaaaa ctggtgcgcg agctggccga caccacctgc
      901 tcggtgatcc ttattcccga tgtgttcacc tttaatattc tccactcgcg cgtggaggag
      961 atgagcggcg ttccggtcgt tccgctgtat gacacgccgc tatcagggat taaccgtctg
     1021 cttaaacggg cagaagatat cgtgctggcg tcgctgattc tgctgctcat ctcaccggta
     1081 ctgtgctgca ttgcgccggc ggtcaaattg agctcgcccg ggccggtgat tttccgtcag
     1141 acgcgctacg ggatggacgg caagccgagc aaagtctgga ggttccgctc aatgaaggtg
     1201 atggagaacg ataaggtcgt tacccaggcg acgcaaaacg atccgcgcgt cacccgggta
     1261 ggtaactttt tgcgtcgtac ctcgctggat gaattaccgc agtttatcaa cgtattaacc
     1321 ggcgggatgt ctatcgtcgg tcctcgcccg cacgcggtgg cgcataacga acagtatcgt
     1381 cagttgattg aaggttacat gctacgccac aagatgaagc cgggcatcac cggctgggcg
     1441 caaattaatg gctggcgcgg tgagaccgat acgctggaga aaatggaaaa acgcgtggaa
     1501 ttcgacctgg aatacatccg cgaatggagt atttggttcg atatcaaaat cgtttttctg
     1561 acgattttta aagggtttgt taataaagcg gcgtattaag aacctgaccc acaaggctat
     1621 tttacttgcc atattgcacc agggcagtgc tcaatctggc tgcgccaatg acgccttgtg
     1681 aacaggttct ggagaaaaga atgagtttac gacaaaaaac gatcagcggc gttaaatggt
     1741 cggctatcgc cacgatagtg attatcggtc tggggttaat tcagatgacg gtgctggcgc
     1801 ggatcatcga caaccaccag tttggcctgt tgaccgtatc gctggtgatt atcgcgctgg
     1861 ccgacacgat ttcggacttt ggcatcgcga actcgattat ccagcgtaaa acgattgggc
     1921 atctggagct gaccacgctt tactggctaa acgttgggct tgggattgtg gtatttgcgg
     1981 tggtcttttg gctgagcgat gcgattgccc atgttttgca taacccggat ctcgcgccgt
     2041 taatcaaaac gttgtcgctg gcgttcatcg tgatccctca cgggcagcag ttccgcgcgc
     2101 tgatgcaaaa agagctggag ttcaataaga tcggcatgat cgaaacgacc tccgtgctgg
     2161 cggggttcac ctttacggtg attagcgccc attactggcc gctggcgtta accgcgattc
     2221 tcggctatct ggtgaacagc gcggtgcgaa cgctgctgtt tggttacttt ggccgcaaga
     2281 tttaccgtcc ggggctgcat ttttcgctgg catcggtgtc cacgaacctg cgttttggcg
     2341 cgtggctgac ggcggacagt atcgtcaatt acatcaacac gaatttatcg acgctggtac
     2401 tggcgagaat tctcggcgca agcgtcgccg ggggatataa cctcgcgtac aacgtggctg
     2461 ttgtgccgcc ggcgaagctt aaccccatca ttactcgcgt gctatttccg gcattcgcca
     2521 aaatccagga cgataccgag aagctgcgcg tcaacttcta taagttgctt tccgtggtgg
     2581 gaattatcaa ttttcccgcg ctgttgggcc tgatggtagt ggcgaacaat tttgtgccgt
     2641 tagtgtttgg tgagaagtgg aacagcatta tcccgatcct gaaattgctg tgcgttgtgg
     2701 ggctgctgcg ctcagtcggc aacccgattg gttcgctgct gatggcgaaa gcgcgcgtgg
     2761 atatcagctt taagttcaac gtctttaaaa cgtttctgtt tatcccggca attctcattg
     2821 gcggccatct ggcgggggcg attggcgtga cgctggggtt cctggtggtg caaatcatca
     2881 acaccattct gagctatttc gtgatgatta agccggtact cggctccagc taccgtcagt
     2941 atattctcag cctgtggcta ccgttttatc tctcattgcc cacatttatt accagctacg
     3001 gcgcaggaaa gctagtcgac ggctatttac cgttgtcagg ggtattcgcg ctacaggttg
     3061 tggtcggtat tttgagtttt attttaatga ttattttttc acgcaatgcg ctggtgatgg
     3121 aaattaaaaa tcagcttgtt ggcagtgaaa aaatgaaaaa gttattacgt gtcggatgac
     3181 gaggatataa gaggctattt atgaaattat taattttagg caaccacaca tgcggcaacc
     3241 gtggtgatag cgccattatg cgcggtttgc ttgatgccat ccgtcaacag gcgccagagg
     3301 cggagatgga tgtgatgagc cgtttcccgg tgagttcctc ctggttgcag gggcgaccga
     3361 ttattgccga cccgctgtat caattaagcc agaaacagca ggcggcggca gggcttaacg
     3421 gtcgggtgaa aaagtattac gccgtcgttt tcagcataaa attttattgt ctaaagtcgc
     3481 ccaggaagga tcgctgcgta attttgctat cgcgccggaa tttgccgaat tcgcgcaatt
     3541 tattgcgcag tatgacgccg tcattcaggt gggcggttca aactatgtcg acttatacgg
     3601 tttgactcac tttgaatatc cgctgtgcgc gtttatggcg aacaaaccaa tttatatggt
     3661 gggacatagc gtcggccctt tccagaaccc tgactttaac tagctcgcca attatgtttt
     3721 gggcgcacca gtgcgctgat cctgcgtgaa accgtcagcc gcgatctgat gaccgccgcg
     3781 cagatcgata cccgaaaagt agagcagggg gtggataccg cctggttagt cgaacgccgt
     3841 cacgacgagt ttgtcgccag ttatgctgtg cagcactggc tggacgtcac cgcgcgccgc
     3901 aaaaccgtcg cgattacgtt gcgcgatctg gagccgtttg ataaacgcct gggcaccact
     3961 cagcaggcct atgagcaggc atttgcccag gtcgtgaatc gcctgattgc ggacggttat
     4021 caggtactgg cgctgtcgac ctgcaccagt atcgatcgct ataaccgcga tgaccggatg
     4081 gttgcgttac ggatggcgaa gtatgtaaac gactcagagc atttccatat cgcgatggac
     4141 gaactcaatg acgtggaaat cggaaagatc ctcgcatcct gcgtactgac catcgggacg
     4201 cgcctgcatt ccgccattat ctccatgaat tttggcacgc ccgctatcgc cattaattat
     4261 gaacataaat ccgccgggat tatgcagcag ctaggcctgg cggaattggc catcgatatc
     4321 cgtcacttgc tgaacggttc attacaaagc gtggtggccg atacgctcaa tcaattgcct
     4381 gcgctaaagg caaaagtggc taacgccgtc accgaggagc gggcgaaagg gttcacgatg
     4441 atcaaatctg ctctcgacag aattcgggag gcgcaatgaa agtcagcttt tttctgctga
     4501 aatttccact ctcatcggaa acctttgtgc tgaatcagat tactgcgttt attgatatgg
     4561 gccatgaggt ggagattgtc gcgttacaaa aaggcgatac ccaacatact cacgccgcct
     4621 gggagaagta tggcctggcg gcgaaaaccc gctggttaca ggatgagccc cagggacggc
     4681 tggcgaagct gcgctaccgg gcatgtaaaa cgctgccggg gctgcatcgg gcggcgacct
     4741 ggaaagcgct caattttacc cgctacggcg atgaatcacg caatttgatc ctttccgcga
     4801 tttgcgcgca ggcgggccaa ccttttgtgg cggatgtgtt catcgcgcac tttggtccgg
     4861 cgggcgtgac ggcggccaaa ctgcgcgaac tgggcgtgct tcgcggcaaa atcgagacta
     4921 ttttccacgg aattgatatt tccagtcgcg aggtgctcag tcattacacg ccggagtatc
     4981 agcagttgtt tcgtcgtggc gatctgatgc tgcccatcag cgatctgtgg gccggtcgcc
     5041 tgaaaagtat gggctgtccg ccggaaaaga ttgccgtttc gcgcatgggc gtcgacatga
     5101 cgcgtttttc ccatcgtccg gtgaaagcgc cagggatgcc gctggagatg atttccgtcg
     5161 cgcgcctgac cgagaaaaaa ggcctgcatg tggcgattga agcctgtcgg caactgaaag
     5221 cgcagggcgt ggcgtttcgc taccgcattc tggggattgg cccgtgggaa cgtcggctgc
     5281 gcacgctcat tgagcagtat cagttagagg atgtcattga gatgccgggt tttaaaccga
     5341 gccatgaagt gaaggcgatg ctggatgacg ccgatgtttt tttgctgccg tcgattaccg
     5401 gtacggatgg cgatatggaa ggtattccgg tagcgctgat ggagacgatg gcggtgggga
     5461 ttcccgtggt gtctaccgtg catagcggta ttccggaact ggtggaggcc ggcaaatccg
     5521 gctggctggt accggaaaac gatgcgcagg cgctggcggc ccgactcgct gagttcagcc
     5581 ggattgacca cgatacgctg gggtcggtga tcatgcgcgc tcgtgaaaaa gtggcgcaag
     5641 attttaatca gcaggcgatt aatcgccagt tagccagcct gctacaaacc atataaacga
     5701 ggtggtatgc ccgcgactaa attctcccga cgtaccctcc tgacggcagg ttccgcgctt
     5761 gctgttcttc cttttctgcg cgccttgccg gtacaggcgc gtgaacctcg ccagaccgtc
     5821 gatattaagg attatccggc ggatgacggt atcgcctcgt tcaaacaggc cttcgccgac
     5881 gggcagactg tggtcgtgcc gtcaggatgg gtgtgtgaaa atatcaatgc ggcgataacg
     5941 attccggcgg gaaaaacgct gcggatacag ggcgcggtgc gtgggaatgg ccggggacgg
     6001 tttattttgc tggacgggtg tcaggtggtg ggggagcagg gcggcagtct gcacaatgtg
     6061 acgctggatg ttcgcgggtc ggactgtgtg attaaaggcg tgacgatgag cggctttggc
     6121 cccgtcgcgc aaattttcat cggcggtaag gaaccgcagg tgatgcgtaa tctcattatc
     6181 gatgacatca ccgttaccca cgccaactac gccattctcc gccagggatt tcataaccaa
     6241 atggacggcg cgcggattac gcatagtcgc tttagcgatt tgcaggggga cgccattgag
     6301 tggaatgtcg cgattcatga ccgcgacatc ctgatttccg atcatgtcat cgaacgcatt
     6361 gattgtacca atggcaaaat caactggggg atcggcatcg ggctggcggg tagcgcctat
     6421 gacaatagtt atcctgaaga ccaggcagta aaaaactttg tggtggccaa tattaccgga
     6481 tctgattgcc gacaactggt acacgtagaa aatggcaaac atttcgtcat tcgcaatgtc
     6541 aaagccaaaa acatcacgcc cgatttcagt aaaaatgcgg gtattgataa cgcaacgatc
     6601 gccatttatg gctgtgataa tttcgtcatt gataatattg atatgacgaa tagtgccggg
     6661 atgctcatcg gctatggcgt cgttaaagga aaatacctgt caattccgca aaactttaaa
     6721 ttaaacgcta ttcggttgga taatcgccag gttgcttata aattacgcgg cattcaaatt
     6781 tcctccggta acgccccctc atttgttgcc atcaccaatg tacggatgac gcgtgctacg
     6841 ctggaactgc ataatcaacc gcagcacctc tttttgcgta atatcaacgt gatgcaaact
     6901 tcagcgattg gcccggcgtt aaaaatgcat tttgatttgc gtaaagatgt ccgtggtcaa
     6961 tttatggccc gccaggacac gctgctttcc ctcgctaatg ttcatgccat caatgaaaac
     7021 gggcagagtt ccgtggatat cgacaggatt aatcaccaaa ccgtgaatgt cgaagcagtg
     7081 aatttttcgc tgccgaagcg gggagggtaa gtaccgctat ttttacgaaa attcctggga
     7141 aaaagttgtt catacttaat gttatggtgc cgactaagac gtaatgtaga gcgtgccatc
     7201 attatccctg gcagcagagt aattcatgct ggcgaaaaca agctaaagag ctataattca
     7261 gcaaccattt tacaggtgga agaaacaatg atgaatttga aagcagttat accggtagcg
     7321 ggtttgggta tgcatatgtt gcctgccacc aaggcaatcc caaaagagat gctaccgatc
     7381 gtcgacaaac cgatgattca gtacattgtc gatgagattg tggctgcagg gatcaaagaa
     7441 atcgtgctgg tgactcacgc gtctaaaaat gccgttgaga accacttcga cacctcttat
     7501 gaacttgaat cgcttcttga gcagcgcgtt aagcgtcagc ttctggcgga agtgcaatct
     7561 atctgcccac cgggcgtgac gattatgaac gttcgccagg cgcagccgtt aggactgggg
     7621 cactctattc tgtgcgcgcg tccggttgtg ggcgataacc ctttcattgt ggtactcccg
     7681 gatattatta ttgatgatgc taccgccgat ccgctgcgct ataaccttgc ggcgatggtg
     7741 gcgcgtttca atgaaacggg tcgcagccag gtgctggcaa agcgcatgaa aggtgattta
     7801 tcggagtatt ccgttatcca gacgaaagaa cctctggata atgaaggcaa agtcagccgg
     7861 attgtggagt ttatcgaaaa accggatcag ccgcagacgc tggattccga tttgatggcg
     7921 gtaggccgtt atgtgctttc agccgacatc tgggcggaac tggaaagaac cgaaccgggc
     7981 gcctggggcc gcatccagct taccgatgcg attgctgaac tggcgaaaaa acagtcggtt
     8041 gacgcgatgc taatgacggg cgacagctat gactgcggta aaaaaatggg ctacatgcag
     8101 gcatttgtga agtacgggct gcgcaacctg aaagaaggag cgaagttccg taagagcata
     8161 gagcagcttc tgcatgaata agtattaaca accgtgataa atggttggtg ataaacataa
     8221 taacggcagt gaacattcga agcggcaagt tggctgaaac gagtgttgac tgccgtttta
     8281 gttttgtata aagggcttaa gtaacaaggg gttatctgga gcattttaat gctgatttta
     8341 taagattaat ccttgtttcc ggatgcaatt aataagacaa ttagcgttta agttttagtg
     8401 agctttgccc tgctgggcga ggtttgtaac aagtcgatat gtacgcagtg cactggtagc
     8461 tgatgaacca ggggcggtag cgtgtgtaac gacttgagca attaattttt attggcaaat
     8521 taaataccac attaaatacg ccttatggaa tagaaaagtg aagatactta ttactggcgg
     8581 ggcaggtttt attggatcag ctgttgttcg ccatattatt aagaatacac aggacactgt
     8641 agttaatatt gataaattaa cctacgccgg taatcttgaa tccctttctg atatttctga
     8701 aagtaatcgc tacaattttg aacacgcgga tatttgtgat tccgctgaaa taacgcgtat
     8761 ttttgagcag taccagccgg acgcggtgat gcatttggct gcggaaagtc atgtggaccg
     8821 ttcgattacc gggccggcag catttattga aaccaatatc gtcggcacct atgtacttct
     8881 tgaagttgcg cgtaaatact ggtctgcgct tggcgaagat aaaaaaaata attttcgttt
     8941 tcatcatatt tccactgatg aagtttacgg cgatttacca catcctgatg aagttgaaaa
     9001 cagcgttacg ttgccgttat ttactgaaac gacggcatat gcgccaagta gcccctattc
     9061 tgcgtcaaaa gcatccagcg atcatttagt ccgtgcctgg cggcgtacct atggtctacc
     9121 aacgatcgtt accaattgtt ctaataacta tggcccttat cacttccctg aaaaactgat
     9181 tccgttggtc attttgaacg cactggaagg aaagcctttg ccaatttatg gcaaagggga
     9241 tcagattcgc gattggctat atgtagaaga tcacgctcgc gcgcttcata tggtagtgac
     9301 tgaaggcaag gcaggggaga cttataacat tggtggccac aatgagaaga aaaatctcga
     9361 tgtggtattt accatctgtg atctgctgga tgagattgta cccaaagcga cttcttatcg
     9421 tgaacaaatc acttatgtcg cggatcgtcc gggccatgat cgtcgttatg ccattgatgc
     9481 aggtaaaatt agccgtgaat taggctggaa accgctggag acctttgaaa gcggtattcg
     9541 taaaacagtg gaatggtacc ttgcaaatac tcaatgggta aacaatgtta aaagtggggc
     9601 gtatcagagt tggatagaac agaactatga aggacgccag taatgaatat cttacttttt
     9661 ggtaagacag ggcaagtagg ctgggagttg caacgttctc tggcgccagt ggggaatctg
     9721 attgccctgg atgtccattc aaaagagttt tgcggtgatt ttagtaatcc gaaaggcgtt
     9781 gccgaaaccg ttcgtaagct tcgtcccgat gtgattgtta acgcagcagc acatactgca
     9841 gtagataaag cagagtctga accagaactg gcgcagttgc ttaacgccac cagtgtggaa
     9901 gccatcgcta aagcggccaa cgaaattggc gcatgggtag tgcattattc aaccgattat
     9961 gtatttcctg gtaccggcga tatcccatgg caggaaacgg acgctacgtc gccgctgaat
    10021 gtctatggca agaccaaact agcgggagaa aaggccctgc aggataactg ccctaaatac
    10081 ctaatcttcc gcaccagttg ggtttatgca ggtaagggca ataatttcgc aaagacaatg
    10141 cttcgtctgg cgaaagagcg tcagacactt tcagtcatca acgatcagta cggtgcgcca
    10201 accggtgcgg aattactggc tgactgcacg gctcatgcga tccgtgtgac attaaataaa
    10261 ccagaagtcg caggtcttta ccatctggtt gccgggggaa ctacaacctg gcatgactac
    10321 gcggcgttag tctttgacga ggcgcgcaaa gcagggataa cgcttgcgct gactgagctt
    10381 aatgctgtgc cgaccagcgc ctacccgacg ccggcgagca gacctggtaa ttcgcgtctc
    10441 aatactgaaa agtttcagcg taattttggc cttattctgc cgcaatggga attaggagtt
    10501 aagcgtatgc tgactgaaat gtttacgacg acaaccatct gataaattta aatgcccata
    10561 agggcatttt ctatgaatga gaaatggaaa tgaaaacgcg taagggcatt attttagcgg
    10621 gaggctccgg cactcgtctt tatccggtga ccatggcggt aagtaagcaa ttgctaccaa
    10681 tttatgataa accgatgatt tactatcccc tttccacact tatgctggca ggcattcggg
    10741 atatcctgat catcagtacg ccacaggaca cgccgcgttt tcaacaactg ctgggagacg
    10801 gcagccaatg ggggctgaat cttcaatata aagtacagcc aagtccggat ggcttagcac
    10861 aggcgtttat tattggtgaa gagttcattg gtaataatga ttgtgcatta gtgctgggtg
    10921 acaatatctt ctatggtcat gatttaccaa agttaatgga agctgccgtt aataaagaaa
    10981 gtggtgctac cgtcttcgct tatcatgtaa acgatccaga gcgctacggt gtggttgagt
    11041 ttgaccaaaa tggcacagcc gttagtctgg aggaaaaacc gttacaaccg aagagtaatt
    11101 acgcggtaac ggggctgtat ttttatgata atagcgtggt ggagatggcg aaaaatctta
    11161 agccttcctc tcgcggtgag ttagaaatca cggatattaa ccgtatctat atggatcagg
    11221 gaagattgtc tgtcgctatg atggggcgcg gttatgcctg gctggatacg ggaacgcatc
    11281 agagtttgat agaggccagt aattttattg caaccatcga agaacgccag ggtctgaaag
    11341 tgtcttgccc ggaagagatc gcatttcgta aaaattttat aaatgcacaa caggttataa
    11401 aactggccgg gccattatca aaaaatgatt acggcaaata tttgctgaag atggtgaaag
    11461 gtttataagt gatgattgtg attaaaacag caataccaga tgtcttgatc ttagagccta
    11521 aagtttttgg cgatgagagg ggattctttt ttgaaagtta taaccagcag acctttgaag
    11581 agtcgattgg acgtaaagtt acatttgttc aagataatca ttcaaaatcc aaaaagaatg
    11641 tactcagagg gctacatttt cagagaggag aaaatgcaca gggaaagtta gttcgctgtg
    11701 ctgtcggtga ggtttttgat gttgcggtcg atatccgaaa agaatcacct acttttggtc
    11761 agtgggttgg cgtaaatcta tctgctgaga ataagcgaca gctttggatt ccagaaggtt
    11821 ttgctcatgg ttttgttact ctcagtgatt atgcagagtt tctgtacaaa gcaactaatt
    11881 attactcacc ttcatcggaa ggtagcattc tatggaatga tgagacaata ggtattgaat
    11941 ggcctttttc tcagctgcct gagctttcag caaaagatgc tgcagcacct ttactgcatc
    12001 aagccttgtt aacagagtaa gcatcgtgtc tcatattatt aagatttttc catcaaatat
    12061 tgaattttcc ggtagagagg atgaatcaat cctcgatgct gcgctatcgg ctggcatcca
    12121 tcttgaacat agctgcaaag cgggtgattg tggtatctgt gagtccgatt tgttagcggg
    12181 agaagttgtt gactccaaag gtaatatttt tggacagggt gataaaatac taacctgctg
    12241 ctgtaaacct aaaaccgccc ttgagctaaa tgcgcatttt tttcctgaac tagctggaca
    12301 gacaaaaaaa attgtcccat gcaaggtaaa tagtgctgta ctggtttcag gcgatgttat
    12361 gactttgaag ttacgcacac caccaacagc aaaaattggc ttctttccag ggcagtatat
    12421 caatttacat tataaaggtg taactcgcag ttattctatc gctaatagtg atgagtcgaa
    12481 tggtattgag ttgcatgtaa ggaatgttcc caatggtcag atgagctcgc tcatttttgg
    12541 ggagttacaa gaaaatactc ttatgcgcat tgaaggacct tgcggaacat tttttattcg
    12601 tgaaagtgac agacctataa tcttccttgc aggcggtact ggattcgctc cagttaaatc
    12661 aatggttgag catctcattc agggaaaatg tcgtcgtgag atctacatct actggggaat
    12721 gcaagatagt aaagattttt actctgcatt accgcagcag tggagtgaac agcacgacaa
    12781 cgttcattat atccctgttg tttctggtga tgacgccgaa tgggggggaa gaaagggatt
    12841 tgtccatcat gctgtgatgg atgattttga ttctctagag ttcttcgata tatatgcatg
    12901 tggttcacct gtgatgatcg atgccagtaa aaaggacttt atgatgaaaa atctctctgt
    12961 agaacatttc tattctgatg catttaccgc atctaaataa tattgaggat aatttatgaa
    13021 agcggtcatc ctggctggtg gacttggtac cagattaagt gaagaaacaa ttgtaaaacc
    13081 aaaaccgatg gtagaaattg gtggcaagcc tattctttgg cacattatga aaatgtattc
    13141 tgtgcatggt atcaaggatt ttattatctg ctgtggttat aaaggatatg tgattaaaga
    13201 atattttgcg aactacttcc ttcacatgtc agatgtaaca ttccatatgg ctgaaaaccg
    13261 tatggaagtt caccataaac gtgttgaacc atggaatgtc acattggttg atacgggtga
    13321 ttcttcaatg actggtggtc gtctgaaacg tgttgctgaa tacgtaaaag atgacgaggc
    13381 tttcctgttt acttatggtg atggcgttgc cgaccttgat atcaaagcga ctatcgattt
    13441 ccataaggct cacggtaaga aagcgacctt aacagctact tttccaccag gacgctttgg
    13501 cgcattagat atccaagctg gtcaggtccg gtcattccag gaaaagccga aaggcgatgg
    13561 ggcaatgatc aatggtggtt tctttgtgtt gaatccatcg gttatcgatc tcatcgataa
    13621 cgatgcaaca acctgggaac aagagccatt aatgacattg gcacaacagg gggagttaat
    13681 ggcttttgaa cacccaggtt tctggcagcc gatggatacc ctacgtgata aagtttacct
    13741 cgaagggctg tgggaaaaag gtaaagctcc gtggaaaacc tgggagtaag tagatgattg
    13801 ataaaaattt ttggcaaggt aaacgtgtat tcgttaccgg ccatactggc tttaaaggaa
    13861 gctggctttc gctatggctg actgaaatgg gtgcaattgt aaaaggctat gcacttgatg
    13921 cgccaactgt tccaagttta tttgagatag tgcgtcttaa tgatcttatg gaatctcata
    13981 ttggcgacat tcgtgatttt gaaaagctgc gcagttctat tgcagaattt aagccagaaa
    14041 ttgttttcca tatggcagcc cagcctttag tgcgcctatc ttatgaacag ccaatcgaaa
    14101 catactcaac aaatgttatg ggtactgtcc atctgcttga agcagttaag caagtaggta
    14161 acataaaggc agtcgtaaat atcaccagtg ataagtgcta cgacaatcgt gagtgggtgt
    14221 ggggctatcg tgagaacgaa cccatgggag ggtacgatcc atactctaat agtaaaggtt
    14281 gtgcagaatt agtcgcgtct gcattccgga actcattctt caatcctgca aattatgagc
    14341 aacatggcgt tggtttggcg tctgtgaggg ctggtaatgt cataggtgga ggcgattggg
    14401 ctaaagaccg tttaattccc gatattctgc gctcatttga aaataaccag caggttatta
    14461 ttcgaaaccc atattctatc cgtccctggc agcatgtact ggagcctctt tctggttaca
    14521 ttgtggtggc gcaacgcttg tatacagaag gtgctaagtt ttctgaagga tggaatttcg
    14581 gcccgcgtga tgaagatgcg aagacggtcg aatttattgt tgacaagatg gttacgcttt
    14641 ggggtgatga tgcaagctgg ttactggatg gtgagaatca tcctcatgag gcacattacc
    14701 tgaaactgga ttgctctaaa gcaaatatgc aattaggatg gcatccgcgt tggggattga
    14761 ctgaaacact tagtcgcatc gtaaaatggc ataaagcatg gattcgcggc gaagatatgt
    14821 tgatttgttc aaagcgtgaa atcagcgact atatgtctgc aactactcgt taagaaaata
    14881 agtttaagga atcaaagtaa tgacagcaaa taacctgcgt gagcaaatct ctcagcttgt
    14941 cgctcagtat gcgaatgagg cattgagccc gaaacctttt gttgcaggtg caagcgttgt
    15001 acctccttcc gggaaggtta ttggtgccaa agagttacaa ttgatggttg aggcgtctct
    15061 tgatggatgg ctaactactg gtcgtttcaa tgatgccttt gagaaaaaac ttggggaatt
    15121 tattggagtt cctcatgttt taacgactac atctggctct tcggcaaact tgctggcact
    15181 gactgcgctg acttccccaa aattaggcga gcgtgctctc aaacctggtg atgaggttat
    15241 tactgtcgct gctggcttcc cgactacagt taacccggcg atccagaatg gtttaatacc
    15301 ggtattcgtg gatgttgata tcccgacata taatatcgat gcctctctca ttgaagctgc
    15361 agttactgag aaatcaaaag cgataatgat cgctcataca ctcggtaatg catttaacct
    15421 gagtgaagtt cgtcggattg ccgataaata taacttatgg ttgattgaag actgctgtga
    15481 tgcccttggg acgacttatg aaggccggat ggtaggtacc tttggtgaca tcggaaccgt
    15541 tagtttttat ccggctcacc atatcacaat gggtgaaggc ggtgctgtat tcaccaagtc
    15601 aggtgaactg aagaaaatta ttgagtcgtt ccgtgactgg ggccgggatt gttattgtgc
    15661 gccaggatgc gataacacct gcggtaagcg ttttggtcag caattggggt cacttcctca
    15721 aggctatgat cacaaatata cttattccca cctcggatat aatctcaaaa tcacggacat
    15781 gcaggcagca tgtggtctgg ctcagttaga acgcgtggaa gagtttgtag agcagcgtaa
    15841 agctaatttt tcctatttga aacaaggttt gcaatcttgc actgaattcc tcgaattacc
    15901 agaagcaaca gagaaatcag atccatcctg gtttggcttc cctatcaccc tgaaagaaac
    15961 tagcggtgtt aaccgtgtcg aactggtgaa attccttgat gaagcaaaaa tcggtacacg
    16021 tttactgttt gctggaaatc tgattcgcca accgtatttt gctaatgtga aatatcgtgt
    16081 agtgggtgag ttgacaaata ccgaccgtat aatgaatcaa acgttctgga ttggtattta
    16141 tccaggcttg actacagagc atttagatta tgtagttagc aagtttgaag agttctttgg
    16201 tttgaatttc taatttttga ggggggggga ttcccctcta tgatttcatg aaaattctaa
    16261 taatgggagc gtttgggttc cttggatcac gacttacatc ctacttcgaa agtcgacata
    16321 ctgtgattgg cttagcaagg aagaggaaca atgaagctac cataaataat attatttaca
    16381 cgacagaaaa taattggatc gaaaaaatac tagaatttga accgaatatt attattaaca
    16441 ctattgcttg ctatggaaga cataacgaac ctgcaacagc tttaatagaa agcaatattc
    16501 ttatgcctat cagagtatta gaatctatct catcacttga tgcagtattc ataaattgtg
    16561 gaacatcact gccaccaaat acgagtttat atgcatatac taaacaaaaa gcaaatgaac
    16621 tcgccgccgc cattatagat aaagtttgcg gtaaatatat agagttaaaa ttggagcatt
    16681 tctatggagc ttttgatgga gacgataagt ttaccagtat ggttattaga cgttgtttaa
    16741 gtaaccagcc agtaaagtta acatctggtt tgcaacagag agatttcttg tatataaaag
    16801 atctactaac agcgttcgat tgtattataa gtaatgttaa taatttcccc aaatttcata
    16861 gtattgaagt tggtagtgga gaggcgatat caattcgtga atatgtagat actgttaaaa
    16921 atatcacaaa aagcaattct ataattgaat ttggcgtggt caaagaaaga gtaaatgaat
    16981 tgatgtatag ttgtgctgat atagcagaac ttgaaaaaat aggatggaaa agagagttct
    17041 ctcttgttga tgcattaact gaaataattg aagaggaagg gaaatgaagc ttttaattac
    17101 cggtggatgt ggcttccttg ggagtaatct tgcctccttt gctttaagtc aagggattga
    17161 tttaattgta ttcgataatc tatcacgtaa aggtgcaaca gataatttac attggttatc
    17221 ctccttagga aactttgagt ttgtacatgg tgatattcgc aacaaaaatg atgttacaag
    17281 attaataact aagtatatgc ctgatagctg ttttcatctt gcaggtcaag tggcaatgac
    17341 tacatctatt gacaatcctt gtatggattt tgaaattaat gtaggtggaa ctttaaattt
    17401 acttgaggca gtacggcagt ataattcaaa ttgtaatata atttattcat caacaaataa
    17461 agtatacggc gatcttgagc aatataaata caatgaaaca gaaactagat acacttgtgt
    17521 agataagcct aatggatatg atgagagcac acaattagat ttccactcac catatggttg
    17581 ttcaaaaggt gctgcagacc aatacatgct tgattatgca aggatttttg gtttgaatac
    17641 agtggtgttc aggcattcat caatgtatgg tgggagacag tttgctactt atgatcaagg
    17701 ctgggtaggt tggttttgtc aaaaagcggt tgaaattaaa aatggtatta ataaaccctt
    17761 cactatttct ggtaatggta agcaagttag ggatgttttg catgctgaag atatgatttc
    17821 gttatatttc actgccttgg caaatgtatc aaaaattagg gggaacgctt ttaatattgg
    17881 tggtaccatt gtcaacagcc tatcattact tgaattattc aaattgcttg aagattattg
    17941 caacatagat atgaggttca ctaatttacc tgtaagggaa agtgatcagc gtgtttttgt
    18001 tgcagatatt aaaaaaatca ctaatgcaat tgactggagc ccgaaagtct cggcaaaaga
    18061 tggtgtccag aaaatgtatg attggactag ttctatatga tgtttctgcc cgcgaaagcg
    18121 ggcataatta aagaatgaaa tattttttat aattaaaaga tgaagctgac gtgaggaaac
    18181 tgaggttggt tagaattcca agacatctta ttattgccgc ttcctcttgg ctttcaaaga
    18241 taataattgc cggtgttcag ttagtaagtg ttaaatttct tttagaaatt cttggcgaag
    18301 aatcatacgc tgtatttact cttttaactg gattattggt ctggtttagc attgcagata
    18361 ttgggattgg tagtagtcta caaaattata tatctgagtt gaaagctgat agaaaatcat
    18421 atgatgcata tatcaaggcc gcagttcata ttctattcgc atccttaatc attttaagct
    18481 ctacattatt cttcttatca gataaattat cgtcactata tcttacttca tttagcgatg
    18541 aattgaaaaa caactcagga agttattttt ttatagcaag tatattattt atattcatcg
    18601 gcgttgggag tgtggtctat aaaatattat ttgcggaact gttagggtgg aaagctaata
    18661 taattaatgc attatcttat cttttaggtt ttttagatgt agttgcgatc cattatttaa
    18721 tgccagattc gagtattacc ttcgctttag tagcattgta tgctccggta gcaatactgc
    18781 ccattatata tatatcgttt cggtatatat atgttcttaa agcgaaagta aactttaaca
    18841 cctataaatt attactatca cgttcatcag ggtttctgat tttttcgtcc ttatcgataa
    18901 tagttttaca aactgattat attgtgatgt ctcagaaatt atctgctgca gatattataa
    18961 aatatactgt aacgatgaaa atatttggtt taatgttttt tatttatact gcggtattac
    19021 aagcattatg gccagtatgt gctgaattac gagtgaaaat gcagtggaga aagctgcata
    19081 gaatcatttt cctaaatatt attggtgggg tattttttat tggtcttggt acgttattta
    19141 tttatgtttt aaaggattat atctatagca taattgctaa cggtatagat tataatatta
    19201 gtggggttgt ttttgtttta ctggctgtgt attttagtat aagagtttgg tgtgatacat
    19261 ttgctatgtt acttcaaagt atgaaccaat taaaaattct ttggctcata gttccgtgtc
    19321 aggcattaat tggtggtgtg actcaatggt attttgcaga gcattatgga atagttggta
    19381 ttttatacgg actaatttta tcgttctcgc taactgtttt ttggggattg ccagtgtatt
    19441 atatgtataa gagtaaaagg ctagcataat atgaaggtat cattttgtat cccaacgtat
    19501 aatcgagtaa aattcattga agaccttctt gaaagtatta ataatcaatc ttctcactcc
    19561 ttaattgtag aagtatgtat ttcagataat gcatcaactg atggaactga agaatcaata
    19621 aatatctgga gagatagatt taattttcca attttatatc aaaggcataa cgaaaatatt
    19681 gggccagata ggaattattt atctgcagtt aatatgggga ctggagatta ttgttggatt
    19741 ttcggaagtg atgatattct tacaaaaaat tcccttgcat tgatggaaga taaattggct
    19801 gccggaagtg acatttattt atgtgacaga cgagaattag atatttcaat gacgaaaata
    19861 tctaatccac atcggcgatg gttaaatggt ggcagtagat tattttcttt tagcaatgaa
    19921 gctgatttga tagagtactt tagtaaatgt aactcagtcg gcggactttt tagctactta
    19981 agctctatta tagtgaaaag gaataaatgg tctgacgtct tatttgacga gtcatacatt
    20041 ggtacagctt atgcgcatgt atatatttta ttaagaataa ttaacaatat gaattcgacc
    20101 ctgcagtaca tatcactgcc actggttgat tgcagaggag ataacgatac attcgaaagt
    20161 aatgggaagg ctcgtcgaat aaaaattgat ttcatcggtt atttaaaact gagggaggat
    20221 ttttataata acaatacaaa aatatatatc tcatttggac gggttcttac aaaagagcgt
    20281 ccttggcttt atacttcttt agctatggca tgttatggtg attctaccga tagagctgaa
    20341 cttgcatcat tttataagaa gttgggatat ccgaaaatag ccaccaattt aatattttgt
    20401 cttaaagggc tggctagcta cactaaaaaa ataaaattag caaaaatggt aataaaaaaa
    20461 atattttcat agtatcaaca tcaatacaaa tcgagtttat agtgtaaaaa atgcttatgc
    20521 tattattgtc gtgactattt agcgtaaagt ttatacgtgt tttgtaggat gatttatttg
    20581 caatttcctt aattagaacc tttaaatact cttgcttttt cggatacagt aacagatgct
    20641 atatatgtat ctataatatg tatggccggg gttgtttttg actatttatc aatttcaaaa
    20701 ttaagacttg tggcaattag agcttgtcgg aaaccctact tttctttctt ttgctcacta
    20761 tgctcttgca tatcttagtg tttaccatag agtgagtata ttatgacaga tgctattttt
    20821 tgtggcattt ttacttggta taatatttgg cttagtatta tgaactgatt ttaatggtga
    20881 ttttataata attacaaggc ttgcttatat ttatttggat atgattcctt attcattttt
    20941 aattatgatc cgtggttcat tttaatgaaa atgtttccta ataactattg gtcgttcttg
    21001 tgataatcgc tatacaagca tgaatggaaa aacggagagc tattcaatga tcgttaacct
    21061 atcacgttta ggtaaaagcg gtacggggat gtggcaatac tcgattaaat ttttaacggc
    21121 tctgcgagaa atagctgatg ttgacgcaat aatctgtagc aaggtacacg ctgattattt
    21181 tgaaaagctc ggttatgcag tagttactgt tccgaatatt gttagcaaca catcaaaaac
    21241 atcgcgactt agaccattag tatggtatgt atatagttac tggcttgcgc tgagggtttt
    21301 aattaagttt ggtaataaaa aattggtgtg tactacgcat cacactattc ccttactgag
    21361 aaaccaaacg ataaccatac atgatataag acctttttat tatccagata gtcttattca
    21421 gaaagtgtat tttcgctttt tattaaaaat gtctgttaag cgatgtaagc atgttttaac
    21481 ggtatcttat accgttaaag atagcattgc taaaacttat aatgtagata gtgagaaaat
    21541 atcagtaatt tataacagcg ttagtaaatc tgattttata caaaaaaaag aaaaagagaa
    21601 ttacttttta gctgttggag caagttggcc acataaaaat attcattcat tcataaaaaa
    21661 taaaaaagtt tggtctgact cttataattt aattattgta tgtggtcgta ccgactatgc
    21721 aatgtctctc caacaaatgg tcgttgatct gaaactaaca gataaagtga cttttttaca
    21781 tgaagtctca tttaatgaat taaaagtttt atattctaaa gcctacgcgc ttgtttatcc
    21841 atctattgat gagggttttg gcatacctcc tattgaagcg atggcatcaa atactccagt
    21901 tatagtgtcc gatataccag tatttcatga agtgttaacc aatggtgcat tatatgtgaa
    21961 tccggatgat gaaaaaagct ggcagagtgc aattgaaaat atagggcagt tgcctgatgc
    22021 aatttccaga tttaacaact atgtcgcacg gtatgacttt gataatatga agcagatggt
    22081 tggcaattgg ttggcggaat caaaataaat gaaaataaca ttaattattc ccacatataa
    22141 tgcagggtca ctttggccta atgttctgga tgcgattaag cagcaaacta tatatccgga
    22201 taaattgatc gttatagact caggttctaa agatgaaacg gttctgttag cctcagacct
    22261 gaaaaatata tcaatattta atattgactc taaagatttt aatcatggag gaaccagaaa
    22321 cttagcagtt acaaaaactc tggacgctga tgttataatt tttctaacac aagatgcaat
    22381 tctcgcggat tcggatgcaa ttaaaaattt ggtttattat ttttcagatc cattgatagc
    22441 agcggtttgt ggtagacaac ttcctcataa agatgctaat ccccttgcag tgcatgctag
    22501 gaattttaat tatagctcaa aatctattgt taaaagcaag gcagatatag aaaaatttgg
    22561 tattaaaact gtatttatgt ccaattcttt tgctgcctat cgccgttccg tttttgaaga
    22621 gttaagtggg tttcctgaac atacaattct tgccgaggat atgtttatgg cggctaagat
    22681 gattcaggcg ggttataagg tcgcctactg cgctgaagcg gtggtaaggc actcccataa
    22741 ttataccccg cgagaagagt ttcaacgata ttttgatact ggtgtatttc atgcttgttc
    22801 tccgtggatt cagcgtgact ttggcggagc cggaggagag ggtttccgat tcgtaaaatc
    22861 agagattcaa ttcctgctta aaaatgcacc gttctggatt ccaagagctt tattaacgac
    22921 ctttgctaaa ttcttgggtt acaaattagg caagcattgg caatctttac cgttgtctac
    22981 atgtcgctat tttagcatgt acaagagtta ttggaataat atccaatatt cttcgtcaaa
    23041 agagataaaa taaatgtctt ttcttcccgt aattatggct ggcggcacag gtagccgttt
    23101 atggccgctt tcacgcgaat atcatccgaa gcagttttta agcgttgaag gtaaactatc
    23161 aatgctgcaa aatactataa agcgattagc ttcactttct acagaagaac ccgttgtcat
    23221 ttgcaatgac agacaccgtt tcttagtcgc tgaacaactc cgtgaaattg acaagttagc
    23281 aaataatatt attctcgaac cagtaggccg taatactgca ccagcgatcg ctcttgccgc
    23341 gttttgtgcg ctccagaatg ctgataatgc tgatcctctt ttgttggttc ttgctgcaga
    23401 tcatgtgatc caggatgaaa tagcgtttac gaaagctgtc agacatgctg aagaatacgc
    23461 cgcaaatggt aagcttgtaa cttttggtat tgttccaacg catgctgaaa cgggttatgg
    23521 atatattcgt cgtggtgagt tgataggaaa tgacgcttat gcagtggctg aatttgtgga
    23581 gaaaccggat atcgataccg ccagtgacta tttcaaatca gggaaatatt actggaatag
    23641 cggtatgttt ttatttcgtg caagctctta tttaaacgaa ttgaagtact tatcacctga
    23701 aatttacaaa gcttgtgaaa aggcggtagg acatataaat cccgatcttg attttattcg
    23761 tattgataaa gaagagttta tgtcatgccc gagtgattct atcgattatg cagttatgga
    23821 gcacacacag catgccgtgg tgataccaat gagtgctggc tggtcggatg tgggatcctg
    23881 gtcctcactt tgggatatat cgaataaaga tcatcagaga aatgttttaa aaggagatat
    23941 cttcgcacat gcttgtaatg ataattacat ttattccgaa gatatgttta taagtgcgat
    24001 tggtgtaagc aatcttgtca ttgttcaaac aacagacgct ttactggtgg ctaataaaga
    24061 tacagtacaa gatgttaaaa aaattgtcga ttatttaaaa cgaaatgata ggaacgaata
    24121 taaacaacat caagaagttt tccgctcttg gggaaaatat aatgtgattg atagcggcaa
    24181 aaattacctc gtccgatgta tcactgttaa gccgggtgag aaatttgtgg cgcagatgca
    24241 tcaccaccgg gctgagcatt ggatagtatt atccgggact gctcgtgtta caaagggaga
    24301 gcagatttat atggtttctg aaaatgaatc aacatttatt cctccggata ctattcacgc
    24361 gctggaaaat cccggaatga tccccctgca gttaattgag attcaatcag gtacctatct
    24421 tggtgaggat gatattattc gtttagaaca acgttctgga ttttcgaagg agtggactaa
    24481 tgaacgtagt taataatagc cgtgatgtta ttcattcatc aggtattgtg tttggaacga
    24541 gtggggctcg cggtcttgta aaagatttta cacctcaggt atgtgctgct tttacggttt
    24601 catttgttgc cgttatgcag gaacattttt cctttgatac cgtagcattg gcaatagata
    24661 atcgtccaag tagttatggg atggctcagg cgtgtgctgc tgcattggca gataaaggcg
    24721 ttaactgtat tttttatggt gtggtaccaa ccccggcttt ggcctttcag tctatgtctg
    24781 acaatatgcc tgcgataatg gttacgggaa gtcatattcc attcgagcgg aacggcctca
    24841 agttttatcg tcctgatggt gaaatcacga aacatgatga ggctgcgatc cttagtgttg
    24901 aagatacgtg cagccattta gagcttaaag aactcatagt ttcagaaatg gctgctgtta
    24961 attatatatc tcgttataca tctttatttt ctactccatt cctgaaaaat aagcgtattg
    25021 gtatttacga acattcaagc gctgggcgtg atctttataa gcctttattt attgcattgg
    25081 gggctgaagt cattagcttg ggtagaagcg ataactttgt acctatagat acagaggctg
    25141 taagcaaaga ggatcgggaa aaagcacgct catgggctaa agagttcgat ttagatgcca
    25201 tattctcaac agatggggat ggtgatcgtc ctcttattgc tgatgaggcc ggtcagtggt
    25261 taagaggcga tatattaggt ctattatgtt cacttgcatt gggggcagaa gcggtcgcta
    25321 ttcctgttag ttgtaatagc ataatttctt ctggccgctt ttttaaacat gttaaactta
    25381 cgaaaattgg ctcgccttat gttatcgaag cttttaatga attatctcgg agttatagtc
    25441 gtattgtcgg ttttgaagcc aatggcggtt ttttattagg aagcgatatc tgtattaacg
    25501 agcagaatct tcatgcctta ccaactcgtg atgctgtatt accagcaata atgctacttt
    25561 acaaaagtag gaatatcagc attagcgctt tagtcaatga actcccaact cgttacaccc
    25621 attctgacag attacaggga attacgactg ataaaagtca atccttaatt agtatgggca
    25681 gagaaaatct gagcaacctc ttaagctata ttggtttgga gaatgaaggt gcaatttcta
    25741 cagatatgac agatggtatg cgaattacct tacgtgatgg atgtattgtg catttgcgcg
    25801 cctctggtaa tgcacctgag ttacgctgct atgcagaagc taatttatta aatagagctc
    25861 aggatcttgt aaatataacg cttgctaata ttaaaaaacg atgcttgccg taaaagaatt
    25921 gaatgttatt tacttaatat gcctatttta tttacattat gcacggtcag agggtgagga
    25981 ttaaatggat aatattgata ataagtataa tccacagcta tgtaaaattt ttttggctat
    26041 atcggatttg atttttttta atttagcctt atggctttca ttaggatgtg tctattttac
    26101 ttttgatcaa gtacagcgat ttattcctca agaccaatta gatacaagag ttattactca
    26161 ttttattttg tcagtagtat gtgtcggttg gttttggatt cgtttgcgac attatacata
    26221 ccgcaagcca ttttggtatg agttaaaaga aatttttcgt acgatagtta tttttgctat
    26281 atttgatttg gctctgatag cgtttacaaa atggcagttt tcacgctatg tctgggtgtt
    26341 ttgttggact tttgccataa tcctggtgcc tttttttcgc gcacttacaa agcatttatt
    26401 gaacaagcta ggtatctgga agaaaaaaac tatcatcctg gggagcggac agaatgctcg
    26461 tggtgcatat tctgcgctgc aaagtgagga gatgatgggg tttgatgtta tcgctttttt
    26521 tgatacggat gcgtcagatg ctgaaataaa tatgttgccg gtgataaagg acactgggac
    26581 tatttgggat ttaaatcgta caggtgatgt ccattatatc cttgcttatg aatacaccga
    26641 gttggagaaa acacattttt ggctacgtga actttcaaaa catcattgtc gttctgttag
    26701 tgtagtcccc tcgtttagag gattgccatt atataatact gatatgtctt ttatctttag
    26761 ccatgaagtt atgttattaa ggatacaaaa taacttggct aaaaggtcgt cccgttttct
    26821 caaacggaca tttgatattg tttgttcaat aataattctt ataattgcat caccacttat
    26881 gatttatctg tggtataaag ttactcgaga tggtggtccg gctatttatg gtcaccagcg
    26941 agtaggtcgg catggaaaac tttttccatg ctataaattt cgttctatgg ttatgaattc
    27001 tcaagaggta ctaaaagaac ttttggctaa cgatcctatt gccagggctg aatgggaaaa
    27061 agattttaaa ctgaaaaatg atcctcgaat cacagctgta ggtcgattta tacgtaaaac
    27121 tagccttgat gagttgccac aactttttaa tgtactaaaa ggtgatatga gcctggttgg
    27181 accacgacct atcgtttcgg atgaactgga gcgttattgt gatgatgttg attattattt
    27241 gatggcaaag ccgggcatga caggtctatg gcaagtgagt gggcgtaatg atgttgatta
    27301 tgacactcgt gtttattttg attcctggta tgttaaaaac tggacgcttt ggaatgatat
    27361 tgccattctg tttaaaacag cgaaagttgt tttgcggcga gatggtgcgt attaagctta
    27421 ccgagaagta ctgaataata attgtataaa atagcctgcg taaaatctga acgcatcaat
    27481 cgctacctta atatcatacc tttgagttaa catactattc acctttaacc tgccatgacc
    27541 gtttgtggca gggtttccac acctgacagg agtatgtaat gtccaagcaa cagatcggcg
    27601 tcgtcggtat ggcagtgatg gggcgcaacc tcgcgctcaa catcgaaagc cgtggttata
    27661 ccgtctccgt tttcaaccgc tcccgtgaaa agaccgaaga agtgattgcc gagaatcccg
    27721 gcaaaaagct ggtgccttat tacacggtga aagagtttgt tgaatccctc gaaacgcctc
    27781 gtcgtatcct gttaatggtg aaagcgggtg caggtactga tgcagctatc gattcgctga
    27841 aaccgtatct ggaaaaaggc gatatcatta ttgatggcgg taacaccttc ttccaggaca
    27901 caatccgtcg caatcgcgag ctgtctgcgg aaggttttaa ctttatcggt accggtgttt
    27961 ccggtggtga agagggcgcg ctgaaagggc catctatcat gcctggcggt cagaaagatg
    28021 cctatgaact ggtggcgccg atcctgacga agattgctgc tgtggcagaa gatggcgaac
    28081 cgtgcgtgac ctatatcggc gccgatggcg cgggtcacta cgttaagatg gtccacaatg
    28141 gtattgaata tggcgatatg cagcttatcg ctgaagctta ctccttgctg aaaggcggcc
    28201 tgaatctcag caatgaagag ttggcgaaca cttttactga gtggaataac ggcgagctga
    28261 gcagttatct gatcgacatc actaaagaca tcttcactaa aaaagatgaa gacggtaatt
    28321 acttgataga tgttattctt gatgaagccg ccaacaaagg gaccggtaaa tggaccagcc
    28381 agagcgcgct ggatctgggc gaaccgctgt cgctgattac cgaatccgtc tttgcgcgtt
    28441 acatctcttc gctgaaagcg caacgtgttg ccgcatctaa agtgctctcc gggccgaaag
    28501 cgcagccggc gggcgacaaa gcggaattta tcgagaaagt gcgtcgcgcg ctgtatcttg
    28561 gcaagatcgt ctcctatgcg cagggcttct cgcagctacg cgccgcgtct gatgaatatc
    28621 actgggagct taactacggc gagattgcta agattttccg tgcgggctgt atcattcgcg
    28681 ctcagttcct gcagaagatc accgatgctt acgcagaaaa cgccggtatc gctaacttgc
    28741 tgttagcgcc ttacttcaag aaaattgctg atgagtacca gcaggcgctg cgtgatgttg
    28801 tggcttacgc ggtgcagaat ggcattccgg tgccgacatt ctctgcggca gtggcctact
    28861 atgacagcta tcgcgccgca gtactgccag ctaacttaat tcaggcgcag cgtgactact
    28921 ttggtgcgca cacctataaa cgtactgata aagaaggcat tttccatacc gagtggttgg
    28981 aataatttct gcaagcttgt ttaagcccgg tttaatactg ggcttttttt tatctctatt
    29041 cttattgatt tatcgctttt gcttaatatt aacttaataa tctgtgttta tcgtaatgaa
    29101 gataatctga attgttttcg tctgcgttgc actttatata ctcaggcgtt aaaactttga
    29161 tatcttatca ggatgcgaaa tacatcatga ttcataatta agttaattct gagagcgaat
    29221 aatgaaaatc acgatatccg ggacgggtta tgttggcttg tctaatggtt tgcttattgc
    29281 acaacaccat gatgtggtgg cgttagacat tgttcctgcc cgtgttgaac tgttaaatga
    29341 tcggatatct ccgattgttg ataaagaaat tcagcaattt ttaaaggaag ataacatcag
    29401 attcagggca acgctggata agtttgatgc ataccagaat gcagattacg tcatcattgc
    29461 tacgcctaca gattacgatc caaaaaccaa ctattttaat acgttcagtg tagaatcggt
    29521 cattcaggat gtgatcagca tcaaccccgc agccgtgatg attattaagt ctacggtgcc
    29581 ggttggcttt acggcggcaa tgcgtcagaa gtttgcgaca gaaaatatca ttttctctcc
    29641 ggaattttta cgtgaaggta aagcccttta cgataacctt tatccctccc gtatcgtgat
    29701 tggggaacag tctgagcgcg cccgagaatt tgccgcatta ctccaggaag gcgctattaa
    29761 acaggagatt ccgacgctgt ttacggactc cactgaagcg gaagccatta aacttttcgc
    29821 caatacttac ctcgccatgc gagtcgctta ttttaatgaa ttagacagtt atgctgaaac
    29881 gttaggatta aatacccgac aaattattga aggggtgtgc ctcgacccgc gtattggcaa
    29941 tcattacaat aatccctctt ttggttatgg cggatattgt ttgccaaaag ataccaaaca
    30001 gttgctggct aattatcagt cagtgcctaa taatattatc tccgctatcg ttgaagcaaa
    30061 ccgtacgcgt aaagatttta ttgccgattc tatccttgcc agaaagccta aagtggtggg
    30121 catttatcgc ctgattatga agagtggctc cgataacttc cgcgcctcat cgattcaggg
    30181 gattatgaaa cgtattaaag cgaaaggcgt agaggtcatc atctatgagc cggtaatgca
    30241 agaagaaact ttctttaact cacgtcttga acgtgatttg cactgcttta aacagcaggc
    30301 ggatgtcatt atttccaatc ggatggcggc agagcttttg gatgtcgctg aaaaagtgta
    30361 tacccgcgat cttttcggta gtgattaata aggcaatcgg ggctgatgag tcccgatgat
    30421 ttattgacca aatggaaata atgtctgatt tttatcatta atcctatggc atatattttc
    30481 tttatgacta cactgtctcc agcttcatcc tttttttagt tagggtatct atgacagtgg
    30541 atagtaatgc gtcttccggg cgtgggaacg atccggaaca gattgatttg attgagttat
    30601 tgctacagtt atggcgtggg aagatgacca ttattgtagc cgttattatc gccattttgc
    30661 tggccgtagg ctacctgatg atagccaaag aaaaatggac atccacggcg attattaccc
    30721 aacctgatgc cgcgcaggtt gccacctata ccaacgcgct caacgtcttg tatggcggga
    30781 atgcccccaa aatctctgaa gtgcaggcga attttataag ccgctttagt tctgcgtttt
    30841 ccgcattatc ggaagcgctg gataatcaga aagagcggga aaagctcacc attgaacagt
    30901 cggtaaaggg gcagacgctg ccgctctcgg tttcttatgt gagcactacc gctgaagggg
    30961 cgcagcgtcg gctggcggaa tatatccaac aggtggatga agaggtcgct aaggaactgg
    31021 aagttgacct gaaagataac atcacgctgc aaaccaaaac gttgcaggag tcccttgaga
    31081 cgcaggaagt tgtggcgcag gagcaaaaag atctgcgtat taagcaaatc gaagaagcgt
    31141 tgcgctatgc ggatgaggcc aaaatcacgc agccgcagat tcagcaaacc caggatgtta
    31201 cccaggacac gatgttcctg ttggggagcg atgcgctaaa atcgatgata cagaacgaag
    31261 cgacgcgtcc actggtcttt tctccggcct attaccagac gaagcagaca ctgctggaca
    31321 ttaaaaatct gaaagtgact gccgatacgg tgcacgtcta tcgttatgtg atgaagccga
    31381 cgctgccggt ccgtcgcgat agcccgaaaa cagccattac cctcgtgctg gctgtgttgc
    31441 tgggcgggat gatcggcgcc gggattgtgc tggggcgcaa tgcgctacgt agctataagc
    31501 caaaagcctt gtaagcttct ttgccggatg gtggtcggct tcgaaaggta aaatttctca
    31561 ttaaaaaacc gggcattgcc cggttttttt acgcttattg atgacgctta cgaagatcgt
    31621 cgatcacggt ggtgaggttg agatcctgat cctgcaacag caccagcagg tggtacatca
    31681 aatcagacgc ttcattggtt aattcaaaac gatcattgac ggtggccgcc agcgcggttt
    31741 ctacaccttc ttcgccaact ttttgcgcaa tacgtttggt accgctggcg tacagtttcg
    31801 ccgtgtaaga gctggccgga tcggcggttt tgcgctctgc cagtagctgc tccagttgat
    31861 acaggaataa ccactgatgg ctggcgtcgc caaagcagct gctggtacct ttgtggcagg
    31921 tcggcccgac agggtttgcc agcaccagca gtgtatcgtt gtcgcaatct ggcgcaatgc
    31981 tgacgacatt cagcacatgg cctgaggttt cgcctttggt ccataaacgc tgtttcgtgc
    32041 gtgagaagaa cgtgacatgg ccggattcaa tggttttgtc cagcgcttgt gggttcatat
    32101 agcccagcgt caatacttcg ccggataccg catgttgcac gatggctggc atcaggccat
    32161 cggttttttc ccagtccagc tcgcggcgtt gttgctctgt taacatatcc tgatctccac
    32221 gccctggcct gccaggtacg cttttaattc gccaatattg atgatttgct tgtgaaaaac
    32281 ggaggcggca agcgcgccgt cgacatcggc atcacggaat gcctcaagaa agtgttccat
    32341 cgtgcccgcg ccgccggagg cgatcagcgg cacgcggcaa acgtcacgga cttttttcaa
    32401 ctgcgtcaga tcataaccgt tacgcacgcc gtcctggttc atcatattca ggacgatttc
    32461 ccccgcgccg cgctgttgta cctcttgcac ccagtccagc gtctcccact gcgtcacgcg
    32521 ggtacggttt tcatcgccgg tatactggtt aacatgatat ttccccgtgg cgtcgtcaaa
    32581 ccaggtatca atcccgacga caatgcactg cacgccaaaa cggtcagcca gacgggtaat
    32641 cagcgttggg tcagccagtg caggggagtt gatagagatc ttatccgccc cgaaagagag
    32701 aattttggcg gcgtcgtcaa ttgaccggat accgcccgct acacaaaacg gaatgtcgat
    32761 cacctcggca acgcgcgcta cccagctttt atcgactacg cgaccatcgc tggaggcggt
    32821 aatgtcatag aacaccagtt cgtccgcgcc ttcgtcggca tagcgtttgg ccagcggaac
    32881 gatatcgcca atgatctcat ggttgcgaaa ctgtacgcct tttaccacct gaccatcacg
    32941 aacgtccaga cacggaatta tacgttttgc cagcattgga tggcctcctt aacggtaaat
    33001 ttcccttcca acagcgcgcg tccgacaatc acgccgcgca cgccggtgcc gcgcagggcg
    33061 gcaatatcat cgatatcgcc aataccgccg gaggattgaa aggcgatctg cggatatctg
    33121 gcgcatatct cttcgtacag tgaaacgtta gagcccgcca gcgtgccgtc gcgagaaata
    33181 tcggtacaca gtacatgttt caggccgacg gggagatagg tctccaccag ttgttccagc
    33241 gagacgccgg aattttcctg ccagccgcta accgccacct gcttgttgcc gtgttcgtct
    33301 atgcgaacgt ccagcgccag taccagcgcc tgcgcgccaa aacgttcaaa ccagcctttc
    33361 accacgtcag gggatttcac cgccgttgaa ccgatgacca cacgggcaac gccagctttc
    33421 agtaatgccg caacgtcttc ttcggtacgc acgccgccgc cgacctgaac aggcacgttc
    33481 acgcccgcga ccagagtttt aatcagcggt atctgtcgct tagccggatc tttagcgccg
    33541 gtcagatcta ccagatgtag caccccggcg ccctgggcgg cgtaatcctg caaacggggc
    33601 aggggatcgt taccgtaatc ccgctgccgg gcgtagtcgc cctggtggag acgcaccacg
    33661 gtgccgtcaa ttaaatctaa tgccggaata atcattacat ctccaggaag tttttcagca
    33721 actgtgcacc cgccgcgccc gaacgttccg gatggaactg tacgccgaag aaattatctt
    33781 tctgtaccgc cgcggtaaac ggctcgccgt aattgcactg ggcgatagtc cacgggttga
    33841 ccggcatcgc gtagctgtga acaaagtaaa aataggcgcc atcttcaatg ccctgaaaca
    33901 gccggttgcc cgcctgcgga tacacgcgat tccagcccat gtgtggcagc ggcagaccaa
    33961 agtcggtcat tttcggcaca tcttgttcga taatgttcag cagatccacg ccgcgtgtct
    34021 cttcgctgcg acgacccagc agttgcatcc ctaagcagat acccagtacc ggctgagtac
    34081 acgctttaat taagtcgatc agttcacgtt cgcgcagttg atccatagcg gcttgcgccg
    34141 tgccgacgcc gggcagaaag agtttgtcag cgcgtaatac gatttccgct tcgcggctga
    34201 ccaccggggt gtaaccgtgg cgcgccacgg cggattttac cgagcttaaa ttggcgcagc
    34261 cggtgtcaag gatgacgacg ttcatcacag cactcctttc gaggacggta atgtatcgcc
    34321 ctccacgcga atagcctggc gtagcgtccg accaaaggct ttaaacaaac tttcgacacg
    34381 gtggtgatcg ttcttacctt tagtcttgag atgcagagtg acgcccatcg tgtaagagag
    34441 tgagcggaaa aagtgttcaa tcatctctgt gctcaaatcg cccacacgct ggtaggtaaa
    34501 ttcagcttta tattccagat gcggacgacc ggaaatatcc agcgcgcagc gcgccagaca
    34561 ttcatccatc ggtagtacaa agccaaaacg gcagataccg cgcttgtcgc cgagtgccag
    34621 ttttaacgcc tcaccgagcg ccagcccggt atcttctacc gtgtggtgat cgtcgatata
    34681 gagatcgccc ttaacggtaa tctccatgcg aaagccgccg tgggtggcga tttgatcgag
    34741 catatggtca aagaagccga cgccggtatt aatcttgctg ttgccttcgc gatccagcca
    34801 gacgctgaca tcaatctgtg tctctttggt gttgcggacc acatgcgcat agcgatcgcg
    34861 tttcgttagc tgttcgccaa tcatcgtcca gttcaacgtt tcacggtgat agcgtaaacc
    34921 agtaatgccc atattatcag cgagttggat atcggttgca cgatcgccaa tcacatagct
    34981 gttggcgcta tccatcgctt gttccgcaag ataacgctcc accagcttca ctttgggctt
    35041 gcggcagtcg cagtcgtctg cgggcaggtg agggcagatc agcacctcat caaagcatac
    35101 gccctgagaa gtgaaaatct gcatcatcag gttgtgcggt ccgtcgaagt ccgcctgcgg
    35161 gaagctttgc gtgccaagtc catcctggtt agtgatcatc accagcttaa aaccggcttt
    35221 ttgcagcttc agcaatacgg gaatcacctc tggctcaaag gccagtttat caaagtggtc
    35281 tacctgaaaa tcgctcggcg gttcggaaat taaggttccg tcccggtcga tgaaaagata
    35341 cttctgactc atactggctc cgcacgtaag gcgtcaatga cgcgctggtt ttcctggcgg
    35401 gtgccgaccg taatccgcag gcagccgctt aaagaaggtt gtttattctg atcgcgtaag
    35461 ataatgccct gatcccataa ggatttaaac acgctgctgg aggcggtaaa ccgcgccaga
    35521 atatagttgg tttcagagtc aaagacgtgt tctacgcagg cggtctgttg cagggcattc
    35581 accagatact gacgttcctg cactgtctgc gccacgcgat cgcgcattac gtttattccc
    35641 tgcgggctca gcgcttgggc ggcgatatcc gccactggcg tagaaagcgg ataaggggcg
    35701 atcactttta acagcaggtt gatcacctct tcattagcca gcgtaaagcc gcagcgcaga
    35761 cccgccagcg caaaagcttt cgacaatgtg cgcaggataa ccagatgagg atatttaacc
    35821 agccagcctg ccagcgtggc ctgcgggcaa aactcaatat aagcttcgtc ggcgacgact
    35881 atcgctttac cgcgtgtcaa ctccagcagc gtgcgcagat cctgcgggtt gataagttgc
    35941 ccggtaggat tattggggct acaaacgaac accacttttg cgccgtcaag gttgtcggaa
    36001 atcccctgta gatccagctg ccagttttca agcgcgggaa ccgtccggcg ctctacgcca
    36061 atggtttcgg cgctgacgct gtacataccg taagtgggcg gacagtagag aatggcgtct
    36121 ttccccggtt cgcagaaggc gcggatcacc agttcgatcc cttcatccgc gccgcggctg
    36181 accagcacct gctccggctt tacgccagca tattgcgcgt agttttcaat cacggccttt
    36241 ggctggcatt ccgggtagcg gttaagcgtt tgttgggtga gctgaaactc caccgctgtc
    36301 gggaattcat tcgcgttcag ccagacatcg ccgttaccgc ccagacggcg ggcggactga
    36361 tacggtacca ggttgcggac attttcacgg gctaagtctg cgacgctgag agtgttttca
    36421 gtgctcatgc ttgctccttg agggcgttta cgcgcagggt cacggcattt ttatgggcgg
    36481 tcagacgttc tgccgccgcc aatgtttcaa tggttgatgc cagagcggaa aagcccgctt
    36541 tcgacagttc ctgaacggtc atccgtttct ggaaatccgc taacccaagg ctggaacagg
    36601 tagcagtata gccataggtc ggtaaaacat ggttggttcc ggaagcgtaa tcaccggcgg
    36661 attccggcga ccagtcgccg agaaataccg agcctgcgct ggtaatcgca tccaccaaat
    36721 cgcgcgcatt gcgcgtctgg ataattaagt gttccggccc atactgatta gagatggcga
    36781 cgcactgcgc taaatctttg gtcacaatc
//
LOCUS       DAGWFR010000020        35204 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.020, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000020 DAGWFR010000000
VERSION     DAGWFR010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 35204)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35204)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35204
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.020"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..1121
                     /gene="recD"
                     /locus_tag="MOX77_001161"
     CDS             <1..1121
                     /gene="recD"
                     /locus_tag="MOX77_001161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit alpha"
                     /protein_id="HCA3356756.1"
                     /translation="LHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLI
                     DALPPHGRVIFLGDRDQLASVEAGAVLGDICAYVNAGFTAERARQLSRLTGSAIPAGA
                     GTQAASLRDSLCLLQKSYRFGSDSGIGKLAAAINCGDRSAIQAVFQQGFSDIEKRTLQ
                     SSDDYAGMLDEALAGYGRYLRLLHEKAAPEAILQAFNEYQLLCALREGPFGVRGLNDR
                     IEQAMVQQRKIQRHPHSRWYEGRPVMIARNDSALGLFNGDIGIALDRGQGLRVWFVMP
                     DGTIKSVQPSRLPEHDTTWAMTVHKSQGSEFDHAALILPSQRSPVVTRELVYTAVTRA
                     RRRLSLYADERILAGAIVTRTERRSGLATLFDEVSRIG"
     gene            complement(1224..2555)
                     /gene="argA"
                     /locus_tag="MOX77_001162"
     CDS             complement(1224..2555)
                     /gene="argA"
                     /locus_tag="MOX77_001162"
                     /EC_number="2.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino-acid N-acetyltransferase"
                     /protein_id="HCA3356757.1"
                     /translation="MIKERKTELVEGFRHSVPYINTHRGKTFVIMLGGEAIEHDNFSS
                     IVSDIGLLHSLGIRLVVVYGARPQIDANLAAHHHEPIYHKNTRVTDAKTLELVKQAAG
                     LLQLDITARLSMSLNNTPLQGAHINVVSGNFTIAQPLGVDDGVDYCHSGRIRRIDEDA
                     INRQLDNGAIVLMGPVAVSVTGESFNLTSEEIATQLAVKLKAEKMIGFCSSQGVTNSE
                     GGIISELFPNEAQARVEELEAQGDYNSGTVRFLRGAVKACRSGVRRCHLISYQEDGSL
                     LQELFSRDGIGTQIVMESAEQIRRATINDIGGILELIRPLEQQGILVRRSREQLEMEI
                     DKFTIIQRDNMTIACAALYPFVEEKIGEMACVAVHPDYRSSSRGEVLLERVAAQARQM
                     GLRKLFVLTTRSIHWFQERGFTPVDIELLPESKKKMYNYQRRSKVLMADLG"
     gene            2788..4041
                     /gene="amiC"
                     /locus_tag="MOX77_001163"
     CDS             2788..4041
                     /gene="amiC"
                     /locus_tag="MOX77_001163"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase AmiC"
                     /protein_id="HCA3356758.1"
                     /translation="MSGANSAISRRRLLQGAGAMWLLSVSQVGLAAVSQVVAVRIWPA
                     SSYTRVTVESNRLLKYKQFALSNPDRVVVDIEDVNLNSVLKGIGAQIRSDDPYIKSAR
                     VGQFDPKTVRMVFELKQNVKPQLFALAPVAGFKERLVIDLYPANAQDMQDPLLALLED
                     YNKGDLDKQVPPSQSGPQPGKAGRDRPIVIMLDPGHGGEDPGAIGKYKTREKDVVLQI
                     ARRLRALIEKEGNMKVYMTRNEDIFIPLKVRVAKAQKQRADLFVSIHADAFTSRQPSG
                     SSVFALSTKGATSTAAKYLAQTQNASDLIGGVSKSGDRYVDHTMFDMVQSLTIADSLK
                     FGKAVLKQLGKINDLHKNKVEQAGFAVLKAPDIPSILVETAFISNIEEERKLKTATFQ
                     QQVAESILAGIKAYFADGATLARRS"
     gene            complement(4151..4227)
                     /locus_tag="MOX77_001164"
     tRNA            complement(4151..4227)
                     /locus_tag="MOX77_001164"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4191..4193),aa:Met,seq:cat)
     gene            complement(4257..4333)
                     /locus_tag="MOX77_001165"
     tRNA            complement(4257..4333)
                     /locus_tag="MOX77_001165"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4297..4299),aa:Met,seq:cat)
     gene            4541..5638
                     /gene="mltA"
                     /locus_tag="MOX77_001166"
     CDS             4541..5638
                     /gene="mltA"
                     /locus_tag="MOX77_001166"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008785702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase A"
                     /protein_id="HCA3356759.1"
                     /translation="MKGRWAKYVATGVMLAMLAACSSKPTDRGQQYKDGKFTQPFSLV
                     NQPDAVGAPINAGDFAEQVDQIRSASPRLYTNQSNVYNAVQNWLRSGGDTRTMRQFGI
                     DAWQMEGTDNYGNVQFTGYYTPVVQARHTRQGAFQYPIYSMPPKRGRLPSRAQIYAGA
                     LSDKYILAWSNSLMDNFIMDVQGSGYIDFGDGSPLNFFSYAGKNGWPYRSIGKVLIDR
                     GEVKKEDMSMQAIREWGEKHSEAEVRELLEQNPSFVFFKPQSFAPVKGASAVPLIGRA
                     SVASDRSIIPPGTTLLAEVPLLDNNGKFSGQYELRLMVALDVGGAIKGQHFDIYQGIG
                     PDAGHRAGWYNHYGRVWVLKSAPGAGNVFSG"
     gene            5747..6553
                     /gene="tcdA"
                     /locus_tag="MOX77_001167"
     CDS             5747..6553
                     /gene="tcdA"
                     /locus_tag="MOX77_001167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA cyclic N6-threonylcarbamoyladenosine(37)
                     synthase TcdA"
                     /protein_id="HCA3356760.1"
                     /translation="MSVVISDAWRQRFGGTARLYGEKALQRFAEAHICVVGIGGVGSW
                     AAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRV
                     TVIDDFITPDNVAGYMDAGFTYVIDAIDSVRPKAALIAYCRRYKVPLVTTGGAGGQID
                     PTQIQVADLAKTIQDPLAAKLRERLKHNFGVVKNSKGKLGVDCVFSTEALVYPQADGS
                     VCAMKATAEGPKRMDCASGFGAATMVTATFGFVAVSHALKKIMAKAARQE"
     gene            complement(6605..7492)
                     /gene="rarD"
                     /locus_tag="MOX77_001168"
     CDS             complement(6605..7492)
                     /gene="rarD"
                     /locus_tag="MOX77_001168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461905.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter RarD"
                     /protein_id="HCA3356761.1"
                     /translation="MFVVLAFILWGLTPLYYQYLSGGNLAQILIYRVFWSIPLLLAVR
                     LLFRQRTRFHDAWKDKKSFFFCMIAGLLMIVSWSSFIYALTHHLVLDASLGYFINPLF
                     VIALGCIFLKEKLSLFQAIAVFSGVCGLTFQIIMLRHFPALALTMGLSFALYGLARKF
                     IHYDVMTSITIETLWALPVSLLIFLFSDTGPIISANTPFFLYVMTAPVTIIPLVLFAI
                     ALNHTSLIVTGLAQYIEPSLQFLLAIMIFGEHINYAELLCFCAVWFGLFLCISENLYS
                     HYLRARLKPVFGRVQRFFR"
     gene            complement(7792..8235)
                     /gene="csdE"
                     /locus_tag="MOX77_001169"
     CDS             complement(7792..8235)
                     /gene="csdE"
                     /locus_tag="MOX77_001169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase sulfur acceptor subunit
                     CsdE"
                     /protein_id="HCA3356762.1"
                     /translation="MTNPLYTGHPFGTTVTEETLRAIFLPLTQWEDKYRQLILLGKQL
                     PALPDECKAQAKEIAGCENRVWLGFTRSDNGTMHFFGDSEGRIVRGLLAVLLTAVEGK
                     NAAELQARSPLALFDELGLRAQLSASRSQGLNALSEAIVAATHKG"
     gene            complement(8235..9440)
                     /gene="csdA"
                     /locus_tag="MOX77_001170"
     CDS             complement(8235..9440)
                     /gene="csdA"
                     /locus_tag="MOX77_001170"
                     /EC_number="3.13.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase CsdA"
                     /protein_id="HCA3356763.1"
                     /translation="MNAFNPTQFRAQFPALADAGVYLDSAATALKPQAVIDATHQFYC
                     LSAGNVHRSQFAQAQRLTAQYEAARAKAARLLNAPDEKSIVWTRGTTEAINMVAQCYA
                     RPRLRPGDEIIVSVAEHHANLVPWLMVAQQTGAQVIKLPLNDRRLPDVERLPELITSR
                     SRILALGQMSNVTGGCPDLTGAISAAHAAGMVVMIDGAQGAVHFPADVQQLDIDFYAF
                     SAHKLYGPTGIGVLYGKPELLEAMSPWLGGGKMIRDVSFEGFTTQSAPWKLEAGTPNV
                     AGVIGLSAALEWLSDIDIEQAENWSRGLATLAEDALAKRPGFRSFRCQDSSLLAFDFV
                     GVHHGDMVTLLAEYGIALRAGQHCAQPLLAELGVTGTLRASFAPYNTQHDVDALVNAV
                     DRALELLVD"
     gene            9633..9860
                     /locus_tag="MOX77_001171"
     CDS             9633..9860
                     /locus_tag="MOX77_001171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgdI/YgdR family lipoprotein"
                     /protein_id="HCA3356764.1"
                     /translation="MKKTAAIISACMLTFALSACSGPNYVMHTNDGRSIVTDGKPQTD
                     NDTGMISYKDANGNKQQINRTDVKEMVALEN"
     gene            10207..11124
                     /gene="gcvA"
                     /locus_tag="MOX77_001172"
     CDS             10207..11124
                     /gene="gcvA"
                     /locus_tag="MOX77_001172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system transcriptional
                     regulator GcvA"
                     /protein_id="HCA3356765.1"
                     /translation="MSKRLPPLNALRVFDAAARHLSFTRAAEELFVTQAAVSHQIKSL
                     EDFLGLKLFRRRNRSLLLTEEGQSYFLDIKEIFSQLTEATRKLQARSAKGALTVSLPP
                     SFAIQWLVPRLSSFNSAYPGIDVRIQAVDRQEDKLADDVDVAIFYGRGNWPGLRVEKL
                     YAEYLLPVCSPLLLTGEKPLKTPEDLAKHTLLHDASRRDWQAYTRQLGLNHINVQQGP
                     IFSHSAMVLQAAIHGQGIALANNVMAQSEIEAGRLVCPFNDVLVSKNAFYLVCHDSQA
                     ELGKIAAFRQWILAKAATEQEKFRFRYEQ"
     gene            11143..11538
                     /locus_tag="MOX77_001173"
     CDS             11143..11538
                     /locus_tag="MOX77_001173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF423 domain-containing protein"
                     /protein_id="HCA3356766.1"
                     /translation="MTSRFMLIVAAISGFIYVALGAFGAHVLSKTLGVVEMGWIQTGL
                     QYQAFHTLAIFGLAVAMQRRISIWFYWSSVFLALGTVLFSGSLYCLALSHLRLWAYIT
                     PVGGVSFLVGWALLLIGAIRMKRKGASHE"
     gene            11531..12631
                     /gene="rlmM"
                     /locus_tag="MOX77_001174"
     CDS             11531..12631
                     /gene="rlmM"
                     /locus_tag="MOX77_001174"
                     /EC_number="2.1.1.186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010435097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (cytidine(2498)-2'-O)-methyltransferase
                     RlmM"
                     /protein_id="HCA3356767.1"
                     /translation="MNKVVLLCRPGFEKECAAEITDKAGKREIFGFARVKENAGYVIY
                     ECYQPEDGEKLISELPFSSLIFARQWFVVGELLQHLPPEDRITPIVGMLQGVVEKGGE
                     LRVEVADTNESKELMKFCRKFTVPLRAALRDAGVLTNYETPKRPVVHVFFIAPGCCYT
                     GYSFAHNNSPFYMGIPRLKFPSDAPSRSTLKLEEALHVFIPEDEWDERLANGMYAVDL
                     GACPGGWTYQLVKRNMWVYSVDNGPMAQSLMDTGQVTWLREDGFRYRPNRNNISWMVC
                     DMVEKPAKVTALMAQWLVNGWCRETIFNLKLPMKKRYEEVSHNLAYLQAQLDEHGVNA
                     QIQARQLYHDREEVTVHVRRLWAAVGGRRDER"
     gene            complement(12690..13400)
                     /gene="fucR"
                     /locus_tag="MOX77_001175"
     CDS             complement(12690..13400)
                     /gene="fucR"
                     /locus_tag="MOX77_001175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose operon activator"
                     /protein_id="HCA3356768.1"
                     /translation="MKAARQQAIVDLLINHKSLTTEALATRLNVSKETIRRDLSELQT
                     QGKVLRNHGRAKYIHRENQDSGDPFHIRLKSHYAHKADIAREALAWIEEGMTIALDAS
                     STCWYLARQLPDIPIQVFTNSHPICQELGKRERIALISSGGQLERKYGCYVNPSLISQ
                     LKSLDIDLFIFSCEGIDGGGDLWDSNAINADFKSILLRRASQSLLLIDKSKFNRSGEA
                     RIGHLDDVTHIVSDAPQS"
     gene            complement(13458..13880)
                     /gene="fucU"
                     /locus_tag="MOX77_001176"
     CDS             complement(13458..13880)
                     /gene="fucU"
                     /locus_tag="MOX77_001176"
                     /EC_number="5.1.3.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose mutarotase"
                     /protein_id="HCA3356769.1"
                     /translation="MLKTISPLISPTLLKVLAEMGHGDEIIFSDAHFPAHSLGPQVIR
                     ADGLSVSDLLRAIIPLFELDSYAPPLVMMAAVEGDTLDPSVEARYRDALSLEAPCPDI
                     VRIDRYAFYERAQKAFAIVITGECAKYGNILLKKGVTP"
     gene            complement(13882..15300)
                     /gene="fucK"
                     /locus_tag="MOX77_001177"
     CDS             complement(13882..15300)
                     /gene="fucK"
                     /locus_tag="MOX77_001177"
                     /EC_number="2.7.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fuculokinase"
                     /protein_id="HCA3356770.1"
                     /translation="MKQDVILVLDCGATNVRAIAVDRQGKIVARASTANASDIAAENS
                     AWHQWSLDAILQRFADCCRSLSSALSECVVRGITVTTFGVDGALVDAQGKLLYPVISW
                     KCPRTAAVMETIERFISPRQLQTLSGVGAFSFNTLYKLVWLKENHPRLLEQAHCWLFI
                     SSLINHRLTGEFTTDITMAGTSQLLDIHQRDFSPEILQATGLARRLFPRIVEAGAPIG
                     TLQTDAARLLGLPAGVPVISAEHDTQFALFGAGAQQGEPVLSSGTWEILMVRSGQVDT
                     SLLSQYPGSTCELDSQSGLYNPGMQWLASGVLEWVRKLLWTPETPWQTLIDEARAIPA
                     GAEGVRMQCDLLACQNAGWQGVTLNTTRGHFYRAALEGLTAQLQRNLRTLEKIGHFNA
                     TELLLVGGGSRNALWNQIKANQLDIPIKVLDDAETTVAGAAMFGWYGVGEFSSPEQAR
                     AQVNYQYRYFWPQTEPEIIEGV"
     gene            complement(15446..17176)
                     /gene="fucI"
                     /locus_tag="MOX77_001178"
     CDS             complement(15446..17176)
                     /gene="fucI"
                     /locus_tag="MOX77_001178"
                     /EC_number="5.3.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose isomerase"
                     /protein_id="HCA3356771.1"
                     /translation="MKKISLPKIGIRPVIDGRRMGVRESLEEQTMNMAKATAALITEK
                     IRHACGAQVECVIADTCIAGMAESAACEEKFSSQNVGVTITVTPCWCYGSETIDMDPM
                     RPKAIWGFNGTERPGAVYLAAALAAHSQKGIPAFSIYGHDVQDADDTSIPADVEEKLL
                     RFARAGLAVASMKGKSYLSVGGVSMGIAGSIVDHNFFESWLGMKVQAVDMTELRRRID
                     QKIYDEAELEMALAWADKNFRYGEDQNASQYKRNEAQNRAVLKESLLMAMCIRDMMQG
                     NKTLADKGLVEESLGYNAIAAGFQGQRHWTDQYPNGDTAEALLNSSFDWNGVREPFVV
                     ATENDSLNGVAMLFGHQLTGTAQIFADVRTYWSPEAVERVTGQALSALAEHGIIHLIN
                     SGSAALDGACKQRDSEGKPTMKPHWEISQQEADACLAATEWCPAIHEYFRGGGYSSRF
                     LTEGGVPFTMTRVNIIKGLGPVLQIAEGWSVELPKAMHDQLDARTNSTWPTTWFAPRL
                     IGKGPFTDVYSVMANWGANHGVLTIGHVGADFITLAAMLRIPVCMHNVEEAKIYRPSA
                     WAAHGMDIEG"
     gene            complement(17208..18524)
                     /gene="fucP"
                     /locus_tag="MOX77_001179"
     CDS             complement(17208..18524)
                     /gene="fucP"
                     /locus_tag="MOX77_001179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose:H+ symporter permease"
                     /protein_id="HCA3356772.1"
                     /translation="MGNTTIQTQSFRAVDAEQSKSKRYIIPFALLCSLFFLWAVANNL
                     NDILLPQFQQAFTLTNFQAGLIQSAFYFGYFVIPIPAGILMKKLSYKAGIITGLFLYA
                     FGAALFWPAAEIMNYTLFLIGLFIIAAGLGCLETAANPFVTALGPESGGHFRLNLAQT
                     FNSFGAIIAVVFGQSLILSNVPHQSQEALDKMTPDQLSAYKHSLVLSVQTPYMIIVAI
                     VLVVALLIMLTKFPALQSDDHSDAKQSSFLSSLSRLIRIRHWRWAVLAQFCYVGAQTA
                     CWSYLIRYAIEEIPGMTPGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALL
                     AMLLCLISAFSGGHIGLLALTLCSAFMSIQYPTIFSLGIKNLGQDTKYGSSFIVMTII
                     GGGIVTPVMGFVSDAAGKIPTAELVPALCFAVIFIFARFRSQAATN"
     gene            19080..19727
                     /gene="fucA"
                     /locus_tag="MOX77_001180"
     CDS             19080..19727
                     /gene="fucA"
                     /locus_tag="MOX77_001180"
                     /EC_number="4.1.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fuculose-phosphate aldolase"
                     /protein_id="HCA3356773.1"
                     /translation="MERNRLARQIIDTCLEMTRLGLNQGTAGNVSVRYQGGMLITPTG
                     IPYEKLTESHIVFIDADGQHEQGKLPSSEWRFHMAAYQTRPDANAVVHNHAVHCTAVS
                     ILNRPIPAIHYMIAAAGGNSIPCAPYATFGTRELSDHVAVALKNRKATLLQHHGLIAC
                     EENLDKALWLAHEVEVLAQLYLSTLAIVDPVPVLDDEAIAIVLEKFKTYGLRIEE"
     gene            19744..20892
                     /gene="fucO"
                     /locus_tag="MOX77_001181"
     CDS             19744..20892
                     /gene="fucO"
                     /locus_tag="MOX77_001181"
                     /EC_number="1.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactaldehyde reductase"
                     /protein_id="HCA3356774.1"
                     /translation="MANRMILNETAWFGRGAVDALTDEVTRRGYHKALIVTDKTLVQC
                     GVVDKVTSRMDAAGLAWEIYAGVIPNPTISVVQEGLKVFTQSGADYLIAIGGGSPQDT
                     CKAVGIISNNPEFADVRSLEGLSPTRKPSVPIMAIPTTAGTAAEVTINYVITDEEKRR
                     KFVCVDPHDIPQAAFIDADMMDGMPPALKAATGVDALTHAIEGYITRAAWALTDALHI
                     KAIEIIAGALRGAVAGEKEAGEAMALGQYVAGMGFSNVGLGLVHGMAHPLGAFYNTPH
                     GVANAILLPHVMRFNAGSTNEKFRDIARAMGVKVEGLSLEEARNAAVEAVFTLNRDVG
                     IPLHLRDVGVRKEDIPALAQAAFDDVCTGGNPREASLADIVELYHTAW"
     gene            complement(20984..21739)
                     /gene="xni"
                     /locus_tag="MOX77_001182"
     CDS             complement(20984..21739)
                     /gene="xni"
                     /locus_tag="MOX77_001182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417278.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flap endonuclease Xni"
                     /protein_id="HCA3356775.1"
                     /translation="MAAHLLIVDALNLIRRIHAVQGSPCVETCQHALDQLIIHSQPTH
                     AVAVFDDDARSSGWRHQRLPDYKAGRPPMPDDLHNEMPALRAAFEQRGVRCWASDGNE
                     ADDLAATLALKVTEAGHQATIVSTDKGYCQLLSPGLRIRDYFQKRWLDAPFIEKEFGV
                     LPRQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVQFQNLEGIYAHLDEVPEKWRKKL
                     ETHKEMAFLCRDIARLQTDLHIDGNLQQLRLVR"
     gene            complement(21910..23277)
                     /gene="sdaB"
                     /locus_tag="MOX77_001183"
     CDS             complement(21910..23277)
                     /gene="sdaB"
                     /locus_tag="MOX77_001183"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461891.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase II"
                     /protein_id="HCA3356776.1"
                     /translation="MISVFDIFKIGIGPSSSHTVGPMKAGKQFTDDLIARHILTDVTR
                     VVVDVYGSLSLTGKGHHTDIAIIMGLAGNLPDTVDIDAIPSFIQDVNTHGRLLLANGQ
                     HEVEFPVDKCMNFHADNLSLHENGMRITALAGNKVLYSQTYYSIGGGFIVDEEHFGLT
                     NSEPVNVPYPYKTAADLQRHCQETGLSLSGLMMQNELALHSKEALEQHFAKVWEVMRS
                     GIERGITTEGVLPGKLRVPRRAAALRRMLVSQDKTTTDPMAVVDWINMFALAVNEENA
                     AGGRVVTAPTNGACGIVPAVLAYYDKFIREVNANSLARYMLVASAIGSLYKMNASISG
                     AEVGCQGEVGVACSMAAAGLAELLGGSPAQVCIAAEIAMEHNLGLTCDPVAGQVQVPC
                     IERNAIASVKAVNAARMALRRTSEPRVCLDKVIETMYETGKDMNAKYRETSRGGLAMK
                     IVTCD"
     gene            complement(23336..24625)
                     /gene="sdaC"
                     /locus_tag="MOX77_001184"
     CDS             complement(23336..24625)
                     /gene="sdaC"
                     /locus_tag="MOX77_001184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAAAP family serine/threonine permease SdaC"
                     /protein_id="HCA3356777.1"
                     /translation="MKTTQTSTIASIDSRSAWRKTDTMWMLGLYGTAIGAGVLFLPIN
                     AGVGGMIPLIIMAILAFPMTFFAHRGLTRFVLSGKNPGEDITEVVEEHFGIGAGKLIT
                     LLYFFAIYPILLVYSVAITNTVESFLTHQLAINPPPRAILSLILIVGMMTIVRFGEQM
                     IVKAMSILVFPFVAALMLLALYLIPQWNGAALETLSFDSAASTGNGLWMTLWLAIPVM
                     VFSFNHSPIISSFAVAKREEYGEGAEKKCSKILAFAHIMMVLTVMFFVFSCVLSLTPA
                     DLAAAKEQNISILSYLANHFNAPIIAWMAPIIAMIAITKSFLGHYLGAREGFNGMVIK
                     SLRGKGKSIEINKLNKITALFMLVTTWIVATLNPSILGMIETLGGPIIAMILFLMPMY
                     AIQKVPAMRKYSGHISNVFVVIMGLIAISAIFYSLFS"
     gene            complement(25190..26554)
                     /gene="ppnN"
                     /locus_tag="MOX77_001185"
                     /gene_synonym="ygdH"
     CDS             complement(25190..26554)
                     /gene="ppnN"
                     /locus_tag="MOX77_001185"
                     /gene_synonym="ygdH"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide 5'-monophosphate nucleosidase"
                     /protein_id="HCA3356778.1"
                     /translation="MITHISPLGSMDMLSQLEVDMLKRTASSDLYQLFRNCSLAVLNS
                     GSLTDNSKELLSCFENFDINVLRRERGVKLELINPPEDAFVDGRIIRALQANLFAVLR
                     DILFVNGQIHNAGRFQHLDLESSTHITNLVFSILRNARALHVGEAPNMVVCWGGHSIN
                     ENEYLYARRVGTQLGLRELNICTGCGPGAMEAPMKGAAVGHAQQRYKDSRFIGMTEPS
                     IIAAEPPNPLVNELIIMPDIEKRLEAFVRIAHGIIIFPGGVGTAEELLYLLGILMNPA
                     NKNQVLPLILTGPKESADYFRVLDEFITHTLGEAARRHYRIIIDDAAEVARLMKKAMP
                     QVKENRRDTGDAYSFNWSMRIAPDLQVPFEPSHENMANLKLYPDQPVEILAADLRRAF
                     SGIVAGNVKEVGIRAIEANGPYKIHGDREMMRRMDDLLQGFVAQHRMKLPGSAYIPCY
                     EICA"
     gene            complement(26668..27516)
                     /gene="queF"
                     /locus_tag="MOX77_001186"
     CDS             complement(26668..27516)
                     /gene="queF"
                     /locus_tag="MOX77_001186"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 7-cyano-7-deazaguanine reductase
                     QueF"
                     /protein_id="HCA3356779.1"
                     /translation="MSSYENHQALDGLTLGKSTDYRDNYDASLLQGVPRSLNRDPLGL
                     TADNLPFHGADIWTLYELSWLNSQGLPQVAVGHVELDYTSVNLIESKSFKLYLNSFNQ
                     TRFDTWETVRQTLERDLRACAQGNVSVRLHRLDELEGQPVAHFHGTCIDDQDISIDNY
                     QFTTDYLQHAVSGEKQVEETLVSHLLKSNCLITHQPDWGSIQIQYRGRKIDREKLLRY
                     LVSFRHHNEFHEQCVERIFNDILRFCQPETLSVYARYTRRGGLDINPWRSNTDFVPAT
                     GRLARQ"
     gene            27585..28130
                     /gene="syd"
                     /locus_tag="MOX77_001187"
     CDS             27585..28130
                     /gene="syd"
                     /locus_tag="MOX77_001187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SecY-interacting protein"
                     /protein_id="HCA3356780.1"
                     /translation="MDELTAQALKAFTTRYCDAWQEKHGSWPLSEELYGVPSPCIISS
                     TRDAVYWQPQPFEGEENVNAVERAFDIMVQPALHAFYTTQFAGDMPAQFADEKLTLLQ
                     TWSQDDFRRVQENLIGHLVTQKRLKLPPTLFIATQENELEVISVCNLSGEVIKETLGT
                     RNRTVLAATLAEFLTQLNPLL"
     gene            28740..29069
                     /locus_tag="MOX77_001188"
     CDS             28740..29069
                     /locus_tag="MOX77_001188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqcC family protein"
                     /protein_id="HCA3356781.1"
                     /translation="MTTHDRVRQQLHALETLLREHRHWRLDAPQAHLFTSTQPFFMDT
                     MEPLEWLQWVLIPRMHTLLDNAQPLPEAFAVAPYYEMALAADHPQREAILAVLQDLDA
                     LFVRDKS"
     gene            29069..29851
                     /gene="truC"
                     /locus_tag="MOX77_001189"
     CDS             29069..29851
                     /gene="truC"
                     /locus_tag="MOX77_001189"
                     /EC_number="5.4.99.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(65) synthase TruC"
                     /protein_id="HCA3356782.1"
                     /translation="MLEILYQDPWLVAVNKPAGWLVHRSWLDRDEKVVVMQTVRDQIG
                     QHVFTAHRLDRPTSGVLLMGLSSEAGRRLAQQFEQHHIRKRYHAIVRGWLIDDAVLDY
                     PLVEERDKIADKFAREDKAPQPAVTQYRGLATVEMAVPTGRYPTTRYGLVELEPKTGR
                     KHQLRRHLAHLRHPIIGDSKHGDLRQNRSAAEHFACRRLMLHASRLELTHPFTGQPLI
                     IQAGLDETWMQVLTQFGWRGLLPDNERVEFTAASRQDETHLT"
     gene            29870..30319
                     /locus_tag="MOX77_001190"
     CDS             29870..30319
                     /locus_tag="MOX77_001190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin"
                     /protein_id="HCA3356783.1"
                     /translation="MAEIGIFVGTMYGNSLLVAEEAEAILARQGHSATVFEDPELSDW
                     QQYQDKVALVVTSTTGQGDLPDSIAPLFHGIKDTLGFQPNLRYGVIALGDSSYPNFCN
                     GGKQFDALLQEQSAQRVGEILFIDASEHPEPESQSNPWVENWGTLLS"
     gene            complement(30469..30717)
                     /locus_tag="MOX77_001191"
     CDS             complement(30469..30717)
                     /locus_tag="MOX77_001191"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356784.1"
                     /translation="MQLLLGRLLCTLHAFIHWQEKYKKRATHTHRATTQYFGDELRLF
                     MAKAQDSGSHFTEMKSEGVGVDAGGVKREECETGRLIT"
     gene            30800..32158
                     /gene="gudP"
                     /locus_tag="MOX77_001192"
     CDS             30800..32158
                     /gene="gudP"
                     /locus_tag="MOX77_001192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactarate/glucarate/glycerate transporter
                     GudP"
                     /protein_id="HCA3356785.1"
                     /translation="MSSLSHAASSAEKRTNARYWIVVMLFIVTSFNYGDRATLSIAGS
                     EMAKDIGLDPVGMGYVFSAFSWAYVIGQIPGGWLLDRFGSKRVYFWSIFIWSVFTLLQ
                     GFVDIFSGFGIIVALFTLRFLVGLAESPSFPGNSRIVAAWFPAQERGTAVAIFNSAQY
                     FATVIFAPIMGWLTHEVGWSHVFFFMGGLGIIISFIWLKVIHEPNNHPGVNKKELEYI
                     AEGGALINMDQKDTKAKVPFSVKWGQIKQLLGSRMMIGVYIGQYCINALTYFFITWFP
                     VYLVQARGMSILKAGFVASVPAVCGFIGGVLGGIISDWLMRRTGFLNIARKTPIVLGM
                     LLSMVMVFCNYVNVEWMIIGFMVLAFFGKGIGALGWAVMADTAPKEISGLSGGLFNMF
                     GNISGIVTPIAIGYIVGTTGSFNGALIYVGVHALVAIISYLVLVGDIKRIELKPVAGQ
                     LS"
     gene            32155..33495
                     /locus_tag="MOX77_001193"
     CDS             32155..33495
                     /locus_tag="MOX77_001193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucarate dehydratase"
                     /protein_id="HCA3356786.1"
                     /translation="MTTQSSPVITDMKVIPVAGHDSMLLNIGGAHNAYFTRNIVVLTD
                     NAGHTGVGETPGGEVIYQTLVDAIPMVLGQEVARLNKVVQQVHKGNQAADFDTFGKGA
                     WTFELRVNAVAALEAALLDLQGQALNVPVCELLGPGKQRDAVTVLGYLFYIGDRTKTD
                     LPYLESTPGSHEWYRLRHQEALNSDAVVRLAEASQDRYGFKDFKLKGGVLPGEQEIDT
                     VRALKKRFPDARITVDPNGAWLLDEAIALCKGLNDVLTYAEDPCGAEQGFSGREVMAE
                     FRRATGLPVATNMIATNWREMGHAVMLNAVDIPLADPHFWTLTGAVRVAQLCDDWGLT
                     WGCHSNNHFDISLAMFTHVGAAAPGKPTAIDTHWIWQEGDCRLTKNPLEIKNGKIAVP
                     DAPGLGVELDWEQVRKAHDAYKKLPGGARNDAGPMQYLIPGWTFDRKRPVFGRH"
     gene            33516..34856
                     /gene="gudD"
                     /locus_tag="MOX77_001194"
     CDS             33516..34856
                     /gene="gudD"
                     /locus_tag="MOX77_001194"
                     /EC_number="4.2.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucarate dehydratase"
                     /protein_id="HCA3356787.1"
                     /translation="MSTQFTTPVVTEMQVIPVAGHDSMLMNLSGAHAPFFTRNIVIVK
                     DNSGHTGVGEIPGGEKIRKTLEDAIPLVVGKTLDEYKNVLTAVRNQFADRDAGGRGLQ
                     TFDLRTTIHVVTGIEAAMLDLLGQHLGVNVASLLGDGQQRSEVEMLGYLFFVGNRKVT
                     PLPYQSQPDEQCDWYRLRHEEAMTPETVVRLAEAAYEKYGFNDFKLKGGVLAGEEEAE
                     SIVALAKRFPQARVTLDPNGAWSLNEAISIGKYLKGSLAYAEDPCGAEQGFSGREVMA
                     EFRRATGLPTATNMIATDWRQMGHTLSLQSVDIPLADPHFWTMQGSVRVAQMCHEFGL
                     TWGSHSNNHFDISLAMFTHVAAAAPGKITAIDTHWIWQEGNQRLTKEPFEIKGGMVQV
                     PTKPGLGVELDMDQVMKAHELYQKHGLGARDDAMGMQYLIPGWTFDNKRPCMVR"
     gene            34934..>35204
                     /locus_tag="MOX77_001195"
     CDS             34934..>35204
                     /locus_tag="MOX77_001195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HCA3356788.1"
                     /translation="MKIVIAPDSYKESLSALEVATAIEQGFREIWPDADYLKLPLADG
                     GEGTVEAMVEATAGRIVHVEVTGPLGHRVNAFYGLSGDARSAFIEM"
BASE COUNT         8287 a         8975 c         9757 g         8185 t
ORIGIN      
        1 cgctgcaccg actgctgggc gcacagcccg gcagccagcg attacgccat catgcgggca
       61 acccgctgca tctggacgtg ctggtggtcg atgaggcatc aatgattgat ttgccgatga
      121 tgtcacgttt gattgacgct ctgccgccgc acgggcgggt catttttctt ggcgatcgcg
      181 atcagttggc atccgttgag gcgggcgctg tgttgggcga tatttgcgcc tatgtcaacg
      241 cagggtttac ggcggaacgc gcccgacagc taagtcgact cactggtagc gccattccgg
      301 cgggggccgg aacgcaagcc gcgtctttac gcgatagcct ctgtttgttg caaaagagct
      361 accgtttcgg cagcgattct ggcatcggca agctggcggc ggcaattaac tgtggcgaca
      421 ggtcggcaat ccaggctgtt tttcagcagg ggtttagcga tatagagaag cgtacattgc
      481 aaagcagcga cgattatgcc gggatgctgg atgaagcgct ggcgggctat gggcgctacc
      541 tgcggttgct gcatgaaaaa gcggcgccgg aggcaatcct tcaggctttc aatgagtatc
      601 aactgctttg tgcgctgcgc gaaggcccat ttggcgtgag gggactgaat gaccgcattg
      661 agcaggcgat ggtgcagcaa cgaaaaattc agcggcatcc gcactctcgc tggtatgaag
      721 ggcgtccggt aatgattgcg cgcaacgata gcgcgttggg gctatttaac ggcgatattg
      781 gtattgcgct cgatcgcggg caggggttac gcgtctggtt tgtgatgccg gacggcacga
      841 tcaagtccgt tcagcccagc cgtctgccgg aacatgatac aacctgggcg atgacggtac
      901 ataaatcaca ggggtctgaa tttgatcacg ccgcgctgat tttacccagc caacgttcgc
      961 cggtcgtgac gcgggagctg gtgtataccg ctgttacgcg ggcgcggcgg cggttatcgc
     1021 tgtatgccga tgaacggatc ctggcaggcg cgattgtgac gcgaacggaa cggcgcagcg
     1081 ggttagccac cttatttgat gaagtcagtc gtatcggata agacgagttc tcgccggatg
     1141 gcgacgcgta gcgtcttatc cggcctccaa atgatgcttt cgagcgtagg cctgataagc
     1201 gcagcgccat caggcccccc ttgttatcct aaatctgcca tcagcacctt tgaacgtcgc
     1261 tgatagttat acattttttt cttgctctca ggcagtaact caatatcgac aggcgtaaaa
     1321 ccgcgctcct ggaaccagtg aatactgcgc gtcgtcaaca caaacaattt acgcagcccc
     1381 atttgccgtg cctgggcggc aacccgctcc agaagcactt ctccacgcga tgagctgcga
     1441 taatccggat gtaccgctac gcaggccatt tcgcctattt tctcttccac aaaaggatac
     1501 agcgccgcgc aagcgatagt catattatcg cgctgaataa tggtaaattt atcgatctcc
     1561 atctccagtt gttcacggga acggcgtacc agaatgccct gctgttccag tgggcggata
     1621 agctccagaa taccgccaat atcgttgatg gtagcgcggc ggatctgctc ggcgctctcc
     1681 atgacgatct gcgtaccgat accatcacgc gagaacaatt cctgtaatag cgagccatct
     1741 tcctgatagc tgatcagatg gcaacgacga acgccgctac gacaggcttt taccgcgccg
     1801 cgcaaaaaac gtacggttcc ggagttgtaa tcgccctgcg cttccaactc ttccacccgc
     1861 gcctgcgctt cattcgggaa gagttcagaa atgatgccgc cctcgctatt ggtaacgccc
     1921 tgagaagaac agaaaccgat cattttttcc gctttcagtt taacggcgag ttgagtggca
     1981 atctcttctg aggtcagatt aaaactttcg ccggtcactg agacggcgac cggccccatc
     2041 agaacgatcg cgccgttatc caactggcgg ttgatcgcat cttcatcaat gcgccggata
     2101 cggccgctat gacagtagtc cacgccatca tcaacgccca gcggctgcgc aatggtgaaa
     2161 ttgccgctga cgacattaat gtgcgcgccc tgcaacggcg tattgttcag actcatcgac
     2221 agacgggcgg taatatcaag ctggagtaaa ccggcggcct gtttcaccag ctccagtgtt
     2281 ttggcgtccg tcacccgtgt gtttttgtgg taaatcggtt catgatgatg cgcggccaga
     2341 ttggcgtcga tttgcggtcg cgcgccatac accacgacaa ggcgaatacc gaggctatgc
     2401 agtagcccga tatcgctaac gatgctggaa aaattgtcat gctcaatggc ttcgccgccg
     2461 agcataatga caaaggtttt tccgcgatgg gtattgatat agggaactga atggcgaaac
     2521 ccttctacca gttcggtttt acgttccttt atcattgcgc gccccactag tgaattatta
     2581 ttcgaaatta gtgtattttt attctgtttt tgccctctgt gcaagcgtaa attttatgcg
     2641 gtccgatcgc ttttcttagt aatgccgtga atataaaaag aatgtttacc cttttataga
     2701 tgacagatta tgcgtcattc gctaaagttt ccggtcaatt tggatgaact ttgtatgatc
     2761 tctatttagt ttttgctcgg gagaagcatg tcgggagcca attcagcaat cagccgtcgc
     2821 cgtttactac aaggcgcggg cgccatgtgg ctattaagcg tgagccaggt cgggctggct
     2881 gccgtaagcc aggtcgttgc ggtgcgtatc tggcctgcgt ccagctatac ccgcgtcacg
     2941 gtagagtcga atcgtctgct gaaatataaa caatttgcct taagtaaccc ggaccgcgtg
     3001 gtggtagata ttgaggatgt gaatctgaac tcggtgctta aaggcattgg cgcgcagatt
     3061 cgcagcgacg atccgtatat caaatccgca agggtagggc agtttgatcc taagactgtg
     3121 cgtatggtct ttgagctaaa acaaaacgtg aagccgcagc tatttgcgct ggcgcctgtg
     3181 gcaggcttta aagaacgtct ggtgatagat ctttatcctg ctaatgcgca ggatatgcag
     3241 gatccgctgc tggcgctgct ggaagactac aataaaggcg atctggataa acaggtgccg
     3301 ccttcgcaaa gcgggccgca gcccggtaaa gcggggcgcg atcgtcccat tgtcattatg
     3361 cttgatccgg gacacggcgg cgaagaccct ggcgcgatag gcaaatacaa aacgcgtgaa
     3421 aaagacgtgg tgctccagat agcccgccgc ctgcgcgcgt tgatcgaaaa agaaggcaac
     3481 atgaaggtct atatgacgcg caatgaagac atcttcattc cgttaaaagt ccgggtggcg
     3541 aaagcgcaga aacagcgcgc cgacctgttt gtctctattc atgcggatgc cttcaccagc
     3601 cggcagccta gcggttcatc cgtattcgcg ctatcgacta aaggcgccac cagtactgcg
     3661 gcgaaatatc tggcgcaaac gcagaacgcc tcggacttaa ttggcggcgt gagcaaaagc
     3721 ggtgaccgtt atgtcgacca tacgatgttc gatatggtgc aatcgctgac cattgccgat
     3781 agtttgaaat tcggtaaagc ggtgttgaag cagcttggta aaattaatga cctgcataaa
     3841 aacaaggtcg agcaggcggg gtttgcggtg ttaaaggcgc ccgatattcc gtctattctg
     3901 gtcgagacgg cgtttatcag taacattgaa gaagaacgca agctcaagac cgcgacgttc
     3961 cagcaacagg tcgcagagtc gattctggcg ggcattaaag cctattttgc cgatggggcg
     4021 acgctggcga gaagaagtta acctgagatg acggcgagtt tattgcgcgg gtaagtagga
     4081 tgctgcccgc actgtcgttg cggaccagat gacagataca aaaaaacacc cgtaagggtg
     4141 ttcattaagt tggttgcggg ggccggattt gaaccgacga ccttcgggtt atgagcccga
     4201 cgagctacca ggctgctcca ccccgcgtcc gtctaaactt gcattctcat tgtaattggt
     4261 tgcgggggcc ggatttgaac cgacgacctt cgggttatga gcccgacgag ctaccaggct
     4321 gctccacccc gcgtccgtgg atgcgcacta tactccgctg agcttttgtt gcaacccttt
     4381 tttcatataa atcgctaatt tctcatgaat tgcgcaaata caccgcagat agcgcgattt
     4441 ttaaacgaat ttacataatg agatcgcgat cgcatttcat tacttcggac ggtttgttat
     4501 cttcaccggg cactttcgat tacgcagaag acgagacacc atgaaaggac gttgggcaaa
     4561 atatgtggcg acaggcgtaa tgctggcaat gctggctgcc tgttcatcaa aaccgaccga
     4621 tcgcggtcag caatataagg acgggaaatt tacccagccc ttctccctgg taaaccagcc
     4681 ggacgcggtg ggcgcgccga ttaatgctgg tgactttgcc gagcaggtcg accagatccg
     4741 ttccgcgtcg ccgcgtttat acaccaatca aagcaacgtc tataacgctg tccagaactg
     4801 gttacgttcc ggaggcgata cgcgcactat gcgtcagttt ggtatcgatg cctggcagat
     4861 ggaaggcacc gacaactacg gtaacgtcca gttcacgggc tactatacgc ccgtcgttca
     4921 ggctcgccat acgcgccagg gcgcgttcca gtaccctatc tatagtatgc cgccaaaacg
     4981 cggacgctta ccgtcccgcg cccagatcta cgcaggcgcg ctgagcgata agtacatcct
     5041 ggcctggagt aattcgctga tggataactt tattatggat gtccagggca gcggttatat
     5101 tgatttcggt gatggtagtc cgctgaactt ctttagttat gccggtaaaa atggctggcc
     5161 ttatcgcagt attggtaaag tgcttatcga tcgcggtgaa gtgaaaaaag aagatatgtc
     5221 gatgcaggct atacgcgaat ggggagagaa gcacagcgaa gcggaagtgc gtgaattact
     5281 ggagcagaac ccgtcgttcg tcttctttaa accgcaatct tttgcgccgg tcaaaggcgc
     5341 cagcgctgta ccgctgattg ggcgagcatc cgtcgcctcc gaccgcagca tcattccgcc
     5401 gggcacaacc ttgttggcgg aagtaccgtt gctggataac aacggtaaat ttagcggtca
     5461 gtatgagcta cgtttgatgg tcgcactgga tgtcggcgga gcgattaaag gccagcactt
     5521 tgatatttac caggggattg gcccggatgc cgggcatcgt gccggatggt ataatcacta
     5581 tggtcgcgtc tgggtgttaa aaagcgcgcc gggcgccggt aacgtgttta gcggctgatt
     5641 gtggtattct gcgacaaccg gattgcccga taacgcgatt gctatcgggc ctgaaaatag
     5701 tgagcagggg tgaggaataa cctcaccttt tttattctga ggtcatatgt cagtggtgat
     5761 aagtgatgcc tggcgccaac gctttggcgg caccgcgcgt ctgtacggtg aaaaagcgct
     5821 gcagcggttt gctgaggcgc atatctgcgt cgtgggaatc ggcggggtag gatcatgggc
     5881 ggcagaggcg ctggcgcgta cgggcatcgg cgcgattacg ctgattgata tggacgatgt
     5941 ctgcgtgacc aatacgaacc gtcagatcca tgcgttgcgt gataacgttg ggttggcgaa
     6001 agcggaagtg atggccgaac ggattcggca aattaacccg gagtgccggg taacggttat
     6061 cgatgatttc atcacgccgg ataatgtggc gggttatatg gacgcgggtt ttacctatgt
     6121 cattgacgcc attgacagcg ttcgtccaaa agccgcgctg attgcgtact gtcgccgata
     6181 taaggttcct ttagtaacca ctggcggcgc gggcgggcag atcgatccga cgcaaatcca
     6241 ggtcgctgat ttggcgaaaa ctatccagga tccgctggcg gcaaaactgc gtgagagatt
     6301 gaaacataat tttggcgtag tgaagaacag taaaggtaag ctgggcgtgg actgcgtttt
     6361 ttccaccgaa gcgctggttt acccacaggc ggacggttcc gtatgcgcga tgaaagctac
     6421 cgcagaaggg ccaaaacgga tggattgcgc ctctggcttc ggcgcggcga cgatggtaac
     6481 ggcaacgttc ggttttgtcg ccgtttccca tgcgctgaag aagatcatgg ctaaagcggc
     6541 gcgacaagaa taaaaggacg gggcggagtg tcacgcagac gcgtatccgg ccctgcgccc
     6601 tttgttagcg aaagaagcgc tgtaccctgc cgaacaccgg tttcagacgg gcgcggagat
     6661 aatgggaata taaattttca gatatgcata gaaacagccc gaaccatact gcacaaaagc
     6721 agagcagttc cgcgtaatta atgtgctcgc caaatatcat aatggcaagt aagaactgta
     6781 aagacggctc tatatattgc gccagtccgg tgacaatcaa cgaggtgtga tttaacgcga
     6841 tggcaaataa taccagtgga atgatcgtca ctggcgccgt catgacatac aaaaagaaag
     6901 gagtattagc ggatataatt ggtccagtat cgctaaagag aaaaattaat agtgagacag
     6961 gcaatgccca taatgtttca atcgttatcg atgtcatcac atcataatgt ataaactttc
     7021 gcgccaggcc atatagcgca aatgataatc ccatggttag cgccagcgcc gggaaatgcc
     7081 gtagcatgat aatttgaaaa gtcaggccac agacaccaga aaaaacggcg atggcctgaa
     7141 acaacgacag tttttcttta agaaaaatgc atcccagcgc aataacaaat agcgggttga
     7201 taaaatagcc gaggctggca tcaagtacca gatgatgggt tagcgcataa atgaaagatg
     7261 accatgagac aatcatcaaa agtccggcga tcatgcagaa gaaaaaggat tttttatctt
     7321 tccaggcatc atgaaatcgc gttcgctgcc gaaataacaa ccttactgcc agtaataatg
     7381 gaattgacca gaacacccgg tatatcaata tttgtgcgag atttccccct gataaatatt
     7441 gataatataa aggtgttaac ccccataata taaatgccag caccacaaac atggtaccgc
     7501 tacgcagata tttttccact tatccatatc ctgttataac ttcacccgat gcgtatgaat
     7561 tttccagttc tcctgctacg ctacatcgag tggttttatt tactctaaaa tcttcacgcc
     7621 attttaacat ggattctaac attgtaattt cattgtgata gctgataaaa atcaaaagaa
     7681 tgtttatcag ggaaatctga tgccgaaact aataaagtga ctggattatt ttatctgcat
     7741 cgcctgaccg ccgcggacgg cgctgtcagg cgacagaata tttacgctat ttcaaccctt
     7801 atgcgttgcg gcaacaatcg cttcgctcag cgcgttcagc ccctgactgc gtgaggcgct
     7861 aagctgggcg cgtaaaccca gctcatcaaa cagcgccagc ggtgaacgag cctgcaactc
     7921 ggcggcgttt tttccttcca ccgcggtgag caataccgct agcaggccgc ggacaatccg
     7981 cccctcactg tcgccgaaaa agtgcatcgt tccgttatct gatcgggtaa agcccagcca
     8041 gacgcggttc tcgcagccgg ctatctcctt cgcctgcgct ttgcattcat ccggcagagc
     8101 ggggagctgt tttcctaaca gaatcaactg acgatattta tcctcccatt gggtcagcgg
     8161 gagaaagata gcgcgtaacg tctcttccgt taccgttgtg ccgaacgggt gtccggtata
     8221 aagagggttt gtcattaatc caccagcagt tccagcgcgc ggtcaacggc gttaaccaac
     8281 gcatccacat catgttgggt attatacggc gcaaaagagg cgcgcagagt ccctgtgacg
     8341 ccaagttccg ctagcaatgg ctgggcgcaa tgttgcccgg cccggagcgc aataccgtat
     8401 tccgccagca gcgtcaccat atcgccgtgg tgcacgccga caaaatcaaa ggccagcagg
     8461 ctggagtcct ggcagcggaa cgaacgaaag cccggacgtt tcgccagtgc gtcttccgcc
     8521 agcgtcgcca gcccccggct ccagttttcg gcctgttcaa tatcgatatc ggacagccat
     8581 tccagcgcag cgctcaggcc gatgaccccg gcgacgttcg gcgtccccgc ttccagtttc
     8641 cagggagcgc tttgagtggt gaagccttca aagctaacgt cacggatcat cttgccgccg
     8701 ccgagccagg gcgacatcgc ctcaagaagc tccggcttac cgtacagcac gccgataccg
     8761 gtcgggccat acagtttgtg agcggaaaaa gcataaaaat cgatatcaag ctgctggaca
     8821 tccgccggga agtgtacagc gccttgcgcg ccatctatca tcacgaccat tcccgccgcg
     8881 tgagcggcgc tgatagcgcc tgtgagatcc ggacagccgc ccgttacgtt cgacatttgc
     8941 cccagcgcca gtatccggct gcgcgacgtg atcagttccg gcagacgctc aacatcagga
     9001 agacgtcggt cattaagcgg cagttttatg acctgcgcgc cggtttgttg cgccaccatc
     9061 agccagggaa caaggttggc gtgatgctcg gcgacgctaa cgataatttc atcgccgggg
     9121 cgcagacgag gacgggcgta acactgcgcc accatgttga tcgcttcggt ggtgccgcgt
     9181 gtccagacga tacttttttc atcgggcgcg tttaacagcc gcgccgcttt tgctctggcc
     9241 gcttcatatt gcgccgtcag gcgctgcgcc tgcgcaaact ggctacgatg aacgttaccg
     9301 gcgctcaaac aataaaactg gtgcgtggcg tcaatgactg cctgtggctt taatgccgtg
     9361 gcggcgctat cgagataaac acccgcatcg gctagcgcgg gaaactgcgc gcgaaactgc
     9421 gtgggattaa aagcgttcat gatattcctc ggttcagttt accgatcgtg gcgtaaaagc
     9481 gcggctgata caaggtttgt cctaaccatc ggaatcgtct gtatatcctg gcgaattatg
     9541 taaaggaggt tatgctgaat aatgttaggc gaatgtttaa gcctgttacg gagtccgctt
     9601 taaatagcac aaacagcttt aaggagaaga agatgaaaaa gactgccgca attatctctg
     9661 catgtatgct gacttttgcc ctgagcgcct gttccggtcc taattacgtt atgcacacca
     9721 atgatggacg tagcattgtg accgacggta aaccccagac cgataacgat accggtatga
     9781 tttcgtataa agacgctaat ggcaacaaac agcagatcaa tcgtactgac gtgaaagaga
     9841 tggtggctct ggaaaactaa ccgtttgtta tacaaaaaaa agcaccgcaa tatggcggtg
     9901 ctacattaat cactatggac agacagggta aatgtacagg aagtgaaaaa gggtagtctc
     9961 gctaccgtgg tctgaatcgc agaccaattg caaacacaac aacacaacat cacaaccgta
    10021 agccaaaagc ccatcagaac acgcattccg ataaaacttt tcgttccggc tcaggaagtg
    10081 ccgccactat aggtatttgc tggtagaacc tcaacggaca atttataatg tctcagatta
    10141 aaaaaactaa taggttacct attgttacct atttgttaaa ttcattcgac attaagtcca
    10201 gaggccatgt caaaacgatt acctccttta aatgcgttac gcgtttttga tgctgccgcg
    10261 cgccatttga gttttacgcg agcagcggaa gaactttttg tgacgcaggc cgcagtaagc
    10321 caccaaatta agtcacttga ggattttttg gggctaaaac tgttccgccg ccgcaatcgt
    10381 tcgctgctgc tgacggaaga aggccaaagc tattttcttg atattaaaga gatattttcc
    10441 cagctaacgg aagcaacgcg taagctccag gcgcgcagtg ccaaaggggc gctgacggtg
    10501 agtttaccgc ccagttttgc catccagtgg ctggtgccca ggctctccag ctttaactca
    10561 gcttatccgg gaattgacgt tcggatacaa gccgttgatc gtcaggaaga taaactggca
    10621 gacgatgtcg atgtcgcgat tttttatggc cggggaaact ggccgggctt gcgcgtcgaa
    10681 aaattatacg cagaatattt attgcccgtc tgttctcctt tattgctcac aggcgaaaaa
    10741 ccgttaaaaa cgccggagga tctggcgaaa catacgttat tgcacgatgc ctcccggcgt
    10801 gactggcagg cctatactcg tcagttaggg ctcaaccata ttaacgttca gcaagggccg
    10861 atatttagcc acagcgcgat ggtgctacag gcggctattc acggacaggg gatcgcgctg
    10921 gcgaataatg ttatggcgca gtcggaaatt gaagccgggc gactggtgtg tccatttaac
    10981 gatgttctgg tgagtaagaa tgctttttat ctggtttgtc atgacagcca ggcagaactg
    11041 ggtaaaatag ccgccttccg tcagtggatt ttggcgaagg cggcgacgga gcaagaaaaa
    11101 ttccgttttc gttacgaaca ataattaact tagggtatga ccatgaccag ccgttttatg
    11161 ctgattgtcg ccgctatcag cggttttatt tacgttgctc tgggcgcgtt cggggcgcat
    11221 gttttgagta aaaccctggg cgtggttgaa atgggctgga ttcagaccgg cctgcaatat
    11281 caggcgttcc atacgctggc gatctttggc ctggcggtgg cgatgcagcg ccgtatcagc
    11341 atctggtttt actggagcag cgtttttctg gcgctgggca cggtgctgtt tagcggcagc
    11401 ctgtactgcc ttgcgctttc gcatctgcgc ctgtgggcgt atatcacgcc tgtcggcggc
    11461 gtcagtttcc tggtgggctg ggcgctattg ctgattggcg ccattcgtat gaaacgtaag
    11521 ggcgcgagcc atgaataaag ttgtcttgct ctgccgtccg gggtttgaaa aagagtgcgc
    11581 tgcagaaatt accgataaag cgggaaaacg ggaaatattt ggttttgcac gcgtaaaaga
    11641 gaacgcaggc tatgtcattt atgaatgcta ccagccggaa gatggcgaaa agctgatttc
    11701 agaactgccg ttcagttcgc tgattttcgc ccgccagtgg tttgtggtgg gtgaactgct
    11761 gcaacattta ccgccggaag acagaatcac gccgattgtc ggcatgttgc agggcgtagt
    11821 ggaaaagggc ggcgagctgc gggttgaagt cgccgacacc aatgaaagta aagaactgat
    11881 gaagttctgc cgcaaattta cggtgccgct gcgcgcggct ttgcgtgatg cgggcgtatt
    11941 gacgaattat gaaacgccga agcgtccggt cgttcatgtc ttttttatcg cgccaggatg
    12001 ctgctatacc ggttattcgt tcgcgcataa caattcaccg ttttatatgg gcatcccgcg
    12061 tttgaagttt ccgtctgatg cgccgagccg ctcaacgctg aaactggaag aggcgctcca
    12121 cgttttcatc ccggaagatg agtgggatga acgtctggca aacggcatgt acgcggtgga
    12181 tttgggcgcc tgtcccggcg gatggacgta ccagttagtg aagcgcaata tgtgggtcta
    12241 ctccgtagat aacggcccga tggcgcaaag cctgatggac accggacagg tgacctggtt
    12301 gcgtgaggat ggcttcaggt accgtccgaa ccggaataat atttcatgga tggtctgcga
    12361 tatggtggag aagccggcca aagtcaccgc gttaatggcg cagtggctgg tgaacggctg
    12421 gtgtcgggag acgattttta accttaaact gccgatgaaa aaacgctatg aagaggtatc
    12481 gcataacctg gcgtatcttc aggcgcagtt ggatgagcat ggcgttaatg cgcagatcca
    12541 ggcgcgtcag ctttatcacg atcgcgaaga agtgacggta cacgtgcgtc ggttgtgggc
    12601 ggctgttggc ggacgtcgcg acgagcgata aaaacgcgct gccgtcatcc ggcgcgtcat
    12661 cagcgccgga tggcgcacgc ttatccggcc tatgactgcg gcgcatctga aacgatatgc
    12721 gtcacatcat ccagatggcc gatgcgcgcc tctcctgaac gattaaattt acttttatca
    12781 atcaataata aagactgcga ggcgcgcctg agcaggatag atttaaaatc ggcgttgatc
    12841 gcattggagt cccacagatc gccgccgccg tcgatcccct cgcaggaaaa gatgaacaga
    12901 tcgatatcaa gcgattttag ctgtgagata agcgacggat taacgtaaca gccatattta
    12961 cgttcaagct ggccgccgga acttatcagc gcaatgcgtt cgcgttttcc cagctcctga
    13021 cagataggat ggctattggt aaaaacctga atgggaatat ccggcaactg gcgggccaga
    13081 taccagcagg ttgaactggc atccagcgca atcgtcattc cttcttctat ccacgctaac
    13141 gcttcacggg caatatcggc tttatgcgca taatggcttt tcaggcggat atggaatgga
    13201 tcgccgctgt cctgattttc acgatgaata tatttagctc gtccgtgatt acgcagcact
    13261 tttccctgcg tctgtagttc actgagatcg cggcggatgg tctctttact gacgttaagc
    13321 cgggtggcca gcgcttcggt ggtcagactt ttatgattga tcagcagatc gactatcgct
    13381 tgttggcgtg ccgctttcat ttttctcacc ccatcattcg atgaacgccc gcgtcatgcg
    13441 ggcgcaccgg caagagatta cggcgttacc ccttttttta aaagaatatt tccgtacttc
    13501 gcgcactcac ctgtgataac gatcgcaaac gctttttgcg cccgctcata aaacgcatag
    13561 cggtcgatac gaacgatatc cgggcacggc gcttctaatg acaaagcatc gcgataacgc
    13621 gcttcaacgc tggggtcgag cgtgtcgcct tctacggcgg ccatcatcac cagcggcggg
    13681 gcgtagctat ccagctcaaa gagcggaatg attgcccgca gtagatcgct gacgctaaga
    13741 ccatcggcgc gaatcacctg cgggcccagg ctatgcgcgg gaaagtgagc gtcagaaaaa
    13801 atgatttcgt ccccgtggcc catctcggcc agcactttga gcagtgtcgg ggaaattaac
    13861 ggtgaaatgg tttttagcat ttcatactcc ctcaataatt tcaggttcgg tttgcggcca
    13921 gaaatagcga tactgataat tgacctgcgc acgcgcctgc tccgggctac taaattcgcc
    13981 tacgccgtac cagccaaaca tggcagcgcc ggccacggtg gtttccgcgt cgtccagcac
    14041 tttgataggg atatcaagtt gattcgcttt aatttgattc cacaaagcgt tgcgactgcc
    14101 gccgccaacc agtaacagtt ctgtggcgtt aaaatggccg attttctcca gcgtgcgcag
    14161 attacgctga agttgcgccg tcaggccttc cagcgcggcg cgatagaaat ggccgcgggt
    14221 ggtattgagc gtcacgccct gccagcctgc attttgacag gcgagcagat cgcactgcat
    14281 ccgcacgcct tccgcgccag cgggaatagc gcgcgcttcg tcgatcagcg tttgccatgg
    14341 cgtttccggc gtccacagca gttttcgtac ccattcgagt acgccggagg ccagccactg
    14401 cattccgggg ttataaagcc ccgactgact gtccagttca caggtcgagc ccggatactg
    14461 actgagcagc gaggtatcca cctgaccgct gcgcaccatc agaatctccc atgttccgga
    14521 ggagagcact ggttcacctt gctgcgcgcc agcgccgaat aacgcgaact gagtatcgtg
    14581 ttcggcagag atcactggca cacccgccgg gagaccgagt agcctggccg cgtctgtctg
    14641 tagcgtgcct atcggggcgc ccgcttccac gatacgcggg aacaggcggc gcgccaggcc
    14701 cgtcgcctgc aggatttccg gactaaagtc gcgctgatgg atatccagta gctggctggt
    14761 gcctgccata gtgatatcgg tcgtaaactc tccggtcaga cggtggttaa tcagcgacga
    14821 gataaacagc cagcagtgag cttgttccag caggcgcgga tgattctctt taagccagac
    14881 cagtttatac agcgtgttaa agctgaacgc gccgacgccg gagagcgtct gcaattgccg
    14941 gggcgagata aagcgctcaa tcgtttccat cacggcagcg gttcgcgggc atttccaact
    15001 gatgaccggg tagagcagct taccctgcgc atcgaccagc gcgccatcga cgccgaaagt
    15061 agtcaccgta ataccgcgaa caacacactc cgacagggcg ctggagagtg acctgcagca
    15121 gtcggcgaaa cgttgcagga tggcgtccag cgaccactga tgccaggcgc tattttctgc
    15181 ggcaatgtcg ctggcgttag cggttgaggc gcgggcgaca attttcccct ggcgatcaac
    15241 ggcgatcgcc cgaacgttag tcgcaccgca gtcgagaacc aggataacgt cttgtttcat
    15301 agataactcc ataaacgccg cctgatggcg ctacgcttat ccggcctacg gttcacgcgc
    15361 ccgtaggccc ggtaagcctg cgccaccggg ctaagccgca ttaacgttta tacagcgggc
    15421 cataattctg gcaggcgcga taatcctagc cttcgatatc cataccgtga gccgcccagg
    15481 cggaaggacg gtagatcttc gcctcctcca cgttgtgcat acataccggg atacgcagca
    15541 tcgcggcgag agtaataaag tccgccccta catgaccgat ggtgagtacg ccgtggttag
    15601 cgccccagtt cgccatcacc gaatagacat cggtaaacgg acctttgccg ataagacgcg
    15661 gcgcaaacca ggtggtaggc caggtagagt tggtgcgggc atcaagctga tcgtgcatcg
    15721 ctttcggcag ttcgacgctc cacccctcgg cgatttgcag tactggtccc aggcctttga
    15781 tgatattcac gcgggtcatg gtgaatggca cgccgccttc ggtcagaaaa cgggatgagt
    15841 agccgccgcc gcggaagtat tcgtgaattg ccgggcacca ttcagtggcc gccagacacg
    15901 catccgcctc ttgttggctg atttcccagt gcggtttcat ggtcggcttg ccttcgctgt
    15961 cgcgctgttt acaggcaccg tccagcgcgg cagaaccgga gttaatcagg tgaataatgc
    16021 cgtgttccgc cagggcgctg agcgcctggc cggtgacgcg ttctacggct tccggcgacc
    16081 agtaagttcg cacgtcggcg aatatctgcg cggtaccggt gagttgatgg ccaaacagca
    16141 tcgctactcc gttcagactg tcattttcgg tggcgacgac aaacggttcg cgtacgccgt
    16201 tccagtcaaa agagctattg agcagcgctt cggcggtatc gccgttcggg tattgatcgg
    16261 tccagtggcg ctggccctgg aagccggcgg caatggcgtt gtagcccagc gattcttcaa
    16321 ctaacccttt gtccgccagc gtcttgttgc cctgcatcat gtcgcgaata cacatcgcca
    16381 tcagcaggct ctcttttagc accgcgcggt tctgggcttc attgcgctta tactgcgagg
    16441 cgttttgatc ttcgccgtag cggaagtttt tatccgccca cgccagcgcc atctccagtt
    16501 cggcctcatc ataaattttt tgatcgatac ggcggcgcag ttcggtcata tctaccgctt
    16561 gcaccttcat gcccagccag gattcaaaga agttatgatc gacaatggaa cccgcgatcc
    16621 ccatcgacac gccgccgacg gagaggtagc ttttgccttt catgctggct accgctaacc
    16681 ctgcccgcgc aaaacgcagc agtttttctt cgacgtcggc aggaatggag gtatcgtcgg
    16741 catcctgcac gtcatggcca taaatggaga acgccggaat gcctttttgg ctgtgcgccg
    16801 ccagcgccgc ggcaaggtaa accgccccgg gacgctctgt gccgttaaag ccccagatgg
    16861 ctttcggacg catcgggtcc atatcaatgg tttcgctgcc atagcaccag cacggcgtaa
    16921 cggtaatggt cacgcccacg ttctggctac tgaatttttc ttcacaggcg gcggattccg
    16981 ccattccggc aatacaggta tccgcaatga cgcactccac ctgtgcccca caggcgtggc
    17041 ggattttctc ggtgatgagc gccgccgtcg ctttcgccat gttcatggtt tgctcttcga
    17101 gcgactcgcg tacgcccata cgacgtccat caatcaccgg gcggataccg attttcggta
    17161 agctgatttt tttcatgaca gattcctcac gttattcgga taaatgttca gtttgtcgcc
    17221 gcttgtgaac ggaaacgggc aaaaatgaag atgacggcaa agcacaatgc cggaaccagt
    17281 tcggcggtcg ggattttgcc tgcggcgtcg ctaacgaagc ccattactgg cgtgacaata
    17341 ccgccgccaa taatggtcat gacgataaaa gacgagccgt acttagtgtc ctgtcccaga
    17401 tttttgatac ccagcgagaa gatggttggg tactggattg acataaatgc gctacacaac
    17461 gtcagcgcca gcaggccgat atgtccgccg ctaaaggcgg aaatcagaca caggagcatg
    17521 gcaagcaggg cataggcggc cagcacttta tgcggcgcga agcggctgat aagccaggtc
    17581 ccggtgaaac ggccgataaa gaagcacacc atcgtgccgg tcaggtagtt ggcggcgaaa
    17641 ccgggcgtca ttccagggat ctcctcaatg gcgtagcgga tcagatagct ccagcaggcg
    17701 gtttgcgccc ccacgtagca gaactgcgcc agcaccgccc agcgccagtg gcggatacgg
    17761 atgagtcggg agagagaaga taagaaagag ctttgtttag catcgctatg atcgtcactt
    17821 tgcagggccg gaaatttggt cagcataatc agcagcgcaa ctactaatac gatggcgacg
    17881 ataatcatgt atggcgtttg taccgataac accaggctgt gtttataggc gctaagctga
    17941 tccggcgtca ttttatcaag cgcttcttgt gattgatgcg gcacgttaga caaaataagg
    18001 ctttgcccaa acacaacggc gataatagcg ccaaaggagt taaaagtttg cgccagatta
    18061 agccggaaat gtccgccgct ttctggacct aatgccgtca caaaaggatt ggccgcagtt
    18121 tcaaggcagc ctaaaccggc ggcgatgata aacaggccaa ttaaaaataa tgtgtaattc
    18181 attatctcgg cggcaggcca gaataatgcg gcgccaaaag catacaaaaa aagtccagtg
    18241 ataatccctg ctttataact gagttttttc atcaaaatcc cagcgggaat tggaatgacg
    18301 aaataaccga aataaaaggc tgactgaata agtccggcct ggaagttagt tagcgtaaaa
    18361 gcttgttgaa actgcggtaa taaaatgtca ttcagattat tggcgacggc ccacagaaaa
    18421 aatagcgagc aaagtaaggc gaatggaata atgtagcgct tgcttttgct ttgctctgca
    18481 tccacagcac gaaaactctg tgtttgtatt gttgtgtttc ccatagcatc ctcatcggtt
    18541 cagaagcttt tgcgtgcggt cggttctggt caccagaccg taaaattagg tgagttcgct
    18601 tttcttaccg gtaataaatt ggcgtccgga atgaactcat ggagtcattt tcaaataaaa
    18661 aaggcctttt aatatgatgg cggtcacatt tatacctgag agcatagcgt tctgtgatta
    18721 tcatcacttt aattttcata aaaaaatgac cgtttgagat gtttaattta aaaaaccaca
    18781 ggctgaatgc ccgaattaaa ttattgctac gaaaacggtc agtggtaact tatttttcat
    18841 ctttgcccgt tttgaaaaat attattaaga gcgggcattt atcggcgaga gaaatggcag
    18901 tcgtctggtt tatcgtggcg aattaattga tgtgtatcac aaaatattgt tatttaaatt
    18961 cccttctctt tattcagtat gatgatagtt gctaactatt cgattatttc aacaggacag
    19021 cagcgtgatg cgaaaggcgg ttttgttgtc tcattttgaa tcacagagag aggtaaataa
    19081 tggaacgaaa tagactggct cggcagatta ttgatacctg tctggaaatg acgcggttag
    19141 ggttaaatca ggggacggca ggtaacgtga gcgtacgtta tcagggcgga atgctgatta
    19201 cgccgacggg gatcccctac gagaagctga cagagtcgca cattgtcttt attgatgcag
    19261 acggtcagca tgagcagggc aagctgcctt ccagcgagtg gcgttttcat atggcggcat
    19321 accagacgcg ccctgacgcc aatgccgtgg tacataacca cgctgtccat tgtacggcag
    19381 tctcgatcct gaatcgcccg attccggcga ttcactacat gattgccgcc gcggggggga
    19441 actctattcc ctgcgcgccc tacgccactt ttggcacccg cgaactttct gaccatgttg
    19501 ccgtggcgct taaaaatcgt aaagcgacgc tgttacagca tcacgggctt atcgcttgtg
    19561 aagaaaattt agacaaagcg ttgtggctgg cgcatgaagt ggaagtgctg gcgcagctct
    19621 atttaagtac gctggccatt gtcgatccgg taccggtact ggatgacgag gcgatcgcta
    19681 tcgtactgga gaaatttaaa acttacggat tacgtattga agagtgatgt caggagacag
    19741 gcgatggcga acagaatgat tctgaatgaa acggcatggt ttggccgggg agcggtggac
    19801 gcattaaccg atgaggtgac gcgccgcggt tatcataagg cgctgattgt taccgataaa
    19861 acgctggtgc aatgcggtgt ggtcgataag gttacaagca gaatggatgc cgcagggctg
    19921 gcgtgggaga tctatgcggg cgtgatccct aatcctacga tttccgttgt ccaggaaggg
    19981 cttaaggtct ttacccaaag tggcgcggac tatctcatcg ccattggcgg cggttctccg
    20041 caggatacct gcaaagcggt cggtattatc agtaacaatc cggaatttgc cgatgtgcgc
    20101 agtctggaag ggctatcgcc gacccgtaaa cccagcgtgc cgattatggc gatcccgaca
    20161 acggcgggaa ccgcggcgga agtcactatc aattatgtga ttaccgatga agagaaacgg
    20221 cgcaaattcg tttgtgtcga tccgcatgat attccgcagg cggcatttat cgatgccgat
    20281 atgatggacg gtatgccgcc cgcgctgaaa gcggcaacgg gcgtggatgc gctaacccat
    20341 gctattgaag gctatattac ccgggccgca tgggcgctga cggatgcatt acatatcaaa
    20401 gccattgaga ttattgctgg cgcgctgcgc ggcgccgtag ccggagaaaa agaggccggt
    20461 gaggcgatgg cgctggggca atacgttgcc gggatggggt tttccaatgt ggggctggga
    20521 ctggtgcatg ggatggcgca tccgttgggc gcgttttaca acacgccgca cggcgtcgcg
    20581 aatgctattt tgctcccgca tgtgatgcgt ttcaatgccg ggtctaccaa cgagaaattc
    20641 cgtgatatcg cccgggcgat gggggtgaag gtagaaggat tgagccttga agaggcgcgt
    20701 aatgccgcag tggaagccgt atttacgcta aatcgcgatg tgggaattcc gctgcatttg
    20761 cgtgatgtcg gcgttcgaaa agaggatatc ccggcgctgg cgcaggcggc gttcgatgat
    20821 gtctgtacgg gcggcaatcc gcgtgaagcg agtctggcgg acattgtcga actgtatcat
    20881 accgcctggt aattttgccg gatggcgctg cgcttatccg ctctacattt cgtgcagttc
    20941 tgtaggccgg ataaggcgtt cacgccgcca tccggcaaca aaactaccgt accagccgta
    21001 gctgctgtaa gtttccgtcg atatgtaaat cggtttgcag acgtgcaata tcgcggcaaa
    21061 gaaatgccat ttctttatgc gtctcaagct ttttgcgcca cttttccggc acctcgtcca
    21121 gatgggcgta aattccctcc agattttgaa actgaaccaa cagctgggtc gcgcttttag
    21181 ggccgatacc ggcaacgccg gggactttcg aactactgat tcctgccaga ccccagtaat
    21241 ccggcaactg ccgggggagt acgccaaact ctttttcaat aaacggcgcg tccagccagc
    21301 gtttctggaa gtagtcgcga atgcgcaatc ccggagagag caactggcaa tagcctttat
    21361 cggttgacac aatggttgcc tggtgtccgg cttcggtaac ttttagcgcc agcgtcgccg
    21421 ccagatcgtc cgcttcgtta ccgtctgatg cccaacagcg tacgccgcgc tgttcaaacg
    21481 cggcgcgtag ggcgggcatt tcattatgta aatcgtcagg catcggcgga cgtcctgctt
    21541 tgtagtccgg caaacgctga tgacgccagc cgctgctgcg cgcgtcgtca tcaaataccg
    21601 ctacggcatg ggttggctgg ctgtggataa tcaattgatc gagcgcgtgt tggcaggttt
    21661 ccacacaggg cgatccctga acggcgtgaa tacggcgaat caaattgagc gcgtcgacga
    21721 taagcagatg agcagccacg gtgttctccc ttacaaacct gcgcgtaggg taacattcac
    21781 ggcgggggga ggcgagcatt gcgaaatcgc gctatccgta gacctgataa gcgaagcgcc
    21841 atcaggcaac aaaagccgga tggcggcgag cgccttatcc ggcctacaga tcctaaaatg
    21901 tgctgagaat taatcgcagg taacgatctt catcgccagg ccgccgcgcg aagtttcgcg
    21961 gtacttagcg ttcatgtctt taccggtttc gtacatggtc tcaatcactt tatcgaggca
    22021 tacgcgcggt tcgctggttc ggcgcagcgc catacgcgcg gcgttgaccg ctttgactga
    22081 agcaatcgcg ttacgctcaa tgcagggaac ctggacctga ccggcaaccg gatcgcaagt
    22141 tagccccaga ttatgctcca tggcgatttc tgcggcgata cacacctgcg ccggactacc
    22201 gcccagcagc tcggccagac ccgctgccgc catggaacag gccacgccga cctctccctg
    22261 acaacccact tcggcgccgg aaatagaggc gttcatctta tacagcgagc caatcgcgct
    22321 ggcgaccagc atatagcgag caagtgagtt agcatttact tcgcggataa atttgtcata
    22381 gtacgccagc accgccggca caataccaca tgcgccgtta gtcggggcag tgactactcg
    22441 tccgcctgcg gcattctctt cgttcaccgc cagcgcgaac atattgatcc agtcgacgac
    22501 cgccatcgga tcggtggtgg tcttatcctg actgaccagc atccgacgca gcgccgccgc
    22561 gcgacgcgga acgcgcagtt tgcccggcaa tacgccctcg gtggtgatac cgcgctcaat
    22621 accgctgcgc atcacctccc agaccttggc gaagtgctgc tccagcgctt ctttactgtg
    22681 cagagccagt tcgttttgca tcatcagacc ggagagcgac agacccgtct cctggcaatg
    22741 gcgctgtaaa tccgcggcgg ttttataagg atacggtacg ttaacgggtt cgctatttgt
    22801 caaaccaaag tgctcttcat cgacgataaa gccgccgcca atggagtagt aggtttggct
    22861 gtagagcact ttattgcccg ccagcgcggt aatacgcatc ccgttctcat gcagagacag
    22921 gttgtcggcg tggaaattca tgcacttatc gaccggaaat tcgacttcat gctgcccatt
    22981 ggccagtagt aaacgcccat gggtgttcac atcctggata aaggacggaa tggcgtcgat
    23041 atcgacggtg tccggcagat tccccgccag gcccataata atggcgatat cagtgtggtg
    23101 gcctttaccc gtcaatgaca gagagccgta gacatccacc acgacgcggg tgacatctgt
    23161 aagaatatgg cgggcaatca gatcgtccgt gaactgcttg cctgctttca ttggtccgac
    23221 ggtgtgagaa ctggaagggc caatgccgat tttaaaaata tcgaatacgc taatcatagg
    23281 gcatccattg cggttgtatc atagagaagc gccgcggtaa gcggcgctaa aggacttagc
    23341 tgaacagtga gtagaaaata gcggagatgg caatcaggcc cataatcaca acgaatacgt
    23401 tgctgatatg accgctgtac ttacgcattg ccggtacttt ctggatggca tacatcggca
    23461 tcaggaacag aatcatcgcg atgatcgggc cgcccagggt ttcaatcatg cccaggatgc
    23521 tggggttcag cgtcgccaca atccaggtgg tgaccagcat gaacagcgcg gtaattttat
    23581 tcagtttgtt gatttcgatg gatttacctt taccacgcag cgatttaatc accatcccgt
    23641 taaagccttc acgcgcgccc aggtagtggc cgaggaagga tttggtgata gcaatcatcg
    23701 caatgatcgg cgccatccag gcgatgatcg gcgcgttaaa gtggttcgcc aggtaagaca
    23761 gaatagagat gttctgctct tttgccgctg ccagatctgc cggcgtcagg ctcagcacgc
    23821 agctgaagac gaagaacatc acggtcagca ccatcatgat gtgggcgaag gccagaattt
    23881 tagaacattt cttctcagcg ccttcaccgt actcttcacg cttcgcaacc gcgaaggagg
    23941 agatgatcgg ggagtggttg aaagagaaaa ccatcaccgg aatcgccagc cacagcgtca
    24001 tccacagacc gttaccggta gacgcggcgg aatcaaagga cagagtttcc agcgccgcgc
    24061 cgttccactg cgggatcagg tacaaggcca gcagcatcag cgcagcgacg aacgggaata
    24121 ccaggatact catcgcctta acgatcattt gctcgccgaa gcgcacgatg gtcatcatgc
    24181 caacaatcag gatcagggaa agaatcgccc gcggcggcgg attaatcgct aactggtggg
    24241 tcaggaagct ttccacggta ttagtaatcg ccacgctgta aaccagcagg atggggtaaa
    24301 tcgcgaagaa gtagagcagg gtaatcagtt tacctgcgcc gataccgaag tgttcctcaa
    24361 cgacttcagt gatgtcttca cccgggtttt taccggacag cacgaagcgg gttaaaccac
    24421 ggtgtgcgaa aaaggtcatc gggaaagcga gaatcgccat gatgatgagc ggaatcatgc
    24481 cgccgacgcc tgcgttgatc ggcaggaaca gaacgcccgc gccgattgcc gtgccgtaaa
    24541 ggcccagcat ccacatggta tccgttttgc gccatgcgct tcgagagtca atcgaagcaa
    24601 tcgtgctggt ctgagtggtt ttcatctatt tctcctggag gatgctaaaa atcaggttgc
    24661 tggtctaatc caatgaaaaa agacctgatc gtaaaatgaa atctgcttag ggacgctttt
    24721 tatataattt ttcgccgtaa taattttcgg gcggaaagat acatttaagt gatgaatcta
    24781 tcagtgatcc cgatctcaaa tgcaataatc cgcttcttac atggataaat ttggaccatt
    24841 aatctattaa aaaaacgtca taacgaattt ccgggcgcga aggctaccat taacgatata
    24901 aggccggaaa gattggggcg caagatacgg aggtttgact ataaaaatca aggtttttag
    24961 tggattcttg cgaagaatga gagtttgaac cgataaatca cggtaagagg agtcaggtaa
    25021 acgtttgcct ggcaatctat ttatggtaaa ttataaatgg tgtttataaa acaatgcggg
    25081 ctatacctct gatgatcatc ataaaaaatg aaggcatacg tgaatcgcca taccgcaatg
    25141 aaaggaatgg gagaagcgcc cggctgctgg cggcaaccgg gcataagcgt taagcgcaga
    25201 tctcgtaaca ggggatgtag gcggaacccg gcaatttcat acgatgctgc gcgacgaatc
    25261 cctgcagcag atcgtccatg cgacgcatca tctctcgatc gccgtggatt ttatacggac
    25321 cattagcttc aatggcgcgt atcccgacct ccttcacgtt ccccgcgaca ataccggaga
    25381 aggcgcgccg cagatccgcc gccagaatct caaccggctg atccgggtac agtttcaggt
    25441 tggccatatt ctcatgcgac ggctcaaacg gcacctgcag atccggtgca atacgcatcg
    25501 accagttaaa actataggcg tcgccagtat cgcggcgatt ctctttcact tgcggcatcg
    25561 ctttcttcat cagccgcgct acctccgccg catcgtcaat gatgatgcgg taatgacggc
    25621 gggccgcttc gcccagcgta tgggtaataa actcatccag cacgcggaag taatcggcgc
    25681 tctcttttgg tccggtcagg atcagcggca gcacctgatt tttattggct ggattcatca
    25741 gaatccccag caaataaagc agctcttccg ccgtacccac gccgcccggg aagatgatga
    25801 taccgtgtgc gatacggacg aacgcttcca ggcgtttttc gatatccggc atgatgatca
    25861 gttcgttcac cagcgggtta ggcggttcag ccgcaataat ggaaggttca gtcatgccga
    25921 taaagcggct gtctttatag cgctgctgtg cgtgaccgac cgccgcgccc ttcatggggg
    25981 cttccatcgc cccagggccg cagccggtgc agatgttcag ctcgcgtaat cccaactgcg
    26041 tgccgacgcg acgggcatac aggtactcgt tttcgttaat tgagtggccg ccccagcata
    26101 ccaccatgtt tggcgcttcg ccgacgtgca gcgcccgggc gttgcgcaaa atggagaaca
    26161 ccagattggt gatatgtgtt gagctttcaa gatccagatg ctggaaacgg ccggcattgt
    26221 ggatctgccc attcacaaag agaatgtcgc gcagcactgc gaacaggtta gcctgtagcg
    26281 cacgaataat ccgcccgtca acaaaggcgt cttcaggcgg attaatcaat tccagcttca
    26341 cgccgcgctc gcggcgcagt acgttaatat cgaaattttc aaagcaggac agcagctctt
    26401 tgctgttgtc ggtcaggctg ccggagttaa gaacggcaag tgaacagtta cgaaacagtt
    26461 gatacaggtc gctactggcc gtgcgtttca gcatgtccac ttccagttgc gacaacatat
    26521 ccattgagcc aagcgggcta atatgtgtaa tcaagtaaac tccttatggg acgcaacacg
    26581 ccattccctg ttgattacaa tagccctggc tgatgacctt tcacaacctt acatgcgcaa
    26641 tccggcacgc aaaattgaca aaaaagatta ctgacgcgcc agcctgcccg tggcgggcac
    26701 aaaatcggta ttgctgcgcc agggattaat gtccagcccg ccgcggcggg tatagcgtgc
    26761 ataaacgctt aacgtttccg gctggcagaa gcgcagaatg tcattgaaaa tacgctctac
    26821 gcactgctcg tgaaattcat tatggtgacg gaaggagacc agataacgca gcagtttttc
    26881 cctgtcgatt ttgcgcccgc gatactgaat ttgtatcgag ccccagtccg gttggtgggt
    26941 gatcaggcag ttggatttca acagatgact gaccagcgtt tcttctactt gcttctcgcc
    27001 gctgaccgca tgttgcagat agtcggtagt aaactggtag ttgtcgatac tgatatcctg
    27061 atcgtcaata caggtgccgt ggaaatgggc gacaggctgt ccttccagct catcaagacg
    27121 atgaagcctc acgctaacgt tgccctgcgc gcaggcgcgc agatcgcgct ccagcgtctg
    27181 gcgcaccgtc tcccaggtgt caaagcgcgt ctggttaaag ctgttcagat acagtttaaa
    27241 acttttggat tcgattaaat taacgctggt gtaatccagt tcgacatgtc cgacggcgac
    27301 ctgcggaaga ccctggctgt taagccagga aagttcatac aacgtccaga tatccgcgcc
    27361 gtggaacggc aaattatcgg ctgttaatcc gagcgggtcg cgattcaaac tgcgcggtac
    27421 gccctgcagc aggctggcgt cataattgtc ccggtaatcc gttgattttc cgagagtcag
    27481 gccatcgaga gcctgatggt tttcataaga agacatgttt caccgtcata aaccagatac
    27541 actatgcgtc aagtgtatcc tggcttttat gaagagagaa actggtggac gaactgacag
    27601 cgcaggcatt gaaagccttt acgacgcgtt actgcgacgc gtggcaagaa aaacacggta
    27661 gctggccgtt gagcgaagaa ctgtatggcg taccttctcc gtgcattatt tcttcaaccc
    27721 gcgatgccgt ttactggcag ccgcagcctt ttgaaggcga agaaaatgta aacgcggttg
    27781 aacgcgcctt tgatattatg gtacaacctg cgctccacgc gttttacacc acgcagtttg
    27841 ctggcgacat gcccgcgcag tttgcggatg aaaagcttac gctactgcaa acctggagtc
    27901 aggatgactt tcggcgcgtg caggaaaatc tgataggcca cctggtcacg caaaagcggc
    27961 tcaagcttcc tcccacgctt tttattgcga cgcaggaaaa tgagcttgag gtcatttcgg
    28021 tctgtaatct gtccggcgag gtgattaaag aaacgctggg cacccgcaat cgtaccgttc
    28081 ttgccgcaac gcttgcggaa ttccttacgc aacttaatcc tcttctgtaa tcgtttgccc
    28141 taacgggtgt gagagatctc ttacaaagtc tgtaggagat cgccaggata tcagcggata
    28201 ctgagccccg ttttcttatg taagtctata taaaacaact aattaaaatg tttttgcgca
    28261 ctttcatatg aaaatttact taaggtattg tctgtaagcg tcttgtaaga caaggtgaaa
    28321 caggcgattc tatcttcgtc gacagggagt cgtacaacga agcgaacgtc aggatgatga
    28381 cgcttcagca ggacacgcca ggatggtgtt acaaggaaag gcttcaggat gaagcaaagt
    28441 ggaaagcgca ggatgcgtta aaggacacct ccaggacgga gaacgagagc cgatcaggat
    28501 attcggcgga tctggataac cagggacgct tcaggatgaa gctatcacat cgggcgatgt
    28561 gcgcaggatg taaacgttca ggatgaacag gccgtaaggt cacaggaaaa gttgtcacgg
    28621 atgagcaggg agcacgaaaa gtagctggaa tgctgcgaaa cgaaccggga gcactgttta
    28681 tacagtgctc cctttttttg ttattcttcg cgccagattt tcatcattga ggttttaaca
    28741 tgacgactca tgaccgtgtg cgtcagcagt tacatgcgct tgaaacgctg ctgcgcgagc
    28801 atcgccactg gcggctggat gcgccgcagg cgcatttgtt taccagcacc caaccatttt
    28861 ttatggatac catggaaccg ctggaatggc tgcaatgggt attgatccca cgtatgcata
    28921 ccctacttga taatgcgcag ccgctgcccg aggcgtttgc cgtcgcccct tattatgaaa
    28981 tggcgctggc ggcggatcat ccgcagcggg aggcgatcct ggcggttttg caggatctgg
    29041 atgcgctatt cgtccgcgat aaatcctgat gctggagatc ctctatcaag acccgtggct
    29101 ggttgccgtg aataaacccg caggctggct tgttcaccgg agctggctgg atcgcgacga
    29161 aaaagtcgtg gtcatgcaaa cggtgcgcga ccaaatcggc cagcatgttt ttaccgccca
    29221 ccgtctcgac aggcccacgt cgggcgtact gttaatgggg ctgtccagcg aagcgggacg
    29281 ccgtctggcg cagcagttcg agcagcacca catccgtaaa cgctaccatg ccattgtgcg
    29341 cggctggctg atagatgacg cggtactgga ttatccgctg gtggaagagc gcgataaaat
    29401 tgccgataaa ttcgcccgcg aagataaagc gccccagccg gctgtaacgc agtatcgcgg
    29461 gctggcgacg gtcgaaatgg cggtgccgac cgggcgttat cccaccacgc gttatggcct
    29521 ggttgagctg gaaccaaaaa cgggacgcaa gcaccagctt cgtcgtcatc tggcgcatct
    29581 gcgtcatcct atcatcggcg acagcaagca tggcgatttg cgacaaaacc gcagcgccgc
    29641 agagcatttt gcctgtcgtc gcctgatgct tcatgccagt cggcttgaac tgacgcaccc
    29701 cttcaccgga cagccgttga taattcaggc cgggttggat gaaacctgga tgcaggtgct
    29761 gacacagttt ggctggcgtg gacttctccc tgacaatgaa agggttgagt ttacggcggc
    29821 gtcccggcag gatgagactc atctgacata attcagggag atacgcataa tggcggaaat
    29881 tggtattttt gtcgggacca tgtatggcaa ctcactgctg gtggcggaag aagcggaagc
    29941 gatcctcgcc agacagggcc acagcgcgac cgtgtttgaa gatcctgaac tgtccgactg
    30001 gcagcaatat caggataagg ttgcgctggt cgttacctcg acgaccgggc aaggcgatct
    30061 accggatagc attgcgccgc tctttcacgg cattaaagat acgttgggtt ttcagccaaa
    30121 cctgcgttac ggggtgattg cgctaggtga tagcagctac cccaatttct gtaatggcgg
    30181 caaacagttt gatgccctgt tgcaagagca aagcgcgcag cgggtggggg agatattatt
    30241 cattgacgcc agcgaacatc cggagccgga gagccaatcc aatccctggg ttgaaaactg
    30301 gggaacttta ctttcctgag gtaaatccct cccccctacg ggagggtacc ttttcgtttg
    30361 cttgcgttgc cagtaagcaa aatcacgacc tgtacacagt gtaaagtaac tgaatcgtgt
    30421 tagctttggg catatgcccg caaaagcggc agttttttac gggcgttttc atgtaatcaa
    30481 gcgacctgtt tcacattctt ctctttttac tcctcctgcg tcgacgccga cgccttctga
    30541 tttcatttcc gtgaagtggc ttccactgtc ctgggctttt gccataaaca ggcgtaattc
    30601 atcgccaaaa tactgtgttg ttgcacggtg agtgtgtgtg gcgcgctttt tatacttctc
    30661 ctgccagtga ataaaagcat gcagcgtgca aagcaaacga cctaataaaa gctgcaacaa
    30721 ggaaacgtta tctctgattc cctaccggtt gtgcagttca gagtgagcgt agctaacgcg
    30781 aaatttcagg agtgcaacaa tgagttcatt aagtcacgcg gcgagcagtg cggagaaacg
    30841 cacgaacgcc cgctactgga tagtggtgat gctgtttatc gtcacatcct tcaactacgg
    30901 cgaccgcgcc acattgtcca ttgccggctc agaaatggcc aaagatatcg gccttgatcc
    30961 ggtaggtatg ggctatgttt tttctgcttt ttcatgggcc tatgttatcg ggcagatccc
    31021 gggcggctgg ctgctggacc gctttggttc caaacgcgtc tatttctggt ctattttcat
    31081 ttggtcagtc ttcaccctgt tgcagggttt tgtcgatatc tttagtggtt tcggcattat
    31141 tgtcgccctc tttacgcttc gtttcctggt cggtctggcg gaatcgcctt ctttcccggg
    31201 caacagtcgc atcgttgcgg cctggttccc ggcgcaggag aggggaacgg cggtggccat
    31261 ctttaactcc gcgcaatact ttgccacggt tattttcgcg ccgattatgg gctggctgac
    31321 gcacgaagtg ggctggtcgc atgtcttctt ctttatgggc gggttaggga tcatcatcag
    31381 ctttatctgg ttgaaagtta tccatgaacc aaataaccat ccgggcgtaa ataagaaaga
    31441 attggagtac atcgcagaag gcggcgcgct gatcaatatg gatcagaaag acaccaaagc
    31501 gaaagtaccg tttagcgtca aatggggcca gatcaaacag ctgctgggct ctcgtatgat
    31561 gattggcgtt tacatcggtc agtactgtat taacgcattg acctatttct ttattacctg
    31621 gttcccggtc tatttggtcc aggcgcgcgg catgtcgatt ctcaaagcgg gctttgtcgc
    31681 ctcggttcct gcagtctgcg gctttatcgg cggcgtgttg ggcggcatca tttccgactg
    31741 gctgatgcgt cgtactggct tcctgaatat cgcgcgcaag acgccgattg tgctgggaat
    31801 gttgctgtca atggttatgg tgttctgtaa ctatgtgaac gtggaatgga tgatcatcgg
    31861 ctttatggtg ttggccttct tcggtaaagg tattggcgcg ttgggctggg cagtaatggc
    31921 ggataccgcc ccgaaagaga tcagcggtct ttccggcggc ttgtttaata tgttcggcaa
    31981 tatttccggt attgtgacgc caatcgcgat tggttacatc gttggcacca ccggttcctt
    32041 caacggcgcg ttgatctatg tcggcgtaca tgccctggtg gccatcatca gctatctggt
    32101 gctggtaggc gatattaagc gtattgaact gaaacctgtc gcaggacaat tatcatgaca
    32161 acgcaatcca gtcccgttat tacggacatg aaggtcattc cggttgccgg acatgacagt
    32221 atgctactca acatcggcgg cgcgcataac gcgtacttca cccgtaacat cgtcgtcctc
    32281 accgataacg ccgggcatac tggcgtcggc gagacgccgg gcggagaagt gatttatcag
    32341 acgctggtcg atgctattcc gatggtatta ggccaggaag tcgcccgcct gaacaaagtg
    32401 gtgcagcagg tgcataaagg caaccaggcc gctgattttg acacctttgg caaaggcgca
    32461 tggacgtttg aactgcgggt taacgcggtg gcggctttgg aagcggcgct gcttgatcta
    32521 cagggacagg cgcttaatgt gccggtctgt gaactgttag ggccaggtaa acagcgcgat
    32581 gccgtcaccg tgttgggcta tctcttctat attggcgatc gcactaaaac cgatctgccg
    32641 tatctggaaa gcacgccggg cagtcatgaa tggtatcgtc tgcgccatca ggaagcgctg
    32701 aacagcgacg cggtcgtgcg gctggcggaa gcgtctcagg atcgctacgg ctttaaagat
    32761 tttaaactca agggcggcgt gctgccgggc gaacaagaga ttgataccgt tcgcgcgcta
    32821 aaaaaacgct tcccggacgc gcgtattacc gtggatccga acggcgcctg gctactggat
    32881 gaagccattg cgttgtgcaa agggctgaat gatgtactga cctacgcgga agatccgtgc
    32941 ggcgcggagc aaggattctc tggtcgtgaa gtcatggcgg agttccgccg cgcgacagga
    33001 ctgccggtgg cgaccaatat gattgccacc aactggcgtg aaatgggaca cgcggtgatg
    33061 ctcaacgcgg tagatattcc tcttgccgac ccgcatttct ggacccttac cggcgccgtt
    33121 cgcgtggcgc aactgtgcga tgactggggg ctaacctggg gctgccattc gaataaccat
    33181 tttgatattt cactggcgat gtttacccat gtcggcgcgg cggcgccagg caaacccacc
    33241 gctattgata cgcactggat ctggcaggag ggcgattgcc gcctgactaa aaatccgctg
    33301 gaaattaaaa acggcaaaat tgccgttccg gatgcgccag gactgggcgt agagcttgac
    33361 tgggaacagg tgcgaaaagc gcatgacgcg tataaaaagc tgccaggcgg cgcgcgtaat
    33421 gatgcaggcc cgatgcaata cctgatcccc ggctggactt ttgaccgcaa acgccctgtt
    33481 tttggtcgtc actaattctg aataaggaca cagttatgag tactcaattt accacgcctg
    33541 tagtgactga aatgcaggtt atcccggttg cgggtcatga cagtatgctg atgaacctga
    33601 gcggcgcgca cgccccgttc tttacgcgca acatcgtcat tgttaaagat aactccggtc
    33661 atactggggt cggcgagatt ccgggcggcg aaaaaattcg caaaacgctg gaagatgcga
    33721 ttccactggt ggtgggaaaa acgctggatg aatataaaaa tgtcctgacc gccgttcgca
    33781 accagtttgc cgatcgcgat gcgggcggac gcggtttaca aacgttcgat ctccgtacca
    33841 ctatccatgt ggtgacgggc attgaagcgg caatgcttga ccttttgggc caacatctgg
    33901 gcgtcaacgt cgcttcgctg ttaggcgacg gtcagcagcg cagcgaagtc gaaatgctgg
    33961 gttatctgtt ctttgtcggc aatcgcaagg ttacgccgct gccgtatcaa agccagccgg
    34021 atgagcaatg cgactggtat cgtctgcgcc atgaagaggc gatgacgccg gaaacggtag
    34081 tgcgtctggc ggaagcggcg tatgaaaaat acggcttcaa cgacttcaaa ctgaaaggcg
    34141 gcgtgctggc gggcgaagaa gaggccgagt caatcgtggc gctggcgaaa cgtttcccac
    34201 aagcgcgcgt cacgctcgat ccaaacggtg cctggtcgct gaacgaagcg atcagcattg
    34261 gtaaatacct aaaaggttct ctggcctatg cagaagatcc gtgcggcgcg gagcagggtt
    34321 tttccggtcg tgaagtgatg gcggaattcc gtcgcgcgac cggattaccg acggccacca
    34381 atatgatcgc caccgactgg cgtcagatgg ggcatacgct gtcgctgcaa tccgtcgata
    34441 tcccgctggc ggacccgcac ttctggacta tgcaaggctc tgtacgcgtg gcgcaaatgt
    34501 gtcatgagtt cggcctgact tggggctcgc actctaacaa ccactttgat atttcactgg
    34561 cgatgtttac ccatgttgcc gcggcggcgc cgggcaagat cactgctatc gatacccact
    34621 ggatctggca ggaaggcaac caacgtctga ctaaagaacc gtttgaaatt aaaggcggca
    34681 tggtgcaagt accgaccaaa ccggggctgg gcgttgagct cgatatggat caggtgatga
    34741 aagcgcatga gctctatcaa aagcatggct taggcgcgcg tgacgacgcg atgggaatgc
    34801 agtacttaat tcctggctgg acgtttgata ataagcgccc ttgcatggtg cgttaagtca
    34861 gagccggttc cgtaaggaac cggtccttct ctgggtgtat gcttaacagg atcaacatgc
    34921 gtaaggacga cttatgaaaa tagtgatcgc accagattcg tataaggaaa gtttgagtgc
    34981 tcttgaggta gcgaccgcca ttgaacaagg atttcgcgag atctggcctg acgcggatta
    35041 cctgaaatta ccgctggctg atggcggaga aggtactgtc gaagcgatgg ttgaagcgac
    35101 ggcgggtcga atcgtgcatg ttgaggtcac cgggccgttg gggcatcgcg tcaatgcgtt
    35161 ttatgggctt tccggcgatg cgcgttccgc gttcattgaa atgg
//
LOCUS       DAGWFR010000021        34493 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.021, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000021 DAGWFR010000000
VERSION     DAGWFR010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 34493)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34493)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34493
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.021"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..63
                     /locus_tag="MOX77_001196"
     CDS             <1..63
                     /locus_tag="MOX77_001196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463121.1"
                     /note="binds to single stranded DNA and PriA helcase
                     facilitate replication restart; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ssDNA-binding protein"
                     /protein_id="HCA3356789.1"
                     /translation="QSAPAPSNEPPMDFDDDIPF"
     gene            1116..1748
                     /gene="siiA"
                     /locus_tag="MOX77_001197"
     CDS             1116..1748
                     /gene="siiA"
                     /locus_tag="MOX77_001197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-4 type I secretion system auxiliary protein
                     SiiA"
                     /protein_id="HCA3356790.1"
                     /translation="MEDESNPWPSFVDTFSTVLCIFIFLMLVFALNNMIIMYDNSIKV
                     YKANIENKTKSTAQNSGANDNSNANEIVNKEVNTQDVSDGMTTMSGKEVGVYDIADGQ
                     KIDITSTKNELVITYHGRLRSFSEEDTHKIEAWLEDKTNSNLLIEMVIPQADISFSDS
                     LRLGYERGIILMKEIKKIYPDVVIDMSVNSAASSTTSKAIITTINKKVSE"
     gene            1745..3133
                     /locus_tag="MOX77_001198"
     CDS             1745..3133
                     /locus_tag="MOX77_001198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HCA3356791.1"
                     /translation="MKYINHYRYLFVCFFLAILPFFALSFPGIREYVFDNFMVSAIYN
                     GVIIAIYITGSLCALFTILKNISAKDILIAQDASRKNSILSNLNQVLFAGEPKQCDFN
                     LLMELDDNVSTARNQRLSFIMSCSNVSTLVGLLGTFAGLSITIGSIGNLLSSPSDVGG
                     DNASNTLNMIVTMVASLSEPLKGMNTAFVSSIYGVVCAILLTSQSVFVRSSYSLVSTE
                     IKKLKIISNRSNNKQRSLRVESETLVEFKELFKAFFDNYLTVENLRTQDEEKKRVMLS
                     DSFVTLQNRLLDNSAKLEQLSTLIDGYLVSNNENTKKLVDGVITITSRLSEGNTLLAD
                     NNARLEAMSTIQNIIDKKNDSIMASVDKCYQESFSHGKTINDIAAGSADISHTLDGLR
                     KEMDEDMNNVHLALSDLSATDKKIIANTKEISAEMVSYRDTYMPLMEKITSMHQEIVK
                     QRLLNKEEKNED"
     gene            3123..4430
                     /gene="siiC"
                     /locus_tag="MOX77_001199"
     CDS             3123..4430
                     /gene="siiC"
                     /locus_tag="MOX77_001199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-4 type I secretion system protein SiiC"
                     /protein_id="HCA3356792.1"
                     /translation="MKIKMFFLTTAFITQSTYASELPVIPLRDLVNAALTHQPSVAVS
                     YYETEKKNSDLDLSRAALYPTLDLTSGLNNNRKESSGTERNVENKVSLSYRITDFGVR
                     GANIRKSEYERDNSKTDYEKTKNIVSQEVVTTYYNISKYREMIDGVNLEKEFYKKMLE
                     TFSLLVSSGVAMQSDMRKVQVSIDALNTRSIMYQSMLDDEMYKMQNMTGLNLSPDQIQ
                     SDEKFNLFKKYIFVESPEKLMDMVMKYNDDYKMLVNTRKAATEDINAAKSSYFPTVDL
                     VSSYVQNNPSGSAKKSDYEDEFKTGINVSFNIFNGFRNAAQERKMVASYSQAKLQIDD
                     FLIKTRYNIDSQLSKYTAAKETYSVAERSHTNALQLTELYEQEFQLGQKSLLDLISSR
                     NEAFQAYVSMIDSKYSLYILKLQQLSLIFHLMDYLKSELNVMK"
     gene            4427..5704
                     /gene="siiD"
                     /locus_tag="MOX77_001200"
     CDS             4427..5704
                     /gene="siiD"
                     /locus_tag="MOX77_001200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-4 type I secretion system protein SiiD"
                     /protein_id="HCA3356793.1"
                     /translation="MNRRQSDHLMMIIISLTILIIILTYFIEINSVVHGQGVITTKDN
                     AQLISLSKGGTIQDIYVAEGDTVKKGELLAKVVNFDLQKEYQRYRTQKGYLDKDVNEI
                     SFILDKENESGLITLDGTRSLSNKEVKANIELVHSQIRAKELKKTSLDSEISGLQEKL
                     SSKEKELALLAEEINILSPLVKKGISPYTNFLNKKQAYIKVKSEINDIESSITLKKDD
                     IELVVNDIEALNNELRLSLSKIISKNLQELEVVNSTLKVIEKQINEEDIYSPVDGVIY
                     KINKSATTHGGVIQAADLLFEIKPKVRTMLADVKILPKYRDQIYVDEAVKLDVQSIIQ
                     PKIKSYNATIDNISPDSYEENTGGTIQRYYKVIIAFDVNEDDLRWLKPGMTVDASVIT
                     GKHSIMEYLLSPLMKGVDKAFSEPVNTKRLDTP"
     gene            5721..22400
                     /gene="siiE"
                     /locus_tag="MOX77_001201"
                     /pseudo
     CDS             5721..22400
                     /gene="siiE"
                     /locus_tag="MOX77_001201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463126.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="non-fimbrial adhesin SiiE"
     gene            22440..24506
                     /gene="siiF"
                     /locus_tag="MOX77_001202"
     CDS             22440..24506
                     /gene="siiF"
                     /locus_tag="MOX77_001202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-4 type I secretion system protein SiiF"
                     /protein_id="HCA3356794.1"
                     /translation="MDKKLEPYYLSAETALSIVSKKFNIKIDIKEDDINLRFKKYDRN
                     NTDDSIQMKNFFLSLGLSLQDILFNNGEDLLNEPMPILLLTPEMKWMVCVSGGQKIKL
                     VNARGELCYVEIEDEYLKELSAFSILPLNKVVDSIRVKNIIKNSLSMNKIFYTKYFFS
                     SLFMAIFALTIPVFSNLFYDKLVPSASVSSLFGVAIIVAVFIVFEFILRTSKDIYQSI
                     TARQDDVDIDIAFLEAVLYSKKKNGRSMSSAFVLWNEFQKIKPVLLNSIFQRIADIPI
                     FIIFLIVIYVNLGLVVIVPVTMFIVSIIIFLVNHHYTNELMNKQKEGQKNRNIFISEV
                     FLSIKMIHTLNNQGLLFDWVNTSNEQSYLNLKIRKLNLIYQSILGSMSSITQITIMVI
                     AFFMVIKGDVTTGAIVSSVIVSGRISGIISNFSSTLISILSAEKTGKDLLSFFDEDQA
                     EKTPALQSISKCNGDISIRGVSYQYDAQSPMIINRLSIDIPAGQRVAVIGECGAGKSS
                     LLGMLSGYLSPTDGAILYDGYNLGHLSQNFFSQHLSVVTTHDVLFTGTIESNFALKPQ
                     NDRGRVLKALHLANCGFILQHPMGLKFPVNFMAKNLSSGQQQQLLLARSLSSNASVFL
                     WDEPTSNLDENTEKQIFDNLDEFIHGKTLIMVTHRRYLIKYFDRVLVMKGGKIIRDCS
                     PDKLLM"
     gene            complement(24785..25066)
                     /locus_tag="MOX77_001203"
     CDS             complement(24785..25066)
                     /locus_tag="MOX77_001203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjcB family protein"
                     /protein_id="HCA3356795.1"
                     /translation="MAAITTGVVLLRWQLLSAVLMFLASTLNIRFRKSDYIGLAVISS
                     GLGVVSACWFATGLLGITMMDLAAIWHNIEAVMVETMSQTPPEWPMVLT"
     gene            25629..27230
                     /locus_tag="MOX77_001204"
     CDS             25629..27230
                     /locus_tag="MOX77_001204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HCA3356796.1"
                     /translation="MSQSTRRKVLRFLGTIIVVLLPVLLAIWFAHIRAVSETRNQLHS
                     FAQLVLDKTERVILQADLARDAAEQYQGQACTPAHQQRMLNIIRGRLYINELIYAKGQ
                     RFLCSTVMTPTSPYFIPRADYKRKPDIAIYYYRDTPFFNGYKMTYMQRGNYVAVINPL
                     SYSEVMSDDPALAWGMYDTVTNTFFSLSEQAQADQLLPLVQRSEPVFQQGERFYALVK
                     SAKRPVAAIVSTSKQRFYQNLFHQLTLTLPLGIICSIIVLFMWSRSRQAYYSPRRLLQ
                     RAITRHQLCLHYQPIIDIRNGTCVGAEALLRWPGYHGPVMSPCEFIPLAEKEGMIEQI
                     TDYVVEEVFNDLGGFLAAHPHLYVSINLSAADFLSSRLIVMIHEKTRQHSVLAQQIKV
                     EVTERGFIDVPKMTPIIQAFRQAGYEVAIDDFGTGYSNLHNLYSLNVDLLKIDKSFVD
                     TLTTNSASHLIVEHIIEMAQSLRLKIIAEGVETAEQVSWLLKRGVQYCQGWHFAKALP
                     PQEFIVWLQQTPAPLTIRGQTPYRR"
     gene            complement(27218..27541)
                     /gene="soxS"
                     /locus_tag="MOX77_001205"
     CDS             complement(27218..27541)
                     /gene="soxS"
                     /locus_tag="MOX77_001205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide response transcriptional regulator
                     SoxS"
                     /protein_id="HCA3356797.1"
                     /translation="MSHQQIIQTLIEWIDEHINQPLNIDVVAKKSGYSKWYLQRMFRT
                     VTHQTLGEYIRQRRLLLAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRREFDRTPSD
                     YRHRL"
     gene            27628..28086
                     /gene="soxR"
                     /locus_tag="MOX77_001206"
     CDS             27628..28086
                     /gene="soxR"
                     /locus_tag="MOX77_001206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-sensitive transcriptional activator SoxR"
                     /protein_id="HCA3356798.1"
                     /translation="MEKKSPRLKALLTPGEVAKRSGVAVSALHFYESKGLITSIRNSG
                     NQRRYKRDVLRYVAIIKIAQRIGIPLATIGDAFGILPEGHTLSAKEWKQLSSQWREEL
                     DRRIHTLVALRDELDGCIGCGCLSRSDCPLRNPGDRLGEHGTGARLLEDD"
     gene            28379..29047
                     /locus_tag="MOX77_001207"
     CDS             28379..29047
                     /locus_tag="MOX77_001207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase"
                     /protein_id="HCA3356799.1"
                     /translation="MLTVHHLNQSRSQRILWALEELALPYQIVRYQREKTMLAPPALK
                     KVHPLGKSPVIEDHGMVIAESGAILEYLQDTYDNIGRFKPADAQRKQHYRFWLHYAEG
                     SLMPLLLMRLLFTSLGKPPVPLGLRTLGGVIGKGAQKAYLNPQLETHARFIDGHLANH
                     PWFAGEQLSMADIQMSFPLFALLARGGIAHLDHINAWKARVEMRPAWQRAIQQGGPFT
                     IPGG"
     gene            29394..30743
                     /gene="ghxP"
                     /locus_tag="MOX77_001208"
                     /gene_synonym="yjcD"
     CDS             29394..30743
                     /gene="ghxP"
                     /locus_tag="MOX77_001208"
                     /gene_synonym="yjcD"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanine/hypoxanthine transporter GhxP"
                     /protein_id="HCA3356800.1"
                     /translation="MSTPSARTGGSLDAWFKISQRGSTVRQEVVAGLTTFLAMVYSVI
                     VVPGMLGKAGFPPAAVFVATCLVAGVGSIVMGLWANLPLAIGCAISLTAFTAFSLVLG
                     QHISVPVALGAVFLMGVLFTIISATGIRSWILRNLPQGVAHGTGIGIGLFLLLIAANG
                     VGLVIKNPLDGLPVALGDFDTFPVIMSLVGLAVILGLEKLKVPGGILLTIIGISIVGL
                     LFDPNVHFSGIFAMPSLSDENGNSLIGSLDIMGALNPVVLPSVLALVMTAVFDATGTI
                     RAVAGQANLLDRDGQIIDGGKALTTDSLSSVFSGLVGAAPAAVYIESAAGTAAGGKTG
                     LTAITVGVLFLLILFLSPLSYLVPVYATAPALMYVGLLMLSNVAKIDFADFVDAMAGL
                     VTAVFIVLTCNIVTGIMIGFATLVVGRLVSGEWRKLNIGTVVIAVALVAFYAGGWAI"
     gene            30893..32539
                     /locus_tag="MOX77_001209"
     CDS             30893..32539
                     /locus_tag="MOX77_001209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter"
                     /protein_id="HCA3356801.1"
                     /translation="MEIFFTILIMTLVVSLSGVFTRVLPFQLPLPLMQIAIGALLAWP
                     TFGLHVEFDPELFLVLFIPPLLFADGWKTPTREFLEHGREIFGLALALVLVTVVGIGF
                     LIYWLVPGIPLIPAFALAAVLSPTDAVALSGIVGEGRIPKKIMGILQGEALMNDASGL
                     VSLKFAVAVAMGTMVFTVGGATLEFFKVAIGGILAGFVVSWLYGRSLRFLSRWGGDEP
                     ATQIVLLFLLPFASYLIAEHIGVSGILAAVAAGMTITRSGVMRRAPLAMRLRANSTWA
                     MLEFVFNGMVFLLLGLQLPGILESSLAAAEADPNVETWMLFTDIVLIYAALMLVRFGW
                     LWTMKKFSLRFLKKKPMEFASWTSREILIASFAGVRGAITLAGVLSIPLLLPDGSGFP
                     ARYELVFLAAGVILFSLFVGVIMLPLLLQHLEVADHAQQLKEERIARAATAEVAIVAI
                     QKMEERLAADTEENIDNQLLTEVSSRVIGNLRRRADGRNDVESSIQEENLERRFRLAA
                     LRSERAELYHLRATREISNETLQKLLHDLDLMEALLIENQ"
     gene            complement(32634..33521)
                     /locus_tag="MOX77_001210"
     CDS             complement(32634..33521)
                     /locus_tag="MOX77_001210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCA3356802.1"
                     /translation="MDIRTLRYFVEVVRQQSFTRAAEKLFVTQPTISKMLKNLEDELN
                     CTLLIRDGRKLLLTDTGRVVFERGLAILAEFRQLEAELSDINHLNKGVLRLGIPPMVG
                     MLMAGPISLFRQRYPGVELKISEFGGLTVQQAVMNGELDVAMTALPVEEASGLTTLSL
                     FSHPLCVLVPRSGQWTTCDSIAPEALAEHPLLIYNEDFALSRQLMTLFSQHDVKPRIA
                     VRSGQWDFLAAMVQAGVGIAILPEPICQRLDKATLRWLPLESDLRWQLGMIWREGVYL
                     SHSARAWLTCCEGFWLKQP"
     gene            33625..34035
                     /locus_tag="MOX77_001211"
     CDS             33625..34035
                     /locus_tag="MOX77_001211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CidA/LrgA family protein"
                     /protein_id="HCA3356803.1"
                     /translation="MAVAISRVTPAVVQRLQVPVQVLLYAGLFIFSQYLVSWLHLPLP
                     ANLVGMVLMLALIVCRIIPLSWVRAGARWLLAEMLLFFVPAVVAVVNYAHLLLVDGWR
                     IFSVIAISTLMVLGATAWVVDKVYRYEMSRLNRE"
     gene            34028..>34493
                     /locus_tag="MOX77_001212"
     CDS             34028..>34493
                     /locus_tag="MOX77_001212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LrgB family protein"
                     /protein_id="HCA3356804.1"
                     /translation="MNNVQLSVLCLVITLGIYFANKRLYRRFRKLPLMPLVLTPALLV
                     LMLVFGHISWQNYISESHWLLWLLGPATIAFAVPVYDNLAIIKRHWMSLTAGVVTATV
                     VAVTSSVWLARLFTLSDEIQRSLAVRSVTTPFALAAAEPLGGQPDLVALFVVV"
BASE COUNT         9373 a         7386 c         8690 g         9044 t
ORIGIN      
        1 caatccgcgc cagcgccgtc taacgaaccg ccaatggatt ttgacgacga cattccgttc
       61 tgatttttgg taaaaaactc aaagcgttat ttgcattttc gctatagttc tcgtctgctg
      121 aaatgcctgg tgtaaaccag gcattttatt acctggtatt attgtcttag tatccctttc
      181 aaaaaagaga agcgcatatc tcacggaatg acttacggaa aaatgtcgct tatcgcctct
      241 ggccgactcg cctcggcaca tcattatcca gccgaagttc ataaatgtac tgcaataacc
      301 cggattgtct taaatatgaa agagaaatct catctgcaaa atatataatt tatagccatt
      361 ttttgacaac aaaaagatat tataaaataa cggtagagaa tggtcggtat tatcaatagt
      421 taattaaatg cttgctttag cttgtgatga gctcaaatat gatatgtgta tcttgcttta
      481 tttttaattg ctgaagataa aattgttact tatagctggc tttatataaa aaatggtttt
      541 atttgtgtat ttttttacac aattctgatt ttttactccc cacttattat attttcaatg
      601 atttaagtta tattgaagtc cctatgaccc tatgttttaa ttgtgaaaat tcattttatc
      661 ctctggaggc aaatttatta aatacgtatg gttataacgc gtattaaaaa gaaatatgtc
      721 cttaaaatga tttagagttt caatgattag ctaacaaatc tatttatcgg cgggtggttt
      781 taatttgctg atgactattt tttatttatg agctgagagc ttatgcgata cctattattg
      841 gggaagatat agttagtgca ataattgatg tctacctaat taaaaaaatg aagagtgttt
      901 ttaattaaag cactcatctt tgttgtgggc gcataaaaat ggcgtcgttg tttttatttt
      961 tctgattacg agatgtaaga aaactgaaat ctataaagcg tattggtagc aggaagccaa
     1021 gggtggtagc gttcactttc tgaataagtt gagcatcctt tatcctttct aatccacaaa
     1081 aacattttat tcacaatgta atatcaggag acaacatgga agacgaaagt aatccgtggc
     1141 ctagttttgt tgatacattc tctacggtat tgtgcatttt tatatttctt atgttggtgt
     1201 ttgcacttaa taatatgatt attatgtatg acaactcaat taaagtttat aaagcaaata
     1261 tagagaataa gactaaatct actgctcaaa atagcggagc caatgacaat tcaaatgcta
     1321 atgaaatagt taataaagaa gtgaatactc aagatgtgtc ggacggaatg actacaatgt
     1381 caggtaagga ggttggagta tacgatatcg ccgatggtca gaaaattgat ataacatcta
     1441 caaaaaatga gcttgttatt acgtatcatg gcaggctgag aagcttttct gaagaggata
     1501 ctcataaaat agaggcttgg ttagaagaca aaactaatag taatttattg atagaaatgg
     1561 ttattcctca ggcagacatc tctttctctg actctttacg actgggatat gaacggggaa
     1621 ttattttgat gaaagagatt aagaagatat atcctgatgt agttattgac atgagtgtta
     1681 actccgcagc atcaagtaca acgagtaaag ctattatcac gactattaat aaaaaggtgt
     1741 cagagtgaaa tatataaatc attatcgcta tttgtttgtc tgttttttcc ttgccatact
     1801 cccttttttc gctttatctt ttcccggtat aagagagtat gtttttgata attttatggt
     1861 ttctgcaatt tacaatggag tcattattgc catttatatt acaggttctt tgtgtgcatt
     1921 attcactatt cttaaaaata tttcagcaaa agacatatta atagctcagg acgccagtag
     1981 aaaaaatagc attctttcta acctcaatca ggttttgttt gccggggaac ccaaacagtg
     2041 tgatttcaat ttactgatgg aattagatga caatgtgtct accgcccgta accaacgatt
     2101 gtcatttatt atgagctgta gcaatgtgtc gacgcttgtt ggcctgttgg ggacgtttgc
     2161 gggtctgtct attacgattg gttcaatcgg gaacttattg agctcgccat cagatgttgg
     2221 cggtgataat gcaagtaata cactcaatat gattgtgaca atggtagcgt cgctttctga
     2281 accattgaaa gggatgaata ccgcatttgt atcttctatc tatggtgttg tttgcgccat
     2341 actcctgacc tcacaaagtg tttttgttcg cagctcctat tcccttgttt ctacagagat
     2401 caaaaaatta aaaatcataa gtaacagatc caataataaa caacgaagcc tgcgggttga
     2461 atcagagacg cttgtagaat ttaaagagtt gtttaaagcg ttttttgata actacctgac
     2521 agttgaaaac ttacggacgc aggatgaaga aaagaaacga gtgatgctat cagatagctt
     2581 tgtcactttg caaaaccgac tattggataa ctcagcaaaa ctggaacaac tttctacgct
     2641 gattgatggt tatctggtaa gcaataacga aaataccaaa aaattagttg acggtgtaat
     2701 aacaattacc tctcgtttat ctgaaggtaa taccctgctt gctgataata atgcacgact
     2761 ggaggcaatg agtacaatac aaaatattat agacaaaaag aatgattcaa taatggcatc
     2821 agttgataaa tgttatcagg aatctttttc acatggtaag accataaacg atattgccgc
     2881 tggcagtgcc gatatttctc atactctcga tgggctgaga aaagaaatgg atgaggatat
     2941 gaataatgtt catttagcgc tatccgatct atcggctact gataaaaaga ttattgccaa
     3001 tactaaagag attagtgctg aaatggttag ctatcgtgat acctatatgc cattaatgga
     3061 aaaaataaca tctatgcatc aggaaatagt aaagcaacgt ttgttaaaca aggaggaaaa
     3121 aaatgaagat taagatgttt tttctgacga ctgcttttat tacacaaagc acatacgcca
     3181 gcgagcttcc ggtcattcct ctaagagatt tagttaatgc cgcattaacg catcagccct
     3241 ctgttgctgt ttcatattat gagactgaaa agaaaaacag tgacttagat ctttcacggg
     3301 cagcacttta tcctaccctg gatctaacct ctggccttaa taataacaga aaggagtcgt
     3361 caggtaccga gagaaacgtt gaaaataagg tatctttatc ataccgaata acggattttg
     3421 gagtgagggg ggctaatatc aggaaatctg aatacgaaag agataatagt aaaactgact
     3481 atgaaaaaac aaagaatata gtgtctcagg aggttgtgac aacctattac aacatcagta
     3541 aatatcgtga aatgattgat ggcgtaaatc tggagaaaga gttttataaa aagatgctgg
     3601 aaactttttc gctactggta tcttccggtg tagctatgca atctgatatg cgtaaagtac
     3661 aagtatctat cgatgcatta aataccagaa gtattatgta tcagtcgatg ctggatgatg
     3721 aaatgtataa aatgcagaat atgactggtc tgaatttatc accagatcag attcaaagcg
     3781 atgaaaaatt caacctcttc aaaaaatata tctttgtcga aagccctgaa aaacttatgg
     3841 acatggtgat gaaatacaac gatgactata agatgcttgt caatacccga aaagctgcga
     3901 ccgaagatat taatgccgca aaatcatcct attttccgac tgtagatctc gtttccagct
     3961 atgtacagaa taatccgagc ggtagtgcca aaaaaagtga ttatgaagat gaatttaaaa
     4021 cgggtatcaa tgtcagtttc aacattttta atgggtttag aaatgcagcc caggaaagaa
     4081 aaatggtggc aagttactcg caggctaagc tgcaaattga cgatttcttg attaaaactc
     4141 gttataacat tgattcacaa ctttcaaaat acaccgctgc aaaagagact tactcagtgg
     4201 cggaacgttc acatacaaac gcgttacagc ttactgaatt atatgagcag gagtttcagt
     4261 tagggcaaaa aagtttgctt gatttaattt caagccgtaa tgaagcattt caggcatatg
     4321 taagcatgat cgacagcaaa tatagcctgt atattttaaa gctacagcaa ctctcattga
     4381 tttttcattt aatggattat ttaaaaagtg agttaaatgt aatgaaatga atagaagaca
     4441 aagcgatcat ctcatgatga taattatttc tttgacgatc ttaattatta tccttaccta
     4501 ctttatagaa attaattcag tggttcatgg tcagggtgtt atcactacta aagataatgc
     4561 tcagttaata tctctttcta aaggagggac gatacaagat atttatgtgg ccgaggggga
     4621 tactgtaaaa aaaggagaac tccttgcaaa ggtcgttaac tttgatctgc aaaaagaata
     4681 tcaaaggtat agaactcaaa aagggtatct ggataaagat gttaacgaaa tatctttcat
     4741 tcttgataaa gaaaatgaga gtggattgat taccctggat ggcacccgtt ctttaagcaa
     4801 caaagaggta aaagcgaata ttgaattagt gcatagtcag ataagagcta aagagttaaa
     4861 aaaaacctct cttgattctg agattagcgg attacaagag aagctaagtt cgaaagaaaa
     4921 agaactagca ttgcttgccg aagaaataaa tattctttct ccactggtaa aaaaaggaat
     4981 tagcccatat accaattttc ttaacaagaa acaggcgtat ataaaagtta agtctgaaat
     5041 taatgatatt gaaagtagca tcactttaaa aaaagatgat attgagctgg ttgttaatga
     5101 tattgaggcg cttaataatg aattgcgatt atctttatct aaaataatat ctaaaaatct
     5161 tcaggaactt gaggttgtta actctacatt aaaagtaata gagaagcaga taaatgagga
     5221 ggatatctat tcaccggttg acggtgtaat ttataaaatc aataaaagtg ccactactca
     5281 tggtggtgtg attcaggcgg cggacttact ttttgaaata aaaccaaaag taaggactat
     5341 gctggccgat gtgaaaatac taccaaaata ccgtgaccaa atatatgtag atgaagccgt
     5401 taagctagat gtccagtcaa ttattcaacc aaagataaaa tcgtataatg cgactatcga
     5461 taatattagc cctgactctt atgaggaaaa taccggagga acaattcagc gttattataa
     5521 agtaattatt gcattcgatg ttaatgaaga tgatttacgg tggttaaaac caggtatgac
     5581 tgttgacgcc agtgtaatta ccggaaaaca cagcattatg gaatacctgt tatctccttt
     5641 gatgaaaggc gtggacaaag ccttttcaga accagttaat actaaacgat tagatacacc
     5701 ttgagagtga atataatatt atgggaaata aaagcataca aaagtttttt gccgatcaaa
     5761 attctgtaat tgatttatct tctttgggta atgccaaagg cgcaaaagtt tctctttccg
     5821 ggccagacat gaacattacc acgccgcatg ggtcagtgat cattgtcaat ggcgctcttt
     5881 attcaagtat caaaggcaat aacctcgctg ttaaatttaa agataagact attaccggcg
     5941 ctaaaattct gggcagcgta gatttaaaag atattcaact ggagagaatt gacagctcat
     6001 tagttgattc tgctcaggta gaaaagaaag gtaatggcaa acgacgaaat aagaaggaag
     6061 aagaggaatt aaaaaagcag cttgacgagg ctgaaaacgc aaagaaagaa gctgataagg
     6121 cgaaggaaga agcagagaaa gctaaggagg cagcagaaaa aacgctcaat gaagcgtttg
     6181 aagtacagaa ctcgtcaaag caaattgaag aaatgctgca gaactttttg gctgacaatg
     6241 tagcaaaaga caatctggct cagcaaagcg atgcttccca gcaaaataca caggctaaag
     6301 caacgcaggc ttctaaacag aacgatgctg aaaaagttct tcctcaacct attaataaaa
     6361 ataccagtac tggcaaaagt aatagcagta aaaatgagga aaataagctc gatgccgagt
     6421 ctgttaaaga gccgcttaaa gtcacattag cgcttgcggc cgagagtaac agcggtagca
     6481 aagatgatag tataactaat tttaccaaac ctcagtttgt aggtagcact gctcccaatg
     6541 ccacggttat tattaaaatt aatggtattg ctgtcggtca ggctgtagcg gatagtttgg
     6601 gtaacttcac cttcacagcg cctgaaacat tgactgatgg aacatacaat ctggaggcag
     6661 aggccaagac tgctgatgga agcggtagcg ccaaacttgt cattactatc gattccgtta
     6721 ccgataagcc aacatttgaa ctttcgcctg aaagtagtgt gtccggtcat aagggcttaa
     6781 cgccgacctt gacgccttca attgttggta cggcggaaga gaatgctaag gttgacattt
     6841 atgtagataa taaactggtt gccagcgttg atgtcgataa agatggaaac tggagttatg
     6901 aatttaaaga taatgaatta tctgagggcg aaaatagtat aaaagtcgtt gccgtggata
     6961 aagcaggtaa taaaaacgaa acgacggata gtatcataac cgacaccatt cctccggaaa
     7021 agccgacgat tgagctggat gatagtagtg attccggcat taaaaatgac aacattacaa
     7081 atagcactct gccaacattt attggtgtgg cggaacctgg ttctacagtc tctatttatc
     7141 ttgggcttaa acatcttggt gaggtcattg ttgctaaaga tgggacatgg agctatacgc
     7201 ttactacgcc gctcaaggat ggcgaataca atataacagc aaccgctact gatattgccg
     7261 ggcatacctc tgcgacggca aatctgcctt ttactattga tacccgtatc agctatttca
     7321 gcgctgagat tgaaacgact gatgatagcg gtattgttgg agataacgtt actaacaata
     7381 ctcgcccaac ctttacaggt aaaactgagc caaatgctat tatcagtgtc ataaatagtg
     7441 agactggcga agaggttatt tttaaagcga atgacaaggg cgaatggacg ttcaatttca
     7501 cttcagactc agtggaaggg gttaacaatc ttacgttcac tgttgaagat gtcgctggca
     7561 acaaaaagga tttttccttt agttacgtta tcgatactgt tgcccctgta cctccgacgg
     7621 tttctttgga ggattttgtt gttttaccga atggtataat tttatcaggg aatgatttac
     7681 cggctttagt cggtacggca gagccaaagt ctaccatctt attgatgcga gatggtaaat
     7741 tatatgacag cattgaggtt gactcaaacg ggacctggaa ttatcagttt agtaataaat
     7801 ttcttcaggg cgcctatgat attgaaatca tttctcagga tgccgccggt aataaatcct
     7861 ctactgttaa atattctttt actattcaaa ctgaagttgt acctccaaaa gcggaactcg
     7921 atgccagtga tgattccggt gcaaaaggcg actggattac caataaacat aatgctctga
     7981 cattactggg aacagcggat aggtttgcta ccataaatat ccttatcgat ggtaaaacga
     8041 taggcgtgac gactgcggat gcagacggta actggaattt tgatatttcc cgaaatctgt
     8101 ctgacaatgt ttataagatt acggttgaat ctatcgatcc tttaggaaga acgtcatctg
     8161 tagattatca gcttaccatt gatagcttta cgccgatccc tactgttatg ttgcatgata
     8221 gcgctggctc tggcgttaaa ggcgatatga ttactaaaat taatacgccg ttgtttaccg
     8281 ggatggctga agctaatgct aaggtttcca tctatgttga cggtgtgtta agtggcgagg
     8341 ctattgctgg cgatgatggt gtatggaatt ttcaatttac cacagcgttg tccgatggct
     8401 cgcatgacgt aacggtaaag gtagaagata ttgccggtaa tactgcctcc tcatcagcgt
     8461 ataatttcca aatcgtaacg caaacgcaaa aaccaacaat agagttggtc aacgatacgg
     8521 gggttgataa tacagaccat attattaatg aaaagaatcc tgcactgaca gggaccgctg
     8581 caccctattc aacggttaaa ctctatgttg atggcgcact aatcgctgag gtcagaacaa
     8641 ataaagatag cagatgggag tataccctga aagccgatca aggtttggtt gatggcgatc
     8701 atagaataac cgcttcagtt gaagatatcg ctggcaacat tgcgcattcg gatcctttct
     8761 taattagcgt tgatactgct atttcaatac cgatagtttc attgagcccg gattcagatt
     8821 cgggaatcgc agatgataat ttaacgaata tcgttaaccc taccttgcac ctaaaagata
     8881 ttgatccgga cattatcagc gttcaggtat gggatgccgc gtctgatacg cagatcggtg
     8941 ttgccacgca acaacctgat ggttcatgga cctatacctt tacttcagat ttaacggaag
     9001 gcttgcatca ggtttatgtc aaggttgagg acattgcggg taataaagcg aacagcgcgg
     9061 tattcgattt tactatcgat accacagtat caacgccggt gatttccctg ctttctaagg
     9121 atgatacggg ggtgacaggc gataacctga ccaatatcaa taagccaggt tttgctattt
     9181 ccggtgttga tgccgatgcg catcgggtcg tcgtacaggt gatgcacaat ggcgtgagcg
     9241 aagagatcga actttcccac ctcaatggta gttggttatt tacaccaggg aatacgtggg
     9301 cggatggcag ctacacgtta acggtgaaag tagaagataa ggcaggaaat accagctatt
     9361 cagcgccgct gacggtcgtt atcgataccc aaatcgccat tgatggggtg gaactggtca
     9421 acgatagcgg cgtgaaaggc gacaatatga ccaacgacga ccgtccccac tttcgtgtga
     9481 cggtacctac ggatgtcaat gaagtccgtc tgagcattga cggtggtaat tcgtgggttc
     9541 aggcaacccc gggcgtggca ggaagctggg agtatatctg gccgacagac ctggcagatg
     9601 gtcaatacac gctaacggtg gaagcgactg ataaagcagg caatacagtg acgaagacca
     9661 tcgatttcgc ggtggatacc acgctgtcag tgccggtcat cgtactgaat agcgcggacg
     9721 ataccggtgt ccagggcgat aacatgacga atcgcaccca gccgacattt gccctgcagc
     9781 atattgatga tgatgccgtt cgcgttacgg tcagcgtgga gcatggcggc gtcaccacca
     9841 catttgacgc cacgaaaggc acaggcggat ggacctttac gccgccgaca tcatgggcgg
     9901 atggtgatta taccctgagt gtgtcagtcg aagataaagc ggggaacacc agccattctg
     9961 catcgctgac ggtgacggtg gacacgcaaa tcgccattaa taacattgaa ctggtcaatg
    10021 acagcggtat tcccaacgat aatctgacta ataatgtgcg tccacacttc caggtgacgg
    10081 taccgacgga tgtcaacgtg gtgcgcctga gcattgacgg cggcaagacg tggttcaacg
    10141 cgacccagag cgcgacgccg ggcgtctggg attatatctg gccggatgat gtggccgacg
    10201 gaggctatac cctgacggta gaagcgaccg atgaggcggg aaataaggca acacagacgc
    10261 tcgatttcac catcgatacc actctgtctg tgccgaccct ctcgctggac agcgcagatg
    10321 acagcggcat cgcgggcgat aatatcacca gtgttaaaac gccgggcttt accctcaaca
    10381 atattgatac cgatgtcagc cgggtgatag tggaggtaat gcacaatggc attaaacagg
    10441 aggtaccact ggttcagacc ggcggacagt ggcgctttgc gccgaccagc gactgggcgg
    10501 acggcggcta tatcctgacg gtgaaggtag aagacagggc cggaaatgtg aagcagtccg
    10561 cgccgttgac ggtgacagtg gacacgcata tcgccattga ccgtattgaa ctggttaacg
    10621 acagcagtat ccccgacgat aatctgacca atgaagcgcg cccgcacttt caggtgacag
    10681 taccggcgga tgttaacggt gtaagactga gcattgatgg cggcaaaacg tggtttgacg
    10741 ccacgcagag cgcgacgtcg ggcgtctggg attatacctg gctgacgaat gtggctaacg
    10801 gccctcacac cctgatggtg gaagcgaccg acaaggcggg aaacaaaacg acgcagaaac
    10861 tggacttcat catcgatacc ctgctgtcag aaccgactat taccctggac agtgcggatg
    10921 acagcgccgc tggcgataac atcaccaacg ttaagatgcc aggctttacc ctcggtaata
    10981 tcgacgccga cgtgaccaaa gtggtggtga cggtggcgca tgatggtaag aaccaacaga
    11041 tagagttgat taagaacggc ggtgtgtggc gctttacgcc gggcgcagcc tggaccgatg
    11101 gcgactatac gctgacggta aaggtagaag ataaggcggg taatacaaat tattctgcgc
    11161 cgctgacggt gactatcgat acgcaaacgt ctattgatcg cattgggctt cttaatgaca
    11221 cgggtattgt cggggataac ctgaccaatg aagcacgtcc acagtttcat attacggtac
    11281 cgacggacgt gaactctgtg caactgagtc ttgatggcgg catcaactgg gttaacgcaa
    11341 cgctgacgtc tgacggcgtt tgggagtata tatggccgac agatctggtc gaaaatacgt
    11401 ataccctgac agtgaaagca accgatgttg caggcaacac ggcgacggaa acgctcaatt
    11461 ttatcattga taccacattg tcgacaccga ccatcacgct ggatagcgca gatgatagcg
    11521 gcaccgccaa cgataataag actaacgtta aaacgccggg ttttattatc ggcggtattg
    11581 attctgacgt gactcaggtc gtcgtgcagg tgatgcgcga tggtcacagc gaggaggtgg
    11641 agctgacgca gactaacggg cagtggcgtt ttgtacccgg cagcgcgtgg actgatggcg
    11701 actatacgct gacggtaacg gtgaaagatg aggcgggtaa tattcgccac tcagcgccgt
    11761 tgacggtcac catcgatacg caaatcacca ttgaccatat tgaactggtc aatgacagcg
    11821 gtattcccga cgataatctg actaataatg tgcgtccgca cttccaggtg acggtaccga
    11881 cggatgtcaa cgtggtgcgc ctgagcattg acggcggcaa gacgtggttc aacgcgaccc
    11941 agagcgcgac gccgggcgtc tgggattata cctggctggc tgatgtggga gagggtaagc
    12001 ataccctgac agtggaggcg accgacaagg cgggaaacaa aacgacgcag caactggact
    12061 tcatcatcga taccctactg tcagaaccga ctatcgtgct ggacagcacg gacgacagcg
    12121 gaacaaaagg cgataacctg accaacgtaa ataagccgac gtttttactg ggcaatattg
    12181 acgcagacgc gcggtatgtc acagttgagg tacagcatgg cggcacgaaa gaggtgctga
    12241 cggccaccaa agacgcgacc ggcaactgga gcgtgacacc gatcggcaca tgggcagatg
    12301 gcgactatac gctgacagtg agggtggaag atgaggcggg gaacgaaaaa cactcagcgt
    12361 cgctgacggt cactgttgat acccaaatca ccattgatgt tattgaactg gttaatgata
    12421 acggtattcc cggcgacaat atgactaacg acgcccatcc gcagttccgc gtgacggtac
    12481 cgggggatgt taacgaagtc agtctgagca ttgacggcgg tgtaacctgg gttaaagcga
    12541 tgcaaagcgc gacgccgggc gtctggaatt atacctggcc aaagacagtg gcagatggtg
    12601 actacacgtt aacggtgaaa gcgactgata acgcaggcaa tacggtgacc aggacgctcg
    12661 acttcactat tgatactacg ttgtcgacgc cggttatcgt actggatagc gcggacgaca
    12721 gtggtgtcca tggcgataac atgaccaatc gcacccagcc gacatttgcc ctgcagcata
    12781 ttgatgatga tgccgttcgc gttacggtca gcgtagagca tggcggcgtc accaccacat
    12841 ttgacgccac gaaagacgca ggcggatgga cctttacgcc gacaggggcg tgggcggatg
    12901 gtgattatac cctgagtgtg tcagtcgaag ataaagcggg gaacaccagc cattctgcat
    12961 cgctgacggt gacggtggac acgcaaatcg ccattaataa cattgaactg gtcaatgaca
    13021 gcggtattcc caacgataat ctgactaata atgtgcgtcc acacttccag gtgacggtac
    13081 cgacggatgt caacgtggtg cgcctgagca ttgacggcgg caagacgtgg ttcaacgcga
    13141 cccagagcgc gacgccgggt gtctgggatt atacctggct ggctgatgtg ggagagggga
    13201 agcataccct gacagtggag gcgaccgaca aggcgggaaa caaaacgacg cagcaactgg
    13261 acttcatcat cgatacccta ctgtcagaac cgactatcgt gctggacaac acggacgaca
    13321 gcggaacaaa aggcgataac ctgaccaacg taaataagcc gacgttttta ctgggcaata
    13381 ttgacgcaga cgcgcggtat gtcacggttg aggtgcagca tggcggcacg aaagaagtgc
    13441 tgacggccac caaaggcgcg accggcatct ggagcgtgac accgaccggc acatgggcag
    13501 atggcgacta tacgctgacg gtgagggtgg aggatgatgc ggggaacgta aaatactcag
    13561 cgccgctgac ggtcacggtt gatacccaaa tcaccatcga tgttattgaa ctggttaatg
    13621 ataacggtat tcccggcgac aacctgacca atgacgttcg tccacacttc cgcgtcacgg
    13681 tgccagggga tgtcaacgag gtacgtctga gtatcgacgg cggtaatacg tgggttcgtg
    13741 caacacaggg cacggcaggg atctgggatt acacctggcc gaaagatgtg accgacgggc
    13801 tacataccct gacggtagaa gcgaccgata aggcgggaaa taagacgacg cagacgctcg
    13861 attttaccat tgatacccgg ctgtcaacgc ctaccatcgc tatggacagc agggacgata
    13921 caggtgccat tggcgatcat attacgagcg tcaaaagacc gggctttacc attggcaata
    13981 ttgacgccga tgcgcactcg gtcattttgc ggatcacaca gggcggcaat agccaggaag
    14041 tgacactaac ccaggttgga ggacagtggc gctttacgcc agatgctgac tgggcggacg
    14101 gtagctatac gctgacggta gaggtaacgg ataacgcagg aaacgttcgt cagtccacgc
    14161 cgctggtggt gacggtggac acgcaaacca gcattactga tattacattg gtcaatgatc
    14221 atggcgtgcc tgatgacaat ctaactaata gcacccgtcc gcagtttgag atcacggtgc
    14281 cggcggatgt gaattctgtg caactgagca ttgatggggg cgcaaactgg gtgagcgcga
    14341 cgcagggtat cgaaggcgtc tggggctata cctggccaac ggatatgggc gatggaaaac
    14401 acaccctaac cgtcatggtc accgacagag cgggcaatac ggcgacgcaa acgcttgaat
    14461 ttttcatcga cacccggttg tcgacgccga ccattgcgct ggatagcacg gatgataccg
    14521 gtacgcctgg cgatgatatg accaatcgca cccggccgac ttttattctg cagaatatcg
    14581 attcggatgt tatcaacgtt acagtcagcg tcacgcataa tggaacgaca acctcgttta
    14641 ccgcgacaca gggggctgga ggatggagct ttacaccgcc agcgccgtgg ggcgacggtg
    14701 attatacgct gacggtgaca gtggaggatc gggcgggaaa tacgcgtccg tctacgccgc
    14761 tgacggtgac agtggatacg caaatagcca ttgatcatat tgaattagtc aacgatagcg
    14821 gcgtccctgg cgataatgtg acaaaacatg tgcgtccgca gttccagatc tcggtaccgg
    14881 atgatgtgga aaaggttctt ctgagtattg acggcggcac gacctgggtt actgcaatca
    14941 agagttcgac ggttggcatt tgggattaca cctggccgac ggatatgcca gagggacagc
    15001 ataccctgat cgtggaagtg actgacggtg cgggtaataa gatgacgggg acgctcgatt
    15061 tcactatcga catcacgttg ttgacgccaa ccattgagct agcgcccgat caggataccg
    15121 gacagaataa gaacgataat ctgaccagcg tcactcagcc ggtatttgtg ttggggagta
    15181 tcgataaaga tgttcgacac gtggaattga gtattgagca taacggcacg tttaaaacgg
    15241 tggtactcac cgaatcagcc gacggctggc gctatcgacc ggattctgct ttggcggacg
    15301 gtagctacac attcaccgtg acggtaacag atgtggccgg taatcagcaa acatccgcgc
    15361 ctttaaaggt gacgatagac ggtacgttga ctacgccggt gattgagctg gcggccggcg
    15421 aagatagcgg tactgttggc gatcgcctca ccaatcacga tcggcctgtg ttcgacatac
    15481 gccagattga ttctgacgtt acgcgcgtga tggtcaaagt aacttacaac ggtaaaacgc
    15541 acgaggaagc ggcggtattc accaatggtt aatggcgctt tacgccttct gcgagctggg
    15601 ctgatggctc atatcagtta gccgttgtgg tggaagatct ggcggggaat gtaaaagaat
    15661 ctgcgccgtt agaggtacgt attgatacca cgacaaccat taacaatatc gtattgctta
    15721 atgatactgg cgtgcagaat gatcaattaa cgaatgttgc caaaccgtca ttcagaattg
    15781 acgttcccgg tgatgtcgtc caggtacgcg taaccctgga tggtggcgct aactggaatg
    15841 tgatacgcaa aaatgccgac ggacagtgga tttttgacag cccgaatact ctggttgacg
    15901 gcacatatac ccttcgcgta gaggccacgg atgaggcagg taatattgca aataaagatt
    15961 tagtatttaa tatcgatact aatatacagg ttccgactat tgctttagac gcaggacaag
    16021 ataccggagc gaatacagcc gataatatta ctaatatttc acgacccacc tttacgattg
    16081 gtaatgttga ccccgatgtt atcaaagtcg tggtgacgat tgatggtcat gattataacg
    16141 cgactaaggt tggggctggt tggcaattta caccaggcaa tgccattccg gatggttctt
    16201 ataatattac cgttacggtt gaagataagg ccggaaatac cgcgacatcg aaaccattac
    16261 ctgttgtgat agatacgacg gctgaaattg aaagcgtcac gttggttaca gatagcggtg
    16321 atagcgatgt agataacatt accaaagtcg acaagccgca gtttagtatt gttaccgctg
    16381 atgatattac ccatgtgcgc gttaaaatcg ataacgccgc taattggatt gaactcacaa
    16441 aaggagggga tggtcgctgg atatttaatg tcggttcggc attacctgat gggcaacaca
    16501 ctctcttggt tgatgtgact gatatcgccg gcaacgttgc gcaagaaacg ctgcagttta
    16561 cgattgatac gactctgcga gagccgacaa ttgtactcga tcccacccat gatactggtg
    16621 atgatactaa tgataatctt accaggatta acaaaccggt gtttattatc ggtaatgtcg
    16681 ataatgatgt atcacacatt gtggttcatc ttgatggtcg ggattacacc attgaaaaca
    16741 aaggggggaa tttaaccttt acgccggatc aaccgctgtc tgacggtcag catacgatct
    16801 ctgttaccgt aacggatatt gctggtaata ccaaaacatc ggccgaactg cagattgaaa
    16861 tcgacacgca ggttcagatt gacagtgtta cgttaacaac agatagcggc gtcaacgatc
    16921 acgataatgt caccaatgct acccgtccct cttttgaaat tgcaacgcct gatgatgtga
    16981 catcggtgct ggtttctttc gatggcgtaa actggacgcc catcagtaaa aatgcggccg
    17041 ggcagtggca acttactgca ggtagcgcat tgtctgatgg tcattatact ctccatgtcc
    17101 aggcgacgga tcgggcaggg aatacggcaa attccacgct gggctttacc gtggatacgc
    17161 agattgacgg cctgagcgtc gtgatgctgg acgacgccgg aaaggattct acggatggta
    17221 ttacgaatat tacctctcca cgttttgaaa tttcagccag agaacagttg cagagcgtga
    17281 cggtaatttt aaacgggaaa tccagcaccc tgactcaggg ggcaggtaat aaatggctgt
    17341 ttacccctga tacaccgtta gtggatggaa cttacaaaat agaaatagtg gctgaagata
    17401 tcgcaggtaa taaaattagc aaagaggtat cattcacaat agacactatt gtttctgatc
    17461 ccagtattga tttgctggat gcggatgata ctggcgaaag cgctgttgat aatattacga
    17521 gtgtcactac accacgtttc gttattggca atgtacccgc cgatattgat actgttgtaa
    17581 tcagaattaa cggcgtttct tatccggtta cggcaaatgg caataacctc tgggaatttc
    17641 aggttcccgt tgcgttaaac gatggcgtat atgaagccgt tgttgtcttc agagatattg
    17701 ccggaaatac ttctgaaact aagctgccct ttaccattga taccacgaca agcgtcagtg
    17761 tcagaatgga gccagcgtct gataccggca gctccaatag cgataacctt acgaataagc
    17821 aaaatcccaa attcgaaggt actgcagagc ccaatgcgaa actggtgatt accattgttg
    17881 acgataagtc aggtcgggag gttttaaaac acacgattac ggttggcgcc gatggcaact
    17941 ggagtgtgac gccgaatata ctgccggatg gcatgtatac catcaacgtc gtcgcaacag
    18001 atgtcgcggg aaatactgcg caaacgcagg aaagattcac tatcgatacg gttacgatcg
    18061 atcccaccat tcgcctttcg gatccatcta ttgatgatca gtatgaggca accagcctgc
    18121 gtcctgagtt caaagggctc gccgaagcgt tctcgacgat tatgattcag tgggatggga
    18181 aagtggtcgg ctcggcaaac gccaatgcga atggtgaatg gagttggacg ccgccatcag
    18241 tattagcgcc aggctcctat gttgtgagca ttgttgccaa agataaagcg ggtaatgaat
    18301 cgtcgcaggt cgactttcct gtagtaatac ctgttattga tgtcacgcct ccaaccataa
    18361 agctcagcga ggagagcgat agtggtgcct taggagactt tacgacgaat aataaaacgc
    18421 cgaccctgat tgggagcacg ttacctaata caattgtgag tatttatgtg gatggcgtga
    18481 aggtcggcga ggcgacagcg gatacagcgg gccgatatac tttccagtta tcggaaatga
    18541 aagatggcca ttatgtcgtc caggtgggta tcgtcaaccc tcgcgataat agcgaactgc
    18601 gttccaccgc cgttgatgtc actatcgata ccgaggttgc tgaactggta tggaatatat
    18661 ctggaatgca tgagggcgga tatatcaaca cggtgacgcc ggagattggc ggcaccagtg
    18721 agccaaacag caaaatcact atctttgtga atggcgttga aaaagcgatt gcttatacga
    18781 caggcgcagg acactggggc gtagtattac ccgctttggg taatgacggt aattatgaat
    18841 taacgtttaa agttgaagac gttgccggca atatcagaga gtttggtccg cagaatgtga
    18901 tactggatac ggtaatttcg ccgttaaccg tggtattacg cgaagctgat gacagtggca
    18961 aagttggcga ctggatcacc aataaatctc atgtcaccat cgatggtact gccgaagccg
    19021 gaagtacttt gaccatcagg aatccgcagg gagtggttat tgctaccctg gtggtaggca
    19081 atgatggtcg atggagcgca gaattagatc tgcgtgaagg tagtaatgcc tttgtcgtgg
    19141 tatcggaaga taaagcgggc aacggccaac aaaaagatat tctgatagaa catgatacgc
    19201 agattgaaat cagcgatatt tcattaagtc gggatactaa tagcggtgat aaatatgatc
    19261 tgattaccaa taataagtct ccggtactgg ttgccatgac cgatcccggc gcgacggtac
    19321 aggtttatat taatggtgtg ttacaaggca cagtagaggc gagttcgtca ggtaatatta
    19381 gctataccat gccggcaaat agcgccgacg gcgagtatca ggtgcaattt gttgctacgg
    19441 atactgctgg taaccgggtt gaatctgcga ttacgaccgt gacaatcgat tctcaaattg
    19501 ctgtctttga tattgatgaa gattcattac cggccctctc taataaccgg gcgttgtcag
    19561 tctcaggcgt cggggaggct ggttctcagg tcagcatctt tgtcgatggt aaattagtca
    19621 acgttgttat ggttgaggct gatggctcat ggcgcgcgcc gatactgctg caagatgatg
    19681 gtacgtttaa tattcatttc agcattactg acgttgctgg caacactcaa gtaagcaaga
    19741 attacagtgt ggatgtcgat tcatcaaccg acttcccaac gctcaacctt gaagatgcga
    19801 gcaactctgg ttcacttgac gatctgatta ctaatcacaa caagcctgtg ttagttggca
    19861 ccgcagaagc gggagccaca atccatattt atgtggatga aaagatcgtg gcaaatgtgc
    19921 ttgtgcttga agatggaacc tggtcctatc agtttgataa tgcgttaaaa gatggtgaat
    19981 attctatccg tgtggttgcc gaagacccgg caggtaatac ggcagaatcg cctcgcttac
    20041 tcgtcacgat agataccagt acgtttatcg ataatcctgc tatggtggca ggttctgata
    20101 acggtatttt cagtaatgat agtataacga gtcagacccg gcctacgttt agtatttttg
    20161 gagaaatgaa ccagagtgtt cagattttca ttgatggggt gttagtcgat acgatcacgg
    20221 tgacggacag aaatcaagtt tatcgacctg agtcaccgtt gggcgatggt tcccatagca
    20281 tttattatgt tatcaccgat aaagcaggca acacggctac ctcgaaaacg ctaaacttta
    20341 ctatcgatac ctttaatacg acgcctgtcg ccattgattc tatcggtgga caaacgttag
    20401 cagagatgac cggtagtgat ggcaaaatat atataacgga cacgacgcgt aacttattgt
    20461 ttagtggcag tgccgagccc aatagcaaaa tagaaatcat tattaatggc ttaaatgtgg
    20521 gggaagtttg ggttaatgaa aaaggccact ggcagatgcc ggtgaacccg ctttatttca
    20581 cagaaggcca actggatatc actgttaaat ctacggaccg tgctggtaac gtaaatcagg
    20641 aaaagtattc catttgggtc gatacgcata tccaggtatt taccagcgag cttgatgaca
    20701 ataaatcatc atcgaaaacg gactggtgga gtaatagctc cactattacc atgagaggta
    20761 tgggggaaat tggcgctacg gtatcattaa tcgtggcagg ggtcacgctg gcaaccgctg
    20821 tcgttgcggc taatgggcag tgggaattat cgaccgatca gcttccggaa gggaaatacg
    20881 atatcacttt gagtattgag gataacgcag gcaaccgtaa ggaagaggta catgaaatat
    20941 ttattgatcg aacgccgcca aacgctccgg tcgtaactta ttcagacatt gtcaacgatc
    21001 taattattat gcagggaacg gcggaagcca aatctcagct aataataacc gatagtaatg
    21061 ggaatactta tacgttaacc gttcctgata atggtaaatg gagtatggcg atcccgtatc
    21121 catcggaagg gaagtttacc attacgagtg tggatgcgat tggtaaccgg agtgatgatg
    21181 tccctctcga tatcatgaaa gaggttcccg ttatttcatt atctccagac tcagacagtg
    21241 gtacggtggg cgataatatt acgcgcgata agcaacctac ctttattatc gggaatctgg
    21301 aaagcgatgt tgtggtcgtt caggtcgata tcaatgggac agtatataat gctgaaaaaa
    21361 atgccgatgg cgtttggttc tttacgccag gtacaccgtt agctgatggt tcctatacga
    21421 tatcggtaat cgcaagcgat gccgcgggta atcagaaaaa ctcgttaccc attaccgtta
    21481 cgatcgacag tacgctgacg gtgccggaga ttgcgttggc agcaggtgaa gacaatggcg
    21541 tttcagacag cgataacgtg acgaatcaca cccagcctaa gttcacgctg cagcatattg
    21601 atgctgatgt gaccggggtg accgtaaacg tgacgcataa cggcgtgaca gacacctatc
    21661 aggcgacgca aggcgcggat ggctggacct tcacgccgcc agccgcctgg aatgatggta
    21721 cctacacgct gagcgtgacg gtggtggatc gcgcggggaa ctcacagcaa tctgcttcgc
    21781 tagcggtgac ggttgactca acggtgacgg taacagcgga tagccagcat gacgatgcga
    21841 gcgatgacgc cacgccaaca gcggttactc caccggagtc tgaaacagtg aatgccgaaa
    21901 gcgatacgca tcttcgtaca gtgccgtctg cggcggaaga aagcgtggtg aaggagacgg
    21961 cctatagtat tacattgtta aacgctaact ctggggatga aatagatcgt tcaattagtc
    22021 agacaccttc ttttgaaata tcagtacctg agaatattgt taatgtcagt gttatgtttg
    22081 aaggagaaga gtttactctg ccgataacta accagaaagc aatattcgaa gttccgctat
    22141 ctttggaaga tggtgaatat actatggacg tgaaattcat tgataaggac gatgatttcc
    22201 tgattaagga aaaaacattc tcagtcgatc actcctcggc ggatattgtg aacgcaatga
    22261 atgcaagagg aaagaccgag gatgatatta atgattcccc ttccacgagt tctgtagggc
    22321 acaacaataa cggcgctatt gatgttttcg ccgttaatga agttacgcta cctgtagata
    22381 atcaagaaga acacgcataa taacggaggc ccctcacctt tgggtgaggg ggtttactta
    22441 tggataaaaa actagaacct tattatttaa gtgcggaaac ggcattatct atagtgtcta
    22501 aaaaattcaa cataaaaatt gacatcaaag aggatgatat aaatttaaga tttaaaaagt
    22561 acgacagaaa taacactgat gactctatac aaatgaagaa tttctttttg tcgttagggc
    22621 tttctctaca ggatatatta tttaataatg gtgaggattt actaaatgag cctatgccga
    22681 ttttactatt aacaccagaa atgaagtgga tggtgtgtgt gagcggcggg caaaaaataa
    22741 agttggtaaa cgcgcgcggt gaactctgtt atgttgaaat tgaagatgaa tatttaaaag
    22801 agttatctgc atttagtata ctacctttaa ataaagttgt tgatagtata agagtaaaaa
    22861 atatcataaa aaactcttta tcgatgaaca agatttttta tactaaatac ttcttttcat
    22921 ctctttttat ggcaattttt gcgttaacta tcccagtatt tagtaatctg ttctatgata
    22981 agcttgttcc aagcgcttcg gtttcatcgt tatttggcgt ggctataatt gttgctgtat
    23041 ttattgtttt tgagtttatc cttcgtactt cgaaagatat ttatcagtct atcacagcaa
    23101 ggcaggatga cgtcgatatt gatatcgcat ttcttgaagc ggtactttat agtaaaaaga
    23161 aaaatggcag atccatgtca tcagcatttg tgctatggaa tgagtttcag aaaattaaac
    23221 ccgttttatt aaactcgatc tttcaacgta tagccgatat tccaatattt attatatttc
    23281 tcattgttat atatgtaaat ttaggtctgg tcgttattgt acctgttacc atgtttatcg
    23341 tctctattat tattttcctc gttaaccacc attatactaa tgagttaatg aacaaacaaa
    23401 aagaaggaca gaagaacagg aatattttta tctcagaagt tttcttatct attaaaatga
    23461 tccatacctt aaataatcaa ggtttacttt ttgattgggt caacacatca aatgaacagt
    23521 cgtatcttaa cctgaagata aggaaattaa atcttatcta tcaatctata ttggggagta
    23581 tgtcatctat tacccaaata actattatgg taatagcctt ttttatggta atcaagggtg
    23641 atgttactac tggcgcaatt gtttcatctg tcattgtctc tggtcgtatt tccgggatca
    23701 tttcgaattt ttcttctaca ttaatctcta ttttatcagc agaaaaaacc ggtaaggatc
    23761 tgctttcttt ttttgatgaa gatcaggcag aaaaaacacc ggcattacag tcaatatcaa
    23821 agtgcaatgg cgatatctct attcggggcg tgagttatca gtatgatgct caatctccga
    23881 tgattattaa tcgactgtct atagacatac ctgcggggca gcgtgtcgca gtgataggcg
    23941 aatgcggtgc aggaaaaagc tcattactgg gaatgctatc tggctacctt tcgccaacag
    24001 acggtgccat tttatatgat ggatataact taggacattt atcgcagaac tttttttctc
    24061 agcatttaag tgtggtgacg acacatgatg ttttattcac cggaaccatt gaaagtaatt
    24121 tcgcgttaaa accgcaaaac gacaggggac gagtactcaa ggcgcttcat ctggcgaact
    24181 gtggttttat cttgcaacat cctatggggc tgaagtttcc ggtgaatttt atggctaaaa
    24241 acctgtcatc cggacagcag cagcagttat tattagcacg tagtctgagc agtaacgcca
    24301 gcgtcttttt atgggatgaa ccaacatcaa atctggatga gaataccgag aagcaaattt
    24361 ttgataactt agatgagttt attcatggga aaacgttgat catggtgacg catcgtcgat
    24421 acctgataaa gtattttgac cgggtcctgg taatgaaagg tggaaaaata atccgtgatt
    24481 gttctccgga taaattatta atgtaaaata agccgcgctt gtcgctgtta tcaggtggta
    24541 ctgcttaata aaaaagaccc gttgcacaaa cgggtctttt tttgtcattt aacgagtcgg
    24601 caacgtcttc aataagttta gctcgattct gttagggcta ttccacttgc catttttgga
    24661 taaccacacc tggcggccct catcaacggc aatgcgaggg acgtgatggt tcgcaaggct
    24721 acccctggcg cgcgattccg ccttgagata accggtgggc gacttcagcg gcagcgatag
    24781 cgtatcaggt cagcaccatc ggccattctg gcggggtctg gctcatcgtt tcgaccatca
    24841 cggcttcaat gttatgccag atcgcagcga gatccatcat ggtaataccg agtaaaccgg
    24901 tggcaaacca gcaggcggat accacgccca gaccgctact gatcaccgcc agaccaatat
    24961 aatctgattt acggaaacgg atattgagcg tgctggctaa aaacatgagc acggcgctca
    25021 acagttgcca gcggagaaga acgacaccag tggttatggc agccatgaaa catttcctct
    25081 gaatagacct ttgtccagga cagcacggcg ttgttcccgg gaaacgtggg acattctggc
    25141 tatcaacgga cgtcacatca acatcgaatg aaacattgtt tctgtttcat tgtttttgtg
    25201 aactatatca caaaaacagg cttattcgcc agatcggcaa tgtatttttt gtgcgtttta
    25261 taaccttatt ttttgtgtga cttctgcgcg tccgtagaga aactgccgga aagcaaagat
    25321 gtattattac tactctttta ttttttttcg tgaaattcag acctgataaa aatatcaagt
    25381 tatttatcaa aagaaaggag taaagatgta taccccatcg tttacttgag tataaatctg
    25441 atattatcaa aaatatttag tgtcctgcct ggtatgcgaa agagattgcg cgtagttatt
    25501 aatggtaaat gttgatcggt aaaagtctgt tgctaatatt gataaattca tgcaccgtaa
    25561 acctccgttt ggttcacgtc ttattttgcc aataatagtc acaaataatg cagggaaata
    25621 ggctgaaaat gagtcaaagc acacgacgca aggtgttgag atttctcgga acgatcattg
    25681 tggtattact tcctgtattg ctggcgatct ggtttgctca tatccgggca gtctctgaaa
    25741 ccagaaatca gttacattca tttgcgcagt tggtattaga taaaacggag cgggttatcc
    25801 tgcaagcaga tttagcccgc gatgccgctg aacaatatca ggggcaagcc tgtacgccag
    25861 cccatcaaca gcgaatgctg aatattatcc gcggtcgttt gtacattaat gagttgattt
    25921 atgctaaggg ccagcgtttt ctatgctcta cggttatgac gccaacaagt ccttatttta
    25981 ttccccgcgc tgactataaa cgaaagcctg acatcgctat ttattactat cgtgatacgc
    26041 cttttttcaa cggttataaa atgacatata tgcagcgggg aaactatgtc gcggttatca
    26101 atcccttatc ttatagcgag gtgatgtcag acgatccggc gttggcctgg ggaatgtatg
    26161 atacggtgac caacaccttt ttctccctga gtgaacaggc gcaggctgat cagctattac
    26221 ctttggtaca acggagtgaa cctgtgttcc aacagggtga gcgtttctat gctctggtta
    26281 aatcagcaaa acgaccggtt gccgcgattg tttcaacctc aaagcaacgc ttttaccaga
    26341 acctctttca tcagcttacg ttaacgctac cgttagggat catctgtagc attatcgtct
    26401 tatttatgtg gtcacgatcc cggcaggcat attactcacc gcgtcgattg ctgcaacggg
    26461 ccattaccag gcaccagctt tgccttcatt atcagccgat cattgatatc cgaaacggga
    26521 catgtgtagg tgccgaagcg ctattgcgtt ggccgggtta tcacggtccg gtgatgagcc
    26581 cgtgcgaatt tattcctctg gcggaaaaag aggggatgat tgagcagatc accgattatg
    26641 tcgtcgaaga ggtatttaat gatttaggtg gttttctggc cgcgcacccg catctttatg
    26701 tctctatcaa tctctctgcc gccgattttc tctcttcccg actaattgtg atgattcatg
    26761 aaaaaacgcg tcagcattca gtgcttgcgc aacagataaa ggttgaagtg accgagcgcg
    26821 gatttattga tgtgccgaaa atgacgccga ttattcaggc gtttcgccag gcgggatacg
    26881 aggtagcaat tgatgacttt ggtaccggct attcgaactt gcataacctg tactcattaa
    26941 atgtcgacct tttaaaaatt gataaatctt ttgtcgatac gctaaccact aatagcgcca
    27001 gccatttgat tgtggaacat attattgaaa tggcgcaaag tttgcggcta aaaatcattg
    27061 ctgagggggt tgaaacggct gaacaggtta gctggttgct aaaacgcggc gtgcagtatt
    27121 gtcagggatg gcactttgcg aaggcgttac cgccgcagga attcatcgtc tggctacaac
    27181 aaacgcccgc gcctctgacg atacgcgggc agacgcccta caggcggtga cggtaatcgc
    27241 tgggagtgcg atcgaactcg cggcggaata cacgcgagaa ggtttgctgc gatacatagc
    27301 ccaggtccat cgcgatatca aaaatcgggc gctcggtcgt tcgtagctca acggccgcta
    27361 acaggagacg gcgctggcga atatactcgc ctaatgtttg atgcgttacc gtacgaaaca
    27421 tccgctgcaa ataccacttg gagtaacccg atttttttgc caccacatca atgtttagcg
    27481 gttggttgat atgttcatca atccattcga taagggtctg aattatctgc tgatgcgaca
    27541 tattgttgcc tcttaaacag tattcgattc gtcgttttgt ctgcgggcga gtataattcc
    27601 tcaagttaac ttgaggtaaa gcgatttatg gaaaaaaaat ctccccgttt aaaagcctta
    27661 ctgacgccgg gggaagttgc gaaacgtagc ggtgttgctg tgtccgccct gcacttctat
    27721 gaaagcaaag ggctaattac cagtatccgt aatagcggta accaacggcg atacaagcgt
    27781 gacgtgttgc gttatgtcgc gattatcaag attgcccagc gtatcggcat cccgctggca
    27841 actatcggcg acgcgtttgg tatcttgccg gaagggcata cgttaagcgc gaaagagtgg
    27901 aagcagctct cctcgcagtg gcgcgaagag ttagaccgac gtattcatac gctggtggcg
    27961 ttgcgcgatg agctggacgg ttgtatcggc tgcggctgtt tatcgcgtag cgactgtccg
    28021 ctgcggaatc caggcgacag gcttggcgaa cacgggacgg gcgcccggct gcttgaagat
    28081 gattaacatg cactcggcca tcgggctgag ctcacctaaa actaaagcgc cgctaagggc
    28141 gctttagttt gtttccggtc tttgtctttc gctctatccc gctgattaca ggagggtttc
    28201 ccccgacgtc aacacctctc atattgagca cgtggtggag gttccggttt gtgttgatac
    28261 tgtaagtgta agcgacgacg ccctgttcgc cagcgaaatg ctgatttttt agccgaaatt
    28321 tttacggcaa ctgccataat tttctatagt tagttggcat accttacagg agacagccat
    28381 gctgacggtg caccatttaa atcagtctcg ttcgcagcgc atcctctggg cgctggaaga
    28441 gctggcgttg ccttaccaga ttgtgcgtta ccagcgtgaa aagaccatgc tggcgccgcc
    28501 ggcattgaaa aaagtgcatc cgctgggcaa gtctccggtt atcgaagatc acggtatggt
    28561 tattgcggaa tcgggcgcca tcctggaata tttgcaggac acttacgaca atatcggacg
    28621 ctttaagcct gcggatgcgc agagaaaaca acactatcga ttctggctac attacgctga
    28681 aggttcgctc atgcccttgc tattgatgag actgctcttt acctctctgg gtaaaccgcc
    28741 ggtaccattg ggcctgcgaa cgttgggcgg cgtgatcggt aagggcgcgc aaaaagcgta
    28801 cctcaatccg caactggaaa cccatgcgcg ctttattgac gggcatctgg caaatcaccc
    28861 ctggtttgcc ggagagcagt taagtatggc ggatatccag atgagcttcc cgctatttgc
    28921 gctgcttgcc cgaggcggaa tcgctcatct cgaccatatc aacgcatgga aagcgcgggt
    28981 agaaatgcgt ccagcctggc agcgagcgat tcagcagggc ggtccgttta ccattcccgg
    29041 cggataatgg cgtttttgtg agcagattgc gcaacgtatt tgctaacagc gatgcgaaaa
    29101 attgttgctg gattgcgcag ggacgataac gtttgcgcat cgtctggcta tttattgagc
    29161 atactaagca gaaaagcata aaaagcggca aagttcagtt gaaaaagcgt tgatgatcgc
    29221 tggataatcg tttgcttttt tttgccaccc gttttgtata cgtggagcta aacgtttgct
    29281 tttttgcggc gccccggctg tcgtaaatgt agcacaagga gataacgttg cgctgttagt
    29341 ggattacctc ccacgtatac cgacgaataa taaattctca ggggatgttt tctatgtcta
    29401 cgccttcagc gcgtaccggc ggttcactcg acgcctggtt taaaatttca caacgcggga
    29461 gcaccgttcg ccaggaagtc gttgctggct taaccacgtt tctcgcgatg gtttactccg
    29521 tcatcgtggt gccagggatg ctgggtaaag ccgggttccc gcctgccgcc gtctttgtag
    29581 cgacctgcct ggtcgcaggc gtcggctcta ttgttatggg gctatgggcg aatctgccgc
    29641 tggctatcgg ttgcgctatc tcgttgacgg cgtttaccgc gtttagcctg gtcctggggc
    29701 agcatattag cgtcccggtc gcgcttggcg ccgtattcct gatgggcgta ctgtttacca
    29761 ttatctccgc taccggcatt cgtagctgga ttttgcgtaa cttgccgcag ggcgtggccc
    29821 acggaaccgg tatcggtatt ggcctgtttt tgttgctgat tgccgccaac ggcgtcggcc
    29881 tggtcattaa aaacccgctg gatggcctgc cggtcgcgct gggcgatttc gataccttcc
    29941 cggtgattat gtcgcttgtg ggtctggctg ttattctcgg tctggaaaag ctgaaagtcc
    30001 ccggcggcat tctgttgacc attattggca tttctattgt gggtttgctc ttcgatccta
    30061 acgtccattt ttccggcatt ttcgccatgc cttcgttgag cgatgaaaac ggcaactcgc
    30121 tgatcggcag cctggatatt atgggcgcgt taaaccctgt cgttctgcca agcgtgctgg
    30181 cgctggtgat gacggcggtg tttgatgcga ccggcacgat tcgtgcggtc gcagggcagg
    30241 ctaatctgct ggacagagac ggacaaatta tcgatggcgg caaagcgcta accaccgact
    30301 cactgagtag cgttttctcc ggcctggtcg gggcggcgcc agccgcggtg tatatcgagt
    30361 ctgcggccgg tacggcggcg ggtggtaaaa cgggcctgac ggcgattacc gtgggcgtgc
    30421 tgtttttgct gatcttgttt ctttcgccgc tctcttatct cgttcccgtc tacgcaaccg
    30481 ccccggcgct catgtatgtc ggtctgctga tgctgagtaa cgtggcgaaa atcgattttg
    30541 ctgatttcgt cgatgcgatg gcggggctgg taacggctgt atttattgta ctgacctgta
    30601 acatcgtcac cgggattatg atcggctttg ccacgctggt cgtcgggcgt ctggtttctg
    30661 gtgaatggcg taagctgaat atcggaactg tcgtcattgc ggtcgcgctg gtcgcttttt
    30721 atgccggcgg ctgggctatc tagttctgcc ttcattctga aaaatgggcg gcgttggtcg
    30781 cccgttttca ttttcaggac acatcacgtt accttttgcg ttaatctgaa gaaggtgaaa
    30841 ccgaggcatg atgcctttct ccatcataaa aaacatcgca aacagggaac gcatggaaat
    30901 tttcttcaca atactcatca tgacccttgt ggtctcgctg tcgggggtat ttacgcgtgt
    30961 attacccttc cagcttcctt taccccttat gcagatcgcc attggcgcgc tgttggcgtg
    31021 gccgacgttt ggtttgcatg tggaattcga cccggaactc ttcctggtgc tgtttattcc
    31081 gccgctgctg tttgcggatg gctggaaaac gccgacccgt gaatttcttg agcatggacg
    31141 agagattttc gggctggcgc tggcgctggt cctggtaacg gttgtgggaa tcggcttcct
    31201 gatttattgg ctggtgcccg gcattccgct gatccccgca tttgcgctgg ccgccgtgct
    31261 gtcgccgacc gatgcggtag cgctctccgg aattgtgggc gaggggcgta tcccgaaaaa
    31321 aatcatgggc attctgcagg gagaggcgtt aatgaacgac gcctccggtc tggtatcgct
    31381 gaaattcgcc gtcgcggtgg cgatggggac gatggtcttt accgtcggcg gcgcgacgct
    31441 ggaatttttt aaggtcgcta tcggcggtat tctggcgggt tttgtagtca gttggctgta
    31501 tggccgctcg ctgcgttttt tgagccgctg gggcggcgat gagcccgcga cgcaaatcgt
    31561 cctgctgttt ctgctgccct tcgcgtctta cctgattgcc gaacatattg gcgtctcagg
    31621 catcctggcc gcggttgccg ccgggatgac catcacccgt tctggcgtaa tgcgccgcgc
    31681 gccgctggca atgcgtttgc gcgcgaacag tacctgggcg atgctggaat ttgtctttaa
    31741 cggtatggtc tttctgctgt tgggactgca attgccaggg attctggaat cttcgctggc
    31801 ggcggcggaa gctgacccga atgtcgaaac ctggatgctc tttaccgata tcgtgctgat
    31861 ttatgcggca ttgatgctgg ttcgcttcgg ctggctgtgg accatgaaaa agttcagcct
    31921 gcgctttttg aagaagaaac cgatggagtt cgccagctgg acgtcgcgtg aaattctgat
    31981 tgcttccttc gctggcgttc gtggggcgat caccctggct ggtgtgctct ctataccgtt
    32041 acttttgccg gatggcagcg gatttccggc gcgttatgaa ctggtattcc tggcggctgg
    32101 cgtcattctg ttctcgttgt ttgtcggcgt gatcatgctg ccgctgctgt tgcaacatct
    32161 ggaagtcgcc gatcatgcgc aacagttgaa agaggagcgt atcgcccgcg cggcgacggc
    32221 ggaagtggcg attgttgcca ttcagaaaat ggaagagcgt ctggcggcgg ataccgaaga
    32281 aaacatcgat aatcagttgc ttactgaagt aagctcgcgt gtcattggta acttgcgtcg
    32341 ccgtgccgat gggcgaaacg atgtcgaaag ctccatacag gaagaaaacc tggagcgacg
    32401 tttccgtctg gcggcgctgc gttccgaacg cgccgagttg tatcatctgc gcgccacgcg
    32461 agaaatcagc aatgaaacat tgcaaaagct gctgcacgac ctggatttga tggaagctct
    32521 actgatagaa aatcagtagt ccttgtggcc cggtggcgcc atgcttatcg ggcctacaag
    32581 taggcccggt aaggtgcttg cgccgccatc cggcaagggt tttaacccat ggcttacggt
    32641 tgtttcagcc aaaacccttc gcaacaggtt aaccatgccc gggcgctgtg cgacagatac
    32701 acgccctcgc gccaaatcat gcccaactgc cagcggagat cactttccag cggtagccag
    32761 cgcagcgtgg ccttatccag acgctgacaa atcggctccg gcaaaatggc gatgccgacg
    32821 cccgcttgca ccatggcggc gagaaaatcc cattgcccgc tgcgcacggc aatccgtggt
    32881 tttacgtcat gctggctaaa taaggtcatc aactggcggc tcagggcaaa gtcttcgtta
    32941 tagataagaa gaggatgctc cgccagagct tcaggcgcga tggagtcgca ggttgtccac
    33001 tgaccggaac ggggaaccag cacgcacagc ggatggctga acagcgataa tgtcgtcagc
    33061 ccgctcgctt cttccaccgg gagcgcggtc atcgcaacat ccagctcgcc attcattacc
    33121 gcctgctgta ccgtcaggcc gccaaactcc gaaattttga gttcaacgcc agggtagcgt
    33181 tgtcgaaaca aactgattgg cccagccatc aacatgccga ccatcggggg aatacccagc
    33241 cgcagcacgc ccttattgag atggttaata tcgctcaact cggcctctaa ctggcgaaac
    33301 tcagcgagga tcgccagacc gcgttcaaac accacgcgtc cggtatcggt cagcaataac
    33361 ttacgtccgt cgcggatcag tagcgtacag ttaagctcat cttcaagatt tttcagcatc
    33421 ttgctaatgg tgggctgggt gacaaataac ttctccgctg cgcgggtgaa actttgctgg
    33481 cgcaccacct cgacaaaata acgcagcgtt ctgatatcca tgattattcc ttccgactat
    33541 gcctgcaatg attttaattc atttctgccc gtgacggagg ttctctatac tggcgctccg
    33601 tattattttt caggacattc cctcatggct gtggcgataa gccgcgttac gcctgccgtt
    33661 gtgcaacgac tccaggtacc ggttcaggta ctgctctatg caggtttatt cattttttcc
    33721 caatatcttg tctcctggct gcacctgccg ttgcccgcga atctggtcgg catggtactt
    33781 atgttggcgc tgatcgtttg ccggattatt ccgcttagct gggtacgcgc aggcgcacgc
    33841 tggctgctgg cggagatgct gttattcttt gttcccgccg tcgtggcggt agtgaactat
    33901 gcccatctgt tactggtgga cggctggcgc attttctcgg tgatagcgat cagtacctta
    33961 atggtactcg gcgcgacggc gtgggtggtg gataaagtgt atcgctatga gatgagcagg
    34021 ctaaaccgtg aataacgttc agttaagcgt actgtgcctg gtgattacgc tgggaattta
    34081 cttcgccaat aagcgtctgt atcgccgttt tcgcaaattg ccgttgatgc cattagtgtt
    34141 gacgccggca ctgctggtgt taatgctggt gttcggtcat atctcctggc aaaactatat
    34201 tagcgaatcg cactggctat tgtggctgct cggcccggcg accattgcct ttgcggtgcc
    34261 ggtgtacgat aacctcgcga ttatcaaacg tcactggatg tcgctcaccg cgggtgtagt
    34321 gacggcgacg gtggtggcgg tcaccagttc cgtttggctg gcgcgtctgt tcacgttatc
    34381 ggatgagatt cagcgtagtc tggcggtacg ttccgttact acgccgtttg cgctggcggc
    34441 ggcagaaccc ctgggcgggc agccggatct ggtggcgctg ttcgtggtcg tca
//
LOCUS       DAGWFR010000022        33378 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.022, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000022 DAGWFR010000000
VERSION     DAGWFR010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 33378)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 33378)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..33378
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.022"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(62..880)
                     /gene="cof"
                     /locus_tag="MOX77_001213"
     CDS             complement(62..880)
                     /gene="cof"
                     /locus_tag="MOX77_001213"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HMP-PP phosphatase"
                     /protein_id="HCA3356805.1"
                     /translation="MARLAAFDMDGTLLMPDHHLGRETIATLSRLRERDITLTFATGR
                     HVLEMRHILGTLSLDAYLITGNGTRIHSLEGDVLHRQDLDPQVADTVMHHAWDTRASM
                     HVFNDNGWFTGQEIPALLQAHVYSGFRYQVIDIKSIPAHQVTKICFCGDHDDLIRLRI
                     QLNEALEERAHLCFSAVDCLEVLPLGCNKGSALAVLSNHLGLSLADCMAFGDAMNDRE
                     MLGSVGRGLIMGNAMPQLIAALPHLSVIGHCGNQAVSHFLTHWLDNPHLPYSPE"
     gene            980..2680
                     /locus_tag="MOX77_001214"
     CDS             980..2680
                     /locus_tag="MOX77_001214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SgrR family transcriptional regulator"
                     /protein_id="HCA3356806.1"
                     /translation="MRLLNRLNQYQRLWQPSAGETQHVTVSELAERCFCSERHLRTLL
                     RQAQQAGWLRWEAQSGRGKRGRLQFLVTPESLRTAMMEQALEKGQQLNVLELAQLAPG
                     ELRAMLQPFMGGQWQNDTPTLRIPYYRPLDPLQPGFLPGRAEQHLAGQVFSGLTRFDR
                     DSQYPCGDLAHHWKVSADGLRWDFYIRSTLHWHNGDAVDTAQLHERLERLLTLPALSK
                     LFISVARIEVTHPQCLTFLLHRPDYWLAHRLASYCSGLAHPDLPLIGTGPFRLALFTP
                     ELVRLESHDHYHLSHPLLKAIEFWITPQLFAQDLGTSCRHPVQIAIGKPEELATLSQV
                     SSGISLGFCYLTLKKGSRLNVQQARRLIHIIHHTSLLKTLPVDENLIMPSQGLLPGWT
                     IPQWQDVDETPLPKKLTLAYHLPVELHTMAEQLRHYLATLGCELTLIFHNAKNWNNCP
                     ALAQADLMMGDRLIGEAPEYTLEQWLRCDQIWSHVLDAPAFSHLQATLDALQIQPNEK
                     DRRAALQQVFANLMDDATLTPLFNYHYRISAPPGVNGVRLTPRGWFEFSEAWLPPPSP
                     "
     gene            2745..3440
                     /gene="queC"
                     /locus_tag="MOX77_001215"
     CDS             2745..3440
                     /gene="queC"
                     /locus_tag="MOX77_001215"
                     /EC_number="6.3.4.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HCA3356807.1"
                     /translation="MKRAVVVFSGGQDSTTCLAQARHQYDEVHCVTFDYGQRHRAEID
                     VARALALKLGARAHKVLDVTLLNELAVSSLTRDSIPVPDYEPNADGIPNTFVPGRNIL
                     FLTLAAIYAYQVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFETPL
                     MWIDKAETWALADYWGQLDLVREETLTCYNGIKGDGCGHCAACNLRANGLNHYLSNKA
                     AVMAAMKQKTGLR"
     gene            complement(3547..3945)
                     /gene="fadM"
                     /locus_tag="MOX77_001216"
     CDS             complement(3547..3945)
                     /gene="fadM"
                     /locus_tag="MOX77_001216"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain acyl-CoA thioesterase FadM"
                     /protein_id="HCA3356808.1"
                     /translation="MQTQIKVRGYHLDVYQHVNNARYLEFLEEARWDGLENSDSFQWM
                     TARNIAFVVVNININYRRPAVLSDLLTVTSQVQQLNGKSGVLSQTITLEPEGQVVADA
                     LITFVCIDLKTQKALPLEGELREKLEQMVQ"
     gene            complement(4049..4423)
                     /locus_tag="MOX77_001217"
     CDS             complement(4049..4423)
                     /locus_tag="MOX77_001217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HCA3356809.1"
                     /translation="MKHGIKALLITLSLTCAGMAHSALAATPVAKNAAVETKADTPSS
                     SSAKAALPAKASDDEGTRVSINTASAEDLARVMNGVGLKKAQAIVSYREEYGPFKTVD
                     DLKQVPGMGSALVERNLAVLTL"
     gene            complement(4573..6444)
                     /gene="ppiD"
                     /locus_tag="MOX77_001218"
     CDS             complement(4573..6444)
                     /gene="ppiD"
                     /locus_tag="MOX77_001218"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HCA3356810.1"
                     /translation="MMDSLRTAANSLVLKIIFVIIIVSFILTGVSGYLIGGSNNYAAK
                     VNGQEISRAQFENAFNNERNRMQQQLGDRYSELAANEGYMKSLRQQVLNRLIDEALLD
                     QYSRELKLGISDEQVKQAIFATPAFQVDGKFDNNRYNAIVNQMGMTADQYTQALRNQL
                     TTQQLINGVAGTDFMLKGETDELAALVSQQRVVREAVIDVNALAAKQQVTDQEVSSYY
                     DQNKVRFMTPEQFRVSYIKLDAATMQAPVSDADIQAYYDQHVDQFTQPERIRYSIIQT
                     KTEDDAKAVLDALNKGEDFATLAKEKSTDIISARNGGDMGWLEESATVPELKNAGLKE
                     KGQISGVIKSSVGFLVARLDDIQPAKVKPLSEVRDDIAAKVKQEKALDAYYALQQKVS
                     DAASNDNESLAGAEQVAGVKAVETGWFSRDTLPEELNFKPVADAIFNGGLVGENGTPG
                     PNSDIITVDGDRAFVVRVSEHKPEAVKPLAEVKEQVTALVKHNKAEQQAKLDAEKLLV
                     ELKAGKGAEAMKAAGLSFGEPKTLSRTSQDPVSQAAFALSLPTKDKPVYGVANDMQGN
                     VVLLAFDEVKAGAMPEAQKKAMVQGITQNNAQIVFEALMSNLRKEAKIKIGDALEQQ"
     gene            complement(6735..7007)
                     /gene="hupB"
                     /locus_tag="MOX77_001219"
     CDS             complement(6735..7007)
                     /gene="hupB"
                     /locus_tag="MOX77_001219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016535194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein HU-beta"
                     /protein_id="HCA3356811.1"
                     /translation="MNKSQLIEKIAAGADISKAAAGRALDAIIASVTESLKEGDDVAL
                     VGFGTFAVKERAARTGRNPQTGKEITIAAAKVPSFRAGKALKDAVN"
     gene            complement(7216..9570)
                     /gene="lon"
                     /locus_tag="MOX77_001220"
     CDS             complement(7216..9570)
                     /gene="lon"
                     /locus_tag="MOX77_001220"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001469947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HCA3356812.1"
                     /translation="MNPERSERIEIPVLPLRDVVVYPHMVIPLFVGREKSIRCLEAAM
                     DHDKKIMLVAQKEASTDEPGVNDLFTVGTVASILQMLKLPDGTVKVLVEGLQRARISA
                     LSDNGEHFSAKAEYLDSPAIDEREQEVLVRTAISQFEGYIKLNKKIPPEVLTSLNSID
                     DPARLADTIAAHMPLKLADKQSVLEMSDVNERLEYLMAMMESEIDLLQVEKRIRNRVK
                     KQMEKSQREYYLNEQMKAIQKELGEMDDAPDENEALKRKIDAAKMPKEAKEKAEAELQ
                     KLKMMSPMSAEATVVRGYIDWMVQVPWNARSKVKKDLRQAQEILDTDHYGLERVKDRI
                     LEYLAVQSRVNKIKGPILCLVGPPGVGKTSLGQSIAKATGRKYVRMALGGVRDEAEIR
                     GHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNV
                     AFSDHYLEVDYDLSDVMFVATSNSMNIPAPLLDRMEVIRLSGYTEDEKLNIAKRHLLP
                     KQIERNALKKGELTVDDSAIIGIIRYYTREAGVRSLEREISKLCRKAVKQLLLDKSLK
                     HIEINGDNLHDYLGVQRFDYGRADSENRVGQVTGLAWTEVGGDLLTIETACVPGKGKL
                     TYTGSLGEVMQESIQAALTVVRARAEKLGINPDFYEKRDIHVHVPEGATPKDGPSAGI
                     AMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHRGGIKTVLIPFEN
                     KRDLEEIPDNVIADLDIHPVKRIEEVLTLALQNEPSGMQVVTAK"
     gene            complement(9756..11027)
                     /gene="clpX"
                     /locus_tag="MOX77_001221"
     CDS             complement(9756..11027)
                     /gene="clpX"
                     /locus_tag="MOX77_001221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001396736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATP-binding subunit ClpX"
                     /protein_id="HCA3356813.1"
                     /translation="MTDKRKDGSGKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLC
                     NDIIREEIKEVAPHRERSALPTPHEIRTHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG
                     DTSNGVELGKSNILLTGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVEN
                     IIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT
                     VAAVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVKA
                     KSDKASEGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALVQILKEPKNALT
                     KQYQALFNLEGVDLEFRDEALNAIARKAMARKTGARGLRSIVEAALLDTMYDLPSMED
                     VEKVVIDESVIAGQSKPLLIYGKPEAQASGE"
     gene            complement(11279..11902)
                     /gene="clpP"
                     /locus_tag="MOX77_001222"
     CDS             complement(11279..11902)
                     /gene="clpP"
                     /locus_tag="MOX77_001222"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006809880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HCA3356814.1"
                     /translation="MSYSGERDNLAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIF
                     LTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVS
                     TICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVK
                     GRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN"
     gene            complement(12149..13447)
                     /gene="tig"
                     /locus_tag="MOX77_001223"
     CDS             complement(12149..13447)
                     /gene="tig"
                     /locus_tag="MOX77_001223"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001716227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HCA3356815.1"
                     /translation="MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGF
                     RKGKVPMNIVAQRYGASVRQDVLGDLMSRNFVDAIIKEKINPAGAPNYVPGEYKVGED
                     FTYSVEFEVYPEVELTGLESIEVEKPVVEVTDADVDVMLDTLRKQQATWKEKDGAADA
                     EDRVTIDFTGSVDGEEFEGGKATDFVLAMGQGRMIPGFEDGVKGHKAGEEFTIDVTFP
                     EEYHAENLKGKAAKFVINLKKVEERELPELTEEFIKRFGVEDGSVAGLRAEVRKNMER
                     ELKGAVRNRVKSQAIEGLVKANDIDVPSALIDSEIDVLRRQAAQRFGGNEKQALELPR
                     ELFEEQAKRRVVVGLLLGEVIRTNELKADEERVKGLIEEMASAYEDPKEVIEFYSKNK
                     ELMDNMRNVALEEQAVEAVLAKAKVSEKATSFNELMNQQA"
     gene            complement(13794..14111)
                     /gene="bolA"
                     /locus_tag="MOX77_001224"
     CDS             complement(13794..14111)
                     /gene="bolA"
                     /locus_tag="MOX77_001224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator BolA"
                     /protein_id="HCA3356816.1"
                     /translation="MMIREQIEEKLRTAFDPVFLEVVDESYRHNVPAGSESHFKVVLV
                     SDRFTGERFLNRHRMIYGTLTAELSTTVHALALHTYTLKEWEGLQDTIFASPPCRGAG
                     SIA"
     gene            14415..14993
                     /locus_tag="MOX77_001225"
     CDS             14415..14993
                     /locus_tag="MOX77_001225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005225436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HCA3356817.1"
                     /translation="MLKKLLFPLVALFMLAGCATPPTTIDVAPKITLPQQDPSLMGVT
                     VSITGADQRQDQALAKVTRNNQLVTLTASRDLRFLLQEVLEKQMTARGYMIGPNGAVN
                     LQIIVNQLYADVSQGSVRYNIATKADIAIIATAANGNKMTKNYRANYSIEGAFQASNQ
                     NIADAVNSVLTDTIADMSQDTSIHDFIKQNAR"
     gene            15037..16512
                     /gene="ampG"
                     /locus_tag="MOX77_001226"
     CDS             15037..16512
                     /gene="ampG"
                     /locus_tag="MOX77_001226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="muropeptide MFS transporter AmpG"
                     /protein_id="HCA3356818.1"
                     /translation="MSSQYLRIFQQPRSAILLILGFASGLPLALTSGTLQAWMTVENI
                     DLKTIGFFSLVGQAYVFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLAAIAAMGFLE
                     PGTQLRWMAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLGMLVSG
                     GLALWLADRWLGWQGMYWLMAALLIPCIIATLLAPEPTDTIPSPKSLEQAVVAPLRDF
                     FGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGVVNKTLGLLATIVGA
                     LYGGILMQRLSLFRALLIFGILQGASNAGYWLLSITDKNMFSMGAAVFFENLCGGMGT
                     AAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVVAA
                     VPGLLLLLVCRQTLEYSWQSERFIPRTQYRGTYNFALSILLAGVALLAVWVLLLTMNA
                     LDYTNFSFLPELLETAVAIAVCGIVFGGLLDYLALRKTRLL"
     gene            16965..17921
                     /gene="cyoA"
                     /locus_tag="MOX77_001227"
     CDS             16965..17921
                     /gene="cyoA"
                     /locus_tag="MOX77_001227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit II"
                     /protein_id="HCA3356819.1"
                     /translation="MRLRKYNKSLGWLSLIAGTALLSGCNSALLDPKGQIGLEQRSLI
                     LTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIF
                     LAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTP
                     VYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGM
                     KFKAIATKDRAEFDQWVAKAKQSPNTMNDMAAFEKVAMPSEYNKVEYFSSVKPDLFKD
                     VINKFMGHGKSMDMTQPEGEHSSHEGMEGMDMSHAESANSKG"
     gene            17932..19923
                     /gene="cyoB"
                     /locus_tag="MOX77_001228"
     CDS             17932..19923
                     /gene="cyoB"
                     /locus_tag="MOX77_001228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002444673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit I"
                     /protein_id="HCA3356820.1"
                     /translation="MFGKLSLDAVPFHEPIVMVTIAAIIVGGLAILAAITYFGKWTYL
                     WKEWLTSVDHKRLGIMYIIVAIVMLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQI
                     FTAHGVIMIFFVAMPFVIGLMNLVVPLQIGARDVAFPFLNNLSFWFTVVGVILVNLSL
                     GVGEFAQTGWLAYPPLSGIEYSPSVGVDYWIWALQLSGIGTTLTGINFFVTILKMRAP
                     GMTMFKMPVFTWASLCANVLIIASFPILTVTVALLTLDRYLGTHFFTNDMGGNMMMYI
                     NLIWAWGHPEVYILILPVFGVFSEIAATFSRKRLFGYTSLVWATVCITVLSFIVWLHH
                     FFTMGAGANVNAFFGITTMIIAIPTGVKIFNWLFTMYQGRIVFHSAMMWTIGFIVTFS
                     VGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGGVVFGCFAGMTYWWPKAFGFKLNE
                     TWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQIDPQFHTMLMVAAAGAALIALG
                     ILCQLIQIFVSIRDRDQNRDLTGDPWGGRTLEWSTSSPPPFYNFAVVPHVHERDAFWE
                     MKEKGEAYQQPGQYEEIHMPKNSGAGIVIAAFATVFGFAMIWHIWWLAIVGFAGMIIS
                     WIVKSFDEDVDYYVPVPEVEKLENQHFDEITKAGLKNGN"
     gene            19913..20527
                     /locus_tag="MOX77_001229"
     CDS             19913..20527
                     /locus_tag="MOX77_001229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit III"
                     /protein_id="HCA3356821.1"
                     /translation="MATDTLTHATAHAHEHGHHDAGQNKIFGFWVYLMSDCILFSILF
                     ATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFSSITYGMAAIAMHKNNKSQVISWL
                     ALTFLFGAGFIGMEIYEFHHLIVNGMGPDRSGFLSAFFALVGTHGLHVTSGLIWMAVL
                     MVQVARRGLTSTNRTRIMCLSLFWHFLDVIWICVFTVVYLMGAM"
     gene            20527..20856
                     /locus_tag="MOX77_001230"
     CDS             20527..20856
                     /locus_tag="MOX77_001230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit IV"
                     /protein_id="HCA3356822.1"
                     /translation="MSHSTESGGASHGSVKTYMTGFILSVILTVIPFWMVMTGAASPA
                     VILGSILAMAVVQILVHLVCFLHMNTKSDEGWNMTAFIFTVLIIAILVVGSIWIMWNL
                     NYNMMMH"
     gene            20868..21758
                     /gene="cyoE"
                     /locus_tag="MOX77_001231"
     CDS             20868..21758
                     /gene="cyoE"
                     /locus_tag="MOX77_001231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoheme IX farnesyltransferase"
                     /protein_id="HCA3356823.1"
                     /translation="MMFKQYLQVTKPGIIFGNLISVIGGFLLASKGSIDYPLFIYTLV
                     GVSLVVASGCVFNNYIDRDIDRKMERTKNRVLVKGLISPGVSLVYATLLGIAGFMLLW
                     FGANPLACWLGVMGFVVYVGVYSLYMKRHSVYGTLIGSLSGAAPPVIGYCAVTGDFDS
                     GAAILLAIFSLWQMPHSYAIAIFRFKDYQAANIPVLPVIKGISVAKNHITLYIIAFAV
                     ATLMLTLGGYAGYKYLVVAAAVSVWWLGMALRGYKVEDDKVWARKLFGFSIIAITALS
                     IMMSVDFMVPNSQNLLTYVW"
     gene            complement(21806..23275)
                     /locus_tag="MOX77_001232"
                     /pseudo
     CDS             complement(21806..23275)
                     /locus_tag="MOX77_001232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001524005.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
     gene            complement(23287..24796)
                     /locus_tag="MOX77_001233"
                     /pseudo
     CDS             complement(23287..24796)
                     /locus_tag="MOX77_001233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459433.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SEL1-like repeat protein"
     gene            24971..25101
                     /locus_tag="MOX77_001234"
                     /pseudo
     CDS             24971..25101
                     /locus_tag="MOX77_001234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032491235.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            25332..26696
                     /locus_tag="MOX77_001235"
     CDS             25332..26696
                     /locus_tag="MOX77_001235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016507029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3356824.1"
                     /translation="MNDYKMTPGELRATWGLGTVFSLRMLGMFMVLPVLTTYGMALQG
                     ASEALIGIAIGIYGLAQAIFQIPFGLLSDRIGRKPLIVGGLAVFVAGSVIAALSHSIW
                     GIILGRALQGSGAIAAAVMALLSDLTREQNRTKAMAFIGVSFGITFAIAMVLGPIVTH
                     SLGLNALFWMIAALATLGILLTIWVVPNSTNHVLNRESGMVKGSFSKVLAEPRLLKLN
                     FGIMCLHILLMSTFVALPGQLADAGFPAAEHWKVYLATMVIAFAAVVPFIIYAEVKRR
                     MKQVFLFCVGLIIVAEIVLWGAGQHFWELVIGVQLFFLAFNLMEALLPSLISKESPAG
                     YKGTAMGVYSTSQFLGVALGGSLGGWIDGTFDGQTVFLAGAVLAMVWLAVASTMKEPP
                     YVSSLRVEIPADIVADDRLKQRLLAMKGVSEALIVAEEHSAYVKIDSKVTNRFEVEQL
                     ISKG"
     gene            complement(26743..27234)
                     /locus_tag="MOX77_001236"
     CDS             complement(26743..27234)
                     /locus_tag="MOX77_001236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015965590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YajQ family cyclic di-GMP-binding protein"
                     /protein_id="HCA3356825.1"
                     /translation="MPSFDIVSEVDLQEARNGVDNAVREVESRFDFRGVEATIELNDA
                     NKTIKVLSESDFQVNQLLDILRAKLLKRGIEGASLDVPDEFVHSGKTWYVEAKLKQGI
                     ESAVQKKIVKLIKDSKLKVQAQIQGEEIRVTGKSRDDLQSVMALVRGDDLGQPFQFKN
                     FRD"
     gene            27360..28271
                     /gene="panE"
                     /locus_tag="MOX77_001237"
     CDS             27360..28271
                     /gene="panE"
                     /locus_tag="MOX77_001237"
                     /EC_number="1.1.1.169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HCA3356826.1"
                     /translation="MKITVLGCGALGQLWLSALCKHGHDVQGWLRVPQPYCSVNLIDT
                     DGSFFNESLTANDPDFLAKSELLLVTLKAWQVSDAVRTLASTLPVTSPILLIHNGMGT
                     IEELQSIQQPMLMGTITHAARRDGNIIIHVANGTTHIGPAREQDGDYSYLAEILQGVL
                     PDVAWHNNIRAEMWRKLAVNCVINPLTALWNCPNGELRHHTDEINAICEEVAAVIERE
                     GYHTSADDLCYYVEQVIDSTAENISSMLQDVRAMRHTEIDYITGYLLKRARVHGLAVP
                     ENSRLFEMVKRKESEYERSGTGMPRPW"
     gene            28234..28824
                     /gene="yajL"
                     /locus_tag="MOX77_001238"
     CDS             28234..28824
                     /gene="yajL"
                     /locus_tag="MOX77_001238"
                     /EC_number="3.5.1.124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein deglycase YajL"
                     /protein_id="HCA3356827.1"
                     /translation="MSAQALVCLAPGSEETEAVTTIDLLVRGGIHVTTASVASDGNLT
                     IVCSRGVKLLADAPLVEVADGDYDIIVLPGGIKGAECFRDSPLLVETVKQFHRSGRIV
                     AAICAAAATVLVPHDIFPIGNMTGFPALKDKIPAEQWQDKRVVWDARVKLLTSQGPGT
                     AIDFGLKIIDLLVGREKAHEVASQLVMAAGIYNYYE"
     gene            complement(28921..29730)
                     /locus_tag="MOX77_001239"
     CDS             complement(28921..29730)
                     /locus_tag="MOX77_001239"
                     /EC_number="3.11.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonoacetaldehyde hydrolase"
                     /protein_id="HCA3356828.1"
                     /translation="MNRIHAVILDWAGTTVDFGSFAPTQIFVEAFRQAFDVEITLAEA
                     RVPMGLGKWQHIEALGKLPTVDARWQAKFGRAMSAADIDAIYAAFMPLQIAKVVDFSS
                     PIAGVIDTIATLRAEGIKIGSCSGYPRAVMERLVPAAAEHGYRPDHWVATDDLVAGGR
                     PGPWMALQNVIALGIDAVAHCVKVDDAAPGISEGLNAGMWTVGLAVSGNEFGATWDAY
                     QTMSKEDVAVRREHAASKLYAAGAHYVVDSLADLPEVIAHINARLAQGERP"
     gene            complement(29740..30843)
                     /gene="phnW"
                     /locus_tag="MOX77_001240"
     CDS             complement(29740..30843)
                     /gene="phnW"
                     /locus_tag="MOX77_001240"
                     /EC_number="2.6.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-aminoethylphosphonate--pyruvate transaminase"
                     /protein_id="HCA3356829.1"
                     /translation="MTSRNYLLLTPGPLTTSRTVKEAMLFDSCTWDDDYNIGVVEQIR
                     QQLTALATASEGYTSVLLQGSGSYAVEAVLGSALGPQDKVLIVSNGAYGARMVEMAGL
                     MGIAHHAYDCGEVARPNVQAIDAILNADPTISHIAMVHSETTTGMLNPIDEVGALAHR
                     YGKTYIVDAMSSFGGIPMDIAALHIDYLISSANKCIQGVPGFAFVIAREQKLAACKGR
                     SRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQ
                     RSLVAGMRALGFNTLLDDELHSPIITAFYSPEDPQYRFSEFYRRLKEQGFVIYPGKVS
                     QSDCFRIGNIGEVYAADITALLTAIRTAMYWTK"
     gene            30983..31702
                     /gene="phnR"
                     /locus_tag="MOX77_001241"
     CDS             30983..31702
                     /gene="phnR"
                     /locus_tag="MOX77_001241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate utilization transcriptional
                     regulator PhnR"
                     /protein_id="HCA3356830.1"
                     /translation="MKSIPGDIPQYLLIKAQLQARIQSGALKSGDKLPSERELCAIFN
                     TTRITIRESLAQLESSGLIWRADRRGWFVTPERLWLDPTQNTNFHKLCREQGREPKTA
                     LLSGVLTTVPVEVMEPLQLQPFDQIYLLTRLRYADGRAVCYCENHCLPARVPELLQYD
                     LNGSLTEVYESHYNLVYTSMHLSFYPTAMPAQAAQALGVMEGRPALLLRRLNYDQHGR
                     VLDLDIEYWRHDSLRIEVDTH"
     gene            31900..32913
                     /gene="phnS"
                     /locus_tag="MOX77_001242"
     CDS             31900..32913
                     /gene="phnS"
                     /locus_tag="MOX77_001242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-aminoethylphosphonate ABC transporter
                     substrate-binding protein"
                     /protein_id="HCA3356831.1"
                     /translation="MKLSRLALLSVFALASAPSWAESVVTVYSIDGLHDGDNSWYQVQ
                     FDAFTKATGITIRYVEGGGGVVVERLAKERTNPQADVLVTAPPFIQRAAAEKLLANFN
                     TDAASAIPDANNLYSPLVKNYLSFIYNSKLLKTAPASWQDLLDGKFKNKLQYSTPGQA
                     ADGTAVMLQAFHSFGSKDASFAYLGKLQANNVGPSASTGKLTALVNKGEIYVANGDLQ
                     MNLAQMERNPNVKIFWPANDKGERSALAIPYVIGLVQGAPQSENGKKLINFLLSKEAQ
                     TRVSELSWGMPVRSDVTPSDEHYKAATAALEGVQSWQPNWDDVAVSLSADISRWHKVT
                     ESE"
     gene            32919..>33378
                     /locus_tag="MOX77_001243"
     CDS             32919..>33378
                     /locus_tag="MOX77_001243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HCA3356832.1"
                     /translation="MLMKTTAVHAPASQGTSGIVLDSLRVAYHGNVVLKPLSLTIEPG
                     EVLALIGPSGSGKTTVLRAVAGFVQPAGGRILIGDTDVTHLPPYKRGLAMVVQNYALF
                     PHLKVEDNVAFGLRAQKQPKALINERVTQALKTVGMSDYATRYPHQLSGGQ"
BASE COUNT         7519 a         9153 c         8326 g         8380 t
ORIGIN      
        1 tgggggtttt ccatagacaa aaaaagccag actgaatgtt tggcttgctg gaagagatct
       61 ctcattcggg ggaataaggt agatgcggat tgtccagcca atgcgtcaaa aagtgtgata
      121 ccgcttgatt accacaatgt ccgataaccg aaaggtgtgg cagcgcggcg ataagctgcg
      181 gcatggcatt gcccataatg agcccccgcc cgacgctgcc cagcatttcc cgatcgttca
      241 tcgcgtcgcc aaacgccatg caatctgcca gtgaaagccc taaatggttg ctcaataccg
      301 ccagcgccga tcctttattg caccccagcg gtagcacttc caggcagtcg acggcagaga
      361 aacagaggtg cgcgcgttct tccagcgcct cattgagctg aatgcgcaaa cggatcagat
      421 cgtcatgatc gccgcaaaaa cagatcttcg tcacctgatg ggccggaata ctttttatat
      481 cgataacctg ataacgaaag ccgctgtaga cgtgcgcctg gagtagcgcg gggatctcct
      541 ggcctgtaaa ccagccgttg tcattaaaca catgcatact ggctcgggta tcccaggcat
      601 ggtgcatcac cgtatcggca acctgaggat cgagatcctg acgatgcagc acgtcgcctt
      661 ccagcgagtg aattcgcgtc ccgttaccgg taataagata agcatccagt gaaagcgtcc
      721 ccagaatatg ccgcatctcc agcacgtgac gacccgtagc gaatgtcaga gtgatatcgc
      781 gttcgcgcag acgcgacagc gtggcgatcg tttctctacc caaatggtga tcgggcatta
      841 ataacgtgcc atccatatca aatgctgcca gacgggccat ctctttctcc acactgtaac
      901 gcggttaact tgttgttcag tattacctga gatatacgga agtaatagtg aacagataaa
      961 aggaagtgtt ccgggtttta tgaggctact gaatcggctt aatcaatatc aacgcctctg
     1021 gcagccttcc gccggggaaa cgcaacatgt caccgttagc gaactggccg aacgctgttt
     1081 ttgtagcgag cgccatctgc gaacgctgct gcgtcaggcc cagcaggcgg gttggctaag
     1141 atgggaggcg cagtccgggc gcgggaaacg tggacggctc cagtttctgg tcacgccgga
     1201 atcgctccgc accgccatga tggaacaggc gctggaaaaa gggcagcagc tcaacgtact
     1261 ggaactggcg cagctggcgc ctggcgagtt acgggcgatg ctccagcctt ttatgggcgg
     1321 ccaatggcaa aacgatacgc caacattgcg tattccctac tatcgtccgc ttgatccgct
     1381 gcagccgggt ttcctgccag gacgcgcgga acagcatctc gcagggcaag ttttttccgg
     1441 gttaacgcgc ttcgatcgcg atagccaata tccttgcggg gatttggcgc atcactggaa
     1501 ggtttccgcc gacggtttac gctgggattt ttatattcgc tccacgctgc actggcataa
     1561 tggcgatgcg gtggataccg cgcagttaca cgaacgcctg gaaaggctgc ttaccctacc
     1621 ggcgctaagc aaattgttta ttagcgtcgc acggatcgaa gtaacgcatc ctcagtgcct
     1681 gacctttctc cttcaccgac ctgattactg gctggcgcat cgtctggcga gctattgtag
     1741 cggtctggcg catcctgacc tgccgcttat cggcaccggt ccttttcgcc tggcgttgtt
     1801 cacgccggaa ctggtgcgtc tggaaagtca tgaccattat cacctcagcc atccgctgct
     1861 gaaagcgatt gaattctgga tcaccccgca actgtttgcc caggatctgg gcaccagttg
     1921 ccgccatccg gtgcagattg ccatcggcaa accggaagag ctggcgacgc tgagtcaggt
     1981 aagtagtggt atcagtcttg gcttttgtta tttaaccctc aaaaagggct cacggctcaa
     2041 cgtacagcag gcgcggcgtc tgatacatat tatccatcat acttcgctgc tgaaaacctt
     2101 accggtagat gagaacttga ttatgccaag tcaggggctg ctacccggct ggacaatccc
     2161 gcaatggcag gacgttgatg aaacaccatt gccgaaaaaa cttaccctgg cgtatcacct
     2221 tcccgtagag ctgcatacga tggcggaaca gcttcgacat tacctggcga cgctcggctg
     2281 tgagttaacg ttgatttttc ataatgccaa aaactggaat aactgccctg cgttggcgca
     2341 agcggatctg atgatgggcg acaggctgat cggcgaagcg ccggaatata cgctggagca
     2401 gtggctacgt tgcgatcaga tctggtcaca tgtcctggac gcgcctgcgt tttcccatct
     2461 gcaggctacg cttgacgctc tgcaaattca gcccaatgaa aaagatcgcc gcgccgcgct
     2521 acaacaagtt tttgccaacc tgatggatga cgccacactt acgccgctgt ttaattatca
     2581 ctatcgcatc agcgccccac cgggcgttaa cggcgttcga ctcacccctc gcggctggtt
     2641 tgaatttagc gaagcctggc ttccgccgcc ttcgccgtga agaagctggt cgggattatc
     2701 cgtacgcgtt accatattgg ctttcgtcat tgatcaggat aactatgaaa cgcgccgttg
     2761 ttgtatttag tggaggtcag gactccacca cttgtctggc gcaagcgcgg catcagtatg
     2821 atgaagtgca ttgtgtcacg tttgattatg gtcagcgcca ccgcgcagag attgatgttg
     2881 cgcgcgcact ggcgttaaaa cttggcgcac gcgcgcataa agtgctggat gtcactttgc
     2941 tgaacgaact ggcggtcagc agcctgacgc gggatagcat tccggtgccg gactatgaac
     3001 cgaacgctga cggtatcccc aacactttcg taccgggacg caatattctc tttctgacgc
     3061 tggcggcgat ttacgcttat caggtcaaag ccgaggcggt gatcaccggc gtttgcgaga
     3121 ccgatttttc cggctatcca gactgtcgcg atgagttcgt caaagcgctg aatcacgcgg
     3181 tgaatctggg catggcgaaa gatatccgtt tcgaaacgcc cctaatgtgg attgataaag
     3241 ctgaaacctg ggcgctggcc gattattggg gccaactgga tttagttcgc gaagagacgc
     3301 tgacctgcta taacggcatt aaaggcgatg gctgtggtca ttgcgcagcc tgtaatctgc
     3361 gcgctaacgg cctgaatcat tatctgtcga ataaagcggc ggtgatggcg gcaatgaagc
     3421 aaaaaaccgg gttaaggtga ttgttttgcc ggatggcggc gcacgcacct tatccgtgcc
     3481 tggcgatatg caccatggtc aatatcgcca ggccggacaa gttcaacgcc atcagacagc
     3541 gaggcgttat tgcaccatct gttccagctt ttcacgcaat tcgccttcca gcggcagcgc
     3601 tttttgcgtt tttaaatcaa tacaaacaaa cgtgatgagc gcatcggcca ccacctgccc
     3661 ttctggctcc agcgtaatcg tctggcttaa tacgccgctt ttaccgttaa gctgttgtac
     3721 ctggctggtc acggtcagta gatcgctcaa taccgccggg cgacggtaat ttatattgat
     3781 gtttaccacc acaaaggcaa tattgcgggc cgtcatccac tgaaagctgt cgctgttttc
     3841 cagcccatcc caacgggcct cttccagaaa ttccagatag cgggcattat taacatgttg
     3901 ataaacatca agatgatatc cacgaacttt gatttgtgtt tgcatagcgc aataacctta
     3961 cgttgttgtt ataagtaagc gacaagtaca gaggtcataa ctggtatgac ctctacagtc
     4021 tggcaaattt tggccactgt gcaagtgatt acaatgttaa aactgccaga ttacgctcca
     4081 ccagcgcgct tcccattccc ggcacctgct ttaaatcatc caccgtttta aaaggaccat
     4141 actcctcccg atagctcaca atagcctgcg cttttttcag cccaacgccg ttcatcaccc
     4201 gcgccagatc ctccgcagac gcggtattaa tgctcaccct agtaccttca tcatcgctgg
     4261 ctttagcagg taatgccgct ttggcggagg atgaagaagg cgtatccgct tttgtttcca
     4321 ccgctgcatt ttttgcgaca ggcgtcgccg ccagcgcgct atgggccatg cccgcgcagg
     4381 ttaaagaaag cgtaataagc agtgctttaa ttccgtgttt catactgttt tctccttgtt
     4441 tgttaacagt gcagccacga tagcggggcg gagaaaaacg aacaaatggc aattctcaga
     4501 aatggaaaag gccgcgaaag cggcctttgt gggatacaac gttttgcaat tttttgcgaa
     4561 gcgcctcgac gattactgct gttccagagc gtcgccgatt ttgattttcg cctctttacg
     4621 cagattgctc atcagcgcct caaagacaat ttgcgcattg ttctgcgtga tgccctgcac
     4681 catcgctttt ttctgcgctt ccggcatggc gcccgctttc acctcgtcaa acgccagcag
     4741 aacgacgtta ccctgcatat cgttcgccac gccataaact ggcttatctt tcgtcggaag
     4801 gcttaacgca aaggccgcct gactcaccgg atcctgactg gtacgactta acgttttagg
     4861 ctcgccaaaa ctcagacccg ccgctttcat cgcttccgcg cctttgcccg ctttcagctc
     4921 gaccagcagt ttttccgcat ccagcttcgc ctgttgttcc gctttgttat gcttcaccag
     4981 ggcagtgacc tgttctttca cttctgccaa cggcttcacg gcttcaggtt tatgttcgct
     5041 cacgcgcaca acaaaagccc ggtcgccatc tacggtgata atgtctgaat tcggccccgg
     5101 cgtaccgttt tcgcctacca gaccgccatt aaagatagca tcggctaccg gtttgaagtt
     5161 cagctcttcc ggtaaggtgt cacggctaaa ccagccggtt tcaacggctt ttacgccagc
     5221 gacctgttca gcgcctgcta acgactcatt gtcgttgctt gccgcatcgc tcaccttctg
     5281 ctgcaacgca tagtaagcat ccagcgcttt ttcctgtttc actttcgcgg caatgtcgtc
     5341 gcgaacctcg cttaacggtt tcactttggc aggctgaata tcatccagac gcgccaccag
     5401 aaaaccgaca gacgacttaa tcacgccaga tatctggcct ttttctttta atccggcgtt
     5461 tttcagttcc ggcaccgtgg cagactcttc cagccagccc atatcgccgc cattacgcgc
     5521 agagatgata tcggtagatt tctctttcgc cagcgtggcg aaatcttcgc ccttgttcag
     5581 cgcatccagt accgctttcg catcatcttc cgttttggtc tgaataatgc tgtaacgaat
     5641 gcgctccggc tgagtaaact gatctacatg ctggtcataa taggcctgaa tatccgcatc
     5701 gctgaccggt gcctgcatcg tcgcggcatc cagcttgata tagcttacgc ggaactgttc
     5761 cggcgtcata aagcggactt tattctgatc gtagtagctg gacacttcct gatcggtcac
     5821 ctgctgcttc gccgccagcg cgttgacatc aataacggct tcacgcacca cgcgctgttg
     5881 agagactaat gccgccagtt cgtcggtttc ccctttcagc ataaaatcag taccggccac
     5941 gccgttgatc agttgctgag tggtaagctg gttacgcagc gcctgagtat actgatcggc
     6001 cgtcattccc atctgattca caatcgcgtt atagcggttg ttgtcaaact taccgtccac
     6061 ctgaaaagcg ggagtggcga aaatcgcctg ctttacctgc tcatcgctga tgcccagttt
     6121 cagttcgcgg gaatattgat ccaacagcgc ttcatctatc agacgattca gcacctgctg
     6181 gcgcaggctt ttcatataac cttcgttggc cgccagttca gaatacctgt cgcccaactg
     6241 ctgctgcata cggttacgtt cgttgttaaa cgcattctca aactgtgccc ggctgatttc
     6301 ctggccattc acttttgcgg cgtagttatt gcttccgcca atcaggtaac cactaacgcc
     6361 ggtcaaaatg aacgacacga taatgataac gaaaataatc ttgagcacga gactgtttgc
     6421 agccgtgcgt aagctgtcca tcatggtgta accacactcc gctgtaggtg actttacact
     6481 ttatctttca ggcggcttct ctgctggcta ctgagtgctt cgctcagtag ccgcgtcgac
     6541 gcaacctgaa tgatttgcgt atatagactt cacgcgcatc gcattttctg aacgcggcgc
     6601 acaaaagcct attgtgacaa gaaacgaggg caattgtcag cccgcaacgc acagaaagtc
     6661 ccgaatcgcc aataaaaaag gcacatcagt tgatgcgccc ttgtactttg tcacatcccc
     6721 cgaggggatc acgcttagtt taccgcgtct ttcagcgctt tacctgcacg gaaactcggc
     6781 actttggcag cggcgatggt gatctcttta cctgtttgcg ggttgcgacc agtacgggca
     6841 gcacgctctt taacagcaaa agtaccaaag cctaccagtg caacgtcatc cccttctttc
     6901 agagattcgg taacagaagc aataatcgca tctaacgcac gtccagccgc agccttagag
     6961 atatcagccc ctgcagcaat tttttcgatc agttgagatt tattcactct tctcttcctc
     7021 tttataattt atatcgcacc tgaatccttc gaagtacgac cgcgcagcag ttatatcagg
     7081 cctgccacgc ccttacaaca cccgttaatg gtggcagacc caatcaacca tctaaattag
     7141 ctatacaaaa aaaggctggc aagtccgaaa tagcctgcca gccctgtttt tattagcgct
     7201 atttgcgcga ggtcactatt ttgcggttac aacctgcatt ccagacggtt cgttttgcag
     7261 agcaagcgtc agaacttcct caatgcgctt cacaggatga atatccagat cggcaatcac
     7321 gttgtccgga atttcctcca gatcacgttt attttcgaat ggaattaaga ccgttttaat
     7381 cccgccgcga tgcgccgcca acagtttttc tttcaggccg ccgatcggca acacctgacc
     7441 acgcagcgtg atctcaccgg tcattgccac atctgcgcgc accggattac cggtcaggca
     7501 ggaaaccagc gcggtacaca tcgcgatacc ggcgcttgga ccgtctttcg gcgttgcgcc
     7561 ttccggcacg tgaacgtgga tatcgcgttt ttcgtaaaag tccggattaa tacccagttt
     7621 ttccgcgcgc gcgcgcacca cggtcagcgc cgcctgaata gattcctgca tcacttcacc
     7681 gagcgagccg gtgtaggtca gcttgccttt gcccggtacg caggcggttt cgatggtcaa
     7741 cagatcgccg cccacttccg tccacgccag ccccgtcacc tgacccacgc ggttttcgct
     7801 atccgcgcgg ccataatcaa agcgctgcac accgaggtag tcgtgcagat tatcgccgtt
     7861 aatttcaata tgttttaacg acttatcgag caacagttgt ttaaccgctt tacggcacag
     7921 tttggagatt tcacgctcca gactacgaac gcccgcttca cgcgtgtaat agcggataat
     7981 accgataatc gcgctatcgt cgaccgtcag ttcgcctttc ttcagcgcgt tacgctcgat
     8041 ctgcttcggc agcaggtgac gtttagcaat attcagcttc tcgtcttcgg tataaccgga
     8101 cagacggatc acttccatac gatccagcag cggcgccgga atgttcatgg agttggaggt
     8161 ggcgacgaac atcacatcgc tgagatcgta atccacttcc aggtaatgat cgctgaacgc
     8221 cacgttctgc tccgggtcca gcacctcaag cagtgcggaa gccggatcgc cgcgcatgtc
     8281 cgaggacatt ttgtcgatct catcgagcag gaatagtggg tttttaaccc ccactttggc
     8341 cattttttgg atcagtttac ccggcataga gccaatgtaa gtccggcgat gaccgcggat
     8401 ttccgcttca tcacgcacgc cgcccagcgc catacggacg tatttacgcc ctgtggcttt
     8461 agcgatggac tggcccaacg aggttttacc tacccccggc ggccccacca gacacaggat
     8521 cggccccttg attttattta cacggctttg taccgcgaga tactcaagga tgcggtcttt
     8581 cacacgctcc agaccataat ggtcagtatc gaggatttcc tgcgcctgac gcaggtcttt
     8641 tttgaccttg ctacgcgcat tccacggcac ctgcaccatc cagtcgatgt agccgcgcac
     8701 cacggtcgct tccgccgaca tcggagacat cattttcagc ttctgcagtt ccgcttccgc
     8761 tttctctttc gcctctttcg gcattttcgc cgcgtcgatc ttacgcttca gcgcttcgtt
     8821 ttcgtccggc gcgtcgtcca tctcgccaag ttctttctga atcgctttca tttgctcgtt
     8881 cagatagtac tcgcgctggg atttctccat ctgctttttc acgcggttgc gaatgcgttt
     8941 ctcaacctgc agcagatcga tttcagattc catcatcgcc atcagatatt ccagacgttc
     9001 gttaacgtcg gacatctcca gtacggactg tttatccgcc agtttcagcg gcatatgcgc
     9061 ggcgatggtg tcagccagac gtgcagggtc gtcaatgcta ttgagtgacg tcagcacttc
     9121 cggcggaatt tttttgttca gcttgatgta gccttcgaac tggctgatag cggtacgcac
     9181 cagcacttct tgttcacgct catcaatggc tggcgaatca aggtactccg ccttcgcgga
     9241 gaaatgttcg ccgttgtcag acagcgcgga aatacgcgcg cgctgtaacc cctcaaccag
     9301 cacttttacg gtgccgtcag gcagtttcag catctgcaaa atagaggcca cggtcccgac
     9361 ggtgaaaaga tcgtttacac ccggctcatc cgttgatgct tccttctggg cgaccagcat
     9421 gattttttta tcatggtcca tagccgcttc cagacaacgg atagattttt cccgccctac
     9481 aaataagggt atgaccatgt gcggataaac caccacatcg cgcaagggca atacggggat
     9541 ttcaatgcgt tcagaacgct caggattcat agagctctct cttagtttag tgtccgccag
     9601 gtaatcagat agtatagctg tgctccatac cacctataac atgtacgtca gtatatgggg
     9661 atgtttccca cacattcaac ggcgtgttta caggaaaaac gaaaggggag ataaaatccc
     9721 cccttttttg gctaactgat tgtatgaatg tttaattatt cgccagaagc ctgcgcttcc
     9781 ggtttgccgt aaatcagcaa cggcttactc tgaccggcaa taacggactc gtcaatcacc
     9841 actttttcga cgtcttccat agatggcaaa tcgtacatgg tatccagcag cgccgcttcg
     9901 acgatagaac gcaggccacg ggcaccagtt ttacgcgcca tcgctttcct ggcgatagcg
     9961 ttcagcgctt cgtcacggaa ttccagatcg acgccttcca ggttaaacag cgcctgatac
    10021 tgcttggtca gcgcattttt cggctctttc aggatttgaa ccagcgcttc ttcgctgagt
    10081 tcgttcagcg tcgccaccac tggcagacga ccgataaact caggaatcag accaaatttg
    10141 atcaaatctt ccggttcaac ctgcgacaac agctcgcctt cactggcttt gtcggacttc
    10201 gctttcaccg tcgcgccaaa accaatgccg gagccggttt caacacggtt agcgatcact
    10261 ttatccagac cggcaaacgc gccgccgcag ataaacagaa tcttagaggt atctacctgt
    10321 aagaactcct gctgcggatg tttgcgaccg ccctgcggtg gaaccgcggc gacggtgcct
    10381 tcgatcagtt tcagcaacgc ctgctgtacg ccttcgccgg aaacatcgcg ggtaatggac
    10441 ggattgtctg atttacgcga aatcttatcg atttcatcaa tgtagacaat cccacgctgc
    10501 gctttttgca cgtcgtagtc gcatttctgc aacagtttct gaatgatatt ctcgacgtct
    10561 tcccccacgt aacccgcttc ggtcagcgtg gtcgcatccg ccatagtgaa cggcacatcc
    10621 agcaagcgcg ccagcgtttc cgccagcagc gttttaccgg aaccggtcgg tccagtcagc
    10681 agaatgttgc ttttgcctaa ctcgacgcca ttgctggtat cgccgttacg cagacgcttg
    10741 tagtggttat agaccgccac cgccagcact tttttcgcct gctcctggcc gataacgtaa
    10801 tcgtccaggt gagtacgaat ttcatgcggc gtcggcagcg cactacgttc acggtgcgga
    10861 gcaacttctt taatttcttc gcgaataatg tcgttacata aatcgacgca ttcgtcgcag
    10921 atatacacgg atggaccggc aatcagcttg cgcacttcat gctggctttt gccgcaaaaa
    10981 gagcagtaca acaatttgcc cgagccatct ttgcgtttat ctgtcatgag tcaaaacctc
    11041 ttctttgttc tttgtgccgc acacgacgac gcaaatgcca ttctcaggcg caagccgcta
    11101 atcagcgttg tgccgccctt cattagtata tacacaaaat cattcgagct acatcaaggc
    11161 ggcaactcag cgactccgca ggcgcttaca taagtaagtc actgggaggc gcgctggcaa
    11221 ccaacaccga ggtagcgtga aggatgaagt gtatagcggc acacttgcgt ccagggcatc
    11281 aattacgatg ggtcaaaatt gagtcaacca aaccgtactc taccgcttca ggcgcggaga
    11341 ggaagcgatc gcgctcagta tcacgttcaa tctgctcaag agattgaccc gtatgatgcg
    11401 ccataagttc attcatgcgc ccttttactt tcaaaatttc gcgggcgtga atttcaatat
    11461 ccgtcgcctg gccctgatag ccgcccagcg gctggtggat catgacgcga gagttcggca
    11521 agcagaaacg tttgcctttc gccccggcag tcagcagaaa cgcccccata gaggccgcct
    11581 gtcccataca aatggtgctg acgtctggct taataaactg catggtgtca tagatggaca
    11641 tccccgcagt aattacgccg ccaggagaat taatgtacag atagatatct ttttccgggt
    11701 tttccgcttc caggaacagc atctgcgcca cgatcaggtt agccatatgg tcttcgacct
    11761 ggccggtcag aaatatgacg cgttccttaa gtagacgaga atagatatca aaagagcgct
    11821 caccgcgtga ggtctgttca atgaccatcg gcaccagcgc catatgaggg gccaaattat
    11881 ctcgttctcc gctgtatgac atttccgtct cctggataaa aattgaaaaa atctgctgta
    11941 ctgattgtaa cctgatggac ggattatcag ccagtccctc tgtaatgggt acggcatcgc
    12001 cataattcaa gcataacaat cttttgctct aacgctaaca ctgaaacgcg gttttcgcac
    12061 ccttaccacg caaaatgcgt gacaaaaaaa acccgtcact gaaaggtgac gggtttttgt
    12121 gcaaatttcg tgcttttaac gcgaaaaatt acgcctgctg gttcatcagc tcattgaagg
    12181 aagtggcttt ttcagacact ttcgcttttg ccagaaccgc ttcaacagcc tgttcttcca
    12241 gagcgacgtt acgcatattg tccatcagct ctttattttt gctgtagaac tcaatcactt
    12301 ctttcggatc ttcgtaagca gaggccatct cttcgatcag gcctttaacg cgttcttcgt
    12361 ccgctttcag ctcgttggta cgaatgactt cgccgagcag cagaccgaca actacacgac
    12421 gcttagcctg ttcttcgaac agttcgcgcg gcagctccag agcctgtttc tcgttaccac
    12481 caaaacgctg cgcagcctga cgacgcagaa cgtcgatttc gctgtcgatc agcgcagacg
    12541 gtacgtcgat gtcgttagct tttaccagac cttcgatcgc ctgagactta acgcggttac
    12601 gcaccgcgcc tttcagctcg cgttccatgt ttttacgtac ttcagcgcgc agaccggcta
    12661 cggaaccatc ttcaacgccg aaacgtttga tgaattcttc ggtcagttcc ggcagttcgc
    12721 gttcttcaac tttcttcagg ttgataacga acttagccgc tttacctttc aggttttcag
    12781 cgtggtactc ttccgggaag gtcacatcga tagtgaactc ttcgccagct ttgtggcctt
    12841 taacgccgtc ttcaaagccc ggaatcatac gaccctggcc catcgccaga acgaaatcgg
    12901 tcgctttgcc gccttcgaac tcttcgccgt ctacagagcc ggtgaaatcg atggtcacgc
    12961 ggtcttccgc atccgcagcg ccgtcttttt ctttccaggt cgcctgctgc ttacgcaggg
    13021 tgtccagcat cacatcaacg tcagcgtcgg tgacttcaac aaccggcttt tcaacttcga
    13081 tggattcgag gccagtcagc tcaacttccg gatagacttc aaactcgacg gagtaagtga
    13141 agtcttcacc cactttgtat tcgcccggaa catagttcgg cgcgcctgcc gggttaattt
    13201 tttctttgat gatcgcgtca acgaagttgc ggctcatcag atcgcccagc acgtcctggc
    13261 gaacagaagc gccataacgc tgagcgacga tattcatcgg tactttgcct ttacggaagc
    13321 cgtcaatacg tacttttttc gctacgttga ccagctcgct ttttacagcg gtctcgatgc
    13381 tgtcagcagc gattgtaatc gttacacggc ggccaaggcc ctgagtggtt tcaactgaaa
    13441 cttgcatctt gttacctcaa aaaatcacag tgctcggtca actctactcc gcaagcacgt
    13501 gctatttgct tcgcggaacc gggatgttct cataatcaat cacattccct gtcgtcagaa
    13561 tcatcccgaa gacgttcata tataagacgg cgcattatag cggcatcact tttgtgagtc
    13621 gagaacggtg attgtgcgat gctgcggcgg ttttcacaat tctcggctaa tttttgtctg
    13681 aatactgtac gacacgctca aaattcagac aaaataaaac ggcccgcagg ccgttttcac
    13741 ataattctgt agcaacatac tggaaaagcg gaggtagttg caaatccgtt ttgctacgcg
    13801 atgcttcccg cgccgcgaca aggaggcgac gcgaagatag tatcctgcaa tccttcccac
    13861 tctttgaggg tataagtatg cagtgccagc gcatgtacgg ttgtggaaag ttccgccgtt
    13921 aacgtaccgt aaatcatccg atgacgatta agaaaacgtt cgcctgtaaa gcgatcgctc
    13981 accagcacga ccttaaaatg gctttccgat cctgctggaa cattgtgacg atagctttca
    14041 tccacaactt cgagaaacac ggggtcgaac gctgtcctta atttttcttc tatttgctca
    14101 cgtatcatca tgaaaatctc ctccgacaac gctgtgatgt cacccatccc tttaaatact
    14161 agccgctttt accgtttcca ttacagcatg acaacaaaaa tttagctttc gtctgattat
    14221 ttcagccaaa cgtatgaagt ttactgcctt aatcattctt ttagcgctca aaatccccgc
    14281 tcgcgccgtt atcaatacca aatcggacat tacgacgaat ttacctgcgt tgaccacttc
    14341 ccctcgccgt tagcggtgtt atgatggcgg gaatttttac ctatcacgtt ttaagcgtca
    14401 ttgagagcct gaatatgtta aaaaaacttc tctttccgtt agtcgctctg tttatgctgg
    14461 caggatgcgc cacaccgccg acgaccattg acgtcgcgcc gaagatcacc ttgccacagc
    14521 aggacccgag cctgatgggc gtcaccgtta gcattaccgg cgcggaccaa cgccaggatc
    14581 aagcgttagc gaaagtcacg cgtaacaacc agttggtaac gttaaccgcc tcccgcgatt
    14641 tacgcttcct gttacaagaa gtcctggaaa aacagatgac ggcgcggggc tatatgatcg
    14701 ggcctaacgg cgcggttaat ctgcagatta ttgttaacca actgtatgct gatgtttccc
    14761 agggcagcgt gcgctacaac atcgcgacca aagcggatat cgcgattatt gcgaccgcgg
    14821 caaatggcaa caagatgacc aaaaactatc gcgccaacta ctctattgaa ggggcgttcc
    14881 aggcctctaa ccagaatatt gccgacgcgg tgaacagcgt tctgaccgat accattgctg
    14941 atatgtctca ggacaccagc attcacgatt ttatcaagca aaacgcccgt taatagcaac
    15001 aacaagaccc ggcagaagcc gggtctgtag atgcctatgt caagtcaata tttacgtatt
    15061 ttccagcaac cgcgttcagc cattctgctg atattgggtt ttgcctccgg tctcccgctg
    15121 gcgctcactt ccggtacgct acaggcgtgg atgaccgtcg agaatatcga tcttaaaacg
    15181 attggcttct tctcgctggt tggtcaggcc tatgtgttta agtttctctg gtctccgctg
    15241 atggaccgct acacgccgcc ttttttaggt cgacgtcgcg gttggttact cgccacccaa
    15301 ctgttgttac tggcggcgat tgcggcgatg ggctttcttg aacccggcac gcagctacgc
    15361 tggatggcgg cgctggcggt ggtgattgct ttttgctccg cctcgcagga tatcgtgttc
    15421 gacgcctgga aaaccgatgt gttacccgca gaagaacgcg gcgctggcgc ggcaatcagc
    15481 gtgcttggct accggttggg gatgctggtt tccggcggac tggcgctatg gctggccgat
    15541 cgctggctcg gctggcaggg catgtactgg ctgatggcgg cattgttgat cccctgcatt
    15601 atcgccacct tactggcgcc ggaaccgacc gatactatcc cctccccgaa atcgctggaa
    15661 caggccgtcg tcgcgccgct acgcgatttc tttggccgta acaacgcctg gctgatttta
    15721 ctgctcattg tgctttataa actgggtgac gccttcgcca tgagcctgac caccaccttt
    15781 ttgattcgcg gcgtcggctt tgacgccggc gaagtcggtg tggtcaataa aacgttgggc
    15841 ctgctggcga cgatcgtcgg cgcgttatac ggcggcatat taatgcagcg tctttcgctg
    15901 tttcgcgcgc tgctgatttt cggcattttg caaggcgcgt ccaacgccgg ttactggttg
    15961 ctctccatta ccgataaaaa catgttcagc atgggcgcgg cggtcttttt cgaaaatctg
    16021 tgcggcggga tgggtactgc cgcctttgtc gccttattaa tgacgctatg taataagtcg
    16081 ttttccgcaa cacagtttgc cctactgtcg gccctctccg cagtaggccg ggtttatgtt
    16141 ggtcctgtag cgggctggtt cgttgaagcg cacggctggc cgacattcta cctcttctcg
    16201 gttgtcgccg ccgttcccgg gctgttactg ttgctggtct gtcggcaaac gctggaatat
    16261 agctggcaga gcgagcgttt cattccccgc acgcaatacc gtggcaccta caatttcgcg
    16321 ctttcaatcc tgctcgcggg cgtcgctttg ctggcggtgt gggtactcct gctgaccatg
    16381 aacgcgttgg attacactaa cttttcattc ctgcccgaat tgcttgagac tgcggtagcg
    16441 attgccgtgt gcggcattgt ctttggcggg ttgctggact acctggcgct acgaaaaaca
    16501 cgcctgctgt aaaacattat ttgccgttgt aataacgacc cggaattata acggctaaat
    16561 aaccatcaat tgataaaaaa tatatttgtc tttttgtgcg caacagaatt ttggaaatta
    16621 ttggtaattt ctacgctacc tattttcttt acacgattca gccgactaaa tttaaatttc
    16681 taccgttgat tgtcctttta ttgataataa attgttaagt aattgtttta tttttacatt
    16741 ggttatacca attatccctc aacatcccac ttacagacct catccgttat aacgcaaagt
    16801 ttcaacagtg tcttaaagtt atttcgacat acttggcaac atatgtgaca cgcgcggcag
    16861 aacttggtaa cacagaacca atcatgttta cagtaatgca accttaccgt aaaatgcccc
    16921 tacactttaa acgccaccag gtcccgtgga attgaggtcg ttaaatgaga ctcaggaaat
    16981 acaataaaag tttgggatgg ttgtcattaa ttgcaggcac tgcattactc agtggctgta
    17041 attctgcgct gctggatccc aaaggacaga ttggactgga gcaacgttcg ctgatactga
    17101 cggcatttgg cctgatgttg atcgtcgtta ttcccgccat cttgatggct gttggttttg
    17161 cctggaagta tcgtgcgagt aataaggatg cgaagtatag cccgaactgg tcacactcca
    17221 ataaagtgga agccgtggtc tggacggtgc ctatcttaat catcattttc cttgccgtac
    17281 tgacctggaa aaccacgcac gcgcttgaac caagcaagcc gctggcgcat gacgaaaaac
    17341 cgatcaccat cgaagtggtt tccatggact ggaaatggtt cttcatctat ccggagcagg
    17401 gtatcgccac cgtcaacgag atcgccttcc cggcgaacac gccggtttat ttcaaagtga
    17461 cctccaactc cgtgatgaac tccttcttta tcccgcgtct gggtagccag atttatgcca
    17521 tggccggtat gcaaacacgt ttgcatctga tcgccaacga acccggaacc tacgatggca
    17581 tctccgccag ctatagcggc ccgggcttct ctggtatgaa gtttaaagct atcgccacca
    17641 aagaccgcgc agaattcgac caatgggtcg caaaagcgaa gcagtctccg aacaccatga
    17701 atgatatggc ggcgttcgag aaagtggcta tgccaagcga gtacaacaag gtggaatatt
    17761 tctccagcgt gaaaccagat ttgttcaagg acgttattaa caaattcatg ggccacggta
    17821 agagcatgga catgacccaa cctgaaggtg agcacagctc gcatgaagga atggaaggta
    17881 tggacatgag ccacgcggaa tccgccaact ccaagggttg aggaagataa gatgttcgga
    17941 aaattatcac tggatgcagt accgttccat gaacctatcg tcatggtaac gatcgctgca
    18001 attatcgtcg ggggactggc gatactggca gcgattactt acttcggtaa gtggacctac
    18061 ctatggaaag agtggttaac gtcggttgac cataaacgcc tcggtatcat gtatatcatc
    18121 gtcgcgattg tgatgctgtt acgtggtttc gccgatgcca tcatgatgcg tagccagcag
    18181 gcgcttgcct ccgcaggcga agcgggtttt ctaccgccgc accactacga tcagatcttt
    18241 accgctcacg gcgtaatcat gatcttcttc gtggcgatgc ccttcgttat cggtctgatg
    18301 aacctggtgg ttccgctgca gatcggcgcg cgcgacgttg ctttcccttt cctgaacaac
    18361 ctgagcttct ggttcaccgt tgtcggcgtt attctggtta acctctcgct gggcgtgggt
    18421 gaattcgcgc agacagggtg gctggcttat ccgccgctat cgggaataga gtacagtccc
    18481 agcgtcgggg tcgattactg gatatgggcg ttgcaactct cgggtattgg tacgacgtta
    18541 accggtatca acttcttcgt gacgatcctg aagatgcgtg cgccgggtat gacaatgttc
    18601 aagatgccgg tctttacctg ggcctctttg tgcgccaacg tactgatcat cgcctctttc
    18661 ccgattctga cggttaccgt cgcgttgctg accctggatc gctatctggg cacccatttc
    18721 tttaccaacg atatgggcgg caacatgatg atgtacatca acctgatttg ggcctggggc
    18781 catccggaag tgtacattct gattctgccg gtcttcgggg tattctccga aatcgcagcg
    18841 accttctcgc gtaaacgtct gttcggctat acctcgctgg tttgggcgac cgtctgtatt
    18901 accgtactgt cgtttatcgt ttggctgcac cacttcttca cgatgggcgc gggcgcgaac
    18961 gttaacgcct tcttcggtat caccaccatg attatcgcca tcccgaccgg ggtgaagatc
    19021 ttcaactggt tgttcaccat gtatcagggc cgtatcgtct tccattccgc aatgatgtgg
    19081 accatcggct ttatcgtgac cttctcggtc ggcggtatga ccggcgtgct gctggcggta
    19141 ccgggcgcgg acttcgtcct gcacaacagc ctgttcctga ttgcgcactt ccataacgtg
    19201 atcatcggcg gcgtggtgtt tggctgcttc gcaggtatga cttactggtg gccgaaggcg
    19261 tttggcttca agctgaacga aacctggggt aaacgcgcct tctggttctg gattatcggt
    19321 ttctttgtag cctttatgcc gctgtacgta ctgggcttca tgggcatgac ccgtcgcctc
    19381 agccagcaaa ttgatccgca gttccatacg atgctgatgg ttgccgccgc cggcgccgcg
    19441 ctgattgcgc tgggtatcct gtgccaactg attcagatct tcgtttctat tcgcgaccgc
    19501 gatcagaacc gcgatctgac cggcgaccca tggggtggcc gtacgctgga gtggtcaacc
    19561 tcgtctccgc cgccgttcta taactttgcc gttgtgccgc acgttcacga acgtgacgcc
    19621 ttctgggaaa tgaaagaaaa aggcgaagcg taccaacagc ctggacagta tgaagagatt
    19681 catatgccga aaaatagcgg tgccggtatt gttatcgccg ccttcgcgac ggtatttggc
    19741 ttcgccatga tctggcatat ctggtggctg gcgatagtgg gtttcgcagg catgatcatc
    19801 agctggattg taaaaagctt tgatgaagat gtggattact acgtgccggt cccggaagtc
    19861 gaaaaactgg aaaaccagca tttcgatgag attactaagg cagggctgaa aaatggcaac
    19921 tgatacttta acgcacgcga ctgcccacgc gcacgaacac gggcaccatg acgcaggcca
    19981 gaacaaaatc ttcggatttt gggtctacct gatgagcgac tgcattctgt tctctattct
    20041 gtttgctacc tatgccgttc tggtgaacgg caccgctggc ggcccgacag gtaaggacat
    20101 tttcgaactg ccgttcgttc tggttgaaac cttcctgctg ttatttagct ccattaccta
    20161 cggcatggcg gcgatcgcca tgcacaagaa caacaagagc caggttatct cctggctggc
    20221 gttgaccttc ttgttcggtg ccggatttat cgggatggaa atctatgaat tccatcacct
    20281 gattgttaac ggtatgggcc cggatcgcag cggcttcctg tctgcgttct tcgcgctggt
    20341 cggcacgcac ggtctgcacg tcacttccgg tttgatctgg atggcggtgc tgatggtgca
    20401 agtcgcccgt cgcggtctga ccagcactaa ccgtacccgc atcatgtgcc tgagcctgtt
    20461 ctggcacttc ctggatgtga tttggatttg cgtattcact gttgtttatc tgatgggggc
    20521 gatgtaatga gtcattctac cgagagcggc ggcgcatccc acggcagcgt aaaaacgtac
    20581 atgaccggct ttatcctgtc ggtcatcctg acggttattc cattctggat ggtgatgacc
    20641 ggcgctgcct ctccggccgt tattctggga tctatcctgg caatggcagt ggtgcagatt
    20701 ttggtgcatc tggtgtgttt cctgcacatg aacaccaaat ctgatgaagg ctggaacatg
    20761 acggccttca tctttaccgt gctgatcatc gccatcctgg ttgtgggctc catctggatt
    20821 atgtggaacc tcaactacaa catgatgatg cactaagagc ggcgagtatg atgtttaagc
    20881 aatacctgca agtaacgaaa ccaggcatca tctttggcaa cctgatctcg gtgatcgggg
    20941 gatttctgct ggcctcaaag ggcagcattg actatcccct gttcatctat acgctggtcg
    21001 gggtgtcact ggttgtggcg tcgggttgtg tatttaacaa ctacatcgac agggatatcg
    21061 acaggaagat ggaaaggacc aagaatcggg tgctggtcaa aggcctgatt tctcctggcg
    21121 tctcgctggt atacgccacc ctgctgggta ttgctggctt tatgctgctg tggtttggcg
    21181 ctaatccttt ggcctgctgg ctgggggtga tgggcttcgt ggtctacgtt ggcgtgtaca
    21241 gcttgtacat gaagcgtcac tccgtctacg gaacgctgat tggttcgctc tccggcgcag
    21301 cgccgccggt gattggctac tgcgccgtaa cgggcgactt tgacagcggc gcggcgattc
    21361 tgttggctat tttcagcctc tggcagatgc cgcactctta cgccatcgcc attttccgct
    21421 ttaaggacta tcaggcggcc aatatcccgg ttctgccggt gataaaagga atctcagtcg
    21481 ctaaaaacca catcacgctg tacatcattg cgtttgccgt tgcaacgcta atgctaacgt
    21541 tgggcggtta tgctggttac aaatacctgg tggtcgccgc ggcggtcagc gtttggtggc
    21601 tcggcatggc gctacgcggt tacaaagtgg aagatgataa ggtctgggcg cgtaagctgt
    21661 tcggcttctc tatcattgcg attaccgcac tgagtatcat gatgtctgtt gattttatgg
    21721 tgccgaattc gcagaatctg ctgacttacg tctggtaaag actttagatg gcgtatcgct
    21781 tgatacgcca tctttctttt cgcgtttaaa taaaaattcc cgccttaaga atgtccatct
    21841 ctttaccgtt aacaatcccc gtcacagcgg ttacgctata gctatcaaca tcgcaaaatt
    21901 ccggctgata gataggttgt aatgtcgatt cacgtagcgt atcagactta tacccttgta
    21961 aattgcggtt ctgcatattt agcccaaaag gctcaaatgc gataacctgc tgtgacatcg
    22021 ccccggcctt atttttcagc gccagtgaga cgcgtaaatt ctctatactg ctgactctat
    22081 ccgttttgac gacaaactcc agctcgcatg catagccgct gccctgactc gcaccgaaaa
    22141 cacgatcacg attgaaggtt aacttcggca aattcttttc acgcattgcc acagcctcag
    22201 cacgggcctg tcggtctttt tcgcaggtca cctgaaaatg gggatcgtct gcaaaacttg
    22261 ttcgcccctg agcaaacaac tccgctgcct tccggcagtc cgtgtcgaca aactgaccgt
    22321 tggtatacat ccaggcaaga tagtttaaag cgcgagactt gcccatcttc gccgcccgtt
    22381 caaagaattc aaacgcccga gcgtaatcaa gcggaacccg cgtcccggag taatagatct
    22441 caccaagatt tatgagcgca tcgacattac cctgcgcagc cgccaactcg taccactgcc
    22501 cccccttctg cagatcgcgc ttaatccctc gttttccatt caagtagaag taaccgagta
    22561 tattctgcgc atcagcctgg cccaattcag cagccttgcg gaaccattgc aacgaacgcg
    22621 cctctttatc gtcgacctca acaaaaccag agtcatagag actaccaacg ataaagttaa
    22681 gttcagggtc tctctcctgc gcccacagct ccgcaaggtg caggatatcc gcctttgaat
    22741 aacccaggcg cgtgatgcgc gcggccatcg cgctcccgcc gccggcatac tggcgtaatg
    22801 tttcaataaa ccgggaacgc tgagtaatat cgctttccgc ggcttgcttt gccgtatcta
    22861 tttcgtcggc tatcaggcgc gtcaccgtct gcgcatcagt atcgatatct gctttactgg
    22921 ttttatccgc aagctctttt gccaaaacgt catcctgcat cacccccagg ccatgcagat
    22981 aaaaataacg agcgttgtag cagccatagg gttattcaac atgacaagcc tgctcataat
    23041 acttgatagc ctgtatcgta tctttcggca cggcaacgcc gtactcataa ataaacccca
    23101 actccgccag cgcttgagca ttattatctt tggctaacgc ttttagctca tttagcgcct
    23161 gaacatcttt ctgcgcaata cggctatata acgcgtcaat atcatcacct gcctggcata
    23221 ccgatgcgaa agaaaaccca agcagaagca aaagattcca tttccgcttt atcatttttc
    23281 attcccttat tctttatcta aaaagtgcac actgtcagct ttcagcaaat cgacattctt
    23341 accgttaatc gttgccgtag cggatttcag cgtaaaatgg atatcgccga tcccgtgaca
    23401 aaaatcttgc gtatacagtg ggagatcgta tggggtaatg agaggatcaa catcatgatt
    23461 ttgcatatct atccccagag tattcaaacc gaatggcgga atcatcaacg tttcctcagt
    23521 tgccattcca tcagcatttt tcagttcaag tgtaatatgc aaattcgcca tgttacggat
    23581 tttatctgtg ccaatctgaa aaattaatgc acattctttc ggtttagccg ttatcccgcg
    23641 agagaaaaca ctctcttttt ttagggttac tttgggtaaa gcatccgcgt tttttttcga
    23701 ctctgaatat ccgctgcgca cttacttaaa aatatttttt cctcaacttt cttacctaca
    23761 tatcgagatg ctttcttgta atacgaccag gctttatcac aatcaggtgc agtacctaaa
    23821 ccgttataat acatccaact caacggcatc gttgagcgcg aattagtacc atcattttca
    23881 acctgcgtaa ataatgccag cgctttagcg taatcagtgc gccctgttgc accagaataa
    23941 tagattttac ctaacgcaat ctgtgcatcg ctgtccccct gctcagacgc ctgcccatac
    24001 catttttgcg cttcctgaat gtctggctta atcccccact catcgccctc tccccccgaa
    24061 taaatacccc ccaagagaga ttgggcctca acgacgcctt tttccgcggc ggcgcgaaac
    24121 catttcaacg aggccggcct ggctttataa ggctcatcca cataatggcc agagaaatca
    24181 ttaagggtga gtaaccccag ttgataatcc atttgtggat cgccgtcctg cccccatagc
    24241 gtagcaaggc ggaacgtttt ttcctgatta aatccgatac gactaaaaaa agcgcatcgc
    24301 tctcgggtct attatttaga gcatgaatta gtatactaat aaatgccgcc cgctgcgatt
    24361 tatccatatc ggccaatgct ttcgccacgt aaatttcttg cgaaaacttg tcaatatatt
    24421 cttgctcaat caataaatta tccagattca tttttttagc atacttattg gcctgagcgc
    24481 tatctttcgc cactccgtcg ccatgctgat aagcatactt cacattatag caaccgtagt
    24541 taccgccaag ctcacaggcc tgcttataat actgcaacgc ctgttcgcga ttcatcggta
    24601 cattaaggcc gtattcatgg ataaacccca gttcatccag aaccgaagct cttttttcca
    24661 caggcaaagc atcaaaatcc ttctgggtaa gcgcagcgta ttttacatca tctttactgt
    24721 tgttctctga tgcattcacc tggttagcaa ataaaacacc tgctaaaata cataatgata
    24781 agaatttaat tttcacaact aattcactcc ttgaataata taataaataa gactgatgac
    24841 taaccttctg cctgataaac gcgcgccatc acgcagaaag tttgctatca gtctcggcgt
    24901 tgttgaataa atcaaatttt caggagatgg acggttctga tcattgccat cgtttcagaa
    24961 tcgggtccct atggcaaagc aaaagtttaa agtcacccac tggccagcca cactcaggca
    25021 gcgcggttcg ctgacagtct gacttgacga gcctgctatt gctatatgaa gcaacagcgt
    25081 acacagcctg aaggccgtgg ctaaccgcta cactatactg agatggctca gatagccact
    25141 acagctcaag gagatcggaa tatgaatgag cacaaggcta tgctgactct cccgatcgcc
    25201 cctatcgtgt taacaattta tctctttttt agctcaactg tttcaaaaac ataatatttg
    25261 ctaattaacc ctctatttac ccggcacact ccccgcacta cactactccc agcttttata
    25321 cagaggtggc aatgaacgat tataaaatga cgccagggga gctgcgcgcc acatggggtt
    25381 tagggaccgt cttttcgttg cgtatgctgg gcatgtttat ggttctacca gtactgacca
    25441 catacggtat ggcgctacag ggcgccagcg aagcattaat cggcattgcg atcggtattt
    25501 acgggctggc gcaggctatc tttcaaattc cctttgggct gctgtccgac cgcattggcc
    25561 gtaaaccgct gattgtcggc ggactggcgg tatttgtcgc gggtagcgtc attgccgcgc
    25621 tctcccactc tatctggggc attattctgg ggcgagcgct acaggggtcc ggcgctattg
    25681 ccgccgccgt catggcgctc ctgtctgatc tgacccgaga gcaaaaccgc accaaagcga
    25741 tggcgtttat cggcgtcagc tttggtatca ccttcgcgat tgcgatggta ttagggccga
    25801 ttgttaccca tagtctggga ttgaacgcgt tgttctggat gatcgccgcc ctcgccaccc
    25861 tgggcattct tctgacgatc tgggtggttc ccaacagtac caaccatgtg ctgaatcgcg
    25921 aatccgggat ggtcaaaggc agcttcagta aagtgctggc ggagccgagg ctgctcaagc
    25981 tcaacttcgg catcatgtgt ctgcatattt tattgatgtc cacctttgtc gccctgcccg
    26041 gccagcttgc cgatgccggt ttccctgccg ccgaacactg gaaggtgtat ctggcaacca
    26101 tggtgatcgc ctttgccgcc gtcgtgcctt ttatcatcta tgctgaagtc aaacggcgga
    26161 tgaagcaggt attcctgttc tgcgtggggc tcattatcgt cgcagaaatc gtgttgtggg
    26221 gagcgggcca gcatttctgg gagctggtga ttggcgtaca actctttttc ctcgccttta
    26281 atctgatgga ggcgctgctg ccttcgctta ttagcaaaga gtcgcccgcg gggtataaag
    26341 gaacggcgat gggcgtctat tctaccagtc agtttcttgg cgtggcgctt ggcggctcgc
    26401 tgggcggctg gatagacggc acgtttgatg ggcaaaccgt tttccttgcc ggggccgtac
    26461 tggcgatggt atggctggcg gtggcaagta ccatgaaaga gccgccctat gtcagcagcc
    26521 tgcgtgtgga aattccagcg gatatcgttg ctgacgacag gctaaaacag cgactgttgg
    26581 caatgaaagg cgtaagcgaa gcgctgatcg tggcggaaga gcattccgct tacgtcaaaa
    26641 tcgacagcaa agtgaccaat cgctttgaag ttgaacagct tatcagcaaa ggatgaatgc
    26701 agcattgccg gatggcggcg aggctctatc cggcataaca acttaatcgc ggaagttttt
    26761 gaactggaac ggctggccta aatcgtcgcc gcgaaccagc gccattaccg attgcagatc
    26821 gtcacgtgat ttgcccgtca cgcgaatctc ttccccctga atttgcgcct gcaccttcag
    26881 tttgctgtct ttaatcagct tgacgatttt cttctgcacg gcgctttcaa tgccctgctt
    26941 cagcttcgct tccacatacc aggttttacc gctatgcacg aactcgtccg gtacatccag
    27001 cgaagcgcct tcaataccgc gtttaagcag cttggcgcgc agaatatcga gcaactgatt
    27061 gacctggaaa tcggactcgc tcagcacctt gatggtttta ttggcatcgt tcagttcaat
    27121 agtcgcctct acgccacgaa agtcaaaacg agactcaacc tcgcgaaccg cgttatccac
    27181 gccgttacgc gcttcctgca gatcaacttc agaaacaata tcgaaagatg gcatcttttc
    27241 ttctcccttc attttcgttg cgttgcataa tacctgcaac gaggcttaac gagaagctta
    27301 gctgatgacg ctataattag cgccataaca cctggcgctg ttgcaggtga ggaggaacaa
    27361 tgaaaattac tgtactggga tgcggagcct taggacaact ttggctttcg gcactgtgca
    27421 aacatggaca tgacgtacag ggctggctac gggtgccaca accttattgc agcgtaaatc
    27481 tgatcgatac cgatggttcc tttttcaacg aatcactgac ggcaaacgat ccggattttt
    27541 tggcgaagag cgaactgttg ttagtcacgc tgaaagcgtg gcaggtttcc gacgcagtac
    27601 gaaccctggc gtcaacccta ccggtgacgt cgcctatcct gctcattcat aatggaatgg
    27661 gaaccataga agaactgcaa agtatccaac agccgatgtt gatggggact atcacccatg
    27721 ctgcgcgccg cgacggtaat atcattattc atgtcgctaa cggtactacg catattggcc
    27781 cggcgcgcga gcaagacggc gattacagtt atctcgccga gatcctgcaa ggggtactgc
    27841 ccgatgtcgc ctggcataac aatatccgcg cagagatgtg gcgcaaactg gccgtcaact
    27901 gtgttatcaa cccgctcacc gcgctttgga actgcccgaa cggcgagctg cgccatcata
    27961 ctgatgaaat caacgcgatt tgcgaagagg tcgccgccgt gattgaacgt gagggctacc
    28021 acacatcggc agacgattta tgctattatg ttgagcaagt gattgacagt acggcagaaa
    28081 atatctcatc catgttgcag gacgtgcgcg ccatgcgcca taccgaaatt gactacatca
    28141 ccggttattt actcaagcgc gcccgcgtgc acggtctcgc cgttccggaa aatagccgcc
    28201 tgtttgaaat ggtaaagcga aaggagagtg agtatgagcg ctcaggcact ggtatgcctc
    28261 gcccctggta gtgaagagac cgaagcggtc accactatcg atctgctggt tcgcggcgga
    28321 atccacgtca ctaccgccag cgtcgccagc gatggcaacc tgacgattgt ctgctcgcgc
    28381 ggcgtgaagc tgctggcgga tgcgccgctg gttgaagttg ccgacggcga ttatgacatc
    28441 atcgtgttgc ccggcggaat taaaggcgcc gagtgctttc gcgacagccc gctgctggtc
    28501 gaaaccgtaa aacagtttca ccgctccggg cgcattgtcg cagccatttg cgccgcagcc
    28561 gctacagtgc tcgtgccgca cgatatcttc cctatcggca atatgaccgg ttttccggcg
    28621 ctgaaagata agatccccgc cgaacagtgg caggataagc gtgtggtgtg ggatgcgcgg
    28681 gtaaaattat taaccagcca gggaccgggt accgctatcg attttggctt gaaaatcatc
    28741 gacctgttgg ttggtcgtga aaaagcgcat gaagtggctt cgcaactggt gatggcggcg
    28801 gggatttata actactacga ataagaatga ttgccggatg gcggcgtaaa caccttatcc
    28861 ggcctacaaa acggtacagt ctgtaggccg gataagcggc agcgccatcc ggcagttatt
    28921 ttacgggcgt tcgccctgcg ccagacgcgc attaatatgc gcaatcacct caggtaaatc
    28981 cgccagtgaa tccaccacgt aatgcgcccc ggcggcgtac agcttgctgg ccgcgtgctc
    29041 gcggcggacc gcaacgtcct ctttcgacat tgtctgatag gcgtcccatg ttgcgccgaa
    29101 ttcgttaccc gataccgcca gccccaccgt ccacatcccc gcgttaagcc cctcgctaat
    29161 gcccggcgcg gcatcatcta ccttcacgca gtgcgcgacc gcatcaatgc ccagcgcaat
    29221 cacgttttgc agcgccatcc acggccccgg gcgaccaccc gcgaccaggt cgtccgttgc
    29281 cacccaatga tccggacgat aaccatgctc agcggcggcg ggaaccaggc gctccatcac
    29341 cgctcgtggg taaccggagc aggagcctat cttgataccc tcggctcgta gcgtcgcgat
    29401 cgtgtcgata actccggcaa taggagaaga aaaatcgaca actttagcaa tctgtaacgg
    29461 catgaaagcg gcgtagatgg catcaatatc tgctgcgctc atggcgcggc caaactttgc
    29521 ctgccagcgc gcgtcaacag taggtaattt tcccagcgct tcaatgtgtt gccatttacc
    29581 cagccccatt ggcacgcgtg cttcggcgag ggtgatctcc acatcaaatg cctgacggaa
    29641 cgcctcgacg aaaatttgcg tcggcgcgaa ggagccaaaa tcgacggtgg tgcccgccca
    29701 gtcgagaata acagcgtgaa tacggttcat catggttcct tatttcgtcc agtacatggc
    29761 ggtacgaatg gcggtcagca gggcagtgat atcggcggca tatacttcgc caatgttgcc
    29821 gatgcggaag cagtcgcttt gcgacacctt gcctggatag ataacaaagc cctgctcttt
    29881 gaggcggcga taaaattcgc taaagcgata ctgcgggtct tccggtgaat aaaaggcggt
    29941 gataatgggc gaatgaagct cgtcatccag cagcgtgtta aagcccagcg cccgcattcc
    30001 ggccaccagg ctgcgctgat tttgctgata gcgttgatga cgtgccgcca cgccaccttc
    30061 tttcgccagc tctttcagcg cctgtgcaaa cgccaggacg gtatgtgtgg gcgaagtaaa
    30121 acgccatttg ccgtggttat cctccatgca gcgccactgg gcgtagagat ctaacgacag
    30181 cgagcgggaa cgccctttgc acgcggccag tttttgctcg cgggcaatca caaaggcaaa
    30241 acccggcacg ccctggatgc atttattagc ggagctgatc agatagtcga tgtgtaatgc
    30301 tgcaatatcc atggggatgc cgccgaagct gctcatggcg tcaacgatgt aggttttgcc
    30361 atagcgatgc gccagagcgc caacctcatc aatggggttg agcatcccgg tggtcgtttc
    30421 gctatgcacc atggcgatat ggctgatcgt cgggtcggcg ttgaggatcg cgtcgatcgc
    30481 ctgcacgttc gggcgcgcaa cttcgccgca gtcgtaagcg tgatgggcga tacccataag
    30541 gccggccatc tcgaccattc gtgcgccgta tgcaccgttg ctgacgatca gcaccttatc
    30601 ctgcggcccc aatgcgcttc ccagtacggc ttccacagca tagctgccgc tgccttgcag
    30661 cagtacggag gtgtagcctt cggaggccgt tgccagtgcg gtcaactgct ggcggatctg
    30721 ttctaccacg ccgatattgt aatcatcatc ccaggtacag ctatcgaaca acatcgcttc
    30781 tttcacggtg cgagaggtgg tgagtgggcc aggggtcagc aacagatagt tacgcgaagt
    30841 catatcattt acctttggtc tataccagat tgcatttatc atgacgatct ttgccgcgat
    30901 gggtcaaaga gaaaatcgcg ctgcaacaaa aaattcatct ctgcttgtat aatggcggca
    30961 ggtaaaacgg aagcgagtaa gcatgaaatc tatcccgggc gatatcccgc agtacctgtt
    31021 gatcaaggcg cagcttcagg cgcgtattca gagcggtgcg ttgaaaagcg gtgataaact
    31081 gccgtctgaa cgcgaactgt gcgcgatctt caacaccacg cgcattacta ttcgcgaaag
    31141 cctggcgcag ctggagtcca gtgggcttat ctggcgcgcc gatcgtcgcg gttggttcgt
    31201 tacgccggaa cgcctgtggc tggatccgac ccagaacacc aacttccata agctttgccg
    31261 cgagcagggg cgggagccaa aaaccgcgct actgagcggc gtgttaacca ccgtgcctgt
    31321 cgaggtcatg gagcccctcc agctccagcc gtttgatcaa atctatctgc tgacccgtct
    31381 gcgttacgcc gatggccgcg ccgtgtgcta ctgcgaaaac cattgtttgc ccgcccgcgt
    31441 gcctgagctg ctgcagtacg atctcaacgg cagcctgacc gaggtatacg agtcgcacta
    31501 caacctcgtc tataccagca tgcatctgtc gttctacccc accgccatgc ctgcgcaggc
    31561 cgcacaggcg ctgggagtta tggaaggacg cccggcgctg ttgctgcgcc gtctgaacta
    31621 cgatcaacac gggcgagtgc tggatctgga tatcgaatac tggcgtcacg acagcctgcg
    31681 cattgaggta gatacccact agcgggtgcg ccggatgttg gctgcgggcc ttatccggcc
    31741 tgtcaatcgt atcgtctcac ggctatcccg ataagcgcag catcatccgg cgtggactga
    31801 tttatttctc tttcatcgtt ttgtcatata agccgtttag cgtaaaaagc aaacctggta
    31861 taggccagaa aatgcaacgt acgctatgag gctattacga tgaaactttc ccgacttgct
    31921 ctgctgtctg tcttcgctct cgccagcgcc ccgtcatggg cggaatcagt ggtcacggtg
    31981 tactccatcg acgggctgca cgatggcgat aacagctggt accaggtgca gtttgacgcg
    32041 ttcaccaaag cgaccggcat taccatacgc tatgttgaag gcggtggtgg cgtggtagtg
    32101 gaacgtctgg caaaagagcg tacgaatcca caggccgacg tgctggtaac cgcgccgcca
    32161 ttcattcagc gcgccgccgc cgaaaagctg ctggcgaact ttaacaccga cgccgcctcg
    32221 gctatccccg atgccaacaa cctttattcg ccgctggtaa agaattatct gagctttatc
    32281 tacaacagca agctgctgaa aactgccccg gcgagctggc aggatctgct tgacggtaaa
    32341 ttcaaaaata aactccagta ttccacgcca ggtcaggccg ctgacggcac ggcggtaatg
    32401 ctgcaggctt tccacagctt cggcagtaaa gatgccagtt ttgcgtatct cggcaagctg
    32461 caggccaata acgtcgggcc atctgcctct accggcaagc taaccgcgct ggttaataaa
    32521 ggtgaaatct acgtcgctaa cggcgacctg caaatgaacc tcgcgcagat ggaacgtaac
    32581 ccgaacgtga aaatcttctg gccggccaac gacaaaggcg agcgcagcgc gctggccatc
    32641 ccttatgtca ttggcctggt ccagggggcg ccgcagagtg aaaatggtaa aaagctgatt
    32701 aacttcctgc tgagtaaaga agcgcagact cgcgtcagcg aactctcctg gggaatgccg
    32761 gtacgcagcg acgtgacgcc gagcgacgaa cattacaagg ccgccactgc cgcgttagaa
    32821 ggcgtgcaga gctggcagcc aaattgggat gacgtagccg tttcgctgtc ggcagatatt
    32881 agccgttggc acaaagtgac cgaaagcgag taagcctgat gctgatgaaa acgactgccg
    32941 ttcacgcccc tgcatcgcag gggacatcgg ggatagtcct cgactcgctg cgtgttgcgt
    33001 atcacggcaa cgtggtgctt aaaccgctct ctttgacgat tgaacctggc gaagtgctgg
    33061 cgctgattgg cccatcagga tctggaaaaa cgacggtgct gcgtgcggtg gcgggctttg
    33121 tgcagcctgc aggcggtcgt atcctgattg gcgatacgga cgtcacccat ctgccaccct
    33181 ataaacgcgg gttggcgatg gtggtgcaga actacgcctt gttcccgcat ctgaaagtgg
    33241 aagacaacgt cgcttttggt ctgcgtgcgc agaagcagcc aaaggcgcta attaatgagc
    33301 gtgtcacgca ggcgctgaag acagttggca tgagtgatta cgccacccgt tatccgcatc
    33361 aactttctgg cggccagc
//
LOCUS       DAGWFR010000023        33244 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.023, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000023 DAGWFR010000000
VERSION     DAGWFR010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 33244)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 33244)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..33244
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.023"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..511)
                     /gene="mobB"
                     /locus_tag="MOX77_001244"
     CDS             complement(<1..511)
                     /gene="mobB"
                     /locus_tag="MOX77_001244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-guanine dinucleotide biosynthesis
                     protein B"
                     /protein_id="HCA3356833.1"
                     /translation="MIPLLAIAAWSGTGKTTLLKKLIPALCAHGIRPGLIKHTHHDMD
                     VDKPGKDSYELRKAGAAQTLVASQQRWALMTETPGQEELDLAWLVSRMDASKLDLVLV
                     EGFKHEAVAKILLFRQGCGHSEEELILDEHVIAVASDIPLAVAVPVLDLNDVSQISAF
                     ILRWLEKARS"
     gene            complement(508..1092)
                     /gene="mobA"
                     /locus_tag="MOX77_001245"
     CDS             complement(508..1092)
                     /gene="mobA"
                     /locus_tag="MOX77_001245"
                     /EC_number="2.7.7.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase MobA"
                     /protein_id="HCA3356834.1"
                     /translation="MNLDEVITGVVLAGGKARRMGGADKGLLELDGKPLWRHVADALA
                     PQLATVVISANRHLDIYQASGLKVIPDSIADFPGPLAGMLSVFQQVAGDWFLFCPCDN
                     PCIPHNLVDRLAAHRHGAPVVWVHDGERDHPTIALINRAVEPQLTAYLQAGERRVMIF
                     MRQVGGHAVDFSDCKEAFVNVNTPEELAQWQKRP"
     gene            1162..1431
                     /locus_tag="MOX77_001246"
     CDS             1162..1431
                     /locus_tag="MOX77_001246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015966571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihD family protein"
                     /protein_id="HCA3356835.1"
                     /translation="MKCKRLNEVIELLQPAWQKEPDLNLTQFLQKLAKESGFDGKLED
                     LTDDILIYHLKMRDSAKDAAIPGIQKDYEEDFKTALLRARGVIKE"
     gene            1508..2494
                     /locus_tag="MOX77_001247"
     CDS             1508..2494
                     /locus_tag="MOX77_001247"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine protein kinase"
                     /protein_id="HCA3356836.1"
                     /translation="MNDNAFTFQTLHPETIMDALFEQGIRVDSGLTPLNSYENRVYQF
                     QDEDRRRFVVKFYRPERWSVDQIREEHQFALELVKDEVPVAAPLAFNGQTLLAHQGYH
                     YAIFPSVGGRQFEADNIDQMEAVGRYLGRLHQTGRKRPFTFRPDIGLAEYLFEPRQVF
                     EDAALIPSGQKAAFLKATDTLLSAVTECWRTDFATLRLHGDCHAGNILWRDGPLFVDL
                     DDARNGPAIQDLWMLLNGNKAEQRMQLETIIEAYEEVSEFDTAEIGLIEPLRAMRLVY
                     YLAWLIRRWGDPAFPKNFPWLTGEDYWQRQTTTFIEQTKILHEPPLQLTPMY"
     gene            2511..3134
                     /gene="dsbA"
                     /locus_tag="MOX77_001248"
     CDS             2511..3134
                     /gene="dsbA"
                     /locus_tag="MOX77_001248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA"
                     /protein_id="HCA3356837.1"
                     /translation="MKKIWLALAGMVLAFSASAAQISDGKQYITLDKPVAGEPQVLEF
                     FSFYCPHCYQFEEVLHVSDNVKKKLPKGTKMTKYHVEFLGPLGKELTQAWAVAMALGV
                     EDKVTVPLFEAVQKTQTVQSAADIRKVFVDAGVKGEDYDAAWNSFVVKSLVAQQEKAA
                     ADLQLQGVPAMFVNGKYQINPQGMDTSSMDVFVQQYADTVKYLVDKK"
     gene            complement(3147..4055)
                     /locus_tag="MOX77_001249"
     CDS             complement(3147..4055)
                     /locus_tag="MOX77_001249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HCA3356838.1"
                     /translation="MTRILAAITLPLSIVLTILVTIVCSVPIIVAGMVKLLLPVPGIW
                     RKVSIFCNFMMYCWCAGLAALLRLNPHLQWDVEGLEGLSKKNWYLLICNHRSWADIVV
                     LCVLFRKHIPMNKYFLKQQLAWVPFIGLACWALDMPFMKRYSRSYLLRHPDRRGKDVE
                     TTRRSCEKFRRYPTTIVNFVEGSRFTHEKRQQTHSPYQHLLPPKAAGIAMAINVLGSQ
                     FDKLLNITLCYPNNDRHPFYDMLSGRLTRIVVRVQLEPINEELHGDYVNDKTFKRRFQ
                     RWLNTLWDKKDIQIEEIKTSYKNAGQ"
     gene            4443..7229
                     /gene="polA"
                     /locus_tag="MOX77_001250"
     CDS             4443..7229
                     /gene="polA"
                     /locus_tag="MOX77_001250"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HCA3356839.1"
                     /translation="MVQIPENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLN
                     MLRSLIMQYQPTHAAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAIVKAM
                     GLPLLAVSGVEADDVIGTLAREAEKVGRPVLISTGDKDMAQLVTQNITLINTMTNTIL
                     GPDEVVNKYGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEP
                     EKIAGLTFRGAKTMAGKLAQNKDVAYLSYKLATIKTDVELELTCEQLEVQQPIADELL
                     GLFKKYEFKRWTADVEAGKWLQAKGAKPAAKPQETVVIDESPSEPAAALSYENYVTIL
                     DDVTLESWIEKLKKAPVFAFDTETDSLDNIAANLVGLSFAIEPGVAAYVPVAHDYLDA
                     PDQISRQRALELLKPLLEDEKVRKVGQNLKYDRGVLQNYGIELRGIAFDTMLESYILN
                     SVAGRHDMDSLSDRWLKHKTITFEDIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQL
                     HLKMWPELQQHKGPLNVFENIEMPLVPVLSRVERNGVKIDPAVLHKHSEEITLRLAEL
                     EKKAHDIAGEAFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLP
                     KVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVR
                     NEEGRRIRQAFIAPEDYLIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAE
                     VFGLPLDSVTGEQRRSAKAINFGLIYGMSAFGLSRQLNIPRKEAQKYMDLYFERYPGV
                     LEYMERTRAQAKEQGYVETLEGRRLYLPDIKSSNAARRAGAERAAINAPMQGTAADII
                     KRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDLDAVAKRIHQLMENCTRIDVPL
                     LVEVGSGENWDQAH"
     gene            complement(7565..8197)
                     /locus_tag="MOX77_001251"
     CDS             complement(7565..8197)
                     /locus_tag="MOX77_001251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihA family ribosome biogenesis GTP-binding
                     protein"
                     /protein_id="HCA3356840.1"
                     /translation="MTNLNYQQTHFVMSAPDIRHLPSDCGIEVAFAGRSNAGKSSALN
                     TLTNQKSLARTSKTPGRTQLINLFEVVDGKRLVDLPGYGYAEVPEEMKRKWQRALGEY
                     LEKRQSLQGLVVLMDIRHPLKDLDQQMIQWAVESNIQVLVLLTKADKLASGARKAQLN
                     MVREAVLAFNGDVQVEAFSSLKKQGVDKLRQKLDSWFSELAPVEEIQDGE"
     gene            8437..8661
                     /locus_tag="MOX77_001252"
     CDS             8437..8661
                     /locus_tag="MOX77_001252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356841.1"
                     /translation="MSLPQKSKVMHIARTLTGSTTQDEGQERQEAKTQDCQEDKRPET
                     LVKGNGNNMECSRLREKQGVLIANRDGGTR"
     gene            8780..9295
                     /gene="yihI"
                     /locus_tag="MOX77_001253"
     CDS             8780..9295
                     /gene="yihI"
                     /locus_tag="MOX77_001253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Der GTPase-activating protein YihI"
                     /protein_id="HCA3356842.1"
                     /translation="MKKPTSAPRSKAFGKQRRKTREELNQEARDRKRLKKHRGHAPGS
                     RAAGGNSASGGGNQNQQKDPRIGSKTPVPLGVTEKVTQQHKPKSEKPMLSPQAELDLL
                     ETDERLDALLERLEAGETLSAEDQAWVDAKLDRIDELMQKLGLSYDDDEEDDEEDEKQ
                     EDMMRLLRGGN"
     gene            9484..10857
                     /gene="hemN"
                     /locus_tag="MOX77_001254"
     CDS             9484..10857
                     /gene="hemN"
                     /locus_tag="MOX77_001254"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HCA3356843.1"
                     /translation="MSEQQIDWDLALIQKYNYSGPRYTSYPTALEFSEDFEDAAFLQA
                     VARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIRHRAPLFAD
                     RHVSQLHWGGGTPTYLNKAQISRLMTLLRENFHFNTDAEISIEVDPREIELDVLDHLR
                     AEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHARDIGFTSTNIDLIYGLPKQT
                     PESFAFTLKRVTELNPDRLSVFNYAHLPTLFAAQRKIKDADLPSAQQKLDILQETIVS
                     LTQAGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGD
                     GYMQNQKELKRYYQQVDERGNALWRGITLTRDDCIRRDVIKALICNFRLDFNAVEQQW
                     GLHFAEYFAEDLQLLSPLAKDGLVDISEKGIQVTAKGRLLIRNICMCFDAYLRQKARM
                     QQFSRVI"
     gene            complement(10947..11057)
                     /locus_tag="MOX77_001255"
     CDS             complement(10947..11057)
                     /locus_tag="MOX77_001255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YshB family small membrane protein"
                     /protein_id="HCA3356844.1"
                     /translation="MLESIINLVSSGAVDSHTPQTALAAVLCAALVGLFS"
     gene            complement(11170..12579)
                     /gene="glnG"
                     /locus_tag="MOX77_001256"
     CDS             complement(11170..12579)
                     /gene="glnG"
                     /locus_tag="MOX77_001256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012133942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen regulation protein NR(I)"
                     /protein_id="HCA3356845.1"
                     /translation="MQRGIVWVVDDDSSIRWVLERALAGAGLTCITFENGNEVLAALA
                     SKTPDVLLSDIRMPGMDGLALLKQIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYL
                     PKPFDIDEAVALVERAISHYQEQQQPRNIEVNGPTTDMIGEAPAMQDVFRIIGRLSRS
                     SISVLINGESGTGKELVAHALHRHSPRAKAPFIALNMAAIPKDLIESELFGHEKGAFT
                     GANTIRQGRFEQADGGTLFLDEIGDMPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRI
                     IAATHQNLERRVQEGKFREDLFHRLNVIRIHLPPLRERREDIPRLARHFLQVAARELG
                     VEAKLLHPETETALTRLAWPGNVRQLENTCRWLTVMAAGQEVLTQDLPGELFEASAPD
                     SPSHLPPDSWATLLAQWADRALRSGHQNLLSEAQPELERTLLTTALRHTQGHKQEAAK
                     LLGWGRNTLTRKLKELGME"
     gene            complement(12588..13637)
                     /gene="glnL"
                     /locus_tag="MOX77_001257"
     CDS             complement(12588..13637)
                     /gene="glnL"
                     /locus_tag="MOX77_001257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen regulation protein NR(II)"
                     /protein_id="HCA3356846.1"
                     /translation="MASGIQPDAGQILNSLINSVLVVDDALAIHYANPAAQQLLAQSS
                     RKLFGTPLPELLSYFSLNIDLMRESLAAGQGFTDNEVTLVIDSRSHILSLTAQRLPDD
                     FILLEMAPMDNQRRLSQEQLQHAQQIAARDLVRGLAHEIKNPLGGLRGAAQLLSKALP
                     DPALTEYTKVIIEQADRLRNLVDRLLGPQHPGMHITESIHKVAERVVALVSMELPDNV
                     RLIRDYDPSLPELPHDPEQIEQVLLNIVRNALQALGPEGGEITLRTRTAFQLTLHGER
                     YRLAARIDVEDNGPGIPPHLQDTLFYPMVSGREGGTGLGLSIARNLIDQHAGKIEFTS
                     WPGHTEFSVYLPIRK"
     gene            complement(13912..15321)
                     /gene="glnA"
                     /locus_tag="MOX77_001258"
     CDS             complement(13912..15321)
                     /gene="glnA"
                     /locus_tag="MOX77_001258"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020233234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--ammonia ligase"
                     /protein_id="HCA3356847.1"
                     /translation="MSAEHVLTMLNEHEVKFVDLRFTDTKGKEQHVTIPAHQVNAEFF
                     EEGKMFDGSSIGGWKGINESDMVLMPDASTAVIDPFFADSTLIIRCDILEPGTLQGYD
                     RDPRSIAKRAEDYLRATGIADTVLFGPEPEFFLFDDIRFGASISGSHVAIDDIEGAWN
                     SSTKYEGGNKGHRPGVKGGYFPVPPVDSAQDIRSEMCLVMEQMGLVVEAHHHEVATAG
                     QNEVATRFNTMTKKADEIQIYKYVVHNVAHRFGKTATFMPKPMFGDNGSGMHCHMSLA
                     KNGTNLFSGDKYAGLSEQALYYIGGVIKHAKAINALANPTTNSYKRLVPGYEAPVMLA
                     YSARNRSASIRIPVVASPKARRIEVRFPDPAANPYLCFAALLMAGLDGIKNKIHPGEA
                     MDKNLYDLPPEEAKEIPQVAGSLEEALNALDLDREFLKAGGVFTDEAIDAYIALRREE
                     DDRVRMTPHPVEFELYYSV"
     gene            15697..17520
                     /gene="typA"
                     /locus_tag="MOX77_001259"
     CDS             15697..17520
                     /gene="typA"
                     /locus_tag="MOX77_001259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-dependent GTPase TypA"
                     /protein_id="HCA3356848.1"
                     /translation="MIENLRNIAIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMD
                     SNDLEKERGITILAKNTAIKWNDYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAF
                     DGPMPQTRFVTKKAFAHGLKPIVVINKVDRPGARPDWVVDQVFDLFVNLDATDEQLDF
                     PIIYASALNGIAGLDHEDMAEDMTPLYQAIVDHVPAPDVDLDGPLQMQISQLDYNNYV
                     GVIGIGRIKRGKVKPNQQVTIIDSEGKTRNAKVGKVLTHLGLERIDSDIAEAGDIIAI
                     TGLGELNISDTICDPQNVEALPALSVDEPTVSMFFCVNTSPFCGKEGKFVTSRQILDR
                     LNKELVHNVALRVEETEDADAFRVSGRGELHLSVLIENMRREGFELAVSRPKVIFREI
                     DGRKQEPYENVTLDVEEQHQGSVMQALGERKGDLKNMNPDGKGRVRLDYVIPSRGLIG
                     FRSEFMTMTSGTGLLYSTFSHYDDIRPGEVGQRQNGVLISNGQGKAVAFALFGLQDRG
                     KLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKLTNMRASGTDEAVILVPPIKMSLE
                     QALEFIDDDELVEVTPTSIRIRKRHLTENDRRRANRGQKEE"
     gene            complement(17575..18309)
                     /locus_tag="MOX77_001260"
     CDS             complement(17575..18309)
                     /locus_tag="MOX77_001260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family phosphatase"
                     /protein_id="HCA3356849.1"
                     /translation="MRYRLIAFDLDGTLLNRNKQILPESLTAIRQMQDMGCRIMLVTG
                     RSHREAYAYYQTLALTEPMICCNGSYIYQPAQQQILDPLPLTHLQTEKILARVYPLKP
                     TIRADDKIIFQADELSSRENIWQISVVHRHIKQLQNIAEFIQHELQLSCTWSWHHQLD
                     ILQKGCSKGQSLARYAQQQHIAMREVMAFGDNDNDAEMLRLAGLGVAMGNASARAKVY
                     ADSVIGRHNTPTIADFLTTLSLSQRE"
     gene            complement(18294..19172)
                     /locus_tag="MOX77_001261"
     CDS             complement(18294..19172)
                     /locus_tag="MOX77_001261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="STM4011 family radical SAM protein"
                     /protein_id="HCA3356850.1"
                     /translation="MSIPALRDIHTLFYRGYLKSCNYHCGYCPFHKHARNDKKRDEAA
                     LWRMVDHLPLLGTPLNVMITPYGEALRLRYYMAALADISRYPHVQAVGIQTNASFSLM
                     SLLESFRAGGGDISKLRLWCSFHPSQITAERFLQQCLALSAAGITWCAGAVASMKDID
                     QFRWLRQRLPDQNYFWFNANECANTRHTVEETIAFSELDPLYVVETQQWPAQLDICTA
                     GRKSIFMNAEGDLFACHISKIKMGNLYQQRLNSPACQAKQCHCFLAYQHRLDIPLLNH
                     LDASRCFRIGRSCDIV"
     gene            complement(19169..20410)
                     /locus_tag="MOX77_001262"
                     /pseudo
     CDS             complement(19169..20410)
                     /locus_tag="MOX77_001262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462892.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="STM4012 family radical SAM protein"
     gene            complement(20412..21287)
                     /locus_tag="MOX77_001263"
     CDS             complement(20412..21287)
                     /locus_tag="MOX77_001263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462893.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="STM4013/SEN3800 family hydrolase"
                     /protein_id="HCA3356851.1"
                     /translation="MYNSMDEVPVSLHASIDTGDGEFDMNALISNNAHILFIVLDSLR
                     YDIALQEQTAGNTPNLNHYGQWTKCEAAGNFTWPSHHAMFSGFMPKPIDDTVNQTMLL
                     FPKDIGLGRKGPKNAFAFDDATWIKSLENKGYQTICIGGVSFFNNRSGMGKVFPSMFK
                     ESYWHPRFACTVKESMDNQIHYIQKIMAERAGSQPVMMYINIDTIHYPNHFYVEGAAP
                     GDTVETHAAALRYIDARIDGLLNIFRQTGGETFVIVCSDHGTCYGEDGKYFHSFNHPI
                     VNTVPYMHFLLSGNH"
     gene            complement(21280..22305)
                     /locus_tag="MOX77_001264"
                     /pseudo
     CDS             complement(21280..22305)
                     /locus_tag="MOX77_001264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462894.3"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="STM4014 family protein"
     gene            complement(22318..23166)
                     /locus_tag="MOX77_001265"
     CDS             complement(22318..23166)
                     /locus_tag="MOX77_001265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="STM4015 family protein"
                     /protein_id="HCA3356852.1"
                     /translation="MNKRFNIDWDNELTQEQLINLILTDEDLPKLRSLTIGNWGDCWE
                     DETCQPIIDMIVENAPRFSHLESLFIGDMESEDCEISWIKQGDYSRLYAALPNLKELI
                     IKGASDLRLGAIHHEKLEHLEIISGGIPSNVLAELQNAQLPALKTLKLFLGVEEYGFD
                     GSLDNVMALVSKDLFPQLNHLGLMNSEEQDDIARRVLESNILPQLNVLELSCGTLTDS
                     GAEALLEHKDRIAHLETLDLHHHYLTPEMQEKLKAALPIPLNLSEALEPDDYDGDIYM
                     NAMYTE"
     gene            complement(23323..24015)
                     /gene="ompL"
                     /locus_tag="MOX77_001266"
     CDS             complement(23323..24015)
                     /gene="ompL"
                     /locus_tag="MOX77_001266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin OmpL"
                     /protein_id="HCA3356853.1"
                     /translation="MKSLNTLVILTSVISTSVFAGAYVENREAYNLASDQMEFMLRVG
                     YNSDMGAGIMLTNTYTLQRDDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGS
                     GGAVYLDINYKFTPWFNLTVRNRYNHNNYSSTDLNGELDNNDSYEIGNYWNFIITDKF
                     SYTFEPHYFYNVNDFNSSNGTKHHWEITNTFRYRINEHWLPYFELRWLDRNVGLYHRE
                     QNQIRIGAKYFF"
     gene            complement(24083..25504)
                     /locus_tag="MOX77_001267"
     CDS             complement(24083..25504)
                     /locus_tag="MOX77_001267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3356854.1"
                     /translation="MSNHDPLTLKLSLREKCAYGVGDFGSNLMLCIGTLYLLKFYTDE
                     LGMPAYYGGIIFLVAKFFTAFTDMLTGVLLDSRRNIGAKGKFRPFILYASFPVALVAT
                     AQFFATHFTLPVKTAFATVLFMLFGLFYSLMNCSYGAMVPAITKNPHERAQLAAWRQG
                     GATIGLLLCTVGFMPIQALFTRSPSLGYLVAAVIFSVCGLFSMWWCFSGVKERYIETV
                     PDTHKPSILKSFCAIFRNPPLLVLCVANLCTLAAFNIKLAIQVYYTQYVLNDIHLLSW
                     MGFFSMGCILIGVLLVPDAVKRFGKKQVYLGGLILWAVGDILNFIWGGTSFLFVIFSC
                     IAFFGTAFVNSLNWALVPDTVDYGEWKTGIRAEGSVYTGYTFSRKISAALAGFLPGIM
                     LTQIGYIPNIAQSDTTLLGLRQLIFLWPCGLAIIAALTMGFFYKLNEQRFAFIIEEIA
                     QRKKTGNQIVATNNKQSISTVNN"
     gene            complement(25550..26932)
                     /locus_tag="MOX77_001268"
     CDS             complement(25550..26932)
                     /locus_tag="MOX77_001268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3356855.1"
                     /translation="MSQTSSNPATIRLPFKEKLAYGLGDLGSNILLDIGTLYLLKFYT
                     DVLGLPGTYGGIIFLIAKFFTAFTDMGTGIMLDSRRKIGPKGKFRPFVLYAAFPVTLL
                     AIANFVGTPFEVTGKTVVATMLFMLYGLVFSMMNCSYGAMVPAITKNPDERASLAAWR
                     QGGATLGLLLCTVGFVPVMNLIEGNAQLSYIFAATLFSLFGLLFMWLCYAGVKERYVE
                     VKPVDSAQKPGLLQSFRAIAGNRPLFILCIANLCTLGAFNVKLAIQVYYTQYVLNDPI
                     LLSWMGFFSMGCIFIGVFLMPGAVRRFGKKKVYIGGLLIWVAGDLLNYFFGGGSVSFV
                     AFSCLAFFGSAFVNSLNWALVSDTVEYGEWRTGVRSEGTVYTGFTFFRKVSQALAGFF
                     PGWMLTQIGYIPNVVQSAGTVEGLRQLIFIYPCVLAVITIIAMGCFYNLNEKMYVRIV
                     EEIEARKHTV"
     gene            complement(26978..29014)
                     /locus_tag="MOX77_001269"
     CDS             complement(26978..29014)
                     /locus_tag="MOX77_001269"
                     /EC_number="3.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucosidase"
                     /protein_id="HCA3356856.1"
                     /translation="MNSLPQRSTDFELTTSQDGFALSWQQRLILRHSAENPCLWIGAG
                     VADIDMFRGNFSIKDKLNEKIALTEATVSELPDGWLVQFSRGATISATLRISADEAGR
                     LTLDLQNDDLHHNRIWLRLAANPDDHIYGCGEQFSYFDLRGKPFPLWTSEQGVGRNKT
                     SYVTWQADCKENAGGDYYWTFFPQPTFVSTQKYYCHVDNSCYMNFDFSAPEYHELALW
                     EDKTTLRFECADTYIALLEKLTALLGRQPELPDWVYDGVTLGIQGGTEVCQQKLDTMR
                     NAGVKVNGIWAQDWSGIRMTSFGKRVMWNWKWNSDNYPQLDSRIKQWKEEGVQFLSYI
                     NPYVASDKDLCAEAARHGYLAKDATGGDYLVEFGEFYGGVVDLTNPEAYDWFKDVIKK
                     NMIALGCSGWMADFGEYLPTDTYLHNGVSAEIMHNAWPALWAKCNYEALQETGKLGEI
                     LFFMRAGYTGSQKYSTMMWAGDQNVDWSLDDGLASVVPAALSLAMTGHGLHHSDIGGY
                     TTLFDMKRSKELLLRWCDFSAFTPMMRTHEGNRPGNNWQFDGDAETIAHFARMTTVFT
                     TLKPYLKQAVAQNAATGLPVMRPLFLHYENDAATYTLKYQYLLGQDLLVAPVHEQGRC
                     DWTLYLPEDHWVNIWTGEAHHGGEITVDAPIGKPPVFYRAKSEWALLFASLRNI"
     gene            complement(29058..29914)
                     /locus_tag="MOX77_001270"
                     /pseudo
     CDS             complement(29058..29914)
                     /locus_tag="MOX77_001270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462900.3"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aldose-1-epimerase"
     gene            complement(30023..31159)
                     /gene="yihS"
                     /locus_tag="MOX77_001271"
     CDS             complement(30023..31159)
                     /gene="yihS"
                     /locus_tag="MOX77_001271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015606244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfoquinovose isomerase"
                     /protein_id="HCA3356857.1"
                     /translation="MKWFNTLSHNRWLEQETDRIFNFGKNAAVPTGFGWLGNKGQIKE
                     EMGTHLWITARMLHVYSVAASMGRPGAYDLVDHGIKALNGALRDKKYGGWYACVNDQG
                     VVDASKQGYQHFFALLGAASAVTTGHPEARKLLDYTIEVIEKYFWSEEEQMCLESWDE
                     AFSQTEDYRGGNANMHAVEAFLIVYDVTHDKKWLDRAIRIASVIIHDVARNNHYRVNE
                     HFDSQWNPIRDYNKDNPAHRFRAYGGTPGHWIEWGRLMLHLHAALEARFETPPAWLLE
                     DAKGLFHATIRDAWAPDGADGFVYSVDWDGKPIVRERVRWPIVEAMGTAYALYTLTGD
                     SQYEEWYQKWWDYCIKYLMDYENGSWWQELDADNKVTTKVWDGK"
     gene            complement(31175..32053)
                     /gene="yihT"
                     /locus_tag="MOX77_001272"
     CDS             complement(31175..32053)
                     /gene="yihT"
                     /locus_tag="MOX77_001272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfofructosephosphate aldolase"
                     /protein_id="HCA3356858.1"
                     /translation="MNNYTIKDITRASGGFAMLAVDQREAMRLMFAAAGAKTPVADSV
                     LTDFKVNAAKILSPYASAVLLDQQFCYRQAVEQNAVAKSCAMIVAADDFIPGNGIPVD
                     NVVIDKKINAQAVKRDGAKALKLLVLWRSDEDAQQRLDMVKEFNELCHSNGLLSIIEP
                     VVRPPRCGDKFDREQAIIDAAKELGDSGADLYKVEMPLYGKGARSDLLTASQRLNGHI
                     NMPWVILSSGVDEKLFPRAVRVAMEAGASGFLAGRAVWSSVIGLPDTELMLRDVSAPK
                     LQRLGEIVDEMMAKRR"
     gene            complement(32076..32972)
                     /gene="yihU"
                     /locus_tag="MOX77_001273"
     CDS             complement(32076..32972)
                     /gene="yihU"
                     /locus_tag="MOX77_001273"
                     /EC_number="1.1.1.373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfolactaldehyde 3-reductase"
                     /protein_id="HCA3356859.1"
                     /translation="MAVIAFIGLGQMGSPMASNLLKQGHQLSVFDINPDAVQRLVDKG
                     AQPASSPAQTTIGAEFVITMLPNGDLVRSVLFGEQGVCETLSREALVIDMSTIHPLQT
                     DKLIADMQSKGFSMMDVPVGRTSDNAITGTLLLLAGGTTEQVERATPVLMAMGNELVN
                     TGGPGMGIRVKLINNYMSIALNALSAEAAVLCEALGLSFDVALKVMSGTAAGKGHFTT
                     TWPNKVMKGDLSPAFMIDLAHKDLGIALDVANQLHVPMPLGAASREVYNLARAAGRGR
                     EDWSAILEQVRISAGLTANVKK"
BASE COUNT         8269 a         8417 c         8628 g         7930 t
ORIGIN      
        1 aggaacgtgc tttctctaac caccgcaaaa tgaaggcaga aatctgcgat acatcattaa
       61 gatccaaaac gggtaccgct acggcaagtg gaatatcact ggcaaccgca ataacatgct
      121 catcaagaat taattcttcc tcgctgtgcc cacatccctg acgaaaaagt aagatcttcg
      181 caactgcttc gtgtttaaac ccttcaacaa gcaccagatc cagttttgat gcatccatcc
      241 ggctcaccag ccatgccaga tccaactctt cttgccccgg cgtttccgtc attaacgccc
      301 agcgctgctg actggcaacc agcgtctgtg ccgccccggc tttacgcagc tcgtagctat
      361 ctttacccgg tttatcgaca tccatatcat gatgggtatg cttaatcagc cctggccgaa
      421 taccgtgcgc acaaagtgct gggatcagtt ttttcagcag tgttgttttt cccgtgccgc
      481 tccatgcggc aatggcgagt agcggtatca tggtctcttt tgccattgcg cgagttcctc
      541 cggcgtgttg acgttcacaa atgcctcctt acaatcgctg aaatcaacgg cgtgtccgcc
      601 tacctggcgc ataaaaatca ttacccgccg ctcgcctgct tgcaaataag ctgtcaactg
      661 gggctcaacg gcacgattaa tcaacgcgat cgttggatga tcgcgttctc catcatgaac
      721 ccaaaccacg ggtgcgccat gacgatgcgc tgctaaacga tcgaccaggt tgtgggggat
      781 acaaggattg tcacagggac aaaacagaaa ccagtcgcct gctacctgct gaaaaacgga
      841 aagcataccc gccagcggac cgggaaagtc agcgattgaa tccggaatga ctttcaggcc
      901 gctggcctgg tagatatcca gatggcgatt agcactaatt acgaccgtag caagttgtgg
      961 cgcgagcgcg tcggcaacgt gtcgccagag cggtttcccg tccagttcaa gcagaccttt
     1021 atccgcacct cccatccgcc gggctttacc gcctgccagt accacgccgg ttattacttc
     1081 atccagattc accgatatcg cctcttttat tgtgggattg accctgctac cgtgtctgta
     1141 tcaagaataa ggagcacagc tatgaaatgt aaacgcctga atgaagtcat tgaactcctc
     1201 cagccagcct ggcagaaaga gcctgatctt aatctgacgc aatttttgca gaaactggcg
     1261 aaagagtcag gttttgacgg caaactggaa gatttaactg atgatatcct gatctaccat
     1321 ctgaaaatgc gcgattccgc caaagacgcc gccattccag ggattcaaaa agactatgaa
     1381 gaggacttta aaacggcgct tttacgcgcc cgcggcgtta ttaaagagta aaaccttgta
     1441 agcggcacca ccgaaatcgc cacgaaatga tatcctgaat cattcgtagt attttccgga
     1501 tgatgggatg aacgacaacg cttttacttt ccagacgcta cacccggaaa ccatcatgga
     1561 tgcgctgttt gaacagggga tcagggtgga ttccgggctg actccactaa acagttatga
     1621 aaaccgcgtc tatcagtttc aggatgaaga ccgtcgacgt tttgtcgtta agttttatcg
     1681 tcctgaacgc tggtctgttg atcaaattcg ggaagaacac caattcgcgc ttgaactggt
     1741 gaaggatgag gttccggttg ctgctccgct cgcgtttaat ggccagacgc tgttagcgca
     1801 tcagggctat cattatgcca ttttccccag cgtaggcggt cgtcagtttg aagcagacaa
     1861 tatcgatcag atggaggcgg tagggcgtta tcttggccga ttgcatcaga cggggcgaaa
     1921 acgtcctttc actttccggc ctgacattgg gcttgcagag tatctttttg aacctcgcca
     1981 ggtattcgaa gatgccgcac tgattccctc cgggcaaaaa gcggctttcc tgaaagccac
     2041 tgatactcta ctgtctgcgg ttaccgaatg ctggcgcacc gatttcgcca cgctgcgatt
     2101 gcacggcgat tgtcatgccg gcaacattct atggcgtgat ggaccgctgt ttgtcgattt
     2161 agatgatgcc cgtaacggcc cggcgataca ggatttatgg atgctgctga acggcaacaa
     2221 agccgaacag cgaatgcagc ttgaaaccat tattgaagct tatgaagaag ttagtgagtt
     2281 cgatacggct gaaattggtc tcattgaacc tttacgcgcc atgcgtttag tttattatct
     2341 tgcctggttg attcgtcgtt ggggcgatcc tgcgtttcca aaaaactttc cctggttaac
     2401 aggggaagat tactggcagc gacagacaac gacttttatt gagcagacta aaattttgca
     2461 cgaaccccct ttacaattaa cgccaatgta ttaatcggag agagttgatc atgaaaaaga
     2521 tttggctggc gctggctggt atggttttag cttttagcgc ctcggcagca cagatcagcg
     2581 acggtaaaca gtatatcacg ctggataaac cggtcgctgg cgaaccccag gtactggagt
     2641 ttttctcatt ctactgccca cattgttatc agtttgaaga agtgcttcat gtgtctgaca
     2701 atgtgaagaa aaagctgccg aaaggcacca agatgaccaa gtaccacgtt gagttcctgg
     2761 ggccgttggg caaggagctc acccaggcat gggcggtggc gatggcgttg ggggtagaag
     2821 ataaagtcac ggtcccgctg tttgaagccg tacagaaaac ccagacagta caatctgccg
     2881 cggatatccg taaagtgttc gttgatgcgg gcgtaaaagg cgaagattac gatgcggcat
     2941 ggaacagctt cgtggtgaaa tcactggttg cgcaacagga gaaagccgcg gctgacctgc
     3001 aactgcaggg cgttccggcg atgttcgtca atggcaaata ccagattaac ccacaaggca
     3061 tggataccag cagcatggat gtttttgttc agcagtatgc tgataccgtg aaatatttgg
     3121 ttgataaaaa ataaaaagaa cgccggtcac tgaccggcgt ttttataaga tgttttaatc
     3181 tcttctatct gtatatcttt cttatcccac agcgtattaa gccaacgttg aaaacggcgt
     3241 ttgaatgttt tgtcgttcac gtaatcgccg tgcagttctt catttatggg ttccagttgc
     3301 acccgaacaa caatacgcgt cagcctaccg cttagcatat cgtagaaggg gtggcgatcg
     3361 ttgtttgggt aacacaacgt aatattaagc agcttatcga actgtgagcc taaaacatta
     3421 atcgccattg caataccggc tgcttttggt ggcaacagat gttgataggg tgaatgcgtt
     3481 tgctgacgtt tctcatgcgt aaatcgcgag ccttcaacaa agttaacgat agtggtggga
     3541 taccgacgaa acttctcgca agagcggcga gttgtttcaa catctttgcc acgtcgatcg
     3601 gggtggcgga gcagatagct acgagagtag cgcttcataa acggcatatc taatgcccag
     3661 cacgccaggc cgatgaacgg cacccaggcc aattgctgtt taagaaagta cttattcatt
     3721 gggatatgct tgcggaacag aacgcaaagc acaacgatat cggcccagct gcggtgatta
     3781 caaatcagta aataccaatt tttcttgctc agcccttcta acccttctac atcccattgc
     3841 aagtgcggat taaggcgtaa cagcgctgca agaccagcac accagcaata catcatgaaa
     3901 ttgcagaaaa tggagacctt gcgccagata ccgggaacag gcaaaaggag ctttaccatg
     3961 ccggcaacga tgatcggtac tgagcaaaca atagtgacca ggatggttaa tacgatactc
     4021 aatgggagcg tgatagccgc gagtattctc gtcataataa attattcaaa agttagccat
     4081 aaacggtgtg cgaaaagggc gcaagaggct gattctatca gaaaacgatg ctaatgatgg
     4141 cgctgagtga aatagaaaca ctcgtaacaa ctatccacat tatgataacg gcatgaatca
     4201 gataatcaga aaatcgtgat gttaacaact cattgaaaat aatgggtaat tattaagagg
     4261 agaaggctat cgcgctgatt ttaaagtaat ggtaagaatt tacacacaaa gttatccaca
     4321 ggttgttttg cgagcgatcc tgaagatcga caaaactttt ccgcaaatgc ggcgaaaaac
     4381 tcaagttttc ctcctgtatg tggcatcctt taaccataat ctgttaaaca ggcacggaca
     4441 ttatggttca gatcccagaa aacccactta ttctcgtaga tggctcatcc tatctctatc
     4501 gcgcctatca tgcgtttccg ccgttaacca acagcgcggg agaacctacg ggcgcaatgt
     4561 atggtgtcct caacatgttg cgcagcctga tcatgcagta tcagccgacg catgctgcgg
     4621 tggtgtttga cgccaaagga aaaaccttcc gtgacgagct ctttgaacac tacaaatcgc
     4681 atcgtcctcc gatgccggat gatctgcgtg cgcaaataga gccgttacat gccatagtta
     4741 aagccatggg gttacctctg ctggcggtct ctggcgtaga agcggatgac gttatcggta
     4801 cactggcgcg agaagcggag aaggtggggc gtccggtatt aatcagcacc ggcgataaag
     4861 atatggcaca gttggtgacg cagaatatta cgctgatcaa caccatgact aacaccatcc
     4921 tcggcccgga tgaagtcgtt aataagtacg gtgtgccgcc tgagctgatt attgactttc
     4981 tggcgctgat gggggactcc tcggataata ttccgggcgt accaggcgtg ggtgagaaga
     5041 cggcgcaagc cttgcttcag ggattgggcg gcctggatac gctgtacgcc gagccggaaa
     5101 aaattgccgg tctcactttc cgcggcgcca aaacgatggc cggtaaatta gcgcagaata
     5161 aagacgtagc gtacctgtct tataagctcg ccaccattaa aacggatgtt gagctggagc
     5221 tgacctgcga acagcttgaa gtgcagcagc cgattgcgga tgaactgctg ggcctgttta
     5281 aaaaatatga gttcaagcgc tggacggcgg acgtcgaggc aggcaagtgg ctacaggcaa
     5341 agggcgcgaa accggcggcc aaaccgcagg aaacggtcgt tattgatgaa tcgcccagcg
     5401 aaccggcagc ggcgctctct tatgaaaatt atgtcacgat tctggatgac gttacgctgg
     5461 aaagctggat tgaaaagctg aaaaaagcgc cagtttttgc tttcgacacg gagaccgaca
     5521 gcctggataa tatcgccgcc aacctggtgg gcctctcgtt tgccatcgaa cctggcgttg
     5581 ccgcgtatgt acctgtcgcg catgattatc tggacgctcc ggatcaaatc tcccgccagc
     5641 gtgctctgga actgctgaag cctctgctgg aagatgaaaa agtgcgcaaa gtggggcaaa
     5701 acctcaagta cgatcgcggc gtcttgcaaa attacggtat tgagctgcgc ggtatcgcct
     5761 tcgataccat gcttgagtct tacattctga acagcgtcgc cggacgccat gatatggaca
     5821 gcttgtccga tcgttggctg aagcacaaaa ctatcacctt tgaagacatt gccggtaaag
     5881 gtaaaaacca gctcaccttt aaccagatcg cactggagga agcggggcgc tatgcggcag
     5941 aagatgcgga tgtcacgtta cagttgcatc tcaaaatgtg gcctgagctc cagcagcaca
     6001 aaggcccgct gaatgttttc gaaaacatcg aaatgccgct ggtgccggta ctgtcacgcg
     6061 ttgagcgcaa tggcgtaaaa atcgatcctg ccgtcctgca caaacattcg gaagaaatca
     6121 cgctacgtct ggcggaactg gaaaagaaag cgcatgacat tgcgggcgag gcgttcaacc
     6181 tgtcctcgac gaagcagttg cagaccatcc tgtttgaaaa gcagggtatt aagccgttga
     6241 agaaaacgcc tggcggcgcg ccgtcaacgt cggaagaggt gctggaagag ctggcgctgg
     6301 actatccgct gccgaaagtg attctggagt atcgtggtct ggcgaagcta aaatccacct
     6361 ataccgataa gctgccgctg atgattaacc cgaaaaccgg gcgcgtccat acgtcctatc
     6421 atcaggcggt aacggcgacg ggacgtttat cgtccaccga tccgaacctg caaaatattc
     6481 cggtgcgcaa tgaagaaggc cgccgcattc gtcaggcatt tattgcgcct gaggattatc
     6541 tcatcgtatc tgcggactat tcacagattg agctgcgtat tatggcgcat ctttcccgtg
     6601 ataaagggct gctcacggcg ttcgccgaag ggaaagatat tcaccgcgca acggcggcgg
     6661 aagtctttgg cttgccgctg gatagcgtga ccggggaaca gcgccgaagt gcgaaagcca
     6721 ttaactttgg cctgatttac gggatgagcg ccttcggtct ttctcgccag cttaatattc
     6781 cgcgtaaaga ggcgcagaag tatatggatc tctacttcga acgctaccct ggcgtgctgg
     6841 aatatatgga gcgcacccgc gctcaggcaa aagaacaagg ctatgtggaa actctggagg
     6901 ggcgccgcct ttacctgccg gatattaaat ccagcaacgc ggcgcggcgc gcgggggcgg
     6961 aacgcgcggc gatcaatgct cccatgcaag gaacggctgc cgatatcatc aagcgcgcca
     7021 tgattgccgt cgatgcctgg ctacaggccg agcagccacg cgtgcggatg attatgcagg
     7081 tacacgatga attagtgttc gaggtgcata aagacgactt agatgcggta gcaaaacgta
     7141 tccatcagtt gatggaaaac tgcacgcgta ttgatgtgcc gttgctggtg gaagtcggta
     7201 gcggagaaaa ttgggatcaa gcgcactaag catttaagga ataacgcgct tttttcgtaa
     7261 ttaagcaaca taagcacggg ggttttgtga tgggtattag aattccctat gtaaagaatg
     7321 aaaaaaaaat tacgaaaagg tctttctgtg ttgctcaaaa aagagtaaag ttattcacgt
     7381 agggtacaga ggtaagatgt tctatctttc agacctttta cttcacgtaa tcggatttgg
     7441 ctgaatattt tagccgcccc agtcagttta tgactggggc gttttttatt gggcgtaaga
     7501 aaagtttcgc tcgcaccgta ggccggataa gacgcgcagc ggcgccatcc ggcatagcgg
     7561 gtgattattc cccgtcctga atctcttcga ccggtgccag ttcactaaac cagctatcca
     7621 gtttctgacg taacttatcc actccctgct ttttcagcga ggaaaacgct tctacctgca
     7681 catcgccatt aaaagccagc acggcttcac gtaccatatt caactgcgcc ttgcgcgcgc
     7741 cgctggccag tttgtccgct ttggtcagca gaaccagaac ctggatattg ctctctacag
     7801 cccactggat catctgttgg tcgaggtctt tcaacggatg gcggatatcc attaaaacga
     7861 ctaagccctg taggctttga cgtttctcca gatattcccc cagcgcgcgt tgccacttgc
     7921 gtttcatctc ttccgggact tccgcgtagc catagcccgg caggtcgacc aaccgtttgc
     7981 catctacgac ttcaaacagg ttaatcaatt gggtacggcc cggcgtttta gaggtgcgcg
     8041 ccaggctttt ttggttggtc aacgtgttca gggcgctgga tttgcctgca ttggaacggc
     8101 cagcaaaagc cacttcaatt ccgcaatcgg aaggtaaatg gcgaatatca ggcgcactca
     8161 tcacaaaatg cgtctgttga taattcaggt tagtcaaagc ggtcgtctcc gtcagtcaaa
     8221 gcattgtggc gattatacct gaacgccagc aaaagacgga tttttcggcg cgtcggtgct
     8281 gtaagcaaaa gccatacgct ttgtgagaca ttgtccattg cacttatgcg acatgacaga
     8341 gtcgttgtca ggctaaaagc cagttaatat agttaaatca tgaatttata gaaaggtaat
     8401 tgtctgaaaa aaagggattt gccgtgtcgg tatcttgtga gtttacccca aaagagtaaa
     8461 gtaatgcaca tagcgaggac gctaacagga tcaacgactc aggatgaggg tcaggagcgc
     8521 caggaggcga agacacagga ttgtcaggaa gacaaacgtc cggagacgtt agtaaaagga
     8581 aatggaaaca acatggaatg ttccaggcta agggaaaaac agggcgtgtt gatagccaac
     8641 agggatggtg gaacccgtta agggtcgtga gtcaagaaaa aaggcggcag attactctgt
     8701 cgcctttttt ctttgcttgc tttctgctag attccgcctc aattctatac tgaataaaac
     8761 ggcttaaaga tctgacatca tgaaaaaacc aacctctgca ccgcgcagta aagcctttgg
     8821 caaacagcgt cgtaaaacgc gtgaagagtt aaaccaggag gcgcgcgacc gtaaacgcct
     8881 gaaaaaacat cgcggccatg cgccgggaag tcgcgcggcg ggcggcaatt ccgcttcggg
     8941 cggcggcaat cagaatcaac aaaaagatcc acgtattggc agtaaaacac ctgttccatt
     9001 gggcgtgact gaaaaagtga cccaacagca taaaccgaaa agtgagaaac ctatgctttc
     9061 accgcaggcg gagttggatt tactggaaac ggatgagcgc ctggatgcgc tgttagaacg
     9121 tctggaagcg ggcgaaaccc tgagtgcgga agatcaagcc tgggtagatg ccaaactgga
     9181 tcgtattgat gaactgatgc agaagcttgg tctgtcttac gatgacgacg aagaagacga
     9241 cgaagaggac gagaagcagg aagatatgat gcgcctgcta agaggcggca actaacgggt
     9301 ttacaccgtg ggcttgcccg tcctgcttat aacccttccg gttatatgtt atctggtgtg
     9361 gttattcgtt aaactacagc gattgtcgcg gcgacagaaa tggctgcgca gccggcttgc
     9421 cgcccgtcat ggcgtgaagc cggtacgccg tacccgccag agacgccatc ggaaggagtg
     9481 agcatgtctg aacagcaaat agactgggat ctggccctga tccagaaata taactattcc
     9541 gggccacgat atacctcgta cccaaccgcg ctggagtttt ctgaagactt cgaggacgcc
     9601 gcattcttgc aggctgtggc gcgttatcct gaacgtccgc tctcgctgta tgtgcatatc
     9661 ccgttttgtc acaagttgtg ttatttctgc ggctgcaaca agattgtcac ccgccaacag
     9721 cataaagctg accagtatct tgacgcgctt gagcaggaaa ttcgccatcg cgcgccgctg
     9781 tttgcagacc gtcatgtcag ccagcttcac tggggcggcg gtacgcctac ttacctgaat
     9841 aaagcgcaaa tcagccgctt aatgacgctg ttgcgtgaaa atttccactt taataccgac
     9901 gcggaaatct cgatcgaagt cgatccccgt gaaattgagc tggatgtgct cgatcattta
     9961 cgtgcggaag gttttaaccg cctgagtatg ggcgtgcagg actttaataa agaggtgcag
    10021 cgcctggtta accgcgagca ggatgaagaa ttcatctttg cgttgcttaa tcacgcccgc
    10081 gatatcggct ttacctcgac caatatcgac ttgatctacg gtctaccgaa acagacgccg
    10141 gaaagcttcg ctttcacgct gaagcgtgtg acggaactga accccgatcg tttgagcgtc
    10201 tttaactatg cgcatctgcc aacgcttttt gccgcccagc gtaaaattaa agatgccgat
    10261 ttacccagcg cgcagcagaa actggatatt ttgcaggaga cgatcgtatc gcttactcag
    10321 gccggttatc agtttatcgg gatggaccat tttgcccgtc cggatgacga actggccgtc
    10381 gcgcagcgcg aaggcgtgct gcaccgtaat tttcagggct atacgaccca gggcgatacc
    10441 gatctgctgg ggatgggcgt ttctgctatc agcatgattg gcgatggcta catgcagaac
    10501 cagaaagagc tgaagcgtta ttaccagcaa gtggatgagc ggggcaatgc gctatggcgt
    10561 ggtattacgc tgacccgtga tgattgcatt cgtcgcgatg ttatcaaggc gctgatttgt
    10621 aacttccgcc tggattttaa cgctgtcgaa cagcagtggg gtttgcattt cgctgaatat
    10681 tttgccgaag atttgcagtt actgtcgccg ctggcgaaag atgggctggt ggatattagc
    10741 gagaagggaa ttcaggtgac ggcgaaaggt cgtttgctga tccgcaatat ctgcatgtgc
    10801 tttgacgcgt atctgcgcca gaaagcgcgg atgcagcagt tctcgcgcgt catttagccg
    10861 ggttgcccgg tggcgctgcg cttaccgggc ctacacgttg cgacaacctg taggccggat
    10921 aagcattagc gccatccggc acattgtcag ctgaacagtc ccaccagcgc ggcacacaac
    10981 acggcggcta gcgcagtttg tggcgtgtgg ctgtcgaccg ctccactcga taccagatta
    11041 ataatagatt ctaacataat gaatcccccc gtttgccggg catgatcata ctgaactcat
    11101 cggaacagta aagcgcaaaa tagcagcgtt ttgcgctcaa ttattaatct ttacactcgc
    11161 ggataatgtt tactccattc ccagctcttt caacttccgc gttagggtgt ttcgacccca
    11221 accgagcagc ttggcggctt cctgtttatg accctgcgta tggcgtaacg ccgtggtcag
    11281 tagcgttctt tccagttctg gctgcgcttc agaaagcagg ttttgatgac cggatcgcaa
    11341 ggcgcgatcc gcccattgcg ccagtaatgt agcccagcta tccggcggca ggtgggacgg
    11401 gctatccggc gccgaggctt caaacagttc gcccggtaaa tcctgggtca atacctcctg
    11461 tccggcggcc atgacggtga gccagcggca ggtattttct aactgacgca cgttaccagg
    11521 ccatgccagg cgcgttaacg ccgtttcggt ttccggatgt aataatttgg cttccacgcc
    11581 taattcacgg gcggcgacct gcaaaaaatg gcgcgccagg cgcggaatat cctcacggcg
    11641 ctcgcgcaac ggcgggagat ggatacgaat cacgttcagg cggtggaaca ggtcttcacg
    11701 gaatttccct tcctgaacgc gtcgttcgag gttctggtgg gtggcggcaa taatgcgcac
    11761 atccactttt accggcgcgt acccgcccac acggtagaac tgtccgtcag ccagcacgcg
    11821 taacagacga gtctggacat ccagcggcat atcgccaatt tcgtccagaa acagcgtacc
    11881 gccgtcagcc tgctcgaaac ggccctgccg gatggtattc gccccggtaa aagcgccttt
    11941 ctcatggcca aacaattcgg attcaatcaa atctttcggg atggccgcca tattgagcgc
    12001 gataaacggc gctttggcgc gtgggctatg gcgatgtagc gcatgggcga ccagttcttt
    12061 accggttcct gattcgccgt taatcagcac gctaatcgaa gaacgcgaca gccgaccaat
    12121 aatgcgaaac acatcctgca tggcgggcgc ttcgcctatc atgtctgttg tcgggccgtt
    12181 aacctcgata ttacgcggct gctgctgctc ctgatagtgg ctaatcgctc gctcgaccag
    12241 agcgacggct tcatcaatat caaacggttt aggcagataa tcaaacgccc cctgctgata
    12301 agcgctcacg gcggcatcta aatcggaatg cgcggtcata atgatgaccg gaagcatcgg
    12361 atgacgttgt ttaatctgct ttaatagcgc cagcccgtcc attcctggca ttcggatatc
    12421 cgacagcaag acgtccggcg ttttactggc cagcgcagcc agtacttcat taccattctc
    12481 aaaggtgata caggtcaacc ctgccccggc gagagcacgt tcaagcaccc aacggatgga
    12541 actatcatca tcgacgaccc agactattcc tcgttgcata aacacctcta tttccgaatc
    12601 ggcaggtaaa ccgaaaactc ggtatgcccc ggccaactgg taaattcaat tttgccggcg
    12661 tgttgatcga taagattgcg ggcgatagat aacccaagcc cggtgccgcc ttcgcgaccg
    12721 ctgaccatcg ggtagaacag cgtatcctgt aaatggggag gaatgcccgg cccattgtct
    12781 tcaacgtcta tacgcgccgc caggcgatag cgttcgccat gcagcgttaa ctggaaggcg
    12841 gtacgggtac gcagcgtaat ttcgccgcct tccggcccca gcgcctgcaa ggcattgcgg
    12901 acaatattca gcagtacttg ctcaatttgt tccgggtcgt gcggcagttc tggcagactg
    12961 gggtcgtaat cgcggataag ccggacatta tccggcagtt ccatcgacac cagcgccacc
    13021 acgcgctccg cgactttatg tatgctctcg gtaatgtgca ttcccgggtg ctgcggcccc
    13081 agcaaacgat cgacaaggtt gcgtagcctg tcggcctgtt caatgatgac tttggtatat
    13141 tccgttagcg ccgggtcggg cagcgccttg ctgagtagct gcgccgcgcc gcgcaggccg
    13201 ccgagcggat ttttgatttc gtgcgccaga ccgcgcacca gatcgcgggc ggcgatttgc
    13261 tgcgcgtgct gcaactgctc ctgactcaga cgacgctggt tatccatcgg cgccatttcg
    13321 agcagtataa aatcgtcggg cagacgttgg gcggtcaaag agagaatatg cgagcgacta
    13381 tcaatcacca gcgtcacttc gttatcggta aagccttgtc ctgccgctaa actttcgcgc
    13441 atcaggtcaa tgtttaacga aaaatagctc aacagttcag gtaacggcgt cccgaacagt
    13501 ttgcgtgagc tttgcgcgag caactgctgc gcggcagggt tggcgtaatg gattgccagc
    13561 gcgtcgtcga ccaccagcac gctgttgatt aacgaattga ggatctgccc agcatcgggc
    13621 tgtatgccgc ttgccattca gcagtctcct ggaaaaggtt gcaccatttt agtgcattat
    13681 agctttttac cactaaaaag cgcgtgagat cagattgttg gtggagaaaa aagcccatcc
    13741 tgggatgggc tgaaagtttc cacggcaact caaaaactcc tgacgccttt cacgctgctg
    13801 ctgcgttggc tgccttcgct taccccggtc acatcgctat ctatgctccc ggggatgtgc
    13861 tcagttgccg ccttgcagca acgcgaaatt cgtcggattt ttaatatacg attaaacgct
    13921 gtagtacagc tcaaactcta ccgggtgcgg ggtcatacgc acgcggtcat cttcttcgcg
    13981 acgcagcgca atatacgcat cgatcgcttc atccgtgaac acgccgcctg ctttcaggaa
    14041 ctcgcggtcc aggtccagcg cgttcagcgc ttcttccaga gaacctgcta cctgtgggat
    14101 ctctttcgct tcttccggcg gcaggtcata caggtttttg tccatggctt cgcccgggtg
    14161 aatcttattc ttaatcccgt ccagaccggc catcagcagg gcggcaaagc acagatacgg
    14221 gttagccgcc gggtccggga agcgaacttc gatacggcgc gctttcggag acgccaccac
    14281 cggaatacgg atggaggcgg aacggttacg ggcggagtag gccagcatca ccggcgcttc
    14341 gtaacccggg accagacgct tgtaggagtt ggtggtcggg ttcgccaggg cgttgatggc
    14401 tttggcgtgt ttgatgacgc cgccgatgta gtacagcgcc tgctcagaca gaccggcata
    14461 tttgtcgcca gagaacaggt tggtgccgtt cttcgccagc gacatgtggc agtgcatacc
    14521 ggaaccgtta tcgccgaaca tcggttttgg cataaaggtc gcggtcttac cgaagcggtg
    14581 agccacgtta tgcacgacat atttgtaaat ctgaatttcg tcggcttttt tggtcatggt
    14641 gttaaagcgg gtcgccactt cgttctgacc tgcggtcgct acttcgtggt ggtgcgcttc
    14701 aacaaccagg cccatctgct ccatgaccag acacatttca gaacggatat cctgcgcgga
    14761 gtcaactggc ggaaccggga aataaccgcc tttcacgccc gggcgatggc ctttgttgcc
    14821 gccttcgtat ttggtagagg agttccaggc gccttcaata tcgtcaatcg ccacatgtga
    14881 gccggagata gatgcgccga agcggatgtc gtcgaacagg aagaattcag gttccggccc
    14941 aaacaggacg gtatcggcga taccggtcgc gcgcaggtag tcttccgcac gttttgcgat
    15001 ggaacgtggg tcacggtcat aaccttgcag agtgccaggc tccaggatgt cgcaacggat
    15061 aatcagggta gagtccgcga agaacgggtc gataaccgca gtggacgcat cgggcatcag
    15121 caccatgtcg gattcgttaa tgcctttcca gccgccgata gaggagccgt caaacatttt
    15181 gccttcttca aagaattcgg catttacctg atgagcagga atcgtgacgt gctgttcttt
    15241 gcctttggta tcggtgaagc gcagatcgac aaacttcact tcgtgttcgt tcagcatcgt
    15301 caaaacgtgt tcagcggaca tacttgtact ctcccggatt ggtcatggtc ggtcgtcgtg
    15361 gtaacgagat cttcaattct gctggccgtg tcgccgtaaa aatataaagc gaaatctgtg
    15421 ccaactttca cattgccccc aaaaggcgtt atcatgcgca ccatcgtgca aaagggctgc
    15481 accacggtga ctatgttgca ccaaaatagt gcttcaatgt gaacattaag caccacattg
    15541 gtgcaataga acgcaagcca cccttttaac gctccgtgaa agcgatcaca aagagactct
    15601 gcaatacttg tttgcggagg atgtttgtga tcctgttttg tagtgcgatt aatccgtgta
    15661 caataacgcg ctatttctaa tgcctgaggc aaagttgtga tcgaaaattt gcgtaacatc
    15721 gccatcatcg cgcacgttga ccatggtaaa actaccctgg ttgataagct gctccagcaa
    15781 tccggtacgt tcgacgcgcg tgccgaaact caagagcgag tgatggactc caacgatttg
    15841 gagaaagagc gtggtattac tatcctcgct aaaaacaccg ctattaaatg gaatgattat
    15901 cgtatcaaca tcgttgatac tcccgggcac gctgacttcg gtggtgaagt agagcgcgtc
    15961 atgtccatgg ttgactctgt gctgctggtg gttgacgcat ttgacggccc gatgccgcaa
    16021 acgcgcttcg tgaccaaaaa agcctttgct catggcctga aacccattgt ggttatcaac
    16081 aaggttgacc gtcctggcgc gcgccctgac tgggttgtcg accaggtatt cgacctgttt
    16141 gttaacctcg acgcgaccga cgaacagctg gacttcccga tcatctacgc ttcggcgctg
    16201 aacggtatcg cgggtctgga ccacgaagat atggcggaag acatgacccc gctgtatcag
    16261 gcgatcgttg atcatgttcc ggcgccggac gttgacctcg atggtccgtt gcagatgcag
    16321 atctcccagc tggactacaa caactacgtt ggcgttatcg gcattggccg tatcaaacgc
    16381 ggcaaagtga agccgaacca gcaggtcact atcatcgata gtgaagggaa aacccgtaac
    16441 gcgaaagtag gtaaggtgct gacgcatctg ggtctggagc gtatcgacag cgatatcgcc
    16501 gaagcgggcg atatcattgc gatcaccggt ctgggcgagc tgaacatttc cgacaccatc
    16561 tgcgacccgc agaacgttga agcgctgccg gcgctgtccg ttgatgagcc gaccgtgtct
    16621 atgttcttct gcgttaacac ctcgccgttc tgcggtaaag aaggtaagtt tgtgacttct
    16681 cgtcagattc ttgaccgtct gaacaaagag ctggtgcata acgtggcgct gcgcgttgaa
    16741 gaaaccgaag atgcggatgc gttccgtgta tccggtcgtg gcgaactgca cctgtccgtg
    16801 ctgattgaaa acatgcgtcg tgaaggtttc gaactggcgg tttcccgtcc gaaagttatc
    16861 ttccgtgaaa tcgacggtcg taaacaagag ccgtacgaaa acgtgacgct ggacgtcgaa
    16921 gagcagcacc aggggtctgt catgcaggcg ctgggcgagc gtaaaggcga tctgaaaaac
    16981 atgaatccgg acggtaaagg ccgcgtacgt ctcgactacg tgatcccaag ccgcgggctg
    17041 attggtttcc gttcagaatt catgaccatg acttccggta cgggtctgct gtactccacc
    17101 ttcagccatt acgacgatat tcgtccgggt gaagtgggcc agcgtcagaa cggcgtactg
    17161 atctccaacg gtcagggtaa agcggtggcg tttgcgctgt tcggtttgca ggatcgcggt
    17221 aagctgttcc tgggtcacgg cgcggaagtt tacgaaggcc agattattgg tattcacagt
    17281 cgctccaacg acctgacggt aaactgcctg accggtaaga aactgaccaa catgcgtgcg
    17341 tccggtacgg atgaagcggt gattctggtt ccgccaatta aaatgagtct tgagcaagcg
    17401 ctggagttca ttgatgacga cgaactggta gaagtcactc caacctctat ccgtatccgt
    17461 aaacgtcacc tgacggaaaa cgatcgccgc cgtgcgaacc gtggtcagaa agaagagtaa
    17521 ttaacgttct tacggataaa aaccctgccg aaatgaaaac tcggcggggt ttttttattc
    17581 acgttgagaa agggataagg ttgtcaaaaa atcagcaatc gttggcgtat tatgccgacc
    17641 aatgacgcta tccgcataca cctttgcccg agcgctggca ttccccatcg cgacacccaa
    17701 tccggctaaa cgtagcattt ccgcatcgtt atcattatcg ccaaacgcca tcacttcgcg
    17761 cattgcgata tgctgttgct gtgcatatct ggcgaggctt tgtcctttgc tacacccctt
    17821 ctggagaata tccagttgat gatgccagga ccaggtacag cttagctgta attcatgctg
    17881 tataaactca gcaatatttt gtagttgttt tatgtgccga tgaacgacgc tgatttgcca
    17941 aatattctcc ctactgctta gctcatcagc ctgaaagatt attttatcat cagcacgaat
    18001 tgtcggttta agcggatata cccgcgccag tattttttcc gtttgtaagt gcgtcagcgg
    18061 cagcggatca aggatctgct gttgagccgg ttgataaata taacttccgt tacaacagat
    18121 catcggttcg gtgagcgcca gcgtttgata atacgcatag gcttcacgat gagagcgacc
    18181 ggtgacaagc attattcggc agcccatgtc ctgcatctga cggatagcgg ttagcgactc
    18241 tggcagaatt tgtttattac ggtttagcag cgttccatca agatcaaaag cgattaaacg
    18301 atatcgcatg agcgcccgat cctaaaacag cgtgaggcat ccaggtgatt cagcaatgga
    18361 atatcgagac ggtgctgata agcgagaaaa cagtggcatt gttttgcctg gcaggcagga
    18421 gaattgagcc gttgctgata taaattaccc attttaattt tgctgatatg acaagcaaaa
    18481 agatcgcctt ctgcgttcat aaaaatactt tttcttcctg cggtacagat atccagctgc
    18541 gctggccact gctgcgtttc aaccacatac agcggatcga gttcgctgaa ggcgatggtt
    18601 tcctcaacgg tatgccgggt attggcacac tcgttggcgt taaaccaaaa ataattctgg
    18661 tcaggcaacc gctggcgtag ccaacgaaac tggtcgatat ctttcatact ggcgacagcc
    18721 cccgcgcacc aggttattcc ggcggcagag agcgctaaac actgctggag aaagcgttca
    18781 gcggtaattt gtgagggatg aaaagaacac cataaccgaa gctttgagat atctccgccg
    18841 ccagcacgaa atgactccag caatgacatt aacgaaaaag aggcgttagt ttgtatgccg
    18901 accgcctgaa catgaggata gcggctaatg tctgccagcg ccgccatgta ataacgcaag
    18961 cgtagcgcct cgccataagg cgtaatcatc acattcaacg gcgtacctaa aagaggcaaa
    19021 tggtcaacca tgcgccatag cgcggcttcg tcgcgttttt tatcgttgcg ggcgtgttta
    19081 tggaacgggc aatagccgca atgataatta cacgacttaa gatagccgcg ataaaacagc
    19141 gtatgaatat cgcgcagggc ggggatgctc atctctgccg attctcccgt agcatcacct
    19201 caggcgaaac gaacacagga gcaaggcaat cggataatgc cataccggtc tccgttagcc
    19261 ggaggcgact gccattctga taacagtagc cctgccgtat aaagcgttcc aggtcgggga
    19321 aatcccttag cgcatcgctg gtaaaatatt gctgataatc gctaagagaa agtccttgcc
    19381 agaaaaatag atttttaatg ataaagcggc gtttcatttc atcagggggg agcagataac
    19441 cgtgattaat gacggttttg tccgggctgt cgataaacgc ctgaatgatt tttcgtgatg
    19501 tttgcaggtt cgacggccac ggtgaacagt aatgcagatt gccaagataa cttctgccgc
    19561 ccgcgccgag cgccagtgag ttttcaaatc cgcagctttc cgccgcggcg gatggcgctg
    19621 gattaaggac gaaacggcgc atggacgttt gggtgtagcc cgcgttgcgt aaaagatcgc
    19681 gggctaaaac gtagtagcta tgcatatttt cctggcgagg catattataa agcggataaa
    19741 gaaacagctc ttccggttga taaacgagcg cctgatgtaa cgattccgtc aggcttgcgt
    19801 gagtctggcc gggaatgccg taaataatat caatattgag tgatggaaaa tgacctgcct
    19861 ttagccattc caacgcctgg tgcgcgctgg cggtattgtg gcggcgatgc agcgtatgta
    19921 actcgctatc atgaaaactt tgtacgccaa tactgacgcg attaacggaa aaggcgttta
    19981 atagcgctac tttttctgcc gtggtatccg taggggaagt ttcaattgtt ttataaatat
    20041 tccagtcaac attgagcaca tcaaagacgg aaaaaaataa cttttctaat tgcgcaatgt
    20101 ttaatagcag aggtgtgccg ccgcctacgg tgaagcttgc ccagtggacg ggcgccagcg
    20161 ccatttgtcg gccctaggta ataatcgcgt cgatatagct atcaatgaac gtattatctg
    20221 cgccagtgca ggtaaataaa ttacagaacc cgcagcgact ttgacaaaac ggcatatgaa
    20281 catacagatg tgtgtcgtgc tcgtaaatgc gcggttttac tttgctaaag ctgacgttct
    20341 ccagctcccg ataagccgtc ttatgcggat aactgtacat atactgacga taaatatcat
    20401 tgttattcat attaatgatt accgctcaat aagaaatgca tataaggaac ggtattaacg
    20461 atcggatgat taaaactatg gaaatatttc ccgtcttcgc catagcaggt accgtgatcg
    20521 gaacagacaa taacgaacgt ttcgccgccg gtttggcgga aaatgttcag taatccgtcg
    20581 atgcgggcgt cgatatagcg tagcgcggcg gcatgggtct ctacggtatc gccaggggcc
    20641 gcgccctcaa cgtaaaaatg gttagggtaa tgaatcgtat cgatattgat atacatcatg
    20701 accggttggc tgccagcacg ttcggccatg attttctgga tataatggat ctggttatcc
    20761 atactttctt taaccgtaca ggcaaagcgt ggatgccagt aactctcttt aaacatcgac
    20821 gggaacactt ttcccatgcc ggagcggtta ttaaagaaag agacgccgcc aatacagatg
    20881 gtctggtagc ctttattttc cagacttttt atccatgttg cgtcatcaaa ggcaaatgca
    20941 tttttcgggc ctttacgacc aagtccgata tcttttggga aaagcagcat ggtctgatta
    21001 acggtatcat caataggttt tggcataaaa cctgaaaaca tggcgtgatg cgaaggccag
    21061 gtaaaattac cggccgcctc gcatttcgtc cattgtccat aatgattaag gttgggcgta
    21121 tttccggcgg tttgttcctg aagcgcaata tcgtagcgta acgagtccag tacaataaaa
    21181 agaatatgag cgttattact aattagcgca ttcatatcga attcgccatc gcctgtgtca
    21241 atcgacgcgt gtagcgagac ggggacttca tccattgaat tatacatttt gcttcctcat
    21301 ggcccggatt tgcgcctgat aaattagatt gttctgctgc gcatcctgat aaatcaaatc
    21361 accctggcca ttaatttcaa taatatacgg cgtcaggctg gtggtaagta aaacatcaat
    21421 acccgctaag cgaatgccag gaaaaagccg catggcattt tgacagagcg tatcgatctc
    21481 agccactttt gcggcagata actccagact ttcgaagcgg taagcctggt tttgcaggtg
    21541 taagttagta atgggctgcg aggaggttct gaccactcgc cagataattt cgccatccag
    21601 acagacgatg cgtaaatcat aggttttatg ctttacgctg gctttgggca gccactgttc
    21661 gacgaggttt tcctgctgaa gaacgccatc aataatgagc tggatatctt ctttctgacg
    21721 atactgttgg atttttttgc tgttaaatag ctgttgccct gatatggcaa tcgcgctgta
    21781 aagcacctgc tttgcgccgt caggatgacg gcgcaaagcg ataacgcccg ccgcgccaaa
    21841 acccagcgag ggcttaatga acacgctggc gacccttttt tcctccatga tggcggtgag
    21901 ctgtgcaaaa ctttttacgt cttccgctac caacggcggc gtggggatgc cgtgttccag
    21961 taagcgccgc ttgcagcgtt ttttatccaa caggtgaatg aggcccgccg gatggttaag
    22021 ctaggtgatg ccaggacgcg ctgccatgtt ctgcaaaaaa tggatatagt ccagaccgat
    22081 cgcgtttatt ttgcggatgt tagtttcatt gtgtactggc gggtcgattt taacgatgcc
    22141 agaggtcagc gaagcgtcca gcgcttgcgg atgagtcagc gccgtgacgg attccccaag
    22201 tatggcggca gcctgcataa aataatgcgt gcgcttgctc tgatgggggc caatgagcgt
    22261 aatcacaata aatcccttta tcggtgtgta ggggaatgtg cacattcccc tacacaatca
    22321 ctcggtgtac atcgcattca tataaatatc gccatcgtaa tcatcaggct ccagcgcttc
    22381 tgaaagattc agcggtatcg gcagcgcggc ttttagcttt tcctgcatct ccggcgtcaa
    22441 atagtggtgg tggagatcga gtgtttccag atgcgcaatt cggtctttat gctccagcag
    22501 cgcctctgcg ccgctatcag ttaaggtacc gcatgagagt tccagcacgt taagctgcgg
    22561 caggatatta ctttccagca cccggcgggc gatatcatcc tgctcttcac tgttcatcaa
    22621 ccccagatgg ttgagctgag ggaaaagatc tttcgatacc agcgccatca cgttatccag
    22681 cgaaccgtca aaaccgtatt cctctacgcc caggaagagc ttcagcgttt ttaatgcagg
    22741 gagctgcgca ttttgtagtt cggcaagtac gttagaaggg atgccgccgg aaatgatttc
    22801 caggtgctcc agtttctcat gatgtatagc gcccagtcgc agatccgacg cgcctttaat
    22861 aatcagttcc ttcagattgg gtaacgccgc atagagcctg gaatagtcac cttgtttaat
    22921 ccaggagatc tcgcagtctt cgctctccat atcaccgata aacagtgatt ccaggtgaga
    22981 aaaacggggg gcgttctcca caatcatatc aataataggc tggcaggttt cgtcttccca
    23041 acaatcaccc cagttaccaa tggtcagtga gcgaagcttt ggcagatctt catcggttaa
    23101 aattaaatta atgagctgtt cctgggttaa ttcattgtcc caatcaatat tgaatcgctt
    23161 attcatttgt ttcccttctc tataagcatg aatatggtaa aacgctttgc gaatattatc
    23221 atggcgctta gaggcgggat atcgggagtc tgattcagga tgaatgagcg ggcagaacaa
    23281 ctacccgctg tgatgcagat tcggaaaata gaggcgataa tatcagaaga aatacttcgc
    23341 cccgatacga atctggtttt gctctctatg gtagaggccc acgttacgat ctaaccagcg
    23401 taattcaaag tagggcaacc agtgttcatt gatacgataa cggaaggtat tagtgatttc
    23461 ccaatgatgc ttcgtaccat tactactatt aaaatcatta acgttataaa aatagtgtgg
    23521 ttcaaaggta taagaaaatt tatcggtaat gataaaattc caatagttac cgatttcata
    23581 gctgtcatta ttatccagtt cgccattcaa atcggttgaa ctataattat tgtgattata
    23641 tcggttacgt accgtaagat taaaccacgg ggtaaattta tagttaatat ccagatagac
    23701 ggcgccgccg gaaccaatgc ttttgtcgtt tattaacccg cctggctgga tggttaattt
    23761 atctgtaggt ttaaataacg gataccagcc ctcaatctca ttataaccgt gctttaattc
    23821 atcatcacgc tgtagcgtat aggtattggt caacataatt ccggccccca tatcggagtt
    23881 atagccgacg cgcagcataa actccatttg gtcagacgcc aggttatagg cctcacggtt
    23941 ttctacataa gcgccagcaa aaacagaggt ggatattact gaagttaata tcactagagt
    24001 attcagagat ttcataataa atccattttt caaatatagg gaagccgcca tccatcggga
    24061 tgaataaagc ggcaagcgtc gtttaattat ttacagtaga aatactttgt ttattattag
    24121 ttgcgacaat ttgattgcct gttttctttc gttgggcaat ttcctcgata ataaaagcga
    24181 aacgttgttc attgagctta taaaaaaagc ccatcgttag tgctgcgata atggcaagac
    24241 cacaaggcca taaaaaaatg agctgacgca aaccaagcaa cgtggtgtca ctttgagcta
    24301 tgttggggat ataaccgatt tgcgtcagca taatacctgg caaaaagcca gcaagcgcag
    24361 cggaaatttt gcgggaaaag gtataacccg tatacaccga gccttcagcg cgaatacccg
    24421 ttttccattc gccgtagtca accgtatccg gaaccagcgc ccagttcagg ctgttgacga
    24481 aagcggtacc gaagaaggca atacaagaga aaataacaaa caggaatgac gttccgcccc
    24541 agataaaatt caggatatcg ccaacggccc acagtatcag accaccaaga taaacctgtt
    24601 ttttcccgaa gcgttttacc gcatcaggta ctaataagac gccaatcagg atacagccca
    24661 tgctgaaaaa acccatccat gacaacaaat gaatatcgtt cagcacgtac tgagtgtaat
    24721 aaacctgaat ggccagctta atattaaagg cagccagcgt gcacaaattg gcaacgcaga
    24781 gcaccagcag cggcggatta cgaaaaatcg cgcagaagga cttcaatatg ctgggtttat
    24841 gcgtgtcagg tacggtttcg atataccgtt ctttcacccc gctaaagcac caccacatgc
    24901 tgaacagccc gcagaccgaa aaaatgactg ctgcaaccag ataacccagc gaaggggaac
    24961 gggtaaacag cgcctgaatg ggcataaaac ctacggtaca aagaagaagg ccaatggtag
    25021 cgccgccttg tcgccatgcg gcgagctggg cccgctcatg cggatttttg gtaatagcgg
    25081 gtaccatcgc gccgtatgag cagttcatca ggctgtagaa cagaccgaac aacataaaca
    25141 gcaccgtcgc gaaggctgtt ttaacgggta aagtaaagtg agtggcaaag aattgcgcag
    25201 tagcaaccag agccaccgga aatgacgcat acagaataaa aggccgaaac tttccttttg
    25261 cgccaatatt acggcgtgaa tccagcaata cgccggtgag catatcggta aaagcagtga
    25321 agaatttcgc caccagaaag ataattccac cgtaatatgc aggcatcccg agttcatcgg
    25381 tataaaactt cagtagatac agcgtaccga tacacagcat cagatttgag ccgaaatcgc
    25441 ccacgccata ggcgcatttt tcccgcaggc tcaactttag cgttagcgga tcatgattag
    25501 acataatcgc ctctcaaaac gccccgcagg gcgttatatt ttattgttgt taaaccgtat
    25561 gtttccgggc ctcaatctct tccacaattc gcacgtacat cttctcgttg aggttgtaga
    25621 aacagcccat cgcaataatg gtgatgaccg ccagcacgca aggatatata aagatcaact
    25681 ggcgtaggcc ttcgacggtg cctgccgatt gcaccacatt cgggatataa ccgatttgcg
    25741 tcagcatcca gccggggaag aaccctgcca gcgcctggga gaccttacgg aagaacgtga
    25801 agccggtgta aaccgtccct tccgagcgga cgccggtgcg ccattcaccg tactccaccg
    25861 tgtcggaaac cagcgcccag ttcaggctgt tgacgaaggc ggaaccgaag aacgccaggc
    25921 aggagaaggc gacaaaactg accgagccgc cgccaaagaa gtagttgagc agatcgcccg
    25981 ccacccatat taacagcccg ccgatataga ctttcttctt gccaaaacgc ctgactgcgc
    26041 cgggcatcaa aaagacgccg ataaaaatac agcccatgct aaagaagccc atccaggaga
    26101 ggaggatcgg gtcgttaaga acgtactgtg tgtaataaac ttgaatcgcc agtttgacgt
    26161 tgaaggcgcc gagagtacaa aggttggcga tacacagaat aaacagcggg cggttaccgg
    26221 cgatggcgcg gaacgactgc aataatccag gcttttgcgc gctatcgaca ggtttcactt
    26281 caacgtagcg ctctttaacg ccggcgtagc acagccacat aaatagcagg ccaaacaatg
    26341 aaaatagcgt ggcggcgaaa atatagctga gttgggcatt gccttcgatc aggttcatga
    26401 ccggcacaaa gccaacggta cacagcagca ggccgagagt ggcgccgccc tgacgccacg
    26461 cggcaagcga ggcgcgttca tccgggttct tggtaatcgc gggcaccatc gcgccatacg
    26521 agcagttcat catgctgaaa accagcccat acagcataaa cagcatcgtt gcgacgacgg
    26581 tttttcccgt cacctcaaac ggtgtgccga caaagttagc aatcgccagt agcgttaccg
    26641 gaaatgccgc gtaaagcacg aacgggcgga atttgccctt cggaccaatt ttacgccgcg
    26701 agtcgagcat aatgccggta cccatatcgg taaatgcggt aaaaaatttg gcgatcagga
    26761 aaatgatccc gccgtaagtc cctggtaaac ccagcacatc ggtataaaat ttgagtaaat
    26821 agagggtccc gatatctaac aggatattgg aacctaaatc ccccagtcca taggcaagtt
    26881 tttctttaaa cggcaagcgt atggttgccg gattcgatga tgtttgactc attattcttc
    26941 tccatctgcc cgcaggtttc cctgcgggcg agccgtatta gatattccgt aaagaagcaa
    27001 aaagtaaagc ccactcgctc ttcgcgcgat agaagaccgg cggcttgcca atcggcgcat
    27061 ccacggtaat ttcaccgccg tggtgagctt cgccggtcca gatattcacc cagtgatctt
    27121 ccggcaggta cagcgtccaa tcgcaacgcc cctgctcgtg aaccggcgcg accagcagat
    27181 cctgaccgag cagatattga tatttcaggg tgtaggtagc ggcatcgttc tcgtagtgca
    27241 ggaatagcgg acgcatgacc ggcagaccgg tagccgcgtt ttgcgccacc gcctgcttga
    27301 gatacggttt cagcgtggta aagacggtgg tcatgcgggc aaagtgggca atagtttccg
    27361 cgtcgccgtc gaactgccag ttattgccgg ggcggttgcc ttcatgggtg cgcatcatcg
    27421 gcgtaaaggc gctgaaatcg caccagcgca gcagcaactc tttgctgcgc ttcatgtcaa
    27481 acagggtggt gtagccgccg atatcgctgt gatgcagacc atggccggtc atcgccagcg
    27541 acaatgcagc aggcacgaca gaggccagac catcatcaag actccagtca acgttctggt
    27601 cgcctgccca catcatggtg gaatatttct gactgccggt gtaacccgca cgcataaaga
    27661 acaggatctc gccgagcttg ccggtctcct gtagcgcttc gtagttacac ttcgcccaca
    27721 gtgcgggcca ggcgttatgc atgatctctg cgctgacgcc gttgtgcaga tacgtgtcgg
    27781 tcggcagata ttcgccgaaa tccgccatcc agccgctgca gccgagcgcg atcatgttct
    27841 ttttgatgac atctttgaac cagtcgtaag cttcaggatt agtcagatcg accacgccgc
    27901 catagaattc gccaaactcg accagatagt cgccgcccgt ggcgtctttc gccagatagc
    27961 cgtgtctcgc cgcctcagcg cagaggtctt tatcactggc gacgtatggg ttgatataag
    28021 agaggaactg gacgccttct tctttccact gtttgatccg gctatccagc tgtggatagt
    28081 tgtcgctatt ccacttccag ttccacatca cgcgcttgcc aaaggaggtc atgcggatac
    28141 cggaccagtc ctgcgcccaa ataccgttca cttttacgcc tgcgttgcgc atggtatcca
    28201 gtttttgctg acaaacttcc gtaccgccct gaatgccgag cgtgacgccg tcgtaaaccc
    28261 agtccggcag ctccggctgg cgacctaaca gcgcagtcag tttttccagc agggcgatgt
    28321 aggtgtcggc acactcaaaa cgcagcgtag ttttatcttc ccacagcgcc agttcgtgat
    28381 actccggcgc gctgaagtcg aaattcatat agcagctatt atcgacgtgg cagtaatact
    28441 tctgcgtgct gacaaaggtc ggttgcggga agaaggtcca gtaatagtcg ccgccggcgt
    28501 tctctttaca gtctgcctgc caggtgacat agctggtttt attacggcca acgccctgtt
    28561 cgctggtcca cagcgggaac ggcttgccgc gcaaatcgaa ataagagaac tgttcgccgc
    28621 agccgtagat atggtcgtct ggattagctg cgaggcgtaa ccagatacgg ttatggtgca
    28681 ggtcgtcgtt ttgcagatcc aacgtcaggc gtcccgcctc atcggcggag atgcgaaggg
    28741 tggcgctaat tgttgcgcca cggctgaatt gtaccagcca gccgtcgggt agctcgctga
    28801 cggtggcctc cgttaatgca atcttctcgt taagtttgtc tttgatgctg aagttgccgc
    28861 gaaacatgtc aatgtcggca acgcccgcgc caatccacag acaggggttt tcggcgctgt
    28921 ggcgtaaaat caggcgctgt tgccagctaa gcgcaaaacc atcctgtgat gttgtcagtt
    28981 caaaatcggt tgaccgttgt ggtagagaat tcattgtaat ctccgtgaat gtagggtaat
    29041 tcggtaatcc atttgggcta gtcgcagccg atggaaaaat gcagttgatg gatcgctttt
    29101 ggggcaagat gaatcagtgc gatcccggaa ttaaatgcat cgggcgggca gctcataggc
    29161 tctaccgcga gacctttcgg ctgagttttt cgccggtata gatctgtagc cagggttgct
    29221 tgctgcgtaa aaatgtagac atgttctgcg ttgggctggt aagtctgacc tcccactccg
    29281 ccggggcagt cgcggtctta accgcatgat caaggcgcgt ttcgccgagc aggcatgatg
    29341 cggaaaaatt cctgcctgcg ggcaattctt cgcttgcagg cagtgttaat acacagctat
    29401 cgatgctttg cagattacaa gtcaaataag gatgtgcgcc cgcgccataa ggggctgatt
    29461 catcgccaat gttttgcgta cgaatcaata cgtgcagccc actggcggca tctaaccgat
    29521 aaatcacttc cgatatcaac gcaaagggat agccgtaaga gggcggcaga aaaatcgtta
    29581 gcgacgcttc cgtcgccgac tgataattaa tctgccagtc tcgccaggct aacagaccgt
    29641 gaatggcggt ctgcgaaacc gggtcgttaa cggcaagctg gaaaactttg ccgttatagg
    29701 agtagcagcc atttgtcacg cgatttggcc agggaatcaa taccttcccc agatgcgcca
    29761 tgggtatttc ttccggttta tgcgggatga ccacatgacg tccatgatga gtcagttccg
    29821 ccagacctgc gccaaccgtg acgattttcg cctggtaatg gcccgcatta agctgaatag
    29881 tttttccacc gctgtgcatg gctgccatcc tcatgaccta tttcgcgttg atatccagga
    29941 gacccgccgc gaccgccgga gccaggcccg gcgccagtgg cagacgagga atgaccaggc
    30001 agtgcagcag atggtaaata tcttacttgc cgtcccacac tttggtggtc actttgttat
    30061 cggcgtccag ctcttgccac caggaaccat tttcatagtc catcaggtac ttaatgcagt
    30121 agtcccacca tttctgatac cactcttcat actggctatc gcccgtcagg gtgtagaggg
    30181 cgtaggccgt acccatcgct tccacaatcg gccagcgcac gcgttcacgt acgataggtt
    30241 taccgtccca gtcgactgag tagacaaaac cgtctgcgcc atctggcgcc caggcgtcgc
    30301 ggatagtggc atggaacaga cctttcgcat cctccagcag ccaggcgggg ggcgtttcga
    30361 agcgggcctc cagcgcagca tggagatgga gcatcagacg gccccactca atccagtgac
    30421 ctggcgtacc gccgtaggcg cggaaacggt gggcaggatt atctttgttg tagtcgcgga
    30481 tagggttcca ctgtgaatcg aaatgttcat taacacggta atgattattt ctggctacat
    30541 catgaataat gactgatgcg attctgatag cgcgatccag ccattttttg tcatgggtaa
    30601 cgtcataaac aatcaggaac gcttcgacgg cgtgcatatt ggcgttaccg ccacggtaat
    30661 cttccgtctg gctaaaggct tcgtcccagg actcaaggca catctgctct tcttcactcc
    30721 agaagtattt ctcaatcact tctatggtgt aatccagcaa ttttctggct tcagggtgcc
    30781 cggtcgtgac ggcgctggcc gcacccagca aggcgaagaa gtgttgataa ccctgtttag
    30841 aggcatccac cacgccctga tcgttaacgc aggcatacca gccgccgtat tttttatcgc
    30901 gcagcgcgcc gttcagggct ttgatgccgt gatcgaccag atcataagcg cccggtcggc
    30961 ccatcgacgc cgccacggaa taaacgtgca gcatacgcgc cgtgatccaa agatgggtgc
    31021 ccatctcttc tttgatttgc cctttatttc ccagccagcc gaagcctgtc ggcaccgcgg
    31081 cgtttttacc gaaattaaag atgcggtcgg tttcctgctc cagccagcgg ttgtggctca
    31141 acgtgttaaa ccatttcatt ctttcatcct cgtattaacg acgttttgcc atcatttcat
    31201 cgacgatctc gcccagacgt tgcaatttag gcgcggaaac atcacgtagc atcagctcgg
    31261 tatccggtaa accaatcact gatgaccaga ccgcgcgtcc cgccaggaac ccggatgcgc
    31321 cagcttccat ggcgaccctg actgcgcgag ggaacagttt ttcgtccaca ccggaagaga
    31381 ggatgaccca cggcatattg atatgcccat tcaggcgttg tgaggcggta agaagatcgg
    31441 aacgcgcgcc tttgccgtag agcggcattt caactttgta aagatcggcg ccgctgtcgc
    31501 ccagctcttt ggccgcatcg ataatcgcct gctcgcgatc gaacttgtcg ccgcagcgcg
    31561 gcggacgtac aaccggttcg ataatgctca gcaaaccatt ggagtgacat aattcattga
    31621 attctttaac catatccaga cgctgctgcg cgtcttcatc gctgcgccac agcaccaaca
    31681 gttttaaggc tttcgcgcca tcccgtttta ccgcctgcgc attaattttt ttatcaatga
    31741 ccacgttatc aacgggaata ccgttgcctg ggatgaaatc atccgccgcg acgatcatgg
    31801 cgcagctttt agcgaccgcg ttttgttcta cggcctggcg ataacagaac tgctgatcca
    31861 gcagaacggc agaggcatac ggggaaagaa ttttcgccgc attcactttg aaatccgtca
    31921 gcacgctatc ggcaacgggt gttttcgcac cagcagcagc aaacattaaa cgcatcgcct
    31981 cgcgctgatc gacagccagc atggcaaacc cgccggacgc tcgcgtaatg tctttgatgg
    32041 tgtagttgtt cattcaattt tcctttatac agtcgttact tttttacgtt ggcagtcagc
    32101 ccggcgctga tgcgcacctg ttccaggatg gcgctccagt cttcccgacc gcggcctgcg
    32161 gcccgcgcca ggttataaac ttcacgggag gcggcgccga gcggcatcgg tacgtgcagt
    32221 tgattggcga catccaacgc gatgccaaga tctttgtgcg ccagatcgat catgaaggcg
    32281 ggagacagat cccctttcat cactttattc ggccaggtgg tggtgaaatg ccctttgcct
    32341 gcggcagtgc cgctcatcac ttttaaagcc acgtcgaagg aaagccccag cgcttcacac
    32401 agcacggcgg cttcggcgga gagcgcattt agcgcaatac tcatgtagtt gttgatcagt
    32461 tttacgcgaa tacccattcc cgggccgccg gtgttgacca gctcattacc catcgccatc
    32521 agaacagggg tagcgcgctc tacttgctcc gtcgtaccgc ctgccagcaa caacaatgtg
    32581 ccggtaatcg cgttgtcgga tgtccggcct accggcacat ccatcatgct gaaccctttg
    32641 ctctgcatgt cggcaatcag cttatcggtt tgcaacggat gaatagtgga catatcaatg
    32701 accagcgctt cacgggaaag agtttcacaa acgccttgct cgccaaacaa aacggaacga
    32761 accagatcgc cgttcgggag catggtgata acaaattcag cgccgatggt tgtctgagcc
    32821 gggctgcttg caggttgcgc gcctttgtct accagacgct gtacggcgtc gggattaata
    32881 tcgaagacgc tgagttgatg gccctgcttt agcagattgc tcgccatagg ggagcccatc
    32941 tgtcccaacc cgataaatgc tataactgcc atatcgttct cctgaacacg gtggtgtcat
    33001 tttttgtcat taatgagcct tttctgtctg tttgtgatcg tatttgtaat ttatggtcaa
    33061 aaaattgaca gccgtcactt tttaaacatt tcgtgaaatt aaaatgagca catcgaaaat
    33121 gcttgaggaa tgaccatggt tcgtattgct tgtgtaggta ttaccgtgat ggatcgcatc
    33181 tattacgtgg aaggattacc aacagaaggg ggcaaatatg tggcgaagcg ctatacggaa
    33241 gtgg
//
LOCUS       DAGWFR010000024        32400 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.024, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000024 DAGWFR010000000
VERSION     DAGWFR010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 32400)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32400)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32400
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.024"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(12..731)
                     /locus_tag="MOX77_001274"
     CDS             complement(12..731)
                     /locus_tag="MOX77_001274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2884 domain-containing protein"
                     /protein_id="HCA3356860.1"
                     /translation="MMRKTLLAAVLTFTAMAAHADYKCSVTPRDDVILSPQTVQVKGE
                     NGNLVITPDGNVMYNGKQYTLSAAQREQAKDYQAELRSALPWIDEGARSRVEKGRVAL
                     DKIIAKEVGESSNMRSRLTKLDAQLKAQMNRIIEHRTDGLTFHYKAIDQVRADGQQLV
                     NQAMGGILQDSINEMGAKAVLKGGGNPLQGVMGSLGGLQTAIQNEWKNQEKDFQQFGK
                     DVCSRVVTLEDSRKALVGSLK"
     gene            complement(781..1107)
                     /locus_tag="MOX77_001275"
     CDS             complement(781..1107)
                     /locus_tag="MOX77_001275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggL family protein"
                     /protein_id="HCA3356861.1"
                     /translation="MAKNRSRRLRKKMHIDEFQELGFSVAWRFPEGTSEEQIDKTVDD
                     FINDVIEPNKLAFDGSGYLAWEGLICMQEIGKCTEEHQAIVRKWLEARNLEEVRTSEL
                     FDVWWD"
     gene            complement(1107..1826)
                     /gene="trmB"
                     /locus_tag="MOX77_001276"
     CDS             complement(1107..1826)
                     /gene="trmB"
                     /locus_tag="MOX77_001276"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HCA3356862.1"
                     /translation="MKNDVISPEFDENGRPLRRIRSFVRRQGRLTKGQEHALENYWPV
                     MGVEFSEAPVDFATLFGREAPVTLEIGFGMGASLVAMAKARPEQNFLGIEVHSPGVGA
                     CLASAHEEGVENLHVMCHDAVEVLHKMIPDNSLSMVQLFFPDPWHKARHNKRRIVQVP
                     FAELVLSKLKLGGVFHMATDWEAYAEHMLEVMSSIDGYKNLSESNDYVPRPESRPVTK
                     FEQRGHRLGHGVWDLMFERVK"
     gene            1981..3033
                     /gene="mutY"
                     /locus_tag="MOX77_001277"
     CDS             1981..3033
                     /gene="mutY"
                     /locus_tag="MOX77_001277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HCA3356863.1"
                     /translation="MQASQFSAQVLDWYDKYGRKTLPWQINKTPYKVWLSEVMLQQTQ
                     VTTVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYARARNLHKAAQQVATLHGG
                     EFPQTFAEIAALPGVGRSTAGAILSLALGKHYPILDGNVKRVLARCYAVSGWPGKKEV
                     ENTLWTLSEQVTPARGVERFNQAMMDLGAMVCTRSKPKCTLCPLQNGCIAAAHESWSR
                     YPGKKPKQTLPERTGYFLLLQHNQEIFLAQRPPSGLWGGLYCFPQFASEDELREWLAQ
                     RHVNADNLTQLNAFRHTFSHFHLDIVPMWLPVSSLDACMDEGGALWYNLAQPPSVGLA
                     APVERLLQQLRTGAPV"
     gene            3061..3336
                     /locus_tag="MOX77_001278"
     CDS             3061..3336
                     /locus_tag="MOX77_001278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative damage protection protein"
                     /protein_id="HCA3356864.1"
                     /translation="MSRTIFCTYLQRDAEGQDFQLYPGELGKRIYNEISKDAWAQWQH
                     KQTMLINEKKLNMMNAEHRKLLEQEMVSFLFEGKDVHIEGYTPEDKK"
     gene            3449..4534
                     /gene="mltC"
                     /locus_tag="MOX77_001279"
     CDS             3449..4534
                     /gene="mltC"
                     /locus_tag="MOX77_001279"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane-bound lytic murein transglycosylase
                     MltC"
                     /protein_id="HCA3356865.1"
                     /translation="MMKKLLALAVIAPLLISCSSSTKKGETYNEAWVKDTNGFDILMG
                     QFANNIENLWGYKEVLIAGPKDYVKYTDQFQTRSHINFDDGTITVETIAGTEPTAHLR
                     RAIIKTLLMGDDPTSVDLYSDVDDIKISKEPFLYGQVLDNTGQPIRWEGRATTFADYL
                     LKTRLKSRSNGLRIIYSVTINLVPNHLDKRAHKYIGMVRQASRKYGVDESLILAIMQT
                     ESSFNPYAVSHADALGLMQVVQHSAGKDVFRSQGKSGTPSRNFLFDPASNIDTGTAYL
                     AMLNNVYLSGIENPTSRRYAVITAYNGGAGSVLRIFSNDKIQAANMINRMSPGDVYQI
                     LTTRHPSAESRRYLYKVNSAQRSYRRR"
     gene            4751..6007
                     /locus_tag="MOX77_001280"
     CDS             4751..6007
                     /locus_tag="MOX77_001280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside permease"
                     /protein_id="HCA3356866.1"
                     /translation="MNLKLQLKILSFLQFCLWGSWLTTLGSYMFVTLKFDGASIGAVY
                     SSLGIAAVFMPTLLGIVADKWLSAKWVYALCHVVGAITLFMAAEVTTPGAMFFVILLN
                     SLAYMPTLGLINTISYYRLQSAGMDIVTDFPPIRIWGTIGFILAMWGVSFSGFELSHM
                     QLYIGATLSVLLVLFTFTLPHIPVANQQKNQSWTSMLGLDAFALFKNKRMAIFFIFSM
                     MLGAELQITNMFGNTFLHSFDKDPLFASSFIVQHASVMMSISQISETLFILTIPFFLS
                     RYGIKNVMLISIVAWMLRFGLFAYGDPTPFGTVLLVLPMIVYGCAFDFFNISGSVFVE
                     KEVRPEIRASAQGMFLMMTNGFGCILGGIVSGKVVEYYTQNGITDWQTVWLIFAGYSL
                     VLAFAFVALFKYKHVRVPASSQPVAH"
     gene            complement(6069..8193)
                     /locus_tag="MOX77_001281"
                     /pseudo
     CDS             complement(6069..8193)
                     /locus_tag="MOX77_001281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462030.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine decarboxylase"
     gene            8618..9325
                     /locus_tag="MOX77_001282"
     CDS             8618..9325
                     /locus_tag="MOX77_001282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF554 domain-containing protein"
                     /protein_id="HCA3356867.1"
                     /translation="MVIGPFINAGAILFGGVIGALLSQRLPERIRVSMTSIFGLCSLG
                     IGILLVMKCANLPVMVLATLVGALIGEFCLLEKGINGAVAKIQQLFMASGKKPTHDSF
                     IQSYVAIIVLFCASGTGIFGAMHEGMTGDPNILIAKSFLDFFTAIIFACSLGIAVSAI
                     CAPMLIIQLTLAACATLILPLTTPAMMGDFSAVGGLLLVATGLRVCGIKMFPVVNMLP
                     ALLLAMPISAAWAMFFA"
     gene            9431..9506
                     /locus_tag="MOX77_001283"
     tRNA            9431..9506
                     /locus_tag="MOX77_001283"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9464..9466,aa:Phe,seq:gaa)
     gene            9667..10480
                     /locus_tag="MOX77_001284"
                     /pseudo
     CDS             9667..10480
                     /locus_tag="MOX77_001284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009114529.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="integrase arm-type DNA-binding domain-containing
                     protein"
     gene            11601..11918
                     /locus_tag="MOX77_001285"
     CDS             11601..11918
                     /locus_tag="MOX77_001285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001141621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAAR domain-containing protein"
                     /protein_id="HCA3356868.1"
                     /translation="MPTAARLNDKGTQYDDYYETVSIADSPTVFIDGLSVARMGDAVD
                     CGGMVNMTRMKSGKASKVRKVDRVGKQGFELHHIDEVANRGDVYNVDNPRVNTILTYT
                     GDL"
     gene            11915..12181
                     /locus_tag="MOX77_001286"
     CDS             11915..12181
                     /locus_tag="MOX77_001286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000768133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriocin immunity protein"
                     /protein_id="HCA3356869.1"
                     /translation="MKLKENISDYTESEFIDFLRVIFSENESDTDETLDPLLEYFEKI
                     TEYPGGTDLIYYPETESDGTPEGILNIIKEWRESQGLPCFKKSK"
     gene            12424..12702
                     /locus_tag="MOX77_001287"
     CDS             12424..12702
                     /locus_tag="MOX77_001287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001729069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriocin immunity protein"
                     /protein_id="HCA3356870.1"
                     /translation="MELKNNLEDYTEDEFIEFLNNFFEPPEELTGDELSKFIDNLLRH
                     FNKITQHPDGGDLIFYPSEEREDSPEGVIEELKRWRKSQRLPCFKENK"
     gene            13105..13608
                     /locus_tag="MOX77_001288"
     CDS             13105..13608
                     /locus_tag="MOX77_001288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001151807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356871.1"
                     /translation="MAKYIFLFIWIVTFSVSAGERGYYLFVWGNPEGKEYFKEYRADE
                     RIYAVNKSCWNERAGNSIRIVYVDTYPHGITDSLINSFLAGNNKSIINIRVSLSNFSD
                     DQILHGFDGMLIINKKNEEIEIFTIPVVGANYSYKDKFLVNVHDFELFDGKICNALMP
                     IDSYFSP"
     gene            13867..14052
                     /locus_tag="MOX77_001289"
     CDS             13867..14052
                     /locus_tag="MOX77_001289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001729072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3289 family protein"
                     /protein_id="HCA3356872.1"
                     /translation="MQDHFSLDSNDITHWLYSHWDVFKIWFVLQHYEKEGYEFKPFIH
                     KIILDALRRQGKKSPGA"
     gene            14255..14779
                     /locus_tag="MOX77_001290"
     CDS             14255..14779
                     /locus_tag="MOX77_001290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016504929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF943 family protein"
                     /protein_id="HCA3356873.1"
                     /translation="MSWVITKKFIYIVTIAILFCSVVIYLWSGRPVEIVDVHYYSGKD
                     INILARHFPITDRGKLNWWRENERKILEKYNLPKNNFSVYIWDFGDGYQKLSPYDAED
                     EFYCFPDIKSESKCIKKDIYMPAESGGNYYRMFLFSGSGYFYQPKKDDDKLIESNNST
                     KLNQDKSHEKNHYH"
     gene            14757..15407
                     /locus_tag="MOX77_001291"
     CDS             14757..15407
                     /locus_tag="MOX77_001291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000724403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356874.1"
                     /translation="MKKITIISLFLILPLKANIIPSISLPDKLSESKYSVRMLRIDAR
                     IDYRVETPECKNVKFNDYFFLNENIKDLNDKNHVYDPEFYPITLWSCSYSREVYDVGE
                     YGSHIQHIVFDKNKNIWVIDDDATKTNNEFKPSFLYNISSVNAQGFLIIDENISEMDK
                     TIYEDDNIKKKFYFCMIDGSHALCGAGSLIRKIDNQLIDFTPYILKSLESMEIGVN"
     gene            16841..17524
                     /locus_tag="MOX77_001292"
     CDS             16841..17524
                     /locus_tag="MOX77_001292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LuxR family transcriptional regulator"
                     /protein_id="HCA3356875.1"
                     /translation="MSALSTTGHNDGITLHCLQSIAQLIPLSSAVFYRVNAYLKPEAY
                     VLHNISNSTHQQYLEHFQPLDPLLPSRFGQQVITVATMTPGICARHRHYYHEFMLPNH
                     VCDMIEIFIRRGHRIIAGISLMRDIPFSSEERLRAQAVQPLLGLAIHDSLQEDNDLAS
                     ILTAKEREIVGMVCEGASNKLIARQLNISLSTVKTHLRNIFAKTEVINRTELVSRTRM
                     SSVQHSLNM"
     gene            complement(17629..18186)
                     /locus_tag="MOX77_001293"
     CDS             complement(17629..18186)
                     /locus_tag="MOX77_001293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3156 family protein"
                     /protein_id="HCA3356876.1"
                     /translation="MSSVPWFKNALMNMVLRDLSGWRCEKLTEHSAVLHLNAFTQVIC
                     HVQQKRLFMASIHSCEFRVKGTINYPLQGKIRAHQPGWLKRYPVIFTGSKSTAGLISY
                     LNRFPNLQQALSELDYRRFTLVLHHKEWYCSIELWAASEVVCKMPPLRRYLRLERHQR
                     VLLLSVINMINQAMNQWLQQDADAR"
     gene            complement(18164..19663)
                     /locus_tag="MOX77_001294"
     CDS             complement(18164..19663)
                     /locus_tag="MOX77_001294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HCA3356877.1"
                     /translation="MFKNRLASHLERGVIGFPTTLASSVGLIMASPVILTVTSGFGSG
                     GDTFALAVLLAFIMMQAQITTFAEAATLIPTTGSVYDYISCGMGRFFAITGALCAYLI
                     VHIFAGTAETILAGVMALVNFESVSEHVAMQHNTWMVGVGMVVVFGILNAIGVEVFGK
                     VEVFLTFGMWTTLTIFGLCGILLSPVTHHSGWFGAPLDVSNLSGLFGYIGMAMFMFVG
                     CELVTPMAPEIKKAHRTIPRAMALGLLAVAGCMFLYGAAINRQVNNVVVDAANHIFLL
                     DTPMAIPAFANRVMGHVGQYWLGVGLLLAGCATINTLMAAVPRIIYGMALDGALPRFL
                     TWLHPRFKTPVIAIAFGVAIPCLHAWYLNGDIDHIVPLILAAVCAWGVAYLLVTLSVV
                     ILRIRRPDLPRAYRAPWFPLPQIISSVGIIIAIINIAPPGMNSRDVLIPFGIMLGLTA
                     AYALFWTLCVQRVNPFLPLPVEEVVERAMGNYEKRNNEEMTPDVLRPLV"
     gene            complement(19872..20245)
                     /locus_tag="MOX77_001295"
                     /pseudo
     CDS             complement(19872..20245)
                     /locus_tag="MOX77_001295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462042.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
     gene            complement(20260..21561)
                     /locus_tag="MOX77_001296"
     CDS             complement(20260..21561)
                     /locus_tag="MOX77_001296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HCA3356878.1"
                     /translation="MNTKIDALNYYGATKKYPLHFPALQDDIDADVVIIGGGFSGINT
                     ALELAEQGITNVVVLEARHLGYGGTGRNGGQVMAGIGHDIEAVKKYVGAAGMETLFKI
                     SNLGAGIIRERIRKYHIDADFVPGYGYLAYNQRQLKTLQQWEKEFKAATPEDDIELYT
                     GKDVQQVIGSDVYCGVLKHMGGGHVHSLNLLLGSAQAANSLGGKIFEYSPVVEVSYGK
                     TVRVRTAMGSVKAAKLLWACDSFLNNLEPEIYKKTLVTYSYQVSTEPLSSELVERISP
                     LRGAFSDIRPVINYYRLTKENRLLFGSATRFLEYTPHDFAAWNRTLLTEVFPYLKDVK
                     IDFAWGGPMACSANLFPQIGTLREHNNVFYVQGYSGFGVTPSHIVCKILAEGINGGSE
                     RYRLMSSIPHATIYGRDSLRLLLVSAGKLIHQTAGFWKGRN"
     gene            21723..23207
                     /locus_tag="MOX77_001297"
     CDS             21723..23207
                     /locus_tag="MOX77_001297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent phenylacetaldehyde dehydrogenase"
                     /protein_id="HCA3356879.1"
                     /translation="MSDVTLLAEVTTFLRQRHGQFIAGERQAGNGTNFSVTNPATGKI
                     IADVVSTTPAQAKEAMQSARRAFDVWRKMPTLQRGALLLKLADTLAAHREELAQLESV
                     CSGKTIMLSRGLELDQSVAFLRYFAGWAGKITGETLNVSLPSMGEERYTAFTQRQPIG
                     VVVGIVPWNFSIMIAIWKLAAALVCGCTIVIKPSEYTPLTLLRVAELAKEAGFPDGVI
                     NVVNGAGGEIAQQLIAHPDCAKVSFTGSVATGEKVRRSATSSGKRVTLELGGKNAALF
                     LNDLTAQAMVNGILEAGYLNQGQICAAAERFYLPQEKLDTVMTLLRQRLSEIVPGSPL
                     DEKTVMGPLANQVQLEKVLRLIQRAREEGDTIVYGGETLPGEGYFLQPTAVKVRSKNS
                     TLMHEETFGPVCSFIGYQNEKEALSHINDSPFGLAASVWSENISKALRYAEDIDAGMV
                     WVNMHTFLDPAVPFGGMKGSGIGREFGSAFIDDYTELKSVMVRY"
     gene            complement(23343..23723)
                     /gene="iraD"
                     /locus_tag="MOX77_001298"
     CDS             complement(23343..23723)
                     /gene="iraD"
                     /locus_tag="MOX77_001298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-adapter protein IraD"
                     /protein_id="HCA3356880.1"
                     /translation="MMTPTIPVALFDRLLVEGISPHELVRRKLICLFNSCAVPGGETL
                     PPLLTRGMPEWHEVNVGDKRVLNWFCRELRAAILRYEPSINMLKVSVKDAYHQTLALS
                     LEAMLQDESEPLRLEIAYSNGRWR"
     gene            complement(23723..24208)
                     /locus_tag="MOX77_001299"
     CDS             complement(23723..24208)
                     /locus_tag="MOX77_001299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system tube protein Hcp"
                     /protein_id="HCA3356881.1"
                     /translation="MDAIFLKLDNIKGESQVEGFEDQIEIMSYSHNVAMQVNNDVSLT
                     ERTSGRAHVGEMSLTKFVDLATPVLNEYCCSGRLIRTAVLTLCRNDDGKMRSLIVYTL
                     TNVLISQLSVSGGAGGKPVETMSLNFTKIKWQITAEKSDGAQQESRASVWDLAMDQIG
                     K"
     gene            complement(24934..25857)
                     /locus_tag="MOX77_001300"
     CDS             complement(24934..25857)
                     /locus_tag="MOX77_001300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase"
                     /protein_id="HCA3356882.1"
                     /translation="MGYLKLPEGKRIAVNLGVDVDAQSLWLGGFNRPSPSFMSRGEFG
                     AQVGVPRLLKLFKENNIKTTFFIPGHTVDTFPEISKAIFDAGHEIAHHGYYHENPTLV
                     NRDTERRLMDLAFACYKRHFGIRPVGYRSPYWDYSENTLDLLEEAGFLYDSSLMARDL
                     VPYHPQRWQVNWETGNIAGPASAILEIPVSWYLDDFPALAYTGNQEGMSDTDGVLRRW
                     KDIFTYAYNHQENGLYAMALHPQIIGHGHHMMMLSRLIEHIKGHDGVWFATCEEIASV
                     WVDDEEDRQKMLRPDVRGVAPVPDDYGWPGK"
     gene            complement(25896..26738)
                     /locus_tag="MOX77_001301"
     CDS             complement(25896..26738)
                     /locus_tag="MOX77_001301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001787272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HCA3356883.1"
                     /translation="MVTEINTFEDFITKVRILLNKSQGADAVIFPELFTIELFTLLKK
                     WQERPISHLTLIDQFTDAYKQLFQQEAKERGQFIIAGSHLEQTGADRYENVAHIWGPD
                     GEHYAHSKTHIFPAERGWYTQEGDKMAVFQLPFAKVGFNICYEAEIPECAATLAEQGA
                     ELILTPSATFTEQGFWRVRHCCHARCIENQIYLVHCCLGGNPGGPLPGCWARSSILSP
                     CDVVWKNPQGIIAEAHVNQEDVISGEINLDVLYENRLGGAATTFKDRRRKAGIYNIWP
                     SHIK"
     gene            complement(27214..28518)
                     /locus_tag="MOX77_001302"
     CDS             complement(27214..28518)
                     /locus_tag="MOX77_001302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3356884.1"
                     /translation="MKMTKLRWWIIGLVCVGTIVNYLSRSSLSVAAPAMMKELHFDEQ
                     QYSWVVSAFQLCYTIAQPITGYLMDVIGLKIGFFIFALLWSLINMAHALAGGWISLAF
                     LRGLMGLTEASAIPAGIKASAEWFPTKERGIAGGLFNIGTSIGAMLAPPLVVWAMLTF
                     ADSGIGTEMAFVITGGIGVLFAITWFLIYNSPNKHPWITHKELRYIEDGQESYLQDDN
                     KKPAVKEIVKKRNFWALAITRFLADPAWGTLSFWMPLYLINVMHLPLKEIAMFAWLPF
                     LAADFGCVAGGFLAKFFMEKMHMTTINARRCSFTIGAVLMISIGFVSITTNPYVAIAL
                     MSIGGFAHQTLSTVVITMSADLFKKNEVATVAGLAGSAAWMGQLSFNLFMGALVAIIG
                     YGPFFIALSLFDIIGAIILWVLIKDPEKHHPPMTEQPLASHR"
     gene            28923..30107
                     /gene="uxuA"
                     /locus_tag="MOX77_001303"
     CDS             28923..30107
                     /gene="uxuA"
                     /locus_tag="MOX77_001303"
                     /EC_number="4.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannonate dehydratase"
                     /protein_id="HCA3356885.1"
                     /translation="MKQTWRWYGPNDPVTLSDVRQAGATGVVTALHHIPNGEIWSVDE
                     IQKRKAIVEEAGLEWSVVESVPIHEDIKTHTGQYDLWIKNYQQTLRNLAQCGIYTVCY
                     NFMPVLDWTRTDLEYVLPDGSKALRFDQIEFAAFELHILKRPGAEADYTAEEIAQAER
                     RFATMSEEDKARLTRNIIAGLPGAEEGYTLDQFRQHLATYKDIDKAKLREHFAYFLKA
                     IIPVADEVGVRMAVHPDDPPRPILGLPRIVSTIEDMQWMVETVNSMANGFTMCTGSYG
                     VRADNDLVDIIKQFGPRIYFTHLRSTLREENPKTFHEAAHLHGDVDMYEVVKAIVEEE
                     HRRKAEGSDDLIPMRPDHGHQMLDDLKKKTNPGYSAIGRLKGLAEVRGVELAIQRAFF
                     SK"
     gene            30218..31690
                     /locus_tag="MOX77_001304"
     CDS             30218..31690
                     /locus_tag="MOX77_001304"
                     /EC_number="1.1.1.57"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructuronate reductase"
                     /protein_id="HCA3356886.1"
                     /translation="MEQNIATAQVSVARPNWDKSRLVSRIVHLGCGAFHRAHQALFTH
                     HLLEKSDSDWGICEVNLMPGNDARLIANLKAQNLLYTVAERGAESTELKIIGSMKEAL
                     HPEFDGHAGILAAMARPETAIVSLTVTEKGYCTDPASGELDVNNPLIQNDLAHPQQPK
                     SAIGYIVEALNMRREQGLKAFTVLSCDNVRENGHVAKAAVLGLAKARDAALAAWIADN
                     VTFPCTMVDRIVPAATEETLQLVADQLGVYDPCAIACEPFRQWVIEDNFVNGRPDWDT
                     VGAQFVADVVPFEMMKLRMLNGSHSFLAYLGYLGGYDTIADTMTNPAYRRAALALMLD
                     EQAPTLSMPEGTDLEGYANLLIARFTNPSLKHRTWQIAMDGSQKLPQRLLDPVRLHLQ
                     QGDDYRRLTLGVAGWMRYVGGVDEQGKTIDVVDPLLAQYQAIHQQYQTPEERVRGLLA
                     IESIFGNDLPKNHEFVQAVTDAYQQLLQNGAKATVEALAK"
     gene            31702..>32400
                     /locus_tag="MOX77_001305"
     CDS             31702..>32400
                     /locus_tag="MOX77_001305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucuronate isomerase"
                     /protein_id="HCA3356887.1"
                     /translation="MATFMTEDFLLKNDIARTLYHKYAAPMPIYDFHCHLSPQEIADD
                     RRFDNLGQIWLEGDHYKWRALRSAGVDESLITGKETSDYEKYMAWANTVPKTLGNPLY
                     HWTHLELRRPFGITGTLFGPDTAESIWTQCNEKLATPAFSARGIMQQMNVRMVGTTDD
                     PIDSLEYHHQIAADDSIDIEVAPSWRPDKVFKIELDGFVDYLGKLEAAADVSITRFDD
                     LRQALTRRLDHFAAC"
BASE COUNT         8763 a         7863 c         7578 g         8196 t
ORIGIN      
        1 aaaaggaaag attacttcag gctgccaacc agcgctttgc ggctatcttc taaggtcact
       61 acgcggctac agacatcttt gccaaactgc tggaaatctt tctcctggtt tttccattcg
      121 ttctggatag cggtttgcaa accaccgaga ctacccatca cgccctgtaa aggattgccg
      181 ccgcctttaa gcaccgcttt ggcgcccatt tcgttaatgc tgtcctgcaa aataccgccc
      241 atcgcctgat tcaccaactg ctgaccgtcg gcacgcacct ggtcgatagc cttatagtgg
      301 aacgtcaggc cgtccgtacg atgttcgata atgcggttca tttgcgcttt taattgcgca
      361 tcaagcttcg tcaggcggct gcgcatgttg ctgctttcgc ccacctcttt agcgatgatt
      421 ttatccagcg ccacgcggcc tttttcgacg cgcgatcggg cgccctcatc aatccacggc
      481 agcgcgcttc gcagttccgc ctggtaatct ttcgcctgct cgcgctgcgc ggcgctaagg
      541 gtgtactgct taccgttgta catcacattg ccgtccggcg tgatcaccag gttgccgttt
      601 tcacctttca cctgcaccgt ttgtggactc aggatcacat cgtcacgcgg cgtgacgctg
      661 catttgtaat ctgcatgagc ggccatcgcc gtaaacgtta gcactgccgc cagcagcgtt
      721 ttgcgcatca taactttccc tcaagacaaa gcgggccggc atttgccgac cctgtactta
      781 ttagtcccac caaacgtcga aaagttcgct ggttcggact tcttcaaggt tgcgcgcttc
      841 cagccactta cgcacaatcg cctgatgttc ttcggtacat ttaccgattt cctgcataca
      901 aatcagccct tcccaggcca ggtagccgct gccgtcaaac gccagtttat taggctcaat
      961 aacgtcatta ataaagtcat cgacagtctt atcgatctgc tcttcagatg taccttccgg
     1021 aaaacgccat gccaccgaaa atcctaattc ctggaattcg tcaatgtgca tttttttacg
     1081 cagacgacga ctacggttct ttgccattat ttcaccctct cgaacattaa gtcccatacg
     1141 ccatgaccaa gacgatggcc acgttgttca aatttcgtta ccgggcgcga ttccgggcgc
     1201 ggtacataat cattgctctc tgacagattt ttgtacccgt cgatagaaga catgacttca
     1261 agcatgtgtt ccgcatacgc ttcccagtcg gtcgccatat ggaaaacgcc gcccaatttc
     1321 agcttgctca ataccagttc agcaaacggc acctgaacga tacggcgttt attatgacgc
     1381 gctttatgcc acgggtcagg gaaaaagagc tgaaccatcg ataaagaatt gtcaggaatc
     1441 attttatgca acacttctac cgcgtcgtgg cacatgacgt gcaggttttc aacgccctct
     1501 tcatgagcgg acgccagaca cgcgccgaca ccgggtgaat gcacttcaat gccgaggaaa
     1561 ttctgctccg ggcgcgcttt cgccatcgcc acgagagacg cccccatgcc aaaaccaatc
     1621 tccagcgtca ccggcgcttc gcgaccaaac aacgtggcga aatctaccgg cgcttcgctg
     1681 aactcgacgc ccatcaccgg ccagtagttt tccagcgcgt gctcttgccc ctttgtcagt
     1741 cgcccctggc gacgaacaaa actacgaata cggcgcagcg ggcgaccgtt ttcatcaaat
     1801 tccggtgaaa tgacgtcgtt tttcataaaa gtgtagtctg ctgtgtttga gttctgaaaa
     1861 cgggcattat ccaaagttag ttgccggatg caagcatgaa gcgcactgcg gaaagttccg
     1921 gtttacaccc tgcggcctct gtgctgcaat cttgcccccg gcaataatga atgagtttcc
     1981 atgcaagcgt ctcaattttc agcccaggtt ctggactggt acgacaaata cgggcggaaa
     2041 acgctgccct ggcaaattaa caagacgcct tacaaagtat ggctctcgga agtcatgttg
     2101 caacaaacgc aggtgacgac ggtgattcct tactttgagc gatttatggc gcgctttccg
     2161 acggtaacgg atttagcgaa tgcgccgctg gatgaagtgc tccatttatg gaccgggctc
     2221 ggctattacg cccgcgcgcg taatttgcat aaagcggcgc aacaggtagc aacgcttcac
     2281 ggtggagaat tcccgcaaac ttttgccgaa atcgccgcgc tccccggcgt cgggcgttca
     2341 accgccggcg cgattctctc cctcgcgtta ggtaaacatt atccgattct tgatggaaac
     2401 gttaaacgtg tgctggctcg ctgttatgct gttagcggct ggcctggaaa aaaagaggtg
     2461 gagaatacgc tgtggacgct gagcgagcaa gtgacgcccg cacgcggcgt ggagcgtttt
     2521 aatcaggcga tgatggatct gggcgcgatg gtttgtacgc gttcaaagcc aaagtgcacc
     2581 ctgtgtccgc tgcaaaacgg ttgtatcgcc gctgcgcatg aaagctggtc acgctatccg
     2641 ggcaagaaac cgaaacagac gttgccggag cggacgggtt actttttatt gttacagcat
     2701 aatcaggaga ttttcctggc gcagcgccct cccagcggtt tatggggcgg actctactgc
     2761 tttccgcagt tcgccagcga agatgaatta cgtgaatggc tggcgcaacg gcatgttaac
     2821 gctgataatt tgacccagct taacgcgttt cgccacacat ttagccattt ccacctggat
     2881 attgtgccta tgtggcttcc cgtgtcgtca ctggacgcct gcatggatga aggcggcgcg
     2941 ctctggtata acttagcgca accgccgtca gtcggactgg cggcccccgt ggagcgcttg
     3001 ttacagcagt tacgtaccgg agcgccagtt taacgccccg gtcgatgaag aggatgactt
     3061 atgagcagaa cgattttttg tacttacctg caacgcgacg ctgaagggca agattttcag
     3121 ctctaccctg gcgaactagg aaaacgtatc tataacgaga tctctaagga cgcatgggcg
     3181 cagtggcagc ataagcagac catgttgatt aacgagaaaa agctcaacat gatgaacgcc
     3241 gagcaccgta aactgctgga acaggagatg gtgagcttcc tgttcgaagg caaagacgtt
     3301 catatcgaag gttatacgcc ggaagataaa aaataggccc gttgctgaat gaggctgcgc
     3361 ttattcggcc tgtgagttat gccggataag cccttagcgc cgctgcccgg caacatggca
     3421 taacgacaac acaacatgca ctcccggaat gatgaaaaaa ttactcgcgc ttgctgttat
     3481 tgcgccgttg ctcatctcct gctccagttc gaccaaaaaa ggcgagacgt ataatgaagc
     3541 ctgggtcaag gataccaacg gctttgatat tttgatgggg caatttgcca acaatattga
     3601 aaatctgtgg ggatataagg aagtcctgat cgccgggccg aaagactacg tcaaatatac
     3661 cgatcagttc cagacccgta gccacatcaa ctttgatgat gggaccatta ccgttgaaac
     3721 catcgccggg acggaaccta ccgcacatct gcgccgggcc attattaaaa cgttgctcat
     3781 gggtgacgac ccaacctccg tcgatcttta ctccgatgtc gatgacataa aaatttctaa
     3841 agaacccttc ctgtatggtc aggtcctcga caataccggc cagcctattc gctgggaagg
     3901 ccgcgccacg acattcgcgg attacttgct gaaaacgcgg ctcaaaagcc gcagtaacgg
     3961 cctgcgtatt atttacagcg tcaccattaa tctggtgccg aaccaccttg ataaacgcgc
     4021 gcataaatac attggcatgg tacgccaggc ctcccgtaaa tacggcgttg acgagtcgct
     4081 gattctggcg attatgcaaa cggagtcctc gtttaacccg tatgcggtca gccacgcgga
     4141 tgcgctgggc ctgatgcagg tagtgcaaca cagcgccggg aaagatgttt tccgttctca
     4201 gggtaagtcc ggcacgccaa gccgtaactt cctgttcgac cccgccagca atatcgatac
     4261 cggcacagcg tatctggcga tgttgaataa tgtctatctg agcggtatcg agaatccgac
     4321 gtcgcggcgc tatgcggtca ttactgccta taatggcggc gcaggcagcg tattacgcat
     4381 attctcgaac gataagattc aggccgcgaa tatgattaac cgcatgtcgc cgggggatgt
     4441 gtaccagata ttaaccaccc gacatccatc tgcggagtcg cgccgctatc tgtataaggt
     4501 gaattccgcc cagcgatcgt atcgccgccg ataaaccatc gcatcccgcc tctggccagc
     4561 aaatgacaga ggcgggaaag gcaaaagtgt taactccgtc acccttttgc tttgcaatca
     4621 gaaattgttt gcaaatattt gtcacaggta acaaaaaaag cccgcctctc attgatagaa
     4681 tcacaccaaa tcacaacggc aaatgtgcct tttaaaacat tcatccgctc tcaggtgtga
     4741 ggaaattaac atgaatctta agctgcagct taaaatactc tcttttctgc agttctgtct
     4801 gtggggaagc tggctcacta ccctgggctc gtatatgttc gtcaccttaa aatttgacgg
     4861 cgcatctatt ggcgcagttt atagttcact ggggattgct gccgtcttta tgccgacctt
     4921 gctaggcatt gtggctgaca aatggctgag cgcgaaatgg gtctatgccc tgtgtcatgt
     4981 cgtcggcgcc atcacgctat tcatggccgc ggaagtcact acgcctgggg cgatgttctt
     5041 tgtgatcctg cttaactcgt tggcttatat gccgacgttg ggcttgatca atactatatc
     5101 gtattaccgc ctgcagtctg ccggcatgga tattgtgact gactttccgc ctatccgtat
     5161 ctggggcacc atcggcttta ttctggcgat gtggggcgtg agtttctccg gtttcgagct
     5221 gagccatatg cagctttata tcggcgcgac gctttccgtt ctgctggtac tgtttacctt
     5281 taccctgccg cacattccgg tggcgaacca acagaaaaac cagagctgga catcaatgct
     5341 gggccttgac gcttttgcgc tgtttaaaaa caagcggatg gcgattttct tcatcttctc
     5401 catgatgctg ggcgcggaac tgcagatcac caacatgttt ggcaacacct tcctgcatag
     5461 ctttgataaa gatccgctat tcgccagtag ctttatcgtg cagcacgcct cggtgatgat
     5521 gtcgatttcg cagatttctg aaacgttatt catcctgacc attccgttct tcctgagccg
     5581 ttatggtatt aagaacgtta tgcttatcag tattgtggcg tggatgctgc gtttcggcct
     5641 gttcgcttat ggcgacccga cgccgttcgg taccgttctg ctggtattgc cgatgattgt
     5701 gtacggctgc gccttcgact tcttcaacat ttctggctcg gtgtttgtcg aaaaagaagt
     5761 acgcccggaa atccgcgcca gcgcgcaggg gatgttcctg atgatgacca atggcttcgg
     5821 ctgtatcctt ggcggcattg tgagcggtaa agtggtggag tattacactc aaaacggcat
     5881 taccgactgg cagaccgtgt ggctcatctt cgcaggctac tcgctggtgc tggcctttgc
     5941 gttcgtagcc ttgttcaaat acaaacacgt tcgcgttccg gcaagttcgc aacccgttgc
     6001 acattaatcc ttgccctgtt tcgcaggccg gataaggcgt aaatgcctta tccggcctgc
     6061 aggcaacgtt actttaaaac atatccatac aagcgtttaa ttccatcggc atcggtctcg
     6121 ctatataccc cctgcaattc cggcgaaaaa ccgagcaaca gattgatgcc ctcttccagc
     6181 gccaaaaaat aacgctgcgc cgcgccaccc caaatctccc ccggcaccac gcacagtacg
     6241 cccggcgggt atggcaatgc cccctcggca gcaatacgcc cgcccgcctc gctgatacgc
     6301 accagctcta catcgccgcg aataaaggcg ctgttggcat cctgcgggtt catcgccaca
     6361 tgcggcaggc tttctttgcg aaacatcgct ttttgcagat ccttaacgtc aaagctaacg
     6421 tacaggttgt gcatctcctg acatagctca cgcagggtgt aatcgcggta gcgcaccggg
     6481 tatttctgaa aaaccgtcgg caatacatcc gcaagcggcg tatcgtcttc aatgtgccgt
     6541 tcaaattgcg ccagcatcgc gaccagtcgc gccagtttct cttcgctctc ggcgggtgtc
     6601 agcaagaata gaatcgagtt gagatcgcac ttctcaggca caataccgtt ctcacgcaga
     6661 tagtgggcga gaatggtcgc cgggatgccg aattcggtgt accgcccact atcggcatca
     6721 atacctggcg tggtcagtaa cagtttacaa ggatcgacaa aatactggtc atccgcataa
     6781 ccctcaaagc catgccattt cgccccgggc tcaaaactga agaaacgacg attgctggca
     6841 atggtctccg tcggatatgc ctgccacggc ttgccgtcaa ccaccagtgg gataaagggc
     6901 tgaagcagtt tgcaacgggc gagaatggct ttacgcgcgt caatgcccag cgcaacgcac
     6961 tccgcccaca ggcggcgacc gctctcccct tcgtggattt tggcattgac atccagcgcc
     7021 gcaaacagcg ggtagaacgg actggttgaa gcatgcaaca tgaaggcgtt tgtgcgggca
     7081 aaaacgcgcc tggccgcgaa tatggttatc ttttttgtgg atctgcgagg tttgtgagaa
     7141 ccccgcctgt tgcttatgta ccgattgggt cacaaagatc ccagggtcgt tttcattaag
     7201 ctccagccgc aacggcgagg tatccgccat catattgata aactgctcat agcctaccca
     7261 cgcggagtca aacagaatgt aatcgcagag atgcccgatt ttatccacca cctgacgggc
     7321 gttgtaaata gtgccgtcat aggtacccag ctgaatgatc gccaggcgga acggacgcgg
     7381 cgcatcggcg ctttccggca tcacgtcacg aatctggtcg cgcaggtacg tttcatcaaa
     7441 acagtgcgca tcaataccac cgataaaacc aaacgggtta cgcgccgcct caagatagac
     7501 cggcgtcgcc ccggcctgaa tcagggcgcc gtggtggttg gatttgtgat tatttcgatc
     7561 aaacagcacc agatcgccgc gcgtcagcaa ggcgttggtg accactttat tcgccgccga
     7621 agttccattc agcacaaagt aggttttatc cgcattaaac acttttgccg caaatttctg
     7681 cgcgtgtttg gcagaacctt catgtattag cagatcgcca agtttcacat cggcgttaca
     7741 catatccgca cgaaacaggt tttcaccaaa aaagtcataa aaatggcggc ctgcgggatg
     7801 ttttctaaaa aactcgccat gctggtgccc cgggcaagca aaggtactat tccccatgtc
     7861 gacatactgg gtcagggtgc cataaaaggg cggcagaagt tccgcttcgt agcgacaggc
     7921 agcgttttcc agctccagcc attcctgcgc gttcccgccg attaccgccg taacgccgac
     7981 aggcgcgctg acgggttcat ccgcaagcat aaataccggc aggtgaaaac cggtgcgttt
     8041 aagcaacgcc agaataccgc tacggctgtc ggcagtggta atgacgactg cggccacatc
     8101 ggtaaagtcg gtactttcca gtgccactac gtttcggtgg gtggagagac gggggatgag
     8161 ttcaccgctg gcggcaatat tcattgattt cataagcgca aatacccgtt tcgggagtag
     8221 agtaaccccg gacaaggccg atgccttgcc caacgagatg ccgggtcaaa ctggatacca
     8281 gctccgaccg ccagacatca gtaaaaacag actgtttctg attttactgt tgtcctgcag
     8341 tgagcgtgcg ctgccctcac cgcatagcgg ggatgacaaa aaaaaggaaa gaaaggggca
     8401 aacctcgcgc agtcaggcga cagtgaagac aatataaagg cgctatgttc atcccggcga
     8461 gccccatgct ggcaggagaa atttcgcgca atcatggcac ctttcaccag acggcgcaag
     8521 gtaaaatcag cgctctatac gtcacagata atcaagctat taacagctta atcgcgtgat
     8581 aataaggcaa tttgaaagac aaataacagg agtcattgtg gtaattggac cttttattaa
     8641 cgctggcgca attttattcg gcggcgttat tggcgcgctg ttaagtcagc gtctgccaga
     8701 acggattcgc gtctcaatga cgtctatttt tggtctgtgc tctctgggta ttggcattct
     8761 gctggtgatg aagtgcgcta atcttccggt gatggtgctg gcgacgctgg tcggcgcgct
     8821 tatcggcgag ttttgtttgc tggaaaaagg cattaatggc gcagtcgcga aaatccaaca
     8881 attatttatg gcatcgggta agaagccgac acacgactct tttattcaaa gttacgtcgc
     8941 tatcattgta cttttttgcg ccagcggcac cggtattttc ggcgcgatgc atgaagggat
     9001 gaccggcgat ccaaacattt tgatcgctaa atcttttctg gattttttta ctgccattat
     9061 tttcgcctgt tcgcttggca tcgccgtttc ggcgatttgc gcaccgatgt tgattatcca
     9121 gttaacgctt gccgcctgcg ccaccctcat tcttccactg actacgccgg caatgatggg
     9181 cgactttagc gccgtgggcg ggctgctgct ggtggcaacc ggcttgcgtg tatgtggaat
     9241 caaaatgttt ccggtagtga atatgctccc ggcgctgttg ctggcgatgc cgatctccgc
     9301 cgcatgggcg atgttttttg cctgactctg cgtgcaataa caacaaagtg gtgatagatt
     9361 gtgcagtcta cgttgatttg aagaaatttc gttgacgaag cgaggcgatt acggtttaat
     9421 gcgcctcgtt gcccggatag ctcagtcggt agagcagggg attgaaaatc cccgtgtcct
     9481 tggttcgatt ccgagtccgg gcaccacctt tcctttttta cacttcctta taaatcccca
     9541 tgtgttttta attcaatgag ttagtggaaa aactcttccc agcgaatttc tatttatccg
     9601 cccaaatcag gggcttttgg tggtcaactc ggtgctcagt tcggttagat aaaggagtgc
     9661 cctcaaatgg cattaaccga caaacaagca cgtagtgcaa agccttctga taaaccctat
     9721 aaactcgttg atacactcgg cctgtatctt ctggtaaaac ccaacgattt tcgtatctgg
     9781 tatttcaaat atcgttttga gggaaaagag tccggggtat cattcggtcc ttatcccgaa
     9841 acctcattcg cccttgtccg cgaaaaacgc gatgccaccc ggcgcgtact aaaatccggc
     9901 tttacccctt ctcagcagcg ccgggacgaa aaaaggttgt caatgaatta gaacgttcca
     9961 gtacatcgct agattgtggc ataccggctg cctgaaactc tggtcagaaa gtcactccaa
    10021 taaaattcct gtctgcctcc aacactacgt tttccctgat atcggcgcaa tgggtatttc
    10081 ggcgacttaa accctacatc tcgcacgact ggtcagagac attgatgata aaggtgtgca
    10141 tgttgttgcc ggacgtatac gccagcatct gaccaaaatt atgcgccacg ccgtacagca
    10201 gggaacgatt aaatataatc cggcattcga tctggatggc gttgtaactc ctgttataac
    10261 ccagcatcac cccgcccttc ccctgaaacg cctgcctgaa ttgctgggct atatcgacac
    10321 ctacaacaag gccggatacc ggctatcaac actttccggt atgccgcact gccaggacaa
    10381 caccaaacgt gagttcacac atctggttag agtttctctg gcttaccgca aaattgagtg
    10441 ggaacacgtt tcaacaggca cttcaggtgc tgatgactga cgtgcgccgc tggaagcata
    10501 agagtaaatc cacagcattc cgccttaatg gtgggatgct gtttttgtcc gggaacggag
    10561 acaaaaagcc cgtgccagca atgagttacg tctgttacgt ttcatatatg ggagatggtg
    10621 gatgccggaa actttggcgg tagcgtgcct gaagcggctg tcctccccat tgccactgcc
    10681 acgagcgtac cgtggttcct ttttcgccaa taaatccaga ataaggttat gtcacaaaat
    10741 ggcctgcgtt ttacgctgga tgtggacgga ttaacgccgg cggcaaccac tgtcgtcagc
    10801 ttcaccctcc agaggtatca acagttcaac aggtgcaagc tggaataaga atgaaagact
    10861 aaaaacacca gatgatgcat ccaatgatag cattaaatca ggccatggtt cacaggagga
    10921 aatattacca tcttaccttt acttaataag atcattttta atgaaaatag gtttatcaat
    10981 aaaacaaaaa atattcttga cagcgaaatt gcatcttttc ttgcatcttc aagtcaggaa
    11041 ggatttgatt tagtggatga taacaataat tatctttttg atcgcacagt taaaaaaatt
    11101 aggcgcatta gctgataatg aaatgtttgg tttggaacct gcatacattt ttggcgggga
    11161 aataaaaaag ttttctttat tcaaaaaatt gaattttctg atggtaagat tatcattgat
    11221 aatgaatctg tgtcatggtc actaaaaaat ttagtacaca aacagaatac tcatgctata
    11281 tccaaattca tagaaaaaag aaagagaaac tttatctaat aacaaatttt aaaaaaatca
    11341 gcagtgcgtt gagaaaacca atacatacat tcccagatgg aattatgcca tcaaatagaa
    11401 gagaaaataa attaattaat atcctgaatt cgcataaaaa agattcagag tttagatttt
    11461 tattaaaaga attaattagt tatattggag ttacagtaag tacaatgttc ctatcactta
    11521 ttaactccta ataaataatt attcttattt tccaggataa tctcacaact tattatttag
    11581 taatgaagct atggagaaaa atgcccacag ccgcccgact caacgataaa ggcacccagt
    11641 acgacgatta ttacgagacc gtgagtatag cggattcccc cacggtattt attgacggcc
    11701 tgtccgttgc cagaatgggt gatgcggtgg actgtggcgg gatggttaat atgactcgaa
    11761 tgaaatcagg taaggcatca aaggttagaa aagttgacag agtcggaaaa caggggttcg
    11821 agcttcatca tatagatgaa gttgcaaata gaggcgatgt ttacaatgta gacaatcccc
    11881 gtgtgaacac catattgaca tacacaggcg atttatgaaa ttaaaagaaa atattagtga
    11941 ttatacggaa agtgagttca ttgatttctt gagagtgata ttttctgaaa acgagtcgga
    12001 tacagatgaa acattagatc cattacttga gtattttgag aagatcactg aatacccagg
    12061 tggaacagat cttatctatt atcctgaaac ggaaagtgat ggaacacctg agggtattct
    12121 gaacataatt aaagaatgga gagaatctca aggattgcct tgttttaaga aaagtaaatg
    12181 aaaatcaggt gtaggggaat gcccagagtt actggcgcag tttagtaaat cgaatcaaac
    12241 tttgataaaa agaggtcgag cgccttactc cttgataagg caacaagtcg gaggtaggtg
    12301 gacttatgaa attccccacg ttggaaagat ccagtatgga ggaatggtgt ttgatgttga
    12361 taaccttatg ataaacactc ctaaaaatca tatacgattg cataagtaag gtttgaggtg
    12421 aaaatggaac taaaaaataa ccttgaagat tatacagaag atgagtttat cgagttttta
    12481 aataattttt ttgagcctcc tgaagagttg actggagatg aattatcgaa gtttattgat
    12541 aatcttctac gccattttaa taaaattact caacaccctg atggcgggga tttgatattt
    12601 tatccatcag aggaacgaga agatagtcct gaaggagtta ttgaagagct aaaacgctgg
    12661 cggaagtctc agagactccc ctgttttaag gaaaataagt agcgatcagt ggtgaggagt
    12721 ttgtcaaccg gaaccgggat gataatgcag tgaccgttaa aaggcaaaaa tatgtcagtt
    12781 aagggagtaa ctatcaaagg cataattctg agtgttttta cactgaaccg tagtgccaga
    12841 ggatatattt atctgacgcg aatcgtatga agtgatagct ttacgtacgg tttgtgagag
    12901 gctgtaggga aagatcctac ggcctactca ctaagagtct atttttgtac attgtttcat
    12961 gttctggaaa cacgataaag tatgagcctg acgaactctc gcccgctaaa gttccacgct
    13021 ggaacctgac ggccaggagt cggacatctt tgcggtggcg aatttacatc cgttcaaaaa
    13081 aatctaatgt aagagataga tgatatggct aaatatatat tcctctttat ctggattgtg
    13141 acattttctg tcagcgctgg tgagcgagga tattatttat tcgtatgggg taaccctgaa
    13201 gggaaggaat attttaaaga atatagagct gatgaaagga tatatgcggt caataaatcc
    13261 tgttggaatg aaagagcggg gaactctata cgaatagtat atgttgatac ttatcctcat
    13321 ggaataaccg attctttaat taattccttt ttggctggga ataataaatc cataataaat
    13381 attagagtat cattgagtaa ttttagtgac gatcaaatac ttcatggttt tgatggcatg
    13441 ttaataataa ataaaaaaaa tgaagagatc gagattttta ctattccagt agttggtgct
    13501 aattactcat ataaagataa atttttagta aacgtccatg attttgaatt atttgatgga
    13561 aagatctgta acgctttgat gcctatagat agttattttt caccataaga agggttgttg
    13621 aataaatcaa attaccctgt accgtcaaat gtacctaccg tcgacacggg taacggatct
    13681 acatcttctg ggaagcaaaa ggcaacaaca aaagatgcgg aacaattgcc gacagaggga
    13741 aataaaatcg tggagggcct atagctacgg gctgagatta tctgttcatg atatgtatgg
    13801 cacacacgtt accataacat cattgaatgt atcaaaaatg cctacgcagc aaacgggcat
    13861 tacaggatgc aggatcattt tagtcttgac agtaatgata taacacattg gctttatagc
    13921 cattgggatg tctttaaaat ttggtttgta cttcaacatt atgagaaaga ggggtatgag
    13981 tttaagccat ttatacacaa aatcattcta gatgcattgc ggcggcaagg gaagaaatcc
    14041 ccgggagcat agataactct gtgaccgggg tttctgagcg cagccaacaa agaggcagct
    14101 taaaggatga agtgtatatt acagaaataa ataccaccgt aaaaatctca ggtgtcagag
    14161 gatattactc ctgatttggt atgtattgtc ggcaaggtat ttgtttgtat tgttaacata
    14221 gcatagtccg atattttgca taaggaatgt gattgtgtca tgggtaataa cgaaaaaatt
    14281 catttatatt gtgacaatcg ccatattatt ttgttctgtt gttatatact tatggtcagg
    14341 cagaccagta gaaatcgtgg atgtccatta ttattcaggt aaagacatta acattcttgc
    14401 caggcatttc cccattacgg acaggggaaa gctgaattgg tggagagaaa atgaaagaaa
    14461 aattctggaa aaatataatc tccctaaaaa taatttttcg gtatatatat gggattttgg
    14521 tgacggttat caaaaattat cgccctatga tgccgaggat gaattttatt gttttcctga
    14581 tataaaatca gaatcaaaat gtatcaaaaa agatatatat atgcctgctg aatctggtgg
    14641 taattattat cggatgtttt tattttctgg ttctggttat ttttatcaac cgaaaaaaga
    14701 tgatgataag cttatcgaat caaataactc caccaagctc aaccaggata aaagccatga
    14761 aaaaaatcac tatcattagt ttgtttctta tcttaccttt gaaagcaaat attattccat
    14821 ctatatcatt accagataaa ttaagtgagt cgaaatattc tgtaagaatg cttcgcattg
    14881 atgcaaggat tgactatcgc gtggaaaccc ctgagtgtaa gaacgtaaaa tttaatgatt
    14941 actttttctt aaatgaaaat attaaagatc tcaatgataa aaaccatgtt tatgatcctg
    15001 agttttatcc aattacatta tggagttgtt catatagcag agaggtgtat gatgttggtg
    15061 agtatggctc acatatacag cacatcgttt ttgataaaaa taaaaacata tgggtgatag
    15121 atgatgatgc aacaaaaaca aataatgaat ttaaaccatc atttttatat aatataagtt
    15181 cagtgaatgc acagggtttc ttaatcattg atgagaatat ttcggagatg gataaaacaa
    15241 tatacgaaga tgataacata aaaaagaaat tttatttttg tatgattgat ggctcacatg
    15301 ctttatgcgg cgcaggcagt ttaatcagaa aaatagataa tcagttgatt gattttacgc
    15361 catacatatt aaagtcactg gaaagtatgg agattggcgt taattaaaaa agaatatccg
    15421 atattaatat actctaaata atttgagtta caggaatgca gtaaatttcc aggagtctgg
    15481 atgttggata ctgagatgag cgtatcatta atgacgaggt tactctgcgt tatttaagtg
    15541 gttcatgccg ctttagttct gtctttgaca cagacgagtg gcttaaaact ccaggtgaga
    15601 gcaattatca tttttctgtt ccacttgata atatgtatca tttttatcag gtcagcatcg
    15661 ttatagtata cgtatagtgg attatttaat cgttgataga aattagcttt caaaacaaga
    15721 aatttactat catgcgctac gcctgttgac gtttacgcct aataagatat gccagaaaac
    15781 agataatggc agggttattc ttcagcataa aattaactgt cataataatg gtgatggcga
    15841 cacataaaga aaaaccatga aatataatga aggcacgttt aaatatatgc tcaaaaaaat
    15901 cattggcgct ctcgcgtcaa ttattggcgg gctacttgct tttttatgtg tctattggtt
    15961 atttcgtctg gatacctgga cagaacgagg ggtttatata ggcatctcta tatttttggc
    16021 tcttattctc ataaaaatac tatcattttt caatgatgaa tagacggcag gaaaaaccgt
    16081 gagtgtctca caccgattct tgctggatgt caaatttcga aagcctgccc tgctgatacc
    16141 ctatcaagaa gaaactaacc caacaattat cagacagtag caggaatcga acccacacca
    16201 ggcaaatcac gtagataatt ctgtaagggt tagttttgtg gtggtcttga taaacggtaa
    16261 aaaatagctt taacagtcca ttagcccaaa ggacttctcc gagtccgggc tccaaccatt
    16321 cagatgcgga cgccctatgg cgtccgtttt tatttataaa atcaacaggt taccccgccc
    16381 ttcatgttca ctactgttca ttaaaatata ctggcagcca ccgctttttg tgggtaaaaa
    16441 cgccggtttt ctgcatagcg catgacgcta ttgaaacgtt atttagcaaa tcctgtctga
    16501 gccagaaatt aagtctctgt taacctgcgc tattacagaa aatcatagaa cagtcgtctc
    16561 aaaagaatat cgtcctgaag gacgagaact cacggcattt tcaggagatg agtcaaccgc
    16621 gacagaaaaa aatcatatta ataattttaa attatttttt ataaaaccag acaggattta
    16681 aattaaaatc atttattttc aagatgttat aaaaaatacc gcaacatacg tcacattatt
    16741 aacatgtgaa tgattgtgtt aaccgaatgt aaattgtatg tttcaacata ccactatttt
    16801 actgcgcccc gacgcgctca tccggatgga aggagataac atgtcagcct tatcaactac
    16861 tggccataat gacgggatca ctctccattg cttacagagc attgcgcaac tcattcctct
    16921 gtcgtcggcg gttttttatc gtgttaatgc ttatttaaag ccggaagcct atgttttaca
    16981 taatatttct aatagcacac accaacaata tctggagcat tttcaaccat tagacccgct
    17041 attgccttcc cgattcggcc aacaggttat tacagtagcg acgatgacgc ccggcatctg
    17101 tgctcgtcat cgccattatt atcatgaatt tatgctacct aatcatgtgt gcgacatgat
    17161 tgagatcttt attcgtcggg gccatcgtat tatcgcgggc atttcattaa tgcgcgatat
    17221 acctttttcc agcgaagagc gtttgcgagc ccaggcagta caaccattat tgggactggc
    17281 aattcatgat tctcttcagg aagacaacga tctggcgtca atattgaccg ccaaagagcg
    17341 tgaaattgtg ggaatggtct gcgaaggggc cagcaacaaa ttgattgccc gtcagttgaa
    17401 tatttctctc tcaacagtga aaacgcattt acgtaatatt tttgctaaaa cagaagtgat
    17461 aaatcgcacg gaactggttt cccgaaccag aatgtcctcg gtacaacatt cactgaatat
    17521 gtgaaagcgt tctttttaac ccgcgtcaat tgcgggtctt ttccccatat gtcatatatg
    17581 cctgaattaa taccaccctc tgagctgatg ccgcaataaa atgtcatatt atctggcgtc
    17641 ggcatcctgt tgcagccatt gattcatggc ctgattgatc atatttatca cactaagcag
    17701 aagaacacgc tggtgccgct caagccgcag ataacggcgc agcggcggca ttttacaaac
    17761 cacttcgcta gcagcccata gctcaatgct gcaataccat tccttatgat gtaaaaccag
    17821 agtaaaccga cgataatcca gttcactcag agcctgttgt aaattgggga aacgattaag
    17881 atagctaatc agcccggcgg tacttttact gccagtaaaa atgacgggat aacgtttcag
    17941 ccatccgggc tgatgagcgc gaattttgcc ctgcaaagga taattgattg tgcctttcac
    18001 cctgaattca caactgtgaa tactggccat gaataaccgt ttttgctgaa catggcagat
    18061 aacctgggta aatgcattca gatgcagcac ggcgctatgt tcggtcaatt tttcacaacg
    18121 ccagccgctc aaatcacgta acaccatatt cattaatgcg ttcttaaacc aggggacgga
    18181 ggacatctgg cgtcatctct tcattgtttc gcttttcata attgcccatc gcccgttcca
    18241 cgacctcttc taccggaagc gggaggaaag gattaacccg ttgcacacat aatgtccaga
    18301 ataaggcata ggcggcagtc aatccaagca taataccgaa tggtataagt acatcccgac
    18361 tgttcattcc tggaggcgcg atattaataa tggcgataat aatacccacg ctcgaaataa
    18421 tctgaggtaa gggaaaccag ggggcccggt aagcgcgtgg taaatcgggg cgccgaatac
    18481 gtaagataac gaccgataac gttaccagca gataagctac tccccaggcg cagaccgcag
    18541 cgaggatcag cggaacaatg tggtcgatat caccgttcag ataccaggca tgtaaacagg
    18601 gaatcgcaac accgaatgcg atggcgatga ccggtgtttt aaagcggggg tgcaaccagg
    18661 tcagaaaccg cggcaaagcg ccgtccagcg ccatgccgta tataatacgc ggtactgccg
    18721 ccattagcgt attaatcgtc gcacatcccg ctaacaacaa ccccacgccc agccagtatt
    18781 gcccgacatg tcccatgaca cgattggcaa aggcgggaat agccatcggc gtatccagta
    18841 aaaagatatg gtttgccgca tcgaccacca cattatttac ctgccggtta atcgcagcgc
    18901 catagaggaa catacaacct gccaccgcta aaaggccaag cgccatcgct ctgggaatcg
    18961 tacgatgcgc ttttttaatt tccggcgcca ttggcgtgac cagttcacaa ccgacgaaca
    19021 taaacatcgc catgcctata taaccaaaca gaccagaaag attactgaca tcaagcggtg
    19081 cgccaaacca cccggaatga tgagtgaccg gggataacag gatcccgcat aaaccgaaga
    19141 tggtcagggt agtccacata ccgaatgtaa gaaacacttc caccttgcca aatacttcaa
    19201 caccaatggc attcagtatc ccgaaaacca ctaccatgcc gacgccaacc atccaggtat
    19261 tgtgctgcat ggccacgtgt tcgctaacgg actcaaagtt caccagcgcc atgacgccag
    19321 cgagaatcgt ttctgccgtg ccggcaaaaa tgtgtacgat caggtaagcg caaagcgcac
    19381 cggtgatagc gaaaaaacgc cccatcccgc aggagatata gtcgtagacg gagccagtcg
    19441 tgggaatgag cgttgccgct tcggcaaagg tggtaatctg cgcttgcatc ataataaatg
    19501 ccagtaatac cgcaagggca aaggtatctc cccctgagcc aaaaccactg gtcacggtca
    19561 ggatcaccgg gcttgccata atcagcccga cggagctggc aagcgtcgtg gggaaaccaa
    19621 taacgccacg ttcaagatgg ctggcaagtc tgtttttaaa catggtcaac ctcttcacta
    19681 ttattacaac aataaattac cgctccggaa taacgcttat ttatggcagg cagcgcatct
    19741 aacaggtatc gtcctgaaga gggataacgg taaataacgt tgtgacgccg tccccgcatg
    19801 cgctaatagc aagtggggag cgcgttattc tccccagtga tgccaacgct actgacgaac
    19861 aattaaaggg ttcaaccctg tttatggctt tcaacgtttg ccagataatg ttttacaaaa
    19921 cggggcgtta aaactttcca tgccacttcg gttccctgtt caacaaacca actatcgccc
    19981 ggtgaaaaac gtatcggttc ctgacccaca acagtgagtt ccacttcccc ttccagcacg
    20041 gttgcgtgct cggtaaaggg ataaatcata gtgaaaccgc cgcgggtcga tgaaaacagt
    20101 ccacaggtaa atacgtcctc aggtttaccg taaatcatcg caacggcgac ctggggacgc
    20161 cttctgttgg caacgcccct aacaggctga cactcccgac tggctgtaat tcaggaacag
    20221 gttgattgag tttaaaagcg tgcattaatg ttctcctggt taattccggc ctttccagaa
    20281 accggctgtt tgatgtatca gttttcccgc actgaccagc aatagacgta gactgtcgcg
    20341 accataaatt gtcgcgtggg gaatgctact catcagacga taccgctcgg aaccgccatt
    20401 tattccttcg gccaggattt tgcatacaat atgggaaggc gtgacgccaa atccggaata
    20461 accctgaaca taaaaaacat tattgtgctc acgaagcgtg ccaatctgcg gaaacagatt
    20521 cgcgctacag gccatcggtc cgccccaggc aaaatcgatt ttaacgtctt tcaaataagg
    20581 aaagacctcc gtcaacagag tgcggttcca ggcagcaaaa tcgtgcgggg tatattcaag
    20641 aaaccttgtg gcgctgccaa acagcagacg gttttctttt gtgagacggt agtaatttat
    20701 caccgggcgg atatcgctaa aagccccgcg caagggactg atccgctcaa caagctcgct
    20761 ggagagaggt tctgtagaga cctgataaga ataagtaacc agcgttttct tataaatttc
    20821 tggttccaga ttattgagaa aactatcaca ggcccacagc aatttggctg cttttacgct
    20881 gcccatcgca gtacgtaccc gcacagtttt accgtaactg acctcaacca caggtgaata
    20941 ttcgaatatc ttccccccca gcgaattcgc agcctgagcg gagcccagca ataaattcag
    21001 cgagtggaca tgccctcccc ccatatgctt gagaacaccg cagtagacgt cggaaccgat
    21061 aacctgctgc acgtctttac cggtatagag ttcaatatcg tcttccggcg tagcggcttt
    21121 gaattctttt tcccattgtt gcagcgtttt taactgccgc tggttgtagg ccagataacc
    21181 atatccgggg acaaaatcag catcaatatg gtatttacga attcgctccc gaataatacc
    21241 cgcgccgagg ttcgagattt taaacagcgt ctccattccc gctgcgccta catatttttt
    21301 aacggcttcg atgtcgtgac ctataccggc catcacctga ccgccgtttc gcccggtgcc
    21361 gccataccca agatggcggg cttccagaac gacaacatta gtgatcccct gctccgccag
    21421 ttccagcgcg gtattgatgc ctgaaaagcc accgccaatg atcaccacat cggcatcaat
    21481 atcgtcttgc agagcaggaa aatgcaacgg gtattttttc gtcgcgccgt agtaattcaa
    21541 cgcatcgatt tttgtattca tcgcgttacc ttgtcatcac gcttgaccaa gaccgctatc
    21601 acagcacggt aacgttttac aaaatatcgt ccggaagaat gacgttcttt ggaacgatat
    21661 tcagttccag gcaagtatgt tgagatggaa aaacgtacat tcctgaccta caggcacttc
    21721 tgatgagcga cgtgacatta cttgccgaag taacgacttt tttacgccaa cgacacggac
    21781 aatttattgc aggtgaacgt caggccggaa acggcacgaa cttctcggtc actaacccag
    21841 ccaccggcaa aatcatcgcc gacgttgtgt cgacaacccc tgcgcaggca aaagaggcca
    21901 tgcagagcgc cagacgggcg tttgatgtct ggcgtaaaat gccaacgtta caacgcggcg
    21961 cattactgct gaaactggct gatactcttg ccgctcatcg tgaagagtta gctcaactgg
    22021 aaagcgtctg ttcaggtaaa acgattatgc tgtcgcgcgg tcttgaactc gatcagtcag
    22081 tggccttcct gcgttacttt gccggttggg caggaaaaat aaccggtgaa acgctgaatg
    22141 tctccctgcc atcaatggga gaagagagat acacagcgtt tacccaacgc caacccattg
    22201 gcgtggtcgt cggtattgtg ccgtggaatt tctcaattat gattgctatc tggaagctgg
    22261 ccgcagcgct ggtatgtggc tgcaccatcg tcattaaacc aagtgaatat accccgctga
    22321 cactgctgcg agtcgctgaa ctggctaaag aggctggttt ccctgatggc gtaattaacg
    22381 tggtaaacgg tgctggcggt gagatagcgc aacagctgat cgcgcatcca gattgcgcca
    22441 aagtgagttt caccgggtca gtcgcgacag gtgagaaagt ccggcgttcg gcaacgtcgt
    22501 caggaaaacg cgttaccctc gaactgggag ggaaaaatgc ggcgctgttt ctcaatgatc
    22561 tcacggcaca agccatggtc aacggtattc ttgaagccgg ttatctgaat caaggacaga
    22621 tttgtgctgc cgcagagcgt ttttatctgc cccaggaaaa actggatacg gtcatgacgc
    22681 tcctcagaca acggttatcg gagatcgtgc ccggctcgcc tttagatgaa aaaacggtga
    22741 tgggcccgct ggcgaatcag gttcagcttg aaaaagtgct gcgtctgatt caacgtgcac
    22801 gggaagaagg ggataccatt gtttacggcg gtgaaacttt acccggcgaa gggtactttt
    22861 tacagccgac agcggtaaaa gtgcgtagta aaaacagtac gctgatgcac gaggagacct
    22921 ttggccctgt ctgtagcttt atcggttatc agaatgaaaa agaggcgctt tcgcatatca
    22981 acgattcgcc attcggcctt gctgcaagtg tgtggtcgga aaatatatct aaggcattac
    23041 gctacgctga agatattgat gctggcatgg tgtgggtcaa tatgcatacc ttcctcgatc
    23101 ccgcggtacc ctttggaggg atgaaaggat cgggcattgg tcgtgaattt ggcagcgcgt
    23161 ttattgatga ctataccgaa cttaaatcgg tcatggtccg ttattaacca tcctgaaaat
    23221 gatgcaggca gatcaaccat accgaaagga ggactgtctg cctgattatc aggttcgctc
    23281 gctgcgtttt tttgcttttg ggataatgtt aaacgcccgg cccggcgttc cttcctgcat
    23341 tactagcgcc atctaccgtt agagtaggct atctccagtc ttaacggttc agactcatcc
    23401 tgtaacatcg cttccaaaga caacgccagc gtctgatgat aggcatcttt tacactgact
    23461 ttcagcatgt tgatgctcgg ttcataacgt aaaatagcag cgcgaagctc acggcaaaac
    23521 cagttgagaa cccgtttgtc acccacattc acctcgtgcc attccggcat accccgagtg
    23581 agcagcggcg gtaatgtctc gccacctggc acggcgcaag agttgaataa acatattaat
    23641 ttgcggcgta ccaattcatg tgggcttatc ccctcaacca agagcctgtc gaatagcgcg
    23701 accggaatgg ttggcgtcat catcatttcc ctatctggtc catcgccaga tcccatactg
    23761 acgctctgga ctcctgttga gcgccgtctg atttctcggc agtgatttgc catttgattt
    23821 tcgtgaagtt cagcgacatc gtttccaccg gcttaccgcc ggcgccgccg ctaacactga
    23881 gttgtgatat cagcacgttt gtcagggtat aaacgataag cgaccgcatt ttgccgtcgt
    23941 cattgcggca caacgtcagc accgcggttc taattagcct cccgctacag cagtactcat
    24001 tgagcacagg cgtggcgagg tcgacaaatt tggtgagcga catttcacca acatgcgcac
    24061 gcccggaagt ccgctcagtg aggctaacat cgttatttac ctgcattgcc acattgtggc
    24121 tataagacat gatctctatc tgatcttcaa agccttcaac ctggctttcg cctttgatat
    24181 tgtcgagctt taaaaaaatc gcatccatga tttatctcct tgttgatcag gtggcagttc
    24241 agcagccaga cgaataccgg cggccaacgc ttgtgactct tattaaaagc gcaacgacca
    24301 aaaaacacag cgtgaaaagc gccaggtttg cagggatttt gccaacgttt acccacgtct
    24361 gatgaacgtt attccgctgg ttgcaatgca atagagggtt ttggcccgct gtggccaaat
    24421 acaattgagg ttatactgaa cgctctctgc catattcaat cccttttatc gcaaagtatc
    24481 cctggtgccg gtatcacagc gtcgttattc aaaaattgac atttcagaat aataatcagc
    24541 tatatataaa aaacacatca agaagcaaat atcaacttaa tttttactta tttaataaaa
    24601 aaaatccaaa ttgatttaca tcaattaaca catacaaaag cattaaaaat caaagcatta
    24661 aataaaaata atcactatgg aaaattttat ttttcttaat actcacatta taaattttat
    24721 ttgcttattt tcctgtgaac acaaaaaatg atttaaatca aaaaacaaac tattctcgtt
    24781 gattaacgtt ttgaccgaaa taaaaaagat tttatacgtc ccgggatagt ctccctttct
    24841 gatggacaat atgcattaac aagcgggcaa acaggtaact tctgcccggg taatccgtta
    24901 cccgactgat attaacattg tcatgaggtg atatcatttg cctggccagc cataatcatc
    24961 cggaaccggc gctacgccac gaacatcagg acggagcatt ttttgtcgat cctcttcgtc
    25021 atccacccag acactggcta tctcttcaca ggttgcaaac catacgccat catgcccttt
    25081 aatatgttca atcaaacgtg acaacatcat catatgatgc ccatgaccga ttatctgcgg
    25141 atgaagagcc atcgcatata aaccgttttc ctgatggtta taagcatagg taaaaatatc
    25201 cttccagcgt cgcagaacac cgtcagtatc gctcatcccc tcctggttac cggtatacgc
    25261 cagtgcggga aaatcatcca gataccagct aacaggaatt tccagaatcg cgctggccgg
    25321 gcctgcgata tttcccgttt cccaattcac ctgccaacgt tgaggatggt aaggcacaag
    25381 atctctcgcc atcaggctac tgtcatagag aaaaccggct tcctccagaa gatccagcgt
    25441 attctcgcta taatcccaat agggagaacg gtatcccaca gggcgtatgc caaaatgtct
    25501 tttataacag gcgaacgcca gatccataag tcggcgttct gtatcacgat tcaccagcgt
    25561 cgggttttca tgatagtagc catggtgagc gatttcatgc ccggcatcaa aaatcgcttt
    25621 actgatttcc gggaaggtgt ctacagtgtg tccgggaata aaaaaggtgg ttttgatatt
    25681 attttctttg aacaatttca gaagccttgg aacgccaact tgtgcgccaa actctcctcg
    25741 tgacataaag gatggcgacg gtcgattaaa tccgcccagc cataaagact gagcatctac
    25801 atcgacacca agattgaccg caatcctttt accctcaggt aattttaaat atcccataac
    25861 gacctccagc taatacatag aagggacaca ttctgttatt taatgtgtga tggccagata
    25921 ttatatatgc ctgcttttct gcgtctgtcc ttgaacgttg ttgctgcccc cccaagtcta
    25981 ttttcatata gaacatcgag gttaatttct cctgaaatga catcctcttg attgacgtgc
    26041 gcctctgcga taataccttg tggatttttc cacacgacat cacaggggct taaaattgaa
    26101 cttcgggccc agcagcctgg cagtggcccg cccgggtttc ctcccaggca acagtgaaca
    26161 agataaattt gattttcaat acaacgtgcg tggcaacaat gcctgactcg ccaaaatccc
    26221 tgttcagtaa acgtagcgga aggcgttaaa attaactcag caccctgttc cgccagcgtc
    26281 gcagcacact ccggtatttc tgcttcataa caaatattaa aacccacctt tgcaaatggc
    26341 agttgaaaaa cagccatttt atcgccttcc tgagtatacc aaccccgttc agccgggaag
    26401 atatgcgtct tactgtgagc ataatgttcg ccatcgggtc cccatatatg cgcaacattc
    26461 tcatagcgat ctgctccagt ctgctccaga tgagagccag caataatgaa ctgtcctctt
    26521 tctttcgctt cctgttgaaa aagctgctta taggcatccg taaactgatc aattaaagtt
    26581 aggtgtgaaa tgggtctttc ttgccatttt ttcaatagtg taaatagctc aatggtaaat
    26641 agctccggga agataacggc atcagccccc tgacttttat taagaagtat ccttaccttt
    26701 gttatgaaat cttcaaaagt gtttatttca gtaacaatac ctttgttatg aaatcttcaa
    26761 aagtgtttat ttcagtaaca atatactgac aggctgaaac agtaaaatta cgtgacatcg
    26821 tgatatcccc agcatgaaat ttaaacttaa attaacgtat agcgcatgga gaatattagg
    26881 gagtggacat tacgacatca ggttattttt tgtgaagctg cgcaaaatat atggagaaaa
    26941 gagtagaagc attgaacctt tatttacata aaggggactt tatcgatgat cgcagcgaga
    27001 cagagagtcg ataaaaatcc aggcgaaaaa caataaccct taccacaata ttattttcag
    27061 catctgaaaa taatcaggca aactaaatga taacgcgctg gtataaaacc aacgcgtatt
    27121 tttaccgata agggtaatga agacggccac ccgaaggtgg ccgttagaac ccggtagcgc
    27181 ttcgcttatc aggcctgtga aaccgagaca gctttagcgg tgagacgcca gcggctgttc
    27241 cgtcattggc gggtggtgct tttccggatc tttaatcagt acccacagga tgatggcgcc
    27301 gataatatcg aacagactga gtgcaatgaa gaacgggccg taaccgataa tagcgaccaa
    27361 tgcccccata aacaggttga agcttaactg tcccatccat gccgcagatc ctgccagacc
    27421 ggcaaccgtc gcgacctcat ttttcttgaa caggtcagcg ctcatggtaa tcacaacggt
    27481 agacagcgtc tggtgcgcaa aaccgccaat actcatcaat gcaatggcga catacgggtt
    27541 agtcgtaatg ctgacaaaac cgatcgaaat catcaaaaca gcgccgatgg taaagctaca
    27601 acgacgcgca ttgatcgtgg tcatgtgcat cttttccatg aagaacttcg ccaggaaacc
    27661 gcctgcaacg cagccgaagt ccgccgccag gaacggcagc caggcaaaca tggcgatctc
    27721 ttttaacggc agatgcatca cgttaatcag atacagcggc atccagaaac tcagcgttcc
    27781 ccatgccggg tcagcaagaa aacgggtaat cgccaacgcc cagaagttac gctttttaac
    27841 gatctcttta acggccggtt ttttattatc gtcctggaga tagctttcct ggccgtcttc
    27901 gatataacgc agctctttgt gggtgatcca cgggtgttta tttggcgagt tataaatcag
    27961 gaaccaggtg atggcgaaca gcacgccgat cccaccggta atcacaaacg ccatttcagt
    28021 accgatgccg ctatcagcaa aggtcagcat cgcccagacc accagcggcg gcgccagcat
    28081 cgcgccaatt gaagtaccga tattaaacag gccccccgca ataccacgtt ctttcgtcgg
    28141 gaaccattcg gcgctggctt taatcccggc cggaatcgct gacgcttcgg ttagccccat
    28201 cagaccacgc agaaatgcca ggcttatcca gccgccggcc agcgcgtgcg ccatgttgat
    28261 cagcgaccac aacaaggcaa agataaagaa gccgattttc agtccgatga catccatcaa
    28321 atagccggtg atcggctgcg caatggtgta acaaagctgg aaggcgctca ccacccagga
    28381 atattgttgc tcatcaaaat ggagttcttt catcatcgct ggcgccgcaa cgctaagcga
    28441 gctacgggac aggtagttta cgatggtccc cacgcagacc aggccgataa tccaccatct
    28501 taattttgtc atcttcatga taaagcctcg ttaaaaaaca ttagctccgc gccgtctgac
    28561 ctgtagcggg aaaactgaaa ttacaaaaat tggttgacca atcaatattt tctcatccgg
    28621 accggtcaaa atctggcggc aactcccgcc cttaatattc ttgaaataaa tacatcaact
    28681 catttcaagt tgaatggtga atgcttttca cccagcaaaa attgacgcag atcaaataaa
    28741 taaaattggc agaccgtgaa tgatgatatt tgtgatttgg ctagccaatt tagataataa
    28801 ggttgacatg agaaaaattt tggttgaatt tagggggcag aacgggttta caaagcacgt
    28861 ttcgatgttg gctggcaatg ggtcaaccac gaagacgtta tcgcaagaag aggaaacgag
    28921 atatgaaaca aacctggcgc tggtacggac ctaacgaccc ggtaacgctg tcagatgtac
    28981 gccaggctgg cgcaaccggc gtggtaacgg cgttacacca tattccgaat ggagaaattt
    29041 ggtcggtaga cgagatccag aaacgtaaag caatcgttga agaggcgggt ctggagtggt
    29101 ctgtggtaga gagcgtacct atccacgaag acatcaaaac ccacaccggt cagtacgatt
    29161 tatggatcaa aaactaccag caaacgctgc gtaacctggc gcaatgcggt atctatacgg
    29221 tttgctataa ctttatgccg gtgctggact ggacacgtac ggatctggaa tacgtattgc
    29281 cggatggttc aaaagcgctg cgttttgacc agattgaatt cgccgcgttc gaactgcaca
    29341 tcctgaagcg tccgggagca gaagccgact atacggcaga agagattgct caggcagagc
    29401 ggcgtttcgc caccatgagc gaggaagaca aagcacgtct gacccgcaac attattgccg
    29461 gtttacctgg cgcggaagaa ggctatacgc tggatcagtt ccgtcaacac ctggcgacgt
    29521 ataaagatat cgataaagca aaactgcgtg aacattttgc ctatttcctg aaagccatta
    29581 ttccggttgc cgacgaggtt ggcgtgcgta tggccgttca ccctgacgat ccgccgcgcc
    29641 ctattctcgg cctgccgcgc attgtctcta ccattgaaga catgcaatgg atggttgaaa
    29701 ccgttaatag catggcgaac ggcttcacca tgtgtaccgg atcttacggc gtgcgcgccg
    29761 acaacgatct ggttgatata atcaagcaat ttggtccgcg catctacttt acgcatctgc
    29821 gctctacgct gcgcgaagag aatccaaaga ccttccacga ggccgcccat ttgcacggcg
    29881 atgtggatat gtatgaagtc gttaaagcga ttgtggaaga agagcaccgt cgtaaagccg
    29941 aaggtagcga cgatctgatc ccaatgcgcc cggaccacgg tcatcagatg ctggacgatc
    30001 tgaagaagaa aacgaatccg ggttattccg ccattggccg tctgaaaggg cttgcggaag
    30061 tccgcggcgt cgaactggct atccagcgcg ctttctttag caaataacct tctttcgcat
    30121 ggcgcgacgc gtcatgcgat ttcccctact caatgcaata gcaacatgcc tcgccccgga
    30181 gatcgcgggc gaagacgtcg aatgacagga gtttgcaatg gaacagaata tcgccaccgc
    30241 ccaggtttcc gtcgcccgcc caaactggga caaatcacgt ctggtatccc gtattgtgca
    30301 tctgggctgc ggggcgtttc accgcgcgca ccaggcgctc tttacccatc atctactgga
    30361 aaagagcgac agcgactggg gcatttgtga agtgaacctg atgccgggta acgacgcgcg
    30421 gctgatcgcg aacctgaaag cgcaaaatct gctgtacacc gttgcagaac gcggcgcaga
    30481 aagcaccgaa ctgaaaatta tcggttcaat gaaagaagcg ctacaccctg aattcgacgg
    30541 tcatgcaggg attctggcgg caatggcgcg cccggaaacc gccatcgtct ccttaaccgt
    30601 aaccgaaaaa ggctactgca ccgaccccgc cagcggcgag cttgatgtca ataacccgct
    30661 gatccaaaac gatcttgccc atccacagca gcctaaatcc gccattggct atattgtcga
    30721 agcgctaaac atgcgccggg agcaaggact gaaagctttt accgtgctgt cgtgcgataa
    30781 cgtgcgcgag aatggtcacg tcgcgaaggc tgccgtcctc ggcctggcaa aagctcgcga
    30841 tgccgccctc gccgcatgga ttgccgacaa tgtgaccttc ccctgcacca tggttgaccg
    30901 cattgttccg gcagcgaccg aagagacgct acaactggtt gccgaccagt tgggcgttta
    30961 tgatccttgc gctatcgcct gcgaaccctt ccgccagtgg gtcatcgaag ataactttgt
    31021 gaatggtcgc ccggactggg ataccgtcgg cgcgcaattc gttgcagatg tcgtaccgtt
    31081 tgagatgatg aagctgcgta tgcttaacgg cagtcactct ttcctcgcct atctgggtta
    31141 tctcggcggg tatgacacta tcgccgatac tatgactaac ccggcttacc gtcgcgcggc
    31201 gctggcgctg atgcttgatg aacaagcgcc gacgttgtca atgccggaag gcaccgatct
    31261 ggaagggtat gcgaatttgt tgattgcgcg tttcactaac ccctcgttga aacaccgcac
    31321 ctggcagatc gcgatggatg gcagtcagaa actgccgcag cgtctgttgg acccggtacg
    31381 tctgcacttg caacagggcg atgactatcg ccgcctgacg ctgggcgtcg ccggatggat
    31441 gcgttatgtc ggcggtgtcg atgagcaagg taaaaccatt gatgtcgtcg atccgctgct
    31501 tgcacagtat caggcgattc atcagcaata tcagacgccg gaagaacgcg ttcgcgggct
    31561 actggccatc gagtctatct ttggcaacga cctgccgaag aaccacgaat ttgtgcaagc
    31621 cgttaccgac gcttaccaac agctattgca gaatggcgcg aaagccacgg tagaagcgct
    31681 ggctaagtaa ggagataaat catggctacg tttatgactg aagattttct acttaaaaac
    31741 gacattgccc gcacgctgta ccataaatac gccgcgccca tgccgattta tgacttccac
    31801 tgccatttaa gtccgcagga aatcgccgac gatcgccgtt tcgataacct cggtcagatc
    31861 tggctggaag gcgaccacta taaatggcga gcgctacgaa gcgcaggcgt ggatgagtcg
    31921 ctgatcaccg gcaaagagac cagcgattat gaaaaatata tggcctgggc caataccgtt
    31981 ccaaaaacgc tgggcaatcc gctgtatcac tggacgcacc ttgaactacg ccgtccattt
    32041 ggcattacag gtacgctgtt cggaccggat accgcggaaa gtatctggac gcagtgtaat
    32101 gagaaactgg cgacgccggc cttttccgcg cgcggtatta tgcagcagat gaatgtgcgg
    32161 atggtcggaa ccaccgacga ccctatagat tctctggaat atcaccacca gatagccgcc
    32221 gacgacagca ttgatattga agtcgcgcca agctggcgcc ccgacaaagt tttcaaaatc
    32281 gaactggacg gctttgtcga ttacctgggg aaactggaag cggcggcaga tgtcagcatt
    32341 acccgtttcg acgatttacg tcaggcgctc actcgccgcc tcgaccattt cgccgcctgc
//
LOCUS       DAGWFR010000025        31682 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.025, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000025 DAGWFR010000000
VERSION     DAGWFR010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 31682)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 31682)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..31682
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.025"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            447..881
                     /gene="uspF"
                     /locus_tag="MOX77_001306"
     CDS             447..881
                     /gene="uspF"
                     /locus_tag="MOX77_001306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspF"
                     /protein_id="HCA3356888.1"
                     /translation="MNRTILVPIDISDSELTQRVISHVEAEAKIDDAKVHFLTVIPSL
                     PYYASLGLAYSAELPAMDDLKAEAKSQLEAIIKKFNLPADRVQAHVAEGSPKDKILEM
                     AKKLPADMVIIASHRPDITTYLLGSNAAAVVRHAECSVLVVR"
     gene            complement(934..1272)
                     /locus_tag="MOX77_001307"
     CDS             complement(934..1272)
                     /locus_tag="MOX77_001307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HCA3356889.1"
                     /translation="MTKEAVIFLFIAIVVEVIATISLKLSDSFTRLVPSLVTIIGYCI
                     AFWCLTIPMRTIPAGIIYAIWSGVGIVLIGLIGWLFLGQKLDVPAIIGMLLIICGVIV
                     INLFSKSVSH"
     gene            complement(1547..3378)
                     /locus_tag="MOX77_001308"
                     /pseudo
     CDS             complement(1547..3378)
                     /locus_tag="MOX77_001308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010835222.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4765 family protein"
     gene            3808..3960
                     /locus_tag="MOX77_001309"
                     /pseudo
     CDS             3808..3960
                     /locus_tag="MOX77_001309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309956.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
     gene            4066..5001
                     /gene="ttcA"
                     /locus_tag="MOX77_001310"
     CDS             4066..5001
                     /gene="ttcA"
                     /locus_tag="MOX77_001310"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine(32) synthetase TtcA"
                     /protein_id="HCA3356890.1"
                     /translation="MQEIQKNTKKEQYNLNKLQKRLRRNVGEAIADFNMIEEGDRIMV
                     CLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFPEHILPAYLEQLGVEYKI
                     VEENTYGIVKEKIPEGKTTCSLCSRLRRGILYRTATELGATKIALGHHRDDILQTLFL
                     NMFYGGKMKGMPPKLMSDDGKHIVIRPLAYCREKDIVRFAEAKAFPIIPCNLCGSQPN
                     LQRQVIADMLRDWDKRYPGRIETMFSAMQNVVPSHLCDTNLFDFKGITHGSEVIDGGD
                     LAFDREEIPLQPAGWQPEEDDTALEALRLDVIEVK"
     gene            complement(5045..6419)
                     /gene="dbpA"
                     /locus_tag="MOX77_001311"
                     /pseudo
     CDS             complement(5045..6419)
                     /gene="dbpA"
                     /locus_tag="MOX77_001311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460614.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase DbpA"
     gene            complement(6906..7889)
                     /gene="zntB"
                     /locus_tag="MOX77_001312"
     CDS             complement(6906..7889)
                     /gene="zntB"
                     /locus_tag="MOX77_001312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc transporter ZntB"
                     /protein_id="HCA3356891.1"
                     /translation="MEAIKGSDVNVPDAVFAWLLDGRGGVKPLEDNDVIDSQHPCWLH
                     LNYTHPDSARWLASTPLLPNNVRDALAGESSRPRVSRMGEGTLITLRCINGSTDERPD
                     QLVAMRLYMDERFIVSTRQRKVLALDDVVSDLQEGTGPVDCGGWLVDVCDALTDHASE
                     FIEELHDKIIDLEDNLLDQQIPPRGFLALLRKQLIVMRRYMAPQRDVYARLASERLPW
                     MSDDHRRRMQDIADRLGRGLDEIDACIARTGIMADEIAQVMQESLARRTYTMSLMAMV
                     FLPSTFFTGLFGVNLGGIPGGGWRFGFSLFCILLVVLIGGVTLWLHRSKWL"
     gene            complement(8035..9189)
                     /locus_tag="MOX77_001313"
     CDS             complement(8035..9189)
                     /locus_tag="MOX77_001313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemoreceptor protein"
                     /protein_id="HCA3356892.1"
                     /translation="MLRNISVRTCIILFMVCTFLLVDTLQITFLHDLPILITCNIIYL
                     ISALLLWWYMTCYLVVPINTAKKSIEEVAAGNLSIHISEFGNNCAGRLIPGINSLSEN
                     ISALVREIRSSSQTAMTLSEQLAARSLSLSVKTEQQSASLIQTAASMDEMAASTKNNA
                     DNTRMASIQADCATQCARKGGELMVRVTENMRSITDCASQMTEIISLIDGIAFQTNIL
                     ALNAAVEAARAGDHGKGFSVVAREVRNLAHRSAEAAKNIKALIDVTHDNVRQGAAIVQ
                     EAEKNMQEIVGGSGQLNVLMSEISTTTREQEKGINQITLALSDLESATHSNVLMVEAL
                     SASSDVLKAQVIELQTKTDKFRLSQPGYSEHALSRSHVSPLSTITRRGQA"
     gene            complement(9600..10163)
                     /gene="smrA"
                     /locus_tag="MOX77_001314"
     CDS             complement(9600..10163)
                     /gene="smrA"
                     /locus_tag="MOX77_001314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA endonuclease SmrA"
                     /protein_id="HCA3356893.1"
                     /translation="MNLDDKALFLDVMEDVQPLKRHTDVHWQPTRNLKTPQRIDTLQL
                     DNFLTTGFLDILPLNEPLEFRREGLQQGVIDKLRSGKYPQQASLNLLRQPVETCRKML
                     FRFILEAQKEGLRNVLIIHGKGREAKSHANIVRSYVARWLTEFEDVQAYCSALPHHGG
                     GGACYVALRKTVQAKQDNWERHAKRSR"
     gene            10421..10936
                     /gene="ogt"
                     /locus_tag="MOX77_001315"
     CDS             10421..10936
                     /gene="ogt"
                     /locus_tag="MOX77_001315"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HCA3356894.1"
                     /translation="MLRLLEEKIATPLGPLWVVCDEQFRLRAIEWEQYRDRMEQLLNI
                     HYRHEGYERVSATNPGGLSDKLADYFAGNLAVIDTLETATGGTPFQREVWQALRAIPC
                     GQVMHYGQLAAQLGRPGAARAVGAANGANPISIVVPCHRVIGRNGTLTGYAGGVQRKE
                     WLLRHEGYLLL"
     gene            11132..11884
                     /gene="fnr"
                     /locus_tag="MOX77_001316"
     CDS             11132..11884
                     /gene="fnr"
                     /locus_tag="MOX77_001316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007849744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate/nitrate reduction transcriptional
                     regulator Fnr"
                     /protein_id="HCA3356895.1"
                     /translation="MIPEKRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDN
                     IIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFD
                     AIGSGHHPSFAQALETSMVCKIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILL
                     LSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRF
                     QKSGMLAVKGKYITIENSDALAALAGHTRNVA"
     gene            12035..12982
                     /gene="uspE"
                     /locus_tag="MOX77_001317"
     CDS             12035..12982
                     /gene="uspE"
                     /locus_tag="MOX77_001317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspE"
                     /protein_id="HCA3356896.1"
                     /translation="MAMYQNMLVVIDPNQDDQPALRRAVYLHQRIGGKIKAFLPIYDF
                     SYEMTTLLSPDERTAMRQGVISQRTAWIREQAKYYLEAGVPIEIKVVWHNRPFEVIIQ
                     EVIAGSHDLVLKMAHQHDRLEAVIFTPTDWHLLRKCPSPVWMVKDQPWPEGGKALVAV
                     NLASEEPYHNALNEKLVKETLQLAEQVNHTEVHLVGAYPVTPINIAIELPEFDPSVYN
                     DAIRGQHLLAMKALRQKFSIDEKVTHVEKGLPEEVIPDLAEHLQAGIVVLGTVGRTGL
                     SAAFLGNTAEQVIDHLRCDLLVIKPDEYQTPVELDDEDD"
     gene            complement(13037..13291)
                     /locus_tag="MOX77_001318"
     CDS             complement(13037..13291)
                     /locus_tag="MOX77_001318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2534 family protein"
                     /protein_id="HCA3356897.1"
                     /translation="MIMMKLKSAKGKKFLLCLLAVFIVAASVVTRATIGGVIEQYHIP
                     LSEWTSSMYAIQSAMIFVYSLVFTILLAIPLGIYFLGGDE"
     gene            13530..14561
                     /locus_tag="MOX77_001319"
     CDS             13530..14561
                     /locus_tag="MOX77_001319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HCA3356898.1"
                     /translation="MFTEFFLKNAFNLAILFSCGMALLVVRFWLSRNVQWKKGFTFHA
                     AQFFIYAIIIGTIGSILNNAIEDYNLRFISSGVIDFICTSLIALILTIKLFLIINQFE
                     KAQVNKGRDVTSTRILARVIKITIIVAIVLLYGEHFGMSLSGLLTFGGIGGIAVGMAG
                     KDVLSNFFSGIMLYFDRPFSIGDWIRSPDRNIEGTVAEIGWRITRINTFDHRPLYVPN
                     SVFSSISVENPGRMTNRRIKTVIGLRYEDADKIGLIVDAIRNMLQAHSDIDQKQTLLV
                     YFNEFADSSLNIMVYCFTKTTIWQEWLAVQQDVYLKIIAIVQENGADFAFPSQTLYID
                     DPEAAPAIK"
     gene            complement(14647..15249)
                     /locus_tag="MOX77_001320"
     CDS             complement(14647..15249)
                     /locus_tag="MOX77_001320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HCA3356899.1"
                     /translation="MTKKVNLSTTAGADVSTINEAVSQRIKQFRSQKKMSLDELARRS
                     GVSKGMLVEIEGCKANPSIALLCKIAAAMGVSVADFVNVASEPMVHLINRDAIPVLWR
                     GEKGGSAKLMAGTSGPDMLELWQWIMHPGEQFESAGHPADTCELLFVNQGTLTLTVDG
                     RRFIIREGCSAVARTDMPHAYVNDTNEVLEFTMTVNEKSR"
     gene            15293..15979
                     /locus_tag="MOX77_001321"
     CDS             15293..15979
                     /locus_tag="MOX77_001321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="B3/4 domain-containing protein"
                     /protein_id="HCA3356900.1"
                     /translation="MSSMLPSISPELARIAPGFRALSINVIAAPVRDAQVGEIALKEA
                     CQAVINGQPAWAQAHIDAWNAVFKAFGAKPKRTPCSAEALRKRVLKDGTMAALDPVVD
                     LYNAVSLRYAVPVGGENSAAYCGSPRLVFADGSETFDTLKEGKPVTESPEPGEVIWRD
                     DRGVTCRRWNWRQGVRTRLSASDKMMWFILESLPEMPVDELYAAENMLTDGLEKMMPG
                     LRFESTLIGV"
     gene            16007..16345
                     /locus_tag="MOX77_001322"
     CDS             16007..16345
                     /locus_tag="MOX77_001322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000051808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356901.1"
                     /translation="MSLFLTSFIFEKKEYDEEFYQLDGWIERYTQTIDGYIGMESYTD
                     AASGRMVNNYYWQTRESMELLINNLQHQQAKSQSHKWLSGYQTIIAEIQGCHNVNLPH
                     PLASFSVPYA"
     gene            complement(16451..17008)
                     /locus_tag="MOX77_001323"
     CDS             complement(16451..17008)
                     /locus_tag="MOX77_001323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HCA3356902.1"
                     /translation="MAKIIQMLKGEVFMTPTTTQDYISLGQEHAVTFGKTQLTLKPGI
                     LAEGEPLPCTKGLVSHNLLPGYCIPGIKKRIIVVPSLDTPVCEWQVKEYSDRLKSAGS
                     HSNRAVYVLSMDTPFAQARFIREHDIHPGIIFVSDYACRQFLDNSGLKINELSIFARA
                     LIECDENNVVTHVSVPRDITHLPVY"
     gene            complement(17107..17940)
                     /locus_tag="MOX77_001324"
     CDS             complement(17107..17940)
                     /locus_tag="MOX77_001324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356903.1"
                     /translation="MRMSKHNLIIYSLLLAAVPISVLADSSTTSAATVGMFSPPTAPS
                     VGHRPGTPRDTYELKFNGLDFSIEKYTPFPGMTIARDDRYLGISDPDNNYQSAETFTT
                     VCTYYQINKDNSQHILKREKPCEHKFNIQKEHRGSKIKLEIYNETDMASASGYTPVPS
                     VSEFQYIETETISNTPSPDLTVMSIDKPVLSPGESATITTIVKDIDGNPVNEVLIDKT
                     VKYENSKGLWDYGPIKKENVPGKYTQVITYRGHSNERIDISFEYAGDLFRKEISIRGR
                     L"
     gene            complement(17961..19943)
                     /locus_tag="MOX77_001325"
     CDS             complement(17961..19943)
                     /locus_tag="MOX77_001325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-partner secretion translocator ZirT"
                     /protein_id="HCA3356904.1"
                     /translation="MVFSKKPITKYITWAIVTSQIPLPVIADSDNEIQSWIAGTASSI
                     SPHLQEGTLEDYAKGKIKALPGQAANHLVNEGMKSAFPEIIFRGGVNLEDGAKYRSSE
                     FDMFIPVQETTSSLLFGQLGFRDHDSSSFDGRTYVNVGVGYRQEVNGWLLGVNTFLDA
                     DIRYSHLRGGIGGEVYKDSLAFSGNYYFPLTGWKTSVVHELHDERPAYGFDLRTKGTL
                     PDFPWFSGELTYEQYYGDKVDLLGNGTLSRNPRAAGAALVWNPVPLLEVRAGYRDAGN
                     GGSQAEGGLRVNYSFGTPLHEQLDYRNVGAPSNTTNRRAFVDRNYDIVMAYREQASKI
                     RIMAMPVSGLSGTLVILMATVDSRYPIEKVEWSGDAELLAGLQLQGSLGSGLILPQLP
                     LTATDGQEYSLYLTVTDSRGTRVTSERIPVRVTQDETSFRSWINVINDDVQVEDGNFV
                     ISTPLPAGEEGKVIEWHYVRERSEEEWASLKPRHIKYQSDTPGLAFKALGGTERDGHW
                     VERVLVTHIGDDARSLKLHIEASGPDDKHPVKGTVLLQAQSDSIAQKVTSVEVLFTQG
                     TEEANGSVTAPVVGTEMRARTLCVNNTDCTDAFNYQWEISDEMKSWQSVPGATKATWL
                     LPYSLNGESLQNKYIRVRIISDKGNAKGNTATSDAN"
     gene            complement(20018..20863)
                     /locus_tag="MOX77_001326"
     CDS             complement(20018..20863)
                     /locus_tag="MOX77_001326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356905.1"
                     /translation="MYFKKSLLALAICASVVSVEAVANIRANDMASSATPASVGHRPV
                     ATTNAKKIEVSGELTTGSTLQIADVFIEDEDGDPLSLDKMNNADDIKWYLVDNEAADP
                     SGTPAATGTAFTIPAYAGGKKIKIVYRIKTATGTPDSAFLPATVLLTSASSGVSGDSA
                     ADGTISNKLRSVTINVVNESGKPTDELNGTNDANTPVVGGTLEVVLECAATAAAECEV
                     SNYNFTWQMADAGTPDRFTDLNNTNAEKHKYIIKGTEQNKLFRVHVTPKTTKATPENK
                     RAIRR"
     gene            21160..22017
                     /locus_tag="MOX77_001327"
     CDS             21160..22017
                     /locus_tag="MOX77_001327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HCA3356906.1"
                     /translation="MMMKRAIIVSVLEQIEKNLEERIDIEKLVVITGYSRRSLQDFFK
                     EKCGVSIGKYIRQRKLSRSATLLKLTSQSVTDIAFRMGFDSVQSYSREFKKTFGVNPN
                     NYRKADFWDLRNLRPPYWLDCDGHYQFEICQLTSKEIFGFQTSHQIATNDLPKKASPI
                     KWKIIHETLRTWGENVYCLSSFKPDNTKDQVIAVSSFFGMEHNSVDGGKIPMSRVIKC
                     GKYAKFHFVGHKEQYQQFSNTIYMCILPKLNIIRREGEDIEYFHLASVQKQQNNESIV
                     DLYYYIPVL"
     gene            22408..23517
                     /locus_tag="MOX77_001328"
     CDS             22408..23517
                     /locus_tag="MOX77_001328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_448089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356907.1"
                     /translation="MYIIRGDIIHIFEIRADDMYTTIRNTTLAMVACFSYIAHASTHP
                     PLIITRGAGGDASGAAVIHDNWRHGTPDLVNLTDIPIDKIRPEKYRCVLIIGQGAIKE
                     MLLANNASAILSGKTVGLYTHLIDQNTLRLLRQLQNKVRFNLFFTRSQITLLKLRNIS
                     EYNFLSSKVNNVWGQDSLAIETVAPDRGNIPEKALPLKTTDYVIWLGGNYTTSSGTQR
                     IFTNDQIVVALKPLHNVISPNASIAIMLSPRFFDNSMSKEAKVKRLKAVLNTFSQNRV
                     TFYMSKEMLANLKEFDLPVQLSPSYAELMRMPWASATRHFASVDQYNLFADLIPKVTP
                     FLLEPNDADQALYATDYLNTRRVSLTQNILNHGCD"
     gene            complement(23731..23967)
                     /locus_tag="MOX77_001329"
     CDS             complement(23731..23967)
                     /locus_tag="MOX77_001329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001168019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgdI/YgdR family lipoprotein"
                     /protein_id="HCA3356908.1"
                     /translation="MQKCSLITVLSLSVLMLAGCTTTYTMTTRTGEIIETQGKPEVDT
                     ATGMTKYADVYGYHRVIKTSEIVQTTEGASKLDW"
     gene            complement(24096..24686)
                     /locus_tag="MOX77_001330"
     CDS             complement(24096..24686)
                     /locus_tag="MOX77_001330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HCA3356909.1"
                     /translation="MTTKHSRTPGRPRQFDPEQSIETAQHLFHSRGYDAVSVADLTKA
                     FGINPPSFYAAFGSKLGLYTRVLKRYRMTDAIPLGALLRHDRPTAKCLIDVLMEAARR
                     YAADPDATGCLVLEGAHCNDKPAREAACEFYIAAENLIRTYVAMRYPQEADRTTDFMG
                     TLMAGLSAKARAGYSLERLQESVLLAGDVLERLLPD"
     gene            24764..25477
                     /gene="bdcA"
                     /locus_tag="MOX77_001331"
     CDS             24764..25477
                     /gene="bdcA"
                     /locus_tag="MOX77_001331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HCA3356910.1"
                     /translation="MMLFRNKSVLVLGGSRGIGAAIVRRFSADGASVVFSYAGSREAA
                     EKLAAETGSTAIQTDSADRDAVISLVREYGPLDILVVNAGVALFGDALEQDSDAIDRL
                     FRINIHAPYHASVEAARNMPEGGRIIIIGSVNGDRMPIPGMAAYAASKSALQGLARGL
                     ARDFGPRGITINVVQPGPIDTDINPEDGPMKELMHSFMAIKRHGRPEEVAGMVAWLAG
                     PEASFVTGAMHTIDGAFGA"
     gene            complement(25568..26437)
                     /locus_tag="MOX77_001332"
     CDS             complement(25568..26437)
                     /locus_tag="MOX77_001332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HCA3356911.1"
                     /translation="MEYSILSNNLKMPMVGFGVFKVTDKEECQQSVLSAIRSGYRLID
                     TAAVYGNEDAVGDAVREAIATGLCTREELFITSKLWVQDMANYDLAKAGIEASLKKSG
                     LDYFDLYLLHQAMGDYFSAWRALEDAYEAGKLKAIGVSNFYAHVLANFCETVRITPMV
                     NQVELHPYFAQPAALETMKHYNVQPEAWAPLGGGRHKPYENVMLQRIADAHQKTIAQV
                     VLRWNVQRGVTVIPKSTRQERIEENFAIWDFSLTDNEMAQINALDLGYVGEAVKHFNP
                     EFVRGCLGVKIHD"
     gene            complement(26714..27619)
                     /locus_tag="MOX77_001333"
     CDS             complement(26714..27619)
                     /locus_tag="MOX77_001333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCA3356912.1"
                     /translation="MDKLEAMQVYVCVVDTHSFIRAAEVLGVPRSTVSRVVKELESWL
                     KIQLLQRTTRKLSVTAEGRRYYEECKRVLADIAAMESSFPGRAAQPKGRFKVGMPQSL
                     ARHCIIPTLPAFLCQYPELELILCSSDSVEDIILQGYDCVIRAGRIDDSTTLVARPLA
                     SFNWVIAASPTYIERYGSPENLDDLQKHHAVGYLNHRTGRTTDWFFTREGEDYAMRVQ
                     ETLVVDDTDAYIQAGIQGLGLIRVASYLVAPYLHSGALVTCMDNHFYDLPLALVYPQN
                     RFLSPAVRAFYDWCKTALSQPEPLR"
     gene            27738..28667
                     /locus_tag="MOX77_001334"
     CDS             27738..28667
                     /locus_tag="MOX77_001334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic alcohol reductase"
                     /protein_id="HCA3356913.1"
                     /translation="MKQSNNQVGEKVLVLGAGQLGASVLASLVPAITQRNGSVCVIVS
                     GRSRDKQSKRRSSIHQQLADAGARFIPVDIADSSVAALKDQFHGFDTIINCMGFVAGA
                     GTQIKITRAVLEAGVKRYFPWQFGVNYDVVGKGSGQPVWDEQYDVRTLLREQNVTEWV
                     IVSTGLFTSFLFEPAFDVVNLDQKTINALGGWERQVTVTSPADIGRLTTEIYLHQPRI
                     TNEVVFVAGETTSYAKLAKTVERVTQQTFTRGVLTLPDLQEQLRLHPHDPMLRYRVAF
                     ARGDGMWWPMSDTWNAQHHLPTQDIATWLKTQQ"
     gene            complement(28764..30377)
                     /locus_tag="MOX77_001335"
     CDS             complement(28764..30377)
                     /locus_tag="MOX77_001335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HCA3356914.1"
                     /translation="MRHSVSVTCCALLVSSFSLAYAADVPGGTVLAEKQELVRHIKDE
                     PASLDPAKAVGLPEIQVIRDLFEGLVNQNEKGEIIPGVASQWKSNDNRIWTFTLRDDA
                     QWADGTPVTAQDFVYSWQRLVDPKTLSPFAWFAALAGITNAQAIIDSKVTPDQLGVSA
                     VDAHTLRVQLDKPLPWFASLTASFAFYPVQKANVESGKDWMKPGKLIGNGAYVLKERV
                     VNEKLVVVPNTHYWDNAKTVLQKVTFLPINQESAATKRYLAGDIDITESFPKNMYQKL
                     LKDIPGQVYTPPQLGTYYYAFNTQKGPTADSRVRLALSMTIDRRLMAEKVLGTGEKPA
                     WHFTPDVTAGFKPDPSPFEQMSQEELNAQAKTLLRAAGYGSQKPLKLTLLYNTSENHQ
                     KIAIAVASMWKKNLGVDVKLQNQEWKTYIDSRNTSNFDVIRVSWVGDYNEPSTFLSLL
                     TSTHTGNISRFTNPTYDKILTQATMENTAEARNADYNAAEKILTEQAPIAPIYQYTNG
                     RLIKPWVKGYPITNPEDVAYSRTMYIVKH"
     gene            30567..31295
                     /gene="mpaA"
                     /locus_tag="MOX77_001336"
     CDS             30567..31295
                     /gene="mpaA"
                     /locus_tag="MOX77_001336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein tripeptide amidase MpaA"
                     /protein_id="HCA3356915.1"
                     /translation="MTVTRPRAERGAFPPGTEHYGRSLLGAPLIWFPAPAVNRESGLI
                     LAGTHGDETSSVVTLSCALRTLNPSLRRHHVVLAVNPDGCQLGLRANANGIDLNRNFP
                     AANWKAGETVYRWNSRAQERDVVLLTGDHPGSEPETQALCQLIHRLQPAWVVSFHDPL
                     ACIEDPRRSELGEWLADAFALPLVTSVGYETPGSFGSWCADLNLHCITAEFPPVSADE
                     ASEKYLLAMSNLLRWHPKDGVDPS"
     gene            complement(31270..>31682)
                     /locus_tag="MOX77_001337"
     CDS             complement(31270..>31682)
                     /locus_tag="MOX77_001337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460639.1"
                     /note="catalyzes the epimerization of L-alanyl-D-glutamate
                     to L-alanyl-L-glutamate; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="L-Ala-D/L-Glu epimerase"
                     /protein_id="HCA3356916.1"
                     /translation="LAARCQLLADLNVAMLEQPLPAQDDAALENFIHPLPICADESCH
                     TRSSLKALTGRYDMINIKLDKTGGLTEALALATEAREQGFGLMLGCMLCTSRAISAAL
                     PLMPQVSFADLDGPTWLAVDVEPALRFTTGQLHL"
BASE COUNT         8263 a         7934 c         7222 g         8263 t
ORIGIN      
        1 gcccgaacat ccgttcgggc ttgtcaattt atacgctgga aagcaaaggt taacgcaatg
       61 gcccaacgac aaaatgaata tgtgacaata aaggcatata acaggcgtag aatatcgtaa
      121 ccgaatgata ttgtataatt tttatttcgt ataatacccc taaaagcatt cgtataaatt
      181 atatctattt cactgcgaat tatttcatta attattgaat taaacggtaa catctctttt
      241 taggtctttc ctgacaaggc agaaataacg ttttaacgtc aactcgctga ttatttacgg
      301 ggaatgcgct taatattacg ccgtcctccc ctgttggtag tccccccaga gtatcgtgga
      361 gcagcaccta aaatgtgacg tatgtcattg tacataaagt gcctttaggg agtagaattt
      421 cagtggatac ttaaacagga ggttttatga acagaacgat tcttgtaccc atcgatattt
      481 cagattcaga attaactcaa cgcgtgattt cacatgttga agccgaagca aagattgacg
      541 acgctaaagt gcactttttg actgtaatcc cgtctttgcc ctattacgct tcactgggac
      601 tggcttattc agcagagctc cccgcaatgg acgatttgaa agccgaagcc aaatctcaac
      661 tggaagcgat tatcaagaaa ttcaaccttc ccgcggaccg cgtgcaggcg cacgtggcag
      721 aaggctctcc taaagataag attctggaaa tggcaaaaaa attaccggcc gatatggtga
      781 ttatcgcctc gcatcgtccg gatattacta cctatctgtt gggttccaac gccgcagccg
      841 ttgtgcgtca tgcggaatgc tccgtactgg tggtgcgcta aatacccgag cccgcataag
      901 agagtgcggg ctcaaatcaa ccatcatcat cgcctagtga ctgacgcttt ttgaaaacag
      961 attgattacg attacaccgc agatgataag caacatgcca ataatagccg gcacatccaa
     1021 tttttggcca agaaacagcc atcctatcaa tccaataaga acaatcccta ccccagacca
     1081 aatggcataa atgatacccg cagggatggt tcgcataggg atggtaaggc accagaacgc
     1141 gatacaatat ccgatgatgg taacgaggct cggtaccaga cgcgtaaaac tatccgataa
     1201 ttttaatgag atcgtggcga taacttctac cacgatggcg ataaatagaa agattacagc
     1261 ttctttagtc atacatctct tcgttccgat atttttctgg tcgtggtgac atcttaatta
     1321 atacggatga cagaataaag acgcttttga cccgttgcgt atctcgccat aacctacttc
     1381 aagttgcatg tgctgcagct gcgttccctt accccagtca cttacttgag taagctcctg
     1441 gggattcgct cgcttgccgc cttcctgcaa ctcgaattaa ttaaagtata aaagcaacct
     1501 ttcatacacg agagataaca acaataaacc tgttcaggat ttatgattac ttagaagcgt
     1561 ttgcctgccc cgtattttct gctttaccat atgtcctgtc aattatacca acagggtcca
     1621 ctggtgtgtt ttttggcata acccagccac tttcactgac actacctcgt gtaagatatt
     1681 tgacttttac cctaacgata ataagataat gttccctgct gaacctgtcg gcaacactaa
     1741 gatcggtggt atattcaggt acgattcttc cacttcgaac ctgctctttg gctatttcag
     1801 cagagacagg caatacctct acatcgcccc ctcaataccg cctgctgttt taaaactaac
     1861 aatattttca gcctgcggac ctattgtacc tcggcataat acaacttcag tctcccctgc
     1921 tacagcatcc ccactctggt atttcttata aatactttgt acattttctt ctgatgtagg
     1981 gtataaattt tctgacagag aggccagtat atcttccagt aagggggaat catccgtaat
     2041 atccagaagc tcttcatcat aacccgtgtc tccttctctt aactctgaat aaggcttatc
     2101 aatatggcga ataagccccc cacctttcag ccctgacgcc tgataaaatc ttccatcaga
     2161 agatcggtaa aatgttatgg ctgaattttt tccgctatcc gaataggttg cctgatacgt
     2221 ttctgaaccg ggttctttag ttaaaacgag ctctctgtcg ccatatttta tcgtattagg
     2281 cgcttccgat gacagcggtg gatatgaggc ttgttttctg tagcgtcccc ctgccataga
     2341 tgtaacgtgt tcaaataggc catctaacac cttacctgcc aggttaggct ccgtagttgg
     2401 ggcaggatga tcctccggga gagccctttc atatctctgt aattctttaa caggtaaaaa
     2461 atcattctca ccctctgaat taccattttt tatcctataa tcaccagatg ttactgctaa
     2521 tcttgatgat aataacaaac cagttactgc aatgttttta atactcctgt ccattttatg
     2581 aatggttact ggctgaagat gattgcggct atgagaagat aagaaaattt gcttttgaat
     2641 ttcctttccc tcaaatataa tttgctcagt gcttttaggt ggaacagtta cgctatctac
     2701 attaaatagc tcatgttcac cactcatcgt tacctgagaa aaacacgacg atgtatgtgc
     2761 aattgcagcg ggatcaatct ctttataaat aacattggcg taaacgtttg caacttcacc
     2821 gcttgcattt aaatgatcgt gcaaaatatg ttttagaaat agatctaaca acattttttt
     2881 tgatgtgatt ccatttacac agttgtgaaa gtcaggggga attggatagc cgttttgatc
     2941 aaatggaagc gataaacatc ctcgcccccc atcaatattt tcgtaactgt aatttagaga
     3001 tatctttacc tcgcatttat tggtatctac atcgtcattg atactgcgct ctactttata
     3061 attaaccagc ctacggaagg ttgcgctatt tgaataataa aaatccaatg ttgattggat
     3121 ttcttcacat ataatttcat gtgttggctc aaagaagaat tcataaatat ttaggctgtt
     3181 cttttcttca tctttggcca tctcatccag cttaatatat tcttctggta aattagatat
     3241 ttgctcatga aagatatcgt cctgataaag tccatccaac attgaaaggt acggtatggt
     3301 atcccaactt ctgatagctt gtatctgtac cgtctgctgt gattctctgg ttgatatatc
     3361 acttactgtt atacgcatta cattctccag ccagaattat ggtatacatc ataaggtgta
     3421 gatatcaggt agcaattctc atcgcaaata atttgtctga actgtacata tgatacaggc
     3481 tatttttaat tcaatatgac caccagaata ggcaagaaaa ttttaaatag tatacggtaa
     3541 aatgatctta cccaacgata attaaacaca ctgcactatc ttattagata ataaaatact
     3601 gatacgttat tttatatcac caataaaaga gcaaaaaggg tgtgccgaat atcattttac
     3661 acctgtcccg gttcacccca cggaaccact tgaaacgtac catcatcagg acgctgcagc
     3721 gcctgaattt cagttgagcc cgtcacttct taacgggcct agctacatga tgtatacagt
     3781 tgacaatatc cgaaggtact atctctatta aaacgtgctg gcattcgtcg ccgtaatccg
     3841 taccatacgc gacatacttt tgcctgctgg ctgttgacgg caggagcgaa cccggcattt
     3901 atcgccagcc aaatggggca tgaaactgcg catatggtgt atgaaattta cggtatgtag
     3961 attgatgaca tgaacgacga acaagtagcg atgttgaatg cgcggttatc gtagttgcaa
     4021 agtttgcccc caatttgccc catttagtac cagagaactg aaataatgca agaaattcaa
     4081 aagaatacaa agaaagaaca atacaacctc aacaagttgc aaaagcgcct gcgccgtaac
     4141 gttggcgaag cgattgccga ttttaatatg attgaagaag gcgatcgcat tatggtttgc
     4201 ctttctggcg gcaaagatag ctatacgatg ctggaaattt tacgtaattt gcagcaaagc
     4261 gccccgatca atttttcact ggtcgccgtc aacctcgatc aaaagcagcc aggttttccg
     4321 gagcatatcc tgccagccta ccttgagcag ctgggcgtag aatataaaat cgtcgaagaa
     4381 aacacctacg gcattgtgaa agagaagatt ccggaaggaa aaaccacctg ctcgctgtgc
     4441 tcgcgtttgc gtcggggtat cctgtatcgt actgcgactg aactgggcgc gaccaaaatc
     4501 gccctgggcc accatcgcga cgatattctg caaaccctgt ttctgaatat gttctatggc
     4561 ggaaaaatga aagggatgcc gccgaagctg atgagcgatg acggcaaaca tatcgtgatc
     4621 cgcccgctgg cttactgccg cgagaaagat attgtccgtt ttgctgaggc caaagccttt
     4681 cctatcattc cttgtaatct gtgcggttcg caacccaacc tgcaacgcca ggtgattgcc
     4741 gacatgctac gcgactggga taagcgctat cctggacgga tcgagacgat gtttagcgcc
     4801 atgcagaatg tcgtgccgtc tcacctttgt gacacaaacc tgttcgattt caaagggata
     4861 actcacggtt ccgaggtcat cgacggcggt gatttagcgt tcgatcgtga agagattcca
     4921 ttgcagcccg ctggctggca gccggaagaa gatgacaccg ccttagaggc gttgcggctt
     4981 gatgttatcg aagtgaaata atctgcaggc gtctcagcac tccgctgaga cgccatacta
     5041 tcgatcattt taatagccgt acccggcatg acttgccttt gatcttcccg ttttgcaact
     5101 gcttccaggc tttttgcgct actgcttgac gtacggcgac gtaaacgtgc atgggatgca
     5161 cgttaatttt gccaatatcc gccccgtcca atccaatatc gccggtcagc gcgcctaaaa
     5221 tatctcccgg acgcattttc gcttttttgc cgccgtcaat gcatagggta gccatctctg
     5281 cggccagagg gagtaacggc tgccgggcgg gcgcattcag ccagttcagc ttgagttgca
     5341 gcatttctga aagaatattc gcccgctgcg cctcttccgg cgcacagaaa ctgatcgcca
     5401 ggccgctgct tcccgcgcgc gccgtacggc caatacgatg gacatgcacc tccgggtccc
     5461 aggccagctc atagttaacc accagttcga gcgatttaat gtctaaccct cgcgcggcaa
     5521 cgtcggtggc aaccagaatg cgcgcgctgc catttgcaaa acgcaccaac gtctggtcgc
     5581 ggtcgcgttg ttccagatcg ccgtggagcg ccaacgcgct ttgtcctacc gcattaagcg
     5641 catcacaaac ggcctgacaa tcttttttgg tattgcaaaa caccacgcag gacgctggct
     5701 gatgctggct aagcaacgtt tgtagcagcg aaattttttc atgcgccgac gtttcgaaga
     5761 actgctgttc gatagccggt agcgcatcta ccgtatcgat ttcaatacgt attggctgct
     5821 gctgtacacg accgctaatc gccgcaatgg cctcaggcca ggttgctgaa aacaacaacg
     5881 tctggcgcgt cgcaggcgca aagcggatca cctcatcaat ggcgtcactg aatcccatgt
     5941 ccagcattcg gtctgcttca tccattacca gaatgtgcag cgcatccagc gatacggttt
     6001 ctttttgtaa atgatccagc aggcgccccg gcgtcgcgac aatgatatgc ggagcgtgct
     6061 gaagcgagtc gcgctgtgcg ccaaagggct gcccgccaca caaggtcaga attttggtat
     6121 ttggcagaaa acgggccagg cgacgtaact ccccggctac ctgatccgcc agctcccgcg
     6181 tcgggcacag cactaatgcc tgtgtctgga acagagtgac atcaattcga tgcaagagcc
     6241 caagaccaaa cgccgccgtt ttaccgctac cggtcctggc cttgcacacg cacatcatta
     6301 cccgccagaa tgacgggtaa tgctgcggcc tagacaggcg tcatctcaag atagcccagc
     6361 tcagtaaggt tattgagctg ggcggcgggc aaaacattca gggttgaaaa agcggtcaca
     6421 atttactctc gcggtaacga ctcatagtca gcaggcgcgt atcctcgcag atccggacgt
     6481 ttgatgcgac attttaatcg gttcttcgtc cggcggcggg tcgggcatcg gctgaggacg
     6541 gggaagcggc tcaggaatgg gaacagggtc agtgggaatc gggtccgaca aggacgagtg
     6601 tagatataat aaggtcaaaa gacagctcat attaccctcc agaatgtcat tcagactctt
     6661 aaagggtaga cgctgatatc ctacaggcaa aaaaaagccg actaatctaa gccggcgtcg
     6721 tacgaatcaa ttgtgctatg cagtaattca aaaaaggaag caagacaata tagaacgcaa
     6781 cgcccatcgc ttgacgttgc attcacctgc gagagagata ttgccccgaa taggtagatg
     6841 gtttattgac ttcgctcaaa tttctcggcg ttttttcacc caaaacggtc tgaaaagcgc
     6901 ttttgttaca accatttact gcgatgcaac cataaagtaa caccaccgat caggacaact
     6961 aacagaatac aaaacagaga aaagccgaac cgccatccgc cgccaggaat accgcccagg
     7021 ttaacgccaa ataaccccgt gaagaaggtg ctgggcagaa aaaccatcgc cataagcgac
     7081 atggtataag ttctgcgcgc cagagactcc tgcatcacct gggcaatttc atccgccatg
     7141 atgccagtac gcgcgataca agcgtcaatt tcatccagcc cccttcccag cctgtcggcg
     7201 atatcctgca ttctgcgccg gtgatcgtcg ctcatccacg gcagccgttc actcgcaagc
     7261 cgggcataga cgtcgcgctg cggcgccata tagcggcgca taacaattag ctgtttacgt
     7321 agcaacgcga ggaaaccgcg cggtgggatt tgctggtcga gaagattatc ttccagatcg
     7381 ataattttat cgtgtagctc ttcaataaat tcactggcgt gatcggttaa cgcatcgcat
     7441 acatccacta accagccgcc gcaatctacg ggcccggtgc cctcctgcaa atcactgacc
     7501 acatcgtcca gcgccagaac ctttcgctga cgggtagaca caatgaaccg ctcgtccata
     7561 tataaacgca ttgctactaa ttgatccggg cgttcgtcag tactgccatt aatacagcgc
     7621 agcgtaatga gcgtcccttc ccccatacga cttacgcgcg ggcgcgagct ttcaccagcc
     7681 agcgcatcac gcacgttatt ggggagtaaa ggcgttgaag ccaaccagcg ggcgctgtcc
     7741 gggtgggtat aattaagatg tagccaacag ggatgctgac tatcgatcac atcattatct
     7801 tcgagcggtt ttactccacc acgaccatcc agtagccatg cgaaaacggc atccggcacg
     7861 ttcacatccg atcccttaat ggcttccaca gcgcctccac gttacaactc tcatgccgtt
     7921 agtctagctt tcgggaaagg ttaagcaatc tctcattttc tcattgcgca aaaagaatga
     7981 cgggaacgtg cgaaaaaagc gccttagcaa caggcgctta ccaaacatgt attatcaggc
     8041 ctggccgcgc ctggtgatgg tcgaaagagg tgatacatga gagcgcgaca gcgcatgttc
     8101 actgtaaccc ggctggctta aacgaaattt gtcggtttta gtctgtaact cgatcacctg
     8161 cgcctttaaa acatccgaag aagcagatag cgcttcaacc attaagacat tgctatgggt
     8221 tgcgctttcc agatcgctca acgccagggt tatctggtta atgccttttt cctgctcccg
     8281 cgtggtggtg gaaatttcac tcatcagcac gtttaattgc ccggagccgc caacaatctc
     8341 ctgcatattt ttttcagcct cctgcactat ggcggccccc tgccgcacat tgtcatgcgt
     8401 aacgtcgatc agcgccttga tattttttgc cgcctcagcg ctacgatgcg ccagattacg
     8461 cacttccctg gccaccacgg agaaaccttt tccatgatcg cccgcccgcg cagcctctac
     8521 cgccgcgtta agcgccagaa tattagtctg gaatgcgata ccgtcaatca atgaaataat
     8581 ctccgtcatc tgcgaggcac agtcggtaat agaacgcata ttttctgtaa cccgcaccat
     8641 taactcaccg cctttacggg cgcattgggt tgcacaatcc gcctgtatgc tcgccattcg
     8701 ggtattatcc gcattgtttt tggtactcgc cgccatttca tccatactgg cggcagtttg
     8761 aattaacgag gccgactgct gttccgtctt tacggatagc gacagactgc gcgccgccag
     8821 ttgttcggaa agggtcattg ccgtttgcga agaggatctg atttcacgta ccagcgcgga
     8881 aatattctcc gacaggctat taatcccggg gatgagtcgc ccggcgcaat tattgccaaa
     8941 ttcggagata tgaatagaca agtttcctgc tgcgacctct tcaatacttt tcttcgcggt
     9001 attaattggc actaccagat agcaggtcat ataccaccaa agcagtaatg ccgagatcag
     9061 ataaatgata ttacacgtaa ttaaaatagg gagatcgtgc agaaaggtta tttgtaaagt
     9121 atccactaaa agaaacgtac ataccatgaa tagaataatg catgtcctga cgctgatatt
     9181 tctcaacatt tttgacggcc tacaaccagg ataggagaca ggttttattt ttatagcatt
     9241 tcagatacct attgccattc gtttctttga cattctccat attcaatacc agaccatcgc
     9301 catttccctt agtgcaatag ataaaatcat ctatattcgc tatgccagga tattcatcca
     9361 tccatattga caagtgatgt acttatcacc attttctgct taatagttaa gtcgaaagcc
     9421 agtatatttt aatagacgct taaataagtg aatgactgtt tctccgtgtt attactgtgg
     9481 acagcgttat cgcccgttct cttgcagaat cctgagcgtt tggatgaggc gttatatcag
     9541 gcataaaatc gggttcatgc gagcttgcgc tggcggtcct gtccgccagc ggcaacgatt
     9601 taccgactac gcttcgcatg gcgctcccag ttatcctgtt tagcctgcac cgttttacgt
     9661 aaagcgacat aacatgcccc gccgccgcca tggtgcggca gcgccgaaca ataagcctgt
     9721 acatcctcaa actctgtcaa ccagcgggcc acatagcttc ggacgatatt ggcatgcgac
     9781 ttcgcctctc gccctttacc atgaatgatc aggacattac gcaacccctc tttctgcgcc
     9841 tccaggataa aacgaaacag catttttcgg cacgtttcga ccggttggcg taacaaattg
     9901 aggctggcct gctgagggta tttcccactg cgtaacttgt cgatgacacc ctgctgcaat
     9961 ccttcccgac gaaattccag cggttcattc agcggcagaa tatccagaaa gcccgtcgtc
    10021 aggaaattat caagctgaag cgtgtcgata cgctggggcg ttttaagatt acgcgttggc
    10081 tgccagtgta catcagtatg gcgtttcagc ggctggacat cctccatgac gtcaagaaac
    10141 agcgctttat cgtcaaggtt catggttcat cctccagcgt ttttgcgact gccgttatca
    10201 taaccgtgcc ctgttatacc gacaacggtt tacagttatt tccaataaca gcgacaatgt
    10261 caggcaatta accgtctcgc caggctccct ttttctccgc caacgatatt actgtcgcta
    10321 aatgtgttat ccctgactat cttttaagga gtatggttgc gggtattcct ggcatgatat
    10381 cttgtctctt acgttagatt aagacgatgt gagagaacgg atgctgagat tacttgaaga
    10441 gaagatagcc acgccattag gtccgttatg ggtggtttgc gatgagcagt ttcgactgcg
    10501 ggccattgag tgggaacagt accgcgatcg tatggagcaa ctgctaaata tccactaccg
    10561 tcacgaaggc tatgaacgcg tttctgcgac taaccccggt ggactcagcg ataagcttgc
    10621 agattatttt gcaggcaatc tcgccgtaat tgataccttg gaaaccgcca cggggggcac
    10681 accttttcaa cgggaagtat ggcaggcgtt gcgcgctatc ccctgcgggc aagtgatgca
    10741 ctatggccaa ctggcggcgc aactgggacg accgggcgcc gcacgcgcag tgggtgctgc
    10801 gaatggcgct aaccccatca gtattgttgt tccctgccat cgcgtcatcg ggcgtaacgg
    10861 cactctgacc ggatacgcag gcggcgtgca gcgaaaagag tggctattac gccatgaagg
    10921 ctatctttta ttatgaatat acaggcaaaa agtgccttat cggtcacact tttatgtaaa
    10981 gtagcaacaa ataaattacg tattttcaaa tagatataag tattcatcaa acttatactt
    11041 gaattattcc ttctccggga tagctcagac ttacgcgctc accaaaaaga tgttaaaatt
    11101 gacaaatatc aattacggct tgagcagacc tatgatcccg gaaaagcgaa ttatacggcg
    11161 cattcagtct ggcggttgtg ctatccattg ccaggattgc agtatcagcc agctttgcat
    11221 cccgttcaca cttaacgagc atgagcttga tcagcttgat aatatcatcg agcgcaaaaa
    11281 gcccattcag aaagggcaaa ctctgtttaa agcaggtgat gaactgaaat cgctctatgc
    11341 tatccgctcc ggaacgatta agagctacac cattaccgag caaggcgatg agcagattac
    11401 tggattccat ttagcaggcg acctggtggg ttttgacgcc attggcagcg gtcatcatcc
    11461 gagctttgca caggcgctgg aaacctcaat ggtatgtaaa atcccctttg agacactgga
    11521 tgacctgtcc ggcaaaatgc ctaacctgcg tcagcaaatg atgcgtctga tgagcggtga
    11581 aattaaaggc gatcaggata tgatcctgtt attgtcgaag aaaaacgccg aagaacgtct
    11641 ggctgcgttt atttacaacc tgtcccgccg ctttgcgcag cgtggttttt caccgcgtga
    11701 attccgcctg acgatgaccc gtggcgatat cggcaactat cttggcttaa cggtcgaaac
    11761 cattagccgt ctgctggggc gtttccagaa aagcggtatg ctggcggtga aaggtaagta
    11821 tattactatt gaaaacagcg atgcgctggc ggccctcgcc ggtcataccc gcaacgtcgc
    11881 ttaaacgtca gctaaaccat tgatgttatc ttctgccata tcgttaaatt tttctcattt
    11941 attgatctgg cagaagcgct tcccctgttt cattcaccat atttgagtta ctctttagtt
    12001 acaaactgcg atgacagttg taaggagacc ctgtatggct atgtatcaaa atatgctggt
    12061 ggtcatcgat cccaatcagg acgaccaacc cgcattacgg cgagcagttt atttgcatca
    12121 acggattggc ggcaaaatta aagctttcct gcctatttac gatttctcgt atgagatgac
    12181 caccctgctt tctcctgacg aacgcaccgc aatgcgtcag ggcgtaataa gtcaacgcac
    12241 agcctggata cgtgagcagg cgaaatatta tcttgaagcc ggtgtcccca ttgaaataaa
    12301 agtggtctgg cacaatcgtc cctttgaggt catcatccag gaggttatcg ccggcagtca
    12361 cgatctggtg ttgaaaatgg cgcatcagca cgatcgactg gaagcggtca tttttacccc
    12421 taccgactgg catttgctgc gtaaatgccc aagccccgtg tggatggtca aagatcagcc
    12481 gtggccagag ggcggcaaag ccctggtcgc cgtgaacctg gcaagcgaag agccctatca
    12541 caatgctctc aacgaaaagc tggtaaaaga gaccttacaa ttggcggagc aggttaatca
    12601 taccgaagta cacctggtcg gcgcctaccc cgttacgcca atcaatatcg ccattgaact
    12661 gccggaattt gatcccagcg tgtataacga cgccatcaga ggccagcatt tactggcgat
    12721 gaaagcgctg cgccagaaat tcagcatcga tgaaaaagtt acgcatgtag aaaaaggctt
    12781 gccggaagaa gttatcccgg atcttgccga acatctccag gcggggatcg ttgtgcttgg
    12841 caccgttgga cgtaccggac tctcggccgc gtttttgggg aacacggccg aacaggtcat
    12901 tgaccatctg cgctgcgacc tgttagtcat taagcctgat gagtatcaaa caccggttga
    12961 actggacgac gaggacgatt aatccctctt ccgtcctgcc ggatggcgct gccatccggc
    13021 caacacctca ttcctgttac tcatctccgc cgaggaaata gatccccaaa ggaatcgcca
    13081 gcagaatagt gaacaccaga ctgtaaacga aaatcattgc cgactgaatg gcatacatag
    13141 agcttgtcca ctcggacagt ggaatatgat attgctcaat cacaccgccg atagtcgcgc
    13201 gcgttaccac cgatgccgca acgataaaca ctgccagcag gcataacaga aattttttcc
    13261 ccttcgccga tttcagcttc atcatgatca tagtattgtc ctttacagat gactttgtta
    13321 cctgatagca acaataccat gacaatcacg cgatgtctgc tccataaaac gtaacattgt
    13381 atttacataa aaagtaaacc gctgagatta aagctgatag cactatttct tctttttact
    13441 tatcgatgat ctacgcgttt atcctgggta aaatacctgt taatcaggtc attctgagct
    13501 gttatcgtag gaaggagcgg aaaacaataa tgttcactga attttttctc aaaaacgcat
    13561 ttaatctggc gatacttttc agttgcggta tggcgttgct ggtcgtgaga ttttggctca
    13621 gccgtaacgt acagtggaag aaaggattca cgttccatgc ggcacagttt tttatttacg
    13681 cgattattat tggaaccatc gggagcatcc tgaataatgc tattgaagat tataatttgc
    13741 gttttatctc ttccggggtc attgatttta tctgcacctc gctcattgcg cttattctga
    13801 cgataaaact tttcctgatt attaaccaat ttgaaaaagc acaggtcaat aaaggtagag
    13861 atgtcaccag tacccgtatt ctggcacggg tcataaaaat aaccattatt gtcgcgattg
    13921 tcttactgta tggcgaacat tttggcatga gtctgtccgg tctgctgacc tttggcggta
    13981 tcggcggtat cgctgttggt atggcgggca aagatgtcct gagcaatttt ttctccggta
    14041 ttatgctcta tttcgatcgc cccttcagta tcggagactg gattcgttct cctgacagaa
    14101 atatcgaagg tacggtcgcc gaaatcggct ggcgaattac acgaattaac acattcgacc
    14161 accgcccgtt gtacgtgcct aattccgtct tttcatccat tagcgttgag aatccgggac
    14221 ggatgaccaa ccgtcgaata aaaacggtta ttggattacg ttacgaagat gccgacaaaa
    14281 ttggcctcat tgttgacgct atcagaaaca tgctgcaggc gcacagcgat atcgatcaga
    14341 aacagacgct gttggtctat tttaatgaat tcgccgactc ttcgctgaat attatggtgt
    14401 attgctttac caaaacaaca atatggcagg aatggcttgc tgtacagcag gatgtttacc
    14461 tgaaaattat tgcgattgtc caggaaaacg gcgctgactt cgccttccca agccagacgc
    14521 tatatatcga tgacccggag gccgcgcctg cgataaaata aaagatagcc ggtgcccgat
    14581 aacgcttatc gggcaccgag gcttccctgt ccggatgacg ggttgttagc gccttcctta
    14641 cggtgatcaa cggctctttt cattcaccgt catggtaaat tcaagcacct cattagtgtc
    14701 gttaacgtag gcatgaggca tatcggttct ggctacagcg gagcagccct cccgaataat
    14761 aaagcgtcta ccgtcgactg ttaatgtcag tgttccctga ttaacaaaca gtaattcaca
    14821 ggtgtctgcc ggatgccctg ccgactcaaa ctgttcacca ggatgcatta tccattgcca
    14881 tagttccagc atatccggcc cgctggttcc cgccattagt tttgcactgc cgcctttctc
    14941 gccgcgccac aacaccggaa tagcatcccg gttgataaga tgaaccatcg gctcgctggc
    15001 gacgttgaca aaatccgcca cggacactcc cattgccgcc gcgatcttac ataacagcgc
    15061 aatgcttgga ttagctttac agccttcaat ttccaccagc attcctttac tgacgccgga
    15121 acgccgcgca agctcatcca gcgacatctt tttttggcta cgaaattgtt tgatacgttg
    15181 ggaaacagct tcatttattg tgctgacgtc ggcgcccgcc gtggtcgata agttgacttt
    15241 tttggtcatt ggtcgatatc atagaataaa atagtcatta caggattatg cgatgtcttc
    15301 tatgttaccg tcaatcagcc cggaactggc ccgtatcgct cccggctttc gtgcattaag
    15361 tattaatgtt attgccgctc cggttcgcga tgcgcaggtc ggagaaatcg cgttaaaaga
    15421 ggcctgtcag gccgtaatta acggacaacc ggcgtgggca caggcgcata tagacgcctg
    15481 gaatgcggtg tttaaagcat tcggcgcaaa accaaagcgc accccctgct cggctgaagc
    15541 gctacgaaaa cgcgtgttga aggatggaac aatggcggcg ctggacccgg tcgttgatct
    15601 ttataacgcg gtgagcctgc gctatgccgt gccggtaggc ggcgaaaata gcgcggctta
    15661 ttgtggatcg ccgcggctgg ttttcgcaga cggtagtgaa acatttgata ccctgaaaga
    15721 aggaaaaccc gttaccgagt cgccagaacc aggcgaagtt atctggcgcg atgacagagg
    15781 cgtcacctgt cggcgctgga actggcgtca gggagtacgt acccgactaa gcgcttcaga
    15841 taaaatgatg tggtttatcc ttgaaagctt gccggaaatg ccggttgatg aattgtacgc
    15901 ggcagaaaac atgctgactg acggccttga aaaaatgatg ccaggtttac gttttgaatc
    15961 cacgttgata ggtgtttgat tgatattgcg taacaggaga aataccatgt cgctgtttct
    16021 gacaagtttt attttcgaaa aaaaagagta cgacgaagag ttttatcaac tggatggctg
    16081 gattgagcgc tatacacaga ctattgatgg ctatattggg atggaaagct ataccgatgc
    16141 cgccagcgga agaatggtta ataattatta ctggcagacc cgcgaatcaa tggagctatt
    16201 gataaataat ttacagcacc agcaggccaa atcacaaagt cataagtggc tttccggtta
    16261 ccagacgatt attgcagaaa ttcaggggtg ccataacgtt aacctgcccc atccgctggc
    16321 atcattttca gttccctatg cgtgatgcaa tagtatatgt attaaatgtg ggggcacaca
    16381 ggagaatgcc tgcgcccctg cattgccagt tattcggttt tctgtgcagg ggcggcgctg
    16441 atataagtga ttaatagaca ggaagatgag tgatatctcg tggtacacta acatgcgtaa
    16501 ccacattgtt ttcatcgcac tcaatcaacg ctctggcaaa aatactgagc tcattaattt
    16561 tcagcccgga attatccaaa aactggcggc aagcgtagtc agaaacaaaa attatgccgg
    16621 gatgaatatc atgttcccga ataaaacggg cctgagcaaa tggcgtatcc atactcaaca
    16681 catatactgc ccggtttgag tggctacccg ctgatttaag gcggtcacta tattctttta
    16741 cctgccattc acaaaccggc gtatccagtg acgggacgac aataatccgc ttttttatcc
    16801 ccgggataca gtaacccggt aataaattat ggctcaccag cccctttgtg cagggtaatg
    16861 gttcgccttc agccagtata ccgggtttga gggtcagttg cgttttgcca aaggtcacag
    16921 cgtgttcctg acccaatgag atataatctt gtgttgttgt tggcgtcata aaaacttctc
    16981 cttttaacat ttgtattatt ttagccataa taattattta gcaatccgct aaaaaaccag
    17041 gtgaacatcc ataataagat gatggtgata aaaagaatta tattagccat aatgattaat
    17101 atagttttat agtcttcctc tgatggaaat ttctttcctg aacaaatccc ctgcatattc
    17161 aaaagatatg tcaatacgtt cgttactatg tccacgatag gttataactt gtgtatattt
    17221 acctggcaca ttttctttct taatagggcc ataatcccat aagccttttg aattttcata
    17281 ctttacagtc ttatcaatga gaacttcatt tacaggattt ccgtcgatat ccttaacaat
    17341 agttgtgatg gtggcacttt cacccggcga taatacaggt ttatctatac tcataactgt
    17401 taaatctggg cttggcgtat tagatatagt ttctgtttca atatactgaa attcagatac
    17461 cgatggcaca ggcgtgtacc ctgacgctga agccatatcc gtttcattat aaatttctag
    17521 tttaatcttt gaaccccgat gttccttttg gatattaaat ttatgctcac atggcttttc
    17581 acgtttaagt atatgctgag aattatcttt attgatctga taatacgtac atactgtagt
    17641 aaacgtttcc gcagactgat agttattatc cggatcgctg atgcctagat atctatcatc
    17701 cctcgcaata gtcattcccg gaaaaggtgt atacttttca atagaaaagt caagtccatt
    17761 aaacttcaat tcgtaggtat cacgaggtgt tcctggtctg tgcccaacgc tcggcgccgt
    17821 aggaggagaa aacatcccga cggttgccgc ggaagttgtc gacgaatccg ccaagacgct
    17881 tatcggcaca gccgccagaa gcaggctata gataataaga ttatgtttcg acatacgcac
    17941 tgttgatcct ttttaaaaca ttaattcgca tcagaggttg cggtattacc cttagcattt
    18001 cccttatcag aaataattct gacgcggata tatttattct gaagcgattc cccattaaga
    18061 ctataaggaa gaagccaggt ggcctttgtc gcccccggta cggattgcca ggatttcatt
    18121 tcatccgaga tttcccactg ataattaaac gcatcagtac agtccgtgtt atttacacaa
    18181 agcgttctgg ctcgcatttc tgttccgacg actggcgcag taacgcttcc gttggcttct
    18241 tcagtaccct gcgtaaaaag cacctccaca gaagtgacct tctgcgcaat actgtctgac
    18301 tgcgcttgta gtagtacggt acccttcacc ggatgtttat cgtctggtcc gcttgcttca
    18361 atatgtaatt tgagcgagcg ggcatcatcg ccgatatggg tcaccagaac ccgttcaacc
    18421 caatggccgt cacgctctgt accaccgagc gctttaaatg ccagacccgg cgtatctgat
    18481 tgatacttaa tatgacgtgg tttgagcgac gcccactcct cttcagaacg ctcgcgcacg
    18541 tagtgccact caataacctt cccctcttct ccggcaggaa gcggcgtact gataacaaag
    18601 ttgccgtcct caacctgaac atcgtcattg ataacattta tccaggaacg gaaactggtc
    18661 tcatcctgtg tcacccttac cgggatacgc tcggaggtca cgcgagtacc ccggctgtca
    18721 gtcaccgtta aataaaggct atactcctga ccgtcggtcg ccgtcagcgg aagttgagga
    18781 aggataaggc cgctgcccaa actcccctga agctgaagtc cggcgagaag ttccgcatca
    18841 cccgaccact caactttctc aatcgggtaa cggctatcta ccgtcgccat taatatcacc
    18901 agcgtcccgg acaggcctga caccggcatt gccataatgc ggattttact ggcctgctcc
    18961 cgatacgcca tgacgatatc gtaattacga tcgacaaagg cacgccgatt agtcgtattc
    19021 gacggcgccc caacgttgcg gtaatcaagc tgttcatgta acggcgtacc gaaggaatag
    19081 ttgactctca gaccgccctc tgcctgcgat ccgccgttac cggcgtcccg atatcctgct
    19141 ctgacctcaa gcaaggggac aggattccag accagagccg cacctgcggc gcggggattc
    19201 cggcttaatg taccgttacc caatagatca actttatccc cgtaatactg ttcatatgtc
    19261 agctcgccac tgaaccaggg aaaatcggga agcgtgcctt ttgttcgcag atcaaagcca
    19321 tatgccggac gctcatcatg taattcatga actactgacg ttttccagcc ggtgagaggg
    19381 aaataatagt tgccggaaaa ggccagactg tctttataga cttccccgcc aatgccgcca
    19441 cgcaagtggg aataacggat gtcggcatcc agaaacgtat tgacgccgag cagccatcca
    19501 ttgacctcct ggcgataacc cacaccaacg ttaacatagg tgcggccatc gaaactgctg
    19561 ctgtcgtggt cgcgaaagcc aagctggcca aagagtaaag acgatgttgt ttcctggacg
    19621 ggaataaaca tatcgaactc tgatgagcga tatttcgcgc catcttcaag attgacgcca
    19681 ccacggaaaa taatctccgg aaaagcgctc ttcatcccct cgttcaccag atgattagcg
    19741 gcttgccctg gtaatgcctt tatttttcct ttggcataat cctccagcgt cccctcctgc
    19801 agatgcggag aaatagacga tgccgtccct gcaatccatg actgaatttc attatcgcta
    19861 tcagcgatga ccggcagtgg aatctgactg gtaacaatgg cccaggttat atatttagta
    19921 atgggttttt tagaaaaaac cactttattg tctcctgcta tatccccctg cctggcagag
    19981 ggagtattta aataagatgt ttatttggcg ataaccatca gcgacggata gcgcgtttat
    20041 tctccggcgt ggctttcgtc gttttaggcg taacgtggac acggaacagt ttattctgct
    20101 cagttccctt aataatatat ttatgctttt cagcgttggt attattcaga tcggtgaacc
    20161 tatctggtgt cccggcatcc gccatctgcc aggtaaagtt ataattactg acctcacact
    20221 cagccgccgc tgtggcggca cattccagta ccacttcaag ggtgccgcct accactggag
    20281 tgttggcgtc attggtaccg ttgagttcat cagtcggttt accactttca ttcaccacat
    20341 tgatagtgac agaacgtagc ttattagaaa ttgtaccgtc tgcggcggag tcgccgctca
    20401 ccccagaaga tgcagaagtt aataagacag tggcaggcaa gaatgcacta tccggcgtcc
    20461 ccgttgccgt cttaatccgg taaacgattt taattttttt accgcctgca taagcaggaa
    20521 tggtaaaagc cgtcccggtt gccgccgggg ttccagaagg atcggcggcc tcattatcca
    20581 ccagatacca tttaatatcg tcggcattat tcattttatc cagcgataag ggatccccat
    20641 cctcatcctc aataaaaaca tccgctatct ggagggttga accggtcgtc agttccccag
    20701 acacttctat cttttttgca ttagtagttg ccacaggacg gtgaccaaca gaagcaggcg
    20761 tagcagaaga agccatatca ttggctctga tattcgccac cgcctctact gagaccacgg
    20821 atgcacaaat cgctaaagct aataaagatt ttttgaagta caaaacaatt catccctttt
    20881 attaaatcat tagaaataat tatgagattt ataatctcac gggctaaaaa ttcaggatta
    20941 ttcaatcatt ttaaccgtct gtgaaattat gcccttcgcc atgccaatta cttagcttta
    21001 ctggcaaaag ccgatctcca agtgtaaagt ttattcagaa acgtcaagca atttaaatct
    21061 ttcttgtttt gccagaaaag ctaacaaccc cccactggtt taataacacc gtatgtcaaa
    21121 caccttaaat gtttatattt tcggcttcaa taaagaggaa tgatgatgaa aagagccata
    21181 atagtctcag tattagagca aatagaaaaa aatcttgaag agaggattga tattgaaaag
    21241 ttggttgtta taacaggtta ttcgcgaagg agtttgcagg atttttttaa agaaaagtgt
    21301 ggcgtctcta tcggaaaata tatcagacaa cgcaagttga gcagaagcgc cactctgcta
    21361 aagctgacct ctcagtcggt cacagatatc gcgttcagaa tggggtttga ttcagtgcag
    21421 tcctatagtc gagagttcaa aaaaacattt ggcgtcaatc ccaataacta tcgcaaggct
    21481 gatttctggg atctcagaaa cctacggcct ccctactggc ttgactgtga tgggcattat
    21541 cagttcgaaa tttgtcagct tacgtcaaaa gaaattttcg gatttcaaac atctcatcag
    21601 atcgcaacaa atgaccttcc taaaaaagcg tcgcctataa aatggaaaat cattcatgag
    21661 acgctcagga cgtggggcga aaatgtgtat tgtctctcgt cttttaagcc ggataatacc
    21721 aaagaccagg tcatcgccgt aagcagtttt tttggtatgg aacataattc cgtcgatgga
    21781 ggaaaaatac ccatgtcgag ggtaataaaa tgtggtaaat atgcaaaatt ccatttcgtt
    21841 ggtcataagg aacaatatca acaattttcc aatacaatat atatgtgtat attgccaaaa
    21901 ctgaatatta tcagaagaga aggagaagat attgaatact tccatttggc atccgtccaa
    21961 aagcaacaga ataatgaatc cattgtcgat ctttattatt acatccctgt actgtaatga
    22021 cttcgtacta tccacgcatt tcatctgaaa agtcttctct tttcagaacg gtaataaaac
    22081 tctcagtatt gattctggta aaataagtga ctattaatat aattaacgtt ttgaaagaat
    22141 taaaaaaaat aaattgcgtg cacgcgacac cggggacaga tttctgacag tactgtacgg
    22201 tgtagtgatc aggtaatatt ggctacagtt tacggtaaaa gcaaagtcca tactttaact
    22261 attaatggga gtatgctggc cgggcggctt gcggggcctt catgctccca catttacaat
    22321 gttggtatga ttacattctc tctatacttt actgtgctaa ccttttatct cgttgagata
    22381 ccgtttaatt taaatgttct ctttttgatg tacattataa gaggagacat tattcatatt
    22441 ttcgaaatca gggcagacga tatgtataca accatcagaa acacaacgct agcaatggta
    22501 gcttgttttt cgtatatcgc acatgccagt acccaccctc ctcttattat caccagggga
    22561 gccggaggag acgcctccgg agccgcagtc attcatgata attggcggca tggcactcct
    22621 gacctggtca atcttaccga tatccccata gataaaatca gaccagaaaa ataccgttgt
    22681 gtactgatta ttgggcaagg agctataaaa gagatgcttc ttgcgaacaa tgcctcagca
    22741 atactttccg gaaaaactgt tggtctttat actcatctga tcgatcagaa cacgctcaga
    22801 ttacttcggc aattgcagaa caaagtgaga ttcaatctct tttttacccg ctcgcagata
    22861 actctactaa aactaaggaa catttcagaa tataattttt tgagttctaa agtaaataat
    22921 gtctggggac aagactcact agcaattgaa acagtggcac ctgacagggg taatataccg
    22981 gaaaaagcgc ttcccctcaa aacaacggat tatgtgatct ggctgggtgg aaactatact
    23041 acctcttctg gtacgcagcg tatcttcaca aacgatcaga ttgttgtagc cctgaaacca
    23101 ctacataatg ttatttcacc aaatgcatcg attgctatta tgctttcacc acgttttttt
    23161 gataatagca tgagtaaaga agcaaaagtt aaacgactga aggcagtgct taacaccttt
    23221 tcgcaaaata gggtcacatt ttatatgagt aaggagatgc ttgctaatct gaaagaattt
    23281 gatttgcctg ttcaactatc cccttcttac gcagagctga tgcgaatgcc ctgggccagc
    23341 gctacccggc attttgcctc tgtggatcaa tataacctgt ttgctgatct catacctaaa
    23401 gtcacgccgt ttcttcttga accgaatgat gccgatcaag ctctctatgc gacggattat
    23461 cttaataccc ggcgtgtaag tctgacccaa aatattctta accatggttg tgactaaata
    23521 aaacgcgcag aatccgggat agttagcaat ccaaaacaga ccgttagcca tgagtactgt
    23581 ttatcttcac tatacaggga acaaccaaat aactgacaac acaaatcaag ccgagacccg
    23641 gaattcggct atacaggcgc tctattcaat tcaggcccag aaacagtccg gtacccatac
    23701 tggacacggc ctcccaactg ctttagcgca ttaccagtcc agcttcgatg cgccttctgt
    23761 cgtctgcact atttcactgg ttttaataac gcgatgataa ccataaacat cagcgtattt
    23821 cgtcattccg gttgcggtgt caacctccgg cttaccctgc gtttcaataa tctctcccgt
    23881 ccgggtcgtc atggtatagg tcgttgtaca tccggctagc atcaacactg ataagctaag
    23941 taccgtaata agactacact tttgcatttc ttgtttccct gacacctcta tttttgatgt
    24001 actttaccga ataccgcaac ggcaagatgg atgattaggg ctattgctcc ctgtttgtcc
    24061 gtatctgact ggctcaggtt ttttgatgcg ctgcgttaat ccggcagtaa tcgctccagc
    24121 acatccccag ccagaagcac gctctcctga agacgctcca ggctataccc cgctcgcgcc
    24181 ttggcggaaa gtcccgccat tagcgtcccc ataaagtccg tcgtccggtc agcctcttgc
    24241 ggataccgca tggcgacata agtgcgaatc aggttttcag cagcgatgta aaactcgcag
    24301 gcggcctctc gtgccggttt atcgttacaa tgagcgccct ccagaaccag acatccggtg
    24361 gcatcaggat cggcagcgta acgtcttgcc gcttccatca gcacatcgat aagacacttc
    24421 gcggtcgggc gatcgtgacg cagaagcgcc ccgagcggaa tcgcgtcggt catcctgtaa
    24481 cgctttaata cgcgagtata cagccccagc ttgctgccaa acgccgcata gaaactggga
    24541 ggattgatcc cgaacgcttt tgtcagatcc gctacgctca ccgcgtcgta tccgcgcgaa
    24601 tgaaataagt gttgagcggt ttcaatggat tgctccggat cgaactggcg agggcgaccc
    24661 ggcgttcggc tatgttttgt agtcattact acataactcc ttgacggcat gatttcatta
    24721 cgcatattgt agtgactact acaatatcat aaaggacatc ctgatgatgc tatttcgcaa
    24781 caaatctgta ctggttttag ggggaagtcg tggtatcggc gcggctattg tacgacgctt
    24841 tagcgctgac ggcgcatcgg tcgttttcag ctacgccgga tcgcgtgaag ccgccgaaaa
    24901 actggcagcg gaaaccggaa gcaccgccat ccagacggat agcgccgatc gggatgccgt
    24961 catcagcctc gtgcgtgagt acggaccact ggatattctg gtcgtcaatg cgggcgtggc
    25021 tctcttcggc gatgcgctgg aacaagatag cgatgcgata gatcgtttgt tccgtattaa
    25081 tatccatgcg ccttaccatg cgtcagtcga agcagcccgc aacatgccgg aaggtggacg
    25141 cattattatt atcggttccg tgaatggcga tcggatgccc ataccgggaa tggccgcgta
    25201 cgctgccagt aaatcagccc tgcaagggct ggcgcgcggc ctggcccgtg attttggccc
    25261 ccgcgggatt acgataaatg tggtgcagcc aggccccatt gataccgaca tcaatccgga
    25321 agatggcccc atgaaagagc tgatgcacag tttcatggca atcaaacgac acggaagacc
    25381 tgaagaagtg gctggaatgg tggcatggct tgccggtccg gaagcttctt tcgtcaccgg
    25441 cgcgatgcac accatcgatg gtgccttcgg cgcctgacgg ccaggcgaat atcacacggt
    25501 tgccgtctac gctccggcaa ccgtgttaga agctgttcat gcgagaaaac atccgcaagc
    25561 gccgggatca atcgtggatt ttaacgccaa gacaaccgcg aacaaattca ggattaaaat
    25621 gcttcaccgc ttcgccaacg tagcctaaat caagggcgtt gatttgagcc atttcgttat
    25681 ccgttagtga gaaatcccag atggcaaagt tctcttcaat acgttcctgt cgagtggatt
    25741 taggaataac cgtgacgcca cgctgcacgt tccaacgcag gacaacctgc gcgatggttt
    25801 tttgatgggc atcggcaatc ctttgaagca tgacattttc atacggttta tgtctcccgc
    25861 cgcctaacgg tgcccacgct tcaggctgaa cgttataatg cttcatggtt tccagcgcgg
    25921 cgggttgtgc aaagtatgga tgcaattcga cctggtttac cattggcgta attctgacgg
    25981 tttcacagaa gttggctaac acatgcgcat agaagttgga cacgccaatg gcttttagtt
    26041 taccggcttc ataagcgtct tccagcgcgc gccacgcgct aaaataatcg cccattgcct
    26101 gatgcaataa atagagatca aaataatcta acccggattt tttcagcgac gcttcaatac
    26161 ctgctttggc cagatcgtag ttagccatat cttgcaccca cagtttagaa gtaataaata
    26221 actcctcacg ggtacacaga cctgtcgcga tggcttcacg aacagcgtca ccaacggcat
    26281 cttcattgcc gtataccgca gcggtatcga taagacgata accgctgcga atagcgctta
    26341 acactgactg ctgacattct tctttgtcgg ttaccttaaa aacgccaaaa cccaccatag
    26401 gcattttaag gttgttactt aatattgaat attccacgct aaagcaccct ttcgtcgtaa
    26461 agacgccatg ataagagcaa aatacaggta caatgagtat tgttaaatcc gattatattt
    26521 atacaaaaag ttcattaata acagttgtac agatttttta ttgcatccaa acgttcagtg
    26581 cttgctatat cctcgccgtg tagcacctgt ttgataatgc cttttactta tgcgtcaaaa
    26641 accagtaccg tcattttgac cgtctgtgaa aaagttttct gaacaggcaa tgcgatatcc
    26701 ggaataatat tttttagcga agaggctccg gctggctcag cgccgttttg caccagtcat
    26761 aaaaagcgcg taccgcaggc gacagaaacc tgttttgcgg atagaccagc gcaagcggca
    26821 aatcataaaa atggttgtcc atgcaggtca ccagcgcccc gctgtgcaga tacggcgcaa
    26881 ccagatagct ggcgacgcga attaacccca gcccctgtat tccggcctga atataagcgt
    26941 ccgtatcatc gacaaccagc gtctcctgca cccgcatcgc gtaatcctcc ccctcacgcg
    27001 taaaaaacca gtcggtggta cgcccggtgc ggtggttcag gtagccgact gcatggtgtt
    27061 tttgcagatc atctaaattt tcagggctac cgtaacgctc aatgtaagtg ggcgatgctg
    27121 ctatcaccca gttaaagctg gcaagtggac gggcaaccag cgtggtggaa tcatcgattc
    27181 tgccggcccg aatcacgcag tcataccctt gaaggataat atcctccacg ctatcgctgg
    27241 aacaaagtat cagctccagc tccggatact ggcacaaaaa ggccgggagc gtaggaataa
    27301 tgcaatgccg ggcgagagat tgcggcatcc ccactttaaa acgccctttg ggttgtgccg
    27361 cccggccagg aaatgacgac tccatggccg cgatatctgc cagcactctt ttgcactctt
    27421 cgtagtaacg ccgcccctct gcggtcacgc taagtttgcg ggttgtacgt tgcaaaagtt
    27481 gaatcttaag ccaggattcc agttctttaa ccactcgcga taccgttgag cgcggcacgc
    27541 caagcacttc ggcggctctg ataaaactat gggtatccac tacgcaaaca tagacctgca
    27601 tcgcttccag cttgtccatt ttccccccgc caattatccc atttatcaga acagtctaac
    27661 ccgtcttcgg cgtcttatcg aacgcagatc cctgacgtaa tctctatcta caggtgaatc
    27721 aacacagaga ggcgcaaatg aaacaatcca ataatcaggt gggtgaaaaa gtattggtgc
    27781 tgggcgcggg acaactgggg gcgtcagtgc tggcgtcgtt ggttccggcg atcacacagc
    27841 gtaatggttc cgtttgcgtt attgtgtcag ggcgatccag ggataaacag agcaaacgac
    27901 gttccagcat tcatcaacaa ctggcggatg ccggtgcgcg gtttatcccg gtcgacatcg
    27961 cagacagttc ggttgcagcg ttaaaagatc aattccacgg ttttgatacg atcatcaatt
    28021 gtatggggtt tgtcgccggt gcgggtaccc agataaaaat cacccgcgcg gtactggagg
    28081 cgggcgttaa gcgctatttc ccctggcagt ttggcgtgaa ttacgatgtg gtcggcaaag
    28141 gcagcggcca gccggtgtgg gacgaacagt atgacgtcag gacgcttttg cgcgagcaaa
    28201 acgtcacaga gtgggtgatt gtttcaaccg gtttatttac ctcttttctc ttcgaaccgg
    28261 cctttgatgt ggtcaactta gaccaaaaaa ccatcaatgc cctcggcgga tgggaaaggc
    28321 aggtcaccgt cacgtcgcct gcggatattg gtcgcctgac cactgaaatt tatctgcatc
    28381 agccgcgtat cactaacgaa gtcgtctttg ttgcggggga aacgacctct tatgcaaaac
    28441 tggcgaaaac ggtcgaacgc gtgacgcagc aaacctttac ccgaggtgta ttgacgctac
    28501 ctgacttaca ggagcaactc cgtttacatc cgcatgaccc aatgctgcgc tatcgcgtcg
    28561 ccttcgcgcg tggtgacggt atgtggtggc cgatgagtga cacctggaat gcacaacatc
    28621 atctgccgac acaggatatt gccacctggc tgaaaacaca gcaatgagaa cggcggcatc
    28681 aggcgctcgc ttaatcccca tgccttctgc cagcatcagg cggcgggcgt ggctaccttg
    28741 agttaacaag aaaccagtac gcatcagtgc ttcacgatat acattgtacg gctataggcc
    28801 acatcttccg ggttagtaat ggggtatccc tttacccacg gtttaattaa ccggccattg
    28861 gtatactgat aaataggtgc tataggcgct tgttccgtta aaattttctc cgctgcattg
    28921 taatccgcgt tacgcgcttc ggcggtattt tccatcgtcg cttgcgtcag gattttgtca
    28981 taagtcggat tagtaaagcg tgaaatattc cccgtatgcg tggacgttaa taaggataag
    29041 aaagtcgacg gttcgttgta atcacccacc caggagacgc gaataacatc aaaattactg
    29101 gtattccggc tgtcgatata cgttttccac tcctggtttt gcaatttcac atccaccccc
    29161 agatttttct tccacattga cgccaccgca atcgcgattt tctgatggtt ttctgaggta
    29221 ttgtaaagca gagttaattt aagcggcttc tgcgatccgt agcctgctgc acgcagcaat
    29281 gttttcgcct gggcgttaag ttcttcctga ctcatttgtt caaacggtga aggatcgggc
    29341 ttaaatcctg ccgtgacatc cggtgtaaaa tgccaggccg gtttttcacc ggtacctaag
    29401 actttttccg ccatcaaacg gcgatcaatg gtcatactta gcgccagacg aacgcgggaa
    29461 tccgccgtcg gccctttctg cgtattaaac gcataataat aagtccctaa ttgcggcggc
    29521 gtataaactt gccctggaat atccttcaat aatttctggt acatattttt agggaaagat
    29581 tcggtgatat caatatcacc ggcaagatag cgtttcgtcg cagccgactc ctggttaatg
    29641 ggtaaaaatg tcactttttg cagtaccgtt ttcgcgttat cccagtaatg cgtattaggc
    29701 acgaccacca gtttttcatt taccacgcgc tctttaagca catacgcgcc attgccaatc
    29761 agttttcccg gcttcatcca gtctttgccg ctttcgacat tcgctttttg gaccggataa
    29821 aaggcaaaac tggcggtcag actggcaaac cagggcaacg gcttgtcaag ctgaacacgc
    29881 aaagtgtgcg cgtccacggc actgacgcca agctgatccg gcgtgacttt actgtcgata
    29941 atggcttgcg cattagtgat gccagccaga gcggcaaacc aggcgaaggg ggaaagcgtt
    30001 ttgggatcaa cgaggcgttg ccagctatag acaaaatcct gggcggtcac cggcgttcca
    30061 tcggcccatt gcgcatcatc ccgcaacgta aacgtccaga tacgattatc attgctcttc
    30121 cactggctgg cgacgccagg gataatttca cccttttcgt tctggttaac cagcccttca
    30181 aacagatcgc ggatcacctg aatttcaggc agcccaacgg ctttcgctgg atctaacgaa
    30241 gcgggctcat ctttgatatg acgcaccagt tcttgtttct ctgccagtac cgttccgccg
    30301 ggaacatccg cagcatatgc cagggaaaag ctgctaacca acagcgcaca acaggttact
    30361 gaaacagaat gcctcataga agttcctcaa agatgagtta aatgacaacg taattatttg
    30421 tttcagcaga aagaaatgca attatcttcc gccagaaagt tgatatcgcg ccatacaaga
    30481 gggtaaatag aaaccatttg ataatcggcg ggttttacac aacactacga tgattaccct
    30541 actggtctca gcttcgggaa acgcgtatga ctgtcacccg cccccgtgcc gagcgcggcg
    30601 catttccgcc aggcactgaa cattatggac gttcgctact aggcgcgccg ctaatctggt
    30661 ttccggcgcc tgccgtcaat cgcgaaagcg gcctgatact ggctggcacc cacggggatg
    30721 aaacctcatc cgtggtgacg ctctcctgtg cgttacgcac cttaaatccg tcccttcgcc
    30781 gtcatcatgt cgtacttgcc gttaatcctg atggctgtca actggggtta agggcaaatg
    30841 cgaatggcat tgatctaaac cgtaactttc ccgccgccaa ctggaaagcg ggtgagacag
    30901 tttatcgctg gaatagccgc gcgcaagagc gtgatgtcgt gctgctaacc ggcgaccatc
    30961 ccggctcaga accggaaacc caggcgcttt gccagttaat tcatcgactc caacccgcct
    31021 gggtcgtctc ttttcacgat ccgctagcct gcattgaaga tccacgtcgc agcgagctag
    31081 gcgagtggct ggccgatgcg tttgcgttgc cgctggtgac cagcgtaggt tacgaaacgc
    31141 ccggttcgtt tggcagctgg tgcgccgacc tcaacctgca ctgcattacc gccgagtttc
    31201 cccctgtttc cgccgatgaa gccagcgaaa aatacttgct ggcgatgtcg aatctgctcc
    31261 gctggcatcc taaagatgga gttgacccgt cgtaaagcgt agcgcaggct caacatcaac
    31321 cgccagccat gttgggccat caagatcggc gaagctcacc tgcggcataa gcggcagcgc
    31381 ggcgctaatc gctcttgatg tacagagcat acagcccagc atcaggccga atccttgctc
    31441 ccgcgcctcc gttgccagcg ccagcgcctc agtcagaccg ccggttttat ccagcttaat
    31501 gttgatcata tcgtagcgcc ccgtcagggc tttcagacta ctgcgagtat ggcagctctc
    31561 atctgcacag atgggcaacg gatgaataaa attttccagg gcggcgtcat cctgcgcggg
    31621 cagcggttgc tccagcatcg cgacattcag atccgccagt aactggcaac gcgccgccag
    31681 cc
//
LOCUS       DAGWFR010000026        31426 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.026, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000026 DAGWFR010000000
VERSION     DAGWFR010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 31426)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 31426)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..31426
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.026"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..1095)
                     /locus_tag="MOX77_001338"
     CDS             complement(<1..1095)
                     /locus_tag="MOX77_001338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-cystine transporter"
                     /protein_id="HCA3356917.1"
                     /translation="MNFPLIANIAVFVILLFVLAQARHKQWSLAKKVLVGLVMGVVFG
                     LALHTIYGADSQVLKDSIQWFNIVGNGYVQLLQMIVMPLVFASILSAVARLHNASQLG
                     KISFLTIGTLLFTTFIAALVGVLVTNLFGLTAEGLVQGGAETARLNAIETSYVGKVAD
                     LSVPQLVLSFVPKNPFADLTGANPTSIISVVIFAAFLGVAALKLLKDDAPKGERVLVA
                     IDTLQSWVMKLVRLVMQLTPYGVLALMTKVVAGSNLQDIIKLGSFVVASYLGLAIMFV
                     VHGILLGVNGISPLKYFRKVWPVLTFAFTSRSSAASIPLNVEAQTRRLGVPESIASFA
                     ASFGATIGQNGCAGLYPAMLAVMVAPTVGIN"
     gene            complement(1232..1831)
                     /locus_tag="MOX77_001339"
     CDS             complement(1232..1831)
                     /locus_tag="MOX77_001339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460287.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HCA3356918.1"
                     /translation="MGFIMTAEGHLLFSIASAVFAKNAELTPALAHGDWWHIIPSAIL
                     TCLLPDIDHPKSFLGQRLKWVSKPIARAFGHRGFTHSLLAVFALLATFYLKVPDTWII
                     PADALQGMVLGYLSHIVADMLTPAGVPLLWPCRWRFRLPILAPRKGNQLERFLCMALF
                     AWAVWMPQSMPENNVIRWSSQMITILQMQFNRFINHQID"
     gene            complement(1969..2637)
                     /gene="hxpB"
                     /locus_tag="MOX77_001340"
     CDS             complement(1969..2637)
                     /gene="hxpB"
                     /locus_tag="MOX77_001340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hexitol phosphatase HxpB"
                     /protein_id="HCA3356919.1"
                     /translation="MSTPRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDITRRH
                     ELPDTLRLRIDMVVDLWFAQQPWNGPDRQEVTNRVIARAITLIEETRPLLPGVREAVA
                     LCKAQGLLVGLASASPLHMLEKVLTMFELRDSFDALASAEKLPYSKPHPQVYLDCAAK
                     LGVDPLTCVALEDSVNGLIAAKAARMRAIVVPAEENQHDPRFALANVKLNSLTELTAA
                     HLLG"
     gene            2786..3322
                     /locus_tag="MOX77_001341"
     CDS             2786..3322
                     /locus_tag="MOX77_001341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YniB family protein"
                     /protein_id="HCA3356920.1"
                     /translation="MTYQQAGRIAILKRVVGWVIFIPALLSTLISVLKFMYAHSEKQE
                     GINAVMLDFTHVMIDMMRVNTPFLNVFWYNSPTPNFQGSLNIGFWLIFILIFVGLAMQ
                     DSGARMSRQSRFLREGVEDQLILEKAKGAEGLTREQIESRIVVPHHTIFLQFFPLYIL
                     PVIIIVLGYFFFSLLGFM"
     gene            complement(3365..4225)
                     /locus_tag="MOX77_001342"
     CDS             complement(3365..4225)
                     /locus_tag="MOX77_001342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructosamine kinase family protein"
                     /protein_id="HCA3356921.1"
                     /translation="MWQAISRLLSEQVGEGEIELRNELPGGEVHAAWHLRYAGHDFFV
                     KCDEREMLRGFTAEADQLELLSRSKTVVVPKVWAVGSDRDYSFLVMDYLSPRPLDAHN
                     AFILGQQLARLHQWSDQPQFGLDFDNALSTTPQPNTWQRRWSTFFAEQRIGWQLELAA
                     EKGITFGNIDAIVEHVQQRLASHQPQPSLLHGDLWSANCALGPDGPYIFDPACYWGDR
                     ECDLAMLPLHTDQPPQIYDGYQSVSPLPLDFLDRQPIYQLYTLLNRARLFGGQHLATA
                     QKAMDRLLAV"
     gene            complement(4332..4622)
                     /gene="ghoS"
                     /locus_tag="MOX77_001343"
     CDS             complement(4332..4622)
                     /gene="ghoS"
                     /locus_tag="MOX77_001343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type V toxin-antitoxin system endoribonuclease
                     antitoxin GhoS"
                     /protein_id="HCA3356922.1"
                     /translation="MASGDITRYVITVTFHEDSLTEINELNNHLTRSGFLLTLTDDEG
                     NVHELGTNTFGFVSAQSADEIKALVAGLAKSALDKDVDITVATWEAWSKNAQ"
     gene            complement(4719..5651)
                     /gene="pfkB"
                     /locus_tag="MOX77_001344"
     CDS             complement(4719..5651)
                     /gene="pfkB"
                     /locus_tag="MOX77_001344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphofructokinase II"
                     /protein_id="HCA3356923.1"
                     /translation="MVRIYTLTLAPSLDSATITPQIYPEGKLRCSAPVFEPGGGGINV
                     ARAIAHLGGTATAIFPAGGATGEHLVALLADENVPVSTVDAKDWTRQNLHVHVESSGE
                     QYRFVMPGATLDDDEFRQLEEQVLEIESGAILVISGSLPPGVKVEKLTQLISAAQKQG
                     IRCIIDSSGDALTAALALGDIELVKPNLKELSALVNRDLTQPDDVRKAAQELVQSGKA
                     RRVVVSLGPQGALGIDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAQDASLEEMV
                     RFGVAAGSAATLNQGTRLCSHDDTQKIYAYLSAQ"
     gene            5940..6698
                     /locus_tag="MOX77_001345"
     CDS             5940..6698
                     /locus_tag="MOX77_001345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdiY family protein"
                     /protein_id="HCA3356924.1"
                     /translation="MKLLKAVPAVVMLAGGVFASLYAAADDSVFTVMDDPSTAKKPFE
                     GNLNAGYLAQSGNTKSSSLTADTAMTWYGQRTAWSLWGNASNTSSNDERSSEKYAVGV
                     RNRFNMTDYDYTFGQASWLTDRFNGYRQRDVLTAGYGRQFLNGPVHSFRFEFGPGVRY
                     DEHTDDTTETQPLGYASGSYAWQLTDNAKFTQGVSVFGAEDTTLNSETALNVAINEHF
                     GLKVGYNLTWNSQPPESAPEHTDRRTTVTLGYKM"
     gene            complement(6747..7706)
                     /locus_tag="MOX77_001346"
     CDS             complement(6747..7706)
                     /locus_tag="MOX77_001346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A deacylase LpxR family protein"
                     /protein_id="HCA3356925.1"
                     /translation="MNKYSYCATMIAAILSTTTMANASSLAISVANDDAGIFQPSLNA
                     LYGHKAADRGDYTAGLFLGYSHDLTDASQLSFHIAQDIYSPSGANKRKPEAVKGDRAF
                     SAFLHTGLEWNSLATNWLRYRLGTDIGVIGPDAGGQEVQNRAHRIIGAEKYPAWQDQI
                     ENRYGYTAKGMVSLTPAIDILGVNVGFYPEVSAVGGNLFQYLGYGATVALGNDKTFNS
                     DNGFGLLSRRGLIHTQKEGLIYKVFAGVERREVDKNYTLQGKTLQTKMETVDINKTVD
                     EYRVGATIGYSPVAFSLSLNKVTSEFRTGDDYSYINGDITFFF"
     gene            7849..8163
                     /locus_tag="MOX77_001347"
     CDS             7849..8163
                     /locus_tag="MOX77_001347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356926.1"
                     /translation="MLKNGVKKHAPDIIEYPFFIRYLSARNYWLHDYAYNTMFFGINM
                     NIMLYSFELIFFDGFDVYLLLIFTVIVLSLMMSASNGWQGNITKLLPSELLGQLLLRK
                     KK"
     gene            8160..9015
                     /locus_tag="MOX77_001348"
                     /pseudo
     CDS             8160..9015
                     /locus_tag="MOX77_001348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460296.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA non-specific endonuclease"
     gene            9188..9394
                     /locus_tag="MOX77_001349"
     CDS             9188..9394
                     /locus_tag="MOX77_001349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_447756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3356927.1"
                     /translation="MDTQLTVNKFIFSLYVILRNKYNPLFTSILVRLNLFHQFRVITG
                     NSGYICFIPFYIDPFRAVRCTYLI"
     gene            complement(9717..10940)
                     /locus_tag="MOX77_001350"
     CDS             complement(9717..10940)
                     /locus_tag="MOX77_001350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen polymerase"
                     /protein_id="HCA3356928.1"
                     /translation="MLIISYIALCLLFIVYLYTLSVRIEGKIINVMVPYLIITVPTLY
                     VFEGIFVYLSEVQNYTVEYLFFYTCYITYIASFVISYLYTQRKPIYNKSNTKNKPRYV
                     FTSLLFTFLAFIIYLPVLMEFREYILSPRRIYELTRTGYGIYFYPSLMFSLVASICAF
                     FTYKKSKLFCISIVLFNCILIFLHGNKGPIFSIFIAFILYLSYIENKKIKFMFLVKSF
                     AVIAVIVTAFFAYTFTDGNPIENMANYSDYTRNAVLVASSNFDFMYGKLLMESEVYSR
                     IPRAIWPDKPEDFGALYLAKVFFPDAFYRNQGAPAFGYGELYADFGLFTPVWLVISGV
                     FKGVLAKYFSNKTQETKSAHYFIMFLFCIGISVIPVSMGWLFPEHLMIAFMVYIASSF
                     VFSEHIRFVLLRNNK"
     gene            11832..13760
                     /gene="thrS"
                     /locus_tag="MOX77_001351"
     CDS             11832..13760
                     /gene="thrS"
                     /locus_tag="MOX77_001351"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006894721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HCA3356929.1"
                     /translation="MPVITLPDGSQRHYDHPVSPMDVALDIGPGLAKATIAGRVNGEL
                     VDASDLIENDATLSIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVVDNGF
                     YYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFVKRGESYKVSIL
                     DENIAHDDKPGLYHHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRI
                     YGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRE
                     LEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNC
                     PGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQ
                     IRDEVNACIRMVYDMYSTFGFEKIVVKLSTRPDKRIGSDEMWDRAEADLAVALEENNI
                     PFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPV
                     MIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVVMNITDSQSEYVNELTQKLQNAG
                     IRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVNDV
                     IEKLQQEIRSRSLQQLEE"
     gene            13764..14306
                     /gene="infC"
                     /locus_tag="MOX77_001352"
     CDS             13764..14306
                     /gene="infC"
                     /locus_tag="MOX77_001352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HCA3356930.1"
                     /translation="MKGGKRVQTARPNRINSEIRAQEVRLTGLEGEQLGIVSLREALE
                     KAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT
                     DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKNDLQELAVVES
                     FPTKIEGRQMIMVLAPKKKQ"
     gene            14402..14599
                     /gene="rpmI"
                     /locus_tag="MOX77_001353"
     CDS             14402..14599
                     /gene="rpmI"
                     /locus_tag="MOX77_001353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006708231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HCA3356931.1"
                     /translation="MPKIKTVRGAAKRFKKTGKGGFKHKHANLRHILTKKATKRKRHL
                     RPKAMVSKGDLGLVIACLPYA"
     gene            14650..15006
                     /gene="rplT"
                     /locus_tag="MOX77_001354"
     CDS             14650..15006
                     /gene="rplT"
                     /locus_tag="MOX77_001354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HCA3356932.1"
                     /translation="MARVKRGVIARARHKKILKQAKGYYGARSRVYRVAFQAVIKAGQ
                     YAYRDRRQRKRQFRQLWIARINAAARQNGISYSKFINGLKKASVEIDRKILADIAVFD
                     KVAFTALVEKAKAALA"
     misc_feature    15122..15245
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01859"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Phe leader region; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF01859"
     gene            15127..15171
                     /gene="pheM"
                     /locus_tag="MOX77_001355"
     CDS             15127..15171
                     /gene="pheM"
                     /locus_tag="MOX77_001355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pheST operon leader peptide PheM"
                     /protein_id="HCA3356933.1"
                     /translation="MNAAIFRFFFYFST"
     gene            15308..16291
                     /gene="pheS"
                     /locus_tag="MOX77_001356"
     CDS             15308..16291
                     /gene="pheS"
                     /locus_tag="MOX77_001356"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004851795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HCA3356934.1"
                     /translation="MSHLAELVANAAAAINQASDVAALDNVRVEYLGKKGHLTLQMTT
                     LRDLPPEERPAAGAVINAAKEQVQQALNARKAELESAALNARLAAETIDISLPGRRIE
                     NGGLHPVTRTIDRIESFFGELGFTVATGPEIEDDYHNFDALNIPGHHPARADHDTFWF
                     DATRLLRTQTSGVQIRTMKAQQPPIRIIAPGRVYRNDYDQTHTPMFHQMEGLIVDTNI
                     SFTNLKGTLHDFLRNFFEEDLQIRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGMVH
                     PNVLRNVGIDPEIYSGFAFGMGMERLTMLRYGVTDLRSFFENDLRFLKQFK"
     gene            16307..18694
                     /gene="pheT"
                     /locus_tag="MOX77_001357"
     CDS             16307..18694
                     /gene="pheT"
                     /locus_tag="MOX77_001357"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HCA3356935.1"
                     /translation="MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFNG
                     VVVGEVVECAQHPNADKLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATIGAILPGD
                     FKIKAAKLRGEPSEGMLCSFSELGISDDHSGIIELPADAPLGTDIREYLKLDDNTIEI
                     SVTPNRADCLGIIGVARDVAVLNKAPLQEPEMAPVTATISDTLLITVEAVDACPRYLG
                     RVVKGINVNAPTPLWMKEKLRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIDGGI
                     VVRMAKEGETVVLLDGSEATLNADTLVIADHHKALGIAGIFGGEHSGVNGETQNVLLE
                     CAYFNPLSITGRARRHGLHTDASHRYERGVDPALQYKTIERATRLLLDICGGDAGPII
                     DVSNEATLPKRATITLRRSKLDRLIGHHIADEQVSDILRRLGCEVTEGQDEWKAVAPT
                     WRFDMEIEEDLVEEVARVYGYNNIPDEPIQAGLIMGTHREADLSLKRVKTMLNDKGYQ
                     EVITYSFVDPKVQQLIHPGAEALLLPNPISVEMSAMRLSLWSGLLATVVYNQNRQQNR
                     VRIFETGLRFVPDTQANLGIRQDLMLAGVICGNRYDEHWNLAKETVDFYDLKGDLEAV
                     LDLTGKLGDIQFKAEMNPALHPGQSAAIYLKDERIGFIGVVHPELERKLDLNGRTLVF
                     ELEWNKLADRIVPQAREISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNL
                     FDVYRGKGVAEGYKSLAISLILQDTNRTLEEEEIAATVAKCVEALKERFQASLRD"
     gene            18699..18998
                     /gene="ihfA"
                     /locus_tag="MOX77_001358"
     CDS             18699..18998
                     /gene="ihfA"
                     /locus_tag="MOX77_001358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit alpha"
                     /protein_id="HCA3356936.1"
                     /translation="MALTKAEMSEYLFDKLGLSKRDAKELVELFFEEIRRALENGEQV
                     KLSGFGNFDLRDKNQRPGRNPKTGEDIPITARRVVTFRPGQKLKSRVENASPKEE"
     gene            19201..20181
                     /gene="btuC"
                     /locus_tag="MOX77_001359"
     CDS             19201..20181
                     /gene="btuC"
                     /locus_tag="MOX77_001359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin B12 ABC transporter permease BtuC"
                     /protein_id="HCA3356937.1"
                     /translation="MLTFARQQQRRNVRWLLSLSLLVLLATLLSLCAGEQWIAPGDWL
                     SARGELFVWQIRLPRTLAVLLVGAALALSGAVMQALFENPLAEPGLLGVSNGAGVGLI
                     AAVLLGQGQLPGWALGLCAIAGALIITLILLRFARRHLSTSRLLLAGVALGIICSALM
                     TWAIYFSTSFDLRQLMYWMMGGFGGVDWQQSWLMIALIPVLIWICCQSQPLNMLALGE
                     TSARQLGLPLWLWRNLLVIATGWMVGVSVAMAGAIGFIGLVIPHILRLCGLTDHRVLL
                     PGCALAGAIALLLADVVARLALASAELPIGVVTATLGAPVFIWLLLKSAR"
     gene            20273..20824
                     /locus_tag="MOX77_001360"
     CDS             20273..20824
                     /locus_tag="MOX77_001360"
                     /EC_number="1.11.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione peroxidase"
                     /protein_id="HCA3356938.1"
                     /translation="MQNSLLNTHVTTIDGEVTTLEKYAGKVLLIVNVASRCGLTPQYE
                     QLENIQKAWADQGFVVLGFPCNQFMGQEPGSEEEIKTYCASTWGVTFPMFSKIDVNGD
                     ARHPLYQKLIAAAPTAVAPEKSGFYERMVSKGRTPLYPDDILWNFEKFLVGRDGQVVQ
                     RFSPDMTPEDPIVMESIKIALAK"
     gene            20824..21573
                     /gene="btuD"
                     /locus_tag="MOX77_001361"
     CDS             20824..21573
                     /gene="btuD"
                     /locus_tag="MOX77_001361"
                     /EC_number="7.6.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin B12 ABC transporter ATP-binding protein
                     BtuD"
                     /protein_id="HCA3356939.1"
                     /translation="MSQLMQLKDVAESTRLGPLSGEVSAGEILHLVGPNGAGKSTLLA
                     RMAGLTSGEGSIRFGGAPLEAWATATLAQHRAYLAQQQNPPFAMPVWHYLTLHQPDKT
                     RTGQLNEVADMLGLGDKLGRSVNQLSGGEWQRVRLAAVVLQIHPDANPVGQLLLLDEP
                     MNSLDVAQQNALDRVLHHLCQAGIAIVMSSHDLNHTLRHAHKAWLLKRGKLIACGRRE
                     EVLTPSYLAQAYGLRFRRLDVEGHPMLISAT"
     gene            21650..22114
                     /locus_tag="MOX77_001362"
     CDS             21650..22114
                     /locus_tag="MOX77_001362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HCA3356940.1"
                     /translation="MRFWLLVITALFLAGCSTHRAPAPNARLSDSITVIAGLNDQLQS
                     WRGTPYRYGSMSRRGVDCSGFVVVTMRDKFDLQLPRDTREQSKIGTRIDKDELLPGDL
                     VFFKTGSGESGLHVGIYDTNNEFIHASTSRGVMRSSLDNVYWRKNFWQARRI"
     gene            22428..23141
                     /gene="ydiV"
                     /locus_tag="MOX77_001363"
     CDS             22428..23141
                     /gene="ydiV"
                     /locus_tag="MOX77_001363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-FlhDC factor YdiV"
                     /protein_id="HCA3356941.1"
                     /translation="MIASLDELYHSELFFLPVMDENARLVGLEIIATFAAEDGAVRMP
                     TELVAPRLSVEEQYCLFVEKLALLETCQHFFIQHKLIAWLNLPPAISDLLLLDSELFS
                     RAARFPFFEVAINENYPGLNQGKNNETLANLAMHFPLILANFGAGEASTKAIFDGLFK
                     RVMLDKNFIQQRAEMISFEPFMHAIVAQISSSCESLMIAGIDTEAMFARAAPLGFSAF
                     QGGLWPPVPVSQLIKLVQR"
     gene            23203..24645
                     /locus_tag="MOX77_001364"
     CDS             23203..24645
                     /locus_tag="MOX77_001364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdiU family protein"
                     /protein_id="HCA3356942.1"
                     /translation="MTLSFTARWRDELPATYTALLPTPLKNARLIWYNDELAQQLAIP
                     ASLFDATNGAGVWGGETLLPGMSPVAQVYSGHQFGIWAGQLGDGRGILLGEQLLADGS
                     TLDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVASDTPVQ
                     RETQETGAMLMRLAQSHMRFGHFEHFYYRREPEKVQQLADFAIRHYWPQWQDVAEKYA
                     LWFEEVAARTGRLIAEWQTVGFSHGVMNTDNMSILGLTIDYGPFGFLDDYDPGFIGNH
                     SDHQGRYRFDNQPSVALWNLQRLAQTLTPFIEIDALNRALDRYQDALLTHYGQRMRQK
                     LGFFTEQKDDNALLNELFSLMAREGSDYTRTFRMLSHTEQQSASSPLRDTFIDRAAFD
                     AWFDRYRARLRTEAVDDALRQQQMQRVNPAIVLRNWLAQRAIDAAEQGDMAELHRLHE
                     VLRQPFTDRDDDYASRPPEWGKRLEVSCSS"
     gene            complement(24681..24872)
                     /gene="hemP"
                     /locus_tag="MOX77_001365"
     CDS             complement(24681..24872)
                     /gene="hemP"
                     /locus_tag="MOX77_001365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemin uptake protein HemP"
                     /protein_id="HCA3356943.1"
                     /translation="MSRMDNTELPHPKEIDNETLLPAAERRVNSQALLGPDGKVIIDH
                     NGQEYLLRKTQAGKLLLTK"
     gene            complement(25029..26075)
                     /gene="aroH"
                     /locus_tag="MOX77_001366"
     CDS             complement(25029..26075)
                     /gene="aroH"
                     /locus_tag="MOX77_001366"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroH"
                     /protein_id="HCA3356944.1"
                     /translation="MNRTDELRTARIDSLVTPTELAQRYPVSSSVASHVTDSRRRIEK
                     ILNGEDPRLLVVIGPCSIHDLNAAMEYATQLQAQRQKHQARLEIVMRTYFEKPRTVVG
                     WKGLISDPDLNGSYRVNHGLELARRLLLQVNELGVPTATEFLDMVTGQFIADLISWGT
                     IGARTTESQIHREMASALSCPVGFKNGTDGNTRIAVDAIRASRASHMFLSPDKDGQMT
                     IYQTSGNPYGHIIMRGGKKPNYHAEDIAAACDTLHEFDLPEHLVVDFSHGNCQKQHRR
                     QLDVCDDICQQIRNGSTAIAGIMAESFLREGTQKIISGQPLIYGQSITDPCLNWEDTE
                     VLLEKLAAAVDSRF"
     gene            complement(26231..27064)
                     /gene="ppsR"
                     /locus_tag="MOX77_001367"
     CDS             complement(26231..27064)
                     /gene="ppsR"
                     /locus_tag="MOX77_001367"
                     /EC_number="2.7.11.33"
                     /EC_number="2.7.4.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="posphoenolpyruvate synthetase regulatory
                     kinase/phosphorylase PpsR"
                     /protein_id="HCA3356945.1"
                     /translation="MDNVVDRHVFYISDGTAITAEVLGHAVMSQFPVTISSITLPFVE
                     NESRARAVKDQIDAIYQQTGVRPLVFYSIVLPEIRAIILQSEGFCQDIVQALVAPLQQ
                     EMKLDPTPIAHRTHGLNPGNLNKYDARIAAIDYTLAHDDGISLRNLDQAQVILLGVSR
                     CGKTPTSLYLAMQFGIRAANYPFIADDMDNLTLPTSLKPLQHKLFGLTIDPERLAAIR
                     EERRENSRYASLRQCRMEVAEVEALYRKNQIPCLNSTNYSVEEIATKILDIMGLNRRM
                     Y"
     gene            27401..29779
                     /gene="ppsA"
                     /locus_tag="MOX77_001368"
     CDS             27401..29779
                     /gene="ppsA"
                     /locus_tag="MOX77_001368"
                     /EC_number="2.7.9.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate synthase"
                     /protein_id="HCA3356946.1"
                     /translation="MSNNGSSPLVLWYNQLGMNDVDRVGGKNASLGEMITNLSGMGVS
                     VPNGFATTADAFNQFLDQSGVNQRIYELLDKTDIDDVSQLAKAGAQIRQWIIDTPFQP
                     ALENAIRDAYAQLSSDDENASFAVRSSATAEDMPDASFAGQQETFLNVQGFDAVLVAV
                     KHVFASLFNDRAISYRVHQGYDHRGVALSAGVQRMVRSDLASSGVMFSIDTESGFDQV
                     VFITSAWGLGEMVVQGAVNPDEFYVHKPTLAAGRPAIVRRTMGSKKIRMVYAATQEHG
                     KQVKIEDVPQEQRDIFSLTNEEVQELAKQAVQIEQHYGRPMDIEWAKDGHTGKLFIVQ
                     ARPETVRSRGQVMERYTLHAQGKIIAEGRAIGHRIGAGTVKVIHDIGEMNRIEPGDVL
                     VTDMTDPDWEPIMKKAAAIVTNRGGRTCHAAIIARELGIPAVVGCGDATERMKDGEKV
                     TVSCAEGDTGYVYADMLDFSVKSSSVDTMPELPLKVMMNVGNPDRAFDFACLPNEGVG
                     LARLEFIINRMIGVHPRALLEFDDQDAALQNDIREMMKGFDSPREFYVGRLTEGIATL
                     GAAFYPKRIIVRLSDFKSNEYANLVGGERYEPHEENPMLGFRGAGRYVAESFRDCFAL
                     ECEAVKRVRNDMGLTNVEIMIPFVRTVDQAKAVIEELARQGLKRGENGLKIIMMCEIP
                     SNALLAEQFLEYFDGFSIGSNDMTQLALGLDRDSGVVSELFDERNDAVKALLSMAIRA
                     AKKQGKYVGICGQGPSDHEDFAAWLMEEGIDSLSLNPDTVVQTWLSLAELKK"
     gene            complement(29879..30637)
                     /gene="aroD"
                     /locus_tag="MOX77_001369"
     CDS             complement(29879..30637)
                     /gene="aroD"
                     /locus_tag="MOX77_001369"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I 3-dehydroquinate dehydratase"
                     /protein_id="HCA3356947.1"
                     /translation="MKTVTVKNLIIGEGMPKIIVSLMGRDINSVKAEALAYREATFDI
                     LEWRVDHFMDIASTQSVLTAARVIRDAMPDIPLLFTFRSAKEGGEQTITTQHYLTLNR
                     AAIDSGLVDMIDLELFTGDADVKATVDYAHAHNVYVVMSNHDFHQTPSAEEMVLRLRK
                     MQALGADIPKIAVMPQSKHDVLTLLTATLEMQQHYADRPVITMSMAKEGVISRLAGEV
                     FGSAATFGAVKQASAPGQIAVNDLRSVLMILHNA"
     gene            complement(30700..30807)
                     /gene="rprA"
                     /locus_tag="MOX77_001370"
     ncRNA           complement(30700..30807)
                     /ncRNA_class="antisense_RNA"
                     /gene="rprA"
                     /locus_tag="MOX77_001370"
                     /product="antisense sRNA RprA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00034"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00034"
     gene            complement(30990..>31426)
                     /locus_tag="MOX77_001371"
     CDS             complement(30990..>31426)
                     /locus_tag="MOX77_001371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HCA3356948.1"
                     /translation="GGVGLAISGVPYATLLTVVMILSCLVQLGPLPVLIPAIIWLYWT
                     GDTTWGTVLLVWSAVVGTLDNVIRPVLIRMGADLPLLLILSGVIGGLIAFGMIGLFIG
                     PVLLAVTWRLFSAWVHEVPAPTNEPEEILEELDDIEEANKQS"
BASE COUNT         7982 a         7514 c         8179 g         7751 t
ORIGIN      
        1 gttgatgccg accgtcggcg caaccattac cgctaacatc gcaggataaa gaccggcaca
       61 accgttttgg ccgatggtcg cgccaaaaga ggcagcaaag ctggcgatgg actccggcac
      121 gcccagacgg cgggtttgcg cttcgacatt aagtggaatg gaggcggcgc tggagcggct
      181 ggtaaaggca aatgtcagca ccggccacac cttgcggaaa tatttcagcg ggctaatccc
      241 gttcacgccc aatagtatgc cgtgaaccac aaacattatc gccagaccaa gatatgacgc
      301 taccacgaag cttccaagct taatgatgtc ctgcaaatta gagccggcaa ccactttcgt
      361 catcagcgcc agtacgccgt aaggcgtaag ttgcatcacc agacgcacca gcttcatcac
      421 ccagctttgc agggtatcga tagcaacaag cacacgctcg ccttttggcg catcatcttt
      481 cagcagttta agcgcggcca cgcccaggaa tgcggcgaaa atcaccacgc tgataataga
      541 cgtaggattt gcgccagtca gatccgcaaa cggatttttc ggtacaaaag acagcaccag
      601 ttgcggcacg ctgagatcgg ccactttgcc gacatagctc gtctcaatgg cattcagacg
      661 cgcggtttcc gcgccgccct gaaccagacc ttccgccgtc agtccgaaca gattggtgac
      721 cagcacgccc accagcgctg cgataaaggt agtaaacagc agcgtgccga tagtcagaaa
      781 actgattttc cccaattgag aggcgttatg cagtcgtgcc acggcgctta aaatagaggc
      841 gaataccagc ggcatcacaa tcatttgtag caattgcaca taaccgttgc cgacaatatt
      901 gaaccactga atggagtctt ttaacacctg actgtcagcg ccataaatgg tgtgcagggc
      961 cagaccaaag accacgccca tcacaaggcc gacaagcact tttttagcca gactccactg
     1021 tttatgacgg gcctgcgcca gtacaaacag cagaatgacg aacaccgcaa tgttcgcaat
     1081 taatggaaaa ttcatccccg ttctcctgat ttttttatta tgaagcgctg tgttttagcg
     1141 attctgttcg cgcaagatta gcagaactgt gagctggctc ttatattcaa atggaatggt
     1201 ttatacctaa aatgactttg gcgttgattt actaatcaat ctggtgattt ataaaacgat
     1261 tgaactgcat ttgcaggata gtgatcatct gcgaagacca gcgtatgacg ttgttttccg
     1321 gcatggattg cggcatccac accgcccagg caaacaacgc catacataaa aatcgctcca
     1381 gttgattgcc cttgcgcggc gccagaatag gcaggcggaa acgccagcga cacggccaca
     1441 gtaagggaac gcctgcgggg gtaagcatat ccgcgacgat atggcttaaa tagccgagta
     1501 ccatgccttg cagcgcatcc gccgggataa tccacgtatc cggaaccttg agataaaagg
     1561 tcgccagtag ggcaaagacc gccagcagac tatgggtaaa cccccggtga ccgaatgcgc
     1621 gggcgatcgg tttcgatacc catttcaggc gctgaccaag aaaagatttg gggtgatcga
     1681 tatccggcag cagacaggtc aaaatagccg aaggaataat atgccaccag tcgccgtgcg
     1741 caagggcggg cgttaactcg gcattcttgg cgaaaaccgc gctggctata gaaaaaagaa
     1801 gatgtccttc cgccgtcatg ataaaaccca ttaaactgtc aattcataca gtatagggtt
     1861 tttatacagt aggcggaagt ggtgacgttg taactctttg tctctgtcaa agccgcttgc
     1921 cgtctggctc agcggctaat tgcccgttga ctttgtttcg gaaacatctt aaccgagtag
     1981 atgcgccgcc gtcagctctg tcagtgagtt aagtttgaca ttcgccagcg caaagcgcgg
     2041 atcatgctgg ttttcttctg ctggcaccac aatggcgcgc attcgcgccg cctttgccgc
     2101 gattaaacca ttcaccgaat cctccagcgc cacgcaggtt aatggatcaa cgcctaattt
     2161 ggccgcacaa tccagataga cctgcgggtg cggtttgctg tagggcaatt tttccgcaga
     2221 ggccagcgcg tcaaaactgt cgcgcagttc aaacatggtg agcacttttt ccagcatatg
     2281 cagcggcgat gccgaggcaa gccccactaa tagcccctgc gctttacaca gcgccacagc
     2341 ttcgcgcaca cccggcaaaa gagggcgcgt ctcttcgata agcgtaatcg cgcgggcaat
     2401 aacacggttt gtcacttcct ggcgatcggg gccgttccac ggttgctgcg caaaccagag
     2461 atcgacaacc atatcaatgc gtagcctaag cgtgtctggc agttcatggc gccgagtaat
     2521 atctacgcct aaacttgcca tcacgtccag ttcagcgcga tcccagagcg gttcggaatc
     2581 gatcaatagt ccatccatat cgaaaattgc agcaagaatt tgacgtgggg ttgacatcac
     2641 aacctctcct gttgagatta aaaaataacg aattaagcgt tcattatgac catgttctta
     2701 gtatatcgcc cttaaagatc aggcgaaaac gggaatcaac aggtagactt aggccaaaac
     2761 gacgcgtctt tatcaagggg aactcatgac gtatcaacaa gctggacgca ttgcaatcct
     2821 aaaaagagtt gttgggtggg ttatttttat tccggcactg ctttccacgc tcatctcagt
     2881 ccttaaattt atgtatgcgc acagtgaaaa gcaggagggg ataaatgcgg taatgctgga
     2941 ttttacccac gtaatgatag acatgatgcg cgtgaatacg ccgtttctga atgttttttg
     3001 gtacaactcg ccgacgccga attttcaggg aagcctgaat atcggtttct ggctcatttt
     3061 tattctgatt tttgtcgggc tggcgatgca ggattccggc gccagaatga gccgccagtc
     3121 acgtttttta cgtgaaggcg tggaagatca gttgatcctg gaaaaagcaa aaggcgcgga
     3181 aggactaacg cgtgagcaga tagagtcacg tatcgtggtg ccgcaccata ccatcttttt
     3241 acagtttttc ccgctctata ttttgccggt cattattatc gtgctcggct actttttctt
     3301 ttccttgtta ggtttcatgt aaactgaaaa atgccggata gcccgtatcc ggtgtgggct
     3361 gtacctatac cgcaagcagc cgatccatcg ctttttgcgc agtagccagg tgctgaccgc
     3421 caaacagcct tgcccgatta agcagggtgt agagctggta aatcggctgc ctgtcgagaa
     3481 aatccagcgg tagcggcgaa acggactgat agccgtcata aatctgcggt ggctgatcgg
     3541 tatgcagcgg cagcatcgcc agatcgcatt ctctgtcgcc ccaatagcag gctggatcga
     3601 agatataggg gccgtcaggg ccaagcgcgc agttcgccga ccatagatcg ccatgcaaaa
     3661 gagaaggctg cggttgatgc gacgccagac gttgctgaac atgttcaaca atggcgtcaa
     3721 tattaccaaa ggtaatgcct ttttccgcgg cgagttcaag ctgccagcca atgcgctgtt
     3781 cggcgaaaaa agtcgaccaa cggcgttgcc aggtattcgg ctgcggcgtg gtagagagcg
     3841 cgttatcaaa atcgaggccg aattgaggtt ggtcgctcca ttggtgcagg cgcgccagct
     3901 gttgcccaag aataaacgca ttatgggcat ccagcgggcg gggcgagagg tagtccatga
     3961 ctaaaaagct gtaatcccga tccgaaccta ccgcccatac cttaggcaca acaacggttt
     4021 tactgcggga gagcagctcc agctgatcgg cttcagcggt aaaaccgcga agcatttctc
     4081 gttcatcgca cttcacgaaa aaatcatggc cggcataacg taaatgccat gcggcatgaa
     4141 cttctccgcc tggcagttca ttacgcagtt cgatttcgcc ttcaccgact tgctcgctta
     4201 aaagacgact gatagcttgc cacataatgt ctctccccac gttgtctgcc agatcataag
     4261 gttagcgcaa aaatgcggtt aaaaaatacg aactaacgca catcgcggac gcgccgcggc
     4321 gggaatggca cttattgtgc gtttttactc cacgcctccc aggtcgccac ggtaatgtcg
     4381 acatccttat ctaacgcgct tttcgcaagt ccggcgacaa gcgctttgat ttcatcagcg
     4441 ctctgagcgc taacaaagcc aaacgtattg gtgccgagct catgcacatt cccttcatcg
     4501 tccgttaatg tcagcaaaaa accgctgcgc gtcagatggt tattgagttc gttaatctcg
     4561 gtcagggaat cttcatggaa ggttacggta ataacataac gggtaatatc gccactggcc
     4621 atcgttcacc tcgttgggag caactgtgtt tttaacagcg gcggatgcgc cgcccgttaa
     4681 ccgattttcc ggtatccccc tcggcgaggg ggaaacgatt attgcgcgga aagataggcg
     4741 tatatttttt gggtatcgtc atgagaacac agacgcgtac cttgattgag cgtagcggcg
     4801 ctgcctgccg ccacaccgaa gcgcaccatc tcttccagcg acgcgtcttg cgccagtttt
     4861 aacgtcatcg cgcccaccat actgtcgcct gcgccgacag tactttgact tttcaccggg
     4921 ggaggaacaa cctggatgca attctcactg tctatgccca gcgccccttg cggccccaga
     4981 gagaccacta cccggcgagc cttgccactt tgcactaatt cctgggccgc tttacgcaca
     5041 tcatcaggct gcgtcagatc gcgattgact aacgcgctca attctttcag gttaggtttc
     5101 accagttcga tatcgccaag cgccaacgca gcggtgagcg cgtcgccaga gctatcaata
     5161 atgcagcgaa tgccttgctt ctgcgcggcg gaaatcagtt gcgtgagttt ctcgacctta
     5221 acgccgggcg gaaggctgcc gctgataacc agaattgccc cggattcaat ttccagtacc
     5281 tgttcttcaa gctggcgaaa ttcgtcatcg tccagcgtgg cgccgggcat aacaaaacga
     5341 tattgttcgc cgctggactc gacgtggacg tgcaggttct gacgcgtcca gtccttcgca
     5401 tcgacggtag acacggggac attttcgtca gccagtagtg cgaccagatg ttcgccggta
     5461 gcgccgccag ccgggaaaat tgcggtcgcg gtgccgccaa gatgcgcaat ggcgcgagcg
     5521 acattaatac ccccgccgcc gggttcgaat accggcgcgg agcaccgcag tttaccttcg
     5581 ggataaattt gcggcgtgat tgttgcgcta tcgagagagg gcgcaagcgt caacgtatag
     5641 atacgtacca tcgttacctc ctgttaggct gatttcagtc tggcacttaa tccccggaaa
     5701 gtgaaggaat taacaatatg attttccgga tctttattta aagaagtacg atgtaaagtt
     5761 atataaataa atgaatgctt cgggagggtt cttattcaaa aaatgaaata gtaattgatt
     5821 gctatgttat tcggggcttc ttataattcg ctacctttcc aggggcgttt gtcattgatc
     5881 cctatgaaag tttccgggac cgtcgtggtc tcttttttag ttgtacggac tctatataaa
     5941 tgaagctttt gaaggcagta cccgctgtag ttatgctggc gggtggcgtg ttcgcgtctc
     6001 tgtatgccgc cgccgatgat tccgttttta ctgtcatgga tgatccctcc accgcgaaaa
     6061 aaccttttga aggtaatctg aatgcgggct accttgctca gtcaggcaat actaaaagtt
     6121 cttccttaac ggctgacacg gcgatgacct ggtatggaca acgtaccgcc tggtcattat
     6181 ggggcaatgc cagcaatacc tcctctaatg atgaacgctc ttcagaaaaa tatgcggtag
     6241 gcgtgcgtaa ccgttttaat atgacggatt atgattatac ctttggccag gccagttggc
     6301 tgacagaccg tttcaacggt tatcgtcagc gcgacgtact gaccgccggt tacgggcggc
     6361 agttccttaa tggtccagtg cacagcttcc gttttgaatt cggtccaggg gttcgctatg
     6421 acgaacatac ggacgatacc actgaaacgc agccgttggg ttatgcttcc ggcagctatg
     6481 cctggcagtt aactgacaat gctaagttta cacagggggt gtcagtattt ggcgcagaag
     6541 acaccacact aaattcggaa acagccctca atgtcgccat taacgaacat tttggtctaa
     6601 aggtggggta taatttaacg tggaactcgc agccgcctga atcagcgcct gaacataccg
     6661 atcgccgcac tacggtaacg ctgggctata agatgtaata ttgcgccggg ttacgttacg
     6721 taacccggtt attccgtggt gacgcctcag aagaagaagg tgatgtcgcc gttgatataa
     6781 gaatagtcgt ctccggtgcg aaattccgac gtgactttgt ttaaagaaag agaaaatgcg
     6841 acgggagaat agccgatggt ggcaccgacg cgatattcat ccacggtttt attaatatcc
     6901 accgtttcca tttttgtttg cagcgttttc ccctgtaacg tgtagttttt atcaacttcc
     6961 ctgcgctcaa cgccagcaaa tactttatag atcaatccct ctttttgagt gtgtattaac
     7021 cctcggcggg acaataaccc aaacccatta tcagagttga aggtcttatc atttcccagc
     7081 gcaacggttg cgccgtaccc caaatactgg aagagattgc cgccgacagc agagacttct
     7141 ggatagaagc ccacattgac acccagaata tcaatagctg gcgtaaggga gaccattcct
     7201 tttgccgtgt aaccataacg gttttcaatt tgatcctgcc aggcagggta tttttctgcg
     7261 cctattattc gatgcgcccg attctgaacc tcctgaccgc ctgcgtcagg accaataacg
     7321 ccgatatcgg tacctaaacg ataacgtaac caattggtgg ctaatgaatt ccactccagt
     7381 ccggtatgaa gaaaggcgct gaacgcgcgg tcgcctttga cggcttcagg ctttctttta
     7441 ttggcgccag atggagaata aatatcttgc gcgatatgaa aagagagttg actggcgtca
     7501 gtgagatcgt ggctgtagcc taaaaagagc ccggcagtat aatcaccccg gtctgcagcc
     7561 ttgtgcccgt aaagggcatt taaggatggt tgaaatatac ctgcatcatc attcgccact
     7621 gaaatagcaa ggctactggc attggccatt gtggtcgtac tgagtatggc ggcaatcatc
     7681 gttgcgcaat agctgtattt gttcactttt tacccctgaa tatgaaagtg aatactctta
     7741 tttttacaaa gtaataagca cagcagcatg atgcgcagtg cttattaaac ctttaaatat
     7801 aactaaactc ctgccagcag cgagtcattg agaggatacg ttgccttaat gttgaaaaat
     7861 ggtgttaaaa aacatgcgcc agatattatt gaatatccat ttttcattcg ctatctgagt
     7921 gcgagaaatt attggcttca cgattatgca tataatacga tgttttttgg tatcaacatg
     7981 aatatcatgt tgtattcttt tgagctcatt ttctttgatg gcttcgatgt ttatctgtta
     8041 ttaattttta ccgtgatagt gttgtcttta atgatgagcg catctaacgg ctggcagggt
     8101 aatataacca aattattgcc atctgaatta ttagggcagt tattattaag gaagaaaaaa
     8161 tgaataaaac cattaatctg ctaaaattac tgcccgtagt attattaagc gcatgtacta
     8221 catcgtatcc tccccaggat acaacatcgg cacccgagtt accccatcgt aacgtactcg
     8281 ttcagcaacc tgataactgt agcgttggct gtcctcaagg aggaagtcaa caaacaatct
     8341 atcgccatgt ctatacgctc aataataata gcgccacgaa atttgccaac tgggttgcct
     8401 atagcgtgac aaagaccagc caggcaagcg gtcgcccgcg gaactgggcg caggaccccg
     8461 atttaccgcc ctcggatacg ttggcccctt cggcctataa aaatgcccat acgctattaa
     8521 aagtcgacag gggacaccag gcgccgttgg caggattggg cggcgtttcg gactggccgt
     8581 cgttaaatta tttatcgaat attacgccgc agaaatccgc cctgaaccag ggagcatggg
     8641 ctgcactgga aaaccgggtg cgcgaacttg ccaaacaggc tgatgtatct gtagtgcacg
     8701 tagtgaccgg cccccctttt tgagcggcat atcgccacat tgccagaaga tgcgacggta
     8761 gaaattccca gcgggtacta gaaggtttta ttcaccggaa cggcgccgtc aaaaagtgaa
     8821 ggaaattacg ctgcgtttat tatggatcag aatacacccc gttcggcgaa tttttgcgac
     8881 tatcaggtta ccgtggaggc tatcgaacat aaaacgaagc cagtgctgac gctgtggtct
     8941 aacttgcctg aagcggtagc cagcgaggtg aaaacaacaa aggggagtct ggcgcagagg
     9001 ttaggttgcc gatgagaagc gctatacggc gcgtagaaag ataatggaga aaccctgtca
     9061 aggggcttga tttgctacag agtgatgcaa tccccctttt tttagtgtta ccatcatcat
     9121 gccggacgaa aatagcgatt ttcgtctgtg tcgaaggttg tgcgccaatt tagcaatggt
     9181 tggctagatg gatacacaac tcactgttaa taaattcatt ttctctttgt atgtgatctt
     9241 gcgtaataag tacaatcctt tattcacatc cattctcgtt cgtttaaacc tgtttcacca
     9301 gttccgcgtc attactggta atagcggata tatatgtttc ataccgtttt acattgatcc
     9361 ctttcgcgcc gtaagatgta cgtacctaat ctaacttaag cagggaactg tcattcataa
     9421 cacagagttt attggtatca atggtagatt atattacggt gacaatctcg ggatgatccg
     9481 catatgagta gatgtggatt agggcggagt agcggcagga ctaataataa ccggcggcga
     9541 gaaatacata attgaggggc tattcataaa tcatcatcta gaaacgcaag cactatcatg
     9601 aatatatcat aagtaattta cgttggtaat gatggctcag caaacccaac aagctttaca
     9661 ggaacaattt ttacgcttca gagccaaata aaacggcggc attgccgccg tataacttat
     9721 ttattgtttc ttagtaaaac gaatcttata tgctctgaaa aaacaaagga agatgcaatg
     9781 tataccataa aagcaatcat caaatgctca gggaacaacc atcccatgct aacaggaatc
     9841 acacttattc caatgcaaaa taggaacatt atgaaataat gcgctgactt tgtttcctga
     9901 gttttattgg agaaatactt agctaggacg cctttaaata ctccagatat aactaaccaa
     9961 actggtgtaa aaagcccgaa atctgcgtat agttcaccat acccgaaagc aggagcgccc
    10021 tgatttctgt agaatgcatc agggaaaaat acttttgcca gatacaatgc gccaaaatct
    10081 tcaggcttat caggccaaat agccctcgga atcctcgagt aaacctcgct ctccattagt
    10141 aattttccgt acataaagtc aaagtttgag gaagcaacaa gaacagcatt acgggtataa
    10201 tccgagtaat tagccatatt ttctatcgga ttcccatcag taaacgtata tgcaaagaat
    10261 gccgttacaa tgactgctat aacagcaaac gattttacca ggaacataaa tttaattttt
    10321 ttattttcaa tatatgaaag gtaaaggatg aatgctataa atatactaaa tattggtcct
    10381 ttgttaccat gcaagaaaat aagtatacag ttaaataaaa ctatggaaat acaaaataac
    10441 tttgattttt tgtatgtaaa gaacgcgcaa atagaagcga caagagaaaa cattaatgaa
    10501 ggatagaagt atataccata ccctgttctg gttaattcgt atattcttct tgggctaagt
    10561 atatactctc tgaactccat caacactgga aggtaaatga taaaagcaag gaaggtgaat
    10621 aacaatgaag taaacacata ccttggttta tttttcgtgt ttgatttgtt gtatatgggt
    10681 tttctttgtg tgtaaagata agaaataaca aatgatgcta tgtatgttat atagcaagta
    10741 tagaaaaaca aatattccac tgtataattc tgcacctctg agaggtatac aaatatacct
    10801 tcaaacacgt acagtgtagg gactgttatt atcaggtatg ggaccattac atttattatt
    10861 tttccctcaa ttcttacgga aagagtatag agataaacta taaataataa gcataatgca
    10921 atgtatgaaa ttataagcat atagagcctt tagaaaaaat gcttagtatt aaaaatatta
    10981 ccatcaggca aataaggtgt ggtacggaaa atcttctggc aagatattct gaatctggta
    11041 gtctataatc attactcatc actatcttcc cgatatcaaa accgtgttat tgaaatatta
    11101 acactcatta acactcctat ctactgcgcc tccgatagca tgaagctatc aagcgtttgc
    11161 agcacaaaca tcaaacaatg taaatgcttt tgataattac gcatgattgt tactgtgttt
    11221 atatacagtg gcattcgaag attcatcatg aggttcccga gtcctgtaaa agactataca
    11281 gagaaagagc tatcactcga cgagtaattc atctcacatc gtgccgcgac atacttcaag
    11341 caacacagac gaattacaag tacggcatca taagtgagac gttgctagtt atagaagctt
    11401 catagcagca tgtaatggct ctttgctggt atgtgctttg gaaagtgggt ttcgtattgt
    11461 gcgttatcgc atgctgccag gtccccatct ggagaatata gatagcggtc gtcgtgaaaa
    11521 gctatctgat gtgaatgcct catacggtgg cagtaagccg agattcagag tgaccatgta
    11581 catcattaac gatacgcgtg ccgggtagtg tgttgggatt caggttctgt agaacagaaa
    11641 gatgcaatct cccttttttt agtgttacca tcatcatgcc ggacgaaaat agcgattttc
    11701 gtctgtgtcg aaggttgtgc gccaatttag caatggttgg ctagatggat acacaactca
    11761 ctgtcaataa attcattttc tctttgtatg tgatcttgcg tatgggtcac cactgcaaat
    11821 aaggatatta catgcctgtt attactcttc ctgatggcag ccaacgccat tatgaccacc
    11881 ctgtaagccc gatggatgtt gctctggaca ttggtcctgg cctggcgaaa gccaccattg
    11941 cgggccgtgt gaatggcgag ctggttgatg cttccgatct gattgaaaat gatgcgacgc
    12001 tttccatcat caccgcaaaa gatgaagagg gtctggagat cattcgtcac tcttgcgcgc
    12061 atctgttagg tcacgctatc aagcaacttt ggccgcacac gaaaatggcg atcggtccgg
    12121 ttgtcgacaa cggtttttac tatgacgttg atcttgaccg cacgctaact caggaagatg
    12181 tcgaagcgct cgaaaagcgg atgcatgagc tcgccgagaa aaattacgac gttatcaaga
    12241 agaaagtcag ctggcacgaa gcgcgtgaaa ccttcgtgaa gcgtggtgaa agctacaaag
    12301 tttccattct tgatgaaaac attgctcatg atgacaagcc aggcttgtac catcatgaag
    12361 aatatgtcga catgtgtcgt ggtccgcacg tgccgaatat gcgtttctgc catcacttta
    12421 aactgatgaa aactgccggc gcatactggc gcggtgacag caataataag atgttgcagc
    12481 gtatttacgg tacggcatgg gcagataaaa aagccctgaa cgcttatctg cagcgcctgg
    12541 aagaggccgc aaaacgcgac caccgtaaaa ttggtaagca gctcgacctg tatcatatgc
    12601 aggaagaagc gccgggcatg gtgttctggc ataacgacgg ctggactatc ttccgcgagc
    12661 tggaggtctt tgttcgttct aaactcaaag agtaccagta tcaagaagtt aaaggcccgt
    12721 tcatgatgga ccgtgtgctg tgggaaaaaa ccgggcactg ggacaactat aaagatgcga
    12781 tgttcaccac atcttcagaa aaccgcgaat attgcatcaa gccgatgaac tgcccgggcc
    12841 acgttcagat ctttaaccag ggtctgaaat cctatcgtga tttgccgctg cgtatggcgg
    12901 aattcggtag ctgccaccgt aacgagccat caggcgcgct gcatggtctg atgcgcgtac
    12961 gcggctttac gcaggatgat gcgcatatct tctgcaccga agagcagatc cgcgatgaag
    13021 ttaacgcttg tattcgtatg gtctacgata tgtacagcac ctttggcttc gagaagatcg
    13081 tcgtcaaact ttccactcgt cctgataagc gtatcggcag cgatgagatg tgggatcgtg
    13141 ctgaggcgga tctggcggtt gcgctggaag aaaataatat cccgtttgag tatcaactgg
    13201 gtgaaggcgc attctacggt ccgaaaattg aatttacctt atatgactgc ctcgatcgtg
    13261 catggcagtg cggtacagta cagctggact tctccttacc gtctcgtctg agcgcctcct
    13321 atgtaggcga agacaacgag cgcaaggtgc cggtaatgat tcaccgtgcg attcttgggt
    13381 cgatggaacg cttcatcggt atcctgaccg aagagttcgc tggtttcttc ccgacatggc
    13441 tcgcgcctgt tcaggtagtc gtgatgaata ttaccgattc gcagtctgaa tacgttaacg
    13501 aattgacgca gaaactacaa aatgcgggca ttcgtgtaaa agcagacttg agaaatgaga
    13561 agattggctt taaaatccgc gagcacactt tacgtcgtgt cccttatatg ttggtctgtg
    13621 gtgataaaga ggtggaagca ggcaaagttg ccgttcgcac ccgccgcggt aaagacctgg
    13681 gcagtctgga cgtaaatgac gtgattgaga agctgcaaca agagattcgc agccgcagtc
    13741 ttcaacaact ggaggaataa agtattaaag gcggaaaacg agttcaaacg gcgcgtccga
    13801 atcgtattaa tagcgaaatt cgcgcgcaag aagttcgctt aacaggtctg gaaggcgagc
    13861 agcttggtat tgtgagtctg agagaagctc tggaaaaagc tgaagaagcc ggagtagact
    13921 tagtcgaaat cagccctaac gccgagccgc cggtttgtcg tataatggat tacggcaaat
    13981 tcctctatga aaagagtaag tcttctaagg aacagaagaa aaagcaaaaa gttatccagg
    14041 tgaaggaaat taaattccgt cctgggacag atgaaggcga ctatcaggta aaactccgca
    14101 gcctgattcg ctttctcgaa gagggcgata aggccaagat cacgctgcgt ttccgcggtc
    14161 gtgaaatggc ccaccagcaa atcggtatgg aagtgcttaa tcgcgtgaaa aacgatttgc
    14221 aagaactggc agtggtcgaa tccttcccaa cgaagatcga aggccgtcag atgatcatgg
    14281 tgcttgctcc taagaagaaa cagtaaggcc ttcaagtaac aattctgtga agccttcggg
    14341 cttcacaggt tttgttcgcc tatgtttcgt ttattaacaa tgcgaagtgg aagttattaa
    14401 aatgccaaaa attaagaccg tacgcggtgc tgctaagcgc ttcaaaaaaa ccggtaaagg
    14461 tggttttaag cacaagcacg ctaacctgcg tcacattctg accaaaaaag cgactaaacg
    14521 taaacgtcac ctgcgtccga aagccatggt ttctaaaggc gatctgggct tggttatcgc
    14581 gtgcctgccg tacgcataag ccgttaacgt ttttaacttt ttaattagaa tagatacagg
    14641 agagcacata tggctcgcgt aaaacgtggt gtaattgcac gcgcacgtca caagaaaatt
    14701 ttgaaacaag ccaaaggcta ctacggtgcg cgttctcgcg tataccgcgt tgccttccag
    14761 gcagttatca aagctggtca gtatgcttac cgtgaccgtc gtcaacgtaa gcgtcagttc
    14821 cgtcaactgt ggattgcgcg tatcaacgca gcagcacgtc agaacggtat ttcttacagc
    14881 aaattcatca acggcctgaa aaaagcctct gttgaaatcg accgtaagat cctggctgat
    14941 atcgccgtat tcgacaaagt cgcgttcacc gcgctggttg aaaaagcgaa agcagctctg
    15001 gcataagcca gtgaaaagag ggagcctggc tccctctctt ttatttactg ttcagtgagt
    15061 tgacaattga cctgtaaccc ttttcaataa aggatattcg gttttaccac ataaggtaac
    15121 gcaagcatga acgctgctat tttccgtttc tttttttact ttagcacctg atcccaggag
    15181 gctagcgcgt gaaaaacgaa acgaaaaaca gcgtaaaaaa gcctcctgat ggaggctttt
    15241 tttgtatctg aaatcgagag attacgtcca atgaaccggt gtcttcaccg acacaatgag
    15301 gaaaaccatg tcacatctcg cagagctggt tgccaatgca gcggccgcca ttaaccaggc
    15361 gtcagatgtt gccgcgttag acaatgtacg cgtcgaatat ttgggcaaga aagggcattt
    15421 aacccttcag atgacgaccc tacgcgatct gccgccggaa gagcgtccgg cagccggggc
    15481 agtcattaac gccgcgaaag agcaggtaca acaggcgctt aacgcgcgta aagccgagct
    15541 ggaaagcgca gcgcttaacg ctcgtctggc cgctgaaact atcgatatct ccctgccggg
    15601 acgccgtatt gagaacggcg gtctgcatcc ggtcacgcgt accattgacc gtattgaaag
    15661 tttcttcggc gagcttggtt ttaccgtggc gactggcccg gaaatcgaag atgactacca
    15721 taacttcgat gcgttaaaca ttccgggtca tcacccggcc cgcgccgatc atgatacctt
    15781 ctggtttgac gcgacccgtc tgctgcggac ccagacgtct ggtgtccaga tccggacgat
    15841 gaaagcgcag caaccgccga tccgtattat tgcgccgggc cgtgtatacc gtaatgacta
    15901 cgaccagacg catactccga tgttccatca gatggaaggt ctgattgttg ataccaacat
    15961 cagcttcacc aacctcaaag gtacgctgca cgacttcctg cgtaatttct ttgaggagga
    16021 tctgcagatt cgcttccgtc cttcttattt tccgttcacc gaaccttctg cggaagtgga
    16081 tgtgatgggt aaaaacggca aatggctgga agtgctgggc tgcgggatgg tgcatccgaa
    16141 tgtgctgcgt aatgtcggta tcgatccgga aatctattct ggcttcgctt ttggtatggg
    16201 gatggaacgt ctgaccatgt tgcgttacgg cgtcaccgac ctgcgttcat tcttcgaaaa
    16261 cgatctgcgt ttccttaaac agtttaaata aaggcaggat aaaacaatga aattcagcga
    16321 actgtggtta cgcgagtggg ttaacccggc aattgatagc gatgcgttgg ctaaccagat
    16381 tacgatggct ggcctggaag tagacggcgt tgagccggtc gcgggaagct tcaatggcgt
    16441 tgtggttggg gaagtggttg agtgcgccca gcatccgaac gctgacaaat tgcgtgtaac
    16501 gaaagtcaac gtcggcggag aacgcctgtt ggatatcgtc tgcggcgcgc caaactgtcg
    16561 tcaggggctg aaagtagcgg tggccactat tggcgctatt ctgccgggcg atttcaaaat
    16621 taaagcggcg aaactgcgcg gcgaaccgtc tgaagggatg ctgtgctcct tctccgaact
    16681 ggggatttcc gacgatcaca gcggcattat cgaactgccg gcggatgcgc cgttgggtac
    16741 cgacatccgt gaatacctga agcttgacga caataccatc gaaattagcg tcacgccgaa
    16801 ccgtgcggat tgcttaggta tcatcggcgt tgcgcgtgat gtggcggtac tgaacaaagc
    16861 gccgctccag gagcctgaaa tggcgccggt tacggcaacc atcagcgata cgctgctgat
    16921 tacggtagag gctgttgatg cgtgtcctcg ctatcttggc cgggtggtaa aaggtatcaa
    16981 tgttaacgcg ccgacgccgc tgtggatgaa agagaaactg cgtcgctgcg gtattcgctc
    17041 catcgatgcg gtggttgacg tcacgaacta tgtgctgctc gaactgggtc agccaatgca
    17101 tgctttcgat aaagatcgca ttgatggcgg tattgtcgtg cggatggcaa aagagggtga
    17161 aaccgtcgtc ctgctggacg gtagcgaagc gacgttaaat gcggacacgc tggtgatcgc
    17221 cgatcaccat aaggcgctgg ggatagccgg tatttttggc ggcgaacatt ccggcgtgaa
    17281 cggcgaaacg caaaatgtgc tgctggagtg tgcgtacttt aatccgctgt ctatcaccgg
    17341 tcgcgctcgc cgccacggtc tgcataccga tgcgtctcac cgctacgagc gcggggtgga
    17401 cccggcgctg caatataaaa cgatagagcg cgctactcgt ctgcttcttg atatctgtgg
    17461 cggtgatgcg ggtccgataa ttgatgtgag caacgaagca acgttgccga aacgcgccac
    17521 cattactctg cgtcgcagta aactggatcg cctgatcggg catcatattg cggatgagca
    17581 ggtcagtgat attctgcgtc gtctgggctg tgaagtgacc gaagggcagg acgagtggaa
    17641 agccgtggcg ccgacctggc gtttcgatat ggagattgaa gaagatctgg tggaagaggt
    17701 ggcccgcgtt tacggctata acaatattcc ggacgagcca atccaggccg gtttaatcat
    17761 gggaacgcac cgtgaagccg atctgtcgtt gaagcgggtt aaaaccatgc tgaacgacaa
    17821 aggctatcag gaagtgatta cctatagctt tgtcgatcct aaagtacaac agctcatcca
    17881 tccaggcgca gaagcgctgc tgctgccaaa ccctatctcc gttgagatgt cggcgatgcg
    17941 tctgtctctg tggagcggat tgttggcgac ggtggtctat aaccaaaacc gtcagcagaa
    18001 tcgcgtgcgt atttttgaaa ccggtttacg tttcgttccg gatacacaag ccaatctggg
    18061 tattcgacag gatctgatgc tggctggcgt gatttgcggt aaccgctatg atgagcactg
    18121 gaacctggca aaagagaccg ttgatttcta tgatttgaaa ggcgatctgg aagcagtatt
    18181 ggatttaacc ggcaaactgg gtgatatcca gtttaaggcg gagatgaatc cggctctgca
    18241 tccgggacag tctgcggcga tttatctgaa agatgaacgt attggtttta ttggggttgt
    18301 tcaccctgaa ctggaacgta aactggatct gaatggtcgt acgctggtgt ttgaactgga
    18361 atggaataag ctcgcagacc gtatcgtgcc gcaggcgcgg gagatttcac gcttcccggc
    18421 caaccgtcgc gatattgcgg ttgttgttgc agaaaacgtt cccgcagcgg atattttatc
    18481 cgaatgtaag aaagttggcg taaatcaggt agttggcgta aacttatttg acgtgtaccg
    18541 cggtaagggt gttgcggagg gttataaaag cctcgctatc agcctgatcc ttcaggatac
    18601 caaccgtaca ctcgaagaag aggagattgc cgctaccgtc gccaaatgtg tagaggcatt
    18661 aaaagagcga ttccaggcat cattgaggga ttgaacctat ggcgcttaca aaagctgaaa
    18721 tgtcagaata tctgtttgat aagcttgggc ttagcaagcg ggatgccaaa gaactggttg
    18781 aactgttttt cgaagagatc cgtcgtgctc tggaaaacgg tgagcaggtg aaactctctg
    18841 gttttggtaa cttcgatctg cgtgataaaa atcaacgtcc ggggcgtaac ccgaaaacgg
    18901 gtgaagatat tcctattaca gcacggcgcg tggtgacctt cagacccggg cagaagttaa
    18961 agagccgggt cgaaaacgct tcgcccaaag aagagtaatc agatccaggc ataacatcca
    19021 tcagagtgta ttgcggcaga tacgctgcca tcccgaaagt agatcagcgg gatgacagcg
    19081 tatttgtcag cctgaaagat gacccgtata actaaaaagg ccgcattgcg gccttttttc
    19141 tttcaagtaa aggataccca ccgtaaaatc acgctacctc ttttcagctg aatggataac
    19201 atgctgactt ttgcccgcca acaacagcga cgaaacgttc gctggcttct gagcctgtca
    19261 ctgctggtgc tactggctac acttctgagc ttatgcgcag gcgaacagtg gattgccccc
    19321 ggtgactggt taagcgcccg gggggaactg tttgtctggc aaattcgcct tccccgcacg
    19381 cttgcggtat tgctggttgg cgctgcgctg gcgctatctg gcgccgtgat gcaggcgctg
    19441 tttgaaaacc cacttgctga accgggtctg ctcggcgttt cgaatggggc cggtgttggg
    19501 cttattgccg ccgtcttact ggggcagggg caactgccag gatgggcgct ggggctgtgc
    19561 gctatagccg gcgcgctcat tattacgtta atcctgctgc gttttgcgcg tcgccatctc
    19621 tctaccagcc gcttgttgtt ggcgggcgtc gcgctgggca ttatctgtag cgcgctgatg
    19681 acgtgggcta tctatttttc cacctctttc gatctgcggc aattaatgta ctggatgatg
    19741 ggaggatttg gcggcgttga ctggcagcag agctggctaa tgattgcgct catcccggta
    19801 ctgatctgga tatgttgcca gtcgcaaccg ctgaatatgc tggcgctagg ggaaacctcg
    19861 gcgcggcagc ttggcctgcc gctgtggctc tggcgcaatt tgttggtcat cgccaccggc
    19921 tggatggtgg gcgtcagcgt ggcgatggcg ggggcgattg gttttatcgg tctggttatt
    19981 ccgcacatcc tgcgcttatg tggtttaacc gatcaccggg ttttacttcc cggctgcgcg
    20041 ctggccgggg ctatcgccct gctattggct gatgtggtcg cccgactggc gctggcgtcg
    20101 gctgaactgc ctatcggggt ggtcaccgcc acattggggg caccagtgtt tatctggctg
    20161 ctactcaaat ccgcgcgtta gcgcatcggt aaacaactgc tttcatcatt cgcagtctat
    20221 gattaaaggc taacgatgaa acccgctatt ctaccgacat cagggagaca ccatgcaaaa
    20281 ctcgcttctt aatactcacg ttacgacgat tgatggagag gtcactacac ttgaaaaata
    20341 cgccggaaaa gtgctgctca ttgtaaacgt cgcctccaga tgtggcctga cgccgcaata
    20401 tgaacagttg gaaaatatcc agaaggcgtg ggcagatcag gggtttgtcg tgttgggttt
    20461 tccctgcaac cagtttatgg ggcaggagcc aggcagcgaa gaggagatta aaacctattg
    20521 tgccagcacc tggggcgtca cgttcccgat gttcagtaaa attgatgtga atggcgacgc
    20581 gcgccatccg ctgtatcaaa aactgatagc cgctgcgcca acggcagtcg cgccggagaa
    20641 gagcggcttt tacgaacgga tggtaagcaa agggcgtacg ccactctatc cggatgatat
    20701 tctgtggaat tttgaaaaat ttttggtagg ccgggatggt caggtggtac agcgtttttc
    20761 gccggatatg acgcctgaag atcctattgt gatggaaagc ataaaaatcg cgttggcaaa
    20821 ataatgtctc aattgatgca attaaaggac gtcgccgaga gcacccgcct ggggccgctt
    20881 tccggcgaag taagcgcagg agagatcctt catcttgtcg ggccgaacgg cgccgggaaa
    20941 agcacgctac tggcgcgtat ggcggggtta acctccggcg aggggagcat caggtttggc
    21001 ggagcgccgc tggaggcatg ggcgacggca acgcttgccc aacaccgcgc ttatcttgcg
    21061 caacagcaaa atccgccgtt cgccatgccg gtctggcatt acctgacatt gcatcaacct
    21121 gataaaacgc gaaccgggca gcttaacgag gtggccgata tgcttggatt gggcgacaaa
    21181 ctggggcgaa gcgtgaatca gctttccggt ggcgagtggc agcgcgttcg ccttgctgcc
    21241 gttgtactac aaattcatcc cgacgctaat ccggtcggtc aattattgct gcttgatgag
    21301 ccgatgaaca gtctcgatgt tgcgcaacaa aacgctctgg atcgggtatt acatcattta
    21361 tgtcaggcag gaattgcgat tgtgatgagt agccacgatc tgaaccacac gctgcgccat
    21421 gcgcataaag cctggttact aaagcgcggt aaactcattg cctgcggccg ccgggaagag
    21481 gtgctcaccc cctcttatct ggcgcaagcc tacggtttgc gctttcgacg actcgacgtc
    21541 gaggggcatc caatgctcat ttcggccact taagtaaaat cgtttcttga aaagcaggta
    21601 atttcgacgc taaattaata ccaaaataaa aacagaggat tgttgcggca tgcgtttttg
    21661 gcttcttgtt atcacagcat tgttcctggc aggatgcagt actcatcggg caccggcgcc
    21721 aaatgccaga ttatcagact ccattaccgt cattgcgggt ctgaacgatc agttgcagtc
    21781 ctggcgcggt acgccatacc gctacggcag catgagtcgc agaggcgtgg actgttccgg
    21841 ctttgtggta gtcactatgc gcgacaagtt tgatttgcag ttgcctcgtg atacgcgtga
    21901 acaatcaaaa atcggcacca gaatcgataa agatgaattg ctgcccggag atttggtttt
    21961 ctttaaaacc ggttcgggcg aaagtggttt acatgttggt atttacgata caaataatga
    22021 gtttattcat gcctctacca gtcgtggcgt gatgcgttca tcgctggata atgtgtactg
    22081 gcgaaaaaac ttctggcagg cacggcgaat ttaacctcgc agacgatata aattttatag
    22141 tctattttta acatatcgcc agttgaactt atgacatctg ttgtcatcat atataatgat
    22201 ataaccgtag catttacaaa cgtactttta ttaaaaacgg gcgtgctcac gccctgttaa
    22261 aagtacaaca ttggatattg gtttataatc agagtaagtt aaaaaaagga accggttcac
    22321 cggtaaacaa gaaaaatgat gacgcttcaa ttagtatctg aagttacgtc tgtttccgtc
    22381 cgtagtgact ggatggtgaa tagcgcccta accatgggac tggcgtaatg attgcttcac
    22441 ttgatgagct ttaccattcc gaactctttt tccttcccgt catggatgaa aacgctcggc
    22501 ttgttggttt agagattatt gcaacgtttg ccgctgaaga cggcgccgtg cggatgccga
    22561 ctgagttggt agcgcctcgc ctttcggtgg aggaacaata ctgtctgttt gttgaaaaac
    22621 tggcgttgtt agaaacctgt cagcactttt ttattcagca taaacttatt gcatggctta
    22681 atttaccgcc tgcaattagt gacttattat tattagatag cgaacttttt tcccgggcag
    22741 cgcgctttcc gttttttgaa gtagctataa atgagaatta tcctgggtta aaccagggca
    22801 aaaacaatga aacgttagct aatctggcaa tgcatttccc attaattttg gcaaattttg
    22861 gggcaggcga ggcgtcgact aaagctattt tcgatgggct tttcaaacga gtcatgttgg
    22921 ataaaaattt tattcagcag cgagctgaaa tgatctcatt cgaaccattc atgcacgcta
    22981 ttgttgccca gatctcctcc agctgcgagt cgctgatgat tgccggtatt gatactgagg
    23041 cgatgtttgc gcgcgcagcg ccattggggt ttagcgcatt ccagggcgga ctatggcctc
    23101 cggtgccggt aagccagctc attaaactcg ttcagcgata acctttctgt ttgccggtgt
    23161 ttaaccggtg attaaccgtc tacactgaag acaggaggcc ctatgaccct gtcttttact
    23221 gcccgttggc gcgatgaatt gccagcaacg tataccgcgc ttttacccac accgttaaaa
    23281 aatgcgcgac tgatttggta taacgacgaa ctggcgcagc agttagccat tcccgcttcg
    23341 ttatttgacg ctaccaatgg cgctggcgtt tggggcggcg aaaccttatt acccggtatg
    23401 tcgcctgtcg cgcaggtata tagcgggcat cagttcggca tctgggcggg acaactcggc
    23461 gacggacgcg gtattttgct gggcgaacag ctcctggcgg atggctcgac cctcgactgg
    23521 catctgaaag gcgccggatt aacaccctat tcgcgaatgg gagatggacg cgccgtcctg
    23581 cgttcaacca tacgagaaag tcttgccagc gaagctatgc attatctggg tattcccact
    23641 acgcgcgcgt tatctatcgt agccagcgat acgccggttc agcgagagac gcaggaaacg
    23701 ggcgcgatgt taatgcgtct ggcacaaagt catatgcgtt ttggtcattt cgaacatttc
    23761 tattaccgcc gtgagccgga aaaagttcag caactggctg atttcgctat tcgtcattac
    23821 tggccgcaat ggcaggatgt agcggaaaaa tatgctttgt ggtttgaaga ggtggcggcg
    23881 cgtaccggaa gactcatcgc cgagtggcaa accgtcggtt tttcgcacgg cgttatgaat
    23941 acggataaca tgtcgattct ggggctgacc atcgactatg gcccctttgg ttttctcgac
    24001 gactacgatc ccggcttcat tggtaaccat tccgatcatc agggacgtta ccgcttcgat
    24061 aatcaaccgt cggtggcgct gtggaattta caacgtctgg cgcagacgtt aacccctttt
    24121 attgagatcg acgcgttaaa cagagcgctg gatcgttacc aggacgcgtt gttaacgcac
    24181 tatgggcagc gaatgcgcca gaagctgggc ttctttaccg agcaaaaaga cgataacgct
    24241 ttactgaatg aattgtttag tctgatggcg cgcgaaggga gtgattatac ccgtacattt
    24301 cggatgttaa gccatacgga gcaacagagc gcctcctcgc cgttgcggga tacgtttatc
    24361 gatcgcgcgg cgttcgatgc ctggttcgac cgctaccggg cgcgattgcg cacagaggcg
    24421 gtggatgacg cgctgcgcca acagcagatg caacgcgtga atcctgcgat tgtgttgcgc
    24481 aactggctgg cgcaacgcgc gatagatgcg gctgaacaag gagacatggc ggaactgcat
    24541 cggttgcatg aagttttacg tcaacctttt accgatcgag atgatgacta tgccagccga
    24601 ccgccggagt ggggaaagcg gctggaggtc agttgttcaa gttagccaga tgccagcaga
    24661 atcgtctgct ggcgggagcg ctatttggtt aacagtagct taccggcctg agttttgcgc
    24721 aacagatact cctgaccgtt gtgatcgata atgactttgc cgtccggacc taatagcgcc
    24781 tgactgttga cgcgccgttc agcggcaggg agaagcgttt cattgtctat ttccttaggg
    24841 tgaggcagct cggtgttatc catacgcgac atgttattta ttaataatca aactcacaat
    24901 gattattatt atcaataatt aatgcgataa cagcaagtgc taattctgtg gagtgatata
    24961 cgcgcgcgta gagaaaaggg tgggtaacgc atcgaagaaa cgcccatccc ggcaggatgg
    25021 gcgagctatt aaaagcggct gtctaccgcc gcggcaagtt tttccaacag aacttccgta
    25081 tcttcccagt tcaggcaggg atcggtaatg gattgaccat agattaacgg ttgaccgctg
    25141 ataatttttt gcgtgccttc ccgtaaaaaa ctctctgcca taatcccggc aattgccgtg
    25201 gagccattac gaatctgctg gcaaatatca tcacatacgt ccaactggcg gcgatgctgt
    25261 ttttgacagt tgccgtggct gaagtcgacg accagatgtt ccggcagatc aaattcatgc
    25321 aacgtgtcgc aggcggcggc aatatcttca gcgtggtagt tcggtttttt accgccgcgc
    25381 atgatgatgt gcccatacgg gttgccactc gtttggtaga tagtcatctg tccgtcttta
    25441 tccggcgaga gaaacatatg actggcgcgg gaggcgcgaa tagcatcaac ggcaatgcgg
    25501 gtattgccat ccgtaccatt tttaaagccg accgggcaag agagcgcaga agccatttcc
    25561 cgatggattt ggctttcggt ggtacgcgcg ccaatcgttc cccaactgat cagatcggca
    25621 ataaactggc cggtgaccat atcaagaaat tctgtggcgg tcggtactcc cagttcgttc
    25681 acctgcaata gcaagcgacg cgccagttca agcccatgat tgacgcggta actgccattc
    25741 aagtcgggat cggaaatcag gcctttccat cccacgacgg tgcgcggttt ttcaaaatag
    25801 gtgcgcatga cgatttccag acgcgcctga tgcttttggc gttgtgcctg gagctgcgtc
    25861 gcgtattcca tggcagcatt cagatcgtga atcgaacagg ggccaatgac gaccagtagc
    25921 cgtggatctt caccatttaa aatcttttct atccggcgtc gggagtcggt aacgtgactg
    25981 gcgacggagg acgatacagg ataccgctgc gcgagttcgg ttggtgttac caggctgtcg
    26041 atacgcgcag tacggagttc gtcggttctg ttcattacaa gtctcagaaa tttgttgttt
    26101 caacggcagg actaccggga agtgatgggc atcacgataa accaatccct gctgatttca
    26161 agtgcgaggc gtgtcacacc tcgcaggcag aacggcatga taacaaaaac caatccatta
    26221 aactagttta ctagtacatc ctgcggttaa gccccataat atcgagaatc ttggtggcta
    26281 tctcttcaac ggaataattg gtgctgttca ggcaggggat ctgattctta cgatacagcg
    26341 cttcgacctc cgccacttcc atgcggcact gacgcaacga ggcatagcga ctgttttcac
    26401 ggcgttcttc gcgaattgcc gccaggcgtt cagggtcaat tgtcaggccg aacagtttat
    26461 gttgtagcgg ttttaacgat gtgggcagcg tcaaattatc catatcatcg gcgatgaaag
    26521 ggtagttagc cgcacgaata ccgaattgca ttgccagata gagactggtg ggcgtttttc
    26581 cacagcgcga aacgccaagt aaaatgacct gggcctgatc gaggttgcgc aatgaaatgc
    26641 catcatcatg cgccagggta taatcgatag cggcaatacg ggcgtcatac ttgttcaggt
    26701 tacccggatt aagcccatga gtacgatgag cgatcggcgt cggatccagt ttcatctcct
    26761 gctgaagcgg cgccaccagc gcctggacga tatcctggca gaagccttcg ctctgcaaga
    26821 tgatggcgcg aatttcaggt aaaacaatcg agtaaaacac cagcgggcga acgccggttt
    26881 gctgataaat ggcgtcaatt tggtctttga cggcgcgggc gcgactttcg ttttccacga
    26941 atggcagcgt gatgctgctg atcgtcaccg gaaactgcga cataaccgcg tgacccagga
    27001 cctcggcggt gatggcggta ccatcagaaa tatagaaaac atggcgatca acaacattat
    27061 ccattctgtt catcctgaag agtaaacata attatctgaa agcataaatt aaaagtaacg
    27121 ggaaacgtat aacttgtcgc ttattttata aaatgacagg cactttttat aattaatgaa
    27181 aagtgtgttt catttccttg aaacgcagtt tatgccggga gtgattaagg gaatgccgtg
    27241 ctatgcgcgg gtttgcgcaa ctacgtaaac aatctgaaaa aatgaaaaaa taaatttgct
    27301 tgaacgattc accgtttttt tcgcgggttt aagtatgcca ggataaatac gcaactatgt
    27361 gtttcttaaa ctcgttcatt tatcacaaaa ggattgttcg atgtccaaca atggctcgtc
    27421 accgctggtg ctttggtata accaactcgg catgaatgat gtagacagag ttgggggcaa
    27481 aaatgcctcc ctgggtgaaa tgattactaa cctttccggc atgggcgtat ccgttccgaa
    27541 tggttttgca accactgccg atgcgtttaa ccagtttttg gatcaaagcg gcgtaaacca
    27601 gcgcatttat gagctgctgg ataagacaga tattgatgat gtctcccagc tggcgaaagc
    27661 gggcgcgcag atccgccagt ggattatcga cactcctttc cagccggcgc tggaaaacgc
    27721 catccgcgat gcctatgcgc agctttcgtc ggatgatgaa aatgcctctt ttgccgtgcg
    27781 ttcctccgcc acggcggaag acatgccaga tgcttcgttt gcgggtcaac aggaaacgtt
    27841 tcttaacgtt cagggcttcg atgcggtact ggtggcagtg aaacacgtat ttgcttctct
    27901 gtttaacgat cgcgccatct cttatcgcgt tcaccaggga tatgatcatc gcggcgtagc
    27961 gctttccgct ggcgtgcagc ggatggttcg ctccgatctc gcctcgtcag gggtgatgtt
    28021 ctctatcgat accgaatccg gctttgacca ggtggtcttt atcacctcgg catggggact
    28081 gggtgaaatg gtggtgcagg gcgcggttaa cccggatgaa ttttatgtcc ataagccaac
    28141 cctggcggca ggccgtccgg ccatcgtacg ccgcaccatg gggtcgaaaa aaatccgcat
    28201 ggtttacgcc gccacccagg agcacggtaa gcaagtgaag attgaggatg tgccgcagga
    28261 acagcgcgac attttctcgc tcaccaacga agaagtgcag gaactggcga aacaagcggt
    28321 gcagattgag cagcactatg gtcgtccgat ggatatcgaa tgggcgaaag acggtcatac
    28381 cggtaagctc tttattgtgc aggcacgtcc ggaaaccgtg cgctctcgtg gccaggtgat
    28441 ggagcgttat acgttacatg cgcaggggaa aatcattgcc gaaggtcgtg ccattgggca
    28501 tcgtatcggc gcaggtacgg taaaagttat tcacgatatc ggcgaaatga accgtattga
    28561 gcctggcgat gtgcttgtca ccgatatgac cgacccggac tgggaaccga tcatgaaaaa
    28621 agcggcggcg attgtcacta accgtggcgg gcgcacctgt cacgcggcga ttatcgcccg
    28681 cgaattgggc attccggcgg tagtcggctg cggcgacgcc accgaacgca tgaaagatgg
    28741 cgaaaaagta accgtctcct gtgcggaagg tgataccggt tatgtgtatg ccgacatgct
    28801 ggatttcagc gtaaaaagct ccagcgtaga taccatgcca gagctaccgc tgaaggtcat
    28861 gatgaacgtc ggcaacccgg acagggcatt tgactttgcc tgcctgccga atgaaggcgt
    28921 aggtctggcg cgactggaat tcatcattaa ccgtatgatt ggcgttcacc cgcgcgcgtt
    28981 gctggagttt gacgaccagg atgccgcgct gcaaaacgac attcgtgaga tgatgaaagg
    29041 gtttgactcg ccgcgtgaat tttacgttgg tcgactgacg gaagggatcg cgacgttagg
    29101 cgccgccttc tacccgaaac gcattatcgt tcgcctgtct gactttaagt ccaacgaata
    29161 cgccaacctg gtcggcggcg aacgttatga gccgcatgaa gaaaacccga tgctgggctt
    29221 ccgcggcgcg ggtcgttacg tcgcagaaag tttccgcgat tgttttgcgc tggaatgcga
    29281 agcggtgaaa cgcgtgcgca acgatatggg ccttaccaac gtcgaaatca tgatcccgtt
    29341 cgtgcggacg gtcgaccagg cgaaagcggt catcgaagag ctggcgcgcc agggacttaa
    29401 acgcggcgag aacgggctga agatcatcat gatgtgcgag attccgtcca atgccttgct
    29461 ggctgaacag ttcctcgagt attttgatgg cttctcgatt ggttctaacg acatgacgca
    29521 gctggcgctg gggctggatc gcgattccgg cgtggtgtct gaactgtttg acgagcgtaa
    29581 cgacgcggtg aaagcgctgc tatcgatggc gatccgcgcg gcgaaaaaac agggcaaata
    29641 tgttggaatt tgcggccagg gcccgtccga ccatgaagac tttgccgcct ggctgatgga
    29701 agaggggatc gacagcctgt cgctgaaccc ggacaccgtg gtgcagacct ggctgagtct
    29761 ggcggaactg aagaagtaaa ccgcgaccag ataacgctat gcttatccgg cctgcacaag
    29821 aaacatgttg tgtcggccgg atagggcgta agttgcccga cgcctgcata atgccggatc
    29881 aggcgttgtg cagaatcatt aatacactgc gtagatcatt tacggcgatt tgccccggcg
    29941 ctgaagcctg cttcaccgcg ccaaacgtgg cggcagagcc aaacacttcc cctgccagac
    30001 gtgaaatgac accctctttc gccattgaca tagtaattac cggacggtcg gcgtaatgtt
    30061 gctgcatctc cagcgtggca gtgagtaacg ttaatacatc atgcttgctt tgcggcataa
    30121 cggcaatctt gggaatatcc gcgccgagtg cttgcatttt acgtagccgc agaaccattt
    30181 cctctgcgga cggcgtctgg tgaaaatcgt ggttagacat cacgacataa acattatgcg
    30241 catgggcata atcgacagtg gctttaacgt cagcatcacc ggtaaatagc tcaagatcga
    30301 tcatatcgac caggccgctg tcgattgcgg cacgattaag cgtgagataa tgctgagtgg
    30361 ttattgtctg ctcgccgcct tctttggcgc tgcggaaagt aaacagtaac ggaatgtcag
    30421 gcatcgcatc gcggataaca cgcgcagcgg taagaacgga ttgagtcgat gcgatatcca
    30481 taaagtgatc cacgcgccac tccagaatat cgaatgtagc ttcgcggtag gccagcgcct
    30541 ccgctttcac gctattgatg tctcttccca tcaacgacac gataattttg ggcatccctt
    30601 cgccaatgat aagatttttt acggtgacgg ttttcatgcg tgtcctgtca gttttttttc
    30661 ttctcgccat tatgaacggt gaggctggcc gcttgaagta aaaaaaaaag cccatcgtag
    30721 gagacgggca aagactacac acagcaattc gttgtttcac tcaggggatt tccatgctta
    30781 taaatcaatg tgttgattta taaccgtgtg ctaatagtag gcatgagcac tttttgcgtc
    30841 gatcagattc gtctcaatag tttaaaaact gtaacggatt tgcgacagaa atgagatgcg
    30901 gcggggaaca gacgggcgaa tcaaaatggg gtgtgcgttg aattgataaa cgtcgctaaa
    30961 gcatcgggcg gcaatgccgc ccgacgggat tatgactgct tgttggcttc ctcgatgtca
    31021 tccagctctt caaggatctc ctctggttca ttcgtcggcg ccggaacttc atgtacccat
    31081 gcggagaaca aacgccaggt cacggccaga agcaccggtc caataaacag accaatcata
    31141 ccgaatgcaa tcaggccgcc gattaccccg gaaaggatca gaagcagcgg taaatcggcg
    31201 cccatgcgga tgagtaccgg gcgaatcacg ttatccagag tgccgacgac ggcgctccaa
    31261 accagcagca cggtgcccca ggtggtgtcg cctgtccagt aaagccagat aatggctgga
    31321 atcaataccg gcaacggccc caactgaacc aggcacgaaa ggatcatcac taccgtcaac
    31381 agggtagcgt aaggcacgcc ggaaatcgcc agcccgacgc cgccaa
//
LOCUS       DAGWFR010000027        30911 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.027, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000027 DAGWFR010000000
VERSION     DAGWFR010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 30911)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30911)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30911
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.027"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..255)
                     /gene="murQ"
                     /locus_tag="MOX77_001372"
                     /gene_synonym="yfeU"
     CDS             complement(<1..255)
                     /gene="murQ"
                     /locus_tag="MOX77_001372"
                     /gene_synonym="yfeU"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461506.1"
                     /note="catalyzes the cleavage of the lactyl ether moiety
                     of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form
                     N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate;
                     involved in MurNAc dissimilation pathway; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramic acid 6-phosphate etherase"
                     /protein_id="HCA3356949.1"
                     /translation="MNLGTLVSETRNPQTMDLDALSTPELVKRFNEQDTLVAEAVKAT
                     LPDVARAVDAAAAALKSGGRIIYMGAGTSGRLGVLDASECP"
     gene            371..1219
                     /locus_tag="MOX77_001373"
     CDS             371..1219
                     /locus_tag="MOX77_001373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HCA3356950.1"
                     /translation="MNCLIRIRQRYPDLAQSDRKLADYLLAQPDTARHLSSQQLAAEA
                     GVSQSSVVKFAQKLGFKGFPALKLAISEALASNPNPHSVPVHNQIRGDDPMRLVGEKL
                     IKENVAAMHATLDVNSEEKLLESVTMLRHARRIVITGIGASGLVAQNFAWKLLKIGIN
                     AVVERDMHALLATVQALAPEDLLLAISYSGERRELNLAADETLRAGAKILAITGFSPN
                     ALQQRATRCLYTIAEEQATRSAAISSTHAQMMLTDLLFMALVQQDLERAPERIRHSEA
                     LVKKLV"
     gene            complement(1258..2175)
                     /locus_tag="MOX77_001374"
     CDS             complement(1258..2175)
                     /locus_tag="MOX77_001374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HCA3356951.1"
                     /translation="MKIAIAGAGAMGCRFGYMLLEAGHDVTLIDGWQEHVDAIRSKGL
                     FVETETTQKYYPIPAMLADESQGEFELVILFTKAMQLDSMLQRIKPLLPAAKVVMILS
                     NGLGNIETLEKYVDRQKIYAGVTLWSSELEGAGHIMATGTGTIELQPIASQDSAQEAK
                     VIATLNSAGLNAEISPDVLLSIWKKAAFNSVMNTYCALLDCNVGGFGQRPGALDLAQA
                     VVDEFVLVAASQNIPLTEQMVMNTVKKVFDPRESGHHYPSMHQDLHKGRLTEIDYLNG
                     AIARIGAQNNIAVPVNTLLTQLIHAKEAQ"
     gene            complement(2197..3393)
                     /locus_tag="MOX77_001375"
     CDS             complement(2197..3393)
                     /locus_tag="MOX77_001375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OFA family MFS transporter"
                     /protein_id="HCA3356952.1"
                     /translation="MSASINRWGMLAAHVCINFVLGGVYAFSYFKTPLMAQYHWDPAT
                     PALAFSINMGIIPLPMIWGGRMIDNGKGKQAIVIGGILFSLGFILSGFVDNLPMLFLT
                     YGVIAGLGSGLAFTGNLNNILKFFPDRRGLASGIVLAGVGVGTLLCTRLAEYFMAQTH
                     DVSRALLYLGIVYLVVIFIVQFFIRSAPAKDSGGIKASPLDKDYRHMLKDLRFWLLFM
                     ILALGVFSGMVISSSSAQIGMTQYGLLSGALVVSLVSIFNSIGRLFWGGLTDKLGGYN
                     TLVIVYLFTCVCMLLLLFFNGNTSVFYFSALGVGFAYAGILVIFLGLTSQNFGMRNQG
                     LNYGFMYFGFAVGAVIAPYVTSAIAKYTGSYNTVFILTTVLLLIGVVLTLITKKYVAT
                     VLAKIH"
     gene            3509..4420
                     /locus_tag="MOX77_001376"
     CDS             3509..4420
                     /locus_tag="MOX77_001376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCA3356953.1"
                     /translation="MNIKQLHSFLILCDELHYGRAASRLFITQPSLSQQIKQLESSLK
                     TILFKRKGRGIKLTKAGIILQRHANKIMLDLKNAENELLPYQDQQRDTISIGVSGSYL
                     VLPAFRNFMAHHPEISLNVKEFSTEQTIKKLTDSAVDIGIVYRTALPAQLSSTMLFED
                     EIIAAIPLSHPLATRERLHLKDLNDQPIIVLNDSLLLRGIITTEFNNRKVVPNVICEL
                     DNHYSCLEYAEAQIGIAFITRSLTHLSTPKNVRLVSLGIPAFFIPVMLVHSNDLSLDN
                     ATICLLKQIKNFYTVDNKSAPEKSWPE"
     gene            4473..4733
                     /locus_tag="MOX77_001377"
     CDS             4473..4733
                     /locus_tag="MOX77_001377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhL family 4Fe-4S dicluster ferredoxin"
                     /protein_id="HCA3356954.1"
                     /translation="MALLITKKCINCDMCEPECPNEAISMGDSIYEINSDKCTECVGH
                     YETPTCQKVCPIPNTILQDPAHVETEEQLWDKFVLMHHADKL"
     gene            complement(4845..5225)
                     /locus_tag="MOX77_001378"
     CDS             complement(4845..5225)
                     /locus_tag="MOX77_001378"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HCA3356955.1"
                     /translation="MAILGLGTDIVEIARIEAVISRSGERLARRVLSDNEWAIWETHQ
                     QPVRFLAKRFAVKEAAAKAFGTGIRNGLAFNQFEVFNDELGKPRLRLWGEALTLAEKL
                     GVAHMHVTLADERHYACATVILES"
     gene            complement(5225..5956)
                     /gene="pdxJ"
                     /locus_tag="MOX77_001379"
     CDS             complement(5225..5956)
                     /gene="pdxJ"
                     /locus_tag="MOX77_001379"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HCA3356956.1"
                     /translation="MAELLLGVNIDHIATLRNARGTDYPDPVQAAFIAEQAGADGITV
                     HLREDRRHITDRDVRILRQTLHTRMNLEMAVTEEMLAIAVETRPHFCCLVPEKRQEVT
                     TEGGLDVAGQRDKMRDACARLAAAGIQVSLFIDADERQINAAAEVGAPFIEIHTGCYA
                     NAETDAEQAKELARIASAATLAARLGLKVNAGHGLTYHNVKAIAALPEMHELNIGHAI
                     IGRAVMTGLKEAVAEMKRLMLEARG"
     gene            complement(5968..6696)
                     /gene="recO"
                     /locus_tag="MOX77_001380"
     CDS             complement(5968..6696)
                     /gene="recO"
                     /locus_tag="MOX77_001380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HCA3356957.1"
                     /translation="MEGWQRAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRS
                     NLKGALQPFTPLLLRYSGRGEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEY
                     ETRFSELFFDYLNCIQALAGTTGSPEPALRRFELALLGHLGYGVNFTHCAGSGERVDD
                     TMTYRYREEKGFFASVVIDNNTFTGRHLKALEAREFPDVDTLRAAKRFTRMALKPYLG
                     GKPLKSRELFRQFMPKRTVKTKKD"
     gene            complement(6708..7613)
                     /gene="era"
                     /locus_tag="MOX77_001381"
     CDS             complement(6708..7613)
                     /gene="era"
                     /locus_tag="MOX77_001381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HCA3356958.1"
                     /translation="MSTDKTYCGFIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTR
                     HRIVGIHTEGPYQAIYVDTPGLHMEEKRAINRLMNKAASSSIGDVELVIFVVEGTRWT
                     PDDEMVLNKLRDGKAPVILAVNKVDNVQEKADLLPHLQFLASQMNFLDIVPISAETGM
                     NVDTIASIVRKHLPEAIHHFPEDYITDRSQRFMASEIIREKLMRFLGAELPYSVTVEI
                     ERFVTNERGGYDINGLILVEREGQKKMVIGNKGAKIKTIGIEARKDMQEMFEAPVHLE
                     LWVKVKSGWADDERALRSLGYVDDL"
     gene            complement(7610..8290)
                     /gene="rnc"
                     /locus_tag="MOX77_001382"
     CDS             complement(7610..8290)
                     /gene="rnc"
                     /locus_tag="MOX77_001382"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004248457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HCA3356959.1"
                     /translation="MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLG
                     DSILSFVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFDLGECLRLGPGELK
                     SGGFRRESILADTVEALIGGVFLDSNIQTVEQLILNWYKTRLDEISPGDKQKDPKTRL
                     QEYLQGRHLPLPSYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQ
                     ALKKLELE"
     gene            complement(8564..9538)
                     /gene="lepB"
                     /locus_tag="MOX77_001383"
     CDS             complement(8564..9538)
                     /gene="lepB"
                     /locus_tag="MOX77_001383"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HCA3356960.1"
                     /translation="MANMFALILVIATLVTGILWCVDKFVFAPKRRARQAAAQTASGD
                     ALDNATLNKVAPKPGWLETGASVFPVLAIVLIVRSFLYEPFQIPSGSMMPTLLIGDFI
                     LVEKFAYGIKDPIYQKTLIETGHPKRGDIVVFKYPEDPKLDYIKRAVGLPGDKITYDP
                     VAKEVTIQPGCSSGQACENALPVTYSNVEPSDFVQTFARRNGGEATSGFFEVPLNETK
                     ENGIRLTERKETLGDVTHRILMVPIAQDQLGMYYQQPGQPLATWVVPPGQYFMMGDNR
                     DNSADSRYWGFVPEANLVGKAVAIWMSFDKQEGEWPTGVRLSRIGGIH"
     gene            complement(9555..11354)
                     /gene="lepA"
                     /locus_tag="MOX77_001384"
     CDS             complement(9555..11354)
                     /gene="lepA"
                     /locus_tag="MOX77_001384"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HCA3356961.1"
                     /translation="MKNIRNFSIIAHIDHGKSTLSDRIIQICGGLSDREMEAQVLDSM
                     DLERERGITIKAQSVTLDFKASDGETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVV
                     DAGQGVEAQTLANCYTAMEMDLEVVPVLNKIDLPAADPERVAEEIEDIVGIDATDAVR
                     CSAKTGVGVTDVLERLVRDIPPPQGDPDGPLQALIIDSWFDNYLGVVSLVRIKNGTMR
                     KGDKIKVMSTGQTYNADRLGIFTPKQVDRTELKCGEVGWLVCAIKDILGAPVGDTLTS
                     ARNPAEKALPGFKKVKPQVYAGLFPVSSDDYESFRDALGKLSLNDASLFYEPESSSAL
                     GFGFRCGFLGLLHMEIIQERLEREYDLDLITTAPTVVYEVETTAKETIYVDSPSKLPP
                     LNNIYELREPIAECHMLLPQAYLGNVITLCIEKRGVQTNMVYHGNQVALTYEIPMAEV
                     VLDFFDRLKSTSRGYASLDYNFKRFQASDMVRVDVLINNERVDALALITHRDNSQSRG
                     RELVEKMKDLIPRQQFDIAIQAAIGTHIIARSTVKQLRKNVLAKCYGGDISRKKKLLQ
                     KQKEGKKRMKQIGNVELPQEAFLAILHVGKDNK"
     gene            complement(11613..12092)
                     /gene="rseC"
                     /locus_tag="MOX77_001385"
     CDS             complement(11613..12092)
                     /gene="rseC"
                     /locus_tag="MOX77_001385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SoxR-reducing system protein RseC"
                     /protein_id="HCA3356962.1"
                     /translation="MIKEWATVISWQNGQAVVSCDVKASCSSCASRAGCGSRVLNKLG
                     PQTTHTIVVPSAEPLAPGQKVELGIAEKSLLGSALLVYMSPLAGLFLCAALFQMLFGS
                     DLAALSGAVLGGVGGFLVARGYSRKLAERDAWQPVILNVALPPDLVRVETTSIETRQ"
     gene            complement(12089..13045)
                     /gene="rseB"
                     /locus_tag="MOX77_001386"
     CDS             complement(12089..13045)
                     /gene="rseB"
                     /locus_tag="MOX77_001386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-E factor regulatory protein RseB"
                     /protein_id="HCA3356963.1"
                     /translation="MKQLWFAMSLVAASLFFSVNASADPASGALLQQMNIASQSLNYE
                     LSFVSITKQGVESLRYRHARLDSRPLAQLLQLDGPRREVVQRGNEISYFEPGLEPFTL
                     NGDYIVDSLPSLIYTDFKRLAPYYDFISVGRTRIADRLCEVIRVVARDGTRYSYIVWM
                     DMDTKLPMRVDLLDRDGETLEQFRVIAFTVSQDIGSTMQALAKANLPPLLSVPGGEKT
                     KFNWNPSWVPQGFSEVSSSRRPLPTMDNLPIESRLYSDGLFSFSVNVNRATQNSSDQM
                     LRTGRRTVYSSVRDNAEITIVGELPPQTAKRIADSIKFRAVQ"
     gene            complement(13045..13695)
                     /gene="rseA"
                     /locus_tag="MOX77_001387"
     CDS             complement(13045..13695)
                     /gene="rseA"
                     /locus_tag="MOX77_001387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma-E factor RseA"
                     /protein_id="HCA3356964.1"
                     /translation="MQKEKLSALMDGETLDSELLKALTHDSEMQKTWESYHLIRDSMR
                     GDTPDVLHFDISARVMAAIENEPVRQVTPLIPEAQPAPQQWQKMPFWKKVRPWAAQLT
                     QMGVAACVSLAVIVGVQHYNGQSETSQQPETPVFNTLPMMGKASPVSLGVPSEAAPVG
                     SQQQQVQEQRRRINAMLQDYELQRRLHSEQLQFEQAQTQQAAVQVPGIQTLGTQSQ"
     gene            complement(13727..14302)
                     /gene="rpoE"
                     /locus_tag="MOX77_001388"
     CDS             complement(13727..14302)
                     /gene="rpoE"
                     /locus_tag="MOX77_001388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005070454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoE"
                     /protein_id="HCA3356965.1"
                     /translation="MSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPSG
                     DVPDVVQESFIKAYRALDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDAIE
                     AENFESGGALKEISNPENLMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIA
                     AIMDCPVGTVRSRIFRAREAIDNKVQPLIRR"
     gene            complement(14299..14463)
                     /gene="rseD"
                     /locus_tag="MOX77_001389"
     CDS             complement(14299..14463)
                     /gene="rseD"
                     /locus_tag="MOX77_001389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rpoE leader peptide RseD"
                     /protein_id="HCA3356966.1"
                     /translation="MEDKTCLQHDKQKQMRNGTLRNIDTLTCCLLIVRLMEWRFESAW
                     KFGLGRHYLG"
     gene            14727..16349
                     /gene="nadB"
                     /locus_tag="MOX77_001390"
     CDS             14727..16349
                     /gene="nadB"
                     /locus_tag="MOX77_001390"
                     /EC_number="1.4.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-aspartate oxidase"
                     /protein_id="HCA3356967.1"
                     /translation="MMTTPELSCDVLIIGSGAAGLSLALRLAEKHKVIVLSKGPVSEG
                     STFYAQGGIAAVFDETDSIASHVEDTLIAGAGICDRHAVEFVASNARTCVQWLIDQGV
                     LFDTHVQPNGKESYHLTREGGHSHRRILHAADATGKEVETTLVSRAQNHPNIQVLERS
                     NAVDLIISDKIGLPGPRRVVGAWIWNRNKEWVETCHAKSVVLATGGASKVYQYTTNPD
                     ISSGDGIAMAWRAGCRVANLEFNQFHPTALYHPQARNFLLTEALRGEGAYLKRPDGSR
                     FMPDVDERGELAPRDIVARAIDHEMKRLGADCMFLDISHKPDDFVRQHFPMIYAKLLD
                     LGMDLTKEPIPIVPAAHYTCGGVVVDDYGRTDVDGLYAIGEVSYTGLHGANRMASNSL
                     LECLVYGWSAAMDIDRRMPSVHSVDVLPAWDESRVENADERVVIQHNWHELRLLMWDY
                     VGIVRTTKRLERALRRITMLQQEIDEYYANFRVSNNLLELRNLVQVAELIVRCAMMRK
                     ESRGLHFTLDYPQQLAESGPSILSPLTPHINR"
     gene            complement(16334..17071)
                     /gene="trmN"
                     /locus_tag="MOX77_001391"
     CDS             complement(16334..17071)
                     /gene="trmN"
                     /locus_tag="MOX77_001391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA(1)(Val)
                     (adenine(37)-N(6))-methyltransferase TrmN"
                     /protein_id="HCA3356968.1"
                     /translation="MSQSGSVLRRNGFTFKQFFVAHDRCAMKVGTDGILLGAWAPVAD
                     VKRILDIGTGSGLLALMLAQRTDDSVPVDAVELDAGAAMQAQENVAHSPWPHRITVHT
                     DDIQRWAPRQTVRFDLIISNPPYYEPGVECSTPQREQARYTATLDHQTLLAIAADCIT
                     EDGFFCVVLPEQIGNAFTQQALNMGWHLRLRTDVAENEARLPHRVLLAFSPQAGECFS
                     DRLVIRGSDQNYSESYTALTQAFYLFM"
     gene            17201..18535
                     /gene="srmB"
                     /locus_tag="MOX77_001392"
     CDS             17201..18535
                     /gene="srmB"
                     /locus_tag="MOX77_001392"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase SrmB"
                     /protein_id="HCA3356969.1"
                     /translation="MTVTTFSELELDESLLDALQDKGFTRPTAIQAAAIPPALDGRDV
                     LGSAPTGTGKTAAYLLPALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKH
                     THLDIATITGGVAYMNHAEVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEAD
                     RMLDMGFAQDIEHIAGETRWRKQTMLFSATLEGDAIKDFAERLLEDPVEVSANPSTRE
                     RKKIHQWYYRADNFEHKVALLKHLLKQDDATRSIVFVRKRERVHELAETLRLAGINNC
                     YLEGEMAQIKRNEGIKRLTDGRVNVLVATDVAARGIDIPDVSHVINFDMPRSGDTYLH
                     RIGRTGRAGRKGTAISLVEAHDHLLLLKIGRYIEEPLKARVIDELRPTTRAPSEKLTG
                     KPSKKVLAKRAEKKKEKEKEKPRVKKRYRDTKNIGKRRKPSGTKMQEQSSEE"
     gene            complement(18582..19450)
                     /locus_tag="MOX77_001393"
                     /pseudo
     CDS             complement(18582..19450)
                     /locus_tag="MOX77_001393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311470.2"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
     gene            19553..20140
                     /gene="eamB"
                     /locus_tag="MOX77_001394"
     CDS             19553..20140
                     /gene="eamB"
                     /locus_tag="MOX77_001394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine/O-acetylserine transporter"
                     /protein_id="HCA3356970.1"
                     /translation="MTPMLLSAFWTYTLITALTPGPNNILALSAATAHGFRQSIRVLA
                     GMSLGFLVVMLLCAGIAFSLAVIDPAIIHLLSWVGAAYILWLAWKIATSPAADEKVRP
                     KPVGFWVSFGLQFVNVKIILYGITALSTFVLPQTQALNWVIGVSILLALIGTFGNVCW
                     ALAGHLFQRAFRHYGRQLNIILALLLVYCAVRIFY"
     gene            complement(20202..20585)
                     /gene="grcA"
                     /locus_tag="MOX77_001395"
     CDS             complement(20202..20585)
                     /gene="grcA"
                     /locus_tag="MOX77_001395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007728348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autonomous glycyl radical cofactor GrcA"
                     /protein_id="HCA3356971.1"
                     /translation="MITGIQITKAANDDLLNSFWLLDSEKGEARCIVAKSGFAEDEVV
                     AVSKLGEIEYREIPMEVKPEVRVEGGQHLNVNVLRRETLEDAVKHPEKYPQLTIRVSG
                     YAVRFNSLTPEQQRDVIARTFTESL"
     gene            20904..21593
                     /gene="ung"
                     /locus_tag="MOX77_001396"
     CDS             20904..21593
                     /gene="ung"
                     /locus_tag="MOX77_001396"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HCA3356972.1"
                     /translation="MATELTWHDVLADEKQQPYFINTLHTVAGERQSGITVYPPQKDV
                     FNAFRFTELGDVKVVILGQDPYHGPGQAHGLAFSVRPGIAPPPSLVNMYKELEASIPG
                     FVRPAHGYLESWARQGVLLLNTVLTVRAGQAHSHASLGWETFTDKVISLINQHREGVV
                     FLLWGSHAQKKGAIIDPQRHHILKAPHPSPLSAHRGFFGCNHFALTNQWLEQHGEKTI
                     DWTPVLPAESE"
     gene            complement(21709..22746)
                     /locus_tag="MOX77_001397"
     CDS             complement(21709..22746)
                     /locus_tag="MOX77_001397"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA/rRNA methyltransferase"
                     /protein_id="HCA3356973.1"
                     /translation="MNDELKNKSGKVKVMYVRSDDDSDKRTHNPRTGKGGGRPAKSRT
                     DGGRRPARDERNNQSRDRKHETSPWRTVSRAPGDETPEKVDHGGISGKSFIDPEVLRR
                     QRAEETRVYGENACQALFQSRPDAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEA
                     ELAKASGTEHHGGVCFLIKKRNGTTVKQWVKQAADQDCVLALEDVANPHNLGGMMRSC
                     AHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITGESIVDVLDDFRQAGYTVVTTS
                     SDRGQALFSTTLPEKMVLVLGREYDYLPEAAREPDDLCVKINGTGNVESLNVSVATGV
                     LLAEWWRQNKA"
     gene            22950..23369
                     /gene="trxC"
                     /locus_tag="MOX77_001398"
     CDS             22950..23369
                     /gene="trxC"
                     /locus_tag="MOX77_001398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin TrxC"
                     /protein_id="HCA3356974.1"
                     /translation="MNTVCTHCQAINRIPGDRLQDAAKCGRCGHELFDGEVINATGET
                     LDKLLKDDLPVVIDFWAPWCGPCRNFAPIFEDVAEERSGKVRFVKVNTEAERELSARF
                     GIRSIPMIMIFKHGQVVDMLNGAVPKAPFDSWLNEAL"
     gene            23442..24122
                     /gene="tapT"
                     /locus_tag="MOX77_001399"
                     /gene_synonym="tuaA"
                     /gene_synonym="yfiP"
     CDS             23442..24122
                     /gene="tapT"
                     /locus_tag="MOX77_001399"
                     /gene_synonym="tuaA"
                     /gene_synonym="yfiP"
                     /EC_number="2.5.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-uridine aminocarboxypropyltransferase"
                     /protein_id="HCA3356975.1"
                     /translation="MTNNAVLQLRAERLARATRPFLARGNRVRRCQRCLLPLKSCLCD
                     TLTPSQAKSRFCLVMFDTEPMKPSNTGRLIADILPDTAAFQWSRTEPPQALLELVQHP
                     DYQPIVVFPASYAGEAREVISTPPAGKPPLFIMLDGTWPEARKMFRKSPYLDHLPVIS
                     VDLSRLSAYRLREIHAEGQYCTAEVAIALLDLAGDPEAATSLGEHFIRFKTRYLAGKT
                     QHPGNVTA"
     gene            24176..26836
                     /gene="pat"
                     /locus_tag="MOX77_001400"
     CDS             24176..26836
                     /gene="pat"
                     /locus_tag="MOX77_001400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein lysine acetyltransferase"
                     /protein_id="HCA3356976.1"
                     /translation="MSQQGLEALLRPKSIAVIGASMKPHRAGYLMMRNLLAGGFNGPV
                     LPVTPAWKAVLGVMAWPDIASLPFTPDLAILCTNASRNLALLDALGAKGCKTCIILSA
                     PTSQHEELLASARHYKMRLLGPNSLGLLAPWQGLNASFSPVPIKQGKLAFISQSAAVS
                     NTILDWAQQREMGFSYFIALGDSLDIDVDELLDYLARDSKTSAILLYLEQLSDARRFV
                     SAARSASRNKPILVIKSGRSPAAQRLLNTSAGMDPAWDAAIQRAGLLRVQDTHELFSA
                     VETLSHMRPLHGDRLMIISNGAAPAALALDELWSRNGKLATLSEETCLQLRQTLPAHI
                     DIANPLDLCDDASSEHYVKTLDILLASQDFDALMVIHSPSAAAPGTESAHALIETIKR
                     HPRGKFVTLLTNWCGEFSSQEARRLFSEAGLPTYRTPEGTITAFMHMVEYRRNQKQLR
                     ETPALPSNLTSNTAEAHNLLQRAIAEGATSLDTHEVQPILHAYGLHTLPTWIASDSAE
                     AVHIAEQIGYPVALKLRSPDIPHKSEVQGVMLYLRTASEVQQAANAIFDRVKMAWPQA
                     RIHGLLVQSMANRAGAQELRVVVEHDPVFGPLIMLGEGGVEWRPEEQAVVALPPLNMN
                     LARYLVIQGIKQRKIRARSALRPLDIVGLSQLLVQVSNLIVDCPEIQRLDIHPLLASA
                     SEFTALDVTLDIAPFDGDNESRLAVRPYPHQLEEWVEMKNGDRCLFRPILPEDEPQLR
                     QFIAQVTKEDLYYRYFSEINEFTHEDLANMTQIDYDREMAFVAVRRMDNAEEILGVTR
                     AISDPDNVDAEFAVLVRSDLKGLGLGRRLMEKLIAYTRDHGLKRLNGITMPNNRGMVA
                     LARKLGFQVDIQLDEGIVGLTLNLAKCDES"
     gene            26951..28306
                     /gene="pssA"
                     /locus_tag="MOX77_001401"
     CDS             26951..28306
                     /gene="pssA"
                     /locus_tag="MOX77_001401"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HCA3356977.1"
                     /translation="MLSKFKRNKHQQHLAQLPKISQSVDDVDFFYTPATFRETLLEKI
                     ASATQRICIVALYLEQDDGGKGILDALYAAKRQRPELDVRVLVDWHRAQRGRIGAAAS
                     NTNADWYCRLAQENPGIDVPVYGVPINTREALGVLHFKGFIIDDSVLYSGASLNDVYL
                     HQHDKYRYDRYQLIRNRQMADIMFDWVTQNLMNGRGVNRLDNTQRPKSPEIKNDIRLY
                     RQELRDASYHFQGDANDEQLSVTPLVGLGKSSLLNKTIFHLMPCAEHKLTICTPYFNL
                     PAVLVRNIIQLLRDGKKVEIIVGDKTANDFYIPEDEPFKIIGALPYLYEINLRRFLSR
                     LQYYVNTDQLVVRLWKDDDNTYHLKGMWVDDKWMLLTGNNLNPRAWRLDLENAILIHD
                     PKQELAPQREKELELIRTHTTIVKHYRDLQSIADYPIKVRKLIRRLRRIRIDRLISRI
                     L"
     gene            28351..28674
                     /locus_tag="MOX77_001402"
     CDS             28351..28674
                     /locus_tag="MOX77_001402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfiM family lipoprotein"
                     /protein_id="HCA3356978.1"
                     /translation="MRVLIPFTVLFLSGCSHLANDHWSGQDKAQHFMASAMLSAAGNE
                     YARHQGVSPDRSAAIGLMFSLSLGASKELWDSRPEGSGWSWKDFVWDVAGATTGYAIW
                     QMARY"
     gene            complement(28671..29972)
                     /locus_tag="MOX77_001403"
     CDS             complement(28671..29972)
                     /locus_tag="MOX77_001403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3356979.1"
                     /translation="MAEIIQRIDKNNAEAPEMRRHIWAIVGASSGNLVEWFDFYVYSF
                     CSLYFAHIFFPSSNTTTQLLQTAGVFAAGFLMRSIGGWLFGRIADRRGRKASMLISVC
                     MMCMGSLVIACLPGYDTIGTWAPALLLIARLFQGLSVGGEYGTSATYMSEVALEGRKG
                     FFASFQYVTLIGGQLLALLVVVILQQVLEDAELRAWGWRIPFALGAVLAVVALWLRRQ
                     LDETSKHETRALKEAGSLKGLWRNRKAFLMVLGFTAAGSLCFYTFTTYMQKYLVNTAG
                     MHANVASGIMTAALCVFMLVQPLFGALSDKIGRRTSMLCFGALATLFTVPILSALQNV
                     TSPYAAFALVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEY
                     VALSLKSVGMESSFFWYVTAMAVLAFLVSLMLHRKGKGLRL"
     gene            complement(30076..30531)
                     /locus_tag="MOX77_001404"
     CDS             complement(30076..30531)
                     /locus_tag="MOX77_001404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4385 domain-containing protein"
                     /protein_id="HCA3356980.1"
                     /translation="MAIKPFNYQQDFSSIDFRQQPELYQVGRGEQGGLLVEPYKSEIL
                     PFWRYKDEASAMKSAEQIYQLFEAYRQQDDFVGMDMARKFIQMGYTRARRYANYKGGK
                     KYAEDGSLNTRGNDPIKAAAATVFKGWWDKIRQDEDYLKRKRQHQARWG"
BASE COUNT         7493 a         8461 c         7702 g         7255 t
ORIGIN      
        1 ggggcattct gaggcatcca gtacgccaag ccgaccactg gtgcccgccc ccatatagat
       61 gatacgtccg ccagacttca gcgccgccgc agcagcatcc accgcacgcg caacgtcagg
      121 cagagtggct tttactgctt ccgctaccag cgtatcctgt tcattaaaac gcttaactaa
      181 ttcaggagta gacaacgcat ccagatccat cgtttgcggg ttacgggttt cagacactaa
      241 ggtaccaaga ttcatttttg tccctctgga atttttaatt cataataagc gtccatgatg
      301 gaatagaata ttcccccagg cgagtgaaat ttcgttttgt cgtcgccatc acgtttcgca
      361 ggagctgccc atgaactgtt tgattcgtat tcgccagcgt tatccggatc tcgcgcaaag
      421 cgacaggaaa ctggcggatt atctgctcgc gcaaccggat acggcgcgac atctgagctc
      481 gcagcaactg gcggccgaag cgggcgtcag ccaatccagc gtagtcaagt tcgcgcaaaa
      541 actggggttt aaagggtttc cggcgttgaa actggctatc agcgaagcgt tggccagcaa
      601 tcctaatccg cattccgttc ccgttcataa ccagattcgc ggcgacgatc cgatgcgcct
      661 ggtcggggaa aaattaatta aagagaatgt ggcggcgatg cacgccacgc tggacgttaa
      721 cagtgaagaa aagctgttag aaagcgtcac gatgctgcgc cacgcccgcc gtattgtgat
      781 caccggaatt ggcgcctctg ggctggtggc gcaaaatttt gcctggaagc tactgaagat
      841 tggcattaac gcggtggttg agcgcgatat gcacgccctg ctggcgacgg tgcaggcgct
      901 ggcgccggag gatctgctgc tggcgatctc ttattccggg gagcggcgcg agctgaacct
      961 ggcggcggac gaaacattac gcgcaggcgc gaaaatcctg gccattaccg gtttttctcc
     1021 caacgccttg cagcagcgcg ccacccgctg tctgtatacg attgccgaag agcaggcgac
     1081 gcgtagcgcc gctatctcct cgacacatgc gcaaatgatg ttgaccgact tactgtttat
     1141 ggcgctggta caacaggatt tagagcgggc gccggagcgt attcgccata gcgaggcgct
     1201 ggtaaaaaaa ctggtttgaa aatggctctt ccgcctcatg cagaagagct atcaagttta
     1261 ttgcgcttct ttagcgtgaa tcaattgcgt caggagtgtg ttaaccggta cggcaatatt
     1321 gttctgagcg ccgattcgcg caatcgcacc atttaaatag tcgatttcgg tcagtcggcc
     1381 tttatgtaaa tcctgatgca tagaaggata gtggtggccg ctctcacgcg gatcgaacac
     1441 tttcttcacc gtattcatca ccatttgctc agtcaacgga atattctggc tggcagcaac
     1501 taacacaaac tcatcaacta ccgcttgcgc taaatctaaa gcaccaggcc gctgaccaaa
     1561 tccgccgaca ttacaatcca gtaacgcgca ataggtgttc attacgctat taaaggctgc
     1621 tttcttccag atcgataata atacgtcagg gcttatttca gcattcaatc cagcactatt
     1681 aagggtggca atgaccttag cctcttgagc cgaatcttgg ctggctatcg gctgcagttc
     1741 aatcgttccg gtaccggtgg ccataatatg cccagccccc tccagttcgc tggaccataa
     1801 cgtcacaccc gcatagattt tctgccgatc gacatatttc tccagggttt cgatatttcc
     1861 caggccgtta gataaaatca tcacgacctt cgcggctggc agcagcggct taatacgctg
     1921 taacatgcta tccaactgca tggctttggt aaacagaata accagctcaa actccccctg
     1981 ggattcatca gccaacatag cagggatggg gtaatacttc tgagtcgttt ccgtttcgac
     2041 aaacaacccc ttgctacgaa tagcgtcgac atgctcctgc cagccatcaa taagcgtcac
     2101 gtcgtgcccg gcctccagca gcatatagcc aaaacgacat cccatagcgc ctgcacctgc
     2161 gattgcaatt ttcattttta tttccttatt atctgattaa tgaattttgg ctaaaaccgt
     2221 tgcgacatat tttttcgtta tcagggtcaa cacgactcca ataagcaata gcaccgttgt
     2281 caaaataaat actgtattgt agcttccggt atattttgca atagcggacg tgacgtaagg
     2341 agcaataacc gcaccgacgg caaaaccaaa atacataaag ccgtagttta gtccctggtt
     2401 acgcatacca aaattctggc tggtcaagcc aaggaagata actaatatac cggcataagc
     2461 aaagcccacg cccagagcgc tgaaatagaa taccgaagta ttaccgttga agaacaacag
     2521 cagcagcata cagacgcagg taaaaagata aacaataacc agcgtattat agccgcctaa
     2581 tttatcggtt aaccctcccc agaacaggcg accgatcgag ttaaatatcg agaccaggct
     2641 aacgactaat gcaccggaca gtaaaccgta ctgcgtcata ccaatttgcg cagaacttga
     2701 gctaattacc atcccagaga acacgcccag cgccagaatc ataaacagca gccagaagcg
     2761 cagatctttc agcatgtgcc gatagtcttt atccagtggc gaggctttaa ttcctccgct
     2821 atcttttgct ggcgcgctac gaataaagaa ctggacgata aaaataacca ccagataaac
     2881 aatacccaga tataacaacg cccgactaac atcgtgagtt tgcgccataa aatattcggc
     2941 caggcgggtg caaagtagcg tcccgacgcc aacacccgcc agtacgatac cgctggcaag
     3001 accgcgacgg tcagggaaaa atttcagaat attattaaga ttacccgtaa aagccaggcc
     3061 cgatcccaac ccggcaatga cgccgtaggt taaaaacagc atgggcaaat tatccacaaa
     3121 cccggacaag ataaaaccta aagaaaacag gataccgccg ataactatcg cctgctttcc
     3181 tttaccattg tcgatcattc tcccgcccca aatcatcggt aaaggaatga tccccatatt
     3241 gatagagaat gctaacgccg gcgtagccgg atcccagtga tattgcgcca tgagtggtgt
     3301 tttgaaatag ctaaatgcgt agacgccccc gagcacaaaa ttgatgcaca cgtgagcggc
     3361 aagcattccc cagcggttga ttgatgccga cataattttc cctttttaaa atgcactgat
     3421 cacagtttaa aaaaagcaaa ataggcaaac aatttggtat tttttataat cgttataaca
     3481 aaacccaatc gattggcatt aaattttaat gaatatcaaa caactacact ccttcctgat
     3541 attgtgtgat gaattacatt atggtcgggc agccagtcgc ctatttatca ctcagccatc
     3601 attaagtcag caaatcaaac aacttgagtc atcacttaaa acaatattat ttaagcgaaa
     3661 aggcagagga attaaattaa caaaagcagg cattattttg caacgacacg ctaacaaaat
     3721 aatgctggat ttaaaaaatg ccgaaaatga acttcttccc tatcaggatc aacagcgcga
     3781 tactatttca atcggggtgt caggcagcta cctggtcctg cccgcttttc gcaactttat
     3841 ggcgcaccat ccggaaatat ctttaaatgt taaagagttc tcaactgagc aaaccattaa
     3901 aaagctgacg gatagcgccg ttgatattgg cattgtttat cgaacagcgc tccctgccca
     3961 gctaagctcg accatgctgt ttgaagatga aattatcgct gcaatcccac tttctcatcc
     4021 tctggcgaca cgcgaacgtc tgcatctaaa agatttaaac gaccagccca ttatcgtgct
     4081 taatgactct ctgctattaa gagggatcat caccacagaa tttaataacc gcaaagtcgt
     4141 tcctaacgtc atctgcgaac tggataacca ctactcatgc cttgagtatg ccgaagcgca
     4201 gattggcatc gcatttatta cccgctcgct aacccattta tcgacaccca aaaatgttcg
     4261 cctggtttca ctgggcatcc ccgcattctt tattcctgtc atgctggtgc acagtaatga
     4321 cctttcactg gataacgcaa ccatctgcct gctcaagcag atcaaaaatt tttacactgt
     4381 agataacaaa tcagcgccag aaaagagctg gcccgagtag aaaataggcg tataatgccc
     4441 gcccgatttg tgttgtttct gagaatttcc tgatggcgct gttaatcacc aaaaaatgta
     4501 tcaattgcga tatgtgcgag ccggagtgcc cgaatgaggc gatttcaatg ggcgacagca
     4561 tttatgagat taacagcgac aaatgcaccg agtgtgtagg ccattacgaa acgccgacct
     4621 gtcagaaagt ctgcccgatc cccaatacga ttttgcagga tcccgcccat gtcgaaaccg
     4681 aagaacagtt gtgggataag tttgttctga tgcatcacgc agataaattg taagcgggtt
     4741 aacgcacttc caacgcaaca atgcctgatg gcgctatgct tatcaggccg gcaatatatc
     4801 ggcctgtagg tcagataacg tgtttacgcc gccatccggc aaatctaact ttccagaatg
     4861 accgtagcgc aggcgtaatg gcgttcatcg gccaacgtga catgcatgtg cgccacaccg
     4921 agtttttccg ccagcgttaa cgcctcgccc cacagccgca aacgtggttt tcccagctca
     4981 tcgttaaaca cttcgaactg attaaacgcc agaccgttgc ggatgccggt gccaaaagct
     5041 ttcgctgccg cctctttgac cgcaaaacgc ttggcgagaa aacgcaccgg ctgctgatgc
     5101 gtctcccaga tagcccactc gttgtcactg agcacacgcc ttgccagacg ttcgccggaa
     5161 cgggagatca ctgcctcaat gcgggcaatc tctacaatat ccgttcccag gccgagaatc
     5221 gccattagcc gcgcgcttcc agcatcaaac gtttcatttc agccaccgcc tctttcagcc
     5281 ccgtcatcac cgcccgacca ataatggcat gaccgatatt gagctcgtgc atttccggca
     5341 gtgcggcaat agctttgacg ttatggtagg tcaggccatg acccgcattt acttttagcc
     5401 ccagacgggc cgccagggtc gcggcgctgg caatacgcgc cagctctttt gcctgttccg
     5461 catcggtttc tgcgttggca tagcagccgg tatggatttc gataaacggc gcgccgactt
     5521 ccgccgccgc gttgatttgc ctttcatcgg catcgataaa gagcgaaacc tggatgccag
     5581 ccgccgctag gcgcgcacag gcatcacgca ttttatcgcg ctgtccggcc acatccaggc
     5641 cgccttcggt ggtgacttcc tggcgttttt ccggcaccag acaacagaaa tgcggcctgg
     5701 tttctacggc gatcgccagc atctcttcgg tcaccgccat ctccagattc atacgcgtat
     5761 gcagcgtctg acgcagaatg cgcacatcgc gatcggtaat gtggcgacga tcttcgcgca
     5821 ggtgtacggt aatgccgtcc gcgcctgcct gttcagcaat aaacgccgcc tgtaccggat
     5881 ccggatagtc ggtgccgcgc gcattacgta acgtggcaat gtggtcaata ttgacgccta
     5941 acagtaattc agccatgaca atcctcgtta atctttcttc gtttttactg tgcgtttggg
     6001 cataaattgc cggaacagct cccggctttt taacggtttt cccccaagat acggctttaa
     6061 tgccatacgg gtaaagcgtt tagcggcacg cagggtatct acatccggaa attcccgcgc
     6121 ctccagcgct ttcaggtgcc gtccggtaaa ggtgttgtta tcgatgacga cgctggcgaa
     6181 aaagcctttt tcttcgcggt aacggtaggt catggtgtca tccacccgtt cgccgctgcc
     6241 tgcacagtgg gtgaaattga cgccataccc cagatgtccc agcaacgcca gttcgaaacg
     6301 tcgcaacgcc ggttcaggcg agccggtggt tcccgccagc gcctgaatac agttcagata
     6361 atcaaaaaag agttcggaga agcgcgtttc atattccagt acgcgagaga ggagttcgtt
     6421 gatatacagg ccgctataga gcgtaatacc gcttaacggc agcgccagag aaactgcctc
     6481 ggcgctgcgc agggttttca cctcgccgcg tccgctgtag cgtagcaata acggcgtaaa
     6541 aggctgcaac gcgcctttca gattggaacg tttagatcgc gcgcctttgg cgacaaggcg
     6601 cacgcgcccc gattcttccg tgaagacgtc cagcatcagg ctggtttcgc tccaggggcg
     6661 actgtgcagg acaaatgcgc gctgccaccc ttccacgctg tgttaactca cagatcgtct
     6721 acgtaaccga gactgcgcag agcgcgttcg tcatcggccc agccggattt cactttcacc
     6781 cacagttcca ggtgtaccgg cgcttcaaac atctcctgca tgtctttacg cgcttcaata
     6841 ccaatggttt tgattttggc gcctttgttg ccaatcacca tcttcttctg cccttcgcgc
     6901 tcgacgagga tcagcccgtt gatatcatag ccgccgcgtt cgttggtaac aaaacgttca
     6961 atctcaacgg taacggaata cggcagctcg gcgccgagaa aacgcatcag cttttcacga
     7021 atgatttcag acgccataaa gcgctgagag cgatcggtga tataatcttc cgggaagtgg
     7081 tgaatcgctt ccggtaaatg tttacgcacg atactggcaa tggtatcgac gttcataccc
     7141 gtttcagcag agatggggac gatatcaaga aagttcatct ggcttgccag gaactggagg
     7201 tgcggcagca aatcggcttt ttcctgcacg ttatccacct tgttaacggc gagaataacc
     7261 ggcgctttgc catcgcgcag tttgttcagg accatttcgt cgtccggcgt ccaacgggtg
     7321 ccttctacaa cgaaaatcac cagctcaacg tcgccaatcg aactgctcgc cgccttattc
     7381 atcaaacggt taatggcgcg cttttcttcc atatgcagtc ccggggtatc gacatagatt
     7441 gcctgatacg ggccttcggt atgaataccg acaatgcggt ggcgcgtggt ctgcgcttta
     7501 cgggaagtga tcgaaatctt ctgcccgagc agtttgttca gcaaggtgga tttgccaacg
     7561 ttcggacgtc cgacgatggc aataaatccg cagtaagttt tgtcggtgct cattccaact
     7621 ccagtttttt cagcgcctgt tcggcggcag cctgctccgc cttacgacgg ctggaacccg
     7681 tgccaaccac cggttcgctc aggccgctga cctggcagtg gatagtaaat tcctgatcgt
     7741 gcgcctcgcc gcgtacctgc acaaccaggt aagatggcag cggcagatgg cgaccctgca
     7801 aatactcctg caagcgcgtt ttaggatctt tttgtttatc gcccggactt atctcatcca
     7861 gacgggtttt ataccagtta aggattaact gctcgacggt ctggatattg ctatcgagaa
     7921 atactccgcc gattaacgct tccacggtgt ccgccagaat ggactcccga cgaaatccgc
     7981 cgctttttaa ttcgcccggc cctaaacgca ggcactcgcc taaatcaaat tcacgggcta
     8041 attccgccag cgtattacca cgtaccaacg tggcgcgcat acggctcata tctccctcat
     8101 ccacccgtgg aaaacggtga taaagcgcgt tagcgataac gaagctcagg attgaatcgc
     8161 ctaaaaactc caggcgttcg ttatgtttac tgctggcgct gcggtgagtt aatgcctgct
     8221 gcaacagctc ctgatgatta aaagtgtagc ccagcttccg ttgaagccga ttaattacga
     8281 tggggttcat gcgataccaa taaatgaatg cgtcaacaat ccagcacacg aaacagacct
     8341 gatacacgtc atctgtcctg ccgcatcgct gcagcggaaa gaaggttgtc tataaccaac
     8401 gctgtttcgt gtgccgtggc gaccaaacgg cgccaaccta aaacttcggg ggaatattct
     8461 atacacaacg acaggggatg tcgttagtct gagggaattt atccaggaaa taattcacgc
     8521 tgccgctaaa aagacgacag cgtgaacgat catttcgcca cagttagtga ataccgccga
     8581 tacgactcag gcgtacgcct gtcggccact ccccttcctg cttgtcaaag ctcatccaga
     8641 tagcgaccgc tttaccgacc agattcgctt ccggaacaaa tccccagtaa cgactatccg
     8701 cgctgttatc gcggttgtcg cccatcatga aatattgccc cggcggtaca acccaggtcg
     8761 ccagcggttg tcctggctgt tggtaataca tgcccaactg atcctgggct atcggcacca
     8821 tcaggatgcg gtgggtcaca tcgcctaacg tctctttacg ttcggtcagg cgaatgccgt
     8881 tttcttttgt ctcgtttagc ggaacctcaa agaaaccgct ggtcgcttct ccgccgttac
     8941 ggcgggcaaa ggtctgtaca aaatcgctcg gctcaacgtt agagtaggta accggcagcg
     9001 cattttcgca cgcctgaccg gagctacagc caggctgaat cgtcacctct ttcgcaaccg
     9061 gatcataagt gattttatcg cccggcaaac cgacggcgcg tttgatgtaa tctaacttag
     9121 gatcttccgg atatttaaat accacaatat ccccgcgctt tggatgaccg gtttcaatca
     9181 gggttttctg gtagatcgga tctttaatgc cgtaggcaaa tttttccacc agaataaaat
     9241 cgccgataag cagtgtcggc atcattgagc ctgacgggat ctgaaagggt tcataaagaa
     9301 atgaacgaac gatcagaacg atcgccagaa ccgggaaaac cgacgccccg gtctccagcc
     9361 agcccggctt aggcgccact ttattgagcg tagcgttatc cagcgcatct cccgacgccg
     9421 tttgcgcggc agcctggcgc gcccgacgtt ttggcgcgaa aacaaactta tcaacgcacc
     9481 ataaaatgcc cgtcaccagt gtggctatca ccagaatcag ggcaaacatg ttcgccatgc
     9541 caactcctta gggattattt attgtcttta ccgacatgca gaatggcgag gaacgcctcc
     9601 tgaggcagct cgacgttacc gatctgcttc atgcgtttct taccttcttt ctgtttctgc
     9661 agcagttttt tcttacgact gatatcgccg ccgtagcact tcgccagcac gtttttacgt
     9721 aactgtttta ccgtcgaacg ggcaataata tgcgtaccaa tcgccgcctg aatcgcgata
     9781 tcaaactgct ggcgtggaat caaatctttc attttctcca ccagctcgcg accacggctt
     9841 tgcgagttat cacggtgcgt gatcagcgcc agcgcatcga cacgctcgtt gttgattaac
     9901 acatcaacac gcaccatatc ggaagcctgg aagcgcttga agttataatc cagagacgca
     9961 tagccgcgcg acgttgattt cagacggtca aagaagtcga gcaccacttc cgccatcggg
    10021 atttcatagg tcaacgcaac ctggttaccg tgatacacca tgttagtttg tacgccgcgt
    10081 ttctcaatac acagcgtaat aacgttacct aaataggctt gtggtaacag catatgacat
    10141 tcggcgatag gctcgcgcag ttcataaatg ttattcaacg gcggcagctt ggaggggcta
    10201 tcaacataga tagtctcttt cgccgttgtt tctacttcat aaaccacggt cggcgcagtg
    10261 gtgatcagat ccagatcgta ttcgcgttcc agacgctcct gaatgatctc catgtgcaac
    10321 aggccgagga agccgcagcg gaaaccaaag cccagcgccg aggagctttc cggttcataa
    10381 aacagtgagg catcgttcag gctcagcttg ccgagcgcgt cgcggaaact ttcataatcg
    10441 tcggagctga ccgggaacag acctgcatag acctgcggtt tcaccttctt aaagcccggc
    10501 aacgcttttt cagctgggtt acgcgctgag gttaaggtat cgccaaccgg cgcgccgagg
    10561 atatctttaa tggcgcagac cagccagcct acttcgccgc acttcagctc ggtacgatca
    10621 acctgtttcg gcgtgaagat ccccaggcgg tcagcgttgt aggtctgccc ggtgctcatc
    10681 actttaattt tgtcgccttt acgcatggtg ccgtttttaa tacgcaccag ggataccacg
    10741 cccaggtagt tatcgaacca ggagtcaata atcagcgcct gcagcgggcc gtccggatcg
    10801 ccttgcggcg gcgggatatc gcgcaccagg cgttccagaa cgtccgtcac gccgacaccc
    10861 gttttggcgg agcagcgtac cgcgtccgtc gcatcgatgc cgacaatgtc ttcgatttct
    10921 tccgccacac gctccggatc ggcggccggc aggtcaatct tgttaagcac cggcaccact
    10981 tcaagatcca tttccatcgc ggtgtagcag ttcgccaacg tttgcgcttc tacgccctgg
    11041 ccggcatcca ccaccagcag cgcgccctcg caggcggcta acgaacggga aacttcatag
    11101 gaaaagtcaa cgtgtcccgg cgtgtcgata aagttcagtt gataagtttc accatcagac
    11161 gctttaaaat ccagcgtcac actctgggct ttaatagtaa taccgcgctc acgctcaaga
    11221 tccatcgaat caagtacctg agcttccatt tcacggtcag acaggccacc gcagatttgg
    11281 ataatacggt cagacagcgt cgatttaccg tggtcaatgt gagcaatgat cgaaaagtta
    11341 cgtatgttct tcatagagat aaattattat gccttacgcc tggttgacca gactttagag
    11401 gtcgctgttc tgagcttaac gtctgtttta actgaaacgc cgcattctac actacaacgc
    11461 taaggcgagg aaatgttcat agtgtaagga gagcgggaac tggaaaacgc ctcgcttttt
    11521 tcctgtaaaa caccgcaacg caggaaaagc gcatgcttat cgggacaaca acccaacgcg
    11581 gcaggtgtac catgtaccat tgggcaaaac gtttactggc gcgtttcgat tgaggtagtt
    11641 tcgacgcgga caaggtcagg cgggagggca acgtttaaaa tcacgggctg ccaggcgtcg
    11701 cgctccgcca gttttcggga atagccgcgg gcaaccagaa aaccgcccac tccgcccagc
    11761 acggccccgc ttaatgcggc aaggtcagat ccaaacagca tctgaaaaag cgccgcacaa
    11821 agaaatagcc ccgctaaagg cgacatatag accagcaacg ccgaacctaa aaggcttttt
    11881 tcggcgatgc ccaactcgac tttctgcccc ggagccagcg gctccgcgct tggcacaaca
    11941 atggtatgcg tggtttgcgg ccctaattta ttcagcacgc gactgccgca tcccgcacgg
    12001 gaggcgcagc tgctgcatga cgctttaacg tcgcagctca ccaccgcctg accattctgc
    12061 caggagataa cggttgccca ctctttaatc attgtactgc cctgaatttg atactgtcgg
    12121 caatgcgctt cgccgtttgc ggcggaagct ctccgacaat ggtgatttcc gcgttgtcgc
    12181 gaacgctgct ataaaccgtt cggcgcccgg tgcgcagcat ctgatcgctg ctgttttgcg
    12241 tcgcccggtt cacattgacg gaaaagctaa acagaccgtc agaataaagc cgcgattcga
    12301 taggcaggtt atccatcgtc ggcaacggac gacggctgct ggaaacttcg ctaaagcctt
    12361 gcggcaccca ggatggattc cagttaaatt tcgttttttc gccaccggga acagaaagca
    12421 gcggcggcag attcgccttc gccagcgcct gcatggtgct gccgatatcc tgactcaccg
    12481 tgaacgcaat aacgcggaac tgctccagcg tctcgccgtc gcgatccagc agatcaacgc
    12541 gcatcggtag tttggtgtcc atgtccatcc agacgatata gctgtaacgc gtaccatcgc
    12601 gcgccacaac gcggataact tcgcataatc tgtctgcgat acgggtgcgt ccgacggaaa
    12661 taaagtcgta gtaaggcgcc agacgcttga aatcggtgta aatcagggaa ggcagagaat
    12721 cgacaatata atcaccgttc agggtgaacg gctcaaggcc cggttcaaaa taactgattt
    12781 cattaccacg ctgtacgacc tcccggcggg gaccgtccaa ctgtagcaat tgcgcaagcg
    12841 ggcgactatc caggcgtgcg tgtcgataac gcagagattc aacgccttgt ttcgtgatgc
    12901 tgacgaatga cagctcgtaa ttcagtgact gactggcgat gttcatctgc tgcaataacg
    12961 ccccggacgc agggtcggcc gaggcgttta ctgagaagaa caggctagcc gccacaaggg
    13021 acatggcaaa ccaaagttgc ttcattactg cgattgcgtt cctaaagttt ggattcctgg
    13081 cacctgtacc gcggcttgct gggtttgcgc ctgctcaaac tgaagctgtt cggagtgcag
    13141 tcggcgctgc agttcatagt cctgcaacat ggcattaatg cgacgacgct gctcctgtac
    13201 ctgctgttgc tgactgccga caggcgctgc ttcagaaggc actcccagac ttaccgggct
    13261 ggctttcccc atcataggca gggtattgaa aaccggcgtt tcaggttgtt gggatgtttc
    13321 agattgccca ttatagtgct ggacaccgac gataactgca agtgaaacgc acgccgccac
    13381 gcccatttgg gtaagctgcg ccgcccacgg acgcactttt ttccagaacg gcattttctg
    13441 ccattgctgc ggagcgggtt gggcctcagg gattaatggc gtcacctgac gtactggctc
    13501 gttttcaata gcggccatca cgcgggcgga tatatcgaaa tggagaacgt caggcgtatc
    13561 cccccgcatt gaatcgcgga tcaggtgata actctcccag gttttctgca tttccgagtc
    13621 gtgcgtaagc gctttgagca gctcactatc caacgtttcg ccatccatca aagcggaaag
    13681 tttttctttc tgcatgccta ataccttttc cagtatcccg ctatcgtcaa cgcctgataa
    13741 gcggttgaac tttattatca atagcttccc gcgcccggaa gatacgtgaa cgcaccgtcc
    13801 ccaccgggca atccatgata gccgctatct cttcatagct caggccatcc agctcccgta
    13861 aggtgattgc catacgtaaa tcttccggga gggactcaat agttcggaaa actatctgtc
    13921 tcagttcttc tgacaacatt aagttctcag ggttcgaaat ttctttcagc gcgccgccgc
    13981 tttcaaagtt ttctgcttca atcgcgtcta catcactgga aggcggacga cgcccctgcg
    14041 caaccaggta gttcttcgcg gtattgaccg caatacgata caaccaggta taaaaagcgc
    14101 tatccccccg gaaagaatcc agcgcgcgat aggccttaat aaatgattcc tgtacgacat
    14161 cgggaacgtc gcccgatggc acatagcggg aaaccagact cgccacttta tgctggtagc
    14221 gcactaccag taagttaaag gctttctgat ctcccttctg gacccgttca accaggacct
    14281 ggtccgttaa ctgctcgctc atccgaggta atgtctcccc aaaccaaatt tccacgcgct
    14341 ttcgaaacgc cactccataa gccgcactat gagcaagcaa caggttagag tgtctatgtt
    14401 tcgtaaagtt ccgttacgca tttgtttttg tttgtcatgt tgtagacagg tcttatcttc
    14461 cattataagt ctacagatgc tgaacaacgc actatctgta cagaaatgcc catttcgtcg
    14521 tttgcagagt aacctaacag catctttatt tcactacaaa atccgacgct aacaccctgc
    14581 cctataaaat attttttgcc gtttatctct cgccgtattt ttattttatg tttaataagc
    14641 acaacacttt tgaaatcata acgtgctttt tagcgccata tagtgctaat ctgccgcaac
    14701 catgtttagt aaattaaaca agaaccatga tgacaactcc tgaactgtcc tgtgatgtgt
    14761 taattatcgg cagcggcgcg gccggactct cgctggcgct gcgtctggct gaaaagcata
    14821 aggttatcgt cctgagtaaa gggccggtga gcgagggctc cacgttttat gcacagggcg
    14881 gtattgccgc cgtgtttgat gaaaccgaca gcattgcatc gcatgtcgaa gatacgctga
    14941 ttgccggcgc cggaatttgc gatcgccacg cggtggagtt tgtcgccagc aacgctcgta
    15001 cctgcgtgca gtggcttatc gatcagggcg tcctgtttga tacgcatgtc cagccaaacg
    15061 gcaaggagag ctatcatctc acgcgtgaag gcggccatag ccatcgccgt atccttcatg
    15121 ccgccgacgc taccggaaag gaagtcgaaa ccacgttggt cagtcgggca caaaatcatc
    15181 ctaatattca ggtgctggaa cgcagcaacg ccgttgattt aattatctcc gataaaatag
    15241 gtctgccggg gcctcgccgg gtcgtcggcg cctggatctg gaatcgcaat aaagagtggg
    15301 ttgaaacctg tcatgcgaag tcggtggtgc tggcgaccgg cggcgcctca aaggtgtatc
    15361 aatataccac taacccggat atttcctccg gtgacggtat cgcgatggcc tggcgcgcgg
    15421 gctgtcgggt cgctaatctg gaatttaacc agtttcatcc cactgccctt tatcacccgc
    15481 aggcgcgtaa ttttctcctt accgaagcgc tgcgcggcga aggcgcatac cttaaacgtc
    15541 cggacggttc acggtttatg ccggacgttg acgaacgcgg cgaactggcg ccgcgcgata
    15601 ttgtcgcccg cgctattgat catgagatga aacgactcgg cgcagactgt atgtttctcg
    15661 atatcagcca caagcctgac gattttgtcc gccagcactt cccgatgatc tatgcgaaac
    15721 tgctcgattt ggggatggat ttaaccaaag aaccgattcc cattgttcct gccgcgcact
    15781 atacctgcgg cggcgtggtc gtcgatgatt atggtcgtac cgatgtagac ggcttatatg
    15841 ccattggcga agtcagttac accggtctgc acggcgctaa ccgtatggcg tccaactcgt
    15901 tactggaatg cttagtgtac ggctggtccg cggcaatgga tatcgacagg cgaatgcctt
    15961 ctgtccacag cgttgacgtc cttcccgcct gggatgaaag ccgcgtggag aacgccgatg
    16021 agcgggtggt gattcagcat aactggcacg aactgcgtct gctgatgtgg gactatgtgg
    16081 ggattgtgcg cacgacgaaa cggctggagc gcgccctacg gcgtattact atgttgcaac
    16141 aagagattga cgaatattac gccaactttc gcgtctcgaa taatttactg gagctgcgca
    16201 atctggtgca agtggccgaa ctgattgtgc gttgcgcgat gatgcgtaaa gagagccggg
    16261 ggctgcactt tacgctggat tatccgcaac aactggctga atcaggccca tcgatccttt
    16321 cgccgttaac gcctcacata aacagataaa atgcctgggt cagcgccgta taactttcag
    16381 aataattctg gtctgacccg cgaattacta atctgtcgct aaagcactcc ccggcttgcg
    16441 gggagaatgc gagcaaaacc cggtgcggca agcgcgcttc gttttccgca acgtcagtac
    16501 gtaaccgcaa atgccatccc atgttgagcg cttgctgcgt aaaagcgtta cctatttgtt
    16561 ccggcaagac tacgcaaaaa aagccatctt cggtaataca atccgccgca atagccaata
    16621 acgtctggtg atccagcgta gcggtgtaac gcgcctgctc ccgctgcggc gtggagcatt
    16681 ccacaccggg ttcgtaataa ggcgggttgc tgataataag atcaaagcgt accgtctggc
    16741 gaggcgccca acgctgaata tcgtcagtat gcaccgttat tcgatgcggc catggagagt
    16801 gagccacgtt ttcctgcgct tgcatggcag ccccggcatc cagttccacg gcgtcaacag
    16861 gcacactgtc atccgtccgc tgcgccagca ttaacgccag cagaccgctt ccagtaccga
    16921 tatccagaat tcgctttaca tccgcgaccg gcgcccacgc cccgagtaaa ataccgtcag
    16981 ttcccacttt catcgcacac cgatcgtgtg cgacaaaaaa ctgtttaaac gtaaatccgt
    17041 tacgacgaag aacggagcca gactgagaca tgtaaaaaca accttgcaaa aaacggcgac
    17101 agcgccgagt gaaaacaata cctgagaagg gatatccata caaacagatg aagattgcgg
    17161 ccgtaacgtc tataatcagc gccccacaca gaggtagaac atgactgtaa cgactttttc
    17221 cgaacttgaa ctcgacgaaa gcctgctgga tgccctccag gataaaggtt tcactcgccc
    17281 gaccgccatt caggctgccg ccattccgcc tgcgctcgat ggccgtgatg tactcggttc
    17341 tgcgccgaca ggcaccggaa aaacggcggc atatctgctg ccggcgttgc agcacctgct
    17401 cgactttccg cgtaaaaaat cggggccgcc gcgcattctg atcctgacgc caacccgcga
    17461 actggcaatg caggttgccg atcacgctcg tgaactggct aagcatactc atctggatat
    17521 cgccacgatt accggcggcg tggcctatat gaaccatgct gaagtgttta gcgaaaacca
    17581 ggatatcgtg gtcgccacga cgggccgtct gctgcaatat ataaaagaag agaattttga
    17641 ctgccgggcg gttgaaacac tgatccttga cgaagctgac cggatgctcg acatgggctt
    17701 cgctcaggac attgaacata tcgctggtga gacccgctgg cgtaaacaga cgatgctgtt
    17761 ctccgccacg ctggaaggcg atgcgattaa agattttgcc gagcgcctgc tggaagaccc
    17821 ggttgaggtt tccgccaatc cgtcaacccg cgagcgcaag aaaattcacc agtggtacta
    17881 ccgtgccgac aatttcgaac ataaagttgc gctgttgaag cacctgctaa aacaagacga
    17941 tgcaacccgt tctatcgtgt ttgtacgtaa acgtgaacgc gtccatgaac tggctgaaac
    18001 gctgcgtctg gcagggatca acaattgcta tcttgaaggc gagatggcgc agatcaaacg
    18061 taacgagggt attaagcgtc tcaccgacgg tcgcgttaac gtgctggtcg cgaccgacgt
    18121 cgcggcacgc gggattgata ttcctgacgt cagccacgtc attaacttcg acatgccgcg
    18181 cagtggcgat acctatctgc atcgcattgg tcgtacaggc cgtgcgggtc gcaaaggcac
    18241 tgcaatctcg ctggttgaag cccacgacca tctgttgctg ctgaaaatcg gtcgctacat
    18301 cgaagagccg ctaaaagcgc gcgtcattga tgagcttcgc ccgaccacgc gtgcgcccag
    18361 cgaaaagctg accggcaaac cgtcgaaaaa agtgctggcg aaacgcgccg agaagaaaaa
    18421 agagaaagaa aaagagaagc cgcgcgtgaa gaaacgttac cgcgatacaa aaaatatcgg
    18481 taagcgccgc aagccaagcg gtacgaaaat gcaggagcaa tccagcgaag agtgatgata
    18541 atgccgggtt cgttaacccg gcatttttta tcttccacgg taaaacacgc ctccatacac
    18601 tgcataaata tctgcattgc cgggctgacc gctttcccgg catgatgggc gcacagcgcc
    18661 atgatcgata gcgacggcgc gccaaacggc agctctttca actgaccggt gctaagttct
    18721 cgttcaacgg caaatcgcgg taaaaagctg atgcccaggt tagcagccac acactgttta
    18781 atgctttcaa tactccacag ttcaatggtg ttttccagcg taatccgcct ctgccgtagc
    18841 gtactttcaa atagctggcg gaagacacat tgcggttcat tgatgatgaa gctgcaggga
    18901 tatgctgatc tggctgcgta aaatcagcat cctgtagcag tggagaggcc accagcgcca
    18961 gcggctgctc ccccagttgc tgcatcgtga gcgcgtcatc attacctacg cgataaaaaa
    19021 cgcccagatc gacctcgtca ttcagcaacg catcacgtat cacatagcaa ttcagcgact
    19081 gtagcgacaa tctgacattc ggcgctcgca gcttaaaacg ttgtaaaacc tgcggcattt
    19141 tgtatgccag taaggtttca cctgtcgcca cgcgcagctc tccgccgggt tccgcatcct
    19201 gtcttgcggc ttcacgaatc gactccatca cacgcgtcag ttcatggata tgcggtatca
    19261 gctttttccc ctcattggtc aggcacattc ggcgccctat tttctcgaac agttgcaggg
    19321 aaaactcacg ttcaagctgt tgaatatgaa aagttaccgt cgactgagta cagcacagct
    19381 tttgcgaagc ccgcagaaac gagccctctt ccactaccgt tttcagcgta ataaaccgac
    19441 gcagatccat aaccaccaac ctatcgaaaa tctcgaattc agaattaaaa aacattcatt
    19501 tttttaaata tttcatatcg ggtactgtct gctaaaacag aggagatgac aagtgacacc
    19561 gatgctttta agcgctttct ggacttatac attaatcacc gcccttaccc ccggcccaaa
    19621 caatattctc gcgcttagcg cagcaactgc acatggtttt cggcagagta ttcgtgtact
    19681 ggcaggtatg agtctgggat ttttggtcgt catgctgctg tgcgccggga tcgcgttttc
    19741 ccttgcggtt atcgatccgg caatcattca tttgctcagt tgggtagggg ctgcgtatat
    19801 cctgtggctg gcgtggaaaa ttgccaccag tccagcggcg gatgagaagg tcagaccaaa
    19861 accggttggc ttttgggtaa gctttggcct gcagtttgtg aacgtcaaaa ttattctgta
    19921 cggcattacc gctctgtcta catttgtttt accgcaaacg caggcgctga actgggtcat
    19981 cggcgtcagt atattgctgg cattgatcgg cacgttcggt aatgtgtgct gggcgctggc
    20041 gggacatctg tttcagcggg cgtttcgcca ttatggtcgc cagttaaata tcattctggc
    20101 gttactgctg gtgtactgcg cggtgcggat tttttactga cacaaataaa acaaaagcgg
    20161 aaaaggcccg gcctcttccg cttgttatta ccggataagc cttacaggct ttcggtaaag
    20221 gtacgagcga taacgtcgcg ctgctgttcc ggcgtcaggg agttaaaacg caccgcataa
    20281 ccagaaacac gaatagtcag ctgcgggtat ttttccggat gcttaaccgc gtcttccaga
    20341 gtttcacgac gcagaacgtt aacgttcaga tgctgaccgc cttcaacgcg tacttccggt
    20401 ttaacttcca tcggaatttc acggtattca atctcgccca gtttgctgac agccacaact
    20461 tcatcttcag caaagccgga ttttgcaacg atgcagcgcg cttcgccttt ttcgctgtcc
    20521 agcagccaga aggaattcag caggtcgtcg ttagcggctt tagtaatctg gatacctgta
    20581 atcatgtgat gcctccccag gcaaaattat ttgatttcgg tcggcctaat cccggccaat
    20641 tggtaaaacc attgttgctt gagtgtatat atacccttcg atcacccttc attctttgat
    20701 ttaaatcaat aaaaaccaca ccataaaaag ggtgatgaag ggaatttatt gttttacatc
    20761 aacttacacc attcagacct ataaactttt tacataaatt ttcaactatc ttttgtaggt
    20821 aaccgttttt gtagcacgca ggattttgca ctgcagaaag aagcagttaa gctaagggaa
    20881 ctggaaattc gcaggagagc gagatggcga ctgagttaac ctggcacgat gtgctggctg
    20941 atgagaaaca gcaaccttac tttatcaata cgcttcacac tgttgctggc gagcgtcagt
    21001 cgggtatcac ggtctacccg ccgcaaaaag atgtatttaa cgcctttcgc ttcacggaac
    21061 tgggcgacgt taaggtggtg atcctgggac aagatcctta ccacggcccc ggccaggcac
    21121 atggtctggc gttttccgtg cgtcctggga tcgctccccc gccgtcatta gtgaatatgt
    21181 acaaagagct ggaagcctcc attcccggct ttgttcgccc cgcgcacggt tatctggaaa
    21241 gctgggcgcg ccagggcgta ctgttactga atacggtgct cacggtacgg gcaggccagg
    21301 cgcactctca tgccagcctg gggtgggaaa cctttacgga taaagtgata agcctgatta
    21361 accaacaccg cgaaggggtc gtcttcctgc tgtggggctc gcacgcccag aagaaaggcg
    21421 cgattattga tccacagcgc caccatattc tgaaagctcc gcatccctcg ccactctctg
    21481 cgcaccgcgg attttttggc tgtaaccatt ttgcgctaac gaaccaatgg ctggaacaac
    21541 acggcgagaa aactatcgac tggacgccag tattaccggc tgagagtgaa taacgttggc
    21601 gactcgccgt tttatcgccc ggataacggc gcgaaagcgc cttgtctgac cgggcggtag
    21661 aaagtacatc attggcccgg cgcgcgttgc gtcaccgggc tgcagccctt acgctttatt
    21721 ctgtcgccac cactcggcga gcagtacgcc tgtcgcaacc gacacattca ggctttccac
    21781 gttcccggtg ccgttaattt tcacgcacag atcgtcgggt tcgcgcgccg cttccggcag
    21841 gtagtcatat tcacggccta agaccagcac catcttttcc ggcagggtcg tactaaagag
    21901 cgcctgaccg cgatcgctgg acgtcgtcac cacggtgtac cccgcctgac gaaagtcatc
    21961 cagtacgtca acaatgcttt caccagtgat tggctggaca tgttccgccc cgccttccgc
    22021 ggtacgaatc gccgcgccgg actccagcaa cgctgcatcc tgtaccacca cgcccttcac
    22081 gccgaagtgc gcgcagctac gcatcatgcc gcccagatta tgcgggttag cgacatcttc
    22141 caacgccagc acgcagtctt gatccgccgc ctgctttacc cattgcttaa cggtcgtacc
    22201 gttacgcttt ttaatcagga aacacacgcc gccgtggtgc tcagtcccgg aagcttttgc
    22261 cagttcggct tcatccacca catggtaggc tttacgattc gccgccatcc agcgcagcgc
    22321 ctctttaaaa cgcggcgtta cgctttggat aaaccatgcg cgcacgatgg cgtcaggacg
    22381 gctctggaat agcgcctggc aggcattttc gccgtagacg cgcgtctctt ccgcacgctg
    22441 gcgacgcaaa acttcagggt cgataaaact tttaccgcta ataccaccat gatcgacttt
    22501 ctcaggcgtt tcatcgcctg gcgcgcggga cacggtgcgc cacggcgaag tttcatgttt
    22561 acggtcacgg ctctgattat ttcgctcatc acgggcgggg cgacgtccac cgtcagtgcg
    22621 agactttgct gggcggcctc cccctttccc ggtacgcggg ttatgggtgc gtttatcaga
    22681 gtcatcatca ctacggacat acatcacttt gactttgccg cttttgtttt ttaattcatc
    22741 gttcatgctt ttctccacca gcgctgcgcg aagcgcgaag attacccgat gtgcatccgg
    22801 ttagccatga tttcgtttaa aagcttgcga ctattgtact cattgaataa aacacattgt
    22861 tgtttagcac agactcctcg ataatatata acattataga aacatcccgc gcgtagcggg
    22921 acgtcttccg acgtattcag aggttagcta tgaacaccgt ttgtacccat tgtcaggcca
    22981 ttaaccgcat ccccggcgat cggcttcagg acgcggcaaa atgtggacgc tgcggtcatg
    23041 agttgtttga cggagaagtc attaatgcga ccggcgaaac gctggacaaa ctgttgaagg
    23101 acgatcttcc agtggtgatc gacttttggg caccctggtg cggcccttgc cgtaactttg
    23161 cgccaatctt cgaggatgtc gcagaagagc gcagcggtaa agtccgtttc gtcaaagtaa
    23221 ataccgaggc ggaacgggaa ctcagcgctc gtttcggtat ccgcagcatc ccgatgatta
    23281 tgatttttaa acatggacag gtggtcgata tgcttaatgg cgcagtgcct aaagcgcctt
    23341 tcgacagctg gctgaacgaa gcgctgtaaa cgccacgggg cgcatcttgt gccccgtttt
    23401 cacctctgcc acaatagcgt ttttctccgc aaacgctttc tatgaccaat aacgctgtcc
    23461 ttcagttacg cgccgaacgg cttgcgcgcg ctactcgccc ttttcttgcc agaggcaatc
    23521 gggttcgccg ctgtcaacgc tgcctgctgc cgctaaaatc ttgcctgtgt gatacgttaa
    23581 cgccttctca ggcgaaaagc cgtttttgtc tggtcatgtt tgacactgaa ccgatgaaac
    23641 ccagcaatac cggccggctg atagccgata ttttgccaga taccgcggcg tttcagtggt
    23701 cgcgtaccga gccgccgcag gcgttgctgg agctggtaca gcatccggat tatcagccga
    23761 tagtggtctt tcctgcgtcc tacgccggcg aagcgcgcga ggtcatttcc accccgcccg
    23821 ccgggaaacc gccgctgttt attatgctgg acggcacctg gcccgaagca cgtaaaatgt
    23881 ttcgtaaaag cccttatctg gatcatctgc cggtcatttc cgtcgattta tcgcgtcttt
    23941 cagcttatcg tctgcgtgaa atccatgccg aagggcaata ttgtaccgcc gaagtcgcga
    24001 tagcgttgtt agatctggcg ggagatcccg aggcggcaac cagtttaggt gaacatttca
    24061 tccgtttcaa aacgcgctat ctggcaggaa aaacgcaaca tccgggaaac gtcacagcat
    24121 aaaatagcga aagcgtttaa aattatccgg tcacttctgt gtaagggaaa ccggtatgag
    24181 ccagcaagga ctggaagcgc tactgcgacc aaaatcgatc gcggtgattg gcgcatcaat
    24241 gaagccccac cgcgcgggtt acctgatgat gcgtaacttg ttggcgggcg gattcaatgg
    24301 ccccgtcctt cccgtgacgc ccgcctggaa agccgtttta ggcgtcatgg cctggccgga
    24361 tatcgccagt cttcctttca cccccgatct ggctatttta tgcactaacg ccagccgtaa
    24421 cctggcgtta ctggacgcgc ttggcgcgaa aggttgtaaa acgtgcatta tcctttctgc
    24481 tcccacgtcg caacatgaag aacttcttgc cagtgcccgg cattataaaa tgcgtctgct
    24541 gggtccaaac agtcttgggc tcctcgcgcc gtggcaaggg ctgaatgcca gcttttctcc
    24601 cgtcccgatt aaacagggca agctcgcttt tatttcccag tctgccgccg tgtccaatac
    24661 tattcttgac tgggcgcaac agcgtgaaat gggcttttcc tactttatcg cgctgggcga
    24721 tagcctggat attgatgtcg atgaactact ggactatctg gcgcgcgata gcaagaccag
    24781 cgcaattttg ctctatctgg aacagttaag cgacgcccgc cgttttgttt ccgccgcccg
    24841 tagcgcttca cgtaacaaac cgattctggt gattaaaagc ggccgaagcc cggcagccca
    24901 gcgtttactt aataccagcg cgggaatgga ccctgcgtgg gatgcggcca tccagcgcgc
    24961 aggcctgctg cgagtccagg atacgcacga gcttttttcc gccgtcgaaa cacttagcca
    25021 tatgcgtccg ctacacggcg acagactgat gatcatcagc aatggcgccg cgcctgccgc
    25081 gctggcgtta gatgagttgt ggtcgcgtaa cggcaagctg gcgacattga gcgaagagac
    25141 ctgcctgcaa ctacggcaga cgcttcccgc gcacattgat attgccaatc cgctggatct
    25201 gtgtgatgac gccagcagcg aacattacgt caaaacgctg gatatcctgc tcgccagtca
    25261 ggattttgac gcgcttatgg ttatccactc tcccagcgct gccgcgccgg gtacggaaag
    25321 cgcccatgct ctgatcgaga cgattaagcg ccaccccaga ggcaagtttg ttacgctgct
    25381 gacaaactgg tgcggcgagt tctcatctca ggaagcaaga cggctgttca gcgaagccgg
    25441 attaccaacc taccgcacgc cggaaggcac gattaccgcg tttatgcaca tggtggaata
    25501 ccggcgtaac cagaagcaac tgcgggaaac gccagcgttg ccgagtaacc tgacgtccaa
    25561 taccgctgag gcgcataatc tgttacagcg ggcgattgcg gaaggcgcca cttcactgga
    25621 tacccatgaa gtacagccga ttttacacgc ctatgggctg cacacgctcc caacctggat
    25681 tgccagcgac agcgctgaag cagtgcatat cgccgaacag ataggctatc cggtagctct
    25741 caagctgcgc tcgcccgaca ttccgcataa atctgaagtt cagggggtca tgctttacct
    25801 gcgcaccgca agcgaggtac aacaggccgc gaacgccatt ttcgatcgtg taaagatggc
    25861 ctggccgcag gcgcggattc acggtttgct ggtacaaagc atggctaacc gcgccggcgc
    25921 gcaggagctg cgtgtggtgg tcgagcacga tccggtgttt ggtcctttga ttatgttggg
    25981 tgaaggcggc gtagagtggc gtccggaaga gcaggccgtc gtcgcgctgc cgccgctcaa
    26041 catgaatctg gcgcgctatc tggtgattca gggcattaaa cagcggaaaa ttcgcgcccg
    26101 tagcgcgctg cgtccgctgg atattgtcgg tttaagccaa ttgctggtcc aggtttcaaa
    26161 cctgattgtc gattgcccgg aaattcagcg tctggatatc catccgctgc tggcttccgc
    26221 cagtgagttt accgcgctgg atgtgacgct ggatattgcc ccgtttgatg gcgataacga
    26281 aagtcgtctt gcggtacgcc cctatcccca ccagcttgaa gagtgggtgg agatgaaaaa
    26341 cggcgatcgc tgcctgttcc gtccgatcct gccggaagat gagccccaac tgcgacaatt
    26401 catcgcacag gtcaccaaag aggatcttta ctaccgttat ttcagcgaga tcaacgaatt
    26461 cacccatgaa gatttagcca acatgacgca gatcgactac gatcgagaaa tggcctttgt
    26521 ggccgtgagg cggatggaca acgctgaaga gatcctcggc gtaacgcgcg cgatctccga
    26581 tcctgacaac gtagatgccg aatttgccgt attggtgcgt tcagatctta aagggttggg
    26641 tttaggacgc cgtttaatgg agaaattgat tgcctatact cgcgatcacg gattgaagcg
    26701 gctgaacggt attacgatgc cgaacaatcg cggcatggtc gcgctggcca gaaaactggg
    26761 atttcaggtc gatattcagc tcgacgaggg catcgtggga ttgacgctga atctggccaa
    26821 atgtgatgaa tcgtgagtaa tgtactggaa atgttgacca ctttaacggg tactgatgtt
    26881 attattgctc gcttatgtcg tctgcatagc acagaggacc cttcaatgaa cagagaagaa
    26941 atgcactgtg atgttgtcaa aatttaagcg taataaacat caacaacacc ttgcccaact
    27001 ccctaagatt tctcagtcag ttgatgatgt agatttcttt tatactcctg ctacttttcg
    27061 ggagacactg ctggagaaaa tcgccagcgc gacgcagcgt atttgtatcg ttgccctgta
    27121 tctggaacag gacgatgggg gtaaaggtat actcgacgcg ctctatgcgg ctaaacggca
    27181 gcgtcctgaa ctggacgtga gggtgctggt cgactggcat cgcgcgcaac gcgggcgcat
    27241 tggcgcagcg gcctcgaata ccaatgcaga ctggtattgc cgactggcgc aggaaaaccc
    27301 cggcattgat gtcccggttt acggcgtgcc gattaatacg cgagaagcgc ttggcgtact
    27361 gcattttaaa ggctttatca ttgatgatag cgtcctgtac agcggcgcca gcctgaacga
    27421 tgtctatctc catcagcatg acaaatatcg ctacgatcgc taccagctga ttcgcaatcg
    27481 gcaaatggca gacatcatgt ttgactgggt gacgcaaaat ctgatgaatg gccgtggtgt
    27541 gaatcgtctg gataataccc agcggccgaa aagcccggag attaaaaacg atatccgctt
    27601 ataccgtcag gagctgcgtg atgcgtcata tcattttcag ggtgacgcta atgacgagca
    27661 gctctccgtt acgccgctgg tcgggcttgg aaaatccagt ctgctgaaca aaaccatttt
    27721 ccatctcatg ccctgtgcgg agcataagct caccatttgt accccttact tcaatctacc
    27781 agcggtactg gtgcggaata ttattcagct actgcgcgac ggaaagaaag tcgaaatcat
    27841 tgttggcgat aaaaccgcga atgattttta cattccggaa gatgaaccgt tcaagatcat
    27901 tggcgcgctg ccctatctct atgagattaa cctgcgccgc ttcctgagcc gtttacagta
    27961 ttacgtcaat accgatcagc ttgtggtgcg tctgtggaaa gatgacgaca atacctatca
    28021 tttgaaaggg atgtgggtag atgataaatg gatgctactc accggcaaca atctgaatcc
    28081 tcgcgcctgg cgtctggatc tggaaaacgc cattctgatc cacgatccta agcaagagct
    28141 tgcccctcag cgggaaaaag agctggaact tatccgaacg cacacaacca tcgtaaaaca
    28201 ttatcgtgac ctgcagagca ttgccgacta tccgataaaa gtgcgtaaat tgattcgccg
    28261 tctgcgccgg atccgcatcg acagattaat tagccgtatc ctgtaatcga agccccgtcc
    28321 tgtacggggt tttctcttag gagtgaactg gtgcgcgtgt tgattccttt tacggtgttg
    28381 tttctctccg ggtgcagcca tctggctaac gaccactgga gcggtcagga taaagcccag
    28441 cattttatgg catcagcgat gctatcggca gccggtaatg agtatgcgcg tcaccaggga
    28501 gtaagccctg accgcagcgc agcgataggg ctgatgtttt ctttgagtct cggagcctca
    28561 aaagaactct gggacagccg cccggaaggc agcggctgga gctggaaaga ttttgtctgg
    28621 gatgtcgctg gcgcgacaac cggttacgct atctggcaaa tggcgcgata ctaaaggcgt
    28681 aagccctttc ctttacggtg caacatcaac gaaaccagga aagccagaac ggccatcgcg
    28741 gtaacatacc agaagaacga actctccata ccgacagatt ttagcgacag cgcgacatat
    28801 tccgcagagc cgccaaataa cgcgtttgct accgcgtaag ataaaccgac gcccagggcg
    28861 cgaacctgcg ccggaaacat ctccgctttc aggatcccgc taatcgaggt atagaaactc
    28921 acaatcaata gcgcgcacat cactaaagca aatgcggcat aaggcgacgt cacattctgc
    28981 aacgcggaga gaattggaac ggtgaaaagc gtcgcgagtg cgccaaaaca tagcatagag
    29041 gtgcgcctgc caatcttatc ggataacgcg ccgaataacg gctgcaccaa catgaaaaca
    29101 cacagcgcag ccgtcataat gccgctggcg acattggcat gcatacctgc tgtatttacc
    29161 agatatttct gcatataggt ggtgaaggta taaaagcaca gcgagcctgc cgcggtgaaa
    29221 ccaagcacca tcaaaaaggc tttgcgatta cgccacaaac ctttcaacga accggcttct
    29281 tttaatgcgc gagtctcatg cttcgaggtt tcatccagct ggcgacgtag ccataacgcc
    29341 acaaccgcca gcacggcgcc cagcgcaaag ggaatacgcc atccccaggc acgaagctca
    29401 gcatcctcca gaacctgctg caaaatcaca acgaccagca atgccagtag ttggccaccg
    29461 ataagcgtaa cgtactgaaa cgacgcgaaa aatcccttac gaccttcaag cgcaacttca
    29521 ctcatatatg tcgcgctggt cccatactct ccccctaccg agagcccctg aaataacctt
    29581 gcaataagta gcagcgccgg tgcccaggtg ccgatggtat cgtaaccagg taagcaggca
    29641 atcaccagcg accccatgca catcatgcac accgaaatca acattgaggc tttgcgcccg
    29701 cgtcgatcgg caatgcgtcc aaacagccaa ccaccgatag accgcattaa aaaaccggcg
    29761 gcaaagacgc ctgccgtttg caaaagctga gtagtggtat tactagaagg aaagaagata
    29821 tgtgcaaaat agagcgagca gaaagagtag acgtagaaat caaaccattc cactaagttt
    29881 ccggaagagg cccccacgat agcccatatg tgtcgccgca tctccggagc ctcagcgttg
    29941 tttttatcta tacgctgaat aatttctgcc atactgttct ccttgttgcc aggcttaatc
    30001 ggccttttat tttggagatt cagattacgc gagactaaaa agtaaataaa gtgttaatta
    30061 tttgtctgct aatttttatc cccaccgtgc ctgatgctgg cgtttccgtt tcagatagtc
    30121 ttcgtcctga cggattttat cccaccaacc tttgaaaacc gttgccgccg cggccttaat
    30181 aggatcatta ccccgtgtat tcaggctgcc gtcttctgca tactttttac cacctttata
    30241 gttagcgtat cgcctggcgc gggtgtatcc catctgaata aatttacgcg ccatgtccat
    30301 accaacgaaa tcatcctgct gccggtaagc ttcgaacaac tggtagatct gttctgcgga
    30361 tttcatcgcc gatgcttcat ctttatagcg ccagaaagga agaatttcgc ttttgtaggg
    30421 ttcaaccagt agccccccct gctctcctcg tccaacctga tacaattcag gctgctggcg
    30481 gaagtcaatg ctggaaaagt cttgctggta gttaaaaggt ttgatagcca atgaaaatcc
    30541 tcactgctta tataagcacg tgtaaaggat agttcatcgt taacgattgg gtgggttgtg
    30601 ctcttatcgg ttctacaaga gcaccagctt cgtaggcggg ataattgctg taggccggat
    30661 aaggcgaagc tgccatccgg cggtgcaggt tgcctgatgg cgctgcgctt atcaggccta
    30721 catttttaca gttaccacac acgcaaagaa gcccgtccgt cagaacgggc ttcttcactt
    30781 gtctgatgcc tggcagttta tggcgggcgt gctgcccgcc accctacggg ccgttactgc
    30841 gcaacgttca aatccgctcc cggcggattt gtcctcctca ggagagtgct caccggcaga
    30901 ccacagataa a
//
LOCUS       DAGWFR010000028        30888 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.028, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000028 DAGWFR010000000
VERSION     DAGWFR010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 30888)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30888)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30888
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.028"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..458)
                     /locus_tag="MOX77_001405"
     CDS             complement(<1..458)
                     /locus_tag="MOX77_001405"
                     /EC_number="3.1.3.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461276.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphatase"
                     /protein_id="HCA3356981.1"
                     /translation="MPEEAHVQCKGFLFDLDGTLVDSLPAVERAWCSWADRFNLAHDE
                     VLGFIHGKQAITSLRHFMAGKSEAEIAAEFTRLEQIEATETAGITALPGAVDLLNHLN
                     KAGIPWAIVTSGSMPVARACHQVAGLPAPEVFVTAERVKRGKPEPDAYLLG"
     gene            complement(451..945)
                     /locus_tag="MOX77_001406"
     CDS             complement(451..945)
                     /locus_tag="MOX77_001406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007371080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfbU family protein"
                     /protein_id="HCA3356982.1"
                     /translation="MEMTNAQRLILSNQYKMMTMLDPTNAERYRRLQTIIERGYGLQM
                     RELDREFGELTEETCRTIIDIMEMYHALHVSWTNLKDTQAIDERRVTFLGFDAATEAR
                     YLGYVRFMVNIEGRYTHFDAGTHGFNAQTPMWEKYQRMLNVWHACPRQYHLSANEINQ
                     IINA"
     gene            complement(1028..1483)
                     /locus_tag="MOX77_001407"
     CDS             complement(1028..1483)
                     /locus_tag="MOX77_001407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF412 domain-containing protein"
                     /protein_id="HCA3356983.1"
                     /translation="MSTPDNRSVNFFSLFRRGQHYAKTWPMEKRLAPVFVENRVIRMT
                     RYAIRFMPPVAVFTLCWQIALGGQLGPAVATALFALSLPMQGLWWLGKRSLTPLPPSI
                     LNWFYEVRGKLQEAGQALAPVEGKPDYQALADTLKRAFKQLDKTFLDDL"
     gene            1823..3025
                     /gene="ackA"
                     /locus_tag="MOX77_001408"
     CDS             1823..3025
                     /gene="ackA"
                     /locus_tag="MOX77_001408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HCA3356984.1"
                     /translation="MSSKLVLVLNCGSSSLKFAIIDAVNGDEYLSGLAECFHLPEARI
                     KWKMDGSKQEAALGAGAAHSEALNFIVNTILAQKPELSAQLTAIGHRIVHGGEKYTSS
                     VVIDESVIQGIKDSASFAPLHNPAHLIGIAEALKSFPQLKDKNVAVFDTAFHQTMPEE
                     SYLYALPYSLYKEHGVRRYGAHGTSHFYVTQEAAKMLNKPVEELNIITCHLGNGGSVS
                     AIRNGKCVDTSMGLTPLEGLVMGTRSGDIDPAIIFHLHDTLGMSVDQINKMLTKESGL
                     LGLTEVTSDCRYVEDNYATKEDAKRAMDVYCHRLAKYIGSYTALMDGRLDAVVFTGGI
                     GENAAMVRELSLGKLGVLGFEVDHERNLAARFGKSGFINKEGTRPAVVIPTNEELVIA
                     QDASRLTA"
     gene            3102..5246
                     /gene="pta"
                     /locus_tag="MOX77_001409"
     CDS             3102..5246
                     /gene="pta"
                     /locus_tag="MOX77_001409"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HCA3356985.1"
                     /translation="MSRIIMLIPTGTSVGLTSVSLGVIRAMERKGVRLSVFKPIAQPR
                     AGGDAPDQTTTIVRANSTLPAAEPLKMSHVESLLSSNQKDVLMEEIIANYHANTKDAE
                     VVLVEGLVPTRKHQFAQSLNYEIAKTLNAEIVFVMSQGTDTPEQLNERIELTRSSFGG
                     AKNTNITGVIINKLNAPVDEQGRTRPDLSEIFDDSSKAQVIKIDPAKLQESSPLPVLG
                     AVPWSFDLIATRAIDMARHLNATIINEGDIKTRRVKSVTFCARSIPHMLEHFRAGSLL
                     VTSADRPDVLVAACLAAMNGVEIGALLLTGGYEMDARISKLCERAFATGLPVFMVNTN
                     TWQTSLSLQSFNLEVPVDDHERIEKVQEYVANYVNADWIESLTATSERSRRLSPPAFR
                     YQLTELARKAGKRVVLPEGDEPRTVKAAAICAERGIATCVLLGNPDEINRVAASQGVE
                     LGAGIEIVDPEVVRESYVARLVELRKSKGMTEPVAREQLEDNVVLGTLMLEQDEVDGL
                     VSGAVHTTANTIRPPLQLIKTAPGSSLVSSVFFMLLPEQVYVYGDCAINPDPTAEQLA
                     EIAIQSADSAIAFGIEPRVAMLSYSTGTSGAGSDVEKVREATRLAQEKRPDLMIDGPL
                     QYDAAVMADVAKSKAPNSPVAGRATVFIFPDLNTGNTTYKAVQRSADLISIGPMLQGM
                     RKPVNDLSRGALVDDIVYTIALTAIQASQQQQ"
     gene            5464..6984
                     /gene="yfcC"
                     /locus_tag="MOX77_001410"
     CDS             5464..6984
                     /gene="yfcC"
                     /locus_tag="MOX77_001410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative basic amino acid antiporter YfcC"
                     /protein_id="HCA3356986.1"
                     /translation="MSVVTESKTARKWAMPDTLVIIFFVAILTSIATWVVPVGMFDSQ
                     EVQYQVDGQTKTRKVVDPHSFRIVTNEAGEAQYHRVQFFTTGDERPGLMNFPFEGLTS
                     GSKFGTAVGIIMFMLVIGGAFGIVMRTGTVDNGILALIRHTRGNEVLFIPVLFVLFSL
                     GGAVFGMGEEAVAFAIIIAPLMVRLGYDSITTVLVTYIATQIGFASSWMNPFCVVVAQ
                     GIAGVPVLSGSGLRIVVWIVATLIGLVFTLVYASRVKKNPLLSRVHESDRYFREQQDE
                     VVQRPFTFGDWLVLLVLTGVMIWVVWGVIVHAWFIPEIASQFFTMGVVIGLIGVIFRL
                     NGMTVNVMASSFTEGARMMIAPALLVGFAKGILLLVGNGEAGEPSVLNTLLNSIAHGI
                     SGLNNAIAAWFMLLFQAVFNFFVTSGSGQAALTMPLLAPLGDLVGVNRQVTVLAFQFG
                     DGFSHIIYPTSASLMATLGVCRVDFRNWLKVGASLLGLLFIMSSVVVIGAQMMGYH"
     gene            complement(7033..7986)
                     /locus_tag="MOX77_001411"
     CDS             complement(7033..7986)
                     /locus_tag="MOX77_001411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase family protein"
                     /protein_id="HCA3356987.1"
                     /translation="MIKLAPAGLKDDIEMRKVYAGFVAGQIEAGSPIIALEADLMSSM
                     AMDSVARDYPQHVINCGIMEANVIGTAAGLALTGRKPFVHTFTAFASRRCFDQLFMAL
                     DYQRNNVKVIASDAGVTACHNGGTHMSFEDMGIVRGLAHSVVLEVTDAVMFANILRQL
                     MDLDGFYWLRTIRKQATSIYAPGSTFTIGKGNVLREGDDITLIANGIMVAEALEAARQ
                     LEQEGVSAAVIDMFTLKPIDRMLVKNYAEKTRRIVTCENHSIHNGLGSAVAEVLVENC
                     PVPMRRVGVKERYGQVGTQDFLQQEYGLTAAAIVEAAKSLL"
     gene            complement(7979..8809)
                     /locus_tag="MOX77_001412"
     CDS             complement(7979..8809)
                     /locus_tag="MOX77_001412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HCA3356988.1"
                     /translation="MNVTEITQLARDIRVATLKSLNHLGFGHYGGSMSVVETLAVLYG
                     AVMKIDPADPDWPERDYFVLSKGHAGPALYSTLAIKGYFPREELNTLNQNGTRLPSHP
                     DRLKTHGVDATTGSLGQGISIAGGMALSHKLARRPNRVFCIVGDGELNEGQCWEAFQF
                     IAHHRLNNLTVFIDWNKQQLDGELEEIINPFDLEGKFRAFGFDVVTVKGDDIAGLLAV
                     VQPVPPADARPRVVILDSIKGQGVPCLEQLTNSHHLRLTDGMKQTLNEAIHQLEVMHD
                     "
     gene            complement(8806..10197)
                     /locus_tag="MOX77_001413"
     CDS             complement(8806..10197)
                     /locus_tag="MOX77_001413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461284.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate transporter subunit IIC"
                     /protein_id="HCA3356989.1"
                     /translation="MFILETLNFVVDILKVPSVLVGLIALIGLVAQKKAFSDVVKGTI
                     KTILGFIVLGGGATVLVGSLNPLGGMFEHAFNIQGIIPNNEAIVSIALEKYGASTALI
                     MAFGMVANIVVARFTRLKYIFLTGHHTFYMACMIGVILTVAGFEGVGLVFTGSLILGL
                     VMAFFPALAQRYMRRITGTDDIAFGHFGTLGYVLSGWIGSLCGKGSRSTEEMNLPKNL
                     SFLRDSSISISLTMMIIYLIMAVSAGREYVEATFSGGQNYLVYAIIMAITFAAGVFII
                     LQGVRLILAEIVPAFTGFSEKLVPNARPALDCPVVYPYAPNAVLIGFLFSFLGGLVGL
                     FLLGQMKLVLILPGVVPHFFTGATAGVFGNATGGRRGAMIGAFANGLLITFLPVLLLP
                     VLGAIGFANTTFSDADFGVIGILLGNLARYLSPMAITGLVVALFALLVAYNVLAKSKK
                     ATAEVQENSGAKE"
     gene            complement(10218..10490)
                     /locus_tag="MOX77_001414"
     CDS             complement(10218..10490)
                     /locus_tag="MOX77_001414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HCA3356990.1"
                     /translation="MKIMAICGSGLGSSFMVEMNIKKVLKKLNIDAEVEHSDLSSATP
                     GAADLFVMAKDIAASASVPESQLVVINNIIDINELETQLRAWFAKQ"
     gene            complement(10571..11014)
                     /locus_tag="MOX77_001415"
     CDS             complement(10571..11014)
                     /locus_tag="MOX77_001415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HCA3356991.1"
                     /translation="MLGTWLSDATITLRESVETWPQALEICGKPLLDAGVIAPEYITA
                     IVQQHQKLGPYYVLAPGLAMPHARPEEGAKGLGLSLLKLQRGVSFGADEFDPVDIIIM
                     LAAPDKHSHIEMISALAELFSSDVDMEKLHQAKNLEDIKTIIDRF"
     gene            11267..12286
                     /locus_tag="MOX77_001416"
     CDS             11267..12286
                     /locus_tag="MOX77_001416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HCA3356992.1"
                     /translation="MSIPRKRRSTGKVTIADVAQLAGVGTMTVSRALRTPEQVSDKLR
                     EKIEAAVHELGYMPNLAASALASASSHTIAMVVPNLAEAGCSEMFAGLQQILQPAGYQ
                     IMLAESQHRVEQEEKLLETLLASNIAAAILLSVEHSTTVRQWLKNASIPVMEMGAIRS
                     DPIDMNIGIDNVAAMYELTEMLIQRGYQNIGLLCANQEQWIFQQHLHGWYKAMLRHHM
                     SPNRVINAALPPNFSTGASQLPEFLLAWPELDALVCVSDELACGALYECQRRRIKVPD
                     DLAVVGFGDSDVSRVCQPPLTTMAVPHRKIGSEAGRALLERLNQGNWSDRKSIASSLC
                     MRESC"
     gene            complement(12292..12846)
                     /gene="yfcD"
                     /locus_tag="MOX77_001417"
     CDS             complement(12292..12846)
                     /gene="yfcD"
                     /locus_tag="MOX77_001417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase YfcD"
                     /protein_id="HCA3356993.1"
                     /translation="MVEQRRLASTEWVDIVNEDNEVIAQSSREQMRAQRLRHRATYIV
                     VHDGMGKILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPFA
                     EHGLFYFEDQHCRVWGALFSCVSHGPFALQEDEVSEVCWLTPEEITARCDEFTPDSLK
                     ALALWMTRNAKNEAALQEKPEETE"
     gene            complement(12903..13454)
                     /gene="yfcE"
                     /locus_tag="MOX77_001418"
     CDS             complement(12903..13454)
                     /gene="yfcE"
                     /locus_tag="MOX77_001418"
                     /EC_number="3.1.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphodiesterase"
                     /protein_id="HCA3356994.1"
                     /translation="MKLMFASDIHGSLPATERVLERFAQSGARWLVILGDVLNHGPRN
                     ALPEGYAPAQVAERLNAVATQIIAVRGNCDSEVDQMLLHFPITAPWQQILTQERRLFL
                     THGHLFGPTNLPALHTGDVLVYGHTHLPVAQQQEGLYHFNPGSVSIPKGGYAASYGIL
                     DDNVLSVIALNDQSIIAQVAINS"
     gene            complement(13510..14154)
                     /gene="yfcF"
                     /locus_tag="MOX77_001419"
     CDS             complement(13510..14154)
                     /gene="yfcF"
                     /locus_tag="MOX77_001419"
                     /EC_number="2.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione transferase"
                     /protein_id="HCA3356995.1"
                     /translation="MSKPVIVLWSDANFFSPYVLSAWVALQEKGLSFTLKTRDLDQGE
                     HLQPGWRGYALTQRVPVLEADNFELSESSAIAEYLEERFAPPQWERIYPHDLQKRARA
                     RQIQAWLRSDLLPLREERPTDVVFAGAKKAPLSEAGKASAAKLFATAEALLGQGTQNL
                     FGEWCIADTDLALMINRLVLHGDDVPASLAAYATFQWQRASVQRFIALSSKRSG"
     gene            14297..14944
                     /gene="yfcG"
                     /locus_tag="MOX77_001420"
     CDS             14297..14944
                     /gene="yfcG"
                     /locus_tag="MOX77_001420"
                     /EC_number="1.8.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GSH-dependent disulfide bond oxidoreductase"
                     /protein_id="HCA3356996.1"
                     /translation="MIDLYYAPTPNGHKIMLFLEEAELAYRLLKVDISKGNQFRPDFL
                     AISPNNKIPAIVDHAPADGGQPLSLFESGEILLYLAEKSGKLLSGELRERHTTLQWLF
                     WQVGGLGPMLGQNHHFNHFAPQAIPYAIERYQVETQRLYNVLNKRLETSPWLGGDHYS
                     IADIASWPWVNAHQRQRIDLDTYPAVYNWFERIRTRPATARALLQAQLHCNSTKA"
     gene            15068..15961
                     /locus_tag="MOX77_001421"
     CDS             15068..15961
                     /locus_tag="MOX77_001421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01777 family oxidoreductase"
                     /protein_id="HCA3356997.1"
                     /translation="MQILITGGTGLIGRHLIPRLLILGHQVTVVTRNPDNARQILDSR
                     VTLWKGLAEREHLNEIDAIINLAGEPIADKRWTSQQKERLCQSRWAITQKLVDLIHAS
                     ATPPSVLISGSATGYYGDLGDVVVTEDEPPHNEFTHKLCARWEQIACRAQSDQTRVCL
                     LRTGVVLAPQGGILGKMVPPFRLGLGGPVGNGRQYLAWIHIDDMVNGILWLLDNDLRG
                     PFNMVSPYPVHNEQFAHALGRALRRPAIIRIPATAIRLLMGESSVLVLGGQRALPKRL
                     EAAGFAFRWYDLEEALADVIR"
     gene            complement(16013..16786)
                     /gene="hisP"
                     /locus_tag="MOX77_001422"
     CDS             complement(16013..16786)
                     /gene="hisP"
                     /locus_tag="MOX77_001422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine ABC transporter ATP-binding protein
                     HisP"
                     /protein_id="HCA3356998.1"
                     /translation="MSENKLHVIDLHKRYGGHEVLKGVSLQARAGDVISIIGSSGSGK
                     STFLRCINFLEKSSEGAIIVNGQNINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFN
                     LWNHMTVLENVMEAPIQVLGLSKHDARERALKYLAKVGIDERAQGKYPVHLSGGQQQR
                     VSIARALAMEPDVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHV
                     SSHVIFLHQGKIEEEGNPEQVFGNPQSPRLQQFLKGSLK"
     gene            complement(16800..17507)
                     /gene="hisM"
                     /locus_tag="MOX77_001423"
     CDS             complement(16800..17507)
                     /gene="hisM"
                     /locus_tag="MOX77_001423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine ABC transporter permease HisM"
                     /protein_id="HCA3356999.1"
                     /translation="MIEIIQEYWKSLLWTDGYRFTGVAITLWLLISSVVMGGLLAVIL
                     AVGRVSSNKFIRFPIWLFTYIFRGTPLYVQLLVFYSGMYTLEIVKGTDLLNAFFRSGL
                     NCTVLALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSSFKMYRCIILPSALRIAL
                     PAYSNEVILMLHSTALAFTATVPDLLKIARDINSATYQPFTAFGIAAVLYLLISYVLI
                     SLFRRAERRWLQHVSSK"
     gene            complement(17504..18190)
                     /locus_tag="MOX77_001424"
     CDS             complement(17504..18190)
                     /locus_tag="MOX77_001424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012124147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine ABC transporter permease HisQ"
                     /protein_id="HCA3357000.1"
                     /translation="MLYGFSGVILQGAIVTLELALSSVVLAVLIGLVGAGAKLSQNRV
                     TGLIFEGYTTLIRGVPDLVLMLLIFYGLQIALNVVTDSLGIDQIDIDPMVAGIITLGF
                     IYGAYFTETFRGAFMAVPKGHIEAATAFGFTHGQTFRRIMFPAMMRYALPGIGNNWQV
                     ILKATALVSLLGLEDVVKATQLAGKSTWEPFYFAVVCGLIYLVFTTVSNGVLLLLERR
                     YSVGVKRADL"
     gene            complement(18373..19155)
                     /gene="hisJ"
                     /locus_tag="MOX77_001425"
     CDS             complement(18373..19155)
                     /gene="hisJ"
                     /locus_tag="MOX77_001425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine ABC transporter substrate-binding
                     protein HisJ"
                     /protein_id="HCA3357001.1"
                     /translation="MKKLALSLSLVLAFSSATAAFAAIPQKIRIGTDPTYAPFESKNA
                     QGELVGFDIDLAKELCNRINTQCTFVENPLDALIPSLKAKKIDAIMSSLSITEKRQQE
                     IAFTDKLYAADSRLVVAKNSDIQPTVASLKGKRVGVLQGTTQETFGNEHWAPKGIEIV
                     SYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPIGKDYKFGGPAVKDEKLFGVGTG
                     MGLRKEDNELREALNKAFAEMRADGTYEKLAKKYFDFDVYGG"
     gene            complement(19393..20175)
                     /gene="argT"
                     /locus_tag="MOX77_001426"
     CDS             complement(19393..20175)
                     /gene="argT"
                     /locus_tag="MOX77_001426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine/arginine/ornithine ABC transporter
                     substrate-binding protein ArgT"
                     /protein_id="HCA3357002.1"
                     /translation="MKKTVLALSLLIGLGATAASYAALPQTVRIGTDTTYAPFSSKDA
                     KGDFIGFDIDLGNEMCKRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQE
                     IAFSDKLYAADSRLIAAKGSPIQPTLESLKGKHVGVLQGSTQEAYANDNWRTKGVDVV
                     AYANQDLIYSDLTAGRLDAALQDEVAASEGFLKQPAGKEYAFAGPSVKDKKYFGDGTG
                     VGLRKDDTELKAAFDKALTELRQDGTYDKMAKKYFDFNVYGD"
     gene            complement(20464..21033)
                     /locus_tag="MOX77_001427"
     CDS             complement(20464..21033)
                     /locus_tag="MOX77_001427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HCA3357003.1"
                     /translation="MKRLIVGISGASGAIYGVRLLQILRDVDSVETHLVMSQAARQTL
                     ALETHFSLREVQALADVTHDARDIAASISSGSYPTAGMVILPCSIKTLSGIVHSYTDG
                     LLTRAADVILKERRPLVLCVRETPLHIGHLRLMTQAAEIGAVIMPPVPAFYHLPQTLD
                     DVINQTVNRVLDQFDIPLPHDLFVRWQGA"
     gene            complement(21060..22466)
                     /locus_tag="MOX77_001428"
                     /pseudo
     CDS             complement(21060..22466)
                     /locus_tag="MOX77_001428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461299.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
     gene            complement(22530..23633)
                     /locus_tag="MOX77_001429"
     CDS             complement(22530..23633)
                     /locus_tag="MOX77_001429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine/ornithine racemase family PLP-dependent
                     enzyme"
                     /protein_id="HCA3357004.1"
                     /translation="MYMPVLEINLRKLEENARTEKALLASSGIDVMAVNKVFDGCVET
                     AQAVLNGGITVIAESRTYNLKKIRETGCTTCLLRSPCLSEIEDVVRYADISLNSEPVV
                     LRALSQEAQRQGKTHQVLLMVDMGDLREGIWFGEYQRILETVTLITGLPGLELYGLGT
                     NFNCYGTVLPTVKNGEDFLALAARLEADSGIPVRRLSAGNCTSYHLLDKGIWPQGLNH
                     LRIGGLHEFGIEYVDMKYLNEFHHSAKPVDKACSDMYILEAEIIELNSKPTVPVGELG
                     VDAFLQSKTFVDRGIRRRALLAFGRQDVPSDNCVPCDDAITILGQTSDHTLVDIEDCR
                     QSLKVGDVVRFELDYTGLLMACQTKGVAWRFTR"
     gene            complement(23635..25056)
                     /locus_tag="MOX77_001430"
     CDS             complement(23635..25056)
                     /locus_tag="MOX77_001430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HCA3357005.1"
                     /translation="MSNTNSGLLGIKDIVFMNVIAILSLRQIPNVAPYGASAMLLWVI
                     AAFCLFFPLAMVCGELSTGWPKDGGIFVWIKEAFGKRIAWIVVVCFLFSCVLFFPLML
                     QFGFTALGYMIGGGLAENKAFIGIGSAVIFWLLTLMNIRGMEWTKIINSISAWCGVFI
                     PSAILILLAVVWLCTGHQMQTDYTTAKNWIPDLGHWDTIVFLSSMMFAFAGLEVAPMI
                     AGRTRNPQRDFPRAMAVSAAVIVGIYMVGTWALNTLLPAGKTDIVAGVMQAMHAAADT
                     LHMPWLIPVMAICMFFGALGQINSWLVGPIYMLQEASREDNLLGDRIGKLHPVWKTPA
                     FALTIQAIIVTVLCFSTFISPSVAAAYWMLTALTTITYFIPYLVMFPAFWRLRKTQPD
                     TPRSFKIPGKVLPAILPALGFLSIAFAVALLFIPPSQIDMGGYFQYAGKIIGGAVLAV
                     VVAEYIYHRAQKRNARLSMAGGK"
     gene            complement(25147..26544)
                     /locus_tag="MOX77_001431"
     CDS             complement(25147..26544)
                     /locus_tag="MOX77_001431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HCA3357006.1"
                     /translation="MTDSIMQNYNQLREQVINGDRRFQHKDGHLCFEGVDLDALARQY
                     PTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANS
                     QYEVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLINVDSLYELEHIDAISRKL
                     KKVANVCVRVEPNVPSATHAELVTAFHAKSGLDLEQAEETCRRILAMPYVHLRGLHMH
                     VGDQVPESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIPVPYKYDDENGDPLKD
                     NMYAGITAQDFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLTEVSCEKRKTNYDL
                     NGNVECHVEWKFVDAGYSVLSDSQHFDWFFYVYNASRMTAAHDAWIKLAGPLCDGGDY
                     FHMGVKGEEFLLPKETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVVMIDKNGETRLI
                     RREDSYEDMVKYDIY"
     gene            26755..28182
                     /locus_tag="MOX77_001432"
     CDS             26755..28182
                     /locus_tag="MOX77_001432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent transcriptional regulator"
                     /protein_id="HCA3357007.1"
                     /translation="MASTNQELASALRMFSRFFDLIHQPLAVINERGEYVYYNQESAD
                     LDGYSIERAMGKHMLDVYPGMKETQSTMLSSLKKGVEYIGHYQIYYNARGQAVDYQHT
                     TASLYASDGGMVGVIEIGRNMSGVRRLQEQVVELNQLLYADHHEKHHAIITENPEMLS
                     NIAKAKRLAASNIPVTIVGETGTGKELFSRLIHQCSKRANKPFIALNCGALPPTLIES
                     TLFGTVRGAYTGAENSQGYLELANGGTLFLDELNAMPIEMQSKLLRFLQDKTFWRLGG
                     QQQLHSDVRIVAAMNEAPVKLIQQERLRADLFYRLSVGMLTLPPLRARPEDIPLLANY
                     FIDKYRNDVPQDIHGLSETARADLLNHAWPGNVRMLENAIVRSMIMQEKDGLLKHIIF
                     EQDELNLGVPETAPENPLPSSPDPQYEGSLEVRVANYERHLIETALDTHQGNIAAAAR
                     SLNVSRTTLQYKVQKYAIRFGVVRN"
     gene            complement(28218..29735)
                     /gene="purF"
                     /locus_tag="MOX77_001433"
     CDS             complement(28218..29735)
                     /gene="purF"
                     /locus_tag="MOX77_001433"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006820991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HCA3357008.1"
                     /translation="MCGIVGISGVMPVNQSIYDALTVLQHRGQDAAGIITIDANNCFR
                     LRKANGLVNDIFEARHMQRLQGNMGIGHVRYPTAGSSSASEAQPFYVNSPYGITLAHN
                     GNLTNAHELRKKLFEEKRRHINTTSDSEILLNIFASELDSFRHYPLEADNIFAAIAAT
                     NRQIRGAYACVAMIIGHGMVAFRDPHGIRPLVLGKRDVGDGRTEYMVASESVALDTLG
                     FEFLRDVAPGEAIYITEKGQLFTRQCADNPVSNPCLFEYVYFARPDSFIDKISVYSAR
                     VNMGTKLGEKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNRYVGRT
                     FIMPGQQLRRKSVRRKLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVY
                     LASAAPEIRFPNVYGIDMPTANELIAHGREVDEIRQIIGADGLIFQDLNDLIEAVRAE
                     NPDIQQFECSVFNGVYVTKDVDQQYLDFLDSLRNDDAKAVLFQNEMENLEMHNEG"
     gene            complement(29773..30261)
                     /gene="cvpA"
                     /locus_tag="MOX77_001434"
     CDS             complement(29773..30261)
                     /gene="cvpA"
                     /locus_tag="MOX77_001434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colicin V production protein"
                     /protein_id="HCA3357009.1"
                     /translation="MVWIDYAIIAVIAFSCLVSLIRGFVREALSLVTWGCAFFVASHY
                     YTYLSVWFTGFEDELVRNGIAIAVLFIATLIVGAIVNFVIGQLVEKTGLSGTDRVLGI
                     CFGALRGALIVAAILFFLDTFTGLSKSEDWSKSQLIPQFSFIIRWFFDYLQSSSSFLP
                     RT"
     gene            complement(30572..>30888)
                     /gene="dedD"
                     /locus_tag="MOX77_001435"
     CDS             complement(30572..>30888)
                     /gene="dedD"
                     /locus_tag="MOX77_001435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cell division protein DedD"
                     /protein_id="HCA3357010.1"
                     /translation="QPVVAVSTPTPAPQPATDDKPAPTGKAYVVQLGALKNADKVNEI
                     VGKLRSAGFRVYTSPSTPVQGKITRILVGPDASKDKMKGSLGELKQISGLSGVVMGYS
                     PN"
BASE COUNT         7555 a         8550 c         7742 g         7041 t
ORIGIN      
        1 cccagcaaat acgcatccgg ctccggtttg ccgcgtttga ctcgttcggc ggtgacaaac
       61 acctctggcg ctggaaggcc cgcgacctga tggcacgcac gcgcgaccgg cattgaaccg
      121 gaggtgacga tagcccacgg aatgcccgct ttattcaggt gattgagtaa atcgactgcc
      181 cccggcaacg cggtgatccc tgcggtttca gtggcttcta tttgctccag gcgcgtaaac
      241 tcagcggcaa tttccgcctc cgatttaccc gccataaaat gccgcaacga ggtgatcgcc
      301 tgtttgccat gaataaagcc cagcacctca tcatgagcaa ggttaaaacg atcggcccag
      361 ctacaccacg cgcgttcgac ggcaggtaat gagtcaacca acgttccatc cagatcaaac
      421 agaaaacctt tacactgcac gtgagcctcc tcaggcatta atgatttgat tgatttcatt
      481 cgcgctcagg tggtactgac gcgggcaggc atgccagaca ttcaacatcc gctggtattt
      541 ttcccacatc ggcgtctggg cattaaagcc gtgcgtcccg gcgtcaaagt gagtgtagcg
      601 tccttctata ttcaccataa aacggacata gccgaggtaa cgcgcttccg tcgcggcgtc
      661 aaaccccagg aaggtgacgc gacgttcgtc gatggcttgc gtatctttga ggttggtcca
      721 ggagacgtgc agcgcatggt acatctccat aatatcgatg atggtacgac aggtctcttc
      781 cgtcagctcg ccaaactcgc gatccagctc gcgcatctgc aggccgtagc cgcgttcaat
      841 aattgtttgt aagcgacggt aacgctcggc gttggtggga tcgagcatcg tcatcatttt
      901 gtactggtta gacaaaatca gacgttgcgc gttggtcatt tccattttga actcctgtat
      961 cacgctatgg cgatgaaaaa aagaaggcat tggtatgcct tcttttatat gcgtaatccg
     1021 gggtcaatta caaatcatcc aagaaagttt tatccagttg tttgaaggcg cgcttaagcg
     1081 tgtcagctaa tgcctggtaa tccggctttc cttctaccgg cgccagcgct tgtccagcct
     1141 cctgcaattt accgcgaact tcgtaaaacc agttaaggat tgaaggcggc aatggcgtca
     1201 aggaacgttt ccctaaccac cataatccct gcataggcaa gctcagggcg aacagggcgg
     1261 tcgccacggc cggacctaac tgaccgccca gcgctatctg ccagcataat gtaaagacgg
     1321 cgacaggcgg cataaatcgt atggcatagc gcgtcatacg aatgacgcgg ttttcgacga
     1381 aaacgggcgc cagccgcttt tccatcggcc acgtcttcgc gtagtgctgc ccccggcgaa
     1441 ataagctaaa aaaatttacg gagcgattat ccggcgtcga catggcctac ctcaatttca
     1501 catataaaat ttaaaaaatt tgtgcaaaac aacaactgcg agggacaacg ttcaaaacat
     1561 tttgtcttcg atacccacta tcaggtatcc tgtgtcggcc tgtcaaaggc cggtagttta
     1621 aaatcattga gtcgtcaata ttacacatag tatgccattg gctgaaaaat acgcaaaatg
     1681 gcatagactc aaaggtattt cttccatcat gcccaaaaaa actcctgcgc atgatgttaa
     1741 tcataaatgt cagggctatc atgcgctacg ctctatggct cactgacgtt tttttagcca
     1801 cgtatcataa ataggtactt ccatgtcgag taagttagta ctggttctga actgcggtag
     1861 ttcttcactg aaatttgcaa ttattgatgc agttaatggt gatgaatacc tttctggttt
     1921 agccgaatgt ttccatctgc cagaagcacg catcaaatgg aaaatggacg gcagtaaaca
     1981 agaagcggct ttaggtgcag gcgccgctca cagtgaagcg ctgaacttta tcgttaacac
     2041 tattctggca caaaaaccag aactgtctgc gcagttaact gcaattggtc accgtatcgt
     2101 acacggcggc gagaagtata ccagctccgt agtcattgat gagtccgtca ttcagggcat
     2161 caaagattcc gcctctttcg caccgctgca taacccggct cacctgattg gtatcgccga
     2221 agcgctgaaa tctttcccgc agctgaaaga taaaaacgtc gccgtgttcg acaccgcctt
     2281 ccatcagacc atgccggaag aatcttacct gtatgccctg ccgtacagcc tgtataaaga
     2341 acatggcgtt cgtcgctatg gcgcacacgg caccagccac ttctatgtaa ctcaggaagc
     2401 ggcaaaaatg ctgaacaagc cggtagaaga actgaacatt atcacctgcc acctgggcaa
     2461 cggcggttct gtttccgcta tccgtaacgg taaatgcgtg gatacctcta tgggtctgac
     2521 cccgctggaa ggcctggtca tgggtacccg ttccggcgat atcgaccctg cgattatctt
     2581 ccacctgcac gacactctgg gcatgagcgt ggatcagatc aacaaaatgc tgaccaaaga
     2641 gtccggtctg ctgggtctga ctgaagtgac cagcgactgc cgttatgttg aagacaacta
     2701 cgccaccaaa gaagacgcaa aacgtgcgat ggacgtttac tgccaccgcc tggcgaaata
     2761 catcggttct tacaccgctc tgatggacgg tcgtctggat gcagtcgtgt tcaccggcgg
     2821 tatcggtgaa aacgccgcga tggttcgcga gctgtctctg ggcaaactgg gcgtactggg
     2881 ctttgaagtc gaccacgaac gtaacctggc ggcccgcttc ggcaaatctg gtttcatcaa
     2941 caaagaaggt acccgtccgg cggtggtgat cccaaccaac gaagaactgg ttatcgcgca
     3001 ggacgcgagc cgtctgactg cctgatttca caccgccagc ctcgctggcg gtgctgtttt
     3061 gtaacccgtc cccaaaagac ggtaacgaaa gaggataaac cgtgtcccgt attattatgc
     3121 tgatccctac cggaaccagc gtcggtctga ccagcgtcag cctcggcgtc atccgtgcta
     3181 tggaacgcaa aggcgttcgt ctgagcgtct ttaagcctat cgcccagcct cgcgctggcg
     3241 gcgatgcgcc tgaccagacc accactatcg ttcgcgcgaa ctctaccctg ccggcggctg
     3301 aaccgctgaa gatgagccac gttgaatctc tgctctccag caaccagaaa gacgtgctga
     3361 tggaagagat catcgcaaac taccatgcga ataccaaaga cgcggaagtg gtgctggttg
     3421 aaggtctggt tccgacccgt aaacatcagt tcgctcagtc tctgaactat gaaatcgcga
     3481 aaacgctgaa tgcggaaatc gtttttgtca tgtctcaggg taccgacacg ccagaacagc
     3541 tgaacgagcg tatcgaactg acgcgcagca gcttcggcgg cgcgaaaaac accaacatca
     3601 ccggcgttat catcaacaaa ctgaatgcgc cggttgatga acaaggccgt actcgcccgg
     3661 atctgtcaga gatttttgac gactcttcca aagcgcaggt gatcaaaatc gatcctgcta
     3721 aactgcagga atccagcccg ctgccggttc tgggcgcggt gccgtggagc ttcgacctga
     3781 ttgcgacccg cgctatcgat atggcgcgtc acctgaacgc caccatcatt aacgaaggcg
     3841 atatcaaaac ccgccgcgtt aaatccgtta cgttctgcgc gcgcagtatt ccgcatatgc
     3901 tggagcattt ccgcgcagga tcgttgttag tgacctcagc tgaccgtccg gacgtactgg
     3961 tcgcagcttg cctggccgcg atgaacggcg tagaaatcgg cgccctgctg ctgaccggcg
     4021 gctatgaaat ggacgcgcgc atttctaaac tgtgcgaacg cgcattcgcc accggtctgc
     4081 cggtctttat ggtgaacacc aacacctggc agacttcgct gagcctgcaa agcttcaatc
     4141 tggaagttcc ggttgatgac catgagcgca tcgagaaagt tcaggaatac gtcgcgaact
     4201 acgttaacgc tgactggatc gagtcgctga ccgccacttc cgagcgtagc cgtcgtctct
     4261 ctccgccggc gttccgctac caactgactg agctggcgcg taaagccggt aaacgcgtag
     4321 tgctgccgga aggcgacgaa ccgcgtaccg tcaaagcggc ggcaatctgc gctgaacgcg
     4381 gcatcgccac ttgcgtactg ctgggcaacc cggatgaaat caaccgcgtc gcggcatctc
     4441 agggcgtaga gctgggcgca ggtattgaaa tcgtcgatcc ggaagtggtg cgtgaaagct
     4501 atgtcgctcg cctggttgag ctgcgtaaga gcaaaggcat gaccgaaccg gttgcccgcg
     4561 aacagctgga agacaacgtg gtgctcggca cgctgatgct ggagcaagac gaagtcgacg
     4621 gcctggtttc cggcgcggtt cataccaccg ccaacaccat ccgtccgccg ctgcagctta
     4681 ttaaaacggc gccgggtagc tccctggtct cttctgtgtt ctttatgcta ctgccggaac
     4741 aggtttacgt ttacggcgac tgcgcaatca acccagaccc gactgcagag cagctggcag
     4801 aaatcgcgat tcagtctgcg gattccgcca ttgccttcgg catcgaaccg cgtgtggcaa
     4861 tgctctccta ctccaccggc acctctggcg cgggcagcga cgtagagaaa gtacgtgaag
     4921 cgacgcgtct ggcgcaggaa aaacgtcctg acctgatgat cgacggtccg ttgcagtacg
     4981 acgccgcggt catggctgac gtagcgaaat ccaaagcgcc gaactcgccg gttgcgggtc
     5041 gcgctaccgt gttcattttc ccggatctga acaccggtaa caccacctac aaagcggtac
     5101 agcgttctgc cgacctgatc tccatcgggc cgatgctgca gggtatgcgc aagccggtga
     5161 acgacctgtc ccgtggcgcg ctggttgacg atatcgtcta caccatcgcc ctgacggcga
     5221 tccaggcttc tcaacagcag cagtaacagt aaaagctaat gccggatggc ggcgtgaacg
     5281 ccttgtccgg cctacaggtg agataccgtt gtaggccgga taagacgcgt tagcatcgcc
     5341 atccggcatt ctgctattta ccctgcaaag cggaattttt tgcttaactg cgctgcatca
     5401 atgaataact attcccttct tctcatactt ggcctctttg ctttgcaaca gggatagtcc
     5461 gtcatgtctg tcgttacaga atcaaaaaca gccagaaaat gggcaatgcc cgatacgctg
     5521 gtcatcatct tttttgtcgc cattttaacc agtatcgcca cctgggtcgt ccccgttggg
     5581 atgtttgata gccaggaagt gcagtatcag gtcgatggtc agacaaaaac ccgcaaagtc
     5641 gtcgacccgc actcttttcg cattgtgacc aatgaggccg gggaagcgca gtatcatcgc
     5701 gtacaatttt tcactaccgg cgatgaaaga ccagggctga tgaattttcc gtttgaaggg
     5761 ttaacatccg gatcgaaatt cggcactgcc gtcggcatca ttatgtttat gttggtgatt
     5821 ggcggcgcat tcggcatcgt gatgcgtacc ggcaccgtgg ataacggcat tctggcgctt
     5881 attcgccaca cgcggggcaa cgaagtcctg tttattccgg tgctatttgt cctcttttcg
     5941 ttagggggcg ccgtatttgg catgggcgaa gaggcggtcg cctttgcaat tatcatagcc
     6001 ccgctgatgg tcaggctggg ctatgacagc attaccaccg tcctggtgac ctatatcgcc
     6061 acccaaattg gctttgccag ttcgtggatg aacccgtttt gcgtagtcgt cgcccagggg
     6121 attgccggcg tgccggtact ttccggctcc gggctgcgta ttgtggtctg gattgtcgcc
     6181 acgctgattg ggctggtttt tacgctggtc tacgcctcac gcgtgaaaaa gaatccgctg
     6241 ctttcccgcg tccacgaatc cgatcgctat ttccgcgaac agcaggatga agtcgtccag
     6301 cgccctttca ccttcggcga ctggctggta ctgctggttc tgaccggcgt aatgatttgg
     6361 gtcgtctggg gcgtgattgt ccacgcctgg tttattccgg agatcgccag ccagtttttc
     6421 accatgggcg tggtgatcgg cctcatcggc gttatcttcc gcctcaacgg tatgacggtc
     6481 aacgtgatgg cgtcctcatt caccgaaggg gcgaggatga tgatcgcgcc cgccttgctg
     6541 gtgggttttg ccaaaggcat tctgctgctg gtcggcaacg gcgaagccgg ggaacccagc
     6601 gtgctcaata cgttgcttaa cagtatcgcg catggcatca gcgggcttaa taatgctatc
     6661 gccgcctggt ttatgctgct cttccaggcg gtatttaatt tctttgtcac gtccggttcg
     6721 ggccaggcgg cgttaaccat gccattactg gcgccgctcg gcgatctggt cggcgttaac
     6781 cgtcaggtga ctgttcttgc cttccagttt ggcgatggct tcagccatat tatctatccg
     6841 acatcagctt cgctgatggc cacgctgggc gtgtgccggg tcgattttcg caactggctt
     6901 aaagtggggg cgtcgctgct gggactgctg tttatcatgt ccagcgtggt cgtgattggc
     6961 gcgcagatga tgggatatca ttgatccaaa atgccggatg agcatcagcg ccatccggca
     7021 atatctccat gattaaagca gtgatttcgc ggcttctaca atcgctgcgg cggtgagtcc
     7081 gtactcttgt tgtaagaaat cctgcgttcc tacctgccca taacgctctt tgacgccaac
     7141 acggcgcatc ggcaccgggc agttttccac cagcacttcc gctaccgctg accctagtcc
     7201 attatggata ctgtggtttt cacacgtgac gatacgccgc gttttttccg cgtagttttt
     7261 caccaacatg cgatcgatag gctttaaggt gaacatatca atgaccgcag cgctcacgcc
     7321 ttcctgctcc agttggcgcg ccgcctccag cgcctccgcc accataatgc cgttggcgat
     7381 aagtgtaata tcatcgccct cgcgcagtac gttgcccttg ccaatggtaa aggtagagcc
     7441 tggcgcatag atactcgtcg cctgcttacg gatggtacgc agccagtaaa aaccgtccag
     7501 gtccattagc tggcgtaaaa tattcgcgaa catcaccgca tccgtcacct ccagtactac
     7561 agagtgcgcc agcccgcgaa caatccccat atcttcaaaa gacatatgag tgccgccgtt
     7621 atggcacgcc gtcactccgg catcggaggc gatcactttg acgttgttac gctgataatc
     7681 cagcgccata aagagctgat caaaacagcg acggctggca aaagcggtaa aggtatgcac
     7741 aaacggtttg cgaccggtca gcgccagtcc cgccgccgtg ccaatcacat tcgcctccat
     7801 aataccgcag ttaatgacat gctgcgggta gtcacgcgcc acgctgtcca tcgccatcga
     7861 gctcattaaa tcagcctcaa gcgcaataat tgggcttccg gcctcaatct gcccggcgac
     7921 aaaaccggca taaactttgc gcatttcgat atcgtcttta agccctgcgg gcgcaagctt
     7981 aatcatgcat gacctccagt tgatgaatgg cctcattgag cgtctgcttc atgccatccg
     8041 tcaggcgtaa gtggtgagaa ttcgttaact gctccaggca tggcaccccc tgccctttaa
     8101 tgctgtcaag gatcacaacc cgtggccggg catcagcggg cggcacaggc tgaaccaccg
     8161 ccagtagtcc ggcgatatca tcgcctttga cggtgacgac atcgaaacca aacgcgcgga
     8221 atttcccttc cagatcgaat ggattgataa tctcctccag ctcgccgtca agctgttgtt
     8281 tgttccagtc aatgaaaacg gtcagattat tcaggcggtg gtgggcaata aactgaaacg
     8341 cctcccagca ctgcccttca ttcagctccc catcgccgac aatgcaaaat acccggttgg
     8401 gtcgccgcgc cagtttatgc gacaacgcca ttccgcccgc aatagagatg ccttgtccca
     8461 gtgagccggt cgtggcgtcc acgccgtgcg tttttagccg atccggatgg ctgggaagac
     8521 gggtgccgtt ctggttaagc gtattcagct cttcgcgcgg gaaatagcct ttaatcgcca
     8581 gggtactgta caacgcgggg cccgcatggc ctttcgacag tacgaagtaa tcgcgctccg
     8641 gccagtccgg gtcggcaggg tcgattttca tcaccgcgcc gtacagaacc gccagagtct
     8701 ccactaccga catgctgccg ccatagtgac caaagccaag atggtttaag gatttgagcg
     8761 tggcgacgcg aatgtcgcgc gccagttggg tgatttcggt tacgttcatt ctttcgctcc
     8821 gctattttcc tgcacttcgg cagtcgcttt tttgcttttg gccaacacgt tgtacgccac
     8881 cagtagcgcg aatagcgcca ccaccagccc cgtgatagcc atcggcgaca gataacgcgc
     8941 caggttgccc agcaaaatac cgattacgcc aaagtcagca tccgagaacg tggtattggc
     9001 gaagccgatc gcgccgagaa ccggcagtaa cagcactggc aggaaagtga ttaatagacc
     9061 attagcaaat gcgccgatca tcgccccgcg gcgaccgccg gtggcattgc caaagacgcc
     9121 tgcggtcgcg ccggtaaaga agtgcggcac aacgccaggc aggattaaca caagcttcat
     9181 ctgtccaagc aggaacagcc ccaccagccc gccgagaaaa ctgaacagga agccaatcag
     9241 taccgcgtta ggggcatagg gatacaccac cgggcagtcc agcgccggac gcgcgtttgg
     9301 caccagtttt tctgaaaagc cggtaaaggc cggaacaatt tccgccagaa tcagacggac
     9361 gccttgcaga atgatgaata cgccggcggc gaaggtgatt gccatgataa tggcgtacac
     9421 cagatagttt tgcccgccgc taaacgtcgc ttcgacatac tcacgccctg cgctgactgc
     9481 catgatcaga tagataatca tcatggtcag cgaaatcgag atagaactgt cgcgtaaaaa
     9541 actgaggttt ttcggcaggt tcatctcttc cgtggagcgg gagcctttac cacacaggct
     9601 gccaatccag ccggaaagca catatcccag ggtaccgaag tgaccaaacg caatgtcatc
     9661 ggtaccggta atccgcctca tataacgttg ggccaacgcc gggaagaagg ccatcaccag
     9721 ccccaggatt agcgatccgg tgaagaccag ccctacgccc tcaaaccccg ccacggtcag
     9781 gattacgcca atcatacagg ccatgtaaaa ggtgtgatgt ccggtcaaaa agatatattt
     9841 aagacgcgta aagcgcgcca cgacaatatt ggccaccata ccaaatgcca taattaacgc
     9901 cgtggacgcg ccatattttt ccagcgcgat tgagactatc gcttcattat taggaataat
     9961 accctgaata ttaaaagcgt gttcaaacat accccctagc gggtttaatg aacccaccag
    10021 tacggttgcg ccaccgccaa gcacaataaa acctaaaatg gttttaatcg tgccttttac
    10081 cacatcggaa aacgcttttt tctgcgccac cagaccaatc agcgcaatta accctacaag
    10141 caccgatggc acttttaaaa tatcaacaac aaaattcagc gtttcaagga taaacatatc
    10201 cacctcgcca gcaataatta ttgtttagcg aaccatgcgc gcagctgcgt ttccagttcg
    10261 ttgatgtcga tgatgttatt gatcaccacc agttggcttt ccggtacgct ggcgctggcc
    10321 gcgatatctt tggccattac aaaaagatcg gcagccccgg gtgtggccga tgagagatcg
    10381 gagtgttcca cttcagcgtc aatattgagt ttctttaata cttttttaat gttcatttct
    10441 accataaaac tactacccag gccggaaccg caaattgcca tgattttcat tattgtcacc
    10501 ttttaaaagt agagttggtc tgcatcacgc acgggcgcaa tgttatttac cgcaagaaaa
    10561 tggaataaaa tcagaaacgg tcaataatcg ttttaatgtc ctccaggttt tttgcctgat
    10621 gtaatttttc catatctaca tcactggaaa ataattccgc cagagccgat atcatttcga
    10681 tatgactgtg cttatcaggc gccgccagca taataatgat gtcaaccgga tcgaattcgt
    10741 ctgcgccaaa tgaaacgccg cgctgtagtt tcagtaacga taaacctaac cctttcgccc
    10801 cctcttccgg cctcgcatgc ggcatcgcta accctggcgc taatacataa tacggcccaa
    10861 gcttttggtg ctgctgaaca atcgccgtaa tgtattccgg tgcgataaca cctgcgtcca
    10921 gcaggggttt gccgcaaatt tccagcgcct gcggccacgt ttccacgctc tcccgtagcg
    10981 tgatggttgc gtcagataac caggttccca gcatgttatt cgcccccacg gtgtatgaaa
    11041 ttatgaacaa actttattca agccattcga tattagctgc gatcgttatc acaaagatag
    11101 cgctaccagc gactattact cagaattgtg atagcgctat caaattaaaa tcatggtgtg
    11161 aaatcacagc aaaaaagcgg atttaaggcg tatactgcca gtcatgcgaa gcaaagaacg
    11221 acaataaaaa agcatctcaa catgttgtaa tgacgcagga atttgtatgt cgataccccg
    11281 taaacggcgc agtaccggta aagtgactat cgccgatgta gcccaacttg ccggtgtagg
    11341 cacgatgacc gtatcacgag ccttacgcac gccggaacag gtctctgata aactccggga
    11401 aaaaatcgaa gcggcagtgc atgagctggg ctatatgcct aatctcgccg ccagcgcgct
    11461 ggcgtctgcc tcctcgcaca ccatcgcgat ggtcgtaccg aaccttgcgg aagcggggtg
    11521 ttctgaaatg ttcgccgggc tgcaacaaat tttacagccc gcaggctacc agataatgct
    11581 ggcggaatcg cagcatcgcg tggaacaaga ggagaagctg ctcgaaacgc tgctggcttc
    11641 caacattgcc gcggcgattc tgcttagcgt cgaacatagc actaccgtgc gccagtggct
    11701 gaaaaatgcc tctatcccgg tgatggagat gggcgcgatt cgcagcgatc ctattgatat
    11761 gaatatcggt attgataacg ttgcagcaat gtatgagctg acggaaatgc tgattcagcg
    11821 cggttaccag aatatcgggc tgctatgcgc caatcaggag cagtggattt ttcagcaaca
    11881 tctgcacggc tggtacaaag cgatgcttcg ccaccatatg tcgccaaacc gggtgattaa
    11941 tgccgccttg ccgcccaatt tttctaccgg cgcgtcgcaa ctgccggagt ttttactagc
    12001 atggccggag ctggacgcgc tggtatgcgt atcggatgag ctggcctgcg gcgcgttata
    12061 cgagtgccaa cgacggcgga tcaaagttcc ggacgattta gcggtggtcg ggtttggcga
    12121 tagcgatgtc agccgggtct gccagccgcc gttaaccacc atggccgtac cgcaccgtaa
    12181 gattggcagt gaagccggac gggcgctgtt ggaaaggtta aatcagggaa actggagcga
    12241 tcgaaaatct atcgcctcca gtttatgtat gcgggaaagc tgctaaaacg cttattccgt
    12301 ctcttccggt ttctcctgaa gcgcggcttc gtttttggcg ttgcgggtca tccacagcgc
    12361 cagcgctttg agcgagtccg gcgtaaattc atcacagcgc gcggtgatct cctccggagt
    12421 cagccaacac acttcgctga cttcatcttc ctgaagcgcg aaaggcccgt gggaaacgca
    12481 gctaaacagc gcgccccaaa cccggcaatg ttggtcttca aagtaaaaca gaccgtgttc
    12541 ggcaaacggc acgcctgcaa tacccaactc ttcttccgct tcgcggcggg cagattccag
    12601 tagctgctca tcagcctgga ccacgccgcc tgcggtagca tctaacatac cgggcaaaaa
    12661 atcttttgtt tcggtacgac gctgcaccag aattttaccc ataccatcat gaacgacgat
    12721 atacgtcgca cgatgccgta agcgttgcgc acgcatctgt tcccggctgg actgtgcaat
    12781 gacttcattg tcttcattca caatatccac ccattccgta cttgccaaac gacgctgttc
    12841 caccatcagg aaaccttctt atttctggcg ctcttacggc gcatttacgt ttgtgaggta
    12901 aattacgagt taattgcaac ctgcgcaatg atactttgat cattgagtgc gattacgctc
    12961 aacacattat catccagaat accgtagctt gctgcatacc cgcctttcgg gatgctcact
    13021 gacccaggat taaagtgata cagtccttcc tgctgttgcg ccaccggcag atgcgtatga
    13081 ccatagacca acacatcgcc agtatgcaga gcgggcagat tcgtcggccc gaagaggtgc
    13141 ccatgcgtta aaaatagccg cctctcttgc gtcaatattt gctgccacgg tgcagttatc
    13201 gggaaatgca gcagcatctg atccacttcg ctatcgcagt tgccgcgcac ggcaatgatt
    13261 tgcgtcgcca ccgcgttcag gcgttcggca acctgggcgg gcgcatagcc ttcaggcagc
    13321 gcattgcgcg gcccgtggtt aaggacatcg cctaatatca ccagccaacg cgcgccgctt
    13381 tgcgcgaacc gctcaagcac gcgttccgtg gcgggtaaag aaccatgaat gtccgatgcg
    13441 aacatcagtt tcatcgctca ctcctcattg tgaaaaacgg cgttatgata ctggaatatg
    13501 aatagatttt cagcctgaac gcttcgagga aagcgcaata aaacgctgta cggaagcacg
    13561 ctgccactga aatgtcgcat acgccgccag cgacgccggc acgtcatcgc catgcagcac
    13621 cagacgattg atcatcaatg ccagatcggt atcggcaatg caccattcac caaataaatt
    13681 ttgcgtcccc tgccccaata gcgcttcagc cgtcgcaaac agttttgccg cactggcttt
    13741 tccagcctcg cttagcggcg cttttttcgc cccggcaaac accacgtcgg taggccgttc
    13801 ttcgcgaagc ggcagtaaat cgctgcgtag ccacgcctga atctgtcgcg cgcgggcgcg
    13861 tttttgtaaa tcgtgcgggt agatacgctc ccactgcggc ggcgcgaaac gctcctccag
    13921 gtattccgca atagcggacg actcgctcag ctcaaaattg tcggcctcaa gcaccgggac
    13981 gcgctgcgtc agcgcatatc cccgccagcc aggttgcaga tgttctccct ggtccagatc
    14041 gcgggttttc agagtaaagg aaagcccttt ttcttgtaat gccacccagg cggacaagac
    14101 gtagggagag aaaaagttcg catccgacca cagcacaata acaggcttac tcataatgtc
    14161 ctcttgaggg cgtattaggt ttcttcccaa aatatagcgt ctttcgcctg ctgtcacctg
    14221 atgaaaactc acacacatca ggaggctttc tatacttaat tcagcccaga ctctttacgc
    14281 acatgcagga gccaaaatga ttgaccttta ctacgccccc acgcccaacg ggcataaaat
    14341 aatgctgttt ctggaagagg cggagctggc gtatcgtttg ctaaaagtag atatcagcaa
    14401 gggcaatcag tttcgccctg attttttggc tatctctccc aataataaaa ttcctgccat
    14461 cgtcgatcac gccccggcag acggcggtca accgcttagt ctttttgaat ccggcgaaat
    14521 tcttctctac ctagcggaaa aaagcggcaa actgcttagc ggggagctgc gtgaacgcca
    14581 taccacgctg caatggctgt tctggcaggt cggcgggtta gggccgatgc tgggccagaa
    14641 tcatcacttt aaccactttg cgccacaggc catcccctat gcgattgaac gctatcaggt
    14701 tgaaacgcaa cgcttataca acgtcctgaa taaacgcctg gaaacctccc cgtggctggg
    14761 cggcgaccac tacagtattg cggatatcgc cagttggccg tgggttaacg cacatcagcg
    14821 tcagcgaatc gatcttgata cttacccggc ggtgtataac tggtttgaac gcattcgcac
    14881 gcgtcctgcg acagcgcgcg cactgttaca agcgcaactg cactgtaaca gtacgaaagc
    14941 gtaacgcggt agcatacatc atgtatgatg tagaggtgta tacacggaaa acctgcgtcc
    15001 ggcaccctta ttcgtattaa aaacctgaca ttagggaaga ggaaatcctc cctactctgg
    15061 aggtcatatg cagattctga ttaccggcgg tacgggcctg atagggcgtc atctcattcc
    15121 ccggctgtta atactggggc accaggtgac ggtcgttacg cgcaatcccg ataacgcgcg
    15181 tcagattctc gattccagag tgacattatg gaaagggctg gcggaacgtg agcacctcaa
    15241 tgagattgat gccatcatca atctggcggg cgaaccgatt gccgacaagc gctggacgtc
    15301 gcaacaaaaa gaacggttgt gccaaagccg ctgggctatc acgcaaaagt tggtggattt
    15361 aattcatgcc agcgctacgc cgccctcggt gttgatatcc ggctccgcca cgggctatta
    15421 cggcgatctg ggcgacgttg tcgtcactga agatgagccg ccgcacaacg aatttacgca
    15481 taaactttgc gcccgctggg aacagattgc ctgtcgtgcg cagagcgacc agacccgcgt
    15541 ctgcctgctg cgtaccggcg ttgtcctggc gccgcaaggc gggattctgg ggaaaatggt
    15601 tccgccgttt cgcctcggac tcggcggtcc ggtgggtaat ggtcggcaat atctggcctg
    15661 gattcacatt gacgatatgg tcaacggcat cctgtggctg ctggataacg atcttcgcgg
    15721 tcccttcaat atggtctcgc cgtatcccgt ccataatgag cagtttgctc atgcgctggg
    15781 tcgcgcgctg cgccgcccgg cgattattcg cattccggcg acggcaattc gcttattgat
    15841 gggagagtcg tcagtgctgg tactgggcgg acagcgggcg ctgccaaaac ggcttgaagc
    15901 cgccggattc gcatttcgct ggtatgattt agaagaggcg ctggcggatg tgattcgcta
    15961 attcccaaag cgccgtatcc tgcccggtaa gcgatgcgcc gccgggcttc ttttatttca
    16021 gcgagccttt caggaattgc tgtaaacgcg ggctttgcgg attgccgaac acctgctccg
    16081 gattgccctc ttcttcaatt ttcccctgat gcagaaaaat cacgtgcgaa gagacatggc
    16141 gggcgaagcc catttcatgc gtgaccacca ccatcgtttt gccttcttcc gccagttgtt
    16201 gcatgatgcg caacacttcg ccgaccagtt caggatcgag cgccgatgtg ggttcatcga
    16261 acagtaaaac gtcaggttcc atcgccagcg cgcgcgcaat agaaacgcgc tgctgttggc
    16321 cgccggagag atggacggga tatttgccct gagcgcgctc atcaatcccc accttcgcca
    16381 gatatttcaa cgcccgctcg cgcgcgtcgt gcttgcttaa tcccagtacc tgaatcggcg
    16441 cttccatcac attttccagc accgtcatgt ggttccagag gttaaagtgc tgaaacacca
    16501 tcgtcaggcg ggtacgcaac aagcgtagct gatttttatc cgccactttg agctgcccgt
    16561 ctttgtcgcg caccagatta atgttctgac cgttcacgat aatcgcgcct tcgctcgatt
    16621 tttcgaggaa gttaatgcag cgcaaaaaag tgcttttacc ggaaccggac gagccgataa
    16681 tgctaatcac atctccggcg cgggcctgca gcgatacccc tttcagcact tcatgaccgc
    16741 cgtagcgttt gtgcaaatcg ataacgtgta atttattttc tgacatcatg ttactcgaat
    16801 tatttagagg acacgtgctg caaccagcgt ctttccgccc ggcggaacag gcttatcagg
    16861 acatacgaaa tgagtaaata caacacggcg gcaatgccaa acgcggtaaa cggctggtaa
    16921 gtcgctgagt taatatcgcg ggcgattttc aacaaatccg gcaccgtcgc ggtaaacgcc
    16981 agcgccgtag agtgcagcat taaaatcact tcgttgctgt aggcaggcaa ggcgatgcgt
    17041 aatgccgacg gcaaaataat gcagcgatac attttaaatg acgagaagcc atacgctctt
    17101 gccgcttcaa tttcaccgtg cggtaccgaa cgaatcgctc cggcgaaaat ctccgtagtg
    17161 tatgcgcagg tattcagcgt cagcgccagt acggtacagt tcagtccgct gcggaaaaac
    17221 gcgttaagaa gatcggtgcc tttgactatc tccagcgtat acatccccga atagaacacc
    17281 agtagctgta cgtacagcgg cgtgccgcga aaaatatacg taaacagcca gatgggaaaa
    17341 cggatgaatt tattactgga aacgcgaccc accgccagaa tcaccgccag aagaccgccc
    17401 atcaccaccg atgaaattaa caaccacagc gtaatcgcca cgcctgtaaa acgatagcca
    17461 tccgtccaca gcagggattt ccagtactcc tgaatgatct caatcacaaa tcggccctct
    17521 tcacgcctac ggaatagcga cgctcaagta agagcagcac accattggaa acggtggtaa
    17581 ataccaggta gataagtcca cagaccacgg caaaatagaa aggctcccag gtgcttttac
    17641 cggcaagctg cgtggctttg acgacatctt ccaggcccag cagcgacacc agcgctgtcg
    17701 ctttgagtat cacctgccag ttattgccga tccccggcag ggcgtaacgc atcatcgccg
    17761 ggaacataat ccgccggaag gtttgcccgt gggtaaaacc aaaggccgtc gccgcctcga
    17821 tatggccttt cggtaccgcc ataaacgcgc cgcgaaaggt ttcggtaaaa taggcgccgt
    17881 agatgaaacc aagggtgata ataccggcca ccatcggatc aatatctatc tggtcgatac
    17941 ccagcgaatc ggtcaccacg ttaagcgcga tttgcaatcc gtaaaatatc agcagcatta
    18001 ataccagatc cggcaccccg cgaatcaggg tggtgtaccc ttcaaaaata agccccgtta
    18061 cccggttttg cgaaagcttc gcccccgcgc cgacgagacc gataagcacg gccagcacca
    18121 cggaactgag cgccagttcc agcgtgacga tcgcgccctg taaaattacg cctgaaaacc
    18181 cgtacaacat gcagcctgtc ctgttgtgtg tggtgaagta agaagcctct tttgcatttt
    18241 tgcctcacat cacgccggat ggcggctgtg ccttgcccgg cctacgatgc tccccgtagg
    18301 cctgacgcgc acagcgccct caggcaatgc agacagtcaa tattctttgg gctttatctg
    18361 caccgacggt gattaaccgc cataaacatc aaaatcaaag tactttttcg ccaacttttc
    18421 gtaagtaccg tcagcacgca tttcagcaaa ggctttgttc agcgcttcgc gcagctcgtt
    18481 atcctctttg cgcagcccca taccggttcc tacgccgaat aacttctcat ctttcaccgc
    18541 cgggccgccg aatttatagt cttttccgat gggctgttta aggaaacctt cgctggccgc
    18601 gacctcgtcc tggaacgccg catcaatacg gccagccgtc aggtcggaat aaatgttgtc
    18661 ctgcccctgg taagagacga tctcaatccc tttcggcgcc cagtgctcat tgccgaaggt
    18721 ctcctgcgtc gtcccctgta gcacgccgac gcgcttgcct ttcagcgacg cgacggtcgg
    18781 ctgaatatca gagttcttcg ccaccaccag acgggaatca gcggcgtaaa gcttgtcggt
    18841 aaacgcgatt tcctgctggc gcttttcagt gatggacagc gaggacatga tggcatcaat
    18901 tttcttcgct tttaaagacg gaatcagcgc atccagcggg ttttccacga acgtacactg
    18961 tgtgttgata cggttgcaca gttctttggc cagatcgata tcaaagccga ccaattcacc
    19021 ttgtgcattt ttggattcaa acggtgcgta tgtaggatcg gtaccgatgc gaatcttttg
    19081 tggaatagcg gcaaatgctg cggtagcgct ggaaaatgcc agcaccagag aaagggataa
    19141 cgccagtttt ttcataacta tcctcaacag actgtctttc caggagatct ttacagatcc
    19201 gatgcgacta tcgtgccatt aatcaggccg acaaggcaaa gcattctacc ttgtcagccg
    19261 gtttattttg cataaaaatc gattaagtat gcatttatgc gcctgttccg caacggctta
    19321 tgcaccaaaa aggtgcaaaa catctatttt gcaccgtgat agttccccag cgcggcgcgt
    19381 tatccccttc cctcaatcgc cgtagacatt aaaatcgaag tactttttgg ccattttgtc
    19441 gtaagttccg tcctggcgca gttcggtcag cgctttatca aacgcggctt ttagctcggt
    19501 atcgtctttg cgcagcccaa cccccgtccc gtcgccaaaa tattttttat ccttcacgga
    19561 aggaccggca aacgcatact ctttgcccgc tggctgcttc aggaaacctt cgctggcggc
    19621 gacttcatcc tgcaatgcgg catccagacg accggcggtt aaatcggaat agataagatc
    19681 ctggttggca taagccacca catccacacc tttagtgcgc cagttatcat tggcgtaagc
    19741 ctcttgcgtg gacccttgca gcacgccgac atgcttgcct ttcagcgatt ccagcgtcgg
    19801 ctgaatggga gacccttttg ccgcaatcag gcgtgaatcc gccgcgtaaa gtttgtcgga
    19861 aaacgcaatt tcttgctggc gtttatcggt aatagagagc gatgaaataa tggcatcgat
    19921 ttttttcgct tttagtgagg gaataagcgc atcaaagtcg ctggcgaccc aggtacattt
    19981 cacctgcata cgcttacaca tttcattacc gagatcgata tcaaagccaa taaagtcgcc
    20041 tttggcatct ttcgatgaga aaggcgcgta ggtggtatct gttccaatac gaaccgtttg
    20101 cgggagcgcg gcgtaactgg ccgccgtcgc gcccagacct atcagcaaag acaaagcgag
    20161 aacggtcttc ttcatacata cccctcaagt ggcgtcattt tcttatgttt tacgtggcgt
    20221 tgtgtgtttg cagacttttt catgcaggtc ttatgccatt ttcacgtcag caaaacgatt
    20281 cgacgttaaa tttgttaata aaacgttgca atattgtcct gatgttgaag atagcaggta
    20341 tgacggttga accgcagcgt ttcggcggct tttaacgaat taaatgttga ggatatgatc
    20401 gcggttacaa aattgccctg aaacagggca acagggacaa taatgcacgc taaacagaca
    20461 acgctatgcg ccctgccagc gaacaaaaag gtcgtgcgga agggggatgt caaattgatc
    20521 caacactcgg ttaaccgttt gatttataac atcatctaac gtctgaggaa ggtgataaaa
    20581 agccggaacc ggcggcataa tcaccgcgcc tatctcagcg gcctgggtca ttaaacgcaa
    20641 atgcccgata tgcagcggcg tttcgcgcac acacagcacc agaggtcgcc gctcttttaa
    20701 tatcacatcc gccgcgcggg taagcagtcc gtcagtataa ctgtggacaa tccccgacag
    20761 cgttttaatc gaacagggca ggataaccat tcctgccgtc gggtaagagc cggaggaaat
    20821 gctggcggca atgtcgcgcg catcgtgcgt cacatcggcc agcgcctgca cctcgcgcag
    20881 cgaaaaatgg gtctccagcg ccagcgtttg ccgggccgcc tggctcatca ccagatgcgt
    20941 ttccacgcta tcgacatcgc gcaaaatttg taataagcgc acgccataaa tcgctccgct
    21001 ggcgccgcta atacctacaa tgagtcgttt catgtcctct taccgtttac gagcgccgtt
    21061 catcccactg tgttacgtaa ccggctcaaa gtgggtctga agagatacca tgacaaaaga
    21121 atccctatca taaaagccag ctcaaccaac attatcacta ctccctgctc actaaactag
    21181 gtgccgacca taatggcaaa attggtgata atgacaaatc gggccgtcca gggaaaaagc
    21241 ggcgatcgat agcgtagcaa atcgctggcg tacgtgccat tacgcaccga ttgtcggaag
    21301 cgatactggc accatccgat ggttatccat gccaggcaac ccacctgccc ggtactggcg
    21361 atcagatata aataaaattg ctgtgcggga atatagcggg tcagcaacga caccaacgcc
    21421 agcaaggccg tgattaaaat agcatacacc ggcacgccgc cgccgttcgt tttaccaaag
    21481 caggctggcg caaagcgatc gcccgccata gaccacagca tacgcgaact ggcgtaaatg
    21541 gccgagttag cggcagaaac cgcggcggaa aagatcacca gcgtcatcag cgtatccgcc
    21601 cccggaatgc ccgcgtggga gaatacccat acaaagggac tttgtccatt tggcgtcagt
    21661 tcatgcggat agaccagcgc cagcaccgca atcgccaggc cgtaaaacaa aatgattctg
    21721 agaccgatcc ccaggatcac cttcggtaaa ataatgtgcg gcgattcggt ctcccctgcc
    21781 gcatttccga ccagttccac cccctggaag gagtaaatca cgatcgtcat acagaccaca
    21841 atttgctccc aaccgtgggg aaaccacatt ccgtctgttt ttaacgtcgg gtgccagtca
    21901 ctatggccca ttagcgagta gatcatgacc ccgcccgcgc agataaacag cacgatcgcg
    21961 aagaccttaa tggccgaaag ccagtattcg cattcgccaa aactttttgc ggaggtgaga
    22021 ttgatagccg tcaggatgag cagaatcgcc aggcagaaca tatataccgg aaccgcgggg
    22081 aaaaactggt gagcaataaa ccctgcggca gtgaggtcgg ctgccaggga aaagacccag
    22141 ctaaaccagt aaagccagcc aatggtatag ctccagcaag gtgacggcat aaacatcagc
    22201 gcgtaatgtt gaaatgaacc ggagtgagga aaggcgcatg ataattcgcc aagacacatc
    22261 atcgtcgcca gcataatggt tccggcaaac agataggcca gtaaggttcc cgccggcccg
    22321 acgctgctta acggttcggc aatgccgata aataagccgg tgccaatcgt gccgcccagc
    22381 gacatcatca gcaggtgccg cttcttcagg ttacgccgca gaccgccttc aggctctgct
    22441 ggcggagatt gttgcagggt atccatcgtt actccctgtc tttcgtgagg tcaaagatgc
    22501 cgccgcgaca tagccgcggc ggttatgcgt taacgcgtaa acctccaggc gacgcctttg
    22561 gtctggcagg ccattaacag gcccgtataa tccagctcaa agcgaaccac atcgcctact
    22621 tttagcgact gacgacaatc ttcaatatcc accagcgtat gatcgctggt ttgccctaag
    22681 atagtgatag cgtcgtcgca tggcacacag ttatccgacg gcacatcctg acgaccaaac
    22741 gccagcaatg cgcgtcggcg tatgccacga tcgacaaagg ttttactttg caaaaaggca
    22801 tcgacgccca gctccccgac cgggacggtc ggtttactgt tcagttcgat gatttccgct
    22861 tccaggatat acatatcgga acaggcttta tcgaccggtt ttgcggagtg gtgaaattca
    22921 ttcaggtatt tcatgtccac atattcaatg ccgaattcat gcagtccgcc gatgcgcaga
    22981 tgattcagtc cctgcggcca gataccttta tccagcaggt gatagctggt gcagtttccc
    23041 gcagaaagcc gccggacagg aataccgctg tcagcttcca gccgggcggc cagcgccaga
    23101 aaatcctcgc cattttttac cgttggcaac acggtgccgt aacaattaaa gttggtgccc
    23161 agtccatata attccagacc gggcagacca gtaatcagag tcacggtctc aagaatgcgt
    23221 tgatattcac caaaccagat accctcgcgt aaatcgccca tatccaccat cagtaatacc
    23281 tgatgcgttt tcccctggcg ttgggcttct tgcgataatg cccgtaatac caccggctcg
    23341 ctatttaaac taatatccgc gtagcgcacc acatcttcga tttcactcag acacgggctg
    23401 cgtaacaggc aggtcgtaca tcctgtctcg cgtatttttt tcaaattata ggttcgtgat
    23461 tcagcaataa cggtaattcc gccgtttaac accgcctgcg cggtttccac gcagccgtca
    23521 aaaactttat tgacagccat cacgtcaata ccgctgcttg ccagcagagc tttttccgtg
    23581 cgtgcgtttt cttccagctt gcgtagattt atttccagaa ctggcatata cattttattt
    23641 tcctcccgcc atgcttaaac gggcattacg tttctgcgcc cgatggtaaa tgtactccgc
    23701 gacgacaacc gccagcacgg ctccgccaat aattttcccg gcgtactgga aatatccgcc
    23761 catatcaatt tgagaaggcg gaataaataa cagcgcaacg gcaaaggcga tagaaagaaa
    23821 gcccagcgcg ggtaaaatag ccggtaaaac cttgcccgga attttaaaac ttcttggcgt
    23881 atctggctga gtcttacgta aacgccagaa cgccgggaac atcaccagat aaggaataaa
    23941 ataggtgatg gtcgttagcg ccgttaacat ccagtaagcc gccgcaacgc ttggcgaaat
    24001 aaaagtcgaa aaacacagga ccgtgacaat aatcgcctgt atagtcaagg caaaggcggg
    24061 cgttttccac accggatgta atttgccgat tcggtccccc agcagattat cttcacgcga
    24121 ggcttcctgg agcatataaa tcggccccac cagccaggag ttaatctgcc cgagagcgcc
    24181 aaaaaacata cagatggcca taacaggaat taaccacggc atatgcagcg tgtccgcagc
    24241 agcatgcata gcctgcatga cgcctgccac gatgtcggtt ttcccggcgg gtaaaagcgt
    24301 atttagcgcc caggtgccga ccatatagat cccaacgata acggcggcag agacggccat
    24361 cgctcgcgga aaatcacgct gtggattacg ggtacgcccg gcaatcatcg gggcgacctc
    24421 cagtccggca aacgcaaaca tcatgctgga taagaaaacg atcgtatccc agtgtccgag
    24481 atccggaatc cagtttttcg ctgtagtgta gtccgtctgc atctggtgtc cggtacatag
    24541 ccataccacc gccagcaaaa tgaggatggc ggagggaata aatacgccgc accaggcgct
    24601 gatgctatta ataatttttg tccattccat cccgcggata ttcatcagcg ttaatagcca
    24661 gaaaattacc gcggaaccaa taccgataaa cgctttattt tccgccaggc cgccgccgat
    24721 catatagccc aacgcggtaa agccgaattg cagcattaat gggaaaaaca gtacgcagga
    24781 aaagagaaaa caaaccacga caatccatgc aatacgttta ccaaatgcct ctttaatcca
    24841 gacaaatatc ccgccatctt tcggccagcc ggttgacagc tcgccgcata ccatcgctaa
    24901 aggaaaaaac aagcagaatg cggctatcac ccatagcaac atggccgatg ccccgtaagg
    24961 cgccacgtta gggatttgcc gcaaactcag aatagcgatg acattcataa agacaatgtc
    25021 tttgatgcca agtaagccag aattcgtgtt actcatggcc atctcctgtt atgcattcag
    25081 gcatcactgc cctcttctta tcatctgacg acgggcttca gcatgaaact gaagcccaaa
    25141 acagtattaa taaatgtcgt acttgaccat atcttcgtaa ctgtcttccc gacgaatcag
    25201 acgcgtctca ccatttttat cgatcatcac cacccccgtg cgcggacggt tgttataaac
    25261 ggtttgactt tcaatggtgt atgccccggc atcaagaaac gcgacaatat cgccaacatg
    25321 agtctccttc ggcagtaaaa actcttcgcc tttcactccc atgtggaaat aatccccgcc
    25381 atcacacagc ggcccggcta attttatcca ggcgtcgtgc gctgccgtca tgcgagaggc
    25441 gttatagaca taaaagaacc agtcaaaatg ctggctatca gagagtacgc tgtaaccagc
    25501 atcgacaaat ttccattcaa cgtggcattc cacattgccg ttaagatcgt aatttgtttt
    25561 acgtttttcg caggagactt ccgtcagtaa aaccgccgcc gacccggtca ctttacgtcc
    25621 cggttcaata catatttcca catcggtacg ccatttatgc acttcgcgaa tgaccgcatc
    25681 ggcaaaatcc tgggcggtaa taccggcata catattatct tttaacgggt cgccattctc
    25741 gtcgtcatat ttatagggaa ccggaattcc gccgcccacg ttgatcaaat caaatttaat
    25801 accgagcacc tcttccaggc gacgggattc atccaccagc actttagtcg cttttgcgaa
    25861 aggctctgac tccggcacct gatcgcccac atgcatatgc aagccgcgta aatgcacata
    25921 aggcatcgcc agaatgcggc ggcaggtttc ttccgcctgt tccaggtcga gacccgactt
    25981 cgcatggaaa gcggtaacca gttccgcatg cgtcgccgag ggaacattcg gctctacgcg
    26041 gacgcaaaca ttggcgactt tcttcagctt gcgagagatg gcatcaatat gttccagctc
    26101 atacaggcta tcaacattaa taagatacag atcgttggcg atggcatatt ccagatcggc
    26161 aggctttttc accacgccgt tgaagacgat ctgatcgccg cgaaagccta tctccaggca
    26221 cttgcgaacc tcatattgtg agtttgcctc cgcgcaaatt ccggcgtcac gaatggcttt
    26281 caacaccccc atgaccgagc aggtttttga cgcaaagaag gttttggtat ttttatgcgc
    26341 cgcaaatgcc tgctggattt catgaatgtt acgaataatc tccggctcag aaaacacata
    26401 gaacggcgtg gggtactggc gcgccagagc gtccagatcg accccttcaa aacacaaatg
    26461 accgtctttg tgctggaaac ggcgatcgcc gttgattacc tgctcacgta gctggttgta
    26521 attctgcata atcgagtcag tcataacgcc ctctgcttaa tgtttatggt aaaaatccgc
    26581 attctttaca gggataaagc aaaaggcatg ccactatttt ttatcaaaat aatcaattat
    26641 ttataaaaat aagctgtttc tcattttcgt cattaagttt gctattcatc ataacgacga
    26701 aaattcgtca tttttataat ggcaacatga acaatagata tgaggaatgc atgtatggca
    26761 tccaccaatc aggaactggc ctcggcgctc aggatgtttt cccgcttttt cgatttgatt
    26821 catcagccgt tggccgtcat taatgagcgt ggtgaatacg tttactacaa tcaggaaagc
    26881 gcggatctgg acggctacag cattgaacgg gcaatgggaa aacatatgct ggatgtctat
    26941 ccgggcatga aagaaaccca aagtacgatg ctttcatcgt taaaaaaagg cgtggaatac
    27001 attggccatt atcaaattta ttacaatgcg cgaggccagg ccgttgacta tcagcacacc
    27061 accgcgtcgc tctatgcaag cgatggcggc atggtcggcg ttatcgaaat cggcaggaat
    27121 atgtccggcg tcaggcggct ccaggagcag gtggtagaac tgaaccaact gctgtatgcc
    27181 gatcaccatg agaagcacca tgccattatt accgaaaatc cggaaatgct cagtaatatc
    27241 gccaaagcca aacggctggc cgccagtaat attccggtga cgattgtcgg ggagacggga
    27301 acgggtaagg agctattttc ccgcctgata catcaatgca gcaagcgggc gaataagcca
    27361 tttatcgccc tgaactgcgg cgctctaccg cctacgctta tcgaaagtac gcttttcggc
    27421 accgtgcgcg gcgcctatac cggcgcggaa aatagccagg gctatctgga actggcaaac
    27481 gggggaacgc tctttcttga tgagctgaac gccatgccga tagaaatgca aagtaagctg
    27541 ctgcgattct tgcaggataa aaccttctgg cggctcggcg gacaacagca actccactct
    27601 gatgtcagga tcgttgccgc catgaacgaa gcgcccgtca aattaattca acaagaacgc
    27661 ctgcgggcag atctttttta tcggttgagc gtcggaatgt tgacgttacc gccgttgcgc
    27721 gcccgcccgg aagatatccc cttactggcg aattatttta ttgataaata ccgtaatgac
    27781 gtgccgcagg acattcacgg attaagcgag acggcgcgtg ctgatctgct caatcacgcc
    27841 tggccgggta atgtcaggat gctggaaaac gcgattgtac gcagcatgat catgcaggaa
    27901 aaagacgggc tgctgaaaca catcattttt gaacaggacg agttaaattt aggcgtaccg
    27961 gaaaccgcgc cggagaatcc ccttccctcg tcacccgatc cgcagtatga agggtcgctg
    28021 gaggtacggg ttgccaacta cgaaaggcat ttaatagaaa ccgcgctgga tacgcatcag
    28081 gggaacattg ccgccgcggc ccgtagcctt aacgtatccc gcaccacgtt acagtacaaa
    28141 gtacaaaaat acgctattcg cttcggcgtg gtgcgtaatt gacatcggcc agcggcatcg
    28201 cgccgctggc aaagccatta gccttcgtta tgcatttcca agttttccat ttcgttctgg
    28261 aacagcaccg ctttggcgtc gtcattacgt aatgaatcca ggaagtcgag gtattgctgg
    28321 tctacgtctt tggtgacata taccccgtta aataccgaac attcaaactg ctggatatcc
    28381 gggttttctg cgcgtacggc ttcgatcaga tcgttcagat cctggaagat aagcccgtct
    28441 gcgccgatga tctgccgaat ctcatccacc tcgcgaccat gcgcgatcag ctcattggcg
    28501 gtcggcatat caatgccata gacgttgggg aaacgaattt ccggcgcggc ggacgccaga
    28561 taaaccttct tcgcgccagc ttcccgggcc atctcgatga tctgctctga tgtggtgcca
    28621 cgcacgatgg aatcatccac cagcaggacg ttcttatcgc ggaattccgc gcgattagca
    28681 ttgagcttac ggcgcacgga tttacggcgt agctgttggc ccggcatgat aaaggtacgt
    28741 cccacgtaac gatttttgac aaatccctgg cggtacggct tgccgagaat acgggcaatt
    28801 tccagggcga tatcgcagga ggtttccggg atagggatca cgacgtcgat gtccagatct
    28861 tcccattcac gagcgatttt ttcgccaagt ttggtgccca tattcacacg agcgctgtag
    28921 acggagattt tgtcgataaa ggagtccggg cgagcaaaat aaacgtactc gaacagacag
    28981 gggttactga ccggattatc cgcgcactgg cgcgtgaaca gttgcccctt ttcggtaata
    29041 tagatagctt cgcctggcgc aacatcgcgc aggaattcaa agcccagcgt atccagcgcc
    29101 acgctttcag aagcgaccat atactccgta cgaccatcgc caacgtcacg cttgcccagc
    29161 actaacgggc gaatgccgtg cggatcgcga aaagccacca tgccgtggcc gataatcatc
    29221 gctacgcagg cataggcgcc gcggatttga cggttagtcg cggcaatcgc ggcaaaaata
    29281 ttgtcggctt ccagcggata gtgacggaag ctgtcgagct cgctggcgaa aatattgagc
    29341 aggatttcgg aatcggaggt ggtgttgata tgacggcgct tttcttcaaa cagcttttta
    29401 cgtagctcgt gcgcattagt caggttgcca ttatgggcca acgtgatgcc atacggcgag
    29461 ttaacgtaaa aaggttgcgc ttccgaagcg ctggagctgc ctgcggtagg gtagcgcaca
    29521 tggccgatcc ccatgttgcc ctgcaaacgc tgcatgtggc gagcttcaaa aatatcgttc
    29581 accagcccgt ttgccttacg caagcggaag cagttattcg catcaatggt gatgataccg
    29641 gcagcatcct gaccacgatg ctggagcact gttaacgcgt cataaatcga ctggttgacc
    29701 ggcataacac cggagatacc gacaataccg cacatacgtc attttcctcg ttaagccaca
    29761 tctcagaacc tgttacgtcc tgggcaagaa actcgacgag ctttgcagat agtcaaagaa
    29821 ccatctgatg atgaagctga actgcgggat gagctgcgat ttgctccagt cttcgctttt
    29881 cgacaagccg gtaaaggtat caaggaagaa cagaatggcg gcgacaatca gcgcgcctcg
    29941 cagtgcgccg aaacagatcc ccaacacccg gtcagttccc gacaggccgg tcttttctac
    30001 tagctgacct atcacaaaat tcacgatagc gccgacgata agcgtcgcga taaacagtac
    30061 cgcgatagca atcccattac gaaccagttc gtcttcaaag cccgtaaacc agacagacag
    30121 gtaagtgtag tagtgactgg cgacaaagaa agcacaaccc cacgtcacca gcgataacgc
    30181 ttcacgaaca aagccgcgga tcaggctaac cagacaggaa aaagcaatca ccgcgataat
    30241 ggcgtaatca atccagacca tagatgtccc acgattttac gccctgtcgt cctgttcggg
    30301 gcgcattcta acagaaaaag aaaacgtttg cgtagggatt tccttcccac gcgtaaataa
    30361 aaatggcgct gaaaaaatat tcaacgccat cacacttttt atctcttcgg gcacgaccag
    30421 aagagctgcc atcggcctga taagcgcagg atacccggtt tattccttct gccggatggc
    30481 ggcgtaaacg ccttatccag cctacagaac ttcggctatt accagatgaa caccgtaggc
    30541 cttaacgctg cgcgctcagg caaaacgcgc cttagttcgg gctatatccc atcaccacgc
    30601 cgcttaaccc ggaaatctgc ttgagctcgc caagcgatcc tttcatctta tctttcgacg
    30661 catccggccc gacgagaata cgggttattt taccctgtac cggcgttgag ggggaagtat
    30721 aaacccggaa cccggcggaa cgaagcttgc cgactatctc gttgacttta tccgcgtttt
    30781 tcagcgcgcc caactgtacg acataggctt tgccggtcgg cgcaggttta tcgtcggtag
    30841 ccggttgcgg cgcgggcgtc ggcgtggaaa cggcgacaac cggctgtt
//
LOCUS       DAGWFR010000029        30714 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.029, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000029 DAGWFR010000000
VERSION     DAGWFR010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 30714)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30714)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30714
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.029"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            392..1516
                     /gene="sopF"
                     /locus_tag="MOX77_001436"
     CDS             392..1516
                     /gene="sopF"
                     /locus_tag="MOX77_001436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector SopF"
                     /protein_id="HCA3357011.1"
                     /translation="MLKPIFYSGSVKVPECLETDKEKNVGRTPLSSDIQQIKNVVEDI
                     PPFPESRAVGGSVSAAYRLSFDEVFCGLSNEERKKVYGRLFGKQVLAHIHSRCQRDAD
                     IIREKALRRISRECGTEIDCALLLNKMVDILQNARLTINFNAAKIDFVSLLKNKEYLN
                     SYALGCRPGDLPAYNVGRDSVETKAFELEKLADSPYAPYGQTGGFSVAYTPNSKTFSP
                     TSRPIYAALDFLNGENGGASAYGKSFFELNDNVKTNCTFSPFDIYGHRFGLDTSKLST
                     FCHMENLIASCQNDFFGYNCFKSLVKMAKGEKFLAHSNYGTGYEGNYIEAHIHGDVCL
                     FRDIKHVYLSLQENSYSESQLYDYAKQINQALNRDCIILY"
     gene            2557..2970
                     /locus_tag="MOX77_001437"
     CDS             2557..2970
                     /locus_tag="MOX77_001437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000275699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="subtilase cytotoxin subunit B"
                     /protein_id="HCA3357012.1"
                     /translation="MYMSKYVPVYTLLILIYSFNASAEWTGDNTNAYYSDEVISELHV
                     GQIDTSPYFCIKTVKANGSGTPVVACAVSKQSIWAPSFKELLDQARYFYSTGQSVRIH
                     VQKNIWTYPLFVNTFSANALVGLSSCSATQCFGPK"
     gene            2987..3715
                     /gene="artA"
                     /locus_tag="MOX77_001438"
     CDS             2987..3715
                     /gene="artA"
                     /locus_tag="MOX77_001438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011233073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pertussis-like toxin subunit ArtA"
                     /protein_id="HCA3357013.1"
                     /translation="MKKLIFLTLSIVSFNNYAVDFVYRVDSTPPDVIFRDGFSLLGYN
                     RNFQQFISGRSCSGGSSDSRYIATTSSVNQTYAIARAYYSRSTFKGNLYRYQIRADNN
                     FYSLLPSITYLETQGGHFNAYEKTMMRLQREYVSTLSILPENIQKAVALVYDSATGLV
                     KDGVSTMNASYLGLSTTSNPGVIPFLPEPQTYTQQRIDAFGPLISSCFSIGSVCHSHR
                     GQRADVYNMSFYDARPVIELILSK"
     gene            3907..4449
                     /locus_tag="MOX77_001439"
     CDS             3907..4449
                     /locus_tag="MOX77_001439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012016429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 108 protein"
                     /protein_id="HCA3357014.1"
                     /translation="MTKDEIFAAILSREGGYVDHPDDRGGPTHWGITLTTARANGYMG
                     DMRNLTRNQALKILEADYWYGPRLDQVAIISHSIAAELCDTGVNMGPSIPIKYFQRWL
                     NVFNDQQKIYPDLIADGQIGPRTLSALTFFLSHRRDEGEMILIRALNCSQGQRYLELA
                     EKRQANESFVYGWIKERVRL"
     gene            complement(4597..4974)
                     /locus_tag="MOX77_001440"
     CDS             complement(4597..4974)
                     /locus_tag="MOX77_001440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001277616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1353 domain-containing protein"
                     /protein_id="HCA3357015.1"
                     /translation="MSCFTSPAIMEMLGHYKWRVYEPFRFYLSEDKNDVIEVPVGFVT
                     DLATVPRIFWSLLPPDGEYAKAAIIHDYLYHYPLRNRKESDLIFLDGMKVLGVPKWKR
                     IIMYLAVRIFGWKYYHSHTIQHN"
     gene            complement(5047..5856)
                     /gene="cdtB"
                     /locus_tag="MOX77_001441"
     CDS             complement(5047..5856)
                     /gene="cdtB"
                     /locus_tag="MOX77_001441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001529135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytolethal distending toxin S-CDT"
                     /protein_id="HCA3357016.1"
                     /translation="MKKPVFFLLTMIICSYISFACANISDYKVMTWNLQGSSASTESK
                     WNVNVRQLLSGTAGVDILMVQEAGAVPTSAVPTGRHIQPFGVGIPIDEYTWNLGTTSR
                     QDIRYIYHSAIDVGARRVNLAIVSRQRADNVYVLRPTTVASRPVIGIGLGNDVFLTAH
                     ALASGGPDAAAIVRVTINFFRQPQMRHLSWFLAGDFNRSPDRLENDLMTEHLERVVAV
                     LAPTEPTQIGGGILDYGVIVDRAPYSQRVEALRNPQLASDHYPVAFLARSC"
     gene            6353..6517
                     /locus_tag="MOX77_001442"
     CDS             6353..6517
                     /locus_tag="MOX77_001442"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357017.1"
                     /translation="MNKKTKQINGYILNGYNSVRPHHYNGALTPEESENRYRFYCKTV
                     TNSVDAQQNV"
     gene            complement(6729..6968)
                     /gene="msgA"
                     /locus_tag="MOX77_001443"
     CDS             complement(6729..6968)
                     /gene="msgA"
                     /locus_tag="MOX77_001443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence protein MsgA"
                     /protein_id="HCA3357018.1"
                     /translation="MFVELVYDKRNVEGLPSAREIILNELTKRVHQLFPDAQVKVKPM
                     QANALNSDCTKTEKERLHRMLEEMFEEADMWLVAE"
     gene            complement(7159..7680)
                     /locus_tag="MOX77_001444"
     CDS             complement(7159..7680)
                     /locus_tag="MOX77_001444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ricin-type beta-trefoil lectin domain protein"
                     /protein_id="HCA3357019.1"
                     /translation="MTLLSGKNTLVLCLSSILCGCTTNGLPAPYSINLSFPVITQNQI
                     NSGGYYINDAEQIRTTDGLCLDTGPDQQNRLTLRECKHVQSQLFSFHRDRITQGEKCL
                     DAAGQGTKEGTPIILYSCTGNDNQRWLTDDNKIKGKQSRKCLGTNSIIVRKGDPVVLA
                     DCDFSRALEFTIR"
     gene            complement(8098..8310)
                     /gene="cspF"
                     /locus_tag="MOX77_001445"
     CDS             complement(8098..8310)
                     /gene="cspF"
                     /locus_tag="MOX77_001445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock-like protein CspF"
                     /protein_id="HCA3357020.1"
                     /translation="MSRKMTGIVKTFDCKSGKGLITPSDGRKDVQVHISACRQHETEA
                     LIPGIRVEFCRINGLRGPTAANVYLS"
     gene            complement(8442..8705)
                     /gene="pagD"
                     /locus_tag="MOX77_001446"
     CDS             complement(8442..8705)
                     /gene="pagD"
                     /locus_tag="MOX77_001446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence protein PagD"
                     /protein_id="HCA3357021.1"
                     /translation="MKHHAFMLWSLLIFSFHVLASSDHCSGLQQASWEIFIYDFGSKT
                     PQPPTNTDKKQARQISSPSCPTAKPMMSAPTNDARKGNTFSRT"
     gene            9510..10067
                     /gene="pagC"
                     /locus_tag="MOX77_001447"
     CDS             9510..10067
                     /gene="pagC"
                     /locus_tag="MOX77_001447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence membrane protein PagC"
                     /protein_id="HCA3357022.1"
                     /translation="MKNIILSTLVITTSVLVVNVAQADTNAFSVGYAQSKVQDFKNIR
                     GVNVKYRYEDDSPVSFISSLSYLYGDSQDSGSIESEGIHYHDKFEVKYGSLMVGPAYR
                     LSDNFSLYALAGVGTVKATFKEHATQDGDSFSNKISSRKTGFAWGAGVQMNPLENIVV
                     DVGYEGSNISSTKINGFNVGIGYRF"
     gene            10472..10548
                     /locus_tag="MOX77_001448"
     tRNA            10472..10548
                     /locus_tag="MOX77_001448"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10506..10508,aa:Arg,seq:cct)
     gene            complement(11301..11645)
                     /locus_tag="MOX77_001449"
     CDS             complement(11301..11645)
                     /locus_tag="MOX77_001449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type lysozyme inhibitor"
                     /protein_id="HCA3357023.1"
                     /translation="MMKRKLIPFTLFLAALSASTTSIAASQEISKSIYTCNDNQVMEV
                     IYVNTEAGNAYAIISQVNEMIPMRLMKMASGANYEAIDKNYTYKLYTKGKTAKLVEGD
                     DKPVLSNCSLAN"
     gene            12023..12148
                     /locus_tag="MOX77_001450"
     CDS             12023..12148
                     /locus_tag="MOX77_001450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001748351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HCA3357024.1"
                     /translation="MKKWLIGGILIASFLTGCLMWHNIDKWFNKDIEVFYAGDDN"
     gene            12348..12575
                     /locus_tag="MOX77_001451"
     CDS             12348..12575
                     /locus_tag="MOX77_001451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357025.1"
                     /translation="MLLVGLPPVAEKDNDDVTVAETDEYDDREFYFWRPYFLPKGRPK
                     AALGLIMEKGVGHCHNQPVYTNVIDNHYQLW"
     gene            12773..13240
                     /locus_tag="MOX77_001452"
     CDS             12773..13240
                     /locus_tag="MOX77_001452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20 family protein"
                     /protein_id="HCA3357026.1"
                     /translation="MALRTLSALPVFADSLFSDRFNRIDRLFSQLTGDTPVAATPAYD
                     LQKRDANNYLLTVSVPGWKEEELEIETVGGNLNITGKHTEETVEDQTHWIYRGIRKAD
                     FQLSFSLPEHAKVNNAKLEQGLLLVEIYQEIPESEKPKKIAIESKPKAIEHKS"
     gene            13579..14622
                     /locus_tag="MOX77_001453"
     CDS             13579..14622
                     /locus_tag="MOX77_001453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exo-alpha-sialidase"
                     /protein_id="HCA3357027.1"
                     /translation="MKLALVNRQVILPESGTESFQCHASTLVRLPCGTLVAAWFAGLC
                     EGSEDTAIWLSRYEHNIWTTPQRVAAREGEAHWNPVLFYPSDKLWLFYKVGSGVHVWK
                     TWFITSSDRGFTWSTPAPLVNDDILPRGPVKNKLLLASNGAWIAPGSIESPERWRAFV
                     DRSSDEGKHWNISFVPLEPDNAISGTNVALWDGVKKGMLWECCLENLLRWDGVIQPTL
                     WESSPGHIHMLLRSTRGAIFRSDSIDYGATWSVARATFLPNNNSGIDLVSMQDGTLIL
                     ALNPVNGNWGKRYPLSLIASQDNGESWLPLLDLESDHGEYSYPAIISKGGVVHITYTW
                     NRKNIVYCRLQTV"
     gene            complement(14705..15235)
                     /locus_tag="MOX77_001454"
     CDS             complement(14705..15235)
                     /locus_tag="MOX77_001454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b"
                     /protein_id="HCA3357028.1"
                     /translation="MAHFSRLQITLHWLTLLLTGIAYAAIELRGWAPKGSSVYLFMKD
                     MHYDMGVLVWALMFLRLYLKHKYPDPVITPPPPHWQHVAAKLMHIALYLTFLALPLLG
                     VAMMASGGKSWSFFGFTVPVFLTPDSTLKSDIKRIHEMLANIGYFLIAMHAAAALFHH
                     YIQKDDTFSRMLPGKS"
     gene            complement(15384..15698)
                     /locus_tag="MOX77_001455"
     CDS             complement(15384..15698)
                     /locus_tag="MOX77_001455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRL-like family protein"
                     /protein_id="HCA3357029.1"
                     /translation="MTNKKHIFSIIFIGSLLTGCATGPSPTGIGLYTDVKGPITATSL
                     PATKTGKACAQTVLGIVNTGDASIDSAKKAGDISLVSSVDYETTGSYPFYGKTCVVVR
                     GQ"
     gene            16402..18036
                     /locus_tag="MOX77_001456"
     CDS             16402..18036
                     /locus_tag="MOX77_001456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HCA3357030.1"
                     /translation="MLRREKQKQRIIWDKLMIKGKLALVTCALTLVFTSSLFAASDTA
                     DGRTLKLAIGPEPTEGFDPMLGWSHGSYLLLHAPLLKQNADMSWGDLLTEKVDTSPDG
                     KIWTLTLKPGLKFSDGSPLTAEDVVFTYNKAAKSGGKIDMGNFSHARALDARRIEMTL
                     SHPQSTFVNVLGSLGIVPASRYDEKTFAREPIGAGPYRLVSFQPGQQLIVEANPWYAG
                     KKNDFNRLVFVFLDEDNAYAAARSGQLGLVRIAPSMAVTPQQDNLKLWVRDSVENRGI
                     VFPMVPAGKKDANGYPVGNDVTADVAIRRAINYAINRKQLAEQVMEGHAIPAYSAVQG
                     LPWQNPSVVFSDGDIAKARAILEEAGWKINSAGVREKAGKEARLTLWYASGDSTRRDL
                     AEAVRAMLQRLGIVVSLQSGSWETVERHMHANPTLFGWGSLDPMELFHHYSGKAAGVE
                     YYNPGYYSNPAVEAHLKQAIDAPDWQKAIPFWQQVEWDGKQGAGVQGDAAWAWLLNIQ
                     HTYLANPCIDLGKGSPEIHGSWSVLNNLDDWTWTCR"
     gene            18036..19010
                     /locus_tag="MOX77_001457"
     CDS             18036..19010
                     /locus_tag="MOX77_001457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCA3357031.1"
                     /translation="MKLFFSHFLRLIILLVLVAAGTFILLSFSPVDPIRAYIGNDLLH
                     VPPEQYARIAARWGLDQPLWERFGHWFWRLLQGDMGYSMLFNMPVASVIRERFATSFA
                     LLAGAWLLSGVLGVTLGFLAGRFLHRWPDKMICRISYLLSSLPTFWIAMLLLALFAVR
                     WPVLPVCCAWDPGNNAGTALLSERLRHLVLPVCALSLLGMGQIALHTREKIASVMKSE
                     FIRFARAQGDKGWSLLRHQVLRHAITPALCLQFASLGELMGGALLAEKVFAYPGLGQA
                     TIDAGLRGDVPLLMGIVLFCTLLVFAGNTISAWLVVVLNRSLERPDAL"
     gene            19000..19812
                     /locus_tag="MOX77_001458"
     CDS             19000..19812
                     /locus_tag="MOX77_001458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCA3357032.1"
                     /translation="MLYNPAPTLFRLLLSVTCLLFIAGYGYATLSQPPEVNLLARHLS
                     PDIQHWFGTDNLGRDVWLRCFQGAFTSLQIGVGAALCSGVIALVMAAVARIHPRLDLL
                     VRLITDAMLAMPHLLLLILICFTLGGGKSGVIAAVALTHWPRLALILRADAERVAQSD
                     YLTLTYRLGHGHLYCWRYHYFPALLPQWLTGTLLMFPHAVLHSAALSFLGFGLAPHEP
                     SLGLLLADALRFISHGNWWLVLFPGLMLFTLVMLFDQFARAIQRLWLRSDVC"
     gene            19806..20603
                     /locus_tag="MOX77_001459"
     CDS             19806..20603
                     /locus_tag="MOX77_001459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HCA3357033.1"
                     /translation="MLSLQRVTLESARYRWYGARRWSPLLQNVSFDIAPGEMVALVGG
                     SGEGKSLLLQCLLDLLPENLRFRGEITLDGNRLDRHTIRQLRGNTFSYVPQGVQALNP
                     MLNIRKHLNRACHLTGRAWDETQMVQLLQQSDLAPTVLERFPRQLSGGMAKRILACHA
                     SLSQARYILADEITAWLDTALANQLLEHLRGLCERGCGVLWVTHDLLLAARYADRIVA
                     LHQGYITDNIRCERLQPEEMSEPLKRQWQALPELNPLFMPTGEGIEC"
     gene            20597..21187
                     /locus_tag="MOX77_001460"
     CDS             20597..21187
                     /locus_tag="MOX77_001460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HCA3357034.1"
                     /translation="MLSCRDLVIRQGGKVLWQNLTFTISAGERVGIHAPSGTGKTTLG
                     RVLAGWQKPTTGDVLLDGSPLPLHQYCPVQLVPQHPELTFNPWRSAGDAVRDAWQPDP
                     ETLRRLYVQPEWLTRRPMQLSGGELARIAILRALDPRARFLIADEMTAQLDPSIQKAI
                     WVYVLEVCRSRSLGMLVINHQSALLDQVCTRHLQVE"
     gene            complement(21269..22402)
                     /locus_tag="MOX77_001461"
     CDS             complement(21269..22402)
                     /locus_tag="MOX77_001461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HCA3357035.1"
                     /translation="MEYLARLNIVAMLMSTTFWINLAVVFFVTLITYWLINWLLNVVY
                     KALQRPDKKDDAHGRLRPIVFEMLKKTSKMLIFFAAFLFSLRFVALPDRLFSTLSHAW
                     FLVVAIQMAIWLDQGVQSWMRHLLYAPGSNKNPVTLVILGMILRVLVWSMMLLSILAN
                     VGVDITALVASLGVGGIAIALAVQTVLSDVFASLSIGFDKPFEIGDFVVFNDVAGTIE
                     HIGLKTTRIRSLSGEQIVCANAQLLQQTIHNYKRMQTRRIVFTFGVATATPPEKLRLI
                     GDMVKKIITDVGETQFDRAHLLAFGQDRLTYEVVHIVNTADYNKYMDIQQEINIRIIE
                     KLIENDIELALPSLVVRAPVQVEETRDYSNTADAKNADKRVMQ"
     gene            22596..22922
                     /locus_tag="MOX77_001462"
     CDS             22596..22922
                     /locus_tag="MOX77_001462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four-helix bundle copper-binding protein"
                     /protein_id="HCA3357036.1"
                     /translation="MQQEHRECIEQCYECAAACDICASSCLREDNVEMMKHCIELDMQ
                     CAAICRLAAQFMALESEYSQKLCRLCADICKACAEECARHDHDHCQNCARACSQCADA
                     CLKMAA"
     gene            22931..23007
                     /locus_tag="MOX77_001463"
     tRNA            22931..23007
                     /locus_tag="MOX77_001463"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:22965..22967,aa:Arg,seq:tct)
     gene            23119..23766
                     /gene="zinT"
                     /locus_tag="MOX77_001464"
     CDS             23119..23766
                     /gene="zinT"
                     /locus_tag="MOX77_001464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460229.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-binding protein ZinT"
                     /protein_id="HCA3357037.1"
                     /translation="MIHLKKLTMLLGMLLVNSPAFAHGHHAHGAPMTEVEQKAAAGVF
                     DDANVRDRALTDWDGMWQSVYPYLVSGELDPVFRQKAKKDPEKTFEDIKAYYRKGYAT
                     NVETIGIENGVIEFHRDNNVASCKYNYAGYKILTYASGKKGVRYLFECKDANSKAPKY
                     VQFSDHIIAPRKSAHFHIFMGNTSQQALLQEMENWPTYYPYQLKANEVVDEMLHH"
     gene            23875..24663
                     /gene="aadA"
                     /locus_tag="MOX77_001465"
     CDS             23875..24663
                     /gene="aadA"
                     /locus_tag="MOX77_001465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cryptic aminoglycoside nucleotidyltransferase
                     ANT(3'')/ANT(9)"
                     /protein_id="HCA3357038.1"
                     /translation="MTLSIPPSIQCQTEAACRLITRVTGDTLRAIHLYGSAVAGDLKP
                     NSDIDLLVTICQPLTETQRATLMQELLALSSPPGASAEKRALEVTVVLYSQLVPWCFP
                     PSREMQFGEWLREDIYQGIYEPAQQDWDMVLLITQILETSIPLKGERAERLFTPAPAA
                     QLLKALRYPLDLWQSTADVQGDEYHIVLTLARIWYTLSTGRFTSKDAAADWLLPQLPE
                     EYAATLRAAQREYLGLEQQDWHILLPAVVRFVDFAKAYIPTQFT"
     gene            24808..25401
                     /locus_tag="MOX77_001466"
     CDS             24808..25401
                     /locus_tag="MOX77_001466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HCA3357039.1"
                     /translation="MTGSASSVLKTDTRLLSENLFLNYGLESLFKDVAIIAGNVNYIV
                     FDIDDYYTVQQYITSTFKTVLIGIVTHNEYNFIDEHHAIYRIKVDASIAEWRELLILA
                     AAGQFFPRSEKVRLTANERNVLAMLVKGMDIRQISCELNVHLKTIYSVRYHVLTKLGC
                     RTVLDYQILSVSKAFTHWLTINNVDNVIFRVNSKVIA"
     gene            25470..26318
                     /locus_tag="MOX77_001467"
     CDS             25470..26318
                     /locus_tag="MOX77_001467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HCA3357040.1"
                     /translation="MATFSISAMAAQCGVTTANIRSWERYGLLQPTKDEAGNRFYCIE
                     DAIRIQHIIDALSKGFSLKEIKPALYGEETHCRSGWLFYQEEILAQCRKFEPAKLRKL
                     LWRYGREIPPCIVIESILRPLWLWLSAGDDDARRFEKALLDTAIIEYATFQLSSVRKA
                     PAGTMLIAAFSLNDPIELWLETIKYCSEGMRVEVIPWQAPMPDLLSTSFEHIVLWHDE
                     TLTPAQENLIQALKESGKFSLHVKNGSGLTLLPAVYRQHEMPESMQHVAPQIHANGYE
                     KSGTAR"
     gene            complement(26573..26821)
                     /locus_tag="MOX77_001468"
     CDS             complement(26573..26821)
                     /locus_tag="MOX77_001468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HCA3357041.1"
                     /translation="MTTITLVNEQNSTGNPFSAHMLCEQRAIQEITYELLQSQQHVSN
                     KDIIAKLIEKLETEKDVVQLDIYRNALEAVFFQTPDDI"
     gene            complement(26900..27055)
                     /locus_tag="MOX77_001469"
     CDS             complement(26900..27055)
                     /locus_tag="MOX77_001469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357042.1"
                     /translation="MLIRLNWSEKKEQAVDSAESSPSFKVYKIYNKSHKCDAHHVFMI
                     FYYSFMI"
     gene            27138..27683
                     /locus_tag="MOX77_001470"
     CDS             27138..27683
                     /locus_tag="MOX77_001470"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HCA3357043.1"
                     /translation="MIRHIAIFLCSLLMCSTTFADSVTSVSLGALLTALNERMLLMKD
                     VAAYKMKHHLPIEDFTREQNVFAEAEEEAKNNGLDPHSITPFIRSLMDASKAIQYRYL
                     AQWRTGSEPSFPIQTLSVTRQRIRQLDNQMLIIISQRLMVGAFSHEDMVWLRTHFNAP
                     NLNESDISDVLAALSLVRHAR"
     gene            27879..28517
                     /gene="leuE"
                     /locus_tag="MOX77_001471"
     CDS             27879..28517
                     /gene="leuE"
                     /locus_tag="MOX77_001471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine efflux protein LeuE"
                     /protein_id="HCA3357044.1"
                     /translation="MFAEYGVLNYWTYLVGAIFIVLVPGPNTLFVLKNSVGRGVKGGY
                     LAACGVFIGDAILMFLAYAGVATLIKTTPVLFNIVRYLGAFYLLYLGAKILYATLTSK
                     GRAATETVVPFGAIFKRALILSLTNPKAILFYVSFFVQFIDVTAPHTGVSFFILATTL
                     EIVSFCYLSFLILSGAFVTHYIGTKKKLAKVGNSLIGLLFVGFAARLATLQS"
     gene            28690..29052
                     /locus_tag="MOX77_001472"
     CDS             28690..29052
                     /locus_tag="MOX77_001472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1971 domain-containing protein"
                     /protein_id="HCA3357045.1"
                     /translation="MRQIPQNHIHTRSTPFWNKETAPAGIFERHLDKGTRPGVYPRLS
                     VMQGAVKYLGYADEHCSEPEEIMVINAGEFGVFPPEKWHNIEVMTDDTYFNIDFFVAP
                     EVLMEGATSRKVIHAGRE"
     gene            29055..29237
                     /locus_tag="MOX77_001473"
     CDS             29055..29237
                     /locus_tag="MOX77_001473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1869 domain-containing protein"
                     /protein_id="HCA3357046.1"
                     /translation="MGKATYTVTVTNNSNGVSVDYETEAPMTLLVPEVTAEVVKDLVN
                     TVRSYDTENEHDVCGW"
     gene            29467..30108
                     /locus_tag="MOX77_001474"
     CDS             29467..30108
                     /locus_tag="MOX77_001474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357047.1"
                     /translation="MKLDTRLTSSALTLALAAVVIPFTADWQLPLLNGVVVRWIENGQ
                     ALWLLFGALFTAWYIRPLSRPEGAKQFWLWAVVWWVVLLGRSTSWGRDYFPDEPRMLF
                     RTISVLLIAALVLPVLFFAGLRKEIVRRLRDVPLPLWLFTVTACSYLISDTVEHHRWL
                     SPIFLHNARYTDLIEELYEVPFMIGLFMVTVGFMQQDKQDECTALELTPYHAK"
     gene            30422..30670
                     /locus_tag="MOX77_001475"
     CDS             30422..30670
                     /locus_tag="MOX77_001475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HCA3357048.1"
                     /translation="MGILSWIIFGLIAGILAKWIMPGKDGGGFFMTIILGIVGAVVGG
                     WISTFFGFGKVDGFNFGSFAVAVIGAIVVLLIYRKIKS"
BASE COUNT         8172 a         6477 c         7411 g         8654 t
ORIGIN      
        1 gtattcgaac ggttatcaaa ataatttatc aaaacgtcct caattcagac cgcaatagta
       61 gtccatcctt taccccgatc gtcatgataa cctgagaccc cctgaaagct gatagttacc
      121 gattttgatt gtggtggttt tctttatgat gtgtggtttg gctatttttt gaaagtgcct
      181 taccagattt attgttatta tcaggggatt atttcaataa aaggtgatga tttattgcct
      241 gcaatagtgg gtagattaag cattttatga aattattagt gtctttattt gcacttctac
      301 aagactgtta agaggtgttg aaatatcagc ctggtaaaga atacgtcagc gaaagtgaat
      361 gctatattag tcataaaaat tcaggagaca tatgctcaaa cctatcttct acagtggaag
      421 tgtgaaggtt ccggaatgtc tggaaacaga taaggaaaaa aatgtcggac gtactcctct
      481 gtcttcagac attcagcaaa ttaaaaatgt tgttgaagat attccgccat ttccagaaag
      541 cagagcggtg ggaggttctg taagcgcagc gtacaggctt tcttttgacg aagtgttttg
      601 cggtctcagc aatgaagagc gtaaaaaggt gtatggtcgc ctttttggaa aacaagtact
      661 tgcgcatatt cattccaggt gtcagcgcga cgctgacata ataagagaaa aagcgctcag
      721 gcggataagc cgtgagtgtg gtaccgaaat agattgcgct ctcttactaa ataagatggt
      781 ggatatttta caaaatgccc ggctgacaat aaattttaat gcagcaaaaa ttgactttgt
      841 ctctctctta aaaaataaag aatatctgaa ctcttatgca ttaggttgca gaccaggaga
      901 tttacctgct tataatgtcg ggcgtgattc agttgaaact aaagcatttg aactggagaa
      961 gcttgcagat tcaccttatg ccccatatgg tcagacaggc ggtttttccg tagcatatac
     1021 tcccaacagt aaaactttta gccctacaag cagaccaatt tatgctgcac tggactttct
     1081 gaacggtgaa aatggaggtg ccagcgccta tgggaaatca ttttttgaat taaatgataa
     1141 tgtaaaaaca aattgtacat tctcaccttt tgatatctac ggccacagat ttggcctgga
     1201 tactagtaaa ttatctacat tttgccatat ggagaacctg attgcatcct gtcaaaatga
     1261 tttttttggt tataattgct ttaagagttt ggttaaaatg gctaagggcg aaaaattttt
     1321 agctcattct aattatggta caggctatga agggaattat atagaggctc atattcatgg
     1381 tgatgtatgt ttattcagag atataaagca cgtttatttg tctttgcaag aaaactctta
     1441 ctcggaaagt caactatatg attatgcaaa acaaataaac caggcgctta atagagactg
     1501 cataatatta tattgacaag cttattatca ggctctttaa aagagcttta aatgatcatg
     1561 agcacatact tcttaaggta ggcagtaact gcttttatat ttattatagc aggaccgctc
     1621 tggcagatac ctgtgtggca cctcagtatg gcctgaaaaa tagaggaata tggaccagca
     1681 gaagcgcctg ctggctactt ttcacttaaa tcgctggaat tcaccggcgc tacagatgaa
     1741 gcgaccttaa cagtcatcag gtgtcctgca ttaccacagg agtgatttac tggctatcga
     1801 tattcctgct catcaggttt ttacgccatc tacgcacatt tattctgcta taagttgaaa
     1861 tactgcaaaa aatattaagg cttattattt tttctttaag caaattttcg ttcaacaaac
     1921 ttggatgcgg gaatgtgtga aatatcattt ctttatacta gaactcagcg acctacagct
     1981 cacaacttta ttagatcctc ttcctgaata tattactttt ctggcagtta tcaacaatag
     2041 gctgactaaa ttgccggaca ctttgcctgg agggtacaga cagattacgc gggtaggatc
     2101 actacaccgg gaaaagattg ccagttaatg ggatgtcgtc catgtttcag ttggaggata
     2161 atgatttatt tccccctctt tgaccctaca atagtgatct gatagttatc ctgaacgttc
     2221 ttacagaggg cgggcttgtt aaataatcat caagttatta atgagttatg tcctgctttg
     2281 ctgaaaataa aaatcagtag acagacgacg gcgaacaata tgagccggaa gtgcctgtgt
     2341 tattactgtg gcgtgaattc tgtaactgat aaagtaggtg tgcttattat cagtaatgaa
     2401 attttttata tatgtattat tactattcac aggtaatttg attgtttgtt gtgagtaaca
     2461 ttgtgttgaa gtaaaccatg atagactgga ctgtgatgtg gtgagatata atgaatttgt
     2521 gttttattaa ttattttaaa cgtacaggag agtagtatgt atatgagtaa gtatgtacct
     2581 gtttatacat tattaattct catttattct tttaatgcca gcgctgagtg gacaggagat
     2641 aatacgaacg cctactactc agacgaagtt atcagtgaat tacatgttgg tcagatagat
     2701 actagtcctt atttttgcat aaaaacggtt aaagctaacg gtagcggtac accagttgtt
     2761 gcatgtgcgg tatcaaagca gagcatatgg gcgccctcct ttaaagaact tcttgatcag
     2821 gcaagatatt tttacagtac agggcaatcc gtaaggattc atgttcaaaa aaatatctgg
     2881 acctatccgc tttttgttaa taccttttca gcaaatgctc ttgtgggact atcatcgtgc
     2941 agtgcgacac aatgctttgg acccaagtaa gaggggagaa gaaataatga aaaagttaat
     3001 attcttaacc ttatctatag ttagctttaa taactatgct gtagattttg tgtatcgtgt
     3061 ggactcaacc ccgccggacg ttatttttcg cgatgggttt tcactacttg ggtataaccg
     3121 taactttcag caatttatta gtggaaggtc atgtagtggt ggaagtagtg acagtcgcta
     3181 tattgcaaca acctcaagtg ttaatcaaac atatgctata gccagagcgt actattctcg
     3241 ctcaacattc aaaggtaatt tatacagata tcagattcgt gcagataata atttctacag
     3301 cttgctccca tccatcacct atctggaaac gcaaggtggt cactttaatg cttatgaaaa
     3361 aacgatgatg cgattgcaaa gagagtatgt ttccacatta tctattttac ccgagaatat
     3421 tcaaaaggcc gtggcgctag tttatgatag cgcaaccggt ctagtaaagg atggtgtaag
     3481 cacaatgaat gccagttatt taggtttaag cactacgtct aatcctggtg tgataccttt
     3541 tcttccggaa ccgcagacgt atacccaaca acgaattgat gcattcggcc cattaataag
     3601 ttcatgcttt tcaataggta gcgtatgtca ttcacatcga gggcaaagag ctgacgtata
     3661 caacatgtct ttttatgatg caagacctgt aatagaactt atactttcta aataaatgaa
     3721 acttacctat gttgcctatt aaattaaaca gcccgtttat tagttgcctg gttaatattg
     3781 tttattaagt tggctatcca cttaaatata aatgtttata tacttcgata agttttttat
     3841 cagattcatt gcattaccaa tcatagcatt caggtacgta ttttattaat attagaagga
     3901 gtcattatga ctaaagatga aatctttgca gctatcctta gtagagaagg cggttacgtt
     3961 gatcaccctg acgacagggg ggggccaacg cattggggta taaccctgac gacggcccgg
     4021 gctaatggct atatggggga tatgcggaat cttacccgta atcaagcatt aaaaatcctt
     4081 gaggcagatt attggtatgg tccacgactt gatcaggttg ccattatctc tcactctatt
     4141 gcagctgagc tttgtgatac tggtgtgaac atgggaccct caatcccgat taagtacttc
     4201 cagcgttggc ttaatgtttt taatgatcag caaaaaattt atccggattt gatagcagat
     4261 ggtcagattg ggccacggac gctttcggca ctaacatttt ttctctctca ccggagagat
     4321 gagggcgaaa tgatacttat ccgggcattg aattgtagtc agggacaacg ctatctggag
     4381 ttagctgaaa agcgccaggc gaatgaatca tttgtttatg gatggataaa ggaacgggta
     4441 agattgtaat tcccttactt accactatag cggtttgtga tgatagcata taatgatata
     4501 ttcacacaga gaactggtga aagccactaa gtctcattat tactatatta aggcgtcagg
     4561 tttttctata gttctttgtg tgttaaaaac gagaaattaa ttatgttgta tggtatgaga
     4621 atgatagtat ttccagccaa atattcttac ggctaaatac attattatcc ttttccattt
     4681 tggcacgccc agaactttca tcccatccag gaatatgaga tcggactctt ttctgttacg
     4741 taatggataa tgatacaggt agtcatgaat gattgccgct ttggcatatt caccatccgg
     4801 tggcaataat gaccagaaaa tacgcggaac agtggcaagg tcggtaacga atcctaccgg
     4861 tacttcaatg acatcatttt tatcttcact gagataaaac ctgaatggct cataaacacg
     4921 ccatttataa tgacctaaca tttccataat tgctggactg gtaaaacaac tcataatttt
     4981 accttataat aaatatatat tctgcacctt acgctcaaag tacatgtcgt aaactctatt
     5041 tactcattaa cagcttcgtg ccaaaaaggc tacgggataa tgatcagaag cgagttgtgg
     5101 attacgtaat gcttcaaccc tttgtgaata aggtgctcga tcgacaatga ccccataatc
     5161 taaaatacca ccgccaattt gcgtgggttc tgtaggtgcg agtacggcta caactcgttc
     5221 cagatgctca gtcatcaggt cattttcaag tctgtctggg ctgcgattaa aatccccggc
     5281 aagaaaccag gataaatgcc gcatctgagg ttgtctaaaa aaattaatgg taaccctgac
     5341 aatagctgca gcatccggac ctccactagc cagtgcgtgc gctgtcagaa aaacatcatt
     5401 acccagtccg atgccaatga cggggcgaga tgcgacagtt gtcggacgca agacataaac
     5461 attatccgct ctttgtctgg aaactattgc cagattaaca cggcgtgctc caacatcaat
     5521 agccgagtgg tagatatatc ttatatcctg acggctggtg gttccgagat tccaggtgta
     5581 ttcatcaatg ggaataccca ctccaaaagg ctgaatatgt cgtccggtag gaaccgctga
     5641 ggtgggaaca gcaccggcct cctgtaccat aagaatatcc acaccggcag taccacttaa
     5701 aagctgtctg acattgacat tccatttact ttctgtagat gctgaagagc cctgaagatt
     5761 ccaggtcata actttgtagt cactgatatt agcgcaggca aaagaaatat agctgcagat
     5821 gatcatggtc agaaggaaaa aaacaggttt tttcataata tctactctcc cgagcattac
     5881 ttctttatct gaatgatata tgtgttaata acccattgtt tcatgacgtt gattttattc
     5941 tggcaatgcc tgacttgttt ctggttctat gtcttgtgta ggtagtaaga tacatagtct
     6001 aacgtcaata aaactaaaat ggatgtctat tacagaggta aaatgaagtt tattcagtac
     6061 aatcaattaa ttattgttaa taccaaagag acaactatga ataaacaact aactgaattt
     6121 aaaactccat tcgcttaact cattgtaact gtattgggtt gatttatttg cggaaagaga
     6181 gattcgatat cattggtact ttataagtaa acataaattt ttcattacca ggattattat
     6241 atccctgtga gggaggtgac atttcatcta ttctcactct tgtagtgaca tagtaaattt
     6301 ggccacctga ttaaaggcga tgttctcacc tcaacacaaa acaggtaact tagtgaacaa
     6361 gaaaaccaaa caaatcaatg gttacatctt gaacggctac aatagcgtca gacctcatca
     6421 ttataacggt gcactgacgc cggaagagtc tgagaacagg taccgttttt actgtaaaac
     6481 cgtgaccaat agcgtcgatg cgcaacaaaa cgtataatcc gttgataggg cgtacaggtg
     6541 tggcactggg caaaacgttc agtgacaatg actggagctg gcggcatttg gcaaatagca
     6601 tgttgaccac gctataaacg ccaacttccg ctacatgttc tgagtggtgg cgtttgcgtt
     6661 atatcgtcac agacagcgcc tcagggcgct gttttcgatc ggacatgtcg ctttcgcagg
     6721 aggggacgtt attcggcgac cagccacata tcagcctctt caaacatctc ttccagcata
     6781 cggtgcagcc gttctttctc ggtttttgta cagtcactgt ttaatgcgtt cgcctgcatt
     6841 ggcttaactt tcacttgcgc atcgggaaaa agttgatgta cgcgttttgt gagttcattg
     6901 aggatgattt cgcgtgcgct tggcaaacct tcaacatttc gcttgtcata aacgagttcg
     6961 acgaacatcg ctatttcctt tttactggtt ggatgaccag tatttaagct gggtatataa
     7021 ccggtgtcaa ggtttagccg ccgttttgtc atcctaacgt tgcggatgta aagtaaattg
     7081 atcgcacatg gaagtaaagg tcgctaacct gttgtcatgt caagaggtta gcggctctct
     7141 cttcacagcg gtgtcctgct acctgatggt aaattccagg gcgcgactaa aatcgcaatc
     7201 ggctaacaca acagggtcgc cttttctgac aataatgcta tttgtgccca ggcattttcg
     7261 gctctgtttc cccttaattt tgttatcatc agtgagccag cgctggttat cattacccgt
     7321 gcatgaataa agaatgattg gcgtgccttc tttcgtaccc tgtcctgcag catccagaca
     7381 tttctcaccc tgcgtgattc tgtctcggtg aaatgagaaa agctgagatt gcacatgttt
     7441 acactcccgc agcgtcaaac gattctgttg atctgggcct gtatcaaggc acagaccatc
     7501 agttgtccga atttgttccg cgtcatttat gtaataacca ccggaattaa tttggttttg
     7561 tgtaatgacc gggaacgaca aattaatact ataaggtgcg ggtaagccgt tcgtcgtaca
     7621 tccacataaa atagaggaga ggcagagaac cagtgtgttt tttcctgaaa gcaaagtcat
     7681 tcaattatta ccctaaaaat aaatagcatt acaactatat tggcaattta tacccactga
     7741 atatgacgta gcattgagcg gcaataaaga taattccgat agaatcacat aaatacttcg
     7801 gttaaatgcg cgcagccagc cactcctgcg acgatgggta tatagcgtta aatacttttg
     7861 caatattaca tgctatcaca gtgaaaaacg gctgtacatt tcttcacgtt aaacaaagtg
     7921 agaagggggg ttgacacccg atatatgata aaagaggtca caggagtcat tagcaaaata
     7981 aatcttttag attttcgcca ctgaaaacat tctgcagcct ttcaggcaaa gcctcatagc
     8041 agactgcgga ggtatacgta ctcgctaaat ttttctgaaa aaatgccggg tgacgaatta
     8101 tgaaagataa acgttggcgg cggtaggtcc gcggagtcca ttaatacgac aaaactcaac
     8161 gcgtataccg gggataagag cttctgtttc gtgttggcga catgctgaaa tgtggacctg
     8221 aacatctttg cgtccatcgg agggggtgat gagaccttta ccgctcttac aatcaaaggt
     8281 tttgacaatt cctgtcattt tacgagacaa acaaattcct taatggggat aacgaggcgc
     8341 actatacacg tcaggaaaaa taatgccagc tatatttgat ggcaatcaag atttccggat
     8401 ggctaaaagt agtcgttcgg caccattgta gataaataac attatgttct ggagaaagta
     8461 ttccctttcc tggcgtcgtt ggttggtgcg gacatcatgg gttttgccgt cgggcaggat
     8521 ggtgaactaa tctgcctggc ttgcttttta tcggtatttg taggtggttg cggggtttta
     8581 ctaccaaaat cgtagataaa aatttcccat gatgcctgtt gtaaaccaga acaatggtct
     8641 gaactggcca aaacatggaa tgaaaaaata agtaatgacc aaagcataaa agcatgatgt
     8701 ttcatagcac ctcctgttat atgtaatgac ttgcgaagtt catctaatta attatgggac
     8761 gtcattggca ttttttattc aacgaagagt taaccactct taataataat gggttttata
     8821 gcaaaataga cttttttatc gagtgttcaa tatttgcgtc cgttattatt tttctggaat
     8881 gtaaattctc tctcaacaca ggtgaaattt atgtttgaat tgtggtgttg attctattct
     8941 tataacaaga aatgttgtaa ctgatagaca tattaaaaga ttgaatcgga gcgggaataa
     9001 agcatgctga acatcatggt gaataggatt acggtgccag cgatggcatg taacggcatt
     9061 tcgtctggag cgtcacgtga ggactgtgaa gcacaatgcg atatgttctg gttatatggc
     9121 gagtttgctt aatgacattt ttttagccga tcagcgtcag gcttcttaat gtggttgtga
     9181 tatttttctt taaatatcaa aagtttgtat gacgtgtttg ttgttttata gtggctaaac
     9241 actttatggt ttctgttaaa tatatatgcg tgagaaaaat tagcattcaa atctataaaa
     9301 gtgagatgac attgtagaac cggttacctt aatgagcgat agagcgcttc ggtagtaaaa
     9361 atatctttca ggaagtaaac gcatcaggag cgatagcggt gaattattcg tggtttgtcg
     9421 attcggcata gtggcgataa ctgaatgccg gatcggtact gcaggtgttt aaacacaccg
     9481 taaataataa gtagtattaa ggagttgtta tgaaaaatat tattttatcc actttagtta
     9541 ttactacaag cgttttggtt gtaaatgttg cacaggccga tactaacgcc ttttccgtgg
     9601 ggtatgcaca aagtaaagtt caggatttca aaaatatccg aggggtaaat gtgaaatacc
     9661 gttatgagga tgactctccg gtaagtttta tttcctcgct aagttactta tatggagaca
     9721 gccaggattc cgggtctatt gagtctgaag gtatccatta ccatgacaag tttgaggtga
     9781 aatatggttc tttaatggtt gggccagcct atcgattgtc tgacaatttt tcgttatacg
     9841 cgctggcagg tgtcggcacg gtaaaggcga catttaaaga acatgccact caggatggcg
     9901 attctttttc taacaaaatt tcctcaagga aaacgggatt tgcctggggc gcgggtgtac
     9961 agatgaatcc gctggagaat atcgtcgtcg atgttgggta tgaaggaagc aacatctcct
    10021 ctacaaaaat aaacggcttc aacgtcggaa ttggataccg tttctgaaaa gcataagcta
    10081 tgcggaaggt tcgccttccg caccgccagt tacaaaacag ggcttcttta ccagtaacac
    10141 gtacctgcct gtcttttctc tcttcgtcat actctcttcg tcatagtgac gctgtacata
    10201 atatctcacc agcataagca cagataaagg attgtggtaa gcaatcaagg ttgctcaggt
    10261 aggtgataag caggaaggaa aatctggtgt aaataacgct agatctcaca ggattcactc
    10321 tgaaaaattt tcctggaatt aatcacaatg tcatcaagat tttgtgatcg ccttcgcata
    10381 ttgtacctgc cgttgaacga ctactaaaaa gtagcaaggt atgtatttta tctaggagag
    10441 cacctttttt gcgcctggca gaagtcccca gccgccacta gctcagctgg atagagcatc
    10501 aacctcctaa gttgatggtg cgaggttcga ggcctcggtg gcggtccaat gtggttatcg
    10561 tataatgtta ttacctcagt gtcaggctga tgatgtgggt tcgactccca ctgaccactt
    10621 cagttttgaa taagtattgt cttgcaatcc tgttacagaa taatttcatt tattacgtga
    10681 caagatagtc atttataaaa aatgcacaaa aatgttattg tcttttatta cttgtgagtt
    10741 gtagattttt cttatgcggt gaatccccct ttgcggcggg gcgtccagtc aaatagttaa
    10801 tgttcctcgc gaaccatatt gactgtggta tggtccaccg ggaggcaccc ggcaccgcaa
    10861 ttttttataa aatgaaattc acaccctatg gttcagagct gtgtttttac atcaggtggg
    10921 caagcataat gcaggttaac ttgaaagata cgagcaataa cagaaaccag tgatttcgtt
    10981 tatggcctgg ggatttaacc gcgccagagc gtatgcaaga ccctggcgcg gttggccggt
    11041 gatcgttcaa taatgcgaat atgaatggtt accagccgct gcgaattcta cctgggtcac
    11101 ttaataaagc aaaacattta aacactcaac aacgacaatt cagacagttc gaacttttct
    11161 ttaaaaatag gattaaccat gtttaaaagt ggttactaat tagccattat cctacggtag
    11221 tgattcacat attctttaac gttacgttac aggaaggttg aagtggaaat gcctgatgag
    11281 ccttcaggca tttctgaagg ttagttagct aaggaacagt tactgagaac aggtttatca
    11341 tcaccttcca ccagtttagc cgttttgcct ttggtataaa gtttgtaagt ataatttttg
    11401 tctatggctt cgtaatttgc tccggaggcc attttcatta accgcatcgg gatcatctcg
    11461 tttacctgac tgataatcgc ataggcgttt ccagcctcgg tgttgacgta aatcacctcc
    11521 ataacctggt tatcattaca ggtgtatata gatttagaaa tctcctgcga agctgctata
    11581 gaggtggtac tggcgctaag cgcagcgaga aagagggtaa atgggatcaa tttacgtttc
    11641 atcattagta tcctttgtgt ataaaattgt cgttaattcc ctgaagagcg ggagataaag
    11701 cggcatcaat acgatgaatg ctgtagtatt cctgtttact gacgaaaagt gcgccagaaa
    11761 agcgtattat aatttatcca tcactgacat atgtgatgag tagacaaatc ttaaaatcat
    11821 aaactataga ctgcaaatca ttatggcgcg atggaaaatg attgtcacca ctgctcaata
    11881 ctatggcata aaaaccgaag aaaacggtac tgttcactgt ctcgtttcat acggtatctg
    11941 tcagtgaaac tatttcttca aatgatggtc tttttattat cgatcagata atggcatcaa
    12001 caggggttat ttaggagtat atgtgaaaaa gtggcttata ggagggatat tgatcgcaag
    12061 ttttctgacc ggttgtctga tgtggcacaa cattgataaa tggtttaata aagatatcga
    12121 agttttctac gccggagacg ataactaaaa ctcctgtcag ttggcaacgg gtgtcatatc
    12181 ttcaggtatg gcgcccggag cagccgggcg caaattgtag gtgtataaaa gtcatttcat
    12241 taaaatttta gcgacaacat ggacagtcac taccgcgtgc taacggccct ctgaagtcac
    12301 aagatgaata agccagtttt ttgtttcagc ggtgactgaa acatattttg ctcctggtgg
    12361 gcttaccgcc agttgctgaa aaagacaacg atgatgtaac tgttgcagag actgacgaat
    12421 acgacgaccg tgagttttat ttttggcgac catatttcct cccaaaaggc cgcccgaagg
    12481 cggcgctggg tttgataatg gagaagggcg ttggtcactg ccataaccaa cctgtataca
    12541 ctaatgtaat tgataatcat tatcaattgt ggtgatgaag aaaaattgta aagatgaagg
    12601 gacagcggaa atggcaatga acgggatgag atttttcgtt aaccacttaa attcgtgact
    12661 aaaaaaagtc ttttataggc ttgaaaatgt tttttccgtc cctatgtagt cagtggacaa
    12721 gcaatgcttg ccttgatgtt gaacttttga atagtgattc aggaggttaa tgatggcact
    12781 cagaaccttg tcagcacttc ccgtgtttgc tgattctctt ttctctgacc gtttcaaccg
    12841 tattgataga cttttcagtc aattaacagg agatacgcca gtcgctgcga cgccagctta
    12901 cgatctgcaa aagcgcgatg cgaataacta tctgcttacc gtgagcgttc ctggctggaa
    12961 agaggaagag cttgaaattg aaacggttgg cggcaacctg aatattacgg gtaaacacac
    13021 tgaagagacg gtagaggatc agacgcactg gatttatcgt ggtattcgta aggcagattt
    13081 ccagttgagt ttttctttgc ctgaacatgc taaggtgaat aatgcaaaac tggaacaggg
    13141 cctcttgttg gtagagattt accaggaaat ccctgaaagc gagaaaccga aaaaaattgc
    13201 catagaaagc aaaccaaagg cgattgaaca taaatcataa aagcattaat ggaggcccgt
    13261 ttagacgggc cttcattgtc tgtagcgaaa agtatcccgt catgcttgta ggcacagatc
    13321 gctaaatatt atagccctga cctctatatt atcccgtgcc actgacctcg tcgccattgg
    13381 acggcggtaa gttggaatta tccgcgaggt cagtccaatt tttgtccact ctcgacattc
    13441 tgcctgttat gggcgcgata cctgaacata aattcgtata gcggttgatc gttttcaccg
    13501 cgttgatgct atttctgcta acactacttt catacgtaaa aaagctgatg ctttttacct
    13561 tatttaatag aggcaggtat gaaattagcg ctcgtcaatc gacaggtcat tttaccggaa
    13621 agcggaaccg agtccttcca gtgccatgcc tctacgcttg ttcgcctacc gtgcggtacg
    13681 ctcgtggccg catggttcgc ggggttgtgc gaaggaagcg aagatacagc catctggcta
    13741 tctcgctatg aacataatat ctggacaaca ccgcagcgag tggcggcacg cgagggggaa
    13801 gcgcactgga atccggtgtt attttacccg tcggataaat tgtggttatt ttataaagta
    13861 ggcagcggcg tacacgtgtg gaaaacctgg tttatcacct ccagcgatcg aggatttacc
    13921 tggagtacgc cagctccgtt ggttaacgat gatattttgc cgcgcggtcc cgtaaaaaat
    13981 aaactcctgc tggcatcaaa tggcgcctgg attgcgccag ggtcgattga aagtcctgaa
    14041 cggtggaggg catttgtgga tcgatcctct gacgaaggaa aacactggaa tatctctttt
    14101 gttccgctgg agcctgataa cgctatttcc gggacaaacg tagcgttgtg ggatggtgta
    14161 aaaaagggga tgttgtggga atgttgtctg gaaaacctcc tgcgctggga tggcgttatt
    14221 cagcctacgc tgtgggagtc ttctccgggg catatccata tgttgttacg aagcacacgc
    14281 ggggcaattt ttcgcagtga ttcaatcgac tatggcgcta cctggtctgt tgcccgcgcg
    14341 acatttttac cgaataataa tagtggtatc gatctggtta gtatgcagga cggtacgctg
    14401 attcttgcgt taaatccggt caacggcaac tggggaaagc gctatccgct ttcactgatt
    14461 gcttcccagg ataatggcga atcatggcta ccgctactgg acctggaaag tgaccacggt
    14521 gagtattctt atcccgctat tattagcaag ggcggcgtcg tacatatcac ctacacgtgg
    14581 aaccggaaaa atatcgtata ttgtcgatta caaacggtat aaggcgctat cagtcgaaac
    14641 cgatagcgct ggaataataa tgccttgccc ggcgtgctct ctcacgtcgg gatggccgaa
    14701 atagtcatga tttaccgggt aacatccttg aaaatgtatc gtctttttgt atgtaatggt
    14761 gaaacaacgc cgctgctgca tgcatggcaa tcaggaaata gccgatattg gccagcattt
    14821 catgaatacg ctttatatcc gattttaggg tgctatctgg cgtcaaaaat accggtacag
    14881 taaaaccaaa aaagctccag cttttcccgc ctgatgccat catcgcgacg cccagcagcg
    14941 gtaaggcgag aaaagtgaga taaagcgcga tatgcattaa tttagcggct acgtgctgcc
    15001 agtgaggagg gggaggcgta atgaccggat ccgggtattt gtgtttaaga tataaccgta
    15061 aaaacatcag cgcccagacc agaacgccca tgtcatagtg catgtctttc ataaataggt
    15121 aaacgctgga gccttttggc gcccaccccc gtaactcaat agccgcatat gctatgcctg
    15181 tcaggagcag tgttaaccag tgaagcgtta tttgcagtct tgagaaatgt gccattatta
    15241 ttatccttta ttaacaactg cttgtagggt atgcgtaaaa tcttaacaga accttaaagc
    15301 gggggctgag tcgcaaggaa cagacagaga tagcggcacg taaaatggga taaaaagccg
    15361 gcggcatcgc cggcttactg ttgttattgt cctcttacga caacacaggt tttaccataa
    15421 aacggatatg agcctgtagt ttcataatca acactcgaca ctaaagaaat atcgcccgct
    15481 tttttcgctg aatcaataga tgcgtcgccg gtatttacaa tacccaatac cgtttgcgca
    15541 cacgctttac cggttttggt tgccgggaga ctcgtggcag taattggccc tttaacatcc
    15601 gtatataagc caatccctgt cggtgatggt cctgtagcac accccgttaa aagagaacca
    15661 ataaagataa ttgaaaaaat gtgtttttta tttgtcatgg gattagtcca ttataaatta
    15721 atagaaaact taccgtccga aaatgtccgg acagtcattt aaaaagtggt gtatattaaa
    15781 tatgcgatat tactctttgc accctcctgt tgatgtcgta cctgatggac aaatatccgt
    15841 tgaagccgga tatattcccc atgccgtgtt tttataactt gcgcatcctg tcagcaatga
    15901 gaacagtacg gctaaaaaaa tcatcacgag ccctggcggc gttaacattt ttcggttgga
    15961 ctccatagca tgtcatttca tcgggttgcc atatgactgg cgttctgctg gtaagtttca
    16021 ttaacgcctg gttcgtttaa tattggttta ggtttaaagc caggaagcgc taattacgat
    16081 accttcttac gtttcagtac tgactaataa cgttgagaaa atgaacagcg tcggatggga
    16141 agacgtaata cagaatagaa aggaaataag agaataagat ggcgttaatt aacccggtat
    16201 tcctggcgtc atttcccttg cgttttatcc ccgtcaaaag tggcctttag cccacgttgg
    16261 cgctcccgac gttgacaacc agtgagtgtc catagtgtgc gtatgatgtt tttaaaagat
    16321 cgtcatactt tctgttctgc atcaattttt tcattacaaa tgctcgccat aatgccgtcc
    16381 tcaggaggtc tcccgacgtt tatgctgcgc cgggagaaac aaaaacaacg cataatctgg
    16441 gacaaattga tgattaaagg caaactggcg ctcgtgacgt gcgcgctgac tctggtattc
    16501 acttcgtcgc ttttcgccgc gtcggacacg gcagatggtc gtaccctgaa gctggccatt
    16561 ggccctgagc caacggaagg ctttgatccc atgctgggct ggagccacgg cagctactta
    16621 ttgcttcatg cgccgttgct taagcaaaac gccgatatga gttggggtga tttactgacg
    16681 gaaaaagtgg ataccagccc cgacggtaaa atctggacgc taaccttaaa gcccgggctg
    16741 aaattctccg atggctcgcc attaactgcc gaagatgtcg tttttacata caataaagcg
    16801 gcgaagagcg gcggtaaaat tgacatgggc aattttagcc atgcgcgagc gctggatgcg
    16861 cgccgaattg agatgacgct gagccatccg cagagcacct ttgtgaatgt actcgggtcg
    16921 ttagggattg ttccggccag ccgttatgat gaaaaaacgt tcgcccgcga accgataggc
    16981 gccggtccat accgactggt cagctttcag ccgggtcagc aactgatcgt tgaagctaat
    17041 ccctggtatg cgggtaaaaa gaatgacttt aaccggctgg tttttgtctt tctggatgaa
    17101 gataatgctt atgccgccgc gcgcagcgga cagttgggac tggtgcgcat tgccccttct
    17161 atggcggtga ccccgcagca ggataatctt aaactctggg tacgcgatag cgttgaaaac
    17221 cggggcattg tcttcccgat ggtgcctgcc ggtaaaaagg atgctaacgg ttatcctgtc
    17281 ggcaacgatg tgaccgctga tgtcgctatc agacgcgcaa ttaactatgc cattaatcgt
    17341 aagcaactgg cggaacaggt gatggaaggc catgcgatac ccgcctatag cgcggtgcag
    17401 ggattaccgt ggcaaaatcc ttcagtggta ttcagcgatg gcgatattgc aaaagcgcgc
    17461 gccatcctgg aagaggctgg ctggaagata aacagtgcgg gcgtgcgtga aaaagcaggt
    17521 aaagaagcgc gtctgacctt atggtatgcc agtggcgaca gcacccgacg ggatctggcc
    17581 gaggcggtgc gcgccatgtt gcagcgttta ggcattgtcg tctcgttgca atcgggaagc
    17641 tgggaaactg tagagcgcca tatgcacgct aaccctacgc tgtttggctg gggaagtctg
    17701 gacccgatgg aactcttcca tcactacagt gggaaagccg ctggtgtgga atattataac
    17761 ccgggctatt acagcaaccc tgcggtagaa gcacatctga agcaggctat agatgcgcct
    17821 gactggcaaa aggcgatccc tttctggcag caggttgagt gggatgggaa gcagggcgcg
    17881 ggcgtccagg gcgatgcggc atgggcatgg ctgcttaata ttcagcatac ttatctggcc
    17941 aacccctgta ttgatctggg aaaaggctcg ccagaaatcc acggtagctg gtcggtgtta
    18001 aacaatcttg atgactggac ctggacctgt cggtgatgaa attgttcttc agtcattttt
    18061 tgcggctgat tattctgttg gtgctggtgg ctgccggcac cttcattttg cttagctttt
    18121 cgcccgttga tcctatccgt gcttatattg gcaacgatct gctccatgtt ccgccagaac
    18181 aatatgcgcg gattgcggcg cgctgggggc ttgaccagcc gctgtgggag cgtttcggtc
    18241 actggttttg gcgtctgctc cagggcgaca tggggtattc catgctgttc aacatgcctg
    18301 tcgccagcgt gatccgggaa cgttttgcga cgtcattcgc gctgctggca ggcgcctggc
    18361 tattgtctgg tgtgctgggc gtaacattgg gttttctggc cggacgtttt ctccaccgtt
    18421 ggccggataa gatgatttgc cgtatcagct acttattgtc atcgttgccc actttctgga
    18481 tagcaatgct gttgctggcg ctgtttgccg tccgctggcc ggtattacct gtttgttgcg
    18541 cctgggaccc cggaaataat gcaggaacag ctcttttatc ggaacgttta cgccatcttg
    18601 tgttgccggt atgtgcgtta agtctgttgg gcatggggca aattgcgctg catacgcgag
    18661 aaaaaatagc cagcgtaatg aagagcgaat ttattcgttt tgcgcgcgct cagggggata
    18721 aaggatggtc gctgttacgt caccaggtgt tacgtcatgc gattacccca gcgctctgct
    18781 tacagtttgc ttctctgggt gaactgatgg ggggagcgtt actggcagaa aaagtctttg
    18841 cgtatccggg gctgggacag gccactatcg atgccggcct gcgtggcgat gtcccgctac
    18901 tcatggggat cgttttattc tgtacgctat tagtgtttgc cggaaatacg atttcagcct
    18961 ggcttgtggt ggtgcttaat cgatcgctgg agcgtcccga tgctctataa tcctgccccg
    19021 acgttgtttc gtctgctcct ctccgttacc tgtctgctgt ttattgccgg atacggttat
    19081 gccacgttga gccagccgcc agaggttaat ctgcttgccc ggcatctgtc gcctgatatc
    19141 cagcactggt ttggcaccga taatctgggg cgcgatgtat ggcttcgttg ctttcagggg
    19201 gccttcacca gtttacaaat tggcgttggc gccgcgctgt gcagcggcgt tatcgcgtta
    19261 gtgatggcgg cagtggcgcg cattcatccc cggctggacc tcctggtgcg gctgataacc
    19321 gatgctatgc tcgccatgcc gcatttactt ttgctgatcc ttatctgttt tacgctcggc
    19381 ggcggtaaaa gcggcgtcat tgcggccgtg gcgttaacgc actggccccg tctggcgctg
    19441 attctgcgcg ccgacgcgga gcgggtagcg cagagtgact acctgacatt gacctatcgt
    19501 ctggggcatg gacaccttta ttgctggcga tatcactatt ttccggcgct attgccgcaa
    19561 tggttgacgg gaacgttatt gatgtttcct catgcggtat tgcacagcgc ggcgttaagt
    19621 tttctggggt ttgggctggc gccgcatgag ccttcgctgg ggctgttgct ggcggatgcg
    19681 ttacggttta ttagccatgg aaactggtgg ctggtgctat ttcccggcct aatgttattc
    19741 acgctggtga tgctcttcga tcagtttgcg cgcgccattc agcggctgtg gctaaggagt
    19801 gacgtatgct gagtttacaa cgggttacgc tggaaagcgc gcgttatcgc tggtatggcg
    19861 cgagacgctg gtcgccgtta ttacagaatg tctcttttga tatcgcgccc ggcgaaatgg
    19921 tggcattggt tggcggcagc ggggagggaa aaagtctgct gctgcaatgc ctgctcgatc
    19981 tgctgccgga aaacttacgt tttcggggtg agattacgct tgatggcaac cggctggaca
    20041 gacataccat caggcagctt aggggcaata cgtttagcta cgtgccgcag ggggtacagg
    20101 cgcttaatcc tatgctgaat atcagaaaac atttgaacag agcatgtcat ctgaccggac
    20161 gcgcctggga tgagacgcag atggtacagt tattacagca aagcgatctt gcaccgacag
    20221 tcctggaacg ctttccccgc cagctctccg gtgggatggc taaacgaatt ctggcgtgcc
    20281 acgcctcgct cagccaggca cgttatatcc tcgcggatga gatcaccgcc tggcttgata
    20341 cggcactggc aaaccagttg cttgagcact tgcgaggtct ctgcgagcgg ggatgcggcg
    20401 tgctgtgggt gactcatgac ctgctgctgg cggcgcggta tgccgatcgc attgtggcgc
    20461 tgcatcaggg ttatatcacg gacaatattc gctgtgaacg attacagccg gaagagatga
    20521 gtgagccgtt aaaacggcaa tggcaggcat tgcctgaact aaacccgtta tttatgccga
    20581 ccggagaggg aatagaatgc tgagctgccg cgacctcgtt attcgtcagg gcgggaaagt
    20641 cttatggcag aacctgacgt ttacgatttc tgccggtgaa cgggtaggaa ttcatgcgcc
    20701 aagcggaacg gggaaaacaa cgttggggcg cgtcctggcc ggatggcaaa agccgacgac
    20761 gggcgacgtt ctgctggacg gcagcccgtt acccctgcat cagtattgcc cggtacagct
    20821 ggtcccccag catcctgaac tgacgtttaa tccctggcga agcgccggag acgctgtgcg
    20881 tgatgcctgg cagcctgacc cggaaacgtt gagacgtttg tatgtgcagc ccgagtggct
    20941 gacgcgtcgg ccaatgcagc tctcaggcgg ggagttggcg cgtattgcga tactacgcgc
    21001 gcttgacccg cgagcgcgtt ttctgattgc cgacgaaatg acggcgcaac tcgatccgtc
    21061 tattcaaaaa gcgatatggg tatacgtgct tgaggtgtgc cgcagccgtt cattagggat
    21121 gttggtgatt aatcatcagt ctgcgctact tgatcaagtc tgtacccgcc atttacaggt
    21181 ggaatagccg caagtcgttt ctccgcattg tcgtgtcgcc gttaacgcac cgggagccca
    21241 tgggttcccg gtattgtcgg cagagatttt actgcatgac gcgtttatct gcgttttttg
    21301 catcagcggt attactgtag tccctggtct cttcaacctg tacaggggct ctgacgacca
    21361 gacttggcag cgccagttcg atatcattct caatgagttt ttcaataata cggatattta
    21421 tctcttgctg aatatccatg tatttattgt aatccgcggt attgacgata tgtaccacct
    21481 cataggtcag ccgatcctga ccaaaggcca gtagatgggc gcggtcgaat tgtgtttcgc
    21541 cgacatcggt aataatcttt ttcaccatat cgccgatgag gcgtaacttt tccggcggtg
    21601 tcgcagtggc aacgccaaaa gtaaacacga tacgacgcgt ttgcatccgc ttatagttgt
    21661 gtatggtttg ctgcaacaac tgcgcgttcg cacaaacgat ctgttcgccg ctgaggctac
    21721 ggatgcgagt ggttttcaaa ccgatatgtt caatcgtacc ggctacatca ttaaagacga
    21781 cgaaatcgcc gatctcgaag ggcttatcga aaccaatcga cagcgaagcg aagacatcgc
    21841 tcagaacggt ttgtaccgcc agggcaatag caataccgcc cacgccgagg ctggctacca
    21901 gtgcggtaat atccacgccg acgttcgcca ggatggagag caacatcata gaccagacga
    21961 gcacgcgcaa aatcatacca agaatgacta acgtcaccgg gtttttattg gagcctgggg
    22021 catacagtaa atgacgcatc catgactgta cgccctgatc aagccaaatc gccatttgaa
    22081 tcgcaaccac taaaaaccag gcgtgagaga gggtagagaa taaccggtcg ggcagggcga
    22141 caaagcgcag gctaaagaga aatgcggcaa aaaagatgag catcttactg gtctttttca
    22201 gcatctcgaa aacaataggc cgcagccgcc catgagcatc atccttttta tccgggcgtt
    22261 gtagcgcttt atagaccaca ttaagtagcc agttgatgag ccagtaagta atgagggtga
    22321 cgaaaaaaac gaccgccaga ttgatccaga acgtcgttga catcagcatc gcaacgatat
    22381 ttagtcgtgc taaatactcc attttacctc cgatgaaaag cagatgaaca ttacagtata
    22441 gacgtcacat cacggaggcc gatttccggc tttactattg ctgttttatt cagcactttt
    22501 gttcaaaaag catgaaaaag aggggtagcc gtttggctat cccggcgttt ctgtgcagac
    22561 ttatctactc ctcttaataa aataaggagt catttatgca acaagaacat cgagagtgta
    22621 ttgagcagtg ttatgaatgc gcggcggcgt gtgatatctg cgcctcttct tgtctgcgtg
    22681 aagataacgt cgaaatgatg aagcattgca tcgagttaga tatgcaatgt gcggccattt
    22741 gtcgcctggc ggcgcaattt atggcattgg aaagcgagta ctcacaaaaa ttatgccgcc
    22801 tgtgcgcgga tatctgcaaa gcctgcgccg aagagtgtgc aaggcacgat cacgaccatt
    22861 gccagaattg cgcgcgggca tgcagccaat gcgcagacgc ctgccttaaa atggccgcgt
    22921 aatttttctt ccgccattag ctcaaccgga tagagcatag agcttctacc tctaaggttc
    22981 ggggttcaat tcctcgatgg cggaccagtt gatatcaaaa aaggccacct gcgcggtggc
    23041 cgctgagttt ctgttgaaat aaatgcaatg ttataatata acaatcatct ttctaagaaa
    23101 gatgagggta acgttttggt gattcattta aaaaaactga caatgcttct gggaatgctg
    23161 ttggtcaata gtcctgcctt cgcgcatggt catcatgctc atggcgcgcc gatgacggag
    23221 gttgagcaaa aagcggcagc gggtgtgttt gatgacgcta atgtacgcga tcgcgcgctc
    23281 accgactggg atggtatgtg gcaatccgtc tatccttatc tggtcagcgg cgagctggac
    23341 cctgtcttca gacaaaaggc gaagaaagac ccggagaaaa cgtttgagga tattaaagcg
    23401 tattatcgca aaggatacgc gacgaatgtt gagactatcg gtattgaaaa tggcgttata
    23461 gaattccatc gcgacaataa cgttgcatcc tgtaaataca attatgccgg ctataaaatt
    23521 ctgacttacg catcgggtaa aaaaggggtg cgctacctgt tcgaatgtaa agatgcgaat
    23581 agcaaagcgc ctaaatatgt tcagtttagc gatcatatca ttgccccgcg caaatcggcg
    23641 cacttccata tctttatggg aaatacctcg caacaggcat tgttgcaaga gatggaaaac
    23701 tggcctacct attatcctta tcagttaaag gcgaatgagg tcgttgacga aatgctacat
    23761 cattaagtct gattgcaatg ttaaaagctc gctatgaata gcgagctttt tttctgccgt
    23821 tatgccatat ttctggcaat caatataaaa aatacctgcg cccccggagc aacgatgacg
    23881 ctgtccatac cgccctcgat tcaatgccaa acggaagcgg cgtgtcgcct gattactcgt
    23941 gtcacaggcg atacgttgcg tgctattcat ttatatggtt ccgctgtcgc gggcgatctg
    24001 aagccaaaca gcgacattga tctgctggtg acaatatgcc agccgctgac ggagacccaa
    24061 cgcgcaacgc tgatgcagga attgctggcg ctttcatcgc cgccgggggc gtcagcagaa
    24121 aaacgcgctc tggaggtcac tgtcgtgctt tattcgcagc tggttccctg gtgttttcca
    24181 ccttcccggg aaatgcaatt tggcgagtgg ctaagagagg acatttatca ggggatttat
    24241 gaaccagcgc agcaggactg ggacatggtg ttactgataa cccaaattct ggaaaccagt
    24301 ataccgctaa agggagaacg cgcggaacgg ctgttcacgc cagcccctgc ggcgcagttg
    24361 ctgaaggcct tgcgttatcc cctcgacctt tggcaatcca cggcagatgt gcagggagat
    24421 gagtatcata tcgttttaac cctggcgcgt atctggtaca ccctttctac cgggagattt
    24481 acctctaagg atgcggcggc tgactggctg ttacctcagt tgccagaaga gtatgctgct
    24541 acgttgcgtg cggcgcagcg tgaatattta ggtctggagc aacaggactg gcatattttg
    24601 ctgcctgcgg tcgtacgctt tgtggatttt gcgaaagcgt acatccccac gcagttcaca
    24661 taagatgccc caggacgtct gtcaggttgc gcaaacggcg ttcctcaact actacttaat
    24721 aggttctcat cgctgaagta agcagatgat cttatgcggg ccatcgaatg gatattccca
    24781 catggctctc gttttgttga ggtggatatg actggttccg catcatctgt tttaaagaca
    24841 gatacaagac tattgagcga aaacctgttt cttaattatg gtctggagtc cttatttaag
    24901 gacgtcgcaa taatagctgg caacgtaaat tatattgttt ttgatatcga cgattactac
    24961 accgtacagc agtatattac ttccacattt aaaacggtac tcattgggat tgttacccat
    25021 aatgaatata actttattga tgaacatcat gctatatatc gaataaaggt cgatgcctct
    25081 attgctgagt ggcgcgaatt actgattttg gccgctgctg gtcaattttt tcccagatca
    25141 gagaaagtca gattaacggc gaatgaaaga aatgttttgg cgatgcttgt taaaggaatg
    25201 gatatccgac aaataagctg tgagctgaat gtacatttaa aaactattta ctcagtacgc
    25261 taccatgtcc tgactaaatt aggttgtaga acagttctgg attatcaaat actgtccgtc
    25321 tctaaagcct ttacgcactg gcttacaata aataatgtcg ataatgtaat tttccgtgta
    25381 aatagcaagg tcattgctta ataatgattt gcttctgatg gcgtttaggt tcactatgct
    25441 ttcttacatc atcatgaggc cagacaggca tggctacttt tagtattagc gcaatggcgg
    25501 cgcagtgtgg tgtcacaaca gcaaatatca ggtcctggga acgctatggc ctgcttcaac
    25561 ctaccaaaga tgaagctggc aatcgttttt attgcataga agatgctatc agaatacagc
    25621 atattatcga cgcgttaagc aaaggcttct cattaaaaga gattaaacct gccctctatg
    25681 gtgaagaaac gcattgccgc tcgggatggt tattctacca ggaagagatt ttagcgcagt
    25741 gtagaaaatt cgaacccgcc aaattgcgaa aattactctg gcgttatggt cgggaaattc
    25801 cgccgtgtat cgtaattgag tcaatactgc gtcctttatg gctgtggttg tccgcaggcg
    25861 atgatgatgc acgccgattt gaaaaggcat tactggatac tgcgattatt gaatacgcca
    25921 cgttccagct aagtagcgta cgaaaggcgc cagcaggcac aatgcttatt gctgcgtttt
    25981 cgctgaacga ccccattgag ctatggctgg aaacgattaa atattgtagt gaaggtatgc
    26041 gagttgaagt catcccctgg caggcgccga tgcccgatct tttatcaacg tctttcgagc
    26101 atattgtttt gtggcatgat gagacattaa ctcccgccca ggaaaatctt attcaggctt
    26161 taaaagaatc gggtaaattt agtcttcatg tgaaaaatgg ctcaggctta acattactgc
    26221 cagccgtata ccggcagcat gagatgcccg aaagcatgca gcatgttgca ccgcaaatcc
    26281 atgcaaacgg ctacgaaaaa tcaggcaccg cacgttgagg catctgcatt attaacgaac
    26341 aggggaggag taaccccctc ccttgtttat acccttcata cttcaagttg cttatgtgtt
    26401 ggctacggat tactcggccc atccataggc ctcgccctga cgggccgtcg caagcgacgt
    26461 tcaaatctgc tcccggcaga tttgtcgttc accccagtca catagttatc tatgctcctg
    26521 gggactcact cccttgccgc cttttagcaa cacgaattat tttgggtata tattagatgt
    26581 cgtcaggtgt ctgaaaaaaa acggcttcta aggcattgcg gtaaatatca agctgcacta
    26641 cgtctttttc tgtttccagt ttttcaataa gtttggcgat gatatcctta tttgagacat
    26701 gctgctgcga ttgcaatagt tcgtaagtaa tttcctgaat agctcgctgt tcacataaca
    26761 tatgtgcaga aaaaggattg ccagtactat tttgttcgtt gactagtgta atggtagtca
    26821 tatttcacca tattcgatgt aaattgaagc cgatctccct gagcggggga gagaaattag
    26881 tgacctatta aagttagacc tatatcataa aactgtaata aaaaatcata aaaacgtgat
    26941 gtgcatcaca tttgtgtgat ttgttgtata ttttatacac tttaaatgaa ggtgaagatt
    27001 ccgcagaatc aacggcctgt tcttttttct cactccagtt taaacgaata agcattaata
    27061 cccatctgta ataattactt aatgttatct taataaaggt aaattactgt cagacctccg
    27121 taaaaggagg ttgattaatg attcgtcata tcgccatttt tctttgttct ttattgatgt
    27181 gcagcaccac ttttgccgat tcggtaacgt cggtatcgct tggcgcgctc ttaaccgcgc
    27241 tcaatgaacg catgttatta atgaaagatg tggctgctta taaaatgaag caccatctgc
    27301 cgatagagga tttcacacgt gaacaaaatg tttttgccga ggctgaagaa gaagcgaaaa
    27361 ataacggtct ggacccgcat tcgataaccc cttttattcg ttcgctaatg gatgccagta
    27421 aagcgataca gtaccgctat ttagcgcagt ggcgaaccgg ctcagaaccc tcctttccga
    27481 tacaaacctt gtcggtcacc cggcaacgta ttcgacaact tgataatcaa atgttgatca
    27541 ttatcagcca gcgcctgatg gtcggcgctt tcagccatga ggatatggtg tggctgagaa
    27601 cgcactttaa tgcgccgaat ctgaatgaga gcgatatcag tgatgtgttg gcagccctat
    27661 ctttggtgcg acacgcgcgt taatccccca tgaggaaacg tgggccaata cctggtgatt
    27721 gcctgcgggg gcgcgataaa agaacgtttt tgggtgatgg ggatataagc gtggcggaat
    27781 agcggctgga gagacgtggt ttcgcttccc atcttccgat gcattcgtta gcatactgtt
    27841 tcgcagctaa gcgtaaatgt tttcaggaag aggttaatgt gttcgcggag tatggtgttc
    27901 tgaattattg gacgtacctg gtcggggcga tttttatcgt tctggtacca gggccgaata
    27961 cgctttttgt gcttaaaaat agcgtgggac gcggggttaa aggaggatat cttgccgcat
    28021 gtggcgtgtt tatcggtgat gcgatattaa tgtttctggc gtatgcgggc gtggcgacgc
    28081 tgatcaaaac aacgccggtt ctgtttaaca ttgttcgcta tctcggcgcg ttttatctgc
    28141 tctaccttgg cgcaaaaatc ctttacgcca ctctgacctc aaaagggcgt gcggcgacgg
    28201 aaacggtagt tccttttggc gctattttta agcgtgcttt aattcttagc ctgacgaatc
    28261 ctaaagccat acttttttat gtttcctttt ttgtgcaatt tattgatgtt actgcgccgc
    28321 atactggggt gtcatttttt attttggcca ccacccttga aatcgtcagt ttttgctatc
    28381 tgagcttttt aattctttct ggcgcttttg taacccacta tattggtacc aaaaagaaac
    28441 tggcaaaagt gggcaattcg ttgattggcc ttcttttcgt cggatttgcc gcccggctgg
    28501 caacgctcca gtcttaaccc cctggacccg tcgtgaacgg cgggtcattg ctctcctttc
    28561 ggttttattg cgtggaaaac agcaaaatag taaccaataa atggtattta aaatgctgtt
    28621 tttggagcgt aaccttttta cgacagcgat gagattatcg ctgagtaacc tgcgggaaga
    28681 gggaagcaaa tgcggcaaat tccacaaaat catatccata cacgttccac gcccttctgg
    28741 aacaaagaga cggcgcctgc cggaattttc gaacgccacc ttgataaggg aacgcgaccc
    28801 ggcgtttatc ctcgcctctc ggtgatgcag ggggcggtca aatatctcgg atacgctgat
    28861 gaacattgct ctgagccgga agagatcatg gtgatcaatg ccggcgagtt tggcgtgttt
    28921 cctccggaaa agtggcacaa tattgaggtc atgacggatg atacctattt taacatcgac
    28981 ttttttgtcg cgccggaagt actgatggaa ggggcgacct cacgaaaagt cattcatgcc
    29041 gggagagaat aataatggga aaagctactt ataccgtcac ggtcacgaat aatagcaacg
    29101 gcgtctctgt ggactatgaa acggaagcac cgatgacgtt gctggtacct gaagttacag
    29161 cagaagttgt gaaggatttg gtcaataccg tgcgttccta cgataccgaa aacgaacacg
    29221 acgtttgcgg ttggtaaaga tgctgtagta tctatttgat ataaaatgat tctttaaatg
    29281 agaagccgca tcgcgcgtcg ccagcgtgat gcggtttttg cgtattgaaa agcgctgttt
    29341 atttacatca gacatgggtt gaaaagaaac attaagaaaa cattaagaat atcgcattgt
    29401 ttgctaatga gagcgtattc ataaaactta tgattgggta ttaaaaacca gaagagtctt
    29461 atgatcatga aactcgatac ccgattaact tcgtcagcac ttactcttgc gcttgccgct
    29521 gtggtcatcc cgtttacggc ggactggcaa ttgcctttgc ttaacggcgt ggtggtccga
    29581 tggattgaaa acggacaagc gttatggtta ctgtttgggg cgctatttac cgcctggtat
    29641 atacggccac tttcccgtcc cgaaggggca aagcagtttt ggctatgggc tgttgtctgg
    29701 tgggtggtgc tgttgggtag aagcaccagt tgggggcgtg actatttccc tgacgagccg
    29761 cgtatgctgt tcagaacgat ttcagtgcta ttaattgctg cgttggtatt gccagtcctg
    29821 ttttttgccg ggctacgtaa ggagattgtt cgtcgtctgc gggacgttcc tctgccattg
    29881 tggctgttta ccgtgacggc atgttcatat ctgatttccg acactgtcga gcatcatcgg
    29941 tggttgtcgc cgatattcct gcataacgct cgttacacag atttgattga agagctttat
    30001 gaagtgccat ttatgatcgg tttgtttatg gtgaccgtgg ggtttatgca gcaggacaag
    30061 caggatgaat gtactgcgct ggagctgacc ccgtatcacg caaaatagcg cggctgaaaa
    30121 agaccatgaa ttcgatatgg gatagatagc agttagcaaa aaaagcccgc actcggtgag
    30181 gcgggcaaat aatactggaa gcaatgtgag caatgtcgta ccgaacaggt gggttataaa
    30241 ctcaaccact cggtattgat aaagataatc gttatcatta atgattgcaa ccctgatatt
    30301 tatgcgcttt tatccacgac gctaaaaggt gatggatatc acaaacttca ctttcctgac
    30361 gatgtgctat tctttttaac ggcaaataaa ccgctaacgt taagacataa gtgaggaaaa
    30421 aatgggtatt ctttcatgga ttatttttgg acttattgcg ggtattttgg ctaagtggat
    30481 catgccaggt aaagatggcg gcggattctt tatgacgatc attctgggga tcgtcggtgc
    30541 ggtagtcgga ggatggatca gtacgttctt tggctttggc aaagtggatg gtttcaactt
    30601 cggcagcttt gcagtcgcgg tgatcggcgc gattgttgtg ctgttaatct acagaaaaat
    30661 caaaagctaa acgcagaact ttcagagata ataaaggcta cgacaggtag cctt
//
LOCUS       DAGWFR010000030        30710 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.030, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000030 DAGWFR010000000
VERSION     DAGWFR010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 30710)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30710)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30710
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.030"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..1310)
                     /locus_tag="MOX77_001476"
     CDS             complement(<1..1310)
                     /locus_tag="MOX77_001476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001559634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone HscA"
                     /protein_id="HCA3357049.1"
                     /translation="MALLQISEPGLSAAPHQRRLAAGIDLGTTNSLVATVRSGQAETL
                     PDHEGRHLLPSVVHYQQQGHTVGYAARDNAAQDTANTISSVKRMMGRSLADIQARYPH
                     LPYRFKASVNGLPMIDTAAGLLNPVRVSADILKALAARASESLSGELDGVVITVPAYF
                     DDAQRQGTKDAARLAGLHVLRLLNEPTAAAIAYGLDSGKEGVIAVYDLGGGTFDISIL
                     RLSRGVFEVLATGGDSALGGDDFDHLLADYIREQAGIADRSDNRVQRELLDAAITAKI
                     ALSDADTVRVNVAGWQGEITREQFNDLISALVKRTLLACRRALKDAGVEPQDVLEVVM
                     VGGSTRVPLVRERVGEFFGRTPLTAIDPDKVIAIGAAIQADILVGNKPDSEMLLLDVI
                     PLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDSQTAMSIHV"
     gene            complement(1323..1838)
                     /gene="hscB"
                     /locus_tag="MOX77_001477"
     CDS             complement(1323..1838)
                     /gene="hscB"
                     /locus_tag="MOX77_001477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone HscB"
                     /protein_id="HCA3357050.1"
                     /translation="MDYFTLFGLPARYQIDTQALSFRFQDLQRQYHPDKFANGTQAQQ
                     LAAVQQSATINQAWQTLRHPLTRAEYLLSLHGFDLASEQHTVRDTAFLMEQLTLREEL
                     DDIEQSKDDARLESFIKRVQKMFDARLQQMVEQLDNAAWDAAADTVRKLRFLDKLRSS
                     AEQLEEKLLDF"
     gene            complement(2035..2358)
                     /gene="iscA"
                     /locus_tag="MOX77_001478"
     CDS             complement(2035..2358)
                     /gene="iscA"
                     /locus_tag="MOX77_001478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly protein IscA"
                     /protein_id="HCA3357051.1"
                     /translation="MSITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEF
                     VDEPTAEDTVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFSNPNVKDECGCG
                     ESFHV"
     gene            complement(2387..2773)
                     /gene="iscU"
                     /locus_tag="MOX77_001479"
     CDS             complement(2387..2773)
                     /gene="iscU"
                     /locus_tag="MOX77_001479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000331707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly scaffold IscU"
                     /protein_id="HCA3357052.1"
                     /translation="MAYSEKVIDHYENPRNVGSFDNNDDNVGSGMVGAPACGDVMKLQ
                     IKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIADELELPPV
                     KIHCSILAEDAIKAAIADYKSKREAK"
     gene            complement(2801..4015)
                     /gene="iscS"
                     /locus_tag="MOX77_001480"
     CDS             complement(2801..4015)
                     /gene="iscS"
                     /locus_tag="MOX77_001480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017459011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HCA3357053.1"
                     /translation="MKLPIYLDYSATTPVDPRVAEKMMQFLTLDGTFGNPASRSHRFG
                     WQAEEAVDIARNQIAELVGADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKT
                     EHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLNELEAAMRDDTILVSIMHVNNEIGVV
                     QDIATIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYV
                     RRKPRIRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMETEMARLRGLRNR
                     LWNGIKDIEEVYLNGDLEQGAPNILNVSFNYVEGESLIMALKDLAVSSGSACTSATLE
                     PSYVLRALGMNDELAHSSIRFSLGRFTTEEEIDYTIDLVRKSIGRLRDLSPLWEMYKQ
                     GVDLNSIEWAHH"
     gene            complement(4196..4690)
                     /gene="iscR"
                     /locus_tag="MOX77_001481"
     CDS             complement(4196..4690)
                     /gene="iscR"
                     /locus_tag="MOX77_001481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001241352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly transcriptional regulator
                     IscR"
                     /protein_id="HCA3357054.1"
                     /translation="MRLTSKGRYAVTAMLDVALNSEAGPVPLADISERQGISLSYLEQ
                     LFSRLRKNGLVSSVRGPGGGYLLGKDAGSIAVGEVISAVDESVDATRCQGKGGCQGGD
                     KCLTHALWRDLSDRLTGFLNNITLGELVNNQEVLDVSGRQHTHDAPRASGRAQDAIDV
                     KLRA"
     gene            complement(4932..5663)
                     /gene="trmJ"
                     /locus_tag="MOX77_001482"
     CDS             complement(4932..5663)
                     /gene="trmJ"
                     /locus_tag="MOX77_001482"
                     /EC_number="2.1.1.200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ"
                     /protein_id="HCA3357055.1"
                     /translation="MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS
                     QAIALAAGASDVIGNAQIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVA
                     EAANTPVALVFGRERVGLTNDELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW
                     LATQENGDAADHEETPYPLVDDLERFYGHLEQTLLSTGFIRENHPGQVMNKLRRLFTR
                     ARPESQELNILRGILASIEQQNKGK"
     gene            5782..6585
                     /gene="suhB"
                     /locus_tag="MOX77_001483"
     CDS             5782..6585
                     /gene="suhB"
                     /locus_tag="MOX77_001483"
                     /EC_number="3.1.3.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000553460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol-1-monophosphatase"
                     /protein_id="HCA3357056.1"
                     /translation="MHPMLTIAVRAARKAGNVIAKNYETPDAAEASQKGSNDFVTNVD
                     KAAEAVIIDTIRKSYPQHTIITEESGEHVGTDQDVQWVIDPLDGTTNFIKRLPHFSVS
                     IAVHIKGRTEVAVVYDPMRNELFTATRGQGAQLNGYRLRGSTARDLDGTILATGFPFK
                     AKQYATTYINIIGKLFTECADFRRTGSAALDLAYVAAGRVDGFFEIGLRPWDFAAGEL
                     LVREAGGIVSDFTGGHNYMMTGNIVAGNPRVVKAMLANMRDELSDALKR"
     gene            6730..7608
                     /locus_tag="MOX77_001484"
     CDS             6730..7608
                     /locus_tag="MOX77_001484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HCA3357057.1"
                     /translation="MTLQHTRRIVKSLFILFIIVVCIYLLPRVAINAFYYPDNKVYGP
                     TPAEAESITFTAKDGTHLHGWFIPTAFGRPENAVATVIHVHGNAGNMSAHWPLVSWLP
                     ERNVNLFMFDYRGFGESEGTPSQEGLLNDTKSAIDYVRHRADVNPERLVLLGQSLGGN
                     NVLAAVGHCVGCANMRYADQAGIRAIVLDSTFSSYSSIANQMIPGSGYLLDDRYSADR
                     NIASVSPIPVLILHGTADHVIPWQDSEKLYALAREPKQKIFIPDGDHIDAFSGRYANL
                     YRDAMINFIQTALSAK"
     gene            7790..8833
                     /gene="asrA"
                     /locus_tag="MOX77_001485"
     CDS             7790..8833
                     /gene="asrA"
                     /locus_tag="MOX77_001485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic sulfite reductase subunit A"
                     /protein_id="HCA3357058.1"
                     /translation="MAIKITPDEFSLLIQRLNKKWRVFAPSAEFRGGRFSDTDNIIYQ
                     RISGWRDLIWHEKSHMSPNTIIAPITETLFYFDKNTIQIAETDTSPIIIFARACDINA
                     MSRLDYMYLSNGNNSDYSYQLLREHIRFVLIECEESFENCFCVSMGTNKTDCYSAAMR
                     FSDEGALVSIRDPFIEAAIQGLGQEADYTPSFVSENRETVVTPDSVCRDPQKIRDILT
                     RHPLWDAYDSRCISCGRCTTGCPTCTCYSVFDVAYDENPQRGERRRQWASCMVPGFSD
                     MAGGHGFREKPGERLRYRALHKVNDYKARNGIEHMCVGCGRCDDRCPQYIKFSLIINK
                     MTAAVRQALAEEA"
     gene            8837..9655
                     /gene="asrB"
                     /locus_tag="MOX77_001486"
     CDS             8837..9655
                     /gene="asrB"
                     /locus_tag="MOX77_001486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic sulfite reductase subunit B"
                     /protein_id="HCA3357059.1"
                     /translation="MSHCSCHDKPQHSLLPAAYRILSITRHTPLEWNFRVAVDFPAHW
                     GQFVEVSLPRVGEAPISVSDYGDGWIDLLIRNVGKVTSALFTLKEGDNVWLRGCYGNG
                     YPVDTLRHKPLLVVAGGTGVAPVKGLMRYFVENPQEIGQLDMILGYKNRDCVLYKEEM
                     ATWHGKHNLVLTLDEGEADDRYQIGRVTDRLADMTLSDIDTMQAIVVGPPIMITFTVK
                     MLLQKGLKPEQIWVDYERRMACSVGKCGHCRMGEVYVCTDGPIFNYAVAQRFAD"
     gene            9666..10679
                     /gene="asrC"
                     /locus_tag="MOX77_001487"
     CDS             9666..10679
                     /gene="asrC"
                     /locus_tag="MOX77_001487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite reductase subunit C"
                     /protein_id="HCA3357060.1"
                     /translation="MSIDIDIIKARAKNEYRLSKVRGEAMISVRIPGGILPAHLLTVA
                     RDIAETWGNGQIHLTTRQKLAMPGIRYEDIDNVNAALEPFLREIEIELCDVQVEDTKA
                     GYLAIGGRNIVACQGNRICQKANTDTTGLSRRLEKLVYPSPYHLKTVIVGCPNDCAKA
                     SMADLGIIGVAKMRFTADRCIGCGACVKACSHHAVGCLALKNGKAVKEESACIGCGEC
                     VLACPTLAWQRKPDQLWQVRLGGRTSKKTPRVGKLFLNWVTEDVIKQVIVNLYEFEKE
                     MLGGKPIYLHMGHLIDKGGYLRFKERVLRGVQLNPEAMVAERIYWAEDESVARMHLKP
                     AGH"
     gene            complement(10680..11665)
                     /locus_tag="MOX77_001488"
                     /pseudo
     CDS             complement(10680..11665)
                     /locus_tag="MOX77_001488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461486.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nickel/cobalt transporter"
     gene            complement(11656..12294)
                     /locus_tag="MOX77_001489"
     CDS             complement(11656..12294)
                     /locus_tag="MOX77_001489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1007 family protein"
                     /protein_id="HCA3357061.1"
                     /translation="MKPVKRSALILFLAVLSFVAAAHPHSFIRLQTQVVSENEQFVAL
                     KMRWTMDALTSADLLYDAGNAAPGSEIWKKLAAEVMANVLGQHYFTEVWRNGAKVKFK
                     NRPTEYGMTRDAHQAVLTFTLPLAEPQPLSGQTYTFSTFDPSYYVDMHYDQDSDITMP
                     EPLREKCRIQVYTPAPGEETLRFAQSLDKEDAPPEDMDLGKQFAQTVTLQCQ"
     gene            12420..13697
                     /gene="csiE"
                     /locus_tag="MOX77_001490"
     CDS             12420..13697
                     /gene="csiE"
                     /locus_tag="MOX77_001490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stationary phase inducible protein CsiE"
                     /protein_id="HCA3357062.1"
                     /translation="MMPTIAPPSVLSAPQRRCQVLLTLFQPEPIATVEIFSALNGVDD
                     DTAREDITDTSLEIQRYHRLAITTCQNGCYRIEGTALDQRLCLLHWLRRGLRLCPTFV
                     TQQFTPALKNALKQRGIARPLYDDINLHALINLCARRLQKPFEHRDVQFLRLFLQYCL
                     LQHHAGITPEFNPVQQIWAQSCAEYPLAQEIGRHWQRHVMQAAPLNEALFMALLFSMI
                     RLPDPIRDTHQRAQQLRLEVARLVLRFREKGNVRFSDEQGLNDQLYVHLAQALNRSLF
                     TIGIDNTLPEEFNRLYPRLVRTTREALAGFEAEYGIHFSEEETGLVAVIFGAWLMQDN
                     DLHERQIVLLADKNDALETHIEQQLRELTLLPLNIRRISLQAFQKEGCPRGVALIVTP
                     YATPLPLFSPPLIHADRALTEHQQQQIRKILES"
     gene            complement(13692..14831)
                     /locus_tag="MOX77_001491"
     CDS             complement(13692..14831)
                     /locus_tag="MOX77_001491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phenylpropionate MFS transporter"
                     /protein_id="HCA3357063.1"
                     /translation="MALHSTRWLALSYFTYFFSYGIFLPFWSVWLKGLGLTPETIGLL
                     LGVGLVARFLGSLLIAPRVSDPSRLISALRVLALLTLVFALAFWAGTHVAWLMVVMVG
                     FNLFFSPLVPLTDALANTWQKQITLDYGRVRLWGSIAFVIGSALTGKLVSLYDYQAIL
                     ALLTLGVASMLLGMLLRPSVPPQGESRQQESAGWPAWRTLVAQSWRFLACVCLLQGAH
                     AAYYGFSAIYWQGAGYSASAVGYLWSLGVVAEVIIFALSKKLFRRFSARDLLLLSAVC
                     GVVRWGLMGWSTALPWLIVIQILHCGTFTVCHLAAMRYIAARQGSEVIRLQAVYSAVA
                     MGGSIAIMTVFAGFLYQHLGGGVFWIMALVALPAIFLRPKVVAAS"
     gene            complement(15016..16269)
                     /locus_tag="MOX77_001492"
     CDS             complement(15016..16269)
                     /locus_tag="MOX77_001492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019077397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HCA3357064.1"
                     /translation="MLKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVM
                     QAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHSGSQAN
                     FAVYTALLQPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYDEMAK
                     LAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVP
                     HAHVVTTTTHKTLAGPRGGLILAKGGDEELYKKLNSAVFPSAQGGPLMHVIAGKAVAL
                     KEAMEPEFKVYQQQVAKNAKAMVEVFLNRGYKVVSGGTENHLFLLDLVDKNLTGKEAD
                     AALGRANITVNKNSVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDN
                     INDEATIERVKAKVLDICARFPVYA"
     gene            16594..17784
                     /gene="hmpA"
                     /locus_tag="MOX77_001493"
     CDS             16594..17784
                     /gene="hmpA"
                     /locus_tag="MOX77_001493"
                     /EC_number="1.14.12.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NO-inducible flavohemoprotein"
                     /protein_id="HCA3357065.1"
                     /translation="MLDAQTIATVKATIPLLVETGPKLTAHFYDRMFTHNPELKEIFN
                     MSNQRNGDQREALFNAIAAYASNIENLPALLPAVEKIAQKHTSFQIKPEQYNIVGTHL
                     LATLDEMFNPGQEVLDAWGKAYGVLANVFIHREAEIYHENASKDGGWEGTRPFRIVAK
                     TPRSALITSFEFEPVDGGTVAEYRPGQYLGVWLKPEGFAHQEIRQYSLTRKPDGKGYR
                     IAVKREDGGQVSNWLHHHANVGDVVHLAAPAGDFFMNVAADTPVSLISAGVGQTPMLA
                     MLDTLAKEQHTAQVNWFHAAENGDVHAFADEVSELGRTLPRFTAHTWYREPTEADRAQ
                     RVFDSEGLMDLSKLEAAISDPAMQFYLCGPVGFMQFAAKQLVSLGVNNENIHYECFGP
                     HKVL"
     gene            17965..19509
                     /gene="cadC"
                     /locus_tag="MOX77_001494"
     CDS             17965..19509
                     /gene="cadC"
                     /locus_tag="MOX77_001494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine decarboxylation/transport transcriptional
                     activator CadC"
                     /protein_id="HCA3357066.1"
                     /translation="MQQPVVRIGEWLVTPSVNQISRQGRQITLEPRLIDLLMYFAHHP
                     DEVLSRDNIIDHVWMRTIVTNHVVTQSISELRKSLRDGGDSNAEYIVTVPKRGYKLTA
                     PVIWCEENSDEIDNLSTSPPPPIAATNAEPTEGVPAAAPVPPASLQTPTKKAKKPRIA
                     AFWTWVMFLLSLATLVVFIVMSVVDHNAAVTKTRLLLNPRDIDVRFEGGNSCNNWVSQ
                     ESYAIGLGGLITDLLNTYSTFMVHDKTNYRVNEPSNSGKTLTIQFVNQRHYRAQQCFM
                     SVVLIDNADGSTMLDKRYFVTNTNQLSIQDDLFNSLSFVLTQPWPNRMREQLALFRTP
                     QNTALMRFYEARQLILSGDAQALSKAGDILNGIIKETPDFNYAYEYKVLVDVLRQSQQ
                     PFDKEQVAALNEEFKKIDQIPGVEKTSVYYKIKTVDLLGKGDIDAAYEEINKSIELEM
                     SWFNYVLLGKVYEMKGENRLAADAYLTAFNLRPGENTLYWIENGVFQTSVQKIVPYLN
                     SFLAED"
     gene            19858..21189
                     /gene="cadB"
                     /locus_tag="MOX77_001495"
     CDS             19858..21189
                     /gene="cadB"
                     /locus_tag="MOX77_001495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cadaverine/lysine antiporter"
                     /protein_id="HCA3357067.1"
                     /translation="MSSVKKIGLFACTGVVAGNMMGSGIALLPANLASIGGIAIWGWV
                     ISIIGAMSLAYVYARLATKNPQQGGPIAYAGEISPAFGFQTGVLYYHANWIGNLAIGI
                     TAVSYLSTFFPALNNPIPAGIACIAIVWLFTFINMLGGAWVSRLTTIGLFLVLIPVVL
                     TAVAGWHWFAIATYHANWNTSTTTDSHAIVKSILLCLWAFVGVESAAVSTGMVKNPKR
                     TVPLATMLGTALAGIIYIAATQVIAGMFPASVMASSGAPFAISTSTILGGWAAPLVSA
                     FTAFACLTSLGSWMMLVGQAGVRAANDGNFPKIYGEMDKNGIPKKGLLLAAVKMTALM
                     ILITIMNSSGGKASDLFGELTGIAVLLTMLPYFYSCVDLIRFEGFNIRNSVSLICSVL
                     GCAFCFIALMGASSFELSGTFIVSLIILMFYGRKMHQRQNNDSDNNTAEAL"
     gene            21272..23416
                     /gene="cadA"
                     /locus_tag="MOX77_001496"
     CDS             21272..23416
                     /gene="cadA"
                     /locus_tag="MOX77_001496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine decarboxylase CadA"
                     /protein_id="HCA3357068.1"
                     /translation="MNVIAIMNHMGVYFKEEPIRELHRALEGLNFRIVYPNDREDLLK
                     LIENNSRLCGVIFDWDKYNLELCEEISKLNEYMPLYAFANSYSTLDVSLNDLRMQVRF
                     FEYALGAAADIAAKIRQNTDEYIDNILPPLTKALFKYVREGKYTFCTPGHMGGTAFQK
                     SPVGSIFYDFFGPNTMKSDISISVSELGSLLDHSGPHKEAEEYIARVFNAERSYMVTN
                     GTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDITPIYFRPTRNAYGILGGIP
                     QSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDYIKKTLDVKSIHFDSAWV
                     PYTNFSPIYQGKCGMSGDRVEGKIIYETQSTHKLLAAFSQASMIHVKGDINEETFNEA
                     YMMHTTTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLKSESDGWF
                     FDVWQPEHIDGAECWPLRSDSAWHGFKNIDNEHMYLDPIKVTILTPGMKKDGTMDEFG
                     IPASLVAKYLDERGIIVEKTGPYNLLFLFSIGIDKTKALSLLRALTEFKRAFDLNLRV
                     KNILPALYREAPEFYENMRIQELAQNIHKLVEHHNLPDLMYRAFEVLPKMVMTPYTAF
                     QKELHGETEEVYLEEMVGRVNANMILPYPPGVPLVMPGEMITEESRPVLEFLQMLCEI
                     GAHYPGFETDIHGAYRQADGRYTVKVLKENTK"
     gene            23472..24932
                     /gene="dtpD"
                     /locus_tag="MOX77_001497"
     CDS             23472..24932
                     /gene="dtpD"
                     /locus_tag="MOX77_001497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide permease DtpD"
                     /protein_id="HCA3357069.1"
                     /translation="MKTPSQPRAIFYIVAIQIWEYFSFYGMRALLILYLTHQLGFNDS
                     HAINLFSAYASLVYVTPILGGWLADRLLGNRVAVITGALLMTLGHVVLGLESDSTLSL
                     YAALAIIICGYGLFKSNISCLLGELYAPDDNRRDGGFSLLYAAGNIGSIAAPIACGLA
                     AQWYGWHVGFALAGVGMFIGLLIFLSGHRHFQQTRGVNRPALRAVKFALPTWGWLVLM
                     LCIAPVFFTLLLENNWSGYVLAIVCVFAAQLIARIMVKFPEHRRALWQIVLLMITGTL
                     FWVLAQQGGSSISLFIDRFVNRHWLNMTVPTALFQSVNAIAVMAAGVVLAWLSSPKES
                     ARSVLRVWLKFAVGLILMGGGFMLLALNAHQARLDGQASMGMMIAGLALMGFAELFID
                     PVAMAQITRLNLPGVTGVLTGIYMLATGAIANWLAGVVAQQTTESQISDTAVAAYGHF
                     FSQMSEWTLSCVALIVAIVGLRWICTRTTSALPQGD"
     gene            complement(24981..25319)
                     /gene="glnB"
                     /locus_tag="MOX77_001498"
     CDS             complement(24981..25319)
                     /gene="glnB"
                     /locus_tag="MOX77_001498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017373484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen regulatory protein P-II"
                     /protein_id="HCA3357070.1"
                     /translation="MKKIDAIIKPFKLDDVREALAEVGITGMTVTEVKGFGRQKGHTE
                     LYRGAEYMVDFLPKVKIEIVVPDDIVDTCVDTIIRTAQTGKIGDGKIFVFDVARVIRI
                     RTGEEDDAAI"
     gene            complement(25396..26733)
                     /gene="glrR"
                     /locus_tag="MOX77_001499"
     CDS             complement(25396..26733)
                     /gene="glrR"
                     /locus_tag="MOX77_001499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator GlrR"
                     /protein_id="HCA3357071.1"
                     /translation="MISRKPAHLLLVDDDPGLLKLLGMRLTSEGYSVVTAESGQEGLR
                     VLHREKVDLVISDLRMDEMDGMQLFTEIQKVQPGMPVIILTAHGSIPDAVAATQKGVF
                     SFLTKPIDRDALYKAIDEALEQSAPATDDSWRNAIVTRSPLMLRLLEQARMVAQSDVS
                     VLINGQSGTGKEIFAQAIHNASPRNNKPFVAINCGALPEQLLESELFGHARGAFTGAV
                     SNREGLFQAAEGGTLFLDEIGDMPAPLQVKLLRVLQERKVRPLGSNRDIDIDVRIISA
                     THRDLPKAMARGEFREDLYYRLNVVSLKIPALAERTEDIPLLANHLLRQSAQRHKPFV
                     RAFSTDAMKRLMTASWPGNVRQLVNVIEQCVALTSSPVISDALVEQALEGENTALPTF
                     AEARNQFELNYLRKLLQITKGNVTHAARMAGRNRTEFYKLLSRHELDANDFKE"
     gene            complement(26730..27494)
                     /gene="qseG"
                     /locus_tag="MOX77_001500"
     CDS             complement(26730..27494)
                     /gene="qseG"
                     /locus_tag="MOX77_001500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system QseEF-associated
                     lipoprotein QseG"
                     /protein_id="HCA3357072.1"
                     /translation="MNLSLVRMSHVFVQTIKRCLLRWGIPVGISCLALTACVPHASQQ
                     LPGSAAQDTLPHYQLADYLPTACADIWSLRGQAVETNPLYWLRTIDCADRLMPVQSRA
                     EARALTDDNWQNAFRRGILLADAKITPPERRAIVTRLEALSAQIPAQVRPVYQIWHDG
                     QALQLALSAERQRYSKLQQTSDSELDALRQQQQALQTQLDLTTRKLESLTDIERQLST
                     RKPAGNYNADTPHTNDKPATSEDGAAPSPSQDEVTP"
     gene            complement(27496..28926)
                     /gene="qseE"
                     /locus_tag="MOX77_001501"
     CDS             complement(27496..28926)
                     /gene="qseE"
                     /locus_tag="MOX77_001501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001676035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two component system sensor histidine kinase
                     QseE/GlrK"
                     /protein_id="HCA3357073.1"
                     /translation="MKRWSVFPRSLRQLVMLAFLLILLPLLVLAWQAWQSLNALSDQA
                     AVTNRSTLIDARRSEAMTNVALEMERSYRQYCVLDDPTLAKVYQSQRKRYSDMLDAHA
                     GVLPDDKLYQALRQDLNALAQLQCKDSGPEAAAAARLEAFANANTEMVQATRTVVYSR
                     GQQLQQEIAERGQFFGWQALVLFLVSLAMVLLFTRMIIGPVKGIERMINRLGEGRSLG
                     NTVTFTGPRELRSVGQRIIWLSERLAWLESQRHQFLRHLSHELKTPLASMREGTELLA
                     DQVVGPLTPEQKEVVDILDDSSRNLQKLIEQLLDYNRKLVDSATELEAVDIAPLVDMV
                     VSAHSLPARAKMMHTDVDLEAERCIAEPMLLMSVLDNLYSNAVHYGAESGNICIRSRS
                     QGSTVYIDVVNSGEPIPQTEREMIFEPFFQGSHQRKGAVKGSGLGLSIARDCIRRMQG
                     EIQLVDDKAQEVCFRISLPLPASDKH"
     gene            complement(29576..>30710)
                     /locus_tag="MOX77_001502"
     CDS             complement(29576..>30710)
                     /locus_tag="MOX77_001502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurQ"
                     /protein_id="HCA3357074.1"
                     /translation="ALFNEELGGVIQVRAEDRDAVETLLAQYGLADCVHYLGQALAGD
                     RFVITANDRTVFSESRTTLRVWWAETTWQMQRLRDNPQCADQEHEAKANDADPGLNVK
                     LSFDINEDIAAPYIATGARPKVAVLREQGVNSHVEMAAAFHRAGFDAIDVHMSDLLGG
                     RIGLGNFHALVACGGFSYGDVLGAGEGWAKSILFNHRVRDEFETFFHRPQTLALGVCN
                     GCQMMSNLRELIPGSELWPRFVRNHSDRFEARFSLVEVTQSPSLLLQGMVGSQMPIAV
                     SHGEGRVEVRDDAHLAALESKGLVALRYVDNFGKVTETYPANPNGSPNGITAVTTENG
                     RVTIMMPHPERVFRTVANSWHPENWGEDSPWMRIFRNARKQLG"
BASE COUNT         7097 a         8600 c         7872 g         7141 t
ORIGIN      
        1 acatggatag acatcgcggt ctgactgtct ttgaaggtgg tgaaatcctg cgcgcgcgcc
       61 accgggatag tggtgttgcg cggaatgact ttttccacca ggccacccat cgtttccagc
      121 ccaagagaga gtggaatcac gtccagcagc agcatttcgc tgtccggctt gttgccgacc
      181 agaatatcgg cctgaatcgc tgcgccgata gcgatcactt tatccgggtc gatagcggtt
      241 aacggcgtgc ggccaaaaaa ttcgcccacc cgctcacgca ccagcggtac acgggtcgaa
      301 ccgccgacca tgaccacttc cagaacgtcc tggggctcaa cgccggcatc tttcaatgcg
      361 cgacggcagg ccaatagcgt gcgcttaacc agcgcggaaa tgagatcgtt aaactgctcg
      421 cgagtgatct ccccctgcca gcccgcaacg ttaacgcgaa cagtatcggc atcgcttaag
      481 gcgattttcg cggtaatcgc ggcatccagc agttcgcgct gaacgcgatt gtcgctacga
      541 tcggcaattc ccgcctgctc gcgaatatag tccgccagca gatggtcaaa gtcgtcgccg
      601 ccgagcgcag aatcaccgcc cgtcgccagc acttcaaaca ccccgcggct caggcgtaag
      661 atagagatat cgaaggtacc gccgccgaga tcgtaaacag cgataacgcc ttctttgcct
      721 gagtccagac cgtaggcaat cgccgccgcc gtcggttcgt tgagcaggcg cagtacatgc
      781 aggcctgcca gccgcgcggc gtctttcgtt ccctgacgtt gggcatcatc gaaataggcg
      841 ggaacggtaa tcaccacgcc atccagctcg ccggagagcg attcgctagc ccgcgcggcc
      901 agcgctttga gaatatcagc agatacgcgt accggattga gcaatccagc cgccgtgtca
      961 atcatcggca gcccattaac gcttgcctta aaccggtaag gcagatgcgg atagcgcgcc
     1021 tggatatccg ccagcgagcg tcccatcatg cgtttcacag agctgatagt gttggccgta
     1081 tcctgcgcgg cattgtcacg cgcagcgtaa ccgaccgtat ggccctgctg ctgatagtga
     1141 accactgaag gcaacaggtg gcgcccttcg tggtcaggca gtgtttccgc ctggccgctg
     1201 cgaaccgtcg caaccagaga gttggtagtg cctaagtcga tgcccgccgc cagacgacgc
     1261 tgatgcggcg cggcgctcag accaggctca ctaatttgta ataaggccat gttagattcc
     1321 agttaaaaat cgagcagctt ttcttcgagt tgttctgcgc tgcttcgcag tttatcgaga
     1381 aaccgcagtt tgcgcaccgt atccgccgcc gcgtcccacg cggcgttgtc caactgttcc
     1441 accatttgct gaagacgagc atcaaacatc ttttgtacgc gtttgatgaa gctttccagc
     1501 cgcgcgtcgt cttttgattg ttcgatatcg tccagctctt cgcgaagcgt gagttgttcc
     1561 atcagaaacg cggtgtcgcg taccgtatgc tgctcgctgg ccagatcgaa cccgtgtaag
     1621 gaaagcagat actccgcgcg cgtcaaaggg tgacgcagcg tttgccaggc ctggttgatc
     1681 gtggcggatt gctggacggc ggcaagctgc tgcgcctgag tgccgttggc aaatttgtca
     1741 gggtgatact ggcgttgcag atcctgaaaa cgaaagctca gcgcctgggt gtcaatctga
     1801 taacgggctg gtaagccaaa gagggtgaag taatccataa cattctcagg gatagcctgt
     1861 cagaacaaac cccacacgca ggcgaccacg gtggggttat accttcttac ttcgcgccgc
     1921 agatgcgttg tctgcgcggg ttcccccagt cacttactta agtaagcgcc tggggattca
     1981 ctcgcttgcc gcttttctgc agcacgaatg actcggtata acagcggaac acagttacac
     2041 gtggaagctt tcgccgcaac cacactcatc tttcacattc gggttggaga atttaaaccc
     2101 ttcgttcagg ccttctttta cgaagtccag ctgtgtaccg tccagaaatt gcaggctctt
     2161 gccgtcaacc actaccttaa cgcctttgtc ttcaaacacg gtgtcttccg ccgtcggctc
     2221 gtcaacaaat tccagtacat aagccatacc tgagcagccg gaggttctca cgcccagacg
     2281 cagaccaaac cctttaccac ggttggccag gaaggtatta actcgcgctg ctgcactgtc
     2341 gctaagtgta atcgacataa caaaacctca atgttaacgt tctattttat ttcgcttcgc
     2401 gtttgctttt gtaatccgca atagcggctt taatcgcgtc ttccgccaga atagagcagt
     2461 gaattttcac cggcggcagc tccagttcgt ctgcaatgtc ggtgttttta atcgcctgcg
     2521 cttcgtccag ggatttccct ttcacccact ccgttaccag agaactggag gcgatagcgg
     2581 aaccgcagcc gtaagtcttg aagcgcgcgt cttcaatgat accttcatcg ttaactttaa
     2641 tctgcaactt catgacgtcg ccgcaggccg gcgcgccaac cataccgctt cccacgttat
     2701 cgtcgttgtt gtcaaacgac cctacgttac gcgggttctc atagtgatcg attacttttt
     2761 cgctgtaagc cattataaat tctcctgatt ccgataccga ttaatgatgt gcccattcga
     2821 tgctgttcag atccacaccc tgcttgtaca tttcccacag tggagaaagg tcacgcagac
     2881 ggccaatgga tttacgaacc agatcaatgg tgtagtcgat ctcttcttca gtggtaaaac
     2941 gacctaaaga gaaacggata gagctatgcg ccagctcgtc attcatgccc aacgcgcgca
     3001 gcacgtagga cggttccaga gtggcggagg tgcaggcgga accggaagag accgccaggt
     3061 ctttcagcgc catgatcagc gactcgcctt caacgtagtt aaagctcacg ttgagaatgt
     3121 ttggcgcgcc ctgctcaagg tcgccgttca ggtaaacttc ttcaatatct ttgatgccgt
     3181 tccacagacg gttacgcaga ccgcgcagac gggccatttc ggtctccatc tcttctttcg
     3241 cgatacggta agcttcgccc atgccgacga tctggtgaac aggcagagta ccagagcgca
     3301 taccgcgctc gtgcccgccg ccatgcatct gcgcttcaat gcgaatacgc ggcttacgac
     3361 gcacatacag cgcgccaatg cctttcggac cataaatttt atgaccggag aaggacatca
     3421 gatccacttt cagttggctc aggtcgatag gcagtttgcc cacgctctgg gtggcgtcaa
     3481 cgtggtagat gataccgcgc gcgcggcaca tttcgccgat ggtcgcgata tcctgcacca
     3541 cgccgatttc gttgttcacg tgcatgatgg aaaccagaat ggtgtcgtca cgcatcgctg
     3601 cttcgagctc gttgagatcg atgatgccgt tgcgctgcgg cgccaggtag gtcacttcaa
     3661 acccttcgcg ctcaagctga cggcaggtgt ccagcaccgc tttgtgctcg gtcttgctgg
     3721 tgatgatgtg cttgcctttt ttctgataaa agttggcagc gcctttgatc gccaggttat
     3781 cggactccgt cgcccctgag gtaaagacga tttcacgcgg gtcggcgccg accagttcag
     3841 caatctggtt gcgggcgata tcgacggctt cttcagcctg ccagccgaaa cggtgtgaac
     3901 gagacgccgg gttcccaaag gttccgtcca gggtcagaaa ctgcatcatt ttctcggcaa
     3961 cacgcgggtc caccggcgtg gttgcggagt agtcgagata aatcggtaat ttcattgctc
     4021 ttaaactccg tacatcactc aatgcaagga atcaggcaac cggctggatg tacgaccgtg
     4081 ttgacgggac gtccgcgtcc cggcctgatt ctgaattctt ttttacgctt catccttcag
     4141 acgaccgcgg cattcaccgc atgaggccgc cagaagagat ggcgtaatat tttaattaag
     4201 cgcgtaattt aacgtcgata gcgtcctgcg cacgaccgct ggcgcgcggc gcgtcatgcg
     4261 tgtgctggcg accagacaca tccagaactt cctggttatt cactagctcg cctaaagtaa
     4321 tattgttgag aaaaccggtc agacgatcgc ttaaatcacg ccacagcgca tgggtcaggc
     4381 atttatcgcc gccctggcag ccgcctttgc cctggcaacg ggtcgcgtca acggattcat
     4441 caaccgcgct gatcacttcg ccgaccgcga tactgccagc atctttaccc agcagataac
     4501 cgccgcccgg cccgcgtacg ctggaaacca gaccgttttt acgtaaacgg gaaaatagct
     4561 gttccagata agaaagggaa atcccctgac gttcagaaat atcagccaac ggtaccgggc
     4621 ccgcttcgga gttgagcgca acgtctaaca ttgcggtcac ggcataacgc cctttagatg
     4681 tcagtctcat gtcttactta acctcaaact cgcccctgcc cggggttttt tattgtaaaa
     4741 tgggggtatt gcatagcagg gacaagtctg acattcccga gtaaattggt caactattta
     4801 cttgagtaaa ttagtcaggt atttagcgtt ccgtgcggta ttgatgtgcc ggatggcgct
     4861 tcgcttatcc ggcctacagg ccgcacgatt tgtaggtcgg ataagcgaag agccatccgg
     4921 cattaacgcg gttacttgcc tttattctgc tgctcaatag acgccagaat cccacgcaga
     4981 atattcaact cctggctttc cgggcgggcg cgggtaaaca gacggcgcaa tttattcatc
     5041 acctgccccg gatggttttc gcgaataaag ccagtggaga gcaacgtctg ctccagatgg
     5101 ccgtaaaaac gttcaagatc gtccaccagc ggatacggtg tctcttcatg atctgccgcg
     5161 tcgccgtttt cctgcgtcgc cagccaggcc atgcggactt catacgcgat gacctgtacc
     5221 gccatcgcca gattcaacga gctgtactcc gggttagcgg caatcgcgac gtgataatgg
     5281 catttttgca actcatcgtt agtcagcccg acacgctcac gaccaaaaac cagcgcaacc
     5341 ggcgtatttg ccgcttccgc tacgcttttt aagccgcact cgcgcggatc aagcatcggc
     5401 cacggcagag tgcgggagcg ggcgctggtg ccgaccacca ggctacagcc agccaacgct
     5461 tcgtccagcg tatcgacgat ctgcgcatta ccgatcacat cgctggcgcc tgccgccagg
     5521 gcgatggcct gggagtccgg tttcaccagc gggtttacca gccacaggtt agttaagccc
     5581 atggttttca tagcgcgagc cacagagccc atattgccgg tgtgggaggt ttccaccagc
     5641 acaattcgaa tgttttgcag cattgtcttt cttcagctaa agattattcg gacatcttac
     5701 cataaaacca agacagattc cgatctcgct gctatactct gcgccgtttt cccgttcttt
     5761 aacatccagt gagagagacc gatgcatccg atgctgacca tcgccgtgcg cgcagcgcgc
     5821 aaggcgggta atgtaattgc caaaaactat gaaactccgg acgctgcaga agcgagccaa
     5881 aaaggcagta acgattttgt gaccaacgta gataaggccg ctgaagcggt aattatcgac
     5941 accattcgca aatcttaccc gcaacacact attatcaccg aagaaagcgg tgagcacgtt
     6001 ggcacagatc aggatgttca atgggttatc gatccgctgg atggcaccac caacttcatc
     6061 aaacgtctgc cacacttctc tgtttccatt gctgtacaca ttaaaggccg tactgaagtg
     6121 gctgtcgttt acgatccgat gcgtaacgaa ctgttcaccg ccacccgcgg tcagggcgcg
     6181 cagctgaacg gctaccgtct gcgcggcagt accgcgcgcg atctggacgg cactatcctc
     6241 gctaccggct tcccgttcaa agccaaacaa tacgcgacca cctacattaa tattatcggc
     6301 aagctgttca ccgaatgcgc cgatttccgc cgcaccggtt ccgccgcgct ggatctggcc
     6361 tatgtggctg caggtcgtgt cgatggtttc tttgaaattg gccttcgtcc gtgggatttc
     6421 gccgcgggcg aactgctggt tcgtgaagcg ggcggtatcg tcagcgattt caccggcggt
     6481 cataactaca tgatgaccgg taatatcgtg gcggggaatc cgcgcgtcgt taaagccatg
     6541 ctggcgaata tgcgcgacga actgagcgat gcgctgaagc gctaagtctc ttcggcggat
     6601 ggggccactc atccgccgtg ccttttcagg cgtttttcct aaacaccacc tcatcgcttt
     6661 acttgcctgc atgtttttgt acgatcgctc cctgctccgc tatggacata aagcggcaag
     6721 gaagcgaaca tgacccttca acatacccga cgcatcgtca aatccctttt tattctgttt
     6781 atcattgtag tctgtattta cctgctaccc cgcgtagcga tcaatgcctt ttattacccg
     6841 gacaataaag tctatggacc aacccctgcc gaagctgaat ccattacctt taccgccaaa
     6901 gatggcacgc atctgcacgg ctggtttatt cctactgctt tcggcaggcc ggaaaacgcc
     6961 gtcgcgacgg tgattcatgt ccatggcaac gccggaaata tgtcggcgca ctggccgtta
     7021 gtcagttggc tgccagaacg caacgtaaac ctgtttatgt ttgattaccg tgggtttggc
     7081 gaatctgagg gcaccccatc acaagagggg ctactgaacg atacgaaaag cgcgatagat
     7141 tatgtgcggc atcgtgccga cgttaacccc gagcgcctgg tactgctggg gcagagcctg
     7201 ggcggcaata atgtactggc cgccgtaggc cactgcgtag gctgcgcaaa tatgcgctac
     7261 gccgaccagg cgggcatacg tgcgattgtc ctcgactcaa cgttttcatc ctattcctcc
     7321 atcgccaacc agatgatccc gggcagcggc tatttgcttg atgaccgcta tagcgcggat
     7381 cgcaatatcg ccagcgtcag ccccattccg gtattgattc ttcatggcac ggcagaccat
     7441 gttattccct ggcaggacag tgagaaattg tatgccctcg cccgggagcc caaacaaaaa
     7501 atcttcattc ctgacggcga tcacattgat gctttttccg gacgttatgc aaacctttac
     7561 cgcgatgcga tgattaattt tattcagaca gcgctatccg ctaaatagcg cgacgctgta
     7621 tatatgcata ttttatgatt aagaatatat ttattatacc gatagtaaaa accatttttt
     7681 cccgttagcg aaggcggcgg attagcgcta gcgtaacagt aatattcatc tgatttttat
     7741 aacaatttat tttcatttgt ttttcctgaa tattactgtg gagtatgtga tggctatcaa
     7801 aattacgcct gacgagttta gtctgcttat ccagcgatta aacaaaaaat ggcgcgtgtt
     7861 tgccccgtcc gcagagtttc gcggcgggcg tttttccgac actgacaaca ttatttatca
     7921 acggattagc ggctggcgcg atctcatctg gcacgagaaa tcgcacatgt cgccgaatac
     7981 cattatcgcc cctatcaccg aaacgctctt ttatttcgat aaaaacacca ttcaaattgc
     8041 cgagacagac acctccccga taatcatctt tgcccgcgcc tgcgacatta acgccatgtc
     8101 gcggctggat tatatgtatt tatcaaatgg gaataattcc gattacagtt atcaactgct
     8161 acgggagcat attcgtttcg tccttattga gtgtgaagaa agcttcgaaa attgtttctg
     8221 cgtctcaatg ggtactaata aaactgactg ttatagcgcc gccatgcgtt ttagcgatga
     8281 gggcgcgctt gtgagcatcc gcgatccctt tatcgaggcg gcgatacaag gactggggca
     8341 ggaggctgac tataccccct ctttcgtcag cgaaaaccgg gaaaccgtcg tcacgccgga
     8401 cagcgtttgc cgcgatccgc aaaaaattcg cgacattctc actcgccatc cgctatggga
     8461 cgcctacgac agccgctgca tcagttgtgg ccgctgtact accgggtgcc caacctgtac
     8521 ctgctatagc gtctttgacg tcgcctatga tgaaaatccg cagcgcggcg aacgccgtcg
     8581 ccagtgggca agctgcatgg tgccgggctt tagcgacatg gccggcggtc atggttttcg
     8641 cgaaaaaccc ggcgagcgtc tgcgctaccg cgccctgcat aaggtcaatg actacaaagc
     8701 gcgcaacggc attgaacata tgtgcgtcgg ctgcggccgc tgcgacgatc gctgcccgca
     8761 atacatcaaa ttttctttga ttattaacaa aatgaccgct gccgttcggc aggcgctggc
     8821 agaggaggca taacgcatgt cacattgttc ctgtcatgat aaaccgcagc acagtttgct
     8881 gcctgcggcg taccgcatcc tcagtattac tcgccacacg ccgctggagt ggaatttccg
     8941 cgtggccgtc gattttcccg cgcactgggg gcaatttgtt gaggtgtcgc tgccgcgcgt
     9001 cggcgaagcg cccatctccg tttccgacta cggcgatggc tggatagatc tgctgattcg
     9061 taatgtcgga aaagtgacca gcgccctctt tacgctgaaa gaaggcgaca acgtgtggct
     9121 acgcggctgc tatggcaatg gctatccggt cgatactctg cgccataaac ccttactggt
     9181 tgtcgcaggc ggcacgggcg tcgcgccggt gaaaggctta atgcgctatt tcgttgagaa
     9241 tccccaggaa attggtcaac tggatatgat tctcggctat aaaaatcgcg attgcgtgct
     9301 gtacaaagaa gaaatggcga cgtggcacgg caaacataat ctggtgctca cgctggatga
     9361 aggcgaggct gatgaccgtt accagattgg tcgggtgacc gatcggcttg ccgacatgac
     9421 gcttagcgat atcgacacca tgcaggccat cgtcgttggg ccgccaataa tgattacctt
     9481 taccgtaaaa atgctgctgc aaaaagggct caagccggag caaatttggg tggactacga
     9541 acgccggatg gcctgctccg tcgggaagtg cggccactgc cgtatgggcg aagtgtatgt
     9601 ctgcaccgac ggcccgatat ttaactacgc cgtcgcgcaa cgttttgccg attaaggaga
     9661 acatcatgag cattgatatt gatatcatta aagcccgtgc gaaaaacgaa tatcgcctat
     9721 caaaagtgcg cggcgaagcc atgatcagcg tccgcattcc cggcggtatt ttgcccgcgc
     9781 atttgctaac ggtggcgcgt gacatcgccg aaacctgggg caacggacaa attcacctca
     9841 ctacccgcca gaagctggcg atgccgggta tccgttacga agatatcgac aacgtgaacg
     9901 ctgcgctgga gccatttctt cgcgagattg aaatagaact gtgcgacgtc caggttgagg
     9961 ataccaaagc gggctatctc gctattggcg ggcgaaatat tgtcgcctgt caggggaacc
    10021 gcatttgcca gaaagccaac actgacacga ccggtctgtc ccgtcgtctt gaaaaactgg
    10081 tctatcccag cccttatcat ctcaaaacgg tcattgttgg ctgcccgaat gattgcgcga
    10141 aggcgtcaat ggccgatctg ggaattattg gcgtggcgaa aatgcgcttc actgccgatc
    10201 gctgtatcgg ttgcggcgcc tgcgtgaagg cctgtagtca ccacgcggta ggctgcctgg
    10261 cgctgaagaa cggcaaagcg gtcaaagaag agtccgcctg tatcggctgc ggcgagtgcg
    10321 tgctggcctg tccgacgctg gcctggcaac gtaagccgga tcagctctgg caagtccgtc
    10381 tgggcggacg caccagtaaa aagacgccgc gcgtcggcaa gctcttcctc aactgggtga
    10441 ctgaagatgt gataaagcag gtgatcgtta acctgtatga atttgaaaaa gagatgctcg
    10501 gcggaaaacc gatctatcta catatgggcc atctgatcga caaaggcggc tatctgcgtt
    10561 ttaaagaacg ggtactgcgc ggcgttcagc tcaatccgga agcgatggtc gccgaacgca
    10621 tttactgggc cgaagacgaa tccgtcgcgc ggatgcatct caaacccgcc gggcactagt
    10681 caaccacgcc atggccgcag cccgcccaca ggctgcggca cgctaaacca catgaccagc
    10741 gccgcgacaa gcagtatgac ccctccggcc agcgccagcg ttgaccagcc tacctgccgc
    10801 cataacgccg gcgctttgtt tccactgagc ttcaccgcca gagcacgaaa agtgtgtacc
    10861 agcagcgcca gcgaagtaat cgttagcgag gttcccgccg ccattgccag taccgacgcc
    10921 attccccagc taaaaacgcc aatcacttta ctgaataaca gcaccattat cgctccggaa
    10981 cagggccgca tccccataga cagtacgatc atgagtcgcg cgcgccagtc atcgccgcta
    11041 tgcaattgtt cctgcgtcgg tagatgctga tgtccgcagc cgcatttttc atggtgaaca
    11101 tggcgcggcg taaaagcgat aaagacaggt ttacgtagca gcgcgcgtaa cctttttatg
    11161 gcccgccagc acagcaagat gcccagcccg ccaactaacg catagctccc cttttccagc
    11221 cagaaaccgc tcagatggag ctgcctggcc ggaagttgca atacggtcag cacgcccacc
    11281 accaacccga tagccacgac cccctgcaat aacgcggcgg cgagggttaa cacgatactt
    11341 gatttcagct tcgaaggatg cgtcgccagc catgtcgcga tcaccacttt gccgtgtccc
    11401 ggccccacgc atgaagcacg ccatacataa aactcagcag aagcaacgat ccgcccgccc
    11461 gctcaggatg cgtcgccacc gcattaagca gcgcgctcaa ctgctgattc acgtcccgct
    11521 gccaaagagc gcttttcagc atcacctgcg gccaggcctg ccatatccac agaccgccaa
    11581 ccagcatcag cagcaggaat aacgccaatg gccacagcga gagccagcgt cgccccggag
    11641 tgcgttgaga aaaaattact gacattgcaa ggtcaccgtt tgggcaaact gtttacctaa
    11701 atccatatcc tccggcggcg cgtcctcttt atccagcgac tgggcgaaac gtagcgtctc
    11761 ttcgccgggc gcaggagtat aaacctgaat ccgacacttt tcgcgcagcg gttccggcat
    11821 cgtgatatcg ctgtcctggt cataatgcat atcgacataa taagagggat caaacgttga
    11881 aaaggtataa gtctggccgc ttaacggctg cggttcagcc agcggcagcg taaaggtcaa
    11941 taccgcctga tgcgcgtcac gcgtcatacc gtattctgtc ggcctgtttt taaacttcac
    12001 tttcgcgcca ttgcgccaca cttctgtaaa gtagtgctgc ccaagtacgt tagccatcac
    12061 ttccgccgcc aactttttcc atatttctga acccggcgcc gcgtttccgg cgtcatacag
    12121 cagatcggcg gacgtcagcg cgtccattgt ccagcgcatt tttaacgcca caaattgctc
    12181 attttcactg accacctgcg tttgcagacg gatgaagctg tgcggatgcg ccgccgccac
    12241 gaaagataaa acggcgagaa atagtattaa ggcgctgcgt ttcactggct tcatctgttc
    12301 ctcgcgataa aaattctgtg acactcctca gcattcctgg cctaaaagca cacttatcac
    12361 atttttcaca tgcaaacttt agctatcctt accagataaa ctaacgggag acctgacaga
    12421 tgatgccgac aattgcccca ccatctgtac tttccgctcc ccagcgccgc tgtcaggtat
    12481 tgctgacgct tttccagccg gagccaattg ccacggtgga aatcttcagc gcgcttaatg
    12541 gcgttgatga tgatactgcc cgtgaggata tcactgacac aagcctggag atccagcgct
    12601 atcatcgcct tgccatcaca acatgccaga acggttgcta tcggatcgaa ggtacagcac
    12661 tcgatcagcg cctttgcctt ttacactggc tcaggcgcgg cctgcgttta tgcccgacct
    12721 tcgtcacgca acagtttacc ccggccttaa aaaacgcgct aaagcagcgc ggtatcgcgc
    12781 gtccgctgta tgacgatatt aatctgcacg cgctcatcaa tctgtgcgcc cgccggttgc
    12841 aaaaaccatt tgaacatcgc gacgtgcagt tcctgcgtct ctttttacag tattgtctgc
    12901 tacaacacca tgccggcatc accccggaat tcaatcctgt acagcagatt tgggcgcagt
    12961 cgtgtgcgga atatccactc gcccaggaaa ttggtcgtca ctggcagcgc cacgtgatgc
    13021 aggccgcacc gctcaatgaa gcgctgttta tggcgttact gttttcaatg attcgcctcc
    13081 ccgacccgat tcgcgacacg catcaacggg cgcagcaact gcgactggag gtggcgcggc
    13141 tggtgctgcg ctttcgagaa aaagggaacg tacgcttcag cgacgaacaa gggcttaacg
    13201 atcagctgta tgtccatctc gcccaggcgc tgaaccgaag tttattcacg attggcatcg
    13261 ataatacgct tccggaagag ttcaaccgtc tttatccgcg tctggttcgc accacacgtg
    13321 aggcgctcgc cgggtttgaa gccgaatatg gtatccactt ttccgaggaa gagacggggc
    13381 tggtggcagt gattttcggc gcctggctga tgcaggataa cgatttgcat gagagacaga
    13441 tcgtattgtt agcggataaa aatgatgcgc tggagacgca tattgagcag caactgcgtg
    13501 aactgaccct attgccgctg aatatcagac ggatatcgct ccaggcgttt caaaaagagg
    13561 gatgcccgcg cggcgtagcg ctgattgtta ccccttacgc cacgccgcta ccgctcttct
    13621 caccgccatt aattcatgcg gatcgcgccc tcacagagca ccaacagcag cagatccgca
    13681 agatcctgga atcatgacgc ggcaaccact ttgggccgaa ggaagatagc gggcaatgcc
    13741 accagcgcca taatccagaa tacgccgccg cccagatgtt gatacagaaa accggcaaat
    13801 accgtcataa tcgcgatact gccgcccatc gccacagcgg aatagacggc ctgcaaacga
    13861 atcacctcgc ttccctgacg cgcagcgata tagcgcatag cggccagatg gcaaacggta
    13921 aacgtgccac agtgcaggat ttgtatcaca atcagccacg gcaacgccgt actccagccc
    13981 atcagtcccc agcgtaccac gccgcacaca gcagaaagca acagcaagtc gcgggcgcta
    14041 aaccggcgga atagcttttt actcagggca aaaatgatca cttccgccac cacgcccaac
    14101 gaccataaat agccgaccgc cgatgctgaa tagccagccc cctgccagta gatggcgcta
    14161 aaaccgtagt aggcggcgtg cgccccttgc agcaaacaga cgcaggcgag aaaacgccaa
    14221 ctttgtgcca ccagcgtacg ccaggcgggc cagcctgcgc tctcctgctg acggctttcc
    14281 ccttgcggcg gcacgctggg acgtaacaac atacccagca acatcgaggc gacgccgagc
    14341 gtcagtagcg ccagaatcgc ctggtaatcg tataaactca ccagcttacc ggtcagcgcc
    14401 gaccctatca cgaaggcgat ggacccccac agccgcaccc gaccatagtc cagggtaatt
    14461 tgcttttgcc aggtattggc cagcgcatcg gtcagcggca ccagtggtga aaagaagagg
    14521 ttaaacccaa ccatcaccac cattagccac gcgacatgcg ttcctgccca aaatgccagc
    14581 gcaaatacca gcgtcagcaa tgccaggacg cgcagcgcgg agatcaaccg cgaaggatcg
    14641 cttacgcgag gcgcaatgag cagactaccg agaaaacgcg cgaccagacc cacgcccagc
    14701 agaagaccga tggtttccgg cgttagccca agacctttga gccagacgct ccagaagggc
    14761 agaaaaatac cgtaactaaa gaagtaggtg aaataactga gcgccagcca gcgcgtggaa
    14821 tgcaatgcca tgattccctc ccgtttggag gcgatagtct ggcggtaaac ggttgcgctg
    14881 gcaagggtaa caggcggagg gagaagttca aacggcaacg ccgccggata atgacttccg
    14941 gcggcgtcac gttatggcgc ataagtaatg cccgacagac gcagcgccat cgggccattt
    15001 acacaacaca aacgcttacg cgtaaaccgg gaagcgggcg cagatatcca gcactttcgc
    15061 tttcacgcgt tcaatggtgg cttcatcatt gatgttgtcc agcacgtcac acatccagcc
    15121 agccagctct ttcacttccg cttctttgaa gccgcgacga gtaaccgccg gagaaccaat
    15181 acggataccg gaggtcacga acgggctctt cggatcgttc ggcacgctgt ttttgttcac
    15241 ggtgatgtta gcacggccca gcgcggcgtc agcttcttta ccggtcaggt ttttatccac
    15301 caggtccagc aggaacaggt ggttctcagt gccgccagac accactttgt agccgcggtt
    15361 caggaacact tccaccatcg ctttggcgtt tttcgccacc tgctgctggt aaactttgaa
    15421 ctccggctcc atcgcttctt tcagcgctac cgctttaccc gcgatcacgt gcatcagcgg
    15481 gccgccctgc gcgcttggga agacggcgga gttcagtttt ttgtacagct cttcgtcgcc
    15541 gcctttcgcc aggatcaggc cgccgcgcgg acccgccagg gttttgtggg tggtggtggt
    15601 gacaacgtga gcgtgcggaa ccgggttcgg gtaaacgcct gcggcaatca ggcccgccac
    15661 gtgcgccatg tcgacaaaca ggtatgcgcc gatgctgtca gcgatttcac gcatttttgc
    15721 ccagtcaacc acaccggagt aggcagagaa gccaccgata atcatcttcg gcttgtgctc
    15781 tttggccagc ttcgccatct cgtcatagtc aattttaccg gactcatcga taccgtaagg
    15841 tacgatgttg tacagtttac cggagaagtt aaccggggag ccgtgagtca ggtggccgcc
    15901 ctgcgccagg ttcataccca gaacggtatc gcccggctgc agcagcgcgg tgtaaacagc
    15961 gaagttagcc tgagaaccgg agtgcggctg cacgttagcg tagtcggcgc cgaacagttc
    16021 tttcgcgcgg tcgatagcca gctgctctac gacatcaacg tattcgcaac cgccgtagta
    16081 gcgcttgccc ggatatcctt cagcgtattt gttggtcagc tgagacccct gcgcctgcat
    16141 cacgcgcggg ctggtgtagt tttcggaggc gatcagttcg atgtgctctt cctgacgtac
    16201 tttttcctgc tccatagcct gccacaattc ggcatcataa tcggcaatgt tcatttcacg
    16261 ctttaacatc cgcatctcct gactcagcta acaataaaat ttgtgcctga aaaggcagtc
    16321 cgtgggactt cggccaacag tataaccgaa tcattcttcg ataacaggtc ttgacaaagg
    16381 tttttacgca aacgattacc tatgcgtcag ataagggttt cctgaacgag agcctgacga
    16441 atttcaacgg atttcttttc agctttgtga tgcagatttt tcacgttgtt acctccataa
    16501 cgtaaagcag agaagatcca tttacaatgc aagggtattt ttataagatg catttgatat
    16561 acattattag attttcacat aaaggaagca cgtatgcttg acgcacaaac catcgctaca
    16621 gtaaaggcca ccattcccct gctggttgaa acaggaccga aactgaccgc ccacttctac
    16681 gaccgtatgt ttacgcataa cccggagctc aaagaaatct tcaatatgag caaccagcgt
    16741 aacggtgatc agcgcgaagc cctgtttaat gctatcgcgg cctacgccag caatatcgaa
    16801 aatttaccgg cgttgctgcc ggcggtagaa aaaatcgcgc agaagcacac cagcttccag
    16861 attaagccgg agcagtacaa catcgtcggg acgcatctgc tggcgacgct ggatgaaatg
    16921 ttcaacccgg gccaggaagt gctggacgca tggggtaaag cctatggcgt actggctaac
    16981 gtctttattc atcgggaagc cgagatttat cacgagaacg ccagcaaaga cggcggctgg
    17041 gaaggcacgc gccccttccg catcgttgcg aaaaccccgc gtagcgcact gatcaccagc
    17101 tttgagtttg aaccggtcga cggcggtacg gtggcggaat accgtcccgg gcagtatctg
    17161 ggcgtctggc tgaagccgga aggttttgcg catcaggaga tccgccaata ttcactgacc
    17221 cgtaaacccg atggcaaagg gtaccgtatt gccgtgaagc gtgaagacgg cggccaggta
    17281 tcaaactggt tacaccatca cgccaacgta ggcgatgtgg tgcatctggc tgcgccggca
    17341 ggtgacttct ttatgaatgt cgccgctgat acccccgttt cgctgatttc cgctggcgtc
    17401 ggccagacgc cgatgttggc gatgctcgat acgctggcga aagaacagca taccgcgcag
    17461 gtgaactggt tccacgcggc ggagaacggc gacgtccatg cgtttgccga cgaagtgagc
    17521 gagctgggcc gtacactgcc gcgtttcact gcccatacct ggtaccgcga gccaaccgag
    17581 gccgatcgcg cccaacgcgt ctttgacagc gaagggctga tggatttaag caaactggaa
    17641 gccgcgatca gcgatccggc aatgcagttc tatctttgcg gcccggtagg ctttatgcag
    17701 tttgccgcaa aacaactggt ttcacttggc gtgaataacg aaaacattca ttacgaatgc
    17761 ttcggcccgc ataaagtgct gtaattgcaa gaaatccgct gaaaaaacgg gcgttatcgt
    17821 taaggcgaac gcccgttttc ctccccgttc tcctgcttat tgcgctgctt tttatgcctt
    17881 tcttttacaa aaaaggggaa taaaaaagtc tgtgcaaatc gtgttattat taacgtttga
    17941 cttagctcgt tagggcatct ttttatgcag caacctgttg tacgcattgg agagtggctg
    18001 gttacacctt ctgttaatca gatcagtcgt cagggacgcc agattactct tgaaccacgg
    18061 ctgatcgatc ttctgatgta ttttgcgcat catccggatg aagtgttaag ccgggataac
    18121 attattgatc atgtctggat gcgcaccatc gtgaccaacc atgttgtcac ccaaagcatt
    18181 tctgaactac gcaaatcatt aagagatggc ggagacagca atgctgaata catcgttacc
    18241 gtacctaaac gcggctataa gctgacggcg ccggttatct ggtgcgaaga aaatagcgat
    18301 gagatcgata atttatcaac gtcgccgccg ccgccgatcg cagcgacgaa tgcagaaccg
    18361 acagaggggg ttcctgccgc tgcgcctgtg ccgcccgcct ctttgcaaac gccgactaaa
    18421 aaggcgaaaa agccgcgtat cgccgctttc tggacgtggg tgatgttcct gctctcgctg
    18481 gcgacgctgg tggtgtttat cgtgatgtcg gtggtagatc ataatgccgc ggtaacaaaa
    18541 acgcggttat tacttaaccc acgagatata gatgttcgtt ttgaaggcgg caattcctgt
    18601 aataactggg tctcgcagga gtcctacgcc atcggtctgg gcggcttaat caccgacctg
    18661 ctgaacacct actcgacctt tatggtgcac gataaaacca attaccgggt caatgagcca
    18721 agcaactccg gtaagacgtt aaccattcag tttgtcaatc agcgccacta tcgggcgcag
    18781 cagtgcttta tgtctgtggt gctcattgat aacgccgatg gttcaaccat gctggataag
    18841 cgttatttcg tcaccaatac taaccagttg tccatccagg atgatctgtt taatagcctg
    18901 tctttcgttt taacacagcc ctggcctaat cgtatgcgag aacaactggc cctgttcaga
    18961 acgccgcaaa ataccgcgct gatgcgtttt tatgaggcgc gccagcttat tctgagcggc
    19021 gatgcgcagg cgctaagtaa agccggcgat attctgaatg gcattattaa ggaaacgcct
    19081 gatttcaact atgcctatga atataaagtg ctggtagatg tattacggca atcacaacag
    19141 ccgtttgata aagaacaagt ggctgcgctg aacgaagagt ttaaaaaaat agatcaaatt
    19201 ccgggcgttg agaaaacgtc tgtttattat aaaatcaaga ccgttgatct tttgggcaaa
    19261 ggtgatatcg atgcagcgta tgaggaaatc aataaaagca tcgagcttga aatgtcgtgg
    19321 tttaactatg tcctgttggg gaaagtttac gaaatgaaag gtgagaatcg tctggccgct
    19381 gatgcctatc tgaccgcctt taatttacgt ccaggtgaaa atacgctgta ctggatcgag
    19441 aacggcgtat ttcagacatc cgttcagaaa attgtccctt atctgaatag ttttctggca
    19501 gaagattaaa tttaacgctg aaccatgaca aataaaagcg aaaagatatt aaatttttcg
    19561 cttttatttt gtgaaaaata tgttgcaaaa aatagcttat gttaattttg gcaacatatt
    19621 catcgcaaag aaatgtaaat gtaacccttt gtaattaaac aatatttatc ctttcatgat
    19681 atttatatgt taattcaaaa aaatcaatct atcagttttt tcatgtttgt gtttatttca
    19741 ctttttcttt aggacttatc tcaacccatt cgttaatctt gtcgacagtt gaacgggcac
    19801 gcagcatata tgaagcataa gcccggttct taaaaataca gctcaggaga aatgaacatg
    19861 agttctgtca aaaagatcgg gctatttgcc tgtactggcg tcgttgccgg taatatgatg
    19921 gggagcggga ttgcattatt acccgccaac cttgccagta ttggtggcat tgccatctgg
    19981 ggctgggtaa tttctattat tggggcaatg tcgctggctt atgtttatgc gaggctggca
    20041 accaaaaacc cgcaacaggg tggccctatc gcttatgctg gggaaatatc tccggcgttt
    20101 ggtttccaga ccggcgttct ttattatcac gcaaactgga ttggtaactt agccatcggt
    20161 attaccgcgg tttcttatct ttctacgttc ttcccggcat taaataatcc aataccggca
    20221 ggtattgcct gtattgctat cgtctggctg ttcaccttta ttaatatgct gggcggggcc
    20281 tgggtcagcc gcttgacaac gattggcctg tttctggtgc tgatcccggt agtcttgacc
    20341 gcagtcgccg gctggcattg gttcgctatc gcgacctatc acgcgaactg gaacacgtct
    20401 acgacgaccg actctcacgc cattgttaaa agtattctgc tctgcctgtg ggcgttcgtt
    20461 ggcgttgagt ctgccgccgt cagcaccggc atggtgaaaa acccgaaacg caccgtaccg
    20521 ctggcaacca tgctgggtac cgcgctggca ggcatcatct atatcgccgc gactcaggtt
    20581 atcgccggga tgttcccagc ttccgttatg gcctcttccg gcgcgccgtt cgctatcagt
    20641 acctccacga ttctgggtgg ctgggctgcg ccgctggttt ccgcctttac cgctttcgcc
    20701 tgcctgacgt ctctgggctc ctggatgatg ctggtcggcc aggctggggt tcgcgccgcc
    20761 aacgacggca acttcccgaa aatttacggt gaaatggata aaaacggtat tccgaaaaaa
    20821 ggtctgctgt tggctgcggt gaaaatgacg gcgctgatga ttctgatcac catcatgaac
    20881 tccagcggcg gtaaagcgtc cgacctgttc ggcgaactga ccgggattgc cgtactgctt
    20941 accatgctgc cgtacttcta ctcttgtgtt gacctgattc gtttcgaagg gttcaacatc
    21001 cgtaactcgg taagcctgat ttgttctgta ctgggctgcg cattttgctt catcgcactg
    21061 atgggcgcca gctccttcga actctccggc acctttatcg tcagtctgat catcctgatg
    21121 ttctacggtc gcaaaatgca ccagcgccag aacaacgaca gcgacaacaa tacggctgaa
    21181 gcgctttaac cgctaactcc tttttctcaa agcccctttc gtcacctgct atagcgtagc
    21241 gggaggggcc cactttacca ggaacaagac tatgaacgtt attgctatca tgaaccacat
    21301 gggcgtctac tttaaagaag agcctattcg tgaactgcat cgtgcactgg aaggtttaaa
    21361 tttccgtatc gtctatccaa acgaccgaga agacctgctg aagctgattg aaaataactc
    21421 ccgcctttgc ggcgtcattt tcgactggga taaatataac cttgagcttt gcgaagagat
    21481 tagcaagctg aacgagtata tgccgctgta tgccttcgcc aacagctact ctacgctgga
    21541 cgtcagcctc aacgatctga gaatgcaggt tcgcttcttt gaatatgctt taggcgccgc
    21601 agccgatatc gcggcgaaaa ttcgccagaa taccgatgaa tacatcgaca atattctgcc
    21661 gccgctgaca aaagcactgt tcaaatatgt gcgcgaaggg aaatacactt tctgtacgcc
    21721 tggccacatg ggcggtactg ctttccagaa aagccccgtc ggcagcatct tttatgattt
    21781 cttcggcccg aacacgatga aatccgatat ttcgatttcc gtttccgaac tgggttcgct
    21841 gctggaccac tccggcccgc ataaagaagc ggaagagtat atcgcccgcg tctttaacgc
    21901 cgaacgtagc tacatggtga cgaacggcac ctctacggcg aacaaaatcg tcggtatgta
    21961 ctccgcgccg gcaggcagca cggtactgat tgaccgtaac tgccataaat cgctgaccca
    22021 tctgatgatg atgagcgaca ttacgccgat ttatttccgc ccaacccgta acgcctacgg
    22081 tattcttggc ggtattccgc aaagcgagtt ccagcacgcc actatcgcta aacgggtaaa
    22141 agagacgcct aacgccacct ggccggtcca tgctgttatt actaactcaa cctatgacgg
    22201 tctgttgtat aacactgact acatcaagaa aactctggat gtgaagtcca ttcattttga
    22261 ctccgcctgg gtgccttaca ccaatttctc ccctatttat cagggtaaat gcggtatgag
    22321 cggcgaccgt gtagaaggca aaatcattta tgaaacccag tccacgcata aactgctggc
    22381 ggcgttttca caggcatcca tgattcatgt taaaggcgac attaacgaag aaacctttaa
    22441 cgaagcctac atgatgcata ccaccacttc tccgcactac ggtatcgtag cgtctactga
    22501 aaccgcagcg gcgatgatga aaggtaatgc gggtaaacgc ctgattaacg gctctattga
    22561 acgtgcgatt aaattccgta aagaaattaa acgcctgaaa agcgaatctg acggctggtt
    22621 ctttgacgta tggcagccgg aacatatcga tggagctgag tgctggccgc tgcgttcaga
    22681 tagcgcatgg catggcttca aaaatatcga taacgaacac atgtacctcg acccgatcaa
    22741 agtcactatc ctgacgccgg ggatgaagaa agacggtacg atggatgaat tcggtattcc
    22801 ggcaagtctg gtcgccaaat atctcgatga acgcggcatc atcgtagaaa aaaccggtcc
    22861 atacaacctg ctgttcctgt tcagcattgg tatcgacaaa accaaagctc tgagcctgct
    22921 gcgcgcgctc actgaattta aacgcgcctt tgacctgaac ctgcgcgtca aaaacattct
    22981 gccggcactg tatcgcgaag cgcctgagtt ttatgaaaat atgcgcatcc aggaactggc
    23041 gcagaatatt cataaactgg tcgaacatca taatctgccg gacttaatgt accgtgcgtt
    23101 tgaagtgctg ccgaaaatgg tgatgacgcc gtatactgcg ttccagaaag agctgcatgg
    23161 cgaaacggaa gaggtgtatc ttgaagagat ggttggacgc gtcaacgcca acatgatcct
    23221 tccttaccct ccgggagtgc cgctggtgat gcctggtgaa atgatcaccg aggaaagccg
    23281 tccggtactg gaattcctgc aaatgctgtg cgaaatcggc gctcactatc cgggcttcga
    23341 aaccgatatc cacggcgcct atcgtcaggc tgacggacgt tacaccgtta aggtgctgaa
    23401 agaaaatacg aaataagtac caaagggaag tggcttgcca cttccctttt ttcacgcagc
    23461 aaggagactt tatgaaaaca ccctcacaac cgcgcgcgat tttttacatc gtggcgattc
    23521 aaatttggga atacttcagc ttttacggca tgcgtgcctt actcatcctt tatcttaccc
    23581 accagcttgg ttttaatgac agccacgcga tcaacctctt cagcgcctac gcctctttag
    23641 tttacgttac ccctattctt ggcggctggc ttgccgaccg cctgcttggc aaccgcgtgg
    23701 cggttatcac cggcgcctta ttgatgacgc tgggtcatgt ggtattgggc ttagaatctg
    23761 attcaacgct gagtttatat gcggcgctgg ccattattat ctgcggctac ggcttgttta
    23821 aatccaatat tagctgtctg ctgggcgaac tttacgcccc tgatgacaac cgccgcgacg
    23881 ggggattctc gctgctctac gccgccggga atattggatc gatagccgcg ccgatcgcct
    23941 gtggtctggc ggcgcagtgg tatggctggc atgtcggctt tgcgctggcg ggcgtcggaa
    24001 tgttcatcgg cctgctcatc tttttaagcg gtcatcgcca ctttcagcag acgcgcggtg
    24061 ttaatcgccc cgcgctgcgg gcggttaaat tcgcccttcc aacctggggt tggctggtat
    24121 taatgctgtg tatcgcgccg gtattcttca ccctcctgct ggaaaataac tggtctggct
    24181 atgtgctggc cattgtctgc gtcttcgcgg cgcaacttat cgcccgtatt atggttaaat
    24241 ttcccgaaca ccgtcgcgcc ttgtggcaaa tcgttctgtt aatgatcacc ggcactctct
    24301 tttgggttct ggcgcagcag ggcggaagtt cgatcagttt attcatcgac cgttttgtca
    24361 accgccactg gctgaatatg accgtcccca ccgcattgtt ccagtcggtc aatgcgattg
    24421 cggtgatggc ggcgggcgtg gtgctggcgt ggctgagcag cccgaaagag agcgcccgct
    24481 cggtgctgcg cgtctggctt aaatttgccg tggggctgat attaatgggc ggcggtttta
    24541 tgctgctggc gctaaacgcg catcaggccc ggttagatgg gcaggcatca atgggaatga
    24601 tgatcgcagg gctggcgctg atgggctttg cggagctgtt tattgatccg gtcgcgatgg
    24661 cgcaaattac ccgcctcaat ctgcctggcg tcacgggcgt actgaccggt atttatatgc
    24721 tggcgaccgg cgcgatcgct aactggctgg ctggcgtcgt cgcgcaacaa accacggaat
    24781 cgcaaattag tgatacggcg gtagccgcct acggacactt tttctcgcaa atgagcgagt
    24841 ggacactaag ttgcgtggcg ctgatcgtcg ccattgtcgg cctgagatgg atttgcaccc
    24901 ggactacatc ggcgctaccg cagggcgatt aaacggtggt tcgctgccca caaggaggag
    24961 acgggcagcg aatcggcaca tcagatagcc gcgtcgtctt cttcgccagt acggatacga
    25021 ataacgcggg cgacatcaaa gacaaagatc ttaccgtcgc cgattttccc cgtctgcgcg
    25081 gtacgaatga tggtatcaac acaggtatcc acgatgtcgt caggcacaac gatttcaatt
    25141 tttaccttcg gcagaaaatc caccatatat tccgcgccgc gatacagctc ggtgtggcct
    25201 ttttgacggc caaagccttt gacttcagtg accgtcatac cggtaatacc tacctcggcc
    25261 agcgcttcac ggacatcgtc cagcttgaag ggtttaataa tcgcatcaat ctttttcatg
    25321 ctattccttg aaaaggtcgc ctgtgttttg atcggttaaa cgtaacatat ttcgcgctac
    25381 tttacggcat gaaaactact ctttgaaatc attcgcatcc agttcgtgac gggagagtag
    25441 cttatagaat tccgtgcggt tgcgccccgc catccttgcc gcgtgcgtca cgttaccttt
    25501 ggtaatttgc agtaacttgc gcagatagtt cagttcaaat tggtttcgcg cttcggcaaa
    25561 agttggcagc gcggtgtttt cgccttccag cgcctgctcg accaatgcat cgctgatcac
    25621 cggcgaagag gttaacgcca cacattgttc aatgacgttg accagttggc gcacgttgcc
    25681 cggccagctt gccgtcatca gccgtttcat tgcatcagta gaaaaggcgc gaacaaacgg
    25741 tttatgccgc tgtgccgact gtctgagcag atgattagcc agcagcggaa tatcctcggt
    25801 acgctccgcc agcgccggaa ttttcaggct cacgacattc agccggtagt acaaatcttc
    25861 acgaaattcg ccccgcgcca tcgccttcgg cagatcgcgg tgcgtcgcgg aaataattcg
    25921 cacgtcgata tcaatatcgc gattgctgcc cagcggcctg actttgcgct cctgtaacac
    25981 ccgcagcagc ttcacctgta acggcgcggg catatcgcca atttcatcca gaaacagcgt
    26041 gccgccttcc gccgcctgga acaacccttc acgattgctc actgcgccgg taaaggcgcc
    26101 gcgcgcatgg ccgaataatt cggactccag caactgttcc ggtaacgcgc cgcagttgat
    26161 ggcgacaaac ggcttgttat tgcgcgggct ggcattatga atcgcctgtg cgaaaatctc
    26221 tttcccggtg ccgctttgtc cgttaatcaa tacgctgaca tccgactgcg cgaccatgcg
    26281 cgcctgttca agcagtcgca gcatcagcgg gctacgggta acgatagcgt tgcgccagct
    26341 atcgtccgtc gcgggagcgg actgctccag cgcttcatct atcgctttat ataacgcgtc
    26401 tctgtcgatc ggcttcgtca aaaagctgaa tacgcccttc tgggtagcgg ccaccgcatc
    26461 cggaatagaa ccatgcgccg tcagaataat aaccggcatt cccggctgta ctttctgaat
    26521 ttctgtgaac agttgcatac catccatttc gtccatgcgc aggtcgctta ttaccagatc
    26581 cactttttcc cgatgcagta cccgtagtcc ttcctggccg ctctctgcgg tcacgacgct
    26641 gtatccttca ctggtcaggc gcataccgag caatttcagt aatccgggat cgtcatcgac
    26701 cagcagcagg tgcgccggtt tacggcttat catggcgtta cctcatcttg tgacggcgac
    26761 ggcgccgcgc catcttcaga cgtcgcgggt ttgtcattcg tatgcggcgt atcggcgttg
    26821 taattccctg ccggttttcg tgtcgaaagc tggcgctcaa tgtcggttaa actctccagc
    26881 ttacgggtag taagatcgag ctgcgtttgc aaggcctgtt gctgctggcg caacgcatcc
    26941 agctcactat ctgacgtttg ctggagtttg ctataacgct gacgttcggc agaaagcgct
    27001 aattgcagcg cctgaccgtc atgccagatt tggtagacgg gccgtacctg agccggtatt
    27061 tgcgcgctta acgcctccag acgggtcact atggcgcgcc gctccggcgg cgtaattttt
    27121 gcatccgcca gtaaaatccc gcgcctgaag gcattctgcc agttatcatc cgtcaacgcg
    27181 cgcgcctctg cgcgcgactg aaccggcatc agacgatcgg cgcagtcaat cgtgcgtagc
    27241 cagtacagcg gattcgtctc caccgcctgc ccgcgtagcg accagatatc cgcgcacgcc
    27301 gtcgggagat aatccgccag ttgataatgg gggagcgtgt cctgcgctgc gctaccgggc
    27361 agttgctgtg aagcatgggg aacacatgcg gtcagcgcca gacacgatat gcccaccggt
    27421 attccccatc gcaaaaggca tcgtttaata gtttggacga aaacgtgtga catacgcacc
    27481 aggcttaaat tcatattagt gtttgtcaga tgcaggcaat ggcagcgaga tgcgaaaaca
    27541 aacttcctgc gctttgtcat ccaccagctg gatctctccc tgcattcgac gaatacaatc
    27601 tctggcgata ctcagcccta acccactgcc ttttaccgcc ccttttcgct ggtggcttcc
    27661 ctggaaaaaa ggctcaaaaa tcatttctct ttcggtttgc ggaatcggtt cgccgctatt
    27721 aaccacatcg atataaaccg tggagccctg agagcgacta cggatacaaa tgttaccgga
    27781 ttcagcgcca tagtgcacag cgttggaata gagattatcc agcacgctca tcagcaacat
    27841 gggctctgct atgcagcgtt cggcctccag gtcgacatcg gtatgcatca ttttagcgcg
    27901 ggcaggcaaa ctgtgggcgg aaaccaccat atccacaagc ggcgcgatat cgaccgcttc
    27961 cagctctgtg gcactgtcta ccagtttccg gttgtaatca agcaattgct caatcaattt
    28021 ttgtaaatta cgactgctgt catccagaat atcgaccacc tctttttgct ccggcgtcag
    28081 cggcccaacc acctgatcgg ccagcagctc tgtcccctcg cgcatactgg ccagcggagt
    28141 tttcagctca tgggacaagt gacgtagaaa ctgatggcgt tgggattcca gccacgccag
    28201 acgctcactc agccagataa tgcgctgccc caccgatcgt aattcacgcg gaccggtaaa
    28261 ggtgacggta ttccccaaag aacggccttc gcccaggcga ttaatcatcc gttcaattcc
    28321 tttcaccggc ccgataatca tgcgggtaaa aagtagcacc atcgccaggc tcaccagaaa
    28381 tagcaccagc gcctgccagc cgaaaaattg tccgcgctcg gcgatttctt gttgtaactg
    28441 ctgcccgcgc gagtaaacca cagtacgcgt cgcctgcacc atttccgtat tcgcgttggc
    28501 aaaggcctcc agacgcgcgg ccgctgccgc ttccgggccg ctatctttac actgcaattg
    28561 cgccagcgcg tttaaatcct ggcgtaacgc ctgatacaac ttatcatccg gcaagacgcc
    28621 ggcatgggca tccagcatat cgctatagcg cttacgctgg ctttgataca cttttgccag
    28681 cgtcggatcg tcaagcacgc aatactgtcg gtagcttcgc tccatctcca gcgcgacgtt
    28741 ggtcatcgcc tcgctgcgcc gggcgtcaat aagcgtgctg cggttagtca ccgcagcctg
    28801 atcgcttaac gcgttaaggc tttgccacgc ctgccaggcc agaaccagca acggcagcag
    28861 gatcagcaaa aaggccagca tgaccaattg tcgtaaagaa cgggggaaaa cagaccagcg
    28921 cttcaacgtg tcgctcacat aaaaagaaga ataaaaaaga tgctaaccga ggggagcgtc
    28981 agatacaaca aagccgggct aaacccggct ttgttatgga ataaggcggt gcctaactcg
    29041 acgtttcgcc cggaggttga taaagctacg ctattatcag aagttagacg gcaggcacct
    29101 tgttgtgcgt cattcgaagt ttatgtagcg cgtccctaag gggctgacat aagaaggtga
    29161 atgagccact ggttaccatt atgcagtaat tgtgccaaca ttcaaaagac tttgttaaca
    29221 caatgataga tatgaaaaat atcgttattc atgctaaaaa tggctctgtc tgttttttgt
    29281 cctttctgtc gtcaatcagc aacacctgca acacctaaaa ataaaatcat ttaaaatcaa
    29341 atagttaaat gtctcttttt ggcgacaacc tatccccact catgtcggga tttcccgaca
    29401 ctttaatctt gcggcataag cgctagttta ttgccggatg gcggcgtaaa cgccttatcc
    29461 gccctaccgc ttgacgttca agacggtagc tacaaccgcg cttccccgtg ggcctgataa
    29521 gcgccgtcta caaaaaagcc cctcgtgaag aggggcttaa tggctatcgg gctaattaac
    29581 caagctgctt acgcgcatta cggaagatac gcatccacgg gctatcctcg ccccagtttt
    29641 ccgggtgcca ggagttggcg acggtgcgga atacgcgttc cggatgcggc atcataatcg
    29701 tcacccgacc gttttcggtc gtcaccgccg tgatgccgtt cggcgaaccg ttcgggttag
    29761 ccggataggt ttcggtcacc ttaccaaagt tatcaacgta gcgcagagcg accaggcctt
    29821 tgctctcaag cgcggcaaga tgcgcatcgt cacgcacctc aacgcgccct tccccatggg
    29881 aaaccgcaat cggcatctgt gagcctacca ttccttgcag cagcagcgat gggctttgcg
    29941 tcacttccac caggctgaag cgggcttcga agcggtcaga atggttacgt acaaaacgcg
    30001 gccacagttc gctgcccggg atcagctcgc gcagattcga catcatctgg caaccgttgc
    30061 acacgcccag cgccagcgtc tgcggacgat ggaagaaggt ttcgaattcg tcgcgcaccc
    30121 gatggttaaa cagaatggat ttcgcccagc cttcgcccgc ccccagcacg tcgccgtagg
    30181 aaaagccgcc gcaagccacc agcgcatgga agttgcccag accgatacga ccgcccagca
    30241 ggtcgctcat atggacgtca atcgcgtcaa agcccgcacg atggaacgcc gccgccatct
    30301 ccacgtgaga gttcaccccc tgctcgcgca gtacagcgac tttcggtcgt gcgcctgtcg
    30361 caatgtacgg cgcggcgata tcttcattaa tatcaaacga cagcttcacg ttgaggcccg
    30421 gatcggcatc attcgctttc gcctcgtgtt cctggtcagc acattgcgga ttgtcgcgca
    30481 gacgctgcat ctgccaggtg gtttccgccc accagacacg cagcgtagta cggctttcgc
    30541 tgaataccgt ccgatcatta gcggtaatca caaagcgatc gccagccagg gcctgaccaa
    30601 ggtagtggac gcagtcagca agaccgtact gcgccaacag cgtttcgacc gcgtctctgt
    30661 cttcagcgcg tacctgaatc acgccgccca gctcctcgtt gaacagtgcg
//
LOCUS       DAGWFR010000031        29648 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.031, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000031 DAGWFR010000000
VERSION     DAGWFR010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 29648)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29648)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29648
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.031"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..799
                     /gene="mnmC"
                     /locus_tag="MOX77_001503"
     CDS             <1..799
                     /gene="mnmC"
                     /locus_tag="MOX77_001503"
                     /EC_number="2.1.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001540542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-dependent
                     5-carboxymethylaminomethyl-2-thiouridine(34)
                     oxidoreductase MnmC"
                     /protein_id="HCA3357075.1"
                     /translation="AGGWLCPEQLTRAVIALATEQGLQTRFRHTLTSLVAQESRWQLR
                     FTSGETASHETVVLANGHQINRFDQTRPLPVYAVGGQVSHIPTTPALSALRQVLCYDG
                     YLTPQNPHNQQHCIGASYHRGDESTVWREEDQRQNRQRLLDCFPDANWATEVDVSGNS
                     ARCGVRCATRDHLPMVGNVPDYHATLTHYADLADNKTSAASAPVYPGLFMLGALGSRG
                     LCSAPLCAEILAAQMSNEPIPLDAGTLAALNPNRLWVRKLLKGKAVK"
     gene            complement(851..1126)
                     /locus_tag="MOX77_001504"
     CDS             complement(851..1126)
                     /locus_tag="MOX77_001504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfcL family protein"
                     /protein_id="HCA3357076.1"
                     /translation="MIAEFESRILALIDDMVEHASDDELFASGYLRGHLTLAIAELES
                     GDDHSVEAVYANVSQSLEKAIGAGELSPRDQALVKAMWDNLFDKAKQ"
     gene            complement(1159..1708)
                     /locus_tag="MOX77_001505"
                     /pseudo
     CDS             complement(1159..1708)
                     /locus_tag="MOX77_001505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461323.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P hydroxylase"
     gene            complement(1708..2517)
                     /locus_tag="MOX77_001506"
     CDS             complement(1708..2517)
                     /locus_tag="MOX77_001506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HCA3357077.1"
                     /translation="MDNFYDLFMVSPLLLVVLFFVAVLAGFIDSIAGGGGLLTIPALM
                     AAGMSPANALATNKLQACGGSLSSSLYFIRRKVVNLAEQKLNILMTFIGSMSGALLVQ
                     HVQADILRQILPILVIFIGLYFLLMPKLGEEDRQRRLYGLPFALIAGGCVGFYDGFFG
                     PAAGSFYALAFVTLCGYNLAKSTAHAKVLNATSNVGGLLLFIIGGKVIWATGFVMLVG
                     QFLGARMGSRLVLSKGQKLIRPMIVIVSAVMSARLLYDSHGQEILHWLGMN"
     gene            complement(2517..3341)
                     /gene="mepA"
                     /locus_tag="MOX77_001507"
     CDS             complement(2517..3341)
                     /gene="mepA"
                     /locus_tag="MOX77_001507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-insensitive murein endopeptidase"
                     /protein_id="HCA3357078.1"
                     /translation="MKKTAIALLAWFVSSASLAATPWQKITHPVPGAAQSIGSFANGC
                     IIGADTLPVQSDNYQVMRTDQRRYFGHPDLVMFIQRLSHQAQQRGLGTVLIGDMGMPA
                     GGRFNGGHASHQTGLDVDIFLQLPKTRWSQAQLLRPQALDLVSRDGKHVVPSRWSSDI
                     ASLIKLAAQDNDVTRIFVNPAIKQQLCLDAGSDRDWLRKVRPWFQHRAHMHVRLRCPA
                     DSLECEDQPLPPPGDGCGAELQSWFEPPKPGTTKPEKKTPPPLPPSCQALLDEHVL"
     gene            complement(3345..4430)
                     /gene="aroC"
                     /locus_tag="MOX77_001508"
     CDS             complement(3345..4430)
                     /gene="aroC"
                     /locus_tag="MOX77_001508"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HCA3357079.1"
                     /translation="MAGNTIGQLFRVTTFGESHGLALGGIVDGVPPGIPLTEADLQHD
                     LDRRRPGTSRYTTQRREPDQVKILSGVFDGVTTGTSIGLLIENTDQRSQDYSAIKDVF
                     RPGHADYTYEQKYGLRDYRGGGRSSARETAMRVAAGAIAKKYLAEKFGIEIRGCLTQM
                     GDIPLEIKDWRQVELNPFFCPDADKLDALDELMRALKKEGDSIGAKVTVMASGVPAGL
                     GEPVFDRLDADIAHALMSINAVKGVEIGEGFNVVALRGSQNRDEITAQGFQSNHAGGI
                     LGGISSGQHIVAHMALKPTSSITVPGRTINRMGEEVEMITKGRHDPCVGIRAVPIAEA
                     MLAIVLMDHLLRHRAQNADVKTEIPRW"
     gene            complement(4466..5398)
                     /gene="prmB"
                     /locus_tag="MOX77_001509"
     CDS             complement(4466..5398)
                     /gene="prmB"
                     /locus_tag="MOX77_001509"
                     /EC_number="2.1.1.298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3 N(5)-glutamine
                     methyltransferase"
                     /protein_id="HCA3357080.1"
                     /translation="MDKIFVDEAVSELHTIQDMLRWAVSRFSAANIWYGHGTDNPWDE
                     AVQLVLPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRINERIPVAYLTNKAWFCGH
                     EFYVDERVLVPRSPIGELINNHFAGLISQQPKYILDMCTGSGCIAIACAYAFPDAEVD
                     AVDISPDALAVAEHNIEEHGLIHHVTPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSD
                     LPNEYRHEPELGLASGTDGLKLTRRILGNAPDYLSDDGVLICEVGNSMVHLMEQYPDV
                     PFTWLEFDNGGDGVFMLTKAQLLAAREHFNIYKD"
     gene            5564..6115
                     /gene="smrB"
                     /locus_tag="MOX77_001510"
     CDS             5564..6115
                     /gene="smrB"
                     /locus_tag="MOX77_001510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease SmrB"
                     /protein_id="HCA3357081.1"
                     /translation="MKKKTSLSEEDQALFRQLMVGTRKIKQDTIVHRPLRKKITEVPT
                     RRLIQEQADASHYFSDEFQPLLNTEGPVKYVREDVSHFELKKMRRGDYSPELFLDLHG
                     LTQLQAKQELGALIAACRREHIFCACVMHGHGKHILKQQTPLWLAQHPHVMAFHQAPK
                     EYGGDAALLVLIEVEEWQPPELP"
     gene            complement(6164..6649)
                     /gene="sixA"
                     /locus_tag="MOX77_001511"
     CDS             complement(6164..6649)
                     /gene="sixA"
                     /locus_tag="MOX77_001511"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphohistidine phosphatase SixA"
                     /protein_id="HCA3357082.1"
                     /translation="MQVFIMRHGDAALDAASDSVRPLTSCGCDESRLMANWLKGQKVD
                     IERVLVSPFLRAEQTLDVVGDCMNLPTQVDVLPELTPCGDVGLVSAYLQALANEEIGS
                     VLVISHLPLVGYLVSELCPGETPPMFTTSAIANVTLDESGKGTFNWQMSPCNLKMAKA
                     I"
     gene            complement(6858..9005)
                     /gene="fadJ"
                     /locus_tag="MOX77_001512"
     CDS             complement(6858..9005)
                     /gene="fadJ"
                     /locus_tag="MOX77_001512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid oxidation complex subunit alpha FadJ"
                     /protein_id="HCA3357083.1"
                     /translation="MTTTSAFMLSVRLDNVAVVAIDVPGEKVNTLKAEFAAQVRAILK
                     QIRENKALQGVVFISAKADNFIAGADINMIGHCQNAQEAETLARQGQQLMAEIQALPV
                     PVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVG
                     VSTALDMILTGKQLRARQALKAGLVDDVVPQTILLEAAVELAKKERLAQRTLPVRERI
                     LAGPLGRALLFRLVRKKTAQKTQGNYPATERIIDVIETGLAQGSSSGYDAEARAFGEL
                     AMTPQSQALRAVFFASTEVKKDPGSDAPPGPLNSVGILGGGLMGGGIAWVTACKGGLP
                     VRIKDINTQGINHALKYSWDLLETKVRRRHIKASERDKQLALISGSTDYRGFSHRDLV
                     IEAVFEDLPLKQQMVAEVEQNCATHTIFASNTSSLPIGDIAANAARPEQVIGLHFFSP
                     VEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIVVSDKAGFYVNRILAPYINEAIR
                     MLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGERFSAPANVV
                     ASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLIGVQGQSRLSAQQVAERCVM
                     LMLNEAARCFDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEMVATLQRLA
                     ALYGPRYAPCEQLVRMAERREHFWTNGETDQGN"
     gene            complement(9005..10315)
                     /gene="fadI"
                     /locus_tag="MOX77_001513"
     CDS             complement(9005..10315)
                     /gene="fadI"
                     /locus_tag="MOX77_001513"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461331.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase FadI"
                     /protein_id="HCA3357084.1"
                     /translation="MRQALPLVTRQGDRIAIVSGLRTPFARQATAFHGIPAVDLGKMV
                     VGELLARSEIPADAIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATS
                     FQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKALARVLVDVNKARTTRQRLTLF
                     SRLRLRDLLPVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWA
                     EGKLAEEVMTTYVPPYKNPFAEDNNIRGASTLADYAKLRPAFDRKHGSVTAANSTPLT
                     DGAAAVILMTESRAKELGLRPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTM
                     ADLTLFDMHEAFAAQTLANLQLLGSERFAREVFGRAQATGEVDDAKFNVLGGSIAYGH
                     PFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLEAE"
     gene            complement(10493..10777)
                     /locus_tag="MOX77_001514"
     CDS             complement(10493..10777)
                     /locus_tag="MOX77_001514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfcZ/YiiS family protein"
                     /protein_id="HCA3357085.1"
                     /translation="MSKCSADETPVCCCMDVGTIMDNSDCTASYSRVFATRAEAEETL
                     AALTEKARSVESEPCQITPTFTEESEGVRLDIDFVFACEAETLIFQLGLR"
     gene            11148..12455
                     /gene="fadL"
                     /locus_tag="MOX77_001515"
     CDS             11148..12455
                     /gene="fadL"
                     /locus_tag="MOX77_001515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416846.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain fatty acid transporter FadL"
                     /protein_id="HCA3357086.1"
                     /translation="MSQKTLFTKSALAVAVAIISTQAWSAGFQLNEFSSSGLGRAYSG
                     EGAIADDAGNVSRNPALITMFDRPTFSAGAVYIDPDVNISGTSPSRRTLDADNIAPTA
                     WVPNVHFVAPINDQFGWGASITSNYGLATEFNDTYAGGSVGGTTDLETMNLNLSGAYR
                     LNEAWSFGLGFDAVYARAKIERFAGDLGQLVAAQNPALAPVAGQILSDTKIAHLNGNQ
                     WGFGWNAGILYELDKNNRYALTYRSEVKIDFKGNYSSDLPIAINRFNLPIPTATGGAT
                     QSGYLTLNLPEMWEVSGYNRVAPQWAIHYSLAYTSWSQFQELKAKSTAGDTLFEKHEG
                     FKDAYRIALGTTYYYDDNWTFRTGIAFDDSPVPAQNRSISIPDQDRFWLSAGTTYAFN
                     KDASVDVGVSYMHGQSVKINEGPYQFESEGKAWLFGTNFNYAF"
     gene            complement(12516..13271)
                     /gene="mlaA"
                     /locus_tag="MOX77_001516"
     CDS             complement(12516..13271)
                     /gene="mlaA"
                     /locus_tag="MOX77_001516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid-binding lipoprotein MlaA"
                     /protein_id="HCA3357087.1"
                     /translation="MKLRLSALALGTTLLVGCASSGTEQQGRSDPFEGFNRTMYNFNF
                     NVLDPYVVRPVAVAWRDYVPQPARNGLSNFTGNLEEPAIMVNYFLQGDPYQGMVHFTR
                     FFLNTLLGMGGFIDVAGMANPKLQRVEPHRFGSTLGHYGVGYGPYMQLPFYGSFTLRE
                     DGGDMADTLYPVLSWLTWPMSIGKWTIEGIETRAQLLDSDGLLRQSSDPYIMVREAYF
                     QRHDFIANGGKLKPQENPNAQAIQDELKEIDSE"
     gene            13560..14501
                     /locus_tag="MOX77_001517"
     CDS             13560..14501
                     /locus_tag="MOX77_001517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate/nitrite transporter family protein"
                     /protein_id="HCA3357088.1"
                     /translation="MDSLNDDKINRHSSDLEVESEEKQSGKEIEVDEDRLPSRAMAIH
                     EHIRQDGEKEMERDAMALLWSAIAAGLSMGASLLAKGIFHVQLEGVPGGFLLENLGYT
                     FGFIIVIMARQQLFTENTVTAVLPVMQNPTLSNVGLLMRLWGVVLLGNLIGTGVAAWA
                     FEYMPIFDEETRDAFVKIGMEVMKNSPTEMFANAIISGWIIATMVWMFPAAGGAKIVV
                     IILMTWLIALGDTTHIVVGSVEILYLVFNGTLPWSDFFWPFALPTLAGNICGGTFIFA
                     LMSHAQIRNDMSNKRKEEARLRGERLERERKKAEKQR"
     gene            14577..14651
                     /locus_tag="MOX77_001518"
     tRNA            14577..14651
                     /locus_tag="MOX77_001518"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:14610..14612,aa:Arg,seq:cct)
     gene            complement(14799..15423)
                     /locus_tag="MOX77_001519"
                     /pseudo
     CDS             complement(14799..15423)
                     /locus_tag="MOX77_001519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014609409.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            15744..16133
                     /locus_tag="MOX77_001520"
     CDS             15744..16133
                     /locus_tag="MOX77_001520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001696807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GtrA family protein"
                     /protein_id="HCA3357089.1"
                     /translation="MLKLFAKYTSIGVLNTLIHWGVFAFCMYGMHTHQALTNFSDFVI
                     AVSFSFYANARFTFNASTTAILYMMYMGFMGTLSAVVGWMADQCSLPPLVTLITFSAI
                     SLVCGFIYSRFIIFRDKNENLSCRPGF"
     gene            16102..16356
                     /locus_tag="MOX77_001521"
     CDS             16102..16356
                     /locus_tag="MOX77_001521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000703599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HCA3357090.1"
                     /translation="MKISLVVLVFNEEDTIPIFYRTVHEFNELEKYKVEIIFINDGSK
                     DVTESIIKIIAVSDPLVIPFSFTRNFGNDARCTTILLIFF"
     gene            16373..18295
                     /locus_tag="MOX77_001522"
     CDS             16373..18295
                     /locus_tag="MOX77_001522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000400614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HCA3357091.1"
                     /translation="MEHLKYRPDIDGLRAIAVLSVVIFHYFPSLLPGGFVGVDIFFVI
                     SGYLITSIILKSASNKSFSYLDFYKRRVLRIFPALSIVLVSCLIVGWIYLFQDDYKLL
                     GKHVFSGSFFISNFTLWSESGYFDSKSYLKPLLHLWSLGIEEQFYIIWPVVILLCFRS
                     KNHNRNIVLSCATIFIISYAISIFTMASDGGANYYSPASRFWELMAGAIISTLRFIGI
                     NTSLSKLMSLLGIILIALSITMIDEKMSFPGYIAIIPILGASLIIASNGNDLVVSKLL
                     SVRPVVFFGLISYPLYLWHWPIYSFYRSIFAGSPDYHELTLLLLLSFFLAILTYYLIE
                     KPLRNSRSKYITAILLALSVFGTGLIGAFIFHINGVKDREINKSASEYASVTDVYNYY
                     KYGELLRGGICHSVQLTAAISNGCIKNGKHNIFIIGDSYAAALFNGLSHYIDNKGSDY
                     IISQMTDGNAPPLFVDGKDDLQRSVITLNNNRINEIKRVQPEVVLLTWSVRGTNGVHD
                     KKLAIDALSLTIKKIKEASPDSRIVFIGPVPEWNANLVKIISNYLSEFKKTPPLYMTY
                     GLNSEISEWDSYFSNNVPKMGIEYISAYKALCNESGCLTRVGNGPDFITAVDWGHLTK
                     PGSDFLFNKIGNKIIK"
     gene            complement(18466..18912)
                     /locus_tag="MOX77_001523"
                     /pseudo
     CDS             complement(18466..18912)
                     /locus_tag="MOX77_001523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000343613.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(19285..19428)
                     /locus_tag="MOX77_001524"
     CDS             complement(19285..19428)
                     /locus_tag="MOX77_001524"
                     /inference="COORDINATES: protein motif:HMM:NF020812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357092.1"
                     /translation="MDGWGSYVSNILMQDCAGSGGLWYTYGKTFTYISVIDTKTLTLT
                     NCL"
     gene            complement(19444..19590)
                     /locus_tag="MOX77_001525"
     CDS             complement(19444..19590)
                     /locus_tag="MOX77_001525"
                     /inference="COORDINATES: protein motif:HMM:NF020812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357093.1"
                     /translation="MYSLWDCFNLWADIGNEKDRPGDYSLSEYPVHQLPTNHLVDGLV
                     AIGS"
     gene            complement(19776..20714)
                     /gene="pgtE"
                     /locus_tag="MOX77_001526"
     CDS             complement(19776..20714)
                     /gene="pgtE"
                     /locus_tag="MOX77_001526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="omptin family outer membrane protease PgtE"
                     /protein_id="HCA3357094.1"
                     /translation="MKKHAIAVMMIAVFSESVYAESTLFIPDVSPESVTTSLSVGVLN
                     GKSRELVYDTDTGRKLSQLDWKIKNVATLQGDLSWEPYSFMTLDARGWTSLASGSGHM
                     VDHDWMSSEQPGWTDRSIHPDTSANYANEYDLNVKGWLLQGDNYKAGVTAGYQETRFS
                     WTARGGSYIYDNGRYIGNFPHGVRGIGYSQRFEMPYIGLAGDYRINDFECNVLFKYSD
                     WVNAHDNDEHYMRKLTFREKTENSRYYGASIDAGYYITSNAKIFAEFAYSKYEEGKGG
                     TQIIDKTSGNTAYFGGDAAGIANNNYTVTAGLQYRF"
     gene            complement(20982..22229)
                     /gene="pgtA"
                     /locus_tag="MOX77_001527"
     CDS             complement(20982..22229)
                     /gene="pgtA"
                     /locus_tag="MOX77_001527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator PgtA"
                     /protein_id="HCA3357095.1"
                     /translation="MLNDECSILLIDDDVDVLDAYTQMLEQAGYRVRGFTHPFEAKEW
                     VKADWEGIVLSDVCMPGCSGIDLMTLFHQDDDQLPILLITGHGDVPMAVDAVKKGAWD
                     FLQKPVDPGKLLILIEDALRQRRSVIARRQYCQQTLQVDLIGRSEWMNQFRQRLQQLA
                     ETDIAVWFYGEHDTGRMTGARYLHQLGRNAKGPFVRYELTPENAGQLETFIDQAQGGT
                     LVLSYPEYLTREQQHHLARLQSLEHRPFRLVGVGSASLVEQAAANQIAAELYYCFAMT
                     QIACQSLSQRPDDIEPLFRHYLRKACLRLNHPVPEIAGELLKGIMRRAWPSNVRELAN
                     AAELFAVGVLPLAETVNPQLLLQEPTPLDRRVEEYERQIITEALNIHQGRINEVAEYL
                     QIPRKKLYLRMKKYGLSKEHYKF"
     gene            complement(22219..24225)
                     /gene="pgtB"
                     /locus_tag="MOX77_001528"
     CDS             complement(22219..24225)
                     /gene="pgtB"
                     /locus_tag="MOX77_001528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     PgtB"
                     /protein_id="HCA3357096.1"
                     /translation="MKGRLLQRLRQLSISNSLRGAFLTGALLTLIVSMVSLYSWHEQS
                     SQVRYSLDEYFPRIHSAFLIEGNLNLAVDQLNEFLLAPNTTVRLQLRTQIIQHLDKIE
                     RLSQGLQLAERRQLAVILQDSRTLLAELDNALYNMFLVREKVSELSARIDWLHDDFTT
                     ELNSLVQDFTWQQGTLLDQIEANQGDAAQYLQRSREVQNEQQQVYTLARIENQIVDDL
                     RDRLNELKSGNNDGMLVETHIRYLENLKKTADENIRALDDWPSTITLRQTIDELLEIG
                     MVKNKMPDTMRDYVAAQKALLDASRAREATLGRFRTLLEAQLGSSHQQMQTFNQRLEQ
                     IVRVSGGLILVTTLLALLLAWGLNHYFIRSRLVKRFTALNQAVVQIGLGRTDSTIPVY
                     GRDELGRIARLLRHTLGQLNMQRRQLEQEVAERKEIEADLRAMQDELIQTAKLAVVGQ
                     TMTTLAHEINQPLNALSMYLFTAGRAIEQGQSGQARNTLTKAEGLINRIDAIIRSLRQ
                     FTRRAELETPLYPVDLRQTFVAAWELLAMRHQSRQGALSLPTDTVWVSGDEVRIQQVL
                     VNVLANALDACSHDAAIAVTWQTQGEALEVYIADNGPGWPGALLPSLLKPFTTSKAVG
                     LGIGLSISVSLMAQMKGDLRLASTLTRNACVVLQFSVTDVDDVE"
     gene            complement(24222..25415)
                     /gene="pgtC"
                     /locus_tag="MOX77_001529"
     CDS             complement(24222..25415)
                     /gene="pgtC"
                     /locus_tag="MOX77_001529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate transport regulator PgtC"
                     /protein_id="HCA3357097.1"
                     /translation="MFGSCQAYSRELVMATTFSPSATAWIIQRWQTEPGSVMIRTLNR
                     TSGSLEQLLDTANAENVDLILTSSPMLLQHLQEHQKLALLDSAPAASQKLVPRSIRST
                     SVAVAVSGFGLLINRSALAARHLPPPADWQDMGLPSYQGALLMSSPSRSDTNHLMVES
                     LLQQKGWTAGWATLLAISGNLVTISSRSFGVADKIKSGLGVAGPVIDNYANLLLNDPN
                     LAFTYFPYSAVSPTYVAVLKNSRHADEARAFIHYLLSPKGQRILADANTGKYPVAPLS
                     ADNPRAAQQQRLMAQPPLNYRLILKRQQLVQRMFDTAISFRLAQLKDAWRALHSAETR
                     LKRPLPEIRALLTSVPVDAASSEDETWLAQFDNKSFAEQKMMEWQIWFLNNQRLAIHK
                     LEELK"
     gene            25851..27242
                     /gene="pgtP"
                     /locus_tag="MOX77_001530"
     CDS             25851..27242
                     /gene="pgtP"
                     /locus_tag="MOX77_001530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate transporter PgtP"
                     /protein_id="HCA3357098.1"
                     /translation="MLTILKTGRSAHKVPPEKVQATYGRYRIQALLSVFLGYLAYYIV
                     RNNFTLSTPYLKEQLDLSATQIGLLSSCMLIAYGISKGVMSSLADKASPKVFMACGLV
                     LCVIVNVGLGFSSAFWIFAALVVFNGLFQGMGVGPSFITIANWFPRRERGRVGAFWNI
                     SHNVGGGIVAPIVGAAFAILGSEHWQSASYIVPACVAVIFALIVLVLGKGSPREEGLP
                     SLEQMMPEEKVILKTKNTAKAPENMSAWQIFCTYVLRNKNAWYISLVDVFVYMVRFGM
                     ISWLPIYLLTVKHFSKEQMSVAFLFFEWAAIPSTLLAGWLSDKLFKGRRMPLAMICMA
                     LIFVCLIGYWKSESLLMVTIFAAIVGCLIYVPQFLASVQTMEIVPSFAVGSAVGLRGF
                     MSYIFGASLGTSLFGVMVDKLGWYGGFYLLMGGIVCCILFCYLSHRGALELERQRQNA
                     LHNQDSLQLADAQ"
     gene            complement(27481..27723)
                     /locus_tag="MOX77_001531"
     CDS             complement(27481..27723)
                     /locus_tag="MOX77_001531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfdY family protein"
                     /protein_id="HCA3357099.1"
                     /translation="MIYLWTFLAISILAVSGYIGQVMGAFSAVSSFTGMVILAALIYL
                     LNVWLQDGDDIVSGLLLFLAPACGLIIRFMVGYGKR"
     gene            28244..29164
                     /gene="lpxP"
                     /locus_tag="MOX77_001532"
     CDS             28244..29164
                     /gene="lpxP"
                     /locus_tag="MOX77_001532"
                     /EC_number="2.3.1.242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kdo(2)-lipid IV(A) palmitoleoyltransferase"
                     /protein_id="HCA3357100.1"
                     /translation="MFPQSKFSRAFLHPRYWLTWFGVGVLWLLVQLPYPVLRFLGTRT
                     GKLARPFLKRRESIAQKNIELCFPTLSREEREKLIAENFHSLGMALLETGMAWFWPDS
                     RVRKWFDVDGLDNLTRAQAQNRGVMVVGVHFMSLELGGRVMGLCQPMMATYRPHNNPL
                     MEWVQTRGRMRSNKAMIGRNNLRGIVGALKKGEAVWFAPDQDYGPKGSSFAPFFAVEN
                     VATTNGTYVLSRLSGAAMLTVTMVRKSDNSGYRLYITPEMEGYPADENQAAAYMNKII
                     EKEIMRAPEQYLWIHRRFKTRPLGEASLYI"
     gene            29567..29638
                     /gene="ypdK"
                     /locus_tag="MOX77_001533"
     CDS             29567..29638
                     /gene="ypdK"
                     /locus_tag="MOX77_001533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_077777854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein YpdK"
                     /protein_id="HCA3357101.1"
                     /translation="MKYFFMGISFMVIVWAGTFALMI"
BASE COUNT         7382 a         7718 c         7085 g         7463 t
ORIGIN      
        1 ggcaggcggc tggctgtgcc cggaacaatt aactcgcgca gtcatcgcac tggcgactga
       61 acagggttta caaacgcgct ttcgccatac gctcacgtcg ctcgttgcgc aggagtcgcg
      121 ctggcaactg cgctttacgt caggtgaaac cgccagccat gagactgtcg tcctggcgaa
      181 cggccatcag attaaccgtt ttgatcagac ccggccgctg ccggtttatg ccgtcggggg
      241 gcaggtcagt catattccca ccacccccgc cctctcggcg ttgcgtcagg tgttatgcta
      301 cgacggctat ctgacgccgc aaaatccgca taatcagcag cactgtattg gcgccagcta
      361 tcaccggggc gacgaaagca ccgtctggcg cgaagaagat cagcgtcaga accgacagcg
      421 tctgcttgac tgttttccgg atgcgaactg ggccacagag gttgacgtta gcggcaacag
      481 cgcccgttgc ggcgtgcgtt gcgccacccg cgaccatctg ccgatggtgg gcaatgtccc
      541 ggattaccac gccacgctga cgcattacgc cgatttagcc gataataaaa cgtcggcggc
      601 gtctgcgcct gtgtatccgg gtttatttat gctcggcgcg ctgggatcgc gtggtttgtg
      661 ttcagcgcca ttatgcgcag aaattctggc ggcgcagatg agtaacgagc cgattccact
      721 ggatgccggt acgctggcgg cgttaaatcc aaatcggtta tgggtgagaa agttattgaa
      781 gggaaaagcg gtgaagtaat gggccagtca atagcggaag gcggcaagcg tcgccttccg
      841 gtccacggcg ttattgtttt gccttgtcga acaaattgtc ccacatcgct ttgactaacg
      901 cctgatcgcg cggcgacagt tcgccggcgc cgatcgcttt ctccagactt tggctaacgt
      961 tggcatagac cgcctcaacg gagtggtcat caccgctctc cagctcggca atggctaacg
     1021 tcaggtggcc acgcaggtat ccactggcaa aaagctcatc gtcgctggcg tgctctacca
     1081 tatcgtcaat taatgccaga atgcgtgatt caaactccgc gatcatcttc tttcctcatt
     1141 gtaaacgtgg cgctggcttt aattaagcgc ttccggccac gggaactgtt ccgccttaag
     1201 ttcgggcgtg tgatagtaat tctgtagcgc tttgatgaag cgggccggac gttcaggaat
     1261 gccctgctcc agatacgcca ttacctgcgc atgaacccgg cgctgaaacg ccacgcgatc
     1321 cggctcaata tcgccttcca gattgtcgca actaacgttt aaagggatac cccgccgcca
     1381 cgcaaaacaa ccagtcgaaa gcctgtggct tcacctcaac gtcttcaaat tgactttggg
     1441 tctgcgcgtc gcgtccgtcc gggcagtacc agtaaccaaa gtcgaccagt tcgcggcgcg
     1501 ccttaccggc gatacaccag tgagaaatct catgcagcgc gctggcgtaa aacccatgcg
     1561 caaagacgat acggtggtac ggtacctgcg cgtcagcagg aagatagatc ggttcgtcgt
     1621 cgcctttaat cagacgggta ttaaattctt cggcaaagca gccgttaaaa atctcaatta
     1681 attgttcgta atggtgcgta ctgttcatta attcatcccc aaccagtgga ggatctcctg
     1741 tccgtggcta tcataaagta acctggcgct catcaccgcc gagacaataa cgatcatcgg
     1801 tctgataagc ttttggcctt tgctcaacac cagacgcgac cccattcgcg cccctaaaaa
     1861 ctgaccaacc agcatcacaa agcccgtcgc ccagatcact ttgccgccga tgataaataa
     1921 cagcaggccg ccaacgttgg aggtagcgtt aagcactttg gcatgtgccg tggatttcgc
     1981 caggttatag ccacataagg tgacaaacgc cagagcgtaa aacgaccctg cggcaggccc
     2041 gaaaaagccg tcgtaaaacc cgacgcatcc cccggctatc agcgcgaacg gtaatccata
     2101 caggcggcgc tggcgatctt cctcgcccag cttcggcatc aataaaaaat agaggccgat
     2161 gaaaatcacc aggatgggca agatctggcg caaaatatcc gcctgcacgt gctgcaccag
     2221 cagcgcgccg ctcatcgagc caatgaacgt catcagaata ttgagctttt gctcggccag
     2281 gtttaccact ttacggcgaa taaaatagag cgaagacgag agggagccgc cgcacgcctg
     2341 taatttattg gtcgccaacg cgtttgccgg cgacatcccg gcggccatca gcgcagggat
     2401 agtgagcagc cctccgcctc cggcgataga atcgataaat cctgccagta cggcgacaaa
     2461 aaacagcacc accagcagca gcggggagac cataaacaga tcataaaaat tgtccatcag
     2521 agtacatgct catccagtag cgcctggcag gaaggcggca acggcggcgg tgtcttcttc
     2581 tcaggctttg tggtgccagg ttttggcggt tcgaaccagc tttgcagttc agcgccgcat
     2641 ccatcgcccg gcgggggtaa aggttgatct tcgcactcca ggctgtcggc agggcagcgt
     2701 aaacgcacgt gcatatgcgc gcgatgctgg aaccaggggc gtactttacg tagccagtca
     2761 cgatcgcttc cggcatcgag gcaaagctgt tgtttaatag ccggattgac gaaaatacgg
     2821 gtgacgtcat tgtcttgtgc cgccagtttg atcagactgg cgatatccga cgaccagcgc
     2881 gacggcacga catgtttacc gtcgcgggac accagatcta acgcctgcgg gcgcaatagc
     2941 tgcgcctggc tccagcgcgt tttcggcaac tgcaagaaaa tatccacatc aagcccggtc
     3001 tgatgactgg cgtgtccgcc attaaagcgg cctccggcag gcatccccat gtcgcctatc
     3061 aggacggttc cgagcccccg ttgctgcgcc tgatgactca accgctggat aaacatgacc
     3121 agatccgggt ggccgaaata acggcgctga tcggtgcgca tcacctgata attatcggac
     3181 tgtaccggca acgtgtcggc gccaatgatg catccgttgg caaagctacc gatagactgg
     3241 gcggcgccgg ggacaggatg ggttattttc tgccacggcg tcgccgccag gctggcgcta
     3301 ctgacaaacc atgccagcag cgcaatcgcg gtttttttca tttcttacca gcgtggaatc
     3361 tctgtcttta catccgcatt ctgtgcccga tggcgcagca ggtgatccat cagtacgatc
     3421 gccagcatgg cttctgcgat cggcactgcg cgaatcccca cacacggatc gtggcgccct
     3481 ttggtgatca tctcgacctc ttcacccatc cggttgatcg tacgtcccgg cacggtaatg
     3541 ctggaggtag gtttcagcgc catatgcgcc acaatgtgtt gcccactact gatgccaccg
     3601 aggatgccgc cagcgtggtt gctctgaaaa ccctgcgccg tgatttcatc gcgattctgg
     3661 ctgccgcgca gcgccaccac gttaaatcct tcgccgatct ccacgccttt caccgcattg
     3721 atgctcatca gcgcatgggc gatgtccgca tccagtcggt caaataccgg ttcgccaagc
     3781 cctgccggca cgccgctcgc catcaccgtc actttcgcgc cgatggagtc accctctttt
     3841 ttcagcgcgc gcatcagttc gtccagcgcg tcaagtttgt ccgcatcggg gcaaaagaac
     3901 ggattaagct caacctgacg ccagtcttta atctccagcg gaatgtcgcc catctgggtc
     3961 aggcagccgc ggatttcgat gccgaacttt tccgccaagt atttcttggc gatcgcccct
     4021 gccgctacgc gcatcgcggt ttcacgcgcg gaagaacgtc caccgccgcg gtaatcgcgc
     4081 aggccgtatt tctgctcata ggtgtaatcc gcgtgtcccg ggcgaaaaac atctttaatc
     4141 gcgctgtagt cctgcgagcg ctgatcggtg ttttcaatca gcaggccaat actggtgccg
     4201 gtcgtcacgc catcaaacac gccggagaga atttttacct ggtccggttc gcggcgctga
     4261 gtagtatagc gcgaggtgcc agggcggcgt ctgtcgagat cgtgctgcag atcggcctcc
     4321 gtcaacggga tgccgggcgg cacgccatcg acgatacccc caagcgccag cccgtgtgat
     4381 tcgccgaaag tggttacgcg aaagagttgt ccaattgtgt ttcctgccat cacggctccg
     4441 ttatcgttgt tgtcgtttgc gtgttttaat ctttataaat attgaaatgt tcacgggccg
     4501 cgagcaactg cgctttggtc aacataaaga cgccatcgcc gccgttgtca aactccagcc
     4561 aggtgaacgg cacatccgga tactgctcca tcagatgtac catgctgttt ccgacttcac
     4621 aaatcagaac gccatcatcg gacagataat ccggcgcatt tcccaggata cggcgggtca
     4681 atttgaggcc gtcagtgccg gacgccagcc ccagctcagg ttcgtggcga tattcgttcg
     4741 gcagatcgga catatcctcc gcatcgacat aaggcgggtt agtgacaatc agatcgtact
     4801 gaactttcgg cagatcgcgg aacagatcgg aacggattgg cgtcacgtga tggataagac
     4861 cgtgttcttc aatgttatgc tcggcgacag ccagcgcatc cggcgaaata tcgaccgcat
     4921 caacctctgc gtccgggaaa gcataagcac aggcgatggc gatgcagccg ctgccggtac
     4981 acatatccag aatatatttc ggctgttggc taataaggcc agcgaagtgg ttattaatca
     5041 gctcgccaat cggtgaacgc ggcaccagca cgcgctcatc aacataaaat tcgtggccgc
     5101 agaaccaggc tttattggtc aggtaggcta ccgggatacg ctcgttaatg cgacgaatca
     5161 ctcgctcgac aatgcggtgt ttttcgctgg acgtcagccg cgcggtccgc atatcctccg
     5221 gaatatccag cggcagataa agagacggca acaccagttg taccgcttca tcccacgggt
     5281 tatcggtacc gtgtccatac cagatattcg ccgcgctaaa gcggcttacc gcccagcgca
     5341 acatgtcctg aatggtatgc agttcactta ctgcttcatc gacgaaaatt ttatccacgt
     5401 attcctccag ggcatgctcg cattaaattc ggcggctagt ttgccacgaa gacagggata
     5461 aatcagcatt gacgcggcgg gagaatacga aaaatccgtt ttgaccgttc ggatatcctc
     5521 cgggtcgggt aaactaaggc aaaagatcag acgagaccca cgaatgaaaa agaaaacatc
     5581 gctcagcgag gaggaccagg cgctgttccg tcagctgatg gtcggcaccc gaaagattaa
     5641 acaggatact atcgtccatc ggccactgcg caagaaaatc acggaagtcc ctacccgaag
     5701 gttaattcag gaacaggcgg acgccagcca ctatttttct gatgagttcc agccgctgct
     5761 caatacggaa gggccggtaa agtatgtccg tgaagatgtc agccatttcg agctaaaaaa
     5821 aatgcgccgc ggcgactatt cgccagaact gtttctggat ttacacggct taacgcagct
     5881 tcaggccaag caggaactgg gggcgctgat tgccgcctgc cgtcgggaac atattttttg
     5941 cgcctgcgtc atgcatggac acggtaaaca tattctgaaa cagcaaacgc cgttatggct
     6001 ggcgcagcat ccgcatgtga tggcctttca tcaggcgccg aaagagtacg gcggcgacgc
     6061 cgcgctgctg gtgttgattg aagtggaaga gtggcaaccg cccgaattac cctgatgcgg
     6121 aattgccgga tggcggcgca agcgccttat caggcagcaa agattaaatc gctttcgcca
     6181 ttttcagatt gcagggactc atttgccagt tgaatgtccc cttgccgctt tcatcaagcg
     6241 taacgttggc aattgcggac gtcgtgaaca tcggcggcgt ttcgcccgga caaagctcag
     6301 ataccaggta tccgaccaga ggtaagtgag agatcaccag caccgatccg atctcttcat
     6361 tggccagcgc ctgaaggtag gcgctgacca gaccgacatc gccacagggc gttagctccg
     6421 gcaggacatc cacctgagtc ggcagattca tacaatcgcc gaccacatct aacgtctgtt
     6481 cggcccgaag aaacggactc accagaacac gttcgatatc cactttttga cctttcagcc
     6541 agttcgccat caggcgagac tcgtcacacc cacaagaggt caagggacga accgaatcac
     6601 tggcggcatc gagggctgcg tcgccgtgac gcatgataaa aacttgcata ttgcaccgct
     6661 tttgttaacc agtttcacca acacgcttac cacatgcccc tattggctgc ggcaaaaatg
     6721 cggtggccgg cattgtgcct tatccattca ccgaatgaaa cgctgttttt tacctcaatg
     6781 gcgtaagtat agtcaatcct tgattattat ttcgccacta aggaggcatt cagtgcggat
     6841 tcatattctc tttgacctca atttccctgg tcagtttccc cattcgtcca gaaatgctcc
     6901 ctgcgctccg ccatgcgcac taattgttca caaggcgcgt aacgaggacc gtaaagtgcg
     6961 gccaggcgct gtaatgtcgc caccatttca cccggcccga gagcatccat atagcggaac
     7021 gggccaccga gaaacggcgg aaaaccgata ccaaacacgg cgccgatatc gccatcgcgc
     7081 gcgctgcgaa tcactttttc gtcgaaacag cgcgccgctt cgttaagcat taacatgaca
     7141 cagcgctctg ccacctgctg cgcagacagt cgactctgcc cttgcacgcc aataagctta
     7201 taaatagcag ggtcaacctg ttttttgctt ttacgccctt tttcgccata aagatagaaa
     7261 ccgcgaccat tttttctacc tttgcgatcg tcattcaaaa ttgaagcgac aacatttgca
     7321 ggcgcgctaa aacgttctcc atacgccgcc tcaagcacag gaataatttt agtgcccgtg
     7381 tcgattccta cctcatccaa aagttggatt ggccccaccg gaaaaccaaa ttttaccagg
     7441 gcggcgtcaa tatgttcgac gcgttcgcct tcagtcagca tccgaatcgc ctcattgata
     7501 tatggcgcaa gaattcggtt aacataaaac ccggctttat cactgacgac tatcggggtt
     7561 ttaccctgtt ttttcgccag cttaacggtc gtggcgatgg tctgcgcgga agtagacgcg
     7621 tgaggaatga cctcaaccag cggcattttt tcgaccgggc taaaaaagtg caatccaatc
     7681 acctgttccg gtctggccgc attcgccgca atatcgccaa tcggcaggga agaagtattg
     7741 gaggcaaaaa tggtgtgagt agcgcaattt tgctccactt ccgccaccat ctgttgtttt
     7801 aacggcagat cttcaaacac cgcttcaatg accagatcac gatgactgaa accacggtaa
     7861 tcggtcgaac ctgatatcaa cgccaactgt ttatcgcgtt cgctggcttt gatatggcgg
     7921 cggcgtactt ttgtttcaag cagatcccag ctgtatttca gagcatgatt gatcccctga
     7981 gtatttatat ccttaattcg tactggcaaa ccgcctttac aggccgtaac ccaggcgata
     8041 ccgccgccca ttaacccgcc gcctaagatg cccacgctgt tcagcgggcc gggcggtgca
     8101 tcgctaccgg gatctttttt cacctcggta ctggcaaaaa aaacagcgcg cagcgcctgc
     8161 gattgcggcg tcatcgccag ctcgccgaaa gcgcgcgctt ccgcgtcata gccgctactg
     8221 ctgccctgcg ccagtccggt ttcaatcaca tcaatgatcc gctccgtcgc cggataatta
     8281 ccctgcgttt tttgcgccgt ctttttacgc accaggcgaa ataacagcgc gcgccccagc
     8341 ggccccgcca ggatacgttc acggaccggt aaagtccgct gcgccaggcg ttctttttta
     8401 gccagctcga cagccgcttc cagtaaaata gtttgcggca ccacatcatc aaccagcccg
     8461 gctttaagcg cctgtctggc gcgaagctgt ttacctgtca ggatcatatc cagcgcggta
     8521 ctgaccccca ccagccgcgg aagacgctgc gttccgcccg atcccggtaa aagccctaac
     8581 tgtacctccg gcagtccgag aacggtttta acgtcatcgg tacagatacg ccgatggcag
     8641 gccagcgcca tttcaagacc gccccccaga caggcgccgt gaatggcggc gataaccgga
     8701 acaggcaacg cctggatctc cgccatcagt tgttgcccct gacgcgccag cgtttccgct
     8761 tcctgcgcgt tttggcagtg gcctatcatg ttgatatcag cgccagcaat aaagttatct
     8821 gctttggctg agataaaaac aacgccctgc aacgctttat tttcccggat ctgcttcagg
     8881 atggcgcgta cctgcgcggc aaactccgct ttcagggtgt tcaccttttc tccagggaca
     8941 tcaatagcga caaccgcgac attatccaga cgcacgctaa gcataaaagc tgatgtggta
     9001 gtcattattc cgcctccaga accatcgccg cgccaagacc gccagccgcg caggccgtga
     9061 ccaggccaaa acctccgccc cgacgccgta attcatgcaa cgtttgggtt atcatccgcg
     9121 cgcccgttgc ggcaaaagga tgcccgtagg cgattgagcc gccgagcacg ttgaatttag
     9181 cgtcatccac ctcccctgtc gcctgcgcac gaccaaacac ctcacgggca aatcgttcgc
     9241 tgcccagcag ttgtaagttc gccagagtct gagcggcaaa cgcttcatgc atgtcaaaaa
     9301 gcgtcagatc ggccatcgtc aacccggccc gctccagcgc cagcggcgtt gaccaggccg
     9361 gccccaatag catgtcctgc cagacatcaa tagcggtaaa ggcgtagctg cgcagataac
     9421 caagcgggcg cagccccagc tctttagcgc gggattcggt catcagaata acggcggcag
     9481 cgccgtcggt cagcggtgta ctgttggcgg cggttacgga gccatgtttt cggtcaaaag
     9541 cgggacgcag tttagcgtag tccgccagcg tggaggcacc gcgaatgttg ttgtcttctg
     9601 caaaggggtt tttatacggc ggcacatagg tcgtcatcac ttcttccgcc agtttaccct
     9661 ccgcccatgc ctgcgcggcg cgctgatgtg aacgatgcgc cagcgcgtcc tgctgttcac
     9721 gcgtaatacc atacgttttc gccatctgtt cggcggtatc gcccatgcgc agaccggtgg
     9781 aatactcagc aacggcggga ggaacgggca gcaggtcgcg taagcgcaga cgagaaaaaa
     9841 gcgtcagccg ttggcgggtc gtccgggctt tattgacatc aaccagtacc cgcgccaggg
     9901 ctttactcac gcctattggc agtaccgacg acgaatctgc gccgccagcg atacccgcgc
     9961 gtatcgtgcc ggccatcagg ctttccgcca cattcgctac cgcctgaaaa ctggtggcgc
    10021 aggcgcggct tacgctatag gcatcggtat gaacattcat tcccgtaccc agcacaattt
    10081 cgcgcgcaat attgggggct tccggcattt gtactacctg accaaaaacc agttgctcaa
    10141 tggcatcggc tggaatttca ctgcgcgcca gcagctcgcc taccaccatc ttgccgagat
    10201 caacagcggg aataccatga aatgcagtgg cctgacgagc gaagggggtt cgtaacccac
    10261 tgacaatagc aatgcgatcg ccctgacggg tgaccaacgg taaagcctga cgcatagtac
    10321 tcccctgtaa aaaaataaat tagtggtctg acctgatcac agtcttaacc aattttttac
    10381 atttagccaa gcagagagaa aagaaagtgg gagctaaggc acagtgaagg gaaacgacaa
    10441 aaaaagaaaa cgcctccgcc agatgatgac ggaggcgtcg tgaatgaacg gattaacgca
    10501 ggccgagctg gaagatcagc gtttctgctt cgcaggcgaa aacaaaatca atatccagac
    10561 gaacgccttc ggattcctcg gtaaaggttg gcgtaatttg gcaaggttca gactccacgc
    10621 tacgcgcttt ttcggttaac gccgccagcg tctcttcagc ctctgcgcgg gtagcgaata
    10681 cgcggctgta tgacgcggtg caatcggagt tgtccatgat ggttccaacg tccatacagc
    10741 agcaaaccgg ggtttcatca gcactgcatt tactcattgt agatttcctc tgtatttgca
    10801 cccagggtgc cagataaacg atggggatat tttacgctcc cggcattcgc ctctccagtc
    10861 gttaatggtg ggaaacgcgt taagtgaccg aaatcacact taaaaatgat ctaaaacaaa
    10921 aatcacgcga tcgggtgacc gttaagcccg ccgattttac cagccagatc tcgtttctaa
    10981 gatcacaatt gaaaaaactt ataaacatac ttgcaacatt ctagctggtc agacctatac
    11041 tctcgccact ggtctgattt ctaagtcgta ccgcagaccc tacacttcgc gctcctgtta
    11101 cagcatgtaa catagtttgt ataaaaataa tcaatgaggt tatggtcatg agccagaaaa
    11161 ccctgtttac aaagtctgct ctcgcagtcg cagtggcaat catctccacc caggcctggt
    11221 ctgcgggctt tcagttaaac gaattttctt cctctggcct tggccgggcc tattcgggtg
    11281 aaggcgcaat cgcagatgat gcgggtaacg ttagccgcaa cccggcgtta attaccatgt
    11341 ttgaccgccc gacgttttca gcgggcgcag tttatattga tcctgatgtt aatattagcg
    11401 ggacatcgcc atctcgtcgg acgttagatg cggataacat cgcgccgacg gcctgggtgc
    11461 cgaacgtcca ttttgtcgcc ccgattaacg accagtttgg ctggggggct tctattacct
    11521 ctaactatgg tctggcgaca gagtttaacg acacatacgc cggcggctcg gttggcggta
    11581 cgaccgatct tgaaaccatg aacctgaatt taagcggcgc ttatcgctta aatgaggcct
    11641 ggagcttcgg cctcggcttt gatgcggtat acgcgcgcgc gaaaatcgaa cgttttgcgg
    11701 gcgatttagg ccagttggtc gcggcacaga atccggcgct ggcgccggtc gcgggtcaga
    11761 ttctcagcga caccaagatt gcccacctga acggtaatca gtggggcttt ggctggaatg
    11821 ccggtatcct ttatgaactg gataaaaata accgctacgc gctgacctac cgctcggaag
    11881 tcaaaattga ctttaaaggc aactacagta gcgatcttcc catcgctata aaccgattta
    11941 acctgcctat cccaacggca accggcggcg cgacgcagtc aggctacctg acgctgaatc
    12001 tgccggaaat gtgggaagtg tccggttata accgtgtggc gccacagtgg gccatccact
    12061 atagcctggc ctataccagc tggagtcagt tccaggaatt gaaggcaaaa tcgaccgccg
    12121 gcgatacgct ctttgagaag catgaaggct ttaaagacgc ttatcgcatt gcgttgggta
    12181 ccacctatta ctacgatgac aactggacgt tccgtaccgg tatcgccttc gatgacagcc
    12241 cggtaccagc gcaaaaccgt tctatctcta ttccggatca ggaccgtttc tggctgagcg
    12301 ccggtacgac ttacgccttt aacaaagatg cgtctgtcga cgttggcgtc tcttatatgc
    12361 atggtcagag cgtgaaaatt aatgaaggcc cttatcagtt tgaatctgaa gggaaagcct
    12421 ggctgttcgg tactaacttt aactacgcgt tctaatctct ttctgaaacg gatcaaaaag
    12481 gtgagcattg cgctcacctt tttatttact gccgtttatt ccgagtcgat ctctttgagt
    12541 tcgtcctgaa tcgcttgcgc gttcgggttt tcctgcggct tgagttttcc gccattggcg
    12601 ataaagtcat gacgctggaa gtatgcctcg cgcaccataa tataaggatc ggaagactgg
    12661 cgcagcaaac catcggagtc cagcaactgc gcgcgggttt ctatcccttc gatagtccat
    12721 tttcctatgg acattggcca ggtcaaccac gagagcaccg gatacaaggt atccgccata
    12781 tccccgccat cttcacgcag cgtgaagctg ccgtagaacg gaagttgcat ataaggccca
    12841 taccccacgc cataatggcc cagtgtactg ccaaagcgat gcggttcaac gcgctgcagc
    12901 ttaggattcg ccattcccgc gacgtcaata aagccgccca tccctaataa ggtattcagg
    12961 aagaaacggg tgaaatgcac cataccctga taaggatcgc cctgcaggaa atagttcacc
    13021 atgatcgccg gttcttcgag gttgccggtg aaattactta aaccgttacg cgcaggctgt
    13081 ggaacataat cacgccaggc gaccgcgacc ggccgaacaa catacgggtc cagcacatta
    13141 aagttgaagt tgtacatggt gcggttaaac ccttcaaatg ggtctgaacg cccctgctgt
    13201 tctgtaccgg aactcgcaca cccgaccagc agtgtggttc ccagcgccag cgccgacagg
    13261 cgaagcttca tagatgtctc cctgtgaatt atggctatcg ctgattgcca tccatgacgg
    13321 aacgctaccg tatccgcctg tttaggtgtg agcgatttta acagcacgtc aaacgatgtc
    13381 tatatgcgcg atctcattgc tctgagcata gcctggtaac gcaacaacat gacggcccta
    13441 ttctaacgaa acagataaaa acgagcgtga ttatttttat tttttcggag aatgccccgg
    13501 cctgggtaaa tgaaaaaccg ctacgcttta ttaatatgtg ttaatcagca aggatcatca
    13561 tggatagcct taacgacgat aaaattaacc ggcacagcag tgacctggaa gttgaaagcg
    13621 aagaaaaaca aagcggtaaa gagattgaag tagatgaaga tcgtcttcct tcccgcgcca
    13681 tggcgattca tgaacatatt cgccaggatg gtgaaaaaga gatggaacgc gatgcgatgg
    13741 ctttgctctg gtcagccatt gccgcaggac tttctatggg ggcatcactc ctggcgaaag
    13801 ggattttcca cgtgcagctt gaaggcgttc ccggcggctt tttactggaa aatctcggtt
    13861 atacctttgg ttttatcatt gtcatcatgg cccgccagca attatttact gaaaataccg
    13921 ttaccgccgt attgccggta atgcaaaatc ccacgctgag taacgttggc ctgctgatgc
    13981 gcttatgggg cgtagtctta ttgggcaacc ttattggcac cggggttgcg gcgtgggctt
    14041 ttgaatatat gcctatattt gatgaagaga cccgcgatgc ctttgtcaaa attggtatgg
    14101 aggtcatgaa aaatagccca acggagatgt ttgccaacgc gattatctct ggctggatca
    14161 tcgccacaat ggtatggatg tttcctgctg caggcggggc aaaaattgtg gtcattattt
    14221 tgatgacctg gcttatcgcg ctgggcgata ccacccatat tgtcgtcggt tccgttgaaa
    14281 ttttgtattt ggttttcaac ggcacgctgc cctggagcga ctttttctgg cccttcgccc
    14341 ttcccacact tgccggaaat atctgcggcg gcacctttat tttcgcattg atgagccacg
    14401 cgcagatccg caacgatatg agcaataagc gtaaggaaga agcgaggcta cgcggcgagc
    14461 gcctggaacg ggagcggaaa aaagcggaaa aacagcgctg agtggcgacg gtttaaccag
    14521 tcaggcggcg ctacacttac tccggcgaat aaaaaacgct atactggcgc cgcgttgtcc
    14581 ccttagttaa atggatataa cgagcccctc ctaagggcta gttgcaggtt cgattcctgc
    14641 aggggacacc atgacctctt ttacccacct ctcacgaatc tcagcaaacc cacaccacac
    14701 aaggcgttgc agcgtttttg atgtcttatg atctccagcg aatagtgcct ataaacataa
    14761 cgaaaagcat ccctttaaag tcccctctcg ctgttagaac ttaaccaaaa gttagcacct
    14821 tcactttccg acagatatag gcccagaact tcttttttgc cttctagatt cagtgccaga
    14881 acggtataaa ccgccttgct ctgataacgg ccatcctcac ggtttttata atgaatagcg
    14941 tccagccaga cgacgggata aaccttctcc agcgggctct gttgccactg ttttagttca
    15001 gggatgactt tatcggtact gcactgacgg tggcggttga aacgctgaag gcataaagat
    15061 cttcactctc ccggccgatg tcctgataac tcatctccag cgcaaacagt cgaatgatat
    15121 tgcgctcgat ctcgtcgtac agggggtctg aagcttcttc accaattatg gctcaaaagt
    15181 gccgttacga ttgcgcggag ttgccagttc aaaactgcct gttggggctt taatggcttt
    15241 ttgccggaac catttttacg gtttgcctca acatcctgag ccagatggga atcaagttca
    15301 gcagacaggg tagagtcggt taaatacttg attaatggcg ttaagatgcc atctttgccc
    15361 gttaatgcct ggccggacct gaagggcttt aagtgctttg tcgaaatcga agggatggga
    15421 catgtgccat tcttttttat tttatgttac taaaattata cagaattttt aacgctcccc
    15481 ctctccccag cacttccacc ctttcaagta cctctctctg aaaaaacatg caaagccttg
    15541 taagacgatg taaagcttta catgtcccgt ttttattcca agacgcttgg caatcagcaa
    15601 taccaattga tcgataacat agatcaatat attaaaactc aatagcttaa aactattaaa
    15661 aatacaatta ttgatcgctt atatcgatca aaccaatttg tagtgctaca ctccagacct
    15721 ttctgaatcg gctaattttc ataatgttga agttattcgc taagtacaca tcgatcggtg
    15781 ttcttaacac gctcattcat tggggagtat ttgctttctg tatgtatggg atgcatacgc
    15841 atcaggcgct gacgaacttt tccgattttg ttatcgctgt atcgttcagc ttctatgcta
    15901 atgcgcgctt cacctttaat gccagcacta ctgcaattct ctacatgatg tatatgggat
    15961 tcatgggaac actgagcgct gttgttggat ggatggctga ccaatgttct ttgccaccat
    16021 tggttaccct catcactttc tcggcaatta gcctggtatg cggctttatc tattccagat
    16081 tcattatctt cagggataaa aatgaaaatc tctcttgtcg tcctggtttt taacgaagaa
    16141 gacacgatac cgattttcta tagaacggta catgagttta atgaacttga aaaatataaa
    16201 gttgagatta tttttattaa tgacggaagt aaagatgtga cggagtcaat aattaaaata
    16261 atagccgtat ctgatccact cgtcattccg ttttcgttta cacgaaactt cgggaatgat
    16321 gcaagatgca caaccatttt attaatcttt ttttaaattg aggtaattta agttggaaca
    16381 cttaaaatac agacctgata tagatggatt acgcgcaata gcggttttat ctgtggtaat
    16441 attccattat ttcccatcat tattgccggg tgggtttgtt ggagtagata tattctttgt
    16501 gatatctgga taccttataa catcaataat attaaaatct gcatcaaaca aatcattttc
    16561 ataccttgat ttctataaaa ggagagtgct tagaatattt ccagcattat ccatagttct
    16621 tgtatcatgt cttattgttg gttggattta tttattccag gatgattaca aattacttgg
    16681 taagcatgtt tttagtggct cattctttat atcaaacttt actctttgga gtgagtctgg
    16741 ctattttgat tcaaaatcat accttaaacc tttactacat ttgtggtcgc tgggaattga
    16801 agagcaattt tatataatat ggccagtagt tatattgcta tgctttagaa gcaaaaacca
    16861 taacagaaac atagtattat catgcgcaac tatatttata attagctatg cgattagcat
    16921 ttttacaatg gcatctgatg gcggagctaa ttactactct cccgcatcaa gattttggga
    16981 gttaatggct ggagcgatta tatccacatt gagatttata ggaataaaca cttcgttatc
    17041 aaaattaatg tccctgttag gaattatact aatcgcatta tcaataacca tgatagatga
    17101 aaagatgtca tttcctggat atatagcaat aatcccaata cttggcgcct ctcttataat
    17161 agcatctaat ggtaatgatt tagttgtgtc gaaattgctt agtgttaggc ctgttgtttt
    17221 ctttggtctt attagctatc ctctttattt gtggcattgg cctatttatt cattctatcg
    17281 ttcaatattt gctggctcac cagactacca tgaattaact cttcttttat tattatcgtt
    17341 ctttttggcg atattaactt attatttaat tgaaaaacca ctgagaaatt ccagaagtaa
    17401 atatatcaca gcaatattat tagcattatc tgtatttggg acgggtttaa ttggcgcatt
    17461 tatttttcat ataaatggag ttaaagacag ggaaatcaat aaatcagcaa gtgaatatgc
    17521 ttctgttact gacgtgtaca attattataa atatggagaa ctactccgtg gagggatatg
    17581 tcactcagta caacttactg ctgccatatc caatggatgt ataaaaaatg gcaagcataa
    17641 tatatttatc attggtgatt cttatgcggc ggctcttttc aatgggcttt ctcattatat
    17701 agataataaa ggttctgatt atataataag ccaaatgaca gatggtaatg ctcctcctct
    17761 atttgttgac ggtaaagatg atttacagag aagtgtcatc actctaaaca ataatagaat
    17821 taatgaaatt aaacgtgttc agcctgaggt ggttctgctg acatggtcag ttcgaggaac
    17881 aaatggagta catgataaaa agttagcaat tgatgcgtta tcattaacca ttaaaaaaat
    17941 taaagaggca tcccctgact caaggattgt tttcattgga ccagtcccgg aatggaatgc
    18001 aaatttagtt aaaataatat ctaactacct gagtgagttt aaaaaaactc caccattgta
    18061 tatgacatat ggattaaata gtgaaataag cgagtgggac tcttacttta gtaacaatgt
    18121 tccaaaaatg ggaattgaat atatatcagc atacaaagca ttatgtaacg aaagtggatg
    18181 tcttacaaga gttggtaatg gtcctgattt tatcactgcc gttgattggg gacatttaac
    18241 aaagcctggt tctgatttcc tttttaataa aattggaaat aaaataatca aatagatagg
    18301 ctgttactat tacatataaa tccaatatgg aacatgccag tcatactgtg taactgccac
    18361 tatattaacg gtgatcgctc aggcggtcac cgaactcgat aataaagcga atcattgcca
    18421 gcgaccagtc ctggatcggc atactccatt ttttgacgcc cctttgacca actcttttac
    18481 tgcggcggtg atcttaagta tcagcatggg cgacacatca gcgtcgtaca tctctttgaa
    18541 ggtggcgatg atttcgcggg tagtcatgtc atgcctttgg cataaaggga taaatctgac
    18601 tttccatctc gtaatacgcg tctgatgctc cttaatcagc tacagttcaa aggtattttc
    18661 acggccacgc agcatgttca gcactatctc gccgccatca tacagcaccg tttttaatga
    18721 gtagccattg tgggagtttg agctcgtttt aggagcattt ttctcatgcc cgagatggtc
    18781 agccagctca gcattgagcg ccgtttcgac ggttaatttc gtcagcatat ggaaaaactg
    18841 actgaggtcg gcttcagttt taagaccttt agccagttca gccgcaagag ctgtgagttt
    18901 cttttcgtcc ataattgcct ttctcctttg ctggagtgaa tatataataa tcagataatt
    18961 acataatttt taattacaat ctcccaatac ttatattata cccccatatt cattacacgt
    19021 tcaaagtgtt gttaacgtta atctaactaa ttatccatta ggtatttccc ctaaagacct
    19081 taacgaagcc gaattatttt tgcatgtgac acaaaacatg agtaatcttt tataaattta
    19141 tctgacacga tattaggact aatgacatct cagctaccat acaatcttta tagttaactg
    19201 ttgaggatgc ggggtctgac agattaccag atggtgtttg ttttatgtca atgagtctca
    19261 aaccattaat aatgcaacca ctttctacaa acaattagtt agtgttaaag ttttagtatc
    19321 gattacagaa atatatgtga atgtcttccc atatgtgtac catagaccac cagaccctgc
    19381 gcaatcttgc ataagaatgt tcgatacata acttccccag ccatccatac caagaccaac
    19441 actctatgaa ccaatggcaa cgagaccatc gactaaatga tttgttggta gttggtgtac
    19501 cggatattct gatagcgaat agtcgcctgg tctatctttt tcatttccga tatctgccca
    19561 aaggttgaag cagtcccaca aagagtatat ggaaagtaac tttctgaatt gaagtttata
    19621 acatctggat gaggtccccc tctactgttc cttgccacgt cttaacgcca aactcgccag
    19681 atctatatga ggtaaacaca atatcaccgg gcatgccaca cgttcagcaa aaagtcgtca
    19741 tcggccggtt atgaccgatg acatcccgat gtggtctaga agcggtactg caaccccgcg
    19801 gtaaccgtat agttattatt agctatacct gcggcatcgc caccaaaata cgccgtatta
    19861 ccgctggttt tatctatgat ttgcgtaccg cccttacctt cttcatattt actgtaagcg
    19921 aactcagcaa agatttttgc attactggta atataatatc cggcgtcaat agacgcgcca
    19981 taatatcgtg aattttccgt tttttcacgg aaggtaagtt ttcgcatgta gtgttcgtca
    20041 ttatcatgcg catttaccca gtcgctgtat ttaaacagta cattacactc aaagtcatta
    20101 atacgataat cacccgccag cccgatatag ggcatttcga aacgctggct ataacctata
    20161 ccgcgcacgc catgaggaaa gttaccaata tatcgaccat tatcataaat ataagacccg
    20221 cctcttgccg tccagctaaa acgagtttcc tgatagcccg ctgttacgcc cgccttgtag
    20281 ttatctccct gcaataacca acctttcacg ttcaaatcgt attcattagc atagttggcg
    20341 ctggtgtccg gatgaattga acgatcggtc cagcctggct gctcactgct catccagtca
    20401 tggtcaacca tatgacccga tcccgacgcc aaagacgtcc agccgcgggc gtccagcgtc
    20461 atgaacgaat agggttccca tgataaatcc ccctgcaacg tggcgacatt ttttattttc
    20521 cagtccagtt gactcagctt ccgtccggtg tcggtatcat aaaccagctc cctggattta
    20581 ccgtttaaca cccccacaga aagggatgtc gtgacgctct caggagagac gtccggaata
    20641 aataaggtag actccgcata aaccgactca gaaaatacgg cgatcatcat tactgcaata
    20701 gcatgttttt tcatttctct tgtcctcata ttcagatgta atctggagag gtgatgaagt
    20761 tttcatcttg tcaaatcgtc ggacaagagt acatttatta cgccagagaa cttgacgcat
    20821 ttttacctta tattgaagtt aagaaataga atttgatgct caggtgaata ataagcaatc
    20881 tataatcata atggaatgat ttaccattac ggtaatgcga cgttatctgg ctaacgacat
    20941 cgttgctgtt gttgtcagcc agattgaaag taactgtaat atcagaattt ataatgctct
    21001 ttacttagac catatttttt catgcgcaga taaagttttt tacggggaat ttgcaagtac
    21061 tccgccactt cattaattcg tccctgatga atatttaatg cttcggtaat aatttgtcgc
    21121 tcatactctt caacgcgccg gtcaagcggg gtcggctcct gcagaagcaa ctgcgggttg
    21181 accgtttccg ccagcggcag cacgccgaca gcaaaaagct ccgccgcatt ggccagttcg
    21241 cgcacattgc ttggccaggc gcgtcgcatt attcctttca gtaattcccc cgctatttcc
    21301 ggcactggat gattgagtcg caggcaggct tttcgaagat aatggcgaaa taacggctcg
    21361 atatcatccg gtcgctgaga aagagactgg caggcgattt gggtcatggc gaaacagtag
    21421 taaagctcgg ccgctatctg gttagctgcc gcctgctcca ccagcgaagc gctgccaacg
    21481 cccaccaaac gaaaaggccg atgctccagg ctttgtaaac gcgccagatg gtgctgctgt
    21541 tcgcgtgtca gatattcggg ataactcaac accagcgtgc ctccttgcgc ctggtcgatg
    21601 aatgtctcca actgcccggc attctccggc gtgagttcat agcgaacaaa cggccctttc
    21661 gcgttacgcc ccagctgatg gagataacgg gcgccagtca tacgtcctgt gtcatgctca
    21721 ccgtaaaacc atacggcaat gtccgtttcc gccagttgtt gtaaccgttg tcgaaactga
    21781 ttcatccact cgctgcgccc aatcaggtca acctgtaacg tctgctggca atattgccgc
    21841 cgtgcaataa ccgaccggcg ctggcgtagc gcgtcttcaa ttaatatcaa cagtttgccc
    21901 ggatcgacgg gtttttgcag aaaatcccag gcgccctttt tcaccgcatc aaccgccatc
    21961 ggtacatcgc catgtccggt aatcaataag attggcagtt gatcgtcatc ctgatgaaac
    22021 agcgtcataa gatcgatacc ggaacacccc ggcatacaca catcgctcaa aacgatcccc
    22081 tcccaatccg cttttaccca ctctttggcc tcgaaaggat gggtaaagcc acgcacgcgg
    22141 tagcctgcct gctcaagcat ttgggtatag gcgtcaagta catcaacgtc atcatcaatc
    22201 agcaaaatag aacattcatc attcaacatc atcgacatcc gttaccgaga attgcagcac
    22261 cacgcaagca ttacgcgtca gcgtcgacgc cagacgcagg tcgcccttca tttgcgccat
    22321 cagcgacacg ctaatcgaca gcccaatacc caacccgaca gctttactgg tggtaaacgg
    22381 cttgagtaaa gagggcaaca gcgccccagg ccagccaggg ccgttatctg caatataaac
    22441 ctccagcgcc tctccctgcg tctgccatgt caccgcgatc gccgcatcat gcgaacaggc
    22501 gtcaagcgca ttcgccagca cattcaccag aacctgctga atacgcactt catcgccgct
    22561 aacccatacg gtgtcggttg gcagtgaaag cgctccctgc cgggattggt ggcgcatggc
    22621 taataactcc catgccgcca cgaaggtttg gcgcagatca acgggataca atggcgtttc
    22681 cagctccgcc cgacgggtaa actgccgcag cgaacggata atggcgtcaa tccggttaat
    22741 gagcccttcc gctttggtga gcgtatttct cgcctgtccg ctctgacctt gttcaatcgc
    22801 gcgtcccgcc gtaaataaat acattgaaag cgcattcagc ggctggttaa tttcatgcgc
    22861 cagcgtggtc atggtctggc cgactaccgc cagtttcgcc gtctgaatca actcatcctg
    22921 catggcgcgc aggtcggctt ctatctcttt gcgctcggcg acctcttgtt caagctgcct
    22981 gcgttgcata ttgagctggc ccagcgtatg acgtagcaag cgggctatcc gtcctagctc
    23041 atcgcgcccg taaaccggga tagtcgagtc ggttctcccc agccctatct gtaccacagc
    23101 ctgattaagc gcggtaaaac gcttcaccag tcgggaacgg ataaaatagt ggttgagtcc
    23161 ccaggccagt agcaacgcca ggagcgtcgt cactaaaata agcccgccgc taacgcgaac
    23221 aatctgttcc aggcgttgat tgaacgtctg catttgctgg tgactactac ctaactgcgc
    23281 ctcaagcagc gtgcgaaagc gccctagcgt agcctctctg gcgcggctgg cgtccagtaa
    23341 ggctttttgc gccgcaacat aatcgcgcat ggtatcgggc atcttatttt ttaccatccc
    23401 gatttccaat agttcgtcga tggtttgccg cagcgtgatc gtactgggcc agtcatcgag
    23461 cgcacgaata ttctcatccg ccgttttttt taggttttcc agatagcgaa tatgggtctc
    23521 caccagcatc ccgtcattat tgccggactt gagctcattc aatctgtcgc gcaggtcatc
    23581 aacaatctga ttttcaattc gcgccagggt atatacctgc tgctgctcgt tctgcacctc
    23641 gcgcgaacgt tgcaagtact gagccgcgtc gccctgattc gcctcaattt gatcgagcag
    23701 cgtcccttgc tgccaggtaa aatcctgtac cagcgaattt agctccgtgg tgaaatcatc
    23761 atggagccag tcgatgcgag cggaaagctc actaactttc tcccgcacca aaaacatgtt
    23821 gtagagggcg ttgtccagct ccgccagcaa ggtccggcta tcctgtaaaa tgacggccag
    23881 ttgccggcgc tcagcaagct gaagcccctg actgagacgc tcaatcttat ccagatgctg
    23941 aataatctgc gtacgtaact gcaaacgtac cgtcgtgttc ggcgccagca aaaattcatt
    24001 gagttgatcc acggccagat tcaggttccc ctcaattaaa aaagcggagt ggatgcgagg
    24061 aaaatattca tcaagcgaat agcgaacctg cgaactttgc tcatgccagg aataaaggct
    24121 gaccatactg acaatcagcg tcagtaatgc gcccgttaaa aatgcacccc gtaaactgtt
    24181 gctgatactg agctgacgaa gccgttgcaa taatctcccc ttcatttcag ctcttccagt
    24241 ttgtgaatcg ccagccgctg attgttcaga aaccagatct gccactccat cattttttgt
    24301 tcggcaaagc ttttattatc aaactgcgcc agccaggttt catcttcgct gcttgccgca
    24361 tccaccggga cgctggtcaa taaggctctg atttcaggta aggggcgttt aagccgcgtt
    24421 tctgcgctgt gcaacgctcg ccatgcatct ttaagctgcg caagacgaaa actgatcgcg
    24481 gtatcaaaca tgcgttgtac cagttgctga cgcttcagga tcagacgata gttcaacggc
    24541 ggctgggcca tcaaacgctg ttgttgcgcg gcgcgaggat tatcggcgct aagcggtgcg
    24601 acgggatact taccggtatt cgcgtcagcc agtatccttt gccctttcgg acttaataag
    24661 taatgaataa aagcacgcgc ttcgtctgca tgacggctgt ttttcaacac cgcgacgtaa
    24721 gtgggcgaca ccgcagaata cggaaaatag gtaaaagcaa gattaggatc gttgagtagc
    24781 aaattagcat agttatcaat gaccggcccg gcaacgccaa gcccgctttt gattttatcc
    24841 gctacgccga aactgcgaga ggaaatcgtg accaaattac ccgagattgc cagcagcgtc
    24901 gcccaccctg ccgtccagcc tttttgctgc aacagcgact ccaccatcaa atgattggtg
    24961 tctgagcgtg acggactgct cattaataga gcgccctggt aactgggcag gcccatatcc
    25021 tgccagtcgg caggcggcgg aagatggcgc gcagcgagcg ctgaacggtt gatcaatagc
    25081 ccaaatccgg ataccgctac cgccactgaa gttgagcgga tagaacgcgg caccagcttc
    25141 tggctggcgg caggcgcgct atccaatagc gccagctttt ggtgctcctg aaggtgttgc
    25201 aacagcatgg gggatgacgt caggatcaga tcgacatttt ccgcattcgc cgtatcaagt
    25261 aattgctcta aagaaccgct ggtacggttg agcgtacgaa tcatgacgga acccggctcc
    25321 gtctgccagc gctggataat ccaggcggtc gcgctgggtg aaaaggtcgt tgccatcacc
    25381 agctcgcggc tgtacgcctg gcaagaaccg aacatcgccg ccagccatag cgtaaaagcg
    25441 cccactctgg cgaaacaacc acagtatgag aaaagtcgat ttgtgatccc gttcataaat
    25501 atcgatatca cataaagaaa atattgagac aaaacttacc cttttatttc tgttggcatc
    25561 cagaacaacg ttatttgaat aataacgggt ccgtcgcccg aaaacatcaa taaagcgtat
    25621 cagatcactg gcagcaaatt tgttaatatc cgcacatgct aacgataaaa cggccatgcc
    25681 aataattaaa gtttcaccac acccttcagg atgggtcaaa aataaccttt aaattcaccc
    25741 aattgagtca attttgacac atttcctcga cttgaatttt attgtcactc ctttcactct
    25801 accgacaaaa cctcctgatg ttcatctcac tataaaatac aggtgactcc atgttaacaa
    25861 tattaaaaac agggcgatcg gcgcataaag tcccaccgga aaaagtccag gctacgtatg
    25921 gtcgatatcg tatacaggca ttgttaagcg tatttctggg atatctcgct tactatatag
    25981 tcagaaacaa cttcacatta tcgacgcctt atttaaaaga gcaattggat ctcagcgcta
    26041 cgcaaatcgg cctgctgagt agctgtatgc ttattgctta cggaatcagt aaaggcgtaa
    26101 tgagcagtct ggcggataaa gccagcccaa aagtcttcat ggcgtgcggt ctggtactct
    26161 gcgtgattgt taacgttggg ctgggattca gtagcgcatt ctggatattt gccgctctgg
    26221 tggtcttcaa tggccttttt cagggcatgg gcgtcggccc ctcgtttatt actattgcaa
    26281 actggttccc tcgtcgggaa cgcggacgcg taggcgcctt ctggaatatc tcgcataacg
    26341 ttggcggcgg gatcgtcgcg cctatcgtcg gtgcggcttt tgcgatattg ggcagcgaac
    26401 actggcaaag cgccagttat atcgttccgg cctgcgtcgc cgtcattttt gccttaattg
    26461 ttctggtctt gggaaaaggt tcgccgcgcg aagaaggtct tccctccctg gaacagatga
    26521 tgccggaaga aaaagtcata ctgaaaacga agaatacggc aaaagcgccg gaaaatatga
    26581 gcgcatggca aatcttctgt acttatgtgc tgcgcaataa aaatgcctgg tatatttcgc
    26641 tggtcgatgt cttcgtctat atggtgcggt ttggcatgat tagctggttg cctatctatc
    26701 tgttgacagt aaaacacttt tcaaaagaac agatgagcgt cgcgtttctc tttttcgagt
    26761 gggcggcaat tccctctacg ctactggcag gctggctgtc agataaactg tttaagggcc
    26821 gcagaatgcc gttagccatg atttgcatgg cgctgatttt tgtctgtctg atcggatact
    26881 ggaaaagtga atctttgctg atggtaacga ttttcgccgc cattgtaggt tgtctgattt
    26941 acgtcccgca attcctcgcg tccgtacaga caatggagat agtccccagc tttgccgtag
    27001 gttccgccgt cggtttacgt gggttcatga gctatatttt cggcgcctcg ttgggcacca
    27061 gcctgtttgg cgtcatggtg gataaactgg gctggtacgg cggattttat cttctgatgg
    27121 gcggcatcgt gtgctgcatt ctattctgtt acctctccca tcgcggcgcg ctggaactgg
    27181 aacgccagcg ccagaatgcg ttacataatc aggactcact gcagcttgcg gacgcgcaat
    27241 aaacgattag ccttcccggg gaacagaagc gccgacattg tcggcgctat ctattcgctg
    27301 acatcgtgta taccaaaaat aattcgagtt gcttaaaagc ggcaagggag tgagtccccg
    27361 ggagcataga taacgatgtg actggggtga gcgacgtccc gtcagggcga ggcccatgaa
    27421 tgggccgagt aatccatagc caacacataa gccacttgaa gtatgaaagg tatgtactga
    27481 ctaacgctta ccgtatccca ccataaagcg aataattaac ccacatgccg gtgcgagaaa
    27541 aagcaataat ccgctaacga tgtcatcgcc atcctgcagc catacattga gtaaataaat
    27601 cagcgcggca aggataacca ttcccgtaaa agaagaaacc gcagaaaaag cccccatcac
    27661 ctgaccgata tagccactca cggcaagtat acttattgca agaaatgtcc ataaatagat
    27721 catctataat acctcctgtc tatggcaagg cttccatata gccttacggt ccctctcact
    27781 tctcctttaa gataaacctt atcagcacgt catttccata acatttatct cacattttat
    27841 tttctaatca tttttcaata accttcgtct gaaataaaat tatcactgta aaaacaatgc
    27901 attaaaaata atgattagct tatttttgct acgggagaaa tatttacgct tcttgataaa
    27961 gaatttctgg gcgcgagtaa ataactggtg gtacattagc ctgcctggcg ttcatgccct
    28021 cgtggtttag tactgactta gttttacact ccttacggga accattgtcg tacatgatgg
    28081 cctaactata cgcaaatcat tcaagttacc ctgatgagct tactcaagta agtgcttcgg
    28141 ataagcgaac gcaacttgaa ggatgatgcg tatttcagag tgtaccgctg cggataatga
    28201 ctcttctgcg atacattatt ttcgtatcta cagaaggtat tttatgtttc ctcaaagcaa
    28261 attttcacgc gcgtttttgc acccgcgcta ctggctgacg tggtttggcg ttggcgtcct
    28321 ctggttactg gtgcagcttc cctacccggt tttgcgtttt ctgggcaccc gcaccggtaa
    28381 gctggcgcgc cccttcctga agcgacgtga gtcgatcgct cagaaaaaca ttgaactctg
    28441 ttttccgacc ctctcccggg aagaaaggga aaaactgatc gccgagaatt tccactctct
    28501 tggcatggcg ctgcttgaaa cgggcatggc ctggttctgg cctgatagcc gggttcgcaa
    28561 atggtttgat gtggacgggc tggacaacct tacccgtgcg caggcgcaaa atcgcggcgt
    28621 aatggtcgtt ggcgtgcatt ttatgtcgct ggaattggga ggccgggtaa tgggtctctg
    28681 ccagccgatg atggcgacct atcgtccgca taacaatccg ctcatggagt gggtgcagac
    28741 gcgcggtcgt atgcgctcaa ataaagcgat gatcggcaga aacaatctgc gcggcattgt
    28801 gggcgcgcta aaaaaagggg aagccgtttg gtttgctccc gaccaggact acggtcctaa
    28861 aggcagctcc tttgcgccat ttttcgcggt tgaaaacgtc gccaccacca acggtaccta
    28921 tgtactgtcc aggctgtctg gcgccgccat gctgaccgtt acaatggtaa ggaaatccga
    28981 taactcgggt tatcgtctgt atattacccc tgaaatggaa ggttacccgg cagatgaaaa
    29041 tcaagccgct gcctatatga ataaaattat tgagaaagag atcatgcgcg ccccggagca
    29101 atatctctgg attcatcgcc gtttcaagac tcgcccgttg ggggaagcgt cactctacat
    29161 ctgaaaaagg ccgcaaggcc ttttattttg tcatttcgca ttgccataat attcacatcg
    29221 taaattactc attcctgctt ttagcgataa gtctcctgtt tacaggcgtt tttttactgt
    29281 gtcggcggcg tcgctcaata gcgattcatc actgtcagaa attaaactgt cgccgattca
    29341 cgacacttgt aagttactaa aaataaataa gaaaatgcct cttgtttcac ctcattttta
    29401 ggcgtacatt agcgccgtct ggagcgatga cgcgcagaat tctgaggtga tgcaggcggt
    29461 cgaaacacga ataattctca atttcgtatt atccggcatc aactctctat aatcaggtaa
    29521 gtgtaagttc atttaggcgt acgacaggta cgcggagaga tgaaacgtga aatatttctt
    29581 tatgggcatt tcatttatgg tcatcgtttg ggccggtact ttcgccctga tgatttaaaa
    29641 gtacaatg
//
LOCUS       DAGWFR010000032        29299 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.032, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000032 DAGWFR010000000
VERSION     DAGWFR010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 29299)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29299)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29299
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.032"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..335
                     /locus_tag="MOX77_001534"
     CDS             <1..335
                     /locus_tag="MOX77_001534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="recombination factor protein RarA"
                     /protein_id="HCA3357102.1"
                     /translation="VYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKLMK
                     EMGYGQEYRYAHDEPNAYAAGEVYFPPEIAQTRYYHPTNRGLEGKIGEKLAWLAEQDQ
                     NSPTKRYR"
     gene            594..1886
                     /gene="serS"
                     /locus_tag="MOX77_001535"
     CDS             594..1886
                     /gene="serS"
                     /locus_tag="MOX77_001535"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000887397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HCA3357103.1"
                     /translation="MLDPNLLRNEPDAVAEKLARRGFKLDVDKLRALEERRKVLQVNT
                     ENLQAERNSRSKSIGQAKARGEDIEPLRLEVNKLGEELDAAKAELDTLLAEIRDIALT
                     IPNLPADEVPVGKDENDNVEVSRWGTPREFDFEIRDHVTLGEMHSGLDFAAAVKLTGS
                     RFVVMKGQIARMHRALSQFMLDLHTEQHGYSENYVPYLVNHDTLYGTGQLPKFAGDLF
                     HTRPLEEEADSSNYALIPTAEVPLTNLVRDEIIDEDQLPIKMTAHTPCFRSEAGSYGR
                     DTRGLIRMHQFDKVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMG
                     FGACKTYDLEVWVPAQNTYREISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSG
                     LAVGRTLVAVMENYQQADGRIEVPEVLRPYMNGLEYIG"
     gene            2123..4567
                     /gene="dmsA"
                     /locus_tag="MOX77_001536"
     CDS             2123..4567
                     /gene="dmsA"
                     /locus_tag="MOX77_001536"
                     /EC_number="1.8.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dimethylsulfoxide reductase subunit A"
                     /protein_id="HCA3357104.1"
                     /translation="MKTKIPDAVLAAEVSRRGLVKTTAIGGLAMASSAFTLPFTRIAN
                     AAEAISPTKTDEKVVWSACTVNCGSRCPLRMHVVDGEIKYVETDNTGNDDYDGLHQVR
                     ACLRGRSMRRRVYNPDRLKYPMKRVGARGEGKFERISWDEAYDIIATNMQRLIKEYGN
                     ESIYLNYGTGTLGGTLTRSWPPGKTLVARLMNCCGGYLNHYGDYSSAQIAAGLNYTYG
                     GWADGNSPSDIENSKLVVLFGNNPGETRMSGGGGTYYLEQARQKSNARMIIIDPRYTD
                     TGAGREDEWIPIRPGTDAALVNGLAYVLITENMVDQPFLDKYCVGYDEKTLPASAPKN
                     GHYKAYILGLGKDGIAKTPEWAAQITGIPADRIIKLAREIGSAKPAYICQGWGPQRHA
                     NGEIATRAISMLAILTGNVGINGGNSGAREGSYALPFERMPTLENPVETSISMFMWTD
                     AIERGPEMTALRDGVRGKDKLDVPIKMIWNYAGNCLINQHSEINRTHEILQDDSKCEM
                     IVVIDCHMTSSAKYADILLPDCTASEQMDFALDASCGNMSYVIFTDQAIKPRFECKTI
                     YEMTSELAKRLGVEQQFTEGRTQEEWMRHLYEQSRKSIPNLPTFEEFRKQGIFKQRDP
                     EGHHVAYKDFREDPQANPLTTPSGKIEIYSQALADIAATWELPEGDVIDPLPIYTLGF
                     ENYNDPLTDKFPLQLTGFHYKARVHSTYGNVDVLKAACRQEMWINPMDAQKRGINNGD
                     KVRIFNDRGEVHIEAKVTPRMMPGVVALGEGAWYDPDAKRVDQGGCINVLTSQRPSPL
                     AKGNPSHTNLVQVEKA"
     gene            4578..5195
                     /gene="dmsB"
                     /locus_tag="MOX77_001537"
     CDS             4578..5195
                     /gene="dmsB"
                     /locus_tag="MOX77_001537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000213046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dimethylsulfoxide reductase subunit B"
                     /protein_id="HCA3357105.1"
                     /translation="MTTQYGFFIDSSRCTGCKTCELACKDYKDLTPDVSFRRIYEYAG
                     GDWQEDNGVWHQNVFAYYLSISCNHCEDPACTKVCPSGAMHKRDDGFVVVNEEVCIGC
                     RYCHMACPYGAPQYNAAKGHMTKCDGCYDRVAEGKKPICVESCPLRALDFGPIDELRK
                     KHGELAAVAPLPRAHFTKPNIVIKPNANSRPTGDTTGYLANPKEV"
     gene            5197..6060
                     /locus_tag="MOX77_001538"
     CDS             5197..6060
                     /locus_tag="MOX77_001538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dimethyl sulfoxide reductase anchor subunit"
                     /protein_id="HCA3357106.1"
                     /translation="MGSGWHEWPLMIFTVFGQCVAGGFIVLALALMKGDLRAETQQRV
                     IACMFGLWVLMGIGFIASMLHLGSPMRAFNSLNRVGASALSNEIASGSVFFAVGGIGW
                     LLAVLKKLPPALRTLWLIITMVLGVVFVWMMVRVYNSIDTVPTWYSVWTPLGFFLTLF
                     MGGPLLGYLLLRIAGVNGWAMRLLPAVSVLALVVIAIMVAMQGAELATIHSSIQQASA
                     LVPDYGSLMAWRMVLLAAALCCWIVPQLKGYQPAVPLLSVAFILMLAGELIGRGVFYG
                     LHMTVGMAVAS"
     gene            6410..7558
                     /locus_tag="MOX77_001539"
     CDS             6410..7558
                     /locus_tag="MOX77_001539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3357107.1"
                     /translation="MSIYTRPVMLLLCGLLLLTLAIAVLNTLVPLWLAQANLPTWQVG
                     MVSSSYFTGNLVGTLFTGYLIKRIGFNRSYYLASLIFAAGCVGLGVMVGFWSWMSWRF
                     IAGIGCAMIWVVVESALMCSGTSHNRGRLLAAYMMVYYMGTFLGQLLVSKVSGELLHV
                     LPWVTGMILAGILPLLFTRIVNQQTQARHSSSISAMLKLRQARLGVNGCIISGIVLGS
                     LYGLMPLYLKHQGMANASIGFWMAVLVSAGILGQWPMGRLADKFGRLLVLRVQVFVVI
                     LGSIAMLTQAAMAPALFILGAAGFTLYPVAMAWACEKVEHHQLVAMNQALLLSYTVGS
                     LLGPSFAAMLMQNYSDNLLFIMIASVSFIYLLMLLRNVGQTPNPVAHI"
     gene            7776..9197
                     /locus_tag="MOX77_001540"
     CDS             7776..9197
                     /locus_tag="MOX77_001540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HCA3357108.1"
                     /translation="MPNVQEKQLRWYNIALMSFITVWGFGNVVNNYANQGLVVVFSWV
                     FIFALYFIPYALIVGQLGSTFKEGKGGVSTWIKHTMGPGLAYLAAWTYWVVHIPYLAQ
                     KPQAILIALGWALKGDGSLIKEYTVVALQGLTLALFVFFMWVASRGMKSLKVVGSVAG
                     IAMFIMSILYVVMAVTAPAITNVEIATANITWQSFIPHIDFTYITTISMLVFAVGGAE
                     KISPYVNQTRNPGKEFPKGMLFLAVMVAVCAILGSLAMGMMFDSRHIPDDLMTNGQYY
                     AFQKLGEYYHMGNSLMVIYAIANTLGQIAALVFSIDAPLKVLLGDADSKYIPQRLCRT
                     NASGTPVNGYLLTLVLVAILIMLPTLGIGDMNNLYKWLLNLNSVVMPLRYLWVFVAFI
                     AVIRLAQKYKPEYVFIRNRALALTVGIWCFAFTAFACLTGIFPKMEAFTPEWAFQLTL
                     NIVTPFVLVGLGLIFPLLARRNT"
     gene            complement(9489..10265)
                     /gene="pflA"
                     /locus_tag="MOX77_001541"
     CDS             complement(9489..10265)
                     /gene="pflA"
                     /locus_tag="MOX77_001541"
                     /EC_number="1.97.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate formate lyase 1-activating protein"
                     /protein_id="HCA3357109.1"
                     /translation="MTNESVAVTADKKPVIGRIHSFESCGTVDGPGIRFITFFQGCLM
                     RCLYCHNRDTWDTHGGKEITVEDLMKEVVTYRHFMNASGGGVTASGGEAILQAEFVRD
                     WFRACKKEGIHTCLDTNGFVRRYDPVIDELLDVTDLVMLDLKQMNDEIHQNLVGVSNH
                     RTLEFAQYLSKKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHELG
                     KHKWVAMGEEYKLDGVKPPKKETMERVKGILEQYGHKVMY"
     gene            complement(10520..10717)
                     /locus_tag="MOX77_001542"
     CDS             complement(10520..10717)
                     /locus_tag="MOX77_001542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010989135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357110.1"
                     /translation="MQRQALDRRNVLWTHLNYVENYFCSDHKNGINHLKKEAVHKQQN
                     QDAMDDTLTVCIAVRALRADE"
     gene            10859..11817
                     /gene="sopD2"
                     /locus_tag="MOX77_001543"
                     /pseudo
     CDS             10859..11817
                     /gene="sopD2"
                     /locus_tag="MOX77_001543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459947.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector SopD2"
     gene            complement(11893..14175)
                     /gene="pflB"
                     /locus_tag="MOX77_001544"
     CDS             complement(11893..14175)
                     /gene="pflB"
                     /locus_tag="MOX77_001544"
                     /EC_number="2.3.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate C-acetyltransferase"
                     /protein_id="HCA3357111.1"
                     /translation="MSELNEKLATAWEGFTKGDWQNEVNVRDFIQKNYTPYEGDESFL
                     AGATDATTKLWDSVMEGVKQENRTHAPVDFDTSVASTITSHDAGYINKALEKIVGLQT
                     EAPLKRAIIPFGGIKMVEGSCKAYNRELDPMIKKIFTEYRKTHNQGVFDVYTPDILRC
                     RKSGVLTGLPDAYGRGRIIGDYRRVALYGIDYLMKDKFAQFTSLQSDLENGVNLEATI
                     RLREEIAEQHRALGQIKEMAAKYGCDISGPATNAQEAIQWTYFGYLAAVKSQNGAAMS
                     FGRVSTFLDAYIERDLKAGKITEQDAQEMIDHLVMKLRMVRFLRTPEYDELFSGDPIW
                     ATESIGGMGVDGRTLVTKNSFRFLNTLYTMGPSPEPNITVLWSEKLPLNFKKFAAKVS
                     IDTSSLQYENDDLMRPDFNNDDYAIACCVSPMIVGKQMQFFGARANLAKTMLYAINGG
                     VDEKLKMQVGPKSEPIKGDVLNFDEVMDRMDHFMDWLAKQYVTALNVIHYMHDKYSYE
                     ASLMALHDRDVIRTMACGIAGLSVAADSLSAIKYAKVKPIRDEDGLAIDFEIEGEYPQ
                     FGNNDARVDDMAVDLVERFMKKIQKLTTYRGAIPTQSVLTITSNVVYGKKTGNTPDGR
                     RAGAPFGPGANPMHGRDQKGAVASLTSVAKLPFAYAKDGISYTFSIVPNALGKDDEVR
                     KTNLAGLMDGYFHHEASIEGGQHLNVNVMNREMLLDAMEHPEKYPQLTIRVSGYAVRF
                     NSLTKEQQQDVITRTFTQTM"
     gene            complement(14235..15092)
                     /gene="focA"
                     /locus_tag="MOX77_001545"
     CDS             complement(14235..15092)
                     /gene="focA"
                     /locus_tag="MOX77_001545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate transporter FocA"
                     /protein_id="HCA3357112.1"
                     /translation="MKADNPFDLLLPAAMAKVAEEAGVYKATKHPLKTFYLAITAGVF
                     ISIAFVFYITATTGTGAMPYGMAKLIGGICFSLGLILCVICGADLFTSTVLIVVAKAS
                     GRITWGQLAKNWLNVYFGNLIGALLFVLLMWLSGEYMTANGQWGLNVLQTADHKMHHT
                     FIEAVCLGILANLMVCLAVWMSYSGRSLMDKAFIMVLPVAMFVASGFEHSIANMFMIP
                     MGIVIRDFATPEFWTAVGSSPESFSHLTVMSFITDNLIPVTIGNIIGGGLLVGLTYWV
                     IYLRGNEHH"
     gene            complement(15497..17257)
                     /locus_tag="MOX77_001546"
     CDS             complement(15497..17257)
                     /locus_tag="MOX77_001546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     accessory protein YcaO"
                     /protein_id="HCA3357113.1"
                     /translation="MTQTFIPGKDAALEDSIARFQQKLLDLGFHIEEASWLNPVPNVW
                     SVHIRDKECALCFTNGKGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVH
                     YPNEKWFSLTENDDVPEGLLDARLRAFYDPENELTGSQLIDLQSGNEERGVCGLPFTR
                     QSDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPE
                     IPAEVMARYPAVMESIATLEAEGFPIFAYDGSLGGKYPVICVVLFNPANGTCFASFGA
                     HPDFGVALERTVTELLQGRGLKDLDVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDL
                     FKQDADYPFTDWSFSGTTEEEFATLMAIFAAEDKEVYIADYEHLGVYACRIIVPGMSD
                     IYPAEDLWLANNNMGSHLREILLSLPGSAWNKEDYLNLIEQLDEEGFDDFTRVRELLG
                     LATGADNGWYTLRVGELKAMLALAGGDLEQALIWTEWTMEFNSSVFSPVRANYYRCLQ
                     TLLLLSQEDARQPLQYLNAFIKMYGAEAVEAASTALSGEAAFYGLPAVDHDLQAFPAH
                     QSLLKAYDKLQRAKAAYWSK"
     gene            17394..18086
                     /locus_tag="MOX77_001547"
     CDS             17394..18086
                     /locus_tag="MOX77_001547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF421 domain-containing protein"
                     /protein_id="HCA3357114.1"
                     /translation="MKAFDLQRMALDNVSVAFLGEVALRSFYTFVLVFLFLKVTGRRG
                     VRQMSLFEVLIILTLGSAAGDVAFYDDVPMLPVLVVFITLALLYRLVMWLMAHSEKLE
                     DLLEGKSVVIVEDGELAWEKLQRSNMTEFEFFMELRLNGVEQLGQVRLAILETNGQIS
                     VYFFENKDVKPGLSILPEHCTPRFIVAPEAGDYACVRCSEVIRMNVGEKQLCPRCANP
                     EWTKASRAKRVV"
     gene            18272..19360
                     /gene="serC"
                     /locus_tag="MOX77_001548"
     CDS             18272..19360
                     /gene="serC"
                     /locus_tag="MOX77_001548"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoserine/phosphohydroxythreonine
                     transaminase"
                     /protein_id="HCA3357115.1"
                     /translation="MAQVFNFSSGPAMLPAEVLKLAQQELRDWHGLGTSVMEISHRGK
                     EFIQVAEEAEQDFRDLLNIPSNYKVLFCHGGGRGQFAGVPLNLLGDKTTADYVDAGYW
                     AASAIKEAKKYCAPQIIDAKITVDGKRAVKPMREWQLSDNAAYLHYCPNETIDGIAID
                     ETPDFGPEVVVTADFSSTILSAPLDVSRYGVIYAGAQKNIGPAGLTLVIVREDLLGKA
                     HESCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELL
                     YGVIDNSDFYRNDVAQANRSRMNVPFQLADNALDKVFLEESFAAGLHALKGHRVVGGM
                     RASIYNAMPIEGVKALTDFMIDFERRHG"
     gene            19431..20714
                     /gene="aroA"
                     /locus_tag="MOX77_001549"
     CDS             19431..20714
                     /gene="aroA"
                     /locus_tag="MOX77_001549"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HCA3357116.1"
                     /translation="MESLTLQPIARVDGAINLPGSKSVSNRALLLAALACGKTVLTNL
                     LDSDDVRHMLNALSALGINYTLSADRTRCDITGNGGPLRASGTLELFLGNAGTAMRPL
                     AAALCLGQNEIVLTGEPRMKERPIGHLVDSLRQGGANIDYLEQENYPPLRLRGGFIGG
                     DIEVDGSVSSQFLTALLMTAPLAPEDTIIRVKGELVSKPYIDITLNLMKTFGVEIANH
                     HYQQFVVKGGQQYHSPGRYLVEGDASSASYFLAAGAIKGGTVKVTGIGRKSMQGDIRF
                     ADVLEKMGATITWGDDFIACTRGELHAIDMDMNHIPDAAMTIATTALFAKGTTTLRNI
                     YNWRVKETDRLFAMATELRKVGAEVEEGHDYIRITPPAKLQHADIGTYNDHRMAMCFS
                     LVALSDTPVTILDPKCTAKTFPDYFEQLARMSTPA"
     gene            20857..21618
                     /locus_tag="MOX77_001550"
     CDS             20857..21618
                     /locus_tag="MOX77_001550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HCA3357117.1"
                     /translation="MKNKSLLLAVAISATLLAGCKNGVNGNLIASSGMSAYKAATLSD
                     ADVKALSNNACKQMDSENQLAGSKSKYTKRLSKIAKALGNNIDGTPVSYKVYMTSDIN
                     AWAMANGCVRVYSGLMDLMTDNEIEGVLGHELGHVSLGHSRKAMQTAYATLAARDAIS
                     ATSGVAAQLSQSQLGDLAEGVINLAFSRSQESDADDFSYNLLKKRGINTQGLVTAFDK
                     FAIMDAGHAKSLMDSHPASADRAQHMRDRIAEDKK"
     gene            21791..22474
                     /gene="cmk"
                     /locus_tag="MOX77_001551"
     CDS             21791..22474
                     /gene="cmk"
                     /locus_tag="MOX77_001551"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000125007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HCA3357118.1"
                     /translation="MTAIAPVITIDGPSGAGKGTLCKAMAEALQWHLLDSGAIYRVLA
                     LAALHHHVDLASEDALVPLASHLDVRFVSTDGNLEVILEGEDVSGEIRTQEVANAASQ
                     VAAFPRVREALLRRQRAFREAPGLIADGRDMGTVVFPDAPVKIFLDASSEERAHRRML
                     QLQENGFSVNFERLLAEIKERDDRDRNRAVAPLVPAADALVLDSTRLSIEQVIEKALQ
                     YARQKLALA"
     gene            22588..24261
                     /gene="rpsA"
                     /locus_tag="MOX77_001552"
     CDS             22588..24261
                     /gene="rpsA"
                     /locus_tag="MOX77_001552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HCA3357119.1"
                     /translation="MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKS
                     ESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAY
                     EDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLD
                     QKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLL
                     HITDMAWKRVKHPSEIVNVGDEINVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPE
                     GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLD
                     IDEERRRISLGLKQCKSNPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVH
                     LSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKK
                     GAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDDVEAKFTGV
                     DRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKGE"
     gene            24417..24701
                     /gene="ihfB"
                     /locus_tag="MOX77_001553"
     CDS             24417..24701
                     /gene="ihfB"
                     /locus_tag="MOX77_001553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006819309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HCA3357120.1"
                     /translation="MTKSELIERLATQQSHIPAKAVEDAVKEMLEHMASTLAQGERIE
                     IRGFGSFSLHYRAPRTGRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG"
     gene            24931..27195
                     /locus_tag="MOX77_001554"
     CDS             24931..27195
                     /locus_tag="MOX77_001554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEC family protein"
                     /protein_id="HCA3357121.1"
                     /translation="MKITTVSVCVVCGILPLMILPVLPDTWILAVLFCLACLLCLIPH
                     HYARYAALTLLFFMWGIFAARQAIWVGNVLPAATQEATVVITATDHMTTHYGRITHLH
                     GKPLFPAVGIVLHGQYLPTEVCAGQQWAMTLKVRAVHGQLNEGGFDSQRYALAQHQPL
                     TGRFLQAKAINPECSLRGRYLASLRATLAPYPWQQVILALGMGERGAVSQEVKAVMRD
                     TGTAHLMAISGLHIAFAALLAAGLIRGGQFFLPVRWIRWQTPLLGGILCAICYAWLTG
                     LQPPALRTVAALSVWGGLKLSGRQWSGWQVWCCCLAAIIFADPVAVISQSLWLSAFAV
                     AGLLFWYQWFPAPNGNFPRGLRWLLNLLHLQAGITLLLLPLQVALFHGISVTAMLANL
                     FAVPWVTFVTVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYLLNALPQGWVNID
                     NRWQWLTLLPWLTLIAWRLNVWRTWPAVCLCGLLLMSWPLWRPINASGWQVHMLDVGQ
                     GLAIAIVRGDKVILYDTGRAWPEGDSGQQVIIPWLRWHNLTPEGVILSHEHLDHRGGL
                     RSLQQVWPSMWIRSPLGWQGHLPCFRGEQWQWQGLTFQAHWPLRESADRGNNRSCVVK
                     VDDGVHSILLTGDIEAGAEQKMLSRYWRHLAATFIQVPHHGSNTSSSLPFIQRVHGEA
                     ALASASRYNAWRLPSRKVKQRYRQQAYQWFDTPHQGQISLLFSPQGWRIQGLRDQILP
                     RWYHQWFGVSEDNG"
     gene            27232..28980
                     /gene="msbA"
                     /locus_tag="MOX77_001555"
     CDS             27232..28980
                     /gene="msbA"
                     /locus_tag="MOX77_001555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A ABC transporter ATP-binding
                     protein/permease MsbA"
                     /protein_id="HCA3357122.1"
                     /translation="MHNDKDLSTWQTFRRLWPTIAPFKAGLIVAGIALILNAASDTFM
                     LSLLKPLLDDGFGKTDRSVLLWMPLVVIGLMILRGITSYISSYCISWVSGKVVMTMRR
                     RLFGHMMGMPVAFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMM
                     FYYSWQLSIILVVLAPIVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVL
                     IFGGQEVETKRFDKVSNKMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVM
                     DSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSEQEKDEGKRV
                     IDRATGDLEFRNVTFTYPGREVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRF
                     YDIDEGHILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEEYSREQI
                     EEAARMAYAMDFINKMDNGLDTIIGENGVLLSGGQRQRIAIARALLRDSPILILDEAT
                     SALDTESERAIQAALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGIIVERGTHSELL
                     AQHGVYAQLHKMQFGQ"
     gene            28977..>29299
                     /gene="lpxK"
                     /locus_tag="MOX77_001556"
     CDS             28977..>29299
                     /gene="lpxK"
                     /locus_tag="MOX77_001556"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HCA3357123.1"
                     /translation="MIARIWSGESPLWRLLLPLSWLYGLVSGAIRLSYKLGLKRAWRA
                     PVPVVVVGNLTAGGNGKTPVVIWLVEKLQQRGVRVGVVSRGYGGKAAAYPLLLTPETT
                     TAEAG"
BASE COUNT         7012 a         7042 c         7846 g         7399 t
ORIGIN      
        1 tcgtttatct cgcctgcgcg ccgaagagca acgccgtcta taccgccttt aaggctgcgc
       61 tggccgacgc gcgcgaacgt cctgattatg acgttcctgt ccatctgcgt aatgcgccaa
      121 ccaaactgat gaaagagatg ggctatggcc aggaataccg ctatgcccac gatgagccca
      181 atgcctatgc tgcgggtgaa gtgtacttcc cgccggaaat cgcgcaaacg cgctattatc
      241 atccgacaaa tcgtggtctg gaaggtaaga ttggcgaaaa gctcgcctgg ctggctgaac
      301 aggatcaaaa tagccccaca aaacgctacc gctagtgtaa acgttgcggt aaggttatct
      361 ctaaatatga tgctccaggt atcatggcgt tgatgatgaa cctcgttatg cctgatagca
      421 cgttgcttat gaggtccgcg ggtatagcgc aatggatgcg ttgttgctgt cgtcggtcag
      481 gtaaggcgaa aacgtcgcta ttacgtaaac ggggtttacg ttcatcaata caatcagagg
      541 cgatcatcaa ttgatcgcgt ttccttttat tattcgataa gcacaggata agcatgctcg
      601 atcccaatct gctgcgtaat gagccagacg cagtcgctga aaaactggca cgccggggct
      661 ttaagctgga tgtagataag ctgcgcgctc ttgaagagcg tcgtaaagtt ttgcaggtca
      721 acacggaaaa cctgcaggcg gagcgtaatt ctcgatcgaa atccatcggc caggcgaaag
      781 cgcgcgggga agatatcgag cctttacgcc tggaagtgaa taaactgggc gaagagttgg
      841 atgcggcgaa agccgagctg gataccttgc tggcggagat ccgcgatatc gcgctgacca
      901 tcccaaacct gcctgcggat gaagtgccgg taggtaaaga tgaaaacgac aacgttgaag
      961 tcagccgctg gggtaccccg cgtgagtttg attttgaaat ccgcgatcac gtcaccttag
     1021 gggaaatgca ctccggcctc gactttgccg ctgcggttaa gctgaccggc tcccgctttg
     1081 tggtgatgaa aggacagatt gcgcgtatgc atcgcgcatt gtcgcagttc atgttggatc
     1141 tgcatacgga acagcacggc tatagcgaaa actacgtgcc gtatctggtt aaccacgaca
     1201 cgctgtatgg caccggtcaa ctgccgaaat tcgcaggcga cttgttccat acccgtccgc
     1261 tggaagaaga agcagacagc agtaactatg ctttgatccc gacggcggag gttccgctga
     1321 ccaatctggt acgcgatgaa atcatcgacg aagatcagct gccgattaaa atgacggcgc
     1381 atacgccttg tttccgttct gaagcaggtt cttatggtcg tgatacccgc ggcctgattc
     1441 gtatgcatca gtttgacaaa gttgagatgg tgcagatcgt tcgcccggaa gattctatgg
     1501 ctgcgttgga agagatgacc ggccacgcgg aaaaagtgct ccagctactg ggactgccgt
     1561 accgtaaaat cattctgtgc actggcgata tgggcttcgg cgcctgcaaa acttatgacc
     1621 tcgaagtctg ggttccggcg cagaatacct accgcgagat ctcttcctgc tctaacgtct
     1681 gggacttcca ggcgcgtcgt atgcaggcac gctgtcgcag caagtccgac aaaaagaccc
     1741 gtctggtcca taccctgaat ggttctggtc tggcggtagg tcgtaccctg gtggctgtga
     1801 tggaaaacta tcagcaggct gatggtcgta ttgaagtgcc ggaagtatta cgtccgtata
     1861 tgaacggact ggaatatatc ggctaatcct cgctttctcc tcttctaaaa agcgcctgcg
     1921 ggcgcttttt ttatgccagt ttgataccgg acaataatcc ctaccctatt aggggtaata
     1981 ctgatttcga atgaaggtca gtttttaacg ctatttttct actttttcga tatatatcag
     2041 actttatagc gacgttatcg ctatataaaa ttctatacat cgttttattg cttttttatt
     2101 gtgagcagca gagtgagccc ttatgaaaac taagatccct gatgccgtgc tggcagccga
     2161 ggtgagccgt cgtggtttag tcaaaaccac cgcgataggc ggcctggcga tggccagtag
     2221 cgcatttacc ctgccattta cccgcatcgc taacgccgca gaggcgataa gcccgacgaa
     2281 aaccgacgag aaagtcgtct ggagcgcctg tacggtaaac tgtggcagcc gttgtccgct
     2341 acgtatgcat gttgtggatg gcgaaatcaa atatgtagaa acggataata ccggaaacga
     2401 tgattacgat ggcctgcacc aggttcgcgc ctgcctgcgc ggtcgttcta tgcgtcgtcg
     2461 cgtctataac ccggatcgtc tcaagtatcc gatgaagcgc gtcggcgcgc gcggcgaagg
     2521 taaatttgag cgtattagct gggacgaagc ctacgatatc attgccacca atatgcagcg
     2581 tcttatcaaa gagtatggca acgagtccat ttatctgaac tatggcacgg gaacgctggg
     2641 cggcactttg acacgttcat ggccgccggg aaaaacgctg gtcgctcgtc tgatgaactg
     2701 ctgcggcggt tatcttaatc actacggtga ttactcttcc gcgcaaatcg cagcgggtct
     2761 gaattacacc tatggcggct gggcggatgg caatagtcca tccgacattg aaaacagtaa
     2821 gctggtggtg ttgtttggta ataaccctgg cgaaacccgc atgagcgggg gcggtggaac
     2881 gtattatctt gaacaggcgc ggcagaaatc aaacgcgcgg atgatcatta tcgatcctcg
     2941 ttacaccgac accggcgccg gtcgcgaaga tgagtggatt ccgattcgtc caggtaccga
     3001 tgcggcgctg gtcaatggtc tggcatatgt cttaatcacc gagaacatgg tcgatcagcc
     3061 gttcctggat aaatattgcg tcggttatga cgaaaaaacc ttgcctgcca gcgcgccgaa
     3121 aaacggtcac tacaaagcct atattctggg cttgggtaaa gacggtatcg caaagacgcc
     3181 ggagtgggcg gcgcaaatta ccggtattcc ggcagatcgc attattaaac tggcgcgaga
     3241 aatcggcagc gctaaacccg cctatatttg ccaggggtgg gggccacaac gtcatgctaa
     3301 tggagaaatc gccacgcgcg ccatctcgat gctggcgatc ctgacgggta atgttgggat
     3361 taacggcggt aacagcggcg cgcgcgaagg gtcttatgcc ctgccatttg aacgtatgcc
     3421 cacgttggaa aatccggttg aaaccagcat ctccatgttt atgtggaccg atgccattga
     3481 acgcggcccg gaaatgacag cgctgcgtga tggcgtgcgg gggaaagata agctggacgt
     3541 gccgatcaaa atgatctgga actatgctgg caactgtttg attaaccagc actctgagat
     3601 taaccgcacc cacgaaatcc tgcaggatga cagtaaatgt gaaatgatcg tcgttatcga
     3661 ctgtcatatg acctcgtcgg caaaatacgc cgatattctg ttgcctgatt gcactgcttc
     3721 tgagcagatg gactttgcgc tggatgcctc ctgcgggaac atgtcttacg ttatcttcac
     3781 tgaccaggcg attaaaccgc gcttcgagtg taagacgatt tatgagatga ccagcgaact
     3841 ggcgaaacgt cttggcgtgg aacaacagtt taccgaaggc cggacgcaag aagagtggat
     3901 gcgtcatctg tacgaacagt cgcgtaaatc cattccgaat ctgcccacct ttgaggagtt
     3961 ccgtaagcaa ggcatcttca aacagcgcga ccccgaaggc caccatgtcg cctataaaga
     4021 cttccgcgaa gatccgcaag cgaatccact tacaacgcca tcgggcaaga ttgaaatcta
     4081 ttcacaggcg ttggcggata tcgccgccac ctgggagctg ccggaaggcg acgtgatcga
     4141 tccattaccg atctacacgc taggttttga aaactataac gatccgctaa cggataaatt
     4201 cccgctgcag ttgacgggtt tccactataa agcgcgtgtg cattccactt atggcaacgt
     4261 agacgtactg aaagccgcct gtcgccagga aatgtggatt aacccaatgg atgcgcagaa
     4321 acgcggtatc aacaatggcg ataaagtccg catcttcaac gatcgcggcg aagttcatat
     4381 cgaggctaaa gtgacgccgc gcatgatgcc gggcgtggtc gctctgggag aaggcgcatg
     4441 gtatgacccg gatgcaaaac gcgtggatca gggcggatgt attaacgtac tgaccagtca
     4501 acgtccttct ccgctggcga aggggaaccc gtcacatacg aacctcgttc aggttgaaaa
     4561 ggcgtaagga gtaaccgatg acaacccagt atggattttt tattgattcc agccgttgca
     4621 ccggttgcaa aacctgcgaa ctggcctgca aggactacaa agatttgacc ccggatgtca
     4681 gcttccgccg catttatgag tatgcaggtg gcgactggca ggaggataac ggcgtctggc
     4741 accagaacgt ctttgcctac tatctctcca tctcctgtaa ccactgcgaa gacccggcct
     4801 gcaccaaagt ctgcccgagc ggcgcgatgc acaagcgcga tgacggtttt gtggtggtga
     4861 acgaagaggt ctgtatcggt tgccgctact gccacatggc ctgcccgtac ggcgcgccgc
     4921 agtacaacgc ggccaaaggt catatgacca agtgcgatgg ctgttatgac cgggtggcgg
     4981 aaggtaagaa accgatctgc gtcgaatcct gtccgctgcg ggcgctggat ttcggcccga
     5041 tagacgaact gcgcaaaaaa cacggtgagc tggctgccgt cgcgccgttg ccgcgcgcgc
     5101 atttcacgaa gccgaatatt gtgattaaac ccaacgccaa cagccgcccg accggggaca
     5161 ccaccggtta tctggccaat ccgaaggagg tataagatgg gaagtggatg gcatgaatgg
     5221 ccgttgatga tcttcacggt ctttggtcag tgcgtggccg gtggttttat tgttctggct
     5281 ctggcgctga tgaagggcga cctgcgcgcg gaaacgcagc agcgggtgat cgcctgtatg
     5341 tttggtctgt gggtgctgat ggggattggc tttatcgcct cgatgctgca tctgggctcg
     5401 ccgatgcgcg cgtttaactc gcttaaccgc gtgggtgctt ccgcactgag caatgaaatt
     5461 gccagcggct cggtgttttt tgcggtcggc gggatcggct ggctgctggc ggtactgaaa
     5521 aagctgccgc cggcactgcg cacactctgg ctgattatca cgatggtact gggcgtcgtc
     5581 ttcgtctgga tgatggtacg cgtctataac agcatcgata cagtaccgac ctggtatagc
     5641 gtctggacgc cgctgggctt cttcctgacg ctctttatgg gtggcccgct actgggttat
     5701 ctgctgctgc gcatcgcggg cgtgaacggt tgggcgatgc gtctgttgcc tgcggtttcg
     5761 gtgctggcgc tggtggttat tgccattatg gtggccatgc agggcgcgga actggcgacg
     5821 attcacagtt ccattcagca ggcgtctgct ctggtgccgg attatggttc gctgatggcc
     5881 tggcgtatgg tgctgcttgc ggcggcgttg tgctgctgga ttgtgccaca gttaaaaggg
     5941 tatcaacctg cggtaccgtt actctctgtc gccttcattc tgatgctggc gggggaattg
     6001 attggccgcg gcgtattcta tgggctgcat atgaccgtgg gcatggcggt agccagctaa
     6061 cgcgttgacg cgcattcggc ctgcagaacg tgcaggccga atacgccttt agccgccgtc
     6121 aatctaagga atataaccgg ggcggagaag gcgcatataa atccatagag aagaaaacga
     6181 agctaaagga accatgaaat ttttcgactg aacaaaacgc cgattttgcg ggttagatca
     6241 ataaaaacaa ggggatgaat ttttagcctt tcaatatatt cacgtgcaga ataagtaaat
     6301 cgaatcgata gtctcaaaac ttgcggatcg cccatgcgga gccgattgac aatgtttttg
     6361 gcgatggcat gatgcgcatg aaatttgaac ttcctcacgg tttttattca tgtccatcta
     6421 tacccgtccc gtcatgcttt tgctgtgcgg gctacttttg ttgaccctgg ccattgcggt
     6481 actgaatacg cttgtgccgc tgtggcttgc tcaggcaaac cttccgacct ggcaggtggg
     6541 gatggtcagc tcgtcttatt ttaccggcaa tctggtcggg acgttattta ccgggtattt
     6601 aattaaacgc attgggttta accgtagcta ttatcttgcc tcgctgatct tcgccgcggg
     6661 ttgtgtcggg ttgggggtga tggtggggtt ctggagctgg atgagctggc gttttattgc
     6721 cggtatcggc tgcgccatga tttgggtggt tgtcgaaagc gcgttgatgt gcagcggaac
     6781 ctcgcataat cgcggacgcc tgctggctgc ctatatgatg gtctattaca tggggacctt
     6841 ccttggacaa ttattggtca gtaaagtatc tggtgaattg ctgcacgtcc ttccctgggt
     6901 gaccggaatg attctggcgg gaattctgcc gctactcttt acccgaattg taaatcagca
     6961 aacgcaggca cgtcattcct cttctattag cgccatgctg aagctacgcc aggcgcgtct
     7021 tggcgtgaat ggttgtatta tttccggcat tgttcttggt tcattatatg gcctgatgcc
     7081 gttatatctg aagcatcagg ggatggctaa cgccagcatc ggtttctgga tggcggtgct
     7141 ggtgagcgcc ggtattttgg ggcaatggcc aatgggacgt ctggcggaca aatttggtcg
     7201 cttgctggta ttacgcgtac aggtattcgt tgtcatactc ggcagtattg ccatgttaac
     7261 ccaggcggcg atggcgccag ctctgtttat tctgggggcg gcgggtttta cgctttatcc
     7321 cgttgcaatg gcctgggcct gtgaaaaagt cgaacaccac cagcttgtgg caatgaacca
     7381 ggcgctgttg ttaagttata cggtagggag cctgttgggg ccgtcttttg ctgcgatgtt
     7441 aatgcagaat tattcagata atctgctgtt tattatgatc gccagcgtat cgtttattta
     7501 tctgctgatg ctgttacgta acgtcggcca gacgcctaat cctgtcgccc acatctaact
     7561 gttctctgaa tcgtatgcag gacgtgagtc ttgcatactc tttgtttatg ttttacgtaa
     7621 aataattgac ctgcataatt ttcttgcttt actgaaaaat aaaatgtgcc gaaggttata
     7681 attttgcgct cctctatttt ctctcttcgt ctttaccgcg cataatcccc cgcttcattt
     7741 atagtaatag cattgtgttc acgaaggatc gcgttatgcc gaatgtgcag gaaaaacagt
     7801 tgcgatggta caacatcgcc ctgatgtcgt ttattaccgt ttggggattc ggcaatgttg
     7861 tcaataacta tgctaaccag gggttagtgg ttgtcttctc ctgggtgttt atttttgcgc
     7921 tctattttat tccttatgcc ttaatcgtgg ggcaactggg ctcaaccttc aaagagggaa
     7981 aagggggcgt cagtacctgg attaagcata cgatggggcc ggggttggct taccttgcgg
     8041 catggactta ttgggtcgtg catattccct acctggcgca aaagccgcag gcgatactca
     8101 ttgcattggg atgggcttta aaaggcgacg gctcgttgat aaaagaatat accgtcgttg
     8161 ccttgcaggg gctgacgctg gcattgtttg ttttctttat gtgggttgct tcccggggga
     8221 tgaaatcgct aaaggttgtt gggtctgtgg ctgggattgc catgtttatc atgtcaattt
     8281 tatatgttgt gatggcagtg accgcgccag caattacaaa cgttgaaatt gcgaccgcta
     8341 acatcacctg gcagtcattt attcctcata tcgattttac ctatatcacc accatctcta
     8401 tgttggtctt tgcggttggt ggggcagaga agatctcgcc ttatgtcaac cagacgcgga
     8461 atccaggaaa agaatttccg aaggggatgc tctttttagc cgtcatggtt gcggtctgcg
     8521 ctatcctcgg ttcgttggcg atgggaatga tgtttgattc ccggcatata cctgacgatt
     8581 taatgaccaa tgggcaatat tatgcattcc agaaattggg tgagtattac catatgggta
     8641 attcattaat ggtgatttat gccattgcca atactctggg gcaaatcgcc gcgctggtgt
     8701 tttctattga tgcgccactg aaagtcttac tgggtgatgc agacagtaaa tatatcccgc
     8761 agcgcttatg tcgtactaac gcttcaggta caccagttaa cggttatttg ctgacattag
     8821 tgttggtcgc tatcttgatt atgttgccaa cgcttggcat cggcgatatg aacaacctgt
     8881 acaaatggct gcttaatctc aattcagtcg ttatgccgct gcgctatctg tgggtatttg
     8941 tcgcctttat tgccgtcatt cgactggcgc aaaagtacaa acccgaatat gtgtttattc
     9001 gcaaccgggc gttggcgtta actgtgggaa tatggtgttt tgccttcacc gcgtttgcct
     9061 gccttaccgg tattttcccc aaaatggagg cgttcacgcc ggagtgggca ttccagctga
     9121 cgttgaacat cgtgacacct tttgtcctgg tcgggttggg attaattttc ccactgctgg
     9181 cgcgtagaaa cacataacga cgctcttttc cacggcgctc ctgtcaggcg agcgcctttt
     9241 aaggttacag gtgcctgggt tccaggcgga gaccacggta ttaacaggcg ccggggcagc
     9301 aatagttgtc agaccttcaa cccagcagca gataagcgac tctgtattta atacctggta
     9361 agcgcaatat tgttaaccag gcctgtctga cggcggggtc gggtatttta gcggtaagag
     9421 cgttacccag acagcaaaac ggctaccgtc atgggtagcc gtttaaaagc ggataagata
     9481 gcaggcgatt aatacatcac tttatgacca tactgctcaa gaataccctt tacacgttcc
     9541 atggtctctt ttttaggcgg cttcacgcca tccagtttat attcttcgcc cattgccacc
     9601 catttatgtt tgcccagctc atgatagggc agcagttcga ttttttcgac attacccata
     9661 tcgcgggtaa actcacccag gcgatgcgcg gaatcatcgt cgtcagacca gccgggaacg
     9721 acaacgtaac ggatccagac cttcacattt ttctttgata aatactgcgc gaattccagc
     9781 gtccggtgat tggatacacc gaccagattc tggtggatct catcattcat ctgcttgaga
     9841 tcgagcatca ccagatcggt aacgtccaac agttcatcaa tcaccgggtc ataacggcgc
     9901 acaaagccgt tggtgtcgag acaggtgtgg ataccttctt ttttacaggc gcgaaaccag
     9961 tcgcgtacaa attctgcctg caaaatggcc tcgccgccgg atgccgtcac gccgccgcca
    10021 gaagcattca taaaatgccg ataggtcacc acctctttca ttaagtcttc aacggtgatt
    10081 tctttaccgc catgcgtatc ccatgtgtcg cggttatggc aatacaggca gcgcatcagg
    10141 cagccctgga aaaaggtaat aaagcggatg cctgggccat caacggtgcc acaggactca
    10201 aaggagtgaa tgcgaccaat aaccggcttt ttatcagcag ttactgcaac actttcattt
    10261 gtaatacaat cggttaagtt actcatatcg cttcggctag ctctaaataa catggggttt
    10321 atggacacat tccgggcatg ttgagcaccc tagtaagggg gttgcatcct gtaaaaaagc
    10381 ggtactgcga gcgtaaattt tggactacag aatgtgtggc tgttccagaa tgtgctgcaa
    10441 tggagctatt ttacctctat tcagtataaa atatacggca aatctatgct gcatagcttg
    10501 caccgccaga aattgtggct cattcatcag ctcgtaacgc ccgaaccgca atacatactg
    10561 taagtgtatc atccatagcg tcctggtttt gctgtttatg aaccgcctct tttttcaaat
    10621 ggttgatgcc gtttttgtgg tcagaacaaa aataattctc aacataattc agatgtgtcc
    10681 aaagaacgtt acgcctgtcc agtgcctggc gttgcattca acgcgcaatc aggtgtaaat
    10741 ctgatgtcat ttctaaaccc ggactgattc aatctcttaa atagagtgtg gttttaatca
    10801 aaaaatgaga gcaacggatt ggattttgct ttcgcggtaa ataatcaaag gagttattat
    10861 gccagttacg ttaagttttg gtaatcgtca taactatgaa gttaatactt cacggctaac
    10921 ccgtttgatg agtcctaata aagaagaagc gctatacatg ggggtatggg atagatttaa
    10981 ggactgcttc agaacacaca aaaaaaagag gtgctggagg tattatatac actcatccat
    11041 ggatgtgaac gtgaaaatca agctgaactt aatgttgata taaccggcat ggagaagata
    11101 catgccttta cacaattaaa acaatatgct aatccatctc aacaagagcg ctttgttatg
    11161 cgttttgata tgaatcagac aaaagtttta tttgagattg atggccaggt tattgataaa
    11221 tgtaatttgc atcgtctcct caacgtttca gaaaactgta tttttagagt gatggaagac
    11281 gatgaagtag agttgttttt taaagtatgt attaagtatg gagaaaaaat tgctcgctat
    11341 ccagaattat tagaaggctt tgctaataaa cttaaagatg cagttaatga ggatgatgac
    11401 attaaggatg aagtttataa ttttatgcga tctggagaag atcgaaaaat ggaatgtgtt
    11461 gaatggaatg gtacgcttac tgaagaggag atgaataaac tacgctgtct tcaaatgggg
    11521 tcttttaata ttactaccca attttgtaaa ataggttact gggaattaga gggagaagtc
    11581 ctgtttgata tggttcatcc aacacttatc tatctgctac acgcatataa accgtcattg
    11641 ttatctgatt taatagaaac taacaccatg ctgttttctg atgtattaaa taaggattat
    11701 gatgagtatc aaaataataa aagagaaatt gattctattc taagaagaat atatagatca
    11761 catgataaca ctttatttat aagtgaaaat tctagttgtc gcaatatgct tatataaaaa
    11821 gtcattaaaa aggccccact gatatggagc cttttttgta cgctttttat ggcgtaattt
    11881 cagtcaaacc cattacatgg tctgcgtgaa ggtacgagta ataacgtcct gctgctgttc
    11941 tttcgtcagg gagttaaaac gtactgcgta accagataca cggatggtca gctgcggata
    12001 tttttccgga tgttccatcg cgtccagcag catttcacgg ttcatgacgt tgacgttcag
    12061 gtgctgaccg ccttcgatgg acgcttcgtg gtggaagtaa ccatccatca gacctgccag
    12121 gttagtctta cgaacttcgt cgtctttacc cagtgcgttc ggaacgatag agaaggtata
    12181 agaaatacca tctttcgcgt aagcaaacgg cagtttagca acggaggtca gagaagcgac
    12241 agcgcctttc tggtcacgac cgtgcatcgg gttagcacct ggtccgaacg gcgcgccagc
    12301 gcgacgacca tccggggtgt taccggtttt cttaccatac acaacgttag aagtgatggt
    12361 cagaacagac tgcgtcggga tagcgccacg gtaggtggtc agtttctgaa ttttcttcat
    12421 gaaacgttct accaggtcaa ccgccatgtc atctacacga gcgtcgttgt taccaaactg
    12481 cgggtattcg ccttcgattt cgaagtcgat agccagacca tcttcgtcac gaatcggttt
    12541 aactttcgca tatttgatgg cagacaggga gtcagccgca acggacagac ctgcgatacc
    12601 acacgccatg gtgcggataa cgtcacggtc gtgcagcgcc atcagagagg cttcgtagct
    12661 gtacttgtcg tgcatgtagt ggataacgtt cagtgcggtg acatactgtt tagccagcca
    12721 gtccatgaag tgatccatgc gatccatcac ttcgtcgaag ttcagaacat cgcctttgat
    12781 cggttcggat ttcggaccaa cctgcatttt cagtttttca tcaacgccgc cgttgattgc
    12841 gtacagcatg gttttcgcca ggtttgcacg cgcgccgaag aactgcattt gtttaccaac
    12901 gatcatcggg cttacacagc atgcgatagc gtagtcatcg ttgttgaagt ccggacgcat
    12961 caggtcatcg ttctcgtact gcagagaaga ggtgtcgatg gagactttag cggcgaactt
    13021 cttgaagttc agcggcagtt tttcagacca cagaacggtg atgttcggct ccggagacgg
    13081 ccccatggtg tacagggtgt tcaggaaacg gaagctgttt ttggtgacca gagtacggcc
    13141 atcaacgccc ataccgccga tagattcggt tgcccaaatc gggtcgccgg agaacagttc
    13201 atcatattcc ggagtacgca ggaagcgaac catacgcagt ttcatgacca ggtggtcaat
    13261 catttcctgt gcgtcttgct cggtgatttt gcctgctttc aggtcacgtt cgatgtacgc
    13321 atccaggaag gtggatacac gaccgaagga cattgctgcg ccgttctgag atttaaccgc
    13381 agccaagtaa ccgaagtaag tccactggat tgcttcctga gcgttagtcg ccgggccaga
    13441 gatatcgcag ccgtatttag ctgccatttc tttgatctga cccagagcgc ggtgctgttc
    13501 agcgatttct tcacgcagac ggatagtcgc ttccagattt acgccgtttt ccagatcgga
    13561 ttgcagagac gtaaactgcg cgaatttgtc tttcatcagg tagtcgatac cgtacagcgc
    13621 tacgcgacgg tagtcaccga tgatacggcc acggccatac gcatccggca gaccggtcag
    13681 cacgccggac ttacggcaac gcaggatgtc cggagtataa acgtcgaata cgccctggtt
    13741 gtgggtctta cggtattcgg tgaagatttt tttgatcatt gggtccagct cgcgattgta
    13801 cgctttgcag gaaccttcaa ccattttgat gccgccaaac gggataatcg cacgtttcag
    13861 cggagcttca gtctgcagac caacaatttt ctcaagcgct ttgttgatgt agccagcgtc
    13921 gtgagaagtg atggtggaag caacggaggt gtcaaagtca acaggcgcgt gagtgcggtt
    13981 ttcctgttta acgccttcca ttacgctgtc ccacagcttg gtggtcgcgt cagtagcgcc
    14041 agccaggaag gactcgtcac cctcatacgg agtgtagttt ttctgaatga agtcacggac
    14101 gtttacttca ttctgccagt cacctttggt aaaaccttcc caggctgtgg ctaacttttc
    14161 attaagctcg gacatgtaac acctaccttc ttaagtggat tttttattta ctgcgtgtaa
    14221 tggacatcaa cagattaatg atgctcgtta ccacgcaggt aaatgaccca gtatgtcaac
    14281 ccgaccaaca aaccgccgcc gataatatta ccgatcgtga ccggaatcag gttatcagtg
    14341 atgaagctca tcacggtcag gtgagaaaaa ctttccggag acgaaccaac cgcggtccaa
    14401 aactccggtg tagcgaaatc gcgtattaca atacccatag gaatcataaa catgtttgcg
    14461 atactgtgct caaaaccgct ggcgacaaac atggcgacgg gcagtaccat gatgaacgct
    14521 ttgtccatca ggctacgacc tgagtagctc atccacacgg ccagacaaac catcaggttc
    14581 gccagaatac cgaggcagac agcttcaata aaagtgtggt gcattttgtg gtcggcggtt
    14641 tgcaggacgt taagtcccca ttgaccgttg gcagtcatat actcgccgga aagccacatc
    14701 agtaacacga aaagcagagc gccaatcagg ttaccaaaat agacgtttaa ccagttttta
    14761 gccagttgtc cccaggtgat gcgaccgcta gctttagcta caacgatcag aacagtagag
    14821 gtgaaaagat cagcgccgca aataacacag agaatcagtc ccaaagagaa acagataccc
    14881 ccgataagtt tcgccatgcc ataaggcatc gcgccagtac cggttgtcgc agtaatataa
    14941 aaaacaaagg caattgaaat gaatacgccg gcggtaatcg ccagatagaa agtcttaagc
    15001 ggatgtttcg ttgctttata gacgcctgct tcttcagcca ctttggccat tgctgcaggg
    15061 agtaaaaggt caaaagggtt gtcagctttc acactaactc tctctttatt aagtcggcga
    15121 cgagatacta acaaagcatt atagatgaga atttgatata gatcatatct cgcctggctt
    15181 ataggcccgt aagtcgcatg gcttttatgc aattacggtg taactttttg attatcctaa
    15241 taaaaataaa ttttaaaaat tataaataga gttgaatttt ttcctggctc ctcctgctgc
    15301 acggttaatt aatatggagt aatcaacaaa taaagcaaca tcattatgtc aattaattta
    15361 atatcaacaa ccaatattta accttgttat tacatttttc gccgtttagt gaaaataaat
    15421 aaaacggggc cgcaaaggcg ccccgtaata taacgcagcc gagagggtaa acctacccta
    15481 agtcactcat atggccttat tttgaccagt atgccgcttt cgcgcgctgt aatttatcat
    15541 acgcttttaa caaggactga tgcgccggga acgcttgtag atcgtggtcg acagccggta
    15601 gtccataaaa agccgcttca ccgctaagcg cggtgctggc ggcttctaca gcctctgcgc
    15661 catacatttt tataaaagca ttgagatatt gcagcggctg acgcgcatct tcttgcgaca
    15721 ggagcagcag cgtttgcagg caacggtaat agtttgcgcg taccggacta aagaccgacg
    15781 aattgaactc catcgtccat tctgtccaga ttagcgcctg ctccaaatcg ccgcccgcta
    15841 acgctagcat tgcttttaat tcgccgacgc gcagtgtata ccaaccattg tccgctccgg
    15901 tcgccagacc caacagttca cgcacgcggg tgaaatcgtc aaaaccttct tcatccaatt
    15961 gttcaatcag attgagatag tcttctttat tccaggcgct accgggcagc gaaagcagaa
    16021 tctcacgaag atggctaccc atattgttgt tggccagcca cagatcttcg gcaggataaa
    16081 tatcagacat tcccggtacg ataatacgac aggcgtatac gccgagatgc tcgtaatcgg
    16141 caatgtaaac ttctttatct tcagcagcga agatggccat cagcgtggcg aattcttctt
    16201 cggtagtgcc ggagaaactc cagtccgtga acgggtaatc ggcgtcctgt ttgaacagat
    16261 cccaggaaat caggccgctg gagtcgatga agtgggtctc cagattagtg tgctccgcga
    16321 cttcttcatc atcgaacgtt ggcggcgtga agacatcaag atctttcaga ccgcgtccct
    16381 ggagtagctc ggtcactgta cgttccagcg caacgccaaa gtcaggatgg gcgccaaaag
    16441 aagcaaagca ggtaccgtta gccgggttga acagcacgac gcagataacc ggatacttac
    16501 cgcccagcga gccgtcatag gcgaaaatcg ggaaaccctc ggcttccagc gtggcgattg
    16561 actccattac cgccggataa cgcgccatca cctctgcggg aatctccggc agactgatac
    16621 tttccgcaat gatgcgattt ttcacataac gctcgaagac ttccgacagt ccctgaacgc
    16681 gggcttcatt acgcgtattg ccggcggaca ttccgttaga gacgtacagg ttgccgataa
    16741 tattcatcgg aatatacacg gtctggttat cggactgacg ggtaaatggc aggccgcaga
    16801 cgccgcgttc ttcattgccg gactgaagat caattaactg gcttccggtg agttcatttt
    16861 ccggatcgta aaacgcgcgc agacgggcat caagcaagcc ttccggtacg tcgtcatttt
    16921 cagtcagcga gaaccacttt tcattcggat aatgcacgaa tggcccgttg gcgatcgttt
    16981 cgccaagcca gaaatcagca aaaaagtagt tggttgacag acgctcgaag tattcgccca
    17041 gcgccgaggc cagcgccgct tttttggtcg cgccttttcc gttggtaaag cataacgcgc
    17101 actctttatc gcgaatatgc actgaccaga cgtttggcac cgggttcagc caggaggcct
    17161 cttcgatgtg aaagccgagg tcgagtaact tttgctggaa gcgggcgatg gagtcttcca
    17221 gcgcggcgtc tttgccggga ataaatgttt gcgtcatgaa aatcactttt gtcgtacgga
    17281 aagcgcgcaa tgatacgggt tttatgtgac gggcgctatc tcgccgggac gtcggcggaa
    17341 ataaaagtat tggctatgct tttacactgg aattcacagg aagagcataa aaaatgaaag
    17401 catttgattt gcaacgaatg gcgctggata acgtgtcggt agcgtttttg ggggaagtgg
    17461 cgctacgtag cttttacacc tttgttctgg tgtttctttt cttaaaggtg acaggacgac
    17521 gcggcgtacg gcaaatgtcg ctttttgaag tgctgatcat tttgacattg ggatcggcgg
    17581 caggcgacgt cgcgttttat gatgacgttc cgatgctccc tgttctggtg gtattcatca
    17641 ccctggcgct gctctatcgc ctagtcatgt ggctgatggc gcatagtgaa aagttggaag
    17701 atctgctgga aggcaagtcg gtggtcattg ttgaagacgg cgaactggcg tgggaaaaac
    17761 tgcagcgctc gaacatgacg gagtttgaat tttttatgga gcttcgcttg aatggcgttg
    17821 agcaactggg gcaggtcaga ctggccatcc tggagacaaa cggacaaatc agcgtctatt
    17881 tctttgaaaa taaagacgtt aagccggggt taagcattct tcctgagcac tgtacgccac
    17941 gctttatcgt ggcgccggag gctggcgact atgcctgcgt acgttgcagt gaagtgatac
    18001 gcatgaatgt cggggagaag caattatgtc cgcgctgcgc aaatccagaa tggacgaagg
    18061 caagccgggc taaacgcgtt gtttaacagc gaaaatatcg gatttatacg gttaatccgg
    18121 aagattctgt tgtgtgacgc atgccgcatt ttctcctcgc attgttttac ccattgcggc
    18181 gcgtgtcact gaatgataaa accgatattc acatgaataa cgtttgcctg atgtctgtca
    18241 ggcaggaaac aatgcagcgt ggtgagggga aatggctcag gtctttaatt ttagttcagg
    18301 tccggcgatg ctaccggcgg aagtacttaa actggcgcaa caggaactgc gtgactggca
    18361 cggtcttggt acgtcggtaa tggaaattag ccatcgaggc aaagagttta tccaggtcgc
    18421 tgaagaggcg gagcaggatt ttcgcgatct ccttaatatc ccctccaact ataaagtttt
    18481 attttgtcac ggcggcggtc gcgggcagtt tgctggcgtg ccgctcaatc tgctgggcga
    18541 taaaaccacg gcggattatg tcgatgccgg ttactgggcg gcgagcgcca tcaaagaagc
    18601 caaaaaatac tgtgcgccgc agattatcga cgccaaaatc accgttgacg gcaaacgtgc
    18661 cgtaaaaccg atgcgcgagt ggcagctttc cgataacgcc gcttatttac actattgccc
    18721 gaatgagacc attgacggca tcgccatcga tgaaacgccg gattttggcc cggaagtggt
    18781 cgtcacggcg gatttttctt ctaccatcct gtctgcgccg ctggacgtct ctcgctatgg
    18841 cgtaatttat gctggcgcgc agaagaatat cggtccggca ggactgacgc tggttatcgt
    18901 ccgggaggat ctgttaggca aggcgcatga gagctgcccg tccatcctcg actacaccgt
    18961 cctgaatgat aacgactcga tgtttaatac accgccgact ttcgcctggt atctttccgg
    19021 tctggtgttc aaatggttga aagcgcaggg cggcgtggcg gcgatgcaca aaatcaatca
    19081 gcaaaaagcg gagttgctgt atggtgtgat tgataacagc gatttctacc gtaacgatgt
    19141 cgcacaggcc aaccgttcgc ggatgaatgt tccgttccag ttagcggaca atgcgctgga
    19201 caaggtcttt ctggaagagt ctttcgccgc tggtctgcac gccttaaaag ggcaccgtgt
    19261 tgttggcggt atgcgcgcct ctatctataa cgccatgccg attgaagggg tgaaagcgct
    19321 gaccgatttc atgatcgatt ttgagcgccg ccacggctaa tacgtttctt ttttcatccc
    19381 cacggccagt ctgtggggtt tttatttctg ttttttgaga gttgagtttc atggaatccc
    19441 tgacgttaca acccatcgcg cgggtcgatg gcgccattaa tttacctggc tccaaaagtg
    19501 tttcaaaccg tgctttgctc ctggcggctt tagcttgtgg taaaaccgtt ctgacgaatc
    19561 tgctggatag cgatgacgtc cgccatatgc tcaatgccct gagcgcgttg gggatcaatt
    19621 acaccctttc tgccgatcgc acccgctgtg atatcacggg taatggcggc ccattacgcg
    19681 cgtcaggcac tctggaactg tttctcggta atgccggaac cgcgatgcgt ccgttagcgg
    19741 cagcgctatg tctggggcaa aatgagatag tgttaaccgg cgaaccgcgt atgaaagagc
    19801 gtccgatagg ccatctggtc gattcgctgc gtcagggtgg ggcgaatatt gattacctgg
    19861 agcaggaaaa ctatccgccc ctgcgtctgc gcggcggttt tatcggcggc gacattgagg
    19921 ttgatggtag cgtttccagc cagttcctga ccgctctgct gatgacggcg ccgctggcgc
    19981 ctgaagacac aattattcgc gttaaaggcg aactggtatc aaaaccttac atcgatatca
    20041 cgctaaattt aatgaaaacc tttggcgtgg agatagcgaa ccatcactac caacaatttg
    20101 tcgtgaaggg cggtcaacag tatcactctc caggtcgcta tctggtcgag ggcgatgcct
    20161 cgtcagcgtc ctattttctc gccgctgggg cgataaaagg cggcacggta aaagtgaccg
    20221 ggattggccg caaaagtatg cagggcgata ttcgttttgc cgatgtgctg gagaaaatgg
    20281 gcgcgaccat tacctggggc gatgatttta ttgcctgcac gcgcggcgaa ttgcacgcca
    20341 tagatatgga tatgaaccat attccggatg cggcgatgac gattgccacc acggcgttgt
    20401 ttgcgaaagg aaccacgacg ttgcgcaata tttataactg gcgagtgaaa gaaaccgatc
    20461 gcctgttcgc gatggcgacc gagctacgta aagtgggcgc tgaagtcgaa gaagggcacg
    20521 actatattcg tatcacgccg ccggcgaagc tccaacacgc ggatattggc acgtacaacg
    20581 accaccgtat ggcgatgtgt ttctcactgg tcgcactgtc cgatacgcca gtcacgatcc
    20641 tggaccctaa atgtaccgca aaaacgttcc ctgattattt cgaacaactg gcgcggatga
    20701 gtacgcctgc ctaattcttc tgttgcgcca gtcgacgggc tggcgcgtcg agtccgtatt
    20761 cgcactattt ttataattat gactaatgct aatttgttgg tgatttaaca cattgattta
    20821 tgtgtttttt ataatagtta tcaacggaag attagtatga aaaataaatc attactactg
    20881 gcggtggcga tttccgccac gctactggca ggatgtaaaa atggcgtgaa tggcaattta
    20941 atcgccagtt ccggcatgtc agcctacaaa gccgccacac tgtccgatgc ggatgttaaa
    21001 gcattatcta ataatgcctg taaacaaatg gacagcgaga atcaactggc aggttcgaaa
    21061 agcaaataca ccaaacgtct gagtaaaatc gctaaagcgc tgggtaacaa cattgacggt
    21121 acgccggtta gctataaagt ctatatgacc agcgatatca acgcatgggc gatggcgaac
    21181 ggttgcgttc gcgtatactc cggcctgatg gatctgatga ccgataatga aattgaaggc
    21241 gtactgggcc atgaactggg ccatgtctct ttagggcact cccgcaaggc aatgcagacc
    21301 gcctatgcca cgctggcggc tcgcgatgcg atttccgcca ccagcggcgt cgcagcgcag
    21361 ctttcccagt ctcaattggg cgatctggcg gaaggcgtca tcaatttggc gttttctcgc
    21421 agtcaggagt cggatgcgga tgacttctct tacaatctgc tgaaaaaacg tgggattaac
    21481 acccagggct tagtcacggc attcgataaa ttcgccataa tggacgcagg tcatgcaaaa
    21541 tcattgatgg actcccaccc ggcctcagcc gatcgcgcgc agcatatgcg cgacagaatt
    21601 gccgaagata aaaagtaaat cattgtcatc tttcgggctg gtttctcgcc agcccgctat
    21661 aattgcgcaa ttattccgca tctgattaca gacaaaactg gtttttgcac gcaacgttaa
    21721 cggtcgcgag cgttggcgcg tataatgcgc ggcgtttacg ttaacggtac gcctgtttaa
    21781 ggagataaag atgacggcaa ttgccccggt aataaccatt gatggcccaa gcggtgcagg
    21841 taaaggcacc ttgtgcaaag caatggcgga agcattgcaa tggcatctgc tggattccgg
    21901 cgcgatatac cgcgtactgg cgctggcggc attgcaccac catgtcgatc tcgcctctga
    21961 agatgcgctg gtgccgctgg cgtcccatct ggacgtgcgt ttcgtctcaa cggacggcaa
    22021 cctggaagtt atcctggaag gcgaggacgt tagcggcgaa attcgtacgc aggaagtcgc
    22081 gaacgcggca tcccaggtgg cggcattccc acgcgtgcgt gaagcgcttc ttcgccgcca
    22141 acgcgcattc cgcgaagcgc ctggtttaat cgccgatgga cgcgatatgg ggaccgtggt
    22201 cttcccggat gcgccggtaa aaattttcct tgacgcctcc tcggaggaac gtgcgcatcg
    22261 acgtatgcta cagttgcagg agaatggctt tagtgttaac tttgaacgcc ttttggccga
    22321 gatcaaggaa cgcgacgatc gcgatcgtaa tcgcgctgta gcgccgttag ttcctgctgc
    22381 tgatgcatta gttttggatt ctacccgatt aagcattgag caagtgattg aaaaagcgtt
    22441 acaatatgcg cgccaaaaat tggctctcgc ttaaatgcga ccgaatttgt agtacccccg
    22501 ttgcaaagga ttgacagcgg gtatgttaaa caaccccatc cggcacggag ccaggtggac
    22561 gttaaatatg aaacctgaag attaaacatg actgaatctt ttgctcaact ctttgaagaa
    22621 tccttaaaag aaatcgaaac ccgcccgggt tccatcgttc gtggtgttgt tgttgctatc
    22681 gacaaagacg tagtactggt tgacgccggt ctgaaatctg agtctgccat tccggctgag
    22741 cagttcaaaa acgcccaggg cgaactggaa atccaggttg gtgacgaagt tgacgttgct
    22801 ctggatgcag tagaagacgg cttcggtgaa actctgctct ctcgtgagaa agctaaacgt
    22861 cacgaagcat ggatcacgct ggaaaaagct tacgaagatg ctgaaactgt taccggtgtt
    22921 atcaacggca aagttaaggg tggcttcact gttgagctga acggtattcg cgcgttcctg
    22981 ccaggttctc tggtagacgt tcgtccggtg cgtgacactc tgcacctgga aggcaaagag
    23041 cttgaattca aagtaatcaa gctggaccag aaacgtaaca acgttgtggt ttctcgtcgt
    23101 gccgttatcg aatccgaaaa cagcgcagaa cgcgatcagc tgctggaaaa cctgcaggaa
    23161 ggcatggaag ttaaaggtat cgttaagaac ctcactgact acggtgcatt cgttgatctg
    23221 ggcggcgttg acggcctgct gcacatcact gatatggcct ggaaacgcgt taagcatccg
    23281 agcgaaatcg tgaacgttgg cgacgaaatc aacgtgaaag tgctgaaatt cgaccgcgag
    23341 cgtacccgtg tatccctggg cctgaaacag ctgggcgaag atccgtgggt tgctatcgct
    23401 aaacgttatc cggaaggtac caaactgacc ggtcgcgtga ccaacctgac cgactacggc
    23461 tgcttcgttg aaatcgaaga aggcgttgaa ggcctggttc acgtttccga aatggactgg
    23521 accaacaaaa acatccaccc gtccaaagtg gttaacgttg gcgacgtagt ggaagtgatg
    23581 gttctggata tcgacgaaga acgtcgtcgt atctccttag ggttgaagca gtgcaaatct
    23641 aacccgtggc agcagttcgc agaaacccac aacaagggcg accgcgttga aggtaaaatc
    23701 aagtctatca ctgacttcgg tatcttcatc ggcctggacg gcggcatcga cggcctggtt
    23761 cacctgtctg acatctcctg gaacgttgca ggcgaagaag cagttcgtga atacaaaaaa
    23821 ggcgacgaaa tcgctgcagt tgttctgcag gttgacgcag aacgtgaacg tatctccctg
    23881 ggcgttaaac agctcgcaga agatccgttc aacaactggg ttgctctgaa caagaaaggc
    23941 gctatcgtaa ccggtaaagt cactgcagtt gacgctaaag gcgcaaccgt agaactggct
    24001 gacggcgttg aaggttacct gcgtgcttct gaagcatccc gtgaccgcgt tgaagatgcg
    24061 actctggttc tgagcgttgg cgacgacgtt gaagctaaat tcaccggcgt tgatcgtaaa
    24121 aaccgcgcaa tcagcctgtc tgttcgtgcg aaagacgaag ctgacgagaa agatgccatc
    24181 gcaactgtta acaagcagga agatgcaaac ttctctaaca acgcaatggc tgaagcattc
    24241 aaagcagcta aaggcgagta atcctctgaa acttcgggcc ttttagtccg aagtataacg
    24301 agattacttg acagattgca ggtttcggcc tgtaatcaag cactaagggc ggctacggcc
    24361 gcccttaatc aatctcacgg ctgcagccaa tttgccttta aggaaccgga ggaatcatga
    24421 ccaagtcaga attgattgaa agacttgcaa cccagcaatc tcacattccc gctaaggcgg
    24481 ttgaagacgc ggtaaaagag atgctggagc atatggcctc gactcttgcg cagggcgagc
    24541 gtattgaaat ccgcggtttc ggcagttttt ctttgcatta ccgcgcgcct cgtaccggac
    24601 gtaaccccaa gaccggcgat aaagtggaac tggaaggaaa atacgttcct cactttaaac
    24661 cgggtaaaga actgcgcgat cgcgccaata tttacggtta agttttaacg caaaacttga
    24721 acccgaaaaa agcaccgtca gggtgctttt ttcatttata cgccgtcagg cgcaaacgct
    24781 attcgaccga aaactggaaa acgtttcgca ttttttgctg cgtcttacat ttatcaggta
    24841 aaaaacctgg aatccgcgcc gtatagcaca aaatcccctc cagacaatgg cgtcctgaac
    24901 ctgcacactt tcccgcacag ggaggtgtct atgaagataa cgacggtcag cgtatgcgta
    24961 gtatgcggca tacttccgct catgatattg ccagtattac ctgatacgtg gattctcgcg
    25021 gtgctgtttt gtctggcatg tttgctttgc ctcatacccc atcactatgc gcgctacgcg
    25081 gcattaacct tgctcttttt catgtggggg atttttgccg ccaggcaggc catctgggtg
    25141 ggaaacgtcc tgcccgccgc gacgcaggag gcgacagtcg tcattactgc caccgatcat
    25201 atgaccactc attatgggcg aattacccat ttgcatggaa agccactctt tcctgctgta
    25261 gggattgtcc tgcatggcca gtacttaccc acggaagtgt gtgccggaca gcagtgggcg
    25321 atgacgctga aggtcagagc ggtacacgga cagcttaacg aaggcggttt tgatagccag
    25381 cgttacgcgc tggcgcagca ccaaccgttg accgggcgtt ttctacaggc taaagcgatt
    25441 aaccctgagt gtagcttgcg tgggcgctat cttgcttcgc ttcgcgctac gcttgcgcct
    25501 tatccgtggc agcaggttat tctggcgttg ggaatggggg agcggggagc ggtgtcgcag
    25561 gaggtgaagg ccgttatgcg cgatacgggg actgcccatt tgatggcgat ttccggcctg
    25621 catatcgctt ttgctgcgtt attggctgcc ggattaatcc gtggcggaca attctttttg
    25681 ccggtcagat ggattcgttg gcagacgcca ttgctgggcg gcattctttg cgcgatatgt
    25741 tatgcctggc ttaccggctt acaaccgcct gcgctgcgca cggtggcggc actgagcgtc
    25801 tggggaggat tgaaattaag cggacgacag tggagcggct ggcaagtctg gtgctgctgt
    25861 ctggccgcga ttattttcgc cgatcctgtg gcggttatat cacaaagtct ttggctgtca
    25921 gcatttgcgg ttgccggcct gttattctgg tatcagtggt ttcctgcgcc aaacggaaat
    25981 tttccacgag gcttacgctg gttgcttaac ctgcttcacc tacaggcagg cattacactt
    26041 ctgcttttgc ctctccaggt ggcgcttttt catggcataa gcgttaccgc aatgctggcg
    26101 aatctttttg ccgtaccttg ggtcacattt gtgacggttc cactcatcct ggcgggaatg
    26161 attctgcatt taaccgggcc gttttttctt gaagagtggg tatggtacct gaccgatcgc
    26221 gcgttagccg cgctatttta cctgttgaat gctttaccgc agggctgggt gaatattgat
    26281 aaccgttggc agtggctgac gcttttaccc tggctaacgc ttatcgcgtg gcgattaaac
    26341 gtctggcgta cctggccggc ggtctgttta tgcgggttat tgttgatgag ctggccactc
    26401 tggcggccga taaacgccag cggatggcag gtgcatatgc tggatgtcgg tcaggggctg
    26461 gcgatagcga tcgtcagggg cgataaagta atactctacg ataccggtcg ggcatggccg
    26521 gagggcgaca gcgggcaaca ggttattatt ccctggttgc gctggcataa tctgacgccg
    26581 gagggcgtta ttttgagtca tgagcatctg gatcatcggg gcgggctgcg ttcgctacag
    26641 caggtctggc cgtcaatgtg gattcgcagc ccgttaggct ggcagggaca tttgccctgt
    26701 tttcgcggcg agcagtggca atggcagggg ctaacgtttc aggcgcactg gccgttacgc
    26761 gaaagtgccg atcgaggaaa taaccgttct tgtgtggtca aagtggatga cggtgtacat
    26821 agcatcctgc tcacgggcga tatcgaagcg ggcgctgaac aaaaaatgct aagtcgttac
    26881 tggcgacatc ttgcggcgac gtttatccag gtgccgcatc atggtagtaa tacgtcgtcg
    26941 tcgttaccat ttattcagcg cgtacatggt gaagcggcgc tggcgtccgc atcgcgctat
    27001 aacgcatggc ggctgccgtc ccgcaaggta aaacagcgct accgacagca ggcgtatcag
    27061 tggtttgata caccccacca ggggcaaatt tcgctgctgt tttctccgca gggctggcgc
    27121 atacaaggct tacgggatca aattttacct cgctggtatc atcagtggtt tggcgtgtcc
    27181 gaggataacg ggtagaatat gcggctattt caacaaatgc tggttttttg aatgcataac
    27241 gataaagatc tctctacgtg gcagaccttc cgccgactgt ggccaaccat agcgcctttt
    27301 aaagcaggtc tgatcgtggc gggcatagcg ttaattctca acgcagccag cgataccttc
    27361 atgctatcgc tcctcaagcc attactggat gatggtttcg gtaaaacgga tcgctcagtg
    27421 ttgctgtgga tgccgctggt ggttattggg ctgatgatat tacgaggcat cactagctat
    27481 atctccagct actgtatttc atgggtgtca ggcaaggtgg taatgaccat gcgccgtcgc
    27541 ctgtttggcc atatgatggg aatgcccgtc gccttctttg ataaacagtc taccggtacg
    27601 ctgctgtcgc gtattacata cgattcagaa caggttgcct cttcttcatc tggcgcgctg
    27661 attaccgtgg tgcgtgaagg ggcatcgatc atcggattgt ttattatgat gttctattac
    27721 agctggcagc tgtcgatcat cctggttgtt ttagcgccga ttgtgtcgat tgcgattcgc
    27781 gttgtctcaa agcggttccg cagcatcagt aaaaatatgc agaacacgat gggacaagtg
    27841 actaccagcg ctgaacaaat gctgaaagga cacaaagagg tactgatttt cggcggtcag
    27901 gaagtcgaaa ctaaacgctt tgataaagtc agcaataaga tgcgactgca aggcatgaaa
    27961 atggtctctg cctcgtcaat ttccgatcct atcattcagc tcattgcctc gctggcgctg
    28021 gcgtttgttc tctatgctgc gagcttccca agcgtaatgg atagcctgac ggcagggacc
    28081 atcacggtgg tgttctcctc catgatcgcg ctgatgcgtc cattaaaatc gctgacaaac
    28141 gttaacgcgc agttccagcg tgggatggcg gcttgtcaga cgttgtttgc gattctggac
    28201 agcgaacagg agaaagatga aggtaaacgt gtcattgacc gcgcgaccgg cgatctcgaa
    28261 ttccgcaatg tgacgtttac ttacccgggc cgtgaagtgc cggcattgcg taacatcaat
    28321 ttgaaaattc ctgccgggaa aaccgtggcg ctggtggggc gttccggatc gggtaaatca
    28381 actatcgcca gtctgatcac ccgtttctac gatattgatg aaggacacat cctgatggat
    28441 ggtcacgatc tacgcgaata cactctggcc tctctacgta atcaggtggc gctggtttcg
    28501 caaaacgtgc atctgtttaa cgacacggtc gccaataaca ttgcttatgc ccggacggaa
    28561 gaatacagcc gcgagcagat tgaagaggcg gcgcgcatgg cctatgccat ggactttatc
    28621 aacaagatgg ataatggtct ggataccatt atcggcgaaa acggcgtact gctttccggc
    28681 ggtcagcgcc agcgtatcgc gattgcccgc gccttactgc gcgacagccc gattctgatc
    28741 cttgatgaag ctacgtccgc gctggatacc gagtccgaac gtgcgattca ggccgcgttg
    28801 gatgagctgc aaaaaaaccg tacctctctg gtgattgcgc accgtctctc caccatcgaa
    28861 caggcggatg agatcgttgt agtcgaagac ggtattatcg ttgagcgcgg cactcatagc
    28921 gagctgctgg cgcaacacgg cgtttacgcc cagctgcata agatgcaatt tggccaatga
    28981 ttgcgcgtat ctggtcgggt gaatccccgc tatggcggtt actgctgccg ctctcctggc
    29041 tgtatggcct ggtgagcggg gcgattcgtc tgagctataa gcttggtttg aaacgcgcct
    29101 ggcgagcgcc ggtaccggtg gttgtggtag ggaatcttac ggctggcggt aacggtaaaa
    29161 cacccgtagt catttggctg gtggaaaagc tgcaacagcg tggcgtgcgc gtgggggtcg
    29221 tttcccgcgg ctacggcggg aaagctgccg cttatccgct gctcctgacg cctgagacga
    29281 caaccgcaga agcgggaga
//
LOCUS       DAGWFR010000033        28892 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.033, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000033 DAGWFR010000000
VERSION     DAGWFR010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 28892)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28892)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28892
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.033"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..666)
                     /locus_tag="MOX77_001557"
     CDS             complement(<1..666)
                     /locus_tag="MOX77_001557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462574.1"
                     /note="catalyzes the formation of L-xylulose 5-phosphate
                     and 3-dehydro-L-gulonate 6-phosphate from L-xylulose or
                     3-dehydro-L-gulonate, respectively; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate kinase"
                     /protein_id="HCA3357124.1"
                     /translation="MSNYWLGLDCGGSWLKAGLYDGAGREVAVQRLPLHALSPQPGWV
                     ERDMTELWQQCASVISKLLTHTGVSGSQIRGLGISAQGKGLFLLDKSDRPLGKAILSS
                     DRRAMEIVQRWQKEAVPQKLYPLTRQTLWTGHPVSLLRWVKENEPQRYAQIGSVMMTH
                     DYLRWCLTGVKGCEESNISESNLYNMATGQYDPRLTEWLGISEIDSALPPVVGSAEIC
                     GEIT"
     gene            complement(670..1656)
                     /locus_tag="MOX77_001558"
     CDS             complement(670..1656)
                     /locus_tag="MOX77_001558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HCA3357125.1"
                     /translation="MKLHVIARSLLIAGLTVFSVSSLAAQSLRFGYETPQTDSQHIAA
                     KKFNELLKEKTNGELTLKLFPDSTLGNAQAMISGVRGGTIDMEMSGSNNFTGLAPVFN
                     LLDVPFLFRDTSHAHKTLDGKVGDELKKSLDSKGLKVLAYWENGWRDVTNSRAPVKTP
                     GDLKGLKIRTNNSPMNIAAFKIFGANPIPMPFSEVYTGLETRTIDAQEHPINVVWSAK
                     FYEVQKYLSLTHHAYSPLLLVINKAKFDALSPQFQEALLSSAKEAGDYQRKLVAEDQQ
                     KIIDGMKEAGVEVLTDIDRKAFSDALGSQVRDMFLKDNPQGADLLKAVDEVQ"
     gene            complement(1668..2945)
                     /gene="yiaN"
                     /locus_tag="MOX77_001559"
     CDS             complement(1668..2945)
                     /gene="yiaN"
                     /locus_tag="MOX77_001559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diketo-L-gulonate transporter large permease
                     YiaN"
                     /protein_id="HCA3357126.1"
                     /translation="MAVVIFLCCLLGGIAIGLPIAWSLLLCGAALMAYLDMFDVQIMA
                     QTLVNGADSFSLLAIPFFVLAGEIMNAGGLSKRIVDLPMKLVGHKPGGLGYVGVIAAM
                     IMASLSGSAVADTAAVAALLVPMMRSANYPINRSVGLIASGGIIAPIIPPSIPFIIFG
                     VSSGLSISKLFMAGIAPGIMMGAALMLTWWWQAGRLNLPSQPKATPREIWYSLVSGIW
                     ALFLPVIIIGGFRSGLFTPTEAGAVAAFYALFVAVVIYRELTFSSLYHVLVNAAKTTS
                     VVMFLVAAAQVSAWLITIAELPMIVSDLLQPLVDSPRLLFIVIMISIMVVGMVMDLTP
                     TVLILTPVLLPLVKEANIDPIYFGVMFIINCSIGLITPPVGNVLNVISGVAKLKFDDA
                     VRGVFPYVVVLMSLLVLFIFIPELIITPLKWIN"
     gene            complement(2948..3421)
                     /gene="yiaM"
                     /locus_tag="MOX77_001560"
     CDS             complement(2948..3421)
                     /gene="yiaM"
                     /locus_tag="MOX77_001560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diketo-L-gulonate TRAP transporter small
                     permease YiaM"
                     /protein_id="HCA3357127.1"
                     /translation="MKRVLEGILAVLIAVLSCIVFINVILRYGFESSILSVDELSRYL
                     FVWLTFIGAIVAFMDNAHVQVTFVVEKLSPANQRRLSLLTHSLILLLCIALGWGSLQK
                     ALQDWSDHSPILGLPIGLMYIACLPTSVAIALIELRRLYHLITRNDSFQQPQQGA"
     gene            complement(3560..4492)
                     /locus_tag="MOX77_001561"
     CDS             complement(3560..4492)
                     /locus_tag="MOX77_001561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4862 family protein"
                     /protein_id="HCA3357128.1"
                     /translation="MKNNTGYIIGAYPCAPSFHQKSEEEETEFWRQLSDTPDIRGLEQ
                     PCLEHLHPLGDEWLLRHTPGNWQIVVTAIMETMRRRSENGGFGLASSDEEQRKACVEY
                     YRHLHQKINKINGNNTGKVIALELHAAPLAGNPNVAQATDAFARSLKEIANWDWSCDL
                     VLEHCDAMTGPAPRKGFLPLVNVLETIADYDISVCINWARSAIEGRDTSLPLIHTQQA
                     KQAGKLGALMFSGTTLDGEYGEWQDLHAPFAPFCPQSLMTEKHVKELITAAAPELLQF
                     TGIKLLEINASADINHRINILRDGINMMKKATRR"
     gene            complement(4516..4980)
                     /locus_tag="MOX77_001562"
     CDS             complement(4516..4980)
                     /locus_tag="MOX77_001562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhcH/YjgK/YiaL family protein"
                     /protein_id="HCA3357129.1"
                     /translation="MIFGHIAQPNPCHLPAAIEKALHFLRTTDFRTLEPGVVEIDGKN
                     TFAQIIDMTTRDAAENRPEVHRRYLDIQFLAWGEEKIGVAIDTGNNQISESLLEQRDI
                     IFYHDSEHESFIEMIPGSYALFFPQDVHRPGCNKSIATPIRKIVVKVAIDVL"
     gene            complement(4992..5990)
                     /gene="yiaK"
                     /locus_tag="MOX77_001563"
     CDS             complement(4992..5990)
                     /gene="yiaK"
                     /locus_tag="MOX77_001563"
                     /EC_number="1.1.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydro-L-gulonate 2-dehydrogenase"
                     /protein_id="HCA3357130.1"
                     /translation="MKVTFEELKGAFYRVLRSRNIAEDTADACAEMFARTTESGVYSH
                     GVNRFPRFIQQLDNGDIIPDAKPQRVTSLGAIEQWDAQRAIGNLTAKKMMDRAIELAS
                     DHGIGLVALRNANHWMRGGSYGWQAAEKGYIGICWTNSIAVMPPWGAKECRIGTNPLI
                     VAIPSTPITMVDMSMSMFSYGMLEVNRLAGRELPVDGGFDDNGQLTKEPGVIEKNHRI
                     LPMGYWKGSGLSIVLDMIATLLSNGSSVAEVTQENSDEYGVSQIFIAIEVDKLIDGAT
                     RDAKLQRIMDFITTAERADDNVAIRLPGHEFTKLLDDSRCNGITIDDSVWAKIQAL"
     gene            6220..7020
                     /gene="yiaJ"
                     /locus_tag="MOX77_001564"
     CDS             6220..7020
                     /gene="yiaJ"
                     /locus_tag="MOX77_001564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator YiaJ"
                     /protein_id="HCA3357131.1"
                     /translation="MSQNNDKEKPAGSQSLFRGLMLIEILSNYPNGCPLAHLSELAGL
                     NKSTVHRLLQGLQSCGYVTPAPAAGSYRLTTKFIAVGQKALSSLNIIHVAAPHLEALN
                     LATGETVNFSSREDDHAILIYKLEPTTGMLRTRAYIGQHMPLYCSAMGKIYMAFGQPD
                     YVASYWESHKDQIQPLTRNTITDLPAMYDELAQIRETSMAMDREENELGVSCIAVPVF
                     DIHHRVPYAISISLSTSRLKQIGEKNLLKPLRETAQAISNELGFTVRE"
     gene            7137..7610
                     /locus_tag="MOX77_001565"
     CDS             7137..7610
                     /locus_tag="MOX77_001565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HCA3357132.1"
                     /translation="MNRFIMADASACIGCRTCEVACVVSHQEQQNSAAVTTADFVPRI
                     RVIKEDSFTTATVCHQCEDAPCANVCPVQAIRRDRGHIFVTPSRCIGCKSCMLACPFG
                     AMTVVASASGAQAIKCDLCWHREAGPACVEACPTSALQCVDATHVQRQRLYSQPF"
     gene            complement(7647..8897)
                     /gene="avtA"
                     /locus_tag="MOX77_001566"
     CDS             complement(7647..8897)
                     /gene="avtA"
                     /locus_tag="MOX77_001566"
                     /EC_number="2.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--pyruvate transaminase"
                     /protein_id="HCA3357133.1"
                     /translation="MTFSLFGDKFTRHSGITRLMEDLNDGLRTPGAIMLGGGNPAHIP
                     AMQDYFQTLLTEMVESGKAADALCNYDGPQGKTALLNALAVLLRETLGWDIEPQNIAL
                     TNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELL
                     PEGQFKYHVDFEHLHIGEETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVID
                     NAYGVPFPGIIFSEARPLWNPNIILCMSLSKLGLPGSRCGIIIANDKTITAIANMNGI
                     ISLAPGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHK
                     PEGAIFLWLWFKDLPITTELLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYV
                     PEPDKIEAGVKILAEEIERAWREG"
     gene            complement(9071..11098)
                     /locus_tag="MOX77_001567"
     CDS             complement(9071..11098)
                     /locus_tag="MOX77_001567"
                     /EC_number="3.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase"
                     /protein_id="HCA3357134.1"
                     /translation="MKLAAFALTLIPGIAIASSWTSPGFPTLSTQETGRFTSHAALTK
                     GTRALTLHIDQQCWQPSGAIKLNQMLSLKPCEGAPPQWRLFKDGDYTITVDTRSGTPT
                     LLLSIKTEPERTTQLAYQCPVWDGSPLTLDVRQTFPEGTVVRDYYSGQIDTVQNGKIT
                     LLPADSHGLLLLERAETHASAPFNWRNATVYFVLTDRFRNGDPTNDHSYGRHKDGMQE
                     IGTFHGGDLRGLTSQLDYLQQLGVNALWISSPFEQIHGWVGGGTKGDFPHYAYHGYYT
                     QDWTTLDANMGSEADLRALVDGAHQRGIRILFDVVMNHAGYATLADMQEYQFGALYLS
                     GAERQKILGDRWTNWRPAAGQSWHSFNDYINFSDSAAWEKWWGKKWIRTDIGDYDSPG
                     FDDLTLSLAFLPDIKTESTTPSGLPVFYANKPDTKAKFIEGYTPRDYLTHWLSQWVHD
                     YGIDGFRIDTAKNVELPAWQQLKTQASAALHEWKQANPDKALDDSPFWMTGEAWGHGV
                     MKSDYYRYGFDAMINFDYQEQAAKAVDCLAEMGPVWQQMADKMQDFNVLSYLSSHDTR
                     LFREGGDKAAELLLLSPGAVQIFYGDESARPFGPTGSDPLQGTRSDMNWQDVSGKSAA
                     AVAHWQRISQFRARHPAIGAGQQTTLTLKHGYGFVRQYGDDTVMVVWAGRR"
     gene            11414..12238
                     /locus_tag="MOX77_001568"
     CDS             11414..12238
                     /locus_tag="MOX77_001568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein bax"
                     /protein_id="HCA3357135.1"
                     /translation="MILTPMRRYGAMILMLLTIAFSGEVLAKTRATQTSQKSHITETS
                     YKQVSSKQEYSRNSAKSSSLPDLRKYPSGTPRKKAFLRTVMPYITSQNAAITADRNWL
                     ISKQYQNRWSPSERARMKDIAKRYKVSWSGNTRRIPWNTLLERVDIIPTSMVATMAAA
                     ESGWGTSKLARSNNNLFGMKCTKGRCTNTPGKVKGYSQFASVEESVSAYVANLNTHPA
                     YSSFRKSRAQLRKADQEVTATAMIHKLKGYSTQGARYNNYLFAMYQDNQRLIAAHM"
     gene            complement(12299..13477)
                     /locus_tag="MOX77_001569"
     CDS             complement(12299..13477)
                     /locus_tag="MOX77_001569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XylR family transcriptional regulator"
                     /protein_id="HCA3357136.1"
                     /translation="MFDKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEED
                     FRARIDNIKEWLGDGVIADYDDDDIAQLLADVDVPIVGVGGSYHLAENYPAVHYIATD
                     NHALVESAFLHLKEKGVNRFAFYGLPDSSRKHWAAEREYAFRQLVAEEKYRGVVYQGL
                     ETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARARHVLQACEHLHIPVPEKLCVIGI
                     DNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLAREEMPLQRILVPPVRVIARRS
                     TDYRSLTDPAVIQAMHFIRNHACKGIKVEQVLDAVGISRSNLEKRFKEEVGETIHALI
                     HAEKLEKARSLLISTTLAINEISQMCGYPSLQYFYSVFKKEYVTTPKEYRDQHSEALL
                     "
     gene            13840..15162
                     /gene="xylA"
                     /locus_tag="MOX77_001570"
     CDS             13840..15162
                     /gene="xylA"
                     /locus_tag="MOX77_001570"
                     /EC_number="5.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xylose isomerase"
                     /protein_id="HCA3357137.1"
                     /translation="MQAYFDQLDRVRYEGPQSTNPLAFRHYNPDELVLGKRMEDHLRF
                     AACYWHTFCWNGADMFGVGAFNRPWQQPGEALELAKRKADVAFEFFHKLNVPFYCFHD
                     VDVSPKGASLKEYKNNFAQMVDVLAAKQEQSGVKLLWGTANCFTNPRYGAGAATNPDP
                     EVFSCAATQVVTAMNATHKLGGENYVLWGGREGYETLLNTDLRQEREQIGRFMQMVVE
                     HKHKMGFQGTLLIEPKPQEPTKHQYDYDVATVYGFLKQFGLEKEIKVNIEANHATLAG
                     HSFHHEIATAIALGIFGSVDANRGDAQLGWDTDQFPISVEENALVMYEILKAGGFTTG
                     GLNFDAKVRRQSTDKYDLFYGHIGAMDTMALSLKIAARMVEDGELDKRVAKRYAGWNG
                     ELGQQILKGQLSLGELAQYAEQHHLAPVHQSGHQELLENLVNRYLFDK"
     gene            15262..16716
                     /gene="xylB"
                     /locus_tag="MOX77_001571"
     CDS             15262..16716
                     /gene="xylB"
                     /locus_tag="MOX77_001571"
                     /EC_number="2.7.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xylulokinase"
                     /protein_id="HCA3357138.1"
                     /translation="MYIGIDLGTSGVKAILLNEQGDVLATHTEKLTVSRPHPLWSEQE
                     PEQWWQATDRAVKGLGRQQSLSGVRALGIAGQMHGATLLDSRQQVLRPAILWNDGRCS
                     EECAWLEKQVPQSRAITGNLMMPGFTAPKLVWVQRHEPDIFYQIDKVLLPKDFLRLRM
                     TGVFASDMSDAAGTMWLDVKKRDWSDVMLNACHLTRQQMPALFEGSDITGTLLPEVAS
                     AWGMPAVPVVAGGGDNAAGAVGVGMIDAGQAMLSLGTSGVYFAVSDGFLSKPESAVHS
                     FCHALPERWHLMSVMLSAASCLDWAAKLTGQENVPALIAAAQQADEHADSIWFLPYLS
                     GERTPHNNPQAKGVFFGLTHQHGPAELARAVLEGVGYALADGMDVVHACGVKPASVTL
                     IGGGARSEYWRQMLSDISGLQLDYRTGGDVGPALGAARLAQIAVNKQTPLADVLPQLP
                     LEQAHYPDAQRHAVYQQRRETFRRLYQQLLPLMS"
     gene            16891..17244
                     /locus_tag="MOX77_001572"
     CDS             16891..17244
                     /locus_tag="MOX77_001572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YiaA/YiaB family protein"
                     /protein_id="HCA3357139.1"
                     /translation="MDDHVARRKRIFGLGMLVVGAVVYLVGLWPGCHTLSEKGYFFAA
                     IVMCGFPVLIRQEHTGNDRLLSRCKSLLLLGIGMVAVGVFNLALAGALKILCLVALGV
                     SIYGTDLYASYSDDE"
     gene            complement(17267..18261)
                     /locus_tag="MOX77_001573"
                     /pseudo
     CDS             complement(17267..18261)
                     /locus_tag="MOX77_001573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462558.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
     gene            18427..18729
                     /locus_tag="MOX77_001574"
     CDS             18427..18729
                     /locus_tag="MOX77_001574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HCA3357140.1"
                     /translation="MIMKYFCTVMIAIALVGCTATPPPTQKAQQSKVSPTRTLDMEAL
                     CKAQAAQRYNTGAQKIAVTGFEQFQGSYEMRGNTFRKESFVCSFDADGQFLHLSMR"
     gene            18868..19779
                     /gene="glyQ"
                     /locus_tag="MOX77_001575"
     CDS             18868..19779
                     /gene="glyQ"
                     /locus_tag="MOX77_001575"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HCA3357141.1"
                     /translation="MQKFDTRTFQGLILTLQDYWARQGCTIVQPLDMEVGAGTSHPMT
                     CLRALGPEPMATAYVQPSRRPTDGRYGENPNRLQHYYQFQVVIKPSPENIQELYLGSL
                     KELGMDPTIHDIRFVEDNWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECKLVT
                     GEITYGLERLAMYIQGVDSVYDLVWSDGPLGKTTYGDVFHQNEVEQSTYNFEYADVDF
                     LFTCFEQYEKEAQQLLALENPLPLPAYERILKAAHSFNLLDARKAISVTERQRYILRI
                     RTLTKAVAEAYYASREALGFPMCNKDK"
     gene            19789..21858
                     /gene="glyS"
                     /locus_tag="MOX77_001576"
     CDS             19789..21858
                     /gene="glyS"
                     /locus_tag="MOX77_001576"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001291772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HCA3357142.1"
                     /translation="MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGT
                     VQWFAAPRRLALKVANLAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITV
                     DQAERLTTDKGEWLLYRAYVKGESTEALLPNMVATSLAKLPIPKLMRWGASDVHFVRP
                     VHTVTLLLGDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIAD
                     YEERKAKIKADAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEA
                     LVYTMKGDQKYFPVYANDGKLLPNFIFVANIESKDPQQIISGNEKVVRPRLADAEFFF
                     NTDRKKRLEDNLPRLQTVLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAGLL
                     SKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC
                     ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAV
                     RLYGDKLTNASVVDDVIDFMLGRFRAWYQDEGYSVDTIQAVLARRPTRPADFDARMKA
                     VSHFRTLEEASALAAANKRVSNILAKATEPLNDIVHASVLKEAAEIELARHLVVLRDK
                     LQPYFADGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQV
                     ADISLLQ"
     gene            22455..22676
                     /locus_tag="MOX77_001577"
     CDS             22455..22676
                     /locus_tag="MOX77_001577"
                     /inference="COORDINATES: protein motif:HMM:NF024729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HCA3357143.1"
                     /translation="MSRKGNCLDNACAEFFFGTLKSESFYTSKFKDIDELKIAIEDYI
                     RYYNTRRISLRFNGLSPVEYRLKSYPGRN"
     gene            22818..23285
                     /locus_tag="MOX77_001578"
     CDS             22818..23285
                     /locus_tag="MOX77_001578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HCA3357144.1"
                     /translation="MKIRRFSNGDEISLFRVFFSSVHTIASHYYTREQIDAWAPADID
                     LERWANHIKELQPFVVELDGEIAGYADVQPNGYIDHFFVSGTYSRQGVGTLLMNCIHE
                     EARQRGISELTSNVSKAAEVFFLRHGFHIVERGFPICRGVTLQNALMRKCLAK"
     gene            23463..23750
                     /locus_tag="MOX77_001579"
     CDS             23463..23750
                     /locus_tag="MOX77_001579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1778 domain-containing protein"
                     /protein_id="HCA3357145.1"
                     /translation="MLYKGCLMKSDVQLNLRAKESQRALIDAAAEILHKSRTDFILET
                     ACRAAENVILDRRVFNFNDEQYEEFINLLDAPVADDPVIEKLLARKPQWDV"
     gene            23738..24223
                     /locus_tag="MOX77_001580"
     CDS             23738..24223
                     /locus_tag="MOX77_001580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HCA3357146.1"
                     /translation="MGRVTAPEPLSAFHQVAEFVSGEAVLDDWLKQKGLKNQALGAAR
                     TFVVCKKDTKQVAGFYSLATGSVNHTEATGNLRRNMPDPIPVIILARLAVDLSFHGKG
                     LGADLLHDAVLRCYRVAENIGVRAIMVHALTEDAKNFYIHHGFKSSQTQQRTLFLRLP
                     Q"
     gene            complement(24594..25133)
                     /gene="cueP"
                     /locus_tag="MOX77_001581"
     CDS             complement(24594..25133)
                     /gene="cueP"
                     /locus_tag="MOX77_001581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-binding periplasmic metallochaperone
                     CueP"
                     /protein_id="HCA3357147.1"
                     /translation="MSKSSWLLLLGLCASGSALAASSESAFLAQHGLAGKTVEQIVDT
                     IDQTPQSRPLPYSASITSTELKLSDGEQIYTLPLGDKFYLSFAPYEWRTHPCFNHSLS
                     GCQGEMPNKPFTVKVTDSKGAVIVQKEMQSYRNGFIGVWLPRNMEGTLEVSYNGKTAS
                     HAIATRDDSQTCLTELPLR"
     gene            complement(25309..25521)
                     /gene="cspA"
                     /locus_tag="MOX77_001582"
     CDS             complement(25309..25521)
                     /gene="cspA"
                     /locus_tag="MOX77_001582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone/antiterminator CspA"
                     /protein_id="HCA3357148.1"
                     /translation="MSGKMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKS
                     LDEGQKVSFTIESGAKGPAAGNVTSL"
     gene            complement(25734..26099)
                     /locus_tag="MOX77_001583"
     CDS             complement(25734..26099)
                     /locus_tag="MOX77_001583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000455793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator"
                     /protein_id="HCA3357149.1"
                     /translation="MEYKDPMFELLSSLEQIVFKDETRKITLTQKPNPFTEFEQLRRG
                     TGLKTDEFARALGVTVAMVQEWESKREKPTPAELKLMRLIQANPRLSKQLMEQFLPLS
                     VLTVLRKGRFPRPITGLEK"
     gene            26538..27248
                     /locus_tag="MOX77_001584"
     CDS             26538..27248
                     /locus_tag="MOX77_001584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3053 domain-containing protein"
                     /protein_id="HCA3357150.1"
                     /translation="MATGKSCSRWFAPVVALLMVFSLSGCFDKEGDQRKAFVDFLQNT
                     AMRSGERLPTLTADQKKQFGPFVSDYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQ
                     DYMTQREPLRQANGSLGVLAQQLQNAKLQADAAHGALKQADDLKPVFDQVYKKVVTVP
                     ADALQPLIPAAQIFTQQLVQVGDYIAQQGEQVSFVANGIQFPTSQQASQYNALIGPLA
                     SQHQAFNQAWTAAVNATQ"
     gene            complement(27298..28272)
                     /gene="ghrB"
                     /locus_tag="MOX77_001585"
     CDS             complement(27298..28272)
                     /gene="ghrB"
                     /locus_tag="MOX77_001585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxylate/hydroxypyruvate reductase GhrB"
                     /protein_id="HCA3357151.1"
                     /translation="MKPSIILYKTLPDDLLHRLEAHFTVTQVPNLHPETVARHAQAFA
                     SAQGLLGTSETVNRALLEKMPALRAASTISVGYDNVEVDALTARKIVLMHTPAVLTET
                     VADTVMALMLATARRVVDVAERVKAGEWTESIGPAWFGVDVHHKTLGIVGMGRIGMAL
                     AQRAHFGFTMPVLYHARRRHQEAEDRFNARYCDLDTLLQEADFVCVILPLTAETRHLF
                     GATQFARMKSSAIFINAGRGPVVDENALIAALQNGEIYAAGLDVFEQEPLSVDSPLLN
                     MSNVVAVPHIGSATHETRYNMMACAVDNLIDALQGKIEKNCVNPQAAG"
     gene            complement(28491..>28892)
                     /locus_tag="MOX77_001586"
     CDS             complement(28491..>28892)
                     /locus_tag="MOX77_001586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HCA3357152.1"
                     /translation="LRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTL
                     TGVAMVLKEYPKTAVNVVGYTDSTGSHDLNMRLSQQRADSVASSLITQGVDASRIRTS
                     GMGPANPIASNSTAEGKAQNRRVEITLSPLQ"
BASE COUNT         7009 a         7209 c         7692 g         6982 t
ORIGIN      
        1 ggtgatctcc ccgcatattt cggctgaacc caccacgggg ggcagcgcgc tatcgatttc
       61 actgatgccc agccattcgg tcaggcgcgg gtcgtactgg cccgtcgcca tgttgtagag
      121 gttggactcg gagatattgc tctcctcaca gcctttcacg ccggttaagc accagcgcag
      181 atagtcatgc gtcatcatga cgctgcctat ctgcgcgtag cgctgcggct cattctcttt
      241 tacccagcgt aaaagggaga ccggatgccc ggtccacagg gtttgccggg tcagtgggta
      301 gagtttttgc ggaaccgctt ctttttgcca gcgctggaca atttccatgg cgcgacgatc
      361 ggaagagagt atcgctttac ctaatggccg atcgctttta tctaacagga acaggccttt
      421 cccttgggct gaaataccca gaccgcggat ttgtgagccg ctcacccccg tgtgcgtcag
      481 cagtttgctg atgaccgaag cgcactgttg ccacagttcg gtcatatcgc gttcaaccca
      541 gcctggctgc gggcttaaag cgtgcagcgg caggcgttgc accgctactt cccggcctgc
      601 gccatcgtac aacccggctt ttagccaact cccaccacaa tctaacccca gccagtaatt
      661 gctcatgact tattgcacct cgtccacggc tttcaggagg tcggcgccct gcgggttgtc
      721 tttcaggaac atatcgcgca cctggctgcc cagcgcatca ctgaaggctt tacggtcgat
      781 atcggtcagg acttcaactc cggcttcttt catgccatcg ataatttttt gctgatcttc
      841 ggcgaccagt ttgcgctggt agtcccccgc ttctttggcg gaactcagca gtgcctcctg
      901 gaactgcggg cttaaagcgt cgaatttggc tttattgatc accagcagca gaggcgaata
      961 ggcgtgatga gtgagggaga ggtatttctg tacctcatag aatttcgctg accacacgac
     1021 gttgataggg tgttcctggg catcaatcgt acgggtttcg aggccggtat agacttcgga
     1081 gaatggcatc ggaatagggt tcgcgccgaa gattttaaag gccgcgatat tcattggact
     1141 gttgttagtg cggattttta agcctttcaa atcgcccggc gtttttaccg gcgcgcggga
     1201 gttggtgacg tcgcgccagc cgttttccca gtaggcgagg acttttaacc cttttgaatc
     1261 gagtgatttt ttcagttcat cgccgacttt accgtcgagc gttttatgcg catgcgaggt
     1321 atcgcgaaac aggaagggga catcaagtaa gttgaataca ggggccaggc cggtgaaatt
     1381 gttcgaaccg gacatttcca tatcaatagt tccgccgcgc accccgctga tcattgcctg
     1441 agcgttacct aatgtgctgt caggaaagag ttttagcgtt aattcgccgt tggttttttc
     1501 ttttaataat tcgttaaatt ttttcgcggc aatatgttgg gagtcagttt gcggtgtttc
     1561 ataaccaaaa cgtaaagatt gcgccgccag agacgacacg ctgaaaaccg tcagaccagc
     1621 tatcaataat gaacgagcaa taacgtgtaa tttcataata ttatccttta attaatccat
     1681 ttaagcggtg tgataattag ctcgggaata aaaataaata aaaccagcag cgacatcagt
     1741 acgacaacgt aagggaatac gcctcttacc gcgtcatcaa atttcaattt tgctaccccg
     1801 gaaataacgt tgaggacgtt gccaacgggc ggtgtgatta atccaataga gcagttaata
     1861 atgaacatga cgccgaaata aatcgggtca atattggctt ctttaactaa tggcaataat
     1921 acaggggtaa gaattaacac cgttggcgtc aaatccatca ccataccgac gaccataatt
     1981 gagatcataa tgacgataaa taagagtcgc ggagagtcga ccagcggctg cagcaaatct
     2041 gacactatca tgggtaattc cgcgatcgta atcagccagg cggatacctg ggccgcggcc
     2101 accagaaaca tgacgactga cgtcgttttg gcggcattga ccagcacgtg gtagagactg
     2161 gaaaacgtta attcccgata gataaccacg gcgacaaaga gggcgtaaaa cgcggcgacc
     2221 gcccctgcct ccgttggcgt gaaaagtccg gaacggaagc cgccgatgat aatcaccggt
     2281 aaaaacagcg cccagatacc tgaaaccaat gaataccaga tttcacgcgg tgttgcttta
     2341 ggctgagaag ggagatttaa tcgcccggcc tgccaccacc aggtgagcat aagcgccgcg
     2401 cccatcatga tgcccggtgc gatcccggcc ataaacagct tgctgatcga caagccgctg
     2461 gaaacgccga agataataaa aggaatcgag gggggaataa ttggcgcaat gatcccgccg
     2521 gaagcgatta acccaacgga gcggttgatc gggtagtttg cggagcgcat catcggcacc
     2581 agcagcgcgg cgaccgcagc ggtatctgct accgcagagc cggaaaggct ggccataatc
     2641 attgccgcaa taacgcccac gtagcccagg ccgccgggct tatggccgac cagcttcatc
     2701 ggcaggtcga caattcgctt tgacaggccg cccgcgttca tgatttcacc ggccaaaaca
     2761 aaaaagggaa tggccagtag ggagaaactg tccgcgccgt taaccagggt ttgcgccata
     2821 atctgcacgt caaacatatc caggtatgcc atcagagcag cgccgcaaag cagcagcgac
     2881 caggcgatgg gtaaacctat cgcgatcccg ccgagcaggc agcagagaaa tatcaccacg
     2941 gccatgatta ggctccttgc tgtggttgtt gaaaggaatc gttacgcgtt attaagtgat
     3001 aaagccgacg cagctcgatt aacgcgatgg caacgcttgt gggcagacag gcgatataca
     3061 tcaggccgat cggtaaaccg aggattggcg agtgatcgct ccagtcctgc aacgcttttt
     3121 gcaggctgcc ccagcctaat gcgatgcata acaataaaat cagcgaatgt gtcagcagcg
     3181 agagtcgacg ctgattcgct ggcgaaagtt tttccaccac aaaagtgacc tgaacgtgag
     3241 cgttatccat aaatgcaacg atggcgccaa taaacgtcag ccatacaaat agataacgtg
     3301 atagttcatc taccgacaaa atactgctct caaaaccgta acgtaaaata acgttaataa
     3361 atacaatgca ggaaagtacg gcaattaata ccgcaagtat gccctcaagt acccgcttca
     3421 taacgactcc atcaggttat agaaacttat ttctttcgat gctgaatagt ggaacttaat
     3481 ttcttatgtt tggtttatat taggtcggcg caacgttgag ttgcaggccg agaattaagg
     3541 tgatgatgtt taattcaggt tagcggcgtg tggccttttt catcatgtta ataccatcgc
     3601 gtaatatatt tatgcggtga ttaatatcgg cactggcatt gatttccaac aatttaatac
     3661 cggtaaactg caacagttcg ggagcggcgg cggtaatcag ttctttaaca tgtttctccg
     3721 tcatcagact ttgtggacag aaaggtgcaa acggagcatg gaggtcctgc cattcgccgt
     3781 attctccatc cagcgttgta ccggagaaca tcagcgcccc gagttttcca gcctgtttgg
     3841 cctgctgcgt gtggatcagc ggtagagagg tatcccgccc ttcaatagcc gagcgcgccc
     3901 agttaatgca gacgcttatg tcatagtcgg caatagtttc cagtacgttt accaacggta
     3961 agaatccttt gcgcggtgcg gggccggtca tcgcgtcgca gtgttcaagc accaggtcgc
     4021 aggaccagtc ccagttggca atctctttta atgagcgcgc aaaggcgtcg gttgcctgcg
     4081 ccacgttcgg attgcccgcc agaggagcgg catgaagctc aagggctatg actttgccgg
     4141 tattgttccc attgatttta ttgatcttct gatgcagatg acgatagtac tccacgcagg
     4201 ctttacgctg ttcctcgtca ctggacgcta atccaaaacc gccgttttcg ctacggcgac
     4261 gcatggtttc cattatcgcg gtgaccacga tttgccagtt tcccggtgta tggcgcaata
     4321 accactcgtc gccgagcggg tgaagatgtt caagacaagg ctgctccagc ccccggatat
     4381 ccggagtatc agagagttgc cgccagaatt ccgtctcttc ctcttcactc ttctggtgaa
     4441 atgagggtgc acaagggtac gcaccgataa tataaccggt attatttttc attttgtgct
     4501 ccagtaaact ctattttata aaacgtctat ggcgactttt acgactattt tccgtatcgg
     4561 cgtagcaatg cttttattac aaccgggacg atgaacatcc tgcgggaaaa acagggcata
     4621 acttcccggt atcatttcaa tgaatgattc atgttcactg tcgtgataaa aaataatatc
     4681 gcgctgttct aataatgact cgctgatttg attattaccg gtatcaatgg caaccccaat
     4741 tttctcttca ccccatgcca gaaactgaat atccagatag cggcgatgga cttccggacg
     4801 attttcagca gcatcgcggg tggtcatatc gataatctgc gcgaaggtat ttttgccgtc
     4861 gatttccact acgccgggtt ccagcgtgcg aaagtcggtg gtacgtaaaa agtgaagcgc
     4921 tttctcgatc gcggctggca aatgacatgg atttggctgc gcgatatgtc caaaaatcat
     4981 gatgtggctc cttacagcgc ctggatttta gcccagacgc tgtcgtcaat ggtgataccg
     5041 ttacagcggc tgtcatccag caatttggta aattcgtggc cgggcagccg aatcgcgacg
     5101 ttgtcgtcag cacgttcagc agtggtgatg aaatccataa tccgctgcag tttggcatcg
     5161 cgggttgcgc catcgatcag cttatccact tctatggcga tgaaaatctg cgaaacgcca
     5221 tactcatcgc tgttttcctg ggtcacttcg gcaacggaag agccgttgga aagcagggtg
     5281 gcaatcatgt ccagcacaat cgacagacca gatcctttcc agtaacccat cggtaaaatg
     5341 cggtgatttt tctcgatcac gcccggttct ttggtcaact gaccgttatc gtcgaaaccg
     5401 ccgtccaccg gcagttcgcg gcccgccaga cggttaactt ctaacatccc gtaggagaac
     5461 atcgacatcg acatatctac catcgtgatc ggcgtagacg ggatggcgac gatcagcgga
     5521 ttggtaccga tacggcactc tttcgcgccc cacggcggca tgacggcgat ggagttggtc
     5581 cagcaaatgc cgatatagcc tttttccgcc gcctgccagc cgtagctgcc gccgcgcatc
     5641 cagtggttag cattacgtaa cgccaccagg ccaataccat gatcggaagc cagctcgatg
     5701 gcccggtcca tcatcttttt cgccgtcagg ttgccgatag cgcgctgagc atcccactgt
     5761 tcgatggcgc cgaggctggt aacccgctgc ggtttagcat caggaataat gtcgccgtta
     5821 tccagttgct ggatgaagcg gggaaagcgg ttcacgccgt gggaatagac accggactcg
     5881 gtggtgcgag cgaacatttc cgcgcaggcg tcggcggtat cttccgcaat attccgcgac
     5941 cgcaagacgc ggtagaaggc cccttttaac tcttcgaaag ttactttcat ccctgttctc
     6001 ctggtcgatt gttagaaatt ttagtatgtt tttttgtcga taaatttcat aatgcgaaat
     6061 gtagttccaa atatatagat caaaaattga catggcaacg ccagagaagc tttttaaaaa
     6121 cgattaaaat catcgggtta tgttttttat gctgatatcg tgaactgcaa cacactttga
     6181 gctaccatct gatcgcccaa gaaaggagag agttttctga tgagccagaa caacgataaa
     6241 gagaagcctg cggggagtca gagcctgttt cgtggcctga tgttgataga aattttgagt
     6301 aactacccga acggttgccc actggcgcac ctgtcggagc tggcggggtt gaacaagagt
     6361 accgtccatc gtttgttgca ggggcttcaa tcctgcggat acgtgacgcc agcgccggcg
     6421 gccggaagct accgtctgac gacaaagttt attgccgtcg gccaaaaagc cctgtcatcg
     6481 ctgaatatca tccacgttgc ggcaccgcac cttgaggcgc tcaacctggc caccggcgag
     6541 acggtgaatt tttccagccg tgaagatgat cacgctatcc tgatttataa gctggaaccg
     6601 accaccggta tgctgcgcac gcgtgcctac attggccagc atatgccgct gtactgctcg
     6661 gcgatgggga aaatttatat ggcgtttggt cagccggatt atgtggcgtc ttactgggaa
     6721 agccataaag atcagatcca gccgctgact cgtaatacca ttaccgattt accagcaatg
     6781 tacgatgagc tggcgcaaat tcgtgaaacc agcatggcga tggatcgcga agaaaatgaa
     6841 ctgggcgttt cctgtattgc tgtgcctgtg tttgatattc accatcgagt gccttacgcc
     6901 atttctattt cactgtcgac gtcacggcta aaacagatcg gcgagaaaaa tctgctcaaa
     6961 ccgttgcgtg aaaccgcaca ggctatctct aatgagctgg gatttaccgt tcgcgaataa
     7021 gacagctcgc caggttttat caggcatctg acaaaatttg tccgtttgcg tagtgggatc
     7081 aaagcggcgg ggaatggctc tctggcattc tggcgtttta acgcaggggg agaacaatga
     7141 accggtttat tatggcggat gcgtcggcgt gtatcgggtg tcgtacctgc gaggtcgcct
     7201 gcgtggtgtc gcaccaggaa cagcagaata gcgcggcggt gacgacggcg gactttgtgc
     7261 cgcgtatccg ggtgataaaa gaggatagct tcaccacggc cacggtctgc catcagtgtg
     7321 aggacgcgcc gtgcgcgaat gtctgcccgg tacaggcgat tcgccgtgat cgggggcata
     7381 tcttcgtgac gccatcgcgc tgcattggtt gtaaaagctg tatgctggct tgcccgtttg
     7441 gcgcgatgac tgtggtggcg tccgcgtcag gcgcgcaggc gattaaatgc gatctttgct
     7501 ggcatcggga agcggggccg gcgtgcgtgg aagcctgccc gaccagtgcg ttacagtgcg
     7561 ttgacgcaac acacgtgcag cgccagcgcc tctattctca acctttctga acatcgttcc
     7621 ggcctgcata atggccggaa taaccgtcag ccttcacgcc aggcgcgttc tatctcttct
     7681 gccagaattt ttacgcccgc ctcgatttta tccggttcag gcacgtagtt catccgcata
     7741 cactggtgtg tgtgcggcca gggtttatcc agtccgggaa agaaatagtg gcccggcacc
     7801 atcagcacgc cgcgcgcttt caagcgttga tagagtagct cggtggtaat cggcagatct
     7861 ttaaaccaca gccacaaaaa tattgcgcct tctggtttat gaatcaggca gcgttcttcg
     7921 gataaatagc gacgaatgat cgcgatcgtc tgttgaacgc gctgatagta gaaaggtttg
     7981 ataaccgttt ccgacagccg cagcagatcg ttacgcttaa tcatttcgca catcatcgcc
     8041 gggcccatgc ccccgggcgc aaggctgatg atgccgttca tgttggcaat ggcggtaatc
     8101 gtcttatcat tggcgatgat aatcccgcag cgggaaccgg gcagccccag ctttgagagg
     8161 ctcatgcata ggataatatt ggggttccac agcgggcgcg cctcgctaaa gataatgccc
     8221 ggaaacggta caccgtaagc gttatcaatc accagtggga tgttgtgctg attcgccagt
     8281 ctgtccagct tcatcagctc ttcgtcggtg ataacgttac cggttgggtt ggtcgggcgc
     8341 gagacgcaaa tcatccccgt ttcttcgccg atgtgcagat gctcaaaatc gacgtgatac
     8401 ttaaactggc cttccggcag cagctcaata ttcgggcgcg ccgaaacgaa gaggtcgtct
     8461 tccagaccgg aatccgcata gccgatgtat tccggcgcaa gcgggaatag tacctttttc
     8521 gtactgccgt cggcgcgacg tccggcgaag agattaaata agtagaaaaa cgcgctctga
     8581 ctgccatttg ttagcgcaat attctgtggt tcgatatccc atcccagcgt ttcacgtagc
     8641 agtacggcca gtgcattcag tagcgccgtt tttccctggg gaccgtcata attacaaagc
     8701 gcatcagcgg ctttgccgct ttctaccatc tctgtcagta gcgtctggaa ataatcctgc
     8761 attgcaggga tgtgtgccgg gttaccgccg ccaagcatga tggcgcctgg cgtgcgtaag
     8821 ccgtcgttga gatcctccat caggcgggta atgcctgaat ggcgggtaaa tttatcgccg
     8881 aaaagtgaaa atgtcataac gggtgatcta tcgaactgtc tgtcaaagtg gataaccata
     8941 acgctacaaa tggcggggcg caaatggggg acaggcggtg gtattgatgt tttatgctac
     9001 aaatttttat cagtttagtt ttttattttg aagaggttac cggtacgcga ggggaccggt
     9061 agcgccacga ttagcggcgg cccgcccaga cgaccatcac cgtatcgtcg ccgtactggc
     9121 gtacaaaacc gtacccgtgt tttagcgtca gcgtggtttg ttggcctgcg ccgatggcgg
     9181 gatgtctggc gcggaactgg ctaatacgct gccagtgcgc gacggctgcg gctgactttc
     9241 cgctcacgtc ctgccagttc atatcagaac gggtgccttg cagcgggtcg gagccggtgg
     9301 ggccgaaggg acgagcggat tcatcgccgt aaaagatctg caccgcgcct ggcgaaagca
     9361 gcagcagttc cgccgcctta tcaccgccct cacggaaaag gcgcgtatca tgcgaggaga
     9421 ggtaacttaa tacgttgaaa tcctgcattt tatccgccat ctgctgccag actggcccca
     9481 tttccgccag gcaatcgacc gctttcgccg cctgctcctg ataatcaaaa ttgatcatcg
     9541 cgtcgaaacc atagcgataa taatcacttt tcatgacgcc gtggccccac gcttcgccag
     9601 tcatccagaa cgggctatca tccagcgctt tgtccggatt ggcctgcttc cattcatgta
     9661 acgccgcgct ggcctgggtt tttagctgtt gccaggcagg aagctcaacg tttttggcag
     9721 tatcgatccg gaacccgtca atgccgtaat catgcaccca ctggcttaac cagtgagtca
     9781 gataatcccg tggcgtatag ccctcaatga actttgcttt agtatcgggt ttgttggcat
     9841 agaacacggg taggccggaa ggcgtggtag attccgtttt tatatccggc aggaaggcca
     9901 gcgacagggt taaatcgtca aatcccggac tgtcgtagtc gccaatatcg gtacgaatcc
     9961 actttttccc ccaccatttt tcccaggcgg cgctgtcgct gaagttgatg tagtcgttaa
    10021 agctgtgcca gctttgtccg gcggccggtc gccagtttgt ccagcgatcg ccgagaattt
    10081 tttgccgttc cgcgccggat aaatagagcg cgccgaactg atactcctgc atatccgcca
    10141 gcgtggcgta accggcatga ttcattacta cgtcaaataa aatacggatg ccgcgctggt
    10201 gcgcgccgtc gaccagcgcg cggagatcgg cttcgctgcc catattggca tccagcgtcg
    10261 tccagtcctg agtgtaatag ccgtgatagg cgtaatgagg aaaatcgcct tttgttccgc
    10321 cgccgaccca gccgtggatc tgttcaaacg gcgagcttat ccacaaggcg ttcacgccta
    10381 attgctgtag atagtccagt tgactcgtca acccgcgcaa atcgccgccg tggaaagtgc
    10441 caatctcttg cataccatcc ttatggcgac cataactgtg gtcgttggtt ggatcgccat
    10501 tgcgaaagcg atccgtaagc acaaaataaa cggtggcgtt gcgccagtta aaaggcgctg
    10561 acgcatgggt ttccgcgcgt tccagcaata aaagcccgtg gctgtcggca ggtagcagcg
    10621 tgatttttcc gttttggacg gtatcgattt gaccactgta ataatcgcgc actaccgtcc
    10681 cttccggaaa ggtttggcga acatccagcg tgagcggcga accatcccag acgggacact
    10741 ggtaggcgag ctgcgtggtg cgttcaggtt cagtttttat cgataacaac agggtcggcg
    10801 taccggatcg ggtatctacc gttatcgtat agtcgccatc tttaaacaga cgccattgcg
    10861 gcggcgcgcc ttcgcagggt tttaacgaca acatttggtt gagttttata gcgccggagg
    10921 gctgccagca ctgctggtca atatggagcg ttaacgcgcg tgtacctttt gttaatgcag
    10981 catggctggt aaagcgtccg gtttcctgcg tcgagagcgt cggaaaaccg ggcgaggtcc
    11041 atgatgaggc gatcgcgata ccgggtatca gcgtcagagc gaaggcggca agtttcatca
    11101 cgctatcctt tgtgggcaat attcatcagc ttgcctggtt tttaggcgaa tgaactcctc
    11161 cccagcagag agtcgcgcag gaggaggcgc gagggtgagc gacgaggcgc aaaaaaacgc
    11221 ctctatttgc gataaacgcc gcattttatt ggcattattg ctgtctgtta tcgttaatag
    11281 ttgacatagt ttcggattaa gactattccc tgaggtgctt tttaagccta tttttgctag
    11341 aatttggggt tcaaacctca acttcgtgaa aaataaaagg tgttggaatg tatcaatccg
    11401 accaggagac ctaatgatat tgactcccat gcgacgatat ggggcaatga ttcttatgtt
    11461 actcaccatc gcattttcgg gtgaggtgct ggcaaagacg cgcgcaacac aaacgagtca
    11521 aaagtcccac ataactgaga caagttataa acaggttagc agtaaacaag agtattctcg
    11581 caatagtgca aagagcagtt cacttcctga tttgcgaaaa tacccttccg gaacccccag
    11641 aaaaaaagcg tttctccgga ccgttatgcc ttacatcacc agccaaaatg ccgcgattac
    11701 cgcggaccgt aattggctga tctcaaaaca gtaccagaac cgctggtcgc cgtctgagcg
    11761 cgcgcgtatg aaagatatcg cgaagcgcta taaagtgagc tggtccggca acacgcgtcg
    11821 tattccgtgg aatacgttgc tggagcgcgt cgacattatc ccaaccagca tggtggcgac
    11881 gatggcggcg gcggaaagcg gctggggaac ctctaaactg gcgcgtagca acaataacct
    11941 gttcggcatg aagtgcacga aagggcgttg taccaatacg ccgggtaagg tgaaaggtta
    12001 ctcgcaattc gcgtcggttg aggagtcggt gagcgcgtat gtcgccaacc tgaacacgca
    12061 tccggcttat tcttctttcc gcaagtcgcg cgcccaactg cgtaaggcgg atcaggaagt
    12121 caccgccacg gcgatgattc ataagctaaa gggttactct acccaggggg cgcgctataa
    12181 caactacttg ttcgcgatgt accaggacaa ccagcgtctg atcgccgcgc atatgtaatt
    12241 ctgtgtgccg gatggcgcta cgctatccgg cttacaaggc atctgtaggc tggataaact
    12301 acaacaacgc ttcactatgc tggtcgcgat actccttagg cgtagtgacg tactcctttt
    12361 taaacaccga atagaaatat tgcagcgacg ggtagccgca catttgcgaa atttcgttta
    12421 tcgccaacgt ggtggaaatc aacaaactac gcgctttttc cagcttttcg gcgtggatca
    12481 gcgcatgtat cgtctcgcca acttcttcct taaaacgttt ttccaggttt gaacgtgaaa
    12541 tcccaaccgc gtccagcacc tgctcgactt taatgccctt acaggcatgg ttacgaataa
    12601 agtgcatcgc ctggataacc gccggatcgg tcagggagcg atagtctgtc gagcggcgcg
    12661 caatgacgcg caccggcggc accagaatgc gctgtaacgg catctcttcg cgcgccagca
    12721 aacggtgcag cagcttcgcc gcctgatagc ccatttgccg cgccccctgc gcgacggagg
    12781 aaagcgcgac gcgcgacaga taacgggtta actcttcgtt atcaataccg ataacgcaaa
    12841 gtttttccgg caccggaata tgcaggtgtt cgcaggcctg caatacgtga cgggcgcggg
    12901 catccgttac ggcaatgatg ccggtttgcg gcggcagcgt ctgaagccag tcggcgaggc
    12961 gattttgcgc gtgctgccag ttttccggcg cggtttccag cccctgatag actacgccgc
    13021 ggtatttttc ctcggcgacc agctggcgaa aggcgtattc ccgttccgcc gcccaatgtt
    13081 tgcggctgga gtcgggcaaa ccgtaaaacg cgaagcggtt aacgcctttt tcttttaaat
    13141 gcaggaaagc gctttcaacg agcgcatgat tatcggtggc gatgtaatga acggcgggat
    13201 aattttcagc aagatggtaa gaaccgccga ccccgacaat gggtacgtcg acatcggcca
    13261 ataattgcgc gatatcgtca tcatcgtaat cggcaataac gccgtcgcct aaccactctt
    13321 taatgttatc gatacgggca cggaaatctt cctcaataaa tatatcccat tcggattgcg
    13381 aggcttgtaa atattcaccc accccctcca ctacctgacg gtcataggct ttattcgcgt
    13441 taaataacag agtgatacgg tgacgtttat caaacatgag gatatatcct gcaaaagtga
    13501 acctggactc atggatacta tcaaaacggc tgacataacg gtctggcgaa tgatgacaaa
    13561 ttattttgcg cctgaaacgt tatgcgaaat tcatcacagc aaacggcgga tgacaattgt
    13621 catttcttat ctatatatta cggttttttg tttatttgcc aggattcgat cgcgatcgct
    13681 tttttcttct gtggttttca gcgttttttt gagagccaga gcacatttgg ggattctctt
    13741 aatagcggtg tgaaataacg taattgagca ataaatcagg aaattccagt atgacgttat
    13801 gtcgtttact tgccgtctta tctgattatg gagctcacta tgcaggctta ttttgaccaa
    13861 ctcgatcgtg ttcgctatga aggccctcaa tcgactaacc cgctggcatt tcgtcattac
    13921 aatcccgacg agctggtttt aggtaaacgt atggaagatc acctgcgttt cgcggcctgt
    13981 tactggcata ccttctgctg gaacggcgcg gatatgtttg gcgtaggcgc gtttaatcgt
    14041 ccgtggcagc aaccgggcga agcgctggag ctggcgaaac gcaaagcgga cgtggcgttt
    14101 gaatttttcc acaaactgaa tgtgcctttt tactgcttcc atgacgtgga tgtgtcgccg
    14161 aaaggcgcgt cgttgaaaga atataaaaac aacttcgcgc agatggtgga tgtgctggcg
    14221 gcgaaacagg agcagagcgg cgtaaaactg ctgtggggaa cggcgaactg ctttaccaac
    14281 ccgcgctatg gcgcaggcgc cgccactaac ccggacccgg aagtctttag ctgtgcagcg
    14341 acgcaagtgg ttacggcaat gaacgccacg cataaactgg gcggcgaaaa ttacgtactg
    14401 tggggcggac gcgaaggtta tgaaacgttg ctgaataccg atctacgcca ggaacgcgaa
    14461 cagattggcc gctttatgca aatggtggtt gagcacaaac ataaaatggg tttccagggc
    14521 acgctgctga ttgaaccgaa accgcaggaa ccgacaaaac atcagtatga ttatgacgtt
    14581 gcaacggtct atggcttcct caaacagttc ggcctggaaa aagagatcaa agtgaacatt
    14641 gaggcgaacc acgccacgct ggcgggccat tcgttccacc atgaaatcgc aaccgctatc
    14701 gcgctgggta tttttggctc cgttgatgcc aaccgcggcg atgcgcaact gggctgggat
    14761 accgatcagt tcccgattag cgttgaagag aacgcgctgg tgatgtacga aatcctgaaa
    14821 gcgggcggat tcacgacggg cggtctcaac ttcgacgcca aagttcgtcg ccagagcacc
    14881 gataaatacg atctgttcta cggtcatatc ggcgcgatgg atacgatggc gttgtcactg
    14941 aaaatcgccg cgcgtatggt cgaagacggc gagttggata aacgcgtggc gaagcgctat
    15001 gccggctgga atggcgagct ggggcagcag attctgaaag gacaactctc cttaggcgaa
    15061 ctggcgcagt atgcggagca gcaccatctg gcgccggtac atcaaagcgg tcatcaggag
    15121 ctgttagaaa atctggttaa ccgttatctg tttgataaat aactctatct accgggcgac
    15181 tccgcgttag cccggcctgt agtcgtgatt agcccggtaa gcgtagcgct gccgggcgct
    15241 ttcagtaaag gaacccacac tatgtatatc gggatcgatc ttggtacatc gggtgtaaaa
    15301 gctatcctgt tgaatgagca gggcgatgtg ctggctacgc atactgaaaa actgaccgta
    15361 tcgcgtccgc atcccttatg gtcggaacag gaaccagagc agtggtggca ggcgacggat
    15421 cgtgcggtta aaggtttagg tcggcaacag tcgttaagtg gcgtccgggc gttgggcatc
    15481 gccggacaaa tgcatggcgc gacattactt gatagccgtc agcaggttct gcgaccagcg
    15541 attttatgga atgacggacg ctgtagcgaa gagtgcgcct ggctggaaaa acaggtgccg
    15601 cagtcgcgag cgataaccgg taatctgatg atgcccggtt ttaccgcgcc caaattagtt
    15661 tgggtgcagc gccacgaacc ggatattttc taccagatag acaaggttct gctgccgaaa
    15721 gattttctgc ggctgcgaat gacaggcgtc tttgccagcg atatgtcgga tgcggcggga
    15781 acgatgtggc tggacgtgaa aaagcgcgac tggagcgacg ttatgctcaa cgcctgtcat
    15841 ttaacccgac agcagatgcc agcgttattt gaaggtagtg acattaccgg aacgttgctg
    15901 ccagaggtcg ccagcgcatg gggaatgcca gcagtacctg tggtggcagg cggcggcgac
    15961 aatgcggctg gcgcggtcgg cgtaggaatg atcgatgccg gacaggcgat gctctcactc
    16021 ggaacatcgg gcgtctattt tgccgtcagc gacggctttc tgagtaaacc ggagagcgca
    16081 gtacacagtt tttgccatgc gctgccggaa cgctggcatt taatgtctgt gatgttgagc
    16141 gccgcctctt gtctggactg ggcggctaaa ctcaccgggc aggagaacgt cccggcgctg
    16201 attgccgccg cacagcaggc ggatgagcat gccgattcga tctggttttt gccgtacctg
    16261 tccggcgagc gcacgccgca taataatccg caggcaaaag gcgttttctt tggtttaacc
    16321 catcagcatg gcccggcgga actggcgcgg gcggtactgg aaggcgtggg atatgctttg
    16381 gcggacggta tggatgtggt tcacgcctgc ggcgtcaaac ccgccagcgt gacgcttatc
    16441 ggcggcggag cgcgcagcga atactggcgt cagatgctat ctgatattag cgggctacag
    16501 cttgattatc gtactggcgg cgatgtaggg ccagcgctgg gcgcggcgcg tctggcgcaa
    16561 attgcggtga ataaacagac tccgctcgcc gatgtattgc cgcagttgcc gctggagcag
    16621 gcgcattatc ctgatgcgca gcgtcatgcg gtttatcaac aacgtcgtga aaccttccgt
    16681 cgactctatc agcagctgtt gccgttgatg tcataagtca gaatgccttt cagttttggc
    16741 tgaaaggcat ttcccgtaaa tattgattct attgaattat atcgaagtaa gtatgtgtgt
    16801 tttctgattt ttatattatt gctgagcagg cgcctttttc atcgctattt cttcgcttaa
    16861 tgtgtctcac tcaaccacaa ggagagtgag atggacgatc acgttgcacg caggaaacgg
    16921 atattcggcc tgggaatgtt agttgtcggt gcagtggtat acttggtggg attgtggcca
    16981 ggctgtcata cattaagcga aaagggatat ttttttgcgg caatcgtcat gtgcggtttt
    17041 ccagtcttaa ttcgccagga acacacgggg aatgaccgct tgctttctcg ttgtaaatct
    17101 ttgctgttgc ttggcatcgg catggtcgcg gtcggcgtat ttaacctggc gctggcgggc
    17161 gcgctgaaaa tactgtgtct ggtggcgctg ggggtcagta tatatggaac cgatctttac
    17221 gcttcctaca gtgatgatga atgatggccg gagccatcat tgtcgtttag ctaacccatt
    17281 tccgtttatc aatacgctgt aacagcatgg aaagtagcag gcttcctgtc accgtcgcgg
    17341 caaaaaccca cacgatgtct aacggcggcc aacgttttaa ttccagacca ttagtacgta
    17401 gcgcatggat aatcagcgcg tggaaaccat aaatacccag cgagtggcgg gagataagcc
    17461 ccagtctagg taacgtccgc gcattcagct tatttttaac taccgtgaac agtgagacgg
    17521 cgcaaataaa caccatggga ccgcaataca gataccaggt atcggcaaaa tttccgcgcc
    17581 agcgtaattc atgcaatgtg ccgcgagaaa taacaaatac cgcgatgatg aacagggcag
    17641 cgcagataag cgtcagcgat ggcttttgcg tctccatcat tccaatggcg cggcccagga
    17701 taccgtagag aatgtagtag aacgtgtcgc cgctgatata cagattgatg ggcaaccatt
    17761 caacgccgcc gattttttgc ggcacagtat ttgggttagc aataatacca atgatcacca
    17821 tcagcatcag gagcattttg ccgctcacgt tttttacctg gattaatggc gataccaggt
    17881 agatcaccgt aatcgcaaag aaaaaccaca ggtggtaaaa cacgggtttt tgcagcgcat
    17941 tttttagcga aagctcgacg ttgatcgaag taaaaagtga aatgtaagcc agggcgacaa
    18001 cgctgtaaaa gataaggcac agggcaatac gtaaaaaatg ccgcggttgc gcgcagcgct
    18061 cgccaaaaaa agatagcctg aaatcataaa aaacagggga acgctaacgc gcgaagccga
    18121 attcaggaca ttcgcaatat cccagtttag cgggctgacg ctgtgggcgt tggtgatgta
    18181 ccacgttgta gtatggatca tcactaccat taaacaggcg atccctcgca ggttatcaat
    18241 ccagttaatt ttaggctgca tcagttcctc agcttccgtt tcaatagagt tccagcgcgg
    18301 tggctcactg gaaaaatccg actttctacg ctacatcttg tgatggcgta aggagattcg
    18361 cacaatgttt ctgttaccca caaaccttaa taataagact gaccagcaaa ccagacggta
    18421 ataaaaatga taatgaagta tttctgtact gtgatgatag ccatcgctct ggtgggatgc
    18481 acagcgacac cgccaccgac gcaaaaagcc cagcagagta aagtgagccc aacacgcacg
    18541 ctggatatgg aagcattgtg taaagctcag gcggcgcagc gttacaacac tggcgcacag
    18601 aaaattgctg ttaccggctt cgaacagttt caggggagct atgagatgcg tggtaatacc
    18661 ttccgtaaag agagttttgt ctgctctttt gatgcagatg ggcagttttt acatctttct
    18721 atgcggtaaa agccgcgcct ggtgaggtgt gatgccgcga aatccggtaa ttttcgctaa
    18781 acaaaccggt ttcatactgt atatctcgca tccagcgggt atactggctc cttcctttaa
    18841 atccacacgt atccagcacg aaataatatg caaaagtttg ataccaggac cttccagggc
    18901 ttgatcctga ccttacagga ttactgggct cgccagggct gtaccattgt tcaaccattg
    18961 gacatggaag tcggcgcggg aacttctcat ccaatgacct gcctgcgcgc gctggggcca
    19021 gagccgatgg cgactgccta tgtgcagcct tctcgtcgtc cgaccgatgg ccgctacggc
    19081 gaaaacccga accgcttaca gcactactat cagttccagg tagtgattaa gccgtctccg
    19141 gagaatattc aggagctgta cctcggttct ctgaaagagc tgggtatgga cccgaccatt
    19201 cacgacatcc gtttcgtgga agataactgg gagaacccga cgctgggtgc ctggggactc
    19261 ggctgggaag tgtggctgaa tggcatggaa gtgacgcagt tcacctactt ccagcaggtc
    19321 ggcggcctgg agtgcaagct ggtgaccggt gaaatcacct acggtctgga acgtctggcg
    19381 atgtatatcc agggcgtgga cagcgtttac gacctggtct ggagcgatgg cccgctgggt
    19441 aaaactacct acggcgacgt gttccatcaa aacgaagttg agcaatccac ctataacttt
    19501 gaatacgccg atgtggattt cttattcacc tgcttcgagc agtatgagaa agaagcccag
    19561 cagctactag cactggaaaa cccgctgccg ctgccggcct acgagcgtat tctgaaagcc
    19621 gcccacagct tcaacctgct ggatgcgcgt aaagccatct ccgtcaccga gcgtcagcgt
    19681 tacattttgc gcattcgcac cctgacaaaa gcagtggcag aagcatacta cgcttcccgt
    19741 gaagccctcg gcttcccgat gtgcaacaaa gataagtaag aggcggctat gtctgagaaa
    19801 acttttctgg tggaaatcgg cactgaagag ctgccaccaa aagcactgcg cagcctggct
    19861 gagtcctttg ctgcgaactt tactgcggag ctggataacg ctggcctcgc acacggcacc
    19921 gttcaatggt ttgctgctcc gcgtcgtctg gcgctgaaag tagctaacct ggcggaagcg
    19981 caaccggatc gtgaaatcga aaaacgcggc ccggcgattg cccaggcgtt cgatgctgaa
    20041 ggcaaaccga gcaaagcagc agaaggctgg gcgcgtggtt gcggtattac cgttgaccag
    20101 gctgagcgtc tgactaccga taaaggcgaa tggctgctgt atcgcgccta cgtgaagggc
    20161 gaaagtaccg aagcactgct gccgaatatg gtcgcgacct ctctggcgaa gctaccgatc
    20221 ccgaaactga tgcgctgggg tgcaagcgac gtacacttcg tgcgtccggt tcacaccgta
    20281 accctgctgc tgggcgacaa agtcattccg gctactattc tgggcattca gtccgatcgc
    20341 gtgattcgcg gccatcgttt tatgggcgag ccggaattca ctattgacaa tgccgatcag
    20401 tatccggaaa tactgcgcga gcgcgggaaa gtcatcgccg attacgaaga acgtaaggcg
    20461 aagattaaag ccgatgccga agaagccgcg cgtaagatcg gcggtaacgc tgacttaagc
    20521 gaaagtttgc tggaagaagt ggcttcgcta gtggagtggc cggtcgtact gaccgcgaaa
    20581 tttgaagaga aattcctcgc tgtgccgtct gaagcgctgg tttacaccat gaaaggtgac
    20641 cagaaatact tcccggtgta tgcgaacgac ggcaaactgc tgccgaactt tatcttcgtt
    20701 gccaacattg aatcgaaaga tccacagcaa attatctctg gtaacgagaa agtcgttcgt
    20761 ccacgtctgg cagatgccga gttcttcttc aacaccgacc gtaaaaaacg tctggaagat
    20821 aacctgccgc gcctgcaaac cgtgctgttc cagcaacagc tgggtacgct gcgcgacaaa
    20881 actgatcgca tccaggctct ggctggctgg attgctgaac agattggtgc tgacgttaat
    20941 cacgctaccc gtgcgggcct gctgtctaag tgtgacctga tgaccaacat ggtcttcgag
    21001 ttcaccgaca cccagggcgt tatggggatg cactacgcgc gtcacgatgg cgaagcggaa
    21061 gatgtcgcgg tggcgttgaa cgagcagtat cagccgcgtt ttgctggtga tgacctgccg
    21121 tccaacccag tggcttgtgc gctggcgatt gctgacaaga tggataccct ggcgggtatc
    21181 ttcggtatcg gtcagcatcc gaaaggtgac aaagacccat ttgcgctgcg tcgtgccgca
    21241 cttggcgtgc tgcgtattat cgttgagaag aacctcaacc ttgatctgca aacgctgacc
    21301 gaagaagccg tgcgtctgta tggcgataag ctgactaacg ccagcgtggt tgatgatgtc
    21361 atcgacttta tgctgggccg tttccgcgca tggtatcagg acgaaggtta ctccgtcgac
    21421 accatccagg ctgtactggc gcgtcgtccg acccgtccgg cagattttga tgcccgcatg
    21481 aaggcggtgt ctcatttccg caccctggaa gaagcctctg cgctggcggc ggcgaacaag
    21541 cgcgtctcca acatcctggc gaaagccact gagccgctga acgatatcgt ccacgcctcc
    21601 gtactgaaag aagcggcgga aattgagttg gccagacatc tggttgtgct gcgtgataag
    21661 cttcagccgt actttgccga tggtcgttat caggaagcgt tgattgagct ggcggcactg
    21721 cgcgcgccgg tggatgaatt cttcgaaaat gtcatggtga acgcggaaga gaaagatatc
    21781 cgtatcaacc gcctgacgct gttgtcgaaa ctacgcgaac tgttcctgca ggttgcggat
    21841 atttcgttac tgcaataagc gttcagttaa ataaacaaaa acctgctctc gggcaggttt
    21901 ttttataaca taaatagtat tagttgattc gctaataatt ctgtaactca tagacgcggt
    21961 tatctctatt gattggcaag aattatttca ggaatacatt aacgctggcg gtacggatat
    22021 tggcgttaga atagctgcgg gtgcttgaga ctgtttgtct caggtattca ccaaaaggca
    22081 gacagagaaa atccccacct gactataccc aaaataattc gagttgctta aaggcggcaa
    22141 gggagtgagt ccccaggagc atagataact atgtgactgg ggtgagcgag cgtagccaac
    22201 acataagcaa cttgaagtat gaagggtata taaatcaaaa gtgcactgcg cccattattg
    22261 atctcttcaa taacgaagcg atctcctgca gtatttcaga acgtccaact atgccgatga
    22321 tcgatgacat gctcatgaag gcatttgcca gacttgatgc gggtaccaat ccggttcttc
    22381 attcagatca gggctggcaa taccgtcatt gatggtacca gtatcagtta cgagagtttg
    22441 gcatcatcca aagtatgtcc cgcaaaggca actgccttga taatgcctgt gcagaatttt
    22501 ttttcggcac tttaaaatca gaaagttttt acaccagtaa atttaaggat attgatgaac
    22561 ttaagatagc tattgaggat tacatacgat actacaatac ccgacgaatt agccttagat
    22621 ttaacggact cagcccggtt gaataccgcc taaagagcta tccaggcaga aattaacaag
    22681 gtctgtacag ggatgctatc aggaaacctg aacgttggtg gatacgctca cgtaaatgtc
    22741 tgctatgagc gaggagcgga cgccctattt cacaaaaatt agtattgttc tacaagtaac
    22801 tctcacaatg aggttttatg aaaatcagaa ggttcagtaa tggggatgaa atatcgttat
    22861 tcagagtttt tttctcatct gtacatacga tcgcatcaca ctactacaca cgtgaacaaa
    22921 ttgatgcttg ggccccagca gatatcgacc tggagcgatg ggccaatcac attaaggaat
    22981 tacaaccttt tgttgtagag ctggatggtg aaatagctgg atatgcagat gttcaaccaa
    23041 atggatacat tgatcatttc tttgtatcag gaacctattc aagacagggg gtagggacac
    23101 tactgatgaa ttgcattcat gaggaagcca gacagcgtgg aattagtgaa cttacttcaa
    23161 atgtaagtaa ggctgcggaa gtgttctttc tacgacacgg ctttcatata gtggagcgag
    23221 gctttcctat ttgccgtgga gtgacattac aaaatgctct gatgagaaaa tgtttggcga
    23281 aataatagtc agcctgcaga aaggcagcat tgttcttttg ccttgttgaa ctcagtaaac
    23341 cgctacaatg agcaacgtcc gctgctggcg caaagcggac atcagtattc aaaaaatgaa
    23401 aaacgacgac ttgatgtata tcgtttgcta tacatggtgg ttgtgctatt cttgtaaagc
    23461 aaatgctata caaggggtgt ctcatgaaat cagatgttca acttaacctt agagctaagg
    23521 agtcgcagcg ggcgctcatt gatgcagctg cggaaatcct tcacaagtca cgtacagatt
    23581 tcattctgga aacggcctgc cgggctgccg agaatgtgat ccttgaccgc cgtgtattta
    23641 actttaacga tgagcaatat gaggagttca tcaatctgct tgatgcaccg gtcgcagatg
    23701 atcccgttat cgaaaaactg ctggcaagga aacctcagtg ggacgtgtaa cagcaccaga
    23761 acctttgtcc gcttttcatc aggtagctga gttcgtcagc ggtgaagctg tgctcgatga
    23821 ctggttgaag caaaagggcc tcaaaaacca ggctctcgga gcggccagaa catttgtggt
    23881 gtgcaagaaa gacacgaagc aagtagccgg tttttactct ctggccaccg gtagcgtcaa
    23941 ccatacagaa gcgacaggca accttcggcg taacatgcca gatcccatcc ctgtcattat
    24001 acttgcccgt cttgctgtcg atctctcatt ccatggaaaa gggcttgggg ctgatttact
    24061 tcatgatgca gtgcttcgtt gctatcgggt tgccgagaat attggtgtac gtgcaatcat
    24121 ggttcatgca cttaccgaag acgccaaaaa tttctacatt caccatggtt tcaaatcatc
    24181 acaaactcag cagcgaacat tgttccttag gctccctcaa tagaatgcaa agactgttat
    24241 gttcaaatcg ctataagcga taatttgata gaacgtctaa ggttaaattc aggaagaata
    24301 cgacgaacaa aatattgatg agacaggaat ccgcgtgatg caagaaagca acggaatgga
    24361 taatccgatt gcggacaatg ttatttagtt atagccagaa acaaaaaaga gcccatgtat
    24421 taaatggact ctttcgctga tgcctcggtt aatctgtcca ggttttgggg tcagtacaaa
    24481 gtgagcccac ctctgccatt cttgtggcgt tatgcattct caaggcactc tgttaatttt
    24541 atcttgttgg cgttttatag gcccgataac ccattatgtt atcgggcatt tttttaacgt
    24601 aatggtaatt ccgtcagaca ggtctggctg tcatctctgg tggcaatggc atgtgacgcc
    24661 gttttaccgt tgtagcttac ttcgagcgtc ccttccatat tgcgcggtag ccaaacaccg
    24721 ataaatccgt ttcgatagct ttgcatctct ttttgtacga tgacagcgcc tttactgtct
    24781 gtcactttta cagtgaacgg tttattcggc atttctccct gacagccgga aaggctgtgg
    24841 ttaaaacagg ggtgtgtccg ccattcatag ggcgcaaaag agagatagaa tttgtcgcct
    24901 aacggtagcg tataaatctg ctctccgtca gataatttga gctcggtact ggtaatcgac
    24961 gcggagtaag gcaaaggacg gctctgcggc gtctgatcaa tcgtatccac gatctgctca
    25021 accgtttttc ccgccagccc atgttgcgcc agaaaagcgg attctgagga tgccgcaagc
    25081 gcggagccgc tggcgcataa acccaaaagt aataaccatg atgatttcga cataacttca
    25141 attccttgtg aacaatctcc ttgcctacta taggggttcc cctaagggaa aggtcaaagg
    25201 gacgcagggt aaagtaatgc aaagttatgc tgggggggga gatggggaat tggaataaaa
    25261 aaaatccccg ccatcaggca gggattcaaa attctgagct ttttaagctt acaggctggt
    25321 tacgttgcca gctgccgggc ctttagcgcc gctttcgatg gtgaaggaaa ctttctgacc
    25381 ttcgtccaga gatttgtaac catcgttctg aatagcggag aagtgtacga acacgtcttt
    25441 agaaccgtca tcaggagtaa taaagccgaa gcctttatca gcgttgaacc attttacgat
    25501 accagtcatt ttaccggaca tagtgtatta ccttttaaaa aataagtgtg cctttcggcg
    25561 ttatggcgtg ctttacagat tttttaagcg ttaaggaaat gcgcactacg aggggtatct
    25621 aatggataac tcttgaaggg acttgcctta ctaaactgct ttaatggtct gtacgtcaaa
    25681 ccgttgagca cattaactca tgtaatgccg ggcgatgcaa cttttatttt actttatttc
    25741 tccaggccag taatcgggcg ggggaaacgg cccttacgca ggaccgttaa aacagaaagg
    25801 ggtaaaaatt gctccatcaa ttgcttactt aagcgtgggt tcgcctgtat caggcgcatc
    25861 aatttgagct ctgctggcgt gggtttttcg cgtttcgatt cccattcctg aaccatggca
    25921 accgttacgc ccagcgctct ggcgaattca tctgttttta gtcccgttcc tctccgtaac
    25981 tgttcaaatt cggtaaaagg attgggtttt tgcgtcaggg tgatctttcg tgtttcatct
    26041 ttaaaaacaa tttgttccag gctgctcagc agctcaaaca tcggatcttt atattccatt
    26101 gagaactcct gtaaatcaca cagcgggatc gtgaaatgca tcgaagcctc ttaagaatag
    26161 tcgggaaact tgcgggtggg gggcgacgcg ccgccaggaa gcgctatcga ttcgtttcga
    26221 tgccttacgc tacgcgactt ttaggacgct aacaatttga tccaggaaga tatatccgtc
    26281 tttcagaaaa taattgtaaa gattaaaaaa atattacatc ccccgctgga aagctttctt
    26341 gccgcgtttt ttatcgcagt gtcaggttaa aaattaacaa taaaataata aattaagcat
    26401 tgatgcagat aaacataatt ttccgctaca agatcgcgtg gaaagggtat cctgcaagcc
    26461 tgacctggac tatccttgta agccgtcagg cacgcaggtg tcgttgtgcg catttttggg
    26521 tgaaaggagt attaacaatg gcgacaggta agtcctgctc tcgctggttt gcgcctgttg
    26581 tggcgttatt aatggtgttt agcctgagcg ggtgttttga taaagaaggc gatcagcgca
    26641 aagcgtttgt cgatttcctg cagaatacag caatgcgtag cggagagcgt ttaccaacgc
    26701 tgacggccga tcagaaaaag cagtttggtc cgttcgtgtc tgattacgcg atactgtatg
    26761 gctactcgca gcaggtaaac caggcgatgg attccggtct gcgcccggtg gtcgatagcg
    26821 ttaacgccat ccgcgttccg caggattata tgacgcaacg cgagccgctg cggcaggcaa
    26881 atggttcgtt aggcgtgctg gcgcaacagt tgcagaatgc aaaactgcag gctgatgccg
    26941 cgcatggcgc gttaaagcag gccgatgacc tgaaacctgt gtttgatcag gtctacaaaa
    27001 aagtggtcac cgtgccggca gatgctttgc agccgctgat cccggcggcg cagatcttta
    27061 cgcagcagtt ggtacaagtg ggcgattata ttgcgcaaca gggcgagcag gtgagctttg
    27121 tcgcgaacgg cattcagttc ccgacctcac agcaggccag ccaatataat gcgctgattg
    27181 ggccgttggc ctcgcagcat caggcgttta atcaggcctg gacggcggcg gtaaacgcga
    27241 cccagtaatg acagtctgcc cgataagcgc aagccagcgc ttatcgggcc tgtagcgtta
    27301 tcccgccgct tgcggattga cgcagttctt ctctattttt ccctgcagcg catcaatcaa
    27361 attatccacc gcacaggcca tcatgttgta gcgcgtctca tgcgttgccg agccaatatg
    27421 cggcaccgcg acgacattag acatgttcag caggggcgaa tccacagata gcggttcctg
    27481 ttcaaagaca tccagacctg ccgcatatat ttcaccgttt tgcagcgcgg caatcagcgc
    27541 gttttcatcg accaccgggc cgcgtccggc attaataaaa atggcggacg atttcattct
    27601 ggcaaactgt gttgcgccaa acagatgtcg cgtttctgcc gttagtggca ggatcacgca
    27661 gacaaaatcg gcctcctgca acaacgtatc cagatcgcag tagcgggcgt taaaccggtc
    27721 ttccgcctcc tgatgccgcc gacgggcgtg atagagaacc ggcatggtaa acccaaagtg
    27781 cgctcgctgc gccagcgcca tcccgatacg ccccatccca acgataccga gtgttttgtg
    27841 atgcacatcg acgccaaacc atgccgggcc aatgctttct gtccattcac ccgccttaac
    27901 ccgttctgcg acgtccacca cgcggcgggc agtggccagc atcaacgcca tcaccgtatc
    27961 ggcaacggtt tccgtcaaaa cggcaggcgt gtgcatcagg actattttgc gggcagtaag
    28021 ggcgtccacc tcgacattat cgtatcccac cgagatggtc gacgccgcgc gtagcgccgg
    28081 cattttttcc agcagcgcgc ggttaacggt ttcgctggtg cccagaaggc cttgcgcgct
    28141 ggcaaatgcc tgcgcgtgtc gcgcgaccgt ttccggatgc aggttcggta cctgggtgac
    28201 ggtaaaatgc gcctccaggc gatgcagcaa atcatcaggc agggttttgt agagaatgat
    28261 ggacggcttc atgcgactct ccgtaaatca aaaggtaagc gcggcatgcg ccaaccggaa
    28321 caggcttatt attaacccgt ttagccatca tcgaccagcc gatttccccg ctgtcggcag
    28381 ccgtgtcgtg gtaaatagtg aatgaatact gaataatgcg acgtgtatcc ggtctggcga
    28441 gggaataatg caggccgggt aaagcatgcc gccttacccg gtacggtagt ttactgcaat
    28501 ggactcaagg taatttcgac gcggcggttt tgcgccttac cttctgccgt actgttgctg
    28561 gcgatcgggt tcgccggacc cattccgctg gtacggatac ggctggcgtc gacgccctgg
    28621 gtgatcagcg aactggcgac ggagtcagca cgctgctgcg acagacgcat attcagatcg
    28681 tggctaccgg tactgtcggt gtagcccacc acattgacgg cggtcttggg atactctttc
    28741 agcaccatcg ccacgccggt cagcgtgtta gcgcctgccg gtttcagcgt cgcgctgctg
    28801 ctgtcgaagg tgacattatt cggcatattc agaatgatat tatcgccgct tcgcgtcacg
    28861 ctaacgcctg tgccccgcat tttgtcacgc ag
//
LOCUS       DAGWFR010000034        28814 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.034, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000034 DAGWFR010000000
VERSION     DAGWFR010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 28814)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28814)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28814
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.034"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..218)
                     /locus_tag="MOX77_001587"
     CDS             complement(<1..218)
                     /locus_tag="MOX77_001587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001264383.1"
                     /note="universal genome maintenance protein;
                     Kae1/Qri7/OSGEP/YgjD family protein; in Archaea, some Kae1
                     are found as fusion proteins similar to two distinct
                     proteins in yeast that are involved in the KEOPS complex;
                     kinase associated endopeptidase 1 (Kae1) and a
                     serine/threonine protein kinase (Bud32); in Pyrococcus
                     Kae1 has atypical AP endonuclease activity and inhibits
                     the kinase activity of Bud32; the protein is essential in
                     Escherichia coli and Bacillus subtilis; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HCA3357153.1"
                     /translation="MRVLGIETSCDETGIAIYDDKKGLLANQLYSQVKLHADYGGVVP
                     ELASRDHVRKTVPLIQAALKEAALTASD"
     gene            446..661
                     /gene="rpsU"
                     /locus_tag="MOX77_001588"
     CDS             446..661
                     /gene="rpsU"
                     /locus_tag="MOX77_001588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HCA3357154.1"
                     /translation="MPVIKVRENEPFDVALRRFKRSCEKAGVLAEVRRREFYEKPTTE
                     RKRAKASAVKRHAKKLARENARRTRLY"
     gene            897..2642
                     /gene="dnaG"
                     /locus_tag="MOX77_001589"
     CDS             897..2642
                     /gene="dnaG"
                     /locus_tag="MOX77_001589"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HCA3357155.1"
                     /translation="MAGRIPRVFINDLLARTDIVDLIDVRVKLKKQGKNYHACCPFHN
                     EKTPSFTVNGEKQFYHCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEIPYEAG
                     TGLSQIERHQRQNLYQLMNGLNDFYQQSLTHPAAKPARDYLQKRGLSAEIIQRFAIGF
                     APPGWDNALKRFGNNSDNKALLLDAGMLVNNEQGSTYDRFRNRVMFPIRDKRGRVIGF
                     GGRVLGNDTPKYLNSPETDIFHKGRQLYGLYEAQQYSAEPQRLLVVEGYMDVVALAQY
                     DINYAVASLGTSTTADHMHMLFRATNNVICCYDGDRAGRDAAWRALETAMPYMTDGRQ
                     VRFMFLPDGEDPDTLVRKEGKAAFEARMEQAQPLSTFLFNSLLPQVDLSSPDGSTQLA
                     ALALPLINQVPGDTHRIQLRQTLGLKLGIFDDSQLDRLVPKQAESGVSRPAPQLKRTT
                     MRILIGLLVQNPDLAPLVPPLDALDQNKLPGLGLFKELVKTCLAQPGLTTGQLLELYR
                     GTNDAATLEKLSMWDDIADKAIAEKTFTDSLNHMFDSLLQLRQEELIARDRTHGLSSE
                     ERRELWTLNQELARK"
     gene            2792..4639
                     /gene="rpoD"
                     /locus_tag="MOX77_001590"
     CDS             2792..4639
                     /gene="rpoD"
                     /locus_tag="MOX77_001590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HCA3357156.1"
                     /translation="MEQNPQSQLKLLVTRGKEQGYLTYAEVNDHLPEDIVDSDQIEDI
                     IQMINDMGIQVMEEAPDADDLLLAENTTSTDEDAEEAAAQVLSSVESEIGRTTDPVRM
                     YMREMGTVELLTREGEIDIAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAEEARL
                     SDLITGFVDPNAEEEMAPTATHVGSELSQEDLDDDEDEDEEDGDDDAADDDNSIDPEL
                     AREKFAELRAQYVVTRDTIKAKGRSHAAAQEEILKLSEVFKQFRLVPKQFDYLVNSMR
                     VMMDRVRTQERLIMKLCVEQCKMPKKNFITLFTGNETSETWFNAAIAMNKPWSEKLHD
                     VAEEVQRCLQKLRQIEEETGLTIEQVKDINRRMSIGEAKARRAKKEMVEANLRLVISI
                     AKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQAR
                     TIRIPVHMIETINKLNRISRQMLQEMGREPTPEELAERMLMPEDKIRKVLKIAKEPIS
                     METPIGDDEDSHLGDFIEDTTLELPLDSATTESLRAATHDVLAGLTAREAKVLRMRFG
                     IDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEVLRSFLDD"
     gene            complement(4763..5269)
                     /gene="mug"
                     /locus_tag="MOX77_001591"
     CDS             complement(4763..5269)
                     /gene="mug"
                     /locus_tag="MOX77_001591"
                     /EC_number="3.2.2.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="G/U mismatch-specific DNA glycosylase"
                     /protein_id="HCA3357157.1"
                     /translation="MVKDILAPGLRVVFCGINPGLSSANTGFPFAHPANRFWKVIHLA
                     GFTDRQLKPEEAEKLLDFRCGVTKLVDRPTVQATEVKLHELRSGGRNLIEKIEDYQPA
                     ALAVLGKQAFEQGFSQRGIAWGKQKIAIGATMVWVLPNPSGLNRIKTEKLVEAYRELD
                     QALIMRGL"
     gene            5395..5470
                     /locus_tag="MOX77_001592"
     tRNA            5395..5470
                     /locus_tag="MOX77_001592"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5428..5430,aa:Ile,seq:cat)
     gene            complement(5550..6317)
                     /locus_tag="MOX77_001593"
     CDS             complement(5550..6317)
                     /locus_tag="MOX77_001593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore-interacting protein"
                     /protein_id="HCA3357158.1"
                     /translation="MTTSSARYPQRVRNELRFRELTVLRVERISAGFQRIVLGGEALD
                     GFTSLGFDDHTKVFFPEPGCRFTPPTVTEEGIIWGEGVRPVSRDYTPLYDEAHRELAL
                     DFFIHDGGVASRWAMEAREGDTLTIGGPRGSLVVPEDYACQVYVCDESGMPALRRRLE
                     SLSRLPARPAVTALVSIQDAAYRDYLAHLTDITVEYVVGGDEQAMQTRLSQLAIPESD
                     YFIWITGEGKTVKRLSQCFEKGFDPHLVRAAAYWHRK"
     gene            6549..7196
                     /locus_tag="MOX77_001594"
     CDS             6549..7196
                     /locus_tag="MOX77_001594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HCA3357159.1"
                     /translation="MMQNQHEGCCKNQDHKHDGCCKDREHQHEGCHSAHQHENASCGG
                     EHRHGHGCGRHGQGGGRRQRFFGHGELRLVILDILTRDASHGYELIKAIENLTGGGYT
                     PSAGVIYPTLDFLQDQQFITISDEEGGRKKIAITANGAQWLDENREHLTHIQARLKAR
                     CVGMELRKNPQMKRALDNFKAVLDLRINHSDINDAQIKRIIGVIDRAALEIAELD"
     gene            complement(7193..8761)
                     /locus_tag="MOX77_001595"
     CDS             complement(7193..8761)
                     /locus_tag="MOX77_001595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MCP four helix bundle domain-containing protein"
                     /protein_id="HCA3357160.1"
                     /translation="MFLHNIKIRSKLFMAFGLFIVLMVVSSALSLFSLDRANTGMQDI
                     ITNDYPTTVKANLLIDNFNDFIIAQQLMLLDEEGRWSQSSQKELSEISQRISALLDEL
                     SRENSHDADSQKIINEIREARQQYLESRFRILKDIQSNNRQAAIQEMMTRTVQVQKVY
                     KDKVQELIAVQDALMHEASVQVKEDFKNNRTLLITLALISIAAGGVIGWYIVRSITRP
                     LDDAVRFAEAIADGDLTRHITTDYKDETGVLLQALMAMKTRLLDIVQEVQNGSESIST
                     AAAQIVAGNQDLAARTEEQASSVEETAASMEQITATVKNTADHTSEATKLSAGAASVV
                     KNNGEMMNQVTQKMRVINDTANRMSDIINIIDSIAFQTNILALNAAVEAARAGEHGRG
                     FAVVAGEVRQLAQKSASSASEIRNLIEDSTSQTQEGMHLVEKASALINGMVDNVEEMD
                     VILREIGQASREQTDGISQINSAIGLIDAATQQNSCLVEESVAAAASLNEQALHLKEL
                     VNVFRVREEDTQPA"
     gene            complement(9149..10669)
                     /locus_tag="MOX77_001596"
     CDS             complement(9149..10669)
                     /locus_tag="MOX77_001596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HCA3357161.1"
                     /translation="MSSHPYVSQLNTPLDDDTTLMSTTDLESYITHANDTFVQVSGYQ
                     LNELLARPHNLVRHPDMPKAAFADMWYTLKQGEPWSGIVKNRRKNGDHYWVRANAVPM
                     IREGRVTGYMSIRTRATDDEIAAVEPLYQALNEGRCSKRIHKGLVVRQGLLGKLPAMP
                     VRWRVRSIMGLMAVMLALALFGTDASWQALLLGALAMLAGTALFEWQIVRPIENVATQ
                     ALKVATGERNSVQHLNRSDELGLTLRAVGQLGLMCRWLINDVSSQVSSVRNGSERLAK
                     GNNDLNEHTRQTVENVQETVTTMNQMAESVKLNSETASAADKLSMAASSAATQGGEAM
                     DTVIKTMDDIAHSTQRIGTITTLINDIAFQTNILALNAAVEAARAGEQGKGFAVVAGE
                     VRHLASRSANAANDIRKLIDASATKVQSGSEQVHAAGRTMDDIVAQVQNVTLLIARIS
                     QSTQEQTDGLSSLTRAVDELNRITQKNAALVEESAQVSAMVKHRASRLEDAVTVLH"
     gene            11099..12478
                     /gene="ygjG"
                     /locus_tag="MOX77_001597"
     CDS             11099..12478
                     /gene="ygjG"
                     /locus_tag="MOX77_001597"
                     /EC_number="2.6.1.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006894971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine aminotransferase"
                     /protein_id="HCA3357162.1"
                     /translation="MNRLPSSASALACSAHALNLIEKRTLNHEEMKALNREVIDYFKE
                     HVNPGFLEYRKSVTAGGDYGAVEWQAGSLNTLVDTQGQEFIDCLGGFGIFNVGHRNPV
                     VVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKL
                     AKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRRPFMPLLPGFRHVPFGNIDAM
                     SMAFSEGKKTGDEIAAVILEPIQGEGGVILPPQGYLTEVRKLCDEFGALMILDEVQTG
                     MGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFG
                     GNPLACAAALATINVLLEQNLPAQAEQKGDTLLDGFRQLAREYPNLVHEARGKGMLMA
                     IEFVDNETGYRFASEMFRQRVLVAGTLNNAKTIRIEPPLTLTIELCEQVLKSARNALA
                     AMQVSVEEV"
     gene            12649..14666
                     /locus_tag="MOX77_001598"
                     /pseudo
     CDS             12649..14666
                     /locus_tag="MOX77_001598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462133.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 2,4-dienoyl-CoA reductase"
     gene            complement(14747..15883)
                     /gene="rlmG"
                     /locus_tag="MOX77_001599"
     CDS             complement(14747..15883)
                     /gene="rlmG"
                     /locus_tag="MOX77_001599"
                     /EC_number="2.1.1.174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (guanine(1835)-N(2))-methyltransferase
                     RlmG"
                     /protein_id="HCA3357163.1"
                     /translation="MSHVDDGFRSLTLKRFPQTDDVNPLLAWEAADEYLLQQLDETEI
                     RGPVLILNDTFGALSCALAEHSPYSIGDSYLSELGTRENLRHNGIAESSVTFLDSTAD
                     YPQAPGVVLIKVPKTLALLEQQLRALRKVVTAQTRIIAGAKARDIHTSTLELFEKVLG
                     PTTTTLAWKKARLINCTFSHPQLANAPQTLSWKLEDTGWTIHNHANVFSRTGLDIGAR
                     FFMQHLPENLDGEIVDLGCGNGVIGLSLLAKNPQANVVFVDESPMAVDSSRLNVETNL
                     PEAFERCEFMINNALSGVEPFRFNAVFCNPPFHQKHALTDNIAWEMFHHARRCLKING
                     ELYIVANRHLDYFHKLKKIFGNCATIATNNKFVILKAVKQGRRR"
     gene            15969..16466
                     /locus_tag="MOX77_001600"
     CDS             15969..16466
                     /locus_tag="MOX77_001600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HCA3357164.1"
                     /translation="MTSLTYLQGYPEHLLAQVRALIAEQRLGAVLEKRYPGAHDYATD
                     KALYHYTQELKSQFLRNAPPINKVMYDSKIHVLKNALGLHTAVSRVQGGKLKAKAEIR
                     VATVFRNAPEPFLRMIVVHELAHLKEKDHNKAFYQLCCHMEPQYHQLEFDTRLWLTHQ
                     ALSAQ"
     gene            16618..17310
                     /locus_tag="MOX77_001601"
     CDS             16618..17310
                     /locus_tag="MOX77_001601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vancomycin high temperature exclusion protein"
                     /protein_id="HCA3357165.1"
                     /translation="MLSQCARFIRRLCFTRRALTVACFLLVAAGVALFYSNWLIVNAS
                     QHLTWNDIQTVPARNVGLVLGAKPGNRYFTRRINTAAALYHAGKVKWLLVSGDNGKKE
                     YDEPSAMQQALIAKGVPEAAIFCDYAGFSTLDSVVRARKVFGESRITIISQAFHNQRA
                     IWLAQQYGIDAIGVNAPDLNKRHGTYTRLREKLARVSAVLDAKILHRQPKYLGAGVTI
                     GADSAHGCPSRQ"
     gene            17398..18396
                     /locus_tag="MOX77_001602"
     CDS             17398..18396
                     /locus_tag="MOX77_001602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HCA3357166.1"
                     /translation="MIRFAVIGTNWITRQFVDAAHETGKFRLAAVYSRRLEQAQSFAN
                     DYPVEHLFTSLEAMAQSDAIEAVYIASPNSLHFSQTQRFLQHKKHVMCEKPLASNLAE
                     VDAAIACARDNQRVLFEAFKTACLPNFLLLRESLPKIGRMHKALLNYCQYSSRYQRYL
                     NGENPNTFNPAFSNGSIMDIGYYCLASAIALWGEPRSVQASANLLESGVDAHGVVVMD
                     YGDFSVTLQHSKVSDSVLASEIQGERGSLVIEKLSECQKVCFAPRGALMQDLTQPQHI
                     NTMLYEAGAFAQLIENHAVEHPGLSLSRATAKWLTEIRRQTGVIFPADDLTHPPTA"
     gene            18664..19632
                     /locus_tag="MOX77_001603"
     CDS             18664..19632
                     /locus_tag="MOX77_001603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HCA3357167.1"
                     /translation="MNTVGTPLLWGGFAVVVVIMLSIDLLLQGRRGAHAMSMKQAAGW
                     SILWVTLSLLFNAAFWWYLAETQGREVADPQALAFLTGYLIEKSLAVDNVFVWLMLFS
                     YFSVPPALQRRVLVYGVLGAIVLRTIMIFAGTWLITQFEWLLYVFGAFLLFTGVKMAL
                     AKEDESGIGEKPMVRWLRGHLRMTDTIENEHFFVRKNGLLYATPLLLVLIMVEFSDVI
                     FAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMYFLLSGVAERFSMLKYGLAVILVFI
                     GIKMLIVDFYHIPIAISLGVVFGILTITLVINTWVNHQRDKKLRAQ"
     gene            19887..21131
                     /gene="sstT"
                     /locus_tag="MOX77_001604"
     CDS             19887..21131
                     /gene="sstT"
                     /locus_tag="MOX77_001604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine transporter SstT"
                     /protein_id="HCA3357168.1"
                     /translation="MATQRASGLLQRLAQGSLVKQILVGLVLGILLAWISKPVAEAVG
                     LLGTLFVGALKAVAPVLVLMLVMASIANHQHGQKTNIRPILFLYLLGTFSAALAAVVF
                     SFAFPSTLHLSSSAQDIVPPSGIVEVLRGLLMSMVSNPIDALLNANYIGILVWAVGLG
                     FALRHGNETTKNLVNDMSNAVTFMVKLVIRFAPVGIFGLVSSTLATTGFSTLWGYAHL
                     LVVLIGCMLLVALVVNPLLVFWKIRRNPYPLVFACLRESGVYAFFTRSSAANIPVNMA
                     LCEKLNLDRDTYSVSIPLGATINMAGAAITITVLTLAAVHTLGVPVDLPTALLLSVVA
                     SLCACGASGVAGGSLLLIPLACNMFGIPNDIAMQVVAVGFIIGVLQDSCETALNSSTD
                     VLFTAAACQAEDERLANNALRS"
     gene            21581..22243
                     /locus_tag="MOX77_001605"
     CDS             21581..22243
                     /locus_tag="MOX77_001605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HCA3357169.1"
                     /translation="MELLTQLLNALWAQDFETLANPSMIGMLYFVLFMILFLENGLLP
                     AAFLPGDSLLILVGVLIAKGAMGFPQTILLLTVAASLGCWVSYIQGRWLGNTRTVQNW
                     LSHLPAHYHQRAHHLFHKHGLSALLIGRFIAFVRTLLPTIAGISGLNNARFQFFNWMS
                     GLLWVLILTSLGYLLGKTPVFMKYEDQLMSCLMLLPVVLLFFGLAGSLVMLWKKKYGS
                     RG"
     gene            22247..22630
                     /gene="mzrA"
                     /locus_tag="MOX77_001606"
     CDS             22247..22630
                     /gene="mzrA"
                     /locus_tag="MOX77_001606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EnvZ/OmpR regulon moderator MzrA"
                     /protein_id="HCA3357170.1"
                     /translation="MLKPRITARQLIWISAFLLMLTILMMTWSTLRQQESTLAIRAVN
                     QGASMPDGFSVLHHLDANGIHFKSITPKNDMLLITFDSPAQSAAAKTVLDQTLPHGYV
                     VAQQDDDNETVQWLSRLRESSHRFG"
     gene            22775..23143
                     /locus_tag="MOX77_001607"
     CDS             22775..23143
                     /locus_tag="MOX77_001607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1090 domain-containing protein"
                     /protein_id="HCA3357171.1"
                     /translation="MKYRIALAITLFTLSAGSYANSLCQEKEQDIQKEISYAEKHNNQ
                     RRIEGLNKALSEVRANCTDSKLRAEHQKKIAEQKEEVAERQRDLAEAKAKGDADKIDK
                     RERKLAEAQDELKKLEARDY"
     gene            23185..23490
                     /locus_tag="MOX77_001608"
     CDS             23185..23490
                     /locus_tag="MOX77_001608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF883 domain-containing protein"
                     /protein_id="HCA3357172.1"
                     /translation="MSKDNTTEHLRAELKSLTDTLEEVLSSSGEKSKEELSKIRSKAE
                     RALKESRYRLGETGDVIAKQTRVAAARADDYVRENPWTGVGIGAAVGLVLGVLLTRR"
     gene            23493..23891
                     /locus_tag="MOX77_001609"
     CDS             23493..23891
                     /locus_tag="MOX77_001609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HCA3357173.1"
                     /translation="MADSRQAQGPGKSVLGIGQRIVTIIVEMVETRLRLAVVELEEEK
                     ANLFQLLLMVGLTMLFAAFGLMSLMVLVIWAIDPQYRLNAMIATTVVLLVLALIGGIW
                     TLRKARQSTLLRHTRHELANDRQILEDDQS"
     gene            23888..24187
                     /locus_tag="MOX77_001610"
     CDS             23888..24187
                     /locus_tag="MOX77_001610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqjK-like family protein"
                     /protein_id="HCA3357174.1"
                     /translation="MSSKGEREKRKALLLSQIQQQRLDLSASRRDWLETTGAYDRGWN
                     TVLSLRSWALVGSSVMAIWTIRHPNMLVRWAKRGLGIWSAWRLVKTTLRQQQLRG"
     gene            24435..24827
                     /locus_tag="MOX77_001611"
     CDS             24435..24827
                     /locus_tag="MOX77_001611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008503138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HCA3357175.1"
                     /translation="MKKLEDIGVLIARILMPVLFITAGWGKISGYAGTQQYMEAMGVP
                     GFLLPLTILLEFGGGLAILLGFLTRTTALFTAGFTLLTALIFHSNFAEGVNSLMFMKN
                     LTIAGGFLLLALTGPGAFSLDRLLNKKW"
     gene            24895..25881
                     /locus_tag="MOX77_001612"
     CDS             24895..25881
                     /locus_tag="MOX77_001612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HCA3357176.1"
                     /translation="MGQLIDGVWHDTWYDTKSSGGKFQRSASAFRNWLTADGAPGPSG
                     EGGFAAEKDRYHLYVSLACPWAHRTLIFRKLKGLEPFIPVSVVNPLMLENGWTFDDTF
                     PAATGDTLYQHEFLYQLYLHADPHYSGRVTVPVLWDKKNHTIVSNESAEIIRMFNSAF
                     DGLGAKAGDYYPPALQSKIDELNGWIYDNVNNGVYKAGFATSQQAYDEAVEKVFTALA
                     RLEQILGQHRYLTGNQLTEADIRLWTTLVRFDPVYVTHFKCDKYRISDYLNLYGFLRD
                     IYQIPGIAETVNMDHIRHHYFRSHKTINPTGIISVGPWQDLLEPHGHDVRFG"
     gene            26005..26370
                     /locus_tag="MOX77_001613"
     CDS             26005..26370
                     /locus_tag="MOX77_001613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF805 domain-containing protein"
                     /protein_id="HCA3357177.1"
                     /translation="MDWYLKVLKNYLGFGGRARRKEYWMFILVNIIFTFVLGLLDAML
                     GWQRAGGEGVLTTIYGVLIFLPWWAVQFRRLHDTDRSAWWLLLLLIPIIGWLIIIAFN
                     CQNGTPGDNRFGPDPKRFS"
     gene            complement(26409..27305)
                     /gene="yhaJ"
                     /locus_tag="MOX77_001614"
     CDS             complement(26409..27305)
                     /gene="yhaJ"
                     /locus_tag="MOX77_001614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator YhaJ"
                     /protein_id="HCA3357178.1"
                     /translation="MAKERALTLEALRVMDAIDRRGSFAAAADELGRVPSALSYTMQK
                     LEEELDVVLFDRSGHRTKFTNVGRMLLERGRVLLEAADKLTTDAEALARGWETHLTLV
                     TEALVPTPAFFPLIDRLAAKANTQLSLITEVLAGAWERLEQGRADIVIAPDMHFRSSS
                     EINSRKLYTLMNVYVAAPDHSIHQEPEPLSEVTRVKYRGVAVADTARERPVLTVQLLD
                     KQPRLTVSTIEDKRQALLAGLGVATMPYSMVEQDIAEGRLRVVSPESTSEIDIIMAWR
                     RDSMGEAKAWCLREIPKLFAGK"
     gene            27410..28111
                     /locus_tag="MOX77_001615"
     CDS             27410..28111
                     /locus_tag="MOX77_001615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HCA3357179.1"
                     /translation="MITTRTAKQCGQADYGWLQARYTFSFGHYFDPTLLGYASLRVLN
                     QEVLAPGASFQPRTYPKVDILNLILDGEAEYRDSDGNHVQAKAGEALLLAAQPGISYS
                     EHNLSKVKPLTRMQLWLDACPERENALVQKIPLSTAQQQLLASPDGEQNSLQLRQQVW
                     VHHITLEKGESLNFQLHGPRAYLQSIHGTFHAMTHNEEREALTCGDGAFIRDEPNITL
                     VADTPLRALLVDLPV"
     gene            28135..28299
                     /locus_tag="MOX77_001616"
     CDS             28135..28299
                     /locus_tag="MOX77_001616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357180.1"
                     /translation="MSKKSAKKRQPVVKPAVQEAMSAAVPLGYEEMLTELEAIVADAE
                     ARLAEEEAAA"
     gene            complement(28412..>28814)
                     /locus_tag="MOX77_001617"
     CDS             complement(28412..>28814)
                     /locus_tag="MOX77_001617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="serine dehydratase subunit alpha family protein"
                     /protein_id="HCA3357181.1"
                     /translation="LSHLSAIYIHHQLPRLSALCAATTAAMGAAAGMAWLIDGRYDTI
                     AMAISSMIGDVSGMICDGASNSCAMKVSTSASAAWKAVLMALDDTAVTGNEGIVAHNV
                     EQSISNLCSLACRSMQQTDKQIIEIMASKAH"
BASE COUNT         6851 a         7689 c         7408 g         6866 t
ORIGIN      
        1 atatcgctcg ccgtcagagc ggcttctttt aatgccgcct gaatcagcgg cacggtttta
       61 cgcacatgat cgcgggaagc cagttcaggc actacgccgc cgtaatcagc atgtaatttc
      121 acctgactat acaattggtt ggctaacaga ccttttttgt cgtcgtaaat agcgatgccg
      181 gtttcatcgc aagatgtttc aatacccagt acacgcatga cttgttttac ctcgctctaa
      241 taccgcgcag tgtaggtcga atgcgggtgg atgtataccc tcagtcccga cttcgtgtat
      301 actccctccc cttataaaag tccctttcaa aaaaggccgc ggtgctttac aaagcagcag
      361 caattgcagt aaaattccgc accattttga aataagctgg cgttgatgcc agcggcaaac
      421 cgaattaatc aaaggtgaga ggcacatgcc ggtaattaaa gtacgtgaaa acgagccgtt
      481 cgacgtagct ctgcgtcgct tcaagcgttc ctgcgaaaaa gcaggtgttc tggcggaagt
      541 tcgtcgtcgt gagttctatg aaaaaccgac gaccgaacgt aagcgcgcta aagcttctgc
      601 agtgaaacgt cacgcgaaga aactggctcg cgaaaacgca cgccgtactc gtctgtacta
      661 atcttttgag agcgggctgc tctcaattca gatcgagttg tagttgtaag gccgtgcttc
      721 cgaaaggaat gcgcggcttg ttttcgttta tgcattagca tatacacaaa atcattcatg
      781 ctacgtccag gcggcaagag agcaagtccc cggcgcttac gcaagtcagc gacaggggtg
      841 agcaaacgta gccaacacta cggcagcctg aagaatgacg tgtataaaag gggcatatgg
      901 ctggacgaat cccacgcgta tttattaatg acctgctggc gagaaccgat atcgtcgatc
      961 tgatcgacgt gcgcgtaaaa ctcaagaaac agggcaagaa ctatcacgcg tgttgtccat
     1021 tccataatga gaaaacccct tctttcaccg taaacggtga aaaacagttt tatcactgct
     1081 ttggatgcgg cgcgcatggc aatgcgatcg actttttgat gaattacgac aagctcgaat
     1141 ttgtcgaaac cgtcgaagaa ttagcggcca tgcataacct ggaaattccc tatgaagcag
     1201 gcaccgggct tagccagata gagcgccatc aacggcaaaa cctctatcag ttgatgaatg
     1261 gtctgaatga cttttatcag cagtcgctta cccatcctgc ggcaaaacct gcgcgtgact
     1321 atctgcaaaa gcgcggtctg agcgctgaaa ttattcagcg tttcgccatt ggcttcgcgc
     1381 cgcctggttg ggataacgcg ttaaagcgct tcggtaataa cagcgataac aaggcattgt
     1441 tgctggatgc cggaatgctg gtcaataacg agcagggcag cacttacgat cgtttccgta
     1501 atcgggtcat gttccctatt cgggacaaac gcggcagggt gattggtttt ggcggtcgag
     1561 ttctggggaa cgacacgccg aaatacctta actctccgga aacggacatt ttccataaag
     1621 gccgccagct atatggtctt tatgaggctc agcaatatag tgctgaaccg caacgcttgc
     1681 ttgtggtcga aggttatatg gatgtcgtcg cactagcgca atacgacatt aactatgcgg
     1741 tcgcctcgct gggtacctca accacggcag accatatgca tatgttattc cgggcgacga
     1801 acaacgtaat ttgctgttac gacggcgacc gggctggccg tgatgccgcc tggagagcgc
     1861 tggaaacagc aatgccttat atgaccgacg gtcggcaggt acgctttatg tttttacctg
     1921 acggcgaaga cccggatacg ctggtgcgta aagaaggcaa ggcggctttt gaagcgcgga
     1981 tggagcaggc gcagccgctc tctacgtttc tgtttaatag cctcctgccg caggtggatt
     2041 taagctcgcc ggatggcagc acgcagttag ccgcgctggc gctgccgctc attaatcagg
     2101 tgcctggcga cacgcaccgt attcagctgc gccagacgtt ggggctgaag ttaggcattt
     2161 tcgatgatag tcagcttgat cgtttagtgc caaaacaggc ggaaagcggc gtttcccgcc
     2221 cggctccgca gctaaaacgc acgaccatgc gtatactgat aggattactg gtgcaaaatc
     2281 cggatctcgc gccgttagtg ccgcccttag acgcgctgga tcagaataag ctgcctggac
     2341 ttggcttatt taaagaattg gtcaaaactt gtttggctca gccaggtctt actaccggac
     2401 aacttctgga actctaccgt ggcacaaatg atgctgcgac ccttgaaaaa ttatcgatgt
     2461 gggacgatat agcagataag gcgattgccg aaaagacctt taccgactca ctcaaccata
     2521 tgtttgattc gctgctgcaa ctgcgacaag aagagctgat cgctcgcgat cgcactcacg
     2581 gtttaagcag cgaagaacgc cgagagctct ggacgttaaa ccaggagctg gccagaaaat
     2641 gaatttaacg gcttaaatgc cgcatatcgt tcgggaagcc cccgacagcc gcagtgagag
     2701 gcagcggcca aaatataagt atgccctcgc tttaaatgtc gacagctata ccgtcgacac
     2761 caatcaaacg aataagtgtg gataccgtct tatggagcaa aacccgcagt cacagctgaa
     2821 acttcttgtc acccgtggta aggagcaagg ctatctgacc tatgctgagg tcaatgacca
     2881 tctgccggaa gatatcgtcg attcagatca aattgaagat atcatccaaa tgatcaacga
     2941 catgggtatt caggtaatgg aagaagcgcc tgatgccgat gatctgctgc tggctgaaaa
     3001 taccaccagc accgatgaag atgcggaaga agctgctgca caagttctgt ccagtgttga
     3061 gtctgaaatc ggtcgtacga ctgacccggt acgcatgtat atgcgtgaaa tgggcactgt
     3121 tgaactgttg acccgggaag gcgaaatcga catcgctaaa cgtatcgaag acgggatcaa
     3181 ccaggttcaa tgctccgttg ccgaataccc ggaagccatt acctatctgc tggaacagta
     3241 cgatcgcgtt gaggctgaag aggctcgttt gtccgatctt atcaccggct ttgtcgatcc
     3301 gaacgcggaa gaagagatgg cgccgaccgc aactcacgtc ggttctgaac tctcccagga
     3361 agacctggat gatgacgaag acgaagatga agaagacggc gacgatgacg ccgccgatga
     3421 cgacaacagc attgaccctg aactggcacg cgaaaaattc gctgaactgc gcgcgcaata
     3481 cgtcgttacg cgcgacacca tcaaagcgaa aggccgcagc catgctgccg cgcaggaaga
     3541 gattctgaag ctgtctgaag tgttcaaaca gttccgtctg gtaccgaagc aattcgacta
     3601 tctggtcaac agtatgcgcg tgatgatgga tcgcgtgcgt actcaggaac gtctgatcat
     3661 gaagctctgc gtcgagcagt gcaaaatgcc gaagaagaac tttatcacgc tgtttaccgg
     3721 taacgaaacc agcgaaacct ggttcaatgc cgctatcgcg atgaacaaac cgtggtcgga
     3781 aaaactgcac gatgtcgcgg aagaagtgca acgctgcctg caaaaactgc ggcagataga
     3841 agaagagacc ggtctgacca tcgaacaggt gaaagacatc aaccgtcgca tgtccatcgg
     3901 ggaagcgaaa gcccgccgtg cgaaaaaaga gatggttgaa gcgaacttgc gtctggttat
     3961 ttctatcgcc aagaaataca ccaaccgagg tctgcagttc ctcgatctga ttcaggaagg
     4021 caacatcggt ctgatgaaag cggtagataa gttcgaatac cgtcgtggtt acaagttctc
     4081 cacctacgct acctggtgga ttcgtcaggc gatcacccgc tctatcgccg accaggcgcg
     4141 caccatccgt attccggtgc atatgattga gaccatcaac aagctcaacc gtatttctcg
     4201 ccagatgctg caagagatgg gccgcgagcc aacgccggaa gagctggctg aacggatgct
     4261 gatgccggaa gataaaattc gtaaggtgct gaaaatcgcc aaagagccta tctccatgga
     4321 aacgccgatc ggcgacgatg aagattcgca tctgggtgat ttcatcgagg atactaccct
     4381 cgagctgccg ctggactctg ccaccaccga gagcctgcgc gccgccactc acgacgtttt
     4441 ggctggcctg accgctcgtg aagcgaaagt cctgcgtatg cgtttcggta tcgatatgaa
     4501 caccgaccac acgctggaag aagtgggtaa acagttcgac gttacccgcg aacgtatccg
     4561 tcagatcgaa gcgaaggcgc tgcgtaaact gcgccaccct agccgttctg aagtgctgcg
     4621 cagcttcctc gacgattaat tcgccgtaca cgtataaacg ccgccgcaag gcggcgtttt
     4681 tttatcaggt catgcgcgag cgttctattt ggcctgcaga atctctacac aacgcgagta
     4741 ttcgcgccct cattccccat tgctatagcc cacgcataat gagcgcttga tccagctcgc
     4801 gataggcctc gaccagtttt tccgttttaa ttcggtttaa gccgctggga ttcggcaaca
     4861 cccacaccat cgtcgcgcca atggcgatct tttgtttacc ccaggcgata ccgcgctggc
     4921 tgaatccctg ttcaaaagcc tgtttaccaa gcaccgccag cgccgcgggc tggtagtcct
     4981 ctatcttttc aatcaggttg cgtccgccgc tacgtaattc atgcaacttc acctcagtcg
     5041 cttgtaccgt cggtcggtcg acgagtttcg ttaccccgca gcgaaaatcc agtaattttt
     5101 ccgcctcctc cggtttcaac tgtcgatcgg tgaaaccggc caaatgaata actttccaaa
     5161 aacgattcgc gggatgcgca aacggaaagc cggtattcgc cgaggagagt cccggattga
     5221 tgccgcaaaa aaccacccgt agccctggcg ccagtatgtc cttaaccatt attactcctg
     5281 agcaatacaa cgttctttaa gtataacggg ttgaaaacac attgtttata aaaacagcac
     5341 ccgcacggtt acggctggat tacagcgtaa agttacatta taatccaccg ccacggcccc
     5401 ttagctcagt ggttagagca ggcgactcat aatcgcttgg tcgctggttc aagtccagca
     5461 ggggccacca aattttagct ttaaaatcat ataattaagc cactctaaag agtggctttt
     5521 ttgtttctga cagggctcgc cccataccgc tatttacgat gccaataggc tgccgcacgt
     5581 accaggtgtg gatcaaaccc cttttcaaag cactgactta aacgttttac cgttttgcct
     5641 tcgccagtaa tccagatgaa atagtctgat tctggtattg ccagctgcga caggcgcgtt
     5701 tgcattgcct gttcatcgcc gccaacaaca tattccacag taatatccgt caaatgggcg
     5761 agataatcgc gatatgcggc atcctgaatg ctcaccagcg cggttaccgc agggcgcgca
     5821 ggcagacggc taagcgattc cagacgacga cgtagcgcag gcataccgga ctcatcgcag
     5881 acataaacct gacaagcata atcttccggc accaccagcg aaccgcgcgg cccgccaatc
     5941 gtcagtgtat cgccttcacg ggcttccatt gcccaacggc tggctacgcc gccatcgtgg
     6001 ataaagaaat ccagcgccag ctcgcgatgc gcctcgtcat acagcggcgt gtaatccctg
     6061 gagaccggac gaacgccctc cccccagata atgccttcct cagtgactgt cgggggcgta
     6121 aagcgacagc ctggctcagg gaaaaaaact ttcgtgtgat cgtcaaagcc cagggaggtg
     6181 aaaccgtcca gcgcctcgcc gccaagtacg atccgctgaa atcctgcgct aatacgttct
     6241 acccgcagaa cggtcagctc gcgaaaacgc agttcattac gaacacgctg tggatagcgt
     6301 gcggatgatg tcgtcatttt ttgccttcgt gaagtaatac gatatatcta aattaaagtt
     6361 ttaaatgata atgattgtta atcagtaaaa atgcaactgt tttttgatag tgttctggca
     6421 acgcgtagct aactataacc ttaagataaa accttataaa ttaatagatt atagcaaaaa
     6481 tggcttttac ccttgctaaa acccatcatt tagatataaa ttagatatat ctaaataagc
     6541 aggagacaat gatgcaaaat caacatgaag ggtgttgcaa aaaccaggat cataagcacg
     6601 acggctgctg taaagatcga gaacatcagc atgaaggctg ccatagcgcg catcagcatg
     6661 agaacgccag ttgcggcggc gaacatcgtc acggacacgg ctgtggtcgt catggacagg
     6721 gcggtggtcg gcgtcagcga ttttttggcc acggggaact tcggctggtc attcttgata
     6781 tcctgacccg ggacgccagc cacggctatg aactgattaa agcgatagaa aacctgacgg
     6841 ggggcggcta tacgccaagc gctggcgtga tctaccctac gctggatttt ttacaggatc
     6901 agcaatttat cacgattagc gacgaagaag gcgggcggaa aaaaatcgcg attaccgcga
     6961 acggcgcgca atggcttgat gaaaatcgcg aacatctgac gcatattcag gcgcggctaa
     7021 aagcccgttg tgtgggcatg gagttacgta aaaatcctca gatgaagcgg gcgctggata
     7081 acttcaaggc cgtgctggat ctgcggataa accacagcga tatcaacgac gcgcaaatca
     7141 aacgcattat cggcgtgatt gatcgcgcgg cgctggaaat cgccgaactg gattaagcgg
     7201 gctgcgtgtc ctcttcgcgg acgcggaaca cgttaaccag ctcttttaaa tgtaacgcct
     7261 gttcgttcag cgacgctgcg gcggcaacag actcttccac aaggcaggag ttttgttgcg
     7321 tggcggcgtc aatcaggcca atcgcgctgt taatctgcga aataccgtca gtttgctcgc
     7381 ggctggcctg cccaatctca cgtaatatca catccatctc ttcgacgttg tccaccatgc
     7441 cattaatcag ggcgctggct ttctccacca ggtgcatccc ttcctgagtc tgactggttg
     7501 aatcttcaat caaattacgg atttcactgg ccgacgaggc gctcttttgc gccaactggc
     7561 gaacctctcc ggcgacaacg gcaaaaccgc gcccatgttc gcccgcgcgc gccgcttcaa
     7621 ccgccgcgtt cagcgccaga atattggtct gaaaggcaat ggaatcaatg atattgatga
     7681 tatccgacat acgatttgcc gtatcgttaa tgacgcgcat tttctgcgtc acttgattca
     7741 tcatctcccc attgtttttc actacgctgg cggcgccagc agagagtttg gtcgcttcac
     7801 tggtatgatc ggctgtgttt ttaaccgtgg cggtaatctg ttccatcgac gccgccgttt
     7861 cttcaaccga gctggcctgc tcttccgtac gcgccgccaa atcctggtta ccggcgacaa
     7921 tttgcgccgc cgccgtggag atactctccg aaccgttttg cacttcctgt acgatatcca
     7981 gcagacgcgt tttcatcgcc attaacgctt gcagtagtac gcctgtttca tctttatagt
     8041 cggtggtgat atggcgagtc agatcgccat cggcaatcgc ctcggcaaag cgtaccgcgt
     8101 catcaagcgg tcgggtaata gaacgcacaa tataccatcc tattacgcct ccggcggcga
     8161 tgcttatcag cgccaaagtg attaacaacg tccgattatt tttaaaatcc tctttgacct
     8221 gcacgctcgc ttcatgcatc agcgcgtcct gaacagcgat aagttcctgg actttgtcct
     8281 tatagacttt ttgcacctgc accgttctgg tcatcatctc ctgaatggcc gcctgacgat
     8341 tattgctttg aatatctttc aaaatacgga atctggactc caggtattgc tggcgcgctt
     8401 cacggatttc attaatgatt ttctgtgaat ccgcatcgtg actattttcc ctggaaagct
     8461 catccagtaa cgccgaaatg cgctggctta tctcactgag ttctttctgc gagctctggc
     8521 tccagcgccc ctcttcatcc agtaacatga gctgctgcgc gatgatgaaa tcattaaaat
     8581 tatcgattaa cagattggct tttaccgtgg tgggataatc attggtaata atgtcctgca
     8641 tacccgtatt agcccgatca aggctaaaca aagacagagc ggaactcacc accatgagaa
     8701 caatgaataa gccaaaggcc ataaataatt ttgaacgtat tttaatgtta tgcaaaaaca
     8761 tattttctcc ctgggatcgc atatcctcat acaggaagat ttatcggcaa taatgttact
     8821 aactttatga tattgatcgc tttttatttc ggaacattat tagtaattaa tatttattgt
     8881 tcacagaaag atgaaccaaa agtgacataa attggcacta ataatgaaag aaatacgcta
     8941 aaaggttaac catttcttat ttatcaactg agtttatacc tattaatagg tagacaaggg
     9001 agaaggaata aatatcacat tatttttaac atcacaggcc actggtactc tctatgatgg
     9061 caggcaccgc cttctatcag agcacatccg cccggtaagc ttgttgctac cgggcggatg
     9121 tcattaccgt tgctacctac aaataaactt aatgcagtac cgtgaccgca tcctccagcc
     9181 ggctggcacg gtgttttacc atcgcggaga cttgtgcgct ctcttccacc agcgccgcat
     9241 tcttctgggt tatgcggttc aactcgtcca cggcgcgagt caggctggaa agcccatctg
     9301 tctgttcctg cgtcgactgg ctgatccgtg cgataagcag ggtgacattt tgcacctggg
     9361 ctacaatgtc atccatggta cggcctgcgg cgtgaacctg ctcggagcct gactgcacct
     9421 ttgttgcgct ggcatcaatt aatttacgaa tatcgttcgc cgcgttagcg ctgcggctgg
     9481 caagatggcg tacctcgcca gcaaccacgg caaacccttt cccctgctcg cccgctctcg
     9541 ccgcttctac cgccgcattc agcgccagga tattcgtctg aaaagcgata tcgttaatta
     9601 gcgtggtgat cgtcccgata cgttgcgtac tgtgagcgat atcatccatc gttttaatca
     9661 ccgtatccat cgcctcacct ccctgagtcg ccgcgctact ggccgccatg gaaagcttat
     9721 ccgcagcgga agccgtctcg gaattgagct tcacggactc cgccatctgg ttcatggtcg
     9781 ttaccgtttc ctgaacattc tccacggtct gacgggtgtg ttcgttcaga tcattgttac
     9841 ccttcgccag cctttcactg ccgtttctga cgctggacac ctgacttgat acgtcattga
     9901 tcagccaacg gcacatcaag ccaagctgcc ccacggccct cagcgtcagc cccaactcat
     9961 cgctacgatt aaggtgttgt acgctgttgc gttcgccggt cgccactttc agcgcctgcg
    10021 tcgccacatt ttcaatggga cgcacaattt gccattcaaa tagcgccgta cctgccagca
    10081 tcgccaacgc gcccaacaac aacgcctgcc atgaggcatc cgtaccgaac agcgccaacg
    10141 ccagcattac ggccattagc cccataatgc tacgcactcg ccagcgaaca ggcatcgcgg
    10201 gcagtttgcc cagcaagccc tgacgaacca ccaggccttt atgaatacgt ttactacacc
    10261 gcccttcatt tagcgcctga tataaaggct cgacggcggc aatctcatca tccgtggcgc
    10321 gggtacggat cgacatatat cccgtcacac gcccttcacg tatcatcggt accgcgttgg
    10381 cccgcaccca ataatgatcg ccgtttttac gccggttttt cacaatgccg ctccacggtt
    10441 cgccctgttt tagggtgtac cacatatctg cgaaggcagc tttcggcata tccggatgac
    10501 gcaccagatt atgtggccgc gccagtaact cgtttaactg atagccgctc acctggacaa
    10561 aagtgtcatt ggcgtgagtg atatagcttt ccaggtcggt cgtagacatc agagtggtat
    10621 catcatccag cggggtattt agctggctga cgtagggatg agaagacatg atagcgtcct
    10681 gtgcaggtta tctggatgtt aatttttcgc tcagatgtta tttcggcgct aatctattta
    10741 tctttagttg ttaaaattgc tctggatcgc aatttgcgat taatccttaa tatttgtacg
    10801 attttcacct tatcctgcgc cttattttca ttatgaaatt gtttagcgtg gacaaccttt
    10861 ttctttaaaa tctgccctgg ctcacctttt tctcacgccg ccgctaacgc aacacaccgt
    10921 aaaccgtaaa acaagatctg ctcaaaatgc atccaattgt taacgtataa cattaaatgt
    10981 tgtgtaaatg tgattattcc tggtgtttat cccgattttc actatgggct tagacccccg
    11041 ctaatccctg caatacttaa ttcagtatca tgtgatacac ggccctctgg agctcatttt
    11101 gaacaggtta ccttccagcg catcggcttt ggcctgtagc gcgcacgcac tgaatctcat
    11161 cgagaagcga acgctaaacc atgaggaaat gaaagcacta aaccgagagg tcattgacta
    11221 ctttaaagag catgtaaatc caggatttct ggaataccgg aaatctgtta ccgccggcgg
    11281 ggattacgga gccgtagagt ggcaagcggg cagtttgaat acgcttgtcg acacccaggg
    11341 gcaggagttt atcgattgtc ttggggggtt tggcatcttt aacgtggggc accgtaatcc
    11401 tgttgtggta tccgccgtcc agaatcaact cgcaaaacaa cctctccaca gccaggagtt
    11461 acttgacccc ttgcgggcga tgctggcaaa aacgctggcg gcgctaacac cggggaaact
    11521 caagtacagc tttttctgta acagcggcac cgaatccgtc gaagcggcgc taaaactggc
    11581 aaaagcgtat cagtcgccgc gcggcaagtt tacctttatc gccaccagcg gcgcatttca
    11641 cggcaaatca ttgggcgcgc tctccgccac ggccaaatcc accttccgca gaccctttat
    11701 gcctttactg ccgggcttcc gccatgtgcc gtttggcaat atcgacgcga tgagcatggc
    11761 atttagcgaa ggcaaaaaaa cgggcgacga gatagcagcc gtgattctgg agcctattca
    11821 gggtgaaggc ggcgtgatcc tgccgccgca gggatacctg acagaggtac gtaagctctg
    11881 tgatgaattc ggcgcgctga tgattctgga tgaagtacaa accggcatgg ggcgtaccgg
    11941 caagatgttt gcctgcgagc acgaaaatgt gcagcctgat attctgtgtc tggcgaaagc
    12001 cctgggcggc ggcgtgatgc caattggcgc caccatcgcg actgaggagg tgttttcggt
    12061 tctgttcgac aatcccttcc tgcataccac cacttttggc ggtaacccgc tggcttgtgc
    12121 tgccgcgctg gcgaccatta acgtcctgct ggaacaaaac ctcccggccc aggcggaaca
    12181 aaaaggcgat acgctcctgg atggttttcg acaacttgcg cgtgaatatc ccaatctggt
    12241 acacgaggcg cgcggcaaag gtatgttgat ggccattgaa tttgtcgata acgaaacggg
    12301 ctaccgtttt gccagtgaga tgttccgtca acgcgtgctg gtcgctggta cgctgaataa
    12361 tgcgaaaaca attcgtatcg agccaccgct cacgctaacc attgaactgt gcgaacaggt
    12421 attgaaatca gcgcgtaatg cgctggcggc aatgcaggtg agcgttgaag aggtttaaaa
    12481 acgatgccgg atggcgctgt gcttatccgg cctgttttcc ccgggtcgcg gcctcttttt
    12541 tgaatcccat cacaatcacc acattcccct tttccctttt acctcgcgac ggctacagta
    12601 gtaactcatc cgaccacata acaataattt tacatactgg atacgcttat gagctacccg
    12661 tcgctgttcg ccccgctcga tctgggcttt actactctca gaaaccgtgt gctgatggga
    12721 tcgatgcaca cgggtctgga agaacatcct gatggcgctg agcgcctggc ggcattttat
    12781 gccgagcgcg cgcgacacgg cgtagcgtta atcgtcaccg gcggtattgc gcccgttccc
    12841 tccggggtcg tgatgaccgg cggcgcgatg ctgaacgatg ccagccagtt aaagcctcac
    12901 cgcgtggtga ccgatgccgt acatgcgcaa ggcggtaaaa tcgcgctgca aattctgcac
    12961 accggacgtt acagctatca gccgcacctg gtcgcgccgt cggcaattca ggcgccaatc
    13021 aaccgcttta tgccacatga actgacgcat gatgaaatct tgcagttaat cgacgacttc
    13081 gcacattgcg cgcagctggc gcgggaagca ggctacgacg gcgtagaggt gatgggatca
    13141 gagggctatc tgattaatga atttctcacg cggcgaacta accatcgcga tgacgaatgg
    13201 ggcggcgact ataccagtcg tatgcgcttc gcggttgagg tagtacgcgc ggtacgccag
    13261 cgggtaggga acgactttat tattatctat cgcctgtcga tgctcgatct ggtggaaaat
    13321 ggcggcacgt tcgacgaaac ggtacaactg gcgcaagcca ttgaagccgc aggcgcaagc
    13381 ctaattaata ccggcattgg ctggcatgag gcgcgaatcc cgaccatcgc cacgccagta
    13441 ccgcgtggcg cctttagctg ggtgacacgg aaactcaaag gtcatgtgtc ggttccgctg
    13501 atcgcgacca atcgcattaa cgatccgcag gtcgccgaga cgatcctgac gcgcggcgat
    13561 gccgatatgg tgtcgatggc gcgtcccttc cttgccgatg ctgaattcct gactaaagcg
    13621 caatccggac gcgcagatga gatcaatacc tgtatcggct gtaatcaggc ctgtctggat
    13681 cggatcttca tcggcaaagt gacctcctgt ctggtgaccc acgcgcctgt cacgaaaccc
    13741 acatgccgat aacgccggcc atacgcaaaa agaatctggc cgttgtcggc gcaggcccgg
    13801 cggggctggc tttcgcgatt aacgccgcgt cgcgcggcca tcatgtcacg ctgtttgacg
    13861 cccagagtga aattggcggt cagtttacta tcgccaggca gatcccgggt aaagaagagt
    13921 tttacgaaac gctgcgctac taccgtcgaa tgatcgatgt tactggcgtt acgctgaaac
    13981 tgaaccaacg ggtgaacgca gaggatcttc agccgtttga cgaagcgatc ctcgcctgtg
    14041 gaatagtacc gcgccgcccg ccgatagacg gtatcgatca tccaaaagta ttgacctacc
    14101 tggaggtatt gcgcgataaa gcgccggttg gtaagcgagt ggcgatcatc ggctgcggcg
    14161 ggatcggttt tgacacggcc atgtatctga gccagcacgg cgaatccacc agccaaaata
    14221 ttgctgaatt ttgtacggaa tggggaattg ataccagcct gcaacaggca ggcggtctgc
    14281 gcccggaagg cccgcgcctg gcacgtagtc cacggcaaat cgtcatgctg caacgcaaag
    14341 ccagcaagcc gggcgaaggg ttaggtaaaa ccaccggctg gatccatcgc gcgacgttac
    14401 tggcgcgcgg cgtgaagatg atcccggcgg tcagttacta gaagatcgac gacgacggat
    14461 tacatctctt gatcggcggc gaaccgcagt tgctggaagt ggatcatgtg gtgatctgcg
    14521 ccggacagga accccgccgt gaactggcgg acccgttacg cgccgcaggt aaaacggtac
    14581 atcttatcgg cggatgcgat gtcgcgatgg aactggatgc ccgacgggcg attgcccagg
    14641 gcacccgact ggcgctggag atttaacgac tttgcctgat ggcgctgcgc ttatcgggcc
    14701 tatgccgtca taccggtttt ataggccggt atgacgcttg agtgccttat cgacggcgtc
    14761 cctgcttcac cgctttcaga ataacaaatt tattgttggt tgctatcgtc gcgcaattac
    14821 cgaaaatctt cttcagcttg tggaaatagt ccagatggcg gttcgccaca atatacagtt
    14881 cgccgttgat tttcaggcag cggcgggcat gatggaacat ctcccaggcg atattatccg
    14941 tcagcgcatg tttctggtgg aacggcggat tgcagaacac cgcgttaaaa cggaacggct
    15001 ccacgccgga gagcgcgttg ttgatcataa attcgcagcg ttcgaacgct tccggcaggt
    15061 tcgtttctac attcaaacgg ctggaatcta ccgccatcgg cgattcatcg acaaatacca
    15121 cgttcgcctg cggatttttc gccagtaagc tcaggccaat caccccattg ccgcagccga
    15181 gatcgacaat ctccccgtcg aggttttccg gcaaatgctg cataaagaag cgcgcgccga
    15241 tatccaatcc ggtacgagaa aacacattcg cgtggttgtg aatcgtccag cctgtatctt
    15301 ccagtttcca gcttagcgtt tgcggcgcgt tggccagttg cggatgactg aaggtacagt
    15361 taatcaggcg cgctttcttc cacgccagcg tcgtcgtggt tgggcccagc actttttcaa
    15421 acagttccag cgtagaggta tgaatatcac gcgctttcgc gccggcgata atacgcgttt
    15481 gcgccgtaac gaccttacgc aaagcgcgta actgctgttc cagcaacgcc agtgttttcg
    15541 gtactttaat caataccacg cccggtgcct gcgggtagtc agcggtactg tcgagaaacg
    15601 ttacgctgga ctccgcgatg ccgttatggc gtaaattctc tcgcgtaccc agttcgctta
    15661 aatatgaatc gccaatactg tatggcgaat gctccgccag cgcacagctt agcgcgccaa
    15721 acgtatcatt caggatcagc accgggccgc gaatttccgt ctcatccaac tgttgcagca
    15781 gatactcatc ggccgcctcc cacgccagaa gcgggttaac atcatccgtt tgcggaaaac
    15841 gtttcagcgt cagtgaacgg aaaccgtcgt ctacgtggct cattaggcct cctgaatggt
    15901 aaaattgcgg cgttatccct gaaaagggtg cgtgagtata cactttttat cggcaacatg
    15961 gagctttgat gacctcacta acttaccttc aggggtatcc ggaacatctc cttgcccagg
    16021 tgcgcgcctt aatcgccgag cagcgcctgg gggcggtgct ggaaaaacgt tatcccggcg
    16081 cgcatgatta cgctactgac aaagcgctat atcactatac tcaggaactg aaaagtcagt
    16141 ttctgcgcaa tgcgccgccc atcaataaag tgatgtatga cagcaagatc catgtgctga
    16201 aaaatgcgct gggactgcat accgctgtct cgcgcgttca gggcggcaag ctcaaggcca
    16261 aggcggagat ccgcgtcgcc accgtgtttc gcaacgcccc ggagccattc ttacgaatga
    16321 ttgtggttca cgaactggcg cacctgaaag agaaagatca taacaaagcg ttttatcagc
    16381 tctgctgcca tatggagccg cagtaccatc aactggaatt tgatacgcgc ctgtggctga
    16441 cgcatcaggc gctgtcggca caataaattc tgaaaatgcc ccttcccccg tatcttttta
    16501 acggcgtggg cataaaatcg acgcgttcac atttcgctca ttgcctgccg ccacctcaag
    16561 gatgacgatc tgtagagggt attttttatc caccgccaac ggaaccgcgc aacaaccatg
    16621 ctctcacaat gtgcccgttt tatccgccgc ctctgtttta cacgccgggc gttaacagtg
    16681 gcgtgttttc tgcttgtcgc agcaggcgtc gcgcttttct attccaactg gcttatcgtc
    16741 aacgcctcac agcatctgac atggaatgac attcagaccg ttcccgcccg caatgtcggg
    16801 ctggtattag gcgccaaacc cggcaatcgg tattttaccc ggcggattaa tactgccgcc
    16861 gcgttgtacc acgccggtaa agtgaagtgg ctgttagtca gcggcgataa cggcaaaaaa
    16921 gagtacgatg aaccttcggc gatgcagcag gcgctgatag cgaaaggtgt gccggaagcg
    16981 gccatttttt gtgattatgc cggattctcc acgctggact ccgtggttcg cgcccggaaa
    17041 gtgtttggcg aaagccgcat tacgattatc tcgcaagcat ttcataatca acgggcgatc
    17101 tggctggcgc aacaatatgg cattgacgct atcggcgtta acgcgccgga tctgaataaa
    17161 aggcacggaa cctacacacg acttcgggaa aagctggcgc gggttagcgc agtgctggat
    17221 gccaaaattt tgcatcgtca gcctaaatat ctgggcgctg gcgtcactat tggggctgat
    17281 agcgcacacg ggtgcccttc tcgccagtaa aatgccagag tgcgtcgcag cgcactggca
    17341 agggcggaaa ggcgtgctac attgacgaaa atccctttct ggagtccgct gacgtttatg
    17401 atacgtttcg ctgtaattgg gactaactgg atcacgcgcc agtttgtcga cgccgcccat
    17461 gaaaccggca aattcaggct cgccgccgtt tactcccgta gacttgaaca ggcgcagtct
    17521 ttcgcaaatg attatcccgt cgagcatctg tttacctcgc tggaagcgat ggcgcaaagc
    17581 gacgcgattg aggcggttta tatcgccagc ccgaattccc tgcatttctc ccagacgcag
    17641 cgctttttgc agcataaaaa acatgtcatg tgcgaaaagc cgctggcttc taacctggcg
    17701 gaggttgatg ccgctatcgc ctgcgcgcgc gataatcagc gggtactgtt tgaagccttt
    17761 aaaaccgcct gcctgcccaa tttcctgctg ctgcgggaat cgttgccgaa aatcggcaga
    17821 atgcataaag cattactaaa ttactgccag tactcttcac gttatcagcg ctatctgaac
    17881 ggtgaaaatc cgaatacgtt taatccggcc ttctccaatg gttcgattat ggatatcggg
    17941 tattactgtc tggcgtcggc gatcgcgcta tggggcgagc cgcgcagcgt tcaggcgtcg
    18001 gcgaatttat tggaaagcgg agtagatgca cacggcgtcg tggttatgga ttacggcgat
    18061 tttagcgtca cgctacagca ttccaaagtc agcgactcgg tactggccag tgaaattcag
    18121 ggcgagaggg gatcgctggt cattgaaaag ctgtcggaat gccagaaagt gtgttttgcg
    18181 ccgcgcggcg cgctgatgca ggatctgacc cagcctcagc atattaatac catgctgtat
    18241 gaagccgggg cgtttgccca gcttattgaa aaccacgccg tggaacatcc ggggttgtcg
    18301 ctaagtcgcg ccacggcaaa atggctgaca gaaatacgcc gtcaaaccgg ggtcatcttc
    18361 ccggcggacg atctgactca tccccctact gcgtaaaatt atgtaaatcg tatgttacag
    18421 gtcattgact ctacgcgtgg cctgtcatac tttgttacgc gcaaagggga gtaacttcat
    18481 tgccggtcga tcgtcattac gatgtgtgca aaaccacatc cggtcaccgg gcagccataa
    18541 aggaatgcgt cagcgtattc ctttattgtt gtaagtgaga ccttgccgaa tggcaaggtc
    18601 tatgcataaa agcagcggct aatgccattc ggcattagcc gtttttttgc atggggagaa
    18661 ataatgaata ctgttggtac gccattatta tggggtggat tcgcggttgt tgtggtgata
    18721 atgctatcca tcgacttgtt gttgcaggga cgccgtggcg cacatgcgat gtcgatgaaa
    18781 caagcggcag gatggtcaat cctgtgggta acgctctcgc tactgtttaa cgccgctttc
    18841 tggtggtatc tggctgaaac gcaagggcgc gaagttgctg acccgcaggc attagcgttc
    18901 cttaccggct atctgattga aaagtcgctg gccgtagata acgtctttgt ctggctgatg
    18961 ctgtttagct atttctccgt ccctccggct ctgcaacgcc gggtgctggt gtatggggtt
    19021 cttggcgcga tcgtgttgcg tactatcatg attttcgccg gtacctggct tatcactcag
    19081 ttcgaatggc tgctgtatgt gttcggcgcc ttcttgctgt ttaccggcgt aaaaatggcg
    19141 ctggcgaagg aagacgaatc cggcattggc gaaaaaccga tggtgcgttg gctgcgcggg
    19201 catctgcgca tgactgatac gatcgagaac gagcactttt tcgtacgtaa aaacggcctg
    19261 ctatatgcca cgccgctgct gctggtgctg attatggttg agttcagcga tgtgatcttc
    19321 gccgttgaca gtattccggc gatctttgcg gtcaccaccg acccgttcat cgtactgacc
    19381 tctaacctgt ttgccatctt aggactgcgc gcgatgtact tcctgctgtc cggcgtggcg
    19441 gaacgcttct cgatgctgaa atatggtctg gcggtcattc tggtctttat cggcattaag
    19501 atgctgatcg tcgacttcta ccatattcct atcgcgattt cgctgggcgt agtgtttggc
    19561 attctgacca ttacgctggt gattaacacc tgggttaacc atcagcgcga taagaaacta
    19621 cgagcgcaat aatcttttat cggggtaaac ctgccccatc aaaaacgccc ggcagcgtac
    19681 acctgccggg cgtttttgtt taacatgtca caatactgtt aatataaagt tataaaacat
    19741 gatcacagca aaaaatccag gatatttcgc ttcccgaacc ttcaactttc cttatactca
    19801 accaggcaaa cactttgtta catcctgaaa gatgcgccgt aagagcgtgc aggggatgac
    19861 cagcaacaca atacaaggaa tatgaaatgg ctacgcaacg agcatcaggg ctactgcagc
    19921 gtttagcgca aggcagtctg gttaaacaaa ttttagtggg tctggtactg gggattttac
    19981 tggcatggat ttctaagcct gtggcagaag cggttggctt gcttggcacc ctgttcgtcg
    20041 gcgccttaaa agcggtcgcc cccgttctgg tgctgatgct ggtaatggcc tcgatcgcca
    20101 accaccagca cggccaaaaa accaatattc gccctattct ctttctttac ctgctaggca
    20161 ccttttcagc cgcgctggcg gccgttgtgt tcagcttcgc cttcccttca acgctgcatc
    20221 tgtccagtag cgcccaggat atcgtgccgc cgtccggcat tgtagaagtc ctgcgcggtc
    20281 tgctgatgag catggtgtcg aaccccatcg acgcactgct gaacgctaac tatatcggga
    20341 ttctggtgtg ggccgtcggt ctgggatttg ccctgcgtca tggcaatgaa accaccaaaa
    20401 acctcgtgaa cgatatgtct aacgccgtga cctttatggt gaaactggtg atccgtttcg
    20461 cgccagtcgg tatttttggt ctggtttcat caacgcttgc aaccaccggc ttctccaccc
    20521 tgtggggcta tgcgcacctg ctggtcgtct tgattggctg tatgctgctg gtcgcgctgg
    20581 tggtcaaccc gctgttggta ttctggaaaa ttcgtcgcaa cccttatccg ctggtgttcg
    20641 cctgcctgcg tgaaagcggt gtttatgcct tctttacccg cagttctgcc gccaatattc
    20701 cagtgaatat ggcgctgtgc gaaaaactga atctggacag ggatacttac tccgtttcca
    20761 ttccgctggg tgccactatc aatatggccg gcgcggcaat taccattacg gttctgacgt
    20821 tggcggcagt tcatacgtta ggcgtcccgg tggatctgcc tacagcgctg ctgctgagcg
    20881 tggtggcctc gctgtgtgct tgcggcgcct ccggcgtggc aggcggttca ttgctgctga
    20941 tcccgctggc gtgcaacatg tttggcatcc cgaacgatat cgcgatgcag gtagtagcgg
    21001 tcggctttat tatcggagta ttgcaggatt cgtgtgaaac ggcgctgaac tcatctaccg
    21061 atgttctgtt cactgcggca gcctgccagg cagaggacga acgtctggcg aataacgcct
    21121 tgcgtagcta agtgattatc aatgccggat ggcgcgtgcc atccggcgtg acgataaatc
    21181 agaatctccc aatccatagg ctgtgacgga aagcgaattg atgttcacgc gcgacatcct
    21241 cgcgtaacgt tatatgtaga tggcgtctgc cgcagcgctc ggtcagcgta aagtataaag
    21301 tgtcagcctg tgtaaatcct ctcgccaccc tcctttgcga taagcaaaat caaagctcaa
    21361 cgacgcgtaa tttctataac ggacttcgtt gacctttgtt acaattagat gcattttgaa
    21421 tttttgtgtg ttagtgcttg cttacttcac aacttaacaa ggaatagttc aggccgcgaa
    21481 tttgccgttt ccgcaacgct gataaaaact ccaactctgt tgcggcagtg caaacctcag
    21541 atcaccggcg tgacgttaac cgattctcca ggaatactga atggaactac tgactcaatt
    21601 gctgaatgcc ctgtgggctc aggactttga aacactggcc aatccttcca tgattggcat
    21661 gttatatttt gtgttattta tgattttgtt tctggaaaat gggctgctcc ctgccgcctt
    21721 tttgcctggc gacagcctgt tgatactggt cggcgtgctg atcgccaaag gcgcgatggg
    21781 ttttccacaa accattttgc tgcttaccgt cgcggccagc ctgggttgct gggtcagcta
    21841 tatacagggc cgctggctgg ggaatacccg caccgtgcag aattggctct ctcatctccc
    21901 cgcacattat catcaacgcg cccatcacct tttccataaa cacggcctgt cggcattatt
    21961 gataggccgt tttatcgcgt ttgtcagaac gctgctaccc accattgccg gcatatccgg
    22021 cctgaataac gcgcgctttc agtttttcaa ctggatgagt ggcttgttgt gggtgcttat
    22081 cctgacgtcg ctgggctatc tgctgggcaa aacgcccgtc tttatgaagt atgaagatca
    22141 gctaatgtca tgcctgatgc tgctgcccgt ggtgctgctc ttttttggcc tggcgggttc
    22201 actggtcatg ctgtggaaaa agaagtatgg gagccgggga taacttatgc ttaaaccacg
    22261 cataactgcc cgacaactca tttggatcag cgcttttctg ctgatgctga ccatactcat
    22321 gatgacgtgg tcaacgctgc gtcagcaaga gtcgacgctg gccattcgcg cggttaatca
    22381 gggcgccagt atgccagacg gcttctcagt tctgcatcat ctggatgcga acggcattca
    22441 ttttaaaagc attacgccta aaaatgacat gttgctcatt accttcgatt cccctgcgca
    22501 aagcgccgca gcaaaaacag tgcttgatca aacgttacca cacggttatg tcgtcgctca
    22561 gcaggacgat gacaacgaaa cggtacagtg gttgtcccgc ttacgggaaa gctcacaccg
    22621 ctttggctaa tctccaggaa tccgaatcat atcactcact ttggtgattt cattgtttaa
    22681 tgactatgat taataaagcg gtgcttaacc caccgcgtta ttatcgggat caccgccccg
    22741 gacaacgggt ccgaacataa gggaaagttc aggaatgaaa taccgcatcg ctttggctat
    22801 cacgcttttt acgcttagcg ccggcagcta cgctaattcg ctttgtcagg aaaaagagca
    22861 ggatatacaa aaggaaatta gctacgctga aaagcacaac aatcagcgcc gtattgaggg
    22921 tctgaacaag gcgctcagcg aagtacgcgc caattgtact gacagcaagc tgcgcgccga
    22981 gcatcagaaa aagatcgctg agcaaaaaga agaggtagcc gaacgccaac gtgatttagc
    23041 cgaggcaaaa gcaaaaggcg atgcggataa aatagacaaa cgtgaacgta agctggccga
    23101 ggctcaggat gagctaaaaa aacttgaggc cagagactac taaattaacg ccgaatgtaa
    23161 atactcactc acctggagaa aactatgtcg aaagataaca ctacggaaca tctgcgcgct
    23221 gagttgaaat ccctgaccga tacgctcgaa gaagtgctga gctcttcggg cgaaaagtcg
    23281 aaagaagagt tgagtaagat tcgtagcaaa gccgagcgcg cgctgaaaga gagccgttac
    23341 cgcctgggcg aaacgggtga tgtgattgcc aaacagactc gcgtcgccgc cgcccgtgcc
    23401 gatgattatg tgcgcgaaaa cccctggaca ggcgtaggca ttggcgccgc tgtcggtctg
    23461 gtgttgggcg tactgctgac gcgtcgttaa ttatggcgga ctctcgacag gcacaaggac
    23521 caggcaaaag cgtactgggt atcgggcagc ggattgtcac cattatcgtt gagatggtgg
    23581 aaacccggct gcgactggcg gtagtagaac tggaagaaga gaaagcgaac ctctttcagc
    23641 ttttgctgat ggtaggtctt accatgctct tcgcggcgtt tggcttaatg agcctgatgg
    23701 ttctggtcat ctgggctatc gatcctcagt accgtttgaa cgcgatgatc gctaccacag
    23761 ttgtactgtt agtgcttgcg ctaatcggcg gcatctggac tttgcgcaaa gcgcgtcagt
    23821 ccacgctatt gcgccatacg cggcacgaac tggctaacga tcggcaaatt ctggaggacg
    23881 atcagtcgtg agcagcaaag gcgaacgcga aaaacgtaaa gcgctgcttc tcagtcagat
    23941 ccagcagcaa cggctggatc tgtccgccag ccgtcgcgac tggctggaga ccaccggcgc
    24001 gtacgatcgc ggctggaata cggtgttaag cctgcgctcc tgggcgctgg tcggtagcag
    24061 cgtaatggcc atctggacca tccgtcatcc taatatgttg gtacgctggg cgaaacgcgg
    24121 cctgggtatc tggagcgcct ggcgcctggt aaaaactacc ctccgtcaac aacagctccg
    24181 cggttaatat cttttctttt atagcatcgc gccatcaggt tatcacccga ttacacctgg
    24241 tggcgcgata cttttatgca tatcgtctct ttatcaatca ctcaaatttt ttgaaaaaat
    24301 ttggcaattt tccttgctaa caattcctgt acgccacgtt tatgattctc tccagcgata
    24361 acaatgacgc gctaaaccgc gccattgctc atgaaaatag cagcagccgc cgaatcggcc
    24421 tcctggagaa taaaatgaaa aaattagaag atattggtgt actgatagcg cgtattttaa
    24481 tgccagttct gtttattacc gcaggatggg gaaaaattag cggctatgcg ggcacacagc
    24541 agtatatgga agcgatgggc gtaccaggat tcctgctgcc gctcaccata ctgcttgagt
    24601 tcggcggcgg tctggcgatt ctgctggggt tcctcacccg caccactgcg cttttcaccg
    24661 ctggttttac gttgctgacg gcattgatct tccatagcaa ttttgcagaa ggtgtaaact
    24721 cgctgatgtt tatgaaaaac ctgaccattg ccggaggatt cttattactg gcgttaaccg
    24781 ggcctggcgc gttcagcctt gaccgtctgc tgaataaaaa gtggtaagca atctatactc
    24841 aattaaaaaa gcgagggaat agcgcctcgc ttttgttatc tgaaggagag agacatggga
    24901 caactgatcg atggcgtctg gcacgatacc tggtatgaca ccaaatcttc cggggggaaa
    24961 tttcagcgtt cagcgtcggc tttccgcaac tggcttaccg ctgacggcgc gcccggacct
    25021 tccggcgaag gcggattcgc cgcagaaaaa gatcgttacc atctgtacgt ttcccttgcc
    25081 tgcccctggg cgcatcgcac gctcattttc cgtaaactga aaggtctgga gccgtttatt
    25141 ccggtttctg tcgtgaatcc attgatgctg gaaaacggct ggacgtttga tgatactttt
    25201 ccggcggcca ccggcgatac cctctatcag catgaatttc tctaccagtt gtatctgcac
    25261 gccgatccac actacagcgg ccgcgtcacc gtgccggtct tatgggataa aaaaaatcat
    25321 actatcgtca gcaacgagtc cgccgaaatc attcgtatgt ttaactccgc tttcgatggg
    25381 ctgggcgcta aagccgggga ttactatccc cccgcgctgc aaagcaaaat tgacgagtta
    25441 aacggctgga tttatgacaa cgttaataac ggcgtttata aagcaggctt cgccactagc
    25501 cagcaagcgt atgatgaagc ggtagaaaag gtgtttactg cgctggcgcg cctggaacag
    25561 attctcggac agcaccgcta tctgacgggc aaccagttga ccgaggcgga tatccgctta
    25621 tggacgaccc tggtacgctt tgatccggtt tacgtgactc atttcaaatg cgacaaatac
    25681 cgaatcagcg actacctgaa tctgtacggt ttcctgcgcg atatctatca aataccgggc
    25741 attgctgaaa ccgtcaatat ggaccatatt cgtcaccact atttccgtag ccataaaacg
    25801 attaacccca cgggtatcat ttctgtcgga ccgtggcagg atctgctcga acctcacggg
    25861 cacgacgtgc gctttggcta atttcaggcg tcctccggga cgccttatta ataaatgcca
    25921 caaatattta ccagcatttc attcgcagct attcttagtt tgattacttt aaaaacaagt
    25981 gattgaacca ttattgaggc gaaaatggat tggtatttaa aggttttaaa aaattatctg
    26041 ggatttggcg gccgcgcgcg acgcaaagag tactggatgt ttattctggt caatatcatc
    26101 tttacctttg tgttgggcct gctggacgcc atgcttggct ggcaacgcgc cgggggtgaa
    26161 ggcgttctga ccaccattta cggcgttctg atctttttac cgtggtgggc cgtgcagttc
    26221 cgtcgtctgc atgacactga ccgctccgca tggtggctac tgttgctact tatccccatt
    26281 atcggctggc ttatcatcat cgcgttcaac tgccagaatg gtacaccggg cgacaaccgc
    26341 ttcggccccg atccgaaacg tttttcctga gggcggcgcg gcgccgcttt taaagcgccg
    26401 cgcgctattt attttccggc gaatagctta ggtatttccc gcaggcacca ggcttttgcc
    26461 tcccccatac tgtcgcgccg ccaggccata ataatatcga tttcgctggt cgattccggg
    26521 ctgactacgc gtagccgccc ttcggcaata tcctgttcca ccatcgaata tggcatcgtc
    26581 gcgacgccaa gcccggccag cagcgcctga cgtttatctt caatcgtgct taccgtcaga
    26641 cgtggctgct tatccagcag ttgcaccgtt aataccggcc gctcgcgcgc ggtatccgct
    26701 accgctacgc cgcggtattt aacccgcgtc acttccgaaa gcggctccgg ctcctgatga
    26761 atagagtggt caggcgcggc gacatacaca ttcattaacg tatacaactt acgggagtta
    26821 atttccgacg acgatcgaaa atgcatatcc ggggcgataa cgatatccgc ccgtccctgc
    26881 tcaagccgct cccatgcgcc agccagtact tcggtaatca atgaaagctg cgtattggct
    26941 ttagcggcca gccggtcgat cagcggaaaa aaagcaggcg tcggtaccag agcttcagtg
    27001 accagcgtca gatgcgtttc ccaaccgcgg gccaacgctt cagcatccgt cgttaacttg
    27061 tctgccgctt ccagcaatac ccgcccgcgt tccagcagca tacgtccgac gttggtgaat
    27121 tttgtacgat ggccggagcg atcgaacagt acaacgtcca actcttcttc cagcttctgc
    27181 atggtgtaac tcagcgcgga gggcacccgc cccaactcat cagccgctgc ggcaaaactg
    27241 ccccggcggt caatggcgtc catcacacgc aatgcttcaa gcgtcagcgc tctctcttta
    27301 gccataacgt tctcattcag gaaatttgaa cataccgggc agaatatctg gctaacaatg
    27361 cagcgtccag ccccttaaca taaaaggaag taaagagagg ttaataacga tgattacgac
    27421 ccgaaccgcc aaacaatgtg gacaggcaga ctacggatgg ctacaggccc gctatacctt
    27481 ctcctttgga cactacttcg accctacact gctgggctac gcgtcgttgc gcgtactgaa
    27541 ccaggaagtg ctggcgccgg gcgcctcttt tcagcctcga acttatccaa aggtggatat
    27601 tttaaacctg attctggacg gcgaagcgga ataccgcgac agcgacggca accatgtaca
    27661 ggctaaagcg ggcgaagcgt tgctgctcgc cgcgcagccg ggcattagct acagcgaaca
    27721 taatctcagc aaagttaagc cgttaacccg aatgcaactg tggcttgacg cctgtcctga
    27781 acgggaaaac gcgctggtac aaaaaatccc actctcgacg gcgcaacaac agcttcttgc
    27841 ctcgcccgac ggtgagcaaa acagcttaca actgcgccaa caggtctggg tacatcatat
    27901 tacgctggag aaaggcgaat cgcttaactt ccagcttcac gggccgcgcg cctatttgca
    27961 gtcgattcac ggtacgttcc acgcgatgac gcacaacgaa gaacgcgagg cgttaacctg
    28021 cggagatggc gcatttattc gtgatgaacc taacattacg ctggttgccg atacgccgct
    28081 gcgcgcatta ctggtagatt taccggtgta gccagccaga aaaggagtcg caagatgagc
    28141 aaaaaatcgg cgaagaaacg tcagcccgtg gtaaaacctg ccgtacagga ggcgatgagc
    28201 gccgctgtgc cgctgggcta tgaagagatg ctaaccgaac tggaagccat cgtggcggac
    28261 gccgaagccc ggctggcaga agaagaggcc gcagcctgaa atcatgccgg atggcggcgc
    28321 aagcgcccga tccggctgat aacgggtaga cccgataagc gcagcgccat cgggcaacac
    28381 gctgccccga cgtcatgccg gggcgttatt attaatgcgc tttactggcc ataatctcga
    28441 tgatctgctt gtctgtctgc tgcattgagc gacacgccag cgaacacaaa ttcgaaatag
    28501 attgttcgac attgtgcgcc acaatccctt cgtttccggt caccgccgta tcatccaacg
    28561 ccatcagtac ggctttccac gccgccgacg cgctggtaga gactttcatc gcgcagctat
    28621 tcgacgcgcc atcgcaaatc atcccgctga catcaccaat catactgctg atagccattg
    28681 cgatagtgtc gtaacgacca tctatcagcc acgccatacc cgctgccgcg cccattgccg
    28741 ccgtagttgc cgcgcacagc gccgacaaac gcggaagctg atggtgaata tagatagcgc
    28801 tcaaatgcga taac
//
LOCUS       DAGWFR010000035        28705 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.035, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000035 DAGWFR010000000
VERSION     DAGWFR010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 28705)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28705)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28705
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.035"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..281)
                     /locus_tag="MOX77_001618"
     CDS             complement(<1..281)
                     /locus_tag="MOX77_001618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AIR carboxylase family protein"
                     /protein_id="HCA3357182.1"
                     /translation="MSSRNNPARVAIVMGSKSDWATMQFAAEIFEILDVPHHVEVVSA
                     HRTPDKLFSFAETAEENGYQVIIAGAGGAAHLPGMIAAKTLVPVLGVPV"
     gene            complement(399..1121)
                     /gene="lpxH"
                     /locus_tag="MOX77_001619"
     CDS             complement(399..1121)
                     /gene="lpxH"
                     /locus_tag="MOX77_001619"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HCA3357183.1"
                     /translation="MATLFIADLHLQTEEPAIVAGFLRFLAVEARQADALYILGDLFE
                     AWIGDDDPNPLHREMAVAIKSLVDSGVPCFFIHGNRDFLIGKRFARESGMTLLPQEKV
                     LDLYGRNVLIMHGDTLCTDDAGYQAFRAKVHNPWVQRPFLTLPLFIRRRIAARMRAGS
                     KAANSSKSLDIMDVNAQTVVAEMEKHRVQWLIHGHTHRPAVHELSANGQPAFRVVLGA
                     WHHEGSMVKVTPDNVELIAFPL"
     gene            complement(1124..1618)
                     /gene="ppiB"
                     /locus_tag="MOX77_001620"
     CDS             complement(1124..1618)
                     /gene="ppiB"
                     /locus_tag="MOX77_001620"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017465360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase B"
                     /protein_id="HCA3357184.1"
                     /translation="MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRV
                     INGFMIQGGGFEPGMKQKATKEAIKNEANNGLKNTRGTLAMARTQAPHSATAQFFINV
                     ADNDFLNFSGESLQGWGYCVFAEVVEGMDVVDKIKGVATGRSGMHQDVPKEDVIIENV
                     TVSE"
     gene            1791..3176
                     /gene="cysS"
                     /locus_tag="MOX77_001621"
     CDS             1791..3176
                     /gene="cysS"
                     /locus_tag="MOX77_001621"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005125243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HCA3357185.1"
                     /translation="MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTF
                     VAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDA
                     LNILRPDSEPRATHHIQEIIELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDL
                     EQLQAGARVDVVDVKRNPMDFVLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLG
                     NHFDIHGGGSDLMFPHHENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFT
                     VRDVLKYYDAETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDKSAAPAG
                     GEAFEARFVEAMNDDFNTPEAYSVLFDMAREVNRLKGEDMTAANAMASHLRKISGVLG
                     LLEQEPDVFLQSGAQADDGEVAEIEALIQQRLDARKAKDWAAADAARDRLTEMGIILE
                     DGPQGTTWRRK"
     gene            complement(3267..3815)
                     /locus_tag="MOX77_001622"
     CDS             complement(3267..3815)
                     /locus_tag="MOX77_001622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001728132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HCA3357186.1"
                     /translation="MPTVITHAAVPLCLGAGLGLKVIPPRLLFAGVVLAMLPDADVLA
                     FKFGVAYGNVFGHRGFTHSLLFAFVLPLLCVLAGRRWFRAGQVRCWLFLTVSLLSHSL
                     LDSITTGGKGVGWLWPWSDERFFAPWQVIKVAPFALSSYITPYGHQVIVSELLWVWLP
                     GGVLIGILGWHRWRIGDEKRTR"
     gene            complement(3899..4111)
                     /gene="ybcJ"
                     /locus_tag="MOX77_001623"
     CDS             complement(3899..4111)
                     /gene="ybcJ"
                     /locus_tag="MOX77_001623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated protein YbcJ"
                     /protein_id="HCA3357187.1"
                     /translation="MATFSLGKHPHVELCDLLKLEGWSESGAQAKIAIADGLVKVDGA
                     VETRKRCKIVAGQTVSFEGQSVNVVA"
     gene            complement(4113..4979)
                     /gene="folD"
                     /locus_tag="MOX77_001624"
     CDS             complement(4113..4979)
                     /gene="folD"
                     /locus_tag="MOX77_001624"
                     /EC_number="1.5.1.5"
                     /EC_number="3.5.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HCA3357188.1"
                     /translation="MAAKIIDGKTIAQQVRSEVAQKVQARVAAGLRAPGLAVVLVGSN
                     PASQIYVASKRKACDEVGFVSHSYDLPETTSEAELLALIDTLNADNTIDGILVQLPLP
                     AGIDNVKVLERIAPDKDVDGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNIDTYGL
                     NAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKDLRHHVEHADLLIVAVGKPGFIPG
                     EWIKEGAIVIDVGINRLENGKVVGDVVFDEAAARASYITPVPGGVGPMTVATLIENTL
                     QACIEYHDPQGK"
     gene            5526..6080
                     /gene="fimA"
                     /locus_tag="MOX77_001625"
     CDS             5526..6080
                     /gene="fimA"
                     /locus_tag="MOX77_001625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459538.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrial protein subunit FimA"
                     /protein_id="HCA3357189.1"
                     /translation="MKHKLMTSTIASLMFVAGAAVAADPTPVSVSGGTIHFEGKLVYA
                     ACAVSTKSADQTVTLGQYRTASFTAIGDTTAQVPFSIVLNDCDPKVAATAAVAFSGQA
                     DNTNTNLLAVSSADNSTTATGVGIEILDNTSSPLKPDGATFSAKQALVEGTNTLRFTA
                     RYKATAAATPGQANADATFIMKYE"
     gene            6155..6688
                     /gene="fimI"
                     /locus_tag="MOX77_001626"
     CDS             6155..6688
                     /gene="fimI"
                     /locus_tag="MOX77_001626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrial protein subunit FimI"
                     /protein_id="HCA3357190.1"
                     /translation="MIRKGAALVGLVLMSPVIAQPVMVESGRVHLRGQLVNGGCAVAT
                     ESQDLRVLMGQYRTNAFTGPGSFAPVSVPFSLRLISCSAEVWRHVGIAFAGVTPAEDP
                     HVFLASGEGIGNAGIGLALFDDQQRQIIPNTLPLHYAPILTSEMTLHFTARYRAISEN
                     MTPGRIHSEVWFTLVYP"
     gene            6732..7424
                     /gene="fimC"
                     /locus_tag="MOX77_001627"
     CDS             6732..7424
                     /gene="fimC"
                     /locus_tag="MOX77_001627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbria chaperone FimC"
                     /protein_id="HCA3357191.1"
                     /translation="MLNSIKLGFIVLLTLFTSLNVQAAGGIALGATRVIYPSAAKQTS
                     LAISNSDTQERYLVNSWIENNAGQKEKTFIVTPPLFVSEPKSENTLRIIYAGQPLPED
                     RESLFWMNVKAIPSVDKSHIEGKNVLQLAILSRIKLFVRPANLPQTPEDAPTLLKFSR
                     VGNHLKITNPSAYYLTLVNISVGAKKIDNVMIAPKSDMQIPLPTGAQGSVTFQTVNDY
                     GALTSATTASLG"
     gene            7455..10067
                     /locus_tag="MOX77_001628"
     CDS             7455..10067
                     /locus_tag="MOX77_001628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial biogenesis usher protein"
                     /protein_id="HCA3357192.1"
                     /translation="MKKTTWFAGRFPGYVSPLSGVALSVLAALCPLTSRGESYFNPAF
                     LSADTASVADLSRFEKGNHQPPGIYRVDIWRNDEFVATQDIRFEAGAVGAGDKSGGLM
                     PCFTPERIKRLGVNTAVFPVSDKGVDTTCIHLPEKIPGAEVAFDFASMRLNISLPQAS
                     LLNSARGYIPPEEWDEGIPAALINYSFTGSRGTDSDSYFLSLLSGLNYGPWRLRNNGA
                     WSYSKGDGYHSQRWNNIGTWVQRAIIPLKSELVMGDSHTGNDVFDSVGFRGARLYSSD
                     NMYPDSLQGYAPTVRGIARTAAKLTIRQNGYVIYQSYVPPGAFAITDLNPTSSSGDLE
                     VTVDEKDGSQQRYTVPYSTVPLLQREGRVKYDLVAGDFRSGNSQQSSLFFFQGTVIAG
                     LPAGLTAYGGTQLADRYRAVVVGAGQNLGDWGAVSVDVTHARSQLADDSTHQGQSLRF
                     LYAKSLNNYGTNFQLLGYRYSTRGFYTLDDVAYRSMEGYDYEYDSDGRRHKVPVAQSY
                     HNLRYSKKGRFQVNISQNLGNYGSLYLSGSQQNYWNTADTNTWYQLGYASGWQGISYS
                     LSWSWSESVGISGADRILAFNMSVPFSVLTGRRYARDTILDRTYATFNANRNRDGDNS
                     WQTGVGGTLLEGRNLSYSVTQGRSSTNGHSGSASASWQATYGTLGVGYNYDRDQHDYN
                     WQLSGGVVGHTDGITFSQPLGDTNVLIKAPGAKGVRIENQTGVKTDWRGYAVMPYATV
                     YRYNRVALDTNTMDNHTDVENNVSSVVPTEGALVRAAFDTRIGVRAIITARLGGRPLP
                     FGAIVRETASGITSMVGDDGQIYLSGLPLKGELFIQWGEGKNARCIAPYALAEDSLKQ
                     AITIASATCIRPSS"
     gene            10082..11089
                     /gene="fimH"
                     /locus_tag="MOX77_001629"
     CDS             10082..11089
                     /gene="fimH"
                     /locus_tag="MOX77_001629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrin D-mannose specific adhesin FimH"
                     /protein_id="HCA3357193.1"
                     /translation="MKIYSALLLAGTALFFTHPALATVCRNSNGTATDIFYDLSDVFT
                     SGNNQPGQVVTLLKKSDWCGVNATCPAGTTVNYTYRSYVSELPVQSTEGNFKYLKLND
                     YLLGAMSITDSVAGVFYPPRNYIRMGVDSNVSQQKPFGVQDSKLVFKLKVIRPFINIV
                     TIPRQTMFTVYVTTSTGDALSTPVYTISYSGKVEVPQNCEVNAGQVVEFDFGDIGAPL
                     FSQAGAGNRPQGVTPQAKTIAIKCTNVAAQAYLSMRLEAEKASGQAMVSDNPDLGFVV
                     ANSNGTPLTPNNLSSKIPFHLDDNAAARVGIRAWPISVTGNKPAEGPFTARGYLRVDY
                     D"
     gene            11099..11617
                     /gene="sfmF"
                     /locus_tag="MOX77_001630"
     CDS             11099..11617
                     /gene="sfmF"
                     /locus_tag="MOX77_001630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria assembly protein"
                     /protein_id="HCA3357194.1"
                     /translation="MILRRVFIAIGCVLLSPLSQANSSLGEVNIELRGNVVDFTCAVV
                     AGDSNKSVNLGTWPTKQLHVAGDATQPVAFSLKLEGCPPGSASITFSGTPAPGTALLA
                     LADTAMAQKLAIEIRDGDQRRLPLEQASKAVDIDNNGNATLKFYANYIALADGVQPGL
                     ANADATFLINYN"
     gene            complement(11663..12295)
                     /gene="fimZ"
                     /locus_tag="MOX77_001631"
     CDS             complement(11663..12295)
                     /gene="fimZ"
                     /locus_tag="MOX77_001631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria biosynthesis transcriptional regulator
                     FimZ"
                     /protein_id="HCA3357195.1"
                     /translation="MKPASVIIMDEHPIVRMSIEVLLGKNSNIQVVLKTDDSRTAIEY
                     LRTYPVDLVILDIELPGTDGFTLLKRIKSIQEHTRILFLSSKSEAFYAGRAIRAGANG
                     FVSKRKDLNDIYNAVKIILSGYSFFPSETLNFISNTRPPKGGHHDMPLSNREVTVLRY
                     LANGMSNKEIAEQLLLSNKTISAHKANIFSKLGLHSIVELIDYAKSHELL"
     gene            complement(12899..13621)
                     /gene="fimY"
                     /locus_tag="MOX77_001632"
     CDS             complement(12899..13621)
                     /gene="fimY"
                     /locus_tag="MOX77_001632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria biosynthesis regulator FimY"
                     /protein_id="HCA3357196.1"
                     /translation="MRSVPCRERHRRLRNAKDCACRYHSPTPQIFDRLELLNQQLNYA
                     LPVGIISQAIITTDNYLGYSLSHYLFSGKRTAAFRSLDDISLWIEKGSLRQLIVDMET
                     LPVSCIEALNQLHALSWQQSDIQIYLLVSDKTPAIAQFIRMAGRFFVLSRRQNLASVR
                     EALLSAAEPRLSESFSRTDWLMIETLAQGASLKEIARQQSVPYHRVVYRLKQLITLLN
                     LPHRQSFLRLIQQLNVTFHDIF"
     gene            complement(13640..13951)
                     /locus_tag="MOX77_001633"
     CDS             complement(13640..13951)
                     /locus_tag="MOX77_001633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HCA3357197.1"
                     /translation="MVAQGTLLKERINPPHLASSPTRHSYLNSGLLKSEPIVHLSTAQ
                     LIGYEVLTQLPSEHDSEVFFQQLMLMEGIETSEQRGIAFYAGATMGQGYLWPAILPDI
                     Y"
     gene            complement(14113..14709)
                     /gene="fimW"
                     /locus_tag="MOX77_001634"
     CDS             complement(14113..14709)
                     /gene="fimW"
                     /locus_tag="MOX77_001634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria biosynthesis transcriptional regulator
                     FimW"
                     /protein_id="HCA3357198.1"
                     /translation="MLSIAIKEQNSHFEHGLKIIMTRLANQWQQKIDFLPPEEIDNAD
                     IAFLTLDDDWFSAGCYQIPMHTQHQLRVIICNKCDKEKLMFRPCLYMLPHIYREDDVE
                     EITRKMILILHKRALRHSVPSGICHYCTTRHFSVTERHLLKLIASGYHLSETAALLSL
                     SEEQTKSLRRSIMRKLHVKTEQQFLKYIRVNLHFLLSK"
     gene            14964..15040
                     /locus_tag="MOX77_001635"
     tRNA            14964..15040
                     /locus_tag="MOX77_001635"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:14998..15000,aa:Arg,seq:tct)
     gene            complement(15062..15184)
                     /locus_tag="MOX77_001636"
                     /pseudo
     CDS             complement(15062..15184)
                     /locus_tag="MOX77_001636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415069.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
     gene            complement(15156..15823)
                     /locus_tag="MOX77_001637"
                     /pseudo
     CDS             complement(15156..15823)
                     /locus_tag="MOX77_001637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611920.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            complement(16209..17861)
                     /locus_tag="MOX77_001638"
     CDS             complement(16209..17861)
                     /locus_tag="MOX77_001638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357199.1"
                     /translation="MGRKMVNNRLKMVIAILIVFSLVYSIGFITPMNSDDYTYALREL
                     SLSSVKMHYLGWSGRVVSDTLSTSLLKFFSPHIYNAINSAALTLMVLCWTMIPATLTK
                     SSPSPYVMIFLFFLYFIANPALGQTNFWLVGLANYLWTNMFIAIYILISIYLSNAKKS
                     NLILFVYAISSIFAGCSNENTSLVVVLISVAYFFIMNRNKYLLIGVFGSAIGAGVLLL
                     APGNLSRASTIQDWYNQPLAWRVLEHFSERLPSAMGAYWQVYIAFIILLISVVLSRNS
                     SSKLMFGSFLFILGAIAANVAFLASPAMPSRALNGALCFMILSISFVAHSAFTKFNKA
                     SIYLSITTYAMAFLYFIPSYILYYSSIKSISKQTEIREEIIDRAKDNKQDQAIIPDYY
                     FPPVLHAGPSLDTFNSEAMSRYYGIDVKITAPGFFDYSRAFNLKPLNINAKICNNVYI
                     KSLWIYKQQMGIKTFVIFEFNKNPADSLDENTAMFISLKTKDGKVINADVDKKTFQID
                     GRWLSGRAINGIDSNELESITSGTWDVRTGARTNENITEIIK"
     gene            complement(17842..18768)
                     /locus_tag="MOX77_001639"
     CDS             complement(17842..18768)
                     /locus_tag="MOX77_001639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HCA3357200.1"
                     /translation="MKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSK
                     DATESIINKIAASDPLVIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVI
                     PHLIEKWQAGADMVLAKRSDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMS
                     RDVVENIKQMPERNLFMKGVLSWVGGKTDVVGYARAERVAGDSKFNGWKLWNLALEGI
                     TSFSTFPLRIWTYIGLFIAGMSFLYGTWMIIDKLIFGNNVPGYPSLLVSVLFLGGVQL
                     IGIGILGEYIGRIYIETKKRPKYIIKNGKKNG"
     gene            complement(18765..19127)
                     /locus_tag="MOX77_001640"
     CDS             complement(18765..19127)
                     /locus_tag="MOX77_001640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GtrA family protein"
                     /protein_id="HCA3357201.1"
                     /translation="MLKLFAKYTSIGVLNTLIHWGVFAFCVYGMHTHQALANFSGFVI
                     AVSFSFYANARFTFNASTTTLRYMMYVGFMGTLSAVVGWMADKCSLPPLLTLVTFSAI
                     SLICGFIYSKFIVFRDAK"
     gene            complement(19530..19841)
                     /locus_tag="MOX77_001641"
     CDS             complement(19530..19841)
                     /locus_tag="MOX77_001641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001032257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-binding protein"
                     /protein_id="HCA3357202.1"
                     /translation="MNKFTSLLAVVFISAGVHTAEKMESRQLSATAHEMMNNGDAFAH
                     QQMAQTQKPSAPTTVENATPFSEMDDYEKAMVIHQSMNNAHSFSHEIQAEEHHKQIKR
                     N"
     gene            complement(19973..20168)
                     /locus_tag="MOX77_001642"
                     /pseudo
     CDS             complement(19973..20168)
                     /locus_tag="MOX77_001642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000635961.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="two-component sensor histidine kinase"
     gene            20072..20284
                     /locus_tag="MOX77_001643"
     CDS             20072..20284
                     /locus_tag="MOX77_001643"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357203.1"
                     /translation="MPGLYRGLPLYAGGREQRDKNDRKGAGSEVMSRIATPMIGGMIT
                     APLLSLFIIPAAYKLMWLRRHRRLAA"
     gene            complement(20335..21189)
                     /locus_tag="MOX77_001644"
     CDS             complement(20335..21189)
                     /locus_tag="MOX77_001644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HCA3357204.1"
                     /translation="MDALSRLLTLNAPQGSIDKNCPLGGDWQLPHAAGELSVIRWHTV
                     TQGEAQLEMPTGDAMTLTPGKVVILPQNSAHRLRQSGEAPTHIVCGSLRLHTTSRYFL
                     TALPEVLCLAPPPHSPASIWLNAAISLLQQESERHLPGADVLYSQQCATLFTLAIRDW
                     LSQAGTAKSVLNLLLHPRLGRVILHMLETPAHPWTVETLVQRVHMSRASFAQLFRDVS
                     ATTPLAVLTTLRLQIAAQTLSREALPVMVIAESVGYASESSFHKAFVREFGCTPGEYR
                     KRVNALGR"
     gene            21405..22730
                     /locus_tag="MOX77_001645"
     CDS             21405..22730
                     /locus_tag="MOX77_001645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridine nucleotide-disulfide oxidoreductase"
                     /protein_id="HCA3357205.1"
                     /translation="MTQYQALIIGFGKAGKTLAATLAKTGWRVAIIEQSASMFGGTCI
                     NIGCIPTKTLVYDAEREGDFSVAMQRKAAVVNFLRDKNFHNLADLDNVDVIEGRAEFI
                     DNHTLRVFQADGERVLRGEKIFINTGAESVIPAITGLTTTAGVFDSTGLLSLSQRPAR
                     LGILGGGYIGLEFASMFANFGTKVTIFEAAPQFLPREDRDIAQAITHILQEKGVELIL
                     NANVQAVSSTEGAVQVETPEGAHLVDALLVASGRKPATAGLQLQNAGVAVNERGGIIV
                     DDYLRTTADNIWAMGDVTGGLQFTYISLDDFRIVRDGLLGDGKRSTRDRQNVPYSVFM
                     TPPLSRVGLTEEQARASGATVQVVTLPVAAIPRARVMNDTRGVLKAVVDVNTQRIVGV
                     SLLCVDSHEMINIVKTVMDADLPYTVLRDQIFTHPTMSESLNDLFSLIK"
     gene            22887..23123
                     /locus_tag="MOX77_001646"
     CDS             22887..23123
                     /locus_tag="MOX77_001646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1471 domain-containing protein"
                     /protein_id="HCA3357206.1"
                     /translation="MLKVTTLIASLLAAPLAFSASAQPLTDVEYISVSAVSATPSMLE
                     DAIARLAQSKQASSWKITSMRIDNTGYATAILYK"
     gene            23136..23696
                     /locus_tag="MOX77_001647"
     CDS             23136..23696
                     /locus_tag="MOX77_001647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkgB family protein"
                     /protein_id="HCA3357207.1"
                     /translation="MDKYLRLLSQGDRLGLTLIRLSIAIVFIWIGLLKFVPYEADSIT
                     PFVANSPFMSFFYEHPEEYRQHLTHEGELKPEERAWQTANNTYAFSDGLGVVELIIAA
                     LVLANPVSRWLGLAGGVLAFLTPFVTLSFLITTPEAWVMPLGDAHYGFPYLSGAGRLV
                     LKDTLMLAGAVMIMADSARSLLLQRQ"
     gene            complement(23775..24950)
                     /locus_tag="MOX77_001648"
                     /pseudo
     CDS             complement(23775..24950)
                     /locus_tag="MOX77_001648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459559.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein"
     gene            25276..26670
                     /gene="pheP"
                     /locus_tag="MOX77_001649"
     CDS             25276..26670
                     /gene="pheP"
                     /locus_tag="MOX77_001649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine transporter"
                     /protein_id="HCA3357208.1"
                     /translation="MKNASTASGASVSDAASKNEPTLQRGLQNRHIQLIALGGAIGTG
                     LFLGIGPAIQMAGPAVLLGYGVAGIIAFLIMRQLGEMVVEEPVSGSFAHFAWKYWGPF
                     AGFLSGWNYWVMFVLVGMAELTAAGIYMQYWLPDVPTWVWAAVFFIIINAVNLVNVRL
                     YGETEFWFALIKVLAIIGMIGFGLWLLFSGHGGEHASIDNLWRYNGFFATGWHGLLLS
                     LAVIMFSFGGLELIGITAAEARDPQKSIPKAVNQVVYRILLFYIGSLVVLLALYPWVE
                     VKSNSSPFVMIFHNLDSNVVASALNFVILVASLSVYNSGVYSNSRMLFGLSVQGNAPK
                     FLTRVSHRGVPVNSLMLSGAITSLVVLINYLLPQKAFSLLMALVVATLLLNWIMICLA
                     HLRFRAAMRRKGRETQFKALFYPAGNYLCIAFLALILVLMCTMDDMRLSAILLPVWIV
                     FLFIAFTVLRRKAH"
     gene            complement(26712..27959)
                     /locus_tag="MOX77_001650"
     CDS             complement(26712..27959)
                     /locus_tag="MOX77_001650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HCA3357209.1"
                     /translation="MQELISQVEDLAGIEMNHTTSLVVIFGIIFLTAVVVHIILHWIV
                     LRAFEKRASASSRLWLQIITQNKLFHRLAFTLQGIIVNIQAALWLQKGSEAADILTTC
                     AQLWIMTYALLSLFSLLDVIFNLSQKWPAASQLPLKGIFQGIKLIGAIIVGILMISLL
                     IGQSPAILISGLGAMAAVLMLVFKDPILGLVAGIQLSANDMLKLGDWLEMPKYGADGA
                     VIDIGLTTVKVRNWDNTITTIPTWSLVSDSFKNWSGMSASGGRRIKRSINIDATSIHF
                     LDDDEKQRLLTAQLLKPYLTSRHQEIDEWNKQLDAPESALNHRRMTNIGTFRAYLNEY
                     LRHHPRIRKDMTLMVRQLAPDDHGLPIEIYAFTNTVVWLEYESIQADIFDHIFAVVEE
                     FGLRIHQTPTGSDIRALSGTLRH"
     gene            28270..>28705
                     /locus_tag="MOX77_001651"
     CDS             28270..>28705
                     /locus_tag="MOX77_001651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter domain-containing esterase"
                     /protein_id="HCA3357210.1"
                     /translation="MTQKRTLLKYGILSLALAAPLSACAFDSLTVIGDSLSDTGNNGR
                     WTWDSGQNKLYDEQLAERYGLALSPSSNGGSNYAAGGAMTAPELNPQDNTADQVRQWL
                     ANTGGKADHNGLYIHWVGGNDLAAAIARPAMAQQIAGNSATSA"
BASE COUNT         7100 a         6815 c         7405 g         7385 t
ORIGIN      
        1 tgtaccggca cgccgagtac cgggaccagc gtttttgccg caatcattcc cggcaggtgt
       61 gccgcgccgc ccgcgccggc aataatcact tgatatccgt tctcttccgc cgtttcggcg
      121 aagctgaaca gtttatcggg ggtgcgatgg gcggaaacca cttctacatg gtgcgggaca
      181 tccagaattt caaaaatttc ggcggcgaat tgcatggtag cccagtcgct tttggacccc
      241 atcacgatgg cgacacgcgc cggattattg cgggaagaca tgcgtcttaa aactcctgtg
      301 gtgcgggaca cgctgctttt gaggtgtcag agaatagcat gataatcagg caaggaaaac
      361 ggttgcgtgt gcgccgtaac ggacgattcg acgaacattt acagggggaa ggcgattaac
      421 tccacgttat ccggcgtgac ttttaccatt gaaccttcat gatgccatgc gcctaacacc
      481 acgcggaacg cgggctggcc gttggcggaa agttcatgca ccgccgggcg gtgggtgtga
      541 ccgtgaatca gccactgtac gcggtgtttt tccatttcgg cgacgacggt ctgcgcattg
      601 acgtccataa tatccagcga tttgctgctg ttggcggctt tactgccggc gcgcattctg
      661 gcggcgatac ggcggcggat aaacagcggc agggtaagga acggccgttg aacccacgga
      721 ttatggactt tggcgcgaaa cgcctgatat ccggcatcat cggtacagag cgtatcgccg
      781 tgcataatca acacattgcg gccatacagg tcgagcactt tttcctgcgg tagtagcgtc
      841 atgccgcttt cgcgggcaaa gcgtttgcca atcaggaagt cgcgattacc atgaataaag
      901 aagcaaggga cgccggaatc aaccagcgat ttaatggcaa cggccatttc acgatgtagc
      961 gggttggggt cgtcgtcgcc aatccaagcc tcgaagagat cgccaagaat atacagcgcg
     1021 tcggcctgac gggcttctac ggctaaaaaa cgcagaaaac cggcgacgat cgccggttct
     1081 tccgtttgca gatgcaagtc tgcaataaac agtgtcgcca cgattactcg ctgacggtca
     1141 cgttttcaat gatgacgtct tcttttggta cgtcctggtg cataccgcta cggccagtgg
     1201 cgacgccttt gattttatct accacgtcca taccttctac gacttccgca aagacgcagt
     1261 agccccagcc ctgcagactt tcgccggaga agttcaggaa gtcgttgtct gccacgttga
     1321 tgaagaattg cgcggtagcc gaatgtggtg cctgagtacg cgccatcgcc agcgtaccac
     1381 gggtattttt cagaccattg ttggcttcgt ttttgatcgc ctctttggtg gctttctgtt
     1441 tcatgcccgg ctcaaagccg ccgccctgaa tcataaaacc gttaatcaca cggtggaaaa
     1501 tggtgttgtt gtaaaaacct tcgcggcagt agtccaggaa gtttttaact gtttcaggcg
     1561 ctttatcatc aaaggttttg attacgatat cgccgtgatt agtgtggaaa gtaaccattt
     1621 ttgcatcctg ttccaagaga gtggtgcttt agcccgcaat ggggcacata taggggcttg
     1681 ttatagcata atcgtaagct gcgatcacct tgcaaagtgt gctgcttcaa ggttgaatta
     1741 tgagtattat acacacctaa ttacccacac acgtctatac ggaatcttcg atgttaaaaa
     1801 tttttaatac actgacgcgc caaaaagagg aattcaaacc cattcatgcc ggggaagtcg
     1861 gcatgtacgt gtgtggtatc accgtttacg atctctgcca cattggccac ggacgcacgt
     1921 ttgtcgcttt tgacgttgtc gcgcgctatt tgcgttttct cggttataag ctgaagtatg
     1981 tgcgtaacat taccgatatc gacgataaaa ttattaaacg cgccaatgaa aacggcgaaa
     2041 gttttgtcgc gctggtcgac agaatgattg cggaaatgca tcaggacttc gacgcgctga
     2101 atattctgcg tccggacagc gagccgcgtg cgacgcacca tattcaggaa attatcgagc
     2161 tcacccgcac cttaatcgag aaagggcacg cctatgtggc ggataacggc gatgtgatgt
     2221 ttgatgtacc gaccgatccg acttatgggc agctttcccg tcaggatctt gagcagcttc
     2281 aggcgggcgc gcgcgtggat gtcgttgacg tgaagcgtaa cccgatggac ttcgtgctgt
     2341 ggaaaatgtc gaaagagggc gagccgagct ggccgtcgcc gtggggcgaa gggcgtccgg
     2401 gctggcacat tgaatgttcg gcgatgaact gtaagcagtt gggcaaccat tttgatattc
     2461 acggcggcgg ttccgatctg atgttcccgc accatgaaaa cgagattgcc cagtctacct
     2521 gcgcgcatga cggcgaatac gtcaactact ggatgcactc cggtatggtg atggtggatc
     2581 gcgagaagat gtccaaatcg ctgggcaact tctttaccgt gcgcgacgtg ctgaaatact
     2641 acgatgcgga aaccgtgcgc tacttcctga tgtccgggca ttaccgtagc caactgaact
     2701 acagcgaaga gaacctcaag caggcgcgcg cctcgctgga gcggttatac actgcattgc
     2761 gtggaacgga taaatcagcg gccccggcgg gcggcgaagc gtttgaagcg cgtttcgtgg
     2821 aggcgatgaa tgacgatttc aatacgccgg aagcctactc cgtcctgttt gacatggcgc
     2881 gtgaagtcaa ccgtctgaag ggcgaagata tgaccgccgc gaatgcgatg gcgtctcatc
     2941 tgcggaagat ttccggcgtg ctgggactgc tggagcagga gccggatgtt ttcctgcaaa
     3001 gcggcgcgca ggcggatgac ggtgaagttg cggaaattga agccttgatt caacagcgtc
     3061 tggatgcccg taaagcgaaa gactgggcgg cggcggacgc ggcgcgcgat cgtctcactg
     3121 aaatgggtat tattctggaa gatggcccgc agggcaccac ctggcgacgt aagtaattgc
     3181 cgtattgccg gataagacgc agggcgtctt atccggccta cctgagatga aatctacagg
     3241 tcgggtaagc gtagcgccgt ccgacattag cgagtccgct tttcgtcccc tatacgccat
     3301 ctgtgccagc ccaatatccc tattagcacg ccccccggta gccacaccca tagcagctcc
     3361 gaaacaatca cctgatgccc atacggcgtg atgtagcttg aaagcgcaaa cggcgcgact
     3421 ttaattacct gccagggtgc aaagaaacgt tcatccgacc acggccacag ccatccgacg
     3481 cctttaccac ccgtggttat cgaatccagc aggctgtgcg acaacaatga aacggttaaa
     3541 aacagccagc agcgcacctg ccccgctcga aaccatcgtc gtcccgcgag tacgcacaac
     3601 agggggagga cgaatgcgaa aagtaaagag tgggtaaatc cgcgatggcc gaacacgttg
     3661 ccgtaggcga cgccaaattt aaaggccagc acgtcagcat cggggagcat cgccagcaca
     3721 acaccggcaa acagcaggcg aggagggata actttcaggc ctaagcctgc gccaagacac
     3781 agaggaacgg cggcgtgggt gataacggta ggcatagcga tcgttcacag ggaaatagcc
     3841 atgctagcag ttggaacgta gaggattaag tggatgatta tctgaaaaga cagcgtaatc
     3901 aggccacgac gttcacactt tggccttcga agctaacggt ttgcccggcg acaattttgc
     3961 agcgtttacg cgtttcaacc gcgccatcaa ccttcaccaa cccgtcggca atggcgattt
     4021 tcgcctgcgc gccgctttcg ctccagcctt ccagcttgag cagatcgcac agctcgacgt
     4081 gcgggtgctt gcctaaagag aatgtcgcca tgttattttc cttgtggatc gtgatattca
     4141 atgcacgcct gcagcgtgtt ttcgataagc gtggcgaccg tcatcgggcc gacgccgccc
     4201 ggtactggcg tgatgtatga cgcgcgcgcc gcggcttcgt caaacacgac gtcgccaacg
     4261 accttgccat tttccagacg gttaataccg acatcaatca caattgcgcc ttctttaatc
     4321 cattcgccgg gaataaagcc cggtttacca acggcgacaa tgagcaaatc agcatgctcg
     4381 acatgatgac gcagatcttt ggtaaagcgg tgcgtaacgg tagtcgtaca gccagccagc
     4441 agcagctcca tgctcatcgg gcgtccaacg atattagacg cgccaatgac caccgcattc
     4501 aggccgtagg tatcaatatt gtagcgctca agcagggtca caataccgcg gggcgtacag
     4561 ggacgcaggc gcggcgcacg ctggcacaga cgaccgacgt tataaggatg aaaaccgtct
     4621 acgtctttat ccggcgcgat acgctccagc actttaacgt tgtcgatacc tgccggtaaa
     4681 ggcaactgca ccagaatacc atcgatcgtg ttatctgcat tcagagtatc gataagcgcc
     4741 agcagttcgg cttcgctggt ggtttctggc aggtcatagg agtgggagac gaatcccact
     4801 tcgtcgcacg ctttacgttt gcttgcgaca taaatctgtg aggccggatt gctgccgacc
     4861 aacaccacag ccaggccggg agcgcgaaga cccgctgcga cgcgtgcctg aactttttga
     4921 gcaacctcag atcgcacctg ctgcgcaatc gttttaccgt caataatctt tgctgccatc
     4981 agagagaaga ttccatctgt tacttcaagt caaaggggat aacgctattt tgtcagaagc
     5041 gggcctcgct gtcagttaac gtttgtgttt ccgatgcaaa cgcgacgtct cccccgtccg
     5101 ttgacgatac tgagacgtga ccagtaagcg cgccatgatt aaccaaaaag aaacaattca
     5161 tcaccctggc tatggttacc gtaatccctc gccgttaata gcatcgggcg gcataatgcg
     5221 acattttata caaaataaga ttagaccctt cttatatcca aataagaatt agcttaggtc
     5281 attaaaagag tttgcggcta ttttttattt agcgaaatgt ttaatttatt accgtgacga
     5341 aatgtcatat tcgcaaagat taattactgc gtctgatact caggggagaa acagaaaact
     5401 aattaatctg cgatatctat ctttacagga tgcagagata acttttctga catgctatgt
     5461 cgataataat tcaaacggag ccgacaggat atcgaaaccg ggtgtgtgta attcaaggaa
     5521 aatccatgaa acataaatta atgacctcta ctattgcgag tctgatgttt gtcgctggcg
     5581 cagcggttgc ggctgatcct actccggtga gcgtgagcgg cggtactatt catttcgaag
     5641 gtaaactggt ttatgcagcc tgtgccgtta gcactaaatc cgccgatcaa acggtgacgc
     5701 tgggtcaata ccgtaccgcc agctttacgg cgattggtga tacgaccgcg caggtgcctt
     5761 tctccatcgt cctgaatgac tgcgatccaa aagtggcggc caccgctgcc gtggctttct
     5821 ctggtcaggc agataacacc aacactaatt tgctggcggt ctcctctgcg gacaatagca
     5881 ctaccgcaac cggcgtcggg attgagattc ttgataacac ctcctcaccg ttgaagccgg
     5941 acggcgcgac cttctcggcg aagcaggcgc tggttgaagg caccaatacg ctgcgtttta
     6001 ccgcacgcta taaggcaacc gccgccgcga cgccaggcca ggctaatgcc gacgccacct
     6061 ttatcatgaa atacgaataa tcccgtcagg gaacgccagg gaagggaggc gtctcaacgg
     6121 aagaggctat cggggataaa agagaacata gcagatgata aggaaaggcg cggcgctagt
     6181 ggggcttgtt ttgatgtcgc ccgtcattgc gcagccggta atggtagaga gcgggcgtgt
     6241 tcacctgcgc ggacaactgg tcaatggcgg ctgcgctgtc gccactgaaa gccaggattt
     6301 gcgcgtactg atgggacagt accgcacgaa tgcgtttacc ggtcctggca gcttcgctcc
     6361 cgtcagcgtt ccattttcgt tacggttaat ctcctgtagc gcggaggtct ggcgtcatgt
     6421 cggcattgcg tttgccggcg ttacgcctgc ggaagatccc catgtttttc tggccagcgg
     6481 cgaaggtatc ggtaatgccg gaatcggcct ggcgttattt gatgaccagc agcggcaaat
     6541 catacctaac acgttaccgc ttcattacgc gcccatttta acgtcagaaa tgactttgca
     6601 ttttaccgcc cgctatcggg caatttcaga aaatatgacg ccgggacgaa ttcattcaga
     6661 agtgtggttt acgctggttt acccatgaat tttcttgccg acgtgactca atgcaaaagg
     6721 tattttttac catgctgaat agtataaaat taggatttat tgttcttctc acgttattta
     6781 cttcgctgaa cgtacaggcg gcggggggga ttgcattagg cgccacgcgt gttatttatc
     6841 cctcggcggc gaaacagact tctctggcaa tcagtaatag cgatactcaa gaacgttacc
     6901 tcgtcaattc atggatcgaa aataacgctg ggcagaaaga aaaaacgttt atcgttacgc
     6961 cgcctttatt cgtcagcgag cccaaaagtg aaaacacgct gcgtattatc tacgccgggc
     7021 aaccgctacc cgaggatcgg gagtcgttat tctggatgaa cgtgaaagcc atcccgtcgg
     7081 tcgataaaag tcatattgaa ggaaaaaacg ttctgcaact ggcgattctg tcgcgcatca
     7141 aactgttcgt gcgtccggcg aatttgccgc agacgccgga agacgcgccg accttgctga
     7201 aattttcccg tgtcggcaac catctcaaga taaccaaccc atctgcttat tacctcacgc
     7261 tggtcaatat cagcgtgggt gcgaaaaaga ttgataacgt gatgatcgcg ccaaaaagcg
     7321 acatgcaaat tcccttaccg actggcgcgc agggcagcgt gacatttcag accgtcaatg
     7381 attacggcgc attgacgtcg gcgacaacag ccagtctcgg ttaagcagag agcgtgaagc
     7441 cacacgagaa cacgatgaag aagacaacct ggtttgcagg gcgatttccc ggctatgtat
     7501 caccgttaag cggcgtggcg ctgtcggtgt tggcagctct gtgtccgctg acgagccgcg
     7561 gcgaaagtta tttcaaccct gcgtttttgt cggcggatac cgcgtccgtg gcggatttat
     7621 ctcgctttga aaaaggtaat catcagcctc ccggtattta ccgggtggat atctggcgta
     7681 acgacgaatt cgtagcgacg caggatattc gttttgaggc gggcgccgtg ggcgccggcg
     7741 ataaatccgg cggcctgatg ccttgtttta caccggagag gattaaacgg ctgggcgtga
     7801 ataccgcggt gttccctgtc tcagataaag gcgtcgatac cacgtgtatt caccttcctg
     7861 agaaaatccc gggcgcggag gtcgcgttcg atttcgcgtc gatgcgctta aacattagct
     7921 tgccgcaggc gtcattgctc aacagcgcgc gtggctatat cccgccggaa gagtgggatg
     7981 aagggatacc cgccgcactc attaattaca gttttaccgg tagccgcgga acagacagcg
     8041 atagctattt tttgagtctg ctgagcgggt tgaactatgg cccctggcgg ctgcgtaata
     8101 acggagcctg gagctattcg aaaggggacg gctatcattc gcaacgctgg aacaacattg
     8161 gcacctgggt acagcgcgcc atcattccgc taaaaagcga actggtcatg ggggacagcc
     8221 ataccgggaa cgatgttttc gacagcgtcg gctttcgcgg agcgcggctg tactcttctg
     8281 acaatatgta tcccgatagc ctgcagggct acgcccccac ggtcagaggg atcgcccgga
     8341 cggcggcaaa gctgacgata cgacagaacg ggtatgttat ctaccaaagc tatgtgccgc
     8401 cgggcgcgtt tgcgattacc gatcttaatc ctacctcttc cagcggcgac cttgaggtga
     8461 cggtagatga aaaagacggt agccaacaac gttacacggt gccttactct accgttccgc
     8521 tattgcagcg tgagggcagg gtgaagtatg acctggtggc cggggatttt cgcagcggca
     8581 atagtcagca gtcttcgcta ttctttttcc agggaacggt gattgccggc ctgcctgcgg
     8641 ggctgacggc ttacggcggt acgcaacttg ccgatcgtta ccgtgctgtg gtggtcgggg
     8701 cggggcaaaa tttgggtgac tggggggccg tgtcggtcga tgtcacacat gcgcgtagcc
     8761 aactggcaga tgacagcacc catcaggggc aatcgttgcg ttttctgtac gccaaatcgc
     8821 tgaataatta cgggactaat tttcaattgc tgggttaccg ctattccacg cgcggatttt
     8881 acaccctgga tgatgtggca taccgcagta tggaagggta cgactacgaa tacgatagcg
     8941 acggacgccg ccataaagtg ccggtggcgc agagctacca caatctccgc tacagcaaaa
     9001 aaggccgctt tcaggtcaat atttcgcaaa atctggggaa ttacgggtca ctgtatcttt
     9061 ccggcagtca acaaaattac tggaatacgg cggataccaa tacctggtat caactgggat
     9121 acgccagtgg atggcaaggc ataagttatt cgctgtcatg gtcgtggagc gagtcggtgg
     9181 ggatctcagg cgccgaccgc attctggcat tcaatatgtc cgttccgttt agcgttctga
     9241 ccggacggcg ctatgcgcgc gacactattc ttgatcgtac ttatgccacg tttaacgcca
     9301 accgcaaccg cgacggcgac aatagctggc agaccggtgt gggcggcacg cttctggaag
     9361 gacgtaatct gagctacagc gtgacgcagg ggcgtagcag taccaatggt catagcggca
     9421 gcgccagcgc tagctggcag gcgacgtatg gcacgctggg cgtgggatat aactacgatc
     9481 gcgatcagca tgactataac tggcaacttt ccggcggcgt ggtcggtcat acggatggta
     9541 ttacgtttag ccaaccgttg ggcgatacca atgtcttgat taaagcgccg ggagcgaaag
     9601 gcgtgcgcat cgaaaaccag accggcgtga aaacggactg gcggggctat gcggtaatgc
     9661 cctacgccac ggtatatcgc tataaccgcg tcgcgttaga taccaacacg atggacaacc
     9721 ataccgatgt cgaaaataac gtcagcagcg tggtgccgac tgaaggcgcg ctggtgcggg
     9781 ctgcttttga tacgcggata ggcgtaaggg caatcattac cgcgaggctt ggcggacgtc
     9841 cgttaccgtt tggcgcgata gtacgagaaa ccgccagcgg cattaccagc atggtcggcg
     9901 atgacggaca aatttatctg agcggcttgc cgctaaaagg tgaactgttc atccagtggg
     9961 gagaggggaa aaacgcgcgt tgtatcgccc cttacgccct ggcggaggat agcctgaagc
    10021 aggcgattac gatagccagc gcgacctgta tccgtccgtc gtcataaaag gaaaaataga
    10081 gatgaaaata tactcagcgc tattgctggc ggggaccgca ctctttttca cccatcccgc
    10141 gctggcgacg gtttgccgta attcaaacgg gacggcgacc gatatctttt atgacctgtc
    10201 agatgttttc accagcggca ataatcagcc gggacaggtg gtgacgctgc tgaaaaaatc
    10261 agattggtgc ggcgtaaacg cgacgtgccc ggcggggaca acggtgaatt atacctaccg
    10321 aagctatgta tcagaattac cggtacaaag caccgaagga aattttaaat acctcaagtt
    10381 gaatgactac cttctgggcg cgatgagcat aaccgatagt gtcgctggcg tattttatcc
    10441 gccccgtaac tatattcgca tgggcgtcga ctctaacgtg tcgcagcaaa agccgtttgg
    10501 cgtgcaggac tcaaagctgg tttttaaatt aaaagtgata cggcctttta ttaatatagt
    10561 gacgatcccc cgccagacaa tgtttaccgt ctatgtgacg acctctaccg gcgacgcgtt
    10621 gagcacgccg gtgtatacca ttagctacag cggcaaagtg gaagtaccgc aaaactgtga
    10681 agtgaatgcc ggacaggtcg tggagtttga tttcggcgat atcggcgcgc cgttatttag
    10741 tcaggcggga gcgggtaatc gtccgcaagg cgtcacgccg caagcgaaaa ctatcgctat
    10801 caaatgtacc aacgtcgcgg cgcaagccta tttatcgatg cggcttgaag ccgaaaaggc
    10861 ctcagggcag gcgatggtgt ccgataaccc ggatttaggc tttgtggttg ctaatagcaa
    10921 cggtacgccg ctcacaccca ataatttgtc gagtaaaatt ccgtttcatc ttgatgataa
    10981 cgccgccgct cgcgtaggta ttcgcgcctg gccgatcagc gtgacgggga ataaaccggc
    11041 ggaagggccg tttactgcgc gcggctatct acgagtcgat tatgattaag gaggcataat
    11101 gattcttcgg cgcgttttca tcgctatcgg ttgtgttttg ttaagcccgc tgagtcaggc
    11161 caactcatct ctgggcgaag tgaatattga actgcgcggt aacgtggtgg attttacctg
    11221 cgccgtggtt gcgggcgaca gtaacaagtc ggttaacctc ggcacctggc cgacaaaaca
    11281 gcttcacgtc gccggggacg ctacgcaacc ggtagccttt agcctaaaac ttgaaggctg
    11341 cccgccaggt tcggcgtcta taacgttttc cgggacgcca gcgcccggca cggcattact
    11401 ggcgcttgct gatacggcaa tggcgcaaaa actggcgatt gaaattcgcg atggcgatca
    11461 acgtcgattg ccacttgaac aggccagcaa ggccgtcgat attgacaaca acggcaatgc
    11521 taccctgaaa ttctatgcga actatatcgc cttagccgat ggcgtgcagc ccggtcttgc
    11581 taacgcggat gcgaccttcc tgatcaatta caattagtgt ccgttatttt ggctcccgaa
    11641 cgataattcg ccgggagtac atttacaata attcgtgtga tttggcgtaa tcgataagct
    11701 caacgataga gtgaaggcca agtttagaaa atatattggc cttatgcgcg ctgatagtct
    11761 tgttactcaa taaaagttgc tcggcaattt ctttgttaga cattccattg gccagatagc
    11821 gcagcacggt aacttcgcgg ttagaaagtg gcatatcatg gtgcccgcct ttggggggac
    11881 gggtattact gataaagtta agcgtctcag atggaaaaaa agaatagccg gataaaatta
    11941 tttttaccgc attataaata tcattgaggt ctttgcgttt acttacaaat ccgtttgcgc
    12001 ccgctcttat tgctcttccg gcataaaaag cctctgattt cgacgataaa aaaagtatcc
    12061 gggtatgttc ctggatagat ttgattcgtt taagtaaggt aaagccgtcg gtgcccggta
    12121 attcaatatc cagaatgaca agatcaacag gataagtgcg cagatactct atcgctgttc
    12181 ggctatcatc cgttttcagg acaacctgaa tattgctatt tttaccgagt aaaacttcga
    12241 tcgacattct tacaataggg tgttcgtcca taatgataac agatgcaggt ttcattgttg
    12301 tatgcctcag actgttatgc gtccttcgtt ttagaataag cgtcagacac cttaaagatt
    12361 gtgaaatagc cagatctaca caccacacgg tggagcaata ataaagaatg agacctccct
    12421 gttgactggc tattttgcgt aagagtaata aatatgtgga atatccattt cgcaccaaca
    12481 aaaaagaaat ttctgattaa gtaaaaacaa tatggattat acctggtctg atttctcgga
    12541 aaagtcttgc gaaatgcgaa ttatggatag cgggtaggat gttctgtgac gttatagaaa
    12601 atttgttcgt ggtggagcta ttttctttag agttgacatt aagtagttta aactgttgtt
    12661 tttaagtata aaaataatat gaaagactaa ttgtttagta tttgttatgt aataacagaa
    12721 agatgttgac gctggagacc gcaaaaaaca aggaggaaca ggggacgatg taagaaaaaa
    12781 ttttttgtcg cttaccagga cgagttgtaa atattaattt tatgtgaaat atttacattt
    12841 aatggcagtg aaaataagta atttcttaaa aaatcttatt caccaaaacg ttacttcgtt
    12901 aaaaaatgtc gtggaaagta acgtttagct gctggatcag ccgaagaaag ctttgcctgt
    12961 ggggaaggtt aaggagggtg ataagttgtt taagccggta aaccacacga tgataaggta
    13021 cgctttgctg acgtgctatt tcttttaaag aggcaccttg cgctaaagtt tcaatcatca
    13081 accagtcagt acggctaaag ctttccgata agcgaggttc ggcggctgat aacaaggctt
    13141 cgcgtacaga ggccagattt tgtcgtcgcg acaggacaaa aaaacgccca gccatacgga
    13201 taaactgagc tatagcgggg gttttatctg ataccagcag gtaaatctgg atatcgcttt
    13261 gttgccaact gagcgcgtgt agctggttaa gcgcctcaat acaggagaca ggtagcgtct
    13321 ccatatctac aatcagttgt ctgagcgacc ccttttcaat ccacaaagaa atgtcatcta
    13381 atgagcggaa tgctgcggta cgttttccgg aaaataagta gtgactcaat gaatagccga
    13441 ggtagttatc agttgtaatt attgcctgag aaatgatacc aaccggcaag gcataattta
    13501 gctgttggtt cagtaactca aggcgatcaa atatctgcgg cgttggagag tgataacggc
    13561 aggcgcagtc tttggcattt cttaaacggc ggtgtctttc cctgcatggt acgctgcgca
    13621 tcctgctttt tccattgctc taatatatat ctggtaatat ggctggccat aaataacctt
    13681 gtcccatcgt tgcaccagcg taaaaagcaa tgcctcgttg ctctgatgtt tcaatgcctt
    13741 ccatcagcat taactgctga aaaaaaactt cgctatcatg ttctgacgga agttgcgtca
    13801 ggacctcata gccgattaat tgcgcagttg agagatgaac gattggctca gattttaaca
    13861 atccgctgtt gagatatgaa tggcgtgttg gcgaagacgc caggtgtggg ggatttatcc
    13921 tttcctttaa taaagtaccc tgtgccacca aacactcctt caggcattta tgatgcagcc
    13981 atatattttt gacccctgaa tctatcagga tattatgggt atcattgtgg cagcgttaaa
    14041 aaaatgcctg taggtatcgt tacttaatta ttggtgagat atttcgtaag ctttgtaaaa
    14101 agttaagtga gtttacttac tgagtaagaa atgaaggtta actctaatat attttaaaaa
    14161 ctgctgctcc gttttaacat gtaattttcg cataatgctc cggcggagtg actttgtctg
    14221 ctcttcagaa agtgaaagta aagcggccgt ttcgcttaaa tgataaccgc tggcgatcag
    14281 ttttaataag tgacgttctg ttactgaaaa atggcgagtc gtgcagtagt ggcagatgcc
    14341 agaagggacg ctatgtcgaa gcgctcgctt atgtaagatc aatatcattt tccgggtaat
    14401 ttcttcaaca tcatcttccc gataaatatg cggcagcata tacagacatg gtctgaacat
    14461 gagcttttct ttatcgcatt tattacaaat aattacccgt agctgatgtt gagtatgcat
    14521 aggtatctgg taacagcctg cgctgaacca atcatcatcc agggtcagga aagcgatatc
    14581 ggcattatct atctcttctg gcggcagaaa gtcaattttc tgctgccatt gattcgccag
    14641 acgcgtcatg atgattttca aaccatgctc aaagtgactg ttttgttcct taatagcgat
    14701 actcagcata aaaaatatcc tacacggcag gtgagtcatg gtgaaatatt aaagaaactg
    14761 attgattatc taaatactgg cggctttaat tcccacttta tgcgtgctga gatgtgtcca
    14821 ggcgatttcc tggaacctgg cattgcgcca gaaaagacga tattcgtaca cttagtcagc
    14881 aaccagaaca aaagccattg actcaggagt gcctgaccgt ataattctcg cgtttcgtct
    14941 acatgaagtc ttcacttcac aaggcgccct tagctcagtt ggatagagca acggccttct
    15001 aagccgtggg tcgcaggttc gaatcctgca gggcgcgcca cttataaatc aacgcgttac
    15061 gcttctttat ttcctcctta ttttccatat gggacatatt tgggacatca tcaccaaaaa
    15121 tgtcgtctat tttcctcgcg tgttccgtta aatgattagg cgcaaggtga gcatatctgt
    15181 gaatcgccac ggataacctg gacacttctg agtcgttgat gatataggtt ttcatattca
    15241 gccggtggca tctgctcgct cgaaccatgc cgacgtctac tgttataaaa catttctatg
    15301 taattaaaaa tatcgcttct ggcttcgtct ctcgttccgt agatcttttt ctttatccgt
    15361 tcacgcttca gtagctggaa aaagctttct gcaaccgcat tttcatgaca gttgccacga
    15421 cggctcatac tgccctccag tccgtgcgat ttcaggatcg actgccattc atagcgggtg
    15481 attatgtcgc cacacggcca tcaggagcgc attcaggact ccatcttttg tcattcatgg
    15541 ttgcagtgac caattgagtc tactgcggct ttttttaata tgtcccgttc gtcagtaacc
    15601 cgcttcaact ctttcgggag tcggcggatt ccggtctgat catctgactg ctctttattt
    15661 ctttattggt ggaggagttc gacccgtact tctttatcct ggcgtaaaga ctgtgggtag
    15721 taatatcgag atgtgttgcg acgctggaaa cagaatggcc gcgctcaaca acctgtctta
    15781 ccgcttcaat tttaaactct tcgggataac gtttaccgct cataggcacc tctctttaag
    15841 tcatcttaaa tggatctgag gtgtctgtta aacctgtggt gattcacatt gaccgcagat
    15901 tatcagattc ctttacccgg tagtgaaacc agtaggggtc agtttatccg cactaaaaga
    15961 cggtgttcct gcatctgtgg tggagttgaa ccggatgggc tttgggcaca tgcgtatcct
    16021 gcgtgtattg gtcagttgcc ggagtctgga ttaatgcact atggctccgt tgggttcttt
    16081 tttgggactg atggcgcatt gcgacttctt gctaagaaac ctgatggggc atttgtgaca
    16141 tacgatatgt aggaatcccc gccgcccgtt acccattggt ggcggggaac attaattata
    16201 catgaatgtt atttaattat ttccgtaata ttctcatttg tcctcgcccc tgttctaacg
    16261 tcccatgtcc cagatgtaat tgattctaat tcatttgaat ctatgccgtt aatcgcccgt
    16321 cctgaaagcc atcttccgtc tatttgaaat gtcttcttgt cgacatctgc atttataact
    16381 tttccatcct ttgtttttaa gctaatgaac atcgctgtat tctcatcaag agaatcagca
    16441 ggattcttat taaactcaaa tattacaaag gttttaatgc ccatttgctg tttatatatc
    16501 cataatgatt ttatataaac gttgttacat atttttgcgt taatattaag aggtttgaga
    16561 ttaaaggctc gcgaatagtc gaaaaatcct ggagcagtta tttttacatc aatcccgtag
    16621 tatctagaca ttgcttcact gttaaacgta tcaagacttg ggcctgcatg cagtaccggt
    16681 ggaaagtaat aatcaggaat tatcgcttga tcttgtttgt tatctttcgc cctgtctatt
    16741 atttcttccc taatctccgt ttgtttgctt attgatttaa ttgatgagta atagagaatg
    16801 tatgatggaa tgaaatataa aaaagccatt gcatatgtag taatagataa ataaatggaa
    16861 gctttgttaa atttcgtaaa tgcagaatga gcaacaaagg aaatcgaaag aatcataaag
    16921 cagagtgctc cattgagagc cctgctgggc attgcaggag atgcaaggaa cgcaacattt
    16981 gcagcaattg cacccagtat gaataaaaag cttccaaaca taagtttgct gctactattc
    17041 cttgataaca ctacagagat tagtagtatt ataaatgcaa tatagacctg ccaatatgcc
    17101 cccattgctg atggcagcct ttctgaaaag tgctcaagaa ccctccatgc aagtggttgg
    17161 ttgtaccagt cttgtattgt agacgcacgg gataggtttc ccggagccag caggagaacc
    17221 cctgcgccta ttgcagatcc gaatacgcca atcagtagat atttatttct attcattata
    17281 aaaaaatatg ctacagaaat taatacaact acaagagatg tattttcatt tgagcaacct
    17341 gcaaatatcg atgatatggc atatacaaag agtattaaat tggatttttt ggcattgctt
    17401 aaatatatag aaattagtat ataaatggca atgaacatgt tggtccataa gtaatttgct
    17461 agcccaacaa gccagaagtt agtttgaccg agagctggat ttgcaatgaa gtataagaaa
    17521 aataagaaaa tcatcacata tggggacggt gacgactttg ttaatgtcgc tgggatcatt
    17581 gtccagcaca acaccattaa tgttagcgct gctgagttta ttgcattgta aatatgcggg
    17641 gagaaaaact ttaatagaga tgtgctgagc gtatctgaca caacccttcc gctccatccc
    17701 aaatagtgca tttttacgct agaaagcgaa agctctctta gggcataagt atagtcatca
    17761 gagttcattg gtgtaataaa tcctattgaa tacaccaatg agaaaactat aaggatagca
    17821 attaccattt ttaatctatt gttaaccatt tttcttccca ttcttaatta tgtatttagg
    17881 ccttttttta gtttctatgt aaatcctgcc aatatattcc ccaagaatac ctattcctat
    17941 caattgaacg ccacccagga aaagtacaga aacaagaaga gacgggtagc caggaacatt
    18001 atttccaaat attaatttat ctataatcat ccatgtaccg taaaggaacg acatacctgc
    18061 aataaacaat ccaatgtacg tccatatgcg gagcggaaat gttgagaaag aagttattcc
    18121 ttccagcgcc agattccata atttccagcc attgaatttt gaatcgccgg caacacgctc
    18181 agcgcgggcg tatccaacta catcagtctt gccgcccacc catgacagaa cgcctttcat
    18241 aaacagatta cgttctggca tctgtttaat attttcgaca acatcacggc tcattaaccg
    18301 gaaatcaccg acgttctctt caattttcgg attgctgatt ttattatgca gcttataaaa
    18361 ccattcagct gtcttacgct tcatgcgccc gtcagttgag cggtctgagc gcttagccag
    18421 caccatatcc gcgccagcct gccacttctc aatgagatgg gggataactt ctatcggatc
    18481 ctgtaaatcg acatcaatag gaatgaccgc atccccggtt gcatggtcga gacccgcgaa
    18541 aagagcaggt tctttaccga agtttcgcgt aaacgaaagc ggaataacga gcggatcaga
    18601 tgcagctatt ttgttaatta ttgattcagt cgcatctttg cttccgtcgt tgatgaaaac
    18661 aatctcaact tcatacggtt ttaactcttc aaactcgcga accgttttat agaaaatagg
    18721 tatcgtggct tcttcattga agaccggaac gactaatgag attttcattt cgcatcccta
    18781 aagacaatga actttgaata aatgaatccg catatcaggc tgatagctga aaaggtgaca
    18841 agagtaagga gtggcggcag ggaacatttg tcagccatcc agccaacaac ggcgctcagt
    18901 gttcccataa atcccacgta catcatgtag cgaagcgtgg tggtgctggc gttaaaggtg
    18961 aagcgcgcat tggcatagaa gctgaacgat acggcgataa caaaaccgga aaagttcgcc
    19021 agcgcctgat gcgtatgcat cccatacaca caaaaagcaa atacgcccca atgaataagc
    19081 gtgttaagaa caccgatcga tgtgtactta gcgaataact tcaacattat gaaaatcagc
    19141 ggattcggaa aggtctggag tatagtacta caaattgctt ttttcgatat aaacgatcaa
    19201 taatgttata tttgatagct tgaacttatt gttgtcttat taattgatcg ttgttaccga
    19261 tcaattggag ctgctgattg ctgagtgggt tgggacaaaa acgggacaca caaagctttg
    19321 catgtttttc gaagatgggg cgagtgagcg ccgtggtaat gggataactt gttgttagct
    19381 caggtagttc caggaacatc taagccgtgg gtcgcaggtt cgaatcctgc agggcgcgcc
    19441 atttaacctc tcaaaattat gttaatccgt aagcttctgc gggggcgacg ttgtgccatc
    19501 cgcagtacgt gacgctaata tgcaaataac taattgcgtt taatctgttt atggtgctct
    19561 tcagcctgga tctcgtggga gaaagaatgg gcattattca tcgattgatg gatgaccatt
    19621 gctttttcat agtcgtccat ttcagaaaag ggtgtcgcat tttccacagt agtcggggcg
    19681 ctgggtttct gtgtctgagc catttgctga tgcgcgaagg cgtcaccgtt attcatcatc
    19741 tcatgtgctg tagcggataa ttggcgggat tccattttct ctgcggtgtg tacgccagct
    19801 gaaataaaaa cgacagctaa aagggatgta aacttattta tcttatttct ccggtgtggg
    19861 ttaataagag aaataataaa acagttgttg ggtttggcgc gtgacgggat aatgacgatt
    19921 atatcagatt attttgctgg ctagtgatag cgcctttcac tatcgctaca gttcaacgga
    19981 ggtgtttggg taatgtcaaa ataaaacgag tagcgcgtat cggaggtgac agaaactttt
    20041 ccctgatgcg caatgacgat ggattttaca attgccaggc ctataccgcg gccttcccct
    20101 ttacgctggc gggagggagc aacgcgataa aaacgatcga aaaggcgcgg gttctgaggt
    20161 gatgagccgt attgccacgc cgatgattgg cggcatgatt accgcgccgc tgctgtcgct
    20221 gttcatcatt ccggcagcct acaagctgat gtggctgcgc aggcatcgtc gccttgcggc
    20281 ataatgtgtg tcgcccgcct gcggcgtcaa actgtaggcg ggttcagtat acgtttatcg
    20341 tccaagcgcg ttgacccgtt tgcggtactc gcctggtgta caaccgaatt cacggacaaa
    20401 cgctttgtga aaagaagatt cgctcgcata acctaccgac tcggcaatca ccatcaccgg
    20461 cagcgcttca cgcgacaggg tctgggcggc gatttgcagg cgcagcgttg ttaacacggc
    20521 taagggcgtt gtagcggaca cgtcgcgaaa tagctgggcg aagctcgccc gcgacatgtg
    20581 tacccgttgc accagcgttt cgaccgtcca gggatgcgcc ggtgtttcca gcatgtgcag
    20641 gatcacgcgg cccagccggg gatgcagcaa taaattgagc acgcttttcg ccgtgccagc
    20701 ctgcgatagc cagtcgcgaa tggcgagggt aaacaacgtg gcgcactgct gactgtataa
    20761 gacatcagcg ccaggtaaat ggcgttctga ctcctgctgt aacagcgaaa tggcggcgtt
    20821 aagccagata ctggcggggc tatgcggcgg cggggcaaga cataacactt ccggcaacgc
    20881 ggtaaggaaa taacgtgacg tcgtgtgcag acgtagacta ccgcacacga tatgtgtcgg
    20941 tgcttcgcca gactggcgca aacggtgggc ggagttttgc ggcagaatca ccacctttcc
    21001 cggcgtaagc gtcatggcgt cgccggtagg catttccagt tgcgcttcgc cctgcgtaac
    21061 ggtatgccag cgaatcaccg atagctcgcc agcggcgtgc ggcaactgcc agtcgccgcc
    21121 taacgggcaa ttcttgtcga ttgagccctg aggggcgtta agcgtcaata gccgactaag
    21181 cgcatccata tagactccag aacagattta ttttcaaaaa taaggataac catttctgtc
    21241 tctgatcact atatttcgga ctcaatgtca tttctatcct tgtttttcct aaccgctaat
    21301 ttagacgata agacaaaaaa tgacgcgtta cggataaccc tgtctttttt gacgttattt
    21361 atacttgtcc tgacaaacag atggtgattt ggcggagaaa gaagatgaca cagtatcagg
    21421 cgctcattat tggttttggc aaggcaggaa aaacgttggc ggcaactctg gcgaagacgg
    21481 gatggcgcgt ggcgattatc gaacagtccg ccagtatgtt tggcggaacc tgtatcaaca
    21541 ttggctgtat tccaacgaaa acgctggtgt atgacgcgga acgtgagggc gatttttctg
    21601 tcgccatgca acgcaaagcg gcggtcgtaa attttttacg cgacaaaaat tttcataatc
    21661 ttgccgacct ggacaatgtc gatgtgattg agggaagggc ggagtttatt gataaccata
    21721 ccttacgggt atttcaggcg gacggcgagc gggtgttacg gggagaaaag atcttcatta
    21781 atactggcgc agagtcggtg atcccggcta ttacgggctt aacaacgacg gcaggggtgt
    21841 tcgatagcac cgggctacta agcctgagcc agcgtccggc gcggctgggg attttaggcg
    21901 gcggttatat tggccttgaa tttgcctcaa tgttcgctaa cttcggtacg aaggtcacta
    21961 tctttgaagc agcgccgcaa ttcttgcctc gtgaagatcg ggatatcgcg caggcaatta
    22021 cccacatttt acaggaaaag ggcgtcgagc taattttaaa cgccaacgta caggccgtat
    22081 cctcaacgga gggcgcggta caagttgaaa cgccggaagg cgcgcatctt gtggatgccc
    22141 tgctggtggc gtcggggcga aaaccggcga cggctggctt acagttgcag aacgccggtg
    22201 tggcggtgaa cgaacgcggc gggatcatcg tggatgatta cctgcgtacc acggcggaca
    22261 atatctgggc gatgggcgat gttaccggtg ggttgcagtt tacctatatt tcactggatg
    22321 attttcgtat tgtacgcgac gggttattgg gagatggcaa acgcagtacc cgcgatcgcc
    22381 agaacgtacc gtattccgtc tttatgacgc cgccgctctc tcgtgtcggg ctgacggaag
    22441 aacaagcgcg ggcaagcggc gcaacggtgc aggtggtgac attaccggtg gcggcgatcc
    22501 ctcgcgcccg tgttatgaat gatacccgtg gcgtactaaa agcggtagtg gacgtgaata
    22561 cgcagcgtat tgtaggggtg tcattgttat gcgtcgattc tcatgaaatg attaatatcg
    22621 ttaaaaccgt tatggatgca gatttacctt atacggtgtt acgcgaccag atatttaccc
    22681 atcctacaat gagtgagtct ttaaacgatc tcttctctct cattaagtaa aacataaata
    22741 atgtagccct gttaatcagg gctttttttt gcctgtcaga ccataaaaat acgacaggac
    22801 aaatatgctg gcgtctgaaa gaaaaggctt tagtcaggca taacgtatta taacaccatt
    22861 gaaataaccc acgactggaa atctcgatgt taaaagttac cacacttatt gcttcattat
    22921 tggctgcgcc gctggcgttt tccgcctccg cccagccgct aactgacgtt gaatatatca
    22981 gcgtttctgc ggtgtcagca acaccgtcaa tgcttgaaga cgctattgcc agactggcgc
    23041 aaagtaaaca ggcgtcgtca tggaaaatta cgtcaatgcg tattgataat acgggttacg
    23101 ccactgcgat attatataaa taaggagagc ctgagatgga taaatatctt cgtctgttaa
    23161 gtcaggggga tcggctggga ttaacattaa ttcgcctgag tatcgccatc gtttttatct
    23221 ggattggact actaaaattt gtgccctatg aggcagacag tattaccccg tttgtggcga
    23281 acagcccgtt tatgtctttt ttctatgaac atcctgaaga atatcgtcag catctgactc
    23341 atgagggcga actaaaaccg gaggaacgcg cctggcaaac ggccaataat acgtatgcgt
    23401 tttcggatgg tctgggcgtg gtggaattga ttatcgcggc gctggtactg gctaaccctg
    23461 ttagccgctg gttagggctg gcgggcggcg tgctggcatt cctgacgcca tttgtcacgc
    23521 tgtcgttttt aatcaccacg ccggaggcct gggttatgcc gctgggcgat gcgcattatg
    23581 gtttcccgta tttatcgggc gccgggcggc tggtattaaa agatacgtta atgctggcag
    23641 gtgcggtgat gatcatggcg gactccgccc gttcgttact tttacagcgc cagtagcgac
    23701 cctcttactc tctttatgcc gcgattcgtc gggtggcgct tgcgccatcc gacaatgtgt
    23761 tgatgaatga tggactaccc tgccagaagt tcctgttcca cctgttgaac ctgcgcctcc
    23821 agcgtattgc gaatttcggt tagcgcccgt tcctgctcgg agaaataggc ttccttattc
    23881 gcaacggaag aggcgagccg ccaggcattt tccgtttcca gctgcgttat ctctttcaac
    23941 agcgcgtcga tttgcgtgcg gagctggcgt attttatggc gcagatgttc caggttattt
    24001 agcctgtcgc ttgccatcat cggttccaga ccgctttgca gctgcgtcaa taacgcgcga
    24061 attgccgcca gatcggcatt ctgccgcgcc tgattaagct gtaccatcat ctggtgcgct
    24121 ttttctttca attcatcggc gaccacatcc gggtgacaca ggcggctggc ctgacgccac
    24181 aaacgtttta attcactgcg ttcgtctgcc gacaaacgtt gatcgcgggc gtagcggaat
    24241 tacgcttcct gctgctgctc ccggtactgg tgatagttct gttccgcatt ttcctgcgcc
    24301 tggcggaatg cgctgtcgtc ctgatgggaa aaatccgctt ccagctcgcg aatttccgcc
    24361 agcaacgcgg tgattaattc cgtctgctgc tggattcgct gacggatgcc caccgcttcg
    24421 cgcgaggcgg cattcaatcc tgtccactgc tgttttagcg ttgccagttg atccacggcc
    24481 tgggaaataa attgcaggca ggattgataa tccttttccc ggcgttttat ttcggcctct
    24541 tgcttacgct gcatactcac cgcgagctgt ttacgcaact ccagaatacg gctcatcaac
    24601 ggcccgagac gcagatgata gaggtcgttg aaatcgtcga ggatttgtac ccgcgcattt
    24661 cgtttgtcaa tcagatcgcg aagttgggct tcaagcgctt tcagctccag tttactggcg
    24721 gcaatagagg gatcttgcca cgtcgagagc gcccgttgag cctgtagcca ggcggcgatc
    24781 tcttgcatgg cgtcactgaa tcgacgagtt tcaatcgcct gggcaatcgc gctgattacg
    24841 gcatcctgcg gctcattttt caggtagatg agctgctgac ggataatctc ttcgtcctca
    24901 agttcgatgg cgcttttaat gatctctaaa cgtttgatga tcttattcat gacgttgacg
    24961 cctggcgtgg ctcaaaaatg gataacagat accaggtctg attcaccttt ttgaaaatac
    25021 tgaaaaaata ctaaatgtat tctgtagggt gtcgtacttt tcgtccagag ttattcacat
    25081 attttatacc cggcgtctgt cacccgtaac gttctatatc ggcgcgtact cttttctttt
    25141 tactccccgc gacatctttt tttacacgat aacgttaacg tccggagttg agccttgaca
    25201 aacgattgcg ccttgcggca gcgagagcga aatgttaaaa ggtgcccctc aataaaaacg
    25261 atacaggggt aggacgtgaa aaacgcgtca actgcatccg gcgccagcgt gtcggatgcc
    25321 gcgtcgaaga atgaaccgac gcttcaacgg gggttgcaaa accgccatat tcagctaatc
    25381 gccctgggtg gcgccattgg caccggactg tttctgggca tcggcccggc gattcaaatg
    25441 gcggggccgg ctgttttgtt gggctatggc gttgccggga ttatcgcttt tctcattatg
    25501 cgccagttgg gtgaaatggt cgtggaagag ccggtttccg gatcgtttgc ccacttcgcc
    25561 tggaaatatt gggggccgtt tgcgggcttt ttgtcgggct ggaactattg ggtcatgttt
    25621 gtgctggtcg ggatggcgga gctgaccgcg gcgggcatct atatgcagta ctggctgcct
    25681 gacgtaccaa catgggtatg ggcggcggtg ttttttatta tcattaatgc cgtgaatctg
    25741 gtgaacgttc gtctgtatgg cgaaacggaa ttctggttcg cgctcattaa agtgctggcg
    25801 attatcggca tgataggttt tggtctgtgg ctgctgttct ccggccacgg cggcgaacat
    25861 gccagcattg ataacctctg gcgttataac ggtttcttcg ctaccggttg gcatggtttg
    25921 cttctgtcgc tggcggtgat tatgttttct tttggcggac tggagctgat cggcattact
    25981 gcggcggaag cgcgcgatcc gcaaaaaagc atcccgaaag cggtgaatca ggtggtatac
    26041 cgtattttgc tgttctacat cggttcgctg gtggtgttgc tggcgctcta tccatgggta
    26101 gaggtgaaat ccaatagcag cccttttgtg atgatcttcc ataacctgga cagtaatgtg
    26161 gtggcttcgg cgctgaattt cgttatcctg gtcgcgtcgc tttcggtgta taacagcggc
    26221 gtttattcga atagccgaat gctgttcggc ctgtccgtac aaggcaacgc gccgaaattt
    26281 ttaactcgcg tcagccatcg cggcgtgccg gtgaactcgc tgatgctgtc cggagcgatt
    26341 acctcgctgg tggtgctgat caactatctg ttgccgcaaa aagcgtttag cctgttgatg
    26401 gcgctggttg tcgcgacgct attgctaaac tggataatga tctgtctcgc gcatttacgt
    26461 tttcgcgcgg cgatgcgtcg taaagggcgc gagacgcaat ttaaggcgct gttctatccc
    26521 gccggaaact atttgtgcat tgcgtttctg gcgctgattc tggtgttaat gtgtacgatg
    26581 gacgatatgc gattgtcggc gattttgctg ccggtatgga ttgtatttct gtttatcgcg
    26641 tttaccgttt tgcgccgtaa ggctcattaa cttttttgcc cgatcccatg ctcatgcgat
    26701 cgggcaatcc attaatggcg caatgtccct gacagcgcgc gaatatcgct gccggtcggc
    26761 gtctgatgaa tacgcaagcc gaactcttcc accacggcaa aaatatggtc gaaaatatcg
    26821 gcctgaatgc tctcatattc cagccacacg acggtattgg taaaggcgta gatctctatc
    26881 ggcaaaccat gatcgtcagg cgccagttgg cgtaccatca gcgtcatgtc tttacggatg
    26941 cgcggatggt ggcgtaaata ttcgttcaga taggcgcgaa atgtcccgat attggtcatt
    27001 cggcggtgat ttaaggctga ttccggcgca tccagttgtt tattccattc atcgatttcc
    27061 tgatgacggc tggtaaggta cggctttaac agttgcgcgg ttaacagccg ctgtttttca
    27121 tcatcatcca gaaaatggat actggtcgcg tcaatattaa tgctgcgttt aatccggcgt
    27181 ccgccggacg cagacatgcc gctccagttt ttgaacgagt cggaaaccag cgaccaggtg
    27241 ggaatggtgg tgatggtatt atcccagttg cgtactttta ccgtggttaa gccaatatca
    27301 atgaccgcgc catctgcgcc atattttggc atctccagcc agtcgcccag tttgagcata
    27361 tcgttggcgg aaagctgtat accagcaacc aggccaagaa tcgggtcttt aaagaccagc
    27421 attaataccg cggccatcgc gcccagcccg ctgattaaaa ttgctggtga ctggccaatc
    27481 agcagtgaga tcatcagaat gccgacgata attgcgccga tgagcttaat gccctgaaat
    27541 attcctttta gcggtaactg agaggcggcg ggccattttt gcgatagatt gaaaatcacg
    27601 tccagcagcg aaaataacga cagcagggcg taggtcataa tccataactg cgcgcaggtc
    27661 gtcaggatat ccgcagcctc actgcctttt tgtagccaga gcgcggcttg aatattgaca
    27721 atgatgcctt gtagcgtaaa agccagacga tggaataatt tattctgggt aataatttgc
    27781 agccacaggc gggaactggc gctggcacgt ttttcaaaag cgcgcagtac tatccagtgc
    27841 aaaataatat gcacgacaac tgctgtcaga aaaataatac caaatatcac caccagcgac
    27901 gtggtgtgat tcatttcaat tcccgctaaa tcttctacct gggatatcaa ttcctgcata
    27961 atctctcctt tataaacagc agcctatgat gactgctgaa tggcatttat gcaaatcagg
    28021 acgcctgcgc ttcaggcata atcagcaaca gacgggtaaa agcgcctctg gggttatcca
    28081 tacgctatat tttatccagc gccctataaa cgtcgttatt ttacgcggtt ccctcttttt
    28141 gaacaggcgc cagtccgtca acaatgaatg aaaacttttt aaccagaatg tttaaaacga
    28201 ttgcaatatc tctgtcggat aatgattaga accgtcgtac ctatcaacaa taacattaag
    28261 gaacatcgga tgacccaaaa gcgtaccctg ctaaaatacg gcatactctc gctggcgctg
    28321 gccgcgccat tatctgcctg tgcgtttgac tctcttacgg tgattggcga tagccttagc
    28381 gataccggaa ataacggtcg ctggacctgg gatagtggtc aaaataagct ctacgacgaa
    28441 cagttggccg aacgatatgg gctggcatta agcccttcca gcaatggcgg ttctaattat
    28501 gccgctggcg gcgcgatgac ggccccggaa ttaaacccgc aggataatac cgcggatcag
    28561 gtacggcagt ggcttgccaa tacgggggga aaagccgacc acaacggttt gtatattcac
    28621 tgggtcggcg gaaacgatct ggcggcggcc atcgcgcgac ctgccatggc acagcaaata
    28681 gccggtaata gcgccactag cgcgg
//
LOCUS       DAGWFR010000036        28664 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.036, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000036 DAGWFR010000000
VERSION     DAGWFR010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 28664)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28664)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28664
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.036"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..320
                     /locus_tag="MOX77_001652"
     CDS             <1..320
                     /locus_tag="MOX77_001652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HCA3357211.1"
                     /translation="TAFGMAAAVLFPQYHLEAGTFAIAGMGALMAASVRAPLTGIVLV
                     LEMTDNYQLILPMIITCLGATLLAQFLGGKPLYSTILARTLAKQDAEQAAKNQNAPAG
                     ENT"
     gene            402..746
                     /gene="erpA"
                     /locus_tag="MOX77_001653"
     CDS             402..746
                     /gene="erpA"
                     /locus_tag="MOX77_001653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001295564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster insertion protein ErpA"
                     /protein_id="HCA3357212.1"
                     /translation="MSDDVALPLQFTDAAANKVKSLIADEDNPNLKLRVYITGGGCSG
                     FQYGFTFDDQVNEGDMTIEKQGVGLVVDPMSLQYLVGGSVDYTEGLEGSRFIVTNPNA
                     KSTCGCGSSFSI"
     gene            complement(847..1470)
                     /locus_tag="MOX77_001654"
     CDS             complement(847..1470)
                     /locus_tag="MOX77_001654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRIC cation channel family protein"
                     /protein_id="HCA3357213.1"
                     /translation="MLVYWLDIVGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGG
                     TIRDMALDNGPVFWVKDPTDLVVAMVTSMLTILLVRQPRRLPKWMLPVLDAVGLAVFV
                     GIGVNKAFLAETGPLVAVCMGVITGVGGGIIRDVLAREIPMILRTEIYATACIIGGIV
                     HATAFYTFSVPLESASMMGMVVTLFIRLAAIRWHLKLPTFALDENGR"
     gene            complement(1507..2307)
                     /gene="btuF"
                     /locus_tag="MOX77_001655"
     CDS             complement(1507..2307)
                     /gene="btuF"
                     /locus_tag="MOX77_001655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin B12 ABC transporter substrate-binding
                     protein BtuF"
                     /protein_id="HCA3357214.1"
                     /translation="MAKQMFRALGALLLTLPVWLYAAPRVITLSPANTELAFAAEITP
                     VGVSSYSDYPPEAQKIEQVSTWQGMNLERIVALKPDLVVAWRGGNAERQVNQLTSLGI
                     KVMWVDAVTIEQIADALRQLAAWSPQPEKAQQAAQTLLKEYAALKVEYAGKAKKRVFL
                     QFGMNPLFTSGKGSIQHQVLTTCGGENVFADSRVPWPQVSREQVLARHPQAIIVAGKA
                     GEILKIEQYWGNLLKIPVIPLNSDWFERASPRIILAAKQLCNALSQVN"
     gene            complement(2300..2998)
                     /gene="mtnN"
                     /locus_tag="MOX77_001656"
     CDS             complement(2300..2998)
                     /gene="mtnN"
                     /locus_tag="MOX77_001656"
                     /EC_number="3.2.2.16"
                     /EC_number="3.2.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-methylthioadenosine/S-adenosylhomocysteine
                     nucleosidase"
                     /protein_id="HCA3357215.1"
                     /translation="MKIGIIGAMEEEVTLLRDKIDNRQTITLGGCEIYTGQLNGTEVA
                     LLKSGIGKVAAALGATLLLEHCKPDVIINTGSAGGLASTLKVGDIVVSDEARYHDADV
                     TAFGYEYGQLPGCPAGFKADDKLIAAAESCIRELNLNAVRGLIVSGDAFINGSVGLAK
                     IRHNFPDAVAVEMEATAIAHVCHNFNVPFVVVRAISDVADQQSHLSFDEFLAVAAKQS
                     TLMVETLVQKLAHG"
     gene            3083..4600
                     /gene="dgt"
                     /locus_tag="MOX77_001657"
     CDS             3083..4600
                     /gene="dgt"
                     /locus_tag="MOX77_001657"
                     /EC_number="3.1.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dGTPase"
                     /protein_id="HCA3357216.1"
                     /translation="MASIDFRNKINWHRRYRSPQGVKTEHEILRIFESDRGRIINSPA
                     IRRLQQKTQVFPLERNAAVRTRLTHSMEVQQVGRYIAKEILSRLKEQNRLEEYGLDAL
                     TGPFESIVEMACLMHDIGNPPFGHFGEAAINDWFRQRLHPEDAESQPLTHDRCVVSSL
                     RLQEGEENLNDIRRKVRQDICHFEGNAQGIRLVHTLMRMNLTWAQVGGILKYTRPAWW
                     RGPVPDSHRYLMKKPGYYLSEEKYIARLRKELQLAPYSRFPLTWIMEAADDISYCVAD
                     LEDAVEKRIFSVEQLYHHLYHAWGHHEKDSLFELVVGNAWEKSRANTLSRSTEDQFFM
                     YLRVNTLNKLVPYAAQRFIDNLPQIFAGTFNQALLEDASGFSRLLELYKNVAVEHVFS
                     HPDVEQLELQGYRVISGLLDIYQPLLSLSLNDFRELVEKERLKRFPIESRLFQKLSTR
                     HRLAYVEVVSKLPTDSAEYPVLEYYYRCRLIQDYISGMTDLYAWDEYRRLMAVEQ"
     gene            4730..6157
                     /gene="degP"
                     /locus_tag="MOX77_001658"
     CDS             4730..6157
                     /gene="degP"
                     /locus_tag="MOX77_001658"
                     /EC_number="3.4.21.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine endoprotease DegP"
                     /protein_id="HCA3357217.1"
                     /translation="MKKTTLAMSALALSLGLALSPLSATAAETSSSAMTAQQMPSLAP
                     MLEKVMPSVVSINVEGSTTVNTPRMPRNFQQFFGDDSPFCQDGSPFQNSPFCQGGGNG
                     GNGGQQQKFMALGSGVIIDAAKGYVVTNNHVVDNASVIKVQLSDGRKFDAKVVGKDPR
                     SDIALIQIQNPKNLTAIKLADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLN
                     VENYENFIQTDAAINRGNSGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKN
                     LTSQMVEYGQVKRGELGIMGTELSSELAKAMKVDAQRGAFVSQVMPNSSAAKAGIKAG
                     DVITSLNGKPISNFAALRAQVGTMPVGSKISLGLLREGKAITVNLELQQSSQSQVDSS
                     TIFSGIEGAEMSNKGQDKGVVVSSVKANSPAAQIGLKKGDVIIGANQQPVKNIAELRK
                     ILDSKPSVLALNIQRGDSSIYLLMQ"
     gene            6310..7467
                     /gene="cdaR"
                     /locus_tag="MOX77_001659"
     CDS             6310..7467
                     /gene="cdaR"
                     /locus_tag="MOX77_001659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator CdaR"
                     /protein_id="HCA3357218.1"
                     /translation="MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERI
                     GELHEGALLVLSQGRVVDIDNAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPEHLR
                     KYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALVEWAQRLGIDL
                     NQPRVAAVVEVDSGQLGVDSAMAELQQLQNALTTPERNNLIAIVSLTEMVVLKPALNS
                     FGRWDAEDHRKRVEQLISRMKENGQLRFRVALGNYFTGPGSIARSYRTARTTMMVGKQ
                     RMPESRSYFYQDLMLPVLLDSLRGGWQANELARPLVKLKAMDNNGLLRRTLTAWFRHN
                     VQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEQR"
     gene            complement(7556..7942)
                     /locus_tag="MOX77_001660"
     CDS             complement(7556..7942)
                     /locus_tag="MOX77_001660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000272186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3461 family protein"
                     /protein_id="HCA3357219.1"
                     /translation="MYDNLKSLGITNPEEIDRYSLRQEANNDILKIYFQKDRGEFFAK
                     SVKFKYPRQRKTVVADGIGQGYKEVQEISPNLRYVIDELDQICQRDRSELDLKRKILD
                     DLRHLESVVANKISEIEADLDKLTRK"
     gene            8189..9491
                     /locus_tag="MOX77_001661"
                     /pseudo
     CDS             8189..9491
                     /locus_tag="MOX77_001661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459217.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MHS family MFS transporter"
     gene            complement(9528..10352)
                     /gene="dapD"
                     /locus_tag="MOX77_001662"
     CDS             complement(9528..10352)
                     /gene="dapD"
                     /locus_tag="MOX77_001662"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HCA3357220.1"
                     /translation="MQQLQNVIETAFERRADITPANVDTVTREAVKQVISLLDSGALR
                     VAEKIDGQWVTHQWLKKAVLLSFRINDNQVIDGAESRYFDKAPMKFADYDEARFQKEG
                     FRVVPPAAVRQGAFIARNTVLMPSYVNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSG
                     GVGIGGVLEPLQANPTIIEDNCFIGARSEVVEGVIVEEGSVISMGVYLGQSTKIYDRE
                     TGEVHYGRVPAGSVVVSGNLPSKDGKYSLYCAVIVKKVDAKTRGKVGINELLRTID"
     gene            complement(10382..13054)
                     /gene="glnD"
                     /locus_tag="MOX77_001663"
     CDS             complement(10382..13054)
                     /gene="glnD"
                     /locus_tag="MOX77_001663"
                     /EC_number="2.7.7.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     uridylyltransferase/uridylyl-removing protein GlnD"
                     /protein_id="HCA3357221.1"
                     /translation="MNTLPEQHANTALPTLPDQPQNPGVWPRAELTVAGIKARIDIFQ
                     HWLGEAFDSGICAEQLIEARTEFIDQLLQRLWIEAGFGQIADLALVAVGGYGRGELHP
                     LSDIDLLILSRKKLPDEQAQKVGELLTLLWDVKLDVGHSVRTLEECLLEGLSDLTVAT
                     NLIETRLLIGDVALFLALQKHIFSEGFWPSDKFYAAKVEEQNQRHQRYHGTSYNLEPD
                     IKSSPGGLRDIHTLQWVARRHFGATSLDEMVGFGFLTPAECAELNECLHILWRIRFAL
                     HLVVSRYDNRLLFDRQLSVAQRLNYSGEGNDPVERMMKDYFRVTRRVSELNQMLLQLF
                     DEAILALPADEKPRPVDDEFQLRGTLIDLRDDTLFIREPQAILRMFYMMVRNSAITGI
                     YSTTLRHLRHARRHLSQPLCYIPEARTLFLSMLRHPGAVSRGLLPMHRHSVLWAYMPQ
                     WSHIVGQMQFDLFHAYTVDEHTIRVMLKLESFAKEETRQRHPLCVDLWPRLPHPELIL
                     IAALFHDIAKGRGGDHSVLGAQDVLTFAELHGLNSRETQLVAWLVRQHLLMSVTAQRR
                     DIQDPEVIKQFAEEVQTETRLRFLVCLTVADICATNETLWNSWKQSLLRELYFATEKQ
                     LRRGMQNTPDMRERVRHHQLQALALLRMDNIDEAALHKIWTRCRANYFVRHSPNQLAW
                     HARHLLQHDLSQPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQI
                     FTTRDGMAMDTFIVLEPDGSPLAADRHDVIRTGLEQTITQHSWQPPQPRRQPAKLRHF
                     TVETEVNFLPTHTDRKSFMELIALDQPGLLARVGQIFADLGISLHGARITTIGERVED
                     LFIIATADRRALNNVLQLEVQQRLTAALNPNDKG"
     gene            complement(13167..13961)
                     /gene="map"
                     /locus_tag="MOX77_001664"
     CDS             complement(13167..13961)
                     /gene="map"
                     /locus_tag="MOX77_001664"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HCA3357222.1"
                     /translation="MAISIKTSEDIEKMRVAGRLAAEVLEMIEPYIKPGVTTGELDRI
                     CNDYIVNEQHAISACLGYHGYPKSVCISINEVVCHGIPDDAKHLKDGDIVNIDVTVIK
                     DEFHGDTSKMFIVGKPTILGERLCRVTQESLYLGIKMVKPGIRLRTIGAAIQKYAEGE
                     GFSVVREYCGHGIGRGFHEEPQVLHYDADDGGVVLQPGMTFTIEPMLNAGDYRIRTMK
                     DGWTVKTKDRSLSAQYEHTIVVTENGCEILTLRKDDTIPAIITHDE"
     gene            14411..15136
                     /gene="rpsB"
                     /locus_tag="MOX77_001665"
     CDS             14411..15136
                     /gene="rpsB"
                     /locus_tag="MOX77_001665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HCA3357223.1"
                     /translation="MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLE
                     KTVPMFNEALAELNKISARKGKILFVGTKRAASEAVKEAANSCDQFFVNHRWLGGMLT
                     NWKTVRQSIKRLKDLETQSQDGTFEKLTKKEALMRTRELEKLENSLGGIKDMGGLPDA
                     LFVIDADHEHIAIKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVSLYLGAVA
                     ATVREGRSQDLASQAEESFVEAE"
     gene            15394..16245
                     /gene="tsf"
                     /locus_tag="MOX77_001666"
     CDS             15394..16245
                     /gene="tsf"
                     /locus_tag="MOX77_001666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Ts"
                     /protein_id="HCA3357224.1"
                     /translation="MAEITASLVKELRERTGAGMMDCKKALTEANGDIELAIENMRKS
                     GAIKAAKKAGNVAADGVIKTKIDGNVAFILEVNCQTDFVAKDAGFQAFADKVLDAAVA
                     GKITDVEVLKAQFEEERVALVAKIGENINIRRVASLEGDVLGSYQHGARIGVLVAAKG
                     ADEELVKQLAMHVAASKPEFVKPEDVSADVVEKEYQVQLDIAMQSGKPKEIAEKMVEG
                     RMKKFTGEVSLTGQPFVMEPSKSVGQLLKEHNADVTGFIRFEVGEGIEKVETDFAAEV
                     AAMSKQS"
     gene            16390..17115
                     /gene="pyrH"
                     /locus_tag="MOX77_001667"
     CDS             16390..17115
                     /gene="pyrH"
                     /locus_tag="MOX77_001667"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000224576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HCA3357225.1"
                     /translation="MATNAKPVYKRILLKLSGEALQGTEGFGIDASILDRMAQEIKEL
                     VELGIQVGVVIGGGNLFRGAGLAKAGMNRVVGDHMGMLATVMNGLAMRDALHRAYVNA
                     RLMSAIPLNGVCDNYSWAEAISLLRNNRVVILSAGTGNPFFTTDSAACLRGIEIEADV
                     VLKATKVDGVFTADPAKDPSATMYDQLTYSEVLDKELKVMDLAAFTLARDHKLPIRVF
                     NMNKPGALRRVVMGEKEGTLITE"
     gene            17262..17819
                     /gene="frr"
                     /locus_tag="MOX77_001668"
     CDS             17262..17819
                     /gene="frr"
                     /locus_tag="MOX77_001668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000622421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HCA3357226.1"
                     /translation="MISDIRKDAEVRMEKCVEAFKTQISKVRTGRASPSLLDGIVVEY
                     YGTPTPLRQLASVTVEDSRTLKINVFDRSMGPAVEKAIMASDLGLNPSSAGTDIRVPL
                     PPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKAISEDDDRRSQEEV
                     QKMTDAAIKKVDAALADKEAELMQF"
     gene            17961..19157
                     /gene="ispC"
                     /locus_tag="MOX77_001669"
     CDS             17961..19157
                     /gene="ispC"
                     /locus_tag="MOX77_001669"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HCA3357227.1"
                     /translation="MKQLTILGSTGSIGCSTLDVVHHNPDSFRVIALVAGKNVARMAE
                     QCLEFSPRYAVMDDTSSAEQLKIMLQQHGSRTEVLSGQQAACEMAALDEVGHVMAAIV
                     GAAGLLPTLAAIRAGKTILLANKESLVTCGRLFMDEVKRSNARLLPVDSEHNAIFQSL
                     PQSIQHNLGYADLEQNGVTSILLTGSGGPFRETPMCDLAAMTPDQACRHPNWSMGRKI
                     SVDSATMMNKGLEYIEARWLFNASARQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDM
                     RTPIAHTMAWPNRVTSGAQPLDFCKLSALTFSAPDYQRYPCLKLAMEAFEQGQAATTA
                     LNAANEITVAAFLAQQIRFTDIAGLNLAVLERMDLHEPASVDDVLQVDAIAREVARKQ
                     VIRLSR"
     gene            19470..20228
                     /gene="ispU"
                     /locus_tag="MOX77_001670"
                     /gene_synonym="uppS"
     CDS             19470..20228
                     /gene="ispU"
                     /locus_tag="MOX77_001670"
                     /gene_synonym="uppS"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2E,6E)-farnesyl-diphosphate-specific
                     ditrans,polycis-undecaprenyl-diphosphate synthase"
                     /protein_id="HCA3357228.1"
                     /translation="MLSATQPVSENLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKA
                     GAKSVRRAVSFAANNGIDALTLYAFSSENWNRPAQEVSALMELFVWALDSEVKSLHRH
                     NVRLRIIGDISRFNSRLQERIRKSEALTAHNTGLTLNIAANYGGRWDIVQGVRQLAEL
                     VQAGVLRPDQIDEERLGQQICMHELAPVDLVIRTGGEHRISNFLLWQIAYAELYFTDV
                     LWPDFDEQDFEGALHAFANRERRFGGTEPGDDKA"
     gene            20241..21098
                     /gene="cdsA"
                     /locus_tag="MOX77_001671"
     CDS             20241..21098
                     /gene="cdsA"
                     /locus_tag="MOX77_001671"
                     /EC_number="2.7.7.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HCA3357229.1"
                     /translation="MLKYRLISAFVLIPAVIAALFLLPPVGFAIITLVVCMLAAWEWG
                     QLSGFAARSQRVWLAVLCGLLLALMLFLLPEYHHNIRQPLVEMSLWASLGWWVVALLL
                     VLFYPGSAAIWRNSKTLRLIFGLLTIVPFFWGMLALRAWHYDENHYSGAIWLLYVMIL
                     VWGADSGAYMFGKLFGKHKLAPKVSPGKTWQGFIGGLATAAVISWGYGMWANLNVAPV
                     ILLICSVVAALASVLGDLTESMFKREAGIKDSGHLIPGHGGILDRIDSLTAAVPVFAC
                     LLLLVFRTL"
     gene            21110..22462
                     /gene="rseP"
                     /locus_tag="MOX77_001672"
     CDS             21110..22462
                     /gene="rseP"
                     /locus_tag="MOX77_001672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma E protease regulator RseP"
                     /protein_id="HCA3357230.1"
                     /translation="MLSILWNLAAFIIALGVLITVHEFGHFWVARRCGVRVERFSIGF
                     GKALWRRTDRYGTEYVIALIPLGGYVKMLDERAEPVAPELRRHAFNNKTVGQRAAIIA
                     AGPVANFIFAIFAYWLVFIIGVPGVRPVIGEITPNSIAAQAQIAPGTELKAVDGIETP
                     DWDAVRLQLVSKIGDQQTTVSVAPFGSDQRQDKTLDLRHWAFEPDKQDPVSSLGIRPR
                     GPQIEPVLSEVQANSAASKAGLQAGDRIVKVDGQPLTQWMKFVTFVRDNPGKPLALEI
                     ERQGSALSLTLTPDTKSVNGKAEGFAGVVPKIIPLPEEYKTIRQYGPFSAILEATDKT
                     WQLMKLTVNMLGKLITGDVKLNNLSGPISIAQGAGMSAEFGVIYYLMFLALISVNLGI
                     INLFPLPVLDGGHLLFLAIEKLKGGPVSERVQDFSYRIGSILLVLLMGLALFNDFSRL
                     "
     gene            22494..24905
                     /gene="bamA"
                     /locus_tag="MOX77_001673"
     CDS             22494..24905
                     /gene="bamA"
                     /locus_tag="MOX77_001673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HCA3357231.1"
                     /translation="MAMKKLLIASLLFSSATVYGAEGFVVKDIHFEGLQRVAVGAALL
                     SMPVRTGDTVNDEDISNTIRALFATGNFEDVRVLRDGNTLLVQVKERPTIASITFSGN
                     KSVKDDMLKQNLEASGVRVGESLDRTTLSDIEKGLEDFYYSVGKYSASVKAVVTPLPR
                     NRVDLKLVFQEGVSAKIQQINIVGNHAFSTEELISHFQLRDEVPWWNVVGDRKYQKQK
                     LAGDLETLRSYYLDRGYARFNIDSTQVSLTPDKKGIYITVNITEGDQYKLSGVQVSGN
                     LAGHSAEIEKLTKIEPGELYNGTKVTKMEDDIKKLLGRYGYAYPRVQSQPEINDADKT
                     VKLRVNVDAGNRFYVRKIRFEGNDTSKDSVLRREMRQMEGAWLGSDLVDQGKERLNRL
                     GFFETVDTDTQRVPGSPDQVDVVYKVKERNTGSFNFGIGYGTESGVSFQAGVQQDNWL
                     GTGYSVGINGTKNDYQTYSELSVTNPYFTVDGVSLGGRIFYNDFEADDADLSDYTNKS
                     YGTDVTLGFPINEYNTLRAGLGYVHNKLSNMQPQIAMDRYLESMGDPDASDFAADDFT
                     FNYGWTYNKLDRGYFPTDGSRVNLTGKVTIPGSDNEYYKVSLDTATYVPIDNDHKWVV
                     LGRTRWGYGDGLGGKEMPFYENFYAGGSSTVRGFQSNTIGPKAVYKNGAHTSWDDDDD
                     YEDCTQESGCKSDDAVGGNAMAVASLEFITPTPFISEKYANSVRTSFFWDMGTVWDTN
                     WDPSSAPSDVPDYSDPGNIRMSAGIALQWMSPLGPLVFSYAQPFKKYDGDKAEQFQFN
                     IGKTW"
     gene            25028..25513
                     /gene="skp"
                     /locus_tag="MOX77_001674"
                     /gene_synonym="hlpA"
                     /gene_synonym="ompH"
     CDS             25028..25513
                     /gene="skp"
                     /locus_tag="MOX77_001674"
                     /gene_synonym="hlpA"
                     /gene_synonym="ompH"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone Skp"
                     /protein_id="HCA3357232.1"
                     /translation="MKKWLLAAGLGLAMVTSAQAADKIAIVNMGNLFQQVAQKTGVSN
                     TLENEFKGRAAELQKMETDLQSKMQRLQSMKAGSDRTKLEKDVMSQRQTFAQKAQAFE
                     KDRARRSNEERNKLVTRIQTAVKKVANDQSIDLVVDANTVAYNSSDVKDITADVLKQV
                     K"
     gene            25517..26542
                     /gene="lpxD"
                     /locus_tag="MOX77_001675"
     CDS             25517..26542
                     /gene="lpxD"
                     /locus_tag="MOX77_001675"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HCA3357233.1"
                     /translation="MPSIRLADLAEQLDAELHGDGDIVITGVASMQSATTGHITFMVN
                     PKYREHLGLCQASAVVMTQDDLPFAKSAALVVKNPYLTYARMAQILDTTPQPAQNIAP
                     SAVIDATATLGSNVSVGANAVIESGVQLGDNVVIGAGCFVGKNSKIGAGSRLWANVTI
                     YHDIQIGENCLIQSSTVIGADGFGYANDRGNWVKIPQLGRVIIGDRVEIGACTTIDRG
                     ALDDTVIGNGVIIDNQCQIAHNVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGH
                     MEICDKVTVTGMGMVMRPITEPGVYSSGIPLQPNKVWRKTAALVMNIDDMSKRLKAIE
                     RKVNQQD"
     gene            26648..27103
                     /gene="fabZ"
                     /locus_tag="MOX77_001676"
     CDS             26648..27103
                     /gene="fabZ"
                     /locus_tag="MOX77_001676"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000210741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HCA3357234.1"
                     /translation="MTTNTHTLQIEEILELLPHRFPFLLVDRVLDFEEGRFLRAVKNV
                     SVNEPFFQGHFPGKPILPGVLILEAMAQATGILAFKSVGKLEPGELYYFAGIDEARFK
                     RPVVPGDQMIMEVTFEKTRRGLTRFKGVALVDGKVVCEATMMCARSREA"
     gene            27107..27895
                     /gene="lpxA"
                     /locus_tag="MOX77_001677"
     CDS             27107..27895
                     /gene="lpxA"
                     /locus_tag="MOX77_001677"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HCA3357235.1"
                     /translation="MIDKSVFIHPTAIVEDGAVIGANAHIGPFCIVGPQVEIGEGTVL
                     KSHVVVNGQTKIGRDNEIYQFASIGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHRGT
                     VQGGGLTKVGSDNLLMINAHVAHDCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVH
                     QFCIIGAHVMVGGCSGVAQDVPPYVIAQGNHATPFGVNIEGLKRRGFSREGLVAIRNA
                     YKLLYRSGKTLDEAKLEIAELAEKHPEVKAFTEFFERSTRGPIR"
     gene            27895..>28664
                     /gene="lpxB"
                     /locus_tag="MOX77_001678"
     CDS             27895..>28664
                     /gene="lpxB"
                     /locus_tag="MOX77_001678"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HCA3357236.1"
                     /translation="MAAQRPLTIALVAGETSGDILGAGLIRALKARVPNARFVGVAGP
                     RMQAEGCEAWYEMEELAVMGIVEVLGRLRRLLHIRADLTRRFTELKPDVFVGIDAPDF
                     NITLEGNLKKQGIKTIHYVSPSVWAWRQKRVFKIGRSTHMVLAFLPFEKAFYDKFNVP
                     CRFIGHTMADAMPLDPDKNAARDVLGIPHDAHCLALLPGSRGAEVEMLSADFLKTAQL
                     LRQRYPDLEVVVPLVNAKRREQFEKIKAEVAPDLAVHLL"
BASE COUNT         6632 a         7028 c         8083 g         6921 t
ORIGIN      
        1 gtacggcctt cggtatggcg gcggcagtgc ttttcccgca gtatcacctg gaggccggta
       61 cctttgcgat tgccgggatg ggggcgctga tggcggcgtc ggtgcgcgcc ccgttgacgg
      121 ggattgtgct ggtgctggag atgaccgata actatcagct cattttgcca atgattatca
      181 cctgtcttgg cgcgacacta ttagcccagt ttttgggcgg gaaaccgtta tactcaacca
      241 tcctggcgcg cactctggcg aagcaggatg cggaacaggc ggcgaaaaac cagaatgcgc
      301 ctgcgggcga gaatacttga acgaattacc agggtattag ataatgactg ccaatattgg
      361 gtgaaaattt atccaattac cgatgtcgtt tggagcaaaa tatgagtgat gacgtagcgc
      421 tgccgctgca gtttaccgac gcagcagcga ataaagtaaa aagtcttatc gctgacgaag
      481 ataacccgaa tctgaaactg cgcgtgtata tcaccggcgg tggttgcagc ggcttccagt
      541 atggttttac ctttgacgat caggttaacg aaggggatat gaccatcgaa aaacagggcg
      601 ttggcctggt ggttgacccg atgagtttgc agtatctggt gggtggttcg gtagattata
      661 ccgaaggtct ggaaggttcc cgcttcattg taaccaaccc gaatgcgaaa agtacctgcg
      721 ggtgtggctc ttccttcagc atttgattgc tgttcgttgt gccggatggc gacgcgagcg
      781 tcttatccgg cctacaggaa agatgttcca ggcccgataa gcgtagcgcc atcgggcaaa
      841 acaatatcaa cgtccgtttt catccagggc aaacgtcggc aatttcaaat gccagcgaat
      901 ggccgccagc cgaataaaca gcgtgacgac catgcccatc atgctagcgc tttccagcgg
      961 tactgaaaac gtataaaacg cggtggcgtg aacaatcccg ccgataatac aggccgtggc
     1021 atagatttcg gtgcgtagga tcatggggat ctcgcgtgcc agaacatcgc gaataatccc
     1081 gccgccgacg ccggtaatca cgcccataca gacggccact aatggccccg tttcagcgag
     1141 gaaggcttta ttcaccccaa tgccgacaaa caccgccagc ccgaccgcat ccagtaccgg
     1201 caacatccat ttcggcagac gtctcggctg gcgaaccagc aggatggtca gcatactggt
     1261 gaccatggcg acgaccaggt cggtaggatc tttaacccag aataccgggc cgttatccag
     1321 cgccatatcg cggattgtcc cgccgccgac ggcagtaacg acgccgagca ccaggacgcc
     1381 gaacgggtcc atacgtaatt tcccggccag caacacgcca gagatagcaa atacagccgt
     1441 gcctacaata tccagccaat agacgagcat tgtcgaatcc ccactaggag cctggtaaga
     1501 caggctctaa ttcacctgtg aaagcgcatt acagagttgt tttgcggcga ggataatacg
     1561 cgggcttgcg cgttcaaacc agtcgctgtt aagcggaata accggaattt ttaacaggtt
     1621 tccccagtat tgttcaattt tgagaatttc gcccgctttt ccggccacga taatggcctg
     1681 gggatgcctt gccagcacct gctcacggct gacttgcggc cacggcacgc ggctgtcagc
     1741 aaagacgttt tctccgccgc aggtcgtcaa aacctgatgt tgaatagacc ctttaccact
     1801 ggtaaacaga ggattcatgc caaactgaag aaagacgcgc tttttagctt taccggcata
     1861 ctcgactttg agcgcggcgt actcttttag caatgtctgc gctgcctgct gagccttttc
     1921 cggctgcggg ctccaggcgg ccagttggcg gagcgcgtcg gcgatctgtt cgatggttac
     1981 cgcgtccacc cacatgacct taatacctaa tgacgtcagt tggtttacct ggcgttccgc
     2041 attaccgccg cgccaggcga cgaccagatc cggcttcagc gccacaatgc gctccagatt
     2101 cattccctgc caggtagaga cctgttctat tttttgcgct tcgggcgggt agtcggaata
     2161 gctgctgacg ccaacgggcg taatctcggc ggcaaaagca agctccgtat tggcgggaga
     2221 gagcgtaatt acgcgcggcg cagcgtaaag ccacaccggg agcgtaagca gcagggcgcc
     2281 cagcgccctg aacatttgct tagccatgcg ccagtttctg taccagcgtt tcgaccatca
     2341 gagtcgactg tttcgccgcc accgcgagga attcgtcaaa gctgaggtgc gattgctgat
     2401 cggccacgtc agagatagcg cgtaccacca cgaacggcac gttgaagtta tggcagacgt
     2461 gggcgatagc ggtggcttcc atctctacgg cgaccgcgtc ggggaagtta tgccggattt
     2521 tcgccagccc gacggaaccg ttaataaacg cgtcgccgct aacaataagg ccgcgtaccg
     2581 cgttcagatt caactccctg atgcaggatt ccgcggcggc gatcagctta tcatcggcct
     2641 taaatccggc cggacagccc ggtaattgcc cgtattcata gccgaaagcg gtcacatcag
     2701 cgtcgtggta acgcgcttcg tcagagacga cgatatcgcc gaccttcagc gtggacgcca
     2761 gaccgcctgc ggaaccggta ttgatgatca cgtccggctt gcagtgctcc agaagcaacg
     2821 ttgcgcccag cgccgccgcg actttaccga taccggattt cagcaacgcc acttcggtgc
     2881 cgttcaactg gccagtgtaa atttcgcagc cgcccagcgt aatcgtctga cggttgtcaa
     2941 ttttgtcacg cagcagcgta acttcttctt ccattgcgcc aatgatgccg attttcatag
     3001 atttactcgc gataagtcag ttttgggggc atagtttatc atgcgcttat ggggaagcgc
     3061 atttctcagg cggggagagg atatggcatc gatcgatttc cgaaataaaa ttaactggca
     3121 tcgtcgttat cgttcaccgc agggcgtaaa gacggaacat gagatcctgc ggatttttga
     3181 aagcgatcgc gggcggatta tcaactctcc ggctatacgc cgtttgcagc aaaaaacgca
     3241 ggttttcccg ctggagcgca atgccgcggt gcgtactcgt ctgacgcatt cgatggaggt
     3301 gcagcaggtg gggcgttata tcgcgaaaga gattttaagc cgcctgaaag agcaaaaccg
     3361 actggaggag tacggtctgg atgcgctgac cggtcccttt gaaagtattg tggaaatggc
     3421 ctgtctgatg cacgacatcg gtaatccgcc gttcggtcat tttggcgagg cggcgatcaa
     3481 tgactggttt cgtcagcggc tgcatccgga agatgcggaa agccagccgc tcacgcatga
     3541 tcgctgtgtg gtttcctcgc tacggttaca ggaaggtgaa gaaaatctga acgatattcg
     3601 ccgcaaagta cgtcaggata tctgccattt tgaaggtaat gcacagggaa ttcgtctggt
     3661 acatacgctc atgcggatga atcttacctg ggcgcaggtt ggcggaattt taaaatatac
     3721 ccgtccggca tggtggcgag ggccggtgcc ggattcccat cgctatttaa tgaagaaacc
     3781 gggctattat ctttctgaag agaagtatat tgcgaggtta cgtaaagaac ttcagttagc
     3841 gccttacagt cgctttccat taacgtggat tatggaagcc gcagatgata tttcttattg
     3901 tgtcgccgat cttgaagacg cggtagagaa aagaatcttt agcgttgagc agctttatca
     3961 ccatttatat cacgcgtggg gccaccatga gaaggattcg ctgtttgagc tggtggtagg
     4021 aaatgcgtgg gaaaaatcac gcgccaatac attaagccgc agtaccgaag atcagttttt
     4081 tatgtattta cgggtaaata cattaaataa actggtgccc tatgccgctc agcgttttat
     4141 tgataatttg ccgcagattt ttgccggtac cttcaatcag gcgttactgg aagatgccag
     4201 cggttttagc cgcctgcttg aactctataa gaatgtggcg gttgaacatg tgtttagcca
     4261 tccggatgta gaacagcttg aactacaggg ataccgggtg atcagcgggt tattagatat
     4321 ctatcagccg ctattaagct tgtcgcttaa cgactttcgc gagctggtgg aaaaagaacg
     4381 gttgaaacgc ttccctatag aatcgcgctt atttcagaaa ctttctacgc gccatcgttt
     4441 ggcctacgtg gaagtcgtca gtaaattacc cacggattcg gcggagtacc cggtactgga
     4501 atattattat cgctgtcggt tgattcagga ttatatcagc gggatgactg acctttacgc
     4561 atgggatgaa tatcggcgtt tgatggcggt cgaacagtaa atggactttt gtaaagatgg
     4621 acaataaatt tttacttttt ccagaaactt tattccggaa cttcgcgtta taaaatgaat
     4681 ctgacgtaca cagcaatttt gcgttacctg ttaatcgaga ttgaaacaca tgaaaaaaac
     4741 cacattagca atgagtgcac tggctctgag tttaggtttg gcattgtcgc ctctgtctgc
     4801 cacggcggct gaaacgtcct cttcagcaat gactgcccag cagatgccaa gcctggcacc
     4861 gatgctcgaa aaagtgatgc catcggtggt cagtattaat gtagaaggta gcaccacggt
     4921 gaatacgccg cgtatgccgc gtaatttcca gcaattcttt ggcgatgact ccccgttctg
     4981 ccaggacggt tctccgttcc agaattctcc gttctgccag ggcggcggta acggcggcaa
     5041 cggcggtcaa caacagaaat tcatggcgct gggctccggc gtaattattg acgccgcgaa
     5101 gggctacgtc gtcaccaaca accacgtggt tgataacgcc agcgtgatta aagtacagct
     5161 tagcgatggg cgtaaattcg atgctaaagt ggtgggcaaa gatccgcgtt ctgatatcgc
     5221 gctgattcaa attcagaatc cgaagaacct gacggcgatt aagctggcgg actccgacgc
     5281 gctgcgcgtg ggggattata ccgtcgctat tggtaacccg tttggtctgg gcgaaacggt
     5341 gacgtcaggt atcgtttcgg cgctggggcg tagcggcctg aacgtagaaa attacgagaa
     5401 ctttattcag accgacgccg cgattaaccg cggtaactcc ggcggcgcgc tggtgaacct
     5461 gaacggtgag ctgatcggta ttaacaccgc gattctggcg ccggacggcg gcaacatcgg
     5521 tatcggcttc gctatcccca gtaacatggt gaaaaacctg acgtcgcaga tggtggaata
     5581 cggccaggtg aaacgcggcg aactggggat catggggact gagctgagct ctgagctggc
     5641 gaaagcgatg aaagtcgacg cccagcgtgg cgcgttcgtc agccaggtga tgccgaattc
     5701 gtccgcagcg aaagcgggta tcaaagccgg ggatgtcatt acctcgctga acggtaaacc
     5761 gatcagcaac tttgcggcgc tgcgcgctca ggtcggcact atgccggtcg gcagcaaaat
     5821 cagcctcggt ctgctgcgtg aaggtaaagc gattacggtt aatctggaac tgcagcagag
     5881 cagccagagt caggttgatt ccagcaccat cttcagcggg attgagggcg ctgaaatgag
     5941 taataaaggc caggataaag gcgttgtggt gagcagcgtg aaagcgaact cacccgccgc
     6001 gcaaattggc ctcaaaaaag gcgatgtgat tatcggcgct aaccagcagc cggtgaaaaa
     6061 tatcgccgag ctgcgtaaga ttctcgacag caagccgtcg gtgctggcgc tgaatattca
     6121 gcgtggtgat agttctattt atttgctgat gcagtaatca cctttgtccc ccttccacca
     6181 cggaaggggg caacactttt ctgtgaaact ccccacaact ccatacttct ttgcaccgtt
     6241 ttgtgcattt gcacaatgtc gaggcctgtc atcttcctta tgcttgtgct ctgctcacag
     6301 gagggattta tggctggctg gcatcttgat accaaaatgg cgcaggatat cgtggcgcgc
     6361 actatgcgca tcatcgatac caatatcaac gtaatggatg cccgcgggcg tattatcggc
     6421 agcggcgatc gggaacgtat tggtgaattg cacgaaggcg cgttgttagt gctgtcacag
     6481 ggccgggttg tggatatcga caacgccgtg gcgcgacacc tgcacggggt gcgtcagggg
     6541 attaatcttc ccttacgcct tgagggcgaa attgttggcg tgatcggtct caccggcgaa
     6601 ccagagcatc tgcgtaaata tggcgaactg gtgtgtatga ctgccgaaat gatgctggaa
     6661 cagtcgcggt taatgcacct tttggcgcag gatagccgtt tgcgtgaaga gctggtgatg
     6721 aacctgattc aggccgaaga aaatacgccg gcgctggtgg aatgggcaca gcgtttaggg
     6781 atcgatttga accagccgcg tgtggcggcg gtggtggaag tcgacagcgg ccagcttggc
     6841 gtcgatagcg caatggcgga acttcagcag ttgcagaatg cgcttaccac gccggagcgt
     6901 aacaacctga tagccattgt ttcccttacc gagatggtgg tgctcaaacc cgccttaaac
     6961 tcgtttggtc gttgggatgc tgaagatcat cgtaagcgcg tagagcagct tatctcgcga
     7021 atgaaagaga atggtcagct acgttttcgc gtggcgctgg gtaattactt taccggaccg
     7081 ggcagtattg cacgctcata ccgcacggcg cgcaccacga tgatggtcgg caaacagcgg
     7141 atgccagaaa gccgcagcta tttttatcag gatttgatgc tgccggtcct gttagatagc
     7201 ctgcgtggcg gctggcaggc caatgagctg gcgcgcccgc tggtaaaact caaagcgatg
     7261 gataacaacg ggttattacg tcggacactg acggcgtggt ttcgccataa tgtccagccg
     7321 ctggcgacct ctaaggcgct gtttattcat cgtaatacgc tggaatatcg gctaaatcgt
     7381 atttcggaac tgaccgggct ggatttggga aattttgacg atcggctgtt gctgtatgtg
     7441 gcgctacaat tggatgaaca gcgttaagcc cggcggcgct tcgcttacca ggcctacggg
     7501 gatatacctg taggccggat aaggcgtaac acgtcgccat ccggcaacac acagcttact
     7561 tacgggtaag cttgtccaga tcggcttcga tttcactgat cttattcgcg acgacgcttt
     7621 ccagatggcg caagtcgtcg aggatcttac gtttgagatc gagttctgag cggtcgcgct
     7681 ggcagatttg gtccagctcg tcaatcacat agcgtaggtt agggctaatc tcctgtactt
     7741 ctttataacc ctgaccgatg ccatcagcca ccaccgtttt acgctggcgt ggatacttaa
     7801 acttcacgct tttagcaaag aattcacctc tatccttttg aaaatagatt ttcaggatat
     7861 cgttattggc ttcttgccgc aggctgtaac gatcgatttc ctcaggattg gtaatgccca
     7921 gactttttag attgtcatac atagcggtat ccttcatcac actataactt ttgaataatt
     7981 aacgaaaaat tggtttttcg ccaccaatgg atacaaaaaa agcgcggttg atcgcagaag
     8041 acgtctcggc aacgtcatga gcaaaagggc ggcggttatt gatagcttaa gtaattcaac
     8101 gcgatattcc gtttatagag aaagcgtttg aggtcagtgt gggaaattga ccggaggcag
     8161 tggtcgataa ccttgagagg cggaatctat gtccggaacg tataatgcca ctattcgccg
     8221 ggtggtgatt tccgcctgga taggaaactc cattgaatat tatgattttc tattatacgg
     8281 cttagcaagc gcgctggtat ttggcccgct ttttttcccc tggcgccagc ccattgactg
     8341 caacgttatc ttcttttgcc agtttcggcg tgggatttat ttcccgaccg ctgggcgcgc
     8401 tattttttgg caacaggggg gatacgcttg ggcgtaaaaa cacgttatta atcacgttag
     8461 gcgggatggg cgcggtcacg tttctcatcg gttgcctgcc ttcttacgcc agtatcggcg
     8521 cgctgacacc tgctttactg gttattctac gttttctaca gggatttatg gttggaggtg
     8581 aatggggagg cgccatgttg atggtcgtgg aatatgctgc tggaaagcac cgggggcggt
     8641 taagcgcgct atcgcaaaca ggaggactca cgggacaatt attggcgaca ggcgtattta
     8701 tagtcgtgac ccaattaccg caggaggcgt tgttatcgtg gggatggcgt attccttttc
     8761 tgctcagtgc gcttttggtg ttgccgggat tatatatgcg tcatcgtctg gatgagacgc
     8821 ctgtcttccg tgcgtttaaa aagcagcagg ccattaatca taggcagcaa agggatgaaa
     8881 ggccggtggt caaagtagta cgagaacaat ggcgtagcat tttgctgatt ataattctgc
     8941 gttttgcgga aagcgttccc ttttttcttg ctaccgtctt cgcggtttcc tgggcgacga
     9001 cgcagcttgg gattgccagc ctgactattc tgtacattgt aatgttcacc tgtctgctgg
     9061 cgtatcccat gcacgtgcta tttggcatca tgtcggatcg gcgtggctgc cgtcaggtgt
     9121 atattttcgg cgcgcttttt gtcgcggcaa tggcttttcc ctttttctgg ctgctggaaa
     9181 gccgttcgct catactgatg acaatgggct acgttctgct tattaacatt ggtcataatt
     9241 cactgaatgc cgtgcaacct tcttttttcg ccggactgtt tcatccgcct gtacgctaca
     9301 gcggttcatc aattggcgct cagttggggg cggttgtggc agggggattc acgccgttta
     9361 tcgctaaagc gttaagcgca gtctatgata acagttggac tttggttgcc ggttatgtcg
     9421 ttttgactgc gctggcttcg gcgtttgcgg caaagattgc gccggacacc gtgttaccgc
     9481 attcgccgta atgcaaaggg gggctgtcgc ccccgctttt cactcgctta atcaatcgtg
     9541 cgcaataatt cgttaatgcc cactttacca cgcgttttgg cgtcgacttt tttcacgatc
     9601 accgcgcagt acaaactgta cttaccgtct tttgacggca ggttgccgga aacgaccacg
     9661 gagcccgccg gtacgcggcc atagtgaact tcaccggttt cgcgatcgta gattttggtg
     9721 ctctggccga ggtatacgcc catggaaatg acggaacctt cttcgacaat gacgccttcc
     9781 acgacttcag aacgcgcgcc aataaagcag ttgtcttcaa tgatggtcgg gttagcctgc
     9841 agcggctcca gtacgccgcc gatacccacg ccgccggaaa ggtgaacatt tttaccaatc
     9901 tgcgcacagg aacccaccgt cgcccaggtg tcaaccatgg tgccttcgtc aacgtaggcg
     9961 ccgatgttaa cgtaagacgg catcagcacg gtgttgcggg cgataaatgc gccctgacga
    10021 acggccgcag gcggaacgac gcggaagcct tctttctgaa aacgcgcttc gtcgtaatca
    10081 gcgaatttca tcggggcttt atcgaagtag cggctttccg caccgtcgat aacctggtta
    10141 tcgttaatac ggaaagagag cagaaccgct ttcttcaacc actggtgagt gacccactga
    10201 ccgtcgattt tttctgcgac acgcagcgcg ccggaatcaa gtagagaaat gacctgtttt
    10261 accgcctctc gggtcacggt atctacatta gccggcgtaa tatcggcgcg gcgctcaaaa
    10321 gcggtctcaa taacgttctg taactgctgc attgttaaac tctttcatat aaataaacac
    10381 actacccttt atcgtttgga ttgagggccg ctgtcaaccg ttgttgcacc tcaagttgca
    10441 gcacattatt aagtgcgcgc cgatccgctg tggcgattat gaataaatct tctactcgtt
    10501 caccaatggt tgtaattcgg gcaccatgaa gcgaaattcc cagatcggca aaaatttgtc
    10561 cgaccctggc cagcagacca ggttgatcga gcgcgatcaa ttccatgaat gattttctgt
    10621 cggtatgggt gggcagaaaa ttgacttccg tttcgaccgt aaagtgccgt aactttgccg
    10681 gttgccgacg cggctgcggc ggctgccagc tatgctgcgt aatggtctgt tcaagaccgg
    10741 tgcgaataac gtcatggcga tctgccgcca gcgggctgcc gtctggttcc agaacgataa
    10801 acgtatccat tgccatgccg tcgcgagtgg taaagatctg cgcgtcatgg acgcttaaat
    10861 tacgcctgtc cagctcggcg cagacggcgg caaacagata gggtctgtcc ggactccaga
    10921 taaaaatttc ggttccgccg cgcgtggctt gcggactgag caacactaac ggttggctca
    10981 gatcgtgctg caataaatgg cgtgcgtgcc aggcgagctg atttggacta tgacgaacaa
    11041 aatagttagc gcgacagcgg gtccagattt tgtgcagcgc ggcttcatca atattgtcca
    11101 ttcgcagcag cgccagcgcc tgaagctgat ggtgacgcac gcgctcacgc atatccggcg
    11161 tattttgcat tccacgcctg agctgttttt cagtggcgaa gtacagctcg cgcagcaggc
    11221 tctgtttcca gctattccac aaggtttcgt tggtcgcgca gatgtccgcg acggtcaggc
    11281 agaccagaaa acgcagccgt gtttcggttt gcacctcttc ggcaaactgc ttgatgactt
    11341 ccggatcctg gatgtcgcgg cgctgagcgg tgactgacat tagcaggtgt tggcgcacca
    11401 gccaggcgac cagttgcgtt tcgcgtgagt tcaaaccgtg cagttcggcg aaggtgagta
    11461 catcctgcgc gcccagtacc gaatggtcgc cgccgcgtcc tttcgcaata tcgtggaaca
    11521 gcgcggcgat caggatcagt tccggatggg gaagccgcgg ccagagatcg acgcatagcg
    11581 gatggcgctg gcgtgtctct tctttcgcaa agctctccag tttgagcatt acgcggatgg
    11641 tgtgttcatc caccgtgtat gcgtggaaca ggtcaaactg catttgtccg acgatgtgcg
    11701 accactgcgg catataagcc cacagtacgc tgtggcgatg catgggcagc aggccgcggc
    11761 tgaccgcgcc gggatggcgt agcatactca gaaacagagt gcgcgcctcc gggatgtaac
    11821 acagcggttg gctcaggtgg cggcgggcgt ggcgcaagtg gcgtaacgtc gtagagtaga
    11881 tgccggtgat cgcgctattg cgcaccatca tataaaacat ccgcaggatc gcttgcggtt
    11941 cgcggataaa cagcgtgtcg tcacgcagat caatgagcgt gccgcgcagt tgaaactcat
    12001 cgtcaacagg acgtggtttt tcatccgcag gcagcgccag aatcgcctcg tcaaatagct
    12061 gaagcagcat ctgattaagt tcgctcaccc gacgcgtaac ccggaagtag tctttcatca
    12121 tccgctcaac cggatcattg ccctcgccgc tgtagttaag gcgttgagcg acgcttaact
    12181 ggcggtcgaa cagcaggcgg ttatcgtagc ggctgaccac cagatgtagc gcaaagcgaa
    12241 tgcgccacag gatatgcagg cactcgttga gctccgcgca ctcagccggg gttaaaaagc
    12301 cgaatcccac catctcatcg agcgaggtgg cgccgaagtg acgtcgggcg acccactgca
    12361 atgtatggat atcgcgcagg ccgccggggc tgcttttaat atccggctcc agattatagc
    12421 tggtaccgtg atagcgctgg tggcgctggt tctgctcttc tactttggcg gcgtaaaatt
    12481 tgtcggacgg ccaaaaacct tcgctgaaaa tatgtttttg tagtgccaga aacagagcga
    12541 catcaccgat cagcaggcgc gtttcgatga ggtttgttgc aacggttaaa tcagacagac
    12601 cttccagcag acactcttcc agcgtacgta cgctatgccc gacatccagc ttgacgtccc
    12661 aaagtaaagt cagcagctcg ccgacctttt gcgcctgttc atcgggcagc tttttgcggc
    12721 ttaaaatgag cagatcaata tcggaaagcg gatgcagttc gccgcgtcca tagccgccga
    12781 cggcgaccag cgccagatcg gcaatctgac cgaaaccggc ctcaatccac aggcgttgca
    12841 acaactggtc gataaattcg gttcgggctt caataagctg ttcagcacaa atgccgctgt
    12901 caaatgcctc tcccagccag tgttgaaaga tgtcgatgcg ggctttgata ccggcgacgg
    12961 tcagttcagc gcgcggccag acgccagggt tttgcggctg gtcagggagg gtggggagtg
    13021 cggtattcgc gtgctgttca ggaagagtat tcatatgcgc cacccattaa aaagccggat
    13081 ggtggcgtga acgccttatc cggcctacga agtagtacaa tttgtaggcc tgataagatg
    13141 cgaaggcatc gccatcaggc aaaacattat tcgtcgtgtg tgatgatcgc cgggatggtg
    13201 tcatctttac gcagcgtcag aatttcacag ccgttttccg ttaccacaat agtatgctcg
    13261 tactgagcag acaagctgcg gtctttggtt tttaccgtcc agccgtcttt catggtgcgg
    13321 atacggtaat ccccggcatt cagcatcggt tcaatggtaa aggtcatgcc aggctgcaac
    13381 acgacgccac catcgtctgc atcataatgc agcacctgcg gttcttcatg gaagccgcga
    13441 ccaataccgt gtccgcagta ttcacgtacc acggagaaac cttcgccttc ggcatatttc
    13501 tggatggcgg cgccaatggt gcgcaggcgg atgcccggtt tcaccatttt gatgcccaga
    13561 tacaggctct cttgcgtgac gcggcacaga cgctcgccca gaatagtcgg tttgccgacg
    13621 ataaacatct ttgaggtatc gccgtggaat tcatctttaa tcacggtcac gtcgatgttg
    13681 acgatatcac catctttcag atgtttagcg tcatccggaa tgccgtggca caccacttca
    13741 ttaatagaga tacagacgga tttcggatag ccgtggtagc cgaggcaggc ggagatcgcg
    13801 tgttgttcgt taacgatgta atcgttacag atacggtcca gttcgccggt ggtgacgccc
    13861 ggtttgatat acggttcgat catttccagc acttcggctg ccagacggcc cgcgacgcgc
    13921 attttttcga tgtcttcaga tgtcttgata gagatagcca tgaattctgt ccatcagtgc
    13981 cgatgatttc ggcaataatt gtgtaagtgc tgacaatggt atcagtcagg ggtgtaccct
    14041 gccaaattga gaatcattct gaacttcgcc tttcgtgcca caggtgcgtt ggcgacattt
    14101 tttcacccca gtcacttact ggccgtaagc tcccggggat gcaaaaattt gccgcctgcc
    14161 tgtaacacga aattcatcgt tcaattcagc actgagtgcc aacaattatt ggtgtcggtg
    14221 gcgtatttgt ggtataaagc gtgccggact tccgatccat tcgaagacta cacacgatgg
    14281 acgggagcga caaatctcac tttgtgtaac aacacacacg tatcggcaca tattccgggg
    14341 tgccctttgg ggtcggtaat atgggatacg tggaggcata accccaactt atctatagag
    14401 gttttaaatc atggcaactg tttccatgcg cgacatgctc aaggctggtg ttcactttgg
    14461 tcaccagacc cgttactgga acccgaaaat gaagcctttc atcttcggcg cgcgtaacaa
    14521 agttcacatc atcaaccttg agaaaactgt accgatgttc aacgaagctc tggctgaact
    14581 gaacaagatc tctgctcgta aaggtaaaat ccttttcgtt ggtactaaac gcgctgcaag
    14641 cgaagcggtg aaagaagctg ctaacagctg cgaccagttc ttcgtgaacc atcgctggct
    14701 gggcggtatg ctgactaact ggaaaacagt tcgtcagtcc atcaaacgtc tgaaagacct
    14761 ggaaactcag tctcaggacg gtactttcga aaagctgacc aagaaagaag cgctgatgcg
    14821 tactcgtgag cttgagaaac tggaaaacag cctgggcggt atcaaagaca tgggcggtct
    14881 gccggacgct ctgttcgtta tcgatgctga ccacgagcac attgctatca aagaagcgaa
    14941 caacctgggt atcccggtat ttgctatcgt tgataccaac tctgatccgg acggcgttga
    15001 cttcgttatc ccgggtaacg atgacgcaat ccgtgctgtt agcctgtacc tgggcgctgt
    15061 cgctgcaacc gttcgtgaag gccgttctca ggatctggct tcccaggcgg aagaaagctt
    15121 cgtagaagcc gagtaataag gcttgataac tccctaaaat agttcgagtt gcaggaaggc
    15181 ggcaagctcg agaattcccg ggcgcttaca tcagtaagtg tccgggatga gcgagtgaag
    15241 gcaacgcgcc tgcggctcga aatatgaagg ggagagccct tatagaccag gtagtatcac
    15301 gtttggttag ggggcctgta tatggccccc tttttcactt ttatatctgt gcggtttgat
    15361 gccgggcaga tcaaatcttt cgaggatttt agaatggctg aaattaccgc atccctggta
    15421 aaagagctgc gtgagcgtac cggcgcaggc atgatggatt gcaaaaaagc gctgactgaa
    15481 gcgaatggcg acattgagct ggcaatcgaa aacatgcgta agtccggcgc tatcaaagcg
    15541 gcgaaaaaag caggcaacgt ggctgctgac ggcgtaatca aaaccaaaat cgacggtaac
    15601 gtcgctttca ttctggaagt taactgccag actgacttcg tggctaaaga tgctggcttc
    15661 caagcatttg ctgacaaagt gctggacgcc gctgttgctg gcaaaatcac tgacgtagaa
    15721 gtcctgaaag cgcagttcga agaagagcgc gttgctctgg ttgcgaaaat cggcgagaac
    15781 atcaacattc gtcgcgtcgc ttccctggaa ggcgacgtgc tgggttctta ccagcacggt
    15841 gcgcgcatcg gcgttctggt tgccgctaaa ggcgctgacg aagagctggt taagcagctg
    15901 gcgatgcacg ttgcggcaag caagccggaa ttcgttaagc cggaagacgt gtctgctgac
    15961 gtggtagaga aagagtacca ggtacagctg gacatcgcga tgcagtccgg taagccgaaa
    16021 gaaatcgcag agaaaatggt tgaaggccgc atgaagaaat tcaccggcga agtttctctg
    16081 actggtcagc ctttcgtcat ggaaccgagc aaatctgttg gccaactgct gaaagagcac
    16141 aacgctgacg tgactggctt catccgcttt gaagtgggcg aaggcattga gaaagtcgag
    16201 actgactttg cagcagaagt tgctgcgatg tctaagcagt cctgattttc ctgaggagcc
    16261 gcctgagggc ggcttctttt tgcgcctctc ttgtaaaatc agccgacgcc tggcgtctgc
    16321 gctgaaatgc gacgtacaat gtcgccggaa ttaactcata tcaatcgttg acagtctcag
    16381 gaaagaaaca tggctaccaa tgcaaaaccc gtctataaac gcattctgct taaattaagc
    16441 ggcgaagctc tgcagggtac ggaaggcttc ggtattgatg caagcatact ggatcgtatg
    16501 gctcaggaaa tcaaagaact ggttgaactg ggtattcagg ttggtgtggt gattggcggt
    16561 ggtaacctgt tccgtggcgc gggtctggca aaagcgggga tgaaccgcgt tgtgggcgac
    16621 cacatgggca tgttggccac cgtcatgaac ggcctggcaa tgcgtgatgc gcttcaccgc
    16681 gcctatgtga acgcccgcct gatgtcggca attcctttaa acggcgtgtg cgacaactac
    16741 agttgggccg aggctattag cctgctgcgt aataaccgtg ttgtgattct gtctgcaggt
    16801 acgggtaacc cgttcttcac taccgactct gcggcctgtc tgcgcgggat cgaaattgaa
    16861 gcggatgtcg tactgaaagc gaccaaagtg gatggtgtat tcactgccga tccggcaaaa
    16921 gatccttccg cgaccatgta cgatcagctg acctacagcg aagtgctgga taaagagctg
    16981 aaagtgatgg atctggcggc gttcacgctg gctcgtgacc acaaactgcc gattcgtgtt
    17041 ttcaacatga acaaaccggg cgcgctgcgt cgtgtggtga tgggcgaaaa agaagggacg
    17101 ttaatcacgg aataattccc gtgagcgcca aatacgggta agattctgtt ctattgacgg
    17161 gtcttattac ctggcagaaa ttaaacgaga ctatacttag cacatcttta tattgtgtga
    17221 ccgtctggtc tgactgagac tagttttcaa ggattcgtaa cgtgattagc gatatcagaa
    17281 aagatgctga agtacgcatg gaaaaatgcg ttgaagcgtt caaaacccaa atcagcaaag
    17341 tgcgcacggg tcgtgcttct cccagcctgc tggatggtat tgtcgtagaa tactatggca
    17401 ctccgacccc gctgcgccag ttggcaagcg taacggtaga agactcccgt accttaaaaa
    17461 ttaacgtgtt tgaccgttct atggggccag ccgttgaaaa agcgatcatg gcgtcagacc
    17521 tcggtttgaa tccaagctct gcgggcaccg atattcgcgt tccgctgccg ccgctgaccg
    17581 aagaacgtcg taaagatctg acgaaaattg tccgtggaga agcggagcag gcgcgtgtcg
    17641 ccgtacgtaa cgtccgccgt gatgcgaacg ataaagtaaa agctctgctg aaagataaag
    17701 cgatcagtga agatgacgat cgtcgctctc aggaagaagt acagaaaatg accgacgcgg
    17761 caattaagaa agtggatgcg gcgttggcag ataaagaagc agaactgatg cagttctgat
    17821 tgatctgtac gcagatataa actcattcca ccgctaaacc tggcggatga gtggtgtaca
    17881 aagcgccgcg cagaagacat tatcaggtct cctgtgcggc gttttgcttt ttattccgtt
    17941 tcaacacttc tggacgtttc atgaagcaat taaccattct gggctcgacc ggctctattg
    18001 gttgcagcac actggacgtg gtgcaccata atcctgatag ctttcgcgtt atcgcgctgg
    18061 tggcgggtaa aaatgtcgcc cgcatggcgg agcagtgcct ggagttctcg ccgcgttatg
    18121 ccgtgatgga cgatacgtcg agcgcagaac agctcaaaat aatgcttcag cagcatggca
    18181 gccgcaccga ggttctgagc ggtcagcagg ctgcctgtga gatggcggcg cttgatgagg
    18241 ttgggcatgt gatggcggcc attgtgggcg cggctggttt actgccgacc ttggcggcga
    18301 tccgcgcagg gaagacgatt ctgctggcga ataaagaatc gctggtgacc tgcgggcggc
    18361 tgtttatgga cgaagtgaaa cgcagcaacg cccggctttt acccgtcgat agcgaacata
    18421 acgcgatttt tcagagtttg ccgcaatcta ttcagcataa tctgggatac gctgaccttg
    18481 agcaaaatgg cgtaacgtcg attttgctta ccgggtctgg tggcccgttt cgtgaaacgc
    18541 ccatgtgcga tctggcagcg atgacgccgg atcaggcatg tcgtcatccg aactggtcga
    18601 tggggcgaaa aatctccgtc gactccgcca ccatgatgaa taaaggtctg gaatacattg
    18661 aagcgcgttg gttatttaat gccagcgcac gtcagatgga agtgttgatc catccgcaat
    18721 cggtcattca ttcgatggtg cgttatcagg acggcagcgt cctggcgcag cttggagaac
    18781 ctgacatgcg tacgcctatt gcgcatacga tggcatggcc gaatcgcgtc acgtccggcg
    18841 cgcagccgct cgatttttgc aaactcagcg cgctgacgtt tagcgcgcca gattatcagc
    18901 gttatccttg cctgaagctg gcgatggagg cgtttgagca aggtcaggcg gcaacgacgg
    18961 cgctcaatgc ggcaaacgaa atcaccgttg ccgcgtttct ggcgcaacag attcgtttta
    19021 ccgatatcgc cgggctcaat ttagcggtgc tggagaggat ggatttacac gaaccggcaa
    19081 gcgttgatga cgtattgcag gttgacgcca tcgcgcgtga agtagccaga aaacaagtga
    19141 tacggctctc acgctgacga ttatcccgcg acagaagatc gtgctatttg ttagcgttgg
    19201 gcttcggtga tatagtctgc gccacctgat cgcaggtttt tggctttttt cggtcaggtt
    19261 agccgtggtt ttacacggct tttttgtgga tacacaaaat cattcaggac gcatcgggac
    19321 ggcaggcgga tacgttcccg gcgtgcgcag acagcgcacg acaggggcga tgacgcgcag
    19381 tcattcgcga agcgaaccga agagaatgtg tataaaggct tcagtattcc tgagtaccgc
    19441 taaatccttt cagggacaaa aaacgcgtta tgttgtctgc aactcaacca gtaagcgaaa
    19501 atttgccagc acatggctgc cgtcatgttg ccataattat ggatggcaat ggccgctggg
    19561 cgaaaaagca agggaagatc cgggcctttg ggcataaagc cggggcgaag tccgtccggc
    19621 gagcggtctc ttttgctgcc aataacggta ttgatgcgtt aacgctgtat gcctttagta
    19681 gtgaaaactg gaaccgacca gcgcaggaag tgagcgcgtt aatggagctg tttgtgtggg
    19741 cgctggatag cgaagtcaaa agcctgcacc gccataacgt tcgcctgcgt attatcggcg
    19801 atatcagccg atttaactca cgtttacaag aacgtattcg caaatcagaa gcgcttaccg
    19861 cccataatac ggggctaacg ttgaatatcg ctgcgaatta cggcggacgt tgggatattg
    19921 tccagggagt ccgacaactg gcggagctgg tgcaggctgg agtgctgcgc cccgatcaga
    19981 ttgatgaaga gagactaggc cagcaaatct gtatgcatga gctggcgcct gtggatttag
    20041 taattaggac tgggggagag catcgcatta gtaacttttt gctttggcaa attgcctatg
    20101 ccgaacttta ctttacggat gttctctggc ccgatttcga tgaacaagac tttgaaggtg
    20161 cgctgcatgc ctttgctaat cgagagcgtc gtttcggcgg taccgagcct ggtgatgaca
    20221 aagcctgatg ggggtcgctt ttgctgaagt atcgcctgat ttctgctttt gtgttaatac
    20281 ccgcggtcat cgctgcgctt tttttattgc cgccggtggg gttcgccatt attacgctgg
    20341 ttgtctgtat gctggccgcg tgggaatggg ggcagttaag cggtttcgcc gcgcgttcac
    20401 agcgggtttg gctggcggtg ctgtgtggtc tgttattggc gctgatgtta tttttgttgc
    20461 ctgagtatca tcacaacatt cgtcaaccgc tggttgagat gtcgctttgg gcatcgttag
    20521 gatggtgggt tgtcgcgcta ctgctggtgc tattttatcc cggttcggcg gcaatctggc
    20581 gcaactcaaa aacattgcgt ctcattttcg gtttgttaac tattgtgcca tttttctggg
    20641 gcatgctggc gctgcgcgcc tggcactatg acgagaatca ttacagtggc gcaatatggt
    20701 tactctatgt catgatcctg gtctggggag cggactctgg cgcgtatatg tttggtaaat
    20761 tgtttggcaa acataagctg gcgccgaagg tttccccggg taaaacctgg caagggttta
    20821 tcggcgggct tgctacggct gccgtgatct catggggtta cggtatgtgg gcgaatctga
    20881 atgttgcgcc tgttatcttg ctgatttgct ctgtggtggc ggctctggct tctgtactgg
    20941 gcgacctcac cgagagtatg tttaagcgcg aagcaggaat taaggatagc ggccacttga
    21001 tcccaggcca tggcggcatt ctggaccgaa ttgacagtct gacggctgcc gtaccggtct
    21061 ttgcttgcct gttgttactg gtgttcagga cgctctaacg gaaggtttta tgctgagtat
    21121 tctctggaat ctggctgcat tcatcatcgc actgggcgtg ctgatcactg tgcatgaatt
    21181 tggtcatttc tgggttgccc ggcgctgcgg tgtgcgagtt gagcgctttt ccatcggttt
    21241 tggcaaagcg ctctggcgtc gtaccgatcg gtacggcacc gagtatgtca tcgccctgat
    21301 cccgctgggc ggctacgtca aaatgctgga tgagcgcgcc gaaccggtag cgccggaatt
    21361 gcgtcgtcac gccttcaata acaaaacggt gggccagcgc gccgcaatta ttgccgcagg
    21421 tccggttgcg aacttcattt ttgctatctt tgcttactgg ctggtcttta tcatcggcgt
    21481 ccctggcgtt cgtccggtca ttggcgaaat aacgcccaac tcgattgctg cgcaggcgca
    21541 aattgcgcct ggtacggaac ttaaagccgt tgatggtatc gaaacccctg attgggatgc
    21601 cgtgcgttta caactggtgt ccaaaattgg cgatcagcag acgacggtga gcgtcgcgcc
    21661 gtttggcagc gaccagcggc aggacaaaac gcttgattta cgtcactggg catttgagcc
    21721 tgataagcaa gatcctgtat cttctttagg gattcggccc cgcgggccac agattgaacc
    21781 ggtactgtca gaagtgcagg cgaattccgc agccagtaaa gcgggtttgc aagcaggcga
    21841 caggatcgtt aaagtcgatg gtcagccgtt aacgcagtgg atgaaattcg tgacgtttgt
    21901 acgtgataat cccggtaagc cgttagcgtt agagattgaa aggcagggga gcgccttgtc
    21961 gttgacgtta acgccggata cgaaatcggt taacggaaag gcggaagggt ttgcaggcgt
    22021 ggtgcctaaa attattcctc tgccggaaga gtacaagact atacgccagt atgggccttt
    22081 tagcgccatc ctcgaagcca cggataagac gtggcagttg atgaagctga cggtcaatat
    22141 gctgggtaaa ttgataaccg gtgatgtgaa actgaacaac ctcagtgggc cgatttctat
    22201 cgctcagggg gctgggatgt cagcggagtt cggggtgatt tattacctga tgttccttgc
    22261 gctaatcagc gtgaacttag ggataattaa cctgtttccg ctgcccgttc ttgacggggg
    22321 tcatctgctg ttcctggcga ttgaaaagct taagggcggg ccggtatccg agcgggttca
    22381 agactttagt tatcgcattg gctcgatttt gctggtgttg ttaatggggc ttgcactttt
    22441 caatgatttc tctcggttgt aagagagtta gttaggaaga acgcataata acgatggcga
    22501 tgaaaaagtt gctcatagcg tcgctgctgt tcagcagcgc caccgtatac ggtgctgaag
    22561 ggttcgtagt gaaggacatt catttcgaag gcctgcagcg agtcgccgtt ggtgcggctc
    22621 tcctcagtat gccggtgcgc acaggcgaca cggttaatga tgaagatatc agtaacacca
    22681 ttcgcgctct gttcgccacc ggcaactttg aggacgtccg cgtcctgcgc gatggtaata
    22741 cccttctggt tcaggtaaaa gaacgtccga ccattgccag catcactttc tccgggaaca
    22801 agtcggtgaa agatgacatg ctcaagcaaa acctcgaagc gtctggcgta cgtgttggcg
    22861 agtctctgga tcgcaccacg ctgtctgata tcgaaaaagg tctggaagac ttttactata
    22921 gcgtaggtaa atacagcgcc agcgttaagg cggtcgtcac gccgctaccg cgcaaccgtg
    22981 ttgatcttaa actggtgttc caggagggcg tatcggcgaa gatccaacag atcaacatcg
    23041 tcggtaacca tgcctttagc accgaagaac tcatttctca tttccagttg cgtgacgaag
    23101 tgccgtggtg gaacgtcgtc ggcgatcgta aataccagaa acagaagctg gcgggcgacc
    23161 ttgaaacctt gcgcagctac tatctggatc gcggctacgc gcgtttcaat attgactcca
    23221 cgcaagtgag tctgacgccg gataagaaag ggatctacat caccgtcaat atcaccgaag
    23281 gcgatcagta caagctttcc ggggttcagg tgagcggtaa cctggccgga cattccgctg
    23341 aaattgagaa actgacgaaa attgaaccgg gcgagctcta taacggcacc aaagtgacca
    23401 aaatggaaga tgacatcaaa aagcttctgg gtcgctatgg ttacgcctat ccgcgcgtgc
    23461 agtcacagcc tgaaattaac gatgctgaca aaaccgtaaa actgcgcgtg aacgtcgatg
    23521 cgggcaaccg tttctacgtg cgtaagatcc gctttgaagg caacgatacc tcaaaagatt
    23581 ccgttctgcg ccgtgaaatg cgccagatgg aaggggcgtg gctgggcagc gacctggttg
    23641 accaggggaa agagcgtctg aaccgtctcg gcttctttga aaccgtcgac accgacacgc
    23701 agcgcgttcc ggggagcccg gatcaggttg atgtggtgta caaggtgaaa gagcgtaaca
    23761 ccggtagctt caacttcggt atcggttacg gtacagaaag cggcgtgagc ttccaggccg
    23821 gcgttcagca ggacaactgg ttaggtaccg gttattccgt ggggattaac ggtaccaaaa
    23881 atgactacca gacctacagc gaactgtccg ttactaaccc atactttacc gttgacggcg
    23941 tgagcctcgg tggtcgtatc ttctataacg actttgaagc ggatgatgcc gacctgtccg
    24001 actataccaa caagagttac ggtacggatg tgacgcttgg cttccccatc aacgagtaca
    24061 acacgttgcg tgctggtctg ggctatgtcc ataacaaact gtccaacatg cagccgcaga
    24121 tcgcgatgga tcgttatctt gaatcgatgg gcgaccctga tgccagcgat tttgccgctg
    24181 acgacttcac ctttaactac ggctggacct ataacaagct tgaccgtggt tatttcccga
    24241 cggacggctc gcgagtcaac ctgacgggta aggtgacgat tccaggttcc gacaacgaat
    24301 actacaaagt gtcgctggat accgcgacct atgtgcctat tgataacgac cacaagtggg
    24361 tggttctggg gcgtactcgt tggggttacg gcgatggttt aggcggcaag gaaatgccgt
    24421 tctatgagaa cttctatgcc ggtggttcca gtaccgtgcg tggtttccag tcgaatacta
    24481 tcggcccgaa agcggtctat aaaaatggcg cccacactag ttgggacgat gatgatgatt
    24541 acgaagactg tactcaggaa tcaggctgta aatcagatga tgcggtaggt ggtaatgcca
    24601 tggctgtcgc cagcctggaa tttattaccc cgacgccgtt catcagcgaa aagtatgcca
    24661 actcggttcg tacctccttc ttctgggata tgggtaccgt ttgggatacg aactgggatc
    24721 cgtcatctgc gccgtcagat gtaccggatt acagcgatcc aggcaacatc cgtatgtccg
    24781 cgggtatcgc attacaatgg atgtccccat tggggccgtt ggtcttctcc tacgcccagc
    24841 cgtttaaaaa gtacgatgga gacaaagccg agcagttcca gtttaacatt ggtaaaacct
    24901 ggtaattgtt cactgcaaag gaatgcattg gtagtgtagc gatgactttt ggcgatgccc
    24961 ccagggatcg ccaggccacg caaagagctg taccttcggg tgcaaatggg atggtaagga
    25021 gtttattgtg aaaaagtggt tattagctgc aggtcttggt ttggcgatgg ttacgtccgc
    25081 acaggctgct gacaaaattg caatcgtcaa catgggtaat ctgttccaac aggttgcgca
    25141 gaagacgggt gtatccaata cactggaaaa cgaatttaaa ggccgtgcgg ctgaactgca
    25201 aaaaatggaa accgatctgc aatctaaaat gcagcgtctg caatccatga aagcaggtag
    25261 cgatcgtact aagctggaaa aagacgtgat gtctcagcgc cagactttcg cacaaaaagc
    25321 gcaggctttt gagaaagatc gcgctcgtcg ttccaacgaa gaacgcaaca aactggtgac
    25381 tcgtatccag actgcggtga aaaaagtggc taacgaccag agtatcgatc tggtggtaga
    25441 cgcaaacacc gttgcttaca acagcagcga tgtgaaagac atcaccgctg acgtactgaa
    25501 acaggttaaa taagtaatgc cttcaattcg actggctgac ttagcagaac agttggatgc
    25561 agaattacac ggtgatggcg atatcgtcat caccggcgtt gcgtccatgc aatctgcaac
    25621 aacaggccac attacgttta tggtaaatcc taagtaccgt gaacacttag gtttatgcca
    25681 ggcttctgcg gttgtcatga cgcaggacga tcttcctttt gccaagagcg cggcgctggt
    25741 agttaaaaat ccctacctga cctacgcgcg catggcgcaa attttagata ctacgccgca
    25801 acccgcgcag aatatcgcgc caagcgccgt gattgatgcg acggcaacgc tgggtagcaa
    25861 tgtttcagtc ggcgcgaatg cggtgattga atctggcgta caactgggcg ataacgtggt
    25921 tatcggcgca ggctgtttcg tcggaaaaaa tagcaaaatc ggggcgggtt cacgcttgtg
    25981 ggcgaacgta acgatttacc acgacattca gatcggtgag aattgcctga tccagtccag
    26041 tacggtgatc ggcgcggacg gttttggcta cgctaacgat cgtggcaact gggtgaagat
    26101 cccacaactg ggccgggtca ttattggcga tcgtgtcgag atcggcgctt gtaccaccat
    26161 tgaccgtggc gcgttggatg atactgttat tggcaatggc gtgattattg ataatcagtg
    26221 ccagattgca cataacgtcg tgattggcga caatacggca gttgccggtg gcgtcattat
    26281 ggcgggtagc ctgaagattg gccgttactg catgattggc ggcgccagcg tgatcaatgg
    26341 gcatatggaa atatgcgaca aagtcacggt aactggcatg ggtatggtga tgcgtcccat
    26401 cacggaaccg ggcgtctact cctcaggcat tccgctgcaa cccaacaaag tatggcgtaa
    26461 aactgctgca ctggtgatga acattgatga tatgagcaag cgtctcaaag cgattgagcg
    26521 caaggttaat caacaagact aacgttccgc cttgtagttg ccattctttt ccggcctgtc
    26581 acattcatac gattgcggca ggccgtgtta ttattgcctt tttgtatatt tggacaggaa
    26641 gagtattttg actactaaca ctcatactct gcagattgaa gagattttag agcttctgcc
    26701 gcaccgtttt ccgtttttac tggtcgatcg cgtgctggac tttgaagaag gtcgttttct
    26761 gcgtgcggtg aaaaatgtct ccgtcaacga gccgtttttc caggggcatt tcccgggcaa
    26821 accgattttg ccaggcgtgc tgattctgga agcgatggcg caggcaaccg gtattctggc
    26881 gtttaaaagc gttggtaaac tggaacctgg cgaactgtat tatttcgcgg gtattgatga
    26941 agcgcgcttt aagcgtccgg tggtgccagg cgatcagatg atcatggaag tcactttcga
    27001 gaaaacgcgc cgtggcctga cccgctttaa aggggttgcg ctggtcgacg gtaaagttgt
    27061 gtgcgaagca accatgatgt gtgctcgtag ccgggaggcc tgattcgtga ttgataaatc
    27121 cgtctttatt catcctaccg ccattgtgga agacggcgct gtaattggcg ctaatgccca
    27181 cattggtccc ttttgtattg ttgggccgca ggtcgaaatt ggtgagggaa ccgtactgaa
    27241 gtctcatgtg gtcgtaaatg gtcaaaccaa aatcggccgc gacaacgaga tttatcagtt
    27301 tgcctccatc ggtgaagtga accaggatct gaaatatgcg ggtgagccaa cccgtgtgga
    27361 aattggcgat cgtaaccgca tccgcgaaag cgtcaccatt catcgtggta cagtgcaggg
    27421 cggtgggttg acgaaggtgg gtagcgataa cctgctgatg atcaatgcgc atgtcgcaca
    27481 tgattgtacg gtaggtaatc gctgtatcct cgccaacaac gccacgctgg cggggcacgt
    27541 atcagtcgat gattttgcga tcatcggcgg tatgacggca gttcatcaat tctgcattat
    27601 cggtgcgcat gtgatggtcg gcggctgctc cggcgtggcg caggatgtcc ctccgtatgt
    27661 gattgcgcag ggtaaccatg cgacgccgtt cggggtaaat atcgaagggc tgaagcgtcg
    27721 cggctttagc cgtgaagggc tggtggcgat tcgtaatgcc tacaaactgt tgtaccgcag
    27781 tggtaaaacg ctcgacgaag cgaagctgga aatcgctgaa cttgctgaaa agcatccgga
    27841 agtgaaggcg tttaccgagt tctttgagcg ttcaacgcgc ggtccgattc gttaatggcg
    27901 gcacagcgtc ctttaacgat tgccctggtc gccggtgaaa cgtccggcga tattcttggc
    27961 gcaggcttaa ttcgtgcgct gaaagcgcgc gtacccaacg cccgttttgt gggcgttgcg
    28021 gggccgcgta tgcaggccga agggtgtgaa gcctggtacg agatggaaga gctggcggtc
    28081 atgggcattg ttgaagtgct cggacgttta cgccgtttgt tgcatatccg cgccgatctg
    28141 acccgccgtt ttaccgaact caagcccgat gtctttgtcg ggattgatgc ccctgatttc
    28201 aatattaccc tcgaaggtaa tctgaaaaaa caagggatta agaccattca ttatgtcagc
    28261 ccgtccgttt gggcctggcg acagaaacgc gttttcaaaa taggcagatc cacccatatg
    28321 gtgttggctt ttctgccttt cgaaaaagcg ttttacgata aatttaacgt cccgtgccgc
    28381 tttatcggtc acaccatggc ggatgccatg ccgctggacc cggataaaaa tgcggcgcgc
    28441 gacgtgctgg gtatcccgca tgacgcccat tgtctggcgc tactgccagg cagccgtggc
    28501 gcggaagtgg aaatgctcag cgccgacttc ctgaaaaccg cacaattgct gcgacagcgc
    28561 tatcccgatc tggaagtggt agtgccgctg gtgaacgcga aacgccgcga gcagtttgaa
    28621 aaaattaaag cggaggttgc gccggatctc gccgttcatt tgct
//
LOCUS       DAGWFR010000037        28378 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.037, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000037 DAGWFR010000000
VERSION     DAGWFR010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 28378)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28378)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28378
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.037"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..1357
                     /gene="fruA"
                     /locus_tag="MOX77_001679"
     CDS             <1..1357
                     /gene="fruA"
                     /locus_tag="MOX77_001679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PTS fructose transporter subunit IIBC"
                     /protein_id="HCA3357237.1"
                     /translation="PTGVAHTFMAAEAIETEAKKRGWWVKVETRGSVGAGNAITPEEV
                     AEADLVIVAADIEVDLAKFAGLPMYRTSTGLALKKTAQELDKAVAEATPYQPAGKASQ
                     AATEGKKESAGAYRHLLTGVSYMLPMVVAGGLCIALSFAFGIEAFKVPDTLAAALMQI
                     GGGSAFALMVPVLAGYIAFSIADRPGLTPGLIGGMLAVSTGSGFIGGIIAGFLAGYMA
                     KLISTKLKLPQSMEALKPILIIPLISSLVVGLAMIYLIGKPVAGILEGLTHWLQTMGT
                     ANAVLLGAILGGMMCTDMGGPVNKAAYAFGVGLLSTQTYAPMAAIMAAGMVPPLALGL
                     ATMVARRKFDKAQQEGGKAALVLGLCFITEGAIPFAARDPMRVLPCCIVGGALTGAIS
                     MAVGAKLMAPHGGLFVLLIPGAITPVLGYLLAIVAGTLVAGLAYAVLKRPETEVAAKA
                     A"
     gene            complement(1422..2279)
                     /gene="nfo"
                     /locus_tag="MOX77_001680"
     CDS             complement(1422..2279)
                     /gene="nfo"
                     /locus_tag="MOX77_001680"
                     /EC_number="3.1.21.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease IV"
                     /protein_id="HCA3357238.1"
                     /translation="MKYIGAHVSAAGGLANAPARAAEIGATAFALFTKNQRQWRAAPL
                     TPQVIDDFKIACEKYHFSAAQILPHDSYLINLGHPVSEALEKSRDAFLDEMQRCEQLG
                     LTLLNFHPGSHLMQIAQEDCLARIAESINIALAQTEGVTAVIENTAGQGSNLGFEFEQ
                     LAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPEACEKTFAEFGKIVGFQYLRGMHLN
                     DAKSAFGSRVDRHHSLGEGNIGHDAFRWIMQDARFDGIPLILETINPDIWAEEIAWLK
                     AQQIAEAMA"
     gene            complement(2358..3407)
                     /locus_tag="MOX77_001681"
     CDS             complement(2358..3407)
                     /locus_tag="MOX77_001681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeiH family protein"
                     /protein_id="HCA3357239.1"
                     /translation="MTELTLQNHRRTMWHFIPGLALSAVITGVALWGGAIPAVAGAGF
                     SALTLAILLGMVIGNTVYPQIWKQCDGGVLFAKQHLLRLGIILYGFRLTFSQIADVGI
                     SGIVIDVLTLSSTFMLACFLGQKVFGLDRHTSWLIGAGSSICGAAAVLATEPVVKAEA
                     SKVTVAVATVVIFGTIAIFLYPAMYPLLAHWFSPETYGIYIGSTMHEVAQVVAAGHAV
                     SPDAENAAVIAKMLRVMMLAPFLIILAARVKQLSPATGAEKSKITIPWFAIFFIVVAI
                     FNSFHLLPKAVVDMLVTLDTVLLAMAMAALGLTTHVSALKKAGAKPLLMALALFAWLI
                     IGGGAINVLIHSLIA"
     gene            3528..4391
                     /locus_tag="MOX77_001682"
     CDS             3528..4391
                     /locus_tag="MOX77_001682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCA3357240.1"
                     /translation="MHITLRQLEVFAEVLKSGSTTQASVMLSLSQSAVSAALTDLEGQ
                     LGVQLFDRVGKRLVVNEHGRLLYPRALALLEQAVEIEQLFREDNGAIRVYASSTIGNY
                     ILPAMIARYRQHYPALPLELSVGNSQDVINAVLDFRVDIGLIEGPCHSTEIISEPWLE
                     DELVVFAAPSSPLTQGPVTLEQLAASPWILRERGSGTREIVDYLLLSHLPRFHMAMEL
                     GNSEAIKHAVRHGLGISCLSRRVIAEQLQAGTLGEVAVPLPRLVRTLWRVHHRQKHLS
                     NALQRFLSYCE"
     gene            4581..6050
                     /gene="lysP"
                     /locus_tag="MOX77_001683"
     CDS             4581..6050
                     /gene="lysP"
                     /locus_tag="MOX77_001683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine-specific permease"
                     /protein_id="HCA3357241.1"
                     /translation="MGSKTKTTEAPALRRELKARHLTMIAIGGSIGTGLFVASGATIS
                     LAGPGGALFSYILIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEEGFGFALGWNY
                     WYNWAVTIAVDLVAAQLVMGWWFPDTPGWIWSALFLCVIFLLNYISVRGFGEAEYWFS
                     LIKVATVIIFIIVGVAMIIGIFKGVEPVGWSNWTTGDAPFAGGFAAMIGVAMIVGFSF
                     QGTELIGIAAGESENPEKNIPRAVRQVFWRILLFYVFAILIISLIIPYTDPNLLRNDV
                     KDISVSPFTLVFQHAGLLSAAAIMNAVILTAVLSAGNSGMYASTRMLYTLACDGKAPR
                     IFAKLSRGGVPRNALYATTVIAGLCFLTSMFGNQTVYLWLLNTSGMTGFIAWLGIAIS
                     HYRFRRGYVLQGYDVNDLPYRSGFFPLGPIFAFVLCLIITLGQNYEAFLKDTIDWGGV
                     AATYIGIPLFLLIWFGYKLIKGTHFVRYSEMHFPERVKK"
     gene            6396..8387
                     /gene="cirA"
                     /locus_tag="MOX77_001684"
     CDS             6396..8387
                     /gene="cirA"
                     /locus_tag="MOX77_001684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catecholate siderophore receptor CirA"
                     /protein_id="HCA3357242.1"
                     /translation="MFRFNPFVRVGLCMSAVTLAWPVAAATDDGETMVVTASAIEQNL
                     KDAPASISVITQQDLQRRPVQNLKDVLKEVPGVQLTNEGDNRKGVSIRGLDSSYTLIL
                     IDGKRVNSRNAVFRHNDFDLNWIPVDAIERIEVVRGPMSSLYGSDALGGVVNIITKKI
                     GQKWHGSVTVDSTIQEHRDRGDTYNGQFFTSGPLIDGVLGMKAYGSLAKREKDEQQSS
                     ATTATGETPRIEGFTSRDGNVEFAWTPNENHDVTAGYGFDRQDRDSDSLDKNRLERQN
                     YALSHNGRWDLGNSELKFYGEKVENKNPGNSSPITSESNSIDGKYVLPLASVNQFLTF
                     GGEWRHDKLSDAVSLTGGSSTKTSASQYALFLEDEWRIFEPLALTTGIRMDDHETYGD
                     HWSPRAYLVYNATDTLTVKGGWATAFKAPSLLQLSPDWATNSCRGGCRIVGSPDLKPE
                     TSESWELGLYYRGEEGILEGVEASVTTFRNDVDNRISISRTPDVNAAPGYSNFVGFET
                     NSRGQRVPVFRYYNVNKARIQGVETELKVPFNEAWKLSLNYTYNDGRDVSNGGNKPLS
                     DLPFHTANGTLDWKPAQLEDWSFYVSGNYTGRKRADSATAKTPGGYVVWDTGAAWQAT
                     KNVKLRAGVLNVGDKDLKRDDYGYTEDGRRYFMAVDYRF"
     gene            complement(8431..9753)
                     /locus_tag="MOX77_001685"
                     /pseudo
     CDS             complement(8431..9753)
                     /locus_tag="MOX77_001685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461143.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            complement(9786..10673)
                     /gene="serB"
                     /locus_tag="MOX77_001686"
     CDS             complement(9786..10673)
                     /gene="serB"
                     /locus_tag="MOX77_001686"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HCA3357243.1"
                     /translation="MSIIYFITTQDIDTFQKKLQETLFNAVTMPFPLLFDKRYAALIN
                     TAYLKLTLPAECLTPEFYRYLRELSLQWQFDFFIKPQPLPANGIIAFDMDSTFIAEEG
                     VDEIARELGMSTQITAITQQAMEGKLDFNASFTRRIGMLKGTPKAVLNAVCDRMTLSP
                     GLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTDNITLP
                     IMNAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAWKAKPVVREKIH
                     HQINYHGFELLLFLIEDEL"
     gene            10890..12257
                     /locus_tag="MOX77_001687"
     CDS             10890..12257
                     /locus_tag="MOX77_001687"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HCA3357244.1"
                     /translation="MESCLDIFKIVIGPSSSRTVGPMRAACHFISLLREQETLPLIRE
                     IEIELYGALSLSRKCHNVDTALYLGLLGCQPENVDLRSHMAVIKRAENENKIELPLSD
                     AGGITIKVKIIANHQAHPGHPYAMTFCARDDYFTVYEETWFSTGAGQVRKHGEPLTPS
                     LPLRTVSPFEFSHAAQLLALCRRNGLSVAALMMKNELCRHSPQTLQNYLAQIWDVMQQ
                     AVYRGLHTEGVLPGPYQVPRRACALHKTLQANRSASDFLTALNWVNAFAIAVSEENAS
                     GGQIVTAPTNGACGIIPAALCWYDKFVTPLEPGALTRFFLTAAAIAMLFKQNASILGS
                     EVGCQGEIGVACSMAAAGLAELMGASVEQTLSAAEIAMEHHLGLTCDPLGGQVQIPCI
                     ERNAISAVKAINAATMAMSRVSEPCISLDEIIAAMYETGKDMSAKYRETYHGSLGKIQ
                     PRKRG"
     gene            12262..12651
                     /locus_tag="MOX77_001688"
     CDS             12262..12651
                     /locus_tag="MOX77_001688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HCA3357245.1"
                     /translation="MKYNTMNNDEIILSLCARLKETRLSLAMTQQQLADRAHVGIATI
                     KRIEKGGGLNLDTLISLLRALDKLHNLDAVLFESELRNFHESYEGGEGSGRLQVRQQA
                     ADLNNKSSAPQSEEVNYSAALENSLCW"
     gene            complement(12640..13497)
                     /gene="fghA"
                     /locus_tag="MOX77_001689"
     CDS             complement(12640..13497)
                     /gene="fghA"
                     /locus_tag="MOX77_001689"
                     /EC_number="3.1.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461139.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-formylglutathione hydrolase"
                     /protein_id="HCA3357246.1"
                     /translation="MEMLEEHRCFGGWQQRWRHHAATLNCAMTFSIFLPPTQDNEPPP
                     VLYWLSGLTCNDENFTTKAGAQRIAAELGIVLVMPDTSPRGEQVADDSGYDLGHGAGF
                     YLNATQPPWASHYRMYDYLRDELPALIQTQFNVSDRCAISGHSMGGHGALIMALKNPG
                     KYTSISAFAPIVNPSRVPWGIKALTAYLGEDESAWTEWDSCELMLASQPQDAIPVLID
                     QGDSDQFLADQLQPAVLAEAARQTAWPMTLRIQPGYDHSYYFIASFIEDHLRFHARYL
                     RDEHETSPT"
     gene            13827..14495
                     /gene="folE"
                     /locus_tag="MOX77_001690"
     CDS             13827..14495
                     /gene="folE"
                     /locus_tag="MOX77_001690"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HCA3357247.1"
                     /translation="MPSLSKEAALVHDALVARGLETPLRPPMDELDNETRKSLIAGHM
                     TEIMQLLNLDLSDDSLMETPHRIAKMYVDEIFAGLDYANFPKITLIENKMKVDEMVTV
                     RDITLTSTCEHHFVTIDGKATVAYIPKDSVIGLSKINRIVQFFAQRPQVQERLTQQIL
                     TALQTLLGTNNVAVSIDAVHYCVKARGIRDATSATTTTSLGGLFKSSQNTRQEFLRAV
                     RHHP"
     gene            14510..15652
                     /locus_tag="MOX77_001691"
     CDS             14510..15652
                     /locus_tag="MOX77_001691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF418 family protein"
                     /protein_id="HCA3357248.1"
                     /translation="MERNVTLDFVRGVAILGILLLNISAFGLPKAAYLNPAWYGAIVP
                     EDAWSWAILDIVAQAKFLTLFALLFGAGLQMLLPRGKQWIQSRLTLLVLLGFIHALFF
                     WDGDILLAYGLVGLICWRLVRDAPSVKSLFNTGILLYLVGIGVLLLLGVVSSSETSRA
                     WTPDASAILYEKYWKLNGGMEAISNRAEMLSNSLLALGAQYGWQLAGMILLGAALMRS
                     GWLKGQYSLRHYRRTGVLLVALGLMINLPAVILQWRLDWAYRWCAFLLQAPRELSAPL
                     QTLGYAALMFGFWPQLSRCRLTLAIACVGRMALTNYLLQTIICTTLFYQFGLFMKFNR
                     LELLFFVVPVWAINLLFSVIWLRFWRQGPVEWLWRQLTLRASGSLR"
     gene            15802..16824
                     /gene="galS"
                     /locus_tag="MOX77_001692"
     CDS             15802..16824
                     /gene="galS"
                     /locus_tag="MOX77_001692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator GalS"
                     /protein_id="HCA3357249.1"
                     /translation="MITIRDVARQAGVSVATVSRVLNNSALVSPDTRDAVMQAVTLLG
                     YRPNANAQALATQVSDTIGVVVMDVSDAFFGALVKAVDLVAQQHQKYVLIGNSYHEAE
                     KERHAIEVLIRQRCNALIVHSKALTDRELSDFMDQIPGMVLINRIVPGYAHRCVCLDN
                     VSGARMATRMLLNNGHQRIGYLAFSHRIEDDAMRREGWLHALQEQGVAASESWIGTGT
                     PDMQGGESAMVELLGRNLQLTAVFAYNDNMASGALTALKDNGIAIPLHLSVIGFDDIP
                     IARYTDPQLTTVRYPIASMAKIATELALQGAAGTLDITATHCFMPTLVRRHSVAWRQN
                     AVLITN"
     gene            17323..18321
                     /gene="mglB"
                     /locus_tag="MOX77_001693"
     CDS             17323..18321
                     /gene="mglB"
                     /locus_tag="MOX77_001693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/glucose ABC transporter
                     substrate-binding protein MglB"
                     /protein_id="HCA3357250.1"
                     /translation="MNKKVLTLSAVMASLLFGAHAHAADTRIGVTIYKYDDNFMSVVR
                     KVIEKDGKSAPDVQLLMNDSQNDQSKQNDQIDVLLAKGVKALAINLVDPAAAGTVIEK
                     ARGQNVPVVFFNKEPSRKALDSYDKAYYVGTDSKESGVIQGDLIAKHWQANQGWDLNK
                     DGKIQYVLLKGEPGHPDAEARTTYVVKELNDKGIQTEQLALDTAVWDTAQAKDKMDAW
                     LSGPNANKIEVVIANNDAMAMGAVEALKAHNKSSIPVFGVDALPEALALVKSGAMAGT
                     VLNDANNQAKATFDLAKNLAEGKGAADGTSWKIENKIVRVPYVGVDKDNLSEFTQK"
     gene            18455..19973
                     /gene="mglA"
                     /locus_tag="MOX77_001694"
                     /pseudo
     CDS             18455..19973
                     /gene="mglA"
                     /locus_tag="MOX77_001694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020883197.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/methyl galactoside ABC transporter
                     ATP-binding protein MglA"
     gene            19989..20999
                     /gene="mglC"
                     /locus_tag="MOX77_001695"
     CDS             19989..20999
                     /gene="mglC"
                     /locus_tag="MOX77_001695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/methyl galactoside ABC transporter
                     permease MglC"
                     /protein_id="HCA3357251.1"
                     /translation="MSALNKKSFLTWLKEGGIYVVLLVLLAIIIFQDPTFLSLLNLSN
                     ILTQSSVRIIIALGVAGLIVTQGTDLSAGRQVGLAAVVAATLLQSMENANKVFPEMAT
                     MPIALVILIVCAIGAVIGLVNGIIIAYLNVTPFITTLGTMIIVYGINSLYYDFVGASP
                     ISGFDSGFSTFAQGFVAMGSFRLSYITFYALIAVVFVWVLWNKTRFGKNIFAIGGNPE
                     AAKVSGVNVALNLLMIYALSGVFYAFGGLLEAGRIGSATNNLGFMYELDAIAACVVGG
                     VSFSGGVGTVFGVVTGVIIFTVINYGLTYIGVNPYWQYIIKGGIIIFAVALDSLKYAR
                     KK"
     gene            complement(21074..22308)
                     /gene="preA"
                     /locus_tag="MOX77_001696"
                     /pseudo
     CDS             complement(21074..22308)
                     /gene="preA"
                     /locus_tag="MOX77_001696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461132.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent dihydropyrimidine dehydrogenase
                     subunit PreA"
     gene            complement(22302..23543)
                     /locus_tag="MOX77_001697"
     CDS             complement(22302..23543)
                     /locus_tag="MOX77_001697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HCA3357252.1"
                     /translation="MPQQNYLDELTPGFTPLLAIKEASRCLLCHDAPCSQACPAQTDP
                     GKFIRSIYFRNFKGAAETIRENNALGAVCARVCPTEKLCQRGCTRSGIDKPIDIARLQ
                     RFITDFEQQTAMQIYQPGSKTRGKVAIIGAGPAGLQASVTLTHLGYDVTIYEKQPQPG
                     GWLRHGIPAFRLPQSVLDQEIARIVEMGVNIKCNCDVGGSLSLAQLKAEYRAVLMTVG
                     MSCGSDLPLFEQASHVEIAVDFLQRARQADGDISVPRSALIIGGGDVAMDVASTLKIL
                     GCPSVTCVAREELAEFPASEKEFTSTQALGVSIIDGFTPVAVSGNKVTFHHVRHSGEL
                     TLEAENIILAVGQHARLDNFAEIKAQHNIIDTHNYQTDDPAIFAAGDIVKGDKTVVYA
                     VKTGKEAAQAIHHYLEEACSC"
     gene            complement(23748..23993)
                     /locus_tag="MOX77_001698"
     CDS             complement(23748..23993)
                     /locus_tag="MOX77_001698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2542 family protein"
                     /protein_id="HCA3357253.1"
                     /translation="MIMDVQTIFVILAFLLLPLFCFREAWKGWRTGAVDKVVKNARKP
                     VYVYRHADPVQYWSYLFLYTGCGFLFTGMIIYLLFYR"
     gene            complement(23990..24709)
                     /gene="sanA"
                     /locus_tag="MOX77_001699"
     CDS             complement(23990..24709)
                     /gene="sanA"
                     /locus_tag="MOX77_001699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane permeability protein SanA"
                     /protein_id="HCA3357254.1"
                     /translation="MLKRVFYSLLVLVGLLLLTVLGLDRWMSWKTAPYIYDELQDLPY
                     RQVGVVLGTAKYYRKGVINQYYRYRIQGALNAYNSGKVNYLLLSGDNALQSYNEPMTM
                     RKDLIAAGVDPADIVLDYAGFRTLDSIVRTRKVFDINDFIIITQRFHCERALFIALHM
                     GIQAQCYAVPSPKNMLTVRLREFGARFSALADLYIFKREPRFLGPLVPIPTQHQVPND
                     AQGYPAVTPEQLLELEKKKGK"
     gene            complement(24886..25770)
                     /gene="cdd"
                     /locus_tag="MOX77_001700"
     CDS             complement(24886..25770)
                     /gene="cdd"
                     /locus_tag="MOX77_001700"
                     /EC_number="3.5.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine deaminase"
                     /protein_id="HCA3357255.1"
                     /translation="MHPRFQTAFAQLADNLQSALAPILADHHFPAMLTAEQVSTLKNT
                     AGLDEDALAFALLPLAAACARTDLSHFNVGAIARGVSGNWYFGANMEFLGATMQQTVH
                     AEQSAISHAWLRGEKGLAAVTVNYTPCGHCRQFMNELNSGLDLRIHLPGRAPHTLRDY
                     LPDAFGPKDLEIKTLLMDEQDHGFTLTGNTLTQAAITAANKSHMPYSHSPSGVALECK
                     DGRIFTGSYAENAAFNPTLPPLQGALNLLSLNGYDYADIQRAILAEKGDAALIQWDAT
                     AATLKALGCHNIDRVLLG"
     gene            complement(25924..26619)
                     /locus_tag="MOX77_001701"
     CDS             complement(25924..26619)
                     /locus_tag="MOX77_001701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CidB/LrgB family autolysis modulator"
                     /protein_id="HCA3357256.1"
                     /translation="MMTYIWWSLPLTLAVFFAARRLAAHFKMPLLNPLLVAMVVIIPF
                     LLLTGIPYEHYFKGSEVLNDLLQPAVVALAYPLYEQLHQIRARWKSIISICFVGSLVA
                     MITGTSVALLMGATPEIAASVLPKSVTTPIAMAVGGSIGGIPAISAVCVIFVGILGAV
                     FGHTLLNAMHIRTKAARGLAMGTASHALGTARCAELDYQEGAFSSLALVICGIITSLV
                     APFLFPLILAVMR"
     gene            complement(26616..27014)
                     /locus_tag="MOX77_001702"
     CDS             complement(26616..27014)
                     /locus_tag="MOX77_001702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CidA/LrgA family protein"
                     /protein_id="HCA3357257.1"
                     /translation="MSKSLNIIWQYIRAFVLIYACLYAGIFLASLLPITIPGSIIGML
                     ILFVLLALQILPAKWVNPGCYVLIRYMALLFVPIGVGVMQYFDLLRAQFGPVVVSCAI
                     STLVVFVVVSWSSHLIHGERKVVGQKGTKK"
     gene            complement(27146..28054)
                     /locus_tag="MOX77_001703"
     CDS             complement(27146..28054)
                     /locus_tag="MOX77_001703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCA3357258.1"
                     /translation="MANWAQKLKLHHLQTLVALGEQGNLTHVARMMNISQPALSKWLS
                     QLEDEIGITLFERHSKGLRPSEGGKLLLQHAQRLINDLERSQYEIARFKQGGLVGSLK
                     IGCSPVATDCVSQAILSLLNEMPTLHLNIEEKVMTPLLHDLLAGQVDVVVGRVGGRAL
                     QLPLNYQVLYTEPVCFVARPHHPLAARAQIAWSDLAHWRWIVWPTGTPIRISIDNALV
                     DNGVMLPENTIESASMNVSTNLLQSSDMISILSLRLAQRYASQGQLAILNLPKIEQKG
                     SVGMFWRKNETPSLALSRFLYFLAQV"
     gene            28180..>28378
                     /locus_tag="MOX77_001704"
     CDS             28180..>28378
                     /locus_tag="MOX77_001704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic acid/H+ symport family MFS transporter"
                     /protein_id="HCA3357259.1"
                     /translation="MTQRRDLQALIDAAPVGKMQWRVIICCFLVVMLDGFDTAAIGFI
                     APDIRTHWQLSASELAPLFGAG"
BASE COUNT         6811 a         7120 c         7641 g         6806 t
ORIGIN      
        1 cccgaccggc gtcgcccata cttttatggc ggctgaagcc attgaaacag aagcgaaaaa
       61 acgcggctgg tgggtaaaag tcgaaacgcg cggctccgtg ggggccggca atgccatcac
      121 cccggaagag gtggcggaag cggatttagt gattgtggcg gcggatatcg aagtggatct
      181 ggcgaagttt gccggtctcc cgatgtaccg cacgtcgacc ggcctggcgc tgaaaaagac
      241 ggcgcaggag ctggataaag ccgtagcgga agcgacgccg tatcaaccgg cgggtaaggc
      301 atcgcaagcg gcgaccgaag ggaagaaaga gagcgctggc gcataccggc atctgttgac
      361 gggcgtttct tacatgctgc ctatggtggt tgccggggga ctgtgtattg cgctttcctt
      421 cgcctttggt attgaagcct ttaaggtgcc ggacacgctg gcggcggcgc tgatgcagat
      481 tggcggcggt tcggcgtttg cgctgatggt gccggtactg gcgggttata tcgctttctc
      541 catcgcggat cgccctggcc ttacgccagg tctgattggc ggtatgctgg cggttagcac
      601 cggttccggt tttatcggcg ggatcattgc cggcttcctt gccgggtata tggcgaagct
      661 tatcagtacc aaactgaaac ttccgcaaag tatggaagcg ctgaagccaa tcctgatcat
      721 cccgttaatt tccagtctgg tggtggggct ggcgatgatt tacctgatcg gtaaaccggt
      781 tgccgggatt ctggaagggc tcacccactg gctgcaaacc atggggacgg caaacgcggt
      841 gctgttgggc gcgattctcg gcgggatgat gtgtaccgac atgggcggcc cggtgaacaa
      901 agcggcgtat gcgtttggcg ttggtctgct gagtacgcaa acttacgcgc cgatggcggc
      961 gatcatggcc gcaggtatgg taccgccgtt agcgctgggt ctggcgacga tggtggcgcg
     1021 tcgtaagttc gacaaagcgc agcaggaagg cggtaaagcg gcgttggtgc tggggctgtg
     1081 ctttatcact gaaggcgcta ttccgtttgc ggcgcgcgac ccgatgcgtg tactgccgtg
     1141 ctgtatcgtt ggcggcgcgt tgaccggggc tatttctatg gcggtaggcg caaaattgat
     1201 ggcgccgcat ggcggtctgt ttgttctgct tatcccaggc gcaattacgc cggtattggg
     1261 atacctgctg gcaattgtgg ccggtacgct ggtggcagga ctggcttatg ccgtcctgaa
     1321 acgtccggag acggaagtcg cggcaaaagc ggcataagag aaacacgcta aaaaaggcag
     1381 agcgcgctct gcctttttta ttgcctgaag aacattgagc gtcaggccat cgcttcggca
     1441 atttgctggg cttttaacca cgcaatctct tccgcccaga tatcaggatt gatggtctcc
     1501 agtatcagcg gaataccgtc aaaacgcgca tcctgcataa tccaacgaaa cgcatcgtgg
     1561 ccgatattgc cttcacccag actgtgatgg cggtcaacgc ggctaccgaa ggcgcttttg
     1621 gcgtcgttaa ggtgcattcc gcgcaaatac tgaaatccga caattttccc gaattcggcg
     1681 aacgtttttt cgcacgcctc tggcgtacgc agatcgtatc cagcggcaaa ggcatggcag
     1741 gtatcgatac agacgccaac gcgcgactta tcttccacgc cgtcgatgat ggcggctaac
     1801 tgttcaaact caaaccccag attactgccc tgaccggctg tattttcgat aaccgccgta
     1861 acgccctcgg tctgcgcgag ggcaatattg atagattccg cgatccgcgc caggcaatcc
     1921 tcctgtgcaa tctgcatcag atggctaccg ggatgaaaat taagcaaggt taagccgagt
     1981 tgttcacagc gctgcatttc atcgagaaag gcatcgcgtg atttttccag cgcttcactg
     2041 accggatggc ccagattaat caggtaacta tcgtggggaa ggatttgcgc cgccgagaaa
     2101 tgatactttt cacaggcgat tttaaagtca tcaatgacct ggggagtaag gggggcggca
     2161 cgccactgac gctggttttt tgtgaaaagc gcaaaggccg ttgcgccaat ttcagccgcg
     2221 cgggcagggg cgttagccag accgccagca gcgctgacgt gcgctccgat gtatttcata
     2281 aaagactcct gttaaacccg ctaacggttc attacgaacg ctatgataac gggttaacag
     2341 gcgtgaaacg taataattta tgcgataagg ctatggatta ggacgttaat ggcgccaccg
     2401 ccaataatca gccaggcgaa taatgccagc gccatcagca gcggtttcgc ccccgctttt
     2461 ttcaatgcgc taacgtgagt ggtcagaccc aacgccgcca ttgccatcgc cagcagtacc
     2521 gtgtccagcg tcaccagcat atccaccacg gctttcggca gcaggtggaa agagttgaag
     2581 atcgccacta cgatgaagaa aatagcaaac cacggaatgg taattttgct tttttccgcg
     2641 ccggtcgccg gggaaagctg tttaacgcgt gccgccagaa tgatcaggaa cggcgccagc
     2701 atcatgacac gcagcatctt agcgataact gccgcatttt ccgcatccgg gctaacggcg
     2761 tgacccgctg cgaccacttg cgcgacttca tgcatggttg agccgatata gatgccgtaa
     2821 gtttccgggc tgaaccagtg cgccagcagc ggatacattg ccgggtaaag gaaaatagcg
     2881 atggtgccga aaataacgac agtcgcgacg gctacagtaa ccttactggc ttccgctttt
     2941 accaccggtt ctgtcgccag taccgccgcc gcgccgcaga tactgctacc ggcgccaatc
     3001 agccagctgg tatgcctgtc cagaccaaag actttttggc ctaagaagca ggccagcatg
     3061 aacgtgctgg aaagcgttaa tacgtcaatc acaataccgc taatacccac gtcggcgatt
     3121 tgtgaaaagg taaggcggaa gccgtaaagg ataatcccta aacgcagtaa atgttgtttt
     3181 gcaaacagca cgccgccgtc gcattgtttc catatttgtg gatagacggt attcccgata
     3241 accataccca gcaggatagc cagggtcagg gcgctgaacc ccgcgcctgc aacagcaggg
     3301 atagcgccgc cccacagggc gactcctgta atgacggcgc tcagagcgag ccccggtata
     3361 aaatgccaca ttgtacgacg atgattctgc aaggtgagtt ctgtcataac cttctcctgt
     3421 atatggacaa taaggttacg gtgatctggt ttaaaaataa aattgattat atatttataa
     3481 ttaatcttta taagtggtaa gtgaaacgct atcggtggga tacgactatg catattacgc
     3541 tacgacaact tgaagtgttt gctgaagtac tgaaaagcgg ttcaacaacc caggcgtcgg
     3601 tcatgctgtc attatcgcag tccgccgtta gcgccgcgct caccgatctg gaaggtcagc
     3661 tcggcgtaca gttgtttgat cgggtgggga aacggctggt ggtcaacgaa catgggcgct
     3721 tgttataccc gcgcgcgctg gcattgctgg agcaagcggt agaaattgag cagctatttc
     3781 gtgaagataa cggcgcgata cgggtttatg ccagtagcac catcggcaat tacattttac
     3841 ccgccatgat tgcccgctat cgccagcatt atccggcctt gccgctggaa ctcagcgtgg
     3901 gaaacagcca ggacgtgatt aacgcggtgt tggattttcg ggttgatatc ggcctgattg
     3961 aagggccgtg tcacagtaca gagattatct ctgagccgtg gctggaagat gagctggtgg
     4021 tctttgccgc gccgtcctcg ccgctgacgc aggggccggt gacgctggaa cagcttgcgg
     4081 catccccatg gattttacgc gagcgcggtt ccggtacgcg ggaaattgtc gattatttgc
     4141 tgttgtcgca tttgccgcgc tttcatatgg cgatggagtt ggggaattca gaagcgatca
     4201 aacatgcggt gcgtcatgga ctggggataa gctgtttatc gcgccgggtg attgctgaac
     4261 aacttcaggc gggaaccctg ggcgaagtcg cggtgccgtt accgcgcctg gtgcgcacgt
     4321 tgtggcgtgt tcatcatcgg cagaaacatc tttctaacgc gttgcagcgt tttttgagtt
     4381 actgtgaata aaggtgaaga ggagggctgc ccgagcggca tcgccatttt tagtatccgc
     4441 ttacgtatac gttattctct gctttactta taatccgtgg ccggtcatga aggtctctta
     4501 taaccgcgca tttgtgtcgg aaggatagta tttcgtctgt tacaatcgcg cctcattttt
     4561 tggatggata gcattttcac atgggttcca aaactaaaac cacagaagcg cccgcgctac
     4621 gtcgcgaatt aaaggcgcgt cacctgacga tgattgccat tggcggctcc atcgggacag
     4681 gtcttttcgt tgcatctggt gcgacaattt ctctggcggg gccaggcggc gcgctgtttt
     4741 cttatattct gattggtttg atggtctact tcctgatgac cagtcttggc gagctggcgg
     4801 cctatatgcc ggtatctggc tcgtttgcga catatggtca gaactatgtg gaagaaggct
     4861 ttggtttcgc gctgggctgg aactactggt acaactgggc ggtgactatc gctgttgacc
     4921 tggttgccgc acaattggtg atgggctggt ggttcccgga cacgccgggc tggatctgga
     4981 gcgcgctatt cctctgcgtc attttcttgc tgaactacat ttctgtacgc ggttttggcg
     5041 aggcggagta ctggttctcg ttaattaaag tcgcgaccgt tattatcttc atcatcgttg
     5101 gcgtagcgat gattatcggc atctttaaag gtgtcgagcc ggtcggctgg agcaactgga
     5161 cgacgggcga tgcgcctttc gctggcggtt ttgcggcaat gattggcgtc gcgatgatcg
     5221 tgggcttctc tttccaggga actgagctga ttggtattgc cgccggggaa tctgaaaacc
     5281 cggagaagaa tattccgcgc gcggtgcgtc aggtgttctg gcgtattctg ctgttttatg
     5341 ttttcgcgat tttgattatc agcctgatca ttccttatac cgatccaaac ctgctgcgta
     5401 acgacgtcaa agacattagc gtcagtccgt ttaccttagt gttccagcat gcgggcttgt
     5461 tgtctgcggc ggcgataatg aatgcggtta tcctgacggc ggtactgtct gcgggtaact
     5521 ccgggatgta tgcctcgacc cgtatgctct acaccctggc ctgtgacggt aaggccccgc
     5581 gtatttttgc gaaattgtcc cgcggcggcg taccgcgcaa tgcgctttat gccaccaccg
     5641 tgattgccgg tctttgcttt ttgacctcaa tgttcggcaa ccagacggtc tatctgtggc
     5701 tgttgaacac ctccggtatg acgggcttca tcgcctggct ggggattgcc attagccatt
     5761 atcgcttccg tcgcggttac gtgttacaag ggtatgatgt gaatgatttg ccgtaccgtt
     5821 ccgggttctt cccgctgggg ccgattttcg cctttgtact gtgcctgatt attacgttgg
     5881 ggcagaacta tgaagcgttc ctgaaagata ccatcgactg gggcggcgtc gcggcgacct
     5941 atatcggtat tccgctgttc ctgcttatct ggttcggcta caagctgata aaaggcacgc
     6001 atttcgtgcg ctatagcgaa atgcacttcc cggaacgcgt taaaaagtaa cgtaatattc
     6061 tcgtcatagg ccggataagg ctttatgccg ccatccggca cggactgcct gaacctgacc
     6121 cttctaaccc tctcattcga gagggttttt tgttttttct ttatgattgg ttcaaatgac
     6181 ataattatta acaattaaat tgataattat tatcgtttac tttatcgtta cgctcgaaat
     6241 cagaaaggat gaagattcgg gcgcgaccgt cactcatgag cccgactcgc ctgcataaaa
     6301 agagttcgcc gtgataaccg ttatcgcagg cgaaacgtaa tgcgttgtga gcgataaccg
     6361 atttttttgt cgtatttacc tcatggagaa atggaatgtt taggtttaac cctttcgttc
     6421 gggtagggct ttgtatgtcc gcagttacgt tggcctggcc ggttgccgcg gcaacggatg
     6481 atggtgaaac catggtcgtt accgcgtccg ccatcgaaca aaatctgaaa gatgcgccag
     6541 caagtatcag cgtcattacc cagcaagatt tacagcgcag gcccgtgcaa aacctgaaag
     6601 atgtcctgaa agaggtgccg ggcgtacagc tcactaacga aggggataac cgtaaaggcg
     6661 tgagtattcg tggtctggac agcagttata cgctgatcct gatcgacggt aagcgcgtta
     6721 actcccgtaa cgcggtcttc cgccataatg attttgatct gaactggata ccggttgacg
     6781 ctatcgaacg cattgaagtg gtgcgtggcc ccatgtcctc gctgtatggc tccgatgcgc
     6841 tgggcggcgt ggtcaacatt atcaccaaaa aaattggtca gaaatggcac ggcagcgtca
     6901 cggttgactc cactattcag gaacatcgcg accgtggcga tacctataac ggtcagttct
     6961 ttaccagcgg tccgctgatc gacggcgtgc tgggaatgaa agcctacggt agcctggcga
     7021 aacgcgaaaa agacgagcag cagagttccg ccaccaccgc tacgggtgaa acgccgcgca
     7081 ttgaaggatt taccagccgg gatggaaacg tcgagtttgc ctggacacca aacgaaaatc
     7141 atgacgttac cgcaggctac ggttttgatc gccaggaccg ggactccgac tcgctggata
     7201 aaaaccgact ggaacggcaa aactacgcgt tgagccataa cggacgttgg gatctcggca
     7261 atagcgagct caagttctac ggcgaaaagg tggaaaacaa aaaccccggc aacagtagcc
     7321 ctatcacgtc agaaagcaat tcgattgacg ggaaatacgt tctgccgtta gcgtctgtca
     7381 accagttcct caccttcggc ggcgaatggc gtcacgataa actgagtgat gcggtgagcc
     7441 tgaccggcgg ttccagtact aaaacctccg ccagccagta cgctctgttc cttgaagatg
     7501 agtggcgcat cttcgaaccg ctggcgctga ccaccggtat tcgtatggat gaccatgaaa
     7561 cctatggcga tcactggagc ccgcgtgctt atctggtcta taacgcaacg gataccctga
     7621 cggtgaaagg tgggtgggcc acggccttta aagcgccgtc gctattgcaa ttaagtccgg
     7681 actgggcgac caactcctgc cgtggcggat gccgcattgt cggtagcccg gatctgaaac
     7741 ctgaaactag tgaaagctgg gagctcggcc tttattaccg gggcgaagaa ggcatactgg
     7801 agggcgtgga agcgagcgtt accacgttcc gtaacgatgt ggacaatcgc atcagcatta
     7861 gccgtacccc tgacgttaac gccgcgcccg gctattccaa ctttgtcggc ttcgaaacca
     7921 acagtcgggg acagcgcgtt ccggtcttcc gttattacaa cgtgaataaa gcacgtattc
     7981 agggtgtgga aaccgagttg aaagttccgt ttaacgaggc gtggaaactg tcgttgaatt
     8041 acacctataa cgacggacgc gatgtcagta atggcgggaa caagccgctt tccgatctgc
     8101 cgttccacac cgcgaacggt acgcttgact ggaaaccggc gcagcttgaa gactggtcat
     8161 tctacgtatc agggaattat accggacgta agcgggccga cagcgcaacg gcgaaaacgc
     8221 cgggcgggta cgtggtctgg gataccggcg cggcatggca ggcgacgaaa aacgttaaac
     8281 tgcgtgcggg cgttctgaac gtgggcgata aagatctcaa acgcgacgac tacggttata
     8341 ccgaagacgg acgtcgttac tttatggcgg tggattaccg tttctgacag agactggcga
     8401 cagccgcgtt ttgccgctgt cgccagaatg ttataaccga tgcagcctgg agagcagcgc
     8461 cagcgacaga gtcgttagca gaatggcgat taacgcatag atataaacgc ccgaccacgc
     8521 ccagctattt ttcaccataa ttaccggcac accggccatt gccgcgccga catagctgaa
     8581 caatccccga aagccggtaa tcgatcccgc cgcatcctta tgggtcacat ccagacagcc
     8641 gacggcaaaa agcatatgcg gtccgtataa ggcgaagccc atgatggtga acagaatcgc
     8701 gctgagggtg taagaggtat cctgaaccag cggcaccagc acgatgcata tgcacagcgc
     8761 taacgcgaag attaacccgg tcatccagcg gttacttttg aacataaagt cagacaagta
     8821 gcctgccagc aacccacctg ccagtccgcc cgcctcaaat caggaaataa tcgagttcgc
     8881 ttttatcaga ctccagccgt gaacctgcga atagtaaatc tgcggccagt cgttaagaat
     8941 agtgcgcgca atataaaccg acatatcacc gataataatg atccatacca gtggattggt
     9001 caggatatat ttcacaaaaa tctgccagaa gctcaggttg accgggctgg ccttgacctg
     9061 ggccagttcc gtcgggtcgt tacgccactg ccccacgttg ggcaaaccta acgtaccggg
     9121 acgatcttta atggtaaata gcgccactat ccccatcagc agcgaaatgg cgccgggaac
     9181 ataaaatccc attttccagc taccgctaaa ggcgatagca aaactggtca gcagcggcgc
     9241 gaggctgccg ccgatattgt gcgccgcttc aacgatagcc caccagcgtc cccgttcgtt
     9301 tttcgaaaac cacgaggcca taattttcgc catcggcgga aagctggtgc cctgtaatat
     9361 cgcgttgaga ctgtacagca cgtagaatgc cgccacgctg tcggaaaagc cgaacagaat
     9421 atttacaatc cccacgccaa tcagcaccgg gccggtcatg gctttcgggt taattttatc
     9481 gaccagcatc ccgccgacaa acttcatcgc gccataaaga atgtaaaaaa tagaagacat
     9541 aatggcgaag tcttctgcgg tcagcgacgt ttccgtcagc atggccggca tcgcggcgga
     9601 gaagttttta cgggtaagat aaaagacggc ataagagata aagaccgagg cgataatctc
     9661 aaaacgaaat tttttatagg tctggtctat ctcttttttc tcttttacaa tcggcttatc
     9721 gggctggctg aaaataaatg tttttatact cattttaaaa ttcccttccg gcgaggtgag
     9781 tcgcgttata attcatcttc aataagaaaa agaagcaatt cgaaaccgtg ataattaatc
     9841 tgatggtgga ttttttcccg tacaaccggc ttcgctttcc aggcaatacc ggtgccagca
     9901 tgttctaaca tcggcagatc gttggcgcca tcaccgcagg caataatatt ctccgtggca
     9961 atatttaacc gggcagccag gtcaaccagc gtctgttttt tgtttgcggc gttcataatc
    10021 ggcaaggtaa tgttatccgt cagaacgtta tcgcgtattt caaccgtatt cgaaaaggca
    10081 taatccagtt gataccgcgc ttttagacgc tgggtgaata tatccagtcc cccggagata
    10141 atcgcggttt taaatccttt ggccttgatg actggcagaa tagttaacag gcctggcgaa
    10201 agggtcatgc gatcgcatac ggcgttcagc actgctttcg gtgtgccttt caacattccg
    10261 atacgtcggg taaaactggc gttaaaatca agcttgccct ccatcgcctg ttgggtaatg
    10321 gcggtgattt gcgtcgacat gccaagctcg cgggcaattt catccacgcc ttcttccgca
    10381 ataaatgtcg agtccatatc aaacgcgata ataccgttag caggcagtgg ctgcggctta
    10441 ataaaaaaat caaactgcca ttgcaatgag agttcgcgta aatagcgata aaattcaggc
    10501 gtcagacatt ccgctggcag cgtaagcttt aaataagcgg tattgataag cgcggcataa
    10561 cgtttatcaa ataatagcgg aaacggcatg gtgacggcat taaataacgt ttcctgtaat
    10621 tttttctgaa acgtatcgat atcctgtgta gtaataaaat aaataatgct catatgataa
    10681 ctcccttaat ttacgggtat tataatggct cttttgcggc gtggaatctc gtgctatcac
    10741 agatatcaca gccagaaaag ggctaaaaaa gcgttgtttt tgataccagg taaagttcag
    10801 acacaaaagg tatcactttt gatatgccaa ctgtgcgagg atgttattta ttactgaacg
    10861 cgaatgagac tgaaaggatt gatataacga tggagagttg ccttgatata ttcaaaatag
    10921 taataggtcc atccagctca cgtaccgtag ggccgatgcg cgccgcctgt cactttattt
    10981 cattgctcag agaacaagag acgttgccgc taattcggga aattgaaatc gagctgtatg
    11041 gcgcgttatc gttaagccgc aagtgccaca atgtggatac cgccctgtat cttgggctgc
    11101 tgggttgcca gccggagaat gtcgatctcc gttcgcatat ggcggtgatt aagcgtgcgg
    11161 aaaatgaaaa caaaatcgaa ctcccgctct ctgacgcggg cggaatcacg ataaaagtca
    11221 agattatcgc caatcaccag gcgcatccag gccatcctta tgccatgacg ttttgcgcca
    11281 gggatgatta ttttacggtg tatgaagaga cctggttttc taccggcgcc gggcaggttc
    11341 gtaaacatgg cgagccgctg acgccatcgc ttcctttgcg tacagtgtcg ccctttgaat
    11401 ttagtcatgc cgcgcagttg ctggcgctgt gtcggcgtaa cggcctgtcc gtggcggcgc
    11461 tgatgatgaa aaatgagctg tgccgccact cgccacagac gttgcagaat tatctggcgc
    11521 aaatatggga cgtgatgcag caggcggttt atcgcggcct gcatactgag ggggtattac
    11581 ccggtcccta tcaggtaccg cggcgcgcct gtgcgttaca taagacgtta caggctaacc
    11641 gctccgccag cgatttttta accgcgctga actgggtcaa tgccttcgcg attgcggtaa
    11701 gcgaagaaaa tgccagcggc ggacagattg ttaccgcgcc aaccaatggc gcgtgcggca
    11761 tcattccggc agcgctctgc tggtatgata aatttgtcac gccgctggag cccggtgctc
    11821 tgacccgttt cttcctgacc gccgccgcta tcgcgatgct gtttaaacaa aacgcctcta
    11881 ttctgggatc tgaagttggc tgtcaggggg aaatcggcgt ggcgtgctca atggcggcgg
    11941 cgggcctggc tgaactgatg ggtgcatccg tggagcaaac gctgagcgcc gctgaaattg
    12001 ccatggaaca tcatctggga ttgacctgcg atccgctggg cgggcaggta caaattccct
    12061 gcatagagag aaatgccatc tctgccgtga aagcgataaa cgcggcgacg atggcgatga
    12121 gtcgcgtaag cgaaccctgt atttcgctcg atgagatcat tgctgcgatg tacgagaccg
    12181 gtaaagacat gagcgctaaa taccgtgaaa cgtatcatgg ttcgctgggg aaaattcagc
    12241 cgcgcaagag agggtaacag cgtgaaatac aatacgatga ataacgatga gattatcctg
    12301 tcgttgtgcg cccgcttaaa ggagacgcgt ctgtctcttg cgatgaccca gcagcagctt
    12361 gccgatcgcg cgcacgttgg cattgccacc atcaagcgta tcgagaaggg gggagggctc
    12421 aatcttgata cgctaatttc tctcctgcgg gcgctggata agttgcataa tcttgatgcg
    12481 gtgctgtttg aatccgaact gcgtaatttt cacgaaagtt atgaaggcgg agagggcagc
    12541 ggccgccttc aggtacgcca gcaggccgcg gatttaaata ataaatcttc cgcgccgcag
    12601 tcggaggagg tgaactacag cgcggcgctg gaaaattcat tatgttggtg acgtctcatg
    12661 ctcgtcccgt aaataccggg catgaaagcg cagatggtcc tcaatgaagg acgcaataaa
    12721 ataatagcta tgatcgtaac cgggctggat tcgtagcgtc atcggccagg cggtttgccg
    12781 cgcggcttcc gccagtacgg cgggctgaag ctgatcggcg aggaattgat cgctgtcacc
    12841 ctgatcgatg agcacaggaa tggcgtcctg cggctggctg gccagcatta attcgcagct
    12901 atcccactca gtccaggctg attcatcttc gccgagataa gcggtaagcg ctttgattcc
    12961 ccacggcacg cggctggggt tgacgatggg cgcaaaagca gagatgctgg tgtatttgcc
    13021 cggatttttc agcgccatga ttaacgcgcc gtggccgccc atcgagtgcc cgctgatggc
    13081 gcaacggtcg ctgacgttaa actgtgtctg gataagcgcc ggaagctcat cgcgcaggta
    13141 atcgtacatg cgataatggc tggcccaggg cggctgtgtg gcattgagat aaaacccggc
    13201 gccgtggcct aaatcgtatc cgctatcgtc ggcgacctgt tcaccgcgtg gactggtatc
    13261 cggcatcacc aatacaatgc ccagttctgc tgcgatacgc tgcgcgcctg ctttggtggt
    13321 aaaattctca tcattgcagg tcaacccgga caaccagtac agtaccggag gcggttcatt
    13381 atcctgagtc ggcggaagaa aaatgctgaa tgtcatggcg cagtttagcg tggcggcatg
    13441 atgacgccag cgctgctgcc agccgccaaa acatcggtgc tcttcgagca tttccatgcg
    13501 ggggctcctt ttatagtgaa cctgataagg tatgcagatt cttcataata cagattattc
    13561 accgcgttgt gagtaacttt cacttccgta atacataaac atgcttcatc atttaaataa
    13621 cgttgcgtta acaaatatgc cctttgtcct gccagcattc tcgcaccgga aaagatgtca
    13681 tgaaaggcag cgacaatttc aacaattatg ggcgtgaata ctggattatg tgcgctacct
    13741 cacgcacaat aatcacactg tcacaatatt gacaaacttt gccccatgca gggcagaggc
    13801 gccacacctg caggagaaca cgattaatgc catcactcag taaagaagcg gccctggttc
    13861 atgacgcgct ggttgcccgg gggctggaaa cgccgctgcg cccgcctatg gatgaactgg
    13921 ataatgaaac gcgaaaaagc cttatcgcag ggcatatgac tgagattatg cagttgctga
    13981 atctcgattt gagcgatgac agtctgatgg aaacgccgca tcgtatcgct aagatgtacg
    14041 ttgacgagat ttttgctggc ctcgactatg ctaatttccc gaaaattacc ctcattgaaa
    14101 ataaaatgaa ggtggatgaa atggtcaccg tccgcgatat cacgctgacc agcacctgtg
    14161 aacatcactt cgtgaccatt gatggcaaag cgaccgtcgc gtatatcccc aaagattccg
    14221 tgatcggcct gtcgaaaatt aaccgcatcg tgcaattctt cgcccagcgt ccgcaggttc
    14281 aggaacgttt gacccaacaa attctgacgg cgctgcaaac cttgctcggc accaataatg
    14341 tagcggtatc gattgatgcg gtgcattact gcgtgaaagc gcgcggtatt cgtgacgcaa
    14401 ccagcgccac gacgacgacg tcgctgggcg gattgtttaa gtccagccag aatacgcgcc
    14461 aggagtttct gcgtgccgtt cgccatcatc catgattaag gcggagacga tggagcgtaa
    14521 tgtcacgctg gattttgtac gtggcgtcgc tatcctcggt atcctgcttc ttaacattag
    14581 cgcctttgga ttgccgaagg cggcttatct caatcccgcc tggtacggcg cgatcgttcc
    14641 cgaagacgcc tggtcctggg cgattctcga tattgtggcg caggctaagt ttcttacgct
    14701 gttcgcgttg ttgtttggcg cggggctaca aatgctgctt ccgcgtggta aacagtggat
    14761 tcagtcgcgc ttaacgctat tggtactgtt aggttttatc catgcgttat tcttttggga
    14821 cggcgacatt ctgctggcct acggtctggt cggattaatt tgctggcgac tggtacgcga
    14881 cgcgccttcg gtaaaaagcc tgttcaatac cggcatactc ctttatctgg tcgggattgg
    14941 cgtactactg ctgctgggtg tggtatcgag tagcgaaacc agccgcgcct ggacgccgga
    15001 tgcgtcggca atattgtatg aaaaatactg gaagctgaac ggcggcatgg aggctatcag
    15061 caaccgggca gagatgctgt caaatagttt actggcgctc ggcgcgcagt atggctggca
    15121 actggcaggt atgatactgc tgggcgccgc gctaatgcgt agcggctggc tgaaaggcca
    15181 gtacagtctg cggcactatc gccgtaccgg ggttctgctg gtggcgttag ggctaatgat
    15241 caacctgcct gcggtcattt tacaatggcg gctggactgg gcgtaccgct ggtgcgcctt
    15301 cttattgcag gcgccgcgcg aactgagcgc gccgttgcaa acgctgggct atgccgcgct
    15361 gatgtttggc ttctggccgc agcttagccg atgcagactg acgcttgcca ttgcctgcgt
    15421 agggcgaatg gcgctgacca attatttgct gcagacgatc atctgtacca cgctgtttta
    15481 tcagtttggc ttatttatga aattcaatcg actggaactc ttgttctttg tcgttccggt
    15541 atgggcaata aaccttctct tttccgtcat ctggctacgt ttctggcgac agggaccggt
    15601 cgagtggtta tggcgtcaac tcacgttgcg cgcgtcagga tcgctcagat aacgatctgg
    15661 atcacattca ttaacaaaat ggctgtaacc gtttccatcc ctgtgatgtt tctcacgcag
    15721 ccctgggcag ggtgctgaca aaatagccgc ctgctaacgg ggcatttgtg agcatttttg
    15781 aactcaaaca gggcagtgaa tatgatcacc attcgtgatg tagcgcgcca ggctggcgtg
    15841 tctgtagcga ccgtttcccg cgtactgaat aacagcgcgt tggtcagtcc cgacacccgt
    15901 gacgccgtta tgcaggccgt caccctgctg ggatatcggc caaatgcgaa tgcgcaagcg
    15961 ctggccactc aggtgagcga taccatcggc gtcgtagtca tggatgtttc cgatgccttt
    16021 ttcggcgctc tggtgaaagc cgtagatctg gtcgcgcagc agcaccagaa atatgttctc
    16081 attggcaaca gttatcatga ggcggaaaaa gagcgccatg cgattgaagt cttgatccgt
    16141 cagcgttgta acgcattgat tgttcactca aaagccttaa ccgatcgcga gctgagcgac
    16201 tttatggatc agatccccgg tatggtgctg attaaccgta tcgtgccggg ttatgcgcat
    16261 cgttgtgtct gtctcgacaa tgtgagcggc gccagaatgg cgacccgaat gttgctgaat
    16321 aatggacatc aacgcatcgg ctacctggcc ttcagccacc gtattgaaga tgacgcgatg
    16381 cgcagagaag ggtggttaca cgcgctgcaa gagcaggggg ttgctgcgtc ggagagctgg
    16441 attggcaccg gcacgccgga tatgcagggc ggcgagtcgg caatggttga gttgctggga
    16501 cgcaatctgc aactgacggc ggtatttgcc tataacgata acatggcgtc gggcgcgctg
    16561 acggcgttaa aagataacgg catcgccatt cccttgcatc tgtctgtcat cggtttcgat
    16621 gatatcccta ttgctcgtta taccgatcct cagttgacta ccgtgcgcta tcctattgct
    16681 tctatggcga aaatcgcgac cgagctggcg ttacaggggg ccgcaggcac gctggatatc
    16741 acggcgacgc actgcttcat gccgacgctg gtacggcgcc attcggtggc gtggcgacag
    16801 aatgcggtac tgatcactaa ctgattacgc cccgcatgta accgttttca atctgtgagt
    16861 aaattcacag tttattaaca ttgtgatagc tatgatgaca acgtttgtcg cactgtaact
    16921 aatgtgtaac agttagttgt tagttttgct ggggtatttc gcttataaaa accattatca
    16981 caatatcccg cgactaccgg acaaaaataa agagttgaat aagagcttat cccattaggg
    17041 ctattttact tgccattttg gacctgggca gtgctcgcca aaacgcgtta gcgttttgaa
    17101 cgccgctagc agcggcccga agggcgagcg tagcgagtca aacctcacgt actacgtgta
    17161 cgctccggtt tttgcgcgct gtccgtgtcc aaactggctg cgccaataac gcctggtggg
    17221 ataggctcta aatacgcttc ggcgttcagt aacatgcgtt aacgtgctga acagccgggc
    17281 atttttttac gctataccct acataataaa accggagcta ccatgaataa gaaggtactg
    17341 accctttctg ccgtgatggc aagtctgtta ttcggcgcgc acgcacacgc ggctgatact
    17401 cgtattggcg tgacgattta taaatatgac gataacttta tgtccgtggt gcgtaaggtt
    17461 attgaaaaag atggcaaatc cgcgccggat gttcagctac tgatgaatga ctcgcaaaac
    17521 gatcaatcta aacagaatga tcaaattgac gttttattgg cgaaaggggt taaagctctg
    17581 gcgattaacc tggtcgaccc ggcagccgcc ggtacggtga ttgagaaagc gcgcgggcaa
    17641 aatgtgccgg tggtgttctt taacaaagag ccttcccgca aagcgctgga cagctatgac
    17701 aaggcgtatt atgtcgggac tgactctaaa gaatccggtg tgattcaggg cgacttgatt
    17761 gccaaacact ggcaggcgaa tcagggttgg gatctgaata aagacggtaa aattcagtat
    17821 gttctgctga aaggcgagcc ggggcacccg gatgctgaag cccgtacgac gtatgtggtg
    17881 aaagagttaa atgataaagg tattcagacc gagcaactgg cgttagacac cgctgtgtgg
    17941 gataccgcgc aggcaaaaga taagatggat gcctggctgt ctggcccgaa cgctaacaag
    18001 attgaggtgg ttatcgcgaa taacgatgcg atggcgatgg gcgcggtaga ggcgctgaaa
    18061 gcgcataata aatcgtcgat tccggtcttt ggcgtcgatg cgttaccgga agctttggcg
    18121 ctggtgaaat cgggcgcgat ggccggtacg gtactgaatg acgccaacaa tcaggcgaaa
    18181 gcgacattcg atctggcgaa aaacctcgcc gaaggcaagg gcgcggctga cggcaccagc
    18241 tggaagattg agaacaaaat cgtgcgcgtg ccttatgtcg gcgtggacaa agacaatctg
    18301 agcgaattta cccaaaaata acttttccgt ctgtgggcgc aattttgttg cgccctgaaa
    18361 ccgtggaagg gtgacgtgcc gcagaccgga taacgtattt cttttgccat ccggcgcgga
    18421 tagtcataat taaaaaggcc gacagggtat cattatgggc agcacgatct ctccgtcgtc
    18481 gggtgaatat ttgttggaaa tgcgtggcat taacaaatca tttcccggcg tgaaagcgct
    18541 tgataatgtc aacttaaacg ttcgtccgca ctctattcat gcattaatgg gcgaaaacgg
    18601 cgcaggcaaa tcaacattat taaaatgtct tttcggtatt tatcaaaaag actccggcag
    18661 cattgtattt cagggaaaag aagtggactt ccattcggcg aaagaagcgc tggagaatgg
    18721 gatttcgatg gtacaccagg agttaaacct ggtattacaa cgttcggtca tggataacat
    18781 gtggctgggg cgttatccca ccaaaggtat gtttgtcgac caggataaaa tgtaccagga
    18841 taccaaagcg atatttgatg agctggatat cgatattgac ccgcgcgcgc gtgggaacgt
    18901 tatccgtttc gcaaatgcag atgattgaaa ttgcgaaggc gttttcctat aacgctaaga
    18961 tcgttattat ggatgaaccg acctcatcgt taactgagaa agaggttaat catctgttca
    19021 ccattattcg caagctgaaa gaacgcggct gcggcattgt ttatatctcg cataaaatgg
    19081 aagaaatttt tcaattgtgc gatgaaatta ctatcttgcg cgacggtcag tggattgcca
    19141 cccagccgct ggaagggctg gatatggata agatcattgc gatgatggtc gggcgttccc
    19201 tgaaccagcg ctttccggat aaagaaaata agccgggcga cgtgattctg gaggttcgtc
    19261 acctgacctc gctgcgccag ccttccattc gcgatgtctc ctttgatttg cacaagggcg
    19321 aaattctggg cattgccggt ctggttgggg caaagcgtac cgatatcgtc gaaacgctgt
    19381 ttggcattcg tgagaagtcg tccgggacaa tcactttaca tggcaagaaa attaataatc
    19441 acactgcgaa cgaagcgatt aaccacggtt ttgcgctggt gacggaagag cgtcgttcca
    19501 ccggaattta cgcctatctg gatatcggat ttaactcatt aatttcgaat atccgtaatt
    19561 ataaaaataa agtggggtta ctggataatt cccggatgaa aagcgacacc caatgggtca
    19621 ttgattccat gcgggtaaaa acgccggggc atcgcgcgca aattggttca ctttccggcg
    19681 gcaatcagca aaaggtgatc attggtcgct ggctattaac gcagccggaa atattaatgc
    19741 tggacgaacc gacccgcggc attgatgtcg gcgcaaaatt tgaaatttat cagcttattg
    19801 cggaactggc gaaaaaaggc aaggggatca tcattatatc ttctgaaatg ccggagctgt
    19861 tagggattac cgatcgtatc ctggtgatga gtaacggtct cgtttccggc attgtcgata
    19921 ctaaaacaac aacgcaaaac gaaattttgc gtcttgcttc tttgcacctt taagatcagg
    19981 ggctccttat gagtgcgtta aacaagaaaa gctttttgac ctggctgaaa gagggcggaa
    20041 tttacgtcgt tcttttagtg ctgctggcga ttattatttt ccaggacccg acttttttaa
    20101 gtttgctgaa tttaagtaat attctgacgc aatcttcggt acgtattatt atcgcgctgg
    20161 gcgtggcggg actcatcgtc acccagggga cagacctgtc ggcggggcgt caggtagggc
    20221 tggcggcggt tgtggcggca acattactgc aatcaatgga aaacgccaac aaagtgtttc
    20281 cggaaatggc gaccatgccg attgcgctgg tcatcctgat tgtctgcgcg attggcgcgg
    20341 tgattggcct ggtgaacggc atcatcattg cttacctgaa cgtgacgccg tttattacca
    20401 cgcttggcac gatgattatc gtttatggaa tcaactccct ttactatgac tttgtcggcg
    20461 cttcgcccat ttccggcttt gacagcggct tttccacctt tgcgcagggc tttgtggcga
    20521 tgggcagttt ccggctctcc tacatcacct tttacgctct gattgcggta gtgtttgtct
    20581 gggtgctgtg gaataagacc cgctttggta aaaacatttt tgctattggc ggcaacccgg
    20641 aagcggcgaa agtttctggc gtaaacgtgg cgctgaacct gctgatgatt tatgcgctct
    20701 ccggcgtgtt ttatgccttc ggcggcttac tggaagcagg gcgtattggt tctgccacca
    20761 acaacctcgg ctttatgtat gaactggatg cgattgccgc gtgcgtggtc gggggcgtat
    20821 cgtttagcgg cggagtgggg acggtcttcg gcgtggtgac cggcgtcatt atctttaccg
    20881 tcatcaacta tggcctgacc tatatcgggg taaacccgta ctggcagtac attatcaaag
    20941 gcggcattat cattttcgcc gtggcgctgg actcgctgaa atacgcgcgt aagaagtagt
    21001 tatccagacg tattaccttg cttatcagat aacccggcgc agcgaaactg cgcgccgggc
    21061 ttcataccgt gagctacagc gttaacgcgt gttctttttc gcctttttta aatttgacct
    21121 cgcctaaatc aatacaggcg accgggcaga catgaccgca cagcagacaa ccgacgcatt
    21181 tttccgtatt gcaatgcggc gtgtggctgt gttcatccca ctccatcgcc tgatgaccgc
    21241 cgtcatagca ggagatatag caacgtccgc agccgacgca tttctcctga ttaatccgcg
    21301 gatagacgat atagctgcga tccaggtctt ccgccgggat aatattgcca ttcgccagcc
    21361 cgatcatctc ctgtaatgag gcaaatccct gatcggccag atagtggctg aggccgctcg
    21421 ccatatcttc tacaatgcgg taaccgtatt gcataatgcc tgtcgtcacc tgtagggtcg
    21481 ccgcgcccag cagcagaaat tcggcagcgt cttcccaggt ttcaatgccg ccgataccgc
    21541 taatcgggaa atcgcgcagt tcagggtgca ttcgcaactg ctggataaaa cgcagcgcaa
    21601 tgggtttcac cgcttttcct gaataaccgg agatgctgga tttaccgtta accaccggca
    21661 tcccgatttt gcggttcagg tcgatgttag taatggattt cacggtgttg atggtggcga
    21721 taccgtcggc cccgccgcgt ttggcggcca gcgcgacttc acacatatcg ccaatattcg
    21781 gcgtcatttt cgccagcatt ggcaaagatg aaccgcgttt tacggcgcgg cagtattttt
    21841 caaccagttc cgggctttgc cctacatcgc ttcccatggc gtgcgaggtc atctgcgggc
    21901 aagagaagtt acactcaatc atatccgcgc cggcttcttc aaccagacgc gccagttcct
    21961 gccactgctg ctcattttcc cccatgatgg aagcaatcag caccttatcc ggataatcct
    22021 gttttagccg tcgaatggcg gccagattct cttccagcgg atgctcagca atttgctcca
    22081 tgtttttgaa accaataaaa ccggtatctt ctttcgtcag gtggtcaaaa cgtggagaga
    22141 cttcgttggc aataaaaaac caatggtttt aaaaacgatc ccgccccagc cggtatcata
    22201 ggctttggcg cacatctcat aacaattgcc taccggagaa gaagaaaggc aaaacggatt
    22261 gggaaactta acgccgcaaa aggtaacaga caaatctttt gttaacatga gcaggcctcc
    22321 tctaaataat gatgaatagc ctgagcggct tcttttccgg tttttaccgc ataaacgacg
    22381 gtcttatcac ctttaacaat atcgccagcg gcaaagatcg ccgggtcgtc ggtttgataa
    22441 ttgtgcgtgt cgataatatt atgctgcgct tttatctccg caaagttatc cagtcgcgcg
    22501 tgctgcccca cggccaaaat aatattttcc gcttccagcg tcagttctcc tgagtggcgt
    22561 acatggtgga aggtcacttt atttccgctg acggcgacag gcgtaaaacc atcaataatc
    22621 gatacgccta atgcctgcgt gctggtaaat tctttttcgc tggcggggaa ttcggctaat
    22681 tcttcccgcg ccacgcaggt gacggaagga cagccgagaa tttttaacgt actggcgaca
    22741 tccatcgcta cgtcgccgcc gccaataatt aatgcgctac gcggaacgct aatatcgccg
    22801 tcggcctgac gggcgcgctg taaaaaatca acggcaatct ctacgtgact ggcttgctca
    22861 aataacggta aatcagagcc acaggacatc ccgacggtca tcagcacggc gcgatattcg
    22921 gctttgagtt gcgcaagcga tagcgacccg cccacgtcac aattacattt aatattgacg
    22981 cccatttcta caatgcgggc aatttcctga tcgagtacgc tttgcggcag acgaaatgcc
    23041 gggatgccgt gacgcagcca tccgccgggc tgcggctgtt tttcgtaaat ggtgacgtca
    23101 tagcctaaat gtgtgagcgt cacgcttgcc tgcaaacctg ccggacccgc gccaataatc
    23161 gcgactttcc cgcgtgtttt actcccgggc tgataaatct gcatggcagt ctgctgttca
    23221 aaatcggtaa taaaacgttg caggcgtgca atatcaatag gtttatctat tccggaacgt
    23281 gtacatccgc gctggcataa tttttccgtc ggacagactc tggcgcagac ggcgccaagc
    23341 gcattatttt cccggatagt ttccgctgcg cctttaaaat tgcgaaagta aatagaacga
    23401 ataaatttcc ccggatcggt ttgcgccggg caagcctgac tacagggcgc atcgtgacat
    23461 aataaacaac gggaagcctc ttttattgcc agtaatggcg taaaaccagg cgtgagttca
    23521 tccagataat tttgttgcgg catataatct tccttaatgc ttgaataaat taaggcgaaa
    23581 cgcaaataac gcgttttaat gatctaaaat ctaccgccag cctaagcatt gaaagaaggg
    23641 cattctgtga aagaattcac aaaaaaatga aaccagaatg caaaacagca tttgttcctt
    23701 atatcataat aataactatt ctcaatttta aagggataat aaatagatta acgataaaaa
    23761 agaagataaa taatcattcc agtaaataaa aaaccgcaac cggtataaag aaaaagataa
    23821 gaccaatatt gtacgggatc ggcatggcga taaacataaa ccggttttcg cgcatttttg
    23881 acaactttat ctaccgcgcc ggttcgccag cctttccagg cctcacgaaa gcaaaaaagc
    23941 gggagtagca gaaaggctaa tatgacaaat atcgtctgta catccatgat catttccctt
    24001 ttttcttttc cagttcaagc aattgttccg gcgtaacggc cggatacccc tgggcgtcat
    24061 ttggcacctg atgctgcgtg ggaataggta ccagcgggcc taaaaaacgc ggttcgcgtt
    24121 taaaaatata gagatccgcc agcgcgctaa agcgggcgcc aaattcgcgc aagcgtactg
    24181 tcagcatatt tttgggtgaa ggtaccgcgt aacactgcgc ctgaatgccc atatgcaacg
    24241 caataaacaa ggcgcgttcg cagtggaagc gctgagtgat gataataaag tcgttgatat
    24301 caaacacttt gcgggtacgc acaatggagt caagcgtacg gaagccagcg taatcaagca
    24361 caatgtccgc aggatcgacg cccgccgcga taaggtcttt gcgcatggtc atcggttcgt
    24421 tatagctttg cagggcattg tcgccgctga gcagcaggta attgacttta ccgctattgt
    24481 aagcgtttaa cgcgccctgg atacgataac gatagtactg attaatgaca cccttgcgat
    24541 agtatttggc tgtccctaac acgacgccaa cctggcggta ggggagatcc tgtagctcgt
    24601 catagatata gggcgctgtt ttccagctca tccaccgatc gaggccaagc accgtcaaca
    24661 gcagcaagcc taccaggacc aacaggctgt aaaacacgcg ctttaacatg caggaaactc
    24721 gataccagga tgaaagtacg atcaggctac tgtacccgaa gacgtagcgc aagaaaccgc
    24781 cgtctgattg cggagatttt cagcatgatt tcccttgtat cgggtcgcgg gagaggagag
    24841 tcaggccgga taagacgcca gtgcgtcgct atccggcaca tttgcttagc cgagaagcac
    24901 gcggtcaata ttatggcaac ctaacgcttt cagcgttgcg gcggtggcat cccattgaat
    24961 taatgccgca tcgccttttt ccgccagaat cgcgcgctga atatccgcat agtcatagcc
    25021 attgagactc agcaggttta gcgcgccttg cagtggggga agcgtagggt taaaggcggc
    25081 gttttccgca tagctgccgg tgaaaatacg gccatcttta cattccagcg ccacgccgct
    25141 cggtgagtgg ctataaggca tatggctctt attggctgcc gtaatcgccg cttgcgttag
    25201 cgtattgccc gttaacgtaa agccatgatc ctgctcgtcc atcagcagcg ttttgatctc
    25261 cagatctttt ggcccgaaag cgtcaggcag ataatcgcgt aacgtatgcg gcgcgcggcc
    25321 cggcagatga atgcgcagat ccagaccgct gttcagctcg ttcataaact ggcgacagtg
    25381 gccgcaaggc gtgtagttaa cggtgacggc ggcgagccct ttttcgccgc gtagccaggc
    25441 gtggctaatc gcgctttgtt cagcatgcac agtttgttgc atggtggcgc ccaggaactc
    25501 catattcgcg ccgaaatacc agttgccgct aacgccgcgc gcaatcgcgc cgacgttaaa
    25561 atgggacaaa tcggtacggg cgcaggccgc cgccagaggt aacagtgcga aagccagcgc
    25621 gtcttcgtcc agtcccgccg tatttttaag cgtcgagacc tgctctgcgg tcagcatggc
    25681 gggaaaatgg tggtccgcca ggataggggc cagcgctgat tgcaaattat ccgcaagctg
    25741 ggcaaaagca gtttgaaaac gtggatgcat ggcgttgcct cataacaatg taatggaacc
    25801 gtagtttacg ggcctgccat gtcttaatat gtgatctaaa tctcattgct tatgcaactt
    25861 gtgaaactta aatgaaaaat acgcgacgta tcgcaaattt taacccggtc ttttgtcccg
    25921 tcgttagcgc attaccgcca gaatgagcgg aaacaaaaag ggcgctacca gcgaggtaat
    25981 aatgccgcag atcaccagcg ccagggagct aaacgcgcct tcctggtaat ccagctcggc
    26041 gcagcgcgca gtaccgagcg catgtgaggc ggtccccatt gccagcccgc gtgcggcttt
    26101 agtacggatg tgcatcgcgt ttaacagcgt gtggccaaac accgcgccca gaataccgac
    26161 aaaaattacg cataccgcgc tgatcgcggg gatgccgccg atgctgccgc ccaccgccat
    26221 cgcgataggc gtagtcacgg atttaggcag taccgatgcc gcgatttcag gcgttgcgcc
    26281 catcagcaag gcaacggatg ttccggtaat catcgctacc agactgccga caaaacagat
    26341 gctaataatg gatttccaac gcgcgcgaat ctggtgcaac tgttcataaa ggggataggc
    26401 cagcgccacc accgccggtt gcagcagatc gttaagtact tcgctgcctt tgaagtagtg
    26461 ctcgtaggga ataccggtca gcaacagaaa aggaataatg actaccattg ccaccagcag
    26521 cggattcagc aacggcattt taaaatgcgc cgccagtctg cgggcggcga aaaataccgc
    26581 cagcgtcagc ggtaacgacc accagatata tgtcatcatt ttttcgttcc cttctgccca
    26641 accactttac gctcaccgtg tatcagatgt gaactccagc ttacgaccac aaaaacgacc
    26701 agcgtactga tagcgcaaga gaccaccacc gggccgaatt gcgcgcgcag taagtcaaaa
    26761 tattgcatga ccccaacgcc aattggcaca aacagcaacg ccatataacg aatcagcaca
    26821 taacagccgg ggttaaccca ctttgccggc agaatttgca gcgccagcaa tacaaacaga
    26881 attaacatcc cgataatgct gccgggaata gtgataggaa gcagtgatgc aagaaaaatg
    26941 cctgcgtaca aacaggcata aatcaataca aaagcgcgta tatattgcca gataatattc
    27001 agtgacttac tcatgtttaa agcccttgat gagatggatt catcatacaa ttaaacgtta
    27061 aaacgtgcta ccgatcacat catgaattct tagcatagtg ggtatagaca gcaggaacat
    27121 cgggcaatgc ccctggtcgg cggcgttaaa cctgggctaa aaaatacaaa aagcgactca
    27181 gggccaaaga cggcgtctca ttcttacgcc agaacatccc tacgctgcct ttttgctcaa
    27241 tttttggcaa gtttaaaatc gccagttgcc cctggctggc atagcgttgc gccagccgta
    27301 aagaaagaat agagatcata tcgctgcttt gcagcaaatt ggtgctgacg ttcattgacg
    27361 ccgattcaat ggtgttttcc gggagcatga cgccattatc gacgagggcg ttatcaatac
    27421 tgatgcgaat aggggtgccg gttggccaga ctatccaccg ccagtgtgcc agatcgctcc
    27481 aggcgatctg cgctcgcgcg gccagcggat ggtgcggacg cgccacaaag cagaccggct
    27541 cggtataaag tacctgataa ttaagcggca gttgcagggc gcggccgccg acacgcccta
    27601 ccaccacatc cacctgaccg gcaagcaaat cgtgcagcag cggcgtcatt accttctctt
    27661 caatattcag atgcagcgtc ggcatttcgt taagcaggct cagaatcgcc tgtgatacgc
    27721 agtcagtcgc cacgggcgaa cagccgatct tcaggctgcc aaccaggccg ccctgcttga
    27781 aacgggcgat ttcatactgt gaacgctcca gatcgttaat taggcgctgg gcgtgctgga
    27841 gcagtaattt accgccttcc gaggggcgta gtcctttact gtggcgctca aaaagcgtga
    27901 tgcctatctc atcttcgagt tgagatagcc acttcgatag cgccggctgg gagatattca
    27961 tcatccgggc gacgtgcgtc aggttgccct gttcgcccag cgcaaccagc gtttgcaggt
    28021 gatgtaattt caatttctgc gcccagttcg ccattcgcta taacctccag gttatgtctc
    28081 tgcctgaaaa gccattgtac attttatcgc tcactctaca aactcgtaac atagcaaaca
    28141 taaaaacaac atctatctcc ctgcactgag gcattagcta tgactcaacg acgtgatcta
    28201 caagccctta ttgatgccgc gcccgtcggc aaaatgcagt ggcgcgttat catctgctgt
    28261 tttctggtgg ttatgctcga cggtttcgac accgccgcga ttggcttcat cgccccggat
    28321 attcgtactc actggcagct aagcgccagc gaacttgcgc cgctgtttgg cgcagggc
//
LOCUS       DAGWFR010000038        28237 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.039, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000038 DAGWFR010000000
VERSION     DAGWFR010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 28237)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28237)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28237
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.039"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..144)
                     /locus_tag="MOX77_001705"
     CDS             complement(<1..144)
                     /locus_tag="MOX77_001705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HCA3357260.1"
                     /translation="MTTGTDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACAN
                     LLAE"
     gene            341..1105
                     /locus_tag="MOX77_001706"
     CDS             341..1105
                     /locus_tag="MOX77_001706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HCA3357261.1"
                     /translation="MIPTERRQIILDMVAEKGIVSIAELTERMHVSHMTIRRDLQKLE
                     QQGAVIQVSGGVQSSTRVAHEPSHQIKTELATPQKAAIGKLAASLVQPESCIYLDAGT
                     TTLAIARQLVTMNKLTVVTNDFVIADYLMDNSGCTIIHTGGAVCRENRSCVGEAAATL
                     LRGLMIDQAFISASSWSVRGISTPAEDKVTVKRAVASASRQKILVCDATKYGQVATWL
                     ALSLAEFNQIVTDDGLPESAIRALAKVDISLLMAKQ"
     gene            complement(1124..1528)
                     /locus_tag="MOX77_001707"
     CDS             complement(1124..1528)
                     /locus_tag="MOX77_001707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HCA3357262.1"
                     /translation="MELRNTAFHLLRQLFQQHTARWQHELPELTKPQYAVMRVIAEHP
                     GIEQVDLTEAAVSTKATLAEMLSRMENRGLVKRENDPLDKRRRFVYLTVQGQTLLAAA
                     IPLGDRVDDEFLGRLSAEEREQFTQLVRKMMT"
     gene            1699..2292
                     /locus_tag="MOX77_001708"
     CDS             1699..2292
                     /locus_tag="MOX77_001708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HCA3357263.1"
                     /translation="MRLIVGMTGATGAPLGVELLQALRAIPDVETHLVMSKWAKTTIE
                     LETPYTPAEVAALADYCHSPADQAATISSGSFRTDGMIIIPCSMKTLAGVRAGYADGL
                     VGRAADVVLKEGRKLVLVPREMPLSTIHLENMLALSRMGVAIVPPMPAFYNLPQTVDD
                     IIQHIVARVLDQFGLEHTRARRWQGLRQAANFSQENG"
     gene            2292..3719
                     /locus_tag="MOX77_001709"
     CDS             2292..3719
                     /locus_tag="MOX77_001709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HCA3357264.1"
                     /translation="MAFDDLRSFLHALDQQGQLLKISEEVNAEPDLAAAANATGRIGD
                     GAPALWFDNIRGFTDARVAMNTIGSWQNHAISLGLPPNTPVKKQIDEFIRRWDNFPVA
                     PERRANPGWAENTVDGDAINLFDILPLFRLNDGDGGFYLDKACVVSRDPLDPDNFGKQ
                     NVGIYRMEVKGKRKLGLQPVPMHDIALHLHKAEERGEDLPIAITLGNDPIITLMGATP
                     LKYDQSEYEMAGALRESPYPIATAPLTGFDVPWGSEVILEGVIESRKREIEGPFGEFT
                     GHYSGGRNMTVVRIDKVSYHSKPIFESLYLGMPWTEIDYLMGPATCVPLYQQLKAEFP
                     EVQAVNAMYTHGLLAIISTKKRYGGFARAVGLRAMTTPHGLGYVKMVIMVDEDVDPFN
                     LPQVMWALSSKVNPAGDLVQLPNMSVLELDPGSSPAGITDKLIIDATTPVAPDNRGHY
                     SQPVVDLPETKAWAEKLTAMLANRK"
     gene            3730..3966
                     /locus_tag="MOX77_001710"
     CDS             3730..3966
                     /locus_tag="MOX77_001710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357265.1"
                     /translation="MICPRCADAHIELMATSPVKGVWTVYQCQHCLYTWRDTEPLRRT
                     SREHYPQAFRMTQKDIDDAPMVPSIPPLLAEDKR"
     gene            complement(4011..5003)
                     /gene="rpoS"
                     /locus_tag="MOX77_001711"
     CDS             complement(4011..5003)
                     /gene="rpoS"
                     /locus_tag="MOX77_001711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000081498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoS"
                     /protein_id="HCA3357266.1"
                     /translation="MSQNTLKVHDLNEDAEFDENGVEAFDEKALSEEEPSDNDLAEEE
                     LLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLV
                     VKIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMN
                     QTRTIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNER
                     ITSVDTPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLAR
                     RFGLLGYEAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE"
     gene            complement(5066..6187)
                     /gene="nlpD"
                     /locus_tag="MOX77_001712"
     CDS             complement(5066..6187)
                     /gene="nlpD"
                     /locus_tag="MOX77_001712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein hydrolase activator NlpD"
                     /protein_id="HCA3357267.1"
                     /translation="MSAGSPKFTVSRIAALSLVSLWLAGCTSSSNPPAPVTSVDSGSS
                     SNTNSGMLITPPPKMGATPQQAPQIQPVQRPVTQPMQTQPVTEQPVQMENGRIVYNRQ
                     YGNIPKGSYTGGSTYTVKKGDTLFYIAWITGNDFRDLAQRNSISAPYSLNVGQTLQVG
                     NASGTPITGGNAITQADAAQQGVVTRSAQNSTVAVASQPTITYSEGSGEQSANKMLPN
                     NKPAGTVVTAPVTAPTVSTTEPNASSTSTSAPISAWRWPTDGKVIENFGASEGGNKGI
                     DIAGSKGQAIVATADGRVVYAGNALRGYGNLIIIKHNDDYLSAYAHNDTMLVREQQEV
                     KAGQKIATMGSTGTSSTRLHFEIRYKGKSVNPLRYLPQR"
     gene            complement(6363..6989)
                     /locus_tag="MOX77_001713"
     CDS             complement(6363..6989)
                     /locus_tag="MOX77_001713"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase"
                     /protein_id="HCA3357268.1"
                     /translation="MVSGRVQALLEQLRAQGIRDELVLNALAAVPREKFIDEAFEHKA
                     WENIALPIGQGQTISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLVHHVCS
                     VERIKGLQWQARRRLKQLDLHNVSTRHGDGWQGWQARAPFDAIIVTAAPPEIPTALMA
                     QLDEGGILVLPVGDEQQFLKRVRRRGGEFIIDTVEAVRFVPLVKGELA"
     gene            complement(6983..7744)
                     /gene="surE"
                     /locus_tag="MOX77_001714"
     CDS             complement(6983..7744)
                     /gene="surE"
                     /locus_tag="MOX77_001714"
                     /EC_number="3.1.3.5"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HCA3357269.1"
                     /translation="MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNS
                     LTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVI
                     YSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNV
                     PDLPLAQVKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVD
                     EGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW"
     gene            complement(7725..8774)
                     /gene="truD"
                     /locus_tag="MOX77_001715"
     CDS             complement(7725..8774)
                     /gene="truD"
                     /locus_tag="MOX77_001715"
                     /EC_number="5.4.99.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(13) synthase TruD"
                     /protein_id="HCA3357270.1"
                     /translation="MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHI
                     LLRILKNGCNTRFVADVLAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFS
                     AFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYF
                     GAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQ
                     VVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQ
                     DAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVV
                     RELINTMGDYAHIAE"
     gene            complement(8771..9250)
                     /gene="ispF"
                     /locus_tag="MOX77_001716"
     CDS             complement(8771..9250)
                     /gene="ispF"
                     /locus_tag="MOX77_001716"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HCA3357271.1"
                     /translation="MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHAL
                     TDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQA
                     PKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK"
     gene            complement(9250..9960)
                     /gene="ispD"
                     /locus_tag="MOX77_001717"
     CDS             complement(9250..9960)
                     /gene="ispD"
                     /locus_tag="MOX77_001717"
                     /EC_number="2.7.7.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HCA3357272.1"
                     /translation="MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHA
                     LLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAKAQWV
                     LVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADL
                     WHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPE
                     DLALAEFYLTRTIHQEKA"
     gene            complement(9979..10290)
                     /gene="ftsB"
                     /locus_tag="MOX77_001718"
     CDS             complement(9979..10290)
                     /gene="ftsB"
                     /locus_tag="MOX77_001718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsB"
                     /protein_id="HCA3357273.1"
                     /translation="MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNA
                     KLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTH
                     R"
     gene            complement(10481..10804)
                     /locus_tag="MOX77_001719"
     CDS             complement(10481..10804)
                     /locus_tag="MOX77_001719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011233164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3561 family protein"
                     /protein_id="HCA3357274.1"
                     /translation="MRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFL
                     LYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALF
                     IWLLG"
     gene            complement(10855..11460)
                     /gene="cysC"
                     /locus_tag="MOX77_001720"
     CDS             complement(10855..11460)
                     /gene="cysC"
                     /locus_tag="MOX77_001720"
                     /EC_number="2.7.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyl-sulfate kinase"
                     /protein_id="HCA3357275.1"
                     /translation="MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTV
                     AGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLI
                     VLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFT
                     GIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS"
     gene            complement(11447..12886)
                     /gene="cysN"
                     /locus_tag="MOX77_001721"
     CDS             complement(11447..12886)
                     /gene="cysN"
                     /locus_tag="MOX77_001721"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysN"
                     /protein_id="HCA3357276.1"
                     /translation="MNTILAQQIASEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLI
                     GRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYF
                     STEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGI
                     KHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSA
                     NMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNPDFRGYAGTLASGSVKVGE
                     RIKVLPSGVESSVARIVTFDGDKEEVCAGEAITLVLNDDIDISRGDLLLAANETLAPA
                     RHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAICYQIDINNLTQRDVESLPLNG
                     IGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPPVEYSA
                     FELELNALVRRHFPHWDARDLLGDKHGAA"
     gene            complement(12896..13804)
                     /gene="cysD"
                     /locus_tag="MOX77_001722"
     CDS             complement(12896..13804)
                     /gene="cysD"
                     /locus_tag="MOX77_001722"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysD"
                     /protein_id="HCA3357277.1"
                     /translation="MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVML
                     HLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINP
                     FVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDP
                     KNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLE
                     RDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVST
                     TSERQGRMIDRDQAGSMELKKRQGYF"
     gene            14055..15101
                     /locus_tag="MOX77_001723"
     CDS             14055..15101
                     /locus_tag="MOX77_001723"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase"
                     /protein_id="HCA3357278.1"
                     /translation="MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFF
                     PGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIA
                     AHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKD
                     IPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLNNLIVGDKLYFNSGK
                     NTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSV
                     EATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIM
                     LPLVKELAKAEKTS"
     repeat_region   15116..15536
                     /inference="COORDINATES: alignment:crt:1.2"
                     /inference="COORDINATES: alignment:pilercr:v1.02"
                     /rpt_family="CRISPR"
                     /rpt_type=direct
                     /rpt_unit_range=15179..15206
                     /rpt_unit_seq="ggtttatccccgctggcgcggggaacac"
     gene            complement(15621..15914)
                     /gene="cas2"
                     /locus_tag="MOX77_001724"
     CDS             complement(15621..15914)
                     /gene="cas2"
                     /locus_tag="MOX77_001724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000062285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated endoribonuclease
                     Cas2"
                     /protein_id="HCA3357279.1"
                     /translation="MSMLVVVTENVPPRLRGRLAVWLLEIRAGVYVGDVSAKIREMIW
                     QQVSVLADEGNVVMAWATNTESGFEFQTFGVNRRIPVDLDGLRLVSFLPVENQ"
     gene            complement(15917..16834)
                     /gene="cas1e"
                     /locus_tag="MOX77_001725"
     CDS             complement(15917..16834)
                     /gene="cas1e"
                     /locus_tag="MOX77_001725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated endonuclease Cas1"
                     /protein_id="HCA3357280.1"
                     /translation="MSWLPLNPIPLKDRVSMIFLQYGQIDVIDGAFVLIDKTGVRTHI
                     PVGSVACIMLEPGTRVSHAAVRLAATVGTLLVWGGEAGVRVYASGQPGGARSDKLLYQ
                     AKLALDEDLRLKVVRKMFELRFGEPAPSRRSVDQLRGIEGSRVRATYALLAKQYGVKW
                     QGRRYDPKDWEKGDVINQCISSATSCLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYD
                     IADIIKFEIVVPKAFEIARRNPAEPDRDVRIACRDIFRSGKTLAKLIPLIEDVLAAGE
                     IQPPLPPEDSHPIAIPLPVALGDSGHRST"
     gene            complement(16834..17538)
                     /gene="cas6e"
                     /locus_tag="MOX77_001726"
     CDS             complement(16834..17538)
                     /gene="cas6e"
                     /locus_tag="MOX77_001726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001748704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated protein
                     Cas6/Cse3/CasE"
                     /protein_id="HCA3357281.1"
                     /translation="MYLSRIQLRFNNLRPEMLAKWNSARPYASHQWLWQLFPEQELRQ
                     FLFREEAHGGFFMLSAIPPLLQHSLFLIETKLFNPQLTNGLELDFQLRANPVITRNGK
                     RSDVMMNAKHQAKANGVEKERWWELQQQAAQAWLEQQGQQHGFRLIAPEPDDFAMWAG
                     DEYSELQAHCGCVQAYQQHRFVRKDQETPITFSSVDFSGALCITDAALFKQALFSGLG
                     KSKALGCGMLMVKRKR"
     gene            complement(17538..18263)
                     /gene="cas5e"
                     /locus_tag="MOX77_001727"
     CDS             complement(17538..18263)
                     /gene="cas5e"
                     /locus_tag="MOX77_001727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000666428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated protein Cas5/CasD"
                     /protein_id="HCA3357282.1"
                     /translation="MKEYLVFQLYAPLASWGEEASGEIRHSATVPTRSALLGLLAAAL
                     GIRRDEEARLNNFNRHYHLAVHALASQDRWLRDYHTVSAPRENKKYRYYTRRDELTLA
                     SDEVGTLISQREYRCDGYWHVAISATPDAPYSLSELREALLTPHFPLYLGRKSCPLAL
                     PLAARLMTGTLKEVFTHAVEEISAAELSGFTLREGICYWDDPDEESLVWQQKQHSNNQ
                     PVSRQRWQFGGYTRFNGPLQERT"
     gene            complement(18273..19331)
                     /gene="cas7e"
                     /locus_tag="MOX77_001728"
     CDS             complement(18273..19331)
                     /gene="cas7e"
                     /locus_tag="MOX77_001728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001804435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated protein
                     Cas7/Cse4/CasC"
                     /protein_id="HCA3357283.1"
                     /translation="MTTFIQLHLLTAYAPANLNRDESGRPKTAFMGGVERLRVSSQSL
                     KRAWRVSETFEAAMDGFMGKRTRRIGVDYVYRPMKDAGIEEKIAKSSSELIAKQFGKL
                     KSDKDAKPEKNLEIEQIVHVSNHEISLIKQLVDTLIADKREPNDEEVKLLRKEQRSVD
                     MALFDRMLASSPEFNVEAACQVSHALGVSAVTVESDFFTAVDDLNNKEEDAGSGHMGE
                     QGFASALFYTYVCISRDLLVENLGGNEELAKRTIAALTETALTVSPTGKQNSFASRAY
                     ATYALAEVGQKQPRSLAAAFFQPVRDTDQIPAAITRLKQQRASFDSVYGNCADDYREL
                     NVQEGTGSLAELLAFVSQ"
     gene            complement(19354..19956)
                     /gene="casB"
                     /locus_tag="MOX77_001729"
     CDS             complement(19354..19956)
                     /gene="casB"
                     /locus_tag="MOX77_001729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000935106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated protein Cse2/CasB"
                     /protein_id="HCA3357284.1"
                     /translation="MLNSNTAVLCRILHPDAQKALLDWFATLSERYERKDGKRVNGRA
                     WRAELKRMAPPYGVMICEGHDALRQALLKHMRLQPLDEMALALFVSVAVHIKSHKENI
                     SFAAQLGEKLKGSTSCVSGLRFERLQKASDPETFCQLLIQAVKIRGTEGVNVLSLADG
                     IFLWMEEWQRRENHQPEFRNPFERSRIRWANEYLSTSRGK"
     gene            complement(19973..21508)
                     /gene="casA"
                     /locus_tag="MOX77_001730"
     CDS             complement(19973..21508)
                     /gene="casA"
                     /locus_tag="MOX77_001730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000366313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated protein Cse1/CasA"
                     /protein_id="HCA3357285.1"
                     /translation="MDLTKEKWLPVIFSNGDKKKISLRDLLDNRIQDLAYPRADFQGA
                     AWQMLIGILQCTVAPEDKEEWADIWHESIEFEQWEKALNTISLALQFGEQKPSFLQSF
                     DPLDSEYGSIAGLLVDAPGGNALKLNKDHFVKRGNVEQICPHCAAIALFAIQTNSPAG
                     GAGYRVGMRGGGPLTTLVVPQEEDKYPLWKKLWLNVLPQEEPPNVTQHPLIFPWLAPT
                     KTSEKAGNVVTPDNAHPLQAYWGMPRRIELDFTHTVAGICDLCGEHHESLLLQMRSKN
                     YGVQYDSWLHPFSPYRQALKDPSAPWLAFKGQPGGLSYKDWLGLMLNREDKFNKMQPA
                     KVVRAAGQRNKMSLWCFAWDMNKAKVRCWYQHRIPLISVSHEEQFLAALNIVLVLASE
                     SLSLLRNALKSAKFDCPKEAKMDFSMVDIAFWQETEPAFRTLQEALAVDPLRQDTQTR
                     HAVSQWEAELAHYLFHVFDRDALTNPDCPDDILQRQLTARQDLASSYRKHKARKDVLA
                     LVE"
     gene            21866..24566
                     /locus_tag="MOX77_001731"
                     /pseudo
     CDS             21866..24566
                     /locus_tag="MOX77_001731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000192071.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated helicase/endonuclease Cas3"
     gene            24947..25900
                     /gene="sopD"
                     /locus_tag="MOX77_001732"
     CDS             24947..25900
                     /gene="sopD"
                     /locus_tag="MOX77_001732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-1 type III secretion system effector SopD"
                     /protein_id="HCA3357286.1"
                     /translation="MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHF
                     RAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIK
                     MDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGAKMTW
                     HPELLQESISTLRKEVTGNAQIKAAVYEMMRPAEAPDHPLVEWQDSLTEDEKSMLACI
                     NAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHTYSPFAEFKPTNSGFLKKLNQ
                     DYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT"
     gene            complement(25988..26722)
                     /gene="cysH"
                     /locus_tag="MOX77_001733"
     CDS             complement(25988..26722)
                     /gene="cysH"
                     /locus_tag="MOX77_001733"
                     /EC_number="1.8.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoadenosine phosphosulfate reductase"
                     /protein_id="HCA3357287.1"
                     /translation="MSQLDLNALNELPKVDRVLALAETNAQLETLTAEERVAWALENL
                     PGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLK
                     VYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELNAQTWFAGLRREQ
                     SGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWAQGYLSVGDTHTT
                     RKWEPGMAEEETRFFGLKRECGLHEG"
     gene            complement(26798..>28237)
                     /gene="cysI"
                     /locus_tag="MOX77_001734"
     CDS             complement(26798..>28237)
                     /gene="cysI"
                     /locus_tag="MOX77_001734"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001290736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="assimilatory sulfite reductase (NADPH)
                     hemoprotein subunit"
                     /protein_id="HCA3357288.1"
                     /translation="TTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQ
                     MLHSVGLDALATANDMNRNVLCTSNPYESELHAEAYEWAKKISEHLLPRTRAYAEIWL
                     DQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNL
                     LVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKY
                     TLERVGLETFKAEVERRAGITFEPIRPYEFTGRGDRIGWVKGIDDKWHLTLFIENGRI
                     LDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIEKLARDHGLMNAVS
                     AQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGC
                     GRAMLAEIGLVGKAPGRYNLHLGGNRIGSRIPRMYQENITEPDIQASLDELIGRWAKE
                     REAGEGFGDFTVRAGIIRPVLDPARDFWE"
BASE COUNT         6856 a         7680 c         6950 g         6751 t
ORIGIN      
        1 ttcagcgagc agattcgcgc acgcttgcgg gttaagatcg gccccccatg tggaaagccc
       61 ggcgcgcagg catgaacgcg cagcgcccat tcccattgag ccaagcccca caatgccgac
      121 atgaaaatca gttcctgttg tcattatcac tccatgttaa tttacgtgat attatgtttt
      181 gttatgtgaa tataggcgtt tttgtaaaca attgcggtga gttgtttcac aaaaaataac
      241 aaaatatgtt attttttgtg aaggcaatcc tcatagaact tcacacgctg tgacgagaaa
      301 tcgcgtaaaa tcgcgacagg actaaagaaa ggagcagacg ttgataccta ctgagcgtcg
      361 acaaatcatt cttgatatgg tggcggagaa aggcatcgtc agtatcgctg aactgaccga
      421 gcgcatgcat gtatcccaca tgactatccg ccgtgattta caaaaactgg agcagcaagg
      481 cgcggtaatc caggtctctg gcggcgtgca atcatcgact cgcgtggcgc acgaaccctc
      541 gcatcagatc aaaaccgaac tggcgacgcc gcagaaagcg gcgattggca aactggccgc
      601 cagcctggta cagccagaaa gctgtatcta ccttgatgca ggtacgacca cgctggcgat
      661 cgccaggcag ctggttacga tgaataaact tacggtggtg accaatgatt tcgttatcgc
      721 cgattacctg atggacaata gcggttgcac aattattcac actggcgggg cggtatgccg
      781 ggaaaaccgg tcgtgcgtcg gtgaagccgc ggcgacgctt ttgcgcgggc tgatgattga
      841 ccaggccttt atttccgcct cttcctggag cgtgcgcggt atttcaacgc cggcagaaga
      901 taaagtcacg gtgaaacggg ccgtcgccag cgccagccgc caaaaaattc tggtgtgcga
      961 cgcgaccaaa tacggccagg tcgcgacgtg gctggcgtta tcgctggcgg aattcaacca
     1021 aatcgtcacc gatgacggcc tgccggaaag cgcaattcgg gcgctggcta aagtggatat
     1081 ctcactgctg atggccaaac aatagcgaag cggcgcaagc cgcttacgtc atcatcttgc
     1141 gaaccagttg cgtaaactgt tcgcgttctt cagcgctcag tcgccccaaa aactcatcgt
     1201 caacgcgatc ccccagtggt atcgcggcgg cgagcaacgt ttggccctga acggtgagat
     1261 agacaaaacg ccgacgttta tccagcggat cgttttctcg ctttaccagc ccacgatttt
     1321 ccatccggct taacatctcc gccagcgtcg ctttagtgct gaccgccgct tcggtcagat
     1381 cgacctgttc aatacccgga tgttcagcaa taacgcgcat caccgcatat tgaggtttgg
     1441 tgagctccgg tagttcatgc tgccagcgtg cggtatgttg ctgaaaaagt tggcgtaaca
     1501 gatgaaacgc ggtgtttcgt aactccatga gcgctccgga taaattaact ttttctatca
     1561 taacgactta tgcacggttt tttaatgacg aatgctttag ctaaacgtgc gcaggcatcg
     1621 ggagcgatct tgtcgcaaag gccgtgtggg cgtattttga tcaaaatgtt cgtatacgaa
     1681 cgatatttga ggtaagaaat gagattgatt gtggggatga ccggtgcgac cggcgcgccg
     1741 cttggcgtcg agctactcca ggcattgcgg gcgatacctg atgttgaaac gcatctggta
     1801 atgtcaaagt gggcgaaaac cactattgaa ctggagacgc cctacacgcc cgctgaggta
     1861 gccgccctgg cagattattg tcatagcccg gccgatcagg cggcgaccat ttcctccggc
     1921 tcatttcgta ccgacggcat gattattatc ccctgcagta tgaaaacact ggcgggggtt
     1981 cgcgccggct atgccgatgg gctggtggga cgcgctgccg atgtcgtgtt gaaagagggt
     2041 cgcaagctgg tgcttgtgcc gcgggaaatg ccgctcagca caattcatct ggaaaacatg
     2101 cttgcgcttt ctcgtatggg ggtggcgata gtgccgccca tgcccgcgtt ctacaacctg
     2161 ccgcaaaccg ttgacgatat tatccagcac atcgtggcgc gcgttctcga ccagtttggt
     2221 ctggagcata cgcgcgcgcg ccgctggcaa ggactgcgac aggcagcaaa tttttcacag
     2281 gagaatggat aatggcattt gatgatttgc gcagtttttt acatgcgctg gatcagcagg
     2341 gacaactgct gaaaatcagc gaggaagtga atgcggagcc ggatctcgcc gccgctgcca
     2401 acgcaacggg acgaatcggc gatggcgcgc ccgcgctgtg gtttgacaat attcgtggtt
     2461 ttaccgacgc ccgcgtggcg atgaatacca tcggttcctg gcagaaccat gccatctctc
     2521 tgggtttgcc gcctaacacg ccggttaaaa aacagatcga tgaatttatt cgccgctggg
     2581 acaattttcc ggtagcgccg gaacgacggg cgaatccggg ctgggcggaa aataccgtcg
     2641 acggcgacgc gatcaacctg tttgatatcc tgccgctgtt tcgtctgaac gacggcgacg
     2701 gcggattcta tctggataaa gcctgtgtgg tatcacgcga tccgctcgat cccgataact
     2761 tcggcaagca gaatgtcggc atctaccgta tggaagttaa aggcaagcgt aagctgggtc
     2821 tgcaaccagt gccgatgcat gatatcgcat tgcacctgca caaagccgaa gagcgcgggg
     2881 aagatctgcc gattgcgatc acgttgggta acgatccgat cattaccctg atgggcgcaa
     2941 cgccgctgaa atacgatcag tcagagtatg aaatggcagg cgcgctgcgt gaaagcccct
     3001 atcctatcgc caccgcgccg ctgaccggtt ttgatgtacc gtggggatct gaagtcattc
     3061 ttgaaggggt catcgaaagc cgtaaacgtg aaattgaagg gccgttcggc gaatttaccg
     3121 gccactattc cggcggtcgc aacatgaccg tggtgcgtat cgataaggtc tcttaccaca
     3181 gcaaacccat ttttgaatcg ctctatttgg ggatgccgtg gacggaaatc gactacctga
     3241 tggggccggc gacctgtgtg ccactgtatc aacagctgaa agccgaattt ccggaagtgc
     3301 aggcggtaaa cgctatgtac acccacggct tgctggccat catctcgacc aaaaaacgct
     3361 acggcggctt tgcccgtgcg gtgggcctgc gcgcgatgac gacgccgcac ggtctgggat
     3421 atgtgaagat ggtgatcatg gttgatgaag atgtcgatcc atttaatctg ccacaggtga
     3481 tgtgggcgtt gtcgtcgaaa gtgaatccgg caggcgatct ggtacagcta ccgaatatgt
     3541 ccgtcctgga actggacccg ggttcaagcc cggcggggat taccgacaaa ctgatcattg
     3601 acgctaccac gccggttgcg ccagataacc gtggtcacta tagccagccg gttgtggatt
     3661 taccggaaac taaagcctgg gctgaaaagc tgaccgccat gctggccaac cgtaaataag
     3721 gagtaaccga tgatttgtcc acgctgtgcc gatgcacata ttgaactcat ggcgacttcg
     3781 ccggtaaaag gagtctggac ggtatatcag tgtcagcatt gtctgtatac ctggcgcgat
     3841 accgaaccgt tacgccgtac cagccgcgaa cactatccac aagcgtttcg catgacgcaa
     3901 aaagatattg atgacgcgcc aatggtgccg agtatcccgc cgttgctggc agaagacaaa
     3961 cggtaaaaaa aaggccagtc tgtcgactgg cctttttttg acaagggtac ttactcgcgg
     4021 aacagcgctt cgatattcag cccctgcgtc tgcagaattt cgcgcagacg gcgcaggcct
     4081 tcaacctgaa tctgacgaac acgttcacgc gtaagaccga tttcacggcc tacatcttcc
     4141 agtgtcgcag cttcatatcc cagcagaccg aaacggcgcg ccagcacttc acgctgtttg
     4201 gcgttcagtt cgaacaacca tttgacgatg ctctgtttca tatcgtcatc ttgcgtggtg
     4261 tcttccggac cgttctcttt ttcatcggcc aggatgtcca gcaacgcttt ttcggaatca
     4321 ccgcccagcg gggtgtctac cgaggtaatg cgctcgttga gacgaagcat acggctgacg
     4381 tcatcaaccg gtttatccag ttgctctgca atttcttccg cactcggttc gtggtccagt
     4441 ttatgcgaca actcacgtgc ggtgcgcagg tatacgttca gctctttaac aatgtgaatc
     4501 ggcaagcgaa tcgtacgggt ttggttcata atcgcccgtt cgattgtctg gcgaatccac
     4561 caggttgcgt atgttgagaa gcggaacccg cgttccgggt caaacttctc gactgcacgg
     4621 ataagcccca ggttgccctc ttcaatcagg tccagcaacg ccagtccacg attgccataa
     4681 cggcgggcaa tttttaccac cagacgcagg ttactctcaa tcatgcgacg gcgagaagcg
     4741 acatctccac gcagtgcgcg acgcgcaaaa tagacttctt cttcggctgt taacagtggt
     4801 gaatacccaa tctcaccaag gtaaagctga gtcgcgtcca acacacgctg tgtggcccct
     4861 tgcgataaca gctcttcttc agccaggtcg ttatcactgg gttcctcttc actcaaggct
     4921 ttttcgtcaa aagcctctac tccgttctca tcaaattccg cgtcttcatt taaatcatga
     4981 actttcagcg tattctgact cataaggtgg ctcctacccg tgatcccttg acggaactag
     5041 caagtcaaag cctggttccg ccgctttatc gctgcggtaa ataacgcagc gggtttacgg
     5101 atttcccctt gtaacgaatt tcaaaatgca agcgtgtaga gctggtgccg gtgctaccca
     5161 tagtagcgat tttttgcccc gccttaactt cctgttgttc ccggaccagc atcgtatcat
     5221 tatgggcgta ggcactcagg taatcatcgt tatgtttgat gataataaga ttaccgtaac
     5281 cacgcagtgc gttaccggca tatacgacgc gcccatcagc ggttgcgacg atagcctgtc
     5341 ccttactgcc tgcaatgtcg atccctttat tgcccccttc ggaagcgcca aagttttcga
     5401 tcactttgcc atccgtcggc cagcgccatg cggaaatcgg cgcgctggtt gacgtactgc
     5461 ttgcatttgg ttcggtcgtg cttaccgttg gtgccgttac aggcgctgtg acaaccgtcc
     5521 cagcaggctt gttgtttggc aacattttgt tagcactttg ttcacctgag ccctcagaat
     5581 acgtaattgt tggttgagac gcaactgcaa cggtggaatt ttgtgcagac ctggtcacaa
     5641 ctccttgctg tgctgcatcc gcctgggtga tcgcatttcc gccagtaatt ggcgtaccgg
     5701 atgcgttacc aacttgcaaa gtttgcccta cattcaggct atacggggca gaaatactgt
     5761 ttctctgggc cagatcgcgg aaatcattcc cggtaatcca ggcgatgtaa aaaagcgtat
     5821 cacccttttt cacggtgtaa gtactgccgc ccgtatagct acctttcgga atattcccat
     5881 actggcgatt gtatacgatt cgcccatttt ccatctgcac gggttgttcc gtgaccggtt
     5941 gagtttgcat gggctgcgtt acaggacgct gaacgggttg aatttgcggc gcttgttgcg
     6001 gcgtcgcgcc catttttggc ggcggtgtga tcaacatccc ggaattggta tttgatgacg
     6061 acccactgtc cacagacgtg accggcgccg gagggtttga cgaactggta caacctgcca
     6121 gccatagtga aaccagtgat agtgccgcaa tgcgactaac ggtgaatttt gggcttcccg
     6181 cgctcattta tcccccagga aaaaatttgg ttaacaacca gtgacgtaag aaccgtgcaa
     6241 cgcattaagt gaacacggga aaatgtgttc acgatacgct taacccaccg ggaataacca
     6301 ggaaaactcc aggtattcgt ttcggcttca tcaggcgtaa tagtggctgt ttgcagggca
     6361 aactaggcca gctctccctt gactaacggg acgaagcgaa cggcctccac ggtatcgata
     6421 ataaattcgc cgccccggcg acgcacgcgt ttcaaaaact gctgctcatc gcccacaggc
     6481 agaacaagaa tgccgccttc atccaactgt gccatgagcg cggtaggaat ttccggcggc
     6541 gcggccgtca caatgatagc gtcaaacggc gcacgcgcct gccagccttg ccagccatcg
     6601 ccatgacggg tagaaacatt atgtaaatcg agctgcttca ggcggcggcg cgcctgccat
     6661 tgcagcccct taatccgctc aacggagcaa acgtgatgta ccagatgcgc tagaatcgcc
     6721 gtctgatagc cggaaccggt gccaatttcc aacaccctgg attgcggcgt cagttcgagc
     6781 agttccgtca ttcgcgccac catatagggc tgcgaaatcg tctgaccctg gcctatcggc
     6841 aaagcgatat tttcccaggc cttatgttca aacgcttcat caataaattt ctcgcgcggc
     6901 actgcggcaa gcgcattaag caccagctca tctctgatgc cctgcgcgcg caattgttca
     6961 agaagagcct gtacacgtcc acttaccatt gcgtgccaac tcccacgctg tctaaccagt
     7021 ctgaaaccac atcatgcgcg ctgtgcgcgg ttaaatccac atgcaacggc gtgacggaga
     7081 cgtagccttc atccaccgcc gcgaaatcgg tatccggccc ggcatcgtat ttatcacccg
     7141 gcgggccaat ccagtacaat gtattaccgc gtggatcttc ctgcgggatc actttatccg
     7201 ctggatggcg gctaccgcag cgagtcacgc ggatgccttt aacctgcgct aacggtagat
     7261 ccgggacatt cacgttgaga atacgcccgg tacgcaacgg ctcccggctt aaccctcgca
     7321 aaagcgcgca agtcacggct gcagccgtat cataatgctg atagccgtta agggagaccg
     7381 ctaatgccgg aaagccgaga tgacgacctt ccatcgccgc ggcgacagta ccggaataga
     7441 tcacatcatc gcccagattc ggacccgcgt taataccgga aacgacaata tccggacgcg
     7501 gacgcattaa ggcattaacg cccagataga cgcaatcggt cggcgtcccc atctgtacag
     7561 cgatatcgcc attatcaaag gtaaaagtac gaagcgaaga ttccagcgtg agggaattag
     7621 acgcgccgct gcggttacga tccggggcta cgacctgtac atcagcaaac tcacgcagcg
     7681 ctttcgccag cgtttgtata ccgggcgcgt gaaccccgtc atcgttactc agcaatatgc
     7741 gcataatcac ccattgtgtt gatcagttcc cttactacgc tggtggcaaa actgcctgcg
     7801 ggcagccaga aacgtaactc gacggtaacg tcatcccacc agttccagct taattgttgc
     7861 ggataaagca gcatcgctct gcgcgacgcc tctacttttt cgcgcagcaa cagcgattgc
     7921 aacaccgttt cctgggcaat ggcatcttgc tcaaacgcca gcgccgcacg ctgtgttccc
     7981 cactctccgc tgcccggcaa cgacgctgta atcatcagct ctttttcgtc tacccggcgc
     8041 tgcaattcag gcagttcttc agatgtcgcg acgaaccagc ttccacgccc cgctaattgt
     8101 agcgcatcgc cgtcaacaac ttgattaaag tctggtttct tcagccgctg gtgaacaatt
     8161 tgattaaaca acgcgctacg cgccgccgac aaccaaaaac tgcgtttatt gcgatcgcgc
     8221 accggcgcgt tactttgcgc ccagcgcagc gcgccctgca agttgctgcc gccaatgccg
     8281 aatcgttgtg cgccaaaata gttcggcacg ccgccatcgc gaatcgcctg caatcgtgtt
     8341 tcgacatcgc ggcgatcgct tatttcacgc aataccagcg taaaggcatt gcctttcagc
     8401 gcgcctaaac gcagcttacg cttgtgacgc gcgtattcca gtactttaca accttccagc
     8461 tgaaaggcgc tgaaatcggg catctctttc cccggcacgc gcgcgcacag ccactgctcg
     8521 gtaacggcgt gtttatcttt ttgcccggca aagctcactt cgcgagcgtg aattttcagg
     8581 aatttcgcca gcacgtcagc gacaaaacgg gtattgcaac cgtttttcaa aatacgcagc
     8641 agaatgtgct cgccttcacc atccggcgta aagcctaaat cttcaaccac cacaaaatct
     8701 tccggattcg ctttcagcaa tccgctacct tgtggttttc cgtgcagcca ggtgagattg
     8761 tcaaactctg tcatttcgcc gccttcatca gcaacgccac cgcttcgcag gcaatgcctt
     8821 ctccgcgtcc ggtaaatccg agcttttccg tcgtcgtcgc cttcacgtta acatcatcca
     8881 tatggcagcc gagatcttcg gcgataaaga cgcgcatttg cggaatatgc ggcagcattt
     8941 tcggcgcctg cgcaataatg gtgacatcca cgttgccgag ggtgtatccc ttggcctgaa
     9001 tacgacgcca ggcttcacgc agtagttcgc ggctatccgc tcccttaaat gccggatcgg
     9061 tatccgggaa gagcttgccg atatcgccaa gcgccgccgc gcccagcagc gcatcggtca
     9121 gcgcatgtaa cgccacatcg ccatcggaat gcgccaatag ccctttttca taagggatac
     9181 gcacgccgcc aataataatc ggcccttctc cgccaaacgc gtgtacgtca aaaccgtgtc
     9241 caattcgcat tatgctttct cctggtggat ggttcgggtc agataaaatt ccgccagcgc
     9301 cagatcttcc ggacgggtga ccttgatgtt atccgcgcga ccttctacca gcgccggatg
     9361 aaaaccacaa tactccagcg ctgacgcctc gtcggtgatg gtcgcgcctt cattcagcgc
     9421 acgcgtcaga caatcgtgca agagttcgcg ggggaaaaac tgcggggtga gcgcgtgcca
     9481 taaatcggcg cgctctacgg tatgggcaat agcgtttttc cccggttcgc cgcgtttcat
     9541 ggtgtcgcgc accggactgg cgagaatacc gccgacccgg ctgttttcgc tgatggccag
     9601 taaccgcgca aggtcatcct gatgcaaaca gggtcttgcc gcgtcgtgca ccagcaccca
     9661 ctgcgccttt gcaacggcct gtaacccggc caaaacggaa tcagcgcgtt cgttgccgcc
     9721 atccacaacg gtgatttgcg gatgattcgc cagcggaagt tgggcaaagc gatgatcgcc
     9781 agggctgata gcaataacaa cgcgtgtcac ccgaggatgc gccagcagcg catgaactga
     9841 gtgctccaga atggttttat taccgattga gagatactgc ttaggacatt ctgtttgcat
     9901 tcggcggcca aatccggccg ccggcaccac ggcgcaaacg tccaataaag tggctgccat
     9961 gttaaatccc tggatggttt atcgatgagt ttgccccgcc gttgccgcgc gttttgaggc
    10021 gtcaggcacc agacgataga aggtttcgcc cggtttggtc atgctaagtt cgttgcgcgc
    10081 gcgctcctca atcgcttcct ggccgccatt gagatcgtca atttcggcaa aaagctgatc
    10141 gttacgcgct ttaagtttgg cgtttgtcgc ctgctgcgcg accacatcat cgttgacgcg
    10201 gctatagtca tgtatgccgt tcttaccgaa ccacagcgag tactgtagcc agaccagtaa
    10261 agccagcaac agcagcgtta gtttacccat cctgccccct gaaaaacggc atcatcatcc
    10321 cataacgtcc tctgtgactc cacattcagg acgggattgc cgcgacaacg ccggcaaatg
    10381 taccacattt gccggatgtt acgtataccc gagtaaggag aacataatct cattgttggt
    10441 tacggtttga attatgaccg gaggcgcagt gataacccgt ctaccctaat agccatatga
    10501 ataacgcgcc gaacagcgcg cctacggcca gtagagtaaa catgatgcta aaaagtattt
    10561 tgccctttac caacagatgc aacgcaatgc cgataatcac cgataccggc attaacgcga
    10621 ggaaaaaggg ccaagtatag aggaaaaaaa acagcgtgtt agggccataa agcagaaaag
    10681 ggatccccaa cgccagcagc catgacacaa agccgaccac cgcccccgga aatgcactgg
    10741 tggcgtcatc gtcgaccatg aaggcgtctg accttgtgaa agtaatgtta tggctattac
    10801 gcatattaaa tcctgtaacc ttgaccatac cgggcataca agcccggtgg tgtctcagga
    10861 tctgataata tcgcgccgtc tcagcaggtc taataattgg gaaaccaaat ttgttactaa
    10921 ttgttcacca ttaagatgaa cctggggcga gtcaggcgct tcgtaaatgg cgtcgatacc
    10981 ggtaaagtta cgcaactcgc ccgcgcgcgc ttttttatac aatcctttag gatcgcgctg
    11041 ttcacagata gccagcggcg tattgacata aatctcgata aaacgatcgt ggccgacgcg
    11101 ctcttttacc agttgccgct cggcgcggtg cggagaaata aatgccgtca aaacaatcag
    11161 gccagcgtcc gccatcagac tggccacttc gcctacccgc cgaatatttt cctggcgatc
    11221 ggcatcgcta aagcctaaat cacggcacaa accgtggcgc acattatcgc catccaacag
    11281 gtaggtactg acgccacgct gatgtaacgc ctcttccagc gcgccggcca ccgttgattt
    11341 tcccgaaccg gagagtccgg taaaccacag caccacgcca cggtggccgt ggagctgttc
    11401 acgagcggcg acagtaacgg gatgagagtg ccagaccacg ttctcatcat gcagcgccat
    11461 gtttatctcc cagcaaatct cgggcgtccc agtgcggaaa atgacggcgt accagcgcat
    11521 tcagctccag ctcaaacgca ctgtattcca cgggcggcgt cgctccgcgt tcatccagtt
    11581 cccgcaccat gccagcaccc acggtaacgt tagaaagtcg gtcgataaaa atcagcccgc
    11641 ccgtcaccgg attttgctga taaatatcca gcgcgagcgg ctcatcgaat gtcatctcta
    11701 ccagaccaat accgtttaac ggcaggctct cgacgtctcg ttgagtcaga ttgttgatat
    11761 caatctgata gcaaatagcc tcgatacgcg cgcgggtttt cttacccgca agtttaacgt
    11821 cgtagctttg gcccggcgcc agcggctgtt ccgccatcca taccacatcg atcgcggcgt
    11881 gccgcgcagg tgccagcgtc tcgtttgccg ccagcagcag atcgccgcgg ctaatatcaa
    11941 tgtcgtcgtt gagtaccagg gtaatggctt cgcccgcaca gacttcttct ttgtcgccat
    12001 caaaagtgac gatacgcgcc acgctggatt ccacgccgga cggcagcact ttaatgcgct
    12061 ctccgacttt gacgctacca gacgccagag tgccggcata cccccgaaaa tcagggttcg
    12121 ggcgattgac gtattgtact ggaaagcgca tcggctgacg gtctaccgca cgctgtatgt
    12181 ctaccgtttc caggacttcc aacagcgtcg ggccgctgta ccagcgcata ttggcgctct
    12241 gcgcggcgac attatcccct tccaacgccg aaagcgggac aaagcgaatg tccagatcgc
    12301 ccggcaactg ttcagcaaag gtcaggtaat cttcgcgaat acgggcgaag gtctcttcgc
    12361 ggtagtcaac gagatccatt ttgttgattg ccaccaccag gtgtttgatc cccaacagag
    12421 tggagataaa gctatggcga cgcgtctgat ccagcacgcc tttacgcgcg tcgatcagta
    12481 ggatcgccag atcgcaggtg gacgctccgg tcgccatatt acgggtatat tgttcatggc
    12541 ccggcgtgtc ggcgataata aattttcgtt tttccgtgga gaaatagcgg tacgcgacgt
    12601 caatagtaat gccctgctca cgctcggcct gcagcccatc taccagcagc gccagatcga
    12661 gtttttctcc ctgcgtgcca tgacgtttac tgtcattatg cagagaagag agctgatctt
    12721 cataaatttg cagggtatcg tgcagcaaac gacctatcag cgtactttta ccgtcatcaa
    12781 cgctgccaca ggttaaaaaa cgcagcaggc ttttgtgttg ttgggcaatc atccaggctt
    12841 cgacgccgcc ttcactggcg atttgttgtg caagtatggt gttcatggcg gctccttaga
    12901 aatacccctg acgtttttta agctccatcg accccgcctg atcgcggtca atcatcctcc
    12961 cctggcgctc gctggtggta gaaaccagca tctcttcgat aatttccggc agcgtttgcg
    13021 cgtgggattc caccgccccg gtgagcggcc aacagccaag tgtacggaag cgcaccatcc
    13081 tttttttgat gacttcgcca ggttggaggt cgatacgatc gtcatccacc atcatcaaca
    13141 tgccatcacg ttccagaacc gggcgttcag cagccaaata cagcggcacg atgtcgatgt
    13201 tttccagcca gatgtattgc cagatatcct gctctgtcca gttggagagc gggaagacgc
    13261 gtatactttc gcctttatta atctgaccgt tatagttacg ccacaactct ggccgctgat
    13321 ttttcgggtc ccagcgatgg aaacggtcac gaaaggagta aatacgttct ttcgcgcggg
    13381 atttttcctc atcgcgccgt gcgccgccga acgcggcatc aaaaccgtac ttattcagcg
    13441 cctgctttaa cccttcggtt ttcataatgt cagtgtgttt agcgctaccg tgaacgaacg
    13501 gattgatgcc catcgccacg ccttctggat ttttatgtac cagcaattcg cagccgtatg
    13561 cgttggcggt acgatcgcga aaggcgtaca tctcacggaa tttccaaccg gtatcaacgt
    13621 gcaatagcgg gaacggtaac gtacccggat aaaacgcctt acgcgccaga tgcagcatga
    13681 cgctggagtc tttaccaatg gagtacagca tgaccggatt agcgaattcc gctgctactt
    13741 cacggataat gtggatactt tccgcctcca gttgccgcag gtgggtgagt cgtttttgat
    13801 ccataaccgt tcctttgcaa taccgttttt tgctaaacat ttcgattaca cgactatagg
    13861 gagcgcggga gagtgaatga aatgacgaat tggaatgagt agttcctcaa aggaataacg
    13921 cggcccaaaa accaatatca aaaaatgctt aacgtaccgg attgccagca tttaggagca
    13981 aatgaaattg tattaacacg atcgcggttt catactagcc ccgtaaaatt ttgttctgta
    14041 tttaaggact cattatgttt tccgcaacgc gccgctttgc cgtcattctg gcgctcggcg
    14101 taggctttat ccttcctgca caagcagcat caccagggcc tggtgaaata gcgaatactc
    14161 aggcacgaca tatcgccacc ttttttcccg ggagaatgac tggctccccc gccgagatgt
    14221 tgtctgccga ttatttacgc caacaattta cccagatggg ataccaaagc gatattcgaa
    14281 cgtttaatag ccgatttatt tataccacga aggataatcg caaaaactgg cataacgtga
    14341 cgggcagtac ggtcatcgcc gcccatgaag ggcgcgtgcc gcagcagatc atcattatgg
    14401 cgcatctgga tacctacgct ccgcagagcg atgctgatgt cgatgccaat ctgggcggtt
    14461 taacgttaca gggaatggat gataatgccg cgggattagg cgttatgctg gaactggcgg
    14521 cgcgtctgaa agatataccg acccattatg ggattcgttt tatcgccacc agcggggaag
    14581 aagagggaaa gctaggcgcg gaaaatttac tcaaacgaat gagtgacgct gagaagaaaa
    14641 atacgctgct ggtgattaat ctcaataacc tgattgttgg ggacaagctc tattttaata
    14701 gcgggaaaaa tacgccggaa gcggtgcgta cactgacccg cgatcgggca ttagcgattg
    14761 cgcgccgtta tggcatcgcc gccaacacca atccgggacg caatccatcc taccccaaag
    14821 gaacgggttg ctgtaatgat gcggaggttt tcgataaagc gggaatatcg gtgctttctg
    14881 ttgaggcgac gaactggaat ctgggtaaaa aagacggata ccagcaacgt gtgaaaaatg
    14941 catccttccc gaacggcaat agctggcacg acgtacggct tgataatcaa cagcatatag
    15001 acaaggcgct gccagggcgg attgagcgcc gtagccgcga tgtagtgcgg ataatgctgc
    15061 cgttggtaaa agagctggcg aaggcggaaa aaacgtcctg atatgctggt gaaacgtgtt
    15121 tatccccgct ggcgcgggga acacggacag caacccgtgt cggatatcag acagatcggt
    15181 ttatccccgc tggcgcgggg aacacacgcg aatcgccaat cgccgccgcg tgaattgcgg
    15241 tttatccccg ctggcgcggg gaacacccac gatgtatgcc gaccgtgatt tttaccgccg
    15301 gtttatcccc gctggcgcgg ggaacacaga tacgccttta cgtcgccctc tttggcgcgc
    15361 ggtttatccc cgctggcgcg gggaacacat taaaaaagat taatgttggt tatagtttta
    15421 cggtttatcc ccgctggtgc ggggaacact aaaacaccgg ttgcgcaacc tccgcgggga
    15481 tcggtttatc cccgctggcg cggggatcgg tttatccccg ctggcgcggg gaacactcta
    15541 aatctaccca attgaattta aatacttttt tagcgcacaa aaaacccacc aacttttcct
    15601 aatttttaaa gatctctaac ttattgattt tcaacaggta gaaacgacac caatcgcagt
    15661 ccatcaagat ctaccggaat acgtcgattt acaccaaaag tctgaaactc aaaacctgat
    15721 tctgtatttg tcgcccacgc cataacaaca tttccctcat ctgccagaac ggaaacctgt
    15781 tgccatatca tctcgcggat ctttgcggaa acatcaccaa catacacacc agctcgaatt
    15841 tccagtaacc agacggccag cctcccccgc agacgaggag gaacattttc ggtaacgaca
    15901 accagcatac tcatcgttag gtactccgat gaccggaatc tcccaacgca acaggaagag
    15961 ggatcgctat ggggtgtgaa tcttcaggag gtaacggcgg ttgaatttcc cctgccgcga
    16021 gaacatcttc aataagagga atcaatttcg ccaatgtttt tccactgcgg aagatatccc
    16081 ggcaggcaat acggacatca cgatcgggct cggcaggatt acgtcgcgca atttcaaatg
    16141 ctttcggtac aacgatctca aatttaatga tatcggcaat atcatagaca aaagaaagcg
    16201 gcttgccggt gtgcacaaat ccaatcgcgg gcgcatatcc ggcagccagt attgccgcct
    16261 ccgttacgcc atagaggcag gaggttgccg agctgataca ctgattaatg acatcgcctt
    16321 tctcccagtc tttcggatcg tagcgacgtc cctgccattt cacgccatac tgcttagcaa
    16381 gtagtgcata ggttgcccgc acacggctcc cctcaatacc acgcaattga tctacagaac
    16441 gacggctcgg cgcgggttcg ccaaaacgta attcaaacat tttacgcacg accttcagcc
    16501 gcaaatcttc atccagtgca agtttcgcct gataaagcaa tttgtcggaa cgggcaccac
    16561 caggctgccc cgaagcgtaa acgcgtacgc ccgcttcccc cccccacacc agtaacgtac
    16621 ccaccgttgc cgcaagtcgc acggcggcat gggaaacccg cgtccccggt tccagcatga
    16681 tgcaggccac cgatccaaca ggaatatggg tacgtacacc cgttttatcg ataagcacaa
    16741 acgcaccgtc gatcacatca atttgtccgt actggagaaa tatcatcgaa acacggtctt
    16801 tcaacgggat gggattcagc ggcagccagc tcatcagcgt ttccttttta ccatcagcat
    16861 tccgcagccc agcgctttac ttttacctaa tccggaaaat aaagcctgtt taaacagtgc
    16921 tgcatcggtg atacagagcg caccgctaaa atcaacgcta ctgaaagtga ttggggtttc
    16981 ctggtcttta cggacaaaac gatgttgctg atacgcttgc acgcatccac aatgcgcctg
    17041 caattcactg tactcgtcac cagcccacat agcgaaatca tcaggttccg gtgcaatcaa
    17101 ccggaaacca tgctgctgcc cttgttgttc cagccacgcc tgcgcggcct gctgttgaag
    17161 ctcccaccac cgttctttct ccacaccatt cgccttcgcc tgatgtttcg cgttcatcat
    17221 cacgtcactg cgcttaccgt tacgggttat caccgggtta gctcgtagtt gaaaatcaag
    17281 ctcaagacca tttgtcagtt gcggattaaa tagtttggtt tcaataagaa acagggagtg
    17341 ctgcaataac ggcggtattg ccgagagcat aaaaaagccg ccatgcgcct cttcgcgaaa
    17401 cagaaactga cgcaattcct gttccggaaa gagctgccat aaccactggt ggctggcata
    17461 aggcctggct gaattccact ttgccaacat ctccggtcgc aaattattaa accggagttg
    17521 aatacgagaa agatacatta tgttctctcc tgcaacggcc cattgaagcg ggtgtagccg
    17581 ccaaactgcc agcgttggcg gctaactggc tggttattgc tatgctgctt ttgttgccag
    17641 accagactct cctcatcagg atcatcccaa taacaaatac cctcacgcag ggtaaatcca
    17701 cttaattccg ctgcggaaat ctcctccaca gcatgagtga atacctcttt taaggtgccg
    17761 gtcattaaac gcgccgctaa cggtaacgcc agcgggcagg attttctccc cagatagagc
    17821 ggaaaatgcg gtgtcagcag cgcctctcgc aattcgctaa gcgaatatgg tgcatcaggc
    17881 gtggcgctta ttgccacatg ccagtagcca tcgcagcgat actctcgctg cgagataagc
    17941 gttcccactt catccgacgc gagagtcagt tcatcccggc gcgtgtaata acgatacttt
    18001 ttgttttctc gcggcgcgct aaccgtgtga taatcccgca accagcgatc ttgtgaagcc
    18061 aacgcgtgca ccgccagatg atagtgccgg ttaaagttat tcagccgcgc ttcttcgtcg
    18121 cgacgaattc ctaacgctgc ggcaagcaga cccaatagcg cagagcgcgt gggaaccgta
    18181 gctgagtggc gaatctcgcc agacgcttcc tccccccacg acgccagcgg cgcataaagc
    18241 tgaaaaacca gatattcctt cattattcat ccttactggc taacaaaggc cagtaattcc
    18301 gccagagatc ccgtaccttc ctgaacgttc aactcacgat aatcgtctgc acagtttcca
    18361 tatacgctat cgaagctggc gcgctgctgt tttaaacggg ttattgccgc aggaatttga
    18421 tcggtatcgc gtaccggctg gaaaaatgcc gccgccagag aacgcggttg tttttgcccg
    18481 acttcggcca acgcataggt ggcataggca cgagaagcga agctgttttg tttaccggtt
    18541 ggcgagacgg ttaacgctgt ttcagtgagt gccgcgatag tacgcttcgc cagttcttcg
    18601 ttaccaccca ggttttccac cagcagatcg cggctgatac agacataggt atagaaaagc
    18661 gccgaggcaa aaccctgctc gcccatatgc ccggaacctg cgtcttcctc tttattattc
    18721 agatcgtcaa cggcggtgaa aaaatcagac tcaacggtca cggcacttac gcccaacgca
    18781 tgggatacct gacaagcagc ctcgacgttg aactcaggcg atgacgccag catacggtca
    18841 aacagcgcca tatctacgct acgctgttct ttgcgcagaa gcttcacttc ttcatcgtta
    18901 ggttcgcgtt tgtcggcaat tagcgtatca accagttgtt taatcaaact aatttcatgg
    18961 ttactgacgt gaacgatctg ctcaatttcg agattttttt ccggtttcgc atctttatca
    19021 cttttaagct tgccaaattg cttagcgatt aactcagacg aactcttagc aattttttct
    19081 tcaattccgg catctttcat cggacgataa acataatcca cgccaattcg acgagtacgc
    19141 ttacccataa agccatccat tgccgcttca aaagtttccg acacccgcca ggcacgcttc
    19201 agactttgcg acgatacgcg taaacgctca actcctccca taaacgcggt cttcggtctg
    19261 ccagactcat cacgattcag gttagcgggc gcataagcag tcaataaatg cagttgaata
    19321 aaagttgtca ttatcaaatc cttctaaaaa tgattatttg ccacgcgacg tggaaagata
    19381 ttcgttcgcc caacggatgc gacttcgttc aaaggggtta cggaattccg gctgatggtt
    19441 ttcgcgtcgt tgccactctt ccatccacag gaaaatgcca tcggcaagtg aaagaacatt
    19501 caccccctcc gtaccgcgaa tcttcactgc ctgaatcaac aactggcaaa atgtttccgg
    19561 gtcggacgct ttttgcaaac gttcaaaacg cagaccagaa acgcacgacg tggaaccttt
    19621 aagcttttcc cctaactgcg cagcgaaact aatattctcc ttatgactct taatatgcac
    19681 agcgacgctg acaaacagag ccagagccat ctcatcaaga ggttgcagtc gcatatgttt
    19741 aagcagagcc tggcggagag cgtcatgtcc ttcacatatc attacgccat atggcggcgc
    19801 cattcttttc aactcagccc gccaggcgcg accgttgact cgtttaccat ccttgcgctc
    19861 ataacgctca gacagcgtag caaaccagtc aagtagtgcc ttctgcgcat cggggtggag
    19921 aattctgcat aacactgctg tattgctatt cagcatattt ggcttccttc tgttattcga
    19981 ccagcgccaa cacatccttg cgcgctttat gtttacgata gctgctggct aaatcctgtc
    20041 gggccgtcag ctggcgctgc aggatatcgt ccgggcagtc ggggttggtc agggcatcac
    20101 ggtcaaaaac gtgaaataga tagtgtgcta attccgcctc ccactgactt actgcgtgac
    20161 gagtctgtgt atcctgccga agcggatcga cagccagcgc ctcttgcaac gtccgaaaag
    20221 cgggttcggt ttcctgccag aaggcgatat ccaccatact aaaatccatt ttggcttctt
    20281 tcggacaatc gaatttggcg ctctttaacg cgttccgtaa cagcgacagc gactcactag
    20341 ccagcaccag cacaatgtta agcgcagcga gaaattgctc ttcgtgcgaa acgctaatga
    20401 gcggaattcg gtgctgatac cagcagcgga ccttggcctt attcatatcc caggcaaagc
    20461 accacaggct cattttgttc cgctgaccag cggcacgaac gacctttgca ggctgcattt
    20521 tgttgaactt atcctcacga ttgagcatca gccccaacca gtctttataa cttaacccgc
    20581 ccggctgccc tttaaacgcc agccagggtg cggatggatc tttcaatgcc tgccgatatg
    20641 gggagaaggg atgtagccaa ctgtcgtact gaacgccata atttttacta cgcatttgca
    20701 gtagcagtga ttcgtgatgc tccccgcaca aatcgcagat acctgccaca gtgtgggtga
    20761 aatccagttc tatgcgccgc ggcatccccc agtaggcttg caaggggtgc gcattatccg
    20821 gtgtgaccac attccccgct ttttcgctgg ttttcgtcgg cgcaagccag ggaaaaatga
    20881 gtggatgctg tgtaacattc ggcggctctt cctgcggcaa aacgttaagc caaagttttt
    20941 tccatagtgg atatttatct tcttcctgcg gtaccaccag cgtagtcagc ggaccaccgc
    21001 cgcgcatccc tacccggtaa cccgccccgc cggcaggtga attggtttga atcgcaaata
    21061 gcgctatcgc cgcgcagtga ggacatattt gttctacgtt gccacgtttt acaaaatgat
    21121 ctttattgag cttgagcgca ttcccgcccg gcgcatccac cagcagcccg gcaatagaac
    21181 catattcact atcgagagga tcaaaacttt gcaggaagga aggtttttgc tcgccgaact
    21241 gtagagccag agaaatcgta tttaacgcct tctcccattg ttcgaattcg atactttcat
    21301 gccagatatc tgcccattct tctttatctt ccggcgcgac ggtacattgt aaaataccaa
    21361 tcagcatttg ccatgccgcc ccctgaaagt cagcccgagg ataggcaaga tcctgaatgc
    21421 ggttatccag aagatcgcgt aatgatattt tctttttatc gccgtttgag aatatgacgg
    21481 gaagccattt ctctttggtt aaatccatac ctttactcct gcagggctat ttattaagcc
    21541 aatttggaat attacctacc tataggtaga ttccgtcctg aggtatctct taaatactgt
    21601 catcggagtt atactacatt ttctcgaaga cgaaaatata aataaaaagt agatacagtc
    21661 ttaaatcaga ctatgtattt tttatagtta tctgttatct ttaatacgtt ccctaaaatt
    21721 atgggataaa ccgtagatgc agtcttaata gcgcagcgtt ccccgcgcca gtggggataa
    21781 cctaatccag acaaaaaaac tggccaatta cccgtatccc aatttattat cgatttcatt
    21841 gtaatccccc tcctacagaa aaaagatgac acagatagaa tatctggact acctctgcta
    21901 ttgggggaaa acagataaat caacagaaaa cataacctgt aattatcatt tactggcata
    21961 ccattgcctg gacgttgctg catgcgggga atacataata aaaaacaata cattcaattc
    22021 atgtaatata ttaaaagaat gtaatatctc aggtacaaat gcagaaaact ggataatctg
    22081 gtttcttgcc agccacgata tcggaaaatt cgccagagga tttcaaaaat acgccgaatt
    22141 cccagactct cccttagtct ctcccattag cggtgtttcc gcatttgaga gacatgattc
    22201 cttaggcttc tatttatggg gtaaattatt tgaagcgtgg agttcaggta gtaatgaaat
    22261 tatcgcaggc attgaaccag aaaatcgcgc taggtttgaa agcgctttaa atagctggat
    22321 gcttattagc accgggcacc atggcatccc gccggacacc atgaaaaata gaagctcgct
    22381 ggcattcacc gatgaagaca ttgtcgcagc aacgcattat ctggaagcat taagtgaatt
    22441 attccctttc actctacctc aggaatggaa aaccaaagca gggagaaaat gtttaaaaca
    22501 gcacagttgg tttttcgctg ggcttgtcac cctcgccgac tggatgggct cggatgaaag
    22561 ccagtttcca ctgctcagca gcgccatgcc attgaaagat tattggcctc tcgcttgtga
    22621 aaaagcccaa caggccatcc tccgaatgcc gccgttatct cagcacagcc attatcaaga
    22681 tcaccgggca ttatttccgt tcattcagac gctcacccct cttcagcaac gagcaagcga
    22741 actggatatt tcagcacccg gtgcacagct ggttgtcctg gaagacgtta ccggagcagg
    22801 caaaacagag gccgcactga ttctgactca ccgcttaatg tcagccaata aaggccacgg
    22861 tctctacgtt gggttgccga caatggccac cgcaaacgcc atgtatcagc gcctggcatc
    22921 ggcttatcat gcgctattta ccgatgagtc caggccatcg ctcatcctgg cacacggtgg
    22981 gcgagaaatg tcggactctt tccgacaatc catctggcag ccaacagaaa atatagctga
    23041 agattatgcc cgtgatgatg gcaacgcgac tactgagtgc catacctggt ttgcagattc
    23101 acgcaaaaaa gcgctgctgg cggaagtcgg cgtaggtacg ctggatcaac tcttaatggc
    23161 ggtgatgcct tttcgccatc aatcgctccg attgctaggg atgcgcgaca aaatcctgct
    23221 gctggatgaa gtgcacgcct atgatggtta tatggttaaa ttgctggaag gtttattgcg
    23281 cttccatgcc gcccagggcg gtagcgctat tattctgagc gccactcttc ccgccgcttt
    23341 acgggaaaaa ttacttaatg cgtttagcga tggcgcggaa tttatgagcg ctggtggtag
    23401 cgataacgcg ggttatccat ggttaagcca cctcacttcc tccggtctgt tagagcaacc
    23461 actggccaca cgtcccgaag tccaaaggac tgtagccgtt aattggatac agcagcgcca
    23521 ggaagcactg gacattattt atcgcgttgt ggcaaccgga cagtgcattt gttggatccg
    23581 caacacggtt gatgatgcgc tggacactta ccagcagttg ctacacgagg gaatcgttcc
    23641 agagcaggat cttttgcttt tccacagccg ttttgctttt atcgatcgta ttgctattga
    23701 aaataaaacg ttaaactggt ttggtaacaa tgcccccgtt tctgaacgac gtggtaaggt
    23761 attaatcgcc acacaagtcg ttgaacaaag tctcgatctg gactttgact ggatgatcac
    23821 cgatctggcg ccgattgatt tattgatcca gcgcgccggt cgcctgcaac gccatatccg
    23881 cgatgcccat gggcaacgaa aatctacgct tccggatgaa cgccagccac cagtattgca
    23941 tatttctggc ccctcactgg caggagcagg cagaagaggg ctggttgggg caagagctaa
    24001 aaggtaccgg ctttgtttac accgatcatg cctgcctgtg gcgtacccag gcgctgctgc
    24061 gtcaacatgg tgagatccgt atgccggata atgccagagc actcgttgac ggcgtatacg
    24121 agcagaaaat tgctgcgcca gcaggcttgc agacgatctc tgacgttgcc tttggcaaag
    24181 tccttagcca acgttcagtg gctgcgcaaa atttattacg ttacgatctc ggttacgatc
    24241 gagaagccag cgacttttta tgggataaag atagagaatt ttctacccgt ctgggtgaag
    24301 agagtgttga tgtttatctc gccagaaaag acattgatgg acagctacgc cctttagttg
    24361 atgaaataga tttctgctgg gaaaaaagtc gcttatccgt ccgaaaatca tggtggcaaa
    24421 aaaattctgg tacattccaa tgtccagatg aggaaacatt agcctgtttc agaaaacgcc
    24481 accatcgccc ttccggacag attgtgctgg tatctgatac cggagaagct agctattaca
    24541 gtaaacgttt tggattggtt ggataacggg tattattcta actccgttgt atagagaagt
    24601 tattacatta gattcactaa aatctttgta gcttctctat ctatatccat ttccatgaat
    24661 acccttaatt aaatttaact acttcatttc atcatacttt atctctcagc atcaacacca
    24721 tccatgacaa accaaaattt taaaaaaacg accatttgcg gcgaatcatc taccttttgt
    24781 ctgaattatc gtcaccacaa aggattacca accataaatg tgctgtattg ataatgccgt
    24841 tcacattctc tcctgtagta aaccttgtct gtttaataaa aaagagcgaa ttgaacgata
    24901 tattttactc cggatattga ataatataaa tttgaaggaa aatattatgc cagtcacttt
    24961 aagcttcggt aatcatcaaa attatacgct taatgaaagt cggcttgctc atctgttaag
    25021 cgcagataaa gaaaaagcaa tccatatggg gggctgggat aaagtccagg atcattttag
    25081 agcggaaaaa aaggaccatg cgctggaagt gttacactcc atcattcacg ggcagggccg
    25141 tggtgaacct ggagagatgg aagttaacgt agaggatatc aataaaattt acgcctttaa
    25201 acggctacaa catctggcct gcccggctca tcaggatctg tttactatca agatggacgc
    25261 ttctcagaca caatttttac ttatggtcgg cgacacggtg atcagccaaa gcaatattaa
    25321 ggacatcctc aatatatcag atgatgcagt gatagaatct atgagtagag aagagagaca
    25381 gttattttta caaatatgcg aggtgattgg tgcgaagatg acctggcacc cggaattact
    25441 tcaggagtcg atttctactc tacgaaaaga agtgacgggc aatgcacaaa tcaaagcggc
    25501 ggtttatgag atgatgcgtc ccgcagaggc tccagaccac ccgcttgtcg aatggcagga
    25561 ctcgcttact gaagatgaaa aatcgatgct ggcctgtatt aatgccggta actttgagcc
    25621 tacaactcag ttttgcaaaa taggttatca ggaggtacaa ggtgaagtcg cttttagcat
    25681 gatgcatccg tgcatctcct atttactaca tacctattca ccgtttgcag agtttaaacc
    25741 aacaaattcc ggttttttaa aaaaacttaa tcaggattat aacgactacc atgcaaaaaa
    25801 aatgtttatt gatgtaattc ttgaaaagct atatctaacg catgaacgtt ctttgcacat
    25861 tggtaaagat gggtgcagtc gtaatatatt actgacataa agatagccag taatataacc
    25921 aatttaaaat ccggctgcct gccggatttt acatagcagc aagtataatc ataccgcgta
    25981 aggacaatta cccttcatgc agcccgcact cacgtttcag tccgaagaag cgtgtctctt
    26041 cttccgccat acccggctcc catttgcggg tggtgtgcgt atcgcccacc gacagatagc
    26101 cctgagccca cagcggatgg tatttcagac cgtgcttttg cagatactgg taaaccgtgc
    26161 ggttatccca gtcgataatc ggtagcactt taaacacgcc gcgctggata gcgagaacgg
    26221 gtaaatgcgc gcggctaccg gactgctcgc gacgcagacc cgcaaaccag gtctgcgcgt
    26281 ttaactcttt gagcgcccgg ttcatcggct cgactttgtt gatctcattg tatttctcaa
    26341 tgccctcaac gccctgctcc cacagcttgc cgtagcgcgc ttcctgccag gccggacttt
    26401 cgcccgcgcg gtaaactttc aggttgagtt tgagtttgtc cgttagctca tcaataaact
    26461 gataggtttc cgggaacaaa tagccggtat cggtgaggat caccgggata tccgggcgaa
    26521 tctggttcac caggtgcagg ctcaccgccg cctggatacc aaagcttgag gagagcacgt
    26581 attcgccggg cagattttcc agcgcccaag ccacgcgttc ttcggcagtc agcgtttcca
    26641 gttgagcgtt ggtttccgcc aacgccagta cgcgatcgac ttttggcagt tcattcaatg
    26701 cgttgagatc gagttgggac ataagttcct cactgtttgc cttgcctgat ggcgctgtgc
    26761 ttatcaggcc tacacagacg ccatccggca attcaggtta ttcccagaaa tcacgcgcgg
    26821 gatcgagcac cgggcgaatg atgcccgcac gcaccgtaaa gtcgccgaag ccttcacccg
    26881 cttcacgctc tttcgcccag cgcccaatca gttcatccag cgaagcctga atatccggct
    26941 cggtgatatt ttcttgatac atccgtggaa tacgactccc gatgcggttg ccgccaagat
    27001 gcaggttata acgaccaggc gctttcccta ctaagccaat ttccgccagc atcgcgcgac
    27061 cacagccgtt cgggcagccg gtcacgcgca tcacgatatg ctcatcagga atgccgtgtt
    27121 tttccagaat cgcttccact ttgtcagtaa acgacggtag gaaacgctcg gcttccgcca
    27181 tcgccagcgg gcaggtcggg aacgacacgc aggccattga gttttcacgc tgcgcgctca
    27241 ccgcattcat cagcccatga tcgcgcgcca gtttctcgat cttcgctttc tggctttccg
    27301 gcacgctggc aataatcagg ttctggttag cggtaatacg gaactcgccc tgatgaatct
    27361 tcgcgatctc cagcaggccg gttttcagcg gacgccccgg atagtccagg atacgaccgt
    27421 tttcgataaa cagcgtcagg tgccatttat catcaatgcc tttcacccag ccaatcctgt
    27481 cgccacgccc ggtaaattca tacggacgaa tgggttcaaa tgtgatcccc gcgcgacgct
    27541 cgacttccgc tttaaacgtc tccagtccca cacgctcaag ggtgtatttg gttttggcgt
    27601 ttttacggtc ggtacggtta ccccagtcgc gctgcgtagt caccaccgct tccgccaccg
    27661 ccagggtgtg ctccagcggc agatagccaa actcgctcgc ggtacgagcg taggttttct
    27721 tattaccgtg ctcaatagac agaccgccgc ccaccagcag gttaaagccg accagcttgc
    27781 cgttctcggc aatcgccacg aagttcatgt cgttggcgtg cagatcgata tcgttttgcg
    27841 gcgggatcac taccgtggtt ttgaacttac gcggcagata ggtctgtccg aggatcggct
    27901 cttcatcggt ggtcgccacc ttctcctgat cgagccagat ctccgcatac gcacgagtgc
    27961 gcggcagcag atgttcggag atcttcttcg cccattcgta ggcttccgcg tgcagctcgg
    28021 actcatacgg gttagaggta cacagcacgt tacggttcat atcgttggcg gtcgccagcg
    28081 cgtccagccc caccgaatgc agcatctggt gcaccggctt aacgttcttc ttcagaatac
    28141 cgtggaactg gaaggtctga cggttggtca gacggatact gccataaatc gtgttatccg
    28201 ccgcgaattt atcgatcgcc tgccattgcg tcgtagt
//
LOCUS       DAGWFR010000039        28017 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.040, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000039 DAGWFR010000000
VERSION     DAGWFR010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 28017)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28017)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28017
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.040"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..1976
                     /locus_tag="MOX77_001735"
     CDS             <1..1976
                     /locus_tag="MOX77_001735"
                     /EC_number="1.7.99.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="nitrate reductase subunit alpha"
                     /protein_id="HCA3357289.1"
                     /translation="QPLAFALDWQRPARHMNSTSYFYNHSSQWRYETVTAEELLSPMA
                     DKSRYSGHLIDFNVRAERMGWLPSAPQLGTNPLYIAREAEKAGMTPVDYTVKSLKDGS
                     IRFAAEQPENGKNHPRNLFIWRSNLLGSSGKGHEYMLKYLLGTEHGIQGLDLGKQGGV
                     KPEEVEWRDNGLDGKLDLVVTLDFRLSSTCLYSDIVLPTATWYEKDDMNTSDMHPFIH
                     PLSAAVDPAWESKSDWEIYKGIAKKFSEVCVGHLGKETDVVTLPIQHDSAAELAQPLD
                     VKDWKKGECDLIPGKTAPHIMTVERDYPATYERFTSIGPLMEKIGNGGKGIAWNTQSE
                     MDLLRKLNYTKADGPAKGQPMLNTAIDAAEMILTLAPETNGQVAVKAWAALSEFTGRD
                     HTHLATNKEEEKIRFRDIQAQPRKIISSPTWSGLEDEHVSYNAGYTNVHELIPWRTLS
                     GRQQLYQDHQWMRDFGESLLVYRPPIDTRSVKAVMGRKSNGNPEKALNFLTPHQKWGI
                     HSTYSDNLLMLTLSRGGPIVWMSETDAKELGIEDNDWIEVFNSNGALTARAVVSQRVP
                     AGMTMMYHAQERIVNLPGSEITQQRGGIHNSVTRITPKPTHMIGGYAQLAYGFNYYGT
                     VGSNRDEFVVVRKMKNINWLDGEGNDQVQESVK"
     gene            1973..3508
                     /gene="narH"
                     /locus_tag="MOX77_001736"
     CDS             1973..3508
                     /gene="narH"
                     /locus_tag="MOX77_001736"
                     /EC_number="1.7.99.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase subunit beta"
                     /protein_id="HCA3357290.1"
                     /translation="MKIRSQVGMVLNLDKCIGCHTCSVTCKNVWTSREGMEYAWFNNV
                     ESKPGVGFPNDWENQEKWKGGWIRKINGKLQPRMGNRALLLGKIFANPHLPGIDDYYE
                     PFDYDYQNLHTAPESKHQPIARPRSLITGQRMDKITSGPNWEEILGGEFEKRAKDQNF
                     ENMQKAMYGQFENTFMMYLPRLCEHCLNPACVATCPSGAIYKREEDGIVLIDQDKCRG
                     WRMCITGCPYKKIYFNWKSGKSEKCIFCYPRIEAGQPTVCSETCVGRIRYLGVLLYDA
                     DAIESAASTENEKDLYQRQLDVFLDPNDPAVIEQALKDGVPQSVIDAAQQSPVYKMAM
                     DWKLALPLHPEYRTLPMVWYVPPLSPIQSAADAGELGSNGILPDVDSLRIPVQYLANL
                     LTAGDTQPVLLALKRMLAMRHYKRAETVDGKVDTRALEEVGLSEAQAQEMYRYLAIAN
                     YEDRFVVPSSHRELARDAFPEKSGCGFTFGDGCHGSDTKFNLFNSRRIDAVDVTSKTE
                     PHA"
     gene            3505..4215
                     /gene="narJ"
                     /locus_tag="MOX77_001737"
     CDS             3505..4215
                     /gene="narJ"
                     /locus_tag="MOX77_001737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase molybdenum cofactor assembly
                     chaperone"
                     /protein_id="HCA3357291.1"
                     /translation="MIELVIVSRLLEYPDAALWQHQQELFDALASSENLDKEDAQTLG
                     VFLRDLTAQDMLDVQAAYSELFDRGRATSLLLFEHVHGESRDRGQAMVDLMAQYEQHG
                     LQLDSRELPDHLPLYLEYLAQLPKSEALGGVQDIAPILALLSARLQQRDSRYAVLFDL
                     LLKLANTVIDSGKVAEKIANEARDDTPQALDAVWEEEQVKFFADQGCGESEISAHQRR
                     FAGAVAPQYLNITTGGQH"
     gene            4215..4892
                     /gene="narI"
                     /locus_tag="MOX77_001738"
     CDS             4215..4892
                     /gene="narI"
                     /locus_tag="MOX77_001738"
                     /EC_number="1.7.99.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="respiratory nitrate reductase subunit gamma"
                     /protein_id="HCA3357292.1"
                     /translation="MHFLNMFFFDIYPYIAGSVFLIGSWLRYDYGQYTWRAASSQMLD
                     RKGMNLASNLFHIGILGIFAGHFLGMLTPHWMYEAFLPVDVKQKMAMIAGGACGMLTL
                     VGGILLLKRRLFSPRVRATTTGADILILSLLVIQCALGLLTIPFSAQHMDGSEMMKLV
                     GWAQSVVTFHGGASAHLDGVAFIFRMHLVLGMTLFLLFPFSRLVHIWSVPVEYLTRKY
                     QIVRARH"
     gene            5134..6663
                     /locus_tag="MOX77_001739"
     CDS             5134..6663
                     /locus_tag="MOX77_001739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HCA3357293.1"
                     /translation="MRFSSIFKIIILNIFISKMAHAAVCEERYPPDSEECQYVQELEQ
                     KAEQGDEGAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGEN
                     FPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDA
                     GVVRGQGSASSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFY
                     GEGVPQDYRQAVYWLNEGIPGSYTPGHIPLNALYDKAHPADQVHSQTWYRKTAQRVMA
                     KVQFNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEAVSQDYQQ
                     ALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGV
                     AYSMGRGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYM
                     ASIYTEKSKDDCSALIAERNRLKGTLTPDQLSETYAAFDLIRRKINQSKEAKKIARKK
                     Y"
     gene            complement(6766..6897)
                     /locus_tag="MOX77_001740"
     ncRNA           complement(6766..6897)
                     /ncRNA_class="other"
                     /locus_tag="MOX77_001740"
                     /product="RtT sRNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00391"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="rtT sRNA, processed from tyrT transcript; Derived
                     by automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF00391"
     gene            complement(6948..7099)
                     /locus_tag="MOX77_001741"
     tRNA            complement(6948..7099)
                     /locus_tag="MOX77_001741"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(7063..7065),aa:Tyr,seq:gta)
     gene            complement(7128..7269)
                     /locus_tag="MOX77_001742"
     ncRNA           complement(7128..7269)
                     /ncRNA_class="other"
                     /locus_tag="MOX77_001742"
                     /product="RtT sRNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00391"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="rtT sRNA, processed from tyrT transcript; Derived
                     by automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF00391"
     gene            complement(7440..8282)
                     /gene="purU"
                     /locus_tag="MOX77_001743"
     CDS             complement(7440..8282)
                     /gene="purU"
                     /locus_tag="MOX77_001743"
                     /EC_number="3.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formyltetrahydrofolate deformylase"
                     /protein_id="HCA3357294.1"
                     /translation="MQSLQRKVLRTICPDQKGLIARITNICYKHELNIVQNNEFVDHR
                     TGRFFMRTELEGIFNDSTLLADLDSALPEGSVRELNPAGRRRVVILVTKEAHCLGDLL
                     MKANYGGLDVEIAAVIGNHETLRSLVERFEIPFELVSHEGLTREEHDTKMADAIDTHQ
                     PDYVVLAKYMRVLTPGFVARFPNKIINIHHSFLPAFIGARPYHQAYERGVKIIGATAH
                     YVNDNLDEGPIIMQDVIHVDHTYTAEDMMRAGRDVEKNVLSRALYQVLAQRVFVYGNR
                     TIIL"
     gene            complement(8333..8791)
                     /locus_tag="MOX77_001744"
                     /pseudo
     CDS             complement(8333..8791)
                     /locus_tag="MOX77_001744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460714.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YchJ family protein"
     gene            8900..9805
                     /gene="rssA"
                     /locus_tag="MOX77_001745"
     CDS             8900..9805
                     /gene="rssA"
                     /locus_tag="MOX77_001745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase RssA"
                     /protein_id="HCA3357295.1"
                     /translation="MRKMKIGLALGSGAARGWSHIGVIKALKQTGIDIDIVAGCSIGS
                     LVGAAYACNKLSALEQWVCSFRYWDVLRLMDVSWGRGGLLRGKRVFNHYRDIMPVTDF
                     DHCSRRFGAVATNLSTGRELWFTEGDLHLAVRASCSMPGLMSPVEHNGYWLVDGAVVN
                     PVPVSLTRALGADIVIAVDLQHDAHLMQQDLLSVNVGNINEESDDALPWHKRLKERFS
                     SLTSRRGVSSSGAMEIMTTSIQVLENRLKRNRMAGDPPDILIQPFCPQISTLDFHRAH
                     AAIAAGQLAVEKKMDELIPLVRTDV"
     gene            9896..10909
                     /gene="rssB"
                     /locus_tag="MOX77_001746"
     CDS             9896..10909
                     /gene="rssB"
                     /locus_tag="MOX77_001746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator RssB"
                     /protein_id="HCA3357296.1"
                     /translation="MTQPLVGKQILIVEDEPVFRSLLDSWFSSLGATTALAGDGVDAL
                     ELMGRFTPDLMICDIAMPRMNGLKLVENLRNRGDQTPILVISATENMADIAKALRLGV
                     EDVLLKPVKDLNRLRETVFACLYPNMFNSRVEEEERLFRDWDAMVSNPTAAAQLLQEL
                     QPPVQQVISHCRINYRQLVSADQPGLVLDIAPLSDNELAFYCLDVTRAGDNGVLAALL
                     LRALFNGLLQDQLGQQKHRLPELGALLKQVNHLLRQANLPGQFPLFVGYYHSELKNLI
                     LVSAGLNATLNTGAHQVQISSGVPLGTLGNAYLNQLSQRCDSWQCQIWGAGGRLRLML
                     SAE"
     gene            11112..12020
                     /gene="galU"
                     /locus_tag="MOX77_001747"
     CDS             11112..12020
                     /gene="galU"
                     /locus_tag="MOX77_001747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HCA3357297.1"
                     /translation="MAALNSKVKKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQY
                     VVNECIAAGITEIVLVTHSSKNSIENHFDTSFELEAMLEKRVKRQLLEEVQSICPPHV
                     TIMQVRQGLAKGLGHAVLCAHPVVGNEPVAVILPDVILDEYESDLSQDNLAEMIRRFD
                     ETGNSQIMVEPVEDVTAYGVVDCKGVELAPGESVPMVGVVEKPKADVAPSNLAIVGRY
                     VLSADIWALLAKTPPGAGDEIQLTDAIDMLIEKETVEAYHMKGKSHDCGNKLGYMQAF
                     VEYGIRHNSLGAEFKAWLEEEMGIKK"
     gene            complement(12152..12565)
                     /gene="hns"
                     /locus_tag="MOX77_001748"
     CDS             complement(12152..12565)
                     /gene="hns"
                     /locus_tag="MOX77_001748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator H-NS"
                     /protein_id="HCA3357298.1"
                     /translation="MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEE
                     SAAAAEVEERTRKLQQYREMLIADGIDPNELLNSMAAAKSGTKAKRAARPAKYSYVDE
                     NGETKTWTGQGRTPAVIKKAMEEQGKQLEDFLIKE"
     gene            13228..13845
                     /gene="tdk"
                     /locus_tag="MOX77_001749"
     CDS             13228..13845
                     /gene="tdk"
                     /locus_tag="MOX77_001749"
                     /EC_number="2.7.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine kinase"
                     /protein_id="HCA3357299.1"
                     /translation="MAQLYFYYSAMNAGKSTALLQSSYNYQERGMRTVVYTAEIDDRF
                     GAGKVSSRIGLSSPAKLFNQNTSLFEEIRAESARQTIHCVLVDESQFLTRQQVYQLSE
                     VVDKLDIPVLCYGLRTDFRGELFVGSQYLLAWSDKLVELKTICFCGRKASMVLRLDQD
                     GRPYNEGEQVVIGGNERYVSVCRKHYKDALEEGSLTAIQERHRHI"
     gene            complement(14042..16720)
                     /gene="adhE"
                     /locus_tag="MOX77_001750"
                     /gene_synonym="adhC"
     CDS             complement(14042..16720)
                     /gene="adhE"
                     /locus_tag="MOX77_001750"
                     /gene_synonym="adhC"
                     /EC_number="1.1.1.1"
                     /EC_number="1.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional acetaldehyde-CoA/alcohol
                     dehydrogenase"
                     /protein_id="HCA3357300.1"
                     /translation="MAVTNVAELNALVERVKKAQREYASFTQEQVDKIFRAAALAAAD
                     ARIPLAKMAVAESGMGIVEDKVIKNHFASEYIYNAYKDEKTCGVLSEDDTFGTITIAE
                     PIGIICGIVPTTNPTSTAIFKSLISLKTRNAIIFSPHPRAKEATNKAADIVLQAAIAA
                     GAPKDLIGWIDQPSVELSNALMHHPDINLILATGGPGMVKAAYSSGKPAIGVGAGNTP
                     VVIDETADIKRAVASVLMSKTFDNGVICASEQSVVVVDSVYDAVRERFASHGGYMLQG
                     QELKAVQNVILKNGALNAAIVGQPAYKIAELAGFSVPETTKILIGEVTVVDESEPFAH
                     EKLSPTLAMYRAKDFEEAVEKAEKLVAMGGIGHTSCLYTDQDNQPERVAYFGQMMKTA
                     RILINTPASQGGIGDLYNFKLAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKRAEN
                     MLWHKLPKSIYFRRGSLPIALDEVITDGHKRALIVTDRFLFNNGYADQITSVLKAAGV
                     ETEVFFEVEADPTLSVVRKGAELANSFKPDVIIALGGGSPMDAAKIMWVMYEHPETHF
                     EELALRFMDIRKRIYKFPKMGVKAKMIAVTTTSGTGSEVTPFAVVTDNATGQKYPLAD
                     YALTPDMAIVDANLVMDMPKSLCAFGGLDAVTHALEAYVSVLASEFSDGQALQALKLL
                     KENLPASYHEGSKNPVARERVHSAATIAGIAFANAFLGVCHSMAHKLGSQFHIPHGLA
                     NALLICNVIRYNANDNPTKQTAFSQYDRPQARRRYAEIADHLGLSAPGDRTAAKIEKL
                     LAWLESIKAELGIPKSIREAGVQEADFLAHVDKLSEDAFDDQCTGANPRYPLISELKQ
                     ILLDTYYGRDFTEGEVAAKKDVVAAPKAEKKAKKSA"
     gene            17197..17844
                     /locus_tag="MOX77_001751"
     CDS             17197..17844
                     /locus_tag="MOX77_001751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YchE family NAAT transporter"
                     /protein_id="HCA3357301.1"
                     /translation="MIQPLFDFPVYFKFFIGLFALVNPVGIIPVFISMTSYQTATARN
                     KTNLTANLSVAIILWSSLFLGDGILQLFGISIDSFRIAGGILVVTIAMSMISGKLGED
                     KQNKQEKSETAIRESIGVVPLALPLMAGPGAISSTIVWGTRYHSIAHLLGFSVAIALF
                     ALCCWGVFRMAPWLVRLLGQTGINVITRIMGLLLMALGIEFIVTGIKGIFPGLLN"
     gene            18620..20251
                     /gene="oppA"
                     /locus_tag="MOX77_001752"
     CDS             18620..20251
                     /gene="oppA"
                     /locus_tag="MOX77_001752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001675662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter substrate-binding
                     protein OppA"
                     /protein_id="HCA3357302.1"
                     /translation="MSNITKKSLIAVGILTAFIAASAATAADVPAGVQLADKQTLVRN
                     NGSEVQSLDPHKIEGVPESNVSRDLFEGLLISDVEGHPSPGVAEKWENKDFKVWTFHL
                     RENAKWSDGTPVTAHDFVYSWQRLADPNTASPYASYLQYGHIVNIDDIIAGKKPATDL
                     GVKALDDHTFKVTLSEPVPYFYKLLVHPSVSPVPKSAVEKFGDKWTQPANIVTNGAYK
                     LKNWVVNERIVLERNPQYWDNDKTVINQVTYLPISSEVTDVNRYRSGEIDMTYNNMPI
                     ELFQKLKKEIPNEVRVDPYLCTYYYEINNQKAPFNDVRVRTALKLALDRDIIVNKVKN
                     QGDLPAYSYTPPYTDGAKLVEPEWFKWSQQKRNEEAKKLLAEAGFTADKPLTFDLLYN
                     TSDLHKKLAIAVASIWKKNLGVNVNLENQEWKTFLDTRHQGTFDVARAGWCADYNEPT
                     SFLNTMLSDSSNNTAHYKSPAFDKLIADTLKVADDTQRSELYAKAEQQLDKDSAIVPV
                     YYYVNARLVKPWVGGYTGKDPLDNIYVKNLYIIKH"
     gene            20373..21293
                     /gene="oppB"
                     /locus_tag="MOX77_001753"
     CDS             20373..21293
                     /gene="oppB"
                     /locus_tag="MOX77_001753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter permease OppB"
                     /protein_id="HCA3357303.1"
                     /translation="MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGERALPPE
                     VLANIEAKYHLNDPIMTQYFSYLKQLAHGDFGPSFKYKDYTVNDLVAASFPVSAKLGA
                     AAFLLAVIIGVSAGVIAALKQNTRWDYTVMGFAMTGVVIPSFVVAPLLVMVFAITLQW
                     LLGGGWNGGALKFMILPMVALSLAYIASIARITRGSMIEVLHSNFIRTARAKGLPMRR
                     IIFRHALKPALLPVLSYMGPAFVGIITGSMVIETIYGLPGIGQLFVNGALNRDYSLVL
                     SLTILVGALTILFNAIVDVLYAVIDPKIRY"
     gene            21308..22215
                     /gene="oppC"
                     /locus_tag="MOX77_001754"
                     /pseudo
     CDS             21308..22215
                     /gene="oppC"
                     /locus_tag="MOX77_001754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000979653.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter permease OppC"
     gene            22227..23234
                     /locus_tag="MOX77_001755"
     CDS             22227..23234
                     /locus_tag="MOX77_001755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCA3357304.1"
                     /translation="MSLSETATQAPQPANVLLEVNDLRVTFATPDGDVTAVNDLNFTL
                     RAGETLGIVGESGSGKSQTAFALMGLLATNGRIGGSATFNGREILNLPERELNTLRAE
                     QISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKIPEARKRM
                     KMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNT
                     AIIMITHDLGVVAGICDKVLVMYAGRTMEYGKARDVFYQPVHPYSIGLLNAVPRLDSE
                     GAEMLTIPGNPPNLLRLPKGCPFQPRCPHAMEICNNAPPLEAFSPGRLRACFKPVEEL
                     L"
     gene            23231..24235
                     /gene="oppF"
                     /locus_tag="MOX77_001756"
     CDS             23231..24235
                     /gene="oppF"
                     /locus_tag="MOX77_001756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016506804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein tripeptide/oligopeptide ABC transporter
                     ATP binding protein OppF"
                     /protein_id="HCA3357305.1"
                     /translation="MNAVIEQRKVLLEIADLKVHFDIKEGKQWFWQPPKTLKAVDGVT
                     LRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGKVAWLGKDLLGMKADEWREVRSD
                     IQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQDVRDRVKAMMLKVGLLPNLINR
                     YPHEFSGGQCQRIGIARALILEPKLIICNEPVSALDVSIQAQVVNLLQQLQREMGLSL
                     IFIAHDLAVVKHISDRVLVMYLGHAVELGTYDEVYHNPLHPYTKALMSAVPIPDPDLE
                     RNKKIQLLEGELPSPINPPSGCVFRTRCPLAGPECAQTRPVLEGSFRHAVSCLKVDPL
                     "
     gene            24283..25119
                     /locus_tag="MOX77_001757"
     CDS             24283..25119
                     /locus_tag="MOX77_001757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ion transporter"
                     /protein_id="HCA3357306.1"
                     /translation="MSLSLSSVRRRLYHNLFDLTTRSSRRFEGLCALFALLSVLVIFV
                     ESGVGTEYHLTFDEWHIFVWLELCVTLIFTGEYLLRLFSWPEPAKYVFSFWGFIDLVT
                     ILPLYVMWLWPEISLNYMFAWRAMRAIRVLRILKLLRFMPSLRVFWSAIISARHQLIL
                     FYSFIAIVMIIFGALMYLIEGPKYGFTTLNASVYWAIVTVTTVGYGDITPHTPLGRIV
                     ASVLILIGYSVIAIPTGLITTHMSSAFQKRHWQQKCPQCQQSQHEHSAQYCNRCGSKL
                     PD"
     gene            complement(25167..25496)
                     /locus_tag="MOX77_001758"
     CDS             complement(25167..25496)
                     /locus_tag="MOX77_001758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_448158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciU family protein"
                     /protein_id="HCA3357307.1"
                     /translation="MEMDLNNRLTEDETLEQAYDIFLELAADNLDPADIILFNLQFEE
                     RGGAELFDPAEDWQEHVDFDLNPDFFAEVVIGLADTEDGEINDIFARVLLCREKDHKL
                     CHILWRE"
     gene            complement(25530..26990)
                     /gene="cls"
                     /locus_tag="MOX77_001759"
     CDS             complement(25530..26990)
                     /gene="cls"
                     /locus_tag="MOX77_001759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin synthase"
                     /protein_id="HCA3357308.1"
                     /translation="MTTFYTVVSWLVILGYWVLIAGVTLRILMKRRAVPSAMAWLLII
                     YILPLVGIIAYLSVGELHLGKRRAERARAMWPSTAKWLNDLKACKHIFAQENSSVASS
                     LFKLCERRQGIAGVKGNQLQLLTDSDDVMQALIRDIQLARHNIEMVFYIWQPGGMADQ
                     VAESLMAAARRGIHCRLMLDSAGSVAFFRSPWAAMMRNAGIEVVEALKVNLMRVFLRR
                     MDLRQHRKMVMIDNYIAYTGSMNMVDPRFFKQDAGVGQWVDLMARMEGPVATAMGIVY
                     SCDWEIETGKRILPPPPDVNIMPFEQASGHTIHTIASGPGFPEDLIHQALLTATYAAR
                     EYLIMTTPYFVPSDDLLHAICTAAQRGVDVSIILPRKNDSLLVGWASRAFFSELLAAG
                     VKIYQFEGGLLHTKSVLVDGELSLVGTVNLDMRSLWLNFEITLVIDDTGFGADLAAVQ
                     DDYISRSRLLDARLWVKRPLWQRITERLFYFFSPLL"
     gene            27133..27306
                     /locus_tag="MOX77_001760"
     CDS             27133..27306
                     /locus_tag="MOX77_001760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciY family protein"
                     /protein_id="HCA3357309.1"
                     /translation="MKRSRTEVGRWRMLRQASRRKARWLEGQSRRNMRIHTIRKCIFN
                     RQRNSLLFAIHGV"
     gene            complement(27350..27646)
                     /locus_tag="MOX77_001761"
     CDS             complement(27350..27646)
                     /locus_tag="MOX77_001761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HCA3357310.1"
                     /translation="MLYVIYAQDNANSLEKRLSVRPAHLARLQLLHDEGRLLTAGPMP
                     AVDSNDPGVAGFTGSTVIAEFESLEAAQSWADADPYVAAGVYAQVSVKPYKKIF"
     gene            27870..>28017
                     /locus_tag="MOX77_001762"
     CDS             27870..>28017
                     /locus_tag="MOX77_001762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460696.1"
                     /note="membrane spanning protein in TonB-ExbB-ExbD
                     complex; transduces proton motive force of the cytoplasmic
                     membrane to outer membrane transporters; involved in the
                     transport of ron-siderophore complexes, vitamin B12 and
                     colicins; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB system transport protein TonB"
                     /protein_id="HCA3357311.1"
                     /translation="MTLDLPRRFPWSTLLSVGIHGAVVAGLLYTSVHQVIELPAPAQP
                     ITVTM"
BASE COUNT         6787 a         6727 c         7460 g         7043 t
ORIGIN      
        1 ggcagccgct ggcgtttgcc cttgactggc agcgtcccgc gcgtcacatg aacagcacct
       61 cttacttcta taaccactcc agccagtggc gctacgagac ggtgaccgcc gaggagttac
      121 tgtcgccgat ggcggacaaa tcccgctata gcggccatct gattgacttc aatgtgcgcg
      181 ccgaacgtat gggctggttg ccgtcggcac cgcagttagg caccaacccg ctgtatattg
      241 cgcgtgaagc ggaaaaagcc ggtatgacgc cggtagatta taccgtcaaa tccctgaaag
      301 acggttcgat tcgctttgcc gccgagcagc cggaaaacgg taaaaaccat ccacgtaacc
      361 tctttatctg gcgttccaac ctgcttgggt cttccggtaa aggtcacgag tatatgctga
      421 aatatctgct gggtactgag catggtattc aggggctgga tctcggcaag cagggcggtg
      481 tgaagccgga agaagtggaa tggcgtgaca atggcctgga cggcaaactg gatctggtgg
      541 tgacgctgga cttccgcctg tcgagcacct gcctgtactc cgatatcgta ctgccgaccg
      601 ccacctggta tgaaaaagac gatatgaata cctcggatat gcatccgttt attcatccgc
      661 tgtctgccgc cgtagatccg gcctgggaat cgaaaagcga ctgggaaatc tacaaaggca
      721 ttgcgaagaa attctccgaa gtctgtgtag gccacctggg taaagagact gacgtcgtga
      781 cgctgccgat ccagcacgac tctgccgctg aactggcaca gccgctggac gtgaaagact
      841 ggaaaaaagg tgaatgcgat ctgatcccag ggaaaaccgc gccgcacatc atgaccgttg
      901 agcgcgatta tccggccacc tatgagcgct ttacctctat tggcccgctg atggagaaaa
      961 tcggcaacgg cgggaaaggg attgcctgga acacgcagag cgaaatggac ttgctgcgta
     1021 agctcaatta caccaaagcg gacggtccgg cgaaaggcca gccgatgctc aacacggcga
     1081 ttgacgcggc agagatgatc ctgacgttag cgccggaaac caacggtcag gtggcagtga
     1141 aagcctgggc ggcgctgagc gagtttaccg gtcgcgacca tacgcatctg gcaactaata
     1201 aagaagaaga gaaaatccgc ttccgcgata ttcaggccca gccgcgcaaa attatctcca
     1261 gcccgacctg gtctggtctg gaagatgagc atgtttctta taacgccggt tataccaacg
     1321 ttcacgagct gatcccgtgg cgtacgctgt ctggtcgcca acagttgtat caggatcacc
     1381 agtggatgcg cgacttcggc gaaagtctgc tggtgtatcg cccaccgatc gacacccgct
     1441 cggtgaaagc ggtgatgggg cgtaaatcca acggtaatcc ggagaaggcg ctcaacttcc
     1501 tgacgccgca ccagaaatgg ggtatccact cgacctacag cgataacctg ttgatgctga
     1561 ccttgtcgcg tggcggcccg attgtatgga tgagtgaaac cgacgccaaa gagctgggca
     1621 ttgaagataa cgattggatc gaagtcttca acagcaacgg cgcattgacc gcacgcgcag
     1681 tggtcagcca gcgtgtaccg gcgggcatga ccatgatgta ccacgcgcag gaacgtatcg
     1741 taaacctgcc ggggtcggaa attacccagc agcgcggcgg tattcataac tcggtgacgc
     1801 gtattacgcc gaaaccgacc catatgatcg gcggctatgc gcagttagcc tacggcttta
     1861 actactacgg taccgtcggc tccaaccgcg atgagtttgt ggtggtacgt aagatgaaga
     1921 acattaactg gttggatggc gaaggcaatg accaggtaca ggagagcgta aaatgaaaat
     1981 tcgttcacaa gtcggcatgg tgctgaatct cgataagtgc atcggctgtc atacctgttc
     2041 agtcacctgt aaaaacgtct ggaccagtcg cgaaggtatg gaatacgcct ggttcaacaa
     2101 cgtagaaagt aagcccggcg ttggttttcc taatgactgg gaaaatcagg aaaaatggaa
     2161 aggcggctgg atccgcaaaa tcaacggcaa actacagccg cgcatgggca accgggcgct
     2221 gctgctgggt aaaatcttcg ctaacccgca tctgccgggc atcgacgact actacgagcc
     2281 gtttgattac gactaccaga acctgcatac tgcgccggaa agcaaacatc agccgatcgc
     2341 gcgtccgcgc tcgctgatta ccggccagcg gatggacaaa attaccagcg ggccaaactg
     2401 ggaagagatt ctgggcggcg agttcgaaaa acgcgccaaa gatcagaatt tcgaaaacat
     2461 gcagaaggcg atgtacggcc agttcgaaaa caccttcatg atgtacctgc cgcgcctgtg
     2521 cgagcactgc ctcaatccgg cgtgcgtggc aacctgccca agcggtgcca tctacaagcg
     2581 tgaagaagac ggcatcgtgc tgatcgacca ggacaagtgc cgcggctggc gtatgtgcat
     2641 caccggctgc ccgtacaaga agatttactt caactggaag agcgggaagt ccgagaagtg
     2701 catcttctgc tacccgcgta tcgaagcggg tcagccgacc gtttgctccg aaacctgtgt
     2761 tggccgtatc cgttatcttg gcgtactgct gtatgacgcc gatgccattg aaagcgctgc
     2821 cagtacggaa aacgaaaaag atctgtacca gcgtcaactg gacgtgttcc tcgatccgaa
     2881 cgatccggct gtcattgagc aggcgctgaa ggacggcgtg ccgcagagcg tgatcgatgc
     2941 ggcgcagcaa tcgccagtgt acaaaatggc gatggactgg aagctggcgc tgccgctgca
     3001 tccggaatac cgcacgctgc cgatggtctg gtacgtgccg cctttgtcac cgattcagtc
     3061 tgccgccgac gcgggtgaac tgggcagcaa cggtattctg ccggatgtag acagtctgcg
     3121 tatcccggtg cagtacctgg cgaatctgtt gaccgctggc gacactcagc cggtactgtt
     3181 ggcgctgaaa cggatgctgg cgatgcgtca ctacaaacgt gcggaaaccg tagacggtaa
     3241 agtggatacc cgcgcgctgg aagaggtggg tttaagcgaa gcccaggcgc aggaaatgta
     3301 tcgttacctg gcgattgcta attacgaaga tcgctttgtg gtgccgagca gccatcgtga
     3361 actggcgcgt gacgcattcc cggagaaaag cggttgtggc tttaccttcg gcgatggttg
     3421 ccacgggtct gataccaaat tcaatctgtt caacagccgc cgcatcgacg ctgttgatgt
     3481 gaccagcaaa acggagccgc acgcatgatt gaactcgtca ttgtttcgcg tctgctcgag
     3541 tacccggatg ctgccctgtg gcagcatcag caggagttgt tcgatgcgct cgcgtcatct
     3601 gagaacctgg ataaagagga tgcccagact ctgggcgttt tcctgcgcga tttaaccgcg
     3661 caggacatgc tggatgtaca ggccgcttat agtgaactgt ttgaccgtgg tcgcgccaca
     3721 tcgctgcttc tgtttgaaca tgtacacggg gaatcccgcg atcgcggtca ggcgatggtt
     3781 gacctgatgg cacagtatga acagcacggt ttgcagctcg acagccgcga actgcccgat
     3841 catctgccgc tgtatctgga ataccttgcg cagttgccga aaagcgaagc gttagggggg
     3901 gtacaggata tcgcgccgat tctggcgttg ctcagcgcac gtttgcaaca gcgtgacagc
     3961 cgttatgcgg tgctgttcga tctgctgtta aaactggcga ataccgttat cgacagcggc
     4021 aaagtggctg aaaaaattgc gaatgaagca cgtgatgata ccccgcaggc gttggatgcg
     4081 gtctgggaag aagagcaggt gaaattcttc gccgatcaag ggtgtggcga gtcggaaatc
     4141 tccgctcacc agcgtcgttt tgccggggcc gtggcgccgc aatatctgaa tatcaccacc
     4201 ggaggacagc actaatgcac ttcctgaata tgttcttctt tgatatctac ccgtacattg
     4261 ccggatcggt atttctgatc ggtagctggt tacgttacga ctacggccag tacacctggc
     4321 gggcggcttc cagtcagatg ctggatcgca aaggaatgaa cctggcgtca aacctgttcc
     4381 acattgggat tctgggtatt ttcgccggtc atttcctggg catgttaacg ccgcactgga
     4441 tgtatgaagc ttttctgccg gtcgacgtga agcagaagat ggcgatgatt gccggcggcg
     4501 cctgcggaat gctgacgctg gttggcggta ttttactgct caagcgtcgt ctgttcagcc
     4561 cacgtgtccg cgccaccact accggtgcag atattttgat tctctcattg ctggtgattc
     4621 agtgcgcgct gggtctgctg accattccgt tctccgccca gcatatggac gggagtgaaa
     4681 tgatgaagct ggtcgggtgg gcgcagtcag ttgtgacctt ccacggtggc gcatccgcac
     4741 atctggacgg tgtagccttt atcttccgta tgcacctggt actggggatg acgctgttcc
     4801 tgttattccc attctcgcgc ctggtgcata tctggagcgt gccggtcgag tacctgaccc
     4861 gcaaatacca gattgtacgt gcgcgtcact gattttctct cgatgcccta aactccgctt
     4921 cggcggagtt tttttatggc tgtttgccgg agtgcagcat aaatgcctta tcgaccgccg
     4981 ccttgtttcg tttacagcgg gtctgccatg tctggcatct gaatccggac tctttgtttc
     5041 tgggtttatt cagcatctgt gcgagttttt tgtaagcaga aaaaggatga tgcagcatat
     5101 aatcacgcca taaacgacaa taaggatagt tgtatgcgtt tttcatcaat tttcaaaata
     5161 ataatattaa atatatttat ttcaaaaatg gctcacgctg ctgtctgcga ggagcgctat
     5221 ccccccgact cagaagaatg ccagtacgtt caggaattag agcaaaaagc ggaacaagga
     5281 gatgaaggcg cgcagttctc gcttggaagc tggtatgcgg aggggcgata cgttaagcct
     5341 gattataaac tagccataaa atggctggag aaagcgggta aacaaggttc tgatttttcc
     5401 tatttcatcc ttggctatca ttacaactat ggtgaaaatt ttccacttag tcggcaaaaa
     5461 gcgctggagt ggtatcgcaa ggcggcagaa ctaggggata gtagtacgca agaaatcctc
     5521 ggtgacgcct atatgtatgg cgatgggttt ccccaaaata cccagctagc gctggagtgg
     5581 tatcgaaaag ccgcctctcc aaccaatgat gcgggcgttg tccgcggcca gggttcagct
     5641 tcgtcagcac aatttaagct tggagtaatg tacgcccacg gtcagggcgt tcctcaggat
     5701 tatcagcaaa cggcgatctt gatgcgtaaa gcggcggaaa atatgtacta ccccgcgcaa
     5761 ctttatctcg gtgttgccta tttttatggt gaaggcgtgc ctcaggatta tcgtcaggca
     5821 gtttactggc ttaatgaagg tataccaggc agctatacgc caggccacat tccgctgaat
     5881 gcgctctatg ataaagcgca tcccgctgac caggttcact ctcagacgtg gtatcgaaaa
     5941 acagcgcaac gcgtgatggc aaaggtacag ttcaattttg gcgtatggta ttacaacggt
     6001 tatcacttat tgaaagatca caatctggcg ctggagtggt atcgcagagc cgcagcgcag
     6061 ggattggccg aggcgcagga tgcgatcggc gtgatgttta tgcagggcga ggccgtttct
     6121 caggactacc aacaggcgct ggcgtggtat cgcaaagccg cacgccaggg actgcctgct
     6181 gcgcaaacgc atctgggcat catgtctgct tttggtcgcg gcgtcgcgca aagcgacaga
     6241 caggctatcg catggtatcg aaaagcagca aaacaggatt ttgcgaaagc gcaatatcag
     6301 cttggcgtag catatagcat gggaagaggc gtgcctgaaa atagccggaa tgcgctgaag
     6361 tggtacctta aagcggcaga gcaggggttt actccggcac aattagcgct tggggaaatt
     6421 tatgctcatg ggcgccaggg ggtgcctaaa gataataagc aggcctatat ttggtattac
     6481 atggcaagta tatatacgga aaaatctaag gatgattgtt cagcgctcat tgccgaaaga
     6541 aaccgactca agggaacgct taccccagat caacttagcg agacatatgc cgcctttgat
     6601 ctcatcaggc gaaaaatcaa ccagtcaaag gaggcgaaaa agattgccag gaagaagtat
     6661 tgataagata gccaataagc tatggcgcca tggtgtgaag tctgcctgtg gggtaaggat
     6721 acggggcagt gctgattgat ttgaaattgg tgccttatga agtaatggtg gtgggggaag
     6781 gatgactcag cgctgcgcgt ttcgcccttc gggtcgttgc ctgcggcaac gttctctcgc
     6841 tttcgctcga atcgaacctt agtcgaagct tctcatcctt ccccacatgg gtagaattat
     6901 gacaaaccga tgtcgaatga aggttagatg ctttctgaag atcatgatgg tggtggggga
     6961 aggatgactc agcgctgcgc gcttcgccct tcgggtcgtt gcctacggca acgctttctc
     7021 gctgcgctcg aatcgaacct tcgaagtcga tgacggcaga tttacagtct gctccctttg
     7081 gccgctcggg aaccccacca cgggataaat tcattatgct gcttgcattc tatagcggga
     7141 aggattattc ggagctaaag ctcctcaccc ttcgggccgt tgcctgcggc aacgttctct
     7201 cactattgct cgagtcgaac cttgaagtcg atgacggcag atttgcagtc agctccctta
     7261 tgatcgctcg ggaaccccac cacggggtaa tgcttaatac tggcccgctt cctttcggga
     7321 agcggggcgc atcatatcaa atgacacgtc gctgtaaagc attcctttgc ctgaaatgaa
     7381 ctgtttgcgt acttttcatc cgtaacggat taaagctaat caattcatat tactgacgat
     7441 taaagaataa tcgtccgatt gccgtaaaca aagacccgct gcgccagaac ctgatacagc
     7501 gcgcggctta atacgttttt ctcaacgtcg cgcccggcac gcatcatatc ttctgcggtg
     7561 taggtgtgat cgacgtgaat cacgtcctgc ataatgattg ggccttcatc tagattatca
     7621 ttcacatagt gcgcggtagc gccgatgatt ttcacgccgc gctcataggc ctgatgataa
     7681 ggacgcgcgc cgataaacgc cggcaggaat gagtggtgga tattgataat tttgttcggg
     7741 aagcgcgcca caaaacctgg cgtcaaaaca cgcatatact tggccagcac tacatagtcc
     7801 ggttgatggg tatcaatggc gtccgccatc ttcgtgtcat gctcttcacg cgttaatccc
     7861 tcatggctga ccagttcgaa agggatctca aaacgttcaa ccagcgagcg taacgtttca
     7921 tggttgccaa tgaccgcggc gatttcaaca tccagcccgc catagttggc tttcatcagc
     7981 aggtcgccca gacaatgcgc ctctttggta accagaatca ctacccgacg gcgtccggcg
     8041 ggattgagtt cacgaacaga gccttccggt aaggcgctgt ccagatcggc cagaagagtg
     8101 gaatcattga agatgccttc cagctcggtc cgcataaaaa agcgtccggt gcgatggtcc
     8161 acaaattcat tgttttgcac aatattaagc tcgtgcttat agcaaatgtt ggtaatccgc
     8221 gcgataaggc ctttttgatc gggacaaata gtacgcagaa ctttacgttg tagtgattgc
     8281 attgccggaa aaatcctgtt gagagtgttt gctgtatcaa tactgtcagg cgtcactggc
     8341 cgcagcactt tttaaatttt ttgcctgaac cgcacgggca gggatcattt cgacccaact
     8401 gcgggcgggt accgtcaata taataccact gaccgttttc tttgataaaa cgagaacgtt
     8461 cgataatcgc cccgtttttc ccttgttcgg aaaaacgcgc gataaaacta acataccctg
     8521 tattttctgc ttctgactag gtatgttcaa aaatagtcag gccgagccac ctggtattgg
     8581 caaatccggc gatgatatca tcacgaaacg cggccgcatt gcaagttgga tgccagctct
     8641 taattaagta atctgcgtct ttcatcacaa aagcgcagta acgagagcgc atgagatgtg
     8701 acggatcggg tgctactcgt tctccggaca caatacgacc acaacatagg ctatactcgt
     8761 cagcgctacc acagggacaa ggctgagaca caataatctc cctgaatata aaacggcgtt
     8821 gaacgccagg gtggcattat gttaactgag cagtggcgat gttgctacgt cttgaagcca
     8881 ggggaagtcg ttaagtacga tgagaaaaat gaaaataggg ctggcgctgg gatctggcgc
     8941 agcgagagga tggtctcata ttggggtcat caaagccctc aagcaaacag gcattgatat
     9001 tgatatcgtt gcaggatgct caataggttc actggtcggc gccgcgtatg cctgtaataa
     9061 attatcggcg cttgaacagt gggtatgttc attccgctac tgggatgttt tacgcctgat
     9121 ggatgtatcc tggggcagag gagggttgct tcgcggcaaa cgcgtattta atcactatcg
     9181 ggatattatg cccgtcacgg attttgacca ctgttcaaga cgttttggcg cggtcgcgac
     9241 gaatcttagc acgggacgag agctatggtt tactgaaggc gatctacacc ttgccgtacg
     9301 cgcgtcgtgc agtatgccag ggctgatgtc tccggttgaa cataacggtt actggctggt
     9361 agatggcgca gtcgttaatc cggtacctgt ttcgttaacc agggcgctgg gggctgatat
     9421 cgttattgcg gtagacctgc aacatgatgc ccacctcatg cagcaagatt tgctctctgt
     9481 aaatgtcggg aatatcaatg aagagagcga tgatgcgctg ccctggcata agcgtttaaa
     9541 agaacgtttc agtagcctga cttcacgccg tggcgtgagt tcgtctgggg caatggaaat
     9601 catgacaacc tccatccagg tgttggaaaa tcgtcttaaa cgtaaccgta tggctggcga
     9661 tccgcctgat attctcattc aaccattctg tccgcaaatc tctacgctgg attttcatcg
     9721 cgcccatgcc gctattgcgg cgggtcagtt agccgtagag aaaaagatgg acgaacttat
     9781 acccttggtg cgtaccgacg tttaatgtac cttttacgat cacttaagca aattctgaca
     9841 ggcgcaagcg gcaataccat gccactattg attaaagcca gtcaggggag agaacatgac
     9901 gcagccattg gtcggaaaac agattcttat tgttgaagac gagcctgtat ttcgctcgct
     9961 tctggattcg tggttttcct ctttgggagc gacaacggca ttggcaggcg acggggtgga
    10021 tgccctggag ttgatggggc gttttacccc tgatctcatg atatgtgata tcgctatgcc
    10081 gagaatgaac ggtctcaaac tggtagaaaa cttacgtaat cgcggagacc agacgcctat
    10141 tctggttatt tccgcaacag aaaatatggc ggatatcgcc aaagcgttac gccttggggt
    10201 tgaagatgtc ttgctgaagc cggtaaaaga tctcaaccgc ttgcgggaaa ccgtattcgc
    10261 ttgcttatac cctaatatgt ttaactcgcg ggttgaagaa gaagaacgcc tgtttcgtga
    10321 ctgggatgca atggtgagta atccgaccgc cgcagcgcaa ttgttgcagg aattgcagcc
    10381 cccggtacag caggtgattt ctcattgccg cattaattac cggcagctcg tctccgccga
    10441 tcagcctgga ctggtgctgg atattgcgcc gctatctgat aacgaactgg cattttattg
    10501 cctggatgtc acccgggcgg gcgataacgg cgtgttagcc gcattgttgc tgcgggcgct
    10561 atttaacggc ttattgcagg atcagctcgg ccaacaaaag caccgtttac cggagttagg
    10621 cgcgctatta aaacaggtaa atcatctgct cagacaagcc aatttacctg ggcaattccc
    10681 gctatttgtc ggctactatc acagtgagct caaaaatttg attctcgtct ccgccggatt
    10741 gaacgccacc ttaaatacgg gcgctcatca ggttcaaatt agcagcggcg tgccgctagg
    10801 aacattgggt aacgcctacc ttaaccaatt aagccagcgt tgcgactcgt ggcagtgtca
    10861 aatatggggc gcaggagggc gtctgcgatt gatgttgtct gcggaatgac caaacggaag
    10921 agtgagcgga aattgcttta ccggcctttc ccgacgagtg ttactatctg cggcagattt
    10981 ataagtattt gtcttaatta taccaatata agtccttttt ggacctgagg cttgttctgg
    11041 tactgatata ctggaacacg atacagatta atgaacacgt tcaatacatg aacagtccag
    11101 gagaatttta aatggctgcc cttaattcga aagtcaaaaa agccgttatc ccggtcgcgg
    11161 gattgggaac caggatgctg ccagcgacca aagctatccc gaaagagatg ctgccgctgg
    11221 ttgataagcc attaattcag tacgtcgtga acgaatgtat cgctgctggc attactgaaa
    11281 tcgtgcttgt tacgcactcg tctaaaaact ctattgaaaa ccactttgat accagttttg
    11341 agctggaagc gatgctggaa aaacgcgtta agcgtcagct tctggaggag gttcagtcta
    11401 tttgccctcc gcatgtcact attatgcagg tacgtcaagg gctggcaaaa ggcctgggcc
    11461 atgccgtatt gtgcgcgcat cccgttgtcg gaaacgaacc tgtcgctgtt attctgccag
    11521 acgttattct tgacgaatat gagtccgacc tgtctcagga taacctggct gaaatgatcc
    11581 gccgtttcga cgaaaccggc aatagccaga ttatggttga gccagtagaa gatgtgactg
    11641 catacggcgt ggtcgattgc aaaggcgttg agctggcgcc gggcgaaagt gtgccgatgg
    11701 ttggcgtggt tgaaaaacca aaagcggatg tcgcgccgtc taaccttgcg attgtcgggc
    11761 gttatgtgtt gagcgcggat atctgggcgt tgctggcgaa aacccctccg ggcgccgggg
    11821 atgaaattca gttgaccgat gctatcgata tgctgatcga aaaagaaacg gttgaagcct
    11881 accacatgaa gggtaaaagc catgactgtg gtaataagtt aggatatatg caggcattcg
    11941 ttgaatatgg catccgtcat aattcgctgg gtgctgaatt taaagcctgg cttgaagaag
    12001 aaatgggtat taagaagtaa cgatacgtta taaatttttt aacagaagcg ctggtaaatc
    12061 cggcgctttt tttatgcctg gggtcgtcag cggagaactc aggcaaaaaa aatcccgcca
    12121 gcggcgggat tttaagcatc caggaagtaa attattcctt gatcaggaaa tcttccagtt
    12181 gcttaccttg ttcttccatt gcttttttga ttacagccgg tgtacgaccc tggccagtcc
    12241 aggttttagt ttcaccgttt tcgtcaacat agctatattt agccggacga gctgcgcgtt
    12301 tagctttggt accggattta gcggcagcca tgctattcag cagttcattc gggtcaatgc
    12361 cgtcggcaat taacatttca cgatactgtt gcagtttacg agtgcgttct tccacttcag
    12421 cagcagcagc gctttcttct tcacgacgct cattaacgac aacttctaat ttttccagca
    12481 tttcttcaag cgtttccaga gtacattctc ttgcctgcgc acgaagagta cggatgttgt
    12541 tcagaatttt aagtgcttcg ctcattgtag taatctcaaa cttatattgg ggtggtttgt
    12601 tgagctaata atagagcgat aaattcagtt gtgcaatagc caggaatgta aggaattcaa
    12661 aattacgctt tattaagcac acgttttaat tatctcaact taaattttcc ttgaggcgcc
    12721 gcacaaaaaa gagcttattg ccagggggga tactcaccgt ctgtcactaa aaatttagga
    12781 ttcaggtcac attttatcat gatgaaatac gatctcattg cagagatatc aatctcttgt
    12841 attagctttc cttacaagaa aaccctatta ctttgcattg ggtatgagta acggtaacaa
    12901 taagtacaag gttttcatat tggcgggtga tgataagcat tgttgatgaa ttttaacggc
    12961 ataatttgtg aaggaatgtg tatataccct tcatacttca agttgcttat gtgttggcta
    13021 cgctcgcgca ccccagccac atagttatct atgctcctgg ggactcactc ccttgccgcc
    13081 tttaagcaac tcgaattatt ttgggtatag tgagcgatgt ttgtacaatt cttaatactc
    13141 accggagcgc gagccgcgcc gtcgcatcgg taaattatgg tacaatcccg ccaatcttta
    13201 tttcactcag gtgaggtcct gcgaccaatg gcacagctat atttctacta ttcggcaatg
    13261 aatgcgggta agtcgactgc actgctgcaa tcttcataca attatcagga acgcgggatg
    13321 cgtaccgtcg tatatacggc ggaaatcgac gatcgtttcg gcgcaggcaa agtcagctct
    13381 cgtatcggtt tgtcgtcgcc ggcaaaattg tttaaccaaa atacatcctt gtttgaagag
    13441 attcgtgccg agagcgcgcg gcagacaata cattgcgtgt tagtcgacga aagccagttt
    13501 ttgactcgcc agcaggttta tcaattatcc gaggttgtcg acaaattaga tattccagta
    13561 ctctgctatg ggctacgaac agactttcgt ggggagctct ttgtcggcag ccaatacttg
    13621 ctggcatggt cagataagct ggtggaatta aaaactatct gtttctgcgg tcgtaaagcc
    13681 agtatggttt tgcgccttga tcaggacggc aggccttata acgaaggcga acaggtggtt
    13741 attggcggga atgaacgcta cgtttcagtt tgccgtaagc attataagga cgcgctggag
    13801 gagggctcac tgacggcgat tcaggagcgc catcggcaca tatgatacct gaggtaaaga
    13861 tcggcttata aaacgccctg tagcgctttg gaggtcatta ttcaggcctc ctgacgaagg
    13921 gcgtgccgtg agcgcgtagg ccagatggta agcatagcgc cttcaggcat cagataaaca
    13981 ggtaaaacaa aaaaacggcc tcaattgagg ccgttattgt catgctaaaa cagataacga
    14041 attaagcgga ttttttcgct tttttctctg ctttcggtgc ggcaacgacg tctttcttcg
    14101 ctgcaacttc accttcggtg aaatcacgac cgtagtaggt atccagcaga atctgtttca
    14161 gttcggagat cagcggataa cgcgggttag cgccggtgca ctggtcatcg aaggcatctt
    14221 cagacagttt gtcaacgtgt gccaggaagt cagcttcctg cacgcctgct tcacgtatag
    14281 acttaggaat gcccagctca gctttaatgc tttccagcca tgccagcagt ttttcaatct
    14341 tagcggcggt acggtcgccc ggcgcgctca ggcccaggtg gtcagcaatt tcagcgtaac
    14401 gacggcgtgc ctgcggacga tcgtactggc tgaaagcggt ctgcttggtc gggttgtcat
    14461 tcgcgttgta gcggataacg ttacaaatca gcagggcgtt cgccagaccg tgcggaatgt
    14521 ggaactgaga gcccagtttg tgcgccatgg agtgacatac accgaggaag gcgttggcaa
    14581 acgcgatacc ggcgatagtc gctgcactgt gaacacgttc acgcgcaacc gggtttttag
    14641 acccttcgtg gtaagacgcc ggcaggtttt ctttcagcag tttcagagcc tgcagagcct
    14701 gaccgtcaga gaactcagaa gccagtacgg aaacgtaagc ttccagggcg tgagttaccg
    14761 catccagacc accgaacgca cacagggact tcggcatatc catcaccagg ttggcatcga
    14821 caatcgccat atccggggtc agggcatagt cagccagcgg atatttctga ccggttgcat
    14881 tgtcggtcac aaccgcaaac ggtgtgactt cagaaccggt accggaagtg gtggtgacgg
    14941 cgatcatttt cgctttcacg cccattttcg ggaacttgta gatacgttta cggatgtcca
    15001 taaagcgcag cgccagttct tcgaagtgag tttccggatg ttcgtacatg acccacatga
    15061 ttttcgcggc gtccatcggg gaaccgccgc ccagcgcgat gatcacgtcc ggtttgaagg
    15121 agttagccag ctcagcgcct ttgcgaacaa cggaaagcgt cgggtctgct tcaacttcga
    15181 agaagacttc ggtttcaacg ccagccgctt tcagcacaga ggtgatctgg tctgcatagc
    15241 cgttgttgaa caggaagcgg tcagtcacga tgagcgcacg tttgtggcca tcagtaatca
    15301 cttcatccag cgcgatgggc agagagccac ggcggaagta gatagatttc ggaagtttgt
    15361 gccacaacat gttttcagct cgcttagcaa cggttttctt gttgatcagg tgtttcggac
    15421 caacgttttc agagatggag ttaccacccc aggaaccaca acccaacgtc agggaaggtg
    15481 cgagtttgaa gttgtacagg tcaccgatac caccctgaga ggccggggtg ttgatcagga
    15541 tacgcgcggt tttcatcatc tgaccgaagt aagcaacgcg ttctggctgg ttatcctggt
    15601 cagtgtacag gcaggaggtg tgaccgatac cgcccatagc gaccagtttt tctgcttttt
    15661 ctaccgcttc ttcgaaatct ttcgcacggt acatcgctag agtcggagac agtttttcgt
    15721 gtgcgaacgg ttcgctttcg tcaacgaccg taacttcacc gatcagaatc ttggtggttt
    15781 ctggtacgga gaagcctgcc agttcagcga ttttgtaggc tggctgaccg acgatagcgg
    15841 cgttcagagc gccatttttc agaataacgt tttgaaccgc tttcagctcc tggccctgca
    15901 gcatgtagcc gccgtggctg gcgaaacgtt cgcgaacggc atcatagacg gaatcaacaa
    15961 cgacaacaga ctgttcagaa gcacagatta cgccgttatc gaaggtttta gacatcagaa
    16021 cagacgccac agcgcgtttg atatcagcgg tttcatcaat gacaaccggg gtgttacctg
    16081 cgcctacgcc gattgccggt ttaccggagc tgtatgcagc tttaaccatg cctggaccgc
    16141 cagtggcgag gatcaggtta atatccgggt ggtgcatcag cgcattagac agttctacgg
    16201 aaggttgatc gatccagcca atcagatctt tcggtgcgcc ggcagcgata gccgcttgca
    16261 gaacgatgtc tgccgctttg ttagttgctt ctttagcgcg cggatgcgga gaaaagatga
    16321 tggcgttacg ggtcttcagg ctaatcagcg atttgaagat cgcagtagag gtcgggttag
    16381 tggttggaac gataccgcaa ataatgccga taggttcagc aatggtgatg gtcccgaagg
    16441 tgtcgtcttc tgacagcacg ccgcaggttt tttcatcttt ataggcattg taaatatatt
    16501 cagaagcgaa gtggttttta atcactttgt cttccacgat acccatacct gattcggcga
    16561 cggccatttt ggccagcgga atgcgggcat cagcggctgc cagagcggcg gcgcggaaga
    16621 ttttgtcgac ctgttcttga gtgaaactgg catattcacg ctgggctttt tttacacgct
    16681 ctacgagtgc gttaagttca gcgacattag taacagccat aatgctctcc tgataatgtt
    16741 aaactttttt agtaaatcat ctgcgcgata cgtgagtata gacagatcga cgatactttg
    16801 tataaatacc tgaaattcag gtggttactt aacgtccgtt tcgctctgat ttactaaaag
    16861 agcttctgcg ttagtatcat ttaactctaa cgcgttacgt ccaggtggcg taagcaagat
    16921 tactcacttc tgagtagcga ttgtgtgatc taaatcaaga ttacgcaaag ctgacacctt
    16981 tcagcaggcc attttagcct tttatgtaaa ttgttaagaa atcgttgtca tgaagagtaa
    17041 gtggattagc ataacgagta catataaata acagcgatga atggatgaaa ttaggtgtag
    17101 ataagaggtg aactatgcga ataaaaggcg tatcttctgc gcgttttgat cattaacgaa
    17161 cattgacttc atccggctaa cgcttcggag ctaaccgtga ttcaaccgct ttttgatttt
    17221 cctgtttact ttaagttctt tatcgggctc tttgcgctgg ttaacccggt ggggattatt
    17281 cccgttttca tcagcatgac cagctaccag acggccacgg cgcgtaataa aactaacctc
    17341 accgcgaatc tgtcggtcgc gattatcttg tggagttcct tattcctcgg cgatggcatc
    17401 ctgcagctgt ttggtatttc tattgattcg ttcagaattg cgggcggtat cctggttgtc
    17461 accattgcaa tgtcgatgat cagcgggaag ctgggggaag ataaacaaaa caagcaagaa
    17521 aagtcagaga cggccatacg cgagagcatt ggcgttgtgc cgttagcgct accgttaatg
    17581 gcggggccag gggcgattag ctccactatc gtctggggga cgcgttatca cagcatcgcg
    17641 catttgcttg gtttttcagt tgccattgcg ctttttgcgc tttgctgctg gggcgtgttc
    17701 cgtatggcgc cgtggctggt tcgtttgctg gggcaaaccg gtatcaacgt tattacccga
    17761 atcatggggt tgttgttaat ggcgctcggc atcgaattta ttgtcacagg aataaaaggc
    17821 attttccccg gcttgctcaa ctaaactccc acctgttgat ttacaggcgg cgccctaagg
    17881 gggccgcctt gtgacattcc cagtgacatt cccacgtaac acttcttact ttgataagca
    17941 ttcagcgttt aaatgataaa aaatactaat ataatctaac gctatttatt tttattaatc
    18001 aatctattat gaacattact gagaccgtga gaagcggtag gtctgttatt ttattcacac
    18061 catactctgg ggcttgatga aggattattg aaatgttatt agttgtttca gctccatcgt
    18121 agatgaatgt gctaaataat gagcatttgt taaatttgtg tgtgttttct ggcgcaggca
    18181 taacctacga tgcgacagag agatattttt ctttcaactt attgattata aagaataaat
    18241 caaagatttt taacattctt taaccgtttt tctgggcagg caattttcca taaaagagaa
    18301 ttggttaaca aaattgtaaa atgaattggc ggttcagaaa cgcatttgat acttttcggc
    18361 caaacatttt gcagaagatt tcacattgtt gataactatt ttcatttaca tggttgtcag
    18421 aaataacgtg cgacgtgggc aggtacgtcg tataccgaat cgacgaaagc gatcgaacga
    18481 atcgtcagaa taaataaagt cggtgatagc aaaagcagtg acagacctgg cagtacacca
    18541 ccagtgctgt acaggagccc tgacgggatt aaacaggctg gtaaaaacca gtaattataa
    18601 tgagtggagt acaaacacaa tgtctaacat cacgaaaaaa agtttaattg cagtgggaat
    18661 actcactgcg ttcatcgccg ccagcgccgc gactgcggca gacgtgcccg ccggtgttca
    18721 gttagccgac aagcaaacgt tggtacgtaa taatggatca gaagtgcagt ctctcgaccc
    18781 gcataaaatt gaaggcgtgc cggaatcgaa cgtcagccgt gatctctttg aaggcttatt
    18841 aattagtgat gtcgaggggc atccttcacc gggcgtcgcg gaaaaatggg aaaataaaga
    18901 ttttaaagtc tggacattcc atctacgtga aaatgcgaaa tggtcagatg gtacgcccgt
    18961 caccgcccat gatttcgttt atagctggca acgcctggcc gatcctaata cggcatcgcc
    19021 gtacgccagc tatctgcaat acggtcatat cgttaatatc gatgacatta tcgccggtaa
    19081 aaaacccgcc accgatctgg gggtaaaagc gcttgatgat cacaccttta aagtgacctt
    19141 aagtgagccg gtgccttatt tctacaaatt gttggtccac ccttcagtgt ctcctgtacc
    19201 gaaatcagcg gtcgaaaaat ttggcgataa atggacgcaa ccagccaata ttgtcactaa
    19261 cggcgcttat aagttaaaaa attgggtggt gaacgaacgt atcgtgctgg agcgtaaccc
    19321 gcaatactgg gataacgaca aaaccgtcat caatcaggta acttatttgc ctatctcttc
    19381 ggaggtgacg gatgttaacc gctaccgcag cggcgagatc gatatgactt ataacaatat
    19441 gccgatcgaa ttattccaga aactgaagaa agagatcccg aatgaagtcc gcgtagaccc
    19501 ttatttgtgt acctattatt acgaaattaa taatcaaaaa gcgccgttta acgatgtccg
    19561 cgtgcgtacc gcgctgaaac tggcgttaga tcgcgacatt attgttaata aggttaaaaa
    19621 tcagggcgat ttacccgctt atagctacac gccgccgtat accgatggcg caaaactggt
    19681 agagcctgag tggttcaaat ggtcccagca aaagcgtaat gaagaagcga agaaattgtt
    19741 ggctgaagcc ggctttacgg cggataagcc cttaacattc gacctgctgt ataacacctc
    19801 cgatctgcat aaaaaactgg ctattgccgt ggcgtctatc tggaagaaaa atctgggcgt
    19861 caatgtgaat ctggagaatc aggaatggaa aaccttcctg gatacccgtc atcagggcac
    19921 ctttgatgtc gccagagccg ggtggtgcgc agattataat gaaccgacct cgttcctgaa
    19981 taccatgttg tccgacagtt caaataacac cgcgcattat aagagcccgg cgtttgataa
    20041 gctgattgcc gacacgctga aagtggcgga cgatacgcag cgcagcgaac tctacgctaa
    20101 agcggagcag cagttagata aagactcggc tattgtgccg gtgtattact acgttaacgc
    20161 gcgcctggtg aaaccctggg tgggcgggta taccggtaaa gacccgctgg ataatattta
    20221 tgtgaaaaac ttatatatta tcaaacatta atggcaagac atgggacaac tgcggttgtc
    20281 ccatggtgtc ttttttcatc gcactataac tttccctggc ggatcttttg tcacgtccgg
    20341 gaagtaaagg cacaggccag aaggtacggg caatgttgaa atttatttta cgccgctgtc
    20401 tggaagcgat tccgacgctg tttattctta ttaccatctc tttctttatg atgcgcctcg
    20461 cgccggggag tccttttacc ggcgagcgcg cattgccgcc ggaagtgctg gccaatattg
    20521 aagcaaaata tcatctgaac gatcccatca tgacgcagta cttcagctac ctgaagcagc
    20581 tggcgcatgg cgattttgga ccatcgttta aatataaaga ttacacggtc aacgatctgg
    20641 ttgccgccag cttccccgtt tcggcgaaac ttggcgccgc cgcttttttg ctggcggtca
    20701 ttattggtgt cagcgctggc gtgattgccg cgctaaagca aaatacgcga tgggattata
    20761 cggtgatggg atttgccatg accggcgtcg ttatccccag ttttgtggta gcgccgctac
    20821 tggtgatggt ctttgcaata accttgcaat ggctgcttgg cggcggctgg aacggcgggg
    20881 cgttaaaatt tatgatcctg ccgatggtcg cgctttcact ggcctatatt gccagcatcg
    20941 ctcgtattac gcgcggctca atgattgaag ttctgcattc gaactttatt cgtaccgcgc
    21001 gggcaaaagg attaccgatg cgcagaatca tcttccgcca tgcgttaaaa cctgcgctgc
    21061 tgccggtttt atcctatatg gggccagcct ttgtcggcat tattaccggc tcaatggtga
    21121 ttgaaacgat ttatggctta ccgggcattg ggcagctttt cgttaatggc gcgctcaacc
    21181 gcgattactc gctggtgtta agtttgacca ttttagtcgg ggcgctgacc atattgttta
    21241 acgccattgt cgatgtgctc tatgccgtta tcgacccgaa aattcgctat tgatactgga
    21301 gctcgcgatg atgttaagta agaaaaacag cgagacgctg gaaaatttca gtgaaaagct
    21361 ggaggtggaa ggtcgcagcc tttggcaaga tgcccgtcgg cgctttatgc ataaccgtgc
    21421 ggcggtggcc agtcttattg tcctgtttct gatagcccta ttcgtgacag tagcgcctat
    21481 gctgtcgcaa tttacctatt tcgataccga ctggggcatg atgtccagcg cgccggatat
    21541 ggcgtccggc cactatttcg gcactgactc ttccgggcgc gatctgttgg tgcgcgttgc
    21601 catcggcggg cgtatctcat tgatggtcgg gattgccgcc gcgctggtgg cggtcattgt
    21661 cggaacgctg tatggctcgc tgtccgggta tctgggcggc aaaattgatt ctgtgatgat
    21721 gcgtttgttg gagatcctca actcgttccc gtttatgttc tttgtgattt tgctggtgac
    21781 gttttttggc agaacattct gttgattttc gtcgccatcg gcatggtctc ctggcttgat
    21841 atggcgcgta tcgtgcgtgg ccaaacccta agtcttaaac gtaaagagtt catcgaagcc
    21901 gcgcaggtgg gtggtgtgtc gaccgccagc attgtgatcc gccatattgt gcctaacgtc
    21961 ctgggcgtag tggtagtgta tgcatcgttg ctggtgccca gcatgattct gtttgagtct
    22021 ttcctcagtt tcctggggct tgggacgcag gaaccgttaa gcagttgggg agcgttgttg
    22081 agcgatggcg caaattcaat ggaagtctta ccgtggctgc tgctgtttcc ggctggcttt
    22141 ctcgtggtga cgttattctg ttttaacttt attggcgatg gcctgcgtga tgccctcgac
    22201 ccaaaagatc gttaaggagt acagccatga gcttatcaga aaccgcaact caggcgccgc
    22261 aaccggcgaa tgtactgctg gaggtaaacg atcttcgtgt tacgttcgct acgcctgatg
    22321 gcgatgtgac ggcggtcaac gatctgaact ttacgcttcg cgctggagaa acgttaggta
    22381 ttgttggcga gtctggatcg gggaaatcgc aaacggcgtt cgcattaatg ggactgctgg
    22441 cgacgaatgg tcgaatcggc ggttccgcga cctttaacgg acgtgaaatt cttaatctac
    22501 ctgagcgcga actgaatacg ctgcgcgcag aacagatttc gatgattttt caggacccga
    22561 tgacctcgct aaatccttat atgcgcgttg gggagcagtt aatggaagtc ctgatgctgc
    22621 ataaaggaat gagcaaagcg gaagcttttg aagagtccgt cagaatgctg gatgccgtaa
    22681 aaataccgga agcgcgcaaa cggatgaaaa tgtacccgca cgaattttcc ggcggaatgc
    22741 gtcaacgtgt gatgattgcg atggcgctgt tgtgcaggcc gaaactgctt attgccgatg
    22801 agcctaccac cgcgcttgat gttaccgtgc aggcgcagat tatgaccttg cttaatgagc
    22861 taaagcgcga atttaatacc gccattatca tgattaccca cgatctgggc gtggtcgcgg
    22921 gtatttgcga taaggtcctg gtaatgtatg ccgggcgtac catggaatac ggtaaggcgc
    22981 gcgatgtctt ttatcagccc gttcatccgt attcgatagg cttgcttaat gcggtgccgc
    23041 gtctggatag cgagggggcg gaaatgctga cgattccggg caatcctccc aatttattgc
    23101 gtttgcctaa aggttgtccg ttccagccgc gttgtcctca tgcgatggag atctgcaata
    23161 atgcgccgcc acttgaagcg ttcagtcctg gtcgcttgcg cgcctgtttt aaaccggtgg
    23221 aggaactgct atgaatgctg tgattgaaca acgtaaagtt ctcctcgaaa tcgccgatct
    23281 aaaagtacat tttgatatca aagaagggaa gcagtggttc tggcaaccgc cgaaaaccct
    23341 gaaagcggtg gacggcgtta cgctacgcct gtatgaaggc gaaacgcttg gcgtggtggg
    23401 ggaatccggc tgcggcaagt cgacgtttgc gcgcgccatt attggtctgg tgaaggcgac
    23461 agacggtaaa gtcgcctggc tgggaaaaga tctgttgggc atgaaagcgg atgagtggcg
    23521 cgaggtgcgc agcgacatcc agatgatttt ccaggacccg ctggcgtcac tcaacccgcg
    23581 aatgacgatt ggcgaaatta tcgctgaacc gctgcgcact tatcatccta agctttcgcg
    23641 ccaggacgtg cgtgaccgcg tgaaagccat gatgctgaaa gtggggctgc tgccgaatct
    23701 catcaaccgt tatccccatg agttttccgg ggggcagtgc cagcgcatcg gtatcgcccg
    23761 ggcgttgatc ctggagccta agctcattat ttgcaatgag ccggtgtcgg cgctggacgt
    23821 ttctattcag gcgcaggtgg tgaatttgct ccagcagtta cagcgagaga tggggctgtc
    23881 gttgattttt attgcgcacg atctggcggt cgtaaagcac atatccgatc gtgtcctggt
    23941 gatgtatctc ggtcatgcgg tagaattggg cacctatgat gaggtgtacc ataatccact
    24001 gcatccttat accaaagcgc tgatgtcggc ggtaccgatt cccgatcccg atctggagcg
    24061 aaataagaag atacaattgc tggagggcga attaccttcg cccattaacc cgccttccgg
    24121 ctgcgtgttc cgtacacgct gtccgctagc cgggccagaa tgcgcgcaaa cgcgaccggt
    24181 gttggaaggg agttttcgcc atgccgtttc ctgccttaaa gtagacccgt tataatcgca
    24241 agggctgaca attcgtcagc ccttctttta ggtgaggtta ccgtgtcact ttctttgtcg
    24301 tcggttcgcc gtcgtcttta tcataatctg ttcgatttga ctacgcgctc aagtcgccgt
    24361 tttgaagggt tatgcgcgct gtttgcgctg cttagcgtac tggtcatttt tgttgaatca
    24421 ggcgtaggaa cggaatatca cctgacattt gatgaatggc atatttttgt ctggctggag
    24481 ctgtgcgtta ccctgatatt taccggtgaa tacttgctca gactgtttag ttggcccgaa
    24541 ccggcaaaat acgtttttag tttctgggga tttattgatc tggtgacgat tttgccgctg
    24601 tacgtcatgt ggctatggcc ggaaattagc ctgaactata tgtttgcctg gcgcgctatg
    24661 cgagcgattc gcgtgctgcg tattcttaaa ctgctacgtt ttatgccatc cctgcgcgta
    24721 ttctggagcg ccattattag cgcgcgtcat cagcttattc tgttctattc atttattgcg
    24781 atcgtgatga ttattttcgg tgccctgatg tatcttattg aaggaccgaa atatggcttc
    24841 acgacgctta atgcctcggt gtattgggcg atagtgacag tcacaaccgt ggggtacggt
    24901 gatattacgc cgcatacgcc gctgggacgt attgtcgcgt cggtgcttat tttgattggt
    24961 tattcggtga ttgcgattcc tacaggactg attaccacgc acatgagcag cgcgtttcaa
    25021 aaacgtcact ggcagcaaaa atgtccgcag tgccagcaaa gccagcatga acatagcgcg
    25081 caatattgta accgatgcgg cagtaagcta ccggattaaa caggcttgcc ggagggcgct
    25141 atcagacgcc atccggcctg aaccgcttat tcgcgccaga gaatatggca cagcttgtgg
    25201 tccttttccc ggcacagcag aacgcgggca aaaatgtcgt taatttcgcc gtcttcggta
    25261 tccgccaggc caatcaccac ctcggcaaaa aagtctggat tcaggtcaaa atcgacgtgc
    25321 tcttgccagt cttcagcggg atcaaacaac tccgcgccgc cgcgctcctc gaattgcaaa
    25381 ttgaacagaa tgatatcagc cggatcaaga ttatccgccg ccagctcaag aaaaatatcg
    25441 taagcctgct caagcgtttc gtcttcagtc aggcgattgt tcagatccat ttccatagtg
    25501 actacctgtt tactcatgtt ggtcacgttt tacagcaatg gactaaagaa gtaaaacaat
    25561 cgctcggtaa tacgctgcca taacggacgt tttacccaca aacgcgcatc taacaggcgg
    25621 gagcgcgaaa tataatcgtc ctgtaccgca gccagatcgg cgccgaaacc cgtatcatca
    25681 atgaccagcg taatctcgaa attaagccac aggctacgca tgtcgagatt cacggtaccg
    25741 accaggctca gttcgccatc gaccagcacg cttttggtat gcaacagccc gccttcgaac
    25801 tgatagattt tcacgcccgc cgccagtaac tcgctgaaaa aggcgcgact ggcccagccg
    25861 acgagcagtg aatcattttt acggggcagg ataatactga catccacgcc gcgctgcgca
    25921 gcggtacaaa tggcgtgcag cagatcgtcg ctggggacga aatatggcgt ggtcataatt
    25981 aaatattcgc gcgcagcata ggtggcggtt aatagtgcct ggtgaatgag atcttccgga
    26041 aaaccaggac cggaagcaat ggtatgaatg gtatgcccgc tggcctgctc aaacggcata
    26101 atattcacgt ccggcggggg aggcagaatg cgtttacccg tctcgatttc ccaatcgcag
    26161 gagtaaacaa tccccattgc tgtcgccacg ggaccctcca tccgcgccat caaatcgacc
    26221 cattgtccaa cgccggcatc ctgtttgaaa aaacgcgggt ccaccatatt catactgccg
    26281 gtataggcga tgtaattgtc aatcatcacc attttacggt gctggcgaag atccatacgg
    26341 cgtaaaaaga cgcgcatcag attcaccttc agcgcctcta cgacttcaat gccagcgtta
    26401 cgcatcatgg ccgcccaggg gctgcggaag aaagcgacgc tacccgcgga atccagcata
    26461 agccggcaat ggatgccgcg gcgggcggcg gccattagcg attcagcgac ctgatccgcc
    26521 atgccgcctg gctgccagat gtaaaacacc atttcgatat tatgccgcgc cagttggata
    26581 tcgcgaataa gcgcctgcat gacatcatcg gagtcggtaa gtaattgcaa ctggttgcct
    26641 ttgacgcccg caatcccctg acgtcgttcg cacagcttaa acaaggacga tgcgacgcta
    26701 ctgttttctt gcgcgaaaat gtgtttgcag gctttgaggt cattcaacca tttggcggta
    26761 gacggccaca tggcgcgggc acgctcggcg cgacgtttgc ctaaatgcaa ttcgcccacg
    26821 gacaaatagg cgatgatccc gaccagcgga aggatataga tgattaacaa ccaggccatt
    26881 gcggagggaa ctgcgcgccg tttcattaga atacgtaatg tgacgccggc aatgagaacc
    26941 cagtatccca aaatgaccag ccaactcacc acggtgtaga aggttgtcat aactttaaaa
    27001 atcctttaga aagcgtgttg ttaagagttt acgcgtcagg attcacatgg caaataaaaa
    27061 cacgggaaaa gcgctggtct gcatccggcg agggggtata atggcgcttc tgttacagtg
    27121 agagtcgtaa acatgaagcg tagtagaacg gaagtggggc gctggcgaat gctacgtcag
    27181 gcgagccgcc gtaaagcgcg ttggcttgaa gggcaatcac gccgtaatat gcgtatccat
    27241 actatcagga aatgcatctt taatcgtcag cgtaattcat tactctttgc gattcacggt
    27301 gtgtgagcca gaaagggcac cgtatgcggt gcccaacagg ccatcctttt caaaagatct
    27361 tcttatacgg tttgaccgaa acctgcgcat agacgcccgc tgcgacgtag ggatccgcat
    27421 cagcccagga ttgcgctgct tctaaagatt caaattcagc aatcaccgtt gacccggtaa
    27481 atccggctac cccaggatcg ttactgtcca ctgcgggcat cggcccggca gttaataatc
    27541 gcccttcatc atgcagaagt tgcaggcgcg ccagatgcgc gggccgtacc gagaggcgtt
    27601 tttcaagcga gttggcatta tcctgagcgt aaataacata cagcacgggt agagctcctt
    27661 aatcggtaaa agttgctgat tacgttattg gaaagggcat ttaactgcaa tgtaaagata
    27721 ccgactttgt taaacatgca cattttgtgt ggtgtttttg tgcaatatca tcttttaaat
    27781 gccgctatcg gcaatgcctt attgaatatg attgctattt gcatttaaaa ttcagctctg
    27841 gtttttcaac tgaaacgatt atgacttcaa tgacccttga tttacctcgt cgctttccct
    27901 ggtcgacact cctttccgta ggcattcatg gtgctgtagt ggcaggtttg ctctatacct
    27961 cggtacatca ggttattgaa ttgcctgcgc cagcgcagcc tatcacggtg acaatgg
//
LOCUS       DAGWFR010000040        27460 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.041, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000040 DAGWFR010000000
VERSION     DAGWFR010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 27460)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27460)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27460
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.041"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(88..1121)
                     /gene="astA"
                     /locus_tag="MOX77_001763"
                     /pseudo
     CDS             complement(88..1121)
                     /gene="astA"
                     /locus_tag="MOX77_001763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460270.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="arginine N-succinyltransferase"
     gene            complement(1112..2338)
                     /locus_tag="MOX77_001764"
     CDS             complement(1112..2338)
                     /locus_tag="MOX77_001764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HCA3357312.1"
                     /translation="MSLSVTRENFDEWMVPVYVPAPFIPVRGEGSRLWDQQGKEYIDF
                     AGGIAVNALGHAHPALREALNEQANRFWHTGNGYTNEPALRLAKKLIDATFAERVFFC
                     NSGAEANEAALKLARKYAHDRVGNHKSGIVAFKNAFHGRTLFTVSAGGQPTYSQDFAP
                     LPPDIRHAAYNDLNSASALIDDNTCAVIVEPVQGEGGVIPATNAFLQGLRELCDRHQA
                     LLIFDEVQTGVGRTGELYAYMHYGVTPDILTTAKALGGGFPIGAMLTTQDYASVMTPG
                     THGTTYGGNPLATAVAGKVLDIINTPEMQNGVRQRHDAFIERLNTINVRFGMFSEIRG
                     LGLLLGCVLQTEFAGKAKLIAQEAAKAGVMVLIAGGDVVRFAPALNVSDEEIATGLDR
                     FALACERLQAGGASCG"
     gene            2784..3590
                     /gene="xthA"
                     /locus_tag="MOX77_001765"
     CDS             2784..3590
                     /gene="xthA"
                     /locus_tag="MOX77_001765"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HCA3357313.1"
                     /translation="MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDEMFPL
                     EEVAKLGYNVFYHGQKGHYGVALLTKATPISVRRGFPDDGEEAQRRIIMAEIPSPLGN
                     ITVINGYFPQGESRDHPLKFPAKAQFYQNLQNYLETELKCDNPVLIMGDMNISPTDLD
                     IGIGEENRKRWLRTGKCSFLPEEREWMSRLLKWGLVDTFRQANPQTMDKFSWFDYRSK
                     GFVDNRGLRIDLLLASAPLAERCAETGIDYDIRSMEKPSDHAPVWATFRV"
     gene            3663..4079
                     /locus_tag="MOX77_001766"
     CDS             3663..4079
                     /locus_tag="MOX77_001766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine (deoxy)nucleoside triphosphate
                     diphosphatase"
                     /protein_id="HCA3357314.1"
                     /translation="MIKKLDVVAAIIERDGKILLAQRPVHADQAGLWEFAGGKVEPGE
                     TQPQALIRELREELGIDATPGVYIASHQRDVSGRRIHLHAWHVPAFNGLIRALEHQAL
                     AWCTPEEALEYPLAPADIPLLQAFMALRDARLTDLC"
     gene            complement(4039..4314)
                     /locus_tag="MOX77_001767"
     CDS             complement(4039..4314)
                     /locus_tag="MOX77_001767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017465441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YnjH family protein"
                     /protein_id="HCA3357315.1"
                     /translation="MRRSLMVAVMAIMPMVGLANQNSRPDIQVNVPPEVFSTRGQSSQ
                     PCIQCCVYQDQNYSEGAVIKVEGVVLQCQRDEKTISTNPLVWRRVKP"
     gene            4553..5896
                     /gene="gdhA"
                     /locus_tag="MOX77_001768"
     CDS             4553..5896
                     /gene="gdhA"
                     /locus_tag="MOX77_001768"
                     /EC_number="1.4.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-specific glutamate dehydrogenase"
                     /protein_id="HCA3357316.1"
                     /translation="MDQTCSLESFLNHVQKRDPHQTEFAQAVREVMTTLWPFLEQNPR
                     YRHMSLLERLVEPERVIQFRVVWLDDKNQVQVNRAWRVQFNSAIGPYKGGMRFHPSVN
                     LSILKFLGFEQTFKNALTTLPMGGGKGGSDFDPKGKSEGEVMRFCQALMTELYRHLGP
                     DTDVPAGDIGVGGREVGFMAGMMRKLSNNSACVFTGKGLSFGGSLIRPEATGYGLVYF
                     TEAMLKRHGLGFEGMRVAVSGSGNVAQYAIEKAMAFGARVVTASDSSGTVVDESGFTP
                     EKLARLCEIKASRDGRVADYAREFGLTYLEGQQPWSVPVDIALPCATQNELDVDAARV
                     LIANGVKAVAEGANMPTTIEATDLFLEAGVLFAPGKAANAGGVATSGLEMAQNAARLS
                     WKAEKVDARLHHIMLDIHHACVKYGGDNKHTNYVQGANIAGFVKVADAMLAQGVI"
     gene            complement(5926..7875)
                     /gene="topB"
                     /locus_tag="MOX77_001769"
     CDS             complement(5926..7875)
                     /gene="topB"
                     /locus_tag="MOX77_001769"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase III"
                     /protein_id="HCA3357317.1"
                     /translation="MRLFIAEKPSLGRAIADVLPKPHRKGDGFIECGNGQVVTWCIGH
                     LLEQAQPDAYDSRYARWNLADLPIVPEKWQLQPRPSVTKQLNVIKRFLHQAGEIIHAG
                     DPDREGQLLVDEVLDYLQLPAEKRQQVRRCLINDLNPQAVERAIDRLRANSDFVPLCV
                     SALARARADWLYGINMTRAYTILGRNAGYQGVLSVGRVQTPVLGLVVRRDEEIENFVA
                     KDFFEVKAHIVTPADERFTAIWQPSEACEPYQDEEGRLLHRPLAEHVVNRINGQPALV
                     TSYNDKRESESAPLPFSLSTLQIEAAKRFGLSAQNVLDICQKLYETHKLITYPRSDCR
                     YLPEEHFAGRQAVMNAISVHAPDLLPQPVVNPDTRNRCWDDKKVDAHHAIIPTARSSS
                     VHLTENEAKVYTLIARQYLMQFCPDAVFRKCVIELEIAKGKFVAKARFLAEAGWRTLL
                     GSKERDEENDGTPLSVVAKGDELLCEKGEVVERQTQPPRHFTDATLLSAMTGIARFVQ
                     DKDLKKILRATDGLGTEATRAGIIELLFKRSFLTKKGRYIHSTDAGKALIHSLPEMAA
                     RPDMTAHWESVLTQISEKQCRYQDFMQPLVGTLYQLIDQAKRTPVKRFRGIVAPGGGE
                     KKKSAPRKRAGKKSPPAEETGRQTE"
     gene            complement(7880..8923)
                     /gene="selD"
                     /locus_tag="MOX77_001770"
     CDS             complement(7880..8923)
                     /gene="selD"
                     /locus_tag="MOX77_001770"
                     /EC_number="2.7.9.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenide, water dikinase SelD"
                     /protein_id="HCA3357318.1"
                     /translation="MSKQAIRLTQYSHGAGCGCKISPKVLETILHSEQAKFVDPNLLV
                     GNETRDDAAVYDLGNGTSIISTTDFFMPIVDNPFDFGRIAATNAISDIFAMGGKPIMA
                     IAILGWPINTLSPDIAREVTEGGRFACRQAGIALAGGHSIDAPEPIFGLAVTGVVPTE
                     RVKKNSTAQAGCKLFLTKPLGIGVLTTAEKKSLLKPEHQGLATEVMCRMNVAGAAFAN
                     IDGVKAMTDVTGFGLLGHLSEMCQGAGVQAMLCYQDIPKLPGVEEYIALGAVPGGTER
                     NFASYGHLMGDMSREVRSLLCDPQTSGGLLLAVTPDAEDDVKATAAEFGIELTAIGEL
                     VEARGGRAMVEIR"
     gene            complement(9041..9592)
                     /locus_tag="MOX77_001771"
     CDS             complement(9041..9592)
                     /locus_tag="MOX77_001771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H nitroreductase"
                     /protein_id="HCA3357319.1"
                     /translation="MDALELLVNRRSASRLAEPAPVGEQLQNILRAGMRVPDHKSLQP
                     WRFFVIEGEGRDRFSAVLEQGAVAAGGDEKAIEKARNAPFRAPLIITVVAKCEENHKV
                     PVWEQEMSAGCAVMAMQMAAIAQGFNGIWRSGALTESAIVREAFECRPQDKIVGFLYL
                     GTPQLKASTTISTPDPTPFVRYF"
     gene            9766..11622
                     /gene="sppA"
                     /locus_tag="MOX77_001772"
     CDS             9766..11622
                     /gene="sppA"
                     /locus_tag="MOX77_001772"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptide peptidase SppA"
                     /protein_id="HCA3357320.1"
                     /translation="MRTLWRFIAGFFKWTWRVLNFVREMVLNLFFIFLVLVGVGIWMQ
                     IGNGSNSEQTARGALLLDISGVIVDKPSTNHRLGALGRQLFGASSDRLQENSLFDIVN
                     AIRQAKDDRNITGIVLDLKNFTGADQPSMRYIGKALREFRDSGKPVFAVGENYSQGQY
                     YLASFANKIWLSPQGQVDLHGFATNGLYYKTLLDKLKVSTHVFRVGTYKSAVEPFIRD
                     DMSPAAREADSRWIGELWQNYLHTVSANRQISPQQLFPGAQAIIDGLTSVGGDTAKYA
                     LDHKLVDALASSADVEKALTKQFGWSKTENNYRAISYYDYSLKTPADTGGTIAVIFAN
                     GAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIVLRVNSPGGSVNASEVIRAELAAA
                     RAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLTGSIGIFGVINTVENSLSSIGV
                     HSDGVSTSPLADISMTKALSPEVQQMMQLSIEYGYKRFITLVADARKRTPEQIDKIAQ
                     GHVWTGEDAKANGLVDSLGDFDDAVAKAAELAKLKQWHLDYYQDEPTVLDMVMDSMTG
                     SVRAMLPEAIQAMLPAPLVSAANTVKAEGDKLAAFNDPQNRYAFCLTCANVR"
     gene            11718..12734
                     /gene="ansA"
                     /locus_tag="MOX77_001773"
     CDS             11718..12734
                     /gene="ansA"
                     /locus_tag="MOX77_001773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HCA3357321.1"
                     /translation="MQKKSIYVAYTGGTIGMQRSDKGYIPVSGRLQRQLALMPEFHRP
                     EMPDFTIHEYAPLMDSSDMTPEDWQHIAADIKAHYDEYDGFVILHGTDTMAYTASALS
                     FMLENLGKPVIVTGSQIPLAELRSDGQINLLNALYVAANYPVNEVTLFFNNRLFRGNR
                     TTKAHADGFDAFASPNLPPLLEAGIHIRRLNTPPAPYGSGELIVHPITPQPIGVVTIY
                     PGISAEVVRNFLRQPVKALILRSYGVGNAPQNKAFLQELKEASSRGIVVVNLTQCMSG
                     RVNMGGYATGNALAHAGVIGGADMTVEATLTKLHYLLSQGLDTQAIRSAMAQNLRGEL
                     TPDD"
     gene            12761..13417
                     /gene="pncA"
                     /locus_tag="MOX77_001774"
     CDS             12761..13417
                     /gene="pncA"
                     /locus_tag="MOX77_001774"
                     /EC_number="3.5.1.-"
                     /EC_number="3.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional nicotinamidase/pyrazinamidase"
                     /protein_id="HCA3357322.1"
                     /translation="MTNRALLLVDLQNDFCAGGALAVAEGDSTIDIANALIDWCQPRQ
                     IPVLASQDWHPAQHGSFASQHQAEPYRQGKLDGLPQTLWPDHCVQHTDGAALHPLLNQ
                     HAIDACIYKGENPLIDSYSAFFDNEHRQKTTLDTWLREHDVTELIVMGLATDYCVKFT
                     VLDALELGYAVNVITDGCRGVNIHPQDSAHAFMEMAAAGATLYTLADWEETQGQAIAR
                     "
     gene            complement(13768..14046)
                     /locus_tag="MOX77_001775"
     CDS             complement(13768..14046)
                     /locus_tag="MOX77_001775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeaC family protein"
                     /protein_id="HCA3357323.1"
                     /translation="MNLDEIINSMTPEVYQRLSTAVELGKWPDGVALTPEQKENSLQL
                     VMLWQARHNTEAQHMTIDTHGQMVMKSKQQLKADFGITSKPIATLKMQ"
     gene            complement(14088..14501)
                     /gene="msrB"
                     /locus_tag="MOX77_001776"
     CDS             complement(14088..14501)
                     /gene="msrB"
                     /locus_tag="MOX77_001776"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HCA3357324.1"
                     /translation="MANQPSAEELKKKLSEMQFYVTQDRGTEPPFTGRLLHNKRDGVY
                     HCLVCDTPLFHSHTKYDSGCGWPSFYQPVSEEAIRYIDDFSHGMQRVEIRCGNCDAHL
                     GHVFPDGPQPTGERYCVNSASLAFSDEKNGDQLKG"
     gene            14843..15838
                     /gene="gapA"
                     /locus_tag="MOX77_001777"
     CDS             14843..15838
                     /gene="gapA"
                     /locus_tag="MOX77_001777"
                     /EC_number="1.2.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006322611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HCA3357325.1"
                     /translation="MTIKVGINGFGRIGRIVFRAAQKRSDIEIVAINDLLDAEYMAYM
                     LKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGIFLT
                     DETARKHITAGAKKVVLTGPSKDNTPMFVKGANFDKYEGQDIVSNASCTTNCLAPLAK
                     VINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKV
                     LPELNGKLTGMAFRVPTPNVSVVDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYTE
                     DDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSWYDNETGYSNKVLDLIAHISK"
     gene            16167..17051
                     /locus_tag="MOX77_001778"
                     /pseudo
     CDS             16167..17051
                     /locus_tag="MOX77_001778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460255.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="D-hexose-6-phosphate mutarotase"
     gene            complement(17150..18007)
                     /locus_tag="MOX77_001779"
     CDS             complement(17150..18007)
                     /locus_tag="MOX77_001779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HCA3357326.1"
                     /translation="MKSVKNVTFCGQVTLPAIGQGTWYMGERADQRQREVSALRAGLD
                     LGLRLIDTAEMYADGGAEKVVGEALAGRRDEAFLVSKVYPWNAGGQKIVAACEESLRR
                     LKTDYLDLYLLHWAGGFSFEETVEGMERLIAQGKIRRWGVSNLDYDDMQALWRIPGGQ
                     QCATNQVLYHLASRGIEYDLLPWCQQQRMPVMAYSPLAQAGRLRSGLLNHPVVNEIAQ
                     AHNATAAQILLTWVIAHPGVMAIPKAGSTEHVKQNAAALEITLSANELALLDNAWPAP
                     KGKTALDMV"
     gene            complement(18105..19301)
                     /locus_tag="MOX77_001780"
     CDS             complement(18105..19301)
                     /locus_tag="MOX77_001780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic sulfatase maturase"
                     /protein_id="HCA3357327.1"
                     /translation="MSIVFNTVAKPSGSLCNLSCKYCFYLDKPRGQRVMSDDVLETYI
                     RRVIDDTPSSEVSFCWQGGEPTLCGLSFYQKVVCLQQRYANGKTIYNSLQTNGVLINE
                     EWAAFFVQHQFLIGISIDGPQVVHDNYRRTPSGRASFSRVVNAIRLLQANDVEFNTLT
                     VVNDASCRHGNAIYHFLTQELESKHLQFIPIVEPLAQKAQRSLTLSDNEDSPSLMPFS
                     VTPEGWGAFMCDVFDQWIRHDVGRIFVQLFDNLLGVWMGEPATLCTMQSTCGQSLLVE
                     QNGDVFSCDHFVFPAYKLGNLQQHSLEEMAASPFQQQFGAAKANLSSRCQNCTWRFAC
                     HGGCPKHRICMDGGERQNYLCKGYLEFFQHVTPYMNVMRQLLLNQRPAAHITRIVDMI
                     ADDVRQ"
     gene            complement(19591..20337)
                     /locus_tag="MOX77_001781"
     CDS             complement(19591..20337)
                     /locus_tag="MOX77_001781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MipA/OmpV family protein"
                     /protein_id="HCA3357328.1"
                     /translation="MTKLKLLALGVFIATSASVAHAESNLTLGAGVGVVEHPYKDYDS
                     DVYPIPVIAYESENFWFRGLGGGYYLWNDNADKLSIMAYWSPMYFKPGDSDDHQLRRL
                     DRRKSTMMAGVSYAHHTQYGFLRTSLAGDTLDNSNGIVWDLAWLYRYTNGGLTLTPGI
                     GVEWNSENQNDYYYGVSRKESSRSGLRGYNPNDSWNPYLELSANYNFAGNWSVYGTAR
                     YTRLSDEITDSPMVDKSWTGILSTGVTYRF"
     gene            20763..22697
                     /gene="yeaG"
                     /locus_tag="MOX77_001782"
     CDS             20763..22697
                     /gene="yeaG"
                     /locus_tag="MOX77_001782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase YeaG"
                     /protein_id="HCA3357329.1"
                     /translation="MNIFDHYRQRYEAAKDEEFTLQDFLTICRQDRSAYANAAERLLM
                     AIGEPNMVDTAQEPRLSRLFSNRVIARYPAFEEFYGMEDAIEQIVSYLKHAAQGLEEK
                     KQILYLLGPVGGGKSSLAERLKSLMQRVPIYVLSANGERSPVNDHPLCLFNPQEDAQI
                     LEKEYGIPRRYLGTIMSPWAAKHLHEFGGDITKFRVVKVWPSILEQIAIAKTEPGDEN
                     NQDISALVGKVDIRKLEHHAQNDPDAYGYSGALCRANQGIMEFVEMFKAPIKVLPPLL
                     TATQEGNYNGTEGISALPFNGIILAHSNESEWVTFRNNKNNEAFLDRVYIVKVPYCLR
                     ISEEIKIYEKLLNHSELAHAPCAPGTLETLSRFSTLSRLKEPENSSIYSKMRVYDGES
                     LKDTDPKAKSYQEYRDYAGVDEGMNGLSTRFAFKILSRVFNFDHAEVAANPVHLFYVL
                     EQQIEREQFPQEQAERYLEFLKGYLIPKYAEFIGKEIQTAYLESYSEYGQNIFDRYVT
                     YADFWIQDQEYRDPDTGQLFDRESLNAELEKIEKPAGISNPKDFRNEIVNFVLRARAN
                     NSGRNPNWTSYEKLRTVIEKKMFSNTEELLPVISFNAKTSTDEQKKHDDFVDRMMEKG
                     YTRKQVRLLCEWYLRVRKSS"
     gene            22820..24106
                     /locus_tag="MOX77_001783"
     CDS             22820..24106
                     /locus_tag="MOX77_001783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeaH/YhbH family protein"
                     /protein_id="HCA3357330.1"
                     /translation="MTWFIDRRLNGKNKSTVNRQRFLRRYKAQIKQSISEAINKRSVT
                     DVDSGESVSIPTDDISEPMFHQGRGGLRHRVHPGNDHFIQNDRIERPQSGGGGGSGSG
                     QGQASQDGEGQDEFVFQISKDEYLDLLFEDLALPNLKKNQHRQLNEYKTHRAGFTSNG
                     VPANISVVRSLQNSLARRTAMTAGKRRELHALETELETISHSEPAQLLEEERLRREIA
                     ELRAKIERVPFIDTFDLRYKNYEKRPEPSSQAVMFCLMDVSGSMDQATKDMAKRFYIL
                     LYLFLSRTYKNVEVVYIRHHTQAKEVDEHEFFYSQETGGTIVSSALKLMDEVVKERYD
                     PSQWNIYAAQASDGDNWADDSPLCHEILAKKLLPVVRYYSYIEITRRAHQTLWREYEH
                     LQATFDNFAMQHIRDQEDIYPVFRELFQKQSANQSA"
     gene            complement(24256..24462)
                     /locus_tag="MOX77_001784"
     CDS             complement(24256..24462)
                     /locus_tag="MOX77_001784"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357331.1"
                     /translation="MKRFKEIAAILLFALLAVGFTSSAMASSGSGGGPWDFDIYFPGH
                     YFFCKLQPPDSLQLPPPPGEYCWH"
     gene            24756..24929
                     /locus_tag="MOX77_001785"
     CDS             24756..24929
                     /locus_tag="MOX77_001785"
                     /inference="COORDINATES: protein motif:HMM:NF028464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357332.1"
                     /translation="MNLHHKALRHFISASVIVLTSSFLIYELIASDRAMNAYMRYIME
                     RADSSFLYDKYQN"
     gene            24948..26249
                     /locus_tag="MOX77_001786"
     CDS             24948..26249
                     /locus_tag="MOX77_001786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001258703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HCA3357333.1"
                     /translation="MRTFEAPGDPVTAEKRRAFCDAFEAINGTHGVNLTRHNYPALHG
                     TLQTVATQCTDNLDDALLLPAFDQAVSINRAQDDHSHGLGTLELKFRYYVDLNKHYVY
                     FYDLINSRRFAMHRWTFLQKGTMGINRKDIDKLFTGRTVISSIYMDDITQENVMSFLT
                     PVYLSGSLKGIVMVDVNQDNLKNIFYTQDRPLVWRYLNVTLKDLDSGKEIIINKSKNN
                     LFQYVNYNHDIPGGLRVSLSLDLTYFLVSSWKALAFYLLATALLLNMVRMHFRLYRNV
                     TRENISDAMTGLYNRKILTPVLEQRLQRLVNTGTPVTFVAIDCDRLKLINDTLGHQEG
                     DRIITLLAKAIKTSIRKSDYAIRLGGDEFCIILVDYAADLAIHLPERIIRNLQIIAPD
                     KTVHFSAGIYNMQPNDTINDAYQASDAQLYLNKQQKQHRSS"
     gene            26299..26817
                     /locus_tag="MOX77_001787"
     CDS             26299..26817
                     /locus_tag="MOX77_001787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaK/prolyl-tRNA synthetase associated
                     domain-containing protein"
                     /protein_id="HCA3357334.1"
                     /translation="MAEVAKGVATHQRLVALLTQENARYRVVSHEAVGKCEAVSEIRG
                     TALGQGAKALVCKVKGNGVNQHVLAILAADQQADLSQLASHLGGLRASLASPAEVDML
                     TGCVFGAIPPFSFHPNLKLVADPLLFERFDEIAFNAGLLEKSVIMNTQDYLRIARPEL
                     AVFRRFQSSPTA"
     gene            complement(26814..26915)
                     /locus_tag="MOX77_001788"
     CDS             complement(26814..26915)
                     /locus_tag="MOX77_001788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000272239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357335.1"
                     /translation="MYDPPFLEALMITASFFAIFIIIVVSVLLLEGD"
     gene            27121..>27460
                     /locus_tag="MOX77_001789"
     CDS             27121..>27460
                     /locus_tag="MOX77_001789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460246.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF441 family protein"
                     /protein_id="HCA3357336.1"
                     /translation="MFDVTLLILLGLAALGFISHNTTVAVSILVLIIVRVTPLNTFFP
                     WIEKQGLTVGIIILTIGVMAPIASGTLPPSTLIHSFVNWKSLVAIAVGVFVSWLGGRG
                     ITLMGNQPQLV"
BASE COUNT         6676 a         7348 c         6923 g         6513 t
ORIGIN      
        1 cctgccaaag tatctcctcg ctcaccggat tcgttttgcg gcggcgttcg ccctgaccgg
       61 ttatccagtc gccgtttatc catagcgtca tacggttttc tcctcagcgc aaaggcgtac
      121 cagccgaacg tggtcgcccg cgcgacattt cagcgcatcc aactgcgcgg cggtaagtac
      181 aagtcgtgaa gtctgcggat cggcacgcac cagcgcggcc cgaaagtggt gatagttttc
      241 attggcgacc agacatgcag gatagtcgcc aagcgcgggt tgcccttccg cgacttccac
      301 cagtcggctt ttacgaatag cccgcacgcg gtcaatatca cactccagcg tcggcccacc
      361 gtcgaagatg tcgatatagt ggcgatagcg aaagccttcc ttttccagca ccacgcgggc
      421 tggcgccgtt tgcgggtgga cttcgccaat cacggcctgt gcctcttcag ataagaagtg
      481 ggtataaata ggatgtttgg gcatcagctc ggcgataaac gctttttgcc cggtaccgca
      541 taaaaaatcc gcccggctga aatccataga aaaaagcgtt tgccgagact ttgccagaag
      601 ggagaataac catgctcgtc aatgacaccg cgcatttccg ccaccacttt ctcattgaat
      661 ttatcgcgaa acgcggccat aaacataaag cgcgattttg acaacaagta gccgttaccc
      721 tctttacgcc attcgggatc gagaaacagc gtgcaaagct cactgctgcc ggtatgatca
      781 ttactcagga ataatgttgg caacgcgtta tatacattca gctctttgga agcatgaacc
      841 agcgtaccga cacgatagtt ataccaaggg tcgttaaggc cgaccgcgac ctcaatggcg
      901 cagatcccgc cgacctcacc cgtttcactg tcctcgagaa caaatacata tccttgttcg
      961 ccttttggca gctcgccgga ccaggttttt agcgcgcgtt caatgcgggc cgccagcgtc
     1021 gcttcatttg ccagtagcga ggttaagccg ccgcccgttt tgcctgcaag ctgcatcagc
     1081 gcggcgatat ccgcatgttc gacaggacga atcacccgca tgatgcgcct cccgcctgaa
     1141 ggcgttcgca cgccagggca aaacgatcaa gcccggtagc tatctcctcg tcgctcacat
     1201 ttaacgctgg cgcaaaacgc accacgtcgc caccggcgat gagcaccatc acgcctgctt
     1261 ttgccgcttc ctgggcgatg agtttggctt ttccggcaaa ctccgtctgt agcacacagc
     1321 caagcagtag ccccagcccg cgaatttcac tgaacatgcc aaaacgtaca ttaatggtat
     1381 ttagacgttc aataaacgca tcgtggcgct gtctgacgcc gttttgcatc tccggcgtat
     1441 tgatgatatc cagtactttt ccggcaactg ccgtcgccag cggattaccg ccgtaggtgg
     1501 tgccatgcgt acctggcgtc atgacgctgg catagtcttg cgtagtcagc atcgcgccga
     1561 tcgggaagcc gccgcccaac gctttagcgg tcgtcaggat atcgggcgta acgccataat
     1621 gcatatatgc atacagttcg ccggtacgtc cgacgcccgt ctgcacctca tcaaaaatca
     1681 gtaacgcctg atgccggtcg cacaattcac gcagcccctg caaaaaagcg ttcgtggcgg
     1741 ggatcacgcc gccctcgccc tgcacaggct ctacgattac ggcgcaggta ttgtcatcaa
     1801 tgagcgcgct ggcggagttc agatcgttat aggctgcatg acgaatatcc ggcggcagcg
     1861 gcgcaaagtc ctgtgaatag gtgggttgac cgccagcgct gacggtaaag agcgtgcggc
     1921 catggaacgc gtttttaaag gccacaatgc cgcttttatg gttgccaaca cgatcgtggg
     1981 catatttgcg cgccagtttt aatgcagctt catttgcttc agcgcctgaa ttacaaaaga
     2041 aaacgcgttc ggcgaaggtc gcgtcgatca gttttttcgc cagtcgcagc gccggttcat
     2101 tggtgtaacc gttcccggta tgccagaagc gattcgcctg ttcatttaac gcctcgcgca
     2161 gcgccggatg cgcatgtccc aatgcgttga ccgcaatccc gccagcaaaa tcaatgtact
     2221 ctttcccctg ctgatcccac aggcgtgagc cttctccgcg tacaggaata aaaggcgcgg
     2281 gaacatatac cggcaccatc cattcatcaa agttttcgcg cgtaactgac agagacatag
     2341 cgacctcttt tggtaaaaat aaagttatct atatgttaat taatatgggt gtttgcgctg
     2401 taaatgtaga ttgcagcatt cgtgccagcc agcgttaaca ttgcataaac agaagtgata
     2461 aacggtaaat caatgggtta cagcgtagcg atattcactt ttactgcatg aaaagtgaat
     2521 atttccgcat aatcggtggc tagaaagagg aaaaagcgaa atattattca gttgccaaat
     2581 ataattctgg aattgtgatc ttatacgaaa tttactggaa attaccgccc cgttctggcg
     2641 catctgcacg caaaccgtgc cattttcgcg ctatagaaaa caccatacgc ttccattggc
     2701 cgaatctgac gatgagtggc agtcacccgg taaaatttct gctaccatcc caacacgatt
     2761 caccttgcaa agtggcagtg actatgaaat ttgtctcttt taatatcaac ggcctgcgcg
     2821 cccgtcccca tcaacttgaa gcgattgtcg aaaaacacca gcccgatgtg atcggtctac
     2881 aggagacaaa agtccacgac gaaatgttcc cgctcgaaga ggtcgcgaag ctgggctata
     2941 acgttttcta tcatggacaa aaaggccatt acggcgtcgc gctgctaaca aaagccacgc
     3001 ccatttccgt cagacgcggt tttccggatg atggcgaaga ggcgcaacgc cgcattatca
     3061 tggcggaaat cccctcgccg ctgggtaata tcaccgtcat taacggctat ttcccgcagg
     3121 gggaaagccg ggatcatccg ttgaagttcc ccgcgaaagc gcagttttat cagaacttgc
     3181 aaaactatct tgaaacggaa ctcaagtgcg ataatccggt attaattatg ggcgacatga
     3241 atatcagccc gaccgacctg gatattggca tcggcgaaga gaaccgcaaa cgctggctgc
     3301 gtaccggtaa atgctccttc ctgccggagg agcgtgaatg gatgtcgcgg ttactgaagt
     3361 ggggattagt ggacacgttc cgtcaggcaa atccgcaaac gatggataaa ttttcgtggt
     3421 ttgattaccg ttcaaaaggt ttcgtggata atcgcggact gcgcattgac ctcttgctgg
     3481 caagcgctcc gctggcggaa cgttgcgcag aaaccggtat agactacgac attcgcagta
     3541 tggaaaaacc ctccgaccat gcgccggtct gggcgacgtt tcgtgtttga ttccgctatc
     3601 tgattaaccg taaggccggg atagcgcgac gcttcccggc aggaataacg accttaacga
     3661 caatgataaa aaaactcgat gttgttgccg ccatcattga acgcgacggc aaaatactgc
     3721 tggcccagcg cccagttcat gcggatcaag ccggtttatg ggagtttgcc ggcggtaaag
     3781 tcgaacccgg cgaaacccaa ccgcaggcgc ttatccgcga gctacgcgaa gagttaggga
     3841 ttgacgccac gcccggcgtc tatatcgcca gccatcaacg cgacgtgtct ggccgacgaa
     3901 ttcatttgca cgcctggcat gtgcctgcgt ttaacggtct gatacgtgcg ctggaacatc
     3961 aggccttagc ctggtgtacg ccggaagagg cgctggaata ccccctcgcc ccggcggata
     4021 ttccgctatt gcaggcgttt atggctttac gcgacgccag actaacggat ttgtgctgat
     4081 ggttttttcg tcacgctggc actggagcac gacgccttcc acttttatta ccgcgccttc
     4141 ggagtaattc tgatcctggt aaacgcagca ctgaatgcag ggctgggatg actgaccgcg
     4201 cgtgctgaaa acttccggcg ggacattcac ctgaatatca ggacgactgt tttggtttgc
     4261 cagcccgacc attggcatta tcgccatcac ggcgaccatg aggcttcggc gcataggatt
     4321 tccttatttt tccaagtata ttctcagtat aacggtaagc cgccgtgaaa actttaatcc
     4381 tcttttgtca tcgcttttag ttatgaccct ctccccgtta tgaatttact tagcagcgtc
     4441 atttttttct tgcttaccgt cacattgctg atggtatagt cgaaaactgc aaatacatat
     4501 tctgataaaa cgcaaataca accacattaa tatataagag gtttttatat ctatggatca
     4561 gacatgttct ctggaatcgt tcctcaacca tgtacaaaag cgcgacccgc atcaaaccga
     4621 gttcgcgcaa gccgtccgtg aagtcatgac caccctgtgg ccgtttcttg aacaaaaccc
     4681 ccgttaccgc cacatgtctt tactggaacg tttggttgaa ccagagcgcg taatccagtt
     4741 tcgcgtagtg tggctggacg ataaaaatca ggtgcaggta aatcgcgcct ggcgcgtgca
     4801 gttcaactct gctatcggcc cctataaagg cggtatgcgc ttccatcctt cggtaaacct
     4861 ttccatcctt aagttcctcg gctttgagca aacctttaaa aatgccctca ccacgttgcc
     4921 gatgggcggc ggtaaaggcg gcagcgattt cgatccgaaa gggaaaagcg aaggcgaagt
     4981 gatgcgtttc tgccaggcgc tgatgactga actgtatcgc catttagggc cggataccga
     5041 cgtgcctgcc ggggatatcg gcgtgggcgg gcgcgaagtg ggctttatgg cgggaatgat
     5101 gcgcaagctt tccaataaca gcgcctgcgt cttcaccggc aaagggcttt ccttcggcgg
     5161 cagcctgatt cgtccggagg cgacgggcta tggcctggtc tacttcaccg aagcgatgct
     5221 taaacgtcat ggtctcggtt ttgaagggat gcgcgtcgcc gtgtccggct ccggcaacgt
     5281 agcgcaatac gccattgaga aagcgatggc ctttggcgcg cgcgtggtta ccgcgtcgga
     5341 ttcgagcggg acggtggtcg atgaaagtgg cttcacgcca gagaagctgg cgcggctgtg
     5401 tgaaattaaa gccagccgtg acggtcgcgt cgctgactac gcccgtgagt ttggcttaac
     5461 ctatctggaa ggccagcagc cctggagcgt accggtggat atcgccctgc catgcgcgac
     5521 gcagaacgaa ctggacgttg acgccgcgcg cgtactgatt gccaatggcg tgaaagccgt
     5581 ggcggaaggg gcaaatatgc caaccacgat tgaagcgacc gatctcttcc ttgaggcggg
     5641 cgtactgttt gcgccgggta aagccgccaa cgcgggcggc gtggcgacat cggggctgga
     5701 aatggcgcag aacgccgcgc ggttgagctg gaaagccgag aaagtggacg cccgtctgca
     5761 tcatattatg ctggatatcc accacgcctg tgtcaagtac ggcggcgaca ataagcatac
     5821 taactacgtt cagggcgcca acatcgccgg tttcgtgaaa gtcgccgacg ccatgctggc
     5881 gcagggcgtc atttaatccc gtcgccaggc cagatggctt tacgcttatt cggtctgacg
     5941 gcctgtctcc tcagcaggcg ggcttttttt gcccgctcgc ttacgcggcg cgctcttttt
     6001 cttttctccg ccgcctggcg cgactatccc tctgaaacgc ttcaccggcg tgcgcttagc
     6061 ctgatcgatc agctgatata acgtgccgac cagcggttgc ataaaatcct ggtaacggca
     6121 ctgcttttcg ctgatttgcg tcaaaacaga ttcccagtgc gcggtcatat ctggacgggc
     6181 cgccatctcc ggcagcgaat gtattaacgc tttgccagca tcggtagaat gaatgtagcg
     6241 cccttttttg gtcagaaagc tacgtttgaa cagcagttcg ataatcccgg cgcgcgtggc
     6301 ttccgtcccc agcccatcgg tcgcgcgcag gatctttttc agatctttat cctgcacgaa
     6361 gcgggcaatt ccggtcatcg cggaaagcaa tgtcgcatca gtgaaatgac gcggcggctg
     6421 ggtttggcgt tcgaccactt cccccttttc acacagcaac tcatcacctt tggcgacaac
     6481 cgacagcggc gtaccgtcgt tttcctcgtc gcgctcttta ctgcccagta acgtccgcca
     6541 accggcctcc gccagaaaac gcgctttggc gacaaatttc cctttggcga tttccagttc
     6601 aataacgcat ttacgaaaca ccgcgtccgg gcagaactgc atcagatact gacgcgcaat
     6661 cagggtgtac actttcgctt cgttttccgt cagatggaca gaagaactgc gcgccgtcgg
     6721 gataatcgcg tggtgcgcat ccactttttt gtcatcccag cagcgattgc gcgtatcagg
     6781 attaaccaca ggctgcggca gtaaatccgg ggcgtggacg ctaatcgcgt tcatgaccgc
     6841 ctgccgtccg gcaaagtgtt cttccggcag ataacggcag tcggaacgcg gataggtaat
     6901 cagtttgtgg gtttcatata gcttctgaca aatatcaagc acgttttgcg cgctcaggcc
     6961 aaaacgttta gcggcttcaa tctgtagcgt cgagagcgaa aacggcagcg gcgcggattc
     7021 tgattcccgt ttatcattat aactggttac cagcgcaggc tgaccgttga ttcggttcac
     7081 cacatgctcc gccagcggac gatgaagcaa acgcccctct tcatcctgat aaggttcgca
     7141 cgcctcgctc ggctgccaga tagcggtaaa acgctcgtcg gcaggcgtaa cgatgtgcgc
     7201 cttcacttca aagaagtctt tggcgacgaa gttctcaatc tcttcgtctc gccgcaccac
     7261 cagccccagt accggcgtct gcacgcgtcc cacggataac acgccctgat agccggcatt
     7321 acggcccagg atcgtgtaag cacgggtcat attaatgcca tacagccagt ccgctcgcgc
     7381 tcgcgccagc gcggagacgc acagcggcac gaagtcgctg ttcgcccgca gcctgtcgat
     7441 agcacgctcg accgcctgcg ggttaaggtc gtttatcaga caacgccgta cctgctggcg
     7501 cttttcggca ggaagctgga gataatccag cacttcatca accagaagct gcccttcgcg
     7561 atccgggtcg ccggcgtgaa taatttcacc ggcttgatgc aaaaagcgct taatcacatt
     7621 gagctgtttg gtgacggaag gacgaggctg aagctgccat ttttccggca cgataggcag
     7681 gtcagccaga ttccagcgcg cataacggct gtcatacgca tccggctgcg cctgttccag
     7741 caaatgacca atacaccagg tgacgacctg cccgtttccg cactcaataa aaccatcgcc
     7801 tttacggtgc ggttttggca gcacatccgc aatggcgcgc cccagactcg gtttttcggc
     7861 aataaacaac cgcatcaggt taacgaatct caaccatagc gcgaccgccg cgggcctcga
     7921 ccagttcgcc aatcgcggtc agttcgatac caaattccgc cgcggtggct ttaacatcgt
     7981 cttcggcgtc cggcgttacc gccaacagca gaccgcctga cgtttgcgga tcgcacagca
     8041 ggctacgaac ttcacgcgac atgtcgccca tcagatgacc atagctggcg aagttgcgct
     8101 ctgtgccgcc cggtacggcg cccagagcaa tatactcttc cacgcccggc agtttaggga
     8161 tgtcctgata gcaaagcatc gcctgtacgc ctgcaccctg gcacatctcg ctcaggtgtc
     8221 ccagcagacc aaaaccggta acgtcagtca tggcttttac gccgtcgata ttggcaaacg
     8281 ccgcgccagc aacgttcatc cgacacatga cttccgtcgc cagcccctga tgttcaggtt
     8341 taagcagcga ttttttctcg gcggtggtca acacgccaat ccccaacggt ttggtcagaa
     8401 agagtttgca tcccgcctgc gcggtactgt ttttcttcac ccgttcggtc ggcactacgc
     8461 ctgtgaccgc gagaccaaag atcggctccg gggcgtcaat agagtgtccg cccgccagcg
     8521 cgataccggc ctgacggcag gcaaaacgcc ccccctcggt cacttcacgc gcaatatcgg
     8581 gcgacagggt attaatcggc cagccaagga tcgcgatcgc cataatcggt ttgccgccca
     8641 tcgcaaaaat atcgctgatg gcgtttgttg ccgcaatgcg gccaaaatca aacgggttgt
     8701 cgactatcgg cataaagaag tcagtggtgc tgataatact ggtgccatta cccagatcgt
     8761 aaactgccgc atcatcgcgg gtttcattac ccaccagcag attcgggtcg acgaacttcg
     8821 cctgctcgct atgcaggata gtctccagca ctttagggga aattttacaa ccgcaaccag
     8881 cgccgtggct gtattgcgtt aaacgaatgg cttgcttgct catggacatc tcctgtcatt
     8941 gcattcgcgc tatggtagcg ctcattccct gatgtggtaa gtatcactgt ctgaattacc
     9001 gcgcctttgc tcagaatcca gacagtttta tccctcagcg tcagaaataa cgcacaaacg
     9061 gcgtggggtc gggggtactg atcgtcgttg acgctttgag ctgcggcgtg ccgagataga
     9121 gaaaaccaac aattttatcc tgaggacggc actcaaaggc ttcccgcacg atagcgctct
     9181 ccgttaatgc gccgctacgc cagataccat taaacccttg cgcaatcgct gccatttgca
     9241 tcgccatcac cgcgcatccg gcagacatct cctgttccca cacgggaacc ttatggtttt
     9301 cttcgcattt cgccaccacg gtaatgatca gcggcgcgcg aaacggcgca ttacgcgctt
     9361 tttcgatcgc tttctcatcc cccccggcag cgacagcgcc ttgttcaagc acggcgctga
     9421 agcggtcgcg cccctctcct tcaatcacaa aaaaacgcca cggctgtaga gatttatgat
     9481 cgggaacacg cattcccgcc cgcagaatgt tctgtaattg ctctccgaca ggcgccggtt
     9541 ctgcgagacg agaggcgctg cgacggttga ccagcagttc tagtgcatcc atttgattaa
     9601 ctccagcaat gatatttatt cacaaaatta acacgggagc ggattttgtt acagcgcagg
     9661 cagtgattcc tgctgacaac tgcctgatgg gtcattacga tagccacatc ttaatgcttt
     9721 atcctcacca aggtataagc gttgttactc agatagggag aatacatgcg aaccctgtgg
     9781 cgatttattg ccggattttt taaatggacg tggcgagtgt tgaacttcgt ccgtgaaatg
     9841 gtactcaacc tgttctttat ttttctggtc ctggtgggcg ttgggatctg gatgcagatc
     9901 ggtaacggca gcaacagtga gcaaacggcg cgcggcgctt tgctgctgga tatttccggc
     9961 gtcattgtgg ataaaccctc caccaatcac cgtctgggcg cgctgggacg ccagttattt
    10021 ggcgccagct ccgaccgtct gcaggaaaac tccctgtttg acatcgtcaa cgctattcgt
    10081 caggcgaaag atgaccgtaa catcacgggt atcgttctgg atctgaaaaa cttcaccggt
    10141 gccgatcagc cgtcaatgcg ctatatcggt aaagcgctgc gcgaattccg cgatagcggc
    10201 aaaccggttt tcgccgtggg tgaaaactac agccagggtc agtattacct cgccagtttc
    10261 gccaataaaa tttggctttc cccacagggt caggtagatc ttcacggctt cgctacgaat
    10321 ggcctgtact acaaaacgct gctggataaa ctgaaagtct ctacccacgt tttccgggtc
    10381 ggcacctata aatccgccgt cgagccgttt atccgcgacg atatgtcgcc cgccgcccgc
    10441 gaggccgaca gccgctggat aggcgaactg tggcagaact acctgcatac cgtttccgcc
    10501 aatcgccaga tttcgccgca acaactcttc cccggcgccc aggctattat cgacgggtta
    10561 accagcgtgg gcggtgacac cgccaaatat gcgctcgacc ataaactggt ggacgccctc
    10621 gcctccagcg cagatgttga aaaagcgctg acgaagcagt ttggctggag caaaaccgaa
    10681 aataactatc gcgcgatcag ctattacgat tattcgctga aaacgcctgc ggataccggc
    10741 ggtactattg cggttatttt cgccaatggc gcgattatgg atggcgaaga aacgccaggg
    10801 aatgtcggcg gcgacactac ggcatcgcag atccgcgacg cacgccttga tcctaaagtg
    10861 aaagcgattg tgctgcgcgt caatagccca ggcggtagcg tcaacgcctc cgaagttatc
    10921 cgcgccgaac tggcggcggc aagagcggct ggcaaaccgg tggtggtctc aatgggcggc
    10981 atggcggcct ccggcggtta ctggatctct acgccggcaa actatatcgt ggccagcccc
    11041 agcacgctga cgggttcaat tggcatcttc ggcgtaatta atacggtaga aaacagcctg
    11101 tcgtcgattg gcgtacacag cgacggcgtt tccacctcgc cgctggcgga tatttcgatg
    11161 actaaagcgc tgtcaccgga agtgcagcag atgatgcaac tcagtattga gtacggctac
    11221 aaacgcttta tcacgctggt ggcagacgcg cgtaagcgta cgccggagca gattgacaaa
    11281 atcgctcaag gccatgtctg gaccggagaa gacgcgaaag ccaatggtct ggtggacagt
    11341 ctcggcgact ttgacgacgc cgtcgccaaa gcggcggagc tggcgaaact gaaacagtgg
    11401 catcttgatt actatcagga cgaaccgaca gtccttgata tggtcatgga cagtatgacc
    11461 ggatctgtac gcgccatgct gccggaggcc attcaggcga tgctcccggc gccgctcgtt
    11521 tccgccgcca acacggtgaa ggccgagggg gataaactgg cggcatttaa cgatccacaa
    11581 aaccgttatg cgttctgttt gacttgcgcg aacgtgcgct aatgcttcat caatagccat
    11641 accggatgtc ggcgtctgct catagccgcc atccgataat cattaatacg tccttcgcga
    11701 cacgactgaa cattatcatg caaaagaaat caatttacgt tgcctatacc ggcggtacta
    11761 tcggtatgca gcgctccgat aaagggtata tcccggtgtc cgggcgcctt cagcgtcagc
    11821 tggcgctgat gccggaattc caccgcccgg agatgccgga ttttaccatc catgaatatg
    11881 ccccgctgat ggattcatca gatatgacgc cggaagactg gcagcatatc gctgcagata
    11941 tcaaagcgca ctacgatgag tatgacggtt ttgttattct gcacggcacc gacacgatgg
    12001 cgtataccgc atcggcgctc tctttcatgc tggaaaatct gggtaaaccg gttattgtga
    12061 cagggtcaca aattccgctg gctgagctgc gctccgacgg gcaaattaat ttgctgaatg
    12121 cgctttatgt cgccgccaac taccctgtta atgaagtaac gctgtttttt aataatcgtc
    12181 tgttccgcgg caatcgcacg accaaagcac atgcggatgg ttttgacgct tttgcctctc
    12241 ctaatctgcc gcccttgctg gaagcaggaa ttcacattcg ccgtttaaat acgcctcccg
    12301 cgccctacgg ttctggtgaa ttaatcgttc accctattac gccgcagccg ataggcgtag
    12361 tgacgattta tccggggatt tccgccgagg tagtacgtaa ctttctgcgt cagccggtaa
    12421 aagcgctgat tctgcgctct tatggcgtag gcaacgcgcc gcaaaataaa gcgtttttac
    12481 aggagctgaa agaggccagt tcgcgcggca tcgtggtggt taacctgacg caatgcatgt
    12541 cagggcgagt caatatgggc gggtacgcta ccggtaatgc gctggcgcac gctggcgtga
    12601 ttggcggtgc cgatatgacc gtcgaagcta ccttaaccaa actgcattat ttgttaagcc
    12661 agggtctgga cactcaggcg attcgtagcg cgatggcgca aaacttgcgt ggtgaattga
    12721 cgccggatga ttaaaaaatc ccgacgacaa ggagaagata atgacaaacc gggccttatt
    12781 actggtcgac ttgcaaaatg acttttgtgc cggcggcgcg ctggctgtag cggaaggcga
    12841 cagcaccatc gacatcgcca acgctcttat tgactggtgc cagccccggc agattccggt
    12901 gctggccagc caggactggc atcccgcgca gcatggcagc ttcgccagcc agcatcaggc
    12961 ggaaccctat agacagggaa agctggacgg gctgccgcaa acgctctggc cggatcactg
    13021 cgttcaacat accgacggcg cggcgttaca tcccctgctt aaccaacatg cgattgacgc
    13081 ctgcatctat aaaggtgaaa acccgctgat tgatagctac agcgcgtttt ttgacaacga
    13141 acatcggcag aaaactaccc ttgatacctg gcttcgcgag catgacgtta ccgagcttat
    13201 cgtgatgggg ttggcgaccg attactgcgt aaaatttacg gtgctggatg cgctagagtt
    13261 gggctatgcc gttaacgtta tcaccgatgg ctgtcgcggc gtgaatattc acccgcagga
    13321 tagcgcacac gcgtttatgg agatggcggc ggcaggcgcg acgctgtata cgctggcaga
    13381 ctgggaagag acgcagggcc aggctatcgc caggtagcgg agcaggtatc gtatccggtc
    13441 aatacatcac gcaacggtga gaccattgca tagatctttg ggccggatac gtcacgtcag
    13501 cgtcgctacc aggcaaagct caacgcaggc tggagagcgc ttctaacgaa acagattaaa
    13561 aagcgcgggc tggccggcgc aatgttctgg gaataggccg ccaatgacaa taatcagtta
    13621 gcgaaacagt tggcggactc gctggacatt aagcgtaatg ggtaaaaata tggcgggcct
    13681 gtgcctgaca gcaatgagca ggcccggtaa gcacaacgca ttggcaatta aaccaccgga
    13741 tggcgactac ctcttatccg gctgccgtta ctgcattttc aatgtcgcaa tcggctttga
    13801 cgtaataccg aaatccgctt tgagctgctg cttgcttttc atcaccatct gaccgtgagt
    13861 atcgatcgtc atatgttgcg cttcggtatt gtgccgcgcc tgccatagca tcaccagttg
    13921 caggctgttt tctttctgtt ccggcgtcaa cgccacgcca tccggccatt tacccagctc
    13981 aacggcggtg gataaacgtt gatacacttc cggcgtcatg ctgttaatga tctcatcaag
    14041 attcatgatg tgtccgctcc tgtggaataa tttgctgaat cgttttttca gcctttcagt
    14101 tgatcgccgt ttttctcgtc agaaaaggcc agcgaggccg agttaacgca atagcgctca
    14161 ccggttggct gcggcccgtc cgggaaaacg tgtccgagat gcgcatcgca gttaccgcaa
    14221 cgaatttcga cacgctgcat gccatgagaa aaatcgtcta tgtaacgaat cgcctcttcg
    14281 ctgacaggct ggtaaaagct aggccagccg cagcctgaat cgtatttggt gtgggagtga
    14341 aaaagcggcg tatcacagac caggcagtga taaaccccat cgcgtttatt atgtagcagg
    14401 cgtccggtaa atggcggttc tgtgccacga tcctgcgtca catagaattg catttcggac
    14461 aattttttct tgagttcttc tgctgaaggt tggttagcca tttgctcaca tctcacttta
    14521 aacgtgctca cattgcctga ccgattctaa caaaacatta gcacctcagt accaactttt
    14581 gttctaaact tgatcattgc gaaatggcgg ctcacgaatc gtgactgatg tcacattatt
    14641 atctcggttg ccctttaaaa ttcggggcgg cgcccccatg tggtttcaag ctgaaaggaa
    14701 gagtgaggcg aatcagccgc gcaaaggttg tgcagaggat tgatttgtcg caatgattga
    14761 cacgattccg cttgacgctg cgtaaggttt ttgtaatttt acaggcaacc ttttattcac
    14821 taacaaatag ctggtggaat atatgactat caaagtaggt atcaacggtt ttggccgtat
    14881 cggtcgcatt gttttccgtg ctgctcagaa acgttctgac atcgagatcg ttgcaatcaa
    14941 cgacctgtta gacgcagagt acatggcata catgctgaaa tatgactcca ctcacggccg
    15001 tttcgacggt actgttgaag tgaaagacgg tcatctgatc gttaacggta aaaaaatccg
    15061 tgttaccgct gaacgcgatc cggctaacct gaaatgggac gaagttggtg ttgacgtagt
    15121 ggctgaagct accggtatct tcctgactga cgaaaccgcg cgtaaacaca tcaccgctgg
    15181 cgcgaaaaaa gtggttctga cgggtccgtc taaagacaac accccaatgt ttgttaaagg
    15241 cgctaacttt gacaaatacg aaggccagga catcgtttcc aacgcttcct gcaccacaaa
    15301 ctgcctggcg ccgctggcta aagttatcaa cgacaacttc ggcatcatcg aaggtctgat
    15361 gactactgtt cacgcgacta ccgcaaccca gaaaaccgtt gacggcccgt ctcacaaaga
    15421 ctggcgcggc ggccgcggcg catctcagaa catcatcccg tcctctactg gcgctgctaa
    15481 agcggtaggt aaagtactgc cggaactgaa tggcaaactg actggtatgg cgttccgcgt
    15541 tccgactccg aacgtatccg ttgttgacct gaccgttcgt ctggaaaaag cggctaccta
    15601 cgagcagatc aaagctgctg ttaaagctgc tgccgaaggc gaaatgaaag gcgttctggg
    15661 ttacaccgaa gacgacgttg tatctaccga tttcaacggc gaagtatgca cttccgtgtt
    15721 cgatgctaaa gcaggcatcg cgctgaacga caacttcgtg aaactggtct cctggtacga
    15781 taacgaaacc ggttactcca acaaagtact ggacctgatt gctcacatct ccaaataagt
    15841 tgagatgaca cagtcattgg taagagcgac tcaggtcgct cttttttttg cttaaagata
    15901 tacccgtcat acttcaagtt gcaggtgtgt tggctatgct ttctcacccg aatcactgac
    15961 ggaagtcgaa cttatcggga tgaatcaggg atgcccctga ccgaaggtta cctacggttg
    16021 ttcaaattcg ttcccgatga atttgtcgtt cacttgccgc gttactcggc ctgcggcctc
    16081 gcctctacgg gccagcgcaa gcactggtca aggcacaagc gccttgtcat gcaactcgaa
    16141 ttatttaggg ttaagaggat tgcgtaatga ttaataaaat ttttgccctc ccggttatcg
    16201 aacagcttac ccctgtcctt tcccgtcgtc agcttgatga cctggatctg atcgtcgttg
    16261 accatccgca ggttaaagcc tcttttgcat tacagggcgc gcaccttctc tcctagaaac
    16321 ccattggcga ggaagaggta ttgtggctca gtaataatac gcctttcaaa accggcgtgg
    16381 cgctacgcgg cggcgtaccg atctgctggc cctggtttgg acctgcggct caacagggtc
    16441 tgccgtcaca cggctttgcg cgtaatcttc cgtgggcgct aaaagcgcat aatgaagatg
    16501 ataatggcgt aatgctgaca tttgagctgc aaagcagtga ggccacccgg aaatactggc
    16561 cgcacgattt cacgctgctg gcacgtttta aagtgggtaa aacctgtgaa attgaactgg
    16621 aagcgcatgg cgaatttgca accacatccg cgctccacag ctattttaac gttggcgaca
    16681 tcgccaacgt taaggtcagc ggactcggcg atcggtttat tgataaagtt aacgacgcta
    16741 aagaagatgt cctagccgac ggtatacaaa cctttccgga ccgtaccgat cgcgtttacc
    16801 tcaatcctga agcatgtagc gtgatccacg atgcgacatt aaaccgcacg attgatgtgg
    16861 tccaccacca tcaccttaac gtcgtaggct ggaaccctgg cccggcgttg tccgtcagca
    16921 tgggcgacat gccggatgac ggctataaaa cgtttgtctg cgttgaaacg gtttacgcta
    16981 ctgcgccgca acaagccaca gaagaaaaac cctctcgtct ggcgcagact atctgcgtcg
    17041 ctaaacgcta aaagtgaatg gataacggcg ttgctatagg ctctggaagg cgccagccgc
    17101 catcaggcat gacctgccgg atggcggcac ttacacattt tatccggcgt cacaccatat
    17161 ccaacgcggt tttccctttt ggcgcaggcc aggcgttgtc cagtaaggca agttcgtttg
    17221 ctgacaaggt aatctcaagc gccgccgcat tttgcttcac gtgttctgta cttccggctt
    17281 tcgggatcgc catcacgccc ggatgcgcaa tcacccacgt cagtaagatt tgcgccgccg
    17341 ttgcgttatg cgcttgcgca atttcattca ccaccggatg attcagtaaa ccgctacgta
    17401 accggccagc ctgcgccagc gggctatagg ccatcactgg cattcgctgt tgttgacacc
    17461 acggcaataa atcatactca ataccgcgtg acgccagatg atagagcacc tgatttgtcg
    17521 cgcattgctg tcccccaggg atgcgccaca gcgcctgcat atcgtcataa tcaagattag
    17581 agactcccca acggcgaatt tttccctgcg cgattagccg ctccatacct tcaacggtct
    17641 cttcgaatga aaagcctccg gcccagtgca atagatagag atcgagataa tctgttttca
    17701 gacgacgcag gctttcctca caggcggcaa ctatcttctg gccgccagcg ttccacgggt
    17761 acacttttga cactagaaat gcctcatcgc gtcgccctgc taacgcctcg cccacgacct
    17821 tttccgcccc gccgtcggca tacatttccg ccgtatcaat aaggcgtaac cccaaatcca
    17881 gccccgcgcg cagcgccgaa acctcgcgct gacgttgatc cgcgcgctcg cccatatacc
    17941 atgttccctg tccgatggca ggaagcgtca cctgcccgca aaacgttacg tttttcactg
    18001 atttcatttc cttttcaatt tcactcgacg gtaaaacaat acaggactct tagaccctac
    18061 ggtaatgtcc ggcatcatac cgcgcaaggg gggcgatttt cttgtcactg acgaacgtca
    18121 tccgcaatca tgtcgacgat gcgggtaata tgcgcggcgg gtcgctgatt cagtaataat
    18181 tgacgcatca cattcatata gggcgtcaca tgttgaaaga actccagata tcctttacag
    18241 agataatttt gccgttcgcc gccgtccata caaattcgat gtttcggaca accgccgtga
    18301 caggcaaagc gccacgtaca gttctggcag cgtgaagaaa ggtttgcttt agccgcgcca
    18361 aactgctgct gaaaaggaga ggccgccatt tcttctaaag agtgttgctg cagattgccc
    18421 agtttatagg cgggaaaaac aaaatggtca cagctaaaca cgtcgccatt ctgctccacc
    18481 agcaaacttt gcccgcaggt cgactgcatc gtacaaagcg tggcgggctc ccccatccag
    18541 acgccaagta agttatcaaa aagctgtacg aatatgcgtc cgacatcgtg acgtatccat
    18601 tgatcaaaaa catcgcacat aaaggccccc cacccttcag gcgtgacgga aaagggcatc
    18661 agcgaaggcg aatcttcatt gtcagataac gtcaaagaac gctgcgcttt ttgcgcgagc
    18721 ggctcaacaa tgggaataaa ttgtaggtgt ttactttcca gttcctgcgt caaaaaatga
    18781 taaatagcgt tgccatgacg gcatgatgca tcattcacga cagtgagcgt attgaactcg
    18841 acatcatttg cctgcagaag gcggatagca ttaacgactc gggaaaaaga cgcccgccct
    18901 gacggcgttc tccggtaatt atcatgaacg acttgcggcc catcaatcga tataccaatc
    18961 aggaactggt gctgcacaaa gaaagccgcc cactcttcat tgattaatac gccattggtt
    19021 tgcagactgt tgtaaatagt tttgccgttg gcatagcgtt gctgcaagca caccactttt
    19081 tgataaaaag aaagaccgca tagcgtcggc tctcccccct gccaacaaaa cgagacctct
    19141 gatgatggcg tatcatcaat tacccggcgg atatacgtct ccagcacatc gtcagacatg
    19201 acgcgctggc cccggggttt atcaagatag aaacagtact tgcaggataa gttacacaga
    19261 ctgccgctgg gcttggccac ggtattgaat actatgctca ttcgtcttac tcgctgtgaa
    19321 gaatgggtat agcataagcg ggacgtgaca gggcgatatc agccagcatt gcaacaatta
    19381 ttacgctaat tgttagcgca gttgtaatca cctggatttt tcatataaaa ggctagtttt
    19441 ttaaattgat gtaacaaagt ataaatcacg taaggctgcg ccatacccgg tcaacagcgc
    19501 atttatgcaa gccgccatgt tcgcgtttca gacagcacaa agcccgcata acgcaggctt
    19561 tgtcatggtt tttccggcaa attcaatcaa tcagaatcta taggtcacgc cagtagaaag
    19621 gataccggtc caggatttat ccaccatcgg gctgtcggta atttcatccg acaggcgggt
    19681 gtagcgcgca gtaccatata cgctccagtt accggcgaaa ttatagttag cgctcagttc
    19741 aagatacggg ttccagctat cgttcgggtt atagccgcgc aggccgctac gcgaagattc
    19801 tttacgtgat acgccgtaat agtaatcgtt ctggttctcg ctattccatt caaccccgat
    19861 acctggcgtt aaggtcagcc cgccattggt ataccgatac agccaggcca gatcccagac
    19921 aataccgtta ctgttatcta acgtatcccc tgccagtgag gtacgcagga atccatactg
    19981 ggtgtggtgc gcgtaagaaa cgcccgccat catagtactt ttacgcctgt ccagacgacg
    20041 caactgatgg tcatcgctgt cgcccggttt gaagtacatc ggggaccagt atgccatgat
    20101 tgacaactta tcggcattgt cattccacaa gtagtacccg ccgcccagac cacggaacca
    20161 gaagttttcg ctttcataag cgatgaccgg tatcggataa acatcgctat cgtaatcttt
    20221 ataagggtgt tcaaccacac caacgcctgc gcccaacgtc aggttgcttt cagcgtgcgc
    20281 gacgctggcg gatgttgcaa taaacacgcc aagagccaga agtttaagtt tggtcacaat
    20341 ccataattcc ttattcaaat gttctgcggc aaaagtgtaa ccgccaatac ctgtaagccc
    20401 aactatttta cacaatgtaa ccgtttaata tcaccatcac cgattatttt cagatgatcg
    20461 gctgatgatc gttatgtggc cgggaacgct ttttctgata tccaccagcc ttttctacct
    20521 gatgagttat tgatatgtca tcgaaattca ctgacgcgta caggcaagtt ttgcaaatgc
    20581 catctacgct taatgttaag aaggtgtatc accggacacg ttgatcttct gaccaataaa
    20641 atggcatgag agttgctttt tttccttagc agagacggcg ttcagtctac ctcttccggg
    20701 agcctctact attcatatga acggctctta acatgtgcga aaaaacgaaa gaatggcata
    20761 tcatgaatat attcgatcac tatcgccagc gttacgaagc tgccaaggac gaagagttca
    20821 cactgcagga ttttcttacc atttgtcggc aagatcgcag tgcttatgcc aacgcggcag
    20881 agcggctatt aatggctatc ggcgagccta atatggtcga cactgcccag gaaccccgac
    20941 tttcccgact cttctccaac cgggttattg ctcgctatcc tgcgtttgaa gagttttacg
    21001 gcatggaaga cgcgattgaa cagattgtct cttatctgaa acatgcggcg caagggctgg
    21061 aagagaagaa gcaaattctc tatttgctgg gacctgtggg gggtggcaaa tcatcgctcg
    21121 ctgaacggct gaaatcgcta atgcagcgcg tgccaattta tgttttaagc gccaacggcg
    21181 agcgtagtcc ggtcaacgat catccgttat gcctgtttaa tccgcaggaa gacgcgcaga
    21241 ttctggaaaa agagtacggt attccgcgcc gctatctcgg tacgattatg tccccgtggg
    21301 cggccaaaca cctgcatgag tttggcggcg atattactaa attccgcgtg gtgaaagtct
    21361 ggccctccat tctggagcag attgccatcg ccaaaacgga acccggcgat gaaaacaacc
    21421 aggatatttc ggcgctggtc ggcaaggtgg atattcgtaa actcgaacat cacgcccaga
    21481 acgatccgga tgcgtatggt tactctggcg cgctatgccg cgctaaccag gggatcatgg
    21541 agttcgtcga gatgtttaaa gcgcctatta aggtgctgcc ccccttgctg accgcaactc
    21601 aggaaggtaa ctacaatggt acggaaggta tttccgccct gccctttaat ggcatcatac
    21661 ttgcccactc aaacgaatct gaatgggtga ctttccgtaa caataaaaat aacgaagcgt
    21721 tcctcgaccg tgtctatatt gtgaaggtgc cttattgcct gcgaatctcc gaagagatca
    21781 aaatctacga gaaactactt aatcatagcg agctggctca tgcgccctgc gcgccgggca
    21841 cattggaaac gctttcgcgc ttctcgactc tttcccgcct gaaagagccg gaaaattcca
    21901 gtatttactc gaaaatgcgc gtttatgacg gtgaaagcct gaaagatacc gaccccaaag
    21961 ctaaatcgta ccaggagtat cgcgactatg cgggtgtgga cgaagggatg aacggtctct
    22021 ccacccgatt cgcctttaag atcctctccc gcgtattcaa cttcgaccat gcggaagtgg
    22081 cggcaaaccc ggtacatctg ttctacgttc tggaacaaca aatcgagcgc gagcagttcc
    22141 cgcaggagca agctgagcgt tatctggagt tcctgaaagg ctacctgatc ccgaaatacg
    22201 ccgaatttat cggcaaggag atccagacgg cctatctcga atcttactct gagtacgggc
    22261 agaacatttt tgatcgttac gtgacttatg cggatttctg gattcaggat caggagtatc
    22321 gcgacccaga taccggtcaa ctgttcgatc gcgagtcgct gaacgccgaa ctggaaaaaa
    22381 ttgaaaaacc agcgggtatc agtaacccga aagatttccg taatgagata gtaaactttg
    22441 tcctgcgcgc cagagccaac aatagcggcc gtaatccaaa ctggaccagt tacgagaagc
    22501 tgcgcacggt gattgagaaa aaaatgttct ctaatactga agagctgttg ccggtcattt
    22561 cttttaacgc caaaacgtcg actgacgagc agaaaaagca tgacgacttt gtcgatcgga
    22621 tgatggaaaa agggtatacc cgtaagcagg ttcgtttgct gtgcgagtgg tacctgcgcg
    22681 tgcgtaaatc gtcgtgatgt taatgcccgg tggcgcttgc gcttaccggg cctacaaagt
    22741 aatgttctgt agactggcta agcgttagcg ctatccggca ctaacagaac aggcgctcag
    22801 ttggcagtac ggggggcata tgacctggtt catagaccga cgtcttaacg gcaaaaataa
    22861 aagcacggtg aatcgccagc gctttttgcg tcgttataaa gcacaaatta agcagtcgat
    22921 ttccgaagcg attaataaac gctcagtgac cgatgtcgac agcggagagt ccgtctctat
    22981 tccaaccgat gatattagcg aaccgatgtt tcatcagggg cgcggcggtc tgcgccatcg
    23041 cgtccatccg ggtaacgatc actttatcca gaatgatcgc attgagcgtc cgcaaagcgg
    23101 tggcggcggc ggttccggca gcggtcaagg tcaggccagc caggacggcg aaggccagga
    23161 tgagtttgtt tttcagattt caaaagatga gtatctggat ctgctctttg aagatttagc
    23221 gctgcctaat ctgaaaaaaa accagcatcg ccagcttaac gagtataaaa ctcaccgcgc
    23281 cggtttcacc tcaaacggcg tgccggccaa tatcagcgtg gtacgttcgc tacaaaactc
    23341 tctggcgcgc cgtacagcaa tgacggcagg aaaacgccgc gaactgcacg cgctggaaac
    23401 ggaactggag accatcagcc acagcgaacc agcgcaactg cttgaagagg agcggttacg
    23461 tcgggagatt gccgaactac gggctaaaat cgagcgagtg ccgtttatcg acacttttga
    23521 tttacgctat aaaaattatg aaaaacgacc tgagccctcc agccaggcgg tgatgttctg
    23581 tctgatggac gtctcgggtt cgatggacca ggcaaccaaa gatatggcca agcgttttta
    23641 cattctgctt tatctgtttt tgagccgaac gtataagaac gtagaagtgg tttatatccg
    23701 ccaccatacc caggcgaagg aagtggatga acatgagttc ttttattcgc aagagaccgg
    23761 ggggacgatt gtctccagcg cgcttaaact catggacgaa gtagttaaag agcgctacga
    23821 ccccagtcag tggaacatct atgcggcgca agcgtcagac ggtgataact gggccgacga
    23881 ttcaccgctg tgtcatgaga ttctggcgaa aaagctgctg ccggtagtgc gctattacag
    23941 ctatatcgag attacccgcc gcgcccacca gaccttatgg cgcgagtatg aacatctgca
    24001 ggcgacgttc gataacttcg ccatgcagca tattcgcgat caggaggata tttatccggt
    24061 attccgcgaa ttgtttcaga aacagagcgc caatcaaagt gcataaccct aaatcagccc
    24121 gtaatgcgtc acgggctgat ttatcactaa caaggcgatt atacatattg ccactacaat
    24181 agccgtaaac ctgtatatct cctgactgga tttaccttac atgcgccgac ttatcactgg
    24241 aatagtatgg atttattaat gccagcaata ctcaccagga ggtggcggta attgcagaga
    24301 atcagggggt tgtagtttgc aaaaaaagta gtgaccagga aaatagatat caaaatccca
    24361 cgggccacca ccactgcccg acgatgccat agccgacgac gtgaacccca cggccagcaa
    24421 tgcaaaaagc aaaattgctg ctatttcttt aaatcgtttc atagtacctc cgaacggaag
    24481 tacattatta tccttaccac gtcacactcc tttcacgtaa taataaaggc tattttattt
    24541 tcgttagtgt taaatcgatg ccgttaatta acaatttact ttttgcgaca atagtcacga
    24601 ctgaaaatat caacaccata tattattgaa tttattaaat cgagaatgat ttttattcca
    24661 taacatcaac acgttttatt tttaaacagt ctgttagagg aattctcatc gctatggtaa
    24721 actaacgcat ccgactttca gggctgtagt tcatcatgaa tttgcatcat aaagcgctca
    24781 ggcactttat ctcggcaagc gtcatcgttt tgacatcgtc cttcctgatt tacgaactta
    24841 ttgccagcga cagggcaatg aatgcctata tgcgttatat catggagaga gccgattcgt
    24901 cgtttttgta cgataagtac cagaattaaa gcatcgccgc acatttgatg cgaacttttg
    24961 aagcgccggg agaccccgtc accgcagaaa aacgccgcgc gttttgcgac gcctttgagg
    25021 ccattaacgg tacgcacggc gtcaacctga cccggcataa ttatccggcg ctacatggca
    25081 ccctgcaaac cgtcgctaca cagtgtaccg ataatcttga tgacgccctt ttactgcctg
    25141 catttgatca ggcggtaagc atcaaccgag cgcaggacga ccacagtcac gggctgggca
    25201 cactggagct taaattccgt tattacgttg atttaaataa acattatgtc tatttctatg
    25261 atttaatcaa ctcacggcgc ttcgccatgc atcgttggac ttttttacaa aaaggcacaa
    25321 tgggtattaa cagaaaagat atagataaac tttttaccgg ccgtacggtt atttcaagta
    25381 tctacatgga tgatattacc caggaaaacg tcatgagctt tttaacgcca gtctatctgt
    25441 cgggatcgtt aaaaggcatc gtgatggtgg atgttaacca ggataattta aaaaatattt
    25501 tttataccca ggaccgtccg ctggtttggc gttatcttaa cgtaacacta aaggatctgg
    25561 attccggaaa agaaattatt attaataaaa gcaaaaataa tctgtttcaa tatgtgaatt
    25621 ataaccatga tatccctggt ggactgcgcg tttcgttgtc gcttgattta acctatttcc
    25681 ttgtctcgtc ctggaaagcg ctggcctttt acttactggc aacagcgctc ctgcttaata
    25741 tggtacggat gcactttcgg ctttatcgca acgtcacacg cgaaaatatt agcgatgcca
    25801 tgaccgggct ttacaaccgt aaaatattaa caccggtgct ggaacagcga ctgcaacgcc
    25861 tggtcaatac cgggacgccg gtgacatttg tcgctattga ttgcgacagg ttaaaactga
    25921 tcaacgatac cctggggcac caggaaggcg accgaattat aaccctgttg gcgaaagcga
    25981 ttaaaacatc gattcgtaaa agcgattacg ccattcgcct cggcggcgat gaattctgta
    26041 ttattcttgt tgattacgcg gcggatttgg ctatccatct gccggagcgt attattcgta
    26101 acctgcagat tatcgcaccg gataagacag tccatttttc cgccgggatt tataatatgc
    26161 agcccaatga tacgattaat gatgcctacc aggcttccga tgcgcagctc tatctgaaca
    26221 aacaacaaaa acaacatcgt tcatcatagt gcttcgcagt aaatgttcat attgtaccag
    26281 gaggaagaaa tggccgaaat ggctgaagtc gcgaagggtg tcgctacaca ccaacgttta
    26341 gtggctttat taacccagga gaacgcgcgc tatcgtgtgg tgagccatga agcagtagga
    26401 aaatgcgaag cggtatctga aatacgcggt actgcgctgg gccagggcgc aaaagcgctg
    26461 gtctgtaaag tcaaaggcaa cggcgtcaac cagcacgttc ttgctattct ggcggccgat
    26521 cagcaagccg acctctctca gcttgcttca catctgggcg gcttacgcgc ttcccttgcc
    26581 agcccggcgg aagtcgatat gttgaccggc tgcgtttttg gcgcgatccc gcctttcagt
    26641 tttcacccca atctgaaact ggtcgccgat ccgctcctgt ttgagcgttt cgatgaaatt
    26701 gcctttaatg ccggtctgct ggaaaaatca gtcattatga atacacagga ctatctgcgc
    26761 atcgcccgac cagaactggc agtcttccgc cgctttcagt catcgccaac ggcttagtcc
    26821 ccttcaagga gcaatacaga cacaacaata atgataaaaa tggcgaaaaa cgacgctgtt
    26881 atcatcagcg cttcaagaaa cggtggatcg tacataattg tatcctcagg aagacaacaa
    26941 tgacggttca ccggttagca atacgcggcg ttgatgtcaa tttaatgaca acgccgtttt
    27001 tcacgtagaa attgtctttc aggcagttgc ctgaaatccg catcaatcgt taaaaaggcc
    27061 tgtgcgcttt gccgtttggg cgtaaagtag tcaggcttac tttttggcaa ggaaaccata
    27121 atgtttgatg tcactctgct gatcctgctc ggactggcag ctctgggatt tattagtcac
    27181 aacaccactg tcgccgtctc aattctggtg ctgattattg tccgcgtaac cccgttgaat
    27241 accttttttc cctggattga aaaacagggg ctcaccgtcg ggattatcat tctgaccatc
    27301 ggcgtgatgg cccccatcgc cagcggaacc ctaccgccct ccacattgat ccactctttt
    27361 gtgaactgga aatcgctggt cgcgattgcc gtcggcgttt tcgtctcctg gctgggtggt
    27421 cgcggcatta cgctgatggg aaaccaaccg cagctcgtcg
//
LOCUS       DAGWFR010000041        26939 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.042, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000041 DAGWFR010000000
VERSION     DAGWFR010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 26939)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26939)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26939
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.042"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..1509
                     /gene="acnA"
                     /locus_tag="MOX77_001790"
     CDS             <1..1509
                     /gene="acnA"
                     /locus_tag="MOX77_001790"
                     /EC_number="4.2.1.3"
                     /EC_number="4.2.1.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase AcnA"
                     /protein_id="HCA3357337.1"
                     /translation="PKAFAASAELELNTAQRDRQPVDYTMNGQPYQLPDGAVVIAAIT
                     SCTNTSNPSVLMAAGLLAKKAVTLGLKRQPWVKASLAPGSKVVSDYLAQAKLTPYLDE
                     LGFNLVGYGCTTCIGNSGPLPEPIETAIKKGDLTVGAVLSGNRNFEGRIHPLVKTNWL
                     VSPPLVVAYALAGNMNINLATDPLGYDRKGDPVYLKDIWPSAQEIARAVELVSSDMFR
                     KEYAEVFEGTEEWKSIQVESSDTYGWQSDSTYIRLSPFFDEMQAQPAPVKDIHGARIL
                     AMLGDSVTTDHISPAGSIKPDSPAGRYLQNHGVERKDFNSYGSRRGNHEVMMRGTFAN
                     IRIRNEMLPGVEGGMTRHLPGTEAMSIYDAAMLYQQEKTPLAVIAGKEYGSGSSRDWA
                     AKGPRLLGIRVVIAESFERIHRSSLIGMGILPLEFPQGVTRKTLGLTGEEVIDIADLQ
                     NLRPGATIPVMLTRADGSKETVPCRCRIDTATELTYYQNDGILHYVIRNMLN"
     gene            complement(1565..2155)
                     /gene="ribA"
                     /locus_tag="MOX77_001791"
     CDS             complement(1565..2155)
                     /gene="ribA"
                     /locus_tag="MOX77_001791"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HCA3357338.1"
                     /translation="MQLKRVAEAKLPTPLGDFLMVGFEELATGHDHAALVFGDISGKT
                     PVLARVHSECLTGDALFSLRCDCGFQLEAALTHIAEEGRGILIYHRQEGRNIGLLNKI
                     RAYALQDQGYDTVEANHQLGFAADERDFTLCADMFKLLGVDEVRLLTNNPKKVEILTE
                     AGINIVERVPLIVGRNPNNEHYLDTKAAKMGHLLSK"
     gene            2351..3115
                     /gene="pgpB"
                     /locus_tag="MOX77_001792"
     CDS             2351..3115
                     /gene="pgpB"
                     /locus_tag="MOX77_001792"
                     /EC_number="3.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase B"
                     /protein_id="HCA3357339.1"
                     /translation="MLSIARRTAAGAALLLIMPLAVWVSGWQWQPGHQVWWLKTLFWI
                     TETVTKPWGVITHVILCGWFLWCLRFRLRAAIMLFAILGGAIIVGQGVKSWVKERVQE
                     PRPFVVWLEKTHHIPVDEFYTLKRTERGHLVKEQLAGQQNIPVFLRQHWQKETGFAFP
                     SGHTMFAASWALLAVGLLWPRRRTFTIAFLLVWATGVMGSRLLLGMHWPRDLVVATLI
                     SWLLVTLATWLAQRICGPLMPPREEAQEIAEREQES"
     gene            3265..3573
                     /locus_tag="MOX77_001793"
     CDS             3265..3573
                     /locus_tag="MOX77_001793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LapA family protein"
                     /protein_id="HCA3357340.1"
                     /translation="MKYLLIFLLVLAIFVISVTLGAQNDQQVTFNYLLAQGEYRISTL
                     LAVLFAVGFAIGWLICGLFWLRIRVSLARAERKIKRLENKLSPATDVAVPADSSVVKE
                     "
     gene            3580..4749
                     /gene="lapB"
                     /locus_tag="MOX77_001794"
     CDS             3580..4749
                     /gene="lapB"
                     /locus_tag="MOX77_001794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000891373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly protein LapB"
                     /protein_id="HCA3357341.1"
                     /translation="MLELLFLLLPVAAAYGWYMGRRSAQQTKQDEANRLSRDYVAGVN
                     FLLSNQQDKAVDLFLDMLKEDTGTVEAHLTLGNLFRSRGEVDRAIRIHQTLMESASLT
                     YEQRLLAVQQLGRDYMAAGLYDRAEDMFNQLTDETEFRVGALQQLLQIYQLTSDWQKA
                     IEVAERLVKLGKDKQRIEIAHFYCELALQQMGNDDMDRAMALLKKGAAADKNSARVSI
                     MMGRVYMARGDYAKAVESLQRVIVQDKELVSETLEMLQTCYQQLGKNAEWAEFLRRAV
                     EENTGAGAELMLADILEAREGSDAAQVYITRQLQRHPTMRVFHKLMDYHLNEAEEGRA
                     KESLMVLRDMVGEQVRSKPRYRCQKCGFTAYTLYWHCPSCRAWSTIKPIRGLDGQ"
     gene            4940..5677
                     /gene="pyrF"
                     /locus_tag="MOX77_001795"
     CDS             4940..5677
                     /gene="pyrF"
                     /locus_tag="MOX77_001795"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HCA3357342.1"
                     /translation="MTFTASSSSCAITESPVVVALDYHERDKALAFVDKIDPRDCRLK
                     VGKEMFTLFGPQLVRDLQQRGFDVFLDLKFHDIPNTTARAVAAAADLGVWMVNVHASG
                     GARMMAAARDALAPFSKDAPLLIAVTVLTSMGTSDLHDLGVTLSPAEHAERLARLTQQ
                     CGLDGVVCSAQEAVRFKQAFGAAFKLVTPGIRSAGSEAGDQRRIMTPEQALSAGVDYM
                     VIGRPVTQSVDPAQTLKDINASLKREA"
     gene            5677..6003
                     /gene="yciH"
                     /locus_tag="MOX77_001796"
     CDS             5677..6003
                     /gene="yciH"
                     /locus_tag="MOX77_001796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response translation initiation inhibitor
                     YciH"
                     /protein_id="HCA3357343.1"
                     /translation="MSDSNSRLVYSTQTGRIEEPKTAPVRPKGDGIVRIQRQTSGRKG
                     KGVCLITGIEMNDAELTKLAAELKKKCGCGGAVKEGIIEIQGDKRDLIKSLLEAKGMK
                     VKLAGG"
     gene            complement(6123..6341)
                     /gene="osmB"
                     /locus_tag="MOX77_001797"
     CDS             complement(6123..6341)
                     /gene="osmB"
                     /locus_tag="MOX77_001797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmotically-inducible lipoprotein OsmB"
                     /protein_id="HCA3357344.1"
                     /translation="MFMMSKKMAAAVLAITVAMSLSACSNWSKRDRNTAIGAGAGALG
                     GAVLTDGSTLGTLGGAAVGGVIGHQVGK"
     gene            complement(6602..7354)
                     /locus_tag="MOX77_001798"
     CDS             complement(6602..7354)
                     /locus_tag="MOX77_001798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HCA3357345.1"
                     /translation="MNSRQQSILQMVVDKGQMSVAELAKITGVSEVTIRQDLNTLEKQ
                     SYLRRAHGFAVSLESDDVETRMMTNYTLKRRLAEFAASLVSPGESVFIENGSSNALLA
                     RTLAEQKDVTIITVSSYIAHLLKETPCEVILLGGIYQKKSESMVGPLTRQFIHQVHFS
                     KAFIGIDGWQADTGFTGRDMMRSDVVNAVLEKGSEAIVLTDSSKFGCVHPYPLGPLSR
                     FHRVITDSKISASDQMQLEHAGLLVNVIGSSV"
     gene            complement(7441..7620)
                     /locus_tag="MOX77_001799"
     CDS             complement(7441..7620)
                     /locus_tag="MOX77_001799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001279854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357346.1"
                     /translation="MSDIEAQRIAARIDTVLDILVAGDYHSAINNLEILRAELLDQVK
                     DGISPSQAPGSPWEI"
     gene            complement(7742..9724)
                     /gene="pdeR"
                     /locus_tag="MOX77_001800"
     CDS             complement(7742..9724)
                     /gene="pdeR"
                     /locus_tag="MOX77_001800"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic di-GMP phosphodiesterase"
                     /protein_id="HCA3357347.1"
                     /translation="MMKQIQEQTALNPLHSHWRLADDRNVLYLSPTGETDAEKTVELS
                     PEQAGRIREITAITSSLLITLLIEKQVTAVHLVGRKINNREWAGSLATWPDTPAVAPT
                     QAQELSFAEQIVSEANSVIAILDSRGKICRFNRLCEEYTGLKERDVIGQSVFKLFMSR
                     REAVASRHYIENFFRNGNAYEIERWIKTRKGQRLFLFRNKFVHNGSGKNEIFLICAGT
                     DITEERRAQERLRILANTDTVTGLPNRNAIHEFINHAIASAGESQVGIVYLDLDNFKK
                     INDAYGHMFGDQLLQAVSLALLSCLEEDQLLARLGGDEFIVLVAHTSQAALEAVASRI
                     LTRLRQPFRIGLIEVYTGCAIGISLAPRHGQDSESLIRTADTAMYNAKEGGRGQFCVF
                     SPEMNQRVFDYHWLDTNLRKALENDQLLIHYQPKITWRGEVRSLEALVRWQSPERGLI
                     PPLEFISYAEESGLIVPLGRWVILDVVRQIAKWRDKGINLRVAVNFSARQLADQTLFT
                     ALKQALYDLNFEYCPIDVELTESCLIENDTLALSVIQQFSQLGAQIHLDDFGTGYSSL
                     SQLARFPIDAVKLDQAFVRDIHKQPLSQSLVRAIVAVAQALNLQVIAEGVENAKEDAF
                     LTKNGVNERQGFLFAKPMPAVSFERWYKRYQTKKMR"
     gene            complement(9986..11920)
                     /locus_tag="MOX77_001801"
     CDS             complement(9986..11920)
                     /locus_tag="MOX77_001801"
                     /EC_number="3.1.13.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exoribonuclease II"
                     /protein_id="HCA3357348.1"
                     /translation="MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSY
                     FIPPPQMKKVMHGDRIVAVIHTEKERESAEPEELIEPFLTRFVGKVQGKNDRLSIVPD
                     HPLLKDAIPCRAARGVQHEFKEGDWAVAEMRRHPLKGDRSFYADLTQYITFADDHFVP
                     WWVTLARHNLEKEAPNGVATEMLDEGLERQDLTALNFVTIDSASTEDMDDALYAEELA
                     DGRLQLTVAIADPTAWIAEGSKLDNAAKIRAFTNYLPGFNIPMLPRELSDDLCSLRAN
                     EVRPALACRMIIAADGTIDDDIAFFAATIESKAKLVYDNVSDWLENNSTWQPENEGIA
                     QQIRLLHRICLSRSEWRHHHALVFKDRPDYRFVLGEKGEVLDIVAEPRRIANRIVEES
                     MIAANLCAARVLRDKLGFGIYNVHTGFDPANADALAALLKTHGLHVDAEEVLTLEGFC
                     KLRRELDAQPSGFLDSRIRRFQSFAEISTEPGPHFGLGLEAYATWTSPIRKYGDMINH
                     RLLKAVIKGEAIARPQEDITQQMAERRRLNRMAERDVGDWLYARFLNDKAGTNTRFAA
                     EIIDVSRGGMRVRLVDNGAIAFIPAPFLHAVRDELVCSQENGTVQIKGETVYKVTDVI
                     DVTIAEVRMETRSIIARPAA"
     gene            complement(12222..13142)
                     /locus_tag="MOX77_001802"
     CDS             complement(12222..13142)
                     /locus_tag="MOX77_001802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HCA3357349.1"
                     /translation="MEQCRKAGKSHWYHETQSTMSSQTPLSLMPEAAYVNDRFLLDLA
                     VAETALTPFESWLKPARQLADVLFPRTVLNDRLHTFSAYERMSTALTAAQVFGVQRLC
                     RHYAARLAPLPGPDASRESNQRLAQITQYARQLAGSPSVINTRAREQLAEVGLTARDT
                     VLINQIIGFIGFQARVAAIFQAFCRLPVRELPGQEMQRFARAARFQNPQTTWRPAASL
                     VEYPLAHTKVRRQYSSSQCQIMAPVLMRDPSSFALLERILTSTLHTASPPSLLPLITL
                     LTSRINGSAACFNEQATQPGAWRRAVITLR"
     gene            complement(13342..14130)
                     /gene="fabI"
                     /locus_tag="MOX77_001803"
     CDS             complement(13342..14130)
                     /gene="fabI"
                     /locus_tag="MOX77_001803"
                     /EC_number="1.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HCA3357350.1"
                     /translation="MGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKL
                     KGRVEEFAAQLGSSIVLPCDVAEDASIDAMFAELGNVWPKFDGFVHSIGFAPGDQLDG
                     DYVNAVTREGFKIAHDISSYSFVAMAKACRTMLNPGSALLTLSYLGAERAIPNYNVMG
                     LAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRR
                     TVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIAAMNELELK"
     gene            complement(14248..14547)
                     /locus_tag="MOX77_001804"
     CDS             complement(14248..14547)
                     /locus_tag="MOX77_001804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357351.1"
                     /translation="MSITSLIGEVNHLDEYSGFLQNLYLSGGRRIAIVLAVRPGVSGW
                     MRRTLHQLVYCTVGPVPLDSLICQFGPGECSKSSGTSLPCGFRTSPAGDSGGKIA"
     gene            complement(14522..14701)
                     /locus_tag="MOX77_001805"
     CDS             complement(14522..14701)
                     /locus_tag="MOX77_001805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357352.1"
                     /translation="MQTYKNLICNYCNHLLSKIFHIQYYSASINRENLQRLKKKLFLL
                     SICWLKLHVHNIANR"
     gene            14736..16118
                     /locus_tag="MOX77_001806"
     CDS             14736..16118
                     /locus_tag="MOX77_001806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Secreted effector kinase SteC"
                     /protein_id="HCA3357353.1"
                     /translation="MPFTFQIGNHSCQISERHLRDIIDHKREHVFSTYEKFIDFFRNI
                     FTSRSLISDYREIYNLLCQKNERPDITKPFSLRPFSKRDEDCTRWRPLLGYIKLIDAS
                     RPETRDKYTVEVLAHQENMLLLQMFYDGMLVTETECSERCVDFLKETMFNYNSGEITL
                     AALDNDHLTPSEAGSNGIYEAFEHRLIDFLTTPATPATASGDESGAIDQTDTSQPAAI
                     EAFINSPEFQKNIRMRDIEKNKIGSGSYGTVYRLHDDFVVKIPINERGIKVDVNSPEH
                     RNCHPDRVSKYLNMANDDKNFSRSASMNINGKDVTVLVSKYIQGQEFDIEDEDNYRMA
                     EALLESRGVYMHDIDNVGNILIKEGVLFFVDGDQIVLSQESRQQRSVSLATRQLEEQI
                     KARYLVKLKQSETEGNTEDIEYYKSLITELDELIGEEEQAPAPGRRFKLAAPEEGTLV
                     AKVLKDELKK"
     gene            16585..17292
                     /locus_tag="MOX77_001807"
     CDS             16585..17292
                     /locus_tag="MOX77_001807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001748430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HCA3357354.1"
                     /translation="MRYFFMAEPIRAMEGDLLGVEITTHFASSPARPLHPEFVISSWD
                     NSQKRRFLLDLLRTIAAKHGWFLRHGLFCIVNIDRGMAQLVLQDKDIRALLHAMLFVE
                     LQVAEHFSCQDNALIDPLIHALHKQPNPLWLGDLGVGNATAAPLVCGCFSGVKLDRSF
                     FISQIEKMTFPLLVKHIRRYCDKIVVGGQENTRYLPALKTAGIWATQGTLFPSVALEE
                     VETLLLGRRVNTLRESN"
     gene            complement(17308..18114)
                     /gene="sapF"
                     /locus_tag="MOX77_001808"
     CDS             complement(17308..18114)
                     /gene="sapF"
                     /locus_tag="MOX77_001808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter ATP-binding protein
                     SapF"
                     /protein_id="HCA3357355.1"
                     /translation="MVETLLEVRNLSKTFRYRTGWFRRQTVDAVKPLSFTLRERQTLA
                     IIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHYGDYSFRSQRIRMIFQDPSTSLN
                     PRQRISQILDFPLRLNTVLEPEQRRKQIVETMRMVGLLPDHVSYYPHMLAPGQKQRLG
                     LARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHIGMMKHIS
                     DQVLVMHQGVVVERGSTADVLASPLHELTRRLIAGHFGEALTADAWRKDR"
     gene            complement(18116..19108)
                     /gene="sapD"
                     /locus_tag="MOX77_001809"
     CDS             complement(18116..19108)
                     /gene="sapD"
                     /locus_tag="MOX77_001809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter ATP-binding protein
                     SapD"
                     /protein_id="HCA3357356.1"
                     /translation="MPLLDIRNLTIEFKTSEGWVKAVDRVSMTLSEGEIRGLVGESGS
                     GKSLIAKAICGVAKDNWRVTADRMRFDDIDLLRLSSRERRKLVGHNVSMIFQEPQSCL
                     DPSERVGRQLMQNIPAWTYKGRWWQRLGWRKRRAIELLHRVGIKDHKDAMRSFPYELT
                     DGECQKVMIAIALANQPRLLIADEPTNSMEPTTQAQIFRLLTRLNQNSNTTILLISHD
                     LQMLSQWADKINVLYCGQTVETAPSKDLVTTPHHPYTQALIRAIPDFGSAMPHKSRLN
                     TLPGAIPLLEQLPIGCRLGPRCPYAQRECIITPRLTGAKNHLYACHFPLNMERE"
     gene            complement(19108..19998)
                     /gene="sapC"
                     /locus_tag="MOX77_001810"
     CDS             complement(19108..19998)
                     /gene="sapC"
                     /locus_tag="MOX77_001810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter permease SapC"
                     /protein_id="HCA3357357.1"
                     /translation="MPYDSVYSEKRPPGTLRTAWRKFYSDAPAMVGLYGCAGLALLCI
                     FGGWIAPYGIDQQFLGYQLLPPSWSRYGEVSFFLGTDDLGRDVLSRLLSGAAPTVGGA
                     FIVTLAATLCGLVLGVVAGATHGLRSAVLNHILDTLLSIPSLLLAIIVVAFAGPHLSH
                     AMFAVWLALLPRMVRSVYSMVHDELEKEYVIAARLDGATTLNILWFAILPNITAGLVT
                     EITRALSMAILDIAALGFLDLGAQLPSPEWGAMLGDALELIYVAPWTVMLPGAAITLS
                     VLLVNLLGDGIRRAIIAGVE"
     gene            20133..20534
                     /locus_tag="MOX77_001811"
     CDS             20133..20534
                     /locus_tag="MOX77_001811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001543117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4102 domain-containing protein"
                     /protein_id="HCA3357358.1"
                     /translation="MYTQMCISSYGVYTLLADTKLRKAPGKKRDQIKVISDAHGLNVR
                     LSTSGSITFFYRYRWNGNAAQLTIGDYPTISLSHARERRQYFRSWLTEGLDPRRQMVL
                     EKKKKTEALTVKEHTTTGRSFSTVRNLGQGH"
     gene            complement(20847..21299)
                     /locus_tag="MOX77_001812"
                     /pseudo
     CDS             complement(20847..21299)
                     /locus_tag="MOX77_001812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000802709.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            21638..21907
                     /locus_tag="MOX77_001813"
     CDS             21638..21907
                     /locus_tag="MOX77_001813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001766201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein NinG"
                     /protein_id="HCA3357359.1"
                     /translation="MAKLPRRKCKVCREWFPPAYSNVVWCCPEHGAIYALELRAKEKS
                     KAAARCIRGKHQADKAERQANGCMLRERQAVLYTLSRKMFRKHLR"
     gene            22262..22402
                     /locus_tag="MOX77_001814"
     CDS             22262..22402
                     /locus_tag="MOX77_001814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001605117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pertussis toxin subunit"
                     /protein_id="HCA3357360.1"
                     /translation="MIFRDGFASHGNNRNLQQHIRDDSCVSGSRDSTILRLSQILMRL
                     II"
     gene            22441..22740
                     /locus_tag="MOX77_001815"
     CDS             22441..22740
                     /locus_tag="MOX77_001815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001640522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pertussis toxin subunit"
                     /protein_id="HCA3357361.1"
                     /translation="MYRYRIRADNSFYSLPPSVAYIELCGIQFGHFERVMMRLQSEYV
                     SVNSIPIENIHEAVELVYDRNTSMVNIVGVDYEKEIKGSDSCSCVNIQCLLCSYG"
     gene            22667..23092
                     /locus_tag="MOX77_001816"
     CDS             22667..23092
                     /locus_tag="MOX77_001816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000727929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="subtilase cytotoxin subunit B-like protein"
                     /protein_id="HCA3357362.1"
                     /translation="MKKKLKVLTLALASISSVCYAAMADYDTYVSNVQINNLSYGVYT
                     SGGKETQFFCIGLKHGSEAISINAMCKVDVYGNHKQGFDNMLNTAKYYYTTGGDVRIY
                     YKENVWRDPDFKSAFSSRELIAITTCSSSSYCMGPTVTN"
     gene            23471..23907
                     /locus_tag="MOX77_001817"
                     /pseudo
     CDS             23471..23907
                     /locus_tag="MOX77_001817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308311.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
     gene            complement(24057..25022)
                     /gene="sapB"
                     /locus_tag="MOX77_001818"
     CDS             complement(24057..25022)
                     /gene="sapB"
                     /locus_tag="MOX77_001818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter permease SapB"
                     /protein_id="HCA3357363.1"
                     /translation="MIIFTLRRLLLLLVTLFFLTFIGFSLSYFTPHAPLQGASLWNAW
                     VFWFNGLLHWDFGVSSINGQLISEQLKEVFPATMELCILAFGFALMVGIPVGMLAGVT
                     RSKWPDRFISALALLGFSIPVFWLALLLTLFFSLTLGWLPVSGRFDLLYEVKPVTGFA
                     IIDAWISDSPWRDEMVMSAIRHMVLPVLTLSVAPTTEVIRLMRISTIEVYDQNYVKAA
                     ATRGLSRFTILRRHVLHNALPPVIPRLGLQFSTMLTLAMITEMVFSWPGLGRWLIHAI
                     RQQDYAAISAGVMVIGSLVIVVNVISDILGAMANPLKHKEWYALR"
     gene            complement(25019..26668)
                     /gene="sapA"
                     /locus_tag="MOX77_001819"
     CDS             complement(25019..26668)
                     /gene="sapA"
                     /locus_tag="MOX77_001819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein SapA"
                     /protein_id="HCA3357364.1"
                     /translation="MRLVLSSLIVIAGLLSSQATAATAPEQTASADIRDSGFVYCVSG
                     QVNTFNPQKASSGLIVDTLAAQLYDRLLDVDPYTYRLVPELAESWEVLDNGATYHFHL
                     RRDVSFQKTAWFTPTRKLNADDVVFTFQRIFDRRHPWHNINGSSFPYFDSLQFADNVK
                     SVRKLDNNTVEFRLTQPDASFLWHLATHYASVMSAEYAAQLSRKDRQELLDRQPVGTG
                     PFQLSEYRAGQFIRLQRHDGFWRGKPLMPQVVVDLGSGGIGRLSKLLTGECDVLAWPA
                     ASQLTILRDDPRLRLTLRPGMNIAYLAFNTDKPPLNNPAVRHALALSINNQRLMQSIY
                     YGTAETAASILPRASWAYDNDAKITEYNPQKSREQLKALGIENLTLHLWVPTSSQAWN
                     PSPLKTAELIQADMAQVGVKVVIVPVEGRFQEARLMDMNHDLTLSGWATDSNDPDSFF
                     RPLLSCAAINSQTNFAHWCNPEFDSVLRKALSSQQLASRIEAYDEAQNILEKELPILP
                     LASSLRLQAYRYDIKGLVLSPFGNASFAGVSREKHEEVKKP"
     gene            complement(26780..>26939)
                     /gene="pspF"
                     /locus_tag="MOX77_001820"
     CDS             complement(26780..>26939)
                     /gene="pspF"
                     /locus_tag="MOX77_001820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460649.1"
                     /note="transcriptional activator for pspABCE which are
                     induced in response to phage proteins, membrane altering
                     stresses, and impaired proton expor; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phage shock protein operon transcriptional
                     activator"
                     /protein_id="HCA3357365.1"
                     /translation="DLPLNLREFQLQQEKALLQRSLQQAKFNQKRAADLLALTYHQFR
                     ALLKKHQL"
BASE COUNT         6794 a         6443 c         7019 g         6683 t
ORIGIN      
        1 ccgaaagcct ttgccgccag cgccgagctg gagctgaata ccgcgcaaag agatcgccag
       61 ccggttgact atacgatgaa cggacagcca tatcagcttc cggatggcgc tgtcgtcatt
      121 gccgccatca cctcctgtac gaatacctcg aatcccagcg tgctgatggc ggcgggatta
      181 ctggcgaaaa aggcagtaac gctggggttg aagcgtcaac cgtgggtcaa ggcttctctg
      241 gcgccggggt caaaagtggt atctgactat ctggcgcagg ccaaacttac gccttatctg
      301 gatgagctcg gttttaacct ggtcggctat ggctgtacga cctgtatcgg gaactccggt
      361 ccgttgccgg agcctattga gaccgcgatt aaaaaaggcg atctgacggt aggggccgtg
      421 ctttccggta accgaaattt tgaagggcgt atccatccgc tggtgaaaac gaactggctg
      481 gtgtcgccgc cgctggtggt cgcgtatgcg ctggccggaa acatgaatat taacctcgcg
      541 acagacccgc tggggtacga tcgtaaaggc gatccggtat acctgaagga tatctggcct
      601 tcggcgcagg aaattgcccg cgccgttgaa ctggtatcat cggatatgtt ccgtaaagag
      661 tatgcggaag tgtttgaggg cacggaagaa tggaaatcga ttcaggttga atcgtccgat
      721 acctacggct ggcagtcgga ttcaacctat atccgcctgt cgcctttctt tgatgaaatg
      781 caggcccagc ctgcacccgt caaagatatc cacggcgcgc gtatcctggc gatgctgggc
      841 gattcggtga cgaccgacca tatttccccg gccggcagta tcaagccgga cagtcccgcc
      901 ggacgctatc tgcaaaacca cggcgttgag cggaaggatt ttaactccta tggatcacgg
      961 cgcggcaacc atgaagtgat gatgcgcggt acgttcgcca atattcgtat tcgcaacgaa
     1021 atgctgcccg gcgtcgaagg tgggatgacg cggcatttgc cgggtacgga agcgatgtcg
     1081 atttatgatg ccgcgatgct ctaccagcag gaaaaaacgc cgctggcggt aattgccggg
     1141 aaagagtatg ggtcgggatc gagccgtgac tgggcggcaa aaggtccgcg gctgttaggt
     1201 attcgcgtgg tgatcgccga gtcgttcgaa cgtatccatc gctcaagcct gattgggatg
     1261 gggatcctgc cgctggagtt tccacagggc gtaacgcgta aaacgctggg actgaccggg
     1321 gaagaggtga ttgatatcgc ggatctgcaa aatctgcgcc ctggcgcgac cattccggtt
     1381 atgttaacga gagcggacgg cagcaaagaa acggtgcctt gtcgctgtcg cattgatacc
     1441 gccaccgagc tgacttacta ccagaatgac ggcatattgc actatgtcat tagaaatatg
     1501 ctgaactaaa gccgtttatc gggcctgccg taaacaggca ggcccgcgct ttaataccgg
     1561 tggcttactt gcttagcagg tggcccattt tggccgcttt agtatcgaga taatgctcat
     1621 tatttggatt acgacccaca atgagcggaa cgcgttccac gatattaatt cccgcctcgg
     1681 tcagtatttc gactttcttc ggattattgg tcagtaggcg aacttcatcc acgccgagta
     1741 atttgaacat atccgcgcac agggtgaaat cacgctcatc ggcggcaaag ccgagctgat
     1801 gattggcctc caccgtgtca tagccttgat cctgtaacgc ataagcgcga attttattaa
     1861 gcaggccgat attgcggcct tcctgacggt ggtaaatcag aataccgcgt ccttcttccg
     1921 caatatgcgt cagcgcggct tccagttgaa aaccacaatc acagcgcaga ctaaaaagcg
     1981 cgtccccggt aagacattcg gaatgaacgc gagccagtac tggcgtttta cctgaaatat
     2041 cgccaaaaac cagcgcggca tggtcgtgtc cggttgccag ttcttcaaat cccaccatca
     2101 gaaagtcacc caatggggtt ggcagtttgg cttctgccac acgtttaagc tgcatgtatt
     2161 tctccagatt atgctgacgc ctgcggtgtc gtcgcctgtt ggcctgtatc ccgctatttt
     2221 gccataaggc ggcggtcatc acctaatcac taccacgtaa ttgctcagga atggcacaaa
     2281 tttgtcaatt ttccagtccg gcgagaattt tcagttatga ttgtgatact tacttataaa
     2341 aggagcatcc atgctttcaa ttgcgaggcg caccgcggca ggcgccgccc tgttgcttat
     2401 catgccgctt gccgtatggg tatcaggctg gcagtggcag ccaggacatc aggtctggtg
     2461 gctaaaaacg ctattctgga taacggaaac cgtgaccaaa ccctggggcg ttatcacgca
     2521 tgtgattctt tgtggatggt tcttatggtg cctgcgattt cgcctgcgcg ccgccattat
     2581 gctgtttgcg attctcggtg gggcgattat cgtcgggcag ggcgtgaagt catgggtaaa
     2641 ggagcgcgta caggagccgc ggccatttgt ggtctggctt gaaaaaacgc accatattcc
     2701 cgtcgatgag ttctacactt taaagcgtac agaacgcgga catttagtga aagagcagtt
     2761 ggccgggcaa cagaacatcc ccgttttcct gcgtcagcac tggcaaaaag agacgggctt
     2821 tgcgtttccc tccggacaca ccatgtttgc agcgagctgg gcgcttttgg ccgtgggtct
     2881 gttatggccg cgcagacgga ctttcaccat cgcgtttttg ttagtctggg cgaccggcgt
     2941 aatgggcagc cgtttgcttc tgggaatgca ctggccgcga gatttagtgg tcgccacgct
     3001 catctcctgg ctattagtta ccctggcgac ctggctggcg cagcgaattt gcgggccgct
     3061 tatgccgcct cgcgaagaag cgcaagaaat tgctgaacgc gagcaggaaa gctgacaacg
     3121 gttgattttc tgactattgc ccttaaatca tctgatggtg ggcgcatttc catttcgcgc
     3181 gaggcgggaa aatggtaatt tagaaggctg gatgcggtaa gttggacacg atttattcgc
     3241 gcaaaccaca taacgggaag taatgtgaaa tatttactca ttttcttact ggtattggcg
     3301 atttttgtta tttcggtgac gctgggcgcg cagaatgatc aacaggtgac gtttaactac
     3361 ctgctggcgc aaggggagta tcgtatctcc acgttgcttg ctgtgctgtt cgccgtcggt
     3421 tttgcgattg gctggctgat ttgcggcctg ttctggctgc ggatccgcgt ttcccttgcc
     3481 cgcgctgaac gtaaaattaa acgactggaa aacaagctct cgccagcaac cgacgttgcg
     3541 gtccctgccg attcgtcggt tgtaaaggaa taatcattta tgttggagtt gttatttctg
     3601 ctgttgcctg tagccgctgc ctatgggtgg tatatgggtc gcagaagtgc gcaacaaaca
     3661 aaacaggatg aagctaaccg cctgtcgcgc gattatgtcg caggggttaa cttcctgctg
     3721 agtaaccaac aagataaagc ggtggatctg ttcctcgata tgcttaaaga ggataccggc
     3781 accgttgagg ctcatctcac tctcggtaat ttgtttcgct ctcgcggcga agtcgatcgc
     3841 gccattcgta ttcatcaaac gctcatggaa agcgcttcat tgacctatga acagcgttta
     3901 ctggctgttc agcaactggg gcgcgactat atggccgccg gtttatatga ccgcgcggaa
     3961 gatatgttta accaacttac cgacgaaacg gaatttcgcg taggcgcgtt acagcagctc
     4021 ttgcaaatct atcagctaac cagcgactgg caaaaggcga tcgaagtagc agaacggctg
     4081 gtgaaactgg gcaaagataa acagcgtatc gaaatcgccc acttttactg tgagttagcg
     4141 ttacagcaga tgggcaacga cgacatggat cgcgcgatgg cgttgctgaa aaaaggtgcc
     4201 gccgcagata aaaatagcgc ccgggtgtct atcatgatgg ggcgcgttta tatggcgaga
     4261 ggggattacg ccaaagcggt cgaaagcctg caacgtgtga tcgttcagga taaagagctg
     4321 gtcagcgaaa cgctggagat gttgcaaacc tgttatcaac agctcggtaa aaatgccgag
     4381 tgggcggagt ttttacgtcg cgccgttgag gagaataccg gtgctggcgc tgagttaatg
     4441 cttgccgata ttctggaagc gcgtgaaggt agtgacgcag ctcaagtcta tatcacgcgt
     4501 cagctacagc gacatcctac catgcgggtg ttccataagc tgatggatta ccatctcaat
     4561 gaggcggaag aagggcgagc gaaagaaagc ctgatggtac tgcgtgatat ggttggcgag
     4621 caggtgcgca gtaaaccgcg gtatcgttgt cagaaatgcg gttttaccgc ctataccttg
     4681 tactggcact gtccgtcctg ccgggcatgg tcgaccatta aacctattcg cggacttgat
     4741 gggcagtagt atataaaaaa aacctcactt tagttacaac atacttaatg acataagaca
     4801 agaaacgacg ctggcatcgg cggccagggc ttatcaggtt gtcaatcgaa cctgttaatt
     4861 tccctgcgcc gcaggtagaa tgcacgccgt ttatccaatt tgcgccactt ccggtgccca
     4921 tcatcaagaa ggtctggtca tgacgtttac tgcttcatct tcttcctgcg ctattactga
     4981 atcgcctgtc gttgtggcgt tggattacca tgaacgcgat aaagccctgg cgtttgtcga
     5041 taaaatcgat cctcgcgatt gtcgcttaaa agtgggcaaa gagatgttca cgctgtttgg
     5101 tccacaactc gttcgggatc tccagcaacg tgggtttgat gtctttcttg atctaaaatt
     5161 tcatgatatt cccaacacca cggcccgggc agtcgccgca gcggcagacc tgggcgtttg
     5221 gatggtaaac gttcacgcgt ctggtggggc gagaatgatg gccgcagcgc gcgacgcgct
     5281 ggcgccattc agtaaagatg cgccgttgct cattgccgtg accgtgttga ccagtatggg
     5341 aaccagcgat ctacacgatc tgggcgtgac gttgtcaccg gcggaacatg cggagcggct
     5401 ggcgcgcctg acgcagcaat gcgggctgga tggcgtggtc tgttccgctc aggaagctgt
     5461 cagatttaaa caggcctttg gcgctgcatt taagctggtg acgccgggca ttcggtccgc
     5521 aggcagcgag gcaggcgacc agcgacgcat tatgacgccc gaacaggcat tatccgctgg
     5581 cgtcgactat atggtgattg gccgcccggt tacgcaatcg gtagatccgg cgcaaacgct
     5641 gaaggatatt aacgcgtcac tgaaacggga ggcataatga gcgattccaa tagtcgtctg
     5701 gtttattcaa cacagacggg gcgcattgaa gaacctaaaa cggcgccggt tcgtcccaaa
     5761 ggggatggta tcgttcgcat tcagcgtcaa accagtggcc gtaagggtaa aggcgtatgt
     5821 ttgattaccg gtatcgagat gaatgatgcg gaattaacca aactggcggc tgaactgaag
     5881 aaaaaatgcg gctgtggcgg ggcagtaaaa gaagggatta ttgaaattca gggtgataaa
     5941 cgcgacttga taaaatcatt gctggaagct aaaggaatga aagtaaaatt agctggcggc
     6001 taatgaaaac gccacggttg taaattgccg tggcgtaaaa gtcaactttg tctatttttg
     6061 taatccagac ctgaaaagaa taaacgtatt attttgagcc gttcaatatt taaacgtctg
     6121 gattattttc caacctggtg accaatcacg ccgccgaccg ccgcgccgcc cagggtgcct
     6181 aatgtactgc cgtccgttaa cactgcgccg cctaacgccc ccgcacctgc gccaatagcc
     6241 gtgttgcgat cgcgcttgga ccagtttgag caggcgctca gagacattgc tacggtgatt
     6301 gccagcacag cagcggccat ttttttgctc atcataaaca taatactctc tcctgaatta
     6361 acgattcacg gaattaagct cactataact atagttaaaa taaaacatgt taagagattt
     6421 tccgtaaaac ctgattgcgc aggggtatat cacgcaggtg atagtcactt cctgttattt
     6481 cgctaatatt aattttacga cgttacgctc gttacaacag gtaaatagtc ttaattggga
     6541 tgtcagaaaa gtcttagaga gaggatgatt tgccatagag ggcaaaccat cgggaaatat
     6601 tttaaacgga tgagccaata acattgacta gcagccctgc atgctctaac tgcatttgat
     6661 cgctggcgga aattttggaa tccgtaatga cacgatggaa gcgagagagc gggcccaggg
     6721 gatagggatg cacacagcca aatttggagc tgtcggtgag gacaatcgct tctgagcctt
     6781 tttccagaac agcgttaacc acatccgatc gcatcatatc gcgtccggta aagccggtat
     6841 cagcctgcca gccatcaata ccgataaatg ctttgctgaa atgcacttga tggataaact
     6901 gtcgcgtcaa cggccctacc atgctttcac tttttttctg atagattcca ccgaggagaa
     6961 tgacttcgca aggggtttct ttgagcagat gcgcgatata actgctcacg gtgatgatcg
     7021 tgacatcttt ttgttccgcc agcgtccggg ccaatagcgc attgctactg ccattttcaa
     7081 taaaaacgga ttccccagga ctgaccagcg aggcggcgaa ctccgccagt cggcgtttta
     7141 gcgtgtagtt cgtcatcatg cgagtctcta cgtcatcgct ctcaagcgaa acggcgaaac
     7201 cgtgcgcacg gcgtaaatag ctctgttttt ccagggtatt cagatcctga cgaatcgtga
     7261 cttcagatac gccggtaatt ttcgccagtt cagcaacgct catctggcct ttatcaacca
     7321 ccatttgcaa aattgattgt tgtcgggagt tcatagtatt aattttattc gttaagagga
     7381 gtcaacagac agtcagagag ccgggaaggg ctaacggcca tcccggacaa ataatcgcta
     7441 tcagatttcc cagggcgacc cgggagcctg ggatggcgag ataccgtctt taacctgatc
     7501 taacagctct gctctcaata tttcaaggtt attgatggcc gagtggtaat cgccagcaac
     7561 aaggatatcc agcacggtat caatgcgtgc ggcaattcgt tgtgcttcga tatcagacat
     7621 gtttgtcatc cttaatgtca gaaaaggttt caattcatga tgcagaaatt aatctgaaaa
     7681 gagaagggaa aaatagggct atgcctgtct gcacaggctg ttctccctat tatcgccgcc
     7741 attaacgcat ttttttcgtc tgataacgtt tgtaccagcg ttcaaaagaa acggcgggca
     7801 taggtttggc gaataaaaag ccctgtcgtt cattgacgcc gttttttgtc aggaaggcat
     7861 cttctttagc attttccacg ccttcggcaa tcacttgtaa atttagcgcc tgagccaccg
     7921 cgacaatcgc ccgaaccaga gattgcgaca gcggttgctt atggatatct ctgacgaaag
     7981 cctgatccag tttaacggca tcaataggga accgggcgag ttgagaaagc gaagaatacc
     8041 ctgtgccaaa atcatccaga tgaatctggg cgccgagctg actaaattgc tggataaccg
     8101 atagcgccag cgtgtcgttt tcgatcaggc agctttccgt tagctcgaca tcgattgggc
     8161 aatactcaaa attcagatcg tacaaagcct gtttaagcgc agtaaaaagc gtctggtcgg
     8221 ccagttgtcg cgccgaaaag ttaacggcta cgcgcaagtt aatcccctta tcgcgccatt
     8281 tcgcaatctg gcgaactaca tccagaatca cccagcggcc cagcgggacg atgagtcctg
     8341 actcttcggc gtatgagatg aactccagcg gcggaattaa tccgcgttcc ggcgattgcc
     8401 agcgtaccag cgcttccagg ctacgtactt cgccgcgcca ggtaattttg ggctgatagt
     8461 gaataagtaa ctggtcgttt tccagcgctt ttcgcaggtt tgtatccagc cagtgatagt
     8521 caaatacgcg ctgattcatt tccggcgaaa aaacgcagaa ctgaccgcgg ccgccttctt
     8581 tggcgttata cattgcggtg tcggcagtgc gaatgagact ttcgctgtcc tgtccgtgcc
     8641 ggggggccaa cgaaatgcca atggcgcatc ccgtgtaaac ttcaatgagt ccaatgcgaa
     8701 acggttgccg cagccgggta aggattcgtg aggctactgc ttccagcgcg gcctgagacg
     8761 tatgggcaac gaggacaatg aattcatctc cccccagtct ggccagcaat tgatcttcct
     8821 ccagacaact caacagcgcc agtgaaacgg cctgtaagag ctgatcgcca aacatatgcc
     8881 cataggcgtc attaattttc ttgaagttat ccagatcgag ataaacgata cccacctgcg
     8941 actcgccagc cgaggcaata gcatgattaa taaattcatg aatagcattg cgattgggca
     9001 ggccggtgac ggtgtctgta ttcgccagta tgcgtaaacg ctcctgagcc cgcctttctt
     9061 cggtgatatc cgtgcctgcg cagatcagaa agatttcgtt ttttccgcta ccgttatgga
     9121 cgaatttatt acgaaataag aacagacgtt ggcctttacg agtctttatc cagcgttcga
     9181 tttcataggc attgccattg cgaaaaaaat tctcaatgta gtgtcgggag gcaaccgcct
     9241 cccggcgact cataaataat ttaaatacgc tttgaccaat tacatctcgc tcttttaagc
     9301 ccgtgtactc ttcgcataac cgattaaatc gacagatttt tccccgacta tccagtatcg
     9361 caatgactga gttggcttct gatacgattt gctcggcaaa agagagttcc tgcgcctgcg
     9421 ttggcgcgac ggcaggcgta tcaggccagg ttgccaggct gccagcccat tcacggttat
     9481 taatcttacg gcctaccagg tgcacagcgg taacctgttt ttctatcaac aacgttatca
     9541 gcagactgga cgtaatcgcc gttatttccc ggatacgccc ggcttgctcc ggcgatagct
     9601 caaccgtttt ttctgcatcc gtttcacctg tcggggagag atacagcacg ttgcggtcat
     9661 cagccagacg ccagtgagag tgaaggggat ttagcgccgt ttgttcctga atctgtttca
     9721 tcatgcgtac catcccattt aagcgccagg tgcccgaaaa gaaaggttag ccatgttata
     9781 aataagggta attatggctg aacatattgt tttatctatg tattcatatg taatccagat
     9841 tctggaaaaa gcatagtcgc cagctaaaaa taacaagaaa tggggcgctt gaataagatt
     9901 aaacttagag catgacggaa gggagaagaa gaaaagaaac ggcctttgcc ttctcagcaa
     9961 aggccgttga gcgagctaag cgtggttacg ctgccggtcg ggcaataatg ctgcgggttt
    10021 ccatgcgaac ttccgcaata gtgacatcaa tgacatccgt cactttataa accgtctcac
    10081 ctttaatctg taccgtaccg ttttcctggc tgcataccag ttcatcgcga acggcgtgca
    10141 ggaacggggc agggataaag gcgatagcgc cgttatcgac cagtcgcaca cgcataccac
    10201 cgcggctgac gtcaataatt tctgccgcga aacgggtatt tgtccccgcc ttatcgttaa
    10261 ggaagcgtgc atataaccag tcgccgacat cgcgctccgc catgcggttc aggcgacggc
    10321 gttccgccat ttgctgggtg atatcttcct gcggacgcgc aatagcttcc cccttgatga
    10381 ccgctttcag caggcgatgg ttaatcatat cgccatactt acggatggga gaggtccagg
    10441 tggcataagc ctcaagacca agaccgaaat gcggccccgg ctcggtgctg atttccgcaa
    10501 aagactggaa gcgacgaatg cggctgtcaa ggaaaccgga gggctgcgca tccagttcgc
    10561 gacgcagttt acagaagcct tccagcgtca gcacctcttc ggcatcgaca tgcagaccat
    10621 gcgttttcag cagcgcggcc agcgcgtcgg cattcgcggg atcgaagccc gtatgtacgt
    10681 tgtaaatacc gaaaccgagc ttatcgcgca gtacgcgcgc ggcgcaaagg ttagcggcga
    10741 tcatcgactc ttctacgata cggttagcga tacggcgcgg ttccgccaca atatccagta
    10801 cttcgccttt ttcgccaagc acaaagcggt aatccgggcg gtctttaaag actaacgcat
    10861 gatgatgacg ccactcactg cggcttagac aaatacggtg caacagacga atctgctggg
    10921 caatgccttc gttctccggc tgccaggtgc tgttattttc cagccagtcg gagacattgt
    10981 cgtacaccag cttggccttc gattcgatgg tggccgcaaa aaaggcaata tcatcgtcaa
    11041 tggtgccgtc cgcggcgatg atcatgcgac aggcgagcgc cggacgcact tcgttggcgc
    11101 gcagcgaaca cagatcgtca gacagctcac gtggcagcat aggaatattg aagcccggca
    11161 ggtagttggt gaaggcgcga attttcgcgg cgttatccag cttactgcct tcggcaatcc
    11221 aggcggtagg atcggcgata gccaccgtaa gctggagtct gccgtccgct aattcctcag
    11281 cataaagcgc gtcatccata tcttcagtgc tggcgctatc gatagtgacg aaattcagcg
    11341 cggtaagatc ctggcgctcc agcccttcgt ccagcatctc cgtcgctacg ccgttcggcg
    11401 cttctttttc caggttatgg cgggcaagcg taacccacca gggaacaaag tgatcgtcgg
    11461 caaaggtgat gtactgcgtt aaatcggcgt aaaacgaacg gtcgccttta agcggatggc
    11521 ggcgcatttc ggcaaccgcc cagtcacctt ctttgaactc atgctgaacg ccgcgcgcgg
    11581 cgcggcaggg aatcgcgtct ttcagcaacg gatgatctgg cacgatggac aggcggtcat
    11641 ttttaccctg aacttttccc acaaagcgcg tcaggaacgg ttcgatcagt tcttccggct
    11701 cggcagactc acgttctttt tccgtgtgga tgaccgcgac gatacgatcg ccatgcatca
    11761 cttttttcat ctgcggcgga ggaatgaagt agcttttttg cgcgtcaacc tcaaggaagc
    11821 caaagccttt ttccgtggct tttacgaccc cttcagcgcg cggcgtctgg gaatgcagtt
    11881 gctgtttaag ctgcgctagc agcgggttgt cctgaaacat attcgtctat tttcgtagcc
    11941 aaaagagcgg ctgacagttt tacgcgattc tgcctggcgc agcaagcgct ctttcagtaa
    12001 tggatgagtt aataggtttc gcccaacgcg atttttaaac gatttaacca tccgcacacg
    12061 ccacaccagc ctaacatatt aatggcctgc tccgatgaaa ctcccctggt gagtagcggg
    12121 aaaaaatgcg cggcgctaaa gcgatcgggc gctctggtga gccattgtat cgcctgtgtc
    12181 agcgcgggct caagttccca acgagcgatg tcgtcgtctt cctagcgtaa cgtgatgaca
    12241 gcacggcgcc acgcgccagg ttgggttgcc tgttcgttaa agcaggcggc gctgccgttg
    12301 atacgtgatg tgaggagcgt gataagtgga agtaaagaag ggggcgacgc agtgtgtaat
    12361 gtgctggtca gtatgcgttc gagtaacgcg aatgaagacg gatcgcgcat gagtaccggc
    12421 gccattattt ggcattgtga agacgaatat tgccgccgaa ctttggtatg ggcgagagga
    12481 tattctacca gactggcggc gggccgccat gtcgtctggg ggttttgaaa ccgcgcggcc
    12541 ctggcaaagc gctgcatctc ctggccgggc agctcgcgca cgggcagacg gcaaaacgcc
    12601 tgaaatatcg ccgctactcg cgcctgaaaa ccgataaacc caatgatctg attgatgagt
    12661 acggtatccc gggcggttaa tcccacctct gcaagctgtt cgcgggctcg cgtattgata
    12721 acggaggggg agccggcaag ctgacgagcg tattgcgtaa tttgcgccag ccgttgattg
    12781 ctttctcttg aggcgtcagg gccgggtagc ggcgccagac gtgcggcata atggcggcac
    12841 aaacgctgaa ccccaaatac ctgagcggcg gtaagggcgg tgctcatacg ttcataggcg
    12901 ctaaacgtat gaagccggtc gttgagaacc gtgcggggaa ataagacatc cgccaactgg
    12961 cgagctggct ttaaccatga ctcaaaaggc gtcaacgcgg tttctgctac cgctaaatcc
    13021 agtaaaaatc gatcgttaac atacgcggct tccggcatca gcgaaagcgg agtttgtgac
    13081 gacatagtgg attgtgtttc atgataccag tggcttttac ccgcttttcg gcattgttcc
    13141 atagggtttc ccgaggatga aatggcgatc gataatgatt cggcgtcgga tcgtttatgc
    13201 tggattatcc tggcgtatgc gggaaaggga tgaaagattg ttaggtgata acaaatatca
    13261 gaacgctata taacgagatg agcggtgagt gaggggaatg gggcagcaca gccgtgccgc
    13321 ccgctaataa acttaatgcg cttacttcag ttccagttca ttcattgccg caatgctgaa
    13381 cccgccgtca acatggacga cttcgccaga aatgcctgcc gagagatcgg aacacagaaa
    13441 cgccgctgag ttacccacat cttcaatggt cacggtgcga cgaattggcg taacggcttc
    13501 acaatgcgcc agcattttac ggaagtcttt aataccggac gccgccagcg tgcggatcgg
    13561 gcccgcagag atggcgttga cgcgaacccc ttccggtccc atagcgtttg ccatataacg
    13621 cacgttggct tccagagagg ctttcgccag acccatgaca ttgtagttcg ggatggcgcg
    13681 ctccgctccc agataagaca aggtcaacag cgcagaaccc ggattcagca tggtgcggca
    13741 ggctttcgcc atggcaacaa aactgtaaga gctaatatcg tgagcgattt taaagccttc
    13801 gcgggtaacc gcattaacat aatcgccgtc cagctgatcg ccaggcgcga aaccgatcga
    13861 gtgaacgaaa ccgtcaaatt tcggccaaac gttacccagc tccgcaaaca tagcgtcaat
    13921 gctggcatct tcagcgacat cacacggtaa aacgatgctg gaacccagct gggcagcaaa
    13981 ttcttctacg cggcctttca gtttgtcgtt ctggtaggtg aacgccagtt cagctccttc
    14041 gcggtgcatc gcctgtgcga taccgtaggc gatggacagt ttactggcca cgccagtgac
    14101 cagaatgcgc ttaccggaaa gaaaacccat agctttaatc cttatagtca ttgcttattt
    14161 tttgctttta cgaacaatgg ttaacagcaa cttttcaaca ttattcgaaa ttagtctgaa
    14221 attatatccc actcctggcc ccgtgtgtca cgctattttt ccgccgctat ctccggcagg
    14281 tgacgttcta aaaccacacg gtaacgaagt ccctgaggat tttgagcact ccccagggcc
    14341 aaactggcaa atcaaagagt ctaatgggac aggccctacg gtgcagtata ccagctggtg
    14401 taaggttcgc ctcatccaac cagagacacc gggacggaca gcaagtacga tagcgatgcg
    14461 ccttccacca gacaaataaa ggttctgtag gaagcctgaa tattcatcca aatggtttac
    14521 ctcacctatt agcgatgtta tggacatgta attttaacca gcaaatgctt aacaaaaata
    14581 atttcttttt taggcgctga aggttttctc tatttattga tgcagagtaa tactgaatat
    14641 gaaaaatttt ggaaagcagg tgattacagt agttacaaat caggttttta tatgtttgca
    14701 tgtatattat aataaatttt cagaggatga gacatatgcc gtttacattt cagatcggaa
    14761 atcatagttg ccagatatca gaaagacatt taagagatat cattgatcat aaaagagagc
    14821 atgttttttc aacgtatgag aagttcatag attttttcag gaatatattt accagtcgaa
    14881 gtttaatctc tgattataga gaaatctata atctactgtg ccaaaaaaac gagcgtccag
    14941 atattacgaa gcctttctcg ctacgaccat tttcgaagcg agatgaagac tgtacacgat
    15001 ggcgccccct tcttggatat attaaactta ttgatgcctc caggcctgaa acaagagata
    15061 aatacactgt agaggtatta gcacatcaag aaaatatgtt actactacag atgttttatg
    15121 atggaatgtt agtgaccgag acggagtgct ctgagcgttg cgtcgatttt ttaaaagaaa
    15181 cgatgtttaa ttataattcc ggggaaatta cgcttgccgc tttagataat gatcacctga
    15241 cgccgagcga agcaggtagt aatgggatct atgaggcttt tgagcatcgt ttgatagact
    15301 tcctgaccac gcccgccacg cccgccacgg cgtctggtga tgagagcggc gctattgatc
    15361 agacagatac atcacaacca gcggcaatag aggcgtttat taactcgccg gagtttcaga
    15421 aaaatattcg catgcgtgat attgaaaaaa ataaaatagg tagcggaagt tatgggacag
    15481 tctatcggtt acatgatgac tttgttgtta agattccaat taatgagcgg ggaataaaag
    15541 tggatgttaa ctctccggag catcgtaatt gtcatcctga tcgtgtcagt aagtatttga
    15601 atatggccaa tgacgacaag aatttttctc gttcggcctc catgaatatt aatggtaaag
    15661 acgttacagt tttagtttca aaatatattc aaggtcagga gttcgatatt gaagatgaag
    15721 ataactatcg aatggcggag gcgcttcttg aatcccgggg ggtttatatg catgatatag
    15781 ataacgtagg taatattctg attaaagagg gggtactttt ctttgtcgat ggcgatcaaa
    15841 tcgtgctgtc acaagaatcc cggcaacagc gaagcgtttc tcttgcaaca aggcaactgg
    15901 aagagcaaat taaggcccgt tacctggtaa aattaaagca gtccgagacc gaaggaaata
    15961 ctgaagatat tgaatattat aagtcactta ttacagaact tgatgagtta atcggagagg
    16021 aagaacaggc acctgcgcca ggaagacgtt ttaaactagc cgcgccggag gaagggactc
    16081 ttgtggctaa ggtattaaag gatgaattaa aaaaatagca tttagttccg ttcttttctg
    16141 cgaatcgccg ggggcacatt cgctacagat ttaccaatca attattgaga gttgctattc
    16201 gcttaaaggt cgttcggggg atctggacag cctgtagcgg agatgcaact cgccactagg
    16261 gttggcgatg ccgcgctgcc atagtgggtg aaatgccacg cgatggtgca acactattaa
    16321 ctcgccttga tttttcccct cttcctgaca agaaaaacct ggctttacgg atggtctcat
    16381 gccgtcgtat tagcgttgtt cggcgtagta tgtaaattta cttatagcaa tagaagaaca
    16441 ttctcaaaac ataaaattag caagttatca tgaagttaat atatattgtt tttttcgatc
    16501 attttttaga tattgatcgt ttttactgat tgatttgcgt taaaagcgca ttatcaggga
    16561 gttaagatca agtggagtgg tcacatgcgc tattttttta tggcagagcc gataagggca
    16621 atggaggggg atttactggg tgtcgaaatc actacccatt ttgcatcgtc gcccgctcgt
    16681 ccgctacacc ctgagtttgt tatctcgtca tgggacaatt cgcagaagcg ccgttttctg
    16741 cttgatctgt tgcggacaat cgcggccaaa catggctggt ttctacgcca cggcctgttc
    16801 tgtatcgtaa atatcgatcg gggtatggcg cagcttgtcc ttcaggacaa agatattcgc
    16861 gcattactac acgccatgct atttgtggag ttgcaggtcg ctgaacattt ttcatgtcaa
    16921 gataacgcct taatcgatcc tttaatacac gcgcttcata agcaacctaa tccattatgg
    16981 ctgggcgacc tgggcgtagg gaacgcaacc gctgcgccat tagtttgcgg gtgttttagc
    17041 ggcgtaaaac ttgatcgcag cttttttatc tcacaaattg aaaaaatgac gtttccgctg
    17101 cttgtcaaac atatccggcg ttattgtgac aagatcgtgg tgggtggcca ggaaaacaca
    17161 cgctatttgc cggcgttaaa aacggcaggc atttgggcaa cccagggcac gttatttcct
    17221 tccgttgcgt tagaagaggt tgaaacattg ctgttgggcc gtcgcgtgaa caccctcaga
    17281 gaatcgaact gagggtattt gtgtcgctta gcgatccttt cgccatgcgt cagcggtcag
    17341 cgcctcgcca aaatggcctg cgattaaacg gcgggtaagc tcatgtagcg gagaggcgag
    17401 cacatcggcg gtgctgccgc gttcaaccac taccccctga tgcatcacta atacctgatc
    17461 gctaatatgt ttcatcatgc cgatatgctg cgtgacgtag atataggaga tgccttgttt
    17521 ttcctgcaat tcaagcatca gattgatgag ctgcgagcgc atggacatat caagcgaagc
    17581 cagcgcttcg tccgcgataa tgacttttgg gcgtaaaatc agcgcgcggg ccagacccag
    17641 acgttgtttc tgtcccggcg ccagcatatg cgggtagtag ctcacgtgat cgggcaatag
    17701 ccccaccata cgcatcgtct cgacaatctg tttgcgccgc tgttccggct ccagaacggt
    17761 attaaggcgc agggggaagt caagaatctg tgaaatacgt tgacgtggat tcagtgacgt
    17821 tgaagggtcc tgaaaaatca ttcgaatacg ttggcttcga aacgaatagt cgccgtaatg
    17881 caggggatga tcgtcaataa gaagctcgcc gctggtgggt tcaatcatgc cggccagcat
    17941 ctttgccaac gtggatttgc cggaaccgtt ttcgccgata atggccaggg tctgacgctc
    18001 acgaagcgta aagcttaatg gtttcacggc gtcgacggtc tggcggcgaa accatcctgt
    18061 tcggtagcga aaggttttac tcaggttgcg cacttcaagc agagtttcca ccatatcact
    18121 ctctctccat attcagcgga aaatgacagg catagagatg atttttcgcg ccggttaagc
    18181 gtggcgtgat aatgcattct cgttgcgcgt aagggcagcg cggccccaga cgacaaccta
    18241 tcggtaactg ctccagtagc gggatcgcgc ccggcagcgt attcagacgg cttttatgcg
    18301 gcatcgcgct gccaaaatcc ggaatcgcac ggataagcgc ctgcgtataa ggatgatgtg
    18361 gtgtcgtcac cagatcttta cttggcgcgg tttctaccgt ctggccgcag tataagacgt
    18421 tgattttgtc agcccactga ctcagcattt gcaggtcgtg gctaatcaac agaatggtgg
    18481 tattactgtt ttgattcagt cgcgtcaaca ggcgaaaaat ttgcgcctgc gtcgtcggtt
    18541 ccattgagtt ggtgggttca tcagcgatca ggagtcgcgg ttgattcgcc agcgcgatag
    18601 cgatcataac tttctgacac tcgccatcgg ttagttcata gggaaaactg cgcatcgcgt
    18661 ctttatgatc tttaattccc acccggtgca gtaattcaat tgcacgccgt ttacgccagc
    18721 ctaaacgctg ccaccagcgg cctttatagg tccaggcggg aatattttgc attaactggc
    18781 ggccgacgcg ttcggaagga tcaaggcacg actgcggctc ctggaagatc atcgacacat
    18841 tatgcccgac cagcttacgc cgttcacgag aggagaggcg cagcagatcg atatcatcaa
    18901 aacgcatacg gtcggcagtg actcgccagt tgtctttcgc gacgccgcaa atagctttag
    18961 caatcaagct ctttccggaa cccgattcac ctaccaggcc gcgaatttca ccttcgctta
    19021 atgtcatact gacgcgatcg accgctttta cccaaccttc gctggtttta aattcaatgg
    19081 tgagattgcg gatatccagt aacggcatta ttccaccccc gcaataatcg cacgacgaat
    19141 cccatctccg agcaggttta ccagtaaaac actgagcgtt atcgccgcgc cgggtagcat
    19201 aacggtccac ggcgcgacat agattaactc cagcgcatcc cccaacatgg cgccccattc
    19261 aggagaggga agctgcgcgc cgagatctaa aaatcccagc gcggcgatgt ccagaatcgc
    19321 catcgacagc gcccgggtaa tttcggtgac cagaccggcg gtaatattcg gtaaaatggc
    19381 gaaccacaga atattcagtg ttgtcgcgcc atccagacgg gcagcaatga cgtactcttt
    19441 ttccagttca tcatgcacca tgctatagac ggaacgtacc attcgcggca acagggccag
    19501 ccagacggca aacatcgcgt gtgacagatg tgggccggca aatgccacaa cgataatcgc
    19561 cagcaagagc gaagggatgg aaagcagcgt gtccagaata tggttcagta cggcagagcg
    19621 taaaccgtgg gtcgcgcctg ccactacgcc gaggactaat ccacatagcg tagccgccag
    19681 cgttacgata aacgcgccgc cgaccgtggg cgccgcgccg cttaacaggc ggctcagcac
    19741 atcgcgcccc agatcgtcag tccccagaaa aaaggagact tcgccatagc gtgaccagga
    19801 gggtggcagt agctgatagc ccagaaattg ctgatcgata ccatagggcg cgatccagcc
    19861 gccaaaaata cacagcaacg ccagaccggc gcatccatac agacccacca tcgcaggcgc
    19921 gtcgctataa aatttacgcc aggcagtgcg cagggtgcct ggcgggcgct tttcgctgta
    19981 gacgctatcg taaggcatat ttactcgttt tatttttgtt taccatgctt tatgtctttt
    20041 gaaattttca agcactatca attggttatg gattgtaagc gtctcaattt tgtgtacttt
    20101 gcattaatgt gaaggttatc aatttatgca aaatgtatac acagatgtgt atatcctctt
    20161 atggagtgta cacattgctt gccgatacaa aattaagaaa ggctcctggc aaaaaaagag
    20221 accaaatcaa ggtcatctca gacgctcatg gtctcaatgt caggctctct acatccggca
    20281 gtataacatt cttttaccga tacagatgga acgggaacgc tgctcaactg acgattggcg
    20341 attatccaac catatcacta tctcatgcca gggaacgccg tcagtacttt agatcatggt
    20401 taactgaggg actcgatcct cgtcgccaga tggtgctgga gaagaagaaa aaaacagaag
    20461 cgttaaccgt aaaagaacat acgactactg ggagaagttt tagcactgta cggaatttgg
    20521 gccagggtca ttaagaccga cagtggcgtc tggcactagt ttgaagtatg gcgcgatcag
    20581 gatgttgcag tatttgtaga agcggcgcgc ggcggcatcc ggggaatagt ccggcttaaa
    20641 gtatctggcg gagtttgtgt tcagttgcgg cattagtctt tgggaggttc acaataagac
    20701 agatcggaat actccggcat gaggtgttgc gtcttaaact gctgcagcgg gtcagcaggg
    20761 ggaatgatat ttattagctc agatgtgagc tgacagttac cgattattta tacagtaact
    20821 gtcagtttac aatatcgtaa aaacctaaca tagacctttt taaacgtact taatgtgatc
    20881 tcatctagta tgaggttttc ttgctgccgt gcaacaatac ctacagctgc tccgcaattt
    20941 acatcattag tgtattgttg cagatcaatg tgacccgaaa gagttttata atgagtgctg
    21001 attgtttttt caaattcgga cgctgcgtct ttacttataa aaacaccagg atataagtgc
    21061 ttcccagaaa aaactctgga tatttgttgt cccagcatat gcaggcaagc agatttgttg
    21121 aagcctttct ctcccgttac taacaagaaa ccactttttt gctcaacctg tgaaatatta
    21181 taagcaatat tagctaccct aataatatct ttggctaggt tagttgcgcc atttccgata
    21241 gtggcagtgc cgggggctgc ccctctaata ttgaggatcg cggcagaaat aggtttcatc
    21301 atattcacct ctcatgtagt gataatggtt attatgtgat atttactttt taatatttat
    21361 ttgttatcac ttacctgctg tccagtcaat attaatacat gattacgcct gtttttacat
    21421 taattttact ggtgcgggat tgtatgatct tgttattact caacgtaagc ctctgtttat
    21481 atataataaa attggagaaa tctgttgact gtattttatt tgcattaata tagatatgct
    21541 atgaattatt actcttccgt attctcgcct aacaatgtca ggcatgcata atctaacgtt
    21601 attagatgct atatccgtaa ccgggtctga ggtgagcatg gctaaattac cgcgccgtaa
    21661 atgcaaagtt tgtcgggaat ggtttcctcc tgcttacagc aacgttgtct ggtgctgtcc
    21721 tgaacatggt gctatctacg cgctggaact gcgtgccaaa gaaaagagta aagccgcagc
    21781 caggtgtatc agaggtaaac accaggcgga taaagccgaa cgccaggcga acggttgcat
    21841 gcttagagag cgtcaggcag tgttgtatac actcagcagg aagatgttcc gcaaacatct
    21901 gcgctgaagg cggtggcata aggggatggt cgctgaaatc gagcaggtca ttgagaagtg
    21961 acataacaaa acggctccct gtaggggaag ccgttatagt gccgcagttt aaggatcggc
    22021 attgcgcaat taccgggatt ttcgtgcccg taaaccgggg aggtttgttt ttctaatttt
    22081 atccagcgag acgtaaagta tgactgagct atggttagca ctcggtttaa cacattaggt
    22141 ggtttgcctg atagtttctg taggagagag tatgataaaa aagtaatatt atttttagta
    22201 tttttttggt cattcaggtg ccgttgattt tgtatatcgt gttgactcga gaccttcaga
    22261 tgtgattttt cgggatggtt ttgcttctca cggaaataac aggaatcttc agcaacatat
    22321 aagagatgac tcctgtgtat ccggtagtcg agacagtact atattgcgac tatctcagat
    22381 attaatgagg cttataatat agcacgatta tattactcca gagcaacatt tagcggcagg
    22441 ttgtacagat acagaatccg tgcagacaat agtttctaca gccttccgcc gtctgttgct
    22501 tatattgagt tatgtggtat ccagtttggt cattttgagc gagtgatgat gcggttacaa
    22561 agtgagtatg tatctgtaaa ttctatccca attgaaaata tccatgaagc agttgagctt
    22621 gtttacgata gaaatacaag tatggtaaat attgttggag tggattatga aaaagaaatt
    22681 aaaggttctg actcttgctc ttgcgtcaat atccagtgtt tgttatgcag ctatggctga
    22741 ttatgatacg tatgtgagta atgttcagat taacaacctg tcttatggtg tgtatacgtc
    22801 agggggtaag gaaactcagt ttttttgtat cggactgaag cacgggagtg aagctattag
    22861 tatcaatgcc atgtgtaaag tggatgtgta cgggaatcat aaacaggggt ttgataacat
    22921 gctaaataca gcaaagtatt attatacaac agggggggat gtaaggatat attataaaga
    22981 gaatgtttgg cgcgaccccg atttcaaaag tgcattctct tccagggaat taattgcgat
    23041 aactacttgt agctcatcaa gttattgtat ggggcctacg gtgacaaatt aaatgttgct
    23101 gggtattaaa cgctctaaag aacaggctta atcttgttgg tgagacgatt atgtctgaac
    23161 ctttatcagg ttcctgtatg gctgtagcga tctgtggggc aacgatattc agaccgttta
    23221 ctggagcgga ttttgggatt gtattttgag catttgcggg aacgttgttc gtggcaacaa
    23281 tgccgcagat actgtcaccc caaagcactc cttcaagctt ctgacaactg tgggtggttt
    23341 gtttgatgga gtgcctctta agattagaac tctcaccata aaggctgcgc atttacgtgg
    23401 cctttttcgt attcaggcta acgggaagca ctcactacgc gctttgttgg ataaatccag
    23461 cccgtgaagc ctgttccttt tagtcaggac gttatcataa ggggacatac tggttgtatg
    23521 gaagcgtgat cgcctgggtc gcagtatgcg tcatctggtc gttctggtag aagaattgcg
    23581 cgaacgcggc gttaatgtcc gcagcctgac cgacagcata gacacgtcga cgccaatggg
    23641 gcgattcttc tttcatgtca tgggcgcact cgctgaaatg gaacgtgaat tgattgtgga
    23701 aagaacccgc gctggactgg aagcggcaag ggcgaggggg cgtaatggtg gccgacgacc
    23761 gaaactaaca ttggaacaat aggcgcaggc ccggcgtctg attgggtcag aagtaccgcg
    23821 acagcaggta acgattattt atgggggctg tcgacgctgt acagaaaact tcctgcagca
    23881 tcacgcagtg aaacccggag gcgctgatag agaagataaa tctccggcaa tcatcatcga
    23941 agcatggact gccggagaaa atagaaaaca atatgtatat atttacgtac taaaaaacga
    24001 acttatcaca aaaataaaag cataactttt tgatttaatg atatttttat tgcttcttat
    24061 cgtaaggcat accattcctt atgtttcaga gggttagcca tagcacccaa aatatcggaa
    24121 atcacattga ccacaataac cagcgaccca atgaccatca cgccagcgga aatagcggca
    24181 tagtcctgct gacgaatggc gtgaattaac catcgtccca gccctggcca gctgaaaacc
    24241 atttcggtaa tcatcgccag cgttaacatg gttgaaaact gcagaccaag acggggaatg
    24301 accggcggca gcgcattatg caacacgtga cggcgtaaaa tcgtaaagcg cgacaagccg
    24361 cgcgtggccg ccgctttaac gtagttctga tcgtagacct caatagtgct gattcgcatc
    24421 aggcggatca cctctgtggt cggcgcgacg gaaagcgtga gcaccggtaa aaccatatgt
    24481 cgtatggcgc tcattaccat ttcatcacgc cacggcgaat ctgaaatcca ggcgtcaatg
    24541 atggcgaaac cggtaaccgg tttaacttca taaagcaggt caaatcgccc ggataccggc
    24601 agccacccca gtgtgagcga aaagaacagt gtgagcagaa gcgccagcca gaaaaccgga
    24661 attgagaaac ctaatagcgc cagcgcgctg ataaaacgat ccggccattt gctacgcgtc
    24721 acgccagcca gcatcccgac cgggatgccg accatcagcg caaaaccaaa ggcgagaatg
    24781 cacagctcca tcgtggcggg aaacacctct ttaagctgtt cggagatcag ctggccgtta
    24841 atgctggaca cgccaaagtc ccagtgcagc agaccgttga accagaaaac ccaggcattc
    24901 cataatgatg cgccttgtag cggcgcgtgc ggcgtaaaat agctcaggct aaagccgata
    24961 aaggtcagga agaatagcgt caccagcaac agcaataacc gacgcagggt gaagataatc
    25021 atggtttttt cacctcttcg tgtttttcgc gggagacgcc ggcaaaagac gcattgccga
    25081 acgggcttaa caccagtcct ttaatatcgt agcggtaagc ctgtaagcgt agtgatgatg
    25141 ccagcggcag tatcggcagc tctttctcca ggatattctg cgcttcgtca tacgcttcta
    25201 tgcgcgaagc caactgctgc gacgacagtg ccttacgcag cacgctgtca aattcagggt
    25261 tacaccagtg ggcgaaattg gtttgcgaat tgatggccgc acagcttaac agcggtctga
    25321 aaaagctatc cggatcgttg ctgtccgtgg cccagccgga taaggtcaga tcgtgattca
    25381 tatccatcag gcgcgcctcc tgaaaacgac cttcaaccgg cacaatgacc acttttacgc
    25441 caacttgcgc catatccgcc tgaataagct ccgccgtttt tagcgggctt gggttccagg
    25501 cctgagaact ggtcggcacc cagagatgca gcgtaagatt ctcaatgccc agcgctttta
    25561 gttgttcgcg cgatttttgc ggattgtact ccgtaatttt ggcatcgtta tcgtaagccc
    25621 atgaggctct cggtaaaatg gaggctgcgg tttccgccgt gccgtaataa atcgactgca
    25681 tcaggcgctg gttgttgatc gataaggcca gcgcatggcg cactgcggga ttattcaacg
    25741 gcggcttgtc ggtgttaaag gccagatagg cgatattcat ccccgggcgc aacgtcagac
    25801 gcaaacgcgg atcgtcgcgt aaaatagtta gctggctggc ggcgggccag gccagaacat
    25861 cgcattcacc ggtcagtaat ttcgataaac gcccaatacc cccggagcct aaatccacca
    25921 ccacttgcgg cattagcggt ttgccgcgcc aaaacccatc gtggcgctgg agacgaataa
    25981 actgcccggc acggtactcc gaaagctgga aaggcccggt gccgaccggt tgccgatcaa
    26041 gcagttcctg acgatctttt cggctaagct gcgcggcgta ctcagcagac atgacggaag
    26101 cgtagtgcgt ggccagatgc cataaaaagg aggcgtctgg ctgcgtcagg cgaaactcaa
    26161 cggtgttatt gtccagctta cgcacgcttt ttacattgtc ggcgaactgt aggctatcaa
    26221 agtaggggaa gctactgccg ttgatgttat gccacggatg tcgacgatcg aaaatccgct
    26281 gaaaggtaaa gacgacatca tcagcattga gttttcgggt cggcgtaaac caggcggttt
    26341 tttgaaagga aacgtcgcgg cgcaggtgaa aatggtacgt tgccccgtta tccagcactt
    26401 cccagctttc tgccagctct gggactaaac gataagtata gggatcgaca tccaacaggc
    26461 ggtcatataa ctgggcggcc agggtatcga cgatgaggcc gctactcgct ttttgcggat
    26521 taaaggtgtt gacctgcccg ctgacacaat acacaaagcc gctatcgcga atatctgcac
    26581 tcgcagtttg ttcgggcgca gtcgcagccg tagcctgact actcagtaga cccgctatca
    26641 cgatcagaga tgataaaacc aggcgcataa tagttaagtt tttgaagttc aatttgcaaa
    26701 gtgtatcgca cttcggcccg ccacgtaaaa atgtcggtgg ataactggcg taaatgtcgt
    26761 caattagccg gagaaatagc taaagctgat gctttttaag caaggcgcga aactggtggt
    26821 aggtgagcgc cagcaaatcg gcggctcgtt tctggttaaa tttcgcctgc tgtaagctac
    26881 gttgcagcag cgctttttcc tgttgcagtt gaaactcccg caagttgagc ggcaggtca
//
LOCUS       DAGWFR010000042        26372 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.043, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000042 DAGWFR010000000
VERSION     DAGWFR010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 26372)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26372)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26372
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.043"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..332)
                     /locus_tag="MOX77_001821"
     CDS             complement(<1..332)
                     /locus_tag="MOX77_001821"
                     /inference="COORDINATES: protein motif:HMM:NF033677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BapA prefix-like domain-containing protein"
                     /protein_id="HCA3357366.1"
                     /translation="MRLLAVVSKLTGVSTTLESSAVTLNAPSIVKLSVARDEISQLTR
                     INQDLVVRLHSGETITIKNFYVTNDLGASQLVLAENDGTLWWVENPQAGLHFEQIADI
                     NELLVTSGA"
     gene            complement(952..1434)
                     /gene="smpB"
                     /locus_tag="MOX77_001822"
     CDS             complement(952..1434)
                     /gene="smpB"
                     /locus_tag="MOX77_001822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HCA3357367.1"
                     /translation="MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSL
                     RAGKANIGDSYVILKDGEAWLFGANFTPMAVASTHVVCDPTRTRKLLLNQRELDSLYG
                     RINREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRSDLKEREWQLDKARIMKNAGR
                     "
     gene            1623..2060
                     /locus_tag="MOX77_001823"
     CDS             1623..2060
                     /locus_tag="MOX77_001823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001543334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RatA family
                     toxin"
                     /protein_id="HCA3357368.1"
                     /translation="MPQISRTALVPYSAEQMYQLVNDVQSYPQFLPGCVGSRVLESSP
                     AQMTAAVDVSKAGISKTFTTRNQLTRNQSILMHLVDGPFKKLIGGWKFTPLSPEACRI
                     EFQLDFEFTNKLIELAFGRIFKELASNMVQAFTVRAKEVYRAG"
     gene            2050..2340
                     /locus_tag="MOX77_001824"
     CDS             2050..2340
                     /locus_tag="MOX77_001824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RnfH family protein"
                     /protein_id="HCA3357369.1"
                     /translation="MPDKLVVEVAYALPEKQYLQRVTLEEGATVEEAIRASGLLELRT
                     DIDLAKNKVGIYSRPVKLTDTVQDGDRVEIYRPLIADPKALRRQRAEKSAGR"
     gene            complement(2506..2844)
                     /gene="bamE"
                     /locus_tag="MOX77_001825"
     CDS             complement(2506..2844)
                     /gene="bamE"
                     /locus_tag="MOX77_001825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HCA3357370.1"
                     /translation="MRCKTLTAAAAVLLMLTAGCSTLERVVYRPDINQGNYLTPTDVA
                     KVRVGMTQQQVAYALGTPMMTDPFGTNTWFYVFRQQPGHENVTQQTLTLTFNSSGVLT
                     NIDNKPALTK"
     gene            complement(2993..4654)
                     /gene="recN"
                     /locus_tag="MOX77_001826"
     CDS             complement(2993..4654)
                     /gene="recN"
                     /locus_tag="MOX77_001826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HCA3357371.1"
                     /translation="MLAQLTISNFAIVRELEIDFQSGMTVITGETGAGKSIAIDALGL
                     CLGGRAEADMVRTGATRADLCARFALKDTPAALRWLEENQLEEGRECLLRRVISSDGR
                     SRGFINGTAVPLSQLRELGQLLIQIHGQHTHQQLTKPEQQKSLLDSYANEAALAQQMA
                     AHYQLWHQSCRDLAHHQQQSQERAARAELLQYQLKELNDFNPQAGEFEQIDEEYKRLA
                     NSGQLLTTSQNALALLADGEDVNLQSQLYSAKQLVSELVGMDSKLSGILDMLEEATIQ
                     LTEASDELRHYCERLDLDPNRLFELEQRIAKQISLARKHHVSPEALPQLYQSLLEEQQ
                     QLDDQADSLETLTLAVNKHHQQALETAQALHQQRQFYAQELGQLITESMHLLSMPHGL
                     FTIDVKFDEHHLSNDGADRVEFKVTTNPGQPLQPIAKVASGGELSRIALAIQVITARK
                     METPALIFDEVDVGISGPTAAVVGKLLRQLGESTQVMCVTHLPQVAGCGHQHFFVSKE
                     TDGAMTETHMQPLDKRARLQELARLLGGSEVTRNTLANAKELLAA"
     gene            complement(4740..5618)
                     /gene="nadK"
                     /locus_tag="MOX77_001827"
     CDS             complement(4740..5618)
                     /gene="nadK"
                     /locus_tag="MOX77_001827"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020239499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) kinase"
                     /protein_id="HCA3357372.1"
                     /translation="MNNHFKCIGIVGHPRHPTALTTHEMLYRWLCDQGYEVIVEQQIA
                     HELQLKNVPTGTLAEIGQQADLAVVVGGDGNMLGAARTLARYDINVIGINRGNLGFLT
                     DLDPDNALQQLSDVLEGRYISEKRFLLEAQVCQQDRQKRISTAINEVVLHPGKVAHMI
                     EFEVYIDETFAFSQRSDGLIISTPTGSTAYSLSAGGPILTPSLDAITLVPMFPHTLSA
                     RPLVINSSSTIRLRFSHRRSDLEISCDSQIALPIQEGEDVLIRRCDYHLNLIHPKDYS
                     YFNTLSTKLGWSKKLF"
     gene            5742..6332
                     /gene="grpE"
                     /locus_tag="MOX77_001828"
     CDS             5742..6332
                     /gene="grpE"
                     /locus_tag="MOX77_001828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HCA3357373.1"
                     /translation="MSSKEQKTPEGQAPEEIIMDQHEEVEAVEPNDSAEQVDPRDEKI
                     ANLEVQLAEAQTRERDTVLRIKAEMENLRRRTEQDIEKAHKFALEKFVNELLPVIDSL
                     DRALEVADKANPDMAAMVEGIELTLKSMLDVVRKFGVEVIAETNVPLDPNVHQAIAMV
                     ESEEVPAGNVLGIMQKGYTLNGRTIRAAMVTVAKAK"
     gene            complement(6414..6971)
                     /locus_tag="MOX77_001829"
     CDS             complement(6414..6971)
                     /locus_tag="MOX77_001829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001688360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytoplasmic protein"
                     /protein_id="HCA3357374.1"
                     /translation="MSEDYVIEWDKNFADDLNVVANVFLSHNPTLWPTIFSQLSTQPE
                     IFEDEDEDEYGLQDVLDCSGGDLGNNELAQAFLQVLRGEGFIHLVDWKGEDEEGELAN
                     FAADRFYELTKNLTDSEELRNLLVEITQEDEISDVCEAGDRYLDEIFERIQTELNKRG
                     FQIFDLNEGSDTYNVVVLPMSEYKK"
     gene            complement(7092..8378)
                     /locus_tag="MOX77_001830"
     CDS             complement(7092..8378)
                     /locus_tag="MOX77_001830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026171.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HCA3357375.1"
                     /translation="MEHISTTTLIIILIIMVVISAYFSGSETGMMTLNRYRLRHMAKQ
                     GNRSAKRVEKLLRKPDRLISLVLIGNNLVNILASALGTIVGMRLYGDAGVAIATGVLT
                     FVVLVFAEVLPKTIAALYPEKVAYPSSFLLAPLQILMMPLVWLLNTITRLLMRLMGIK
                     TDIVVSGSLSKEELRTIVHESRSQISRRNQDMLLSVLDLEKVSVDDIMVPRNEIIGID
                     INDDWKSIERQLTHSPHGRIVLYRDSLDDAISMLRVREAWRLMAEKKEFTKEMMLRAA
                     DEIYYVPEGTPLSTQLIKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFTTSMS
                     PTLAEEVTPQNDGSVIIDGTANVREINKAFNWHLPEDDARTVNGVILEALEEIPVAGT
                     RVRIEQYDIDILDVQENMIKQVKVVPVKPLRESVAE"
     gene            complement(8398..9189)
                     /locus_tag="MOX77_001831"
     CDS             complement(8398..9189)
                     /locus_tag="MOX77_001831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inner membrane protein YpjD"
                     /protein_id="HCA3357376.1"
                     /translation="MPVFALLALVAYSFSLALIVPGLLQKNSGWRRMAILSAVIALVC
                     HAVALESRILPGGDSGQNLSLLNVGSLVSLMICTVMTIVASRNRGWLLLPIVYAFALI
                     NLAFATFMPNEYITHLEATPGMMVHIGLSLFSYATLIIAALYALQLAWIDYQLKNKKL
                     AFSNEMPPLMSIERKMFHITQIGVVLLTLTLCTGLFYMHNLFSTENIDKAVLSIVAWF
                     VYIVLLWGHYHEGWRGRRVVWFNVAGAGILTLAYFGSRILQQFVS"
     gene            9355..10716
                     /gene="ffh"
                     /locus_tag="MOX77_001832"
     CDS             9355..10716
                     /gene="ffh"
                     /locus_tag="MOX77_001832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HCA3357377.1"
                     /translation="MFDNLTDRLSRTLRNISGRGRLTEDNVKETLREVRMALLEADVA
                     LPVVREFINRVKEKAVGHEVNKSLTPGQEFVKIVRSELVAAMGEENQTLNLAAQPPAV
                     VLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFF
                     PSDVGQKPVDIVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEIKQVHASIKPVETL
                     FVVDAMTGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVG
                     EKTDALEPFHPDRIASRILGMGDVLSLIEDIESKVDRAQAEKLATKLKKGDGFDLNDF
                     LEQLKQMKNMGGMASLMGKLPGMGQIPDNVKSQMDDKVLVRMEAIINSMTLKERAKPE
                     IIKGSRKRRIAQGCGMQVQDVNRLLKQFDDMQRMMKKMKKGGMAKMMRSMKGMMPPGF
                     PGR"
     gene            11060..11308
                     /gene="rpsP"
                     /locus_tag="MOX77_001833"
     CDS             11060..11308
                     /gene="rpsP"
                     /locus_tag="MOX77_001833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000256453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HCA3357378.1"
                     /translation="MVTIRLARHGAKKRPFYQVVVTDSRNARNGRFIERVGFFNPIAS
                     EKEEGTRLDLDRIAHWVGQGATISDRVAALIKEVKKAA"
     gene            11327..11875
                     /gene="rimM"
                     /locus_tag="MOX77_001834"
     CDS             11327..11875
                     /gene="rimM"
                     /locus_tag="MOX77_001834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000043333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HCA3357379.1"
                     /translation="MSKQLAAQVPAEPVVLGKMGSSYGIRGWLRVFSSTEDAESIFDY
                     QPWFIQKAGQWQQVQLESWKHHNQDLIIKLKGVDDRDAANLLTNCEIVVDSSQLPALE
                     EGDYYWKDLMGCQVVTAEGYDLGKVIDMMETGSNDVLVIKANLKDAFGIKERLVPFLD
                     GQVIKKVDLATRTIEVDWDPGF"
     gene            11920..12687
                     /gene="trmD"
                     /locus_tag="MOX77_001835"
     CDS             11920..12687
                     /gene="trmD"
                     /locus_tag="MOX77_001835"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HCA3357380.1"
                     /translation="MFIGIVSLFPEMFRAITDYGVTGRAVKKGLLNIQSWSPRDFAHD
                     RHRTVDDRPYGGGPGMLMMVQPLRDAIHAAKAAAGEGAKVIYLSPQGRKLDQAGVSEL
                     ATNQKLILVCGRYEGVDERVIQAEIDEEWSIGDYVLSGGELPAMTLIDSVARFIPGVL
                     GHEASAIEDSFADGLLDCPHYTRPEVLEGMEVPPVLLSGNHAEIRRWRLKQSLGRTWL
                     RRPELLENLALTEEQARLLAEFKTEHAQQQHKHDGMA"
     gene            12728..13075
                     /gene="rplS"
                     /locus_tag="MOX77_001836"
     CDS             12728..13075
                     /gene="rplS"
                     /locus_tag="MOX77_001836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012768745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HCA3357381.1"
                     /translation="MSNIIKQLEQEQMKQNVPSFRPGDTVEVKVWVVEGTKKRLQAFE
                     GVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSIAVKRRGAVRKAKLYYLRE
                     RTGKAARIKERLN"
     gene            complement(13232..14452)
                     /gene="dgcN"
                     /locus_tag="MOX77_001837"
     CDS             complement(13232..14452)
                     /gene="dgcN"
                     /locus_tag="MOX77_001837"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase DgcN"
                     /protein_id="HCA3357382.1"
                     /translation="MNKEFSLSRPTFKRTLRRISIISVLLTMTLIWLLICVASVLTLK
                     QYAQKNLDLTAATMAHSLEAALVFSDSAAAAETLATLGRQGQFSAAEVRDKNGRTIAS
                     WRYDARAADDKLIGLISHWLFPLPVSQPVWHNGRAIGEVRLVARDSLIGHFIWLSLAV
                     LTGCILLASGIALLLTRYLHNGVVDALQNITEIVHDVRTNRNFSRRVPDERIAEFHLF
                     AQDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSCINALMKDNSARS
                     SSALLFLDGDNFKYINDTWGHAAGDRVLIEVAKRLAEFGGSRYQTYRLGGDEFAMVLY
                     GVHSEYEVQRICAALSQAFNRPFELHNGQRITMTLSIGFALTWEHATAEKLQELADRN
                     MYQAKHRRAERSLN"
     gene            complement(14445..14963)
                     /locus_tag="MOX77_001838"
     CDS             complement(14445..14963)
                     /locus_tag="MOX77_001838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfiR family protein"
                     /protein_id="HCA3357383.1"
                     /translation="MRFSHRFILLLSLLLASLPLYAQCVTEEEKSVRAIVSGIVSYTH
                     WPALSGPPRLCIFSSARFVRVLSEEANWAFPYQPLVIRTTQEALSARCDGFYFGNESP
                     AYQVELTRHYPVNALLLIAEQNTECIIGSAFCLIINNDEVKFSVNLDSLSHSGVRVNP
                     EVLMLARNQKHE"
     gene            15403..16473
                     /gene="aroF"
                     /locus_tag="MOX77_001839"
     CDS             15403..16473
                     /gene="aroF"
                     /locus_tag="MOX77_001839"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroF"
                     /protein_id="HCA3357384.1"
                     /translation="MQKDALNNVRITDEQVLMTPEQLKAAFPLSLAQEAQIAQSRGII
                     SDIIAGRDPRLLVVCGPCSIHDPETALEYARRFKALAAEVSDSLYLVMRVYFEKPRTT
                     VGWKGLINDPHMDGSFDVEAGLKIARQLLVELVNMGLPLATEALDPNSPQYLGDLFSW
                     SAIGARTTESQTHREMASGLSMPVGFKNGTDGSLATAINAMRAAAQPHRFVGINQAGQ
                     VALLQTQGNPHGHVILRGGKAPNYSPADVAQCEKEMEQAGLRPSLMVDCSHGNSNKDY
                     RRQPAVAESVVAQIKDGNRSIIGLMIESNIHEGNQSSEQPRSEMKYGVSVTDACISWE
                     MTDALLREIHKDLSGQLAVRVA"
     gene            16483..17604
                     /gene="tyrA"
                     /locus_tag="MOX77_001840"
     CDS             16483..17604
                     /gene="tyrA"
                     /locus_tag="MOX77_001840"
                     /EC_number="1.3.1.12"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional chorismate mutase/prephenate
                     dehydrogenase"
                     /protein_id="HCA3357385.1"
                     /translation="MVAELTALRDQIDDVDKALLNLLAKRLELVAKVGEVKSRFGLPI
                     YVPEREASMLASRRAEAEAIGVPPDLIEDVLRRVMRESYSSENDKGFKTLCPSLRPVV
                     IVGGGGQMGRLFEKMLTLSGYQVRILEQQDWPRARDIVADAGMVIVSVPIHVTEQVIA
                     QLPPLPSDCILVDLASVKSGPLQAMLAAHDGPVLGLHPMFGPDSGSLAKQVVVWCDGR
                     QPEAYQWFLEQIQVWGARLHRISAVEHDQNMAFIQALRHFATFAYGLHLAEENVQLEQ
                     LLALSSPIYRLELAMVGRLFAQDPQLYADIIMSSERNLALIKRYYKRFGDAIGLLEQG
                     DKQAFIDSFRKVEHWFGDYARRFQNESRVLLRQANDSRP"
     gene            17662..18570
                     /locus_tag="MOX77_001841"
     CDS             17662..18570
                     /locus_tag="MOX77_001841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HCA3357386.1"
                     /translation="MTTPHLLFDYVGHLPECPTWSEDESALYWTDILEQEIYRYHPAS
                     GTHSVLAFPEEVGCFALREQGGFIVAMRHAIWLADKNGLLQRKVCDNPSNTKLARFND
                     GGTDGDGRFYAGTFWAPGDYNGALLMRIDHDLTAKVIQCGIQGHNGLAFSPDNQWMYT
                     SDTPNGVIYRTLLDKHGEPGKRELFRHFGEGEGLPDGAAMDSEGCYWSAMFDGWRVAR
                     FSPQGEQLEEYRLPVRCPTMVCFGGADMKTLFITTTRENMSAQEVADYPLSGAIFTLQ
                     VAVAGMKKSRFIERQAGSTGTTFSLG"
     gene            complement(18531..19691)
                     /gene="pheA"
                     /locus_tag="MOX77_001842"
     CDS             complement(18531..19691)
                     /gene="pheA"
                     /locus_tag="MOX77_001842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional chorismate mutase/prephenate
                     dehydratase"
                     /protein_id="HCA3357387.1"
                     /translation="MTSENPLLALRDKISALDEELLALLAKRRALAIEVGQAKLLSHR
                     PVRDIDRERALLDRLIHLGKAHHLDAHYITRLFQLIIEDSVLTQQALLQQHLNNTHPH
                     SARIAFLGPKGSYSHLAARQYAARHFEQFIESGCAKFTDIFHQVETGQADYAVVPIEN
                     TNSGAINDVYDLLQHTSLSIVGEMTVTIDHCVLVSGATDLNTIETVYSHPQPFQQCSK
                     FLSRYPHWKIDYTESTSAAMEKVAQANSPRVAALGSEAGGMLHGLQVLERIAANQTQN
                     ITRFLVLARKAINVSDQVPAKTTLLIATGQQAGALVEALLVLRNHNLIMTKLESRPIH
                     GNPWEEMFYLDIQANLESQVMQSALKELGEITRSMKVLGCYPSENVVPVEPA"
     misc_feature    complement(19714..19839)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01859"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Phe leader region; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF01859"
     gene            complement(19791..19838)
                     /gene="pheL"
                     /locus_tag="MOX77_001843"
     CDS             complement(19791..19838)
                     /gene="pheL"
                     /locus_tag="MOX77_001843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_449055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pheA operon leader peptide PheL"
                     /protein_id="HCA3357388.1"
                     /translation="MKLTRFFFAFFFIFP"
     gene            complement(19942..20280)
                     /gene="raiA"
                     /locus_tag="MOX77_001844"
     CDS             complement(19942..20280)
                     /gene="raiA"
                     /locus_tag="MOX77_001844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated translation inhibitor RaiA"
                     /protein_id="HCA3357389.1"
                     /translation="MTMNITSKQMEITPAIRQHVADRLAKLEKWQTHLINPHIILSKE
                     PQGFIADATINTPNGHLVASAKHEDMYTAINELINKLERQLNKVQHKGEARRATASVK
                     DASFVEAEEE"
     gene            complement(20552..21289)
                     /gene="bamD"
                     /locus_tag="MOX77_001845"
     CDS             complement(20552..21289)
                     /gene="bamD"
                     /locus_tag="MOX77_001845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HCA3357390.1"
                     /translation="MTRMKYLVAAATLSLFLAGCSGSKEEVPDNPPNEIYATAQQKLQ
                     DGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTH
                     PNIDYVMYMRGLTNMALDDSVLQGFFGVDRSDRDPQHARAAFNDFSKLVRSYPNSQYT
                     TDATKRLVFLKDRLAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATRDALPLM
                     ENAYRQMQLNAQADKVAKIIAANSKNT"
     gene            21421..22401
                     /gene="rluD"
                     /locus_tag="MOX77_001846"
     CDS             21421..22401
                     /gene="rluD"
                     /locus_tag="MOX77_001846"
                     /EC_number="5.4.99.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017383977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(1911/1915/1917) synthase
                     RluD"
                     /protein_id="HCA3357391.1"
                     /translation="MAQRVQLTATVSENQLGQRLDQALAEMFPDYSRSRIKEWILNQR
                     VLVNGQLCDKPKEKVLGGERVAIDAEIDEEIRFEAQDIPLDIVYEDDDILVINKPRDL
                     VVHPGAGNPDGTVLNALLHYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVE
                     SLQLREITREYEAVAIGHMTAGGTVNEPISRHPTKRTHMSVHPMGKPAVTHYRIMEHF
                     RVHTRLRLRLETGRTHQIRVHMAHITHPLVGDQVYGGRPRPPKGASEEFISTLRKFDR
                     QALHATMLRLYHPVSGIEMEWHAPIPQDMVDLIDAMRADFEDHKDDVDWL"
     gene            22398..23129
                     /gene="pgeF"
                     /locus_tag="MOX77_001847"
     CDS             22398..23129
                     /gene="pgeF"
                     /locus_tag="MOX77_001847"
                     /EC_number="1.10.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphenol oxidase"
                     /protein_id="HCA3357392.1"
                     /translation="MNALIVPQWPLPKGVAACSSTRIGGVSLSPYDSLNLGAHCGDNP
                     EHVEENRKRLFAAGNLPSKPVWLEQVHGKNVLRLTGEPYASKRADASYSNTPGTVCAV
                     MTADCLPVLFCNREGTEVAAAHAGWRGLCEGVLEETVTCFADKPENIIAWLGPAIGPA
                     AFEVGPEVRDAFLAKDAQADSAFLPHGEKFLADIYQLARQRLANTGVEHVYGGDRCTF
                     SESETFFSYRRDKTTGRMASFIWLI"
     gene            23259..25832
                     /gene="clpB"
                     /locus_tag="MOX77_001848"
     CDS             23259..25832
                     /gene="clpB"
                     /locus_tag="MOX77_001848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002461515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HCA3357393.1"
                     /translation="MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGG
                     SIRPLLTSAGINAGQLRTAIDQALSRLPQVEGTGGDVQPSSELVRVLNLCDKLAQKRG
                     DNFISSELFVLAALESRGTLTDLLKSAGATTANITQAIEQMRGGESVNDQGAEDQRQA
                     LKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEG
                     LAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILF
                     IDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ
                     KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAID
                     LIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELDD
                     KERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPE
                     LEKQLEAATQSEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMLEGEREKLLRMEQEL
                     HSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFD
                     SDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKA
                     HPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGRMKEM
                     VLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDE
                     ALKLLSANGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEANDDRIVAV
                     Q"
     gene            26288..>26372
                     /locus_tag="MOX77_001849"
     rRNA            26288..>26372
                     /locus_tag="MOX77_001849"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT         6479 a         6292 c         7088 g         6513 t
ORIGIN      
        1 gcgccggaag tgaccagcag ctcattaata tcagcgattt gttcaaaatg tagcccggct
       61 tgcggatttt ccacccacca taacgtgcca tcgttttccg ccagtaccag ctggcttgcg
      121 cccagatcgt tggtaacgta aaagttttta atcgtgatcg tttcgccgga atggagcctc
      181 accaccagat cctgattaat gcgcgtaagt tgactaattt catcccgggc cactgataat
      241 ttaacaattg aaggcgcgtt aagagtgacc gctgaggatt ccagagtggt ggagacgcca
      301 gtcaatttcg aaaccacggc gagtagacgc ataaattagc tcctgatgga tttgctctgt
      361 gtattaatta acgggcacga cgttcagggc aaaatgcgta gacgagcctt cccgtttatc
      421 gtgagagatg aatttccgta gccatattct tttttatgag cgtaggtgaa ggtctggttt
      481 tctcgtcgaa taaccatttg ttttttgtgc ctgactagtg ctttcgtatt agatgatata
      541 gtcagaaaaa aatctttctg caaattaaga tctattgata aaggtgttag tgcgtctgaa
      601 atataacgga gtttgtgtta aggagaggta gggtgggcta acaatgcatg ataatttttt
      661 atttatcttt atgttttata atgaatttta attttttctt ctttttctct tttaacataa
      721 aaacaatact ttttgtgaag gtattcagca atattaaatt ttataaaaat catttgaagt
      781 attgtgttat taggctataa aaatttttta aacaaagaat atattcttgt tgtggtgtgg
      841 tatttattgc tattgataag cgtcagacac agagaatata ttttcgaggc atgcatgaga
      901 tatgaacatt gaccagcttc atactgagaa gctggtcaca aaaaatgtct attatcggcc
      961 tgcatttttc ataatgcgtg ctttatccag ttgccactca cgttctttaa gatcggaacg
     1021 tttatcatgt tgttttttac ctttcgccac gccgatcttc actttgcacc aggcattttt
     1081 ccagtacaga gaaagcgcga cgacagtata accttcacga ttaatacggc catacagcga
     1141 atcaagctca cgctgattta acaacagttt gcgggttcgg gttgggtcgc atacgacatg
     1201 tgtcgaggcg accgccatcg gcgtaaagtt tgcgccaaac agccaggcct cgccatcttt
     1261 gaggataacg taactgtcgc cgatattggc ttttcctgcg cgcagagatt ttacttccca
     1321 gccttgcagg gcgagaccag cctcgaactc ttcttcgata aagtattcgt gccgggcgcg
     1381 cttattcagc gcgatggtgg ctgagcccgg tttatgtgct tttttcttcg tcataagtgt
     1441 cgtgaattca taggtaatct gatatcgaaa acaccccatt acgtcctgat gaggtgcaaa
     1501 aatctatctt agcatgagtt gggctatgca cgcacaatta aggcatgacg gttggggaca
     1561 gcattttttt tactcgctga taagtggtat tatttacacg atttatgttg atgggaattg
     1621 ctatgcctca gattagtcgg actgctttag tcccctacag tgcggaacag atgtatcagt
     1681 tagtgaatga cgtgcaatcg tatccccagt ttttgcctgg gtgtgttggc agtcgtgtcc
     1741 tggagtcatc gccagcacag atgacggcgg ctgttgacgt gtcgaaggcg ggtatcagca
     1801 agacgtttac gacgcgtaat cagctaacgc gtaaccagag tattctgatg catctggtgg
     1861 atggcccctt taaaaagctg atcggcggct ggaaatttac cccgctcagc cccgaggcgt
     1921 gccgcattga gtttcagctt gattttgagt ttaccaataa actcattgag ctggcgtttg
     1981 gtcgtatatt caaagagtta gcgtccaaca tggtgcaggc gtttacggtt cgcgccaaag
     2041 aggtttaccg tgccggataa acttgtggtt gaagtggctt atgcgctgcc ggaaaagcag
     2101 tatttgcagc gcgtaacgct ggaggagggc gcgacggtcg aagaggcgat tcgcgcttcc
     2161 ggcttgctgg aattgcgcac ggatatcgat ctggcgaaaa ataaagtagg tatctacagt
     2221 cgtccggtaa aactcaccga tacggtgcag gatggcgatc gggttgaaat ttaccgtccc
     2281 ttaatcgccg atccaaaagc attacgccgc cagcgtgccg aaaaatcggc tggcagataa
     2341 ttagcctctt ttgccggata acggtgtgaa agccgtacca cacctgaagc acaggcgtgc
     2401 ctgtaagcca gataaacgta gcgccatcag gcaaattcgt accaaatggc gggggagagg
     2461 tttgcaggcc tgatgaacgt aacctcatca ggcggtatca caaaattact tcgtcaacgc
     2521 cggtttgtta tcaatattgg ttaacacgcc gctgctgtta aaggtgagcg tcagagtctg
     2581 ctgcgtcacg ttctcatgtc ctggctgctg gcggaagaca taaaaccagg tgttcgtacc
     2641 aaaaggatcg gtcatcatcg gcgtgcctaa agcatacgca acctgttgtt gcgtcatacc
     2701 aacacgcact ttggcgacat ccgtaggtgt aagatagttc ccctgattga tgtcaggtcg
     2761 gtaaaccact cgctccagag tggaacagcc tgcggtcaac atcaggagta ctgctgcggc
     2821 agcagtcagc gttttacagc gcatagtgat tgggttcctt ttcgggcctg agcagtacgt
     2881 ggctcatatt aatatgccga tgataataga cctttcatca ctttaaaacc ttttgctgtc
     2941 gggtcttacg gcgtttttgt tgtgaactca gaccttcggg agataaaaaa gtttacgccg
     3001 ccagcagttc ttttgcgttt gccagcgtat tacgcgtaac ttcacttcct cccaacaggc
     3061 gggccagttc ctgtaaacgc gcacgtttat ccaaaggttg catatgggtt tcggtcattg
     3121 ccccgtctgt ttctttactg acaaagaagt gctggtgacc gcacccggct acctgtggta
     3181 ggtgagtgac gcacatcacc tgagtggatt cgccaagctg acgcaggagt ttaccgacca
     3241 cggcggcggt tgggccgctg atgccaacat caacctcgtc aaaaattagc gccggcgttt
     3301 ccattttgcg cgcggtaatc acctgaatag ccagcgcaat gcgcgacagt tcaccgccag
     3361 acgcgacttt agcgataggc tgcagcggct gacccgggtt tgtcgtcact ttaaactcca
     3421 cgcgatcggc gccgtcgttg ctcagatgat gctcatcaaa tttcacgtcg atagtaaaca
     3481 gaccgtgcgg catcgaaagt aaatgcatac tttcagtgat caactgcccc agctcctggg
     3541 cgtaaaactg acgctgttga tgcagcgctt gcgccgtttc cagcgcttgt tggtgatgct
     3601 tattaaccgc cagcgtcagc gtttccagcg aatcggcctg atcgtcgagc tgctgctgtt
     3661 cttcgagcag tgactgataa agctgcggca gcgcttccgg gctgacgtga tgttttcgcg
     3721 ccagcgaaat ttgtttagcg atgcgctgtt caagctcaaa caggcgattg gggtctaaat
     3781 ccagacgctc gcaatagtgg cgtaattcat cgctggcttc ggtgagttgg atagtggctt
     3841 cttccagcat atccaggatg ccggaaagct tgctgtccat acccaccagc tcgctaacca
     3901 gttgttttgc gctatataac tggctttgca ggttaacgtc ttcgccgtcc gcgagtagcg
     3961 ccagagcgtt ctggctggtc gtaagcaact gcccgctgtt ggccagccgt ttgtactctt
     4021 cgtcaatttg ctcgaattcg ccggcctgcg gattaaagtc gttcaactct tttaactgat
     4081 attgcagcag ttccgcgcgc gcggcgcgtt cctgactttg ttgctggtga tgggcgagat
     4141 cgcggcagct ttgatgccat aattggtagt gggcagccat ctgctgcgct aaagcggctt
     4201 cgttggcata gctatccagc agcgattttt gctgttcggg tttggtcagc tgctggtgcg
     4261 tatgttgacc atgaatttga atcagcaact gaccgagctc gcgcaattga gataggggca
     4321 cagcggtgcc gttaataaag ccccgtgagc ggccatcgct gctgataacg cggcgaagta
     4381 agcattcgcg accttcttca agctggtttt cttccagcca gcgcaatgcc gcaggcgtgt
     4441 ctttcagcgc aaagcgggca cacaaatcgg cgcgggtcgc tccggtacgg accatatcgg
     4501 cctcagcgcg accgcccaga cacagaccca gggcatcaat cgcaatagat ttacccgcgc
     4561 cggtttcacc agtaatgacg gtcattccgc tctgaaaatc gatctcaagc tcacgaacga
     4621 tagcaaaatt gctgatggtc agttgcgcca acatagctgt tttcctgtat gaaaaaccat
     4681 gactgtaatt aaatacagta taaactggtt ttttatacag taaagaggct aacgtaaaat
     4741 tagaataatt tttttgacca gccgagtttt gtgcttaatg tattgaaata gctatagtct
     4801 ttgggatgta tcaggttgag atggtagtcg cagcggcgaa tcagcacatc ttctccttcc
     4861 tgaataggca gcgctatctg actgtcgcag ctaatttcca gatcgctacg gcgatgcgaa
     4921 aaacgcagac gaatcgtgct actgctgtta atgactaacg ggcgcgccga caaggtatgc
     4981 gggaacatcg gcaccagggt gatggcatcc agtgaagggg tcagaatagg gccgcctgcg
     5041 gagagcgaat aggcggtgga gccggtcggc gtagaaatga tcagaccatc agatcgctgt
     5101 gaaaaagcga aggtttcatc aatataaacc tcgaattcga tcatatgcgc cacttttccc
     5161 ggatgcagca ccacttcatt aatggctgtg ctgatacgct tctggcggtc ctgttggcag
     5221 acctgcgctt ccagcagaaa acgtttttcg gagatatagc gtccttccag cacatccgat
     5281 aattgttgca gggcgttgtc cggatcgaga tcggtcagga agccaagatt accgcggtta
     5341 atgccaatca cattgatgtc ataacgcgcc agcgtacgcg ctgcgccaag catattgccg
     5401 tcgccgccca caactaccgc cagatccgcc tgttgaccaa tttccgccag cgtgccggtt
     5461 ggcacatttt ttagctgtaa ttcgtgggcg atttgttgct ccacaatgac ctcataaccc
     5521 tgatcgcata gccaacggta gagcatttca tgtgtcgtga gtgcggtggg atgacgcgga
     5581 tgccccacaa tgccgataca cttgaaatga ttattcattt ttctgaggtc cttgtagcga
     5641 agattgatga caatgtgagt acttcccttg aaaccctgaa tctgatcccc ataataagcg
     5701 aagttagcga gatgaatgcg aaaaaaaacg cggagaaatt catgagtagt aaagaacaga
     5761 aaacgcctga ggggcaagcc ccggaagaaa ttatcatgga tcagcacgaa gaggttgagg
     5821 cagttgaacc aaacgattct gctgagcagg tggatccgcg cgatgaaaaa attgcgaatc
     5881 tggaagttca gcttgccgaa gcccagactc gcgaacgcga caccgtgttg cgtatcaaag
     5941 cggaaatgga aaacctgcgc cgccgtactg aacaggatat cgaaaaagcg cataaattcg
     6001 ctctcgagaa gttcgtcaac gaattgctgc cggtaatcga tagcctggat cgcgcgctgg
     6061 aagtcgcaga caaagccaat ccggatatgg cggcaatggt cgaagggatt gagctgacgc
     6121 tgaagtctat gctggatgtg gtgcgtaagt tcggcgtgga agtgattgct gagaccaacg
     6181 tgccgctgga cccgaacgtg catcaggcga ttgcgatggt ggaatcggaa gaggttccgg
     6241 caggcaatgt gctgggtatt atgcagaaag gctacacgct gaacggtcgt accattcgcg
     6301 cggcgatggt gactgtagcg aaggcgaagt aaaagtctaa tggccgatgt aaagtcggcc
     6361 atttttttag cttaaaaaat cctgcacttc cagccacggc gtgttgaaat cctctatttt
     6421 ttatattcgc tcattggcag aacgaccaca ttataggtgt cagatccttc attcagatca
     6481 aaaatctgga agcccctctt attgagttcg gtctggatgc gttcaaagat ctcgtcaagg
     6541 taacggtccc cggcttcaca gacatcggag atttcatcct cttgggttat ttcgacaaga
     6601 agatttctta attcctcaga atccgtcagg ttttttgtga gttcataaaa gcgatctgcg
     6661 gcaaaattag ccagttcgcc ttcttcatct tcacctttcc agtcaacgag gtgaataaat
     6721 ccttcgccgc gtagaacttg taaaaatgcc tgtgccagct cgttatttcc gagatcgcca
     6781 ccgctacaat ccaggacgtc ttgcaaccca tattcgtctt catcttcgtc ttcaaagatt
     6841 tcaggttgcg tcgaaagttg agagaaaata gtgggccata aggttgggtt gtgcgataaa
     6901 aaaacgttgg cgacgacgtt gaggtcgtct gcaaaattct tatcccattc aattacataa
     6961 tcttctgaca taacatcaat atcctttctg aatgcctgaa aagacattat tgcattgtta
     7021 agtaaatggc aggaattgat ggaatcttaa aagacggcga taaaaaaggc gaaccggagt
     7081 tcgccattgt gttactccgc cacactctcg cgcagcggtt ttaccggtac aacctttacc
     7141 tgcttaatca tattttcctg tacatcgaga atatcgatat cgtactgctc aatgcgcacg
     7201 cgcgtgccag caaccggaat ttcctccagc gcctccagaa tcaccccgtt gacggtgcgc
     7261 gcgtcatctt ccggcaggtg ccagttaaac gctttattga tttcccggac gttggcggta
     7321 ccgtcaataa tgaccgaacc gtcgttttgc ggcgtgacct cttccgccag tgtcggcgac
     7381 atcgatgtgg tgaagtcgcc aacgatctcc tcgagaatat cttccacggt gaccagcccc
     7441 tggatatcgc catattcgtt gacgaccagt ccgactttct ttttattgcg ctgaaattta
     7501 atcagttgcg tactgagcgg cgtaccttcc gggacgtaat agatttcatc ggcggcgcgc
     7561 agcatcatct ctttggtgaa ctcttttttc tcggccatta accgccaggc ttcacgcacg
     7621 cgcagcatac tgatggcgtc atccagcgaa tcgcgataga gcacaatgcg tccgtgcggc
     7681 gagtgggtga gctgccgctc gatagacttc cagtcgtcat tgatatcgat cccgataatt
     7741 tcattacgcg gcaccatgat gtcatccacg ctgacctttt ccagatcgag aaccgacagc
     7801 agcatatcct gattgcggcg agagatttgc gaacgggatt catgcacgat agtgcgtaat
     7861 tcctctttgc ttaacgaccc gctgaccacg atgtccgttt taattcccat cagacgcatc
     7921 agcaggcggg tgatggtgtt aagtaaccac accagcggca tcatcagtat ctgtaacggc
     7981 gccagcagga agctgctggg ataggccact ttttccggat agagcgcggc gatagttttg
     8041 ggcaggactt cggcaaaaac taacacgaca aacgtcagta ccccggtggc gatagccacg
     8101 ccggcatcgc cgtaaagccg catacccaca atcgtgccga gcgccgaggc aagaatgttg
     8161 accaggttat tgccaatcag caccaggctt atcagtcggt cgggtttacg cagtaatttt
     8221 tctacccgtt ttgccgagcg attaccttgc ttcgccatat ggcgtaaacg gtaacggttt
     8281 agcgtcatca ttccagtttc ggaaccggaa aaataggccg agatgaccac catgatgatt
     8341 aatatgataa tcagcgtggt ggtggagatg tgttccaggg gaaactcctt taaaagctta
     8401 gcttacaaat tgctgtaata tgcggctacc aaaataggcc agcgtcagaa tacccgcgcc
     8461 tgcgacgtta aaccacacga cccgacgacc ccgccagcct tcatggtaat gcccccacag
     8521 cagaacgata tagacaaacc atgccacgat agagagcacg gctttatcaa tattttcagt
     8581 actgaacagg ttatgcatgt aaaacaggcc ggtacacaga gtaagggtca gcagtacgac
     8641 gccaatctgc gtgatatgaa acattttgcg ctcaatgctc atcaatggcg gcatttcatt
     8701 actaaacgcc agctttttgt tcttcaactg atagtcgatc cacgccagtt gtagcgcata
     8761 cagcgcggcg attatcagcg tcgcgtaaga gaaaagcgac agaccgatgt gcaccatcat
     8821 gcctggggtc gcttccagat gcgtaatata ttcattaggc atgaacgtgg cgaaggccag
     8881 gttaatcagc gcaaaagcat agacaatggg cagaagtagc cagccgcgat tacgcgacgc
     8941 gacaatggtc atcaccgtgc agatcatcag gctgaccagc gaaccgacat tcagcaggct
     9001 caggttttgt ccactgtcgc cgccgggcag aatacgcgat tccagcgcga cagcatggca
     9061 caccagcgcg atgaccgcag aaagaatagc catacgccgc cagccgctgt ttttttgcaa
     9121 cagtccggga acgatcagcg cgaggctgaa ggagtaggcg acaagggcaa gtaaagcaaa
     9181 aacgggcata gttgtgtcga cagttgacca gtgagaaaga gaagcagtat agcgttacgt
     9241 gaccgcagct ccaaccgttg cataacaaca aagacggctt catggtatac tgtggcgaaa
     9301 ttctgtaact gtgtcgctgc ggcgaccaac cgtttccacc ccaggcgaga gacaatgttt
     9361 gataatttaa ccgatcgttt gtcgcgcacg ctgcgcaata tcagtggccg tgggcgcctt
     9421 actgaagaca acgttaaaga gacgctgcgc gaagtgcgca tggcgctgct ggaggctgac
     9481 gttgcgctgc cggtagtgcg tgagttcatc aatcgcgtaa aagagaaagc ggttggtcat
     9541 gaagttaaca aaagcctgac cccagggcag gagttcgtca agattgtccg tagcgaactg
     9601 gttgcggcaa tgggcgaaga aaaccagacc ctgaatctgg ctgcgcagcc gccagccgta
     9661 gtattgatgg cgggtctgca gggggcgggt aaaaccacca gcgtcggtaa gttgggtaaa
     9721 ttcttgcgcg agaagcacaa gaagaaagtg ctggtcgtct ctgccgacgt ctatcgcccg
     9781 gcggcgatca aacagctcga aacgctggct gagcaggttg gcgtggattt cttcccgtct
     9841 gatgtcggcc agaaaccggt tgatatcgtc aacgccgcgc tgaaagaagc gaagctcaaa
     9901 ttctacgacg tgctgctggt ggataccgcc ggtcgtctgc acgttgacga agcgatgatg
     9961 gacgaaatca aacaggtcca cgcttctatc aagccagtag aaacgctgtt tgtcgtcgat
    10021 gcgatgaccg gtcaggatgc ggcgaatacc gcaaaagcct ttaacgaagc gctgccgtta
    10081 accggtgtgg tgctgaccaa agttgatggt gatgcgcgtg gcggtgcggc gctctctatt
    10141 cgtcatatca ccggcaagcc gattaaattc ctcggtgtcg gcgagaaaac cgacgcgctg
    10201 gagccgttcc acccggatcg tatcgcctcg cgtattctcg gcatgggcga cgtactgtct
    10261 cttatcgaag atatcgaaag caaagttgac cgcgcacagg ctgagaagct ggcgaccaaa
    10321 ctgaagaaag gcgacggttt cgacctgaac gacttcctgg agcagctcaa acagatgaaa
    10381 aacatgggcg gtatggccag tctgatgggc aaattaccgg gcatggggca gattccggac
    10441 aacgttaaat cgcagatgga tgataaggtg ctggtgcgta tggaggcgat catcaattcg
    10501 atgacgctga aagaacgcgc gaagccggaa atcattaaag gttcccgcaa gcgtcgtatc
    10561 gcgcagggct gtgggatgca ggtgcaggac gttaaccgcc ttctgaaaca gttcgacgac
    10621 atgcagcgca tgatgaagaa aatgaagaag ggcgggatgg cgaagatgat gcggagtatg
    10681 aaggggatga tgccgcctgg ttttccaggc cgctaatttc ccggctaggc tcacttgcta
    10741 tttcggcacc ggggtgtgct agccatcctc acgtactgcg tggccgctaa aacaagggta
    10801 taaggctatc ttgtttgcca ttttagcccc ggggtgtgct cgaaatgctc acgtactgcg
    10861 tgtacgctcc gctttctgcg cgcacgccgg agctaaactg gctgcaccga tatacgcctt
    10921 ttatcccttg tttcgtgttc agtagcaaga tgctgattgc attttcccca gaaatcagta
    10981 aaattttcgg gcttttaata tgacgccggg ctccgttcct cgatgaggcc cggttgtttt
    11041 attcacacaa gaggatgtta tggtaactat tcgtttagct cgtcacggcg ctaaaaagcg
    11101 tccgttctac caggttgttg tcaccgacag ccgtaatgca cgcaacggtc gcttcattga
    11161 gcgcgttggt ttcttcaacc caatcgctag cgaaaaagaa gaaggcaccc gcctggatct
    11221 ggatcgcatc gctcactggg ttggccaggg cgcaaccatt tccgatcgcg ttgcggcgct
    11281 gatcaaagaa gtaaaaaaag cagcttaatc tgtcacggtg gtcatgatga gcaagcaact
    11341 cgccgcacaa gtacccgctg aaccggttgt actggggaaa atgggttctt catacggtat
    11401 ccgtggttgg ctcagagtgt tttcctccac tgaagacgcc gaaagcattt ttgactatca
    11461 gccctggttt atccagaagg cgggtcagtg gcagcaggta cagctggaaa gctggaagca
    11521 ccacaatcag gatctgatca tcaagctgaa aggcgttgac gatcgagatg ccgcgaatct
    11581 tctgaccaat tgcgaaattg tcgtggattc ctcgcaactt cctgcgcttg aggagggaga
    11641 ctactactgg aaagacctga tgggttgcca ggtagtcacc gctgaaggct acgatctcgg
    11701 taaagttatc gacatgatgg aaaccgggtc gaatgacgtt ctcgtcatta aggcgaacct
    11761 gaaagatgca tttggtatca aggaacgact agtaccgttc ctcgatgggc aggttatcaa
    11821 gaaagtcgat ctcgctactc gtactatcga agtagactgg gatcctggtt tttaaaccac
    11881 cggataaacg gtaataaatg gcgttatggg gattggcttg tgtttattgg catcgttagc
    11941 ctgtttcctg aaatgttccg cgcaattacc gattacgggg taactggccg ggcagtaaaa
    12001 aaaggcctgc tgaacatcca aagctggagt cctcgcgact tcgcgcatga ccggcaccgt
    12061 accgtggacg accgtcctta cggcggcgga ccggggatgt taatgatggt gcaacccttg
    12121 cgggacgcca ttcatgcagc aaaagccgcg gcaggtgaag gcgctaaagt gatttatctg
    12181 tcgcctcagg gacgcaagct tgatcaagcg ggcgttagcg agctggccac gaatcagaaa
    12241 ctcattctgg tgtgtggtcg ctacgaaggc gtagatgagc gcgtaattca ggccgaaatt
    12301 gacgaagaat ggtcaattgg cgattacgtt ctcagcggtg gcgaactacc ggcaatgacg
    12361 ctgattgact ccgtcgcccg gtttataccg ggggttctgg ggcatgaggc atcagcaatc
    12421 gaagattcgt ttgctgatgg gttgctggat tgtccgcact atacgcgccc tgaagtgtta
    12481 gaggggatgg aagtaccgcc agtattgctg tcgggaaacc atgctgagat acgtcgctgg
    12541 cgtttgaaac agtcactggg ccgaacctgg cttagaagac ctgaacttct ggaaaacctg
    12601 gctctgactg aagagcaagc aaggttgctg gcggagttca aaacagaaca cgcacaacag
    12661 cagcataaac atgatgggat ggcataggcc cccgaatatc agtttaccca ggataagaga
    12721 ttaaattatg agcaacatta ttaagcaact tgaacaagag cagatgaagc agaacgtacc
    12781 ttccttccgt ccgggcgata ccgtggaagt gaaagtatgg gttgttgaag gtaccaagaa
    12841 acgtctgcag gcattcgagg gcgtggttat cgctattcgt aaccgcggtc tgcactctgc
    12901 attcactgtt cgtaaaattt ccaacggcga aggcgttgag cgtgtcttcc agactcactc
    12961 tccggtagtt gacagcattg ctgttaaacg tcgtggtgct gttcgtaaag ctaaactgta
    13021 ctacctgcgt gagcgtactg gtaaagcagc tcgtatcaaa gagcgtctta actaagaacg
    13081 cgctttcgca acatccgaaa gcttgtagaa aagaaggggc tggcattacg ctggcccctt
    13141 tttttatggg ttgctccacg ccatagacgg ttgcatgatt aagctgggtc tgtggtatca
    13201 acgctgagtc agaaacggcc tggcccgttc cttagtttag cgagcgttct gcacgccggt
    13261 gtttagcctg atacatattt cgatcggcca gttcttgtag tttttcggca gtggcatgtt
    13321 cccatgtcag cgcaaagcca atactcaggg tcatcgttat tcgctggccg ttatgcagtt
    13381 caaaaggtcg attaaacgcc tgggatagtg ctgcgcaaat acgttgtact tcatactccg
    13441 aatgtacacc gtaaagcacc atcgcaaatt catcgccgcc gagtcggtaa gtctgataac
    13501 ggctaccacc gaattccgct aatcttttgg caacctctat aagtacgcgg tcgcctgccg
    13561 catgtcccca ggtatcatta atatatttaa agttatcgcc atccagaaat aacaatgccg
    13621 aactgctacg agcggaattg tccttcatca gcgcgttaat acagctgcga aatgccgcgc
    13681 gattggcaag ccccgtcagc ggatcgtgca acgcggtacg tagtaattgt gcatttttag
    13741 cctgaagccg tagctgccat tcttccatct catccagaag gctattgaaa tcctgcgcaa
    13801 acaggtgaaa ttccgcaata cgctcatcag gtacccggcg tgaaaaattt cggttagtgc
    13861 gaacgtcgtg tacaatttca gtaatatttt gtagcgcatc cacaacgcca ttgtgtaaat
    13921 aacgcgtgag tagcagggca atgccggatg ctagcagaat acatcctgtc agcactgcca
    13981 gcgatagcca gataaaatga ccaataaggc tgtcgcgggc gacaagccgt acttcgccga
    14041 tagccctgcc gttgtgccag acgggttgcg ataccggcaa tggaaaaagc cagtggctaa
    14101 ttaagccgat gagcttatcg tctgcggctc gcgcatcata tcgccatgag gcgatagtac
    14161 ggccattttt atcgcggacc tccgccgctg aaaattgtcc ctggcgtccc agtgtggcga
    14221 gcgtttccgc tgcggccgcg ctatcggaaa ataccagtgc cgcttcaagg ctatgggcca
    14281 ttgtggcggc ggtcaaatcg agattctttt gcgcatactg tttgagcgta aggacagacg
    14341 caacgcaaat taatagccag atcaatgtca ttgtaagcag cacgctgatt atactaatcc
    14401 gccgtagtgt gcgtttaaat gttggtctgg acagagaaaa ttccttattc atgcttttga
    14461 ttccgtgcaa gcattaatac ttctggattc actctcacgc cgctatgcga gagggagtcc
    14521 aggttgacgg aaaatttgac ttcatcattg ttaatgatca gacaaaatgc gctgccaata
    14581 atacattcgg tattttgctc ggcaattaat aacaaggcat taactggata atgacgcgtt
    14641 aactccacct gataagctgg cgattcattg ccaaagtaaa aaccatcaca gcgggcgctc
    14701 agggcttctt gtgtggtacg gatgacaagc ggttgataag ggaaagccca gttagcctct
    14761 tcgctaagta ccctgacaaa acgcgcagat gaaaatatgc atagccttgg cggcccggat
    14821 aacgctggcc agtgtgtata actgacgata ccggagacaa tggcgcgtac ggatttctct
    14881 tcttccgtga cacattgagc atacagaggc aagcttgcta ataatagcga taacagaagg
    14941 ataaatcggt gagaaaaacg cattaacaag tccccaccat cttcagtcgt aaaacattaa
    15001 aatacatccg tgattgtttg tagcaaaata acattatttt gccatatcgt cattatgtct
    15061 tattgataat atgaataatt taagtggcat ccctgatatt aaattcttgt gataatggta
    15121 ttaatcaccc tatatcagaa agtaaaatta tgcgtgcgga gaaaaaataa tcaaaaaata
    15181 gcgagcatcg ctcattttac cgcttttctg aagctgggaa taaaataatt cacttgttgt
    15241 gtaaagtttt tgatacgaaa ttgagaggtt taatcgacga tttagcacta tgtaaagttt
    15301 attttacgta atatggattg aaatctttac tttttgtggt atggtttaaa catcctcgtg
    15361 gaggatcaac tatcgcaaac aagaaaagac aggatcgcca tcatgcaaaa agacgcgctg
    15421 aataacgtac gtatcaccga tgaacaggta ttaatgacgc cggagcagct taaagcggcc
    15481 tttccgttga gcctggcgca ggaagcgcag atagcgcagt cccggggaat catttctgac
    15541 attattgccg ggcgcgatcc gcgtctgttg gtggtatgcg gtccttgttc tattcacgat
    15601 cctgaaaccg ctctggaata tgcccgtcga tttaaagccc ttgccgcaga ggtcagcgat
    15661 agcctctatc tggtaatgcg cgtctatttt gaaaagccgc ggactaccgt cggctggaaa
    15721 gggctgatta acgatcctca catggatggc tcatttgatg tggaagccgg gttgaaaata
    15781 gcgcgtcagc tactggtgga actggtgaat atggggttgc cattggcgac cgaagcgttg
    15841 gatccgaaca gcccgcaata cctgggcgat ctgtttagct ggtcggcgat aggcgcgcgc
    15901 acaaccgaat cgcaaaccca ccgcgaaatg gcgtctggtc tttctatgcc ggtcggcttt
    15961 aaaaacggca cggatggcag cctggcgaca gcgattaacg ccatgcgcgc cgctgcgcaa
    16021 cctcatcgtt ttgttggcat taaccaggcc ggtcaggttg cgttattgca aacccaggga
    16081 aatccgcatg gccatgtgat tctgcgtggc ggcaaagcgc caaactatag cccggcagat
    16141 gtcgctcagt gtgaaaaaga gatggaacag gcggggctac gtccttcgct gatggtagat
    16201 tgcagtcatg gtaactccaa taaagattat cgccgccagc cagccgttgc cgaatctgtg
    16261 gttgcgcaga ttaaagatgg caatcgttca atcattggct taatgattga aagtaatatt
    16321 catgagggta atcagtcttc cgaacagccg cgcagcgaaa tgaagtatgg cgtttccgtc
    16381 accgatgctt gtattagctg ggagatgacc gatgccctgt tacgtgaaat tcataaagat
    16441 ttgagcggcc agctggcggt gcgcgtcgca taagaggttg ttatggttgc tgaattgacc
    16501 gcgttacgcg atcaaataga tgatgtcgat aaagcgttgt tgaatttact ggctaagcgc
    16561 ctggaactgg ttgccaaagt cggcgaggtg aaaagccgtt ttggcctgcc tatttacgtg
    16621 ccggagcgtg aggcctctat gctggcttca cgacgggcgg aagcagaagc gatcggtgtc
    16681 ccgcccgatc tcattgaaga tgtcctgcgc cgggtaatgc gtgaatctta ctccagcgaa
    16741 aatgataagg ggttcaaaac gctttgtcct tctctgcgtc cggtcgtcat tgtgggcggc
    16801 ggcggacaga tggggcgtct gtttgaaaaa atgctcacgc tgtcgggcta tcaggtccgt
    16861 attctggaac aacaggactg gccgcgcgcc agggacattg tcgccgatgc cggaatggtg
    16921 atcgtcagcg tgccgattca tgttactgaa caggtcatag cgcaactgcc gcccctgccg
    16981 tccgactgta ttctggtcga tctggcatcg gtgaaaagcg gtccgttaca ggcaatgttg
    17041 gcggcccatg atggccccgt gctgggcttg cacccgatgt ttggcccgga cagcgggagc
    17101 ctggcgaagc aggtggtggt ctggtgtgat gggcgtcaac cggaagcgta tcagtggttc
    17161 cttgagcaaa tccaggtgtg gggcgcgcgg ttgcaccgaa ttagcgctgt cgagcacgat
    17221 cagaacatgg cttttatcca ggcgctgcgc cactttgcta ccttcgctta tgggctgcat
    17281 ctggcggaag agaacgtcca gcttgagcag cttctggcgc tatcatcgcc gatttatcga
    17341 ctggagctgg cgatggtcgg gcgtctgttc gcccaggacc cgcagctgta tgcagacatt
    17401 attatgtcgt cggagcgcaa tctggcgctt atcaagcgtt actataaacg ttttggcgat
    17461 gcgatcgggt tactggaaca gggtgataag caggctttta tcgacagttt tcgcaaagtt
    17521 gaacactggt ttggcgatta tgccagacgc ttccagaatg aaagccgtgt gttattacgt
    17581 caggcgaatg acagccgacc ataatgatga catctatact aaaagccagc tttgctggct
    17641 tttttcgttt aaggaaccgt tatgactacg ccgcaccttt tatttgatta tgtcggacat
    17701 ttaccagaat gccccacatg gagcgaggat gaaagcgcgc tgtattggac tgatatcctg
    17761 gaacaggaga tctatcgtta ccatccggcg agtgggacgc atagcgtgct ggcgtttccg
    17821 gaagaggtag gctgttttgc cttgcgtgag cagggcggat ttattgtggc catgcgtcat
    17881 gctatttggc tggccgataa aaatggatta ttgcagcgta aggtttgcga caatccctct
    17941 aatacgaaac tggcgcgttt caacgatggc ggcactgatg gcgatggccg tttttatgcc
    18001 ggaacgttct gggcgccggg tgactataat ggcgcgttgc tgatgcggat cgatcatgac
    18061 ctgacggcaa aagtgatcca gtgcggtatc cagggacaca acggcctggc gttcagcccg
    18121 gacaaccagt ggatgtatac ttccgatacg ccgaatggcg tgatataccg cacgttactt
    18181 gataagcatg gcgaaccggg caagcgtgaa ctttttcgcc attttggcga aggagaagga
    18241 cttcccgacg gcgcggcgat ggatagcgaa gggtgctact ggagcgcgat gtttgacggc
    18301 tggcgcgtgg cgcgtttctc accgcaagga gagcagctgg aagagtaccg gttgccggta
    18361 cgttgtccga cgatggtttg ctttggcggc gcagatatga aaacgctgtt tattacaact
    18421 accagagaaa atatgtctgc tcaggaagtg gcggattatc cgctctccgg cgccatcttc
    18481 accctgcagg tagccgtcgc agggatgaag aaaagccgtt ttattgaacg tcaggcaggt
    18541 tctaccggca cgacgttttc gctgggatag cagccaagca ctttcattga gcgcgtgatc
    18601 tcgcccagct cttttagcgc gctttgcatt acctgcgact ccaggttcgc ctgaatatcg
    18661 agataaaaca tctcttccca cggattgccg tgaatggggc gcgactccag tttcgtcatg
    18721 atgagattgt ggttacgcag caccagcagc gcttcgacca gcgcgccagc ttgctgcccg
    18781 gtggcgatta acagagtggt ttttgccgga acctgatcgg aaacgttgat ggctttgcgc
    18841 gccagtacca gaaagcgggt gatattctgt gtctggtttg cggcgatgcg ttccagcacc
    18901 tgtaaaccgt gcaacatgcc gcctgcctcg ctgccgagcg ccgcgacgcg cggagagttt
    18961 gcctgcgcga ctttttccat cgctgccgac gtactctcgg tatagtcgat tttccagtgc
    19021 ggatagcggc tcaaaaattt actgcactgc tgaaacggct gcggatggct gtacaccgtt
    19081 tcgatggtat tcagatccgt agcgccggaa accagcacgc agtgatcgat agtgacggtc
    19141 atctcaccga caatcgacag actggtgtgt tgcaataagt cgtacacatc gttgatagcg
    19201 ccggagttgg tgttctctat cggaaccacg gcgtaatcgg cctggccggt ttcgacctga
    19261 tgaaaaatat cggtgaattt tgcgcaaccg ctctcaataa attgctcaaa atggcgtgca
    19321 gcatactggc gcgccgcgag atgagaatag gagcctttcg gcccaagaaa cgcaatacgt
    19381 gccgaatgag ggtgagtatt attcagatgt tgttgcagca gcgcctgctg agtaagcacg
    19441 gagtcttcaa tgataagctg gaacagacgg gtaatgtagt gtgcgtcgag atggtgggct
    19501 ttaccgagat ggatgagtct gtccagcagc gcgcgttcac gatcgatatc ccgaaccgga
    19561 cgatgcgaca gtagttttgc ttgtcccact tcaatcgcca gcgcgcgtcg ttttgccagt
    19621 aaggccagta actcttcgtc taaagcgctg attttatctc gcagcgccag taatgggttt
    19681 tccgatgtca tagtgttgcc ttttttgtta tcaataaaaa aggcctcccg gtgggggagg
    19741 ccttcttgtt cgtcttcgca ttctttatca catgacgaaa cgcctcccgg tcaggggaag
    19801 ataaaaaaga atgcgaagaa aaaccgggtg agcttcataa ctgtttcctt tgtgtacgta
    19861 agtacagtac ccgtactgtt ttaatcctgt caacaaaaaa cgcgcccgaa ggcgcgttgg
    19921 cgatacactc aatgtaaggg actactcttc ttctgcttcg acgaagctgg catctttcac
    19981 cgatgcggtg gcacgacggg cttcgccttt gtgctgcact ttattgagct gccgttccag
    20041 cttgttgatc aattcattaa tagcggtgta catatcttcg tgttttgcgc tggcgaccag
    20101 atgtccgttc ggtgtattaa tggtggcgtc agcaataaag ccctgtggct ctttagacag
    20161 aatgatatga ggattaatca ggtgagtttg ccatttttcc agtttggcga gacggtctgc
    20221 gacatgttgg cggattgccg gagtaatttc catttgttta ctggtaatgt tcattgtcat
    20281 aaattttacc tcttgtcttt cccgtcttgg tgattccagc ataccgttct taatgtcaaa
    20341 atgtgtgatg taaatcacat tattttgtca ctttttgtca aggcgaactt tttgtgaggc
    20401 atcgcaggaa gaagcgatct tttacttgag gaatggctga aagcaggcca tatttgactg
    20461 gatgcgttgc agtgaaatca tttctgttgc atcagatatc gaataaaaaa acggcagccg
    20521 gaaggctgcc gttttgcttg ttggtattgc ttcaggtgtt tttgctgtta gcggcaataa
    20581 ttttcgcgac tttgtcagcc tgcgcattca gctgcatctg acgataggcg ttttccatca
    20641 gcggcaacgc atcgcgcgtg gcctgcgtat caggataatt gcgtagcata ccttctaccc
    20701 ggtttacgac cgcaacccat gcgccgcgcg cggtatagta ctctgcgacg gaatattcat
    20761 atttcgccag acggtctttc aggaatacca gacgcttagt ggcgtcggtg gtgtactggc
    20821 tattaggata gctgcgtacc agtttcgaaa agtcattgaa cgccgcccgc gcatgttgcg
    20881 gatcgcgatc gctgcgatcg acgccaaaga aaccctgcag cacgctatca tccagcgcca
    20941 tgttcgtcag gccgcgcatg tacatgacat agtcaatatt agggtgcgtt ggattaagac
    21001 gcataaaacg atcgatggcg gcctgcgcta gcggcaaatc ggcgtttttg taataggcgt
    21061 agataagatc caactgcacc tgctgagaat acggtccgaa tggataacga ttatctaacg
    21121 cttccaattg cgttattgcc tgtttccagt taccgtcctg cagcttttgc tgagcagtcg
    21181 cgtagatttc attcggcgga ttatcgggca cctcttcctt tgaacccgag caacccgcca
    21241 gaaacaggct caacgtggct gctgccacca gatatttcat gcgcgtcatg acgttttgac
    21301 tttcctcaaa atgttttacg ggagattctc tgttcctgct cccggttaag accagctaca
    21361 atagcacact atattaaacg gcaaagccgt aaaacccaac gttaaacgaa gaagctgtat
    21421 atggcacaac gagtacaact caccgcaacg gtctccgaaa accaactcgg tcaacgctta
    21481 gatcaggctt tggccgaaat gttcccggat tattcacgtt cgcgtataaa agaatggatt
    21541 ttgaatcagc gcgtgttggt caatggtcaa ctttgcgata agccaaaaga aaaagtgtta
    21601 ggcggcgagc gggtggctat tgatgcggag atcgacgaag agattcgttt tgaagcgcag
    21661 gatatcccgt tagatattgt ttatgaagat gacgatattc tggttatcaa caaaccacgc
    21721 gatctggtgg tacatcctgg cgcgggtaac ccggacggta cggtactgaa cgcgttgcta
    21781 cattattatc cgccgattgc ggatgtcccg cgcgcgggca ttgtgcatcg tctggataag
    21841 gacacgacgg ggctgatggt ggtggccaaa accgttccgg cgcaaacgcg cctggtggag
    21901 tctttgcagc tgcgcgagat cacccgcgaa tatgaagcgg tcgcgatcgg acatatgacg
    21961 gcgggaggaa cggtgaatga acccatcagt cgtcacccga ccaaacgtac ccatatgtcg
    22021 gtgcatccta tgggcaaacc ggcggtgacc cactaccgca ttatggaaca tttccgtgtg
    22081 cacacgcgtc ttaggttgcg tctggagacc gggcgtacgc accagatccg cgtgcatatg
    22141 gcgcatatta cgcatccgtt agtgggcgat caggtctacg gtggtcgtcc acgtccaccg
    22201 aaaggcgcat cggaagaatt tatttccacg ctgcgtaagt ttgaccgcca ggcgctgcat
    22261 gcaacgatgc tgcgtctcta ccatcctgta tcgggtatcg aaatggagtg gcacgcgccg
    22321 attccacaag atatggtgga ccttatcgat gcgatgcgcg ccgatttcga agatcataaa
    22381 gatgatgtgg actggttatg aatgcactga ttgtcccgca gtggccgctg ccgaaaggcg
    22441 tcgcagcctg tagttctacc cgtattggtg gggtgagttt atcgccttac gactcgctga
    22501 atctgggcgc gcattgcggc gataacccgg agcatgttga agagaaccgc aagcgtctgt
    22561 tcgcggcggg caatctgcct tcgaaacctg tctggcttga acaggttcac ggtaaaaatg
    22621 tattgaggct taccggagaa ccttatgcct ccaaacgtgc ggatgcgtct tacagcaata
    22681 cgccaggaac cgtctgcgcg gtaatgacgg cagactgcct gcctgtgcta ttctgtaacc
    22741 gtgaggggac agaagtggcg gcggctcatg cgggctggcg cggattatgt gaaggcgtac
    22801 tggaggaaac tgtcacctgc tttgctgaca aaccagaaaa tatcatcgcc tggttaggtc
    22861 cggcgattgg cccggccgcg tttgaagtgg ggccggaagt gcgtgacgca tttttagcaa
    22921 aagatgcgca agccgatagc gcatttttgc cgcacgggga aaaatttctg gcggatattt
    22981 atcagcttgc acgccaacgt ctggcgaata ctggcgttga acatgtctat ggcggggatc
    23041 gctgcacctt tagcgaaagt gagactttct tctcttatcg tcgcgacaag acgacaggtc
    23101 gtatggcaag ttttatttgg ctgatataac ctaaagaatc aagacgatcc ggtacgggta
    23161 actttctttt cacataattc aggtcattca ccttgaataa ttgagggatg acctcattta
    23221 atctccagta gcaattttga cctgttatgg gaggagttat gcgtctggat cgtcttacta
    23281 acaaattcca gcttgctctt gccgatgccc agtcgctcgc gctggggcac gacaaccaat
    23341 tcatcgaacc tcttcattta atgagcgcct tgctgaacca ggaaggggga tcgatacgtc
    23401 ctttattaac ctccgccggc attaatgctg gccagttgcg cactgctatc gatcaggcgc
    23461 tgagccgttt accgcaggtg gaaggcaccg gcggcgacgt acagccttct tcggaactgg
    23521 tacgcgtact gaacctttgc gacaagctgg cgcaaaaacg gggggacaat tttatttcgt
    23581 cagagctgtt tgttctggcg gcgcttgagt ctcgcggcac gttaaccgat ctgctgaaat
    23641 cagccggtgc gactacggcc aatatcactc aggcaattga acagatgcgc ggaggtgaaa
    23701 gcgtgaacga tcaaggggct gaagaccaac gtcaggcctt gaaaaaatat accgtcgatc
    23761 tgaccgagcg ggctgaacaa ggtaagcttg acccggtaat tggtcgtgat gaagaaattc
    23821 gccgtaccat tcaggtattg caacgtcgta ctaaaaacaa cccggtgtta atcggtgagc
    23881 caggcgtagg taaaaccgcc attgttgaag ggctggcgca acgtattatc aacggtgaag
    23941 taccggaagg cctgaaaggc cgtcgcgtgc tggcgctgga tatgggcgcg ctggtggccg
    24001 gggcgaaata tcgcggcgaa tttgaagagc gtctgaaagg cgtgctgaac gacctcgcaa
    24061 aacaggaagg caacgtcatc ctgtttatcg acgagctgca caccatggtt ggcgcaggta
    24121 aagctgatgg cgccatggat gccggtaaca tgctgaaacc ggcgctggca cgtggggaac
    24181 tgcactgtgt gggcgccacc acgctggacg aatatcgtca gtacatcgaa aaagacgcgg
    24241 cgctggaacg tcgattccag aaagtgttcg tggcagagcc gtcggtggaa gacaccattg
    24301 cgattttgcg tggtctgaaa gagcgttatg aactgcatca ccatgtgcag atcactgacc
    24361 cggcgattgt ggcggcggca acattatctc accgctatat cgccgaccgt cagttaccgg
    24421 ataaagctat cgacctcatc gatgaagcgg catccagcat tcgtatgcag attgactcga
    24481 agccggagga gctggacagg ctcgaccgcc gcattattca gctcaaactg gaacagcagg
    24541 cgttgatgaa agagtctgac gaggcgagta aaaaacgtct cgatatgctg aatgaagaac
    24601 tggacgataa agagcgtcag tactctgagt tagaagaaga gtggaaagcg gaaaaagcgt
    24661 cgctctctgg tacgcaaact attaaagcgg agctggagca ggcgaagatc gccatcgagc
    24721 aggcgcgtcg cgttggcgac ctcgcgcgaa tgtctgaact gcagtacggc aaaattccgg
    24781 agctggaaaa acagctggaa gccgcgaccc agtcggaagg taaaaccatg cgtctgttac
    24841 gtaacaaagt aacggatgcg gaaattgccg aagtgctggc gcgctggacc ggtattccgg
    24901 tttccagaat gctggaaggc gaacgtgaaa aactgttgcg tatggaacaa gagttacaca
    24961 gccgtgtgat cgggcagaat gaagccgttg aagcagtatc gaacgccata cgccgtagcc
    25021 gcgcggggct gtccgatccg aaccgtccga ttggttcctt cctgttcctt gggccgaccg
    25081 gggtcggtaa aaccgaactg tgtaaagcgc tggctaactt tatgttcgac agcgacgacg
    25141 cgatggtgcg tatcgacatg tctgagttta tggagaaaca ctccgtgtct cgtttggtcg
    25201 gggcgcctcc aggatatgtc ggctatgaag aaggcggtta tttgacggaa gcggtgcgcc
    25261 gtcgccctta ttccgtcatc ttgttggatg aagtggaaaa agcgcatccg gatgtattca
    25321 acattctgtt gcaggtgctg gacgacggtc gactgactga cgggcagggg agaacggtcg
    25381 acttccgtaa tacggtggtc attatgactt ctaacctcgg ttccgatctc attcaggagc
    25441 gctttggcga actggattac ggtcgaatga aagagatggt gctgggtgtg gttagccaaa
    25501 acttccgtcc ggaatttatc aaccgtattg atgaagttgt ggtattccat ccgttaggtg
    25561 agcaacacat cgcttctatt gctcagatcc agctgcagcg tctgtacaaa cgtctggaag
    25621 aacgtggtta tgaaatccat atctccgacg aggcgctgaa actgttgagc gccaacggtt
    25681 acgatccggt ctacggggcg cgtccgttaa aacgtgctat tcaacagcag atcgaaaacc
    25741 cactggcgca gcaaatcctg tctggtgaac tggttcctgg caaagtgatt cgccttgaag
    25801 ccaatgatga tcgtattgtg gcagtgcagt aagtcacaaa tttgaataaa acgggcccta
    25861 acgggctcgt ttttgtttaa aaaccaggca aaaataggct tttgattcaa atgttgtttg
    25921 aaaagtgaac ggttgagctt ttttttgcat ttaggtcttg tcaggctcta ataactccct
    25981 ataatgcgcc accactgaca cggaacaacg gcatacaggc cgccgggtca ggaagacttc
    26041 gttaagaagt ctgtgagaaa agcgaaaata aacgcttgac tctgaagcgg gaaagcgtaa
    26101 tatacgccac ctcgcgacgg tgagctgaaa gccgcgtcgc acctgctctt taacaattta
    26161 tcagacaatc tgtgtgggca ctcgaagata cggattcttg acgtcgcaag acgaaaaatg
    26221 aataccaagt ctcaggagtg aacacgtaat ttattacgaa gtttaattct ttgagcatca
    26281 aacttttaaa ttgaagagtt tgatcatggc tcagattgaa cgctggcggc aggcctaaca
    26341 catgcaagtc gaacggtaac aggaagcagc tt
//
LOCUS       DAGWFR010000043        26361 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.044, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000043 DAGWFR010000000
VERSION     DAGWFR010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 26361)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26361)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26361
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.044"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            170..724
                     /locus_tag="MOX77_001850"
     CDS             170..724
                     /locus_tag="MOX77_001850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HCA3357394.1"
                     /translation="MSDTLRPYKDLFPEIGQRVMIDTSSVVIGDVRLADDVGIWPLVV
                     IRGDVNYVAIGARTNIQDGSVLHVTHKSPSNPHGNPLIIGEDVTVGHKVMLHGCTIGN
                     RVLVGMGSIVLDGAIIEDDVMIGAGSLVPQHKRLESGYLYLGSPVKQIRPLSDAERSG
                     LQYSANNYVKWKDDYLSQDNHIQP"
     gene            complement(700..957)
                     /locus_tag="MOX77_001851"
     CDS             complement(700..957)
                     /locus_tag="MOX77_001851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1488 domain-containing protein"
                     /protein_id="HCA3357395.1"
                     /translation="MNQAIQFPDREEWDTAASAIIFPALVNGMQITCAIKKDVLAYRF
                     GGETAEQWLAIFREYRWDLEEEAEALILAQQEDDHGWIWLS"
     gene            complement(954..1772)
                     /gene="aroE"
                     /locus_tag="MOX77_001852"
     CDS             complement(954..1772)
                     /gene="aroE"
                     /locus_tag="MOX77_001852"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HCA3357396.1"
                     /translation="MEAYAVFGNPIAHSKSPFIHQQFAQQLDIVHPYGRVLAPINNFI
                     NTLDAFFAAGGKGANITVPFKEEAFARSDELTERASLAGAVNTLKRLEDGRLLGDNTD
                     GIGLLSDLERLNFIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTASRAEALAK
                     IFAHTGSVHAMDMDKLDGCEFDLIINATSSGIRGEIPAIPASLIHPSLCCYDMFYQKG
                     NTPFLSWCVQQGAKRYADGLGMLVGQAAHAVLLWHGVLPQVEPVIKLLQQELLA"
     gene            complement(1777..2349)
                     /gene="tsaC"
                     /locus_tag="MOX77_001853"
     CDS             complement(1777..2349)
                     /gene="tsaC"
                     /locus_tag="MOX77_001853"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase type 1
                     TsaC"
                     /protein_id="HCA3357397.1"
                     /translation="MNNNLPTGSSAAVVDLLNKENVIAYPTEAVFGVGCDPDSETAVT
                     RLLALKQRPVDKGLILIAASFEQLKPYIDDSILTAAQRKAVFDCWPGPVTFVFPAPAT
                     TPRWLTGRFDSLAVRVTNHPLVVALCNAYGKPLVSTSANLSGLPPCRTVEEVRAQFGD
                     DFPVVEGATGGRLNPSEIRDALTGELFRQG"
     gene            complement(2354..2896)
                     /locus_tag="MOX77_001854"
     CDS             complement(2354..2896)
                     /locus_tag="MOX77_001854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase"
                     /protein_id="HCA3357398.1"
                     /translation="MAKSALFSVRKNEPCPQCGAELVIRSGKHGPFLGCSRYPECDYV
                     RPLKSQADGHIVKILEGQLCPECGAVLVLRQGRFGMFIGCSQYPQCEHTVVIDKPDET
                     AIACPACQQGHLVQRRSRYGKIFHSCDRYPECQFVINFTPVAGECPECHYSLLIEKKT
                     AQGVKRFCASKQCGKPVPVE"
     gene            complement(2923..3396)
                     /locus_tag="MOX77_001855"
     CDS             complement(2923..3396)
                     /locus_tag="MOX77_001855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005134083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF494 domain-containing protein"
                     /protein_id="HCA3357399.1"
                     /translation="MFDVLMYLFETYIHNEAELRVDQDRLERDLTDAGFDREDIYNAL
                     LWLEKLADYQDGLAEPMQLASDPLSMRIYTVEECERLDASCRGFLLFLEQIQVLNLET
                     REMVIERVLALDTAEFDLEDLKWVILMVLFNIPGCENAYQQMEELLFEVNEGMLH"
     gene            complement(3368..4492)
                     /gene="dprA"
                     /locus_tag="MOX77_001856"
     CDS             complement(3368..4492)
                     /gene="dprA"
                     /locus_tag="MOX77_001856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-protecting protein DprA"
                     /protein_id="HCA3357400.1"
                     /translation="MARTEIWLRLMYVGDLYGEAMLNMANSLIRQPQINRTHLQEAGL
                     TARQAERFLQLPAGVLDETLRWLELPQHHFLCADSEIYPPQLRAIDDYPGAIFIDGDP
                     ACLHTCQLAVVGSRSHSWYGERWGRLLCESLAKSGLTITSGLARGIDGVAHNAAMSMG
                     GKSVAVLGNGLAKIYPRRHAMLAENLIATGGAVVSEFPLSTPPLSQNFPRRNRIISGL
                     SKGVLVIEAALRSGSLVTARCALEQGRDVFALPGPIGSPGSEGTHWLIKQGATLVTTP
                     EDILENLQYGLHWLPTTAENSLYSLNQDEAALPFPELLTNVGDEVTPVDVVAERAGQP
                     VPAVVAQLLELELAGWIAAVPGGYVRLRRASHVRRTNVFV"
     gene            4624..5133
                     /gene="def"
                     /locus_tag="MOX77_001857"
     CDS             4624..5133
                     /gene="def"
                     /locus_tag="MOX77_001857"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HCA3357401.1"
                     /translation="MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEG
                     IGLAATQVDIHQRIIVIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVP
                     RAEKVKIRALDRNGNPFELEADGLLAICIQHEMDHLVGKLFIDYLSPLKQQRIRQKVE
                     KLDRLNARA"
     gene            5149..6096
                     /gene="fmt"
                     /locus_tag="MOX77_001858"
     CDS             5149..6096
                     /gene="fmt"
                     /locus_tag="MOX77_001858"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HCA3357402.1"
                     /translation="MSDSLRIIFAGTPDFAARHLDALLTSGHNIVGVFTQPDRPAGRG
                     KKLMPSPVKVLAEEKGLPVFQPVSLRPQENQHLVADLHADVMVVVAYGLILPKAVLDM
                     PRLGCINVHGSLLPRWRGAAPIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLACPIT
                     AEDTSGSLYNKLAELGPQGLITTLKQLADGTATPEAQNEALVTHAEKLSKEEARIDWS
                     LSAAQLERCIRAFNPWPMSWLEIDGQPVKVWQASVIEDATQSLPGTILAATKQGIQVA
                     TGKGILNLLSLQPAGKKAMSAQDLLNSRREWFIPGNRLA"
     gene            6148..7437
                     /gene="rsmB"
                     /locus_tag="MOX77_001859"
     CDS             6148..7437
                     /gene="rsmB"
                     /locus_tag="MOX77_001859"
                     /EC_number="2.1.1.176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HCA3357403.1"
                     /translation="MKKQNNLRSLAAQAVELVVEQGQSLSNVLPPLQQKVADKDKALL
                     QELCFGVLRTLSQLEWLINKLMSRPMTGKQRTVHYLIMVGFYQLLYTRVPPHAALAET
                     VEGAVSIKRPQLKGLINGVLRQFQRQQETLLNEFATSDARFLHPGWLVKRLQNAYPTQ
                     WQRIIEANNQRPPMWLRVNRTHHTRDGWLGLLEDAGMKGYPHPDYPDAVRLETPAPVH
                     ALPGFAEGWVTVQDASAQGCAVFLAPQNGEHILDLCAAPGGKTTHILEVAPEADVLAV
                     DIDEQRLSRVYDNLKRLGMKATVKQGDGRYPAQWCGEQQFDRILLDAPCSATGVIRRH
                     PDIKWLRRDRDIAELAQLQAEILDAVWPRLKPGGTLVYATCSVLPEENRDQIKAFLQR
                     TPDAALSETGTPDQPGQQNLPGGEEGDGFFYAKLIKK"
     gene            7459..8835
                     /gene="trkA"
                     /locus_tag="MOX77_001860"
     CDS             7459..8835
                     /gene="trkA"
                     /locus_tag="MOX77_001860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004125888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trk system potassium transporter TrkA"
                     /protein_id="HCA3357404.1"
                     /translation="MKIIILGAGQVGGTLAENLVGENNDITVVDTNGERLRSLQDKFD
                     LRVVQGHGSHPRVLREAGADDADMLVAVTSSDETNMVACQVAYSLFNTPNRIARIRSP
                     DYVRDADKLFHSEAVPIDHLIAPEQLVIDNIYRLIEYPGALQVVNFAEGKVSLAVVKA
                     YYGGPLIGNALSTMREHMPHIDTRVAAIFRHDRPIRPQGSTIVEAGDEVFFIAASQHI
                     RAVMSELQRLEKPYKRIMLVGGGNIGAGLARRLEKDYSVKLIERDQQRAAELAEKLQN
                     TIVFFGDASDQELLAEEHIDQVDLFIAVTNDDEANIMSAMLAKRMGAKKVMVLIQRRA
                     YVDLVQGSVIDIAISPQQATISALLSHVRKADIVGVSSLRRGVAEAIEAVAHGDESTS
                     RVVGRVIDEIKLPPGTIIGAVVRGNDVMIANDNLRIEQGDHVIMFLTDKKFITDVERL
                     FQPSPFFL"
     gene            8977..9390
                     /gene="mscL"
                     /locus_tag="MOX77_001861"
     CDS             8977..9390
                     /gene="mscL"
                     /locus_tag="MOX77_001861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="large-conductance mechanosensitive channel
                     protein MscL"
                     /protein_id="HCA3357405.1"
                     /translation="MSFIKEFREFAMRGNVVDLAVGVIIGAAFGKIVSSLVADIIMPP
                     LGLLIGGIDFKQFAFTLREAQGDIPAVVMHYGVFIQNVFDFVIVAFAIFVAIKLINRL
                     NRKKAEEPAAPPAPSKEEVLLGEIRDLLKEQNNRS"
     gene            complement(9326..9595)
                     /locus_tag="MOX77_001862"
     CDS             complement(9326..9595)
                     /locus_tag="MOX77_001862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alternative ribosome-rescue factor A"
                     /protein_id="HCA3357406.1"
                     /translation="MSRYQHKKGQIKDNAIEALLHDPLFRQRVEKNKKGKGSYLRKGK
                     HGNRGNWEASGKKVSDFFTTGLLLIKNGYFVLSADRGFRPITLPL"
     gene            complement(9654..10079)
                     /gene="zntR"
                     /locus_tag="MOX77_001863"
     CDS             complement(9654..10079)
                     /gene="zntR"
                     /locus_tag="MOX77_001863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn(2+)-responsive transcriptional regulator"
                     /protein_id="HCA3357407.1"
                     /translation="MYRIGELAKLADVTPDTIRYYEKQQMMDHEVRTEGGFRLYTEND
                     LQRLKFIRYARQLGFTLESIRELLSIRIDPEHHTCQESKSIVQERLQEVEARIAELQT
                     MQRSLQRLNDACCGTAHSSVYCSILEALEQGASGAKSVC"
     gene            complement(10090..10458)
                     /locus_tag="MOX77_001864"
     CDS             complement(10090..10458)
                     /locus_tag="MOX77_001864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1992 domain-containing protein"
                     /protein_id="HCA3357408.1"
                     /translation="MWLLDQWAERHIIEAQRKGEFDNLPGRGEPLILDDDSHVPAELR
                     AGYRLLKNAGCLPPELEQRRDAIQLLDILNSIREDDPQYHQVSRQLSLLELKLRQAGL
                     STDFLHGEYAEKLLHKINDN"
     gene            complement(10565..10948)
                     /gene="rplQ"
                     /locus_tag="MOX77_001865"
     CDS             complement(10565..10948)
                     /gene="rplQ"
                     /locus_tag="MOX77_001865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HCA3357409.1"
                     /translation="MRHRKSGRQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKEL
                     RRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGF
                     RAGDNAPMAYIELVDRSEKTEAAAE"
     gene            complement(10989..11978)
                     /gene="rpoA"
                     /locus_tag="MOX77_001866"
     CDS             complement(10989..11978)
                     /gene="rpoA"
                     /locus_tag="MOX77_001866"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005970247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HCA3357410.1"
                     /translation="MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALR
                     RILLSSMPGCAVTEVEIDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTL
                     NKSGIGPVTAADITHDGDVEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASTRIH
                     SEEDERPIGRLLVDACYSPVERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIR
                     RAATILAEQLEAFVDLRDVRQPEVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIH
                     YIGDLVQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLENWPPASIADE"
     gene            complement(12004..12624)
                     /gene="rpsD"
                     /locus_tag="MOX77_001867"
     CDS             complement(12004..12624)
                     /gene="rpsD"
                     /locus_tag="MOX77_001867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004410410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HCA3357411.1"
                     /translation="MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIGQAPGQHGAR
                     KPRLSDYGVQLREKQKVRRIYGVLERQFRNYYKEAARLKGNTGENLLALLEGRLDNVV
                     YRMGFGATRAEARQLVSHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALE
                     LAEQREKPTWLEVDAGKMEGTYKRKPERSDLSADINEHLIVELYSK"
     gene            complement(12658..13047)
                     /gene="rpsK"
                     /locus_tag="MOX77_001868"
     CDS             complement(12658..13047)
                     /gene="rpsK"
                     /locus_tag="MOX77_001868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001029758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HCA3357412.1"
                     /translation="MAKAPVCARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGW
                     ATAGGSGFRGSRKSTPFAAQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNA
                     AGFRITNITDVTPIPHNGCRPPKKRRV"
     gene            complement(13064..13420)
                     /gene="rpsM"
                     /locus_tag="MOX77_001869"
     CDS             complement(13064..13420)
                     /gene="rpsM"
                     /locus_tag="MOX77_001869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019935869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HCA3357413.1"
                     /translation="MARIAGINIPDQKHAVIALTSIYGVGKTRSKAILAAAGIAENVK
                     ISELSEEQIDTLRDEVAKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRT
                     KTNARTRKGPCKPIKK"
     gene            complement(13567..13683)
                     /gene="rpmJ"
                     /locus_tag="MOX77_001870"
     CDS             complement(13567..13683)
                     /gene="rpmJ"
                     /locus_tag="MOX77_001870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020322760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HCA3357414.1"
                     /translation="MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG"
     gene            complement(13715..15046)
                     /gene="secY"
                     /locus_tag="MOX77_001871"
     CDS             complement(13715..15046)
                     /gene="secY"
                     /locus_tag="MOX77_001871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004868351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HCA3357415.1"
                     /translation="MAKQPGLDFQSAKGGLGELKRRLLFVIGALIVFRIGSFIPIPGI
                     DAAVLAKLLEQQRGTIIEMFNMFSGGALSRASIFALGIMPYISASIIIQLLTVVHPTL
                     AEIKKEGESGRRKISQYTRYGTLVLAIFQSIGIATGLPNMPGMQGLVMNPGFAFYFTA
                     VVSLVTGTMFLMWLGEQITERGIGNGISIIIFAGIVAGLPPAIAHTIEQARQGDLHFL
                     VLLLVAVLVFAVTFFVVFVERGQRRIVVNYAKRQQGRRVYAAQSTHLPLKVNMAGVIP
                     AIFASSIILFPATIASWFGGGTGWNWLTTISLYLQPGQPLYVLLYASAIIFFCFFYTA
                     LVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTHLTLVGALYITFICLIPEFMR
                     DAMKVPFYFGGTSLLIVVVVIMDFMAQVQTLMMSSQYESALKKANLKGYGR"
     gene            complement(15054..15488)
                     /gene="rplO"
                     /locus_tag="MOX77_001872"
     CDS             complement(15054..15488)
                     /gene="rplO"
                     /locus_tag="MOX77_001872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011095501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HCA3357416.1"
                     /translation="MRLNTLSPAEGSKKAGKRLGRGIGSGLGKTGGRGHKGQKSRSGG
                     GVRRGFEGGQMPLYRRLPKFGFTSRKAAITAEVRLSDLAKVEGGVVDLNTLKAANIIG
                     IQIEFAKVILAGEVTTPVTVRGLRVTKGARAAIEAAGGKIEE"
     gene            complement(15492..15671)
                     /gene="rpmD"
                     /locus_tag="MOX77_001873"
     CDS             complement(15492..15671)
                     /gene="rpmD"
                     /locus_tag="MOX77_001873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012147215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HCA3357417.1"
                     /translation="MAKTIKITQTRSAIGRLPKHKATLLGLGLRRIGHTVEREDTPAV
                     RGMVNAVSFMVKVEE"
     gene            complement(15675..16178)
                     /gene="rpsE"
                     /locus_tag="MOX77_001874"
     CDS             complement(15675..16178)
                     /gene="rpsE"
                     /locus_tag="MOX77_001874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004106339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HCA3357418.1"
                     /translation="MAHIEKQAGELQEKLIAVNRVSKTVKGGRIFSFTALTVVGDGNG
                     RVGFGYGKAREVPAAIQKAMEKARRNMINVALNNGTLQHPVKGVHTGSRVFMQPASEG
                     TGIIAGGAMRAVLEVAGVHNVLAKAYGSTNPINVVRATIDGLENMNSPEMVAAKRGKS
                     VEEILGK"
     gene            complement(16193..16546)
                     /gene="rplR"
                     /locus_tag="MOX77_001875"
     CDS             complement(16193..16546)
                     /gene="rplR"
                     /locus_tag="MOX77_001875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005970258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HCA3357419.1"
                     /translation="MDKKSARIRRATRARRKLKELGATRLVVHRTPRHIYAQVIAPNG
                     SEVLVAASTVEKAIAEQLKYTGNKDAAAAVGKAVAERALEKGIKDVSFDRSGFQYHGR
                     VQALADAAREAGLQF"
     gene            complement(16556..17089)
                     /gene="rplF"
                     /locus_tag="MOX77_001876"
     CDS             complement(16556..17089)
                     /gene="rplF"
                     /locus_tag="MOX77_001876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003031129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HCA3357420.1"
                     /translation="MSRVAKAPVVVPAGVDVKINGQVITIKGKNGELTRTLNDAVEVK
                     HADNALTFGPRDGYADGWAQAGTARALLNSMVIGVTEGFTKKLQLVGVGYRAAVKGNV
                     VNLSLGFSHPVDHQLPAGITAECPTQTEIVLKGADKQVIGQVAADLRAYRRPEPYKGK
                     GVRYADEVVRTKEAKKK"
     gene            complement(17102..17494)
                     /gene="rpsH"
                     /locus_tag="MOX77_001877"
     CDS             complement(17102..17494)
                     /gene="rpsH"
                     /locus_tag="MOX77_001877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011148781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HCA3357421.1"
                     /translation="MSMQDPIADMLTRIRNGQAANKAAVTMPSSKLKVAIANVLKEEG
                     FIEDFKVEGDTKPELELTLKYFQGKAVVESIQRVSRPGLRIYKRKDELPKVMAGLGIA
                     VVSTSKGVMTDRAARQAGLGGEIICYVA"
     gene            complement(17528..17833)
                     /gene="rpsN"
                     /locus_tag="MOX77_001878"
     CDS             complement(17528..17833)
                     /gene="rpsN"
                     /locus_tag="MOX77_001878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HCA3357422.1"
                     /translation="MAKQSMKAREVKRVALADKYFAKRAELKAIISDVNATDEDRWNA
                     VLKLQTLPRDSSPSRQRNRCRQTGRPHAFLRKFGLSRIKVREAAMRGEIPGLKKASW"
     gene            complement(17848..18387)
                     /gene="rplE"
                     /locus_tag="MOX77_001879"
     CDS             complement(17848..18387)
                     /gene="rplE"
                     /locus_tag="MOX77_001879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001096198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HCA3357423.1"
                     /translation="MAKLHDYYKDEVVNKLMTEFNYNSVMQVPRVEKITLNMGVGEAI
                     ADKKLLDNAAADLTAISGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFER
                     LITIAVPRIRDFRGLSAKSFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTA
                     KSDEEGRALLAAFDFPFRK"
     gene            complement(18402..18716)
                     /gene="rplX"
                     /locus_tag="MOX77_001880"
     CDS             complement(18402..18716)
                     /gene="rplX"
                     /locus_tag="MOX77_001880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000729185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HCA3357424.1"
                     /translation="MAAKIRRDDEVIVLTGKDKGKRGKVKNVLSSGKVIVEGINLVKK
                     HQKPVPALNQPGGIVEKEAAIQVSNVAIFNTATGKADRVGFRFEDGKKVRFFKSNSET
                     IK"
     gene            complement(18727..19098)
                     /gene="rplN"
                     /locus_tag="MOX77_001881"
     CDS             complement(18727..19098)
                     /gene="rplN"
                     /locus_tag="MOX77_001881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015817037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HCA3357425.1"
                     /translation="MIQEQTMLNVADNSGARRVMCIKVLGGSHRRYAGVGDIIKITIK
                     EAIPRGKVKKGDVLKAVVVRTKKGVRRPDGSVIRFDGNACVILNNNSEQPIGTRIFGP
                     VTRELRNEKFMKIISLAPEVL"
     gene            complement(19262..19516)
                     /gene="rpsQ"
                     /locus_tag="MOX77_001882"
     CDS             complement(19262..19516)
                     /gene="rpsQ"
                     /locus_tag="MOX77_001882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006817275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HCA3357426.1"
                     /translation="MTDKIRTLQGRVVSDKMEKSIVVAIERFVKHPIYGKFIKRTTKM
                     HVHDENNECGIGDVVEIRECRPLSKTKSWTLVRVVEKAVL"
     gene            complement(19516..19707)
                     /gene="rpmC"
                     /locus_tag="MOX77_001883"
     CDS             complement(19516..19707)
                     /gene="rpmC"
                     /locus_tag="MOX77_001883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000644743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HCA3357427.1"
                     /translation="MKAKELREKSVEELNTELLNLLREQFNLRMQAASGQLQQSHLLK
                     QVRRDVARVKTLLTEKAGA"
     gene            complement(19707..20117)
                     /gene="rplP"
                     /locus_tag="MOX77_001884"
     CDS             complement(19707..20117)
                     /gene="rplP"
                     /locus_tag="MOX77_001884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017805229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HCA3357428.1"
                     /translation="MLQPKRTKFRKMHKGRNRGLAAGADVSFGSFGLKAVGRGRLTAR
                     QIEAARRAMTRAVKRQGKIWIRVFPDKPITEKPLAVRMGKGKGNVEYWVALIQPGKVL
                     YEMDGVPEELAREAFKLAAAKLPIKTTFVTKTVM"
     gene            complement(20130..20831)
                     /gene="rpsC"
                     /locus_tag="MOX77_001885"
     CDS             complement(20130..20831)
                     /gene="rpsC"
                     /locus_tag="MOX77_001885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001742302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HCA3357429.1"
                     /translation="MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLT
                     KELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQIN
                     IAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGA
                     EIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPE
                     KPAAQPKKQQRKGRK"
     gene            complement(20849..21181)
                     /gene="rplV"
                     /locus_tag="MOX77_001886"
     CDS             complement(20849..21181)
                     /gene="rplV"
                     /locus_tag="MOX77_001886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000447526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HCA3357430.1"
                     /translation="METIAKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAA
                     VLVKKVLESAIANAEHNDGADIDDLKVTKIFVDEGPSMKRIMPRAKGRADRILKRTSH
                     ITVVVSDR"
     gene            complement(21196..21474)
                     /gene="rpsS"
                     /locus_tag="MOX77_001887"
     CDS             complement(21196..21474)
                     /gene="rpsS"
                     /locus_tag="MOX77_001887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011148791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HCA3357431.1"
                     /translation="MPRSLKKGPFIDLHLLKKVEKAVESGDKKPLRTWSRRSTIFPNM
                     IGLTIAVHNGRQHVPVFVSDEMVGHKLGEFAPTRTYRGHAADKKAKKK"
     gene            complement(21491..22312)
                     /gene="rplB"
                     /locus_tag="MOX77_001888"
     CDS             complement(21491..22312)
                     /gene="rplB"
                     /locus_tag="MOX77_001888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001738551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HCA3357432.1"
                     /translation="MAVVKCKPTSPGRRHVVKVVNPELHKGKPFAPLVEKNSKSGGRN
                     NNGRITTRHIGGGHKQAYRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDGERR
                     YILAPKGLKAGDQIQSGVDAAIKAGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGT
                     YVQIVARDGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARWRGVRP
                     TVRGTAMNPVDHPHGGGEGRNFGKHPVTPWGVQTKGKKTRSNKRTDKFIVRRRSK"
     gene            complement(22330..22632)
                     /gene="rplW"
                     /locus_tag="MOX77_001889"
     CDS             complement(22330..22632)
                     /gene="rplW"
                     /locus_tag="MOX77_001889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007891652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HCA3357433.1"
                     /translation="MIREERLLKVLRAPHVSEKASTAMEKTNTIVLKVAKDATKAEIK
                     AAVQKLFEVEVEVVNTLVVKGKVKRHGQRIGRRSDWKKAYVTLKEGQNLDFVGGAE"
     gene            complement(22629..23234)
                     /gene="rplD"
                     /locus_tag="MOX77_001890"
     CDS             complement(22629..23234)
                     /gene="rplD"
                     /locus_tag="MOX77_001890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010304939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HCA3357434.1"
                     /translation="MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTR
                     AQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYR
                     GALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLA
                     ARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEMLA"
     gene            complement(23245..23874)
                     /gene="rplC"
                     /locus_tag="MOX77_001891"
     CDS             complement(23245..23874)
                     /gene="rplC"
                     /locus_tag="MOX77_001891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000579825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HCA3357435.1"
                     /translation="MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDG
                     YRAVQVTTGAKKANRVTKPEAGHFAKAGVEAGRGLWEFRLAEGEEYTVGQSISVELFA
                     DVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKK
                     MAGQMGNERVTVQSLDVVRVDAERNLLLVKGGVPGATGCDLIVKPAVKA"
     gene            complement(23907..24218)
                     /gene="rpsJ"
                     /locus_tag="MOX77_001892"
     CDS             complement(23907..24218)
                     /gene="rpsJ"
                     /locus_tag="MOX77_001892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014268624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HCA3357436.1"
                     /translation="MQNQRIRIRLKAFDHRLIDQSTAEIVETAKRTGAQVRGPIPLPT
                     RKERFTVLISPHVNKDARDQYEIRTHKRLVDIVEPTEKTVDALMRLDLAAGVDVQISL
                     G"
     gene            24598..25065
                     /gene="hopD"
                     /locus_tag="MOX77_001893"
     CDS             24598..25065
                     /gene="hopD"
                     /locus_tag="MOX77_001893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leader peptidase HopD"
                     /protein_id="HCA3357437.1"
                     /translation="MFVALPFLIFYASFSLLLGIYDARTGLLPDRFTCPLLWGGLLYH
                     QICLPERLPDALWGAIAGYGGFALIYWGYRLRYQKEGLGYGDVKYLAALGAWHCWETL
                     PLLVFLAAMLACGRFGVALLVRGKSALINPLPFGPWLAVAGFITGWKVFFPDG"
     gene            complement(25062..25538)
                     /gene="bfr"
                     /locus_tag="MOX77_001894"
     CDS             complement(25062..25538)
                     /gene="bfr"
                     /locus_tag="MOX77_001894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HCA3357438.1"
                     /translation="MKGDVKIINYLNKLLGNELVAINQYFLHARMFKNWGLTRLNDVE
                     YHESIDEMKHADKYIERILFLEGIPNLQDLGKLGIGEDVEEMLRSDLRLELEGAKDLR
                     EAIAYADNVHDYVSRDMMIEILADEEGHIDWLETELDLIAKLGMQNYLQSQIKVTD"
     gene            complement(25611..25805)
                     /gene="bfd"
                     /locus_tag="MOX77_001895"
     CDS             complement(25611..25805)
                     /gene="bfd"
                     /locus_tag="MOX77_001895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin-associated ferredoxin"
                     /protein_id="HCA3357439.1"
                     /translation="MYVCLCNGISDKKIRQAVRQFHPQSFQQLRKFIPVGNQCGKCIR
                     AAREVMQDELTQMPEFKEIA"
     gene            complement(25990..>26361)
                     /gene="tuf"
                     /locus_tag="MOX77_001896"
     CDS             complement(25990..>26361)
                     /gene="tuf"
                     /locus_tag="MOX77_001896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312217.1"
                     /note="EF-Tu; promotes GTP-dependent binding of
                     aminoacyl-tRNA to the A-site of ribosomes during protein
                     biosynthesis; when the tRNA anticodon matches the mRNA
                     codon, GTP hydrolysis results; the inactive EF-Tu-GDP
                     leaves the ribosome and release of GDP is promoted by
                     elongation factor Ts; many prokaryotes have two copies of
                     the gene encoding EF-Tu; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HCA3357440.1"
                     /translation="GENVGVLLRGIKREEIERGQVLAKPGTIKPHTKFESEVYILSKD
                     EGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEMVMPGDNIKMVVTLIHPIAMDDGL
                     RFAIREGGRTVGAGVVAKVLG"
BASE COUNT         6393 a         6995 c         6371 g         6602 t
ORIGIN      
        1 cccatttttt tgcacaagcg ttttttggat cttttttctg tttgttgatt tttcatccct
       61 ttcgctccat tcctgcgcaa agtggcgatt ttttgatgct atctcccctt gcacaacgcc
      121 gttaaagcaa ccaaagtctt catgactatt catttatgat gaggtagaca tgtctgacac
      181 attacgtcct tataaggatc tttttcctga aatcggtcag cgcgtgatga tcgataccag
      241 cagcgtggtt attggcgatg tccgtctggc ggatgatgtc gggatctggc cgcttgtggt
      301 gattcgcggc gatgtgaatt acgttgcgat aggggctcgt acgaacattc aggatggcag
      361 cgttcttcac gtaacccaca agtctccatc caatccacac ggcaacccat taatcattgg
      421 cgaagatgtt accgttggcc ataaagttat gctgcacggc tgtaccatcg gtaaccgcgt
      481 actggtcggt atgggctcca ttgtgctgga tggcgcgata atagaagatg acgtaatgat
      541 tggcgcggga agcctggtgc cgcagcacaa acggctggaa agcggctatt tatatcttgg
      601 cagtccggta aaacagatcc gccccctgag cgatgctgag agatcgggcc tgcagtactc
      661 cgccaataac tatgtaaaat ggaaagacga ctatctttct caggataacc atatccaacc
      721 gtgatcgtct tcctgctggg ccaggattaa tgcttcagcc tcttcttcca ggtcccagcg
      781 atactcacga aaaatggcca gccattgctc cgctgtttct ccaccaaagc gatacgccag
      841 tacatctttt tttatcgcac acgtgatttg catcccattg accagggcgg gaaagatgat
      901 agcgctggcg gcagtatccc attcttcgcg gtcagggaat tgtatggcct ggttcacgct
      961 aataattcct gctgtagcag cttaatcact ggctcgacct gcggtaatac accgtgccaa
     1021 agcaaaacgg catgtgcagc ctgccccacc agcattccca gcccatctgc gtagcgtttc
     1081 gcgccctgtt gtacacacca ggagagaaat ggcgtattcc ctttttgata gaacatgtca
     1141 tagcaacaga gggaaggatg aataagtgac gccggaatcg ccgggatttc gccccgtatg
     1201 ccgctggagg tcgcattaat aatcaggtca aactcacaac catccagctt gtccatatcc
     1261 atagcatgaa cgctgccggt atgagcaaag attttcgcca acgcttcggc acgtgaagct
     1321 gtacggttag tgatagtgac cgcacaatcc aaagaaagca ggggtaacag cacgccccgg
     1381 gatgcgccgc ccgcgccaat cagcaaaata cgcaatcctg ggcggataaa atttaaacgt
     1441 tcgagatcgc ttaataaacc gataccgtca gtattgtcgc caagcaaacg accatcttcc
     1501 agccgtttta atgtattgac ggctcccgcc agcgatgctc gttccgttaa ctcatccgaa
     1561 cgcgcaaacg cctcctcttt aaaaggtact gtgatgtttg cgccttttcc ccctgccgcg
     1621 aaaaaggcat caagcgtatt aatgaaatta ttaatggggg ccagcacgcg accatagggg
     1681 tgaacaatat ctagctgctg agcaaattgc tgatgaataa atggcgattt gctgtgcgca
     1741 atcggatttc caaaaacagc ataggcttcc atcatattac ccctgtcgaa atagttcgcc
     1801 cgtcagagca tcgcggattt ctgaaggatt taaacgccca cccgttgcgc cttcaaccac
     1861 cggaaaatca tcgccaaatt gcgcacgcac ctcttcaacg gtacggcatg gcggtaatcc
     1921 gctcagattg gcgctggtgg aaaccagcgg tttgccatac gcattgcata gcgcgaccac
     1981 cagcgggtgg ttggtaacac gaacggccag ggaatcaaaa cgtcccgtga gccaccgcgg
     2041 cgttgtcgcg ggcgcaggaa aaacaaacgt taccggcccg ggccagcaat caaataccgc
     2101 tttacgctgt gcggcggtaa gtatgctgtc atcaatataa ggttttaact gctcaaagct
     2161 ggcggcaatc aaaatgagtc ccttatcgac gggccgttgt tttaacgcca gcaggcgcgt
     2221 aacggctgtt tcactatcgg gatcgcagcc gacgccgaaa acggcttctg ttggataagc
     2281 gatgacattt tctttattca ggagatctac caccgcggcg ctagatcctg ttggcaggtt
     2341 attattcact tgtttattcc accggaaccg gctttccaca ttgtttactg gcgcaaaagc
     2401 gcttcacgcc ctgcgcggtt ttcttttcga tgagtagcga ataatggcac tcggggcatt
     2461 cccccgcaac cggtgtgaag ttaatgacga actgacattc cgggtagcga tcgcaggaat
     2521 gaaagatttt accgtaacga gaacggcgct ggaccaaatg tccttgctgg caggctggac
     2581 aggcaatcgc cgtttcatcc ggtttatcaa taaccactgt atgttcacat tgcggatact
     2641 gactgcatcc gatgaacatg ccaaagcgcc cctgacgcag caccagtacg gcgccacact
     2701 caggacacag ttgcccctcc agaattttaa cgatatgtcc gtccgcctga cttttcagcg
     2761 gacgaacgta atcgcattcc ggatagcgag aacagccgag aaacggacca tgtttcccgg
     2821 aacgaattac cagttcggcc ccgcactgcg ggcagggctc atttttacgc accgaaaaca
     2881 gtgctgattt agccatattc actcatgcag cattaacacc tatcaatgca gcataccttc
     2941 atttacctca aagagtaatt cttccatttg ctgataggcg ttttcacagc ccggaatgtt
     3001 gaataacacc atcaaaataa cccatttcaa gtcttccagg tcaaactctg cggtatccag
     3061 cgccagcaca cgctcaatca ccatttctcg tgtttcgagg tttagcacct gaatctgctc
     3121 aaggaataac aggaaccccc ggcaactggc atcaagcctt tcacattctt caaccgtata
     3181 aatgcgcatt gaaagagggt cggaagcaag ttgcatgggt tccgcgaggc catcctgata
     3241 gtcagcgagt ttttccagcc acagcagcgc attgtagatg tcttcgcgat caaacccagc
     3301 gtcggtgaga tcacgctcca gtctgtcctg atccacgcgc agctcggctt cgttatggat
     3361 gtatgtttca aacaaataca ttagtacgtc gaacatggct tgccctcctt aatcggacat
     3421 agccgccggg tacagctgcg atccatcctg ctaactccag ttcgagtagc tgagccacta
     3481 ccgctggcac aggttggccg gcacgttcag cgacgacgtc aacaggtgtt acctcatctc
     3541 ctacgttagt caggagctca ggaaatggca atgccgcctc atcctgattt agtgaataaa
     3601 gtgaattttc cgccgtagtt ggcaaccagt gtaagccgta ttgcaaattt tccagaatat
     3661 cctccggcgt cgtcacaagc gtggcccctt gtttaattaa ccagtgcgtg ccttcgcttc
     3721 ccggactacc gatagggcct ggtaatgcaa aaacgtcccg cccctgttca agcgcgcagc
     3781 gcgccgtcac caacgaaccg ctgcgcaacg ccgcctcaat caccagtacg cctttgctca
     3841 gtccgctgat gatacggttt ctgcgaggaa aattttgcga tagcggaggc gttgaaagcg
     3901 gaaattctga gaccactgcg ccgccagtgg caatcaagtt ttcagccagc atggcatgtc
     3961 ggcgaggata aatctttgcc aagccattcc ctaacaccgc tacacttttt ccccccatac
     4021 tcatcgcggc gttgtgtgct acgccatcaa ttcctcgggc aaggccgctg gtgatcgtca
     4081 aaccgctttt cgcaaggctt tcgcaaagca gacgtcccca gcgttctcca taccaggagt
     4141 ggctccggct cccgacgacg gcaagttggc aggtatgcag acaggcagga tcgccgtcaa
     4201 taaaaatagc gccgggataa tcgtcaatag cacgcagttg aggaggataa atctcactat
     4261 ccgcacacag aaaatggtgc tgcggtagtt caagccagcg taacgtctca tcaagcacac
     4321 ctgctggaag ctgtaaaaaa cgttcagctt gccgcgcagt aagaccagcc tcctgaaggt
     4381 gcgtgcgatt tatctgaggc tggcgaataa gcgaattcgc catgttcaac atcgcctcgc
     4441 cataaaggtc gccgacgtac attaaacgta accaaatttc ggtacgggcc atcctttccc
     4501 tcccctgcca caagcagtct gaacaatctt tgcgattggt cactgatgct gtcaatcagg
     4561 tggggatttg tctagaatag aggtaataat cttttcaact cctgaacaca actctggata
     4621 attatgtcag ttttgcaagt gttacatatt ccggacgagc gccttcgcaa agtcgcaaag
     4681 ccggttgaag aagtgaatgc agaaattcag cgtatcgtcg atgatatgtt cgaaacgatg
     4741 tacgcggaag aaggtatcgg tctggccgca acgcaggtcg atatccacca gcggatcatc
     4801 gtgattgacg tttcggaaaa ccgcgacgag cgcctggtac tcattaaccc ggaattgctg
     4861 gagaaaagtg gcgaaacggg tatagaagaa ggctgtctgt cgatcccgga acagcgcgct
     4921 ttagtgccgc gcgccgagaa agtgaaaatc cgcgcgctgg atcgcaacgg caacccgttt
     4981 gagcttgaag cggatggttt gctggcaatc tgcattcagc atgagatgga tcacctggtc
     5041 ggtaaactgt ttatcgatta tttgtcgccg ctgaagcaac aacgtattcg tcagaaagta
     5101 gaaaaactcg accgcctgaa cgcccgggct taaaggacaa gaaccaacgt gtcagattca
     5161 ctacgtatta tttttgcggg tacacctgac tttgcagcgc gtcatctcga cgcgctgtta
     5221 acttctggac ataacattgt cggcgtattt acccaacccg atcgtccagc aggtcgcggc
     5281 aaaaagttga tgcccagccc ggtaaaagtg ctggcggaag aaaaaggcct gcccgttttc
     5341 cagcccgtgt cgcttcgtcc tcaggaaaac cagcatctgg tggctgactt acatgccgac
     5401 gtcatggttg tcgtagcata tggtctgatt ctcccaaagg cagtgctgga tatgccccgt
     5461 ctcggatgta tcaacgttca cggttcgctg cttccacgct ggcgcggcgc ggcgcctatt
     5521 cagcgctcac tctgggcagg cgatgcggaa accggcgtca caattatgca gatggatgta
     5581 gggctggata ccggcgacat gctgtataaa cttgcgtgcc cgattaccgc agaagatacc
     5641 agtggctcac tgtataataa gttggctgaa cttggcccac aggggttaat taccacacta
     5701 aaacaactgg cggacggcac agcgacgcct gaagcgcaga atgaagcgct ggtcactcat
     5761 gcggaaaagc tcagtaaaga agaagcgcgt atcgactggt ctctctccgc agcacagctg
     5821 gagcgttgca ttcgcgcctt taatccgtgg ccaatgagct ggctggaaat cgacggccag
     5881 ccggtaaaag tctggcaggc atccgtcatt gaggacgcca cgcagtcgct gccgggaacc
     5941 attctggccg cgacgaaaca gggcattcag gttgcaacag gcaaggggat attaaatttg
     6001 ctttcgcttc agcctgccgg caaaaaagcg atgagcgccc aggatctgtt aaattcacgc
     6061 cgggaatggt ttatccctgg taaccgcctt gcctgacggt cacgtcttta tacgcccggt
     6121 gttaccgggc atttttattt tatacatatg aaaaaacaaa acaatttacg tagtctggca
     6181 gcacaggccg ttgaactggt cgtcgaacag ggacaatcat taagtaatgt gctcccgccg
     6241 ctgcaacaaa aagtcgccga taaagacaaa gcgctacttc aggagctgtg ctttggcgtc
     6301 ctgcgcaccc tttcacagct ggaatggctg atcaataagc tgatgtctcg tccaatgacc
     6361 ggcaagcagc gtacagtgca ttacttaatt atggtcggct tttatcagtt gctgtacacc
     6421 cgcgtccctc cccatgcggc gctggctgaa accgttgaag gcgcggtctc catcaaacgt
     6481 ccgcagttga aagggttaat taacggcgtc ctgcgccagt tccagcgcca gcaggaaacg
     6541 ttgcttaatg agtttgcgac cagcgatgcg cgctttttac atcccggttg gctggtaaag
     6601 cgtttgcaaa atgcttaccc cacacagtgg caacgcatta ttgaagcgaa taaccagcgt
     6661 ccacctatgt ggctacgtgt aaatcgtaca caccacaccc gcgacggttg gcttggctta
     6721 cttgaagacg caggcatgaa gggatatccc catcccgatt atcccgacgc tgtgcgtctg
     6781 gaaacgccag ctccggtaca tgctttaccc ggttttgctg agggttgggt aactgtccag
     6841 gatgcctctg cgcagggatg tgcggttttt ctcgctcctc agaacggtga gcacatttta
     6901 gacttgtgcg ccgcgcccgg cggtaaaacc acgcatattc tcgaagtggc ccccgaagca
     6961 gacgtgttgg cggttgatat tgatgaacaa cggctctccc gcgtttacga caacctaaag
     7021 cgccttggga tgaaagcgac agttaaacaa ggggatggac gttatcccgc ccaatggtgc
     7081 ggcgagcagc agtttgaccg tattctgctg gatgcgccct gctccgcaac cggcgtcatt
     7141 cgccgtcatc cagatatcaa atggctgcgt cgcgatcgcg atatcgcgga actggcgcaa
     7201 ttacaggcgg aaattcttga tgccgtctgg ccgcgcctga agcccggcgg gacgctggtt
     7261 tatgccacct gttccgtact gccggaagaa aaccgcgatc agatcaaagc ctttttgcaa
     7321 cgcactcccg atgccgcgct cagcgaaacg ggaacacctg atcagccagg acagcaaaat
     7381 ctgccgggcg gcgaagaagg tgatgggttc ttttacgcta agctaatcaa gaagtgatga
     7441 gataacgggc cacgactgat gaaaattatc atactgggcg cagggcaagt tggtggaaca
     7501 ctggcggaaa acctggtcgg cgaaaacaac gacatcacgg tggttgatac caacggcgaa
     7561 cgattacgca gtttgcaaga taagttcgat ctacgcgtag ttcaggggca tggttcgcat
     7621 ccccgcgtgt tgcgcgaagc gggcgctgac gatgcggata tgctggtcgc tgtcaccagt
     7681 tcagatgaaa ctaatatggt tgcctgtcag gtagcctatt cactcttcaa caccccaaac
     7741 cgtatcgccc gcattcgctc cccggactat gttcgcgatg cggataaact ctttcattct
     7801 gaagcggttc cgattgatca tctgatcgcg ccggagcagt tggttatcga taatatttat
     7861 cgtctgatcg agtatccggg agcattacag gttgtaaact ttgccgaagg gaaagtcagt
     7921 ctggcagtag taaaagccta ctatggcggt ccactaatag gtaacgcgct ctcgacaatg
     7981 cgagagcata tgccgcatat cgatacccgc gttgccgcaa ttttccgtca tgacagacca
     8041 atccgtcctc agggctcgac tatcgtggaa gcaggggatg aagtcttctt tattgcggct
     8101 tcacagcata tccgtgcagt aatgagcgaa ttacagcgtc tggaaaaacc ctacaagcgc
     8161 atcatgctgg tgggcggcgg caatatcggc gccgggctgg caaggcgtct ggaaaaagac
     8221 tatagcgtta aattgatcga acgcgatcaa caacgcgccg cagaactggc tgagaagctg
     8281 caaaacacga tcgtcttttt tggcgacgct tccgatcagg aattgctggc ggaggagcat
     8341 attgatcagg tcgatctctt tatcgcagtc actaacgatg acgaagccaa tatcatgtcc
     8401 gcgatgttgg ctaagcggat gggcgccaaa aaagtgatgg tgctgattca gcgtcgagct
     8461 tatgtcgatc ttgtgcaggg tagcgttata gatattgcga tttctccgca gcaggccacc
     8521 atctctgcat tactgagcca tgtgcgtaaa gcagatatcg tcggcgtttc ctcactacgt
     8581 cgcggggttg ccgaagccat cgaagccgtc gcgcacggcg atgaaagcac ttcccgcgtg
     8641 gttggccgcg tcattgacga aataaaactg ccgccaggca ccattattgg cgcggtcgtt
     8701 cgcggtaatg atgtcatgat tgctaatgac aatttgcgca ttgaacaagg cgatcacgtc
     8761 attatgtttt tgaccgataa aaagtttatt accgacgtcg aacgtctgtt ccagccaagt
     8821 cctttcttcc tctaatttaa ggggcgctca ttcagcgccc tttttaattc cctttattta
     8881 tcaaggttta atttatttcg ctaaacagaa gccgtaaatg gaaaatgcct tagcatttgt
     8941 taaacttata acgtcagctg catagggaga ataaaaatga gttttattaa agaattccgc
     9001 gaattcgcga tgcgcgggaa tgttgtggat ttggcagtgg gtgtcattat tggcgcggca
     9061 ttcggtaaga ttgtttcttc actggttgcc gatatcatta tgccgccgtt gggattgtta
     9121 atcggcggga tcgactttaa acaatttgct tttacgttac gcgaagcgca gggagatatt
     9181 ccggcggtcg tcatgcatta cggcgtgttt atccagaacg tatttgattt tgtgattgtg
     9241 gcgtttgcta tctttgttgc cattaagctt atcaacagac tcaaccgtaa aaaagcagaa
     9301 gagccggcag ctccgcccgc gccttctaaa gaggaagtgt tattgggcga aatccgcgat
     9361 ctgctgaaag aacaaaataa ccgttcttaa taagcagaag gccagtggta aaaaagtcac
     9421 ttactttctt gccactggcc tcccagttcc cccggttacc gtgtttacct ttacgcagat
     9481 aacttccttt gcctttctta tttttttcaa cgcgttgcct gaaaagggga tcgtgtaaca
     9541 atgcctcgat ggcattgtcc tttatctgcc ctttcttatg ttgataacga ctcataatat
     9601 ctcccgtttg tataaattat acggcgcgag tgtagtcccg ccggttcaat aaatcaacat
     9661 actgatttcg ccccactggc cccctgttcc agggcttcca gaatggaaca atagacgcta
     9721 ctgtgggccg ttccgcaaca agcatcatta agcctttgta acgaacgctg catcgtttgc
     9781 agttccgcaa tcctggcttc aacctcctgc aatcgttctt gcacaatact ttttgactcc
     9841 tgacaggtat ggtgctcagg atcaattctg atcgataaaa gttcgcggat cgactcaagc
     9901 gtgaaaccca actgccgcgc ataacgaata aacttgagac gctgcagatc gttttcggta
     9961 tacagacgaa acccgccttc agtacgtacc tcatgatcca tcatctgctg tttttcatag
    10021 tagcgaatgg tatcaggcgt tacgtctgcc agctttgcca gctcaccaat gcgatacata
    10081 caagctccgt taattatcgt tgattttatg cagcagtttt tctgcatact caccgtgtaa
    10141 aaaatcggta ctcaacccag cctgccgaag ttttagttca agcagcgaga gctggcgact
    10201 aacctgatgg tattgagggt catcttcccg gatactgttg aggatatcaa gtaactgaat
    10261 agcgtctctg cgctgctcca gttcaggggg aagacagccc gcattcttca gtaagcgata
    10321 acccgcacga agttccgctg gcacatgaga atcatcatcc agaataagcg gttcgccgcg
    10381 gccaggcaga ttatcaaact cgcctttacg ctgtgcctcg ataatatgac gctctgccca
    10441 ctggtcaagt aaccacatac gtcgctccag ggattgaacg aaaagaatac aattattgta
    10501 gatatgtggg gttcaggagg atataaaaaa acccgccgaa gcgggttttt tacgttacta
    10561 cagattactc tgcagcagct tctgttttct ctgaacgatc aaccagctcg atgtatgcca
    10621 tcggcgcgtt gtcgcctgca cggaagccac acttcagaat gcgagtgtaa ccaccggcgc
    10681 ggctcgcgaa acgcgggccc agctcgttaa acagttttgc cacgatctcg ttatcacgag
    10741 tacgggcgaa tgccagacga cgattagcaa cgctatcagt cttggcaaga gtaatcagcg
    10801 gctcaactac gcgacgcagc tctttcgctt taggcagggt cgtcttgatg atttcatgac
    10861 gaaccagtga acctgccatg ttgcggaaca tagcctggcg atggctgctg ttgcggttca
    10921 gttgacgacc actcttacga tggcgcatga ccttatcctt ctcagtaaaa ccttaacctg
    10981 tgatccggtt actcgtcagc gatgcttgcc ggtggccagt tttccaggcg catacccaga
    11041 gacagtccac gggaagccag cacgtcttta atctcggtaa gagatttttt acccaggtta
    11101 ggcgtcttaa gaagctcaac ctcggtacgc tgtaccagat caccgatata gtggatagct
    11161 tctgccttga ggcagttagc agagcggaca gtcaattcca gatcgtcaac agggcgcagc
    11221 aggatcggat cgaattctgg tttctcttct ttcacttccg gttgacgtac atcacgtaaa
    11281 tcaacgaaag cttccagttg ttcagccagg atggttgccg cacgacgaat cgcctcttca
    11341 ggatcgattg tgccgttggt ttccatttcg atgaccagct tgtccaggtc ggtacgctgt
    11401 tctacacgcg ctgcttcaac attgtaggca atacgctcta cagggctgta gcaggcgtcg
    11461 accagcagac ggccgattgg gcgctcatct tcttccgaat gaattcgggt agaagccggc
    11521 acataaccac gaccgcgctg aactttgata cgcatactaa tagacgcgtt ttcatcggtc
    11581 aggtggcaga tcacgtgctg cggcttgacg atttcgacat ccccatcatg ggtgatatcg
    11641 gctgcagtca cagggccaat gccagattta ttcaaggtaa gaataacttc atctttaccc
    11701 tgaactctca ccgccagccc tttcaggttg agcaggattt ccaggatgtc ttcctgaacg
    11761 ccttctttgg tgctgtactc atgtagtaca ccatcaatct caacctcggt caccgcgcaa
    11821 cccggcatcg atgagagcag aatacggcgc agtgcgttac ccagagtatg gccgaagcca
    11881 cgctctaaag gctcaagggt caccttggcg tgcgtcgaac tcacttgctc gatatctacc
    11941 aggcgcggtt ttagaaactc tgtcacagaa ccctgcattg tgtcctctct ttggtactaa
    12001 gctttacttg gagtaaagct cgacgatcag gtgttcgtta atgtccgcag acagatcaga
    12061 acgctcaggc ttacgcttgt acgtaccttc catcttgcca gcatcaactt ccagccaggt
    12121 tggcttttca cgctgctcag ccagctccag agcggctttc acgcgagact gcttcttcgc
    12181 tttctcacga atgctaacaa cgtcattcgg actaacctga taagaagcga tgttaacaac
    12241 acgaccgttt accataattg ctttatggct aaccagctga cgtgcttctg cacgagtggc
    12301 gccgaagccc atacggtata caacgttgtc cagacgacct tccagcagag ccaacaggtt
    12361 ttcaccggtg ttgcctttca gacgtgctgc ttctttgtag tagttacgga actgacgctc
    12421 cagcacaccg taaatgcggc gaactttttg cttttcacgc aactgcacac catagtcaga
    12481 cagacgcggc ttacgcgcac cgtgctggcc aggagcttgt ccaattttac acttggtatc
    12541 gatcgcgcga acgccagact taaggaataa gtcggtgccc tcacgacggc tcagcttgag
    12601 cttaggaccc aaatatcttg ccattttctt tctccaacta acctggaaaa cgaagcgtta
    12661 tacgcgacgt tttttcggcg gacgacaacc gttatgaggg atcggagtca catcagtaat
    12721 attagtgatg cggaaaccag cggcgttcag agcacgaata gtagattcgc ggcctggacc
    12781 cggaccttta accataactt ccagattctt gataccgtat tctttcacgg cgtcagcgca
    12841 acgctctgct gcaacctgag ctgcaaacgg agtggatttg cgagaaccac ggaaaccgga
    12901 accaccggct gttgcccaac ccagcgcatt accctgacga tcggtaatag tcacgatggt
    12961 gttgttgaaa gaagcatgga tatgagccac gccgtcagag acttgttttc ttacacgttt
    13021 acgtgcgcaa actggtgcct ttgccattat tcaatcaccc cgattatttc ttgatcggtt
    13081 tgcacggacc cttacgggta cgagcgttgg tcttggtacg ctgaccgcga accgggagac
    13141 cacgacgatg acgcaaaccg cgatagcaac caagatccat caggcgcttg atgctcatgc
    13201 tgatttcacg gcgcagatca ccttcaacga caaatttggc aacttcgtca cgcagcgtgt
    13261 cgatttgttc ttcagacagc tcactgatct taacattttc agcgataccc gctgcagcca
    13321 ggatggcttt agaacgggtc ttgccgacac cgtagatcga agttaacgcg atcacggcgt
    13381 gtttctgatc aggaatgtta atgcctgcta tacgggccac tatgcactcc tactatttaa
    13441 tatgtacgta ccatgctgaa aagcccgttt tcaggatact caaatggaaa cgtacagaca
    13501 tacaaaagat tggctggcta atctagccag ctcaacccaa ctttgcaaga aaaatatgcg
    13561 aaaaaatcag ccttggcgct gtttatgctt cggctcggca ctgcaaatca cacggatgac
    13621 accatcacgc ttaacgattt tgcagttacg gcataatttc ttgacggaag cacgaacttt
    13681 catttttact ctccgtaact tctcaggcga ccaattaacg gccgtagcct ttcaggttcg
    13741 ccttcttcaa tgcagactca tactgactgg acatcatcag agtttgcact tgagccataa
    13801 agtccataat cacgacaaca acgataagca gtgaggtccc accgaagtag aacggcactt
    13861 tcattgcatc acgcatgaac tccgggatca ggcagataaa ggtaatatac agcgcaccaa
    13921 ccagggtcag gtgggtcatt actttatcga tatacttcgc cgtttgctct cccggacgaa
    13981 ttcctggtac aaatgcaccg gacttcttca ggttatctgc tgtttcacgc gggttgaaaa
    14041 ccaacgccgt gtagaagaaa cagaagaaga tgattgcaga cgcatagagt aacacataaa
    14101 gcggttgccc aggctgcaaa tacagcgaaa ttgttgtcag ccagttccaa ccagtaccgc
    14161 ccccgaacca tgacgctatg gtcgccggga acagaataat actggaagcg aagattgccg
    14221 ggattacccc cgccatattc actttcagcg gtaaatgtgt gctctgtgca gcatagacac
    14281 gacgaccttg ctgacgtttg gcgtagttta ccacaatacg gcgttgacca cgttcaacga
    14341 atactacaaa gaacgtcact gcaaatacta atactgcaac caacagcaac acgaggaagt
    14401 gcaggtcgcc ttgacgcgct tgctcgatag tatgggcaat ggctggcggg agtcccgcaa
    14461 cgataccagc gaagatgatg attgagatac cgttaccgat accgcgctca gtaatctgtt
    14521 cgccgagcca catcaggaac atggtccctg taaccagact tacaacagcg gtgaaataga
    14581 atgcaaagcc tggattcatc accaggccct gcataccagg catattcggc aaaccggtag
    14641 caataccgat cgactggaat atcgccagca ccagagtacc gtaacgggtg tactggctga
    14701 tcttacgacg accagactcc ccttctttct taatttctgc gagcgttgga tgaaccaccg
    14761 tcaacagctg gataatgatc gacgccgaaa tatacggcat gatccccagg gcaaagatag
    14821 aagcacggct gagagcacca ccagagaaca tgttaaacat ttcaatgatg gtgcctcgct
    14881 gttgctcaag cagtttggca agtacagcgg catcaatacc agggatcgga ataaaagagc
    14941 caatacggaa cacaatcagc gcgccgataa caaacagcag tctgcgtttc agctcaccta
    15001 agccaccttt ggcactttga aaatctaatc ccggttgttt agccatctgc tacttattcc
    15061 tcgattttac cgccagcagc ttcgatagca gcacgagcgc ctttagtaac acgcaggcca
    15121 cgaacagtta ccggagtagt gacttcgcca gccaggatca ctttcgcgaa ctcgatctgg
    15181 ataccgataa tgtttgccgc tttcagcgtg ttcaggtcta caacgccgcc ttctactttc
    15241 gccaggtcag acagacgaac ttcggctgta atcgctgctt tgcgagaagt gaagccgaat
    15301 ttcggcagac gacggtacag aggcatctga ccaccctcga aaccgcgacg tacgccaccg
    15361 ccagaacgag acttctgacc tttgtgacca cgaccaccgg ttttaccgag gccagaaccg
    15421 ataccacgac ccaggcgttt acccgccttt ttggagcctt cggccggaga cagagtattt
    15481 aaacgcatct cttactcctc aactttaacc atgaaggaaa ccgcgttgac cataccacga
    15541 acagcaggag tatcctcgcg ctctacggtg tggccaatac gacgcagacc caggccaagc
    15601 agcgttgcct tgtgtttcgg cagacgaccg attgcactgc gggtttgagt aattttaata
    15661 gtctttgcca tggtttattt ccccagaatt tcttcaacgg atttaccacg cttggcagcg
    15721 accatttctg gagaattcat attttccagg ccatcaatag ttgcacgaac cacgttgatc
    15781 gggttggtgg aaccgtatgc tttagccaga acgttatgaa ccccagcaac ttccagaacg
    15841 gcgcgcattg caccaccggc gatgataccg gtaccttcgg aagctggctg catgaataca
    15901 cgagaccccg tgtgaacacc tttaaccggg tgctgcaggg tgccgttgtt cagcgcgacg
    15961 ttaatcatat tgcgacgggc tttttccatc gctttctgga tcgctgctgg aacttcacgc
    16021 gctttaccgt aaccaaaacc tacgcgaccg ttaccatcgc ctactacagt cagagctgtg
    16081 aaggagaaaa tacgaccacc tttaacggtt ttagatacgc ggtttaccgc gatcagcttt
    16141 tcctgcagtt cgccagcttg tttttcgatg tgagccatct tacacctcta ccttagaact
    16201 gaaggccagc ttcacgggca gcatctgcca gtgcctggac acgaccatga tattggaacc
    16261 cggaacggtc aaaggacaca tctttgatgc ctttttccag agcgcgttca gcgacagctt
    16321 tacccacagc tgcagccgca tctttgttac cggtgtactt cagttgttca gcgatagctt
    16381 tttctacagt agaagcagct accagaactt cagaaccgtt cggtgcaatt acctgtgcgt
    16441 aaatatgacg cggggtacga tgtaccacca ggcgagttgc gcccagctct ttgagcttgc
    16501 ggcgtgcgcg ggtcgcacga cggatacgag cagatttctt atccatagtg ttaccttact
    16561 tcttcttagc ctctttggta cgcacgactt cgtcggcgta acgaacaccc ttgcctttgt
    16621 aaggctcagg acgacggtag gcgcgcagat ctgctgcaac ctggccgatc acctgcttat
    16681 cagcgccttt cagcacgatt tcagtttgag tcggacattc agcagtgata cctgccggca
    16741 gctgatggtc aaccgggtga gagaaaccta aagacaggtt tactacattc cctttaaccg
    16801 ctgcacgata acctacacca accagctgca gcttcttagt gaagccttcg gtaacaccga
    16861 taaccattga gttcagcagg gcacgcgcgg taccagcctg tgcccaaccg tctgcgtaac
    16921 catcacgcgg accgaaggtc agtgcattat ctgcatgttt aacttcaaca gcatcgttga
    16981 gagtacgagt cagctcgccg tttttacctt tgatcgtaat aacctgaccg ttgattttga
    17041 catcaacgcc ggcaggaaca acgaccggtg ctttagcaac acgagacatt ttttcctccg
    17101 attaggctac gtagcagata atttcgccac caagaccagc ctggcgcgct gcacgatctg
    17161 tcataacacc tttagaggta gaaacaactg cgatacccag accggccata actttcggca
    17221 gctcatcttt acgtttgtag atgcgcaggc ctgggcggct gacacgctga atgctttcta
    17281 caacagcttt accctggaaa tacttaagag tcagttccag ttccggcttg gtgtcgcctt
    17341 caactttaaa atcttcaata aaaccttctt ccttcagcac gttggcaatt gccactttca
    17401 gcttagagga aggcatggtg accgcagctt tgttcgcggc ctgaccgtta cggatacggg
    17461 tcagcatatc cgcgatcgga tcttgcatgc tcatctgtct ttactcccgt gattcaattg
    17521 gtgacaatta ccagctagcc tttttcagac ccggaatttc accgcgcata gcggcttcac
    17581 ggaccttaat acggctcaac ccgaacttcc gcaggaaagc gtgcggacga ccagtttgac
    17641 ggcagcggtt acgctgacgt gacgggctgg aatcacgcgg cagagtctgc agcttaagaa
    17701 ccgcattcca acgatcttcg tcggttgcgt tcacatcaga gatgatcgct ttcagttcag
    17761 cgcgtttcgc gaagtattta tcagctaaag ctacgcgttt tacttcgcgt gctttcattg
    17821 attgcttagc catttagtaa ccctacctta cttgcggaac gggaagtcaa aggcagccag
    17881 cagagcacgg ccttcttcgt cagatttcgc agtagtggta atggtaatat ccaaaccacg
    17941 aacgcggtcg actttatcgt agtcgatttc tgggaagatg atctgctcac ggacacccat
    18001 gctgtagtta ccacgaccgt cgaatgactt agcggacaag ccacggaagt cacggatacg
    18061 aggaacagca atagtgatca ggcgctcaaa gaactcccac atgcgttcgc cacgcagagt
    18121 tactttacag ccgatcggat agccctgacg gattttgaag cctgcaacag atttgcgtgc
    18181 tttggtgatc aacggttttt gaccggagat tgctgtcagg tctgctgctg cgttatccag
    18241 cagtttcttg tcagcgatcg cttcaccaac acccatgttc agggtgatct tctcgacccg
    18301 agggacttgc atgacagaat tgtagttaaa ctcagtcatg agtttgttaa ctacttcgtc
    18361 tttgtagtaa tcatgcagtt tcgccatcgt actactccaa attacttgat agtttcgctg
    18421 ttagacttga agaaacggac ttttttgccg tcttcgaatc taaagcctac acggtcagcc
    18481 ttgccggttg ccgtattgaa gattgcaacg ttagaaacct gaattgcagc ttctttttca
    18541 acgatgccgc ccggttggtt cagagccgga accggcttct ggtgtttctt aaccaggttg
    18601 ataccttcaa caatgacctt gccggaagac aggacattct taactttacc gcgtttacct
    18661 ttatctttac cggttaacac gataacttcg tcatcacgac ggattttcgc tgccatgatt
    18721 cgctccttag agtacttctg gtgccagaga gataattttc atgaacttct cgttacgaag
    18781 ttcacgagtt accggcccaa aaatacgcgt accgataggc tgctcgctgt tattgtttaa
    18841 aataacgcat gcattaccat cgaagcgaat gacagaaccg tccgggcgac gaacaccctt
    18901 cttggtgcgc accactaccg ccttcagcac atcacctttt ttgaccttac cacgcggaat
    18961 cgcttctttg atggtgatct taatgatgtc gcctacgcct gcgtagcgac ggtgcgagcc
    19021 acccagaacc ttgatacaca ttacgcgacg tgcaccggag ttgtcggcga cgttcagcat
    19081 agtctgttct tggatcattt tagtgctccg ctaatgtcaa ctactactga gacccgaaaa
    19141 tcaggtcgtt aaaaaaaccc catatcgagg gcgcggcatt ataacaccgc aaatcagata
    19201 tgggtagaaa aaataaacgg cccatcgctg agccgtttat tcgttgagaa tgcgtactgt
    19261 attacagaac cgctttctct acaacgcgaa ccagagtcca ggatttggtc ttggacagcg
    19321 gacggcattc gcggatttca accacgtcgc cgataccgca ttcgttgttc tcgtcatgta
    19381 cgtgcatttt ggtcgtacgc ttgatgaatt taccgtagat cgggtgtttc acaaaacgtt
    19441 cgatagcaac aacaatggat ttctccattt tgtcgctaac cacgcgacct tgcagagtac
    19501 ggattttatc ggtcattacg cacccgcctt ctcagtcagt aaagtcttaa cgcgtgcgac
    19561 atcacgacgc acttgcttca acaggtgaga ctgttgcagc tggccacttg cagcctgcat
    19621 acgcaggttg aactgctcac gcagcaggtt cagtagctcg gtgttcagct cttcaacgct
    19681 cttctcacgc agctcttttg ctttcattac atcaccgtct tagttacaaa ggtggtttta
    19741 atcggcagtt tcgctgctgc cagcttgaat gcttcacggg ccagctcttc cggtacgccg
    19801 tccatttcat acaggacttt acccggctga atcaaggcaa cccaatactc cacgttacct
    19861 ttacctttac ccatacgcac tgccagcggc ttttcagtga tcggtttgtc cgggaataca
    19921 cggatccaga tcttaccttg acgcttaact gcacgggtca tagcacgacg tgctgcttcg
    19981 atctgacggg cagtcagacg accacggcca acagctttca ggccgaagct gccgaagcta
    20041 acatccgcgc ctgcagccag accacggttg cggcctttgt gcattttacg gaattttgta
    20101 cgctttggtt gtaacatcag cgacgctcct tatttacggc ctttacgctg ctgctttttc
    20161 ggttgagcag ccggtttttc cggttgttca acagcagcca taccacccag gatctcgcct
    20221 ttgaagatcc acactttaac gccgattaca ccataagtgg tgtgcgcttc agaggtgttg
    20281 tagtcgatgt cagcacgcag agtgtgcagc ggtacgcgac cttcgcggta ccattcggta
    20341 cgtgcgattt ccgcgccgcc cagacggccg ctaacttcaa ctttgatacc tttagcgccc
    20401 agacgcatgg cgttctgtac agcacgcttc atcgcacgac ggaacataac gcgacgttcc
    20461 agctgagaag tgatgctgtc agcaaccagt ttagcgtcca gttcaggttt acgaacttcg
    20521 gcgatgttga tctgtgcagg aacgccagcg atatccgcta cgaccttacg cagtttttct
    20581 acgtcttcac cttttttacc gataacgata cccgggcgag cggtgtgaat agtcacacgg
    20641 atgctcttag ccggacgctc gataacgata cgagatacag acgctttagc cagttccttc
    20701 gtcaggtact gacgtacttt aaaatcgctg tccaggttgt cagcgaattc tttggtgttc
    20761 gcaaaccagg tagagttcca tggttttaca atacccaggc gaataccatt aggatgtact
    20821 ttctgaccca ttgctagtct ccagagtctc agcgatcgga cacaaccaca gtgatgtggc
    20881 tggtgcgctt caggatgcga tctgcacgac cttttgcacg cggcataatg cgcttcatgc
    20941 tcgggccttc gtctacgaaa attttcgtaa ctttcagatc gtcaatgtca gcgccatcgt
    21001 tgtgttcagc gttagcaatg gcagattcca gaactttctt gaccagtaca gccgctttct
    21061 tgttggtgta ggtcagaata tccagagcct gcgacacttt cttaccgcga atcaggtcag
    21121 caacaaggcg aaccttctga gcagaagaac gagcatggcg atgtttagcg atagtttcca
    21181 tctcttcctc ctaccttatt tcttcttcgc ttttttatca gcagcgtggc cgcgataagt
    21241 acgagtcggt gcgaattcac ccagtttgtg accgaccatt tcgtcggaaa caaataccgg
    21301 aacgtgctga cgaccattat ggacagcgat ggtcaaaccg atcatgttag gaaagatcgt
    21361 tgaacgacgg gaccaagtgc gcaggggctt cttgtctccg ctttccaccg ctttctctac
    21421 cttcttcagc aagtgcaggt caataaaagg acctttcttg agagaacgtg gcatggctta
    21481 tcctctaaaa ttatttgcta cggcgacgta cgatgaattt atcagtacgc ttgttgctgc
    21541 gggtcttctt acctttggtc tgaacgcccc acggagttac cgggtgctta ccaaagttac
    21601 gaccttcacc accaccatgt gggtggtcta ctgggttcat cgcagtaccg cgaacggtag
    21661 gacgaacgcc acgccagcgt gcagcacctg ctttacccag aacgcgcagc atatgctcag
    21721 cattgccaac ttcgcccagg gttgcacggc agtctgcttc gactttacgc atttcaccag
    21781 aacgcagacg cagggtgaca taagcgccat cgcgagcaac gatctgaacg taagtaccag
    21841 cggaacgcgc cagctgaccg cctttacctg gtttcatttc tacgttatga acggtagaac
    21901 caaccgggat attgcgcatc ggcagggtgt tgcctgcttt gattgcagca tcaacgccag
    21961 actgaatctg gtcgccagct ttcaggcctt tcggggccag gatgtaacgg cgttcgccgt
    22021 ctttgtacag aaccagcgcg atgttcgcgg aacggttcgg atcgtactca agacgttcaa
    22081 caactgccgg gataccgtct ttgttgcgtt tgaagtcaac aatacgataa gcctgtttgt
    22141 gaccaccacc gatatgacga gtggtgatac ggccattgtt gttacgacca ccggatttgc
    22201 tgtttttttc aaccagcgga gcaaaaggtt tgcccttgtg cagctctggg ttgaccactt
    22261 taacgacgtg gcgacgaccc ggagatgtcg gtttacattt aacaactgcc attgtattac
    22321 tcctccgact tactcagcgc cgccgacgaa gtccagattc tggccttctt tcagggtgac
    22381 gtaagctttt ttccagtcgc tacgacgacc gatacgctgt ccgtgacgtt taactttccc
    22441 tttaacgacc agggtgttaa cgacttcgac ttcgacttca aacagtttct gcacagcagc
    22501 tttgatttct gctttggtcg cgtctttagc aactttgaga acgatggtgt tggttttttc
    22561 catcgcagta gacgcttttt cagaaacgtg cggtgcgcgc agcaccttca gcagacgttc
    22621 ttcacgaatc atgccagcat ctcctcaact tgcttaacag catcagcagt cattacgact
    22681 ttgtcgaagg cgatcaggct aaccgggtcg ataccagtcg catcgcgtac gtcaaccttg
    22741 tgcaggttac gtgcggccag gaacaggttc tcgtccagct caccggtgat gatcagcaca
    22801 tcttccagag ccatgtcttt cagtttctgt gccagcagct tagttttcgg cgcttctaca
    22861 gagaacttct cgacaacgat cagacgatcc tgacgtacca gttcggacag gatgcttttc
    22921 agcgcgccgc ggtacatctt cttgttaact ttttgactgt ggtcctgcgg acgagcagcg
    22981 aaggtcacgc caccggaacg ccagatcggg ctcttgatag aacctgaacg cgcacggcca
    23041 gtgcctttct ggcgccacgg ttttttaccg gaaccagtta cttcagcacg agtcttctga
    23101 gcacgagtac cctgacgagc accagctgca taagcaacaa caacctggtg aaccagcgct
    23161 tcgttgaaat cacgaccgaa ggtagtttcg gaaacagtca gcgcgctctg cgcgtctttc
    23221 aatactaatt ccattgctat ccccttacgc cttcacagct ggtttaacga tcaggtcgca
    23281 accggttgca cccggaacac cacccttaac cagcagcagg ttgcgctcag cgtcaacgcg
    23341 tactacgtca aggctctgaa cggttacgcg ctcattaccc atctgacctg ccattttctt
    23401 gcctttgaac actttgcccg gagtctggtt ctgaccgata gaacccggaa cgcggtgaga
    23461 caaggagtta ccgtgagtag cgtcctgggt acggaagttc cagcgcttaa cggtaccagc
    23521 gaaaccttta cctttagagg taccggttac gtcaactttt ttaacgtcag caaacagttc
    23581 aacgctgatg ctctgaccta cggtgtattc ttcgccttca gccagacgga attcccacag
    23641 accacggcca gcttctacgc cagctttagc aaagtgaccc gcttccggct tggtgacacg
    23701 gttagctttt ttagcacccg tagtaacctg aacagcgcgg tagccatcgt tagccaggtc
    23761 tttaacctga gtaacacggt ttgcttcaac ttcgattacg gttactggga tagagacgcc
    23821 atcttcagtg aagatgcggg tcatacccac ttttttaccg actaaaccaa tcattgtatc
    23881 aacctctcaa tcgctcgatg acctgattaa cccaggctga tctgcacgtc tacaccggca
    23941 gctaggtcca gacgcatcag agcatcaacg gttttctcgg ttggctcaac gatgtcaacc
    24001 agacgcttgt gagtgcgaat ttcgtactga tcgcgcgcat ctttgttaac gtgcggagag
    24061 atcagaacgg taaagcgctc tttgcgggtc ggcagcggga tcggaccgcg aacctgcgca
    24121 ccagtgcgct tggcagtctc gacgatttcc gcggttgatt gatcgatcag acgatgatca
    24181 aacgctttca ggcggatacg gattctttgg ttctgcatga gaccagagct ccaattattt
    24241 tataaacgaa aatgattact cctcacaccc attacgattg atgggagagt gtaaccgttc
    24301 ttacgtagct ccccgattgg gagcattgtt aaatagccaa atcggctatt cgaggttcaa
    24361 atcgaacctg ccgtcaatta cgacaagccc gcgcattata cgtaaatctc agcctgacgc
    24421 aagtgtcgga tagaaattaa gcgctttatt cttatgcgag catgattcca gatggtacgc
    24481 atgggatggc gacgcgcatc ttttctttgg aaggcatcag gcaaacctgg caatacgtcg
    24541 ttgtcgctgt cgcataaatc tataaaggtg agcacaaacc ttgacgagga tttgcttatg
    24601 tttgttgccc tcccctttct cattttttat gcgtcgttct ctttattact tggcatatac
    24661 gacgcgcgta ccggtctgct acctgaccgg tttacctgtc cattactgtg gggtggtctg
    24721 ctttatcacc agatttgcct gccggagcgt ttaccggatg cgctttgggg cgctatcgcc
    24781 ggctatggcg gattcgcgtt aatttactgg ggctatcgcc tgcgttatca gaaagagggg
    24841 cttggatatg gcgacgtcaa gtaccttgct gccttagggg cgtggcattg ttgggaaaca
    24901 ctgccgttac tggttttcct tgccgctatg ttggcctgtg gcaggtttgg cgtcgcgcta
    24961 ctggtgagag gtaaatcggc attaataaac ccgctacctt ttgggccatg gctggcggtg
    25021 gcgggtttca taacaggttg gaaagttttc tttccagacg gttaatcggt aaccttaatt
    25081 tgtgattgca gataattttg cataccaagt ttggcaatca aatccagctc agtttccagc
    25141 cagtcgatgt ggccttcctc gtcggcaaga atttcaatca tcatatcccg gctgacataa
    25201 tcatgaacgt tatcggcata ggctattgcc tcacgtagat cttttgcgcc ttccagttcg
    25261 agccggagat ccgatcgtag catctcttcg acatcttcac cgatgcccag cttgcccaga
    25321 tcctgtaggt tcggtatgcc ttccagaaat aaaatacgct caatatactt atcggcgtgt
    25381 ttcatctcat caatggattc atggtactca acatcattaa gccgggtcag cccccagttt
    25441 ttgaacatac gggcatgaag aaaatactga ttaattgcga caagctcatt tcccaatagt
    25501 ttattgagat aatttatgat tttaacatca cctttcattt tatagtccct ccgcttccac
    25561 tctctagagc gtagatgggg ctacagggat gtcaaaaaaa agagtgtgac tcaggcgatc
    25621 tctttaaatt ccggcatttg cgttaactca tcctgcatca cttctcgcgc ggcgcgaata
    25681 cacttaccac attgatttcc cacaggaata aatttacgca actgttgaaa tgactgtgga
    25741 tgaaattgtc gtacagcctg gcggattttt ttatcgctta taccattaca caaacaaacg
    25801 tacatgatcg ctcccgttca atttccgcac aaagtgtaaa tgagaatggt tatgattaca
    25861 atagcacaaa gcgatttacg ccacgggaga agcgttaaaa aaggcaaata aatataacag
    25921 cggctaaata gcaggcaaca aaaagggcgc cgaagcgccc tcttcaattc aaaactaatt
    25981 aacgagtaat tagcccagaa ctttagcaac aacgcccgcg ccaacggtac ggccgccttc
    26041 acggattgcg aaacgcagac cgtcgtccat tgcgatcggg tggatcaggg taacaaccat
    26101 tttgatgttg tcgcccggca ttaccatctc tacgccttcc ggcagttcga tggtgccagt
    26161 cacgtcagta gtacggaagt agaactgcgg acggtagcct ttgaagaacg gagtatgacg
    26221 gccgccttca tctttggaca gaatgtacac ttcagattcg aacttggtgt gtggcttgat
    26281 ggtgcccggc ttagccagta cctgaccacg ttcgatttct tcacgtttga taccacgcag
    26341 cagaacacct acgttctcac c
//
LOCUS       DAGWFR010000044        26351 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.045, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000044 DAGWFR010000000
VERSION     DAGWFR010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 26351)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26351)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26351
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.045"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..213)
                     /locus_tag="MOX77_001897"
     CDS             complement(<1..213)
                     /locus_tag="MOX77_001897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461868.1"
                     /note="hemoprotein; NADPH dependent; with the alpha
                     subunit (a flavoprotein) catalyzes the reduction of
                     sulfite to sulfide; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite reductase subunit beta"
                     /protein_id="HCA3357441.1"
                     /translation="MSEKYPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGF
                     KGDNFLLIRFHGMYQQDDRDIRAERAA"
     gene            complement(213..2012)
                     /gene="cysJ"
                     /locus_tag="MOX77_001898"
     CDS             complement(213..2012)
                     /gene="cysJ"
                     /locus_tag="MOX77_001898"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent assimilatory sulfite reductase
                     flavoprotein subunit"
                     /protein_id="HCA3357442.1"
                     /translation="MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGFFWGVL
                     NPRSGAVAVTPAPDGKMPGVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYK
                     FKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEF
                     FCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRACVVDVLKSRAPVAVPSQSV
                     ATGAVNDIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDAL
                     GVWYQNDPALVKELVELLWLKGDEPVMVDGKTLPLAEALEWHFELTVNTANIVENYAT
                     LTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIAS
                     AQAEVESEVHITVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPAN
                     PQTPVIMIGPGTGIAPFRAFMQQRAADGAEGKNWLFFGNPHFTEDFLYQVEWQRYVKE
                     GLLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKAL
                     LEVIAEFGGMDLESADEYLSELRVERRYQRDVY"
     gene            2448..2810
                     /gene="queD"
                     /locus_tag="MOX77_001899"
     CDS             2448..2810
                     /gene="queD"
                     /locus_tag="MOX77_001899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase QueD"
                     /protein_id="HCA3357443.1"
                     /translation="MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEV
                     DPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLL
                     SAVMVKETCTAGCVYRGE"
     gene            complement(2900..3697)
                     /locus_tag="MOX77_001900"
     CDS             complement(2900..3697)
                     /locus_tag="MOX77_001900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HCA3357444.1"
                     /translation="MALRIRVLLENHKGAGTDKSLKARPGLSLLVEDESTSILFDTGP
                     DGSFMQNASAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPNIARERYAAIT
                     FLGITRKIKKLSCEVDYSRYRMMYTCGPLPIGENFIWSGEIPVVAPEAYGIFGGHDAE
                     PDSILDEGVLIYQSTKGLVIIMGCGHRGIANIVRHCQNITGIKRIYALIGGFHLRCAS
                     PFTLWRVRRFLQEQKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF"
     gene            complement(4181..4852)
                     /gene="queE"
                     /locus_tag="MOX77_001901"
     CDS             complement(4181..4852)
                     /gene="queE"
                     /locus_tag="MOX77_001901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001199960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HCA3357445.1"
                     /translation="MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTW
                     DKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLM
                     PLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKH
                     PVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHK
                     YLNIA"
     gene            complement(4988..6286)
                     /gene="eno"
                     /locus_tag="MOX77_001902"
     CDS             complement(4988..6286)
                     /gene="eno"
                     /locus_tag="MOX77_001902"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020456663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HCA3357446.1"
                     /translation="MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTG
                     SREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTEN
                     KSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHA
                     DNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGS
                     NAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHF
                     LEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKG
                     IANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQI
                     KTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA"
     gene            complement(6369..8006)
                     /gene="pyrG"
                     /locus_tag="MOX77_001903"
     CDS             complement(6369..8006)
                     /gene="pyrG"
                     /locus_tag="MOX77_001903"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase (glutamine hydrolyzing)"
                     /protein_id="HCA3357447.1"
                     /translation="MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPY
                     INVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRK
                     ERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQL
                     AVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPA
                     NERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEW
                     EQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVE
                     TRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARN
                     VAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSD
                     DSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPW
                     FVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK"
     gene            complement(8234..9034)
                     /gene="mazG"
                     /locus_tag="MOX77_001904"
     CDS             complement(8234..9034)
                     /gene="mazG"
                     /locus_tag="MOX77_001904"
                     /EC_number="3.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphohydrolase"
                     /protein_id="HCA3357448.1"
                     /translation="MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETY
                     EVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHV
                     FGELSADNSEEALVRWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCSNVGF
                     DWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAEIA
                     LQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL"
     gene            9643..10230
                     /locus_tag="MOX77_001905"
                     /pseudo
     CDS             9643..10230
                     /locus_tag="MOX77_001905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017466162.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
     gene            10314..13010
                     /locus_tag="MOX77_001906"
     CDS             10314..13010
                     /locus_tag="MOX77_001906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017441527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial biogenesis outer membrane usher
                     protein"
                     /protein_id="HCA3357449.1"
                     /translation="MNNTWKSVLCPIACGVGMLLSASPYSASGKDIEFNTDFLDVKNR
                     DNVNIAQFSRKGFILPGVYLLQIKINGQTLPQEFPVNWVIPEHDPQGSEVCAEPELVT
                     QLGIKPELAEKLVWITHGERQCLAPDSLKGMDFQADLGHSTLLVNLPQAYMEYSDVDW
                     DPPARWDNGIPGIILDYNINNQLRHDQESGSEEQSISGNGTLGANLGAWRLRADWQAS
                     YDHRDDDESTSTLHDQSWSRYYAYRALPTLGAKLTLGESYLQSDVFDSFNYIGASVVS
                     DDQMLPPKLRGYAPEIVGIARSNAKVKVSWQGRVLYETQVPAGPFRIQDLNQSVSGTL
                     HVTVEEQNGQTQEFDVNTASVPFLTRPGMVRYKMALGRPQDWDHHPITGTFASAEASW
                     GVTNGWSLYGGAIGESNYQAVALGSGKDLGVVGAVAVDITHSIAHMPQDDGFDGETLQ
                     GNSYRISYSRDFDEIDSRLTFAGYRFSEKNFMSMSDYLDAKTYHHLNAGHEKERYTVT
                     YNQNFREQGMSAYFSYSRSTFWDSPDQSNYNLSLSWYFDLGSIKNLSASLNGYRSEYN
                     GDKDDGVYISLSVPWGNDSISYNGTFNGSQHRNQLGYSGHSQNGDNWQLHVGQDEQSA
                     QADGYYSHQGALTDIDLSADYEEGSYRSLSMSLRGGMTLTTQGGALHRGSLAGSTRLL
                     VDTDGIADVPVSGNGSPTSTNIFGKAVIADVGSYSRSLARIDLNKLPEKAEATKSVVQ
                     ITLTEGAIGYRHFDVVSGEKMMAVFRLADGDFPPFGAEVKNERQQQLGLVADDGNAWL
                     AGVKAGETLKVFWDGTAQCEASLPPTFTPELLANALLLPCKMLEGQPPTAPQKSSPLP
                     AQPLIQEHTQTDGQPAAPVATTTQTPPIPLADNHAVNRKDME"
     gene            13023..13796
                     /locus_tag="MOX77_001907"
     CDS             13023..13796
                     /locus_tag="MOX77_001907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001044456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria/pilus periplasmic chaperone"
                     /protein_id="HCA3357450.1"
                     /translation="MNKTNHFNRQALIATVLLAAPLVSHSAIVPDRTRVIFNGNENSI
                     TVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPPLQRIEPKSDGQVKVQPLPAAAG
                     LPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLT
                     LTYQGDGVIFDNPTPFYLVISNAGSKENETASGFKNLLIAPREKVTSPIKGASLGSSP
                     VVGYVDDYGGHRLLVFTCSGNTCKVNEEKTRDAEKKANK"
     gene            13816..14322
                     /locus_tag="MOX77_001908"
     CDS             13816..14322
                     /locus_tag="MOX77_001908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000178262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HCA3357451.1"
                     /translation="MTMLTRWKILVLLCGGFVTGTEAAGTKTVQLELHLVVTQPPPCT
                     VGGASVEFGDVLTTKVGDVSQTKPVGYSLNCDGRASDYLKLQIQGTTTTISGEQVLQT
                     SVQGLGIRIQQAGNKQLVPVGITDWLNFTLSGSNGPELEAVPVKEPTTQLAGGDFNAS
                     ATLVVDYQ"
     gene            14337..14807
                     /locus_tag="MOX77_001909"
     CDS             14337..14807
                     /locus_tag="MOX77_001909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006667202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HCA3357452.1"
                     /translation="MKRVLILTLLITRFACADNLTFHGKLINPPACTINNGETLEVSF
                     GSVIIDNIDGVNYLTEIPWTLTCDSSFRDDALTFTLSYLGTATPYSAKALTTNVPGLG
                     IELQQNGTVFPPGTSLTINESSLPTLKAVPVKQPGKEPAEGDFEAFATLQVDYQ"
     gene            14804..15340
                     /locus_tag="MOX77_001910"
     CDS             14804..15340
                     /locus_tag="MOX77_001910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001079648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HCA3357453.1"
                     /translation="MNRIFQTTGHLIGGVMLWAVCNTLPAATPNVHYSGKLVAGACNL
                     VVDNDTMATVDFHTIGSDNFDASGQTTPVPFTLSLQDCKTALANGVVVTFQGVEDSTL
                     PGLLALESSSIANGFAIGIETADQHPLIINASQGTEFMLAEGNTIINLQAWLQKTSGE
                     NIMPGEFNASAMVNFEYQ"
     gene            15399..16517
                     /locus_tag="MOX77_001911"
     CDS             15399..16517
                     /locus_tag="MOX77_001911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000403445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357454.1"
                     /translation="MEIKKSILVRKNIRLSGIIIDMLILTILLISTFDAVSDSSPVKA
                     SAINIALQGTPNTDYELNGDLRSNGGIMPKTLYMVCSGGKFSASQADCVAGQWVDIEV
                     VISADSHTFMNLTNMGNLSSSAFQEKRRARCTAKNSNTMDCIWESNFDINLFFSPSTN
                     ISSIERQSLTLHIEPTNNASPSLQQINISGDLIYQPSDYAVYNQGYTPDVLAYVNFYA
                     KYNIVQSSFGTQTGPATGALPGRLNLNGNVATTVSLYPEQLDASFSKTEFSITSASKE
                     FTGSGNNELLAEIYLNYGLQHCQPQTADSICGQILANANVSTSCGDHNITITTNMCNT
                     GNDQCDSDETWKIAEIFGTWGRVNVDTICAITVLLPYE"
     gene            17112..17942
                     /locus_tag="MOX77_001912"
     CDS             17112..17942
                     /locus_tag="MOX77_001912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016505598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357455.1"
                     /translation="MPDGLESTLEFDPSTSFINTTAVDNGITYSFTGEAVKATAHASC
                     TANQATNSAICVWDKSFSLPLTLLTKQNGITINQQNLTVSVIPGGGNNDTNQYSSLSG
                     HIIIDESVSSYTNYEPETSGIENLKLKWTVTVTEDTEGDVGIWNGSLVLNGSPASTLH
                     RYLLPEILDASFSENAIAHSTEVAMTGAKNNVELASVYLYHGNTPCDDTSLCNYSLNK
                     TSVSLVCHDLNAQLNFSNTCNASGTTHCLNGKVGTIKGTWERVNIDTTCAITVLIPYE
                     "
     gene            complement(18389..18685)
                     /locus_tag="MOX77_001913"
                     /pseudo
     CDS             complement(18389..18685)
                     /locus_tag="MOX77_001913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001532579.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
     gene            complement(18651..19007)
                     /locus_tag="MOX77_001914"
     CDS             complement(18651..19007)
                     /locus_tag="MOX77_001914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461876.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system ParD family
                     antitoxin"
                     /protein_id="HCA3357456.1"
                     /translation="MFLTYISFQVYSYVRFILTVEAVMARTMTVDLGDELREFIESLI
                     ESGDYRTQSEVIRESLRLLREKQAESRLQALRELLAEGLNSGEPQAWEKDAFLRKVKT
                     GMIKPDENGKINAKGQ"
     gene            complement(19092..21326)
                     /gene="relA"
                     /locus_tag="MOX77_001915"
     CDS             complement(19092..21326)
                     /gene="relA"
                     /locus_tag="MOX77_001915"
                     /EC_number="2.7.6.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP diphosphokinase"
                     /protein_id="HCA3357457.1"
                     /translation="MVAVRSAHINKAGEFDPKKWIASLGISSQQSCERLAETWAYCLQ
                     QTQGHPDADLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKS
                     IVTLIHGVRDMAAIRQLNATHNDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHL
                     REVKEAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPAEYKRIAKLL
                     HERRLDREHYIEEFVGHLRAEMKNEGVQAEVYGRPKHIYSIWRKMQKKHLAFDELFDV
                     RAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTV
                     EIQIRTKQMHEDAELGVAAHWKYKEGAASGGVRSGHEDRIAWLRKLIAWQEEMADSGE
                     MLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVP
                     FTYQLQMGDQVEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAG
                     RQILDDELAHLGISLKEAEKHLLPRYNFNELEELLAAIGGGDIRLNQMVNFLQSQFNK
                     PSAEEQDAAALKQLQQKTYAPQNRRKDDGRVVVEGVGNLMHHIARCCQPIPGDEIVGF
                     ITQGRGISVHRADCEQLAELRSHAPERIVEAVWGESYSAGYSLVVRVQANDRSGLLRD
                     ITTILANEKVNVLGVASRSDIKQQIATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARR
                     LHGG"
     gene            complement(21378..22673)
                     /gene="rlmD"
                     /locus_tag="MOX77_001916"
     CDS             complement(21378..22673)
                     /gene="rlmD"
                     /locus_tag="MOX77_001916"
                     /EC_number="2.1.1.190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(1939)-C(5))-methyltransferase
                     RlmD"
                     /protein_id="HCA3357458.1"
                     /translation="MAQFYSAKRRVTTRQIITVKVNDLDSFGQGVARHNGKALFIPGL
                     LPEESAEVIITEDKKQFARARVSRRLNDSPERETPRCPHFGVCGGCQQQHVGIDLQQR
                     SKSAALARLMKHEVNDIIAGASWGYRRRARLSLNCPPDKPLQMGFRKAGSSDIVNVEQ
                     CPVLAPQLEALLPRIRACLASLHGTRHLGHVELVQAGSGTLMILRHTAPLSAADKEKL
                     ERFSHSEGLSLFLAPFSEILETVSGEAPWYDSHGLRLTFSPRDFIQVNEAVNQQMVAR
                     ALEWLDVRAEDRVLDLFCGMGNFTLPLATRAASVVGVEGVQALVEKGRENAIRNGLHN
                     VTFFHENLEEDVTKQPWAKNGFDKVLLDPARAGATGVMRHIIKLKPIRIVYVSCNPAT
                     LARDSEALVNAGYEVTRLAMLDMFPHTGHLESMVLFERM"
     gene            22731..25487
                     /gene="barA"
                     /locus_tag="MOX77_001917"
     CDS             22731..25487
                     /gene="barA"
                     /locus_tag="MOX77_001917"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component sensor histidine kinase BarA"
                     /protein_id="HCA3357459.1"
                     /translation="MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDA
                     GASIIEPLAVSSEYGMNLQNRESIGQLISVLHRRHSDIVRAISVYDDHNRLFVTSNFH
                     LDPSQMQLPAGAPFPRRLSVDRHGDIMILRTPIISESYSPDESAIADAKNTKNMLGYV
                     ALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRR
                     GQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQN
                     VELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELNPTQRDHLNTI
                     ERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRNTLDEVVTLLAHSSHDKGLELTL
                     NIKNDVPENVIGDPLRLQQVITNLVGNAIKFTESGNIDILVEKRALSNTKVQIEVQIR
                     DTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNR
                     GSTFWFHINLDLNPNVIIDGPSTACLAGKRLAYIEPNATAAQCTLDLLSDTPVEVIYS
                     PTFSALPLAHYDIMILSVPVTFREPLTMQHERLAKAASMTDFLLLALPCHAQINAEKL
                     KQGGAAACLLKPLTSTRLLPALTEYCQLNHHPEPLLMDTSKITMTVMAVDDNPANLKL
                     IGALLEDKVQHVELCDSGHQAVDRAKQMQFDLILMDIQMPDMDGIRACELIHQLPHQQ
                     QTPVIAVTAHAMAGQKEKLLSAGMNDYLAKPIEEEKLHNLLLRYKPGANVAARLMAPE
                     PAEFIFNPNATLDWQLALRQAAGKPDLARDMLQMLIDFLPEVRNKIEEQLVGENPNGL
                     VDLVHKLHGSCGYSGVPRMKNLCQLIEQQLRSGVHEEELEPEFLELLDEMDNVAREAK
                     KILG"
     gene            complement(25531..>26351)
                     /locus_tag="MOX77_001918"
     CDS             complement(25531..>26351)
                     /locus_tag="MOX77_001918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HCA3357460.1"
                     /translation="TTSWGTGELIRHALDAGVEHIIIGIGGSATNDGGAGMVQALGAR
                     LRDAQGNDIAQGGIGLETLASIDISGLDKRLSACHIEVACDVTNPLTGKEGASAVFGP
                     QKGATPEMIERLDTALTRYAHLIARDLHVDVLDLAGGGAAGGMGAALYAFCGAQLRRG
                     IEIVTDALHLEACLADADLVITGEGRIDSQTIHGKVPIGVANIAKRYNKPVIGIAGSL
                     TADVGVVHEHGLDAVFSVIYTICTLEDALKNASENVRMTARNVAATLKAGQQLR"
BASE COUNT         6649 a         6965 c         6399 g         6338 t
ORIGIN      
        1 cgccgcacgc tcggcgcgaa tatcgcggtc atcctgctga tacatgccat gaaagcgtat
       61 tagcaggaag ttgtcgcctt taaaaccgcc ggtgagaccg tcgttcagat cttccgcaat
      121 ggtaccgcgc aggtagttgc tttccagctt catgcgctcg gcatcggaca gtttaccttc
      181 gaccaccagt gggcctggat atttttcgct cattagtaga catctcgctg ataacggcgc
      241 tctacgcgca gctcacttaa atattcatct gccgattcga ggtccatacc gccgaattca
      301 gcgatcactt ccagcaatgc tttttcgaca tctgcggcca tgcgcctggc gtcgccgcag
      361 acataaatgt gggcgccatc attgatccag cgccacagct ccgcgccctg ttcacgcagc
      421 ttgtcttgta cgtaaatttt ttctttttga tcgcgggacc aggcgagatc gatacggctt
      481 aacagtccct ctttcacgta gcgctgccac tccacctgat agaggaaatc ttcggtaaag
      541 tgcgggttgc cgaagaacag ccagttcttg ccttccgcgc catcggcggc acgctgttgc
      601 ataaaggcgc ggaacggcgc gatgccggtg ccggggccaa tcatgatcac cggcgtttgc
      661 gggttcgctg gcaggcggaa gttatcgtta tgctcaataa agacgcgaac ttcgccctct
      721 tcttccacgc ggtcggcgag gaagctggaa gcgccacccg cgcgggcgcg gccttcgata
      781 tcatagcgaa ccacgccaac ggtgatatgc acttcactct ccacttcagc ctgtgcggag
      841 gcgatggagt acagacgcgg cgtcagcggg cgcagcaggt cgattagcgc ctgagcatcc
      901 agctgcgccg gagagaaacg caccatatca acgatcggcg tggtcgcggc gtaatgctgg
      961 agctgcgctt tgtcacccac taatggcaac agcgactcac tgcgcgtcag ggtcgcgtag
     1021 ttctcaacaa tgttggcggt attcaccgtc agctcgaagt gccactccag cgcttcggcg
     1081 agcggcaggg ttttaccatc aaccatcacc ggctcatcgc ctttcagcca cagcaactca
     1141 accagttcct tcaccagagc cggatcgttc tgataccaga cgcccagcgc atcgcccggc
     1201 tggtaacgca gaccggagtc gcctaaatca atctcaatat gacgaacgtc tttttccgag
     1261 ttgcgaccgg tgattttctg attcacggag agggtcgcgg tcagcggcgc gtctttggta
     1321 taggggctgg tgtggatgtc gtttaccgcg ccagtagcga cggattgcga aggtaccgcg
     1381 acaggtgcac gggacttcag aacatcaacc acgcaggcgc gccattcgct ggcagctgcc
     1441 tgatattcaa cgtcagcatc gacacggtcg agcagacgct caccgcccag ttccgccagt
     1501 ttgctgtcga aatcttttcc ggactggcag aaaaattcat aagaggtgtc gccgaggcta
     1561 aacacggcaa aagcggtgtt ttctagtttc ggcgcttttt tcgagaacag gaacttatgc
     1621 agcgcgacag cctcttccgg cggctcgcct tctccctggg tggacgtcac tatcaccaac
     1681 agtttttcac tggcaatctg tttgaatttg tagtcgccgg cgttcaccag agtcacatta
     1741 aggttggccg ccagcagatc atcacgcagc gcttccgcca cacgacgcgc attgccggtt
     1801 tgcgaagcgg agataagcgt aactcccggc atcttcccat caggagcagg cgtgacggca
     1861 acagcgcctg agcgcgggtt cagtacgccc caaaaaaagc cggagaccca ggcaagctgt
     1921 tcgggagtaa ggtcggttgt cgcggcctga aggcgcgcca gttgctccgg attaagcgga
     1981 agcaacccag tcagtggagc cggtgtcgtc atgcgtcgtt atgttccagt aagcaaagcg
     2041 gatctataca caaaatcatt caagttcgct gtagcccaga ctgtaagctg atcgcgcccc
     2101 aggagcgtac ataaatacgt gactggggcg agtaaacgca gtcaacacaa atgcggcttg
     2161 aaggatgaag tgtataagcg ataaatccca aactaaggat aagggtaacg gtgagaggaa
     2221 taacaattaa agaagggttg gaaataacaa ataaccaaat gaactaacct gttttagtta
     2281 tcgttattaa cgccaaaatc gatttcataa ttgattgata attattaaat tttctggaaa
     2341 ttcttaaatt aattgcccgt tacaaggcgg agaatggttt tagttaatga taaaaaatgc
     2401 gctttccggt accctacagc ggttttttta ttgcctgaga gttcatcatg tccaccacgt
     2461 tgtataaaga tttcaccttt gaagccgctc accgcctgcc tcacgtgcct gaagggcata
     2521 agtgcggccg cctgcacgga cactcattta tggtgcgtct cgagattacc ggtgaagtcg
     2581 atccgcatac cggttggatt atggatttcg cggatctcaa agcggcgttt aaacctactt
     2641 acgatcgtct tgatcactac tatctgaatg atattccagg actgtccaat cccaccagcg
     2701 aagtgctggc aaaatggatt tgggatcagg ttaagcccgt cgtgccgcta ctgagcgccg
     2761 tgatggtgaa agagacctgt acagccggct gcgtctatcg cggcgaataa ggtttattaa
     2821 cgcgtgggct ggatggtaaa ttgattccag cctatccaca cgacgtttta tcagtgaaaa
     2881 cattgcccag cgcgcggtgt taaaagcgca gcacatcacc ggttgcaggt gcggttattt
     2941 ccggtagcca caaccgcccc caggccccgg tacagtgaca accgcatagt ttttcaggtt
     3001 tttgttcttg cagaaagcgc ctgactcgcc acagcgtgaa cggtgatgcg cagcggagat
     3061 gaaatccgcc gataagcgcg taaatccgct ttataccggt aatgttctga cagtgccgga
     3121 caatatttgc gatcccccga tgcccgcatc ccataatgat gactaatcct tttgtcgatt
     3181 ggtaaatcag tacgccctca tccaaaatag agtccggctc cgcatcgtgg ccgccaaaaa
     3241 tgccgtaggc ttcaggcgcg accaccggta tttcccctga ccagataaag ttttcgccaa
     3301 tcggcagggg gccacacgtg tacatcattc ggtagcgtga atagtccacc tcacacgaca
     3361 atttttttat tttccgggta ataccgagaa aagttattgc cgcataacgt tcgcgcgcaa
     3421 tattgggatg gcagatgatt cgactgttat caggaagcca cggcacgccg ccgcaatgat
     3481 cgtaatgacc atgcgaaagc accacagcag acacatcgga caggtcgatc cccatcgccg
     3541 acgcgttttg cataaaactg ccatcagggc cggtatcgaa caagatcgac gtagactcat
     3601 cctcgaccaa caggcttaat cctggccggg ccttcaacga tttatccgtt ccagctccct
     3661 tatgattttc gagcaatacc ctgatcctta acgccatggc cttctcctgt ataaaagcct
     3721 ccccgggaaa acgcggcctt tttactttac aggtttgtag cagccattac tggtacacag
     3781 attatgatta tgcaacggct atccttgttg acgtggggaa tactgctaca cgcaaaaatt
     3841 ccagtcgttg gcgcacggtt tatccccgct ggcgcgggga acacactaaa cgtatatcat
     3901 tgtttataaa ctacttttta ttagcaccac attctaccaa cataatagca acaatttaaa
     3961 ttattaaaga acagctaatt tgctgatttt gatgcaaaaa agttcataga atgatttttt
     4021 ctttaaattt accaaaataa cgtgatccgt gcatcgctat ggaaaaattt atcagcgctt
     4081 ttatacactc atcgaaattc acatagagaa aataaacaat gcaaggtaat ggatgagtca
     4141 cagacggcaa cggcaggccg tccgtaagat taataatgcc tcaggcgata tttaaatatt
     4201 tatgcgtttg catagacagc cgccagttac gcgcaataca cgtttcaata cacagacgcg
     4261 tcgcgtcttc tttctggcta atgggctgca aagcaatcac gcgcggttta tcatcgctca
     4321 acgtggctaa cagttcatcc agcgcctcaa tatcacgaac tcgcccaacg ggatgcttga
     4381 tttcattggc gcgctccagc gcctgggaaa gcacgtcata tcccccgcgc atattcactt
     4441 ttggtgaaac cgtgacccag gtattgggcg tacagcgcac ttcgtgcgtc ccgctggttt
     4501 caatctggca actaaaacca ctcttttcaa gcagatcggt gagcggcatg aggtcgtgaa
     4561 tacagggttc gccaccggtg atgacaacgt gacgcgcggt atagccctga cgattaatta
     4621 ctgccagcaa gtcttcactg ctcgcagcac cccatttgtc gctctctttg gtttttgcca
     4681 gaatgctgaa cagagacact tcccgatcgc tcagtttatc ccaggtatgc ttagtatcac
     4741 accaggcaca gccgaccgga catccctgta aacgaataaa aatagcgggg acgccggtaa
     4801 aataaccctc gccttgtagg gtctggaaca tctcgttaat cgggtactgc atagcgttct
     4861 ctgttaaggg gataatcgtt aattattgca gatttcgtct gcccggtcat gcacagcggc
     4921 tgcgctattg aacagataca aaaaaacccg ccgaagcggg tttatacgtt aagaggtaaa
     4981 agcaggatta cgcctggcct ttgatctctt tacgaccgtt gtacggtgct ttttcgccca
     5041 gagcttcttc gatacgaatc agctggttgt atttagcaac acggtcagaa cggctcatag
     5101 aaccggtttt gatctggcct gcagcggtac caacagccag gtcagcaatg gtagcgtctt
     5161 cagtttcacc agaacggtga gagatgacag cagtgtagcc agcgtctttc gccatcttga
     5221 ttgcagccag agtttcggtc agagaaccga tctggttgaa tttgatcagg atggagttag
     5281 cgatgccttt ctcgatgcct tctttcagga ttttggtgtt ggttacgaac aggtcgtcac
     5341 caaccagctg gattttgtcg cccagtactt tggtctggta tgcaaaaccg tcccagtcag
     5401 actcgtccag accatcttcg atggaaacga tcgggtactg tttggtcagt tcttccagga
     5461 agtgggtgaa ttcttcggag gtgaatgctt tgttgccttc gccagccaga acgtatttac
     5521 cgtctttgta gaattcagat gctgcgcagt ccatcgccag ggtgatgtct ttacccagct
     5581 cgtaaccagc cgctttaacc gcttcagcga taacagccag cgcttcagcg ttggaaccca
     5641 ggttcggcgc atagccgcct tcgtcaccca cagcggtgtt catgcctttg cctttcagca
     5701 cttttgccag gtgatggaaa acttcagaac ccatacggat ggcttcttta accgttttcg
     5761 cgccaaccgg ctggatcatg aattcctgga tgtcgacgtt gttgtcagcg tgctcgccgc
     5821 cgttgatgat gttcatcatc ggaaccggca tggagtattt gcccggcgtg ccgttcagtt
     5881 cagcaatgtg ctcgtacagc ggcatacctt tagcggcagc agcagctttg gcgttagcca
     5941 gagagacagc cagaatggcg tttgcaccga agttagattt gttttcagta ccgtccaggt
     6001 cgatcatgat tttgtcgatg ccagcctggt ctttagcgtc tttgccaaga atagcctgag
     6061 cgatcgggcc gttaaccgcg ccaacagctt tggttacgcc tttacccagg aaacgggatt
     6121 tgtcgccatc gcgcagttcc agcgcttcgc gggaaccagt agaagcacct gacggagccg
     6181 ccgccatacc tacgaaacca ccttccaggt gtacttcagc ttcaacagtc gggttaccac
     6241 gggagtcgat gatttcacga ccgatgactt taacgatttt ggacattagg ttttcctcaa
     6301 gtcactagtt aaactaaaac ttcagacaaa cggtgcaccg ctgagggtgc accgccgttc
     6361 taactttttt acttcgcctg acgtttctga tgctcgttgg cggctttaac aaagccggcg
     6421 aacaacggat gtccatcacg cggcgtggaa gtaaattccg gatggaactg acaggccacg
     6481 aaccacggat gattcggtac ctcaatgatc tcgactaact gatcatcacc ggaacggcct
     6541 gcgacacgca gacccgctgc ttcaatttgt ttcaacaaca tattgttgac ttcgtaacga
     6601 tggcgatgac gttcaacaat cgtcgacgcg ccgtacaact gacgtaccag gctgtcatcg
     6661 ctaagctggc actgctgcgc gcccaggcgc atggtgccgc ccagatcgct tttctcgcta
     6721 cggacttcaa cgttaccgtc ttcatcgcgc cactcggtaa ttaacgccac aaccgggtac
     6781 ttacagtctg gcacaaattc cgttgagttg gcgttgtcca tgccggccac gttacgagcg
     6841 aactcaatca acgcaacctg catccccagg caaatgccca gataaggaat attgttttca
     6901 cgcgcatagc gcgcagtggc gattttacct tcaacgccac gatagccgaa gccgccgggg
     6961 atcaggatag cgtccaaatc tttcagaatt tcgacgccgc gcgtttcaac atcttgcgaa
     7021 tcgatcaatt tgatgttgac ggtaacgcgg tttttcagac caccgtgttt cagcgcttcg
     7081 atcaccgact tataggcatc cggcagttca atatatttgc cgaccatgcc gatagtcact
     7141 tcgcctgccg ggttcgcttc ttcgtaaatg acctgttccc attcagacag gttagcttcc
     7201 ggacagttca agctgaatcg tttacaaata taatcatcaa gcccctgaga tttcaacagg
     7261 cctggaattt tataaatgga atcgacatct ttcattgaaa taacggcttt ttccggcaca
     7321 ttacagaaca atgcaatttt tgcacgctcg ttggcaggaa ccgcacggtc ggaacgacaa
     7381 atcagaatat cgggctgaat accgatagac agcagctctt tcacggagtg ctgagtcggt
     7441 ttagttttca cttcgcccgc agccgccagg taaggtacca gcgtcaggtg cataaacagc
     7501 gcgtgttcac gaccgatatc taccgccaat tgacgaatcg cctcaagaaa cggcagcgat
     7561 tcgatatcac cgacggtacc gccgatttcc accagcacca catcgtggcc ttcgccacct
     7621 tccagcacgc gctctttaat cgcgttagtg atgtgaggga tgacctgtac ggttgcgccc
     7681 agatagtcgc cacggcgttc tttacgcaga acgtcggagt agatacggcc agtcgtgaag
     7741 ttgttgcggc gagacatctt ggtgcggatg aaacgctcgt agtgccccag gtccaggtcg
     7801 gtttcagcgc cgtcttcagt aacgaacact tccccgtgtt ggattgggct catagtaccc
     7861 ggatcgacgt tgatgtacgg atccagtttc atgatggtca cgttgagacc acgggcttcc
     7921 agaatggctg cgagggaggc tgcggcaatg cctttaccca gagaggatac gaccccgccg
     7981 gtcacaaaaa tatagttcgt tgtcatgcgg aacctgagaa gttaggttta aaagacgatg
     8041 gaataaccag gacgggaaag cagtataccc gaacatgacc tacgccacaa actttcatta
     8101 ttcctcctct tcgccaggct gacattcaca cagggaggga gaaaatagcc cctttgaggt
     8161 aaatgttttt gacgtaaatc aagcgcttgt tatttaaaaa atcacacaaa tcgctcttga
     8221 ccgcctaaaa cctttagaga tcaatttcct ggcgttttac ttcctgccaa acttcttcca
     8281 ttgtttccag gtctaccccg gtcatttcca ggcctctggc tgcgacaata cgttcaactt
     8341 cgcgaaaacg acgttcaaat ttatcgttcg ctttttgcaa agcgatctcc gctttcgtac
     8401 ctaaatgacg cgccatgttg accgtggcaa agagcaaatc gcccatttcc tcttccagtt
     8461 tagcctgatc aacaaccgcc tgccgcgcct cgaacatcac ctcatcgatc tcttcataga
     8521 ccttatcgac gaccggcccc agcgtcgtcc agtcgaagcc cacgtttgaa caccgtttct
     8581 ggattttttg cgcgcgcatt aaggccggta agctgcgcgg aatatcgtcc agcgcggaat
     8641 gctgcgcttt ttgcgcgcgc tcttccgttt tgatttgctc ccagcgaact aatgcttctt
     8701 cgctattatc cgcggaaagc tcgccaaaaa catgcggatg gcggcgctcc agcttgtcgc
     8761 tgatggcagc gcaaatatca ttaaaatcga agcggccttc ttcctgcgcc atctgcgcgt
     8821 aaaacaccac ctggaacaac aggtcgccca gttcgccgcg caaatcgtca aaatcctcac
     8881 gcgcaatcgc atccagtact tcataggttt cttccagtgt ataaggcgcg atgctggcga
     8941 aggtctgctc tttatcccac gggcagccgt tttccgggtc gcgcaggcgc tgcatgaggg
     9001 tgagaagacg gtcaatttga tggttagttg tcatggtctt taatcggttg taaatactag
     9061 cgacaattgt aacgtattat tcttaaccat tcacgcacag agacactacg acaacgccta
     9121 tataataaaa tatattgtta acaggtgttg aatgctacct ttcccgtata actttaaaat
     9181 tattaatcga tacacaacaa tataataatc atataactaa tttattaaaa aaaaacagat
     9241 atttgcacta ggcattataa ataacatcaa ttaagtaaaa aaattatgca aacactataa
     9301 gccccccacc caaaagagcc ttccctttca aaaaaaaata aattatttca cttttacgga
     9361 aaaacgagta gcatgcacgc cagtttaata ttcaaaaaag accgcttttt tgttttttct
     9421 gaaacataca tgaaataaat atattgaaag tattacatat aatattctat gaacctgtac
     9481 gaccattctg ttcataagaa tatactcata aaaatgtaga aatataatat tttattatta
     9541 catatttttt acccaaagcc cgcagcatgg ctctatgccg catatccctt gatatacgcg
     9601 tacaaaatgc tgccataaaa cacgttaatt aaggataaca cgatgaagtc atctcatttt
     9661 tgtaaactgg cagtaactgc atctttagtt atgggaattg tctccggcgc tcaagccgcg
     9721 ggtagcaaca cagcaaaggt tactttcctt ggtaatattg ttgattcccc ctgctctgtc
     9781 acattggata cggaagatca aacagtcaat atgggctcaa gtatcggtaa tggcacgctg
     9841 agtaatggta aaacgaccat caacaatgcc cgtacctttc atatcgatct tgagggttgt
     9901 acctaggcta ccgagaaaaa tatgaatgtg gtattcacta caggtagtgg aaccacagcg
     9961 gctacaggcg ccacggataa tctcgcgctg atgaagactg acggcactgg cgctattagc
    10021 aacataagcc tggcaatcgg cgatgcaggc aaaaacaata tcaaactggg cgatacctat
    10081 acacaggcca ttgcggacct ggacagagat accatccttg atgagaagca aagcctgaat
    10141 ttcaccgcct ggctggttgg cgcagcaacc ggcaccgtag gcacaggtga attcagcagc
    10201 gccgccaacg tcactatctc ttacctgtaa ttcagataac agagtcacga cgataaatac
    10261 cctgccgctt taggtagggt attcctgttg agttttattg cggaatatat ttgatgaata
    10321 acacatggaa aagtgttctt tgcccaatag cgtgtggagt gggaatgctt ctaagcgcct
    10381 ccccttatag cgcgtcaggc aaagacatcg aatttaatac cgatttcctc gatgtaaaaa
    10441 atcgcgataa cgtcaacatt gcacagtttt ctcgtaaggg ttttatcctg ccaggcgtct
    10501 accttttaca aattaaaatt aacggacaga ctctgccgca ggaatttcct gttaactggg
    10561 ttattccaga acatgatcca caaggaagtg aggtttgcgc agaaccagaa ttagttacgc
    10621 aattgggtat aaagccggaa ctcgcggaaa aactcgtctg gataacgcac ggtgaacgac
    10681 aatgtctggc gccagattca ctgaaaggca tggattttca ggctgacctg ggacactcca
    10741 cgctgctggt gaatttaccc caggcgtata tggaatacag cgatgtcgac tgggacccac
    10801 ccgcccgctg ggataatggt attcccggca tcattctgga ttacaacatt aataatcagc
    10861 tccgccacga tcaagaaagc ggcagcgaag agcaaagcat cagcggcaac gggacgttag
    10921 gcgcgaacct gggcgcatgg cgactacggg ccgactggca ggccagctac gaccatcgtg
    10981 acgatgacga gagcacttcc accctccacg atcagagctg gagccgctac tacgcctatc
    11041 gcgcactacc gacgctcggg gccaaactta cgctgggcga aagctatctc cagtccgatg
    11101 ttttcgacag ctttaactat atcggtgcca gcgtcgtttc tgacgatcag atgctgccgc
    11161 cgaaactgcg cggctatgcg ccggagatcg tgggcattgc gcgctctaat gcaaaagtca
    11221 aagtctcctg gcaggggcgc gtactgtatg aaacgcaggt gcccgcagga ccgttccgta
    11281 ttcaggatct caaccagtcc gtttccggta cgttgcacgt caccgtggaa gagcagaacg
    11341 gtcagaccca ggagtttgac gttaacaccg catcggttcc cttcctgacg cgccccggca
    11401 tggtgcgcta caagatggcg ctgggccgcc cgcaggactg ggatcatcac cctattaccg
    11461 gcacattcgc ctcggcggag gcttcgtggg gggtcaccaa cggctggtcg ctctatggcg
    11521 gcgcaattgg agaaagcaac tatcaggccg tggcgctggg aagcggtaag gatcttggcg
    11581 tggtgggcgc ggtggcggtg gacattacgc actccatcgc ccacatgccg caagacgacg
    11641 ggtttgacgg cgaaacgctg cagggtaact catatcgcat cagctactcc cgtgactttg
    11701 atgaaatcga cagccgacta acctttgccg gataccgctt ctcagaaaag aactttatga
    11761 gcatgagcga ctatctggat gcgaaaacct atcatcatct caatgccggt cacgaaaaag
    11821 aacgctatac ggtcacctat aaccagaact tccgtgaaca gggcatgagc gcctatttca
    11881 gctactcacg cagtaccttc tgggacagcc cggatcagag taactataac ctgtctcttt
    11941 cctggtactt cgacttaggg tcgataaaaa atctcagtgc gtcgctgaac ggctatcgca
    12001 gcgaatataa cggtgataaa gatgatggcg tctatatctc gctgtctgtt ccctggggca
    12061 atgattccat cagctacaac ggtacgttta acggtagtca acaccgtaat cagctcggct
    12121 attccggcca cagccagaac ggcgataact ggcagcttca cgtcgggcag gatgaacaaa
    12181 gcgcgcaggc agacggttat tacagccatc agggcgcgct gacggacatc gatctgagcg
    12241 cggattatga agaaggatcg taccgttcgc tgagtatgtc gctgcgcggc ggcatgacgc
    12301 tgaccaccca gggcggcgcg ctacaccggg gaagtttagc gggcagcaca cgtttgctgg
    12361 ttgataccga cggcattgcg gacgtccccg ttagcggtaa cggctcgcca acctcaacca
    12421 acattttcgg caaggccgtg attgcggatg tcggaagcta ttcgcgcagc ctggcgcgta
    12481 tcgatctgaa caaattgccg gagaaggcgg aagctactaa gtcggttgtg cagatcacgc
    12541 tcaccgaagg cgccatcggc taccgtcact ttgacgtggt cagcggcgag aaaatgatgg
    12601 cggttttccg gctagcagac ggcgacttcc cacctttcgg cgccgaagtg aaaaacgagc
    12661 gccagcagca gttgggcctg gtggccgatg acggcaacgc ctggctggcg ggcgtaaaag
    12721 ccggggaaac attgaaagtc ttctgggatg gcacggcgca gtgtgaagca tcactcccgc
    12781 ccacgtttac accagagcta ttggccaacg cgctattgct gccgtgcaaa atgctggaag
    12841 gtcagccccc caccgcaccg cagaaaagtt ctccgctgcc tgcgcaaccg ctaatccagg
    12901 aacatacgca aaccgatggc caaccggccg cgccggtggc gacaaccact caaaccccgc
    12961 ccataccgct ggctgacaac catgcggtga atcgcaagga tatggaataa agggaacctg
    13021 taatgaacaa gaccaaccat tttaatcgcc aggcgcttat tgccacggta ttactggctg
    13081 cgccgctggt gtcacacagc gcgattgtgc cggatcgtac ccgcgttatt tttaacggca
    13141 atgaaaattc aatcaccgtc acgctgaaaa acggcaacgc cactctgccc tatctcgctc
    13201 aggcgtggct ggaagacgat aagttcgcca aagatacccg ctattttacc gccctgccgc
    13261 cgctgcagcg tattgagcca aaatccgacg ggcaggttaa agtccagccg ttaccagccg
    13321 cggctggcct accgcaggac cgggaaagtc tgttttattt caacgtgcga gaaattccgc
    13381 cgaaaagcga taagcctaat acgctccagc tggcgctgca aacgcgtatt aagtttttct
    13441 accgcccggt agccgtagcc cggcaggtgg ataagacgca cccgtggcag acgaagctca
    13501 cgctgaccta ccagggcgat ggtgtgatct tcgacaaccc cacaccgttt tacctcgtca
    13561 tcagcaatgc cggtagcaaa gagaacgaga ccgcctccgg ctttaaaaac ctgctgattg
    13621 ccccgcgtga aaaagtgacc tctcccatca aaggtgcctc gctcggcagc tcaccggtgg
    13681 tgggctacgt cgatgattac ggcggccatc gcctgctggt ttttacctgc tcagggaata
    13741 cctgcaaggt caatgaggaa aaaacccgtg acgctgagaa gaaagcgaat aagtaatcct
    13801 gtgcgaaaga gatctatgac gatgttgact cgctggaaaa tactggtgct gctgtgcggt
    13861 ggattcgtta ccggcaccga ggctgccggc acaaaaaccg tgcaactgga gctgcatctg
    13921 gtcgtcactc aaccaccgcc ctgtacggta ggcggcgctt ccgtagagtt tggcgatgtc
    13981 ctgaccacca aagttggcga tgtttctcaa acgaaacctg tgggctacag cctgaactgc
    14041 gatggcagag cgagtgacta tctgaagcta caaattcagg ggaccaccac caccatcagc
    14101 ggggagcagg ttctgcaaac ttcggtgcag gggttaggca tccgtattca gcaggcgggc
    14161 aataagcaac tggttccggt tggcataacg gattggctga acttcaccct gagcggcagc
    14221 aatgggccgg agctggaagc cgtaccggtt aaagagccca ccacgcagtt agcgggtggc
    14281 gattttaacg ccagtgcgac gttagtcgtg gattaccagt gatggagaga ttcatagtga
    14341 aaagggtgct tatcctgacg cttttaatca cccggtttgc ctgcgccgac aatttgacct
    14401 ttcacggcaa actgataaac ccgcccgcct gtactatcaa taatggtgaa acgctggagg
    14461 tcagttttgg tagcgtgatt attgataata ttgacggcgt caattacctg accgagatcc
    14521 cgtggaccct tacctgcgac agcagctttc gcgatgacgc attaactttt acgttgagct
    14581 atctgggcac ggcgacgcct tactccgcaa aagccttaac caccaatgtc cctgggctgg
    14641 gcattgaact tcagcagaac ggcacggtgt ttcctcccgg cacgtcgcta accatcaatg
    14701 agtcatcgct tcccacacta aaagccgtgc cggtaaaaca gcccggtaaa gagcctgccg
    14761 aaggcgattt tgaagctttt gccacgttac aggtggatta ccaatgaacc gtatttttca
    14821 aactaccggg catttgatcg gaggcgtaat gttatgggcg gtttgcaata cgctacctgc
    14881 tgccacgcct aatgtgcact acagcggtaa gctggttgcc ggagcctgta acctggtagt
    14941 ggataatgac acgatggcga cggtggattt tcatactatt ggcagtgaca atttcgacgc
    15001 cagcgggcaa acgactcctg ttccattcac acttagcctc caggattgca aaacagcgct
    15061 agccaacggc gtggtggtga cctttcaggg tgttgaagac agtaccctgc ccggactgct
    15121 ggcgctcgaa tcgtcttcta ttgctaacgg ttttgctata gggattgaga ccgcagatca
    15181 gcacccgtta attatcaacg cttctcaagg tacggaattt atgttggcag agggaaatac
    15241 cattatcaat ctccaggcat ggctacaaaa aacatcaggg gaaaatatta tgcctgggga
    15301 atttaacgcc agcgcaatgg ttaattttga ataccaataa tgttatttaa caaaaaggca
    15361 ttgatgctct ggccagaata aaaaggagtt acaacgcaat ggaaataaaa aaaagcatct
    15421 tggttagaaa aaatatacgc ttgtcaggaa tcatcattga catgctcatt ttaaccatac
    15481 ttttaatcag cacgtttgat gctgtatctg actcttcccc ggtaaaagca agcgctatca
    15541 atattgcact tcaaggaact cccaacacag attatgaatt aaatggcgat ctccgctcta
    15601 acggagggat aatgccaaag acgctttata tggtatgttc aggaggaaaa ttcagtgcaa
    15661 gccaggctga ttgcgttgcc ggtcaatggg tagatatcga agttgtaata tctgcggaca
    15721 gtcatacgtt catgaatttg acaaatatgg gcaatttgag ttcttctgca tttcaggaaa
    15781 aaaggcgtgc tcgctgtaca gcgaaaaata gtaatacgat ggattgtatt tgggaaagta
    15841 acttcgacat taacttgttt ttttcacctt ctacaaacat ctcctcaatt gaaagacaat
    15901 ctctgactct ccatatcgag cctacgaata atgcatcacc ttctctacag caaatcaata
    15961 tcagcggcga cttaatctac cagccttctg actacgcagt gtataatcaa ggatatactc
    16021 ctgacgtctt agcctacgtt aatttttatg ctaaatacaa tatcgtccaa tcaagctttg
    16081 gtacacagac aggcccggcg acgggcgccc tgccgggacg cctcaatctg aacgggaacg
    16141 tagcgaccac agtttcttta tatcctgaac aacttgatgc ctctttttcg aaaacagaat
    16201 tttccatcac atctgccagc aaagaattta cgggttctgg taataatgaa ctactggcag
    16261 aaatctatct aaactatgga ctacagcatt gccagccgca aacggcagat agtatttgtg
    16321 gtcaaatatt agctaacgcg aacgtttcaa catcgtgtgg tgatcataat attactatca
    16381 caaccaatat gtgcaataca ggtaatgacc aatgtgatag tgatgaaaca tggaaaattg
    16441 cagagatctt cgggacatgg ggccgggtta atgtcgacac tatatgcgct attacagtat
    16501 tgcttcccta tgaataatgc ttagaaaaaa tactcggaac cctaaataat ctcgcaaaac
    16561 agtagattac ttatccgaaa aatttttcgg ccttcagtga ggggctctgc tccagttgcg
    16621 cgatcagatc atttaaccaa aataatagtc gaacaaaaga ggcgagccat gaacggctac
    16681 catttctttc gcgagttaag cgaagaatgc tgaaaaaaca gtacagaaaa gtcaggataa
    16741 agagttatac agacggctta ccactatccc aatgctgtat acaggattat tggttagttc
    16801 actttactgc tcctaaaaaa cctgcctcac ttaaaattta gcaaaattat tgaccaagga
    16861 aaacaaatgt gtacaaattt tttaaaaaca tcgctactaa taacatccac tttttggtgt
    16921 attgcgctac aatgcgctga agtaagaacg gatataaaat ataattctca aattatttca
    16981 cagtttgata gtattagcgc actggctggc gatcctacat tcgataccat ccatacccca
    17041 ttaccaacaa acattcatat cctttcatcg tgcactaagt caggtggagg gggggttgta
    17101 ttccaggtac attgcctgat ggacttgaat ccactcttga gtttgatcca tcaacttctt
    17161 tcatcaatac aaccgctgtc gataacggta tcacttatag ttttactggt gaagcggtaa
    17221 aagcgacggc acatgccagc tgtacggcta atcaggcaac taacagcgca atttgtgtat
    17281 gggataaatc attttcactt cccctcacct tacttaccaa acagaacgga ataaccatta
    17341 accagcaaaa tcttacagtt tcggtaatac ccggaggagg aaataatgat actaaccagt
    17401 actcatccct ttccggccat attattattg atgaatcggt aagcagctac acgaattatg
    17461 aaccggaaac atcgggcatt gagaatttaa aattaaaatg gactgtaaca gtgacagaag
    17521 ataccgaagg tgatgtcggt atatggaacg gatcacttgt acttaatggc tctccagcgt
    17581 ccaccctaca tcgttatttg cttccagaaa tattagatgc ttcattttct gaaaatgcga
    17641 tagcgcacag taccgaagtc gccatgactg gcgcaaaaaa taatgtcgag ctagcctctg
    17701 tatatctcta ccatggcaat acgccatgcg atgatacatc cttgtgtaac tacagtctta
    17761 ataagacatc agtttctctt gtatgtcacg atctgaatgc gcaacttaac tttagcaaca
    17821 cttgtaatgc ttcaggcaca acacattgcc tgaacggaaa agtaggtacg ataaagggta
    17881 cctgggagag agtcaacatc gatacaactt gtgcaattac cgttttgata ccctacgaat
    17941 aaacacagga aaaatgatga ccataagcaa aagaatcata atttcattta ttctatttat
    18001 gtgcttcacc aacaatacat ttggatctgg atacgttaag atcaatgccg aattgaatga
    18061 tatggcaggc agaggggtag gcacagtgat ttaaatagta atctacggcg aaggggaaat
    18121 ctttcttttt ggttgtacag ggaacgcttc ggcataccag aaaggaggtc agcccctcac
    18181 gggatagatg aaaaaacaga tccagaatcg cagggcgaaa agagttaatg atgagaacag
    18241 ataaagaatg aagaagctta gatccagact catagctaat tattcataga ataaatacta
    18301 tagtaatgaa taaaattcag aataggtgtt acgtatttca aacacataaa accttaaccg
    18361 atatcacata gagtataact taaaaaggct ataaccaatt tacatgctta ccagcatcct
    18421 gattctggct cagaatacgt atcacgataa cttccgtaac tgattatata aaatagataa
    18481 tatgcctttc aaacggtaag gcataaatgt attcacccag ttcaggtcga ggcgtgccaa
    18541 tgttattggc actcataatg ctgaatattt ctgatagatg atgaatatat cgatcggcct
    18601 gtatttcacc aaaatgctgc cagccgtaat gccagatatt ttccagatct tcactggcct
    18661 ttggcgttaa ttttaccgtt ctcatcgggt ttgatcatcc ctgttttgac cttccgtaaa
    18721 aaggcatcct tttcccaggc ctgcggctct ccgctgttca gaccttcagc cagaagttca
    18781 cgtaacgcct gaagtcgtga ctcggcctgt ttttccctca gcagacgaag agactctctg
    18841 atcacttcac tttgcgttct gtaatcacct gattctatga gcgattcaat aaactcgcgc
    18901 aattcatcgc caagatcaac ggtcattgtt ctggccataa cagcctccac tgtaagtata
    18961 aatcttacat aagagtacac ctgaaatgaa atgtacgtca aaaacatacc tcatatatca
    19021 tgcttatggg gttggctaat gcggctttgc tgaacgagta gcaaagccgc tacattatta
    19081 ctgtctgggg tttacccccc gtgcagtcgc cgtgcatcaa tcacatccgg cacctggttc
    19141 agcttaccga gcacgcggcc cagcacctgc aggttgtaga tctcgatggt catatcaatg
    19201 gtggcgatct gctgtttaat gtcgctgcgg ctggcgacgc ccagcacgtt gactttttcg
    19261 ttagccagaa tggtggtgat atcacgcaat aaaccgctgc gatcgttggc ctggacgcgc
    19321 accaccagcg aatatcccgc cgagtagctt tcgccccata ccgcctctac gatccgctcc
    19381 ggcgcatggg agcgcagttc cgccagctgt tcgcagtcgg cccggtgcac ggaaatcccc
    19441 cgcccctgag taatgaagcc gacaatttca tcccccggaa tcggctggca gcagcgggca
    19501 atgtggtgca tcaggttacc aaccccttcc accaccacgc gcccgtcgtc tttacgacga
    19561 ttttgcggcg cgtatgtttt ttgctgaagc tgtttcagcg ccgctgcatc ctgctcctct
    19621 gcactcggct tattgaactg cgattgcagg aaattcacca tctgattaag acggatatcg
    19681 ccgccgccta tcgccgccag caactcttcc agctcattaa agttgtagcg cggcagcaga
    19741 tgtttttcgg cctctttcag gctaatcccc aaatgcgcca gctcatcgtc gaggatctgc
    19801 cgtccagcca ggatattttt gtcacggtcc tgtttacgga accaggcgtg aattttcgag
    19861 cgtccgcggc tggtcgtcac atagcccagg tttggattca gccagtcgcg gctgggattc
    19921 ggctgcttct gagtgataat ttcaacctga tcgcccatct gtaactggta ggtaaacggt
    19981 acgatgcgcc caccaatttt cgcgccgatg cagcggtgcc cgacatcgct gtggatgtgg
    20041 taagcaaaat cgagcggcgt agatccggca ggcaagtcaa ccacgtcgcc ttttggcgta
    20101 aaaacgtaga cccgatcgtc aaacacctgg ctgcgcactt catccagcat ttcgccggaa
    20161 tcggccatct cttcctgcca ggcgatcagc ttacgcagcc acgcaattct gtcttcatgg
    20221 ccggaacgca cgccgccgga cgcggcgcct tctttatact tccagtgcgc cgccacaccc
    20281 agttcggcgt cttcatgcat ctgtttggta cggatctgga tctcaacggt tttaccgccc
    20341 ggccccaaga ccacggtgtg gatagactgg taaccgttcg gtttcgggtt agcgacataa
    20401 tcatcgaatt catccggcag gtggcgatag tgcgtatgca ctatccccaa cgcggcgtag
    20461 cagtcttgca gacgttcagc gacgatacgc acggcgcgca cgtcaaagag ttcatcaaac
    20521 gccagatgct ttttctgcat tttgcgccag atgctataaa tatgttttgg tcgtccgtag
    20581 acttccgcct gcacgccttc gtttttcatt tcggcgcgca gatgtccaac aaactcttcg
    20641 atgtaatgtt cgcgatcgag gcggcgttca tgcagcagtt tggcgatgcg tttgtattcc
    20701 gccggatgca ggtagcggaa acagtagtct tccagttccc acttcagttg cccgatgccc
    20761 agacgattag cgagcggcgc atagatgttg gtacattctt tcgccgccag cacgcgctca
    20821 tcttccggcg cctctttcac ttcgcgcaaa tgagcgattc gctcggccag tttgatgacc
    20881 acgcagcgga aatcatccac catcgccaat aacattcgac ggacgttatc aacctgctcc
    20941 gaagaaacag agtcgttatg agtggcgttt aactggcgga tcgccgccat atcgcgcacg
    21001 ccatgaatca gggtaacgat agatttgcca acgctttcgc gcagtacatc ttcgctgact
    21061 acgttggcgt cggccagagg gaacagtagc gccgcccgca gcgtgtcgat atccatactc
    21121 agcgtggaaa gaatttctac catctccacg ccacgccaca gcaacagatc cgcatccgga
    21181 tgtccttgtg tctgttgcag gcaatacgcc caggtttcgg ctaagcgctc acacgactgc
    21241 tggctggaaa ttcccaggct tgcgatccac ttcttcggat caaattcacc agctttatta
    21301 atatgtgcac ttcttaccgc gaccatcgtc ctctccttaa gggaccaggc ctaccgaagt
    21361 cggtaagccg gtaatcatta catgcgctcg aacagaacca ttgattccag atgtcctgtg
    21421 tgcgggaaca tgtcgagcat cgctaaacgc gtaacctcat atcccgcatt gaccagcgct
    21481 tcactatcgc gcgccagcgt cgccgggtta caggatacat aaacaatgcg aataggtttt
    21541 aattttataa tatgtcgcat cactcctgta gcccccgcac gcgcaggatc gagtaagact
    21601 ttgtcaaagc cgtttttcgc ccacggctgc ttcgtgacat cttcctccag gttctcgtgg
    21661 aagaatgtca cattatgtaa accattgcgg atggcgtttt cacggccttt ttctaccagc
    21721 gcctgaacgc cctcaacccc taccacgctt gccgcgcgcg ttgccagcgg tagcgtaaaa
    21781 ttccccattc cgcagaacag atccaggaca cgatcctcgg cgcgcacatc aagccactcc
    21841 agcgcgcggg cgaccatttg ctggtttacc gcctcattaa cctgaataaa gtctcgcgga
    21901 ctgaaggtta aacgtaagcc gtgcgaatca taccagggcg cttcgccaga taccgtttcc
    21961 agtatctcgc taaacggcgc caggaacaga gacaatccct cagaatgcga aaagcgttcc
    22021 agtttttctt tatccgccgc acttaatggc gcggtatggc gcagaatcat cagcgtaccg
    22081 cttcccgcct gtaccagctc aacatgccca agatgtcggg tgccgtgtaa actcgccaga
    22141 cacgccctga tgcggggcag caatgcttca agctggggcg ccaaaacggg gcactgttcg
    22201 acattgacga tatcgctgga acccgctttg cgaaatccca tttgcagcgg tttatccggc
    22261 gggcaattca gacttaaccg cgcacgacgc cgataacccc aggacgcgcc ggcgatgatg
    22321 tcattcacct catgtttcat taaacgcgcc agcgccgcgc ttttgctgcg ttgttgcagg
    22381 tcgatgccga catgctgttg ctgacaaccg ccgcagacgc caaaatgcgg gcagcgcggc
    22441 gtttctcgtt ccgggctatc attcaaacgg cgcgaaacgc gtgcgcgggc aaattgcttt
    22501 ttatcttctg taataatgac ttctgcgctt tcctcaggca ataaaccggg gataaacagc
    22561 gcctttccgt tatgacgggc tacgccctga ccaaatgaat cgaggtcatt gactttaacg
    22621 gttatgatct gacgcgtcgt cacgcgccgt tttgcagagt agaattgcgc catcgaccag
    22681 ctttttctca atttaacagt gtgaccctaa ttgtcccata acggaactcc atgaccaact
    22741 acagcctgcg cgcacgcatg atgattctga tcctggcccc gaccgtcctg ataggtttgc
    22801 tgctcagtat cttttttgta gtgcaccgct ataacgacct gcagcgtcaa ctggaagatg
    22861 ccggcgccag tattattgaa ccgctcgccg tctccagcga atatggtatg aacttacaaa
    22921 accgggagtc tatcggccaa cttatcagcg tcctgcaccg cagacactct gatattgtgc
    22981 gggcgatttc cgtttatgac gatcataacc gcctgtttgt aacgtctaat ttccatctgg
    23041 acccctcaca gatgcagctt cctgccggag cgccgtttcc acgtcgtctg agcgttgatc
    23101 gccacggcga tattatgatt ctgcgcaccc cgattatctc ggagagctat tcgccggacg
    23161 agtcagcgat tgccgacgcg aaaaatacca aaaatatgct ggggtatgtg gcacttgaac
    23221 tggatctcaa gtcggtcagg ctacagcaat acaaagagat ttttatctcc agcgtgatga
    23281 tgcttttttg tattggcatt gcgctgatct ttggctggcg gcttatgcgc gatgtcaccg
    23341 ggcctatccg taatatggtg aataccgttg accgcattcg ccgcggacaa ctggatagcc
    23401 gtgtggaagg atttatgctg ggcgagctgg acatgctgaa aaacggcatt aattccatgg
    23461 cgatgtcgct tgccgcctat cacgaagaga tgcagcataa tatcgatcag gccacctcgg
    23521 acctgcgtga aacccttgag cagatggaaa tccaaaacgt tgagctggat ctggcgaaaa
    23581 agcgcgccca ggaagcggcg cgtattaagt cggagttcct ggcgaacatg tcgcacgaac
    23641 tgcgaacacc gctgaacggc gtcattggtt ttacccgcct gacattaaaa acggagctga
    23701 accccaccca gcgcgaccat ctgaacacca ttgagcgttc cgcgaataat ctgctggcaa
    23761 tcattaatga cgtgctcgac ttctccaagc tggaagccgg taagctcatt ctggaaagta
    23821 tcccttttcc actgcgcaac acgctggatg aagtggttac gctgctggcc cactcgtcgc
    23881 atgataaagg gctggagttg acgttaaata ttaaaaacga cgtcccggaa aatgtgattg
    23941 gcgacccgct gcgcctgcaa caggtcatta ctaatctggt gggcaatgcc attaagttca
    24001 ccgagagtgg caatatcgac attctggtag aaaagcgggc gctcagtaac accaaagtac
    24061 agattgaagt gcagatccgc gatacgggga tcggcattcc ggagcgcgac cagtcgcgac
    24121 tgtttcaggc gtttcgccag gccgatgcca gtatttctcg ccgtcacggc ggcaccgggc
    24181 ttgggctggt gattacgcaa aagctggtca acgaaatggg cggggatatc tctttccaca
    24241 gccagcctaa tcgcggctcg accttctggt ttcatattaa tcttgatctt aacccaaatg
    24301 tcattattga cgggccgtcg accgcgtgtc tggccgggaa acggctggct tatatcgaac
    24361 cgaatgctac cgccgcgcaa tgtaccctgg atctactgag cgacacgccg gtggaagtga
    24421 tttacagccc gaccttctcc gcgctgccgt tagcgcacta cgatattatg attttgagcg
    24481 ttccggtgac cttccgcgag ccgctcacca tgcagcatga acgtctggcg aaagcagcgt
    24541 caatgacgga ctttctactg ctggcgctac cttgccatgc gcaaattaat gccgaaaagc
    24601 tgaaacaagg aggcgcggca gcctgtctgt taaaaccatt gacgtcaacg cgcctgttgc
    24661 cagcgctgac agaatattgc cagttgaatc accatcctga accgctgcta atggatacca
    24721 gtaaaatcac catgacggtt atggcggttg atgataatcc cgctaatctg aagcttatcg
    24781 gcgcgttact ggaagataaa gtccagcacg tagagctttg tgatagcgga catcaggcgg
    24841 tggatcgggc gaaacaaatg cagtttgatc tgattttgat ggatattcag atgccggata
    24901 tggacggcat acgcgcctgc gagttaattc accagcttcc tcatcagcag caaacaccgg
    24961 ttattgccgt tacggcacat gcgatggccg ggcaaaaaga gaagttgctc agcgcgggca
    25021 tgaacgacta tctggctaaa ccgatagaag aagagaagtt gcataatctg ttgctgcgct
    25081 ataaacccgg cgccaacgta gcagcgcgcc tgatggcgcc ggaaccggct gagtttatct
    25141 tcaatccgaa tgcgacgctc gactggcagc ttgcgctccg ccaggctgcc ggtaagcccg
    25201 atctggcacg ggatatgctg caaatgctga ttgattttct gccggaagtg cgcaacaaaa
    25261 ttgaagaaca actggtggga gagaatccca acggcctggt cgatctggtc cataagctac
    25321 acgggagctg cggctatagc ggcgtaccgc ggatgaagaa cctttgccag cttattgagc
    25381 aacagcttcg cagcggcgtc cacgaagagg agctggagcc tgagtttctg gagctgctgg
    25441 atgagatgga taatgtcgcg cgtgaagcga agaagatatt aggctgatat tcgccggatg
    25501 gcggcgtgac cgccttatcc ggcctacaac tcagcgtaat tgttgccccg ctttcagcgt
    25561 tgcagccacg ttgcgcgcgg tcattcgtac gttttcactc gcattcttca gcgcgtcctc
    25621 caacgtgcag atggtataaa tcacgctgaa aacggcatca agcccatgtt catgaaccac
    25681 gccaacgtcc gccgtcaggc tacccgcaat accaattacc ggcttgttat accgtttggc
    25741 gatgtttgcc acgccaatag ggactttacc gtgaatggtc tgactgtcga tgcgtccctc
    25801 gccggtgatg actaaatcag catccgcaag acacgcttcc agatgaagcg catcggtgac
    25861 aatctcaata ccacgccgta gctgcgcgcc gcaaaacgcg tataacgccg cccccatgcc
    25921 gcctgccgcg ccgccgcctg ccagatccaa cacatcgaca tgcagatcgc gggcaatcaa
    25981 atgcgcatag cgagtcaatg ccgtatctag gcgttcaatc atttccggcg tcgccccttt
    26041 ttgcggacca aaaactgcag acgcgccctc tttgccggta aggggattcg tgacatcgca
    26101 ggcgacctct atatggcacg ccgacaaacg cttatccagg ccgctgatat caatgctggc
    26161 gagtgtttcc agcccaatgc cgccttgcgc aatatcattg ccctgcgcat cccgtagcct
    26221 ggcacccagc gcctgtacca tccccgcgcc gccatcgttg gtggcgctac cgccgatacc
    26281 aataatgata tgctcaacgc ccgcatccag cgcatgacgg atcagctcgc cggttcccca
    26341 tgacgtggtc t
//
LOCUS       DAGWFR010000045        26071 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.046, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000045 DAGWFR010000000
VERSION     DAGWFR010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 26071)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26071)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26071
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.046"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..2731)
                     /gene="mfd"
                     /locus_tag="MOX77_001919"
     CDS             complement(<1..2731)
                     /gene="mfd"
                     /locus_tag="MOX77_001919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HCA3357461.1"
                     /translation="MPEKQRYTLPTKAGDQRQLGELTGAACATLVAEIAERHAGPVVL
                     IAPDMQNALRLHDEIRQFTDQMVMNLADWETLPYDSFSPHQEIISSRLSTLYQLPSMQ
                     RGVLIVPVNTLMQRVCQHSYLHGHALVMKKGQRLSRDALRAQLDSAGYRHVDQVMEHG
                     EYATRGALLDLFPMGSEQPYRLDFFDDEIDSLRLFDADTQRTLEEVEAINLLPAHEFP
                     TDKAAIELFRSQWRDTFEVKRDAEHIYQQVSKGTLPAGIEYWQPLFFSEPLPPLFSYF
                     PANTLVVNTGSLETSAERFQADTLARFENRGVDPMRPLLPPEALWLRVDGLFSELKRW
                     PRLQLKTDHLPEKAANTNLGFQKLPDLAIQAQQKAPLDALRKFLESFSGPVIFSVESE
                     GRREALGELLARIKIAPKRILRLDEAQDAGRYLMIGAAEHGFIDTQRNLALICESDLL
                     GERVARRRLDSRRTINPDTLIRNLAELHVGQPVVHLEHGVGRYAGMTTLEAGGIKGEY
                     LMLTYANDAKLYVPVSSLHLISRYAGGAEESAPLHKLGGDAWSRARQKAAEKVRDVAA
                     ELLDIYAQRAAKEGFAFKHDREQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDR
                     LVCGDVGFGKTEVAMRAAFLAVENHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEM
                     LSRFRSAKEQTQILAEAAEGKIDILIGTHKLLQSDVKLRDLGLLIVDEEHRFGVRHKE
                     RIKAMRADVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSLVV
                     REAILREILRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRERELERVMND
                     FHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQA"
     gene            3069..4268
                     /gene="lolC"
                     /locus_tag="MOX77_001920"
     CDS             3069..4268
                     /gene="lolC"
                     /locus_tag="MOX77_001920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004976588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit LolC"
                     /protein_id="HCA3357462.1"
                     /translation="MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTV
                     LSVMNGFERELQNNILGLMPQAILSAEHGSLNPNQMPEKAVNLQGVNRIAPLTTGDVV
                     LQSARSVAVGVMLGIDPAQKDPLTPYLVNVKQSELQPGKYNVILGEQLAGQLGVNRGD
                     QIRLMVPSASQFTPMGRLPSQRLFTVIGTFAANSEVDGYEMLVNIQDASRLMRYPAGN
                     ITGWRLWLDEPLQVDTLSQQTLPQGTKWQDWRERKGELFQAVRMEKNMMGLLLSLIVA
                     VAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGALLGAALGA
                     LLASQLNNLMPIIGAFLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQP
                     AEALRYE"
     gene            4261..4962
                     /gene="lolD"
                     /locus_tag="MOX77_001921"
     CDS             4261..4962
                     /gene="lolD"
                     /locus_tag="MOX77_001921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter
                     ATP-binding protein LolD"
                     /protein_id="HCA3357463.1"
                     /translation="MNKILLQCDNLCKRYQEGTVQTDVLHDVSFSIGEGEMMAIVGSS
                     GSGKSTLLHLLGGLDTPTSGDVIFSGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDF
                     TALENVAMPLLIGKKKPAEIDARAREMLHAVGLEHRATHRPSELSGGERQRVAIARAL
                     VNNPRLVLADEPTGNLDARNADSIFELLGELNRLQGTAFLVVTHDLQLAKRMSRQLEM
                     RDGRLTAELSLMGAE"
     gene            4962..6206
                     /gene="lolE"
                     /locus_tag="MOX77_001922"
     CDS             4962..6206
                     /gene="lolE"
                     /locus_tag="MOX77_001922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit LolE"
                     /protein_id="HCA3357464.1"
                     /translation="MASPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVG
                     LSAMNGFERELNNRILAVVPHGEIEAVNQPWTNWREALAKVQKVPGIAAAAPYINFTG
                     LVESGANLRAIQVKGVDPKQEQQLSALPSFVQNHAWDHFKAGEQQIIIGKGVADALNV
                     KQGDWVSIMIPNANADHKLLQPKRVRLHVIGILQLSGQLDHSFAMIPLEDAQQYLDMG
                     SSVSGIALKVHDVFNANKLVRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAM
                     ILVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLLGSLIG
                     VAIGVVVSLQLTAIINGIEKEIGHQFLSGDIYFIDFLPSELHWLDVVYVLVTALLLSL
                     LASWYPARRASNIDPARVLSGQ"
     gene            6235..7143
                     /gene="nagK"
                     /locus_tag="MOX77_001923"
     CDS             6235..7143
                     /gene="nagK"
                     /locus_tag="MOX77_001923"
                     /EC_number="2.7.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine kinase"
                     /protein_id="HCA3357465.1"
                     /translation="MYYGFDIGGTKIALGVFDSTRRLQWEKRVPTPHTSYSAFLDAVC
                     ELVAEADQRFGVKGSVGIGIPGMPETEDGTLYAANVPAASGKPLRADLSARLDRDVRL
                     DNDANCFALSEAWDDEFTQYPLVMGLILGTGGGGLVLNGKPITGQSYITGEFGHMRLP
                     VDALTLMGFDFPLRRCGCGQMGCIENYLSGRGFAWLYQHYYDQSLQAPEIIALWEQGD
                     EQAHAHVERYLDLLAVCLGNILTIVDPDLLVIGGGLSNFTAITTQLAERLPRHLLPVA
                     RAPRIERARHGDAGGMRGAAFLHLTD"
     gene            7162..7983
                     /gene="cobB"
                     /locus_tag="MOX77_001924"
     CDS             7162..7983
                     /gene="cobB"
                     /locus_tag="MOX77_001924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent protein deacylase"
                     /protein_id="HCA3357466.1"
                     /translation="MQSRRFHRLSRFRKNKRLLRERLRQRIFFRDRVVPEMMENPRVL
                     VLTGAGISAESGIRTFRAADGLWEEHRVEDVATPEGFARNPGLVQTFYNARRQQLQQP
                     EIQPNAAHLALAKLEEALGDRFLLVTQNIDNLHERAGNRNIIHMHGELLKVRCSQSGQ
                     ILEWNGDVMPEDKCHCCQFPAPLRPHVVWFGEMPLGMDEIYMALSMADIFIAIGTSGH
                     VYPAAGFVHEAKLHGAHTVELNLEPSQVGSEFEEKHYGPASQVVPEFVDKFLKGL"
     gene            complement(8065..9111)
                     /gene="potD"
                     /locus_tag="MOX77_001925"
     CDS             complement(8065..9111)
                     /gene="potD"
                     /locus_tag="MOX77_001925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter
                     substrate-binding protein PotD"
                     /protein_id="HCA3357467.1"
                     /translation="MKKWSRHLLAAGALALGMSAAHASDNDTLYFYNWTEYVPPGLLE
                     QFTKETGIKVIYSTYESNETMYAKLKTYKDGAYDLVVPSTYYVDKMRKEGMIQKIDKS
                     KLTNFHNLDPEMLNKPFDPNNDYSVPYIWGATAIGVNSDAIDPKTITSWADLWKPEYK
                     NSLLLTDDAREVFQMALRKLGYSGNTTDPKEIEAAYEELKKLMPNVAAFNSDNPANPY
                     MEGEVNLGMVWNGSAFVARQAGTPLEVVWPKEGGIFWMDSLAIPANAKNKEGALKLIN
                     FLLRPDVAKEVAETIGYPTPNLAARKLLSPEVANDKSLYPDAQTISKGEWQNDVGDAS
                     AIYEEYYQKLKAGR"
     gene            complement(9136..9915)
                     /gene="potC"
                     /locus_tag="MOX77_001926"
     CDS             complement(9136..9915)
                     /gene="potC"
                     /locus_tag="MOX77_001926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter permease
                     PotC"
                     /protein_id="HCA3357468.1"
                     /translation="MIGRLLRGGFMTAIYAYLYIPIIILIVNSFNSSRFGINWQGFTT
                     KWYELLVNNDSLLQAAQHSLTMAIFSATFATLIGSLTAVALYRYRFRGKPFVSGMLFV
                     VMMSPDIVMAISLLVLFMLLGIQLGFWSLLFSHITFSLPFVVVTVYSRLKGFDVRMLE
                     AAKDLGASEVTILRKIILPLAMPAVAAGWLLSFTLSMDDVVVSSFVTGPGYEILPLKI
                     YSMVKVGVSPEVNALATVLLVLSLVMVIASQLIARDKTKGR"
     gene            complement(10231..11241)
                     /gene="sifA"
                     /locus_tag="MOX77_001927"
     CDS             complement(10231..11241)
                     /gene="sifA"
                     /locus_tag="MOX77_001927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-2 type III secretion system effector SifA"
                     /protein_id="HCA3357469.1"
                     /translation="MPITIGNGFLKSEILTNSPRNTKEAWWKVLWEKIKDFFFSTGKA
                     KADRCLHEMLFADRTPTRERFTEIFFELKELACASQRDRFQVHNPHENDDTIILRIMD
                     QNEENELLRITQNTDTFSCEVMGNAYFLIKDRPDILKPHPQMTAMINRRYSEIVDYPL
                     PSTLCLNPAGAPTLSVPLDNIEGYLYSEWRKGNLDEWKTQEKATYLAAKIQSGIEKTT
                     RILQHANISESTQQNAFLETMTMCGLKQLEIPPPHTHIPIEKMVEEVLLADKTFQAFL
                     VTDPSASLSMLAEIVEAISDQVFHAIFRIAPQSIQKMAEEQLTTLHVRSEQQSGYLCC
                     FL"
     gene            complement(11570..12433)
                     /gene="potB"
                     /locus_tag="MOX77_001928"
     CDS             complement(11570..12433)
                     /gene="potB"
                     /locus_tag="MOX77_001928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter permease
                     PotB"
                     /protein_id="HCA3357470.1"
                     /translation="MKNTSKFQNVVIVTIVGWLVLFVFLPNLMIIGTSFLTRDDASFV
                     KMVFTLDNYARLLDPLYFEVLLHSLNMALIATLSCLVLGYPFAWFLAKLPEKIRPLLL
                     FLLIVPFWTNSLIRIYGLKIFLSTKGYLNEFLLWLGVIDTPIRIMFTPSAVIIGLVYI
                     LLPFMVMPLYSSIEKLDKPLLEAARDLGASKMQTFIRIIIPLTMPGIVAGCLLVMLPA
                     MGLFYVSDLMGGAKNLLIGNVIKVQFLNIRDWPFGAATSITLTIVMGLMLLIYWRASR
                     LLNKKVSDISD"
     gene            complement(12417..13553)
                     /gene="potA"
                     /locus_tag="MOX77_001929"
     CDS             complement(12417..13553)
                     /gene="potA"
                     /locus_tag="MOX77_001929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter
                     ATP-binding protein PotA"
                     /protein_id="HCA3357471.1"
                     /translation="MGQSKKLNKQPRSLSPLVLLSGISKSFDGKEVISQLDLTINNGE
                     FLTLLGPSGCGKTTVLRLIAGLETVDAGHIMLDNQDITHVPAENRYVNTVFQSYALFP
                     HMTVFENVAFGLRMQKTPAAEIAPRVTDALRMVQLEEFAQRKPHQLSGGQQQRVAIAR
                     AVVNKPRLLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRI
                     VVMRNGVIEQDGTPREIYEEPKNLFVAGFIGEINRFDATVIERLDEQRVRASVEGREC
                     NIYVNFAVELGQKLNVLLRPEDLRVEEINDDNHIEGLIGYVRERNYKGMTLESVVELE
                     NGKMVMVSEFFNEDDPDFDHSLDQKMAISWVESWEVVLADEEHK"
     gene            13804..15033
                     /gene="pepT"
                     /locus_tag="MOX77_001930"
     CDS             13804..15033
                     /gene="pepT"
                     /locus_tag="MOX77_001930"
                     /EC_number="3.4.11.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase T"
                     /protein_id="HCA3357472.1"
                     /translation="MDKLLERFLHYVSLDTQSKSGVRQVPSTEGQWKLLRLLKQQLEE
                     MGLVNITLSEKGTLMATLPANVEGDIPAIGFISHVDTSPDFSGKNVNPQIVENYRGGD
                     IALGIGDEVLSPVMFPVLHQLLGQTLITTDGKTLLGADDKAGVAEIMTALAVLKGNPI
                     PHGEIKVAFTPDEEVGKGAKHFDVEEFGAQWAYTVDGGGVGELEFENFNAASVNIKIV
                     GNNVHPGTAKGVMVNALSLAARIHAEVPADEAPETTEGYEGFYHLASMKGTVDRAEMH
                     YIIRDFDRKQFEARKRKMMEIAKKVGKGLHPDCYIELVIEDSYYNMREKVVEHPHILD
                     IAQQAMRDCHITPEMKPIRGGTDGAQLSFMGLPCPNLFTGGYNYHGKHEFVTLEGMEK
                     AVQVIVRIAELTGKRGQ"
     gene            15037..16371
                     /locus_tag="MOX77_001931"
     CDS             15037..16371
                     /locus_tag="MOX77_001931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357473.1"
                     /translation="MLHIVVKRFIIYGGIFSAINFSAWSAEYTPSWSQRQQQSAACFM
                     TGDETCMTFIDDAVRLASRQYGKRSIQLVRSLLLQSDIYQWLGKPELTPQMLLRARAI
                     MKTFPAGTYPGDRADMFEHLAAFYVYGDDRHIEYSPTEQWRYEIKVDYRQRIAWQEQA
                     LTWRLKDKKTSTEALVYTLNRMRDAYSDALEERDVECDSARKAYYLAKIDAAERQWLS
                     VILRDKTWDNRERVASFLQQKADIAYNAGHISEAINALSQALKIEQTLYGTEFGEMTV
                     DSNNLAGFYAQGHHYKEAKDLYLKLIAYYQSRLTPMATVISRLRFYLPENIDLDSTSP
                     YLPLLEEYKRRQSDVSMVLYGISLLYKNNQQLEQAKDFAERAFTLDAVAYPAKMQYER
                     LQQLANIAEGLGDNAQARRYRQMSFRHRMAHSIYPGDPQYNDFAKPGGDRCG"
     gene            complement(16411..17532)
                     /locus_tag="MOX77_001932"
     CDS             complement(16411..17532)
                     /locus_tag="MOX77_001932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HCA3357474.1"
                     /translation="MEYQLTLNWPDFLERHWQKRPVVLKRGFTNFIDPLSPDELAGLA
                     MESEIDSRLVSHQDGKWQVSHGPFESYDHLGESNWSLLVQAVNHWHEPTAALMRPFRA
                     LPDWRIDDLMISFSVPGGGVGPHLDQYDVFIIQGTGRRRWRVGEKLQMRQHCPHPDLL
                     QVDPFEAIIDEELEPGDILYIPPGFPHEGYALENAMNYSVGFRAPNSRELISGFADYV
                     LQRDLGNTYYSDPDMPSRKHPADILPQEMDKLRNMMLDLINQPAHFQQWLGEFISQSR
                     HELDIAPPEPPYQPDEIYDALKQGEALVRLGGLRVLRIGDEVYANGEKIDSPHRPALE
                     ALTSHIVLTAENFGDALEDPSFLAMLAALVNSGYWFFEG"
     gene            complement(17613..19076)
                     /gene="phoQ"
                     /locus_tag="MOX77_001933"
     CDS             complement(17613..19076)
                     /gene="phoQ"
                     /locus_tag="MOX77_001933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     PhoQ"
                     /protein_id="HCA3357475.1"
                     /translation="MNKFARHFLPLSLRVRFLLATAGVVLVLSLAYGIVALVGYSVSF
                     DKTTFRLLRGESNLFYTLAKWENNKISVELPENLDMQSPTMTLIYDETGKLLWTQRNI
                     PWLIKSIQPEWLKTNGFHEIETNVDATSTLLSEDHSAQEKLKEVREDDDDAEMTHSVA
                     VNIYPATTRMPQLTIVVVDTIPIELKRSYMVWSWFVYVLAANLLLVIPLLWIAAWWSL
                     RPIEALAREVRELEDHHREMLNPETTRELTSLVRNLNQLLKSERERYNKYRTTLTDLT
                     HSLKTPLAVLQSTLRSLRNEKMSVSKAEPVMLEQISRISQQIGYYLHRASMRGSGVLL
                     SRELHPVAPLLDNLISALNKVYQRKGVNISMDISPEISFVGEQNDFVEVMGNVLDNAC
                     KYCLEFVEISARQTDDHLHIFVEDDGPGIPHSKRSLVFDRGQRADTLRPGQGVGLAVA
                     REITEQYAGQIIASDSLLGGARMEVVFGRQHPTQKEE"
     gene            complement(19076..19747)
                     /gene="phoP"
                     /locus_tag="MOX77_001934"
     CDS             complement(19076..19747)
                     /gene="phoP"
                     /locus_tag="MOX77_001934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator PhoP"
                     /protein_id="HCA3357476.1"
                     /translation="MRVLVVEDNALLRHHLKVQLQDSGHQVDAAEDAREADYYLNEHL
                     PDIAIVDLGLPDEDGLSLIRRWRSSDVSLPVLVLTAREGWQDKVEVLSSGADDYVTKP
                     FHIEEVMARMQALMRRNSGLASQVINISPFQVDLSRRELSVNEEVIKLTAFEYTIMET
                     LIRNNGKVVSKDSLMLQLYPDAELRESHTIDVLMGRLRKKIQAQYPHDVITTVRGQGY
                     LFELR"
     gene            complement(19874..21244)
                     /gene="purB"
                     /locus_tag="MOX77_001935"
     CDS             complement(19874..21244)
                     /gene="purB"
                     /locus_tag="MOX77_001935"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002950897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HCA3357477.1"
                     /translation="MELSSLTAVSPVDGRYGDKVSALRGIFSEYGLLKFRVQVEVRWL
                     QKLAAHAAIKEVPAFAADANGYLDTLVANFNEEDAARIKTIERTTNHDVKAVEYFLKE
                     KAAAIPALHDVSEFIHFACTSEDINNLSHALMLKTARDEVILPYWRQVINAVKDLATQ
                     YRDIPLLSRTHGQPATPSTLGKEMANVAYRMERQFRQLNQVEILGKINGAVGNYNAHI
                     AAYPEVDWHQFSEEFVTSLGIQWNPYTTQIEPHDYIAELFDCIARFNTILIDFDRDVW
                     GYIALNHFKQKTIAGEIGSSTMPHKVNPIDFENSEGNLGLSNAVLHHLANKLPVSRWQ
                     RDLTDSTVLRNLGVGIGYALIAYQSTLKGVSKLEVNRDHLLDELDHNWEVLAEPIQTV
                     MRRYGIEKPYEKLKELTRGKRVDAEGMKQLIDSLALPEAEKTRLKAMTPANYIGRAVN
                     LVDELK"
     gene            complement(21248..21889)
                     /gene="hflD"
                     /locus_tag="MOX77_001936"
     CDS             complement(21248..21889)
                     /gene="hflD"
                     /locus_tag="MOX77_001936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="high frequency lysogenization protein HflD"
                     /protein_id="HCA3357478.1"
                     /translation="MAKNYYDITLALSGICQSARLVQQLAHQGHCDADALHVSLNSVI
                     DMNPSSTLGVFGGSEANLRLGLETLLGVLNASSRQGLNAELTRYTLSLMVLERKLSSA
                     KGALNTLGDRINGLQRQLDHFDLQSDTLMSAMAGIYVDVISPLGPRIQVTGSPAVLQS
                     PQVQAKVRASLLAGIRAAVLWHQVGGGRLQLMFSRHRLTTQAKQILAYLTPEL"
     gene            complement(21976..23082)
                     /gene="mnmA"
                     /locus_tag="MOX77_001937"
     CDS             complement(21976..23082)
                     /gene="mnmA"
                     /locus_tag="MOX77_001937"
                     /EC_number="2.1.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309632.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HCA3357479.1"
                     /translation="MSESPKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD
                     GEEYCTAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLEEYKAGRTPNPDILC
                     NKEIKFKAFLEFAAEDLGADYIATGHYVRRADVNGKSRLLRGLDGNKDQSYFLYTLGH
                     EQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFRDFLGRYLPAQP
                     GKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKDGSEDPWYVVDKDVENNVLIVAQG
                     HEHPRLMSVGLIAQQLHWVDREPFTGTLRCTVKTRYRQTDIPCTINALDDDRIEVIFD
                     EPVAAVTPGQSAVFYSGEVCLGGGIIEQRLPLTV"
     gene            complement(23136..23597)
                     /locus_tag="MOX77_001938"
     CDS             complement(23136..23597)
                     /locus_tag="MOX77_001938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HCA3357480.1"
                     /translation="MFKPHVTVACIVHAEDKFLVVEETINGKSLWNQPAGHLEADETL
                     AQAAARELWEETGITAQPQYFIRMHQWIAPDKTPFLRFLFAIKLDHICATAPHDNDID
                     CCRWVSADEILNAPNLRSPLVAESIRSYQTGQRYPLSIVGEFNWPFTEGVK"
     gene            complement(23609..23938)
                     /locus_tag="MOX77_001939"
     CDS             complement(23609..23938)
                     /locus_tag="MOX77_001939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1311 domain-containing protein"
                     /protein_id="HCA3357481.1"
                     /translation="MKRLLIAFALLTPLSVNAASFDCQKAQAADEKAICAHLTLNDKD
                     VEMHTKYQFLKGLFAMGSRGALQDAQQSWLKQRQQCKADVTCLTKAYNERLKQLDAIY
                     DHIDKPL"
     gene            complement(23935..24600)
                     /gene="rluE"
                     /locus_tag="MOX77_001940"
     CDS             complement(23935..24600)
                     /gene="rluE"
                     /locus_tag="MOX77_001940"
                     /EC_number="5.4.99.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(2457) synthase RluE"
                     /protein_id="HCA3357482.1"
                     /translation="MRQLISSENTMQKTSFRNHYVKRFSSRQASKSRKENQPKRVVLF
                     NKPYDVLPQFTDEAGRRTLKDFIPVQGVYAAGRLDRDSEGLLVLTNDGALQARLTQPG
                     KRTGKIYYVQVEGIPDNAALQALRTGVTLNDGPTLPAGIEIVAEPDWLWPRTPPIRER
                     KNIPTSWLKVTLYEGRNHQVRRMTAHVGHPTLRLIRYSMGDYTLNGLDNGQWCEIAQE
                     KDR"
     gene            24772..26022
                     /gene="icd"
                     /locus_tag="MOX77_001941"
     CDS             24772..26022
                     /gene="icd"
                     /locus_tag="MOX77_001941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000444467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HCA3357483.1"
                     /translation="MESKVVVPVEGKKITLQNGKLNVPENPIIPFIEGDGIGVDVTPA
                     MLKVVDAAVEKAYKGERKISWMEIYTGEKSTQVYGQDVWLPAETLDLIRDYRVAIKGP
                     LTTPVGGGIRSLNVALRQELDLYVCLRPVRYYQGTPSPVKHPELTDMVIFRENSEDIY
                     AGIEWKADSADAEKVIKFLREEMGVKKIRFPEHCGIGIKPCSEEGTKRLVRAAIEYAI
                     TNDRDSVTLVHKGNIMKFTEGAFKDWGYQLARDEFGGELIDGGPWLKIKNPNTGKEIV
                     VKDVIADAFLQQILLRPAEYDVIACMNLNGDYISDALAAQVGGIGIAPGANIGDECAL
                     FEATHGTAPKYAGQDKVNPGSIILSAEMMLRHMQWFEAADLIVKGMEGAIAAKTVTYD
                     FERLMDGAKLLKCSEFGDAIIANM"
BASE COUNT         6133 a         6552 c         6985 g         6401 t
ORIGIN      
        1 aggcctggtg gtgcgagcgc cctacgcggc cacgcagctg gtgcaactgc gcgaggccga
       61 aatgatccgc gcgttcaatg atgatcgtgt tagcggtggg aatgtcgatc cccgtttcga
      121 taatggtagt acacaccagc acgttaaaac gttgatggtg gaaatcgttc atgacccgtt
      181 ccagctcacg ttcgcgcatc tgcccgtggc ctatagcgat tcgcgcttcc ggcaccagtt
      241 ccgccagccg ctctgcggct ttctgaatat tttcgacgtc attgtacaaa tagtaaacct
      301 gaccgccgcg caggatttca cgcagaatcg cttcccttac caccaggcta tcatactcgc
      361 ggacaaaggt ttttaccgcc agacgacggg cagggggagt ggcgataatg gagagatcgc
      421 gcataccgct catcgccata ttcagcgtcc gcgggatcgg cgtcgccgtg agcgtcagaa
      481 tatcgacatc ggcgcgcatc gccttaattc gctctttgtg gcgcacgccg aaacggtgct
      541 cttcatcgac aatcagcagg ccgaggtcgc gtagcttcac atcgctttgt agcagtttat
      601 gcgtaccgat cagaatatcg atcttacctt cggcggcttc cgccaggatt tgcgtctgct
      661 ctttggcgct gcgaaagcgg gacagcatct caatgcgtac cggccagttg gcgaaacggt
      721 cgcggaagtt gtcatagtgt tgctgcgcca gcagcgtagt cggcaccagt accgccacct
      781 gtttatggtt ttccaccgcc aggaacgcgg cgcgcatcgc cacttcggtt ttgccgaagc
      841 cgacgtcgcc gcacaccagc ctgtccatcg ccagcggttg gcacatatcg ctcaatacgg
      901 cgttaatcgc ctgtgcctga tcgggcgtcg tttcaaacgg gaagctgtcg cagaataact
      961 gatactgctc acgatcatgc ttaaaggcaa aaccctcttt tgccgctcgt tgcgcataaa
     1021 tatccaacag ttccgctgcg acatcgcgca ctttttccgc cgctttctgc cgggcgcgcg
     1081 accaggcgtc gccgcccagt ttatgcagcg gcgcactttc ttccgcgccg ccggcatagc
     1141 ggctaatcag atgcaatgag gagaccggca catacagttt ggcgtcattg gcgtaagtga
     1201 gcatcagata ttcacccttg atgccgccag cctccagagt ggtcatgccg gcatagcgtc
     1261 cgacgccgtg ctccagatgc actaccggtt gaccgacgtg gagctccgcc aggttacgaa
     1321 tcaacgtatc cgggttgatc gtgcggcggg aatccaggcg gcgacgcgcc acccgctcac
     1381 ccaaaagatc gctttcacaa atcagcgcca gattgcgttg ggtgtcgata aagccatgtt
     1441 ctgcggcgcc aatcatcaga tagcgtcccg catcctgcgc ctcgtccagg cgtaatattc
     1501 gcttcggcgc gatttttatg cgagccagga gctctcccag agcttcgcgg cgtccttcgc
     1561 tttccaccga aaaaatcacc ggaccgctga aagattcgag gaacttacgc agcgcgtcca
     1621 gcggcgcttt ctgctgtgcc tggatagcca aatccggtaa tttctggaaa ccgagattgg
     1681 tattggcggc tttttccggc agatggtcgg ttttaagctg gaggcgaggc cagcgtttaa
     1741 gctcggaaaa gagcccatcc acccgtagcc agagggcttc cggcggcaaa agcgggcgca
     1801 taggatcgac gccacgattt tcaaaacgcg ccagcgtatc ggcctgaaag cgttcggcgc
     1861 tggtttccag cgagccggta ttcaccacca gagtattggc ggggaaatag ctaaataatg
     1921 gcggtaacgg ttcgctgaaa aagagcggct gccagtattc gatcccggcg ggcagagtgc
     1981 ctttgctaac ctgctgatag atgtgctcgg cgtcgcgttt tacctcaaag gtatcgcgcc
     2041 actggctacg gaaaagctca atagcggctt tgtcggtagg aaattcgtgc gcgggcaaca
     2101 aattgatggc ctcaacctcc tccagcgtac gctgggtatc cgcgtcaaac agacgcaggc
     2161 tgtcaatttc atcatcaaaa aagtcgaggc gataaggctg ttcgctgccc atcggaaaga
     2221 gatccaacag cgcgccgcgc gtcgcgtatt cgccatgctc catcacctga tcgacatgcc
     2281 gataaccggc gctgtcaagc tgcgcgcgca gagcgtcgcg ggacagccgc tggccttttt
     2341 tcatcaccag cgcatgacca tgcagatagc tatgctgaca aacgcgctgc atcagggtgt
     2401 ttaccggtac aatcaagacg ccgcgctgca ttgacggcaa ctggtagagc gtggacaggc
     2461 gcgaagagat aatttcctga tgcggggaga agctgtcata cggtagcgtt tcccagtccg
     2521 ccaggttcat gaccatctga tcggtaaact ggcggatttc atcatgcaat cgcagagcat
     2581 tttgcatgtc aggcgctatg agtaccaccg gaccggcatg gcgttcagct atctccgcca
     2641 ccagcgtagc gcaggcggca ccggtaagtt cgcccaactg gcgctgatcg cccgcttttg
     2701 tcggcagcgt gtaacgttgt ttttcaggca taacggttgt cagtatctct ttttgtttta
     2761 cgccgcactc tacgcgtcac ccttcaggct gcttcatggt tggctgcgcg ccaggacagc
     2821 atgaaggact caggtattca ggggcatatg actgataagc aatgttcttt attatccgcg
     2881 atcgttgttt attagcaaat tgaatccgcc ggataacacg ccgaacaggt aaagtatgaa
     2941 catgtaagtg acttgatttg tcggcctttt tcagaataac gctgacgaac tcttacggtt
     3001 cagacattta cgcattccgc tttcgcttat atactcggga ctttgctaac agcaaccaga
     3061 cggattacat gtatcaacct gtcgctttat tcatcggcct gcgttacatg cgcgggcgtg
     3121 cagcagatcg cttcggtcgc ttcgtttcct ggctttccac tatcggcatt accctggggg
     3181 tgatggcgct ggtcacggta ttgtcggtga tgaacggttt tgagcgcgaa ctgcaaaata
     3241 acattcttgg tttgatgcct caggccatcc tctctgctga acatggttct cttaacccga
     3301 atcagatgcc ggaaaaagcg gtgaatctgc aaggcgttaa ccgtattgcg ccgctgacga
     3361 cgggcgatgt cgtactgcaa agcgcgcgta gcgttgcggt tggcgtgatg ttgggtatcg
     3421 atccggcgca aaaagatccg ttaacgccgt atctggtcaa tgtgaagcaa agcgaattac
     3481 agccgggtaa gtataatgtc atcctcggcg agcagctcgc cggacagtta ggggtcaacc
     3541 gcggcgatca gattcggcta atggtgccat ctgccagcca gtttacgcca atgggacgcc
     3601 tgcccagcca gcgtctgttt acggtgattg gcacatttgc cgccaatagc gaggtcgatg
     3661 gctatgaaat gctggtcaat attcaggacg cgtcgcgttt aatgcgctat ccggcaggca
     3721 atattaccgg ctggcgtctg tggctggatg aaccgctgca agtcgatact ctcagccaac
     3781 agacgctgcc gcaaggcacg aagtggcagg actggcgcga acgtaaaggc gagttgttcc
     3841 aggctgtgcg catggaaaag aacatgatgg gattgttgct gagcctcatc gtggcggtcg
     3901 cggcttttaa cattattact tcgttgggtc tgatggtcat ggagaagcag ggcgaagtgg
     3961 cgattttaca aactcaaggg ctgacgccgc gacaaattat gatggtcttt atggtgcagg
     4021 gcgccagcgc cgggattatc ggcgcgctgt tgggcgccgc gctgggcgca ttgcttgcca
     4081 gccaactgaa taacctgatg ccgatcatcg gcgcgtttct ggatggcgct gcgttgcccg
     4141 tggcgataga gccgttacag gtgatcgtta tcgcgctggt ggcaatggcc atcgcgctgc
     4201 tttctacgct ttatccttcc tggcgcgctg ccgccactca acccgctgag gctttacgtt
     4261 atgaataaga tcctgttgca atgcgacaac ctgtgcaaac gctatcagga aggcaccgta
     4321 caaaccgacg tgttgcacga tgtcagcttc agtatcggcg aaggcgaaat gatggcgatc
     4381 gtcggcagtt ccggttcggg taaaagtacg ttgctgcatc tgttaggcgg gctggatacg
     4441 cctacctctg gcgatgtgat ttttagcggc cagccgatga gcaaactctc ttctgcggca
     4501 aaagcggaat tacgtaacca gaaactgggg tttatctatc agtttcatca tctcctgccg
     4561 gattttacgg cgctggaaaa cgtggcgatg ccattattga ttggcaaaaa gaaaccggcg
     4621 gagattgacg ctcgggcgcg agaaatgttg catgctgtag ggctggagca tcgcgcaacc
     4681 catcgacctt cggaactttc cggcggtgag cgccagcgtg tcgcgatagc gcgcgcgttg
     4741 gtgaataacc cgcgtctggt actggcggat gagccgaccg gtaatctgga tgcgcgtaat
     4801 gccgacagta tttttgagct tctgggcgag ttaaatcgtc tgcagggaac cgcgtttctg
     4861 gtggtgactc acgatttgca actggcgaaa cgtatgagcc gccagcttga gatgcgcgat
     4921 ggccgcctga cagcggaact gagcctgatg ggggctgagt aatggcgtcg cctttatcat
     4981 tgttaattgg cttgcgtttc agccgtggac ggcggcgcgg cggtatggtt tcgctcattt
     5041 ccgtcatttc taccatcggt atcgcgctgg gcgtggcggt gttgattgtc ggtttaagcg
     5101 cgatgaacgg tttcgaacgc gagttgaata accgtattct ggcggtggtt ccacacgggg
     5161 agattgaagc ggtcaatcag ccgtggacca actggcgtga agcgctggca aaagtgcaga
     5221 aggtgccggg cattgccgcc gccgcgccgt atatcaattt taccggcctg gtagagagcg
     5281 gggcgaattt gcgcgccatt caggttaaag gcgtcgatcc taagcaagag cagcagctta
     5341 gcgcgttacc gtcatttgtg caaaatcacg cctgggatca tttcaaagcg ggcgagcagc
     5401 agatcattat cggtaaaggc gtcgccgatg cgctgaacgt gaaacagggc gactgggtgt
     5461 ccatcatgat ccccaatgcg aatgccgacc ataagctgct ccagcccaaa cgcgtgcgtt
     5521 tgcatgtcat cgggattctg caactgagcg gccagctcga tcacagcttc gccatgatcc
     5581 cgcttgagga tgcgcagcag tatctggata tggggtccag cgtttccggt atcgcgctta
     5641 aagtccacga cgtgtttaat gcgaacaaac tggtgcgtga tgcgggtgaa gtgactaaca
     5701 gctatgtcta cattaagagc tggatcggca cctacggcta tatgtatcgc gatatccaga
     5761 tgattcgcgc cattatgtat ctggcgatga ttctggtgat cggcgtggcc tgttttaata
     5821 tcgtttccac cttagtgatg gcggtaaaag acaaaagcgg cgacattgcg gtattaagaa
     5881 cgctgggggc gaaagatggt ttgattcgtg ccattttcgt ctggtacgga ctactggcgg
     5941 gcttgctggg cagcttgatt ggcgtggcga tcggcgttgt cgtttcgctt cagcttaccg
     6001 ccattattaa tgggattgaa aaggagatcg ggcatcagtt tttgtccggc gatatctatt
     6061 ttatcgactt cctgccatcc gaattacatt ggctggacgt tgtttacgta ctggtcacgg
     6121 cgttgttgtt aagcttactg gcgagctggt atccggcgcg gcgggcgagc aacattgacc
     6181 ctgcgcgagt attgagcggc cagtaatcgc ggaatataaa aacaaggagc ggcgatgtat
     6241 tacgggtttg acattggcgg aacaaagatt gcgttaggcg tatttgactc aacgcggcgg
     6301 ctgcagtggg aaaaacgggt tcccacgccc cataccagct atagcgcctt tttagacgcc
     6361 gtgtgcgaac tggtcgcgga agccgaccag cgatttggcg taaaagggtc ggtagggatt
     6421 ggcatacccg gtatgccgga aactgaagac ggcacgctgt acgccgcgaa tgtcccggca
     6481 gccagcggta agccgttgcg cgccgatctc agcgcccgac tggatcgcga tgtgcgtctg
     6541 gacaatgacg ctaactgttt tgccttgtcc gaagcctggg atgatgaatt cacgcaatat
     6601 cctttggtta tggggcttat cctcggcacc ggcggcggcg gcctggtgct aaacgggaag
     6661 ccgattaccg gtcagagcta tatcaccggc gagtttggcc atatgcgttt gccggttgac
     6721 gcgctaacgt tgatggggtt tgattttcct ctccgccgtt gtggatgcgg ccagatgggc
     6781 tgcattgaga attatctgtc cgggcgcggg tttgcgtggc tatatcaaca ttattatgat
     6841 caatcgctgc aggcgccgga gattatcgcg ttgtgggagc agggtgatga gcaggcgcac
     6901 gcgcatgttg agcgctatct ggatttactg gcggtttgtc tggggaatat actgacgatt
     6961 gtcgatcccg atttattggt gatcggcggc ggactatcga actttacggc aataacaacg
     7021 caactggcgg aaagactgcc gcgccatctc ctccctgttg cccgcgcgcc gcgcattgag
     7081 cgtgcgcggc atggggatgc aggtgggatg cgcggtgctg cttttttaca tcttaccgac
     7141 taatcaaaaa aagaggttgt tatgcagtcg cgtcggtttc atcgattaag ccgctttcgt
     7201 aaaaataaac gtctgttgcg tgaacgtctg cgccagcgga tctttttcag agacagagtg
     7261 gtgccggaaa tgatggaaaa cccaagagta ttagtcctta caggtgcagg aatttctgca
     7321 gagtctggta ttcgtacgtt tcgcgcggcg gatggccttt gggaagagca tcgggttgaa
     7381 gacgtggcaa cgccggaagg attcgcccgt aatccggggc tggtgcagac attttataat
     7441 gcccgccgtc agcagcttca acagccggaa atacaaccca atgcggcgca tctggcgtta
     7501 gcgaagcttg aagaagcgct tggcgatcgc tttttgctgg tgacgcaaaa catcgacaat
     7561 ttgcatgaac gcgcgggcaa ccgcaacatc attcatatgc atggcgagct gttgaaggtg
     7621 cgctgttcgc aaagcggcca gattctggaa tggaacggcg atgtgatgcc ggaagataaa
     7681 tgtcactgct gccagttccc ggcgccgcta cgtccgcacg tggtgtggtt tggcgagatg
     7741 ccgcttggca tggatgaaat ttatatggcg ctgtcgatgg cggatatttt tatcgccatt
     7801 ggcacatccg gtcatgtcta tccggctgcg ggttttgtgc atgaagcaaa actgcacggc
     7861 gcacatacgg tggaactgaa tcttgagcca agccaggtcg gcagcgagtt tgaagagaag
     7921 cactacggcc cggcaagcca ggttgtgccg gaatttgttg ataaattcct gaaagggctg
     7981 tagtgccgtt tgcccggtaa cgccttatcc ggcctacatt tcacgttacg ttcatctgta
     8041 ggcccgacag gcgctttggc tgaattagcg tcctgctttt agcttctgat aatactcttc
     8101 ataaatggcg ctggcgtcgc cgacatcgtt ttgccactcg cctttgctga tggtttgcgc
     8161 atccggatag agcgacttat cattggcgac ctccgggctt aacagcttac gcgccgccag
     8221 gttgggggta gggtagccga tggtttctgc cacctctttc gcgacgtcag gacgcagcag
     8281 gaagttgatt agcttcagcg cgccctcttt atttttcgcg tttgccggaa tagccaggct
     8341 atccatccag aaaataccgc cttctttcgg ccagacgacc tccagcggcg tgccagcctg
     8401 acgagcaacg aaggccgaac cgttccacac catccccaga ttgacttccc cttccatata
     8461 cggattcgcc ggattatcgg agttgaaggc cgctacgttc ggcatcagtt ttttcaactc
     8521 ttcatatgcc gcttcgatct ctttaggatc ggtagtgtta ccggaataac ctagcttgcg
     8581 cagcgccatc tggaagactt ctcgcgcatc gtcggttaaa agcaggctgt ttttatattc
     8641 cggtttccac aaatcagccc agctggtaat ggtttttgga tcgatagcat cgctgttcac
     8701 gccaatcgcc gttgcgcccc agatatacgg aacagaataa tcgttgttgg ggtcaaacgg
     8761 tttgttgagc atttccggat cgaggttgtg gaaattggtt aatttcgact tatcgatctt
     8821 ctggatcatg ccttctttgc gcattttgtc gacatagtat gtagaaggaa caaccaggtc
     8881 atacgcgcca tctttatagg ttttgagttt ggcatacatg gtttcgttcg actcgtaggt
     8941 cgaataaatc accttaatgc ctgtctcttt agtgaactgt tccagcaggc ccggcggtac
     9001 atactcagtc cagttataga aatagagcgt gtcgttgtcg gaggcatgag cggcactcat
     9061 acccagcgcc agggcgcctg ccgcgagcag gtggcgtgac cattttttca tttaacgtcc
     9121 cctgaattac gggccttatc ggcccttggt tttatcacga gcaataagct ggctggcaat
     9181 gaccattacc agagacagca ccaataaaac ggtcgccagc gcgttcactt ctggtgaaac
     9241 gccgactttt accatggaat aaatctttaa gggtaaaatt tcatagcccg gcccggtgac
     9301 aaacgacgag actactacat cgtccatcga caacgtaaag ctcagcaacc agcccgccgc
     9361 caccgccggc atcgccagcg gcagaatgat tttgcgtaaa atcgttacct cactggcccc
     9421 caggtctttt gcggcttcca gcattctgac atcaaagcct ttcaggcgcg aatagaccgt
     9481 gacgaccaca aacggcaggc taaaggtgat gtgcgagaac agcaacgacc aaaagcccag
     9541 ttgaatgccg agtaacataa acagcaccag cagggagatc gccatcacga tatccggcga
     9601 catcattact acaaacagca tcccgctgac gaatggcttc ccgcgaaagc ggtagcgata
     9661 aagcgctacc gcggttaacg agccaatcaa cgtggcgaag gtcgctgaga aaatcgccat
     9721 cgtcagtgaa tgttgagcgg cctgtaacag actgtcgtta ttgaccagta gttcgtacca
     9781 tttagtggta aagccctgcc agttaatgcc gaaccgcgaa ctgttgaagg agttcacgat
     9841 cagaataatg atgggaatat acagatacgc atagatggca gtcatgaaac cgccacggag
     9901 cagccgaccg atcattcaag ttccaccttc ttattcagag gatggggtgc ttttagagta
     9961 ttgaaaatga tcaatttttt ctcttctcca aaatctctcc aaaacgtctc gcggttatca
    10021 gcagccagga agaagcaagc tgccgcttga agccgcgaat tttacaacaa attgccagac
    10081 gagcgggaaa aaaaggccat ttaaatgact attctcatcc gatccggtca tatgcggcat
    10141 tattgcgcca ggcaagaggt tactctgtag gcaaacatga agtacgtgag taaaccctga
    10201 acgtgacgtc tgagaaagcg tcgtctgatt ttataaaaaa caacataaat agccgctttg
    10261 ttgttctgag cgaacgtgta gcgtggttaa ctgttcttcc gccatttttt gtatagactg
    10321 gggggctatt ctaaaaatgg cgtgaaaaac ctgatcagag atggcttcga ctatctcagc
    10381 taacatgctt aggctggcgc tgggatccgt tacaaggaac gcctgaaacg tcttatccgc
    10441 cagtaaaacc tcttctacca ttttttcaat aggtatgtgg gtatgtggtg gtggtatttc
    10501 aagctgtttt aagccacaca tcgtcattgt ttctaaaaat gcgttttgct gagtactttc
    10561 ggatatattc gcatgctgta aaatgcgcgt tgtcttttca atcccagact gaattttcgc
    10621 tgccaggtag gttgcctttt cttgcgtttt ccactcatct aaatttcctt ttctccattc
    10681 agaatataaa tacccctcta tgttgtctaa tggaaccgat aatgtcggcg cgccagcagg
    10741 gttgagacat aatgtcgaag ggagggggta atctacgatt tcgctatatc ttctattaat
    10801 catggccgtc atttgtggat gcggttttaa aatatcgggg cgatctttta ttaaaaaata
    10861 agcattcccc atgacttcac agctaaaggt atcggtattt tgagtgatac gtaacaattc
    10921 gttttcttcg ttttgatcca tgatgcgaag aataatcgtg tcatcatttt catgaggatt
    10981 atgaacctga aatctatctc tttgcgatgc gcaggctaac tcttttaact caaaaaaaat
    11041 ctctgtaaat cgctctcgtg tgggggtgcg atcggcaaac aacatctcat gtagacaacg
    11101 gtccgctttt gctttgccag tagaaaaaaa gaagtcttta attttttccc ataaaacttt
    11161 ccaccatgct tctttcgtat tccttgggga gttggtaagg atttcacttt ttaaaaaacc
    11221 attccctata gtaatcggca tattaatctc acttatactg gagtaaaaat gactacataa
    11281 ttgattaaat caactctttt tatctcaact gcgggcgcat cggatgtaat ataattttta
    11341 aaagagactg gcaatcagta taaaacctga gagcttcgcg tataaacgca ttactgtctg
    11401 cgatagcgtc gctacaggta aaaataaaag aaggcctacc gcggatgatg ttgtagattt
    11461 gcaatactgg cggcaacttc tttcatgcgt tttttatgcc ggaggcatga agtttaccct
    11521 tgaataaact tcatgcctgg atgcgtgtgg atttgttagc gttgcgcaat taatcgctta
    11581 tatcactcac cttcttattc aataagcggg aagcccgcca gtaaatcaac agcatgagtc
    11641 ccatcacaat ggtcagcgta atgctggtag ccgcgccaaa cggccagtcg cgaatattca
    11701 ggaactgtac cttaatgacg ttaccaatca gcaggttttt cgcgccaccc attaaatcgg
    11761 agacgtagaa caggcccatt gccggtagca tcacgagcag gcaaccggcg acaatgcccg
    11821 gcatggttaa tggaataatg atgcggatga acgtttgcat tttactggca ccgagatcgc
    11881 gagcggcctc cagtagcggt ttgtcgagct tctcaatgct ggagtagagc ggcatgacca
    11941 taaacggcag caaaatgtaa accaggccga taataacggc gctcggggtg aacatgatgc
    12001 gaatcggcgt atcaatcacg cccagccaca gcaggaattc attgagataa cctttagtgc
    12061 tcaggaatat ttttagccca tagatgcgga tcagtgagtt ggtccagaaa ggaacaatca
    12121 gcaaaaacag caataacgga cgtatctttt ccggtaactt cgccagaaac caggcgaaag
    12181 gatagcccag caccaggcag gagagggtgg cgatcagcgc catattcaga gagtgcagga
    12241 gcacttcaaa atagagcgga tcgagcaggc gtgcgtagtt atccagcgta aagaccatct
    12301 tgacgaaact ggcgtcgtca cgggtcagaa agctggtgcc aatgatcatc aggttgggca
    12361 gaaaaacaaa caacacaagc caaccgacga tagtgacaat cactacattc tggaatttac
    12421 ttgtgttctt catcagccag tacgacctcc cagctttcta cccaactaat ggccattttt
    12481 tggtcaagtg aatggtcgaa gtcaggatcg tcttcgttga agaattcgct gaccatcacc
    12541 attttgccat tttccagttc aaccaccgac tccagcgtca tacctttgta attgcgctcg
    12601 cgcacgtagc cgataagccc ttcgatgtgg ttatcatcgt tgatctcttc gacgcgtaga
    12661 tcttccggtc gcagcaggac gttcagtttt tggcccagtt cgacagcgaa attgacgtat
    12721 atattgcact cccgaccttc tacgctggcg cggacgcgct gttcatcaag ccgttcaatg
    12781 acggttgcgt caaagcggtt aatttcgccg ataaaaccgg cgacaaacag gttttttggc
    12841 tcttcataga tttcacgcgg cgtgccgtct tgctcaatca cgccattacg cattaccacg
    12901 atacgatcgg acatggtgag cgcttcttcc tgatcgtgag tgacaaaaac aaacgtgata
    12961 ccgagtttac gctgtaatgc tttaagctcg ttctgcattt gtttgcgcaa tttatagtcc
    13021 agcgcggaga gcgattcgtc cagtaataac aggcgaggtt tattcaccac cgcgcgagcg
    13081 atagccacac gctgctgctg tccgccggaa agctggtgcg gtttacgttg tgcaaactct
    13141 tcaagctgca ccatacgcag cgcatcggtc acgcgaggcg ctatctcggc ggctggtgtt
    13201 ttttgcattc gtaagccaaa cgcgacattt tcaaacaccg tcatatgcgg aaataaagcg
    13261 tagctttgaa atacggtatt tacataacga ttttcggcgg gaacgtgggt gatatcctgg
    13321 ttatccaaca tgatatgccc ggcatcaacg gtttccaggc cggcaatcag gcgaagaacg
    13381 gttgttttac cgcagccgga agggccaagc agcgtgagga attcgccatt gttaatggtc
    13441 aaatccagct gtgaaatgac ctctttgcca tcgaaacttt tgctaattcc cgacaaaagc
    13501 accagcggtg aaagcgaacg cggttgttta ttcaatttct tactctgtcc catgtaaacg
    13561 caacggatgg ctgaccgctg cggggtttgt ggttaaccac cttaatcact cttaatgagg
    13621 gcggtcattc tacggcaaac caccgtgatc gccaatcctt gttgcgaatt actgacttag
    13681 ctttatagtc agaaagcgtg tcaaagtgaa atattcttgt ttgcagggat aaaagtgacc
    13741 tgacgcaata tttgtctttt cttgcttatt aataatgttg tcacgaaaag tgagggtgac
    13801 tgcatggata aactacttga gcgtttttta cactacgtat cgctggatac ccaatcaaag
    13861 tcgggtgttc ggcaggttcc cagcactgag gggcagtgga agttactacg tttgctcaaa
    13921 cagcagctcg aagagatggg gctggttaac attacattaa gtgaaaaagg gacgttgatg
    13981 gcgacgctcc cggccaatgt tgagggggat attcccgcca ttggttttat ctcccatgtg
    14041 gatacctctc cggatttcag cggtaaaaac gttaacccgc agattgtcga gaattatcgc
    14101 ggcggcgata tagcattagg gattggcgat gaggtgttgt cacccgtgat gttcccggta
    14161 ctgcatcaat tactgggaca gacgctgatt actaccgatg gtaagacatt gctgggcgcg
    14221 gacgataaag ccggtgttgc ggagatcatg accgcgctgg cggtgctgaa aggtaatcct
    14281 attccccacg gcgaaattaa agtggcgttt acgcctgacg aagaggtagg gaaaggcgcg
    14341 aagcacttcg atgttgagga atttggcgcg cagtgggcct atacggtcga cggcggcggc
    14401 gtgggagaac tggagtttga aaacttcaat gccgcctcgg tgaatatcaa aatcgtcggc
    14461 aataacgtgc atcctggtac ggcgaaaggc gtgatggtca atgcgctgtc gttggcggcg
    14521 aggattcacg cggaagtgcc ggcggatgaa gcgcctgaaa ccactgaagg ttacgaaggg
    14581 ttttatcatc tggccagcat gaaaggcacc gttgaccggg ccgaaatgca ctacatcatt
    14641 cgcgatttcg accgtaagca gtttgaagcg cgtaaacgca aaatgatgga gattgccaaa
    14701 aaagtcggca aggggctgca tccggactgc tatatcgaac tggtgattga agacagttat
    14761 tacaatatgc gcgaaaaagt ggttgagcat ccgcatattc tcgatatcgc ccagcaggcc
    14821 atgcgcgact gtcatattac gccggagatg aaaccaattc gcggcggtac agacggggcg
    14881 caactgtcgt ttatgggcct gccgtgtcct aatctcttta ccggcggata taactatcat
    14941 ggtaaacatg agtttgtgac gctggagggg atggaaaaag cggtacaggt gattgtacgt
    15001 atcgcggagc tgacgggtaa gcgcggccag tagcgaatgt tacacattgt ggtgaagcgt
    15061 tttattattt atggcgggat attttccgcc ataaattttt ctgcctggag cgccgaatat
    15121 acgccttcct ggtcccagcg ccagcaacaa tctgcagcat gttttatgac cggcgatgaa
    15181 acctgcatga cgtttattga tgatgcggtg aggctggcct cgcggcaata tggcaaacgc
    15241 tcaatacagc ttgttcgtag cctgctatta caaagcgata tttatcaatg gctgggtaaa
    15301 ccggagttaa cgccgcaaat gctgctgcga gcgcgggcaa tcatgaaaac atttccggcg
    15361 ggcacttatc cgggcgatcg ggccgatatg tttgaacacc tggcggcctt ttatgtttac
    15421 ggtgacgatc gccatataga gtattcaccg acagagcagt ggcgatacga gatcaaggtt
    15481 gattaccgtc agcggatagc ctggcaagag caggcattaa cgtggcgtct taaagacaaa
    15541 aagacatcga cggaagcgtt ggtttatacc ttaaacagga tgcgcgacgc ttattctgat
    15601 gcgctggaag agcgggatgt cgaatgtgat agtgcgcgta aagcctatta tttggcgaag
    15661 atagacgcag cggagcggca gtggctgagc gttattttac gggataaaac ctgggataat
    15721 cgtgagcgcg tcgcctcttt tttgcagcag aaagcggata ttgcttataa tgcagggcat
    15781 attagcgagg cgattaatgc gctaagtcag gcgctaaaaa ttgagcaaac gctttatggc
    15841 accgaattcg gcgaaatgac ggttgacagc aataatcttg ctggctttta tgcacagggc
    15901 catcattata aggaagcgaa agatctctac cttaaactta tcgcgtatta ccagagccgt
    15961 ttaacgccaa tggcgacggt aatatcacga ttacgctttt atttgcccga aaacatcgac
    16021 ctggacagta cctcccccta tctcccattg ctggaagaat ataaacgtcg gcagtccgac
    16081 gtatccatgg tgttgtatgg tatttcgctg ctttataaga ataatcaaca gcttgaacaa
    16141 gcaaaagact ttgcggaacg cgcctttacg cttgatgccg tagcttatcc agcaaagatg
    16201 cagtatgaac gattacagca actggctaat attgccgaag gtcttggaga taacgcgcag
    16261 gcgcggcgct atcggcaaat gtcatttcgc catcgaatgg cccactcgat ttatccgggc
    16321 gatccgcaat ataacgattt cgccaaacct ggcggcgatc gttgtggata gtttgcgtca
    16381 gcccggcggt cgccgggcat tgcgatgttc ttatccttcg aaaaaccagt atccgctatt
    16441 caccagcgcc gccagcatcg cgaggaagga agggtcttcc agcgcatcgc cgaagttttc
    16501 agcggtcagt acaatatgac tggtgagcgc ttccagagcg gggcgatgcg gagagtctat
    16561 tttttcgcca ttcgcataga cttcatcgcc gatacgcaat acgcgaagcc cgccgagacg
    16621 tactaatgcc tcgccttgct ttaaggcatc gtaaatttcg tctggctgat acggcggctc
    16681 cggcggcgca atatccagtt cgtggcgtga ctgagagata aactcgccaa gccactgttg
    16741 gaaatgcgcg ggctgattga tcaaatcgag catcatatta cgcagtttat ccatctcctg
    16801 cggcaggata tccgccggat gtttgcggga cggcatatcc ggatcgctgt agtatgtgtt
    16861 gcccagatcc cgttgcagga cgtaatcggc aaaaccgctg atcagctcac ggctattggg
    16921 cgcgcgaaaa ccgactgaat agttcatggc gttttccagc gcataccctt catgcgggaa
    16981 tccaggcgga atatacagaa tgtcgcccgg ctccagctct tcgtcaataa tggcctcgaa
    17041 cggatcgact tgtaacaggt cgggatgcgg gcagtgctga cgcatttgca gcttttcgcc
    17101 cacgcgccag cgacggcgac cggttccctg gataataaac acatcatact gatccagatg
    17161 cgggccaacg ccgccaccgg gaacggaaaa ggagatcatc agatcgtcga tacgccagtc
    17221 cggcagagcg cggaacgggc gcatcagcgc ggcggtgggt tcatgccagt ggtttaccgc
    17281 ctgtaccagc agcgaccagt tgctctcacc cagatgatcg tagctttcga aagggccatg
    17341 gctgacctgc catttgccat cctgatggct aacgagacgg ctgtcgattt cgctttccat
    17401 cgccagcccc gccagctcat ccggcgagag cggatcaata aagttggtaa acccacgttt
    17461 taagaccacc gggcgttttt gccagtggcg ttcaagaaag tcgggccagt taagagttaa
    17521 ttggtattcc atgttaagta tccgcaggct ggtatctgac accgattata acggatgctt
    17581 aacgagatgc gtggaagaac gcacagaaat gtttattcct ctttctgtgt gggatgctgt
    17641 cggccaaaaa cgacctccat acgggcgcca ccgagcagac tgtcgctggc aatgatctgc
    17701 ccggcgtatt gttccgtaat ctcgcgcgcg acagccagcc ccacgccttg tcctggtcgt
    17761 agggtatcgg cgcgctgacc gcgatcaaac accagggaac gtttgctgtg gggtatgcct
    17821 gggccgtcat cttcgacgaa aatatgcaaa tgatcgtcgg tctggcgagc cgaaatctcg
    17881 acaaactcca gacaatattt acaagcgttg tccagtacgt tgcccattac ttcgacaaag
    17941 tcgttttgct cgccgacaaa actgatctct ggtgaaatat ccatactgat attcacccct
    18001 ttacgctgat aaactttatt gagcgcggag atcaggttat ctaacaacgg cgcgacggga
    18061 tgcagttcgc ggcttaacaa cacgccgcta ccgcgcatac tggcgcgatg cagataatag
    18121 ccgatctgct gggaaatccg actgatctgt tccagcatca ccggttcagc tttgctgacg
    18181 ctcatctttt cgttgcgtaa agagcgtaac gtactctgca aaaccgcgag cggcgttttt
    18241 aaactgtgcg tcaggtcggt tagggtcgtg cggtatttgt tataacgttc gcgctcgctt
    18301 ttgagcagtt gattaaggtt gcgcacaagg ctggtcagct cacgcgtcgt ctccggattg
    18361 agcatttcgc ggtgatgatc ttcaagttcg cggacttccc gcgccagcgc ctcgataggg
    18421 cgtaagctcc accaggcggc gatccacagt aaaggaatga ctaacagtaa attggcggcc
    18481 agcacgtata cgaaccagct ccacaccata taggagcgtt ttagctctat cggaatggta
    18541 tcgaccacca cgatggttaa ctgcggcatc cgcgtcgtgg caggataaat atttaccgct
    18601 accgagtggg tcatctccgc atcatcgtca tcttcacgta cttctttgag tttttcctgc
    18661 gcggaatggt cctcgctcaa cagcgtgctg gtggcgtcta cgttggtttc aatttcatgg
    18721 aagccgttcg tttttaacca ttccggttga atgcttttaa tcagccaggg gatgttgcgc
    18781 tgcgtccata ataatttgcc cgtttcatcg taaatcagcg tcatggtcgg gctttgcatg
    18841 tccagatttt caggcagctc aacgctgatt ttattatttt cccatttggc gagggtataa
    18901 aacaggttgc tttcgccgcg cagcagacga aacgtggttt tatcaaaact tacgctatag
    18961 ccgaccagcg ccactatgcc atatgccaga gaaagcacca gcacgacgcc ggctgtcgcc
    19021 agcaaaaaac gaacccgcag cgacagcggc agaaaatggc gagcaaattt attcattagc
    19081 gcaattcaaa aagatatcct tgtccgcgta cggtggtaat gacatcgtgc ggatactggg
    19141 cctgtatttt tttccgcaga cgccccatga gaacatcaat ggtatgactt tcccgcagtt
    19201 ccgcatccgg atacagctga agcatcagag aatctttgct gaccacttta ccgttgttac
    19261 ggataagcgt ttccataatg gtgtattcga acgccgtgag tttgatgacc tcttcattga
    19321 cggataattc ccggcgtgag agatccacct ggaaaggcga gatgttgatc acctgggagg
    19381 ccagaccgct attacggcgc attaacgcct gcatacgcgc cattacctct tcgatgtgga
    19441 atggcttcgt cacgtagtca tcggccccgg agctgagaac ctcgacttta tcctgccagc
    19501 cttcgcgcgc ggttaacacc agaaccggca gtgaaacatc actgctgcgc cagcggcgta
    19561 ttaaggaaag gccgtcttca tccggcagac ctaaatcgac aatagcgata tccggaaggt
    19621 gttcattaag gtagtaatca gcttccctgg catcttctgc ggcatcgacc tggtgacctg
    19681 aatcctggag ctgaaccttc aggtggtggc gtaataatgc attatcctct acaaccagta
    19741 cgcgcatcat ctcttctccc ttgtgttaac aataagaaca gtctagcgtt gattatggtg
    19801 ctttggggat aaacagttaa taaaccagac aaatagtcac cctctttctg aagaaaagag
    19861 ggtgaggcac acattattta agttcgtcga ccagattcac agcgcgaccg atataatttg
    19921 ccggcgtcat ggctttaagg cgcgtttttt ctgcttccgg cagggccaga ctatcaataa
    19981 gctgtttcat tccttcggca tcgacacgct tgccacgggt caactctttc agtttttcat
    20041 atggtttttc aatgccatag cggcgcatga cggtctggat cggttcggct aatacttccc
    20101 agttgtgatc cagttcgtca agcagatgat cgcggttcac ttccagcttg ctgacgccct
    20161 tcagggtcga ctgataagcg ataagcgcat agccgatgcc gacacccagg ttacgcagga
    20221 cggttgagtc ggtcagatcg cgctgccagc gggaaaccgg cagtttgttt gccagatggt
    20281 gcaacactgc attagacaga ccgaggttgc cttctgagtt ttcaaagtca atggggttaa
    20341 ctttatgcgg catggtagaa gaaccgatct ctccggcgat ggttttctgt ttgaaatggt
    20401 tcaacgcaat atagccccag acatcgcgat cgaaatcgat caggatggtg ttaaagcgcg
    20461 cgatacagtc aaacagttcc gcaatataat catgcggttc aatctgggtg gtgtaagggt
    20521 tccactggat gcccagcgag gtgacgaact cttcgctgaa ctgatgccag tcaacttccg
    20581 gataggcggc gatatgcgcg ttatagttgc ctacggcgcc gttaatttta ccgaggatct
    20641 ccacctgatt gagctggcgg aactgacgct ccatccgata cgccacgttc gccatctctt
    20701 tacccagagt ggaaggtgtt gccggctggc cgtgggtgcg ggagagcaga ggaatatcgc
    20761 gatactgcgt ggcgagatct ttaaccgcgt taatcacctg acgccagtaa ggcaggatca
    20821 cttcatcgcg cgcagttttg agcattaacg cgtgcgacag gttgttaata tcctcagagg
    20881 tgcaggcaaa gtggataaat tcggaaacgt catgtagcgc cgggatcgcg gcggcttttt
    20941 ctttcagaaa atactcaacc gctttcacat cgtgattcgt ggtgcgctca atggttttaa
    21001 tgcgcgcggc atcttcttca ttgaagtttg ccacaagcgt atccaggtaa ccgtttgcgt
    21061 cggcagcaaa agcaggaact tccttgatcg ctgcgtgcgc ggctaatttc tgcagccaac
    21121 gtacttcgac ttgtacacga aatttcagca aaccgtattc gctaaaaatt ccgcgcagcg
    21181 cgctgacttt atcgccgtag cgtccatcga caggggaaac ggcggtcagt gaggataatt
    21241 ccatagatca taactccggg gttaaataag caagaatttg ttttgcctga gtcgtcaggc
    21301 gatgacgaga aaacataagc tgtaggcgac caccgcctac ctgatgccag agcacggctg
    21361 cacggatgcc tgccagtagc gaggcgcgga ctttggcctg cacctgcgga ctttgcagaa
    21421 cggccgggga gcccgtcacc tgaatgcgcg ggcccaatgg gctaatcaca tccacgtaga
    21481 tgcccgccat ggcgctcatt aacgtgtctg actgtaaatc aaaatggtca agctggcgct
    21541 gcaggccgtt aatgcgatcg cctaacgtat tcaacgcgcc tttggcggat gacagcttgc
    21601 gctccagcac catcaggcta agcgtataac gcgtcagttc ggcgttaagt ccttgtcggc
    21661 tgctggcatt cagcacgccg agcagtgttt ccagaccaag acgcaggtta gcctcgctgc
    21721 cgccgaacac gcccagagta gaactgggat tcatatcaat gacactgttg agtgaaacgt
    21781 gcaacgcgtc ggcatcacag tgtccctggt gcgccagttg ttgcaccagg cgtgccgact
    21841 ggcaaatgcc agacagcgcg agggtgatgt cataataatt ctttgccaca atcactgctt
    21901 ccttgtatca aataaaatac acttcatctt ttaagccgct ttgaggtgac ttgaatggtg
    21961 ttgtgtattg aataatcaga ccgtcagcgg cagtcgctgc tcgataatgc cgccgcccag
    22021 gcagacttct ccgctgtaaa agacagcgga ctggcccggc gtaacggcgg caaccggctc
    22081 gtcaaaaatg acctcgatac gatcgtcatc cagcgcgtta atcgtgcacg gaatatcggt
    22141 ctggcggtag cgggttttta ccgtacagcg cagggtgccg gtgaacggtt cgcgatcgac
    22201 ccaatgtagc tgctgggcga tgaggcctac cgacatcagg cgtgggtgct catgcccctg
    22261 ggcgacaatt aacacattgt tttcaacgtc tttatccacc acataccagg ggtcttcgct
    22321 accgtctttg gtgccgccaa ttcccagccc tttacgctga ccgagcgtat gatacatcag
    22381 accctgatgc tcgccgattt catcgccgtc aacagtaatg attttccccg gctgcgcagg
    22441 cagatagcgc cctaaaaagt cgcggaattt gcgctcgccg ataaagcaga taccggtaga
    22501 atcttttttc ttggcggtta ccagccccaa atcttcggcg attttacgca cctgcggttt
    22561 ttccagctcg ccaaccggga acagactttg cgcaatctgc tcatggccaa gcgtatagag
    22621 gaagtagctc tgatctttgt taccgtcgag cccgcgcaac aaccggcttt tgccgtttac
    22681 atccgcgcgg cgaacgtagt gaccggtggc gatatagtcg gcgcctaaat cttctgcggc
    22741 aaattcaagg aaggctttaa atttgatctc tttattgcac agaatatccg gattcggcgt
    22801 acggcccgct ttgtactctt caaggaacag ttcaaagacg ttatcccaat attctgcggc
    22861 aaaattaacg gtatgcagtt caatgccaag cttgtcgcac acggcctgcg cgtcagccag
    22921 atcggctgcc gcggtgcagt attcctcacc atcgtcctct tcccagttct tcatgaacag
    22981 gccttctacc tgataaccct gttgttgcaa cagccaggcg gaaacggagg aatcgacacc
    23041 gccggacatg ccgacgatca ctttttttgg gctttctgac attggaatac tcgcgacatt
    23101 gaacttcaag gcggcgtatt ctatcacgca gccctttact tgacaccctc tgtaaacggc
    23161 cagttaaatt cgcccactat agataagggg taacgttgtc ccgtttgata actgcgaatg
    23221 ctttcagcca ccagcggaga acgtaaattc ggcgcgttca gaatctcgtc ggcgctcacc
    23281 caacggcagc aatcgatgtc attgtcatgg ggggcggtcg cgcaaatatg atcaagcttg
    23341 atagcgaata aaaagcgcag gaacggggtt ttatccggcg caatccactg atgcatacgg
    23401 ataaaatact gtggttgcgc cgtgatgcca gtctcttccc acagttctcg cgcggcggcc
    23461 tgcgccagcg tttcatctgc ctccaggtgt ccggcaggtt gattccataa cgatttaccg
    23521 ttgatggtct cttccaccac cagaaattta tcttcggcat gtacgatgca ggcaacggtc
    23581 acgtgcggct tgaacatagg catccttatt aaagcggttt atcaatgtgg tcatagatcg
    23641 cgtcaagctg tttcagacgc tcgttataag cttttgtcag gcaggtgacg tcggccttgc
    23701 actgctgacg ctgtttaagc cagctctgct gggcgtcctg cagcgcgccg cgactgccca
    23761 tcgcgaacaa ccctttcaga aactgatatt tggtgtgcat ttccacgtct ttatcattca
    23821 gcgtcaggtg cgcgcagata gccttttcat ccgcagcctg cgctttctgg cagtcgaagc
    23881 tggccgcatt aacggataac ggtgttaata aagcaaaagc aatgagaagc cgtttcatct
    23941 gtctttctcc tgtgcgatct cgcaccactg tccattatcg aggccgttga gcgtgtagtc
    24001 gcccatgctg taacgaatta atcgtagagt gggatgaccg acatgcgctg tcatgcgtct
    24061 tacctggtgg ttgcggcctt catataaggt gacttttagc caactggtgg gaatattctt
    24121 ccgttcgcga atcggcgggg tgcgcggcca cagccagtca ggctccgcga caatctcaat
    24181 accggcgggc agggtagggc catcgttgag cgtgacgcca gtacgaagcg cctgcagcgc
    24241 tgcattatcc gggatgcctt ctacctgaac atagtaaatc ttgccggtgc gtttgcccgg
    24301 ttgcgtgagg cgcgcctgca gcgcgccgtc attagtcagc accaaaagcc cttcgctgtc
    24361 gcggtccagg cggcctgcgg cataaacgcc ttgcacagga ataaaatctt ttaacgtgcg
    24421 gcgacctgct tcatccgtga actgcggcaa cacatcgtaa ggtttattga acaaaaccac
    24481 gcgttttggc tggttttctt tccgtgattt agatgcttgt cgtgagctga atcgcttaac
    24541 gtagtgattt ctaaaagaag ttttttgcat ggtgttttca gaacttatta attgccgcat
    24601 tatagcgcaa taatgagtgt ctttcatggc ggcaaacaat agggtagtat tgacatgctc
    24661 attacaaaac attaacaaaa aattgctcta acgcagtcgt gcagcaggac gccattgcac
    24721 atgcagcgcg atgacagacg agcaaaccag aagcgctcga aggagaggtg aatggaaagc
    24781 aaagtagttg ttccggtgga aggtaagaag atcaccctgc aaaacggcaa actcaacgtt
    24841 cctgagaatc cgattatccc gtttattgaa ggcgatggta tcggtgttga tgtcactcca
    24901 gccatgctta aagtggtcga tgccgccgtc gagaaagcct ataaaggcga gcgtaaaatt
    24961 tcctggatgg aaatttacac cggagaaaaa tccacacagg tttacggcca ggatgtctgg
    25021 cttcccgctg aaacccttga tttaattcgt gactaccgcg tagcgattaa aggtccattg
    25081 accacgccgg ttggcggcgg tatccgctct ctgaacgttg ccctgcgtca ggagcttgac
    25141 ctgtacgttt gtctgcgtcc cgttcgttac tatcagggca cgccaagtcc ggtgaaacat
    25201 ccggagctga ccgatatggt catcttccgt gaaaactctg aagacatcta cgccggaatt
    25261 gaatggaaag ctgactctgc agacgctgag aaagtgatca agttcctgcg cgaagagatg
    25321 ggcgtgaaga aaattcgctt cccggagcac tgcggtatcg gtatcaaacc gtgttctgaa
    25381 gaaggcacta aacgtctggt tcgcgcggcg attgaatacg ctattaccaa cgatcgcgat
    25441 tccgtcacgc tggtacataa aggcaatatc atgaagttca ccgaaggcgc gtttaaagac
    25501 tggggctacc agttggcgcg cgacgagttc ggcggtgagc ttattgacgg cggtccgtgg
    25561 ctgaaaatta agaacccgaa cacgggtaaa gagatcgtgg ttaaagacgt tatcgccgat
    25621 gcgttcctgc aacaaatcct gttgcgtccg gcggaatacg acgttatcgc ctgtatgaac
    25681 ctgaacggtg actatatttc cgatgccctg gcggctcagg ttggcggtat cggtattgca
    25741 ccgggtgcga atatcggcga cgaatgcgcg ttgtttgaag cgactcacgg gactgcgccg
    25801 aaatatgcgg gccaggataa agtcaaccca ggctccatta ttctgtctgc ggagatgatg
    25861 ctgcgccaca tgcagtggtt cgaagcggcg gatctgattg ttaaaggtat ggaaggcgcg
    25921 attgccgcga agaccgtgac ctatgacttt gaacgcctga tggacggcgc taagctgctg
    25981 aaatgtagtg agtttggcga cgcgattatc gcaaatatgt aatatcgata attgttaaaa
    26041 acaaaaacgg gggcttaacg tccccgtttt t
//
LOCUS       DAGWFR010000046        26054 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.047, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000046 DAGWFR010000000
VERSION     DAGWFR010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 26054)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26054)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26054
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.047"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..220
                     /locus_tag="MOX77_001942"
     CDS             <1..220
                     /locus_tag="MOX77_001942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycerol kinase"
                     /protein_id="HCA3357484.1"
                     /translation="VERPEVREVTALGAAYLAGLAVGYWQNLDELQEKAVIEREFRPG
                     IETTERNYRYSGWKKAVKRAMAWEEHDK"
     gene            332..1342
                     /gene="glpX"
                     /locus_tag="MOX77_001943"
     CDS             332..1342
                     /gene="glpX"
                     /locus_tag="MOX77_001943"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphatase"
                     /protein_id="HCA3357485.1"
                     /translation="MRRELAIEFSRVTEAAALAGYKWLGRGDKNTADGAAVNAMRIML
                     NQVNIDGTIVIGEGEIDEAPMLYIGEKVGTGHGDAVDIAVDPIEGTRMTAMGQANALA
                     VLAVGDKGCFLNAPDMYMEKLIVGPGAKGAIDLNLPLADNLRNIADALGKPLGDLTVT
                     ILAKPRHDEVIAEMAKLGVRVFAIPDGDVAASILTCMPDSEVDVLYGIGGAPEGVVSA
                     AVIRALDGDMQGRLLARHDVKGDSEENRRIGEQELARCKAMGIEAGKALCLGDMARSD
                     NVIFSATGITKGDLLEGISRKGHIATTETLLIRGKSRTIRRIQSIHYLDRKDPDVQAH
                     IL"
     gene            1439..2185
                     /gene="fpr"
                     /locus_tag="MOX77_001944"
     CDS             1439..2185
                     /gene="fpr"
                     /locus_tag="MOX77_001944"
                     /EC_number="1.18.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP(+) reductase"
                     /protein_id="HCA3357486.1"
                     /translation="MADWVTGKVTKVQNWTDALFSLTVHAPINPFTAGQFTKLGLEID
                     GERVQRAYSYVNAPDNPNLEFYLVTVPQGKLSPRLAALKPGDEVQVVSDASGFFVLDE
                     VPDCETLWMLATGTAIGPYLSILQYGQDVTRFKNLVLVHAARFAADLSYLPLMLELQQ
                     RYEGKLRIQTVVSRESVPGSLTGRVPALIENGELEKAVGLPMDKETSHVMLCGNPQMV
                     RDTQQLLKETRQMTKHLRRRPGHMTAEHYW"
     gene            complement(2292..2720)
                     /locus_tag="MOX77_001945"
     CDS             complement(2292..2720)
                     /locus_tag="MOX77_001945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF805 domain-containing protein"
                     /protein_id="HCA3357487.1"
                     /translation="MTIQQWLFSFKGRIGRRDFWIWIGLWFAGMLALFSLAGKNLLDI
                     QTAAFCLVCLLWPTAAVMVKRLHDRGRSGAWALLMILAWMLLAGNWVMLPGMWQWVVG
                     RFIPTLILVMMLIDLGAFVGVQGENKFGKATQDVKFKAEP"
     gene            2821..3417
                     /locus_tag="MOX77_001946"
     CDS             2821..3417
                     /locus_tag="MOX77_001946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YiiQ family protein"
                     /protein_id="HCA3357488.1"
                     /translation="MKPGCTLFLLLFSALTASITAHAQLSSSTTTAPYLLAGSPTFDL
                     SISQFRENFNRQNPDLPLNEFRAIENSRDKANLTRAASKINENLYASTALERGTLKVK
                     SMQITWLPIQGPEQKAAKAKALEYMAAIIRTVAPLLTKEQSQKKLQKMLIAGKGKHYY
                     AETEGAVRYVVADNGEKGLTFAVEPIKLALSENLEGAN"
     gene            3530..4297
                     /gene="tpiA"
                     /locus_tag="MOX77_001947"
     CDS             3530..4297
                     /gene="tpiA"
                     /locus_tag="MOX77_001947"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HCA3357489.1"
                     /translation="MRHPLVMGNWKLNGSRHMVNELVANLRKELTGVAGCDVAIAPPE
                     MYIDLAKRAAAGSHIMLGAQNVDLNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYH
                     KESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDTVLKTQGAAAFE
                     GAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHIAKADAKIAEQVIIQYGGSVNASNA
                     AELFAQPDIDGALVGGASLKADAFAVIVKAAEAAKQA"
     gene            complement(4389..5153)
                     /locus_tag="MOX77_001948"
     CDS             complement(4389..5153)
                     /locus_tag="MOX77_001948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HCA3357490.1"
                     /translation="MNSQFAGLTREACVALLASYPLSVGILAGQWIALHRYLQQLEAL
                     NQPLLHLDLMDGQFCPQFTVGPWAVGQLPQTFIKDVHLMVADQWAAAQACVKAGAHCI
                     TLQAEGDIHLHHTLSWLGQQTVPVIDGEMPVIRGISLCPATPLDVIIPILSDVEVIQL
                     LAVNPGYGSKMRSSDLYERVAQLLCLLGDKREGKIIVIDGSLTQDQLPSLIAQGIDRV
                     VSGSALFRDDRLVENTRSWRAMFKVAGDTTFLPSTA"
     gene            complement(5163..5453)
                     /gene="lsrG"
                     /locus_tag="MOX77_001949"
     CDS             complement(5163..5453)
                     /gene="lsrG"
                     /locus_tag="MOX77_001949"
                     /EC_number="5.3.1.32"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione
                     isomerase"
                     /protein_id="HCA3357491.1"
                     /translation="MHVTLVEINVHDDKVEQFIDVFRQNHLGSIKEPGNLRFDVLQDP
                     QVPTRFYIYEAYVDEQAVAFHKTTPHYKTCVEQLEPLMTGPRTKKVFMGLMP"
     gene            complement(5536..6411)
                     /gene="lsrF"
                     /locus_tag="MOX77_001950"
     CDS             complement(5536..6411)
                     /gene="lsrF"
                     /locus_tag="MOX77_001950"
                     /EC_number="2.3.1.245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000774144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxy-5-phosphonooxypentane-2,4-dione
                     thiolase"
                     /protein_id="HCA3357492.1"
                     /translation="MADLDDIKDGKDFHTDKPQTNTLFSLKGCGALDWGMQSRLARIF
                     NPRTRKTVMLAFDHGYFQGPTTGLERIDINIAPLFEYADVLMCTRGILRSVVPPAINK
                     PVVLRASGANSILTELSNEAVAVAMDDAVRLNSCAAAAQVYIGSEHEHQSIKNIIQLI
                     DAGLRVGMPIMAVTGVGKDMARDQRYFSLATRIAAEMGAQIIKTYYVDKGFERIAAGC
                     PVPIVIAGGKKLPEREALEMCYQAIDQGASGVDMGRNIFQSEDPVAMIKAVHAVVHHN
                     ETAERAYELFLSEKG"
     gene            complement(6440..7462)
                     /gene="lsrB"
                     /locus_tag="MOX77_001951"
     CDS             complement(6440..7462)
                     /gene="lsrB"
                     /locus_tag="MOX77_001951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autoinducer 2 ABC transporter substrate-binding
                     protein LsrB"
                     /protein_id="HCA3357493.1"
                     /translation="MARHSIKMIALLTAFGLASAVMTVQAAERIAFIPKLVGVGFFTS
                     GGNGAQEAGKALGIDVTYDGPTEPSVSGQVQLVNNFVNQGYDAIIVSAVSPDGLCPAL
                     KRAMQRGVKILTWDSDTKPECRSYYINQGTPKQLGSMLVEMAAHQVDKEKAKVAFFYS
                     SPTVTDQNQWVKEAKAKISQEHPGWEIVTTQFGYNDATKSLQTAEGIIKAYPDLDAII
                     APDANALPAAAQAAENLKRNNLAIVGFSTPNVMRPYVQRGTVKEFGLWDVVQQGKISV
                     YVANALLKNMPMNVGDSLDIPGIGKVTVSPNSEQGYHYEAKGNGIVLLPERVIFNKDN
                     IDKYDF"
     gene            complement(7491..8492)
                     /gene="lsrD"
                     /locus_tag="MOX77_001952"
     CDS             complement(7491..8492)
                     /gene="lsrD"
                     /locus_tag="MOX77_001952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autoinducer 2 ABC transporter permease LsrD"
                     /protein_id="HCA3357494.1"
                     /translation="MMNPWRRYSWEIALAALLIFEILAFGLINPRLLDINVLLFSTSD
                     FICIGIVALPLTMVIVSGGMDISFGSTIGLCAITLGVLFQLGMPLPLAIIITLLLGAI
                     CGLINAGLIIYTGVNPLVITLGTMYLFGGSALLLSGMAGATGYEGIGGFPTAFTDFAN
                     ISFLGIPMPLIFFLVCCLFFWLLMHRTHMGRNVFLIGQSARVAQYSAIPVNRTLYTVY
                     AMTGCASAIAAVLLVSYFGSARSDLGASFLMPTITAVVLGGANIYGGSGSIMGSALAA
                     LLVGFLQQGLQMAGVPNQISSALSGALLIVVVVGRSVSLHRHQILEWYSRRRNAHQA"
     gene            complement(8489..9532)
                     /gene="lsrC"
                     /locus_tag="MOX77_001953"
     CDS             complement(8489..9532)
                     /gene="lsrC"
                     /locus_tag="MOX77_001953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autoinducer 2 ABC transporter permease LsrC"
                     /protein_id="HCA3357495.1"
                     /translation="MLKFIQNNREATALLAIVCLFVFLGALDSQYLSVQTLTMVFSSA
                     QILMLLAIGATMVMLTRNIDVSVGSTTGMCAVLLGVMLNAGYSLPVACLATLILGIVA
                     GFFNGVLVAWLKIPAIVATLGTLGLYRGIMLLWTGGKWIEGLPAGLKQLSAPVFLGIS
                     AIGWFTLVLALLMAWLLAKTAFGRNFYATGDNLQGARQLGVRTEMVRIMAFSLNGGMA
                     ALAGIVFASQIGFIPNQTGTGLEMKAIAACVLEGISLLGGSGTVIGAILGAYFLTQID
                     SVLVLLRIPAWWNDFIAGLVLLGVLVFDGRLRCALQRNLRRQKYARFISPPTPLQAEA
                     KTHAQQNKNKEVA"
     gene            complement(9526..11061)
                     /gene="lsrA"
                     /locus_tag="MOX77_001954"
     CDS             complement(9526..11061)
                     /gene="lsrA"
                     /locus_tag="MOX77_001954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autoinducer 2 ABC transporter ATP-binding
                     protein LsrA"
                     /protein_id="HCA3357496.1"
                     /translation="MQISHNTASPLICVQNIYKSYSGVEVLKGIDFTLHAGEVHALLG
                     GNGAGKSTLMKIIAGIVPPDGGTIDIAGVRCSHLTPLKAHQYGIYLVPQEPLLFPSLS
                     VRENILFGLQGRQASTEKMQQLLKAMGCQLDPASAAGTLDVADRQIVEIMRGLMRDSR
                     ILILDEPTASLTPAETDRLFTRLQELLKKGVGIVFISHKLPEIRQLAHCVSVMRDGKI
                     ALFRKTHDLSTDEIIQAITPATQGVSLSASQKLWLELPGSRPQNERGATVLALESLTG
                     EGFMNINLEVRAGEILGLAGLVGAGRTELAETLYGIRPVNAGRMLFNGEEINALTTQQ
                     RLQLGLVYLPEDRQSSGLYLDASLAWNVCSLTHNQKGFWIKPQRDNATLERYHRALNI
                     KLNNAEQAARTLSGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVSARSDIYQLLRSIA
                     QQNVAVLFISSDLEEIEQMADRVYVMHQGELGGPALCGEEINVDTIMHVAFGEHGASE
                     ATC"
     gene            11317..12276
                     /gene="lsrR"
                     /locus_tag="MOX77_001955"
     CDS             11317..12276
                     /gene="lsrR"
                     /locus_tag="MOX77_001955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator LsrR"
                     /protein_id="HCA3357497.1"
                     /translation="MSDNTLVSDYGMCEEEQVARIAWFYYHDGLTQSEISERLGLTRL
                     KVSRLLEKGHQSGIIRVQINSRFEGCLEYENALRNHFALQNIRVLPALPDADIGLRLG
                     IGAAHMLMESLRPQQLLAVGFGEATMTTLKRLSGFISAQQIRLVTLSGGVGPYMTGIG
                     QLDAACSVSIMPAPLRASSQEIACTLRNENSVRDVMLTAQAADAAIVGIGAINQKDQA
                     SILKSGYITQGEQLMIGRKGAVGDILGYFFDAHGEIIPDIKIHNELIGLKLNSLSTIP
                     TVIGVAGGEQKAEAIIAAMRGNYINALVTDQKTAGKIIQLIEK"
     gene            12363..13955
                     /gene="lsrK"
                     /locus_tag="MOX77_001956"
     CDS             12363..13955
                     /gene="lsrK"
                     /locus_tag="MOX77_001956"
                     /EC_number="2.7.1.189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autoinducer-2 kinase"
                     /protein_id="HCA3357498.1"
                     /translation="MARLCTHTESGHYLMALDAGTGSVRAVIFDLQGKQIAVGQAEWQ
                     HLAVPDVPGSMEFDLAKNWQLACQCIRQALQKAAIPATAIAAVSACSMREGIVIYDSN
                     GEPIWACANVDARAAHEVSELKELHDNTFEEEVYRCSGQTLALSAIPRLLWLAHHRPD
                     IYHRASTVTMISDWMAFMLSGELAVDPSNAGTTGLLDLVTRNWKRSLLQMAGLRSDIL
                     SPVKETGTLLGHISQKAAEQCDLQAGTPVIVGGGDVQLGCLGLGVVRPAQTAVLGGTF
                     WQQVVNLPAPVTDPNMNVRINPHVIPGMVQTESISFFTGLTMRWFRDAFCAEEKLIAE
                     RLGIDAYSLLEDMASRVPPGAHGVMPIFSDVMRFKRWYHAAPSFINLSIDPEKCNKAT
                     LFRALEENAAIVSACNLQQIAAFSGVQADSLVFAGGGSKGKLWSQILADVTGLTVHVP
                     VVKEATALGCAIAAGVGVGIWPSLAETGEKLVRWDREHKPNPENFAVYQQAREKWQAV
                     YQDQRALVDGGLTTSLWKAPGL"
     gene            13969..14250
                     /locus_tag="MOX77_001957"
     CDS             13969..14250
                     /locus_tag="MOX77_001957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001173084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HCA3357499.1"
                     /translation="MQKTNEKNHEYRFSDNGPKYLIRGPGCDMGVVILQPGQSFPNHR
                     HNTACEVFYTLSGEVCLYLEGTPHILQTGDVLQCEPGEAHYLINNGDKP"
     gene            complement(14409..14549)
                     /locus_tag="MOX77_001958"
                     /pseudo
     CDS             complement(14409..14549)
                     /locus_tag="MOX77_001958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462945.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol diphosphatase"
     gene            complement(14556..14726)
                     /locus_tag="MOX77_001959"
     CDS             complement(14556..14726)
                     /locus_tag="MOX77_001959"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357500.1"
                     /translation="MSLWLSYPLILPSIIVGITILLWATSLLPEFMTALLFFAAVVAM
                     GPGKVPARAGMQ"
     gene            complement(14824..15546)
                     /locus_tag="MOX77_001960"
     CDS             complement(14824..15546)
                     /locus_tag="MOX77_001960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HCA3357501.1"
                     /translation="MQVDKTSFTPLYKQLFFIICQQIQNGSLPLGSQLPTQKEIARSY
                     NVSLIVVKQAWSELINAGIISSQRGSGSVVCSVPEGVSYGHTFRGITRDLQDASVAIE
                     NRILEIAPRRARDAQADGLSLPAQHHYLYISRIRCLNNRPFNHEKIYLDLSFFPDLQL
                     TPQALEHTSLYSLLNVTSDSAIEKVEAILPSADLCEKLQIAPNKPLLSVARQTFQAGK
                     DSPFEYCRYYVLSEYFGEIHYH"
     gene            complement(15609..16649)
                     /locus_tag="MOX77_001961"
     CDS             complement(15609..16649)
                     /locus_tag="MOX77_001961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-ribosylglycohydrolase family protein"
                     /protein_id="HCA3357502.1"
                     /translation="MHVDQNKILGCLVGAAAADAMGAATEVRTQQQIKDYFGGWVTTF
                     QKPPADTFGRCNEAGMCTDDFIQAKYIMDALLRHQREVSDEAMREAFQQWLDYPYYAN
                     FTGPTTRAAMKAIFNDNRASLQGELEGEKQSVQIINKGNAEATNGAAMKIWPAAVLHP
                     GDIDAAIDCALQICRFTHNNVLAMSGAAAMAAATSEALRAQTNADSIIAAGIYGAQRG
                     YLLAQEQGAMMVAGPSVARRIELAVDIGKRHRHWETAIVDIADIIGSGLHVSEAVPAA
                     FGLFACCPNSAVDAIISGVNIGNDTDTVATMVGAISGAFHGVEAFPADYLTTLDRMNH
                     FDLAELARQIAG"
     gene            complement(16659..17618)
                     /locus_tag="MOX77_001962"
     CDS             complement(16659..17618)
                     /locus_tag="MOX77_001962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoimidazole riboside kinase"
                     /protein_id="HCA3357503.1"
                     /translation="MKAMNKVWVIGDASVDLVPEKQNSYLKCPGGASANVGVCVARLG
                     GECGFIGCLGDDDAGRFLRQVFQDNGVDVSSLRLDAALTSAVLIVNLTADGERSFTYL
                     VHPGADTYVSPQDLPPFRQHEWFYFSSIGLTDSPAREACLEGARRMREAGGYVLFDVN
                     LRSKMWRNTDEIPELIARSAALASICKVSADELCQLSGASHWQDARYYLRDLGCDTTI
                     ISLGADGALLITAEGEFHFPAPRVDVVDTTGAGDAFVGGLLFTLSRANCWDHALLAEA
                     ISNANACGAMAVTAKGAMTALPFPDQLNTFLSSHSLAQAMTVK"
     gene            complement(17629..18963)
                     /locus_tag="MOX77_001963"
                     /pseudo
     CDS             complement(17629..18963)
                     /locus_tag="MOX77_001963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462946.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            complement(19229..19984)
                     /locus_tag="MOX77_001964"
     CDS             complement(19229..19984)
                     /locus_tag="MOX77_001964"
                     /EC_number="3.6.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol diphosphatase"
                     /protein_id="HCA3357504.1"
                     /translation="MKKTGYFLLAVIVIVAAAGVGYWKFSGNPDALREIVLERCLPDQ
                     LQHQNPAPCAEVKPRAGYVIFKDRHGPLQYLLMPTYRINGTESPLLLEPATPNFFWLA
                     WQARGYMSKKYGHDIPDSAVSLAINSRLGRSQDHLHIHISCIRPDVREQLDNDLTRIS
                     TRWLPLPGDLMGHEYLARRVTESELAQRSPFMMLAEEVPEARDHMGRYALAVVRQSDD
                     SFVLLATERNLLTLNRASAEEIQDHSCAILSSR"
     gene            complement(20085..21074)
                     /locus_tag="MOX77_001965"
     CDS             complement(20085..21074)
                     /locus_tag="MOX77_001965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter substrate-binding
                     protein"
                     /protein_id="HCA3357505.1"
                     /translation="MKKWGVGFTLLLASTSILAKDIQLLNVSYDPTRELYEQYNKAFS
                     AHWKQETGDNVVIRQSHGGSGKQATSVINGIEADVVTLALAYDVDAIAERGRIDKNWI
                     KRLPDNSAPYTSTIVFLVRKGNPKQIHDWNDLIKPGVSVITPNPKSSGGARWNYLAAW
                     GYALHHNNNDQAKAQDFVKALFKNVEVLDSGARGSTNTFVERGIGDVLIAWENEALLA
                     TNELGKDKFEIVTPSESILAEPTVSVVDKVVEKKGTNAVAEAYLKYLYSPEGQEIAAK
                     NFYRPRDADVAKKYDDAFPKLKLFTIDEVFGGWVKAQKDHFANGGTFDQISKR"
     gene            complement(21278..22240)
                     /gene="pfkA"
                     /locus_tag="MOX77_001966"
     CDS             complement(21278..22240)
                     /gene="pfkA"
                     /locus_tag="MOX77_001966"
                     /EC_number="2.7.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014072359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphofructokinase"
                     /protein_id="HCA3357506.1"
                     /translation="MIKKIGVLTSGGDAPGMNAAIRGVVRAALTEGLEVMGIYDGYLG
                     LYEDRMVQLDRYSVSDMINRGGTFLGSARFPEFRDENIRAVAIENLKKRGIDALVVIG
                     GDGSYMGAKRLTEMGFPCIGLPGTIDNDIKGTDYTIGYFTALGTVVEAIDRLRDTSSS
                     HQRISIVEVMGRYCGDLTLAAAIAGGCEFIVVPEVEFNREDLVAEIKAGIAKGKKHAI
                     VAITEHMCDVDELAHFIEKETGRETRATVLGHIQRGGSPVPYDRILASRMGAYAIDLL
                     LEGHGGRCVGIQNEQLVHHDIIDAIENMKRPFKSDWMECAKKLY"
     gene            complement(22425..23321)
                     /gene="fieF"
                     /locus_tag="MOX77_001967"
     CDS             complement(22425..23321)
                     /gene="fieF"
                     /locus_tag="MOX77_001967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462942.1"
                     /note="FieF, a metal efflux transporter, is a member of
                     the CDF (cation diffusion facilitator) family of
                     transporters; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDF family cation-efflux transporter FieF"
                     /protein_id="HCA3357507.1"
                     /translation="MNQTYGRLVSRAAIAATAMASALLLIKIFAWWYTGSVSILAALV
                     DSLVDIAASLTNLLVVRYSLQPADDEHTFGHGKAESLAALAQSMFISGSALFLTSIQN
                     LIKPTPMNDPGVGIGVTVIALICTIILVTFQRWVVRKTQSQAVRADMLHYQSDVMMNG
                     AILIALGLSWYGWHRADALFALGIGIYILYSALRMGYEAVQSLLDRALPDAERQEIID
                     IVTSWPGVSGAHDLRTRQSGPTRFIQIHLEMEDNLPLVQAHFVADQVEQAILRRFPGS
                     DVIIHQDPCSVVPREGRKFELV"
     gene            complement(23469..23969)
                     /gene="cpxP"
                     /locus_tag="MOX77_001968"
     CDS             complement(23469..23969)
                     /gene="cpxP"
                     /locus_tag="MOX77_001968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell-envelope stress modulator CpxP"
                     /protein_id="HCA3357508.1"
                     /translation="MRKVTAAVMASTLAFSFLSHAAEVVTSDNWHPGDGATQRSAQNH
                     MFDGISLTEHQRQQMRDLMQQARHEQPPVNVSEMETMHRLVTAEKFDESVVRAQAEKM
                     AQEQVARQVEMARVRNQMYRLLTPEQQAVLNEKHQQRMEQLRDVAQWQKSSSLKLLSS
                     SNSRSQ"
     gene            24120..24818
                     /gene="cpxR"
                     /locus_tag="MOX77_001969"
     CDS             24120..24818
                     /gene="cpxR"
                     /locus_tag="MOX77_001969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001033718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress response regulator transcription
                     factor CpxR"
                     /protein_id="HCA3357509.1"
                     /translation="MNKILLVDDDRELTSLLKELLEMEGFNVLVAHDGEQALELLDDS
                     IDLLLLDVMMPKKNGIDTLKALRQTHQTPVIMLTARGNELDRVLGLELGADDYLPKPF
                     NDRELVARIRAILRRSHWSEQQQSSDNGSPTLEVDALSLNPGRQEASFDGQTLELTGT
                     EFTLLYLLAQHLGQVVSREHLSQEVLGKRLTPFDRAIDMHISNLRRKLPERKDGHPWF
                     KTLRGRGYLMVSAS"
     gene            24815..>26054
                     /gene="cpxA"
                     /locus_tag="MOX77_001970"
     CDS             24815..>26054
                     /gene="cpxA"
                     /locus_tag="MOX77_001970"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress sensor histidine kinase CpxA"
                     /protein_id="HCA3357510.1"
                     /translation="MIGSLTARIFAIFWLTLALVLMLVLMLPKLDSRQMTELLDSEQR
                     QGLMIEQHVEAELANDPPNDLMWWRRLFRAIDKWAPPGQRLLLVTSEGRVIGAERSEM
                     QIIRNFIGQADNADHPQKKKYGRVEMVGPFSVRDGEDNYQLYLIRPASSSQSDFINLL
                     FDRPLLLLIVTMLVSSPLLLWLAWSLAKPARKLKNAADEVAQGNLRQHPELEAGPQEF
                     LAAGASFNQMVTALERMMTSQQRLLSDISHELRTPLTRLQLGTALLRRRGGESKELER
                     IETEAQRLDSMINDLLVMSRNQQKNALVSETMKANQLWGEVLDNAAFEAEQMGKSLTV
                     NYPPGPWPLYGNPNALESALENIVRNALRYSHTKIEVGFSVDKDGITITVDDDGPGVS
                     PEDREQIFRPFYRTDEARDRE"
BASE COUNT         6626 a         7055 c         6542 g         5831 t
ORIGIN      
        1 ggtggaacgc ccggaagtgc gcgaagtgac cgcgctgggc gccgcctatc tggctggcct
       61 ggccgtcggt tactggcaga acctggacga gctgcaggaa aaagccgtca ttgagcgaga
      121 attccgcccc ggcattgaaa ccaccgagcg taactaccgt tacagcggct ggaagaaagc
      181 ggttaaacgc gcaatggcgt gggaagagca cgacaagtaa ggtcgccatc cggcaaaatc
      241 tttgtgcgga ggcaactccg cacacacatc aattattccc tccctcccct gtgctacact
      301 gcgcgccact cctttttgct acgagtttgt tatgagacga gaacttgcca tcgaattttc
      361 ccgtgtgacc gaagcggcgg cgctggctgg ctacaaatgg ctgggacgcg gcgataaaaa
      421 taccgcggac ggcgcggcgg tcaacgccat gcgtatcatg ctcaaccagg tcaacattga
      481 cggcaccatc gtgattggcg aaggcgaaat cgacgaggcc ccgatgctct atatcggcga
      541 gaaagtcggt accggccacg gcgatgcggt agatatcgcc gtcgatccga ttgagggcac
      601 gcgcatgaca gcgatgggtc aggcgaacgc gctggcggta ctggcggtcg gcgataaagg
      661 ctgcttcctg aatgcgcccg atatgtatat ggaaaaactg attgtcggtc cgggcgccaa
      721 aggggcgatc gatctcaatc tgccgctggc ggataacctg cgcaacatcg cggatgcgct
      781 gggtaaaccg cttggcgatc tgaccgtgac cattctggca aaaccgcgtc atgacgaggt
      841 tatcgcagag atggccaaac tgggcgtacg cgtgtttgcc attcctgacg gcgacgtcgc
      901 ggcctcaatt ctgacctgta tgccggatag cgaagtcgac gtgctgtacg ggattggcgg
      961 cgcgccagaa ggcgtggtat ccgcagcggt gatccgcgcg ctggacggcg atatgcaggg
     1021 acgtctgctg gcgcgccatg acgtgaaagg cgacagcgaa gaaaaccgcc gcattggcga
     1081 acaggaactg gcgcgctgca aagcaatggg gattgaagcg ggcaaggcgt tatgcctggg
     1141 cgacatggcg cgtagcgata acgttatttt ctctgcgacc ggcatcacga aaggcgatct
     1201 gctggaagga attagccgaa aaggccatat cgccacgacg gaaacgctgc tgatccgcgg
     1261 caaatcacgc accatccgcc gcattcagtc tatccactat cttgatcgta aagatcctga
     1321 tgtgcaggcg catatcctct agcgcatttg ttagttagag ccttccagcc tcgcggggct
     1381 ggaaatcttt ctcctgacga acgaagataa ggttagcgat tcagaacagg agaaaaccat
     1441 ggccgattgg gtaacaggta aagtcactaa ggtgcaaaac tggactgacg cactgttcag
     1501 cctgaccgtt cacgccccca ttaatccttt tactgcaggc caatttacca aactcggact
     1561 ggagatcgat ggcgagcgcg ttcagcgcgc gtattcctat gtgaatgcgc ctgacaatcc
     1621 gaatttagag ttttatctgg tgacggttcc gcaaggaaag ctcagcccgc ggctggcggc
     1681 gctaaaacct ggcgatgagg tacaagtggt cagcgacgcg tcgggtttct ttgtactgga
     1741 tgaagtgcct gactgcgaga cgctatggat gctggcgacc ggaaccgcta ttggcccgta
     1801 tttgtctatt ctgcaatatg gccaggatgt cacgcgcttt aaaaatctgg tcttagtcca
     1861 cgccgcacgc ttcgccgccg atttaagcta tctgccgcta atgctggaac tgcaacagcg
     1921 ttatgaaggc aagctgcgca tccaaacggt ggtcagccgg gagagcgtgc caggctcgct
     1981 taccgggcgc gtgcctgcgc tcattgaaaa cggcgagctg gaaaaagccg ttggattacc
     2041 gatggataaa gagaccagcc acgtcatgct gtgcgggaac ccgcagatgg tgcgcgatac
     2101 gcagcaactg ctgaaagaga cccgacagat gactaaacat ctgcgccgcc gaccggggca
     2161 tatgacggct gaacattact ggtgatgttt taccgaatgg cagctagggc ttatccggcc
     2221 tgcaaatcat caccaatctg taggcccggt aagcgtcagc gccaccgggc aaattacggt
     2281 ttaccgcccg tttacggttc tgccttaaac ttcacgtcct gtgtcgcttt cccaaactta
     2341 ttttccccct gaacaccgac aaacgcgccc agatcgataa gcatcatcac caggatcagc
     2401 gtcggaataa atcgcccgac gacccactgc cacatccccg gcaacatcac ccagtttccg
     2461 gccagcagca tccacgccag aatcattagc aacgcccacg cgccggaacg tccccggtca
     2521 tgcagacgtt tgaccatgac ggcggcggtc ggccacagca ggcacaccag gcaaaatgcc
     2581 gccgtttgga tatcaagcag gtttttcccc gccagcgaaa atagcgccag catcccggca
     2641 aaccagaggc cgatccaaat ccagaaatca cggcgtccga tacgcccttt aaatgagaat
     2701 aaccattgct gtatggtcat gtaagttcct tatattttgc cttccgctac agtttaccct
     2761 tttgacaagc ccgacagtta tcgttttaat cgtgagcagt cctaacgaaa ggtaagattg
     2821 atgaagccag gatgtactct gtttttactg ttgttttctg ctctcaccgc cagcataacg
     2881 gcgcacgcgc agctctcttc atcgaccacg acagcgccct atctgctggc gggctcgcca
     2941 acctttgatc tttctattag ccagtttcgt gagaacttta accgccagaa tcccgatctg
     3001 ccgctcaatg aatttcgcgc cattgagaat agccgcgata aggcgaatct gacccgcgcc
     3061 gccagtaaga ttaacgaaaa tctgtatgcc tccacggcgc tggagcgcgg tacgctcaaa
     3121 gtgaaaagta tgcagattac ctggctgccc attcaggggc cggaacagaa agcggcgaaa
     3181 gcgaaagcgc tggaatatat ggccgccatt attcgcactg tcgccccgtt actgacaaaa
     3241 gagcaaagcc agaaaaaact gcaaaagatg cttatcgccg gtaaaggtaa acactattac
     3301 gccgagaccg aaggcgcggt acgttatgtt gtcgcagata acggcgaaaa ggggctgacc
     3361 ttcgcggttg aaccgattaa gctggcgtta tctgaaaatc tggaaggggc gaattgatga
     3421 caaaaagcaa agcctttccg gggatgaatc tctatactgt ttcacagacc atgctgctct
     3481 gacgagcggc catcttcctt aattcgctga ctaagcgtgg agaaatgaaa tgcgacatcc
     3541 tttagtgatg ggtaactgga aactgaacgg cagccgccac atggtaaacg aactggtggc
     3601 taacctgcgt aaagaactga cgggcgtagc aggctgcgac gtggcaatcg ctccgccgga
     3661 aatgtatatc gatctggcga aacgcgctgc tgccggcagc cacatcatgc tgggcgcgca
     3721 gaacgttgat ctgaatctgt ctggcgcatt caccggtgaa acttcggctg aaatgctgaa
     3781 ggatatcggc gcgcagtaca ttattatcgg ccactccgag cgtcgtactt atcacaaaga
     3841 atctgacgag ctgatcgcca aaaaattcgc cgtactgaaa gaacaaggtc tgacgccggt
     3901 actgtgcatc ggtgaaaccg aagcggaaaa cgaagcgggc aaaacagaag aagtgtgcgc
     3961 acgccagatc gacacggtac tgaaaacgca gggcgcggca gcctttgaag gcgcggttat
     4021 cgcttacgaa cccgtatggg cgatcggtac cggtaaatct gcaactcctg cgcaggctca
     4081 ggcagttcac aaattcatcc gtgaccacat tgctaaagct gacgcgaaaa tcgctgaaca
     4141 ggttattatc cagtacggcg gttctgttaa tgcgtccaac gcagccgaac tgttcgcgca
     4201 gccggacatc gacggcgcac tggtaggcgg cgcttctctg aaagctgacg ccttcgccgt
     4261 gatcgtgaaa gcagcagaag ctgctaaaca ggcttaattg ccaatcaatg tctgatggcg
     4321 ctgcgcttat caggcctacc agccgagtgc ttatgtaggc ctgataaggt aaagccgcca
     4381 tccggcattt atgctgtgga gggtaagaaa gtagtatccc cggcaacctt aaacatcgcc
     4441 ctccagctcc gcgtattctc aaccagccga tcatcacgaa ataacgcact accagaaaca
     4501 acacgatcga tgccctgtgc aatcagcgaa ggcaactgat cctgcgttaa cgacccatca
     4561 ataacgataa ttttaccttc gcgtttatca ccaagtagac agagaagctg tgccacgcgc
     4621 tcgtacaaat cactggagcg cattttactg ccgtatccag ggttcactgc cagtagttga
     4681 ataacctcaa cgtcgctcag aatagggata atgacatcca gaggcgttgc cgggcataaa
     4741 ctaatccccc ggatcaccgg catttcaccg tcaataacgg gcacggtctg ctgaccaagc
     4801 cagcttagcg tatgatgcag atgaatatcg ccttcagcct gaagcgtgat gcagtgtgcg
     4861 cccgctttca cgcaggcttg cgccgccgcc cattgatccg ctaccatcaa atgaacatct
     4921 ttgataaaag tttgcggcag ttgcccaact gcccatggcc caacggtaaa ctgtgggcaa
     4981 aattgaccat ccatcaaatc caaatgcaac agcggctggt ttaacgcttc caactgttgc
     5041 agatagcgat gcaacgcaat ccactgccct gccagaatac ccacactaag cggatatgac
     5101 gctaacaatg ccacacatgc ttcgcgcgtt aatccggcaa actggctgtt catgagcgct
     5161 ccttaaggca tcaaacccat aaaaactttt tttgtccgcg gaccggtcat caacggttca
     5221 agctgctcca cgcaagtttt atagtgtggc gttgtcttgt gaaaagcgac ggcctgttca
     5281 tcaacgtagg cttcataaat ataaaatcgc gtaggcacct gcggatcctg cagaacatca
     5341 aaacgcaagt tacccggctc tttaattgag cccagatgat tctgccgaaa aacatcgata
     5401 aattgttcaa ccttgtcatc atgaacgtta atttcaacca gcgtaacgtg catcattaac
     5461 cccctgatta ttccaaataa aataacagtc atccccatct cctcgcatcg gtaaaagatg
     5521 gggaagcgat ctcatttaac ctttctcact caaaaacagc tcataagcac gctctgctgt
     5581 ttcgttatga tgaacgacag catgtaccgc tttaatcatg gctaccggat cttctgactg
     5641 gaatatatta cgccccatat ctacgccaga agccccctgg tcaatcgcct gatagcacat
     5701 ttccaatgct tcacgttcag gcagtttttt accgccggcg atgacaatcg gcaccggaca
     5761 acctgccgca atacgctcaa aacctttatc gacataatac gttttgataa tttgcgcccc
     5821 catttccgca gcgatacgcg ttgccagtga aaaataacgc tggtcgcgag ccatatcttt
     5881 acccaccccg gtcactgcca ttattggcat cccgacgcgt aacccggcat caatcagttg
     5941 aataatattt ttaatcgact gatgttcatg ttcactacca atataaacct gtgcggcagc
     6001 agcacagcta ttcaaccgca cagcgtcatc catcgccacc gcaaccgcct cattgcttaa
     6061 ttcagtgaga atagaatttg ccccggacgc gcgtaaaacg actggtttat tgattgccgg
     6121 aggtaccaca ctgcgtaata tgccgcgagt acacattaag acatcagcat attcaaagag
     6181 cggcgcaata ttgatatcaa tacgctcaag tccggttgtc ggcccctgga aatatccatg
     6241 gtcaaaggcc agcatgaccg ttttcctggt cctgggatta aaaatcctcg ccagtctgga
     6301 ctgcattccc caatccagcg cgccacagcc ttttaatgag aacaaagtgt tagtttgtgg
     6361 tttatcggtg tgaaaatctt tgccatcttt aatatcatct aaatcagcca ttctttactc
     6421 cgtcgataca taacagttat cagaaatcat atttgtcgat attgtctttg ttgaaaatga
     6481 cacgctctgg caataacaca atgccgttac cttttgcctc atagtgatat ccctgctcac
     6541 tattaggtga aacggtgact ttgccgatgc cgggaatatc cagtgaatca ccgacattca
     6601 ttggcatatt tttcagcaac gcgttggcga catatacgga aatttttccc tgttggacga
     6661 catcccacag gccaaactct ttaacagtgc cgcgctgaac ataagggcgc attacattcg
     6721 gcgtactaaa accaacaatc gcgagattat tacgtttaag gttctccgcc gcctgtgccg
     6781 cagcaggtaa agcgttagcg tcaggcgcga tgatggcatc cagatcggga tacgctttga
     6841 tgataccttc cgccgtctgg agcgatttcg tggcatcgtt atagccaaac tgggtagtga
     6901 ctatctccca ccctggatgt tcctggctaa ttttggcttt agcttctttt acccactggt
     6961 tctggtcggt caccgttggg ctggaataga agaaagcgac tttcgctttc tctttgtcca
     7021 cctgatgagc ggccatctct accagcatgc tgccgagctg ttttggcgtc ccttgattga
     7081 tatagtaaga acggcactcc ggcttggtat cggaatccca ggttaatatt ttcacgcctc
     7141 tttgcattgc ccgcttcaac gccgggcaca ggccatcagg cgaaacggca gaaacgataa
     7201 tggcgtcata cccctgattg acaaagttat tcaccagttg aacctggcct gagacgctgg
     7261 gctctgtagg gccatcgtaa gttacgtcaa tgcccagcgc ttttcccgct tcctgcgcgc
     7321 cattgccgcc gctggtaaaa aagcccacgc caaccagttt gggaataaaa gcaatccgct
     7381 ctgccgcctg cacggtcatt accgcagatg ccagaccaaa cgcagtgagt aaggcgatca
     7441 ttttaatgct gtgtcttgcc atttttttct ccataaattt caaaaggaaa tcatgcctga
     7501 tgcgcattgc gacggcgtga gtaccattca aggatttggt gacgatgcaa actgacggaa
     7561 cgaccaacga caacaacaat gagaagcgca ccggacaatg cgctggaaat ttgattcggc
     7621 actccggcca tctgtagccc ctgctgtaaa aatcccacca gcagcgccgc caacgcggac
     7681 cccataatcg acccggagcc gccataaata ttggcgcctc ccagcacaac cgccgtaatg
     7741 gtcggcatca ggaaagaggc gcccagatcc gaacgtgcgg agccaaagta agaaaccagt
     7801 aatacggcgg cgatcgcgga ggcgcatccg gtcatggcat acacggtata caacgtgcga
     7861 ttcaccggga tcgcgctgta ctgcgcgaca cgggcgctct ggccaatcag gaaaacgttg
     7921 cgtcccatat gcgtgcgatg catgagcagc cagaaaaaca gacagcacac aagaaaaaaa
     7981 ataagcggca taggaatacc aagaaatgaa atattggcaa agtcagtgaa cgctgtggga
     8041 aatccaccaa taccttcata acccgtggcg ccagccatac cagataacaa taatgcgcta
     8101 ccaccaaata aatacatggt tcccagggta atcaccaacg ggtttacgcc ggtataaata
     8161 ataagtccgg catttatcag cccacatatt gcgccgagta gtagggtaat aataatcgct
     8221 aaaggtagcg gcataccgag ctgaaacagc acacccaggg taatcgcgca tagcccgatt
     8281 gtagaaccaa atgaaatatc cataccaccg ctgacaataa ccattgttag cggcaaagcg
     8341 acaataccga tacaaataaa atcgctagtg ctaaaaagta agacattaat atctaataaa
     8401 cgtggattaa tcagaccgaa agccagaatt tcaaagatca ataaggctgc cagcgcaatt
     8461 tcccagctat agcgtcgcca tggattcatc atgccacctc tttgttttta ttctgttgtg
     8521 cgtgcgtttt tgcttccgcc tgtagtggag tgggtggtga tataaaacgg gcatatttct
     8581 ggcggcgcag attgcgttgt aatgcgcaac gcagccgccc atcgaatacc agtacgccca
     8641 acaataccag gccagcaata aaatcgttcc accaggcggg gatgcgcagc agcactaaca
     8701 cactatcgat ttgcgtaaga aaataagcgc cgagaatagc gccgatgacc gtgcctgacc
     8761 cgcctaacag gctaattccc tccaatacgc aggccgcgat ggctttcatt tccagccccg
     8821 tgccggtttg attgggaatg aagccaatct gcgaggcaaa cacgattcca gccaatgccg
     8881 ccataccgcc attaagtgaa aatgccatga tgcgtaccat ctcggtacgg acacccaatt
     8941 gccgggcgcc ctgcaggtta tcgccggtgg cgtaaaaatt gcggccaaag gcggttttcg
     9001 ccaggagcca ggccataagc agcgctaaca ccagggtaaa ccagccgatt gcggaaattc
     9061 ccagaaacac cggagcagag agttgcttta agcctgcggg taatccttca atccattttc
     9121 cccctgtcca tagcagcatg atcccacgat acaagcccag cgttcccagc gtggcgacaa
     9181 tggcgggtat cttcaaccag gcaaccagta cgccattaaa aaatccggcg acaattccta
     9241 atattagtgt ggccaggcag gcgaccggca ggctatagcc ggcgtttaac attactccca
     9301 gcaataccgc gcacattcct gtcgtcgagc ccaccgatac atcaatattg cgggtgagca
     9361 ttaccatcgt cgcgccaatc gccaacagca tcaaaatttg cgcgctactg aaaaccattg
     9421 tcagcgtttg cacgctcaaa tactggctat ccagcgcgcc aagaaacacg aataaacaga
     9481 ctattgccag cagtgccgtc gcttcccggt tattttggat gaatttcaac atgttgcctc
     9541 cgacgcacca tgttcgccaa acgcaacgtg catgatggta tcaacgttaa tttcctcgcc
     9601 gcataacgca ggccccccca gttccccctg gtgcatgaca tatacgcgat cggccatctg
     9661 ctctatctct tccagatcgg aggaaataaa cagcaccgcg acattttgtt gcgcgatact
     9721 gcgcaacagc tgataaatat cgctgcgggc ggagacatcg acaccgcggg tcggttcatc
     9781 gacaatcagt aattgcggag aggcctccag gcatttggca atcaatactt tttgctggtt
     9841 accgccggat aaagtacgcg ccgcctgttc ggcattattg agtttgatat ttaacgcgcg
     9901 gtggtaacgt tcaagggtgg cgttatcccg ctggggcttt atccaaaatc ctttttggtt
     9961 gtgggtcagc gaacagacat tccatgccag ggaagcgtca agatacagcc cggatgactg
    10021 ccgatcttcc ggcaaataga ccaggccgag ctgcaaccgc tgttgggttg tcagggcgtt
    10081 aatttcttca ccattgaaca gcatccgccc cgcattgacc ggtctaatac cgtacagcgt
    10141 ttcagccaat tctgtgcgtc ccgcgccgac caacccggcc aaaccaagga tttcgcctgc
    10201 ccgcacctca aggttgatat tcataaaacc ttcgcccgtc agtgactcca gcgctaatac
    10261 cgtcgcgccg cgttcgttct gcgggcggct gccaggcaat tccagccaca acttttgact
    10321 cgcggaaaga ctgacgccct gcgttgccgg ggtgatagct tgaataatct cgtcggtaga
    10381 aaggtcatgc gtttttctga ataatgcgat tttaccgtca cgcatcacgc taacgcagtg
    10441 agctaactgt ctaatttctg gcagcttatg agaaataaat acaattccga cacccttttt
    10501 cagcaactct tgcagacgcg taaataaccg gtcagtttcg gctggcgtta acgacgccgt
    10561 gggctcatca agaattaaga ttcgcgagtc gcgcatcaag ccgcgcataa tttcaacgat
    10621 ctggcggtct gcaacatcaa gcgtacccgc agcgctcgcc ggatcgagtt ggcatcccat
    10681 cgcctttaat agctgctgca ttttttccgt ggaggcctga cgtccctgca agccaaacaa
    10741 gatattttcc cgcacagata aactcggaaa taacagaggc tcctggggaa ccaggtaaat
    10801 gccatactgg tgcgccttca gaggcgttaa atgactgcaa cgcacaccag caatatcgat
    10861 agtccctcca tctggcggga ctataccggc aataatcttc attaatgttg atttacccgc
    10921 accattgccg ccaagcaatg cgtgcacctc tcccgcatgc agagtaaagt caattccctt
    10981 tagtacttcg acgccggaat aacttttata aatgttctgc acacaaatca gaggggatgc
    11041 agtattgtga ctgatttgca tgttgcctcc gctccctcaa tgttgactga cgggactgaa
    11101 caaatgtttt ttgaaaaaga aattgttcaa aacggtagta gttatttggt caaaaaactc
    11161 tcatccagat cacgttttct gaataaatga atttttagat gataaatgtt cagatttggc
    11221 gcgtttttgt ggcgttaatc acggttattt cggagtgata actgaacaat tgtgttaatg
    11281 atttagaaat gttcaaagta aagccaggtt atgacaatga gcgataatac gttggtatct
    11341 gattatggaa tgtgcgaaga agagcaggtg gcgcgtattg cctggttcta ctatcacgat
    11401 ggattgacgc agagtgaaat cagcgagcgt ctggggctaa cccggctaaa ggtttctcgt
    11461 ctgctggaga aagggcatca gtccggtatt attcgcgtac aaatcaactc ccgtttcgaa
    11521 gggtgtcttg agtatgaaaa tgccttgcgt aaccacttcg cattgcagaa tatccgcgtg
    11581 ctgccggcat tacccgatgc cgatattggt ctgcgcttag gaatcggcgc cgcccatatg
    11641 ttgatggagt cactgcggcc acagcaactg ctggccgtcg gctttggcga agccacgatg
    11701 accacattaa aacgcctcag cggatttatc tcggcgcaac aaatccgact ggtcacgtta
    11761 tccggcggcg tggggccgta tatgaccgga ataggccagc ttgatgccgc ttgtagcgta
    11821 agtattatgc ccgcgccgct gcgcgcatca tcgcaggaaa ttgcctgcac gctgcgcaat
    11881 gaaaatagcg tgcgggatgt gatgctcaca gcgcaagctg ccgatgccgc catcgtgggg
    11941 attggggcaa ttaaccagaa agatcaagcc agtatcttaa aatccggcta tatcactcag
    12001 ggtgaacaac tcatgattgg ccgcaaaggc gcagtaggcg atattctggg ctattttttt
    12061 gatgctcatg gcgaaattat tccagacatc aaaatccata acgaattaat tggcctgaag
    12121 ttaaattcac tttccacgat cccaactgtg attggcgtcg ccggcggcga acaaaaagca
    12181 gaagctatta ttgccgctat gcgcggtaac tatatcaatg cgctggttac cgatcagaaa
    12241 accgcaggga aaataattca acttattgaa aaataaaaaa taaaataaca cttacctcaa
    12301 ttcaataaac aataactgac aggattttat gtaacgatgt aaaaatagcc gagggtaaaa
    12361 aaatggctcg actctgtacc catactgaat caggacatta cctgatggct cttgacgccg
    12421 gtaccggtag cgtcagagca gtaatttttg atctacaagg aaagcaaata gctgtcggtc
    12481 aagcggaatg gcagcatctg gccgtgccgg atgtgcctgg ttcgatggag tttgatcttg
    12541 ccaaaaactg gcaactggct tgccagtgta tccgtcaggc actacagaaa gccgccatcc
    12601 ctgcaacggc tatcgctgcc gtatcggcct gttcgatgcg tgaaggcatt gttatttatg
    12661 acagtaacgg cgaacccatt tgggcctgcg ctaatgttga cgcccgcgcg gcgcacgaag
    12721 tcagtgaatt aaaagagctg cacgataaca cctttgagga ggaagtttat cgttgctccg
    12781 ggcaaacgct ggcgctcagc gctattccgc gtctgctctg gcttgcccac catcgtccgg
    12841 atatttatca tcgcgcgtca accgtcacta tgatcagcga ctggatggcc tttatgctca
    12901 gcggcgaact ggcggtcgat ccctccaacg caggcacgac ggggttattg gatctggtga
    12961 cccgcaactg gaaacgtagt ctgttacaga tggcgggcct gcgttctgac attctctcgc
    13021 cggtaaaaga aaccgggaca ctgctcggtc acatttcaca gaaagcggct gaacagtgcg
    13081 acctgcaagc gggtacgccg gtcatcgttg gcggcggcga tgtgcagtta ggctgtctgg
    13141 ggctgggcgt cgtacgcccg gcgcaaacgg ccgtgctggg cggaaccttc tggcaacagg
    13201 tcgtcaatct tcccgcgccg gtcaccgacc caaacatgaa cgttcgcatc aatcctcatg
    13261 tgatccccgg tatggtacaa accgagtcta ttagcttttt tactgggtta acgatgcgtt
    13321 ggttccgcga cgccttttgc gccgaggaaa aactaatcgc tgaaaggtta ggtattgatg
    13381 cgtattccct gctggaagat atggccagcc gggtgcctcc cggcgcgcac ggtgtgatgc
    13441 ccatcttctc tgacgttatg cgttttaaac gctggtacca tgccgcgccg tcgtttatca
    13501 atctgtctat cgatcctgaa aaatgtaata aagcgaccct atttcgcgcg ctggaagaga
    13561 atgccgccat tgtttccgcc tgcaatttac agcaaattgc cgcgttttcc ggcgtacagg
    13621 ccgactcgct ggtttttgcc ggcggaggat ctaaaggcaa attatggagc caaatccttg
    13681 ccgacgttac gggactcacc gttcacgtac ctgtcgtcaa agaagctacc gcgctagggt
    13741 gcgctattgc cgcaggcgtt ggcgtgggta tctggccatc gctggcggaa acgggagaaa
    13801 agctagtgcg ctgggatcgg gagcataaac ctaatcctga aaatttcgct gtctatcagc
    13861 aggccagaga aaaatggcag gccgtttatc aggatcaacg cgcgctggtc gatggtggct
    13921 taacgacatc cctctggaaa gcgccaggcc tgtaacagga gaataagcat gcaaaaaacg
    13981 aatgagaaga atcatgaata ccgctttagt gataatggcc ctaaatactt aatccgtggg
    14041 ccgggctgcg atatgggcgt cgtcatacta caaccagggc agtcattccc taaccatcgc
    14101 cataataccg cttgtgaggt tttttatacc ctaagcggtg aagtgtgcct gtatctggaa
    14161 ggaacacctc atatcctgca aactggagat gttttacagt gcgaaccagg ggaggcacat
    14221 tatctcatta ataacggcga taagccctag aaaggcgtgt ttattaaatc gccgcatctg
    14281 gaaaatgaca gccaccccgc agatccaccg gcctggtaac gcccacgcca tcgccagatt
    14341 ttgccggata gcgccacgag agccttgtcc ggcctccaaa cggcattcgt taatgcaata
    14401 tcaagctgtc atttgatgac ctgttggttc aagatatcac actgatgatc ctgaatttcc
    14461 tcggcagaag cgcgattgaa ggtcagtaaa ttacgctcgg tcgccagcag gacaaaagag
    14521 ccatcgcttt ggcgtaccac cgccagcgcg ctacatcact gcatccccgc ccgcgcagga
    14581 actttccctg gtcccatcgc caccacagca gcaaaaaata gcagtgcggt cataaactcc
    14641 ggcagtagcg aagtcgccca cagaaggata gtaatgccaa cgatgatgga agggaggatc
    14701 agaggatagg acaaccagag cgacatacct gtctcctgac gattttttca gcaagaatac
    14761 gacggacagt caggcaggta aacgccagat atagtggggt tatcgcagga ttaagtggac
    14821 agatcagtga taatgaattt caccaaagta ttcagacagc acgtaatagc ggcaatactc
    14881 aaaagggctg tccttcccgg cctgaaacgt ctgtctggcg acggataaca gcggtttatt
    14941 gggggcgatt tgcaattttt cgcacaggtc agcggaaggt aaaatcgcct caactttttc
    15001 tatcgccgag tcgcttgtga cgtttaataa cgaataaagc gacgtatgct ccagcgcctg
    15061 cggtgtgagt tgcagatcgg gaaagaagct aagatcgaga tagatctttt catggttaaa
    15121 cggacggtta ttcaggcaac gaatacgcga aatatagaga tagtgatgct gtgcgggcag
    15181 gctcaagccg tctgcctgag cgtcgcgcgc gcggcgcggc gcgatttcca gaatacggtt
    15241 ctcaatcgcc acgctggcgt cctggagatc gcgggtaata ccgcgaaacg tgtgcccgta
    15301 gctcacgcct tccggcaccg agcacaccac cgaaccactc ccgcgctgcg acgaaataat
    15361 gcccgcattg attaattcgc tccaggcctg tttaaccaca atcagcgaga cgttgtagga
    15421 tctggcaatc tctttttgcg tcggtagttg gctacccaaa ggcaaagacc cgttctggat
    15481 ctgctgacag atgataaaaa atagttgctt ataaagcgga gtaaagctcg ttttatcaac
    15541 ctgcaagctg cgcacctcac gtcttcgcca gcaggggacg ttttaccgtc cccggcaggg
    15601 tgaagtcgct accctgcgat ttgcctggcc agttctgcca aatcgaaatg attcatacga
    15661 tccaaagtcg ttaaataatc ggcgggaaaa gcctccacgc catggaatgc gccggaaatc
    15721 gccccgacca tggtggcgac agtatcagta tcattgccga tattaacgcc ggagataata
    15781 gcatctacgg cagaattcgg acaacacgcg aacaggccaa aggccgcggg caccgcttca
    15841 ctcacgtgca gcccggagcc aataatatcg gcaatatcca ctatcgccgt ttcccaatgg
    15901 cgatgacgtt taccgatatc tacggccagc tcaatgcgtc gggcaacgga aggacctgcc
    15961 accatcatcg ccccttgctc ctgcgccagc agatagcccc tttgcgcacc gtaaataccg
    16021 gcggcaataa tgctgtctgc attggtctgc gctcttaacg cctcgctggt tgccgccgcc
    16081 atcgccgctg cgccggacat cgccagcacg ttattatgcg taaaacggca aatctgcagc
    16141 gcgcagtcaa tcgccgcgtc aatatcaccc gggtgcagca ccgccgctgg ccaaatcttc
    16201 atggcggcgc cgttcgttgc ctccgcatta cccttattaa tgatctgtac cgactgtttc
    16261 tcgccttcca gctcaccctg taaagaggcg cggttatcat tgaatattgc cttcattgcc
    16321 gcacgcgtcg tcgggccggt aaagttggcg tagtacgggt aatccagcca ctgctggaaa
    16381 gcttcgcgca tcgcttcgtc gctgacttca cgctgatggc gcagcagcgc atccatgatg
    16441 tacttcgcct gaataaaatc atccgtgcac atccccgctt cattgcagcg cccaaacgtg
    16501 tccgcaggcg gtttttgaaa ggtcgtcacc cagccgccaa aatagtcttt tatttgctgc
    16561 tgggtgcgta cttccgtcgc ggctcccatc gcgtccgcgg cggcggcgcc caccaggcat
    16621 cccagtattt tgttttgatc aacgtgcatg atgactcctt atttcacggt catggcttgt
    16681 gccagcgaat ggctggacag aaaagtgttt agctggtcgg gaaacggcag agcggtcatt
    16741 gcgccttttg ccgtcaccgc catagcgccg caggcattgg cattgctgat ggcttccgcc
    16801 agcagggcat gatcccagca atttgcgcgg gaaagggtga acagcaggcc gccgacaaaa
    16861 gcatcgcctg ctccggtggt atcgacgaca tcgacgcgtg gtgcgggaaa atggaactcc
    16921 ccctcggcgg taatcaacag cgcgccatcg gcccccagcg aaatgatcgt ggtgtcacag
    16981 cctagatcgc gcaggtaata acgcgcatcc tgccagtgac tggccccgct gagctggcac
    17041 agctcatctg ccgagacttt gcagatagaa gccaacgcgg cggaccgggc gatcagttca
    17101 gggatttcat cggtattgcg ccacatcttg ctgcgtaagt tgacgtcgaa taacacgtag
    17161 ccaccggctt ctcgcatgcg tctcgcccct tccagacatg cttcgcgagc gggactgtcg
    17221 gtgaggccaa ttgagctgaa gtaaaaccat tcgtgctgcc tgaacggcgg caaatcctgc
    17281 ggcgaaacgt aggtatcagc ccccggatgc accagatagg taaagctgcg ttccccgtca
    17341 gccgtcaggt tgacgatcag caccgcgctg gtcagggccg catccagccg cagcgaagag
    17401 acatccacgc cgttatcctg aaaaacctgg cgcaggaaac gaccggcgtc atcatcacca
    17461 agacaaccga taaaaccgca ctccccgccc agcctggcaa cgcatacccc cacgttcgcc
    17521 gacgctccgc cggggcattt cagatagctg ttctgttttt ccggcaccag atcaacggag
    17581 gcatcgccga taacccaaac cttattcatg gccttcattt gcgcctcctt atgcctgttt
    17641 ctgcgccagg gcgagctgaa tatcacgata atattcatta ttaatcagat actttttcat
    17701 cagcagccca accgcaaggt ggaacagagc cggaatgagc gtcatcatca gcgcaatacc
    17761 ggtgagcgaa cgcgcgctct gttcaacatc ggcctgatag ccaaagtggc tcagcaggaa
    17821 tccgagtatc ccgcccgcga tccccatccc aaacttctgg aagaagagga tgccgccaaa
    17881 cgccaacccg gaaacgcgca gaccggtttt cttttctccg taatccaccg cttcggcgat
    17941 agaggaccag aacaccggca tttacatatc gcagaagaaa ttaataagaa aatagaacgc
    18001 aaacgccagg ataagatttt cacgcccgac agagaaatac atcagcgcgc tcaggataaa
    18061 ggtaataatc tgggtgtagc ggaacatctt aattttgtcc cagaacttgg ttatccaggt
    18121 ggtggcaatc atcgctaaaa tagaggcaac gacgccggta gtcaggaagg gtgaaatcag
    18181 gctatctccg ccgttcagat aatacttggc gtaataagcg gcaacggaac cgcgaataac
    18241 ataaccgcac atcagcagca gaataacaac gccgagaata atccactgat cgttacgtaa
    18301 cagatattta aactgtttcc ccaccgatag cgaggtaatc tccggctcgc tgcgttcacg
    18361 cgtggtgaga aaacagaaga taaacagcag cgcacccatt gcccccatta agcccatcga
    18421 aaactgatag cccaaagcct tattaccctg ccccagccag acggcaagca tcggtacaac
    18481 gatagtcacc agaaaagcgg caatcttggt catcacaaag cgataaccgt tggcgcttaa
    18541 ccgctcaacg gggtcgctgg taatgacgcc aatcatcgaa atataaggaa tggtgatcgc
    18601 ggtatagacc agggtcataa gaatataggt gccataggcc cacgctagct tggccatata
    18661 agccatgtca ggcgtaataa acatcaaata cacggcgaaa ccaaaaggaa tggcaaacca
    18721 cagcagccac gggcggtaac gtccccagcg cgtgttcagt ttatcggtca gaacccccat
    18781 ggccggatcg ataatggcat caatcatccg cacaaccaca aacagtacgc caacatcagc
    18841 ggcgctcagg ccgtagatat cggtatagaa ataggcgagg agcagctgca tggcgataat
    18901 cacaacgttt atcgccatat ctcccgcgcc gaagccgatt ttttccacga tagaaagttt
    18961 catgttgata ttcctttacg cttaacagcg caaatctggt gaacaattaa tgatgtcact
    19021 acatgaaata aaaacgtttt tatatataag ccatccatca gacaatctat ggaggctatg
    19081 aagagagtgt aacgaaccac caaaagatat aaaggtatac ctttatatct tttggttggt
    19141 ttcacatatt tttatagaca cgatcttacc ccagttttaa accgggataa gaatcaataa
    19201 gataatgagc aggggggtgt aacgaaaatc agcgggaaga caaaatggcg caactatggt
    19261 cctgaatctc ttccgccgat gcgcgattaa gcgtcagcag gttacgctcg gtcgccagca
    19321 gaacaaaaga gtcgtcgctt tggcgtacca ccgccagcgc atagcgtccc atatgatcgc
    19381 gcgcttccgg cacctcttcc gccagcatca taaacggact acgctgcgcc agttcgctct
    19441 cggttacccg gcgcgccagg tattcatgcc ccatcagatc gcccggcagc ggaagccagc
    19501 gagtgctgat gcgcgtgaga tcgttatcca gttgttcccg aacgtcagga cggatgcaag
    19561 aaatatggat atgcaaatgg tcctgtgaac gaccaagccg cgaattaatc gccagcgaga
    19621 ccgcgctatc cggaatatca tgcccgtatt ttttactcat atagccgcga gcctgccagg
    19681 ccagccagaa aaagttgggc gtagcgggtt ccagcaatag cgggctttct gtaccgttga
    19741 tacggtaggt gggcatcaat aaatattgca acggaccgtg acgatcttta aagatgacat
    19801 agccggcgcg aggtttgact tccgcgcaag gcgctgggtt ttgatgctgt aactgatcgg
    19861 gcaggcaccg ttcaagcacg atttcccgta atgcatcagg attgccggaa aatttccagt
    19921 aaccgacgcc cgccgcggcg acaatcacta tcaccgccag taaaaagtag cctgtttttt
    19981 tcatgatatg cgttccctgt gacccataga cggggaagag taacgcaaaa ttgtggcaaa
    20041 gaaaaaaccc ggtaacataa tacgttaccg ggtttataaa cggtttagcg tttgctgatt
    20101 tggtcgaacg taccgccatt agcaaagtga tctttttgcg ccttcaccca gccgccaaac
    20161 acctcgtcaa tggtgaatag cttcagcttc ggaaacgcat cgtcgtattt tttcgccacg
    20221 tcagcatcgc gcggacggta gaagtttttc gctgctatct cctgcccttc cggcgaatag
    20281 agatacttga gatacgcctc cgccaccgca ttcgtccctt tcttctcaac gactttatcc
    20341 accacggaca cggtcggctc tgcgaggata gattcactcg gggtcactat ctcgaattta
    20401 tctttaccca gttcgttcgt cgccagcagc gcttcgtttt cccaggcgat cagcacatca
    20461 ccgataccgc gttcaacgaa agtattggtt gagccacgcg caccggagtc cagcacttca
    20521 acgtttttaa acagggcttt gacaaagtcc tgggctttgg cctgatcgtt attgttgtgg
    20581 tgcagggcgt agccccatgc cgccagatag ttccagcgtg cgccgccgga gcttttcggg
    20641 tttggcgtaa tcaccgacac accgggttta atcagatcgt tccagtcatg aatttgtttt
    20701 ggattgcctt tgcggaccag gaaaacaatg gtggaggtgt aaggtgctga gttatccggc
    20761 agacgcttga tccagttttt atcgatacga ccacgttcag caatagcgtc cacatcgtaa
    20821 gccagcgcca gcgtcacgac atcggcttca atgccgttaa tgacggaagt cgcctgttta
    20881 cctgaaccgc cgtgcgactg gcggatcacg acgttgtcgc cggtttcctg cttccagtgc
    20941 gcgctaaacg ctttgttgta ctgctcgtac agctcacgcg ttggatcgta cgatacgtta
    21001 agtaactgaa tatcctttgc cagaatgctg gttgacgcca gcaataatgt gaaccccacg
    21061 ccccactttt tcatcgcccg actcgcttat gttgtgttgt gatgagcaaa gcgtgccaga
    21121 aagagatcca aacattaaag aataaaaaaa gattggctat aacttcgagg aataaatctg
    21181 agggattgcc ggatggcggc tagcgcctaa tccggcctac acgtttctgc aacctgtagg
    21241 cctgataagc gtagcgccat caggcgcgca aaaacaatca gtacagtttt ttcgcgcact
    21301 ccatccagtc gcttttgaac ggacgcttca tgttttcaat cgcatcgatg atgtcatgat
    21361 gaacaagctg ctcgttctgg ataccgacac aacgaccgcc atggccttcc agcagcaggt
    21421 caatagcata cgcgcccata cgggaagcca gaatgcgatc gtaaggtacc ggggaaccac
    21481 cgcgctgaat gtggccgagc accgtcgcac gcgtttcacg gcccgtttct ttttcaataa
    21541 agtgcgccag ttcgtcaaca tcgcacatat gctcagtaat agcgacgata gcgtgttttt
    21601 tccctttcgc gatcccggct ttgatttcgg ccaccagatc ttcgcgatta aattcaactt
    21661 ccggcaccac gataaactca cagccgccag caatagccgc cgccaacgtc aggtcgccgc
    21721 aataacggcc catcacctca acgatagaga tacgctggtg agaagaggag gtgtcacgca
    21781 gacggtcaat cgcttccact acagtgccga gagcagtgaa gtagccgata gtgtagtcgg
    21841 tgcctttgat gtcgttatcg atagtgcctg gcagaccgat gcacgggaag cccatttcag
    21901 tcagacgttt tgcacccata taagaaccgt cgccgccaat aactaccagc gcatcgatac
    21961 cgcgtttttt caggttttcg atcgcgacag cgcgaatatt ttcgtcacgg aattccggga
    22021 aacgggcgga accgaggaaa gtaccgccac ggttgatcat gtcagatacg ctgtaacggt
    22081 caagctgaac catacgatct tcatacaggc ccagatagcc gtcataaatg cccatgactt
    22141 ccagcccttc cgtcaacgct gcgcgcacaa caccgcggat tgccgcgttc atgcccggcg
    22201 catcaccgcc gcttgtcaac acaccgattt tcttaatcat gactacctct gaactttgga
    22261 atgcaaaatg aaatctattg ccggaagccg atttcgcact tcgaaacgat ccaacgaata
    22321 tacagatagt ataacaatcc cttcctgctg aattgattca ggtcaggcca aatggcggta
    22381 atttatacac aaaatgctgg cctggctcac tttttaacaa tcaattatac aagctcgaac
    22441 ttcctgcctt ccctggggac gactgaacag ggatcctgat gaataatgac atctgaaccc
    22501 ggaaaacgcc gcaaaatcgc ctgctctacc tggtcagcca caaaatgcgc ctgaacgagc
    22561 ggcagattat cttccatttc caaatgaatc tgaataaagc gagtcggccc tgactgccgc
    22621 gtgcggagat cgtgcgcgcc gctgactccc ggccatgacg tcacgatatc aataatttcc
    22681 tgtcgttccg catcgggcag cgcgcgatcc aataatgact gcaccgcctc ataccccata
    22741 cgtaacgcgc tatacaaaat atagatgccg atacctaacg caaacagggc atccgcacga
    22801 tgccaaccgt accaggataa ccccagcgcg ataagaatcg ctccgttcat cataacatca
    22861 gactgataat gaagcatatc cgcccgtacc gcctgacttt gggtcttgcg taccacccag
    22921 cgctgaaacg tgaccagtat aatagtgcat atcagagcga tgacggtaac gccaatcccc
    22981 acgccggggt cgttcattgg cgtcggctta atcagattct ggatactggt caaaaacaac
    23041 gccgaaccgg aaataaacat actttgcgcc agcgccgcca gcgactccgc tttaccgtga
    23101 ccaaacgtat gttcatcatc tgcgggttgc agcgaataac gcacgaccaa caaattcgtc
    23161 aatgacgcgg caatatccac cagcgagtcc accaacgccg ccagaatact caccgatccc
    23221 gtataccacc acgcaaaaat tttgatcaaa agtaacgctg atgccatcgc cgttgccgcg
    23281 atagccgccc ggctaaccag ccgtccatag gtttgattca taaatactcc cgctatcttc
    23341 tgccggtagt ataacggatg gtttaaaaca gtaagctaat aacagaatga caaactggag
    23401 ataaaaaaaa cccccacatc atgtggggga agacagggat ggtgtctatg gcaaggaaaa
    23461 cagggttgtt actgggaacg tgagttgcta ctactcaata atttcaacga tgaacttttt
    23521 tgccattgcg ccacgtcgcg cagttgctcc attcgttgct gatgcttttc attcaaaacc
    23581 gcttgctgct ccggcgttaa caggcgatac atctggttac gcacgcgggc catttcgacc
    23641 tggcgggcaa cctgctcttg cgccattttt tctgcctgag cgcgcacaac gctttcatca
    23701 aatttttctg cggtgacaag ccgatgcatt gtctccattt cgctaacatt aacaggaggc
    23761 tgttcgtgcc ttgcctgctg cataagatct cgcatctgct gacgctgatg ttcggttaaa
    23821 cttatgccgt caaacatatg attttgcgcg ctacgctgcg tggccccgtc accggggtgc
    23881 cagttatcgc ttgtaacaac ttcagctgcg tggcttaaaa aactgaatgc cagcgttgag
    23941 gccataacag cagcggtaac tttgcgcatc gcttgctccc aaaatctttt ctgtcgcgat
    24001 tcaacgagag acagtttacg attcgggctg caaacatgcg tcagggggtg taaaacaacg
    24061 taaagtcatg gattagcgac gcctgatgac gtaatttctg cctcggaggt acgtaaacaa
    24121 tgaataaaat cctgttagtt gatgatgacc gagagctgac ttccctgtta aaagagctcc
    24181 tcgaaatgga aggttttaat gtcctggtgg cccacgacgg cgagcaggcg cttgagcttt
    24241 tggatgacag catcgattta cttttgcttg acgtcatgat gccgaagaaa aacggtatcg
    24301 atacgttgaa agcgcttcgc cagacacacc agacgcctgt cattatgctg accgcgcgcg
    24361 gcaacgagct ggatcgcgtt ctcggccttg agctgggcgc ggacgactat ttgcccaaac
    24421 cgtttaacga ccgcgagctg gtagcgcgca tcagggctat tttgcgccgt tcccactgga
    24481 gcgagcagca gcagagcagc gacaacggct cgccgacgct ggaagttgat gcgctaagcc
    24541 ttaatccggg tcgccaggaa gccagtttcg atggccaaac gctggagctg accggtacgg
    24601 aattcaccct gctctattta ctggcgcaac acctcggcca ggtggtttcc cgtgaacatt
    24661 taagtcagga agtgctgggt aagcgcctga cgccgttcga tcgcgccatt gatatgcata
    24721 tttctaacct gcgccgcaaa ctgccggaac gcaaagacgg tcacccgtgg tttaaaacat
    24781 tgcgtggtcg cggctatctg atggtttccg cttcatgata ggaagtttaa ccgcgcgcat
    24841 cttcgccatc ttctggttga cgctggcgct ggtgctaatg ctggtactga tgttgcccaa
    24901 gctcgattca cgccagatga ccgagctgct ggacagcgaa cagcgccagg gattgatgat
    24961 agagcaacat gtagaagctg aacttgcgaa cgatccgccc aacgacctga tgtggtggcg
    25021 tcgcctgttc cgcgcgatcg ataagtgggc gccgcctgga cagcggttat tactggtgac
    25081 ctctgaagga cgcgtgatcg gtgctgaacg cagcgaaatg cagatcattc gtaacttcat
    25141 tggtcaggcg gataacgccg atcatccgca gaagaaaaaa tatggccgcg tagagatggt
    25201 ggggccgttc tccgttcgcg acggagagga taattaccag ctttacctga ttcgaccggc
    25261 cagcagttcg caatccgatt ttattaatct gctgtttgac cgcccgcttc tgttgctcat
    25321 tgtcacgatg ctggtcagtt cgccgctctt gctatggctg gcatggagtc tggcgaaacc
    25381 ggcgcgtaag ttgaaaaacg cggctgatga agtggcgcaa ggcaacctgc gtcagcatcc
    25441 ggagctggag gcgggtccgc aggagttcct cgccgctggc gccagtttta accagatggt
    25501 gacggcgctg gaacggatga tgacctcgca gcagcgtttg ctgtcagaca tctcccatga
    25561 gctgcgaacg ccccttacgc gcctgcaact gggtaccgcg ctgctgcgtc gtcgtggcgg
    25621 cgaaagcaaa gagctggagc gtattgaaac cgaagcgcag cgtctggaca gcatgatcaa
    25681 tgacctgctg gtgatgtcgc gtaaccaaca gaaaaatgcg ctggtcagcg aaacgatgaa
    25741 agccaatcag ctatggggcg aagtgctgga taacgccgcc tttgaagccg aacagatggg
    25801 caagtcgtta acggtaaatt atccgccggg gccgtggccg ctctatggca acccaaacgc
    25861 actggaaagc gcgctggaaa atattgttcg taatgcgctg cgctattcac atacgaagat
    25921 tgaagtcggc ttctcggtgg ataaagacgg tattacgatc acggtcgatg acgacggacc
    25981 gggcgtaagc cctgaagacc gcgagcagat cttccgtccg ttctatcgca ctgatgaggc
    26041 gcgcgaccgc gagt
//
LOCUS       DAGWFR010000047        25891 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.048, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000047 DAGWFR010000000
VERSION     DAGWFR010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 25891)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25891)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25891
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.048"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..321)
                     /locus_tag="MOX77_001971"
     CDS             complement(<1..321)
                     /locus_tag="MOX77_001971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HCA3357511.1"
                     /translation="MSFSRRQFLQASGIALCAGAIPLRANAAGQQQPLPVPPLLESRR
                     GQPLFMTLQRAHWSFTQGTRAPVWGVNGRYLGPTIRVWKGDDVKLIYSNRLAENVSMT
                     VAGLL"
     gene            complement(395..1132)
                     /gene="plsC"
                     /locus_tag="MOX77_001972"
                     /gene_synonym="parF"
     CDS             complement(395..1132)
                     /gene="plsC"
                     /locus_tag="MOX77_001972"
                     /gene_synonym="parF"
                     /EC_number="2.3.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acylglycerol-3-phosphate O-acyltransferase"
                     /protein_id="HCA3357512.1"
                     /translation="MLYIFRLIVTVIYSILVCVFGSIYCLFSPRNPKHVATFGHMFGR
                     LAPLFGLKVECRKPADAENYGNAIYIANHQNNYDMVTAANIVQPPTVTVGKKSLLWIP
                     FFGQLYWLTGNLLIDRNNRAKAHSTIAAVVNHFKKRRISIWMFPEGTRSRGRGLLPFK
                     TGAFHAAIAAGVPIIPVCVSNTSNKVNLNRLNNGLVIVEMLPPVDVSEYGKDQVRELA
                     AHCRALMEQKIAELDKEVAEREATGKV"
     gene            complement(1389..3647)
                     /gene="parC"
                     /locus_tag="MOX77_001973"
     CDS             complement(1389..3647)
                     /gene="parC"
                     /locus_tag="MOX77_001973"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HCA3357513.1"
                     /translation="MSDMAERLALHEFTENAYLNYSMYVIMDRALPFIGDGLKPVQRR
                     IVYAMSELGLNATAKFKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDG
                     QGNWGAPDDPKSFAAMRYTESRLSKYAELLLSELGQGTADWVPNFDGTMQEPKMLPAR
                     LPNILLNGTTGIAVGMATDIPPHNLREVAKAAITLIEQPKTTLDQLLDIVQGPDYPTE
                     AEIIIPRAEIRKIYENGRGSVRMRAVWTKEDGAVVITALPHQVSGAKVLEQIAAQMRN
                     KKLPMVDDLRDESDHENPTRLVIVPRSNRVDMEQVMNHLFATTDLEKSYRINLNMIGL
                     DGRPAVKNLLEILTEWLAFRRDTVRRRLNYRLEKVLKRLHILEGLLVAFLNIDEVIEI
                     IRNEDEPKPALMSRFGISETQAEAILELKLRHLAKLEEMKIRGEQDELEKERDQLQGI
                     LASERKMNTLLKKELQADSDAYGDDRRSPLREREEAKAMSEHDMLPSEPVTIVLSQMG
                     WVRSAKGHDIDAPGLNYKAGDSFKAAVKGKSNQPVVFIDTTGRSYAIDPITLPSARGQ
                     GEPLTGKLTLPPGATVEHMLMEGDDQKLLMASDAGYGFVCTFNDLVARNRAGKTLITL
                     PENAHVMPPLVIKDEHDMLLAITQAGRMLMFPVDSLPQLSKGKGNKIINIPSAEAAKG
                     DDGLAHLYVLPPQSTLTIHVGKRKIKLRPEELQKVVGERGRRGTLMRGLQRIDRIEID
                     SPHRVSHGDSEE"
     gene            complement(3758..4624)
                     /locus_tag="MOX77_001974"
     CDS             complement(3758..4624)
                     /locus_tag="MOX77_001974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HCA3357514.1"
                     /translation="MNDLISAAYSERLRRVCDHIERHLDEPLSLEALSRMAHSSPFHF
                     HRQFTVWSGLPLYRYIQWLRLRRASWRLAFNPQDKVIDIALDAGFQNPESFTRAFKTA
                     FGQSPCRFRQSPDWLAWHQRVPKLALQEQHVMDVKIVEFPPTRVAMLTHLGHPDKVNA
                     SAAKFIAWRRETGQSPIASSQTFGIAWHDPQTTPPAQFRFDICGSVRQPIAENDVGVV
                     NSEIPGGRCAVVRHQGSLDSLPESVWYLFREWLPASGETLRDFPVFFQYLNFVHEVAE
                     HELLTDIYLPLR"
     gene            complement(4696..5088)
                     /locus_tag="MOX77_001975"
     CDS             complement(4696..5088)
                     /locus_tag="MOX77_001975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgiW/YdeI family stress tolerance OB fold
                     protein"
                     /protein_id="HCA3357515.1"
                     /translation="MKKLAAIVAVMALCSTPVLAAQQGGFSGPSATQTQGGGFVGPNG
                     SSTTVESAKSLRDDAWVTLRGNIVERISDDLYVFKDATGTINVDIDHKRWNGLTVTPQ
                     DTVEIQGEVDKDWNSVEIDVKQIRKVNP"
     gene            5240..5899
                     /gene="qseB"
                     /locus_tag="MOX77_001976"
     CDS             5240..5899
                     /gene="qseB"
                     /locus_tag="MOX77_001976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator QseB"
                     /protein_id="HCA3357516.1"
                     /translation="MRILLVEDDTLIGDGIKAGLSKMGFSVDWFTEGRPGKEALYSAP
                     YDAVILDLTLPGMDGRDILREWREKGKQEPVLILTARDALAERVEGLRLGADDYLCKP
                     FALIEVAARLEALVRRASGQASSELRHGQVTLNPGNLVATLAGEPLALKPKEFALLEL
                     LLRNKGRVLPRKLIEEKLYNWDDDVSSNAVEVHVHHLRRKLGSEFIRTVHGIGYTLGD
                     A"
     gene            5896..7245
                     /gene="qseC"
                     /locus_tag="MOX77_001977"
     CDS             5896..7245
                     /gene="qseC"
                     /locus_tag="MOX77_001977"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     QseC"
                     /protein_id="HCA3357517.1"
                     /translation="MKLTQRLSLRVRLTLIFLILVSITWAISSFVAWRKTTDNVDELF
                     DTQLMLFARRLSTLDLNELNAPQRMAHTPKKLKHGHIDDDALAFAIFSADGKMLLHDG
                     DNGQDIPYRYRREGFDNGYLKDDNDLWRFLWLNSADGKYRIVVGQEWDYREDMALAIV
                     AAQLTPWLIALPFMLLILLLLLHRELRPLKKLAQALRFRSPESETPLDAKGVPSEVRP
                     LVEALNQLFSRIHSMMVRERRFTSDAAHELRSPLAALKVQTEVAQLSGDDPLSRDKAL
                     TQLHAGIDRATRLVDQLLTLSRLDSLNNLQDVAEISLEELLQSAVMDIYHPAQQANID
                     VRLQLNAHDVIRTGQPLLLSLLVRNLLDNAIRYSPQGSVVDVTLHARSFTVRDNGPGV
                     APEILTHIGERFYRPPGQSVTGSGLGLSIVRRIATLHGMTVSFGNAAEGGFEAVVRW"
     gene            7352..7932
                     /locus_tag="MOX77_001978"
                     /pseudo
     CDS             7352..7932
                     /locus_tag="MOX77_001978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462094.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
     gene            7964..8278
                     /locus_tag="MOX77_001979"
     CDS             7964..8278
                     /locus_tag="MOX77_001979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HCA3357518.1"
                     /translation="MLTVIAEIRTRPGQHHRQAVLDQFAKIIPTVLKEEGCHGYAPMV
                     DHAAGVSFQTLAPDSIVMIEQWESVAHLEAHLQTPHMKAYSDAVKDDVLEMNIRILES
                     GV"
     gene            complement(8403..10295)
                     /gene="parE"
                     /locus_tag="MOX77_001980"
     CDS             complement(8403..10295)
                     /gene="parE"
                     /locus_tag="MOX77_001980"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HCA3357519.1"
                     /translation="MTQTYNADAIEVLTGLEPVRRRPGMYTDTTRPNHLGQEVIDNSV
                     DEALAGHAKRVDVILHADQSLEVIDDGRGMPVDIHPEEGVPAVELILCRLHAGGKFSN
                     KNYQFSGGLHGVGISVVNALSKRVEVTVRRDGQVYNIAFENGEKVQDLQVVGTCGKRN
                     TGTSVHFWPDESFFDSPRFSVSRLMHVLKAKAVLCPGVEITFKDEVNNSEQRWCYQDG
                     LNDYLGEAVNGLPTLPEKPFIGNFNGETEAVDWALLWLPEGGELLTESYVNLIPTMQG
                     GTHVNGLRQGLLDAMREFCEYRNILPRGVKLSAEDIWDRCAYVLSVKMQDPQFAGQTK
                     ERLSSRQCAAFVSGVVKDAFSLWLNQNVQAAEQLAEMAIASAQRRLRAAKKVVRKKLT
                     SGPALPGKLADCTAQDLNRTELFLVEGDSAGGSAKQARDREYQAIMPLKGKILNTWEV
                     SSDEVLASQEVHDISVAIGIDPDSDDLSQLRYGKICILADADSDGLHIATLLCALFVR
                     HFRALVKNGHVYVALPPLYRIDLGKEVYYALTEEEKAGVLEQLKRKKGKPNVQRFKGL
                     GEMNPMQLRETTLDPNTRRLVQLTISDEDDQRTNAMMDMLLAKKRSEDRRNWLQEKGD
                     LADLDV"
     gene            complement(10323..10904)
                     /gene="yqiA"
                     /locus_tag="MOX77_001981"
     CDS             complement(10323..10904)
                     /gene="yqiA"
                     /locus_tag="MOX77_001981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase YqiA"
                     /protein_id="HCA3357520.1"
                     /translation="MSTLLYLHGFNSSPRSAKACQLKNWLAERHPHVEMIVPQLPPYP
                     ADAAELLESLVLEHGGAPLGLVGSSLGGYYATWLSQCFMLPAVVVNPAVRPFELLTDY
                     LGQNENPYTGQQYVLESRHIYDLKVMQIDPLEAPDLIWLLQQTGDEVLDYRQAVAYYA
                     SCRQTVTEGGNHAFTGFEDYFNQIVDFLGLHSC"
     gene            complement(10904..11731)
                     /gene="cpdA"
                     /locus_tag="MOX77_001982"
     CDS             complement(10904..11731)
                     /gene="cpdA"
                     /locus_tag="MOX77_001982"
                     /EC_number="3.1.4.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3',5'-cyclic-AMP phosphodiesterase"
                     /protein_id="HCA3357521.1"
                     /translation="MESLLTLPLAGEARVRILQITDTHLFAEKHETLLGVNTWESYQA
                     VLEAIRAQQYEYDLIVATGDLAQDQSAAAYQHFAEGIASFRAPCVWLPGNHDFQPAMY
                     SALQEAGISPAKRVLIGEQWQILLLDSQVFGVPHGELSEFQLEWLERKLADAPERQTL
                     LLLHHHPLPAGCSWLDQHSLRNAGELDSVLANFPRVKYLLCGHIHQELDLDWNGRRLL
                     ASPSTCVQFKPHCANFTLDTIAPGWRTLELQANGVLETEVHRLQDTRFRPDTASEGY"
     gene            complement(11756..12178)
                     /locus_tag="MOX77_001983"
     CDS             complement(11756..12178)
                     /locus_tag="MOX77_001983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1249 family protein"
                     /protein_id="HCA3357522.1"
                     /translation="MKRYTPDFPEMMRLCETNFSQLRRLLPRNDAPGETVSYQVGNVQ
                     YRLTIVELTRYTTLVTIEQTAPAITYWSLPSLTVRLYHDAMVAEVCSSQQIFRFKARY
                     DYPNKKLHQRDEKHQINQFLADWLRFCLAHGAMAIPVY"
     gene            complement(12175..12807)
                     /gene="nudF"
                     /locus_tag="MOX77_001984"
     CDS             complement(12175..12807)
                     /gene="nudF"
                     /locus_tag="MOX77_001984"
                     /EC_number="3.6.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-ribose diphosphatase"
                     /protein_id="HCA3357523.1"
                     /translation="MRKSDNLPVTFTKSDVEIIARETRYRGFFSLDVYRFRHRLFNGE
                     MSGEVKREIFERGHAAVLLPFDPERDEVVLVEQIRIAAYDTSVTPWLLEMVAGMIEEG
                     ETIEAVARREAMEEAGLTVGRTRPVISYLASPGGTSERSSILVGEVDATTAVGIHGLA
                     DENEDIRVHVVSREQAYQWVEEGKIDNAAAVIALQWLQLHHQELKNEWKK"
     gene            13008..14483
                     /gene="tolC"
                     /locus_tag="MOX77_001985"
     CDS             13008..14483
                     /gene="tolC"
                     /locus_tag="MOX77_001985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462101.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane channel protein TolC"
                     /protein_id="HCA3357524.1"
                     /translation="MQMKKLLPILIGLSLSGFSTLSQAENLMQVYQQARLSNPELRKS
                     AADRDAAFEKINEARSPLLPQLGLGADYTYSNGYRDANGINSNETSASLQLTQTLFDM
                     SKWRGLTLQEKAAGIQDVTYQTDQQTLILNTANAYFKVLNAIDVLSYTQAQKEAIYRQ
                     LDQTTQRFNVGLVAITDVQNARAQYDTVLANEVTARNNLDNAVEELRQVTGNYYPELA
                     SLNVEHFKTDKPKAVNALLKEAENRNLSLLQARLSQDLAREQIRQAQDGHLPTLNLTA
                     STGISDTSYSGSKTNSAQYDDSNMGQNKIGLNFSLPLYQGGMVNSQVKQAQYNFVGAS
                     EQLESAHRSVVQTVRSSFNNINASISSINAYKQAVVSAQSSLDAMEAGYSVGTRTIVD
                     VLDATTTLYDAKQQLANARYTYLINQLNIKYALGTLNEQDLLALNSTLGKPIPTSPES
                     VAPETPEQDAAADGYNAHSAAPAVQPTAARANSNNGNPFRH"
     gene            14696..15367
                     /locus_tag="MOX77_001986"
     CDS             14696..15367
                     /locus_tag="MOX77_001986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1190 family protein"
                     /protein_id="HCA3357525.1"
                     /translation="MKRTKSIHHASFRKSWSARHLTPVALAVTAVFMLAGCEKSDETV
                     SLYQNADDCSAANPGKSAECTTAYNNALKEAERTAPKYATREDCVAEFGEGQCQQAPA
                     QAGMAPENQAQAQQSSGSFWMPLMAGYMMGRLMGGGAGFAQQPLFSSKNPASPAYGKY
                     TDAAGKNYGAAQPGRTMTVPKTAMAPKPATTTTVTRGGFGESVAKQSTMQRSAAGTST
                     RSMGG"
     gene            15373..16536
                     /locus_tag="MOX77_001987"
     CDS             15373..16536
                     /locus_tag="MOX77_001987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathionylspermidine synthase family protein"
                     /protein_id="HCA3357526.1"
                     /translation="MERVSITERPDWRDKATEYGFNFHTMYGEPYWCEDAYYKLTLAQ
                     VEKLEDVTAELHQMCLKVVERVIASDELMTKFRIPKHTWGFVRQSWQTQQPSLYSRLD
                     LAWDGIGEPKLLENNADTPTSLYEAAFFQWIWLEDQINAGNLPEGSDQFNSLQEKLIE
                     RFAELREQYGFQLLHLTCCRDTVEDRGTIQYLQDCAAEAEIATEFLYIDDIGLGEKGQ
                     FTDLQDQVIANLFKLYPWEFMLREMFSTKLEDAGVRWLEPAWKSIISNKALLPLLWEM
                     FPDHPNLLPAYFAEDEHPPMDKYVVKPIFSREGANVSIIENGKTIESVEGPYGEEGMI
                     VQQFYPLPKFGDSYTLIGSWLINDQPAGIGIREDRALITQDLSRFYPHIFVEG"
     gene            complement(16598..17386)
                     /gene="ygiD"
                     /locus_tag="MOX77_001988"
     CDS             complement(16598..17386)
                     /gene="ygiD"
                     /locus_tag="MOX77_001988"
                     /EC_number="1.13.11.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001356237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4,5-DOPA dioxygenase extradiol"
                     /protein_id="HCA3357527.1"
                     /translation="MSLTCMPALFLGHGSPMNVLDDNDYTRAWRRLGEALPRPQAIVV
                     VSAHWYTRGTGVTAMERPQTLHDFGGFPQALYDMHYPAPGSPALAQRLVELLAPVPVA
                     LDKEAWGFDHGSWGVLIKMYPNADIPMVQLSVDSTKPAAWHFEMGRKLATLRDEGVML
                     VASGNVVHNLRTVRWHGDNIPYPWAASFNDFVKANLTWQGPVEQHPLVNYLQHEGGAL
                     SNPTPEHFLPLLYVLGAWDGKEPITIPVDGIEMGSISMLSVQVG"
     gene            17527..18300
                     /gene="zupT"
                     /locus_tag="MOX77_001989"
     CDS             17527..18300
                     /gene="zupT"
                     /locus_tag="MOX77_001989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc transporter ZupT"
                     /protein_id="HCA3357528.1"
                     /translation="MSVPLILTLLAGAATFIGAFLGVLGQKPSNRVLAFSLGFAAGIM
                     LLISLMEMLPAALDTEGMSPVLGYGMFIIGLLGYFGLDRLLPHAHPQDLVQKRQQPLP
                     GSIKRTAILLTLGISLHNFPEGIATFVTASSNLELGFGIALAVALHNIPEGLAVAGPV
                     YAATGSKRTAIFWAGISGMAEILGGVLAWLILGSLVSPIVMAAIMAAVAGIMVALSVD
                     ELMPLAKEIDPNNNPSYGVLCGMSIMGLSLVILQTIGIG"
     gene            18943..20739
                     /locus_tag="MOX77_001990"
     CDS             18943..20739
                     /locus_tag="MOX77_001990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016159766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aryl-sulfate sulfotransferase"
                     /protein_id="HCA3357529.1"
                     /translation="MFDQYRKTILAGAVALTCGLTAASTFAAGFQPAQPAGKLGAVVV
                     DPYGNAPLTALVELDSHIISDVKVTVHGKGEKGVPVTYTVGKESLETYDGIPIFGLYQ
                     KFANNVTVEYKENGKAMKDDYVVQTSAIVNHYMDNRSISDLQQTKVIKVAPGFEDRLY
                     LVNTHTFTPQGAEFHWHGEKDKNAGILDAGPAGGALPFDIAPYTFVVDTQGEYRWWLD
                     QDTFYNGHDMNINKRGYLMGIRETPRGTFTAVQGQHWYEFDMMGQILADHKLPRGFLD
                     ASHESIETVNGTVLLRVGKRDYRKEDGIHVHTIRDQIIEVDKSGRVVDVWDLTKILDP
                     MRDALLGALDAGAVCVNVDLAHAGQQAKLEPDTPYGDALGVGAGRNWAHVNSIAYDAK
                     DDSIILSSRHQGIVKIGRDKQVKWILAPSKGWNKQLASKLLKPVDDHGKPLTCDENGK
                     CKDTDFDFTYTQHTAWLSSKGTLTVFDNGDGRGLEQPALPTMKYSRFVEYKIDEKKGT
                     VQQVWEYGKERGYDFYSPITSVVEYQKDRDTMFGFGGSINLFDVGKPTVGKLNEIDYK
                     TKEVKVEIDVLSDKPNQTHYRALLVHPTQMFK"
     gene            20759..21430
                     /locus_tag="MOX77_001991"
     CDS             20759..21430
                     /locus_tag="MOX77_001991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HCA3357530.1"
                     /translation="MSSKWITSLFKSVVLTAALVTPFAASAFTEGTDYMVLEKPIPNA
                     DKTLIKVFSYACPFCYKYDKAVTGPVSDKVADLVTFTPFHLETKGEYGKQASEVFAVL
                     IAKDKAAGISLFDAKSQFKKAKFAWYTAYHDKKERWSDGKDPAAFIKTGLDAAGMSQA
                     DFEAALKDPAVQETLEKWKAAYDVAKIQGVPAYVVNGKYLIYTKNIKSIDSMAELVRE
                     LATKK"
     gene            21445..22122
                     /gene="dsbI"
                     /locus_tag="MOX77_001992"
     CDS             21445..22122
                     /gene="dsbI"
                     /locus_tag="MOX77_001992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide oxidoreductase DsbI"
                     /protein_id="HCA3357531.1"
                     /translation="MDFIKGLWRDLRARPVDTLVRWQEQRFLWLLMAIAMGGLIILAH
                     SFFQIYLYMAPCEQCVYIRYAMFVMVIGGVIAAINPKNIVLKLIGCIAAFYGSIMGIK
                     FSIKLNGIHHAVHNADPDSLFGVQGCSTDPTFPFNLPLAEWAPEWFKPTGDCGYDAPI
                     VPDGVTLSSVQQWFVDLYQQSEGWYLLPPWHFMNMAQACMLAFGLCLILLLVMSGAWA
                     LKLARGK"
     gene            complement(22293..22946)
                     /gene="ribB"
                     /locus_tag="MOX77_001993"
     CDS             complement(22293..22946)
                     /gene="ribB"
                     /locus_tag="MOX77_001993"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxy-2-butanone-4-phosphate synthase"
                     /protein_id="HCA3357532.1"
                     /translation="MNQTLLSSFGTPFERVELALDALREGRGVMVLDDEDRENEGDMI
                     FPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVENNTSAYGTGFTVTIEAA
                     EGVTTGVSAADRVTTVRAAIKDGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDL
                     MTLAGFKPAGVLCELTNDDGTMARAPECIAFAGQHNMAVVTIEDLVAYRQAHERKAS"
     regulatory      complement(23052..23250)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00050"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="FMN riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="flavin mononucleotide"
                     /db_xref="RFAM:RF00050"
     gene            23383..23679
                     /gene="ubiK"
                     /locus_tag="MOX77_001994"
     CDS             23383..23679
                     /gene="ubiK"
                     /locus_tag="MOX77_001994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000566826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis accessory factor UbiK"
                     /protein_id="HCA3357533.1"
                     /translation="MIDPKKIEQIARQVHESMPKGIREFGEDIEKKIRQTLQSQLTRL
                     DLVSREEFDVQTQVLLRTREKLALLEQRLSELEARDKPEEVKPAPAIPPVDPQE"
     gene            complement(23754..23963)
                     /gene="glgS"
                     /locus_tag="MOX77_001995"
     CDS             complement(23754..23963)
                     /gene="glgS"
                     /locus_tag="MOX77_001995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell surface composition regulator GlgS"
                     /protein_id="HCA3357534.1"
                     /translation="MLMNNNNVYSLNNFDFLARSFARMQAEGRPVDIQAVTGNMDEEH
                     RDWFCKRYALYCQQATQAKKLELEH"
     gene            24221..24841
                     /locus_tag="MOX77_001996"
     CDS             24221..24841
                     /locus_tag="MOX77_001996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1449 family protein"
                     /protein_id="HCA3357535.1"
                     /translation="MTLFAEYNSPYLFAIAFVFFIGVLEMISLIFGHFLSGALDAHLD
                     HYDALSSGPAGQALHYLNIGRVPALVVLCLLAGYFGLFGILIQHGGIMLWQAPLSNLL
                     LVPLSIVLSVFAVHYSEKILAPWLPRDESSALREEEFIGGMAIITGHAAVAGTPCEGK
                     FTDKFGQIHYLLLEPEKGKEFKKGDKVLIVCRLSATRYLAERTFYV"
     gene            24860..>25891
                     /locus_tag="MOX77_001997"
     CDS             24860..>25891
                     /locus_tag="MOX77_001997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flotillin family protein"
                     /protein_id="HCA3357536.1"
                     /translation="MDDVFGILPSWMFTAIVAVIVLLIIGIIFARLYRRASAEQAFVR
                     TGLGGQKVVMSGGAIVMPIFHEIIPINMNTLKLEVSRATVDSLITKDRMRVDVVVAFF
                     VRVKPSVEGIATSAQTLGQRTLSPEDLRMLVEDKFVDALRATAAQMTMHELQDTRENF
                     VQGVQNTVAEDLSKNGLELESVSLTNFNQTSKEHFNPNNAFDAEGLTKLTQETERRRR
                     ERNEVEQDVEVAVREKNRDALERKLEIEQQEAFMTLEQEQQVKTRTAEQNAKIAAFEA
                     ERHREAEQTRILAERQIQETEIEREQAVRSRKVEAEREVRIKEIEQQQVTEIANQTKS
                     IAIAAKSEQQ"
BASE COUNT         6273 a         6987 c         6591 g         6040 t
ORIGIN      
        1 cagtaaacca gcaaccgtca tggagacatt ttccgccagg cggttgctat agatgagttt
       61 aacgtcatcg cctttccaga cgcggattgt cggccccaga taacgaccgt tcactcccca
      121 gaccggcgcg cgcgtgcctt gcgtaaagga ccagtgcgct cgctgtagcg tcataaacaa
      181 cggctgcccg cgacgggact ccagcaacgg cggaacaggc aacggctgtt gctgaccggc
      241 agcattcgcc ctgaggggaa tcgcgcctgc acatagtgcg attcccgatg cctgaagaaa
      301 ctgacgccga ctgaatgaca tataagctcc atgtaaaaca ggctaaagag ttgtgcctga
      361 aaaaatgatt tctacaataa cagagtaagg ctgcttaaac cttaccggtc gcttcacgtt
      421 ccgcaacctc tttatcaagt tccgcgattt tttgctccat taacgcacgg cagtgggccg
      481 ccagctcacg aacctgatct ttaccatatt cgctgacgtc gactggcggc agcatttcca
      541 caataaccag tccgttgttc aggcggttta gattgacttt gttagaggtg ttggaaacgc
      601 agacaggaat gatcggcaca ccagccgcga tagccgcatg aaacgcgccg gttttaaacg
      661 gcagcagacc gcgtccccgg ctacgcgtac cttcagggaa catccagata gaaatacggc
      721 gctttttaaa atggttaact actgccgcaa tggtgctatg cgctttggcg cggttattac
      781 ggtcaatcaa cagattaccg gtcagccagt acagttgccc aaaaaacggg atccaaagca
      841 ggcttttttt ccccaccgtc accgttggcg gctgcacaat attcgccgcc gtgaccatat
      901 cataattatt ctgatggtta gcaatataga tagcattgcc atagttttcc gcatcggcgg
      961 gtttgcggca ctccactttc aggccaaaca gcggggccag acgaccgaac atatgtccaa
     1021 acgtcgccac gtgttttggg ttacgtgggc tgaaaaggca gtaaatagaa ccgaaaacac
     1081 agaccagaat ggagtaaata acggtaacaa taagacgaaa aatatatagc ataacaacct
     1141 ctgaaggcct aagagcccgg cattctacgt cacctgaaat tcaggttagg attttggtaa
     1201 gtgtggctct ctggaaaaac gtattgttaa tcgcaatgca cgaataaaca acggttttac
     1261 gggaaatttt aatgttaatc cgatctgaaa ccgtaggccg gataagacgc tactgcgtcg
     1321 tcatccggca acggcagagc gccggatggc ggcttagatg ccttgtccgg cctacgggcg
     1381 cccctgtctt actcttcgct gtcgccatga cttacgcgat gcggcgaatc aatctcaatg
     1441 cgatcgatac gctgcaggcc gcgcattaat gtgccacggc gtccgcgttc accgaccacc
     1501 ttttgtaact cttcagggcg cagtttgatt ttgcgcttcc cgacatggat agtcagagtg
     1561 ctttgtggcg gcagcacgta caggtgcgcc agtccatcat cgcctttcgc cgcttccgca
     1621 gaggggatat taatgatctt attgcctttg cctttcgaca gctgcggcag agagtctacc
     1681 gggaacatca acatccgtcc ggcctgggta atcgccagca gcatatcgtg ctcgtcttta
     1741 atcaccagcg gcggcatgac gtgcgcattt tccggcagtg taatcaacgt cttaccggca
     1801 cggttacggg caaccagatc gttaaacgta caaacgaagc cgtagcccgc atccgacgcc
     1861 atcagcagtt tctggtcatc gccttccatc agcatatgct ctacggtcgc ccccggcggc
     1921 agcgtgagtt tgccggtcag cggctcgccc tgcccacgcg ccgagggaag cgtaatggga
     1981 tcaatagcat agctgcgccc ggtggtatca ataaacacca ccggttgatt gctcttacct
     2041 ttcaccgcgg ctttaaagct gtcgcccgct ttatagttaa gccccggcgc atcaatatca
     2101 tgacctttgg cgctgcgcac ccagcccatc tgcgacagca cgatagtcac cggttcggac
     2161 ggcagcatat cgtgttcgct catcgcttta gcttcttcgc gctcacgcag cggagaacgg
     2221 cgatcgtcgc cataggcatc ggaatctgcc tgtagctctt ttttcagcaa ggtattcatt
     2281 ttgcgttcgg acgcgagaat gccctgcaac tggtcacgct ctttttccag ctcgtcctgc
     2341 tcaccgcgaa ttttcatctc ttccagtttg gcgagatgac gcagtttcag ttcgagaatc
     2401 gcttccgcct gggtttcgct gatgccgaaa cgcgacatca gcgcgggttt cggctcatcc
     2461 tcgttacgga taatctcgat cacttcatcg atgttgagaa acgccaccag caaaccttcg
     2521 aggatatgca ggcgcttaag cactttctcc agacgatagt tcagacgacg gcgcaccgtg
     2581 tcgcggcgga acgccagcca ctcggtgagg atctccagca ggtttttcac cgccggacga
     2641 ccatccagac cgatcatgtt caggttaata cggtagcttt tttccagatc ggtggtggcg
     2701 aacagatggt tcatcacctg ttccatatcc acacggttgg agcgtggcac aatcactaaa
     2761 cgcgtcgggt tttcgtgatc cgattcatcg cgcaggtcgt ccaccatcgg cagtttttta
     2821 ttgcgcatct gcgcagcaat ctgctccagc acttttgcgc cagatacctg atgcggcaac
     2881 gcggtgatca ccacggcgcc gtcttctttg gtccataccg cgcgcatacg cacggagcca
     2941 cgcccatttt cgtaaatttt acgaatttcc gcacgaggga taatgatctc cgcttcggtc
     3001 gggtaatccg gcccctggac gatatccagc aactgatcca gcgtcgtttt cggctgctca
     3061 atcagcgtaa tcgccgcttt cgcgacttcg cgcaggttat gcggcggaat atctgttgcc
     3121 atgcccaccg caataccggt ggtgccgttc agcaggatgt tcggcagacg cgccggtaac
     3181 attttcggtt cctgcatggt gccgtcgaag tttggcaccc agtccgcagt cccctgaccg
     3241 agttcgctta acagcagctc ggcgtatttg gacaggcggg attcggtata acgcatcgcc
     3301 gcgaatgact tcggatcatc cggcgcgccc caattcccct ggccatcgac cagcgggtaa
     3361 cggtaagaga acggctgcgc catcagcacc atggcttcat agcaggcgct gtcgccatgc
     3421 gggtgatact tacccagtac gtcgccaacg gtacgggcgg attttttaaa tttagcggtg
     3481 gcgttcagcc ccagctctga catcgcatag acgatgcggc gctgtaccgg cttcaggccg
     3541 tcgccaataa acggcaacgc acgatccatg atcacgtaca tggagtagtt taagtaggcg
     3601 ttttccgtaa attcatgtag cgcaaggcgc tctgccatat cgctcattaa caggggatcc
     3661 tcaatctgca tgctgaccgt tcggacggca atattgccgc agataatacc ctatctcacg
     3721 gtctgagtca caaaccgtga gacaggttgc gaggaagtta acgaagcggc agatagatat
     3781 ccgtcagcag ctcatgttcc gccacctcat ggacgaaatt caggtactgg aagaagaccg
     3841 gaaaatcgcg cagcgtctcg ccgctggccg gtagccattc gcggaataaa taccacacgc
     3901 tctccgggag gctgtcgagc gatccctgat ggcgcaccac cgcgcagcgc ccgccaggaa
     3961 tctcgctatt caccacgcca acgtcatttt cggctatcgg ctggcggacg ctgccgcaga
     4021 tatcaaagcg gaattgagcc ggcggcgtcg tctgcgggtc gtgccaggca ataccaaaag
     4081 tttgactgct ggcaatcggc gactggcccg tttcgcgtcg ccatgcaata aatttcgccg
     4141 cgctggcgtt gaccttatcc ggatgcccca gatgcgtcag catcgcgacg cgggtaggag
     4201 gaaattcaac gatttttacg tccatgacat gctgctcctg taacgcaagt ttaggaacgc
     4261 gttggtgcca ggccagccag tccggcgatt gccgaaaccg gcacgggctt tgaccaaacg
     4321 cggttttgaa agcacgtgtg aacgactccg gattctgaaa tccggcatcc agcgcgatat
     4381 cgataacttt atcttgcgga ttaaacgcca gccgccatga cgcccggcgc aaacgcagcc
     4441 actggatata gcgatagagc ggaagcccgc tccagacggt aaactgccgg tgaaaatgaa
     4501 acggcgagct gtgcgccatc cggcttaacg cctcaagcga cagaggctca tccagatgac
     4561 gctcaatgtg gtcgcaaacg cgccgcagac gttcggaata agccgcgctg atcaggtcat
     4621 tcatcactgc ctccttgtgg cctattctgc ccaccgggcg gctgtgaatc ctgaccgatc
     4681 ttgcgcaatg tgggattacg gattcacttt acgaatctgt ttcacgtcga tttcgacaga
     4741 gttccagtct ttatccactt caccctgaat ttcaacggta tcctgcgggg ttacggtcag
     4801 gccgttccag cgcttgtggt caatgtccac attgatagta ccggtcgcat ctttaaacac
     4861 atacaggtcg tcggaaatgc gctcgacgat attcccgcgc agcgttaccc acgcatcgtc
     4921 acgcagcgat ttagcgctct ctaccgtcgt gctgctgccg ttcgggccga caaatccgcc
     4981 gccctgcgtt tgcgtcgccg acgggccgga gaaaccgccc tgctgagccg ccagaaccgg
     5041 ggtagaacac agtgccataa cggcaacgat tgcagctaat tttttcatga ttacttttcc
     5101 ctttcatgtc gtttcagatc catttaataa ggtaatcctt aacaacttct taaggcaaaa
     5161 aaagattctt tttttctgta catcgcctgc ggcgacaagg ttaactgacg gcaacgcgag
     5221 ttaccgcagg gaagaacaga tgcgaatttt actggtagaa gatgacacac ttattggcga
     5281 tggcataaaa gcaggtctga gtaaaatggg tttcagcgtc gactggttta ccgagggacg
     5341 tccgggcaaa gaggcgcttt acagcgcgcc ttatgatgcg gtcattttag atttaacgct
     5401 gccaggaatg gacggacggg atattttgcg cgaatggcgc gaaaagggta aacaggaacc
     5461 agtactgatc ctgacggcgc gcgacgcgtt agcagagcgc gtcgaggggc tacgtctggg
     5521 cgccgatgac tatttatgta aacctttcgc gctcattgag gtcgccgccc gtctggaggc
     5581 gctggtacgc cgcgccagcg gtcaggccag tagcgaattg cgccacggcc aggtgacgct
     5641 caatccaggc aatctcgtcg cgacgcttgc cggcgaaccg ctggccctaa aaccaaaaga
     5701 gttcgcgttg ctggaactct tactgcgcaa caaaggtcgc gtgctaccgc gcaagcttat
     5761 tgaagagaag ctgtataact gggatgacga cgtgtccagc aatgcagtgg aagtccatgt
     5821 tcatcattta cgccgcaagc tcggcagcga atttattcgc accgtacacg gcatcggcta
     5881 caccctgggt gacgcatgaa attgacgcaa cgtctcagcc tgcgcgtcag gctgacgctt
     5941 attttcctga ttctggtctc catcacctgg gcaatttcca gttttgtggc ctggagaaag
     6001 acgacggata atgtcgatga gctgtttgac acacagttga tgttgttcgc cagacggctt
     6061 agcaccctcg atcttaacga gctcaacgcc ccgcagcgca tggcgcatac gccaaagaaa
     6121 ttaaaacatg ggcatatcga tgacgatgcg ctggcgttcg ccatcttttc cgctgacggc
     6181 aaaatgttgc tgcatgatgg cgacaacggc caggatattc cgtatcgcta tcgccgggaa
     6241 ggtttcgaca atggctatct gaaggatgac aacgacctct ggcgtttttt gtggttgaac
     6301 tcggcggacg gcaagtatcg tatcgtcgtc ggtcaggagt gggattaccg cgaagatatg
     6361 gcgctggcga tcgtggcggc gcaattaacg ccgtggctga tcgcccttcc cttcatgctg
     6421 ctgattttat tactcctgct tcaccgcgag ctcagaccgt tgaaaaaact ggcgcaggcg
     6481 ctgcgcttcc ggtcgccgga atcggaaacg ccgctcgacg ccaaaggcgt accgagcgag
     6541 gttcgcccac tggtcgaagc gcttaatcag ctttttagcc gcatccactc catgatggtg
     6601 cgcgaacggc gatttacctc cgacgccgcc catgaattgc gcagcccgct ggccgcgctg
     6661 aaagtacaaa ccgaggtggc gcagctctcg ggcgacgatc cgctatcgcg tgataaagcg
     6721 ctgacccagc tccatgcggg gatcgatcgc gccacgcggc tggtcgatca gctactgacg
     6781 ttatcgcgtc tcgactcgct caataatttg caggatgtag cggagatttc gctggaagag
     6841 ctgctgcagt ccgcggtaat ggatatttat catccggcgc agcaggcgaa tatcgacgtg
     6901 cgtttacagc ttaacgccca tgacgtcata cgtaccggcc agccgctact cttaagcctg
     6961 ttagtgcgta acctgctgga taatgcgatt cgctacagtc cgcagggcag cgtcgtcgac
     7021 gttaccttac atgcccgcag cttcaccgtc agagataatg gccccggcgt agcgccagag
     7081 attctaacgc atatcggcga gcgtttttac cgcccgccag gccaaagtgt gaccggcagc
     7141 ggtctgggat tatcaatcgt ccgccgcatc gctacgctgc acggcatgac ggtgtcgttt
     7201 ggcaacgccg cggaaggtgg atttgaggcc gtagtacgct ggtagcagag atttttgcca
     7261 aaaacgcaaa agactttgca cattttgcta atttcaccgc accgcccgtc agcgtagaat
     7321 cagcagcaaa cgcatttctt gaggacacaa aatgagtaac atcctgatta tcaacggggc
     7381 gaaaaaattc gcgcactcca acggccagtt gaatgacacc ctgaccgaag ttgccgatgg
     7441 gctgctgcgc gatctgggtc atcaggttaa gatcgtccgc gccgacagcg actatgacat
     7501 taaagaagag gtgcagaatt tcgtctgggc tgacgtggtg atttggcaga tgccaggctg
     7561 gtggatgggc gcgccatgga cagtaaaaaa tatatggatg atgtctttac cgaaggtcac
     7621 ggcacgctct atgccagcga tggccgcacg cgttccgatg ccgctaaaaa gtacggttcc
     7681 ggcggtctgg tgcaggggaa aaaatatatg ctgtcactga cgtggaacgc gccgatggaa
     7741 gcatttaccg aaaaagatca gtttttccac ggcgtaggcg tagatggcgt ctatctgcca
     7801 ttccataaag ccaaccagtt cctgggcatg gacgcgctgc caacgtttat tgccaacgac
     7861 gtgattaaaa tgccggatgt tccgcgctat accgcagaat atcgcaagca tcttagcgaa
     7921 atttttgctt aactggtcat cctggaatta gaaggagtta accatgctta ccgtcattgc
     7981 cgaaattcgc acgcgtccgg gccaacatca ccgtcaggcc gtcctcgatc agtttgcgaa
     8041 aattattcca accgttctta aagaagaggg gtgccacggt tacgcgccga tggtggatca
     8101 tgccgcgggc gtgagttttc agactctggc gcctgactcg atcgtgatga ttgaacagtg
     8161 ggaaagcgtt gcgcaccttg aagcgcatct gcaaaccccg catatgaaag cctatagcga
     8221 cgcggtaaaa gacgatgtgc tggaaatgaa tattcgtatt ctggaatccg gcgtttaagt
     8281 tattaccctc gtctgacgtc gccctgatgc gatgcgcaag tgtcgccatc aggctgcgac
     8341 gtcatgtcgg attctcttat ccggcctgcg gcgcgcagac cggataaagc gtgcaacaat
     8401 cgttacacgt cgagatccgc gagatcgcct ttttcctgta gccagttgcg tcgatcttca
     8461 gaacgtttct tcgccagcag catatccatc atcgcattag tacgctgatc gtcttcatcg
     8521 ctaatggtga gctgcaccag gcggcgagta ttcggatcaa gcgtggtttc gcgtaactgc
     8581 atcgggttca tttcacccag gcctttgaaa cgctggacgt tcggcttgcc tttcttacgc
     8641 ttcagttgtt ccagtacgcc cgccttctct tcttccgtca gcgcgtaata gacctcttta
     8701 cccaaatcga tacggtatag cggcggtagc gcgacgtaga catgaccatt cttcaccagc
     8761 gcgcggaagt gtctgacaaa cagcgcgcaa agcagagtag cgatatgcaa accatcggag
     8821 tccgcatccg ccaggataca gatcttgccg tagcgcagct gactcagatc gtcgctgtcc
     8881 ggatcgatac cgatcgccac ggaaatatca tgcacctctt gcgaggccag cacttcatcg
     8941 gaagagactt cccaggtgtt aaggatctta cctttgagcg gcatgatcgc ctgatattcg
     9001 cgatcgcgcg cctgcttggc ggaaccgcct gccgaatccc cttccacaag gaacagctcg
     9061 gttcgattaa gatcctgcgc ggtacagtcc gccagtttcc ccggcaacgc cggaccgctg
     9121 gtgagttttt tgcgtaccac tttttttgcg gcgcgcagtc gccgctgcgc gctggcaatc
     9181 gccatctctg ccagttgttc cgccgcctgc acgttctggt tcagccacag gctgaaggca
     9241 tctttcacca cgccggaaac aaatgccgca cattgacgcg acgacagacg ctctttggtc
     9301 tgcccggcaa attgcgggtc ctgcattttc acggagagca cataagcgca gcgatcccag
     9361 atatcttccg ccgacagttt gacgccgcgc ggcagaatat tgcggtattc gcaaaattcg
     9421 cgcatcgcgt cgagcaggcc ctggcgcaga ccgttgacgt gcgtcccccc ctgcatggtc
     9481 gggatcaggt tgacgtagct ttccgtcagt aattcgccgc cttccggcag ccacaatagc
     9541 gcccagtcaa ccgcttccgt ttcaccgtta aaattaccga taaacggctt ttccggcagc
     9601 gtcggcaggc cgtttaccgc ttcgcccaga tagtcgttca gaccatcctg gtagcaccag
     9661 cgctgctcgc tgttattcac ttcatcttta aaagtgattt ccacgccggg acacagcacc
     9721 gcttttgctt tcagaacgtg cattaagcga gagacagaaa aacgcgggct gtcgaagaaa
     9781 ctttcgtccg gccagaaatg gacgctggtg ccagtattac gtttaccgca ggtgccgaca
     9841 acctgcaaat cctgcacttt ttcgccgttt tcaaacgcga tgttatagac ctgaccgtcg
     9901 cggcgcacgg tcacttccac gcgctttgac agggcattca cgaccgaaat ccccacccca
     9961 tgcagaccac cagagaactg atagttctta ttggagaatt taccgccggc atgaagccga
    10021 cagaggatca gttctaccgc cggaaccccc tcttccggat ggatatccac cggcatcccg
    10081 cgtccgtcgt caatcacttc cagcgattga tcggcatgta aaatgacatc cacgcgtttg
    10141 gcgtgacctg ccagtgcttc atccacacta ttatcaatta cttcctgacc caaatggttg
    10201 gggcgggtcg tatcggtgta catccccggg cggcggcgta ccggctcaag cccagtgagt
    10261 acctcaatgg catcagcgtt ataagtttgc gtcatggttt aattagcaat tcgaattgat
    10321 tgtcagcaac tgtgcagtcc aagaaaatcg acaatctggt tgaaataatc ttcgaagccc
    10381 gtgaatgcgt gattaccccc ctcggtcact gtctgacggc aggaggcgta atatgccacc
    10441 gcctggcggt aatccagcac ttcatcgccc gtctgttgca gtagccagat caggtccggc
    10501 gcttccagcg ggtcaatctg catgacttta agatcataaa tatggcgaga ctctagcaca
    10561 tattgctgcc cggtgtaggg gttctcgttc tgaccgagat agtcggtcag taattcaaag
    10621 ggccgcacgg cgggattcac caccacagcc ggcagcataa aacattgcga cagccaggtg
    10681 gcgtaataac cacccagcga cgatcctacc agccctaatg gcgcaccgcc atgctcaagt
    10741 acgagagatt ccagcaactc cgccgcatcg gcaggatacg gcggcagttg agggacgatc
    10801 atctcaacat gcggatgacg ctccgccagc cagtttttta gctggcacgc ttttgccgag
    10861 cgaggggaac tgttgaatcc gtgcaaatag agaagcgtag acatcagtat ccttccgaag
    10921 cggtatcggg tcggaaccgg gtatcctgca ggcgatgcac ttccgtctcc aggacgccgt
    10981 tcgcctggag ctccagcgta cgccagcccg gcgcgatagt atccagcgta aagttcgcgc
    11041 agtgcggttt gaactgtacg caggttgacg gcgacgccaa cagacggcga ccgttccagt
    11101 cgagatccag ctcctggtga atatgtccgc atagcagata ctttacacgc gggaaattcg
    11161 ccagcacgct atccagctca ccagcattac gcaagctgtg ctgatccagc caactgcacc
    11221 ctgccggcaa cggatggtgg tgcaacagga gcaatgtctg tctctctggc gcatcggcga
    11281 gcttacgctc aagccattcc agttggaact cgctcagttc gccatgcggg acgccaaaca
    11341 cctggctatc cagcaacaaa atctgccatt gttcaccgat taacacgcgt ttagccgggg
    11401 aaatccccgc ctcttgcagc gcgctgtaca ttgccggctg aaaatcgtga ttgcccggta
    11461 gccaaacgca aggcgcgcga aagcttgcga taccctcagc aaaatgctga taagccgcag
    11521 cggattgatc ctgcgccaga tcgccggtcg ccacgatcag atcatattca tactgttgcg
    11581 cccgaatagc ctccagcacg gcctggtaac tttcccaggt attgacgcct aacagcgttt
    11641 catgcttttc ggcaaacagg tgagtatctg taatttgtaa aatcctgact cgggcctcac
    11701 cagccagagg tagggttaac aggctttcca aatggtgtcc ttaggtttca cgacgctaat
    11761 aaaccggaat cgccatcgct ccatgtgcta aacagaatcg tagccagtcg gccagaaact
    11821 gattaatttg atgcttttcg tcgcgttgat gcaacttttt atttggataa tcataccgcg
    11881 ctttgaagcg aaagatctgc tggcttgaac acacttcagc caccatcgca tcatggtaga
    11941 ggcgcaccgt cagcgacggc aggctccagt aggtgatggc tggcgccgtt tgctcgatcg
    12001 ttacaagcgt agtgtatcgg gtcaattcca caatcgttaa ccgatattgt acgttgccca
    12061 cctgatagct caccgtttca ccgggggcgt cattgcgcgg cagcaggcgg cgcaattgcg
    12121 aaaaattggt ttcgcacaaa cgcatcattt ctgggaagtc aggtgtataa cgcttcattt
    12181 tttccactcg ttttttaact cttgatgatg caactgaagc cattgcaaag cgatgactgc
    12241 ggctgcgttg tcgattttcc cctcttctac ccactggtat gcctgttccc ggcttaccac
    12301 atgaacccga atatcttcgt tttcatccgc cagaccatga atacctaccg cggtcgtggc
    12361 gtccacttca cccaccagaa tagatgagcg ctcgctggtt cctcctggac tcgccaggta
    12421 actgatgacc ggtcgggtgc ggcctacggt cagccccgct tcttccatcg cctcccgccg
    12481 ggcgaccgcc tcaatggttt cgccttcttc tatcatgccg gcgaccatct ccagcagcca
    12541 cggcgtaacg cttgtgtcat atgcggcaat acgaatctgt tcgaccagca ccacctcgtc
    12601 gcgttcaggg tcaaagggta gcaagacggc ggcgtgcccg cgctcaaaaa tttcgcgctt
    12661 tacctcgcca ctcatttctc cgttgaataa acgatggcgg aatcgataca catccaatga
    12721 aaaaaaaccg cgatagcgcg tttcccgtgc aataatttct acatcgcttt tggtgaaagt
    12781 aactggcaag ttgtctgatt tacgcattgt gctgccctgc tagcaataat gattaaatga
    12841 tgaatttcaa gggtggttga ctgctgtttt atcacccttg tggtaaattg gtgccaatta
    12901 aggctcgtat ggcacgtaac gccaactttt tgcagtggcg gattctgcta gaatcagcaa
    12961 ttatttttac aaattgatca gcgctaaata ctgcttcaca acaaggaatg caaatgaaga
    13021 aattgctccc catccttatc ggcctgagcc tgtcggggtt cagcacacta agccaggcag
    13081 agaacctgat gcaagtttat cagcaagcac gcctgagcaa cccggaattg cgtaaatccg
    13141 ctgccgatcg cgatgctgca ttcgaaaaaa ttaacgaagc acgtagtcct ttactgccgc
    13201 aactgggttt aggtgccgac tacacctaca gcaacggtta tcgcgatgcg aacggtatca
    13261 actccaatga aaccagcgct tctctgcaat taacgcagac gctatttgat atgtcgaaat
    13321 ggcgtgggct caccctgcaa gaaaaagcag caggcattca ggatgtcacc tatcagaccg
    13381 atcagcagac gctgatcctc aataccgcga acgcgtattt taaggtattg aacgctattg
    13441 atgtgctttc ctatacccag gcgcaaaaag aggctatcta ccgtcagtta gatcaaacga
    13501 cgcaacgttt taacgtgggt ctggtcgcca ttaccgacgt gcaaaacgcc cgtgcgcaat
    13561 atgataccgt actggcgaat gaagtgaccg cccgcaacaa cctggataac gcggtagaag
    13621 agctgcgcca ggtaaccggc aattattacc cggagctggc gtcgcttaac gtcgagcatt
    13681 ttaaaaccga caaacccaaa gctgttaatg cgctgctgaa ggaagcggaa aaccgtaacc
    13741 tgtcgctgtt gcaggcgcgt ttaagtcagg atctggcgcg cgagcaaatc cgtcaggcgc
    13801 aggatggtca tctgccgacg ctgaatttaa cggcctcaac cggcatttct gatacctctt
    13861 atagcggttc taaaaccaac tccgcccagt acgacgatag caacatgggg cagaataaaa
    13921 tcggcctgaa cttctccctg ccgctgtatc aaggcgggat ggttaactcg caggtaaaac
    13981 aggcgcagta taacttcgtc ggcgcaagcg aacagctgga aagcgcgcac cgtagcgtgg
    14041 tgcagaccgt acgttcttcc tttaacaata ttaacgcctc catcagcagc atcaacgcgt
    14101 ataaacaggc agtcgtttcc gcgcaaagtt ctttggatgc aatggaagcc ggttactcgg
    14161 tcggtacacg taccattgtt gacgtactgg atgccaccac cactctgtat gatgccaagc
    14221 agcaactggc caacgcgcgt tatacctatt tgattaatca gttaaatatc aaatatgcgc
    14281 tcggtacgct gaacgagcag gatctgctcg cgcttaacag tacgttgggt aaacctatcc
    14341 cgacgtcgcc ggaaagcgta gcgccggaaa cgccagagca ggatgctgcc gcagacggtt
    14401 ataatgccca tagcgccgcg ccggcagtac agccgaccgc cgctcgcgcc aacagcaata
    14461 acggcaatcc attccggcat tgataagtta ttcgctggcg ctgcgtttat cagacctatg
    14521 cccttgtagg tctggtaagc gcggcgctac ctgtcataaa gccgcgcctg aacgtaagac
    14581 aacgtaaaga tcctgctatt ccgccgcatt ctcgcctttt ctcgcttcaa tttcgaccag
    14641 tcatcctcta ttctgaacgc atgttgtatt taccactggg tcctggaaga caaatatgaa
    14701 acggacaaaa tccatccatc acgcatcatt tcgcaaaagc tggagcgcgc ggcatttaac
    14761 gccggtcgcc ctggcggtta cggctgtttt tatgctggct ggctgtgaaa aaagcgatga
    14821 aaccgtatcg ctgtatcaaa acgctgatga ctgttcagcg gcgaatccgg gcaaaagcgc
    14881 ggaatgtaca accgcgtata acaatgcgct gaaagaggcc gaacgtactg cgcctaagta
    14941 cgctacacgc gaagattgcg tcgctgagtt tggcgaaggc cagtgccagc aagcgcccgc
    15001 acaggctggc atggcgccgg aaaatcaggc gcaggcccaa caatccagcg gcagtttctg
    15061 gatgccgctt atggcaggtt acatgatggg gcgtctgatg ggcggcggcg caggctttgc
    15121 gcaacagccg ctgtttagct cgaaaaaccc ggccagccct gcatacggca aatataccga
    15181 tgcggcaggt aaaaactacg gggcggcgca accgggccgg acaatgaccg taccgaaaac
    15241 cgcgatggcg ccgaaacctg ccaccacaac aaccgttacc cgcggcggtt ttggcgaatc
    15301 cgtcgccaaa cagagcacta tgcagcgtag cgctgccggt acttcaacac gttcgatggg
    15361 cggctgatac gcatggaaag agtcagtatt accgagcgcc cggactggcg cgataaagcg
    15421 actgaatacg ggtttaattt tcacactatg tatggtgaac cgtactggtg tgaagacgct
    15481 tattacaagt taacgctcgc ccaggtggaa aaactggaag acgttaccgc cgagctgcac
    15541 cagatgtgcc tcaaggtagt agaacgcgtc atcgccagcg atgagctgat gacgaagttt
    15601 cgtattccaa aacatacctg gggttttgtt cgccagtcct ggcaaacgca acaaccgtca
    15661 ctctattccc gcctcgattt ggcctgggac ggcatcggcg agcctaagct gctcgaaaat
    15721 aatgccgaca cgccaacatc gctgtatgaa gcggcgtttt ttcagtggat ttggctggaa
    15781 gatcagatca acgcgggcaa tctgccggaa ggcagcgatc agtttaatag cctgcaggaa
    15841 aagctgattg aacgctttgc tgaacttcgc gaacagtacg gttttcagtt gctgcatctc
    15901 acctgctgtc gcgatacggt tgaggatcgc ggcaccattc agtatttaca ggattgcgcg
    15961 gccgaagcgg aaatcgccac cgaatttctc tatatcgacg atattggtct gggggaaaaa
    16021 ggtcaattta cggatctgca ggatcaggtc attgcgaacc tgttcaagct ctatccgtgg
    16081 gaatttatgc tacgcgagat gttttccacc aagctggaag atgccggcgt gcgctggctg
    16141 gaaccggcct ggaaaagcat tatctccaat aaagcgttat tgccgctgtt gtgggagatg
    16201 ttcccggacc atccgaatct gttgcctgcg tatttcgccg aagacgaaca tccgccaatg
    16261 gataaatatg tcgtgaaacc gatcttctcc cgcgaagggg cgaacgtatc gattattgag
    16321 aacggtaaaa cgatcgaatc cgtggaaggc ccgtatggcg aagagggtat gatcgtgcaa
    16381 cagttctatc cgctgccaaa attcggcgac agttacaccc tgattggtag ctggctgatt
    16441 aacgatcaac ccgccggaat tggtatccgt gaagatcggg cactgatcac ccaggatctc
    16501 tcccgcttct atccgcatat ttttgtcgaa ggatagattt tcctgtaagc ccgatgcgcg
    16561 tagcgccatc gggcaatcat tcagcgcctt atccggccta ccccacctgc accgacaaca
    16621 tacttatact gcccatctca ataccgtcga ccgggatggt gataggttcc ttgccgtccc
    16681 aggcgccaag tacatacagc aaaggcaaaa agtgctccgg cgtcgggttc gataaggcgc
    16741 ccccttcatg ttgcagataa ttcaccagcg ggtgctgttc taccggcccc tgccacgtca
    16801 ggttagcttt cacaaagtca ttaaatgacg ccgcccaggg atacggtata ttgtcaccgt
    16861 gccaacgcac agtccgcagg ttatgaacca cattcccgct agccaccagc atcacgcctt
    16921 cgtcacgcag cgtcgccagt ttacgaccca tctcaaaatg ccatgccgcc ggtttggtac
    16981 tatcaacact aagctgcacc atcgggatat ccgcattcgg gtacatcttg atcaatacgc
    17041 cccaggagcc gtgatcaaat ccccacgcct ctttatcgag cgcgacggga acgggagcca
    17101 acagttcaac cagacgctgc gccagcgcag gcgatccagg ggccggataa tgcatgtcat
    17161 acagcgcctg cggaaaaccg ccaaaatcgt ggagagtttg cggcctttcc atcgctgtga
    17221 cgcccgtccc acgggtatac cagtgcgccg acaccaccac tatcgcctgt ggtcgcggta
    17281 gggcttcccc caatcgccgc caggcgcggg tataatcatt atcgtccagc acgttcatcg
    17341 ggctgccatg ccccaaaaac aatgctggca tacacgttaa agacatgatg ttatccttac
    17401 aggaaagaca ttttgttaac atcaccatac gctttcttca cagaggaaga actcagataa
    17461 ctatgatgaa gatcatcagt tattttgaag gtcaggttcg gacggcaaat tgataaggag
    17521 taatggatgt cagtaccact tattctgacc ttactggcgg gcgctgccac ctttattggc
    17581 gcgtttcttg gcgttcttgg ccaaaaaccg tctaaccgcg tgctggcttt ttcgctgggc
    17641 ttcgccgcag ggatcatgct gctcatctcg ctgatggaga tgctgcccgc cgcgttagat
    17701 accgagggga tgtcgcctgt actgggctac gggatgttta ttatcggcct gttgggctac
    17761 ttcgggctgg atcgtctgct tcctcacgct catccgcagg atctggtgca aaaaaggcag
    17821 cagccgcttc ccggctcgat aaaacgcact gcgattttat tgacgctcgg cattagcctg
    17881 cacaactttc cggaaggaat cgccaccttt gtcactgcca gcagcaatct tgaactgggt
    17941 ttcggcatcg cactggcggt ggcgttgcac aatattcctg aagggctggc ggttgccggc
    18001 ccggtttatg ccgcgacggg ctcaaaacgt accgcgattt tttgggccgg tatctccggc
    18061 atggcggaaa ttcttggcgg cgtgctggcg tggctgattt tgggcagcct ggtttcaccg
    18121 atcgttatgg cggctatcat ggcagcagtc gccggcatta tggtggcgct ctccgtcgat
    18181 gaactgatgc cgttggcaaa agagatcgat cctaacaata accccagcta tggtgtgctt
    18241 tgcggtatgt ccatcatggg gctcagtctc gtcattttgc agacgatagg tatcggttaa
    18301 gagcaacgtc gcgccggatg caggccttta gccaggcaac atccggctgc ccgtcaagga
    18361 tatgcgctat ttctgctcat tcatcacgct gtcgccttcg ctcgtctggc gaaaacgttt
    18421 cgttcgcgct tcaagtaatg catctctgtc ttgccgaaac gctctgcaat aacgcttcat
    18481 atggcaaata taccctacta ccaccagaac gattaatatt atccaatacc aggcaataaa
    18541 catccttttt acccttaaaa tttaacatca ctaaacattt aacgttaaaa ttttacatac
    18601 ccttattttg acgtattcat atactggcat atttgtggaa caaataaatg attttgatca
    18661 tataaatcag tggtgaaaca caataatgaa agaggtatta agcagaaaac aatgtcgata
    18721 agatcacact tcgtactaat ttatattgtt cttaaaatat cacactccta ctatcgactc
    18781 actcaggcaa ttaaaaaata ttgatacaga atatacttta aaataagtaa cagcatcatg
    18841 acttatattt aaagaccaat catttacctc atttattatt cataaaaaca tagtatattc
    18901 agaagtatta tatttagaag ttgtatataa ggagatatat ccatgtttga ccaataccgg
    18961 aaaacaatac ttgccggcgc cgtcgcactg acatgcggac tcaccgcagc cagtacgttt
    19021 gccgcaggtt ttcaaccggc gcagcccgca gggaaattag gcgcagtcgt tgtcgatcct
    19081 tacggtaatg cccctctcac cgcactggtg gaattagata gccatattat ttcagacgtt
    19141 aaagttactg tacatggcaa aggggaaaaa ggcgttcccg ttacttatac cgttgggaaa
    19201 gagtctttag aaacctatga cggtattcct atttttggcc tttatcagaa atttgccaac
    19261 aacgtcacgg tagaatataa agaaaacggc aaagccatga aggatgacta tgtggtgcag
    19321 acgtccgcca tcgtcaacca ttatatggat aaccgttcta tttcagatct ccagcaaacg
    19381 aaagttatta aagttgcgcc aggatttgaa gatcgccttt atctggtaaa tacccatacc
    19441 tttacgccgc agggcgctga atttcactgg cacggcgaaa aagataaaaa tgcgggcatt
    19501 cttgatgccg gcccggcggg cggggctttg cctttcgata tcgcccctta tacgtttgtg
    19561 gtcgacaccc agggtgaata ccgctggtgg ctggatcaag ataccttcta caacggccac
    19621 gatatgaata tcaacaaacg tggctacctg atggggattc gtgaaacgcc tcgcggcacc
    19681 tttaccgcgg tgcagggcca acactggtac gagtttgaca tgatggggca aattcttgcc
    19741 gatcataaac tgccgcgcgg gttcctggac gcatctcatg aatccatcga aaccgtgaac
    19801 ggtaccgtac tgctgcgcgt cggcaaacgc gattaccgca aagaagacgg catacatgtt
    19861 catactattc gtgaccaaat cattgaggtt gataagtctg gccgcgtagt agacgtttgg
    19921 gatttaacca aaatcctcga ccctatgcgt gatgcgctgc tcggcgcgct ggatgcgggc
    19981 gcagtatgcg tgaacgtcga tctggcccat gccggacagc aggcgaaact cgaaccggat
    20041 acgccgtatg gcgatgcgct tggcgttggt gccggtcgta actgggcgca cgtcaactct
    20101 atcgcttatg acgcgaaaga cgactccatc atcctttctt cccgccatca gggtattgta
    20161 aaaattggtc gcgataagca ggtgaaatgg atactggcac cgtctaaagg ctggaataag
    20221 cagctagcca gtaaattgct gaaaccggta gacgatcatg gtaagccgtt gacctgtgac
    20281 gaaaacggca agtgtaagga caccgatttc gatttcacct atacccaaca tacggcatgg
    20341 ctttccagca aaggtacgtt aacggtcttt gataacggtg atggtcgcgg cctggagcaa
    20401 ccggctctac cgaccatgaa atattcccgt tttgtcgaat ataagatcga tgagaagaaa
    20461 ggcaccgtac aacaagtttg ggaatacggt aaagaacgtg gatatgattt ctatagtcct
    20521 attacctcgg ttgttgaata tcaaaaagac cgcgacacca tgttcggctt tggcggttct
    20581 attaacctgt tcgacgttgg taaaccaaca gtcggcaaac tgaatgagat tgactataaa
    20641 acgaaagaag tgaaagttga aattgatgtg ctgtcggata aacccaacca gactcactat
    20701 cgtgcgttac tggtacatcc aacacaaatg tttaaataaa tcacgggaag gaattaatat
    20761 gtcatctaaa tggattacct ctttatttaa aagcgtagta ttaaccgcgg cattggtcac
    20821 tccttttgcg gcatcggctt ttaccgaggg cacagattat atggttctgg agaaaccaat
    20881 tcctaatgcg gataaaacgc tgattaaggt atttagctac gcctgccctt tctgctacaa
    20941 atatgacaaa gccgtaacag gtccggtttc tgataaagtc gccgatctcg ttacgttcac
    21001 cccgttccac ctggaaacaa aaggcgaata tggcaaacag gccagcgaag tatttgcagt
    21061 cctgatcgcc aaagataaag ctgccgggat ttcgttattt gatgctaaat cacaattcaa
    21121 aaaagcgaag ttcgcctggt atacggctta ccatgataag aaagagcgct ggtcagatgg
    21181 gaaagatccg gcggcattta ttaaaaccgg gctggacgcc gcaggcatga gccaggctga
    21241 ttttgaagcg gcgctgaaag atcctgccgt tcaggagact ctggaaaaat ggaaagcagc
    21301 ctatgacgtt gccaaaattc agggtgttcc ggcttacgtc gtcaacggca agtaccttat
    21361 ctacaccaaa aacatcaaat ccatcgattc tatggctgaa ctcgttcggg aactggccac
    21421 taaaaaataa gcagggaaac gattatggat tttattaagg gattatggcg agacctacgc
    21481 gcaagaccag tggatacgct ggtgagatgg caggaacagc gctttctgtg gctgttaatg
    21541 gccatcgcga tgggaggatt aattatcctg gcgcactcgt tcttccaaat ctacctctac
    21601 atggcaccgt gcgagcagtg tgtttacatc cgttacgcga tgtttgtgat ggtaattggc
    21661 ggggtgattg cggcaataaa tcccaaaaat attgtgctga agctgattgg ctgcatcgcg
    21721 gcgttttatg gcagcattat gggcattaag ttttctatta agcttaatgg tatccatcat
    21781 gcggtacata atgcggaccc cgattcactt tttggcgtgc aaggatgttc gactgacccg
    21841 acctttcctt tcaacttacc gttggcggaa tgggcaccgg agtggtttaa acctaccgga
    21901 gactgcggtt atgacgcgcc tatcgtccct gatggcgtga cgctcagtag cgtacagcag
    21961 tggtttgtcg atctctacca gcagtccgaa ggctggtatc tgcttccgcc ctggcacttt
    22021 atgaacatgg cgcaggcatg tatgttggcc tttgggttgt gcctgattct gctgctggtg
    22081 atgagcggcg cctgggcatt gaaactggcc agaggcaaat aacctgaata gataaaccaa
    22141 agcagaggtc tgcattcagg cctctgcttt tctcacaata attttaccat tcagcttatt
    22201 cgtcgttctt tgaaactgaa caatatggca ccgaaggaat acaaaaaagc cgatgagatg
    22261 tcatcggctt ttttcaacca tgatccgttc gatcagctgg ctttgcgctc atgcgcctgg
    22321 cggtaagcca ccagatcttc aatcgtgacc accgccatat tatgctggcc tgcaaacgcg
    22381 atacactccg gcgcgcgcgc catcgtccca tcgtcgttag tcaactcgca cagtacacct
    22441 gcaggtttaa aaccggccag cgtcatcaga tcgatggtcg cctccgtatg accgccgcgc
    22501 gtcagcacgc cgcccgcctg agcgcgcagt gggaaaacgt gccccggacg gttaagatcg
    22561 gacggttttg cgccatcctt aattgccgca cgcaccgtag tgacacggtc agcggcggaa
    22621 acgccggtgg tcacgccttc tgcggcttca atggtcacgg taaaaccggt gccgtaggcg
    22681 ctggtgttgt tttccaccat cattggcaaa tcgagctgct tacggcgatc ttcagtaata
    22741 cacaggcaaa caataccgct accgtgacga atggttaacg ccatctgttc tacggtcatt
    22801 gtctctgcgg ggaaaatcat atcgccttcg ttttcacgat cttcatcatc aagcaccatc
    22861 acaccgcgtc cttcacgcag cgcatccagt gcaagttcaa cacgttcaaa aggcgtacca
    22921 aaagaggaaa gtagcgtctg attcatggta aaaaaacctc attaacatta tggttaccag
    22981 aatcagggca gtcttaggag tgccgacaag cggcaaaaaa ataacgtgag cgggtccatg
    23041 cccgactgga tcgttaccct ctcccatccg gactttaacc gtcggccccg gaattacacc
    23101 ggatctgctg accttttcgc tatggcaaaa agcgctcgcg ggctttcaac ctgctctccg
    23161 cgttccgtca cggcgcaccg tgatgagaaa tgcgttaaac atcgctgatt taccgccggt
    23221 ggggaatttc gccccgccct gagaataagc gggttaacta taacgctatt gattaccttc
    23281 atcaacgcct ttactccgta tgacatcaca caattctggt ttatggcgtc cacatatcgc
    23341 actacaataa gagctaacac ttaccagttc agggaaacca caatgattga cccgaaaaaa
    23401 attgagcaaa tcgcacgcca ggttcatgag tcaatgccga aaggtattcg cgagttcggg
    23461 gaagatatcg agaaaaaaat ccgtcaaacg ctgcaatctc agctgacgcg tctcgatctg
    23521 gtgagccgcg aagagtttga tgtccagact caggtcttgc tgcgcacccg ggaaaaactg
    23581 gcgctgctgg agcaacgcct cagcgaactg gaagctcgcg acaagcctga agaagtaaaa
    23641 cctgcgcccg ccattccgcc agtcgatcca caagagtaaa aacgtgaacg ggcctgacgg
    23701 cccgctcata taagatctga ataatgccct gcgcctgtat aagggagcct gcattagtgt
    23761 tctaattcta actttttcgc ctgagtcgcc tgctggcagt aaagcgcgta acgcttgcaa
    23821 aaccagtcgc ggtgctcctc gtccatattg ccggttaccg cctggatatc aacaggacgc
    23881 ccctccgcct gcattctggc aaagctgcgc gccagaaaat cgaaattatt taatgaatag
    23941 acgttattgt tgttcatcag cataccctcc agttattgaa ttctgttaag gctatatgct
    24001 ttttctaatt tcagtatttc cctatatgta cggcggtttt atacataacg tgcgcaaatt
    24061 taatgcgcaa aatcacaata ttcaccaaag ataacgacgg ataaatcgct tttcggactt
    24121 aaggagatat gggtcacatg atattgtaac gcaatgaaat aacaagcatg aaaattatca
    24181 cgcgaacatc cttctgaagg cggcgacaag gatagaaaat atgaccttat ttgcggagta
    24241 taacagcccc tatctgtttg ccatcgcgtt cgttttcttt atcggcgtgc tggagatgat
    24301 ttctctgatt tttggccact ttctttcagg cgcgctcgac gcccatctcg atcattatga
    24361 tgccctgtca tccggccctg cgggccaggc gcttcattat ctgaatattg gacgcgttcc
    24421 cgccctagtc gtcctctgtc tattggccgg ctatttcggc ctcttcggta tcctcatcca
    24481 gcatggcggg atcatgctct ggcaggcgcc gctcagcaat ctgctgctgg tcccgttaag
    24541 cattgtcctg tcggtctttg ccgtgcatta cagcgaaaaa atcctcgcgc cctggctacc
    24601 cagagatgaa agctccgccc tccgggaaga ggaatttatc ggcggcatgg cgattattac
    24661 cggccacgcc gccgtcgccg gaacaccttg cgaaggaaaa tttaccgata agttcggcca
    24721 gattcactat ttactgctgg aacccgaaaa gggaaaagaa tttaaaaaag gagacaaggt
    24781 gctgattgtc tgccgacttt ccgcaacgcg ttatttggct gagcgtacct tctatgttta
    24841 attgagagga acttacataa tggatgatgt ttttggcata ttgccatcat ggatgtttac
    24901 cgccatcgtg gcggttatcg tcttactaat tatcgggatc atttttgctc gcctttatcg
    24961 ccgcgcatct gcggaacagg cgtttgtccg taccgggctt ggcgggcaaa aagtggtgat
    25021 gagcggcggc gctattgtga tgccaatctt tcacgaaatt attccgatca atatgaatac
    25081 cctaaaactt gaagtcagcc gtgctaccgt cgacagcctg atcaccaaag atcgtatgcg
    25141 cgttgacgtg gtcgttgctt tcttcgtgcg tgtaaaaccc tctgttgaag gtattgccac
    25201 ctccgcacaa acgcttggcc agcgaacgct gtcaccggaa gatctgcgta tgctggttga
    25261 ggataaattc gttgacgcct tacgcgctac cgcagcccag atgacgatgc atgagctaca
    25321 ggatacgcgt gaaaacttcg ttcagggcgt acaaaacacc gttgcggaag atttgtcgaa
    25381 aaacggcctg gagctggaaa gcgtctcatt aaccaacttt aaccaaacgt ccaaagagca
    25441 tttcaatcca aacaatgcct ttgatgccga aggtctgacg aaactgacgc aggaaaccga
    25501 acgccgccgt cgtgaacgta atgaagtgga acaggatgtg gaagtggcgg tgcgcgaaaa
    25561 gaaccgcgac gcgcttgaac gcaagctgga aatcgagcaa caagaagcct ttatgactct
    25621 ggagcaggag caacaggtta aaacccgcac cgccgaacaa aacgccaaaa ttgccgcttt
    25681 tgaggccgag cgccatcgtg aagcagaaca gacgcgcatt cttgctgagc ggcagatcca
    25741 ggagacggag atcgaacgtg agcaagcagt acggtccagg aaagttgagg ccgagcgtga
    25801 agtacgtatt aaagagatcg aacagcaaca ggtgacagaa atcgccaacc agacgaaatc
    25861 tatcgccatt gccgccaaat ccgagcagca a
//
LOCUS       DAGWFR010000048        25840 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.049, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000048 DAGWFR010000000
VERSION     DAGWFR010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 25840)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25840)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25840
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.049"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..347)
                     /locus_tag="MOX77_001998"
     CDS             complement(<1..347)
                     /locus_tag="MOX77_001998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HCA3357537.1"
                     /translation="MGQSAANLVDMRDVSFCRGERCIFDNISLTVPRGKITAIMGPSG
                     IGKTTLLRLIGGQIPPDKGEILFDGENVPAMSRSRLYTVRKRMSMLFQSGALFTDMNV
                     FDNVAYPLREHTN"
     gene            560..1537
                     /locus_tag="MOX77_001999"
     CDS             560..1537
                     /locus_tag="MOX77_001999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium/sodium antiporter"
                     /protein_id="HCA3357538.1"
                     /translation="MLLAMALLIIGLLLVAYGADRLVFAASILCRTFGIPPLIIGMTV
                     VSIGTSLPEIIVSVAASLHGQLDLAVGAALGSNITNILLILGLAALVRPFTVHSDVLR
                     RELPLMLFVSVVAGSVLHDGQLSRSDGIFLLLLAVLWLLFIVKIARLAERQGNDSLTR
                     EQLAELPREDGLPVAFLWLGIALVIMPMATRMVIDNATVLANYFAMSELTLGLTVIAV
                     GTSLPELATAIAGVRKGENDIAVGNLIGANIFNLAIVLGLPALIAPGEINPLAFGRDY
                     SVMLLVSVVFALLCWRHPRQIGRGAGILLTGGFIVWLAMLYWLSPLLVG"
     gene            1551..2537
                     /gene="kdsD"
                     /locus_tag="MOX77_002000"
     CDS             1551..2537
                     /gene="kdsD"
                     /locus_tag="MOX77_002000"
                     /EC_number="5.3.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose-5-phosphate isomerase KdsD"
                     /protein_id="HCA3357539.1"
                     /translation="MSHLALQPGFDFQQAGKEVLEIEREGLAELDQYINQHFTLACEK
                     MFNCTGKVVVMGMGKSGHIGRKMAATFASTGTSSFFVHPGEAAHGDLGMVTPQDVVIA
                     ISNSGESSEIAALIPVLKRLHVPLICITGRPESSMARAADVHLCVKVPKEACPLGLAP
                     TSSTTATLVMGDALAVALLKARGFTAEDFALSHPGGALGRKLLLRVSDIMHTGDEIPH
                     VNKHATLRDALLEITRKNLGMTVICDESMKIDGIFTDGDLRRMFDMGGDMRQLGIAEV
                     MTPGGIRVRPGILAVDALNLMQSRHITSVLVADGDQLLGVLHMHDLLRAGVV"
     gene            2558..3124
                     /gene="kdsC"
                     /locus_tag="MOX77_002001"
     CDS             2558..3124
                     /gene="kdsC"
                     /locus_tag="MOX77_002001"
                     /EC_number="3.1.3.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate-8-phosphatase KdsC"
                     /protein_id="HCA3357540.1"
                     /translation="MSKAGASLATCYGPVSTHVMTKAENIRLLILDVDGVLSDGLIYM
                     GNNGEELKAFNVRDGYGIRCALTSNIEVAIITGRKAKLVEDRCATLGIVHLYQGQSNK
                     LIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTHIA
                     GGRGAVREVCDLLLLAQGKLDEAKGQSI"
     gene            3121..3696
                     /gene="lptC"
                     /locus_tag="MOX77_002002"
     CDS             3121..3696
                     /gene="lptC"
                     /locus_tag="MOX77_002002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HCA3357541.1"
                     /translation="MSKTRRWVIILLSLAILVLIGINLADKDDPAAVMVNSNDPTYKS
                     EHTDTVVYSPEGALSYRLIAQHVEYFSDQAVSWFTQPVLTTFDKDKVPTWSIKADKAK
                     LTNDRMLYLYGHVEVNALVPDAQLRRITTDNAQINLVTQDVTSNDLVTLYGTTFNSSG
                     LKMRGNLRSKNAELIEKVRTSYEIQNKQTQP"
     gene            3665..4219
                     /gene="lptA"
                     /locus_tag="MOX77_002003"
     CDS             3665..4219
                     /gene="lptA"
                     /locus_tag="MOX77_002003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide ABC transporter
                     substrate-binding protein LptA"
                     /protein_id="HCA3357542.1"
                     /translation="MKFKTNKLSLNLMLAGSLLAASIPAFAVTGDTEQPIHIDSDQQS
                     LDMQGNVVTFTGNVVMTQGTIKINADKVVVTRPGGEQGKEVIDGYGNPATFYQMQDNG
                     KPVKGHASHMHYELAKDFVVLTGNAYLEQLDSNITGDKITYLVKEQKMQAFSEKGKRV
                     TTVLVPSQLQDKNKGQTPAQKKSN"
     gene            4226..4951
                     /gene="lptB"
                     /locus_tag="MOX77_002004"
     CDS             4226..4951
                     /gene="lptB"
                     /locus_tag="MOX77_002004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003861862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HCA3357543.1"
                     /translation="MATLTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTT
                     TFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGIGYLPQEASIFRRLSVFDNLMAV
                     LQIRDDLTAEQREDRANELMEEFHIEHLRDSMGQALSGGERRRVEIARALAANPKFIL
                     LDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAH
                     GTPTEILQDEHVKRVYLGEDFRL"
     gene            4999..6432
                     /gene="rpoN"
                     /locus_tag="MOX77_002005"
     CDS             4999..6432
                     /gene="rpoN"
                     /locus_tag="MOX77_002005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-54"
                     /protein_id="HCA3357544.1"
                     /translation="MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALENN
                     PLLEQTDLHDEIDTQQPQDDDPLDTADALEQKEMPEELPLDASWDEIYTAGTPSGPSG
                     DYIDDELPVYQGETTQSLQDYLMWQVELTPFSDTDRAIATSIVDAVDDTGYLTVSLDE
                     IRESMGDVEVDLDEVEAVLKRIQRFDPVGVAAKDLRDCLLIQLSQFDKSTPWLEEARL
                     IICDHLDLLANHDFRTLMRVTRLKEEVLKEAVNLIQSLDPRPGQSIQTGEPEYVIPDV
                     LVRKHNGRWTVELNSDSIPRLQINQHYAAMCNSARNDADSQFIRSNLQDAKWLIKSLE
                     SRNDTLLRVSRCIVEQQQAFFEQGEEYMKPMVLADIAQAVEMHESTISRVTTQKYLHS
                     PRGIFELKYFFSSHVNTEGGGEASSTAIRALVKKLIAAENPAKPLSDSKLTSLLSEQG
                     IMVARRTVAKYRESLSIPPSNQRKQLV"
     gene            6455..6742
                     /gene="hpf"
                     /locus_tag="MOX77_002006"
     CDS             6455..6742
                     /gene="hpf"
                     /locus_tag="MOX77_002006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome hibernation promoting factor"
                     /protein_id="HCA3357545.1"
                     /translation="MQLNITGHNVEITEALREFVTTKFAKLEQYFERINQVYVVLKVE
                     KVTHISDATLHVNGGEIHASAEGQDMYAAIDGLIDKLARQLTKHKDKLKQY"
     gene            6860..7351
                     /gene="ptsN"
                     /locus_tag="MOX77_002007"
     CDS             6860..7351
                     /gene="ptsN"
                     /locus_tag="MOX77_002007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS IIA-like nitrogen regulatory protein PtsN"
                     /protein_id="HCA3357546.1"
                     /translation="MINNDTTLQLSSVLNQECTRSGVHCQSKKRALEIISELAAKQLS
                     LPPQVVFEAILTREKMGSTGIGNGIAIPHGKLEEDTLRAVGVFVQLETPIAFDAIDNQ
                     PVDLLFALLVPADQTKTHLHTLSLVAKRLADKTICRRLRAALNDEELYQIITDTEGEQ
                     NEA"
     gene            7397..8251
                     /gene="rapZ"
                     /locus_tag="MOX77_002008"
     CDS             7397..8251
                     /gene="rapZ"
                     /locus_tag="MOX77_002008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HCA3357547.1"
                     /translation="MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPDLARTL
                     ADRQISAAVSIDVRNIPESPEIFEQAMNNLPGAFSPQLLFLDADRNTLIRRYSDTRRL
                     HPLSSKNLSLESAIDKESDLLEPLRSRADLIVDTSEMSVHELAEMLRTRLLGKREREL
                     TMVFESFGFKHGIPIDADYVFDVRFLPNPHWDPKLRPMTGLDKPVAAFLDRHTEVHNF
                     IYQTRSYLELWLPMLETNNRSYLTVAIGCTGGKHRSVYIAEQLADYFRSRGKNVQSRH
                     RTLEKRKT"
     gene            8248..8520
                     /gene="npr"
                     /locus_tag="MOX77_002009"
     CDS             8248..8520
                     /gene="npr"
                     /locus_tag="MOX77_002009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000216792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS phosphocarrier protein NPr"
                     /protein_id="HCA3357548.1"
                     /translation="MTVKQTVEVTNKLGMHARPAMKLFELMQGFDAEVLLRNDEGTEA
                     EANSVIALLMLDSAKGRQIEIEATGPQEVEALAAVIALFNSGFDED"
     gene            8765..9397
                     /gene="yrbL"
                     /locus_tag="MOX77_002010"
     CDS             8765..9397
                     /gene="yrbL"
                     /locus_tag="MOX77_002010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoP regulatory network protein YrbL"
                     /protein_id="HCA3357549.1"
                     /translation="MILLSKQTPLGAGRHRKCYTHPDNARRCIKVIYNRDHGGDKEIR
                     RELSYYAHLSRYLTDWSAIPRYYGTVETDCGTGYVYDMITDFNGAPSITLTEFAAQCR
                     YEEDVAVLRRLLKKLKRYLLDNHIVTMSLKPQNILCQRISESEVVPVVCDNLGESTFI
                     PLATWSTWCCERKLERVWQRFIAQPALAVALERDAQPKDKKRLALTSHEA"
     gene            complement(9472..10200)
                     /gene="mtgA"
                     /locus_tag="MOX77_002011"
     CDS             complement(9472..10200)
                     /gene="mtgA"
                     /locus_tag="MOX77_002011"
                     /EC_number="2.4.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monofunctional biosynthetic peptidoglycan
                     transglycosylase"
                     /protein_id="HCA3357550.1"
                     /translation="MSKRRIAPLTFLRRLLLRILAALAVFWGGGIALFSVVPVPFSAV
                     MAERQISAWLGGEFGYVAHSDWVSMADISPWMGLAVIAAEDQKFPEHWGFDVPAIEKA
                     LAHNERNESRIRGASTLSQQTAKNLFLWDGRSWVRKGLEAGLTLGIETVWSKKRILTV
                     YLNIAEFGDGIFGVEAAAQRYFHKPASRLSVSEAALLAAVLPNPLRYKANAPSGYVRS
                     RQAWIMRQMRQLGGESFMTRNQLN"
     gene            complement(10197..10850)
                     /gene="elbB"
                     /locus_tag="MOX77_002012"
     CDS             complement(10197..10850)
                     /gene="elbB"
                     /locus_tag="MOX77_002012"
                     /EC_number="4.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenoid biosynthesis glyoxalase ElbB"
                     /protein_id="HCA3357551.1"
                     /translation="MKKIGVVLSGCGVYDGTEIHEAVLTLLAIARSGAQAICFAPDKP
                     QADVINHLTGEAMAETRNVLIEAARITRGDIRPLSQAQPEELDALIVPGGFGAAKNLS
                     NFASKGSECRVDSDVVALAKAMHQSGKPLGFICIAPAMLPKIFDFPLRLTIGTDIDTA
                     EVLEEMGAEHVPCPVDDIVVDEDNKVVTTPAYMLAQDIAQAASGIDKLVSRVLVLAE"
     gene            complement(11077..13413)
                     /gene="arcB"
                     /locus_tag="MOX77_002013"
     CDS             complement(11077..13413)
                     /gene="arcB"
                     /locus_tag="MOX77_002013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aerobic respiration two-component sensor
                     histidine kinase ArcB"
                     /protein_id="HCA3357552.1"
                     /translation="MKQIRMLAQYYVDLMMKLGLVRFSMLLALALVVLAIVVQMAVTM
                     VLHGQVESIDVIRSIFFGLLITPWAVYFLSVVVEQLEESRQRLSRLVQKLEEMRERDL
                     KLNVQLKDNIAQLNQEIADREKAEAELQETFEQLKVEIKEREEAQIQLEQQSSFLRSF
                     LDASPDLVFYRNEDKEFSGCNRAMELLTGKSEKQLVHLKPEDVYSPEAAEKVIETDEK
                     VFRHNVSLTYEQWLDYPDGRKACFEIRKVPYYDRVGKRHGLMGFGRDITERKRYQDAL
                     ERASRDKTTFISTISHELRTPLNGIVGLSRILLDTDLTAEQEKYLKTIHVSAVTLGNI
                     FNDIIDMDKMERRKVQLDNQPVDFTSFMADLENLSGLQAQQKGLRFVLEPTLPLPHKV
                     ITDGTRLRQILWNLISNAVKFTQQGQVTVRARYDEGDMLHFEVEDSGIGIPQDEQDKI
                     FAMYYQVKDSHGGKPATGTGIGLAVSRRLAKNMGGDITVSSLPGKGSTFTLTVHAPAV
                     AEEVEDAFDEDDMPLPALHVLLVEDIELNVIVARSVLEKLGNSVDVAMTGKAALEMFA
                     PGEYDLVLLDIQLPDMTGLDIARELTRRHTREDLPPLVALTANVLKDKKEYLDAGMDD
                     VLSKPLSVPALTAMIKKFWDATDKEESTVTPEESDKAQALLDIPMLEQYIELVGPKLI
                     TDGLAVFEKMMLGYLSVLESNLTARDKKGVVEEGHKIKGAAGSVGLRHLQQLGQQIQS
                     PDLPAWEDNVVEWIEEMKQEWQHDVAVLKAWVANAEKK"
     gene            complement(13506..14435)
                     /locus_tag="MOX77_002014"
     CDS             complement(13506..14435)
                     /locus_tag="MOX77_002014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462239.1"
                     /note="This family includes YhcC from E. coli K-12, an
                     uncharacterized radical SAM protein; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01212 family radical SAM protein"
                     /protein_id="HCA3357553.1"
                     /translation="MQLQKLVNMFGGDLLRRYGQKVHKLTLHGGFSCPNRDGTIGRGG
                     CTFCNVASFADEAQQHHSIAEQLAHQAHLVNRAKRYLAYFQAYTSTFAEVQVLRSMYQ
                     QAVSQASIVGLCVGTRPDCVPQAVVDLLCEYKDQGYEVWLELGLQTAHDKTLRRINRG
                     HDFACYQRTTRIARERGLKVCAHLIVGLPGEGQAECLQTMERVVETGVDGIKLHPLHI
                     VKGSTMAKAWEAGRLNGIELDDYTLTAGEMIRHTPPEVIYHRISASARRPTLLAPLWC
                     ENRWTGMVELDKYLNEHGVQGSALARPWIPPVA"
     gene            15106..19566
                     /gene="gltB"
                     /locus_tag="MOX77_002015"
     CDS             15106..19566
                     /gene="gltB"
                     /locus_tag="MOX77_002015"
                     /EC_number="1.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001742510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase large subunit"
                     /protein_id="HCA3357554.1"
                     /translation="MLYDKSLEKDNCGFGLIAHIEGEPSHKVVRTAIHALARMQHRGA
                     ILADGKTGDGCGLLLQKPDRFFRIVAEERGWRLAKNYAVGMIFLNKDPELAAASRHIV
                     EEELQQETLSIVGWRDVPTNEGVLGEIALSSLPRIEQIFVNAPAGWRPRDMERRLFIA
                     RRRIEKRLQDDKDFYVCSLSNLVNIYKGLCMPADLPRFYLDLADLRLESAICLFHQRF
                     STNTVPRWPLAQPFRYLAHNGEINTITGNRQWARARTYKFQTPLIPDLQSAAPFVNET
                     GSDSSSLDNMLELLLAGGMDIIRAMRLLVPPAWQNNPDMDQDLRAFFDFNSMHMEPWD
                     GPAGIVMSDGRFAACNLDRNGLRPARYVITKDKLITCASEVGIWDYQPDEVVEKGRVG
                     PGELMVIDTRGGRILHSAETDDDLKSRHPYKAWMEKNVRRLVPFEELPDEEVGSRELD
                     DDLLASYQKQFNYSAEELDSVIRVLGENGQEAVGSMGDDTPFAVLSSQPRIIYDYFRQ
                     QFAQVTNPPIDPLREAHVMSLATSIGREMNVFCEAEGQAHRLSFKSPILLYSDFKQLT
                     TMSEHHYRADWLDITFDVTETTLDATVKALCDKAEQMVRNGTVLLVLSDRNIGKNRLP
                     VPAPMAVGAVQTRLVDQSLRCDANIIVETGSARDPHHFAVLLGFGATAIYPYLAYETL
                     GRLIDTQAIAKNYRTVMQNYRNGINKGLYKIMSKMGISTIASYRCSKLFEAVGLHDDV
                     VNLCFQGVVSRIGGASFDDFQQDLLNLSKRAWLARKPISPGGLLKYVHGGEYHAYNPD
                     VVRTLQQAVQSGEYSDYQEYAKLVNERPAATLRDLLAIHPDGEAVTIDEVEPASELFK
                     RFDTAAMSIGALSPEAHEALAEAMNSLGGNSNSGEGGEDPARYGTNKVSRIKQVASGR
                     FGVTPAYLVNADVIQIKVAQGAKPGEGGQLPGDKVTPYIAKLRYSVPGVTLISPPPHH
                     DIYSIEDLAQLIFDLKQVNPKAMISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGT
                     GASPLSSVKYAGCPWELGLVETQQALVANGLRHKIRLQVDGGLKTGVDIIKAAILGAE
                     SFGFGTGPMVALGCKYLRICHLNNCATGVATQDEKLRKNHYHGLPFKVTNYFEFIARE
                     VRELMASLGVTRLVDLIGRTDLLKELEGFTAKQQKLALSRLLETAEPHPGKALYCTEN
                     NPPFDNGVLNAQLLQQAKPFVDARQSKTFWFDIRNTDRSVGASLSGYIAQTHGDQGLA
                     SDPIKAHFSGTAGQSFGVWNAGGVELYLTGDANDYVGKGMAGGLIAIRPPVGSAFLSH
                     KASIIGNTCLYGATGGRLYAAGRAGERFGVRNSGAITVVEGIGDNGCEYMTGGIVCVL
                     GKTGVNFGAGMTGGFAYVLDEDGEFRKRVNPELVEVLDVDSLAIHEEHLRGLITEHVQ
                     HTGSQRGEEILSRWSSFSTQFALVKPKSSDVKALLGHRSRSAAELRVQAQ"
     gene            19576..20994
                     /gene="gltD"
                     /locus_tag="MOX77_002016"
     CDS             19576..20994
                     /gene="gltD"
                     /locus_tag="MOX77_002016"
                     /EC_number="1.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001540975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase subunit GltD"
                     /protein_id="HCA3357555.1"
                     /translation="MSQNVYQFIDLQRVDPPKKPLKLRKIEFVEIYEPFSEGQAKAQA
                     DRCLSCGNPYCEWKCPVHNYIPNWLKLANEGRIFEAAELSHQTNTLPEVCGRVCPQDR
                     LCEGSCTLHDEFGAVTIGNIERYINDKAFEMGWRPDMTGVRQTDKRVAIIGAGPAGLA
                     CADVLTRNGVKAVVFDRHPEIGGLLTFGIPAFKLEKEVMTRRREIFTGMGIEFKLNTE
                     VGRDVQLEDLLKDYDAVFLGVGTYQSMRGGLENEDADGVFDALPFLIANTKQIMGFGE
                     TSDEPYVSMEGKRVVVLGGGDTAMDCVRTSIRQGATHVTCAYRRDEENMPGSRREVKN
                     AREEGVEFQFNVQPLGIEVNANGKVSGVKMVRTEMGEPDAKGRRRAEIVAGSEHVVPA
                     DAVVMAFGFRPHSMEWLAKHSVELDSQGRIIAPERSDNAFQTSNPKIFAGGDIVRGSD
                     LVVTAIAEGRKAADGIMNYLEV"
     gene            21202..22305
                     /locus_tag="MOX77_002017"
     CDS             21202..22305
                     /locus_tag="MOX77_002017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1016 family protein"
                     /protein_id="HCA3357556.1"
                     /translation="MTNPTLAPQSDEYQQIHDGIIRLVDTARTETVRSINAIMTATYW
                     EIGRRIVEFEQGGEARAAYGTQLIERLSVDLSQRYKRGFSNRNLWQIRTFYLCFQHIE
                     IPQTLSAESSNLIPLAKTFPLPWSAYVRLLSVKDNDARTFYEKETLRNGWSVRQLDRQ
                     IATQFYERTLLSHDKSAMLQQPAPAEPNVLPEQAIRDPFILEFLNLKDEYSESDLEDA
                     LLSHLMDFMLELGDDFAFVGRQRRLRIDDSWFRVDLLFFHRRLRCLLLVDLKVGKFGY
                     ADAGQMNMYLNYAKEHWTMPGENPPVGLVLCAGKGAGEAHYALTGLPNTIMASEYKVQ
                     LPDEKLLTDELIRSQTMLETQLTRGGSLTTEKN"
     gene            22422..23675
                     /gene="codB"
                     /locus_tag="MOX77_002018"
     CDS             22422..23675
                     /gene="codB"
                     /locus_tag="MOX77_002018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytosine permease"
                     /protein_id="HCA3357557.1"
                     /translation="MSQDNNYSQGPVPQAARKGVIPLTFVMLGLTFFSASMWTGGTLG
                     TGLTYHDFFLAVFFGNLLLGIYTAFLGYIGAKTGLSTHLLARYSFGVKGSWLPSLLLG
                     STQVGWFGVGVAMFAIPVSKATGIDANILIAVSGLLMTLTIFFGISALTILSIVAVPA
                     IVILGSYSVWLAVSGVGGLEHLKTIVPQTPLDFSSALALVVGSFVSAGTLTADFVRFG
                     RHAKSAVLIAMVAFFLGNSLMFIFGAAGAAAVGQADISDVMIAQGLLLPAIVVLGLNI
                     WTTNDNALYASGLGFANITGLSSRTLSVVNGIIGTVCALWLYNNFVGWLTFLSSAIPP
                     IGGVIIADYLVNRRRYADFNTVRFIPVNWIAILSVALGIAAGHYVPGIVPVNAVLGGV
                     FSYILLNPLFNRSLAKSPEVSHAEQ"
     gene            23662..24942
                     /locus_tag="MOX77_002019"
     CDS             23662..24942
                     /locus_tag="MOX77_002019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytosine deaminase"
                     /protein_id="HCA3357558.1"
                     /translation="MQNNNITIRQTRLQGHEGLWQITIENGRFSRIEPQEATSLPQGE
                     VLDAEGGLAIPPFVEPHIHLDTTQTAGEPSWNQSGTLFEGIERWAERKAMLTHEDVKA
                     RAMQTLKWQMANGIQYVRTHVDVSDPTLTALKAMLEVKQEVAPWVDLQIVAFPQEGIL
                     SYPNGEALLEEAVRLGADVIGAIPHFEFTREYGVESLHKTFALAQKYDRLIDVHCDEI
                     DDEQSRFVETVAALAHRDGMGARVTASHTTAMHSYNGAYASRLFRLLKMSGINFVANP
                     LVNIHLQGRFDTYPKRRGVTRVKEMLEAGINVCFGHDDVFDPWYPLGTANMLQVLHMG
                     LHVCQLMGYGQINDGLNLITTHSAKTLHLQDYGLSVGNAANLVILPAENGFDAVRRQT
                     PARYSIRHRRVIAETVPSQTTLHLTQPEAVTFKR"
     gene            complement(25024..25491)
                     /locus_tag="MOX77_002020"
     CDS             complement(25024..25491)
                     /locus_tag="MOX77_002020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhcH/YjgK/YiaL family protein"
                     /protein_id="HCA3357559.1"
                     /translation="MMMGEVQSLPSCGLHPRLLDALTLALAARPQEKAPGRYELQGDN
                     IFMNVMQLTTQMPAGKKAELHEQYIDIQLLLTGVERIAFGMSGAARQCEEMHVEEDYQ
                     LCSQIADEQTITLQAGMFAVFMPGEPHKPGCAVGEPDDIKKVVVKVRASLLAA"
     gene            complement(25488..>25840)
                     /gene="nanK"
                     /locus_tag="MOX77_002021"
     CDS             complement(25488..>25840)
                     /gene="nanK"
                     /locus_tag="MOX77_002021"
                     /EC_number="2.7.1.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="N-acetylmannosamine kinase"
                     /protein_id="HCA3357560.1"
                     /translation="AIASGRGMAAAARDDLAGCDAKTLFIRAGEGHQQARHLVSQSAQ
                     VIARMIADVKAITDCQCVVIGGSVGLAEGYLEQVRAFLMQEPEPYHVALSAARYRHDA
                     GLLGAALLAQGDTL"
BASE COUNT         5942 a         7135 c         6878 g         5885 t
ORIGIN      
        1 aaattggtgt gctcccgtag cggataggcc acattgtcaa acacgttcat gtcggtaaac
       61 agcgctcccg actgaaacag catactcata cgtttacgga cggtgtagag ccgcgaacgg
      121 gacatggccg gcacattctc gccatcaaat aagatctcgc ccttatccgg cgggatctgt
      181 ccgccaatca ggcgcaacag cgtggtttta ccgatgcccg acggccccat gatcgccgtg
      241 atcttcccgc gcggcaccgt cagggaaata ttatcgaaaa tgcagcgttc gccacggcaa
      301 aagctgacgt cgcgcatatc gactaaattg gccgcagact gacccattga ttcatccttc
      361 gtattgcctt gttgaggtaa ccatggcgct gaatttaacc atgggttcga cataattaca
      421 gaatattaac tgacagggtt agcgaaagct ggcattcgtt ttacttttta gccgcataaa
      481 gtcaaaatta ggacttcgtt acggcttcca gatatccctt ccaggggacc ggcgagtata
      541 cctgaagaaa ggactttaga tgcttttagc gatggcgcta ctcataattg gtttgcttct
      601 ggtggcctac ggcgccgatc gtctggtgtt tgcggcctct attttatgcc gtacattcgg
      661 tattcccccg ctgatcatcg ggatgacggt cgtgagtatc ggcacctcgc tgccggaaat
      721 tattgtgtcg gtcgccgcat cgctacacgg tcagctcgat ttggccgtcg gcgcggcgct
      781 cggttctaac atcaccaata ttttgctgat cttagggctg gcggcgctgg ttcgtccatt
      841 taccgtgcat tccgatgttc tacgtcgcga attgccatta atgttatttg ttagcgtggt
      901 agccggttcc gtactgcatg acggacagtt aagtcgcagt gatggtatct ttctcctgct
      961 tctggctgtg ctatggctgt tattcattgt taaaatcgcg cgtctggccg aacgccaggg
     1021 gaatgacagc ctcacccgcg aacaactggc ggagctgccg cgcgaagacg ggctccccgt
     1081 cgcgttctta tggctgggca ttgcgctggt catcatgccg atggcgacgc gcatggtaat
     1141 cgataacgct acggtgctgg cgaactattt cgccatgagt gaattaacgc tcggtctgac
     1201 agtcatcgcc gtcggcacca gtctgccaga actggcgacg gcgattgccg gcgtgcgaaa
     1261 aggcgaaaat gatattgccg ttggtaatct cattggcgcc aatattttta atctcgccat
     1321 cgtgctggga ctgcctgcgc tgatcgcgcc gggggagatc aacccgctgg cgtttgggcg
     1381 tgattatagc gtgatgttgc tggttagcgt ggttttcgct ttactttgct ggcggcatcc
     1441 gcgccagatt ggccggggcg caggtatact gctgaccggc gggtttatcg tatggctggc
     1501 gatgctctat tggctatcgc cacttcttgt tggataactg gaaacggatt atgtcgcatt
     1561 tagcgttgca accggggttt gactttcagc aggcaggcaa agaggtcctg gaaattgaac
     1621 gtgaaggcct ggcggagctt gatcaatata tcaaccagca tttcacgctg gcctgtgaaa
     1681 aaatgttcaa ctgcaccgga aaagtggtgg tcatggggat ggggaaatcc ggccatatcg
     1741 gacggaaaat ggccgccacg ttcgccagta ccggcacctc ttcctttttt gtacatccag
     1801 gcgaagccgc gcacggcgat ttggggatgg ttacgccgca ggatgtggtt atcgctatct
     1861 ccaactccgg cgaatccagc gagatcgcgg cgctaatacc ggtgcttaaa cggctgcacg
     1921 taccgttaat ttgcattacc gggcgaccgg aaagcagcat ggcgcgtgcg gcagatgtgc
     1981 atctatgtgt taaagtgccc aaagaagcgt gtccgttagg cctggcgcct accagtagta
     2041 ccaccgcaac gctggtgatg ggcgacgcgc tcgccgtggc gttgttaaaa gcgcgcggct
     2101 ttaccgccga ggatttcgct ctgtcgcatc ctggcggcgc gctgggacgt aagctactgc
     2161 tgcgcgtaag cgatattatg catactggcg atgagatccc gcatgttaat aaacatgcca
     2221 ccctgcgtga tgcgctgtta gaaattacgc gtaaaaatct cggtatgacc gtcatttgcg
     2281 atgaatccat gaagatcgac ggtatcttca ccgacggcga tttacgtcgc atgttcgata
     2341 tgggcggcga tatgcgccag ttggggatcg ccgaggtgat gacgccaggg ggcattcgcg
     2401 tgcgtcccgg tattctcgct gtcgatgcgc tgaatttaat gcagtcccgc catatcacct
     2461 ccgtactggt tgctgatggc gaccagttac tcggtgtgtt acatatgcat gatctcctgc
     2521 gtgcaggcgt cgtgtagaaa ctcaaggata attaacgatg agtaaagcag gtgcgtcgct
     2581 tgcgacctgt tatggccccg tcagcaccca tgtcatgacc aaagcggaga atatccgcct
     2641 gctcatcctg gacgtggatg gcgtattgtc tgacggcctg atttatatgg gcaataacgg
     2701 cgaagagctg aaggctttca acgttcgtga cggctatggt attcgctgtg ctttgacctc
     2761 caatatcgag gttgccatta ttaccggacg aaaggctaaa cttgtagaag atcgctgcgc
     2821 cacgctgggg attgtccatc tttatcaggg acagtcgaat aagctgatcg cctttagcga
     2881 tctgctggaa aaactggcca ttgcgccgga aaatgttgcc tatgtcggcg atgatctgat
     2941 tgactggcca gtgatggaaa aagtggggtt aagcgttgcc gttgcggatg cgcatccgct
     3001 gctgatcccc cgcgctgact atgtgacgca cattgccggc gggcgcggcg cggtacgtga
     3061 ggtgtgcgat ttgctgctgc tggcgcaggg caagctggat gaggccaaag ggcaatcgat
     3121 atgagtaaaa ccagacgttg ggttatcatt ctactgtcgc tggctattct ggtactgatt
     3181 ggtatcaatc tggcggataa agacgatcct gctgccgtga tggtcaacag caacgatccc
     3241 acgtataaaa gcgagcacac ggataccgtc gtgtacagtc cggaaggcgc gttgagctat
     3301 cgtctgatcg cgcagcacgt tgaatatttt tccgatcagg cggtctcatg gtttacgcaa
     3361 ccggtattaa ccacctttga taaggataaa gtgccgacat ggtcgatcaa ggccgataaa
     3421 gccaaattga ctaacgatcg gatgctctat ctgtatggcc atgttgaagt caacgccctg
     3481 gtgcctgacg ctcaattacg cagaattacc accgataacg cgcagattaa tctggtgacg
     3541 caggatgtta cctcgaacga tctggtgacg ttatacggca caacatttaa ctccagcgga
     3601 ctgaaaatgc gcggtaactt acgcagcaag aacgccgagc tgattgaaaa ggttagaacc
     3661 tcttatgaaa ttcaaaacaa acaaactcag ccttaatctt atgcttgccg gctcgctgct
     3721 ggccgccagc attccggcct tcgccgtcac gggcgatacc gaacagccta ttcatattga
     3781 ctcggatcaa cagtcactgg atatgcaagg caacgtcgtg acctttacgg gcaacgtggt
     3841 aatgacccag ggcacgatta agatcaacgc cgataaagtc gtggttaccc gccctggcgg
     3901 cgaacagggg aaagaggtga tcgacggtta cggcaatccg gccaccttct accagatgca
     3961 ggacaacggt aagccggtga aaggccacgc ttcccatatg cattacgagc tggcgaaaga
     4021 ttttgtggtg ctgaccggca acgcttatct ggagcagctt gacagcaaca ttaccggcga
     4081 caaaatcacc tacctggtga aagagcagaa aatgcaggcc ttcagcgaga aaggcaaacg
     4141 cgtcaccacc gttctggtgc cgtcgcagtt gcaagacaaa aacaaaggcc agactccggc
     4201 gcaaaagaag agtaactaat tcgttatggc aacattaact gcaaagaatc tggcgaaggc
     4261 ctataaaggc cgtcgcgtag tggaagatgt cagtctgacc gttaactccg gggagattgt
     4321 cgggctgctc ggtccaaacg gcgcgggtaa aaccaccacc ttttatatgg tcgtcggtat
     4381 cgtgccgcgt gacgcgggca atatcatcat cgatgatgaa gatatcagtc tgctgccgct
     4441 gcacgcgcgc gcgcgccgcg gtatcggcta tttgccgcag gaagcctcta ttttccgccg
     4501 tctcagcgta tttgataacc tgatggcggt actgcaaatt cgtgacgatt tgaccgcaga
     4561 acagcgagaa gaccgcgcca acgagctgat ggaagagttt catatcgagc atctgcgcga
     4621 cagcatggga caggcgctgt ccggtggtga acgccgtcgt gtagaaatag cccgcgcgtt
     4681 ggccgctaat cccaaattta tcctgctgga tgaacccttt gccggcgtcg acccgatttc
     4741 cgttatcgac ataaaacgca ttatcgagca tctgcgcgat agtgggctcg gcgtgctgat
     4801 caccgaccat aacgtccgtg agacgctggc agtctgtgaa cgtgcctata tcgtgagcca
     4861 gggccacctt attgcccacg gtacgccgac agaaatcctg caagacgaac acgttaagcg
     4921 tgtatatctt ggggaagact tcagactctg atagggtaga gggctatgct gctctagcgg
     4981 gagaaaacga ctctgaatat gaagcaaggt ttgcaactca ggcttagcca acaactggcg
     5041 atgacgcctc agctacaaca ggccatccgt ctgttgcagt tgtctacgct ggaacttcag
     5101 caggaactcc agcaagcgct ggaaaataac ccgctgcttg agcaaaccga tcttcatgac
     5161 gaaatcgaca ctcagcaacc tcaggatgac gatcctctcg ataccgccga cgcgctcgaa
     5221 caaaaagaga tgccggaaga gctgccgctt gacgccagtt gggatgaaat ttacaccgcc
     5281 gggacgccgt ccggccccag cggcgattat atcgacgatg agctgcccgt ctatcagggc
     5341 gaaacgacgc agtcgttgca ggattatctg atgtggcagg ttgagctaac gcccttctcg
     5401 gacaccgatc gcgctattgc gacatccatt gtcgacgcgg tagatgatac cggctatctc
     5461 accgtatccc tggacgaaat tcgcgaaagc atgggcgatg tagaggtgga tctcgatgag
     5521 gtcgaagccg tcctgaagcg tattcagcgt tttgatccgg taggcgtcgc ggcaaaagat
     5581 cttcgcgact gtctgctgat ccagctttca caattcgaca aatccacgcc gtggctggaa
     5641 gaggcgcggc ttattatctg cgatcacctt gatctgctgg ccaaccacga tttccgcacg
     5701 ttgatgcgcg ttacccgact aaaagaagag gtgctgaaag aggcggtaaa cctgattcag
     5761 tcgctcgatc ccagacccgg tcaatcgatc cagaccggcg agccggagta cgttatcccg
     5821 gatgtgctgg tacgcaagca taacggtcgc tggacggtgg agcttaatag cgacagtatt
     5881 ccccgtttac agattaacca gcactatgcc gccatgtgca atagcgcgcg caacgatgcc
     5941 gacagccagt tcatccgcag taatttacag gatgcgaaat ggctgataaa aagccttgaa
     6001 agccgtaacg acacgctgct gcgcgtcagt cgctgcatcg tcgagcaaca gcaagccttt
     6061 tttgaacagg gcgaagaata tatgaaaccg atggtactgg cggatatcgc ccaggccgtc
     6121 gagatgcacg aatccactat atcccgcgtg accacgcaga agtatttgca cagcccgcgc
     6181 ggtatttttg aactcaaata tttcttttcc agccacgtca ataccgaagg cggaggcgaa
     6241 gcctcttcca ccgcgattcg cgcgctggtg aagaagttaa ttgcggcgga aaaccccgcg
     6301 aaaccactga gcgacagcaa gttaacctct ctgctgtcag aacaaggtat catggtggca
     6361 cgccgcactg ttgcgaagta ccgagagtct ttatccattc cgccgtcaaa ccaacgcaaa
     6421 cagctggttt gacccaaccg ataaggaaga cactatgcag ctcaatatca ccggacataa
     6481 cgtcgaaatt actgaagccc tgcgtgaatt tgtgacgacg aaattcgcca aacttgaaca
     6541 gtattttgag cggattaatc aggtatacgt ggtgttgaaa gtggagaagg tcacgcacat
     6601 ctcggatgcg acgctacacg ttaacggcgg cgaaattcac gccagcgcgg aaggccagga
     6661 tatgtatgcc gccattgacg gcttgattga taaactggca aggcagttaa ccaagcataa
     6721 agataaactg aaacaatact aattgtccgg gcagttagcc agtgcaggac ggcctgttgt
     6781 gtgacacaac gggccatttg tacagttagc gctccgaacc tggccatcaa cctgacagga
     6841 caggttctta ggtgaaatta tgataaataa cgatacgact ctacaactga gcagtgtact
     6901 taaccaggag tgtacgcgta gcggcgttca ttgtcagagt aagaaacgcg cgctggaaat
     6961 catcagcgaa ctggcggcaa aacagctcag tttacctcct caggtcgtgt ttgaagccat
     7021 tctgacacgc gaaaaaatgg gcagtaccgg tattggtaat ggtatcgcca tcccgcacgg
     7081 gaaactggaa gaagatacct tacgcgccgt cggcgtgttc gttcagctcg aaacgccgat
     7141 cgcgttcgac gccatcgata accagccggt cgatctcctc ttcgctctgc tggtgcccgc
     7201 cgatcaaact aaaacgcatc tgcacacgct gtcgctggtg gcgaaacgtc tggcggataa
     7261 aacgatctgc cgccgcctgc gcgcggcgct gaatgatgaa gagctgtatc aaatcattac
     7321 tgacaccgaa ggtgagcaga atgaggcata acaactcaat ggcatttatt tctgtcgttg
     7381 tgaggagaaa cggtacatgg tactgatgat cgtcagcggg cgttccggat caggtaaatc
     7441 tgtcgctctg cgcgcgctgg aagatatggg attttactgc gtggataacc tccccgtcgt
     7501 gctgttgccc gatctggcgc gaacgctggc cgatcgccag atttccgccg ccgtcagcat
     7561 tgatgtgcgc aatatacctg aatcacctga gatttttgaa caggcgatga ataatctgcc
     7621 tggcgctttc tcgccgcaat tgctgtttct tgatgccgac cgcaatacct tgattcgccg
     7681 ctacagcgac acgcgccgtt tgcatccgct ttccagcaaa aatctttctt tggagagtgc
     7741 gatcgataaa gagagtgact tgctggagcc gttacgctca cgtgcggatc tgatcgtcga
     7801 cacttcagaa atgtccgtcc atgagctggc ggagatgctg cgtacccggc tattgggcaa
     7861 acgcgagcgc gaactgacga tggtatttga gtccttcggc tttaaacatg gtatcccgat
     7921 tgatgcggac tatgtgtttg atgtccgctt tctgcccaac ccacactggg acccaaaact
     7981 gcgccccatg accgggcttg ataagccggt agccgcgttt cttgaccgac acacagaagt
     8041 tcacaatttt atctatcaga ctcgcagcta tcttgagcta tggttaccga tgctggagac
     8101 caacaaccgc agctacctta ccgtcgctat cggttgtacc ggcgggaaac accgttcggt
     8161 gtatattgca gaacagctgg cagactactt ccgctcgcgc ggtaaaaatg tccagtctcg
     8221 ccatcgcacg ctggaaaaac gcaaaacatg accgtaaagc aaactgttga agtcaccaat
     8281 aagctgggca tgcatgcccg gcctgccatg aagcttttcg aactgatgca gggttttgac
     8341 gccgaggtgc tattacgcaa tgacgaaggc accgaagcgg aagcaaacag cgtcatcgct
     8401 ctgttaatgc tcgactccgc caaagggcgt cagatcgaaa ttgaagccac cggcccgcaa
     8461 gaagttgaag cgctggcggc ggttatcgcg ctgttcaatt ccggctttga cgaagactaa
     8521 acctccccct ctatacccta tttaccccaa cgccgtcccg gtatttgatg gcagtccccc
     8581 caaaaccgga cgtgttacgc ctgcctcttg tcccgcagcc ccaccctttc gtaaggtttg
     8641 tacatttcgt gcgctttaat tatgcataaa aacattaaga aaaccttaaa aaatttcgtt
     8701 taggttttat ttaagttctt tgtccatact aaatttatgt gaataaattt ttccaggact
     8761 tgccatgatc cttttatcca aacagactcc gctgggcgct ggtcgacatc gtaaatgcta
     8821 tacgcatccg gataatgccc ggcgttgcat aaaagttatt tacaaccgtg accacggcgg
     8881 tgataaagag attcggcgtg aactgagcta ctatgcgcat ctgtcccgct acctgacgga
     8941 ctggagcgct atcccccgtt attacggcac ggtagaaacc gattgcggca ccggctatgt
     9001 ctacgacatg attaccgatt tcaacggcgc gccctctatt accctgaccg agttcgccgc
     9061 gcaatgtcgt tatgaagagg atgtcgctgt cctgcggcgg ctactgaaaa aactgaaacg
     9121 ttacctgctg gataaccata ttgtgacgat gtcgctgaag ccgcaaaata tcctgtgcca
     9181 gcgtatcagc gagtcagaag tggttccggt ggtttgcgac aatctggggg aaagtacctt
     9241 tatcccgctg gcgacctggt caacatggtg ctgtgaacgc aaactggaga gagtgtggca
     9301 gcggtttatc gcccagcctg cgctggccgt tgccctggag agggacgcgc agccaaaaga
     9361 caagaaacgg ctggcgctta cttctcacga agcttaatgg cctgtgctta tcaggcctgg
     9421 acgacacaga tcgcaggccg gataaggcgt tcgcgccgcc aatcggcaaa attaattaag
     9481 ctggttgcgc gtcataaaag attccccgcc cagttggcgc atctggcgca taatccacgc
     9541 ctgccggcta cgcacatagc cagaaggcgc attcgcctta tagcgtaacg gatttggcaa
     9601 taccgccgcc agcaacgcgg cttcagacac actcaagcga ctggcaggtt tatgaaaata
     9661 ccgttgtgcc gcagcctcca cgccaaaaat accatcgcca aactccgcga tattcagata
     9721 aaccgtgagg atgcgctttt tgctccagac agtttcaatg cccagcgtta gcccggcctc
     9781 cagacctttg cgcacccaac tgcgtccatc ccataaaaag agatttttcg ccgtttgctg
     9841 cgaaagcgta gaggcgccgc gaatacggct ctcattccgc tcattatgcg ccagcgcttt
     9901 ttcaatcgcc ggaacatcaa agccccagtg ctcagggaac ttctggtctt ccgccgcaat
     9961 taccgccagc cccatccacg gcgagatatc cgccatactg acccagtcag aatgcgccac
    10021 ataaccgaac tctccgccga gccaggcgct aatctgccgt tccgccatca ccgccgaaaa
    10081 aggcaccgga accacgctaa acagcgcaat gccgccgccc caaaagacgg cgagcgcagc
    10141 aaggatacgt aaaagtagac ggcgcaaaaa cgttaacggc gcgatgcgtc gtttgctcat
    10201 tccgccagaa ccagcacgcg cgacactaat ttatcaatgc cgcttgccgc ctgggcgata
    10261 tcctgcgcca gcatataggc aggggtggtc acgaccttgt tatcctcgtc cacaacgata
    10321 tcatcaaccg ggcaaggtac gtgttcggcc cccatctctt caagtacttc agcggtatca
    10381 atatccgtcc ctattgtcag acgtagcggg aagtcaaaga ttttcggcaa cattgcgggc
    10441 gcgatacaga tgaatcccag cggcttgccg gactggtgca tggccttcgc cagcgcgacg
    10501 acatcgctat ccacccggca ttcgctcccc ttgctggcga aattactcag gttcttcgcc
    10561 gcgccgaaac caccaggcac aatgagcgca tccagttcct ctggctgagc ctgggacaga
    10621 ggacgaatat cgccccgcgt aatacgcgcc gcctcaatca ggacgttacg cgtttccgcc
    10681 atagcttcgc cggtcaggtg attaataaca tccgcttgtg gtttatccgg cgcgaagcag
    10741 atagcctgcg cgccgctgcg ggcaatggcc aacagcgtca gaacggcctc atgaatttcg
    10801 gtgccgtcat agacgccgca tccgctgagc actacgccaa tttttttcat ggtgaacatc
    10861 ctcctgcaac cgactcaagc ccattaataa ttttgattaa aatgctacgc ttcacacatt
    10921 taaatgattc atgtaacaaa tcatttagga tttgctatct taactgcgtg cggcctgaaa
    10981 acaggactgc gcctttgaca tcatcataat aagcacggcg cagccacgat ttccctggtg
    11041 ttggcgcagt attcgcgcac cccggtcaaa ccggggtcat tttttttccg cgtttgccac
    11101 ccaggctttc agcaccgcga catcgtgctg ccactcctgc ttcatctctt caatccattc
    11161 cacgacatta tcttcccagg cgggaagatc cggcgactgg atttgctggc caagttgttg
    11221 cagatgacgc agccctaccg aaccggcggc gcctttaatc ttatgccctt cctcaacgac
    11281 gccttttttg tcacgcgccg tcagattgga ctccagcacg cttaaatagc caagcatcat
    11341 tttttcaaac accgcgaggc cgtcggtgat caatttaggc ccaaccaact cgatgtattg
    11401 ttccagcatc gggatatcca gcagcgcttg cgctttatcg ctctcttcag gcgtcacggt
    11461 actctcctct ttatcggtgg catcccagaa ttttttaatc atcgcggtta aggctggcac
    11521 cgacagcggc ttactcagca catcgtccat accagcgtcc agatactctt ttttatcttt
    11581 cagaacgtta gccgtaagcg ctaccagcgg cggtaaatct tcccgcgtgt ggcgacgggt
    11641 cagttctctg gcaatatcca gacccgtcat atccggtagc tgaatatcca gtaagaccag
    11701 gtcatattcg cctggcgcga acatctccag cgccgccttg ccggtcatcg cgacatccac
    11761 gctgttcccc agtttttcca gtactgaacg cgccacaatc acgttcagtt caatatcttc
    11821 gaccagcaga acatgcagcg cgggcagcgg catgtcgtct tcatcaaagg cgtcctccac
    11881 ctcttccgcc accgctggcg catgaaccgt tagcgtaaag gtcgatcctt tgcccggcag
    11941 actggaaacg gtaatatcgc cgcccatatt tttcgccagc cgacgggaga ccgccagccc
    12001 gataccggtc cccgtcgccg gcttaccgcc atgactgtct tttacctgat aatacatggc
    12061 gaaaatttta tcctgctcat cctgcggaat gccgatcccg gaatcttcca cttcaaagtg
    12121 cagcatgtcg ccttcatcat agcgcgcccg caccgtcacc tggccctgct gagtaaactt
    12181 caccgcattg ctgatcaaat tccataaaat ctggcgcaga cgcgttccgt cggtaatgac
    12241 tttgtgcggc agcggcagcg tcggctcaag cacaaaacgt agcccttttt gctgcgcctg
    12301 caaaccggaa aggttttcca gatcggccat aaagctggtg aaatcaaccg gttggttatc
    12361 aagctgaacc ttacgccgct ccatcttatc catatcaatg atatcattga aaatattgcc
    12421 taacgtcacg gcggagacat ggattgtctt aaggtatttt tcctgttcgg cggtaagatc
    12481 ggtatccagc aggatgcggc ttaaaccgac gataccgtta agcggggtgc gcagctcatg
    12541 actgatggta gagataaatg tggtcttgtc gcgactggcg cgctccagcg cgtcctgata
    12601 acgcttacgt tcggtaatat cacgaccaaa tcccatcagg ccatgacgtt taccgacacg
    12661 gtcgtaataa ggcactttac gaatttcaaa gcaggccttt cgtccgtccg gataatccag
    12721 ccactgttcg taggtcaggg agacgttatg gcggaatact ttttcatcgg tttcaatgac
    12781 tttctccgcc gcttcgggag agtacacatc ttccggcttc aaatgcacca gctgtttttc
    12841 gctcttgccg gttagcaatt ccattgcgcg gttacagccg gaaaactctt tatcctcatt
    12901 acgataaaaa accaaatccg gcgaggcgtc cagaaaggag cgcagaaaag aggattgctg
    12961 ttctagctgg atttgcgcct cttcacgctc tttaatttct acttttagct gttcaaatgt
    13021 ctcttgcagc tccgcttccg ctttttcgcg atcggcaatt tcctgattaa gctgggcaat
    13081 attgtccttc aactgtacgt taagcttgag atcgcgctcg cgcatctcct ccagcttttg
    13141 caccagacgc gacagtcgct gccttgactc ttccagttgt tcaacaacaa cggataagaa
    13201 atagaccgcc cagggcgtaa ttaacaggcc aaaaaagatg gaacgaataa cgtcgatact
    13261 ttcaacctga ccatgcagca ccatggtcac cgccatctgc acgacaatcg ccagcaccac
    13321 caatgccaac gccaggagca tggaaaagcg caccagaccc aatttcatca tcaggtcgac
    13381 atagtattgc gccagcatac gaatttgctt catagaggat tccttcacca caacttcgca
    13441 cataataccc aattatggga accgcgttga atattgtgcg aaatatgcgt agccccctca
    13501 tcacgctacg ctacaggtgg tatccaggga cgggccagcg cagagccctg cacgccatgc
    13561 tcattcaggt atttgtccag ctcaaccatc cccgtccagc gattctcgca ccacagcggg
    13621 gcaagcagcg tcggacggcg agcgctggct gaaattcggt gataaattac ctccggcggc
    13681 gtatgacgaa tcatctcacc tgccgttagc gtgtagtcgt ccagttcgat gccgttcagc
    13741 cgccccgctt cccaggcttt ggccatcgta ctgcctttca caatatgcag cggatgcagt
    13801 ttaataccgt caacgcccgt ctccaccaca cgctccatgg tttgcaggca ttctgcctgc
    13861 ccttctcccg gcagccccac aatcagatgc gcgcacactt tcagcccgcg ctcccgggca
    13921 atccgggtgg tacgctgata gcaggcgaag tcatgcccgc ggttaattcg gcgcagggtt
    13981 ttatcgtgcg cggtttgcaa tcccagttcc agccacacct cgtagccttg atctttatat
    14041 tcacacagta aatctactac tgcctgcggg acgcaatccg gacgcgtacc gacgcataac
    14101 ccgacgatac tggcctggct gaccgcctgt tgatacatgg aacgcagcac ctgcacttct
    14161 gcaaaggtgc tggtgtaggc ctggaaatag gccagatagc gtttagcgcg gttcaccaga
    14221 tgcgcctgat gcgcaagctg ctcggcaatc gaatgatgct gctgcgcctc atcggcaaaa
    14281 gaggcgacat tacagaaggt gcaaccgcca cgcccgatgg tgccgtcgcg attagggcag
    14341 ctaaaaccgc catgaagcgt cagcttatga accttttgcc cataccgacg taaaagatcc
    14401 ccaccaaaca tattgactaa tttctgtaac tgcataatct gatagaccgc ctcttaaaaa
    14461 gaggccaaag cctgccattt ttagtctcct ttggcgatga cctggatcaa tcgtcccgga
    14521 aggcttttat ccattgcata atcaagcaaa ataaacgata tttcattcat aatcccgctg
    14581 atgatttttc ctgatattcc cctctttttt cagcgtctgc tgggtcatcg ataaaaacag
    14641 tagcattcaa tgctgttcac gcttaaaaca gcataaaatg ccaagatttt tgaaaaagca
    14701 aggtcagata actcctggcg agcggctctt atagtgagac agatcacagg ctttctgccg
    14761 ctccgtatta gcaaccactc tataaaaaac cttttaattt caatagatta aaaagttatc
    14821 tgtgctacag cacacttttg cataaatcag tttgccattt gacctgggtg tggattcccg
    14881 ataagttggg gatccgctgg aagctttctg gatgagccgt ctgctcatca tatttatgca
    14941 gtaattgaga ttccctctta accgtattta ccaatgcgca aaggacacaa agagggcgaa
    15001 tgcgaggtaa gcgtatgatg cgccagcccc gtcgccatgc tcttgctgtg cccgcgcgcc
    15061 gtcggttggg agagcgtccc gtagagcctg gggaggttca ctgatatgtt gtacgataaa
    15121 tcccttgaga aggataactg tggtttcggc ctgatcgccc acatagaagg cgaacctagc
    15181 cacaaggtag tgcgtaccgc catacacgcg ctggcccgga tgcagcaccg tggcgcgatc
    15241 cttgccgacg gtaaaaccgg cgacggttgc ggcttgctgt tacaaaaacc tgaccgtttc
    15301 tttcgcatcg tggccgaaga gcgcggctgg cgcttagcca aaaactacgc cgtcgggatg
    15361 atctttttga ataaagatcc tgaactggcc gccgcgtcac gccatattgt cgaagaagaa
    15421 ttacagcagg aaaccctgtc gattgtcggc tggcgcgatg tgccaaccaa tgaaggcgtg
    15481 ctcggtgaaa tcgccctctc ctccctgccg cgtattgagc agatttttgt caacgctccg
    15541 gcgggctggc gtccgcgcga tatggagcgc cgtctgttta tcgcccgccg acgcattgaa
    15601 aaacgtctgc aggacgacaa agatttctac gtatgcagcc tgtcgaacct ggtcaacatt
    15661 tataaaggtc tgtgtatgcc ggcggatctg ccgcgcttct acctggatct tgcggatctg
    15721 cgtctggaat cggccatctg cctgttccac cagcgctttt ccactaacac cgtgccgcgt
    15781 tggccgctgg cgcagccgtt ccgctacctg gcgcataacg gcgagattaa caccatcacc
    15841 ggcaaccgcc agtgggcgcg cgcccgtacc tataaattcc agacgccgct gatcccggat
    15901 ttacaatccg ctgcgccgtt tgttaacgaa accggttcgg attccagctc gctggacaac
    15961 atgctggaac tgctgctggc aggcgggatg gacattatcc gcgccatgcg cctgttggtg
    16021 ccgcccgcct ggcagaacaa ccccgatatg gaccaggatc tgcgcgcctt ctttgacttt
    16081 aactccatgc atatggagcc gtgggacggt ccggcaggca tcgtgatgtc cgacgggcgc
    16141 ttcgccgcct gtaaccttga ccgtaacggc ctgcgcccgg cacgctatgt cattaccaaa
    16201 gataagctga tcacctgcgc ctccgaagtc ggtatctggg actatcagcc ggatgaagtg
    16261 gtcgagaaag gccgcgtcgg cccaggcgag ctgatggtga tcgacacccg cggcggacgt
    16321 attctgcatt ccgcggaaac cgatgacgat ctgaaaagcc gccatccgta taaagcgtgg
    16381 atggaaaaga atgttcgccg tctggtgccg tttgaagagt tgccagatga agaagtcggt
    16441 agccgcgaac tggacgatga cctgctcgcc agctatcaga aacagtttaa ctacagcgcc
    16501 gaagagctgg actccgttat ccgcgtgttg ggcgaaaacg gccaggaagc cgtcggttca
    16561 atgggcgacg ataccccctt tgccgtgctc tccagccagc cgcgtattat ttacgactac
    16621 ttccgccagc agttcgcgca ggttactaac ccgcctatcg acccgctgcg ggaagcgcac
    16681 gtcatgtcgc tcgccaccag catcggtcgc gaaatgaacg tcttctgcga agcggaaggt
    16741 caggcccatc gcctgagttt taaatcgcca attctgctgt actccgattt caaacagctc
    16801 accaccatga gcgagcatca ctaccgcgcc gactggcttg acattacctt tgatgtcacc
    16861 gaaaccacac tggacgcgac ggttaaggcg ctgtgcgata aagcggaaca gatggtgcgc
    16921 aacggcaccg tgctgctggt cctctcggat cgcaatatcg gtaagaatcg cctgccggtc
    16981 cccgcgccga tggcggtggg cgcggtgcag actcgtctgg tcgatcaaag cctgcgctgc
    17041 gacgccaaca tcatcgtaga aaccggaagc gcccgcgatc cgcatcactt tgcggtactg
    17101 ctcggctttg gcgcaacggc catctatccg tacctggcct acgaaacgct ggggcgtctg
    17161 attgataccc aggccatcgc taaaaactac cgtaccgtga tgcagaacta ccgtaacggc
    17221 atcaacaagg ggctgtacaa gattatgtcc aaaatgggca tttcgaccat tgcctcttac
    17281 cgctgctcca aactgtttga agcggtcggg ctgcacgatg atgtggtaaa cctgtgcttc
    17341 cagggcgtgg tcagccgtat cggcggcgcg agctttgatg acttccagca ggatctgctg
    17401 aatctctcca aacgcgcctg gctggcgcgc aaacccatta gcccgggcgg cctgctgaag
    17461 tacgtccacg gcggcgaata tcacgcctat aacccggatg tcgtgcgtac cctgcaacag
    17521 gcggtacaga gcggcgagta cagcgattat caggaatacg ccaaactggt caatgagcgt
    17581 ccggctgcaa cgctgcgcga tctgctggcg atacatccag acggcgaggc ggtgactatc
    17641 gacgaggttg agcccgccag tgagctgttt aaacgctttg ataccgcagc catgtctatc
    17701 ggcgcattaa gtccggaagc gcacgaagcg ctggcggaag cgatgaacag cctcggcggc
    17761 aactccaact ccggcgaagg cggcgaagac ccggcgcgct acggcaccaa taaagtgtcg
    17821 cgtatcaagc aggtggcttc cggccgtttt ggcgtgacgc cagcgtacct ggtcaatgcc
    17881 gatgtgattc agattaaagt cgcgcagggc gcgaaaccgg gcgaaggcgg tcagttgccg
    17941 ggggataaag tcactccgta tatcgctaaa ctgcgctatt cagtgccggg cgtgacgctg
    18001 atctccccgc cgccgcacca cgatatttac tctatcgagg acttagcgca gctcattttc
    18061 gacctcaaac aggtcaaccc gaaggcgatg atctccgtga agctggtgtc cgaaccgggc
    18121 gtcggcacca tcgcgaccgg cgtggcgaaa gcctatgcag acctcatcac catcgctggc
    18181 tacgacggcg gtaccggcgc aagcccgctc tcttcggtga aatacgctgg ctgcccgtgg
    18241 gaactaggac ttgttgaaac ccagcaggcg ctggtcgcca acggtctgcg tcacaagatt
    18301 cgtctgcagg tggacggcgg tctgaaaacc ggcgtcgata tcatcaaagc ggcgattctc
    18361 ggtgcagaaa gtttcggctt cggcaccggc ccgatggtgg cgctgggctg taaatacctg
    18421 cgcatttgcc atctgaacaa ctgcgcaacc ggcgtggcga cgcaggatga aaaactgcgt
    18481 aagaaccact atcacggcct gccgttcaaa gtgaccaact actttgaatt tatcgcccgc
    18541 gaagtgcgcg agctgatggc ttcgcttggc gtgacccgcc tggtggattt gattggccgc
    18601 accgacctgc tgaaagagct ggagggcttc accgctaaac agcagaagct ggcgctgtct
    18661 cgtctactgg aaaccgctga acctcatccg ggtaaagcgc tgtactgcac cgagaataac
    18721 ccgccgtttg ataacggtgt gctgaatgcg caactgttgc agcaggcgaa gccgtttgtc
    18781 gatgcgcgcc agagcaaaac cttctggttc gacatccgca acaccgatcg ttccgtgggt
    18841 gcgtcgcttt ccggttacat cgcacagacc cacggcgatc aggggctggc ttccgatccg
    18901 attaaagcgc acttcagcgg taccgcaggc cagagctttg gcgtgtggaa cgcgggcggc
    18961 gtggagttat atctgactgg cgatgccaac gactatgtcg gtaaaggtat ggcaggcggt
    19021 ttgatcgcca tcagaccacc ggtaggttcc gccttcctca gccataaagc cagcatcatc
    19081 ggcaacacct gcctgtatgg agcgaccggt ggccgtctgt acgcggcggg gcgcgcgggc
    19141 gaacgtttcg gcgtgcgtaa ctccggggcg attaccgtag tagagggcat cggcgacaac
    19201 ggctgtgaat acatgaccgg cggcatcgtc tgcgtgctgg gtaaaaccgg cgttaacttc
    19261 ggcgcgggga tgaccggcgg cttcgcctat gtgctggacg aagatggcga attccgtaaa
    19321 cgcgtgaacc cggaactggt agaagtactg gacgttgatt cgctggctat ccacgaagag
    19381 catctgcgcg gcctgatcac cgagcacgtg caacatactg gttcgcaacg cggcgaagag
    19441 atcctgtcca ggtggtcaag cttctcaacc caattcgcgt tagttaagcc caagtccagc
    19501 gatgtcaaag ccctgttggg ccaccgtagt cgtagtgcgg cagaattgcg cgtgcaggcg
    19561 cagtaaggaa ttgaaatgag ccagaatgtt tatcaattta tcgacctgca gcgcgttgat
    19621 ccgccgaaga aaccgctgaa gctccgtaag atcgagtttg ttgaaatcta cgaaccgttt
    19681 tctgaaggtc aggcgaaagc ccaggcggat cgctgtttgt cctgcgggaa cccctactgc
    19741 gagtggaaat gtccggtaca taactacatc ccgaactggc tgaaactggc taacgaaggg
    19801 cgtatttttg aggcggctga gctatcgcac cagaccaaca ccctgccgga agtgtgtggc
    19861 cgcgtctgcc cgcaggaccg cctgtgcgaa ggctcctgta cgctgcacga tgagttcggc
    19921 gcagtgacca tcggtaacat tgagcgctat atcaacgata aagcgttcga aatgggctgg
    19981 cgcccggata tgaccggcgt gcgccagacg gacaaacggg tagcgattat cggcgctggt
    20041 ccggcagggc tggcgtgcgc cgacgtgctg acccgcaacg gcgtgaaggc ggtggtcttt
    20101 gatcgccatc cggaaatcgg tggtctgctg accttcggta ttccagcttt caaactggaa
    20161 aaagaggtga tgacccgtcg tcgcgagatc ttcaccggca tgggtattga gttcaaactt
    20221 aataccgaag tgggtcgtga tgtacagctt gaagatctgc tgaaagatta cgatgcggta
    20281 ttccttggcg tcggcaccta tcagtcgatg cgcggcgggc tggaaaatga agatgcggac
    20341 ggggttttcg acgctctacc gttcctgatc gccaatacga agcagatcat ggggtttggc
    20401 gaaaccagcg acgaaccata tgtcagcatg gaaggcaaac gcgtggtggt gctgggcggc
    20461 ggcgataccg caatggactg cgtacgcact tccatacgcc agggcgcaac gcacgtaacc
    20521 tgtgcttatc gtcgtgatga agagaacatg ccgggttcca gacgcgaagt gaaaaacgcg
    20581 cgcgaggaag gtgtcgagtt tcagtttaac gttcaaccgc tgggcattga agtcaatgcc
    20641 aacggcaaag tgagcggcgt aaaaatggtg cgcactgaaa tgggcgaacc ggatgccaaa
    20701 ggccgtcggc gggcggagat cgtcgccggt tccgagcatg tggttccggc tgatgcggtg
    20761 gtgatggcgt ttggttttcg tccacacagc atggaatggc tggcgaaaca cagcgtggaa
    20821 ctggactcgc agggacgaat tatcgcgccg gaacgcagcg ataatgcttt ccagaccagc
    20881 aacccgaaaa tcttcgccgg tggcgacatc gtgcgcggtt ccgatctggt ggtgacggcg
    20941 attgccgaag gccgtaaagc ggctgacggg attatgaact acctcgaagt gtaacccttt
    21001 cggctccccg gttgatgcct tgtgctgatg gctggggagc cgatattcct ctcctcaata
    21061 tctctcctgc cgattctgga aacccgctcg taaatcgaga tgtaatgcca tgtaaaatcc
    21121 gttcatggat tgattcgttt acgcctgaag cgtattgata gcgttctaat ttcacaatga
    21181 aactatcacg taagggatga catgacgaat ccaactttag cgccacagtc tgatgaatat
    21241 cagcaaattc atgacggtat tattcgtctg gtcgatacgg cacgtaccga gaccgtgcgc
    21301 agcatcaatg ccattatgac tgccacctac tgggaaattg gccgacgtat tgtcgaattt
    21361 gaacagggag gagaagcgcg agcggcctat ggcacccagc ttatcgaacg attatcggta
    21421 gatttaagtc agcgctataa gcgcggtttt tccaacagaa acctatggca aattcgtaca
    21481 ttttatcttt gttttcaaca cattgaaatt ccgcagacac tgtctgcgga atcttcaaat
    21541 ctcataccgc tcgccaaaac attccctctt ccctggtcag cttatgtgcg tctgctgtcg
    21601 gtgaaagata acgatgcccg cactttttac gagaaagaga cgctacgtaa cggctggtcc
    21661 gtacggcaac tcgatcggca aatcgccact caattttacg aacgaacgct actgtcccac
    21721 gacaaatccg ccatgttgca gcagcctgca cccgccgagc caaacgtttt gccggagcaa
    21781 gccatacgcg acccgttcat tctggaattt cttaacctga aggacgagta ttccgaatca
    21841 gatctcgaag acgcgctgct cagccacctg atggacttta tgctggagct cggtgacgat
    21901 tttgcttttg ttggccgcca acgccgacta cgcatagacg atagctggtt ccgcgtcgat
    21961 ctgctgttct tccatcgtcg cttgcgctgc ctgttgctcg ttgacctgaa ggtaggcaaa
    22021 ttcggttatg cggatgccgg gcagatgaat atgtacctga actatgccaa agagcactgg
    22081 acaatgcccg gagaaaaccc gccagtcggc ctggttttgt gcgcagggaa aggcgcgggg
    22141 gaagcgcatt acgcgctgac tggcctgcca aacaccatca tggcgagcga gtacaaagtg
    22201 cagttgcccg acgaaaaatt actcacagac gaacttattc gttcgcaaac catgctggaa
    22261 actcaactca cacgcggtgg ttcactgaca acggagaaaa actagcgaac cattaatgcc
    22321 atgaataatt atcaaaaaaa atatcacacg aaaacgtttg ctttattctg agaactgtat
    22381 attatgcggc ggattttttg ggcaaaattc atggaggcgt tgtgtcgcag gacaacaatt
    22441 atagccaggg gccagttccc caggcggcgc ggaagggcgt gattccactg acgtttgtca
    22501 tgttgggttt aacgtttttt tccgccagta tgtggaccgg agggacactc ggcaccggtc
    22561 ttacctatca tgatttcttc ctcgcagttt tcttcggtaa tctcctcctc ggtatctaca
    22621 ctgcatttct tggctacatc ggcgcaaaaa ccggactctc cacccacctc cttgcacgtt
    22681 actcctttgg cgttaaaggc tcatggcttc cctcgctgct gttaggcagt actcaagtgg
    22741 gctggtttgg cgttggcgta gcgatgttcg ctattccggt cagtaaagcg acgggcattg
    22801 atgccaatat cctgattgcc gtttcgggtc tgctgatgac cctgaccatt tttttcggca
    22861 tctcggcgtt gaccattttg tctatcgttg ccgtacccgc gatcgttatt ctgggcagct
    22921 actccgtctg gctggcggtc agcggcgtgg gtgggctgga gcatttaaaa acgatagtgc
    22981 cgcagacgcc gctggatttt tccagcgcgc tggcgctggt ggtgggctcg tttgtcagcg
    23041 ccggtacatt gaccgccgac ttcgtccgct tcggacgtca tgccaaaagc gccgtactga
    23101 ttgcgatggt cgcttttttc ctcggtaact cgctgatgtt tatcttcggc gcggcaggcg
    23161 ctgccgccgt cggtcaggcg gatatctctg acgtgatgat agcgcagggg ctgctgctgc
    23221 ccgcgattgt ggtgcttggc ctgaatatct ggaccaccaa cgataacgcg ctgtacgcat
    23281 cgggtctggg cttcgccaat attaccggtc tttccagccg cacgctgtcg gtggtgaacg
    23341 ggattatcgg taccgtgtgc gcgctgtggc tttacaataa ttttgtcggc tggctgacgt
    23401 tcctgtcatc tgccatccca ccgattggtg gagtgattat tgccgactat ctggtgaacc
    23461 gccgccgcta tgccgacttc aacaccgtgc gctttattcc cgttaactgg attgctattc
    23521 tttccgtcgc gctgggcatc gccgccggac attatgttcc tggtattgtg cccgtcaacg
    23581 ccgtactcgg cggcgtcttc agctatatcc tgctgaatcc acttttcaac cgcagccttg
    23641 ctaaatcacc agaggtcagc catgcagaac aataacatca ctattcgtca gacgcgtctg
    23701 cagggacacg aaggattatg gcagattacg attgaaaacg ggcgctttag ccggattgag
    23761 cctcaggaag ccacatcgtt accgcagggc gaagtgcttg atgccgaagg cggtctggct
    23821 attccaccgt ttgttgagcc acatatccac ctggatacca cgcaaacggc gggtgaaccg
    23881 agctggaacc agtccggcac actgtttgaa gggattgagc gctgggcaga acgtaaagca
    23941 atgctcacgc atgaagatgt gaaagcgcgc gcgatgcaga ccctgaaatg gcagatggct
    24001 aacggcatcc agtacgttcg tactcacgtt gacgtttcag atcctacgct caccgcgctg
    24061 aaagccatgc tggaagtgaa gcaagaggtt gcgccgtggg tagacctaca aatcgtcgcc
    24121 tttccgcaag aaggtattct gtcttatccc aacggtgaag cgctgttaga ggaagccgtg
    24181 cgtttgggcg ctgacgttat tggcgccatt ccgcactttg agttcacgcg ggaatatggc
    24241 gttgaatcgc tgcacaaaac cttcgccctg gcgcaaaaat acgatcgctt gatcgatgtg
    24301 cactgcgacg aaattgatga cgagcagtct cgctttgtcg aaacggtcgc ggcgctggcg
    24361 catcgtgatg gcatgggggc gcgcgtgacc gccagccaca ccacggctat gcactcgtac
    24421 aacggcgcgt atgcgtcacg cctgttccgt ctgttgaaaa tgtcggggat taacttcgtc
    24481 gccaacccgc tggtaaatat tcatctgcaa gggcggtttg acacttaccc gaaacgtcgt
    24541 ggcgtcacgc gagtgaaaga gatgctggaa gcggggatca acgtctgctt tggccatgat
    24601 gacgtcttcg acccgtggta tccattaggc accgccaata tgctgcaggt gctgcatatg
    24661 gggttacacg tttgccagtt gatggggtat gggcaaatca acgacgggtt aaatctgatc
    24721 actacccaca gcgcaaaaac tttgcacctg caggactacg gtctgagcgt cggcaatgcc
    24781 gcgaatctgg ttatcttacc cgctgagaat ggattcgatg cggtacgtcg ccagacgcct
    24841 gcccgttact caattcgcca caggcgggtg attgccgaga cggtgccgag ccagacgacg
    24901 ctgcacctga cccagccgga agccgtgacg tttaagcgtt aacccgtcat acccgcgctc
    24961 tccggcacat tcaccacgca gcccgtaagg ggctgcgttc ggaagactgc tccggcaaga
    25021 gattcaggcc gccagcaaac tggcgcgtac tttcactacc actttcttga tgtcatccgg
    25081 ttcacccact gcacatcccg gtttatgcgg ttctcccggc ataaacacag caaacatccc
    25141 cgcttgcagc gtaatagtct gctcgtcggc aatttgacta caaagctggt aatcctcttc
    25201 aacgtgcatc tcctcgcact ggcgagcggc accggacatc ccaaacgcaa tacgctcgac
    25261 gccggttagt agtagctgaa tatcaatgta ttgttcatgc aattccgctt tcttcccggc
    25321 aggcatttgc gtcgttaact gcattacatt cataaagata ttgtcgccct gcaattcata
    25381 gcgccccggt gctttctcct gcggccttgc cgccagcgcg agagtcaagg catccagcag
    25441 tcgcggatgc aacccgcaag aaggcaacga ctgtacttcc cccatcatca taatgtgtct
    25501 ccttgagcta acaaagcagc gcctaataat cctgcgtcat gccgatagcg agcggcgctc
    25561 agcgccacgt gataaggctc aggctcttgc atcaaaaacg cgcgaacctg ctccaggtat
    25621 ccctcagcta accctacgct gccgccaatg accacacact ggcagtcggt aatcgctttc
    25681 acatcggcga tcattcgcgc tattacctgc gcggattggc ttaccagatg tcgcgcctgc
    25741 tgatgacctt cgccagcgcg aataaatagg gttttggcgt cgcatcccgc cagatcgtcc
    25801 cgcgccgccg cggccatccc tcgtccggag gcgatggcct
//
LOCUS       DAGWFR010000049        25326 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.050, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000049 DAGWFR010000000
VERSION     DAGWFR010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 25326)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25326)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25326
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.050"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..445
                     /locus_tag="MOX77_002022"
     CDS             <1..445
                     /locus_tag="MOX77_002022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="penicillin-binding protein activator"
                     /protein_id="HCA3357561.1"
                     /translation="GGRVDAVYILATPEEIGFIKPMIAMRNGTQSGATLYASSRSAQG
                     TSGPDFRLEMEGLQYSEIPMLAGGNTPLMQQALSAVHNDYSLARMYAMGVDAWTLANH
                     FSQMRQVQGFEINGNTGALTASPDCVINRKLSWLKYQQGEIVPAS"
     gene            403..798
                     /locus_tag="MOX77_002023"
     CDS             403..798
                     /locus_tag="MOX77_002023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HCA3357562.1"
                     /translation="MAQIPARGDCSRQLTRKQAGDAWEAAARLWLESKGLRFIAANVR
                     ERGGEIDLIMRDGKTTVFVEVRYRRSGLYGGAAASVTRSKQHKLLHTARLWLARQNGS
                     FDTVDCRFDVLAFTGNEIEWFRDAFNDHS"
     gene            820..1410
                     /gene="diaA"
                     /locus_tag="MOX77_002024"
     CDS             820..1410
                     /gene="diaA"
                     /locus_tag="MOX77_002024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA initiator-associating protein DiaA"
                     /protein_id="HCA3357563.1"
                     /translation="MLERIKVCFTESIQTQIAAAEALPDAISRAAMTLVHSLLNGNKI
                     LCCGNGTSAANAQHFAASMINRFETERPSLPAIALNTDNVVLTAIANDRLHDEVYAKQ
                     VRALGHAGDVLLAISTRGNSRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGPQDVE
                     IRIPSHHSARIQEMHMLTVNCLCGLIDNTLFPHQDD"
     gene            1420..1995
                     /gene="yraP"
                     /locus_tag="MOX77_002025"
     CDS             1420..1995
                     /gene="yraP"
                     /locus_tag="MOX77_002025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divisome-associated lipoprotein YraP"
                     /protein_id="HCA3357564.1"
                     /translation="MKAFSPLAVLISALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQ
                     VDDGTLELRVSSALSKDEQIKKETRINVTAYQGKVLLVGQSPNSELSARAKQIAMGVE
                     GTTEVYNEIRQGQPIGLGTASNDTWITTKVRSQLLTSDQVKSSNVKVTTENGEVFLLG
                     LVTEREGKAAADIASRVSGVKRVTTAFTYIK"
     gene            complement(2062..2697)
                     /locus_tag="MOX77_002026"
     CDS             complement(2062..2697)
                     /locus_tag="MOX77_002026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000084527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-binding protein"
                     /protein_id="HCA3357565.1"
                     /translation="MSQVLITGATGLVGGHLLRMLINTPQVSAIAAPTRRPLTDIVGV
                     YNPHDPQLTDALAQVTDPVDIVFCCLGTTRREAGSKAAFIHADYTLVVDTALTGRRLG
                     AQHMLVVSAMGANAHSPFFYNRVKGEMEEALIAQNWPRLTIARPSMLLGDRTTRRVNE
                     TLFAPLFRLLPGNWKSIDARDVARAMLAEALEPAQEGVTILTSSQLREKAG"
     gene            2828..3346
                     /gene="yhbO"
                     /locus_tag="MOX77_002027"
     CDS             2828..3346
                     /gene="yhbO"
                     /locus_tag="MOX77_002027"
                     /EC_number="3.5.1.124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein/nucleic acid deglycase"
                     /protein_id="HCA3357566.1"
                     /translation="MSKKIAVLITDEFEDSEFTSPAAEFRQAGHEVITIEKEAGKTVK
                     GKKGEASVTIDKAIDDVRPDEFDALLLPGGHSPDYLRGDSRFVDFTRDFVNSGKPVFA
                     ICHGPQLLISADVIRGRKLTAVKPIIIDVKNAGAEFYDQEVVVDKDQLVTSRTPDDLP
                     AFNREALRLLGA"
     gene            complement(3326..3769)
                     /locus_tag="MOX77_002028"
     CDS             complement(3326..3769)
                     /locus_tag="MOX77_002028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhbP family protein"
                     /protein_id="HCA3357567.1"
                     /translation="MDTLTAIGRWLAKQHVVTWCVHHEGELWCANAFYLFDAQNVALY
                     LLTDDKTRHAQMSGACAPVAGTVNGQPKTVARIRGVQFKGEIRRLEGQESDAARKAYL
                     RRFPVARVLPAPVWEIRLDEIKFTDNTLGFGKKLHWLRDSRAQQA"
     gene            3807..4124
                     /locus_tag="MOX77_002029"
     CDS             3807..4124
                     /locus_tag="MOX77_002029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462184.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HCA3357568.1"
                     /translation="MLMATMTPWYLYLIRTADNALYTGITTDVARRYRQHQTGKGAKA
                     LRGKGELTLAFAAQVGDRSLALRIEYRIKQLTKRQKERLVTEREAFEALLSSLQTPVL
                     KND"
     gene            complement(4111..4614)
                     /locus_tag="MOX77_002030"
     CDS             complement(4111..4614)
                     /locus_tag="MOX77_002030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HCA3357569.1"
                     /translation="MLIRVEIPIDAPGIDALLRRSFESDAEAKLVHDLREDGFLTLGL
                     VATDDEGQVVGYVAFSPVDVQGEDLQWVGMAPLAVDEKYRGQGLARQLVYEGLDSLNE
                     FGYAAVVTLGDPALYSRFGFELAAHYDLHCRWPGTESAFQVHRLAEDALEGVTGLVEY
                     HDHFNRF"
     gene            complement(4608..5132)
                     /locus_tag="MOX77_002031"
     CDS             complement(4608..5132)
                     /locus_tag="MOX77_002031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCP2 domain-containing protein"
                     /protein_id="HCA3357570.1"
                     /translation="MLDKLRSRLVHAGPSLMSVPVKLTPFALKRQVLEQVLSWQFRQA
                     LADGELEFLEGRWLSIHVRDIDLKWYTTVENEKLIVSQQADADVSFSADASDLLMIAA
                     RKQDPDTLFFQRRLVIEGDTELGLYVKNLMDAIELEQMPKALRIMLLQLADFVEAGMK
                     NSPETKQTSVGEPC"
     gene            5349..6344
                     /locus_tag="MOX77_002032"
     CDS             5349..6344
                     /locus_tag="MOX77_002032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017457364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HCA3357571.1"
                     /translation="MELLCPAGNLPALKAAIENGADAVYIGLKDDTNARHFAGLNFTE
                     KKLQEAVSFVHQHRRKLHIAINTFAHPDGYARWQRAVDMAAQLGADALILADLAMLEY
                     AAERYPHIERHVSVQASATNEEAIRFYHRNFDVHRVVLPRVLSIHQVKQLARVTPVPL
                     EVFAFGSLCIMAEGRCYLSSYLTGESPNTVGACSPARFVRWQQTPQGLESRLNDVLID
                     RYQDGENAGYPTLCKGRYLVDGERYHALEEPTSLNTLELLPELMAANIASVKIEGRQR
                     SPAYVSQVAKVWRQAIDRCKAAPQNFVPQRDWMETLGAMSEGTQTTLGAYHRKWQ"
     gene            6335..7231
                     /locus_tag="MOX77_002033"
     CDS             6335..7231
                     /locus_tag="MOX77_002033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462188.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HCA3357572.1"
                     /translation="MAVRGAMKYSLGPVLYYWPKETLEDFYQQAAKSSADIIYLGEAV
                     CSKRRATKVGDWLEMAKSLAASGKQVALSTLALVQASSELSELKRYVDNGDFLLEASD
                     LGVVNLCAERKLPFVAGHALNCYNAVTLRRLLKEGMVRWCMPVELSRDWLVNLLNQCD
                     ELGIRNQFEVEVLSYGHLPLAYSARCFTARSEDRPKDECETCCIKYPNGRDVLSQENQ
                     QVFVLNGIQTMSGYVYNLGNELTSMQGLVDIVRLSPLGTETFAMLDAFRANENGGAPL
                     PLAAHSDCNGYWKRLAGLELQA"
     gene            7409..8416
                     /locus_tag="MOX77_002034"
     CDS             7409..8416
                     /locus_tag="MOX77_002034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HCA3357573.1"
                     /translation="MTDKTIPFSVLDLAPIPEGSSAKEAFTHSLDLARLAEKRGYHRY
                     WLAEHHNMTGIASAATSVLIGYLAANTTTLHLGSGGVMLPNHSPLVIAEQFGTLNTLY
                     PGRIDLGLGRAPGSDQPTMRALRRHMSGDIDNFPRDVAELVDWFDARDPNPHVRPVPG
                     YGEKIPLWLLGSSLYSAQLAAQLGLPFAFASHFTPDMLFQALHLYRTQFKPSARLEKP
                     YAMVCINIIAADSNRDAEFLFTSMQQAFVKLRRGETGQLPPPIENMETFWSPSEQYGV
                     QQALSMSLVGDKAKVRHGLVSILRETQADEIMVNGQIFDHQARLHSFDLAMDVKQELL
                     G"
     gene            complement(8507..9751)
                     /gene="mtr"
                     /locus_tag="MOX77_002035"
     CDS             complement(8507..9751)
                     /gene="mtr"
                     /locus_tag="MOX77_002035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan permease"
                     /protein_id="HCA3357574.1"
                     /translation="MATLTTTQTSPSLLGGVVIIGGTIIGAGMFSLPVVMSGAWFFWS
                     MAALVFTWFCMLHSGLMILEANLNYRIGSSFDTITKDLLGKGWNVVNGISIAFVLYIL
                     TYAYISASGSILHHTFAEMSLNVPARAAGFAFALLVAFVVWLSTKAVSRMTAIVLGAK
                     VITFFLTFGSLLGHVQPTTLFNVAESHASYTPYLLMTLPFCLASFGYHGNVPSLMKYY
                     GKDPRTIVKCLIYGTLLALALYSVWLLGTMGNIPRPEFIGIAQKGGNIDVLVQALSGV
                     LNSRSLDLLLVVFSNFAVASSFLGVTLGLFDYLADLFGFDDSAMGRFKTALLTFLPPM
                     IGGLLYPNGFLYAIGYAGLAATIWAAIVPALLARKSRERFGSPKFRVWGGKPMIALIL
                     VFGVGNAVIHILSSFNLLPVYQ"
     gene            complement(9905..11794)
                     /gene="deaD"
                     /locus_tag="MOX77_002036"
     CDS             complement(9905..11794)
                     /gene="deaD"
                     /locus_tag="MOX77_002036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312070.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase DeaD"
                     /protein_id="HCA3357575.1"
                     /translation="MAEFETTFADLGLKAPILEALTDLGYEKPSPIQAECIPHLLGGR
                     DVLGMAQTGSGKTAAFSLPLLNNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMR
                     GVNVVALYGGQRYDVQLRALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADE
                     MLRMGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRP
                     DISQSYWTVWGMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALN
                     GDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIG
                     RTGRAGRAGRALLFVENRERRLLRNIERTMKLTIPEVELPNAELLGKRRLEKFAAKVQ
                     QQLESSDLDQYRALLAKIQPSAEGEELDLETLAAALLKMAQGERPLILPPDAPMRPKR
                     EFRDRDDRGPRDRNDRGPRGDREERPRRERRDVGDMQLYRIEVGRDDGVEVRHIVGAI
                     ANEGDISSRYIGNIKLFASHSTIELPKGMPGEVLQHFTRTRILNKPMNMQLLGDAVPH
                     AGGERRGGGRSFSGERREGGRNFSGERREGGRGDGRRFSGERRESRGPRRDDSTGRRR
                     FGGDA"
     gene            complement(11787..11867)
                     /gene="yrbN"
                     /locus_tag="MOX77_002037"
     CDS             complement(11787..11867)
                     /gene="yrbN"
                     /locus_tag="MOX77_002037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YrbN"
                     /protein_id="HCA3357576.1"
                     /translation="MKIADQFHDELCRLAAINFEAHVLHG"
     gene            complement(11973..12857)
                     /gene="nlpI"
                     /locus_tag="MOX77_002038"
     CDS             complement(11973..12857)
                     /gene="nlpI"
                     /locus_tag="MOX77_002038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020802045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein NlpI"
                     /protein_id="HCA3357577.1"
                     /translation="MKPFLRWCFVATALTLAGCSNSAWRKSEVLAVPLQPTLQQEVIL
                     ARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYL
                     GIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDD
                     PNDPYRSLWLYLVEQKLNEKQAKEALKARFEKSDKEQWGWNIVEFYLGDISEATLMER
                     LKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNVHNFVEHRYALL
                     ELSLLGQDQDDLAESDQQ"
     gene            complement(12967..15102)
                     /gene="pnp"
                     /locus_tag="MOX77_002039"
     CDS             complement(12967..15102)
                     /gene="pnp"
                     /locus_tag="MOX77_002039"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HCA3357578.1"
                     /translation="MLNPIVREFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTV
                     VGQKKAKPGQDFFPLTVNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPVRPL
                     FPEGFVNEVQVIATVVSVNPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQ
                     YVLNPTQDELKESKLDLVVAGTEAAVLMVESEAELLSEDTMLGAVVFGHEQQQVVIQA
                     INDLVKEAGKPRWDWQPEAVNDALNARVAALAESRLSDAYRITDKQERYAQVDVIKSE
                     TIEQLIAEDETLDANELGEILHAIEKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVL
                     PRTHGSALFTRGETQALVTATLGTARDAQVLDELMGERTDSFLFHYNFPPYSVGETGM
                     VGSPKRREIGHGRLAKRGVLAVMPDMDKFPYTVRVVSEITESNGSSSMASVCGASLAL
                     MDAGVPIKAAVAGIAMGLVKEGDNYVVLSDILGDEDHLGDMDFKVAGSRDGISALQMD
                     IKIEGITKEIMQVALNQAKGARLHILGVMEQAINAPRGDISEFAPRIHTIKISTDKIK
                     DVIGKGGSVIRALTEETGTTIEIEDDGTVKIAATDGEKAKYAIRRIEEITAEIEVGRI
                     YNSKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVEKVTDYLQMGQEVPVKVLEVDRQ
                     GRVRLSIKEATEQSQPAAAPEAPASEQAE"
     gene            complement(15344..15613)
                     /gene="rpsO"
                     /locus_tag="MOX77_002040"
     CDS             complement(15344..15613)
                     /gene="rpsO"
                     /locus_tag="MOX77_002040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004933502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HCA3357579.1"
                     /translation="MSLSTEATAKIVSEFGRDANDTGSTDVQVALLTAQINHLQGHFA
                     EHKKDHHSRRGLLRMVSQRRKLLDYLKRKDVARYTALIERLGLRR"
     gene            complement(15764..16708)
                     /gene="truB"
                     /locus_tag="MOX77_002041"
     CDS             complement(15764..16708)
                     /gene="truB"
                     /locus_tag="MOX77_002041"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HCA3357580.1"
                     /translation="MSRPRRRGRDIHGVLLLDKPQGMSSNDVLQKVKRIYNANRAGHT
                     GALDPLATGMLPICLGEATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVQERPVT
                     FSAEQLASALETFRGDIEQIPSMYSALKYQGRKLYEYARQGIEVPREARPITVYELLF
                     IRHEGNELELEVHCSKGTYIRTIIDDLGEKLGCGAHVTYLRRLTVSKYPVDRMVTLEH
                     LQTLVAQAEQQGVPAAQLLDPLLMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTTGAP
                     LKGLVRVTEGEDDKFIGMGEIDDEGRVAPRRLVVEYPA"
     gene            complement(16708..17109)
                     /gene="rbfA"
                     /locus_tag="MOX77_002042"
     CDS             complement(16708..17109)
                     /gene="rbfA"
                     /locus_tag="MOX77_002042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001712908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HCA3357581.1"
                     /translation="MAKEFGRPQRVAQEMQKEIALILQREIKDPRVGMMTTVSGVEMS
                     RDLAYAKVFVTFLNDQDEAAVKNGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNS
                     LVEGMRMSNLVTNVVKHDEERRVNPDDSKED"
     gene            complement(17330..20008)
                     /gene="infB"
                     /locus_tag="MOX77_002043"
     CDS             complement(17330..20008)
                     /gene="infB"
                     /locus_tag="MOX77_002043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HCA3357582.1"
                     /translation="MTDLTLKALAAERQVSVDRLVQQFADAGIRKSADDSVSAQEKQT
                     LLAHLNREAVSGPDKLTLQRKTRSTLNIPGTGGKSKSVQIEVRKKRTFVKRDPQEAER
                     LAAEEQAQREAEEQARREAEEQAKREAQQKAEREAAEQAKREAAEKAKREAAEKDKVS
                     NQQTDDMTKTAQAEKARRENEAAELKRKAEEEARRKLEEEARRVAEEARRMAEENKWT
                     ATPEPVEDTSDYHVTTSQHARQAEDENDREVEGGRGRGRNAKAARPAKKGKHAESKAD
                     REEARAAVRGGKGGKRKGSSLQQGFQKPAQAVNRDVVIGETITVGELANKMAVKGSQV
                     IKAMMKLGAMATINQVIDQETAQLVAEEMGHKVILRRENELEEAVMSDRDTGAAAEPR
                     APVVTIMGHVDHGKTSLLDYIRSTKVASGEAGGITQHIGAYHVETDNGMITFLDTPGH
                     AAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAGVPVVVAVNKIDKPEAD
                     PDRVKNELSQYGILPEEWGGESQFVHVSAKAGTGIDELLDAILLQAEVLELKAVRKGM
                     ASGAVIESFLDKGRGPVATVLVREGTLHKGDIVLCGFEYGRVRAMRNELGQEVLEAGP
                     SIPVEILGLSGVPAAGDEVTVVRDEKKAREVALYRQGKFREVKLARQQKSKLENMFVN
                     MTEGEVHEVNIVLKADVQGSVEAISDSLLKLSTDEVKVKIIGSGVGGITETDATLAAA
                     SNAILVGFNVRADASARKVIESESLDLRYYSVIYNLIDEVKAAMSGMLSPELKQQIIG
                     LAEVRDVFKSPKFGAIAGCMVTEGTIKRHNPIRVLRDNVVIYEGELESLRRFKDDVNE
                     VRNGMECGIGVKNYNDVRVGDMIEVFEIIEIQRTIA"
     gene            complement(20033..21535)
                     /gene="nusA"
                     /locus_tag="MOX77_002044"
     CDS             complement(20033..21535)
                     /gene="nusA"
                     /locus_tag="MOX77_002044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005131833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusA"
                     /protein_id="HCA3357583.1"
                     /translation="MNKEILAVVEAVSNEKALPREKIFEALESALATATKKKYEQEID
                     VRVEIDRKSGDFDTFRRWLIVEEVTMPTKEITLEAARFEDESLNVGDYVEDQIESVTF
                     DRITTQTAKQVIVQKVREAERAMVVDQFRDQEGEIVTGVVKKVNRDNISLEIKSEGMA
                     GNAEAVILREDMLPRENFRPGDRIRGVLYAVRPEARGAQLFVTRSKPEMLIELFRIEV
                     PEIGEEVIEIKAAARDPGSRAKIAVKTNDKRIDPVGACVGMRGARVQAVSTELGGERI
                     DIVLWDDNPAQFVINAMAPADVASIVVDEDKHTMDIAVEAGNLAQAIGRNGQNVHLAS
                     QLSGWELNVMTVDDLQAKHQAEAHAAIEIFTKYLDIDEEFATVLVEEGFSTLEELAYV
                     PMKELLEIDGLDEPTVEALRERAKNALATLAQDQEASLGDNKPADDLLNLEGLDRDMA
                     FKLAARGVCTLEDLADQGIDDLADIEGLTDEKAGELIMAARNICWFGDEA"
     gene            complement(21563..22015)
                     /gene="rimP"
                     /locus_tag="MOX77_002045"
     CDS             complement(21563..22015)
                     /gene="rimP"
                     /locus_tag="MOX77_002045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004125659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HCA3357584.1"
                     /translation="MSTLEQKLTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSED
                     GINVDDCADVSHQVSAVLDVEDPISVAYNLEVSSPGLDRPMFTADHYARFQGEEVALV
                     LRMAVQNRRKWQGIIKAVDGEMITVTVEGKDEVFALSNIQKANLVPHF"
     gene            complement(22223..22299)
                     /locus_tag="MOX77_002046"
     tRNA            complement(22223..22299)
                     /locus_tag="MOX77_002046"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(22263..22265),aa:Met,seq:cat)
     gene            22643..23986
                     /gene="argG"
                     /locus_tag="MOX77_002047"
     CDS             22643..23986
                     /gene="argG"
                     /locus_tag="MOX77_002047"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HCA3357585.1"
                     /translation="MTTILKHLPAGQRIGIAFSGGLDTSAALLWMRQKGAVPYAYTAN
                     LGQPDEDDYDAIPRRAMEYGAENARLIDCRKQLVAEGIAAIQCGAFHNTTGGLTYFNT
                     TPLGRAVTGTMLVAAMKEDGVNIWGDGSTYKGNDIERFYRYGLLTNAELQIYKPWLDT
                     DFIDELGGRHEMSEFMIACGFDYKMSVEKAYSTDSNMLGATHEAKDLEFLNSSVKIVN
                     PIMGVKFWDESVKIPAEEVTVRFEQGHPVALNGKTFSDDVEMMLEANRIGGRHGLGMS
                     DQIENRIIEAKSRGIYEAPGMALLHIAYERLLTGIHNEDTIEQYHSHGRQLGKLLYQG
                     RWFDSQALMLRDGLQRWVASQITGEVTLELRRGNDYSILNTVSDNLTYKAERLTMEKG
                     ESVFSPDDRIGQLTMRNLDITDTREKLFGYAKAGLLTASSATGLPQVENLENKAK"
     gene            complement(24184..24270)
                     /locus_tag="MOX77_002048"
     tRNA            complement(24184..24270)
                     /locus_tag="MOX77_002048"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(24234..24236),aa:Leu,seq:gag)
     gene            complement(24284..24616)
                     /gene="secG"
                     /locus_tag="MOX77_002049"
     CDS             complement(24284..24616)
                     /gene="secG"
                     /locus_tag="MOX77_002049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HCA3357586.1"
                     /translation="MYEALLVVFLIVAIGLVGLIMLQQGKGADMGASFGAGASATLFG
                     SSGSGNFMTRMTAVLATLFFIISLVLGNINSNKTNKGSEWENLSAPAKTEQTQPAAPA
                     QPTSDIPR"
     gene            complement(24839..>25326)
                     /gene="glmM"
                     /locus_tag="MOX77_002050"
     CDS             complement(24839..>25326)
                     /gene="glmM"
                     /locus_tag="MOX77_002050"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462205.1"
                     /note="catalyzes the conversion of glucosamine-6-phosphate
                     to glucosamine-1-phosphate; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HCA3357587.1"
                     /translation="MSNMGLELALKQLGIPFARAKVGDRYVLEKLQEKGWRIGAENSG
                     HVILLDKTTTGDGIVAGLQVLAAMVRNHMSLHDLCSGMKMFPQILVNVRYTAGSGDPL
                     ENEAVKAVTADVEATLGNRGRVLLRKSGTEPLIRVMVEGEDEAQVTAFAHRIADAVKA
                     V"
BASE COUNT         5827 a         7215 c         6484 g         5800 t
ORIGIN      
        1 cggcggacgc gtagacgcgg tctatattct ggctacgccg gaagagattg gctttatcaa
       61 accgatgatc gccatgcgta acggcaccca gagcggcgcg acgctgtatg ccagctcccg
      121 cagcgcgcaa ggcacctccg gccctgactt ccgtctggag atggaaggtt tgcaatacag
      181 tgaaattccc atgctggcag gcggcaatac gccgttgatg cagcaggcgc tgagtgctgt
      241 acataacgac tattctctgg cgcggatgta cgccatgggc gtggatgcct ggacgctggc
      301 gaaccacttt tcgcagatgc gtcaggtgca ggggtttgag atcaatggta ataccggcgc
      361 attaaccgcc agcccggatt gtgtgattaa caggaagtta tcatggctca aataccagca
      421 aggggagatt gttcccgcca gctaacacgt aaacaggctg gcgacgcgtg ggaagctgcc
      481 gcgcgtctct ggctggaaag caaaggactg cggtttatcg ccgccaacgt gcgcgagcgc
      541 ggcggcgaaa tcgatctgat catgcgcgac ggaaaaacga cggtttttgt tgaggttcgc
      601 tatcggcgct ccgggcttta tggcggcgcg gcggctagtg tgacccgcag caagcaacac
      661 aaattattac atactgcccg cttgtggctc gcccgccaga atgggagttt tgatactgtg
      721 gattgtcggt tcgatgtgtt agccttcacc ggaaatgaga ttgagtggtt tcgggatgcg
      781 tttaacgacc actcataatt gaagatttta aggattagcg tgctcgaaag aatcaaagtt
      841 tgctttacag aaagcattca aactcaaatt gctgcggcgg aagcgcttcc ggatgccatt
      901 tcccgcgccg ccatgacgct ggttcattcc ctgcttaacg gcaacaaaat cctctgttgt
      961 ggaaacggga cgtccgcggc caacgcacag cattttgctg ccagcatgat taaccgcttt
     1021 gaaacggagc gacccagttt acccgccatt gcactaaata ccgataatgt ggtcttaact
     1081 gcgatcgcta acgatcgcct gcacgatgaa gtttatgcaa aacaagtccg ggcgctggga
     1141 catgcaggcg atgttttatt ggcgatctct acgcgtggta atagtcgcga tatcgtaaaa
     1201 gccgttgaag cagccgtcac acgtgacatg accattgtgg cgctaaccgg gtatgacggg
     1261 ggcgagctgg ccggactatt agggccgcag gatgttgaaa ttcgtatccc ttcacaccac
     1321 agcgcgcgca ttcaggaaat gcatatgctg acggtaaact gcctgtgcgg tttgatcgat
     1381 aacacgcttt ttcctcacca ggatgattaa ggagtacaca tgaaggcatt ttcgccgctc
     1441 gcagtcctta tttctgcgtt gctattgcaa ggttgcgtcg ccgccgcggt agtgggtacg
     1501 gcagccgtcg gcaccaaagc cgcaaccgac ccgcgtagcg tgggcaccca ggtggatgac
     1561 ggaacgctgg aactgcgtgt cagcagcgcg ctgtcgaaag atgagcaaat caaaaaagag
     1621 acgcgcatca atgtcactgc ttatcagggc aaagttttgt tagtgggcca gtcgccaaac
     1681 agcgaactct ccgcacgcgc gaaacagata gcgatgggcg ttgaaggcac caccgaggtc
     1741 tataacgaga ttcgccaggg tcagcctatc ggcctgggga ccgcctctaa cgatacctgg
     1801 atcaccacga aagttcgctc acagctactg accagcgatc aggtaaaatc gtcaaatgtg
     1861 aaagtcacca ccgagaatgg cgaagtgttc ctgctgggcc tggtgactga acgtgaaggt
     1921 aaagcggcag cagacatcgc cagccgggtg agcggcgtga aacgcgtgac caccgccttt
     1981 acgtatatta agtaaccggt gtgccgggtg gcgataaaaa tgtgtaaatc gcgtcgccat
     2041 ccggtaaatc atccggcttc gctaccccgc tttttcccgc agttgcgatg aggtcagaat
     2101 cgtcacgcct tcttgtgctg gctccagcgc ttccgccagc atggcccgcg ccacatcccg
     2161 cgcatcgatc gatttccagt ttcctggcag cagccggaat agcggagcga aaagcgtttc
     2221 attcacccgc cgcgttgttc tgtcgccgag cagcatagaa ggccgggcaa tcgtcaaacg
     2281 aggccaattt tgcgcgatta acgcctcctc catttctcct ttcacccgat tgtagaaaaa
     2341 cggagagtgc gcgtttgctc ccattgcgct gaccaccaac atgtgctgcg cgcccagtcg
     2401 acgcccggtc agcgcggtat caaccaccag cgtataatcc gcatgaataa acgccgcttt
     2461 acttcccgct tcacgccggg tcgtgcccag gcagcaaaaa acaatatcca ccgggtcggt
     2521 cacctgagct aacgcgtcgg taagctgcgg atcgtgaggg ttataaacgc cgacaatatc
     2581 cgtcagcggg cgacgcgttg gcgcggcgat cgcgctcacc tgcggcgtgt tgattaacat
     2641 tctcagcaga tgtccgccga ccagtccggt cgcgccggta atcagtacct gactcatcct
     2701 cgctccttta cagatttgtc caccttgcac tctcggccct atcgaccagg cttaatagtc
     2761 tacgaggtaa gtatccatca ttgtggaaaa tttgccttac ccgacgccac cactgcggag
     2821 gaaacgcatg agtaagaaaa ttgccgtttt gattaccgat gaatttgaag attcagaatt
     2881 tacctcgccg gctgcagaat tccgtcaggc cggccatgag gtcatcacca tcgaaaaaga
     2941 ggcgggtaaa acggtgaaag gaaaaaaagg cgaggccagc gtcaccattg ataaggctat
     3001 tgatgacgtt cgtcccgacg agttcgacgc cttgctattg ccgggaggtc attcgccgga
     3061 ctacctgcgc ggcgacagcc gtttcgtgga ttttacccgc gatttcgtta acagcggtaa
     3121 accggttttt gccatttgcc acggcccgca gttgttgatc agcgccgatg tcattcgtgg
     3181 ccgcaaactc acggcggtga aaccgattat tatcgatgtg aagaatgcgg gcgcggaatt
     3241 ttacgatcag gaagtcgtcg tcgataaaga tcagctggtg accagccgca cgcctgacga
     3301 cctgccggca tttaaccgcg aggcgctacg cctgctgggc gcgtgagtca cgtaaccagt
     3361 gcagtttttt accaaacccc agcgtgttgt cggtgaattt aatttcatcc agccgaattt
     3421 cccataccgg cgctggcagc accctggcga ccgggaagcg acgaaggtaa gctttacgcg
     3481 cggcgtcgct ctcctgcccc tccagacggc gaatttcccc tttaaactgc acgccgcgaa
     3541 tgcgcgccac cgttttcggc tgaccattga ccgttcccgc aactggcgcg cacgcgccgg
     3601 acatttgcgc atggcgggtt ttatcatccg ttaacagata cagcgcgacg ttttgcgcat
     3661 cgaacaaata aaacgcattg gcgcaccaca gctctccctc atggtgtacg caccaggtca
     3721 ccacgtgttg tttcgccagc caacggccaa tagcggtaag tgtgtccatc tttattctcg
     3781 cttatactgg gaacctgaaa attatcatgc tgatggcgac aatgacaccc tggtatctgt
     3841 atctgattcg tactgcagac aatgcgcttt acaccggaat aaccaccgat gtggcgcgtc
     3901 gttacaggca gcatcaaacg ggaaaaggcg caaaagcatt acggggaaaa ggcgagttaa
     3961 cgctggcgtt tgcggcgcag gtcggcgatc gctcgctggc cctgcgcata gagtatcgca
     4021 tcaaacagct cacaaagcgc cagaaggagc gccttgtgac ggaacgcgaa gcgtttgagg
     4081 cgctgctgtc cagcctgcaa acgccggtgc ttaaaaacga ttgaagtggt cgtgatactc
     4141 caccagcccc gtcacgccct ccagcgcatc ctcagccaaa cggtgtacct ggaaagcgct
     4201 ttccgtaccg ggccaacggc agtgaagatc gtaatgtgcg gccagttcaa aaccgaagcg
     4261 gctatataac gccgggtcgc ccagcgtcac gaccgccgcg tagccgaact cgttgagcga
     4321 atccagccct tcatacacta actggcgcgc cagcccttgc ccgcgatact tttcatcgac
     4381 cgccagcggc gccatgccga cccactgtaa atcttcgccc tgcacatcaa ccgggctaaa
     4441 ggcgacatag cccactacct ggccttcatc atccgtggcc accagtccga gcgtcagaaa
     4501 accatcttca cgcaaatcgt gaaccagctt cgcttccgca tcgctttcga atgaacggcg
     4561 taacagcgca tcaataccag gcgcatcaat gggaatttct actcgaatta gcatggttca
     4621 cctaccgagg tctgtttggt ttccggcgag tttttcattc ccgcctcaac aaaatccgcc
     4681 agttgcagca gcataatgcg taacgctttc ggcatctgct ccagttcgat ggcgtccatc
     4741 agattcttca catacaaccc taactcagta tcgccttcaa tgaccagtcg acgctggaaa
     4801 aagagcgtat ccggatcctg tttacgggcg gcgatcatta gcagatcgct ggcgtcggcg
     4861 ctaaaactga cgtcagcatc cgcctgctgg ctaacgatca gcttttcatt ttcaaccgtg
     4921 gtataccatt ttaagtcgat gtcacgaaca tgaatgctta accaacgacc ttcgaggaat
     4981 tccagctctc catcggccag cgcctgacga aactgccagc tcagaacctg ttccagaacc
     5041 tggcgcttta gcgcaaaggg cgtcagttta accggtacac tcatcagaga cgggccagca
     5101 tggactaagc gtgaacgcag tttatctaac acgagcttta ctccctgttt caatagtcct
     5161 gttattttgc catatccaat aaatcacatg gcggcgtaaa tcaacaattg ggtctgattt
     5221 tctaccccat tattggtgtt accaatacgc ctttaactgc cttaaatcaa aaattgtcgc
     5281 agcaaggtta actaaaatcc ctgttcgtta acaattttgc gtcgcagacg taaccctcag
     5341 gataaattat ggagctgctc tgccctgccg gaaatctccc ggcgctgaag gcggccatcg
     5401 aaaacggcgc tgacgccgtt tatatcgggt taaaagacga taccaatgcc cgtcattttg
     5461 ccggccttaa ctttaccgaa aaaaaattgc aggaagcggt gagttttgtt caccagcatc
     5521 gccgcaaatt acacatcgcc attaatactt ttgcgcatcc ggacggctat gcccgctggc
     5581 agcgcgccgt ggatatggcg gcgcagcttg gcgccgacgc gctgattctt gccgacctcg
     5641 ctatgctgga atatgccgca gagcgttacc cgcatattga gcgccatgtt tccgttcagg
     5701 cctcggcaac caacgaagaa gcgattcgct tttatcaccg caactttgat gtccaccgtg
     5761 tagtactgcc gcgtgtactg tcgattcacc aggtaaaaca actggcccgc gtcacgccgg
     5821 tgccgctgga ggtattcgcg tttggcagcc tgtgcattat ggcagaaggt cgctgctatc
     5881 tttcttctta cctgacgggg gagtcgccca ataccgtcgg cgcctgctct cccgcccgct
     5941 ttgtccgttg gcagcaaacg ccgcaggggc tggaatcgcg cctgaatgat gtcctgattg
     6001 accgttacca ggatggcgaa aacgcaggct acccaacgct gtgtaaaggc cgctatttag
     6061 tggacggcga gcgctatcac gcgctggagg agccaaccag cctgaacacg ctggaactgc
     6121 tgccggagct catggcggcg aacatcgctt cggtgaagat cgaaggccgc cagcgcagcc
     6181 cggcctacgt cagccaggtg gcgaaagtgt ggcgccaggc gatagatcgc tgcaaagccg
     6241 ccccgcaaaa cttcgttcca cagcgcgact ggatggagac gctcggcgcg atgtccgaag
     6301 gcactcaaac cacgcttggc gcatatcacc gtaaatggca gtgagaggag ctatgaaata
     6361 ttccttagga ccggtgcttt attactggcc gaaagagacg ctggaagatt tttatcagca
     6421 ggccgcaaaa agcagcgctg atatcattta tctgggcgaa gcggtgtgca gcaaacgtcg
     6481 cgcgactaaa gtcggcgact ggctggaaat ggcgaaatcc ctcgctgcca gcggtaagca
     6541 ggtggcgctc tccaccctgg cgctggtaca ggcgtcatct gaattaagcg agctgaaacg
     6601 ctatgtggac aacggcgatt ttctgctgga agccagcgat cttggcgtgg tgaatctgtg
     6661 cgccgagcgc aaactgccgt ttgtcgccgg ccatgcgctg aattgctaca acgcggtcac
     6721 gctgcgccgg ttgctgaaag aaggcatggt acgctggtgt atgccggtgg agctctcccg
     6781 cgactggctg gtgaatttgc ttaatcagtg cgatgaactg ggcatccgca atcagtttga
     6841 agtggaggtg ttgagctacg ggcatctgcc gctggcctac tccgctcgct gctttaccgc
     6901 ccgttcggaa gaccgcccga aagatgaatg cgaaacctgc tgtatcaagt atccaaacgg
     6961 tcgtgacgtg ctctcgcaag agaatcagca ggtgtttgtg cttaacggta ttcagaccat
     7021 gagcggctat gtctataacc ttggcaacga actgacgtcg atgcagggat tggtcgatat
     7081 cgtgcggctg tcgccgttgg ggacggagac atttgccatg cttgatgcct ttcgcgctaa
     7141 cgaaaacggc ggcgcgccgt taccgcttgc cgcccatagc gactgtaacg gctactggaa
     7201 gcggctggcc gggctggagc tacaggccta gccggatggc agcatcaata ccttatccgg
     7261 cctacaaata gcgctcccga aggcccgata agcgcagcgc catcgggcat tgtttttgcc
     7321 attagtctca taaagctcac tttgttaaca acattcgcta atctttaatg cagtattaaa
     7381 agattaatcg gtaacaaagt gagccgttat gactgacaaa actattccgt tctcggtgct
     7441 ggatctggcg ccgatccctg aaggatcttc ggcaaaagaa gccttcacgc actcgcttga
     7501 tctcgcacgg ctggctgaaa agcgtggcta tcaccgctac tggctggcgg aacatcacaa
     7561 catgaccggt atcgccagcg cggcgacctc ggtattgatt ggttatctgg cggccaatac
     7621 cacaacatta catcttggct ccggcggcgt gatgctgcct aaccattcac cgctggtgat
     7681 tgccgagcag ttcggcacgc tgaatacgct ctacccggga cgtatcgact taggattggg
     7741 acgcgcgccg ggtagcgatc agccgacgat gcgcgcgctg cgtcgccata tgagcggcga
     7801 tatcgataac tttccacgcg atgtcgcaga gctggtggac tggttcgacg ctcgcgatcc
     7861 taatccgcat gtgcgcccgg tgcccggcta cggcgagaag atcccgctct ggctgttggg
     7921 ctccagcctg tatagcgcgc aactggcggc ccagcttggc ctgccgttcg cctttgcttc
     7981 gcatttcacg ccggatatgt tgttccaggc gctgcatctg taccgtactc agttcaaacc
     8041 ttcagcgcgg ctggaaaaac cgtacgcgat ggtgtgtatc aatattatcg ccgccgacag
     8101 caaccgcgac gccgaattcc tgtttacctc catgcagcag gcttttgtga agctacgccg
     8161 tggagaaacc ggccaactgc cgccgccgat tgagaatatg gaaaccttct ggtcgccatc
     8221 cgagcagtat ggcgtgcagc aggcgctgag tatgtcgctg gtcggcgata aagcgaaagt
     8281 ccgccacggg ctggtgtcca ttctgcggga aacccaggcg gatgaaatta tggtaaacgg
     8341 gcagattttc gaccaccagg cacgcctgca ttcgtttgat ttagcgatgg atgtgaagca
     8401 ggaattgttg gggtagcgca ttgttttgcc cggtggcgct tcgcttaccg ggcctacagc
     8461 atcaagtagg ccggataagg tgcaaccgcc atccggcaca ataacgttac tggtacaccg
     8521 gcagcaaatt aaagctcgac agaatatgga taaccgcgtt gccgacaccg aagaccagaa
     8581 tcagggcaat catcggttta ccgccccaga cgcgaaattt tgggctgccg aaacgttcgc
     8641 gagatttgcg cgccaacagc gcaggcacaa tggccgccca gatagttgca gctaaacctg
     8701 catagccaat ggcgtacaga aaaccgttcg ggtacagcag gccaccaatc atcggcggca
     8761 ggaaagtcag cagcgccgtt ttaaaacgtc ccattgccga gtcatcaaaa ccaaacagat
     8821 ccgccagata gtcaaacagc cccagcgtca cgccaaggaa ggaactggcg accgcaaagt
     8881 tagagaacac caccagcagc agatccaggc tgcggctgtt cagcacgccg ctcaacgcct
     8941 gtaccagcac atcaatattg ccgcctttct gcgcaatgcc gataaattcc ggacgtggga
     9001 tgttgcccat cgtccccagc agccagacgg aatagagcgc cagcgccagt aacgtcccat
     9061 aaatcaggca tttcacgatg gtgcgcggat ctttgccgta atatttcatc aggctcggta
     9121 cgttaccgtg ataaccaaaa gaggccagac aaaatggcag cgtcatcagc aggtacggcg
     9181 tatatgacgc gtggctttca gccacgttaa acaacgtggt cggctgaacg tgccctaaca
     9241 ggctgccgaa ggtcaggaag aaagtaatca ctttcgcgcc cagcacaatc gccgtcatcc
     9301 ggctgaccgc cttcgtactc agccacacga caaacgccac cagcagcgca aaggcaaaac
     9361 ctgccgctcg cgccggaacg ttcagcgaca tctcagcaaa ggtatgatgc agaattgagc
     9421 cgctcgccga gatataggcg taagtcagga tgtagagcac aaaggcaata gagatgccat
     9481 ttaccacgtt ccagcctttc cccaacagat ctttggtgat ggtgtcgaaa ctcgaaccaa
     9541 tgcggtagtt aaggttagct tcgaggatca tcagcccgga gtgcagcata caaaaccagg
     9601 taaagaccag cgccgccatc gaccagaaga accacgcccc ggacatgacc accggcaggg
     9661 agaacatccc cgcgccaatg atggtgccgc cgataatcac cacgccgcca agcagcgaag
     9721 gtgacgtttg ggtggtggta agtgttgcca ttcagctctc tctccagtca tttatagtgt
     9781 gactatctct caatacgttg cactgtacca gtacacgagt acaaaagaaa taaaaaaagc
     9841 cccgattgtg acgatcgggg ctgtatattt tactttacgc tgtgaatgcg caggtcagcg
     9901 tgagttacgc atcaccgccg aaacgacggc gaccggtaga gtcatcacga cgcggaccac
     9961 ggctttcacg acgttcgccg ctgaagcgac gaccatcacc acgaccacct tcacgacgtt
    10021 cgccgctgaa attacgaccg ccttcacgac gttcgccact gaagctacga ccaccgccgc
    10081 gacgttcgcc gcccgcgtgc ggaaccgcat cacccaacag ctgcatattc atcggcttgt
    10141 tcagaatgcg agtacgcgtg aagtgctgga gcacttcgcc cggcatacct ttcggcagct
    10201 cgatggtgga gtgagacgcg aacagcttaa tgttaccaat gtaacggctg ctaatgtcgc
    10261 cttcgttagc gatagcgccc acgatatgac gaacttcaac gccgtcatca cggcccactt
    10321 caatgcggta taactgcata tcgccaacgt cacgacgttc acgacgcgga cgttcttcac
    10381 gatcgccacg cgggccacgg tcattacgat cgcgcggacc acggtcgtca cggtcacgga
    10441 attcacgctt aggacgcatc ggcgcatccg gcggcagaat cagcggacgc tcgccctgcg
    10501 ccattttcag cagtgcggcg gccagcgttt cgagatccag ctcttcacct tcggcagacg
    10561 gctggatttt cgccagcagc gcacggtact gatccagatc gctgctttcc agttgctgct
    10621 gaactttcgc ggcgaatttt tccagacggc gtttacccag cagttctgcg ttcggcagtt
    10681 ccacttctgg aatggtcagc ttcatggtgc gttcgatgtt gcgcagcaga cgacgctcgc
    10741 ggttctcaac gaacagcagc gcgcgaccgg cgcgacccgc acgaccggta cgaccgatac
    10801 ggtgaacgta ggactcggag tccatcggaa tatcgtagtt caccaccagg ctgatacgtt
    10861 caacgtccag accacgtgcc gcaacatcgg tggcgatcag gatgtccaga cgaccatctt
    10921 tcaggcgttc cagagtctgc tcacgcagcg cctggttcat atcgccattc aacgcggcgc
    10981 tgttgtagcc gttacgttcc agcgcttctg ctacttccag ggtcgcgttt ttggtacgta
    11041 cgaagataat cgccgcatca aagtcttccg cttccaggaa acgcaccagt gcttcgtttt
    11101 tacgcatacc ccagacagtc cagtagctct ggctgatgtc aggacgggta gtcacgctgg
    11161 actgaatgcg cacttcctgc ggctctttca taaagcggcg ggtaatgcga cgaatcgctt
    11221 ccggcatggt ggcggagaac agagcggttt gatgaccttc cgggatctgc gccataatag
    11281 tttcaacgtc ttcgatgaag cccatacgca gcatttcgtc ggcttcatcc agcaccagac
    11341 cactcagttt agagaggtcg agggtgccgc gttttaagtg atcaagcaga cgtcccggcg
    11401 taccgacaac gatctgcggc ccctgacgca gggcgcgtaa ctgcacgtca taacgctgac
    11461 cgccgtacag ggcaaccacg tttacgccgc gcatgtgttt agagaaatcc gtcatggctt
    11521 cggcaacctg taccgccagt tcgcgggttg gcgccagcac cagaatctga ggtgccttca
    11581 gctcaggatc aagattgttg agcagcggta aagagaacgc tgcggttttg ccgctaccgg
    11641 tctgggccat gcccagcacg tcgcgaccgc ccagcagatg cggaatgcac tctgcctgga
    11701 ttggagatgg tttttcgtaa cccagatcgg taagggcttc aaggatagga gccttcagcc
    11761 ccagatctgc aaaagtggtt tcgaattcag ccatgtagta cgtgtgcctc aaaattaatg
    11821 gcggccagtc tacataactc atcatgaaat tgatctgcaa ttttcattga aaagtgtgaa
    11881 ccggctcaaa gtaggtgtat taacgaacaa caacgccctc acccgcgaag gtgatggcaa
    11941 tcaaaaagat tacgggctga tatgttcgtc agctattgct ggtccgattc tgccaggtca
    12001 tcttggtcct ggcccaggag cgataattcc aacaatgcgt atcggtgctc aacaaagtta
    12061 tgaacgttgt tggccaccgc cagtttgaac agagccgtgg cgctgtccaa atcccccaga
    12121 cttaggtaat acttacctaa atagaagttg gtttcactga gatgctcagc gagcgaggtg
    12181 ttatccgttg cgtccgcctt gagcctttcc atcagcgttg cttcgctaat gtcgcccagg
    12241 tagaactcga caatgttcca tccccattgc tctttatccg atttttcgaa gcgtgctttt
    12301 aacgcttctt tcgcctgctt ctcattaagc ttctgctcaa caagatacag ccacaggctg
    12361 cggtaaggat cattgggatc gtcttgataa aacgccagca gatcatcttg cgctaactta
    12421 tcacggccgc cgtaatacaa tgcgataccg cggtttaagt gcgcgtagtt gtaagttgga
    12481 tcaagctcta gtacagaatc aaacgcttca taggcagcat caaaattgcc tgcctgcgtt
    12541 aaataaatgc ctaagtaatt gaatacttca ggcatatccg gtctgattgc cagcgcttgt
    12601 gaaaaatcat ttcgcgctaa tgccctcaaa ccaagactat catacaacac tccgcgctca
    12661 tataaaagct gtgcgcgttc gtcatcggtt aaagcccgac tggcaagaat ctgttccata
    12721 cgcgccagaa tcacttcctg ctgtaaagtc ggttgcaatg gtactgcgag gacttcactt
    12781 ttacgccagg cggaattact gcatcctgca agcgtaagtg ctgtcgcaac gaaacaccag
    12841 cgcaaaaaag gcttcatttc ccactcccga agacaacgat tgaatgaacg tcctgttccc
    12901 cggtggctca acaaggcgtc cagccaggtc taaagccccc cgcactgcgg agggcaaaag
    12961 gctaccttac tcggcctgtt cgctcgccgg agcttccggc gcagccgcag gttgagactg
    13021 ctcggttgct tctttaatgc tcagacgtac acggccctgg cggtcaactt ccagaacctt
    13081 aaccgggact tcctgaccca tctgcagata atcggtcact ttctctacac gcttatccgc
    13141 gatttgagag atgtgaacca gaccttcttt accgccgccg atggcaacaa acgcgccaaa
    13201 gtcaacgata cgggtcactt tactattgta gatacggccg acttcgatct ctgcggtgat
    13261 ctcttcgata cgacggatag cgtatttcgc tttttcaccg tcggtcgccg cgatcttcac
    13321 agtaccgtca tcttcaattt cgatggtggt gccggtctct tcagtcagcg cgcggatcac
    13381 agaaccgcct ttaccgatca cgtctttgat cttgtccgtg ctgatcttga tggtatggat
    13441 acgcggcgca aattcagaga tatcgccgcg cggcgcgttg atcgcctgtt ccatcacgcc
    13501 caggatgtgc agacgcgcac ctttagcctg gttcaacgca acctgcatga tctctttggt
    13561 gataccttca attttgatat ccatctgcag cgcagagata ccgtcgcggg aacccgccac
    13621 tttgaagtcc atatcgccca ggtgatcttc gtcgcccaga atgtcagaca gtacaacgta
    13681 gttgtcgcct tctttcacca gacccatagc gatacctgct acggcggctt taattggcac
    13741 gccagcgtcc atcagcgcca gagaagcgcc gcacacggaa gccatagaag aagaaccgtt
    13801 ggattcggtg atttcagaca ccacgcgaac ggtgtacggg aatttatcca tgtccggcat
    13861 cactgccagc acgccgcgct tcgccagacg accgtgacca atttcacgac gcttcggaga
    13921 accgaccatg ccggtttcgc ctacggagta cggagggaag ttgtagtgga acaggaagct
    13981 gtcagtgcgc tcgcccatca gttcatcaag cacctgcgcg tcacgggcag tacccagagt
    14041 cgcggtaacc agcgcctgcg tttcaccacg ggtaaacaga gcggaaccgt gagttcgcgg
    14101 cagtacgcca gtgcgcacgt ccagaccacg gatcatgtct ttttcacggc catcaatacg
    14161 cggctcgcct gccagtacgc ggctacgtac cacgtttttc tcgatggcgt gcaggatttc
    14221 acccagctcg ttagcatcca gagtttcatc ttctgcaata agctgctcga tggtttcgga
    14281 tttgattacg tcaacctgag catagcgctc ttgtttatcg gtgatgcggt acgcgtcgct
    14341 cagacgagat tcagccagcg cagcaacacg cgcgttcaac gcgtcgttga cggcttccgg
    14401 ctgccagtcc caacgcggtt taccggcttc tttcaccaga tcgttgatcg cctggataac
    14461 aacctgctgc tgctcgtgac cgaataccac cgcgcccagc atagtgtctt cgctcagcag
    14521 ttcagcttcg gattccacca tcagcacagc cgcttcggta ccggcaacca ccaggtccag
    14581 cttgctttct ttcagctcgt cctgggtcgg gttcagtacg tactggtcat tgatgtaacc
    14641 tacgcgcgcc gcgccgattg ggccgttgaa cggaatgccg gacagcgaca gcgcagcgga
    14701 tgcgccgatc atcgccacga tatccgggtt aacctgcggg ttaacggaaa cgacggtcgc
    14761 aataacctgc acttcgttaa cgaaaccttc cgggaacagc ggacgaaccg ggcggtcaat
    14821 cagacgcgcg atcagggttt cgccttcgct tggacggcct tcacgacgga agaagctgcc
    14881 cgggatacga ccagcagcgt aggtacgctc ctgatagtta acggtcagtg ggaagaagtc
    14941 ctggcctggc ttggcttttt tctggccgac aacggtaacg aatacggcgg tgtcatccat
    15001 gcttaccata acagcggcag tggcctgacg cgccatcatg ccagtttcca gcgtaacggt
    15061 atgctggccg tactggaatt cacgaacgat cggattaagc aaaataatat cctttccaat
    15121 ttttgacggc acaatacgcg ccgtcgttaa tacccgatct tctgcgcatc ctcgcgacta
    15181 atgacaaccc taaccctgat atgggtaaag cctctcatta gccgcgcgaa cctctgcaac
    15241 ggaagatcat tcatagcaac aatacattag tttccagcga attgctgcca tctgctggaa
    15301 aaaaggggcc atgaaggccc cctctttctg aaactcgaaa gaattagcga cgcagaccca
    15361 gacgctcaat cagcgcggtg tagcgtgcaa catctttacg tttcaggtag tcgagcagtt
    15421 tacgacgctg agaaaccata cgcagcagac cacgacggct gtggtgatct tttttatgct
    15481 ctgcaaagtg accctgcagg tggttaatct gtgcagtcaa cagagcaacc tgaacatcgg
    15541 tagaaccggt gtcgtttgcg tcacgaccga actcagaaac gattttagct gtagcttcag
    15601 tacttagaga cattttaaaa ctccaaagta tttaagaatg agaggacgcc gatctctaat
    15661 tcagcgatcc cagtgtacgc cgcgtaaact gttaaataat ttacgcgacg ttaagcggcg
    15721 gtattctact cgcagcgctc tcttatcgca agacgaagcg acattacgcc gggtactcta
    15781 ctaccagccg acgaggcgcg acacggcctt cgtcgtcaat ttcgcccata ccgataaatt
    15841 tatcgtcttc accttccgtc acacgaacca gtcccttcaa cggcgcgccc gtggtacgaa
    15901 ccgggttgcc atttttgaag tataccgaag atgttaacgg cagattaaca acaggatagt
    15961 ccgaagccgg actatccatt ggcatcaata atggatcgag caactgcgcc gccggaacgc
    16021 cctgctgttc cgcctgtgct accagcgtct gcaagtgctc cagcgtcacc atacgatcca
    16081 ccggatactt gctgaccgtc agacgacgca ggtacgttac gtgcgcgcca cagcccagtt
    16141 tctcacctaa atcatcaata atagtgcgaa tataggtgcc tttggagcaa tgaacttcca
    16201 gctccagctc gttaccttca tggcgaataa acagcagctc atagacggta atcgggcggg
    16261 cttcgcgcgg cacttcgata ccctggcggg catattcgta cagcttcctg ccctgatact
    16321 tcagcgccga atacatcgag ggaatctgtt cgatatcccc acgaaaggtc tccagcgcgc
    16381 tcgcaagctg ctcagcgctg aaagtcaccg gacgctcctg cacgatttga ccatcggcgt
    16441 cagaggtatc tgtgcgctgc cccagacggg caataacacg atagcgtttg tcagaatcca
    16501 gcaagtactg cgaaaatttt gtcgcttcgc cgaggcaaat cggcaacatg ccggtcgcca
    16561 gcgggtccag cgcgccggta tgcccggcgc ggttggcatt gtagatgcgc ttaactttct
    16621 gcagcacgtc attgctggac ataccctgcg gcttatccag caacagaacg ccgtgaatgt
    16681 cgcggccacg acgacgagga cgactcatca gtcctccttg ctgtcgtccg ggttcacacg
    16741 acgttcttcg tcatgtttca ccacgttagt caccaggttg gacatacgca tcccttccac
    16801 cagcgagtta tcgtagaaga aggttagttc cggcacgatg cgcagacgca tcgctttacc
    16861 cagcaagctg cggatgaaac cagacgcttc ctgcagggcc ttaatgccgt ttttcacagc
    16921 cgcttcgtcc tgatcgttga ggaacgtcac gaatactttg gcgtatgcca gatcgcggga
    16981 catttcaaca cccgatacgg tggtcatcat acctacacgt ggatctttga tttcgcgttg
    17041 caggatgagc gcgatctctt tctgcatctc ttgcgctacg cgctgcgggc gaccaaattc
    17101 tttcgccata ataaattctc cagaataaag acaaaaaagg ggccataagc ccctttttaa
    17161 atttcttgcc gggtggcgct tcgcttaccc ggcctacgcc taatcatctt ctaaggattt
    17221 tggattgcaa caaggcggca agctcgtaaa tccccgggag catagataac tatgtgaccg
    17281 gggtgagcga gcgcagccaa cgccgttgcg gcccaaaaga cgacgaagat taagcgatgg
    17341 tacgttggat ctcgataatc tcgaacactt caatcatatc gccaacgcga acgtcgttgt
    17401 agttcttcac gccgatacca cattccatgc cgttacggac ttcgttaacg tcatctttga
    17461 agcggcgcag ggattccagc tcgccttcat agataaccac gttgtcgcgc agtacgcgga
    17521 ttggattatg gcgtttaatt gtaccttcgg taaccataca gcccgcgatc gcgccgaatt
    17581 tcggcgattt gaacacatcg cgcacttcag ccagaccgat gatctgctgt ttcagttccg
    17641 gagacagcat gccgctcatc gccgctttca cttcgtcgat caagttatag atgacggagt
    17701 agtaacgcag atccagactt tcggattcaa tcactttacg cgcagaagca tcagcacgaa
    17761 cgttgaagcc caccagaatc gcgttggacg ccgcagccag ggtcgcgtcg gtttcggtga
    17821 taccacctac gccagaaccg atgatcttca ctttcacttc gtcggtagac agtttcagca
    17881 aggagtcgga gatcgcttcc acggaaccct gtacgtcagc cttcagcacg atgttcactt
    17941 cgtgaacttc gccttcggtc atgttgacga acatgttctc gagtttagat ttctgctgac
    18001 gagccagttt aacttcacgg aatttaccct gacgatacag agcaacttca cgcgctttct
    18061 tctcgtcgcg aaccacggtc acttcgtcac cggcagccgg aacgccggac aggccgagga
    18121 tttccaccgg aatggacgga cccgcttcca gcacttcctg acccagttcg ttacgcatcg
    18181 cacgcacgcg gccgtattcg aagccacaca gcacgatatc gcccttatgc agcgtacctt
    18241 cgcgtaccag aacggtagcc accggaccac gacctttatc caggaaggat tcgatcaccg
    18301 cgccgctcgc cataccttta cgaaccgctt tcagttccag aacttcggcc tgcagcagga
    18361 tagcgtcaag cagttcgtcg ataccggtgc ccgctttcgc agacacgtga acgaactggc
    18421 tctcgccgcc ccactcttcc ggcagaatgc cgtactggga cagttcgttc ttcacacgat
    18481 ccggatccgc ttccggctta tcgattttgt tcaccgcaac cacgaccggc acacctgccg
    18541 ctttcgcgtg ctggatagct tcgatagtct gcggcatcac gccgtcgtct gctgcaacaa
    18601 ccagaaccac gatatccgtt gcctgagcac cacgagcacg catggaggta aacgcggcgt
    18661 ggcccggggt gtccaggaag gtgatcatcc cgttgtcagt ttcaacgtgg taagcaccga
    18721 tgtgctgggt aatgccaccc gcttcgccag aggccacttt cgtggaacga atgtagtcca
    18781 gcagagaggt tttaccgtgg tcaacgtggc ccatgatggt cacaaccggt gcgcgcggtt
    18841 cagccgcagc gccggtatca cggtcgctca ttaccgcttc ttccagttcg ttttcacgac
    18901 gcaggataac tttgtggccc atctcttcgg caaccagctg tgcggtttcc tggtcgatga
    18961 cctggttgat ggtggccatg gcgcccagct tcatcatcgc tttgatgacc tgagaacctt
    19021 tcaccgccat cttgttcgcc agttcgccga cggtgatggt ttcaccgatc accacgtcac
    19081 ggttaacggc ctgagcgggc ttctggaagc cttgctgtaa agaagaccct ttacgcttgc
    19141 cgcctttacc gccgcgaacc gcagcacgcg cttcttcgcg atcggctttg gattcggcat
    19201 gtttgccttt tttcgccgga cgcgccgctt ttgcattacg gccacgacca cgaccacctt
    19261 ctacttcacg atcgttttcg tcttcggcct ggcgcgcgtg ctgagaagtg gtgacatgat
    19321 agtcactggt gtcttctact ggctcaggcg ttgcggtcca tttgttttct tccgccatgc
    19381 ggcgagcttc ttctgctaca cgacgcgctt cttcttcgag tttgcgacgt gcttcttctt
    19441 ccgctttacg cttcagctct gcagcttcat tctcacggcg ggctttttcg gcctgggcgg
    19501 ttttggtcat atcgtcagtc tgttgattgc tcactttgtc tttttccgca gcttcacgtt
    19561 tcgctttttc agcggcttca cgcttagctt gttctgcggc ctcgcgttca gctttttgtt
    19621 gcgcctcgcg tttggcctgt tcttctgcct cacgacgggc ttgctcttcc gcttcacgct
    19681 gcgcctgctc ttccgcggcc aggcgttcag cctcttgcgg atcgcgtttc acaaaggtgc
    19741 gcttcttgcg gacttcgatt tgtaccgatt tactttttcc accggtacca ggaatattca
    19801 gggtgctgcg cgttttacgc tgcagcgtca atttatcggg gccagaaacc gcttcgcggt
    19861 tcaggtgcgc cagtaaagtc tgtttttctt gtgcggacac agagtcgtca gcagatttcc
    19921 ggatacctgc atcagcaaac tgctgtacca ggcgatccac ggaaacctgt ctctctgcgg
    19981 ccagcgcttt tagggttaaa tctgtcatgc tgttccttcc tgctacagtt tattacgctt
    20041 cgtcgccgaa ccagcaaata ttacgggcag ccataatcag ctcaccggct ttttcgtcgg
    20101 tcaacccttc gatatcagcc agatcatcaa tgccctggtc ggcgagatct tccagcgtac
    20161 aaacaccacg agccgccagt ttgaaagcca tatcgcgatc taatccttcc agattcagca
    20221 gatcgtcagc cggtttgtta tcacctaggc ttgcttcctg gtcctgcgcc agagtggcca
    20281 gtgcgttttt agcacgctcg cgcagtgctt caacggtcgg ctcatcaagg ccgtcaattt
    20341 ccagcagttc tttcattggc acataggcca gttcttcgag cgtggagaaa ccttcttcta
    20401 ccagaacggt cgcgaactct tcatcaatat caagatattt agtaaagatc tcgatagcgg
    20461 catgtgcttc agcctgatgt ttagcctgca agtcatcaac ggtcattacg ttgagttccc
    20521 agccgctcaa ttgcgaagcc aagtggacgt tctgaccatt acgtccgatc gcctgcgcca
    20581 gattaccggc ttcaacggcg atatccatgg tatgtttatc ttcgtccacc acgatagacg
    20641 cgacatctgc cggcgccatc gcattaatga cgaactgcgc cgggttatca tcccacagca
    20701 cgatatcgat acgctcaccg cccagttcgg tagagaccgc ctgaacgcgc gcgccgcgca
    20761 tccccacgca agcgccgacc ggatcgatac gcttatcgtt ggttttcact gcgattttcg
    20821 cacgagaacc cggatcgcga gccgccgctt taatttcaat cacttcttcg ccgatttccg
    20881 gcacttcgat gcggaacagc tcgatcagca tttccggctt ggaacgggtg acgaacagct
    20941 gcgcgccacg cgcttccggg cgaacagcat acagcacgcc gcgaatacgg tcgccagggc
    21001 ggaagttttc gcgcggcagc atatcttcac gcagaatcac cgcttcagcg ttaccggcca
    21061 tcccttcgga tttaatttcc aaagagatat tgtcgcggtt cactttcttc accacgccag
    21121 tgacgatttc gccttcctgg tcgcggaact gatcgacaac catcgcgcgt tcagcttcac
    21181 ggactttctg cacgataacc tgtttcgcag tctgcgtggt gatacggtca aaggtgacag
    21241 attcaatctg atcttcaaca tagtcgccga cattcaggct ttcgtcttca aagcgcgccg
    21301 cttccagcgt aatttccttc gtcggcatgg tcacttcttc aacgatcaac caacggcgga
    21361 aagtatcaaa atcaccgctt ttacgatcga tttctacacg aacatcgatc tcctgctcat
    21421 attttttctt tgttgctgtc gccagcgcac tttccagcgc ttcaaaaatt ttttcgcgtg
    21481 gcagcgcttt ttcgttggag acggcttcaa caacagccaa aatttctttg ttcatcgcgg
    21541 gcttttcacc tcatccagac tgttaaaagt ggggaaccag gttcgccttc tggatattac
    21601 tcagcgcgaa cacttcatct ttgccttcga ctgtgacggt aatcatttca ccgtccaccg
    21661 ctttgataat gccctgccac ttgcgacggt tctgtaccgc catgcgaaga accagcgcga
    21721 cctcttcacc ctggaaacgc gcataatgat cggcagtgaa cataggacgg tcgagacccg
    21781 gtgacgagac ttcaaggttg taagccacgg agataggatc ttcaacgtcc agcaccgcgc
    21841 ttacctggtg gctcacatca gcacaatcat caacattgat gccatcttca ctatcaatat
    21901 agatgcgcag tgtggatgtg cgaccgcgaa taaattcgat gccgaccagc tcgtagccta
    21961 aggcttcaac tggcgctgta atcatctctg ttaatttttg ctctaatgtg gacaagccca
    22021 cccccaagac ataaaaaaag ggcctaaagc ccagttattc tgtagtcaga taacaaaaaa
    22081 ccccgataaa tcggggcttt agataactga accctataac cgcaacggcg gtctggtgta
    22141 ccttccgaaa gaattttttt caaatccagc tacgaaggac ataatcttca cagtatattt
    22201 gaaaaagaac tctaagggaa agtggttgcg ggggccggat ttgaaccgac gaccttcggg
    22261 ttatgagccc gacgagctac caggctgctc caccccgcgc ctgaaacgtg gcaaattcta
    22321 ctcgttttgg gcaaaatttg caaatactgc tgggatttgg taccgaggac gggacgtaaa
    22381 atctgcgcac agtatagtga ccaggcatga gttatgtcaa ccctattccc aatatgcaga
    22441 tgaatgaata tcactcttcg ttatactcat cccacctctc ctgcttatac acgcatttca
    22501 caacgttatt tcagtaaacc ttcactaaat gcttcctgtc tctgctaaaa gatgattaaa
    22561 tgaaaactca tttattttgc ataaaaatgc actaaagcag aaaccgatct cattatcagt
    22621 caatcaagca gggttctatt ctatgacgac gattcttaag catcttccag caggtcaacg
    22681 tattggtatc gctttttccg gcggtctgga cactagcgcc gcgctgctgt ggatgcgaca
    22741 aaaaggagct gtcccatatg cctatactgc gaatctggga caaccggatg aggatgacta
    22801 tgacgccatt cctcgtcgcg caatggagta tggcgcagag aatgcccgcc tgattgattg
    22861 ccgcaagcag ttggttgcag aagggatcgc agcgattcag tgcggcgctt tccataatac
    22921 gactggcgga ctgacctatt tcaataccac gccgctgggc cgtgccgtga ccggcacgat
    22981 gctggtcgcc gcaatgaaag aagacggcgt gaatatctgg ggcgacggca gcacctataa
    23041 aggcaacgat attgaacgtt tctatcgtta cggcctgctg accaacgccg agctgcagat
    23101 ttacaaaccg tggctggata ccgactttat cgatgagctg ggcggccgtc atgagatgtc
    23161 tgaatttatg attgcctgcg gtttcgacta taagatgtca gtcgaaaaag cctactccac
    23221 cgactccaac atgctcggcg cgacgcacga agcgaaagat ctggagtttc ttaactccag
    23281 cgtcaagatc gtcaacccga ttatgggcgt gaagttctgg gacgaaagcg tgaagatccc
    23341 ggcagaagag gtgaccgtcc gtttcgaaca gggacatcca gtggcgctga acggtaaaac
    23401 cttcagcgat gatgttgaga tgatgctgga agcgaaccgc atcggcggac gtcacggcct
    23461 gggcatgagc gaccagatcg aaaaccgtat cattgaagcg aaaagccgcg gtatttatga
    23521 agcccccgga atggcactgc tgcacatcgc ttacgagcgt ctgttgaccg gtattcacaa
    23581 cgaagacacc attgaacagt atcattctca tggtcgtcag ttgggtaaac tgctgtatca
    23641 gggtcgctgg ttcgactctc aggcgctgat gctgcgtgac ggcctgcaac gttgggtcgc
    23701 cagccagatt accggtgaag tgacgttgga gctgcgtcgc ggcaacgact actccatcct
    23761 gaacaccgtg tcagacaacc tgacctataa ggctgagcgt ctgaccatgg agaaaggcga
    23821 gtccgtgttc tcgccagacg atcgtatcgg tcagttgacc atgcgtaatc tggacattac
    23881 tgatacccgc gagaaactgt tcggctacgc gaaagcgggt ctgttaaccg cctcttccgc
    23941 gaccggtctg ccgcaggttg agaatctgga aaacaaagcg aagtaaacat ttatcattct
    24001 aaggccgcga aagcggcctt ttttatgcgc ggaatataag gtgtctatag gcctgataaa
    24061 cgtagcgtca tcaggcgttg taataatgtc ggatggcggc gtaaacgcct tatccgacct
    24121 acagaaaatc acaaataaca gacgaaaaaa aagacgcttt tcagcgtctt tctttcggaa
    24181 tattggtacc gaggacggga cttgaacccg taagccctat taggcactac cacctcaagg
    24241 tagcgtgtct accaattcca ccacctcggc acggatactg ctattagcgc gggatatcgc
    24301 tggtcggctg ggccggtgca gcaggttgag tctgctcggt tttcgccggc gcgctcagat
    24361 tttcccactc gcttccttta ttggttttgt tgctattgat attacccaac accagactga
    24421 tgatgaagaa cagcgtcgcc aataccgccg tcattcgagt catgaagtta ccagaaccac
    24481 ttgaaccaaa tagcgtagcg gaagcgcctg ctccgaagga ggctcccata tcagcgcctt
    24541 taccttgctg cagcatgatc agacctacaa ggccaattgc cacaataagg aaaacaacta
    24601 aaagagcttc gtacataatc aacctgttcc ttgcggagtt gccgcgtacc aatgcttcta
    24661 ccaataaagc gggattttta ctgtttccca ctgaagcggg tgtgaatact aaccaaagcg
    24721 aatgaccttc gcaagggcaa tttaagcgca ttgtatcaac tgcggaaaaa aacagcaaaa
    24781 gcgttgtttt ttgcgggcag taaggcggca accgccgcct ttttagtcac ttaaacgctt
    24841 aaacggcttt taccgcatcc gcgatacgat gggcgaaagc cgtaacctgc gcttcatcct
    24901 cgccttcaac catcacgcga atcagcggtt cggtaccgga tttacgtagc agtacccgcc
    24961 cacgattgcc gagcgtggct tctacgtccg ccgttaccgc tttcaccgct tcattttcca
    25021 gcggatcgcc gctaccagcg gtgtaacgca cgttaaccag aatctgcggg aacattttca
    25081 ttccgctgca cagatcgtgc agactcatat gattacgcac catcgccgcc agaacttgta
    25141 gccccgccac aataccgtcg ccagtggtcg ttttatccag cagaataacg tgaccagagt
    25201 tttccgcgcc gatgcgccag cctttttcct gcaatttttc cagcacatag cggtcgccca
    25261 ctttcgcccg ggcaaacgga atgccaagct gcttgagcgc cagctccagc cccatattgc
    25321 tcatca
//
LOCUS       DAGWFR010000050        25074 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.051, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000050 DAGWFR010000000
VERSION     DAGWFR010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 25074)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25074)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25074
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.051"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..567
                     /locus_tag="MOX77_002051"
     CDS             <1..567
                     /locus_tag="MOX77_002051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HCA3357588.1"
                     /translation="SPFVLIFHELGDTFVANALNIVVLTAALSVYNSCVYCNSRMLFG
                     LAQQGNAPKALLNVDKRGVPVSSILVSAVVTALCVLLNYLAPESAFGLLMALVVSALV
                     INWAMISLAHMMFRRAKQQQGVKTRFPALFYPFGNVLCLLFMAAVLIIMLMTPGMAIS
                     VWLIPVWLLILGVGYLCKEKTAKTVKAH"
     gene            731..2137
                     /locus_tag="MOX77_002052"
     CDS             731..2137
                     /locus_tag="MOX77_002052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3357589.1"
                     /translation="MDKGRLSVREKIGYGMGDAGYNIIFGAIMLFVNYFYTDIFGLAP
                     ALVGVLLLSVRVIDAVTDPVMGALADRTQSKYGRFRPWLLWIAFPYALFSVLMFTTPD
                     WGYNSKVIYAFVTYFLLSVTYTAINIPYCSLGGVITNDPKERVACQAYRFVLVGIATL
                     LLSLTLLPMVDWFGDGDKAKGYQLAMTVLAIIGMGMFLFCFASVRERVRPAVPTHDDM
                     KNDFKDVWKNDQWVRILLLTLCNVCPGFIRMAATMYYVTWVMGQSTHFATLFISLGVV
                     GMMIGSMLAKVLTDRWCKLKVFFWTNIALAIFSCAFYFFDPKATVMIVALYFLLNILH
                     QIPSPLHWSLMADVDDYGEWKTGKRITGISFSGNLFFLKLGLAIAGAMVGFLLSWYGY
                     DASAKAQSASAMNGIMLLFTVILGVGYLITAGVVRLLKVDRELMKKIQDDLEKRRTNY
                     RELSELQELKAAESVRKA"
     gene            2137..3087
                     /locus_tag="MOX77_002053"
     CDS             2137..3087
                     /locus_tag="MOX77_002053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="family 43 glycosylhydrolase"
                     /protein_id="HCA3357590.1"
                     /translation="MANWPNPFIEQRADPFILRDGSDYYFIASVPEYDRLEIRRADSL
                     EGLRAADPVVVWRKPESGPMSQLIWAPEMHRINGKWYIYFAATHTQALDKLGMFQHRM
                     FALECADADPLTGKWTEKGQIKTPFDTFSLDATTFYHQGKQWYLWAQKAPDIAGNSNI
                     YLAELENPWTLKGEPVRLSKPEYDWECRGFWVNEGPAVVVHGDKLFISYSASATDENY
                     CMGLLWINVNDDPRDPANWHKSPRPVFTTSYENRQYGPGHNSFTQTSEGEDVLVYHAR
                     NYTEIEGDPLYDPNRHTRLKRVRWDENGMPDFGVPPADTI"
     gene            complement(3179..4033)
                     /gene="ampE"
                     /locus_tag="MOX77_002054"
     CDS             complement(3179..4033)
                     /gene="ampE"
                     /locus_tag="MOX77_002054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-lactamase regulator AmpE"
                     /protein_id="HCA3357591.1"
                     /translation="MTLFTTLLVLIVERLFKLGEHWQLDHRLEALFRRITHFSMLRTM
                     GMTAIAMVVTFLLLQALKGLLFNVPTLVVWILLGVLCIGAGKVRVHYHAWLKAASRND
                     PHPCEAMASELTLIHGVPPDCNEREFLRELQNALLWINFRFYLAPLFWFIVGGPWGPV
                     TLVGYAFLRAWQTWLARYQTPHQRLQSGIDAILHVLDWIPVRLAGVVYALLGHGEKAL
                     PAWFASLADLHTSQYQVLTRLAQFSLVREPHTDKVETPKAAVSMAKKASFVVVVIIAL
                     LTIYGALV"
     gene            complement(4030..4593)
                     /gene="ampD"
                     /locus_tag="MOX77_002055"
     CDS             complement(4030..4593)
                     /gene="ampD"
                     /locus_tag="MOX77_002055"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,6-anhydro-N-acetylmuramyl-L-alanine amidase
                     AmpD"
                     /protein_id="HCA3357592.1"
                     /translation="MLPDKGWLVEARRVPSPHYDCRPDDEKPSLLVVHNISLPPGEFG
                     GPWIDALFTGTIDPDAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSNY
                     QGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTRTLIACYPAIADNMTGHCNIAPD
                     RKTDPGPAFDWPRFRALVALSSHKEMT"
     gene            4681..5574
                     /gene="nadC"
                     /locus_tag="MOX77_002056"
     CDS             4681..5574
                     /gene="nadC"
                     /locus_tag="MOX77_002056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HCA3357593.1"
                     /translation="MPPRRYNPDDRRDALLERINLDIPAAVAQALREDLGGEVDAGND
                     ITAQLLPADTQAHATVITREDGVFCGKRWVEEVFIQLAGDDVRLTWHVDDGDAIHANQ
                     TVFELNGPARVLLTGERTALNFVQTLSGVASEVRRYVGLLAGTQTQLLDTRKTLPGLR
                     TALKYAVLCGGGANHRLGLTDAFLIKENHIIASGSVRQAVEKAFWLHPDVPVEVEVEN
                     LDELDDALKAGADIIMLDNFNTDQMREAVKHVNGQARLEVSGNVTAETLREFAETGVD
                     FISVGALTKHVRALDLSMRFC"
     gene            5796..6233
                     /gene="ppdD"
                     /locus_tag="MOX77_002057"
     CDS             5796..6233
                     /gene="ppdD"
                     /locus_tag="MOX77_002057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase-dependent pilin"
                     /protein_id="HCA3357594.1"
                     /translation="MEKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQ
                     TFVPYRTAVELCALEHGGTSTCDAGVNGIPSPVITRYVSGMSVEKGVITLTGQESLSG
                     LSVIMTPAWDNANGITGWTRNCNIQSDSALQQACEDVFRFDAN"
     gene            6243..7628
                     /gene="gspE"
                     /locus_tag="MOX77_002058"
     CDS             6243..7628
                     /gene="gspE"
                     /locus_tag="MOX77_002058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspE"
                     /protein_id="HCA3357595.1"
                     /translation="MKDAQLNTLCQRHQAVLINSASNSITVAVVDAPSHALLDALHFA
                     TQKQIDIVCWTRQQMENHRHKPDQAPSTNAAKGGETAAQLLNQTLRSAMAKRASDIHL
                     EPGASRYRIRLRIDGVLHILQDIAKETGLALTARLKVLGNLDIAEHRLPQDGQFTVDL
                     TGDSISFRIATLPCKEGEKVVLRLLHQVEQTLDLDTLGMYGAQLTAFRQALQQPQGLV
                     LVTGPTGSGKTVTLYSALQTRNTPGINLCSVEDPIEIPLDGINQTQIHPRAGLTFQNV
                     LRALLRQDPDIIMVGEIRDGDTAEIAIKAAQTGHLVLSTLHTNSTSETLIRLQQIGVT
                     RWMISSALTLVVAQRLVRKLCPHCKQRLSDPVVLSPNLWPSALPRWQANGCQHCYHGF
                     YGRTALFEVLTVTPALRQLIASGASAQALEAHLQQTGTGTLFENGCRAVEQGMTSFEE
                     ILRVLGMPHER"
     gene            7618..8820
                     /gene="hofC"
                     /locus_tag="MOX77_002059"
     CDS             7618..8820
                     /gene="hofC"
                     /locus_tag="MOX77_002059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein transport protein HofC"
                     /protein_id="HCA3357596.1"
                     /translation="MSVKQLWRWQGVNDKGQLEQDVVWVDNRLALIITLQHQRIMPLR
                     IKRISVNAALWKEEQSAEIIHQLATLIHAGLTLSEGLELLAKQHPHRQWQALLRTLAH
                     ELEQGVPFSSALVSWPQVFPPLYQTMIRTGELTGKLAECCFELARQQKAQRQITVSVK
                     KALRYPAIILTMAALVVFAMLHFVLPEFAAIYRSFNTPLPLLTRGIIAIAQWGPAWGW
                     LILFLTMLVAIAHRRLKQKPSWQAQRQRLLLRLPVMGRLIRGQKLAQIFTVLALTQSA
                     GIPFLQGLESAIDSLGCPYWSQRLTQVHQEIAAGNPVWLALKNTQEFSPLCLQLVRTG
                     EASGSLDIMLHNLARHHSESTLALADNLASLLEPALLIITGLIIGTLVVAMYLPIFHL
                     GDAMSGMG"
     gene            complement(8851..9894)
                     /locus_tag="MOX77_002060"
     CDS             complement(8851..9894)
                     /locus_tag="MOX77_002060"
                     /EC_number="1.7.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008461816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GMP reductase"
                     /protein_id="HCA3357597.1"
                     /translation="MRIEEDLKLGFKDVLIRPKRSTLKSRSDVELERQFTFKHSGQTW
                     SGVPIIAANMDTVGTFEMAQALAGFDILTAVHKHYSVEEWAAFINTASADVLKHVMVS
                     TGTSDADFEKTVQILALNPALNFVCIDVANGYSEHFVQFVAKAREAWPSKTICAGNVV
                     TGEMCEELILSGADIVKVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGMIVS
                     DGGCTMPGDVAKAFGGGADFVMLGGMLAGHEESGGSVVEENGEKFMLFYGMSSESAMN
                     RHVGGVAKYRAAEGKTVKLPLRGPVGNTARDILGGLRSACTYVGASRLKELTKRTTFI
                     RVQEQENRIFNSL"
     gene            10120..10740
                     /gene="coaE"
                     /locus_tag="MOX77_002061"
     CDS             10120..10740
                     /gene="coaE"
                     /locus_tag="MOX77_002061"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HCA3357598.1"
                     /translation="MRYTVALTGGIGSGKSTVADAFADLGITVIDADIIARQMVEPGQ
                     PALNAIAEHFGSELIAADGTLRRRALRERIFSHPEEKAWLNALLHPLIQQETQRQFQQ
                     ATSPYVLWVVPLLVENRLYQKANRVLVVDVTPETQLIRTMQRDDVTREHVEHILAAQA
                     TREARLAVADDVIDNNGAPDAIASDVARLHASYLKLASQFVSQEKP"
     gene            10740..11483
                     /gene="zapD"
                     /locus_tag="MOX77_002062"
     CDS             10740..11483
                     /gene="zapD"
                     /locus_tag="MOX77_002062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapD"
                     /protein_id="HCA3357599.1"
                     /translation="MHTQVLFEHPLNEKMRTWLRIEFLIQQLSINLPIADHAGALHFF
                     RNISDLLDVFERGEVRTELLKELERQQRKLQAWVEVPGVDQDRIEALRQQLKSAGSVL
                     ISAPRIGQQLREDRLIALVRQRLSIPGGCCSFDLPTLHIWLHLQQAQRDAQIESWLAS
                     LNPLTQALTLVLDLIRNSAPFRKQTSLNGFYQDNGDDADLLRLMLTLDSQLYPQISGH
                     KSRFAIRFMPLDSENGLVPERLDFELACC"
     gene            11493..11684
                     /gene="yacG"
                     /locus_tag="MOX77_002063"
     CDS             11493..11684
                     /gene="yacG"
                     /locus_tag="MOX77_002063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase inhibitor YacG"
                     /protein_id="HCA3357600.1"
                     /translation="MSDVTVVNCPTCGKPVVWGEISPFRPFCSKRCQLIDLGEWAAEE
                     KRIASSGDQSDSDDWSEER"
     gene            complement(11681..12622)
                     /locus_tag="MOX77_002064"
     CDS             complement(11681..12622)
                     /locus_tag="MOX77_002064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001697068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCA3357601.1"
                     /translation="MKAGLIMRHDVMSVLHAFCMIAENHSFTRAAAQLHISTSALSQN
                     MRQLEDELGVKLLNRTTRRVGLTEAGHAFLASIRPALNHIDEAMEHACQSRDIPGGTL
                     RLTVPRTAATLLLQPNLAGFMRDYPDIRLDIDVNDGFVDLINERFDAGIRFGDAVQLD
                     MNVVPLGDVLRPAIVASPAYLARFGTPLHPQELINHRCLCHRFTRESGLYRWEFVHGA
                     QRLEITPEAALMVNDKALRLSAARDGAELTYVFEQDVHEDLQDGRLCSVLEEWLPAAD
                     RFYLYYPGRAHMAPKLRVFIDYFCHKAILPSQQSYHR"
     gene            12708..13697
                     /locus_tag="MOX77_002065"
     CDS             12708..13697
                     /locus_tag="MOX77_002065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001200034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HCA3357602.1"
                     /translation="MQYRTLGANGPRVSAIGLGCMGMSAFYGAHDDSTSIKTLHYALD
                     QGVTLLDTADMYGPYTNERLVGRAIADRRDRVFLATKFGIVLDPANPMARGVNGRPEY
                     VRRSCEQSLQRLGVDHIDLYYQHRVDPSVPIEETVGAMADLVREGKVRYLGLSEASTQ
                     TLERAHNVHPITALQSEYSLWSREAEISALSTCERLGIGFVAYSPLGRGFLTGTIKTP
                     EDFAANDFRRTNPRFMGENFSRNLRLAEAIKQMAREKECTPAQLALAWLLARNRHLVP
                     IPGTRHCARVDENLGALSLTLSPQELAAIEAVFPHDAAAGPRYWPEIMSTLNR"
     gene            complement(13731..14126)
                     /gene="mutT"
                     /locus_tag="MOX77_002066"
     CDS             complement(13731..14126)
                     /gene="mutT"
                     /locus_tag="MOX77_002066"
                     /EC_number="3.6.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000736055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-oxo-dGTP diphosphatase MutT"
                     /protein_id="HCA3357603.1"
                     /translation="MKKLQIAVGIIRNPNDEIFITRRAADAHMANKLEFPGGKIEAGE
                     TPEQALIRELQEEVGITPTQVTLFDTLEYQFPDRHITLWFWLVERWEGEPWGKEGQPG
                     RWIAQNALNTDDFPPANEPIIRKLRQFAP"
     gene            complement(14282..16987)
                     /gene="secA"
                     /locus_tag="MOX77_002067"
     CDS             complement(14282..16987)
                     /gene="secA"
                     /locus_tag="MOX77_002067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HCA3357604.1"
                     /translation="MLIKLLTKVFGSRNDRTLRRMRKAVSLINAMEPEMEKLSDDELK
                     AKTNEFRARIGKGESVESLIPEAFAVVREASKRVFGMRHFDVQLLGGMVLNDRCIAEM
                     RTGEGKTLTATLPAYLNALSGKGVHVVTVNDYLAQRDAENNRPLFEFLGMSVGINLPG
                     MPAPAKREAYAADITYGTNNEYGFDYLRDNMAFSPEERVQRKLHYALVDEVDSILIDE
                     ARTPLIISGPAEDSSEMYKKVNKIIPHLIRQEKEDSDTFQGEGHFSVDEKARQVNLTE
                     RGLVLIEELLVQEGIMDEGESLYSPGNIMLMHHVTAALRAHALFTRDVDYIVKDGEVI
                     IVDEHTGRTMQGRRWSDGLHQAVEAKEGVEIQNENQTLASITFQNYFRLYEKLAGMTG
                     TADTEAFEFSSIYKLDTVVVPTNRPMIRKDLPDLVYITEAEKIQAIIEDIKERTANGQ
                     PVLVGTISIEKSEVVSRELTKAGIKHNVLNAKFHANEAGIVAQAGYPAAVTIATNMAG
                     RGTDIMLGGSWQAEVAALEAPTEEQIAQIKADWQVRHDAVLAAGGLHIIGTERHESRR
                     IDNQLRGRSGRQGDPGSSRFYLSMEDALMRIFASDRVSGMMRKLGMKPGEAIEHPWVT
                     KAIANAQRKVESRNFDIRKQLLEYDDVANDQRRAIYTQRNELLDVSDVSDTINSIRED
                     VFKATIDAYIPPQSLEEMWDIPGLQERLKNDFDLEMPIAEWLDKEPELHEETLRERIL
                     AQSIEVYQRKEEVVGAEMMRHFEKGVMLQTLDSLWKEHLAAMDYLRQGIHLRGYAQKD
                     PKQEYKRESFAMFAAMLESLKYEVISTLSKVQVRMPEEVEAMEMQRREEAERLAQMQQ
                     LSHQDDDAAVAADLAAQTGERKIGRNDPCPCGSGKKYKQCHGRLS"
     gene            complement(17049..17546)
                     /gene="secM"
                     /locus_tag="MOX77_002068"
     CDS             complement(17049..17546)
                     /gene="secM"
                     /locus_tag="MOX77_002068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308128.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="secA regulator SecM"
                     /protein_id="HCA3357605.1"
                     /translation="MSGILTRWRQLGRRYFWPHLLLGMVAASFGLPALSNAAETNTPA
                     RTTASTASKVNFSHLALLEASNRRPNFTVDYWHQHAIRTVIRHLSFAMAPQTLPVADA
                     PSPLQAHHIALLNTLSAMLTQEGTPPAIVRRLSLAYFAPQTAFSIPAWISQAQGIRAG
                     PQRLS"
     gene            complement(17828..18745)
                     /gene="lpxC"
                     /locus_tag="MOX77_002069"
     CDS             complement(17828..18745)
                     /gene="lpxC"
                     /locus_tag="MOX77_002069"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HCA3357606.1"
                     /translation="MIKQRTLKRIVQATGVGLHTGKKVTLTLRPAPANTGVIYRRTDL
                     NPPVDFPADAKSVRDTMLCTCLVNEHDVRISTVEHLNAALAGLGIDNIVIEVNAPEIP
                     IMDGSAAPFVYLLLDAGIDALNCAKKFVRIKETVRVEDGDKWAEFRPYNGFTLDFTID
                     FNHPAIDSSSQRYAMNFSADAFMRQISRARTFGFMRDIEYLQSRGLCLGGSFDCAIVV
                     DDYRVLNEDGLRFEDEFVRHKMLDAIGDLFMCGHNIIGAFTAYKSGHALNNKLLQAVL
                     AKQEAWEFVTFQDDAELPLAFKAPSTVLA"
     gene            complement(18846..19997)
                     /gene="ftsZ"
                     /locus_tag="MOX77_002070"
     CDS             complement(18846..19997)
                     /gene="ftsZ"
                     /locus_tag="MOX77_002070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015965916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HCA3357607.1"
                     /translation="MFEPMELTNDAVITVIGVGGGGGNAVEHMVRERIEGVEFFAVNT
                     DAQALRKTAVGQTIQIGSGITKGLGAGANPEVGRNAADEDREALRAALEGADMVFIAA
                     GMGGGTGTGAAPVVAEVAKDLGILTVAVVTKPFNFEGKKRMAFAEQGITELSKHVDSL
                     ITIPNDKLLKVLGRGISLLDAFGAANDVLKGAVQGIAELITRPGLMNVDFADVRTVMS
                     EMGYAMMGSGVASGEDRAEEAAEMAISSPLLEDIDLSGARGVLVNITAGFDLRLDEFE
                     TVGNTIRAFASDNATVVIGTSLDPDMNDELRVTVVATGIGMDKRPEITLVTNKQVQQP
                     VLDRYQQHGMAPLTQEQKTVAKVVNDNAPQAAKEPDYLDIPAFLRKQAD"
     gene            complement(20058..21320)
                     /gene="ftsA"
                     /locus_tag="MOX77_002071"
     CDS             complement(20058..21320)
                     /gene="ftsA"
                     /locus_tag="MOX77_002071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HCA3357608.1"
                     /translation="MIKATDRKLVVGLEIGTAKVAALVGEVLPDGMVNIIGVGSCPSR
                     GMDKGGVNDLESVVKCVQRAIDQAELMADCQISSVYLALSGKHISCQNEIGMVPISEE
                     EVTQEDVENVVHTAKSVRVRDEHRVLHVIPQEYAIDYQEGIKNPVGLSGVRMQAKVHL
                     ITCHNDMAKNIVKAVERCGLKVDQLIFAGLAASYSVLTEDERELGVCVVDIGGGTMDI
                     AVYTGGALRHTKVIPYAGNVVTSDIAYAFGTPPSDAEAIKVRHGCALGSIVGKDESVE
                     VPSVGGRPPRSLQRQTLAEVIEPRYTELLNLVNEEILQLQEQLRQQGVKHHLAAGIVL
                     TGGAAQIEGLAACAQRVFHTQVRIGAPLNITGLTDYAQEPYYSTAVGLLHYGKESHLN
                     GEAEVEKRVTASVGSWIKRLNSWLRKEF"
     gene            complement(21317..22147)
                     /gene="ftsQ"
                     /locus_tag="MOX77_002072"
     CDS             complement(21317..22147)
                     /gene="ftsQ"
                     /locus_tag="MOX77_002072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsQ"
                     /protein_id="HCA3357609.1"
                     /translation="MSQAALNTRNSDEETPSSRRNNGTRLAGILFLLTVLCTVFVSGW
                     VVLGWMEDAQRLPLSKLVLTGERHYTRNDDIRQAILALGAPGTFMTQDVNIIQSQIER
                     LPWIKQASVRKQWPDELKIHLVEYVPIARWNDQHMVDAEGNTFSVPSDRIGKQVLPML
                     YGPEGSASEVLQGYREMGQVLAKDKFTLKEAAMTARRSWQLTLNNGIKLNLGRGDTMK
                     RLARFVELYPVLQQQAQTDGKRISYVDLRYDSGAAVGWAPLPPEESNQQQNQAQAEQQ
                     "
     gene            complement(22149..23069)
                     /locus_tag="MOX77_002073"
     CDS             complement(22149..23069)
                     /locus_tag="MOX77_002073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HCA3357610.1"
                     /translation="MADKIAVLLGGTSAERDVSLNSGAAVLAGLREGGIDAHPVDPQE
                     VDVAQLKAMGFQKVFIALHGRGGEDGTLQGMLELLGLPYTGSGVMASALSMDKLRSKL
                     LWQGAGLPVAPWVALTRAEFEKGLSEEQKARISALGLPLIVKPSREGSSVGMTKVVEE
                     NALQGALSLAFQHDDEILIEKWLCGPEFTVAIVGEEILPSIRIQPAGTFYDYEAKYLS
                     DETQYFCPAGLEASQEAALQSLVLQAWKALGCTGWGRIDVMLDSDGQFYLLEANTSPG
                     MTSHSLVPMAARQAGMSFSQLVVRILELAD"
     gene            complement(23062..24537)
                     /gene="murC"
                     /locus_tag="MOX77_002074"
     CDS             complement(23062..24537)
                     /gene="murC"
                     /locus_tag="MOX77_002074"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HCA3357611.1"
                     /translation="MNTQQLAKLRSIVPEMRRVRHIHFVGIGGAGMGGIAEVLANEGY
                     QISGSDLAPNPVTQQLTSLGATIFFNHRPENVRDASVVVVSSAISADNPEIVAAHEAR
                     IPVIRRAEMLAELMRFRHGIAIAGTHGKTTTTAMVSSIYAEAGLDPTFVNGGLVKAAG
                     VHARLGHSRYLIAEADESDASFLHLQPMVAIVTNIEADHMDTYHGDFENLKQTFINFL
                     HNLPFYGRAVMCVDDPVIRELLPRVGRQTTTYGFSEDADVRVEDYQQIGPQGHFTLLR
                     QGMPDLHVTLNAPGRHNALNAAAAVAVATEEGIDDDAILRALESFQGTGRRFDFLGEF
                     PLEPVNGKAGTAMLVDDYGHHPTEVDATIKAARAGWPDKNLVMLFQPHRYTRTRDLYD
                     DFANVLTQVDALLMLDVYPAGEAPIPGADSRSLCRTIRNRGKIDPILVSDPAQVATML
                     APVLTGNDLILVQGAGNVGKIARYLSEIKLKPQIQEEEQHG"
     gene            complement(24656..>25074)
                     /gene="murG"
                     /locus_tag="MOX77_002075"
     CDS             complement(24656..>25074)
                     /gene="murG"
                     /locus_tag="MOX77_002075"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459133.1"
                     /note="N-acetylglucosaminyl transferase;
                     UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
                     pyrophosphoryl-undecaprenol N-acetylglucosamine
                     transferase; involved in cell wall formation; inner
                     membrane-associated; last step of peptidoglycan synthesis;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine--N-acetylmuramyl-
                     (pentapeptide) pyrophosphoryl-undecaprenol
                     N-acetylglucosamine transferase"
                     /protein_id="HCA3357612.1"
                     /translation="SGKGAQLTVEQAYAGAGQPQHKVTEFIDGMAAAYAWADVVVCRS
                     GALTVSEIAAAGLPAIFVPFQHKDRQQYWNALPLENAGAAKIFEQPQFTVEAVADTLA
                     GWSREALLTMAERARAVSIPDATERVASEVSRVART"
BASE COUNT         5776 a         7139 c         6362 g         5797 t
ORIGIN      
        1 agcccgtttg tccttatctt ccatgagctg ggcgatacgt ttgtcgccaa tgcgctgaat
       61 atcgtggttc tcaccgccgc gctatcggtt tataacagct gcgtttactg caacagccgt
      121 atgctgttcg gtctggccca gcagggaaat gcgccgaaag cgctgctgaa cgtcgacaaa
      181 cgcggcgtgc cggtgagctc cattttggtt tccgccgtcg tgacggcgtt gtgcgtgctg
      241 ctcaactacc tggccccaga gtccgcattc ggactgctga tggcgctggt ggtctccgcg
      301 ctggtcatta actgggcgat gattagcctt gcccatatga tgttccgtcg cgcgaaacag
      361 cagcagggcg tgaaaacccg cttcccggcc ctgttttatc cgttcggcaa cgttctctgc
      421 ctgctgttta tggcggcggt attgatcatt atgctgatga cgccaggtat ggcgatctcc
      481 gtgtggctga ttccggtatg gctgctcatc ctgggcgtcg gctacctgtg taaagaaaaa
      541 acggcaaaaa cggtgaaagc ccactgatcg tggcgttact tttccgccct ccccgtccgg
      601 ggagggtgtt atctgcctca cagtttccca cgtataacca ttttatccat atcagcggcg
      661 tgatcctgct acgcaaaaaa aagctcgcag gcgaataatt accgccatca tctgatgggg
      721 agaagtctca atggataagg gcagactttc ggtaagagag aaaatcgggt atggcatggg
      781 tgacgccgga tataacatta tttttggcgc tatcatgctg tttgttaatt acttttatac
      841 ggatattttt ggtcttgccc cagcgttagt cggtgtttta ctcctttcag tacgcgttat
      901 cgatgccgtt accgatccgg tgatgggcgc gcttgccgat cgtacccaaa gtaaatatgg
      961 tcgtttccgc ccctggctac tgtggattgc atttccctac gcgctgttca gcgttctgat
     1021 gttcacgacg ccggactggg gctataacag caaagttatc tatgccttcg tcacctattt
     1081 tctgctttcc gtgacctata ccgccatcaa tattccctat tgctcactgg gcggcgtgat
     1141 cactaacgat ccaaaagagc gcgtagcctg tcaggcttat cgcttcgtgt tagtcggcat
     1201 cgcgacgctg ttgctatcgt taacgctatt gccgatggtg gactggtttg gcgacggcga
     1261 caaagccaaa ggctatcagt tggcgatgac cgtgctggcg attatcggca tgggtatgtt
     1321 tctgttctgc tttgccagcg tccgcgaacg cgttcgccct gccgttccga cgcacgatga
     1381 tatgaagaat gatttcaaag atgtgtggaa aaacgatcaa tgggtacgca ttctgctatt
     1441 gaccttatgt aacgtctgcc cggggtttat ccgtatggcg gcgaccatgt attacgtcac
     1501 ctgggtgatg ggacaaagca cccatttcgc tacgcttttt attagtcttg gcgtggtcgg
     1561 tatgatgatc ggcagtatgc tggcaaaagt cttaaccgat cgctggtgta aattgaaggt
     1621 atttttctgg accaatatcg cgctggcgat tttctcctgc gcgttctatt tctttgaccc
     1681 gaaagccacc gtgatgatag tggcgctcta cttcttgctc aatattctgc atcagatccc
     1741 ttccccgtta cactggtcgc tgatggcgga cgtcgatgat tacggcgaat ggaaaaccgg
     1801 caaacgcatt accggtatta gcttctccgg taatctgttc ttcctgaaac tgggcctggc
     1861 gattgccggg gcgatggtcg gctttttgct ctcctggtac ggttatgacg ccagcgccaa
     1921 agcgcaaagc gcctcggcga tgaacggtat tatgctgttg tttaccgtta tccttggcgt
     1981 tggctatctg attaccgcag gcgtggtacg tctgctgaaa gttgaccgtg aactgatgaa
     2041 aaaaatccag gacgatttgg aaaaacgtcg cactaattac cgcgaattga gtgagttgca
     2101 ggagctcaaa gccgctgaaa gcgtaaggaa agcctgatgg caaactggcc aaacccgttt
     2161 attgaacaac gtgccgatcc gtttatttta cgcgacggca gcgattacta ctttattgcc
     2221 tccgtaccgg aatatgacag gctggaaatc cgccgggctg attcgctgga agggttgcgc
     2281 gccgccgacc ccgttgtcgt ctggcgcaaa ccggaaagcg gcccgatgag ccagctcatc
     2341 tgggcaccgg aaatgcaccg catcaacggt aagtggtaca tctattttgc cgctacccat
     2401 actcaagcgc ttgataaact gggaatgttc cagcaccgca tgtttgccct ggagtgcgcc
     2461 gatgccgacc cactcaccgg caagtggacg gagaagggtc aaattaaaac gccgtttgat
     2521 accttctccc tcgatgccac cactttttat catcagggaa aacagtggta tctgtgggcg
     2581 caaaaagcgc cggatattgc cggtaactca aatatttatc tggctgaact ggaaaatccg
     2641 tggaccctta aaggcgagcc ggtaagactc agtaagccag agtacgactg ggaatgtcgg
     2701 ggtttttggg ttaacgaagg tccggccgtc gtggtgcatg gcgacaagct gtttatcagc
     2761 tattcggcca gcgccaccga tgaaaactac tgtatggggt tactgtggat taacgtaaac
     2821 gacgatccgc gcgatccggc caactggcat aaatcaccgc gcccggtctt taccaccagc
     2881 tatgaaaatc gccagtatgg gccgggacac aacagcttta cgcaaacgtc ggaaggtgaa
     2941 gatgtactgg tgtaccacgc gagaaattac accgaaattg aaggcgatcc gttgtacgat
     3001 cccaaccgcc atacgcgtct gaaacgggtg cgctgggacg aaaacgggat gcctgatttt
     3061 ggcgtgccgc cagccgatac gatctaagcc gttgcactgc ccggtggcgc tagcgcttac
     3121 cgggcctaca gatttttcca ttgtaggcag cataagcgtt agcgctatcg gcacaacatt
     3181 acactaatgc cccataaatg gtgagcaacg caataatcac caccaccaca aacgaggcct
     3241 tcttcgccat cgataccgcc gctttggggg tttctacttt gtcagtatgc ggttcgcgca
     3301 ccagtgagaa ctgcgccaga cgtgtgagca cctgatattg cgaagtatgc agatccgcca
     3361 gcgaggcaaa ccaggccggc aacgctttct cgccatgccc cagtaatgca tacactacgc
     3421 ccgccagacg taccggaatc cagtccagta catgaagaat agcgtcaatg ccggattgca
     3481 aacgttggtg cggcgtctga tagcgcgcca gccaggtctg ccaggcccgt aaaaacgcat
     3541 agcccaccag cgttaccggc ccccacggac cgccaacgat aaaccaaaat agcggtgcga
     3601 ggtaaaaacg gaaatttatc cataacaacg cgttttgcag ctcacgcaaa aactcacgct
     3661 cattacaatc cggcggcacg ccgtgaatca gcgtaagctc gctggccatc gcctcgcaag
     3721 gatgcggatc gttacgggac gccgctttca gccaggcgtg ataatgtact cgcactttgc
     3781 ccgcgccgat acacagcacg cccaggagaa tccacaccac cagcgtcggc acgttaaata
     3841 gcagcccttt taacgcctgg agcagtagaa aagtcaccac catcgcgatc gccgtcattc
     3901 ccatcgtgcg caacatcgaa aaatgcgtaa tccgacggaa tagcgcctcc agccgatgat
     3961 cgagctgcca gtgctcgccc agcttaaaca ggcgctcgac aatcagcacc agtaatgtcg
     4021 taaacagcgt catgtcatct ccttgtgcga cgagagggct accaaagcgc gaaagcgcgg
     4081 ccagtcaaag gcagggccag ggtccgtttt gcggtcaggc gcaatgttgc agtgtccggt
     4141 catattgtcg gcgatcgccg gatagcaagc gataagcgtg cgcgtcacgg cggctagctg
     4201 ctgatactgc gcatcggtat aagccagcgt atccgtcccc tccagctcaa taccaatgga
     4261 gaaatcatta caacgttccc gcccctgata gtttgatacg cccgcatgcc acgcacgctt
     4321 atcaaaaggc acatactgga cgatttcacc gtcgcgacga atcagacaat gggccgaaac
     4381 acgaagatga gcgatttctg caaaaaaagg atgggcgtct ggatctatcg ttccggtgaa
     4441 taatgcatcg atccacggac cgccaaactc gccggggggc aggctaatat tatgcaccac
     4501 cagcaaggac ggtttttcgt catccggacg gcaatcataa tgcggagaag ggacgcgtcg
     4561 cgcctctacc aaccaaccct tatctggcaa catgcggagt ctccttttga gtggtgctta
     4621 tagctgcttc agagtagcat gtttctacct tatgattcgt tagcaatttg gagttttatc
     4681 atgccgcctc gccgttataa cccagacgac cgacgtgacg cgctactgga acgcattaat
     4741 ctcgatatcc ctgccgccgt tgctcaggcg ctgcgtgaag atttaggtgg agaagtcgat
     4801 gctggcaacg atatcaccgc gcaacttttg ccggcagata cgcaagccca tgccacagtg
     4861 atcactcgtg aagacggcgt tttctgcggc aagcgctggg ttgaagaggt cttcatccaa
     4921 ctggcgggcg atgatgtgcg cctcacctgg catgtcgatg acggcgacgc cattcacgcc
     4981 aaccaaacag tgtttgaact gaacggcccc gctcgcgtat tgctgaccgg cgagcgcacg
     5041 gcgctaaact ttgtccagac cctttccggc gtcgccagtg aagtacgccg ctacgttgga
     5101 ctattggctg gcacccaaac ccagttgctc gacacgcgta aaacgctgcc gggtctgcgc
     5161 accgcgctca aatatgcggt tttatgcggc ggcggcgcca atcatcgtct gggtctcact
     5221 gacgcgttcc tgattaaaga aaaccatatc atcgcctccg gttcggttcg tcaggcggtg
     5281 gaaaaagcgt tctggctaca tccggacgtg ccggtagaag tcgaggtcga aaatctggat
     5341 gaactggacg atgcgctgaa agcaggcgcg gatatcatca tgctggataa tttcaacacc
     5401 gaccagatgc gcgaggcggt gaaacacgtc aacggccagg cgcggctgga agtatccggc
     5461 aacgtcaccg cggaaacctt acgcgaattt gctgaaaccg gggtggattt catctccgtt
     5521 ggcgcgctga ccaagcacgt gcgcgcgctc gatctctcca tgcgtttttg ctgatcctct
     5581 ccgcccgatg gcgctgcgcc gtcgggtcta taaatcacct gtccgtagat ccgcgtcgtg
     5641 attcggtaaa atattcgtag cgcctcgcaa taacgttgcc gtgtcatgta acgcagcgaa
     5701 aatcttcaga atccgccttc ccgttttacc ttttgccgct cgcccgctct tcccttgttt
     5761 gccacagtag cgccggctaa ctcaaggagc gaacaatgga aaaacaacgc ggtttcacgc
     5821 ttatcgaact gatggtcgtt attggcatca tcgccatttt aagcgccatt ggcattccgg
     5881 cttaccagaa ctatctgcgt aaagcggcgc tgacggatat gttgcaaaca tttgtcccct
     5941 accgtactgc cgtcgaactc tgcgctctgg aacatggtgg gacgagcaca tgcgatgcgg
     6001 gcgtcaacgg tatcccctcg cccgtcatca cccgttatgt ttcgggcatg agcgtggaaa
     6061 aaggcgtcat cacgcttacc ggtcaggaga gtctgagcgg gcttagcgtc atcatgacgc
     6121 ccgcctggga caatgctaac ggcattaccg gctggacgcg taactgcaat attcaaagcg
     6181 acagcgcgtt acaacaggct tgtgaagatg tcttccgttt tgacgccaac taaggagaca
     6241 agatgaaaga cgctcagctc aacaccttgt gtcaacgtca tcaggctgta ctgatcaata
     6301 gcgccagcaa cagtatcact gttgcggtgg tcgacgcgcc ctctcatgcg ttattggacg
     6361 ctctgcattt cgccacgcaa aaacagattg atattgtgtg ctggactcgc cagcaaatgg
     6421 aaaatcatcg gcataagccg gatcaggcac cctcgacaaa cgccgcgaaa ggcggagaaa
     6481 ccgcggccca gcttctcaat cagacattac gctcggcgat ggcgaaacgc gcctctgata
     6541 tccatctcga acccggcgcc agccgctacc ggataaggct ccgcatcgat ggcgttcttc
     6601 atattctgca ggacatcgcc aaagagacgg ggcttgcgct gacggccaga ttgaaagtcc
     6661 taggaaattt ggacatcgct gaacatcggc tgccgcagga cgggcaattt accgttgacc
     6721 tgacgggcga cagcatctct tttcgtatcg ccacgcttcc ctgtaaagaa ggcgaaaaag
     6781 tcgtcttacg gttgttgcat caggttgaac aaacgctgga tctggacacg ctgggcatgt
     6841 acggggcaca acttaccgct tttagacaag ccctacagca acctcagggg ctggtactgg
     6901 tgactggccc caccggtagc ggaaaaacgg tcacgctata cagcgcgcta caaacccgga
     6961 atacgccggg tatcaacctc tgtagcgttg aggatccgat agaaattcca ctggatggga
     7021 ttaaccagac gcagatccat ccccgcgccg ggctcacctt tcaaaatgtg ctgcgcgcgc
     7081 ttttacgcca ggaccctgac atcatcatgg taggtgaaat tcgtgacggc gacaccgcag
     7141 aaatcgccat taaggcggca caaacgggcc atctggtact ttcaacactc catacgaact
     7201 ccaccagcga aaccctgata cgtttgcagc aaataggcgt aacacgctgg atgatctcat
     7261 cggcgcttac gctggtggta gcgcaacgcc tggtaaggaa gctttgcccg cactgcaaac
     7321 agcgtctgag cgatcccgtg gtgctatcgc ccaatctttg gcccagcgcg ctaccgcgct
     7381 ggcaggcaaa cggctgtcag cattgctacc acggctttta tggccgaacc gcgttattcg
     7441 aagtgttaac cgttaccccg gcattacgtc agttaattgc gagcggcgca tcggcgcaag
     7501 cactggaagc ccacctccag cagaccggta cagggacgct ttttgaaaat ggctgtcgcg
     7561 ccgttgagca aggcatgacg tcctttgaag agatactgcg cgttctggga atgccccatg
     7621 agcgttaaac agctctggcg ctggcaaggc gttaacgata aaggtcaact ggaacaagac
     7681 gttgtatggg tggacaatcg tctggcgctg atcatcaccc tgcaacatca gcgcattatg
     7741 ccgcttcgca tcaagcgcat aagcgttaac gccgcactgt ggaaagaaga gcaaagcgct
     7801 gaaattattc atcagttggc cacgctcatt catgccggac tgacgctttc tgaagggctg
     7861 gaactccttg cgaaacagca tccccaccga caatggcaag cgctgttgcg cacgctggct
     7921 cacgagcttg aacagggcgt ccctttttcc agcgcattag tctcctggcc gcaggtattt
     7981 ccgccgctct accagacgat gatccgcacc ggagaactga ccggcaaact ggccgaatgc
     8041 tgctttgaac tggcccgtca gcaaaaagcg caacggcaga ttacggttag cgtgaaaaag
     8101 gcgctgcgct atcccgccat tattctaaca atggccgccc tggtcgtttt cgccatgctg
     8161 cactttgtcc tgccggaatt tgccgccatt taccgtagct tcaatacccc gcttcctctt
     8221 ctgacacgcg gtattatcgc gatagcgcaa tgggggccgg catggggttg gctcatcttg
     8281 ttcctgacga tgctcgttgc tatcgctcac cgcaggttaa aacaaaaacc gtcctggcaa
     8341 gcgcagcggc agcgtcttct gctacggctt cccgttatgg gtcgcctgat aagaggccag
     8401 aaactagcgc aaatattcac cgtactggca ttaacccaaa gcgcaggcat tccttttctt
     8461 cagggactgg aaagcgctat cgatagtctc ggctgccctt actggtcaca gcgtttaacg
     8521 caggtacatc aggagatcgc cgcgggcaat ccggtctggt tggcgctaaa aaatacccag
     8581 gaatttagtc cgctatgcct gcaactggtc agaacgggcg aagcgtccgg ttcactcgat
     8641 atcatgctgc ataaccttgc ccgtcaccac agtgaatcta cgctggcgct ggccgataat
     8701 ctggcgtcgc tgttggaacc ggcgttattg atcatcaccg gcttaattat cggtacgctg
     8761 gtggtggcga tgtatttgcc gatttttcat ttgggagacg cgatgagcgg gatgggataa
     8821 ggctggcgca catttacgcc agccagaata ttagaggcta ttgaaaatgc ggttttcttg
     8881 ttcctgcacc cgaataaagg tggtgcgttt ggtcaactct ttcaggcgag acgcgccgac
     8941 ataagtgcag gctgagcgta gaccgcccag gatatcgcgg gcggtattgc ccaccggccc
     9001 acgcagtggc aatttaaccg ttttaccttc tgccgcgcgg tatttcgcaa cgccgccgac
     9061 atgacggttc atcgcagatt ccgaactcat gccgtagaac agcatgaatt tctcgccatt
     9121 ctcttctacc acgctgccgc cgctctcttc gtgacccgcc agcataccgc ccaacataac
     9181 gaaatccgcg ccgccgccga aggcttttgc tacgtcgcct ggcatggtgc agccgccatc
     9241 gctgacgatc atgccgccca ggccatgcgc cgcgtcagca cattcgataa ccgccgacag
     9301 ttgcggataa ccgacgccgg tttttacacg cgtcgtgcat acggagccgg gaccaattcc
     9361 cactttcacg atatcggcgc cggagaggat aagctcttcg cacatctcgc ccgttaccac
     9421 attgcctgcg cagattgttt ttgacggcca tgcttcacgc gcttttgcga cgaactgcac
     9481 aaaatgttct gaatagccat tggccacatc aatacagaca aagttcagcg caggattcag
     9541 cgccagaatc tgcacggttt tttcgaaatc agcatcagag gtcccggtgg aaaccatcac
     9601 atgcttgaga acatcagccg aagccgtgtt gataaaagct gcccactctt caacgctata
     9661 atgtttatgt acagcggtca gaatatcaaa cccggccaac gcttgcgcca tttcaaacgt
     9721 cccgacggta tccatattgg ccgcgataat cggtacgcca gaccaggtct gacctgagtg
     9781 tttaaaggtg aattgacgtt ccagttcgac atcggaacgg cttttgaggg tagaacgctt
     9841 aggacggata agaacgtctt tgaaacctaa cttcagatct tcttcaatac gcatgtgcgg
     9901 attcctgagg ttaatggcga aaaatcgaaa ctcacaactc cagtgacgct atcatacgca
     9961 ctaatcatgg ccgtacaaga ctcagaaatt ctcttttttt acgttacaat cccataaatt
    10021 tacctggcga atagtaggtt aatgctcaga gcatatcgtc tttgtatgtt taaaatttaa
    10081 ccttttgatt atcaaactaa aattccggaa gctggagata tgaggtatac cgtagcctta
    10141 accggcggta ttggcagcgg taaaagtacc gtcgctgatg ccttcgctga cctcggaata
    10201 accgtcatcg acgcggatat tatcgcgcgc cagatggttg agccagggca gcccgccctg
    10261 aacgcaatag cggaacattt tggttctgaa cttatcgccg ccgacggcac gttacgtcgc
    10321 cgggcactgc gtgagcgtat tttttcgcat ccggaagaaa aagcctggct taacgctctg
    10381 cttcatccct taattcagca ggaaacccaa cgacagtttc aacaggctac gtcgccctat
    10441 gtgttatggg ttgtgcctct gctggttgaa aacaggttgt atcaaaaagc caaccgcgta
    10501 ctggtggttg acgttacgcc cgaaacgcag ctcatacgca caatgcagcg tgatgatgtt
    10561 acgcgcgagc atgttgaaca cattctcgct gcgcaggcga cgcgtgaagc gcgccttgcc
    10621 gtggcggacg atgttattga taataacggc gcaccggatg ctatcgcatc agatgtggcc
    10681 cgcctgcacg ccagttatct taagctcgcg tcgcagtttg tctcacagga aaaaccgtaa
    10741 tgcacaccca ggtcctattt gaacaccctc tcaatgagaa gatgcgtacg tggctgcgca
    10801 tagagttttt gatccaacag ctctccatca acctgccaat tgcagaccat gctggcgcac
    10861 tgcatttttt ccgtaatatc agcgatctac tggatgtgtt cgaacggggc gaagtccgta
    10921 ccgaactgct gaaagaactg gagcgccagc agcgtaaatt acaggcctgg gttgaggttc
    10981 ccggcgtcga tcaagaccgt attgaagccc tgcgccagca gttaaaatcg gcgggcagcg
    11041 tgctgatctc cgccccgagg attggccagc agctacgcga agatcgcttg attgctcttg
    11101 tgcgtcaacg cttaagtatt cctggcggct gttgcagttt cgatttaccc actctgcata
    11161 tctggttgca cctacaacag gcgcagcgcg atgcccagat tgaaagctgg cttgccagcc
    11221 tgaatcccct cacccaggcg ctgacgctgg tgcttgatct gatccgtaat tcagcgcctt
    11281 tccgtaagca aaccagcctg aacggttttt atcaggataa cggggacgac gccgatttgc
    11341 tgcgtcttat gctgacgctc gattcacaac tttatccgca aatttccggc cataagagcc
    11401 gttttgccat tcgctttatg ccgctggata gtgaaaatgg tctggtgccg gagcgtcttg
    11461 attttgaact ggcctgttgc taaggagtaa aaatgtctga cgtgaccgtc gtaaactgtc
    11521 cgacctgcgg taaaccggtc gtctgggggg aaattagccc cttccgccca ttttgttcta
    11581 aacgctgtca gttaattgat ttgggcgaat gggccgccga agagaaacga atcgccagca
    11641 gcggcgacca gtctgatagc gacgactgga gcgaagagcg ctaacggtga tagctctgtt
    11701 gagacggcaa tatcgcctta tgacaaaaat aatcaataaa tacgcgtagt tttggcgcca
    11761 tatgcgcgcg gccgggataa tacaaataaa accggtccgc cgcaggcagc cactcctcaa
    11821 gtacggaaca caaccgccca tcctgtaagt cttcgtggac atcctgttca aaaacgtagg
    11881 ttagctctgc cccatcacgc gcggcggaga gacgcaacgc tttatcattc accattaacg
    11941 cggcttccgg cgtaatttcc agccgttgcg ctccatgaac aaactcccac cgatatagcc
    12001 cgctctcacg cgtaaaacga tggcaaaggc agcggtgatt gatgagctcc tgaggatgca
    12061 gcggcgtgcc aaaacgcgca aggtatgcag gggatgctac gatcgccggg cgtaaaacat
    12121 caccgagcgg aacgacattc atatcaagtt gtaccgcatc gccaaagcga ataccggcat
    12181 caaagcgttc gttaattaaa tccacaaaac cgtcattcac atcgatatcc agccgaatat
    12241 cgggataatc gcgcatgaag ccggcgagat taggttgtaa cagaagcgtg gccgccgtgc
    12301 gcggtacggt caggcgtaat gtccctccgg gtatatcgcg gctctggcag gcatgttcca
    12361 tcgcctcatc aatatggttc aatgcgggtc tgatactggc aagaaaggca tgtcctgctt
    12421 ctgtcaaacc gacacgccgg gtggttcggt tcaataattt cacgccaagt tcatcctcca
    12481 gttgacgcat attctgactt aacgccgacg tggaaatatg taactgcgcc gctgcccgcg
    12541 tgaagctatg gttttcagca atcatgcaaa aagcatgcaa tacggacatc acatcatgac
    12601 gcattattaa gccagccttc ataaaccatg cttattcccc ctatttttca tcttatacgc
    12661 caggtataga ctgcctgcca tgcacaaaat atcctcatgg aggcagtatg caatatcgta
    12721 cattaggcgc aaacggaccg cgagtgtcag ccatcggact gggatgtatg ggcatgagcg
    12781 cattttacgg cgctcatgac gacagcacct caattaagac gctacattat gcgttagatc
    12841 agggggtaac actgctcgat accgcagata tgtatggccc ttataccaat gaaaggttag
    12901 tcggaagagc catcgccgat cgtcgcgatc gggtattttt agcgacgaaa tttggtatcg
    12961 ttctcgaccc tgctaaccct atggcgcgtg gcgtcaatgg cagaccggag tacgttcgcc
    13021 gtagttgtga gcaaagcctg caacgcctgg gggtcgatca tatcgatctg tactatcaac
    13081 atcgcgttga tccatcagtt cccatagaag agactgtcgg tgcaatggcg gacctagtgc
    13141 gcgagggaaa agtgcgttat ctcgggctat ccgaagcatc aacgcaaacg ctggaacgcg
    13201 cccataacgt tcaccctatt accgcgctgc aaagtgagta ttcgctttgg tcccgcgaag
    13261 cggaaatttc agcactttcc acctgtgaac ggttgggtat aggattcgtc gcttacagcc
    13321 cgctgggacg cggatttctg accggtacga ttaaaacgcc agaagatttt gctgcgaatg
    13381 acttccgtcg cacaaatccc agattcatgg gtgagaactt ctcgcgcaat ttacgtctgg
    13441 ctgaagcaat aaaacaaatg gcacgcgaaa aagagtgtac ccccgcacaa ttagcgctgg
    13501 cctggctgct ggcccgcaac aggcacctcg ttcccattcc cggcacccgc cactgcgcca
    13561 gggtggatga aaacctcggc gcgttatcac tgaccctaag cccgcaggag ctggcggcaa
    13621 ttgaggcggt ttttcctcac gacgccgcag ccggcccccg ctactggccg gaaattatgt
    13681 cgacattaaa tcgctaataa gatcgatggg gatcgtgttg cgatccccca ctaaggcgca
    13741 aattggcgta atttacgaat aatcggttca ttggccggcg gaaaatcgtc cgtattcaac
    13801 gcgttttgcg cgatccaccg tcccggctgt ccttctttcc cccacggttc gccctcccag
    13861 cgttcaacca gccaaaacca cagcgtaatg tgtctatccg ggaattgata ttccagagtg
    13921 tcgaataatg tcacctgtgt tggcgtaatc cccacctctt cctgtagctc ccggatcaac
    13981 gcctgctctg gtgtttcgcc ggcttcaatt tttccgccgg gaaattccag cttgttcgcc
    14041 atatgcgcat cagcggcgcg tcgggtaata aaaatttcgt cgttcgggtt gcggataatc
    14101 ccaaccgcga tttgcagttt tttcatcttg gtgcatccat aaaaaaggcg cagtcgcctg
    14161 cgccttttta tctgtgttca atgctaggcc gaataagcgt agcgcccttc ggcaataatg
    14221 ccagcaccga ccgacctgat ggcaacacat tatgtcttat caggccggta agtttatcgc
    14281 atcagctcag gcgaccgtga cactgtttgt atttcttacc ggaaccacaa gggcaaggat
    14341 cgttacgtcc aatcttacgt tcgccggttt gggcggccag atcggcagcc acggcggcat
    14401 cgtcatcctg atggcttagc tgctgcatct gcgccaagcg ctccgcctct tcgcgacgct
    14461 gcatttccat cgcttcgacc tcttccggca tacgtacctg gactttgctc agggtactga
    14521 tcacttcata tttcagcgat tccagcatcg cggcgaacat agcgaaggat tcgcgcttgt
    14581 attcctgctt cggatctttt tgcgcatagc cgcgcagatg aataccctga cgcaggtaat
    14641 ccatcgccgc caaatgctct ttccacaggg aatcgagcgt ttgcagcatc acgccttttt
    14701 cgaaatgacg catcatttca gcgccaacca cctcttcttt acgctgatac acctcgatgg
    14761 actgcgccag gatgcgctca cgcagcgtct cctcatgcag ctccggctct ttatccagcc
    14821 attcggcaat cggcatctcc aggtcgaagt cgtttttcag gcgttcctgc aaacccggga
    14881 tatcccacat ctcttccagc gactgcggcg gaatgtaggc gtcgatagtc gccttaaaga
    14941 catcttcgcg aatgctgtta atggtgtcgc tcacgtcaga cacatccagc agttcgttac
    15001 gctgggtata aattgcacgg cgctgatcgt tcgccacatc atcatattcc agcagttgct
    15061 tacgaatatc gaagttacgg ctttctactt tacgctgcgc gttagcgata gctttcgtca
    15121 cccacgggtg ctcaatcgct tcgcccggct tcattcccag tttacgcatc ataccggaga
    15181 cacgatcgga ggcgaaaata cgcatcagcg catcttccat cgacaggtag aaacgggaag
    15241 aacccggatc gccctggcga ccggaacggc cacgcagctg gttgtcgata cggcgggatt
    15301 catggcgctc ggtgccaatg atatgcaggc cgccggcagc cagaaccgcg tcatggcgta
    15361 cctgccagtc cgctttaatc tgcgcaatct gttcttccgt cggcgcttcc agcgcagcga
    15421 cttccgcctg ccagctaccg cccagcataa tatcggtacc acgacccgcc atgttggtag
    15481 cgatagtgac cgccgctgga taaccagcct gcgcaacgat gcctgcttcg ttggcgtgga
    15541 attttgcgtt cagtacgtta tgtttgatgc ccgctttggt cagctctctg gagaccactt
    15601 cagatttctc gatagaaatc gtcccgacca gcactggctg accgttcgcg gtacgttctt
    15661 taatatcttc gataatggcc tggatttttt ccgcttcggt tatgtagacc agatccggca
    15721 aatctttacg gatcatcgga cggttggtcg gaacaacgac ggtgtccagc ttatagatag
    15781 aactaaattc gaaggcttca gtatccgccg taccggtcat accggccagc ttttcataca
    15841 gacggaagta gttctggaag gtaatagacg ccagcgtctg gttttcattc tgaatttcaa
    15901 cgccttcttt cgcttctacc gcctggtgca gaccgtcaga ccagcgacgc ccctgcatgg
    15961 tacgaccggt atgttcatca acaatgatga cttcgccgtc tttcacaatg taatccacgt
    16021 cacgggtaaa cagcgcgtgc gcgcgcagcg cggcggtgac gtgatgcatc aacataatat
    16081 tgccaggcga gtagagcgac tcgccttcat ccataatgcc ttcttgcacc agtagctctt
    16141 cgatcagcac cagaccgcgt tcggtcaggt taacctggcg cgctttctca tcaacggaga
    16201 agtggccttc gccctggaaa gtgtcagaat cttctttctc ctgacgaatc aggtgcggaa
    16261 tgattttgtt cacttttttg tacatttccg agctatcttc cgccgggccg gaaataatca
    16321 gcggcgtacg cgcttcatcg atcaggatgg agtcaacctc atccaccagc gcataatgca
    16381 gtttacgctg cacgcgctct tccgggctga acgccatgtt gtcgcgcagg tagtcaaaac
    16441 cgtattcgtt gttagtgccg taagtgatgt cggcagcgta agcttcacgt ttggctggcg
    16501 caggcatacc tggcaggttg ataccaacgg acataccgag gaattcgaat agcggacggt
    16561 tgttttcggc gtcacgctgc gccagatagt cgttcacggt caccacatga acgcctttgc
    16621 cggacagcgc gttcaggtag gctggcaggg ttgcggtcag cgtcttacct tcaccagtac
    16681 gcatttcggc aatacaacga tcgttgagca ccatgccacc caatagctga acgtcgaagt
    16741 gacgcatccc aaagacgcgt ttactggctt cacgcaccac cgcgaacgct tccggaatca
    16801 ggctctctac gctttcgcct tttccaatac gggcgcgaaa ttcgttggtt ttcgctttca
    16861 gttcgtcatc ggagagtttt tccatctccg gttccatcgc attaataagg ctgacggcct
    16921 tacgcatacg acgcagcgta cgatcgttac ggctaccgaa tactttggtt aataatttga
    16981 ttagcataat aaagtctcaa atgccccgcg ccgcggagct acaaataaag taaaagggtc
    17041 ttttttcgtt agctgagacg ttgcggaccg gcgcggatac cctgcgcctg acttatccag
    17101 gccgggatgc taaatgcggt ttgtggcgca aaatacgcca gggagaggcg gcgaacaatc
    17161 gccggcggcg tgccctcctg cgtgagcatc gcgctgagcg tattcagtaa ggcgatatga
    17221 tgcgcctgta atggcgacgg cgcgtcggca acgggcagcg tttgcggcgc cattgcaaaa
    17281 gaaaggtggc gaatcaccgt gcgaatagcg tgctgatgcc agtaatctac ggtgaaattg
    17341 ggacgacggt tagaggcttc taacagcgca agatggctaa agttaacttt agacgcggtg
    17401 ctggcggtcg tccttgcagg cgtattggtt tcagcggcgt tactgagcgc gggcaaacca
    17461 aaactcgccg cgaccatccc taataagaga tgcggccaga agtatcgtct gcctaactgt
    17521 cgccagcgcg tcagtattcc actcacgtca ttgccacctg atatgcccct catgggctta
    17581 cggaatcaaa acaatttgcg cacaaatctt atcattaaag cgtacgcgct acagcagtaa
    17641 tgacgagaag ctaaggtgaa aatcggctaa gaaaacagcg aacgcgccgt gtttccattt
    17701 aaccctgtca aaatggctgt attaaggaaa gcgcagataa aggatagtaa aaaaaaaaac
    17761 gactagctcg cctggccgga gagagtgcca ggttaaccag tcgaatttta tacgacagcg
    17821 tatgtcgtta tgccagtacc gtcgaaggcg ctttgaaagc caacggcagt tctgcgtcgt
    17881 cctggaaggt cacaaattcc caggcttcct gttttgccag gactgcctgt aacaatttgt
    17941 tattcaatgc gtgaccggat ttatacgcgg taaacgcacc aataatattg tgaccacaca
    18001 tgaacaagtc accgatcgcg tcgagcattt tgtgacgaac gaattcatct tcaaaacgca
    18061 ggccgtcttc gttcaatacg cgataatcgt caacaacgat ggcacaatcg aagctgccgc
    18121 ccaggcacag gccgcgggac tgcagatatt cgatatcacg cataaaaccg aaggtacgcg
    18181 cacggctgat ctggcgcatg aaagcatccg cagagaagtt catcgcgtag cgctggctgc
    18241 tggaatcgat cgccggatgg ttaaagtcga tggtgaaatc caacgtaaaa ccattgtacg
    18301 gtctgaattc agcccattta tcgccatctt caacccgaac agtctctttg atgcgtacga
    18361 attttttggc gcagttcagt gcatcaatac cggcatcaag cagcaggtag acaaacggag
    18421 cggcactgcc atccatgatc gggatttccg gggcattaac ctcaataacg atgttatcga
    18481 tacctaagcc cgccagagca gcgttcaggt gctcaacggt tgaaatccgt acatcatgct
    18541 cattcaccag acacgtacag agcatggtat cacgcacaga tttggcatcg gccgggaaat
    18601 ctaccggtgg attcaagtcg gtgcgacgat agatgacccc ggtattggcc ggcgcagggc
    18661 gtaatgtcag ggtgactttt ttgccggtgt gtaaaccgac gccagtcgcc tgaacgatac
    18721 gtttaagtgt cctttgtttg atcatcgtat aatctcgcca aattacctat ccaaccgaag
    18781 tgtactatac attcggcggg ccagtttagc acaaagagcc cagaatccca aattccagct
    18841 aattcttaat cagcttgctt acgcaggaat gcggggatat ccagataatc cggctctttc
    18901 gccgcctgtg gcgcattgtc gttaaccact ttcgcgaccg ttttttgctc ctgcgtcagc
    18961 ggcgccatac cgtgctgctg ataacgatcc aacaccggct gctgcacctg tttattggtg
    19021 accagagtga tttcaggacg cttgtccata ccaattccag tggcaacaac ggtcacgcgc
    19081 agttcgtcgt tcatatccgg gtccagagag gtaccgataa ccacggtggc gttatccgac
    19141 gcaaaggcac ggatggtgtt accgacggtt tcgaactcat ccagacgcag gtcgaagccc
    19201 gccgtaatgt tgaccaacac gccgcgcgcg ccggacaggt cgatatcttc cagcagcgga
    19261 gaagaaatag ccatttcagc cgcttcttcc gcacggtctt caccgctcgc cacgccggag
    19321 cccatcattg cgtagcccat ttcagacatc acggtacgca cgtcagcaaa gtcgacgttc
    19381 atcaggcccg ggcgggtgat cagctctgcg ataccctgaa ccgcgccttt cagcacgtcg
    19441 ttagccgcgc cgaacgcgtc gagcagggag atgccacggc ccagcacttt cagcagcttg
    19501 tcgttcggga tggtgatcaa cgagtccaca tgcttggaca gctcggtgat accctgctcc
    19561 gcaaatgcca tgcgcttttt gccttcaaaa ttgaaaggct tagtcaccac ggcaacggtc
    19621 agaataccta aatcttttgc cacttcagca accactggcg ccgcgccggt tccggtaccg
    19681 ccgcccatgc ctgccgcgat aaataccatg tctgcgcctt caagcgccgc acgcagcgct
    19741 tcacggtctt cgtccgccgc attacggccg acttccgggt tagcgccggc gcccagacct
    19801 ttggtaatgc cgctaccaat ttgaatggtc tggccaaccg ccgtcttacg caacgcctgc
    19861 gcgtcggtat tcaccgcgaa gaattcaaca ccttcgatgc gctcgcgcac catgtgttca
    19921 acagcgttac cgccgccacc accgacgccg atgactgtaa tcaccgcgtc gttggttagt
    19981 tccataggtt caaacataat ctctctccgt catgtgcctg tcgcctgagg ccgtaatatc
    20041 tggcggcctc ataaaaatta aaactctttt cgcagccagc tattaagtcg cttgatccac
    20101 gagccaactg atgccgtaac acgtttttcc acttctgctt caccgtttaa gtgggactct
    20161 ttcccgtagt gaagcaatcc caccgccgtt gagtaatacg gctcctgggc ataatccgtc
    20221 agaccggtga tattcagcgg cgcgccgata cgcacctgcg tatgaaacac gcgctgagcg
    20281 caagcagcaa gcccttcgat ttgcgccgcg ccgccggtta acacaatgcc cgccgccagg
    20341 tgatgtttta ccccttgttg gcgaagctgt tcctgtaatt gcaatatctc ttcgttgacc
    20401 agattgagca gctcggtgta acgcggctca atcacttccg ccagcgtctg acgttgcagg
    20461 ctgcgcggcg gacgcccgcc tacgctcggt acttcaacgc tttcgtcttt accgacaatg
    20521 gaacccagcg cgcaaccgtg gcgaacttta atggcttcag catcgctcgg cggcgtacca
    20581 aaggcataag cgatatcgct ggtcaccacg ttccccgcgt aagggatcac tttggtatga
    20641 cgcagcgcgc cgccagtata aacggcgata tccattgtac caccgccgat atccacgaca
    20701 cagacgccca gttcacgttc atcttccgtt aacacggaat aactggccgc cagtccggca
    20761 aatatcagtt ggtcaacttt cagaccacaa cgttcaacag ctttgacaat gttttttgcc
    20821 atatcgttgt ggcaggtaat caaatgtact ttcgcctgca tacgcacgcc ggaaagaccg
    20881 accggatttt taatgccttc ctggtagtca atggcgtact cctgaggaat cacatgcagc
    20941 acgcgatgtt catcgcgcac gcgcactgac ttcgcagtat gcacgacgtt ttccacatct
    21001 tcctgcgtca cttcctcttc ggaaatgggc accataccaa tttcattctg acagctaata
    21061 tgtttgccgg aaagcgccag atataccgag gagatctggc aatcagccat caattccgcc
    21121 tggtcaatgg cgcgctgaac gcatttcacc actgactcaa ggtcattcac cccgccttta
    21181 tccatacccc gcgatgggca actgcccacg ccaatgatat tgaccatacc gtcgggcaga
    21241 acttccccta ctaaagcggc aaccttcgcg gtgccaatct ccagtcctac taccagtttt
    21301 ctgtccgtcg ccttgatcat tgttgttctg cctgtgcctg attctgttgc tgattagatt
    21361 cctcaggggg gagcggcgcc cagccaactg ccgcacctga gtcataacgc aaatcaacgt
    21421 agctaatccg tttgccatcg gtttgcgcct gctgctgtaa aaccggatag agttctacaa
    21481 agcgagccaa ccttttcatc gtatcgcccc tgccgagatt gagcttaatg ccgttattaa
    21541 gcgtcaattg ccaggagcga cgtgcggtca tcgccgcttc ctttagagtg aatttatcct
    21601 tagccagcac ctgccccatc tcgcggtatc cctgcaacac ttcactcgcg ctgccttccg
    21661 ggccgtacaa catgggtaaa acctgtttgc cgatgcggtc tgacggcacg ctgaaggtgt
    21721 tcccttcagc atcgaccata tgttgatcat tccaacgcgc aatcggcaca tattcaacca
    21781 gatgaatctt caattcatca ggccactgtt ttctgacgct ggcctgttta atccacggca
    21841 aacgctcaat ctggctctgg ataatgttca catcctgcgt catgaaggtt cccggcgcgc
    21901 ccagagccag tatcgcctga cggatatcat cgttacgcgt gtagtgacgc tcgccggtta
    21961 ataccagctt tgataacggt aaacgctgcg catcttccat ccaccctaac acgacccacc
    22021 cgctaacaaa cacggtgcac agtaccgtca gcaggaataa tattcctgca agacgcgttc
    22081 cattattgcg gcgtgaagaa ggcgtctctt catcactgtt tcgcgtgttc agcgcagcct
    22141 gcgacatatc agtccgccaa ctccagaatt cgtaccacta actgcgagaa gctcattccc
    22201 gcctgacgcg ccgccatcgg caccagacta tggctggtca tccccggaga agtattggct
    22261 tccagcagat aaaactgacc atcgctgtcc agcatgacgt caatacgccc ccatcccgtg
    22321 cagcctaaag ctttccatgc ctgcaggacg agagactgta gcgcggcttc ctgggacgct
    22381 tctaaaccgg cagggcagaa atactgagtc tcatcagaga gatacttcgc ctcataatca
    22441 tagaaggttc ctgccggttg gatacgaatt gacggtaaaa tttcttcgcc aactatcgcc
    22501 accgtaaatt ccggaccgca cagccatttc tcaatcagta tttcgtcatc atgctgaaaa
    22561 gccaatgata acgcaccctg taaagcattt tcttctacta ctttcgtcat accgacgctg
    22621 gagccttcac ggctgggttt gacgatcagc ggtaaaccca gcgccgaaat tcgcgctttt
    22681 tgttcttcgc taaggccttt ttcaaactca gcgcgcgtca gcgcgaccca cggcgcaacc
    22741 ggtaagcctg cgccctgcca cagcaattta ctgcgcagtt tatccatgga aagcgccgag
    22801 gccatcacgc cgctgccggt ataaggcagg ccgagcagtt caagcattcc ctgtaaggtg
    22861 ccatcttcac cgccgcggcc atgcaacgca ataaagacct tctgaaagcc cattgcttta
    22921 agctgcgcga catcgacctc ttgcggatcg acgggatgcg catcaatacc gccttcacgt
    22981 aacccggcca acactgccgc gccggaattt aacgaaacgt cccgctccgc agaggttccg
    23041 cccaacagga ccgcgatttt atcagccatg ttgctcttcc tcctggattt gcggcttcag
    23101 cttgatttca gataagtaac gcgcaatttt gccaacattt cctgcgcctt gcactaatat
    23161 caagtcgtta cccgtcagca ccggcgctaa cattgtcgca acctgagccg gatcggaaac
    23221 cagaatcggg tcaatttttc cccgattacg aatcgtgcga cataaagaac ggctatccgc
    23281 gcccggaatc ggcgcttcgc ccgccgggta aacgtccagc atcagcagcg catcgacctg
    23341 ggtcagcaca ttggcgaaat cgtcatacag atcgcgcgtg cgcgtgtaac gatgcggctg
    23401 aaacagcatc accaggtttt tatccggcca ccctgctcgc gcagctttaa tggtggcgtc
    23461 cacttcggtc ggatgatgtc catagtcatc caccagcatc gccgtcccgg ctttaccatt
    23521 caccggctca agcgggaact cgccgaggaa gtcaaaacga cgcccggtcc cctggaagct
    23581 ttccagcgcg cgcaggatag cgtcatcgtc gatgccttct tcggtcgcta ccgccactgc
    23641 cgcggcggca ttcagggcat tgtggcgacc cggcgcattc aacgtgacat gcagatccgg
    23701 cattccctgg cgcaacagcg taaagtgccc ctgcggccct atctgctgat aatcttctac
    23761 gcggacgtca gcatcctcgc taaagccata cgtcgtggtc tgacgcccca cccgcggcag
    23821 caactcgcgg atgaccggat cgtcgacgca cattaccgcg cgaccgtaga acggcaggtt
    23881 atgcaggaag ttaataaacg tctgctttaa attttcaaag tcgccatgat aggtatccat
    23941 atggtcggct tcgatgttgg tgacgatcgc aaccatcggc tgcaaatgca ggaaggatgc
    24001 gtcgctctca tctgcctcgg caatcaggta acgactatgg cccagacgcg catgaacgcc
    24061 tgcggctttc accaatccgc cattcacgaa agtcgggtcc agccccgctt cggcataaat
    24121 actggacacc atcgcggtcg ttgtggtttt tccgtgcgtc ccggcaatgg cgatgccgtg
    24181 gcgaaaacgc atcagttccg ccagcatttc cgcacggcga ataaccggaa tacgcgcttc
    24241 atgcgccgcg acaatttccg ggttatccgc ggaaattgcg ctggaaacga cgaccacgct
    24301 ggcatcacgc acattttccg gacgatggtt aaagaaaatc gtcgccccca ggctcgtcaa
    24361 ctgctgggtc accggattcg gcgctaaatc ggaaccactg atctgatacc cttcattggc
    24421 cagaacttcg gcaataccgc ccataccagc accaccgatg ccgacaaagt gaatgtgccg
    24481 aacgcgacgc atttcgggca cgatggaacg cagttttgcc agttgttgtg tattcattct
    24541 ttacgccatt aactccaata cccgccatac ttcaaattgc agatgcgttg gcttgcctgc
    24601 aacccaaatt attgagggta gaaaaaccct gcgatgcaaa aggcaccgcc acaaattatg
    24661 tccgggcaac ccggctgact tcactggcga cgcgctcggt agcatccgga atggataccg
    24721 cgcgggcacg ctccgccatg gttaacaacg cctcgcgcga ccaccccgcc agggtgtcgg
    24781 cgacagcctc tacagtaaac tgcggctgct caaaaatctt agctgcgccg gcgttttcta
    24841 acggcagcgc attccagtac tgctgcctgt ctttatgctg aaacggcacg aatatcgccg
    24901 gtaacccggc ggcggcgatc tcgctcaccg ttaaagcgcc ggaacgacat accaccacat
    24961 ccgcccacgc ataggcggcg gccatgccat cgataaattc cgttacctta tgctgcggtt
    25021 gtcccgcccc ggcatatgcc tgctctaccg tgagctgcgc gccttttccg cttt
//
LOCUS       DAGWFR010000051        24837 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.052, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000051 DAGWFR010000000
VERSION     DAGWFR010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 24837)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24837)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24837
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.052"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..1124)
                     /locus_tag="MOX77_002076"
     CDS             complement(<1..1124)
                     /locus_tag="MOX77_002076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tar ligand binding domain-containing protein"
                     /protein_id="HCA3357613.1"
                     /translation="MFNRIRVVTMLMMVLGVFALLQLVSGGLLFSSLQHNQQGFVISN
                     ELRQQQSELTSTWDLMLQTRINLSRSAARMMMDASNQQSSAKTDLLQNAKTTLAQAAA
                     HYANFKNMTPLPAMAEASANVDEKYQRYQAALAELIQFLDNGNMDAYFAQPTQGMQNA
                     LGEALGNYARVSENLYRQTFDQSAHDYRFAQWQLGVLAVVLVLILMVVWFGIRHALLN
                     PLARVITHIREIASGDLTKTLTVSGRNEIGELAGTVEHMQRSLIDTVTQVCEGSDAIY
                     SGTSEIAAGNTDLSSRTEQQASALEETAASMEQLTATVKQNADNARQASQLAQSASET
                     ARHGGKVVDGVVNTMHEIADSSKKIADIISVIDGIAFQTN"
     gene            complement(1361..1864)
                     /gene="cheW"
                     /locus_tag="MOX77_002077"
     CDS             complement(1361..1864)
                     /gene="cheW"
                     /locus_tag="MOX77_002077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HCA3357614.1"
                     /translation="MTGMSNVSKLAGEPSGQEFLVFTLGNEEYGIDILKVQEIRGYDQ
                     VTRIANTPAFIKGVTNLRGVIVPIVDLRVKFCEGDVEYDDNTVVIVLNLGQRVVGIVV
                     GGVSDVLSLTAEQIRPAPEFAVTLSTEYLTGLGALGERMLILVNIEKLLNSEEMALLD
                     IAASHVA"
     gene            complement(1885..3900)
                     /gene="cheA"
                     /locus_tag="MOX77_002078"
     CDS             complement(1885..3900)
                     /gene="cheA"
                     /locus_tag="MOX77_002078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheA"
                     /protein_id="HCA3357615.1"
                     /translation="MSMDISDFYQTFFDEADELLADMEQHLLDLVPESPDAEQLNAIF
                     RAAHSIKGGAGTFGFTILQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQL
                     DAYKNSEEPDAASFEYICNALRQLALEAKGETTPAVVETAALSAAIQEESVAETESPR
                     DESKLRIVLSRLKANEVDLLEEELGNLATLTDVVKGADSLSATLDGSVAEDDIVAVLC
                     FVIEADQIAFEKVVTAPVEKAQEKTEVAPVASPAVVAPAAKSAAHEHHAGREKPARER
                     ESTSIRVAVEKVDQLINLVGELVITQSMLAQRSNELDPVNHGDLITSMGQLQRNARDL
                     QESVMSIRMMPMEYVFSRFPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLT
                     HLVRNSLDHGIEMPEKRLEAGKNVVGNLILSAEHQGGNICIEVTDDGAGLNRERILAK
                     AMSQGMAVNENMTDDEVGMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQEMGGHVEI
                     QSKQGSGTTIRILLPLTLAILDGMSVRVAGEVFILPLNAVMESLQPREEDLHPLAGGE
                     RVLEVRGEYLPLVELWKVFDVDGAKTESTQGIVVILQSAGRRYALLVDQLIGQHQVVV
                     KNLESNYRKVPGISAATILGDGSVALIVDVSALQGLNREQRMAITAA"
     gene            complement(3905..4834)
                     /gene="motB"
                     /locus_tag="MOX77_002079"
     CDS             complement(3905..4834)
                     /gene="motB"
                     /locus_tag="MOX77_002079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotB"
                     /protein_id="HCA3357616.1"
                     /translation="MKNQAHPIVVVKRRRHKPHGGGAHGSWKIAYADFMTAMMAFFLV
                     MWLISISSPKELIQIAEYFRTPLATAVTGGNRIANSKSPIPGGGDDYTQQQGEVEKQP
                     NIDELKKRMEQSRLNKLRGDLDQLIESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRP
                     MFKTGSAEVEPYMRDILRAIAPVLNGIPNRISLAGHTDDFPYANGEKGYSNWELSADR
                     ANASRRELVAGGLDNGKVLRVVGMAATMRLSDRGPDDAINRRISLLVLNKQAEQAILH
                     ENAESQNEPVSVLQQPAAAPPASVPTSPKAEPR"
     gene            complement(4831..5718)
                     /gene="motA"
                     /locus_tag="MOX77_002080"
     CDS             complement(4831..5718)
                     /gene="motA"
                     /locus_tag="MOX77_002080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor stator protein MotA"
                     /protein_id="HCA3357617.1"
                     /translation="MLILLGYLVVIGTVFGGYVMTGGHLGALYQPAELVIIGGAGMGA
                     FIVGNNGKAIKGTMKAIPLLFRRSKYTKSMYMDLLALLYRLMAKSRQQGMFSLERDIE
                     NPKESEIFASYPRILADAVMLDFIVDYLRLIISGNMNTFEIEALMDEEIETHESEAEV
                     PANSLAMVGDSLPAFGIVAAVMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYG
                     FISPLATVLRQKSAETTKMMQCVKITLLSNLNGYAPPIAVEFGRKTLYSSERPSFIEL
                     EEHVRAVRNPNQQQTTEEA"
     gene            complement(5846..6424)
                     /gene="flhC"
                     /locus_tag="MOX77_002081"
     CDS             complement(5846..6424)
                     /gene="flhC"
                     /locus_tag="MOX77_002081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005127694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar transcriptional regulator FlhC"
                     /protein_id="HCA3357618.1"
                     /translation="MSEKSIVQEARDIQLAMELINLGARLQMLESETQLSRGRLIRLY
                     KELRGSPPPKGMLPFSTDWFMTWEQNIHASMFCNAWQFLLKTGLCSGVDAVIKAYRLY
                     LEQCPQPPEGSLLALTRAWTLVRFVESGLLELSSCNCCGGNFITHAHQPVGSFACSLC
                     QPPSRAVKRRKLSRDAADIIPQLLDEQIEQAV"
     gene            complement(6427..6768)
                     /gene="flhD"
                     /locus_tag="MOX77_002082"
     CDS             complement(6427..6768)
                     /gene="flhD"
                     /locus_tag="MOX77_002082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310629.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar transcriptional regulator FlhD"
                     /protein_id="HCA3357619.1"
                     /translation="MHTSELLKHIYDINLSYLLLAQRLIVQDKASAMFRLGINEEMAN
                     TLGALTLPQMVKLAETNQLVCHFRFDDHQTITRLTQDSRVDDLQQIHTGIMLSTRLLN
                     EVDDTARKKRA"
     gene            7451..7567
                     /locus_tag="MOX77_002083"
     CDS             7451..7567
                     /locus_tag="MOX77_002083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_448342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357620.1"
                     /translation="MINYDVLHINVALAHCRNAINRVKLKHNLIFLQSRSEL"
     gene            7564..7959
                     /gene="uspC"
                     /locus_tag="MOX77_002084"
     CDS             7564..7959
                     /gene="uspC"
                     /locus_tag="MOX77_002084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001766287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspC"
                     /protein_id="HCA3357621.1"
                     /translation="MSYTHILVAVAVTPESHQLLAKAVSIARPVQAKVSLITLASDPE
                     LYNQFAAPMMEDLRAVMHEETENFLKMLGEKADYPIEQTFIASGELSQHILAVCRKHH
                     VDLVICGNHNHSFFSRASCSAKVSSAPAR"
     gene            complement(8009..9430)
                     /gene="otsA"
                     /locus_tag="MOX77_002085"
     CDS             complement(8009..9430)
                     /gene="otsA"
                     /locus_tag="MOX77_002085"
                     /EC_number="2.4.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha,alpha-trehalose-phosphate synthase"
                     /protein_id="HCA3357622.1"
                     /translation="MSRLVVVSNRIAPPDNKGGAGGLAVGVLGALKAAGGLWFGWSGE
                     TGNEDEPLKKVTKGNITWASFNLSEQDYEDYYCQFSNAVLWPAFHYRLDLVQFQRPAW
                     EGYMRVNALLADKLLPLIKENDIIWVHDYHLLPFASELRKRGVNNRIGFFLHIPFPTP
                     EIFNALPPHDELLEQLCDFDLLGFQTENDRLAFLDSLSSQTRVTTRSGKQHIAWGKDF
                     QTEVYPIGIEPDEIALQAAGPLPPKLAQLKAELKNVKNIFSVERLDYSKGLPERFLAY
                     EALLENYPQHRGKIRYTQIAPTSRGEVQAYQDIRHQLETEAGRINGKYGQLGWTPLYY
                     LNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEFVAAQDPANPGVLVLSQFAGAAN
                     ELTSALIVNPYDRDDVAAALNRALTMPLAERISRHAEMLDVIVKNDINRWQERFIHDL
                     KEVTPRSPERQQQNNVATFPKLA"
     gene            complement(9405..10208)
                     /gene="otsB"
                     /locus_tag="MOX77_002086"
     CDS             complement(9405..10208)
                     /gene="otsB"
                     /locus_tag="MOX77_002086"
                     /EC_number="3.1.3.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose-phosphatase"
                     /protein_id="HCA3357623.1"
                     /translation="MAEPLTVSPELTANYAYFFDLDGTLAEIKPHPDQVVVPHKILQL
                     LDRLAAHNAGALALISGRSMTELDALAKPFRFPLAGVHGAERRDISGKTHIVRLPEAV
                     VREVEALLRSTLAALPGTELETKGMAFALHYRQAPEHEAALLALAQHVTQHWPQLALQ
                     PGKCVVEIKPKGTNKGEAIAAFMQEAPFTGRIPVFVGDDLTDEAGFGVVNHAGGISVK
                     VGVGATQAAWRLESVPDVWRWLEQINYPQQEQQVMNNRRDGYESFSRSI"
     gene            complement(10431..10607)
                     /gene="araH"
                     /locus_tag="MOX77_002087"
                     /pseudo
     CDS             complement(10431..10607)
                     /gene="araH"
                     /locus_tag="MOX77_002087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707790.1"
                     /note="Part of the ABC transporter complex AraFGH involved
                     in the high affinity transport of arabinose; incomplete;
                     partial in the middle of a contig; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="L-arabinose ABC transporter permease AraH"
     gene            complement(10842..11399)
                     /locus_tag="MOX77_002088"
     CDS             complement(10842..11399)
                     /locus_tag="MOX77_002088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DJ-1/PfpI family protein"
                     /protein_id="HCA3357624.1"
                     /translation="MKKVAVLLAPGFEEAEAIVTLDILRRLHIDVETLACAESRAVVS
                     YHDIPMVADSTLSERQQALFDAVVLPGGPQGSANLAANPAVIAFVARHDAAGKLICPI
                     CSAAARVLGAHGLLKGRRYVCSGDLWKAVPEGVYVDAPVVEDGNLISGKGLGHVFDFA
                     LTLSARLLGDDALVREQAEHIYYPW"
     gene            11949..12452
                     /locus_tag="MOX77_002089"
     CDS             11949..12452
                     /locus_tag="MOX77_002089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-heme ferritin-like protein"
                     /protein_id="HCA3357625.1"
                     /translation="MAAVGMVQKLNTPMNLEFYASNLYLHLSEWCSEHSLTGTATFLR
                     TQAQGNVTQMMRMFNFMKNAGATPIVKAIDVPGEELCSLEELFQKTLEDYQQRASTLS
                     RLADEAKALNDASTLDFLHTLEKEQQQDGVLLQTILEEVRSAKRAGLCLAQTDQHLLN
                     VVTYQHH"
     gene            12783..13118
                     /locus_tag="MOX77_002090"
     CDS             12783..13118
                     /locus_tag="MOX77_002090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HCA3357626.1"
                     /translation="MKPLIFTLSLLALTGCTITRQAQVSEASPISGIVRLTYNQPLFF
                     TSRTDDYVSHGTATRECQQMGYADAVSFGQPVGTCSIYAGSLCLNTRFTLSWQCRGVS
                     VPQIMPLYY"
     gene            13358..13855
                     /gene="ftnA"
                     /locus_tag="MOX77_002091"
     CDS             13358..13855
                     /gene="ftnA"
                     /locus_tag="MOX77_002091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000920608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-heme ferritin"
                     /protein_id="HCA3357627.1"
                     /translation="MLKTEMIDKLNEQMNLELYSSLLYQQMSAWCSYHSFEGAAAFLR
                     RHAQEEMTHMQRLFDYLTDTGSLPRINSVSSPFAEYTSLDELFRATYEHEQLITQKIN
                     ELAHAAMTSQDYPTFNFLQWYVAEQHEEEKLFKSIIDKLTLAGKSGEGLYFIDKELST
                     LDTQN"
     gene            complement(13901..14140)
                     /locus_tag="MOX77_002092"
     CDS             complement(13901..14140)
                     /locus_tag="MOX77_002092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YecH family protein"
                     /protein_id="HCA3357628.1"
                     /translation="MDSIHGHEVLNMMIESGEQYTHTSLEAAIKARFGERARFHTCSA
                     SDMTAAELVAFLAAKGKFIAVEDGFSTHESKICRH"
     gene            14367..15578
                     /gene="tyrP"
                     /locus_tag="MOX77_002093"
     CDS             14367..15578
                     /gene="tyrP"
                     /locus_tag="MOX77_002093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine transporter TyrP"
                     /protein_id="HCA3357629.1"
                     /translation="MKNRTLGSIFIVAGTTIGAGMLAMPLAAAGVGFSVTLGLLIGLW
                     ALMCYTALLLLEVYQHVPADTGLGSLAKRYLGRYGQWLTGFSMMFLMYALTAAYISGA
                     GELLASSINNWLGATLSPAAGVLLFTFVAGGVVCVGTSLVDLFNRFLFSAKIIFLVIM
                     LALLTPHIHKVNLLTLPLQQGLALSAIPVIFTSFGFHGSVPSIVSYMNGNIRRLRWVF
                     MTGSAIPLVAYIFWQLATLGSIDSPTFRGLLASHAGLNGLLQALREVVASPHVELAVH
                     LFADLALATSFLGVALGLFDYLADLFQRRSTVSGRLQTGLITFLPPLAFALFYPRGFV
                     MALGYAGVALAVLALLIPAMLVWQCRKQSPQAGYRVAGGTPALALVFICGIVVIGVQF
                     SIALGFLPDPG"
     gene            complement(15653..16318)
                     /locus_tag="MOX77_002094"
     CDS             complement(15653..16318)
                     /locus_tag="MOX77_002094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YecA family protein"
                     /protein_id="HCA3357630.1"
                     /translation="MKMEPLNENELEWLDDVLTKYNTDQVILDVAELDGLITAVLSSP
                     RPIEPEQWLVAIWGGPAYVPRWTSEKEMTRFMDLVFQHMADTAARLEDYPEQFEPLFG
                     LREVDGHELTIVEEWCFGYMRGVSLSDWSDLPDTLKPALEAIALHGTEENFALLDKMS
                     PEAFDKSVDAIRIAALELHAWWMAHPHTTPLQMPIKAEVKVGRNDPCPCGSGKKFKQC
                     CLH"
     gene            complement(16557..16882)
                     /locus_tag="MOX77_002095"
                     /pseudo
     CDS             complement(16557..16882)
                     /locus_tag="MOX77_002095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460895.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
     gene            complement(17095..18534)
                     /locus_tag="MOX77_002096"
     CDS             complement(17095..18534)
                     /locus_tag="MOX77_002096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HCA3357631.1"
                     /translation="MMMQKKTWAVLLIPLCLTACHQTTNRSTAKDEILTGSYIDPTKT
                     RFPLADYSQSVDKWIPPDSADYTIPVIDSATQQRYFSALKSHYFGMDSEAHSPWNDFY
                     ITALLKKNAAQARDASIKQFLSDGSAYWGENFRLYTSRWKEEVRGNTDTQIDNIYHAS
                     RRGIMVRESLVRALPTDDPLFNDPRQAGEGYPFDNLQMSSLRPGTPVYTLTKSKDQRW
                     QYVVSPAVTGWVHSEDIASTDQKFITQWVLLAHKQLGAFINAPVSVHAAGVYYFTGRP
                     GTILPFRHQRAGQFLIAAPVRGSNGRAFIHWVWLSGNEFTAMPWKMTPENIAVLMKAM
                     HGAPYGWGNFNFYNDCSAEVRSLLMPFGIFLPRHSSAQVESAGRVVDLSHKNPQMRID
                     YLTRYGKAFTTLVYIPGHIMLYIGNTTMNGQVVPMTYQNIWGLRPNHANSRSIIGEAV
                     FLPLLRFYPENPELISLAGKVLFKLGYIE"
     gene            complement(18748..19078)
                     /locus_tag="MOX77_002097"
                     /pseudo
     CDS             complement(18748..19078)
                     /locus_tag="MOX77_002097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460897.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(19328..19414)
                     /locus_tag="MOX77_002098"
     tRNA            complement(19328..19414)
                     /locus_tag="MOX77_002098"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(19378..19380),aa:Leu,seq:taa)
     gene            complement(19426..19499)
                     /locus_tag="MOX77_002099"
     tRNA            complement(19426..19499)
                     /locus_tag="MOX77_002099"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(19465..19467),aa:Cys,seq:gca)
     gene            complement(19552..19627)
                     /locus_tag="MOX77_002100"
     tRNA            complement(19552..19627)
                     /locus_tag="MOX77_002100"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(19592..19594),aa:Gly,seq:gcc)
     gene            complement(19779..20327)
                     /gene="pgsA"
                     /locus_tag="MOX77_002101"
     CDS             complement(19779..20327)
                     /gene="pgsA"
                     /locus_tag="MOX77_002101"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HCA3357632.1"
                     /translation="MQFNIPTLLTLFRVILIPFFVVVFYLPFAWAPMVSALIFCIAAI
                     TDWFDGFLARRWNQSTRFGAFLDPVADKVLVAIAMVLVTEHYHSWWVTLPAATMIARE
                     IIISALREWMAELGKRSSVAVSWIGKVKTTAQMVALAWLLWRPNIWVEYAGIALFFVA
                     AVLTLWSMLQYLSAARGDLLDQ"
     gene            complement(20384..22216)
                     /gene="uvrC"
                     /locus_tag="MOX77_002102"
     CDS             complement(20384..22216)
                     /gene="uvrC"
                     /locus_tag="MOX77_002102"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HCA3357633.1"
                     /translation="MSEIFDAKAFLKTVTSQPGVYRMYDAGGTVIYVGKAKDLKKRLS
                     SYFRSNLASRKTEALVAQIQHIDVTVTHTETEALLLEHNYIKLYQPRYNVLLRDDKSY
                     PFIFLSGDTHPRLAMHRGAKHAKGEYFGPFPNGYAVRETLALLQKIFPIRQCENSVYR
                     NRSRPCLQYQIGRCLGPCVAGLVSEEEYTQQVEYVRLFLSGKDDQVLTQLIARMEKAS
                     QDLAFEEAARIRDQIQAVRRVTEKQFVSNAGDDLDVIGVAFDAGMACVHVLFIRQGKV
                     LGSRSYFPKVPGGTELGEVVETFVGQFYLQGSQMRTLPGEILLDFNLSDKTLLADSLS
                     ELAGRRIHVQTKPRGDRARYLKLARTNAATALVTKLSQQSTITQRLTALATVLKLPAI
                     KRMECFDISHTMGEQTVASCVVFDANGPLRAEYRRYNIAGITPGDDYAAMNQVLRRRY
                     GKAIEESKIPDVILIDGGKGQLAQAKAVFAELDVPWDKHRPLLLGVAKGADRKAGLET
                     LFFEPEGEGFSLPPDSPALHVIQHIRDESHDHAIGGHRKKRAKVKNTSTLETIEGVGP
                     KRRQMLLKYMGGLQGLRNASVEEIAKVPGISQGLAEKIFWSLKH"
     gene            complement(22213..22869)
                     /gene="uvrY"
                     /locus_tag="MOX77_002103"
     CDS             complement(22213..22869)
                     /gene="uvrY"
                     /locus_tag="MOX77_002103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UvrY/SirA/GacA family response regulator
                     transcription factor"
                     /protein_id="HCA3357634.1"
                     /translation="MINVLLVDDHELVRAGIRRILEDIKGIKVVGEACCGEDAVKWCR
                     TNAVDVVLMDMNMPGIGGFEATRKIARSTADIKVIMLTVHTENPLPAKVMQAGAAGYL
                     SKGAAPQEVVSAIRSVYSGQRYIASDIAQQMALSQIEPAKTETPFASLSERELQIMLM
                     ITKGQKVNEISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLTSQ
                     "
     gene            23181..23336
                     /locus_tag="MOX77_002104"
     CDS             23181..23336
                     /locus_tag="MOX77_002104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_448360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357635.1"
                     /translation="MHHAATFILWVTPLLFDQKTTTAIFSVAYGILRRLNICYRTFSL
                     KHNEENK"
     gene            23333..23557
                     /locus_tag="MOX77_002105"
     CDS             23333..23557
                     /locus_tag="MOX77_002105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2594 family protein"
                     /protein_id="HCA3357636.1"
                     /translation="MSTPDFSTAENNQELATEVNCLKAMLTLMLQAMGQADAGRVILK
                     MEKQIAQMDDEAQAAVFSSTVKQIKQAYRQ"
     gene            complement(23624..24346)
                     /gene="sdiA"
                     /locus_tag="MOX77_002106"
     CDS             complement(23624..24346)
                     /gene="sdiA"
                     /locus_tag="MOX77_002106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator SdiA"
                     /protein_id="HCA3357637.1"
                     /translation="MQENDFFTWRRAMLLRFQEMAAAEDVYTELQYQTQRLEFDYYAL
                     CVRHPVPFTRPKISLRTTYPQAWVTHYQSENYFAIDPVLKPENFRQGHLHWDDVLFHE
                     AQAMWDAAQRFGLRRGVTQCVMLPNRALGFLSFSRSSLRCSSFTYDEVELRLQLLARE
                     SLSALTRLEDDMVMAPEMRFSKREKEILKWTAEGKTSSEIAIILSISENTVNFHQKNM
                     QKKFNAPNKTQIACYAAATGLI"
     gene            complement(24579..>24837)
                     /locus_tag="MOX77_002107"
     CDS             complement(24579..>24837)
                     /locus_tag="MOX77_002107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="L-cystine ABC transporter ATP-binding protein
                     YecC"
                     /protein_id="HCA3357638.1"
                     /translation="ILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMGFARD
                     VADRAIFMDQGQIVEQGPAKTLFADPQHPRTRQFLEKFLVK"
BASE COUNT         6149 a         6634 c         5796 g         6258 t
ORIGIN      
        1 atgttagtct ggaaggcaat accgtcgata acgctgataa tgtcagcgat ttttttcgaa
       61 ctgtcggcaa tttcgtgcat agtgtttact acgccgtcga ccactttgcc gccatgacgc
      121 gcggtctcgg aggcgctttg cgccagttgc gaagcctgac gggcattatc ggcgttttgc
      181 ttcacggtgg ccgtcagttg ttccatgctg gccgccgtct cctccagagc ggaggcttgt
      241 tgttcggtac gggaagagag gtcggtatta ccggcggcaa tttcactggt gccggaataa
      301 atcgcatccg aaccttcaca aacctgcgtc acggtgtcaa tcagcgagcg ttgcatatgt
      361 tcaaccgttc ccgccagttc gccaatttca ttacgtcctg agacggtgag cgttttcgtc
      421 agatcgccgc tggcaatttc acggatatga gtaatcactc gcgctaatgg gttaagcaag
      481 gcatgacgaa tgccgaacca aaccaccatc aaaatcagca ccagcacgac cgcaagaacc
      541 cccagttgcc attgcgcaaa acggtagtca tgagcacttt gatcaaatgt ctggcggtac
      601 aggttttcgc tcacccgggc gtaattgccc agcgcctcgc ccaacgcgtt ttgcattccc
      661 tgggttggct gggcgaagta ggcatccata ttgccattgt ccagaaactg aataagttcg
      721 gctaatgcgg cctgatagcg ctgatatttt tcatcgacgt tcgcgctggc ctccgccatc
      781 gctggcaatg gcgtcatgtt tttgaaattg gcgtagtgcg ccgccgcctg tgcgagggtc
      841 gtttttgcat tctggagtaa atccgttttg gcgctgctct gctggttaga agcgtccatc
      901 atcatgcgtg cggcggagcg gctcaggtta atgcgcgttt gcagcattaa gtcccatgtc
      961 gacgtgagtt cgctttgttg ctggcgtaat tcgttagaaa taacaaaacc ttgctggtta
     1021 tgctgtaatg aagaaaacag caaaccaccg gaaacaagct gtagcagtgc gaaaaccccc
     1081 agcaccatca tcagcattgt gacaacgcgg atacggttaa acataaggca ccttcctgat
     1141 aacgagttat caacgttatc ggcacctgcg gtgataactt tacttttgca aaaaggaaat
     1201 acgctgttcc ggaagacgac attgccaatg acagtgtcgc agcggcgatg ccggcgcaaa
     1261 atgcaggggc tgggcgcggg cgatgaagag gcactctcac cgctggcgga agcataacgg
     1321 tgaatattgc cggatggcgc gacgccatcc ggcaacgtta ttacgcgacg tgtgatgctg
     1381 cgatatccag cagcgccatc tcttcgctgt taagcagttt ttcgatattc accagaatca
     1441 gcatacgctc gccgagcgcg cccaatcccg tcaaatattc tgttgacaag gtcacggcaa
     1501 attctggcgc cggacggatc tgttccgccg ttaacgacag tacgtcagac acgccgccta
     1561 ccactatccc gacgacacgt tgccccagat tcagtacgat cactaccgta ttgtcatcat
     1621 actcaacgtc gccttcgcag aatttcacgc gcagatcgac aatggggaca atcacgccgc
     1681 gcaggttagt cacccctttt ataaaggccg gtgtattggc gatgcgcgtc acctggtcat
     1741 agccacggat ctcctgcact ttcaggatat cgatgccgta ctcttcattt cccagtgtaa
     1801 acaccaggaa ttcctgacct gacggctcgc cggccagttt gcttacatta ctcataccgg
     1861 tcatattatt cccttctcac tcaatcaggc ggctgtgatc gccatacgtt gttcgcggtt
     1921 taaaccctgc aatgcggaaa catcaacaat cagcgcgacg ctgccgtcgc ccaggatcgt
     1981 cgcggcggaa atccccggta ccttgcgata attgctttcc agatttttga ccaccacctg
     2041 gtgctgaccg atgagctgat cgaccagcag cgcgtaacgg cgtcccgcgc tttgcaggat
     2101 cacaacaatg ccctgcgtgg attcggtttt cgccccgtcc acgtcaaaca ctttccacaa
     2161 ttcgaccagc ggcaaatact cgccgcgaac ttccagaacc cgttcgccgc ccgccagcgg
     2221 atgaagatcc tcttcacgcg gttgcagcga ctccatcacc gcatttaacg gcaggataaa
     2281 aacttccccc gccacgcgaa ccgacatccc atcgaggatg gccagcgtca gcggcagcag
     2341 aatacgaatc gtggtgccgg agccttgttt tgactggatc tcaacgtgac cgcccatctc
     2401 ctgaatgtta cgtttcacca catccatgcc aacgccgcga ccggagacat ccgtgacctg
     2461 ttccgcagtt gagaatcccg gcgcgaagat caacatgcct acttcatcgt cggtcatgtt
     2521 ttcattcacc gccatcccct gcgacatggc cttcgccagg atacgctcac ggttaagccc
     2581 cgcgccgtca tcggtcactt caatacaaat attcccgccc tgatgttctg cagaaaggat
     2641 cagattgccg acaacatttt tccccgcctc aaggcgtttt tccggcattt caatcccgtg
     2701 gtcgagactg ttgcgcacca ggtgcgtcag cgggtcgata atgcgttcga tcaggctttt
     2761 atcaagttca gtggagctcc ccaccagcgt cagctctacc tgcttgccca gtttgcccgc
     2821 taaatcgcgt accagacgcg ggaaacggct gaagacgtac tccataggca tcatacgaat
     2881 cgacatcacc gactcttgta agtcgcgggc gttacgttgt aactgcccca tactggtaat
     2941 gagatcgccg tggtttaccg ggtccagctc gttagaacgc tgggccaaca ttgactgggt
     3001 aatcactaac tcgccgacca ggtttatgag ctgatccact ttctctaccg ccacgcgaat
     3061 gctggtggac tcgcgttcac gcgcaggttt ttcacgcccc gcatgatgtt catgggccgc
     3121 gcttttggcg gctggcgcaa cgactgccgg agacgctacc ggtgctacct cggttttctc
     3181 ttgcgctttt tcaaccggcg cggtgaccac tttttcaaaa gcgatctgat cggcctcgat
     3241 gacaaaacag agcaccgcga caatgtcatc ttccgcgacg ctgccatcca gagttgccga
     3301 cagtgaatcc gcccccttaa cgacatccgt cagagtagcc agattgccca actcttcttc
     3361 aagcagatcg acctcattgg ctttcaaccg tgaaagtaca atgcgcagtt tactctcgtc
     3421 acgaggcgat tcggtttcgg ctacgctctc ttcctggatc gccgcactta gtgccgcggt
     3481 ttctacgacc gccggcgtgg tttcgccttt cgcctccagc gccaactggc gtagcgcatt
     3541 gcagatatat tcgaagcttg cggcatccgg ctcttcggag tttttatagg cgtcgagctg
     3601 ttcctgcata atatctttcg tttccaaaaa caggttgata atgtcggtat tgagctgcat
     3661 ttcaccgcgt cgggcttcat ccagcaggtt ttccattaaa tgtgtggttt cctgcagaat
     3721 agtgaagccg aatgtgcccg cgccgccttt aatggagtgc gccgcgcgaa aaatggcgtt
     3781 cagttgttca gcgtccgggg attccggcac caaatccagc agatgctgct ccatatcagc
     3841 caacagctcg tcagcttcat caaaaaatgt ctgataaaaa tcgctaatat ccatgctcac
     3901 gctatcacct cggttccgct tttggcgatg tgggtacgct tgccggcggg gctgccgcag
     3961 gctgttgtaa tacacttacc ggctcattct ggctttcagc gttttcatgc aaaatggcct
     4021 gttccgcctg tttgtttaac accagcaggc ttatacggcg gttgatggcg tcatcaggac
     4081 cgcgatcgct cagccgcatc gtggcggcca tgccaaccac ccgtaatact tttccgttat
     4141 ccagcccgcc agcgaccagt tcgcgacgag aggcattggc gcgatcggcg gataactccc
     4201 agttgctata gcctttttcg ccgttcgcgt agggaaagtc atcggtatgg ccggccaggc
     4261 taatgcgatt aggtataccg tttaacactg gcgcaatcgc acgcaggata tcgcgcatat
     4321 acggctcaac ttcggcgctg ccggttttaa acatcgggcg gttctggctg tcgataatct
     4381 ggatgcgcaa cccctcctga actaaatcaa ttttcagatg cggacgtaac gcgcgcagtt
     4441 tgggatcgga ttcgatcagt tgatccagat cgccgcgcag tttgtttaac cgactctgct
     4501 ccatccgttt tttcagctcg tcgatattcg gctgcttttc cacttcaccc tgctgttggg
     4561 tgtaatcatc gccgccgcct ggtatcgggc tcttgctatt ggcaatccga tttccccccg
     4621 ttaccgcggt ggccaacggc gtacgaaaat attcggcaat ctgaattaat tctttagggc
     4681 tggagatgga aatcagccac atcaccagaa aaaaagccat catcgccgtc ataaaatcgg
     4741 cgtaggcaat tttccaggaa ccgtgcgccc cgccgccgtg cggtttgtgc ctgcggcgtt
     4801 ttacgacgac aatgggatga gcctgatttt tcatgcttcc tcagtcgtct gctgctggtt
     4861 tgggtttctc actgcgcgaa cgtgttcttc caactcaata aacgatggac gctcactgga
     4921 ataaagcgtt ttacgaccaa attccacggc aatcggcggc gcatagccgt tcagattaga
     4981 cagcagtgta atttttacgc actgcatcat cttagtggtt tcggcgctct tctggcgcaa
     5041 aacggtcgct aacggtgaaa tgaatccata agccagtaaa ataccgagga acgtacctac
     5101 catggcatgg gcaatcagcg cccccaactc cgctgccgga cgatcggctg aagccagagc
     5161 gtgaaccacc cccattaccg ccgcgacgat accaaaggca ggcagcgaat cccccaccat
     5221 cgccagactg ttggccggga cttccgcctc gctttcatgg gtttcaatct cttcatccat
     5281 caacgcttca atttcgaacg tattcatgtt gccgctgatg atcagacgca gataatcgac
     5341 aataaaatca agcattaccg catcggccag aatacgcgga taactggcga agatttcact
     5401 ctctttcgga ttttcaatat cgcgttcaag ggagaacatc ccctgctggc gtgatttggc
     5461 catcaggcga tagagcaacg ccagcaaatc catgtacata gatttcgtgt atttcgaacg
     5521 gcgaaataac aacgggatcg ctttcatcgt gcctttgatg gccttcccgt tgttgccgac
     5581 aatgaacgcc cccatccccg cgccgccaat gatgaccagt tcagcaggtt gatagagtgc
     5641 cccaaggtgt ccgccggtca tgacataacc gccgaaaact gtaccgataa ccaccaagta
     5701 acctaataag ataagcacga catcatcctt ccgctgttga ctatgacagg atgcgcagtc
     5761 gggcgattaa cgcgaaggca aggcaaaaaa aaaaagcagc ggtaatggct taccgctgct
     5821 ggagtgtttg tccacaccgt ttcggttaaa cagcctgttc gatctgttca tccagcagtt
     5881 gtggaataat atcggcagca tctcgggaaa gtttacgtct ttttactgcg cgggatggcg
     5941 gctggcataa actacacgca aagctgccta cgggctgatg cgcatgggta ataaagttcc
     6001 caccgcagca gttacagctc gacaattcaa gcaacccact ttcaacaaaa cgcaccagcg
     6061 tccatgcgcg agtcagcgcc aacaacgacc cttcaggcgg ttgcggacac tgctcaagat
     6121 aaagccgata agctttaatc accgcatcca caccgctgca taagccggtc ttcagtaaaa
     6181 attgccaggc gttgcagaac atggaggcat gaatattttg ctcccaggtc ataaaccagt
     6241 ctgtcgaaaa tggcagcatc cctttaggcg gcgggctacc gcgtaattct ttgtacagcc
     6301 tgatgaggcg accacggctg agctgtgttt cgctttccag catttgtaga cgagcgccaa
     6361 gattaatcaa ctccatcgcc aactggatat cgcgagcttc ctgaacaatg cttttttcgc
     6421 tcattatcat gcccttttct tacgcgccgt atcgtccact tcattgagca gacgcgttga
     6481 aagcatgata cctgtgtgaa tctgctgtaa gtcatcgacg cgcgaatcct gagtcaaacg
     6541 ggtgatcgtc tgatgatcgt caaaccggaa atgacaaact aactggttcg tctccgccag
     6601 tttgaccatc tgcggcaggg tcaacgcgcc cagtgtgttt gccatctctt cgttgatacc
     6661 gaggcggaac atcgcagatg ctttatcctg gacgatcaaa cgctgtgcaa ggagtaaata
     6721 tgacaaattg atgtcataaa tgtgttttag caactcggat gtatgcattg ttcccatcca
     6781 gaataaccaa ctttattttt gtgcgacgta gccgcacccc gtgatgtcgc cgggaaggcc
     6841 cggtaaaaga agcaaaaagg tcaaatgcat agcagcgctc agacattatg gacattgtga
     6901 cgtataacgc agcttcccac tgggattcgc cttacacgtt tacatcaatt tttacaaatg
     6961 cctaagattt ttcctaattc gacgcaactc tactcgtcag tttcgtgaca tacaacggag
     7021 cgggacggcg attttagaaa atatgcgatg cagatcacat aatttaacag aatacttacg
     7081 ataaaaccat cagtatggct tttactttgt ttaattaata acctaatatt cactttttct
     7141 attccacact gctgaatagg ggtacgtcaa caccaaattc ttttttgttt ctctctgtta
     7201 aaataacgcc aggataatag ataacaggct attatttcta ttttagaaac aattttattt
     7261 tacctttagt aaacagtggc ttaaatatta aacgttatta attaatctcg tcacagcata
     7321 cgccctcctc tgttaaaaat aagctcattt gatttaactt ttagctttcc ttgttcaccc
     7381 gtttaaataa agcatcctgg tggtgtgtaa aaagtgtctt atgccacgat tctttacata
     7441 agaataatca atgattaatt atgatgtcct tcacattaat gtggcattag cgcattgcag
     7501 aaatgcgata aacagagtaa agctaaagca caatctcata ttcttgcaat caaggagcga
     7561 gttatgagct acacccatat tcttgtcgcc gttgccgtca ccccggaaag tcaccagcta
     7621 ctggctaaag cggtctctat cgcccgccct gttcaggcga aagtaagcct gattactctc
     7681 gcttccgatc ctgaactgta taaccagttc gccgcgccca tgatggagga tttacgcgcg
     7741 gttatgcatg aagagaccga gaattttctt aaaatgctgg gggaaaaggc ggattatccg
     7801 attgaacaaa ctttcatcgc atcaggtgag ttaagccagc atattttggc tgtgtgccgc
     7861 aaacaccatg ttgatctggt catttgcggc aaccataacc acagtttctt ttcgcgcgcg
     7921 tcctgctcgg caaaagtgtc gtcagcgcca gccaggtaga tgtgttgctg gtgccgttag
     7981 cgggcgacta gtcgccgctc gcgatatctc aggccagctt agggaacgtc gccacgttgt
     8041 tctgctgctg acgctcaggg ctacgcggcg tgacctcctt taggtcatga ataaaacgct
     8101 cctgccagcg gttaatgtca tttttaacga tcacgtccag catttccgca tgacgcgaaa
     8161 tacgctcggc aaggggcatc gttaacgcac gattgagcgc cgccgccacg tcatcccgat
     8221 cgtaaggatt gacgattaac gccgacgtca gttcattcgc cgcgccggca aactgtgaca
     8281 gtaccagtac gccaggatta gcggggtcct gcgcggcgac aaactctttc gccaccaggt
     8341 tcatcccgtc acgcaacggg gtgacgagcc cgacgtctga ataacggaat atcttcatta
     8401 acagtttacg gtcgaaatgc tgattcagat aatagagcgg cgtccagccc aattgtccat
     8461 atttcccatt aatccggcct gcttctgtct caagctggtg gcgaatatcc tgatatgcct
     8521 gtacttcgcc gcgtgacgta ggcgcaattt gggtataacg aatttttccc cgatgctgcg
     8581 gatagttttc cagtagcgct tcatacgcca gaaaacgttc cggcagccct ttcgaataat
     8641 ccagccgctc aacggaaaaa atattcttca catttttcag ttccgccttg agctgcgcca
     8701 gttttggcgg caacggcccg gcagcctgca gagcaatctc atcgggctca ataccgatag
     8761 gatacacttc tgtctggaag tctttacccc acgcgatatg ctgcttgccg ctgcgagtcg
     8821 tgactcgcgt ttgactcgaa aggctatcca gaaaagccag gcgatcattt tcggtctgga
     8881 acccgagcag atcaaagtca cacaactgct ccagcagttc atcatgtggc ggtaaagcgt
     8941 taaaaatctc cggggtcggg aatggaatat gcaggaaaaa accaattcgg ttgttcacgc
     9001 cgcgtttacg cagctcgctg gcaaacggta acaggtggta gtcatgcacc caaatgatgt
     9061 cgttctcttt aatgaggggc aataacttat ccgctaataa cgcattcacc cgcatatagc
     9121 cttcccatgc aggacgctga aactgtacca ggtccagacg atagtggaac gctggccaga
     9181 gaaccgcatt ggaaaattga cagtaataat cttcgtaatc ttgttcactc aggttaaacg
     9241 atgcccaggt aatattacct tttgtcacct tttttaatgg ctcatcctcg ttacctgtct
     9301 cgccactcca gccgaaccac aacccgccag ccgcttttag cgcgccaagc acgccaacag
     9361 cgaggccgcc ggcgccgcct ttattatccg ggggggcaat tcgattagat actacgacta
     9421 aacgactcat agccatctct cctgttattc attacttgtt gttcttgttg tggataattg
     9481 atttgttcca gccagcgcca gacatcgggt acgctttcca gccgccatgc cgcctgggtt
     9541 gccccgacgc ccacttttac ggaaattccg ccagcgtgat tcaccacgcc aaagccagcc
     9601 tcatcggtca aatcgtcgcc cacaaaaacg ggaatccgtc ccgtaaaggg cgcctcctgc
     9661 ataaaggcgg caatcgcttc gcctttatta gttcccttag gtttgatttc cacaacacat
     9721 ttaccaggct gcaacgccag ttgcggccag tgctgcgtaa cgtgttgcgc aagcgccaac
     9781 agcgccgctt catgttccgg agcctgacgg tagtgcagcg caaacgccat cccctttgtc
     9841 tccagctccg ttccgggcag cgctgcaagc gtcgaacgta ataacgcctc cacctcacgg
     9901 actaccgctt caggaaggcg cacgatatgg gttttaccac tgatgtcacg acgctctgcc
     9961 ccgtgaacgc cagcgagcgg aaagcgaaaa ggcttcgcca aagcatccag ctcagtcatt
    10021 gaacgccctg aaatcaatgc cagtgcccct gcgttgtgcg ccgcgagacg gtctaacaac
    10081 tgaaggattt tatgcggtac cactacctga tcgggatgag gctttatctc tgccaatgtg
    10141 ccatcaaggt caaaaaaata cgcatagttc gcagtgagtt cgggggatac ggttaacggt
    10201 tctgccaccc tggtctcctc cttatcatca tattgagact cacaaacggt ctcattagtc
    10261 atgtaagtat agacagtgtg acgctgctcg ccatttagaa agaccatcgc cagccggggt
    10321 agcggttggc gatgacgtga agctatactg tttagttgag tgttaattca tcaaatcata
    10381 cgcttcgctt tttgcttata atggtcgaag ataactgctg ccagaaggat tcagccgcga
    10441 accacgtact gtgcaaaagg tgaaatgttg agcaggttca tcgcgttctc caccgttcct
    10501 gatatcagta cgctcgccac cacatatgag atttttccga ggccgcctct caggaaaacg
    10561 ccccctaata cgcacgcaga aataacgatt aactcataac ccagggaatt cattgacctg
    10621 ctttagcgtt ttttatgtag ggtaaaatca aacgattctt gttagagaag acgtaaaacg
    10681 gtgcactgtc tttcattcat tagataaatg ctgatggctg gaatagtttt agcggaaaat
    10741 gacataaccc agagcgaatt catcagccaa aaggcaggaa agccagcaca ttaatccata
    10801 acatcagcca gctaatcctt acggccctgg gtgaataacg attaccaggg ataatagata
    10861 tgttcagctt gttcgcgaac cagcgcatcg tctcccagca gtctggcgga aagggttagc
    10921 gcgaaatcaa agacatgacc caaccctttg ccgctaatta aattaccatc ttcaaccacg
    10981 ggcgcatcca catagacacc ttccggaacc gctttccaca ggtcgccgga acagacataa
    11041 cgacgcccct tcagcaatcc gtgagcaccc agcacccttg ccgccgcgga acagatagga
    11101 caaattaatt tgcctgccgc atcatgacgc gcaacgaaag cgatcaccgc cggattagcc
    11161 gccagattag cgctcccctg cggaccgccc ggcagcacta ccgcatcaaa aagcgcctgc
    11221 tggcgttcac tcagcgtgct gtccgcaacc ataggaatat catggtaact caccaccgcc
    11281 cgtgattcag cacacgccag cgtttcgacg tcgatatgca aacgtcgcag aatatcaaga
    11341 gtaacaatgg cctctgcttc ttcaaatcct ggcgccagta gcaccgcgac ctttttcatt
    11401 gactgctcct tgttaacgag tcacccagca aaactgcgct caaccgaata acgtgctcgt
    11461 atgattaatg atattaaaaa tgatctaccg caaaatcggc tagtttataa aaacaggcat
    11521 atttgctctc aaccgtttat gcgtgtgata tccagactgg ctaatgttta ttttattgaa
    11581 attaccatac ttgaaaggcc tatcttatga tctgaaacaa tgtttcataa accagaaaaa
    11641 atagaatatc ttttatcttt caaatagtta taagaatgac ataccaaaaa tcatttctga
    11701 tgaaaaaatc acacagctga aaatgtaaaa aaagataaac aattgcattt aaggattttc
    11761 ttattttcat tgacgcgcta ttctcattac cgatcgataa acaggaaatg agatcgcata
    11821 agggactggc ggaacggagt tcttctgcta agagtattta ttgtgcatag aggtaagaat
    11881 gtgacaacga tccgttgcat tctcgtctgt catgcacatc aacactttct ggaaataagg
    11941 atattgttat ggcagctgta ggaatggttc aaaagctcaa cacgccaatg aatcttgagt
    12001 tttacgcatc aaatctttac ctccatctaa gcgaatggtg ttctgaacac agtttaacag
    12061 gtacagccac ctttcttcgt acccaagcgc aaggcaacgt gacgcaaatg atgcgcatgt
    12121 ttaattttat gaaaaacgcc ggcgccaccc ctatcgttaa agccattgac gttccgggtg
    12181 aagagctctg ctctctggaa gaattgttcc agaaaaccct ggaggattat cagcaacgcg
    12241 ccagcacgct gtcgcgtctg gcagatgaag cgaaagcgct gaatgatgcc tcaacgctcg
    12301 attttctcca taccctggaa aaagagcagc agcaggatgg cgtactttta caaactattc
    12361 tcgaagaagt tcgcagcgct aaacgagcag ggctatgcct ggcgcaaacc gatcagcatc
    12421 tccttaacgt cgtgacctat cagcatcact gatagcggca ccccgagcga caatattgag
    12481 acgttattag ccggatagca acgcgaagca gcttatccgg cctacaccgt ttctggtctg
    12541 tttgccagag gtggcgcctg cataaatcat gacgttttgc ctacactaca catttacgaa
    12601 cacacattca aatttaatga aacaaagttt cattaaatga aaagacgctc acacattttc
    12661 tgttcccgct gtaaatcccc tgccgttacc tttaatcaag gcgaatccgt aagttattcc
    12721 agccattgac ggtgcaagac acgaggtagc atggtctgat accgaactgt cggagcgatt
    12781 ttatgaagcc tcttattttt actctttcac tgctagccct gacgggatgc accattactc
    12841 gacaagcgca ggtcagcgaa gccagcccga taagcggcat cgtgcgcctg acgtataacc
    12901 agccgctatt ttttacttca cggacagatg actatgtatc tcacggaacc gcaacacgcg
    12961 aatgccagca gatgggctat gccgatgccg tttcgtttgg tcagccggta ggaacctgta
    13021 gcatttatgc gggctcgttg tgtctgaaca cccgatttac cctctcctgg cagtgccggg
    13081 gcgtttccgt cccgcaaatc atgccgcttt attattaagg cggctggctt aacgccgaca
    13141 ccatgtacaa tagaggagag tgcagggtcg ctattgccag catgaaggtg ctggctttcc
    13201 tttattttta tacgctatac actggcgtta atgcgtttta ttcccattcg tatttttaat
    13261 aattaaattt aatattttac cttttgcaaa taataaaata acaaattata gtggcgccac
    13321 attaccgtat atcttttgct atttgtggag cggaaccatg ctgaaaacag aaatgatcga
    13381 caaactgaat gagcaaatga atctggagtt gtactcctcc ctgctctatc aacaaatgag
    13441 cgcgtggtgt agctatcaca gttttgaagg cgcggccgca tttcttcgtc gccatgcgca
    13501 agaagagatg acgcatatgc agcgcctgtt tgactacctt accgataccg gaagcctgcc
    13561 gcgcattaat agcgtttctt cgcccttcgc tgagtacacc tcactggatg aactgttccg
    13621 cgcgacctat gagcatgagc agcttattac gcaaaaaatt aatgaactgg ctcatgccgc
    13681 aatgaccagc caggattatc cgacatttaa tttcttgcag tggtatgtgg cggaacagca
    13741 tgaagaagaa aaactgttca aatctattat tgataaatta acgctggcgg gaaaaagcgg
    13801 cgaagggctt tatttcattg ataaagaact ctccaccctg gatacgcaaa attaatccag
    13861 cacgtcctta cacggtgaga cgcgctctca ccgtggcgta ttaatggcgg cagattttac
    13921 tctcatgcgt tgaaaaaccg tcctccaccg caataaactt tcctttcgcc gccagaaacg
    13981 cgaccagttc cgccgccgtc atatctgatg ctgaacaggt gtgaaatcgt gcccgctcgc
    14041 caaagcgcgc ttttattgcc gcctccagcg aggtatgcgt gtactgctcg ccagactcaa
    14101 tcatcatgtt gagtacttcg tgaccgtgaa tggaatccat aagccctcct gaataaaact
    14161 tgtagcctaa tgtgtccttg tgcgagcgac tttgcgctag cgcaggtttg cggcggttgt
    14221 ccgcgtctcc tcccatattc gcttttatgc ccggaactgt aaaatttcca gtacacctat
    14281 tgtaacgacc atttgacgaa aatagcgtaa tgccttaccc tgcgccgcgg atatcaccgt
    14341 tctttgttac cggggtagta gaaagcgtga aaaacagaac tctgggcagt atttttatcg
    14401 tggcaggcac cactatcggc gccgggatgc tggcaatgcc gctggcagcg gctggcgttg
    14461 gtttcagcgt cacgctggga ttgttgattg gtctgtgggc gctgatgtgt tataccgcgc
    14521 tactattact ggaagtatat caacatgttc cggcggatac cgggctgggc tcgttggcaa
    14581 aacgctatct tggacgttac ggacagtggc ttacgggatt cagcatgatg ttcttaatgt
    14641 atgcgctcac cgccgcctac atttccggag ccggagaatt actggcatcc agtattaata
    14701 actggcttgg cgccacgctc tcgcccgctg ccggggtgct gctgttcacc tttgttgccg
    14761 gtggggtggt gtgtgtgggc acctcgctgg tcgacctttt taaccgcttc ctgtttagcg
    14821 cgaagatcat ttttctggtc atcatgcttg cgttgctcac gccacatatt cataaagtaa
    14881 atcttcttac gcttccttta cagcaggggc tggcattgtc cgccataccg gtcattttca
    14941 cctcgtttgg ttttcacgga agcgtaccga gtattgtgag ttatatgaac ggcaacattc
    15001 gccggctgcg ttgggtcttt atgacgggta gcgccattcc gctagtggcc tatatttttt
    15061 ggcagctcgc cacgctggga agtatcgact cgccgacatt cagagggcta ctggccagcc
    15121 atgccgggtt aaatggcctg ctgcaggcgc tcagagaagt ggtcgcttcg ccacatgtcg
    15181 aactggcggt ccacctgttc gccgatctgg cgctggcgac ctcttttctg ggcgtagcgc
    15241 taggattatt tgattacctg gccgatctat tccagcgccg cagtacggtg tccggacgcc
    15301 tgcaaaccgg gctgattacc tttctgccgc cgctggcgtt tgcgcttttc tacccacgtg
    15361 gatttgtgat ggcattaggc tatgccggcg tagcgctggc agtgctggca ctactcatcc
    15421 ctgccatgct ggtctggcaa tgccgtaaac agagccctca ggcgggatat cgtgtggcag
    15481 gcggcacgcc agcgctggcg ctggtgttta tctgcggcat tgtcgtgatt ggcgtccagt
    15541 tttcgatcgc actggggttc ctgcccgatc caggttaacg ccaggcaaag attaccgggc
    15601 ccggacgccg tccaggctcg ataatcatca cgctatggcc gtttacgagc cattaatgca
    15661 ggcagcactg cttaaatttt ttgccgctcc cgcatggaca aggatcgtta cgccccactt
    15721 tcacctccgc ttttatcggc atctgtagcg gcgtcgtgtg cggatgcgcc atccaccagg
    15781 catgcagctc aagcgccgcg atacggatag cgtcaacgct tttatcgaac gcttccgggc
    15841 tcattttatc caacagcgca aagttttctt ccgtgccgtg taaggcaatc gcttccagcg
    15901 ccggttttag cgtatccggc aagtcagacc agtcggacag cgacactccg cgcatgtaac
    15961 caaagcacca ttcttcaaca atcgttaatt catggccatc aacttctcgc aggccaaaca
    16021 gcggctcgaa ctgttctgga tagtcttcaa gccgggcggc tgtgtccgcc atgtgctgga
    16081 ataccagatc cataaatcgc gtcatttctt tttcagatgt ccagcgcggt acgtacgcgg
    16141 gtccccccca tatcgcgacc agccactgtt ccggctcgat gggacgcgga gaacttagta
    16201 ccgcagtaat cagaccgtcc agctccgcga catccaaaat gacctgatcg gtattgtatt
    16261 tcgtcagcac atcatccagc cattccagct cgttctcgtt taatggttcc attttcataa
    16321 tgcttttcct cagtgatgac ttccgcctgt aggcctctta cattgcagcg gataaaaata
    16381 atttttttgc aggcagtttg gatggcaacc atcaggggcc agattaacac gaaatgagga
    16441 ggattccgga agttaacgca caaaaggagg atcagggcgc agattttccg ccaggaagcg
    16501 ctcgccccac acaaaagtga gagataggtt tctcgctata ttatactcat gctaacttat
    16561 accaccgccg cggacagata aaaccgccct ctcaaataga gcttattttc agtaaaaaag
    16621 tgtttaatga gttcgtctac cgcttctctg tcagcagaaa aggttatttc cataaacagc
    16681 gtatcgtacc ctattttgat atttttttct tacagtaaac acggatctca tcttgcacac
    16741 tcagcaacgg caggctaaat gtgtatagcg gttgcggttc ttttttcgcc gctttctcaa
    16801 aaactttagt gaccagatcc ccaagatcgc gctctgaccg ggcaccgtta ttaaaatgca
    16861 ataaattacg tctttttacc acccagcctc cagccagata ccgccaacaa taactctcac
    16921 ttcaatgtgt gaggcacata atcacatcca gaatcagctc cagatagtat ttcaaataaa
    16981 cagcccgcac tatagcgtat acttttttca gacacagttt acagggatac tatctttata
    17041 tccacgcgca cggttgcctt aatcatgtct tccgcgataa cacagtttgt caacctattc
    17101 tatataacca agcttaaaca gaaccttacc agccagcgat atcagctcag gattttcagg
    17161 ataaaaacgc agtaacggca aaaataccgc ctcaccgata atgctccggc tattagcatg
    17221 gtttgggcgc aatccccaga tattctgata agtcatcggc acgacctgcc cattcatggt
    17281 tgtgttaccg atatacagca taatatgccc tggaatatag accagcgtag taaacgcttt
    17341 tccgtatctg gtgagataat cgatccgcat ttggggattt ttatgactaa gatcgaccac
    17401 ccgtccagca gactctacct gcgcggatga atgtctgggc aggaatatgc caaacggcat
    17461 taacaggctg cggacttcgg ctgaacaatc attataaaag ttaaaatttc cccaaccgta
    17521 gggggcgccg tgcattgctt tcattagcac ggcgatattt tccggcgtca ttttccacgg
    17581 catagccgta aactcgttac cgcttagcca gacccaatgg ataaacgcgc gaccgttgct
    17641 gccgcgaact ggcgccgcaa tcaggaactg gcccgcccgt tgatgtcgga acggtaaaat
    17701 agtacccggt cgcccggtga aataatagac gcctgcggca tggacagaaa ccggcgcgtt
    17761 gataaatgcc cccagttgct tgtgagcgag caaaacccac tgtgttataa atttctgatc
    17821 cgtactggca atatcttcac tgtgaaccca gccagttacc gctggtgaaa cgacatattg
    17881 ccagcgttgg tctttgctct tcgtcagcgt atagaccggc gtaccgggac gcagcgaaga
    17941 catttgtaaa ttatcaaacg ggtacccctc gcccgcctga cggggatcgt taaagagcgg
    18001 gtcgtccgtt ggcagcgctc tgactaaact ttctctgacc ataatgcctc gccgggaggc
    18061 atgatagata ttgtcaatct gcgtatccgt attccctcta acctcctctt tccagcgaga
    18121 ggtataaagt ctgaagtttt ccccccaata agcactgccg tcgctaagaa actgcttaat
    18181 actggcatcc cgggcctgtg ctgcgttttt tttcagcaat gcggtaatat aaaaatcatt
    18241 ccacggcgag tgcgcttcac tgtccattcc gaaataatga gattttagtg cgctaaagta
    18301 gcgttgttgg gtagcactat caataaccgg aatagtgtaa tcagccgagt ccggaggtat
    18361 ccatttatca accgactgtg aataatccgc taacggaaag cgtgtttttg tcgggtcaat
    18421 atagctccct gtgagaattt catctttggc tgttgatcgg ttggtcgtct ggtggcaagc
    18481 ggtgaggcac aatggtatca ataaaacggc ccaggttttc ttttgcatca tcatctccgt
    18541 aaagcgggga aagcataata tagagactga ccaaaaccgc cattcacgaa aacccgaaat
    18601 tatctgtagt tgacctgtta ttaagacaat attgcaaaac gtgattaaag catgaagcgg
    18661 atcacattac ctagtgatga atattagttc gctatctacc tttaattaaa ttgtgcagaa
    18721 aatacccctg aacagttata tactcgttta atttgcataa atactccact ggcctgcccc
    18781 tgtttttttc agacaataca tattgtagcg cgtcagttct acttttttta tatactctgc
    18841 aaagtcattt gcatcgacgt agccaataaa attatgtgca tcacatgtcg aagaggaaag
    18901 ctcaccggga agagagtagg ttacgattgc actctcaggc tcatacaaaa taaaaaagta
    18961 gcaaagcgca acttacaatc ccaatattaa tgaagctaat aaataatttt gcattatcgg
    19021 tatatttcac tggcagacct actctcttta ataaagcagg cataaaacat atcagcattt
    19081 tttatagaga ttaatggatt ttatcggctg atttacccga cgtttagtat ttaccaggca
    19141 taagttcttg cgggtcggta gcacataact gttgtactgg cagaaatgcc gctaccgatg
    19201 ttttttactg tgtatcgcgc tggagagttc acgctcgcgg tcggcataca aactgaaagc
    19261 acaaaaaaac cacccgtagg tggtttcacg acactgctta ttgctttgat tattcttgtc
    19321 tttcccatgg tacccggagc gggacttgaa cccgcacagc gcgaacgccg agggatttta
    19381 aatcccttgt gtctaccgat tccaccatcc gggctcggga aaaattggag gcgcgttccg
    19441 gagtcgaacc ggactagacg gatttgcaat ccgctacata accgctttgt taacgcgcca
    19501 aatttttttg gcttttcagc cagcatccgc tttacgccaa tgcttttaaa ctggagcggg
    19561 aaacgagact cgaactcgcg accccgacct tggcaaggtc gtgctctacc aactgagcta
    19621 ttcccgcagt atcaagcaac tttgttaatc gcttgatttt gttatcgtct ggcaatcagt
    19681 gctgccgtcc gatgcgttgc attctactta cctgacgcac tgagtcaacg atatttttcg
    19741 tcactcacga tcgtttgctg aaatttgcgg cgaaacgatc actgatcaag caaatctccg
    19801 cgtgcagcgc tcaaatattg caacatggac cacaatgtta gcaccgctgc gacaaagaaa
    19861 agcgcgatcc cggcatactc tacccagata ttcggacgcc acaagagcca cgccagcgcc
    19921 accatctgcg cggtagtttt gactttaccg atccaggaga ccgctacact actgcgtttg
    19981 cccagctccg ccatccattc acgcagagca gagataataa tttcgcgggc gatcatcgtc
    20041 gccgcaggta acgtcaccca ccagctatga taatgctcgg tgaccagcac catggcgatc
    20101 gccaccagca ccttgtcggc gacggggtcg aggaaagcgc cgaaacgcgt actctggttc
    20161 cagcgtcgcg ccagaaagcc gtcaaaccag tcggtaatcg cggcaataca gaaaatcagc
    20221 gcgctgacca tcggcgccca ggcgaacggc aaataaaaca ccacgacaaa gaatggaatc
    20281 aggatgacgc gaaacagcgt gagcaacgta gggatattaa attgcatagt gacgggtaac
    20341 tatctgttgt cagtgaaatt acccctatgt tgctacagtg gcctcaatgt ttcaacgacc
    20401 agaagatctt ttctgccaga ccttgcgaaa tacccggcac ttttgcaatt tcttctacgc
    20461 tggcgttacg taatccttgc aaaccgccca tatatttcag cagcatctgg cgacgtttag
    20521 gcccaacgcc ttcaatagtt tccagcgtac tggtattttt aaccttcgcg cgttttttac
    20581 ggtgcccgcc gatcgcgtga tcgtgcgact catcgcgaat atgctgaata acatgcagcg
    20641 ccggcgagtc cggcggcagg ctaaacccct cgccttccgg ttcaaaaaag agtgtttcca
    20701 gaccggcttt tctgtccgcg cctttggcga cgccgagcag caaaggacga tgcttatccc
    20761 aggggacatc cagctcagcg aaaacggctt tcgcctgggc gagctgccct tttccgccgt
    20821 cgatcagaat aacatccgga atcttacttt cttctatggc cttgccataa cgccgacgta
    20881 gcacctgatt catcgccgcg tagtcatcac ccggcgtgat gcccgcgata ttataacgac
    20941 gatactcggc gcgtaacggc ccgttagcgt caaataccac acaggatgcg accgtttgct
    21001 cccccatggt atggctgatg tcaaaacatt ccatccgctt gatcgcagga agttttaata
    21061 ccgtcgccag cgcggtcaaa cgctgcgtga tggtggactg ctgcgaaagt ttagtgacta
    21121 aggccgttgc cgcgttggtc cgcgctagct tgagatagcg ggcgcgatcg ccgcgcggtt
    21181 ttgtctggac atgaatacgc cgtccggcaa gctccgacaa cgaatcggcc agcagcgttt
    21241 tatcgctcag attaaaatcg agtagtatct cgcccggtag cgtgcgcatc tggctaccct
    21301 gcaggtaaaa ctgcccgaca aaggtttcca ccacttcgcc cagttccgta ccgccaggca
    21361 cttttggaaa atagctgcgg ctgcccagta ccttaccctg gcgaataaac aacacatgca
    21421 cacaggccat acccgcatca aaagccacac cgataacgtc gagatcgtcg cccgcattgg
    21481 agacaaactg tttctccgtg acccggcgta ccgcctggat ctgatcgcga atacgcgccg
    21541 cctcttcaaa tgccaaatcc tggctggcct tttccatccg ggcaatcagc tgtgttaaga
    21601 cctggtcgtc cttgccggac aaaaacaacc ggacatactc cacctgttgc gtgtactcct
    21661 cctcgctgac cagtcctgca acgcaggggc ctaagcagcg gccaatctgg tattgcaggc
    21721 aaggacgcga gcggttgcga tacacgctgt tttcgcactg gcggataggg aaaattttct
    21781 gtaacagcgc cagcgtttcc ctaacggcat agccattagg aaatggaccg aagtactcgc
    21841 ctttcgcatg tttggcgcca cggtgcatcg ccagacgcgg atgggtatcg ccgctcagaa
    21901 aaataaaagg ataggattta tcatcacgca acaacacgtt gtaacgcggt tgatacaact
    21961 tgatgtaatt atgctcaagc agcagcgctt ccgtttcggt atgcgttacc gtgacatcaa
    22021 tgtgttgaat ttgcgcaact agcgcttcgg ttttacgcga agccaggttg ctgcgaaagt
    22081 agctggaaag acgctttttc aggtcttttg ctttaccaac atagataacc gtaccgccgg
    22141 cgtcatacat acgatagaca ccgggttggc tggtaacggt tttcaggaac gcctttgcgt
    22201 caaatatttc actcactggc ttgttaacgt ctccgcatta cacaggccat ggcggattgc
    22261 caggtgagtc agctcaacat caccatgaat gtttaattta ctgaacatac gatagcgata
    22321 gctgttcacc gttttaggac tgagattcag ctgttctgaa atctcattga ccttctggcc
    22381 cttggtgatc atcagcataa tctgcaactc gcgttcagac aaactggcga acggcgtttc
    22441 cgtttttgca ggctcaatct gactgagcgc catctgttga gcgatatcgg aggcgatata
    22501 acgttgtccg gaatacaccg aacgaatagc gctcaccacc tcctgaggcg cagcgccttt
    22561 gctgagatag ccagctgcgc cagcctgcat cactttggcg ggcaacgggt tctccgtatg
    22621 gacggtcagc atgatcactt tgatatccgc tgtcgatcgg gcaattttac gcgtcgcctc
    22681 aaagccgcca ataccgggca tgttcatatc catcagcacg acgtcaacgg cgttagtacg
    22741 gcaccatttt accgcatcct ctccgcagca cgcttcaccg acaactttaa tgccctttat
    22801 atcttcaaga atgcgtcgta tccctgcgcg caccagttcg tggtcatcaa caagaagaac
    22861 gttgatcaaa ggaatatctc cagaataggg ataacgctac tgatagttaa tcgcccttat
    22921 attagctggt tttatctcaa ctttgaaacg taaaaaaaca ccgggtattc gattttgctc
    22981 tcgtttttgg aaattatgtt gtacgtcatg tggcaactgc caacgttgta gccccttctg
    23041 acggcgctgt tccgggctgc tatttcataa tggtgacaaa aatttcacgt tccgctgtct
    23101 aaacactaat tagggaatca actttgtaac aataattaac gagtaaaata cgcgtaataa
    23161 acaaagaatg aagaaaatat atgcatcacg cggcaacgtt tattttgtgg gtaacccctc
    23221 tgctttttga tcaaaaaaca accactgcta tttttagcgt agcttatggt atactccgcc
    23281 gccttaacat ctgctatcgc acattttcac tgaaacataa cgaggaaaat aaatgagtac
    23341 gcctgatttt tccaccgctg agaataatca agaactggct actgaagtca actgcctgaa
    23401 agccatgtta acgctgatgc tgcaggcgat gggccaggcc gatgcagggc gcgtgattct
    23461 taaaatggaa aaacagatcg cgcagatgga tgatgaagca caagcggcgg tattttccag
    23521 tacggttaag caaattaaac aggcttaccg ccagtagtaa aaaaccggct gttagcatcg
    23581 ctttcagccg gtttcgcgtc tggcgcgaag catcgtcagc acgtcatatc agacctgtcg
    23641 ccgcagcgta gcaggcaatc tgtgttttat ttggcgcatt gaatttcttc tgcatgtttt
    23701 tctgatggaa gttaacggta ttttcagaaa tcgacagaat aatggcgatc tccgatgagg
    23761 tcttcccttc cgccgtccac ttcagaatct ctttctcacg tttactgaaa cgcatctcag
    23821 gcgccatcac catgtcgtct tcaagtcttg tcagcgccga aagactctcc cgcgccagca
    23881 gttgcaacct cagctccact tcatcgtagg taaacgagga gcagcgtaaa ctgctacggg
    23941 agaaagataa aaagcccagc gcccggttcg gcaacatcac acactgggtt acgcctctgc
    24001 gtaatccgaa acgctgggcg gcatcccaca tcgcctgcgc ttcatgaaat agcacgtcat
    24061 cccaatgtaa atgaccctgc ctgaaatttt ccggctttaa taccggatca atcgcgaaat
    24121 agttttcgga ctgataatgc gttacccacg cctgaggata agtggtacga agcgatattt
    24181 taggccgggt aaagggaacg ggatgacgaa cacacagggc ataataatca aattccagcc
    24241 gctgtgtctg atattgcaat tcagtataaa catcctctgc tgccgccatc tcctgaaagc
    24301 gtaacaacat tgcgcgtcgc caggtgaaga aatcattttc ctgcatattt tatggtcacg
    24361 cctttgatat tgataatcat tattatgaat gacttaaatt aacacataaa tggtgtttat
    24421 atataaggaa tatcggacga atcatagaat acttgagcgg cattacagtt tttcgacttc
    24481 cgccaaagag cgaggttaat aatctggcag aatgacttca taattattca ttgcgctcgc
    24541 ccgaggcacg gctaattcgg gcgagcgttg aaaaggtatt atttcactaa aaatttctca
    24601 aggaactggc gagtacgcgg atgctgagga tcggcgaaca aggttttcgc cggcccctgt
    24661 tcgacgattt gcccctgatc cataaatatt gcccggtcag ccacgtcacg cgcaaagccc
    24721 atttcgtgag tgacgatcac catcgtgcgc ttttcctgcg ccagctggcg aatcgtatta
    24781 agcacctcgc cgactaattc aggatcaagc gccgacgtcg gctcatcaaa cagaatc
//
LOCUS       DAGWFR010000052        24414 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.053, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000052 DAGWFR010000000
VERSION     DAGWFR010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 24414)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24414)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24414
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.053"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..134)
                     /locus_tag="MOX77_002108"
     CDS             complement(<1..134)
                     /locus_tag="MOX77_002108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xylulose 5-phosphate 3-epimerase"
                     /protein_id="HCA3357639.1"
                     /translation="MLSKQIPLGIYEKALPAGECWLERLRLAKTLGFDFVEMSVDETD
                     A"
     gene            complement(144..794)
                     /gene="ulaD"
                     /locus_tag="MOX77_002109"
     CDS             complement(144..794)
                     /gene="ulaD"
                     /locus_tag="MOX77_002109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-keto-L-gulonate-6-phosphate decarboxylase
                     UlaD"
                     /protein_id="HCA3357640.1"
                     /translation="MSLPMLQVALDNQTMDSAYETTRLIAEEVDIIEVGTILCVGEGV
                     RAVRDLKALYPHKIVLADAKIADAGKILSRMCFEANADWVTVICCADINTAKGALDVA
                     KEFNGDVQIELTGYWTWEQAQQWRDAGIQQVVYHRSCDAQAAGVAWGEADITAIKRLS
                     DMGFKVTVTGGLALEDLPLFKGIPIHVFIAGRSIRDAESPVEAARQFKRSIAQLWG"
     gene            complement(808..1272)
                     /gene="ulaC"
                     /locus_tag="MOX77_002110"
     CDS             complement(808..1272)
                     /gene="ulaC"
                     /locus_tag="MOX77_002110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate transporter subunit IIA"
                     /protein_id="HCA3357641.1"
                     /translation="MKLRDSLAENNSIRLQAEANTWQEAVKIGVDLLVAADVVEPRYY
                     QAILDGVEQFGPYFVIAPGLVMPHGRPEEGVKKTGFSLVTLKKPLEFNHEDNDPVDIL
                     ITMAAVDANTHQEVGIMQIVNLFEDEANFDRLRACRTAQEVLDLIDRTNAAA"
     gene            complement(1282..1586)
                     /gene="ulaB"
                     /locus_tag="MOX77_002111"
                     /pseudo
     CDS             complement(1282..1586)
                     /gene="ulaB"
                     /locus_tag="MOX77_002111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710059.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate transporter subunit IIB"
     gene            complement(1602..2999)
                     /gene="ulaA"
                     /locus_tag="MOX77_002112"
     CDS             complement(1602..2999)
                     /gene="ulaA"
                     /locus_tag="MOX77_002112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418614.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate transporter subunit IIC"
                     /protein_id="HCA3357642.1"
                     /translation="MEILYNIFTIFFNQVMTNAPLLLGIVTCLGYILLRKSVSVIIKG
                     TIKTIIGFMLLQAGSGILTSTFKPVVAKMSEVYGINGAISDTYASMMATIERMGDAYS
                     WVGYAVLLALALNICYVLLRRITGIRTIMLTGHIMFQQAGLIAVSFYIFGYSMWTTII
                     CTAILVSLYWGITSNMMYKPTQEVTDGCGFSIGHQQQFASWIAYKVAPFLGKKEESVE
                     DLKLPGWLNIFHDNIVSTAIVMTIFFGAILLSFGIDTVQAMAGKVHWTVYILQTGFSF
                     AVAIFIITQGVRMFVAELSEAFNGISQRLIPGAVLAIDCAAIYSFAPNAVVWGFMWGT
                     IGQLIAVGILVACGSSILIIPGFIPMFFSNATIGVFANHFGGWRAALKICLVMGMIEI
                     FGCVWAVKLTGMSAWMGMADWSILAPPMMQGFFSIGIAFMAVIIVIALAYMFFAGRAL
                     RAEEDAEKQLAEQSA"
     gene            3362..4426
                     /gene="ulaG"
                     /locus_tag="MOX77_002113"
     CDS             3362..4426
                     /gene="ulaG"
                     /locus_tag="MOX77_002113"
                     /EC_number="3.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003856017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ascorbate 6-phosphate lactonase"
                     /protein_id="HCA3357643.1"
                     /translation="MSKVQSITRESWILSTFPEWGSWLNEEIEQEQVAPGTFAMWWLG
                     CTGIWLKSEGGTNVCVDFWCGTGKQSHGNPLMKTGHQMQRMAGVKKLQPNLRTTPFVL
                     DPFAIRQIDAVLATHDHNDHIDVNVAAAVMQNCADDVPFIGPQTCVDLWVGWGVPKER
                     CIVVKPGDVVKVKDIEIHALDAFDRTALITLPADQKAAGVLPDGMDVRAVNYLFKTPG
                     GNLYHSGDSHYSNYYAKHGNEHQIDVALGSYGENPRGITDKMTSADILRMAESLNTKV
                     VIPFHHDIWSNFQADPQEIRVLWEMKKDRLKYGFKPFIWQVGGKFTWPLDKDNFEYHY
                     PRGFDDCFTIEPDLPFKSFL"
     gene            4531..5286
                     /gene="ulaR"
                     /locus_tag="MOX77_002114"
     CDS             4531..5286
                     /gene="ulaR"
                     /locus_tag="MOX77_002114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator UlaR"
                     /protein_id="HCA3357644.1"
                     /translation="MTEAQRHQILLDMLAQLGFVTVENVIERLGISPATARRDINKLD
                     ESGKLKKVRNGAEAITQQRPRWTPMNLHQAQNHDEKVRIAKAASQLVNPGESVVINCG
                     STAFLLGREMCGKPVQIITNYLPLANYLIDQEHDSVIIMGGQYNKSQSITLSPQGSEN
                     SLYAGHWMFTSGKGLTADGLYKTDMLTAMAEQKMLSVVGKLVALVDSSKIGERAGMLF
                     SRADQIAMLITGKNANPQVLQQLEAQGVSILRV"
     gene            complement(5283..6032)
                     /gene="yjfP"
                     /locus_tag="MOX77_002115"
     CDS             complement(5283..6032)
                     /gene="yjfP"
                     /locus_tag="MOX77_002115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase"
                     /protein_id="HCA3357645.1"
                     /translation="MIAIETRQLAGGVVLHAFPEGKRAVPLPCVVFYHGFTSSSLVYS
                     YFAVALAQAGFRVVMPDAPEHGARFGGDSQGRIHRFWQILHQNMQEFTTLRAAIQAEN
                     WLLDGRLAVGGASMGGMTALGIMTRHREVKCGASLMGSGYFTGLARTLFPPLSPQNPA
                     QQAEFDNIIAPLREWEVTHQLERLADRPLLLWHGQEDDVVPAIETFRLQQALAGAKLD
                     KHVTCLWAAGVRHRITPEALSATVAFFRQHL"
     gene            6216..6545
                     /gene="bsmA"
                     /locus_tag="MOX77_002116"
     CDS             6216..6545
                     /gene="bsmA"
                     /locus_tag="MOX77_002116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm peroxide resistance protein BsmA"
                     /protein_id="HCA3357646.1"
                     /translation="MIIRKRDRVMRRFAPLIAALLLSACSMLQGTPQPAPPVADHPQE
                     IRRDQTQGLQRMGTVSALVRGSPDDAIDEIRAKAAAAKADYYVILMVDETVVTGQWYS
                     QAILYRQ"
     gene            6676..6951
                     /locus_tag="MOX77_002117"
     CDS             6676..6951
                     /locus_tag="MOX77_002117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005134428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1471 domain-containing protein"
                     /protein_id="HCA3357647.1"
                     /translation="MKQELALSSLLLSAGLVSTTAQSAEFASADCVTGLNEIGLISVS
                     NVAGNPQDVERIIALKADEQGASWYRIIQMYEEQQSNNWRVQAILYA"
     gene            complement(6996..8618)
                     /locus_tag="MOX77_002118"
     CDS             complement(6996..8618)
                     /locus_tag="MOX77_002118"
                     /EC_number="1.3.8.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463238.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isovaleryl-CoA dehydrogenase"
                     /protein_id="HCA3357648.1"
                     /translation="MSWQTHTVFNQPAPLNNSNLFLSDGALCEAVSREGAGWDSDLLA
                     SIGQQLGTAESLELGRLANAHPPELLRYDPQGQRLDDVRFHPAWHLLMQGLCANRVHY
                     LAWEEEARAGSFVARAARFVLHAQVEAGTLCPVTMTFAATPLLLQMLPATFHDWLAPL
                     RSDRYDSHLLPGGQKRGLLIGMGMTEKQGGSDVLSNTTHAERLADDSYRLVGHKWFFS
                     VPQSDAHLVLAQAKGGLSCFFVPRFLPDGQRNSVRLERLKDKLGNRSNASAEVEFQDT
                     VGWRLGEEGEGIRHILKMGGMTRLDCALGSHGLMRRAFSVAIYHAHQRQAFGKPLIEQ
                     PLMRQTLSRMALCLEGQTALLFRLARAWEQRREAKEALWARLFTPAAKFAICKQGIPF
                     VAEAMEVLGGMGYCEESELPRLYREMPVNSIWEGSGNIMCLDVLRVLTKQHGVYDVLS
                     EAFAEVKGQDRHYDRAVRQLQQRLRKPDEAMGREITQQLFLLGCGAEMLRHASPPLAQ
                     AWCQMMLDTRGEMPLPAQVQNDLLLRATGGLR"
     gene            complement(8703..9866)
                     /locus_tag="MOX77_002119"
     CDS             complement(8703..9866)
                     /locus_tag="MOX77_002119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathionylspermidine synthase family protein"
                     /protein_id="HCA3357649.1"
                     /translation="MLRHNVPVRRDLDKIACDHGFDFHVIDNEIYWDESRAYRFTLRQ
                     IEEQIEKPTAELHQMCLEVVERAVRDEQIMQQLAIPPLYWDVIAESWRSRDPSLYGRM
                     DFVWCGKDPVKLLEYNADTPTSLYESSYFQWLWLEDARRSGAIPRDADQYNAIQERLI
                     ARFSELYSREPLYFCCCEDTDEDRTTVLYLQDCAQQAGQETRFIYIEELGLGVGGVLT
                     DLDDNVIRRAFKLYPLEWMMRDDNGPLLRKRREQWIEPLWKSILSNKGLLPLLWRFFP
                     GHPNLLPAWFEGEKSLAAPGESSVRKPIYSREGGNVTIFDERQNVIDHADGDYADEPM
                     IYQAFQPLPRFGDSYTLIGSWIIDDEASGMGIREDNTLITKDTSRFVPHYIAG"
     gene            complement(9869..10507)
                     /locus_tag="MOX77_002120"
     CDS             complement(9869..10507)
                     /locus_tag="MOX77_002120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1190 domain-containing protein"
                     /protein_id="HCA3357650.1"
                     /translation="MAKKRKSRSTSGVGHSAIRRIAEPVNPFERQRNRYTPKYLTLAI
                     MGGAAFFLLKGYGDGSNSDNDGDGTFYATVNDCIDDGNSASVCADGWNNAKTEFYANV
                     PKQLTQESCQSQFGDCYFDITERSWVPVLSGFLLSRAIRQNRDEQYIYSSGGSSYVSR
                     PVWRTTSGDYAWRSGTGKSDTVTSPGYIIRKASTVSRGGYGRSSSARGHWGG"
     gene            complement(10517..10915)
                     /locus_tag="MOX77_002121"
     CDS             complement(10517..10915)
                     /locus_tag="MOX77_002121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF350 domain-containing protein"
                     /protein_id="HCA3357651.1"
                     /translation="MHILDALLAFCAYFFIGAAMIIVFLFIYSKITPHNEWQLIKNNN
                     TAASLAFSGTLLGYVIPLSSAAINSVSIPDYFAWGGIALVIQLLIYGCVRLYMPTLSE
                     KIIHHNVAAGLFMGTAALAGGIFNAACMTW"
     gene            complement(10933..11616)
                     /locus_tag="MOX77_002122"
     CDS             complement(10933..11616)
                     /locus_tag="MOX77_002122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463234.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjfK family protein"
                     /protein_id="HCA3357652.1"
                     /translation="MARDRGSPMMQFFQRLLGKTSTPAPIRGPLGLHLNAGFTLDTLA
                     FRLLESSLLVALPGEKYTVAAASRIDLGGGSQIFRYYTSGDEFLQINTTGGTDVDDID
                     DIKLFVYEESFGINEERHWRSAIAPAAIGPMTLNWQERRWQRFFNHEEPGNIEPVYML
                     EKVENQQAEKWDVHNFTMGFQRQVTDDAWEYLLLNGEESFNERGEPEWVFSRALGVDI
                     PLTSLTVIG"
     gene            complement(11840..12538)
                     /locus_tag="MOX77_002123"
                     /pseudo
     CDS             complement(11840..12538)
                     /locus_tag="MOX77_002123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463232.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PspA/IM30 family protein"
     gene            complement(12553..12957)
                     /locus_tag="MOX77_002124"
     CDS             complement(12553..12957)
                     /locus_tag="MOX77_002124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2170 family protein"
                     /protein_id="HCA3357653.1"
                     /translation="MAWTPRTLADALNNIAELDIDIENNESSLIIKMNDYGDLPLTVL
                     FTSQQIVIETYICPVNTIRDTAEFNLFLLRNQKVLPLSSVGIALVKQEEYYVAFGALS
                     LNSSLADVTLEITTLVENALDIAEITQVYSQE"
     gene            complement(13089..13820)
                     /gene="rlmB"
                     /locus_tag="MOX77_002125"
     CDS             complement(13089..13820)
                     /gene="rlmB"
                     /locus_tag="MOX77_002125"
                     /EC_number="2.1.1.185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HCA3357654.1"
                     /translation="MSEMIYGIHAVQALLERAPERFQEAFILKGREDKRLLPLIHALE
                     SQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIALHDRPFLLILDG
                     VTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLART
                     MRMLQEENIWIVGTAGEADHTLYQSKMPGRMALVMGAEGEGMRRLTREHCDELISIPM
                     AGSVSSLNVSVATGICLFEAVRQRT"
     gene            complement(13911..16349)
                     /gene="rnr"
                     /locus_tag="MOX77_002126"
     CDS             complement(13911..16349)
                     /gene="rnr"
                     /locus_tag="MOX77_002126"
                     /EC_number="3.1.13.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HCA3357655.1"
                     /translation="MSQDPFQEREAEKYANPIPSREFILEHLTKREKPASREELAVEL
                     NIEGEEQLEALRRRLRAMERDGQLVFTRRQCYALPERLDLLKGTVIGHRDGYGFLRVE
                     GRKDDLYLSSEQMKTCIHGDQVLAQPLGADRKGRREARIVRVLVPKTSQIVGRYFTDA
                     GVGFVVPDDSRLSFDILIPPEDVMGARMGFVVVVELTQRPTRRTKAVGKIVEVLGDNM
                     GTGMAVDMALRTHEIPYIWPQAVEQQVAGLKEEVPEEAKVGRVDLRDLPLVTIDGEDA
                     RDFDDAVYCEKKRGGGWRLWVAIADVSYYVRPPTPLDREARNRGTSVYFPSQVVPMLP
                     EVLSNGLCSLNPQVDRLCMVCEMTISAKGRLTGYKFYEAVMSSHARLTYTKVWHMLQG
                     DQDLREQYAPLVKHIEELHNLYKVLDKAREERGGISFESEEAKFIFNAERRIERIEQT
                     QRNDAHKLIEECMIMANISAARFVEKAKEPALFRIHDKPTTEAITSFRSVLAELGLEL
                     PGGNKPEPRDYAELLESIADRPDAEMLQTMLLRSMKQAIYDPENRGHFGLALQSYAHF
                     TSPIRRYPDLSLHRAIKYLLAKEQGNKGNTTETGGYHYSMEEMLQLGQHCSMAERRAD
                     EATRDVSDWLKCDFMLDQVGNVFKGVIASVTGFGFFVRLDELFIDGLVHVSSLDNDYY
                     RFDQVGQRLIGESGGQTYRLGDRVEVRVEAVNMDERKIDFSLISSERAPRNVGKTARE
                     KAKKGESKNAGKRRQVGKKVNFEPDSAFRGEKKAKPKAAKKDARKAKKPSAKTQKIAA
                     ATKAKRAAKKKAAE"
     gene            complement(16387..16812)
                     /gene="nsrR"
                     /locus_tag="MOX77_002127"
     CDS             complement(16387..16812)
                     /gene="nsrR"
                     /locus_tag="MOX77_002127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005134424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitric oxide-sensing transcriptional repressor
                     NsrR"
                     /protein_id="HCA3357656.1"
                     /translation="MQLTSFTDYGLRALIYMASLPDGRMTSISEVTEVYDVSRNHMVK
                     IINQLSRAGFVTAVRGKNGGIRLGKPANTICIGDVVRELEPLSLVNCSSEFCHITPAC
                     RLKQALSKAVQSFLKELDNYTLADLVEENQPLYKLLLVE"
     gene            complement(17032..18330)
                     /gene="purA"
                     /locus_tag="MOX77_002128"
     CDS             complement(17032..18330)
                     /gene="purA"
                     /locus_tag="MOX77_002128"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019842885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HCA3357657.1"
                     /translation="MGNNVVVLGTQWGDEGKGKIVDLLTERAKYVVRYQGGHNAGHTL
                     VINGEKTVLHLIPSGILRENVTSIIGNGVVLSPSALMKEMKELEDRGIPVRERLLLSE
                     ACPLILDYHVALDNAREKARGAKAIGTTGRGIGPAYEDKVARRGLRVGDLFDKETFAE
                     KLKEVMEYHNFQLVNYYKAEAVDYQKVLDDTMAVADILTSMVVDVSDLLDQARQRGDF
                     VMFEGAQGTLLDIDHGTYPYVTSSNTTAGGVATGSGLGPRYVDYVLGILKAYSTRVGA
                     GPFPTELFDETGEFLCKQGNEYGATTGRRRRTGWLDTVAVRRAVQLNSLSGFCLTKLD
                     VLDGLKEVKLCVAYRMPDGREVTTTPLAADDWKGVEPIYETMPGWSESTFGVKDRSGL
                     PQAALNYIKRIEELTGVPIDIISTGPDRTETMILRDPFDA"
     gene            complement(18433..18630)
                     /locus_tag="MOX77_002129"
     CDS             complement(18433..18630)
                     /locus_tag="MOX77_002129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2065 family protein"
                     /protein_id="HCA3357658.1"
                     /translation="MNSTIWLALALVLVLEGLGPMLYPGAWKKMVSALAQLPENVLRR
                     FGGGLVVAGVVVYYMLRKTIG"
     gene            complement(18709..19713)
                     /gene="hflC"
                     /locus_tag="MOX77_002130"
     CDS             complement(18709..19713)
                     /gene="hflC"
                     /locus_tag="MOX77_002130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease modulator HflC"
                     /protein_id="HCA3357659.1"
                     /translation="MRKSVIAIIIIVLVVLYMSVFVVKEGERGITLRFGKVLRDDENK
                     PLVYAPGLHFKIPFIESVKMLDARIQTMDNQADRFVTKEKKDLIVDSYIKWRISDFSR
                     YYLATGGGDISQAEVLLKRKFSDRLRSEIGRLDVKDIVTDSRGRLTLEVRDALNSGSA
                     GTDDEVATPAADDAIAEAAERVTAETKGKVPVINPNSMAALGIEVVDVRIKQINLPTE
                     VSEAIYNRMRAEREAVARRHRSQGQEEAEKLRAAADYEVTKTLAEAERQGRIMRGEGD
                     AEAAKLFADAFSQDPDFYAFIRSLRAYEKSFEGNQDVMVLSPDSDFFRYMKTPSSTTR
                     "
     gene            complement(19716..20975)
                     /gene="hflK"
                     /locus_tag="MOX77_002131"
     CDS             complement(19716..20975)
                     /gene="hflK"
                     /locus_tag="MOX77_002131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsH protease activity modulator HflK"
                     /protein_id="HCA3357660.1"
                     /translation="MAWNQPGNNGQDRDPWGSSKPGSNSGGNGNKGGRDQGPPDLDDI
                     FRKLSKKLGGFGGGKGTGSGGGSSSQGPRPQLGGRIVAIAAAAVVIIWAASGFYTIKE
                     AERGVVTRFGKFSHLVEPGLNWKPTFIDDVTPVNVEAVRELAASGVMLTSDENVVRVE
                     MNVQYRVTDPQKYLFSVTSPDDSLRQATDSALRGVIGKYTMDRILTEGRTVIRSDTQR
                     ELEETIKPYNMGITLLDVNFQAARPPEEMKAAFDDAIAARENEQQYIREAEAYTNEVQ
                     PRANGQAQRILEEARAYKTQTILEAQGEVARFAKILPEYKAAPQITRERLYIETMEKV
                     LSHTRKVLVNDKSGNLMVLPLDQMLKGGNAPAAKSDNSASNLLRLPPSTKSNASGASN
                     TSSSNQGDIMDQRRANAQRNDYQRQGE"
     gene            complement(21190..22470)
                     /gene="hflX"
                     /locus_tag="MOX77_002132"
     CDS             complement(21190..22470)
                     /gene="hflX"
                     /locus_tag="MOX77_002132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HCA3357661.1"
                     /translation="MFDRYDAGEQAVLVHIYFSQDKDMEDLQEFESLVSSAGVEAMQV
                     ITGSRKAPHPKYFVGEGKAVEIAEAVKATGAAVVLFDHALSPAQERNLERLCECRVID
                     RTGLILDIFAQRARTHEGKLQVELAQLRHLATRLVRGWTHLERQKGGIGLRGPGETQL
                     ETDRRLLRNRIVQIQSRLEKVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNQIT
                     EARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHLPYDLVAAFKATLQETRQ
                     ATLLLHVVDAADVRVQENIEAVNTVLEEIDAHEIPTLMVMNKIDMLDDFEPRIDRDEE
                     NKPIRVWLSAQSGVGIPQLFQALTERLSGEVAQHTLRLLPQEGRLRSRFYQLQAIEKE
                     WMEEDGSVSLQVRMPIVDWRRLCKQEPALIEYVI"
     gene            complement(22542..22850)
                     /gene="hfq"
                     /locus_tag="MOX77_002133"
     CDS             complement(22542..22850)
                     /gene="hfq"
                     /locus_tag="MOX77_002133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HCA3357662.1"
                     /translation="MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVI
                     LLKNTVSQMVYKHAISTVVPSRPVSHHSNNAGGGASNNYHHGSNAQGSTAQQDSEETE
                     "
     gene            complement(22933..23883)
                     /gene="miaA"
                     /locus_tag="MOX77_002134"
     CDS             complement(22933..23883)
                     /gene="miaA"
                     /locus_tag="MOX77_002134"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HCA3357663.1"
                     /translation="MNDVSKVSLPKAIFLMGPTASGKTALAIELRKVLPVELISVDSA
                     LIYRGMDIGTAKPNADELKAAPHRLLDIRDPSQAYSAADFRRDALAQMAEITAAGRIP
                     LLVGGTMLYFKALLEGLSPLPSADPEVRSRIEQQAAELGWEALHQQLQEIDPVAAARI
                     HPNDPQRLSRALEVFFISGKTLTELTQTSGDALPYQVHQFAIAPASRELLHQRIELRF
                     HQMLASGFEAEVRALFARGDLHTDLPSIRCVGYRQMWSYIEGEISYDEMVYRGVCSTR
                     QLAKRQMTWLRGWEGVRWLDSENPDRARKEVLQVVGAIAD"
     gene            complement(23876..>24414)
                     /locus_tag="MOX77_002135"
     CDS             complement(23876..>24414)
                     /locus_tag="MOX77_002135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA mismatch repair protein MutL"
                     /protein_id="HCA3357664.1"
                     /translation="VLTIVGGDCALLEHAGTIQLLSLPVAERWLRQAQLTPGQSPVCA
                     QPLLIPLRLKVSADEKAALQKAQSLLGELGIEFQSDAQHVTIRAVPLPLRQQNLQILI
                     PELIGYLAQQTTFATVNIAQWIARNVQSEHPQWSMAQAISLLADVERLCPQLVKAPPG
                     GLLQPVDLHSAMNALKHE"
BASE COUNT         5738 a         6926 c         5989 g         5761 t
ORIGIN      
        1 gcgtcggtct cgtccaccga catttcaacg aagtcaaaac ccagcgtttt cgccagccgc
       61 aggcgttcca gccagcactc cccggcaggg agcgcttttt catagatgcc gagcggaatt
      121 tgtttcgaca gcatagccgc tccttagccc cacagttggg caatggagcg tttgaactgc
      181 cgtgcggctt ctaccggcga ttcagcatcg cgaatgctgc ggccagcaat aaagacatgg
      241 atcggaatgc ctttgaacag cggcaggtct tccagcgcca gtccgccggt cacggtcact
      301 ttaaagccca tatcggacag ccgtttaatc gcagtaatat ccgcttcacc ccacgccacg
      361 cctgcggcct gcgcgtcgca gctgcggtgg taaaccactt gctgaatgcc cgcatcgcgc
      421 cactgctgcg cctgttccca ggtccagtaa ccggtcagtt caatctgcac gtcgccgtta
      481 aactcttttg ccacatccag cgcgcctttc gcggtgttga tatccgcaca gcaaatcacg
      541 gtcacccagt ccgcgttggc ttcgaagcac atacgagaaa ggattttgcc cgcatcggca
      601 attttggcat ctgccagcac gattttgtgc gggtaaagcg ctttcagatc gcgaaccgca
      661 cgcacgcctt cgcccacgca cagaatggtg cccacttcga taatgtcgac ttcttcggca
      721 atcaggcgag tggtttcgta ggcgctatcc atagtctggt tgtccagcgc gacttgcaac
      781 atcggtaatg acatgttcaa ttccttctta agctgccgcg ttggtgcggt caatgagatc
      841 caggacttcc tgcgcggtac ggcaggcgcg taaacggtca aaattggctt cgtcttcaaa
      901 caggttgacg atctgcatga tgcccacttc ctggtgagtg ttggcatcaa ccgccgccat
      961 agtgatcaga atatcgaccg ggtcgttatc ttcgtggttg aactccagcg gctttttcag
     1021 cgtcaccagt gagaaaccgg ttttcttcac gccctcttcc ggacgcccgt gcggcattac
     1081 cagccccgga gcgataacga aataagggcc gaactgttcc acgccatcga gaatcgcctg
     1141 gtagtaacgc ggctcgacaa cgtctgccgc caccagcaaa tccacaccaa tttttacggc
     1201 ttcctgccag gtattagctt cagcctgcaa gcggatagaa ttattctccg ccagcgaatc
     1261 acgtaatttc atgttgcgtc cttacttcac gtcctgtgga aaatgcgctt tgatcacttc
     1321 cagcaatttc gggccgaagt ctgcgggcga tagcatgttg cgcacgccaa ccacatattt
     1381 gttgcccgtc acggtgattt cgcctgcaat gtgtgtggaa gcgatgatga tatccgcgcc
     1441 gctcaactcg cttttgtact cgccaaccgc gcagctgttt accgtgtggt cgatattgga
     1501 ttgggttaaa actggtccac tttcattttc atgatcatgg aactgccctg tccgttgcca
     1561 cacacagcca gaatacgtac ggtcataatc aaaactcctt attaagcaga ctgttctgcc
     1621 agttgttttt ctgcatcttc ttctgcgcgc agtgcgcggc cagcgaagaa catataagcc
     1681 agtgcaatta caatgatgac ggccataaag gcgataccga tggagaagaa gccctgcatc
     1741 atcggcggcg ccagaatcga ccagtccgcc atacccatcc aggcgctcat ccccgtgagt
     1801 ttcaccgccc agacgcaacc aaagatttca atcatcccca tcaccagaca aattttcagc
     1861 gccgcacgcc agccgccgaa gtggttagcg aacacgccga tagtggcgtt agagaagaac
     1921 atcgggataa agccaggaat aatcaggatc gaggagccgc aggcaaccag gatgccaacc
     1981 gcaatcagct gaccgatggt gccccacata aagccccaga ctacggcgtt cggcgcgaag
     2041 ctatagatag ccgcacagtc aatcgccaga accgcacctg ggatcaggcg ctgggagata
     2101 ccgttaaacg cttcagagag ttccgccaca aacatgcgca cgccctgagt gatgatgaag
     2161 atcgccaccg caaaggagaa accggtttgc aggatgtaga ccgtccagtg cactttgccc
     2221 gccatcgcct gcacggtgtc gataccgaag gagagcagaa tggcaccaaa gaagatggtc
     2281 attacaatcg ccgtagaaac gatgttgtcg tggaagatat tcagccagcc cggcaatttg
     2341 aggtcttcaa cgctttcctc ttttttgccc aggaacggcg cgactttata ggcaatccag
     2401 gaagcaaact gctgctggtg accaatggag aaaccgcagc cgtccgtcac ttcttgggtg
     2461 ggcttataca tcatgttgga agtgatgccc cagtacaggg aaaccagtat cgccgtgcag
     2521 ataatggtgg tccacatgga atagccgaag atatagaaag agaccgcaat cagccccgcc
     2581 tgctggaaca tgatgtgccc ggtcaacatg atggtgcgaa taccggtaat gcgtcgcaat
     2641 aagacgtaac aaatattcag cgccagcgcg agcaacaccg cgtagcctac ccaactatac
     2701 gcatcgccca tccgttcgat cgttgccatc atcgaagcat aggtatcgga aatcgcgccg
     2761 ttgataccgt agacctcaga cattttcgcc accaccggtt taaaggtgct ggtcagaatg
     2821 ccggacccgg cctgtagcag catgaagcca atgatggttt tgatcgtccc tttgatgatc
     2881 acgctgacgc ttttgcgcaa caggatatag cccaggcagg tcacaatacc cagtaatagc
     2941 ggggcattag tcattacctg attaaagaaa atggtaaaga tgttgtagag gatctccata
     3001 acgatctccg gcagataagg ttgctgagtc acaggcgctc aggataatgt cccttcactt
     3061 taattttcaa aagtaatcac aacaagatta aatttgatta aatgtgacgt agcgcgcaaa
     3121 taattagcac acttaataca tggtttactt ataggtaact cattttttca ttaaaataag
     3181 taaaatcata aagatgccaa cattcacatg acgccagaca agattaaatc ttcttctgac
     3241 tgcgttctct cctgccaaaa agtcaaaaaa tagcccattg ccttcttgag aaaatagtgt
     3301 caggattaat caaaacaaat cacgttttga accattttga acaaacatga aggtaaatgc
     3361 gatgagtaaa gtacaaagca tcacgcgtga atcatggatt ctgagcacgt ttccggagtg
     3421 gggaagctgg ctgaacgaag agattgaaca agagcaggtc gcgccgggta cgttcgctat
     3481 gtggtggctg ggctgtaccg ggatctggct aaaatctgaa ggcggcacta acgtatgcgt
     3541 cgatttctgg tgcggtaccg gtaaacagag ccacggtaat ccgttgatga aaaccggtca
     3601 ccagatgcag cgtatggctg gcgtcaaaaa attacagcct aacctgcgca ccacgccgtt
     3661 tgttctcgat cctttcgcta tccgtcagat cgacgccgtc ctggcgaccc acgaccataa
     3721 cgatcacatt gacgtcaatg tcgcggctgc cgtaatgcag aattgcgccg atgatgttcc
     3781 gtttatcggc ccgcagacct gcgtggattt atgggttggc tggggcgtgc cgaaagaacg
     3841 ctgcatcgtg gtaaaaccgg gcgatgtcgt aaaagtgaaa gatattgaaa ttcacgcgct
     3901 tgatgccttt gaccgcaccg cattaatcac cctgcccgcc gatcagaaag ccgctggcgt
     3961 actgccggac ggcatggatg tacgcgcggt taactatctg tttaaaacgc cgggcggcaa
     4021 tctctatcac agcggcgatt ctcactattc caactattac gcgaaacacg gcaacgaaca
     4081 tcaaattgat gtcgcgcttg gttcctatgg cgaaaacccg cgcggtatta cggacaaaat
     4141 gaccagcgcg gatattctac gcatggcgga gtcgctgaac accaaagtgg tgatcccgtt
     4201 ccatcacgat atctggtcga acttccaggc cgatccacag gagatccgcg tgttatggga
     4261 aatgaagaaa gatcgcctga agtatggttt taaaccgttt atctggcagg ttggcggcaa
     4321 gtttacctgg ccgttggata aagacaattt cgaataccac tatccgcgtg gttttgacga
     4381 ttgctttacc attgaacccg atctaccatt caaatccttc ctgtgagtcg atatcatgcc
     4441 gggattaccc ggcatttttt ccatttactt tagtatttcc aggctatttc aaatatcatc
     4501 ttttcaaatc aatttgtatc ggaatagctc atgactgaag cacaaagaca tcaaatactg
     4561 ctggatatgc tggcacagtt gggctttgtt accgtcgaaa acgtgattga gcgtctggga
     4621 atctccccgg cgacggcgcg ccgcgacatc aacaagctcg acgaaagcgg aaaacttaaa
     4681 aaagtgcgca acggcgcaga ggccattacc caacagcggc cccgctggac gccgatgaat
     4741 ctgcaccagg cgcaaaacca cgatgaaaaa gtacgcatcg cgaaagcggc gtcgcagctg
     4801 gtaaacccgg gtgagagcgt agtgattaac tgcggctcca ccgctttcct gctggggcgc
     4861 gaaatgtgcg ggaagccggt acagatcatt accaactatc tgccgctggc gaattatctg
     4921 atcgatcaag agcatgacag cgtgattatc atggggggtc agtacaacaa aagccagtcg
     4981 attaccctga gcccgcaggg aagtgaaaac agtctctatg ctggccactg gatgtttacc
     5041 agcggaaagg gcttaactgc ggatggcctg tacaagaccg atatgctaac cgccatggcg
     5101 gaacaaaaaa tgctcagcgt cgtcgggaaa ctggtcgcgc tggtcgatag cagtaaaatt
     5161 ggcgagcgcg cgggaatgct gttcagccga gccgatcaga tcgctatgct gattaccggc
     5221 aaaaatgcca atccgcaggt tttgcaacag cttgaagccc agggtgtaag catactccgc
     5281 gtttaaagat gctgtcggaa aaacgctacc gtcgccgaca acgcttctgg cgtaatgcga
     5341 tgccgcacgc ctgcggccca taaacaggtc acatgcttat ccagcttcgc cccggcgagt
     5401 gcctgctgga gccggaaggt ttcgatagca ggcaccacgt catcctcctg accatgccac
     5461 aacagaagcg gcctgtcggc cagtcgctct aactgatgtg tgacttccca ttcacgtagc
     5521 ggcgcgatga tattgtcgaa ttccgcctgc tgtgccgggt tctgcgggga taacggcggg
     5581 aaaagcgtcc gggcaagccc ggtaaaatag cccgacccca ttaaactggc cccgcatttt
     5641 acctcacggt gacgcgtcat aatgcccagc gccgtcatac cgcccatgga tgcgccgccc
     5701 accgccaacc gcccgtcaag tagccagttt tccgcctgaa tcgccgcacg taacgtcgta
     5761 aattcctgca tgttttggtg cagaatctgc cagaatcggt gtatccgtcc ctgtgagtcg
     5821 ccgccgaagc gagcgccatg ctccggcgca tccggcatga ctacccggaa tcctgcctgt
     5881 gccagggcaa cggcaaaata actataaacc aggctggagg aggtgaagcc atgatagaac
     5941 accacacagg gaagcggcac ggcgcgtttc ccttccggga aggcatgtag tacgacgcct
     6001 ccggctaatt gtcgtgtttc aatcgctatc attattctct cctttttatc cggtatgcca
     6061 cggagaaata cttaacgcaa gtttatggat agcgcaataa ttcataatgt ttgagaactg
     6121 ggttacgctt tcgcaacgtt ttcattcgaa aatcgcgtga caggtaacac ttcgggaaca
     6181 ttccccctaa agggaaatca ataaggcatt acactatgat tatcaggaaa cgagatagag
     6241 ttatgcgtcg gtttgctcca ttgatagcag cgctgttatt aagcgcgtgt agcatgctgc
     6301 agggtacgcc gcaacctgcg ccgcctgtcg ccgatcaccc gcaggaaatc cgtcgcgatc
     6361 aaacgcaagg actacagcgg atggggaccg taagcgcgct ggttcggggt tccccggatg
     6421 atgcaataga tgaaatcaga gcgaaagccg ccgctgcgaa agccgattat tacgttatct
     6481 taatggttga tgaaacggtt gtaaccggac agtggtattc acaagccatt ttatatcgtc
     6541 aataacagta gattgatttt tagtcagttt tacattgctt tgcgccccta tgcgtttacc
     6601 tgtgcacaat aaacaaacag gtttaccgtg atggagcgtc ctgttaaatg cggggtatgt
     6661 aataaggagc tgacgatgaa acaagaactt gccttatcct cactgctgct ttctgccgga
     6721 ctggtgagta cgacggcaca gtctgccgaa ttcgccagtg ctgactgcgt aacgggtctg
     6781 aatgaaatcg gcctgatctc ggtcagtaat gttgcaggaa acccacagga tgtggagcgg
     6841 attatcgccc tcaaagccga tgaacagggt gcgtcctggt acagaattat tcaaatgtat
     6901 gaagaacaac agtcgaataa ctggcgcgta caggcgatac tctatgcctg atgccgcgtg
     6961 gctcgcgccg gatggcatgt actacaggcc aaacgttacc gcagtccccc ggtcgccctt
     7021 aacagtaaat cattttgcac ctgggcaggc agcggcattt cgccgcgtgt atccagcatc
     7081 atctgacacc acgcttgcgc cagcggcggc gaggcatgac gcagcatttc cgctccgcac
     7141 cccagcaaga aaagctgctg cgtaatctct ctgcccattg cttcgtccgg tttgcgtaaa
     7201 cgttgctgta gctggcgtac cgcgcggtcg taatggcgat cctgaccttt gacttccgca
     7261 aaagcttcac tcaatacgtc atagacgccg tgttgttttg tcagcacccg aagtacatcc
     7321 agacacatga tattgccgga accttcccag atactgttca ccggcatttc acggtacagg
     7381 cgcgggagtt cgctctcttc gcaatacccc atcccgccga gaacctccat cgcctcagcc
     7441 acaaaaggga ttccctgctt acagatggcg aatttcgccg ctggcgtgaa taatcgcgcc
     7501 cataatgcct ctttcgcctc gcgacgttgc tcccaggcgc gcgccagccg aaacaaaagc
     7561 gccgtctgcc cctccaggca tagcgccata cgacttaagg tttgtcgcat caacggttgt
     7621 tcgatcagcg gcttaccaaa agcctgacgc tgatgagcat ggtaaatggc gactgaaaat
     7681 gcgcgccgca ttaagccatg actcccgagc gcgcaatcaa gacgcgtcat accgcccatc
     7741 tttaagatat gccgaatccc ttcgccctct tctcccagcc gccagccgac ggtatcctga
     7801 aactcgacct cggcgctggc attagatcga ttaccgagtt tatctttcag gcgctcaaga
     7861 cgaacagagt tccgttgccc gtctggcagg aaacgcggca caaagaaaca ggatagtcct
     7921 ccttttgcct gcgccagcac gaggtgcgca tcactttgcg gcacagagaa aaaccattta
     7981 tgtcccacca gccgatatga atcatccgcc agccgctccg cgtgggtcgt attactgagt
     8041 acgtcagatc cgccctgctt ttccgtcatt cccatgccga tgagcaggcc ccgtttttgc
     8101 ccgcccggca gcaaatgcga atcgtagcga tcgctgcgca gcggcgccag ccagtcatgg
     8161 aaagtggcgg gaagcatctg caatagcaac ggcgtcgcgg caaaggtcat cgtgacagga
     8221 cagagtgttc ccgcttctac ctgagcatgt aatacaaaac gcgccgcccg ggcgacaaaa
     8281 cttcccgccc ttgcctcttc ctcccaggcc aggtaatgta ccctattagc gcaaagcccc
     8341 tgcatcaaca ggtgccaggc gggatgaaag cgaacgtcat ccaggcgctg tccctgggga
     8401 tcgtaacgca gcaactcagg aggatgcgcg ttcgccagac gccccagttc cagtgattcc
     8461 gccgttccca gttgttggcc aatgctggcg agaagatcgc tatcccatcc cgcgccttcc
     8521 cgggaaaccg cttcacacag cgcgccatca gacaggaata agttactgtt attgagcgga
     8581 gcaggttgat taaagacggt atgtgtttgc caggacatgg tgtctccctc cttcaatggc
     8641 gctgaagtca agtatggtca tgactgcgcc attgacgccg gagcaagatc acaaaagtat
     8701 gattaaccgg caatataatg tgggacgaaa cgggaagtgt ctttggtaat tagcgtattg
     8761 tcctcgcgaa tccccattcc ggaggcttca tcgtcaatga tccaactgcc aatcagcgta
     8821 tagctatcgc caaagcgcgg caaaggctga aacgcctggt aaatcatcgg ctcgtcagcg
     8881 tagtcgccat cggcatgatc gataacattt tgccgctcgt caaaaatcgt gacgttgccg
     8941 ccttcacgtg aataaatcgg cttccgtacg ctactttcac ctggcgctgc gagcgatttt
     9001 tcgccctcaa accaggccgg cagaagattc ggatggccag ggaaaaagcg ccacaataac
     9061 ggcaacagcc ctttgttact cagaatactt ttccacaatg gctcaatcca ttgctcacga
     9121 cgttttcgca atagcgggcc gttgtcatcg cgcatcatcc attccagcgg gtagagctta
     9181 aaggcgcggc gaatcacgtt atcgtccaga tcggtcagca cgccgcctac gccaagcccc
     9241 agttcttcaa tatagataaa tcgcgtttcc tggcccgcct gctgcgcgca atcctgaagg
     9301 tacagcaccg tcgtacgatc ttcgtcggta tcttcacaac agcaaaagta gagcggttcc
     9361 cgactgtaca gctcgctgaa gcgggcgatc agccgctcct gtatcgcgtt gtattgatcg
     9421 gcatcacgcg ggatggcgcc gctacgacga gcatcctcca gccatagcca ttgaaagtag
     9481 gaggactcat agagcgatgt cggcgtatcc gcgttgtatt ccagcaattt aaccggatct
     9541 ttgccgcacc agacgaaatc catccgcccg taaagcgaag gatcgcggct gcgccaactt
     9601 tcggcgatga catcccagta caatggcggg atcgccagct gctgcatgat ctgctcatcc
     9661 cggacggccc gctcgacaac ctccagacac atctgatgaa gctctgcggt cggtttttcg
     9721 atctgttctt caatttgccg taatgtaaaa cggtaggccc ggctttcatc ccagtaaatt
     9781 tcgttatcga taacatgaaa gtcaaaaccg tgatcgcatg cgatcttatc cagatcccgg
     9841 cgtaccggta cgttatgtcg tagcatggtt agcctcccca gtgcccgcgg gcgctggaag
     9901 aacggccata gccgccgcgg gagacggtgg acgctttccg tatgatataa ccagggctgg
     9961 tcacggtatc gcttttccct gtgccgctgc gccacgcata atcgccggat gtggtgcgcc
    10021 agacgggacg ggagacgtaa gatgaaccgc cgctgctata gatgtattgt tcatcacggt
    10081 tctgacgaat cgcgcggctg agtaaaaagc cgcttaatac cggaacccag ctccgctcgg
    10141 tgatatcaaa gtagcaatcg ccaaactgcg actgacagct ctcctgcgtc aattgcttag
    10201 gcacattagc gtaaaattct gttttcgcat tattccagcc gtcagcgcaa acgctggcgc
    10261 tattgccatc gtcaatacag tcgttcaccg tggcgtaaaa cgtcccatcg ccgtcgttgt
    10321 cactattgct gccgtcaccg taccctttca ggagaaaaaa ggccgctcca cccataatcg
    10381 ccagcgtcag gtattttggc gtgtagcgat ttcgttgccg ctcaaaggga ttgaccggtt
    10441 cggctatccg tcttattgcc gaatggccta cgccggatgt gcttctggat tttcgttttt
    10501 ttgccatgat cttccgttac catgtcatac aggcagcgtt aaaaataccg ccagccagcg
    10561 ctgcggttcc cataaatagc cccgccgcca cgttgtgatg aataattttt tcgctcagcg
    10621 taggcatgta taaccttacg caaccataaa tcagcagctg aatcaccagc gcaatgccgc
    10681 cccaggcaaa atagtccggg atgctgactg agtttatcgc cgcgctggat aaggggatga
    10741 catagcccag caacgtacca ctaaaggcca gcgatgccgc agtattgtta ttttttatca
    10801 actgccattc attatgcggc gttatctttg agtaaataaa aagaaataca atgatcattg
    10861 ccgcgccaat aaaaaaatag gcgcagaaag ccagtaatgc gtccagtata tgcataattt
    10921 ccctgtatgt gcttaaccaa taaccgttag tgaagtgaga gggatatcca cgccgagggc
    10981 gcgtgaaaac acccattcag gctcaccgcg ctcgttaaat gattcttccc cgttcaatag
    11041 aagatactcc caggcgtcgt ccgtcacctg gcgctggaaa cccatcgtaa aattgtgaac
    11101 gtcccatttc tctgcctgct gattttcaac cttttccagc atgtagacag gttcaatatt
    11161 gcccggctct tcatggttaa aaaagcgctg ccagcgccgt tcttgccagt tgagcgtcat
    11221 cggccctatt gccgctggcg caatggctga acgccagtga cgttcctcgt taataccgaa
    11281 actttcctca tatacaaaaa gtttgatgtc atcaatgtcg tcaacatccg tgccgccagt
    11341 ggtgttaatt tgtagaaact catcgccaga ggtgtagtag cgaaaaatct gactgccgcc
    11401 gcctaaatct atgcgactcg ctgccgcgac agtgtatttt tcacctggta gcgccaccag
    11461 caacgacgac tctagtagcc ggaatgccag cgtatccagc gtgaaaccgg cgttaagatg
    11521 taatcctaat ggtccgcgaa tcggcgctgg cgtgcttgtt ttaccgagca aacgctgaaa
    11581 aaattgcatc ataggggaac ctctatctct tgccatgcga cctcttcaga cagaatgcga
    11641 ttgtcgttgg gcataatgtc atttgagatc gcgcattcat gtgccgtctc gtatgaaagc
    11701 gacgaagctc agcacggtag cgcgctttcg cgctacagat agcaaagcag atactgcccg
    11761 ataaacaggc ccagcaaagc gggccaggtc agtctggaca aatgacgctg gcaggttttg
    11821 accatccacg taaagagcat tattcgcctt gttgacgctg taaacgcgcc aacacatcct
    11881 gagcattgct tttattggtt gcgccaatac ccgcctgcgc cagtttttcg tccaggtcgc
    11941 gtccatcggc gactttttcc agctgcgcgg cggcatccag ccgtgcctag cgttcagcct
    12001 gacgcgtttg taaacgttta agcggctccg ccgccgtaga cacattcgac gcggctccga
    12061 cggtcgaagt cgtcaccgcc tgctgcgcgc gctgcatggc ttctgtcgcc ttaaccactt
    12121 caagttgctg ctcaaactgc gcaatccgct ggcctgtcgc cgttacggcc ttctccaccg
    12181 catcacgaga ggcttccaga ttagtcagca cctgttcttc ggcaagaatg gcattttcca
    12241 gacgggctat ttcttccgcc acttcgttga gtaaagcggc gtcgacattc ttactcattg
    12301 ccgccaacgc ccgcgtttca aggctgactt tacgcgcacg taaatcattc agcttgtcat
    12361 ggcttagctt cacccgcgcc aataaatcca ctctggattt acccgcttta tccagctcgg
    12421 cttttgcgtc gcgaatatgc tgctccagca tacgtacacc ctgtgcttca tcaatggctt
    12481 cttctgcctg agcaacgaat gatttaccta acgtgaacaa actttttaaa attcccatgt
    12541 aagccgcctg tattattcct gtgaatagac ttgtgttatt tcagcgatat ccaacgcatt
    12601 ttctacaagc gtggtgattt ccagcgtcac gtcggcaagc gacgaattta acgacaacgc
    12661 gccaaaagcg acataatatt cctcctgttt taccagggca ataccgaccg aagacagcgg
    12721 taaaaccttc tgatttctca gcaagaaaag attaaattcc gcggtatctc taatcgtatt
    12781 taccggacag atataagtct cgataactat ttgttgcgag gtaaataaaa ccgtcagtgg
    12841 taaatcgcca taatcattca tttttattat taatgaagat tcattatttt ctatatcaat
    12901 atctaattcg gcgatgttgt ttaacgcatc cgccagcgtc cgtggagtcc atgccatatt
    12961 attatctcta tctctttttt ataaataaag ggagttacag ggtaggtttt gctttttata
    13021 ttaccagcca aagataaaaa aaaaccatcc gattatggat ggttttttct taaaaaatac
    13081 tattagcgtc aggtacgctg gcgaacggct tcaaacagac aaatcccggt cgccacagag
    13141 acattcagcg atgacacgct accggccata ggaatgctga tcagctcatc gcagtgctca
    13201 cgggtcagac gacgcatacc ttcaccttct gcgcccatga ccagcgccat gcggccaggc
    13261 attttgctct gatacagcgt atggtcagcc tcgcccgccg ttccgacaat ccagatattc
    13321 tcttcctgca acatgcgcat cgtgcgcgcc aggttggtga cgcggatcaa cggcacgctt
    13381 tccgctgcgc cgcaggcgac tttcttcgcc gtcgcgttaa gttgcgcgga gcggtctttc
    13441 ggcacgatta ccgcatgtac gcctgcagca tcggcgctgc gcagacaggc gccaagatta
    13501 tgcggatcgg tgacgccatc gaggatcaac aaaaaggggc gatcgtgtaa tgcgatcaga
    13561 tccggtagat cgttttcctg atactgccgg cctggtttca cacgagcgat aatgccctga
    13621 tgcacggcac cgtcgctttt ctcgtcgaga tattggcggt ttgccagctg gataaccacg
    13681 ccctgggact caagggcgtg aatcagcggc aacagacgtt tatcttcacg gccttttaaa
    13741 ataaaggctt cctgaaaacg ttcaggggcg cgctccagca gggcctgcac tgcgtggatg
    13801 ccgtaaatca tttcgctcat taatgtactc gttgtttacg ttttgccggg ggcgctacgc
    13861 ttgcccggcc tacagataat tgaccctctt ctgtttgaag agggtattgc tcactctgcc
    13921 gcttttttct tcgccgcacg cttcgctttg gtcgctgcgg ctattttctg cgttttagcc
    13981 gatggctttt ttgcttttct cgcgtctttc ttcgctgctt tcggcttcgc ttttttctcg
    14041 ccgcggaagg cgctatcagg ctcgaagtta acctttttac ctacctgacg acgtttaccg
    14101 gcgtttttac tttcaccttt tttcgctttt tcacgcgccg ttttgccgac gttacgcggt
    14161 gcgcgctcgc tggaaatcaa gctaaagtca attttccgtt cgtccatatt caccgcttcg
    14221 acgcgtacct cgacccggtc gcccaggcga tatgtctgcc cgccggattc gccaatcaga
    14281 cgttgcccta cctgatcgaa gcgatagtaa tcgttatcca gtgaggaaac gtgtaccagc
    14341 ccatcgataa acagttcatc aagacggaca aagaagccga aaccggtgac gctggcaatc
    14401 acgcccttaa agacgttgcc tacctgatcc agcataaagt cacatttcag ccagtcggag
    14461 acatcacgcg tcgcttcatc agcgcggcgt tccgccatcg aacagtgctg gccgagctgc
    14521 aacatctctt ccatcgagta gtgataaccg cccgtttctg tggtgttgcc cttgttccct
    14581 tgctctttag ccagcaggta cttaatggcg cggtgcaaag aaagatccgg atagcggcga
    14641 atcggcgagg taaagtgcgc ataagactgc aacgccaggc caaagtgccc gcggttttcc
    14701 ggatcgtaaa tcgcctgctt cattgaacgc agcagcatag tttgcagcat ttcggcgtcc
    14761 ggcctgtcgg caatcgattc aagcagttcg gcataatcgc gcggttccgg tttatttccg
    14821 cccggcagct ccaaccccag ctccgccagt acggagcgga atgaggtgat cgcttcggtg
    14881 gtgggcttat catgaatacg gaataacgcc ggctctttag ctttttcgac aaagcgcgcc
    14941 gccgagatat tcgccatgat catgcactct tcgataagct tatgcgcgtc attacgctgg
    15001 gtctgttcga tacgctcaat gcgacgctcg gcgttaaaga taaacttcgc ctcttcgctc
    15061 tcaaacgaga tccccccgcg ttcttcacgc gctttatcca gcactttgta gaggttgtgc
    15121 agctcttcaa tatgcttcac cagcggcgca tattgttcac gcagatcctg atcgccctgc
    15181 agcatatgcc agactttggt ataggtcaga cgcgcatggg agctcatcac cgcttcatag
    15241 aatttgtagc cggtcagccg acctttcgcc gagatggtca tttcacagac catacacagc
    15301 ctgtcaacct gcgggtttag cgaacacagg ccgttggaga gcacctccgg caacattggg
    15361 acaacctgtg acgggaagta aaccgacgtg ccgcgattgc gcgcctcgcg atccaacggc
    15421 gttggcggcc gtacataata gctcacgtca gcaatagcga cccacaaacg ccagccgccg
    15481 ccgcgttttt tctcacagta aaccgcgtcg tcaaagtcac gggcatcttc gccatcaatc
    15541 gtgaccagcg gcaaatcgcg cagatcgaca cgaccgactt tcgcctcttc cggcacctct
    15601 tctttcagcc cggcgacctg ctgctctacc gcctgcggcc agatgtaggg tatttcatgg
    15661 gtacgcagcg ccatatcaac cgccataccg gtacccatat tgtcgcccag cacttcgacg
    15721 attttcccta ccgctttagt acggcgagtt ggacgttggg tcagttcaac cacgaccacg
    15781 aaccccatcc gcgcgcccat gacgtcttct ggcgggataa gaatgtcgaa gctgagacgg
    15841 ctgtcgtccg gcaccacaaa gccgacgccc gcatcggtga aataacgccc gactatctga
    15901 ctggttttcg gtaccagtac acggacgata cgcgcttcgc ggcgaccttt acgatcggcg
    15961 cccagcggct gcgccagcac ctgatcgcca tgaatacagg ttttcatctg ctcgctggaa
    16021 agatacagat cgtctttgcg gccttcgaca cgtaagaaac cgtaaccatc acgatgaccg
    16081 atcacggtgc ctttcagcag gtcgaggcgt tccggcagcg catagcactg gcggcgggta
    16141 aagaccagtt gtccatcgcg ctccatcgcg cgcaggcggc gacgcaaggc ttcaagctgc
    16201 tcttcgcctt caatattcag ttctacggcc agttcttcgc gactggccgg tttttcacgt
    16261 ttcgttaaat gttcgaggat aaattcccgg ctcgggatag gattcgcgta tttttctgct
    16321 tcgcgttcct ggaaaggatc ttgtgacatt gaggttcctc cattgtcatc tctaatgaag
    16381 tttacttcac tccaccagta ataatttata aagcggttga ttctcttcaa ccaaatcggc
    16441 aagcgtgtag ttatccagct ccttgagaaa actctgcacg gccttagaaa gcgcctgttt
    16501 cagacgacag gcaggggtga tgtggcaaaa ttcgctgcta cagttgacca gtgataaggg
    16561 ttccagctca cgcaccacat cgccaataca aatagtatta gccggtttac ccaggcggat
    16621 accgccattt tttccccgaa cggcggtgac aaagcccgcc cggctaagct gattgataat
    16681 tttgaccata tgattacggg acacgtcgta gacttctgtc acctcagaaa tgctggtcat
    16741 tcgtccatct ggtaacgacg ccatatagat tagcgcacgt aagccgtaat cggtgaaact
    16801 cgttaactgc acatcaacct caggaaaagg gaaaacggga tataacttat ctgtattgat
    16861 gataaaccag ccacctgtca ggctgctaat ttatttcggt tcaggaagga aaaaagcggg
    16921 gaacaatgac gcatttgagc cgaaggatga tgcaaagcat cttatccggc caacaaatgc
    16981 gtactcatca tagacccggt aagcgtagcg ttaccgggca tcatccatca attacgcgtc
    17041 gaacggatcg cgcagaatca tcgtctcagt acgatcgggg ccggtagaaa taatatcaat
    17101 cggcacgccg gtcagttctt cgatacgttt gatgtagttc agcgccgcct gcggcaggcc
    17161 gctacgatct ttcacgccga aggtggattc agaccagccc ggcatggttt cgtaaatcgg
    17221 ctctacacct ttccagtcgt cagctgccag cggagtggta gtcacttcgc gaccatccgg
    17281 catacggtaa gccacgcaga gtttcacctc tttcaggcca tccagcacgt ccagtttggt
    17341 caggcagaag ccagacaggg agttcagctg taccgcacga cgaacggcaa cggtgtccag
    17401 ccagccggta cgacgacgac ggccggtagt ggcgccgtat tcgttaccct gcttgcagag
    17461 gaactcgccg gtttcatcaa acagttcggt cgggaacgga cctgcaccta cacgagtgga
    17521 gtaagctttg aggataccca gaacgtaatc aacataacgc gggcccaggc cggaaccggt
    17581 cgccacgcca cccgcagtgg tgttagaaga agttacgtac ggataagtac cgtggtcgat
    17641 atccagcagg gtaccctgcg caccttcaaa catgacgaaa tcgccacgct gacgcgcctg
    17701 gtcgagcagg tctgaaacgt caacaaccat agaagtcagg atgtcggcaa cagccatcgt
    17761 atcatccaga actttctggt aatcaaccgc ttcagctttg tagtagttaa ccaactggaa
    17821 gttgtgatat tccatcactt ctttcagttt ttcagcaaag gtttctttgt cgaaaaggtc
    17881 accaacacgc agaccgcgac gtgccacttt atcttcataa gcaggcccga ttccacgacc
    17941 ggtggtgccg atcgctttcg cgccacgcgc tttctcacgc gcgttatcca gcgcaacgtg
    18001 ataatcaagg atcagcggac aggcttcaga cagcagcaga cgctcacgaa cggggatgcc
    18061 acggtcttcc agttctttca tctctttcat cagcgcgctc ggagacagca caacaccgtt
    18121 accgatgatg ctggttacat tctcgcgaag aatacctgat ggaataagat ggagaacggt
    18181 tttttcaccg ttgattacga gagtatggcc tgcgttgtga ccgccctggt agcgtacaac
    18241 atatttagcc cgttcagtca gaagatcgac gatctttcct ttaccttcgt caccccattg
    18301 ggtgcccagt acgacgacgt tgttacccat ttttcaaaat caccgtttgc ttaaaaatgg
    18361 attctaccat cgctttttca gatatacagc actttttgca ctcaatctgc ggcaaatccg
    18421 accacttttt gctcagccaa tcgttttcct caacatgtag tagaccacaa ctcccgcgac
    18481 cacaagtccg ccgccaaaac gacgtaaaac attttccggc agttgcgcca gtgccgaaac
    18541 catttttttc catgcgccgg gatacagcat cggtcccagc ccttcgagga ctaataccag
    18601 agcaagcgcc aaccagattg ttgaattcat ttatcgccct tataaaagaa aaccaccggc
    18661 atcctttgga tgcggtggtt ttgctggtct aaaaccgctg acgctatttt agcgtgtcgt
    18721 cgaactcggt gtcttcatgt agcggaagaa atcgctgtcc gggctcagta ccatcacgtc
    18781 ctgattacct tcgaagctct tctcgtaagc gcgcagacta cgaatgaacg cgtagaaatc
    18841 agggtcctgg ctgaacgcgt cggcaaacag cttcgcggct tcagcatcac cttcaccacg
    18901 catgatacgc ccctgacgct cggcttccgc cagagttttc gtcacctcat agtcagcagc
    18961 cgcacgcagt ttttccgctt cttcctgacc ttgtgagcga tgacgacgcg cgaccgcttc
    19021 acgctcggcg cgcatacggt tgtaaatcgc ctcagaaacc tcggtcggca ggttgatctg
    19081 cttaatacgc acatcgacca cttcgatacc caacgccgcc atactgttcg ggttgatgac
    19141 cggtacttta cctttggttt ccgccgtgac gcgttccgcc gcttcggcaa tcgcgtcatc
    19201 cgccgccggg gtcgccactt catcatcagt gccggctgaa ccggagttca gcgcgtcgcg
    19261 cacttccaga gtcagacgac cacgagaatc ggtcacgatg tcttttacgt ccaggcgacc
    19321 aatctcagaa cgcaaacggt ccgagaactt acgttttaac agcacttcgg cttgcgaaat
    19381 atcgccgccg ccggtcgcca gatagtaacg gctaaagtcg ctgatacgcc atttgatgta
    19441 ggagtcgaca atcaggtctt tcttctcttt agtcacaaag cgatcggcct ggttatccat
    19501 cgtctggata cgcgcatcaa gcattttcac tgattcaata aacgggatct taaagtgcag
    19561 acccggcgcg taaaccagcg gtttgttctc atcgtcacgc agaactttac caaaacgcag
    19621 cgtaatgccg cgctcgccct ctttgaccac aaagacggac atgtagagca ctaccagcac
    19681 gatgatgata atcgcaataa ctgacttacg catcgttatt ccccctgacg ctggtagtcg
    19741 ttacgctgcg cattcgcgcg gcgttggtcc ataatatcgc cctgatttga ggacgacgtg
    19801 ttgcttgctc cgctggcgtt agactttgtg gacggcggca ggcgcagcag gttgctggcg
    19861 ctattgtcgc tctttgccgc cggcgcattc ccgcctttca gcatctgatc taacggcagc
    19921 accattaaat taccgctctt gtcgttaacc agtactttac gggtatggct cagcactttt
    19981 tccatcgttt caatatacag acgctcgcgc gtaatctgcg gcgcggcttt atattctggc
    20041 aaaatcttcg caaaccgggc gacttcaccc tgcgcttcca ggatagtctg ggttttatag
    20101 gcacgtgcct cttccagaat acgctgcgcc tgaccgttgg cgcgcggctg aacttcgttg
    20161 gtatacgctt ccgcttcacg aatgtactgc tgctcgtttt cacgtgcggc aatcgcgtcg
    20221 tcaaaggcgg ctttcatctc ttccggcgga cgcgcagcct ggaagttcac gtccagcagg
    20281 gtaatcccca tgttgtacgg tttgatagtc tcttccagct cgcgttgggt atcgctacga
    20341 ataacggtac gaccttcggt cagaatgcga tccatcgtgt atttaccaat gacgccacgc
    20401 aacgcgctgt cggtggcctg acgcaggcta tcgtccgggc tggtcacgct aaacagatat
    20461 ttctgcggat cggtgacgcg gtattgcacg ttcatttcaa cgcgcacgac gttttcatca
    20521 gacgtcagca tcacgcctga cgccgccagt tcgcgcaccg cttcgacgtt caccggcgtg
    20581 acgtcgtcaa taaatgtcgg cttccagttc agacctggct ctaccagatg gctgaattta
    20641 ccaaaacgcg tcacaacgcc gcgctcggct tctttaatgg tataaaaacc gctggccgcc
    20701 cagataatga ctactgccgc cgcggcgatg gcgacaatac ggcctcccag ttgcggacgc
    20761 gggccttgcg atgagctacc gccgccggaa ccggtgcctt taccgccccc aaaaccaccg
    20821 agttttttac tcagcttacg gaagatatca tccagatcgg gaggtccctg atcgcggcca
    20881 cctttgtttc catttccccc agagttgctg ccaggtttgc tgcttcccca cgggtcgcgg
    20941 tcctgtccgt tattaccggg ctgattccac gccatgtttg tgctccatat ttgttatgcg
    21001 gtgatccccg ttgtctttcg acctcagagg ataaggcgaa attactccat gcttcagacg
    21061 aaccgccgtt acagacatca tctttcaggc tacgccttga gtggcggctt ttttacccca
    21121 ggtcacttcg ttgtgagctc ctgaaattct ctcagctacc gcttcaatac gacctgaatg
    21181 acttcgcgtc tagatcacgt attcgatcaa cgctggttct tgtttacaga ggcgacgcca
    21241 gtcgacaatc ggcattcgta cctgcagact gacgctaccg tcttcctcca tccactcttt
    21301 ttctattgcc tgaagctgat aaaaccggct tctcagacgc ccttcctgcg gcagcaaacg
    21361 cagcgtatgc tgcgccacct cgccggaaag acgctccgtc aaagcctgaa aaagctgtgg
    21421 tattcccacg ccgctttgcg ctgaaagcca aacgcggatg ggtttattct cttcatctct
    21481 gtcgatacgc ggttcaaagt cgtccagcat atcgattttg ttcatcacca ttaaggtggg
    21541 gatttcgtga gcgtcaatct cttcaagaac ggtgtttacc gcctcgatgt tttcctgcac
    21601 acgaacatcc gccgcatcga ccacatgcag cagcagcgtc gcctgacgcg tctcctgcag
    21661 ggtagcttta aaggcagcca ccagatcgta cggtaaatgg cggataaagc ctaccgtatc
    21721 cgccagaacg gtttcaccga catccgctac atcaatacga cgtaacgtgg ggtccagcgt
    21781 cgcaaatagc tgatctgccg catagacccg cgcttcagtg atctgattaa aaagggtgga
    21841 ttttccggcg ttggtatagc ccaccagcga taccgtcgga acgtcggcct tgatgcgcga
    21901 ctgccgcccc tgctcacgtt gcttctcaac tttctccagg cgcgactgaa tctgcacaat
    21961 gcgattacgc agtaaacgac ggtcggtttc gagctgggtt tcacccggac cgcgcaaacc
    22021 aatcccgcct ttctgacgtt caaggtgggt ccagccacgc accagacgcg tagccagatg
    22081 gcgtagctgc gccagctcaa cctgcaactt accttcatgg gtacgcgcac gttgggcaaa
    22141 aatatctaag ataagaccgg tgcgatcgat aacccggcac tcgcacaaac gctccaggtt
    22201 tcgctcctgg gctggactca atgcatgatc aaacaatacg accgctgcgc cagtcgcttt
    22261 cacggcttcc gcaatttcaa ctgccttacc ttcacctaca aagtacttcg ggtgcggtgc
    22321 tttacggcta ccggtaatca cctgcattgc ttcgacaccg gcggaagaga ccagagattc
    22381 aaactcctgg aggtcttcca tatctttgtc ttgcgaaaaa tagatgtgta ccagtaccgc
    22441 ctgctcaccg gcatcataac ggtcaaacaa gcgtaaaccc tcttaataac cagcgggggc
    22501 gattatccga cgcccccgac atggataaac agcgcgtgaa cttattcagt ctcttcgctg
    22561 tcctgttgcg cagtagaacc ctgcgcgttg ctaccgtgat ggtagttatt gctggcgccg
    22621 ccaccggcat tgttgctgtg atgggaaacc gggcgagacg ggacaacagt agaaatcgcg
    22681 tgcttataaa ccatctggct gaccgtgttt ttcaacagga tcacgaactg atcaaaggac
    22741 tcgatttgac cttgcagctt aataccattc accaaataaa tagaaactgg aacacgttcc
    22801 cgacgcaatg cgttcaggaa cggatcttgt aaagattgcc ccttagccat tctcttttcc
    22861 ttatatgctt atttgtactt tgaacctttc gattctgaaa aattgcgcac gatacgtctc
    22921 aattgtacac attcagtctg cgatagcacc aacaacctgt aatacttctt ttcgcgcccg
    22981 atcgggattc tcactgtcaa gccagcgcac cccttcccaa ccgcgcaacc aggtcatctg
    23041 gcgcttcgcc aactgtctcg tggagcaaac acctctataa accatttcat catatgagat
    23101 ttcgccctca atgtatgacc acatctggcg gtatcccaca caacggatgg aaggcaagtc
    23161 cgtatgcaaa tctcctcggg caaaaagcgc ccggacttct gcttcaaaac ctgaagccaa
    23221 catctgatga aaacgcagtt caatgcgctg atggagcagt tcacggctcg ctggggcgat
    23281 agcgaactga tgcacctggt acggtagcgc gtctcctgac gtttgcgtta gctccgttaa
    23341 agttttaccc gaaatgaaaa aaacttccag tgcccgggaa agtctttgcg gatcatttgg
    23401 atgaattcgc gcggcggcaa ccggatctat ctcctgaagt tgctgatgca acgcctccca
    23461 tccaagctcc gctgcttgct gctctatccg ggatctgact tccggatctg ctgaaggcag
    23521 cggcgataac ccttccagca atgccttaaa atacagcatg gtaccgccca ctaacagcgg
    23581 gatacgcccc gcagcggtga tctccgccat ttgcgctaac gcgtcgcggc gaaaatccgc
    23641 cgccgaatac gcctgcgacg ggtcgcgtat atccagcagt cgatgcggcg ccgctttcag
    23701 ctcatcggca ttcggcttag ccgtgccaat atccattccc cgataaatga gggcggaatc
    23761 aacgcttatc aactctactg gcaaaacttt acgcagttct atcgccagcg ccgttttgcc
    23821 ggaggccgtc ggccccatca aaaatatcgc cttaggcagg ctcaccttgc ttacatcatt
    23881 catgcttcag ggcgttcatc gccgaatgta aatcaacagg ttgtaacagg ccacccggcg
    23941 gcgcttttac cagctgcgga catagccgct caacatccgc cagcagcgat atggcctgcg
    24001 ccatcgacca ctgcggatgt tcgctctgca cattacgcgc tatccattgt gcaatattga
    24061 ccgttgcaaa tgtggtctgt tgcgccaggt agcctatcag ttcaggaatc aagatttgta
    24121 aattttgttg tcgtaagggt aaaggcaccg cccgaatggt cacatgctgc gcatctgact
    24181 gaaattcaat acccaattct cccaacaaag attgggcttt ttgcagcgcg gctttttcat
    24241 cggcgctcac ttttaaacgc agcggaatca gcaacggctg cgcgcaaacc ggactttgac
    24301 ccggtgtaag ctgcgcctga cgcagccaac gctccgcaac cggcagcgac aagagctgga
    24361 tagtccccgc gtgttccagc aacgcgcagt caccgccgac tatcgtcagt acgc
//
LOCUS       DAGWFR010000053        23769 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.054, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000053 DAGWFR010000000
VERSION     DAGWFR010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 23769)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23769)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23769
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.054"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..1142)
                     /gene="rhlE"
                     /locus_tag="MOX77_002136"
     CDS             complement(<1..1142)
                     /gene="rhlE"
                     /locus_tag="MOX77_002136"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase RhlE"
                     /protein_id="HCA3357665.1"
                     /translation="MSFDSLGLNPDILRAIAEQGYREPTPIQQQAIPAVLEGRDLMAS
                     AQTGTGKTAGFTLPLLQHLITHQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL
                     NIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQIEILVLDEADR
                     MLDMGFIHDIRRVLAKLPAKRQNLLFSATFSDDIKALAEKLLRNPLEIEVARRNTASE
                     QVTQHVHFVDKKRKRELLSQMIGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIH
                     GNKSQGARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIG
                     RTGRAAATGEALSLVCVDEHKLLRDIEKLLKKEIPRITTPGYEPDPS"
     gene            1372..2046
                     /gene="cecR"
                     /locus_tag="MOX77_002137"
     CDS             1372..2046
                     /gene="cecR"
                     /locus_tag="MOX77_002137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator CecR"
                     /protein_id="HCA3357666.1"
                     /translation="MNIPTTTTKGEQAKSQLIAAALAQFGEYGLHATTRDIAALAGQN
                     IAAITYYFGSKEDLYLACAQWIADFLGEKFRPHAEKAERLFSQPAPDRDAIRELILLA
                     CKNMIMLLTQEDTVNLSKFISREQLSPTSAYQLVHEQVIDPLHTYLTRLVAAYTGCDA
                     NDTRMILHTHALLGEVLAFRLGKETILLRTGWPQFDEEKAELIYQTVTCHIDLILHGL
                     TQRSLD"
     gene            2046..3041
                     /gene="hlyD"
                     /locus_tag="MOX77_002138"
     CDS             2046..3041
                     /gene="hlyD"
                     /locus_tag="MOX77_002138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="secretion protein HlyD"
                     /protein_id="HCA3357667.1"
                     /translation="MKKPVVIGLVIAAIVAVIAGGTWWYQSRQDDGLTLYGNVDIRTV
                     NISFRVGGRLASLNVDEGDTIKAGQVLGELDHAPYENALMQAKAGVSVAQAQYDLMLA
                     GYRDEEIAQAAAAVRQAQAAYDYAQNFYNRQQGLWKSRTISANDLENARSSRDQAQAT
                     LKSAQDKLSQYRTGNREQDIAQAKASLEQAKAQLAQAQLDLQDTTLIAPANGTLLTRA
                     VEPGSMLNAGSTVLTLSLTRPVWVRAYVDERNLSQTQPGRDILLYTDGRPDKPYHGKI
                     GFVSPTAEFTPKTVETPDLRTDLVYRLRIIVTDADDALRQGMPVTVKFNDEARHE"
     gene            3034..4770
                     /locus_tag="MOX77_002139"
     CDS             3034..4770
                     /locus_tag="MOX77_002139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCA3357668.1"
                     /translation="MSEAVITLNGLTKRFAGMDKPAVAPLDCTIHSGYVTGLVGPDGA
                     GKTTLMRMLAGQLKADGGSASVLGFDPIQNDSELHAVLGYMPQKFGLYEDLTVMENLN
                     LYADLRSVTGEIREKTFARLLEFTALGPFTGRLAGKLSGGMKQKLGLACTLVGEPKVL
                     LLDEPGVGVDPISRRELWQMVHELAGDGMLILWSTSYLDEAEQCRDVLLMNEGELLYQ
                     GEPKALTQTMAGRSFLMSSPQENNRKLLQRALRLPQVSDGMIQGRSVRLILKKEATAA
                     DIRQAEGMPEITLNETAPRFEDAFIDLLGGAGTSESPLGSILHTVEGTAGETVIEAQE
                     LTKKFGDFAATDHVNFVVQRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGKALVLDMD
                     LKVSSGKARQHLGYMAQKFSLYGNLTVEQNLRFFSGVYGLRGRAQNEKIQRMSEAFGL
                     KSIASHPTDALPLGFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLHINSMVE
                     KGVTVMVTTHFMDEAEYCDRIGLVYRGKLIASGTPDDLKAQAADEQQADPTMEQAFIT
                     LINDWDKEHTHE"
     gene            4763..5893
                     /locus_tag="MOX77_002140"
     CDS             4763..5893
                     /locus_tag="MOX77_002140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCA3357669.1"
                     /translation="MSKSLSWRRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFGY
                     GINLDSSKLRVGILLEQQSQEALDFTHAMTGSPYIDATISDNRHELIEKMQAGRIRGL
                     VVIPVDFAQQMARDGDSAPIQVITDGSEPNTANFVQGYVEGIWQIWQQQRAEDRGDTF
                     EPLIDVQTRYWFNPAAISQHFIIPGAVTIIMTVIGAILTSLVVAREWERGTMEALLST
                     EVTRVELLLCKLIPYYFLGMLAMLLCMLVSVFILGVPYRGSLVILFIITSLFLLSTLG
                     MGLLISTITRNQFNAAQVALNAAFLPSIMLSGFIFQIDSMPAVIRAVTYIIPARYFVS
                     TLQSLFLAGNIPVVLGVNVLFLIASAVMFIGLTWLKTKRRLD"
     gene            6009..7115
                     /locus_tag="MOX77_002141"
     CDS             6009..7115
                     /locus_tag="MOX77_002141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCA3357670.1"
                     /translation="MFHRLWTLIRKELQSLLREPQTRAILILPVLIQVILFPFAATLE
                     VTNATIAIYNEDNGKHSVELTQRFARAKAFTHVLLLNSPQEIQPTIDTQKALLLVRFP
                     ADFSRNLDTFQPAPMQLILDGRNSNSAQIAANYLQQIVKEYQQTLMDGKPKPNNSELV
                     VRNWYNPNLDYKWFVVPSLIAMITTIGVMIVTSLSVAREREQGTLDQLLVSPLTTWQI
                     FVGKAVPALIVATFQATIVLAIGIWAYQIPFAGSLALFYFTMVIYGLSLVGFGLLISA
                     LCATQQQAFIGVFVFMMPAILLSGYVSPVENMPVWLQNLTWINPIRHFTDITKQIYLK
                     DASLGIVWGSLWPLLVIAATTGSAAYAMFRRKVM"
     gene            complement(7077..7487)
                     /locus_tag="MOX77_002142"
     CDS             complement(7077..7487)
                     /locus_tag="MOX77_002142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbhQ family protein"
                     /protein_id="HCA3357671.1"
                     /translation="MKWQQRVRVATGLGCWQIMLHLLVVAMLVIGWMSGTLVRVGLGL
                     CVLYGVTVLLMLALQRHHEQRWRDVADVLEELTTTWYFGTALIVLWLLSRVLQNNVLL
                     ALAGLAILAGPAVVSLLAKDKKLHHFASKHRIRR"
     gene            7620..8378
                     /locus_tag="MOX77_002143"
     CDS             7620..8378
                     /locus_tag="MOX77_002143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HCA3357672.1"
                     /translation="MTQHTRNFSFKVLTINTHKGFTAFNKRFILPELRDAVRTVGADI
                     VCLQEVMGAHEVHPLHIENWPDTTHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRY
                     PIEHYENRGVSVGGSEKRGVLYCRITPPMLNRPIHVMCVHLGLRESHRQAQLTMLAGW
                     VNALPESEPVLVAGDFNDWRQKAGPPLNAAGLEEIFTRAHGRPARTFPVSMPLLRLDR
                     IYVKNANASSPGALPLRNWRHLSDHAPLSAEIHL"
     gene            8375..9616
                     /gene="clsB"
                     /locus_tag="MOX77_002144"
     CDS             8375..9616
                     /gene="clsB"
                     /locus_tag="MOX77_002144"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin synthase ClsB"
                     /protein_id="HCA3357673.1"
                     /translation="MKCGWREGNQIQLLENGDQFYPAVFEAIAQAQQKIILETFILFE
                     DEVGKKLHAALLKAAQRGVKAEVLLDGYGSPDLSDAFVGELTSAGVIFRYYDPRPRLL
                     GLRTNIFRRMHRKIVVIDDRIAFVGGINYSAEHMSDYGPQAKQDYAVRVEGPVVADIL
                     QFEVENLPGQSPARRWWKRHHQAEENRHPGEAQALFVWRDNEEHRDDIERHYLKMLTQ
                     AKREVIIANAYFFPGYRLLHAMRKAARRGVSVKLIVQGEPDMPIVKVGARLLYNYLVK
                     GGVQVYEYRRRPLHGKVALMDDHWATVGSSNLDPLSLSLNLEANLIIHDRTFNQTLRD
                     NLQGIIVNDCKQVDESMLPKRTWWNLTKSVLAFHFLRHFPALVGWLPAHTPHLAQVPP
                     PAQPEMETQDRVDPENSGVKP"
     gene            9616..10578
                     /locus_tag="MOX77_002145"
     CDS             9616..10578
                     /locus_tag="MOX77_002145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0104 family protein"
                     /protein_id="HCA3357674.1"
                     /translation="MAKSHPRWRLAKKVLTWLFFIAVVVLLVVYAKKVDWGDVWTVIR
                     DYNRTALLSAVGLVIVSYLLYGCYDLLGRLYCGHKLAKRQVMLVSFVCYAFNLTLSTW
                     VGGIGMRYRLYSRLGLPGSTITRIFSLSITTNWLGYILLGGIIFTFGVVQLPDHWYID
                     EGTLRILGIVLLLIIAVYLWFCAFAKRRHMTIKGQKLVLPSWKFALAQMAISSANWMA
                     MGAIIWLLMGQDVNYFFVLGVLLVSSIAGVIVHIPAGIGVLEAVFLALLAGEHTSQGT
                     IIAALLAYRVLYYFIPLLLALVCYLILESRAKKLRAKNERAMAK"
     gene            complement(10581..10823)
                     /locus_tag="MOX77_002146"
     CDS             complement(10581..10823)
                     /locus_tag="MOX77_002146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000017217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357675.1"
                     /translation="MSGVIIYRYVLLLAIISVTLATFCTLSSVFMGEFNEVLLLLFSW
                     SLLLFSRLQMNTSFFSAYVYFYRIKRVVLESENASA"
     gene            complement(11013..11720)
                     /locus_tag="MOX77_002147"
     CDS             complement(11013..11720)
                     /locus_tag="MOX77_002147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HCA3357676.1"
                     /translation="MGPLAAIRIRQIAFIPATMLSLTYWYTALGLWCTAGIIWLTLYS
                     HFLITHVQPVVVLWISALLLGLGYGAVTCLSRFGTVVATLIYIAIITLTGVSLAYLFS
                     GGATIFVIVGIMFSLNALFIFYLNISSGLFRPLIFMAVSGIIAAIVVNSLVASSTLVW
                     IVSVLTVLVWTLITALEKSTLHGYARMLYHSEFSSLPRCALFGALTLYLGIINAVVTL
                     CRYIILMILEILLSFRP"
     gene            complement(11867..12572)
                     /locus_tag="MOX77_002148"
                     /pseudo
     CDS             complement(11867..12572)
                     /locus_tag="MOX77_002148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459785.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
     gene            complement(12620..13072)
                     /gene="moaE"
                     /locus_tag="MOX77_002149"
     CDS             complement(12620..13072)
                     /gene="moaE"
                     /locus_tag="MOX77_002149"
                     /EC_number="2.8.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin synthase catalytic subunit MoaE"
                     /protein_id="HCA3357677.1"
                     /translation="MHETRIVVGPAPFSVGEEYSWLAARDEDGAVVTFTGKVRNHNLG
                     DSVKALTLEHYPGMTEKALAEIVAKARSRWPLGRVTVIHRVGELWPGDEIVFVGVTSA
                     HRSSAFDAGQFIMDYLKTRAPFWKREATPEGDRWVEARDSDQQLAKRW"
     gene            complement(13074..13319)
                     /gene="moaD"
                     /locus_tag="MOX77_002150"
     CDS             complement(13074..13319)
                     /gene="moaD"
                     /locus_tag="MOX77_002150"
                     /EC_number="2.8.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin synthase sulfur carrier subunit"
                     /protein_id="HCA3357678.1"
                     /translation="MIKVLFFAHVRELTGTDALDLPADFSTVESLRQHLATKSDRWAL
                     ALEDGKLLAAVNQTLVSFDHPLTAGDEVAFFPPVTGG"
     gene            complement(13312..13797)
                     /gene="moaC"
                     /locus_tag="MOX77_002151"
     CDS             complement(13312..13797)
                     /gene="moaC"
                     /locus_tag="MOX77_002151"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HCA3357679.1"
                     /translation="MSQLTHINAAGEAHMVDVSAKAETVREARAEAFVTMRSETLAMI
                     VDGKHHKGDVFATARIAGIQAAKRTWELIPLCHPLLLSKVEIQLQAEPEHNRVRIESL
                     CRLTGKTGVEMEALTAASVAALTIYDMCKAVQKDIVIGPVRLLAKSGGKSGDFKVDAH
                     D"
     gene            complement(13800..14312)
                     /gene="moaB"
                     /locus_tag="MOX77_002152"
     CDS             complement(13800..14312)
                     /gene="moaB"
                     /locus_tag="MOX77_002152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein B"
                     /protein_id="HCA3357680.1"
                     /translation="MSQVSAEFIPTRIAILTVSSRRGEEDDTSGHYLRDSAQEAGHEV
                     VAKAIVKENRYAIRAQVSAWIASDEVQVVLITGGTGLTEGDQAPEALLPLFDREVEGF
                     GEVFRMLSFEEIGTATLQSRAVAGVANNTLIFAMPGSTKACRTAWENIIAPQLDARTR
                     PCNFHPHLKK"
     gene            complement(14334..15323)
                     /gene="moaA"
                     /locus_tag="MOX77_002153"
     CDS             complement(14334..15323)
                     /gene="moaA"
                     /locus_tag="MOX77_002153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HCA3357681.1"
                     /translation="MASQLTDAFARKFYYLRLSITDVCNFRCTYCLPDGYKPGGVTNN
                     GFLTVDEIRRVTRAFASLGTEKVRLTGGEPSLRRDFTDIIAAVGENDAIRQIAVTTNG
                     YRLARDAANWREAGLTGVNVSVDSLDARQFHAITGQDKFRQVMAGIDAAFDAGFEKVK
                     VNTVLMRDVNHHQLDTFLAWIQPRPIQLRFIELMETGEGSDLFRKHHISGQVLRDELI
                     KRGWIHQLRQRSDGPAQVFCHPDYAGEIGLIMPYEKDFCATCNRLRVSSVGKLHLCLF
                     GDGGVSLRDLLQDDAQQYALEERISDALREKKQTHFLHQSNTGITQNLSYIGG"
     regulatory      complement(15311..15455)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01055"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="molybdenum cofactor riboswitch; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="molybdenum cofactor"
                     /db_xref="RFAM:RF01055"
     gene            15720..16628
                     /gene="yvcK"
                     /locus_tag="MOX77_002154"
     CDS             15720..16628
                     /gene="yvcK"
                     /locus_tag="MOX77_002154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine diphosphate-N-acetylglucosamine-binding
                     protein YvcK"
                     /protein_id="HCA3357682.1"
                     /translation="MRNRTLADLDRVVALGGGHGLGRVLSSLSSLGSRLTGIVTTTDN
                     GGSTGRIRRSEGGIAWGDMRNCLNQLITEPSVASAMFEYRFGGNGELSGHNLGNLMLK
                     ALDHLSVRPLEAINLIRNLLKVDAQLIPMSELPVDLMAIDDQGHEIYGEVNIDQLATP
                     PQEIMLTPNVPATREAVQAINDADLILIGPGSFYTSLMPCLLLDELAQALRRTPAPMV
                     YIGNLGRELSLPAASLTLVDKLAMMEQYIGKKVIDTVVVGPRVDVSAVNDRLVIQEVL
                     EASDIPYRHDRQLLHNALEKALQALG"
     gene            complement(16723..18987)
                     /gene="slrP"
                     /locus_tag="MOX77_002155"
                     /pseudo
     CDS             complement(16723..18987)
                     /gene="slrP"
                     /locus_tag="MOX77_002155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459778.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-1 type III secretion system effector E3
                     ubiquitin transferase SlrP"
     gene            complement(18995..19168)
                     /locus_tag="MOX77_002156"
     CDS             complement(18995..19168)
                     /locus_tag="MOX77_002156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_447236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357683.1"
                     /translation="MATDYIILLKKEVMEARAFISQALQILNDLSEIMTTMASCLKLR
                     ISLSVTLGYVQIR"
     gene            complement(19477..21498)
                     /gene="uvrB"
                     /locus_tag="MOX77_002157"
     CDS             complement(19477..21498)
                     /gene="uvrB"
                     /locus_tag="MOX77_002157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit B"
                     /protein_id="HCA3357684.1"
                     /translation="MSKPFKLNSAFKPSGDQPDAIRRLEEGLEDGLAHQTLLGVTGSG
                     KTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYV
                     PSSDTFIEKDASVNEHIEQMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLH
                     LTVGMLIDQRAILRRLAELQYTRNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFD
                     EEVERLSLFDPLTGQVESTVPRYTIYPKTHYVTPRERILQAMEEIKDELADRRKVLLA
                     NNKLLEEQRLSQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGL
                     LVVDESHVTIPQIGGMYRGDRARKETLVEYGFRLPSALDNRPLKFEEFEALAPQTIYV
                     SATPGNYELEKSGDEVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRQRAAINERVL
                     VTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLRE
                     GLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIG
                     ETERRREKQQKYNEEHGITPQGLNKKVVDILALGQNIAKTKAKGKGKGRSTAKAGIVE
                     LDMTPKALQQKIHELEEQMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS"
     gene            complement(22149..22835)
                     /gene="bioD"
                     /locus_tag="MOX77_002158"
     CDS             complement(22149..22835)
                     /gene="bioD"
                     /locus_tag="MOX77_002158"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent dethiobiotin synthetase BioD"
                     /protein_id="HCA3357685.1"
                     /translation="MTKRYFVTGTDTEVGKTVASCALLQAATQLGYQTVGYKPVASGS
                     EMTTDGLRNSDALALQRNSSLPQPYSAINPYTFAEPTSPHIASADEGRAIDAAVLSRG
                     LRTLEAQADWVLTEGAGGWFTPLSATLTFADWVQTEQLPVILVVGVKLGCINHAMLTA
                     LAVEQAGLPLVGWIANDMQPPGARHGEYLATLRRVIPAPLLGEIPWLGVSPSQAATGQ
                     YLDLSPLERA"
     gene            complement(22828..23583)
                     /gene="bioC"
                     /locus_tag="MOX77_002159"
     CDS             complement(22828..23583)
                     /gene="bioC"
                     /locus_tag="MOX77_002159"
                     /EC_number="2.1.1.197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-ACP O-methyltransferase BioC"
                     /protein_id="HCA3357686.1"
                     /translation="MAQVNKQAIAAAFGRAASQYEQHASLQQHSADALLTLLTGRQFA
                     SVLDAGCGPGRMSRYWRERGSEVTALDLSLPMLQQARDRQAAHHYLLADIEAIPHDAE
                     VFDLAWSNLAVQWCGDLRDALSELYRVVRPGGVVAFTTLCQGSLPELRQAWQAVDNRA
                     HANSFLPEEAIDHALRGWRASRHTQAMTLWFEDALSAMRSLKGIGATHLHEGRETDVL
                     TRARLRQIQLAWPQRQGKYLLTYHLFMGVIERD"
     gene            complement(23567..>23769)
                     /locus_tag="MOX77_002160"
     CDS             complement(23567..>23769)
                     /locus_tag="MOX77_002160"
                     /EC_number="2.3.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459773.1"
                     /note="catalyzes the formation of 8-amino-7-oxononanoate
                     from 6-carboxyhexanoyl-CoA and L-alanine; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="8-amino-7-oxononanoate synthase"
                     /protein_id="HCA3357687.1"
                     /translation="IQPLIVGDNSRALRLAEALRQQGCWATAIRPPTVPVGTARLRLT
                     LTQAHEACDIDRLLEVLHGAGE"
BASE COUNT         5588 a         6455 c         6114 g         5612 t
ORIGIN      
        1 gacgggtccg gctcatagcc cggcgtcgta atgcgtggga tctctttttt cagcaatttt
       61 tcgatatcac gcaacagttt atgctcgtca acacagacca gcgacagcgc ctcgccagtt
      121 gccgccgcgc gaccggtacg gccaatacgg tgtacataat cttccggcac gttcggcagt
      181 tcatagttga ccacgtgcgg cagctcttca atatccagac cacgcgccgc aatatccgtc
      241 gccaccagca cgcgaatatc gccggattta aaatcggcca gcgcgcgggt acgtgcgccc
      301 tgcgatttat taccgtggat cgccgcgctg cgaataccgt ctttattaag ctgttccgcc
      361 agatggttcg cgccatgctt ggtgcgggtg aagaccaaca cctgctgcca gttgccctgg
      421 ccaatcatct gcgacaacag ttcacgtttg cgttttttat cgacaaagtg cacgtgctgc
      481 gtcacctgct ctgaggccgt gttgcggcgc gccacttcga tttccagcgg gttgcgcaac
      541 agcttttcgg cgagcgcttt gatgtcgtcg gagaacgtgg cggagaacag cagattctga
      601 cgcttcgccg gcagtttcgc cagcacgcga cgaatgtcgt gaatgaagcc catatccagc
      661 atacggtcgg cttcatccag taccagaatc tcaatctgat ccagcttcac ggcattttga
      721 tgttccaggt cgagcagacg tcccggcgtc gccaccagca catccacgcc gccgcgcagt
      781 ttcatcatct gcggattaat gcttacgccg ccaaatacca ccagcgagcg aatattgaga
      841 tatttactgt aatctctgac gttttcacca atttgcgccg ccagctcgcg ggttggcgtg
      901 aggatcaacg cacgtaccgg gcgacgacct ttagcgtgcg gctgatgggt aatcagatgc
      961 tgcaacaatg gcagggtaaa acccgccgtt ttaccggttc cggtctgggc gctagccatc
     1021 agatcgcggc cttccagcac ggcgggaatc gcctgttgct gaataggggt aggttcacgg
     1081 taaccctgct cggcaatggc gcgcaggata tcagggttta atcccaggga atcaaaagac
     1141 ataactactc cggaccgccc cgaccgttac cggtgtagtt ttcagggaga tgctcaaatt
     1201 tggaatgaca aaaaccacaa tgtcatgaag gggcggagtg tagcagtttt tgtgatgcgg
     1261 cgcataaatt atcccgaaag gtggcaaaga caaattaatc gaccacactg gacaagtgcc
     1321 attatgagtc ataatcttaa tcaatcgatt gattaataat tagggcgtgt gatgaatatt
     1381 cccaccacga ccaccaaggg cgagcaggcg aaaagtcagc tcattgccgc cgcactggcg
     1441 cagtttggcg agtatggcct ccatgccacc acgcgcgata tcgccgcgct ggcggggcaa
     1501 aatattgccg ctattactta ctatttcggc tcaaaagagg atttatacct cgcctgcgcc
     1561 cagtggattg ctgattttct tggcgaaaaa tttcgccccc atgctgaaaa agcggaacgt
     1621 ctgtttagcc agcctgcccc tgaccgagac gccatacgcg agctcattct gctcgcctgc
     1681 aagaacatga ttatgctgct gacgcaggaa gacaccgtta acctgagcaa atttatttca
     1741 cgcgagcagc tctctcccac atcggcctat caattggtcc atgaacaggt tatcgatccg
     1801 ttgcacacct atctgacaag attggttgcc gcttataccg gctgcgacgc caatgatacg
     1861 cgcatgattt tgcataccca tgccttactg ggcgaagtac tagcgtttcg tctcggcaaa
     1921 gaaactattc tgttacgtac cggctggccg cagtttgatg aagaaaaagc ggagctgatt
     1981 taccagacgg taacctgcca catcgatctt attctgcacg gtttaacgca aaggagtctg
     2041 gactgatgaa aaaacctgtc gttatcggac tggtaatcgc agcgatcgtc gctgtgattg
     2101 ccggtggaac ctggtggtat caaagtcggc aggacgatgg gctgacgcta tacggtaatg
     2161 tcgatatccg taccgtcaat atcagctttc gcgtcggcgg caggctggcg tcgctgaatg
     2221 ttgatgaagg cgatactatc aaagccggac aggtgctcgg cgaactggat cacgcgccat
     2281 acgaaaacgc gctgatgcag gcgaaagctg gcgtgtcggt cgcgcaggcg caatatgatt
     2341 tgatgctggc aggctatcgc gatgaagaga tagcccaggc cgccgccgcc gtcagacagg
     2401 cgcaagccgc ctatgactac gcgcaaaact tttataaccg tcagcaagga ttgtggaaaa
     2461 gccgcaccat ttccgctaac gatctggaaa atgcccgctc atcgcgcgat caggcgcagg
     2521 cgacgctgaa gtccgcgcag gataaactga gccagtaccg taccggtaat cgtgaacagg
     2581 atatcgccca ggcgaaagcc agtctggaac aggcaaaggc ccaactggcg caggcgcagc
     2641 ttgatttgca ggacaccacg cttatcgcgc ctgccaacgg aaccttgctc acccgcgcgg
     2701 tcgagcctgg cagtatgctg aacgccggca gcacggtatt aacactctcg ctgacccgcc
     2761 ccgtctgggt gcgcgcctat gtcgatgaac gcaacctcag tcagacgcaa ccggggcgcg
     2821 atattctgct gtataccgat ggacgtcctg acaaacctta ccacggcaag attggtttcg
     2881 tttcccccac cgcggaattt acgccgaaaa ccgtcgaaac gccggatctg cgtaccgatc
     2941 tcgtctatcg cctgcgcatt atcgtcaccg atgcggacga tgcgttacgc caggggatgc
     3001 cagtcacggt gaaatttaat gacgaggcac ggcatgagtg aggccgttat tacgctgaac
     3061 ggtctgacga agcgctttgc gggaatggat aaacccgccg tcgcgccgct cgactgtacc
     3121 attcattccg gttatgtcac cgggctggta gggccggacg gcgcaggaaa aaccacgctg
     3181 atgcgtatgc tggcgggcca gctcaaagcc gatggcggca gcgcgtccgt attgggcttc
     3241 gacccgatac aaaacgacag cgagctgcac gcggttctgg gctatatgcc gcagaaattc
     3301 gggctgtatg aagatcttac cgtcatggag aaccttaatc tctatgccga tttgcgcagc
     3361 gttaccggcg agatacggga aaagaccttt gcccgtttgt tggagtttac cgccctcggc
     3421 cctttcactg gccgtctggc gggaaaattg tccggcggga tgaagcaaaa actggggctg
     3481 gcctgtacgc tggtcggcga accgaaagtg ctgctgttgg atgaaccggg cgttggcgtt
     3541 gacccgattt cacggcgcga gttgtggcaa atggtccacg aactggcggg cgacgggatg
     3601 ctgattttat ggagcacctc ctatctggat gaagccgaac agtgtcgcga tgtgctgctg
     3661 atgaatgaag gcgagctgct ctatcagggc gaacctaaag cgctgacgca aacgatggcc
     3721 ggtcgtagct ttctgatgag tagtccacag gaaaacaacc gtaagttact acagagagcg
     3781 ctcagactgc cgcaggtgag cgacggcatg attcaggggc gttcggtacg cctgatcctg
     3841 aaaaaagagg cgaccgcagc agatattcgt caggccgaag ggatgccgga aatcaccctc
     3901 aatgagaccg cgccgcgttt cgaagatgcg tttatcgatc tgcttggcgg agcgggaacc
     3961 tcggagtctc cgctgggttc aatcctgcat acggttgaag gcactgccgg cgaaacggtg
     4021 attgaagcgc aggaactgac gaaaaaattt ggcgatttcg cggccacgga ccatgttaat
     4081 ttcgtcgtac aacgcggcga gatttttggc ctgctcggcc cgaacggcgc gggtaaatca
     4141 accaccttta aaatgatgtg cggcctgctg gtgccgacgt ccggcaaggc gctggtgctg
     4201 gatatggacc tgaaagtcag ctccggcaaa gcccgtcagc atctgggcta tatggcgcaa
     4261 aaattttcgc tttacggcaa cctgacggtt gagcagaacc tgcgtttttt ctccggcgtc
     4321 tacggtttgc ggggccgcgc gcaaaatgaa aaaattcagc gcatgagtga agcatttggt
     4381 ctgaaaagca tcgcgtcgca tcccaccgat gcgctgccgc tgggttttaa acagcgactg
     4441 gcgctggcct gctcgctgat gcacgaaccg gatattttat tccttgatga accaacgtcc
     4501 ggggttgatc ccctcacccg ccgtgaattt tggctgcaca ttaatagcat ggtggaaaaa
     4561 ggggtcacgg taatggtgac gacccacttt atggatgagg cggaatattg cgatcgcatc
     4621 ggactggttt atcgtgggaa gcttatcgcc agcggtacgc cggacgatct caaagcgcag
     4681 gccgccgatg agcaacaggc cgatccgacg atggagcagg cctttatcac tctcatcaat
     4741 gactgggata aggagcatac gcatgagtaa gtctctctcc tggcgccgcg tgcgtgcgtt
     4801 gtgcgtcaaa gagacgcgcc agatcgtgcg cgatcccagt agctggctga ttgcggtggt
     4861 gatcccgctg ctgttgctgt ttatttttgg ttacggcatt aacctcgact ccagcaagct
     4921 gcgggtgggg attctgcttg aacagcaaag ccaggaggcg ctggatttca ctcatgcgat
     4981 gaccggttca ccctatatcg acgcgaccat tagcgataat cgtcatgaat taattgaaaa
     5041 aatgcaggcc ggacgcattc gcggactggt ggtgattccg gtggatttcg cgcagcaaat
     5101 ggcgcgcgac ggtgacagcg cgccgattca ggtgattacc gacggcagcg agccaaatac
     5161 cgccaacttc gttcagggct atgttgaagg catctggcaa atctggcaac agcagcgcgc
     5221 ggaagatcgc ggcgacacct ttgaaccgct tatcgacgtc cagacgcgct actggtttaa
     5281 cccggcggcg atcagtcagc attttatcat tcccggggcg gtgaccatta tcatgacggt
     5341 aattggcgcc atcctcacct cgctggtcgt tgcccgcgaa tgggaacgcg gcacgatgga
     5401 ggcgctgctc tcaaccgaag tgacgcgtgt tgaactgctg ctgtgtaagc ttattcccta
     5461 ttattttctc ggtatgctgg cgatgctgct ctgtatgctg gtatcggtgt ttattctcgg
     5521 cgtgccgtat cgcggttcgc tggtaattct gtttatcatc accagtctgt ttttactgag
     5581 tacgctgggg atggggctgt tgatttccac catcactcgc aaccagttta acgccgcgca
     5641 ggtggcgctg aacgccgcgt ttttgccttc gattatgctg tccggattta tcttccagat
     5701 agacagtatg cctgcggtga tccgcgcggt gacctatatt attccggcgc gctattttgt
     5761 cagcaccctg caaagtctgt ttctggccgg caatattccg gtcgtgttag gcgttaacgt
     5821 actgttttta atcgcctcgg cggtgatgtt tattggcctg acgtggctaa aaaccaaacg
     5881 acggctggat taaatatgtg tatggataat tgtcgtcgta ggccggataa ggcgctcacg
     5941 ccgccatccg gcattatgcc tgatgcgctt tgcttatcag gcctacaaac tggactgaga
     6001 ggacgggcat gtttcatcgt ttatggacgt taattcgcaa agaactgcaa tcgcttttac
     6061 gcgaaccgca aacgcgcgcg atcctgattc tgccggtgct gattcaggtc atcctgtttc
     6121 cgttcgccgc gacgcttgaa gtcactaacg cgactatcgc catctataac gaagataacg
     6181 gcaaacattc ggtagaactt acccagcgtt ttgcccgcgc gaaagcgttt acccatgtgc
     6241 tattgctgaa cagtccgcag gagatccagc cgactatcga tacgcaaaaa gcgctgctgc
     6301 tggtgcgctt cccggcggat ttctcgcgga atctggatac cttccagcct gcgccgatgc
     6361 aactcattct tgatggacgt aactccaaca gcgcgcaaat tgccgccaat tatctgcaac
     6421 agatcgtcaa ggagtatcag cagacattga tggacggcaa gccaaagccc aacaatagcg
     6481 aactggtggt acgcaactgg tataacccga atctggacta caagtggttt gtggtgccct
     6541 cgctgatcgc catgatcacc actatcggcg tgatgatcgt cacttcgctg tccgtcgccc
     6601 gcgagcgtga acaaggcact ctggatcagc tgctggtctc tccgctcacc acctggcaga
     6661 ttttcgtcgg caaagcggtg ccggcgctga ttgtcgcgac cttccaggcc acgatcgtgc
     6721 tggctatcgg catttgggca taccaaattc ccttcgccgg ttcgttagcg ctgttttatt
     6781 tcacgatggt gatttacggg ctgtcgctgg taggctttgg cttgctgata tcagcacttt
     6841 gcgccacgca acagcaggcg tttatcggcg tctttgtctt tatgatgccg gcgattttgc
     6901 tctcgggtta tgtctcgccg gtggaaaata tgccggtctg gctgcaaaac ctgacgtgga
     6961 taaatcctat ccgccacttt actgatatta ctaagcaaat ttatcttaag gacgcgagtc
     7021 tggggattgt ctggggaagt ttgtggccgc tactggtgat agcggccacc acgggttcag
     7081 cggcgtatgc gatgtttaga cgcaaagtga tgtagctttt tatctttcgc cagtagcgag
     7141 accacggcgg gcccggccag gatagccagc cccgccagcg ccagtaaaac attgttttgc
     7201 aatacgcggg atagcagcca gaggacaatc agcgcggtgc caaagtacca ggtggtagtc
     7261 agctcttcca gcacatccgc cacatcgcgc cagcgctgct catgatggcg ctgcaacgcc
     7321 agcatcaata gtaccgtcac gccataaagc acgcataatc ccaggccgac gcgcactaat
     7381 gtgccgctca tccagcctat taccagcatc gccactacca gtaaatgcaa cataatctgc
     7441 caacaaccga ggccggttgc gacacgaacg cgttgttgcc acttcatggc ttttctcctg
     7501 aagcattttt ctctcattat tcagagtacc gaactttacg gaaaattccg taagaccgca
     7561 tctttttgtg acgacgacta cactatttca atcaggatag tgacgcggac aggaagaaaa
     7621 tgactcaaca cacgcgaaat ttttcattca aagtgctcac aattaatacg cacaaaggtt
     7681 ttaccgcctt taataaacgc ttcatcctgc cggagctgcg cgacgccgtc agaacggtcg
     7741 gcgccgatat cgtctgtctg caagaagtga tgggcgcgca tgaagtgcat ccgctgcata
     7801 tcgaaaactg gccggacact acccactatg aatttttggc cgacaccatg tggagcgatt
     7861 tcgcctatgg ccgtaatgcg gtctatccgg aaggccatca cggtaacgcg gttctttctc
     7921 gctatcccat tgaacattat gaaaatcgcg gcgtctcggt cggcggtagc gaaaaacgcg
     7981 gcgtgctcta ttgccgcatt acgccgccca tgctcaaccg ccctatccac gtcatgtgcg
     8041 tacatctcgg cctgcgggag agccaccgcc aggcgcagtt aaccatgctg gcgggatggg
     8101 tgaatgcctt gccggaatca gaaccggtgc tggtggccgg agactttaat gactggcggc
     8161 aaaaggccgg cccgccgtta aacgcggccg ggctggagga gatattcacc cgtgcccatg
     8221 gccgaccggc gcgcacattc ccggtgagta tgccgctgct gcgactcgat cgtatttacg
     8281 tcaagaatgc gaacgccagt tctcctgggg cgctaccgtt gcggaactgg cgacatttat
     8341 cagaccatgc cccccttagc gcggagatcc atctatgaaa tgcggctggc gtgaaggtaa
     8401 tcaaattcag ctactggaaa acggcgacca gttctatcct gccgtgtttg aggctatcgc
     8461 tcaggcacag caaaaaatca ttctggaaac ctttatcttg tttgaagatg aggtgggtaa
     8521 aaaactccat gccgctctgc taaaagctgc acagcgcggc gtaaaagccg aagtattact
     8581 cgacggctac ggctctcccg atctcagcga cgcgtttgtc ggcgaattaa cctcggcggg
     8641 cgtgattttt cgctattacg acccccgccc gcgtctactg gggttgcgaa ccaatatctt
     8701 ccgccgaatg caccgcaaaa ttgtggtgat tgatgatcgt attgcctttg tcggcggcat
     8761 taactactcc gccgaacata tgtcggatta cggcccgcag gcgaaacaag actacgcggt
     8821 acgggtcgaa gggcctgttg tggccgatat cctgcaattc gaagtcgaga atctgccggg
     8881 gcaaagcccc gcgcgccgct ggtggaagcg ccatcatcag gctgaagaaa atcgccaccc
     8941 cggcgaagcg caggcgctgt ttgtctggcg ggataatgaa gaacaccgcg acgatatcga
     9001 acgtcattat ctgaaaatgc tgacccaggc aaagcgtgaa gtgattatcg ctaacgccta
     9061 ttttttcccc ggctatcgct tgctccacgc aatgcgtaaa gccgcccgcc gtggcgtgag
     9121 cgtaaaactg attgtccagg gagaaccaga catgccgata gtcaaagtcg gcgcgcggtt
     9181 gctctataac tatctggtga agggcggcgt gcaggtttat gaataccgac gccgtccgct
     9241 gcatggcaaa gtggcgctga tggacgatca ctgggccacg gtagggtcga gtaatctcga
     9301 tccgctcagc ctgtcgctta accttgaagc taacctgatc attcacgatc gtacttttaa
     9361 ccagacccta cgcgataact tacaaggcat catcgtgaat gattgtaagc aggtcgatga
     9421 gtctatgctg ccgaaacgta cctggtggaa cctgaccaaa agcgtgctgg cgttccactt
     9481 tttacgccat ttcccggcgc tggtcggctg gctacctgcg cataccccgc atctggcgca
     9541 ggttcccccg cctgctcagc cggaaatgga aacccaggat cgcgttgatc cagaaaattc
     9601 aggagtgaag ccctaatggc taaatcgcat ccgcgctggc ggctggctaa aaaagtgctg
     9661 acctggctgt tttttattgc ggtcgtcgtt ctgctggtgg tttatgctaa aaaggtcgac
     9721 tggggtgatg tctggaccgt catccgcgac tataaccgca cggcgctttt aagcgctgta
     9781 ggactggtga tcgttagcta tcttctgtac ggctgctacg acctgcttgg acggctttat
     9841 tgcggccata agctggcgaa gcgacaggtg atgttggtat cgtttgtctg ctatgcattc
     9901 aacctgacgc tcagcacctg ggtcggcggg atcgggatgc gttaccgact atactctcgc
     9961 ctcggattgc ccggcagtac tattacgcgc attttctcac tcagcattac cactaactgg
    10021 ctgggctata ttctgcttgg cggcatcatt tttaccttcg gcgttgtcca gcttcccgac
    10081 cactggtata tcgatgaagg cacgctacgt attctcggta tcgttttatt gttgattatc
    10141 gcggtctatc tgtggttttg cgcctttgcg aagcggcggc atatgacgat taaagggcag
    10201 aaactggtgc tgccgtcatg gaaattcgcg ctggcgcaga tggcgatctc cagcgcgaac
    10261 tggatggcga tgggcgccat catctggctg ctgatgggtc aggatgtgaa ctatttcttt
    10321 gtactgggcg tactgctggt gagcagtatc gcgggcgtca tcgtgcatat tccggcaggc
    10381 atcggcgtgc tggaggccgt attcctcgcg ttgctggcgg gcgaacatac gtcgcaaggc
    10441 acgattatcg ccgccctgct cgcgtaccgt gtgctttact attttattcc cctgttgctg
    10501 gcgctggtgt gctatctgat cctggagagc cgggcgaaga agttgcgggc gaaaaacgag
    10561 cgggcgatgg cgaaatgaat ttaagcagac gcgttttcgc tttccagcac aacgcgtttt
    10621 atccggtaaa aataaacata tgctgagaaa aaagacgtat tcatctgtaa gcgggaaaaa
    10681 agcagcaatg accagctaaa cagcagcagg agcacttcgt taaactcacc catgaatact
    10741 gatgacaggg tacagaacgt tgccaacgta acggaaataa tggccagcaa tagcacatac
    10801 cggtaaataa tgaccccgct catgttccca tgacaatccg gtaatgaaat gagaaatcag
    10861 cgctggcggg catttcttat taaaatcctc accgccattt ttaatggcgc gagtgacgtc
    10921 tttagcttca caaaacgcta accaaaattg tttgccacat aatttactca ttatacccat
    10981 catcaccaac ctgaataaaa aacctgcaac acctacggcc tgaaagataa tagtatttcc
    11041 agaatcatca aaatgatata acgacacagc gtaaccacag cattaataat gccaaggtaa
    11101 agcgtcagcg cgccaaataa agcgcaacga ggcagggatg aaaactcgct gtggtataac
    11161 atgcgggcat aaccatgaag tgtcgatttt tctagtgctg taatcaatgt ccataccaat
    11221 accgtcagca cactgactat ccagaccaga gtgctactgg ccaccaggct attgacaact
    11281 atcgcagcga tgatcccgct taccgccata aaaattaacg gcctgaatag accagaactg
    11341 atattcaggt agaaaataaa taaggcatta agactaaaca tgattccaac aatcacgaaa
    11401 atggtcgcgc cacctgagaa aaggtaagct aatgacacgc cggtaagcgt aatgatggca
    11461 atatatatca acgttgcgac aacagtgcca aagcgggaaa gacaggtaac ggccccatac
    11521 cccaggccaa gcaaaagtgc tgatatccac aaaacaacaa caggttgaac gtgagttatc
    11581 aaaaaatgac tatacaacgt taaccatata ataccggcgg tacaccatag tcccagcgca
    11641 gtataccaat aggtaaggga taacattgtc gcgggaataa atgctatttg ccgtatacgt
    11701 attgcagcca gaggtcccac ttgtcattta tcactcttct tattatcacc gtaataagaa
    11761 tggcaagcgc aggaaaatat ttctaagatg tttatgctgt tttgccctaa atatagtcct
    11821 aaaaaaaatc ctggcgcagg gccaggattt taagagatca atatgattag cggcgattgc
    11881 caaaaatacg cagtaacatc aggaacaagt tgataaagtc caggtacagc gttaacgcgc
    11941 cgagaatcga atacttacgc agattagcgc tatcgcgggt atctatttgc tcgccgatat
    12001 ttttcagttt ctgcgtgtca taggcggtca gaccgacaaa caccaccacc ccgatatagg
    12061 ttaccgccca catcagcgct tcactcttca gccagaaatt gaccagcgag gccagaacga
    12121 taccaataag cgccataaac agcatattgc cgaaaccgct aagatcgcgt ttagtggtgt
    12181 acccatacag gctcatggcg ccaaacattc cccccgtcac cacaaacgtg ctggcgatgg
    12241 aggaataggt gtaaacgata aaaatactgg ataacgtcaa atccggttag cgccgaatag
    12301 agcataaaca gcgtcgtcgc cattccggcg ctaagtttat gcaccagtcc cgacagaaca
    12361 aacaccagcg caagctgagc aatgattaag ccaaagaagg tgatcttact ggaaaagaca
    12421 aacatcatga cggctggcgt attagccgca taccacgcga taaacgcggt cagtaacagt
    12481 ccgaccgtca tccagccata cacttgcgcc atataggtct gcaggccaga ccgcgcctgc
    12541 actattgaat cagatcgtgg aaatctgtcc atgatgaact cctgtgtgga aatgataccc
    12601 taaagcgtat cacattctgc taccaacgtt tcgccaactg ctggtcgctg tcgcgcgctt
    12661 cgacccagcg atcgccttcc ggcgtggctt cacgcttcca gaacggcgca cgggttttca
    12721 gataatccat aatgaactga ccggcgtcga acgcgctact gcggtgcgcg ctggtgacgc
    12781 cgacaaacac aatctcatcg cccggccata attcgccaac gcgatgaatc accgtgaccc
    12841 gccccagcgg ccagcgggaa cgcgccttcg cgacgatctc cgccagagct ttctcagtca
    12901 tgccgggata atgctccagc gtcagcgcct taacgctatc gcccaggtta tgattgcgca
    12961 cttttccggt aaaggtgacg accgcgccgt cttcgtcgcg cgccgccagc caggaatatt
    13021 cctccccgac gctaaacggc gcagggccga ctacaattcg cgtttcgtgc atgttagccc
    13081 cccgtgactg gcgggaaaaa cgccacttca tcgcccgccg tcagcggatg gtcaaaactt
    13141 accagcgtct ggttgaccgc cgccaacagc ttgccgtctt ccagcgccag cgcccaacga
    13201 tcgctctttg tcgccagatg ctgtcgcagc gactcaacgg tggaaaaatc tgctggaaga
    13261 tccagcgcat cagttcctgt aagctcgcga acgtgggcga agaaaagcac tttaatcatg
    13321 cgcatccacc ttaaaatccc ccgatttgcc gccgcttttc gccagcagac gcaccggacc
    13381 aattactata tctttttgta ccgctttgca catgtcgtag atggttaacg ccgcgacgga
    13441 cgccgcggtt aatgcttcca tttcgacgcc ggttttaccg gtcagacggc acagagactc
    13501 aatacgtaca cggttatgct ccggctcggc ctgaagctga atctccactt tacttagcag
    13561 tagcgggtgg cacagcggga tcagctccca ggtgcgttta gcggcctgaa taccggcaat
    13621 acgggcagtc gcgaaaacat cgcccttgtg gtgtttgcca tcaacaatca tcgccagcgt
    13681 ttcactacgc atggtaacga atgcttccgc ccgtgcttca cgaacggttt ccgctttcgc
    13741 ggaaacgtcc accatgtgcg cttcgcctgc ggcgtttata tgggttaatt gcgacatcgt
    13801 tatttcttta aatgagggtg aaaattacat gggcgtgtac gggcatccag ctgcggcgca
    13861 atgatattct cccatgcggt tctgcacgct tttgtggagc ccggcatggc gaaaatcaag
    13921 gtgttattcg ccacgccagc taccgcgcgc gactgcagag ttgcggtgcc gatctcttca
    13981 aacgagagca tgcgaaacac ttcgccaaat ccttccactt cacgatcgaa cagcggcaac
    14041 agcgcttccg gcgcctgatc gccttcggtc aaaccggtcc cgccagttat caatacgacc
    14101 tgcacctcat cactggcgat ccaggcggaa acctgggcgc gaatcgcgta acggttctct
    14161 ttaacgatgg ctttcgccac cacttcatgc ccggcctcct gcgccgaatc acgcagataa
    14221 tgaccggagg tgtcgtcttc ttcgccgcgt cggctggaaa cagtaagaat agcgatgcgg
    14281 gtcgggataa attcagcgct gacctgactc atctgaaatc tccttattaa ggattaaccg
    14341 ccaatgtaag ataaattttg cgtaatacca gtattgctct ggtgaaggaa atgggtctgc
    14401 tttttctccc gcaacgcgtc ggaaatacgt tcctcaagcg cgtattgctg cgcatcatcc
    14461 tgtaacaggt cgcgtaaact cacgccgccg tcgccaaaca gacataaatg cagcttaccg
    14521 acggacgaaa cacgcaggcg gttacaggtg gcgcagaaat ctttttcgta cggcataatg
    14581 agaccgatct caccggcgta atcggggtga caaaaaacct gcgccggacc atcgctacgc
    14641 tggcggagct ggtggatcca accgcgctta atcagctcgt cacgtaatac ctgacccgaa
    14701 atatgatgtt tgcggaagag atcgctcccc tcgcccgtct ccataagttc aatgaagcgt
    14761 agctgaatgg ggcgaggctg aatccaggca aggaaggtat ccaactgatg gtgattcacg
    14821 tcgcgcatca gcacggtgtt gactttcacc ttttcgaaac cggcgtcaaa ggcggcatcg
    14881 atgcccgcca tcacctggcg gaatttgtcc tgaccggtaa tcgcatggaa ctgacgcgca
    14941 tccagactat ccacgctaac attgacgccc gtcagccccg cttcgcgcca gttcgcggca
    15001 tcgcgcgcca gtcgataacc gttagtggtc accgcgatct ggcgaatagc atcattttca
    15061 cccacggcgg caatgatgtc ggtaaaatcg cggcgtaatg aaggctcgcc gccggtaaga
    15121 cgcacctttt ccgtgccaag actggcaaaa gcgcgcgtaa cgcgacgaat ttcatcgacg
    15181 gtaaggaaac cgttgttagt gacgccgcca ggtttgtagc catccggcag acagtaggtg
    15241 caacgaaagt tacacacatc ggtaatcgac aaacgcaagt agtaaaactt acgcgcgaaa
    15301 gcatcggtaa gttgtgaagc catgtacacc tttccaaata cgggaggcgg agtcatttct
    15361 tcctgcgccc tggtggcaaa cgttaaacgt tgtcacggcc aaagcaccat atcaaaaatg
    15421 acccaggtgc agaggctaga gtgtttattg tggttacgcc gatactagcg tgtaaatgac
    15481 aatttcgcca tcacgctttc gctatataaa catatacata gcgatatgat cgtgctattt
    15541 agcgacagaa tacgtgaaaa tcacactttt acattgatat atatcattta gccgtggtaa
    15601 cgccctcgct ataaaggggt agtcgggaat aattaattgt cttttagccg gtcggctaat
    15661 tgctgaaaac ccgcgacttg cgctactgta gcgctgctta tttgacttca ggaattttta
    15721 tgcgcaatcg tacgctggct gaccttgatc gtgtcgttgc cctcggcgga gggcatggat
    15781 taggacgcgt cctctcctcg ctttcttcat taggttcgcg cctgaccggc attgtgacta
    15841 ccacagataa cggggggtca actggccgta ttcgccgctc ggaaggcggg atcgcctggg
    15901 gcgatatgcg caactgtctg aatcagttaa ttaccgaacc cagcgtcgca tccgctatgt
    15961 ttgagtaccg ttttggcggt aatggcgaac tttctggtca taacctcgga aatttgatgt
    16021 taaaggcgtt agatcacctg agcgtgcggc ctctggaagc gattaattta attcgtaatc
    16081 tgcttaaagt ggacgcgcag ctgatcccga tgtcggagct accggtagat ctgatggcga
    16141 ttgacgatca ggggcatgag atttatggcg aggtgaatat cgatcagtta gcgacgccgc
    16201 cgcaggagat catgttaacg ccaaacgttc cggcgacgcg ggaagcggta caggccatta
    16261 atgacgcgga tctgattctg attggccctg gcagttttta taccagcctg atgccttgcc
    16321 tgctgctgga tgaactggcg caggcgctgc ggcgcacccc agcgccaatg gtgtatatcg
    16381 gcaatctggg tcgcgaactg agtctgcccg ccgccagttt aacgctggtc gataagctgg
    16441 cgatgatgga gcaatatatt ggcaaaaaag tcattgacac agtagtggtt gggccgcgag
    16501 ttgacgtcag tgcggtgaac gatcggctgg tgattcagga agtgctggag gccagcgata
    16561 tcccctatcg ccacgatcgt cagttattac acaatgcgct ggaaaaagcg ctacaggcgt
    16621 tgggttaagc ccgtttaccg acgacgctgc gcttatcaga agcctgttta caccgaaggg
    16681 taaacaggct ctctccctct tctgataaac tgcgttcagc tatcaccagt aggcgctcat
    16741 gagcgagctc acctcttttt tcagcaatat attctccatg atctcagtaa agagggtctg
    16801 attgatctct tccattatcc gcattccagc catgcgctct gcgtcaggat cacctgctat
    16861 tcctaacgct tccagttcag cattgacccg gctctgatac tcatccgttt caatacactc
    16921 agcccttttg gccatcattt cacgccactc ttctggcgct atacgctcca gcactttatg
    16981 ccacggcccc cacagcgcaa accatttgtg aaaatcccta ttttcagcaa tttttatcct
    17041 tatttccgcc tcgtccaggt cagactcagt gatacccgaa acgttataaa atcgcatatc
    17101 ctgggtcatt gttgtcagcg acagcgactc tcgtaactga ttctgaaaac ccagatatac
    17161 ttcgatttcg tcaataaaaa acagccgttt taccttttct ctggcgagcg attctatttg
    17221 ctccagccga aagatttcac gccccgccat aatcagttcc gctaagtggc tatcaaaggc
    17281 gcctctttca gcatcatgaa ccaacgtcgc ttcctgcatt tgatggtatg ccagtgtgac
    17341 ccgatcttca cagcttatcg ttgcatccat cgctataata aatgcggttt ctcttagtgc
    17401 gctatcatca gccaggcgca ttagccaggc ggagacttgt tccttaaaat ccgaatgtcg
    17461 ggtgttctgc gtatcgctaa gacgatccag aaacatgctg aaggctgccg cgtttacttc
    17521 cgtctcaaac gcccgccatt ggttgacgtc ttcctcctcg agattggtta gccacccctg
    17581 gacagcttga tgcagtggtc gagttacccg aacaattgaa aagtcgccca tggcaaaaaa
    17641 tacctggggt ccctgataac ccgcagagga cattagccgc tgcatattct gtattgttcg
    17701 ttctgaaaaa ggattatgtt ctacgattat tcttgtaggt tgaggtcctt caccacgaaa
    17761 acggggtaac gactctggga gacggaccag gcgattgcga gaggcctgca ttatttgtaa
    17821 tgccgccggg aggttttccg gtagattact caatgcgtta cgggaaacgt ccagcgttgt
    17881 tatcgtggga ggtagtgttt caggcagaac agtaatctga tttttactta catccaggaa
    17941 ctgtaattct ggtggtaacg atgcgggcag actggttaaa gcattttcgc cggcctccag
    18001 attcttcagg cccggcggca atgtttcagg cagagcggtt aacgaattac tctgcacatt
    18061 caaatgggta atccctgacg gaagatgttc tggcagtgtc cttatgcggt tatcataaac
    18121 gctcaggtac cgaagttcct caggtagatt ttcaggtaag gaactaattt tattatgaaa
    18181 aagatccagc gattgaagcg ctgaaggcaa acgttccggc aattcagtaa tacggttaat
    18241 gctcagctcc attttctgta tggtatccgg taacgtggca gggatactgg ttagctgatt
    18301 actgctggca tacagggtct ttatatttcc ctgtaaattt tccggcaaac ttttcagttc
    18361 attgttatcg agtatcagag tagttatctg ctcaggaata caggcgggta tagtggtaag
    18421 tcctaatatt ttcagacgga gttccgtctt attatttttc aggcagtcac gcatccgttg
    18481 tacggcttct tcacgatttg ctgcctcttc cgctggcgcc gcttttacct actcagacca
    18541 gattaactca taattcacag tatctttgga gccggaagcg ctactcgcct gcttgctttc
    18601 tgtcacacgg gtataggtga ctgacttccc ccctccctca acggtatagc cttctgtatt
    18661 aaaaactata gacagaattt cctgactatt ttcactcaaa atacagtatt ggtctgcccc
    18721 tcctctacta tactgaatat tatccgcata cgccgggaaa gctaacatcc ttaaacattc
    18781 aaacttgctt ttgatctctt ctggcgaggc ggtttcaggt ggatgacaaa gataagcgat
    18841 tcagctttgt gcttcaacct gatgttctga agagaaaaag gcacttattt tattccatat
    18901 ctcttctttt aaaggcacct ctgttgatgc ctcattgcta atactttgat gccttgccgt
    18961 agattgtata ttagtaatat taaacatatt ttccctacct gatctgaacg taacctaaag
    19021 taacagataa ggatattctc aactttaaac aagaggccat agtcgtcatt atttcggaca
    19081 aatcattcag tatttgcagc gcttgactta taaatgctcg cgcttccatc acctcttttt
    19141 taagtagaat gatgtaatct gttgccatga cacgctttca acgaactcac ataagattaa
    19201 aatgacgatc atgaggatag ctataccgat aatacggggc gttttttttc atagccgagg
    19261 agagagggaa aattagcgtt gggttcagcc tcaacgctaa ttttcttcag ttgtgattaa
    19321 actagctacc ccattgatgt tttgactttt tcgacaatct cgttagtcaa agcctgtcac
    19381 tgtttttcat tcctgactga cttagccctg actattgcac tgaaattctc aaaagcgagc
    19441 catggtaacg atgactcgct ggcgatcgac acattgtcag gacgccgcga taaacaactc
    19501 gcgtaactgg tgcaactggt cgcgaatttg cgcggcttct tcaaactcca gattttgcgc
    19561 gtgctgcatc atttgctctt ccagttcatg aattttctgc tgcaacgctt tcggcgtcat
    19621 atccagttcg acaattccgg cttttgccgt agaacggccc ttgcctttcc ccttcgcttt
    19681 ggttttcgca atgttctgcc ccagcgccag gatgtcgacc acttttttgt tcagcccctg
    19741 cggagtgata ccgtgctctt cgttgtactt ctgctgcttc tcgcgacgtc gctcggtttc
    19801 gccaatcgcc ttcgccatcg acggcgtgat tttatcgcca tacagaatcg ctttaccgtt
    19861 aacgttacgc gccgcgcgcc ctatggtctg aatcagggag cgctcggagc gcaggaagcc
    19921 ctctttgtcg gcgtccagaa tcgccaccag cgagacttcc ggcatatcca gcccttcgcg
    19981 cagcaggtta atccccacca gaacgtcaaa ctcgcccaga cgcaaatcgc ggatgatttc
    20041 catgcgctcc acggtatcaa tatctgagtg caggtaacgc acgcgctcgc cgtgctcttc
    20101 cagatattcg gtcaaatctt ccgccatccg tttggtgagc gtagtgacaa ggacacgctc
    20161 attaatggcc gcacgctgac gaatttcgga cagcagatcg tccacctggg tcgccaccgg
    20221 acgcacttca ataatcgggt ccagcagccc ggtcggtcgc acgacctgat ccaccacctc
    20281 atcaccagat ttttccagct catagttgcc gggcgtggcg gaaacataga tagtttgcgg
    20341 cgctaaggct tcaaactcct caaacttcag cggacggtta tccagcgccg aaggcagacg
    20401 gaagccatac tcgaccagcg tctctttgcg cgcccggtcg ccgcggtaca tgccgcctat
    20461 ctgcgggatg gtgacatgag actcatccac caccagcagt ccgtcggcgg gcagataatc
    20521 gaacaaggtt ggcggcggtt cgcccggccc gcggcccgac agaaagcggg aatagttttc
    20581 aatgcctgag cagtagccca gctcgttcat catctctaaa tcgaactgcg tgcgctggct
    20641 taatcgctgc tcttcaagca gcttattatt tgccagcaag accttacgcc tgtccgccag
    20701 ctcatctttt atctcttcca tcgcctgcag aatacgctcg cgcggcgtca cgtagtgcgt
    20761 tttgggatag atagtataac gtggcaccgt tgactctacc tgcccggtta acgggtcgaa
    20821 cagcgacagg cgttccactt cttcatcaaa cagctcaacg cgtagcgcaa tgtcgtcaga
    20881 ttcagccggg aagatgtcga tcacttcgcc gcgcacgcga aaggtaccac gctgaaaagc
    20941 ttgatcgtta cgggtgtatt gcaattccgc cagccgacgc aaaatcgcgc gctggtcaat
    21001 cagcattccc accgtcagat gcagcatcat tttcaggtag agatccggat cgcccagacc
    21061 gtaaatcgcg gacacggaag ccaccaccac gacatcgcgt cgctcaagca acgctttcgt
    21121 tgccgacaac cgcatttgct caatatgttc gtttaccgaa gcgtcttttt cgataaacgt
    21181 atccgaactt ggcacatacg cttccggctg atagtagtca tagtaggaga cgaaatactc
    21241 caccgcgttt tccgggaaaa actctttcat ttcgccgtag agctgcgccg ccagggtttt
    21301 attgggcgca agcaccatcg ttggccgctg caagtccgca atgacgttgg cgatggtgaa
    21361 tgtcttcccg gagccggtca cgcccaataa cgtctgatgc gccagcccgt cctccagccc
    21421 ctcttccaga cgacgtatag cgtccggctg atcgccagaa ggtttaaaag cggaattcag
    21481 tttgaacggt ttactcatga gcggctacct gaaggagtga gcgggcaggg atgtaatttt
    21541 actctcgacg gtgaatattg ccaataaaaa atactggatg aaaaaacagt aacactccag
    21601 tgtataatgg ctatcggcag ataccccacg ctatttagag gtaaaacata gacagtcgcg
    21661 gggtaaaatt ccagcagtgt gctggttatc cccagaccag agtctttttt aacatttgtc
    21721 aagtcggatg atgaaagttt tatgtcaacg tatccccctt cctttacaac cattgatttt
    21781 atataacttg ctgtctaaaa agggatattt tctcaagccg tctttcgcgc caatttagtc
    21841 gcaggccgcg tcgcctctcg cttacgttgt gttttctaac tctaatacac aaggttatcc
    21901 acaggaatag tggataactg cttccagccc gtatcccctg ccgcctggca aaatcagccc
    21961 ctgacgtttt cgccgggcga taaaaaaaaa ttatcgctat ttttggcaga ttattggcta
    22021 acgagaaggc aaaaattgag gcgtagacgc tcacattttg cacattttta gcatggcgac
    22081 gtcaggaggg tctggcgaaa gaacagcagg atcgtctgat cctgcaagaa ggcggttttt
    22141 aagcgcggtc aggcgcgttc caaggggcta aggtccagat actgtcctgt cgccgcctgc
    22201 gatggagaaa cgcccagcca cgggatttcc cctaacagcg gggccggtat gacgcggcga
    22261 agcgtcgcga gatattcacc atgacgcgcg cctggcggct gcatgtcgtt ggctatccat
    22321 ccgacaagcg gtaatccggc ctgttctacc gccagcgccg tcagcatggc gtgattaata
    22381 cagcccagct tgacgccaac aaccagaatc accggcagct gctccgtctg tacccagtcg
    22441 gcaaacgtca gcgtggcaga gagcggtgta aaccagccgc ccgccccttc tgtcaacacc
    22501 cagtctgcct gcgcctccag cgttcgtaat ccgcgtgata acaccgccgc gtctatcgcc
    22561 cggccttcgt cggcgctagc gatgtgggga gaagtaggct cggcaaaagt ataaggattg
    22621 atagcggaat aaggttgcgg caggctgctg ttacgctgca aggccagggc atcgctattg
    22681 cgtagcccgt cggttgtcat ttcgctgccg gaagcgacgg gcttatagcc tacggtttga
    22741 taacctaact gcgttgcggc ctgcaataag gcgcaactgg cgaccgtttt accgacttca
    22801 gtatcagtac cggtcacaaa atagcgttta gtcacgttca atcactccca taaaaaggtg
    22861 gtacgtcagc agatatttcc cctgccgctg cggccatgcc agttgaatct gtctaagccg
    22921 ggcgcgggtt aatacatccg tctcccgccc ttcatgaaga tgggtggcgc caatgccttt
    22981 gagcgaacgc atcgcgctca gggcatcctc aaaccacaat gtcatcgcct gagtatgacg
    23041 agacgcccgc cagccgcgta gcgcgtggtc aatggcctct tccggcaaaa agctattcgc
    23101 gtgagcgcga ttatcgacgg cctgccatgc ctgacgcagc tccggcaacg acccctggca
    23161 caaggtggta aacgccacca cgccgccggg ccgtacaacc cgatacaact cgctcaacgc
    23221 atcgcgtaaa tcgccgcacc actggaccgc caggttgctc caggccaggt caaaaacttc
    23281 ggcgtcatgg ggaatcgctt cgatatccgc cagcaaatag tgatgcgccg cctgacgatc
    23341 gcgagcctgt tgcagcatcg gcagcgaaag atccagggcg gtcacttcgc tcccccgctc
    23401 tcgccagtaa cgactcatac gtccggggcc gcagcctgcg tccaacacac tggcaaactg
    23461 gcggcctgtc aacagcgtca gcagcgcatc cgcgctgtgt tgctgtaaag aggcgtgctg
    23521 ttcgtattgc gatgcggccc ggccaaacgc cgccgcaata gcctgcttat tcacctgcgc
    23581 catgcagcac ctccagcaga cggtctatat cgcacgcttc atgcgcctgc gttaacgtta
    23641 agcgcaggcg cgccgtaccg acaggcaccg tcggcggacg aatcgccgtc gcccagcatc
    23701 cttgttgacg cagcgcctcc gccaggcgca atgcacggct gttatcgccc acgattaacg
    23761 gctggatgg
//
LOCUS       DAGWFR010000054        23208 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.055, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000054 DAGWFR010000000
VERSION     DAGWFR010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 23208)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23208)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23208
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.055"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..799
                     /locus_tag="MOX77_002161"
     CDS             <1..799
                     /locus_tag="MOX77_002161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HCA3357688.1"
                     /translation="LAAGDFTTRVTPTSADELGKLAQDFNQLASTLEKNQQMRRDFMA
                     DISHELRTPLAVLRGELEAIQDGVRQFTPESVTSLQAEVGTLTKLVDDLHQLSLSDEG
                     ALAYQKTTVDLVPQLEVAGGAFRERFTSRGLTLHYALPDSMTVFGDPDRLMQLFNNLL
                     ENSLRYTDSGGGLHISAEQRDKSLFLTFADSAPGVSDEQLQKLFDRFYRTEVSRNRAS
                     GGSGLGLAICVNIVHAHNGHLHAAHSPFGGVSITVELPLDRDLQREV"
     gene            796..1518
                     /gene="baeR"
                     /locus_tag="MOX77_002162"
     CDS             796..1518
                     /gene="baeR"
                     /locus_tag="MOX77_002162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator BaeR"
                     /protein_id="HCA3357689.1"
                     /translation="MTELPIDENTPRILIVEDEPKLGQLLIDYLRAASYAPTLINHGD
                     KVLPYVRQTPPDLILLDLMLPGIDGLTLCREIRRFSDIPIVMVTAKIEEIDRLLGLEI
                     GADDYICKPYSPREVVARVKTILRRCKPQRELQQQDAESPLMIDESRFQASWCGKALD
                     LTPAEFRLLKTLSLEPGKVFSREQLLNHLYDDYRVVTDRTIDSHIKNLRRKLESLDAE
                     QSFIRAVYGVGYRWEADACRLV"
     gene            1787..2973
                     /locus_tag="MOX77_002163"
                     /pseudo
     CDS             1787..2973
                     /locus_tag="MOX77_002163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000141078.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cytoplasmic protein"
     gene            2983..3690
                     /locus_tag="MOX77_002164"
     CDS             2983..3690
                     /locus_tag="MOX77_002164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001786138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1266 domain-containing protein"
                     /protein_id="HCA3357690.1"
                     /translation="MFLLLPPYFLAGATTKKNKPLIAARIAEEKEKDRLKDLRRDTRR
                     RQWALALADILARRNGLPIKGVELVFKLDDDKHRYLAQQVKKELGLSENLNGAALRHK
                     VEDILRRWPAGIGSSPSTFYHHLAAQGQVRDALAFDCMRTAFLTRCIAGLGWCDENEA
                     WLVLLLNAQRAQDCFDSWEDYATAYVRARRVWLTLRDTPIALAGRDLQEATHYLQDPV
                     SRWRQLPWNEFKIFEPI"
     gene            3701..5812
                     /locus_tag="MOX77_002165"
     CDS             3701..5812
                     /locus_tag="MOX77_002165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4034 domain-containing protein"
                     /protein_id="HCA3357691.1"
                     /translation="MEQDDRLLNAMFEMCNHKNPLNDGQREWHIADIPGLLREERYDE
                     LDERYNQALTESFTSREAEKRYFFAWNQMDNPFYDMDTLVEAGPQGLALIKNWQRARP
                     RSTHAWLAEAQYWNHRAWLYRSYGWARETTRAMWICAAACNERMVIAALNAIDCEPRQ
                     WMAAALTSTNSKVFGQPDWLVEFLEGADVAGQPLMEDLAEYHRHSPQEVDALMAHSGL
                     SFADAVCPNLPRPSVLPECNDDAGQKYWLAVCLAIFPTAFYVLDEYIPFRMPRWGGSH
                     EEIREFLESSVCDHLSAAEREHLELLIWWDDHRDLRIKEVDSPAEQERIIAKAEEISL
                     RAHIQESRHNTLKWLRVCYSDLDDNDALWRTLQRSIVEKVKFNNYFFDDTIKFALRDF
                     PDTWWMYNFLCQNAQQTEFAVPKIRRGYFQYAGLLGFEKDEAQGLAWLDSVADIQYNH
                     NWRAAIKNFDWFGLPEHFVPLAELGAQRNIPAALNLLGLEHNNKENNGLLPYDPAIAL
                     GYFQRAAEILHRRLALRESTPYKLIDNGGYTDYENDLQNIHFSIGICNQRLSKQELDT
                     EKRSAYEKELLDNLWLAHQFGHKEAWGLFLLNIFEVKDITLAHKHLELVQQEANKGTL
                     HAMVTLSRLHGNKHDRTLFNMKLSARWAHFAFTLYPDNEIVMDCLDHLHFDSFWKRFR
                     FAWYTVRIPNSELPGQVNSMV"
     gene            5817..6536
                     /locus_tag="MOX77_002166"
     CDS             5817..6536
                     /locus_tag="MOX77_002166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000586683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HCA3357692.1"
                     /translation="MIIQRKSLFLCALLLLFATARAEITEQQIEADCAKIPVLASQGE
                     QLYKTQKYAKALDAFEQLAAWSESCALDDNAIATAYNNVALTWIREGEWRKARAWLML
                     RPNDSKSIYNLKLIKDKLSVLPPPVSTAGEYWRYAGRASWNVLSVKALPTPSRYQVNF
                     QGYWFGLMGIYFGPNIGEFYAEITLENDKAIVALREGDDIHCDISLAFSSETIDASTD
                     TFVDCGFGANVRADGHYLRVE"
     gene            complement(6690..7289)
                     /locus_tag="MOX77_002167"
     CDS             complement(6690..7289)
                     /locus_tag="MOX77_002167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001681966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357693.1"
                     /translation="MVLPVDSTQFTQLACYYKDINSDDNIMELKLPDEYKEKTNLFNQ
                     QEIKVPVKGESFLSPYIGDGVRYYELGYFEHDGNTYKLIIYNKIGESDTLLLNVQINS
                     YDAKGNLVDALLLSSFFAYEDIVRFSDFVIRQDYTISIDSYVIYRWYEDSKDGHLVTI
                     KFKDQAPQIYIKEQYQMENGRFKLISRNAVSQGEKRSER"
     gene            complement(7505..7948)
                     /locus_tag="MOX77_002168"
     CDS             complement(7505..7948)
                     /locus_tag="MOX77_002168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000871135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357694.1"
                     /translation="MKWIIMVLVFSFSNVYAEDCSQQDFDKADMALDSLASWKAVDGF
                     YSRHSQCDVGYLREGTSEKIIRLLVDRWGELNELSALIKRKPALGDYVIDHIGEILDV
                     KDVEKIRDYSASHCQIDSKDLCKKLHDAAVYILPYMSSQYQYLNN"
     gene            complement(8064..8513)
                     /locus_tag="MOX77_002169"
     CDS             complement(8064..8513)
                     /locus_tag="MOX77_002169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010989205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357695.1"
                     /translation="MVSSTYGEENYKNIHFKNATINIPARWVANKKDDCLLISKNHIN
                     VFSYLYVCTDAATNKNSFFTKNDDGEWEAVTDGVPVLADVNITPKFIGMSAIVSCRYK
                     DDAGYHIDQCFQAVIVLSTNIMFVFIGRGDSSLFNNYKEIYRSFKVK"
     gene            complement(8581..9051)
                     /locus_tag="MOX77_002170"
     CDS             complement(8581..9051)
                     /locus_tag="MOX77_002170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001662679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357696.1"
                     /translation="MKHFFLILFGISSPFICLATSVEFNVTKGIKASITWVDNKKVEY
                     EITGSDRVAKRGYYDVDTENNIHVKYGDYNFDGKEDFVIWYTDDGMGIYDIYRVFLYS
                     EKMADFKEIKPSCGDDFINLNLNKKKRELISLYYSHNEAQRCITNVFVGENKLK"
     gene            complement(9170..9772)
                     /locus_tag="MOX77_002171"
     CDS             complement(9170..9772)
                     /locus_tag="MOX77_002171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000277025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357697.1"
                     /translation="MYKKIVILVITLIIIFFGGGWYMHKSQQQMATLVISDSENALDY
                     PNKRKWFDASRWLSTSQYIKIDDFYLLNLKHHPVNNINDAGIIVILHFAIRDAIKKFP
                     ELSKLSQMDNKEFFHFMQNKLSNEYLRTKFNEDTLEPTDDYFLFFFTYNEISYEVELL
                     RKVTEHGMMFVPYGYQVNKKGDWHRMHPSTYSCFNDIQSN"
     gene            complement(9841..10242)
                     /locus_tag="MOX77_002172"
     CDS             complement(9841..10242)
                     /locus_tag="MOX77_002172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000643727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357698.1"
                     /translation="MLCFLGGSSGYANSEKNISKELLSEYKNFSLAECIEKNYEKMGV
                     VFTKLPLKDNTRGFIDLDMGLAFYRDKDNVLASFIENKTGDFYKPRQAYGDLASVNMV
                     IYDCIDFYHSKELNIFLRKIISERNIRNEND"
     gene            complement(10254..10781)
                     /locus_tag="MOX77_002173"
                     /pseudo
     CDS             complement(10254..10781)
                     /locus_tag="MOX77_002173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016505242.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(10855..11355)
                     /locus_tag="MOX77_002174"
     CDS             complement(10855..11355)
                     /locus_tag="MOX77_002174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000142761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CdiI family contact-dependent growth inhibition
                     immunity protein"
                     /protein_id="HCA3357699.1"
                     /translation="MTFIFDVNKEYHAGANLTDKFLCLETYSGLGRYSSDPDYPCQLL
                     SIDSDDVCIGHELLQALKNSRTYTPEESEEYLSLEKTQVEYDEWVTVLMAKYNYRTRR
                     ALFKNMKYCSIICVNNIIKIQPTRHTKLEGWSWAGHDKDVIRLPVTSEPEKIGSALRQ
                     AFECCD"
     gene            complement(11486..11788)
                     /locus_tag="MOX77_002175"
     CDS             complement(11486..11788)
                     /locus_tag="MOX77_002175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000873939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357700.1"
                     /translation="MKYIIFAFIFLIPLRCMSEKLVFLDEVQTKTMNVAFSHFREHTN
                     WGLFNTMIQDDDENIKIAFYCKSHLEEARGGGMEQIIYIISKKDFKIEKINKSYSK"
     gene            complement(11798..12159)
                     /locus_tag="MOX77_002176"
                     /pseudo
     CDS             complement(11798..12159)
                     /locus_tag="MOX77_002176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001747579.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4329 domain-containing protein"
     gene            complement(12595..13014)
                     /locus_tag="MOX77_002177"
     CDS             complement(12595..13014)
                     /locus_tag="MOX77_002177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000502176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357701.1"
                     /translation="MGDFIKYLFIFPCLWSANSFAITQTQWDGNFRVEELGEQLNDRS
                     QVFLQYNLKIDSKNNRASLSMTTWHAGITCIGDYSLKINSGVLVLYYNGDEENACPYP
                     SPQFEISNKGKEYYIKGKMFSYSQPGEWLPLKRITLK"
     gene            complement(13671..14288)
                     /locus_tag="MOX77_002178"
     CDS             complement(13671..14288)
                     /locus_tag="MOX77_002178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001528503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357702.1"
                     /translation="MMKMSRTAIALSLLGMAAHPVCAAPSFEETARQVIIAFQQRDNA
                     KINALIDKKVGMYVLYRIGAGFDYKWMKKFDINKPIPDFNYLLGQVGWFSEHIPVDKE
                     FDHHTEVEYVCEKGWDHAGFFVSYTGSDNALLTFSMVNGADSGDQASDTRIANARRLE
                     LQSERVVAVPKEWGDGLIFHLSELHGLGKGWSLTLLDLVTEDCSA"
     gene            14452..15813
                     /gene="yegQ"
                     /locus_tag="MOX77_002179"
     CDS             14452..15813
                     /gene="yegQ"
                     /locus_tag="MOX77_002179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-hydroxyuridine modification protein YegQ"
                     /protein_id="HCA3357703.1"
                     /translation="MFKPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFN
                     HENLQLGINEAHALGKKFYVVVNIAPHNAKLKTFIRDLKPVVEMGPDALIMSDPGLIM
                     LVREHFPAMPIHLSVQANAVNWATVKFWQQMGLTRVILSRELSLEEIEEIRQQVPDME
                     IEIFVHGALCMAYSGRCLLSGYINKRDPNQGTCTNACRWEYNVQEGKEDVVGNIVHKH
                     EPIPVQNVEPTLGIGAPTDKVFMIEEAQRPGEYMTAFEDEHGTYIMNSKDLRAIAHVE
                     RLTKMGVHSLKIEGRTKSFYYCARTAQVYRKAIDDAAAGKPFDPTLLETLEGLAHRGY
                     TEGFLRRHTHDDYQNYEYGYSVSERQQFVGEFTGERKGQLAAVAVKNKFSVGDSLELM
                     TPQGNINFTLEQMENAKGDAMPVAPGDGYTVWMPVPQDVTLDYALLMRNFSGESTRNP
                     HAK"
     gene            16265..16444
                     /locus_tag="MOX77_002180"
                     /pseudo
     CDS             16265..16444
                     /locus_tag="MOX77_002180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461081.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="non-LEE encoded effector protein NleB"
     gene            complement(16454..16870)
                     /locus_tag="MOX77_002181"
     CDS             complement(16454..16870)
                     /locus_tag="MOX77_002181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CesT family type III secretion system chaperone"
                     /protein_id="HCA3357704.1"
                     /translation="MYSRADRLLRQFSLKLNADSIAFDENRLCSFIIDNRYRILLTST
                     NSEYIMIYGFCGRPPDNNNLAFEFLNSNLWFAENNGPHLCYDNNSQSLLLALNFSLNE
                     SSVEKLECEIEVVIRSMENLYHILQDKGINLDTDYT"
     gene            complement(16992..17327)
                     /locus_tag="MOX77_002182"
     CDS             complement(16992..17327)
                     /locus_tag="MOX77_002182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357705.1"
                     /translation="MNVTSGVNAQTPLLPPSEWGDDEKPVAEIVEFNAYGNKPRCLMC
                     LGTTALFTGAFSGVCSGAVASVSSGAAYTTALTILGASFGMGGIGMMGICAGLYLSAN
                     GVRTRPAWP"
     gene            17892..18791
                     /gene="yegS"
                     /locus_tag="MOX77_002183"
     CDS             17892..18791
                     /gene="yegS"
                     /locus_tag="MOX77_002183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid kinase YegS"
                     /protein_id="HCA3357706.1"
                     /translation="MANFPASLLILNGKSADNQPLREAITLLRDEGIQIHVRVTWEKG
                     DAQRYVDEARRLGVETVIAGGGDGTINEVSTALIQIRDGVAPALGLLPLGTANDFATS
                     AGIPEALDKALKLAIAGNAMEIDMARVNDKTCFINMATGGFGTRITTETPEKLKAALG
                     GVSYLIHGLMRMDTLTPDRCEIRGENFHWQGDALVIGIGNGRQAGGGQQLCPTALIND
                     GLLQLRIFTGEELLPALFSTLTQSDDNPNIIDGASAWFDIHAPHEITFNLDGEPLSGQ
                     EFHIEVLPGALRCRLPPDCPLLR"
     gene            complement(18844..19896)
                     /gene="fbaB"
                     /locus_tag="MOX77_002184"
     CDS             complement(18844..19896)
                     /gene="fbaB"
                     /locus_tag="MOX77_002184"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006820796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I fructose-bisphosphate aldolase"
                     /protein_id="HCA3357707.1"
                     /translation="MTDIAQLLGKDADSLLQHRCMTIPSDQLYLPGKDYVDRVMIDNN
                     RPPAVLRNMQTLYNTGRLAGTGYLSILPVDQGVEHSAGASFAANPRYFDPKNIVELAI
                     EAGCNCVASTYGVLASVSRRYAHRIPFLVKLNHNETLSYPTEYDQTLYASVEQAFNMG
                     AVAVGATIYFGSEQSRRQIEEISAAFERAHELGMVTVLWAYLRNSSFKKDGVDYHVSA
                     DLTGQANHLAATIGADIVKQKMAENNGGYKAVNFGYTDDRVYSKLTSDNPIDLVRYQL
                     ANCYMGRAGLINSGGADGGDTDLGDAVRTAVINKRAGGMGLILGRKAFKKSMADGVKL
                     INAVQDVYLDSKVTIA"
     gene            20150..21421
                     /locus_tag="MOX77_002185"
     CDS             20150..21421
                     /locus_tag="MOX77_002185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3357708.1"
                     /translation="MKTTFKLSFMMFVEWFIWGAWFVPLWLWLNKSGFSAGEIGWSYA
                     CTAIAAILSPILVGSVTDRFFSAQKVLAVLMFAGAVLMYFAAQQTTFAGFFPLLLAYS
                     LTYMPTIALTNSIAFANVPDVERDFPRIRVMGTIGWIASGLACGFLPQMLGYNDISPT
                     NIPLLITAASSALLGVFAFCLPDTPPKSTGKMDIKVMLGLDALVLLRDKNFLVFFFCS
                     FLFAMPLAFYYIFANGYLTEVGMKNATGWMTLGQFSEIFFMLALPFFTKRFGIKKVLL
                     LGLITAAIRYGFFVYGGAETYFTYALLFLGILLHGVSYDFYYVTAYIYVDKKAPVHMC
                     TAAQGLITLCCQGFGSLLGYRLGGVMMEKMFAYPQPVNGLTFNWAGMWTFGAVMIAVI
                     ALLFMIFFRESDKEITAIDDRDIALTQGEVK"
     gene            21418..22422
                     /locus_tag="MOX77_002186"
     CDS             21418..22422
                     /locus_tag="MOX77_002186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-ribosylglycohydrolase family protein"
                     /protein_id="HCA3357709.1"
                     /translation="MKAERILGALYGQALGDAMGMPSELWPRTRVKAHFGWIDRFLPG
                     PKENNAACYFNRAEFTDDTAMALCLADALLECEGNIDPEIIGRNILAWAERFDAFNKN
                     VLGPTSKIALNAIRDGKPIAALENNGVTNGAAMRVSPLGCLLPPTNLTAFIAEVALAS
                     SPTHKSDLAVAGAVVVAWAVSRAVNGDTWQSIADSLPAIAHQAQTARITTFSASLSAR
                     LELALNIVRHADGVESASEQLYQIIGAGTSTIESVPCAIAMVELANTDPNRCAVLCAN
                     LGGDTDTIGAMATAICGALHGVSAINPQLKQTLDKVNQLDFARYAVALASYRQRREAL
                     "
     gene            22419..>23208
                     /locus_tag="MOX77_002187"
     CDS             22419..>23208
                     /locus_tag="MOX77_002187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HCA3357710.1"
                     /translation="MNGARLLTLLPTLHTRRPLTVIGAAVIDIIADAWTLPRRGGDIE
                     LQQQSVNVGGCALNIAVALKRLGIDASNALPLGQGVWAERIRRRLAKEGLSSVIDAVE
                     GDNGWCLALVEPDGERTFMSFSGVENQWNADWLSQLRTPRGSLVYLSGYQLASSCGEP
                     LIQWLETVDDVTPFIDFGPRIGDITDDAMARIMACRPIVSLNRQEAIIAAERAGLATD
                     TRTFGEAWVKRFSAPLVVRHDKDGAWYFSAQSSGVVPAFPATVVD"
BASE COUNT         6303 a         5680 c         4948 g         6277 t
ORIGIN      
        1 gctggcggcg ggggatttta ccacgcgcgt gaccccaacc agcgccgatg agctgggaaa
       61 actggcgcaa gactttaacc agcttgccag cacgctggaa aaaaatcagc agatgcgccg
      121 cgactttatg gcggatattt cccacgaact gcgcacgccg ctggcggtat tgcgcggcga
      181 actggaagcc attcaggatg gcgttcgcca gttcacgcca gaatcggtta cctcgctaca
      241 ggcggaagtc ggtacgctta ccaaactggt tgacgacctg catcagctgt cgttgtctga
      301 cgagggcgcg ctggcttacc aaaaaacgac cgtcgatctt gttccccagt tggaagtcgc
      361 tggcggcgcg tttagagaac gctttaccag ccgggggcta acgctacatt acgcgttgcc
      421 ggatagtatg accgtcttcg gcgacccgga tcgcctgatg caactgttta ataatctact
      481 ggaaaacagt ctgcgctaca ccgacagcgg cggcggcctg catatttccg ccgaacaacg
      541 cgacaaatca ttattcctga cctttgccga ttctgcaccg ggcgtcagcg atgagcagtt
      601 acaaaagctt tttgaccgtt tttaccgcac ggaagtgtcc cgtaaccgcg ccagcggcgg
      661 ttctggactg gggctggcga tatgcgtcaa tattgtacac gcgcataacg gtcatcttca
      721 cgccgctcat tcgccttttg gcggggttag cattacagta gagttaccgc tggatcgcga
      781 tttacagaga gaagtatgac tgaattaccc attgatgaaa acacgccgcg cattttgatt
      841 gttgaagatg aacccaagct gggacagctg cttattgact acttacgcgc ggcgagttac
      901 gcccccacgc tcatcaatca tggcgacaag gtactgccgt atgtgcgtca aacgccgccg
      961 gatctgatcc tgctggatct gatgctgccg ggtatcgatg gtctgacgct atgccgggag
     1021 attcgccgtt tttccgacat ccccattgtg atggtcacgg ccaaaattga agagatcgac
     1081 cggctgcttg ggctggaaat cggcgccgat gattatatct gtaagcctta cagcccacgc
     1141 gaagtcgtgg cccgcgtgaa aaccattttg cgccgctgta aaccgcagcg cgaactccag
     1201 cagcaggatg ccgaaagccc gttaatgatt gatgaaagcc gctttcaggc ctcctggtgt
     1261 ggtaaagcgc tggatttaac ccccgctgaa ttccgtctgc taaaaacctt atcgcttgaa
     1321 ccgggtaaag ttttttcccg cgagcagttg ttaaaccacc tctacgacga ctaccgtgtg
     1381 gtgaccgatc gtactatcga cagccacatt aaaaacctgc gccgtaaact ggaatcgctg
     1441 gatgccgaac agtcatttat acgcgcggtc tacggggtgg gatatcgctg ggaagcggat
     1501 gcgtgtcgcc tggtataatg attattggca taacaataac aaggtcgtaa gacgatattt
     1561 tccgccaacg ctattctggc ggaattaaca cactgccctc tttcatttgg ccgagcggta
     1621 tcccgaaaac cacgacgaac gcgatcgggg acaataaatt atttggccgc tctttttagt
     1681 ttaccgatat actgtgagta gttttttaaa cttattgcgc attaattcat taagtgaatc
     1741 taaaaataca taaacataat gccagcttaa ttacacatgg atttttatga cagaaacgtc
     1801 atctcaccgc tataaaccac gcaatataat aaatgcgcca aatgtaaaat catctatttt
     1861 ttcccggagc caacaacgcg gcgatagcga aaatatccag cgctggttaa gcaatcattt
     1921 ttatcgttgg atcattggtg actttcctca cgtttaccct gtgcgctccg tcgctgatta
     1981 tgccgtttat tttagccctg atgcagaaat ccccgcctgg gtggcgatga gcgcttttac
     2041 taccttaacg ttcagcaccc gcaacttgtg gcaatggaaa gagatttagt ggaatttctt
     2101 tcgcgtcagg aaggaacgcg gctggaaact aaactacagc gcatcaactg ctttaccgtg
     2161 ctggcaatgc gcgaagcgga gcatcaaaaa atgcagcacc tgcgtgaaca aggttggtat
     2221 ccctccaaca gcgaggcgct aaaaccggtg atggcggtga ataacggtgt gctggttgag
     2281 cttgatgcaa caaaccccgg cctgcgcagt gagatggcgt atgaatcctg gcatatgcaa
     2341 cactgcgtcg gagattttga taataaaggc gcgctttccg gcggctacgg cgattactac
     2401 gcccggcaaa ttgaacaaca gaaacttcgc ctgttcagcc tgcgcgacgg caataatatt
     2461 ccccacgtca caataagcct ggtggttggt aataacggcc tgagcattga tcagattaaa
     2521 ggtaagcaaa atcgccatcc tattaagaaa tatgctaacg atgttttatc tctgttacgc
     2581 catctgcaac cacttcctga gcgccacgct gattgcgaag ggatgggaat agtttatgaa
     2641 tcgacgccgg aatattcagg ttggaaattt attactcata ttcatgacct caattttctg
     2701 ctcaatgtgc tgcatgacaa ttttcattta atggaacact tccccactcc cccggtagct
     2761 ttacagtggc tgctgctgca cagcgccccg gaggcgctgc gctaccttca ggttgttgat
     2821 cctaacgtgg cgacggctgc ggaaatgctg tttccacggc atgaatggca ccctacgctt
     2881 gccgggaaaa acaccagtag tgaacctttc gaaattgaaa gcctgacgct acaaaccacg
     2941 cgttacctcc ctgtcatcaa ggaggtgcaa taatgttctg gattgttctt attattgccg
     3001 ccctattttt tagctggcgc aactacaaaa aaaaacaaac cgctgattgc ggcccgtatc
     3061 gccgaggaga aagaaaaaga tcgtctgaag gatctgcgtc gcgatacccg acggcggcaa
     3121 tgggcgctgg cgctagctga tatcctcgcc cggcgcaacg ggctaccgat caaaggcgtt
     3181 gagctggtct tcaaacttga cgatgacaaa caccgctatc tggcacagca ggtaaaaaaa
     3241 gagctgggct tgagcgaaaa cctcaacggc gcggcgttac gccacaaggt cgaggatatc
     3301 ttacgccgct ggcctgcggg catcggcagc tcgccgagca cgttttatca tcatctggcg
     3361 gcccagggcc aggtccgcga cgcgctggct ttcgactgca tgcgaaccgc ctttctgacc
     3421 cgctgtatcg ccgggctcgg ctggtgtgac gaaaacgagg cctggctggt gttattactt
     3481 aacgcccagc gcgctcagga ctgttttgat tcctgggagg attacgccac cgcctacgtt
     3541 cgcgcccgcc gggtatggct cacgctacgt gacacgccaa tagcgcttgc cggacgggat
     3601 ttacaggaag ccacccatta tctgcaagac cctgtcagcc gctggcgaca actgccgtgg
     3661 aatgaattca aaattttcga gccgatttaa aggactattt atggaacagg atgatcgtct
     3721 gctcaacgct atgtttgaga tgtgcaacca caaaaatccc ctcaatgacg ggcaacgaga
     3781 gtggcatatc gccgatattc ccggcctgct gcgcgaagaa cgctatgacg aactggacga
     3841 acgctacaac caggcgctga cggagagctt taccagccgc gaagcggaaa agcgctattt
     3901 cttcgcctgg aatcaaatgg acaacccttt ttacgatatg gacacgctgg ttgaggctgg
     3961 gccgcaagga ttagcgctga tcaaaaactg gcagcgcgct cgtccccgct ccactcacgc
     4021 ctggcttgcc gaggcgcaat actggaatca ccgtgcgtgg ctttaccgca gctatggctg
     4081 ggcgagagaa accacccgag cgatgtggat ctgcgccgcc gcctgcaacg aacggatggt
     4141 catcgccgcg ctcaatgcta tcgactgtga accgcgccag tggatggcgg cggccctgac
     4201 cagcaccaac tcaaaagtct tcggccagcc cgactggctg gttgagttcc tcgagggcgc
     4261 ggatgttgcc gggcagccat taatggaaga tctggctgaa tatcatcgcc attcaccgca
     4321 ggaggtggat gcgctgatgg cccattccgg gctgtcgttt gccgacgcgg tttgcccaaa
     4381 tttgccgcgc ccgtccgtgc tgccggagtg caatgacgat gccgggcaaa aatactggct
     4441 cgccgtctgc ctggctattt tcccgacggc attttacgtg ctggatgaat atatcccgtt
     4501 tcgtatgccg cgctggggag ggtctcacga ggaaatccgc gaatttctgg aatcaagcgt
     4561 atgcgatcac ctttctgccg cagaacgtga acatctggag ctattgatct ggtgggacga
     4621 tcaccgcgat ctgcgcatca aagaggttga ctccccggca gaacaggaac gcattatcgc
     4681 caaagccgaa gagattagcc tgcgagcgca tatccaggaa tctcgccaca acacgctgaa
     4741 gtggctgcgg gtctgctata gcgatctgga cgataatgac gcgctctggc gaacccttca
     4801 gcgttcgatc gtggaaaaag ttaagttcaa caattacttc tttgatgaca cgataaagtt
     4861 cgccctgcgc gattttcctg acacctggtg gatgtataat tttctctgtc agaatgcgca
     4921 gcaaacggaa ttcgcagtgc cgaaaatccg tcgtggctac tttcagtacg ccgggttatt
     4981 gggtttcgaa aaggatgagg cgcaaggcct cgcctggctc gatagcgtcg ccgacattca
     5041 atataaccat aactggcggg cggcgattaa aaatttcgac tggttcgggc tcccggaaca
     5101 ttttgtgccg ctggcagagc tgggcgcaca aagaaatata cccgccgcgc taaacctgct
     5161 gggccttgaa cacaataata aagagaacaa cggcctacta ccttacgatc ctgccatcgc
     5221 gttagggtat tttcagcgcg cggcggagat tttgcaccgg cggttagcgc tgcgcgagag
     5281 caccccgtac aaattaatag ataacggagg ctataccgac tatgaaaatg acctgcaaaa
     5341 tattcatttc agcatcggca tctgcaacca gcgtctgagt aaacaagaac ttgataccga
     5401 aaaacgttcc gcttatgaaa aagaactgct cgataatctc tggctggcgc atcagttcgg
     5461 gcataaagag gcctggggct tgttcctgct gaatattttt gaagtgaagg atattacgct
     5521 ggcgcataag catctggaac tggtgcaaca agaggccaac aaaggcacgc tacacgctat
     5581 ggtgacccta tcgcgcctgc acggtaataa acacgatcga acgctgttta atatgaagct
     5641 aagcgcacgc tgggcacatt ttgccttcac gctttacccg gataatgaaa tcgttatgga
     5701 ttgcctggac cacctgcatt tcgattcttt ctggaaacgc tttcgtttcg cctggtatac
     5761 cgtccgtatc ccgaattcag agctgccggg acaggtcaac tcaatggtgt aatggagtga
     5821 taatacaaag aaaatctcta tttctttgcg ccctgcttct actcttcgcc accgccaggg
     5881 ctgaaattac ggagcagcag atcgaggccg actgcgcaaa aattccagtt ttggccagcc
     5941 agggcgaaca gctttacaag acccaaaagt atgccaaagc actcgacgct tttgaacagc
     6001 tggccgcatg gagcgaaagc tgcgcccttg acgacaacgc catcgcgacg gcctacaaca
     6061 acgtggcgct aacctggata cgcgaaggcg agtggcgtaa agcccgcgcc tggctgatgc
     6121 taaggccgaa tgatagcaag tcgatctaca acctgaaact gatcaaagat aagctatcgg
     6181 tcctgccgcc accggtttcc acggcgggtg aatactggcg ctatgccggg cgcgcctcct
     6241 ggaacgtgct tagcgtgaag gcattaccca ccccatcgcg ctatcaggtt aattttcagg
     6301 gttactggtt cggtttaatg gggatctact tcggccccaa tatcggcgag ttctacgcag
     6361 agataacgct ggaaaacgat aaagccatcg tggcgcttcg ggaaggcgat gatattcact
     6421 gtgacatttc gctggctttt tcttctgaaa ccattgatgc cagcactgat acgtttgtgg
     6481 actgcggttt tggcgcaaat gtccgcgccg acgggcacta tctgcgcgtt gaataaatct
     6541 ggcgcggaaa ctgaaatttt atgattaacc tgagatcagt tgaaattaac aatctattta
     6601 taatttccat aacgttcctc attctttcct gctatccata ttatcttaac acctccatta
     6661 caattattaa tgtcgtaagc atggtatatt taacgctcgc ttcttttttc accctgtgat
     6721 actgcatttc tggatatcaa tttgaatcga ccattttcca tttgatattg ttcctttata
     6781 taaatctgag gcgcctgatc tttaaacttt atagttacaa gatgaccatc tttgctgtcc
     6841 tcataccacc tgtatataac ataactatca atgcttattg tgtaatcctg gcggatgaca
     6901 aaatcagaaa aacgcacgat gtcttcataa gcaaaaaagc tactaagcaa taaagcatcc
     6961 accaggtttc cttttgcatc ataactattt atttgtacat taagcaataa cgtatcagac
     7021 tctccaattt tattataaat tatcaatttg taagtattac catcatgttc aaagtaccct
     7081 aattcataat aacggacacc atcaccaata tacggagaaa gaaaactctc accttttacc
     7141 ggcaccttaa tttcctgttg attaaataag ttagttttct ctttatattc atctggtaat
     7201 tttaactcca ttatattatc atcggaatta atatctttat aataacaagc caattgtgta
     7261 aactgcgtgg aatcaacagg aagaaccaat tccttactct tttgattatt acaattaaca
     7321 cttattaaaa taatgccaaa caatatggcc gaacgcagta aacataaaga aaaagttaat
     7381 ctataattat tcataatcgg cattaatatt gggttatata ttgaaagcta tataataaaa
     7441 tattgtcatc atgcattgtt gtatttttca attaaaaact catgatatga ttgctaaata
     7501 agcgtcaatt attaagatat tgatactgag aagacatgta cggtaaaata taaacagctg
     7561 catcgtgcag ttttttacat agatctttac tatcaatttg gcaatgagat gctgaataat
     7621 cccttatttt ttcaacatct tttacatcga gtatctctcc aatatgatca ataacataat
     7681 cgccaagtgc tggtttcctt ttgataagcg cagataactc attcaattct ccccatctat
     7741 ccactaacaa tctgataatt ttttctgacg tgccttcccg gaggtagccc acatcacatt
     7801 gactatgtcg ggaataaaag ccatcgacag ctttccatga cgcaagagag tctaacgcca
     7861 tatccgcttt atcaaagtct tgttgtgaac agtcttcagc ataaacatta gaaaaagaaa
     7921 aaactaaaac cataattatc cacttcatct aaagtatatt ctcatcgatt gattaattcc
     7981 atatccagtc tgctcattat gaagcatcac acagtcgtaa ttaatgaaaa acattcaccc
     8041 aatccccatc aattaatcac atgctattta accttgaatg agcgatatat ttccttataa
     8101 ttattaaata aggatgaatc gcctctacca ataaaaacaa acattatgtt tgttgacaat
     8161 actatcactg cctgaaagca ctggtctata tgatacccag catcatcttt gtacctacat
     8221 gaaacgattg cactcatgcc aataaatttt ggcgtaatat ttacatcagc taaaacaggg
     8281 acgccatcag taacggcctc ccattctcca tcatcattct ttgtaaaaaa agaattttta
     8341 ttcgttgccg catctgtgca tacataaaga taactgaaca catttatatg atttttacta
     8401 atcaataaac aatcatcttt tttattagct acccatctgg caggaatatt tatcgttgcg
     8461 tttttaaaat gaatattttt ataattttct tcaccataag tagaactaac caataatcat
     8521 cccaaaaaga ataaaataat tatcaattaa tcatctcctg aaataaaaga ccaccacttg
     8581 tcactttaat ttattctcgc caacaaaaac attagtaata catctttgcg cctcattatg
     8641 agaataatac agactaataa gctctctttt cttcttattc agatttaaat ttataaaatc
     8701 atcgccacat gatggcttta tttctttaaa gtcagccatt ttctcagaat agagaaaaac
     8761 cctatatata tcataaattc ccataccatc atctgtatac caaatcacaa aatcttcttt
     8821 accatcaaaa ttataatcac catatttaac atggatatta ttttccgtat caacatcata
     8881 atatcctctc tttgccacac gatcactacc tgtaatttca tactcaactt ttttattatc
     8941 cacccaagtg attgatgctt ttattccctt tgtaacatta aattcaacag aagtagccaa
     9001 acatataaat ggagaagaaa tcccaaaaag gattagaaaa aaatgcttca tatacttcaa
     9061 ttaacccctc cgatatcaga caggattatt aactcctctt ctacatgctg caaaagcgac
     9121 attaaacgac tcatcatcca tggtgttaaa aagctttcgt aacgtctcac taattacttt
     9181 ggatatcgtt aaaacaagaa tatgtagatg gatgcattct gtgccaatcc ccttttttat
     9241 taacttgata tccataaggc acaaacatca taccatgctc agtaactttc cgtaataatt
     9301 ccacctcata agatatttca ttataagtaa aaaagaacaa aaaatagtca tcagtaggtt
     9361 ccagtgtatc ttcattgaat ttggttctaa gatactcgtt agaaagttta ttctgcatga
     9421 aatgaaaaaa ttccttatta tccatctggc ttaattttga taactctgga aatttcttta
     9481 tcgcatcccg aattgcaaag tgtaatatta caataatccc tgcatcattt atattgttaa
     9541 ctggatgatg cttaagattt aaaagataaa aatcatctat tttaatatat tgtgatgtgc
     9601 tgagccatct actggcatca aaccatttac gtttattcgg ataatcgagg gcattttcac
     9661 tatcagaaat aacaagggtt gccatttgtt gttgtgattt atgcatatac cacccaccgc
     9721 cgaaaaatat aataataagc gtaatcacta atattactat ctttttatac atctgatata
     9781 tcttattcat ttcgggtgaa atagaataga tttgagactt aattaaacat tttatttaag
     9841 ttaatcattc tcatttctaa tgtttctttc agaaattatt ttacgtaaaa atatattcaa
     9901 ttcttttgaa tgataaaaat cgatacagtc atatataacc atgtttaccg atgccaaatc
     9961 accataagcc tgcctgggct tataaaaatc acccgtttta ttttctataa atgaagctaa
    10021 aacattatct ttatcccgat aaaaagcaag ccccatatcc aaatcgataa atcctcttgt
    10081 attatctttt aaaggtagct tagtaaaaac aacgcccatt ttttcataat ttttttcaat
    10141 acactcagca agtgaaaaat ttttatactc actaagaagt tctttagaaa tgttcttttc
    10201 tgaattcgca taacctgacg atcctcccag aaaacatagc atgaacaata atataaatct
    10261 aatcgataaa ttttataatt tttagtgtca ggcaatttat taaatgtttg agcctcatct
    10321 ccacggctat catagataat ataattacca cgccattccc caacactatt attattttta
    10381 ataataatta acgtatgatc ttcaccaaac cagacagact ctggaatatt tctttctgca
    10441 aaacaaaagc cattgggttt atagcttctc tcagcactgg cactcaaacc cgttatcaaa
    10501 cagcctttca tataaggagc gccgtaattc agcgcaaaaa tgagggagtg atggatatat
    10561 tttgagagga taatgtcccc agaatagata ctaccatcaa gaaatgcgct aacaataaca
    10621 ttgtcaaaga ttaagtatgg cgtactacca tcaacagtgc tcaatgaaat taatttaact
    10681 ctattacctt cctccaactt acaatctttt atatttttaa tatccatagg taagcaataa
    10741 cagggaaaaa acatcaaaaa aagcataact atttttaaca tcaatcagac cttacaacaa
    10801 ttgtaaattt attgtcttat ttctatcaaa cataaataac ctatcatcag gctattaatc
    10861 acaacattca aatgcctgtc tcaatgcact tccaattttc tctggttcgc tggtaacagg
    10921 caatctaatt acatctttgt catgtccggc ccagctccac ccttcaagtt tagtatgtcg
    10981 agtaggttgt atcttaataa tattattcac gcatataatt gagcaatact tcatgttttt
    11041 aaataatgca cgcctggttc tataattata ttttgccatc aatacagtga cccactcatc
    11101 atactccacc tgtgttttct ctaaagaaag atactcttca ctctcttctg gggtgtaagt
    11161 tctgctattt tttaatgctt gtaataattc atgaccgata catacatcat ccgaatcaat
    11221 agataataac tgacaagggt aatcaggatc tgaagaatag cgccccaatc ccgaataagt
    11281 ttctaaacat aaaaacttat ctgtcaggtt agcacccgcg tgatactctt tatttacatc
    11341 aaatataaat gtcattttcc tgctcctgta aaaactacag tcacaccttt cgttgaacca
    11401 tagtcaatag ctcgctgtac ttgttccatt tgctcggggg taacaccaga gaatattcac
    11461 caattactca acaatttata tcatttcatt tgctataact tttgtttatt ttttcaattt
    11521 taaaatcttt ttttgaaatt atataaataa tttgctccat accgccacca cgggcttctt
    11581 ccagatgaga tttacaatag aatgcgattt taatattttc atcatcatcc tgtatcatgg
    11641 tattaaataa gccccagttt gtatgctctc taaaatgtga aaaagcaaca ttcatagttt
    11701 ttgtttgtac ttcatctaaa aaaacaagtt tttcactcat acatcttaac ggaattagaa
    11761 aaataaatgc aaaaataata tatttcattt cattccctca gttttttcca gttccagggg
    11821 taaacttata atatttatta tctggagtcc ccaaaaagcc agtataatca ggattaccta
    11881 taccatcact tgcaatccca gaaatatctt gcggtgaaaa atgtaaagag tcatatgcct
    11941 catattgagg taatactgga ttccccttta gatcagagta aaagccatgt gtatgataat
    12001 caccaacctt agtcgagcca aaaggacaag agctatttga cggagaaaaa ccaaccaagc
    12061 ttcactactt agcttcagtt gcaatacatt tattactata ggtttacaga ctaacccgcc
    12121 atattctcta ttctttataa ttgatgtgct attacacatt tttatggcaa aaagcgcata
    12181 tagtgtgatt tatttatctt taaaatatgc atatctgcaa gacaaaaatt cacaaaaaag
    12241 cacagaacaa aagacaatat tgttttcttc atatactccc ctaaccttca gtcctaccaa
    12301 ttactgcaca aaccatcagc aaaagagaat ccgtgaattt gtactcgatt ttacattgtt
    12361 gtcgatactc agtaattatt gatatataat tcagcaaatt tgacaaattc gtttcagaat
    12421 gaccttgctt ttatgtgaac ttcattcatt tttcaaaccg tctcatataa tgttttcatg
    12481 caaattttct tgtcatacac attgaaaaca tataacaaaa atatgttcac gacatatcca
    12541 tttaatattt tataccatca ttaacttcat cgtcataatt tatggaatat agaattattt
    12601 tagtgtaata cgcttgagtg gcaaccactc accaggctga gaatatgaaa acatttttcc
    12661 ttttatataa tactcttttc ctttattgct tatctcaaat tgcggtgatg gatatggaca
    12721 tgcattttcc tcgtcgccgt tatagtataa taccaaaaca ccagaattga tttttaaaga
    12781 gtagtcacca atgcatgtta tccccgcatg ccaagttgtc atggataaag aagcacgatt
    12841 atttttacta tctatcttta aattatattg taaaaaaacc tgactcctat catttaactg
    12901 ctcgccaagt tcctcgactc taaagttacc atcccattga gtttgagtaa tcgcaaaaga
    12961 atttgcgctc cataagcaag gaaaaataaa tagatatttt ataaaatcgc ccatacaact
    13021 accccctgat ttaatatgta gaaggtatca attcagtatt cagcattgtc acactataca
    13081 caaaatcact caagttgcat caaggcggca aggatttgct attgcgcaat gcgtaaaaaa
    13141 catcaagaaa aatatatttt tcataataaa atctactaat aagtagattc aatggattcc
    13201 atcttatcaa tacgtattta tcattttctg ttcaacctca acctgatttc ctcttagtac
    13261 tgagtatcgt ctgcgatcgt taattctacc tctgatgata cctcgttaaa aaataacgct
    13321 accgccatac cctggtttac aaacctgcac accctaagat tactctctta tctgcattaa
    13381 gaatatcatt gtgttttttt tcggaatata taaagattcc ccatagtgga tacataacgt
    13441 gacccgaatt agttaaagac gggatcgctg acgctataat aagtcaaatg accttttgta
    13501 ttttctttaa tgcatgttgc cgaggtgatt tcacctttat tttttagtga attagtttca
    13561 tattcaggaa atgctttatt taaattctga atattgaggg ggtgccataa catcctgata
    13621 gcagaaagat ataaataagc agccatttac cctgattaaa catatatgcc tcacgcacta
    13681 caatcttccg tgaccaaatc cagcagcgtt aaactccacc ctttgcccaa gccatgaagc
    13741 tcgctcagat gaaaaatcaa accatcaccc cattctttcg gcactgccac cactcgctct
    13801 gattgcagct caagccgcct ggcgtttgct atacgggtat ccgacgcctg atccccacta
    13861 tccgctccat tcaccatgct aaacgtcagc agcgcattat cagaaccggt atagctgaca
    13921 aaaaaaccgg cgtgatccca tcccttttca caaacgtact caacctccgt gtggtgatca
    13981 aattccttat ccacaggaat atgctctgaa aaccaaccta cctgccccaa caggtagtta
    14041 aagtcaggta tcggtttatt aatatcaaat tttttcatcc atttataatc aaacccagcc
    14101 ccaattcggt acagcacata catcccgact tttttatcaa tcagggcatt aattttcgcg
    14161 ttgtctcgct gctgaaaagc gataatcacc tgtctcgccg tctcttcaaa cgacggagcg
    14221 gcacaaacgg gatgcgcggc cattcccagc aaactcagcg cgatggccgt gcggctcatt
    14281 ttcatcattg gctccccatt aacatccggt gttctattag cgccaatata ctctcgcaat
    14341 atttactcgg cctgtccgta agcgtacaat gcccgccctt aaagtgagga ctctcttcca
    14401 gccgcctcat caggtgaggc ggatctgacc tgtcatcaga acgagaaaat gatgtttaaa
    14461 ccagaactcc tttcgccagc gggaacgctg aaaaatatgc gttacgcttt cgcttacggt
    14521 gccgatgccg tctatgcggg ccaaccgcgt tactctttac gcgtgcgcaa taacgaattc
    14581 aatcacgaaa atttgcagct tggcatcaac gaagcccacg cgctcggaaa aaaattctac
    14641 gtggtggtga acatcgcccc gcataacgcc aagctcaaaa cctttatccg tgacctgaaa
    14701 cccgtcgtcg agatgggccc ggatgcgctg atcatgtccg atccagggtt gattatgctg
    14761 gtacgcgagc acttcccggc aatgccgatt cacctgtcgg tacaggctaa cgccgtaaac
    14821 tgggcgacgg taaaattctg gcagcagatg gggctgaccc gcgtgattct ctcccgcgag
    14881 ctgtcgctgg aagagattga ggaaattcgc cagcaggtgc cggatatgga aatagaaatt
    14941 ttcgtccacg gcgcgctatg catggcctat tccggtcgct gcctgctttc cggctacatc
    15001 aataaacgcg atccgaacca gggcacctgc accaatgcct gccgttggga atataacgtg
    15061 caggaaggaa aagaagacgt tgtcggcaac atcgtgcata agcatgaacc gattccggta
    15121 cagaacgttg agccgacgct cggtatcggc gcgccgacgg ataaagtgtt tatgatagaa
    15181 gaggcccaaa gaccgggcga atacatgacc gcgttcgaag acgagcatgg cacctatatc
    15241 atgaactcaa aagatttgcg cgctatcgcc cacgtggagc gcctgacgaa aatgggcgtc
    15301 cactcgctga aaatcgaagg ccgcaccaaa tccttttatt actgcgcccg taccgcccag
    15361 gtctaccgta aggccatcga cgacgccgcc gcgggtaaac ccttcgaccc tacgctgctg
    15421 gaaacgctgg aaggtctggc tcatcgcggc tataccgaag gtttcctgcg tcgccatacg
    15481 cacgacgatt accagaatta cgagtacggg tactccgttt ccgaacgcca gcaatttgtc
    15541 ggcgagttca ccggcgagcg taaaggccaa ctggcggccg tggcggtgaa gaataaattc
    15601 tccgttggcg atagtctgga gctgatgact ccgcagggaa atatcaattt cactctggaa
    15661 cagatggaga acgccaaagg cgacgctatg ccggtggcgc ctggcgatgg ctataccgtc
    15721 tggatgcccg tcccgcagga cgttacgctg gattacgcac tattgatgcg taatttctca
    15781 ggcgaatcaa cgcgtaaccc ccatgctaag tagttaattg cggttatttt ttcatggcgg
    15841 gaagattctt agaaattgat cacataccgc ttcgctcaat gcgggtatta ttcaacgcgc
    15901 tgaaaaacat aacccataaa tgctagctgt accaggaacc acctccttgg cctgcgtaat
    15961 ctcccttacg caggcttatt ttttgcgtat aatcaataaa aaagtggtac ttcccgccac
    16021 atccgaaaat tgaccacact aaccaaagcg caaatgggcg cttaggttta gagacctccc
    16081 ctattcatgg ccagccagca agtcacaatc ctccctgcat ctggtcagac tcaggactta
    16141 gcattctgac gtttacgttt aaaatcagtg aattaaatca ataactgctt tgtgagtact
    16201 tacacaaaaa gtttccaggt tattaaatta aggttaaaaa ctgataattt aagcgtgtaa
    16261 agttatggca cgttttaatg ccgcttttac aaggattaaa ataatgtttt cccggattag
    16321 aggtttgatt tcatgtcaaa gtaatactca aaccatcgca cctacgctca gtccatcttc
    16381 atcaggccat gtaagttttg ctggggttga ttatcctcta ttaccaccag atcaccaaac
    16441 acccttccca ccgtcacgta taatcggtat ccagatttat tcctttatcc tgtaaaatgt
    16501 gatacagatt ctccattgat ctaataacca cctcaatttc acattcaagt ttctctacag
    16561 aactttcatt gagtgagaaa tttagagcca gtaataatga ttgtgagtta ttatcataac
    16621 acaaatgtgg tccattattc tctgcaaacc ataaattaga attgagaaat tcaaaagcaa
    16681 gattattatt atccggaggt cttccgcaaa aaccgtatat cattatatac tcactgttag
    16741 tgcttgttag taagatacgg taacggttat ctataataaa tgagcataat ctgttttcgt
    16801 caaaggcaat tgaatcggca tttaatttca gtgaaaactg tcttaataag cgatcggctc
    16861 ttgaatacat aacaccccat actctatcta aagcgtttct atataagtca taagcctctg
    16921 gtctggacgc ttaacacccc gtgtcatctc cggaattcat cttttcccta tgacttgctg
    16981 tgtttgctca tttatggcca ggctggccgg gttctgacgc catttgcgct aaggtatagt
    17041 ccggcgcata ttcccatcat accaattccc cccatgccaa acgatgcgcc taaaatcgtc
    17101 agagcggtag tatatgcagc accactactg acactggcga cagcccctga gcatacccca
    17161 ctgaaagcac ctgtaaacaa tgccgtggtt cccaggcaca ttaaacatct gggtttattg
    17221 ccgtaagcgt taaactcaac gatttcagct accggttttt cgtcatcacc ccattcagaa
    17281 ggggggagca atggcgtttg cgcattcacg cctgaagtga cattcatata aacctcttca
    17341 tgcacatgcc tgtttatgtt tatgagaaaa gcgatacctc aggcaacggt acgactataa
    17401 gacactgcgc taagtcatca tctaaatagg ttttatttga taacaagaat agtgtactgc
    17461 taatagtgcg tcttgttcct gccaaagcag tctaaagaac atttcgattt tatgctatta
    17521 aaaagtatgt ttggtaataa atatcaggtt tttatctgat attgtggtgt ttgaaattaa
    17581 tactgataac tgacgtatgt tcgtcttgtt aatcctccgt ttcgttatta aaggcgctat
    17641 atcggaaagc gtctggctac cccttgtggt ttccttgcac tctcacaagc gctactcaat
    17701 gcgcataccg gcatctctct tgtcgccatt tgccttaaac catgcttcgc ttaccgctgc
    17761 gtacagcagg aagaaaaacg gtaaagcaat aagtgcgcaa cgtttcaatt ttcatcctgt
    17821 tctgacctcg ctttttcatt tctgctatac actttctgga gattgttgtt caacctatta
    17881 aggcataacg gatagctaac tttcccgcca gcttactgat cctcaatggc aaaagcgctg
    17941 ataaccagcc gctacgtgag gccattacgc tacttcgcga cgaaggcata cagattcacg
    18001 ttcgggtaac ctgggaaaaa ggcgacgcgc agcgttacgt tgatgaagcc cgtagactgg
    18061 gcgttgaaac ggtgattgcc ggcggcggag acggtaccat taatgaagtg tctaccgcgc
    18121 tcatccagat ccgcgacggc gtagcccccg cactgggcct tttgccgctc ggcaccgcca
    18181 acgattttgc caccagcgcc ggtattcctg aagcgctgga caaagcgctg aaactggcga
    18241 ttgccggaaa cgcgatggaa attgatatgg ccagggtcaa tgataaaacc tgttttatca
    18301 atatggcgac gggcggtttt ggcacccgca ttaccaccga aacgccggaa aaacttaaag
    18361 ccgcgttggg cggcgtctcc tatcttattc acggtctgat gagaatggat acgctgaccc
    18421 ctgaccgctg cgaaatacgt ggcgaaaact ttcactggca gggagatgcg ctggtgatcg
    18481 gcatcggcaa cggtcgtcag gccggcggcg ggcagcaatt atgtcccacc gcgctgatta
    18541 acgacggact gttacagcta cggattttta ccggcgaaga actgctgccg gcgctgtttt
    18601 ccacactcac gcagtcagat gacaatccga atattattga cggcgcctca gcgtggtttg
    18661 atattcatgc accgcatgaa atcacgttca atctggatgg cgaaccactc agcgggcaag
    18721 aatttcatat tgaggtgctg cctggcgcat tacgctgtcg gctgccgcca gactgcccgt
    18781 tgctacgtta ataacaccag tcgctggccg gatgcgctca catccggctt ttcttcgttg
    18841 aactcaggcg atggtgactt tgctatccag atagacatcc tgtacggcat taatcaactt
    18901 cacgccatca gccatcgatt tcttaaaggc tttacgtccc agaattagtc ccattccacc
    18961 ggctcgtttg ttgatcaccg cggtacgaac cgcgtcgccg agatcagtgt caccgccgtc
    19021 cgcgccgccg gagttgataa gcccggcgcg tcccatatag cagttcgcca actggtaacg
    19081 aaccaaatca atcgggttat cgctggtcag tttgctgtac acgcgatcgt cggtatagcc
    19141 gaagttgacc gctttataac cgccattatt ctcggccatt ttctgtttca caatatccgc
    19201 accaatcgta gcggccagat ggttggcttg ccccgtcagg tcagcggata catggtaatc
    19261 gacgccgtct tttttaaagg aagaattacg caggtaagcc cacaatacgg tcaccatacc
    19321 cagctcatgc gcacgctcaa aagcggcgga gatctcttca atctggcgac gggactgttc
    19381 cgaaccgaaa tagatcgtcg cgcctaccgc cacggcgccc atattgaacg cctgctcaac
    19441 gctggcgtac agggtctgat cgtactctgt cggatagctc aatgtttcgt tgtgattcag
    19501 tttgaccaaa aacggaatac ggtgcgcata gcgccgtgaa accgaggcca gtacgccgta
    19561 ggtagaggcc acgcagttac agccggcctc aatcgccaat tcaacaatat tttttgggtc
    19621 aaagtagcgc gggttggccg caaaagaagc gccggcggag tgctccactc cctgatcgac
    19681 gggcagtatc gaaaggtatc ctgttcccgc caggcgtcca gtattataga gcgtctgcat
    19741 attacgcaga acggctggtg gacgattatt gtcaatcatc acccggtcaa cgtaatcctt
    19801 gccgggtaga taaagctgat cggaaggaat ggtcatacaa cgatgctgta aaaggctgtc
    19861 ggcgtctttg ccaagcaact gcgcaatatc agtcatagct atgctcccgt aagttccgat
    19921 agggtatcgg aaggtgaata gtcctgcccc gcagattgcg ggtcgcaata agcctggtac
    19981 tgaccgacca tttttgccaa ctttagcgca ttttttcggc gctatctgct gactcgattc
    20041 acgtccgaaa aagtgttaga tcggtcaaaa ttaatgctca atggtattta aaaggtatta
    20101 ttaagtggta ttgtcgtggc gtaccttacc tgtcatgaag gattcaaaaa tgaaaacgac
    20161 ctttaaactg tcgttcatga tgttcgtgga gtggtttatc tggggcgcct ggttcgtccc
    20221 cctgtggcta tggctaaata aaagcgggtt ttccgccggt gaaataggct ggtcttatgc
    20281 ctgtaccgcc attgcggcga tcctgtcgcc gattctggtc ggctccgtta ccgaccgttt
    20341 tttctcagcg caaaaagtcc tggcggtact gatgtttgcg ggtgccgtac tgatgtattt
    20401 cgcggcacag caaaccacct ttgccggatt ctttccgctg ctcctggcct attcattgac
    20461 ctatatgccg accatcgcgc tgacaaacag cattgccttc gctaacgtac cggacgttga
    20521 acgcgatttt ccacgcattc gcgttatggg aaccattggg tggattgcct ccggcctcgc
    20581 ctgtggattc ttgccgcaaa tgttaggcta taacgatatt tcccccacca acattccact
    20641 gctcataacc gccgcaagtt cagcgttgct gggcgtattt gcgttctgtc tgccagacac
    20701 gccgccaaaa agcaccggca agatggatat taaagtgatg ctggggctgg atgcgctggt
    20761 tctgctgcgc gataaaaact ttctcgtttt cttcttctgt tccttcctgt ttgcgatgcc
    20821 gctggccttc tactacatct tcgctaacgg ctatctgaca gaagtgggaa tgaaaaacgc
    20881 caccggctgg atgacgctcg gccagttctc tgaaatcttc tttatgctgg cgctaccctt
    20941 tttcactaag cgctttggta ttaaaaaggt attattactt ggtcttatta ccgccgcgat
    21001 ccgctacggc ttttttgtct atggcggcgc ggagacgtac ttcacttacg ccctgctgtt
    21061 cctcggtatt ttgctgcacg gcgtaagtta cgatttctac tacgtcaccg cctacattta
    21121 tgtcgataaa aaagcgccgg ttcatatgtg taccgctgcg caagggctta tcaccctctg
    21181 ctgtcaggga ttcggcagcc tgctgggcta tcgtctcggc ggcgtgatga tggaaaaaat
    21241 gtttgcttat ccgcaaccgg ttaacggtct gacattcaac tgggcgggca tgtggacgtt
    21301 tggcgcagtg atgattgccg tcatcgcgct actgtttatg attttctttc gcgaatcgga
    21361 caaagagatc actgctattg acgatcgcga tattgcgttg acacaagggg aagtaaaatg
    21421 aaagcagaac gtattctcgg tgctctttac gggcaagcgt taggggatgc gatgggaatg
    21481 ccctctgagc tgtggccgag aacgcgcgtc aaagcgcatt tcggctggat tgaccgcttt
    21541 ctgcccggcc caaaagaaaa taatgccgcc tgctatttta accgcgcgga gtttacggac
    21601 gataccgcaa tggcgctctg cctggccgac gcgctactcg aatgcgaagg caacattgat
    21661 cccgagatta ttgggcgtaa catcctcgcc tgggcggaac gctttgatgc gttcaataaa
    21721 aatgtactcg gcccgacgtc aaaaattgcg ctgaatgcga ttcgcgacgg caaacccatc
    21781 gcggcgctgg aaaataacgg cgtgactaac ggcgcggcca tgcgcgtttc gccgttgggc
    21841 tgcctgttgc cgccaactaa cctgacagcc tttatagcag aagtagcgtt agcctccagc
    21901 ccgacgcata aatccgatct ggcggtggct ggcgccgtgg ttgtcgcctg ggccgtctcg
    21961 cgagcggtta acggcgacac gtggcaaagt attgccgact cgctccccgc catcgcccat
    22021 caggcgcaga cagcgcgtat taccacgttt agcgcctcgc tatcggcacg tctggaactg
    22081 gcgctaaaca ttgtccgcca cgccgacggc gtcgaatctg ccagcgaaca gctctatcag
    22141 atcatcggcg cgggaaccag caccattgaa tcggttccct gcgctatcgc catggtggag
    22201 ctggcgaata ccgatcctaa ccgctgtgcc gtgctgtgcg ctaacctcgg cggcgatacc
    22261 gacactatcg gcgcgatggc taccgccatt tgcggcgcgt tgcacggggt aagcgccatt
    22321 aacccccagt taaagcaaac gctggacaag gttaatcagc tggattttgc gcgctatgcc
    22381 gttgcgctgg cgagctatcg tcaacggcgg gaggcactat gaacggcgca cggttgctga
    22441 cattattacc gaccctgcat acccggcgtc cgctcaccgt tatcggcgcg gcagtgatcg
    22501 atatcattgc cgacgcctgg acgttgccgc gtcgcggagg cgatattgaa ctgcaacaac
    22561 agagcgtcaa tgtcggcggc tgtgcgctga atattgccgt ggcgttgaaa cgactgggga
    22621 ttgacgccag caatgcgctg ccgctgggcc agggcgtgtg ggcggagagg attcgccgcc
    22681 gtctggcaaa agagggatta tccagcgtga ttgacgcggt tgaaggagat aacggctggt
    22741 gtctggcgtt agtcgaaccg gatggcgaac gcacgtttat gtcttttagc ggcgtggaaa
    22801 accagtggaa tgcggactgg ctgtcgcagc tcaggacacc gcggggcagt cttgtctacc
    22861 tgtccggcta tcaactggcc tcgtcctgtg gcgagccact gatccagtgg ctggaaaccg
    22921 tcgacgatgt aacgcctttt atcgattttg gcccgcgaat cggtgatatt acagacgatg
    22981 caatggcgcg cattatggcc tgccggccca tcgtatccct caatcgccag gaagccatca
    23041 tcgccgcgga acgcgccggg cttgcgaccg atacccgcac tttcggcgaa gcatgggtaa
    23101 aacgcttttc cgcgccgctg gtggtgcgcc acgataaaga cggagcgtgg tattttagcg
    23161 cgcaatcttc cggcgttgtg ccagcgtttc cggcaaccgt ggtggata
//
LOCUS       DAGWFR010000055        22791 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.056, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000055 DAGWFR010000000
VERSION     DAGWFR010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 22791)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22791)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22791
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.056"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..3359)
                     /gene="mscK"
                     /locus_tag="MOX77_002188"
     CDS             complement(<1..3359)
                     /gene="mscK"
                     /locus_tag="MOX77_002188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive channel MscK"
                     /protein_id="HCA3357711.1"
                     /translation="MTMLQLYKRSQHFVFITISVLIILLSCQSLAFARGQTNGDLPSK
                     ADVQNQLDTLNKQKDLSAQDKLVQQDLIDTLATLEKIERVKEETVQLRQKVAQAPEKM
                     RQATAALNALSDVDNDDEMRKTLSALSLRQLELRVAQVLDDLQNSQNDLAAYNSQLVS
                     LQTQPERVQNAMYTASQQIQQIRNRLDGNNVGEAALRPSQQVLLQAQQALLNAQIDQQ
                     RKSLEGNTVLQDTLQKQRDYVTANSNRLEHQLQLLQEAVNSKRLTLTEKTAQEAISPD
                     ETARIQANPLVKQELDINHQLSQRLIVATENGNMLMQQNIKVKNWLDRALQSERNIKE
                     QIAVLKGSLLLSRILYQQQQTLPSADELEDMTNRIADLRLEQFEINQQRDALFQSDAF
                     VDKLEEGHTSEVNDEVHDALLQVVEMRRELLDQLNKQLGNQLMMAINLQVNQQQLMSV
                     SKNLKAILTQQIFWVNSNRPMDWDWLKAFPQTLKEQFSAMKITVNWQKAWPAVFIAFL
                     AGLPLLLIAGLIRWRLKWLKAYQQKLAAAVGSLRNDSQLNTPKAILIDLIRALPVCLI
                     ILAIGLILLTMQLNISDLLWAFSEKLAMFWLVFGLCWKVLEKEGVAIRHFGMPAQLTS
                     HWRRQIVRISLALLPLHFWSVVAELSPLNLMDDVLGQAVIFLNLLVITLLVWPLCRES
                     WRDKESHGIRLVTVTILSIIPVALMVLTATGYFYTTLRLAGRWIETVYLVIIWNLLYQ
                     TVLRGLSVAARRIAWRRALARRQNLVKEGAEGAEPQEEPTIALEQINQQTLRITMLLM
                     LALFGVMFWAIWSDLITVFSYLDSITLWHYNGSEAGAAVVKSVTMGSLLFAIIAAMVA
                     WALIRNLPGLLEVLVLSRLNMRQGASYAITTILNYVIIAVGAMTVFGSLGVSWDKLQW
                     LAAALSVGLGFGLQEIFGNFVSGLIILFERPVRIGDTVTIGTYSGTVSKIRIRATTIT
                     DFDRKEVIIPNKAFVTERLINWSLSDTTTRLVIRLGVAYGSDLEKVKRVLLQAAMEHP
                     KVMHDPEPAVFFTTFGASTLDHELRLYVRELRDRSHTVDELNRAIDRLCRENDINIAF
                     NQLEVHLHNAKGDEVTEVKRDLNGGDLAPAA"
     gene            complement(3478..4131)
                     /gene="acrR"
                     /locus_tag="MOX77_002189"
     CDS             complement(3478..4131)
                     /gene="acrR"
                     /locus_tag="MOX77_002189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter transcriptional
                     repressor AcrR"
                     /protein_id="HCA3357712.1"
                     /translation="MARKTKQQALETRQHILDVALRLFSQQGVSATSLAEIANAAGVT
                     RGAIYWHFKNKSDLFSEIWELSESNIGELEIEYQAKFPDDPLSVLREILVHILEATVT
                     EERRRLLMEIIFHKCEFVGEMVVVQQAQRSLCLESYDRIEQTLKHCINAKMLPENLLT
                     RRAAILMRSFISGLMENWLFAPQSFDLKKEARAYVTILLEMYQLCPTLRASTVNGSP"
     gene            4273..5466
                     /gene="acrA"
                     /locus_tag="MOX77_002190"
     CDS             4273..5466
                     /gene="acrA"
                     /locus_tag="MOX77_002190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit AcrA"
                     /protein_id="HCA3357713.1"
                     /translation="MNKNRGLTPLAVVLMLSGSLALTGCDDKQDQQGGQQMPEVGVVT
                     LKTEPLQITTELPGRTVAYRIAEVRPQVSGIILKRNFVEGSDIEAGVSLYQIDPATYQ
                     ATYDSAKGDLAKAQAAANIAELTVKRYQKLLGTQYISKQEYDQALADAQQATAAVVAA
                     KAAVETARINLAYTKVTSPISGRIGKSSVTEGALVQNGQASALATVQQLDPIYVDVTQ
                     SSNDFLRLKQELANGSLKQENGKAKVDLVTSDGIKFPQSGTLEFSDVTVDQSTGSITL
                     RAIFPNPDHTLLPGMFVRARLQEGTKPTALLVPQQGVTRTPRGDATVLVVGADNKVET
                     RQIVASQAIGDKWLVTDGLKAGDRVVVSGLQKVRPGAQVKVQEITADNKQQAASGDQP
                     AQPRS"
     gene            5489..8638
                     /locus_tag="MOX77_002191"
     CDS             5489..8638
                     /locus_tag="MOX77_002191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit"
                     /protein_id="HCA3357714.1"
                     /translation="MPNFFIDRPIFAWVIAIIIMLAGGLAILKLPVAQYPTIAPPAVT
                     ISATYPGADAKTVQDTVTQVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFESGTDADI
                     AQVQVQNKLQLAMPLLPQEVQQQGVSVEKSSSSFLMVVGVINTDGTMTQEDISDYVAA
                     NMKDPISRTSGVGDVQLFGSQYAMRIWMNPTELTKYQLTPVDVINAIKAQNAQVAAGQ
                     LGGTPPVKGQQLNASIIAQTRLTSTDEFGKILLKVNQDGSQVRLRDVAKIELGGENYD
                     VIAKFNGQPASGLGIKLATGANALDTATAIRAELKKMEPFFPPGMKIVYPYDTTPFVK
                     ISIHEVVKTLVEAIILVFLVMYLFLQNFRATLIPTIAVPVVLLGTFAVLAAFGFSINT
                     LTMFGMVLAIGLLVDDAIVVVENVERVMTEEGLPPKEATRKSMGQIQGALVGIAMVLS
                     AVFIPMAFFGGSTGAIYRQFSITIVSAMALSVLVALILTPALCATMLKPVAKGDHGEG
                     KKGFFGWFNRLFDKSTHHYTDSVGNILRSTGRYLLLYLIIVVGMAYLFVRLPSSFLPD
                     EDQGVFLTMVQLPAGATQERTQKVLDEVTDYYLNKEKANVESVFAVNGFGFAGRGQNT
                     GIAFVSLKDWADRPGEKNKVEAITQRATAAFSQIKDAMVFAFNLPAIVELGTATGFDF
                     ELIDQAGLGHEKLTQARNQLFGEVAKYPDLLVGVRPNGLEDTPQFKIDIDQEKAQALG
                     VSISDINTTLGAAWGGSYVNDFIDRGRVKKVYVMSEAKYRMLPDDINDWYVRGSDGQM
                     VPFSAFSSSRWEYGSPRLERYNGLPSMEILGQAAPGKSTGEAMAMMEELASKLPSGIG
                     YDWTGMSYQERLSGNQAPALYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALL
                     AATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLVEAMLEAVRMRL
                     RPILMTSLAFMLGVMPLVISSGAGSGAQNAVGTGVLGGMVTATVLAIFFVPVFFVVVR
                     RRFSRKSEDIEHSHSTEHR"
     gene            9134..9508
                     /gene="tomB"
                     /locus_tag="MOX77_002192"
     CDS             9134..9508
                     /gene="tomB"
                     /locus_tag="MOX77_002192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001741190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hha toxicity modulator TomB"
                     /protein_id="HCA3357715.1"
                     /translation="MDEYSPKRHDIAQLKFLCETLYHDCLANLEESNHGWVNDPTSAV
                     NLQLNELIEHIATFALNYKIKYNEDNKLIAQIDEYLDDTFMLFSSYGINTQDLQKWRK
                     SGNRLFRCFVNATRANPVSLSC"
     gene            9536..9754
                     /gene="hha"
                     /locus_tag="MOX77_002193"
     CDS             9536..9754
                     /gene="hha"
                     /locus_tag="MOX77_002193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin expression modulator Hha"
                     /protein_id="HCA3357716.1"
                     /translation="MSDKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDNELAVFY
                     SAADHRLAELTMNKLYDKIPSSVWKFIR"
     gene            9933..10484
                     /gene="maa"
                     /locus_tag="MOX77_002194"
     CDS             9933..10484
                     /gene="maa"
                     /locus_tag="MOX77_002194"
                     /EC_number="2.3.1.79"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose O-acetyltransferase"
                     /protein_id="HCA3357717.1"
                     /translation="MSDEKQKMIAGALYCPTDETLCQDRLRARQLIHQYNYTTPDEIN
                     KRQAILRDLLGRCEDAYIEPSFRCDYGYNIFLGHSFYANFDCVMLDVCPIHIGDNCML
                     APGVHIYTATHPLDAVERNSGRELGKPVTIGNNVWIGGRAVVNPGVTIGDNVVVASGA
                     VVTKNVPPDVVVGGNPARIIKKL"
     gene            10602..11072
                     /locus_tag="MOX77_002195"
     CDS             10602..11072
                     /locus_tag="MOX77_002195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357718.1"
                     /translation="MTEIQRLLSETIDDLNVREKRDNRPRFSISFIRKHPGLFIAMYA
                     AWFATLAVMLQSETLVGSVWLLVVLFIAFNGFFFFDIAPRYHYNDIDVLDLRVCYNGE
                     WYNTRFVPPTLIETILQSPQVDNEHKVQLQKMVARKGELSFYDIFTLARAEASR"
     gene            complement(11128..11268)
                     /gene="ykgO"
                     /locus_tag="MOX77_002196"
     CDS             complement(11128..11268)
                     /gene="ykgO"
                     /locus_tag="MOX77_002196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L36"
                     /protein_id="HCA3357719.1"
                     /translation="MQVLNSLRNAKQRHPDCQIVKRKGRLYVICKTNPRFKAVQGRKK
                     RR"
     gene            complement(11274..11534)
                     /locus_tag="MOX77_002197"
     CDS             complement(11274..11534)
                     /locus_tag="MOX77_002197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L31"
                     /protein_id="HCA3357720.1"
                     /translation="MKPDIHPVYRTVVFHDTSANEYVKVGSTIKTEREIELDGVTYPY
                     VTIDVSSKSHPFYTGRQKTFDSESSAARFQKRFGHFIGAKRG"
     gene            11759..13309
                     /locus_tag="MOX77_002198"
     CDS             11759..13309
                     /locus_tag="MOX77_002198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HCA3357721.1"
                     /translation="MTTRHLVSLVTGVLILSVLFPIGLSLWLAHRQVEKRFNEELDIF
                     SSRVALRTERVSDQAKAALTHIASFKGEPCSSAHLLAMRRVSYSFRYVQEVLYLKNSI
                     PVCSSLEKESHIPAFPPPMKITRDGYRAWFTAQNDLGIKRYMAALGSDSYIVMIDPAS
                     FIDVIPFGAWPIDVAIIGRERNTVVASSGNLDHAILPLIHHETPLRLENRGIQYAIHP
                     FPEMGITIVSWAPTAPLERSWYRQAFIWLPAGIVTGLLAAAFILRILRRLQSPRHRLQ
                     DAIDNREINVHYQPIVSLSSGKIVGAEALARWQQADGTFLSPEIFIALAEQTGLTEPL
                     TRLIIDTVFEDMGSWLKSHPEQHISINLEASDLASETLPTLLSTLLNRSQISPSQIAL
                     ELTEREFADPKTSAPIVARYRNAGHSIYIDDFGTGYSSLSYLQNLDVDVLKIDKSFVD
                     ALEYKNVTPHIIEMAKTLKLKMVAEGIETTRQEQWLRQHGVHYGQGWLYSKPLPATAF
                     ILWVEQRL"
     gene            complement(13359..13455)
                     /gene="ffs"
                     /locus_tag="MOX77_002199"
     ncRNA           complement(13359..13455)
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="MOX77_002199"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            13540..13929
                     /locus_tag="MOX77_002200"
     CDS             13540..13929
                     /locus_tag="MOX77_002200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MGMT family protein"
                     /protein_id="HCA3357722.1"
                     /translation="MLVSCASGLSSPLIPDYPEALTQDSIMDIQDTFPQRVWQIVASI
                     PEGFVTTYGDVARLAGSPRAARQVGGVLKRLPEGSTLPWHRVVNRHGAISLTGPDLQR
                     QRQALLAEGVVVSGSGQIDLQRYRWVY"
     gene            complement(13962..14531)
                     /locus_tag="MOX77_002201"
     CDS             complement(13962..14531)
                     /locus_tag="MOX77_002201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaY family lipoprotein"
                     /protein_id="HCA3357723.1"
                     /translation="MKLVHIVSGLAVAISLAACADKSADIQTPAPNPNMSITANQSTI
                     QQPNVSGTVWIRQKVALPPDAVLTVTLSDASLADAPSKVLSQKAVRTEGKQAPFSFVL
                     PFNPSDIQPNARILLSAAITVDNKLVFITDSVKPVINNGGTKADLTLVPVQQTAVPVQ
                     ASGGATTTVPSTSPTQVNPSSAVPAPTQY"
     gene            14746..15606
                     /gene="tesB"
                     /locus_tag="MOX77_002202"
     CDS             14746..15606
                     /gene="tesB"
                     /locus_tag="MOX77_002202"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase II"
                     /protein_id="HCA3357724.1"
                     /translation="MSQTLNNLLTLLNLEKIEEGLFRGQSEDLGLRQVFGGQVVGQAL
                     YAAKETVPEARLVHSFHSYFLRPGDSQKPIIYDVEVLRDGNSFSARRVAAIQNGKPIF
                     YMTASFQAPEPGFEHQKTMPTAVGPEGLPSETEIAQSLAHLLPPILKEKFLCDRPLEI
                     RPVEFHNPLKGHVSAPVRQVWIRANGTVPDDIRVHQYLLGYASDLNFLPVALQPHGIG
                     FLEKGIQIATIDHSMWFHRPFNFNEWLLYSVESTSASSARGFVRGEFYTQDGALVAST
                     VQEGVMRNHN"
     gene            complement(15706..16992)
                     /gene="amtB"
                     /locus_tag="MOX77_002203"
     CDS             complement(15706..16992)
                     /gene="amtB"
                     /locus_tag="MOX77_002203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter AmtB"
                     /protein_id="HCA3357725.1"
                     /translation="MKIAMIKTTLASLALLPGLTIAAPAVADKADSAFMMICTALVLF
                     MTIPGIALFYGGLIRAKNVLSMLTQVTVTFALVCILWVVYGYSLAFGEGNHFFGNADG
                     AMLKNIALTAVTGTIYQYIHVAFQGSFACITVGLIVGALAERIRFSAVLIFVVVWFTL
                     SYIPIAHMVWGGGLLAAHGALDFAGGTVVHINAAIAGLVGAYLIGKRVGFGKEAFKPH
                     NLPMVFTGTAILYIGWFGFNAGSAGSANEIAALAFVNTVVATAAAILGWIIGEWTLRG
                     KPSLLGACSGAIAGLVGVTPACGYVGVGGALVIGVIAGLAGLWGVTMLKRLLRVDDPC
                     DVFGVHGVCGIVGCILTGVFAASSLGGVGFVDGVTMGHQVMVQLESIAITVVWSGVVA
                     FVGYKLADILVGLRVPEEQEREGLDVNSHGENAYNA"
     gene            complement(17024..17362)
                     /gene="glnK"
                     /locus_tag="MOX77_002204"
     CDS             complement(17024..17362)
                     /gene="glnK"
                     /locus_tag="MOX77_002204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HCA3357726.1"
                     /translation="MKLVTVIIKPFKLEDVREALSSIGIQGLTVTEVKGFGRQKGHAE
                     LYRGAEYSVNFLPKVKIDVAIADDQLEEVIDIISKAAYTGKIGDGKIFVAELMRVIRI
                     RTGEADEAAL"
     gene            complement(17575..19356)
                     /locus_tag="MOX77_002205"
     CDS             complement(17575..19356)
                     /locus_tag="MOX77_002205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SmdB family multidrug efflux ABC transporter
                     permease/ATP-binding protein"
                     /protein_id="HCA3357727.1"
                     /translation="MRSFGQLWPTLKRLLAYGSPWRKPLSVAVMMLWIAVAAEVSGPL
                     LISYFIDNMVARHHLPLGKVAGLAAAYVGLQFLAAGLHYAQSLLFNRAAVGVVQSLRT
                     DVMDAALRQPLSAFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAM
                     FSLDWRMALVAVLIFPAVLTVMVIYQRYSTPIVRRVRAYLADINDGFNEIINGMSVIQ
                     QFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRPLLSLFSALILCGLLMLFSFTSA
                     GTIEVGVLYAFISYLSRLNEPLIELTTQQSMLQQAVVAGERVFELMDRPRQRYGSDDR
                     PLQSGAIDIDHLSFAYRDDNLVLQDITLSVPSRSFVALVGHTGSGKSTLASLLMGYYP
                     LTQGEIRLDGREIASLNHRVLRQGVAMVQQDPVVMADTFLANVTLGRDVSEAQVWQAL
                     ETVQLADLARGLSDGLHTHLGEQGNTLSVGQKQLLALARVLVDAPQILILDEATASID
                     SGTEQAIQQALAAIRERTTLVVIAHRLSTIVEADTILVLYRGQAVERGTHQQLLAAQG
                     RYWQMYQLQLVGEELAASVHEESGPTA"
     gene            complement(19349..21121)
                     /locus_tag="MOX77_002206"
     CDS             complement(19349..21121)
                     /locus_tag="MOX77_002206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SmdA family multidrug ABC transporter
                     permease/ATP-binding protein"
                     /protein_id="HCA3357728.1"
                     /translation="MRLFAQLSWYFRREWRRYLGAVALLMLIAMLQLIPPKVVGIVVD
                     GVTAQHFTPGRIAMWIGTIALIAVVVYLLRYVWRVLLFGASYQLAVELREDYYRQLSR
                     QHPEFYQRHRTGDLIARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQL
                     TLLALLPMPIMALMIKRYGDRLHDYFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDR
                     QSSLFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAISGGSWMVVNGSLTLGE
                     LTSFMMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGEEPVPAGRGE
                     LTAAIREFCYPQTTHPALENVNFRLKPGQMLGICGPTGAGKSTILSLIQRHFDVTQGE
                     IRFHDMPLTHLQLDSWRSRLAVVSQTPFLFSDSIANNIALGRPEATQEEIERVARLAS
                     VHEDILRLPQGYDTQVGERGVMLSGGQKQRISIARALLLNAEILLLDDALSAVDGRTE
                     HQILHNLRQWGEGRTVIISAHRLSALTDANEIIVMQHGHVVQRGDHDQLAQQIGWYRD
                     MYRYQQLEAALDDAPERGEEAVNA"
     gene            complement(21162..21620)
                     /gene="decR"
                     /locus_tag="MOX77_002207"
     CDS             complement(21162..21620)
                     /gene="decR"
                     /locus_tag="MOX77_002207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator DecR"
                     /protein_id="HCA3357729.1"
                     /translation="MLDKIDRKLLCLLQQDCTLSLQALADAVNLTTTPCWKRLKRLED
                     DGILLGRVALLDPEKLGLGLTAFVLIKTQHHSSEWYCRFVTVVSEMPEVLGFWRMAGE
                     YDYLMRVQVADMKRYDDFYKRLVNSVPGLSDVTSSFAMEQIKYTTSLPIE"
     gene            21733..22788
                     /locus_tag="MOX77_002208"
     CDS             21733..22788
                     /locus_tag="MOX77_002208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent cysteine synthase family protein"
                     /protein_id="HCA3357730.1"
                     /translation="MMSSNWVKNAINEINADHQRSADTHLIRLPLSAFPGIQLYLKDE
                     STHPTGSLKHRLARSLFLYGLCNGWIKEDTPIIEASSGSTAISEAWFARLLGLPFIAA
                     MPACTAKRKIEQIQFYGGHCHFVESACEIYAASERLAHELNGHYMDQFTYAERATDWR
                     GNNNIADSIFRQMRNEPHPVPRFIVMSAGTGGTSATIGRYIRCQGYDTQLMVVDPENS
                     VFLPYWQDRDASLRSPVGSKIEGIGRPRVEPSFIPDVVDEMLRVPDAASVATAHWLET
                     QLGRKVGASTGTNMWGALQLAARMREAGETGAIVTLLCDSGDRYLDTYYHPAWVSDHI
                     GDLTPWSAAIAKLLTGD"
BASE COUNT         5570 a         6159 c         5745 g         5317 t
ORIGIN      
        1 cttgccgccg gcgccagatc gccgccgttg agatcgcgct tcacttcagt gacttcgtcg
       61 cccttcgcgt tatgcagatg cacctcaagc tggttaaagg caatattgat atcattttca
      121 cggcacagtc gatcgatcgc gcggttcagt tcatccaccg tatggctacg atcacgcaat
      181 tcacgcacat acagacgcag ttcatgatcc agagtgctgg cgccaaaggt ggtgaagaat
      241 acggcaggtt ccggatcgtg catcaccttc ggatgctcca tcgccgcctg tagcaggact
      301 cttttcactt tctccagatc cgagccatag gccacgccaa gccggatcac cagacgtgtc
      361 gtggtatcgg agagggacca gttaatcagc cgctccgtta cgaacgcttt gttcggaatg
      421 atcacttctt tacgatcaaa atcggtaata gtggtggcgc gaatacgaat cttactgacc
      481 gtgccggagt aggtgccgat cgttaccgta tcgccaatgc gtaccggacg ttcgaagagg
      541 atgattaaac ccgagacaaa gttaccgaag atctcctgta gcccaaaacc gagacctacc
      601 gacaacgccg ccgccagcca ctggagttta tcccacgaga cgccgagcga tccgaatact
      661 gtcatcgcgc caacagcgat aatgacgtag ttaaggatcg tggtgatcgc atacgaagcc
      721 ccttggcgca tattcaggcg tgaaagcacc agcacttcca gcaggccggg taagttgcgg
      781 atgagcgccc aggccaccat cgcggcaata atggcaaata gcaagctgcc catcgtcacg
      841 cttttcacca ccgcagcgcc agcttcggag ccgttgtagt gccacagcgt gatgctatca
      901 agatagctga atacggtgat caaatcggac caaatcgccc agaacataac gccaaacagg
      961 gcaagcatta gcagcatcgt gatacgtaat gtttgctggt taatttgctc caacgcgatg
     1021 gtgggttcct cctgtggttc cgccccttcc gctccctctt ttaccaggtt ctgacgacga
     1081 gccagcgcgc gtcgccaggc aatccggcgc gccgctacac ttaacccgcg cagcaccgtt
     1141 tgataaagca ggttccagat aatgaccaga tagacggttt caatccagcg ccccgccagg
     1201 cgcagggtgg tatagaaata gccagtcgcc gttaatacca ttaacgccac tggaataatg
     1261 gaaagaatcg tcacggtcac cagtcgaatg ccgtgagatt ctttatcgcg ccagctttcc
     1321 cggcacagtg gccacaccag caatgttatg accagcagat tgaggaaaat aaccgcctgc
     1381 cccagcacgt catccatcag attcagcggc gacaactccg ccaccacaga ccaaaagtgc
     1441 agcggcagca atgcgaggct aatgcgtaca atctggcgac gccagtggct ggtcaactgc
     1501 gccggcatac caaaatggcg tatcgccacg ccttcttttt ccagcacctt ccagcacagc
     1561 ccaaagacca gccagaacat cgcgagcttt tcactaaagg cccagagcag atcgctgata
     1621 tttagctgca tggtcagcag gatcaatcca atcgcgagga taatcaggca caccggcagc
     1681 gcgcggatca gatcgatcag aatagctttt ggcgtattga gctgactatc gttacgcagc
     1741 gatcccacgg cggcggccag cttctgttga tacgctttta accatttcag acgccagcgg
     1801 attaaaccgg cgatgagcaa gagcggcaac ccggccaaaa aagcaataaa tactgcgggc
     1861 caggcttttt gccagttcac cgtgattttc atggcgctga attgctcttt taacgtttgg
     1921 gggaacgctt taagccagtc ccagtccata gggcggttac tgttcaccca aaaaatctgc
     1981 tgcgtcagaa tggctttcag atttttcgag acgctcatca actgctgctg gttaacttgc
     2041 aggttaatcg ccatcatcag ctggttaccc aactgtttat ttagctgatc caatagctca
     2101 cggcgcatct ccaccacctg aagcaacgca tcatgaactt catcattcac ctcgctggta
     2161 tgcccctcct ccagcttgtc gacaaaggca tcgctttgga ataaggcatc acgctgctgg
     2221 ttgatttcaa actgctccag acgcaaatcc gcaatgcggt tggtcatatc ttcgagttcg
     2281 tcggcggagg gcagggtttg ctgctgttga taaagaatac gcgacagcaa caggctgcct
     2341 tttaagacgg caatctgttc tttgatattt ctttccgact gcagagcgcg atcgagccag
     2401 ttttttactt taatgttttg ctgcatcaac atattgccgt tttcggtcgc gacaatcaga
     2461 cgctggctga gttgatggtt aatatccagt tcctgtttta ccaacgggtt cgcctggata
     2521 cgcgccgttt cgtccggcga aatagcctcc tgggccgttt tttccgttag cgtaagtcgt
     2581 ttactgttga ccgcctcctg taaaagttga agctgatgtt caaggcgatt actgttggcc
     2641 gtcacgtaat cccgctgttt ttgcagggtg tcctgcaaaa cggtattccc ttcaagactc
     2701 ttacgttgct ggtcgatctg cgcattaagc agcgcctgtt gtgcctgtaa taacacctgt
     2761 tggctggggc gaagcgcggc ttcgccgacg ttattgccgt ccagacggtt acggatttgc
     2821 tgtatttgct gtgaggcggt atacatggcg ttttgcacgc gctccggctg ggtttgtagc
     2881 gaaacaagct ggctgttata agcggcaaga tcgttttgcg agttttgcaa atcatccagt
     2941 acctgcgcca cgcgcagctc aagctgacgt agcgaaagcg cactcagcgt ttttcgcatt
     3001 tcatcatcat tatcgacatc gctcagcgca ttcaacgcag ccgtcgcctg acgcattttt
     3061 tcaggcgcct gcgccacctt ctgccgtagc tgtacggtct cctcttttac ccgctcgatt
     3121 ttctccagcg tagctaacgt atcaataagg tcttgctgga cgagcttatc ctgggcggag
     3181 agatcttttt gcttattcag cgtatccagc tggttttgca catccgcttt tgacggcagg
     3241 tcgccattcg tttgcccccg ggcaaacgcc agagactgac aggacagcag gataataaga
     3301 acgctaattg taataaaaac aaaatgctgt gaacgtttat aaagctgcaa catagtcatg
     3361 agaatgaagt gtctgaaccg gcaagcagac cggaaataat tgagtcgcaa gaatatcacg
     3421 cctgtaacaa acagaatagc gacacagaaa atgtccagga gttttcctgg aatattatca
     3481 gggggagccg ttgaccgtcg acgcgcgcag cgtcggacac aattgataca tctccagcag
     3541 gatcgtgacg taggcgcgag cttctttttt taaatcaaac gattgcggag caaataacca
     3601 gttttccatg agccctgaaa taaagctgcg catcagtatc gccgcacgac gggtcagcag
     3661 attttcaggc agcattttag cattaataca atgttttaac gtttgttcaa tccgatcgta
     3721 actttccaga caaaggctac gttgcgcctg ttgaaccaca accatttctc cgacaaactc
     3781 acatttatgg aatataatct ccatcaataa gcggcgtcgt tcttctgtta cagtagcttc
     3841 aagaatatga actaaaattt ctcttaatac agatagtgga tcgtcgggga attttgcctg
     3901 atactcaatc tcaagctcac caatattgga ttctgatagc tcccagatct cactgaataa
     3961 atccgactta tttttgaaat gccaatagat tgcgccgcgc gtcacgccag cagcgttcgc
     4021 aatctccgcc agcgaggttg ccgatacgcc ttgctgcgag aacaaacgca gggccacatc
     4081 caggatgtgt tgtcgtgtct ccagcgcttg ttgtttggtt tttcgtgcca tatgtcggtg
     4141 aatttacagg cgttagattt acatacattt atggatgtat gtaccatagc atgacgataa
     4201 tataaacgca gcaatgggtt taaggacctt tgaccattga ccaatttgaa atcggacact
     4261 cgaggtttac atatgaacaa aaacagaggg ttaacgcctc tggcggtcgt tctgatgctc
     4321 tcaggcagct tagcgctaac aggatgtgac gacaaacagg accagcaagg cggccagcag
     4381 atgccagaag ttggggttgt cacactaaaa acggaaccac tgcaaatcac aactgaactt
     4441 ccgggtcgta ccgttgctta ccgtatcgcc gaagttcgcc cgcaggtaag cggcattatc
     4501 ctgaagcgta atttcgttga gggaagtgat atcgaagcgg gagtctctct ctatcagatt
     4561 gatcctgcga cttaccaggc gacttacgac agcgctaagg gcgatctggc aaaagcgcag
     4621 gccgccgcga atatcgctga actgacggtg aagcgttatc aaaagctgct gggtacgcag
     4681 tacatcagta agcaggaata cgatcaggcg ctggctgacg cgcaacaagc gactgccgcc
     4741 gttgtcgcag caaaagccgc cgttgaaacc gcacgtatca acctggcgta taccaaagtc
     4801 acctcaccga ttagcggtcg tattggtaag tcgtccgtaa cggaaggcgc gctggtacag
     4861 aacggtcagg cgtcggcgct ggcgacagtg cagcagctgg accctattta tgtcgatgtg
     4921 acccagtcca gcaatgactt cctgcgcctg aagcaggagc tggcaaatgg ttcgctgaag
     4981 caggaaaacg gcaaagcgaa ggtcgatctg gtgacaagcg acggtatcaa attcccgcag
     5041 tccggtacgc ttgaattctc cgacgtgacc gttgaccaaa gcaccgggtc tattactttg
     5101 cgcgccatct tccctaaccc ggatcacacc ttattgccag gaatgttcgt tcgcgcacgt
     5161 ctgcaggaag ggacaaaacc gacggcatta ctggttccac aacagggcgt tacccgtact
     5221 ccacgcggcg atgccacggt gctggtggtt ggcgctgata acaaagtgga aacccgccaa
     5281 atcgtcgcaa gccaggcgat cggcgataag tggctggtga ctgacgggtt gaaagcgggc
     5341 gaccgcgtag tcgtcagcgg gctgcaaaaa gtacgtcctg gcgcacaggt taaagtgcag
     5401 gaaattaccg cggataacaa acagcaagcc gcaagcggtg atcaacctgc tcagcccagg
     5461 tcttaactta aacaggagcc gttaagacat gcctaatttc tttatcgatc gccctatatt
     5521 tgcgtgggtg atcgccatca tcatcatgtt ggcagggggg ctcgcgatcc tcaaattgcc
     5581 ggtagcgcaa tatccgacga ttgcgccacc agcagtgacg atctccgcaa cctaccctgg
     5641 cgctgatgcg aaaacggtac aggataccgt cacgcaggtt atcgaacaga atatgaacgg
     5701 tatcgataac ctgatgtata tgtcctccaa cagtgactcc acggggaccg tacagatcac
     5761 gctgaccttt gaatccggca ccgatgcgga tatcgcgcag gttcaggttc agaacaagtt
     5821 gcaactggca atgccgttac ttccccagga agtacagcaa cagggcgtga gcgttgagaa
     5881 gtcctcaagt agcttcctga tggtagtggg cgtcattaac accgacggca ccatgaccca
     5941 ggaggatatt tcggattacg ttgccgccaa tatgaaagat ccgatcagcc gtacctctgg
     6001 ggtgggcgac gtccagctgt ttggttcgca gtatgcgatg cgtatctgga tgaatccgac
     6061 agagctgacc aaataccaac tgacgccggt cgacgtgatt aacgcgatca aagcgcagaa
     6121 cgcccaggtc gcggcaggtc agctcggtgg tacaccgccg gtaaaaggcc agcagcttaa
     6181 cgcatcgatt attgcccaaa cgcgtctgac ctcaacggat gagtttggca aaatcctgct
     6241 gaaagtgaat caggatggct ctcaggttcg tctgcgggat gtagcgaaaa ttgagcttgg
     6301 cggcgaaaac tacgacgtca tcgcgaaatt taacggtcag ccagcgtcag gtcttggcat
     6361 caaactggct accggcgcca acgcgctgga taccgctacc gctattcgcg ccgaactgaa
     6421 aaaaatggaa ccgttcttcc cgccagggat gaaaatcgtc tacccgtatg acaccacgcc
     6481 gttcgtgaag atctctattc atgaagtggt aaaaacgctg gtcgaagcga ttatcctcgt
     6541 gttcttggtg atgtacctgt tcctgcagaa cttccgcgcg acgttgattc cgactattgc
     6601 ggttccggtg gtgttgttgg gaacctttgc cgtgcttgcg gcattcggtt tctcgataaa
     6661 cacgctgacg atgttcggga tggtgctcgc catcggcttg ctggtggatg acgccatcgt
     6721 ggtggtcgag aacgtcgaac gtgttatgac ggaagaaggc cttccgccga aggaagcgac
     6781 gcgcaaatcc atgggccaga ttcagggcgc attggtgggt atcgcgatgg tactgtcggc
     6841 ggtatttatt ccgatggcct tctttggcgg ctcaaccggg gcaatttatc gtcagttctc
     6901 tatcaccatc gtatcggcga tggcgctgtc ggtgctggtc gcgctgatcc tgacgcccgc
     6961 gctgtgcgcg acgatgctca aacccgtcgc caaaggcgat catggcgaag ggaaaaaagg
     7021 ctttttcggc tggtttaacc gcctgtttga taagagcacg catcactaca ccgatagcgt
     7081 agggaatatt ctgcgcagca ccgggcgtta tctgctgctc tatctcatta tcgtcgtcgg
     7141 tatggcttat ctgttcgttc gtctgccaag ctctttcttg ccggatgaag accagggcgt
     7201 attcctgaca atggtccagc tccccgccgg cgcgacgcaa gagcgcacgc aaaaagtgct
     7261 ggatgaggtc acggattact atctgaacaa agagaaagcc aacgttgaat cggtattcgc
     7321 cgtcaacggc ttcggttttg cagggcgcgg tcagaatacc ggtattgcat ttgtgtcgtt
     7381 gaaagactgg gccgatcgtc caggcgaaaa aaacaaggtt gaagcgatta cccagcgggc
     7441 aaccgcagcg ttttcacaaa ttaaagatgc gatggtcttc gcctttaacc taccggcgat
     7501 tgttgaactg ggcaccgcaa ccgggtttga cttcgagttg attgaccagg cgggacttgg
     7561 tcacgaaaaa ctcacccagg cacgtaatca gttgttcggc gaggtggcga aatatcctga
     7621 tctgttggtc ggcgttcgac ctaacggtct ggaagatacg ccgcagttta aaatcgatat
     7681 cgaccaggaa aaagctcagg cgctgggcgt gtctattagc gacattaata ccacgctggg
     7741 cgcagcatgg ggcggcagct atgtaaacga ctttatcgat cgcggtcgtg tgaagaaagt
     7801 ttacgtgatg tccgaagcga aataccgcat gttgccggat gatattaacg actggtacgt
     7861 tcgtggtagc gatggtcaga tggtgccgtt ctccgcattc tcctcttccc gctgggaata
     7921 tggttcgccg cgtctggaac gctataacgg tctgccttcg atggaaattc tgggtcaggc
     7981 ggcgccaggc aagagtactg gtgaagcgat ggcgatgatg gaagaactgg ccagcaagct
     8041 gccgtcaggc attgggtatg actggaccgg gatgtcctac caggagcggt tgtccggcaa
     8101 ccaggcccct gccctgtatg ctatctcgct aatcgtcgtc ttcctgtgtc tggcggcatt
     8161 gtatgagagc tggtctatcc cgttctccgt aatgctggtt gttccgcttg gggttatcgg
     8221 cgcgctgctg gccgcgacct tccgcggact gactaacgac gtttacttcc aggtgggcct
     8281 gctcacaacc attgggttgt cggcgaagaa cgcgatactt atcgtcgaat tcgccaaaga
     8341 cttaatggat aaagaaggga aaggtctggt agaagcgatg ctggaggccg tccggatgcg
     8401 tttgcgtccg attctgatga cctcgttagc gttcatgctg ggggttatgc cgctggttat
     8461 cagttccggc gcgggttccg gcgcgcagaa tgcggtaggt actggcgtac tgggcgggat
     8521 ggtaacggca accgtactgg ctattttctt cgtaccagtc ttcttcgtgg tggtacgccg
     8581 ccgctttagc cgtaaaagcg aagatattga gcatagtcat tcgacagaac atcgctgatt
     8641 tgctcactgt tgataaggcc gcgcaagcgg ccttttttac gcaaaaatca taaaatacgc
     8701 ttattgttag attgattatt ttttgccata ttaataaaag gtataatcct tactgcgtta
     8761 aaggcttttc ttaggaaagt tggccatttc ttaattcagc cattaattaa gaaatattaa
     8821 gaatattcct agctattttc tcctgtcaga gtctattgtt ttagcctgaa aagctaaaaa
     8881 acgttaaccc aatgattata cgagcaataa aactggttcc tttttaggcg accgacgttc
     8941 actgttaaaa ttcgaaaaag tatggcgaca cacggctttc acgcaattgt aatttttagt
     9001 aatatgacga tgaaaagttt tttagagtag attatagtta aatcataagg tgacgtggga
     9061 agtaccaggt tagttagttg tatccatccc gaaggtgttc ggttagttta agccactaaa
     9121 aaggggatgc attatggacg aatactcacc caaaagacat gatatagcac agcttaaatt
     9181 tctttgcgaa accctgtatc atgactgtct tgcaaacctt gaagaaagca accatggctg
     9241 ggttaatgac ccgacctcag cagtcaacct gcagctcaat gagctgatag agcatattgc
     9301 aactttcgcg cttaattata aaattaagta caatgaagac aataaattga ttgcgcagat
     9361 agatgaatac ctggacgaca cctttatgtt gttcagcagc tatggtatta atacgcagga
     9421 tttgcaaaaa tggcgtaaat cgggcaaccg cctgttccgt tgtttcgtca acgccaccag
     9481 ggctaatcct gttagtttgt cttgttaaaa attattacaa tcataggtag aatttatgtc
     9541 tgataaacca ttaactaaaa ctgattattt gatgcgttta cggcgctgtc agacaattga
     9601 cactctggag cgcgtcattg agaaaaataa atatgaattg tccgacaatg agctggctgt
     9661 attttactca gctgcggatc accgtcttgc agaattgacg atgaacaaac tctacgacaa
     9721 gatcccctct tcagtatgga aattcattcg ttaatcacgc tacattactt tttagagaac
     9781 acgcaggtgt tatctgcctc ctcgttctgg ctaataacac aacgggctat tatagaacag
     9841 tgatatagat cacataccaa tagcagggaa cgttccctct aatactttat tattgcttct
     9901 attgcgataa tatccaccaa ggggagcgcg cgatgagtga cgaaaaacaa aaaatgatcg
     9961 ctggggcact gtattgcccg accgatgaaa ctttatgcca ggatcgactg cgggcgcgtc
    10021 aactcatcca tcaatacaat tatactacgc ctgatgaaat aaataagcgt caggcgattt
    10081 tacgcgacct gttgggtcga tgcgaagacg cctatattga accttccttc cgttgcgact
    10141 acggctataa tatttttctt ggtcactcct tttacgctaa cttcgactgc gtcatgcttg
    10201 atgtttgccc aattcatatt ggcgataatt gtatgctcgc gccaggggta catatctata
    10261 ccgccacgca cccgctggac gccgtcgaac gcaacagcgg cagagaatta ggtaaacccg
    10321 tcactatcgg aaataacgtc tggataggcg gacgagccgt cgttaatcct ggcgtaacca
    10381 tcggcgataa cgtcgtcgtc gcttcaggcg ctgtggtgac aaaaaacgta ccgccagacg
    10441 tcgtggtagg cggaaatccg gcgcgaatca ttaaaaaatt gtagttcaaa tgataactgt
    10501 tatgctaatt cgtggttaat ctgttacttt tttcacgtta cacctccctt taaaatgggc
    10561 tgttactacc ccctatgtcg cagaaatcat gaaggcaaaa gatgacagag atacagcgcc
    10621 tgcttagcga aactattgat gacttaaacg tccgtgaaaa acgcgataac aggccgcgtt
    10681 ttagtataag ttttatccgc aagcatcctg ggttatttat cgcgatgtat gcagcctggt
    10741 ttgcgacgct ggcggtcatg ctgcaatcag aaacgctggt ggggtcagtg tggctgttag
    10801 tggtgttatt tatcgcattt aatggcttct tctttttcga catcgccccg cgttatcact
    10861 ataacgacat cgatgtgctg gacctccggg tctgttacaa cggcgaatgg tacaacaccc
    10921 gctttgttcc ccccacgctc attgagacga ttcttcagtc tccacaggtg gataatgaac
    10981 ataaagtcca gctgcaaaaa atggttgccc gtaagggcga actttccttc tacgatattt
    11041 ttacgctggc ccgcgcagaa gccagccggt aataaaaaag tgcgcaccct ccctggtacg
    11101 cactgctttc cctgaactgt tggtttttta acgtcttttt ttacgcccct gaaccgcctt
    11161 aaaacgcgga tttgttttac aaatcacgta taagcgtcct ttgcgtttga ctatctggca
    11221 atccggatgc cgttgttttg cattgcgaag tgagtttaac acctgcattt catttacccc
    11281 cgtttagcgc cgataaaatg accaaaacgt ttctggaagc gtgcggcgct actttcgcta
    11341 tcaaacgttt tctgtctacc ggtataaaaa ggatgcgatt ttgatgacac atcaatagtg
    11401 acatacggat atgtcacgcc gtccagttcg atttcacgtt cagttttgat agttgatccc
    11461 actttcacat attcatttgc gctggtgtcg tgaaatacga cggttcggta tacaggatga
    11521 atatcaggtt tcattgcgct ctctcaatta tgttataaca taacaataaa atacgctatc
    11581 aacgctcctt tttcaaccgg taaacattca cgatctcttc ctggcggcaa aagcaacgtg
    11641 gcgtaacgcg ttagtctggc ccctgtatct gtaaaatcga taaaatagct ttatcattcg
    11701 agggcgcgat ttacgatcgg atatactttc tctacgctgt gtttataagg acatcactgt
    11761 gacaacacga catctggtca gcctggtaac gggagtgctt atcctgtctg tccttttccc
    11821 gataggattg agcctgtggc tggcgcaccg tcaagttgaa aaaaggttta acgaagagct
    11881 ggatatcttc tcgtcccggg tggcgctacg tacagaaagg gtcagtgacc aggcaaaagc
    11941 cgcgttaacg catattgcct cctttaaagg cgagccctgc agcagcgccc atttactcgc
    12001 catgcgccgc gtgtcttata gctttcggta tgtccaggaa gttctgtatc ttaaaaattc
    12061 gattcccgtt tgctcctcac ttgaaaaaga gagccatatt cccgctttcc ctccgcccat
    12121 gaaaatcact cgcgacggtt atcgcgcctg gtttacggcg caaaacgatc tgggtataaa
    12181 acgctatatg gcggcactcg ggagcgacag ctatatcgtg atgatcgacc cggcgtcctt
    12241 tatcgatgtg attccgtttg gcgcatggcc gattgacgtc gctattattg gccgggaacg
    12301 caatactgtg gttgccagca gcggtaacct tgaccacgct attcttccgc tcattcacca
    12361 tgagacgccc ctgcggctgg aaaaccgagg cattcagtat gctatccacc cctttccgga
    12421 aatgggcatt actatcgtaa gctgggcacc gaccgctccg ctggaaagga gctggtatcg
    12481 acaagcgttt atctggctac cggcgggcat cgtaacgggt ctgctggctg cggcctttat
    12541 tctgcgtatt ttgcgtcggc tacaatcgcc ccgccaccgt ctccaggatg cgatagacaa
    12601 tcgcgaaatt aacgtacact atcagcctat tgtctccctg agcagcggaa aaattgtcgg
    12661 tgccgaagcc ttagctcgct ggcaacaggc ggacggcact ttcctttcgc cggaaatttt
    12721 tatcgcgctg gctgaacaaa ccgggctcac ggagccgcta acccggctaa tcatcgacac
    12781 cgtttttgaa gacatgggga gttggttaaa gtcccatccc gaacaacata tttcaatcaa
    12841 tcttgaggca tccgatctgg cgtcggaaac gctcccgacg ctgttaagca cgctgctgaa
    12901 ccgtagccaa atttctccgt cgcaaatcgc gcttgagtta acggagcgcg agttcgccga
    12961 tccgaaaacc agcgcgccca ttgtcgccag ataccgtaac gcgggacatt ccatttatat
    13021 tgatgacttt ggcaccggct attccagcct cagctactta caaaatctgg atgtggatgt
    13081 ccttaaaatt gataaatctt ttgtcgatgc gctggaatat aaaaacgtca cgccgcatat
    13141 tattgaaatg gcgaaaacgc tcaaacttaa gatggtcgca gaaggcatcg aaacgaccag
    13201 gcaagaacag tggctacgcc agcatggcgt acattatggt cagggctggt tatacagtaa
    13261 gcccctaccc gctacggcat ttattctttg ggtggaacag cggctataac gtcgcacagc
    13321 agaaaagaac agtgtggaaa ggcagaattg ggtgggggcc ctgccagcta catcccggca
    13381 cacgcgtcat ctgccttggc tgcttccttc cggacctgac ctggtaaaca gagtagcgtt
    13441 gcgggagaac caacagagcc cccattgaga gcgttgtgaa ccaacgcgca ggcgcattat
    13501 cactgctata tcgtgcaatt gcaacctatc aggcatcgga tgctggtttc ttgcgcatcc
    13561 gggctttcct ccccccttat tccagattat cctgaagcat taacgcagga ttctattatg
    13621 gatattcagg acacatttcc tcaacgcgtc tggcaaatcg tcgcctcgat cccggaaggg
    13681 tttgtcacga cctacggtga tgtcgcccgg cttgccggtt cccctcgggc ggcgcgtcag
    13741 gtcggcggag ttttaaaacg tctgccggaa ggcagcactt taccatggca tcgggtggtg
    13801 aaccgccacg gcgcaatatc acttaccggg ccggatctac agcggcaacg tcaggcatta
    13861 ctggcggaag gcgtggtggt gtcgggaagc ggacaaatcg atttacaacg ctatcgctgg
    13921 gtgtattaac cctctccgta acggagaggg ttggcgcagg attaatactg ggtaggcgca
    13981 ggaacggcag aagacggatt gacctgggtc ggcgaagtcg atggaaccgt cgtcgtcgca
    14041 ccgccgctgg cctgcacagg caccgccgtt tgctgtaccg gtaccagcgt cagatccgct
    14101 ttagtgccgc cattgttaat caccggtttc acgctatcgg taataaatac cagcttattg
    14161 tcaacggtga tggccgcgct cagaagaata cgcgcgttag gttgaatatc tgatgggtta
    14221 aacggcaaca caaaactgaa aggcgcctgt ttaccttcgg tacgtaccgc tttttgcgac
    14281 agcaccttag acggcgcatc agccagcgaa gcatctgaaa gcgtcacggt cagcaccgca
    14341 tctggcggca gagcgacctt ctggcggatc cagacggtac cggaaacatt gggttgctga
    14401 atagtagact ggttagctgt aatcgacatg ttagggtttg gcgcaggcgt ctggatatca
    14461 gcgcttttat cagcgcaggc cgccagagat atcgcaaccg ctaaaccact tacgatgtgc
    14521 acgagtttca ttcaattctc cttatcatca atgcaccagc aggcctttcc ccccgccgga
    14581 agagtggtta acagaaatac aacgtgatta agtgtggcac atgtcactca tttttgcctg
    14641 gaattggtct gttattcaga cttttgtacc catcggacca cttgcaaaat tgcgttatac
    14701 tctgccctac ctcgcttcgg catcgttgtc acctggagag tatgtatgag tcagacactg
    14761 aataatttgc tgacattatt gaatctggaa aaaattgaag aaggactctt tcggggccaa
    14821 agtgaagact tagggctgcg ccaggtattt ggcggtcagg tggtgggcca ggcgctctat
    14881 gccgccaaag aaacggtgcc ggaagcgcga ctggtgcatt cattccacag ttattttctg
    14941 cggccaggcg acagccaaaa acccattatc tatgacgtag aagtgctgcg cgatgggaat
    15001 agcttcagcg cccgccgcgt tgccgctatt cagaacggga aacccatctt ttacatgacc
    15061 gcctcattcc aggcaccgga accgggtttt gaacatcaaa aaaccatgcc gacggcagtc
    15121 gggccggaag gactaccgtc agaaacggaa atcgcgcaat cgctggcgca tttactgccg
    15181 ccgattctga aagaaaagtt tctctgcgat cgcccgctgg aaattcgtcc cgtcgaattt
    15241 cacaatccgt tgaaaggtca cgtctccgcg cctgtgcgtc aggtatggat tcgcgccaac
    15301 ggcaccgttc cggatgacat tcgcgtccat caatatttac tgggatacgc ctcggatctg
    15361 aatttccttc ccgtcgcgct tcagcctcac ggcatcggtt ttctggaaaa gggcattcag
    15421 atcgccacta tcgatcactc tatgtggttc catcgtccgt tcaattttaa tgaatggcta
    15481 ctttatagcg tggagagcac ttccgcctcc agcgcccggg gctttgttcg cggcgagttt
    15541 tatactcagg atggcgcgct ggtcgcttca accgtgcagg aaggggtaat gcgtaatcac
    15601 aattaaaaaa catgccgcta tgcggcgtta atggcctgat gacgctgcgc ttatccggcc
    15661 tacggtagac tgggtaagcg cagcgccatc aggcatgttg cgcaatcacg cgttatacgc
    15721 attctcgccg tgactgttca catccagccc ctcgcgctcc tgctcttccg gtacacgcag
    15781 tccaacaagg atatccgcca gtttgtaacc aacaaacgcg acaacgccgg accagacgac
    15841 cgtaatagca atactttcca gctgtaccat cacctgatgt cccatcgtaa cgccgtcgac
    15901 aaagccgacg ccacccagcg aactggcggc aaaaacgccg gtcaggatac agccgactat
    15961 tccgcaaacg ccgtgaacgc caaatacgtc gcacggatca tctacccgta gcagacgttt
    16021 aagcatggtg actccccaca atcccgccag acccgcaata acgccgataa ccagcgcgcc
    16081 gccaacgcca acatagccac aggctggcgt cacgccgacc agaccggcaa tcgcgccgga
    16141 acacgctccc agcagggaag gcttaccgcg tagcgtccac tcgccgataa tccaccccag
    16201 aatcgcggcg gcggtcgcca ccacggtgtt cacaaaggcc agcgctgcta tctcgtttgc
    16261 gctacccgca gaacccgcgt taaatccaaa ccagccgata tacagaatcg cagtaccggt
    16321 aaagaccatc ggcaggttat ggggtttaaa tgcttctttc ccaaagccga cgcgtttgcc
    16381 aattaaataa gcccccacca gcccggcgat agcggcgtta atatgcacca ccgtaccacc
    16441 ggcaaaatcc agcgcgccgt gagcagccag caggccgccg ccccacacca tgtgcgcaat
    16501 cgggatataa gagagcgtga accacaccac gacaaaaatc agtaccgccg aaaaacgaat
    16561 acgctccgcc agcgcgccga caatcagccc gacggtaata caggcgaaag atccctgaaa
    16621 cgcgacatga atatactgat aaatcgtacc cgttaccgcc gtcaacgcga tattcttcaa
    16681 catcgcccca tcggcattac cgaagaaatg attcccttcg ccaaaagcca gcgaatagcc
    16741 gtacaccacc cataaaatac agaccagcgc aaaggtgacg gtcacttgcg ttaacattga
    16801 cagcacattc ttggcgcgaa ttaatccgcc gtaaaacagc gcgatacccg gtatcgtcat
    16861 gaacagcacc agcgcggtgc aaatcatcat aaaagcacta tccgctttat cggcaaccgc
    16921 tggcgcggct atcgttagcc caggcagcag cgccagtgaa gccagtgtgg tttttatcat
    16981 cgctatcttc attttttcat ttcctgttgc tgtgtggcgg gtcttacagc gctgcttcgt
    17041 cagcttcgcc ggtacgaatc cgaataacgc gcatgagctc cgcgacgaaa attttgccgt
    17101 cgccaatttt tccggtgtaa gccgctttac tgatgatatc gatcacctct tccagttggt
    17161 cgtcggcgat agccacatca attttgacct tcggcaggaa attcacgctg tactccgcgc
    17221 cgcgatacag ttcggcgtgt cctttctgac ggccaaaccc tttcacttcg gtgacggtca
    17281 gtccctgaat gccaatggaa gaaagcgcct cccgcacgtc ctccagcttg aacggtttga
    17341 taatcacggt aaccagcttc atagaaccct ccagtcagaa ttaggtaacg gctgccgccg
    17401 cgcatggact cttcaggatg gatattgcaa aggatgtgcc agaagctggc gagcgaggaa
    17461 aagcgcggtt agcggcgcgt ctttatattg acgcgcccca aaaacgaagc agggaaagaa
    17521 aaacgcacca cgacggtgca taatgggcga ggttttgccc tgtggcgcca aaccttacgc
    17581 cgtagggccg gattcttcgt gtacgctggc ggctaactcc tcgccaacta actgtaattg
    17641 atacatttgc cagtagcgcc cttgcgccgc cagcaattgt tgatgcgtcc cgcgctccac
    17701 cgcctggccg cgatagagaa ccagaatggt atccgcctcc acgattgtcg atagccgatg
    17761 ggcaataacc accaacgtgg tgcgctcgcg aatcgccgcc agcgcctgct gtatcgcctg
    17821 ctcagtgccg gaatcgatgc tggccgtcgc ttcatcaaga attaatattt gcggggcgtc
    17881 aaccagcacg cgcgccagcg ccaatagctg tttttgcccg acggacagcg tatttccctg
    17941 ctcgccgaga tgcgtatgca gcccgtcgct caggccgcgc gccagatctg ccagttgtac
    18001 cgtttccagc gcctgccaca cctgcgcctc ggagacatcg cgccccagcg tcacattagc
    18061 cagaaaggta tccgccatca ctaccgggtc ctgttgaacc atcgccacgc cctggcgtaa
    18121 aacgcgatga ttaagagagg cgatttctcg cccatccagc cgaatttcgc cttgtgtcag
    18181 ggggtaatac cccattaata agctggcgag cgtgctcttc ccgctgccgg tgtgccccac
    18241 cagcgccaca aagctacggg acggtactga tagcgtaatg tcctgtaaaa caagattatc
    18301 gtcgcggtaa gcaaacgaca gatgatcaat atcaatcgcc ccgctttgta acggcctgtc
    18361 gtcgctgcca tagcgctggc gcgggcgatc catcagttca aaaacacgct ctcccgccac
    18421 aaccgcctgc tgtagcatgg attgctgggt ggtcagttca atgagcggct cgttcagacg
    18481 tgacaaatag ctaatgaacg catacagcac cccgacctca atcgtgccgg cagacgtaaa
    18541 gctgaaaagc atcaacaaac cgcataaaat gagcgcggaa aagaggctaa gcagcggacg
    18601 caataaaaag ccgtccaagc gcagcgtctg catccgcgcc atgtagtgcg agcggctggc
    18661 ctcgcccatg cgttcgccga agcgcgcctg ctggcgaaac tgctgaatta cgctcatccc
    18721 attgatgatt tcgttaaagc cgtcgttaat atccgccagg tatgcccgca cgcggcgtac
    18781 aatcggcgtg ctgtagcgct gataaatgac catcacggtc aataccgccg gaaaaatcaa
    18841 aaccgccacc agcgccatcc gccagtcaag gctgaacatg gcgaccagca tggcgccgat
    18901 caacgccgcg ctacgtaata ccgttgcgac gaccgtgacg tacagatcgc ggatgacttc
    18961 cgtatcgttg gtcacgcgtg aaattaattg tccgacaggc tgcgtgtcga aggcgcttag
    19021 cggctggcgc aaggcggcat ccatgacgtc cgtgcgcaag gactgaacca cgccaacggc
    19081 cgcccggtta aataataaag actgggcgta atgcagaccc gccgccagaa actgtagccc
    19141 cacataggcg gccgccagcc ccgcgacctt gcccaacggt aaatggtggc gggccaccat
    19201 gttatcaatg aaatagctga tcagcagcgg accgctaacc tccgccgcca ccgcaatcca
    19261 cagcatcatc accgcgacag agagcggttt tcgccatggc gagccatacg ccagcaaccg
    19321 tttcagcgtc ggccatagct gtccaaaact acgcattcac cgcctcctcg ccgcgttccg
    19381 gcgcgtcatc cagagcggcc tccagttgct gatagcgata catatcgcga taccagccaa
    19441 tctgctgcgc cagttgatcg tgatcgccgc gctgaacaac atgaccatgt tgcataacga
    19501 taatttcatt ggcgtcggtc agcgcggata aacgatgcgc gctgatgatg accgtacgcc
    19561 cttcgcccca ctggcgcaaa ttatgcaaaa tctgatgctc cgtacgacca tctactgctg
    19621 aaagcgcatc atcaagaagc agaatttccg cattcaacag tagcgctctg gctatcgaga
    19681 tacgctgttt ttgcccaccc gataacatga cgccacgttc acctacctgc gtgtcatagc
    19741 cctgaggcaa acggagaata tcctcatgta cgctggctaa acgcgccacc cgttcaatct
    19801 cttcctgggt cgcctccggg cgtccgagcg caatattatt ggcaatagaa tccgagaaca
    19861 aaaacggcgt ctggctgacg accgccagtc ggctacgcca gctatccagt tgcagatgcg
    19921 tcaacggcat gtcatggaat cggatctctc cctgcgtcac atcaaaatgg cgctggataa
    19981 gcgacaagat tgtgcttttc cccgcgccgg tcggaccgca tatccccagc atctgacccg
    20041 gtttaagacg aaagttcaca ttctccagcg ccggatgcgt cgtttgcgga tagcaaaact
    20101 cacgaatggc cgccgtcagt tcgccccgcc ccgccgggac gggctcttcg ccatccttaa
    20161 ctaccggcgc ttccgccagc atggcgcgga tgcggctgta agcggcgcta ccccgctcca
    20221 cgatattaaa catccaggcc agcgccagca tcggccaaat catcaacccc agatacatca
    20281 taaagctggt gagttcgccc agcgtcaggc tgccgttaac caccatccag cttccgccgc
    20341 taatcgcgag caggttcgcc atgccaatgg cgatgtaaat ggttggatca aaacgcgcgt
    20401 caatacgcgc cacgcgcata tttttcttgc cggtatcttc ggcatccgcc gcaaacagcg
    20461 aagactggcg gtcctccaga ccaaacgctt tgatcatgcg gatgctggtc agactctcct
    20521 gcgtgcggtc gttcaggctg gagaaggcgg cctgcgccag tttgaaataa tcatgcagtc
    20581 gatcgccgta acgtttgatc atcagcgcca taatcggcat cggcaacagc gctaatagcg
    20641 ttagctgcca gctaatttgc gtcgacatga caatcagtac cgcgcagccc attaccagcg
    20701 agtcaaccag cgtcagaacg ccctcgcccg ccgcaaatac gacgcgatcc acatcattcg
    20761 tcgcacgcgc aataagatcg cccgttcgat ggcgctgata aaattcagga tgctgacgac
    20821 tcagctggcg ataataatct tcacgcagtt cgacggctaa ttgataagaa gcgccaaata
    20881 gcagcacgcg ccagacatag cgcaacaaat agaccactac ggcgatcagg gcaatggtgc
    20941 caatccacat cgctattcgg cctggagtaa aatgctgtgc ggttacgcca tccacgacaa
    21001 tccccaccac tttgggcggg atcagctgaa gcatcgcaat aagcataagc agggccaccg
    21061 cgccaagata gcgacgccat tcccggcgaa agtaccagct taattgagca aataatcgca
    21121 cgcgttattt cctgatatga tttccggcaa taccgggaga attattcaat gggcagagag
    21181 gtggtgtact taatctgttc catcgcaaaa ctggaggtga cgtctgacag tcctgggacg
    21241 ctattgacca gacgtttata gaagtcgtca taccgcttca tgtcggccac ctgaactcgc
    21301 atcagatagt cgtactcccc cgccatccgc cagaagccaa gcacttccgg catctcagag
    21361 acgacggtca cgaaccgaca gtaccattca ctgctgtggt gctgcgtttt tatcaacaca
    21421 aaagcggtta accccagccc cagtttttcc gggtccagca gcgcaaccct gccaagcagg
    21481 ataccgtcat cttccaggcg tttaagccgc ttccagcaag gcgttgtcgt cagattaacg
    21541 gcatccgcca gcgcctgcaa agagagggta cagtcctgct gcaataagca aagcagttta
    21601 cggtcaattt tatctaacat acccactcca tagagaatat ttttctcctt acattgtaat
    21661 ttaaaggtca aatagcaaca attttttccg tacttttcgc tactcttggc acaaaatgat
    21721 aaatggatat taatgatgag tagcaattgg gttaaaaatg ccattaatga aattaacgct
    21781 gaccaccagc gctcagcgga tacgcatctt attcgtttgc ccctgtcggc atttccaggt
    21841 atccagcttt acctgaaaga cgaaagcacg catcccaccg gtagcctcaa gcatcgtctg
    21901 gcgcgctcgc tgttccttta tgggttgtgc aatggctgga ttaaagaaga cactccgatt
    21961 attgaagcgt catcaggctc aacggcgatt tccgaagcct ggttcgcgcg tttactggga
    22021 ctgccgttca tcgccgccat gcccgcctgt accgcaaaac gtaaaatcga acagattcaa
    22081 ttttacggcg gccactgtca ttttgtggag agcgcctgcg aaatttatgc cgcctccgag
    22141 cggctggcgc atgaactgaa cggtcactat atggaccagt ttacctacgc agaacgagct
    22201 accgactggc ggggcaacaa taatattgcc gacagtattt tccgccagat gcgcaacgaa
    22261 ccccatccgg taccgcgatt tatcgtcatg agcgccggaa cgggcggaac ctctgcgacg
    22321 attgggcgct atattcgctg ccagggctat gatactcagc tcatggtggt ggatccggaa
    22381 aattctgtct ttttacctta ctggcaggat cgcgacgctt cattacgcag cccggtaggc
    22441 agtaaaattg aaggaattgg tcgtccgcga gtagagcctt cttttattcc ggatgtcgtg
    22501 gatgagatgc tgcgcgtgcc ggacgccgcc agcgttgcca ccgcacactg gctggaaacg
    22561 cagctaggcc gtaaagtcgg cgcctctacc ggcacgaata tgtggggagc gctgcagcta
    22621 gcggcccgga tgcgcgaggc tggagaaacc ggcgctatcg tgacgttatt gtgcgatagc
    22681 ggcgatcgct atctggatac ctattaccat ccggcctggg ttagcgacca tatcggcgat
    22741 ttgacgccgt ggtcagcggc catcgcaaaa ttacttaccg gcgactagaa a
//
LOCUS       DAGWFR010000056        22713 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.057, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000056 DAGWFR010000000
VERSION     DAGWFR010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 22713)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22713)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22713
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.057"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            66..638
                     /locus_tag="MOX77_002209"
     CDS             66..638
                     /locus_tag="MOX77_002209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016234457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HCA3357731.1"
                     /translation="MQIGYIRVSTNDQNTDLQRNALNCAGCELIFEDKISGTKSARPG
                     LKKLLRTLSEGDTLVVWKLDRLGRSMKHLITLIEELREKGVNFRSLTDSIDTSTPMGR
                     FFFHVMGALAEMERELIVERTLAGLEAARAQGRIGGRRPKLTKEQHEQIARLIKNGYS
                     RKQLAIIYDIGISTIYRYHPVEELQTQAEL"
     gene            919..2301
                     /locus_tag="MOX77_002210"
     CDS             919..2301
                     /locus_tag="MOX77_002210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HCA3357732.1"
                     /translation="MEKKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPAALLIGWA
                     ITGVGILLLAFAMLILTRIRSELDGGIFTYAREGFGELIGFCSAWGYWLCAVIANVSY
                     LVIVFSALSFFTDTPALRLFGDGNTWQAIVGASVLLWIVHFLILRGVQTAASINLVAT
                     LAKLLPLGAFIVLAIMMFKLDTFTLDFTGVELGIPVWEQVKNTMLITLWVFIGVEGAV
                     VVSARAKNKRDVGRATLLAVLAALGIYLLVTLLSLGVLARPELAEMRNPSMAGLMVKM
                     MGPWGEIIIAAGLIVSVCGAYLSWTIMAAEVPFLAAAYKSFPGIFARQNAQGAPSASL
                     WLTNICVQICLVLIWLTGSDYNTLLTIASEMILVPYFLVGAFLLKIATRPLHRAVGIG
                     ACIYGLWLLYASGPMHLLLSVVLYAPGLLVFLYARRTHKHDNVLNRQEVVLIGLLLVA
                     AVPATWMLVG"
     gene            complement(2363..2698)
                     /locus_tag="MOX77_002211"
     CDS             complement(2363..2698)
                     /locus_tag="MOX77_002211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GlpM family protein"
                     /protein_id="HCA3357733.1"
                     /translation="MGLVIKAALGALVVVLIGLLSKTKNYYIAGLIPLFPTFALIAHY
                     IVASERGIDAMRTTIVFSMWSIIPYFIYLATLWYFSGVMRLPVALGGAVVCWGLSAWL
                     LIFCWIKWH"
     gene            2825..3556
                     /gene="rstA"
                     /locus_tag="MOX77_002212"
     CDS             2825..3556
                     /gene="rstA"
                     /locus_tag="MOX77_002212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator RstA"
                     /protein_id="HCA3357734.1"
                     /translation="MNRIVFVEDDAEVGSLIAAYLAKHDIDVIVEPRGDRAEDLILIT
                     QPDLVLLDIMLPGKDGMTICRDLRHRWQGPIVLLTSLDSDMNHILALEMGACDYILKT
                     TPPAVLLARLRLHLRQSEQTQQAKSLQESALTPHKALRFGALTIDPLNRAVQLNGDFI
                     SLSTADFELLWELATHAGQIMDRDALLKTLRGVNYDGLDRSVDVAISRLRKKLLDSAA
                     EPYRIKTIRNKGYLFAPHAWDETTG"
     gene            4037..5188
                     /gene="ompS2"
                     /locus_tag="MOX77_002213"
     CDS             4037..5188
                     /gene="ompS2"
                     /locus_tag="MOX77_002213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin OmpS2"
                     /protein_id="HCA3357735.1"
                     /translation="MKRKVLALVIPALLAAGAAHAAEIYNKDGNKLDLYGKVDGLHYF
                     SDDSSKDGDQTYMRVGFKGETQINDQLTGYGQWEYNVQANTTEGEGANSWTRLAFAGL
                     KFGDYGSFDYGRNYGVLYDVEGWTDMLPEFGGDSYTYADNYMTGRANGVATYRNTDFF
                     GLVDGLNFALQYQGKNESQSADDVNIGTNNRNNGDDIRYDNGDGFGISTTYDIGMGFS
                     AGAAYTTSDRTNEQVNAGGTIAGGDKADAWTAGLKYDANNIYLATMYSETRNMTPYGK
                     TDKGYDGGVANKTQNFEVTAQYQFDFGLRPAVSFLMSKGKDLTYNNVNGDDKDLVKYA
                     DVGATYYFNKNFSTYVDYKINLLDDDDPFYKDAGISTDDIVALGMVYQF"
     gene            5341..7047
                     /locus_tag="MOX77_002214"
     CDS             5341..7047
                     /locus_tag="MOX77_002214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HCA3357736.1"
                     /translation="MLMISLVPPLLSRTALLFLLTATGAATAARPAADIILHNGNIIT
                     LNDAQPQASALAISGSRIVAIGDDTATNEWRGDHTRTIDLQGKTVIPGLTDTHIHAIR
                     GGQTWTFETYWYDSPSLKDALDKLRADANRRPHDQWVAVVGSWIPAQFAENRASTVAE
                     LSHALPDHPAYIQYLYDYALVNQRGIDVLGLNDTPPPDLAGIRVERDAKGSATGKLFG
                     DIAAFNQLFASISSNADREGGLRQFFADMNARGVTGIIDPSAGPAAAYEPLFAMRNQG
                     DLPLRVGYRIPVQPEAKGHEAQWFSNLMAFRPARADDGQLAFLGLGESLVAGMNDGVR
                     MAPGFSSSEQDKTALRQVATFAAKRGIPLEIHAYTDDSADAILTIFEQVAQQYDLRPL
                     RWSIAHLNTGSPQTLERMRKLGLAYTVQMGPYFEGLAIRDANPPGATDNSPPVRLALD
                     KGLVVAGGTDSTRIGIAGVWHAIEYHITGIASGGSVRKPASERLTRLEALALYTRHAA
                     WLAFAEQHRGQLSVGKQADLAVLNQPFMTMPEDRIDTIRAVLTLVDGRIVHESPDLNA
                     GQ"
     gene            7158..8459
                     /gene="rstB"
                     /locus_tag="MOX77_002215"
     CDS             7158..8459
                     /gene="rstB"
                     /locus_tag="MOX77_002215"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     RstB"
                     /protein_id="HCA3357737.1"
                     /translation="MKKLFVQFYLLLFVCFLVMTLLVGLVYKFTAERAGRQSLDDLMK
                     SSLYLMRSELREIPPREWGKTLKEMDLNLSFDLRVEPLNHYKLDAATTQRLREGDIVA
                     LDDQYTFIQRIPRSHYVLAVGPVPYLYFLHQMRLLDIALMALIAFSLAFPVFIWMRPH
                     WQEMLRLESAAQRFGEGHLTERLHFDNGSSFERLGVAFNQMADNINALIASKKQLIDG
                     IAHELRTPLVRLRYRLEMSENLTPPESQALNRDIGQLEALIEELLTYARLDRPQNELM
                     LTKPDLPAWLFAHLQDVQSVNPERAVNLLTCVIGDYGALDMRLMSRVLDNLLNNALRY
                     SRTTVQVSLLLDGSQATLIVEDDGPGIEADARERVFEPFVRLDPSRDRATGGCGLGLA
                     IVHSIALAMGGSVVCDDSELGGAKFSFRWPVWHAMPDMTAA"
     gene            8535..9464
                     /locus_tag="MOX77_002216"
     CDS             8535..9464
                     /locus_tag="MOX77_002216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication terminus site-binding protein"
                     /protein_id="HCA3357738.1"
                     /translation="MSRYDLVERLNGTFRQIEQHLAALSDNLQQHSLLIASVFSLPQV
                     TKEAEHAPLDTIEVTQHLGKEAEALALRHYRHLFIQQQSENRSSKAAVRLPGVLCYQV
                     DNATQLDLENQVQRINQLKTTFEQMVTVESGLPSAARFEWVHRHLPGLITLNAYRTLT
                     LINNPATIRFGWANKHIIKNLSRDEVLSQLKKSLASPRSVPPWTREQWQFKLEREYQD
                     IAALPQQAKLKIKRPVKVQPIARIWYKGQQKQVQHACPSPIIALINTDNGAGVPDIGG
                     LENYDADNIQHRFKPQAQPLRLIIPRLHLYVAD"
     gene            complement(9461..10864)
                     /gene="fumC"
                     /locus_tag="MOX77_002217"
     CDS             complement(9461..10864)
                     /gene="fumC"
                     /locus_tag="MOX77_002217"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HCA3357739.1"
                     /translation="MVTVRREKDSMGVIEVPADKLWGAQTQRSLEHFRISTEKMPVSL
                     IHALALTKRAAAKVNQDLGLLAAEKASAIIEAADEVLAGKHADEFPLAIWQTGSGTQS
                     NMNMNEVLANRASEILGGVRGMERKVHPNDDVNKSQSSNDVFPTAMHVAALLALREHL
                     IPQLSALTDTLRDKSHAFADIVKIGRTHLQDATPLTLGQEISGWVAMLEHNLRHIEHS
                     LPHVAELALGGTAVGTGLNTHPEYARRVAEELATITAAPFVTAPNKFEALATCDALVQ
                     AHGALKGLAASLMKIANDVRWLASGPRCGIGEIAIPENEPGSSIMPGKVNPTQCEAVT
                     MLCCQVMGNDVAINMGGASGNFELNVYRPMVIHNFLQTVRLLADGMASFNQHCASGIE
                     PNRERITQLLNESLMLVTALNTHIGYDKAAEIAKKAHKEGLTLKASAVALGYLSDAEF
                     DAWVRPELMVGSMTPGR"
     gene            complement(11032..12678)
                     /gene="fumB"
                     /locus_tag="MOX77_002218"
     CDS             complement(11032..12678)
                     /gene="fumB"
                     /locus_tag="MOX77_002218"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000066594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I fumarate hydratase"
                     /protein_id="HCA3357740.1"
                     /translation="MSNKPFFYQDPFPLKKDDTEYYLLTSEHVSVAEFEGQEILKVAP
                     EALTLLARQAFHDASFMLRPAHQQQVADILRDPQASENDKYVALQFLRNSDIAAKGVL
                     PTCQDTGTAIIVGKKGQRVWTGGGDEAALARGVYNTYIEDNLRYSQNAALDMYKEVNT
                     GTNLPAQIDLYSVDGDEYKFLCIAKGGGSANKTYLYQETKALLTPGKLKNYLVDKMRT
                     LGTAACPPYHIAFVIGGTSAEANLKTVKLASAKYYDALPTEGNEHGQAFRDIELEKEL
                     LLEAQNLGLGAQFGGKYFAHDIRVIRLPRHGASCPVGMGVSCSADRNIKAKINREGFW
                     IEKLERNPGKYIPEALRQAGEGEAVRVDLNRPMSEILQQLSQYPVSTRLSLNGTIIVG
                     RDIAHAKLKERMDRGEGLPQYIKDHPIYYAGPAKTPEGYASGSLGPTTAGRMDSYVDQ
                     LQSQGGSMIMLAKGNRSQQVTDACKKHGGFYLGSIGGPAAVLAQGSIKRLECVEYPEL
                     GMEAIWKIEVEDFPAFILVDDKGNDFFQQIQSSQCARCVK"
     gene            12878..14053
                     /gene="manA"
                     /locus_tag="MOX77_002219"
     CDS             12878..14053
                     /gene="manA"
                     /locus_tag="MOX77_002219"
                     /EC_number="5.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-6-phosphate isomerase"
                     /protein_id="HCA3357741.1"
                     /translation="MQKLINSVQNYAWGSKTALTELYGIANPQQQPMAELWMGAHPKS
                     SSRITTANGETVSLRDAIEKNKTAMLGEAVANRFGELPFLFKVLCAAQPLSIQVHPNK
                     RNSEIGFAKENAAGIPMDAAERNYKDPNHKPELVFALAPFLAMNAFREFSDIVSLLQP
                     VAGAHSAIAHFLQAPNAERLSQLFASLLNMQGEEKSRALAVLKAALNSQQGEPWQTIR
                     VISEYYPDDSGLFSPLLLNVVKLNPGEAMFLFAETPHAYLQGVALEVMANSDNVLRAG
                     LTPKYIDIPELVANVKFEPKPAGELLTAPVKSGAELDFPIPVDDFAFSLHDLALQETS
                     IGQHSAAILFCVEGEAVLRKDEQRLVLKPGESAFIGADESPVNASGTGRLARVYNKL"
     gene            14156..15664
                     /locus_tag="MOX77_002220"
     CDS             14156..15664
                     /locus_tag="MOX77_002220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdgA family protein"
                     /protein_id="HCA3357742.1"
                     /translation="MKKTLVAAGVVIALGIVWTGGAWYTGKKLENHLAEMVTQANEQL
                     KRTAPEAGVELSYQNYQRGVFSSHLQLVVKPVAGADNTWLKPGQSIVLDESVSHGPFP
                     LAQLKTLNLIPSMASVKTTLVNNDAAKPLFDIAKGDAPFVINTRIGYGGDTRSDISLK
                     PLNYENAGEKVAFSGGEFQLNADKDGNVVSLSGEAQSGLVDAVNEYNQKVQLTFNNLK
                     TDGTSKLASFGERVGDQKLTLDKLSIAIEGKEMAVLEGMEIAGKSDLVNDGKTINSQL
                     DYSLNSLKVQNQDLGSGKLTLKVGQIDGEAWHQFSQQYHAQTQALLNQPDVAQNPELY
                     QQKVTEAFFSALPVLLKGDPVLTLAPLSWKNAKGETTLNLSLFLKDPATTTAQPQTLA
                     QEVDRSVKSLDAKLAIPMDMAVEFMTQIAKLEGYQQDDAEKLAKQQVQGLSAMGQMFR
                     LTTLKDNTIASSLQYANGQITLNGQKMPLEDFVGLFGMPALSVPDVPALPQQ"
     gene            15783..16003
                     /locus_tag="MOX77_002221"
                     /pseudo
     CDS             15783..16003
                     /locus_tag="MOX77_002221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310356.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIB"
     gene            16013..16144
                     /locus_tag="MOX77_002222"
                     /pseudo
     CDS             16013..16144
                     /locus_tag="MOX77_002222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000459379.1"
                     /note="catalyzes the formation of homocysteine and
                     pyruvate from cystathionine; also acts a a negative
                     regulator for the mal regulon but interacting with the
                     transcriptional activator MalT; internal stop; incomplete;
                     partial in the middle of a contig; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
     gene            16370..17371
                     /gene="add"
                     /locus_tag="MOX77_002223"
     CDS             16370..17371
                     /gene="add"
                     /locus_tag="MOX77_002223"
                     /EC_number="3.5.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosine deaminase"
                     /protein_id="HCA3357743.1"
                     /translation="MIDITLPLTDIHRHLDGNIRAQTILDLGRQFNIALPAQTLETLI
                     PHVQVTSTEPDLVSFLTKLDWGVKVLASLDACRRVAFENIEDAARNGLHYVELRFSPG
                     YMAMAHQLPIAGVVEAVIDGVRDGCNTFGVEARLIGIMSRTFGEAACLQELDALLAHR
                     EKITALDLAGDELGFPGSLFLSHFNRARDAGWHITVHAGEAAGPESIWQAIRELGAER
                     IGHGVKAVEDRALMDFLAQQRIGIESCLTSNIQTSTVASLADHPLKTFLEHGVLASLN
                     TDDPAVQGVDIIHEYHVAAPAAGLSREQIRQAQINGLEIAFLSDSEKRALREKVAAA"
     gene            complement(17445..18485)
                     /locus_tag="MOX77_002224"
     CDS             complement(17445..18485)
                     /locus_tag="MOX77_002224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310359.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HCA3357744.1"
                     /translation="MNDKIRVGLIGYGYASKTFHAPLIMGTPGLELAAVSSSDETKVK
                     ADWPAVSVVSEPRHLFNDPHIDLIVIPTPNDTHFPLAKAALEAGKHVVVDKPFTVTLS
                     QARELDALARSTGRVLSVFHNRRWDSDFLTLKALLADGVLGEVSLFESHFDRFRPQVR
                     DRWREQGGPGSGIWYDLAPHLLDQAIQLFGLPVSMTVDLAQLRPGAQSTDYFHAILSY
                     PQRRVILHGTMLAAAESARYIVHGSRGSYVKYGLDPQEERLKNGERLPQEDWGYDMRD
                     GVLTLVEGETRKEENWLTLPGNYPAYYAAIRDALNGNGENPVPASQAIQIMELIELGM
                     ESAKHRATLCLA"
     gene            18693..18818
                     /gene="blr"
                     /locus_tag="MOX77_002225"
     CDS             18693..18818
                     /gene="blr"
                     /locus_tag="MOX77_002225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division septum protein Blr"
                     /protein_id="HCA3357745.1"
                     /translation="MNRLIELTGWIVLIISVILLGIANHIDNYQPPEPTASVQKK"
     gene            19117..19332
                     /gene="ydgT"
                     /locus_tag="MOX77_002226"
     CDS             19117..19332
                     /gene="ydgT"
                     /locus_tag="MOX77_002226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460424.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription modulator YdgT"
                     /protein_id="HCA3357746.1"
                     /translation="MTVQDYLLKFRKISSLESLEKLFDHLNYTLTDDMDIVNMYRAAD
                     HRRAELVSGGRLFDVGQVPQSVWRYVQ"
     gene            19421..19861
                     /locus_tag="MOX77_002227"
     CDS             19421..19861
                     /locus_tag="MOX77_002227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2569 domain-containing protein"
                     /protein_id="HCA3357747.1"
                     /translation="MTTTPPQRIGGWLLGPLAWLLVALLSASLALLLYVMALATPQTF
                     KTLSGQETGNLLLWGISFITAIAMWYYTLWLTIAFFKRRRCVPKHYIIWLLVSVLLAV
                     KAFAFSPVSDAFAVRQLLFPLLATALIVPYLKRSARVKTTFVNP"
     gene            19938..20519
                     /gene="rsxA"
                     /locus_tag="MOX77_002228"
     CDS             19938..20519
                     /gene="rsxA"
                     /locus_tag="MOX77_002228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017456621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxA"
                     /protein_id="HCA3357748.1"
                     /translation="MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLA
                     TTFVMTLASICAWLIDTWILIPLDLIYLRTLAFILVIAVVVQFTEMVVRKTSPALYRL
                     LGIFLPLITTNCAVLGVALLNINLGHHFLQSALYGFSAAVGFSLVMVLFAAIRERLAV
                     ADVPAPFRGNAIALITAGLMSLAFMGFSGLVKL"
     gene            20519..21097
                     /gene="rsxB"
                     /locus_tag="MOX77_002229"
     CDS             20519..21097
                     /gene="rsxB"
                     /locus_tag="MOX77_002229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxB"
                     /protein_id="HCA3357749.1"
                     /translation="MNTIWIAVGALTLLGLVFGAILGYASRRFAVEDDPVVEKIDAIL
                     PQSQCGQCGYPGCRPYAEAVGLQGEKINRCAPGGEAVMLKMAELLNVEPQPCDGEEQQ
                     AAPVRMLAVIDENNCIGCTKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTH
                     CIELRPVNETPDSWKWDLNTIPVRIIPVEQHA"
     gene            21090..>22713
                     /gene="rsxC"
                     /locus_tag="MOX77_002230"
     CDS             21090..>22713
                     /gene="rsxC"
                     /locus_tag="MOX77_002230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxC"
                     /protein_id="HCA3357750.1"
                     /translation="MLKLFSAFRKDKIWDFDGGIHPPEMKSQSNGTPLRQVPLAPRFV
                     IPLKQHIGAEGELCVSVGDRVLRGQALTRGRGRMLPVHAPTSGTVIAIAPHSTAHPSA
                     LAELSVIIDADGEDRWIEREGWSDYRAHSREALIERIHQYGVAGLGGAGFPTGVKLQG
                     GDDKITTLIINAAECEPYITADDRLMQDCAAQIVEGIRILAHILQPREVLIGIEDNKP
                     QAISMLRAVLADAHDISLRVIPTKYPSGGAKQLTQILTGKQVPHGGRSSDIGVLMQNV
                     GTAYAVKRAVVDGEPITERVVTLTGEAISRPGNVWARLGTPVRHLLNDAGFCPSADQM
                     VIMGGPLMGFTLPWLDVPVVKITNCLLAPSVTEMGAPQEEKSCIRCSACADACPADLL
                     PQQLYWFSKGQQHDKATAHHIADCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEE
                     KRAAEAKARFEARQARLEREKAARLARHKSAAVQPAAKDQDAIAAALARVKEKQAQAT
                     QPVVIQAGSLPDNSAVIAAREARKAQARAKQAA"
BASE COUNT         5279 a         6036 c         5870 g         5528 t
ORIGIN      
        1 gttttcgtct taactcccac ctataccagc tatgtatttt taacaaaaca aagaggatat
       61 ttttcatgca aattggctac attcgtgtgt caacaaatga ccagaataca gatttacaac
      121 gaaacgcact gaactgcgca ggatgtgaac tgatttttga ggataaaatc agcggaacaa
      181 agtcagcccg accgggattg aaaaagctgc tcagaacgtt atcagaagga gatacgctcg
      241 ttgtctggaa gctggacagg ctgggcagaa gcatgaaaca cctcatcact cttattgagg
      301 aactgcggga aaaaggggtt aacttccgta gtcttacaga cagcattgat acgtcaacac
      361 ccatgggacg tttctttttt cacgtcatgg gggctttagc ggaaatggag cgtgaattaa
      421 tagttgaacg aacactggcc ggacttgaag cagcacgtgc acaggggcgt attggtggac
      481 gtcgtccgaa actgacaaaa gagcaacatg aacaaatagc aaggctgatc aaaaatggct
      541 atagcaggaa acagttggca attatttacg atatcggtat atcgacgatt tatcgttatc
      601 accctgtaga ggaacttcaa actcaagctg agttgtaatt ctttttctga tattgaaatg
      661 ccgcggcgat gtaatttatc tcacggaaat aggtacgttt atcgcgcggc gcatcaatca
      721 ggctttctcg cgggatgcca gttccgtcaa atatcgcgat gaatctcact tttcgctttt
      781 ttggcgataa atcttatcca ggccgttgca tgcggtccct tctctccgta aaatcccgcg
      841 ccttagtggc tttcaccatt tttatgcgtt ttgccataat aattattctt ccaatttcat
      901 ttttatagct ggataccaat ggaaaaaaaa ctgggactga gcgcgctgac cgcgctggtt
      961 ttaagctcaa tgcttggcgc aggtgttttc agtctgcccc agaatatggc cgccgttgcc
     1021 agtccggctg cgttgttaat tggctgggcc attaccggcg tggggatact cctactggca
     1081 ttcgccatgt taatccttac gcgcattcgc tccgagcttg acggcggcat ctttacttac
     1141 gcccgcgaag gcttcggcga actgattggc ttttgttctg cctggggcta ttggctgtgc
     1201 gcggtcatcg ccaacgtatc ctatttggtt atcgtctttt cagcgctgag tttctttacc
     1261 gatacgcctg ccctgcgtct gtttggcgac ggtaatacct ggcaggctat tgtcggcgct
     1321 tcagtcctgc tctggattgt ccatttcctc atcctgcgcg gcgtacaaac ggcagccagc
     1381 atcaatctgg tcgcgactct ggcgaaactg ttaccgctcg gcgcgtttat tgtgctggct
     1441 atcatgatgt tcaaactgga taccttcaca ctggacttca ccggtgttga gctcggtatt
     1501 cccgtatggg aacaggtcaa gaacaccatg cttattacgc tgtgggtgtt tattggcgtt
     1561 gaaggcgccg tcgtcgtctc ggcccgagcg aaaaataaac gcgatgtagg ccgcgccacg
     1621 ctactggcgg tactcgcagc gctgggaata tatctcctgg tcacgctgct ttctcttggc
     1681 gttcttgcgc gtccggaact ggcggagatg cgcaacccgt cgatggccgg tctgatggtg
     1741 aaaatgatgg ggccgtgggg agaaattatt attgcagcgg gactgattgt gtctgtctgc
     1801 ggggcttatc taagctggac tatcatggcg gcagaggtgc cgtttctggc ggcagcctat
     1861 aaatccttcc cgggcatctt cgcgcgacaa aatgcgcaag gcgcgccttc tgcgtcgtta
     1921 tggctcacca acatctgtgt gcaaatctgt ctggtgctga tctggctgac cggttcggac
     1981 tacaacacac tattgacgat tgcgtcagaa atgattctgg tgccctactt tctggtcggc
     2041 gcatttctgc tgaagattgc aacgcgtccc ctccatcggg cggtcggtat cggagcctgt
     2101 atttatggct tatggttatt atatgcgtcg ggccctatgc acctgctgct gtccgtcgta
     2161 ctgtacgcgc ctggattact ggttttcctg tatgcgcgtc ggacgcacaa gcatgacaat
     2221 gtattaaatc gtcaggaagt cgtgctgatt ggtttattgc tggtcgcggc ggttccggct
     2281 acgtggatgc tggtgggtta acaacctccc tatcgtaata tccgtctgta ttacgatggg
     2341 gaaaccacgg tctttgccaa tattaatgcc atttaatcca gcaaaaaatc agcagccacg
     2401 cgcttagccc ccagcagacc accgcaccgc caagcgcgac gggcaggcgc atcacgccgc
     2461 tgaaatacca tagcgttgca agataaatga aataaggaat gatcgaccac atgctaaaga
     2521 cgatggtggt acgcatcgcg tcgatgcccc gctcgctagc cacgatatag tgcgcgataa
     2581 gcgcaaacgt tggaaacaga ggaattaatc cggcgatata ataatttttt gtttttgaca
     2641 gcagaccaat caatacgacg accagcgccc ccagggcagc tttaatcacg agtcccatta
     2701 ccttgcctta acatgctaat aacaacagca tgtagcataa cggaaccgct ctcgtttaga
     2761 aaagatttat ggaagggaaa acagaggagg tgtatgttgg cgttttctat tctccattta
     2821 taatatgaac cgcattgtat ttgttgaaga cgacgctgaa gtgggttctc tcattgccgc
     2881 ttatctggcg aaacatgata ttgatgtcat tgttgagccg cgtggtgacc gggcggagga
     2941 tcttatcctc atcactcagc ccgatctggt tttactggat attatgcttc caggtaaaga
     3001 tggcatgacg atatgccgcg atttacgcca ccgctggcaa ggtccgattg tcctgctcac
     3061 ctcgctggac agtgatatga atcatattct ggcgctggag atgggcgcct gcgactacat
     3121 cctcaaaacc acgcctccgg ccgttttgct ggcgcgtctg cgcttacacc tgcggcaaag
     3181 cgaacaaacg caacaggcaa aaagtcttca ggagagcgcg cttacgccgc ataaagcgct
     3241 gcgttttggc gcgttaacca tcgatcccct taaccgggcg gtccagctca atggcgattt
     3301 catatcgctc tccaccgccg attttgaatt gctctgggaa ctggcgacac acgccggaca
     3361 aattatggat cgcgacgcgt tgctaaaaac gctgcgcggc gttaattatg atggtctgga
     3421 tcgcagcgtg gatgtggcga tttcccgcct gcgtaagaaa ctgctggata gcgctgctga
     3481 gccctatcgt ataaagacca ttcgcaataa aggctatctt tttgcccctc atgcctggga
     3541 cgaaacgacg ggataagtga gtcgacagat tttacctgcc tttatcaagt catagtggcg
     3601 atgctcatca ccgccactgt tcaaaaaaca gacaccgtat acatcagtgc tatttttatt
     3661 agtcggaaca gcccctttat taccgttttc tctgcgttgc ggttcatgat tacgtctttt
     3721 tcgctcaaga aaattaaatt aaaaaaaact cgaagccagt tcacaaaatt gataacagaa
     3781 tgtctgcccg ccgctatatt gccatctttt ttcgcaaatt gtgaaatcaa acaaatcaca
     3841 accatgaata tataataaca aacatattca ccataaatat atgcgtttcc gatagtaact
     3901 tttgtattaa ttaataacat ataagaaaag ttagcatttg ctgaaataat attattcaga
     3961 ttaggatgcc tttgattcaa cgaatctgta gaagttcaat cttttgcaaa taagttaagt
     4021 ttttaaggat aaaaaaatga aaagaaaagt attggcactt gtcatcccgg ctctgctggc
     4081 tgctggcgca gcacacgccg ctgaaattta taacaaagac ggcaacaaac tggaccttta
     4141 cgggaaagta gacggcctgc actatttctc tgatgactct tctaaagatg gcgatcagac
     4201 ctatatgcgt gtcggcttta aaggcgaaac gcagattaac gaccaactga ccggttacgg
     4261 ccagtgggaa tataacgttc aggctaacac taccgaaggc gaaggcgcga actcctggac
     4321 tcgtctggca ttcgccggtc tgaaattcgg cgactacggc tcattcgact atggtcgtaa
     4381 ctacggcgtc ctgtacgacg tggaaggctg gaccgatatg ctgcctgagt tcggcggcga
     4441 ctcctatact tacgctgaca actacatgac cggtcgtgct aacggcgtgg ccacctaccg
     4501 taacactgat ttcttcggtc tggtagacgg tctgaacttc gcgttgcaat atcagggtaa
     4561 aaatgaaagc caaagcgctg acgatgtaaa tatcggtacc aataaccgta ataatggcga
     4621 cgatattcgt tacgataacg gtgatggctt cggtatttct actacctatg atattggcat
     4681 gggcttcagc gcaggcgctg cgtataccac ttccgatcgt actaatgagc aagtcaatgc
     4741 tggcggcacg attgctggcg gcgacaaagc ggatgcatgg acagctggct tgaaatatga
     4801 tgccaacaac atctatttag cgactatgta ttctgaaacc cgtaatatga cgccttatgg
     4861 taaaacggac aagggttatg atggcggcgt agcaaacaaa acgcaaaact tcgaagttac
     4921 agcccaatat caatttgatt tcggtctgcg cccggcggtt tctttcctga tgtctaaagg
     4981 taaagatctg acctataaca acgttaatgg cgatgataaa gacctggtta aatatgctga
     5041 tgtaggtgct acctactatt tcaacaaaaa cttctccacc tatgttgatt ataaaatcaa
     5101 cctgctggat gacgacgacc cgttctataa agatgccggt atcagcactg atgatatcgt
     5161 cgcgctgggt atggtttacc agttctaatt attcattaat tcttctcaag cccgccgttt
     5221 cggcgggctt ttctttttct atcaccaccg ttctaaaaac agaacgcact gttccctggg
     5281 cacagattga acaattcttg ttcgctctct atggtttgct tatctcccga caaaaggaac
     5341 atgctaatga tcagtctcgt cccgcctctg ctttccagaa ccgcgcttct ctttctgctc
     5401 acggccacag gcgcagccac cgccgcccgc ccggcagcgg atattatttt gcataacggt
     5461 aatatcatca ctctgaatga tgcccagccg caggccagcg cgctggcgat ttccggctcg
     5521 cggattgtgg cgattggcga tgatacggcg acaaatgaat ggcgcggcga ccatacccgt
     5581 accatcgatt tacagggtaa aaccgtgata cccggcctga ccgataccca tattcacgcc
     5641 attcgcggcg gacaaacctg gacattcgaa acctactggt acgacagccc ttcgcttaaa
     5701 gacgcgctgg ataaattacg cgccgacgct aaccgtcgtc cccacgatca atgggtagcc
     5761 gtagtgggat catggatacc ggcgcaattt gcagaaaacc gggcgtcgac ggtagccgaa
     5821 ctgagccacg cccttcccga tcatccggct tatattcagt atctttacga ctatgcgtta
     5881 gtgaatcagc gcggtataga cgtacttggc cttaacgaca cccctcctcc tgatttagcg
     5941 ggaatccgcg tagagcgcga cgcaaaaggt agcgccacgg ggaaattatt tggtgacatc
     6001 gccgcgttta accagctttt tgccagcata agtagtaacg ccgatcgcga gggcggtctg
     6061 cgacaatttt tcgctgatat gaacgctcgc ggcgtgaccg gcatcattga cccctctgcc
     6121 gggcctgccg ccgcttatga gcctttattt gcaatgcgaa accaggggga tttaccgctg
     6181 cgcgtggggt atcgcattcc ggtacagccg gaagcgaaag gtcatgaagc gcagtggttc
     6241 agcaacctga tggcctttcg cccggcgcgt gccgacgacg ggcaactggc ttttcttggc
     6301 ctgggggaaa gcctggtggc aggaatgaat gacggcgtgc ggatggcccc agggttttct
     6361 tcctcagagc aggacaaaac cgcgcttcgc caggtcgcga cgtttgcggc aaaacgggga
     6421 ataccgcttg agatccacgc ctataccgat gacagcgccg acgcgatatt gacgattttt
     6481 gagcaggtag cgcagcagta cgatctgcgc cctctccgct ggtctattgc gcatctgaat
     6541 accggttcgc cacagacact tgagcgaatg cgtaagctgg gtctggcata cactgtgcaa
     6601 atggggcctt actttgaggg gcttgccatc cgtgacgcca acccacccgg tgcgacggac
     6661 aattcgccgc cggttcgact ggcgctggat aaagggcttg tcgtagctgg cggcaccgat
     6721 tcgacgcgta ttggcattgc cggtgtctgg cacgctatcg aatatcatat caccggtata
     6781 gcgtcaggcg gttccgtgcg taaacccgcc agcgagcggc tcacgcgtct ggaagcgcta
     6841 gcgttatata cacgtcatgc cgcctggctc gcctttgccg aacaacaccg gggccagctt
     6901 agcgtcggaa aacaggccga tctggcggtg ctcaatcagc cctttatgac gatgccggaa
     6961 gacagaattg ataccattcg cgctgttttg acgcttgtcg atggacgcat tgttcacgaa
     7021 agtccggacc ttaacgccgg acaatgaggt tgtcagttga cgcaaagcct gcttttataa
     7081 cccaccagcg gcgctgacgg gaaatctttt ccgtcagcgc gcgatagagc taatgtattg
     7141 agatccggtg ggcgttgatg aaaaagctgt ttgtgcagtt ttaccttttg ctgttcgtct
     7201 gttttctggt catgacctta ttggtcggac tggtgtacaa attcactgcc gaacgcgcgg
     7261 gcaggcaatc gctcgacgat ctgatgaaaa gttcgctcta tctgatgcgc agcgaactgc
     7321 gggaaattcc gccgcgtgaa tgggggaaaa cgttaaaaga gatggacctg aacctctctt
     7381 tcgatttacg cgttgaaccg ttaaatcact ataagcttga tgccgccacc acgcagcgac
     7441 tgcgtgaagg cgatattgtc gcgcttgacg atcaatacac ctttattcag cgtatcccgc
     7501 gcagccatta cgtcctggcg gttggcccgg ttccctatct ctatttcctg catcaaatgc
     7561 gactgctgga tatcgcctta atggcgctca ttgccttttc tctcgccttt cctgtgttta
     7621 tctggatgcg cccgcactgg caagaaatgc tcaggctcga atccgccgcg cagcgctttg
     7681 gcgagggtca tttgactgaa cgcctgcatt tcgataatgg ttccagtttc gaacgtctgg
     7741 gcgtcgcgtt caaccagatg gcggataaca ttaatgctct gatcgccagt aaaaaacagc
     7801 tgattgacgg tatcgcccat gagcttcgca cgccgctggt acgtttacgc tatcggcttg
     7861 aaatgagtga aaatctgact ccgccggaat cacaggcgct caatcgcgat attggtcaac
     7921 tggaagcgct gattgaagaa ctgctcacct atgcgcgcct tgaccgacca caaaatgaac
     7981 tgatgttgac caaacccgac ctccccgcct ggttgttcgc gcatttgcag gatgtgcaga
     8041 gcgtgaaccc ggaacgcgcc gtaaatcttc tcacatgtgt aatcggcgat tatggcgcgc
     8101 ttgatatgcg gttaatgtcg cgagtgctgg ataacctgct gaataatgcg ttgcgctaca
     8161 gccgtaccac cgttcaggtc agtctgttac ttgacggcag tcaggcaacg ctgatagtcg
     8221 aagatgatgg ccccggcatt gaagcggatg cgcgagagcg cgtatttgaa ccttttgtca
     8281 gactcgaccc cagtagagac cgggcgacag gcggctgcgg gcttggactc gccatcgtac
     8341 actctatcgc tctggcgatg ggcggtagcg tcgtctgtga cgatagcgaa ctgggcggcg
     8401 caaaatttag ctttcgctgg ccggtctggc acgcgatgcc cgacatgacc gcggcctgac
     8461 gtattttgca cgctggttga gccgcgggaa ttgtgctata cagatagtat gttgtaacta
     8521 aagtgagtga taccatgtcc cgctacgatc tcgttgaacg cctgaatggc acttttcgcc
     8581 agatagaaca acacctggcg gcgctgtcgg ataatctaca gcagcattcg ctacttatcg
     8641 ctagtgtctt ttcactgccg caggtgacca aagaggcgga acatgcgccg ctggacacta
     8701 tcgaggtcac gcaacatctg gggaaagagg ccgaagcgct ggcgctacgt cactatcgcc
     8761 atttgtttat tcaacagcag tccgaaaacc gcagcagtaa agccgccgtc cgcctgcctg
     8821 gcgttttatg ctatcaagtg gataatgcga cacagttaga tctggaaaat caggtacagc
     8881 gcattaacca gttgaaaacc accttcgagc agatggttac ggtagagtcc ggtcttccct
     8941 cagcggcacg ttttgagtgg gtgcatcggc atctacccgg cttaattacg ctgaacgctt
     9001 accgcacgct gacgcttatc aataaccccg ccaccatacg tttcggttgg gcaaataaac
     9061 atattattaa aaatttaagc cgggatgagg ttctgagcca gttgaaaaaa agcctcgcgt
     9121 cgccgcgcag cgtcccgccg tggacgcgcg aacaatggca attcaagctg gaacgggaat
     9181 atcaggatat cgctgcctta ccgcagcagg ccaaactcaa gattaagcgc ccggttaagg
     9241 tacagccgat cgcccgcatc tggtataaag gccagcagaa acaggtgcaa cacgcctgcc
     9301 cctcgccgat tatcgcatta atcaacacgg acaacggcgc tggcgtgccg gatattggcg
     9361 ggctggaaaa ctatgacgcc gataatattc agcaccgttt taaaccacag gcgcagccgc
     9421 tgcgactgat tattccgcga ctgcacctgt atgtggcgga ttaacgtccc ggcgtcatac
     9481 tgccaaccat taactccgga cgtacccagg cgtcgaactc cgcgtcgcta aggtatccta
     9541 atgccacggc tgaggctttg agcgtcagcc cttctttatg cgccttcttc gcaatctccg
     9601 ccgctttatc gtaaccgatg tgcgtattga gcgcagtgac cagcatcagc gactcattca
     9661 gcaactgcgt aatacgctcg cggtttggct cgattcctga cgcacagtgt tgattgaaac
     9721 tcgccatgcc atcggccagc aggcgcaccg tttgcagaaa attatgaata accatcggac
     9781 gatagacgtt gagctcaaag ttgcccgatg cgccccccat attgatggcc acatcgttac
     9841 ccattacctg gcaacatagc atcgttaccg cttcacactg ggtcgggttc actttaccag
     9901 gcataatgga actgcctggc tcattctccg ggatagcaat ctcgccaatg ccgcagcgcg
     9961 ggccggatgc cagccagcga acatcgttgg cgattttcat cagcgaggcc gccagtcctt
    10021 ttaatgcgcc atgcgcctgt accaacgcgt cacaggtcgc cagcgcttcg aatttattcg
    10081 gggcggtaac aaacggcgcc gcggtaatgg tcgccagttc ctcggccacg cgccgggcat
    10141 attccgggtg ggtattaagc cctgtcccta ctgcggttcc gccgagcgcc agttccgcga
    10201 cgtgcggtaa actgtgctca atgtgtctga ggttatgttc cagcatggct acccaaccgg
    10261 aaatctcctg gcctaaggtg agcggcgtcg cgtcctgcag gtgagtacgc ccaattttga
    10321 caatatcggc gaaagcgtgg gatttatcgc gaagcgtatc cgttaatgcg gataattgcg
    10381 ggataaggtg ttcgcgtaac gccagtaacg ccgccacgtg catggcggtt gggaacacat
    10441 cgtttgagct ttgactctta ttgacgtcat cattgggatg cactttgcgt tccataccgc
    10501 gaacgccgcc caaaatttca ctggcgcggt tcgctaacac ttcattcata ttcatgttgc
    10561 tttgcgtacc ggacccggtc tgccaaatcg ccagcggaaa ctcatcagca tgttttcccg
    10621 ccagcacttc atcagctgcc tcgataatcg cgctggcttt ttccgccgcc aacaacccta
    10681 agtcctggtt gaccttcgca gcggcgcgct tggtcaacgc cagagcgtga atgagcgaga
    10741 cgggcatttt ctccgtggaa atccgaaaat gctccagcga acgttgcgtt tgcgcccccc
    10801 acagtttatc tgccgggact tcaatcacgc ccattgaatc tttctcgcgg cgtaccgtta
    10861 ccattacctg ctccttactc aagttgatga gatcatgtgt cgacattgct cacatgtttg
    10921 cggtcttatg agtattaacg ataacaacac aacggtgtag accggataag gcgcttgcgc
    10981 cgttctccgg caaaatagcg aatcatgtta ccgccccgca gggcggcgac attacttaac
    11041 gcagcgcgcg cactgcgatg actgaatctg ctggaagaaa tcgttacctt tatcatccac
    11101 cagaataaag gccggaaaat cctccacttc aattttccag atagcctcca tacccagttc
    11161 aggatattcc acacactcca ggcgcttgat actgccctgc gccagaacgg ctgccgggcc
    11221 gccgatactg cccaggtaga agccgccatg tttcttacag gcatcggtca cctgctggct
    11281 gcggttgcct ttcgccagca tgatcatact gccgccctgc gactggagct gatcaacata
    11341 agagtccatc cgtcctgcgg tagtcggccc aagcgacccg gaggcgtacc cttccggcgt
    11401 ttttgccggc cccgcataat agataggatg atctttgatg tactgcggca aaccttcgcc
    11461 tctgtccatc cgttctttca gtttagcgtg cgcgatatcg cggcccacaa taatcgtgcc
    11521 gttcagcgac aagcgcgttg ataccggata ctgcgacagt tgttgcagta tctcgctcat
    11581 gggacggtta agatcaacgc gcaccgcctc gccctctccc gcctggcgca gcgcctctgg
    11641 aatatattta ccgggattgc gctccagctt ctcgatccag aacccttccc ggttgatctt
    11701 cgctttaatg tttcgatccg cggagcagga cacgcccata cctaccggac acgatgcccc
    11761 atggcgcggc aatcggatga cacgaatatc gtgagcgaaa tatttgccgc cgaactgcgc
    11821 gcctaagcca agattttgcg cctcaagcaa caattctttt tccagctcaa tatcgcggaa
    11881 ggcctgcccg tgttcattgc cttcggtcgg tagcgcatca tagtattttg ccgaggccag
    11941 cttaacggtc ttcaggttcg cttccgccga ggtaccgcca atgacaaacg caatgtgata
    12001 cggcggacag gcggcggtgc ccagcgtacg catcttatcg acgagataat ttttgagctt
    12061 acccggcgtc agtagcgctt ttgtctcctg atagaggtag gttttattcg ccgaaccgcc
    12121 gcctttagcg atacagagga atttatattc atcgccatcg acgctgtaga gatcgatctg
    12181 cgccggcagg ttagtaccgg tattgacctc tttgtacata tccagcgccg cgttctgcga
    12241 atagcgcagg ttatcttcga tataggtgtt atatacgccg cgagccagcg ccgcttcatc
    12301 acctccacca gtccagacgc gttggccttt tttgccgaca ataatggccg taccggtatc
    12361 ctggcaggtg ggcaacacgc ccttggccgc gatatcggag tttcgcagga attgcagcgc
    12421 gacatatttg tcgttttcac tggcctgcgg atcgcgcaga atatccgcca cctgctgctg
    12481 atgcgcggga cgtagcataa aagacgcatc gtggaaggcc tgacgcgcca acaacgttag
    12541 cgcttccggc gcgactttca ggatctcttg tccttcgaac tcggcgacgg aaacatgttc
    12601 gctggtcaac aagtagtact cggtatcgtc ctttttgagg ggaaaagggt cttgataaaa
    12661 gaagggtttg tttgacattg tgctctcact taccgctcgg tatggttatt ctctgggcag
    12721 gtgttccatt gcccgactca aagcgagtta cactatccta cacaattttt taacaaaaac
    12781 tgagacaagt acgacttttt acgcccggag gttacttcat gcgggtttct tggtttaata
    12841 cctcccattg atctccacat tgaaacaggg cttgataatg caaaaactca ttaactcagt
    12901 gcaaaactat gcctggggaa gtaaaactgc gttaacggaa ctttatggca tcgccaatcc
    12961 gcagcagcag ccaatggctg aactctggat gggcgcgcat cccaaaagca gctcgcgaat
    13021 caccaccgcc aacggcgaaa ccgtctccct gcgtgacgcc atcgaaaaga ataaaaccgc
    13081 catgctgggc gaagcggtag ccaaccgttt cggcgaactg ccgtttctgt ttaaagtact
    13141 gtgcgccgcg cagccgctct ctattcaggt gcacccgaat aagcgcaatt ccgaaatcgg
    13201 tttcgcgaaa gaaaatgcgg cgggtatccc catggatgcc gcagagcgga actataaaga
    13261 tcctaaccat aaaccagagc tggtttttgc cctggcgcct ttcctggcga tgaacgcgtt
    13321 ccgcgaattt tctgacattg tctctttact gcaacctgtc gccggcgcgc attccgctat
    13381 cgcccacttt ttgcaggcgc cgaatgctga acgtctgagc cagcttttcg ccagcctgtt
    13441 gaatatgcaa ggcgaagaaa aatcccgcgc gttagccgta ctcaaagcgg cgcttaacag
    13501 ccagcaaggc gaaccgtggc aaacgatccg cgtgatttca gagtattatc ctgacgacag
    13561 cgggcttttc tctcctttgt tgctgaatgt ggtcaaactg aatcccggcg aggcgatgtt
    13621 cctgtttgcc gaaacgcctc atgcttatct gcagggcgtt gcgctggaag tcatggcgaa
    13681 ctccgataac gttctgcgcg ctggccttac gccaaaatat atcgacatcc ctgagctggt
    13741 cgcgaacgtg aagttcgaac ctaagcctgc cggcgagttg ctgactgccc cggtgaaaag
    13801 cggcgcggag ctggacttcc caattccggt tgacgatttt gctttttcac tgcacgacct
    13861 ggcgcttcag gagacgagca tcggccaaca cagcgccgcg attctgttct gcgttgaggg
    13921 tgaggcggtg ttacgtaaag atgaacagcg tctggtactg aagccgggtg aatctgcctt
    13981 tatcggcgcg gatgagtctc cggttaacgc cagcggcacg ggccgtttag cgcgtgttta
    14041 taacaagctg tagcaacgta ctgaattttt taacaactct tgctaagctt ataacagacg
    14101 taaaactcct ccaggcggtt taatccgcct ggtttcattt ttatggacaa ttgatatgaa
    14161 aaaaacactg gtagctgcag gtgtagtaat tgcacttggc atcgtctgga caggcggcgc
    14221 ctggtatacg gggaaaaagc tggagaacca tcttgcagaa atggtgactc aggccaatga
    14281 acagctcaag cgtactgcgc cggaggccgg tgtcgaatta agttatcaaa actaccagcg
    14341 cggcgtgttc agtagccatc tgcaactggt tgtcaaaccg gttgccggcg cagacaatac
    14401 ctggttgaag cccgggcaaa gcattgtgct ggacgagtcc gtttcacatg gccccttccc
    14461 gctcgcccag ctcaaaacgc tcaatctgat cccttctatg gcgtcggtaa aaaccactct
    14521 ggtgaataac gatgcggcaa aacccctctt tgatattgcg aaaggcgacg cgccctttgt
    14581 tatcaatacc cgcattggtt atggcggcga tacccgctcc gatatctctc tcaagccgtt
    14641 aaactacgag aatgccggtg aaaaggtcgc ctttagcggc ggcgagttcc agcttaacgc
    14701 cgataaagac ggtaatgtgg tttcgctgtc gggcgaagcg cagagcggcc tggtcgatgc
    14761 cgttaacgaa tataatcaga aggtacaact cacctttaat aatttgaaaa cagacggtac
    14821 cagtaagctg gcaagctttg gcgagcgtgt aggcgaccaa aagttaacgc tggataaact
    14881 gtccatcgcc attgagggta aagagatggc ggtgctggaa gggatggaaa ttgccggcaa
    14941 gtccgatctc gtcaacgacg gaaaaaccat taacagccag ttggattact cgcttaacag
    15001 cctgaaagtg cagaatcagg atttgggcag cggtaaatta acgctgaaag tcggtcaaat
    15061 cgacggcgaa gcctggcacc agtttagtca gcaatatcat gcgcaaacgc aggcgctgct
    15121 gaatcagccg gacgtggcgc agaatcctga gctttatcag caaaaagtca ctgaagcgtt
    15181 ctttagcgct ctccccgtgc tgttaaaagg cgatccggtt ctgaccctgg cgccgcttag
    15241 ctggaaaaac gccaaagggg aaaccacgct gaatctgtcg ctgttcctca aagatccggc
    15301 aaccacaacg gcacaaccgc aaacgctggc acaggaagtc gaccgctccg tgaaatcgct
    15361 ggatgcgaaa ctggcaattc cgatggacat ggcggtcgag tttatgacgc agatagcaaa
    15421 actggaaggc tatcagcagg atgatgcgga aaaactggca aaacagcagg tgcaggggct
    15481 gtccgcaatg ggtcagatgt tccgactgac aacgctgaag gataatacta tcgcctccag
    15541 tttgcagtac gccaatggcc agatcacgct caacggacaa aaaatgccgt tggaagactt
    15601 tgtcggccta tttgggatgc cggcgctttc cgttccggac gttccggcgc tgcctcaaca
    15661 ataatcgcct tgccgggtgt cgcgacgctg cacccggtct gcgccgaacg acgcgcagcc
    15721 tctacttttg cgttaccagg cgagcggcta tcgtttgact ccgcacatgg tgctcgtcgt
    15781 gagcattagg cggcacggaa aacatcgtga gtctggacaa ctgcatcccc ccctacgcct
    15841 gtcagtgaaa gatatgtcgt ttgtcgatgt ccaggcattg aaggacaatc acgcgacagg
    15901 catcgtacag ctcaatcagc ataatttgca ggtaattatc ggcccgcagg ttcagtcggt
    15961 aaaagatgaa atggttggcc tgatgaatac cgttcaggca taaggaaggg atatgttcga
    16021 tttttcacag gaagttgacc gacgcgggac atggtgtacg tagtgggatt atgtcgccga
    16081 tcgttttggc gaagccgatc tgctcccctt tacgatctcg gatatggatt ttgccaccgc
    16141 gccgttcgct gataccgtct acaagcgggg ggttgaccct ttatcctgag aggcgataac
    16201 agagacaacc cccgtgagct gaccgggggc gcgttacaga gaatgataca aaatttctcc
    16261 cgcgctctcg cgaagttgca acgtaatgac tccgtttttg caaaatttcc agagcattat
    16321 caatctgtag tataatggtg cgcactttta ttaaaaattg agtgcgccca tgattgatat
    16381 tacgcttcct ttgactgaca tccaccgcca ccttgatggc aacattcgcg cccaaacaat
    16441 tctggatctt ggtcggcagt tcaacatcgc ccttcccgcc caaacgctgg aaacgctgat
    16501 tccgcatgtc caggtcacct caaccgaacc cgatttagta agctttctca ctaaactcga
    16561 ttggggggta aaagtcctgg catcgcttga cgcctgccgc cgtgtggcct ttgaaaatat
    16621 tgaagatgcg gcacgtaacg gcctgcatta cgtcgagctt cgcttttcgc ccggctatat
    16681 ggcgatggcg catcagttac cgatcgcagg cgtggttgaa gccgttatcg acggtgtacg
    16741 cgacggctgt aacacgtttg gcgtcgaggc acgactcatt ggcattatga gccgtacctt
    16801 cggcgaggcg gcatgtttac aggagcttga tgcgctgctg gcgcacagag agaaaatcac
    16861 cgcgctggat ttagccggtg atgagcttgg ctttcccggc agtctgtttt tgtcgcactt
    16921 taatcgggcg cgcgatgcgg gctggcatat taccgttcac gctggcgaag ccgcagggcc
    16981 ggaaagtatc tggcaggcga ttcgcgaact gggggccgag cgtatcggac atggcgtaaa
    17041 agctgtcgaa gatcgcgcgt taatggattt tcttgcacag cagcgtatcg gtattgaatc
    17101 ctgtctgacc tcgaatattc agaccagtac cgtcgcatcg ctggcggatc atccactaaa
    17161 aaccttcctt gagcatggcg ttctcgccag tcttaatacg gacgatccgg ctgttcaggg
    17221 cgtagatatt atccatgaat atcacgtcgc cgcgccagcg gcaggattga gccgcgaaca
    17281 gattcgccag gcgcagatta acggtctgga aatcgccttt ctgagcgata gcgaaaaacg
    17341 tgcgctacgc gaaaaagtgg ccgcggcgta agattgcttt attgacacta acgctcttct
    17401 ccgcctgcgg tttaatgcta tcccaggcgg agaaatgcga catctcaggc aagacacagc
    17461 gtcgcgcgat gttttgccga ttccatgccc agttcaatca actccataat ttgaatcgcc
    17521 tggcttgccg gcacgggatt ttcaccgtta ccgtttaacg catcgcggat ggcggcataa
    17581 tatgccggat agttacccgg caacgtaagc cagttctctt ctttgcgcgt ctctccctca
    17641 accagggtca atacgccgtc acgcatgtcg tatccccagt cttcctgcgg taaacgctcg
    17701 ccgtttttta accgttcttc ctggggatcg aggccatatt taacatagct accgcgcgaa
    17761 ccatgaacga tgtatcgcgc ggattccgcc gcggccagca tcgtaccgtg caaaatcacg
    17821 cggcgctggg ggtaggataa aatcgcgtgg aaataatctg tagattgcgc gcccggacgc
    17881 agttgcgcta aatccaccgt catgctgacc ggcaggccaa aaagttgaat ggcctgatcc
    17941 aacaagtgcg gcgccagatc gtaccagata ccacttcccg gcccgccttg ctcgcgccag
    18001 cggtcgcgca cctggggacg gaagcgatca aagtgggatt caaacaagga cacctcgccg
    18061 agcacgccat ccgccagcaa ggccttcagc gtcaaaaaat cgctgtccca gcgtcggttg
    18121 tggaagacgg aaagtacccg accagtgctc cgcgcaagcg catccaattc tcgcgcctgt
    18181 gacagtgtca cggtaaaggg tttatcaacc accacatgct taccggcttc cagcgcagct
    18241 ttcgccagcg ggaaatgggt atcgttgggc gtcgggatca cgatcaggtc gatatgcgga
    18301 tcgttaaata aatgtcgggg ctcagagacc acggagaccg ccggccagtc tgctttcact
    18361 tttgtttcat cgctgctgga taccgccgca agctctaacc ctggcgttcc cataattaag
    18421 ggcgcatgaa aggttttact ggcgtagcca taaccgatta acccaacgcg gattttgtca
    18481 ttcatctcac tgcctccggt tttagatatc gctattccac accatcgtgc gactagccgc
    18541 aatagcgtcc tgaccatcaa cgtagcatca aatgattaac ttgttacaga acagaggctg
    18601 aaatcgttcc cctccctctt gccgaccgtt cgccaggaaa gtaacattta ctctctgtgt
    18661 ttatggataa atcaaagcaa atgtcgtcaa taatgaatcg tcttattgaa ttaactgggt
    18721 ggatagttct cattatctca gtcattcttt taggtattgc caaccatatt gacaattacc
    18781 aaccacctga gcccacggct tccgttcaga agaagtaagc gtcagataat gtaaaggcat
    18841 tttcgcgcgg tacggtaagc agcgccccgg ggcgtgcaaa gaaaagtcaa aaaccggcaa
    18901 aaaaaacgaa atatgttcta tctggtctga cgtttattgc ctgttgtagt aaagcgcgtt
    18961 aacctttcgc cccaggcgcc atgtggcgcc tgactcttta ccggtaagaa tattcccttt
    19021 ttacctgcac ccctgacctc tcactggtgc aattttgttt atttttttat cagtgactac
    19081 tccgttggca ttatatttaa tatggatcaa ctttatatga ctgttcagga ttatctatta
    19141 aaattccgca aaattagttc gctcgaaagt ctggaaaaac tgttcgacca ccttaactat
    19201 acccttactg atgacatgga catcgttaat atgtatcgcg ctgcagatca ccgccgtgcc
    19261 gagctggttt ccggaggacg cctgtttgat gtaggtcagg ttccgcaatc cgtctggcgc
    19321 tatgtgcaat aaagaaagta gcgtttaaca tcaaaaacct tataatattt gccccaaaat
    19381 gagcggcatg accgttaacg cgcgtaaccc cggagaagat atgactacaa caccgccaca
    19441 acgaattgga ggctggcttc ttggcccgtt agcctggctg ttagtcgcgt tgttgagcgc
    19501 ctcgctggcg ttattactct acgttatggc gcttgccaca ccgcaaacgt tcaaaacgct
    19561 tagcggacag gaaaccggta atttactgct atggggcatt tcatttatta ccgctatcgc
    19621 catgtggtac tataccttgt ggttgacgat cgcattcttc aagcgcagac gctgcgtgcc
    19681 aaagcattac attatctggc tgctggtgtc ggtgttactg gcggttaaag catttgcctt
    19741 ttcgcccgtc tcagatgcct ttgccgtgcg tcagttactc ttcccactgt tggcgacggc
    19801 gctcattgtg ccttatctca aacgttcagc gcgcgttaaa acaacgtttg ttaatccgta
    19861 ataaccctac agttaacctg ttgtcgcctg tggtagtttg acagataata ggcggctttt
    19921 ttatttcagg ccgaaacatg actgattacc tgctgctctt tgtcggaact gtactggtca
    19981 ataactttgt actggtcaaa ttcctgggcc tttgtccctt tatgggcgta tccaaaaaac
    20041 tggaaaccgc catggggatg ggcctcgcga cgacctttgt catgacgctg gcgtcgatat
    20101 gcgcctggct tatcgacacc tggatactta ttccgctgga tctgatttat ctgcggacgc
    20161 tggcctttat cctcgtcatt gctgtggtcg tgcaatttac cgaaatggtt gtgcggaaaa
    20221 ccagcccggc gttataccgc ttgttaggca tcttcttacc actgattacc actaactgtg
    20281 cggttctggg cgtagcgtta ctgaatatta atctcggtca tcactttctt cagtcggcgc
    20341 tgtacggatt ttccgccgcc gtcggttttt cattagtgat ggttctgttt gccgctatcc
    20401 gcgaacgcct tgccgtggcg gatgtgcccg ccccttttcg tggtaacgcg atagcattga
    20461 ttaccgcagg attaatgtct ttggccttta tgggctttag tggtttggtg aagttgtaat
    20521 gaatactatc tggattgccg ttggcgccct gacccttctg ggtctggtgt tcggcgccat
    20581 tctgggttat gcctcccgcc gattcgcggt tgaagatgat ccggttgttg aaaaaatcga
    20641 tgcgattttg ccgcagagtc agtgtggtca gtgcggctat cccggctgtc gcccctacgc
    20701 cgaagccgtg ggtctccagg gcgagaaaat caatcgttgc gcgcccggcg gcgaagccgt
    20761 catgctgaaa atggcagagt tgctaaacgt agagccgcaa ccatgcgatg gtgaagaaca
    20821 gcaggccgcg ccagtacgta tgctggcagt tattgatgaa aataactgca ttggctgcac
    20881 aaaatgcatt caggcctgcc cggttgacgc catcgttggc gcaacgcgcg ccatgcacac
    20941 ggtcatgagc gatctctgta ctggctgtaa tctgtgcgtc gatccgtgtc cgacgcactg
    21001 catcgaatta cgtccggtga atgagacgcc cgacagttgg aaatgggatt tgaacaccat
    21061 tcccgttcgc atcattcccg tggaacaaca tgcttaaact attttccgct ttcagaaaag
    21121 ataaaatctg ggatttcgac ggtggtattc atccgcccga aatgaagtcc cagtcaaacg
    21181 gcacgccgct gcgccaggtg cctttggcgc cgcgctttgt tatcccttta aaacagcaca
    21241 ttggcgctga gggcgagctg tgcgttagcg tcggcgatcg cgtgctacgc ggccaggcgc
    21301 ttacccgtgg acgtgggaga atgctgccgg tacacgcgcc cacctccggg acggttatcg
    21361 ctattgcgcc ccactcgacg gcgcatcctt cggcgctggc ggagttaagc gtcatcattg
    21421 atgccgacgg cgaggaccgc tggattgaac gcgagggctg gtctgattac cgcgcccaca
    21481 gccgtgaagc gctcattgaa cgcattcatc agtatggcgt tgccgggctt ggcggcgcag
    21541 ggtttcccac cggcgttaaa ttgcagggcg gcgacgataa aatcaccacg cttattatca
    21601 atgccgcaga gtgcgaacct tacattacgg cggacgatcg tctgatgcag gactgcgccg
    21661 cgcagattgt ggaaggtatt cgcatcctgg cgcatattct gcaaccgcgt gaggtattaa
    21721 tcggcattga agataacaaa ccgcaggcta tttccatgct gcgcgccgta ctggctgacg
    21781 ctcatgatat ttcattacgt gttatcccga ccaaataccc ttccggcggc gcaaaacagc
    21841 tcacccaaat actgacggga aaacaggttc cccacggcgg gcgctcctct gatattggcg
    21901 tgctgatgca aaacgtcggt acggcatatg ccgtgaaacg cgccgtggtt gacggcgaac
    21961 cgatcacaga acgcgtcgtc accttaacgg gtgaagcgat aagccgtccg ggtaacgtct
    22021 gggcgcggct cggcactccc gttcgtcatt tgcttaacga tgccgggttc tgcccctctg
    22081 ctgaccagat ggtcatcatg ggcggcccgt tgatgggatt cacccttccc tggcttgacg
    22141 taccggtcgt aaaaatcacc aactgcctgc tggcgccatc cgtgactgaa atgggggcgc
    22201 ctcaggaaga gaaaagctgt attcgttgca gcgcttgcgc tgacgcctgc cctgccgacc
    22261 ttttaccgca gcagctttat tggttcagca aagggcagca gcatgacaag gctaccgctc
    22321 accatattgc tgattgtata gaatgcggcg cctgcgcctg ggtctgcccg agtaatattc
    22381 cgctcgtcca atatttccgt caggaaaaag cggagattaa tgcgatcagg cttgaagaaa
    22441 aacgcgccgc cgaagccaaa gcgcgttttg aggctcgtca ggcaagactg gagcgcgaaa
    22501 aagccgcccg ccttgcacgt cacaagagcg cagcggtaca accagcggca aaagatcagg
    22561 atgccattgc cgctgcgctg gcgcgggtaa aagagaaaca ggcgcaggcc acgcaaccgg
    22621 tggttattca ggcgggtagt ctgccagaca atagcgccgt catcgcggcc cgtgaagcgc
    22681 gtaaagcgca agcgcgcgct aaacaagccg ctc
//
LOCUS       DAGWFR010000057        22635 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.058, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000057 DAGWFR010000000
VERSION     DAGWFR010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 22635)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22635)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22635
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.058"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..975)
                     /locus_tag="MOX77_002231"
     CDS             complement(<1..975)
                     /locus_tag="MOX77_002231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3357751.1"
                     /translation="MTVLSSRNALKRRTWALFMFFFLPGLLMASWATRTPAIRDILSV
                     STAEMGTVLFGLSIGSMSGILCSAWLVKRFGTRKVIHTTMTCAVTGMVILSVALWCAS
                     PLIFALGLAVFGASFGAAEVAINVEGAAVERELNKTVLPMMHGFYSFGTLAGAGVGMA
                     LTALSVPANIHIILAAAVAIAPIFIAIRAIPDGTGKNASEGSHLQEKGLPFYRDIQLL
                     LIGVVVLAMAFAEGSANDWLPLLMVDGHGFSPTSGSLIYAGFTLGMTVGRFTGGWFID
                     RYSRVTVVRASALMGALGIGLIIFVDSDWVAGVSVILWGLGASLGFPLT"
     gene            1143..1763
                     /locus_tag="MOX77_002232"
     CDS             1143..1763
                     /locus_tag="MOX77_002232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HCA3357752.1"
                     /translation="MKENAVRRANDPKRREKIIQATLEAVKTYGVHAVTHRKIAAIAQ
                     VPLGSMTYYFAGMDALLSEAFTLFTENMSRQYQDFFAQVTDVEGACQAITEMIYGSQV
                     TTPDNMALMYQLYAYASDKPALKIVMQNWMQRSQNTLAQWFDAQTARALDAFIEGMTL
                     HFVTDRTPLAREAILQMVKRIAGESMSCHSASGNKKPTNLEPKWRG"
     gene            complement(1880..3565)
                     /locus_tag="MOX77_002233"
     CDS             complement(1880..3565)
                     /locus_tag="MOX77_002233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001024888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate:alanine antiporter"
                     /protein_id="HCA3357753.1"
                     /translation="MNINVADLLNGNYILLLFVVLALGLCLGKLRLGSVQLGNSIGVL
                     VVSLLLGQQHFSINTDALNLGFMLFIFCVGVEAGPNFFSIFFRDGKNYLMLALVMVGS
                     ALLIALGLGKLFGWDIGLTAGMLAGSMTSTPVLVGAGDTLRHSGIASTQLSSALDNLS
                     LGYALTYLIGLVSLIVGARYLPKLQHQDLQTSAQQIARERGLDTDANRKVYLPVIRAY
                     RVGPELVAWTDGKNLRELGIYRQTGCYIERIRRNGILANPDGDAVLQMGDEIALVGYP
                     DAHARLDPSFRNGKEVFDRDLLDMRIVTEEIVVKNHNAVGRRLAQLKLTDHGCFLNRV
                     IRSQIEMPIDDNVVLNKGDVLQVSGDARRVKTIADRIGFISIHSQVTDLLAFCAFFII
                     GLMIGMITFQFRNFSFGIGNAAGLLFAGIMLGFLRANHPTFGYIPQGALNMVKEFGLM
                     VFMAGVGLSAGSGISNGLGAVGGQMLIAGLVVSLIPVVICFLFGAYVLRMNRALLFGA
                     MMGARTCAPAMEIISDTARSNIPALGYAGTYAIANVLLTLAGTLIVIIWPGLG"
     gene            3836..4213
                     /locus_tag="MOX77_002234"
     CDS             3836..4213
                     /locus_tag="MOX77_002234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inner membrane protein YbjM"
                     /protein_id="HCA3357754.1"
                     /translation="MKHKHGWASVVCCFVLFIVVCLSLTMHVQGAFRAAGHPEIGLLF
                     FTLLGAVASFCSHRREVIRPLIGAMLAAPFCLVLMRVVFMPTRSFWQELAWLFSAVFW
                     CALGALCYLFISSLFSHRRKKRR"
     gene            complement(4245..4508)
                     /locus_tag="MOX77_002235"
     CDS             complement(4245..4508)
                     /locus_tag="MOX77_002235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GrxA family glutaredoxin"
                     /protein_id="HCA3357755.1"
                     /translation="MFTVIFGRPGCPYCVRAKELAEKLSKERDDFNYRYIDIHAEGIT
                     KADLEKTVGKPVETVPQIFVDQKHIGGCTDFEAWAKENLNLFA"
     gene            4678..4968
                     /locus_tag="MOX77_002236"
     CDS             4678..4968
                     /locus_tag="MOX77_002236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjC family protein"
                     /protein_id="HCA3357756.1"
                     /translation="MRTIGVLPKSVLILECLGMILLALALLSLNHYLTLPAPFNTSLA
                     GVLMVFLGVVLILPAAVAMMWRIAQLLAPQLMKRPPDISSRSDREKHNESDH"
     gene            4952..5674
                     /gene="nfsA"
                     /locus_tag="MOX77_002237"
     CDS             4952..5674
                     /gene="nfsA"
                     /locus_tag="MOX77_002237"
                     /EC_number="1.5.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase NfsA"
                     /protein_id="HCA3357757.1"
                     /translation="MSPTIELLCGHRSIRHFTDEPVTDAQREAIIAAARSTSSSSFLQ
                     CSSIIRITDRALREALVPLTGGQKHVAQAAEFWVFCADFNRHLQICPDAQLGLAEQLL
                     LGVVDTAMMGQNALTAAESLGLGGVYISGIRNNIESVTELLKLPKHVLPLFGLCLGWP
                     ADNPDLKPRLPAELVVHENQYQPLDEKLLARYDEQLAEYYLTRGSNTRRDTWSDHIRR
                     TLIKENRPFILEYLHKQGWATR"
     gene            5732..6634
                     /gene="rimK"
                     /locus_tag="MOX77_002238"
     CDS             5732..6634
                     /gene="rimK"
                     /locus_tag="MOX77_002238"
                     /EC_number="6.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6--L-glutamate ligase"
                     /protein_id="HCA3357758.1"
                     /translation="MKIAILSRDGTLYSCKRLREAAMRRGHLVEILDPLSCYMNINPA
                     ASSIHYKGRRLPHFDAVIPRIGSAITFYGTAALRQFELLGSYPLNESVAITRARDKLR
                     SLQLLARQGIDLPITGIAHSPDDTSDLIKMVGGAPLVVKLVEGTQGIGVVLAETRQAA
                     ESVIDAFRGLNAHILVQEYIAEAKGCDIRCLVVGNEVVAAIERCAKAGDFRSNLHRGG
                     VASIATITPRERDIAIKAAQTLGLDVAGVDILRAARGPLVMEVNASPGLEGIEKTTGV
                     DIAGRMIQWIERHATPEFCLKIGG"
     gene            6731..7207
                     /locus_tag="MOX77_002239"
     CDS             6731..7207
                     /locus_tag="MOX77_002239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjN domain-containing protein"
                     /protein_id="HCA3357759.1"
                     /translation="MISLVVPTLDTLRQWLDDLGMNFFECDTCQALHLPHMQNFDGVY
                     DAKINLVDNTVLFSAMAEVRPSALLPLAADLSAINASSLTVKAFLDMQDDNLPKLVVC
                     QSLSVMQGVTYEQFEWFVRQSEEQISMVILEAGAHQLLFNAEEDAQKTSAVDHFLH"
     gene            7556..8668
                     /gene="potF"
                     /locus_tag="MOX77_002240"
     CDS             7556..8668
                     /gene="potF"
                     /locus_tag="MOX77_002240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter
                     substrate-binding protein PotF"
                     /protein_id="HCA3357760.1"
                     /translation="MTALKKKWLSGLVAGALMVVSVGTLAAEQKTLHIYNWSDYIAPD
                     TVANFEKETGINVIYDVFDSNEVLEGKLMAGSTGFDLVVPSASFLERQLTAGVFQPLD
                     KSKLPGWKNLDPELLKLVAKHDPDNKYAMPYMWATTGIGYNVDKVKAVLGDDAPVNSW
                     DLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLR
                     PNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGVMAF
                     FDVFAMPADAKNKDEAYQFLNYLLRLDVIAHISDHVFYANANKEATALVSQQVRDNPG
                     IYPPADVRAKLFTLKVQEPKIDRVRTRAWTKVKSGK"
     gene            8756..9889
                     /gene="potG"
                     /locus_tag="MOX77_002241"
     CDS             8756..9889
                     /gene="potG"
                     /locus_tag="MOX77_002241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000996010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine ABC transporter ATP-binding subunit
                     PotG"
                     /protein_id="HCA3357761.1"
                     /translation="MNDAPHRPQVKTRKALTPLLEIRNLTKSFDGQHAVDDVSLTIYK
                     GEIFALLGASGCGKSTLLRMLAGFEPPSSGQIMLDGVDLAHVPPYQRPINMMFQSYAL
                     FPHMTVEQNIAFGLKQDKLPKAEITSRVNEMLGLVHMQEFAKRKPHQLSGGQRQRVAL
                     ARSLAKRLKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAG
                     RIAIMNRGKFVQIGEPEEIYEHPTTRYSAEFIGSVNVFEGLLKAREEDGLVIDAPGLV
                     HPLKVDADASVVDNVPVYVALRPEKIMLCESPPADGYNFAVGEVAHIAYLGDLSIYHV
                     RLKSGQMISAQLQNAHRYRKGLPTWGDEVRLCWEADSCVVLTV"
     gene            9899..10852
                     /gene="potH"
                     /locus_tag="MOX77_002242"
     CDS             9899..10852
                     /gene="potH"
                     /locus_tag="MOX77_002242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine ABC transporter permease PotH"
                     /protein_id="HCA3357762.1"
                     /translation="MSTLEPPARISKPGGAALWLARMQMKHGRKLVIALPYIWLILLF
                     LLPFLIVFKISLAEMARAIPPYTDLLEWADGQLSITLNLGNFLQLTDDPLYFEACLQS
                     LQIAGISTICCLLLGYPLAWAVAHSKPSTRNILLLLVILPSWTSFLIRVYAWMGILKN
                     NGVLNNVLLWLGVIDQPLTILHTNLAVYIGIVYAYLLFMVLPIYTALTRIDYSLVEAS
                     LDLGARPMKTFFSIIVPLTKGGIIAGSMLVFIPAVGEFVIPELLGGPDSIMIGRVLWQ
                     EFFNNRDWPVASAVAIIMLLLLIVPIMWFHKHQQKSVGEHG"
     gene            10849..11694
                     /gene="potI"
                     /locus_tag="MOX77_002243"
     CDS             10849..11694
                     /gene="potI"
                     /locus_tag="MOX77_002243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine ABC transporter permease PotI"
                     /protein_id="HCA3357763.1"
                     /translation="MNNLPVVRSPWRILILVLGFTFLYAPMLMLVIYSFNSSKLVTVW
                     AGWSTRWYGELFRDTAMMSAVGLSLTIAACAATMAVVLGTIAAVVMVRFGRFRGANGF
                     AFMITAPLVMPDVITGLSLLLLFVALGHTIGWPSDRGMLTIWLAHVTFCTAYVAVVIA
                     SRLRELDRSIEEAAMDLGAAPLKVFFVITLPMIMPAVISGWLLAFTLSLDDLVIASFV
                     SGPGATTLPMLVFSSVRMGVNPEINALATLILGVVGIIGFIAWYLMARAEKQRIRDIQ
                     RARRG"
     gene            11768..12241
                     /locus_tag="MOX77_002244"
     CDS             11768..12241
                     /locus_tag="MOX77_002244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjO family protein"
                     /protein_id="HCA3357764.1"
                     /translation="MGFIKQSTSSHARLNVPTLVQVAAMAIILIRGLDVLMIMNTLGI
                     RGMGEFIHRSVQTWSLTLVFLASLVLVFIEIYCAFSLVKGRSWARWVYLAAQIIVSGY
                     LWAASLGYGYPELFSIAGESKRDILHSLVMQKLPDLLILFLLFIPAPSRRFFRLQ"
     gene            12284..13411
                     /gene="rlmC"
                     /locus_tag="MOX77_002245"
     CDS             12284..13411
                     /gene="rlmC"
                     /locus_tag="MOX77_002245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001149796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(747)-C(5))-methyltransferase
                     RlmC"
                     /protein_id="HCA3357765.1"
                     /translation="MQCALYDAGRCRSCQWITQSVNEQLSAKTADLHRLLAGLPVEQW
                     CAPISGPEQHFRNKAKMVVSGSVEKPLFGMLHRDGTPVDLCACPLYPASFAPVFSALK
                     PFIARAGLTPYNVARKRGELKYLLLTESQFDGGMMLRFVLRSETKLTQLRAALPWLRA
                     QLPQLRVITANIQPVHMAIMEGETEIYLTDQQALAERFNDVPLWIRPQSFFQTNPTVA
                     SRLYATARDWVGQLPVRHMWDLFCGVGGFGLHCATPQMQLTGIEIAPEAIACAKQSAA
                     ELGLTRLHFQALDSTQFATAQGETPDLVLVNPPRRGIGKPLCDYLAQMAPRFIIYSSC
                     NAQTMAQDIRHLPNYRIQRVQLFDMFPHTAHYEVLTLLCRL"
     gene            13706..15049
                     /locus_tag="MOX77_002246"
     CDS             13706..15049
                     /locus_tag="MOX77_002246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HCA3357766.1"
                     /translation="MEGVQTMFAKFIDVIQTFLTEPAILIGILVGVGYALDKKTPIKI
                     ITGMISAMVGLMMVLFGGFQFSATFKPVAEAVSKAYGVHGYLMDSYAMKAATQIALGD
                     NFGYVGYVFVLAFFTNLILVLFGRYTGAKGIFLTGNTGVSHSQAVLWLIVFWLGFGWV
                     QSIVIAGVLTGVFWAFSTTLIVKPIAKVTNNAGFTIAHNQMLGLWFFSKFAHKFGDPE
                     KHDAENLKLPGWLAIFNHNVTAIAIVMTLFVGGFLLATGIDNVQLMAKGKPWYIYIIN
                     LGLQFSMYMVILLQGVRMMVGEINGSFKGWQDRFIPNAIPAVDVAALLPFSPNAATLG
                     FVFCTFGTIFSMGILLLIHSPIMVLPGFVPLFFSGGPIGVLANRMGGYRSVIICTFLL
                     GIIQTFGTVWAIPLTGLAKEGVGWTGIFDWATLWPAICELLKFIASTFHLGPYSI"
     gene            15081..15401
                     /locus_tag="MOX77_002247"
     CDS             15081..15401
                     /locus_tag="MOX77_002247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HCA3357767.1"
                     /translation="MKDSVNILFVCGYGVGSSVMLQTVVKKALAKYDFSFDMEHTAAG
                     EVGGFTDWADIYAISKKLLDVVSLDPKHGQYLIPIENIMDSESIGKQIYDVVEKNFPH
                     LLNK"
     gene            15411..16898
                     /locus_tag="MOX77_002248"
     CDS             15411..16898
                     /locus_tag="MOX77_002248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase"
                     /protein_id="HCA3357768.1"
                     /translation="MKAIILLFDSLNKNYLPPYGDLLTKAPNFQRLAAHAATFDNSYV
                     GSMPCMPARRELHTGRYNFLHREWGPLEPFDDSMPELLKKAGIYTHLISDHLHYWEDG
                     GGNYHNRYSSWDVVRGQEGDHWKASVGEPPIPEVLRVPQKQTGGGVSGLWRHDWANRE
                     YIQQEADFPQTKVFDAGCDFIHKNHAEDNWLLQVETFDPHEPFYTTEEYLSLYDDEWQ
                     GSHYDWPRGKVSESEEAIAHIRCRYRALVSMCDRNLGRILDLMDEHDLWRDTMLIVGT
                     DHGFLLGEHGWWAKNQMPYYNEVANNPLFIWDPRSAVCGARRQSLVQMIDWAPTLLDY
                     FQQPIPADMQGQPLAKVIASDEPVREGALFGVFSGHVNVTDGRYVYMRAAQPGREHDI
                     ANYTLMPIKMNARYDVDELGKLSLAPPFKFTKGLQVLRIPAREKYKGVNSFGHLLFDL
                     RDDPQQQHPIHDEAIEARMINLLIRLMKENDAPAEQYRRLGLDVV"
     gene            complement(17117..17848)
                     /gene="artJ"
                     /locus_tag="MOX77_002249"
     CDS             complement(17117..17848)
                     /gene="artJ"
                     /locus_tag="MOX77_002249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein ArtJ"
                     /protein_id="HCA3357769.1"
                     /translation="MKKLVLAALLASFATGSIAAEKINFGVSATYPPFESLDASNKIV
                     GFDIDLATALCKQMQAECTFTNHAFDSLIPALKFRKYDAVISGMDITPERSKQVAFSN
                     PYYANSALVIAKKDTYKTFTDLKGKRIGMENGTTHQKYLQDKHPEVKTVAYDSYQNAI
                     IDLKNGRIDGVFGDTAVVNEWLKTNPQLGPATEKVTDPQYFGTGLGIAVRPDNKALLE
                     KLNNALAAIKADGTYQKISDQWFPQ"
     gene            complement(18085..18753)
                     /gene="artM"
                     /locus_tag="MOX77_002250"
     CDS             complement(18085..18753)
                     /gene="artM"
                     /locus_tag="MOX77_002250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter permease ArtM"
                     /protein_id="HCA3357770.1"
                     /translation="MLEYLPELLKGLHTSLTLTVASIAVALVLALVFTIILTLKTPFV
                     VWLVRGYITLFTGTPLLVQIFLIYYGPGQFPTLQEYPLLWHLLSEPWLCALIALSLNS
                     AAYTTQLFYGAIRAIPEGQWQSCGALGMSKKDTLAILLPYAFKRALSSYSNEVVLVFK
                     STSLAYTITLMEVMGYSQLLYGRTYDVVVFGAAGVIYLVVNGLLTLMMRLIERKALAF
                     ERRN"
     gene            complement(18753..19469)
                     /gene="artQ"
                     /locus_tag="MOX77_002251"
     CDS             complement(18753..19469)
                     /gene="artQ"
                     /locus_tag="MOX77_002251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter permease ArtQ"
                     /protein_id="HCA3357771.1"
                     /translation="MNEFFPLASAAGMTVGLAVCALIIGLALAMFFAVWESVKWRPIA
                     WIGSALVTILRGLPEILVVLFIYFGSSQLLLTLSDGFTLHLGFTQIPVQMEIENFDVS
                     PFLCGVIALSLLYAAYASQTLRGALKAVPSGQWESGQALGLSKTAIFFRLVMPQMWRH
                     ALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFNWYIIAAAIYLVITLI
                     SQYILKRIDLRATRFERRPD"
     gene            complement(19476..20207)
                     /gene="artJ"
                     /locus_tag="MOX77_002252"
     CDS             complement(19476..20207)
                     /gene="artJ"
                     /locus_tag="MOX77_002252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter substrate-binding
                     protein"
                     /protein_id="HCA3357772.1"
                     /translation="MKKVLIAALIAGFSLSATAAQTIRFATEASYPPFESMDANNKIV
                     GFDVDLANALCKEIDASCTFTNQAFDSLIPSLKFRRFDAVMAGMDITPEREKQVLFTT
                     PYYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIMDKHPEITTVPYDSYQNAK
                     LDLQNGRIDAVFGDTAVVTEWLKANPKLAPVGDKVTDKDYFGTGLGIAVRQGNTELQQ
                     KFNTALEKVKKDGTYETIYNKWFQK"
     gene            complement(20225..20953)
                     /gene="artP"
                     /locus_tag="MOX77_002253"
     CDS             complement(20225..20953)
                     /gene="artP"
                     /locus_tag="MOX77_002253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001742668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter ATP-binding protein
                     ArtP"
                     /protein_id="HCA3357773.1"
                     /translation="MSIQLNGINCFYGAHQALFDITLDCPEGETLVLLGPSGAGKSSL
                     LRVLNLLEMPRSGTLTIAGNHFDFTKTPSDKAIRELRQNVGMVFQQYNLWPHLTVVQN
                     LIEAPCRVLGLTKDQALARAEKLLERLRLKPYSDRYPLHLSGGQQQRVAIARALMMEP
                     QVLLFDEPTAALDPEITAQIVSIIHELAETNITQVIVTHEVEVARKTASRVIYMENGH
                     IVEHGDAGCFAHPQTEAFKNYLSH"
     gene            complement(21182..21697)
                     /locus_tag="MOX77_002254"
     CDS             complement(21182..21697)
                     /locus_tag="MOX77_002254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HCA3357774.1"
                     /translation="MRYSKLSLLIPCALLLSACTTVTPAYKDNGPRIGACVEGGPDSV
                     AQQFYDYRIQHHSNDIAALRPYLSDNLAKLLTDASRDTEHRQLMSGDMFSSRATLPDS
                     ANVASASTIPNRDARNIPLRVALKQGDQSWQDEVLMIHEGSCWVIDDVRYLGGDVHAP
                     AGTLRQSIENR"
     gene            21825..22148
                     /locus_tag="MOX77_002255"
     CDS             21825..22148
                     /locus_tag="MOX77_002255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal-binding domain-containing protein"
                     /protein_id="HCA3357775.1"
                     /translation="MQFSTTPTLEGQSIVEYCGVVTGEAILGANIFRDFFAGIRDIVG
                     GRSGAYEKELRKAREIAFQELGEQAKALGADAVVGIDIDYETVGKDGSMLMVSVSGTA
                     VKTRR"
     gene            22145..>22635
                     /locus_tag="MOX77_002256"
     CDS             22145..>22635
                     /locus_tag="MOX77_002256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HCA3357776.1"
                     /translation="MKALLWLVGLALLLTGCASEKGIIDKEGYQLDTRHRAQAAYPRI
                     KVLVIHYTAENFDVSLATLTGRNVSSHYLIPATPPLYGGKPRIWQLVPEQDQAWHAGV
                     SFWRGATRLNDTSIGIELENRGWRMSGGVKSFAPFESAQIQALIPLAKDIIARYDIKP
                     QNVV"
BASE COUNT         5360 a         5557 c         6106 g         5612 t
ORIGIN      
        1 ggtcagcggg aagccgagcg aagcgcctaa gccccaaaga atgaccgaga cgccggcaac
       61 ccagtcgcta tcgacaaaaa taatcaggcc aatgcccaac gctcccatca acgcgctggc
      121 gcgaacaacc gtcacccggc tatagcggtc aataaaccag ccgccggtaa agcggccaac
      181 ggtcatacca agcgtgaaac cggcgtagat cagagagccg gaggttgggc taaaaccgtg
      241 tccgtctacc atcagtagcg gtagccagtc attcgcagat ccttcggcga atgccattgc
      301 cagcaccacc acgccaataa gcaaaagctg gatgtcccga taaaaaggta atcctttttc
      361 ctgaaggtga gaaccttccg atgcgttttt acccgtaccg tcagggatcg cccgaatggc
      421 gataaaaatg ggcgcgatcg ccacggcagc cgcgaggatg atatggatgt tagccgggac
      481 gcttaatgcg gttaacgcca tgccgacacc agcgcccgcc agcgtgccga aactgtagaa
      541 accatgcatc atcggcagaa cggttttatt cagctcgcgt tcgaccgccg cgccttcgac
      601 attaatcgcc acttcggcgg cgccaaaact ggcgccgaaa acggctaatc caagggcaaa
      661 aatcagcggc gaggcgcacc acagcgcgac gctaagaata accatcccgg ttactgcgca
      721 ggtcatcgtc gtgtgaataa ccttccgggt gccaaatcgt ttcaccagcc aggcggaaca
      781 aagaataccg ctcattgaac cgatagaaag cccgaataag accgtcccca tttccgcggt
      841 agagacggaa agaatatccc gaatagcagg cgttcgggtt gcccaggagg ccatcagcag
      901 tccgggtaaa aagaagaaca taaacagcgc ccaggtacgg cgttttaagg cgttacgtga
      961 ggagaggacg gtcatagcgt caggccagaa aatagaagcg agaggtaaac attagcaagc
     1021 ttgtgtacat ttgtacatat cgtcgtcata cttcgttgtg cagacagttt ttgctgtctg
     1081 ttttttcagc gtaagcggca ggctactatc gcctgcatcc tgaatgagat gtggaactca
     1141 tcatgaaaga aaatgccgta agacgcgcca atgatcctaa gcgacgggaa aaaataattc
     1201 aggccacact ggaagcggta aagacctatg gcgttcatgc cgtgacgcac cggaaaatcg
     1261 ccgctatcgc tcaggtgccg cttggctcga tgacctacta ttttgccggt atggatgcgt
     1321 tattgagtga agcttttaca cttttcaccg agaacatgtc gcgtcaatac caggattttt
     1381 ttgcgcaggt gacggatgtg gagggggcgt gccaggcgat aacggaaatg atttacggct
     1441 cgcaggttac gacgccggat aatatggcgt taatgtatca gttatatgcc tatgccagcg
     1501 ataagccagc gttaaaaata gtcatgcaaa actggatgca gcgtagccag aatacgctgg
     1561 cgcagtggtt tgacgcacag accgcccgcg cgctggatgc gtttatcgag gggatgacgc
     1621 tgcattttgt gacggatcga acgccgttgg cgcgtgaagc gattttacag atggtaaagc
     1681 gaatagccgg agagtcaatg tcgtgtcact ctgcgtcggg caacaaaaaa cccaccaacc
     1741 ttgaaccgaa atggcggggt tgatgggctc cacaaaatgg ggacatcaaa gaaaagcagt
     1801 ggcaataggt atgactgatg ctttaacgaa aagttcgacc tattggcaaa attttttcac
     1861 ttaaaggcaa acttcagttt tatcctaatc ccggccagat gatgacaata agcgtccccg
     1921 ccagcgttag cagaacgttg gcgatggcgt aagtccccgc ataacccagc gctggaatat
     1981 tgctgcgcgc tgtatcgcta atgatttcca tcgccggggc gcaggtacgc gcgcccatca
     2041 tggcgccgaa cagcagcgcc cggttcatgc gcagcacata agcgccaaac aagaagcaga
     2101 tcaccaccgg tatcaggctg acgacaagcc cggcgatcag catttgtccg ccgaccgcgc
     2161 ccagaccgtt gctgataccg ctgccggcgc ttaaaccaac gcctgccata aataccatca
     2221 agccgaattc tttcaccatg ttaagcgcgc cctgcggaat ataaccaaag gtaggatggt
     2281 tagcgcgcag gaaaccgagc atgatcccgg cgaacagcaa tccggccgcg ttgccgatgc
     2341 cgaaactaaa atttctgaac tggaaggtaa tcatcccgat cattaacccg atgataaaaa
     2401 aagcgcagaa ggcgagcagg tccgtcacct gactatggat cgaaataaaa ccaatgcgat
     2461 cggcgatggt ttttacgcgt ctggcgtcgc cgctcacctg taacacgtcg cctttattca
     2521 gcacgacgtt atcgtcgata ggcatttcga tctggctgcg gatgacgcgg ttaaggaagc
     2581 agccatgatc ggtcagcttg agctgagcga ggcggcgacc gaccgcattg tggtttttca
     2641 ccacaatttc ctccgtcacg atgcgcatat caagcagatc gcgatcaaac acttccttac
     2701 cattacggaa gctgggatcg agcctggcgt gcgcgtccgg atagccgacc agcgcaatct
     2761 catcgcccat ttgcagcacc gcatcgccat ccgggttcgc cagaataccg ttacgacgaa
     2821 tacgttcgat atagcagcct gtctggcggt aaatacccag ctcgcgcagg tttttaccgt
     2881 cagtccaggc caccagttcc gggccaaccc gataggcgcg gataaccggc aaataaacct
     2941 tgcgattagc atcggtatcc agaccgcgct cgcgagcaat ttgctgggcg ctggtttgca
     3001 aatcctgatg ctgtagttta ggcaagtaac gcgcgcccac gatcagactg accagcccaa
     3061 tcagataggt cagggcatag cccaggctca gattatcaag agcggaggag agttgggtgc
     3121 tggcgatgcc ggaatgtcgc agggtatcgc ctgcgccaac cagcacgggc gtggatgtca
     3181 ttgagccggc cagcataccg gccgtcaggc cgatatccca gccgaatagc ttaccaaggc
     3241 ctaaggcgat tagcagagcg ctaccgacca tgaccagggc aagcatcaga taatttttac
     3301 cgtcgcgaaa aaaaatcgaa aaaaagttgg ggccagcctc gacgccgaca caaaaaataa
     3361 acagcataaa tcccagattt agcgcgtcgg tgttaatact aaagtgttgc tgccctaata
     3421 atagagagac cactaaaacg ccaatggaat taccaagttg gactgaaccc agacgtaact
     3481 tgccaagaca caggccaaga gccaggacca caaataataa caggatgtaa ttcccattta
     3541 acaaatctgc gacgtttata ttcacggaga ctaacttctt gtttacgagt aagctgttga
     3601 aagaaatggt aatttacgct actgttttta tcatgaatta agggtgcaat cgtattgcat
     3661 acagcatcca aataaaaaca acacaacaat atatcctgct agtttaatct tattgcgtac
     3721 taacggctat aagaattgtg caggtgtgtt tttggcatgg aatgccacat gactttatct
     3781 gactggatgc ctcacggcgg aaagcgtgtt cgatagagag tgtcaggagg aacggttgaa
     3841 acataaacac gggtgggcaa gcgttgtctg ctgctttgta ctctttattg tggtgtgtct
     3901 ttcattaact atgcatgtac aaggcgcttt tcgcgcggca gggcatcctg agattggact
     3961 gttatttttt acgttgcttg gtgcggtggc cagtttttgt tctcaccgac gcgaggtgat
     4021 ccgaccgctg atcggggcga tgctggcggc gccgttttgc ctggtgttaa tgcgcgtggt
     4081 atttatgcct acccgatcgt tttggcaaga actggcgtgg ttatttagcg ccgtattctg
     4141 gtgtgcgtta ggcgcgctct gctatttgtt tattagcagc ctgtttagcc accggcgaaa
     4201 aaaacgccga tagcgccctc cggcagaggg cgtcgccaga gcaatcaggc gaaaagattc
     4261 agattttctt ttgcccatgc ttcaaaatcc gtacagccgc cgatatgttt ttgatcgaca
     4321 aaaatctgcg gtacggtttc tacaggttta cctacggttt tttccaaatc cgctttagta
     4381 atgccttcgg catggatatc aatatagcgg tagttgaaat cgtcgcgttc tttgctcagt
     4441 ttttccgcca actcttttgc acgcacgcaa taagggcacc ctgggcggcc aaaaataaca
     4501 gtaaacatat ctctcctcga acataaagcc agacggcgaa caggtgttat catgccgcga
     4561 tttacggcag atgaaaagca ggttacgcct gttcctttga taactcaggg ctatatctgt
     4621 taagcacgcc ggaccagaac gttctacact gtgcgtcagt taaccgggag gcttgatatg
     4681 cgcacgatcg gcgtgttacc caaaagcgta ctgatactgg aatgcctcgg tatgattttg
     4741 ctggcgcttg ctctgctatc gcttaatcat taccttacgc tgcccgcgcc gttcaatacg
     4801 tcgctggctg gcgtattgat ggttttcctg ggcgtcgtgt tgatcctccc cgccgcggtg
     4861 gcgatgatgt ggcgtattgc gcagttactg gcgccgcagt tgatgaaacg tccacccgac
     4921 atttcttccc gttcagatag agaaaagcat aatgagtccg accattgaac ttctttgtgg
     4981 ccatcgttct attcgccatt tcaccgatga acccgtgact gacgcgcagc gagaggccat
     5041 tattgccgcc gcgcgcagca cgtccagttc cagtttttta cagtgcagct ctataatccg
     5101 tattaccgat cgggcgctgc gcgaggcgtt agtgcccctg acgggcgggc aaaagcatgt
     5161 ggcgcaggcc gctgagttct gggtattttg tgccgatttt aatcgtcatt tgcagatctg
     5221 tcctgacgcg cagttggggc ttgccgaaca actgctgctc ggtgtcgtcg atacggcgat
     5281 gatggggcaa aacgcgctga cggcggcgga atcactgggg ttaggcggcg tgtatatcag
     5341 cggcatccgt aataatattg aatctgttac cgaactatta aaattgccga agcatgtatt
     5401 gccgctcttt ggcctgtgtt tgggatggcc tgcggataat ccggatctga aaccgcgcct
     5461 gcctgccgag cttgtggttc atgagaacca gtatcaaccg cttgatgaaa agctgctggc
     5521 gcgctatgac gagcagttgg ctgagtatta tctgacccgc ggcagtaata cgcgacgcga
     5581 tacctggagc gatcatatcc gtcgcaccct gattaaagaa aatcgcccat ttatccttga
     5641 atatttgcat aaacagggct gggcgacgcg ctaaaacctg cgggccagtg tatgatacgc
     5701 gggcttttca gggttttcag cgaggtgcag ggtgaaaatt gccatattgt ctagggatgg
     5761 aacgctctat tcttgcaaac gtctgcgcga agcggcgatg cggcgcggcc atctggtcga
     5821 gatactcgat cctctttcct gctatatgaa tattaatccg gcagcgtcgt cgatccatta
     5881 caaggggcgt cgtctgcccc attttgacgc cgttattccc cgtattggtt cggccattac
     5941 cttttatggt accgctgcgc tacgtcagtt tgagctactg ggtagctatc cgctgaatga
     6001 atccgtcgct attacccgcg cgcgcgataa gctgcgatcg ctacaacttc tggcgcgcca
     6061 ggggatcgat ctccccatta ccgggatcgc ccattcgccg gatgatacca gcgatcttat
     6121 taagatggtt ggcggggcgc cgctggtcgt gaagctggta gaaggcacgc aagggatcgg
     6181 cgtggtattg gcggagacgc gtcaggctgc tgaaagcgtt attgatgcgt ttcgggggct
     6241 gaatgcccat atcctggttc aggaatacat tgccgaagct aaaggatgcg atattcgttg
     6301 tctggtcgtc ggcaatgagg ttgtggcggc gattgagcgg tgcgcgaaag ccggtgattt
     6361 tcgctccaat cttcatcgtg gcggggtggc cagcatcgcg acgatcacgc cccgtgaacg
     6421 ggatatcgcc atcaaagccg cacagacgct ggggctggat gtggcgggtg tcgatatttt
     6481 acgcgccgcg cgcgggccgc tggtgatgga ggtgaatgcc tcgccgggac tggaaggtat
     6541 cgaaaagact acgggcgtgg atatcgcggg gcgaatgatt cagtggatag aacgtcacgc
     6601 tacgcctgaa ttttgcctta aaatcggcgg ctaatcgcaa tcgtggattc cgccgtagta
     6661 cgaagcacgc tttttgcgta agctgtgccg gtaatttttt catcgtcatc gtaagaggta
     6721 gcacattatt atgatatcac tggtcgttcc cactctggat acgttgcgtc aatggctcga
     6781 cgacctgggc atgaatttct tcgaatgtga tacctgccag gcgctgcatt tgccgcatat
     6841 gcagaatttt gacggcgtct acgatgctaa aatcaatttg gtggacaaca ccgttctttt
     6901 ttccgcgatg gcggaggtca ggccttccgc gttgctgccg ctggcggccg atctctctgc
     6961 tatcaacgcc agttcgttga cggtaaaagc ctttctcgat atgcaggatg ataatctgcc
     7021 aaaactggtt gtgtgccagt ctttatccgt tatgcaaggc gtcacctacg agcagttcga
     7081 atggtttgtt cgccaaagtg aagagcagat ttctatggtg atccttgagg ccggggcgca
     7141 tcagcttctg tttaacgcgg aagaagacgc gcaaaaaacc agcgcggttg accattttct
     7201 tcactgatcc ctcccgataa tcaggcagtc gctgccagcg cggctgctgt ttacgttttt
     7261 ttatgctgct gttaaccttt atttaaagaa ttattcacct cctttctggc catttcgctt
     7321 tatcacatag acaaaacctg cataaaaaat tgataaaagg cgttttttaa tctgggctat
     7381 agcctcaaac cttagctaaa gttattcttg cgaagcttct atagcgagct tgatggcagg
     7441 gagggcgacc tctcttcttc atttgtatca aatgaaaagg tatgcacatt tcaggcatgt
     7501 tttaaaccac gcctaatggg ttcatttgtt aacggatttt agaaggaaag cgatgatgac
     7561 cgccttaaag aaaaaatggc tatcgggtct ggttgcgggt gctctgatgg tcgtctctgt
     7621 cggcacgctc gctgccgaac aaaaaacgct gcacatttat aactggtcag attatatcgc
     7681 gccggacacg gtggcgaact ttgaaaaaga gaccgggatt aacgttatct atgatgtctt
     7741 tgactctaac gaagtgctgg aaggcaagtt aatggcaggc agcaccgggt tcgatctggt
     7801 ggtgccatcg gccagttttc ttgagcgcca gctcaccgcg ggcgtttttc agccgctgga
     7861 taaaagcaaa cttcccggct ggaaaaacct cgatcctgaa ctgctgaaac tggtagcgaa
     7921 gcacgatcct gacaacaaat acgccatgcc ctatatgtgg gccacgacgg gcattggcta
     7981 taacgttgat aaagtgaaag cggtgctggg ggatgatgcg ccagtgaata gctgggattt
     8041 agtcctcaag ccggaaaatc tggagaagct aaaaagctgc ggcgtctctt tccttgatgc
     8101 gcctgaagaa atttttgcca ccgtgctgaa ttatctgggt aaagatccga atagcagcaa
     8161 agcggatgac tacaccggcc cggcaaccga tctgttgttg aagctacggc caaacattcg
     8221 ctatttccac tcctcgcaat acattaacga tctggctaat ggcgatacct gtgtggccat
     8281 cggctgggcg ggcgatgtct ggcaggccgc taaccgggcg aaagaggcga aaaatggcgt
     8341 caatatctct ttctcgatcc ccaaagaggg ggtaatggca ttttttgatg tgtttgccat
     8401 gccggctgac gccaaaaata aagacgaggc ctaccagttc cttaattatc tgctgcgcct
     8461 tgatgtgatt gctcatattt ccgatcacgt tttctacgcc aatgcgaata aagaggcgac
     8521 ggcgctggtc agccagcagg tgcgcgataa cccaggaatt tatccgccgg cggatgtgcg
     8581 ggccaagttg tttaccctga aagtgcagga gccgaagatt gatcgcgtcc gcacccgcgc
     8641 atggacgaag gtgaaaagcg gtaagtaatt tattaacggt atggcctgat aagcgtgcgc
     8701 tatcgggcat tccaccgttt gtatcgtttg attgtgttat gccggagagc gccttgtgaa
     8761 tgatgccccc caccgcccgc aggtgaaaac ccgtaaagcg ctgacgccgc ttctggaaat
     8821 tcgcaacctg acgaagtcat tcgacgggca acatgctgtc gatgatgtca gtctgactat
     8881 ctataaaggt gagatttttg ccctgctggg cgcgtcaggt tgtggaaaat cgactctgtt
     8941 acggatgctg gcgggttttg aaccgccgag cagcgggcaa attatgctcg acggcgtcga
     9001 tctggcgcat gttccgccgt atcagcgtcc gattaatatg atgtttcagt cctatgcgtt
     9061 gtttccgcat atgacggtag agcagaacat cgcttttggt ctgaagcagg acaaactgcc
     9121 gaaggcggag attaccagcc gcgtcaatga gatgctgggt ctggtgcaca tgcaggagtt
     9181 tgcaaaacgt aagccgcatc agctttccgg cggtcagcgt cagcgcgtgg ccctggcgcg
     9241 cagcctggcg aaacgtctta agctgctctt gttggatgaa ccgatgggcg cgctggataa
     9301 aaaattacgc gaccggatgc agctggaagt ggtggatatc cttgagcgcg tcggcgtgac
     9361 ttgcgtcatg gtgacgcacg atcaggaaga agccatgacg atggcggggc gcattgccat
     9421 catgaaccgt ggaaaatttg tgcaaattgg cgaaccggag gagatttacg agcatccgac
     9481 aacccgctat agcgccgaat ttatcggatc ggtaaatgtt tttgagggct tactgaaagc
     9541 gcgtgaagag gacggtctgg tcattgacgc gcccggtttg gttcatccgt taaaagtcga
     9601 tgcagatgcc tctgtcgttg ataatgtgcc ggtatatgtg gcgctacgtc cggaaaaaat
     9661 catgctgtgt gagtcgccgc ctgccgatgg ctataatttc gccgtcggcg aagtggcgca
     9721 tattgcgtat ctcggcgatc tgtctattta tcatgtgcgg ctaaaaagcg ggcagatgat
     9781 cagcgctcaa ctgcagaatg cgcaccgtta ccggaaaggg ttaccgacct ggggcgatga
     9841 agtgcgtttg tgctgggaag cggatagctg cgtggtcctg acggtataag ggggaaacat
     9901 gagcacactt gaacctccgg cacgcatcag taaacctggc ggcgcggcgc tatggttggc
     9961 gcgaatgcaa atgaaacatg ggcgtaagct ggttattgct ttgccttata tctggctcat
    10021 tctgctgttt ttactgccgt ttcttatcgt ctttaagata agcctggcgg aaatggcgcg
    10081 ggcgatcccg ccgtataccg atctgctgga atgggctgac ggtcagttgt cgattacgct
    10141 caacctcggc aattttttgc aactgaccga cgatccgctc tatttcgaag cctgtctgca
    10201 atcgttacaa attgccggta tttccacaat ctgctgcctg ctgctgggct acccgctggc
    10261 gtgggcggtg gcgcacagca agccctccac gcgcaatatc ctgctgctgt tggtgattct
    10321 gccctcgtgg acgtcttttt taatacgcgt ctatgcctgg atgggcattt tgaaaaacaa
    10381 cggtgtgctg aacaatgtgt tgctgtggct aggggttatc gatcagccgc tgacgatcct
    10441 gcacactaac ctggccgtct atatcggcat tgtttatgcg tatctgctgt ttatggttct
    10501 gcccatttat accgcgttga cgcgcattga ttattcgctg gtggaagcgt cgctggatct
    10561 cggcgcccga ccgatgaaaa cattttttag catcattgtc ccgctcacca aaggcggaat
    10621 catcgccggc tcgatgctgg tttttatccc ggcggtgggc gagttcgtga tcccggaact
    10681 gcttggcggg ccggacagta tcatgattgg tcgcgtcctg tggcaggagt ttttcaataa
    10741 ccgcgactgg ccggtggctt ctgcggtcgc cattattatg ttgctgctgc tgatagtccc
    10801 gatcatgtgg ttccataaac atcagcaaaa aagtgtgggg gagcacggat gaataactta
    10861 ccggtcgttc gctcgccctg gcgcattctg attctggtgc tggggtttac ttttctctat
    10921 gcgccgatgt taatgttggt gatttactcg tttaacagtt cgaagctggt gacggtgtgg
    10981 gcgggatggt cgacgcgctg gtatggcgag ctctttcggg ataccgccat gatgagcgca
    11041 gtgggactaa gcctgacaat tgccgcctgc gcggcgacga tggcggtggt gctcggtact
    11101 atcgccgcgg tggtgatggt gcgatttgga cgatttcgcg gcgcaaacgg ctttgcgttt
    11161 atgatcaccg cgccgctggt gatgccggat gtgattaccg ggctgtcgct gctgctgctg
    11221 tttgtcgcgc tcggtcatac tatcggctgg ccctccgatc gcggaatgct gaccatctgg
    11281 ttggcgcacg tcactttctg taccgcctat gtggcagtgg tgatcgcttc gagattacgc
    11341 gaactggatc gttcgattga agaggcggcg atggatcttg gcgcggcgcc gttgaaggtc
    11401 ttttttgtca ttacgttacc gatgatcatg ccagcggtga tctcgggctg gctgttggcc
    11461 tttacgctct cccttgacga tctggtgatt gccagcttcg tttccggtcc cggcgccacc
    11521 acgctaccga tgctggtttt ctccagcgtg cgcatgggtg tgaacccgga aatcaacgcg
    11581 ctggcgacgt taatcctcgg cgtggtagga atcatcggat ttattgcctg gtacctgatg
    11641 gcgcgagcgg aaaaacagcg gattcgcgat atccagcgtg caagacgcgg ctgaagccac
    11701 taaaatcttc cactatggca atgcgttgcc gcgcgagtcg cggcatcatt ttcagggaag
    11761 acattcattg ggatttataa agcaatcaac ctcatcacat gcccgtttaa atgtgcctac
    11821 gctggtgcag gttgcggcta tggcgattat tttgattcgc ggtctcgatg tgctgatgat
    11881 tatgaatacc ctcggcatac gcgggatggg cgagtttatt catcgcagcg tgcagacgtg
    11941 gagcttaacc ctggtctttc tggccagctt agtgctggtc tttattgaaa tttattgtgc
    12001 gttttcgctg gtgaaaggcc gtagctgggc gcgctgggtg tacctggcgg cacaaattat
    12061 tgtgagtggg tatctgtggg cggcgtcgtt aggctacggg tatccggagt tgtttagcat
    12121 cgcgggagaa tcgaagcgtg atatcctgca ttccctggtc atgcaaaaac tccccgatct
    12181 tttaattctg tttctgctgt ttattcccgc tcccagccgt cggttcttcc ggctgcaata
    12241 atgtgtataa tcgtcacccc ggataatatg aaggtttttt ggtatgcagt gcgcactcta
    12301 tgacgcgggt cgctgccgtt cctgtcaatg gattacgcag tcggttaacg aacaactttc
    12361 cgcaaaaaca gccgatttac atcgtttgct ggccgggctg cctgttgaac agtggtgcgc
    12421 gccgattagc ggcccggaac agcatttccg caacaaagcg aaaatggtcg tgagcggtag
    12481 tgtagaaaaa ccgctcttcg ggatgctgca tcgcgacggt acgccggtcg atctttgcgc
    12541 ttgcccgctg tatcccgcct cctttgcccc cgtattcagc gcgctaaaac cttttattgc
    12601 ccgtgccgga ctcacgcctt ataacgtggc gcgaaaacgc ggcgaactga aatacctgtt
    12661 gctgacggaa agtcagttcg atggcggcat gatgctacgc ttcgtgttgc gttcagaaac
    12721 caaacttacg caactgcgcg cggcgttacc gtggctgcgc gcgcaactgc cgcagctcag
    12781 agtgatcacc gcgaatatcc agccggtaca tatggcgatt atggaagggg agacggaaat
    12841 ctatctgacg gatcagcagg cgctggcgga acgttttaac gatgtgccgc tgtggattcg
    12901 tccgcaaagt ttctttcaga ccaaccctac ggtcgccagc cgattatatg cgacggcgcg
    12961 cgactgggta gggcaattgc cggtacgcca tatgtgggat cttttttgcg gagtgggcgg
    13021 attcggcctg cactgcgcga cgccgcagat gcaattaacc ggtattgaga tcgcgccgga
    13081 ggcgattgcc tgcgcgaagc aatccgctgc cgagctggga ttaacccgcc ttcatttcca
    13141 ggcgctggat tccacccaat tcgccaccgc acaaggcgaa acgcccgatc tggtgttggt
    13201 gaatcctccc cgccgcggca ttggcaagcc gttgtgcgat taccttgcac aaatggcgcc
    13261 gcgttttatc atttattcga gctgtaacgc gcagacgatg gcgcaggata ttcgccatct
    13321 gccgaactac cgtattcaac gtgttcagct tttcgatatg ttcccccata ccgcgcatta
    13381 tgaagtgtta acactgcttt gcaggctgta gcgccaaaag ccaagcatac aaaatatcta
    13441 tattaactgt ctaattatcc ataaataata ataaccatga tcgatcgatg aaaaactccg
    13501 atcgatcatg gttatatatt accctatttt tgcaaatcaa atcacaaata atcactttaa
    13561 atcttttaat gactaatttt gattattaca gtgcgtgtaa ggcaaaatta gacaaggtgg
    13621 tttatcgggt aactttcaat agcatcagcg aagcaatacg taacgtcagt aaaggggtca
    13681 attatgacaa cgaatagaca cgcttatgga gggcgttcag acgatgtttg ccaaatttat
    13741 agatgttatt caaacgtttt taactgaacc ggcaatatta attgggatat tagtcggtgt
    13801 tggctatgcg ctggataaaa agacgcctat aaaaattatc accggtatga tcagcgcgat
    13861 ggtcggttta atgatggtgt tatttggcgg ctttcaattt tcagccactt ttaaaccggt
    13921 tgcagaagca gtcagcaagg cttatggcgt acatggatac ttaatggatt catacgccat
    13981 gaaagctgcg acgcaaatag cgctgggcga taatttcggc tatgtaggat acgtttttgt
    14041 actggcgttt tttactaacc tgatattagt tttatttggc cgttataccg gcgcaaaagg
    14101 tatatttctt accggtaata ccggggtctc tcattcacag gcggtactgt ggttaatcgt
    14161 cttctggcta gggttcggtt gggtacaatc cattgtgatt gccggggtat tgaccggggt
    14221 cttttgggcg ttttcaacca cgcttattgt taaacccatc gccaaagtga ccaataacgc
    14281 cggttttacc atcgcgcata accagatgct ggggctgtgg tttttctcga aattcgcgca
    14341 taaattcggc gatccggaaa agcatgacgc cgaaaacctg aaacttcccg gttggttagc
    14401 tatttttaac cacaacgtga cggcaatcgc cattgtgatg acgctcttcg ttggcggttt
    14461 tctattggcg acagggatcg ataacgtaca gttaatggcg aaaggcaaac cctggtatat
    14521 ctatattatc aatctgggcc tgcaattctc tatgtatatg gtcatcttgc tgcagggcgt
    14581 gcggatgatg gttggtgaaa ttaacggttc gtttaaagga tggcaggatc gctttattcc
    14641 taacgccata ccggctgtgg atgttgctgc tttattacct ttttcgccta acgcggccac
    14701 gctgggattc gtcttttgta ctttcggcac gattttttcc atgggcatcc tgctgctcat
    14761 ccatagccct attatggtat tgcctggttt tgttccgctc ttcttttccg gcggtcccat
    14821 cggcgtatta gccaaccgaa tggggggata tcgttccgtt attatttgta ctttcctgtt
    14881 agggattatt cagactttcg gtacggtatg ggccattcct ttaaccgggc tggcaaaaga
    14941 aggcgtgggc tggacgggaa tatttgactg ggcgactctg tggcctgcga tttgtgaatt
    15001 actgaaattt attgcttcaa cgttccatct tggtccttat tccatttaat tgattcggtt
    15061 tatatataaa ggattttatt atgaaagatt ctgtaaatat tttattcgta tgcggttatg
    15121 gtgtaggcag tagcgtaatg ttacagactg ttgttaaaaa agcgttagca aaatatgact
    15181 tctcttttga tatggagcat acggcagcgg gagaggtcgg tggatttacc gactgggcag
    15241 atatttatgc gatttcgaaa aaattgcttg atgttgttag cctcgatcct aaacacggac
    15301 aatatctcat tcccattgaa aatatcatgg atagcgaatc aataggtaaa cagatttacg
    15361 atgtggtaga gaaaaatttt ccgcacctgc tcaacaaatg agggtgagtc atgaaagcga
    15421 ttattctgct gtttgacagt ctgaataaaa actatttgcc gccctatggt gatttgctaa
    15481 cgaaagcgcc taactttcaa cgcctggcgg cacatgccgc cacctttgac aatagttatg
    15541 tcggcagtat gccctgtatg ccagcccgtc gggaactgca caccgggcgc tataatttcc
    15601 tgcatcgtga gtgggggccg ctggaaccct ttgatgattc catgccggaa ttattgaaaa
    15661 aagcggggat ctacacccat cttatcagcg atcatctgca ttactgggaa gacggcggcg
    15721 gtaactacca taaccgctat agctcctggg acgtagtacg cggtcaggag ggcgatcact
    15781 ggaaggcaag tgttggcgag ccgcccattc cggaagtact gcgcgttcca caaaaacaaa
    15841 ccggaggcgg cgtttccggg ctatggcgtc atgactgggc gaaccgcgaa tacatccagc
    15901 aggaagccga tttcccccag acgaaagttt ttgacgccgg gtgcgatttt atccataaaa
    15961 atcatgccga agataactgg ttattgcagg ttgagacgtt cgatccgcat gagccgtttt
    16021 ataccaccga ggaatattta tcgctctatg acgatgagtg gcaaggctcg cattatgact
    16081 ggccgcgcgg caaagtcagt gaaagtgagg aggcgatagc gcatattcgc tgtcgttatc
    16141 gggccctggt ttccatgtgc gaccgcaatc tgggacgtat ccttgatctg atggatgaac
    16201 acgatctctg gcgcgatacg atgctgattg tcggtaccga tcacggcttc ttgctggggg
    16261 agcacggttg gtgggctaaa aatcaaatgc cctattataa cgaggtggcg aataacccgc
    16321 tgtttatctg ggacccgcgc agcgcggtat gcggagcgcg acggcagtcg ctggtgcaga
    16381 tgattgactg ggcgccaacg ctactggatt attttcagca acctattccc gcagatatgc
    16441 agggccaacc tctggcgaaa gtcattgcca gtgatgaacc cgtcagggaa ggcgcgctgt
    16501 ttggcgtgtt tagcggacat gttaatgtta ccgacggacg ctatgtttat atgcgggccg
    16561 cgcagccggg gcgtgagcat gacattgcga actacacgtt aatgccgatc aagatgaatg
    16621 cgcgttatga cgtggatgaa ctgggaaaat tatctctggc acctccgttt aaattcacta
    16681 aagggcttca ggtattacgt attccggcca gggaaaaata taaaggtgtg aatagctttg
    16741 gtcatctctt gtttgatctc agagacgatc cgcagcagca acatcctatt catgatgagg
    16801 ccatcgaagc aaggatgatc aacttactta tccgtttgat gaaagaaaat gacgctccgg
    16861 cggagcagta tcgccgtctg ggtctggatg ttgtctaaaa acataacaat gttgtaagcc
    16921 gggtacgcgt tagcgtcacc cggcaagtat gagtccgaat cgcctgttga tgcaggcctt
    16981 tgagactgat gacaaactgt agaatgctca atggcgctgc gcttatcagg ccaggatagt
    17041 ttccgatagc ggcccgtggg ctgaataagg tatttatact gccatttcgc aacacggtgg
    17101 gctaatcaca tacgttttac tgcgggaacc actgatcgct gattttctga taagtgccgt
    17161 ccgctttaat ggcggccagc gcattattca gtttttccag caacgcctta ttgtccgggc
    17221 gcaccgcgat gccaagtccg gtaccgaagt attgcggatc ggtcactttc tctgttgccg
    17281 gacccagttg cggattcgtt ttcagccact cattgaccac tgcggtatcg ccaaagacgc
    17341 cgtcaatacg gccatttttc aggtcgataa tcgcattctg gtagctgtcg taggccacgg
    17401 ttttgacctc cggatgttta tcctggagat atttttgatg cgtggtgcca ttttccatac
    17461 cgatacgctt accttttaga tcggtaaagg ttttataggt gtcttttttg gcaatcacca
    17521 gcgcggagtt cgcataatag ggattgctaa aggcgacctg cttactgcgc tccggggtaa
    17581 tgtccattcc ggaaatgacg gcatcatatt ttctgaattt cagcgccggg ataagactat
    17641 cgaaagcatg attggtaaaa gtacattctg cctgcatttg cttgcataat gcggttgcca
    17701 gatcgatatc gaagcccaca attttattac tcgcatccag ggattcaaac gggggatagg
    17761 tggcggaaac cccgaaattg attttttcag cggcgatgct gccagtggcg aaagaggcga
    17821 gtaatgcagc cagaactaac tttttcatga tgtcactccc gtaatcttat gattatgcgc
    17881 cgtgtctgcg gcatagattt acaatgccat caattgaatt tgtatgcaat aaaaatgatt
    17941 aaatatttta aaatggataa aaaaagacgg acaagttaac cacttgtccg tcgggtttat
    18001 tcaatattat gcatcgtagg cttgataagc gcagcgccat ctgaccattg tcgaacggcg
    18061 gcgagaatgc cttatcctgc ctggttaatt gcgccgctca aacgccaggg ctttacgctc
    18121 aatcaaacgc atcatcagcg tcaatagacc gttgacgacc aggtaaatta cgcctgccgc
    18181 gccaaatacc accacatcgt aggtacgacc atagagcaac tgactgtacc ccatgacctc
    18241 catcaaggtg atggtatagg ccagcgaggt acttttgaag accagtacca cctcattaga
    18301 ataggaggag agggcgcgtt taaacgcata gggcaacaaa atcgccagcg tatctttctt
    18361 actcatcccc agcgcgccgc aggactgcca ctgaccttcc ggaatcgcgc gaatcgcgcc
    18421 ataaaatagc tgcgtggtgt aagcggcgct gtttagcgac aacgcgatca gtgcgcacag
    18481 ccacggttca gacagtagat gccagagtag cggatactct tgcagtgtcg ggaattgacc
    18541 gggtccgtag tagatcagga aaatttgcac caacaacggc gtaccggtaa acaacgtgat
    18601 atagccgcgc accagccaca ccacgaacgg cgtttttagc gtcaggatga tggtaaaaac
    18661 taacgccagc accaaagcga cggcaataga agccacggtc agcgtcaggc tggtgtgtag
    18721 cccttttagc agttcaggta agtactcaag cattagtccg gcctccgctc aaaacgtgtt
    18781 gcgcgcaggt ctatgcgttt gagaatgtac tgactgatca gcgtaatgac caggtaaata
    18841 gccgccgcaa taatgtacca gttaaacggt tcctgggtgc gtgtggcaat acttttggtc
    18901 tgcaacatca gatcgttaac gctgataagg ctgaccagag ccgtatcttt tagcaacacc
    18961 agccactgat tacccagccc tggcagggcg tgacgccaca tctgcggcat caccagacgg
    19021 aaaaaaatcg ccgtctttga taatcccagt gcctgacccg actcccactg accagacgga
    19081 acggctttca gcgcgccgcg tagcgtctgc gacgcatagg ccgcatacag cagggacaac
    19141 gcaatcacgc cgcacaggaa cggactgacg tcaaagttct caatctccat ttgcaccggg
    19201 atctgcgtaa aaccgagatg gagggtaaac ccgtcagaca gcgtaagcag gagttgcgag
    19261 gagccgaaat agataaacag caccaccaga atttccggca ggccgcgcaa aatagtgacc
    19321 agcgcggagc ctatccaggc aatcgggcgc cattttacgg actcccagac ggcaaagaac
    19381 atggctaacg cgaggccaat gatcagcgca cagacggcaa ggccgacggt catcccggcg
    19441 gcgcttgcta aaggaaaaaa ttcgttcatc aaagattact tctggaacca tttgttatag
    19501 atggtctcgt aagtcccatc tttcttcact ttttccagcg cagtattgaa tttctgctgc
    19561 agctcggtgt tgccctgacg taccgcgata cccaggccgg tgccgaaata atctttatcg
    19621 gtgactttat cgccgaccgg cgccagctta ggattggctt tcagccattc ggtcacgacc
    19681 gccgtgtcgc cgaaaacagc gtcgatacgg ccattttgta gatccagctt cgcgttctga
    19741 tagctgtcat acggtacggt ggtgatttcc ggatgcttat ccatgatgaa tttctggtgc
    19801 gtcgtaccgt tctgtacgcc gactttctta cctttcagtt gatcgacgct ggtgtatttg
    19861 ccctgctgac ccacgaacag cgcggagttg tcgtaatatg gcgtggtaaa cagcacctgc
    19921 ttttcacgtt ccggcgtgat atccattccc gccattacag cgtcgaagcg gcggaatttc
    19981 aggctgggga tcaggctgtc gaacgcctga ttggtaaagg tacaggaggc gtcgatctct
    20041 ttacatagcg cgttggccag gtcgacgtca aagccgacaa tcttgttatt agcatccatc
    20101 gattcgaacg gcggatagga cgcttcggtc gcaaaacgaa tggtctgggc tgctgtagcg
    20161 gaaaggctaa agcctgcaat tagcgcggca atcagaactt ttttcattgt cattgtcccg
    20221 aatcttagtg agagagatag tttttgaacg cttcggtctg agggtgagca aagcaacccg
    20281 catcaccgtg ctcgacgatg tgaccatttt ccatataaat cacacgactg gcggtcttac
    20341 gcgccacttc gacttcatgc gtaacgatca cctgagtaat gttcgtttcc gccagctcat
    20401 gaataatgct gacgatttga gcggtaattt ccgggtccag cgcggcggtc ggttcatcaa
    20461 acagcagcac ctgcggctcc atcatcagcg cgcgggcaat cgcgacgcgc tgctgctgac
    20521 cgccggaaag gtgcaacgga taacgatcgc tatagggctt cagacgtaaa cgctccagca
    20581 gcttttctgc gcgcgccagc gcctgatctt ttgtcagacc cagtacgcgg cagggcgctt
    20641 caatcagatt ctgcacaacg gtgagatgcg gccaaagatt atattgttga aagaccattc
    20701 cgacattttg acgtagctca cgaatcgcct tatcggacgg cgttttcgta aagtcaaaat
    20761 ggttcccggc gatagtcaga gtgccggagc gcggcatctc aagcagattg agtacacgca
    20821 gcagcgaact tttacccgcc ccgcttgggc caagcaacac cagcgtttcg ccttcggggc
    20881 aatccagcgt gatatcgaac agcgcctgat gcgcgccgta aaagcaatta atgccgttta
    20941 attgaatact cattgacact cgtatacagg cagtctgata gctattgaag ccgcagatag
    21001 tacctttcgc agaatagtta tgcaatattt atgcgttaaa agttaaatat atcccacatt
    21061 cttccctaaa catagcacaa aatagcagga ggaatagtag gtaagaagaa ttgtcggcat
    21121 cccgtgcaga atgccagaca atttacgggg ttatgggtgc aaaagcgggg aatactgact
    21181 gttaacggtt ttctatcgac tggcgcagcg taccggcagg ggcatggaca tctccgccca
    21241 gatagcgaac gtcgtcaatc acccagcatg agccttcgtg aatcataagc acttcatcct
    21301 gccagctttg atcgccctgt tttaacgcca cccgcagagg aatattgcgc gcatctcggt
    21361 tcggaatggt tgatgcgctg gcgacgttgg cgctatccgg cagcgtagcg cggctggaga
    21421 acatatcgcc gctcatcaac tggcggtgtt ccgtatcgcg gctggcgtcg gtcaacaatt
    21481 tcgccaggtt atcactcaag taggggcgaa gcgcggcgat atcattgctg tggtgttgaa
    21541 tacggtagtc gtaaaattgt tgagccacgc tgtccgggcc gccttccaca cacgcgccga
    21601 tacgcgggcc attatctttg taggcgggag tgacggtcgt acaggcgcta agcagaagcg
    21661 cgcacgggat gagcaaagag agtttagaat agcgcatgat gatttcctta taggcgatcg
    21721 agcaaaaacc gatctacgat aatcaattat atcctttcaa tgatagcgta tcagcttgat
    21781 aatgcgtttg agatcgtgtg cttagctaac ccgggagatt cactatgcag ttttcaacaa
    21841 ccccaacgct ggaaggacaa agcatcgtgg agtattgcgg tgtggtaacg ggcgaagcca
    21901 ttttaggcgc caatattttc cgcgattttt tcgccggcat tcgggatatc gtcggcggac
    21961 gttccggcgc gtatgagaaa gagctgcgta aagcgcgtga aatcgctttt caggaacttg
    22021 gcgagcaggc taaagcgttg ggcgccgatg cggtggtagg catcgatatt gattacgaaa
    22081 ctgtcggcaa ggatggcagt atgctgatgg tcagcgtcag cggaacggcg gtgaaaacgc
    22141 gccgatgaaa gcgctactgt ggctggttgg tctcgcgttg ctgttaacag gctgcgcgag
    22201 cgaaaaagga attatcgata aagagggata tcagcttgat acccgacatc gggcgcaggc
    22261 ggcctatccg cgcattaaag tcctggtgat tcactatacg gcggaaaact ttgacgtttc
    22321 gctggcgacg ttaacgggtc gcaacgtcag ttcgcattac ctgattcccg caaccccgcc
    22381 attatatggc ggtaaaccgc gcatctggca actggtgccg gaacaggatc aggcttggca
    22441 tgcgggcgtc agtttctggc gaggcgccac gcgtctcaat gatacgtcta ttggcattga
    22501 gctggaaaat cgcggctggc gaatgtccgg cggggtgaaa tctttcgcgc cgtttgaatc
    22561 cgcgcaaatt caggcattga tcccgttagc gaaggacatt atcgcgcgct atgacatcaa
    22621 accgcagaat gtggt
//
LOCUS       DAGWFR010000058        22611 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.059, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000058 DAGWFR010000000
VERSION     DAGWFR010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 22611)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22611)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22611
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.059"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..408
                     /locus_tag="MOX77_002257"
     CDS             <1..408
                     /locus_tag="MOX77_002257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis GfcC family protein"
                     /protein_id="HCA3357777.1"
                     /translation="GRQFVNLDPDVVRVSERGNPPLQGHYTLWVGPQPTQVTLFGLIS
                     QPGSQPFVPGRDVASYLEGQRLLSGADRSYAWVVYPDGRSQKAPVAYWNKRHIEPMPG
                     SIIFVGFADSLWRGTPEAINADILHTLTQRIPE"
     gene            408..2504
                     /locus_tag="MOX77_002258"
     CDS             408..2504
                     /locus_tag="MOX77_002258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjbH domain-containing protein"
                     /protein_id="HCA3357778.1"
                     /translation="MKKTHLLSVLALGISAACHAETYPAPVGPSQSDFGGVGLLQTPT
                     ARMAREGEMSLNYRDNDQYRYYSASVQLFPWLETTLRYTDVRTKKYSSVESFSGDQTY
                     KDKAFDVKLRLWEESYWMPQVAVGARDIGGTGLFDAEYIVASKAWGPFDFSLGLGWGY
                     LGTSGNVSNPFCSYSDKFCSRDNSYKEAGSVDGSDMFHGPASLFGGVEYQTPWQPLRL
                     KLEYEGNNYQQDFAGKLEQKSKFNVGAIYCVTDWADVNLSYERGNTFMFGVTLRTNFN
                     DLRPAYHDNSRPQYRPQPQDAILQHSVVANQLTLLKYNAGLADPKIQVKGDTLYVTGE
                     QVKYRDSREGIVRANRIVMNDLPEGIRTIRVTENRLNLPQVTTETDVASLKRHLEGEP
                     LGHETPLAQKRVEPIVPESTEQGWYIDKSRIDFHLDPVLNQSVGGPENFYMYQLGVMG
                     TADLWVTDHLLTTGSVFANIANNYDKFNYTNPPKDSHLPRVRTHVREYVQNDVYVNNL
                     QANYFQYFGNGFYGQVYGGYLETMFGGAGAEVLYRPVDSNWAFGLDANYVKQRDWRSA
                     QDMMKFTDYSVKTGHLTAYWTPSFAQDVLVKASVGQYLAGDKGGTLEIAKRFDSGVVV
                     GGYATITDASPDEYGEGDFTKGVYVSVPLDLFSSGPTRSRAAIGWTPLTRDGGQQLGR
                     KFGLYDMTSDRSVNFR"
     gene            2647..3057
                     /gene="psiE"
                     /locus_tag="MOX77_002259"
     CDS             2647..3057
                     /gene="psiE"
                     /locus_tag="MOX77_002259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate-starvation-inducible protein PsiE"
                     /protein_id="HCA3357779.1"
                     /translation="MMPLSRSRLEFIATILQNVLNLGLLTLGLILVVFLGKETVHLAD
                     ALFAPEQASKYELVEGLVIYFLYFEFIALIVKYFKSGLHFPLRYFVYIGITAIVRLII
                     VDHKTPMDVLLYSAAILLLVITLWLCNSNRLRRE"
     gene            complement(3223..4113)
                     /gene="malG"
                     /locus_tag="MOX77_002260"
     CDS             complement(3223..4113)
                     /gene="malG"
                     /locus_tag="MOX77_002260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose ABC transporter permease MalG"
                     /protein_id="HCA3357780.1"
                     /translation="MAMVQPKSQKLRLFITHLGLLIFIAAIMFPLLMVIAISLREGNF
                     ATGSLIPDKISWEHWRLALGFSVEHADGRVTPPPFPVLLWLWNSVKIAGITAIGIVAL
                     STTCAYAFARMRFPGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQYIPFIGLNTHG
                     GVIFAYLGGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVV
                     FILSFIAAITEVPVASLLLRDVDSYTLAVGMQQYLNPQNYLWGDFAAAAVLSAIPITL
                     VFLLAQRWLVNGLTAGGVKG"
     gene            complement(4128..5672)
                     /gene="malF"
                     /locus_tag="MOX77_002261"
     CDS             complement(4128..5672)
                     /gene="malF"
                     /locus_tag="MOX77_002261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose ABC transporter permease MalF"
                     /protein_id="HCA3357781.1"
                     /translation="MDVIKKKHWWQSDQLKWSVIGLLGLLVGYLVVLMYVQGEYLFAI
                     MTLILSSAGLYIFANRKTYAWRYVYPGLAGMGLFVLFPLVCTIAIAFTNYSSTNQLTF
                     ERAQQVLMDRSYQAGKTYNFGLYPAGDEWQLALTDGETGKHYLSGAFSFGGEQKLQLK
                     ETDALPGGERANLRIITQNRLALNQITAVLPDESKVVMSSLRQFSGTRPLYTLADDGL
                     LTNNQSGVKYRPNNDSGYYQSINADGSWGDEKLSPGYTVTIGAKNFTRVFTDEGIQKP
                     FFAIFVWTVVFSVLTVVLTVAVGMVLACLVQWEALKGKAIYRVLLILPYAVPSFISIL
                     IFKGLFNQSFGEINMMLSALFGIKPAWFSDPNTARAMVIIVNTWLGYPYMMILCMGLL
                     KAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNNFVLIQLLTNG
                     GPDRLGTTTPAGYTDLLVSYTYRIAFEGGGGQDFGLAAAIATLIFLLVGALAIVNLKA
                     TRMKFD"
     gene            complement(5804..6994)
                     /gene="malE"
                     /locus_tag="MOX77_002262"
     CDS             complement(5804..6994)
                     /gene="malE"
                     /locus_tag="MOX77_002262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000695396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose/maltodextrin ABC transporter
                     substrate-binding protein MalE"
                     /protein_id="HCA3357782.1"
                     /translation="MKIKTGVGILALSALTTMMISAPALAKIEEGKLVIWINGDKGYN
                     GLAEVGKKFEQDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLL
                     AEVTPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLVPNPPKTWEEIPA
                     LDKELKAKGKSAIMFNLQEPYFTWPLIAADGGYAFKFENGKYDVKDVGVDNAGAKAGL
                     TFLIDMIKNKNMSADTDYSIAEAAFNKGETAMTINGPWAWSNIDKSKVNYGVTLLPTF
                     KGKPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDQGLEAVNKDKPLGAVALKSFQ
                     EQLAKDPRIAATMDNAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDAALKDAQS
                     RITK"
     gene            7356..8465
                     /gene="malK"
                     /locus_tag="MOX77_002263"
     CDS             7356..8465
                     /gene="malK"
                     /locus_tag="MOX77_002263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011915502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose/maltodextrin ABC transporter ATP-binding
                     protein MalK"
                     /protein_id="HCA3357783.1"
                     /translation="MASVQLRNVTKAWGDVVVSKDINLDIHDGEFVVFVGPSGCGKST
                     LLRMIAGLETITSGDLFIGETRMNDIPPAERGVGMVFQSYALYPHLSVAENMSFGLKL
                     AGAKKEVMNQRVNQVAEVLQLAHLLERKPKALSGGQRQRVAIGRTLVAEPRVFLLDEP
                     LSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKP
                     LELYHYPADRFVAGFIGSPKMNFLPVKVTATAIEQVQVELPNRQQIWLPVESRGVQVG
                     ANMSLGIRPEHLLPSDIADVTLEGEVQVVEQLGHETQIHIQIPAIRQNLVYRQNDVVL
                     VEEGATFAIGLPPERCHLFREDGSACRRLHQEPGV"
     gene            8555..9913
                     /locus_tag="MOX77_002264"
     CDS             8555..9913
                     /locus_tag="MOX77_002264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltoporin"
                     /protein_id="HCA3357784.1"
                     /translation="MMITLRKLPLAVAVAAGVMSAQAMAVDFHGYARSGIGWTGSGGE
                     QQCFQVTGAQSKYRLGNECETYAELKLGQEVWKEGDKSFYFDTNVAYSVNQQNDWEST
                     DPAFREANVQGKNLIEWLPGSTIWAGKRFYQRHDVHMIDFYYWDISGPGAGIENIDLG
                     FGKLSLAATRSTEAGGSYTFSSQNIYDEVKDTANDVFDVRLAGLQTNPDGVLELGVDY
                     GRANTTDGYKLADGASKDGWMFTAEHTQSMLKGYNKFVVQYATDAMTTQGKGQARGSD
                     GSSSFTEELPDGTKINYANKVINNNGDMWRILDHGAISLGDKWDLMYVGMYQNIDWDN
                     NLGTEWWTVGVRPMYKWTPIMSTLLEVGYDNVKSQQTGDRNNQYKITLAQQWQAGDSI
                     WSRPAIRIFATYAKWDEKWGYIKDGDNISRYAAATNSGISTNSRGDSDEWTFGAQMEI
                     WW"
     gene            10077..10994
                     /gene="malM"
                     /locus_tag="MOX77_002265"
     CDS             10077..10994
                     /gene="malM"
                     /locus_tag="MOX77_002265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose operon protein MalM"
                     /protein_id="HCA3357785.1"
                     /translation="MKMKKSLVALCLTAGLFASVPGISLAEVNYVPQNTSAAPAIPAA
                     ALQQLTWTPVDQSKTQSTQLATGGQRLDVAGITGPVAAYSVPANIGELTLTLTSEVNK
                     QASVFAPNVLILDQNMTPSAFFPSSYFTYQQPGVMSADRLEGVMRLTPALGQQKLYVL
                     VFTTEKDLQQTTTLLDPAKAYAKGVGNSIPDIPDPVARHTTDGVVKLKVKTNSSSSVL
                     VGPLFGSSGTGPVTVGNTAAPVAAPAPVAPKKSEPMLNDTESYFNKAIKDAVAKGDVD
                     KALKLLDEAERLGSTSARSTFISSVKGKG"
     gene            11175..11672
                     /gene="ubiC"
                     /locus_tag="MOX77_002266"
     CDS             11175..11672
                     /gene="ubiC"
                     /locus_tag="MOX77_002266"
                     /EC_number="4.1.3.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate lyase"
                     /protein_id="HCA3357786.1"
                     /translation="MSHPALTQLRALRYFDAIPALEPHLLDWLLLEDSVTKRFEQQGK
                     RVSVTLIREAFVGQSEVEEASGLLPSESRYWLREILLCADGEPWLAGRTVVPESTLCG
                     PEQVLQHLGKTPLGRYLFTSSTLTRDFIEIGRDATLWGRRSRLRLSGKPLLLTELFLP
                     ASPLY"
     gene            11686..12558
                     /gene="ubiA"
                     /locus_tag="MOX77_002267"
     CDS             11686..12558
                     /gene="ubiA"
                     /locus_tag="MOX77_002267"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HCA3357787.1"
                     /translation="MEWSLTQSKLLAFHRLMRTDKPIGALLLLWPTLWALWVATPGMP
                     QLWILAVFVAGVWLMRAAGCVVNDYADRKFDGHVKRTVNRPLPSGAVTEKEARNLFVV
                     LVLLAFLLVLTLNAMTILLSVAALALAWVYPFMKRYTHLPQVVLGAAFGWSIPMAFAA
                     VSESLPLSCWLMFLANILWAVAYDTQYAMVDRDDDIKIGIKSTAILFGRYDTLIIGIL
                     QLGVMALMALIGWLNGLGWGYYWAVLVAGALFVYQQKLIANREREACFKAFMNNNYVG
                     LVLFLGLAMSYWHF"
     gene            complement(12657..15077)
                     /gene="plsB"
                     /locus_tag="MOX77_002268"
     CDS             complement(12657..15077)
                     /gene="plsB"
                     /locus_tag="MOX77_002268"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsB"
                     /protein_id="HCA3357788.1"
                     /translation="MSGWPRIYYKLLNLPLSILVKSKSIPAEPAQELGLDTSRPIMYV
                     LPYNSKADLLTLRAQCLAHDLPDPLEPLEIDGALLPRYVFIHGGPRVFTYYTPKEESV
                     KLFHDYLDLHRSNPALDVQMVPVSVMFGRAPGREKGEENPPLRMLNGVQKFFAISWLG
                     RDSFVRFSPSVSLRRMADEHGTDKIIAQKLARVARMHFARQRLAAVGPRLPARQDLFN
                     KLLASKAIARAVEDEARSKKISHEKAQQNAIALMEEIAANFSYEMIRLTDRILGFTWN
                     RLYQGINVHNAERVRQLAHDGHEIVYVPCHRSHMDYLLLSYVLYHQGLVPPHIAAGIN
                     LNFWPAGPIFRRLGAFFIRRTFKGNKLYSTVFREYLGELFSRGYSVEYFVEGGRSRTG
                     RLLDPKTGTLSMTIQAMLRGGTRPITLVPIYIGYEHVMEVGTYAKELRGATKEKESLP
                     QMLKGLSKLRNLGQGYVNFGEPMPLMTYLNQHVPEWRESIDPIEAIRPAWLTPTVNSI
                     AADLMVRINNAGAANAMNLCCTALLASRQRSLTREQLTEQLDCYLDLMRNVPYSTDST
                     VPAASAGELIAHALQMNKFEVEKDTIGDIIILPREQAVLMTYYRNNIAHMLIMPSLMA
                     AIITQHRRISRDALQQHVEALYPMLKAELFLRWEREELASVIDALASEMQRQGLITLQ
                     DDELHINPTHSRTLQLLAAGARETLQRYAITFWLLSANPSINRSTLEKESRTVAQRLS
                     VLHGINAPEFFDKAVFSSLVLTLRDEGYISDTGDAEPAETMKIYQMLADLITSDVRLT
                     IESATQGE"
     gene            15248..15616
                     /locus_tag="MOX77_002269"
     CDS             15248..15616
                     /locus_tag="MOX77_002269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HCA3357789.1"
                     /translation="MANNTTGFTRIIKAAGYSWKGFRAAWTHEAAFRQESLAVLLGVI
                     IACWLDVDAITRVLLIGSVLLIMIVEILNSAIEAVVDRIGSEYHELSGRAKDMGSAAV
                     LLSIFVALMTWGILLWSHFR"
     gene            15725..16333
                     /gene="lexA"
                     /locus_tag="MOX77_002270"
     CDS             15725..16333
                     /gene="lexA"
                     /locus_tag="MOX77_002270"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000646075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="repressor LexA"
                     /protein_id="HCA3357790.1"
                     /translation="MKALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAE
                     EHLKALARKGVLEIVSGASRGIRLLQEEEDGLPLVGRVAAGEPLLAQQHIEGHYQVDP
                     SLFKPSADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKK
                     QGNKVELLPENSEFTPIVVDLREQSFTIEGLAVGVIRNGEWL"
     gene            16512..17837
                     /gene="dinF"
                     /locus_tag="MOX77_002271"
     CDS             16512..17837
                     /gene="dinF"
                     /locus_tag="MOX77_002271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter DinF"
                     /protein_id="HCA3357791.1"
                     /translation="MPLFTSSDKALWRLALPMIFSNITVPLLGLVDTAVIGHLDSPVF
                     LGGVAVGATATSFLFMLLLFLRMSTTGLTAQAFGAKNPQALARALIQPLLLALGAGVM
                     IVLFRTPLIELALHIVGGNDAVLVQARRFLEIRWLSAPASLANLVLLGWLLGVQYARA
                     PVILLVVGNILKIALDLWLVMGLHMNVQGAALATVIAEYVTLLIGLMMVRKVLHLRGV
                     SLDMLKQAWRGNVRRLLALNRDIMLRSLLLQLCFGAITVSGARLGSDIIAVNAVLMTL
                     LTFTAYALDGFAYAVEAHSGQAYGARDGSKLLDVWRAACRQSGIVALLFSTVYALAGE
                     HIVALLTSLPQIQLLADRYLIWQVVLPLVGVWCYLLDGMFIGATRAAEMRNSMAVAAG
                     GFALTLFALPVLGNHGLWLALTVFLALRGLSLSLIWRRHWREGTWFARS"
     gene            17834..17947
                     /locus_tag="MOX77_002272"
     CDS             17834..17947
                     /locus_tag="MOX77_002272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357792.1"
                     /translation="MMVKNSEYKTEGRIPAYNYYHVQQKLQCIWANNTCYS"
     gene            17969..18178
                     /locus_tag="MOX77_002273"
     CDS             17969..18178
                     /locus_tag="MOX77_002273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbD family protein"
                     /protein_id="HCA3357793.1"
                     /translation="MNKDEAGGNWKQFKGKMKEQWGKLTDDDMTVIEGKRDQLVGKIQ
                     ERYGYQKDQAEKEVVDWETRNNYRW"
     gene            complement(18278..18793)
                     /gene="zur"
                     /locus_tag="MOX77_002274"
     CDS             complement(18278..18793)
                     /gene="zur"
                     /locus_tag="MOX77_002274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc uptake transcriptional repressor Zur"
                     /protein_id="HCA3357794.1"
                     /translation="MEKTTTQELLAQAEKLCAQRNVRLTPQRLEVLRLMSLQQGAISA
                     YDLLDLLRETEPQAKPPTIYRALDFLLEQGFVHKVESTNSYVVCHLFDQPTHSSAMFI
                     CDRCGVVKEECAEGVEDIMHTLAAKMGFALRHNVIEAHGLCPACVEVEACRHPGDCGH
                     DHSVLVKKKPR"
     gene            19040..20350
                     /locus_tag="MOX77_002275"
     CDS             19040..20350
                     /locus_tag="MOX77_002275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraF"
                     /protein_id="HCA3357795.1"
                     /translation="MNKNVKLSLIAIAVSLFMTKQAGAANTWTEARNDAMGGTGVASA
                     NYGSGVLLNPALLAKAKPEDNITVVLPAVGVQITDKDNLQDEIDDISDKVDYYDEVVD
                     NLTLGQILLNPRGVLNQFQGAARDLADELEYLNGKTARANAGAGLAVSIPGQTLSVAF
                     IAKGYAHGRVSSSIDQNDIQYLRDIQHDERVALREAGRAALLGSDEITKHLNSTALGR
                     VAIVSDYGIALAKQFVVGEVPVSIGVTPKLQKTWLYNYTTSIYNYDSSDWNSSRYRND
                     DTGFNIDAGLAADIGENWTLGLSGQNLVSRDIDTKDIYITNGMTGETTNYKETYQIRP
                     LVTAGIAWHNDLLTVSADGDLTETKGFKSEDNSQYVGVGAEVRPLSWLAVRAGYRADV
                     KNNDSNVVTGGLGFAPFNRAHLDLMGLYGEDETWGAGAQLTMTF"
     gene            20438..21436
                     /gene="dusA"
                     /locus_tag="MOX77_002276"
     CDS             20438..21436
                     /gene="dusA"
                     /locus_tag="MOX77_002276"
                     /EC_number="1.3.1.-"
                     /EC_number="1.3.1.91"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(20/20a) synthase DusA"
                     /protein_id="HCA3357796.1"
                     /translation="MQPETQSSALPAYRFSIAPMLDWTDRHCRYFLRLLSRQTLLYTE
                     MVTTGAIIHGKGDYLAYSEEEHPVALQLGGSDPAQLAHCAKLAEARGYDEINLNVGCP
                     SDRVQNGMFGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYAFLCDFINT
                     VSGQGECEMFIIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKS
                     LEEAKEHLRHMDGVMVGREAYQNPGILAAVDREIFGADTTDTDPVAVVRAMYPYIERE
                     LSQGAYLGHITRHMLGLFQGIPGARQWRRYLSENAHKAGADAAVLEQALKLIADKR"
     gene            21604..21846
                     /gene="pspG"
                     /locus_tag="MOX77_002277"
     CDS             21604..21846
                     /gene="pspG"
                     /locus_tag="MOX77_002277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress response protein PspG"
                     /protein_id="HCA3357797.1"
                     /translation="MLELLFVLGFFLMLMVTGVSLLGILAALVVATAVMFLGGMFALM
                     IKLLPWLLLAVAVVWVIKAVKTPKIPQYQRNNRRFY"
     gene            complement(22021..>22611)
                     /locus_tag="MOX77_002278"
     CDS             complement(22021..>22611)
                     /locus_tag="MOX77_002278"
                     /EC_number="1.6.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH:quinone reductase"
                     /protein_id="HCA3357798.1"
                     /translation="LRKTYEVKPDEPFLFHAAAGGVGLIACQWAKALGAKLIGTVGSA
                     QKAQRALDAGAWQVINYREESIVERVKEITGGKKVRVVYDSVGKDTWEASLDCLQRRG
                     LMVSFGNASGPVTGVNLGILNQKGSLYATRPSLQGYITTREELTEASNELFSLIASGV
                     IKVDVAENQRYALKDARRAHEVLESRATQGSSLLIP"
BASE COUNT         5135 a         5796 c         6294 g         5386 t
ORIGIN      
        1 ggcagacaat tcgtgaatct tgatcctgac gtggtgcggg tgagcgaacg aggtaacccg
       61 ccgctgcaag gtcactacac gctctgggtc gggccgcaac ccacgcaggt gacgctcttt
      121 ggcttgatta gccagccggg cagccagccg ttcgtccctg ggcgggacgt cgccagttat
      181 cttgaggggc agcgcttact cagcggcgcg gatcgtagct atgcctgggt ggtttaccct
      241 gatggacgca gccaaaaagc gccggtggct tactggaata aacgtcatat cgagccgatg
      301 cccggcagca tcatttttgt cggttttgcc gattcccttt ggcgcggcac gccggaggcg
      361 ataaatgccg acattcttca taccctgacg cagcggatac cggaataatg aaaaaaacac
      421 atctgctcag cgtgctggcg ctgggtatta gcgcggcctg ccatgccgaa acatatccag
      481 cccctgttgg gccttcacaa tctgactttg gcggcgtggg cctgctgcaa acgccgacag
      541 cgcgtatggc gcgtgaaggg gagatgagcc tgaactatcg cgataacgat cagtaccgct
      601 actactcggc ttcggttcag cttttcccgt ggctggaaac cacgttgcgc tataccgatg
      661 tccgtacgaa aaagtacagc agcgtggaat cattctccgg cgaccagact tacaaagata
      721 aagcgtttga tgtgaaactg cggttgtggg aagagagtta ctggatgccg caggtggcgg
      781 ttggcgcgcg cgatatcggc gggacggggc tgtttgatgc ggaatatatt gtagcgagta
      841 aggcttgggg gccatttgat ttttcattag gtctcggctg gggctatctt ggcaccagcg
      901 gcaatgtgtc taatcctttc tgttcgtata gtgataaatt ctgttcgcgt gataacagct
      961 ataaagaggc cggttccgtc gacggtagcg atatgtttca cggcccggct tcgctgtttg
     1021 gcggcgtgga ataccagacc ccgtggcaac cgctacgcct gaagctggag tatgaaggca
     1081 ataactatca gcaggatttt gcggggaaac tggaacagaa gagcaagttt aacgtcggcg
     1141 ccatttactg cgtcaccgat tgggccgacg ttaacctcag ctacgagcgc ggcaacacct
     1201 ttatgtttgg cgttacgctg cgcaccaatt tcaacgattt acgtcccgcg tatcatgaca
     1261 attcacgccc gcaataccga ccacagccgc aggatgccat cctgcaacat tcggtagtgg
     1321 ctaatcaatt aacgttattg aaatataatg ccggtctggc ggacccgaaa atccaggtca
     1381 aaggcgatac gctatacgtt accggtgaac aggtgaagta ccgcgactcc cgtgagggga
     1441 tcgtgcgcgc taaccggatc gtcatgaacg atctgccgga ggggatccgc acgatccgcg
     1501 tgacggaaaa ccgccttaat ctgccgcagg tcaccactga aaccgatgtc gccagcctga
     1561 aacgccatct ggaaggcgaa ccgctgggac atgaaactcc gctggcgcaa aaacgcgtgg
     1621 agccgatcgt gccagagagt actgaacagg gttggtatat cgacaagtcg cgcattgatt
     1681 ttcatcttga tcccgtgctg aatcagtcgg taggcggccc ggaaaacttc tatatgtatc
     1741 agttgggcgt aatgggaact gcggatctgt gggtcacgga tcatctgctc accacgggca
     1801 gcgtgtttgc caatatcgcc aacaactacg acaaatttaa ctacaccaat ccaccgaagg
     1861 actcgcatct gccgcgggtg cgtacgcatg tccgtgagta tgtgcagaat gatgtttatg
     1921 tgaataacct acaggccaac tacttccagt attttggcaa tggtttctat gggcaggtct
     1981 atggcggtta tctggagacc atgtttggcg gtgccggggc ggaagtcctg tatcgcccgg
     2041 tagacagcaa ttgggcgttt ggtctggatg ccaactacgt gaaacagcgt gactggcgta
     2101 gcgcgcagga tatgatgaag tttaccgatt acagcgtgaa gaccggacat ttgaccgcat
     2161 actggacgcc gtcgttcgcc caggatgtgc tggtgaaagc cagcgttggt cagtatctgg
     2221 cgggcgataa aggcggtacg ctggagatcg ccaaacgctt cgatagcggc gtcgttgtcg
     2281 gcggttacgc gacgattacc gatgcgtcgc cggatgaata tggggaaggg gattttacca
     2341 aaggcgtata tgtttccgta ccgctggatc tcttctcgtc cggcccaacc cgaagtcgtg
     2401 cggcaattgg ctggacgccg ctgacgcgtg acggtggtca acagcttggc cgtaagtttg
     2461 gcctgtatga tatgaccagt gacaggagcg taaatttccg ttaatactca ggccggataa
     2521 ggcgttcacg gcgctatccg gcaaattacc ttattgaaca aaatataaac acaaataaaa
     2581 aatatagatg cccgtcacat ttgtgcgtta tacagaaacc tcgccgcaga gaaagagggg
     2641 gctgttatga tgccattatc gcgctcacgt cttgagttta tcgccacgat tttacaaaac
     2701 gtactaaatt tggggctgct taccctcggt ctgatcctgg tcgtttttct cggtaaagag
     2761 acggtgcatc tggcggacgc attattcgcg cctgagcaag ccagcaaata tgaactggtg
     2821 gaagggctgg tgatctactt tctttatttc gaatttattg cgctgattgt gaagtacttt
     2881 aagtctggcc ttcactttcc gctgcgctat ttcgtgtaca ttgggatcac ggcgattgtg
     2941 cgtctgatca ttgtcgatca taaaacgcca atggatgtat tactctattc ggcggcgatc
     3001 ctcctgttgg ttatcacgtt gtggttatgt aattcgaacc gactacggcg agaataggcg
     3061 tcgccacacc gtaacggacg tatggcgtgg caataaatta gccgctgtct ataacgcata
     3121 aaaaaagcgc tccgaagagc gccaaaatac gaccataagt ggggataaca taacttgagg
     3181 gcagtggcat tgcccgttgc cgggcaggta cttcgataaa acttaacctt tcacaccccc
     3241 tgccgtcagg ccgttgacca gccaacgttg cgccaacagg aacaccaggg tgataggaat
     3301 agctgaaagg acggcggcgg cggcaaagtc gccccacaaa tagttttgcg ggttgagata
     3361 ttgctgcata cccacggcca gcgtatagct gtccacatcg cgcagtaaca acgaggcgac
     3421 cggaacttcg gtaatcgccg cgatgaacga cagaataaac accaccgcca gaatcggtac
     3481 ggaaagcggc agcagcacca gacgaaatgc ctgccacggg gttgcgccat ccagcgcggc
     3541 ggcctcttcc agcgagctgt cgatagtttc gaagtagcct ttaattgtcc agacgtgcag
     3601 cgcgatgccg ccaagatagg cgaagatcac gccgccatgc gtattcagac cgataaatgg
     3661 aatgtattgt cccaggcggt caaataacgc atacagcgcc accagagaca aaaccgccgg
     3721 aaacatctgg aaaatcagca tccctttgag cagtgttgct ttacctggaa aacgcattcg
     3781 tgcgaaagcg taggcgcagg tggtggagag cgccacgatg ccgatggcgg taataccggc
     3841 gattttcacc gagttccaca gccacagcag gaccgggaag ggaggcggcg ttacccgacc
     3901 atccgcatgt tccacgctga aacccagcgc cagccgccag tgttcccagg agattttatc
     3961 cgggatcagg cttccggtgg cgaagttccc ttcacgtagc gagatagcga tgaccatcag
     4021 cagcgggaac ataatcgccg cgatgaaaat cagcagcccc aggtgcgtga tgaagagacg
     4081 cagtttctga gatttgggtt ggaccatagc cattgttatt atctccctta atcaaacttc
     4141 atacgcgtgg ctttcaggtt cactattgcc agcgcgccta ccagcaggaa gatcagcgtg
     4201 gcaatggccg ccgccagacc gaagtcctga ccgccgccgc cttcaaaggc gatacggtag
     4261 gtgtagctga cgagcagatc ggtataaccg gcaggcgtgg tggtgccgag acggtctggc
     4321 ccgccgttgg tcaataactg aatcaggaca aagttattaa agttaaaggc gaagctggcg
     4381 atcatcagcg gcgttagcgg cttaatcagc agcggtaagg tgattttaaa gaaattctga
     4441 aatggaccag cgccgtccat tgcggaggct tcgtacaggt catccggaat cgctttcagc
     4501 agtcccatgc acaggatcat catgtaggga tagcccagcc aggtattcac gataatcacc
     4561 attgcccgcg cggtgttggg gtcgctgaac caggcaggtt taatgccaaa cagcgcgctc
     4621 agcatcatat tgatttcgcc aaagctttgg ttgaataacc ctttgaaaat caaaattgaa
     4681 ataaacgacg gtacggcgta gggcagaatc agcaggacgc ggtagatagc tttacctttc
     4741 agcgcttccc actgtacgag gcaggccaat accatcccaa ccgccacggt taacaccaca
     4801 gtgaggaccg aaaagaccac ggtccagacg aagatagcga aaaaaggctt ctggatccct
     4861 tcgtcggtaa agacgcgcgt aaagtttttc gcgccgatag taacggtata accaggactg
     4921 agtttttcat caccccagct tccgtcggcg ttgatcgact gataataacc gctatcgttg
     4981 tttggccggt attttacgcc gctctggtta ttggtaagca ggccgtcatc agccagtgtg
     5041 tacagcggac gggtaccgga aaactgacgc agcgagctca taaccacttt actttcatcc
     5101 ggcaggacgg cggttatctg gttcagcgcc agacggttct gggtgattat ccgcagattg
     5161 gcgcgttcgc cgcccggcag ggcatcggtc tctttcagct gtaatttttg ttcgccgccg
     5221 aaggaaaatg cgccagacag gtaatgtttg cccgtttctc cgtcggtgag ggccagttgc
     5281 cactcgtcgc cggccgggta aagaccgaag ttataggttt ttcccgcctg ataagaacgg
     5341 tccatcagca cttgctgggc gcgttcaaag gtgagctggt tggtgctgct gtagttagta
     5401 aaggcgatgg cgatggtgca caccagcggg aatagcacaa acagccccat gccggcgagg
     5461 ccagggtaaa cgtagcgcca ggcataggtt ttacgatttg cgaaaatata caggccagca
     5521 gagcttaaaa tcagcgtcat gatggcgaac agatactccc cttgtacgta cattaaaact
     5581 acaaggtaac ccaccagcag gcccagcaga ccaattactg accatttaag ctggtcgctt
     5641 tgccaccagt gtttcttttt aatgacatcc atgggggttt tcctctacag cgttgaaact
     5701 tcctggccgg agatgtgcct gatggcgctg cgcttatcag gcctacggtg tgttgtaggc
     5761 cggataaggc atttatgccg ccatccggca caggctcgcg gcattacttg gtgatacggc
     5821 tttgtgcatc tttcagcgcg gcatccacgg tttgacggcc gctggcggcg ttaatcacag
     5881 ccgtacgtac cgcataccag aaggcggaca tctgcggaat attcggcatg atctcgcctt
     5941 tctgggcgtt atccatggtg gcggcgatac gggggtcttt cgctaactgc tcctggaaag
     6001 atttcagcgc cacggcgccc agcggtttgt ctttgttcac cgcctccaga ccctgatcgg
     6061 tcagcaggta gttttcgagg aactctttcg ccagctcttt attcgggctg gcagcgttaa
     6121 tccccgcgct cagcacgccg acgaacggtt tcgagggttt acctttgaag gtcggcagca
     6181 gggtgacacc gtagttgact ttgctcttgt cgatgttcga ccatgcccac ggaccgttga
     6241 tggtcattgc cgtttcgcct ttattgaagg ctgcttcggc gatggagtaa tcggtatcgg
     6301 cgctcatatt tttgttcttg atcatatcga tcaggaaagt cagacctgct ttcgcgccgg
     6361 cgttgtcgac gccaacgtct ttcacgtcat acttgccgtt ttcaaatttg aacgcgtaac
     6421 cgccgtcagc ggcgatcaaa ggccaggtga aatacggctc ttgcaggttg aacattatcg
     6481 ccgacttccc tttcgctttt agctctttat ccagcgccgg gatctcttcc caggttttcg
     6541 gcgggttcgg gacgaggtct ttgttataaa tcagggagag ggcttcaacg gcgatggggt
     6601 aggcgatcag cttgccgtta taacgtaccg catcccaggt aaacggatag agtttgtcct
     6661 gaaacgcttt atccggagta acctccgcca gcagaccaga ctgcgcgtag ccgccaaaac
     6721 ggtcgtgcgc ccagaagata atgtcaggac cgtcgccggt ggcagccacc tgcgggaatt
     6781 tctcttccag cttatccggg tgctcaacgg tcactttaat gccggtgtct tgctcaaatt
     6841 ttttaccgac ctcggccaga ccgttatagc ccttgtcgcc gttgatccag ataaccagtt
     6901 taccttcttc aattttggcg agagccgggg cggaaatcat catcgtcgta agtgcggata
     6961 atgcgaggat gcctacgcca gttttaatct tcatatctcc catccttttt ggtgatgtac
     7021 acagaggtgg tttaacggtc tctagtttct ttatacgaca acctctttcc atcctcccta
     7081 cccctacgcc ccaccccggc tttatgtgat ctgtgttgca taaatgtgag taatgcgtgc
     7141 tggcgcacac aaaaacacgc cgatttttgc gggcggcatc acgaaattcc ttttctgtcc
     7201 gcgcccgtgg tctcaggcgt tgtgtcctca tcctcccgcc tcctccccca taaaaaagcc
     7261 ggggggtgga ggatttaccc cagtcaggga tcgcgcatag tcaggccatc atgaatgttg
     7321 ctgtcaatga caggttgtaa cgaagggaga agggcatggc gagcgtacag ctacgaaatg
     7381 taacgaaagc ctggggtgac gtggtggtat cgaaagatat taacctcgat atccatgacg
     7441 gggagttcgt ggtgtttgtc ggaccgtcag gctgtggtaa atcgaccttg ctgcgtatga
     7501 tcgccgggct tgaaactatc accagtggcg acctgtttat cggggaaacc cgtatgaatg
     7561 atattccgcc tgccgagcgc ggcgtgggca tggtattcca gtcttatgcg ctctatcccc
     7621 atctctccgt tgcagaaaac atgtctttcg gcctcaagct ggcgggcgcc aaaaaagagg
     7681 taatgaatca acgcgtcaat caggtggcgg aagtactgca actggcgcat ctgctggaac
     7741 gtaagccaaa agcgctttcc ggcggtcagc gtcagcgcgt agcgattggc cgcacgctgg
     7801 tggcggagcc gcgtgtgttt ttgctggatg aaccgctctc taacctggat gccgcgctac
     7861 gcgtgcagat gcgcattgaa atttctcgcc tgcataaacg tctgggccgc acgatgattt
     7921 acgtcaccca cgatcaggtc gaggcgatga cgctggccga caaaatcgtg gtgctggacg
     7981 ctggtcgcgt cgcgcaggtc ggtaagccgc tggagctgta ccactatccg gcggaccgct
     8041 ttgtcgcggg ctttatcggc tcgccgaaga tgaacttcct gccggtgaaa gtgaccgcca
     8101 ccgcaattga acaagtccag gtcgaactgc cgaatcgcca gcaaatctgg ctgccggtcg
     8161 aaagtcgcgg cgtgcaggtc ggcgccaata tgtctttagg cattcggccg gaacacctgc
     8221 tgccgagcga tatcgccgat gtcaccctgg aaggtgaagt ccaggtggtc gagcagttag
     8281 ggcacgaaac acaaattcat atccagatcc ccgccatccg tcaaaacctg gtttatcgcc
     8341 agaatgacgt ggtgctggta gaagagggcg ccacattcgc tatcggcctg ccgccagagc
     8401 gctgtcatct gttccgcgag gatggcagcg catgtcgtcg tctgcatcaa gagccgggtg
     8461 tttaaggcct ccataaaaaa acgaaacgca aaaccattcg cagttttaga aggtggcagc
     8521 gtttaaagaa aagcaatgat ctcaggagta tagaatgatg attactctgc gcaaactccc
     8581 tctggcggtt gctgtcgcag cgggcgtaat gtccgctcag gcaatggctg tcgatttcca
     8641 cggttacgcc cgttccggta ttggctggac gggaagcggc ggcgaacaac aatgtttcca
     8701 ggtgaccggt gcacaaagta aataccgtct cggtaacgaa tgtgaaacct atgcggaact
     8761 gaaactgggc caggaagtgt ggaaagaggg cgataagagc ttctatttcg acaccaacgt
     8821 cgcctattcg gttaaccagc agaacgactg ggaatcgacc gatcccgcct tccgcgaagc
     8881 gaacgtgcag ggtaaaaacc tgattgaatg gctgccgggc tctaccatct gggccggtaa
     8941 gcgcttctat cagcgtcatg acgtacacat gatcgacttc tactactggg atatttcagg
     9001 tcctggcgca ggtatcgaaa atatcgatct gggcttcggt aagctttcgc tggcggcgac
     9061 ccggtctact gaagcgggcg gctcttacac cttcagcagc cagaatattt atgatgaagt
     9121 aaaagatacc gctaacgacg tctttgacgt acgtctggct ggtctgcaaa cgaacccgga
     9181 cggcgtactg gagttgggcg ttgactacgg tcgcgccaat acgaccgatg gttataagct
     9241 ggctgatggg gcatcgaaag acggctggat gttcaccgcc gaacacacgc aaagcatgtt
     9301 gaaaggctat aacaagtttg tcgtgcaata tgccaccgat gccatgacca cgcagggtaa
     9361 aggccaggcg cgcggttccg acggttcttc atctttcact gaagaattgc ctgatggaac
     9421 caaaattaat tatgccaata aggtcatcaa taataatggc gatatgtggc gtattttgga
     9481 tcatggcgcc atctcgcttg gtgataaatg ggatttgatg tacgtcggta tgtaccagaa
     9541 tatcgattgg gataataacc tgggtactga gtggtggacc gtgggcgtac gtccaatgta
     9601 caagtggacg ccaatcatga gtaccctgct ggaagtcggc tacgacaacg tgaaatctca
     9661 gcagaccggc gatcgtaaca atcaatataa aatcaccctg gcgcaacagt ggcaggcggg
     9721 cgacagcatc tggtcgcgtc cggctatccg tattttcgcc acctacgcga aatgggatga
     9781 gaaatggggc tatatcaaag acggcgataa catttcccgt tatgccgcag cgactaactc
     9841 cggcatttcc accaacagcc gtggcgatag cgatgagtgg accttcggcg cccagatgga
     9901 aatctggtgg taatacgatg gtcatctgac gtaacgaggg gcgcaagccc ctctgaaaca
     9961 tcaggtctga tgatgcttgt aagccgaata aggcgccagc cgccattcgg cgatatgttt
    10021 gggttggcgc gctattgcct ggctaccgct gaacccgcct tattgaggtg agaataatga
    10081 aaatgaagaa aagtctcgtc gccctctgtt taaccgcagg gctgttcgcc agcgtgccgg
    10141 gtatcagcct ggcggaagtg aactatgtac cgcaaaatac cagtgccgcg cccgctattc
    10201 ctgctgctgc gctacagcaa ttaacctgga cgcctgtaga tcagtcaaaa acgcagtcta
    10261 cccaactggc gacgggcggc cagcgccttg acgtcgccgg cattaccggc ccggtcgccg
    10321 cttatagcgt tccggcgaat atcggcgagc tgacattaac tctgaccagc gaggtcaata
    10381 agcaagccag cgtttttgcg ccaaacgtgt tgattcttga ccaaaatatg acgccttcgg
    10441 cgttcttccc cagcagttac tttacttatc agcagccggg cgtcatgagc gcagatcggc
    10501 tggaaggcgt gatgcgcctg acgcctgcgt tggggcagca gaaactctat gttctggtgt
    10561 ttacgaccga aaaagatctt cagcaaacta ctacgctgct cgatccggca aaagcctatg
    10621 ccaaaggcgt cggtaactct atcccggata ttcccgatcc agttgctcgc cataccactg
    10681 atggcgtggt gaaactgaag gtgaaaacca acagtagctc cagcgtattg gtcgggccgt
    10741 tgtttggctc gtccggtacc gggccggtaa cggtaggcaa taccgccgcg ccggtcgctg
    10801 cgccagcgcc agtcgcgccg aagaaaagcg aaccgatgtt gaacgatacg gaaagctact
    10861 ttaataaagc gattaaggat gccgtagcga aaggcgacgt cgataaagcg ctgaaactgc
    10921 ttgatgaggc cgaacgtctg ggatcgacat ctgcccgttc cacctttatc agcagtgtaa
    10981 aaggcaaggg gtaattgttt ccccacagtg ctgattttgc agcaactggt gcgtctcctg
    11041 gcgcaccttt ttttgtcatt tcatgcgaat tgttattttt ttgttgcgca acagatcact
    11101 taattgtgat tgcgcccccc gtaatgtctt ttctgagata caatgacttt aggttatgaa
    11161 tcggagagta aggcatgtca caccctgcgt taacgcaact gcgtgcgctg cgctattttg
    11221 atgcgattcc tgcgcttgaa ccccatttgc tggactggct gttgctggaa gattctgtga
    11281 ctaaacgttt tgagcagcag ggaaagcggg taagcgtgac gctgattcgg gaagcgtttg
    11341 tcggccaaag tgaggtcgag gaagcatcag gtttactgcc atccgagtcc cgctactggt
    11401 tacgtgagat actgctttgc gctgacggcg agccctggct tgccggacgt accgtggtac
    11461 cggaatccac gctgtgcgga cctgaacagg tcttacaaca tctgggtaaa accccgcttg
    11521 gacgttatct atttacatca tcgacactga cccgcgattt tattgaaatt ggacgcgatg
    11581 caacgctgtg ggggcgccgc tctcgactgc ggttgagcgg aaaaccgctg ttgcttaccg
    11641 agcttttttt acctgcatcg ccgctgtact gagaggaaga taaagatgga gtggagtctg
    11701 acgcagagta agctgctggc gtttcaccgt ttgatgcgta cagataagcc tattggcgcg
    11761 ttgctgctgc tctggccgac gctttgggcg ctatgggtgg cgacgccggg tatgcctcag
    11821 ctgtggattt tggcagtttt tgtcgctggc gtgtggttaa tgcgcgcggc gggctgcgtg
    11881 gtgaatgatt atgccgatcg taaatttgac ggacatgtaa aacgtacggt caaccgacct
    11941 ttacccagcg gcgccgtgac agagaaagaa gcgcgcaacc tgtttgtggt gctggtgctg
    12001 ctggcgtttc tgttggtgct gacgctgaac gccatgacga ttctgctttc cgtggcggcg
    12061 ctggcgttgg cctgggttta tccctttatg aaacgctaca cccacctgcc gcaggtcgtg
    12121 ctgggggccg ctttcggctg gtcaatcccc atggcgttcg ccgcggtgag cgaatccctg
    12181 ccgttgagct gctggctgat gttcctcgcc aatattctct gggcggtggc ttacgatacg
    12241 caatatgcga tggtcgacag agatgatgat atcaagatag gcattaaatc gactgcgatc
    12301 ttgtttggtc gttatgacac attgattatc gggattctgc agcttggcgt catggcgtta
    12361 atggcgctga tcggctggtt gaatggtctg ggatggggat attactgggc tgtgctggtg
    12421 gcgggcgcgc tgtttgtcta ccagcaaaaa ctgattgcga accgtgaacg tgaagcctgc
    12481 tttaaagcct ttatgaacaa taactacgtt ggcctggtgc tatttttagg gctggcgatg
    12541 agttactggc acttctgatg tcatgccggg cgaacccggc ctacaaagcc aaaattttca
    12601 atacgtcata tcagttgccc gatgagcttg cactatcggg catttcaggc actggcttac
    12661 tcgccctgcg tcgcgctttc aatcgtcaga cggacatcag aggtaattag atcggcaagc
    12721 atctgatata tcttcatcgt ttctgccggt tcggcatcgc ccgtatcact gatataaccc
    12781 tcatcccgta gcgtcaacac gagtgaactg aacaccgctt tgtcgaaaaa ctccggcgcg
    12841 ttaataccgt gcaggacaga cagacgttgc gccacggtac ggctttcttt ctccagcgta
    12901 ctgcggttga tggacggatt ggcgctcaat agccagaacg taatggcata acgctgtagc
    12961 gtttcacgcg cgcctgccgc cagcagttgc agcgtacggg aatgcgtcgg gttgatatgc
    13021 agttcatcat cctgcagggt aattagcccc tgacgctgca tttcactggc cagcgcgtcg
    13081 atgaccgagg ctaactcctc gcgctcccag cgcaggaaca gctccgcttt taacatcgga
    13141 tagagcgctt caacatgctg ctgcaacgca tcacgcgaaa tgcgacgatg ctgggtgata
    13201 atcgccgcca tcagcgaagg cataatcaac atatgcgcga tattgttacg ataataggtc
    13261 atcaacaccg cctgctcgcg cggcaggatg atgatatcgc caatggtgtc tttctcgacc
    13321 tcaaacttat tcatctgcag cgcgtgagcg atgagctcgc cagcgctggc ggcaggaacc
    13381 gttgagtctg tggaataagg gacattgcgc atcagatcga gatagcagtc aagctgctcg
    13441 gtgagctgct cgcgggtgag cgagcgctga cgcgacgcta acagcgcggt acaacacagg
    13501 ttcatcgcgt ttgccgcgcc agcgttgtta atacgcacca tcagatcggc ggcaatacta
    13561 tttaccgtcg gcgtcagcca ggctgggcgt atggcctcta tagggtcgat agattcgcgc
    13621 cactctggca catgctggtt caggtacgtc atgagcggca tcggttcgcc aaagttaacg
    13681 tagccctgac ccagattgcg cagcttgctc aagcctttca gcatctgcgg cagactctct
    13741 ttctcttttg tcgcgccgcg cagctctttc gcataggtgc ccacttccat gacgtgctca
    13801 tagccaatgt agatcggtac gagggtaatt gggcgggtac cgccgcgtag catcgcctgg
    13861 atagtcatcg acagggtgcc ggttttcgga tctaacaaac gtccggtacg cgaacgtcct
    13921 ccttcgacaa aatactcaac cgagtaaccg cggctgaaca gctcgcccag gtattcgcga
    13981 aagacggtgg aatagagttt attcccctta aaggtgcgac gaataaagaa cgcgcccaga
    14041 cgacggaaaa ttgggccagc gggccagaaa ttaaggttaa taccggcggc aatgtgcggc
    14101 ggaaccagcc cctgatggta cagcacataa gaaaggagca agtagtccat atggctgcgg
    14161 tgacagggta catagacgat ttcatgcccg tcgtgcgcca gttggcgtac gcgctcggcg
    14221 ttatgcacgt taatcccctg gtaaagtcgg ttccaggtaa accccaaaat cctgtcggtc
    14281 aaacgaatca tctcgtaaga gaagttcgcc gcgatctctt ccatcagcgc aatggcgttt
    14341 tgctgcgctt tttcatgaga gattttctta ctgcgcgctt cgtcttctac cgcgcgggcg
    14401 atcgctttcg aggccagcag tttgttaaac agatcctgac gggcgggcag gcgtgggcca
    14461 accgccgcca ggcgctggcg agcaaagtgc atacgcgcca cgcgagccag cttctgcgcg
    14521 atgattttat cggtgccgtg ttcatcagcc atgcgacgca atgagacgga cggcgagaat
    14581 cggacaaagc tatcgcggcc cagccaggag atggcaaaga atttctgtac gccgttcagc
    14641 atacgtaaag gcgggttctc ttctcctttt tcacgacccg gcgcgcggcc aaacatcacg
    14701 gaaacgggca ccatctgcac gtccaaagct ggattactcc gatgcagatc gagataatcg
    14761 tgaaaaagtt tcaccgactc ttcttttggc gtgtaatagg taaagacacg cggtccgccg
    14821 tgaataaata catagcgtgg caacagcgcg ccgtcgatct ccagcggctc cagcggatcc
    14881 gggagatcgt gcgccagaca ttgcgcccgc agcgtcagta agtccgcttt tgagttgtat
    14941 ggcaagacat acataatggg gcgagaagta tcgagcccca attcctgggc gggttccgcc
    15001 ggaatagact tgctttttac cagtatgctt aatggtaaat tcagtaattt gtagtaaatt
    15061 cgtggccagc cggacataaa cgatgtaaag cctctggtta ataatgcaaa tgcggtgcaa
    15121 ggatatcaga aagtttagcg aatttctgtt gtatcccgtc atacttcgcg ctgcgttacg
    15181 gcagtccgaa tcgtgcaggg caaccgtata atgtcattga cgttaataat gtaaaaaggt
    15241 tcttttgatg gccaataata ccactggatt caccagaatt atcaaagcgg caggatattc
    15301 ctggaaagga tttcgcgccg catggactca cgaagcggcg tttcgccagg aaagcctcgc
    15361 ggtattgctg ggcgtcatca tcgcctgctg gctggatgtg gatgcgatta cccgtgtgtt
    15421 attgataggt tccgttttac ttatcatgat tgttgaaatc ctcaacagcg ctattgaagc
    15481 ggtcgttgac cgcatcggtt ctgaatacca tgagctttcc ggccgtgcga aagatatggg
    15541 atcggctgcg gtgctactgt ctattttcgt tgccctgatg acctggggca tcctgttatg
    15601 gtcacatttt cgataaaggt tccaaatttt ataaatctct tgttttttgc gccgtttgtg
    15661 gttccaaaat cacctttaac tgtatatact cacagcatga ctgtatatac acccaggggg
    15721 cggaatgaaa gcgttaacgg ccaggcaaca agaggtgttt gatctcatcc gggatcacat
    15781 cagccagaca ggtatgccac cgacgcgtgc ggaaatcgcg cagcgtttgg ggttccgttc
    15841 cccaaacgct gcggaagaac accttaaggc gctggcgcgc aaaggggtgc ttgaaatcgt
    15901 ttccggcgca tcgcgaggta tccgtctgtt acaggaagaa gaggacggat taccgcttgt
    15961 cgggcgtgtc gcggcgggtg aaccgcttct ggcgcagcag catattgaag gccattacca
    16021 ggtcgatcct tcactgttca aacccagcgc cgatttcctg ctgcgcgtga gcggtatgtc
    16081 gatgaaagac atcggtatta tggatgggga tttgctggcg gtacataaaa cgcaggacgt
    16141 ccgtaatggc caggtggttg tcgctcgcat tgatgatgaa gtgacagtaa aacggctgaa
    16201 aaagcagggc aataaagtgg aactgctgcc ggaaaacagc gagtttacac cgatagtggt
    16261 ggatctgcgc gaacaaagct ttacgattga agggctggcg gtaggcgtca ttcgcaacgg
    16321 ggaatggttg taatctcttt ttaatctcct tgtaagccgc catccggcaa tcgtgtagcc
    16381 tgatggcgct gcgcttatca ggcctacggg aatgcagttc ctgagatgat taatttgtag
    16441 gccggataag gcgttacgtc gccatccggc aatgcgctcg tttcgtttaa ctccttgtca
    16501 ggcttttctc catgccgctt tttacctcct ctgataaagc tctctggcgt cttgcgttgc
    16561 cgatgatttt ttctaacatc accgtcccct tactggggct ggtcgatacg gcggtgattg
    16621 gtcatctgga cagccctgtt ttcctgggcg gcgtggcggt gggcgcgact gccaccagct
    16681 ttcttttcat gctgctgcta tttctacgta tgagcaccac cggcctaacg gcgcaggcat
    16741 ttggcgccaa aaatccgcag gcgttagccc gggcgctcat tcaaccgtta ttgctggcgc
    16801 tgggcgcagg cgtgatgatt gtgctatttc gcacgccgct tatcgagctg gctttacata
    16861 ttgtcggcgg gaacgacgct gtcctggtgc aggcgagacg cttccttgaa attcgttggc
    16921 taagcgctcc cgcgtcactg gcgaatctgg tgctgctcgg ttggctgtta ggcgttcagt
    16981 atgcgcgggc gccggttatc ttgttggtcg tgggcaatat cctcaaaatc gcgctcgacc
    17041 tgtggctggt gatggggctt catatgaacg tgcagggtgc cgccctggcg acggtcatcg
    17101 cagaatatgt cacgttactg atcggcctca tgatggtacg taaagttctc catctccgcg
    17161 gtgtgtcgct ggatatgcta aaacaggcct ggcgcggcaa cgtgcgccgc cttttggcgc
    17221 tcaatcgcga tatcatgctg cgctcattgc tccttcagct ttgttttggc gcaatcacgg
    17281 tgtcaggcgc gcggctgggc agcgatatta tcgcggtaaa tgcagtcctg atgaccttac
    17341 tcacctttac ggcctatgcg ctggacggtt ttgcttatgc ggtggaggcg cactccggtc
    17401 aggcttacgg cgcgcgtgac ggtagcaagc tactggacgt ctggcgagcg gcgtgtcgtc
    17461 agtcaggaat tgtggccttg ttgttttcca cggtctatgc cctggcaggc gaacatattg
    17521 tcgcgttact aacctcattg ccgcaaatac agctactggc ggatcggtat cttatctggc
    17581 aggtggtatt accgctggtg ggcgtatggt gctatctgct cgacggtatg tttattggcg
    17641 cgacgcgcgc tgccgaaatg cgcaatagca tggctgtcgc cgcgggagga ttcgcgctga
    17701 cgctcttcgc cctgccggta ttaggaaatc atggtttatg gctggcatta accgtatttc
    17761 tggcgctacg cggtctgtcg ttgagcctta tctggcgtcg tcactggcgc gagggtacat
    17821 ggtttgccag atcgtgatgg ttaaaaattc tgaatataaa accgaaggcc gaattcctgc
    17881 ctacaattat tatcacgtcc agcagaaatt gcagtgcatt tgggcgaata acacctgcta
    17941 ttcctaaccg aatgatgagg acaagatgat gaataaagac gaagccggcg gtaactggaa
    18001 acagtttaaa ggtaaaatga aagaacaatg gggcaaactg accgatgacg atatgaccgt
    18061 tatcgaaggt aaacgcgacc aactggtagg taaaatccag gagcgttacg gttaccagaa
    18121 agatcaggcg gaaaaagagg ttgttgactg ggaaacccgt aacaactatc gctggtaata
    18181 tgttttcccc tatcaggagt acatggatgt gcttcccact gtttgcttat gaatgcgggc
    18241 gtgcccctct ctactgccgc ccgtttttcc gttcaggcta acgcggtttt ttcttcacca
    18301 gcaccgagtg atcgtgacca cagtcgcccg gatggcgaca cgcttccact tctacgcacg
    18361 cagggcacag accgtgcgcc tcaataacgt tatgtcgtag cgcaaagccc attttagccg
    18421 ccagcgtatg catgatgtct tccacgccct cggcacactc ttccttcacc acgccgcaac
    18481 gatcgcagat aaacatggcc gagctgtgcg tcggctggtc gaacaggtgg caaaccacat
    18541 aactattggt ggattccact ttatggacaa aaccctgttc gagcaaaaaa tccagcgcgc
    18601 ggtagatggt gggcggtttg gcctgtggtt ccgtttcgcg cagcaaatcg agcaaatcgt
    18661 atgcgctgat ggcaccctgt tgcagactca tcaggcgcag cacttcgagg cgctgaggcg
    18721 tcaggcgcac gttgcgctgc gcgcagagtt tttcagcttg cgccagtaac tcttgcgttg
    18781 tggtcttttc catgtagcac ctcgaatggc atgaaagtct aatccgttac tttaccacga
    18841 gctgcttaaa actctgaaat taccccgcga caatatatcg cctgctaagc ttttccgcgc
    18901 cagtattctc atctatacat aatgagggtc gatattataa caacaggatt taacatcact
    18961 atttcacagc aatagttcgc ctctgtccgg taaagcgtgg cggagggatt acttcacctg
    19021 ataataagat gggctaactg tgaacaaaaa cgtcaaactt tcactgattg ctatcgcggt
    19081 ctcgcttttt atgacaaagc aggcgggcgc cgccaatacc tggacggaag cgcgtaatga
    19141 cgcaatgggc gggacgggcg ttgcgtccgc gaattatggc agcggagtac tattaaatcc
    19201 ggcgttactg gcaaaagcca aaccggaaga caatatcact gttgtccttc ctgcggtcgg
    19261 cgtccagatt acggataaag acaatctcca ggatgaaatt gacgatatca gcgataaagt
    19321 ggattactac gatgaggtcg tcgataacct tacgctgggg caaattctgc tcaatccgcg
    19381 aggcgtgctg aatcaatttc agggcgccgc gcgcgacctg gccgatgagc tggaatatct
    19441 caacggaaaa accgcccgcg ccaatgccgg cgccgggttg gcggtaagta ttccagggca
    19501 aacgctttcc gtggcgttta tcgccaaagg ttatgcgcat gggcgcgtga gttcgtccat
    19561 tgatcagaac gatattcagt atctgcgcga tatccagcat gatgaacgtg tcgcgcttcg
    19621 tgaagcagga cgcgctgctt tgctggggtc tgacgaaatt acaaagcatt taaactctac
    19681 cgcgttgggg cgggtagcga ttgtatctga ctacggtatt gcgctggcga agcagtttgt
    19741 ggtgggcgag gtgcctgttt ccattggcgt tacgccaaaa ctgcaaaaaa cctggctcta
    19801 taactacacc acctcaattt ataactacga cagtagcgac tggaatagca gccgttatcg
    19861 caatgacgat acgggtttta acattgatgc ggggcttgct gccgatatcg gtgaaaactg
    19921 gacgttgggg ctgagcgggc aaaatctggt atctcgcgat atcgatacga aagatattta
    19981 catcactaat ggtatgacgg gagaaaccac caactacaaa gagacatacc aaatccgccc
    20041 cctggttacc gcgggcatcg catggcataa cgatttgctg accgtaagcg ccgatggcga
    20101 tctgacggaa acgaaaggct ttaagagcga agacaattca cagtacgttg gcgtcggcgc
    20161 tgaagttcga ccgttgtcat ggctggcggt gcgcgcaggg tatcgtgcgg atgtgaaaaa
    20221 taacgatagc aatgtggtta ccggcggtct tggctttgcg ccctttaacc gtgcgcatct
    20281 cgatttaatg ggactgtacg gcgaagatga aacctggggg gcaggcgcgc agcttacaat
    20341 gacattctga ggtgctttca ccggaggcgc tacgcctccg gtttagcgtt atgctatagt
    20401 aacgcccctt ttttaaccgg atgcttattt attcgccatg cagcctgaaa cccagtcctc
    20461 cgctttacct gcttatcgct tctccatcgc gcctatgctc gactggacgg acagacattg
    20521 ccgctatttc ctgcgtttgc tgtctcgcca gacgctgctc tacaccgaaa tggtgaccac
    20581 gggcgcgatt attcacggta agggtgacta tctggcttat agcgaagaag agcatccggt
    20641 cgctctacag cttggtggaa gcgatccggc tcagcttgcg cattgtgcaa agctggcgga
    20701 agcgcgtggc tacgatgaaa ttaacctcaa cgtggggtgc ccttccgatc gcgtgcaaaa
    20761 tggtatgttt ggcgcctgtt tgatgggcaa tgcgcaactg gtcgccgatt gtgttaaagc
    20821 catgcgtgat gtcgtctcga ttccggtgac ggtaaaaacc cgcattggta ttgacgatca
    20881 ggacagttat gcgttcctgt gtgatttcat taatacggtt tccggtcagg gcgaatgcga
    20941 gatgtttatt atccatgcgc gcaaagcctg gctttctggc ttaagcccga aagaaaatcg
    21001 tgagatcccg ccgctggatt acccgcgcgt ctatcagcta aagcgggatt ttccgcacct
    21061 gaccatgtcc attaacggcg gcatcaaatc gttggaagag gcgaaggaac acttgcgcca
    21121 tatggatggc gtcatggttg gccgcgaagc ttatcagaat ccgggtatac tggccgcggt
    21181 ggatcgggag atctttggcg ccgataccac cgataccgac ccggttgcgg tggttcgcgc
    21241 gatgtatccc tatattgagc gtgaattgag ccagggagcg tatctggggc atatcactcg
    21301 ccatatgctg gggttgttcc agggtatccc cggcgcgcga cagtggcgtc gctatctgag
    21361 cgaaaacgcc cataaagctg gcgcggatgc tgctgtactg gagcaggcgc taaaactgat
    21421 agcagacaag cgttaaaagt tcgccaaaaa ttagtcaatc tcaccacgct ctgcgcagtt
    21481 ttgcagggcg ttttctttat atatcaaaaa cataaatatt ggcatgattt ttgtaatagc
    21541 ttacctgacc aaacccggta agcgccgtgc cgccgggcaa tgccatcttt atggggagcg
    21601 actatgctgg aactactttt tgtgcttggc ttttttctga tgttaatggt gacgggcgtc
    21661 tccttgctgg gcattctggc cgcgctggtt gtagcgactg ccgtcatgtt cttgggcgga
    21721 atgttcgccc tgatgatcaa gctgttaccg tggctactgc tggcggtggc tgtggtgtgg
    21781 gtgatcaaag cagtaaaaac gccaaaaatc ccacagtatc agcgcaataa ccgtcggttt
    21841 tactaaggta ttgagcggtt cgtcacaacc tggaactttg ccgtcacaag caaataggaa
    21901 tcgattatta aatctgtcat gattgcgcag gtaacgaatt catcgcgctg taccctacat
    21961 acagccgaac aaaaaaagaa agggcttccc gggtggaagc ccaatttctt tgcagagcta
    22021 ttacggaatc agcaggcttg agccctgtgt ggcccggctt tccagcacct catgcgcgcg
    22081 acgggcatct tttaacgcat agcgttgatt ttcagccaca tcaactttaa tcacgccgct
    22141 ggcgatcaat gagaacaatt cattgctggc ttcggtcagt tcttcacgcg tcgtaatata
    22201 cccctgtagt gaaggtcgcg tggcatacag ggaacctttc tgattcagaa tacctaaatt
    22261 cacgccggtg acggggccgg acgcattgcc gaaactgacc atcagtcccc gacgttgcag
    22321 gcagtccagt gaggcttccc aggtatcttt ccccacggag tcatagacca cgcggacttt
    22381 tttgccgccg gtgatctctt ttacccgttc gacaatgctc tcctcacggt aattaatcac
    22441 ctgccaggcg ccggcgtcca gcgcccgctg cgctttttgc gcgctaccga cggtaccgat
    22501 aagcttcgcg cccagcgctt tcgcccattg gcaggcgatc agaccgacgc cgcccgcagc
    22561 ggcatgaaac aggaagggtt cgtcgggttt cacttcatag gttttgcgca a
//
LOCUS       DAGWFR010000059        22287 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.060, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000059 DAGWFR010000000
VERSION     DAGWFR010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 22287)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22287)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22287
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.060"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..1155)
                     /locus_tag="MOX77_002279"
     CDS             complement(<1..1155)
                     /locus_tag="MOX77_002279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tar ligand binding domain-containing protein"
                     /protein_id="HCA3357799.1"
                     /translation="MRLLQNFTIRMVMLTILGLFCLLWSGVGLYSVHALSEVSEGNDI
                     DRHLVRQMTVLSQGNDQYFRFVTRLSRAMDVKIGGGTPDFAPARQSLENMRQKLEEMK
                     ALSPGPMNPDISRAVLSNWQALLEKGVIPQMQLAQQGSLTAWSEHASTVTPALSRAFG
                     ASAERFNHEAGAMLDNTRVMVDGKTYTIRILLITAVILGIAILIFTDRYLVAMMVKPL
                     ERIRQQFQRIAQGDLSQPIEALGRNCVGRLVPLLRAMQDSLREAVSTIRAGSDNIWRG
                     ATEISTGNNDLSSRTEEQAVALEETAASMEQLTATVKMNAEHARQASQLADAASLTAG
                     KGGELVSDVVETMNGISASSQQIAEITTVINSIAFQTNILALNAAVEAARA"
     gene            complement(1462..1956)
                     /locus_tag="MOX77_002280"
     CDS             complement(1462..1956)
                     /locus_tag="MOX77_002280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00645 family protein"
                     /protein_id="HCA3357800.1"
                     /translation="MERFLENVMYASRWLLAPVYFGLSLALIALALKFFQEILHVLPN
                     VFALAEADLILVLLSLVDMTLVGGLLVMVMFSGYENFVSQLDISAGKEKLNWLGKMDA
                     TSLKNKVAASIVAISSIHLLRVFMDARNVPDNKLMWYVIIHLTFVLSAFVMGYLDRLT
                     RHNH"
     gene            complement(2027..2542)
                     /locus_tag="MOX77_002281"
     CDS             complement(2027..2542)
                     /locus_tag="MOX77_002281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA helicase"
                     /protein_id="HCA3357801.1"
                     /translation="MEPAMNSIFYSVIILLLLTGAILFLMWEVNKKRPGGKTVNLNQT
                     EPMTKEEGEDHFSVLMNSITPVWYWRVNHEYIDFLHATIKRMTMTELNETPGLFDAQR
                     RCSDLNSAVYKYYDNIKKRCLNGEKVPYSDLDVLNLRQCFREFSLEAYPALVALVWPE
                     YQRPQVKPDEI"
     gene            2634..3044
                     /locus_tag="MOX77_002282"
     CDS             2634..3044
                     /locus_tag="MOX77_002282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357802.1"
                     /translation="MLPEHLVSSHFRLSSPPPEATENSKNLSQGKTKLSDYEPDILIC
                     ANATGQHRNVLFEERDRHIKERLYCVAKIETFARLINALQAEGDIDAQTLSKILADKT
                     AMINEKGNAIWLNLITRETNMPLFYSLEDKDERS"
     gene            3031..3435
                     /locus_tag="MOX77_002283"
     CDS             3031..3435
                     /locus_tag="MOX77_002283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytoplasmic protein"
                     /protein_id="HCA3357803.1"
                     /translation="MKEVEDNNVYLALDNHKSDEFILKQNLAALIASKNATLEKVTQE
                     VVSIPAALVRLKWQNRREMYALQVKEEIYGATINAIIEQHPELRDKIMSRLESDWQHL
                     LARETATLRLTRKLSDGDYRTRNVTTVARQEK"
     gene            3559..4443
                     /locus_tag="MOX77_002284"
     CDS             3559..4443
                     /locus_tag="MOX77_002284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HCA3357804.1"
                     /translation="MSHLYDPTTQYYTGEYPKQKQPAPGVQAKMTPVPDCGEKSYVGS
                     GRLKDRKALVTGGDSGIGRAAAIAYAREGTDVAINYLPAEEEDAQQVKALIEECGRKA
                     VLLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVN
                     VFALFWITQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVA
                     EKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQE
                     SSYVTAEVHGVCGGEHLG"
     gene            complement(4556..4981)
                     /gene="exbD"
                     /locus_tag="MOX77_002285"
     CDS             complement(4556..4981)
                     /gene="exbD"
                     /locus_tag="MOX77_002285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB system transport protein ExbD"
                     /protein_id="HCA3357805.1"
                     /translation="MAMRLNENLDDNGEMHEINVTPFIDVMLVLLIIFMVAAPLATVD
                     VKVNLPASTSTPQPRPEKPVYLSVKADNTMFIGNDPVTDDTMIAELTALTEGKKDTTI
                     FFRADKTVEYETLMKVMDMLHQAGYLKIGLVGEETAKAK"
     gene            complement(4988..5722)
                     /gene="exbB"
                     /locus_tag="MOX77_002286"
     CDS             complement(4988..5722)
                     /gene="exbB"
                     /locus_tag="MOX77_002286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system-associated acyl-CoA thioesterase"
                     /protein_id="HCA3357806.1"
                     /translation="MGNNLMQTDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSK
                     SVEFFTQKRRLKREQLQLADARSLDQASDIAAGFSAKSLSAQLINEAQNELELSQGSE
                     DNEGIKERTGFRLERRVAAVGRYMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIA
                     QTQTTNLAVVAPGIAEALLATAIGLVAAIPAVVIYNIFARQIGSYKATLGDVAAQVLL
                     LQSRDLDLNASASAQPVRAAQKLRVG"
     gene            5974..7161
                     /gene="metC"
                     /locus_tag="MOX77_002287"
     CDS             5974..7161
                     /gene="metC"
                     /locus_tag="MOX77_002287"
                     /EC_number="4.4.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine beta-lyase"
                     /protein_id="HCA3357807.1"
                     /translation="MTDKQLDTKLVNAGRSKKYTLGSVNSVIQRASSLVFDTVEAKKH
                     ATRNRANGELFYGRRGTLTHFSLQEAMCELEGGAGCALFPCGAAAVANTILAFVEQGD
                     HILMTNTAYEPSQDFCSKILGKLGVTTSWFDPLIGADITQHIQPNTKVVFLESPGSIT
                     MEVHDIPTIVSAVRRVAPDAVIMIDNTWAAGVLFKALEFDIDISIQAGTKYLIGHSDA
                     MVGTAVANARCWEQLRENAYLMGQMLDADTAYMTSRGLRTLGVRLRQHQESSLKIAAW
                     LANHSQVARVNHPALPGSKGHAFWKRDFTGSSGLFSFVLNKKLTEAELSAYLDNFSLF
                     SMAYSWGGYESLIIANQPEQIAAIRPAGGVDFTGTLVRVHIGLESVDDLIADLAAGFA
                     RIV"
     gene            7301..7960
                     /locus_tag="MOX77_002288"
     CDS             7301..7960
                     /locus_tag="MOX77_002288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HCA3357808.1"
                     /translation="MAVIQDIIAALWQHDFAALANPHVVSVVYFVMFATLFLENGLLP
                     ASFLPGDSLLLLAGALIAQDVMHFLPTIGILTAAASLGCWLSYIQGRWLGNTRTVKGW
                     LAQLPAKYHQRATCMFDRHGLLALLAGRFLAFVRTLLPTMAGISGLSNRRFQFFNWLS
                     GLLWVTVVTSFGYALSMIPFVKRHEDQVMTFLMILPVALLVAGLLGTLVVVIKKKYCN
                     A"
     gene            complement(8024..8923)
                     /locus_tag="MOX77_002289"
     CDS             complement(8024..8923)
                     /locus_tag="MOX77_002289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001407451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HCA3357809.1"
                     /translation="MNREAICLQLADKINHLKNNDKIISERLAGIRLLYGVEPGPRTP
                     VMYQPGIIFLFSGHKIGYINKRKFRYDANEYLLLTVPLPFECETWATPEVPLAGIRLD
                     IDVLQLQELLMDIGEDERFQLPMAASGINSATLSDEILCAVERLLDVMEHPLDARILG
                     KQIIREILYHVLMGPRGGALLALVSRQTHFSLISRVLKQIEMKYTENLNVEQLAAEAN
                     MSVSAFHHNFKAVTSTSPLQYLKSYRLHKARMMMIHDGMKASAAAMRVGYESASQFSR
                     EFKRYFGVTPGEDAARMRTMQGS"
     gene            9116..10279
                     /gene="yqhD"
                     /locus_tag="MOX77_002290"
     CDS             9116..10279
                     /gene="yqhD"
                     /locus_tag="MOX77_002290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase"
                     /protein_id="HCA3357810.1"
                     /translation="MKNFKLHTPTRILFGKGAIVDLRDQIPQDARVLITYGGGSVKKT
                     GVLAQVQDALKGLDVREFGGIEPNPSYETLMKAVQLVRDESITFLLAVGGGSVLDGTK
                     FIAAAAQYTDGVDPWHILETGGTEIRSAIPMGSVLTLPATGSESNAGAVISRKTTGDK
                     QAFHSSFVQPVFAVLDPVYTYTLPPRQVANGVVDAFVHTVEQYVTYPVNGKIQDRFAE
                     GILLTLIEEGPKALQEPENYDVRANVMWAATQALNGLIGAGVPQDWATHMLGHELTAM
                     HGLDHAQTLAIILPALWNEKRDVKRAKLLQYAERVWNITDGSDDERIDAAIAATRRFF
                     EQMGVPTHLSDYGLDGSTIPALLAKLEAHGCTNLGENQDITLDVSRRIYEAAR"
     gene            10385..11212
                     /gene="dkgA"
                     /locus_tag="MOX77_002291"
                     /pseudo
     CDS             10385..11212
                     /gene="dkgA"
                     /locus_tag="MOX77_002291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462080.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="2,5-didehydrogluconate reductase DkgA"
     gene            11409..12863
                     /locus_tag="MOX77_002292"
     CDS             11409..12863
                     /locus_tag="MOX77_002292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000818496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DASS family sodium-coupled anion symporter"
                     /protein_id="HCA3357811.1"
                     /translation="MAEKKSQGVKWLPFILILVIAAGLWQLTPPSGLSAPAWHSAIIF
                     VATIASIVAKVLPIGAVGIIGITVFALAYAAGDKTASGAITTALSELNSSLIWLIVVA
                     FMIARGFIKTGLGRRIALQMIRLLGKRTLGLAYGLAFADLILSPAMPSNTARCGGVIY
                     PIADSLARSFDSHPEDESRSKIGTFLITCIGNVNDVTAALFMTGYTGNLLAVKLAANA
                     GVTLSWGSWFIAALLPCLVSFLIVPLLVYWLTRPEIKHTPDAPDLARKELAQMGSMAR
                     GEWLMLATVGVLLVLWIFGSSLGVDATTASFVGLSILLLSGVLTWEDVKSEKGAWDTL
                     IWFAALLMMANQLKKLGFTSWFGNLIGDSIGSTMHGTSWIIILLLLNAAYFYTHYFFA
                     SGNAQIAALYAVFLGVGLHLNIPAAPMALMLAFTSSLYCSLTQYTHARGPILFGAGYV
                     PTGIWWRTGFIISLFNQAVFLTVGLAWWKVLGLY"
     gene            12908..13363
                     /locus_tag="MOX77_002293"
     CDS             12908..13363
                     /locus_tag="MOX77_002293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HCA3357812.1"
                     /translation="MTCIFCQIVEGKAPCHKVWEDEHHLAFLSIFPNTDGFTVVIPKK
                     HYPSYAFDLPPQALADLMLATQKVAKKLDKAFPDVSRTGMFFEGFGVDHVHSKLSPMH
                     GTGDLAHWKPIESRQNKFFEQYEGYLSSHDHERADDEKLAALAARIREA"
     gene            complement(13499..15670)
                     /locus_tag="MOX77_002294"
     CDS             complement(13499..15670)
                     /locus_tag="MOX77_002294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgiQ family radical SAM protein"
                     /protein_id="HCA3357813.1"
                     /translation="MSAISLIQPDRDLFSWPQYWAACFGPAPFLPMSREEMDQLGWDS
                     CDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWNSKDDFMRLGKPNLFFG
                     VTAGNMDSMINRYTADRKLRHDDAYTPDNVAGKRPDRATLVYTQRCKEAWKDVPVILG
                     GIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRLAMGETIDQIR
                     DVRNTAIMVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKA
                     ITVQPPRPKPWEKTYILLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQKHGDRY
                     VWINPPAIPLSTEEMDSVFALPYQRVPHPAYGNARIPAYEMIRFSINIMRGCFGGCSF
                     CSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAE
                     QTCRRLSCVYPDICPHMDTDHTPTINLYRRARELKGIKKILIASGVRYDIAVEDPRYI
                     KELASHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDLYSKQAGKEQYLIPY
                     FISAHPGTRDEDMVNLALWLKRHRFRLDQVQNFYPSPLANSTTMYYTGKNPLGKIGYK
                     SEDVVVPKGDRQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGGRRECLVPAPTIE
                     EMREARRQNRNTRPALTKHTPVEHQRQGLAANKKRGKGAGR"
     gene            complement(15804..17225)
                     /locus_tag="MOX77_002295"
     CDS             complement(15804..17225)
                     /locus_tag="MOX77_002295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001528005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4459 domain-containing protein"
                     /protein_id="HCA3357814.1"
                     /translation="MKKCFLFIFMCLFIFSANAELKFRPEIENKKIYFQGKVTDYTLN
                     DFIFFGDSREPFYGSENDDYTATADEWLRFYAELPDVRKWQRVVPDDFSMMSGAPWCD
                     IQFFEQENDHSVITGSEHTRCIDFLVTPKRKGLIPMGTKGTLLDYGSYLAFAPQIEHI
                     TLEGRFPEASRTWLQVRSVQTSATSIADLKIMLNEIYARHGYIFRPGGEMDRYFRQQP
                     WYRPRYANVDYLITETEHRNIKLLKELLSPESQRKKALYIQNTTDFCEALKANNIKYV
                     MDNTAEYLTTGADQPINLEKVWQKYRDLMINGGGNCQRDIESYKRYSFLYSEPLGIYY
                     NSTFEFDEKKGKYVLAYVNFDSSCNKEGDTIELEGMMVKREHVIEDNQGQHSDKDLEL
                     KTINLQCVAGAMMDQPDWDRYVQLILPPEKYNYYQRFIGKKITLRGKVMIAESMYHVT
                     PVLLNLLEEQNPIIKVADMPARP"
     gene            complement(17290..18714)
                     /locus_tag="MOX77_002296"
     CDS             complement(17290..18714)
                     /locus_tag="MOX77_002296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000384560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357815.1"
                     /translation="MDYINRWLGSELLMFCVLPWGYAAAVASLLILMFSKKRSRQILL
                     WVLLPQWAFVVLLLPTLQYTQLLSQTGTVWMLMLLLPILSWAGLLPALLLGTWLRKPW
                     PAWLLCHIVFIGMLCPVMPELWRAISYQWQQQNIAQLLRQVQAGDLRQLESIHDNSTL
                     EQTLVQAVKAPGISEKNLRDLTARVASPFRFSREDGYFVNAPFFAAFESGNITAVRIF
                     SEQLMGDSPQAQANRTIVRRQNPLEYLPTPRFKPEGFRQTFFEMADILLRVMPDLLTD
                     EAYSGAIQLQDKETLAFFWQRREAQNPLYRAYYFLLQGQTKALLAQIKLTPQVLGQSV
                     YPNKNLLASLFIDADGETLRALVKGQMLNWQHIPQDKLTDGWNFLISRTLHTASKEDA
                     LPPDILAGILQSMQQQHTALSEALIVASLDYQDERHSLMTAYRMAWLDCNKLNAMIDK
                     VYPPEDTRRTNVRIKLAQQCADLD"
     gene            complement(18730..19689)
                     /locus_tag="MOX77_002297"
     CDS             complement(18730..19689)
                     /locus_tag="MOX77_002297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001765108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357816.1"
                     /translation="MASVLTLAAEHRDTPENLLRYLAKIRGISPFLTAAESCPEAAIP
                     NAEFLYTPFATALRQHNVPIVRFFSQQLVGETSSARENRNIVARKENPLLTLYKSNYI
                     SQYREQYRLEISQLLLNIMPELLNDTVYIYPIIQRNTELVAYFWQKHPPTIPLRRLEA
                     MVLLAKTESLISEVTHNPEILITPPIERWDRENLLTFILSNGDLVMIQSLIDANVVDW
                     KRAMEDGNNEPLHQAILRLRGGALENALLIQIIKAMQAQKALSNEQIAHYLPWTPTFP
                     AAFLQAGLSCEQLREVLNALVVGSEQVLHDTRQRLNALCPVAK"
     gene            complement(19768..20151)
                     /locus_tag="MOX77_002298"
     CDS             complement(19768..20151)
                     /locus_tag="MOX77_002298"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357817.1"
                     /translation="MGESFAWMMWDSVILMSAWGIYGVVLLRLIVGAFDSLRYRRVFL
                     RVVLPQVSVVCVVWGGLFWIDSKDIYIVYLLISGLLPSIIIAIFSSRESPFFILGTIV
                     SHTIFLFVFVYVMDGPRLWHHIGED"
     gene            complement(20335..20946)
                     /locus_tag="MOX77_002299"
     CDS             complement(20335..20946)
                     /locus_tag="MOX77_002299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000261098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357818.1"
                     /translation="MVVLLLLLAHMGDILDRHHRRDAYQAQQVAEETLLRKIDTTDDR
                     VFLNHLMSQAMQPQNAGDWGTNRRIEHLAKRISPFDIAGGTEKIWLVLAIDRLNRSAV
                     GTFASWFIGDSVQAKQYRHQLLQNNPLLDLLNRVFNDSTADEQTFLQQQLLARDICTS
                     LISVVPELLTDELYAQAVAFDNSNKPEPFSWQFEFDVFYHQKK"
     gene            complement(21100..21246)
                     /locus_tag="MOX77_002300"
     CDS             complement(21100..21246)
                     /locus_tag="MOX77_002300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001222143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357819.1"
                     /translation="MRINEEGWRLLTFWMFTTGGYLILLFVVICLAFLFQTPRRVLLW
                     IALP"
     gene            complement(21267..>22287)
                     /gene="ftsP"
                     /locus_tag="MOX77_002301"
     CDS             complement(21267..>22287)
                     /gene="ftsP"
                     /locus_tag="MOX77_002301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cell division protein FtsP"
                     /protein_id="HCA3357820.1"
                     /translation="IRQSAATLWYHANTPNRTAQQVYNGLAGMWLVEDDISKTLPIPN
                     HYGVDDFPVIIQDKRLDNFGTPEYSEPGSGGFVGDTLLVNGAQSPYVEVSRGWVRLRL
                     LNASNSRRYQLQMSDGRALHVISGDQGFLPAPVSVKQLSLAPDERREILVDMTNGDEV
                     SITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLVTDNLPMRLLPTEIMSGA
                     PVRSRDISLGDDPGINGQLWDVNRIDITAQQGTWERWTVRADMPQSFHIEGVSFLIRN
                     VNGAMPFPEDRGWKDTVWVDGQVELLVYYGQPSWPHFPFYFNSQTLEMADRGSIGQML
                     VNPAS"
BASE COUNT         5535 a         5921 c         5470 g         5361 t
ORIGIN      
        1 cgctctggcc gcttctaccg ctgcgttcaa ggccagaata ttggtctgga aagcaatact
       61 attaatcacg gtagtaattt cggcgatctg ctgcgaactg gcggaaatac cgttcattgt
      121 ttctaccaca tcggaaacca gttcaccgcc ttttcctgcc gttagcgagg cggcatccgc
      181 aagctgactc gcctggcgag cgtgttcggc gttcattttt accgttgcgg taagctgttc
      241 catgctggcg gcagtttctt ccagcgcgac ggcctgttct tccgttcggg aagagagatc
      301 gttattaccg gtagaaattt ccgtcgcgcc gcgccagata ttgtcgcttc cggcgcggat
      361 cgtactgacg gcttcgcgta aactgtcctg catcgcgcgc agtagcggca ccaaccggcc
      421 tacgcagtta cgccccaacg cttcaatcgg ctggctaaga tcgccttgcg cgatacgctg
      481 aaactgctga cggatgcgct ccagcggttt caccatcatt gcaaccaaat agcgatcggt
      541 aaaaatcagg atggcaatgc ccagaatcac cgccgtaata agcaggatgc ggatggtata
      601 ggttttacca tcgaccatca cacgggtgtt atccagcatg gcgccagctt catgattaaa
      661 ccgttccgcg ctggcgccga acgcgcggct aagtgcaggc gtgaccgtac tggcatgttc
      721 gctccaggcg gtcagcgatc cttgctgcgc cagttgcatt tgaggaatga cgcctttctc
      781 cagcaaggcc tgccagttgg acaacaccgc ccttgagata tcagggttca tcggccctgg
      841 cgatagcgct ttcatctcct ccagcttctg acgcatattc tcgagcgact gccgggcggg
      901 cgcaaaatcg ggcgtgccgc cgccgatttt tacatccatc gcgcggctaa ggcgggtaac
      961 aaagcggaaa tattgatcgt taccctggct tagcaccgtc atttgccgca caagatgccg
     1021 gtcaatatca tttccttccg aaacttcgga taaagcatgg acgctgtata aacccacccc
     1081 cgaccagagt agacaaaaaa gtcccagtat cgtcagcatg accatacgaa tagtaaagtt
     1141 ttgcagcaaa cgcatatgaa tttccttgct gaatataaga gattagtcat cagacgatga
     1201 cgcactctcg ttatcggcaa ggcgcggaga atatataatg cattctccat ttttttacag
     1261 ttatcgccgt ttacgtaccc gtagatgtta tatatctgtg aacgcagaga aaatctttca
     1321 gtgttattac tgagtaaatg aatagatgta gtaaaaatat tgcgtaaggc tgcagggaga
     1381 cggttatcca ccgttaaaga agcgctgttt tacagccggg ctcagcgtcc tttgcccgac
     1441 tgccccgccg tggacggcgg ctcaatggtt atgtcgcgtc aatctgtcca gatagcccat
     1501 cacgaacgcc gacaggacaa aggtcagatg gatgatgaca taccacatta atttgttatc
     1561 cgggacgttt ctcgcatcca taaacacgcg taacaggtga atggaagaga tagcaactat
     1621 cgatgccgcc accttatttt ttagcgacgt cgcatccatt ttccccagcc agttcagctt
     1681 ctccttgccc gcagagatat ccagctgaga gacaaagttt tcatacccgg agaacatgac
     1741 cattaccagc aacccgccga ccagcgtcat atcaaccagc gataacagca ccaggatcag
     1801 atcggcctcc gccagggcaa aaacgttcgg cagaacgtgt agaatttcct ggaaaaattt
     1861 tagcgctaaa gcgatcagcg ccaaagagag gccaaaatac accggcgcga gcagccagcg
     1921 agacgcatac attacatttt caagaaagcg ttccataggg acctgtcagg taactaaaac
     1981 cagcaacagt atatctcaac catacaacat cagatcaaca tgtcagttaa atctcatccg
     2041 gtttaacctg tgggcgctga tattccggcc ataccagcgc gaccaacgcc gggtaggctt
     2101 caagactgaa ctcacgaaaa cactggcgta aattaaggac gtccaaatcc gaatacggca
     2161 ccttttctcc gttcagacaa cgcttcttta tattgtcgta atacttataa acggcagagt
     2221 taaggtcgct gcaacgacgc tgtgcgtcaa ataatccagg cgtttcattc aactcagtca
     2281 ttgtcattcg ttttatcgtt gcatgaagga aatcgatata ttcatggtta acgcgccagt
     2341 accataccgg cgttatcgaa ttcattaata ctgagaaatg atcttcgccc tcttcctttg
     2401 tcatgggttc agtttgattt aaatttacgg tttttccacc aggacgtttt ttattaacct
     2461 cccacatcag gaagagtatc gcgccggtca gtaatagcaa tataataaca gaataaaaaa
     2521 tactgttcat agcaggctcc attttttttg attttaaaat tacaccatgt tattgtcaac
     2581 gaaacctaca ctattaaaaa tagtatacca ctgatcgtaa aggatattta gtcatgcttc
     2641 ctgagcatct ggtttcctct cattttcgcc tgtcatcgcc gccccctgaa gccacagaaa
     2701 acagtaaaaa tttgtctcag ggaaagacaa aactcagcga ttacgagccc gatattttaa
     2761 tttgcgctaa cgcaaccggg caacacagaa acgtattatt tgaagaacgc gaccgtcata
     2821 ttaaagaacg tctgtattgt gtggctaaaa ttgaaacgtt tgcccgcctg ataaacgcac
     2881 tacaggcaga aggcgatatt gatgcccaaa cgctaagtaa aatactggcg gataaaaccg
     2941 caatgataaa tgaaaaaggt aatgccattt ggcttaattt aatcactcgc gaaaccaata
     3001 tgccgctatt ttattcactg gaagataaag atgaaagaag ttgaagacaa taacgtttat
     3061 ttggctttag acaaccataa aagtgatgaa tttatcttaa agcaaaatct tgcagcgcta
     3121 atcgccagta aaaatgccac tctggaaaag gtaacgcagg aagtggtatc cataccggcg
     3181 gcgttagtgc gcctgaagtg gcaaaaccga cgagagatgt atgcgttaca ggtcaaagag
     3241 gagatttatg gcgcgaccat caatgctatt atcgagcagc atcctgaatt acgagacaaa
     3301 attatgtctc gtcttgaaag tgactggcag catctgctgg ctcgcgagac ggcaacctta
     3361 cgtctgacgc gtaagctttc cgatggcgac taccggacgc gcaacgtcac cacagtcgca
     3421 cggcaagaaa aataaccttc atagctagtt aactctgttg tgaatacggg cgaagcataa
     3481 ggatcgttct gattctccct cttacggtag taaaagtgtc tacgcttaaa gggtgttcaa
     3541 cctgaaggga gaagctcaat gtctcatcta tacgacccta ccacgcagta ttacaccggc
     3601 gagtatccta agcaaaaaca gccggcgccc ggcgtccagg cgaaaatgac gcctgttcct
     3661 gactgtggtg aaaaaagtta tgtcggcagt ggtcgcctta aagatcgtaa ggcgctggtg
     3721 acagggggcg actccgggat tgggcgcgct gccgctatcg cttacgcgcg tgaaggcaca
     3781 gatgtcgcga tcaactatct gccagcggaa gaagaggacg cccagcaggt taaagcgctg
     3841 attgaggagt gcggccgtaa agcggtgtta ttgccgggcg atcttagcga cgaatctttc
     3901 gcccgttcgc tggtccataa ggcgcgcgaa gcgctgggcg ggctggacat tctggcgctg
     3961 gtagccggta aacagacggc aatcccggag ataaaagatc taaccagcga gcaatttcag
     4021 caaaccttcg ccgttaacgt ttttgccctg ttctggataa cccaggaagc gattccgctg
     4081 ctgccaaaag gcgccagtat tatcacaacg tcgtctatcc aggcctatca gcccagtccg
     4141 cacctgctgg attatgcggc aaccaaggcg gcaatcctta attacagccg cggcctggcg
     4201 aaacaggtgg cggaaaaagg aattcgcgtg aatattgtcg cgcctggccc tatctggaca
     4261 gcgctgcaaa tttccggcgg ccaaacacag gataaaattc cgcagtttgg ccagcagacg
     4321 ccaatgaagc gggccggtca accggcagag ctggcgccgg tgtatgtcta tctggcaagc
     4381 caggaatcaa gttacgttac cgcagaagtg cacggcgtgt gcggcgggga acatttaggc
     4441 taacgcatga agtcgattaa ggtggcgcaa ttctgttaag caaggcgcca tcttaggcaa
     4501 taaaaaagcc gggtggcgac ttcgccttac ccggcctaca gcatcagcag aatacttatt
     4561 tcgctttcgc ggtctcttcg ccgaccaaac caatcttgag atagcccgcc tgatgcagca
     4621 tatccatcac tttcatcagg gtttcatact ctacggtttt atccgcacgg aagaaaatcg
     4681 tagtatcctt tttcccttcc gtcagggccg ttagctcggc aatcatcgta tcatccgtca
     4741 ccggatcgtt accgataaac atggtgttat ccgctttcac cgacagataa accggttttt
     4801 ccggacgcgg ctgtggcgta ctggtagaag cgggcagatt caccttgacg tccaccgtcg
     4861 ccagcggcgc agccaccata aagataatca gcagaaccaa catgacatcg ataaacggcg
     4921 tcacgttgat ttcatgcatt tcgccgttgt catccaggtt ctcgttaaga cgcattgcca
     4981 tgacgcatta ccctacccgt aatttctgcg cggcgcgtac cggctgcgca ctggcgctcg
     5041 cattcagatc aagatcgcgg ctttgcagca gcaatacctg cgccgccacg tcgcccagcg
     5101 tcgctttgta actgcctatc tgacgtgcga agatgttgta aatgacgacc gccgggatcg
     5161 cggctaccag cccaatcgcc gtcgccagca gcgcttccgc aataccagga gcgaccaccg
     5221 ccaggttggt ggtctgcgtt tgcgcaatac cgatgaagct attcataatg ccccatacgg
     5281 tgccaaacaa cccgacgaag ggggaaatgg cgccgatcgt cgccagataa ccgttgcctc
     5341 gtcccatgta gcggccaacc gctgcgacgc gacgttccag acggaagccg gtacgttctt
     5401 taatcccttc gttatcttcg ctgccctgag agagttccag ttcattctgc gcttcattga
     5461 tgagctgtgc gctgaggctt tttgcgctga aacctgccgc aatgtcggaa gcctgatcta
     5521 aagagcgcgc atcggctaat tgcagttgtt cgcgctttaa gcggcgcttt tgcgtgaaaa
     5581 attcaacgct tttactgaag aagatagccc aggtgacgac tgacgccaga atcaaaccaa
     5641 tcatcacgca cttcacgaca atatcggcgt gctgatacat gccccagacg gaaagatccg
     5701 tctgcatcaa attattaccc actctgtatc tccaggacgc aaatcacaaa atctgagcat
     5761 aataatatca aaacaacgtc gaattgatag tcgttctcat tactatttac atactgccgc
     5821 acctttactg ctttttcttt gcgcttacgc attaaaaaag ccacctgttt ttattttggc
     5881 aaaattttca tctgtatcac acatcgccag ggtgcagatg gttatattca tgctagttta
     5941 gacatccaga cggttaaaat caggaaacgc aacatgacgg ataaacagtt ggataccaaa
     6001 ctggtaaacg caggacgcag caaaaaatac acgcttggct cagtgaatag tgtgattcaa
     6061 cgcgcttctt cactggtgtt tgacaccgtc gaggccaaaa aacacgctac ccgcaatcgc
     6121 gccaacggcg aattatttta cggacgccgg ggaacgctga ctcacttttc gctccaggaa
     6181 gccatgtgtg aactggaagg cggcgccgga tgcgcgctct tcccgtgcgg tgcggcggcg
     6241 gtcgccaaca ccattctggc attcgttgaa cagggcgacc acatcctgat gaccaacaca
     6301 gcctatgaac ccagccagga tttctgcagc aaaattctcg gcaaactggg cgtgacgaca
     6361 agctggttcg acccgctcat cggcgctgat atcacgcaac atattcagcc gaacacgaaa
     6421 gtcgtatttc tggaatcccc cggttctatt accatggaag tacatgatat tccgaccatt
     6481 gttagtgcgg tcagacgcgt cgcgccagac gccgtcatca tgattgataa tacctgggcg
     6541 gctggcgttc tgttcaaagc tctggaattc gatattgata tctctatcca ggcgggcact
     6601 aagtatctaa ttggtcattc tgatgcgatg gtcggtactg ccgttgcaaa tgcgcgctgc
     6661 tgggaacaat tgcgggaaaa cgcctatctg atggggcaaa tgctcgacgc cgacacggct
     6721 tatatgacca gccgcggtct gcgcacgctc ggcgtccgac tgcgccagca tcaagaaagc
     6781 agcctcaaaa tcgccgcgtg gctggcgaac cattctcagg tcgcgcgcgt taatcatccg
     6841 gccctgccgg gtagcaaagg tcatgcgttc tggaaacgag actttacagg cagcagcggc
     6901 ctgttctcct ttgtgctcaa taaaaagctg accgaggcag aattatcagc ctatctggat
     6961 aacttttcgc tgttcagtat ggcctactcc tggggaggct acgaatcgct gattattgct
     7021 aatcagccgg aacagatcgc cgcgattcgt cccgcaggcg gcgtagattt taccggtacg
     7081 ctggttcgag tgcatattgg tttagagagt gttgatgatt tgatcgctga tttagccgcc
     7141 ggcttcgcca gaattgtgta aagttgccgt ggatggacat atatgcagac aatttccgtg
     7201 gaaaagtctg cgtttgttgc gtccgggatc aaggcatccc ggacgattca ggagtacaat
     7261 aggcagataa aagcgtaaat gctgttccac aggaaagttc atggctgtca ttcaagatat
     7321 tatcgctgcg ctctggcaac atgattttgc cgcgctggcg aatccacacg ttgttagcgt
     7381 cgtctacttt gtcatgttcg ccacgctatt tttagaaaac ggtctgctgc cagcgtcatt
     7441 cttacccggc gatagtctgc tgctactggc aggcgcgttg atcgcccagg atgtgatgca
     7501 ttttttgccg acgattggca ttctcaccgc cgcggccagt ctcggctgct ggctaagtta
     7561 tatccaggga cgctggctcg gtaatacgcg taccgtcaaa ggctggctag cgcagcttcc
     7621 ggcaaaatat catcagcgcg ccacctgcat gtttgaccgt cacggtttgt tagcgttgct
     7681 tgccgggcgc tttctggcgt ttgtccgcac gctgctgcca acaatggcgg gcatttccgg
     7741 cctgtccaac cgccggtttc agttttttaa ctggttaagc ggcctgctgt gggtgactgt
     7801 cgtgaccagc ttcggctacg cgctcagtat gatcccgttt gttaagcgcc atgaagacca
     7861 ggtaatgaca tttttaatga tccttcccgt cgcgctactg gtcgccgggc tgttaggtac
     7921 gctggtcgtg gtgattaaaa agaaatactg taacgcctga cgtatccata atcggccagg
     7981 atggcccggt tacgcttcgt tgccccgtgg cgggatgccc cacttagctc ccttgcattg
     8041 tccgcattct tgccgcatct tcgcccggcg taacgccaaa ataacgttta aactcccggc
     8101 taaactgcga tgcgctctca tagccgaccc gcatcgccgc ggcgctggcc ttcataccgt
     8161 cgtgaatcat catcatccgc gctttatgca gtcggtagct ttttaaatac tgcaacggcg
     8221 aggtgctggt gaccgcctta aaattatggt gaaacgccga cacgctcatg ttcgcttctg
     8281 ccgccagttg ctcaacattc aggttctcgg tgtatttcat ttcgatctgt ttaagtacgc
     8341 gactgatcag gctaaagtgc gtctggcgac taaccagcgc aagcagcgcc ccgccgcgcg
     8401 gccccatcag cacatgataa agaatttcgc gaataatctg ttttcccaga atccgcgcat
     8461 ccagcgggtg ctccatcaca tccaacaatc tttccaccgc gcataaaatc tcgtccgaca
     8521 gcgtggcgga gttaatcccg ctggccgcca tcggcaactg gaaacgctca tcttcgccaa
     8581 tgtccatgag caactcttgc agttgcagca catcaatgtc gagccgaata ccggccagcg
     8641 gtacctccgg cgtcgcccag gtctcgcatt caaaagggag cggcacggtc agtaagagat
     8701 attcattagc gtcataacga aacttgcgct tgttaatata gccaatttta tggccggaaa
     8761 agagaaatat gatgccaggc tgatacatga ccggcgtgcg cggccccggt tcaacaccat
     8821 acaacagacg aatgcccgcc agccgctcgc tgattatttt atcattattt tttaaatgat
     8881 taattttatc agccaactgt aagcaaattg cttcacgatt cataacgcgc cattttttta
     8941 tcaaatccac tccgctggat tgtgcgcatt tttagcgatt ttctccagca ttctggagaa
     9001 ataggcaaaa cattggcaga aatgtgcatt gagagacatc tctcacaaga ccacaatgat
     9061 gaccatcagg cagacagccg cctgccctct ttttacccac ataagggaat gagcaatgaa
     9121 aaatttcaaa ttacataccc ctacccgcat tctgtttggt aaaggcgcta tcgtcgatct
     9181 ccgcgatcag atcccgcagg acgcccgcgt gctgattacc tatggcggcg gtagcgtgaa
     9241 aaagaccggc gtactggcgc aagttcagga cgcgttaaaa ggactggatg ttcgggagtt
     9301 tggcggtatt gaaccgaacc cgtcctatga aacgctgatg aaggccgtgc agcttgtgcg
     9361 cgacgaaagt attaccttcc tgctggccgt tggcggcggt tccgtactgg acggcaccaa
     9421 atttatcgcc gcagcggcgc agtatacgga cggcgtcgat ccgtggcaca ttctggaaac
     9481 cggcggtact gagattcgta gcgcaatccc gatggggtct gtgctgaccc taccggcaac
     9541 cggctcagaa tcgaacgccg gcgcagtcat ttcccgtaaa actactggcg acaaacaggc
     9601 cttccactcc tcgttcgtgc aaccggtgtt tgccgtactg gacccggtct acacctatac
     9661 attgccgccg cgccaggttg cgaacggcgt cgtggatgct ttcgtccata ccgttgagca
     9721 gtacgtcact taccccgtta acggcaaaat tcaggatcgt ttcgccgaag gtattttact
     9781 cacactgatc gaagaaggtc ccaaagcgct gcaagagcct gaaaactatg acgtccgcgc
     9841 taacgtgatg tgggccgcta ctcaggcatt gaatggcctg attggcgctg gtgttccgca
     9901 agactgggcg acgcatatgc tgggccatga gcttacggcg atgcacggtc tcgatcatgc
     9961 ccagacgctg gctatcattc tgcctgcgct atggaacgaa aaacgagacg ttaaacgcgc
    10021 aaaactcctg caatacgctg aacgtgtatg gaatatcacc gacggttccg acgacgagcg
    10081 tattgatgcc gccattgccg ccacccgccg tttcttcgaa cagatgggcg tgcctaccca
    10141 cctgtccgat tacggtctgg atggcagcac tattccggcg ctactggcca aacttgaggc
    10201 gcatggatgc acaaatttag gtgaaaatca ggatattacg ctggatgtca gccgtcggat
    10261 ttatgaagcg gcgcgctaag gttttttcgc ctctgacttt cgtttttggc catttcgtcc
    10321 agacttaagt cacttagtct cgccggaccc gactccggcg agccaattaa aagaggaaca
    10381 catcatggct aatccaacca ttatcaggct acaggatggc aacgtaatgc cacaacttgg
    10441 gctgggagtc tggaaagcaa gcaatgaaga ggtgatcgcg gcgattcata aagcgctgga
    10501 ggtgggctat cgatcgattg ataccgccac agcatatcag aatgaagaag gcgtcggcaa
    10561 agcgctaaaa gcagcgagcg tggcgcggga agagctgttt atcaccacta agttgtggaa
    10621 tgacgatcaa aaacgtcccc gcgaagccct gcaggagagt ctgaaaaaac tgcaacttga
    10681 ttatctcgat ctctatctga tgcactggcc cgtaccggct atcgatcact atgtcgacgc
    10741 ctggaagggc atgatcgcgc tgcaaaaaga ggggctggta aagagtatcg gggtctgtaa
    10801 ctttcagatc catcacctcc agcgtctgat cgatgaaacc ggcgttcccc ctgtgatcaa
    10861 ccagatcgag cttcacccct tgatgcaaca gcgccagcta catgcgtaga atgcgacgca
    10921 taaaatccag accgagtcct ggagcccgct ggcgcagggc ggcgaaggcg tattcgatca
    10981 gaaagtgatt cgcgaactgg cggataaata cggcaaaacg cccgcccaga ttgttattcg
    11041 ctggcatctg gactgcgggc tggtagtcat tccgaaatcc gtcactcctt cccgtatcgc
    11101 ggaaaacttt gctgtctggg atttccgtct cgataaagat gaattaggcg agatcgcaaa
    11161 actggatcaa ggaaaacgcc tcgggcccga tccggatcag tccggcggtt aagccggatt
    11221 tatcgcacgc catgcccgac gatgtcgtcg ggcttttttg cattccgaaa cattaagaaa
    11281 caattacgcg catttaacag tatatttccc ccacacacaa gcgcagaatt attctgattt
    11341 tgtgaatatt tattcgcatt tattatgaat ttacttaata catataaaat atttatggat
    11401 gtgtgattgt ggcggaaaaa aaatctcagg gcgtcaaatg gctcccattc attcttattc
    11461 tggttatcgc cgccggactg tggcagctaa cgcccccttc cgggttaagc gcgccggcct
    11521 ggcattccgc gattattttt gtcgcgacga tcgcctctat cgtggcgaaa gtgctgccta
    11581 ttggcgcggt cggtattatc ggcatcaccg tctttgcgct cgcctatgct gccggcgaca
    11641 aaacggccag cggcgcgatt accacggcct tgagcgagct gaacagttcg ctgatctggc
    11701 ttatcgtcgt cgcctttatg attgcccgtg ggtttatcaa aaccgggctg ggtcggcgta
    11761 tcgccctaca aatgatccgt ctgttaggta aacgaacgct gggtctggct tatggcctgg
    11821 cgtttgccga tctgatcctc tcccccgcga tgcccagtaa caccgcgcgc tgcggcggcg
    11881 tgatttaccc gatcgccgac tcgctggcgc gcagctttga ttcacatccg gaagatgagt
    11941 ctcgcagcaa aatcggcacc tttctgatca cctgtattgg caatgttaac gacgtcaccg
    12001 ccgcactgtt tatgaccggt tatacgggta acctgctggc ggtaaaactg gcggcgaacg
    12061 ccggcgttac gttgagctgg ggaagctggt ttattgccgc gctcttgcct tgcctggtct
    12121 cttttcttat cgtcccgctg ctggtctact ggctgacgcg tccggaaatt aaacatacgc
    12181 cggatgcgcc ggatctggcg cgcaaagagc tggcgcaaat gggcagtatg gcgcgcggcg
    12241 agtggctcat gctggcgacc gtcggtgtgt tgctggtgct atggattttt ggcagctcgc
    12301 tcggcgtgga tgccacgacg gcctcttttg tcggtctctc tattttatta ctgagcggcg
    12361 tgctcacctg ggaagacgtt aaaagcgaaa aaggcgcctg ggatacgttg atttggtttg
    12421 ccgcgctgct gatgatggct aaccagttga aaaaactagg attcaccagt tggtttggca
    12481 acctgattgg cgacagcatc ggcagtacga tgcatggaac cagttggata atcatcctgc
    12541 tgctgcttaa cgcagcctat ttttataccc actatttttt cgccagcggc aacgcgcaaa
    12601 tcgccgcgct gtatgcggtg tttctgggtg tcggcctgca tctgaatata ccggcggcgc
    12661 cgatggcgct catgctggcg tttaccagca gcctgtactg ctctcttaca cagtataccc
    12721 acgcacgcgg ccccattctt tttggcgccg gctatgtacc gacgggcatc tggtggcgaa
    12781 cgggatttat tatcagcctc tttaaccagg cggtcttttt gacagtcggc ctcgcatggt
    12841 ggaaagtgtt agggttgtat taaacgctta acgcatcgat aaccccctcg gttaacggag
    12901 aaatggaatg acctgcattt tctgtcaaat agttgaaggt aaagcacctt gtcataaagt
    12961 ttgggaagat gagcatcacc tggctttttt gtcgattttt ccgaataccg atgggtttac
    13021 cgtagtgatc ccgaaaaaac attaccccag ctacgcgttc gatctaccgc cgcaggcgtt
    13081 agcggacctg atgctggcga cccaaaaagt ggcgaagaaa ctggataagg ctttcccgga
    13141 tgtcagtcgt acgggaatgt tcttcgaagg tttcggcgta gaccatgtgc atagtaaatt
    13201 aagccccatg cacggtactg gcgatttagc ccactggaaa ccgattgaat cgcggcagaa
    13261 taaatttttc gaacagtatg aaggatacct gtcgtcacac gatcatgaac gggcagatga
    13321 tgagaaactg gccgcgctgg cggccagaat tcgtgaggca taaatacgga gcacttctgc
    13381 cggatggtgt tcggcctggg tcgatctgtg ggcctgataa acgcagcgcc atcaggcaaa
    13441 ataattgctg gatcgcggct tcgccttatc cagcctgaca ggatacctgt aaaaccgttt
    13501 aacgccccgc gcctttcccg cgcttcttat tagcagcaag cccctgccgc tgatgttcca
    13561 ccggcgtatg cttggtcaac gccgggcggg tattgcggtt ctggcgacgc gcttcgcgca
    13621 tctcttcaat ggtcggcgca ggcaccagac actcacggcg accgccaatc aggtgctttt
    13681 tgcccatcgc ttccagcgcc tggcgaatca gcggccagtt cgccggatcg tgataacgca
    13741 gcagcgcctt atgcaggcga cgttgcctgt ctcccttcgg caccaccaca tcttcactct
    13801 tataaccaat tttacccagc gggtttttgc cggtgtaata catggtggtc gaatttgcca
    13861 acggcgacgg gtagaagttc tgcacctgat ccagacggaa gcggtggcgc ttgagccaca
    13921 gcgccagatt caccatatcc tcgtcccgcg tgcccggatg cgcggagata aaatatggga
    13981 tcagatactg ctcttttccg gcctgtttag agtaaaggtc aaataactct ttaaagcgat
    14041 cgtagctgcc catacccggc ttcatcattt tcgacagcgg accttcttca gtatgctccg
    14101 gcgcaatctt cagatagccg cccacatgat ggcttgccag ctctttaatg tagcgaggat
    14161 cttctacagc gatgtcgtag cgcacgccgg aggcaattaa gattttctta atgcctttca
    14221 gctcacgggc gcggcgataa agattgatcg tcggcgtatg gtcagtatcc atatgcggac
    14281 agatatccgg atagacgcat gacaggcgac gacaggtctg ctccgcacgc ggcgacttac
    14341 agcgcagcat atacatgttc gcggtaggac cgcccagatc ggagatcacg ccggtaaacc
    14401 ccggcaccgt gtcgcggatc gcttcgatct cgttgataat agagtcttcc gagcggctct
    14461 gaatgatgcg cccttcatgt tcagtgatcg agcagaaaga gcagccgcca aagcagccgc
    14521 gcatgatatt gatcgaaaag cggatcatct cataggccgg aatacgggca ttgccgtaag
    14581 ccgggtgcgg cacacgctga tacggcagcg caaacacgct atccatctct tcagtggaga
    14641 gcggtatggc gggcgggttg atccagacat agcggtcgcc gtgtttttgc atcaacgccc
    14701 gcgcgcagcc agggttagtt tcgtgatgca gaatacgcga cgcatgggcg tacagcacct
    14761 tgtcgccttt caccttttca aaggatggca acaggatata ggttttttcc cacggcttcg
    14821 gacgcggcgg ctgcacggta atcgccttag cttcttgctt tttcggcgcg accggcttgt
    14881 tatccgcgca cggcagatcc tcgccatagg gatggggaat tggatcgatt ttacccggcg
    14941 tgtccagacg agtggagtcg acgccgctcc agcctggcag cgcttcttta accataatcg
    15001 cagtgttacg cacgtcgcga atctgatcga tggtttcgcc cattgccaga cggtgcgcca
    15061 cttccaccag cggacgctca ccgttgccaa acatcagcat gtcggctttg gaatcgacta
    15121 acactgaacg acgcacagta tcagaccagt agtcgtaatg cgcggtacgg cgcagactgg
    15181 cctcaatgcc gccaaggatc accgggacat ctttccacgc ttctttgcaa cgctgggtat
    15241 agaccagcgt ggcgcggtcc gggcgtttgc ccgcgacgtt atccggggtg taggcgtcat
    15301 cgtggcgcag cttacggtca gcggtgtaac ggttgatcat cgagtccatg ttgccagcgg
    15361 tgacgccgaa gaacaggttc ggtttaccca gacgcataaa gtcgtctttg ctgttccagt
    15421 ccggctgggc gatgatcccc acgcggaagc cctgcgcttc cagcatacgg ccgcaaatcg
    15481 ccatgccgaa gctcggatga tcgacatacg cgtcgcccgt caccagaatg atgtcgcagc
    15541 tatcccagcc aagttgatcc atctcttcac gtgacatcgg caaaaacggc gccggcccaa
    15601 aacaggcggc ccagtactgc ggccaggaga aaaggtcgcg atccggttgg atcagggaga
    15661 tagcgctcat attgcttcca aaaaattggc aaaaaaataa tcaaaggtcg gggattataa
    15721 gctggaatgg aagagaaatc gaattgattg gtgaggctgc actctgtagc ggggccgatt
    15781 gcctgccccg tcggttatcg tacttatgga cgagcaggca tatctgctac tttgataata
    15841 ggattttgtt cttcgagcaa attcaacagt accggcgtga catgatacat ggattctgca
    15901 atcatgactt tccctcgcag ggtgattttc ttccctataa accgttgata ataattgtat
    15961 ttttcaggcg gaagaatgag ctggacatag cgatcccagt caggttggtc catcatggcc
    16021 cctgccacac actgaaggtt tattgttttt aattcgagat ctttatccga gtgttggcct
    16081 tgattatctt caatgacgtg ctcgcgtttg accatcatac cttccagttc aatcgtgtca
    16141 ccctctttgt tgcaggaaga atcaaagttc acataagcga gaacatattt ccctttcttt
    16201 tcatcaaact caaaagtgga attgtaataa atacctaaag gttcgctgta taaaaaggag
    16261 tagcgcttat agctctcgat atcgcgttga cagtttccgc cgccattgat cattaagtct
    16321 ctgtattttt gccatacttt ttctaaattg attggctgat ctgcaccagt cgtaaggtat
    16381 tctgccgtat tgtccatgac atatttgata ttattcgctt tcagcgcctc acaaaaatcg
    16441 gttgtgttct gaatatacag cgccttttta cgctgtgact caggagaaag cagctctttg
    16501 aggagtttga tattacgatg ctctgtctcg gtaatgaggt aatcaacgtt cgcatagcgt
    16561 gggcgatacc acggctgctg tcggaagtac cgatccatct caccgcccgg tctgaaaata
    16621 taaccgtgac gagcataaat ctcattaagc ataattttaa gatcggctat cgaggttgcg
    16681 ctggtttgca cgcttcttac ctgaagccag gtccgcgagg cttcaggaaa tcggccttcc
    16741 agcgtgatgt gctctatctg cggtgcaaaa gcaagatagc tgccgtaatc caacagagtt
    16801 cccttcgtcc ccatgggaat gagtcctttc cttttaggcg tcacgagaaa atcgatacag
    16861 cgcgtatgct cacttccagt aatcaccgaa tggtcattct cttgttcaaa aaactggatg
    16921 tcacaccacg gcgcgccact catcatagaa aaatcgtcag gaacaacgcg ctgccatttt
    16981 cgaacgtcgg gcaactcagc gtaaaacctg agccactcat ctgcagtggc ggtataatca
    17041 tcgttttcgc tgccataaaa gggttcgcga ctgtcaccga aaaagataaa gtcattaagc
    17101 gtgtagtctg tgaccttgcc ctgaaaatag atttttttat tttcgatctc agggcggaat
    17161 tttagttccg cattagctga gaagataaac aggcacataa atataaataa aaaacatttt
    17221 ttcattattt accactccct gtatctctct taacaatcaa tgtaatttta attatcagag
    17281 cacggcatat cagtctaaat cggcgcactg ctgtgctaat tttatacgca cattggtacg
    17341 ccgcgtatct tctggtggat acaccttatc gatcattgcg ttaagcttgt tacagtccaa
    17401 ccaggccatc cggtaggcag tcatcaggct atgcctttca tcctggtaat caaggctggc
    17461 tacaataagg gcttccgaca acgccgtatg ttgctgttgc atactttgca gtatccccgc
    17521 cagaatatcc ggcggcagcg cgtcctcttt cgaggctgta tgcaatgtgc gtgaaatcag
    17581 gaaattccag ccgtccgtca acttatcctg agggatgtgc tgccagttca gcatctgccc
    17641 tttcaccaac gcacgcagcg tctcgccatc cgcatcaata aacagcgacg ccagcagatt
    17701 tttattcgga tagaccgact gccccagcac ctgcggcgtc agttttatct gggcaagcag
    17761 cgctttagtt tgcccctgca acaagaaata atatgcgcga tacagcggat tttgcgcttc
    17821 acgccgctgc cagaaaaagg ccagtgtctc tttatcctga agctgtatcg cccccgaata
    17881 ggcttcatcg gtgaggagat cgggcatgac ccgtagcaga atgtcggcca tctcaaaaaa
    17941 agtctggcga aatccctcag gtttaaaacg gggcgtgggg agatactcca acggattttg
    18001 ccgccgtacg atggtgcgat ttgcctgcgc ctgcggggag tcgcccatga gctgctcgct
    18061 aaaaatacgc accgcagtga tattgccact ctcaaaagca gcaaaaaatg gcgcattgac
    18121 gaaatagcca tcttcccgcg agaacctaaa aggcgatgcc acacgtgcag tcagatcgcg
    18181 caagtttttt tctgatatgc ctggcgcttt taccgcctga accagtgtct gttccaacgt
    18241 actgttatca tgaatgctct ctaactgacg caggtcgcct gcctgaacct gcctgagcaa
    18301 ctgcgcaata ttttgctgtt gccattgata gctaatagca cgccacagct ccggcatcac
    18361 cgggcacagc atcccaatga acacaatatg gcacagtagc catgcgggcc acggcttgcg
    18421 cagccaggtt cccagcagca gcgcgggcag caagcccgcc caactcagaa tcggcaacag
    18481 gagcatcaac atccataccg tgcctgtttg actcaacaac tgggtgtact gcaacgtggg
    18541 taacagcaat accacgaatg cccactgtgg tagtaatacc cacagcaaaa tctgtcggct
    18601 gcgttttttg gaaaacatca ggatcagcag tgatgccacc gcagcggcat acccccacgg
    18661 tagaacacaa aacatcagca gttcagagcc aagccatcga ttaatataat ccatttacta
    18721 ttcctttagt cacttcgcga ctggacacag cgcattcagc ctttgtcgcg tatcgtgtag
    18781 tacttgttcg ctccccacta ctaaagcatt caacacctca cgcaattgct cacaggaaag
    18841 cccagcctgt aaaaaagcgg caggaaacgt cggtgtccag ggaagatagt gggcgatttg
    18901 ctcgttggat aacgctttct gcgcttgcat cgccttaatg atctgtatca gcaatgcgtt
    18961 ctctaatgct ccaccacgca gtcgtaatat ggcctgatgc agaggctcat tatttccgtc
    19021 ttccattgct cgtttccagt ccactacgtt tgcatcaata agcgactgaa tcattaccag
    19081 atcgccattg ctcagtatga aagtgagtag gttttcacga tcccacctct caatcggcgg
    19141 tgtgatcaat atttctggat tatgggttac ctcgcttatt agcgattccg ttttggctaa
    19201 caacaccatc gcttcgagcc tgcgcagagg aatagtggga gggtgtttct gccaaaaata
    19261 agcaaccaac tcagtgttac gttggataat gggataaata tagacagtat cattcaacag
    19321 ttctggcata atattcagca atagctgact aatttctagt ctgtactgct cgcgatactg
    19381 tgatatatag ttagatttat aaagcgtcag cagtggattt tctttacgag caacaatatt
    19441 gcgattctct ctggcggaag atgtctcgcc caccagttgc tggctaaaaa agcgtactat
    19501 cggtacgtta tgttggcgaa gagcggtagc aaatggcgta taaagaaatt cggcgttcgg
    19561 gatcgccgct tcagggcaag attctgccgc tgtcaaaaat ggcgaaatac ctcgtatttt
    19621 agccagataa cgcaataaat tttccggtgt atcgcggtgt tctgcagcca gcgtcaaaac
    19681 acttgccaat tgataacaag atgcatcctg caaaacctga acatccccct tcgcgcgctc
    19741 aaacagtcgg gtaattttat agttatctca gtcttcacca atgtggtgcc ataatcgcgg
    19801 gccgtccatc acataaacga aaacgaacaa aaaaatagta tgggacacga tagttcccag
    19861 tataaaaaat ggagactctc gactagaaaa aatagcaatt attatcgagg gcagcaatcc
    19921 tgatatcaat aaatatacga tataaatatc ttttgaatca atccagaata atcctcccca
    19981 cactacacag acaacgctca cctgcggaag aacaacacgc aagaaaaccc gccgatagcg
    20041 caaagaatca aatgcgccga caattaacct caataataca acgccataaa taccccacgc
    20101 gctcatcaat attactgaat cccacatcat ccacgcaaat gattcaccca taaagtatcc
    20161 ttactttcca tgctcattac tgagttcaaa ttcctcgttc ctattttccg ataacacagc
    20221 gagctaaacg cactaataac tatagtaaat acaatgattg tatatattgc ccggcacgga
    20281 ggatattatc atcaacaaca aactccatcc gtttcccaaa ttcattattg cccgctattt
    20341 tttctgatga taaaacacat caaattcaaa ctgccatgag aaaggttccg gtttgttgct
    20401 attatcaaag gcaacggctt gtgcatacag ttcgtccgtc aataattccg gcacgacgct
    20461 aatcaaactg gtacaaatat ctcgcgccaa aagttgttgt tgcagaaaag tttgttcatc
    20521 agccgtacta tcattaaaaa cacgattcag taggtccaat aatggattgt tttgtaagag
    20581 ctgatgccga tattgctttg cctgtacaga atcgccaata aaccaggagg caaacgtccc
    20641 aacagcagaa cgattaagcc ggtcgatggc caaaaccaac caaatttttt cagttccgcc
    20701 cgcaatatca aaaggggaaa tgcgttttgc gagatgctca atccgcctat tcgtccccca
    20761 atcccctgcg ttttgcggct gcatggcttg cgacatcaaa tgatttaaaa aaacgcggtc
    20821 atcagtcgta tcgatttttc gtaacagcgt ttcttccgcc acctgctgtg cctgataggc
    20881 atcgcgccga tgatgcctat cgagaatatc ccccatgtgc gccaacaaca gcagcaatac
    20941 gaccacatag cacccggccc aaaggtggtg tggttggcgt aatcggtggc taaacagtag
    21001 cgccaacaat aaactaagcc ccagcatcca ccctgcacta atcggaaaga aaagcgtttc
    21061 atcatccgca gcaaaccata gcaaaagaac cagcgcaatc tatggcaaag caatccacag
    21121 caacacgcga cgaggcgttt ggaacaaaaa agccaggcaa ataacaacga agagcagaat
    21181 aagatagccg cctgtagtaa acatccagaa cgtcagtagc cgccatccct cttcattgat
    21241 tctcatcgaa tatccctggt tcgcctttac gacgccggat tcaccagcat ttgcccaatc
    21301 gagccgcgat cagccatttc cagcgtctgg ctgttgaaat agaacgggaa gtgcggccag
    21361 gacggctgac cgtagtagac cagcaattcg acttgcccat ccacccagac ggtatctttc
    21421 cagcctctat cttccgggaa cggcatagcg ccgttgacgt tacgaatcag gaaagagacg
    21481 ccctcaatat ggaacgactg cggcatatcg gcgcgtaccg tccagcgctc ccaggtgcct
    21541 tgttgggcgg taatatcaat gcgattcaca tcccacagtt ggccgttaat ccccggatcg
    21601 tcgccaagac tgatgtcccg actgcggaca ggcgcgccgc tcatgatctc cgtcggcaac
    21661 agacgcatcg gcagattatc ggtcaccagc ggcagcaatc cggttggccg taacgtcagc
    21721 accagggtcg aaaccagaat actggaaggc tcaaagaaac cgcgaatccg atcgactatg
    21781 ctggccgctt ccccgcaggt gatcgagact tcgtcgccgt tggtcatatc aaccaggatt
    21841 tcacgtcgct cgtcgggcgc cagtgacaac tgtttgacgg aaaccggcgc aggtaaaaag
    21901 ccctgatcgc ctgaaatcac atgcagcgcc cggccatcgc tcatctgaag ctgatagcgc
    21961 cgcgagttcg aggcgttcaa caaccgtaac cgcacccagc cgcgggacac ttcgacatag
    22021 gggctttgcg cgccgttcac cagcagcgta tcgccgacaa aaccaccgct gcccggttcg
    22081 ctgtactccg gcgtcccaaa gttatccagc cgtttatcct ggataataac gggaaaatca
    22141 tccacgccgt aatggttcgg aatgggcagc gttttactga tgtcatcttc gaccagccac
    22201 attccggcca ggccgttata cacctgctgc gcagtgcggt taggcgtgtt agcgtgatac
    22261 cacagcgtcg cggcgctctg acgaatc
//
LOCUS       DAGWFR010000060        21879 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.061, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000060 DAGWFR010000000
VERSION     DAGWFR010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 21879)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21879)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21879
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.061"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..477)
                     /locus_tag="MOX77_002302"
     CDS             complement(<1..477)
                     /locus_tag="MOX77_002302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HCA3357821.1"
                     /translation="MSFNTLIDWNSCSPEQQRALLTRPAISASDSITRTVSDILYNVK
                     TRGDDALREYSAKFDKTEVTALRVTPEEIAAAGARLSDELKQAMAAAVKNIETFHSAQ
                     TLPPVDVETQPGVRCQQVTRPVASVGLYIPGGSAPLFSTVLMLATPARIAGCQKVVL"
     gene            complement(580..1479)
                     /gene="hisG"
                     /locus_tag="MOX77_002303"
     CDS             complement(580..1479)
                     /gene="hisG"
                     /locus_tag="MOX77_002303"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005128078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HCA3357822.1"
                     /translation="MLDNTRLRIAIQKSGRLSDDSRELLARCGIKINLHTQRLIAMAE
                     NMPIDILRVRDDDIPGLVMDGVVDLGIIGENVLEEELLNRRAQGEDPRYLTLRRLDFG
                     GCRLSLATPVDEAWDGPAALDGKRIATSYPHLLKRYLDQKGVSFKSCLLNGSVEVAPR
                     AGLADAICDLVSTGATLEANGLREVEVIYRSKACLIQRDGEMAQSKQQLIDKLLTRIQ
                     GVIQARESKYIMMHAPSERLEEVIALLPGAERPTILPLAGEQQRVAMHMVSSETLFWE
                     TMEKLKALGASSILVLPIEKMME"
     misc_feature    complement(1527..1650)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00514"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="His leader region; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF00514"
     gene            complement(1626..1667)
                     /gene="hisL"
                     /locus_tag="MOX77_002304"
     CDS             complement(1626..1667)
                     /gene="hisL"
                     /locus_tag="MOX77_002304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="his operon leader peptide"
                     /protein_id="HCA3357823.1"
                     /translation="MTRVQFKHHHHPD"
     gene            1830..2654
                     /locus_tag="MOX77_002305"
     CDS             1830..2654
                     /locus_tag="MOX77_002305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HCA3357824.1"
                     /translation="MKKVAIVGLGWLGMPLAMSLAARGWQVTGSKTTLDGVEAARMSG
                     IESYPLRLEPELVCEADDLDALLDVDALVITLPARRSGPGEDFYLQAMQELVDSALAY
                     RIPRIIFTSSTSVYGDAQGVVKENTPRNPVTASGRTLKELEDWLHNLPGTSVDILRLA
                     GLVGPGRHPGRFFAGKTAPDGQHGVNLVHLEDVVGAITLLLQAPKGGHIYNICAPAHP
                     ARNVFYPQMTRLLGMAPPHFRDAPDNGKGKIIDGSRICNELGFEYQYPDPLVMPME"
     gene            2700..3614
                     /locus_tag="MOX77_002306"
     CDS             2700..3614
                     /locus_tag="MOX77_002306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCA3357825.1"
                     /translation="MKPLLDVLIILDALEKEGSFAAASAKLFKTPSALSYTVHKLEND
                     LNIQLLDRSGHRARFTRTGKMLLEKGREVLHTVRELEKQAIKLHEGWENELVIGVDDT
                     FPFSLLAPLIDAFYQRHSVTRLKFVNGVLGGSWETLTQGRADIIVGAMRAPPPDTGFG
                     FARLGDLELVFAVAPHHPLVHEEEPLSRQTIKRFRAIVVGDSVHSSRSIGSELLDAQE
                     AITVFDFKTKLELQISGLGCGYLPRYLAQRFLESGALIEKKVVAQIVYEPVWVGWNEQ
                     TAGLASGWWRDEILANNAIAGVYAKSPV"
     gene            3848..3910
                     /gene="yoeI"
                     /locus_tag="MOX77_002307"
     CDS             3848..3910
                     /gene="yoeI"
                     /locus_tag="MOX77_002307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein YoeI"
                     /protein_id="HCA3357826.1"
                     /translation="MGQFFAYATAFAVKENDHVA"
     gene            3900..5258
                     /gene="plaP"
                     /locus_tag="MOX77_002308"
     CDS             3900..5258
                     /gene="plaP"
                     /locus_tag="MOX77_002308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416518.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine/proton symporter PlaP"
                     /protein_id="HCA3357827.1"
                     /translation="MSHNVTPNTSRVELRKTLTLVPVVMMGLAYMQPMTLFDTFGIVS
                     GLTDGHVPTAYAFALIAILFTALSYGKLVRRYPSAGSAYTYAQKSISPTVGFMVGWSS
                     LLDYLFAPMINILLAKIYFEALVPSIPSWVFVVALVAFMTAFNLRSLKSVANFNTVIV
                     VLQVVLIAVILGMVVYGVFEGEGAGTLASTRPFWSGDAHVIPMITGATILCFSFTGFD
                     GISNLSEETKDAERVIPRAIFLTALIGGLIFIFATYFLQLYFPDISRFKDPDASQPEI
                     MLYVAGKTFQVGALIFSTITVLASGMAAHAGVARLMYVMGRDGVFPKSFFGYVHPKWR
                     TPAMNIILVGAIALLAINFDLVMATALINFGALVAFTFVNLSVISQFWIREKRNKTLK
                     DHFQYLFLPMCGALTVGALWVNLEESSMVLGLIWAGIGLIYLACVTKSFRNPVPQYED
                     VA"
     gene            complement(5394..6824)
                     /gene="sbcB"
                     /locus_tag="MOX77_002309"
     CDS             complement(5394..6824)
                     /gene="sbcB"
                     /locus_tag="MOX77_002309"
                     /EC_number="3.1.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease I"
                     /protein_id="HCA3357828.1"
                     /translation="MTVKNDSIQSTFLFHDYETFGTHPALDRPAQFAALRTDNDFNVI
                     GEPEVFYCKPADDYLPQPGAVLITGITPQEAREKGENEAAFARRIHALFTVPKTCVVG
                     YNNVRFDDEVTRNIFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDD
                     GLPSFRLEHLTQANGIEHSNAHDAMADVYATIAMAQLVKTRQPRLFDYLYSHRSKHKL
                     AALIDVPQMKPLVHVSGMFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELD
                     SDTLRERLYTAKADLGDHAAVPVKLVHINKCPVLAQANTLRPEDADRLGINRQHCLDN
                     LKVLRENPQVRDKVVAIFAEAEPFATSDNVDAQLYDGFFSDADRAAMKIVLETEPRNL
                     PALDITFVDKRIEKLLFNYRARNFPGTLDDAEQQRWLEHRRQVLTPEFLQQYANELQM
                     LSQQYAEDKTKLGLLKSLWQYATEIV"
     gene            complement(7191..9533)
                     /locus_tag="MOX77_002310"
                     /pseudo
     CDS             complement(7191..9533)
                     /locus_tag="MOX77_002310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461011.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector HECT-type E3
                     ubiquitin transferase"
     gene            9800..9892
                     /locus_tag="MOX77_002311"
                     /pseudo
     CDS             9800..9892
                     /locus_tag="MOX77_002311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308979.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal-binding domain-containing protein"
     gene            10152..12428
                     /gene="phsA"
                     /locus_tag="MOX77_002312"
     CDS             10152..12428
                     /gene="phsA"
                     /locus_tag="MOX77_002312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate reductase PhsA"
                     /protein_id="HCA3357829.1"
                     /translation="MSISRRSFLQGVGIGCSACALGAFPPGALARNPIAGINGKTTLT
                     PSLCEMCSFRCPIQAQVVNNKTVFIQGNPSAPQQGTRICARGGSGVSLVNDPQRIVKP
                     MKRTGPRGDGEWQVISWQQAYQEIAAKMNAIKAQHGPESVAFSSKSGSLSSHLFHLAT
                     AFGSPNTFTHASTCPAGKAIAAKVMMGGDLAMDIANTRYLVSFGHNLYEGIEVADTHE
                     LMTAQEKGAKMVSFDPRLSIFSSKADEWHAIRPGGDLAVLLAMCHVMIDEQLYDASFV
                     ERYTSGFEQLAQAVKETTSEWAAAQADVPADVIVRVTRELAACAPHAIVSPGHRATFS
                     QEEIDMRRMIFTLNVLLGNIEREGGLYQKKNASVYNKLAGEKVAPTLAKLNIKNMPKP
                     TAQRIDLVAPQFKYIAAGGGVVQSIIDAALTQKPYPIKAWIMSRHNPFQTVTCRSDLV
                     KTVEQLDLVVSCDVYLSESAAYADYLLPECTYLERDEEVSDMSGLHPAYALRQQVVEP
                     IGEARPSWQIWKELGEQLGLGQYYPWQDMQTRQLYQLNGDHALAKELRQKGYLEWGVP
                     LLLREPESVRQFTARYPGAIATDSDNTYGEQLRFKSPSGKIELYSATLEELLPGYGVP
                     RVRDFALKKENELYFIQGKVAVHTNGATQYVPLLSELMWDNAVWVHPQTAQEKGIKTG
                     DEIWLENATGKEKGKALVTPGIRPDTLFVYMGFGAKAGAKTAATTHGIHSGNLLPHVT
                     SPVSGTVVHTAGVTLSRA"
     gene            12443..13021
                     /gene="phsB"
                     /locus_tag="MOX77_002313"
     CDS             12443..13021
                     /gene="phsB"
                     /locus_tag="MOX77_002313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate reductase electron transport protein
                     PhsB"
                     /protein_id="HCA3357830.1"
                     /translation="MNHLTNQYVMLHDEKRCIGCQACTVACKVLNDVPEGFSRVQVQI
                     RAPEQASNALTHFQFVRVSCQHCENAPCVSVCPTGASYRDENGIVQVDKSRCIGCDYC
                     VAACPFHVRYLNPQTGVADKCNFCADTRLAAGQSPACVSVCPTDALKFGRLDESEIQR
                     WVGQKEVYRQQEARSGAVSLYRRKEVHQEGKA"
     gene            13018..13782
                     /locus_tag="MOX77_002314"
     CDS             13018..13782
                     /locus_tag="MOX77_002314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate reductase cytochrome B subunit"
                     /protein_id="HCA3357831.1"
                     /translation="MNTIWGAELHYAPDYWPLWLIYAGVVVLLMLVGLVIHALLRRML
                     APKTAGGEEHRDYLYSLAIRRWHWGNALLFVLLLLSGLFGHFSLGPVALMVQVHTWCG
                     FALLAFWVGFVLINLTTGNGRHYRVNFSGLVTRCIRQTRFYLFGIMKGEAHPFAATEQ
                     NKFNPLQQLAYLAIMYALVPLLIITGLLCLYPQVAGLGPVMLVLHMALAIIGLLFICA
                     HLYLCTLGDTPGQIFRSMVDGYHRHRTAPRGDKSAV"
     gene            13906..15078
                     /gene="dacD"
                     /locus_tag="MOX77_002315"
                     /pseudo
     CDS             13906..15078
                     /gene="dacD"
                     /locus_tag="MOX77_002315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461007.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="serine-type D-Ala-D-Ala carboxypeptidase DacD"
     gene            15229..15696
                     /gene="sbmC"
                     /locus_tag="MOX77_002316"
     CDS             15229..15696
                     /gene="sbmC"
                     /locus_tag="MOX77_002316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase inhibitor SbmC"
                     /protein_id="HCA3357832.1"
                     /translation="MDYEIRQEQKRKIAGFHMVGPWEHTVKQGFEQLMTWVDRQRIVP
                     VEWIAVYYDNPDVVPAEKLRCDTVVSVAENFILPDNSEGVIVTAIEGGEYATAVARVE
                     DRDFAKPWERFFDVLEQDSAYQIASAPCFETYLNNGMEDGYWDIEMYIPVQRK"
     gene            15815..16873
                     /locus_tag="MOX77_002317"
     CDS             15815..16873
                     /locus_tag="MOX77_002317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HCA3357833.1"
                     /translation="MRADKSLSPFEIRLYRHYRIVHGIRIALAFILTFLLVRLFSIPE
                     GTWPLITLVVIMGPISFWGNVVPRAFERIGGTILGAALGLVALRLELFSLPLMLVWCA
                     IAMFLCGWLALGKKPYQALLIGITLAVVVGAPAGDMNTALWRGGDVILGALLAMLFTG
                     IWPQRAFLHWRIQLAHCVTAYNRVYQAALSPNLLERPRLDKYLQRLLNDVVKMRGLIT
                     PASKETRIQKSIFEAIQTINRNLVCMLELQINAHWATRASHFVMLNTHTLRETQQMTQ
                     QTLLTIAHALFEGNPQPVLANTGKLNDIAAELRQLMNEQQGDAVAETPIHGYVWLSME
                     TARQLELLSHLICRALRK"
     gene            17118..17453
                     /locus_tag="MOX77_002318"
     CDS             17118..17453
                     /locus_tag="MOX77_002318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF496 family protein"
                     /protein_id="HCA3357834.1"
                     /translation="METTKPSFQDVLEFVRLFRRKNKLQREIQDIEKKIRDNQKRVLL
                     LDNLSDYIKPGMSVEAIQGIIASMKSDYEDRVDDYIIKNAEISKERRDISKKLKAMGE
                     MKHADVKAE"
     gene            complement(17487..18353)
                     /gene="pduX"
                     /locus_tag="MOX77_002319"
     CDS             complement(17487..18353)
                     /gene="pduX"
                     /locus_tag="MOX77_002319"
                     /EC_number="2.7.1.177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015632997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonine kinase PduX"
                     /protein_id="HCA3357835.1"
                     /translation="MAVAQCPASCGELIQGWILGSEKLVSCPVDWYSTVAVTAAPPLV
                     NERPLSRAMVERVLAHWQYPAHWSNEIRVDVRSSIPVAKGMASSTADIAATAVATAHH
                     LGHSLDETTLAQLCVSIEPTDSTVFHQLTLFDHNNAATQIACEPPPPIDLLVLESPVT
                     LRTQDYHRLPRQQKLIASSPTLQQAWNLVQEACITQNPLRLGEAATLSAIASQTLLPK
                     SGFTALLSLVEECDLYGLNVAHSGSVVGLMLDRKRHDIARLKGKLAEKKLTRHWPKQH
                     LLKMVTGGVKLQ"
     gene            complement(18447..19661)
                     /gene="pduW"
                     /locus_tag="MOX77_002320"
     CDS             complement(18447..19661)
                     /gene="pduW"
                     /locus_tag="MOX77_002320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propanediol utilization propionate kinase PduW"
                     /protein_id="HCA3357836.1"
                     /translation="MSYKIMAINAGSSSLKFQLLEMPQGDMLCQGLIERIGMADAQVT
                     IKTHSQKWQETVPVADHRDAVTLLLEKLLGYQIINSLRDIDGVGHRVAHGGEFFKDST
                     LVTDETLAQIERLAELAPLHNPVNALGIHVFRQLLPDAPSVAVFDTAFHQTLDEPAYI
                     YPLPWHYYAELGIRRYGFHGTSHKYVSGVLAEKLGVPLSALRVICCHLGNGSSVCAIK
                     NGRSVNTSMGFTPQSGVMMGTRSGDIDPSILPWIAQRECKTPQQLNQLLNNESGLLGV
                     SGVSSDYRDVEQAANTGNRQAKLALTLFAERIRATIGGYIMQMGGLDALVFTGGIGEN
                     SARARSAVCHNLQFLGLAVDEEKNQRNATFIQTENALVKVAVINTNEELMIAQDVMRI
                     ALPATEGLCVPA"
     gene            complement(19646..20098)
                     /gene="pduV"
                     /locus_tag="MOX77_002321"
     CDS             complement(19646..20098)
                     /gene="pduV"
                     /locus_tag="MOX77_002321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propanediol utilization protein PduV"
                     /protein_id="HCA3357837.1"
                     /translation="MKRLMFIGPSQCGKTSLTQSLRGEALHYKKTQAIEWSPMAIDTP
                     GEYLENRCLYSALLTSACEADVIALVLNADAQWSPFSPGFTVPMNRPTIGLVTKADLA
                     DPQRISLVAQWLTQAGARQIFITSALNNSGLDAVLDFLNSKEPLCLTK"
     gene            complement(20103..20453)
                     /gene="pduU"
                     /locus_tag="MOX77_002322"
     CDS             complement(20103..20453)
                     /gene="pduU"
                     /locus_tag="MOX77_002322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propanediol utilization microcompartment protein
                     PduU"
                     /protein_id="HCA3357838.1"
                     /translation="MERQPTTDRMIQEYVPGKQVTLAHLIANPGKDLFKKLGLQDAVS
                     AIGILTITPSEASIIACDIATKSGAVEIGFLDRFTGAVVLTGDVSAVEYALKQVTRTL
                     GEMMQFTTCSITRT"
     gene            complement(20453..21007)
                     /gene="pduT"
                     /locus_tag="MOX77_002323"
     CDS             complement(20453..21007)
                     /gene="pduT"
                     /locus_tag="MOX77_002323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propanediol utilization microcompartment protein
                     PduT"
                     /protein_id="HCA3357839.1"
                     /translation="MSQAIGILELTSIAKGMELGDAMLKSANVDLLVSKTICPSKFLL
                     MLGGDIGAIQQAIETGTSQAGEMLVDSLVLANIHPSVLPAISGLNSVDKRQAVGIVET
                     WSVAACISAADRAVKGSNVTLVRVHMAFGIGGKCYMVVAGDVSDVNNAVTVASESAGE
                     KGLLVYRSVIPRSHEAMWRQMVEG"
     gene            complement(21010..>21879)
                     /gene="pduS"
                     /locus_tag="MOX77_002324"
     CDS             complement(21010..>21879)
                     /gene="pduS"
                     /locus_tag="MOX77_002324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin reductase PduS"
                     /protein_id="HCA3357840.1"
                     /translation="VEQQFPVTRRTLTVNGAVARPLTVTVPVGMSLHEVLALAGGATV
                     DNPGFINGGPMMGGLITSLDNPVTKTTGGLLVLPKSHPLIQRRMQDERTVLSVARTVC
                     EQCRLCTDLCPRHLIGHELSPHLLVRAVNFHQAATPQLLLSALTCSECNVCESVACPV
                     GISPMRINRMLKRELRAQNQRYEGPLNPADEMAKYRLVPVKRLIAKLGLSPWYQEAPL
                     VEEEPSVEKVTLQLRQHIGASAVPTVAVGERVTRGQCVADVPPGALGASIHASIDGIV
                     SAISEQAITVVRG"
BASE COUNT         5041 a         5475 c         5993 g         5370 t
ORIGIN      
        1 cagaaccacc ttctggcatc ccgcaatgcg cgccggcgtc gccagcatca gcaccgttga
       61 gaagagcgga gccgagccgc cgggaatata cagaccgaca gacgcgacgg gacgcgtaac
      121 ctgctggcaa cgcacgcctg gctgggtttc cacatctaca ggcggtagcg tctgcgcgga
      181 atggaacgtt tcaatatttt tgacggcagc ggccatcgcc tgttttaatt cgtcgctcag
      241 acgcgcgccg gcggcggcga tctcttcagg ggtgacgcgt agcgctgtca cttctgtttt
      301 atcaaattta gcgctgtatt cacgcagggc atcgtcaccg cgcgttttta cattatacag
      361 aatatcgctg accgtccggg taatactgtc agaggcggaa atcgccggac gcgtcagcag
      421 cgcacgctgc tgttcagggc tacagctgtt ccagtcaatc agggtattga agctcatggt
      481 ctttactcca tcacagggtt ccgccttatc cggcctactg aacccaaaat atcaacgcat
      541 tacgtaggcc tgataagcgc agcgccatca ggcgtcagat cactccatca tcttctcgat
      601 cggcagtacc agaatcgagc tggcgccaag cgctttcagt ttctccatgg tttcccagaa
      661 caacgtttcg ctgctgacca tgtgcatcgc cacgcgctgt tgctcgcctg ccagcggcag
      721 aattgtcggc ctttcggcgc ctggcagcag ggcgataacc tcttccagtc gttcacttgg
      781 cgcgtgcatc atgatgtatt tcgattcgcg cgcctgaatc acgccctgaa tacgggtcag
      841 caatttatcg atcagctgtt gcttgctctg tgccatctca ccgtcgcgct gaatcagaca
      901 ggctttagag cggtagataa cttcgacttc acgcaggccg ttagcttcaa gcgtcgcgcc
      961 ggtagagacc aaatcgcaga tagcgtcggc cagccccgcg cgcggcgcga cttcgacaga
     1021 accatttaac agacacgatt taaaagagac gcctttctgg tcgaggtagc gtttgaggag
     1081 gtgcggataa gaggtagcga tacgtttacc gtccagcgcg gccgggccgt cccaggcttc
     1141 gtcaaccggc gttgccagcg ataaacggca gccgccgaag tcaagacggc gcagggttaa
     1201 atagcgtgga tcttcgccct gcgcgcggcg gttgagtagc tcttcttcca gcacgttttc
     1261 gccgataata ccgagatcga ccacgccatc catcaccaga cccggaatgt catcatcacg
     1321 cacgcgcagg atatcaatcg gcatgttttc cgccatcgca atcaggcgct gagtgtgtaa
     1381 attaattttt atgccgcagc gggccagcaa ttctcgtgaa tcatcgctta aacggcctga
     1441 tttctgaata gctatgcgta agcgggtgtt gtctaacatt ctgcgttcct ctttatcctg
     1501 tctgaaccgg tctgtatcgc gcgccaaaaa aaaagccccc ggaagatgat cttccggggg
     1561 ctttctcatg cgttcatgca ccactggaag atctgaatgt cttccagcac acatcgcctg
     1621 aaagactagt caggatgatg gtgatgttta aattgaacgc gtgtcataaa aattccgatg
     1681 aatgcttatt catttgatac cttttaacct aaaccacttt tacgccttaa agcaagcgct
     1741 tttttcattt cgcatttata gtatgaattg tcagtcacgg cgggctggcg tagccttatg
     1801 tataaggcgt taaagtcagg agaaaatgga tgaaaaaggt cgcaattgtc ggtttaggtt
     1861 ggttaggcat gccgctggca atgtcgctgg cagcgagagg ctggcaggtt accggcagca
     1921 aaaccaccct tgacggggtg gaagcggccc gtatgagtgg aattgaaagc tatccgctgc
     1981 gtctggagcc ggagctggtc tgtgaggcgg acgatcttga cgctctgctg gatgtcgatg
     2041 cgctggtgat aacactgccc gcgcgccgta gcggtccggg agaggatttt tatctgcagg
     2101 cgatgcagga gctggtcgac agtgcgctgg cttatcgtat cccgcgtatt atttttacca
     2161 gttcgacgtc tgtttacggc gatgcgcaag gcgtggtgaa agagaatacg ccgcgtaatc
     2221 cggtcacggc cagcgggcgt accctgaagg aactggaaga ttggctgcat aatctgccgg
     2281 gcacgtcagt ggatattctg cggctggcgg ggttagtcgg gcctgggcgc catcccggac
     2341 gtttctttgc cggaaaaacc gcgccggatg gtcaacacgg ggtcaatctg gtgcatcttg
     2401 aagacgtggt tggcgcaatt acccttttgc tacaggcgcc aaaagggggg cacatctata
     2461 atatatgtgc gccggcgcat ccagcccgca acgtgtttta tccgcaaatg acgcgcttgc
     2521 tgggaatggc gccgccgcat tttcgtgacg caccggacaa cggcaaaggg aagattatcg
     2581 acggtagccg gatttgtaat gagctgggat ttgaatatca atatcccgat ccgttggtga
     2641 tgccgatgga gtgagtcgct gtccagcagg tggtcgccat atagcgcaag gggacgagta
     2701 tgaaaccact gctggacgtt ctgattattc ttgatgcgtt agaaaaagaa ggcagcttcg
     2761 cggcggcgtc ggcaaaatta tttaaaacgc cgtccgccct cagttatacc gttcataagc
     2821 tggaaaacga tcttaatatc caactgctcg accgtagcgg gcatcgcgcg cgatttacgc
     2881 gaaccggtaa gatgctactg gaaaaaggcc gtgaagtgtt gcacaccgtt cgcgagctgg
     2941 aaaagcaggc gattaaactg catgaaggct gggagaacga actggtcatc ggtgtggatg
     3001 atacctttcc cttttctctt ctggccccgc ttatcgacgc tttttatcaa cgccacagcg
     3061 tgacgcgcct taaatttgtc aatggcgttc tcggcggttc atgggagacg ctgacgcagg
     3121 gaagggcgga tattattgtt ggcgccatgc gcgcgccgcc gcctgacacc ggctttggct
     3181 ttgcaagact gggcgatctt gaactggtgt ttgctgtcgc cccgcatcat ccgctggttc
     3241 atgaagagga accgcttagc cgccagacga tcaaacgttt tcgcgcgatt gtggttggcg
     3301 atagcgtcca ttcctcgcga tcaatagggt ctgaactgct cgacgctcag gaagcgatta
     3361 ccgtgtttga ttttaaaacc aagctggagc tgcaaattag cggcctggga tgcggctatt
     3421 taccgcgtta tctggcgcag cgatttttgg aaagcggcgc gcttatagag aagaaagttg
     3481 tggcgcaaat cgtctatgaa ccggtgtggg ttggctggaa tgaacagacc gccgggctgg
     3541 ccagcggctg gtggcgggat gaaattttag caaataatgc tattgctggg gtgtatgcaa
     3601 aatcgccggt ttaaaaatca atcgcttatg aaaaataatt ttttgaacgc gctcgcattc
     3661 tcttgtcatt tcacttcaat ttagggcaga atatgccgct tgcaaaaaat gacactaacc
     3721 gacgttttaa tacgcgtcgg ttattttttt gcttcaaaca catcattcaa taccaagagg
     3781 ccgggcttcg taccggatag atacttactt aaaaatcgac agttgttgtc gctgaggaat
     3841 ccagaaaatg gggcaatttt ttgcttacgc gacggcattc gccgtaaagg agaatgacca
     3901 tgtcgcataa cgttactcca aacacctctc gcgtggaatt acgtaaaacg cttacgttag
     3961 ttccggttgt aatgatgggt cttgcctata tgcagccgat gacgctgttc gatacatttg
     4021 gtatcgtttc aggcctcact gacggtcacg taccgacggc gtatgcattc gcgttaatcg
     4081 cgattctgtt tacggcgttg agctacggga aactggtgcg tcgctatcct tccgcgggtt
     4141 cggcgtacac ctatgcccag aaatccatca gcccgaccgt tggctttatg gtgggttggt
     4201 cttctctgct cgattatctg ttcgcgccga tgatcaacat tctgttggcg aaaatttatt
     4261 ttgaagcgct ggtgccctcc attccctcat gggtgttcgt cgtggcgctg gtggccttta
     4321 tgacggcctt taacctgcgc agcctcaaat cggtcgctaa cttcaacact gtgattgtgg
     4381 tgctacaggt ggtgctgatt gcggtcattc tgggcatggt ggtttatggc gtatttgaag
     4441 gcgaaggcgc cggtacgctg gcgagcaccc gtccgttctg gtccggcgat gcgcacgtta
     4501 tcccgatgat tacgggagcg acgatcctgt gcttctcctt taccggcttt gacggcatca
     4561 gtaacctgtc ggaagagacc aaagatgctg agcgcgtgat cccgcgtgcg attttcctga
     4621 ccgcgctgat tggcggccta atcttcatct ttgcaaccta tttcctgcaa ttgtacttcc
     4681 cggatatctc tcgctttaaa gatccggatg cgtctcagcc ggaaatcatg ctgtacgtgg
     4741 cgggtaaaac cttccaggtg ggcgcgctga tcttctctac tatcaccgta ctggcttccg
     4801 gtatggcggc gcatgcaggc gtagcgcgcc tgatgtacgt aatggggcgc gacggcgtat
     4861 tcccgaaaag cttcttcggt tacgttcatc cgaaatggcg tacgccagcg atgaacatca
     4921 tcctggtcgg ggcgatcgcg ctgctggcga ttaattttga cctggtgatg gcgacggcgc
     4981 tgattaactt tggcgcgctg gtcgcgttta ccttcgttaa cctgtcggtg atttcgcagt
     5041 tctggatccg tgagaagcgt aataagacgt tgaaggatca cttccagtat ctgttcctgc
     5101 ccatgtgcgg cgcgctcacg gttggcgcgt tgtgggttaa cctggaagaa agctcaatgg
     5161 tactgggcct gatctgggcg ggtatcgggc tgatttatct ggcgtgcgta actaaaagct
     5221 tccgcaaccc ggttccacag tacgaagacg tcgcgtaatc gcgcgtatta tcggcaatag
     5281 taaaaccgga ggcagtgcct ccggtttttt gtctgccatc cagcacgttt accggatggc
     5341 ggcgtcacta tttatccgct ctggattaac aatgcccgtc aggcattggt caattacaca
     5401 atctcagttg cgtactgcca cagtgatttc agcagcccca gcttcgtttt atcttccgca
     5461 tactgctgag aaagcatctg caattcattg gcatactgtt gtaaaaactc tggcgtcagt
     5521 acctgacggc gatgctccag ccagcgctgc tgctctgcgt catccagcgt accgggaaaa
     5581 ttgcgtgcgc ggtaattaaa cagcagcttc tcaatgcgct tatcgacaaa ggtaatgtcc
     5641 agcgcgggca ggttacgcgg ctcggtttcg agtacgattt tcatggctgc gcgatcggca
     5701 tcgctgaaaa aaccatcata gagctgggca tcaacgttat ccgaggtggc aaaaggttcg
     5761 gcttcggcga aaatcgccac cactttgtcg cggacctgcg ggttttcacg cagcactttc
     5821 aggttatcca ggcaatgctg gcggttaatt cccagccggt cggcatcctc cgggcgcaag
     5881 gtattcgcct gcgccagtac cggacattta ttgatatgca ccagctttac cggcactgcg
     5941 gcgtgatcgc caagatcggc tttggccgta taaagccgct cgcgaagggt gtcgctgtcc
     6001 agctcaagaa gaggagaaat atcgcctgct aaatcgacca tgatcaccgc gttacggttt
     6061 tcaggatgcc acgccagcgg cgcgacccag cttgtattac cgcgccacgc gccaaacatg
     6121 ccggagacat gcaccagcgg cttcatttgc ggaacgtcaa tcagcgccgc cagtttatgt
     6181 ttactgcggt ggctataaag ataatcaaac agtcgcggct ggcgtgtttt caccagttgc
     6241 gccatcgcaa tagtggcgta gacatccgcc atcgcatcat gcgcgttgct gtgttcgatc
     6301 ccgttcgcct gggttaaatg ttccagacga aagctgggca ggccgtcgtc gttttccggc
     6361 cagttaattc cctccgggcg cagcgcataa caggcgcgca tgacatccaa tagatcccaa
     6421 cgtgaattat catgctgcca gctccaggcg tagggatcgt aaaagttgcg ataaaaaata
     6481 ttgcgcgtga cttcatcatc aaaacgtaca ttgttgtagc ccacaacgca ggttttagga
     6541 acggtaaaca gcgcatgaat gcgtctggcg aaagcggctt cgttttctcc tttctcacgc
     6601 gcttcctgcg gcgtgatgcc ggtaatcagc actgcgccgg gctgcggtag ataatcatcg
     6661 gcgggtttgc aataaaacac ctccggctcg ccaataacgt tgaagtcgtt atccgtacgg
     6721 agcgcggcga attgcgcagg tctgtcgagg gccggatgcg taccgaaggt ttcgtaatcg
     6781 tggaagagga atgtgctctg tatgctgtcg tttttaactg tcacttgatg tacacgcctg
     6841 atgttatctg tatatgaaat attttattct tttattttgt cgttgattga ttgtatttgt
     6901 acaccaattg atattgttgc taatgttcgt acatgcgatg gtgagtacat aaacattaaa
     6961 atcattgagt acaaaatact aaaatgacca tcagcgacac taagctacgc tccctctatg
     7021 gtaaaccata ttccggccca tctgaaatta ctgattttga tttagtactg tatggaattt
     7081 aggccagggt caatctggcc gggatctcaa aaaatgcatg gactaaaacg ggtctatgta
     7141 cagagggaca caacgctgtg tcccttaatt tcatgcgggt tgaggctgga ctaggcccag
     7201 gccagtggca ggatggatga cagaacactc gggaaatatt ttctggcatg acgttgcata
     7261 ctatccacca caacgctggt acaggtaaag gcgccatgga ggccgtgaaa acggtcggac
     7321 cagtcggtaa actgttcgct ggacgggaag atcgccggag acagctccca gtctttctgc
     7381 atcagcgcct ccgcatagcc tctcagggcc ggcggagagt catgctcagt gccgaaaatg
     7441 gcgctggagg aatagcgtgc gaatgcggta ctaagacaga acagggtttc cgcctgcttc
     7501 tgtggggtgg cgtccgtcag gtgataagca ctgaggatgt gctggtagtg tgccgggctg
     7561 agtttgcctt caggaagcag ggggtcaaaa atggtgttca gacgcgacac tgaggcatca
     7621 tcaatcaact tcacggtgga atgtttctgg gtcgtggcgg caataaactg ctggttcagc
     7681 tccccgtgct cttcagcgct gaggatgata tcaatcagtt ccccaaagcg tcgctgcacg
     7741 gcctgctgat taaatgcggc gagaaacacc ggaaagtcat gacggaataa ctctaccgga
     7801 gagatttgcg cggtggaaac gttctctccg gctcgcagca ggtaaaagtt gtcccatgca
     7861 gtgtcaggag tagggtttag cattgttaac agcgtgtcag tggagagcat catcgccgtg
     7921 tctgaatcct gggaggaaag cagcaggaaa ttatctgcag cgcgggttgt ccagtccggg
     7981 ctgccgtcat aattgccgaa gagcccatta tggatgtggg gagacaccgt tgggtgagca
     8041 agatatcgtt cataaagcgc tgcagctttc tggcgggtgc catcagtgca gcccacgcct
     8101 gtcatacagt gtaaaatcac ctgattaaag agtccgttgt gagtggtcat ggcggcgttg
     8161 ttcctgtcaa acgaatccag caacacaggc cgtatgcgct gctgataata tgtgtcagga
     8221 gccggcaggg gaacgtcatt ataggtctgg cactggtggg caaaaaaacg ttcctgaaca
     8281 ggcccgagcc actcgctgat aagcgtactt tgcgtatagg gggggccagt acgctcacca
     8341 gcgaactttc aactggccgg atacatgcct ctgttaagcg gccactccgc aatgacttaa
     8401 ccaggtcttc cattgcccgg actttttcct gactgtattt atcgggcagg ctgtcaatgg
     8461 ttatcagaat acttttacca ttattgtgct catgatttaa aaatccatcc acagcgttct
     8521 cagtccaaag gagtggcatt tgcggccaga tatcacctgg acgaataaaa ttttcgcccc
     8581 ctgatactga cggaggtgat gaattatccg gttcatttaa aataacgcca gagaggttgg
     8641 ctttgtgacg tataagcgta ttttttaatg ttgtatcaat aaaagagggc tgttgttgtg
     8701 tagtaattga atactgtaaa acacttcatt catgtctgaa ttactaaatt ttgtattact
     8761 gcagactaca tcactcagtg tcaaataagt gaatcggcat tcgtcaaaat gtaaatgaga
     8821 tatatcagaa taagtaaatt ttgaatttga aaagttgaac ctcttaataa tatcgccgtc
     8881 tcgctccatg aagctgaggg gcaatatttt gctgaatgta atattacgga aatctgcgtt
     8941 tgaaaaatcg cgatctgcgg gcgtaagagt ttctccggct ttctgccgta aaactgcatc
     9001 cgtaagtttc ttagcccagt cggcaggtga tgacggggaa gacgtagcct gaagtgagag
     9061 ggagggtgat actggtggtg ttctaccttc agaaaccgtt ggcctgttat tggctgatac
     9121 agagacttca ccggggagcg gggctgcacc tgtcactctg taattataat cacatgattg
     9181 atttgcaata tgcttacgca tgagtgctgc agtcattttt gagacatctt cttctgaaat
     9241 atttttctta tatgtattat ttgtatcttt aatattttta acagtaagca atgtattgtt
     9301 taaggtattt tttctttcgg ctgaaagaat tcttttattt tttgtggtag cgatatctca
     9361 atcggtgagt cctttcatgt tttaaatttt tcatttaaag atgcatgcgt atttttaaca
     9421 ctggttattt ttgaggcgag cccgtttttc gtatgttcac ggatggtgtt aattaatttt
     9481 ttaacctggt taggaatagt agaaaaatta attgcgcctg atgatatctt cattagaatt
     9541 ccttatcaac atcattatgg aaaaacggtc tggattttta acgccttaaa agtaagctcc
     9601 atatgtcggt atggcgttgg agatcacaat tcaccatgct atctggcatg tttctttcag
     9661 aaagtgtcca tcctgtcatc atgtcaccgt attgtgggac gctggcgtat ctgcggaaaa
     9721 atccaggcat aagagagcgg gtcgggtaac ggagcccgta tgcacgcaaa aataaacccg
     9781 cttcgacgct caaccagcgt ttttcgccgg cattcgggat atcgtcggcg gacgttccgg
     9841 cgagtatgaa aaagaactgc gtaaagcgcg tgaaatcgct tttcaggaaa taatcgtttt
     9901 cttttaaata ttattacgtg ttattggaat tgtatcattt ttataattaa cagtgggttg
     9961 tttggtaatt ctgctgatta ttcgatgaca gtccatgtgc gtgttcagga aatgtaaaat
    10021 atttataaaa taaaaggttt tatcatgttg gcatgctcat attaacaact atttcaaatt
    10081 gtgattgaag ccgacatttc ataatacaaa ttaaatataa tcttcagcta tatctaataa
    10141 caggaggtta tatgagcatt agtcgtcgtt cttttttgca gggggtaggc ataggctgct
    10201 ctgcctgcgc gctgggcgct tttccgcccg gggcgctggc gcgcaacccg attgccggca
    10261 ttaacggtaa aaccacgcta acgccaagtt tgtgcgaaat gtgttccttt cgttgcccta
    10321 ttcaggcgca ggtagtcaat aacaagaccg tttttatcca gggcaatcct tctgcgccgc
    10381 agcaggggac gcgcatatgc gccaggggcg ggagcggcgt cagcctggtc aatgacccgc
    10441 aacggattgt aaaacctatg aaacgcaccg ggccacgcgg tgacggtgaa tggcaggtga
    10501 ttagctggca acaggcttac caggaaatcg cggcgaaaat gaatgccatc aaagcgcagc
    10561 atggccccga gagcgtggct ttctcttcca aatcgggctc gctctccagc catcttttcc
    10621 atctggctac ggcctttggt tcgcctaata cctttactca cgcctcaaca tgccctgccg
    10681 ggaaagccat tgcggcaaaa gtgatgatgg gcggcgatct ggcgatggat atcgctaaca
    10741 cgcgctatct ggtttcgttt ggccacaatt tgtatgaagg gattgaagtt gccgataccc
    10801 atgagttaat gaccgcgcag gagaaggggg ccaaaatggt gagcttcgat ccgcgtttgt
    10861 cgatattttc cagcaaggcg gatgagtggc acgctattcg tcccggaggg gatttagcgg
    10921 ttctgctggc gatgtgccac gtcatgattg atgaacaact ctacgatgcg tcttttgttg
    10981 agcgttatac cagcggattt gaacagttag cacaggcggt aaaagagacg acgtcggaat
    11041 gggccgccgc gcaggccgat gtcccagccg acgtcattgt ccgggtgaca cgcgaactgg
    11101 ccgcctgtgc gcctcacgct attgtcagtc ctggtcatcg cgcgacgttc tcgcaggaag
    11161 agatcgatat gcggcgtatg atttttacgc ttaatgtgct gctcggtaat attgagcgcg
    11221 aaggcgggct atatcagaaa aaaaacgcgt cggtttacaa caaactggcc ggagaaaagg
    11281 tcgcgccaac gctggcgaaa ctcaacatta aaaatatgcc gaaaccgacg gcgcaacgaa
    11341 tcgatctggt cgcacctcag tttaaatata tcgccgctgg cggcggcgtg gtgcaaagca
    11401 ttattgacgc ggcgttaacc cagaagcctt acccgataaa ggcgtggatt atgtcgcggc
    11461 ataatccttt ccagaccgtc acctgtcgtt cggacctggt aaaaaccgtt gagcaactgg
    11521 atctggtggt cagctgcgat gtctatttga gcgagagcgc ggcatatgcc gactatctgc
    11581 tgccggaatg cacctatctc gaacgggacg aagaggtatc cgatatgtcg ggtctgcacc
    11641 cggcttacgc tctgcgccaa caggtcgtag agccgattgg cgaggcgcgt ccgagttggc
    11701 aaatctggaa agaacttggc gagcagttgg gattagggca gtactatccg tggcaggata
    11761 tgcagacgcg ccaactctat cagttgaacg gcgaccatgc cttagcgaag gaactgcgac
    11821 agaaagggta tctcgaatgg ggcgttccgc tgctattacg cgaaccagaa tccgttcgtc
    11881 agtttacggc gcgttacccc ggcgctatcg cgacggacag tgacaacacc tatggcgaac
    11941 agcttcgctt caaatcgccc tccggcaaaa tcgaacttta ttccgcaacc ctggaggaat
    12001 tgctccctgg ctacggcgtt ccgcgcgttc gtgactttgc gctgaaaaaa gagaatgagc
    12061 tttacttcat tcaaggcaag gtggccgtgc ataccaatgg cgcgacgcag tacgtacctt
    12121 tactcagcga gctaatgtgg gataacgcgg tctgggtcca tccgcaaaca gcgcaagaaa
    12181 aaggcattaa gaccggcgat gagatctggc tggaaaatgc cacgggtaaa gagaaaggta
    12241 aggcgctggt gacgcccggt attcgcccgg atacgctttt tgtctatatg ggatttggcg
    12301 ctaaagctgg ggctaaaacg gcggcgacga cacacggtat ccactctggc aatttactgc
    12361 cgcacgtgac gagtccggta tccggtacgg tagtgcatac cgcaggcgtg acgctgagcc
    12421 gggcatgagg gaggagggaa ccatgaatca tttaacgaat cagtacgtca tgctgcatga
    12481 tgaaaaacgt tgtatcggct gccaggcgtg taccgttgcc tgcaaagtgc ttaatgacgt
    12541 accggaggga tttagccgcg tacaggtaca aattcgcgcc cctgaacagg catccaacgc
    12601 actaacccat tttcaatttg tccgcgtctc ctgtcagcac tgtgaaaatg cgccatgtgt
    12661 cagcgtttgt cctaccggag cgtcatatcg tgatgaaaac gggatcgtgc aggtggataa
    12721 atcgcgctgt attggctgcg attattgtgt tgccgcgtgt cctttccatg tgcgctatct
    12781 gaatccgcaa accggcgtcg ccgacaagtg taacttctgt gccgacacgc ggttggcggc
    12841 tggccagtct ccggcgtgcg tatccgtttg cccaacggac gcgctgaaat tcggcagact
    12901 ggatgagagc gagatccagc gctgggtcgg tcagaaagag gtctatcgcc agcaggaagc
    12961 gcgtagcggc gcggtcagtc tgtaccgtcg taaagaagtc catcaggagg gtaaagcatg
    13021 aatactatct ggggagcgga actacattat gcgccagatt attggccgct gtggttaatt
    13081 tacgcaggcg tcgtggtgct gctcatgctt gttgggctgg ttatccatgc gttattgcgc
    13141 cggatgctgg cgccaaaaac ggcgggcggc gaagagcatc gtgactatct ctactcgctg
    13201 gcgattcgcc gttggcattg gggaaatgca ttactgtttg ttttattact gttaagcggt
    13261 ttatttggtc atttttctct cggccctgta gcgctaatgg tacaagtgca tacctggtgt
    13321 ggttttgcct tactggcttt ctgggtcggg tttgtgctga tcaacctcac cacaggtaac
    13381 gggcgtcact atcgggtaaa tttttccgga ctagtgacgc gctgcatacg ccagacccgt
    13441 ttttaccttt ttggcatcat gaaaggggaa gcgcatccgt tcgcggcaac agagcagaat
    13501 aagttcaatc cactgcagca actggcatat ctggcgatta tgtacgcgct ggtaccgctg
    13561 ttaatcatca ccggtttgct gtgtctctat ccgcaggttg cgggtctggg ccctgtgatg
    13621 ctggtgctgc atatggcgct tgctatcatc ggcttactgt ttatttgcgc gcatctctat
    13681 ctgtgtactc ttggcgacac gccgggacaa attttccgta gcatggttga cggctatcat
    13741 cgtcatcgta ccgcgccgcg cggggataag tccgccgtct gagcgtatcc ataaaataaa
    13801 gtcagcaaga aaatgtgcct tgtgtcacat tttcttgcaa tttatccatg tttgtttaac
    13861 tgaacttccg taaaaagaac ggcaaattga gaccatcctg aagacatgct gttgaaacgc
    13921 cgtttgttta ttgccgcttc tttattcgcg atgcaccttt ctcctgcgct tgcggccgat
    13981 gccgtaagtt ttgctcccca accgccagcc attgatgcag gcgcctgggt gttgatggat
    14041 tacactacgg gacaggttct taccgccggt aatgaacacc agcaacgtaa tcccgccagc
    14101 cttaccaagc taatgacggg ctacgtcgtc gatcgcgcca tcgatagtca tcgtatcagc
    14161 cctgacgata tcgtcaccgt tgggcgcgac gcctgggcga aggataatcc ggtgtttgtc
    14221 ggctcctcgt tgatgttttt aaaagaaggg gatcgcgtgt cggtacgcga tttaagccgt
    14281 ggcttaattg tggattccgg taacgatgcc tgtgtggcgc tggcggatta tatcgcgggc
    14341 gggcagccgc agtttgtggc gatgatgaac agctatgtga aaaaactcaa tttgcaggat
    14401 acccattttg aaaccgtcca cggtctggat gcgccgggac aacatagctc cgcgtatgat
    14461 ctggccgtac tctcccgggc gattattcac ggcgaacctg aattttatca catgtacagc
    14521 gagaaaagcc tgacctggaa cggcatcaca cagcagaacc gcaacggctt gttatgggat
    14581 aagaccatgc atatcgatgg gcttaaaacc ggacacacat cgggggcggg atttaatctt
    14641 atcgcatcgg cggtggacgg gcagcgtcga cttatcgccg tcgtgatggg agcgaaaagt
    14701 tcgaaaggac gcgaggaaca ggcgcgaaaa ctgttgcagt ggggccagca aaactttgcg
    14761 acggtgcaga ttttgcacag cggcaaaaaa gtgggcagcg agcggatctg gtacggagac
    14821 aaagaaaaga ttgcgctggg tacggaacag gatttctgaa tggcgctgcc caaagcggaa
    14881 attccgcata tcaaagcaaa atatgtgctg gatagaaaag agctggaggc gccaatcgcc
    14941 gcccatcaac gggtaggtga aatagagctc tacgatcggg ataaactgat cgctcagtgg
    15001 ccgctggtca ctctggaatc ggtgggtaaa ggcggtatgt tctctcgtct gagcgactat
    15061 tttcagcata aagcgtaagc cgttgtcaca caccgttcac cgtcatctga ggtgtcaaaa
    15121 gggcgggatt gcgaggttgc tcacaaaatg atcacgctgt ccttgtgacc gtaaaaggct
    15181 gtaattatac tgtacattaa tacagtatag taaagtgacg gaggcagcat ggattacgaa
    15241 atcaggcagg aacaaaaacg caagatagcc ggtttccaca tggtcggtcc atgggaacac
    15301 accgtgaagc agggttttga acaactgatg acgtgggtgg atcgacagcg gatcgtgcca
    15361 gttgaatgga ttgccgtcta ttacgacaat ccagatgtcg tacctgcaga aaaactccgc
    15421 tgcgataccg tggtgtccgt ggcagagaat ttcatcctgc cggacaatag cgaaggcgta
    15481 atcgtgaccg ccattgaagg cggcgaatat gccactgctg tcgcgcgagt ggaagaccgt
    15541 gactttgcga agccgtggga acggtttttt gatgtcctcg agcaggatag cgcttatcag
    15601 atagcctctg cgccctgttt tgaaacctat ctgaataacg gcatggaaga tggatactgg
    15661 gatattgaaa tgtatattcc ggtacagcgg aagtgatcga ctggtttcct ggctgaaaag
    15721 agcggacgga taatgtgttc cgtccgccag tgcgctattt ttgctataaa gcaggtacaa
    15781 tgcatttttt gccattcccg taaggagcgc aagcgtgcgt gccgataagt cattaagccc
    15841 ttttgaaata cggttgtacc gtcattatcg catcgtgcat ggcatacgta tcgccctggc
    15901 gttcattctt acctttctgc tggttcgtct gttttctatt cccgagggca catggccgct
    15961 aatcacgtta gtggtgatta tggggcccat ctcattctgg ggaaatgtag tgcctcgtgc
    16021 ttttgagcgc ataggcggta cgattctggg cgcggcgtta gggctggtgg cgctacgcct
    16081 ggagctcttt tccttaccgc tgatgctggt gtggtgtgcg atagcgatgt ttttgtgcgg
    16141 ctggctggcc ttagggaaaa aaccgtatca ggcgctactg ataggcataa cgctcgccgt
    16201 tgttgtcggc gctcccgctg gtgatatgaa tacggcatta tggcgtggcg gggatgtgat
    16261 tttgggggcg ctactggcaa tgttgtttac cggcatctgg ccccagcgcg cctttttgca
    16321 ctggcgcatc caactggcgc attgcgtcac ggcgtataat cgggtgtatc aggcagcgct
    16381 gtcgccgaat ttgctggagc gcccccggtt ggataaatat ttgcaacggt tgctgaacga
    16441 tgtcgtcaaa atgcgcgggc tgataacgcc agccagtaaa gaaacccgga tacaaaaatc
    16501 tattttcgag gccattcaga ccatcaaccg caatctggtt tgtatgcttg aattacaaat
    16561 caatgcccac tgggcgacgc gcgccagcca ttttgtgatg cttaacacgc acacattgcg
    16621 tgaaacccag cagatgacgc agcaaacctt gctaacgatc gcccacgcgt tgtttgaagg
    16681 caacccgcag ccggtactag caaataccgg taaactgaat gatattgctg ccgagttgcg
    16741 acagctaatg aacgagcagc agggcgacgc ggtggctgaa acccccatcc acggctatgt
    16801 ttggctaagt atggaaacgg cccgacagtt ggaactgctt tcacacttga tctgccgggc
    16861 tttgcgcaaa taaaaagcag atggggtgaa tgaatttgtt gctgcttcga ttcagcaaag
    16921 attaagagta tgatactaat ataaggataa aatgagtgct actggcaacg attttatccc
    16981 cgaaccttca ggtttcccca gacggcgacg taacggtgtt tcttctggcg gcttgaagta
    17041 tgacggggat aaacgtaatg tttatccact agcagttgct taacgaatcc gaatctcaca
    17101 ttatcagggg tgtaaaaatg gaaacaacca agccttcttt ccaggacgtg ctggagtttg
    17161 ttcgtctgtt ccgtcgcaaa aataaactgc agcgtgaaat tcaggacatt gagaagaaga
    17221 tccgtgacaa ccagaagcgt gtgctgctgc tggacaacct gagcgactac atcaagccag
    17281 gtatgagcgt tgaggcgatt cagggtatca tcgccagtat gaaaagcgac tatgaagatc
    17341 gcgttgatga ctacatcatt aaaaatgccg aaatctccaa agagcgtcgc gacatttcca
    17401 aaaagctgaa agcgatgggc gaaatgaaac acgccgatgt aaaagccgaa taatgcgcta
    17461 cggcagtggg agcgtatatc aggctctcac tgcagtttga ccccgcctgt gaccatcttg
    17521 agtaaatgtt gttttggcca gtgtcgggta agttttttct ctgccagctt acctttcaga
    17581 cgcgcaatat catgacgttt ccggtccagc atcagaccca ccacgctacc gctatgcgcc
    17641 acgttcaatc cgtataaatc acactcttcg accagcgaca gcagggcggt aaagcccgac
    17701 ttaggtaaca gcgtctggct ggcgatagcg ctaagcgtag ccgcctcacc cagtcggagc
    17761 ggattttgcg ttatacaggc ttcctgcacc agattccagg cctgctgcaa ggttggtgaa
    17821 cttgctatta atttctgctg gcgagggaga cggtggtaat cttgcgtgcg cagtgtgacc
    17881 gggctttcca gtaccagcaa atcgattggc ggcggtggct cgcaggcgat ttgcgtggcc
    17941 gcattattat gatcaaacag cgttaactga tgaaaaacgg tgctatcagt gggttcgatt
    18001 gagacgcaaa gctgtgcaag ggtggtttca tccagcgaat ggccaagatg atgcgccgtt
    18061 gccaccgccg tagcggcaat atctgcggtg ctgctggcca tgcctttggc aacgggaatt
    18121 gacgaacgca catcgacgcg aatctcgtta ctccagtgcg caggatactg ccagtgcgcc
    18181 agaacgcgct ccaccatcgc ccgcgacaat ggacgctcgt ttaccaacgg cggcgcagcc
    18241 gtgactgcta cggtgctgta ccagtcaacg gggcaggaga ccagtttctc actgcccaga
    18301 atccatccct ggataagttc cccgcatgag gcggggcatt gcgcaacagc cacgttatca
    18361 cctttcaggt acgaatagtg tgcgcgcata gtgtcatggt aaaagcgtta ttaccatgac
    18421 ttgccgcaat gcgtcgtata cccctctcag gctggtacac aaagcccttc cgtggccggt
    18481 agcgcaatgc gcataacgtc ttgtgcgatc attaactctt cgttggtgtt gatgacggcg
    18541 actttcacca gggcgttctc cgtctggata aatgttgcat tacgttgatt tttctcttca
    18601 tcaacggcta agcctaaaaa ttgcaaatta tggcaaaccg ccgatctggc gcgcgctgag
    18661 ttctcgccaa ttcccccagt gaataccaga gcatccagtc ctcccatttg cataatatag
    18721 ccaccaatgg tggcgcgaat gcgttcggca aacagcgtga gagcgagttt agcctgccgg
    18781 ttaccggtat tggctgcctg ttcgacatcg cggtaatcag acgacacgcc agaaacgccc
    18841 agcaagcctg actcattatt taataactga ttcaactgtt gcggcgtttt gcattcgcgc
    18901 tgggctatcc acggcagaat agagggatca atatctccgc tacgggtgcc catcatcacg
    18961 cctgactgcg gcgtaaagcc catcgacgta ttgaccgaac gtccgttctt gatggcgcag
    19021 acgctgctac cgtttccaag atgacaacaa atcacccgta atgcgctgag tggtacgccc
    19081 agcttttcag ccagaacgcc gctgacatac ttatggctgg tgccatgaaa gccataacgg
    19141 cgaatcccca gttcagcgta ataatgccag ggaagcgggt aaatataggc gggttcatcc
    19201 agcgtctggt gaaatgccgt atcaaacacg gctacagaag gggcatcagg caacagttga
    19261 cgaaaaacgt gaatacccaa cgcgtttacc gggttgtgaa gcggggccag ttcagcaaga
    19321 cgttcgattt gcgctaacgt ttcatccgtg accagcgtcg agtctttaaa aaactcaccg
    19381 ccgtgcgcca cacgatggcc caccccgtca atgtcccgca gactgttaat gatttgataa
    19441 cccagcagct tttccagaag cagcgttacc gcatcgcgat gatcggcaac ggggacggtt
    19501 tcctgccatt tttggctgtg cgtcttaatt gtcacctgcg catccgccat accgatacgc
    19561 tcaatcagcc cctggcagag catgtcgccc tgcggcatct ccagcagctg gaactttaac
    19621 gatgagctgc cggcgttaat ggccattatt ttgtaagaca taaaggttcc ttcgaattca
    19681 gaaaatccag cacggcgtcg agacccgaat tattcaacgc gctggtaata aaaatctgcc
    19741 gggcgccagc ctgcgtaagc cattgtgcga ccagcgaaat acgctgcggg tcggcgagat
    19801 cggctttggt gacaaggcca atcgtcgggc ggttcatcgg gacggtaaaa cccggagaaa
    19861 acggcgacca ctgagcgtcg gcatttaaca ccagggcgat aacgtcggcc tcgcaggcgc
    19921 tggtcagcag ggcgctgtac aggcagcggt tctccaggta ttcgcccggc gtgtcgatag
    19981 ccatcggcga ccattcaatg gcctgggttt tcttgtaatg gagcgcttcg ccacgcaggc
    20041 tttgggtcag cgaagttttc ccgcactggc tggggccgat aaacatcaga cgcttcattg
    20101 gattacgtcc gggtgatcga gcaggtagtg aactgcatca tctcgcccag ggtgcgcgtt
    20161 acctgcttga gggcatattc cacggcggaa acatcgccgg tcagcaccac agcaccggta
    20221 aagcggtcaa gaaaaccaat ctccaccgcg ccggattttg tagcaatatc gcaggcgata
    20281 atcgacgctt cgctgggcgt gatggtgagg atgccaatgg cggaaaccgc atcctgcagg
    20341 cccagcttct taaataaatc tttccccgga ttagcaatca ggtgcgcgag ggtcacctgt
    20401 ttccccggca cgtattcctg aatcatgcga tccgttgtcg gttgtctttc cattatccct
    20461 ccaccatctg tcgccacatg gcttcatgcg agcgtgggat caccgaacgg taaaccagca
    20521 gccctttttc gcccgcgctt tcgctggcga ccgtcacggc gttattgacg tcagaaacgt
    20581 cgcccgccac caccatgtag catttaccgc cgatgccgaa ggccatatgc acccgcacca
    20641 gggtgacgtt tgagcctttc accgcccggt ctgcggcgct aatgcaggcc gccacgctcc
    20701 aggtttcgac gatgccgacc gcctgacgct tatcgacgct gttcaggccg ctgatggccg
    20761 gaagtacgct gggatgaata tttgccagca ccaggctgtc gacgagcatc tcgccggcct
    20821 gcgacgtacc ggtttcaatg gcctgctgga tagcgccgat atcgccgccc agcatcagta
    20881 aaaacttact tgggcagatg gtcttgctga ccagtagatc gacgttggcg cttttcagca
    20941 tggcatcacc aagctccatg cctttggcga tgctggtgag ttctaaaatt cctatagcct
    21001 gagacatggt taacctctta caacagtgat ggcctgttcg ctgatggccg aaacaatgcc
    21061 gtcgatgctg gcgtgaatgg atgcgccgag cgcgccaggc gggacatcgg caacgcattg
    21121 cccgcgagtc acgcgctcgc cgacggcaac agtcggtact gcgctggcac caatatgctg
    21181 gcgcagctgc aaagtgactt tttctactga cggctcttct tcaaccagcg gcgcttcctg
    21241 gtaccagggg cttagtccca gtttggcgat cagccgcttc accggcacca ggcgatattt
    21301 cgccatttcg tcggccggat tcagcggccc ttcgtagcgc tggttttgcg cccgcagctc
    21361 gcgttttaac atgcggttga tgcgcatcgg cgagatcccg accgggcagg ccacgctttc
    21421 gcaaacgttg cattccgagc aggtaagggc gctcagcagc agttgcggcg tggcagcctg
    21481 atgaaagttc accgcccgca ccagcaggtg cggagagagt tcgtggccga tcagatgtcg
    21541 tgggcagaga tcggtacaga gtcggcactg ttcgcagacg gtgcgcgcga cggaaagcac
    21601 tgtgcgctcg tcctgcatcc tgcgctggat aagcggatgg ctttttggga gcaccagcag
    21661 gccgccggta gttttcgtca ccgggttatc aagagaggta atcaggccac ccatcatcgg
    21721 gccgccgtta ataaaaccgg ggttgtcgac cgtcgcgccg ccagccagcg ccagcacttc
    21781 atgcagtgac atgccgacag gaacggtaac ggtcaacggt ctggcgaccg cgccgttcac
    21841 ggtcaacgtg cgacgagtga ccggaaactg ctgctcgac
//
LOCUS       DAGWFR010000061        21801 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.062, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000061 DAGWFR010000000
VERSION     DAGWFR010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 21801)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21801)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21801
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.062"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..803)
                     /gene="mak"
                     /locus_tag="MOX77_002325"
     CDS             complement(<1..803)
                     /gene="mak"
                     /locus_tag="MOX77_002325"
                     /EC_number="2.7.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructokinase"
                     /protein_id="HCA3357841.1"
                     /translation="MRIGIDLGGTKTEVIALDDAGEQRFRHRLPTPREDYQQTIETIA
                     TLVDMAEQATGQTGSVGIGIPGSLSPYTGVVKNANSTWLNGQPFDSDVSRRLKREVRL
                     ANDANCLAVSEAVDGAAAGAQTVFAVIIGTGCGAGVALNGRAHIGGNGTAGEWGHNPL
                     PWMDDDELRYREEIPCYCGKQGCIETFISGTGFATDYQRLSGKTLKGDEIIRLVDAQD
                     AVAELAISRYELRLAKALSHVVNILDPDVIVLGGGMSNVERLYKTVPSL"
     gene            929..1840
                     /gene="rdgC"
                     /locus_tag="MOX77_002326"
     CDS             929..1840
                     /gene="rdgC"
                     /locus_tag="MOX77_002326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-associated protein RdgC"
                     /protein_id="HCA3357842.1"
                     /translation="MLWFKNLMVYRLSRDITLRAEEMEKQLASMTFTPCGSQDMAKMG
                     WVPPMGSHSDALTHTANGQIIICARKEEKILPSPVIKQALEAKIQKLEADQGRKLKKT
                     EKDSLKDEVLHSLLPRAFSRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGS
                     LPVVPLALENPIELTLTEWVRSGTVAQGFQLLDEAELKAMLEDGGVIRAKKQDLVSDE
                     IAVHIEAGKVVTKLALDWQQRIQFVMCDDGSIKRLKFCDELRDQNEDIDREDFAQRFD
                     ADFILMTGELAALIQSLVEGLGGEAQR"
     gene            complement(1878..2162)
                     /gene="ppnP"
                     /locus_tag="MOX77_002327"
     CDS             complement(1878..2162)
                     /gene="ppnP"
                     /locus_tag="MOX77_002327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine/purine nucleoside phosphorylase"
                     /protein_id="HCA3357843.1"
                     /translation="MLQSNEYFSGKVKSIGFTSSSTGRASVGVMAEGEYTFGTAEPEE
                     MTVVSGALKVLLPGTVEWKVYTAGEVFNVPGHSEFHLQVAEPTSYLCRYL"
     gene            complement(2233..2917)
                     /locus_tag="MOX77_002328"
                     /pseudo
     CDS             complement(2233..2917)
                     /locus_tag="MOX77_002328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459385.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AroM family protein"
     gene            complement(3168..3359)
                     /gene="yaiA"
                     /locus_tag="MOX77_002329"
     CDS             complement(3168..3359)
                     /gene="yaiA"
                     /locus_tag="MOX77_002329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YaiA"
                     /protein_id="HCA3357844.1"
                     /translation="MPTRPPYPREAYIVTIEKGTPGQTVTWYQLRADHPKPDSLISEH
                     PTAEEAMDAKKRYEDPDKS"
     gene            complement(3386..3931)
                     /gene="aroL"
                     /locus_tag="MOX77_002330"
     CDS             complement(3386..3931)
                     /gene="aroL"
                     /locus_tag="MOX77_002330"
                     /EC_number="2.7.1.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase AroL"
                     /protein_id="HCA3357845.1"
                     /translation="MMQPLYLVGPRGCGKTTIGMALAQATGFRFADTDRWLQSHVQMS
                     VADIVEKEGWGGFRARETAALEAVSAPSTVVATGGGIILTEYNRRYMHRVGVVIYLCA
                     PVSTLVNRLEAEPEADLRPTLTGKPLSEEVREVLEQRDALYRETAHYIIDATKAPAQV
                     VSEIIAALPPSTQRLQGDVYT"
     gene            complement(4116..4571)
                     /locus_tag="MOX77_002331"
     CDS             complement(4116..4571)
                     /locus_tag="MOX77_002331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaiI/YqxD family protein"
                     /protein_id="HCA3357846.1"
                     /translation="MTIWVDADACPNVIKEILYRAAERMQLPLILVANQALRVPPSRF
                     IRTLRVAAGFDVADNEIVRQCEAGDLVITADIPLAAEVLEKGAAALNPRGERYSDATI
                     RERLTMRDFMDTLRASGVQTGGPNTLSPRDRQHFAAELDKWWLESQRKK"
     gene            4711..5520
                     /gene="proC"
                     /locus_tag="MOX77_002332"
     CDS             4711..5520
                     /gene="proC"
                     /locus_tag="MOX77_002332"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HCA3357847.1"
                     /translation="MEKKIGFIGCGNMGKAILGGLIASGQVLPGQIWVYTPSPDKVAA
                     LHDQYGINAAQSAQEVAQVADIVFGAVKPGIMVKVLSEISSSLNKDSLVVSIAAGVTL
                     DQLARALGHDRKIIRAMPNTPSLVNAGMTSVTPNALVTPEDTADVLNIFRCFGEAEVI
                     AEPMIHPVVGVSGSSPAYVFMFIEAMADAAVLGGMPRAQAYKFAAQAVMGSAKIVLET
                     GKHPGELKDMVCSPGGTTIEAVRVLEERGFRAAVIEAMTKCMEKSEALSKS"
     gene            complement(5535..6647)
                     /gene="adrA"
                     /locus_tag="MOX77_002333"
                     /gene_synonym="dgcC"
     CDS             complement(5535..6647)
                     /gene="adrA"
                     /locus_tag="MOX77_002333"
                     /gene_synonym="dgcC"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase AdrA"
                     /protein_id="HCA3357848.1"
                     /translation="MFPKIMNDENFYRKAVEQAVAPPDPSDDRQRSGLRFARRIRLPR
                     AVGLGGMLLPVAAVLVSQPVFGGWWLLLVGWSFVWPHLAWQWAAKALDPLRQEIYNLK
                     VDAILSGMWIALMGVNMLPAAALFMMMSMNLMGAGGRRLFTVGMGLLLASCLVTLQLT
                     GLPVAMRSSSLEVTLSLPVIMLYPLLFAWVSYQTAIKLAEHKRRLQAMSSRDGMTGVY
                     NRRHWEILLRNEFDHSRRHHREATLLIIDIDHFKSINDTWGHDAGDEAIIALTRQLQI
                     TLRGSDIIGRFGGDEFAVIMCGTPADSAITAMSRVHERLNTLRLPGAPQVMLRISVGV
                     APLTPQIGHYREWLKSADMALYKAKNAGRNRTEVAA"
     gene            complement(6739..7059)
                     /gene="psiF"
                     /locus_tag="MOX77_002334"
     CDS             complement(6739..7059)
                     /gene="psiF"
                     /locus_tag="MOX77_002334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate starvation-inducible protein PsiF"
                     /protein_id="HCA3357849.1"
                     /translation="MKITLLVTLLFGLVFLTAVGATEKPLTPQQQRMTTCNQQATAQA
                     LKGDARKTYLSDCLKNSQSAPGEKSLTPQQQKMRECNVQATEQSLKGDDRSKFMSACL
                     KKAA"
     gene            complement(7411..7671)
                     /gene="iraP"
                     /locus_tag="MOX77_002335"
     CDS             complement(7411..7671)
                     /gene="iraP"
                     /locus_tag="MOX77_002335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001748986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-adapter protein IraP"
                     /protein_id="HCA3357850.1"
                     /translation="MKNLIAELLLKLAQKEEESKELVAQVEALEIIVTAMLRNMAQNE
                     QEMLIRQVEGALEGVKPDASVPDHDTELLRQYVKKLLRHPRH"
     gene            complement(7968..9167)
                     /locus_tag="MOX77_002336"
     CDS             complement(7968..9167)
                     /locus_tag="MOX77_002336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter"
                     /protein_id="HCA3357851.1"
                     /translation="MESWKVNLISVWFGCFFTGLAISQILPFLPLYISQLGVSSHEAL
                     SMWSGLTFSITFLISAIVSPMWGSLADRKGRKLMLLRASLGMAIAILLQAFATHVWQL
                     FLLRGIMGLTSGYIPNAMALVASQVPRERSGWALSTLSTAQISGVIGGPLMGGFVADH
                     IGLRAVFLITAMLLVVSFLVTLFLIKEGVRPVIKKSERLSGKAVFASLPYPALVISLF
                     FTTMVIQLCNGSISPILALFIKSMMPDSNNIAFLSGLIASVPGISAPRLGKLGDRIGT
                     ERILMATLICAVLLFFAMSWVTTPFQLGLLRFLLGFADGAMLPAVQTLLVKYSSDQIT
                     GRIFGYNQSFMYLGNVVGPLMGATVSAMAGFRWVFIATAAIVLINIGQLTLALRHRRN
                     AQKAKGQ"
     gene            complement(9336..10049)
                     /locus_tag="MOX77_002337"
     CDS             complement(9336..10049)
                     /locus_tag="MOX77_002337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extensin family protein"
                     /protein_id="HCA3357852.1"
                     /translation="MFMGCENGGRVRGKGFLIIVLLGGIGGLGYRYLPSYYNPFAPLQ
                     LADPPGWITTFKLQRLTPSQCRELLTAANQQGLISSQPVADSAGECPLSHVVRVRDFG
                     QVKLSSSFLASCPLALRSALFVEQQAKPLTETWMQRRLTRIEHLGSYACRNIYHRPDA
                     RRSEHASAEALDVSGFQLSDGRKITVLRGWGREETGPWLRAMLNASCHYYGNGLGPDY
                     NAAHANHFHLGMRGYGVCR"
     gene            10127..11221
                     /gene="ddlA"
                     /locus_tag="MOX77_002338"
     CDS             10127..11221
                     /gene="ddlA"
                     /locus_tag="MOX77_002338"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HCA3357853.1"
                     /translation="MAKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFDVVLLGID
                     KAGQWHVNDAENYLQNADDPAHIALRPSAISLAQVPGKHQHQLINAQNGQPLPTVDVI
                     FPIVHGTLGEDGSLQGMLRVANLPFVGSDVLSSAACMDKDVAKRLLRDAGLNIAPFIT
                     LTRTNRHAFSFAEVESRLGLPLFVKPANQGSSVGVSKVANEAQYQQAVALAFEFDHKV
                     VVEQGIKGREIECAVLGNDNPQASTCGEIVLNSEFYAYDTKYIDDNGAQVVVPAQIPS
                     EVNDKIRAIAIQAYQTLGCAGMARVDVFLTADNEVVINEINTLPGFTNISMYPKLWQA
                     SGLGYTDLISRLIELALERHTANNALKTTM"
     gene            complement(11247..11462)
                     /locus_tag="MOX77_002339"
     CDS             complement(11247..11462)
                     /locus_tag="MOX77_002339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2754 family protein"
                     /protein_id="HCA3357854.1"
                     /translation="MRLPVKIRRDWHYYAFSIGLIFILNGVVGLLGFEAKGWQTYGVG
                     LVTWIISFWLAGFIIRRREDDEVKDAR"
     gene            11730..12038
                     /locus_tag="MOX77_002340"
     CDS             11730..12038
                     /locus_tag="MOX77_002340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaiY family protein"
                     /protein_id="HCA3357855.1"
                     /translation="MADFTLSKSLFSGKHRETSSTPGNIAYAIFVLFCFWAGAQLLNL
                     LVHAPGIYEHLMQVQDTGRPRVEIGLGVGTIFGLVPFLTGCLIFAVIAAFLRWRHRHQ
                     "
     gene            complement(12076..13170)
                     /gene="yaiW"
                     /locus_tag="MOX77_002341"
     CDS             complement(12076..13170)
                     /gene="yaiW"
                     /locus_tag="MOX77_002341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="surface-exposed outer membrane lipoprotein YaiW"
                     /protein_id="HCA3357856.1"
                     /translation="MSAASRLYPLPFLAVAILAGCSSQSGQPVSKGEKPVDVASVVRQ
                     KMPASVKDREAWAKDIATTFKSQGLAPTVENICSVLAVAQQESGYQADPVVPGLSKIA
                     WQEIDRRAERLHIPLFLVHTALKINSPNGKSYSERLDTVKTEKQLSAIFDDFINMVPM
                     GQTLFGSYNPVHTGGPMQVSIAFAEQHAKGYPWNMAGTVRQEVFTRRGGLWFGTYHLL
                     NYPANYSAPVFRFADFNAGWYASRNAAFQNAVSKASGVKLALDGDLIRYNSKEPGKTE
                     LAVRKLAGQLGMSEREIRSQLEKGDNLAFEKTALYKKVYKLAEAKTGKTLAREMLPGI
                     QLESPKITRKLTTAWFAKRVDERRARCMGR"
     gene            complement(13185..14405)
                     /gene="sbmA"
                     /locus_tag="MOX77_002342"
     CDS             complement(13185..14405)
                     /gene="sbmA"
                     /locus_tag="MOX77_002342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide antibiotic transporter SbmA"
                     /protein_id="HCA3357857.1"
                     /translation="MFKSFFPKPGPFFMSAFVWALIAVIFWQAGGGDWVARLVGASDE
                     VPISAARFWLLDYLIFYAYYLICVGLFATFWFIYSPHRWQYWSILGTSLIIFVTWFLV
                     EVGVAVNAWYAPFYDLIQTALNSPHKVTLGQFYHEVGVFLGIALIAVVIGVLNNFFVS
                     HYVFRWRTAMNEHYMAHWQYLRHIEGAAQRVQEDTMRFASTLENMGVSFINAIMTLIA
                     FLPVLVTLSAHVPNLPIVGHIPYGLVIAAIVWSLMGTGLLAVVGIKLSGLEFKNQRVE
                     AAYRKELVYGEDDASRATPPTVRELFSAVRHNYFRLYFHYMYFNIARILYLQVDNVFG
                     LFLLFPSIVAGTITLGLMTQITNVFGQVRGSFQYLINSWTTLVELMSIYKRLRSFERQ
                     LDGQPVQEVTHSFS"
     gene            14741..15898
                     /gene="ampH"
                     /locus_tag="MOX77_002343"
     CDS             14741..15898
                     /gene="ampH"
                     /locus_tag="MOX77_002343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine-
                     carboxypeptidase/endopeptidase AmpH"
                     /protein_id="HCA3357858.1"
                     /translation="MKRSLLFTAMLFAASLTSVQAAQPIADPVFASDIVDRYAEHIFY
                     GSGATGMALVVIDGNQRVFRSFGDTRPGNNVRPQLDSVIRIASLTKLMTSEMLVKLLD
                     QGTVKLNDPLSKYAPPGAHVPTYQGTPITLVNLATHTSALPREQPGGAAHRPVFVWPT
                     REQRWNWLSTATLKVAPGSQAAYSNLAFDLLADALATASGKPYTQLFEEKITRPLGMK
                     DTTFTPSPDQCKRLMVAEKGASPCNNTLAAIGSGGVYSTPGDMMRWMQQYLSSDFYHR
                     SHQADRMQTLIYQRAQLKKIIGMDVPGKADALGLGWVYMAPKDGRPGIIQKTGGGGGF
                     ITYMAMIPQYNIGAFVVVTRSPLTRFTNMSDGINDLVTELSGNKPIAIPAS"
     gene            complement(15943..16566)
                     /gene="iprA"
                     /locus_tag="MOX77_002344"
     CDS             complement(15943..16566)
                     /gene="iprA"
                     /locus_tag="MOX77_002344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogen peroxide resistance inhibitor IprA"
                     /protein_id="HCA3357859.1"
                     /translation="MLSLNKPLQEFNRLDKCLSKHGTRFEFVNDKEIICSPDESNTHT
                     FVILEGVVSLVRGDKVLIGIVQAPFIFGLADGVAKKEAQYKLIAESGCIGYRLSSSQT
                     LAIIEQNQLWREAFCWIVWKSQVLELRDKQLIGNNSYDQIRATLMTMIEWDEELRSRI
                     GVMNYIHQRTRVSRSVVAEVLAALRKGNYIEMNKGKLISINRLPSEY"
     gene            complement(16652..19537)
                     /locus_tag="MOX77_002345"
     CDS             complement(16652..19537)
                     /locus_tag="MOX77_002345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HCA3357860.1"
                     /translation="MHSWKKKLVVSQLALACTLAITSQANATTYDTFGYHDDAATVFG
                     WDDTNDHDYLTYGGYVYNTPASDSGYFDTKFTGDTVNGVISTYYLNHDYANDTANTLD
                     VTNSTIHGMITSYQMGYGQYVWTNGSDYTTHDWVDDDTFNLNISNSTIDDDFEAFYFT
                     DTYLDSDGKTVKTDYDKLVTAGLGTAITLDVESNINITNNSHVAGIALYQNDLGNSTY
                     TTEAHQWDNTINVANSTVTSGSWSEDEEQGHFGNSSEPSDYNGNGWNKDDVALAFVDD
                     PYSNYRMVNNVTFTDSQLLGDVVLESSWNYNFYSNGRLVDDSTTVYTNGGWADDDQNV
                     DHLTLTLNNTKWVGAAVNDSQSMDPVQFYDVDANSLDPDSTNYDAWGRVNSAASFQSG
                     IFDVSLNNGSEWDTTKTSVIDTLAVNSGSQVDVANGSNLTADTITLNGGSAMNIGEGG
                     YVDTDHLTVDTFSTVTLADDVSSAWSDDALYANTITVTHGGMLDIQTNNTNADSVIDT
                     DTLELTSSNVADNNGNVYAGVFNIHSNDYTLNADLVNDRTWDTTQANYGYGVVAMNSD
                     GHLTINGNGDINNGDEADASSTTDNVVAATGNYKVRIDNATGAGSVADYKGNELIYVN
                     DINTDATFSAANKADLGAYTYQAKQEGNTVVLEQMELTDYANMALSIPSANTNIWNLE
                     QDTVGTRLTNARHGLADNGGAWVSYFGGNFNGDNGTINYDQDVNGIMVGVDTKVDGNN
                     AKWIVGAAAGFAKGDLSDRTGQVDQDSQSAYIYSSARFANNIFVDGNLSYSHFNNDLS
                     ANMSDGTYVDGNTSSDAWGFGLKLGYDLKLGDAGYVTPYGSVSGLFQSGDDYQLSNDM
                     KVDGQSYDSMRYELGVDAGYTFTYSEDQALTPYFKLAYVYDDSNNDADVNGDSIDNGV
                     EGFAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWSANVGVKYTW"
     gene            20050..21024
                     /gene="hemB"
                     /locus_tag="MOX77_002346"
     CDS             20050..21024
                     /gene="hemB"
                     /locus_tag="MOX77_002346"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HCA3357861.1"
                     /translation="MTDLIHRPRRLRKSAALRAMFEETTLSLNDLVLPIFVEEELDDY
                     KAIDAMPGVMRIPEKQLAREIERIANAGIRSVMTFGISHHTDDTGSDTWKEDGLVARM
                     SRICKQTVPEMIVMSDTCFCEYTSHGHCGVLCEHGVDNDATLANLGKQAVIAAAAGAD
                     FIAPSAAMDGQVQAIRQALDAAGFTDTAIMSYSTKFASSFYGPFREAAGTALKGDRKT
                     YQMNPMNRREAIRESLLDEAQGADCLMVKPAGAYLDVLREIRERTELPLGAYQVSGEY
                     AMIKFAAMAGAIDEEKVVLESLGSIKRAGADLIFSYFALDLAEKNILR"
     gene            complement(21128..>21801)
                     /locus_tag="MOX77_002347"
     CDS             complement(21128..>21801)
                     /locus_tag="MOX77_002347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HCA3357862.1"
                     /translation="PSRLGSPGVPMYGYNVQLLNEVTGEPCGINEKGMLVIEGPLPPG
                     CIQTIWGDDARFVKTYWSLFNRQVYATFDWGIRDAEGYYFILGRTDDVINIAGHRLGT
                     REIEESISGYPNVAEVAVVGIKDALKGQVAVAFVIPKQSDTLADREAARDEEKAIMAL
                     VDNQIGHFGRPAHVWFVSQLPKTRSGKMLRRTIQAICEGRDPGDLTTIDDPASLQQIR
                     QAIEE"
BASE COUNT         5555 a         5792 c         5230 g         5224 t
ORIGIN      
        1 atcagcgacg gaaccgtttt gtacaggcgc tcaacattgc tcataccgcc gcccagcaca
       61 atgacatccg gatccagaat attcacgaca tgagataatg ccttcgccag ccgtagctca
      121 taacggctta tcgccagttc cgccacggcg tcctgcgcgt cgaccagacg aataatctca
      181 tcgcctttta gcgttttacc gctcaaacgc tggtaatccg tggcgaatcc cgtaccggaa
      241 ataaaggttt cgatacagcc ttgtttaccg caataacagg gaatttcttc gcggtaacgc
      301 aactcatcgt catccatcca cggcaacgga ttgtggcccc attcgcctgc cgtaccgttg
      361 ccgccgatgt gcgcccggcc atttagcgct acgcccgcgc cgcacccggt accgataatc
      421 accgcaaata ccgtttgcgc ccccgccgcc gcgccatcta ccgcctctga taccgccagg
      481 caattggcat cgttggctaa ccgcacttca cgcttcagac gacggctcac atcgctatcg
      541 aacggctggc cgttaagcca cgtagagtta gcgtttttta ccacgccggt gtaaggcgag
      601 agagaaccgg gaatgccaat gccaacgcta ccggtctggc cggtcgcctg ttccgccatg
      661 tcgaccagcg tagcgatggt ttctatcgtt tgctgataat cctcccgcgg cgtaggcaga
      721 cgatggcgaa accgctgctc tcctgcatca tcaagcgcaa tgacttccgt ttttgtgccg
      781 cctaaatcga taccaatacg cacataccgc tcctcatttt ttgggaatat caacagggta
      841 gaattcaccg ttctgattgg caatgcaagc ctgccgacaa ttcgttacta taccgactgg
      901 atttaacgac aaggccgtgg aaattatcat gctgtggttc aaaaatttaa tggtttaccg
      961 tcttagccgc gatatcacat tacgcgccga agagatggag aaacagctcg cctcaatgac
     1021 gtttacccca tgcggtagcc aggatatggc caaaatgggc tgggttccgc cgatgggctc
     1081 tcacagcgat gcgttaacgc acaccgccaa tggccaaatt attatttgcg cgcgcaaaga
     1141 agagaaaatc ctgccatcgc cagtgatcaa acaggcactg gaggcgaaaa tccagaaact
     1201 ggaagccgat cagggacgca agctgaagaa gacggaaaaa gattccctga aggatgaagt
     1261 gttgcattcg ttgctgccgc gcgcgtttag ccgcttcagt cagacaatga tgtggattga
     1321 taccgttaac ggcctgatta tggttgactg cgccagcgcg aaaaaagcgg aagatacttt
     1381 ggcgctactg cgtaaaagtc ttggctcgct gccggtcgtc ccgctggcgc tggaaaatcc
     1441 gattgagctg acgctcaccg agtgggtgcg ctccggtacg gtcgctcagg gtttccagtt
     1501 gctggacgaa gccgaattga aagcgatgct ggaagatggc ggcgtgatcc gcgcgaaaaa
     1561 gcaggatctg gtcagcgacg agatcgccgt tcatattgaa gcgggtaaag tggtcacgaa
     1621 gctggcgctc gactggcagc agcgtattca attcgtcatg tgcgacgacg gctccattaa
     1681 gcgtctgaaa ttctgcgatg agctgcgcga tcagaacgaa gatatcgacc gggaagattt
     1741 tgcccaacgt tttgatgcgg actttatcct gatgaccggc gagctggcgg cgctgattca
     1801 aagcctggtg gaaggattag gcggcgaagc gcagcgctaa ccagagggtc cctctccgcc
     1861 ggagagggga ctcaccgtta caaatagcgg cacagatacg aggtgggctc agcgacctgt
     1921 agatgaaact cgctgtggcc aggcacgtta aacacctcac cggctgtata cactttccat
     1981 tcgacagttc ccggcaacag taccttcaac gcgccgctca caaccgtcat ctcttcgggt
     2041 tcggcggtgc caaatgtata ctccccttcc gccatcacac caacgctggc ccggccggtg
     2101 ctactgctgg taaatccaat agacttcact ttcccggaaa agtattcatt gctttgtagc
     2161 ataatcaggc cccgtctcat tattaaatta acacccaata tagagtcctg acgttcggcc
     2221 tgtcacgtaa aattagacaa gcagttctga agctaaccgc gcaatcaaaa cattagagag
     2281 taaaaccggc acatccagcg cctgctgtaa aatatcccga tgacgctgat gaaaacccag
     2341 acaatccagc ataatgacgt ccgcgccttg atccagtagc gcctgcccgg catcaattaa
     2401 ctgttgctca gaaccgtgaa ccggattcgc cagcgaatac accggcggca tttgcaatac
     2461 ctgccatttt ttctcctggg ccgccagaag ttctgcaaca ggcacaatcg cgcccacctg
     2521 atgtccatcc acaatagagg cgacaagcgg tggaataata cgcagcggtt caagcaaaat
     2581 agaattacgg gctgccgtac ttttaatcgc cgcggtgctc atcagtataa tgacatcgta
     2641 accctgatta tccagcacct cgacaacgct ctgtaaatct cgctccactt tctggcggga
     2701 aacatgggct atctggttat cattcagcaa cgtcaaaagc agatcgtcgc caggctctac
     2761 agcgtaatcc gccataacgt cttcccggct catttttccc agcaggctat gatgggttat
     2821 gggttatgtg ttgttcgtcg atgtattccg tcagaagcgg taacacttcg ctcattggca
     2881 caacgccgat tgtgaggatt gccaacgacg cactcatttt tattccacct tattacttcg
     2941 tcgtaattcc cgggcaaata ttcacacgct caccgcgcta cctgccctac aaatctcaga
     3001 aagcgtagca gcagatgagc aacgtattgt gtaaagattc caaataactc caatattgta
     3061 ttgttatcgc ttaatttatg gttttagttg ccagtataaa tgtttcaaga atgtgatgga
     3121 gatacaattt aggggtactc agaatccctt ccgagtggtt catgcgtcta tgatttatcc
     3181 ggatcttcgt aacgtttttt cgcatccatc gcttcttctg cggtcggatg ctcgctgatg
     3241 agcgaatcag gtttcggatg gtcagcccgt agctgatacc acgtcaccgt ctggcccggc
     3301 gtgccttttt caatggtgac gatataagct tcccgcggat aaggtggtct ggttggcata
     3361 gcgtttcctt tattctgggt gagcgttaag tatagacatc tccctgtaac cgttgcgtcg
     3421 acggcggcag cgccgcaata atttcagaaa cgacctgggc cggcgctttc gtcgcgtcaa
     3481 taatgtaatg cgccgtttcg cgatacaacg cgtcacgctg ctcaagcact tcccgaacct
     3541 cttcgctcaa cggcttgccg gtgagggtcg ggcgcagatc cgcttcaggt tcagcctcaa
     3601 gccggttaac cagcgtggat accggcgcgc acagataaat cactacgcca acacggtgca
     3661 tataacgtcg gttatactcc gtgagaataa taccgcctcc cgtcgccacg acagtcgaag
     3721 gcgcgcttac cgcctccagg gccgcggttt cccgggcgcg gaaccctccc cagccttctt
     3781 tttcaacgat atcagcgacg ctcatctgca cgtgcgattg cagccagcgg tcggtatctg
     3841 caaaccgaaa accggttgcc tgcgccagcg ccataccgat ggtggttttc ccacagcccc
     3901 gcgggccaac aagataaaga ggttgcatca tagcaggcgt tcccccagga actgcgcata
     3961 cgcaggattt gatatcagta atgttataat catatcatct aactagtaca acgcataaat
     4021 gtaaataata atttacacaa aggtactaaa gtcacaatat tagtactata gcaagaatca
     4081 gaaatgaata aactgtaaat ttttcattac atgatttatt ttttacgctg gctttccagc
     4141 caccacttat ccagctcggc ggcaaaatgc tgacgatcgc gcggcgagag agtgtttggt
     4201 ccccccgttt gtacgccgct ggcgcgtagc gtgtccataa agtcacgcat cgtcagacgt
     4261 tcgcgaatcg tggcgtcgct atagcgttct ccccggggat taagagccgc agcgcctttt
     4321 tccagcactt cagccgccag cggaatatcc gcggtaatca ccagatcgcc cgcttcgcat
     4381 tgacgcacaa tttcattgtc cgccacgtca aacccggcgg ccacgcgaag cgtgcggata
     4441 aaacgcgaag gcggcacgcg caaggcctga ttggcaacca gaataagcgg caactgcatc
     4501 cgctcggcgg cgcggtacaa aatttcttta atgacattcg gacacgcatc cgcatccacc
     4561 cagatggtca taatgtctcc cgtacggtat acaatctttt attgtctcgc gcttttgtct
     4621 ttcatcaaag tgctgtttct ccttctgccc gttttcaatc cgcgttaagc taaccattcc
     4681 ccataacaca caaacatagg gagtgacgag atggagaaga aaatcggttt tattggctgc
     4741 ggtaatatgg gcaaggctat tcttggcgga ctgattgcca gcggtcaggt acttcccggc
     4801 cagatctggg tctacacccc ctcccccgat aaagttgccg ccctgcatga tcagtacggc
     4861 attaatgcgg cgcaaagcgc gcaggaggtc gctcaggtcg cggatatcgt tttcggcgcg
     4921 gtaaaaccgg gcattatggt gaaagtgctc agtgaaatct cctccagcct gaacaaagac
     4981 tcgctggtgg tctctatcgc cgcaggcgta acgcttgatc agcttgcgcg cgcgctggga
     5041 cacgaccgta aaatcattcg cgctatgccg aatacgccgt cgctggtcaa cgcaggaatg
     5101 acctccgtca cgcccaacgc gctggtcaca ccggaagata cggctgatgt gctgaatatt
     5161 ttccgctgct ttggcgaggc ggaagtgatt gctgagccga tgatccatcc ggtggttggc
     5221 gtgagcggat cttcgccggc ctatgtcttt atgtttatcg aggcgatggc ggacgctgcc
     5281 gttctgggcg gtatgcctcg cgctcaggct tataaattcg ccgcgcaggc cgtcatgggg
     5341 tcggcgaaaa tagtactcga aaccggaaag catcccggcg aactgaaaga tatggtgtgc
     5401 tcgcctggcg gaacgacgat tgaagccgta cgcgttctgg aagaacgtgg cttccgcgct
     5461 gcggtaatag aagcgatgac gaaatgtatg gaaaaatcag aggcgctcag taaatcctga
     5521 agcccggctg gacgtcatgc cgccacttcg gtgcggttac gtccggcatt ctttgctttg
     5581 taaagcgcca tatccgcaga ctttaaccat tcccgataat gaccgatttg tggcgttaac
     5641 ggcgccacgc ccacgctgat acgtaacatg acctgcggcg cgcccggcaa gcgtaaggta
     5701 tttagccgtt catgcactcg cgacatggcg gtaatcgcgc tgtctgccgg cgttccgcac
     5761 ataatcaccg caaattcgtc gccgccaaag cgcccgataa tatcactccc gcgtagcgtt
     5821 atctgtaatt gacgcgtcag ggcgataata gcctcatccc cagcatcatg tccccaggtg
     5881 tcgttaatgc tcttaaaatg atcgatatcg ataatcaaca atgtcgcctc ccgatggtgg
     5941 cgtcggctgt gatcgaattc attacgtaat aaaatttccc agtggcgtcg gttatagacg
     6001 ccggtcatgc catcccgcga actcatcgcc tgcaagcgtc gcttatgttc cgctaattta
     6061 atggccgttt gataacttac ccaggcgaac agaagcggat acaacataat gacgggcaaa
     6121 gagagcgtga cttccagcga cgagcttcgc atcgcgacgg gtagcccggt aagctgcaac
     6181 gtcaccagac atgacgccag caaaaggccc attccgacag tgaatagccg ccgcccgcca
     6241 gcgcccatca gattcatgct catcatcata aacagcgcgg cggcaggcaa catattgacg
     6301 cccatcaacg cgatccacat gccggagagg atcgcatcca ctttcaggtt gtaaatttcc
     6361 tggcgtagcg gatcaagggc tttcgccgcc cactgccacg ccagatgcgg ccagacaaaa
     6421 gaccagccga ccagcaataa ccaccagccg ccaaagacag gttgcgacac taacacggcg
     6481 gccaccggta aaagcatccc ccctaacccc accgcgcgcg gtagcctgat gcgccgggcg
     6541 aagcgcaatc cggagcgctg acgatcatca gaagggtcag gcggcgctac cgcctgctca
     6601 accgcttttc ggtaaaaatt ttcatcattc attatttttg ggaacattta gaaacaattt
     6661 tcccaaatta tagaaacaga gcgcatggag ggagtatgaa atttcgggtg agtgtttttc
     6721 agggctcacc cgatagcact acgccgcttt tttcaggcag gcgctcataa acttgctacg
     6781 gtcatcgcct ttcagtgatt gttccgtcgc ctgaacattg cattcacgca ttttctgctg
     6841 ttgcggcgtc aggcttttct cgccaggggc tgactggctg tttttcaggc agtcgctaag
     6901 gtaggtttta cgcgcatcgc ctttcaacgc ttgcgctgtc gcctgctgat tacaggtcgt
     6961 catgcgctgc tgttgcggcg ttaacggttt ctcggttgcg ccgacggcgg ttaaaaagac
     7021 caggccaaaa agtaaagtca ccagtaatgt tattttcata gcaccatcct tttgtcagtg
     7081 tacacattac acgttgtccc tttgggaaat atcccaggga ctttatataa gtctggctgt
     7141 tactggcaaa aataccaccc ggcagtaaaa gtattactta ccgttagcaa tatatgtttt
     7201 attgattgac aaaccgtagg ctaatgtgca actcgattat ccacagtcac actggcagga
     7261 tgcagaagaa cagcgcataa cgttacactg ttattaccat agccgcttcg tttttatttt
     7321 gctctgtatt aaccagaaga aaataaaaac gaagcggcta tgttatttca taaaagtaac
     7381 gttataacaa ctgtgttgtt ttaaatacga ttagtgccgg gggtgtctca gcaacttttt
     7441 tacatattgg cgcagcaatt ccgtatcgtg atcaggaacg ctggcatccg gctttacgcc
     7501 ttcaagtgcc ccctctacct gacgtatcaa catctcctgc tcgttttgcg ccatgttacg
     7561 taacattgct gtgacgataa tctctaacgc ttctacctga gcaaccagtt ctttcgactc
     7621 ttcttctttt tgggctagct taagcaacaa ctctgctatg agatttttca tgaccatatt
     7681 tccttattag ttccagggtg acgttatcac tatgaagaac cactgcctag aggctgaaag
     7741 tactattttt atgatacagg aagaacttta cacaaataat tatcactgtc gccgcagcga
     7801 aacgtttctc agaccgaaaa cgagacgata ataaaccatc aaaaaacaat aatcacgcta
     7861 tatcataatt taaggttatg ccatctatag aaaaacttca cggataaaga gtatatcttt
     7921 taatttaaac catatcgtaa cggcagaagc gccgttacga tgcaccgcta ttggcctttc
     7981 gctttttgcg cgttacgccg atgacgtaac gccagggtca gttgtccaat attgatcaac
     8041 acgatcgccg ccgtagcgat aaaaacccag cggaaaccgg ccatcgccga taccgtcgcg
     8101 cccatcaacg gcccaaccac gttgcccagg tacataaatg actggttgta gccaaaaata
     8161 cgtccggtaa tttgatcgct ggagtatttc accaataacg tttgtacggc gggtaacatc
     8221 gcgccatcgg caaagcctaa caagaaacgt aacagcccca gctggaacgg cgtggtgacc
     8281 caggacatcg cgaagaaaag cagcactgcg cagataagcg tggccatcag aattctttcc
     8341 gtgccgattc tgtcgccaag ttttcccagg cgaggcgcgg agataccggg caccgaggcg
     8401 attaacccgc taagaaaggc gatgttatta ctgtccggca tcattgattt gataaacagc
     8461 gccaggattg gactgatgga accattacag agttgaatga ccatcgtggt aaaaaacaaa
     8521 ctgatcacca gcgcaggata aggtaacgac gcaaaaacgg ctttaccgct caggcgttcg
     8581 cttttcttga tgaccggacg cacgccttct ttaattaaaa atagcgtgac cagaaagctc
     8641 accaccaaca gcatggcggt aatcagaaat accgcccgca gcccgatatg atccgcgaca
     8701 aagccgccca ttaacggccc gccgataacg ccgctgatct gcgcggtaga aagcgtactg
     8761 agcgcccagc cgctacgttc gcgcggtacc tgagaggcta ccagcgccat ggcattgggg
     8821 atatagcctg acgttaaccc catgattccg cgcagcagga aaagttgcca gacatgggtc
     8881 gcgaatgctt gcagtagaat agctatcgcc atcccgagcg acgcgcgcaa tagcatcagt
     8941 ttacgccctt tacgatcggc gagactgccc cacatcggcg atacaatggc ggaaataaga
     9001 aacgtgatgc taaacgttaa cccggaccac attgataacg cttcatggga agagacgcca
     9061 agctgggaaa tatacagggg taaaaatggc aggatttggc tgattgccag cccggtaaaa
     9121 aaacatccaa accaaacgga aattagatta actttccagg attccataag actcgtaacg
     9181 gtaagtagct gaaaatacgc gttagcttag caagctctca ttttcctggt ggttccagag
     9241 gtgcgatacg tcacactttg ctattttgtc tccccgttca tcatttttgt gaaacatatc
     9301 acattatata gccgcgaaag gcagacgttt atgctttaac gacacacgcc gtagccccgc
     9361 attccaagat gaaaatggtt agcatgagca gcgttatagt caggcccgag cccattgcca
     9421 taataatggc aactggcgtt taacatagcg cgtaaccagg gccccgtctc ctcacgcccc
     9481 cagccgcgca ggacagtgat ttttcggcca tctgatagtt gaaacccgct gacatccagc
     9541 gcttctgcgc tggcatgttc actgcgacgc gcatccggac ggtgataaat attacggcag
     9601 gcatagctgc ccagatgttc gatgcgggtc aggcggcgct gcatccacgt ttctgttaaa
     9661 ggttttgcct gctgttcgac aaacagcgcg gaacgcagcg ccaacgggca ggaggctaaa
     9721 aaactgctgc tcagttttac ctggccaaaa tctctgacgc gcacaacatg ggacaaggga
     9781 cattcaccag cgctatccgc aacaggttgt gatgaaatta atccctgttg attggccgcc
     9841 gtcaacagct cccggcactg cgacggcgtc aggcgctgta gtttgaaggt agtgatccag
     9901 cctggcggat cggcaagttg tagcggagca aaaggattat aataagaggg aagataacga
     9961 tatcccagcc cgccaatacc gcccaacagc acaataatca gaaaaccctt acctctcacg
    10021 cggcctccgt tctcacatcc cataaacatt atggcagaag cccgcgaaac ccgcgttttg
    10081 tcgtggtaat gtatacgctt tgcattcgat ggaatgggtt tttaagatgg cgaaattgcg
    10141 ggtaggaata gtatttggcg gtaagtcggc ggaacatgaa gtgtctttgc aatcagcgaa
    10201 aaatatcgtt gatgcgatcg ataaaacccg cttcgacgtg gtgctgttag ggatagataa
    10261 ggcgggacaa tggcatgtta acgatgcgga aaattatttg cagaatgcag acgatccggc
    10321 acatatcgcg ctacgtcctt cggcaatcag tctggcccag gtgcctggca aacaccaaca
    10381 ccaattgatt aacgctcaga acgggcagcc gctaccgacg gtagatgtta tttttcctat
    10441 cgtccacggt acgctgggcg aagacggctc attgcagggg atgctgcgcg tcgcaaactt
    10501 accgtttgtc ggttcagacg tgctgagctc cgcagcctgc atggataaag acgtcgccaa
    10561 acgactgcta cgcgatgcag gactgaatat cgccccgttt attacactca cccgaacgaa
    10621 tcgtcacgcg tttagttttg ccgaggttga atcccgtctg ggactgccgc tgttcgttaa
    10681 gcccgccaat cagggctctt cggtcggcgt cagtaaagtc gctaacgaag cgcaatatca
    10741 gcaggcggtc gcgctggctt tcgaattcga tcataaagtg gtggtggagc aagggatcaa
    10801 agggcgcgag atcgaatgcg ccgtattagg taacgataac ccacaggcca gtacctgcgg
    10861 cgaaatcgta ctgaacagcg aattttacgc ctacgatact aagtatattg atgataatgg
    10921 cgcgcaagtt gtcgtgcctg cgcagatccc ttccgaggtg aatgacaaga tccgcgcgat
    10981 cgcgatccag gcttatcaga cgctggggtg cgcgggtatg gcgcgtgtcg atgtcttctt
    11041 aacggcagac aatgaggtcg tgattaacga gattaatacg ctgccaggtt ttaccaatat
    11101 cagtatgtat ccaaaactct ggcaggcgag cggattgggc tataccgatt tgatcagccg
    11161 cctgattgag ctggcgctgg aacgccatac ggcgaataac gccttaaaaa ccacgatgta
    11221 atagcgcacg cccgatagcg caacgtttat cgggcgtctt ttacctcatc atcttcgcgc
    11281 cggcgaatga tgaaccccgc cagccagaag ctgataatcc acgttaccag cccaacgcca
    11341 taggtttgcc atcctttcgc ctcaaaaccc agcaatccta cgacgccatt caaaataaag
    11401 ataaggccaa tagagaaggc atagtagtgc cagtcacgac gaatttttac aggcaaacgc
    11461 ataacgactc cgacgtatta acagcaacaa aaacgtattt ttgcatactt ctggcgagcg
    11521 agtctgtggg ggatacggaa tttcttaaat gttaattgat tttgataaaa gtgatcgttt
    11581 tgtgacaact aacaaaaatt tacgcgatgg atacattcca tatgtgaaat taccatgatt
    11641 ctgatattga caaacacaat gacctgtcag acttcacagt aagccgatgg cataacgcca
    11701 gatcgtagcc gatcatcctg gaggtcttta tggctgattt cactctctca aaatcgctgt
    11761 tcagcgggaa gcatcgagaa acctcctcta cgcccggaaa tattgcttac gccatatttg
    11821 tactgttttg cttctgggcc ggagcgcaac tcttaaacct gctggttcat gcgccgggta
    11881 tctatgagca tctgatgcag gtacaggata caggtcgacc acgggtagag attgggctgg
    11941 gcgtcgggac gatttttggc ctggtgccct tcctcacggg ctgcctcatt tttgccgtta
    12001 tcgccgcgtt tttacgctgg cgtcaccgtc accaataaac cttagcgcgc tggagaaaat
    12061 atcccagcgc gaaatttatc gccccataca ccgcgcccgc cgctcatcaa ctcgtttagc
    12121 aaaccaggcg gtcgtcagct tacgcgtgat cttcggactt tccagttgaa taccgggcaa
    12181 catttcccgc gcaagcgtct tgcccgtttt ggcctcggcc agcttataga ctttcttgta
    12241 gagcgccgtt ttttcaaacg ccaggttatc gcctttctcc agttggctgc gaatttcacg
    12301 ctcactcatt cccaactgcc ctgccagttt gcgcaccgct aactctgttt tgcccggttc
    12361 cttgctgtta taacgaatca gatcgccatc cagcgccagt tttaccccac tggctttact
    12421 gacggcattc tggaacgcag cgttacggct ggcgtaccat cccgcgttga agtcggcgaa
    12481 gcggaaaaca ggcgcgctgt agttcgccgg gtaattcagc aaatggtagg ttccaaacca
    12541 caatccgcca cggcgcgtaa agacctcctg acgtaccgta cccgccatat tccacggata
    12601 acctttcgcg tgctgttcgg caaaggcaat gctgacctgc atcgggccgc ccgtatgcac
    12661 cgggttatat gagccaaata gcgtctgccc catagggacc atattgataa agtcgtcaaa
    12721 aatagcgcta agctgttttt cggtttttac cgtgtccagg cgttcgctat agctcttgcc
    12781 gttgggggag ttaattttca gcgcggtgtg caccagaaac agcggaatgt gtagtcgttc
    12841 agcgcggcga tcaatctcct gccaggcgat tttacttagc cccggcacga caggatccgc
    12901 ctgataaccg gactcctgct gggcgacagc cagcaccgaa cagatatttt ctaccgtcgg
    12961 cgccagcccc tggctcttaa acgttgtcgc gatatctttc gcccaggcct ctctgtcttt
    13021 gacactggcc ggcattttct gacgtactac gcttgccacg tcgacaggct tctcgccctt
    13081 gctcaccggc tgcccggatt gactactaca gccagccaat atggcgaccg ccagaaaagg
    13141 cagaggataa agacgggacg ccgccgacat aacgtttcct tctgttagct aaaagagtgg
    13201 gtcacttcct gaactggctg accatccaac tggcgttcaa agctacgtaa acgtttataa
    13261 atagacatca gctccaccag agtcgtccag gagttaatca aatactggaa cgaaccgcgc
    13321 acctgaccaa acacgttggt gatttgcgtc atcagcccca gcgtaatcgt accggcaaca
    13381 atggaaggaa acagcaggaa caaaccgaaa acgttatcga cctgcaaata gagaatgcgc
    13441 gcgatgttga aatacatata gtgaaagtag agacggaagt agttatggcg caccgcgcta
    13501 aacagttcac ggacggtggg cggcgtggcg cggctggcgt catcttcacc gtagaccagc
    13561 tctttacgat aagctgcctc cactcgctga tttttaaatt ccagccccga caatttgatc
    13621 ccgacgaccg ccagcaggcc cgtccccatt aatgaccaga ctatggcggc aatgaccagg
    13681 ccgtaaggga tatgtcctac gatgggtaaa ttcggcacat gcgctgacag ggtgaccaac
    13741 accggcagaa aggcgataag cgtcatgatg gcattgataa aactcacgcc catgttctcc
    13801 agtgtagagg caaaacgcat ggtatcttcc tgcacacgct gggcggcccc ttcgatatgg
    13861 cgcaggtact gccagtgcgc catatagtgc tcattcattg cggtacgcca gcgaaataca
    13921 tagtggctga caaagaagtt gttcagcacg ccgatcacca cggcgataag cgcaataccg
    13981 agaaacaccc ccacttcatg ataaaattga ccaagagtga ccttgtgcgg cgagttgagc
    14041 gccgtttgaa tcaaatcata gaatggcgcg taccaggcgt taaccgcgac gccaacctcc
    14101 accaaaaacc aggtgacaaa aataatgagc gaggtgccaa gtatcgacca gtactgccag
    14161 cggtgcgggc tatagatgaa ccagaacgtt gcaaataatc ccacgcaaat caggtaataa
    14221 gcataaaaaa tcagatagtc cagcaaccag aagcgcgctg cgctgatagg cacttcatcg
    14281 gatgccccta caagtcgcgc cacccaatct cctcctcccg cctgccagaa aatgacagcg
    14341 atcagcgccc aaacaaacgc cgacatgaaa aacggccctg gctttgggaa aaaagattta
    14401 aacatcatgc tctcctgcta acttcttatc tttattacgg ctgctgtgac ggcggcaata
    14461 gcacgccatg cccacggcta aaccaggcat tgtgacctac gttgtgacgc ttagttcgca
    14521 tttctgctca acagaattgt ttcgacgagt ttcatactca gcaggcacgc tgacgctatc
    14581 aggttatcac aagcgcttta tcacaaaagt aaacattctc catcacgaaa acccgccgtt
    14641 acgttttttc acccactttt ttctctttaa cgttttgcaa tgtgccgccg ggtagtataa
    14701 atacgcataa ccaccgttat ttcacttatg gacatcaccg ttgaaacgta gtctgctttt
    14761 tactgccatg ctgtttgcgg catcacttac ttctgtccag gcggctcagc cgattgccga
    14821 tccggttttt gcctctgata tcgttgatcg ttatgccgag catatctttt atggtagcgg
    14881 cgccacgggc atggcgctgg tggtgatcga cggcaatcaa cgcgtgtttc gtagtttcgg
    14941 tgacaccaga ccgggcaata atgttcgtcc acagcttgac tcggtcattc gtatcgcttc
    15001 tctcaccaag ctcatgacca gtgaaatgtt ggtaaaattg ctcgatcagg gaacggtaaa
    15061 attaaacgat ccgctcagca aatatgcgcc tcccggcgcg catgtcccga cgtatcaagg
    15121 cacgccgatt acgttggtca acttagcgac ccacaccagc gcgcttccgc gagaacagcc
    15181 cggcggcgcg gcgcatcgtc cggtatttgt ctggccaacc cgcgaacaac gctggaactg
    15241 gctctccaca gcaacgttaa aagtcgcgcc cggttcacag gcggcctatt ccaatctggc
    15301 gttcgacctg ttagccgacg cgctggcgac cgcctccggc aaaccttata cgcaactgtt
    15361 tgaagaaaag attacccgcc cgctgggaat gaaagacacc acgtttaccc cctctcccga
    15421 tcagtgtaag cgtctgatgg tggcagagaa aggcgcaagc ccctgtaata atacgctggc
    15481 tgccattggc agcggcggag tctattctac gccaggagat atgatgcgct ggatgcaaca
    15541 gtatctgtcg tcagatttct atcaccgtag ccatcaggcc gatcgtatgc aaacgttgat
    15601 ttatcagcgc gcacagttaa agaaaatcat cgggatggac gtaccgggta aagccgacgc
    15661 gctcggtctg ggctgggtct atatggcgcc aaaagacgga cgtcctggca ttatccagaa
    15721 aacgggaggc ggcggcggtt ttattaccta tatggcgatg atcccacaat ataatattgg
    15781 cgcttttgtg gtcgtaaccc gttcccccct cacccgtttt accaatatga gcgacgggat
    15841 taacgatttg gttactgagc taagcggcaa taaaccgatt gctattcctg catcctgagt
    15901 cgtcgcgcct cgcgctatat cagacgaggc gcgacatttt tgttaatatt cggagggcaa
    15961 acggttaata ctgatcaatt tgcctttatt catttcaatg taattaccct tacgcagggc
    16021 cgcgagaact tccgccacca ccgatcgcga tacgcgcgtt cgttgatgta tataattcat
    16081 aacaccaata cgtgagcgaa gttcttcatc ccactcaatc attgtcatta acgtcgcacg
    16141 aatctggtcg taagaattat taccaatgag ctgcttgtca cgaagctcca gtacctgact
    16201 tttccatact atccaacaga aggcttcacg ccacagttgg ttctgctcaa tgatggcgag
    16261 agtttgtgat gatgagaggc gataaccgat gcaaccgctc tccgcaatta atttatattg
    16321 tgcctctttt ttcgccacgc catcggctaa gccaaaaata aaaggggcct gcacaatacc
    16381 aataagaact ttatcacccc gaactaacga aacaaccccc tctaaaataa caaaggtatg
    16441 ggtattactt tcatcaggtg aacagataat ctctttatcg ttaacaaact cgaaacgcgt
    16501 accatgctta gaaaggcatt tatcgagtct gttgaattcc tgtagtggct tgtttaaaga
    16561 taacatatgc attccttgca ataatgcccg tcaagtcctt gacgggcatt tttcagttta
    16621 aattactttt atttctcctg agagaaaatg attaccaggt atatttaaca ccaacgtttg
    16681 cagaccagtc ttgatcaaca tcaccgccgc cgaggtagtt agcatcggtg taggcgctga
    16741 agttcttcgt gaagctgaac tgagtaccca gaccaacacg taccgcaaaa ccttctacgc
    16801 cgttgtcgat agagtcgccg tttacgtcag catcgttgtt ggagtcgtcg taaacgtaag
    16861 ccagtttgaa gtacggggtc agcgcctgat cttcgctgta agtgaaggta taacctgcat
    16921 ctacaccgag ttcataacgc atgctgtcgt aagactgacc gtcaactttc atgtcgttgc
    16981 tcagctggta gtcgtcgccg gactggaaca gaccggatac gctgccgtaa ggcgttacgt
    17041 agcctgcatc acccagcttc agatcataac ccagtttcaa gccgaagccc caggcgtcag
    17101 aagaggtgtt gccgtcaacg taagtaccgt cgctcatgtt agcagacaaa tcgttgttga
    17161 agtgagagta gcttaagtta ccgtcaacaa agatgttgtt tgcgaaacga gcggaagagt
    17221 agatgtaggc agactggctg tcctgatcca cctgaccggt acgatcgctc agatcgcctt
    17281 tcgcgaagcc tgctgccgca ccaacgatcc acttagcgtt gttaccgtca actttggtat
    17341 caacaccgac catgatgcca ttaacatcct gatcgtagtt aatggtgccg ttgtcgccgt
    17401 tgaagttacc gccgaagtag cttacccatg cgccgccgtt atccgccagg ccatgacgag
    17461 cgttggtcag acgagtacca acggtgtctt gttccaggtt ccagatattg gtgttcgcag
    17521 aaggaatgct cagcgccatg ttagcgtagt cggtcagttc catctgttcc agcacgacag
    17581 tgttgccttc ctgcttagcc tgataggtgt aagcacccag gtcagctttg tttgctgcag
    17641 agaaggtagc gtcggtgttt atgtcattga cataaatcag ctcgttacct ttgtaatccg
    17701 caacagaacc ggcaccagta gcgttgtcga tgcgcacttt ataattacca gtggccgcta
    17761 caacgttgtc agtggtgcta cttgcatcag cctcgtcacc attgttgata tcgccgttac
    17821 cgttgatagt cagatgacca tcagagttca tcgcgacaac gccgtaaccg tagttagcct
    17881 gagtggtatc ccaggtacgg tcgttcacca aatcggcatt tagggtatag tcattgctat
    17941 gaatgttgaa cacaccagca taaacattgc cattattatc cgcaacgtta ctgctagtca
    18001 gttctaacgt atcagtatca atgacgctat ctgcgtttgt attgttggtt tgaatatcta
    18061 acataccacc gtgagttacg gtaatagtat tagcatacag tgcatcatca ctccatgcac
    18121 tgctgacatc atcagccaaa gtaactgtac tgaaagtatc aacggtcagg tgatcagtat
    18181 caacgtagcc accttccccg atgttcatag ctgaaccacc gtttagagta atggtatcag
    18241 cggttaaatt ggagccatta gcgacatcaa cctgagagcc gctatttact gctaaggtat
    18301 ctattacaga tgtttttgtg gtatcccact cagatccatt attcaagctg acgtcaaaga
    18361 taccgctctg gaaggaagca gcactattaa cacgtcccca ggcatcataa ttagtcgagt
    18421 ctggatctaa gctattggca tcaacatcat agaattgcac tggatccatt gactgtgaat
    18481 cattaaccgc cgcaccaacc catttagtgt tattcagggt caatgtcagg tgatcaacgt
    18541 tttgatcatc atctgcccaa ccaccattcg tatagacagt agtggaatca tcgactaaac
    18601 ggccattaga atagaaatta taattccagg agctctcaag gacgacatcc cccagtaact
    18661 gcgagtcggt aaacgtaacg ttgtttacca tacggtaatt tgaataagga tcgtcaacaa
    18721 aagctaaagc aacatcatct ttattccaac cattgccatt ataatcgctt ggttcacttg
    18781 aattgccaaa atggccttgt tcctcatctt cggaccagga gcctgaagtt acagttgaat
    18841 tcgctacgtt aatagtgtta tcccactgat gtgcttcggt tgtatatgtt gaattgccaa
    18901 gatcattttg gtaaagagca ataccagcca catgagaatt gttagtaata ttaatattac
    18961 tttcaacatc aagggttata gcagtgccta aaccagcagt aaccaatttg tcataatcgg
    19021 ttttgactgt ttttccatca gaatcgagat aggtatcagt gaagtaaaac gcctcaaagt
    19081 catcatcgat tgtagaatta gaaatgttta gattaaaagt atcatcatca acccaatcat
    19141 gggtcgtata atcactaccg ttagtccaaa catattgacc gtagcccatc tggtaagaag
    19201 taatcatacc atgaatggtt gagttggtaa catccaatgt attcgcagta tcattggcgt
    19261 aatcatgatt cagataataa gttgaaataa cgccatttac agtgtcacca gtaaattttg
    19321 tatcaaaata gccgctatca ctagctgggg tgttgtagac ataaccacca taagttagat
    19381 agtcatggtc gttggtatca tcccagccaa aaacagtggc cgcatcgtca tggtacccaa
    19441 aagtatcgta tgtagtagca ttcgcctgag aagtgattgc cagagtgcaa gccaatgcta
    19501 attgtgagac tacaagtttc tttttccagg agtgcatttg tcatccctcc tcagggacgt
    19561 aatatagttg atccatcaat tatcaatgca taaaaacata tagatgttta gcaaggagga
    19621 ttatgcggcg tcattgctaa aaggttcaat tattctttat cctcagtccg gattcggaca
    19681 tgaattaaaa aggcgtaata aaaggaaagt tgataattaa aaagcgttct ttttcatgac
    19741 cttgcaagaa aataaaaaaa caaaatacat ataagataaa tatgaattaa agaaaaacaa
    19801 aataaatatg aataatgtca aaatccacat ttacttaaat gacgatgaaa taaaactaaa
    19861 aacaacgtaa aactaattct tatttaaaat gatatagtgc ctgatgtatt aatcttcggt
    19921 atataaaaga agcgccatgt tctgccgccg ccggggctgc gcctgctacg ttaaggaccg
    19981 ttttcgtaaa acatctgcct gcagattcag gtatactggg ccttcgattc cacaaacatc
    20041 aggcagacca tgacagacct tatccatcgc cctcgccgcc tgcgcaaatc cgctgcgctg
    20101 cgcgctatgt ttgaagagac aacacttagc ctgaacgacc tggtgttgcc gatctttgtt
    20161 gaagaagaac tcgacgatta caaagctatt gatgccatgc ccggcgtaat gcgtatcccg
    20221 gaaaagcagc tggcgcgaga gattgaacgt atcgcaaatg ctggcattcg ttccgttatg
    20281 accttcggca tttctcacca tactgatgac accggcagcg atacctggaa agaagacggc
    20341 ctggtggcaa gaatgtcccg catctgtaag caaaccgtgc cggagatgat cgtcatgtcc
    20401 gacacctgct tctgcgaata cacctcgcac ggccactgcg gcgtgttgtg cgaacacggt
    20461 gtggataacg atgcgacgct ggccaacctc ggcaagcagg ccgttatcgc ggcggcggct
    20521 ggagcagatt ttattgcgcc ctccgcggca atggatggac aagtccaggc tatccgccaa
    20581 gcgctggatg ccgccggttt taccgatacg gcaataatgt cctactccac caagttcgcc
    20641 tcttctttct acggcccctt ccgtgaagca gcgggtaccg cgttaaaagg cgaccgcaag
    20701 acgtatcaaa tgaatccgat gaaccgccgt gaagcgattc gcgaatcact gctcgacgaa
    20761 gcccagggcg cggattgctt aatggtgaaa ccggccggcg cgtatctgga cgtgctgcgt
    20821 gaaattcgcg aacgcacaga gttgccgctt ggcgcttacc aggtgagcgg tgaatacgcc
    20881 atgattaaat ttgctgctat ggctggcgcc atcgatgaag aaaaggtcgt gctggaaagt
    20941 ctgggctcga ttaaacgcgc cggcgccgat ttgattttca gctacttcgc actggatctg
    21001 gctgagaaaa atattctgcg ttaattctgt tacagggcgg cgcgctgccg ccctttcccg
    21061 actttacacc ccactattca gtcgctgagt ctaacccgtt gccggacgcg gcttatccgg
    21121 cttacggcta ttcctcgatc gcctggcgaa tttgctgcaa cgacgcggga tcgtcaatgg
    21181 ttgtcagatc gcccggatca cggccttcgc agatcgcctg gatcgtgcgg cgaagcatct
    21241 ttccggaacg cgttttgggg agctgcgaaa caaaccagac atgcgccgga cgaccaaagt
    21301 gaccgatctg gttatccacc agcgccataa tcgctttttc ctcgtcgcgc gccgcctcgc
    21361 gatccgccag cgtatcgctc tgcttcggaa tgacaaacgc caccgccacc tgccctttca
    21421 gagcgtcttt tatccccacc accgccactt ccgctacgtt cgggtaaccg gagatacttt
    21481 cttctatttc tcgcgtcccc agccgatgac ccgcaatatt aatcacatca tcggtacggc
    21541 ccagaataaa gtaatacccc tcggcgtcgc ggattcccca gtcgaaagtg gcataaacct
    21601 gacggttaaa cagcgaccag taagtcttca caaaacgcgc atcgtcgccc caaatagtct
    21661 gaatacaacc cggcggcagc ggcccttcga tcaccagcat gcctttttca tttatgccgc
    21721 agggttcgcc ggtgacttca ttgagtagct ggacgttata accgtacatc ggcaccccgg
    21781 gacttcccag acgcgacggc c
//
LOCUS       DAGWFR010000062        21675 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.063, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000062 DAGWFR010000000
VERSION     DAGWFR010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 21675)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21675)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21675
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.063"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..396
                     /locus_tag="MOX77_002348"
     CDS             <1..396
                     /locus_tag="MOX77_002348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha,alpha-trehalase"
                     /protein_id="HCA3357863.1"
                     /translation="PGGLATTSVKSGQQWDAPNGWAPLQWVAAEGLQNYGQDDVAMEV
                     TWRFLTNVQHTYDREKKLVEKYDVSSTGTGGGGGEYPLQDGFGWSNGVTLKMLDLICP
                     QEKPCDSVPSTRPASLSATPTKTPSAATQ"
     gene            complement(459..713)
                     /locus_tag="MOX77_002349"
     CDS             complement(459..713)
                     /locus_tag="MOX77_002349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HCA3357864.1"
                     /translation="MGIIAWIVFGLIAGVIAKLLMPGRDGGGFILTCILGIVGAVVGG
                     WLATMFGIGGSISGFNLHSFLVAVVGAIVVLVIFRLLRRG"
     gene            882..1616
                     /gene="ycgR"
                     /locus_tag="MOX77_002350"
     CDS             882..1616
                     /gene="ycgR"
                     /locus_tag="MOX77_002350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar brake protein YcgR"
                     /protein_id="HCA3357865.1"
                     /translation="MSGYNEQFLKKNPLAILGVLRDLNKNQVPLRISWAHGQFISKIL
                     AVAPEKLIVDYGSQEYKNSAVLRAGQVAIIAETQGAKVEFTLPQLVTGEYQRLPAFIT
                     PLPSSLWFVQRREYFRIGAPLYPPYYGVTTLPDTRTLRFRLFDLSLGGMGALLESAIP
                     DGLIEGARFSQVELNMGPWGILHVDAQLLAISERKVIDGKNETITTPRLSFRFLNVSP
                     AVERELQRIIFSLERDARERANKVRE"
     gene            complement(1630..2241)
                     /gene="emtA"
                     /locus_tag="MOX77_002351"
     CDS             complement(1630..2241)
                     /gene="emtA"
                     /locus_tag="MOX77_002351"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane-bound lytic murein transglycosylase
                     EmtA"
                     /protein_id="HCA3357866.1"
                     /translation="MKLRWFAFLVVILAGCSSKQDYRNPPWNAEVPVKRAMQWMPISE
                     KAGAAWGVDPHLITAIIAIESGGNPNAVSKSNAIGLMQLKASTSGRDVYRRMGWRGEP
                     TTSELKNPERNISMGAAYLSILENGPLAGIKDPQVMQYALVVSYANGAGALLRTFSSD
                     RKKAIEKINDLDADEFFEHVVDNHPAPQAPRYIWKLQQALDAM"
     gene            2412..3326
                     /gene="ldcA"
                     /locus_tag="MOX77_002352"
     CDS             2412..3326
                     /gene="ldcA"
                     /locus_tag="MOX77_002352"
                     /EC_number="3.4.17.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="muramoyltetrapeptide carboxypeptidase"
                     /protein_id="HCA3357867.1"
                     /translation="MSLFHLIAPSGYCINQQAALRGVQRLTDAGHQVENDEVIRRRYQ
                     RFAGTDAERLADVNSLASLTSPDTIVMPVRGGYGASRLLDRIDWQALASRQQRDPLLI
                     CGHSDFTAIQAGLLAQANVITFSGPMLAANFGAETLNTFTEQHFWLALRKAQFTVEWQ
                     GDGPQCDVQGTLWGGNLAMLISLIGTPWMPTIDKGILVLEDVNEHPFRVERMLLQLEY
                     AGILNRQSAIVLGSFSGAAPNEYDAGYSLESVYAFLRSRLSVPLITGLDFGHEQRTVT
                     LPIGANATLKNTRQGTQLTLSGHPTLQL"
     gene            3423..5156
                     /locus_tag="MOX77_002353"
     CDS             3423..5156
                     /locus_tag="MOX77_002353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium/proton antiporter"
                     /protein_id="HCA3357868.1"
                     /translation="MDAATIISLFILGSILVTSSILLSSFSSRLGIPILVIFLAIGML
                     AGVDGIGGIPFDNYPFAYMVSNLALAIILLDGGMRTQASSFRVALGPALSLATLGVLI
                     TSGLTGMMAAWLFHLDLIEGLLIGAIVGSTDAAAVFSLLGGKGLNERVGSTLEIESGS
                     NDPMAVFLTITLIEMIQKHETGLDWMFAVHIIQQFGLGIVFGLGGGYLLQQMINRISL
                     PSGLYPMLALSGGILIFALTTALEGSGILAVYLCGFLLGNRPIRNRYGILQNFDGLAW
                     LAQIAMFLVLGLLVTPSDLWPIAVPALILSIWMIFFARPLSVFTGLLPFRGFNLRERI
                     FISWVGLRGAVPIILAVFPMMAGLENARLFFNVAFFVVLVSLLLQGTSLSWAAKRAKV
                     VVPPVGWPVSRVGLDIHPDNPWEQFIYQLSADKWCVGAALRDLHMPNETRIAALFRNN
                     ELFHPTGSTRLQEGDVLCVIGRERDLPALGKLFSQSPPVSLDQRFFGDFILEANAKFA
                     DVALIYGLEEGTEYRDKQQTLGEIIQQLLGAAPVVGDQVEFGGMIWTVAEKEDNVVRK
                     IGVRVAEDEAE"
     gene            complement(5218..6288)
                     /gene="dadX"
                     /locus_tag="MOX77_002354"
     CDS             complement(5218..6288)
                     /gene="dadX"
                     /locus_tag="MOX77_002354"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catabolic alanine racemase DadX"
                     /protein_id="HCA3357869.1"
                     /translation="MTRPIQASLDLQVMKQNLAIVRRAAPEARVWSVVKANAYGHGIE
                     RVWSALGATDGFAMLNLEEAITLRERGWKGPILMLEGFFHAQDLEAYDTYRLTTCIHS
                     NWQLKALQNARLNAPLDIYVKVNSGMNRLGFQPERAQTVWQQLRAMRNVGEMTLMSHF
                     AQADHPEGIGEAMRRIALATEGLQCAYSLSNSAATLWHPQAHYDWVRPGIILYGASPS
                     GQWRDIADTGLKPVMTLSSEIIGVQTLSAGERVGYGGGYSVTQEQRIGIVAAGYADGY
                     PRHAPTGTPVLVDGIRTRTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKVDDVAS
                     AAGTLGYGLLCAVAPRVPFVTT"
     gene            complement(6302..7600)
                     /locus_tag="MOX77_002355"
     CDS             complement(6302..7600)
                     /locus_tag="MOX77_002355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-amino acid dehydrogenase"
                     /protein_id="HCA3357870.1"
                     /translation="MRVVILGSGVVGVTSAWYLSQAGHDVTVIDRESGPAQETSAANA
                     GQISPGYAAPWAAPGVPLKAIKWMFQRHAPLAVRLDGTPFQLKWMWQMLRNCDTRHYM
                     ENKGRMVRLAEYSRDCLKTLRAATGIEYEGRQGGTLQLFRTAQQYENATRDIAVLEDA
                     GVPYQLLEASRLAEVEPALAEVAHKLTGGLRLPNDETGDCQLFTQRLARMAEQAGVTF
                     RFNTPVEKLLYENDQIYGVKCADEIIKADAYVMAFGSYSTAMLKGIVDIPVYPLKGYS
                     LTIPIVEPDGAPVSTILDETYKIAITRFDKRIRVGGMAEIVGFNTDLLQPRRETLEMV
                     VRDLFPRGGHIEQATFWTGLRPMTPDGTPVVGRTRYKNLWLNTGHGTLGWTMACGSGQ
                     LLSDILLGRTPAIPYDDLSVARYRSDFTPTRPQRLHSAHN"
     gene            7923..9455
                     /locus_tag="MOX77_002356"
     CDS             7923..9455
                     /locus_tag="MOX77_002356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460760.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SpoVR family protein"
                     /protein_id="HCA3357871.1"
                     /translation="MAMIDSMNKDTTRLSDGPDWTFDLLDVYLAEIDRVAKLYQLDTY
                     PHQIEVITSEQMMDAYSSVGMPINYPHWSFGKKFIETERLYKHGQQGLAYEIVINSNP
                     CIAYLMEENTITMQALVMAHACYGHNSFFKNNYLFRSWTDASSIVDYLIFARNYITRC
                     EERYGVDEVEKLLDSCHALMNYGVDRYKRPQKISLQEEKARQKSREEYLQSQVNMLWR
                     TLPKREEEKTVAEARRFPAEPQENLLYFMEKNAPLLEPWQREILRIVRKVSQYFYPQK
                     QTQVMNEGWATFWHYTILNHLYDEGKVTERFMLEFLHSHTNVVFQPPYNSPWYSGINP
                     YALGFAMFQDIKRICQSPTDEDKYWFPDIAGSDWLETLHFAMRDFKDESFISQFLSPK
                     VMRDFRFFTVLDDDRHNYLEISAIHNEEGYREIRSKLSSQYNLSNLEPNIQVWNVDLR
                     GDRSLTLRYIPHNRAPLDKGRKEVLKHVHRLWGFDVMLEQQNEDGSVELLERCPPRMN
                     TL"
     gene            complement(9502..10221)
                     /gene="fadR"
                     /locus_tag="MOX77_002357"
     CDS             complement(9502..10221)
                     /gene="fadR"
                     /locus_tag="MOX77_002357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid metabolism transcriptional regulator
                     FadR"
                     /protein_id="HCA3357872.1"
                     /translation="MVIKAQSPAGFAEEYIIESIWNNCFPPGTILPAERELSELIGVT
                     RTTLREVLQRLARDGWLTIQHGKPTKVNNFWETSGLNILETLARLDHESVPQLIDNLL
                     SVRTNISTIFIRTALRQHPDKAQEVLATAHEVADHADAFADLDYNIFRGLAFASGNPI
                     YGLILNGMKGLYTRIGRHYFANPEARSLALGFYHKLSSLCEQGAHDQVYETVRRYGHD
                     SGEIWHRMQKNLPGDLAIQGR"
     gene            10441..11985
                     /gene="nhaB"
                     /locus_tag="MOX77_002358"
     CDS             10441..11985
                     /gene="nhaB"
                     /locus_tag="MOX77_002358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)/H(+) antiporter NhaB"
                     /protein_id="HCA3357873.1"
                     /translation="MEISWGRAMWRNFLGQSPDWYKLALLVFLIVNPFIFLANPFVAG
                     WLLVAEFIFTLAMALKCYPLLPGGLLAIEAVIIGMTSAAHVREEVAANLEVLLLLMFM
                     VAGIYFMKQLLLFIFTRLLLSIRSKMVLSLAFCVAAAFLSAFLDALTVVAVVISVAVG
                     FYGIYHRVASSRGEENDMLDDSHIDPHYKTVLEQFRGFLRSLMMHAGVGTALGGVMTM
                     VGEPQNLIIAKAAGWHFGDFFLRMSPVTVPVLVCGLLTCMLVEKMRWFGYGETLPEKV
                     RDVLQQFDDQSRKKRTRQDKIKLIVQAVIGVWLVTALALHLAEVGLIGLSVIILATAL
                     TGVTDEHAIGKAFTESLPFTALLTVFFSIVAVIIDQHLFAPIIQFVLQASEHAQLTLF
                     YLFNGLLSSISDNVFVGTIYINEAKAAMENGAISLKQFELLAVAINTGTNLPSVATPN
                     GQAAFLFLLTSALAPLIRLSYGRMVWMALPYTIVLTLIGLLCVEFTLAPATEWMTQAG
                     WLATLS"
     gene            12127..12657
                     /gene="dsbB"
                     /locus_tag="MOX77_002359"
     CDS             12127..12657
                     /gene="dsbB"
                     /locus_tag="MOX77_002359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein DsbB"
                     /protein_id="HCA3357874.1"
                     /translation="MLRFLNQCSRGRGAWLLMAFTALALEMVALWFQHVMLLKPCVLC
                     IYERCALFGVMGAGLVGAIAPKTPLRYVAMVIWIYSAWRGLQLAYEHTMIQLHPSPFM
                     TCDFMARFPDWLPLGKWLPQVFVASGDCAERQWSFLTLEMPQWLLGIFAAYLVVAIAV
                     VIAQAFKPKKRDLFGR"
     gene            12765..13106
                     /locus_tag="MOX77_002360"
     CDS             12765..13106
                     /locus_tag="MOX77_002360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1971 domain-containing protein"
                     /protein_id="HCA3357875.1"
                     /translation="MSHLRIPANWKVKRSTPFYTKENVPAALLSHHNTAAGVFGQLCV
                     MEGTVTYYGFANETATEPEVKVVINAGQFATSPPQYWHRVELSDDARFNIHFWVEEDH
                     QGEEMYQQKKA"
     gene            complement(13178..13351)
                     /locus_tag="MOX77_002361"
     CDS             complement(13178..13351)
                     /locus_tag="MOX77_002361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="addiction module toxin, GnsA/GnsB family"
                     /protein_id="HCA3357876.1"
                     /translation="MNSEELTHKAEEEIAALISKKVAELRKKTGQEVSEIEFAPRETM
                     KGLEGYHVKIKLL"
     gene            complement(13543..13680)
                     /locus_tag="MOX77_002362"
     CDS             complement(13543..13680)
                     /locus_tag="MOX77_002362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357877.1"
                     /translation="MSERPDLVDPLPEDEPLPGENIPDTPEGDDPLDPDTQNEVEDPR
                     R"
     gene            complement(14032..14478)
                     /locus_tag="MOX77_002363"
     CDS             complement(14032..14478)
                     /locus_tag="MOX77_002363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309703.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcgN family cysteine cluster protein"
                     /protein_id="HCA3357878.1"
                     /translation="MSDTPFWQRKTLDEMTDAEWESLCDGCGQCCLHKLMDEDTDEIY
                     FTNVACRQLNIKTCQCRHYERRFEFEPDCIKLTRENLPDFEWLPMTCAYRLLAEGKPL
                     PTWHPLQTGSKAAMHGERISVRHIAVKESEVRDWQDHILNKPSWAE"
     gene            complement(14571..15230)
                     /locus_tag="MOX77_002364"
     CDS             complement(14571..15230)
                     /locus_tag="MOX77_002364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HCA3357879.1"
                     /translation="MYQHRNWQGALLDYPVSKVVCVGSNYANHIKEMGSATPEEPVLF
                     IKPETALCDIRQPLAIPADMGAVHHEVELAVLIGATLRQATEDHVRKAIAGYGVALDL
                     TLRDIQGKMKKAGQPWEKAKGFDNACPISGFIPVAAFCGDPQNTVIGLNVNGEVRQQG
                     STADMIHPIVPLIAYMSRYFTLKAGDVVLTGTPAGVGPLLSGDELDIRFNGETLSTRV
                     L"
     gene            complement(15280..15573)
                     /locus_tag="MOX77_002365"
     CDS             complement(15280..15573)
                     /locus_tag="MOX77_002365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001667868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcgL domain-containing protein"
                     /protein_id="HCA3357880.1"
                     /translation="MFCVIYRSSKRDQTYLYVEKKDDFSRVPDALMKGFGQPQLAMML
                     PLDGRKKLVNAELEKVKQALSEQGYYLQLPPPPEDLLKQHLSSVGQNTSHADR"
     gene            15699..16406
                     /gene="minC"
                     /locus_tag="MOX77_002366"
     CDS             15699..16406
                     /gene="minC"
                     /locus_tag="MOX77_002366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinC"
                     /protein_id="HCA3357881.1"
                     /translation="MSNTPIELKGSSFTLSVVHLHEAEPEVIRQALEDKIAQAPAFLK
                     HAPVVINVSGLESPVNWPELHKIVTSTGLRIIGVSGCKDASLKVEIDRMGLPLLTEGK
                     EKAVRPAPVEPATPSEPPQNANPITKTRLIDVPVRSGQRIYAPQCDLIVTSHVSAGAE
                     LIADGNIHVYGMMRGRALAGASGDREAQIFCTHLTAELVSIAGVYWLSDKIPAEFYGK
                     AARLRLADNALTVQPLN"
     gene            16430..17242
                     /gene="minD"
                     /locus_tag="MOX77_002367"
     CDS             16430..17242
                     /gene="minD"
                     /locus_tag="MOX77_002367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020801817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinD"
                     /protein_id="HCA3357882.1"
                     /translation="MARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFDIGLR
                     NLDLIMGCERRVVYDFVNVIQGDATLNQALIKDKRTENLFILPASQTRDKDALTREGV
                     AKVLDSLKAMDFEFIVCDSPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGIL
                     ASKSRRAENGEEPIKEYLLLTRYNPGRVNKGDMLSMEDVLEILRIKLVGVIPEDQSVL
                     RASNQGEPVILDATADAGKAYADTVDRLLGEERPFRFIEEEKKGFLKRLFGG"
     gene            17246..17512
                     /gene="minE"
                     /locus_tag="MOX77_002368"
     CDS             17246..17512
                     /gene="minE"
                     /locus_tag="MOX77_002368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division topological specificity factor
                     MinE"
                     /protein_id="HCA3357883.1"
                     /translation="MALLDFFLSRKKSTANIAKERLQIIVAERRRSDAEPHYLPQLRK
                     DILEVICKYVQIDPEMVTVQLEQKDGDISILELNVTLPEAEESK"
     gene            complement(17634..18761)
                     /gene="rnd"
                     /locus_tag="MOX77_002369"
     CDS             complement(17634..18761)
                     /gene="rnd"
                     /locus_tag="MOX77_002369"
                     /EC_number="3.1.13.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease D"
                     /protein_id="HCA3357884.1"
                     /translation="MNYQMIETDDALASLCEAVRACPAIALDTEFVRTRTYYPQLGLI
                     QLFDGANVALIDPLGISDWSPLKAVLRDTGITKFLHAGSEDLEVFLNAFGELPEPLID
                     TQILAAFCGRPLSWGFASMVEEYTGVALDKSESRTDWLARPLSERQCEYAAADVWYLL
                     PIAKKLMIETEAAGWLPAALDECRLMQQRRQEIQAPEEAWRDITNAWQLRTRQLACLQ
                     LLADWRLRKARERDMAVNFVVREENLWAVARYMPGSLGELDSLGLSGSEIRFHGKTLI
                     SLVAKAQALPEEALPEPLLNLMDMPGYRKAFKAIKALVAEVSASHHVSGELLASRRQI
                     NQLLNWHWKLKPQNGQPELISGWRAELMAEKLTLLLQEYSL"
     gene            complement(18834..20519)
                     /gene="fadD"
                     /locus_tag="MOX77_002370"
     CDS             complement(18834..20519)
                     /gene="fadD"
                     /locus_tag="MOX77_002370"
                     /EC_number="6.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain-fatty-acid--CoA ligase FadD"
                     /protein_id="HCA3357885.1"
                     /translation="MKKVWLNRYPADVPAEINPDRYQSLVELFEHAATRYADQPAFVN
                     MGEVMTFRKLEERSRAFAAYLQQGLGLKKGDRVALMMPNLLQYPVALFGILRAGMIVV
                     NVNPLYTPRELEHQLNDSGAAAIIIVSNFAHTLEKVVEKTSVQHVILTRMGDQLSTAK
                     GTVVNFVVKYIKRLVPKYHLPDAISFRSALQHGYRMQYVKPEVVAEDLAFLQYTGGTT
                     GVAKGAMLTHRNMLANLEQVKATYGPLLHPGKELVVTALPLYHIFALTMNCLLFIELG
                     GQNLLITNPRDIPGLVKELAKYPFTAMTGVNTLFNALLNNKEFQQLDFSSLHLSAGGG
                     MPVQNVVAERWVKLTGQYLLEGYGLTECAPLVSVNPHDIDYHSGSIGLPVPSTEAKLV
                     DDDDNEVAPGEAGELCVKGPQVMLGYWQRPDATDEIIKDGWLHTGDIAVMDEDGFLRI
                     VDRKKDMILVSGFNVYPNEIEDVVMQHSGVQEVAAVGVPSGSSGEAVKLFVVKKDPAL
                     TDDALITFCRRHLTGYKVPKQVEFREELPKSNVGKILRRELRDEARGKVDNKA"
     gene            complement(20724..21305)
                     /locus_tag="MOX77_002371"
     CDS             complement(20724..21305)
                     /locus_tag="MOX77_002371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Slp family lipoprotein"
                     /protein_id="HCA3357886.1"
                     /translation="MAVQKRLIKGALACAFALMLSGCVTIPDAIKGSSPTPQQDLVRV
                     MNAPQLYIGQEARFGGKVVAVQNQQGKTRLEIATVPLDSGARPVLGEASRGRIFADVN
                     GFLDPVDFRGQLVTVVGPITGTVDGKIGNTPYKFMLMQATGYKRWHLVQQVVMPPQPI
                     DPWFYGGRAWPYGYGGWGWYNPGPAEVQTIVTE"
     gene            complement(21376..>21675)
                     /locus_tag="MOX77_002372"
     CDS             complement(21376..>21675)
                     /locus_tag="MOX77_002372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HCA3357887.1"
                     /translation="GVWQGEETEAVLKPERVGERLKQLSGEWATVGTGWSAWPDLAKE
                     CGLTLHDGEVSLPAAEDMLPIASQKLAAGETVAVEHAEPVYLRNEVAWKKLPGKE"
BASE COUNT         5029 a         5869 c         5466 g         5311 t
ORIGIN      
        1 cctggcgggc tggctaccac ctcggttaaa agcggacagc agtgggatgc gccaaatggc
       61 tgggcgccgt tacaatgggt cgctgccgaa ggattgcaaa attatgggca ggatgacgtg
      121 gcaatggaag tcacctggcg ctttttaacc aatgtgcagc acacctacga tcgcgagaaa
      181 aaactggtcg aaaaatatga cgtcagcagt accggaaccg gcggtggcgg cggcgaatat
      241 ccccttcagg acggctttgg ctggagcaac ggcgtgacgc tgaaaatgct cgatctgatt
      301 tgtccgcagg aaaaaccgtg cgatagcgta ccgtctactc gtccggcatc gttaagcgca
      361 acgccgacaa aaacgccgtc tgcagcgacg cagtaacgcg tgtttatagt aggttgaccc
      421 ggcgctgacc gggtcaacgc ttacacgttc tgcagcggtt agccgcgtcg cagaaggcgg
      481 aaaatcacca gcaccacaat cgcgcccacc acggcgacca ggaaactgtg cagattaaag
      541 ccgctgatac tgccgccaat accaaacatc gtcgccagcc atccgccaac gaccgccccg
      601 acgataccga gaatacaggt caggataaat cccccgccat cgcgccccgg cataagcaat
      661 ttggcgataa cgccggcaat caaaccaaaa acaatccagg cgataattcc catttgcgaa
      721 ccctctttcc agtaaaaacg ttttaagtat aggcaaagtc gagcgtcgca tttctgaaca
      781 ctgatttatc tcgcggacat aaaaatttat ttatcgctat taagttcttt ctactgatgc
      841 cgataaccca acgatagtct gcgtatcagg ggttatttcg tgtgagtggt tacaatgagc
      901 agttcctgaa aaaaaatcca ttagcgatat taggcgtgct acgggattta aataaaaatc
      961 aggttccact gcgtatttca tgggcgcatg gtcaattcat tagtaaaatt ttggcggtag
     1021 ccccggaaaa actcatcgtg gattacggca gccaggaata taaaaatagc gccgtattac
     1081 gcgccgggca ggtagccatt atcgcagaaa cacaaggcgc aaaagtcgag ttcacgttgc
     1141 cgcaactcgt tacaggtgaa tatcagcggc tgccggcctt tatcacgccc ctgccgtcat
     1201 cactgtggtt tgtccagcgc cgggagtatt ttcgcattgg cgcgccgctg tatccgcctt
     1261 attacggcgt caccacgcta ccggacaccc gtacgttacg ttttcgcctg tttgatcttt
     1321 ccctgggcgg catgggcgcg ctactggaat ccgccatccc cgacggacta atcgaaggcg
     1381 cacgcttttc gcaggttgaa ctgaacatgg ggccatgggg gattcttcac gttgacgccc
     1441 agcttctcgc catcagcgag cgtaaggtga ttgatgggaa aaatgaaacg atcaccactc
     1501 cccgcctgag ctttcgtttc cttaacgtta gcccggcggt ggagcgggag ttgcagcgga
     1561 ttattttttc gcttgagcgc gacgcccgag aaagagcgaa taaagtgcga gaataatctt
     1621 cacgctaaac tacatggcgt ccagcgcctg ctgaagcttc cagatatagc gcggcgcctg
     1681 cggcgcggga tgattatcaa caacatgttc aaaaaactcg tcagcatcca gatcgttaat
     1741 tttttctatc gccttcttcc tgtcggatga aaaagtacgc aataacgcgc ctgcgccgtt
     1801 agcataagag acgaccagcg catattgcat cacctgcgga tctttgatgc cggccagcgg
     1861 cccattttcc agaatgctca gatacgccgc gcccattgag atgttacgct cagggttttt
     1921 cagctcgctg gtggtcggtt cgccacgcca gcccatacga cggtaaacgt cgcgcccgga
     1981 agtcgacgcc tttaactgca tcaggccaat cgcattggac ttactgaccg cgttagggtt
     2041 gccgccggat tcaatggcga taatcgcggt gattaaatgt ggatcaaccc cccatgccgc
     2101 cccggctttt tcactgatgg gcatccactg catcgcacgc tttacaggca cttcggcatt
     2161 ccacggtgga ttcctgtaat cctgttttga gctacagcca gccagtatta ctaccaaaaa
     2221 agcaaaccat cttaatttca cgtcatctat ccttatagcc gtaacttatc tgccgaagag
     2281 gttataccgc cccggccagg tacttaggtt gcctccctgg tgcgcatcca gaaacgtcgc
     2341 acaacgaggg acatcgccta atatatgcgg catgatatac atttgcattc tattgtcagc
     2401 aaggaattac catgtctctg tttcatttaa tcgccccctc gggctactgt attaaccaac
     2461 aggccgcgtt acgcggcgtt cagcgcctga ctgacgcggg tcatcaggtg gagaatgacg
     2521 aggtgattcg tcgccgctat cagcgttttg ccggtacgga cgcggaacgg ctggccgatg
     2581 ttaattcgct ggcctcgcta acttcgccgg atacgatcgt catgccggtt cgcggcggct
     2641 atggcgccag ccgcttgctg gatcgtatcg actggcaggc gctcgcctcc cggcaacagc
     2701 gcgatccctt actgatttgc ggtcatagcg attttacggc gattcaggct ggactactgg
     2761 cgcaggccaa tgtcatcacc tttagcggtc ctatgctggc ggcaaatttt ggcgccgaaa
     2821 cgctgaatac gttcaccgag caacatttct ggctggcgct acgcaaggcg caatttaccg
     2881 tagagtggca aggcgacggc cctcagtgcg acgtacaggg caccttatgg ggcggaaatc
     2941 tggcgatgtt gatttccctt atcggtacgc cctggatgcc gactatcgat aaaggaattt
     3001 tagtgctgga agatgtcaat gagcatcctt tccgggtgga gcgtatgctt ttgcaactgg
     3061 agtacgccgg aattctaaac cgtcagagcg ccatcgttct cggcagcttt agcggcgcgg
     3121 cgcccaacga gtatgacgcc ggctattctc tggagagcgt ctacgcgttt ttacgttccc
     3181 gtctgtccgt tccgctgatt accggtctcg acttcgggca tgaacagcgt acggtgacgc
     3241 tccctatcgg ggcaaacgca acgcttaaaa atacgcgcca ggggactcaa ctcactttat
     3301 ctggtcatcc tacgctgcaa ttgtaaaaaa agtccccgac aggctaagta aaacgctgcc
     3361 ctggccgtta ttatgttaat gttaaataat acgaagtcgt gtgagtcagg agatataaaa
     3421 cgttggatgc tgcaacaatt attagtctat ttattttagg ttccatcctt gtaaccagca
     3481 gtatcctgtt aagttcattc tcatcgcgac tgggtatccc gattctggtc attttcctcg
     3541 ccattgggat gttagcgggt gtggatggca ttggcggtat tcctttcgat aattatcctt
     3601 tcgcttatat ggtcagtaac ctggcgctgg cgattatttt actcgatggc ggcatgcgca
     3661 cccaggccag ctctttccgg gtagcgctgg gccccgcgct gtcgctggcg acgctcggcg
     3721 tactgatcac gtcggggtta acaggtatga tggccgcctg gctgtttcat ctggatctta
     3781 tcgaaggtct gcttatcggc gcgatagtcg gttccactga cgccgcagcg gtcttttctc
     3841 tgcttggcgg caaagggcta aacgaacgtg taggctccac gctggagatc gaatcgggaa
     3901 gtaacgaccc gatggccgtt tttttgacca ttacattaat tgagatgatc cagaaacatg
     3961 aaaccggcct ggactggatg tttgccgtcc atattatcca gcagttcggt ctcggtattg
     4021 tttttggcct cggcggcggt tacctgctac agcagatgat caaccgtatt tctctgccca
     4081 gcggcctgta tccgatgctg gcgctcagcg gcggtattct gatttttgct ttgacgaccg
     4141 cgcttgaagg cagcggcatt ctcgcggtct atctgtgcgg attcctgtta ggaaaccgtc
     4201 cgattcgcaa ccgttacggc atcctgcaaa actttgacgg actggcctgg ctggcgcaga
     4261 tcgccatgtt cctggtcctg ggactgctgg tgacgccttc cgatctgtgg ccgattgccg
     4321 tccctgcgct tattctctct atctggatga ttttcttcgc ccgcccattg tcggtattta
     4381 ccggcctgct gccttttcgc ggcttcaatc ttcgggagcg cattttcatc agttgggtcg
     4441 gactgcgcgg cgcggtgccg attattctcg ccgttttccc gatgatggcc gggcttgaaa
     4501 acgctcgcct gttctttaat gtcgctttct ttgtggtact ggtgtcgctg ctcctgcagg
     4561 gaacatcgct gtcatgggcg gcgaagagag ccaaagtggt cgtgcctccg gttggctggc
     4621 cagtatcgcg cgtggggctt gacatccatc ctgataatcc gtgggaacaa ttcatctatc
     4681 agttgagcgc cgacaaatgg tgcgtcggcg cggcgttgcg cgacctgcat atgccgaacg
     4741 aaacccgcat tgccgcgcta tttcgcaata atgaactgtt tcaccccacg ggtagcactc
     4801 gcctgcagga aggcgacgta ctctgcgtga ttggccggga gcgcgatctg ccagcgctgg
     4861 gcaaattgtt tagccagtcg ccgccggttt cgttagatca gcgtttcttt ggcgatttta
     4921 tcctcgaagc gaacgcgaaa ttcgccgacg tggcgcttat ctacgggctg gaagaaggaa
     4981 cggaataccg ggataaacaa caaaccctcg gtgaaatcat acagcagctg ctgggcgctg
     5041 cgccggtcgt tggcgatcag gtggagtttg gcggcatgat ttggacggta gctgaaaaag
     5101 aagataacgt ggtacgcaag attggggtac gcgtcgccga agacgaagca gaataaggtc
     5161 gccggacaac gtcgacccgc ccccggtgga ccggtcgacg ccttagcctg agttaggtta
     5221 cgttgtcaca aacggcacgc gcggcgctac ggcgcacagt agcccatagc ccagcgtgcc
     5281 tgccgcagag gcgacatcat cgaccttaat ttctttgccc cataattcaa ccggcgtgcc
     5341 gattcccgcc tgcggacacg gcgtcaaatc caccgccagc atatccattg aaacggtgcc
     5401 tactgttctg gtacggatac cgtccaccag cacgggcgtc ccggtcggcg catggcgtgg
     5461 atagccatcg gcataacccg ccgcgacgat gccaatgcgt tgttcctgag tcacagaata
     5521 ccctccgcca tagcctactc tttcacccgc gctcagcgtc tgcacgccaa taatttcgct
     5581 actcagcgtc atcacgggtt ttagtccggt atcggcaata tcccgccact gtcctgacgg
     5641 cgacgcgccg tacaaaataa tgcccggcct gacccagtca taatgcgcct ggggatgcca
     5701 cagcgtcgct gccgaatttg ataacgagta tgcacactgc aggccttctg tcgccagcgc
     5761 aatacgtctc atcgcctccc cgataccttc cggatgatcg gcctgagcaa aatgtgacat
     5821 cagggtcatt tcaccgacat tgcgcattgc ccgcaattgc tgccagacgg tctgcgcccg
     5881 ctcaggctga aaaccgagtc ggttcatacc gctgttgact ttgacataga tatccagcgg
     5941 cgcgttaagc cgcgcatttt gcagcgcttt caactgccag ttactgtgga tgcaggtggt
     6001 cagccgataa gtgtcatacg cctccaggtc ttgcgcatgg aaaaacccct ccagcatcaa
     6061 tatcggccct ttccacccgc gctcacgcag ggtaatcgcc tcttcaaggt tgagcatagc
     6121 gaaaccatct gtggcgccca gcgcgctcca gacgcgttca ataccgtggc cgtaggcgtt
     6181 agctttcact accgaccaga cgcgcgcctc cggggccgcc cggcgcacaa tagccaaatt
     6241 ttgtttcatt acctgtaaat caaggctggc ctgtataggg cgggtcattt cacttccttt
     6301 atcagttatg cgcgctatgc aaacgttgcg ggcgggtggg cgtaaaatcg gaacggtatc
     6361 gcgccacgct cagatcgtcg tagggtatcg ctggcgtacg acccaacaag atatcgctta
     6421 acaactggcc tgaaccgcag gccatcgtcc agcctaaggt gccgtgtcca gtattaagcc
     6481 acagattttt ataacgggtg cgtcctacta ccggcgtgcc gtccggcgtc atggggcgca
     6541 ggccggtcca gaatgtggcc tgctcaatat gaccgccgcg cggaaaaaga tcgcgcacaa
     6601 ccatctccag cgtctcgcgg cgcggttgca gtaagtcggt attaaagccc acgatttccg
     6661 ccattccccc cacgcgaata cgcttatcaa aacgcgtaat agcgattttg taggtttcat
     6721 caagaatcgt cgataccggc gcgccgtctg gctcgacgat tgggatggtt aatgaatagc
     6781 ctttcagcgg atacaccggg atatcaacaa tgcctttaag catcgccgtc gaatacgatc
     6841 caaacgccat gacatacgca tctgctttaa tgatctcatc ggcgcatttc acgccgtaaa
     6901 tctgatcatt ttcgtacagt aatttttcca cgggagtatt aaagcgaaag gttacgcccg
     6961 cctgctccgc catgcgcgcc agacgctggg taaagagctg acagtccccg gtttcatcat
     7021 tcggtaagcg cagcccgccg gttaatttat gcgcaacctc agccagagcg ggttcaactt
     7081 ccgccagtcg gctggcttcc aggagctgat acggcacccc ggcatcttcc agcacggcga
     7141 tatcacgggt ggcgttctca tactgttgcg cggtgcggaa gagttgtagc gttcccccct
     7201 ggcggccttc atattcgata ccggtcgcgg cgcgtagcgt tttcaggcag tcgcgactat
     7261 attccgccag acgcaccatg cggcctttat tttccatata atgccgggta tcgcagttac
     7321 gcagcatttg ccacatccac ttcagttgaa atggggtgcc atccagacgc accgccagcg
     7381 gcgcatggcg ctggaacatc cattttatcg ccttcagcgg tacgccaggg gccgcccagg
     7441 gtgccgcata tcccggtgaa atttgtccgg cattcgccgc gctggtttct tgcgccgggc
     7501 cggattcgcg atcgatgacg gtgacatcat gccccgcctg actcaagtac caggcgctgg
     7561 tcacgccaac tacgccactc cccaggatga caactcgcat agccactccg ttaatagtaa
     7621 aagaacaatc ttctgattac atcttgataa ctcagatgaa aatattattc aacatatgac
     7681 ttttttatgg tgacgtgctt cacatatacc ctaaagacaa gcgatcccat tggtttggga
     7741 tctcctgcta cgcggcatgg ctatacagca taaaatgatg ccaatacccg attttttgcc
     7801 gttcaatgtg gaggaaatcg caaagaaaag ttttcacgat caagtcgttt tttaacatgg
     7861 tgttctatgc ttgaaaggag gcgctccata cagagagcgt cgccaacaat gagggtgcgc
     7921 gaatggcaat gattgattcc atgaacaagg acaccacacg tttgagcgat ggccccgact
     7981 ggacatttga tctgctggat gtttatctgg cagagataga ccgcgtggcg aaactctacc
     8041 aactggatac ttacccgcac caaattgaag tcatcacttc cgaacagatg atggacgcct
     8101 actccagcgt cgggatgccg atcaactatc cgcactggtc gtttggcaaa aagttcattg
     8161 agacggaacg tctgtataag catggtcaac aaggactggc ttatgaaatt gtgatcaact
     8221 ctaatccctg cattgcctac ctgatggaag agaacaccat caccatgcag gcgctggtca
     8281 tggcgcacgc ctgttacggc cacaactcct tttttaaaaa taattatctc ttccggagct
     8341 ggacggatgc cagctctatc gtcgattacc tgattttcgc ccggaattac attacccgct
     8401 gtgaagaacg ctacggagtg gatgaagtag aaaaactgct cgactcctgc cacgcgctga
     8461 tgaattacgg cgtcgatcgc tataagcgcc cgcagaaaat ctcgttgcag gaagagaaag
     8521 cgcgacaaaa aagccgggaa gagtatctac aaagccaggt gaatatgctg tggcgcacgc
     8581 tgccaaaacg cgaggaagaa aaaactgtcg ccgaagcacg ccgctttcct gctgaaccgc
     8641 aggaaaacct actctatttt atggagaaaa acgccccgtt gctcgagccg tggcagcgcg
     8701 aaattctgcg catcgtgcgt aaagtcagcc agtattttta tccgcagaaa cagacgcagg
     8761 tcatgaacga gggctgggcg accttctggc actacaccat cctgaaccat ctgtatgatg
     8821 aaggcaaagt gacggaacgc tttatgctgg agtttttaca cagccatacc aatgtcgtat
     8881 ttcagccgcc ctataatagc ccctggtata gcggaattaa cccctatgcg ctcggctttg
     8941 ccatgttcca ggatatcaaa cgtatttgtc agtcgcccac ggatgaagat aaatactggt
     9001 ttccggatat tgccggttcc gactggctgg aaacgctgca cttcgccatg cgcgatttta
     9061 aagatgaaag ctttatcagt cagttcctgt cgccaaaagt gatgcgtgat ttccgtttct
     9121 tcacggtact tgatgatgac aggcataatt atctggagat ctccgccatt cataacgaag
     9181 aaggttatcg ggagattcga tcaaaactgt cgtcacagta taacctgagc aacctggagc
     9241 cgaatattca ggtctggaat gtggatttac gcggcgacag atcgctgacg ttgcgttata
     9301 tcccgcataa ccgcgcgccg ctggataaag gccgcaaaga ggtgctgaaa catgtgcatc
     9361 ggttatgggg ctttgatgtg atgctggagc aacaaaatga ggatggcagc gtagaactgc
     9421 tggagcgttg tccgccgcgc atgaacacgc tgtaatcgag atgctgcccg gtagtgtttg
     9481 cgtctaccgg gcatcgcggg attatcgtcc ctgaatcgct aaatcgccgg gcagattttt
     9541 ctgcatccga tgccaaatct cgccgctgtc atgcccataa cgccgcaccg tttcatacac
     9601 ctggtcgtgc gcgccctgct cgcataacga cgataattta tgatagaaac ccagtgccag
     9661 actgcgcgct tccggattgg cgaaatagtg gcgaccaatg cgggtgtata accctttcat
     9721 gccgttcagg atcaagccgt aaataggatt gccggaggca aatgccagac cacgaaagat
     9781 gttatagtcc agatcggcga atgcatcggc atggtcggcc acttcgtggg cagtggccag
     9841 cacttcctgc gccttatccg ggtgttgacg caatgcggta cgaataaaga tagtagaaat
     9901 attggtacgc accgacaaca aattgtcgat cagttgcgga acgctttcat gatcaaggcg
     9961 ggccagcgtt tcaaggatat tcagccctga cgtttcccaa aaattattaa cctttgtcgg
    10021 tttgccatgc tgaatggtca gccagccatc tcgcgccagc cgctgtaaca cctcgcgtaa
    10081 tgtcgtgcgc gtcacgccga tcagttcgga gagttctcgt tctgccggta agatcgtgcc
    10141 aggaggaaag cagttattcc agatactttc aataatatac tcttccgcga aacccgcggg
    10201 gctctgcgcc ttaatgacca tagtgagatt tccattacac agcaaaacat agttgtactc
    10261 atcataccag acgggcgtaa cacctgatag cggacgcaat gaagaaaaag gggatcaagg
    10321 caccatttct gatatcgcct gccaatatcg ttaaggactt gcttgcattc gtcgcgctcg
    10381 ctactctctg tgtttaaaca taaaaacgct atttcatttt tctaggtaag gaaaaatttc
    10441 atggagatct catggggtcg cgccatgtgg cgcaactttt taggccagtc gcccgactgg
    10501 tacaaactgg cactacttgt ctttttaatt gttaacccat tcattttctt agctaatccc
    10561 tttgttgctg gttggctgct ggtggcagag tttatcttca ccctggcgat ggcgttaaag
    10621 tgttaccccc tgctgcccgg cgggttactg gccattgaag ccgttatcat cggcatgacc
    10681 agcgccgccc atgtacgtga agaggttgcc gccaacctgg aagtcttgct gctgctgatg
    10741 tttatggtgg caggcatcta ctttatgaag cagttattgc tgtttatttt tacccgtctg
    10801 ttactcagta tccgctcgaa gatggttctg tcgctggcct tttgcgtcgc cgccgcattc
    10861 ttgtcggctt tccttgacgc gcttaccgtc gttgcggtgg tgatcagcgt cgccgtcggt
    10921 ttttacggga tttaccatcg tgtggcctca tcgcgcggcg aagagaacga tatgctggac
    10981 gacagccata tcgatccgca ttacaaaacg gtgctggagc aattccgcgg attcttgcgt
    11041 agtctgatga tgcatgcagg cgtggggacg gcgctgggcg gcgtcatgac catggtcggg
    11101 gagccgcaaa acctgatcat cgctaaagct gctggctggc atttcggcga cttctttttg
    11161 cggatgtcgc ctgtcaccgt cccggtactg gtatgtggac tgttaacctg tatgctggtc
    11221 gagaaaatgc gctggtttgg ctatggcgaa acgttgcccg aaaaagtccg cgacgtcttg
    11281 cagcaattcg acgatcaaag ccgtaagaag cgcacccgcc aggataaaat taaactaata
    11341 gtccaggcgg ttattggcgt ctggctggtt accgccctcg ccctccatct cgcggaggtg
    11401 ggactgattg gtctgtcggt cattattctg gccaccgcgt taacgggtgt caccgatgaa
    11461 cacgccatcg gcaaagcgtt taccgagtcg ctgccgttta ctgcgctgtt aaccgttttc
    11521 ttctctattg tggcggttat tatcgatcaa catcttttcg cgccgattat tcagttcgtc
    11581 ttgcaagcct ctgaacacgc acagctaacg ctgttctatc tctttaacgg cctgttgtct
    11641 tccatctcag ataacgtctt tgtcggcacc atttatatca acgaagcgaa ggcggcaatg
    11701 gaaaacggcg caatcagctt aaaacagttt gagctgctag ctgtggccat caataccggt
    11761 actaacctgc catcggtagc gacgccaaat ggtcaggcgg cattcttatt cctgctgacc
    11821 tccgcgctgg cgccgttaat ccgtctctcc tatggccgta tggtctggat ggcgttaccg
    11881 tacactatcg tactgaccct gatagggcta ctgtgcgtcg aattcactct tgcgccggcc
    11941 accgaatgga tgactcaggc aggatggtta gcaacgcttt cgtaacgttt ggccgggcaa
    12001 tacaccgccc ggctccgatt tttgcctgat aattatccaa ttacacatta tttcatttcc
    12061 cgctagtggc gcacgaattg aattggttta cactgcggtc tctacgcatg ttgcagggaa
    12121 attattatgt tgcgattttt aaaccagtgc tcacggggtc ggggcgcatg gttactgatg
    12181 gcgtttaccg ccctggcgct ggaaatggtg gcgctgtggt tccagcacgt catgttactt
    12241 aaaccttgcg tgctatgtat ttacgaacgt tgcgccctgt ttggcgtgat gggcgcgggt
    12301 ctggtcggcg caatagcgcc gaaaacgccg ctgcgatacg tggcaatggt tatctggatt
    12361 tacagcgcct ggcggggtct acaactggcg tatgaacata cgatgattca gttgcatccc
    12421 tcgccgttca tgacctgtga ctttatggcg cgctttccag actggttacc gttgggtaaa
    12481 tggctaccgc aggtgtttgt ggcatccggt gattgcgccg agcgccagtg gtcgttttta
    12541 acgctggaga tgccgcaatg gctgttgggg atctttgccg cttaccttgt ggtagcgata
    12601 gctgtcgtca tagctcaggc atttaagcct aaaaaacgcg acctgttcgg tcgttgatac
    12661 acacgctcct tcgggagcgt ttttttgccc gaagcgttgt ttgccagtga ttaaaaggtg
    12721 tatattaaat acatctttta atcaccacat cagggagatg tcttatgtcc cacttacgca
    12781 tcccggcaaa ctggaaagtt aaacgctcta ccccctttta caccaaagag aatgttccgg
    12841 cggcactgct ctctcatcac aacacagcgg caggcgtttt cggacaactc tgcgtgatgg
    12901 aaggcaccgt gacctactat ggctttgcga atgaaaccgc gacagaacca gaagtgaaag
    12961 tggtgattaa tgccgggcaa ttcgccacca gtccgccgca atactggcat cgggtagagc
    13021 tgagcgatga tgcgcggttc aacattcatt tttgggtaga ggaagaccat cagggcgagg
    13081 aaatgtatca acagaaaaaa gcctgacatc ggtaaaccag ttaccactgg gcggcgtccc
    13141 gcccagtagc caggtgatta atggcgctaa ttaaacgcta gagtagttta attttaacgt
    13201 ggtatccctc aagccctttc atcgtttctc gcggcgcgaa ctctatttcg gaaacctctt
    13261 gcccggtttt cttccgtagt tcggcgacct ttttgctaat gagtgccgcg atttcctctt
    13321 ctgctttatg tgtcaactct tcgctgttca ttgatttcct cctttgaact cgcaaacggc
    13381 taagcgcaat aagacagtgt cgtcatggac gcgctactat tttaacgtac aaaaaattat
    13441 aggctatctt tctgaggatt atcaggatgt ttcgctttag aagatgcaaa aaaccgcctg
    13501 gcacagacgg tgcatcaggc ggttggttaa tagcacaaga cgctatctac gaggatcttc
    13561 aacctcattc tgggtatccg ggtcgagagg atcgtctccc tctggcgtat ccggaatatt
    13621 ttcaccagga agcggctcat cctctggtaa tggatcgact aaatcaggac gttcagacat
    13681 aaagcctcca acgaaccata gttattaaag ataccctaca gcactacttt tggtttttct
    13741 ttggattttt tccttcgtct tcgggtgtct tatcaggctt cctgggctga tcctttgaaa
    13801 cgcgcaacgg ttggttattc atggggtaac tcctcaggat aggcagcgat atactgcttt
    13861 gaaagtatag agtcgccgcc atacgtgcgc gagcgcagcg acaaggcgcg tcagggaaga
    13921 atagaaggca gtgataacgc caggtgacgg aatttgcacg caattcctga tttcaggggc
    13981 cgcccagcgt aaattaaaga attgtaaaca atcagccgtt ttgccgaaga cttattctgc
    14041 ccacgacggt ttatttaaaa tatgatcctg ccagtcccgt acttcggatt ctttaaccgc
    14101 gatatgacgg acagaaattc gctcgccatg catagcggct ttcgatccag tctgcagcgg
    14161 atgccacgtc ggcaagggct taccttccgc caacaaacgg taggcgcagg tcatcggcaa
    14221 ccattcaaag tctggcaagt tttcgcgagt gagtttgata cagtcgggtt caaattcaaa
    14281 acggcgttca taatgacggc actggcacgt tttgatattt aattgcctgc acgccacgtt
    14341 ggtgaagtag atttcatctg tatcttcatc catcagctta tgcaggcagc attgaccgca
    14401 gccatcgcac agcgactccc actcggcatc ggtcatttca tccagggttt tacgttgcca
    14461 gaaaggtgta tcgctcatta aagtatccgc cattgcatta aagctgcacc ttataaccag
    14521 tctggcctgc agatgcaagt tttaccgccg ctgaaggcgg caagcagatt ttacagaacg
    14581 cgagtagaca acgtttcgcc attaaaacga atgtccagct catcgccgct taataatggc
    14641 cccacgcctg ccggcgtgcc ggttagcacc acgtccccgg ctttgagcgt aaaatagcgg
    14701 ctcatatagg cgataagggg cacaatagga tgaatcatat ccgcggtcga cccttgctgg
    14761 cgaacctcgc cattaacgtt aagtccgata accgtatttt gcggatcgcc gcagaaggcc
    14821 gcgacaggga tgaagcctga aatcggacat gcgttatcga aacctttggc tttttcccaa
    14881 ggctgtccgg cctttttcat tttcccttga atatcgcgca gggttaaatc aagcgccacg
    14941 ccataaccgg ctatcgcttt acgtacatga tcttcggtcg cctggcggag cgttgcgcca
    15001 atcagcacgg caagctcaac ttcatgatga acagcgccca tatccgccgg aatcgccagc
    15061 ggctggcgaa tatcacacaa tgcggtttcc ggcttgataa aaagcacggg ttcttccggc
    15121 gtcgcgctgc ccatctcctt gatgtgattt gcgtaattac tgcccacgca gaccacctta
    15181 cttaccgggt aatcaagcaa ggcaccttgc cagttacgat gttgatacat attttcccct
    15241 aagatcatga tggaattcag gcgcggcgcc gaataccgtt taacggtcag cgtgcgacgt
    15301 attttgtccc accgaagaaa gatgttgttt cagcaaatct tccggcggcg gcggcaattg
    15361 taaataatag ccctgctcgc ttaacgcctg ttttactttt tcgagctcgg cattgactaa
    15421 ttttttacgt ccatcaagcg gcagcatcat cgctaactgc ggctgaccga atcctttcat
    15481 caacgcgtca ggcacccgcg aaaaatcgtc ttttttttcg acatacaaat aggtttgatc
    15541 gcgcttgcta cttctataga tcacacaaaa catactttta ctctgaatta acgggatggt
    15601 gacttgcctc aatataatac tgactataac atgccttctg gacttcggaa tatcactccg
    15661 tatcggagat gataaatagc aaattgagta aggccaggat gtcaaacacg ccaatcgagc
    15721 ttaaaggcag tagcttcacc ttatcagtgg ttcatttgca tgaagcggaa ccagaggtta
    15781 ttcgtcaggc gttagaagac aaaatagcgc aggctcctgc gtttttaaaa cacgcccctg
    15841 tcgttattaa cgttagcggt cttgaaagcc cggtaaactg gccggaactg cataagatcg
    15901 tgacctcaac cggcttacgc attatcggcg tgagcggctg taaagacgcc agcctgaaag
    15961 tagaaatcga tcggatgggt cttcctttac tgactgaagg taaagagaaa gcggttcggc
    16021 ctgcgcccgt tgagccggca acgcccagcg aaccgccgca aaacgctaat cccatcacaa
    16081 aaacgcgatt aattgatgtt ccggttcgtt ccggtcagcg catttatgct ccacaatgtg
    16141 atctgattgt tacaagtcac gtcagcgctg gcgcagagct tatcgctgac ggcaatatcc
    16201 atgtctatgg catgatgaga ggtcgcgcgc tggcaggggc gagcggcgat cgggaagcgc
    16261 aaattttttg tacccatctg acggcagaac tggtctctat cgcaggtgtt tactggctga
    16321 gtgataaaat cccggcagaa ttttatggca aagcggcgcg cctgcgttta gcagacaacg
    16381 ctttgacagt tcaaccgttg aattgatccc tttttaacaa ggaattttta tggcacgcat
    16441 tattgttgtt acttcgggta aagggggcgt tggcaagacc acctccagcg cggccatcgc
    16501 tacaggtttg gcccagaagg gaaagaaaac tgtcgtcatt gattttgata tcggactgcg
    16561 taacctcgat ctgattatgg ggtgcgaacg tcgtgtcgtt tacgattttg taaacgtcat
    16621 tcagggcgat gcgacactga atcaggcgct gatcaaagat aagcgtactg aaaatctctt
    16681 cattcttccg gcgtcgcaga cccgggataa agacgcgcta acgcgcgaag gcgtcgctaa
    16741 ggtactggac tcactgaaag caatggactt tgagttcatt gtttgcgact cgccggcggg
    16801 tatcgaaacc ggggcgctga tggcgctcta ttttgccgat gaagcgatca tcacgaccaa
    16861 cccggaagtc tcttctgtcc gtgactcgga ccgtattctg ggtattctgg catcgaaatc
    16921 tcgtcgcgca gaaaatggcg aagaaccgat taaagaatat ctcctgttga cgcgctacaa
    16981 tccaggccgc gtcaataaag gcgacatgct cagcatggaa gatgtactgg agattctgcg
    17041 tattaaactc gtcggtgtga tcccggaaga tcaatccgta ctgcgcgcat cgaaccaggg
    17101 cgaaccggtg attcttgacg ccactgcgga tgcgggtaaa gcctatgcag ataccgtaga
    17161 tcgtctgttg ggagaagaac gtcctttccg cttcattgaa gaagagaaga aaggtttcct
    17221 caaacgcctg ttcggaggat aaattatggc attactggat ttttttctct cgcggaaaaa
    17281 gagtaccgct aatattgcaa aagagcggtt gcaaatcatt gtcgcggaac gtcgccgtag
    17341 cgatgccgaa ccgcattatt taccgcagtt acgtaaagat attcttgagg tcatttgtaa
    17401 atacgtacaa atcgatccgg aaatggttac cgtccagctt gagcaaaaag atggtgatat
    17461 ctccatcctt gaacttaacg taacgctgcc ggaagccgaa gagtcaaaat aagctctttt
    17521 atgggaaaat tcctggatta aaaaaggcag aagaatctgc cttttttatt tttttacatt
    17581 attccgaata cggacattta tttcactggc cgttttcccg gcaattaccg tcgttaaagc
    17641 gaatactcct gcaacagaag agttaacttc tccgccatca gttcggcgcg ccagccggaa
    17701 atcaattccg gttgcccatt ttgcggtttt aatttccagt gccagttaag caactgatta
    17761 atctgccgac gcgatgccag tagctcgccg ctgacgtgat gcgacgcgct cacctccgcc
    17821 actagcgctt tgatggcctt aaacgctttg cgatagcccg gcatgtccat cagattcaac
    17881 aggggttccg gcaatgcctc ttccggtagc gcctgtgctt tcgccaccag cgatatcaac
    17941 gtcttgccgt gaaaacgaat ctcgctgccg gaaagcccca ggctatccag ctcaccgaga
    18001 ctgcccggca tataacgcgc gaccgcccac aggttttctt cacgcacaac aaagttcacc
    18061 gccatatcgc gctcacgcgc cttacgtagc cgccagtcag ctaaaagttg cagacaggct
    18121 aactggcgag tacgcagttg ccaggcattg gtgatatccc gccatgcttc ttccggcgcc
    18181 tgaatctcct gacgacgctg ctgcatcaat cggcattcat caagcgcggc aggcagccat
    18241 cctgcggctt cagtttcaat catcagcttt ttggcgatcg gtaacagata ccagacatcc
    18301 gccgccgcgt attcacactg acgttcgctt aaaggccggg ctaaccagtc ggtacgagac
    18361 tcgcttttgt ccagcgccac gcccgtatac tcttctacca tcgacgcaaa accccacgac
    18421 agcggacgcc cgcaaaacgc cgccagaatt tgcgtatcaa tcagaggttc cggcagttcg
    18481 ccaaacgcat tcagaaatac ttccagatct tcgctacccg cgtgcagaaa tttggtgatt
    18541 cccgtatcgc gcaacaccgc ttttaacggc gaccagtcgc tgatgccgag cggatcgatc
    18601 agggcgacat ttgccccgtc aaataactgg atcaatccta actgcgggta ataggtgcgg
    18661 gtacggacaa attccgtatc taaagcaata gccggacatg cgcggacagc ctcacacagg
    18721 ctcgccagcg catcgtccgt ttcaatcatt tggtaattca aatcgtgttc tctttggttc
    18781 gcgccaaaaa aaacgccggc ttaaccggcg tctctcgtta gctgacttaa cgctcaggct
    18841 ttattgtcta ctttgccacg ggcttcgtca cgcagttctc gtcgtaaaat tttcccaacg
    18901 ttagattttg gtaattcctc gcgaaactcg acctgtttgg gcaccttata tccggtcaga
    18961 tggcgacggc agaaggtgat caacgcatcg tcagtcaatg ccggatcttt cttaaccaca
    19021 aaaagcttca ccgcttcgcc gctactaccg gaaggcacgc caaccgccgc gacttcctgc
    19081 acgccagaat gctgcatcac cacatcttca atttcgtttg gataaacgtt gaaaccagaa
    19141 accagaatca tatctttctt acgatcgaca atccgcagaa agccgtcttc atccataacc
    19201 gcaatatcgc ccgtatgcag ccagccatct ttaatgattt catccgtcgc gtcaggacgc
    19261 tgccagtatc ccagcataac ctgcgggcct ttcacgcaaa gctctccggc ctcacccggc
    19321 gcgacttcgt tgtcatcgtc atccaccagt ttggcttctg ttgacggtac tggcaggccg
    19381 atactgccgc tgtgataatc aatatcatgc gggttgacgc tcaccagcgg ggcgcactcg
    19441 gtcagcccgt agccttccag caggtattgc ccggtcagct ttacccaacg ttccgcaacg
    19501 acgttttgca ccggcatccc gccgccggct gacagatgca gcgaagaaaa atccagctgt
    19561 tgaaactctt tattattgag cagggcgttg aatagcgtat taacgccagt catcgccgta
    19621 aatggatatt tcgccagctc cttgaccaga ccggggatat cacgcggatt ggtaatcagc
    19681 aggttttgcc cacccagctc gataaaaagc agacagttca tggttaaggc aaaaatgtga
    19741 tacagcggca gcgcggtcac taccagctct ttccccgggt gcagcagcgg cccataggtc
    19801 gctttcacct gctccagatt cgccagcata ttgcggtggg tcaacatcgc gcctttcgcc
    19861 acgcccgtcg taccgccagt atattgcagg aaagccagat cttcagcgac aacctcgggt
    19921 ttgacatact gcatacggta gccatgctgt agcgcgctgc gaaacgagat cgcatctggc
    19981 aagtggtatt ttggcaccag acgcttgatg tatttcacga caaagttaac aaccgtacct
    20041 ttggcggtag aaagctggtc gcccatccgc gtcagaataa cgtgctgtac cgacgttttc
    20101 tcgaccactt tttccagcgt atgggcaaag ttagaaacaa taatgattgc cgccgcgccg
    20161 ctatcgttaa gctgatgctc aagttcgcgc ggcgtgtaaa gcgggttaac gttcaccaca
    20221 atcatgccgg cgcgtaaaat accaaatagc gcgacaggat actgcaacag gtttggcatc
    20281 atcagcgcca cacggtcgcc ttttttgagt cccagccctt gttgtaaata agccgcaaat
    20341 gcccgactac gttcttctaa tttacggaag gtcattacct cccccatatt gacgaacgca
    20401 ggctgatcgg catagcgcgt cgccgcatgt tcaaacagtt caaccaggga ttgataacgg
    20461 tcagggttga tctccgccgg aacatcagca ggataacggt taagccaaac cttcttcaat
    20521 gcatcacctc taaaatgagt gttcgtcgtc atcacaaccc cagtcaataa acaagttgtt
    20581 aacattatat taactcagcg taccagttta ttaattacgc aactgaaagg ttgcgaagcg
    20641 cgtcactatt tatttttatt atgtctctat gaatgcagaa acagcggacc agccgctgtt
    20701 tcttttattg ataaaacaaa gggttactct gttactatcg tctgaacctc tgcgggtcca
    20761 gggttatacc atccccaacc gccatatcca taaggccagg cgcgtccgcc gtaaaaccac
    20821 ggatcgatcg gctgtggagg catgacgacc tgctgaacaa gatgccagcg tttatagccg
    20881 gtagcctgca tcagcataaa tttatacggc gtattgccga ttttaccgtc aaccgtgccg
    20941 gttatcgggc cgacaacggt aactaactgg ccacggaagt ccaccgggtc cagaaaaccg
    21001 ttcacatcgg caaaaattct gccgcgcgag gcttcgccca gaacaggacg cgcgccgctg
    21061 tcgagcggta cggtcgcgat ttcaagccgg gtttttccct gctgattttg taccgccaca
    21121 actttgccgc caaaacgcgc ctcttgcccg atatagagct gcggcgcatt catcacccgc
    21181 accaaatcct gctgcggcgt cggactcgaa cctttaatgg catccgggat agtcacgcaa
    21241 ccgctcagca taagcgcaaa agcgcacgcc agcgcccctt ttattaaccg tttttgaacc
    21301 gccatgatgc gactcctttt tctcgacctc tattccaccc cacagcataa agtatggggg
    21361 taatagtagt gagagtcatt ctttgccggg aagtttcttc cacgccactt cgttacgcaa
    21421 ataaaccggc tcggcatgtt ccacggcaac ggtctctcct gccgccagct tttgactggc
    21481 gatgggcaac atatcttccg ctgccgggag cgacacctcc ccatcatgaa gcgtcaggcc
    21541 gcactccttc gccagatcgg gccatgcgga ccaacccgtt cctacggtcg cccactcgcc
    21601 ggaaagctgt ttcaaccgct cgccgacccg ttccggtttc agcaccgctt ccgtctcttc
    21661 gccctgccag acgcc
//
LOCUS       DAGWFR010000063        20832 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.064, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000063 DAGWFR010000000
VERSION     DAGWFR010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 20832)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20832)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20832
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.064"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..313
                     /gene="ugpQ"
                     /locus_tag="MOX77_002373"
     CDS             <1..313
                     /gene="ugpQ"
                     /locus_tag="MOX77_002373"
                     /EC_number="3.1.4.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462454.1"
                     /note="hydrolyzes diesters during transport at the inner
                     face of the cytoplasmic membrane to glycerol-3-phosphate
                     and alcohol; induced when cells are starved for inorganic
                     phosphate; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HCA3357888.1"
                     /translation="LLSSFEIEALEAAQAAVPELPRGLLLDKWREDWRELTTRLGCVS
                     LHLNHKLLDETRVQEIKAAGLRILVYTVNQPQRAAELLRWGVDCICTDRIDDIGPHFQ
                     F"
     gene            complement(310..681)
                     /locus_tag="MOX77_002374"
     CDS             complement(310..681)
                     /locus_tag="MOX77_002374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2756 family protein"
                     /protein_id="HCA3357889.1"
                     /translation="MKRLLLITALLPFAVLAQPINTMNNPNQPGYQIPSQQRMQTQMQ
                     TQARSQQQNLQSQLNANTQRVQQGQPGNGMLGQQTLPNTQGGMLSGSGNPDRMLNHSQ
                     PMLQQDSGTPQPDIPLKTISP"
     gene            807..2549
                     /gene="ggt"
                     /locus_tag="MOX77_002375"
     CDS             807..2549
                     /gene="ggt"
                     /locus_tag="MOX77_002375"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HCA3357890.1"
                     /translation="MKPTFMRWVAIAALLAGGTFSAVANPPVAPPVSYGVEEDVFHPV
                     RATQGMVASVDAMATQVGVDILKQGGNAVDAAVAVGYALAVTHPQAGNLGGGGFMLLR
                     TKDGATTAIDFREMAPAAATRDMFLDDQGNADAKKSLTSHLASGTPGTVAGFSLALEK
                     YGTMPLNKVVRPAMKLAEEGFVVNDALADDLKTYGSEVIPNHENSKAIFWKDGEPLKK
                     GDKLIQKNLAKSLEMIAENGPAAFYKGAIADQIAGEMQKNGGLMTKEDLASYKAVERT
                     PISGDYRGYQVFSMPPPSSGGIHIVQILNILENFDMKKYGFGSADAMQIMAEAEKYAY
                     ADRSEYLGDPDFVKVPWQALTNKAYAKTLADQIDINKAKPSSQIKPGKLAPYESNQTT
                     HFSVVDKDGNAVAVTYTLNTTFGTGIVAGNTGILLNNQMDDFSAKPGVPNVYGLVGGD
                     ANAVEPKKRPLSSMSPTIVVKDGQTWLVTGSPGGSRIITTVLQMVVNSIDFGMNVAEA
                     TNAPRFHHQWLPDELRVEKGFSPDTLKLLEQKGQKVALKEAMGSTQSIMVGPDGELYG
                     ASDPRSVDDLTAGY"
     gene            complement(2594..3628)
                     /locus_tag="MOX77_002376"
     CDS             complement(2594..3628)
                     /locus_tag="MOX77_002376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotriesterase"
                     /protein_id="HCA3357891.1"
                     /translation="MKGFLQTVTGPVAHTDMGLTLPHEHLFNDLSSVVDEPHYAFSQQ
                     LVGKKVSADLQWGLKHDPYCCADNMDRKEIDDVIFEINNFMSLGGRTIVDATGSESIG
                     RDASALREVALKTGLNIVASSGPYLEKFESTRIHKPVELLASLIDKELNQGIGETDIR
                     AGMIGEIGVSPAFTQAERNSLRAASLAQCNNPHTAMNIHMPGWLRLGDEVLDIVLEEM
                     NVSPAKVSLAHSDPSGKDVVYQRKMLDRGVWLEFDMIGLDITFPKEGVAPGVQETADA
                     VANLIALGYADQIVLSHDVFLKQMWAKNGGNGWGFVPNVFLAYLAARGVDNDTLRKLC
                     IDNPARLLTA"
     gene            complement(3625..4596)
                     /locus_tag="MOX77_002377"
     CDS             complement(3625..4596)
                     /locus_tag="MOX77_002377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HCA3357892.1"
                     /translation="MNKNKYSTPLLMLATILAGMLSPMQSAVNGQLGHWLQDGNACAV
                     ISFASGLVVMFFIIIARKETRQQFASIPTLIKKRKIPLWNWFAGLCGAMVVFSEGASA
                     SALGVATFQTALISALLLSGLLCDRFGIGVEEKKYFTPWRITGALFAVIATIFVVSPQ
                     WHSTSFILLAILPFLAGLLAGWQPAGNAKVAEATGSMLVSITWNFIVGFCVLGAALAI
                     RIALGHVTIQLPDTWWMYLGGPLGLLSIGLMAILVRGLGLLMLGVASTAGQLLGSVLI
                     DELIPSLGNTVYLVTIIGTLFALVGAIVTTIPEYRASKMAQKMEVSE"
     gene            complement(4650..5411)
                     /locus_tag="MOX77_002378"
     CDS             complement(4650..5411)
                     /locus_tag="MOX77_002378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytoplasmic protein"
                     /protein_id="HCA3357893.1"
                     /translation="MNNTQKKLKVLFIGESWHIHMIHSKGYDSFTSSKYEEGATWLLE
                     CLRKGGVDIDYMPAHTVQIAFPESIDELNRYDVIVISDIGSNTFLLQNETFYQLKIKP
                     NALESIKEYVKNGGGLLMIGGYLSFMGIEAKANYKNTVLAEVLPVIMLDGDDRVEKPE
                     GICAEAVSPEHPVVNGFSDYPVFLGYNQVVARDDADVVLTINNDPLLVFGEYQQGKTA
                     CFMSDCSPHWGTQQFMSWPFYTDLWVNTLQFIARK"
     gene            complement(5427..6641)
                     /locus_tag="MOX77_002379"
     CDS             complement(5427..6641)
                     /locus_tag="MOX77_002379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462448.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR family transcriptional regulator"
                     /protein_id="HCA3357894.1"
                     /translation="MKFERHHRILKELSISGVVKVSNLAKSLKVTKETIRSDLNELAG
                     QGYLTRCHGGAFITLDSLDNVAKNEIAYVLEKYESAQKIKKGLSAMKNNVCVIGSFNV
                     DIISYLPRLPSTGESLLADKFIFSPGGKGCNQALAASYADSDVHFITKVGSDHFSDYA
                     INFINSSKIHKSVIYQTKETQTGTATIMVNGDTGDNVIAIYPGANMTISPDEITIQKE
                     AIVHSDIVLVQLETNYEALQQTIRLAQKNDIPVIINPAPYNDMVNTIIDNIDYITPNE
                     TEAGLLANMAVNDIESAKCAAKIIHQKGVKNTIITLGSKGSLAYDGTQFIYSPAFPAV
                     VKNTAGAGDAFNGALSSGLAKGKSLASALCYASAFASLAVETPNASDMPENDSVLHRI
                     QGSHYKQTISTH"
     gene            complement(6906..7394)
                     /gene="yhhY"
                     /locus_tag="MOX77_002380"
     CDS             complement(6906..7394)
                     /gene="yhhY"
                     /locus_tag="MOX77_002380"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HCA3357895.1"
                     /translation="MSEIVIRHAEPKDYDAIRQIHAQPEVYHNTLQVPHPSLEMWQAR
                     LTEQAGVKQLVACIDDIVVGHLSIQVTQRPRRSHVADFGICVDARWHNRGIASALIRT
                     MIDMCDNWLRVERIELTVFVDNEPAVAVYKKYGFEIEGTGKKYGLRNGEYVDTYFMAR
                     VK"
     gene            7861..8898
                     /locus_tag="MOX77_002381"
     CDS             7861..8898
                     /locus_tag="MOX77_002381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HCA3357896.1"
                     /translation="MTLHCAFIGFGKSTTRYHLPYVLNRKDTWHVAHIFRRHAKPEEQ
                     APQYSHIHFTSDLDEVLGDPQVKLVIVCTHADSHFEYAKRALEAGKNVLVEKPFTPTL
                     AEAKVLFELARSKGLTVTPYQNRRFDSCFLTAKKAIESGKLGKIVEIESHFDYYRPVA
                     ETKPGLPQDGAFYGLGVHTMDQIISLFGRPDHVAYDIRSLRNKANPDDTFEAQLFYGA
                     LKAIVKTSHLVKIDYPKFIVHGTKGSFVKYGIDQQETSLKANIMPGEPGFAADESVGV
                     LEYVNDEGVTVKEEVKPETGDYGRVYDALYQTLTIGTPNYVKESEVLTNLEILERAFE
                     QATPATITLAK"
     gene            9022..9717
                     /locus_tag="MOX77_002382"
     CDS             9022..9717
                     /locus_tag="MOX77_002382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004213399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HCA3357897.1"
                     /translation="MIYLRKANDRGHANHGWLDSWHTFSFADYYDPNFMGFSALRVIN
                     DDVIDAGQGFGTHPHKDMEILTYVLEGAVEHQDSMGNKEQVPAGEFQIMSAGTGVRHS
                     EYNPSKTDRLRLYQIWIIPQETGITPRYEQRRFDAAQGKQLVLSPDARDGSLKVHQDM
                     ELYRWALLKDEQSVHQIAAERRVWIQVVKGNVTINGTKATTSDGLAIWDEQAISIHAD
                     SDSEVLLFDLPPV"
     gene            10084..11079
                     /gene="gntR"
                     /locus_tag="MOX77_002383"
     CDS             10084..11079
                     /gene="gntR"
                     /locus_tag="MOX77_002383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001693277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate operon transcriptional repressor GntR"
                     /protein_id="HCA3357898.1"
                     /translation="MKKKRPVLQDVADRVGVTKMTVSRFLRNPEQVSVALRGKIAAAL
                     DELGYIPNRAPDILSNATSRAIGVLLPSLTNQVFAEVLRGIEAVTDAHGYQTMLAHYG
                     YKPEMEQERLESMLSWNIDGLILTERTHTPRTLKMIEVAGIPVVELMDSQSPCLDIAV
                     GFDNFEAARQMTAAIIARGHRHIAYLGARLDERTIIKQKGYEQAMRDAGLVPYSVMME
                     QSSSYSSGIELMRQARREYPQLDGIFCTNDDLAVGAAFECQRLGLKIPDDMAIAGFHG
                     HDIGQVMEPRLASVLTPRERMGSIGAERLLARIRGETVTPKMLDLGFTLSPGGSI"
     gene            11218..11751
                     /gene="gntK"
                     /locus_tag="MOX77_002384"
     CDS             11218..11751
                     /gene="gntK"
                     /locus_tag="MOX77_002384"
                     /EC_number="2.7.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconokinase"
                     /protein_id="HCA3357899.1"
                     /translation="MSTTNHDHHVYVLMGVSGSGKSAVASAVAHQLHAAFLDGDFLHP
                     RCNIEKMASGEPLNDDDRKPWLQALNDAAFAMQRTNKISLIVCSALKKHYRDLLREGN
                     PNLSFIYLKGDFDVIESRLKARKGHFFKTQMLVTQFETLQEPGADERDVLVVDIDQPL
                     EGVVASTIEVINKGSTL"
     gene            11748..13088
                     /gene="gntU"
                     /locus_tag="MOX77_002385"
     CDS             11748..13088
                     /gene="gntU"
                     /locus_tag="MOX77_002385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate transporter"
                     /protein_id="HCA3357900.1"
                     /translation="MSTLTLVLTAVGSVLLLLFLVMKARMHAFVALMVVSMGAGLFSG
                     MPLDKIAATMEKGMGGTLGFLAIVVALGAMFGKILHETGAVDQIAVKMLKSFGHNRAH
                     YAIGLAGLICALPLFFEVAIVLLISVAFSMARHTGTNLVKLVIPLFAGVAAAAAFLLP
                     GPAPMLLASQMHADFGWMILIGLCAAIPGMIIAGPLWGNFISRYVELRIPDDITEPHL
                     GEGKMPSFGFSLSLILLPLVLVGLKTIAARFVPEGSTAYEWFEFIGHPFTAILVACLV
                     AIYGLAMRQGMPKDKVMEICGHALQPAGIILLVIGAGGVFKQVLVDSGVGPALGEALT
                     GMGLPIAITCFVLAAAVRIIQGSATVACLTAVGLVMPVIEQLNFSGAQMAALSICIAG
                     GSIVVSHVNDAGFWLFGKFTGATEAQTLKTWTMMETILGTVGAIVGMIAFQLLS"
     gene            complement(13011..13385)
                     /locus_tag="MOX77_002386"
                     /pseudo
     CDS             complement(13011..13385)
                     /locus_tag="MOX77_002386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_452851.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
     gene            13511..14617
                     /gene="asd"
                     /locus_tag="MOX77_002387"
     CDS             13511..14617
                     /gene="asd"
                     /locus_tag="MOX77_002387"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HCA3357901.1"
                     /translation="MKNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQFGQAA
                     PTFGDTSTGTLQDAFDLDALKALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAASTL
                     RMKDDAIIILDPVNQDVITDGLNNGVKTFVGGNCTVSLMLMSLGGLFAHNLVDWVSVA
                     TYQAASGGGARHMRELLTQMGQLYGHVADELATPSSAILDIERKVTALTRSGELPVDN
                     FGVPLAGSLIPWIDKQLDNGQSREEWKGQAETNKILNTASVIPVDGLCVRVGALRCHS
                     QAFTIKLKKEVSIPTVEELLAAHNPWAKVVPNDRDITMRELTPAAVTGTLTTPVGRLR
                     KLNMGPEFLSAFTVGDQLLWGAAEPLRRMLRQLA"
     gene            14993..17179
                     /gene="glgB"
                     /locus_tag="MOX77_002388"
     CDS             14993..17179
                     /gene="glgB"
                     /locus_tag="MOX77_002388"
                     /EC_number="2.4.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-alpha-glucan branching enzyme"
                     /protein_id="HCA3357902.1"
                     /translation="MSSRIDRDVINALIAGHFADPFSVLGMHQTQAGLEVRALLPDAT
                     DVWVIEPKTGRKVGKLECLDARGFFCGVLPRRKNFFRYQLAVTWHGQQNLIDDPYRFG
                     PLIQEMDAWLLSEGTHLRPYETLGAHADTMDGVTGTRFSVWAPNARRVSVVGQFNYWD
                     GRRHPMRLRKESGIWELFIPGAHNGQLYKFELLDANGNLRIKADPYAFEAQMRPETAS
                     MICGLPEKVTPSEERQKANQFDAPISIYEVHLGSWRRHTDNNFWLSYRELADQLVPYA
                     KWMGFTHLELLPVNEHPFDGSWGYQPTGLYAPTRRFGTRDDFRYFINAAHAAGLNVIL
                     DWVPGHFPSDEFSLAEFDGTHLYEHSDPREGYHQDWNTLIYNYGRREVSNYLVGNALY
                     WMERFGIDALRVDAVASMIYRDYSRKEGEWIPNEFGGRENLEAIEFLRNTNRIIGEQV
                     PGAVSMAEESTDFSGVTRPPETGGLGFWYKWNLGWMHDTLDYMKLDPVYRQYHHDKLT
                     FGMLYNHTENFVLPLSHDEVVHGKKSILDRMPGDAWQKFANLRAYYGWMWAFPGKKLL
                     FMGNEFAQGREWNHDASLDWHLLEGGDNWHHGVQRLVRDLNHTYRHHKALHELDFDAY
                     GFEWLVVDDNERSVLIFVRRDKAGNEIIVASNFTPVPRHDYRFGINQPGRWREILNTD
                     SMHYHGSNTGNGGVVHSDEIESHGRQHSLNLTLPPLATIWLMREGE"
     gene            17176..19140
                     /gene="glgX"
                     /locus_tag="MOX77_002389"
     CDS             17176..19140
                     /gene="glgX"
                     /locus_tag="MOX77_002389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen debranching protein GlgX"
                     /protein_id="HCA3357903.1"
                     /translation="MTQLAIGEATPHGATYDGHGVNFTLFSAHAERVELCVFDSRGNE
                     RRYDLPGRRGDVWHGYLAGARPGLRYGYRVHGPWQPAQGHRFNPAKLLLDPYARQVEG
                     ELKDHPLLHGGHDEPDYRDNAAVAPKSVVISDHYDWEDDAAPRTPWGKTVIYEAHVKG
                     LTYLHPELPQEIRGTYKALGHPVMVAYFKQLGITALELLPVAQFASEPRLQRMGLTNY
                     WGYNPMAMFALHPAWASSPETALDEFRDAVKALHRAGIEVILDIVLNHSAELDLDGPT
                     FSLRGIDNRSYYWIRDDGDYHNWTGCGNTLNLSHPGVVEYACECLRYWMETCHVDGFR
                     FDLASVMGRTPTFRQDAPLFAAIKACPVLSTVKLIAEPWDIGEGGYQVGNFPPPFAEW
                     NDHFRDAARRFWLPRNLTTGEFACRFAASSDVFKRNGRAPGASVNLLTAHDGFTLRDC
                     VCFNQKHNEANGEENRDGTNSNYSDNHGKEGLGGPLDLMERRRDSIHALLATLLLSQG
                     TPMLLAGDEHGHSQHGNNNAYCQDNALTWLDWQQANRGLTTFTAALIRLRQQIPALTG
                     NSWWEEGDGNVRWLNKNAQPLSADEWQNGPKLMQILLSDRFLIAINATLEVTDIVLPE
                     GEWRAVPPFAGEDNPVITAVWQGLCVFQRG"
     gene            19155..20450
                     /gene="glgC"
                     /locus_tag="MOX77_002390"
     CDS             19155..20450
                     /gene="glgC"
                     /locus_tag="MOX77_002390"
                     /EC_number="2.7.7.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate adenylyltransferase"
                     /protein_id="HCA3357904.1"
                     /translation="MVSLEKNDRVMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPA
                     VHFGGKFRIIDFALSNCLNSGIRRIGVITQYQSHTLVQHIQRGWSLFSEEMNEFVDLL
                     PAQQRMKGENWYRGTADAVTQNLDIIRCYKAEYVVILAGDHIYKQDYSRMLIDHVEKG
                     ARCTVACMPVPIKEATAFGVMAVDENDKIIDFVEKPANPPAMPGDASKSLASMGIYVF
                     DADYLYELLAADDKDDASSHDFGKDIIPKITREGMAYAHPFPLSCVQSDPQAEPYWRD
                     VGTLEAYWKANLDLASVTPELDMYDQNWPIRTHMESLPPAKFVQDRSGSHGMTLNSLV
                     SGGCIISGSVVVQSVLFPRVRINSFCNIDSAVLLPEVWVGRSCRLRRCVIDRACIIPE
                     GMVIGENAEEDARRFYRSEEGIVLVTREMLRKLQVKQER"
     gene            20450..>20832
                     /locus_tag="MOX77_002391"
     CDS             20450..>20832
                     /locus_tag="MOX77_002391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen/starch synthase"
                     /protein_id="HCA3357905.1"
                     /translation="MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDVRVLLPGF
                     PDIRRGIPDAHVVSRRDTFAGKISLLFGHYNGVGIYLIDAPHLYERPGSPYHDTNLYA
                     YIDNVLRFALLGWVGCEMACGLDPF"
BASE COUNT         4796 a         5245 c         5715 g         5076 t
ORIGIN      
        1 gctgctttct tcctttgaga tagaggcgct ggaagcggcg caggcggcag tacctgaact
       61 gccgcgcggg ttactactgg ataaatggcg tgaagactgg cgtgaactga cgacccgtct
      121 gggctgtgtt tccctccatc tcaaccataa attactcgat gagacgcgag tgcaagagat
      181 taaggccgcg ggtctgcgga ttctggtgta taccgtcaat cagccccagc gggcggcaga
      241 gctgctgcgc tggggcgtgg attgtatctg caccgatcgc attgatgaca tcggccctca
      301 ctttcagttt taagggctga tagttttcag cgggatgtca ggctgcggcg tcccgctgtc
      361 ctgctgcaac attggctggg aatggtttag catccggtcc ggatttccgc tgccgctgag
      421 cattccgccc tgcgtattgg gcagcgtttg ctgaccgagc ataccgttgc ccggctgtcc
      481 ctgctgaacc cgctgcgtat tggcattcaa ctgcgactgt agattttgct gctggctgcg
      541 cgcctgcgtt tgcatctgcg tctgcatacg ctgctggctg gggatttgat aacctggctg
      601 attaggatta ttcatagtgt taattggctg ggccaataca gcaaagggta ataaagccgt
      661 aataagtagt aagcgtttca ttgtcgtctc ctcccgatga ggcctctttt taagtgtacc
      721 tctatttcgc catgatgatg attttttaag cgttgtggac caggattaaa cgggacatac
      781 acccctttat ctggagaaaa acaacgatga aaccaacgtt tatgcgctgg gtggcgatcg
      841 ccgctctgct ggccgggggg acgtttagcg cggtggccaa tcctcccgtc gcgccgccag
      901 tctcctatgg tgttgaagaa gatgtctttc atcctgtacg ggcgacgcaa gggatggtgg
      961 cgtccgtgga tgcaatggcg acgcaggttg gcgtggatat cttaaagcag ggcggtaatg
     1021 ccgtggatgc cgccgtcgcc gtgggctatg cgctggctgt cacgcatccg caagccggga
     1081 atctgggcgg cgggggattt atgctgctgc gcactaaaga tggcgctacc acggcgatcg
     1141 attttcgtga aatggcgccg gctgccgcga cccgtgatat gttcctcgac gatcagggta
     1201 acgccgatgc gaaaaagtcg ctgacgtcgc atctggcatc cggtacgccg ggtaccgtgg
     1261 cgggtttctc gctggcgctg gagaaatacg gcacgatgcc gctgaataaa gtggtgcgtc
     1321 cggcgatgaa gctggcggaa gagggttttg tggttaacga tgcgctggcc gacgacttaa
     1381 aaacttacgg cagcgaagtg atccccaacc atgagaacag caaagccatt ttctggaaag
     1441 acggcgagcc gctgaaaaaa ggcgataagc tgatccagaa gaatctggcg aaaagcctgg
     1501 aaatgattgc cgaaaacggc ccggctgcgt tttataaagg ggcgattgcc gaccagattg
     1561 ccggggaaat gcagaagaac ggcggtctga tgaccaaaga ggatttagcc agctataaag
     1621 ccgttgagcg tacgccaatc agcggtgact atcgcgggta tcaggttttc tccatgccgc
     1681 cgccgtcctc gggcggtatt cacatcgtgc aaatcctcaa tattcttgaa aatttcgaca
     1741 tgaagaagta cggctttggc agcgccgatg ccatgcaaat catggcggaa gcggaaaaat
     1801 acgcctacgc tgaccgctca gagtatctgg gcgatccgga ctttgtgaaa gtgccgtggc
     1861 aggcgctgac caacaaagcc tatgcgaaaa cgttggccga tcaaatagat attaataagg
     1921 caaaaccttc cagccagatc aaaccgggca agctcgcccc gtatgaaagc aaccagacca
     1981 cccacttctc ggtggtggat aaagacggca atgctgtggc ggtgacctat accctgaaca
     2041 ccaccttcgg cacaggaatt gtggcgggaa ataccggtat tctgctgaat aatcaaatgg
     2101 atgatttttc tgctaagcct ggtgtaccca atgtttatgg cctagtgggc ggcgatgcta
     2161 acgcggtcga accaaaaaaa cgtccgctgt cgtcgatgtc gccgactatc gtggtaaaag
     2221 acggccaaac ctggctggtg accggtagcc ctggcgggag tcgaatcatc actactgtgc
     2281 tgcaaatggt agtgaacagc attgattttg gcatgaacgt cgccgaagcg accaacgcgc
     2341 cgcgtttcca tcatcaatgg ttgccggacg aactgcgggt agaaaagggc ttcagccccg
     2401 atacgctgaa gttgctggaa cagaaagggc agaaagtcgc gctgaaagaa gcgatgggca
     2461 gcacccaaag tattatggtt ggaccggatg gcgaactgta cggtgcgtct gacccgcgtt
     2521 ccgtggatga tttaacggcg ggatactgat ttttaattcc aggcccggtg tcagacaccg
     2581 ggctatttgc agattatgcc gtgagtaatc gggctggatt atcaatacaa agcttgcgca
     2641 gagtatcgtt gtctactccg cgagcagcca aataggcgag gaaaacattc gggacaaacc
     2701 cccagccatt tccgccattt ttcgcccaca tctgtttgag aaaaacatca tggcttaaaa
     2761 cgatttggtc ggcgtaaccc agtgcaatca gattcgctac tgcatctgcg gtctcctgaa
     2821 cgcccggcgc gacaccttct tttggaaagg tgatgtccag accaatcatg tcaaattcaa
     2881 gccatacgcc gcggtcgagc attttacgtt gatagacgac atcttttcct gaagggtccg
     2941 aatgcgccag cgagactttt gccggagaga cgttcatttc ttccagcacg atatccagca
     3001 cctcatcacc cagtcgcagc caccctggca tatggatatt catcgccgtg tgggggttgt
     3061 tacattgtgc cagagacgct gcccgcaggc tgttacgctc cgcttgggta aacgcgggag
     3121 atacgccgat ttcaccgatc atgccagcgc gaatatccgt ctcgccaata ccctgattca
     3181 gttctttatc aatgagtgag gctaacagct caacaggttt atggatccgg gtgctttcaa
     3241 atttctccag ataaggcccg gatgacgcaa cgatattcaa acccgttttt aaggcaactt
     3301 ctcgtagcgc tgaggcatcc cgtccaatgg attctgaacc ggtggcgtcg acaatcgtcc
     3361 tgccgcccaa agacataaag ttattgattt cgaagataac atcatcaatc tcttttctgt
     3421 ccatgttatc ggcgcagcag tatgggtcgt gtttcagccc ccactgcagg tcagcactga
     3481 ctttctttcc caccagttgc tgtgaaaaag cataatgtgg ctcgtctacg accgaagaca
     3541 gatcgttaaa cagatgttca tgcggtagcg tcagccccat atccgtatgc gccaccgggc
     3601 ctgttacggt ttgcaggaaa cctttcattc tgacacctcc attttttgcg ccattttgga
     3661 tgctctgtat tcagggatgg tggtcacaat cgcaccgact aacgcgaaca gcgtaccgat
     3721 gatggtgacc aggtagaccg tattgcctaa tgaagggatc aattcatcaa ttagcactga
     3781 gccaagcagt tggcctgctg ttgacgctac gcccagcatc aatagcccta agcctctcac
     3841 cagaatcgcc attagcccga tggatagcag acccagcgga ccaccgagat acatccacca
     3901 tgtatcgggt aactggatgg tgacatggcc taatgcgata cgtatcgcca gcgccgcgcc
     3961 caggacacaa aagccgacga tgaagttcca tgtaatggac accagcatgg agcccgttgc
     4021 ctcggcgact ttcgcattcc ccgcaggctg ccagccagcg agtaaccctg ccaaaaaggg
     4081 gaggatagcg agcaggataa acgaggttga gtgccactgt ggcgacacga caaaaatggt
     4141 ggcgataacg gcgaacaatg cgccagtaat gcgccatggc gtaaaatatt ttttctcctc
     4201 cacgccgatg ccaaaacggt cgcacagcag gccggaaaga agcagagcgg aaattaatgc
     4261 cgtttgaaag gtggcaacgc ccagcgcgct ggcggatgcg ccttcagaaa atacgaccat
     4321 cgccccgcat aatcctgcaa accaattcca tagcgggatt tttctctttt taatcagagt
     4381 agggattgag gcgaattgct ggcgtgtttc tttgcgcgca ataataataa aaaacatgac
     4441 gaccagaccg ctggcaaacg agattactgc gcaagcatta ccgtcttgta accaatgtcc
     4501 taactgccca ttaacggcag actgcatcgg ggaaagcata ccggctaaga tggtggcaag
     4561 catcagtaag ggggttgagt acttattctt gttcatacat caatccttat attttataaa
     4621 aggagtaact ttcgttactc cattgttttt tattttctgg cgatgaattg aagcgtgttg
     4681 acccacaggt cggtataaaa tggccatgac ataaactgct gggttcccca gtgtggggag
     4741 cagtcactca taaagcaggc ggttttaccc tgttggtatt caccgaacac taacaatggg
     4801 tcattattta ttgttaatac gacatcggca tcgtctctgg cgacgacctg gttatatcca
     4861 agaaataccg ggtaatctga gaacccgtta acaacaggat gttcaggtga gacagcctca
     4921 gcacaaatac cctctggctt ttctacccgg tcatcgccgt caagcataat aactggcaga
     4981 acctcagcaa gaacggtgtt cttataattg gcttttgcct caatacccat aaatgacaga
     5041 taaccgccaa tcatgagtag tccaccgcca tttttgacgt actctttaat ggattccaga
     5101 gcgtttggtt ttatttttag ctgatagaag gtttcatttt gtagcaggaa ggtattacta
     5161 ccaatgtcgc taataacaat cacatcataa cgatttaatt cgtcaatact ctctggaaag
     5221 gcaatttgta ccgtgtgggc aggcatgtaa tcaatatcaa cgccgccttt cctcaggcat
     5281 tccagtaacc atgtcgcgcc ttcttcatat ttactggagg tgaaactgtc ataacctttt
     5341 gaatgaatca tatgaatatg ccaggattct ccaataaaga gcacctttag ttttttctgc
     5401 gtattgttca tagtctgctc cttgatttag tgagtagaga tagtttgttt gtaatgtgaa
     5461 ccctgaatac gatgaagaac ggagtcgttt tccggcatat cagaggcatt aggcgtttca
     5521 accgcaagtg aggcaaatgc gctggcgtag cacaatgcgg atgccagtga ctttcctttt
     5581 gcaaggccag atgagagggc gccattgaaa gcgtcacccg ctcccgccgt attttttaca
     5641 actgccggaa atgccgggga atagatgaat tgtgtgccgt cataagcaag cgaacctttg
     5701 ctacctaatg taataatggt atttttgacg cctttctggt gaataatttt ggccgcgcat
     5761 ttggctgatt cgatatcatt aaccgccata ttggccagca ggccggcttc cgtttcattt
     5821 ggcgtaatat agtcaatgtt atcaatgatg gtgttaacca tgtcattgta cggcgctgga
     5881 ttgatgatga ccggtatgtc atttttttgt gcgagacgaa ttgtttgctg cagcgcttcg
     5941 taattcgtct ccagttggac aagaacaata tctgaatgaa caatggcttc tttttgaatg
     6001 gtgatttcat caggggaaat tgtcatgttg gcgccagggt agatagcgat gacattatct
     6061 ccggtatcac cattcaccat gatggttgct gtacctgttt gtgtttcttt ggtctggtag
     6121 ataacacttt tatggatttt tgatgagttt ataaaattaa tggcgtaatc gctaaaatga
     6181 tctgagccga ctttagtaat aaaatgcaca tcagaatcgg catagcttgc tgctaatgcc
     6241 tgattacatc ccttaccgcc gggtgaaaaa ataaatttat cggccagcaa tgattctccc
     6301 gttgagggta atctcggtag ataactgata atatcaacat tgaacgagcc aataacacat
     6361 acattatttt tcatggcaga gagacctttt tttattttct gcgctgattc atatttttcc
     6421 agcacataag caatttcatt ttttgcgacg ttatcaagag aatcaagggt aataaatgca
     6481 ccaccatgac agcgagtaag atatccctgt ccggcaagtt cattgagatc tgaacgaata
     6541 gtttcctttg ttaccttgag acttttcgcc agatttgaaa cttttacaac tcccgaaata
     6601 ctgagttcct tcaatattct atgatggcgt tcaaatttca ttttttacct caccgtggtt
     6661 aaattagtcc cgggaggagt atattgttgt gattgtcacc ataaagtgat ggcagaaacc
     6721 aaaaaaaaac aaaaatgtaa tattaatatt gctaaaatta cggaaaaaac ggtgataaag
     6781 cttaaagtgg taataaccat gaaattcaag tggttattgt tttgatatag gggaagtagg
     6841 ctgcaataac tggaatgttg tgaaggtttg tgacgtttcg ccccacaggg tggggcgggg
     6901 aagcgctatt tcacgcgcgc cataaagtac gtatcaacgt actcaccgtt gcgcaggccg
     6961 tatttcttac cggtgccttc gatttcaaag ccgtacttct tatacaccgc caccgcgggc
     7021 tcgttatcaa caaacaccgt taactcaata cgctcgacgc gcagccagtt gtcacacatg
     7081 tcgatcatcg tgcggatcag cgcgctggca atgccgcgat tgtgccaccg ggcatccacg
     7141 cagataccaa aatcggccac gtggctgcga cggggacgtt gggtgacctg aatagaaaga
     7201 tggccaacga caatatcgtc aatgcaggca accagttgtt taaccccggc ttgctcggtt
     7261 agccgcgcct gccacatttc gagggaagga tgaggaacct gtagcgtgtt gtggtacacc
     7321 tccggctggg cgtggatctg acgaatggcg tcgtaatctt tcggttcagc gtggcgtatc
     7381 actatttcac tcattcctta tctcctgcag ggttaattgt gtatttacac tcgctgagaa
     7441 agaaaattcc gtcaaccgca tttttttgca aaaagaagta gacaagtgcg aatgagaatg
     7501 attattattg ccttgcattc aggggaaccc ctacggataa cctgaaagca tgacattgct
     7561 cacattgctt ccagttttat tttggccagc ttttgctggc tttttttttg gttttgtttc
     7621 agcctggctt acttgtcatt ttgtccccgg gaagtgctcg tgctcctcac gtacatttag
     7681 tacgctccgg gccctgcgcg cttgccgtga acaaactgac cgcgacgctg acggccgatc
     7741 ttgaggcatc tgcttttgta ggcccgaaaa ggcttctccg ccaccgtcaa agaatccaac
     7801 attcagtctc ctcacgcttt gcgctatggt gtaaacaatc atcttcaaaa ggatcgtctc
     7861 atgaccttac actgcgcatt tattggattc ggcaaaagta ccacccgtta ccatctcccc
     7921 tacgttctga atcgtaaaga tacctggcat gtcgcgcata ttttccgtcg tcacgctaaa
     7981 ccggaagagc aggcgccgca gtattcgcat attcacttca ccagcgatct ggatgaggtg
     8041 ttgggcgatc cgcaggtaaa actggtgatc gtctgtacgc atgctgacag ccatttcgaa
     8101 tacgccaaac gcgcgctgga agcgggtaaa aatgtgctgg ttgagaaacc tttcacgccg
     8161 acgctggcgg aggcaaaagt gttgttcgaa ctggcgcgaa gcaaaggact gaccgtcacg
     8221 ccatatcaga atcggcgttt tgattcctgt tttctcactg ctaaaaaagc gattgagagc
     8281 gggaaactgg gcaagattgt cgaaattgaa agccatttcg attattaccg cccggtagca
     8341 gaaaccaaac cgggcctgcc gcaggatggc gcattctatg gacttggcgt ccacactatg
     8401 gatcaaatta tttcgctatt tggccgcccg gatcatgtcg cgtatgacat tcgtagcctg
     8461 cgtaataaag cgaatccgga tgacaccttt gaagcgcaat tgttctacgg tgccctgaaa
     8521 gccattgtga aaaccagcca tctggtgaaa atcgactatc cgaagtttat tgttcacggc
     8581 accaaaggtt cgtttgtgaa atacggtatc gatcaacaag aaaccagcct gaaagcgaac
     8641 attatgcctg gcgagccggg ttttgccgct gacgaatccg tcggtgtgct ggaatatgtt
     8701 aacgatgaag gcgttacggt gaaagaagag gtgaaaccgg aaacgggtga ctatggtcgc
     8761 gtctatgatg cgctgtacca gacgttgacc atcggtacgc ctaattatgt caaggaatct
     8821 gaagttctta ccaatctgga aatcctcgaa cgtgccttcg aacaggcaac gcctgcgacg
     8881 ataaccctcg ctaaatagcc cttacagact cctctgcgct tattcatatt ttttgaacag
     8941 aggagtcaat tttcaccctc tatgatcccg gacggaatga gtccacactt attccatcga
     9001 aaacatctgg gggtgaacac aatgatctac ttacgcaaag caaacgaccg cggtcatgcg
     9061 aatcatggct ggcttgactc ctggcatacc ttttcttttg ccgattatta cgatccgaac
     9121 tttatggggt tctcggcgct acgtgtgatt aacgacgatg tgatcgacgc aggccagggt
     9181 ttcggcacgc atccgcataa agacatggaa attttgacct atgtgctgga aggtgctgta
     9241 gaacaccagg acagtatggg caataaagaa caggttccgg caggtgaatt ccagattatg
     9301 agcgccggga ccggcgttcg ccactccgag tacaacccga gcaaaacgga tcgtctgcgg
     9361 ctgtaccaga tctggatcat tccgcaagaa acaggcatca cgccgcgcta cgaacagcgc
     9421 cgcttcgacg ccgcgcaggg caagcaactg gtgctttcgc cagatgctcg cgatggttcg
     9481 ctgaaggtcc accaggatat ggagctgtac cgctgggcgc tgctcaaaga tgagcaatcg
     9541 gtgcatcaga ttgccgccga gcgccgcgtc tggatacagg tggtaaaagg taacgtgacc
     9601 attaacggta ccaaagcgac gaccagcgac ggcctggcga tttgggatga gcaggcaatc
     9661 tcgattcatg ccgacagcga cagtgaagtg ttactgtttg acctgccgcc agtctaaaaa
     9721 tacacgtcat ccttcaagct gcatctgtgt tggctttatt actcggccca tccataggcc
     9781 tcgccccttc ggggccgctg cgagcagcgt tcaaatctgc tcccggcaga tttgtcgctc
     9841 accccggtcg cgtacttaat gtacgctccc ggggatttac tgagggacat ccttgtccct
     9901 caccagaggc aaccttcggt tgttcaaatt cgttcctgac gaatttgtca ctgcgtcgcc
     9961 gccttgatgc aactcgaatg attttgtgta tttctcataa taaaaactcc tttttctctg
    10021 cgaaggttca cgcacgtccg tggtaaactg gggaaatcta tcccttttta acgcttcagg
    10081 acgatgaaaa agaaaagacc cgtacttcag gatgtagccg accgcgtggg cgtgaccaaa
    10141 atgacggtca gccgcttttt gcgtaacccg gagcaggtct ccgtggcgct gcggggcaaa
    10201 attgccgctg cacttgatga gctgggttat attcccaatc gcgctcctga tatcctttct
    10261 aacgccacca gtcgcgctat cggcgtgctg ttaccgtctc tcaccaacca ggtctttgcg
    10321 gaagtgttac gcggcattga ggccgtcacc gatgcccacg ggtatcagac catgctggcg
    10381 cactacggct ataaaccgga gatggagcag gagcgcctgg aatcgatgct ctcctggaat
    10441 atcgacggtc ttatcctcac agaacgtacc catacgccgc gcaccttaaa aatgatcgaa
    10501 gtcgccggga ttccggtggt ggaactgatg gacagccagt cgccgtgtct cgatattgcc
    10561 gttggttttg acaacttcga ggccgcccgt cagatgaccg ccgcgattat cgcgcgtggt
    10621 catcgtcata tcgcctatct gggggcgcgc ctcgacgaac gtactatcat caagcagaag
    10681 ggctatgaac aggcgatgcg ggacgccggc ctggttcctt acagtgtgat gatggagcaa
    10741 tcttcatcct actcttccgg tatcgaactc atgcgccagg cgcgacgcga atacccacag
    10801 cttgacggta ttttttgcac caacgatgac ctggcggtgg gggcggcctt cgaatgccag
    10861 cgcctggggc taaaaatccc ggacgacatg gcgatcgccg ggttccacgg tcatgacatc
    10921 ggccaggtga tggaaccgcg tctggcaagc gtcctgacgc cgcgcgagcg aatgggcagc
    10981 attggcgcgg aacgtctgtt ggcccgcatt cgcggcgaaa cggtcacgcc gaaaatgtta
    11041 gatttaggtt tcaccttgtc accgggcgga tctatttagt ctgacaactt tgaagtagct
    11101 cacacttatt cacttttggc acgaatggtc attgcgtcgt gaatggtgcg gttggacaat
    11161 gttaccgata acagttaccc gtaacaaatt ttgcaacttg tagagtgggg tcccgctttg
    11221 agcacgacta atcatgatca ccacgtttac gttctgatgg gcgtatcagg cagcggtaaa
    11281 tccgctgtcg caagcgccgt ggcgcatcag cttcatgccg cgtttctgga cggcgatttt
    11341 ctgcatccgc gctgcaatat tgaaaaaatg gcttccggcg agccgttgaa tgatgatgac
    11401 cgcaaaccgt ggttgcaggc gctgaacgac gccgctttcg cgatgcagcg taccaataaa
    11461 atctcgctga ttgtctgttc cgcactgaaa aaacactatc gcgacctgct gcgcgaggga
    11521 aacccgaatc tctcctttat ctatctgaaa ggtgatttcg acgtcattga aagccgtctg
    11581 aaagcgcgca aaggtcattt cttcaaaacc cagatgctgg tgacgcagtt tgaaacgctg
    11641 caagagccgg gtgccgacga acgcgatgtt ctggtggtgg atatcgacca gccgctggaa
    11701 ggcgttgtgg cgagcaccat tgaggtcatc aataaaggca gtacgctgtg agtacattaa
    11761 cactggtttt aaccgccgtc ggttccgtct tactgctgct gtttctcgtg atgaaggcgc
    11821 gtatgcacgc cttcgtcgcg ttaatggtcg tctcaatggg cgcggggctt ttttcaggga
    11881 tgccgcttga taaaatcgcc gcgaccatgg aaaaagggat gggcggcacg ctgggcttcc
    11941 tggcgattgt ggtcgcgctg ggggcgatgt tcggtaaaat tctgcatgaa accggcgcgg
    12001 tcgatcagat agccgtgaaa atgcttaaat cctttggcca taaccgcgcg cactatgcga
    12061 ttggccttgc cgggctgatt tgcgcgctcc cgctattctt tgaagtggcg attgtgctgc
    12121 tgataagtgt ggcgttctct atggcgcgtc ataccggcac aaacctggtg aagctggtca
    12181 ttccgctgtt tgcgggcgtg gcggcagccg cggcgttttt gttgcctggg cctgcgccga
    12241 tgctgctggc ttcccagatg catgctgatt tcggctggat gatcctgatt gggctgtgcg
    12301 ccgccattcc tggcatgatt atcgccgggc cgctgtgggg gaattttatc agccgttacg
    12361 ttgagctgcg tattcctgac gacattaccg agccgcatct gggcgaaggc aaaatgcctt
    12421 ctttcggctt cagcctgtcg ctgatcctgc tgccgttggt gctggtagga ctgaaaacga
    12481 tcgccgcgcg ctttgtgccg gaaggttcca ccgcttatga atggtttgag tttatcggcc
    12541 accccttcac tgcgattctg gtcgcttgtc tggtagcgat ttacggcctg gcgatgcgcc
    12601 aggggatgcc gaaagacaaa gtgatggaaa tctgcggcca cgcgctacaa ccggcgggca
    12661 ttattctgct ggtgattggc gcaggcgggg tgttcaaaca ggtactggtt gactccggcg
    12721 tcggcccggc gctgggcgaa gcgttaaccg gtatgggact gccgattgcc attacctgct
    12781 ttgtgctggc ggcggcggtg cgcatcattc agggttccgc gaccgtggcg tgtttaaccg
    12841 cggtcggtct ggtgatgccg gtcattgagc aactgaattt ctccggcgcg cagatggcgg
    12901 cgctctctat ctgtatcgcc ggcggttcaa ttgtggtttc tcatgttaac gacgctggct
    12961 tctggctgtt cggtaaattt accggcgcga ccgaagcgca gacgctgaag acctggacga
    13021 tgatggaaac tatcctcggc acggtcggcg cgattgtcgg gatgattgct ttccaactgc
    13081 tgagctgagt cttgttgccc ggtggcgctg tgcttaccgg gcctggaaac gggcacatat
    13141 cgataccgta agccgggtaa ggcgtaatcg ctacccggtt tttttattga ggtgtgcatg
    13201 gcaatcgccc aacgacattt tgcctcgcca tgtttcagta cgcgcataaa agcaggcaaa
    13261 tttctacgct gatccataat taggatcaat aaaacagcga cggaaatgat tcccttccta
    13321 acgcaaattc cctgataatc gccactggac tttctgcttg cgcggtaagg caggataagt
    13381 cgcattactg atggcttcgc tatcattgat taatttcact tgcgactttg gctgcttttt
    13441 gtatggtgaa ggatgcgcca caggatactg gcgcgcatac acagcacatc tctttgcagg
    13501 aaaaaacgct atgaaaaatg ttggttttat cggctggcgc ggaatggtcg gctctgttct
    13561 catgcaacgc atggtagagg agcgcgattt cgacgctatt cgccctgttt tcttttctac
    13621 ctcccagttt ggacaggcgg cgcccacctt cggcgacacc tccaccggca cgctacagga
    13681 cgcttttgat ctggatgcgc taaaagcgct cgatatcatc gtgacctgcc agggcggcga
    13741 ttataccaac gaaatttatc caaagctgcg cgaaagcgga tggcagggtt actggattga
    13801 cgcggcttct acgctgcgca tgaaagatga tgccattatt attctcgacc cggtcaacca
    13861 ggacgtgatt accgacggac tgaacaatgg cgtgaagacc tttgtgggcg gtaactgtac
    13921 cgttagcctg atgttgatgt cgctgggcgg tctctttgcc cataatctcg ttgactgggt
    13981 atccgtcgcg acctatcagg ccgcctccgg cggcggcgcg cgccatatgc gcgagctgtt
    14041 aacccaaatg gggcagttgt atggccatgt cgccgatgaa ctggcgacgc cgtcttccgc
    14101 aattcttgat attgaacgca aagttacggc attgacccgc agcggcgagc tgccggtgga
    14161 taactttggc gtaccgctgg cgggaagcct gatcccctgg atcgacaaac agcttgataa
    14221 cggccaaagc cgcgaagagt ggaaaggcca ggcggaaacc aacaagatcc tcaatactgc
    14281 ctctgtgatc ccggttgatg gtttgtgcgt gcgcgtcggc gcgctgcgct gtcacagcca
    14341 ggcgttcacc attaagctga aaaaagaggt atccattccg acggtggaag aactgctggc
    14401 ggcacataat ccgtgggcga aagtggtgcc gaacgatcgt gatatcacta tgcgcgaatt
    14461 aaccccggcg gcggtgaccg gcacgttgac tacgccggtt ggtcgtctgc gtaagctgaa
    14521 catggggcca gagttcttgt cggcgtttac cgtaggcgac cagttgttat ggggcgccgc
    14581 cgagccgctg cgtcgaatgc tgcgccagtt ggcgtagtgg ctattgcagc gcttatcggg
    14641 cctgcgtgtg gttctgtagg ccggataagg cgtgtcagcg ccgccatccg gcaatatccg
    14701 ccagataagg cgtagtcggc aagcagacgt cagattgata tgtagggtgc atcgtcacct
    14761 ttttttgcgt aatacaggag taaacgcaga tgtttcattt ttatcaggag ttaagcagag
    14821 cattggctat tctttaaggg tagcttaatc ccacgggtat taagcctaac ctgaaggtag
    14881 gacgacgcag ataggatgca cagtgtgctg cgccgttcag gtcaaagaag tgtcactacc
    14941 tgatgttgaa ttcagtgaga tggagtgacg ccacaaaaca ggataacaaa ccatgtccag
    15001 tcgtatcgat agagacgtga ttaatgcgct aattgcagga cattttgcgg accctttttc
    15061 cgtactcgga atgcaccaga cccaagccgg actagaagtc cgcgccctat tacctgacgc
    15121 caccgacgta tgggtgattg aacccaaaac cggacgtaaa gtcggcaaac tggaatgtct
    15181 cgacgctcgc ggttttttct gcggcgtttt accccgacgt aaaaatttct ttcgctatca
    15241 gctcgccgtg acctggcacg gacagcagaa cctcatcgac gatccttacc gttttggtcc
    15301 attaatacag gaaatggatg cctggctatt gtcggaaggc acccacctgc gtccttatga
    15361 aacgctgggc gcgcacgccg atacgatgga tggcgtcacc ggcacccgtt tctccgtctg
    15421 ggcgcctaat gcccgtcgcg tttcggttgt cgggcaattc aactattggg atgggcgtcg
    15481 ccacccgatg cgtctgcgca aagagagcgg tatttgggag ctgtttatcc ccggcgcgca
    15541 taatggacaa ctgtataaat tcgagctgct tgatgcgaac ggtaatctgc gcattaaagc
    15601 cgatccctat gcttttgagg cgcagatgcg tccggaaacg gcgtcgatga tttgcggact
    15661 gccggagaaa gtgacgccaa gcgaagaacg acaaaaagcc aatcagtttg atgcgccgat
    15721 ctcgatttat gaggtgcatt taggttcatg gcgccgccat acggataaca atttctggct
    15781 gagctatcgt gagctggcgg atcagcttgt gccttacgcc aaatggatgg gctttacgca
    15841 ccttgaactc ttgccggtta acgaacatcc gtttgacggc agttggggct accagccgac
    15901 cggcctctac gcgccgaccc gccgctttgg tacgcgggac gacttccgct atttcatcaa
    15961 tgcggcccat gcggcgggcc ttaacgtcat tctcgactgg gtgccgggcc atttcccgtc
    16021 cgatgaattt agcctcgcgg agtttgacgg cacccacctc tatgagcata gcgacccgcg
    16081 cgagggctat caccaggact ggaatacgct gatctacaac tatggtcgtc gtgaagtcag
    16141 taattatctg gtgggtaacg ccctgtactg gatggagcgt tttgggattg atgcgctgcg
    16201 tgtcgatgcg gtggcctcta tgatctaccg cgactacagc cgcaaagagg gcgagtggat
    16261 accgaacgag ttcggcggtc gtgaaaacct ggaagccatt gagtttctgc gtaataccaa
    16321 ccgcattatt ggcgagcagg tgcccggcgc ggtcagcatg gcggaagagt cgacagactt
    16381 ctctggcgtg acgcgtccac cggaaacggg tgggctgggg ttctggtaca agtggaatct
    16441 gggctggatg cacgacacgc tggactacat gaagctggac ccggtgtacc gccagtatca
    16501 tcacgacaag ctgacctttg gtatgttgta caaccatacc gaaaactttg ttctgccgct
    16561 gtcgcacgat gaggtggttc acggcaagaa atccattctc gatcgtatgc cgggcgatgc
    16621 gtggcaaaaa ttcgccaacc tgcgcgccta ttatggctgg atgtgggcct tccccggcaa
    16681 gaaactgctg tttatgggga atgagtttgc ccagggacgc gagtggaacc atgacgccag
    16741 cctcgactgg cacctgctgg aggggggcga taactggcac cacggggttc agcgtctggt
    16801 gcgcgatctc aaccacacct atcgccacca taaagcgttg catgagctgg atttcgatgc
    16861 ttacggcttt gagtggctgg tggtcgatga caatgaacgc tcagtactga tttttgtacg
    16921 ccgtgataaa gccggtaacg agatcatcgt cgccagcaac tttacgcccg ttcctcgcca
    16981 cgactaccgc tttggcatca accagccggg acgctggcgt gaaattctca atactgattc
    17041 gatgcattat cacggtagca acaccggcaa tggcggtgtg gtgcacagcg atgagatcga
    17101 aagccatggc cgtcagcact ctcttaacct gacgttaccg ccgttggcga cgatctggct
    17161 gatgcgggag ggggaatgac gcagcttgcg atcggcgaag caacgccgca tggcgcaacg
    17221 tatgacggtc atggcgtgaa tttcacgctc ttttccgccc atgcggagcg cgtagagctg
    17281 tgcgtttttg attcccgagg gaatgagcgt cgctatgacc tgccaggacg tcgcggcgat
    17341 gtctggcatg gttatctggc aggcgccagg ccaggtttgc gctatggcta tcgcgtacat
    17401 ggcccgtggc agccagcgca ggggcatcgg tttaatccgg cgaagttact gcttgaccct
    17461 tatgcgcgcc aagtcgaggg cgaactaaaa gatcatccgc tgttgcacgg cggacacgat
    17521 gaaccggact accgcgataa cgcggcggtg gcgccgaaaa gcgtggtaat cagcgaccat
    17581 tatgactggg aagatgacgc cgcgccgcgc acgccgtggg gaaaaacggt catctatgaa
    17641 gcgcatgtca aagggcttac ctatctgcat ccggaactcc cccaggagat acgcggcacc
    17701 tataaagcgc tcggtcatcc ggtcatggtg gcgtacttca aacagcttgg cattacggcg
    17761 ctggaactgt tgccggtggc gcagtttgcc agcgagccgc gtctgcaacg tatggggctg
    17821 accaattatt ggggttataa cccaatggcg atgtttgcgc tgcatcccgc ctgggccagt
    17881 tcgcccgaga cggcgctgga cgagtttcgc gatgcggtga aagcgctgca tcgcgcgggg
    17941 attgaggtca ttctggacat cgtattaaac catagcgccg agctggatct ggacggtcca
    18001 accttctccc tgcgcggaat tgataaccgt agctattatt ggataaggga cgatggcgat
    18061 tatcacaact ggacggggtg cggcaacacg ctcaatttaa gccatcccgg cgtggtggaa
    18121 tacgcgtgcg agtgtttgcg ctattggatg gaaacctgtc atgtcgatgg ttttcgtttt
    18181 gatttggcgt ccgtcatggg gcgcacgccg acgtttcgcc aggatgcgcc gctgttcgcc
    18241 gcgattaaag cgtgtcctgt gttatcaacg gtcaagctga ttgctgaacc gtgggatatt
    18301 ggcgagggcg gctatcaggt cgggaatttt ccgccaccgt ttgccgagtg gaacgatcat
    18361 tttcgcgatg cggcccgccg attctggttg ccgcgtaacc tgacgaccgg ggagtttgcc
    18421 tgtcgtttcg ccgcttccag cgatgtgttt aaacgcaatg gccgcgcgcc cggcgcctct
    18481 gtcaatctgc tcacggcgca tgacggtttt acgctccggg actgcgtctg tttcaatcag
    18541 aaacacaatg aggcgaacgg tgaggaaaat cgcgacggca ccaacagcaa ttacagcgac
    18601 aatcatggta aagaaggatt aggcggtccg cttgatttaa tggagcggcg gcgcgacagc
    18661 attcatgccc tgctggcgac gctactgctc tctcagggaa cgccgatgct gctggcaggc
    18721 gatgaacacg gccatagcca gcacggcaac aataacgcct actgtcagga taatgcctta
    18781 acctggctgg actggcagca ggcaaatcgt gggttaacca cgtttaccgc cgcgctgatt
    18841 cgtttgcgtc agcagatacc ggctttaacc ggcaatagct ggtgggaaga aggcgatggc
    18901 aacgtgcgtt ggctaaataa aaacgcgcaa cccttgagtg cggatgagtg gcaaaacgga
    18961 cctaagctga tgcaaattct gttgtcggac cgttttctga ttgcgataaa tgccacgctt
    19021 gaggtgacag atatagtttt acccgaaggg gaatggcgcg ccgttccccc attcgctgga
    19081 gaggataatc cggtgataac ggcggtctgg cagggactgt gtgtgttcca gagaggataa
    19141 aaaaggagtt aatcatggtg agtttagaga agaacgatcg tgtaatgttg gcgcgccagc
    19201 tgccattgaa atctgttgcc ctaatcctgg ccggcggccg cggcacgcgt ctaaaagatt
    19261 taacgaacaa acgcgccaaa ccagccgtcc actttggtgg gaagttccgc atcatcgatt
    19321 tcgccttatc taattgtctg aactccggga ttcgccgtat cggcgtgatc actcagtatc
    19381 agtcccacac gctggtgcag catattcagc gcggctggtc actgtttagc gaagagatga
    19441 acgaatttgt cgatctgctg ccagcccaac agcgtatgaa gggcgaaaac tggtatcgcg
    19501 gcacggcaga cgcggtgacc cagaacctgg atattattcg ttgctataaa gcggaatatg
    19561 tcgtcatcct ggcaggcgat catatctaca agcaggacta ctcgcgtatg ttgatcgatc
    19621 acgttgaaaa gggcgcgcgt tgcacggtgg cctgtatgcc ggtgccgatc aaagaagcga
    19681 cggcgttcgg cgtgatggcg gtcgatgaaa acgacaagat tattgatttt gtcgaaaaac
    19741 cggcgaatcc ccccgcaatg cctggtgacg ccagcaaatc gctggccagt atgggcattt
    19801 acgtttttga cgccgattac ctgtatgaat tgttggcggc agacgataaa gatgacgctt
    19861 ccagccacga tttcggtaaa gacattatcc ccaaaatcac ccgcgaaggt atggcttacg
    19921 cgcatccttt cccgctctcc tgcgtgcagt ccgatccaca agccgaaccg tactggcgtg
    19981 atgtaggtac gctggaagct tactggaagg cgaacctgga tttagcctcg gtgacgccgg
    20041 agctggatat gtatgaccag aactggccta tccgtacgca tatggaatcg ctaccgcctg
    20101 cgaaattcgt gcaggaccgc tccggtagcc acggtatgac gctgaactcg ctggtctccg
    20161 gcggctgcat tatctctggt tcggtggtgg tgcaatctgt gctcttccca cgggtgagaa
    20221 taaattcttt ttgtaatatt gattcggcag tgttgttacc tgaggtttgg gtagggcgct
    20281 cctgccgttt acgtcgctgt gttattgacc gtgcctgtat tatcccggaa ggcatggtga
    20341 ttggtgaaaa tgcggaagag gacgctcgtc gtttctaccg ttcagaagaa ggtattgtac
    20401 tggtcacgcg tgaaatgctg cgcaaactgc aggtcaaaca ggagcgataa tgcaggtttt
    20461 acatgtatgt tcagagatgt tccccctgct gaagactggg gggctggcgg atgtgatagg
    20521 cgcgttgcct gcggcacaaa ttgcggatgg tgttgatgtt cgcgttctgc ttcctgggtt
    20581 tcccgatatc cgtcggggga tacccgatgc gcatgtggtg agccgccgcg atactttcgc
    20641 aggtaagata tcgctgctgt tcgggcatta taacggcgtg ggcatttatc tgatcgacgc
    20701 gccgcatctg tacgagcgtc caggcagtcc ctatcacgat acgaatttat atgcctatat
    20761 cgataacgtg ctgcgctttg ccctgttagg gtgggtcggc tgtgaaatgg cctgcggact
    20821 tgatccattc tg
//
LOCUS       DAGWFR010000064        20552 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.065, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000064 DAGWFR010000000
VERSION     DAGWFR010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 20552)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20552)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20552
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.065"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..396
                     /gene="zipA"
                     /locus_tag="MOX77_002392"
     CDS             <1..396
                     /gene="zipA"
                     /locus_tag="MOX77_002392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZipA"
                     /protein_id="HCA3357906.1"
                     /translation="NVAAHHGSELNGEVLLNSIQQSGFKFGDMNIFHRHLSPDGSGPA
                     LFSLANMVNPGTFDPEMTDFTTPGVTIFMQVPSYGDALQNFKLMLQSAQHIADEVGGV
                     VLDDQRRMMTPQKLREYQDRIREVMDANA"
     gene            468..2483
                     /gene="ligA"
                     /locus_tag="MOX77_002393"
     CDS             468..2483
                     /gene="ligA"
                     /locus_tag="MOX77_002393"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HCA3357907.1"
                     /translation="MEPIEQQLTELRTTLRHHEYLYHVMDAPEILDAEYDRLMRELRE
                     LEAQRPDLITPDSPTQRVGAAPLTAFNQIRHEVPMLSLDNVFDEESFLAFNKRVQDRL
                     KSTENVIWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLH
                     GDNIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKR
                     PLTFFCYGVGILEGGELPDTHLGRLLQFKAWGLPVSDRVTLCDSPQAVLDFYHNVEKD
                     RPTLGFDIDGVVIKVNSLALQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRT
                     GAITPVARLEPVQVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVL
                     SERPEETRPIVFPTHCPVCGSDVERVEGEAVTRCTGGLICGAQRKESLKHFVSRRAMD
                     VDGMGDKIIDQLVEREYVHTPADLFRLTAGKLTGLDRMGPKSAQNVVNALEKAKATTF
                     ARFLYALGIREVGEATAAGLAAYFGTLEALQAATIDELQKVPDVGIVVATHVFNFFAE
                     ESNRDVIGQLLAEGVHWPAPVVINAQEIDSPFAGKTVVLTGSLSQMSRDDAKARLVAL
                     GAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGITVIDEAEMIRLLGA"
     gene            2485..2703
                     /locus_tag="MOX77_002394"
     CDS             2485..2703
                     /locus_tag="MOX77_002394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3820 family protein"
                     /protein_id="HCA3357908.1"
                     /translation="MEKEQLLEIANTVMPFGKYQGRRLIDLPEEYLLWFARKDQFPAG
                     KLGELMQITLLIKTEGLTQLVQPLKRPL"
     gene            complement(2700..3698)
                     /locus_tag="MOX77_002395"
     CDS             complement(2700..3698)
                     /locus_tag="MOX77_002395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461360.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter"
                     /protein_id="HCA3357909.1"
                     /translation="MKLFRILDPFTLTLITVVLLASFFPAEGGFVPVVEGITTAAIAL
                     LFFMHGAKLSREAIIAGGSHWRLHLWVMCSTFVLFPVLGVLFAWWAPVNVDPMLYSGF
                     LYLCILPATVQSAIAFTSLAGGNVAAAVCSASASSLLGIFLSPLLVGLVMNIHGAQGS
                     LEEVGKIMLQLLLPFVLGHLSRPWIGNWVARNKKWIAKTDQTSILLVVYSAFSEAVVN
                     GIWHKVGWGSLLFIVVVSLILLAIVIAINVFVARKCGFNKADEITIVFCGSKKSLANG
                     IPMANILFPTSVLGMMVLPLMIFHQIQLMVCAGLARRYKRQTEKLQAQQESRAAKA"
     gene            3788..4714
                     /locus_tag="MOX77_002396"
     CDS             3788..4714
                     /locus_tag="MOX77_002396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCA3357910.1"
                     /translation="MNYSLRQLRIFITVAQAKSFSRAGDRIGLSQSAVSHSVKELERQ
                     TGVRLLDRTTREVVLTEAGQQLATRLERVLDELNSILRDAGRVGTQLTGTVRVAASQT
                     ISAHLIPQCIAQSNSLYPAIDFVLHDRPQQWVLESIRQGEVDFGIVIDPGAAVDLQCE
                     AILSEPFLLLCRQDHPLAHQEWVSWQDLKQASLVLQDYASGSRPLIDAALAHFAIEAD
                     IVQEIGHPATLFPMVEAGIGISVLPALALPLPQGSHLQVKRLTPVVERQLMLARRKNR
                     SLSTAAQALWDVVRTQASELTAARAKDPLYQL"
     gene            complement(4776..5537)
                     /locus_tag="MOX77_002397"
     CDS             complement(4776..5537)
                     /locus_tag="MOX77_002397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357911.1"
                     /translation="MKKILTLTLSSLLIIPALTHAEFKGGFADIGLHYLDWTSDTTEK
                     TSKKSHKDDFGYLELEGGANFSWGEMYGFFDWENFYNGRHAKPSSEQRYTFKNTNRIY
                     LGDTGLNLYLHAYGTYGSPHRANFHDDMFLYGLGYNFTGNGYWFKPFFAKRYTDQTYY
                     TGDNGYVLGWVAGYSFSLGSEKFSVTNWNEYEFDRDASYAAGNGGKDGINGAVALWWN
                     ATPHLTAGVQYRYADNKLGESFLQDGIIYSIKYLF"
     gene            5793..6626
                     /gene="xapA"
                     /locus_tag="MOX77_002398"
     CDS             5793..6626
                     /gene="xapA"
                     /locus_tag="MOX77_002398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_448816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthosine phosphorylase"
                     /protein_id="HCA3357912.1"
                     /translation="MPHALFSHNPEYCIDIIHAHKPAFTPRVAFILGSGLGALADQIE
                     DAVAISYEKLPGFPVSTVHGHAGELVLGHLAGVPVACMKGRGHFYEGRGMAVMTDAIR
                     TLKLLGCEVLFCTNAAGSLRPEVGPGSLVALSDHINTMPGTPMVGPNDDRYGDRFFSL
                     ANAYDADYRAMLQSVAAEKGFPLTEGVFVSYPGPNFETAAEIRMMQIIGGDVVGMSVV
                     PEVISARHCGLKVVAVSAITNLAEGLGDVKLSHAQTLAAAELSRQNFINLICGFLRKL
                     A"
     gene            6681..7937
                     /locus_tag="MOX77_002399"
     CDS             6681..7937
                     /locus_tag="MOX77_002399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside permease"
                     /protein_id="HCA3357913.1"
                     /translation="MGITSRLKVMSFLQYFIWGSWLVTLGSYMINTLDFTGANVGMVY
                     SSKGLAAIIMPGIMGIIADKWLRAERAYMLCHLVCAGALLYATTVTDPQTMFWVMLVN
                     AMAYMPTIALSNSVSYSCLAKAGQDPVTSFPPVRVFGTIGFIVAMWTVSLMGLELSSA
                     QLYIASGASLLLALYALTLPKIPVAEKKANTTLVSKLGLDAFVLFKNPRMAIFFLFAM
                     MLGAVLQITNVFGNPFLHDFARNPEFADSFVVKYPSILLSVSQMAEVGFILTIPFFLK
                     RFGIKTVMLMSMLAWTLRFGFFAFGDPSPFGFVLLLLSMIVYGCAFDFFNISGSVFVE
                     QEVDSSIRASAQGLFMTMVNGVGAWIGSLLSGMAVDYFSIDGVKDWQTIWLVFAAYAL
                     ALAVIFALFFKYQHHPEKLSTKSLAH"
     gene            7996..8154
                     /locus_tag="MOX77_002400"
     CDS             7996..8154
                     /locus_tag="MOX77_002400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000658729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1427 family protein"
                     /protein_id="HCA3357914.1"
                     /translation="MKEIILSSGIGFGIGAFFTLCRIPIPAPNVLPGVLSIVFMYIGY
                     LVVKSIFY"
     gene            8206..9090
                     /locus_tag="MOX77_002401"
     CDS             8206..9090
                     /locus_tag="MOX77_002401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCA3357915.1"
                     /translation="MERAHRIDLKLLRYFLAVAEELHFGRAAARLNMSQPPLSIHIKE
                     LEQQLGTLLFIRHSRSVALTHAGKVLMEESRRLLANANQALARVEQIGRGEAGRIELG
                     VVGTALWGRMRPAMRHFLKANPNVEVLFREKSPGMQMALLERRELDAGIWRMAIEPAV
                     GFTSIRLHESAFMVAVPEDHDLASRDSVPLSALRNEYFVTLPSVHSDWGFLQRVCQQA
                     GFSPMIIREVVEPQTVLAMISMGIGITLMADGYAQMSWPGVVFRPLEERIPADLYIVY
                     DQQQATPALEKLVAALTV"
     gene            complement(9253..9328)
                     /locus_tag="MOX77_002402"
     tRNA            complement(9253..9328)
                     /locus_tag="MOX77_002402"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9293..9295),aa:Lys,seq:ttt)
     gene            complement(9333..9408)
                     /locus_tag="MOX77_002403"
     tRNA            complement(9333..9408)
                     /locus_tag="MOX77_002403"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9373..9375),aa:Val,seq:tac)
     gene            complement(9450..9525)
                     /locus_tag="MOX77_002404"
     tRNA            complement(9450..9525)
                     /locus_tag="MOX77_002404"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9490..9492),aa:Val,seq:tac)
     gene            complement(9571..9646)
                     /locus_tag="MOX77_002405"
     tRNA            complement(9571..9646)
                     /locus_tag="MOX77_002405"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9611..9613),aa:Val,seq:tac)
     gene            9905..11320
                     /gene="gltX"
                     /locus_tag="MOX77_002406"
     CDS             9905..11320
                     /gene="gltX"
                     /locus_tag="MOX77_002406"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HCA3357916.1"
                     /translation="MKIKTRFAPSPTGYLHVGGARTALYSWLFARHHGGEFVLRIEDT
                     DLERSTPEAIEAIMDGMNWLNLEWDEGPYFQTKRFDRYNAVIDEMLEAGTAYKCYCSK
                     ERLEQLREDQMAKGEKPRYDGRCRHSHEHHADDEPCVVRFANPQDGSVIFDDQIRGPI
                     EFSNQELDDLIIRRTDGSPTYNFCVVVDDWDMEITHVIRGEDHINNTPRQINILKALN
                     APVPMYAHVSMINGDDGKKLSKRHGAVSVMQYRDDGYLPEALLNYLVRLGWSSGDQEI
                     FTREEMIKLFSLGAVSKSASAFNTDKLLWLNHHYINTLAPEYVATHLQWHIEQENIDT
                     RNGPQLAELVKLLGERCKTLKEMAQSCRYFYEDFSEFDADAAKKHLRPVARQPLEVVR
                     DKLSAITDWSAENVHHAIQATADELEVGMGKVGMPLRVAVTGAGQSPALDVTVHAIGK
                     TRSIERINKALGFIAERESQQ"
     gene            complement(11374..11766)
                     /locus_tag="MOX77_002407"
     CDS             complement(11374..11766)
                     /locus_tag="MOX77_002407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA-binding transcriptional regulator"
                     /protein_id="HCA3357917.1"
                     /translation="MKRLRSKMTTEELAECLGVARQTVNRWIREQHWKTEKFPGVKGG
                     RARLIHIDASVREFILNIPAFRKLPAFYQAEEAFAEYANATHSHAYRQIIDAVENMSA
                     QEQEKLALFLSREGIRGFLTRLGINEAD"
     gene            complement(11768..12130)
                     /locus_tag="MOX77_002408"
     CDS             complement(11768..12130)
                     /locus_tag="MOX77_002408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA-binding transcriptional regulator"
                     /protein_id="HCA3357918.1"
                     /translation="MFKERMTPEELANLTGYSRQTINKWVRKEGWATSPKPGVQGGKA
                     RLVHVNEQVREYIRSAERSVDHHADTFTPASNASLEALLMTLAKEMTSSEQKQFTSLL
                     VREGITGLLQRLGIRDSK"
     gene            12352..12427
                     /locus_tag="MOX77_002409"
     tRNA            12352..12427
                     /locus_tag="MOX77_002409"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:12385..12387,aa:Ala,seq:ggc)
     gene            12470..12545
                     /locus_tag="MOX77_002410"
     tRNA            12470..12545
                     /locus_tag="MOX77_002410"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:12503..12505,aa:Ala,seq:ggc)
     gene            12736..14925
                     /locus_tag="MOX77_002411"
     CDS             12736..14925
                     /locus_tag="MOX77_002411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor domain-containing phosphodiesterase"
                     /protein_id="HCA3357919.1"
                     /translation="MPDKCNVLKNIKIFLLAFCLTVPAILLSRLISPRATIDSSYIFL
                     AWLPLCVMFSVLFLFGRRGVAPMVGGMMLTNEWNFHLPLPQAMVLLFCQTFPVLLVCA
                     IVRWQLGARWRYGIPNQGIWLRVFWLGLMTPFGIKISMHLAGHYLAFPVTISTFFGTG
                     TAIFSIVDLLSLISAALIFTLFFYYPLRMIVSPHYMRIFWRRDVAPYLAKEKRLFTLL
                     WFATLATLLAVLCTPFETKYIAGYLVPVLFIGFTIGVGKISYPLLNFSWALTALFLLS
                     YNRNFLQGVGSEYSLAFILSVLISFSICLLYMARINQRSEWLNRQWHSQALTDPLTQL
                     PNLRALGQFLLQDAGQSVCYLRMENLEFLSRHYGMQMRVHCEREVFRVLQPLLLEKEK
                     IFHLPGSELLLVLTGPETEARLQYMLNVLNNRKIYWNNTGLDMEYGASWGTFDGRQET
                     LQPLLGQLSWLAEQSCSHRRVLALTQSIEAASGQTTERVLRLQKIRQALERGALVLYA
                     QPIRDAQGKGYDEILTRLRCDDGIMMPNQFIPLIAQFNLSVRFDMQVMEALLQWLSAH
                     PSAEQGARFSVNLMPLTLLQKETASRIMQLFKRYGVPPASVIIEITEEQAFSHSEISM
                     HNINQLRKFGLKIAIDDFGTGYANYERLKRLKADIIKIDGCFVKDILTDSLDAMIVKS
                     ITDLAKAKSLSVVAEFVETPAQRDLLLQLGVHSLQGYLIGRPRPLGK"
     gene            complement(14978..16180)
                     /gene="nupC"
                     /locus_tag="MOX77_002412"
     CDS             complement(14978..16180)
                     /gene="nupC"
                     /locus_tag="MOX77_002412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside permease NupC"
                     /protein_id="HCA3357920.1"
                     /translation="MDRVLHFVLALAVVAVLALLVSSDRKKIRIRYVIQLLVIEVLLA
                     WFFLNSDVGLGFVKGFSEMFEKLLGFANEGTNFVFGSMNDQGLAFFFLKVLCPIVFIS
                     ALIGILQHIRVLPVVIRAIGFLLSKVNGMGKLESFNAVSSLILGQSENFIAYKDILGK
                     MSRNRMYTMAATAMSTVSMSIVGAYMTMLDPKYVVAALVLNMFSTFIVLSLINPYTVD
                     ASEENIQMSNLHEGQSFFEMLGEYILAGFKVAIIIAAMLIGFIALIAALNALFATVTG
                     WFGYSISFQGILGYIFYPVAWVMGVPSSEALQVGSIMATKLVSNEFVAMMDLQKIAST
                     LSPRAEGIISVFLVSFANFSSIGIIAGAIKGLNEEQGNVVSRFGLKLVYGSTLVSVLS
                     ASIAALVL"
     gene            16523..17764
                     /locus_tag="MOX77_002413"
     CDS             16523..17764
                     /locus_tag="MOX77_002413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nramp family divalent metal transporter"
                     /protein_id="HCA3357921.1"
                     /translation="MTDNRVENSSGRAARKLRLALMGPAFIAAIGYIDPGNFATNIQA
                     GASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAE
                     IIAMATDLAEFIGAAIGFKLILGVSLLQGAVLTGIATFLILMLQRRGQKPLEKVIGGL
                     LLFVAAAYIVELFFSQPDMAQLGKGMVIPALPNPEAVFLAAGVLGATIMPHVIYLHSS
                     LTQHLHGGTRQQRYSATKWDVAIAMTIAGFVNLAMMATAAAAFHFSGHTGIADLDQAY
                     LTLEPLLSHAAATVFGLSLVAAGLSSTVVGTLAGQVVMQGFVRFHIPLWVRRTITMLP
                     SFIVILMGLDPTRILVMSQVLLSFGIALALVPLLIFTSNATLMGELVNTRRVKQIGWI
                     IVVLVVALNIWLLVGTVMGLS"
     gene            complement(17825..18151)
                     /locus_tag="MOX77_002414"
     CDS             complement(17825..18151)
                     /locus_tag="MOX77_002414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2502 domain-containing protein"
                     /protein_id="HCA3357922.1"
                     /translation="MFRSLILAAALLAFTPLAANAGEITLLPSIKLQIGDRDDYGNYW
                     DGGRWRDRDYWHNHYEWRKNRWWRHDNGYHRGWDKRKAYERGYREGWRDRDDHRGRGR
                     GHKHHH"
     gene            complement(18265..19263)
                     /gene="mgrA"
                     /locus_tag="MOX77_002415"
     CDS             complement(18265..19263)
                     /gene="mgrA"
                     /locus_tag="MOX77_002415"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-glyceraldehyde 3-phosphate reductase"
                     /protein_id="HCA3357923.1"
                     /translation="MIYQPDENRYHTMEYRRCGRSGVKLPAISLGLWHNFGDTTRVEN
                     SRALLQRAFDLGITHFDLANNYGPPPGSAECNFGRILQEDFLPWRDELVISTKAGYTM
                     WDGPYGDWGSRKYLIASLDQSLKRMGLEYVDIFYHHRPDPETPLKETMKALDHLVRHG
                     KALYVGISNYPADLARQAIDILEDLGTPCLIHQPKYSLFERWVEDGLLTLLQEKGVGS
                     IAFSPLAGGQLTDRYLNGIPEDSRAASGSRFLKPEQITADKLEKVRRLNELAARRGQK
                     LSQMALAWVLRNDNVTSVLIGASKPSQIEDAVGMLANRRFSAAECAEIDAILEGRF"
     gene            19443..>20552
                     /locus_tag="MOX77_002416"
     CDS             19443..>20552
                     /locus_tag="MOX77_002416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-keto acid decarboxylase family protein"
                     /protein_id="HCA3357924.1"
                     /translation="MQNPYTVADYLLDRLAGCGIGHLFGVPGDYNLQFLDHVIDHPTL
                     RWVGCANELNAAYTADGYARMSGAGALLTTFGVGELSAINGIAGSYAEYVPVLHIVGA
                     PCSAAQQRGELMHHTLGDGDFRHFYRMSQAISAASAILDEQNACFEIDRVLGEMLAAR
                     RPGYIMLPADVAKKTAIPPTEALALPVHEAQSGVETAFRYHARQCLMNSRRIALLADF
                     LAGRFGLRPLLQRWMAETPIAHATLLMGKGLFDEQHPNFVGTYSAGASSKEVRQAIED
                     ADRVICVGTRFVDTLTAGFTQQLPAERTLEIQPYASRIGETWFNLPMAQAVSTLRELC
                     LECAFAPPPTRSAGQPVRIDKGELTQESFWQTLQQC"
BASE COUNT         4737 a         5060 c         5616 g         5139 t
ORIGIN      
        1 aacgtcgcgg cccatcatgg cagcgagctt aatggtgaag tgttactgaa cagtattcag
       61 cagtcaggct ttaaatttgg cgatatgaat attttccatc gtcatttgag cccggacggc
      121 agcggcccgg ccttgttcag tctcgcgaat atggtcaatc cgggaacgtt cgatcctgaa
      181 atgacggact tcactacgcc tggcgtcact atctttatgc aggtaccgtc ttacggcgat
      241 gcgctgcaga atttcaagct gatgctgcaa tccgcgcagc atatcgctga tgaggtcggt
      301 ggcgtcgtgc tggatgacca gcgtcggatg atgacgccgc agaaactgcg cgaatatcag
      361 gaccgcatcc gcgaggtgat ggacgctaac gcctgaggtt aacgcaggtg tgacattttt
      421 aacgtaaccc ccgcctgtcg ggggtttttt atcattgatg gtgtgatatg gaaccaatcg
      481 aacaacaact gacagaactg cgaaccacgc ttcgccatca tgaatatctg tatcatgtga
      541 tggatgcgcc cgagattctc gacgccgaat atgaccgcct gatgcgggaa ctgcgagagc
      601 tggaggcgca acgtccggac cttatcacgc cggattcgcc cacgcagcgc gttggcgcgg
      661 cgccgctgac ggcattcaac cagattcgcc atgaagtacc gatgctgtcg ctcgataacg
      721 tatttgatga agaaagcttc ctggcgttta acaagcgagt gcaggatcgt ctaaaaagca
      781 cggaaaatgt catctggtgc tgcgagctaa aactggatgg cctggcggtc agcattctgt
      841 atgaaaacgg cgtgctggtg agcgctgcga cgcgtggcga cggcaccacc ggtgaagata
      901 tcacttcaaa cgtgcgcacg attcgcgcca ttccgttaaa gctgcacggc gataacattc
      961 cggcgcgtct tgaagttcgc ggagaggtat ttttaccgca ggccgggttc gaaaagatca
     1021 atgaagacgc gcgccgtact ggcggcaaag tgtttgctaa tccgcgtaac gcggcggcgg
     1081 gctcgttgcg tcagctcgat ccgcgtatta cggcgaagcg accgctaaca tttttctgct
     1141 acggcgtcgg tattctggaa ggcggagagt tgccggatac gcatctggga cggttgctgc
     1201 aatttaaagc gtgggggtta ccggtcagcg atcgcgtgac gctgtgcgat tctccccagg
     1261 cagtactgga tttttatcac aacgtcgaaa aagatcgccc cacgctcggt tttgatatcg
     1321 acggcgtggt gattaaggtc aactcgctgg ctttgcagga acagctgggc tttgtggccc
     1381 gcgcgccgcg ctgggcggtg gcgtttaaat ttcctgctca ggagcagatg acttttgtgc
     1441 gcgacgttga gtttcaggtc gggcgcaccg gggcgattac gccggtggcg cgtctagaac
     1501 cggttcaggt ggctggtgtg ctggtcagca atgccacgtt gcataatgcc gatgaaattg
     1561 agcggcttgg cttgcgcatt ggcgataagg tggttatccg tcgggcaggc gatgtgatcc
     1621 ctcaggtggt caacgtggtt ctgtccgaac gccctgaaga gacgcgtccg attgtgtttc
     1681 caacgcactg tccggtgtgc ggatcggacg tagagcgcgt cgaaggcgaa gccgttaccc
     1741 gttgtaccgg cgggctgatt tgcggcgcgc agcgtaaaga gtcgctgaaa cattttgtgt
     1801 cgcgccgggc gatggatgta gacgggatgg gcgataagat catcgaccaa ctggtggaaa
     1861 gggagtatgt ccatacgcca gcggatctgt tccgtctgac ggcgggtaaa ctgaccggcc
     1921 tggaccgaat ggggccaaag tccgcgcaaa atgttgttaa cgcgctggaa aaagccaaag
     1981 cgacgacttt tgcgcgtttt ctctatgcgc tgggcatccg tgaagtgggt gaagcgacgg
     2041 cggcggggct ggcggcgtac ttcggcacgc tggaggcgct gcaggctgcc accattgacg
     2101 agttgcagaa agtacccgac gtggggattg tggtcgctac gcacgtcttt aacttttttg
     2161 ccgaagagag caatcgtgac gtgattgggc agctactggc ggaaggggtt cactggcccg
     2221 cgccggtagt cattaatgcg caagagatcg atagcccgtt tgccggtaaa accgtggtac
     2281 taaccggtag cctgagccag atgtcccgcg atgacgctaa agcgcgttta gtggctctgg
     2341 gcgcgaaagt ggcaggcagc gtatcgaaga aaaccgatct ggtgattgcc ggtgaagcgg
     2401 cgggctccaa actggccaaa gcgcaggaac tgggtattac cgtgattgat gaagcggaaa
     2461 tgatccgctt actgggtgcc tgagatggaa aaagagcagc tgcttgaaat cgccaacacc
     2521 gtgatgccct ttggcaaata tcagggacgt cgattgatcg accttccgga agagtatttg
     2581 ctgtggtttg cccgtaaaga tcaatttccg gcgggtaaac taggggagtt gatgcaaatc
     2641 acgctgctga ttaaaaccga ggggctgacg caactggtgc agcccctgaa acgcccgctt
     2701 taagctttcg cggcgcggct ttcctgctgc gcctgtaact tctcggtctg gcgtttgtag
     2761 cgccgcgcca gccctgcgca gaccatcagt tggatctggt ggaagatcat cagcggtaat
     2821 accatcatac ccagcactga cgtcggaaac agaatattgg ccatcgggat cccgttggcc
     2881 aggctttttt tcgaaccgca gaagacaata gtgatttcgt cggctttatt gaagccgcat
     2941 ttacgggcga caaagacgtt aatggctatg acgatcgcca gcagtatgag gctgaccacg
     3001 acgataaaca gcagcgatcc ccagccgact ttgtgccaga tgccgttgac caccgcttcg
     3061 ctgaacgccg agtagaccac caacagaata gaggtctgat ccgttttcgc gatccacttt
     3121 ttgttgcgcg cgacccaatt gccgatccac gggcgagaca ggtgtcccag cacaaaaggc
     3181 agcagcagtt gcagcataat tttgcccacc tcttccagac tgccctgcgc gccatgaata
     3241 ttcattacca gaccgaccag cagcggcgac aggaaaatgc ccagcaggct ggacgcagac
     3301 gctgagcaca ccgcggccgc gacgttgccg cccgcgagtg aagtaaatgc aatcgccgac
     3361 tgcacggtgg cgggcaaaat acacagatac agaaagccgc tgtagagcat agggtcgaca
     3421 ttgacaggcg cccaccaggc aaacagcacg ccgaggacag gaaagagcac aaaagtgctg
     3481 cacatgaccc acagatgcaa ccgccagtgg ctgccgccag cgatgatcgc ttcacgcgaa
     3541 agcttcgcgc catgcataaa aaacagcaga gcgatagccg ctgtcgtaat gccttcaacg
     3601 acaggcacaa agccaccttc cgccgggaaa aaagaggcca gtagtaccac ggtgataagt
     3661 gtcagcgtga aagggtcaag gatacgaaaa agtttcataa aaactcctga aagtcggtgc
     3721 agctattttg cgtttttcgc tttgagaaat aaaattgatt tattgcatct atatatgaat
     3781 ctagtcgatg aactattcac tgcgtcaact gcggattttt attaccgtcg cccaggccaa
     3841 aagttttagt cgggcagggg acaggattgg actgagccag tctgcggtca gtcatagcgt
     3901 aaaagagctg gagcggcaaa ccggcgtcag actgttggat cgcaccacgc gtgaggtggt
     3961 gctgaccgag gcggggcaac agctggcgac gcgtctggag cgggtgcttg atgaactgaa
     4021 cagcatactg cgcgatgcag gcagagtagg gacacaatta accggcaccg tgcgcgttgc
     4081 cgcgagccaa accatttctg cgcatcttat tccgcaatgc attgcccaaa gtaattcact
     4141 ttatcccgct attgattttg tattgcacga tcgtccgcag cagtgggtgc tggagagcat
     4201 ccgccagggt gaagtggatt ttggcatcgt tatcgatccc ggcgcagcgg tggatttaca
     4261 gtgtgaagcc atcttatcag agcctttttt actgttgtgt cgccaggatc atccgctggc
     4321 gcatcaggaa tgggtgagct ggcaggatct taaacaggcc tcgctggtct tacaggatta
     4381 tgcttccggc agtcgaccgc tgattgatgc ggcgctggcc cattttgcta ttgaggcgga
     4441 tatcgtgcag gagattggtc acccggccac gctgtttcca atggtggaag cgggaatcgg
     4501 catcagcgtg ctgcccgcgc tggcgttacc gctcccgcag ggcagccact tacaggttaa
     4561 acggctgacg cccgtagttg aaaggcagct catgctggcg cggcgaaaaa accgatcgct
     4621 ctccacggcg gcgcaggcgt tgtgggacgt ggtgcgtact caggccagcg aattaaccgc
     4681 cgcgagggcg aaagatccgc tgtatcagct ataaatatct atctgtccgt gtgtgaggtg
     4741 cggtcttgcc ctgccatttt tgacagggca gtgtgttaaa acaggtattt gatggaataa
     4801 ataatgccat cctgcaggaa ggattctcct aacttattat cagcgtaacg atattgtact
     4861 cctgcggtca ggtgaggagt cgcattccac cacagcgcta ctgcgccatt aatgccatct
     4921 ttcccgccat tgcccgcagc gtaggacgca tcgcggtcaa actcatactc attccagttc
     4981 gttacgctga atttctcact acccaacgag aagctatagc cggccaccca acctaataca
     5041 taaccattat cgcctgtgta gtaggtctga tcggtataac gtttggcaaa gaagggttta
     5101 aaccagtaac cgttacctgt gaagttatag cctaaaccat agagaaacat gtcatcatgg
     5161 aaattagcgc gatgaggtga accgtacgtc ccgtaggcat ggagatagag gtttaatcct
     5221 gtatcgccca gataaatacg gttggtattt ttaaaggtgt aacgctgttc gctgcttggt
     5281 ttagcgtggc ggccattgta aaaattttcc cagtcgaaga acccgtacat ttctccccag
     5341 ctaaaattcg ctccgccttc cagttccagg tacccaaaat catctttatg ggatttttta
     5401 ctggtttttt ccgtggtgtc tgatgtccag tcgaggtaat ggaggccgat atcggcgaac
     5461 ccgcctttaa attccgcatg ggtgagtgcg ggaataatga gtaaagaaga aagcgtcaga
     5521 gtaagaattt ttttcatagc atatttccct atgccgataa ttattaatgg gttaattaaa
     5581 aagaggcaat ttataaatat gaaagcggca tattgttaat atgaagtgca agcaaaaacc
     5641 aatactgttt tccctctgta ttaatacaga agcgatctaa atctatcgat attaaatggc
     5701 tattgatgac acgtgaaaag tgtattggtc agcaaggggc gatggtcgtt ataaaaagga
     5761 gtcaaattaa atccgataga acaaggaaac ttatgcctca cgctcttttt tctcataatc
     5821 ctgagtattg tattgatatt attcatgcac ataaaccggc atttaccccg cgagtcgcgt
     5881 ttattttagg ctccgggttg ggtgctctgg cggatcaaat cgaagatgcg gtagccattt
     5941 cttacgagaa attgccggga tttcccgtca gcaccgtaca cggccatgct ggtgaactgg
     6001 tgctcggcca tctggcgggt gttccggtgg cctgtatgaa aggccgcgga catttttatg
     6061 aagggcgtgg aatggcggtg atgaccgatg ccattcgcac gttgaaatta ctgggctgtg
     6121 aagtgttgtt ctgcaccaat gcggcaggat ctctgcgtcc ggaagtgggg ccgggtagcc
     6181 tggttgcgct tagcgatcac attaatacga tgcccggtac gccgatggtg gggccaaacg
     6241 atgatcgtta tggcgatcgc ttcttctcgc tggctaatgc ttatgacgca gattatcgcg
     6301 ccatgcttca gtccgttgcg gcagagaagg gattccccct cactgaaggc gtatttgttt
     6361 cttatccggg tccgaacttc gaaacggcgg cagaaatccg catgatgcag attattggcg
     6421 gcgatgtggt cggaatgtcc gttgtccctg aggtgattag cgcacgtcat tgtggcctca
     6481 aagttgttgc cgtctcagcg atcaccaatc tggcggaagg gctgggcgat gtaaaactct
     6541 cccatgcgca aacgctggcg gcggctgaac tttcccggca gaactttatc aatctgattt
     6601 gcggcttttt acgtaagctg gcctaaacac aatgactacg gccccgtatt ggggctttat
     6661 ctcacggcaa ggaataaaaa atgggtatta cgtcccgctt aaaagtcatg tcgttcttgc
     6721 aatattttat ctgggggagc tggctggtta ccctgggctc ttacatgatc aacactctgg
     6781 attttaccgg cgcgaatgtc ggtatggtct acagctcaaa aggactggca gcgattatca
     6841 tgccgggcat tatggggatc attgctgata aatggctgcg cgctgagcga gcctatatgc
     6901 tttgccatct ggtttgcgcg ggggcgttat tgtacgccac caccgttacc gatccccaga
     6961 cgatgttctg ggtgatgttg gttaatgcga tggcgtatat gccaacgatt gcattatcca
     7021 atagcgtttc gtactcctgt ctggcgaaag caggtcagga tccggtaacg tcatttccgc
     7081 ccgtgcgcgt tttcggcaca ataggtttta ttgttgcgat gtggacggtg agcctgatgg
     7141 ggctggaact gagcagtgcg caattataca tcgcttctgg cgcatcgtta ttgctggccc
     7201 tgtatgcgct gacgttaccg aaaattccgg tagccgagaa gaaggcgaac accacgcttg
     7261 tcagtaagct cggactggat gcttttgttc tgtttaaaaa tccacgcatg gcaatcttct
     7321 ttttgtttgc gatgatgttg ggggcggtgc tgcaaattac caatgtcttc ggtaatccgt
     7381 tcctgcatga ttttgcccgt aatcctgagt ttgccgatag ttttgtggtg aagtatccct
     7441 ctatcttgct ttcagtttcg cagatggcgg aagtgggctt tatcctcacc attccgttct
     7501 tccttaaacg ctttggtatt aaaacggtaa tgctgatgag catgctggcg tggacgctgc
     7561 gtttcggctt ctttgccttt ggcgatccat ccccgtttgg ctttgtgcta ttgctgctgt
     7621 cgatgattgt ttatggctgc gcatttgatt tcttcaacat ctcagggtca gtatttgtag
     7681 agcaggaggt ggactcaagt attcgcgcca gcgcgcaggg gctgtttatg accatggtta
     7741 acggcgtggg ggcgtggatt gggtctcttt taagcggtat ggccgtggat tatttttcta
     7801 ttgatggcgt aaaagattgg caaaccatct ggctggtttt tgccgcctac gctctggcat
     7861 tggccgttat ttttgcattg ttctttaaat atcagcacca tccagaaaaa ctgtcgacca
     7921 aatcattagc acattaattt tatttgactg gcgagaggat gttcgccagt ccatttttat
     7981 gaacaaggac acagtatgaa agaaattatt ctctcctccg gtattggatt tggtattggc
     8041 gcatttttta ctttatgccg tatacctatt cctgcaccaa atgttttacc cggggtttta
     8101 tctattgtat ttatgtatat tgggtatctt gtcgttaaat ctatttttta ctaggtaata
     8161 tggtaaattc cagacgttat cccttattcc tggagtgcga tagtgatgga acgagcccat
     8221 cgtattgatc taaagctatt acgttatttc ctcgctgttg cagaagaatt gcattttggc
     8281 cgggctgctg cccggttaaa tatgtcacaa cctcccttga gtatccatat caaagaactt
     8341 gaacagcaac tgggtacatt gctgtttatt cgtcattccc gcagcgttgc attaacccat
     8401 gccgggaaag ttttaatgga ggagtcacgt cgcttgttag ccaatgcaaa tcaggcgctg
     8461 gcgcgagtgg agcagattgg tcgcggtgaa gcggggcgca ttgaactggg tgtggttggt
     8521 acggcgctgt ggggaagaat gcgtcctgcg atgcgtcact ttttgaaagc aaatcccaat
     8581 gttgaagtac tttttcgcga aaagtctcca ggtatgcaaa tggcgttgtt agagcgtcgg
     8641 gaacttgatg cagggatctg gcgtatggct atcgaaccag cagtcggttt taccagcata
     8701 cgtttgcatg aatctgcatt catggttgca gttccggaag atcacgatct ggcatccaga
     8761 gattctgtgc cgctgtcggc gttgcgcaat gaatattttg ttacgttgcc ttccgtacat
     8821 tctgattggg gatttttaca acgtgtatgc caacaggcgg gtttctcgcc aatgattatt
     8881 cgggaagtgg ttgagccgca aacggtgttg gcgatgatca gtatggggat cgggattacg
     8941 ttgatggctg atggctatgc gcaaatgagc tggccgggtg tggtgttccg tccgttagag
     9001 gaacgtattc cggcggattt gtatattgtg tatgaccagc agcaggcaac gccagcactg
     9061 gagaaactgg tggcggcgtt gacggtatga tgtctgtgcc ggatggcgac taacgtctta
     9121 tccggcctac gcggcggtgt cgtctgtagg cctgataagc gcagcgcatc aggcaagacc
     9181 cgaacctgcg gcaggttcga atcttataaa tcgcagatag caaaaaagcg cctttagggc
     9241 gcttttttac attggtgggt cgtgcaggat tcgaacctgc gaccaattga ttaaaagtca
     9301 actgctctac caactgagct aacgacccga agtggtgggt gatgacggga tcgaaccgcc
     9361 gaccccctcc ttgtaaggga ggtgctctcc cagctgagct aatcacccac ttcggtactt
     9421 cacaataaga aatttagctg gcgagaaagt ggtgggtgat gacgggatcg aaccgccgac
     9481 cccctccttg taagggaggt gctctcccag ctgagctaat cacccacttc tcaatttctt
     9541 atctacacgg cggagactac ataaagtagt tggtgggtga tgacgggatc gaaccgccga
     9601 ccccctcctt gtaagggagg tgctctccca gctgagctaa tcacccccgc tgtgtggagt
     9661 cgcattatag ggagagttga aaatgagtca acgcattttc taaagttttt gtttgttcgt
     9721 cgtaaaatta aacaaaacga tcgtgaatta ccccgcactg catgatttct atacggaaat
     9781 agcaaagcgc agcgttctga ccggatcaac attgaggaat caagccacag tgatagaata
     9841 caaggctatt catctttcca ggatttgccg gttgtcggca tctttataaa cgtaaggcca
     9901 tttcatgaaa atcaaaactc gcttcgcgcc tagcccgaca ggttatctgc acgtcggcgg
     9961 cgcgcgtact gctctttatt cctggctttt cgcacgtcac cacggcggtg aattcgtgct
    10021 gcgtattgaa gacaccgatc ttgagcgttc cacgccggaa gccattgaag ccatcatgga
    10081 tggtatgaac tggctgaacc tggaatggga cgaaggccca tatttccaga ccaaacgttt
    10141 tgatcgctat aacgcggtga ttgacgagat gctggaggcg ggaacagcct ataaatgcta
    10201 ctgctctaaa gagcgtctgg agcaactgcg tgaagatcag atggcgaaag gcgagaagcc
    10261 gcgttatgac gggcgttgcc gtcacagcca cgaacatcat gccgacgatg agccatgcgt
    10321 ggtgcgcttt gccaacccgc aggacggttc cgttattttt gatgatcaga tccgtggccc
    10381 gatcgaattc agcaatcagg aactggacga tctgatcatt cgtcgtaccg acggttcccc
    10441 aacctacaac ttctgtgtgg tggtggacga ctgggatatg gaaattaccc atgtgattcg
    10501 tggcgaagac catatcaaca atactccgcg ccagattaac attctgaaag cgttaaacgc
    10561 gccggtgccg atgtacgcgc atgtgtcgat gattaacggc gacgacggta aaaagctgtc
    10621 taaacgtcac ggtgcggtga gcgtgatgca gtatcgcgat gacggttatc tgccggaagc
    10681 gttgctgaac tatctggtgc gtctgggctg gtccagcggc gatcaggaaa tcttcacccg
    10741 cgaagagatg atcaagctgt tctccctcgg tgcggtgagc aagtctgcga gcgcgttcaa
    10801 caccgataaa ctgctgtggc tgaaccacca ctatatcaat acgctggcgc cggaatatgt
    10861 ggcgacgcat ttgcagtggc atatcgagca ggaaaatatc gacacccgta acggcccgca
    10921 gcttgctgag ctggtgaagt tgctgggcga acgctgcaag actctgaaag agatggcgca
    10981 gagctgccgc tacttctatg aagacttcag cgagtttgac gccgatgcgg cgaaaaaaca
    11041 cctccgcccg gtggcgcgtc agccgctgga agtggtgcgc gacaagctgt cggcgattac
    11101 ggactggtca gcagaaaacg tccaccacgc gattcaggcc acggcggatg agctggaagt
    11161 ggggatgggt aaagtaggga tgccgctgcg tgtggctgtg accggtgccg ggcagtcgcc
    11221 tgcgctggat gtcaccgtac atgcgattgg taaaacccgc agcattgagc gtatcaacaa
    11281 agcgctgggc tttatcgccg agcgtgaaag tcagcagtaa cgccagctga aacagaataa
    11341 acggcagggc agacgcctgc cgtttattat ttgttagtcc gcctcattga tacctaaacg
    11401 cgtcagaaat ccgcgaatac cttcccgcga taaaaacagc gccagttttt cctgttcctg
    11461 agcagacata ttttcaacgg catcaataat ttgtcgataa gcgtgactgt gcgtcgcgtt
    11521 cgcatattct gcgaaagcct cttccgcctg ataaaacgca ggcagtttgc gaaaagccgg
    11581 aatattgaga ataaactccc gcacgctggc atcaatatgg atgagtcttg cgcgtccgcc
    11641 tttgacgccg ggaaattttt cggttttcca gtgttgttct ctgatccagc gattgacggt
    11701 ttgtctggcc acgccgaggc attcagccag ctcttcagtg gtcattttac tgcgtaatct
    11761 tttcatatta tttgctatcg cgtatcccta agcgttgtaa caaaccggta atcccttcac
    11821 gcacgaggag agaggtaaac tgtttctgct cggatgaggt catctctttg gcgagcgtca
    11881 tgagcagcgc ttcaagcgat gcgttgctgg caggcgtgaa tgtgtctgcg tgatggtcaa
    11941 ctgaacgttc agcgctgcgg atatattcac gaacctgttc gtttacatga accagacggg
    12001 ctttaccgcc ctggacgcca ggtttgggcg atgttgccca gccttctttc cgtacccatt
    12061 tattgatggt ttgtcggctg taaccggtga gattagcgag ttcttctggc gtcatccgtt
    12121 ccttgaacat aacgattccc tgaatagtcg tggggttaat tagtggttca ttttatagca
    12181 ccattttagt cgaaaccgtg acgtgtttaa ctactgaatg cgagttgtgc cgcaatgtcc
    12241 tttatttgaa tgctttttca gcgattgaat tcggcaagtt cattttgccg ttgacacatg
    12301 ccgagggaat tcatatgatg ccgcccgtca actcgacaag ctttacgtag tggggctata
    12361 gctcagctgg gagagcgctt gcatggcatg caagaggtca gcggttcgat cccgcttagc
    12421 tccaccaaat ttactcccga taaatttggc gtatacgtaa aagcactatg gggctatagc
    12481 tcagctggga gagcgcttgc atggcatgca agaggtcagc ggttcgatcc cgcttagctc
    12541 caccaacgtt caaaccctcg ctgaaaagcg ggggtttttg ctttttgtca caaaattcat
    12601 ggcgtctgat ctgctcttca ggtgcgttcg tttgccgctg cttttgcggt caatatgagc
    12661 ttttgttaga ttgcttcata atgcgaatat acttattatt catgcgcctt atataatgat
    12721 gtgagcatta aagcaatgcc ggataagtgt aacgtattaa aaaatataaa aatattctta
    12781 ctggccttct gcctgaccgt tccggctatt ctgctatctc gtctcatttc tccccgcgcc
    12841 acaattgatt ccagctatat ctttctggcc tggctaccgc tctgcgtcat gttttccgtg
    12901 ctgtttttat ttggccgccg tggcgtcgcg ccgatggtag gcggaatgat gttgactaat
    12961 gaatggaatt ttcatttacc tctgccacag gcgatggtgc tgctattttg ccagacgttt
    13021 cccgtgttgc tggtttgcgc tatcgtacgc tggcagctgg gcgcgcgctg gcgctacgga
    13081 atacccaacc aaggcatctg gctacgcgtt ttctggttag ggttaatgac gccgtttggt
    13141 ataaaaatca gtatgcatct ggcggggcac tacctggctt tcccggtgac catctctacc
    13201 ttctttggca ccggcaccgc tattttctcg attgtcgatt tattgagtct gatttctgcc
    13261 gcgcttattt ttaccctctt tttctattat ccgctgcgaa tgatagtcag cccgcactat
    13321 atgcgtattt tctggcggag ggatgtcgct ccttatctcg ccaaagaaaa acgcctgttt
    13381 acgcttctct ggtttgccac tctggcgacg ctattagcgg tgctgtgtac gcctttcgag
    13441 acaaagtata ttgctggcta tctggtgcca gttctgttca ttggatttac catcggcgtg
    13501 gggaaaatca gctatccgct gttgaatttt agttgggctc tcactgcgct attcctgctt
    13561 agctataacc gcaattttct gcagggcgtg ggttcagaat attcgctggc atttatcctt
    13621 tcagttctca tttcttttag tatttgtttg ttgtacatgg cgcggattaa tcagcgtagc
    13681 gaatggttga atcgacagtg gcactcgcag gcattgaccg atccgttgac gcaactgcct
    13741 aacttgcgcg cgctggggca gtttctttta caggatgccg ggcaaagcgt gtgttatcta
    13801 cgcatggaaa acctggaatt tctgagccgt cattacggta tgcagatgcg cgtgcattgc
    13861 gaacgcgagg tgtttcgcgt gttgcagccg ctgctgctgg aaaaggagaa aattttccat
    13921 ctgccgggca gtgaattatt gctggtattg acgggaccgg agacggaagc ccgcctgcaa
    13981 tatatgctca atgtgcttaa taaccgcaaa atttactgga acaataccgg tctggacatg
    14041 gaatacggcg catcgtgggg aacattcgat ggtcgccagg aaaccttgca accgctgttg
    14101 gggcaattaa gctggctggc ggagcaatcc tgctcgcacc gtcgggtgct tgcactgacc
    14161 cagagtattg aagccgcttc cgggcagacg acggaacggg tgctgcggtt gcagaaaatc
    14221 cgtcaggcgc tggagcgcgg cgcgctggtt ttgtatgcgc aacccattcg cgacgcgcag
    14281 ggaaaagggt atgacgagat tctgacgcgg cttcggtgcg acgacggtat catgatgccg
    14341 aatcagttca ttccgcttat cgcccagttt aacctgagcg tacggtttga tatgcaggtg
    14401 atggaagcgc tcctgcaatg gttgtccgcg catccttcgg cggagcaggg ggcgcgtttt
    14461 tcggttaatt tgatgccgct gacgctgctg caaaaagaga cggcgtcgcg cattatgcag
    14521 ctttttaaac gctatggcgt cccgcctgct tcggtcatca tcgaaattac tgaagaacag
    14581 gccttctctc attccgaaat cagtatgcac aatatcaacc agctgcgtaa gtttggccta
    14641 aaaatcgcca ttgatgattt cggcaccggt tatgcaaact atgaacggct aaaacgcctc
    14701 aaggcggaca tcattaaaat cgacggttgt ttcgtaaaag atattctgac ggactccctg
    14761 gatgcgatga tcgtgaaatc catcactgat ttagcgaaag cgaaatcgtt gagcgtcgtg
    14821 gctgagtttg ttgaaacgcc tgcgcagcgc gatctgctat tgcagcttgg cgtacatagt
    14881 ttgcagggat atctgattgg ccgcccgcgc ccgttaggca aataagcggc ataaaaaaac
    14941 cggggatagc tccccggttt ctacattaaa cgcagactta cagtaccagc gccgcgatag
    15001 aggcggacag tacgctcacc agcgtagaac cgtaaaccag tttcagacca aaacgggaaa
    15061 ccacgttgcc ttgctcttcg ttcaggcctt taatcgcgcc cgcaataata ccgatggaag
    15121 agaagttcgc gaaggacacc aggaagacgg agataatgcc ttcagcgcgt ggagagaggg
    15181 tagaggcgat tttctgcaga tccatcatcg ccacgaattc gttggaaacc agtttggtcg
    15241 ccatgatact tcctacctgc agcgcttcac tggacggtac gcccattacc catgcgaccg
    15301 ggtagaagat gtaacccaga atgccctgga aggagatgct gtagccgaac caaccggtaa
    15361 ccgttgcgaa cagcgcgttc agcgccgcga tcagcgcgat gaagccgatc agcatcgccg
    15421 cgatgataat cgccacttta aaacctgcca gaatgtactc gcccaacatt tcgaagaaac
    15481 tttggccttc atgcaggttc gacatctgaa tattttcttc gctggcatca acggtatagg
    15541 ggttgatcag cgacagaacg ataaaggtgc tgaacatgtt cagaaccagc gctgcgacca
    15601 catatttagg gtccagcatg gtcatatacg cgcccacgat agacatggaa acggtagaca
    15661 tcgccgttgc agccatggtg tacatgcggt tacgggacat tttaccgaga atatctttat
    15721 aagcgataaa gttctcagac tggccgagga tcagcgagct gacggcgtta aaagattcca
    15781 gtttgcccat accgtttact ttggatagca ggaaaccaat agcgcggatg accactggca
    15841 gaacacggat atgctggaga ataccgatca acgcggaaat aaagacgatc gggcacaata
    15901 ctttcaggaa gaagaacgcc aaaccttgat cgttcatact gccaaagacg aagtttgtcc
    15961 cttcgttggc aaatccgagc agtttttcaa acatctcgga gaaacctttt acgaagccaa
    16021 ggccaacatc cgagttcagg aagaaccagg ccagtaacac ttcgataaca agtaactgaa
    16081 tgacgtaacg aatgcgaatt tttttacggt cgctgctaac cagcagtgcg agtaccgcaa
    16141 caacggcaag cgccaggaca aaatgaagga cgcggtccat atttgctcca aatatgaggc
    16201 aggtttaatt ttcgtgcaca ttctatgcaa cagctgtaaa gaaaacgaga tccaacacac
    16261 actataataa ggacctgtga cgagattcaa aattagtgat ctgtaataca cttttactgt
    16321 actgaatatg aaaatgaaaa gttatatcag tgtgctaatc ttgtaatgtt aagccaaact
    16381 gttctgatac aggtcgccat cgtatcggtc tatcgtttca cactatcaaa gtaatcaccc
    16441 gtacccattg aaatgcactt gataatcatt atcaatgaac atagcatgaa acatagcaaa
    16501 ggctatgttt ttgaggcaaa agatgactga caatcgcgta gagaatagca gcggacgggc
    16561 ggcgcgcaag ctaaggctcg cattaatggg acctgcgttc attgccgcga ttggttatat
    16621 cgatcccggt aacttcgcga ccaatattca ggccggcgcc agctttggct accagctact
    16681 ctgggtggtg gtctgggcga acctgatggc gatgctgatt caaatcctct cggcaaaact
    16741 cgggatcgcc accggcaaga acctggcgga gcaaattcgc gaccattatc cgcgtccggt
    16801 agtctggttt tactgggtac aggcggaaat catcgcgatg gccaccgatt tagctgaatt
    16861 tatcggcgcg gcaataggtt ttaagctgat cctgggcgtc tctttactac agggcgcggt
    16921 attgaccggt atcgcgacgt ttctgatttt aatgttacag cgccgcggtc aaaaaccgct
    16981 tgaaaaagtc atcggcggtt tactgctttt tgtcgccgcc gcttacattg tggagctgtt
    17041 tttctctcag cctgatatgg cgcagctcgg caaaggaatg gttatcccgg cgctaccgaa
    17101 cccggaagcc gtattcttag ccgccggcgt gcttggcgcg acgattatgc cgcacgtgat
    17161 ttatctgcac tcgtcattaa cgcagcatct gcacggcgga acgcggcaac aacggtactc
    17221 agcaacgaaa tgggatgtcg ctattgccat gacgattgcc ggttttgtca atctggcaat
    17281 gatggcgacc gccgcggcgg cgtttcattt tagcggccat actggcatcg ccgacctcga
    17341 tcaggcatac ctgacgctgg aaccgttact aagccatgcg gcggcaacag tgtttggtct
    17401 tagtctggtt gcggcagggc tttcctccac cgtggtaggg actctggcgg ggcaggtggt
    17461 gatgcaaggg tttgtccgtt ttcacattcc gctgtgggta cggcgcacca ttaccatgct
    17521 gccctcattt attgtgattt tgatggggct ggaccctacc cgaattctgg tgatgagcca
    17581 ggtgctgctg agttttggta ttgcgctggc gctggtgccg ctcctgattt tcaccagtaa
    17641 cgctacgcta atgggcgagc tggtgaacac gcggcgggta aaacagattg gctggataat
    17701 tgtcgtgctg gtcgtcgccc tgaatatctg gttgctggtt ggaacggtga tggggttgtc
    17761 ataaagacag aaagatagca ggcccgatgc gtgggcgtca tcgggctgtt attcagcagg
    17821 aggcttagtg atgatgtttg tgaccccggc ctcgcccgcg atgatcgtcg cgatcgcgcc
    17881 agccttcccg ataaccgcgt tcatacgctt tacgcttatc ccagccgcga tgatagccgt
    17941 tgtcatggcg ccaccagcga tttttacgcc attcataatg gttgtgccag taatcccggt
    18001 cgcgccagcg accaccgtcc cagtagttac cgtaatcatc gcgatcgcca atctgtaatt
    18061 ttattgaggg caacagggtg atttcgcccg cattcgcggc aagcggtgta aaagccagca
    18121 aggctgccgc cagaatcagt gacctgaaca tactttctct ccttcacgat cgagccgtcg
    18181 ccggcctgtt aatgcaatat tacaaagcag taaagatttg tttcatcgcc ttaactctta
    18241 aatcatgaag gagagcattt tttgctaaaa ccggccctcc agaatagcgt caatttctgc
    18301 acattccgcc gccgaaaaac ggcgattggc cagcattcct acggcgtctt cgatttgcga
    18361 cggtttgctg gcgccaatca gtaccgaggt aacgttatcg ttacgcagca cccaggcgag
    18421 cgccatctga gacaattttt ggccccgtcg tgcagccagt tcattcaacc ggcgaacttt
    18481 ttccagtttg tcggcggtaa tctgttctgg tttaaggaaa cggcttccgc tcgccgcgcg
    18541 ggaatcttcc ggaatgccat tcagataacg gtcagtgagc tgcccgcccg ccagcggcga
    18601 gaaggcaata ctgccgacgc ctttttcctg caacagcgtc agcagcccgt cctctaccca
    18661 acgctcaaaa agcgaatatt taggctgatg aatcaggcaa ggcgtgccga gatcctccag
    18721 aatatcgata gcttgtctgg ccagatcggc aggatagtta gagatcccca cgtacaacgc
    18781 tttgccgtgg cgcacaaggt gatctaacgc tttcatcgtc tctttaagcg gcgtttcggg
    18841 atcgggacga tggtgataaa agatatcgac atactccagc cccatacgtt tcaggctttg
    18901 atcgaggctg gcgataaggt atttccgtga accccagtcg ccataagggc catcccacat
    18961 ggtgtagccc gctttggtgg agatgactaa ctcatcgcgc cacggtaaaa aatcttcctg
    19021 cagaatgcgg ccaaaattgc attctgcgga gcccggcggc ggcccataat tattggcgag
    19081 atcaaagtgg gtaatgccca gatcgaacgc gcgttgcagc agcgcccggc tattttctac
    19141 ccgtgtcgta tcgccgaagt tgtgccataa ccccagcgaa atagcgggaa gtttgacgcc
    19201 gctgcgcccg cagcgacgat actccattgt gtgataacga ttctcatcgg gctgataaat
    19261 catgaccttt ccccctgtgg cgtgaataaa tagtgtatac ggttacactc gccaggcggt
    19321 atccggcttt tactgtttgc cgctgtaaac attgttttcc aggctttcat ccccgccgtg
    19381 ctggacagcc atcggcattc cttaatactc aacataatgt caacgtcaga aggaaagctg
    19441 tcatgcaaaa cccctatacc gtggccgact atttgctgga cagactggca ggatgcggca
    19501 ttggccatct ttttggcgta ccgggcgatt ataacttgca gtttcttgac catgtgattg
    19561 accacccgac cttgcgttgg gtgggatgcg ccaatgagct gaacgccgct tataccgcgg
    19621 acggttatgc gcgcatgtcg ggcgctggag cgctactcac cacctttggc gtgggagaac
    19681 ttagcgctat taacggtatc gcgggcagtt acgcggaata tgtcccggtc ttgcatatcg
    19741 tcggcgcgcc ctgtagcgct gcgcagcagc gtggcgaatt gatgcaccat accctcggtg
    19801 acggcgattt tcgtcatttt tatcgcatga gtcaggcgat atccgctgcc agcgcaatat
    19861 tggatgaaca gaacgcctgt ttcgagattg accgcgtatt gggtgaaatg cttgccgcac
    19921 gcaggccagg atacatcatg ctgcccgccg acgtggcgaa aaaaacggct atcccgccta
    19981 cggaggcgct ggcgttgccc gtgcatgaag cgcaaagcgg cgtggagacg gcttttcgtt
    20041 accacgcccg tcagtgcctg atgaacagtc ggcgcattgc gctattggcc gactttcttg
    20101 ccgggcgttt tggtttacga ccactgttgc agcgctggat ggcggaaacg cccatcgctc
    20161 atgcgacact actgatgggg aaggggcttt ttgatgaaca gcacccgaac ttcgttggca
    20221 cctatagtgc aggcgccagc agcaaagaag tacgtcaggc catagaggac gccgataggg
    20281 ttatctgcgt cggcacccgt tttgtcgata cccttacggc cggatttacc caacaattgc
    20341 cggcggaacg cacgctggag attcagcctt acgcgtcgcg catcggcgaa acctggttca
    20401 acctcccgat ggcgcaggca gtgtctacgc tgcgcgaact gtgccttgaa tgcgcttttg
    20461 cgccgccgcc gacgcgttcc gccggacagc cagtgcggat tgataaggga gaactgaccc
    20521 aggaaagctt ctggcaaacc ttacagcagt gt
//
LOCUS       DAGWFR010000065        20430 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.066, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000065 DAGWFR010000000
VERSION     DAGWFR010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 20430)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20430)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20430
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.066"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..461)
                     /locus_tag="MOX77_002417"
     CDS             complement(<1..461)
                     /locus_tag="MOX77_002417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HCA3357925.1"
                     /translation="MSGQPKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTSDR
                     MEADLVPKHGIDIDFIRISGLRGKGVKALLAAPLRIFNAWRQARAIMKRFKPDVVLGM
                     GGYVSGPGGLAAWSLGIPVVLHEQNGIAGLTNQWLAKIATTVMQAFPGAFP"
     gene            complement(458..1702)
                     /gene="ftsW"
                     /locus_tag="MOX77_002418"
     CDS             complement(458..1702)
                     /gene="ftsW"
                     /locus_tag="MOX77_002418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsW"
                     /protein_id="HCA3357926.1"
                     /translation="MRLSLPRLRMPRVPGFGLLAWLFAALKGWVMASRDKDADSLIMY
                     DRTLLWLTFGLAAIGFVMVTSASMPVGQRLANDPFLFAKRDALYIFLAFCLAMVTLRL
                     PMTFWQKYSTTMLIASIIMLLIVLVVGSSVNGASRWIALGPLRIQPAEFTKLSLFCYL
                     ANYLVRKVDEVRNNLRGFLKPMGVILVLAVLLLAQPDLGTVVVLFVTTLAMLFLAGAK
                     LWQFIAIIGMGISAVILLILAEPYRIRRVTSFWNPWEDPFGSGYQLTQSLMAFGRGEI
                     WGQGLGNSVQKLEYLPEAHTDFIFAIIGEELGYIGVVLALLMVFFVAFRAMSIGRKAL
                     EIDHRFSGFLACSIGIWFSFQALVNVGAAAGMLPTKGLTLPLISYGGSSLLIMSTAIM
                     FLLRIDYETRLEKAQAFTRGSR"
     gene            complement(1702..3018)
                     /gene="murD"
                     /locus_tag="MOX77_002419"
     CDS             complement(1702..3018)
                     /gene="murD"
                     /locus_tag="MOX77_002419"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HCA3357927.1"
                     /translation="MADYQDKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRVTPPGL
                     DKLPQEVERHVGGLNDEWLLAADLIVASPGIALAHPSLSAAASAGVEIVGDIELFCRE
                     AQAPIVAITGSNGKSTVTTLVGEMAKAAGVNVGVGGNIGLPALMLLDADRELYVLELS
                     SFQLETTSSLQAAAATVLNVTEDHMDRYPFGLQQYRAAKLRVYEKAKVCVVNADDALT
                     MPVRGADERCVSFGVNMGDYHLNRQQGETWLRVKGEKVLNVKEMKLSGQHNYTNALAA
                     LALADAVGLPRASSLKALTTFTGLAHRFQLALEHNGVRWINDSKATNVGSTEAALNGL
                     HVDGTLHLLLGGDGKSADFSPLARYLTGDRIRLYCFGRDGAQLAALRPEIAQQTETME
                     EAMRLLAPHVQPGDMVLLSPACASLDQFKNFEQRGDVFTRLAKELG"
     gene            complement(3021..4103)
                     /gene="mraY"
                     /locus_tag="MOX77_002420"
     CDS             complement(3021..4103)
                     /gene="mraY"
                     /locus_tag="MOX77_002420"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HCA3357928.1"
                     /translation="MLVWLAEHLVKYYSGFNVFSYLTFRAIVSLLTALFISLWMGPRM
                     IARLQKLSFGQVVRNDGPESHFSKRGTPTMGGIMILTAIVISVLLWAYPSNPYVWCVL
                     VVLIGYGIIGFVDDYRKVVRKDTKGLIARWKYFWMSVIALGVAFALYLVGKDTPATQL
                     VVPFFKDVMPQLGLFYILLSYFVIVGTGNAVNLTDGLDGLAIMPTVFVAAGFALVAWA
                     TGNMNFANYLHIPYLRHAGELVIVCTAIVGAGLGFLWFNTYPAQVFMGDVGSLALGGA
                     LGIIAVLLRQEFLLVIMGGVFVVETLSVILQVGSFKLRGQRIFRMAPIHHHYELKGWP
                     EPRVIVRFWIISLMLVLIGLATLKVR"
     gene            complement(4097..5455)
                     /gene="murF"
                     /locus_tag="MOX77_002421"
     CDS             complement(4097..5455)
                     /gene="murF"
                     /locus_tag="MOX77_002421"
                     /EC_number="6.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HCA3357929.1"
                     /translation="MISVTLSKIADVLGAEHRGADLTLDTVITDTRKVTPGCLFVALK
                     GERFDAHDFADKAKANGAGALLVSRPLDIDLPQVIVKDTRQAFGQLAAWVRMQVPARV
                     VALTGSSGKTSVKEMTAAILSQCGNTLYTASNFNNDIGVPITLLRLNHDYDYAVIELG
                     ANHQGEIAWTVSLTRPEAALVNNLAAAHLEGFGSLAGVAKAKGEIYTGLPENGIAIMN
                     ADNNDWLNWQSIIGDRQVWRFSPNAANSDFTAANIHVTSHGTEFTLQTPMGSIDVLLP
                     LPGRHNIANALAAAALSMAVGATLAAVKAGLAALKAVPGRLFPIQLSENQLVLDDAYN
                     ANVGSMTAAVQVLSEMPGYRVLVVGDMAELGAESEACHLQVGEAAKAAGIDRVLSTGK
                     LSQVISHASGVGEHFADKAALIARLHALLQEQPMMTILVKGSRSAAMEDVVHALQEKG
                     SC"
     gene            complement(5452..6939)
                     /gene="murE"
                     /locus_tag="MOX77_002422"
     CDS             complement(5452..6939)
                     /gene="murE"
                     /locus_tag="MOX77_002422"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HCA3357930.1"
                     /translation="MADRNLRDLLAPWVAGLPARELREMTLDSRVAAAGDLFVAVVGH
                     QADGRRYIPQAIAQGVAAIIAEAKDEASDGEIREMHGVPVVYLSQLNERLSALAGRFY
                     HEPSENMRLVAVTGTNGKTTTTQLLAQWSQLLGETSAVMGTVGNGLLGKVIPTENTTG
                     SAVDVQHVLASLVAQGATFGAMEVSSHGLVQHRVAALKFAASVFTNLSRDHLDYHGDM
                     AHYEAAKWMLYSTHHHGQAIVNADDEVGRRWLASLPDAVAVSMEGHINPNCHGRWLKA
                     EAVEYHDRGVTIRFASSWGEGEIESCLMGAFNVSNLLLALATLLALGYPLTDLLKTAA
                     RLQPVCGRMEVFTAPGKPTVVVDYAHTPDALEKALQAARLHCAGKLWCVFGCGGDRDK
                     GKRPLMGAIAEEFADIVVVTDDNPRTEEPRAIINDILAGMLDAGQVRVMEGRAEAVTN
                     AIMQAKDNDVVLIAGKGHEDYQIVGTQRLDYSDRVTAARLLGVIA"
     gene            complement(6926..8692)
                     /gene="ftsI"
                     /locus_tag="MOX77_002423"
     CDS             complement(6926..8692)
                     /gene="ftsI"
                     /locus_tag="MOX77_002423"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000642204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan glycosyltransferase FtsI"
                     /protein_id="HCA3357931.1"
                     /translation="MKAAAKTQKSKRQEEQTNFISWRFALLCGCILLALVFLLGRAAW
                     LQIIAPDMLVRQGDMRSLRVQEVSTSRGMITDRSGRPLAVSVPVKAIWADPKEVHDAG
                     GISVGDRWKALSTALNIPLDQLSARINANPKGRFIYLARQVNPDMADYIKKLKLPGIH
                     LREESRRYYPSGEVTAHLIGFTNVDSQGIEGVEKSFDKWLTGQPGERIVRKDRYGRVI
                     EDISSTDSQAAHNLALSIDERLQALVYRELNNAVAFNKAESGSAVLVDVNTGEVLAMA
                     NSPSYNPNNLAGTPKDAMRNRTITDVFEPGSTVKPMVVMTALQRGIVNENTVLNTVPY
                     RINGHEIKDVARYSELTLTGVLQKSSNVGVSKLALAMPSSALVDTYSRFGLGKATNLG
                     LVGERSGLYPQKQRWSDIERATFSFGYGLMVTPLQLARVYATIGSYGIYRPLSITKVD
                     PPVPGERIFPESTVRTVVHMMESVALPGGGGVKAAIKGYRIAIKTGTAKKVGPDGRYI
                     NKYIAYTAGVAPASQPRFALVVVINDPQAGKYYGGAVSAPVFGAIMGGVLRTMNIEPD
                     ALATGEKNEFVINQGEGTGGRS"
     gene            complement(8708..9073)
                     /gene="ftsL"
                     /locus_tag="MOX77_002424"
     CDS             complement(8708..9073)
                     /gene="ftsL"
                     /locus_tag="MOX77_002424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000625658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HCA3357932.1"
                     /translation="MISRVTEALSKVKGSIGSNERHALPGVIGDDLLRFGKLPLCLFI
                     CIILTAVTVVTTAHHTRLLTAQREQLVLERDALDIEWRNLILEENALGDHSRVERIAT
                     EKLQMQHVDPSQENIVVQK"
     gene            complement(9070..10011)
                     /gene="rsmH"
                     /locus_tag="MOX77_002425"
     CDS             complement(9070..10011)
                     /gene="rsmH"
                     /locus_tag="MOX77_002425"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HCA3357933.1"
                     /translation="MMENFKHTTVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQ
                     LGEEGRLLAIDRDPQAIAVAQTINDPRFSIIHGPFSALADYVAERELTGKIDGILLDL
                     GVSSPQLDDAERGFSFMRDGPLDMRMDPTRGQSAAEWLQTAEEADIAWVLKTFGEERF
                     AKRIAHAIVERNREQPMTRTKELAEVVAAATPVKDKFKHPATRTFQAVRIWVNSELEE
                     IEQALKSSLSVLASGGRLSIISFHSLEDRIVKRFMREQSRGPQVPAGLPMTEAQLKKL
                     GGRELRALGKLMPGEKEVAENPRARSSVLRIAERTNA"
     gene            complement(10013..10471)
                     /gene="mraZ"
                     /locus_tag="MOX77_002426"
     CDS             complement(10013..10471)
                     /gene="mraZ"
                     /locus_tag="MOX77_002426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020325403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HCA3357934.1"
                     /translation="MFRGATLVNLDSKGRLTVPTRYREQLIESATGQIVCTIDIHHPC
                     LLLYPLPEWEIIEQKLSRLSSMNPVERRVQRLLLGHASECQMDGAGRLLIAPVLRQHA
                     GLTKEVMLVGQFNKFELWDETTWYQQVKEDIDAEQSATETLSERLQDLSL"
     gene            complement(11077..12081)
                     /gene="cra"
                     /locus_tag="MOX77_002427"
     CDS             complement(11077..12081)
                     /gene="cra"
                     /locus_tag="MOX77_002427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catabolite repressor/activator"
                     /protein_id="HCA3357935.1"
                     /translation="MKLDEIARLAGVSRTTASYVINGKAKQYRVSDKTVEKVMAVVRE
                     HNYHPNAVAAGLRAGRTRSIGLVIPDLENTSYTRIANYLERQARQRGYQLLIACSEDQ
                     PDNEMRCIEHLLQRQVDAIIVSTSLPPEHPFYQRWANDPFPIVALDRALDREHFTSVV
                     GADQDDAEMLAEELRKFPAETVLYLGALPELSVSFLREQGFRTAWKDDPREVNFLYAN
                     SYEREAAAQLFEKWLETHPMPQALFTTSFALLQGVMDVTLRRDGKLPSDLAIATFGDH
                     ELLDFLQCPVLAVAQRHRDVAERVLEIVLASLDEPRKPKPGLTRIRRNLYRRGILSRS
                     "
     gene            complement(12365..12856)
                     /gene="ilvN"
                     /locus_tag="MOX77_002428"
     CDS             complement(12365..12856)
                     /gene="ilvN"
                     /locus_tag="MOX77_002428"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001563086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HCA3357936.1"
                     /translation="MRRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLS
                     RMTIQTVGDEKVLEQIEKQLHKLVDVLRVSELGQGAHVEREIMLVKIQASGYGREEVK
                     RNTEIFRGQIIDVTPTLYTVQLAGTSDKLDAFLASLRDVAKIVEVARSGVVGLSRGDK
                     VMR"
     gene            complement(12859..14583)
                     /gene="ilvI"
                     /locus_tag="MOX77_002429"
     CDS             complement(12859..14583)
                     /gene="ilvI"
                     /locus_tag="MOX77_002429"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020079613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 3 large subunit"
                     /protein_id="HCA3357937.1"
                     /translation="MEMLSGAEMVVRSLIDQGVKQVFGYPGGAVLDIYDALHTVGGID
                     HVLVRHEQAAVHMADGLARATGDVGVVLVTSGPGATNAITGIATAYMDSIPLVILSGQ
                     VATSLIGYDAFQECDMVGISRPVVKHSFLVKQTEDIPLVLKKAFWLAASGRPGPVVVD
                     LPKDILNPAKKMPYVWPETVSMRSYNPTTSGHKGQIKRALQTLASAKKPVVYVGGGAI
                     SAACYAPLRHIIETFNLPVVSSLMGLGAFPATHRQSLGMLGMHGTYEANMTMHNADVI
                     FAVGVRFDDRTTNNLAKYCPNATVLHIDIDPTSISKTVNADIPVVGDARLVLEQMLEL
                     LAQDAPSQPQDDIRDWWQQIESWRARQCLKYDAESESIKPQAVIETLWRLTKGDAYVT
                     SDVGQHQMFAALYYPFDKPRRWINSGGLGTMGFGLPAALGVKMALPKEMVVCVTGDGS
                     IQMNIQELSTALQYELPVLVLNLNNRYLGMVKQWQDMIYSGRHSQSYMQSLPDFVRLA
                     EAYGHVGLQINRPDELESKLSEALEHVRNNRLVFVDVTVDGSEHVYPMQIRGGGMDEM
                     WLSKTERT"
     gene            complement(14905..15849)
                     /gene="leuO"
                     /locus_tag="MOX77_002430"
     CDS             complement(14905..15849)
                     /gene="leuO"
                     /locus_tag="MOX77_002430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator LeuO"
                     /protein_id="HCA3357938.1"
                     /translation="MPEVKTEKPHLLDMGKPQLRMVDLNLLTVFDAVMQEQNITRAAH
                     TLGMSQPAVSNAVARLKVMFNDELFVRYGRGIQPTARAFQLFGSVRQALQLVQNELPG
                     SGFEPTSSERVFNLCVCSPLDNILTSQIYNRVEKIAPNIHVVFKASLNQNTEHQLRYQ
                     ETEFVISYEEFRRPEFTSVPLFKDEMVLVASRKHPRISGPLLEGDVYNEQHAVVSLDR
                     YASFSRPWYDTPDKQSSVAYQGMALISVLNVVSQTHLVAIAPRWLAEEFAESLELQIL
                     PLPLKLNSRTCYLSWHEAAGRDKGHQWMEDLLVSVCKR"
     gene            16506..16592
                     /gene="leuL"
                     /locus_tag="MOX77_002431"
     CDS             16506..16592
                     /gene="leuL"
                     /locus_tag="MOX77_002431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leu operon leader peptide"
                     /protein_id="HCA3357939.1"
                     /translation="MSYIVRFTGLLLLNAFIVRGRPVGGIQH"
     gene            16680..18251
                     /gene="leuA"
                     /locus_tag="MOX77_002432"
     CDS             16680..18251
                     /gene="leuA"
                     /locus_tag="MOX77_002432"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016831521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HCA3357940.1"
                     /translation="MSQQVIIFDTTLRDGEQALQASLSAKEKLQIALALERMGVDVME
                     VGFPVSSPGDFESVQTIARTIKNSRVCALARCVEKDIDVAAQALKVADAFRIHTFIAT
                     SPMHIATKLRSTLDEVIERAVYMVKRARNYTDDVEFSCEDAGRTPVDDLARVVEAAIN
                     AGARTINIPDTVGYTMPFEFAGIISGLYERVPNIDKAIISVHTHDDLGIAVGNSLAAV
                     HAGARQVEGAMNGIGERAGNCALEEVIMAIKVRKDIINVHTNINHHEIWRTSQTVSQI
                     CNMPIPANKAIVGSGAFAHSSGIHQDGVLKNRENYEIMTPESIGLNQIQLNLTSRSGR
                     AAVKHRMEEMGYKDTDYNMGHLYDAFLKLADKKGQVFDYDLEALAFINKQQEEPEHFR
                     LDYFSVQSGSSDIATASVKLACGEEIKAEAANGNGPVDAIYQAINRITGYDVELVKYD
                     LNAKGQGKDALGQVDIVVNHHGRRFHGVGLATDIVESSAKAMVHVLNNIWRAAEVEKE
                     LQRKAQNKENNKETV"
     gene            18251..19342
                     /gene="leuB"
                     /locus_tag="MOX77_002433"
     CDS             18251..19342
                     /gene="leuB"
                     /locus_tag="MOX77_002433"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HCA3357941.1"
                     /translation="MSKNYHIAVLPGDGIGPEVMAQALKVMDAVRSRFDMRITTSRYD
                     VGGIAIDNHGHPLPKATVEGCEQADAILFGSVGGPKWENLPPESQPERGALLPLRKHF
                     KLFSNLRPAKLYQGLEAFCPLRADIAANGFDILCVRELTGGIYFGQPKGREGSGQYEK
                     AFDTEVYHRFEIERIARIAFESARKRRRKVTSIDKANVLQSSILWREIVNDVAKAYPD
                     VELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQE
                     FGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRYSLDADEAATAIEQAINRALEEGV
                     RTSDLARGAAAVSTDEMGDIIARYVAEGV"
     gene            19345..>20430
                     /gene="leuC"
                     /locus_tag="MOX77_002434"
     CDS             19345..>20430
                     /gene="leuC"
                     /locus_tag="MOX77_002434"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HCA3357942.1"
                     /translation="MAKTLYEKLFDAHVVFEAPNETPLLYIDRHLVHEVTSPQAFDGL
                     RAHHRPVRQPGKTFATMDHNVSTQTKDINASGEMARIQMQELIKNCNEFGVELYDLNH
                     PYQGIVHVMGPEQGVTLPGMTIVCGDSHTATHGAFGALAFGIGTSEVEHVLATQTLKQ
                     GRAKTMKIEVTGNAAPGITAKDIVLAIIGKTGSAGGTGHVVEFCGDAIRALSMEGRMT
                     LCNMAIEMGAKAGLVAPDETTFNYVKGRLHAPKGRDFDEAVEYWKTLKTDDGATFDTV
                     VTLRAEEIAPQVTWGTNPGQVISVTDIIPDPASFSDPVERASAEKALAYMGLQPGVPL
                     TDVAIDKVFIGSCTNSRIEDLRAAAEVA"
BASE COUNT         4972 a         5923 c         5110 g         4425 t
ORIGIN      
        1 ttcgggaacg caccgggaaa cgcctgcatc accgtggtcg cgattttggc cagccactga
       61 ttggttagcc cggcgatacc gttttgctca tgcaaaacga ccggaatacc caatgaccag
      121 gcggcaagac cgccggggcc ggaaacataa ccgcccattc ccagcacgac atccggctta
      181 aaccgcttca tgatcgcccg cgcctgccgc caggcgttaa aaatccgcag cggcgccgcc
      241 agaagcgctt ttacgccttt accgcgcaga ccggagatcc gaataaagtc aatatcgatg
      301 ccatgcttcg gcactaaatc cgcttccata cgatcggagg tacccagcca gcgaacctgc
      361 cagccctggg ccattaaatg atgcgcaacg gccagtccgg ggaacacgtg cccgccggta
      421 ccgcccgcca tcaccattaa ccgcttcggt tgaccactca tcgagaacct cgtgtaaacg
      481 cctgcgcttt ttccagacgc gtttcataat caatacgtaa taaaaacata atggccgtcg
      541 acataatcaa cagactcgac ccgccataac tgatcagcgg cagcgtaaga cctttggtcg
      601 gcagcatccc cgcggccgcg ccaacgttta ccagcgcctg aaaactaaac cagataccga
      661 tagaacacgc taaaaatccg gaaaaacggt ggtcaatctc caatgcctta cggccaatcg
      721 acatcgcgcg aaaagcgacg aaaaatacca ttaaaagcgc caataccaca ccgatataac
      781 ccagttcttc cccaataatg gcgaagatga aatcggtgtg cgcctccggc aaatactcca
      841 gtttctgcac cgaattcccc agcccttgcc cccatatctc accgcgacca aaagccatca
      901 gcgactgcgt cagctgataa ccgctgccga acggatcttc ccaggggttc cagaacgagg
      961 taacgcggcg aatacgatac ggttcggcga ggattaacag aatcaccgcc gagatgccca
     1021 tcccgataat ggcgatgaac tgccataatt tcgccccggc aagaaacagc atcgccagcg
     1081 tggtgacaaa cagtacgacc accgtcccga ggtcaggctg tgccagcagt aacaccgcca
     1141 gcaccagaat cacgcccatt ggttttaaaa agccgcgcag gttatttcgc acttcatcaa
     1201 ccttacgcac cagatagttc gcgaggtagc agaacagcga cagcttggta aactccgcag
     1261 gctgaatacg cagcggcccc agcgcaatcc agcgcgacgc cccgttaacc gagctcccga
     1321 cgaccagcac gataagcagc ataatgatcg acgcaatcag catcgtcgtg ctgtattttt
     1381 gccagaaggt catgggcaaa cgtagcgtga ccatcgccag acaaaatgcc aggaagatat
     1441 agagcgcatc acgtttggca aacaaaaacg gatcgttcgc caggcgctgc ccgactggca
     1501 tggaggccga cgtcaccatg acaaaaccaa tcgccgccag cccgaaggtc agccatagca
     1561 gcgtgcggtc atacatgatc agactgtcgg cgtctttatc gcgcgaagcc atcacccagc
     1621 ctttaagcgc cgcaaacagc caggccagga ggccaaagcc tggtacgcgc ggcattctca
     1681 gacgggggag agataaacgc atcaacctaa ctccttcgcc agacgggtaa agacatcgcc
     1741 ccgttgctca aaatttttaa actgatcgag gctggcgcag gcgggcgaca acagcaccat
     1801 atcacccggc tgaacgtgcg gcgccagcaa acgcatcgcc tcttccatcg tctcagtctg
     1861 ttgggcgatt tccggacgca gtgcggcaag ctgcgcgcca tcgcgcccaa agcaatacag
     1921 gcggatacga tcgccggtca gatagcgcgc cagcggagaa aagtctgccg acttaccgtc
     1981 gccgcccagc agcagatgca gcgtaccgtc cacatgcaaa ccgtttagcg ccgcttcggt
     2041 actgccgaca ttggtcgctt tcgagtcgtt gatccaacga acgccgttat gctccaacgc
     2101 cagctggaag cgatgcgcca gaccggtaaa tgtcgtcaac gccttcaaac tgctggcgcg
     2161 cggcagacct acggcatccg ccagcgccag cgccgctaac gcattggtat agttatgctg
     2221 accggaaagc ttcatctctt tcacgttcag caccttctca cctttgactc gtagccaggt
     2281 ttcgccctgc tgacgattaa ggtgataatc acccatattg acgccaaagc tgacgcagcg
     2341 ctcatcggcc ccgcgtaccg gcatcgtcaa cgcgtcatcg gcattcacta cgcacacttt
     2401 cgccttctcg tagacgcgca gtttcgccgc ccggtactgt tgcaaaccaa acggataccg
     2461 gtccatatga tcttcagtga cgttgagcac cgttgccgcc gccgcttgca aacttgaggt
     2521 agtttccaat tggaaactgg ataattccag cacgtacaat tcgcgatcgg catccagcag
     2581 catcagcgcc ggaagaccga tattgccgcc aacgccgaca ttgacgcccg ccgccttcgc
     2641 catctcgccc actaaggtgg tcacggtgct tttgccgttc gagccggtga tggccacaat
     2701 cggcgcttgc gcttcgcggc aaaacagttc gatatcgccg acaatttcca ctccagcgct
     2761 ggcggcagcg ctaagagagg gatgcgccag agcaatacca gggctggcga cgattaaatc
     2821 cgccgctaag agccactcgt cgttcaggcc gccaacgtga cgctcaacct cttgcggcag
     2881 cttatccaga cccggcggcg tcacgcgagt atccatcacc cgcggcgtca cgccgcgggc
     2941 gagaaaaaag tccacgcaag agagtccggt taagcccaga ccgataatga cgacgttttt
     3001 gtcctggtaa tcagccatga ttaacgtacc ttcagcgttg ccaggccaat cagcaccagc
     3061 atcagcgaaa taatccagaa gcgcacaatc acgcgcggtt ccggccagcc tttcagttca
     3121 tagtggtgat ggataggcgc catacggaaa atacgctgtc cgcgtagttt aaaggaaccc
     3181 acctgcagga tgaccgacag agtttccacc acaaagacgc cgcccatgat caccagcaga
     3241 aattcctgac gcagcagcac ggcgataatg cccaacgcgc cgcccaacgc cagcgatccg
     3301 acatcgccca taaaaacctg cgccggatag gtgttaaacc acaagaatcc taatcccgcg
     3361 ccgacaatcg ccgtacagac aatcaccagc tcgcccgcat ggcgtaaata cggaatatgc
     3421 aggtaattgg cgaagttcat gttcccggtc gcccaagcca ccagcgcaaa gccggcggca
     3481 acgaagacag tcggcataat cgccagacca tcaagcccgt cggtcaggtt tacggcgtta
     3541 cccgtaccga cgatgacaaa gtaggacagc agaatgtaaa acagccccaa ttgcggcata
     3601 acatctttaa agaacggcac caccagttgg gtcgcgggcg tgtctttccc gacgagataa
     3661 agcgcaaagg ccacgccgag cgcgataacc gacatccaga aatatttcca gcgcgcaatc
     3721 agccctttgg tatctttccg caccactttg cggtagtcat cgacaaaacc gataatgccg
     3781 tagccgatca ataccaccag cacgcaccag acgtacgggt tagacgggta agcccataac
     3841 agaacggaaa tcacaatcgc cgtcaggatc atgatgccgc ccatcgtcgg cgtaccgcgt
     3901 ttactgaagt gcgattccgg gccatcgtta cgtaccacct ggccaaaaga gagtttttgc
     3961 agacgagcga tcatacgcgg gcccatccat aaagagatga acagcgcggt caacaggctg
     4021 acgatggcgc gaaacgtcag ataagaaaag acgttaaagc cggaataata tttgaccaaa
     4081 tgctcggcca gccaaactaa catgaacctt tctcctgtaa cgcatgaacc acatcttcca
     4141 tcgcggcgct gcgtgatcct ttcactaaaa tagtcatcat cggttgctcc tgaagcagag
     4201 cgtgtaaacg cgcaatgagc gcggctttat cggcaaaatg ttcgccgacg ccgctggcgt
     4261 ggctgataac ctgactgagt tttccggtgc ttaacacgcg atcaataccc gccgcttttg
     4321 cggcctcgcc aacctggagg tggcacgctt cgctttctgc gcccagctcg gccatatcgc
     4381 ctaccaccag cacgcggtag ccgggcattt cagaaaggac ctgcactgcg gcggtcatcg
     4441 aaccgacgtt ggcgttataa gcgtcatcca gtaccagttg gttttcactt agttgaatcg
     4501 ggaacagacg cccgggtacg gcttttaacg ccgccagccc tgctttaacc gccgccagcg
     4561 tcgcccccac cgccattgat aaagcagcgg ccgccagcgc gttggcaata ttgtgccgcc
     4621 ccggcaacgg cagcagcaca tcaatgctgc ccatcggcgt ttgcagggta aattcggtac
     4681 cgtgtgacgt cacgtggata ttcgcagcgg taaagtcgct gtttgccgca ttcggcgaaa
     4741 agcgccacac ctgacgatcg ccaataatgc tttgccagtt cagccagtca ttattatcgg
     4801 cattcataat cgcgataccg ttctcaggca aaccggtata gatttcgcct ttcgctttcg
     4861 ccacgccggc cagcgagccg aaaccttcca gatgcgccgc cgccaggtta ttgaccagcg
     4921 ccgcttccgg gcgcgtcagg ctaacggtcc aggcgatttc tccctggtga ttagcgccta
     4981 actcgatcac cgcatagtca taatcatggt ttaagcgcag cagcgttatc ggcacgccga
     5041 tgtcgttgtt aaaattgctt gcggtataca aagtatttcc gcactggcta agaatcgcgg
     5101 cggtcatctc tttgaccgag gttttgccgg acgaaccggt taacgccacc acccgcgccg
     5161 gtacctgcat acgtacccag gcggccagtt ggccaaatgc ctgacgcgtg tcttttacaa
     5221 tcacctgcgg aagatcgata tccagaggac gactgaccag cagggcgcca gcgccgttcg
     5281 cttttgcttt atcagcaaaa tcatgcgcat caaagcgttc ccctttcagc gccacgaaca
     5341 ggcatcccgg cgtcactttc cgtgtgtcgg taatgaccgt atcgagcgtg agatccgccc
     5401 cgcggtgttc ggcgccaagg acatcggcaa ttttgctgag cgttacgcta atcatgcgat
     5461 cacccccagc aaacgcgctg cggtcacgcg gtctgaataa tcaagacgct gcgtgccgac
     5521 aatctggtaa tcctcgtgcc ctttacctgc aatcagcacg acgtcattgt cttttgcctg
     5581 cataatggca ttggttaccg cctcagcgcg gccttccatt accctgacct gcccggcgtc
     5641 cagcattccg gccagaatat cgttgataat ggcgcgcggc tcctcggtac gcgggttatc
     5701 gtcagtcacc acgacgatat ccgcgaattc ttcggcaatg gcccccatga gtgggcgctt
     5761 acctttgtca cgatccccgc cacagccaaa gacgcaccac aattttccgg cgcagtgcag
     5821 gcgcgccgcc tgcaatgctt tttccagcgc atccggcgtg tgcgcgtaat ccaccaccac
     5881 cgtcggtttg cctggcgcag tgaacacttc catacgcccg caaaccggct gcaaacgcgc
     5941 ggcggttttc agcaaatccg ttaacggata gcccagcgcc agcagcgtcg ccaatgccag
     6001 cagtaagttg ctgacgttaa acgcgcccat caggcagctt tcgatttcgc cttcacccca
     6061 gcttgaagca aaacgaatcg tcactccgcg gtcgtggtac tccaccgcct ccgctttcag
     6121 ccaacgaccg tgacagttag ggttgatatg cccttccatt gaaaccgcga ccgcatcggg
     6181 tagcgacgcc agccagcggc gtccaacttc atcatcggcg ttgacgattg cctgaccgtg
     6241 atggtgggtg gaataaagca tccattttgc cgcctcgtaa tgcgccatat cgccatgata
     6301 gtcgagatgg tcgcggctca aattagtaaa cacggaggcg gcaaatttca gcgccgccac
     6361 gcgatgctgc accaggccgt gagaagagac ttccatagcg ccgaaggtcg cgccctgcgc
     6421 aaccagactg gccagcacat gctgaacatc cactgcggaa ccggttgtgt tctccgtcgg
     6481 gatcacttta cccaacagtc cgttacctac cgtccccatc actgcgctgg tttcgccgag
     6541 caactggctc cactgcgcca gtagttgggt ggtggtggtc ttgccattgg tgccggtcac
     6601 cgccaccaga cgcatgtttt cagatggctc atggtaaaag cggcccgcca gcgcagataa
     6661 acgctcattg agctggctga gatagacgac tggtacgccg tgcatttcgc gaatctcacc
     6721 gtcactcgcc tcgtctttcg cctctgcaat aatggcagct acgccttgcg ctatcgcctg
     6781 cgggatataa cgacgcccgt ccgcctgatg acccaccact gccacaaaga gatcgcccgc
     6841 cgcagccaca cggctgtcga gcgtcatctc tcgcagttct cgcgcgggta gtccagccac
     6901 ccacggagca agaaggtcgc gcaaattacg atctgccacc tgttccctcg ccttgattaa
     6961 ttacgaattc atttttttcg cccgttgcca gcgcgtccgg ttcgatgttc atggtgcgca
     7021 gaacgccgcc catgatggca ccaaataccg gcgcggaaac ggcgccgccg tagtatttac
     7081 ccgcctgcgg atcgttgatg acaaccacca gcgcgaagcg cggctgactc gcaggcgcga
     7141 cgcctgcggt gtaagcaatg tatttgttga tgtagcgacc gtccggcccc acttttttcg
     7201 ccgtaccggt tttaatcgcg atacggtagc ctttaattgc cgccttcacg ccgccgccgc
     7261 ccggcagcgc cacgctttcc atcatatgca ccacggtgcg tacggtggat tcagggaaga
     7321 tgcgttcgcc gggtacaggc ggatcaactt tggtaatcga cagcgggcga taaatgccat
     7381 agctgccgat cgttgcataa actcgcgcta actgtaacgg cgttaccatt agcccgtagc
     7441 cgaaagagaa ggtggccctc tctatgtcgg accaccgttg tttttgagga tataagccac
     7501 tgcgttctcc gaccaacccc aaattggtcg cctttcctag cccaaaacgt gagtaagtat
     7561 ctactaacgc tgaggacggc atcgctaacg ccagtttgga tacaccgacg ttactcgact
     7621 tctgtagaac cccagtcagg gttaattcgc tgtagcgcgc cacgtcttta atttcgtggc
     7681 cgttaattcg gtatggaacg gtattcaaca ccgtattttc gttgacgata ccgcgctgaa
     7741 gcgcagtcat caccaccatc ggcttaaccg tagaacccgg ttcaaacacg tcggtgatgg
     7801 tacggttacg catcgcgtct ttcggcgtac cggcaaggtt gttggggtta taggaagggc
     7861 tattcgccat cgccagtact tcaccggtat tgacatcgac cagcaccgcg ctaccggatt
     7921 ccgccttgtt aaacgccacc gcgttgttca gttcgcggta aaccagcgcc tgtaagcgtt
     7981 catcaatgct taacgccagg ttgtgcgctg cctgactgtc agtggaggag atatcctcaa
     8041 tcacgcggcc atagcggtct ttacgcacga ttcgctcgcc aggctgaccg gtaagccact
     8101 tatcaaagct cttttcaacg ccttcaatcc cctgactgtc aacgttggta aaaccgatga
     8161 ggtgagcggt tacttctcct gacgggtagt agcggcgtga ttcttcacgc aaatgaatcc
     8221 ccggcagttt gagttttttg atgtagtccg ccatgtcagg atttacctgg cgcgccagat
     8281 aaataaaacg ccctttcggg ttggcgttga tacgggcgga gagctgatcg agcggaatat
     8341 tgagcgcagt agaaagcgct ttccagcgat cgccgacgct gatgccgccg gcgtcatgaa
     8401 cttctttcgg gtcggcccag atcgccttaa ccggtacgct gaccgccagt ggacgcccgg
     8461 aacggtcggt aatcataccg cgtgaggtgg agacttcctg aacacgcagc gaacgcatat
     8521 cgccctgacg caccagcata tccggggcga taatctgtag ccacgccgcg cgtccaagta
     8581 aaaaaaccag cgccagtaaa atacagccgc acagcaacgc aaaacgccaa ctgatgaagt
     8641 tggtctgttc ttcctggcgc ttcgattttt gcgtttttgc cgctgctttc atgcgtcgcg
     8701 tttatcctta tttttgcact acgatatttt cttgggacgg atcaacatgc tgcatttgca
     8761 gcttttccgt tgcgatccgc tctacccggc tgtgatcgcc gagcgcattt tcttcaagga
     8821 tcaggttgcg ccattcaatg tccaatgcat cgcgctccag aaccagttgt tcacgctgag
     8881 cggtgagtaa acgagtatgg tgcgccgtcg tgaccaccgt caccgccgtt aaaatgatgc
     8941 aaatgaacaa gcagagtggc agcttcccga accgcaaaag atcgtcaccg atcacgccag
     9001 gcaaggcatg gcgctcgttg cttcctatcg atcccttaac tttgcttagg gcttctgtca
     9061 ctctgctgat catgcgttcg tcctctctgc gatacgcaga actgaactac gggcccgagg
     9121 attttcagct acctcttttt cacccggcat caacttgcct aacgctcgta actcacgacc
     9181 gcccagtttt ttgagctgcg cttccgtcat cggtaatccc gccggtacct gcggaccgcg
     9241 gctttgctca cgcataaagc gtttcacaat acggtcttcc agcgagtgga aactgatgat
     9301 tgaaagccgc ccgcctgagg ccagtacgct gagcgagctt tttagcgcct gctctatctc
     9361 ctccagttca ctgtttaccc agatgcgcac cgcctggaag gtacgggtcg cgggatgttt
     9421 gaatttgtct tttaccgggg tcgccgccgc aaccacttcc gccagctctt tggtgcgggt
     9481 catcggctgt tcgcgattgc gctcaacaat ggcgtgagca atacgtttgg caaaacgctc
     9541 ctcgccgaat gttttcagca cccaggcgat atccgcctcc tccgccgttt gtaaccactc
     9601 ggcggcagac tggccgcgcg tcgggtccat tcgcatatcc agcggaccgt cgcgcataaa
     9661 tgaaaaaccg cgctccgcat cgtcaagctg cggagaagag acgccaagat cgagaaggat
     9721 cccgtcaatc ttgccggtaa gctcgcgctc ggcgacataa tcagccagcg cggaaaaagg
     9781 tccatgaatg atggagaagc gaggatcatt aatggtctgc gcaacggcga tcgcctgcgg
     9841 atcgcgatcg atcgccagca agcgcccctc ttcgcccagt tgcgagagga tcaggcgcga
     9901 gtggccgccg cgaccaaatg tgccatcaat atagatacca tccggacgaa tattcagccc
     9961 attaacggct tcatccaaca gtaccgtagt gtgtttaaaa ttttccatca tcttatagag
    10021 acaagtcctg cagccgctcc gataacgttt cggtagctga ctgttcagcg tcgatatctt
    10081 ccttgacctg ttgataccag gtcgtttcat cccacagctc aaatttgttg aactgtccaa
    10141 ccagcatcac ttctttcgtc agtccggcat gttgccgcag aactggcgcg atcagtaatc
    10201 gacctgcacc atccatctga cattcactgg catggcccaa cagtaaacgc tgtacgcgac
    10261 gttctaccgg gttcatgctc gacagacgag ataacttttg ctcaataatt tcccattcag
    10321 gcagggggta aagcagcagg catgggtgat ggatgtcaat ggtacatact atttgaccgg
    10381 tagcgctctc gatcagttgc tcccgataac gggtcggcac ggtcaggcgc cctttactgt
    10441 cgagattgac taacgttgcc ccccggaaca tgccagtctc accccttctt accactttat
    10501 cccacaaatt cccactcgaa ggagtttacg gagcggagga aaagcttgtc aagcaagtca
    10561 caacgcttac cgaagtaaaa aagccaatgt ttacggcgaa tatctgcgtt gattaatttc
    10621 cgcccagcgc gcaagccaaa ttaacgttat gaatatttgt aagaaaaaaa ccaaagaccc
    10681 accgccgttt aaaacggact caatataatc cgagaaaaat ataaagtgtc agtttgcgac
    10741 gcgagcggca ttttaggaca tattgcaccg tgttaacagt gcctgtttaa cgtgtgcggc
    10801 gcctgctata ccagcgccta caagcgactg tcgcgccaaa gacaaaaagt ggctgttaat
    10861 tcgacgattt cttgcctgct tgtaacaaaa caatacaaag gaaaagactc gttacgtctt
    10921 aattagtgga atatggacga tttcggacaa aagaaaggta ataaaaaaga attttcggat
    10981 aattttaagg aataatctta attatttaag ggatattttt actgatacgc atttgtttga
    11041 cggcggcaga agagagagtc ttttaccgcc ggtcctttag ctacggctca gaatgccgcg
    11101 acgatacagg tttcgccgaa tacgcgttaa gccgggtttc ggtttacgcg gttcatcaag
    11161 acttgccagc acaatctcca gcacgcgttc cgcgacatca cgatgacgct gcgccaccgc
    11221 cagtaccggg cattgcagaa aatccagcag ctcatgatcg ccaaaggtcg caatcgctaa
    11281 atccgaaggc agttttccat cgcgccgcag cgtaacgtcc atcacgccct gtaatagcgc
    11341 gaatgatgtc gtaaagagcg cctgcggcat aggatgcgtt tccagccatt tctcaaacag
    11401 ctgcgcggcg gcttcgcgct catagctgtt ggcatataag aaattcacct cccgcggatc
    11461 gtctttccat gcggtgcgga acccctgctc gcgcaggaaa ctgacggaca actccggcag
    11521 cgcgcccaaa taaagcaccg tttccgccgg gaatttacgc agctcttccg ccaacatctc
    11581 ggcatcatcc tgatcggcgc cgaccacgct ggtgaaatgt tcgcgatcca gcgcgcggtc
    11641 gagcgcgacg atggggaacg gatcgttggc ccagcgctga tagaagggat gctccggcgg
    11701 taacgaagtt gaaacaatga ttgcatccac ctggcgttgc aaaaggtgct caatgcagcg
    11761 catttcgtta tccggctgat cttcagaaca ggcgatcagc agttggtagc cacgctggcg
    11821 tgcctggcgc tcaagatagt ttgcgatacg ggtgtagctc gtgttttcaa ggtccgggat
    11881 caccagacca atggaacgtg tgcgtccagc acgcagcccg gcagccacag cgttaggatg
    11941 gtaattgtgc tcacgcacta ccgccatgac tttttctacg gttttgtcgc tcacgcggta
    12001 ttgctttgct ttaccgttta taacgtagct tgcagttgtg cgcgagacac cggccagccg
    12061 agcgatttca tccagtttca caattgcccc ttgtgtaaat tgtacaaacc ataaccttta
    12121 tgtcggcatg ggttaaaatc gttaacatct aagcgcagtt tgatcactcc ggcaaccgct
    12181 tttattccgg gttaccacgg atttcgcaaa aaaaagccca accgatgata ttgggttggg
    12241 cgataattcc tgttggctga tatccggcaa acctgcctga tggcgctacg cttatcggac
    12301 ctgggccaga tatcagcctg tagaccggat aaaacgcaag cgcgtcgtca tccggcgaat
    12361 ctgctcagcg cataacctta tcgccgcgcg aaagcccgac gacgcctgaa cgcgccactt
    12421 caacaatttt cgccacatcg cgcagcgagg ccagaaaagc atccagttta tcgctggtgc
    12481 ccgccagttg aacggtatac aacgttggcg taacgtcaat aatctgacca cggaaaattt
    12541 ccgtattacg cttcacctct tcccgtccgt agccgctggc ctggattttc accagcatga
    12601 tttcccgctc aacgtgcgct ccctgtccca gctcgctgac gcgcagcaca tcaaccagct
    12661 tgtgcagttg cttttcaatt tgctcaagca ctttttcatc gcctaccgtc tggatagtca
    12721 tgcgcgacaa cgtcggatcg tctgtcggcg caacggtcag gctttcaata ttatatccgc
    12781 gttgcgaaaa gaggccgata acccgcgata acgccccaga ttcgttttcc agtaataccg
    12841 ataaaatccg gcgcatcatc aggtcctctc cgttttgctt aaccacattt cgtccatccc
    12901 gcccccgcga atctgcatcg gatagacatg ctcgctgcca tcaacggtga catcgacgaa
    12961 caccagtcgg ttattacgca catgctcaag ggcttcgctg agtttacttt ccagctcatc
    13021 cggacggtta atctgcagcc cgacatggcc atatgcttcc gccaggcgca caaaatccgg
    13081 taacgactgc atataagact gagaatggcg accggaatag atcatatcct gccactgttt
    13141 caccatcccc aggtaacggt tgttcaggtt cagaaccagt accggcagtt catactgtaa
    13201 ggctgtcgac agctcctgaa tgttcatctg tatactgcca tcgccggtca cgcagaccac
    13261 catttctttc ggcagggcca ttttaacgcc cagtgcagcc ggtaggccaa accccatcgt
    13321 gccgagcccg ccagagttaa tccagcgacg tggcttatcg aacgggtagt agagggcggc
    13381 aaacatctgg tgttgtccta catcggacgt cacgtacgca tcacccttcg tcagacgcca
    13441 gagagtttca atcaccgcct ggggtttaat gctttcgctt tccgcgtcat atttcaggca
    13501 ctgacgggcg cgccagctct ctatctgctg ccaccagtcg cgaatatcat cctgcggctg
    13561 agacggcgca tcctgcgcca gtagctccag catttgttcc agtaccaggc gtgcatcgcc
    13621 caccaccggg atatcagcgt taaccgtttt ggatatggac gtcgggtcaa tgtcgatgtg
    13681 taataccgtc gcgttcggac aatatttagc gagattattc gtcgtgcggt cgtcaaatcg
    13741 tacgccaaca gcgaaaatca cgtcggcgtt atgcatggtc atattggctt cataagtgcc
    13801 atgcattccc agcattccta acgactggcg atgagtagca ggaaacgcgc ccagtcccat
    13861 taatgaagag accaccggca ggttaaaggt ttcaatgatg tggcgcagcg gcgcatagca
    13921 ggccgcgctt atcgcccctc ccccaacata gaccaccggc ttttttgccg acgccagcgt
    13981 ttgcaaggca cgcttaattt gtcctttatg tcctgatgtt gtgggattgt aagagcgcat
    14041 actgaccgtt tccggccaga catacggcat ttttttcgcc ggattcaaaa tatctttcgg
    14101 cagatccacg accaccggcc caggacgtcc gcttgccgcc agccagaagg cctttttaag
    14161 caccagggga atatcttccg tctgtttgac caggaagcta tgtttgacca ccggtcggga
    14221 aatccccacc atgtcgcact cctgaaaggc atcatagcca atcaatgagg tggcgacctg
    14281 gccggaaaga atcaccagcg gaatggaatc catataggcc gtagcaatcc ctgtaatcgc
    14341 attggtcgct cccggtccgg aagtcaccag caccacgcca acgtcgccag tggctcgcgc
    14401 caggccatcc gccatatgca ccgcggcctg ctcatgacgc accagcacat gatcgatccc
    14461 tccaacggta tgtagcgcat cataaatatc aagcactgcg cctccaggat agccgaacac
    14521 ctgctttacg ccttgatcga taagcgatcg gacgaccatc tcggctccag acaacatctc
    14581 cacggcttgc ctccacttta tacctgtcat cacggtttga cggacacctt aaccgctcgc
    14641 tatcacgcct ggcaattggg tggaatgacg taaagatggg gaaggttaga ataatcagga
    14701 ggcaagaaga gaagaaatgg agaaatactc cgtctgaatc acaccaggta ataaataatc
    14761 gcttataaat gcagacttac agcaattcat ctatttttca cagcgacgaa aagaatcgct
    14821 caccgttaat tcagcataaa atttttgaca tacgctaaaa agcagaataa accagaattt
    14881 gtttctgatt tattctgccc ggttttatcg cttacaaaca gagactaata aatcttccat
    14941 ccattgatgc cctttatcac gcccagccgc ttcatgccag gaaaggtagc atgtccggct
    15001 attcagtttt aaaggcaacg gcagtatttg cagctccagc gactccgcaa actcttccgc
    15061 cagccagcgc ggggcaatag cgaccaaatg cgtctgcgaa accacgttca gaacgctgat
    15121 aagcgccatg ccctgataag ccacgctcga ctgtttatcc ggcgtgtcat accacggccg
    15181 actaaatgac gcataacgat cgagagaaac aaccgcatgt tgttcattat aaacatcgcc
    15241 ttccagtagc gggccgctaa tacgcgggtg ttttcggctg gcgactaaaa ccatttcatc
    15301 tttaaatagc ggtacgctgg taaactcagg acgacggaat tcttcataac taataacgaa
    15361 ctcggtttcc tgatagcgta actgatgctc agtattctga ttcaacgacg ctttaaaaac
    15421 gacatgaata tttggcgcaa ttttttctac acgattataa atctgtgacg tcaggatatt
    15481 atccagcgga ctgcacacgc aaagattgaa tacacgttcg ctgctggtcg gctcaaaccc
    15541 cgatcccggc aattcatttt gcaccaattg caacgcctga cggactgaac caaataactg
    15601 aaatgcacgg gcagtcggct gaattcctcg tccatatcga acaaaaagtt cgtcattaaa
    15661 cataaccttc agacgcgcta cggcgttact gaccgcaggc tgcgacattc ccagcgtgtg
    15721 ggcggcgcgc gtaatattct gctcttgcat taccgcatcg aacacggtca ataggttcaa
    15781 atcaaccatg cgaagctgtg gtttgcccat atctaaaaga tgcggctttt cggttttgac
    15841 ctctggcata tttaactcca ctgtcacgct taactccctt tttctggctg aaggcagaaa
    15901 taattcctga aaatatgatt taccatgcat ataaaataag aaaaagggaa agcgttaaaa
    15961 ttcggaaaac ataaagacgc tgacagagac aaatagaatg ccagcgcaag cgtaatatgt
    16021 cctgagtcac accattgcga ttcataatgt ttaaattacg caagcaatat aaccataact
    16081 atggcgaata cacaatcata caccaagtga atgatcattt aagtttcaat taaatgttta
    16141 tattattaat agctaaaaag ttaacattaa tttatcaata actttatcct tatccattaa
    16201 gcaaacaagg ttatttgtta aaatataaaa caaatcaaaa agataaacca aacctttagc
    16261 atacctttaa caggccattc ccctaaccaa tttgcaaaca aaaatgccta aatatttcaa
    16321 acaatgaaaa gtatgaatgt ccactcgttc ttttatcctt tattggacgc gcagcccagc
    16381 acaattagct aaagtacgta tccggatatc gtcaacaaaa tgcaatggcg acagaaaata
    16441 gagttgacat taaacggcat atccagtacc actaaaagca taacgcattc gctggagctg
    16501 aattaatgtc atatatcgtt cgtttcactg ggctactact actcaacgca tttattgtgc
    16561 gcggtagacc ggtgggcggc attcaacatt aagtcagctc gaagtcaaac aaaacccgcg
    16621 ccgttgtgcg ggttttttta tgcctgacgc aaggcgcccc tggagacaag gaccacatca
    16681 tgagccagca agtcattatt tttgatacga ccttacgcga cggcgaacaa gcgttacagg
    16741 ccagcctgag cgcgaaagag aagctgcaga ttgccctggc ccttgagcgc atgggtgtcg
    16801 atgtcatgga agtgggcttc ccggtctctt ctccgggtga ttttgaatcc gtccaaacca
    16861 tcgcccgcac catcaaaaac agccgcgttt gcgccctggc gcgttgtgta gaaaaagaca
    16921 tcgacgttgc ggcacaggcg ctgaaggtcg ccgacgcgtt tcgtatccat acttttatcg
    16981 ccacctcgcc aatgcacatc gccaccaagc tgcgcagcac gctggatgag gtcatcgaac
    17041 gcgcggtata catggttaag cgggcgcgta attacactga tgacgtggag ttctcctgcg
    17101 aggatgctgg ccggacgcct gttgacgatc tggcgcgcgt ggtggaagcc gctataaacg
    17161 ccggcgcgag aaccatcaat attcccgata ccgtgggcta taccatgccg tttgagttcg
    17221 cgggaatcat ttccggtctg tatgaacgtg tccccaatat cgacaaagct atcatctccg
    17281 ttcataccca cgacgattta gggatagcgg taggcaactc gctggcggca gtacatgcgg
    17341 gcgcgcgtca agttgaaggc gcgatgaacg gtatcggaga acgtgccggt aactgcgcgc
    17401 tggaagaggt gatcatggcg attaaagtgc gcaaagacat cataaacgta cacaccaaca
    17461 tcaatcacca cgaaatctgg cgcaccagcc agaccgtcag ccagatctgt aacatgccga
    17521 tcccggccaa caaagcgatt gttggcagcg gcgcttttgc ccactcttcc ggcatccacc
    17581 aggatggcgt cctcaagaac cgcgaaaact atgaaatcat gacgccagag tccatcggtc
    17641 tgaaccagat acagctgaac ctgacctccc gctctggccg tgccgccgtg aaacatcgca
    17701 tggaagagat gggttacaag gacacagact acaacatggg ccacctgtac gacgcgttcc
    17761 tgaagctggc ggacaaaaaa ggccaggtgt tcgactatga cctggaagcg ctggcgttta
    17821 ttaataaaca gcaagaagaa ccagagcatt tccgtctgga ttacttcagc gtgcagtccg
    17881 gctccagcga tatcgccacc gcttccgtga agctggcctg tggtgaagag atcaaggccg
    17941 aggcggcgaa cggcaacggc ccggtcgacg ccatctatca ggcgattaac cgcatcactg
    18001 gctacgacgt tgagttggtt aaatacgacc tgaacgccaa aggccagggc aaagacgcgc
    18061 tgggtcaggt cgatatcgtc gtgaaccatc atggtcgccg cttccacggc gtcgggctgg
    18121 cgacggatat cgtcgaatcc tccgccaaag cgatggtaca cgtactgaac aatatctggc
    18181 gcgccgccga agttgaaaaa gaattgcaac gcaaagctca aaataaagag aacaacaagg
    18241 aaaccgtgta atgtcgaaga actatcatat tgccgtactg ccgggcgacg gtatcggccc
    18301 ggaagtcatg gcgcaagccc tgaaagttat ggatgcggta cgcagccgtt ttgatatgcg
    18361 tatcaccacc agccgctatg acgtcggcgg tattgctatc gacaatcatg gtcatccact
    18421 gccgaaagcc accgttgaag ggtgtgagca ggcggatgcc attctgtttg gctccgtcgg
    18481 cggcccgaaa tgggaaaatt tgcccccgga aagccagccg gagcgcggcg ccctgctgcc
    18541 gctgcgcaaa catttcaaat tattcagtaa cctgcgtccg gcgaaactgt atcagggact
    18601 ggaagcattt tgcccgttgc gcgccgatat cgccgctaac ggtttcgata tcctgtgcgt
    18661 gcgcgagctg accggcggga tctatttcgg acagccaaaa ggccgtgaag gcagcggtca
    18721 gtacgaaaaa gcctttgata ccgaagttta tcaccgcttt gagatcgagc gcattgcccg
    18781 tatcgccttt gaatcggcgc gtaaacgccg ccgtaaagtc acctctatag ataaagccaa
    18841 cgtactgcaa agctctatcc tgtggcgtga gatcgtcaat gatgtcgcga aagcgtatcc
    18901 cgatgtggaa ctcgcgcaca tgtatatcga taacgccacc atgcagttga ttaaagaccc
    18961 gtcgcagttt gacgtcctgc tgtgctctaa cctgttcggc gacattctgt ccgacgaatg
    19021 cgccatgatc accggctcaa tggggatgtt gccctccgcc agcctgaacg agcaagagtt
    19081 tggcctgtat gaaccggctg gcggctccgc gccggatatc gctgggaaaa atatcgccaa
    19141 cccaattgcg cagatcctgt cgctggcgct gctgctgcgc tacagcctgg atgccgatga
    19201 ggcggcaacg gccattgaac aggcgatcaa tcgcgcatta gaagaggggg ttcgcaccag
    19261 cgatttagcc aggggcgctg ccgcagtcag taccgatgag atgggcgata ttatcgcccg
    19321 ctatgtcgca gaaggggtgt aatcatggcc aaaacgttat acgaaaaatt atttgatgcc
    19381 cacgtggtct ttgaggcgcc aaacgaaacg ccgctgctgt acatcgatcg ccacctggta
    19441 cacgaagtga cctcgccgca ggcgtttgac ggtctgcgcg cgcaccatcg tccggtacgt
    19501 cagccgggga aaaccttcgc cacgatggat cacaacgtct cgacgcagac taaagacatt
    19561 aatgcttctg gtgaaatggc gcgtatccag atgcaagagc tgattaagaa ctgtaacgag
    19621 ttcggcgtcg agctgtatga cctgaatcac ccatatcagg gcatcgtcca tgtgatgggg
    19681 ccggaacagg gcgttaccct gccgggtatg accatcgtct gcggcgactc ccacaccgct
    19741 acccacggcg cgtttggcgc gttggccttc ggcatcggca cttctgaggt agaacatgta
    19801 ctggcgacgc aaaccctgaa acaggggcgc gctaaaacca tgaagattga agtcacgggc
    19861 aacgccgcac cgggcattac cgccaaagac atcgtgctgg cgatcatcgg taaaactggt
    19921 agcgccggcg gcaccggaca cgtggttgaa ttttgcggcg acgctatccg cgcgctgagt
    19981 atggaaggcc gcatgacgct gtgcaatatg gcgattgaga tgggcgccaa agccggtctg
    20041 gtcgccccgg atgaaaccac tttcaactac gtaaaagggc gtttgcacgc gccgaagggc
    20101 cgcgattttg acgaagccgt cgagtactgg aaaacgctga aaaccgatga cggcgcgacc
    20161 tttgatactg tcgtcaccct gcgagcagaa gagatcgcgc cgcaggtgac ctggggcact
    20221 aatccgggcc aggtgatttc cgtcaccgac atcatccccg atcccgcctc ttttagcgat
    20281 ccggttgagc gcgccagcgc cgaaaaagcg ctggcttata tgggcttaca gccgggcgta
    20341 ccgttaacag acgttgctat tgataaagtc tttatcggct cttgtaccaa ttcgcgtatt
    20401 gaagatttgc gcgcggcggc ggaagtcgcc
//
LOCUS       DAGWFR010000066        19993 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.067, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000066 DAGWFR010000000
VERSION     DAGWFR010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 19993)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19993)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19993
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.067"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..381
                     /locus_tag="MOX77_002435"
     CDS             <1..381
                     /locus_tag="MOX77_002435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HCA3357943.1"
                     /translation="PIACVAALAVLDIFEQENLLQKANTLGKTLRDGLMEIAETHREI
                     GDVRGLGAMIAIELFENGDPGKPNATLTADIVARAREKGLILLSCGPYYNILRILVPL
                     TIEASQIRQGLEIIAQCFDEAKQA"
     gene            511..1911
                     /gene="gabP"
                     /locus_tag="MOX77_002436"
                     /pseudo
     CDS             511..1911
                     /gene="gabP"
                     /locus_tag="MOX77_002436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461719.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GABA permease"
     gene            1953..2630
                     /gene="csiR"
                     /locus_tag="MOX77_002437"
     CDS             1953..2630
                     /gene="csiR"
                     /locus_tag="MOX77_002437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator CsiR"
                     /protein_id="HCA3357944.1"
                     /translation="MTALSQPTAIDGYRWLKNDIIRGTYQPDEKLRMSLLTARYALGV
                     GPLREALSQLVAERLVTVVNQKGYRVASMSEAELLDIFDARANMEAMLVRLAIERGDD
                     AWEAEILARAHMLSKLEASDASEHMLDEWDQRHQAFHSAIVAGCGSHYLLQMRERLFD
                     LAARYRFIWLRETVLSVEMLEDKHIQHHTLTEAILAREAARASELMRQHLLTPIPIIR
                     QAMAGKM"
     gene            complement(2652..3101)
                     /gene="lysM"
                     /locus_tag="MOX77_002438"
                     /pseudo
     CDS             complement(2652..3101)
                     /gene="lysM"
                     /locus_tag="MOX77_002438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461721.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding protein LysM"
     gene            complement(3201..3359)
                     /locus_tag="MOX77_002439"
     CDS             complement(3201..3359)
                     /locus_tag="MOX77_002439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqaE/Pmp3 family membrane protein"
                     /protein_id="HCA3357945.1"
                     /translation="MGFWRIVFTIILPPLGVLLGKGFGWAFILNILLTLLGYIPGLIH
                     AFWVQMRH"
     gene            3542..3841
                     /locus_tag="MOX77_002440"
     CDS             3542..3841
                     /locus_tag="MOX77_002440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HCA3357946.1"
                     /translation="MTELEKLQASAEQAAALLKAMSHPKRLLILCMLCGSPKTSAGEL
                     ARITGLSPSATSQHLARMREEGLIDSQRDAQRIHYFIKNEAVNTLIATLKNLYCP"
     gene            3851..4378
                     /locus_tag="MOX77_002441"
     CDS             3851..4378
                     /locus_tag="MOX77_002441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese family protein"
                     /protein_id="HCA3357947.1"
                     /translation="MSIGIVSPREAQALIAQGAKLIDVRDADEYLREHIPHAQLAPLS
                     RLEQGDLPANLRAEQIIFHCQSGKRTSSNAAKLQAIAAPAQVSLLEGGIDGWKAAGLP
                     VTEDKSQPLPLMRQVQIAAGGLTLLGVILGYTVHGGFFLISGFVGAGLMLAGITGFCG
                     MARLLEKMPWNTRTH"
     gene            4457..4637
                     /locus_tag="MOX77_002442"
                     /pseudo
     CDS             4457..4637
                     /locus_tag="MOX77_002442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000494935.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(4727..5128)
                     /gene="stpA"
                     /locus_tag="MOX77_002443"
     CDS             complement(4727..5128)
                     /gene="stpA"
                     /locus_tag="MOX77_002443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein StpA"
                     /protein_id="HCA3357948.1"
                     /translation="MNLMLQNLNNIRTLRAMAREFSIDVLEEMLEKFRVVTKERREEE
                     ELQQRQLAEKQEKINAFLELMKADGINPEELFAMDSAMPRSAKKRQPRPAKYRFTDFN
                     GEEKTWTGQGRTPKPIAQALAAGKSLDDFLI"
     gene            5827..6276
                     /gene="alaE"
                     /locus_tag="MOX77_002444"
     CDS             5827..6276
                     /gene="alaE"
                     /locus_tag="MOX77_002444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-alanine exporter AlaE"
                     /protein_id="HCA3357949.1"
                     /translation="MFSPQSRLRHAVADTFAMVVHCSVVNMLIEIFLSGMSFEQSLSS
                     RLVAIPVNILIAWPYGVYRDLIMRVARKASPAGWAKNLADVLAYVTFQSPVYIIILLT
                     VGAGWHQIVAAVSSNIVVSMLMGAVYGYFLNYCRRLFKVSSYHQAKA"
     gene            complement(6311..6661)
                     /locus_tag="MOX77_002445"
     CDS             complement(6311..6661)
                     /locus_tag="MOX77_002445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgaC family protein"
                     /protein_id="HCA3357950.1"
                     /translation="MYLRPDEVARVLEKAGFTVDVVTNKTYGYRRGENYVYVNREARM
                     GRTALIIHPRLKDRSSSLADPASDIKTCDHYQNFPLYLGGETHEHYGIPHGFSSRIAL
                     ERYLNGLFGDEKSD"
     gene            6823..7149
                     /locus_tag="MOX77_002446"
     CDS             6823..7149
                     /locus_tag="MOX77_002446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311560.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF883 domain-containing protein"
                     /protein_id="HCA3357951.1"
                     /translation="MLNKPNRNDVDDGVQDIQNDVNRLADSLEDVLKSWGSDAKDEAE
                     AARRKAQALLKETRARMQGRTRVKQAACDAMGCADTFVREKPWCSVGTAAAVGIFIGA
                     LLSLRR"
     gene            complement(7233..8567)
                     /locus_tag="MOX77_002447"
                     /pseudo
     CDS             complement(7233..8567)
                     /locus_tag="MOX77_002447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461729.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
     gene            8656..9087
                     /locus_tag="MOX77_002448"
     CDS             8656..9087
                     /locus_tag="MOX77_002448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HCA3357952.1"
                     /translation="MTTLRQPYYELSPEVYSALVQAKNALEKSTIDPTLMELIYLRVS
                     QINGCAFFLEMHSKALRKAGVNQAKLDALAGWRVSHHFNEQECAALAWAESVTHIAET
                     HAEDNVYLPLLDHFSAREISDLTFAIGLMNCFNRLAIGMRM"
     gene            9359..9604
                     /gene="nrdH"
                     /locus_tag="MOX77_002449"
     CDS             9359..9604
                     /gene="nrdH"
                     /locus_tag="MOX77_002449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin-like protein NrdH"
                     /protein_id="HCA3357953.1"
                     /translation="MSITIYTRNNCVQCHATKRAMESRGFEFEMVNVDLVPDAADTLR
                     AQGFRQLPVVMAGDLSWSGFRPDMINRLPPTPHAANA"
     gene            9601..10011
                     /gene="nrdI"
                     /locus_tag="MOX77_002450"
     CDS             9601..10011
                     /gene="nrdI"
                     /locus_tag="MOX77_002450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class Ib ribonucleoside-diphosphate reductase
                     assembly flavoprotein NrdI"
                     /protein_id="HCA3357954.1"
                     /translation="MSALVYFSSSSENTHRFMQRLGLPATRIPLNERERIQVDEPYIL
                     VVPSYGGGGMAGAVPRQVIRFLNDEHNRARIRGVIASGNRNFGDAWGCAGDVIAQKCG
                     VPWLYRFELMGTQRDIDNVRKGVNEFWQQSPRSA"
     gene            9984..12128
                     /gene="nrdE"
                     /locus_tag="MOX77_002451"
     CDS             9984..12128
                     /gene="nrdE"
                     /locus_tag="MOX77_002451"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1b ribonucleoside-diphosphate reductase
                     subunit alpha"
                     /protein_id="HCA3357955.1"
                     /translation="MATITPERVMQETMDYHALNAMLNLYDKAGHIQFDKDQQAIDAF
                     FAAHVRPHSVKFASQHERLETLVREGYYDDAVLARYDRAFVFRLFEHAHASGFRFQTF
                     LGAWKFYTSYTLKTFDGKRYLEHFEDRVTMVALTLAQGDETLATQLTDEMLSGRFQPA
                     TPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAG
                     APIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKREN
                     ADEKIRIKTLSLGVVIPDITFRLAKENAQMALFSPYDIQRRYGKPFGDIAISERYDEL
                     IADPHVRKTYINARDFFQTLAEIQFESGYLYIMFEDTVNRANPIAGRINMSNLCSEIL
                     QVNSASRYDDNLDYTHIGHDISCNLGSLNIAHVMDSPDIGRTVETAIRGLTAVSDMSH
                     IRSVPSIAAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNFYFYTITWHAVHT
                     SMRLARERGKTFAGFAQSRYASGDYFTQYLQDDWQPKTAKVRALFARSGITLPTREMW
                     LKLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKIEIRKEGKTGRVYYPA
                     PFMTNENLDMYQDAYDIGPEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIY
                     AWRKGIKSLYYIRLRQLALESTEIEGCVSCAL"
     gene            12139..13098
                     /gene="nrdF"
                     /locus_tag="MOX77_002452"
     CDS             12139..13098
                     /gene="nrdF"
                     /locus_tag="MOX77_002452"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1b ribonucleoside-diphosphate reductase
                     subunit beta"
                     /protein_id="HCA3357956.1"
                     /translation="MKLSRISAINWNKIQDDKDLEVWNRLTSNFWLPEKVPLSNDIPA
                     WQTLSAAEQQLTIRVFTGLTLLDTIQNIAGAPSLMADAITPHEEAVLSNISFMEAVHA
                     RSYSSIFSTLCQTKEVDAAYAWSEENPPLQRKAQIILAHYVSDEPLKKKIASVFLESF
                     LFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKHQIALQKLSAIEREEL
                     KLFALDLLMELYDNEICYTEALYAETGWVNDVKAFLCYNANKALMNLGYEALFPPEMA
                     DVNPAILAALSPNADENHDFFSGSGSSYVMGKTVETEDEDWNF"
     gene            13453..14654
                     /gene="proV"
                     /locus_tag="MOX77_002453"
                     /pseudo
     CDS             13453..14654
                     /gene="proV"
                     /locus_tag="MOX77_002453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461735.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine/L-proline ABC transporter
                     ATP-binding protein ProV"
     gene            14647..15711
                     /gene="proW"
                     /locus_tag="MOX77_002454"
     CDS             14647..15711
                     /gene="proW"
                     /locus_tag="MOX77_002454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine/L-proline ABC transporter
                     permease ProW"
                     /protein_id="HCA3357957.1"
                     /translation="MADQTNPWDTAQVADTTTQTADAWGTPAGVATDGGSTDWLNSAP
                     APAPEHFSLLDPFHKTLIPLDSWVTEGIDWVVTHFRPLFQGIRVPVDYILNGFQQLLL
                     GMPAPVAIILFALIAWQVSGVGMGIAALISLIAIGAIGAWSQAMITLALVLTALLFCV
                     VIGLPMGIWLARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGIGNVPGVVVTIIFA
                     LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLAL
                     SMVVIASMIAVGGLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRLTQAVGRDSRSR
                     GNRRWYTTGPVGLITRPFVK"
     gene            15781..16776
                     /gene="proX"
                     /locus_tag="MOX77_002455"
     CDS             15781..16776
                     /gene="proX"
                     /locus_tag="MOX77_002455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine/L-proline ABC transporter
                     substrate-binding protein ProX"
                     /protein_id="HCA3357958.1"
                     /translation="MRHTVIFASAFATLVTASAFAADLPGKGITVQPIQSTISEESFQ
                     TLLVSRALEKLGYTVNKPSEVDYNVGYTSIASGDATFTAVNWQPLHDDMYAAAGGDKK
                     FYREGVFVSGAAQGYLIDKKTAEQYNITNIAQLKDPKIAKIFDTNGDGKADMMGCSPG
                     WGCEAVINHQNKAFDLQKTVEVSHGNYAAMMADTITRFKEGKPVLYYTWTPYWVSDVM
                     KPGKDVVWLQVPFSSLPGEQKNIDTKLPNGANYGFPVNTMHIVANKAWAEKNPAAAKL
                     FAIMKLPLADINAQNAMMHAGKSSEADVQGHVDGWINAHQQQFDGWVKEALAAQK"
     gene            16941..18125
                     /locus_tag="MOX77_002456"
     CDS             16941..18125
                     /locus_tag="MOX77_002456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3357959.1"
                     /translation="MTKPTHGLSPALIVLMSVATGLAVASNYYAQPLLDTIAHHFSLS
                     ASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRTLIVSMTLLAAGGMLITASSQSLSMM
                     ILGTALTGLFSVVAQILVPLAATLATPATRGKVVGTIMSGLLLGILLARTVAGLLANL
                     GGWRTVFWVASALMALMAVALWRGLPKLKSDTHLNYPQLLGSVFSLFIHDKLLRTRAL
                     LGCLTFANFSILWTSMAFLLAAPPFSYSEGMIGLFGLAGAAGALGARPAGGFADKGKS
                     HLTTTFGLLLLLLSWLAIWLGRTSVLALIIGILVLDLTVQGVHITNQTVIYRLHPDAR
                     NRLTAGYMTSYFIGGAAGSLISASAWQHAGWAGVCLAGVTVALLNLLVWWRGFHRQEA
                     VN"
     gene            18622..19152
                     /gene="mprA"
                     /locus_tag="MOX77_002457"
     CDS             18622..19152
                     /gene="mprA"
                     /locus_tag="MOX77_002457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor MprA"
                     /protein_id="HCA3357960.1"
                     /translation="MDSSFTPIEQMLKFRASRHEDFPYQEILLTRLCMHMQGKLLENR
                     NKMLKAQGINETLFMALITLESQENHSIQPSELSCALGSSRTNATRIADELEKRGWIE
                     RRESDNDRRCLHLQLTEKGQAFLQEVLPPQHHCLHQLWSSLSTAEKDQLEHITRKLLT
                     RLDQMEQEGTVLEALR"
     gene            19279..>19993
                     /locus_tag="MOX77_002458"
     CDS             19279..>19993
                     /locus_tag="MOX77_002458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-binding protein"
                     /protein_id="HCA3357961.1"
                     /translation="MSANAEIQPPQQPAKKKGKRKTALLLLTLLFVIIAVAYGIYWFL
                     VLRHIEETDDAYVAGNQVQIMAQVSGSVTKVWADNTDFVKEGDVLVTLDQTDAKQAFE
                     RAKTALASSVRQTHQLMINSKQLQANIDVQKTALAQAQSDLNRRVPLGNANLIGREEL
                     QHARDAVASAQAQLDVAIQQYNANQAMILNSNLEDQPAVQQAATEVRNAWLALERTRI
                     VSPMTGYVSRRAVQPGAQIS"
BASE COUNT         4729 a         5231 c         5145 g         4888 t
ORIGIN      
        1 ccgattgcct gcgtcgccgc gctggcggta ctggacattt tcgagcagga aaatctactg
       61 caaaaggcga atacgcttgg caaaacgctg cgcgatggcc tgatggagat agcggaaacg
      121 caccgtgaga ttggcgacgt gcgcggactg ggcgccatga tcgccattga gttgttcgaa
      181 aatggcgacc ccggcaaacc gaacgcgact ctgaccgccg acattgtggc ccgcgcccgc
      241 gagaaagggt taattctgct ctcctgcggt ccttactaca acatcttgcg catcctcgtt
      301 ccactcacta ttgaggcctc gcagattcgg caaggcctgg agattatcgc ccagtgcttt
      361 gatgaggcga aacaagcgta atgtccaata agcagcgtcg gatggcgacg taactgtctt
      421 atccggccta caaaaaccgt ttcgattgta ggccgaataa gccaggcacc atccggtaaa
      481 cgagcgcaat aacaataaag aggttttagg atggggcaat tgtcagaatc acatgcatta
      541 gggggcgggc tgaaatcacg ccacgtcacc atgttatcga tcgccggcgt catcggcgcc
      601 agcctgtttg tcggttccag cgtggcgatt gcggaggccg gccctgcggt actgctggcc
      661 tatctgttcg caggactttt agtcgtcatg attatgcgaa tgctggctga aatggccgtc
      721 gccacaccgg ataccggttc tttttccacc tatgcggata aagcgatcgg cccctgggcc
      781 gggtatacca tcggctggtt atactggtgg ttttgggtgc tggttattcc gctggaggcc
      841 aatattgccg ccattattct gaattcatgg ataccgggta ttccggtgtg gctattttca
      901 ttagtgatta cgcttgcctt aaccggaagc aatttattga gcgtcaaaaa ttacggtgaa
      961 ttcgaattct ggctggcgct atctaaagta attgccattc tggcgtttat cgcgctgggc
     1021 gcggcggcga ttagcggttt ttatccgtat gccgaggtaa gcggtatttc ccggctctgg
     1081 gatcacggcg gttttatgcc taacggcttc ggtgcggtgt taagcgccat gttgatcacc
     1141 atgttctctt ttatgggcgc ggaaatcgtc actattgctg ccgcggaatc cgatacgccg
     1201 gataaacata tcgtacgcgc caccaattct gttatctggt gaatttccat cttttacctg
     1261 tgttccattt ttgtggtagt ggcgctgatc ccgtggaata tgccgggtct gaaaagcgta
     1321 ggttcgtacc gttcggtact ggagctgctt catattccgc acgcaaaatt cattatggac
     1381 tgcgtgattt tattgtcggt gaccagttgt ctgaactccg cattatatac cgcctcccgg
     1441 atgctctatt cccttagccg ccgcggcgat gcgcctgcga taatgggaaa aactaaccgt
     1501 agcaaaacgc cctgggtggc ggttctcctc tctaccggcg cggccttttt aaccgttatc
     1561 gtcaattatt acgccccggc aaaagtgttt aaatttctta tcgacagttc cggcgccatc
     1621 gcgctgctgg tctatctggt gattgcgatt tcgcaattgc ggatgcgtaa aattctgctg
     1681 gcgcagggcg gagaaattaa gttgaaaatg tggctttatc cgtggctcac ctggctggtt
     1741 atcggcttta tctgctttgt tctggtggtg atgctatttc gaccggcaca gcaactagaa
     1801 gtcatttcaa cggggctgtt agggctgggc ataataggta ctgtccccat tatgtctcgc
     1861 tggaaaaaac tgataaggtg gcaaaaagcc cccctgcaaa acctacgtta gttattcccg
     1921 gcgtcagccg ggaagcttct caggagtaaa agatgaccgc cctttcccaa ccgacggcca
     1981 tagatggcta tcgctggctt aaaaatgaca ttattcgcgg cacttatcag ccggatgaga
     2041 aactgcggat gagtttatta accgcccgct atgcgctcgg cgtagggccg ctgcgtgagg
     2101 cgctgtcaca actggtggcg gaacggctgg tcaccgtggt gaatcaaaaa ggctatcgcg
     2161 tggcatccat gtcagaggcg gaactcctcg atatttttga cgcgcgcgcc aatatggaag
     2221 cgatgctggt gcgcctggcg attgaacgcg gcgatgatgc gtgggaggcg gagatcctgg
     2281 cgcgagcgca tatgctcagt aaactggaag ccagcgatgc cagtgaacat atgctcgatg
     2341 aatgggatca gcgccaccag gcgtttcatt ccgccattgt cgccgggtgc ggctcccact
     2401 atctgctaca gatgcgcgaa cgcttatttg acctggcggc ccgctaccgc tttatttggt
     2461 tacgtgaaac cgttctgtcc gtcgagatgc tggaagataa acatatccag catcacacgc
     2521 taaccgaagc gatactggcg cgcgaggcgg cacgcgccag cgaattaatg cgtcagcatt
     2581 tgctgacgcc gattcccatt attcgccagg cgatggcagg aaaaatgtag ccaggcacgg
     2641 cctgatagcc attattcttc aggaatacgc aacacttgtc ccggatatat tttttccggg
     2701 cttttcagca tcggtttatt tgcctcgaag attttattat acagattggc gttaccatac
     2761 acttgctttg aaatagcgct cagggtgtcg cctgatttta cggtataaaa ctgactttca
     2821 gccgctggcg tcgtggtttt aacctgatcg tcaacgctgc taatcccggc gatattcccc
     2881 acggcaacca gaattttttc ttttgcctcc tgactcagcc catcacccgt cactgtcgct
     2941 tttccatcag caatttgcac attcactttg tcagcgtcgg gtattcccgt tttatttaaa
     3001 tgttcctaga cttttttcgc ctgatcgtcc ttatcatgat tagcggttac cgcgtcccag
     3061 agtttttcac ctgcatcttt tacaaaattg aaaagtccca tattcacctc gcttgtcaaa
     3121 aatacacaca aagaaaagtg tagcagaggg aatgaggtta tcctgataag cggcgcttat
     3181 gcgccgccgg tggccggtaa ttaatgacgc atctgaaccc aaaatgcatg gataagcccc
     3241 ggaatatatc cgagtaatgt cagcaggata ttaaggataa atgcccaacc gaaccctttt
     3301 cctaaaagta cgccgagcgg aggcaaaata atcgtaaata caattctcca gaaacccata
     3361 tacactccat acaagcaaaa ttagtcattg tttaaaaaga gattttatct ctaagcatag
     3421 tcagtttacc tgagcctgcc agtcgcgcgc cgcgctttta ccctccttta cgctttttac
     3481 gctggcatca ggttgacgtt tattttagaa ttaactaaat ttagaaaaca cttaaataac
     3541 tatgacagag cttgaaaaac ttcaggccag cgcagaacag gcagcggccc tgctcaaagc
     3601 gatgagccac ccaaaaagat tactgatttt atgtatgctt tgcggttcac caaaaaccag
     3661 cgcaggcgaa ctggcgcgca ttaccgggct aagcccctcc gcgacgtcgc agcatctggc
     3721 gcggatgcgg gaagaagggc tgattgatag tcaacgcgat gcccagcgca ttcactattt
     3781 cattaaaaat gaggcggtta atacgcttat cgccacgtta aagaatctct attgtccata
     3841 aggaggcacg atgtccattg ggatagtttc cccccgtgag gcgcaagcgc tgatagcgca
     3901 aggcgcgaaa ctgattgatg tgcgcgacgc cgatgaatat ctgcgcgagc atattccaca
     3961 tgcgcaactg gcgccgcttt cccggcttga acagggcgat ttgcccgcca acctgcgagc
     4021 ggaacagatt atttttcact gtcagtcagg taaacgaacc agcagcaatg cagcaaaact
     4081 acaggccatt gccgcccctg ctcaagtcag tttactggaa ggcggtatcg acggatggaa
     4141 agcggcagga ttgcccgtca cagaagacaa atcgcaaccg ttgccgctga tgcgtcaggt
     4201 gcaaatcgcc gccggcgggt tgacgttgct tggggtgatt ctgggctata cggtccacgg
     4261 cggctttttc ctcattagcg gttttgtcgg ggccgggtta atgctggcag gcataaccgg
     4321 cttctgcgga atggcgcgac tactggaaaa aatgccctgg aatacccgta ctcattaagc
     4381 ggtactttca ccgcgcgtcg gtaagtgtgt agtagactga aggcgggttt ataccattgt
     4441 tcaacgggag gacgtgatgt tcacaccagg cgatatcgta cagccccgaa tggggggggc
     4501 cgaaactgaa agtgattgaa gtcaacgagg atcatattgt cgcggtacag gtcggtaatg
     4561 agccgggcga aaaattgatc ctcaaagcgg cagatgtcac cccctattgc gaaaagggcg
     4621 attttggcgt gtgctgattt atcaaaatga gcatggcgca acgttccctg aatcccggtt
     4681 aatagagaca ggaaacgcag cgccatctgt taaaggttat ccgtgattag attaagaaat
     4741 catccagaga tttccccgcc gccagcgcct gggcaatcgg tttaggcgta cgaccttgtc
     4801 cggtccaggt tttttcttcg ccattgaaat cagtaaaacg atattttgcc ggacgcggtt
     4861 ggcgcttttt agcagaacgc ggcattgctg aatccatggc aaataactct tccgggttaa
     4921 taccgtctgc tttcatcagc tccagaaagg cattaatttt ctcctgcttc tcggcaagct
     4981 ggcgttgctg caattcttct tcttcgcgtc tttctttagt gacaaccctg aatttttcga
     5041 gcatttcttc aagaacatca atggagaatt cgcgagccat agcgcgcagc gtgcggatat
     5101 tatttaagtt ctgtaacatc aaattcatat caataaaaac cttttaacgc agaaaacaaa
     5161 aactattaca ggcggtattg tatgcgatta ttgattatat ttccagatcc taaagttcat
     5221 acagatatac acagcataac tcgattaatt atattaatct gttaaccaga agattatatt
     5281 cattaccccc tgtgtgtttc aggttattct gcctacggta tatctgtagg tttcccgttc
     5341 ggctgtttat agcgtattgc gtatctcagt aaccgcggtg accctcacgg tggctgacct
     5401 tatacagaag tgaatatttc agcacaataa tagattaatc attcaaaaat tatcatcaga
     5461 gctttatgct aaaaatcacc ctgtaatagc tataattatg ctgagaaaag cagagcgcgt
     5521 gccgttagcc gagaatacat cgcatctgac aacatttgga atgtggctga aaatcgccag
     5581 aaaaacaatg cattataatg tattgattta aaagtaatta atgactaaca acaacgaaaa
     5641 tctcgccgcg agcaaaaaaa cacacaatca cagagtattt tatcgacaaa aagcctataa
     5701 ataaaaatat tacgctagtt gatagttatt atatagggat atactctatg aaaagacaaa
     5761 agcgctttat aatttcacta ccaactatca cctcattctg atcgatacgc tacaaggagc
     5821 attaacatgt tctctccaca gtcacgcttg cgtcatgccg tagcagacac gtttgcgatg
     5881 gttgttcact gttctgttgt gaacatgttg atcgagatat tcctctccgg aatgagcttt
     5941 gagcagtcgc tttcttccag gctggtggcg atacctgtca acattttgat tgcatggcca
     6001 tacggcgttt accgcgatct gattatgcgc gtcgcgcgta aggcaagccc ggcgggatgg
     6061 gccaaaaacc tggcggatgt attggcttat gtcacctttc agtcacccgt ttatattatc
     6121 atcttgctga ccgtcggcgc cggctggcat cagatagtgg ccgccgtgag ttcaaacatt
     6181 gttgtttcaa tgttaatggg cgcggtttat ggctacttcc tgaattattg tcgtcgcctg
     6241 tttaaagtga gcagctatca tcaggctaag gcataagtta acgtcgcgac tggctttgcc
     6301 agtcgcgctt ttagtcgctt ttttcgtcgc caaaaagccc attcagataa cgttctaacg
     6361 ctattcggga gctaaagccg tggggaatac cgtaatgttc gtgggtctcg ccgcctaaat
     6421 agagcggaaa attttggtag tgatcgcagg ttttaatatc cgaagccggg tcagccagtg
     6481 atgagctacg gtcttttaat ctggggtgaa tgatcagcgc ggtacgcccc atacgcgcct
     6541 cgcggttaac ataaacataa ttctcgccgc gtcgataacc atacgtctta ttcgtcacca
     6601 catcgacggt aaaccctgcc ttttccagta cccgcgccac ctcgtcaggt cgtaaataca
     6661 tgttttatcc tcattctctt ttactgcggg cttaccttac ccgatagcgc gttatcaacg
     6721 ctttcagaaa agtccagaaa cgcatgatat cgccgtaaca agcctcagca ggtaaaaata
     6781 tgaactacac tgaaagctac atcgaaatca atggaggatc atatgcttaa caaaccgaac
     6841 cgaaacgacg tcgatgatgg tgttcaggat attcagaatg atgtcaatcg attagccgac
     6901 agtctggaag atgtccttaa atcctgggga agcgatgcga aagacgaagc cgaggctgcg
     6961 cgacgtaaag cacaggcgtt gctgaaagag acccgggcgc ggatgcaggg tcgtactcgc
     7021 gtaaaacaag ccgcctgtga tgcgatgggg tgcgcggata cgtttgtgcg tgaaaaaccc
     7081 tggtgtagcg taggaaccgc cgcagcggtg gggattttta tcggggcgct gcttagcctg
     7141 cgtcgctaac gacgtgcgct gccggatggc gacatacttt atggggcctg catcattgcc
     7201 gcaggcccag gtcgcgccat tcggcgaaac ggttactgta tcgcctgtcg aagctgacat
     7261 gctacctgtt tcgccatgcc agcggaagta atattggtaa acgacagtaa aatgcccccc
     7321 tttcctgacg aaaccactcg ccaacgactt agcgcctgta ccgccagtcc ggcctgattc
     7381 gcttttgcta ccagcgcttt atcatcacct tcaacctcaa taaccaattg aataccgcct
     7441 ttctgtaatg tcacgacaaa tccctgttct gccagcgcct cttcaatcca taaccgtcgc
     7501 tgagcataat gttgacgcat ctttttcaga tgccgccaga aatggccatc acggataaaa
     7561 tcagccagcg tgtgctgcca taacaacggt acgctacagg gcatcagcga cgcctgctgg
     7621 cggaaatgct caatctgctt tatcggcacc accagccagg cggtacgtaa tgccggaaag
     7681 agcgacttac tgaacgttcc ggcgtaaatc actcgctgcg gggcatccag actcttgagc
     7741 ggcggaagcg gtttaccgtg ataacgaaat tcgctgtcgt agtcatcttc aataatccag
     7801 gcctgcacat tcgccgccca tgccagaagt tgccgtcggc gagttaacga cagcgccacc
     7861 cccaacggac tttgatgggc gggcgtcacc aatgcaaagc gtccctgcgg gcaatcccgc
     7921 atccccgctg cgacattcag cccatcggca tcgaccggaa tcggcgccag cgtaatcccc
     7981 tcctgcgtta tcaccgggcg aattaacgga aagccgggat cttccaccca catgctgtct
     8041 cccggcacag acaatgtacg caggattagc cgcatagaat ccgcatatcc ggaggtaata
     8101 aatacctgtt ccggcagaca ttcaatgcta cgcgaaaccc gcaggtaatc gactatcgcc
     8161 tagcgcaaaa tcgcctcgcc gcagacgtcg cctaatgcca gatcgaagcg tgtctgcgtg
     8221 cgcaaccgac gccccattac tcgcgcccac ttctcgcgtg gaaagagatc cagcgccggt
     8281 aaccccatct gaaagggttt cggttccgga ctttctccgg caaaaacagc gggtatcggc
     8341 ggcgccgtct caaaccgtag agcgttgctc acaaacgtgc ctgcctggcc acgtcgctcc
     8401 agccagccct gcgctaccag ctcgccatag gcattttcca ccgtggcgcg agaaacgccc
     8461 agttcctgcg cccacgtccg actggaaggc aaacgcgttc cgggcgcgag ttctccttgc
     8521 tcaatggccg tttttaactg acgagcgatg tactgatagc gcggcatatg gtctgctttt
     8581 tctgtaaaaa tatggctctc ttttacagac cattatagtg ctacagtgct cgtcatcaac
     8641 acgaggagaa acataatgac gacgttacgc caaccctatt atgaactgag cccggaggtt
     8701 tacagcgctc tggtgcaggc gaaaaacgcg ctggaaaaga gcacgattga ccccactctg
     8761 atggagctga tttacctgcg tgtttcgcaa ataaatggtt gtgcattttt cctggagatg
     8821 cacagtaaag cgctgcgtaa ggctggcgtg aatcaagcta aattagatgc gctggcagga
     8881 tggcgggtaa gccaccattt caacgagcaa gagtgcgcgg cgttagcctg ggcggaatcg
     8941 gtgacgcaca ttgctgaaac ccacgccgaa gataatgttt acctgccgct gctcgatcat
     9001 ttcagcgcgc gtgaaatcag cgatctgacc ttcgctattg gtttaatgaa ctgctttaac
     9061 cgtctggcga tcggtatgcg aatgtgacgc attgttgccg gatagcgctg atgtcagcca
     9121 actctgttat gcgtgaacct gcaggccgga tcgggcgttc acgccgccat ccggcaaaaa
     9181 ttagccatgc cgcccctacc ccgctgcgtt catcagcggc gttaaaatca atcgaaaatt
     9241 cccatatctt gtatggttga atcttaattc aactacatct agtatttcgt gtatcaacac
     9301 acgacaatcc gacgcgtttc atcgcgccgt tttctcattt taaatggaaa tacgaatcat
     9361 gagcattact atttacactc gcaataactg tgttcagtgc cacgccacaa agcgggcgat
     9421 ggaaagccgt ggatttgaat ttgagatggt gaacgtcgat ctggtgccgg atgcagcgga
     9481 tacgctccgg gcgcaagggt ttcgtcaatt accggtggtg atggcgggcg atttgagctg
     9541 gtctggcttc cgtccggaca tgattaaccg tctgcccccg acgccccacg cggcaaacgc
     9601 atgagcgcgc tcgtctactt ctccagcagc tctgaaaata cgcaccgttt tatgcagcgt
     9661 ctggggctgc ccgccacgcg tattccgctc aatgaacggg agcgaattca ggtagacgaa
     9721 ccgtacattc tggttgtgcc gtcatacggc ggcggcggga tggccggtgc ggtgccgcga
     9781 caggtgatcc gctttttaaa tgatgaacac aaccgggcgc gcattcgcgg cgtcatcgcc
     9841 tccggtaacc gcaatttcgg cgatgcctgg ggatgcgctg gcgatgtgat agcacaaaaa
     9901 tgcggcgtcc cctggctgta ccgctttgag ctcatgggca cacaacgcga catcgataac
     9961 gtccgaaaag gagtaaatga attttggcaa caatcacccc ggagcgcgta atgcaggaaa
    10021 ccatggatta ccacgccctg aacgcgatgc tgaatcttta cgataaagca ggccatattc
    10081 agttcgacaa ggaccagcag gcgatcgacg ccttctttgc cgcccacgtc cgcccgcatt
    10141 ccgtgaagtt tgccagccag catgaacgtc tggagacgct ggttcgggaa gggtattacg
    10201 atgacgccgt cctcgcgcgt tacgaccgcg ccttcgtctt ccgcctgttc gagcacgccc
    10261 acgccagcgg ctttcgcttc cagacgtttc ttggcgcctg gaagttctat accagttaca
    10321 cgctgaaaac cttcgacggc aaacgttatc tggaacactt tgaagatcgg gtgacaatgg
    10381 tggcgttgac gctggcgcag ggtgacgaaa cgctggccac ccaactgacc gatgaaatgc
    10441 tttctggtcg ctttcagccc gctaccccga cttttttaaa ttgcggtaaa cagcagcgtg
    10501 gggaactggt ctcctgcttc ctgctccgta tcgaagacaa tatggaatcg atcgggcgag
    10561 cggtgaattc ggcgctgcaa ctctccaaac gcggcggcgg cgtcgcattt ttactctcca
    10621 atctgcgcga ggcgggcgcg ccgatcaaac gcattgagaa tcagtcttcc ggcgtgatcc
    10681 cggtgatgaa aatgctggaa gacgcgtttt cgtatgccaa ccagcttggc gcgcgccaag
    10741 gggccggcgc ggtttatctc catgcgcacc atccggatat tctgcgtttt ctggatacca
    10801 aacgggaaaa tgccgacgaa aaaatccgga tcaaaacgct ctctctcggc gtggtgatcc
    10861 cggacatcac cttccggctg gcgaaagaaa acgcgcaaat ggcgctcttt tcgccctatg
    10921 acatacaacg acgctacggc aaaccgtttg gcgatatcgc cattagcgaa cggtacgatg
    10981 aattaattgc cgatccgcac gtgcgcaaaa cctatattaa cgcccgtgac ttttttcaaa
    11041 cactggcgga aattcagttc gaatccgggt atctctacat catgtttgaa gatacggtaa
    11101 accgcgcgaa tcctattgct ggtcgcatta atatgagcaa cctgtgctcg gaaattttac
    11161 aggtcaatag cgcctctcgt tacgacgata accttgacta tacccacatc gggcatgaca
    11221 tctcctgcaa tctcggctcg ctgaatatcg ctcacgtcat ggattcaccg gacattggcc
    11281 gtaccgtaga aaccgctatt cgcggcctga cggcggtgtc ggacatgagc catatacgca
    11341 gcgtgccctc aatagccgcc ggtaatgccg cctctcatgc catcggtctg ggccagatga
    11401 atctgcatgg ctatctggcg agggaaggta ttgcctacgg ttcgccggag gcgttggatt
    11461 tcaccaattt ctatttttac accattacct ggcatgccgt gcatacttca atgcggctgg
    11521 cccgcgaacg cggcaaaacc ttcgccggat ttgcgcagtc gcgctatgcc agcggcgact
    11581 attttacgca gtatttacag gacgactggc aaccgaaaac ggcgaaagtc agggcgctat
    11641 ttgcccgcag cggcattacg ctgcccacac gcgaaatgtg gctaaagctg cgcgacgatg
    11701 tgatgcgcta tggcatctat aaccaaaatt tgcaggcggt gccgccgacc ggttcgattt
    11761 cttacattaa tcatgcgacc tccagcattc atccgattgt ggccaaaatt gagattcgca
    11821 aagagggcaa aaccgggcgt gtgtattacc ccgcgccgtt tatgactaat gaaaacctgg
    11881 acatgtatca ggatgcttac gatatcggtc cggaaaaaat tattgatacc tatgccgagg
    11941 ccacgcgcca cgtcgatcaa ggactgtcgc tcaccctgtt tttccccgat accgccacga
    12001 cccgcgatat caacaaagcg cagatctatg cctggcgaaa aggtattaag tcactgtatt
    12061 acatccgact tcgccagttg gcgctggaaa gtactgaaat tgaaggctgc gtatcctgcg
    12121 cgctataagg aaagccatat gaaattatct cgtattagcg ccatcaactg gaacaagatc
    12181 caggacgaca aagatctgga ggtgtggaac cggctgacca gtaacttctg gctgccggaa
    12241 aaagtgccgt tatcgaatga tattccggcc tggcagacgc tgagcgccgc cgaacagcag
    12301 ctcaccattc gcgtgtttac gggtcttacg ctgctcgaca ctatccagaa catcgcaggc
    12361 gcgccgtcgt taatggcaga tgccatcacg ccgcatgaag aggccgtact gtcgaacatc
    12421 agctttatgg aagcggtaca cgcccgctct tacagttcta ttttctccac gctgtgccag
    12481 acgaaagagg ttgatgccgc ctacgcctgg agcgaagaaa acccaccgct tcagcgtaag
    12541 gcgcagatta ttttagctca ttacgtcagc gatgaaccgc taaagaaaaa gattgccagc
    12601 gtctttttag agtcttttct gttctattcc ggcttctggt tgccgatgta tttctccagc
    12661 cgcggtaagc tcacgaacac tgccgacctg attcgtttaa tcattcgcga tgaagcggtt
    12721 cacggttatt atattggcta taagcatcag atagcgctac aaaaactatc ggcaatcgag
    12781 cgtgaagagt taaagctttt cgcgctggat ttattgatgg aactgtacga caacgaaatc
    12841 tgctacacag aagcgttata tgcggaaacc ggctgggtta acgacgtcaa agccttcttg
    12901 tgctacaacg ccaataaagc cttaatgaac ctgggttatg aggcgttatt tccgccggag
    12961 atggcagacg tgaatcccgc aatccttgcc gcgctctcgc cgaatgccga cgaaaaccat
    13021 gatttctttt ccggctcagg ttcatcttat gtgatgggga aaacggtcga aaccgaagac
    13081 gaagactgga atttttaacc ttgcgggcat gggaaataac gttacatttt ccatgccttt
    13141 atttcaagca ataccgggtt aaatcgcgca aatattacaa catgtcctac actcaatacg
    13201 agtgacatta ttcacctgga ttcctccaat tcaggtggat ttttgctggt tgtctcaaaa
    13261 aatatctctc cctccccatt cgcgttcagc ccttatatca tgggaaatca cagccgatag
    13321 cacctcgcaa tattcatgcc agaagcaaat tcagggttgt ctcagattct gagtatgtta
    13381 gggtagaaaa aggtaactat ttctatcagg taacatatcg acataagtaa ataacaggaa
    13441 tcattctatt gcatggcaat taaattagaa gtgaagaatc tgtataaaat atttggagag
    13501 catccgcagc gtgccttcaa atatattgaa aagggactat cgaaagagca aatactggaa
    13561 aaaacggggc tatcgcttgg cgttaaagac gccagtctgg ccattgaaga aggcgagata
    13621 tttgtcatca tgggattatc cggctcgggt aaatccacaa tggtacgcct tctcaatcgc
    13681 ctgattgaac ccacccgcgg gcaggtactg attgacggtg ttgatattgc caaaatatca
    13741 gacgctgagc ttcgcgaggt gcgcaggaaa aagattgcga tggtcttcca gtcatttgcg
    13801 ctcatgccgc atatgaccgt gctggataat acggcattcg gtatggaatt agcgggcatc
    13861 gcggcgcaag agcgtcgcga aaagcgctgg acgccttgcg tcaggtgggg cttgagaatt
    13921 acgctcacgc ctatccggat gaactttccg gtgggatgcg tcagcgtgtt gggcttgccc
    13981 gcgcgctggc aatcaaccct gatatcttat taatggatga agcgttttcc gccctcgatc
    14041 cattaattcg taccgaaatg caggatgagc tggtgaaatt acaggcgaaa catcagcgca
    14101 ccattgtctt tatttcccac gatcttgatg aggctatgcg tattggcgac aggattgcca
    14161 ttatgcaaaa tggcgaggtc gtacaggttg gtacgccgga tgagatcctg aataatccgg
    14221 caaatgatta tgtccgcacg ttcttccgtg gcgtggatat tagtcaggtc tttagcgcca
    14281 aagatattgc ccgtcgcagt ccggtcggct taattcgtaa aacgccaggt tttggtcccc
    14341 gttcggcact gaaattatta caggatgaag accgtgaata tggttacgtc attgagcgtg
    14401 gcaataaatt cgtgggcgtc gtgtccatcg actcattaaa agcggcatta agccaggcgc
    14461 aagggattga agcggcgctt atcgacgacc ctttagtcgt tgatgcgcaa accccactca
    14521 gcgagttgct ctctcacgtc ggccaggcgc cctgcgcggt gccggttgtc gatgaagaac
    14581 accagtatgt tggcattatt tcaaaacgta tgttgctaca ggctttagat cgcgaggggg
    14641 gtaacaatgg ctgatcaaac gaatccgtgg gataccgcac aggtggccga tacgacgacg
    14701 caaacggctg atgcctgggg aacaccggca ggcgtagcca cggacggcgg cagtaccgac
    14761 tggttgaaca gcgcgcccgc gccagcccct gaacactttt ctcttctgga cccgttccat
    14821 aagacgctta tcccgctgga tagctgggtc acagagggaa tcgactgggt cgtcacccat
    14881 ttccgtcccc tttttcaggg gattcgtgtg ccggtggatt acatccttaa cggctttcag
    14941 caactgctgc tgggaatgcc cgcccctgtg gcgattattc tctttgcgct gattgcctgg
    15001 caggtttccg gtgtgggcat ggggatcgcg gcgctgatat cgctgatcgc catcggcgcg
    15061 atcggcgcct ggtcgcaggc gatgattacc ctggcgctgg tgctgaccgc cctgttgttc
    15121 tgcgtcgtga tcggattacc gatgggaatc tggctggcgc gcagcccgcg cgcggccaaa
    15181 atagttcgtc cgctgctgga tgcgatgcag accacgcccg cgtttgtcta tctggtgccg
    15241 attgtcatgt tattcggcat cggtaacgtg ccgggcgtgg tggtgacgat tatttttgct
    15301 ctaccgccga ttatacgcct gacgatcctg ggcattaacc aggtgcctgc cgacttaatt
    15361 gaagcgtcgc gctcgttcgg cgccagcccg cgccaaatgt tgttcaaagt gcaactaccg
    15421 ctggcgatgc ccaccattat ggcaggcgtt aatcagacgc tgatgctggc tctctcaatg
    15481 gtcgtcatcg cctcgatgat tgcggtcggt gggcttggcc agatggtact acgcggcatt
    15541 ggtcgtcttg atatggggct ggcaaccgtc ggcggcgtcg gcattgtgat tctcgccatc
    15601 attctggacc gtctgacgca ggccgtcggg cgcgactcgc gtagccgcgg taaccgtcgc
    15661 tggtatacca ccggtcctgt tgggctaatc acccgccctt tcgttaagta actctcctga
    15721 cgcccggtga cattgcgctt accgggctta caactcccta ccataattaa aggaacaacg
    15781 atgcgacata ctgtgatatt tgcctcagcg tttgccaccc ttgtcaccgc cagcgctttc
    15841 gctgccgacc tgcctggcaa aggcattacc gtccaaccta tccaaagcac gatttctgaa
    15901 gagtccttcc agacgttact ggtcagccgg gcgctggaaa agttgggtta taccgtaaat
    15961 aagccgagtg aagtcgatta caacgtaggc tatacctcca tcgcctctgg cgatgcgacg
    16021 tttaccgccg tgaactggca gccgctgcat gatgatatgt atgccgcagc aggcggagac
    16081 aaaaagtttt accgcgaggg cgtcttcgtc tccggcgctg cgcagggcta tctgatcgat
    16141 aaaaaaaccg ccgagcagta caacatcact aatatcgctc aactaaaaga tccgaaaatc
    16201 gccaaaatct tcgataccaa tggcgacgga aaagcggaca tgatgggctg ctcgccgggc
    16261 tggggctgcg aagccgtaat caatcaccag aataaagcgt ttgatctgca aaaaaccgtt
    16321 gaggtcagcc acggtaacta tgcggcgatg atggctgata ccattacccg ttttaaagaa
    16381 ggcaagccgg tgctgtatta cacctggacc ccgtactggg tgagcgacgt aatgaagccg
    16441 ggtaaagatg tcgtctggct acaggtgccg ttctcctccc tgccgggcga acagaaaaat
    16501 attgatacta aactgccgaa cggcgcgaac tatgggttcc cggtcaatac tatgcatatt
    16561 gtcgccaata aggcatgggc ggagaaaaat ccggcggcgg cgaaactgtt cgccatcatg
    16621 aagctgccgc tggcggatat caacgcgcag aacgccatga tgcatgccgg taaatcgtct
    16681 gaagccgatg ttcagggcca cgtagacggc tggatcaacg cccaccagca gcagtttgac
    16741 ggctgggtga aagaagcgct ggccgcgcag aaataatatc gttttttatg ccggataagg
    16801 cgcagttcat gcgccgctat ccggccaacg caatctctcc tcaaagcgca cgattcatca
    16861 cgtcactgtt cccctttatt catcaacatc cgctatgatt gttttcccag gaaataatta
    16921 tctaaatcac gattaccata atgacgaaac ccactcatgg gcttagcccg gcgctgatcg
    16981 ttttaatgtc tgtggccacg ggtctggcgg tcgccagcaa ctactatgcc cagccgctgc
    17041 ttgataccat cgcgcatcac ttttcgcttt ccgccagctc cgcagggttt atcgttaccg
    17101 ccgcgcagtt gggctatgcc gctggcctgt tgtttctggt gccgctcggc gacatgtttg
    17161 aacgccgaac gctgattgtc tccatgacgt tgctggcggc tggcggaatg ctgatcactg
    17221 ccagcagtca gtcgcttagc atgatgatac tcggaacggc cttaaccgga ctgttctccg
    17281 tggtggcgca gattctggtt ccgctggccg ccacgcttgc gacgcccgcc acccgcggta
    17341 aagtggtcgg caccattatg agcggcctgt tgctggggat cctgctggcg cgaacggtcg
    17401 ccggactgct ggcaaacctc ggcggttggc gcaccgtatt ttgggtagcg tcggcgctga
    17461 tggcgctgat ggccgtcgcg ttgtggcgcg gactgccaaa gctcaaatcc gacacccatc
    17521 ttaactaccc gcaactgttg ggttctgtat tcagcctgtt tattcacgat aagctgctgc
    17581 gtacccgcgc gctgctgggc tgtctgacct ttgctaattt cagcatcctc tggacgtcaa
    17641 tggccttttt gctcgccgcg ccgccgttta gctattccga ggggatgatt ggcctgtttg
    17701 gcctggcggg ggccgccggc gctttaggcg cgcgtccggc tggcggattt gccgataaag
    17761 gtaaatctca cctcaccacc acgttcggct tactgctgct gttactctcc tggctggcta
    17821 tctggcttgg gcgcacctcg gtactggcgc tgattattgg tattctggta ctggacctca
    17881 ccgttcaggg ggtacatatc accaatcaga cggtcatcta tcgtttgcat ccggatgcgc
    17941 gtaaccggct caccgccggc tatatgacca gctactttat cggtggcgcc gcggggtcgc
    18001 tgatttccgc ctccgcctgg caacatgccg gctgggccgg cgtttgtctg gcgggtgtca
    18061 cggtagcctt acttaattta ctggtctggt ggcgaggttt tcaccgacag gaagccgtaa
    18121 attaagcgga tagtgagcgt ttacctttgt ttaagctcct tagggtgtta aggagctccc
    18181 cagtctgtta aggttatgct attcatttat catggttatt tttataccgg tgaagaataa
    18241 tataattcta tggaaagccc tgcatcccca tctgctccca ggccaatagc gcccgttcaa
    18301 ggattcgaag gtcgttcacc gatagctatt cgtgatattc cggtggcttt tgcatcgggt
    18361 tgtaaggccg tttacccggc tttcgcccct cccgcttatc gttctctcct gattttttca
    18421 tgcaggcact cacgcttttc tcgtcattcc tggatttgcc gcaggcggcg ctttaccggg
    18481 cccaatgttc ccgctgacgt ctcagtctgc gtatcattgg ttgctttata gcctgaaaga
    18541 atgattttgt attaataata catttacttt atttgtcact gtcgttacta tatcggctga
    18601 aattaatgag gtcatgccca aatggatagt tcgtttacgc ccattgaaca aatgctaaaa
    18661 tttcgcgcca gccgtcacga agactttcct taccaggaaa ttcttttgac tcgtctttgt
    18721 atgcacatgc aaggcaagct cctggaaaac cgcaataaaa tgctgaaggc tcaagggatt
    18781 aacgagacgt tgtttatggc gttgattacg ctggagtctc aggaaaacca cagtattcag
    18841 ccgtctgaat taagctgcgc gctgggttca tctcgcacca atgcgacacg cattgcagat
    18901 gagctggaaa aacgcggctg gattgagcgt cgtgagagcg ataacgaccg ccgttgcctg
    18961 catctgcaat taacggagaa aggccaggca tttttgcaag aagtgcttcc gcctcagcat
    19021 cattgtctgc atcaactctg gtcatcactt agcacagccg aaaaagatca acttgagcac
    19081 atcactcgta aactcctgac gcgtcttgat caaatggagc aggaaggcac tgttcttgag
    19141 gcgctgcgct aaagcgccga cccgctcaaa aatccagatt aataacagga aagcggacag
    19201 gccggcacgc gttactgctg gcctttctga caacaggtcg gctcagccga tgtgaataat
    19261 aagatcgtgg agaacaacat gagcgcaaat gcggagatcc aacccccgca gcaaccggct
    19321 aagaagaaag gcaaacgcaa aacagcgctg ctacttctta ccttgctctt tgttattatt
    19381 gccgtggcat atggaattta ttggttttta gtattgcgtc atattgaaga gacagatgat
    19441 gcttacgtgg cagggaacca ggttcaaatc atggcgcagg tgtcaggcag cgtgacgaaa
    19501 gtctgggctg ataacaccga ctttgtaaaa gagggcgatg ttctggtcac gctcgatcag
    19561 actgacgcca aacaagcgtt tgaaagagcc aaaacggcgc tggcctccag cgtgcgccag
    19621 acgcaccagt tgatgattaa cagtaagcag ttgcaggcga atatcgacgt gcaaaaaacc
    19681 gccctggcgc aagcgcagag cgaccttaac cgtcgtgtgc cgctgggtaa tgccaatctt
    19741 attggccggg aagagctgca acacgcccgc gatgccgtcg ccagcgcgca ggcacagctt
    19801 gatgtcgcca ttcaacagta caatgccaac caggcaatga tacttaacag taatctggaa
    19861 gatcagcctg cggttcaaca agcggcgacc gaagtgcgta acgcctggct ggcgctggag
    19921 cgtactcgca tcgtcagtcc aatgaccggt tatgtctccc gccgcgccgt ccagcctggc
    19981 gcgcagatca gcc
//
LOCUS       DAGWFR010000067        19560 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.068, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000067 DAGWFR010000000
VERSION     DAGWFR010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 19560)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19560)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19560
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.068"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..331)
                     /locus_tag="MOX77_002459"
     CDS             complement(<1..331)
                     /locus_tag="MOX77_002459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB family transcriptional regulator"
                     /protein_id="HCA3357962.1"
                     /translation="MPILQWFLLFLLSLLISLIFLYLHLPAAMLLGPMIAGIVLSLRG
                     STLQLPRGIFLAAQAILGCMIAQNLTGSILTTLALYWPVVLFVLLVTLLSSAVVGWLL
                     VRYSSLPG"
     gene            complement(468..1751)
                     /locus_tag="MOX77_002460"
     CDS             complement(468..1751)
                     /locus_tag="MOX77_002460"
                     /EC_number="2.3.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HCA3357963.1"
                     /translation="MADTKAKITLTGDTAIELDVLKGTLGQDVIDIRSLGSKGVFTFD
                     PGFTSTASCESKITFIDGDEGILLHRGFPIDQLATDSNYLEVCYILLYGEKPTQEEYD
                     EFRTTVTRHTMIHEQITRLFHAFRRDSHPMAVMCGITGALAAFYHDSLDVNNPRHREI
                     AAFRLLSKMPTMAAMCYKYSIGQPFVYPRNDLSYAGNFLNMMFSTPCETYEVNPVLER
                     AMDRILILHADHEQNASTSTVRTAGSSGANPFACIAAGIASLWGPAHGGANEAALKML
                     EEISSVKHIPEFVRRAKDKNDSFRLMGFGHRVYKNYDPRATVMRETCHEVLKELGTKD
                     DLLEVAMGLEHIALNDPYFIEKKLYPNVDFYSGIILKAMGIPSSMFTVIFAMARTVGW
                     IAHWNEMHTDGMKIARPRQLYTGYDKRDFKSALKR"
     gene            1852..2097
                     /locus_tag="MOX77_002461"
     CDS             1852..2097
                     /locus_tag="MOX77_002461"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357964.1"
                     /translation="MHQSTVTSLLFGSPLCERGDDLGTEQWAFAGNGLINFELAANQE
                     RSNPSNVTCLSLITVLKEWVNIIVLLHNLLTGERVTP"
     gene            2491..2895
                     /gene="sdhC"
                     /locus_tag="MOX77_002462"
                     /gene_synonym="cybA"
                     /gene_synonym="dhsC"
     CDS             2491..2895
                     /gene="sdhC"
                     /locus_tag="MOX77_002462"
                     /gene_synonym="cybA"
                     /gene_synonym="dhsC"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000263334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase cytochrome b556 subunit"
                     /protein_id="HCA3357965.1"
                     /translation="MWALFMIRNVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFI
                     AVGILLWLLGTSLSSPEGFQQAADIMDGFIVKFIMWGILTALAYHVIVGIRHMLMDFG
                     YLEETFEAGQRSAKISFVITVVLSLLAGVLVW"
     gene            2889..3236
                     /gene="sdhD"
                     /locus_tag="MOX77_002463"
                     /gene_synonym="cybS"
                     /gene_synonym="dhsD"
     CDS             2889..3236
                     /gene="sdhD"
                     /locus_tag="MOX77_002463"
                     /gene_synonym="cybS"
                     /gene_synonym="dhsD"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017455938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase membrane anchor subunit"
                     /protein_id="HCA3357966.1"
                     /translation="MVSNASALGRNGVHDFILVRATAIVLTLYIIYMVGFFATSGELT
                     FEAWTGFFSSAFTKVFTLLALFSILIHAWIGMWQVLTDYVKPLAVRLILQLVIVVALV
                     VYVIYGFVVVWGV"
     gene            3236..5002
                     /gene="sdhA"
                     /locus_tag="MOX77_002464"
     CDS             3236..5002
                     /gene="sdhA"
                     /locus_tag="MOX77_002464"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005122549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase flavoprotein subunit"
                     /protein_id="HCA3357967.1"
                     /translation="MKLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRS
                     HTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHM
                     GLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTI
                     FSEWYALDLVKNQDGAVVGCTALCIETCEVVYFKARATVLATGGAGRIYQSTTNAHIN
                     TGDGVGMALRAGVPVQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMECY
                     APNAKDLAGRDVVARSIMIEIREGRGCDGPWGPHAKLKLDHLGKEVLESRLPGILELS
                     RTFAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQALTVNEQGEDVVIPGLFAVGEIACV
                     SVHGANRLGGNSLLDLVVFGRAAGLHLQESIAEQGVLRDASESDVEGSLDRLNRWNNN
                     RNGEDPVAIRKALQECMQHNFSVFREGDAMAKGLEQLKVIRERLKNARLDDTSSEFNT
                     QRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPERDDANWLCHTLYQPQTESM
                     TRRSVNMEPKLRPAFPPKIRTY"
     gene            5019..5735
                     /gene="sdhB"
                     /locus_tag="MOX77_002465"
     CDS             5019..5735
                     /gene="sdhB"
                     /locus_tag="MOX77_002465"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012133276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit
                     SdhB"
                     /protein_id="HCA3357968.1"
                     /translation="MKLEFSIYRYNPDVDNAPRMQDYTLEGEEGRDMMLLDALIQLKE
                     KDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPISALTQSGKKIVIRPLPGLPVIRD
                     LVVDMGQFYAQYEKIKPYLLNNGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCP
                     SFWWNPDKFIGPAGLLAAYRFLIDSRDTETDSRLEGMSDAFSVFRCHSIMNCVSVCPK
                     GLNPTRAIGHIKSMLLQRSA"
     gene            6261..9062
                     /gene="sucA"
                     /locus_tag="MOX77_002466"
     CDS             6261..9062
                     /gene="sucA"
                     /locus_tag="MOX77_002466"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HCA3357969.1"
                     /translation="MQNSALKAWLDSSYLSGSNQSWIEQLYEDFLTDPDSVDANWRLT
                     FQQLPGTGVKPDQLHSKTREYFRRQALAGSRHSSTISDPDTNVKQVKVLQLINAYRFR
                     GHQHANLDPLGLWKQERVADLDPSFHDLTEADFQETFNVGSFASGKETMKLGELLDAL
                     KQTYCGPIGAEYMHITSTEEKRWIQQRIESGRAAFSADEKKRFLNELTAAEGLERYLG
                     AKFPGAKRFSLEGGDALIPMLKEMVRHAGNSGTREVVLGMAHRGRLNVLINVLGKKPQ
                     DLFDEFAGKHKEHLGTGDVKYHMGFSSDIETEGGLVHLALAFNPSHLEIVSPVVMGSV
                     RARLDRLDEPSSNKVLPITIHGDAAVTGQGVVQETLNMSKARGYEVGGTVRIVINNQV
                     GFTTSNPLDARSTPYCTDIGKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVFI
                     DLVCYRRHGHNEADEPSATQPLMYQKIKKHPTPRKIYADKLEADKVATLEDATEMVNL
                     YRDALDAGECVVKEWRPMNMHSFTWSPYLNHEWDEAYPNKVEMKRLQELAKRISTVPE
                     AIEMQSRVAKIYGDRQAMAAGEKLFDWGGAENLAYATLVDEGIPVRLSGEDSGRGTFF
                     HRHAVIHNQTNGSTYTPLQHIHSGQGQFKVWDSVLSEEAVLAFEYGYATAEPRTLTIW
                     EAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLLPHGYEGQGPEHSSARLERYLQL
                     CAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKSLLRHPLAVSTLDELANGS
                     FQPAIGEIDELDPKAVKRVVMCSGKVYYDLLEQRRKNDQKDVAIVRIEQLYPFPHKAV
                     QEALQPYAHVHDFVWCQEEPLNQGAWYCSQHHFREVIPFGAALRYAGRPASASPAVGY
                     MSVHQKQQQDLVNDALNVD"
     gene            9077..10285
                     /gene="odhB"
                     /locus_tag="MOX77_002467"
     CDS             9077..10285
                     /gene="odhB"
                     /locus_tag="MOX77_002467"
                     /EC_number="2.3.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase complex
                     dihydrolipoyllysine-residue succinyltransferase"
                     /protein_id="HCA3357970.1"
                     /translation="MSSVDILVPDLPESVADATVATWHKKPGDAVVRDEVLVEIETDK
                     VVLEVPASADGILDAVLEEEGTTVTSRQILGRLREGNSAGKETSAKSEEKASTPAQRQ
                     QASLEEQNNDALSPAIRRLLAEHNLEASAIKGTGVGGRLTREDVEKHLAKGESKAPAV
                     EPAAQPALGARGEKRVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRKQYG
                     EVFEKRHGIRLGFMSFYVKAVVEALKRYPEVNASIDGDDVVYHNYFDVSMAVSTPRGL
                     VTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGNFTITNGGVFGSLMSTPI
                     INPPQSAILGMHAIKDRPMAVDGKVEILPMMYLALSYDHRLIDGRESVGFLVTIKELL
                     EDPTRLLLDV"
     gene            10427..11593
                     /gene="sucC"
                     /locus_tag="MOX77_002468"
     CDS             10427..11593
                     /gene="sucC"
                     /locus_tag="MOX77_002468"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012133271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HCA3357971.1"
                     /translation="MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWV
                     VKCQVHAGGRGKAGGVKVVKSKEEIRAFAENWLGKRLVTYQTDANGQPVNQILVEAAT
                     DIGKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQG
                     RELAFKLGLEGKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGA
                     DGNALFRQPDLREMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIV
                     KLHGGEPANFLDVGGGATKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDLIADGIIG
                     AVEEVGVNVPVVVRLEGNNAELGAKKLADSGLNIIAAKSLTDAAQQVVAAVEGK"
     gene            11593..12462
                     /gene="sucD"
                     /locus_tag="MOX77_002469"
     CDS             11593..12462
                     /gene="sucD"
                     /locus_tag="MOX77_002469"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HCA3357972.1"
                     /translation="MSVLINKDTNVICQGFTGSQGTFHSEQAIAYGTQMVGGVTPGKG
                     GTTHLGLPVFNTVREAVEATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPT
                     LDMLTVKVKLDEAGVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYE
                     AVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEA
                     AAYIKDHVTKPVVGYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRS
                     LADIGEALKAIIK"
     gene            14050..15618
                     /gene="cydA"
                     /locus_tag="MOX77_002470"
     CDS             14050..15618
                     /gene="cydA"
                     /locus_tag="MOX77_002470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HCA3357973.1"
                     /translation="MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSG
                     KQIYKDMTKFWGKLFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLM
                     AFFLESTFVGLFFFGWDRLSKVQHMCVTWLVALGSNLSALWILVANGWMQNPIAADFN
                     FETMRMEMVSFSELVLNPVAQVKFVHTVASGYVTGAMFILGISAYYMLKGRDFAFAKR
                     SFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPASFTLFGIPD
                     QDKQENHLAIQIPYALGIIATRSVDTPVIGLKDLMVQHEERIRNGMKAYELLEQLRAG
                     STDQAVRDQFNSMKKDLGYGLLLKRYTPNVTDATEAQIQQATKDSIPRVAPLYFAFRI
                     MVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQP
                     WAIGKVLPTAVANSSLTVGDLLFSMFLICGLYTLFLVAELFLMFKFARLGPSSLKTGR
                     YHFEQSTVTSQPAR"
     gene            15634..16773
                     /gene="cydB"
                     /locus_tag="MOX77_002471"
     CDS             15634..16773
                     /gene="cydB"
                     /locus_tag="MOX77_002471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000568269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HCA3357974.1"
                     /translation="MIDYEVLRFIWWLLVGILLIGFAVTDGFDMGVGMLTRFLGRNDT
                     ERRIMINSIAPHWDGNQVWLITAGGALFAAWPMVYAAAFSGFYVAMILVLASLFFRPV
                     GFDYRSKIEDPRWRNMWDWGVFIGSFVPPLVIGVAFGNLLQGVPFHVDEYLRLYYTGN
                     FFQLLNPFGLLAGIVSVGMIITQGATYLQMRTVGELHLRARATSQIAALVTLVCFALA
                     GVWVMYGIDGYVVTSAIDHHAASNPLTKEVAREAGAWLVNFNNAPILWLVPALGVVLP
                     LLTILTSRMEKGAWAFLFSSLTLACIILTAGIAMFPFVMPSSTMMNASLTMWDATSSQ
                     MTLNLMTWVAAVFVPIILIYTSWCYWKMFGRITKEHIESNTHSLY"
     gene            16788..16901
                     /gene="cydX"
                     /locus_tag="MOX77_002472"
     CDS             16788..16901
                     /gene="cydX"
                     /locus_tag="MOX77_002472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bd-I oxidase subunit CydX"
                     /protein_id="HCA3357975.1"
                     /translation="MWYFAWILGTLLACAFGIITALALEHVEAGKTGQEES"
     gene            17038..17319
                     /gene="ybgE"
                     /locus_tag="MOX77_002473"
     CDS             17038..17319
                     /gene="ybgE"
                     /locus_tag="MOX77_002473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyd operon protein YbgE"
                     /protein_id="HCA3357976.1"
                     /translation="MKYIYAVMDKRLLRALSFVMAIVLAGCMFWDPLRFAARTSTLEI
                     WHGLLLMWAVCAGIIHGVGFRPESVHWQGIFCPLLADIVLIVGLIFFFL"
     gene            17548..17952
                     /gene="ybgC"
                     /locus_tag="MOX77_002474"
     CDS             17548..17952
                     /gene="ybgC"
                     /locus_tag="MOX77_002474"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system-associated acyl-CoA thioesterase"
                     /protein_id="HCA3357977.1"
                     /translation="MNKYMFRWPIRVYYEDTDAGGVVYHASYVAFYERARTEMLRHHH
                     FSQQVLLAERVAFVVRKMTLEYYAPARLDDMLEVQTEITSMRGTALVFTQRIVNAENT
                     LLNEAEVLIVFVDPLKMKPRALPKSIVAEFKQ"
     gene            17949..18641
                     /gene="tolQ"
                     /locus_tag="MOX77_002475"
     CDS             17949..18641
                     /gene="tolQ"
                     /locus_tag="MOX77_002475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system protein TolQ"
                     /protein_id="HCA3357978.1"
                     /translation="MTDMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNA
                     AAREAEAFEDKFWSGIELSRLYQESQGRRDSLSGSEQIFYSGFKEFVRLHRANSHAPE
                     AVVEGASRAMRISMNRELETLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVK
                     QATLQMVAPGIAEALIATAIGLFAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILH
                     RQAFTVSESNKG"
     gene            18645..19073
                     /gene="tolR"
                     /locus_tag="MOX77_002476"
     CDS             18645..19073
                     /gene="tolR"
                     /locus_tag="MOX77_002476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015965300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colicin uptake protein TolR"
                     /protein_id="HCA3357979.1"
                     /translation="MARTRGRGRRELKSEINIVPLLDVLLVLLLIFMATAPIITQSVE
                     VDLPEANQSQAVSSNDDPPVIIEVSGVGQYSVVVDKDRMDQLPSEQVIAEVKRHLQAN
                     PKTVFLIGGAKEVPYDEIIKALNLLHSAGVKSVGLMTQPI"
     gene            19138..>19560
                     /gene="tolA"
                     /locus_tag="MOX77_002477"
     CDS             19138..>19560
                     /gene="tolA"
                     /locus_tag="MOX77_002477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell envelope integrity protein TolA"
                     /protein_id="HCA3357980.1"
                     /translation="MSKATEQNDKLKRAIIISAVLHIILFAVLIWSSFDEHIEASAGG
                     GGGSAIDAVMVDPGAVVQQYNRQQDQQASARGAEEERKKLQQQQAEELQQKQAAEQER
                     LKQLEKERLAAQEQQKQAEEAAKLAQQQQQAEEAAKAAA"
BASE COUNT         4681 a         4758 c         5470 g         4651 t
ORIGIN      
        1 tgccgggcag cgagctgtaa cgtaccagca gccagccgac taccgcgctg gaaagcagcg
       61 tcaccagcaa cacaaaaagc acgaccggcc agtagagggc gagggtggtc aatatcgaac
      121 cggttagatt ttgggcgatc atacagccga gaatcgcctg cgcggcgaga aaaataccgc
      181 gaggaagttg tagcgtgcta cctcgcaaac tcaacacgat acccgcaatc attggaccaa
      241 gcagcatcgc cgccggaagg tgcagataga gaaaaataag ggaaatgagc agcgataaca
      301 ggaacaacaa aaaccactgc aaaatcggca ttccatgctc cctgaatgat atttagcgaa
      361 accttaatta atcatagaga gtaacggggt aagaataaaa taatgaggat aagaaaaaag
      421 ggaaaatgta ccggatggcg agggttgcgt cgccatccgg ttgtcaatta acgcttcagc
      481 gccgatttaa aatcgcgttt atcgtagccg gtatacagct gacgaggacg ggcgattttc
      541 atgccgtcag tgtgcatttc attccagtgt gcaatccagc caacggtacg cgccatggcg
      601 aagatcacgg tgaacataga ggacggaatg cccatcgctt tcagaatgat gccggagtag
      661 aagtctacgt tcgggtacag tttcttctcg atgaagtacg ggtcgttgag cgcaatgtgc
      721 tcaagcccca tcgccacttc cagcagatcg tctttggtgc ccagctcttt cagcacttcg
      781 tggcaggttt cacgcatcac ggtggcgcgc ggatcgtagt ttttgtaaac acggtgaccg
      841 aagcccatca ggcggaaaga atcattcttg tctttcgcac ggcgaacaaa ttccggaatg
      901 tgtttaacag agctgatttc ttccagcatt ttcagcgcgg cttcgttggc gccgccgtgc
      961 gcgggtcccc acagggaggc gatcccggcg gcaatgcagg cgaacgggtt ggcgccgctt
     1021 gaacctgcgg tacgtaccgt tgacgtagag gcgttctgct catggtcagc gtgcaggatc
     1081 agaatacggt ccatcgcgcg ctccagtacc ggattcactt cataggtttc acacggcgtg
     1141 gagaacatca tgttcaggaa gttaccggcg taggaaaggt cgttgcgcgg ataaacaaac
     1201 ggctgaccga ttgaatattt gtaacacatc gccgccatgg tcggcatttt ggacagcagg
     1261 cggaacgccg cgatttcacg gtggcgcgga ttgttcacat ccagcgagtc gtggtagaac
     1321 gccgccagcg cgccagtgat cccgcacatt accgccatcg gatgtgagtc gcgacggaaa
     1381 gcatggaaca ggcgagtgat ttgctcatgg atcatcgtat ggcgggtgac tgtcgttctg
     1441 aactcgtcat actcttcctg cgtcggtttt tcgccgtaca gcaggatgta acagacttcc
     1501 agatagttgg aatcggtagc aagctggtca atcgggaaac cgcgatgcaa caaaatgcct
     1561 tcgtcgccgt cgatgaaggt gattttagat tcgcaggatg cggtagaggt gaaaccaggg
     1621 tcaaaagtaa aaactccttt tgaaccgaga ctacgaatat caataacatc ttgaccgagt
     1681 gtgcctttta gcacatccag ttcaatagca gtgtcaccag taagggtgat ttttgccttt
     1741 gtatcagcca tttacggtct ccttagcgcc ttattgctta agactgccgg aactcagact
     1801 tgccttctcc acgtcatctt cctcgtcgtt agtgcaggga aaattctgtg tatgcatcaa
     1861 tcaaccgtta ccagtttgtt atttggctcg ccgctctgtg aaagagggga tgacctgggt
     1921 acagagcaat gggcgtttgc aggtaacggc ttgattaatt tcgaattagc agcaaatcag
     1981 gaacgtagca atccgagtaa tgtaacctgt ctatcactaa taactgtcct gaaagaatgg
     2041 gtcaatatca ttgtactgtt acataactta ttaacaggtg aaagagtgac cccataactt
     2101 ttacgcatta tatgcttttt ctggtgttgt ttgtaacaat tttgtttaat gtttgtcaaa
     2161 tcagatgatt gaaaattaaa aaaatgttgt tatcgtgacc tgtgtcactg ttcaggataa
     2221 aacccgacaa actatatgta ggttaattgt aatgattttg tgaacgtcct atactgccgc
     2281 caggtctccg gaataccctg caatcccgag ccacccagcg ttgtaacgtg tcgttttagc
     2341 tactggaagc agtgttttac atgacgcgca gttatagaaa ggacgctgtc tgacccgcac
     2401 gcagaccgga ggaaggaaat cccgtcgtct ttctggctac aggtagattc acctctgtaa
     2461 ccgaagtctt aagggaataa taagaacagc atgtgggcgt tattcatgat aagaaatgtg
     2521 aaaaaacaaa gacctgtcaa tctggatcta caaacgattc ggttccccat cacagcgata
     2581 gcgtccattc tccatcgcgt atccggtgtg attactttca tcgccgtcgg catactactg
     2641 tggctactgg gcaccagcct ctcttctccg gaaggattcc agcaggccgc cgacatcatg
     2701 gacggcttca tcgttaaatt tatcatgtgg ggcatcctta ccgcgctggc gtatcacgtc
     2761 atcgtgggaa ttcgtcacat gttaatggat tttggctatc tggaagaaac attcgaagcg
     2821 ggtcaacgct ctgccaaaat ctcttttgtt atcactgtcg tgctttcact tctcgcagga
     2881 gtcctcgtat ggtaagcaac gcctccgcat taggacgcaa tggcgtacat gacttcatcc
     2941 tggtccgtgc taccgctatc gttctgacgt tatacatcat ctacatggtg ggttttttcg
     3001 ccacgagcgg cgaactgacc tttgaagcct ggaccggttt cttctcatcg gccttcacca
     3061 aagtcttcac tctgctggcg cttttttcca tcttaattca tgcctggatc ggcatgtggc
     3121 aggtgttaac cgactacgtt aaaccactgg cagtgcgtct gatactgcaa ctcgttattg
     3181 ttgttgcgct ggtggtttac gtcatctatg gatttgttgt ggtgtggggt gtgtaatgaa
     3241 actgccagtc agagaatttg atgctgttgt gattggtgcc ggtggcgcag gtatgcgcgc
     3301 ggcgctgcaa atttcccaga gcggccaaac ctgtgcgctg ctctcgaaag tcttcccgac
     3361 ccgttcccat accgtttccg cgcagggcgg tatcaccgtg gcgctcggca atacccatga
     3421 agataactgg gaatggcaca tgtacgacac cgtaaaaggg tcggactaca ttggtgacca
     3481 ggatgccatc gaatatatgt gtaagaccgg accggaagcg attctggaac tggagcacat
     3541 ggggctaccg ttctcccgtc ttgatgatgg acgtatctat cagcgcccgt tcggcggcca
     3601 gtcgaaaaac tttggcggcg agcaggcggc acgtaccgcg gcggcggctg accgtaccgg
     3661 tcacgccttg ctacatacgc tgtatcaaca gaatttgaaa aaccacacca cgattttctc
     3721 cgaatggtat gcgctggatc tggtgaaaaa ccaggatggc gcggtggtgg ggtgtaccgc
     3781 actgtgcatc gaaacctgtg aagtggtgta cttcaaagct cgcgcgacgg tgctggcgac
     3841 cggcggcgca ggccgtatct accagtccac caccaacgct catatcaata ccggtgacgg
     3901 tgtcggtatg gcgctgcgtg ccggtgtccc ggtgcaggat atggaaatgt ggcagttcca
     3961 cccgaccggc atcgccgggg cgggcgtgct ggtgacagaa ggctgccgcg gcgaaggcgg
     4021 ttacctgctg aacaaacacg gcgagcgctt tatggagtgt tatgcgccga acgccaaaga
     4081 ccttgcgggt cgtgacgtgg tggcgcgttc catcatgatc gaaatccgtg aaggtcgcgg
     4141 ctgtgatggt ccgtgggggc cgcacgctaa actgaaactg gatcatctgg gtaaagaggt
     4201 gctggaatct cgcctgccgg gtatcctgga gctgtcccgc actttcgctc acgtcgatcc
     4261 ggtgaaagag ccgattccgg ttatcccgac ctgccactac atgatgggcg gtattccgac
     4321 taaagtgacc ggtcaggcgc tgaccgtgaa cgagcagggc gaagacgtgg tgattccggg
     4381 gctgtttgcg gtaggcgaaa tcgcctgtgt atcggttcac ggcgccaacc gtctgggcgg
     4441 taactcactg ctggatctgg tggtctttgg ccgcgcggcg gggctgcatt tacaggaatc
     4501 catcgccgag cagggcgtgc tgcgcgacgc cagcgagtct gacgttgaag gttctctgga
     4561 tcgcctgaat cgctggaaca ataaccgcaa tggcgaagat ccggtggcta tccgcaaagc
     4621 attgcaggag tgtatgcagc ataacttctc cgtattccgt gaaggcgacg cgatggcgaa
     4681 agggcttgag cagttgaaag tgatccgcga gcgtctgaaa aacgcccgtc tggatgacac
     4741 gtccagcgag tttaataccc agcgtgttga gtgtctggag ctggataacc tgatggaaac
     4801 cgcctacgcc actgccgtat cagccaactt ccggacggaa agccgcggcg cgcatagccg
     4861 cttcgatttc ccggagcgtg atgatgccaa ctggttgtgt cataccctgt atcagccgca
     4921 aacggaatcc atgacgcgcc gaagcgtcaa tatggaaccg aaactgcgtc cggcgttccc
     4981 gccgaagatt cgtacttatt aattgcggag acaggatgat gaaactcgaa ttttcgattt
     5041 atcgttataa cccggatgtc gataacgctc cgcgtatgca ggattacacc ctggaaggcg
     5101 aagaagggcg cgacatgatg ctgctggatg cgttaatcca gcttaaagaa aaagatccca
     5161 gcctttcttt ccgccgttcc tgccgcgaag gtgtgtgtgg ttctgatggt ttgaatatga
     5221 acggtaagaa tggtctggcc tgtattactc ctatttcggc gctgactcag tcgggtaaga
     5281 agattgtgat tcgcccgctg cccggtttgc cggtgatccg cgatttggtg gtagacatgg
     5341 ggcaattcta cgcacaatat gagaagatta agccttactt attgaataat gggcaaaatc
     5401 caccggcacg tgagcattta cagatgccgg agcagcgtga aaaactcgat gggctgtatg
     5461 aatgtattct ttgcgcctgt tgctcaacat cctgcccgtc attctggtgg aacccggata
     5521 agtttatcgg tccggcgggg ctgctcgcgg cgtatcgatt cctgatcgat agtcgtgata
     5581 ccgagactga cagtcgtctg gaagggatga gcgatgcatt cagcgtattc cgctgtcaca
     5641 gcattatgaa ctgcgtcagt gtatgtccta agggactgaa cccgacgcgc gctatcggcc
     5701 atattaagtc gatgctgttg cagcgtagcg cgtaagtagt tgtagtggtt gccggatggc
     5761 gacgtaccgt cttatccggc ctacgggtta cgtattctgt aggcctgata agccaggtgc
     5821 catcgggcaa tagaagtgca ggaaacctct aaaaactgcc atatgattag taataatcga
     5881 gatgttcaga gcgagacaag gcgcggtctg aacgaatctt cgggagcata gttaactatg
     5941 tgaccggagt gagcgaaggc cgcaacgcag tcgtagcctg aacagcgaag attattagac
     6001 agtttttaaa ggttccttag cggacgcaga tgacacgaca gtccgcaaca agtgaacccc
     6061 ggcacgcata cagcgtatgc gtggttagta tccacggcga aatactcgtc atagttcacg
     6121 ttgcatgtgc gttggctgca cttgctcacc ccagtcactt actggatgta agctcccagg
     6181 gattcgcaag cttgccgcct tcctgaaacg tgacctattt agagtattaa ataagcagaa
     6241 aagatgctta agggatcacg atgcagaaca gcgctttgaa agcctggttg gactcttctt
     6301 acctctctgg ttcgaatcag agctggatag aacagctcta tgaagacttc ttaaccgatc
     6361 ctgactcggt agacgctaac tggcgtttga cgttccagca gttacctggt accggagtca
     6421 aaccggatca actccattca aaaacacgtg aatatttccg gcggcaggcg ttggctggct
     6481 cacgtcactc ttctacgatt tccgaccctg acaccaatgt gaagcaggtt aaagtcctgc
     6541 agcttatcaa cgcttatcgt ttccgtggcc atcagcatgc aaacctcgat ccgctgggac
     6601 tgtggaaaca agaacgcgtg gcggatctgg acccttcttt ccatgatttg accgaggccg
     6661 atttccagga aaccttcaat gtcggctcct ttgccagcgg caaagagacg atgaagctgg
     6721 gggagctgct cgacgcgctc aaacagacct actgcggccc gattggcgct gagtatatgc
     6781 acatcaccag caccgaagag aaacgctgga tccaacagcg catcgaatcc ggtcgtgcgg
     6841 cctttagcgc tgacgagaaa aaacgcttcc tgaacgaact gaccgccgct gaagggctgg
     6901 aacgttatct gggcgccaaa ttcccgggtg cgaaacgttt ctcgctcgag gggggagatg
     6961 cgctgatacc tatgctgaaa gagatggttc gccatgcggg taacagcggc actcgcgaag
     7021 tggtgctggg gatggcgcac cgcggtcgtc tgaacgtgct gatcaacgta ctgggtaaaa
     7081 aaccgcagga tctgttcgac gagtttgccg gtaaacataa agaacatctg ggtaccggcg
     7141 acgtgaagta tcacatgggc ttctcgtcag atatcgaaac tgaaggcggt ctggttcacc
     7201 tggcgctggc gtttaaccca tcgcatctgg aaattgtgag cccggtggtg atgggctccg
     7261 tgcgcgcccg tctggaccga ctggacgaac cgagcagtaa taaagtgctg ccgatcacta
     7321 ttcacggcga cgccgcggtg accggccagg gcgtggttca ggaaaccctg aacatgtcga
     7381 aagcgcgcgg ttacgaagtg ggcggtacgg tacgtatcgt tatcaacaac caggtgggct
     7441 tcactacctc taacccactg gatgcgcgtt caacgcctta ctgcaccgat atcggtaaaa
     7501 tggtccaggc gccgattttc cacgtcaatg cggacgatcc ggaagccgtc gcttttgtga
     7561 cccgtctggc gctggacttc cgtaatacct ttaaacgcga tgtgttcatc gatctggtgt
     7621 gctaccgccg tcacggccac aacgaagccg acgagccaag cgcaacccag ccgctgatgt
     7681 accagaaaat caaaaagcat ccgacgccgc gtaaaatcta cgccgacaag ctggaagctg
     7741 ataaggtcgc aacgctggaa gatgccaccg aaatggtcaa cctctatcgc gatgcgctgg
     7801 atgcaggcga atgcgtggtg aaagagtggc gtccgatgaa tatgcactcg ttcacctggt
     7861 cgccgtatct aaaccacgaa tgggatgaag catacccgaa caaggtagaa atgaagcgtc
     7921 tgcaggagct ggcaaaacgt atcagcaccg tgccggaagc cattgaaatg cagtctcgcg
     7981 tggcgaaaat ttatggcgac cgtcaggcaa tggcggcagg cgagaaattg tttgactggg
     8041 gcggcgcgga aaatctggct tacgccacgc tggtcgatga aggcattccg gtgcgcctgt
     8101 ccggggaaga ctccggtcgc ggcaccttct tccatcgtca tgcggtgatc cacaaccaga
     8161 cgaacggctc aacgtatacg ccgttgcagc atattcacag cggtcaggga cagtttaaag
     8221 tctgggactc cgtgctgtct gaagaagcgg tactggcttt tgaatacggt tatgccacgg
     8281 cggaaccacg taccctgact atctgggaag cgcagtttgg cgattttgcc aacggcgcgc
     8341 aggtagtgat tgaccagttc atctcctctg gcgagcagaa atggggccgg atgtgcggtc
     8401 tggtgatgct gttgccgcac ggctatgaag ggcaggggcc ggagcactcc tccgcgcgtc
     8461 tggaacgtta tctgcaactt tgcgccgagc agaatatgca ggtttgcgta ccgtccactc
     8521 cggcgcaggt ctaccatatg ctgcgccgtc aggcgctgcg cgggatgcgt cgtccgctgg
     8581 tggtgatgtc gccgaaatcg ctgctgcgtc acccgctggc ggtttccacg cttgatgaac
     8641 tggcgaacgg ttccttccag ccggccattg gcgaaattga cgagctggac cctaaagccg
     8701 taaaacgcgt ggtaatgtgt tctggtaagg tttattacga cctgctggaa caacgtcgca
     8761 aaaacgacca gaaagatgtc gctatcgtgc gcatcgaaca gctctatccg ttcccgcata
     8821 aagcggtgca ggaagcgctg caaccatacg ctcacgtcca tgattttgtc tggtgccagg
     8881 aagagccgct caaccagggc gcatggtact gcagtcagca tcatttccgt gaagtgattc
     8941 cgtttggggc cgctctgcgt tatgcaggtc gcccggcctc cgcctctccg gcggtagggt
     9001 atatgtccgt tcaccagaaa cagcaacaag atctggttaa tgacgcgctg aacgtcgatt
     9061 aaataaagga taaataatga gtagcgtaga tattcttgtt cccgacctgc ctgagtccgt
     9121 agcggacgcg accgtcgcca cctggcataa aaaaccgggc gatgcggttg ttcgtgacga
     9181 agtgctggta gaaatcgaaa ctgacaaagt ggtactggaa gtaccggcat cagcggacgg
     9241 cattctggat gcggttctgg aagaagaggg gacgactgtc acctctcgcc agatcctggg
     9301 tcgcctgcgt gaaggcaaca gcgcgggtaa agagaccagc gcgaaatctg aagagaaagc
     9361 gtctacgccg gcacagcgcc agcaggcgtc gctggaagaa caaaacaacg atgcgctcag
     9421 cccggcgatc cgtcgcctgc tggctgaaca caatctggaa gccagcgcca ttaaaggcac
     9481 tggtgtgggt gggcgtctga cccgtgaaga tgtggaaaaa catctggcga aaggcgagtc
     9541 taaagcaccc gctgttgaac ctgcagcaca acccgctctg ggcgcgcgcg gcgaaaaacg
     9601 cgtgccaatg acccgcctgc gtaagcgcgt ggccgagcgt ctgctggaag cgaaaaattc
     9661 caccgccatg ctgacgacct tcaatgaagt caacatgaag ccgattatgg atttgcgtaa
     9721 gcagtatggc gaagtgtttg aaaaacgtca tggtatccgc ctgggcttta tgtccttcta
     9781 cgtgaaagcg gtagtggaag cgctgaagcg ttatccggaa gtgaacgcct ctatcgacgg
     9841 cgatgacgtg gtgtatcaca actactttga tgtgagcatg gcggtgtcta cgccgcgcgg
     9901 cctggtcacg ccggtcctgc gtgacgtgga tacgctgggc atggctgaca tcgagaaaaa
     9961 aattaaagaa ctggctgtca aaggccgcga cggcaagctg accgtagaag acctgaccgg
    10021 cggtaacttt accattacca acggcggcgt attcggttcg ctgatgtcta ccccgatcat
    10081 caacccgccg cagagcgcga ttctgggaat gcatgctatt aaagacaggc cgatggcggt
    10141 ggatggcaag gtggaaatcc tgccgatgat gtacctggcg ctctcttacg atcatcgcct
    10201 gatcgatggt cgcgaatccg tgggcttcct ggtcaccatc aaagagttgc tggaagatcc
    10261 gacccgtctg ctgttggacg tgtagtcagc aagagcatca cctgctacct gtaggccgga
    10321 taaggcgttc acgccgccat ccggcgatgg tgtaatgcct gatggcgcgc agctttcagg
    10381 cctacaggtc taaagataac gattacctga aggatggaca gaacacatga acttacatga
    10441 atatcaggca aaacaacttt ttgcccgcta tggcttaccg gcgccggtgg gttatgcctg
    10501 tactactccg cgtgaagccg aagaagccgc gtctaaaatc ggtgccggcc cgtgggtagt
    10561 gaaatgtcag gttcacgctg gcggccgcgg caaagcgggc ggtgtgaagg tagtaaaaag
    10621 caaagaagag attcgcgcct ttgcggaaaa ctggctgggc aaacgtctgg tgacctatca
    10681 aacagacgct aatggccaac cggtaaacca gattctggtt gaagcggcga ccgacatcgg
    10741 caaagaactg tacctcggcg cggtggttga ccgtagttct cgtcgcgtgg tctttatggc
    10801 gtctaccgaa ggtggcgtag agatcgaaaa agttgcggag gaaaccccgc atctgatcca
    10861 taaagtcgcg ctcgatccgc tgaccggccc gatgccgtat cagggacggg aactggcgtt
    10921 caaattgggt ctggaaggta aactggtgca gcagttcacc aaaatcttta tgggcctggc
    10981 aaccattttt cttgagcgcg acctggcgct aatcgaaatt aatccgctgg tgatcactaa
    11041 gcagggcgat ctgatttgcc tcgacggcaa gctgggcgct gacggcaacg cgctgttccg
    11101 ccagccggat ctgcgcgaaa tgcgcgacca gtctcaggaa gacccgcgtg aagcgcaggc
    11161 ggcacagtgg gaactgaact acgtcgcgct ggacggcaac atcggttgca tggtgaacgg
    11221 cgcgggcctg gcgatgggca ccatggacat cgttaagctg catggcggcg aaccggctaa
    11281 cttccttgac gtaggcggcg gcgcaaccaa agagcgcgtc accgaagcgt ttaaaattat
    11341 cctctcggat gacaacgtga aagcggttct ggttaacatc ttcggcggta tcgtccgttg
    11401 tgacctgatt gccgacggta tcatcggcgc ggtggaagaa gtgggcgtga acgttccggt
    11461 ggtggtgcgt ctggaaggca acaacgccga actcggcgcg aagaaactgg ctgacagtgg
    11521 cctgaatatt attgcagcga aaagtctgac ggatgcagct cagcaggttg ttgccgcagt
    11581 ggaggggaaa taatgtccgt tttaattaat aaagatacca acgttatctg ccagggcttc
    11641 accggtagcc aggggacttt ccactccgaa caggcgattg cttacggtac gcaaatggtc
    11701 ggcggcgtaa cgccgggcaa aggcggcacc acgcatctgg gtctgccggt gttcaacacc
    11761 gtgcgcgaag cggtagaagc taccggtgcg accgcatccg ttatctacgt cccggcgccg
    11821 ttctgcaaag actccattct ggaagcgatc gacgcaggca tcaaactgat tatcaccatc
    11881 accgaaggta ttccgacgct ggatatgctg accgtgaaag tgaagctgga cgaagcgggc
    11941 gtacgcatga tcggcccgaa ctgcccaggt gtgatcaccc cgggcgaatg caaaatcggc
    12001 atcatgccgg gtcacattca taagccgggt aaagtgggta tcgtttcccg ttccggcacg
    12061 ctgacctatg aagcggttaa gcagaccacc gactacggtt tcggccagtc cacctgcgtg
    12121 ggtatcggcg gcgacccgat tccgggctct aacttcatcg acattctgaa actgttccag
    12181 gaagatccgc agactgaagc gatcgtgatg atcggcgaga tcggcggcag cgcggaagaa
    12241 gaagcggcgg cttatattaa agaccacgtg accaagccgg ttgttggcta tatcgcgggc
    12301 gttaccgcgc cgaaaggcaa acgtatgggc cacgctggcg ccatcattgc cggtggtaaa
    12361 ggtaccgctg atgagaaatt cgctgctctg gaagcggctg gcgtgaagac ggttcgcagc
    12421 ctggccgata tcggcgaagc gctgaaagca attataaaat aaaaactcgc tgttcctgcg
    12481 ggaacagata aatgtccgtt ttcgacatgg ttggccacct ttacggtggc cttttttatg
    12541 gttttattgt ttgtggcaaa gtacgggtga agcatccggg atataaaatt attggctttg
    12601 taaatattga ggtataggaa aatgatgact cattaaaaaa acatggtgga gtctgaaaat
    12661 aattgataat aaccgtctgg cagcggcagt aaatttactc agtttgccgg ttaactcttt
    12721 ttcagcaaat acagatgctg tcttagtgaa agacctgccg acctcactgg agacggatta
    12781 tgcgctttcc gccatgaaaa aaacgcattg cagcattaca ctatgttgat gctaacctct
    12841 atagtaaatt gacgcttgac tctgtggccg cgcatgtttg cctgagcgcg aactacacgt
    12901 ctcctcagat gtatcgcgct tacacagact gcttgtttaa tggcagaata aaacagctat
    12961 tttaatcata agagtaccgg cattatttcc ctgaaatatt aaagatatcg tttaataaat
    13021 tatatgaact tttgctggtt aaaagaggtt aactttaaaa attattaaga acttattgac
    13081 actatgcgtt cgtgattaat catgtttaaa gggtatttat ggctgcgaat aaacagaatt
    13141 atcactatga gtgacgtaga aattaagggt taatctgtga aggtgatgac agaatcttcg
    13201 ctataataat tatggggagg taaatacggt gttgttgaaa taaagaaaaa gtagctaata
    13261 aaatgtttgt ttgatcctgg ctatctggaa ggcttattag cgataattaa ggcgataacc
    13321 tggtaagatg atcctggcca ttagtcgtcg ggaaagggaa gttcgggcag ggtaatcccg
    13381 gtgggatgat ggcgcgtgtg caatgagata gtttctttgc ggtgttaatt ataagtaaaa
    13441 taaaaataga ctaaatgtat aaaataataa gtggtgataa cctgcagaaa aaatctgtga
    13501 gctatttagc aataattgaa catcaatgtg gaatgttttt tactggatgc ggggcagtaa
    13561 aaaacgcaca aaatgtttag ccttatcgaa taagcctctt tttacagggg gtttgaaatt
    13621 actctttgca aaaacaaaaa gttaacaaaa aattcaccat gcattcaatg aataaacatt
    13681 attaacatta actttaaaaa ttgattttaa tcaatattta aatgttggaa aagagcatca
    13741 aaactggtta aattgtccgt gatcaaattc cctgaaaagc gatagattag ccataaattg
    13801 atcgctgtcg aaaaaagcaa atctgaccca ctaaaaacct gtttattgta agggttttac
    13861 ggcgtaatat atttgcggga tcaatttggg ttttttatta acatgtttgt aacttttcat
    13921 cattactgtt tccttcccga ggggatagta cgatggaagg ccgcaaataa atttgtattg
    13981 gggcatgcgt gtgacccttt ctaacggggt tcactctcgg agtcttcatg cgatgagcaa
    14041 ggagtcatga tgttagatat agtcgaactg tcgcgcttac agtttgcctt gaccgcgatg
    14101 taccacttcc tgtttgtgcc gctaacgctc ggtatggcgt tcctgctggc cattatggaa
    14161 acggtatacg tcctttccgg caaacagatt tataaagata tgaccaagtt ctggggcaag
    14221 ttgtttggta tcaactttgc tctgggtgtg gctaccggtt tgaccatgga gttccagttc
    14281 gggacaaact ggtcgtacta ctcccactat gttggggaca tcttcggtgc gccgctggcc
    14341 atcgaaggtt tgatggcctt cttcctcgaa tccacctttg taggtctgtt cttcttcggc
    14401 tgggatcgtc taagtaaagt tcagcatatg tgcgtcacct ggctggtggc tctggggtcc
    14461 aacctctccg cgttgtggat tctggtagcg aacggctgga tgcaaaaccc aatcgctgcg
    14521 gatttcaatt tcgaaaccat gcgtatggaa atggtgagct tctctgaact ggtgctgaac
    14581 ccggtagcac aggtgaaatt tgttcacact gtggcgtccg gctatgtcac cggcgcgatg
    14641 ttcatcctcg gtatcagcgc ttactacatg ctgaaaggtc gtgacttcgc ctttgctaaa
    14701 cgctcctttg ctattgccgc cagcttcggt atggctgccg tactgtccgt tatcgtactc
    14761 ggtgacgaat ccggttacga aatgggcgac gtgcagaaaa ccaagctcgc tgcgattgaa
    14821 gctgaatggg aaacgcaacc tgctccggcc tcctttaccc tgttcggcat tcctgaccag
    14881 gacaaacagg aaaaccatct ggcgattcag atcccttatg cgctcggcat tatcgctacg
    14941 cgttccgtgg acacgccggt tattggcctg aaagatctca tggttcagca tgaagagcgt
    15001 atccgtaacg ggatgaaagc ttatgagctg ctggagcagc tgcgcgccgg ttctaccgac
    15061 caggccgttc gcgaccagtt taacagcatg aagaaagatc tcggttacgg cctgctgctg
    15121 aaacgctata cgcctaatgt gactgacgcg accgaagcgc agatccagca agcgacgaaa
    15181 gattctattc ctcgcgttgc gccgctgtac ttcgctttcc gtatcatggt ggcgtgcggc
    15241 ttcctgctgc tggcgattat cgcactttcc ttctggagcg tgattcgtaa ccgcatcggt
    15301 gagaaaaaat ggctgttgcg tgcggcgctg tacggtattc cactgccgtg gattgcggtt
    15361 gaagcaggtt ggttcgtcgc cgagtatggt cgtcagccgt gggcgatcgg caaagtgttg
    15421 ccgacagccg tggcgaactc atcgctgacc gtgggcgatc tgctgttctc catgttcctg
    15481 atttgcggcc tgtataccct gttcctggtg gcagaattgt tcctgatgtt caaatttgca
    15541 cgccttggcc caagcagcct gaaaaccggt cgctatcact ttgagcagtc caccgtgact
    15601 tctcagccgg cacgctaaga caggagtcgt caaatgatcg attatgaagt actacgtttt
    15661 atctggtggc tgctggttgg cattttgcta attggtttcg ccgtcaccga tgggttcgac
    15721 atgggggtgg ggatgctcac ccgtttcctc ggtcgtaacg ataccgaacg tcgaattatg
    15781 attaactcta tcgccccgca ctgggacggt aaccaggtgt ggttgatcac cgcgggcggc
    15841 gcgttgtttg ctgcctggcc gatggtttac gccgcggcgt tctccggttt ctatgtggcg
    15901 atgatcctgg tgctggcgtc tttgttcttc cgtccggtcg gttttgatta ccgttccaag
    15961 attgaagacc cgcgctggcg caacatgtgg gactggggcg tgttcatcgg tagctttgtg
    16021 ccgccgctgg tgattggcgt ggcctttggc aacctgttgc agggcgtacc gttccatgtg
    16081 gatgagtatc tgcgtctgta ctataccggt aacttcttcc agttgctgaa cccgtttggt
    16141 ctgctggcgg gtatcgtaag cgtagggatg atcatcacgc agggggcgac ttacctgcaa
    16201 atgcgtaccg ttggcgaact gcacctgcgc gcgcgcgcca cctcgcagat tgcggcgctg
    16261 gtgacattag tgtgctttgc gctggcgggc gtttgggtaa tgtatggtat tgatggttat
    16321 gtcgtgacat ccgcgattga tcatcatgct gcctctaacc cgctgactaa agaagtggcg
    16381 cgcgaagccg gcgcctggct agtgaacttt aataatgctc cgatcctgtg gttggttccg
    16441 gctctgggcg tggttctgcc gctgctgact atcctgactt cccgtatgga gaaaggcgcg
    16501 tgggcattcc tgttctcttc gctgacgttg gcctgcatta ttctgacggc gggtatcgct
    16561 atgttcccat ttgtgatgcc gtccagcacg atgatgaatg ccagtctgac catgtgggat
    16621 gcgacatcca gccagatgac gctgaacctg atgacctggg ttgcggcggt gttcgtaccg
    16681 attattctga tctacaccag ctggtgttac tggaaaatgt tcggtcgtat cactaaagaa
    16741 catattgaaa gcaacaccca ctctctgtac taagtaagga gcttaaaatg tggtatttcg
    16801 catggattct gggaacgctt cttgcctgtg cattcgggat cattaccgcc ctggcgcttg
    16861 agcacgttga agcgggtaaa accggtcaag aagaaagcta atgattcata ttgtcgctat
    16921 gcaatataca aaatcattta agttgcatcg cggcggcaag gctgcgaatc cccaggagct
    16981 tacatcagta agtgactggg gtgagcagcc gcagccaaca aagaggcagc ttagaggatg
    17041 aagtatattt atgcggtaat ggacaagcgc ctcttaaggg cgctttcctt cgtgatggcg
    17101 atagtgctgg caggatgtat gttctgggac ccgttacggt ttgccgccag gaccagcacg
    17161 cttgaaatct ggcacggatt attgctgatg tgggcggttt gcgcaggcat aatccacggc
    17221 gtgggttttc gccctgaatc cgtacactgg caagggattt tttgtccgct ccttgcggat
    17281 atcgtcctta tcgtcggcct gattttcttc ttcttgtgaa taagaaacct ccttaaaaat
    17341 ataggggctt gcataagccc atatattttt actctccctt aacttccccc cattcccaag
    17401 cctcattcct acgcgtatag tagcaacgtt taaaagctct acttttgttg cattaccggg
    17461 atgtaaagtg aatacaaggc gatatacaac ggcattcttg aggcattacg gcggcaagcg
    17521 gatgacgcca acaaagaggc tgcagggatg aataagtata tgtttcgatg gccaattcga
    17581 gtttattacg aagacacgga cgccggcggt gtggtttatc acgccagcta tgtcgctttt
    17641 tatgaaagag cgcgcacgga gatgctgcgt caccatcact tcagccaaca ggtgctgctg
    17701 gcggagcggg tcgcctttgt ggtgcgcaag atgacgctgg aatactatgc gcctgcgcgg
    17761 ctcgacgata tgcttgaagt tcaaacagaa attacgtcaa tgcgtggcac cgctttggtt
    17821 ttcacgcaac gcattgtcaa cgcagagaac acgctgctaa atgaagcaga ggttctgatt
    17881 gttttcgttg atccactcaa aatgaagcct cgtgcgcttc ctaagtctat tgtcgcggag
    17941 tttaagcagt gactgacatg aatatccttg atttgttcct gaaggcaagc cttctagtta
    18001 aacttatcat gttgattttg attggttttt caatagcatc ctgggccatc attatccagc
    18061 gaacgcgtat cctgaacgcc gctgcgcgtg aggcggaagc gtttgaagat aaattctggt
    18121 ccggaatcga actatcgcgt ctgtaccagg aaagccaggg gagacgcgat agtctgtcgg
    18181 gctcggaaca aatcttttat agcgggttca aagagtttgt ccggctccat cgcgccaaca
    18241 gccatgcgcc ggaggcagtg gtagaggggg cgtcgcgtgc gatgcgcatc tccatgaacc
    18301 gagagctgga aacgctggaa acgcatatcc cgtttcttgg cacggtaggc tctatcagtc
    18361 cttatatcgg tctgtttggc accgtatggg ggattatgca tgcgtttatc gccctgggtg
    18421 cggtgaaaca ggcgactctg caaatggttg cgccgggtat tgccgaagca ttgattgcca
    18481 cggcgattgg tctgtttgcc gctatccctg cggttatggc ttacaaccga ctgaatcagc
    18541 gcgtgaacaa gctggaactg aattacgaca actttatgga agagtttacc gcgattctgc
    18601 accgccaagc gtttaccgta agcgaaagca acaaggggta agccatggcc agaacgcgtg
    18661 gacgaggtcg tcgcgaactt aagtccgaaa tcaatatcgt accgctactc gacgtactgt
    18721 tggtgctgct gctgatcttt atggcaaccg cgccgatcat tacccagagc gtggaagtcg
    18781 acttaccgga ggcgaatcag tcgcaggcgg tcagtagtaa cgacgatccg ccggtcatta
    18841 ttgaggtttc cggagtaggg caatacagcg tagtggttga taaagatcga atggatcaac
    18901 tgccgtctga acaggtgatc gcagaagtaa agcgtcatct gcaggctaat ccgaaaacag
    18961 tctttttaat cggcggcgcg aaagaggtgc cgtacgatga aataattaaa gcgctgaact
    19021 tgttacacag cgcgggcgta aaatcggttg gcttaatgac gcagccaatc tgaagtctgc
    19081 atcccgttgg cttgaaagac ggcgagtaac aggcgaacag ttttttggga accgagagtg
    19141 tcaaaggcaa ccgaacaaaa cgacaagctc aaacgggcga taattatttc agccgtgctg
    19201 catatcatct tatttgcagt gctgatctgg agttcgtttg atgagcatat agaggcttct
    19261 gccggcggcg gcggcggttc cgctatcgac gcggtgatgg tcgatcctgg cgccgttgtg
    19321 cagcagtaca accgtcagca ggatcaacag gccagtgcca gaggcgcgga agaagagcgt
    19381 aaaaagctgc aacagcagca agcagaggag ctgcagcaga agcaggctgc tgaacaggag
    19441 cggttgaaac aacttgagaa agaacgttta gcggctcagg agcagcaaaa gcaggctgaa
    19501 gaagcggcaa aactggcgca acagcagcaa caggccgaag aagcggcgaa agcggcggcg
//
LOCUS       DAGWFR010000068        19255 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.069, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000068 DAGWFR010000000
VERSION     DAGWFR010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 19255)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19255)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19255
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.069"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..190
                     /locus_tag="MOX77_002478"
     CDS             <1..190
                     /locus_tag="MOX77_002478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tRNA(Met) cytidine acetyltransferase"
                     /protein_id="HCA3357981.1"
                     /translation="ALRGRLEEKASDAELCARLRISGRKALLALQRAQAAQALIALDA
                     GRTQRLRDVMPGGGDHAG"
     gene            complement(217..417)
                     /locus_tag="MOX77_002479"
     CDS             complement(217..417)
                     /locus_tag="MOX77_002479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YpfN family protein"
                     /protein_id="HCA3357982.1"
                     /translation="MDWLAKYWWILVLVFLVGVLLNVIKDLKRIDHKKFLANKPELPP
                     HRDFNDKWDDEDDWPKKDQPKK"
     gene            complement(445..1572)
                     /gene="dapE"
                     /locus_tag="MOX77_002480"
     CDS             complement(445..1572)
                     /gene="dapE"
                     /locus_tag="MOX77_002480"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020078199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HCA3357983.1"
                     /translation="MSCPVIELTQQLIRRPSLSPDDVGCQALMIERLRKIGFTIEHMD
                     FGDTQNFWAWRGRGETLAFAGHTDVVPAGDVDRWINPPFEPTIRDGMLFGRGAADMKG
                     SLAAMVVAAERFVAQHPHHRGRLAFLITSDEEASAKNGTVKVVEALMARNERLDYCLV
                     GEPSSTEIVGDVVKNGRRGSLTCNLTIHGVQGHVAYPHLADNPVHRAAPFLNELVAIE
                     WDRGNDFFPATSMQIANIQAGTGSNNVIPGELFVQFNFRFSTELTDEMIKERVHALLE
                     KHQLRYTVDWWLSGQPFLTARGKLVDAVVNAIEHYNEIKPQLLTTGGTSDGRFIARMG
                     AQVVELGPVNATIHKINECVNAADLQLLARMYQRIMEQLVA"
     gene            complement(1576..1932)
                     /locus_tag="MOX77_002481"
     CDS             complement(1576..1932)
                     /locus_tag="MOX77_002481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsC family reductase"
                     /protein_id="HCA3357984.1"
                     /translation="MITLYGIKNCDTIKKARRWLEEHGIDYRFHDYRVDGIDLPLLNT
                     FIAELGWQPLLNTRGTTWRKLDEGHRSGITDADSAAALMVEQPAIIKRPLLCAPGKPM
                     LLGFSESRYQQFFDEV"
     gene            2349..2420
                     /gene="ypfM"
                     /locus_tag="MOX77_002482"
     CDS             2349..2420
                     /gene="ypfM"
                     /locus_tag="MOX77_002482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015606095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YpfM"
                     /protein_id="HCA3357985.1"
                     /translation="MNVNWGTGELGNWKDFIEVMLRK"
     gene            complement(2522..5635)
                     /gene="acrD"
                     /locus_tag="MOX77_002483"
     CDS             complement(2522..5635)
                     /gene="acrD"
                     /locus_tag="MOX77_002483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease AcrD"
                     /protein_id="HCA3357986.1"
                     /translation="MANFFIDRPIFAWVLAILLCLTGALAIFSLPVEQYPDLAPPNVR
                     ITANYPGASAQTLENTVTQVIEQNMTGLDNLMYMSSQSSGTGQATITLSFIAGTDPDE
                     AVQQVQNQLQSAMRKLPQAVQDQGVTVRKTGDTNILTIAFVSTDGSMDKQDIADYVAS
                     NIQDPLSRVNGVGDIDAYGSQYSMRIWLDPAKLNSFQMTTKDVTDAIESQNAQIAVGQ
                     LGGTPSVDKQALNATINAQSLLQTPQQFRDITLRVNQDGSEVKLGDVATVELGAEKYD
                     YLSRFNGNPASGLGVKLASGANEMATAKLVLDRLNELAQYFPHGLEYKIAYETTSFVK
                     ASIIDVVKTLLEAIALVFLVMYLFLQNFRATLIPTIAVPVVLMGTFSVLYAFGYSINT
                     LTMFAMVLAIGLLVDDAIVVVENVERIMSEEGLTPREATRKSMGQIQGALVGIAMVLS
                     AVFVPMAFFGGTTGAIYRQFSITIVSAMVLSVLVAMILTPALCATLLKPLHKGEQHGQ
                     RGFFGWFNRTFNRNAERYEKGVAKILHRSLRWILIYVLLLGGMVFLFLRLPTSFLPQE
                     DRGMFTTSIQLPSGSTQQQTLKVVEKVENYYFTHEKNNIMSVFSTVGSGPGGNGQNVA
                     RMFVRLKDWDARDPTTGSSFAIIERATKAFNQIKEARVFASSPPAISGLGSSAGFDME
                     LQDHAGAGHDALMAARDQLIELAGKNSSLTRVRHNGLDDSPQLQIDIDQRKAQALGVS
                     IDDINDTLQTAWGSSYVNDFMDRGRVKKVYVQAAAKYRMLPDDINLWYVRNKDGGMVP
                     FSAFATSRWETGSPRLERYNGYSAVEIVGEAAPGVSTGTAMDVMESLVHQLPGGFGLE
                     WTAMSYQERLSGAQAPALYAISLLVVFLCLAALYESWSVPFSVMLVVPLGVIGALLAT
                     WMRGLENDVYFQVGLLTVIGLSAKNAILIVEFANEMNQKGHALLDATLYASRQRLRPI
                     LMTSLAFIFGVLPMATSTGAGSGSQHAVGTGVMGGMISATILAIFFVPLFFVLIRRRF
                     PLKPRPE"
     gene            complement(5820..7520)
                     /gene="narQ"
                     /locus_tag="MOX77_002484"
     CDS             complement(5820..7520)
                     /gene="narQ"
                     /locus_tag="MOX77_002484"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite two-component system sensor
                     histidine kinase NarQ"
                     /protein_id="HCA3357987.1"
                     /translation="MTVKRPVSASLAKAFFYIVLLSILSTGSALLTLTSSLRDAEAIN
                     IAGSLRMQSYRLGYDLQSRSPQINAHRQLFQHALNSPVLQNLNAWYVPQAVKTRYARL
                     HANWLEMNSRLQDGDIVWYQSNINNYVDQIDLFVLALQHYAERKVMLVVAISLAGGIG
                     IFTLVFFTLRRIRQQVVRPLNQLVTASQRIEHGQFAPLPLDTSLPNELGLLAKTFSQM
                     SSELHKLYRSLEASVEEKTHDLHEAHRRLEVLYQCSQALNTSQIDVHCFRHILQIVRE
                     HDAAWYLELTVGDNWRISEGTQSPDLPMQMLPVTMQDTVYGELHWQSPNVNASTPLLN
                     SVSTMLGRGLYFNQAQKHFQQLLLMEERATIARELHDSLAQVLSYLRIQLTLLKRAIP
                     EDNAGAQSIMADFSRALNDAYRQLRELLTTFRLTLQQADLPSALHEMLEDLQSQTPAK
                     LKLDCRLPTLALDAQMQVHLLQIVREAVLNAIKHANASEIAVSCVTAPDGDHTVYIRD
                     NGIGIGEPHEPAGHYGLNIMRERAERLGGTLNFSQPSGGGTLVSISFRSSNKEESQLT
                     "
     gene            7706..9565
                     /locus_tag="MOX77_002485"
     CDS             7706..9565
                     /locus_tag="MOX77_002485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase FeS-binding subunit"
                     /protein_id="HCA3357988.1"
                     /translation="MNRFIMANSQQCLGCHACEVACVMAHNDERHVLTPQRYQPRITV
                     IKHQRQRSAVTCHHCEDAPCARSCPNGAIAHINDSVQVNAQKCIGCKSCVVACPFGTM
                     QMVLTPVAPNQFKASAHKCDLCQGREQGPACVENCPADALQLVTEDSLTRLAKTRRLR
                     TARQEIRPWHTVDTQHSGTACSKVERMQATPPRGEPDKLAIEARKTTFEEIYLPFRAA
                     QAEREAARCLTCGEHSICEWTCPLHNHIPQWIELVKAGDIDAAVELSHQTNCLPEITG
                     RVCPQDRLCEGACTLRDEYGAVTIGNIERYISDRALSKGWRPDLSDVQKSDKRVAIIG
                     AGPAGLACADVLARRREIFSAMGIRFELNCEVGKDISLETLLESYDAVFVGVGTYRSM
                     KADLPNEDAPGVYDALPFLIANTKQVMGLPALPDEPFIDTAGLNVVVLGGGDTAMDCV
                     RTALRHGAANVTCAYRRDEANMPGSKKEVKNAREEGANFEFNVQPVELVLDTHGRASG
                     IRFLRTRLGEPDGQGRRRPVPVPDSEFVMPADAVIMAFGFHPHGMSWLESHGVKVDNW
                     GRIAASVESEFRYQTSNPKIFAGGDAVRGADLVVTAMAEGRHAAQGILDWLAK"
     gene            complement(10014..11312)
                     /gene="pbp4b"
                     /locus_tag="MOX77_002486"
     CDS             complement(10014..11312)
                     /gene="pbp4b"
                     /locus_tag="MOX77_002486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin binding protein PBP4B"
                     /protein_id="HCA3357989.1"
                     /translation="MKFTLVATVLLTFSLSAFAVEYPVLTTASPDQVGFDSQKLHRLD
                     GWIQNQIDAGYPSINLLVIKDNHIVLQKAWGYAKKYDGSTLLAHPIRATTNTMYDLAS
                     NTKMYATNFALQKLVYEGKIDVNDLVSKYIPGFKDMPGDKIKGKDKLRIIDILHHVAG
                     FPADPQYPNKNVAGKLFSQSKSTTLEMIKKTPLEYQPGSKHIYSDVDYMILGFIIESI
                     TAMPLDRYVETTIYKPLGLKHTVFNPLMKGFTPPQIAATELHGNTRDGVIHFPNIRTN
                     TLWGQVHDEKAWYSMGGVSGHAGLFSDTHDMAVLMQVMLNGGGYGNVKLFDNKTVAQF
                     TRRSPEDATFGLGWRVNGNASMTPTFGVLASPQTYGHTGWTGTLTSIDPVNHMAIVIL
                     GNRPHSPVANPKVNPNVFVSGLLPAATYGWIVDQIYGSLK"
     gene            11516..12091
                     /gene="nudK"
                     /locus_tag="MOX77_002487"
     CDS             11516..12091
                     /gene="nudK"
                     /locus_tag="MOX77_002487"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose pyrophosphatase NudK"
                     /protein_id="HCA3357990.1"
                     /translation="MSQTITLIKDKILSDNYFTLRNITYDLTRRNGEVIRHKREVYDR
                     GNGATILLYNSTKKTVVLVRQFRVATWVNGNQDGMLIETCAGLLDNDEPEVCIRKEAI
                     EETGYDVGEVRKIFELYMSPGGVTELIHFFIAEYHDSERASIGGGVEDEEIEVLELPF
                     SRALEMVRSGEIRDGKTVLLLNYLQTSHLMD"
     gene            12216..13259
                     /locus_tag="MOX77_002488"
     CDS             12216..13259
                     /locus_tag="MOX77_002488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1176 domain-containing protein"
                     /protein_id="HCA3357991.1"
                     /translation="MRYRVILFCLFGLLPVQLLWAAPAQRTFSDWQVTCNNQNFCVAR
                     NTGEHHGLVMTLSRSAGARTDAVLRIDRGGLAPPDAKEAAIAPRLLLDGKPLSFNSSH
                     WRVSPWHLMTGDPATITAFLQTIQDAQAITLKNGVQTLSLAGLKAALLFIDAQQKRVG
                     SETAWIEKGNEPPLSVPPAPALKGIAVINPTPVPLSEEERDDLLDYAAWRVNGIRCSL
                     DPLRRETQVSALTDDKALLIVNCEAGAYNTIDLAWVVSRKKTLVSRAVRLRLPFNRGV
                     ESNDMELMNAFFDEKTRELVTLAKGRGLTDCGIQTRWRYDGDRFRLVRYAEEPSCDSW
                     HGPDAWPTLWITR"
     gene            13387..13617
                     /locus_tag="MOX77_002489"
     CDS             13387..13617
                     /locus_tag="MOX77_002489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357992.1"
                     /translation="MKINNGPVLCPHCGCLSAYYEIDRLAAIREKVNKEGGSAAWDST
                     LQAHKKKAFCLMCHKSIDEVVIGQSDAPESTK"
     gene            complement(13680..15680)
                     /gene="tkt"
                     /locus_tag="MOX77_002490"
     CDS             complement(13680..15680)
                     /gene="tkt"
                     /locus_tag="MOX77_002490"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HCA3357993.1"
                     /translation="MSRKDLANAIRALSMDAVQKANSGHPGAPMGMADIAEVLWNDFL
                     KHNPTDPTWYDRDRFILSNSHASMLLYSLLHLTGYDLPLEELKNFRQLHSKTPGHPEI
                     GYTPGVETTTGPLGQGLANAVGLAIAERTLGAQFNRPDHEIVDHYTYVFMGDGCLMEG
                     ISHEVCSLAGTLGLGKLIGFYDHNGISIDGETEGWFTDDTAKRFEAYHWHVVHDIDGH
                     APEAVKKAILEAQSVKDKPSLIICRTVIGFGSPNKAGKEESHGAALGEEEVALTRQKL
                     GWHHPAFEIPKEIYRAWDGREKGEKAQQQWQEKFAAYEKAYPELAAEFTRRMSGGLPE
                     AWESATQKFINDLQANPAKIATRKASQNTLNAYGPLLPELLGGSADLAPSNLTIWKGL
                     TSLKEDPAGNYIHYGVREFGMTAIANGIAHHGGFVPYTATFLMFVEYARNAARMAALM
                     KARQIMVYTHDSIGLGEDGPTHQAMEQLASLRLTPNFSTWRPCDQVEAAVGWKLAIER
                     QHGPTALILSRQNLAQVERTPEQVKAIARGGYILKDSGGKPDIILIATGSEMEITLQA
                     AEKLTGEGHNVRVVSLPSTDIFDAQDEAYRESVLPAHVTARVAVEAGIADYWYKYVGL
                     KGAIIGMTGYGESAPADKLFPYFGFTVENIVEKARRVLNIKG"
     gene            complement(15700..16650)
                     /gene="tal"
                     /locus_tag="MOX77_002491"
     CDS             complement(15700..16650)
                     /gene="tal"
                     /locus_tag="MOX77_002491"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HCA3357994.1"
                     /translation="MNQLDGIKQFTTVVADSGDIESIRHYQPQDATTNPSLLLKAAGL
                     EQYGHLIEDAIAWGKKHGGTQEQQVAAASDKLAVNFGAEILKSIPGRVSTEVDVRLSF
                     DKEKSIEKARHLVDLYQQQDVDKSRILIKLAATWEGIRAAEQLEKEGINCNLTLLFSF
                     AQARACAEAGVYLISPFVGRIYDWYQARSPLEPYVVEEDPGVKSVRNIYDYFKQHRYE
                     TIVMGASFRRTEQILALTGCDRLTISPNLLKELKEKEEPVIRKLVPSSQMFHRPTPMT
                     EAEFRWEHNQDAMAVEKLSEGIRLFAVDQRKLEDLLAAKL"
     gene            16922..19201
                     /gene="maeB"
                     /locus_tag="MOX77_002492"
     CDS             16922..19201
                     /gene="maeB"
                     /locus_tag="MOX77_002492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent oxaloacetate-decarboxylating
                     malate dehydrogenase"
                     /protein_id="HCA3357995.1"
                     /translation="MDEQLKQSALDFHEFPVPGKIQVSPTKPLATQRDLALAYSPGVA
                     APCLEIEKDPLAAYKYTARGNLVAVISNGTAVLGLGNIGALAGKPVMEGKGVLFKKFA
                     GIDVFDIEVDELDPDKFINVVAALEPTFGGINLEDIKAPECFYIEQKLRERMNIPVFH
                     DDQHGTAIISTAAILNGLRVVEKNISDVRMVVSGAGAAAIACMNLLVALGMQKHNIVV
                     CDSKGVIYKGREPNMAETKAAYAVDDSGKRTLDEVIDGADIFLGCSGPKVLTQEMVKK
                     MARAPMILALANPEPEILPPLAKEVRPDAIICTGRSDYPNQVNNVLCFPFIFRGALDV
                     GATAINEEMKLAAVRAIAELAHAEQSEVVASAYGDQDLSFGPEYIIPKPFDPRLIVKI
                     APAVAKAAMDSGVATRPIADFDAYIDKLTEFVYKTNLFMKPIFSQARKDPKRVVLPEG
                     EEARVLHATQELITLGLAKPILIGRPSVIEMRIQKLGLQIKAGVDFEIVNNESDPRFK
                     EYWSEYYQIMKRRGVTQEQAQRAMIGNHTAIGAIMVQRGEADAMICGTIGDYHEHFSV
                     VKAVFGYRDGVHTAGAMNALLLPSGNTFIADTYVNEDPTPEQLAEIAVMAAETVRRFG
                     IEPKVALLSHSNFGSSNSLSASKMRETLERVRERAPDLMIDGEMHGDAALVESIRNDR
                     MPDSPLKGAANILVMPNMEAARISYNLLRVSSSEGVTVGPVLMGVSKPVHVLTPIASV
                     RRIVNMVALAVVEAQTTPL"
BASE COUNT         4506 a         5035 c         5237 g         4477 t
ORIGIN      
        1 ggcgctgaga gggcggctgg aggaaaaagc cagcgatgcc gaactgtgcg cccggctacg
       61 catttcaggc cgtaaagctc tgctggcgtt gcagcgtgcg caggcggcgc aggcgctaat
      121 tgcgttggat gccggacgaa cgcagcgttt gcgcgacgta atgccaggcg gtggggacca
      181 tgccggatag cgatacctgt ccggcatgtt atccggttac tttttcggct gatctttctt
      241 cggccagtcg tcttcatcgt cccacttatc gttaaaatcg cgatgcgggg gcagctcagg
      301 tttgttggca aggaatttct tatggtcgat gcgtttgaga tctttgatca cattcagcag
      361 tacgcctacc agaaacacca ataccagaat ccaccaatat tttgccagcc agtccatgct
      421 tatttcctct taccggaacg ctcatcaggc gacgagctgt tccataatac gttgatacat
      481 acgggccagt agctggagat cggcggcatt cacacattcg ttaattttat gaatggtggc
      541 gttcaccggc cccagttcta ccacctgcgc tcccatacgg gcgataaaac gtccgtcgga
      601 cgtaccgccc gtcgtcagta attgcggttt aatttcatta tagtgctcaa tggcgtttac
      661 caccgcgtcc accagctttc cgcgtgcggt caggaacggc tgaccggaaa gccaccagtc
      721 tacggtatag cgtagctgat gcttctcaag cagcgcatgt acccgttctt tgatcatctc
      781 atcggtcagc tccgtgctaa aacggaagtt aaactgcacg aacagttcgc cgggaatgac
      841 attattgctg ccggtgcctg cctggatatt ggctatctgc atactggtgg ccgggaaaaa
      901 gtcattgccc cgatcccact cgatagcgac cagttcattg agaaaaggcg cggcgcgatg
      961 aacagggtta tccgccagat gcggataggc aacgtgcccc tgaacgccat gaatagtgag
     1021 gttacaggtg agggaaccgc gacgcccgtt tttgacgaca tcgcccacaa tttcagtact
     1081 ggaaggttcg ccgaccagac agtaatccag ccgctcgtta cgggccatca gcgcttcaac
     1141 cacctttacg gtgccatttt ttgcgctggc ttcttcatca gaggtaatca aaaatgcgag
     1201 gcggccccgg tgatgaggat gctgtgcaac aaaacgttca gcagccacca ccatggccgc
     1261 cagtgaacct ttcatatccg ccgcgccgcg accgaacaac attccgtcgc gaatcgtagg
     1321 ttcaaacggc ggattgatcc agcgatcgac atcgccagcc ggtacgacgt cagtatgccc
     1381 ggcgaacgcc agcgtttcgc cacgcccacg ccatgcccaa aaattttgcg tgtcgccaaa
     1441 atccatatgc tcaatggtaa aaccgatttt acgcaggcgt tcaatcatta atgcctgaca
     1501 gcctacgtca tccggactca gggaggggcg acgaataagt tgctgtgtca gctcaataac
     1561 cgggcacgac atagactaca cctcatcaaa aaactgctga taacgggatt cactgaaacc
     1621 aagcagcata ggcttcccgg gcgcgcagag caatgggcgt ttgatgattg ccggctgttc
     1681 aaccatgaga gcagcggcgg agtcggcatc ggtaatcccg ctgcggtggc cttcatccag
     1741 tttgcgccat gttgtgccgc gcgtattcag taaaggctgc cagccgagtt cggcaataaa
     1801 ggtattaaga agagggaggt ctatgccatc cacacggtaa tcgtgaaaac gataatcaat
     1861 gccatgctcc tccagccaac ggcgcgcttt tttgatcgtg tcgcaattct taatgccata
     1921 gagggtaatc atattgaatc ctttaacgcg aaattcgaat aaataatcaa tagtatcgtc
     1981 tgcgggataa taagtgtggc tgttaatggt tatttatcca gcgctgatcg gcaatcaata
     2041 taacattgtt gagtgaatgt gaataatgat tccaaaacgt tccagatgtg gcttgtttat
     2101 aattcgtgag gaaaatccta ttttgcgcac atgcaattga ttgtttttta acccgatttg
     2161 ataaagtagt agaaaaggta ttaatgttgc taaatattgc agtaagtcac ataaaattta
     2221 cggctacagc gccatagtaa tatcatagac agcataacca gaggatatcg caacaatcgg
     2281 ttaaatgaac ttctctctat accgctaact acgtagaata cccataataa taagagaggc
     2341 tattatgatt gaacgtgaac tggggaactg gggaactggg gaactggaaa gattttatcg
     2401 aagtcatgct tcgtaaataa atgcctggaa ggcaccgcgc tcccataggg gataagaaaa
     2461 ggcgactcaa cgaaagtcgc cttttttgtg cccgacacct cgtatcaggc tggccaggag
     2521 cttattccgg gcgcggcttc agcgggaagc ggcgacgtat cagcacgaaa aacaggggta
     2581 caaagaagat agccagaatg gttgctgaga tcattccccc catcacgccg gttccgacag
     2641 catgttggct acccgagcct gccccggtgc tggtggccat cggcaatacg ccaaagataa
     2701 acgccagcga agtcatcagt atcggtcgca ggcgctggcg gctggcgtac agcgtggcgt
     2761 ctaacagcgc gtgtcccttc tgattcattt cgttggcgaa ttccacaatc agaatcgcgt
     2821 ttttcgccga gaggccgata acggtcaaca gccccacctg gaagtaaaca tcgttttcca
     2881 gcccgcgcat ccaggtggcg agtaacgcgc cgatgacccc gagcggcaca accagcatca
     2941 ccgagaaggg caccgaccag ctttcataca atgccgccag acacaggaag acgactaata
     3001 gcgaaatagc gtacagcgca ggcgcctgcg cgccggagag ccgttcctgg taagacatgg
     3061 ctgtccattc caggccaaaa ccgcccggta gctgatgcac caacgactcc atgacatcca
     3121 tcgccgtccc ggtactgacc cccggcgcgg cctctccgac aatttctacc gccgaatagc
     3181 cgttatagcg ttccagacgc ggcgatccgg tttcccagcg cgaggtggcg aaggcggaga
     3241 aggggaccat gccgccgtct ttgttacgga cataccaaag attaatatcg tccggcaaca
     3301 tacgatattt cgctgcggcc tgaacataga ccttcttcac gcggccccgg tccataaagt
     3361 cgttgacgta gctcgatccc caggctgttt gcagggtgtc gttgatatcg tcaatcgata
     3421 cgcccagcgc ctgcgctttc cgttggtcaa tatcaatttg cagttgcggg ctgtcgtcca
     3481 ggccgttgtg gcgcacgcgg gtcaaggaac tgtttttccc ggccagctca atgagttgat
     3541 ctcgtgcggc catcagcgcg tcatggcctg ctccggcgtg atcctgtaat tccatatcaa
     3601 aaccggcgga gctgcccaga ccgctaattg ccggcgggct gctggcgaag acgcgagctt
     3661 ctttaatctg gttaaatgct tttgtcgccc gctcaataat ggcgaacgag gagccggtgg
     3721 tgggatcgcg cgcgtcccag tctttcaagc gaacaaacat acgcgcgacg ttttgcccgt
     3781 tcccgccagg gccggaaccg accgtcgaga agaccgacat aatgttgttt ttctcatggg
     3841 tgaagtaata gttttcaacc ttttcaacga ctttcagggt ctgctgttgc gtagagccgc
     3901 tcggtagctg gatagacgta gtgaacatgc cccgatcttc ttgcggcaga aaggaggtgg
     3961 ggagacgcaa aaacaggaac accatgccgc caagcaacag aacataaatc agaatccagc
     4021 gcaggctgcg atgcaaaatt ttcgctacgc ctttctcata acgttcggca ttacgattga
     4081 aggtacggtt aaaccagccg aaaaatccgc gttgcccgtg ctgttcgcct ttgtgcagcg
     4141 gttttaataa cgttgcgcac agcgccggcg tcaggatcat ggcgaccagc accgacagca
     4201 ccattgccga gacaatggtg atagaaaact gacgataaat cgccccggtg gtaccgccaa
     4261 agaacgccat cggtacgaat accgcagaca gcaccatcgc gataccgacc agcgccccct
     4321 ggatttgtcc catggatttg cgcgtcgctt cacgcggcgt gagcccttct tcgctcatga
     4381 tacgttcgac gttttccacc accacgatgg catcgtcgac caggagcccg atcgccagca
     4441 ccatcgcgaa catggttaat gtgttaatac tgtagccgaa cgcgtaaagc acggagaagg
     4501 tgcccattaa tactactggc acggcgatcg tcggaatgag cgtggcgcga aagttttgca
     4561 ggaacagata catcaccagg aaaaccagcg cgatagcttc cagcaacgtt ttgaccacat
     4621 cgataatcga ggctttgaca aaggaggtgg tttcatacgc gatcttgtat tccaggccgt
     4681 gagggaagta ctgcgccagc tcgttgaggc gatccagtac cagcttcgcg gtcgccattt
     4741 cgttcgcgcc ggaggccagc ttaacgccaa ggccggaagc cggattgccg ttaaaacggc
     4801 tgaggtagtc atatttttcc gcccccagct ccacggtggc gacatcgccc agtttgacct
     4861 cggaaccgtc ctgattaacg cgcagggtga tatcgcgaaa ttgttgcggc gtttgcagca
     4921 gcgactgcgc attgatggtg gcgttcagcg cctgcttgtc gaccgaaggc gtaccgccaa
     4981 gctgcccgac ggcgatttgc gcattctgcg actcaatcgc atcggtcacg tctttcgtgg
     5041 tcatctgaaa actattcaat ttggccggat cgagccagat acgcatagag tactgtgaac
     5101 cataagcgtc aatatcgccc acgccgttga cgcggctgag cgggtcctga atattactgg
     5161 cgacgtagtc ggcgatatcc tgcttgtcca tagaaccgtc ggtagagacg aaagcgatgg
     5221 tcaaaatatt ggtatcgccc gttttgcgta ccgtgacgcc ttgatcctgt accgcctgcg
     5281 gcagtttacg catcgcggac tgtaactggt tttgcacctg ctgaaccgcc tcatcaggat
     5341 cggttcccgc aatgaagctc agcgtaatgg tcgcctgtcc ggttccgctg ctttgtgatg
     5401 acatgtacat cagattatcg aggcccgtca tattctgctc aataacctgg gttacggtat
     5461 tttccagcgt ttgcgccgac gctcccggat aattcgcggt aatacgtacg ttgggcggcg
     5521 ccagatcggg atattgttca acaggtaaag aaaaaatggc taacgcccct gtcagacaca
     5581 acaggatagc cagcacccag gcaaaaatgg ggcgatcgat aaaaaaattc gccattaaag
     5641 gggaacctcg tgtttctaca tatcgttata gatttgaact gcttcactgt agcggcaagc
     5701 tacgagccaa acgtggagaa ataaaggaga taatgtaaat tatcatgcgc ttttacagca
     5761 tactttttgt gccaacgccg gaaagcctga catctggcct tccggtgatt tgccgttctt
     5821 tacgttaact gactctcttc cttgttggag gagcgaaaac tgatactgac cagcgtgccg
     5881 ccgccggagg gttgcgaaaa attcagcgtg ccgccaagcc gttccgcgcg ctcacgcatt
     5941 atattcagac catagtgtcc ggcaggctca tgcggttcgc cgataccaat gccattatcg
     6001 cgaatataaa cggtatgatc gccgtcaggc gcggtgacgc agctcacggc gatttcgctc
     6061 gcgttggcgt gtttaatggc gttcaggaca gcttcacgca caatttgcaa taaatgcacc
     6121 tgcatttgcg catccagcgc cagcgtgggt aaacggcaat ccaacttgag tttagccgga
     6181 gtctgactct gtaaatcttc cagcatctca tgcaatgcgg agggtaaatc ggcctgctgt
     6241 aacgtcagac ggaacgtggt gagtagctcg cgaagctgac ggtaggcgtc gttcagcgct
     6301 ctggaaaaat ccgccatgat gctttgcgcg ccggcgttat cttctggaat ggcgcgcttc
     6361 aaaagcgtta attgaatacg taaataagaa agtacctgcg ccagcgaatc gtgtaactca
     6421 cgggcaatcg tcgcgcgctc ttccattaac aaaagttgct ggaagtgttt ttgcgcctga
     6481 ttaaagtaca aaccacgccc cagcatcgtg gagacgctgt tcagcaacgg cgtagaggca
     6541 ttaacgttgg ggctttgcca gtggagttcg ccatagaccg tgtcctgcat cgtcactggc
     6601 agcatttgca tcggcaggtc ggggctttgc gtgccttcgc taatccgcca gttatcgccc
     6661 acggttaact ccagatacca ggcggcgtca tgttcacgga caatttgcaa aatatggcga
     6721 aaacagtgga catcgatttg gctggtattc agcgcctggg agcactggta taacacctcc
     6781 aggcggcggt gcgcttcgtg cagatcgtgc gttttttctt ccaccgaggc ttccagcgaa
     6841 cgataaagtt tatgcagctc gctcgacatc tgactaaacg ttttcgccaa caatcccagc
     6901 tcattgggta agctggtatc cagcggcagc ggggcgaact gaccatgttc aattcgctga
     6961 ctggcggtga ccagttgatt cagcgggcga acgacctgct ggcgaatacg ccgtagggta
     7021 aaaaagacca gcgtaaatat gccgataccg cccgccagcg atatggcgac gaccagcatg
     7081 actttacgct cggcgtaatg ctgtaacgcc agaacgaaga gatcaatttg atcgacgtaa
     7141 ttgttgatat tggactgata ccagacaatg tcgccatcct gtaggcggct attcatctcc
     7201 agccagttgg cgtgcaggcg cgcgtagcga gttttcaccg cctgcggcac ataccaggcg
     7261 ttgagatttt gcagtaccgg cgagttgagc gcgtgctgga aaagttgacg atgcgcatta
     7321 atctgcgggc tacggctttg cagatcgtaa cccagccgat agctctgcat tcgtagcgaa
     7381 ccggcgatat tgatcgcttc ggcatcccgt aaactgctgg tcagcgtcag taatgcgctg
     7441 ccggtggaca gaatagacaa cagcacaata tagaaaaaag ccttagccag actggccgag
     7501 accgggcgtt taaccgtcac actggtactc cccgcattta gctgaaccgc aatttcattt
     7561 gctttgaaat aaattgatct gccacaggtt ctggacagat agttgtgctt cctgggcaga
     7621 tgaacattgc cgaccccgcc ttcgtcagtt aataacaatg ctcatataaa gaataaggtt
     7681 tttgcaacca aaacagaagg acgccatgaa tcgttttatt atggccaata gccagcagtg
     7741 tctgggatgc catgcctgcg aggtcgcctg cgtaatggct cacaatgatg agcgacatgt
     7801 tctgacgcca cagcgctatc agccccgaat tactgtcatc aaacatcagc gccagcgcag
     7861 cgcggttaca tgtcaccatt gcgaagatgc gccctgcgcc cgtagctgtc cgaacggcgc
     7921 gatcgcgcat attaacgaca gcgtgcaggt caatgcgcag aagtgcatcg gctgtaagtc
     7981 ctgcgtcgtc gcctgcccat tcggcaccat gcagatggta ttgacgcccg tcgcgccaaa
     8041 ccagttcaaa gccagcgcgc ataaatgcga tctgtgtcag ggacgtgaac agggtccggc
     8101 ctgtgtggaa aattgcccgg cggatgcgct gcaactggtc accgaagact cgttgacccg
     8161 tctggctaaa acgcgacggc tgcgtaccgc ccggcaggag attcgcccct ggcataccgt
     8221 ggatacacaa cacagtggga cagcatgcag caaagtcgag cgtatgcagg cgacgccgcc
     8281 gcgcggcgaa ccggataaac tggcgattga agcgcgtaaa accacctttg aggaaattta
     8341 tctgccgttt cgcgccgcgc aggcggagcg tgaagcggcc cgctgcctca catgcgggga
     8401 acacagtatc tgcgaatgga cctgtccgct gcataaccat attccccagt ggatcgaact
     8461 ggtgaaagcc ggcgatattg atgcggcggt agagctttcc caccagacca actgtctgcc
     8521 ggaaattacc gggcgcgtct gtccgcagga tcggctatgc gaaggcgcgt gtacactccg
     8581 cgatgagtat ggcgcggtta ccatcggcaa cattgagcgc tatatctccg atcgcgctct
     8641 gagcaaaggc tggcgtcccg acctgtcgga cgtacagaag agcgataagc gcgtggcgat
     8701 tatcggcgcg gggccggcag gtcttgcctg cgctgacgtg ctggcgcgcc gtcgggaaat
     8761 cttcagcgcg atggggattc gtttcgaact taactgcgaa gtagggaaag atatttctct
     8821 ggagacgctg ctggagagtt atgacgccgt ctttgtcggg gtaggaacct atcgttccat
     8881 gaaggctgat ttaccgaatg aagacgcgcc gggggtatat gatgcgttgc cattcctcat
     8941 cgccaatacc aaacaggtga tggggcttcc ggcgttgcct gacgagccgt ttattgatac
     9001 tgcgggcctt aacgtggttg tgctgggcgg cggtgacacc gcaatggact gcgtacgtac
     9061 ggcgttgcgt catggcgctg ccaacgtcac ctgcgcttat cgccgcgatg aggccaatat
     9121 gccagggtcg aaaaaagagg tgaaaaacgc gcgggaagag ggcgcgaact ttgaatttaa
     9181 cgttcagcca gttgagttgg tgctggatac gcacgggcgc gccagcggta ttcgcttttt
     9241 gcgtacgcgg cttggcgaac cggatggtca ggggcgacgc cgtccggtac ctgtaccgga
     9301 cagcgagttc gtgatgccgg cggatgcggt cattatggcg tttggttttc atccgcatgg
     9361 tatgtcgtgg ctggaatcgc atggcgtgaa ggtggataac tggggacgta ttgccgccag
     9421 cgtcgagagc gagtttcgtt accagacgtc caacccgaaa attttcgctg gcggcgatgc
     9481 ggtgcgcggc gccgatctgg tggtgacggc gatggcagaa ggccgacatg ccgcgcaggg
     9541 gatactcgac tggttagcta aataagcgta tttgtaggcc ggttaaggcc tggaacggtt
     9601 aaatgattta gtgataaaaa atcttaaact tattggctaa ccttactccg tttgcagaaa
     9661 tgttgacgct cgcagggctg gacgccctgc gataaacatt ttcccgctgg gtcgatgttt
     9721 aacaggcctg ataaggtcaa tcttagtatt gaaaatagag tgtaaattga aggaagggac
     9781 gctatcagaa tcccttctta gagcctatcc cattagggct attttacgtg ccattttgga
     9841 cctgggcagt gctcgccaaa acgcgttagc gttttgaacg ccgcttgcgg cggcccgaag
     9901 gacgagcgta gcgagtcaaa cctcacgtac tacgtgtacg ctccggtttt tgcgcgctgt
     9961 ccgtgtccaa actggctgcg ccaataacgt ctggtgggat aggctcttaa tttttatttt
    10021 aaggaaccat atatctggtc aacaatccag ccatacgtcg ccgcaggtaa taatccactg
    10081 acaaaaacat tcgggttcac tttaggattt gctaccggcg agtgcggcct gttacctaaa
    10141 ataacaatcg ccatatgatt aaccggatcg atagacgtca gcgttccggt ccatccggta
    10201 tgtccatacg tttgcggact ggctaatacc ccgaacgttg gggtcattga ggcgttgccg
    10261 ttaacgcgcc accccagacc aaaggtagca tcttctggcg agcggcgagt aaactgcgca
    10321 accgttttgt tgtcgaatag cttcacgtta ccgtagccgc ccccattgag catgacttgc
    10381 attaacacag ccatatcatg ggtgtcagaa aacagtccgg cgtgtcctga aacgccgccc
    10441 attgagtacc aggctttttc gtcatgcacc tggccccata gtgtattggt gcgaatattg
    10501 gggaaatgaa tcacgccgtc acgcgtgttg ccgtgtagtt ccgttgcggc gatttgcggc
    10561 ggcgtgaagc ctttcatcag cgggttaaag acggtatgtt ttaatccgag cggtttataa
    10621 atggtggttt cgacgtagcg atctaatggc attgccgtta tcgattcaat gataaaacca
    10681 agaatcatat aatccacgtc gctgtagata tgcttcgacc caggttgata ttccagcggt
    10741 gtctttttaa tcatctccag agtagtgctt ttactctgtg aaaataattt accggcgacg
    10801 tttttattgg gatattgtgg gtcggcagga aagcccgcga cgtgatgaag aatatcaata
    10861 atgcggagtt tatctttgcc ttttatttta tccccaggca tatccttaaa gccggggata
    10921 tattttgata ccaaatcatt gacatctatt tttccttcat acaccagttt ttgcaatgca
    10981 aagttagtgg catacatttt tgtgtttgaa gccaggtcat acatcgtgtt agtggtcgcc
    11041 cgaatgggat gggctaacag cgtggaaccg tcatattttt tggcatagcc ccaggctttt
    11101 tgtagaacaa tatgattatc ttttatcacc agaagattga tgctgggata tccggcatca
    11161 atttgatttt gaatccagcc atcaagtcgg tgaagttttt ggctatcaaa ccccacctga
    11221 tcagggctcg cggtggtcaa taccggatac tcaacggcaa aagctgaaag ggaaaacgtc
    11281 agtagaaccg tcgcaacgag agtaaatttc atgatgattc cctcagtctc actccggccg
    11341 tcaaatcata tcgcgagcat ggactctgcg gcccggagaa gcagaatgtg gtcatggcag
    11401 tgacagaaaa atatggctgt acatccgttc agtcggcatt aaggattaac ccttcagcag
    11461 acaaaaccga cctcacggcg taatattaat gctcttttta caccctggag ccagcatgtc
    11521 gcaaaccatt acgcttatta aggataaaat tctttctgat aattatttta ctctgcgcaa
    11581 cattacctat gacctgaccc gtcgtaatgg cgaggttatc cgtcacaagc gtgaggttta
    11641 cgatcgcggg aatggcgcaa ccattctgct ttacaactca actaaaaaaa ccgtggttct
    11701 ggttcgccag tttcgcgtgg cgacatgggt caatggtaat caagacggta tgttaattga
    11761 aacctgcgct ggcctgcttg ataacgacga gccggaggtc tgtatccgta aagaggccat
    11821 tgaagagaca gggtatgacg ttggtgaggt acgcaagata tttgagctgt atatgtcgcc
    11881 aggcggcgtc acggagctga ttcatttctt cattgccgaa tatcatgata gcgagcgtgc
    11941 cagcatcggc ggcggcgtgg aggacgaaga gattgaggtg cttgaactac cgttttcccg
    12001 ggcgctggaa atggtgcgct caggcgagat tcgggacggt aagaccgtgt tattgcttaa
    12061 ctatttacag acgtctcatc taatggactg aaaaaaaaga aatatatttc tttacacaaa
    12121 aaagaccaat ccgataaatc tgattgagaa ccctgaggcg cgcaaggaag ataccgcctg
    12181 agctgtgttg ttctgaatct ggggttgttc cgttcatgcg ctaccgcgtt attctttttt
    12241 gtctgtttgg cctgttgccg gtccagctac tgtgggctgc gccagcgcaa cggacttttt
    12301 ccgactggca ggtcacctgc aataaccaaa atttttgcgt agcgcgcaat actggcgaac
    12361 atcatgggct ggtgatgaca ttaagccgca gcgccggggc gcgtaccgat gcggtactgc
    12421 gtatcgaccg cggcggtttg gcgccgcccg acgctaaaga agccgcaatt gcgcctcgct
    12481 tattgctgga tggcaaaccg ctttcgttca acagttcaca ctggcgcgtg tcgccctggc
    12541 atctcatgac cggcgatcct gccaccatca ccgcattttt acagacgatt caggatgcgc
    12601 aggccatcac cttaaaaaac ggcgttcaga cgctttcgct ggcgggatta aaagcggcat
    12661 tactgtttat cgacgcgcaa caaaaacgtg tgggcagcga aaccgcctgg attgaaaaag
    12721 gaaacgaacc gccgctcagc gtgcccccgg caccggcatt aaaggggatc gccgttatta
    12781 atccaacgcc cgtaccgctg agtgaggaag aacgcgacga tctgctggac tacgccgcat
    12841 ggcgggtaaa cggcattcgt tgttcgcttg acccgctgcg tcgcgagacg caggtcagcg
    12901 cgttgacgga tgataaagcg ttattgattg ttaactgcga agccggcgcc tataacacta
    12961 ttgatctcgc ctgggtagtt tcacgcaaaa aaacgctcgt ctcgcgcgcc gtacgtttgc
    13021 ggctgccgtt taatcgcggc gtcgaaagta atgacatgga gttgatgaac gccttctttg
    13081 acgagaaaac gcgcgagctg gtgacgttgg cgaaagggcg ggggttaacc gactgtggta
    13141 tccagacgcg ctggcgctat gatggcgatc gttttcgtct ggtacgttat gccgaagaac
    13201 cgagctgcga tagctggcac gggccggatg cctggcctac gctgtggatc acgcgttgaa
    13261 tcctggttgt tatccccttt tcagaatagg gatacaccta ttgaggtttc atttatggta
    13321 tagagattgc tacgttacgg taggattgtt actttacccg atagcctcac cacagcagga
    13381 aatagtatga aaataaataa tggccccgta ttatgccccc attgtggctg cctgagcgct
    13441 tattatgaaa tagatcggct ggcggcgata agagaaaaag tgaataaaga aggcggatca
    13501 gcggcgtggg attcaacatt gcaggcgcat aaaaaaaagg ccttttgcct gatgtgccat
    13561 aaatccattg atgaggtcgt catcgggcag tcagatgcgc ctgagtctac gaagtaattt
    13621 tgcacagcct acagaacagg tctgcagact gtgcaaagtc tgtgttgcta acgcccgcct
    13681 tagcctttga tgttcagcac ccggcgggct ttttccacaa tattttccac ggtaaagcca
    13741 aaatacggga acagtttgtc agccggggcg gattcaccgt atcccgtcat gccgataatt
    13801 gcgcctttta ggccaacata tttataccag tagtcggcta taccggcctc caccgcgacg
    13861 cgggcggtta cgtgcgccgg tagcactgat tcgcgatatg cctcgtcctg cgcatcgaaa
    13921 atatccgttg aaggcaacga caccacccga acgttatgcc cctcgccagt caatttttcc
    13981 gccgcctgga gggtaatttc catttccgat ccggtagcga tcagaatgat atccggcttg
    14041 ccgccgctat ctttcagaat ataaccgccg cgggcaatcg ctttcacctg ttccggcgtg
    14101 cgttccacct gcgccagatt ctgccgcgag agaatcaacg ccgtcggccc gtgctgacgt
    14161 tcaatggcca gcttccaacc gactgccgcc tcaacctgat cgcagggacg ccaggtgctg
    14221 aagttaggcg ttaagcgcag gctcgccagt tgttccatgg cctggtgcgt cgggccatct
    14281 tcgcccaaac cgatggagtc gtgggtatag accataatct gccgggcttt cattaaggcc
    14341 gccatacgcg ccgcgttacg cgcatattcg acaaacatca gaaacgtggc ggtatacggt
    14401 acaaagccgc cgtggtgggc gatgccgttg gcaatggcgg tcatgccgaa ttcgcgcacg
    14461 ccatagtgga tgtaattacc tgccggatcc tctttcaacg aggtcaaacc tttccagata
    14521 gtcaggttgc tcggcgccag atccgccgat ccgcccaaca gttccggcaa caggggacca
    14581 taggcattga gcgtattttg cgatgcttta cgggtggcga ttttggccgg attagcctgc
    14641 aagtcgttaa taaatttttg cgtggcggat tcccatgcct ccggcaatcc gccgctcatc
    14701 cggcgggtaa actccgcggc cagctcagga taagccttct cataagcagc aaacttttcc
    14761 tgccactgct gctgcgcttt ctcgcctttt tcacggccat cccacgcgcg gtaaatctct
    14821 tttgggatct caaacgccgg atgatgccat cccagcttct ggcgggtcag cgccacctct
    14881 tcttcgccca gcgccgcgcc gtgcgactcc tccttcccgg ctttattcgg cgagccaaaa
    14941 cctatcaccg tccgacagat aattagcgaa ggtttatctt ttacgctctg ggcttccaga
    15001 atggcttttt tcaccgcctc cggagcgtgc ccgtcaatgt catgcacgac atgccagtgg
    15061 taggcttcaa aacgtttggc tgtatcgtcg gtaaaccagc cttcggtttc gccatcaatg
    15121 gagatgccgt tgtgatcgta aaagccgatc agtttgccca gtcccagcgt accagccagc
    15181 gaacacacct catgcgagat cccctccatc agacagccgt cgcccataaa gacataggtg
    15241 tagtggtcga caatctcatg gtccggccgg ttgaactgtg cgcctaacgt acgctcggca
    15301 atcgccagcc cgacggcatt cgccagcccc tggcccagcg gcccggtggt ggtttcaacg
    15361 ccaggcgtat agccaatctc cgggtgacca ggcgttttag agtgcagttg acggaagttt
    15421 tttagctcct ccagcggcag gtcatacccg gttaaatgca gcagactata gagcagcatg
    15481 gaggcgtgac tgttggaaag gataaaacga tcacggtcat accaggtcgg atcggtgggg
    15541 ttatgtttaa gaaaatcgtt ccatagcact tcagcgatat ccgccatccc catcggcgcg
    15601 ccggggtgcc cggaattggc tttttgaacg gcatccatgc tcagcgcacg aatcgcattg
    15661 gcaaggtctt tacgggacat aaatcactcc atgcaaggtt tatagtttgg cggcaagcag
    15721 gtcttccagt ttgcgctggt caacggcgaa aaggcggata ccttccgaca gcttctctac
    15781 ggccatcgcg tcctgattat gttcccagcg gaactccgct tccgtcattg gcgtaggacg
    15841 gtggaacatc tgcgaggaag gcaccagttt acggatcacc ggttcttctt tttctttcag
    15901 ctctttaagc aggttagggg agatagtcag tcgatcgcag ccggttagcg cgaggatttg
    15961 ctcagtacgg cggaaacttg cacccatcac gatggtttca tagcgatgct gtttaaagta
    16021 atcgtagata ttgcgtaccg atttcacgcc gggatcttcc tccacgacat acggctccag
    16081 cggactacgc gcctgatacc agtcgtaaat tcggcccacg aacggagaga ttaaatagac
    16141 gcccgcttcg gcgcaggcgc gcgcctgggc aaaagagaac aacaacgtca ggttgcaatt
    16201 aatgccttct ttttcgagct gttcggcggc gcgaatacct tcccaggtcg cggcgagctt
    16261 gatcagaatg cgtgatttat caacatcctg ctgctggtag agatccacca gatggcgtgc
    16321 tttctcgata cttttttctt tatcgaacga taaccgcacg tcgacttcag tggagacgcg
    16381 accgggaata cttttcagta tttccgcgcc aaaattaacc gccagtttat cgctggctgc
    16441 cgcaacctgc tgttcctgcg taccgccgtg tttttttccc caggcaatcg catcctcaat
    16501 caaatgacca tactgctcaa gcccggcggc ttttaacagt aaagagggat ttgtcgtggc
    16561 atcctgcggc tggtagtggc ggatggactc gatgtcgccg ctgtcggcga cgacggtagt
    16621 gaattgtttg atgccgtcta gctggttcat aggaaatact ccttgaaaag taaagtgtta
    16681 gatgagtgtg ttgattcaca cttctgaaag attgatacac tacataacca aaaagcatag
    16741 cagacaggca tggtattgct ggtataagca ggtaacatgg ctgttataag ttgataacaa
    16801 actcttgcgc cgcgtcgtga tagtttgcag accttcaaag tttgtgttgc gcagtacggt
    16861 gataatgtgc ggcgcaccag gccgcgtcac tttttgaacg atacgtgaaa ggaacaacaa
    16921 aatggatgag cagttaaaac aaagcgccct tgatttccac gaatttccgg tacccggtaa
    16981 aattcaggtt tctccgacta agccccttgc cacccaacgc gatctggcgt tggcttactc
    17041 gccaggcgtg gcggcgccct gcctggaaat cgaaaaagat ccgctggcag cctacaaata
    17101 caccgcgcgc ggcaaccttg tcgcggtcat ttccaacggt acagcggtgc tggggttagg
    17161 caacatcggc gcgctggccg gcaagccggt catggaaggc aaaggcgttc tgtttaaaaa
    17221 attcgccggc atcgatgtgt ttgacattga agtcgatgag cttgatccgg acaaatttat
    17281 caatgtggtc gcagcgctgg agccgacctt tggcggcatt aacctcgaag acattaaagc
    17341 gccggaatgt ttctatattg agcagaaact gcgcgagcgc atgaacatcc cggttttcca
    17401 tgacgatcag cacggaacgg cgatcatcag tacggccgcc attcttaatg gcctgcgagt
    17461 cgtagagaaa aatatttccg acgtgcggat ggtcgtctcc ggcgcagggg cggcggcaat
    17521 cgcttgtatg aacctgctgg tcgcgttggg gatgcagaag cacaacatcg tggtgtgcga
    17581 ctctaagggc gttatttaca aaggccgtga gccgaatatg gcggagacca aagcggccta
    17641 tgcggtagac gacagcggca agcgcacgct ggatgaggtc attgacggcg cggatatttt
    17701 cctcggctgt tcaggcccga aagtgctgac tcaggagatg gtgaagaaaa tggcccgcgc
    17761 gccaatgatt ctggcgctgg ctaacccgga accggaaatt ctgccgccgc tggcgaaaga
    17821 agtgcgtccg gacgccatca tctgtaccgg tcgttccgac tatccgaacc aggtgaacaa
    17881 cgtattgtgc ttcccgttta tcttccgcgg cgcactggac gtcggcgcga cggcgatcaa
    17941 cgaagagatg aaactggcgg cggtccgtgc gattgccgag ctggcgcacg ccgaacagag
    18001 cgaagtggtg gcctcggcct atggcgatca ggacctgagc tttgggccgg aatacattat
    18061 tccgaaaccg tttgacccgc gtctgattgt caaaatcgct ccggcggtcg cgaaagcggc
    18121 aatggattcc ggcgtggcga cgcgcccgat tgctgacttt gatgcctata tcgataaact
    18181 gaccgagttt gtctacaaaa ctaacctgtt catgaagccg atcttctcgc aggcacgcaa
    18241 agatccgaag cgcgtagtgc tgccggaagg ggaagaggcg cgcgtgctgc acgcaaccca
    18301 ggagttgata accctggggc tggcgaagcc catcctgatc gggcgtccga gcgtgatcga
    18361 aatgcgtatc cagaaactgg ggttacagat caaagcgggc gttgatttcg agatcgtgaa
    18421 taatgaatcc gatccgcgct tcaaagagta ctggagcgag tattaccaga tcatgaagcg
    18481 tcgcggggta actcaggaac aggcgcagcg tgcgatgatc ggcaaccata cggccattgg
    18541 cgcgatcatg gtgcagcgtg gagaagcgga tgcgatgatc tgcggcacca tcggcgacta
    18601 ccatgagcat ttcagcgtcg tgaaagccgt ctttggctac cgtgacggcg tgcatacggc
    18661 aggggcgatg aacgccttac tgctgccaag cggcaacact tttatcgccg atacttatgt
    18721 taacgaagat cccacgccgg aacagttggc ggagatcgcc gtaatggcgg cggaaaccgt
    18781 tcgccgcttt ggtattgagc cgaaagtcgc gctgttgtcg cactctaact ttggttcctc
    18841 aaattcgctg tccgccagca aaatgcgcga aacccttgag cgggtacgcg aacgagcgcc
    18901 cgatctgatg attgacggtg agatgcacgg tgatgcggcg ttggtggaaa gtattcgtaa
    18961 tgaccggatg ccggatagtc cgctgaaggg agccgccaat attctggtga tgccgaatat
    19021 ggaagccgcc cgcattagtt acaacttact ccgcgtctcc agttccgaag gcgtcacggt
    19081 cggcccggtc ctgatgggcg tgtctaaacc ggtacatgta ttaacgccga tcgcctctgt
    19141 acgccgtatc gtgaatatgg tggcgttagc ggtagttgaa gcgcaaacca cgccgcttta
    19201 ataacgcatt actctctctt ctggcgcagg ttctcctgcg cttttttgtc tatgg
//
LOCUS       DAGWFR010000069        18864 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.070, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000069 DAGWFR010000000
VERSION     DAGWFR010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 18864)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18864)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18864
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.070"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..586)
                     /locus_tag="MOX77_002493"
     CDS             complement(<1..586)
                     /locus_tag="MOX77_002493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dimethyl sulfoxide reductase anchor subunit"
                     /protein_id="HCA3357996.1"
                     /translation="MHELPLVFFTVFTQSAVGAFILLLIGGAMGLVAPRRKAIGLFSV
                     MCLFGIGVVVGTFHVGQPLRALNMLLRVGHSPMSNEIVLSAAFVALGGLGALGLLLNR
                     ATPLCNALVWLAAIVGVVFLYAVPQIYQLPTVATWRSSYTTAMMILTPLIGGGALAAL
                     FGVRRLGLLVSVLAILVSFCLRPGYMATLMSADSA"
     gene            complement(579..1205)
                     /gene="dmsB"
                     /locus_tag="MOX77_002494"
                     /pseudo
     CDS             complement(579..1205)
                     /gene="dmsB"
                     /locus_tag="MOX77_002494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463171.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="dimethylsulfoxide reductase subunit B"
     gene            complement(1219..3653)
                     /locus_tag="MOX77_002495"
                     /pseudo
     CDS             complement(1219..3653)
                     /locus_tag="MOX77_002495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004391916.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
     gene            4002..5633
                     /gene="dcuS"
                     /locus_tag="MOX77_002496"
     CDS             4002..5633
                     /gene="dcuS"
                     /locus_tag="MOX77_002496"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     DcuS"
                     /protein_id="HCA3357997.1"
                     /translation="MKHSLPCRALRKRPMKLGTTVILMVSAVLFSVLVVVHLIYFSQI
                     SSMTRDALADKALAVARSLADSPAIREGLKKPPAESGIQPLSEAVSQHNGFLFIVVTN
                     MQGIRYSHPETQRIGQPFKGDDILLALQGKENVAINRGFLAKALRVFTPVYDEHHRQI
                     GVVAIGLELSHVTQQINNSRGSIIWSILFGALVGLLGTYALVKVLKRILFGLEPYEIS
                     TLFEQRQAMLQSIKEGVIAVDGSGEVTLINHAAQALLDYRKTQDDARLSTLSHAWPQV
                     VDISEVLRDGTPRRDEEIIVKGRLLLVNTVPVRSNGEIIGAISTFRDKTEVRQLMQRL
                     DGMVNYADALRERSHEFMNKLHVILGLLHLKSYKQLEAYIIKTANNYQEEIGLLLGKI
                     KSPIIAGFLLSKITRASDFGHSLVISSDSQLPDNNNEDQVTVLITALGNLIENALEAL
                     SQESGGEISVSLHYRHGWLHCEVSDDGPGIEPERIEAIFEKGVSSKGAERGVGLALVK
                     QQVEALGGVISVESEPGIFTQFFVQLPWDGKRTSL"
     gene            5630..6349
                     /gene="dcuR"
                     /locus_tag="MOX77_002497"
     CDS             5630..6349
                     /gene="dcuR"
                     /locus_tag="MOX77_002497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator DcuR"
                     /protein_id="HCA3357998.1"
                     /translation="MINVLIVDDDAMVAELNRRYVAQISGFHCCGTASTLEKAKEFIF
                     NSENHIDLILLDIYMQQENGLDLLPVLHSAGCKSDVIVISSAADAATIKDSLHYGVVD
                     YLIKPFQATRFEEALTGWLRKKTAMEKRQYYEQSELDLLIHGNSSSEQEPRRLPKRLT
                     QQTLRTLCQWIDAHQEQEFSTDELANEVNISRVSCRKYLIWLVNCHILFTSIHYGVTG
                     RPVYRYRVQPEHYSLLKQYCQ"
     gene            6666..6932
                     /locus_tag="MOX77_002498"
     CDS             6666..6932
                     /locus_tag="MOX77_002498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3357999.1"
                     /translation="MDNTYIGEQIRVSTRHTNNLKKWRDNDHISHILFNLSRDLPDGE
                     TQKLNNKRLFLKQTNHNLLLSLTPPAHRQRVLPSEHHHRKKIIT"
     gene            7079..8419
                     /gene="dcuB"
                     /locus_tag="MOX77_002499"
     CDS             7079..8419
                     /gene="dcuB"
                     /locus_tag="MOX77_002499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter DcuB"
                     /protein_id="HCA3358000.1"
                     /translation="MLFSIQLLIILICLFYGARKGGIALGLLGGIGLVILVFVFHLQP
                     GKPPVDVMLVIIAVVAASATLQASGGLDVMLQIAEKLLRRNPKYVSIVAPFVTCTLTI
                     LCGTGHVVYTILPIIYDVAIKNNIRPERPMAASSIGAQMGIIASPVSVAVVSLVAMLG
                     NVTFDGKHLEFLDLLSITIPSTLLGILAIGIFSWFRGKDLDKDEAFQKFISVPENRQY
                     VYGDTATLLDKKLPKSNWLAMWIFLAAIAVVALLGADSDLRPTFGGKPLLMVLVIQMF
                     MLLTGALIIILTKTNPASISKNEVFRSGMIAIVAVYGIAWMAETMFGAHMSEIQGVLG
                     EMVKEYPWAYAIVLLLVSKFVNSQAAALAAIVPVALAIGVDPAYIVASAPACYGYYIL
                     PTYPSDLAAIQFDRSGTTRIGRFVINHSFILPGLIGVSVSCVFGWIFAAMYGFL"
     gene            8515..10161
                     /locus_tag="MOX77_002500"
     CDS             8515..10161
                     /locus_tag="MOX77_002500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate hydratase"
                     /protein_id="HCA3358001.1"
                     /translation="MSKKEFIYQAPFPMGEDKTEYYLLTSDYVSVSEFNGESILNVEP
                     QALTLLAQQAFHDASFMLRPEHQQQVAAILHDPEASENDKYVALQFLRNSEIAAKGIL
                     PTCQDTGTAIIMGKKGQRVWTGGGDEAALSKGVFNTYIEDNLRYSQNAPLDMYKEVNT
                     GSNLPAQIDLYAVDGDEYKFLCVAKGGGSANKTYLYQETKALLTPGKLKNFLVEKMRT
                     LGTAACPPYHIAFVIGGTSAESTLKTVKLASTHYYDALPTEGNEHGQAFRDLHLEQEL
                     LEEAQKLGLGAQFGGKYFAHDIRVIRLPRHGASCPVGMGVSCSADRNIKAKINREGIW
                     IEKLEHNPGQYIPPALRQAGEGDAVKVDLNRPMKEILAQLSQYPVSTRLSLTGTIIVG
                     RDIAHAKLKERIESGEDLPQYIKDHPIYYAGPAKTPAGYPSGSLGPTTAGRMDSYVDL
                     LQSHGGSMIMLAKGNRSQQVTDACKKHGGFYLGSIGGPAAVLAQQSIKHLECVEYPEL
                     GMEAIWKIEVEDFPAFILVDDKGNDFFQQIVSKQCANCAK"
     gene            complement(10259..11689)
                     /gene="melB"
                     /locus_tag="MOX77_002501"
     CDS             complement(10259..11689)
                     /gene="melB"
                     /locus_tag="MOX77_002501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="melibiose:sodium transporter MelB"
                     /protein_id="HCA3358002.1"
                     /translation="MSISLTTKLSYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLV
                     GTLFLVARIWDAINDPIMGWIVNATRSRWGKFKPWILIGTLTNSLVLFLLFSAHLFEG
                     TAQVVFVCVTYILWGMTYTIMDIPFWSLVPTITLDKREREQLVPFPRFFASLAGFVTA
                     GITLPFVNYVGGADRGFGFQMFTLVLIAFFIASTIVTLRNVHEVYSSDNGVTAGRPHL
                     TLKTIVGLIYKNDQLSCLLGMALAYNIASNIINSFAIYYFTYVIGDADLFPYYLSYAG
                     AANLLTLIVFPRLVKMLSRRILWAGASVMPVLSCAGLFAMALADVHNAALIVAAGIFL
                     NIGTALFWVLQVIMVADTVDYGEFKLNIRCESIAYSVQTMVVKGGSAFAAFFIALVLG
                     LIGYTPNVAQSAQTLQGMQFIMIVLPVLFFMMTLVLYFRYYRLNGDMLRKIQIHLLDK
                     YRKTPPFVEQPDSPAISVVATSDVKA"
     gene            complement(11773..13128)
                     /gene="melA"
                     /locus_tag="MOX77_002502"
     CDS             complement(11773..13128)
                     /gene="melA"
                     /locus_tag="MOX77_002502"
                     /EC_number="3.2.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-galactosidase"
                     /protein_id="HCA3358003.1"
                     /translation="MMTAPKITFIGAGSTIFVKNILGDVFHREALKSAHVALMDIDET
                     RLEESHIVVRKLMDSAGASGRITCHTHQKAALQDADFVVVAFQIGGYEPCTVTDFEVC
                     KRHGLEQTIADTLGPGGIMRALRTIPHLWQICEDMTEVCPKATMLNYVNPMAMNTWAM
                     YARYPHIKQVGLCHSVQGTAEELARDLNIDPASLRYRCVGINHMAFYLELERKTADGT
                     YVNLYPELLAAYDAGQAPKPNIHGNERCQNIVRYEMFKKLGYFVTESSEHFAEYTPWF
                     IKPGREDLIARYKVPLDEYPKRCVEQLANWHKELEEYKTAERIDIKPSREYASTIMNA
                     LWTGEPSVIYGNVRNEGLIDNLPQGSCVEVACLVDANGIQPTKVGTIPSHLAAMMQTN
                     INVQTLLTEAILTENRDRVYHAAMMDPHTAAVLGIEEIYALVDDLIAAHGDWLPAWLR
                     R"
     gene            13397..14329
                     /gene="melR"
                     /locus_tag="MOX77_002503"
     CDS             13397..14329
                     /gene="melR"
                     /locus_tag="MOX77_002503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator MelR"
                     /protein_id="HCA3358004.1"
                     /translation="MSTQAISLLPPDPHMCNGDEKQTRSPLSLYSEYQRLDVELRPPH
                     RMASSHWHGQVEVNVPFDGDVEYLINNEVVQIKQGHITLFWACTPHQLTRPGNCRQMA
                     IFSLPMHLFLSWPLDRDLINHVTHGMVVKSLATQQLSTFEVLRWQQETSSPNEQIRQL
                     AIDEIGLMLKRFSLSGWQPILLNKTSRTHKNSVSRHAQFYVSQMLGFIADNYDQALTI
                     NDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKTILDVALTAGF
                     RSSSRFYSTFSKFVGMSPQQYRKLSQQRRQTMPG"
     gene            14562..16829
                     /gene="adiA"
                     /locus_tag="MOX77_002504"
     CDS             14562..16829
                     /gene="adiA"
                     /locus_tag="MOX77_002504"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709824.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine decarboxylase"
                     /protein_id="HCA3358005.1"
                     /translation="MKVLIVESEFLHQDTWVGNAVERLADALSQQNVTVIKSTSFDDG
                     YAILSANEAIDCLMFSYQMEQPDEHLSVRQLIGKLHERQQNVPVFLLGDREKATASLD
                     RDLLELVDEFAWILEDTADFIAGRAVAAMTRYRQQLLPPLFNALMKYSDIHEYSWAAP
                     GHQGGVGFTKTPAGRFYHDYYGENLFRSDMGIERTTLGSLLDHTGAFGESEKNAARVF
                     GADRSWSVVVGTSGSNRTIMQACMTDNDVVVLDRNCHKSIEQGLILTGAKPVYMVPSR
                     NRYGIIGPIYPQEMQPETLQKKISASPLTKTKAGQKPSYSVVTNCTYDGVCYNAKEAQ
                     DLLAKTSDRIHFDEAWYGYARFNPIYCDHYAMRGEPGDHNGPTVFATHSTHKLLNALS
                     QASYIHVREGRGAVNFSRFNQAYMMHATTSPLYAICASNDVAVSMMDGNSGLSLTQEV
                     IDEAVDFRQAMARLYKEFTDEGDWFFKPWNKDVVTDPQTGKTYDFADAPAKLLATDQN
                     CWVMRPGETWHGFKDLPDNWSMLDPIKVSILAPGMGDDGELEASGVPAALVTAWLGRH
                     GIVPTRTTDFQIMFLFSMGVTRGKWGTLINTLCSFKHHYDANTPLAQVMPELVQDYPD
                     TYANMGIHDLGDKMFAWLRENNPGARLNAAYSTLPVAEITPRDAYNAIVNNNIEMVAI
                     ENLPGRIAANSVIPYPPGIPMLLSGENFGDENSPQVGYLRSLQSWDHHFPGFEHETEG
                     TEIIDGVYHVMCVKA"
     gene            17126..17887
                     /locus_tag="MOX77_002505"
     CDS             17126..17887
                     /locus_tag="MOX77_002505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HCA3358006.1"
                     /translation="MRICSNEPCIVLLTEKDTWLRVNGKEPISLKANHMAILACENNV
                     IDISSLNSVLVIQVSRNNIKDYLQFLNKDLSHLPVWQRNADPLLTATCLTPDIFRVAA
                     RYSAMETPDEIVSERTRALLFTVLSRFLDHKKFISLLMHMLRSRISDSVYHIIQSDIH
                     KDWNLSAVASCLCLSPSLLKKKLKNENTSYSQIITTCRMRYAVNQLLMDGKNISQVSQ
                     LCGYNSTSYFISVFKEFYGMTPLHYVSQHRERSAA"
     gene            18027..>18864
                     /gene="adiC"
                     /locus_tag="MOX77_002506"
     CDS             18027..>18864
                     /gene="adiC"
                     /locus_tag="MOX77_002506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine/agmatine antiporter"
                     /protein_id="HCA3358007.1"
                     /translation="MSSDADAHKVGLIPVTLMVSGNIMGSGVFLLPANLAATGGIAIY
                     GWLVTIIGALALSMVYAKMSSLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGNI
                     AMVVIGVGYLSYFFPILKDPLVLTLTCVAVLWIFVLLNIVGPKMITRVQAVATVLALV
                     PIVGIAVFGWFWFKGETYMAAWNVSGMNTFGAIQSTLNVTLWSFIGVESASVAAGVVK
                     NPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSASPFGDAARMALGDTAGA
                     IVS"
BASE COUNT         4575 a         5083 c         4802 g         4404 t
ORIGIN      
        1 gagcgctatc ggcgctcatc agcgtcgcca tatagcccgg gcgcagacaa aagctcacca
       61 aaatcgccaa cacgctgacc agtagcccca gacggcgcac gccaaacaat gccgccaacg
      121 cgccgccgcc aatcaacggc gtcaatatca tcattgccgt ggtgtaagat gaacgccagg
      181 tcgccaccgt cggcagttgg taaatctgcg gaacggcgta taagaagacc accccgacta
      241 tcgccgccaa ccagaccaac gcgttacaca gcggcgtcgc acggttcagc aataaaccga
      301 gcgcccccag accgccgagc gccacaaaag ccgccgacaa gacaatctcg ttactcatcg
      361 gcgaatgtcc gacgcgcagc agcatattca gcgcacgcaa cggttgcccg acgtggaagg
      421 taccgacaac gacgccaatc ccaaacaggc acatcaccga gaacagaccg atagccttac
      481 gccgcggcgc gaccagcccc attgcgccgc caatcagcag cagaataaac gcgccgaccg
      541 cgctctgggt aaagaccgta aaaaagacca gcggtaactc atgcatggcg cacctcccga
      601 atgttcatga ttgcgccttc cgtatcgccc gtgggtctcg ctttcggatg cggtttaata
      661 atgaggttag gatgggtgaa cgacgccgaa ggcagcggcg cgatttgatt ctccgtgcca
      721 tattttgccc gtaattcatc gacagggccg aaatccagcg ctcgctgcgg gcaagaatcc
      781 acacaaatgg ggcgcagatt gttctccagt cagtcaagac aaccgtcgca tttacgcatc
      841 acgtttgcct gcgtatcaaa ctgcggcgcg ccgtaggggc agcgcatttc acaatagcga
      901 cagccgacgc atacgctgtc atccaccacg accagaccat cttctttgcg tttatgcatc
      961 gccccggtcg gacagccgga gacacatacc ggctcatcgc aatggttaca agcaatagag
     1021 aggtagtagg taaaggtgtc gtgatgccag ctttccccct ctttcaccca gcttccgccg
     1081 ccatattcat agacgcggcg cagtttcggg ccgacatcca gatctttatt atccttgcag
     1141 cttacctggc aggttttaca gcctgaacag cgcgaggagt caacataaaa gccacactgt
     1201 ttcatcgtac atcactcctt aagcgcgttt aatttcaacc agattggtat gctgcggatt
     1261 gcctttcgcc agcggcgaag ggtgatggct ggtcagcgta ttgatacagc cgccgacatc
     1321 aacaccgttg ccgtcaagcc gcgtccacgc gccctgcggc atcgccgcca cgccgggtaa
     1381 aatgcgctgg gtaactttac agggaagctc caccacgccg cggtcattga atacatgcac
     1441 ccgatcgccg gacttcagtt ggcgggcgct ggcgtcaatc gggttaatcc agacttcatc
     1501 cggcaccgcc tcatgcagca tcagcacatt gctgtaggtc gagtgggtat gccctttggt
     1561 atggaaaccg cttaactgca acggatactt cgccgtcaat gctttgttaa ggtgcgactc
     1621 tttcgctgga caaaattccg gcaatgcggg aattcgctcg ccttctggca acgtccacgc
     1681 ttgcgccaga tccgccagcg cctaggagta aatttcaatt ttgcccgacg gcgtggagag
     1741 tggattagcc tcggcgtcgg cgcggaaatc agcaaacgca aggctctgct gctcggtagc
     1801 gatacgctgg tcaatcacgc ccatctcttt cgccacgctc cactccggca ggtatggacg
     1861 tttttcacgg atctgctgat agtgcatctc cgcccactgc gcctgagttc ggccctcggt
     1921 atattgctcg cgcagtccaa gatgcccggc gatatccgcg cagatgtcat acgtgctgcg
     1981 cacttcccac atcggtttaa cggttttctg aatcgcaatc atatagttat gcgatcctgc
     2041 cgcataggag ctgtccacca ggtcttccgc ctcaagatag ctggtctccg gcaacagcag
     2101 atccgcatac atcgcgctgg gcgtcatatg gttttcaatc acgataatgg tttcacacag
     2161 cgattcatcc gcgagaattt gacgggtgcg gtttgtttcg ccgtgctgat taagcaaagt
     2221 attaccggcc tggttgaaaa acagcttaat cccggttttt agcctgtccg cgccttttac
     2281 gcccattgtc gtcgcggtca ttttctccgg atgctgaatg gcgtccgtcc acagatagca
     2341 aggaatagag gttgtgatcg gattcttacc gacaggcaac aatggcacgc catacggcgt
     2401 accgtaaggc cagttgccat tattggtgcc gggccgcccg aagtggccgg ttaacgctgg
     2461 cagcgtctga atagcacgca cggtttgttc gccgttggca tgacgctgcg gcccccagcc
     2521 ctggcaaata tagcaggcgc gcgcgaggcg atttcgcgcg ccagttggcg aatacgcgtt
     2581 gccggaattc cggtgatatc cgccgcccat tccggggttt tcgcgatacc gtcatcgccc
     2641 gtgccaagaa cataatcttt atagctggcg ttaggcgcag ccgtgtccgg caaggtgcta
     2701 cggtcatagc cgacgcaata gcggtttacc agcgcctcgt cgagaagctg ttcggtaatc
     2761 agcgtatgcg ctatgccggc gactagcgcg gcgtccgtgg ttgggcgaat cggtagccat
     2821 tcggcgtgtt cggtaatcac cgaatcggta tagcgcggat cgataataat gactcgggct
     2881 ttcgaggtct ccagcgcccg gcgcagctct tcaacctgac cgccgccgga catccgcgtt
     2941 tctgagagat tcaggccaaa tagcaccacc agatcggaat gcgcgatctg cgtaaaatgg
     3001 ctaccgacat aatcaccgtg ggtataaggc gtggcggcgg cgatttgcgc cgtggaatag
     3061 gtgttgtgat aatttaaata accgccggtg agatttagta atcttatcca ggcgggtcta
     3121 ccctgcgtgt gataatacgc gccggattga taattataat aaatagcttc ccggccatat
     3181 ttttcgctaa cgcgcgttaa ttccgccgca ataaaggctg tggcctcatc ccatgaaata
     3241 cgtttaaatt ttccttcgcc gcgttttccc actcttttca tcggatactt aatgcgatcc
     3301 gggctataaa cgcgccagcg actggaacgc ccgcgcaggc agggacgaat ctgatgctcg
     3361 ccgaataccg cgtcatcttt cgcgtcttcc ggttcaatac gcacaatgcg atcatttttc
     3421 acgataacct taagcgggca tcggctgcca cagttgacca gacaggcgct gtgcctgacg
     3481 gtttcgccgt tggcatcctt cggtatcggg gtatcctgcg cctgggcagt ggtagcaaaa
     3541 ggcagcgtaa tcgcctgact tagcgtcacc gccgccccta cttttgcagt agcgacaata
     3601 gcatcacgtc gggttatggt tgtgttcagc cattttttat ttccattttt tatttctcac
     3661 attgcttcca taattattaa taatatgtaa tgaaaactaa tcataataga ttaaatatta
     3721 gcgctgattg attgtgatca aacgcattct gaacgtcagt aaaaataaaa tgtgataccg
     3781 catacgttat tataaaaatt aatgaaaaat tattttatgt aattctgatg aaaataaatt
     3841 acccatcacg gtatccggcg atattaatta acgacatgag caggtagcgc cccctgcaag
     3901 actagacggg cttttcaaca ctggagcaac atcgcctatg cctttgaatt agacgcctca
     3961 tcagggataa taaccttacg attcgtccgc tcaggtccac tatgaaacac tccctgccat
     4021 gccgggcgtt acgcaaacgc cccatgaaac tcggcactac cgtcattctg atggtcagcg
     4081 ccgttttgtt ttcggtgctc gttgtggtcc atctgatcta tttttcgcaa atcagcagca
     4141 tgacgcgcga cgcgctggca gataaagcgc tggcggtggc tcgctcgctg gcggactctc
     4201 cggcaattcg cgaggggctg aaaaaaccgc ctgcggaaag cggcattcag ccgctctccg
     4261 aagcggtgag ccagcataat ggctttttgt ttattgtggt gaccaatatg cagggcatcc
     4321 gttattcgca cccagaaacg cagcgaatcg gtcaaccgtt caaaggcgat gacattctgc
     4381 tcgcactgca gggaaaggaa aacgttgcca ttaatcgcgg ctttcttgcc aaagcgctgc
     4441 gcgttttcac accggtttat gatgaacacc accgacagat cggcgtggta gcgattggcc
     4501 tggaactcag tcacgttacg cagcagatca acaatagccg cggcagtatt atctggtcca
     4561 ttctgttcgg cgctctggtg ggattattag gcacctatgc gctggtcaag gtgctaaaac
     4621 gtatcctgtt tggcctcgaa ccctatgaga tctcaaccct gtttgaacaa cgccaggcga
     4681 tgctgcagtc aatcaaagag ggcgtaatcg ccgtagatgg tagcggcgaa gtcacgttga
     4741 ttaaccacgc ggcgcaggcg ctgctcgatt atcgaaaaac acaggatgac gccagattat
     4801 ccaccctgag tcatgcctgg ccgcaggtgg tggacattag cgaagtgttg cgtgacggta
     4861 cgccgcgccg cgatgaagag attatcgtca aaggccgcct gctgctggtg aataccgttc
     4921 cggtgcgcag caacggcgaa attatcggcg cgatatccac cttcagggat aaaacagaag
     4981 ttcgccaact gatgcagcgg ttagacggga tggtgaacta cgcggatgcg ctccgtgaac
     5041 gatcccacga attcatgaac aaattacatg tgattctggg attattgcac ctgaagagtt
     5101 ataagcagct tgaagcgtat attatcaaga cggccaataa ctatcaggaa gagatcggtt
     5161 tgctgctggg taaaataaag tcgccgatta tcgctggctt tttgctcagt aagattaccc
     5221 gcgcctctga tttcgggcac agcctggtga taagcagcga cagccagtta ccggataata
     5281 acaatgaaga tcaggttacg gtgctgatta cggcgctggg taatttgatt gaaaacgcgc
     5341 tggaagcgtt gagccaggaa tccggcggcg aaatcagcgt ctcgttacac taccgtcatg
     5401 gctggctgca ttgcgaagtg agcgatgacg gtccgggtat cgaacctgag cgcatcgagg
     5461 cgatttttga aaaaggcgtc tcgtcgaaag gcgccgaacg cggcgtcggt ttagcgctgg
     5521 ttaaacagca ggttgaagcg cttggcggcg taatttccgt ggagtccgag cctgggatct
     5581 tcacacaatt ttttgtacag ttaccctggg atggaaaaag gaccagccta tgatcaatgt
     5641 attaattgtc gatgacgatg cgatggtcgc ggagttaaat cgccgctatg tcgcgcaaat
     5701 ctccggtttt cattgttgtg gaaccgcttc gacgctggaa aaagcgaaag agtttatctt
     5761 caacagtgaa aatcacattg acctaatcct gctggatatc tatatgcagc aggaaaacgg
     5821 attggatctg ctgcctgtcc tgcacagcgc aggctgcaaa agcgacgtta ttgtcatttc
     5881 ttctgccgct gacgccgcca ccattaaaga ttcgcttcac tacggcgtgg tggattatct
     5941 gatcaagcct tttcaggcca cgcgctttga agaagcgttg accggctggc tacgtaagaa
     6001 aacggcgatg gaaaaacgcc agtattacga acagtctgag cttgacctgc tcattcacgg
     6061 taattcatcc agcgagcagg agcctcgtcg gctgccaaaa aggctgaccc agcaaacgct
     6121 acgcacctta tgccagtgga ttgatgcgca tcaggagcag gaattttcta ccgacgagtt
     6181 agccaacgaa gtgaatatct cgcgcgtctc ctgccgtaaa tatctcatct ggctggtgaa
     6241 ttgccatatc ttgtttacca gtattcatta cggcgtgacc ggcaggccgg tttaccgcta
     6301 ccgcgttcag ccggaacatt actctttact gaaacaatat tgtcagtaag gataccgcat
     6361 aaagccgacg cgaagcgtta tatcttggta acatttatta taacaatgcc aataaaaacg
     6421 ctatcacatt aataacaaac ctgggaaatt gtgtcagatc aaatatactc aacccaggcc
     6481 tgttaacgtt attttctatt attacagcgc tatgcgctgt ttttaatttc aaaacgataa
     6541 caaaagttaa ttaagtatta tcccatgccg agagtgtgta tttttattaa aaaagggatt
     6601 tgtccggaat tttcctgaca cttaaataaa attatgtttg tagcaatgga gcttgtgcta
     6661 cgcctatgga caatacgtat attggtgagc agatacgcgt ctccacacgc catactaata
     6721 atttaaaaaa atggcgtgac aatgatcaca taagtcacat tctgttcaat ttatctcgtg
     6781 atttacctga tggcgagaca caaaaattaa ataataaacg cctgttttta aaacagacaa
     6841 atcataattt actgctctcg ctgactccac ctgcccatcg ccagagggtg cttccctctg
     6901 aacatcacca tcgcaagaaa ataattactt aaagcaactc tgtaaaaagc ttaatcgtta
     6961 atcgtcgcca ctgacgcatt gaatattcgc catttcctga tgctcattca cacaaatcag
     7021 aagatggctg tgatccattt atcaaaattg actgggttta tcgcgaggat aaataaaaat
     7081 gttatttagt atacagcttc tcataatatt aatatgtctg ttttatggtg cccgaaaggg
     7141 cgggatcgcg ctcgggttgt tgggcggtat cggtctggtc attctggtgt ttgttttcca
     7201 tctccagcca ggtaaaccgc ccgttgacgt aatgctggtc attatcgcgg tagtcgccgc
     7261 gtcggcgacg ttgcaggcgt caggcgggct ggatgtgatg ttgcagattg ccgaaaagct
     7321 gctgcgccgc aaccccaaat acgtctctat tgtggcgccg ttcgtcacct gtaccctgac
     7381 gattctgtgt gggacaggcc acgtggttta caccattttg ccgattatct atgacgtggc
     7441 gatcaagaat aatatccgtc cggaacgtcc aatggcggcc agttctatcg gcgcgcaaat
     7501 gggtatcatc gccagtccgg tttccgtcgc cgtggtttct ctggtagcga tgctgggcaa
     7561 cgtgacattt gacggaaaac atctggagtt cctcgatctg ctgtcgatca ccatcccgtc
     7621 taccctgctc ggtatcctgg caatcggtat ttttagttgg ttccgcggta aagatctgga
     7681 taaagacgaa gcgtttcaga aatttatctc cgtaccggaa aaccgtcagt acgtgtacgg
     7741 cgataccgcg acgctgctgg ataaaaaact gccgaaaagc aactggctgg cgatgtggat
     7801 cttcctggcg gcgattgccg tggtcgctct cctgggcgcg gactccgact tacgtccaac
     7861 cttcggcggc aaaccgttgt tgatggtgct ggtcattcag atgttcatgc tgctgaccgg
     7921 ggcactcatt atcattctga ccaaaaccaa tcctgcgtct atctcaaaaa acgaagtttt
     7981 tcgttccggt atgattgcga ttgtcgcggt atacgggatc gcctggatgg cggaaaccat
     8041 gttcggcgcg catatgtcgg aaattcaggg cgtgctgggc gaaatggtca aagagtatcc
     8101 gtgggcctac gccatcgttc tgctgctggt ctccaagttt gttaactccc aagcagcggc
     8161 gctggcggcg attgttcccg tcgcgctggc tatcggtgtc gatccggcgt atatcgtggc
     8221 ctctgcgccg gcatgttatg gctactatat cctgccgacc tacccaagcg atctggcggc
     8281 gattcagttt gaccgttccg gcacaacccg tattggtcgc ttcgtcatta accacagctt
     8341 cattctgccg ggtttgattg gcgtgagcgt ctcctgcgtc tttggctgga tctttgccgc
     8401 aatgtacgga ttcctgtaat ggccgcgcgc gccgcccggc tatgcgcggc gcgcgactta
     8461 gagcctggcc catgaggctc ttaatacatt ttcttactat taggctggaa gcacatgtcg
     8521 aaaaaagagt ttatctatca ggcgcctttc ccgatgggag aggacaaaac agagtattat
     8581 ctgctcacct ccgattatgt cagcgtcagt gaattcaatg gagaatctat cctcaacgtt
     8641 gagccgcagg cgttaacgtt gctggctcag caggctttcc atgatgcgtc ttttatgctc
     8701 cgtcctgaac accagcagca agtcgccgcc attctccatg accccgaagc cagcgaaaac
     8761 gacaaatatg tggcgttgca attcctgaga aactccgaga tcgccgccaa aggcattctg
     8821 ccgacctgcc aggataccgg cacggcgatt atcatgggta aaaaaggcca acgcgtctgg
     8881 acgggcggcg gcgatgaagc cgcgctctcc aaaggcgtgt ttaataccta tatcgaagat
     8941 aacctgcgct actcgcagaa cgcgccgctg gatatgtaca aagaggtcaa taccggcagc
     9001 aacctgccag cgcaaatcga tctctatgcc gtcgatggcg acgagtacaa gttcctttgc
     9061 gtggcgaaag gcggcggttc agcaaacaaa acgtatctct atcaggagac caaagcgctg
     9121 ctcaccccag gcaagctgaa aaacttcctc gttgagaaaa tgcgcacgct gggcaccgcg
     9181 gcctgtccgc cataccatat cgcctttgtc attggtggca cctcggcgga aagcacgctg
     9241 aaaaccgtta aactcgccag cacccactat tacgacgcgc tgccgacgga aggtaacgag
     9301 cacggccagg cattccgcga tctccacctg gaacaggaac tgctggaaga agcgcaaaaa
     9361 cttggcctcg gcgcccagtt cggcgggaaa tatttcgccc acgatattcg cgtaattcgc
     9421 ctgccgcgtc acggcgcttc ctgtccggtg gggatgggcg tctcctgctc ggcagaccgt
     9481 aacatcaaag cgaaaatcaa ccgcgaaggc atctggatcg aaaaactgga acacaatccg
     9541 ggccagtata ttccgccagc gctgcgtcag gcgggcgaag gcgacgcggt gaaagtcgat
     9601 cttaaccgtc cgatgaaaga gatcctcgcc cagctatcgc agtacccggt ctcgactcgc
     9661 ctgtcgctga cgggcaccat tatcgtaggt cgcgatatcg cccacgcgaa gctaaaagag
     9721 cgtattgaat ccggcgaaga cctgccgcag tatattaaag accaccccat ctattacgca
     9781 ggtccggcca aaaccccggc aggttatcca tctggctcat taggccccac caccgcaggc
     9841 cgaatggact cttatgtcga tctactgcaa tcccacggcg gcagtatgat catgctggcg
     9901 aaaggcaacc gtagtcagca ggtcacggat gcctgtaaaa aacacggcgg cttttatttg
     9961 ggcagtatcg gcggcccggc ggcggtactg gcacagcaga gcattaagca tctggagtgc
    10021 gtcgagtatc cggaactcgg catggaagct atctggaaaa ttgaagtaga agatttcccg
    10081 gcctttattc tggtggatga caaaggcaac gatttcttcc agcagattgt cagcaaacag
    10141 tgcgctaact gcgcgaaata acctggcagg cccggcgttc tcccgggccg cgttatcggt
    10201 taattgccgg atggcgctac gcttatccgg cttatccggc ctgcacgaga gaccatgctc
    10261 acgcttttac atcgctggtc gctaccacag aaatcgccgg gctatccggc tgttcgacga
    10321 atggcggcgt tttccggtat ttatccagca ggtggatctg aatcttgcgc agcatatcgc
    10381 cgttcaaacg gtagtagcgg aagtagagaa ccaacgtcat catgaaaaac agtaccggca
    10441 ggacaatcat aataaactgc atcccctgca gggtttgcgc agactgcgcc acgttcggcg
    10501 tgtagccaat cagccccagc accagagcga taaagaacgc cgcaaacgcc gagccgccct
    10561 tcacaaccat cgtctgtacg gaataagcga tactctcgca gcgaatattg agcttaaatt
    10621 ccccataatc gaccgtatcc gccaccatga ttacctgaag cacccaaaag agcgcggtcc
    10681 cgatattcag gaaaataccc gccgccacga ttaaagcggc attatggaca tccgccaacg
    10741 ccatcgcgaa gagccctgcg caactcagaa cgggcatcac ggaggcgccc gcccacaata
    10801 tccgccgcga taacattttc accagccggg ggaagacaat cagcgtcagc agattcgccg
    10861 cgccggcgta agaaaggtaa tagggaaaaa gatcggcatc gccaatcaca taggtgaagt
    10921 agtagatcgc aaagctattg ataatattgg aggcgatgtt atacgccagc gccattccca
    10981 acaggcaaga gagctgatcg tttttgtata tcaatccaac gatcgttttt aacgtcagat
    11041 gtgggcggcc cgccgttaca ccgttgtcgg aggagtacac ctcatgtacg ttgcgtaatg
    11101 tcacgatagt cgaggcgata aagaacgcaa tcagtaccag cgtaaacatc tgaaagccga
    11161 acccacgatc cgccccgcca acatagttca caaacggcag cgttataccg gcagtgacga
    11221 agccagccag actggcgaag aaacgcggga acggcaccag ttgttcgcgt tctcgcttat
    11281 caagcgtaat ggtcggcacc agcgaccaaa atgggatatc cataatggta tacgtcatgc
    11341 cccacaggat gtaggttacg cagacaaata caacctgcgc ggttccctca aaaagatggg
    11401 cgctgaacag caggaaaagc accagcgaat tggttaaggt gccgatcaat atccacggct
    11461 taaatttccc ccaccgcgaa cgcgtggcgt tgacaatcca gcccatgatg ggatcgttta
    11521 tcgcatccca aattcgcgcg accagaaaga gggtgccgac gaggccgacc gagagtccca
    11581 ccacatcggt gtagtaatac atcaggtaca tatacacaat gccgatggcg aaatccttac
    11641 caaacgcacc gaacccgtaa ctcagctttg ttgtcagaga gatgctcata gggtaccggg
    11701 tcgctgttac cagcgcccgc cttctgttag tagaggttaa acgccggatc tgccgtccag
    11761 cgcggctgga gattaacggc gtaaccaggc cggaagccag tcgccatgcg cggcgatcag
    11821 atcgtcaacc aacgcataga tttcttcgat acccagcacc gccgcggtat gagggtccat
    11881 catcgccgcg tgatacacgc gatcgcggtt ttccgtgagg atggcttcgg tcaacagcgt
    11941 ttgcacgttg atgttggtct gcatcattgc cgccagatgg gaagggatcg tccccacctt
    12001 cgtcggttga atgccgttgg catctaccag acaagccacc tcgacgcagc ttccctgcgg
    12061 caggttatca atcagtccct cattacgcac attgccgtaa atcacgctcg gctcgccggt
    12121 ccacagagcg ttcataatgg tgctggcgta ctcgcgggac ggtttgatgt cgatacgctc
    12181 ggcggtttta tactcctcca gctctttatg ccagttcgcc agttgttcta cgcagcgttt
    12241 cggatattca tccagcggca ccttgtagcg cgcaatcaga tcctcgcgtc ccggtttaat
    12301 aaaccacggc gtgtactcgg caaaatgctc tgatgactcc gtgacgaagt agcccaactt
    12361 tttgaacatc tcatagcgca cgatgttctg gcagcgttca ttgccgtgaa tattgggctt
    12421 cggcgcctgt ccggcgtcat aagccgccag caattcagga tagagattga cataagtccc
    12481 gtcagccgtt ttgcgctcca gttccaggta aaacgccatg tggttaatgc cgacgcagcg
    12541 gtagcgcagc gaggcgggat cgatattcaa gtcgcgcgcc agttcttccg ccgttccctg
    12601 taccgaatgg cacaggccga cctgtttgat atgcggatag cgggcataca tcgcccaggt
    12661 attcatcgcc atcgggttga cgtaattgag catggtggcc ttcggacaga cttccgtcat
    12721 gtcttcgcaa atctgccaca gatgcgggat ggttcgcagc gcgcgcatga tgccgcccgg
    12781 ccccagcgta tcggcgatcg tctgttccag gccatgacgc ttacaaacct caaaatcggt
    12841 cacggtgcag ggttcatagc cgccaatctg aaaggcgacc accacgaaat ccgcatcctg
    12901 tagcgccgct ttctggtggg tatggcaggt aatccggcca gaagcgcccg ctgagtccat
    12961 cagtttccgt accacaatgt gcgactcttc cagccgggtt tcgtcaatat ccatcagggc
    13021 gacatgcgct gactttagcg cctcgcggtg aaacacatcg ccgaggatat ttttgacgaa
    13081 aatcgtagaa cctgcgccga taaaggtaat tttgggtgcc gtcatcatga ctctccagaa
    13141 cagtagtgaa caccttcatg gtggcacgcg ttcccggtga aaacctccgt cttccccgat
    13201 gagcattccc gaaaactcag atcgtatgct ggcgcgcggg agatctgagt ttttgggaca
    13261 aaatggcgta aaaagcagag tattcggcct gatagtcagg ctacgctcta caatatcgac
    13321 ggattctgtg tccggattcc cggtttcctc ccggctaaag gggcataatt ctgataattc
    13381 aggaaatgga gtgacgatga gtacgcaagc aatatccctc ctcccgcccg acccgcacat
    13441 gtgcaacggc gatgaaaagc aaacccgtag cccgctgtcg ctctattccg aatatcaacg
    13501 actggacgtt gagctgaggc cgccgcacag aatggccagc agtcactggc atgggcaagt
    13561 agaagtgaat gttccgtttg acggcgatgt ggagtattta atcaacaatg aagtcgtgca
    13621 gataaagcag ggacatatca ccctgttttg ggcctgtacg ccacaccagc ttacccgccc
    13681 cggcaactgc cgccagatgg cgattttcag tttgccgatg cacctgtttc tctcctggcc
    13741 gctggatcgc gatcttatca accatgtcac gcacgggatg gtggttaaat cactggcgac
    13801 ccagcagctt agcacctttg aagtgttgcg ctggcagcag gaaacaagca gcccgaatga
    13861 gcaaattcgc cagttggcga tcgatgaaat cggcttgatg cttaaacgct ttagcctttc
    13921 cggctggcaa cccattttgc tcaataaaac atcacgcacc cacaagaata gcgtctcacg
    13981 ccatgcgcag ttttacgtaa gccagatgct gggatttatt gccgataact acgatcaggc
    14041 gctaaccatt aacgacgttg cggagcatgt caaactcaat gctaactacg cgatgggaat
    14101 attccagcgg gttatgcaat tgacgatgaa gcagtacatc acggcgatgc gcatcaatca
    14161 cgtacgtgcc ttattgagcg atactgacaa aacgatcctc gatgtcgctc tgactgccgg
    14221 gttccgatcc agcagccgtt tttacagtac ttttagcaaa tttgtcggta tgtcgccgca
    14281 acaataccgc aagctaagcc agcaacgacg ccagacgatg cccggctaaa gccggatacc
    14341 actatcagcc aaaaaaataa ttcacctgtc gataaacggc gggtgaaatt gctcgctatc
    14401 aataattaac ccattgttta ttaaacaata atatcaataa ctgaccatta ttccatcact
    14461 ttacaccccc tatttgacgg ggtaatactt gcccacgtca cattcatacg gcgggtcggc
    14521 aaggcgtaaa ttgcacggcc tccacaaccg ggtaaaagat gatgaaagta ttaattgttg
    14581 aaagtgagtt tctgcatcag gacacctggg ttggcaacgc ggttgagcgt ctggcggatg
    14641 ccttgagcca acaaaatgtt accgtcatta aatcgacatc cttcgatgac ggctatgcca
    14701 tcttgtccgc gaacgaagcc attgactgtc tgatgtttag ctaccaaatg gaacaaccgg
    14761 atgagcacct gagcgtcagg caattgatcg gtaagcttca cgagcgtcag caaaacgtgc
    14821 ccgttttcct gttaggcgac agggaaaaag cgacggcatc gctggaccgc gacctgctgg
    14881 agcttgtcga tgaattcgcc tggattctgg aagacaccgc tgactttatc gccggacgcg
    14941 ccgttgccgc catgacccgg tatcgccagc aactgttacc gccgctgttt aacgcgttga
    15001 tgaaatacag cgacattcat gaatattcat gggcggcgcc gggacaccag ggcggcgtcg
    15061 gtttcactaa aacgcctgcc ggtcgctttt atcacgatta ttatggcgaa aacctgttcc
    15121 gcagcgatat ggggattgag cgtaccacgc tcggttcact cctcgaccat accggcgcgt
    15181 ttggcgaaag cgagaaaaac gccgcccgcg tattcggtgc tgaccgctcc tggtccgtgg
    15241 ttgtcgggac ctcaggttct aaccgtacta ttatgcaggc ctgtatgacg gataatgatg
    15301 tcgttgtact ggatcgtaac tgccataaat ccatcgaaca ggggctgatc ctcactgggg
    15361 ccaaaccggt atatatggtg ccaagccgta accgttacgg cattatcggg ccaatctacc
    15421 cgcaggaaat gcagcctgaa accttgcaga aaaaaatcag cgccagcccg ctgaccaaaa
    15481 ccaaagccgg acagaaaccg tcttacagcg tggtgaccaa ctgtacctat gacggcgtat
    15541 gctataacgc caaagaggcg caggatctgc tggcaaaaac cagcgatcgc attcacttcg
    15601 acgaagcatg gtacggctat gcgcgcttca acccgattta ttgcgatcac tacgcgatgc
    15661 gcggcgagcc aggcgaccat aacggtccga ccgtgtttgc cacccactcc acgcacaaat
    15721 tactgaacgc gctttcacaa gcttcctaca ttcacgtccg tgaaggccgt ggcgcggtga
    15781 atttctcccg cttcaaccag gcctatatga tgcatgccac cacctctccg ttatatgcca
    15841 tctgcgcatc caacgatgtg gcggtatcga tgatggacgg taacagcggc ctgtccctga
    15901 ctcaagaggt gattgacgaa gcggttgatt tccgtcaggc gatggcgcgt ctttataaag
    15961 agtttaccga tgaaggcgac tggttcttta aaccgtggaa taaagacgtc gtcaccgatc
    16021 cacaaaccgg taaaacgtat gacttcgccg acgcgccggc aaaactgctg gcaaccgacc
    16081 agaactgctg ggtcatgcgc cccggggaaa cctggcacgg ctttaaagac ctgccggata
    16141 actggagtat gctggacccg attaaagtca gtatcctggc gccgggtatg ggcgacgatg
    16201 gcgaactgga agcatccggc gtacctgctg cgctggtcac agcatggctt ggccgccacg
    16261 gtatcgtgcc gacccgcacc accgacttcc agattatgtt cctgttctcc atgggggtaa
    16321 ctcgcgggaa atggggaacg ctgatcaaca cgctgtgctc cttcaaacat cattacgacg
    16381 cgaatacgcc gctggcgcag gtgatgccgg aactggtgca ggattatcct gacacttacg
    16441 cgaacatggg tattcatgac ctgggcgata aaatgtttgc ctggctacgt gaaaataacc
    16501 cgggcgcccg tctcaatgcc gcctattcca ccctgccggt tgcggagatt accccgcgcg
    16561 acgcctacaa cgcgatcgtg aacaacaata ttgaaatggt ggcgattgaa aatctaccgg
    16621 gtcgcattgc ggcgaactcc gttattcctt acccgccagg catcccgatg ctgctctccg
    16681 gtgaaaactt tggcgatgaa aacagtccgc aggtgggtta cttacgctca ctgcaatcct
    16741 gggatcatca cttccctggc tttgagcatg aaaccgaagg cacggaaatt attgatggcg
    16801 tatatcacgt tatgtgcgtg aaagcctaat cacaaagagt ctttttttga ggatggcatg
    16861 tattccctga gtattgctgc aaaacaataa tactgtcata cctttttgcg cgggccccat
    16921 cccgcgcttt ttttatacaa aaatgacaag tttccactcg cgtacaactt tttgtacacc
    16981 ctaattcatc gtacaaatat tgtaatatta ttcaggaaag ctattttaat gcagtttcaa
    17041 ttcatcacac aattgattca gtccccgtta tctctcccgt ttggcgagat ccggtctttt
    17101 atgttcatat tccaggagtt cgggtatgag gatttgcagc aacgagcctt gcatagtgtt
    17161 attaaccgaa aaagatacat ggttacgagt aaatggtaag gagccaatca gtttaaaagc
    17221 gaatcatatg gccattctgg cttgtgaaaa taacgttatt gacatttcat cattaaatag
    17281 cgtgctagta atacaagtga gtcgcaataa tattaaagac tatttacaat tcctgaataa
    17341 agatctctca caccttcccg tctggcaacg caacgccgat cccttattga ccgccacctg
    17401 tctgacgccg gatatcttca gggtcgccgc ccgctacagc gcgatggaaa caccggatga
    17461 aattgttagt gaacgcaccc gtgcgctcct tttcaccgtt ttatcccgct ttcttgacca
    17521 caaaaaattt atttctttgt taatgcacat gctgcgcagc cgcatcagtg acagcgttta
    17581 ccacatcatt cagagcgata ttcataaaga ctggaatctg agcgccgttg ccagctgcct
    17641 gtgcctgagt ccaagcttgt taaagaaaaa gctcaaaaac gagaatacca gttatagcca
    17701 aataatcacg acctgccgaa tgcgttatgc cgtaaaccaa ttattaatgg acggaaagaa
    17761 tatctcgcaa gtctcacagc tttgtgggta taacagcacg tcgtacttta tttccgtgtt
    17821 taaagagttt tatggtatga cccccctgca ttatgttagc caacatcggg aacgatcggc
    17881 tgcctaattt ttctacactc aacgataaga cacgataata acagcattgg cgataacccg
    17941 tctccgatat aattcagcgg cattctgagg gggtatgata cgacgtaatt tatcgtaacg
    18001 aagtcacctt ttcaggagtc caaattatgt cttcggatgc tgatgctcac aaagtgggcc
    18061 taatccccgt caccttaatg gtatcgggga atattatggg ttcaggggta ttcttactcc
    18121 ctgccaacct ggcggccact ggcgggattg caatctacgg atggctggtc actatcatcg
    18181 gcgccctggc gctgtcgatg gtttatgcca aaatgtcgtc cttagatccc agtcccggcg
    18241 gttcttatgc ctatgcacgc cgctgcttcg ggccgttttt gggctatcaa acgaacgtgc
    18301 tgtactggct ggcatgctgg atcggtaata tcgcgatggt cgttatcggc gtcggctatc
    18361 tgagctattt cttcccgatt ctgaaagatc cgctggtatt aacgcttacc tgcgtcgcgg
    18421 tgctgtggat ttttgttctg ctgaacatcg tcgggccgaa aatgattacc cgcgtacagg
    18481 ccgtcgccac cgtactggcg ctggtgccta tcgtagggat tgcggtcttc ggctggttct
    18541 ggtttaaagg cgaaacctat atggcggcct ggaacgtgag cggtatgaat accttcggcg
    18601 cgattcaaag cacgttgaac gtcacgctat ggtcattcat cggggtagaa agcgcctccg
    18661 ttgcggccgg tgtggtaaaa aacccgaaac gcaacgtgcc tatcgccacc atcggcgggg
    18721 tactgatcgc cgccgtctgc tatgtactct ccacaacggc gattatgggg atgatcccca
    18781 acgcggcgct ccgtgtgtca gcatcgcctt tcggtgacgc ggcgcgtatg gcgctgggcg
    18841 ataccgcagg ggctattgtt tcct
//
LOCUS       DAGWFR010000070        18670 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.071, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000070 DAGWFR010000000
VERSION     DAGWFR010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 18670)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18670)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18670
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.071"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(58..1428)
                     /locus_tag="MOX77_002507"
     CDS             complement(58..1428)
                     /locus_tag="MOX77_002507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate porin"
                     /protein_id="HCA3358008.1"
                     /translation="MKAKYLALMIGACFSHNLWAANDITIEQRLAELEQRVVNAEKRA
                     SDAEAQIRSLKQQQVAATPTVNVQSAEPIAADKTPPKLTLSGFSDIKFYGDVEFNMDA
                     ASRSGSLTSMRTSANKDWASGTNERWDINGRLLLGFDGYQRLDNGNFAGFSVQPLADL
                     TGKMNLDDAVFFFGRENDWKIKVGRFEAYDMFPLNQDTFIEYSGNTANDLYSDGYGYI
                     YMMKEGRGRSDSGGNFLLSKTIDNWYFEVNTLLENGSTLYTEKQYHGMDLTNDKNVAY
                     VRPVIAWQNGRFSTAIAMESNVVNNAYGYYENGKWIDQSDRTGYGFTMTWNGQKTDPE
                     DGAVINLNTAYMDATDETDFTAGVNALWHRFELGYIYAHNKIEAFNATNIDAVCEDDC
                     WITDPGNYDIHTIHASYLFPNVMDMKNFNIYLGAYASWVEANPNNGDNSEDARYGGRL
                     RFKYFF"
     gene            complement(1774..2289)
                     /gene="luxS"
                     /locus_tag="MOX77_002508"
     CDS             complement(1774..2289)
                     /gene="luxS"
                     /locus_tag="MOX77_002508"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008458247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HCA3358009.1"
                     /translation="MPLLDSFAVDHTRMQAPAVRVAKTMNTPHGDAITVFDLRFCIPN
                     KEVMPEKGIHTLEHLFAGFMRDHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVAD
                     AWKAAMADVLKVQDQNQIPELNVYQCGTYQMHSLSEAQDIARHILERDVRVNSNKELA
                     LPKEKLQELHI"
     gene            complement(2439..3995)
                     /gene="gshA"
                     /locus_tag="MOX77_002509"
     CDS             complement(2439..3995)
                     /gene="gshA"
                     /locus_tag="MOX77_002509"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HCA3358010.1"
                     /translation="MIPDVSQALAWLEKHPQALKGIQRGLERETLRVNADGTLATTVH
                     PEALGSALTHKWITTDFAEALLEFITPVDGDIQHMLTFMRDLHRYTARKLGDERMWPL
                     SMPCYIAEGQDIELAQYGTSNTGRFKTLYREGLKNRYGALMQTISGVHYNFSLPMAFW
                     QAKCGVTEGEAAKEKISAGYFRLIRNYYRFGWVIPYLFGASPAICSSFLQGKPTTLPF
                     EKTDCGMYYLPYATSLRLSDLGYTNKSQSNLGITFNDLHEYVAGLKRAIKTPSEEYAR
                     IGVEKDGKRLQINSNVLQIENELYAPIRPKRVTRSGESPSDALLRGGIEYIEVRSLDI
                     NPFSPIGVDEQQVRFLDLFMVWCVLADAPEMSSDELLCTRTNWNRVILEGRKPGLTLG
                     IGCETAQFPLPKVGKDLFRDLKRVAQTLDSIHGGEEYQKVCDELVACFDNPELTFSAR
                     ILRSMIDEGIGGTGKAFGEAYRNLLREEPLEILQEEEFIAERDASVRRQQEIEAADTE
                     PFAAWLAKHA"
     gene            complement(4072..4497)
                     /locus_tag="MOX77_002510"
     CDS             complement(4072..4497)
                     /locus_tag="MOX77_002510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HCA3358011.1"
                     /translation="MSDGLSLLSLFASSFLSATLLPGNSEVVLVAMLVSGVSHPWVLV
                     LTATMGNSLGGVTNVILGRFFPLRKTSRWQEKATGWLKRYGAATLLLSWMPVIGDLLC
                     LLAGWMRIPWGRTIFFLCLGKALRYVALAAATVQGMMWW"
     gene            complement(4494..5060)
                     /gene="yqaB"
                     /locus_tag="MOX77_002511"
     CDS             complement(4494..5060)
                     /gene="yqaB"
                     /locus_tag="MOX77_002511"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-1-phosphate/6-phosphogluconate
                     phosphatase"
                     /protein_id="HCA3358012.1"
                     /translation="MYARYAGLIFDMDGTLLDTEPTHRKAWREVLGRYGLRFDEQAMV
                     ALNGSPTWLIAQSIIELNHADLDPLSLAREKTDAVKSILLDCVEPLPLVEVVKAWHGR
                     RPMSVGTGSESAIAEALLAHLGLRRYFDAVVAADHVQHHKPAPDTFLLCAQRMGVMPT
                     QCVVFEDADFGLQAARAAGMDAVDVRLL"
     gene            complement(5431..5507)
                     /locus_tag="MOX77_002512"
     tRNA            complement(5431..5507)
                     /locus_tag="MOX77_002512"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5471..5473),aa:Arg,seq:acg)
     gene            complement(5704..5780)
                     /locus_tag="MOX77_002513"
     tRNA            complement(5704..5780)
                     /locus_tag="MOX77_002513"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5744..5746),aa:Arg,seq:acg)
     gene            complement(5843..5919)
                     /locus_tag="MOX77_002514"
     tRNA            complement(5843..5919)
                     /locus_tag="MOX77_002514"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5883..5885),aa:Arg,seq:acg)
     gene            complement(5982..6059)
                     /locus_tag="MOX77_002515"
     tRNA            complement(5982..6059)
                     /locus_tag="MOX77_002515"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6022..6024),aa:Arg,seq:acg)
     gene            complement(6063..6155)
                     /locus_tag="MOX77_002516"
     tRNA            complement(6063..6155)
                     /locus_tag="MOX77_002516"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6119..6121),aa:Ser,seq:gct)
     gene            complement(6459..6644)
                     /gene="csrA"
                     /locus_tag="MOX77_002517"
     CDS             complement(6459..6644)
                     /gene="csrA"
                     /locus_tag="MOX77_002517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001774971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon storage regulator CsrA"
                     /protein_id="HCA3358013.1"
                     /translation="MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHR
                     EEIYQRIQAEKSQQSSY"
     gene            complement(6879..9509)
                     /gene="alaS"
                     /locus_tag="MOX77_002518"
     CDS             complement(6879..9509)
                     /gene="alaS"
                     /locus_tag="MOX77_002518"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HCA3358014.1"
                     /translation="MSKSTAEIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGM
                     NQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDY
                     FKHDAIQFAWELLTGENWFALPKERLWVTVYETDDEAYEIWEKEVGIPRERIIRIGDN
                     KGAPYASDNFWQMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQ
                     FNRQADGTMEPLPKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGSTDL
                     GNKSLRVIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYKL
                     VGPLIEVMGSAGEELKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDTLDG
                     ETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAMI
                     RVDSASEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQVGD
                     KGELKGAGFTFAVDDTQKYGQAIGHLGKLSAGALKVGDAVQADVDEARRARIRLNHSA
                     THLMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIREVEDLVNAQIRRNL
                     PIETNIMDLDAAKAKGAMALFGEKYDERVRVLSMGDFSTELCGGTHASRTGDIGLFRI
                     ISESGTAAGIRRIEAVTGEGAMATVHAQSDRLNDIAHLLKGDSQNLGDKVRAVLERTR
                     QLEKELQQLKDQAAAQESANLSSKAVDLNGVKLLVSELAGIEPKMLRTMVDDLKNQLG
                     STVIVLATVVEGKVSLIAGVSKDVTDRVKAGELIGMVAQQVGGKGGGRPDMAQAGGTD
                     AAALPAALASVQGWVSAKLQ"
     gene            complement(9745..10245)
                     /gene="recX"
                     /locus_tag="MOX77_002519"
     CDS             complement(9745..10245)
                     /gene="recX"
                     /locus_tag="MOX77_002519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination regulator RecX"
                     /protein_id="HCA3358015.1"
                     /translation="MSEPTSRRPAYARLLDRAVRILAVRDHSEQELRRKLSAPVMGKN
                     GPEEIDATADDYERVIAWCHEHHYLDDERFVMRFIASRSRKGYGPARIRQELNQKGIS
                     RESTEKAMRECEIDWSEMAREQAVRKYGEPLPSNFSEKVKVQRFLLYRGYLMDDIQQI
                     WRNFAD"
     gene            complement(10362..11423)
                     /gene="recA"
                     /locus_tag="MOX77_002520"
     CDS             complement(10362..11423)
                     /gene="recA"
                     /locus_tag="MOX77_002520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HCA3358016.1"
                     /translation="MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTG
                     SLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDP
                     VYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEI
                     GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKF
                     YASVRLDIRRIGAVKEGDNVVGSETRVKVVKNKIAAPFKQAEFQILYGEGINFYGELV
                     DLGVKEKLIEKAGAWYSYNGEKIGQGKANATTWLKENPATAKEIEKRVRELLLSNQNA
                     TPDFAVDDSEGVAETNEDF"
     gene            complement(11508..12005)
                     /gene="pncC"
                     /locus_tag="MOX77_002521"
     CDS             complement(11508..12005)
                     /gene="pncC"
                     /locus_tag="MOX77_002521"
                     /EC_number="3.5.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamide-nucleotide amidase"
                     /protein_id="HCA3358017.1"
                     /translation="MTDSELMRLSEQVGLALKARGATVTTAESCTGGWLAKAITDIAG
                     SSAWFERGFVTYSNEAKAQMIGVREETLAQHGAVSESVVVEMAIGALKAARADFAVAI
                     SGIAGPDGGSEEKPVGTVWFAFASVSGEGITRRECFSGDRESVRRQATTYALQTLWQQ
                     FLQNT"
     gene            complement(12471..13550)
                     /gene="mltB"
                     /locus_tag="MOX77_002522"
     CDS             complement(12471..13550)
                     /gene="mltB"
                     /locus_tag="MOX77_002522"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase B"
                     /protein_id="HCA3358018.1"
                     /translation="MFKRRYVALLPLCVLLAACSSTPKSSETQATTGTPSGGFLLEPQ
                     HNVMQMGGDFANNPNAQQFIDKMVSKHGFDRQQLQEILSQSKRLDYVLRLMDRQAPTT
                     QPPAGPNGAWLRYRKQFITPDNVQNGVAFWNQYEDALNRAWQVYGVPPEIIVGIIGVE
                     TRWGRIMGKTRILDALATLSFNYPRRAEYFSGELETFLLMARDEQDDPLNLKGSFAGA
                     MGYGQFMPSSYKEYAVDFNGDGHINLWDPVDAIGSVANYFKAHGWVKGDMVAVPASGQ
                     APGLANGFKTKYSISQLAAAGLTPQQSLGNHQEASLLRLDIGTGYQYWYGLPNFYTIT
                     RYNHSTHYAMAVWQLGQAVALARVR"
     gene            13805..14368
                     /gene="srlA"
                     /locus_tag="MOX77_002523"
                     /gene_synonym="gutA"
     CDS             13805..14368
                     /gene="srlA"
                     /locus_tag="MOX77_002523"
                     /gene_synonym="gutA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIC"
                     /protein_id="HCA3358019.1"
                     /translation="MIETITHGAEWFIGLFQKGGEVFTGMVTGILPLLISLLVIMNAL
                     INFIGQQRIERFAQRCAGNPLSRYLLLPFIGTFVFCNPMTLSLGRFMPEKYKPSYYAA
                     ASYSCHSMNGLFPHINPGELFVYLGIASGLTTLGLPLGPLAVSYLLVGLVTNFFRGWV
                     TDLTTAIFEKKMGIQLEQKVHLTGAVS"
     gene            14365..15336
                     /locus_tag="MOX77_002524"
     CDS             14365..15336
                     /locus_tag="MOX77_002524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIB"
                     /protein_id="HCA3358020.1"
                     /translation="MTRVRIEKGAGGWGGPLELDVTPGKKIVYITAGTRPAIVDKLAQ
                     LTGWQAVDGFKEGEPPEAEIGAAIIDCGGTLRCGIYPKRRIPTINIHSTGKSGPLAQY
                     IVEDIYVSGVKEENITLVGETSARPQPAKTTLGRDYDTSKKITEQSDGLLAKVGMGMG
                     SAVAVLFQSGRDTIDTVLKTILPFMAFVSALIGIIMASGLGDWIAHGLAPLASHPLGL
                     VTLALICSFPLLSPFLGPGAVIAQVIGVLIGVQIGLGNIPPHLALPALFAINAQAACD
                     FIPVGLSLAEAKQDTVRVGVPSVLVGRFLTGAPTVLIAWFVSGFIYQ"
     gene            15348..15710
                     /gene="srlB"
                     /locus_tag="MOX77_002525"
                     /gene_synonym="gutB"
     CDS             15348..15710
                     /gene="srlB"
                     /locus_tag="MOX77_002525"
                     /gene_synonym="gutB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIA"
                     /protein_id="HCA3358021.1"
                     /translation="MSVIYQTTITRIGQSAMEALGEKMLITFREGAPADIEEFCFIHC
                     HGELTGALQPGARCELGQHCYPVTAVGSVAEQNLRELGHITLRFDGLREAEFPGTVHV
                     AGPVPDDIAPGCILTFVA"
     gene            15722..16501
                     /gene="srlD"
                     /locus_tag="MOX77_002526"
     CDS             15722..16501
                     /gene="srlD"
                     /locus_tag="MOX77_002526"
                     /EC_number="1.1.1.140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sorbitol-6-phosphate dehydrogenase"
                     /protein_id="HCA3358022.1"
                     /translation="MNQVAVVIGGGQTLGAFLCRGLAEEGYRVAVVDIQSDKAANVAQ
                     EINADFGEGMAYGFGADATSEQSVLALSRGVDEIFGRVDLLVYSAGIAKAAFISDFQL
                     GDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFG
                     GVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYATKLCIKPDEVEQYYIDK
                     VPLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGGQVMF"
     gene            16578..16937
                     /gene="gutM"
                     /locus_tag="MOX77_002527"
     CDS             16578..16937
                     /gene="gutM"
                     /locus_tag="MOX77_002527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator GutM"
                     /protein_id="HCA3358023.1"
                     /translation="MVSTLITVAVIAWCAQLALGGWQISRFNRAFDKLSQQGRVGVGR
                     SGGRFKPRVVVAVALDEQQRVTDTLLMKGLTVFARPVKIAAMQGKHLHELQPDVIFPH
                     DSLAQNALSLALKLKHG"
     gene            17136..17909
                     /gene="srlR"
                     /locus_tag="MOX77_002528"
                     /gene_synonym="gutR"
     CDS             17136..17909
                     /gene="srlR"
                     /locus_tag="MOX77_002528"
                     /gene_synonym="gutR"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucitol operon DNA-binding transcriptional
                     repressor SrlR"
                     /protein_id="HCA3358024.1"
                     /translation="MKPRQRQAAILEHLQKQGKCSVEELAQYFDTTGTTIRKDLVILE
                     NAGTVIRTYGGVVLNKEESDPPIDHKTLINTHKKALIAAAAVKYIHDGDSIILDAGST
                     VLQMVPLLSRFSNITVMTNSLHIVNALSELDNEQTILMPGGTFRKKSASFHGQLAENA
                     FEQFSFDKLFMGTDGIDLNVGVTTFNEVYTVSNAMCNAAREVILMADSSKFGRKSPNV
                     VCSLETVDKLITDAGIDPAFRQALEAKGIEVIITGESNE"
     gene            17902..>18670
                     /gene="gutQ"
                     /locus_tag="MOX77_002529"
     CDS             17902..>18670
                     /gene="gutQ"
                     /locus_tag="MOX77_002529"
                     /EC_number="5.3.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311591.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose-5-phosphate isomerase GutQ"
                     /protein_id="HCA3358025.1"
                     /translation="MSDALLNAGRQTLMLELQEASRLPERLGDDFVRAANIIIHCEGK
                     VIVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGA
                     KELDLIIPRLEDKSVALLAMTGKPHSPLGRAAKAVLDISVEREACPMHLAPTSSTVNT
                     LMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNNVHHLMRQGDAIPQVMLATSV
                     MDAMLELSRTGLGLVAVCDEQHVVKGVFTDGDLRRWLV"
BASE COUNT         4409 a         5118 c         4648 g         4495 t
ORIGIN      
        1 gcgcactaac tatctgataa aagggatcta cggatccctt ttttagtaga ccaacaatca
       61 gaagaaatat ttgaatctca gacgcccgcc gtaacgcgca tcttcactgt tatcgccatt
      121 attcggattg gcctctaccc atgaagcata ggcgccgagg tagatgttaa agtttttcat
      181 atccatcacg ttggggaata aatatgaggc atgaatagtg tggatgtcat aattgccggg
      241 atcggtgatc cagcaatcgt cctcacaaac ggcatcgata ttggtagcat taaaggcttc
      301 gattttgtta tgcgcataga tataacccag ttcaaatcga tgccacagcg cattcacccc
      361 agcggtaaaa tctgtctcat cggtcgcatc catataagcg gtattcaggt taataactgc
      421 gccatcttcc gggtcagttt tttgaccatt ccaggtcatg gtaaaaccat agcccgtacg
      481 atctgactga tcgatccact tcccattctc ataatagcca taggcgttgt taacgacgtt
      541 actttccatc gctatcgccg ttgaaaaacg cccgttttgc caggcaataa ccggacggac
      601 gtaagccacg tttttatcgt tggttaaatc cattccgtgg tactgcttct cggtatataa
      661 cgtactgcca ttttccagca atgtgttaac ttcgaaatac cagttgtcga tggttttgct
      721 cagcaggaag ttacccccac tgtcgctacg tccccgtcct tctttcatca tatagatata
      781 gccgtaaccg tcactgtaaa gatcgttcgc tgtattcccc gaatattcaa taaatgtatc
      841 ctgattcagc gggaacatat cgtaggcttc aaaacgacca accttaattt tccagtcatt
      901 ctcacgacca aagaagaaaa cggcatcatc aaggttcatt ttcccggtca gatccgccag
      961 aggctgtaca gagaatccgg caaaattacc gttgtccagc cgctggtagc catcaaagcc
     1021 cagcaacagg cgcccgttaa tatcccagcg ttcattggtt cctgatgccc aatctttatt
     1081 cgctgacgtt ctcatcgagg tcaggctacc ggaacggctt gccgcatcca tattaaattc
     1141 gacatcgcca tagaacttaa tatcgctgaa tccggataag gtcagcttcg gcggcgtttt
     1201 atctgctgca atgggctcgg cggactggac attcaccgtc ggtgtagcgg cgacctgctg
     1261 ctgtttcagc gagcgaattt gcgcctcggc atcggatgcc cgtttttcag cattaacaac
     1321 acgttgctcc agttcagcca gacgctgctc aatagtgata tcattcgctg cccaaaggtt
     1381 atgagaaaag caagcaccga tcatcagcgc caaatattta gccttcattt tttatccctt
     1441 aagtttgatg tataccagat aagatttgct aaaaacccca tcgaccggct attagtagag
     1501 tcttgttatt acctggatat ctggcgcatt ccattatgtt tttctattaa ttatttatga
     1561 tttttagttt atgtgatcaa tacactctgg catcgtgagt tatccgcctt ttctgtttac
     1621 cagatcacat tttattattt aacaggccag gcattactta atttaaaatg tattctcgcc
     1681 gcaaatataa taaacgcaaa ttatattaag caataaaaaa ccccggccat aaaccggggt
     1741 taatttaaat actggaaccg cttaccaata agactaaata tgcaattcct gcagtttttc
     1801 tttcggcagc gccagctctt tattgctgtt cacgcgcaca tcacgctcca gaatatgacg
     1861 ggcaatgtcc tgcgcttcac tgagcgagtg catctgatac gtaccgcact ggtaaacgtt
     1921 cagctccggg atctggtttt gatcctgcac tttcagcaca tccgccatcg ccgctttcca
     1981 agcgtcggca acacgctgct cgtccggcgt gccaatcagg ctcatgtaaa agccggtgcg
     2041 gcagcccatc ggcgagatat cgataatctc aacgccgtta ccgttgaggt ggtcgcgcat
     2101 aaagccagca aacagatgct caagcgtatg aatccctttt tccggcatca cttctttgtt
     2161 cggaatgcaa aaacgcagat caaacacggt gattgcgtcg ccatgcgggg tgttcatcgt
     2221 ttttgcaacc cggaccgccg gcgcttgcat ccgggtatga tcgactgcga agctatctaa
     2281 taatggcatt tagtcacctc cgataatttt ttaaaaataa actgaactct ttgttccggg
     2341 gcgagtctga gtatatgaaa gacgcgcatt tgttatcatc atccctgttt tcagcgatga
     2401 aattttggcc actccgtgag tggccttttt cttttgggtc aggcgtgttt cgcaagccac
     2461 gcggcaaacg gctcggtatc cgccgcctca atctcctgct gacgacgtac tgaagcgtca
     2521 cgttcagcaa taaactcttc ttcctgtaaa atctccagcg gctcttcgcg taacagatta
     2581 cggtaagcct caccgaacgc tttcccagtg ccgccaatgc cttcatcaat catagaccgt
     2641 aagattcggg cagagaatgt cagttcagga ttatcaaagc aggcgaccaa ctcatcacac
     2701 accttttgat actcctctcc cccgtggata ctgtccagcg tttgcgccac gcgtttcaga
     2761 tcgcggaaga gatctttccc tactttaggc agcgggaact gcgcggtttc acagccaatc
     2821 cccagggtaa ggcccggctt acgcccttcc agaataacgc gattccagtt agtacgcgta
     2881 cataacagct catcgctact catttccggc gcatcggcca atacgcacca gaccataaac
     2941 agatcgagga agcgcacctg ttgctcgtct acgccgatcg gtgagaacgg attaatatcg
     3001 agagaacgaa cttcgatgta ctcaatacca ccacgcagaa gcgcatctga aggcgattcg
     3061 ccgctgcgcg tcacgcgctt gggacgaatg ggcgcgtaca gctcattttc aatttgcaga
     3121 acgttgctgt taatctgtag ccgcttaccg tctttttcca caccaatccg cgcgtactct
     3181 tctgacggcg ttttaatcgc ccgtttcaga cctgcaacgt attcatgtag atcgttaaac
     3241 gtaataccca gattgctttg cgacttattg gtatagccca aatcactcaa acgcagcgac
     3301 gtcgcatatg gcaggtagta catgccgcag tccgtttttt caaacggtaa tgtggttggc
     3361 ttcccttgca ggaaagagga acaaatggcc ggagacgcgc caaacagata ggggatgacc
     3421 cagccaaaac ggtaatagtt gcgaatcaga cgaaaatagc cggcagaaat tttttctttt
     3481 gccgcttcgc cttccgtaac gccgcatttc gcctgccaga acgccatcgg taatgaaaaa
     3541 ttgtaatgta cgccggaaat ggtttgcatc aaagcgccat aacgattttt cagcccttcg
     3601 cgatagagcg tcttaaagcg cccggtattt gatgtgccgt actgcgccag ctctatgtcc
     3661 tgcccttccg caatatagca gggcatactt aatggccaca tccgctcatc gcccagtttc
     3721 ctggccgtat accgatggag atcgcgcata aaggtgagca tatgctggat atcgccatcg
     3781 actggcgtaa taaactccag tagggcttcc gcaaaatctg tggtaatcca tttatgggtc
     3841 agcgctgaac ctaacgcttc aggatgaact gttgtcgcca gcgtgccatc agcattgaca
     3901 cgcagcgttt cgcgctctaa cccgcgctgt atccccttta acgcctgagg atgtttttcc
     3961 agccaggcca gagcctgtga tacgtccggg atcaaattga cctcccgcct gtccaaatcg
     4021 ttttaataag cataactgta atggcggcca tacatgccaa acctacaatt attaccacca
     4081 catcatgccc tgaaccgtcg ccgctgcgag cgcaacatag cgcagcgcct taccaagaca
     4141 caaaaaaaag atcgtccgcc cccacgggat gcgcatccat cccgctaaca ggcacaacaa
     4201 atcaccgatg accggcatcc agcttaataa tagtgtggct gcgccataac gctttagcca
     4261 gccagtcgct ttttcctgcc aacgcgacgt tttgcgcagc ggaaagaaac gcccaagaat
     4321 aacgttagtt acccctccaa ggctattacc cattgttgct gttaagacta agacccaggg
     4381 atgactgacg ccggagacca gcatagcaac caaaaccacc tcagaattac cgggtaacag
     4441 cgtcgcgctg agaaaactac tggcaaacag agacaggagc gacagtccgt cactcacaat
     4501 agtcggacat ccacggcatc cattcccgcc gcccgcgccg cctgtaaacc aaaatcggca
     4561 tcttcaaata ccacgcactg cgtcggcatg acgcccatcc gctgggcgca caataggaag
     4621 gtgtcaggcg caggtttgtg atgctgtacg tgatctgccg ccacaaccgc atcaaaataa
     4681 cgacgcagcc ccagatgcgc taacaaggct tccgcgatag cgctttcgct accggtaccg
     4741 accgacatgg gacgccgccc atgccacgct ttgaccacct caaccagcgg cagcggttct
     4801 acgcagtcca gcaggatgct ttttaccgcg tcggttttct cacgcgccag tgacagggga
     4861 tcaagatcgg catggttaag ctcaatgatt gactgggcga taagccaggt tggcgaaccg
     4921 ttaagcgcga ccattgcctg ttcatcaaaa cgaagaccat agcgccccaa aacctcacgc
     4981 cacgctttgc gatgcgtggg ttcggtatcc aggagagtac cgtccatatc aaaaatcaaa
     5041 ccagcataac gtgcgtacat cgtgttctcg caaaccgaat aaccagacag tactttatcg
     5101 caattggttg attttgtcgc taatagagat gaagaggtat attcaggata agggggaaaa
     5161 gcgattgcag ggcagtaacg tatccgggag gattactcgc ccttcgggcc gttgctgatg
     5221 caacgttatc cttctgatgc cagcggtgat taccgctatc ttatctgcat cttcatcgct
     5281 gaaagtatgg agaatatggt gcatccggga ggattactcg ccttacggct cgcccttcgg
     5341 gccgttgctg acgcaacgtt atccttcctg gtgcctgcgg tgattaccgc tatcttatcc
     5401 gcatctttat cgctgaaagt atggagaata tggtgcatcc gggaggattc gaacctccga
     5461 ccgctcggtt cgtagccgag tactctatcc agctgagcta cggatgcatt gggaaacttg
     5521 ctttactgct gatattgata ccgcggtgaa agccgtatca attaagagat ggtgtatccg
     5581 ggaggattac tcgccttacg gctcgccctt cgggccgttg ctaacgcaac gttatccttc
     5641 ctggtgccag cggtgattac cgctatctta tccgtatctt catcgctgaa agtacggaga
     5701 atatggtgca tccgggagga ttcgaacctc cgaccgctcg gttcgtagcc gagtactcta
     5761 tccagctgag ctacggatgc atcggaaaac ttgctttact gccgatattg ataccgcggt
     5821 gaaagccgta tcaagtaaga gatggtgcat ccgggaggat tcgaacctcc gaccgctcgg
     5881 ttcgtagccg agtactctat ccagctgagc tacggatgca tcgggaaact tactttactg
     5941 cagattttga taccgcggtg aaagccgtat caagtaagag atggtgcatc cgggaggatt
     6001 cgaacctccg accgctcggt tcgtagccga gtactctatc cagctgaagc tacggatgca
     6061 aatggcggtg aggcggggat tcgaaccccg gatgcagctt ttgaccgcat actcccttag
     6121 caggggagcg ccttcagcct ctcggccacc tcaccacacg cctcttacga gtgcttcgaa
     6181 gaacttgttc tgctcatcgt cgctgcgtgg cgcacatatt actttctggg acttataagt
     6241 caaacaattt ttccagagct tttatcgttt gcacacttca cgctcaatta gtctataaaa
     6301 aagccaaaaa gagtgtttta tcaacagata atttgatgac acgctggccg ccaaaagcgc
     6361 accatatcaa cagtgaggtt gaaaaaagtc atgaggggac aacgcgggcg agcgagaaga
     6421 gaggctgcgt ctcacccgaa aagtgagacg cgaaaacctt agtaactgga ctgctgggat
     6481 ttttcagcct ggatacgctg gtagatctct tcacgatgga cagaaacttc tttcggggcg
     6541 ttcacgccaa tacgcacctg gttgcccttc acccctaaaa ctgtcacggt gacctcatcg
     6601 ccaatcatga gggtctcacc aactcgacga gtcagaatca gcattctttg ctccttgaaa
     6661 gattaaaaga gtcgggtctc tctgtatccc ggcattatcc atcatataac gccaaaaagt
     6721 aagcgatgac aaacacctta ggtgtaagca gtcatggcat tacattctgt taaacctaag
     6781 tttagccgat atacaaaact tcaacctgac tttatcgttg tcgatagcgt tgacgtaaac
     6841 gccgcagcac gagctgcggc gccaacgaac gcttataatt attgcaattt tgcgctgacc
     6901 cagccttgta cactggctaa cgctgcaggc agagctgccg catccgtacc accggcttgc
     6961 gccatgtccg gacgaccgcc acccttaccg cccacctgct gagcgaccat accaatcaat
     7021 tcccctgctt taacccggtc ggtcacatcc ttcgacacgc ccgcaatcag agaaacctta
     7081 ccttcaacaa ccgttgccag tacgataacg gtagacccca gttgattttt cagatcatca
     7141 accatggttc gcagcatttt cggctcaata ccagcaagct cgctgaccag gagcttcacg
     7201 ccgttgagat cgaccgcttt actggaaaga tttgcactct cctgcgctgc ggcctggtcc
     7261 ttcaactgct gcaactcttt ttccagctga cgcgtacgtt ccagcacggc acgcactttg
     7321 tcgcccagat tctggctgtc gcccttcagc agatgcgcaa tatcgtttaa gcgatcgctt
     7381 tgcgcgtgaa cggtggccat agcgccttca ccggttaccg cctcaatacg acgaatgccc
     7441 gctgcggtgc cggactcaga gataatacgg aatagaccga tatcaccggt acgactggcg
     7501 tgagtaccgc cgcacagttc ggtagagaaa tcgcccatgc tcagaacgcg tacacgttcg
     7561 tcgtatttct cgccaaacag cgccatggcc cctttcgcct tcgccgcgtc gagatccatg
     7621 atgttcgttt caatcggcag gttgcggcga atttgcgcat tcaccaaatc ttcaacctca
     7681 cgaatctccg acggcttcat cgcttcattg tgcgagaagt cgaagcgcag cactttatcg
     7741 ctaaccagcg aacctttctg cgcaacgtgt gtcccaagca cctggcgcaa cgccgcgtgc
     7801 atcaggtgcg tggcggagtg gttcagacgg atacgtgcgc ggcgcgcttc atctacgtca
     7861 gcctgtaccg catcgcccac tttcagagcg cccgcagaca atttgccgag gtgaccaatc
     7921 gcctgaccat atttttgcgt gtcgtccaca gcgaaagtaa atccagcgcc tttcagctcg
     7981 cctttatcgc caacctgacc gcctgattcc gcatagaatg gggtctgatc cagcacgaca
     8041 acagcttcct gtcccgcgtt aatcgcttca accgctttac catcgacaaa cagcgcagtc
     8101 actttgccgt tcagttccag atggtcataa cctttaaatt cagaagcgct gtcaacgcgg
     8161 atcatcgcgt tgtagtccgc gccaaaaccg ctagcttcgc gcgcgcgacg gcgttgctct
     8221 tccatggcgg cttcaaaacc ggcttcgtcg actttgatgt tgcgctcacg gcagacgtcc
     8281 gccgttagat cgaccgggaa accataagta tcatacagac ggaaagcggt ttcgccgtcc
     8341 agggtgtcgc cctgcaattt cgccagttct tcatccagca gcgccagacc gcgctccagc
     8401 gtacgagcga actgctcttc ttccgttttc agaacctgct cgacctgcgc ctgctgacgt
     8461 ttcaactctt cgcctgcgga gcccattacc tcaatcagcg gcccaaccag cttgtagaag
     8521 aaggtctctt ttgcgcccag catgttgccg tgacgaaccg cgcgacgaat aatgcgacgc
     8581 agcacatagc cacggttttc attcgacggc agcacgccat cggcaaccag gaatgcgcaa
     8641 gaacggatgt ggtcggcgat aacgcgcagc gatttattac ccaaatcggt ggagccggtg
     8701 actttcgcta ccgcttcaat caacgtgcgg aacaggtcga tgtcatagtt agagttaacg
     8761 tgttgcagta ccgcggcaat acgctccagc cccataccgg tatctacaga cggtttcggc
     8821 aatggttcca tcgtcccgtc agcctgacgg ttgaactgca taaagacgat gttccagatt
     8881 tcaatatagc gatcgccgtc ttcttccggg cttcccggag ggccgcccca gatgtggtcg
     8941 ccatgatcgt agaagatttc ggtgcacgga ccgcagggac cggtgtcgcc catctgccag
     9001 aagttatccg atgcgtatgg cgcgccttta ttgtcaccga tacggatgat acgctcgcgc
     9061 gggatgccga cttctttttc ccagatctca taggcttcgt cgtcggtttc atagacggtg
     9121 acccataagc gctcttttgg cagagcaaac cagttttcgc cggtcagtaa ttcccatgcg
     9181 aactgaatgg cgtcgtgttt gaaataatcg ccgaagctga agttgcccag catttcgaag
     9241 aaagtatggt gacgtgcagt gtatccgacg ttttccagat cgttgtgttt accccccgcg
     9301 cgtacgcaac gctgggaagt ggttgcacgg gaataattac gtttatcgag cccaaggaaa
     9361 acatccttga actggttcat cccggcattg gtaaacaaca gagtggggtc attgttaggc
     9421 accagggaac tgctggcaac tacctgatgc cctttactat ggaaaaagtc gagaaacgcc
     9481 tgacggatct cagcggtgct cttgctcata attatcctga aatcaagcta cactccatcc
     9541 ttcaggccgc ctctgcgttg gctgcgagtt tcccggtcac gcgttcccga ggctcacttg
     9601 ccgctttaat gcggcttgaa tgattttgtg tatttaagga atattcgtcg cagacgctgt
     9661 tcgccgttaa gcaacccgcg tccagacgga aaaagtggga ataagataag ttttctttac
     9721 cgggaagtaa aatcccgtat gcgctcaatc tgcaaaattt cgccatattt gctggatatc
     9781 gtccatcaga tacccgcgat agagcaaaaa gcgctgtacc ttaacctttt ctgaaaagtt
     9841 tgaagggagc ggctcgccat atttgcgaac ggcctgttca cgtgccattt cactccagtc
     9901 aatttcacat tctcgcatcg ctttttcagt cgattcacgg gaaatgcctt tctgattcaa
     9961 ctcctggcga atacgcgccg ggccatagcc tttgcggcta cgactggcga taaagcgcat
    10021 cacgaagcgc tcgtcatcaa gatagtggtg ttcgtggcac caggcgatca cgcgttcata
    10081 atcgtctgcc gtcgcatcaa tctcttccgg cccatttttg cccatcaccg gcgcggagag
    10141 tttacgccgt agttcctgct cgctgtgatc gcggacagca agaatacgta ccgcacgatc
    10201 aaggagacga gcataagcgg gacggcgcga tgtgggttca ctcataaaaa accttaacag
    10261 gggtaaatgc caaaagggcc gcataaatgc agcccttgat ggtaatttaa cgttttgctg
    10321 aatggcggct tcgttttgtc cgacccacca tcacctgatg attaaaaatc ttcgttggtt
    10381 tctgcaacgc cttcgctatc gtcaacggcg aaatcgggcg tggcattctg attactcaac
    10441 agtaattcac gcactctttt ctcgatctct ttcgctgttg ccgggttctc tttcagccag
    10501 gtagtcgcgt tcgctttacc ctggccaatc ttctcgccgt tgtagctgta ccatgcgccc
    10561 gctttctcga tcagcttctc tttcacgccc aggtcaacca gttcgccata gaagttgatg
    10621 ccttcgccgt agaggatctg gaactcggcc tgcttaaacg gcgcggcgat tttgtttttc
    10681 accactttca cacgcgtttc gctacccacg acattatcgc cttctttcac cgcgccaata
    10741 cgacggatat caagacgaac ggaggcgtag aatttcagcg cgttaccgcc ggtggtggtt
    10801 tccgggttac caaacatcac gccaattttc atacggatct ggttgatgaa gatcagcagc
    10861 gtattggact gtttcaggtt ccccgccagc ttacgcatcg cctggctcat catacgcgcc
    10921 gcgaggccca tgtgagagtc gccgatttcg ccttcgattt ccgctttcgg cgttagcgcc
    10981 gctacggagt cgaccacaat gacgtccacc gcgcctgaac gcgccagcgc gtcacagatt
    11041 tccagcgcct gctcgccggt atccggctga gaacagagca ggttatcgat atcgacgccc
    11101 agcttgcgtg cgtaaacagg gtcaagcgcg tgttccgcat cgataaacgc acaggtttta
    11161 ccttcacgct gcgcagcggc aatcacctgc agcgtcaggg tcgttttacc ggaagattcc
    11221 ggcccgtaaa tttcgacgat acgccccatc ggcagaccgc ccgcaccgag tgcgatatcc
    11281 agtgaaagcg aaccggtgga gatagtttcc acatccatag aacggtcttc acccagacgc
    11341 atgatggagc ctttaccaaa ttgcttttca atttggccca gtgctgccgc caacgctttc
    11401 tgtttgtttt cgtcgatagc cattattact cctgtcatgc aacttggtat tgaaccggat
    11461 agtgaattcg tactgttgaa gcaattatac tgtatgctca tacagtatca agtgttttgt
    11521 agaaattgtt gccacagggt ttgtagcgcg tatgtcgtcg cctgtcgacg caccgattca
    11581 cggtcgccgc tgaagcattc ccgacgcgta atcccttctc cactgacgct ggcgaaagca
    11641 aaccacaccg taccaaccgg cttttcttca ctgccgccat ccggcccggc aatcccgcta
    11701 atagcgacag caaaatcggc gcgagcggcc ttcagcgccc cgatcgccat ttcgaccact
    11761 acggattcgc tgaccgcgcc atgctgcgcc agcgtctctt cacgcacgcc aatcatctgc
    11821 gctttggctt cattactata ggtgacaaag ccgcgttcaa accaggcgga acttccggcg
    11881 atgtcggtaa tggctttcgc cagccagccg ccggtacagg actccgctgt cgttacggtc
    11941 gccccgcgcg cttttaacgc cagcccgacc tgttcgctaa gccgcatcag ttcactgtca
    12001 gtcatcatga cctctgtcag ttagaaatcc tgccgcacaa gatagcactt tctcaccaga
    12061 gatggggacg agctgtcgat tttacgagtc ggattccgaa aaaatgccag caggttattt
    12121 atgcagaatg aaagaggtag cacatgacta aatagcagta ctatgtcgct aaatttacac
    12181 gcacggagag aaagcaagga tgtcactcaa aaaaacggaa agcgcacagc acaaactgaa
    12241 acaaacctgt caactacggc tgtggttaat tgtgggtgga gtatgttcat taggaatggg
    12301 agtactgaat atattgtcgt caggctattt tgaaccgtat gacggcggtc aaattatctt
    12361 aggcctggga tgtctgggtt atagtctggc actatcaaaa aagatatccc acttgcaagc
    12421 ccaaaaagcc atagtaatag cggagggggg ctcccctccc taagcgtaaa ttagcgcacc
    12481 cgcgccagcg ctaccgcctg ccccagttgc caaaccgcca tcgcataatg cgtgctgtgg
    12541 ttatatcggg taatggtgta gaagttcggc aggccgtacc agtactggta tcccgtaccg
    12601 atatccagac gcagcaggct ggcttcctga tgattgccca acgattgctg cggcgttaag
    12661 cctgcggcgg caagctgaga gatgctgtat tttgttttga aaccattcgc caacccaggc
    12721 gcctgaccac tcgccggcac cgcaaccata tcgcctttca cccaaccatg cgccttgaaa
    12781 tagttcgcca cgctgccgat ggcatctacc ggatcccaca agttaatgtg cccatcgcca
    12841 ttgaaatcga ccgcatattc tttataggaa gacggcataa actggccgta gcccatcgcg
    12901 ccggcaaagg aacctttcag attgagcgga tcgtcttgct catcgcgcgc catgagcagg
    12961 aaggtttcca gctcgccgga gaaatattcc gcccggcgcg gatagttaaa tgacagcgtc
    13021 gccagcgcgt ccagaatccg tgttttcccc atgatacgtc cccagcgggt ttccacgccg
    13081 atgatgccca caatgatttc cggcggtacg ccgtatacct gccaggcgcg gttcagcgcg
    13141 tcttcatact gattccagaa cgcgacgccg ttttgcacgt tatccggcgt aataaattgt
    13201 ttgcggtagc gcaaccaggc gccatttggt ccggcgggcg gctgagtggt cggcgcttgt
    13261 ctgtccatca gacgcagaac gtaatccagt cttttagact gcgagaggat ctcttgcagc
    13321 tgctgacggt cgaaaccgtg tttactgacc attttatcaa tgaactgctg cgcattaggg
    13381 ttgttggcga agtcgccgcc catttgcatg acgttatgct gcggctcaag caggaagccg
    13441 ccggaaggcg tgcccgtcgt cgcttgagtc tcggaagatt ttggcgtgct gctacaggca
    13501 gcaagcaata cgcaaagtgg aagtaacgct acataacgac gcttgaacat gagacatcca
    13561 ttaaacaaat tcagccaggg agaagtatgg taaagcatcc ccccgccgca caaggaagcg
    13621 gcacaagaga ataaatcacc tttcccctct ctccagtttg tatctgctcc tccactccct
    13681 caatctttca agttaaaata tttttctttt attttgagat caaaataaca cttttatacc
    13741 tttcaacatg attacaatga gcaggaagtt agcaagaaaa ctaaaaaccc tacaggagag
    13801 aacaatgatc gaaaccatta cacatggtgc ggagtggttc atcgggttat tccagaaagg
    13861 cggtgaggtg tttaccggta tggtgacagg tattcttccg ctactgataa gcctgctggt
    13921 tatcatgaat gcgctcatca attttatcgg ccagcagcgt attgagcgtt ttgcccaacg
    13981 ctgcgccgga aatccgctat cccgctacct gcttttaccg tttatcggga cgtttgtttt
    14041 ttgtaatccg atgaccctga gtctgggacg ctttatgccg gagaagtaca agccgagcta
    14101 ttacgcggcg gcctcctata gctgtcactc catgaacggt ctgtttccgc atatcaatcc
    14161 cggcgaactg tttgtttatc tgggtatcgc cagcggactc accacgttag ggcttcctct
    14221 cggcccgctc gcggtgagct atctgctggt aggtctggtg acgaacttct tccgcggttg
    14281 ggtcaccgat ctcaccaccg ctatttttga gaaaaaaatg gggattcaac ttgagcagaa
    14341 agttcatctg acaggagcgg tatcatgaca cgggttcgca ttgagaaagg tgccggcggc
    14401 tggggcggcc cgcttgaact ggacgttacg ccaggcaaaa agatcgtcta tatcacagcc
    14461 ggtacgcgcc cggcgatcgt cgacaaactg gcgcaactaa caggctggca agcggtggac
    14521 ggctttaaag aaggcgaacc gccggaagcg gagatcggcg cggccattat cgactgcggc
    14581 ggtacgctgc gctgcggtat ctacccgaaa cgccggattc caaccattaa tattcactcg
    14641 acgggtaagt ccggcccact ggcgcagtat attgttgaag atatttatgt ctccggcgta
    14701 aaagaagaaa acattactct agtcggcgaa acatctgcca gaccccagcc tgccaaaacg
    14761 acattaggac gtgactacga caccagcaaa aaaatcaccg agcagagcga cgggctgctg
    14821 gcaaaagtcg gtatgggaat gggttctgcc gtggcggtac tgttccagtc cggtcgcgac
    14881 accattgata cggtcctgaa aacaattctg ccgtttatgg cgttcgtttc ggcgctaatc
    14941 ggcatcatta tggcctcagg tcttggcgac tggatcgccc acggcctggc gccattagcc
    15001 agccatccac tggggctggt gacgctggca ttgatctgct ctttcccgct gctgtcgccc
    15061 tttctcggcc caggcgcggt tatcgctcag gttattggcg ttctgatcgg cgttcagata
    15121 ggtctgggca atatcccccc gcatctggcg ctgcccgccc tgttcgcgat taacgcgcag
    15181 gcggcctgcg actttatccc ggtcggcctg tcactggcgg aagcgaaaca agacaccgtt
    15241 cgcgtcggcg taccttctgt gctggtcgga cgcttcctga ccggcgcgcc cacggtactt
    15301 atcgcctggt ttgtttccgg ctttatctat caataagagg ttcagacatg agcgtgattt
    15361 atcaaaccac catcacccgc atcggccaga gcgcgatgga ggcgctcggc gaaaagatgc
    15421 tgattacgtt tcgggaaggc gcgccggcgg atatcgaaga attttgcttc atccattgtc
    15481 atggcgaact gaccggcgcg ctgcagcctg gcgcgcggtg tgaactgggc caacattgct
    15541 atccggtcac ggcggtcggc agcgtagccg agcaaaacct gcgtgaactg gggcatatca
    15601 ccttgcgctt tgatggtctg cgcgaagcgg aatttcccgg caccgtacac gttgcggggc
    15661 ctgtaccgga cgatatcgcg ccgggctgta ttttgacgtt tgtcgcttaa ggagaaaaaa
    15721 catgaatcaa gttgccgttg tcattggcgg aggccagacc ctgggggcat tcctttgccg
    15781 tgggcttgca gaagaaggat accgcgtggc ggtcgttgat attcaaagcg ataaagccgc
    15841 gaatgtcgcc caggaaatta acgccgattt tggcgaaggt atggcctacg gttttggcgc
    15901 cgacgccacc agcgagcaga gcgtgctggc gctgtcccgc ggcgtagacg agattttcgg
    15961 gcgcgtcgat ctgctggttt acagcgcggg tatcgccaaa gcggcgttta tcagcgattt
    16021 ccagttgggc gattttgacc gctcgctaca ggtgaatctg gtgggctatt tcctctgcgc
    16081 ccgtgagttt tcccgcctga tgatccgcga cggcattcag gggcgcatta ttcagattaa
    16141 ctctaaatcc ggcaaagtgg gcagtaaaca caactccggc tacagcgcgg cgaaattcgg
    16201 cggcgtgggg ttaacccagt ctctggcgct ggacctggcg gaatacggca ttaccgtaca
    16261 ctcgctgatg ctcggcaacc tgttgaaatc gccgatgttc cagtcattgc tgccgcaata
    16321 cgccactaaa ctgtgcatta agcccgacga ggtggaacag tattacattg ataaagtacc
    16381 gctcaaacgc gggtgtgatt atcaggatgt gctgaacatg ctgctatttt atgccagccc
    16441 gaaagcgtct tattgcaccg ggcagtcgat caacgtaacc ggcggtcaag tgatgttctg
    16501 accgtgaatt gccggatggc gccgtaggcc ggataagacg gttacgccgc catcaggcaa
    16561 aacaacagga gcacattatg gtttccactc tgattaccgt cgccgttatc gcctggtgtg
    16621 cacaactggc gctgggcggc tggcagattt cccgctttaa tcgggctttc gataaactta
    16681 gccaacaggg acgggtcggc gtcgggcgct ccggcgggcg ttttaagccc cgggtggtgg
    16741 ttgccgtggc gctggacgaa cagcagcggg tgacggacac tttattgatg aaaggcctta
    16801 cggtattcgc cagaccggtt aaaattgccg caatgcaagg aaaacatttg catgaattac
    16861 agcctgatgt gatctttccc catgattcgc tcgcgcagaa tgcactatca ttggcgctta
    16921 aactgaaaca tgggtaattt cgttgtgaat gcgaatagct tgcgaaatta tcattttgca
    16981 acctataccc taaataattc gagttgcagg aaggcggcga cgcagcgaat cccctggaac
    17041 gtacatcaat acgtgaccgg ggtgagcgag gaaagccaac gcacatgcag cgtgaagtat
    17101 tacgggtaaa tacataagtc agggtaatca cgcctatgaa acctcgtcag cgtcaggccg
    17161 cgattctgga gcacctgcaa aaacagggaa aatgctcggt tgaagaactg gcccagtact
    17221 ttgacacgac aggcaccact atccgtaaag atctggtcat tctggaaaat gccggaaccg
    17281 tcatccgcac ctatggcggc gtggtgttga ataaagaaga gtccgatccg cctattgatc
    17341 acaaaacgct tatcaacacc cacaaaaaag cgctgatagc cgcagccgct gtgaaatata
    17401 tccatgatgg cgattccatt attctggacg ccggaagtac cgtgttacag atggtgccgt
    17461 tgctttcgcg ttttagcaac atcacggtga tgaccaacag cctccatatt gttaacgcgc
    17521 tatcggaact ggacaacgaa caaactatcc tgatgcccgg cggcaccttc cgtaaaaaat
    17581 cggcgtcgtt tcacggtcaa ctggcggaaa acgcctttga gcaattcagc tttgataaac
    17641 ttttcatggg aactgacggt attgacctga atgtcggtgt gaccacgttc aatgaggttt
    17701 acaccgtcag taacgcaatg tgcaatgcag cacgcgaggt gattctgatg gcggactcct
    17761 caaaatttgg tcgtaaaagc cccaatgtgg tgtgcagtct ggaaaccgtc gacaaactga
    17821 tcacggacgc ggggatcgat ccggcatttc gtcaggcgct ggaagcaaaa gggattgaag
    17881 taatcataac cggagaaagc aatgagtgat gcactactaa acgcgggccg tcagacctta
    17941 atgctggagc tacaggaagc cagccgtctg ccggagcgtc tgggcgatga ttttgtccgc
    18001 gccgccaata tcattattca ctgtgaaggc aaagtgatcg tttccggtat tggtaaatca
    18061 ggtcatattg gtaaaaaaat cgccgcgacg cttgccagta ccggtactcc cgcttttttt
    18121 gttcatccgg cggaagcact gcatggcgat ctggggatga ttgaaagccg cgacgtgatg
    18181 ttatttatct cctattccgg cggcgcaaaa gaactcgacc tcatcatccc gcgtctggaa
    18241 gataaatccg tcgcgctgct ggcgatgacc ggtaaacctc actctccgct ggggcgagcg
    18301 gcaaaagccg ttctggatat ttccgtcgag cgtgaagcct gtccgatgca tctggcgccg
    18361 acatccagta ccgtcaatac gctgatgatg ggcgatgcgc tggcgatggc ggtcatgcag
    18421 gcgcgcggtt ttaacgaaga agatttcgcc cgttcgcatc cggctggcgc actgggcgcg
    18481 cgtttgctca ataatgtgca tcacctgatg cgccagggcg atgcaatacc gcaggtgatg
    18541 ctcgccacca gcgtgatgga tgccatgctg gaacttagcc gtaccgggct ggggctggtg
    18601 gcggtttgcg atgagcaaca tgttgtgaaa ggcgtcttta ccgacggcga cctgcgtcgc
    18661 tggctggtag
//
LOCUS       DAGWFR010000071        18359 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.072, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000071 DAGWFR010000000
VERSION     DAGWFR010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 18359)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18359)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18359
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.072"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..369
                     /gene="ybgF"
                     /locus_tag="MOX77_002530"
     CDS             <1..369
                     /gene="ybgF"
                     /locus_tag="MOX77_002530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system protein YbgF"
                     /protein_id="HCA3358026.1"
                     /translation="ANTDYNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYW
                     LGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQV
                     INKYPGTDGAKQAQKRLNAM"
     gene            534..606
                     /locus_tag="MOX77_002531"
     tRNA            534..606
                     /locus_tag="MOX77_002531"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:567..569,aa:Lys,seq:ttt)
     gene            752..827
                     /locus_tag="MOX77_002532"
     tRNA            752..827
                     /locus_tag="MOX77_002532"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:785..787,aa:Lys,seq:ttt)
     gene            962..1037
                     /locus_tag="MOX77_002533"
     tRNA            962..1037
                     /locus_tag="MOX77_002533"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:995..997,aa:Lys,seq:ttt)
     gene            1331..2374
                     /gene="nadA"
                     /locus_tag="MOX77_002534"
     CDS             1331..2374
                     /gene="nadA"
                     /locus_tag="MOX77_002534"
                     /EC_number="2.5.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000115355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinolinate synthase NadA"
                     /protein_id="HCA3358027.1"
                     /translation="MSVMFDSQAAIYPFPPKPTPLNDDEKQFYREKIKRLLKERNAVM
                     VAHYYTDPEIQQLAEETGGCISDSLEMARFGAKHAASTLLVAGVRFMGETAKILSPEK
                     NVLMPTLAAECSLDLGCPIDEFSAFCDAHPDRTVVVYANTSAAVKARADWVVTSSIAV
                     ELIEHLDSLGEKIIWAPDRHLGNYVQKQTRADVLCWQGACIVHDEFKTQALTRLKKIY
                     PDAAILVHPESPRSIVEMADAVGSTSQLIKAAKTLPHRQLIVATDRGIFYKMQQAVPD
                     KELLEAPTAGEGATCRSCAHCPWMAMNGLKAIAEGLEQGGAAHEIQVDAALRESALLP
                     LNRMLDFAATLRV"
     gene            2399..3118
                     /locus_tag="MOX77_002535"
     CDS             2399..3118
                     /locus_tag="MOX77_002535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamide riboside transporter PnuC"
                     /protein_id="HCA3358028.1"
                     /translation="MDFFSTHNILIHIPIGAGGYDLSWIEAVGTIAGLLCIWLASLEN
                     ISNYFFGLVNVTLFAIIFFQIQLYASLLLQLFFFAANIYGWYAWSRQTKDNEAELKIR
                     WLPLPKAMAWLAICVIAIGLMTRYIDPVFAVLTRVAVAIMQMLGLQVTMPVLQPDAFP
                     FWDSCMMVLSIVAMILMTRKYVENWLLWVIINVISVVIFALQGVYAMSLEYLILTFIA
                     VNGSRLWINSARERGSRALSR"
     gene            complement(3115..4053)
                     /gene="zitB"
                     /locus_tag="MOX77_002536"
     CDS             complement(3115..4053)
                     /gene="zitB"
                     /locus_tag="MOX77_002536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDF family zinc transporter ZitB"
                     /protein_id="HCA3358029.1"
                     /translation="MAHSHSHADSHLPKDNNARRLLFAFIVTAGFMLLEVVGGILSGS
                     LALLADAGHMLTDAAALLFALLVVQFSRRPPTVRHTFGWLRLTTLAAFVNAIALVVIT
                     LLIVWEAIERFYTPRPVAGNLMMVIAVAGLLANLFAFWILHRGSDEKNLNVRAAALHV
                     MGDLLGSVGAIVAALIIIWTGWTPADPILSILVSVLVLRSAWRLLKDSVNELLEGAPV
                     SLDINALQRHLSREIPEVRNVHHVHVWMVGEKPVMTLHAQVIPPHDHDALLERIQDFL
                     MHEYHIAHATIQMEYQMCHGPDCHLNQTPSGHVHHH"
     gene            complement(4164..4550)
                     /locus_tag="MOX77_002537"
     CDS             complement(4164..4550)
                     /locus_tag="MOX77_002537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbgS-like family protein"
                     /protein_id="HCA3358030.1"
                     /translation="MKMTKLTTLLLTATLGLASGAALAAESNAQSSNGQANSAANAGQ
                     VAPDARQNVAPNDVNNNDINTNGNTNSTMQHPDGSTMNHDGMTKDEEHKNTMCKDGRC
                     PDINKKVETGNGVNNDVNTKTDGTTQ"
     gene            4870..5922
                     /gene="aroG"
                     /locus_tag="MOX77_002538"
     CDS             4870..5922
                     /gene="aroG"
                     /locus_tag="MOX77_002538"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001109196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroG"
                     /protein_id="HCA3358031.1"
                     /translation="MNYQNDDLRIKEINELLPPVALLEKFPATENAANTVAHARKAIH
                     KILKGNDDRLLVVIGPCSIHDPAAAKEYAARLLALRDELQGELEIVMRVYFEKPRTTV
                     GWKGLINDPHMDNSFQINDGLRIARKLLLDINDSGLPAAGEFLDMITPQYLADLMSWG
                     AIGARTTESQVHRELASGLSCPVGFKNGTDGTIKVAIDAINAAGAPHCFLSVTKWGHS
                     AIVNTSGNGDCHIILRGGKAPNYSAQHVAEVKEGLIKAGLTPQVMIDFSHANSCKQFQ
                     KQMEVCADVCQQIAGGEKAIIGVMVESHLVEGNQSLESGQPLTYGKSITDACIGWEDT
                     DALLRQLSAAVKARRG"
     gene            6075..7154
                     /locus_tag="MOX77_002539"
     CDS             6075..7154
                     /locus_tag="MOX77_002539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HCA3358032.1"
                     /translation="MTCQDKSLLAPGLASTPVIPRYRQIIRKRAVLMSAIALAMMVSL
                     MVDVTCGSSGLPLSALWQALFQPEKVNAGIHVIVWDIRLPYALMALLVGMALGLAGAE
                     MQTILNNPLATPFTLGVSSAAAFGAALAIVLGIGIPGIPAAWFIPANAFIFALLSALL
                     LDGITRWTGVAASGVVLFGIALVFTFNALVAIMQFVADEDTLQGLVFWTMGSLVRASW
                     EKLGVLAVVFIAVLFCALRSAWQLTALRLGEERAMSFGVHVRRLRLLSLLRISLLSAL
                     AVAFVGPIGFIGLVAPHIARILLGEDHRFYLPGSVLIGGLVLSLASIAAKNSIPGVMV
                     PVGIVTSLVGVPFFLSIVLRHRGSL"
     gene            7154..7930
                     /locus_tag="MOX77_002540"
     CDS             7154..7930
                     /locus_tag="MOX77_002540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCA3358033.1"
                     /translation="MRRLMLRSFSAGYSTQPVIADLNVPLLPRGKITILLGPNGCGKS
                     TLLRSLAGLNNVDGEALLDGEDLMSLSFAERAQKVVFLPQSLPQGVHLHVLESIIVVL
                     RASGGRDNAQGRAQILAILEQLGITHLALQYLDQLSGGQRQLVGLAQSLIRRPELLLL
                     DEPLSALDLNYQFHVMDLVRRDTQAQNRVTIVVAHDINIALRHGDHVLMLKDGRLVAS
                     GAPETVITAERLAEVYRVRGRVERCSQGKLQVVLDGVIAV"
     gene            complement(8021..8773)
                     /gene="gpmA"
                     /locus_tag="MOX77_002541"
     CDS             complement(8021..8773)
                     /gene="gpmA"
                     /locus_tag="MOX77_002541"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000301556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase"
                     /protein_id="HCA3358034.1"
                     /translation="MAVTKLVLVRHGESQWNKENRFTGWYDVDLSEKGVSEAKAAGKL
                     LKEEGFSFDFAYTSVLKRAIHTLWNVLDELDQAWLPVEKSWKLNERHYGALQGLNKAE
                     TAEKYGDEQVKQWRRGFAVTPPELTKDDERYPGHDPRYAKLSEKELPLTESLALTIDR
                     VIPYWNDTILPRMKSGERVIIAAHGNSLRALVKYLDNMSEDEILELNIPTGVPLVYEF
                     DENFKPIKHYYLGNADEIAAKAAAVANQGKAK"
     gene            complement(8997..10037)
                     /gene="galM"
                     /locus_tag="MOX77_002542"
     CDS             complement(8997..10037)
                     /gene="galM"
                     /locus_tag="MOX77_002542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose-1-epimerase"
                     /protein_id="HCA3358035.1"
                     /translation="MLNETPALAPDGQPYRLLTLRNSAGMVVTLMDWGATLLSARIPL
                     SDGSVREALLGCASPEHYPEQTSFLGASIGRYANRIANSRYTFAGETVQLSPSQGENQ
                     LHGGPEGFDKRRWQIVNQNDRQVLFALTSDDGDQGFPGHLCATAQYRLTDDNRISITY
                     RATVDKPCPVNLTNHVYFNLDGDRTDVRQHKLQILADEYLPVDESGIPRQGLKSVANT
                     SFDFRMPKVIASEFLADDDQRKVKSYDHAFLLQTQGDGKKPAARLWSQDGKLQMMVYT
                     TAPALQFYSGNYLAGTPSRGPEPYADWQGLALESELLPDSPNHPEWPQPDCILRPGEE
                     YASLTEYQFIPF"
     gene            complement(10031..11179)
                     /gene="galK"
                     /locus_tag="MOX77_002543"
     CDS             complement(10031..11179)
                     /gene="galK"
                     /locus_tag="MOX77_002543"
                     /EC_number="2.7.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001713229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactokinase"
                     /protein_id="HCA3358036.1"
                     /translation="MNLKEKTRALFAEIFGYPATHTIQAPGRVNLIGEHTDYNDGFVL
                     PCAIDYQTVISCAPRDDRTVRVIAADYDNQVDEFSLDAPIVTHDSQQWSNYVRGVVKH
                     LQQRNNAFGGVDMVISGNVPQGAGLSSSASLEVAVGTVFQQLYHLPLDGAQIALNGQE
                     AENQFVGCNCGIMDQLISALGKKDHALLIDCRTLGAKAVSMPKGVAVVIINSNFKRTL
                     VGSEYNTRREQCETGARFFQQPALRDVSLEAFNAVASELDPVVAKRVRHVLSENARTV
                     EAASALEKGDLQRMGQLMAESHASMRDDFEITVPQIDTLVDIVKATIGDQGGVRMTGG
                     GFGGCVVALIPEDLVPAVQQAVAQQYEAKTGIKETFYVCKPSQGAGQC"
     gene            complement(11182..12228)
                     /gene="galT"
                     /locus_tag="MOX77_002544"
     CDS             complement(11182..12228)
                     /gene="galT"
                     /locus_tag="MOX77_002544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose-1-phosphate uridylyltransferase"
                     /protein_id="HCA3358037.1"
                     /translation="MTPFNPIDHPHRRYNPLTGQWVLVSPHRAKRPWQGAQETPSQQM
                     LPAHDPDCFLCAGNTRVTGDKNPDYKGTYVFTNDFAALMADTPDAPDSHDPLMRCQSA
                     RGTSRVICFSPDHSKTLPELSLPALTEIVRTWQTQTAELGKTYPWVQVFENKGAAMGC
                     SNPHPHGQVWANSFLPNEAEREDRLQKAYFAEQRPPMLVDYVQRELADGSRTVVETEH
                     WLAVVPYWAAWPFETLLLPKTHVLRITDLSDEQRDSLALALKKLTSRYDNLFQCSFPY
                     SMGWHGAPFNGEENAHWQLHAHFYPPLLRSATVRKFMVGYEMLAETQRDLTAEQAAER
                     LRAVSDIHFRESGV"
     gene            complement(12239..13255)
                     /gene="galE"
                     /locus_tag="MOX77_002545"
     CDS             complement(12239..13255)
                     /gene="galE"
                     /locus_tag="MOX77_002545"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HCA3358038.1"
                     /translation="MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVI
                     ERLGGKHPTFVEGDIRNEALITEILHDHAIDTVIHFAGLKAVGESVAKPLEYYDNNVN
                     GTLRLVSAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL
                     TDLQKAQPEWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRESLAVF
                     GNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLADKSGVHIYNLGAGVGSSVLDVVNAF
                     SKACGKPINYHFAPRRDGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHPQ
                     GYSD"
     gene            complement(13478..14386)
                     /locus_tag="MOX77_002546"
     CDS             complement(13478..14386)
                     /locus_tag="MOX77_002546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2167 domain-containing protein"
                     /protein_id="HCA3358039.1"
                     /translation="MAFRFPQIILFLLAAMLFCPSSYAEQKPTAAQEARKTAVEVAVE
                     GMSRAAVAGPTKISLGDKATLNLPEGFTWIPAKEAAVFMREIGNYVDDEYFYGLVFKK
                     EMNGFISIEYDDSGYVKDDDAKNWDADELMDNLRKGTKEANKDRIAKGIEPIEIIGWI
                     EKPTYDATNHRLIWSAAIQDIGTNEPLNEQGVNYNTYLLGREGYFSLNLVTDRGSVDH
                     EIPLAKRILSSVKFNAGQRYADFNESTDKIAEYELAALIGGIAAKKVGLLAMLGIALL
                     KFWKVTAIGVVAVGALARKLLSRKKD"
     gene            complement(14557..16032)
                     /gene="modF"
                     /locus_tag="MOX77_002547"
     CDS             complement(14557..16032)
                     /gene="modF"
                     /locus_tag="MOX77_002547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter ATP-binding protein
                     ModF"
                     /protein_id="HCA3358040.1"
                     /translation="MSSLQISQGTFRLSDTKTLHLDSLTLNAGDSWAFVGANGSGKSA
                     LARALAGELPLLTGERQCQFTRITRLSFEQLQKLVSDEWQRNNTDMLSPGEDDTGRTT
                     AEIIQDDVHHPARYAMLAQQFGISALLNRRFKYLSTGETRKALLCQALMSEPELLILD
                     EPFDGLDVTARQQLAQRLTALNQAGMTLALVLNRFDEIPDFVQFAGVLADCTLAETGT
                     TAELLQRALVAQLAHSERLTDVQLPEPDEPSARHALPDGEPRIVLNDGVVSYNDRPIL
                     HHLSWRVNPGEHWQIVGPNGAGKSTLLSLITGDHPQGYSNDLTLFGRRRGSGETIWDI
                     KKHIGYVSSSLHLDYRVSTTVRNVILSGYFDSIGIYQAVSDRQRKLAQQWLDILGIDK
                     RTADAPFHSLSWGQQRLALIVRALVKHPTVLILDEPLQGLDPLNRQLVRRFVDVLIRQ
                     GETQLLFVSHHAEDAPACITHRLEFVPEGERYKYVSGRCNN"
     gene            complement(16100..16888)
                     /gene="modE"
                     /locus_tag="MOX77_002548"
     CDS             complement(16100..16888)
                     /gene="modE"
                     /locus_tag="MOX77_002548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum-dependent transcriptional regulator"
                     /protein_id="HCA3358041.1"
                     /translation="MQAEILLTLKLQQKLFADPRRISLLKHIALSGSISQGAKDAGIS
                     YKSAWDAINDMNQLSEHMLVERATGGKGGGGAVLTRYGQRLIQLYDLLGQIQQKAFDV
                     LSDDDALPLDSLLAAISRFSLQTSARNQWFGTITARDRDQVQQHVDVLLADGKTRLKV
                     ALTAQSGERLGLEEGKEVLILLKAPWVGITRDAAVARAADNQLSGTISHIERGAEQCE
                     VLMALPDGQTLCATIPTADAATLKEGDDVIAWFNADRVIIATLC"
     gene            17017..17166
                     /locus_tag="MOX77_002549"
     CDS             17017..17166
                     /locus_tag="MOX77_002549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AcrZ family multidrug efflux pump-associated
                     protein"
                     /protein_id="HCA3358042.1"
                     /translation="MLELLKSLVFAVIMVPVVMAIILGLIYGLGEVFNIFSGIGQKDQ
                     SRQNR"
     gene            17333..18106
                     /gene="modA"
                     /locus_tag="MOX77_002550"
     CDS             17333..18106
                     /gene="modA"
                     /locus_tag="MOX77_002550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HCA3358043.1"
                     /translation="MAHSWLRLVAGATLSFVIAGHALADEGKITVFAAASLTNAMQDI
                     AAEYKKEKNVDVVSSFASSSTLARQIEAGAPADLFISADQKWMDYAADKKAVDTTTRE
                     TLLGNSLVVVAPKASEQKPFTIDNKTDWIHLLNGGRLAVGDPQHVPAGIYAKEALQKL
                     GAWQTLEPKLAPGEDVRGALALVERNEAPLGIVYGSDAVASKGVNVVATFPEDSHKKV
                     EYPIAIVEGHKNAAVSAFYDYLKGPQASAIFKRYGFTTK"
     gene            18106..>18359
                     /gene="modB"
                     /locus_tag="MOX77_002551"
                     /gene_synonym="chlJ"
     CDS             18106..>18359
                     /gene="modB"
                     /locus_tag="MOX77_002551"
                     /gene_synonym="chlJ"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459761.1"
                     /note="part of ModCBA molybdate transporter; member of ABC
                     superfamily; inner membrane component; regulated by
                     repressor protein ModE; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HCA3358044.1"
                     /translation="MILTDPEWQAVLLSLKVSSLAVLFSLPFGIFFAWLLVRCRFPGK
                     ALLDSVLHLPLVLPPVVVGYLLLVSMGRRGFIGQWLYDWFG"
BASE COUNT         4149 a         4705 c         5003 g         4502 t
ORIGIN      
        1 gcgaataccg attacaatgc ggcaattgcg ctggtgcagg ataagtctcg ccaggatgat
       61 gcgattgtgg cgtttcagaa cttcatcaag aaataccctg attctactta tcagccgaac
      121 gccaattatt ggctgggcca gttgaattac aacaagggta aaaaagatga cgccgcctat
      181 tatttcgcct cggtagtaaa aaactatcct aagtcgccga aggctgcgga cgcgatgtac
      241 aaagttggcg ttatcatgca ggacaaaggt gatacggcaa aagcgaaagc ggtttatcag
      301 caggtgatta acaaatatcc tggcactgat ggcgcgaaac aggcgcagaa gcgtcttaac
      361 gcgatgtaat gcgtaccatg cgaccagaaa acgccttttt tctggtcgcg tcgtgcgatt
      421 cctaagcagt tgagccctct gcgtcgaaat ttttgttgcg ctcaaatctg aaatcagtaa
      481 tatatgccgc cgttgccacg ggatattaaa caactcgaaa gcaacgtaaa agtgggtcgt
      541 tagctcagtt ggtagagcag ttgactttta atcaattggt cgcaggttcg aatcctgcac
      601 gacccactaa tttaacatca aactcagatg ttgaacgtga aggataacgt tgcgtcagca
      661 acggcccgta gggcgaggcg aagccgagtc atcctgcacg acccaccatc tttagatggt
      721 ccgagtaaaa tctttcaggc agcacccgta tgggtcgtta gctcagttgg tagagcagtt
      781 gacttttaat caattggtcg caggttcgaa tcctgcacga cccaccaata tacaaggtgg
      841 taactggtag agaacgtgaa ggataatgtt gctttagcaa cggcccgaag ggcgaggcga
      901 agccgagtca tcctgcacga cccaccatcc tgaatgattg aagcagtaac ccttatccaa
      961 ggggtcgtta gctcagttgg tagagcagtt gacttttaat caattggtcg caggttcgaa
     1021 tcctgcacga cccaccaatg taaaaaagcg ccctaaaggc gcttttttgc tatctgcgat
     1081 atggaagatt cgaacctgcc gcaggttcgg gtcttgcctg atgcgctgcg cttatcaggc
     1141 ctacagacgg caccgctcac gtaggccaga taagacgtta cgccgccatc agatacggac
     1201 tacgtaatta ttgtgacttt ccttattgaa tcagctatct tgtttagcat ataaaacaaa
     1261 ttgaccgatt gtggcgttta ttacgctttc attcggttgt ttcgttaagt cagtaaaacg
     1321 agaagccacg atgagcgtaa tgtttgactc acaagccgca atctacccgt tcccgccgaa
     1381 accaacgccg ttgaacgacg atgaaaagca attttatcgt gagaaaatca agcgtttgct
     1441 caaagagcgc aatgccgtca tggtggcgca ctactacacc gatccggaaa ttcaacagtt
     1501 agcagaagaa accggcggct gtatttccga ctcgctggaa atggcccgtt tcggcgcgaa
     1561 gcacgccgca tccacgttac tggtagcggg cgtacggttt atgggggaaa ccgccaaaat
     1621 cctcagcccg gaaaaaaacg ttcttatgcc tacgctggcg gcggaatgtt cgctggattt
     1681 aggctgccca atagacgaat ttagcgcttt ttgtgatgcg caccctgaca gaaccgtagt
     1741 ggtctatgct aacacctcgg ctgctgttaa agcgcgtgcg gactgggttg tgacctccag
     1801 tatcgccgta gaactgattg agcatctgga tagtttgggg gaaaaaatta tctgggcgcc
     1861 ggacagacac ctggggaatt acgtgcaaaa acagaccagg gccgatgtac tgtgttggca
     1921 aggggcgtgt atcgtgcatg acgagtttaa aacccaggcg ttgacccgtt taaaaaaaat
     1981 ctatcccgat gccgctattc tggttcaccc tgaatcgccg cggtccattg tcgagatggc
     2041 cgatgcggtg ggctccacca gtcagcttat taaggcggca aaaacgctgc cgcacagaca
     2101 gcttatcgtc gcgaccgatc gcggcatctt ctacaaaatg cagcaggcgg ttccggataa
     2161 agagttgctt gaagcaccaa cggcgggcga aggggcaacc tgtcgcagct gcgcgcattg
     2221 tccgtggatg gcgatgaacg gcctgaaagc cattgctgaa gggctggagc agggaggcgc
     2281 ggcgcatgaa atacaggttg atgcggcgct acgcgagagc gcattacttc ccctcaaccg
     2341 gatgctggat tttgcggcta cacttcgggt gtaaagacgg aaatctttgg gggagagaat
     2401 ggattttttt agtacgcaca acatactgat tcatattccg attggcgctg gcgggtacga
     2461 tctctcatgg atcgaagcgg taggaaccat cgccggcctg ctctgtattt ggcttgccag
     2521 tctggagaat atcagcaact acttttttgg actggttaac gtcaccctgt ttgcgattat
     2581 tttctttcag atccagcttt atgccagcct gttgctgcaa ctctttttct ttgccgccaa
     2641 tatttatggc tggtatgcgt ggtcgcggca aacaaaggat aatgaggccg agcttaaaat
     2701 acgctggctg ccgttgccaa aagcaatggc atggctggcg atatgtgtga tagctatcgg
     2761 tttgatgacg cgatatatcg atcccgtatt cgccgtcctg acgcgcgtgg ccgtcgccat
     2821 tatgcagatg ctggggttac aggtgacaat gcctgtactg caaccggacg ctttcccgtt
     2881 ctgggactct tgcatgatgg tgctgtctat cgtggcgatg attttgatga cacgcaaata
     2941 tgtcgaaaac tggctcctgt gggtgataat caacgtaatc agtgtggtga tttttgcttt
     3001 gcagggcgtc tatgcgatgt cgctggaata tctgatcctg acatttatcg ccgtgaacgg
     3061 tagtcgcctg tggataaaca gcgcgcggga gcgaggatcg cgcgcgcttt cccgttaatg
     3121 gtgatgaaca tgcccggatg gcgtctgatt caggtgacag tccgggccgt gacacatttg
     3181 atactccatt tgaatcgtag cgtgcgcaat atggtattcg tgcatcagga aatcctggat
     3241 acgttccagc agcgcatcat ggtcgtgtgg cggaatgacc tgagcgtgca atgtcatgac
     3301 tggtttttcg ccgaccatcc agacatgcac atggtgtacg ttgcggactt cggggatttc
     3361 ccggcttaaa tggcgctgta aggcattaat atccagtgaa accggcgcgc cttccagcaa
     3421 ttcgttgacg ctatctttta acaaacgcca ggcgctgcgt agtaccagta ccgaaaccag
     3481 aatagagaga atcgggtccg ctggcgtcca gcccgtccag ataatgatca acgcggcgac
     3541 tattgcgccg acggaaccca gcaaatcgcc catcacatgt agcgcggcag cgcgcacgtt
     3601 caggtttttt tcatcgcttc cccgatggag tatccagaac gcaaacaggt tcgccagcag
     3661 acccgcgacc gcaatcacca tcatcagatt gcccgccacc ggacgtggcg tgtaaaagcg
     3721 ctctatcgct tcccagacaa tgagaagggt aatgaccacc aacgcaatgg cattcacaaa
     3781 ggccgccagt gtggtgagtc ttagccagcc aaaagtgtgg cgaacagtcg gggggcgacg
     3841 ggaaaattga accaccagca gcgcaaagag aagagccgcc gcgtcggtga gcatatgtcc
     3901 cgcatccgcc aacaacgcca gagagccgga gagtatcccg cccaccacct caaggagcat
     3961 aaatccggca gtgacgataa aggcgaaaag caggcgacga gcattattat ctttcggcag
     4021 gtgtgaatcg gcatgagagt gtgagtgcgc cataacgtca ttcctttgtt attctcatca
     4081 atactgtaga tatcatactg atttttcgct gacaaaataa aaaggagagc gaaagctctc
     4141 ccgttatcag acttttttct gaattactgc gtggtaccgt cggttttggt attcacgtca
     4201 ttattgacgc cattaccggt ttccactttt ttattaatat ccgggcagcg accatcttta
     4261 cacatggtat ttttatgctc ttcatccttg gtcattccgt catgattcat ggttgaaccg
     4321 tcaggatgct gcatcgtgct gttagtattg ccgttggtat tgatgtcgtt gttattcaca
     4381 tcattcggcg ccacattctg gcgggcgtcc ggggcaacct gaccggcatt tgccgccgag
     4441 ttcgcctggc cattactgga ctgcgcgtta gattcagcag ctaacgctgc gccgctggca
     4501 aggccgaggg tagcggtgag taaaagcgta gtcagttttg tcattttcat aagatgctcc
     4561 tgttatggtg gatatgtcgg ataacctctt ccaacagtgc acgtgtcagt caaatcctca
     4621 aataagggat aaaaagcgtt cgccgccgcg ggttaacgca gcagagaatc ttgcaataat
     4681 tcataaacag agtggttaca gttaaaaagt gtaggttaga tcccattttc cgctacattt
     4741 gtgcgttttt ttcctgaatt ccaggattat tccgttcaaa gtgtaaaagc ccgtttacac
     4801 tatttaattg aagagataga ttggagggat tgcattcatt gggataagta cggcaacatt
     4861 ggaataaaca tgaattatca gaatgacgat ttacgcatta aagaaatcaa cgagttatta
     4921 cctccggtcg cgctgctgga aaagtttccc gccacggaaa atgcagcaaa taccgttgct
     4981 cacgcacgca aagccatcca taaaattctc aaaggcaatg acgatcgtct gctggtggtg
     5041 atcggtcctt gttcaattca tgatccggca gcggcgaaag agtatgccgc ccgtttgctg
     5101 gcgctacgcg atgagcttca aggcgagctt gaaattgtca tgcgcgtcta ttttgagaaa
     5161 ccgcgtacta ccgtcggctg gaaagggctg attaacgatc cgcacatgga taacagcttc
     5221 cagattaacg acggtctgcg tattgcgcgc aaactgctgc tggatattaa cgacagcggc
     5281 ctgcctgccg ccggcgaatt cctcgatatg atcacgccgc aatatctggc cgatctgatg
     5341 agctggggcg ccattggcgc acggactact gaatcccagg ttcatcgcga actggcgtct
     5401 ggcctctctt gtccggtcgg ttttaaaaat ggtactgatg gcacgattaa agtcgccatt
     5461 gacgccatca acgccgccgg cgcgccgcat tgcttcctct ccgtcactaa atggggtcat
     5521 tcggcgattg tgaataccag cggcaacggc gactgccata tcattctgcg cggcggtaaa
     5581 gcgccaaact atagcgcgca acatgttgct gaggtgaaag aaggcctcat caaagcggga
     5641 ctgacgccgc aggtcatgat cgatttcagc catgccaact cctgtaagca atttcaaaag
     5701 cagatggagg tttgcgccga tgtctgtcag cagatagcgg gcggtgaaaa agcgattatt
     5761 ggcgtgatgg tagagagtca tctggtagaa ggaaaccaga gtctggaaag cggtcagccg
     5821 ctgacctacg gtaaaagcat tactgacgcc tgtattggct gggaagatac cgatgcgctg
     5881 cttcgtcagt tgtcggcagc ggtaaaagcc cgtcgaggtt aatcttcatt acgtcttaaa
     5941 ccggcccgca aggccggttt tttactggaa accgatgaga tagcccaccg tgtcatcaat
     6001 cgaaatataa ataaatatat aacgaaataa ttcggcgcta taattctctt ctgattaata
     6061 acgtcgctcg aaccatgacc tgtcaggaca aatcactttt agcccccggt ctcgcttcca
     6121 cgcccgtcat tccgcgctat cgccagatca tacgcaaacg ggccgtgctc atgtcagcta
     6181 ttgcgctggc gatgatggtt tcactgatgg tggatgtaac ctgtgggtct tctggtttac
     6241 cgctcagtgc gctgtggcag gcgcttttcc agccggaaaa ggtgaatgcg ggcatacacg
     6301 ttattgtctg ggatatccgc ttaccctatg ccctgatggc cctactggtg ggcatggcgt
     6361 tagggttagc gggcgccgaa atgcaaacca ttttaaataa tccgctggcg acgccgttta
     6421 cccttggcgt atcgtccgcg gcggcttttg gcgctgcgct ggcgattgtg ttggggatcg
     6481 gtattcccgg tattcctgcc gcctggttta tcccggccaa tgcgttcatc tttgcgcttt
     6541 tatccgcgtt actcctggac ggtattaccc gttggacagg cgtcgccgca tccggagtgg
     6601 tgttgttcgg tattgcgctg gtattcacct ttaacgcgtt ggtcgccatt atgcagtttg
     6661 tggctgatga agatacgctg caggggctgg tattctggac gatggggagc ctggtccgcg
     6721 cgtcgtggga aaaattgggc gtactggccg tggtgtttat tgctgtgctt ttttgcgcgt
     6781 tacgaagcgc ctggcaactc acggcattac gtctgggcga agagagggcg atgagctttg
     6841 gggttcatgt ccgccgttta cgcctgctgt cattgttgcg tatcagcttg ttatcagcgc
     6901 tggcggtagc tttcgtcggg ccgattggtt ttattggtct cgttgcgccg cacattgcgc
     6961 gaatactgtt gggggaagat caccgtttct accttccggg cagcgtgctg ataggcgggc
     7021 tggtgttatc gctggcctct attgcggcga aaaatagtat tccgggcgtc atggtgccgg
     7081 tggggattgt cacctcgctg gtcggggttc cgttcttttt aagcattgta ttgcgacatc
     7141 gggggagtct ctgatgcgca ggttaatgct ccgctcattt agcgccggct attccactca
     7201 gccggttatt gcagatctca acgttccctt actgccgcgc gggaaaatta ccattttgct
     7261 ggggccgaac ggctgtggta aatcgacgtt actacgttcg ctggccgggc tgaataacgt
     7321 cgacggcgag gcgctgcttg atggcgaaga tctcatgtcg ttatcgtttg ccgagcgggc
     7381 gcagaaagtt gtgtttttgc cgcagtcatt accgcagggc gtacatctgc atgtactgga
     7441 gtcgattatc gtggtactgc gggcatcagg cggcagagac aatgcgcagg gcagagcgca
     7501 gatactggct atccttgagc aattgggcat aacgcatctg gcgttgcagt atctcgacca
     7561 gctttccggc ggtcagcggc agttagtggg tctggcgcaa tcgctgattc gtcgccctga
     7621 acttctgttg ctggatgagc cgctcagcgc gctggattta aactatcagt ttcacgtaat
     7681 ggatctcgtg cgtcgggata cccaggcgca aaatagggtg acgatagtcg tggcgcatga
     7741 cattaatatt gccctgcgtc atggtgacca tgtcctgatg ctaaaagacg gcaggctggt
     7801 cgccagcggc gcgccggaga cggtgattac tgcggagcgt ctggctgaag tgtaccgggt
     7861 acgaggacgc gtggagcgct gttcgcaggg gaaattgcag gtggtgctgg acggcgtgat
     7921 cgctgtttaa gacatattgc ctgatggcgc tgcgcttatc cggcctaccc attgctcgta
     7981 ggccggataa ggcagttata ccgccatccg gcaaaggtga ttacttcgct ttaccctgat
     8041 tcgccacggc agccgctttc gcggcgattt cgtcagcgtt acccagatag taatgtttga
     8101 tcggcttgaa gttttcgtcg aactcataca ccagcggcac gccggtcggg atgtttaact
     8161 caagaatctc atcttcactc atgttatcca ggtatttcac cagcgcacgc aatgagttac
     8221 cgtgagcggc gatgatcacg cgctcaccgc tcttcatacg cggcaggatg gtgtcgttcc
     8281 agtaaggaat aacgcggtcg atggtcagcg ccagactttc ggtcaacggc agctctttct
     8341 cgctcagttt ggcataacgt ggatcgtgac ccggataacg ctcatcatct ttggtcagtt
     8401 ccggcggcgt cacggcaaaa ccgcggcgcc actgcttaac ctgctcgtca ccatattttt
     8461 ctgccgtttc cgctttattc agcccttgca acgcgccata gtgacgttca ttgagtttcc
     8521 aggatttttc caccggcagc cacgcctgat ccagttcatc cagtacgttc cacagcgtat
     8581 ggatagcgcg tttcagtacg gaagtgtagg caaaatcaaa gctgaaacct tcttctttta
     8641 gcagtttacc cgctgctttt gcttcgctta cgcctttttc agacaggtca acatcatacc
     8701 agccggtgaa acggttctct ttgttccatt gactttcacc gtgacgtacc agaaccagct
     8761 tagttacagc catactctca ctcctataaa tcatatgtaa tgataataat tctcattata
     8821 ttgccgcgag gtgttggcgg caatgcttac gcataaccat agcgaaaata gtggcgcagt
     8881 gtaaggttct tgtgaactca gagttgcgat tttgtcttta agtggtggag gtttgagcag
     8941 ggcaatggcg cgtaggcccg ataagcttgc gtcatcgggc atgtagcggc atatcgttag
     9001 aacggaataa actgatactc ggtcaggctg gcgtactcct cgccagggcg aaggatacag
     9061 tcaggctgcg gccattcagg atgattcggg ctgtccggca gcagttcgct ttccagcgcc
     9121 agcccttgcc agtcggcata aggttccggt ccgcgggaag gtgtacccgc cagataattg
     9181 ccggaataaa actgtagcgc cggggcggtg gtgtaaacca tcatttgtag ctttccatcc
     9241 tgtgaccaca gacgggccgc cggctttttg ccatcaccct gcgtctgtag caggaaagca
     9301 tgatcgtagc ttttaacctt gcgctgatcg tcatcggcga gaaactcgct ggcaatgact
     9361 tttggcatcc ggaagtcaaa cgaggtattg gctaccgatt ttagcccctg gcgtggaata
     9421 ccggattcat ctaccggcag atactcatcc gccagaattt gcagcttatg ttggcgcacg
     9481 tcggtccgat cgccgtccag attaaaatag acgtggttgg tcaaattcac cggacagggt
     9541 ttatcgaccg tcgcccggta ggtgatggag attctattgt catcggtcag acgatattgc
     9601 gccgtggcgc aaagatggcc aggaaagccc tggtcgccgt catcagaggt gagcgcgaat
     9661 aatacctggc gatcgttttg gttcacaatt tgccagcggc gcttgtcaaa gccttccggt
     9721 ccgccgtgta gctggttctc gccctggctt gggcttaact gtacggtttc gccggcaaac
     9781 gtatagcggc tattggcgat acggttcgcg taacggccaa tagaggcgcc gaggaatgac
     9841 gtctgttcag ggtagtgttc cgggctggcg cagcccagca atgcttcccg aacgctgccg
     9901 tcagacagcg gaatacgggc ggaaagaaga gtggctcccc agtccatcag cgttaccacc
     9961 atccctgcgc tgttgcgcag ggttagcagg cggtacggtt gaccatcggg ggccagtgcg
    10021 ggcgtttcat ttagcactgt cctgctcctt gtgacggttt gcatacataa aaggtttctt
    10081 tgattccggt tttcgcttcg tactgttgcg caacggcctg ctgcacagcg ggaaccagat
    10141 cttccgggat cagcgcgaca acacagccgc caaagccgcc gccggtcatg cgcacgccgc
    10201 cttgatcgcc gatggtcgct ttgacaatgt ctaccagcgt gtctatctgc gggacggtaa
    10261 tttcgaaatc atcgcgcatt gaggcatggg actccgccat cagttggccc atacgttgca
    10321 aatcaccttt ctccagcgcg cttgccgctt caacggtgcg cgcattttcg ctcaatacat
    10381 ggcgaacgcg ttttgcgact accgggtcca gttcgctggc gacggcattg aacgcctcaa
    10441 ggctgacatc gcgcagggcc ggctgctgga agaaacgggc gccggtttcg cactgttcac
    10501 ggcgggtatt atactcgctg cccaccagag tgcgcttaaa gttactgttg atgatcacca
    10561 cggcgacgcc tttcggcata gaaaccgctt tggcgccgag cgtacggcaa tcaatcagca
    10621 acgcatgatc ttttttgccg agcgcagaga tgagctgatc cataatgccg cagttacagc
    10681 cgacaaactg gttctcggcc tcttgtccgt tgagcgcaat ttgcgcgccg tccagcggca
    10741 ggtgataaag ctgctggaag acggtgccca ccgccacttc cagcgaagcg gaggagctta
    10801 acccggcgcc ctgcggcaca ttgccgctga tgaccatatc cacgccgcca aacgcgttgt
    10861 tacgctgttg caggtgtttc actacgccgc gcacatagtt agaccactgc tggctatcgt
    10921 gggtcacgat cggcgcatcc agtgaaaatt cgtccacctg attgtcgtaa tcggcggcaa
    10981 tcacccgtac ggtacgatcg tcgcgcggcg cacagctaat tacggtctgg taatcgatag
    11041 cgcagggcag aacaaaacca tcattgtaat cagtgtgctc gccgatcaga ttgacgcggc
    11101 ctggcgcctg aatcgtgtgg gtagcagggt agccgaaaat ttcagcaaac agcgcgcgcg
    11161 ttttctcttt cagattcatt tttatactcc ggattcgcga aaatggatgt cgctgaccgc
    11221 gcgcaggcgt tcagccgctt gttctgcggt taaatcacgc tgggtttccg ccagcatttc
    11281 atagccgacc ataaatttac ggacggtcgc agagcgcagc agcggcggat aaaagtgcgc
    11341 gtgcaactgc cagtgtgcgt tttcttcacc gttaaacggc gcgccgtgcc agcccattga
    11401 gtaggggaag gaacactgaa acaggttgtc ataacgactg gtcagctttt tcaacgccag
    11461 cgccagagag tcgcgctgct cgtcgcttaa atcggtaatg cgcaggacat gcgttttggg
    11521 taacagtagc gtttcgaacg gccacgccgc ccagtaaggc accaccgcca gccagtgttc
    11581 ggtttcgacc acggtgcggc tgccgtccgc cagttctcgc tggacataat ctaccagcat
    11641 tggcggacgc tgttcggcga aataggcttt ttgtaaacga tcttcgcgtt cggcctcatt
    11701 cggcaggaag ctgttggccc agacctgtcc atgcggatgc gggttcgaac agcccatcgc
    11761 cgcgccttta ttttcaaaga cctgcaccca cggataggtt ttgcctaact cggcggtctg
    11821 cgtttgccag gttctgacga tttccgtcag cgcgggcagg ctcaactccg gcagcgtttt
    11881 actgtgatcg ggagaaaagc agatcacgcg gctggtgccg cgcgcgctct gacagcgcat
    11941 cagcggatcg tggctgtccg gcgcatccgg cgtatcggcc atcagcgccg cgaaatcgtt
    12001 agtaaagacg taagtccctt tgtaatcggg atttttatcg ccggtgacac gcgtattgcc
    12061 cgcacacaag aagcagtccg gatcgtgggc cggcagcatt tgctgagacg gcgtttcctg
    12121 cgccccctgc caggggcgtt ttgcgcgatg cggcgaaacc agaacccact ggccggtaag
    12181 cgggttataa cggcgatgcg gatgatcgat gggattaaat ggggtcataa caacgtcctt
    12241 aatctgagta tccctgcgga tggcgtgact gccagtgcca agtgtcctgc gccatttcgt
    12301 caagcgtgcg ggtgacgcgc cagttcagct cgcgatcggc tttgctggca tccgcccaat
    12361 acgccgggag atcgccgtcg cgacgcggcg cgaagtggta attaatgggt ttaccgcagg
    12421 ctttactaaa ggcgttgacc acatccagga cgctactgcc gacacccgcg ccgaggttat
    12481 aaatatgtac gccggatttg tccgccagtt tttccatcgc cacgacgtgc ccgtcggcta
    12541 agtccataac gtgaatgtaa tcgcgtacgc cggtgccatc ctcggtcggg taatcgttgc
    12601 cgaaaacggc gagcgattcg cgacgaccca cggcgacctg ggcgatatag ggcatcaggt
    12661 tattcggaat accttgcgga tcttctccca tgtcgcccga cgggtgcgcg ccgaccggat
    12721 tgaaataacg cagcagcgca atactccact ccggctgggc tttttgcaga tcggtgagga
    12781 tctgttctac catcaattta cttttgccgt aggggctttg cggcgtgccg gtaggaaaac
    12841 tttcgacgta aggaattttg ggctgatcgc cataaacggt ggcagaggag ctaaaaataa
    12901 ggtttttaac gttggccgca cgcatggcgc tgaccaaccg cagcgtaccg ttgacgttgt
    12961 tgtcatagta ctccagcggc ttggcgaccg attcgccgac ggctttcagg ccggcaaagt
    13021 gaatcacggt atcaatcgcg tgatcgtgca gaatttcggt tataagcgct tcgttgcgaa
    13081 tatcgccttc gacaaaggtc gggtgcttac cgcccagacg ttcaataacg ggcagcacgc
    13141 tgcgcttgct gttgcagagg ttatcgagga tgacgacgtc atgaccattt tgcagcaatt
    13201 gtacgcaggt atgacttcca atgtaaccgc taccacctgt aaccaatact ctcataattc
    13261 gctccgttaa gcctatggta tggaataacc atagcataac aaagatgcga aaagtgtgac
    13321 atgtaataaa ttagtggaat cgtttacacg ctggtgattt tacgcattta tatcaattaa
    13381 atgattacaa atcatctgac ttgagaatgc ttctgctttt tatccgaaaa aaaggcgcgt
    13441 tacgcgcctg ggaatgaaac ggacggggca ggagctgtca gtctttttta cgcgagagta
    13501 gcttcctggc gagcgccccg acagcgacga cgccgatggc ggtcactttc cagaatttaa
    13561 gtaacgcgat accgagcata gcaagcagtc ctactttctt ggccgcgata ccgccaatca
    13621 gcgcggcgag ctcatactcc gctattttgt ccgttgattc gttgaagtca gcgtagcgtt
    13681 gtccagcgtt gaacttgacg gaactgagaa ttcttttcgc cagagggatt tcgtggtcaa
    13741 cagaacctct gtcggtcacc agatttaaag aaaaataacc ttcacgtccc agcagatagg
    13801 tgttgtagtt cacgccttgt tcattcagtg gttcgttggt gccgatatcc tggatggcgg
    13861 cggaccagat cagacgatga ttggttgcat cgtaggtagg cttctcgatc cagccaataa
    13921 tttctatcgg ctcaatgcct tttgcaatac gatctttatt cgcttctttt gtgcctttgc
    13981 gcaggttatc cattaattca tcggcatccc agttttttgc atcatcatct tttacataac
    14041 cagaatcatc atattcgata gaaataaatc cattcatttc ctttttaaat acgagaccgt
    14101 aaaaatattc atcgtcaaca tagttaccaa tttcacgcat aaataccgcc gcttcttttg
    14161 cgggtatcca ggtaaatcct tccggtagat taagcgtggc tttatcacct aaactaatct
    14221 ttgtcggacc cgcaacggcg gcgcgactca tgccttcaac agcgacctca acggcggttt
    14281 tacgcgcttc ctgcgcagcg gtcggctttt gctcagcata actgctgggg caaaataaca
    14341 tggctgccag taaaaatagt attatttgtg gaaaacgaaa agccataatg aatcccttgt
    14401 attcacatac gacatcattg tcgaaaattt caggattatt atgacaatga ggcggtcagc
    14461 gattcaagag atagtaagct tatcgaccgt tattattatt cttaataaaa ggagagtggt
    14521 tccagaatgg cgcgcggcgc cattctgata atacatttaa ttattgcatc gtccggaaac
    14581 gtacttataa cgttcgccct ctggtacaaa ttccagccgg tgggtaatac aggcaggcgc
    14641 atcctctgca tgatgggaaa cgaacagcag ttgagtctct ccctggcgaa ttaatacatc
    14701 cacaaaacgg cgtaccagtt ggcggttcag cgggtccaac ccttgcagcg gctcatccag
    14761 aatcaacact gtcggatgtt taaccagcgc gcgcacgatt agcgccagcc gctgctgtcc
    14821 ccaagagaga ctgtggaagg gggcatccgc cgtacgctta tcgattccca gaatatccag
    14881 ccactgttgc gccagttttc gttgcctgtc tgaaacggcc tggtaaatgc cgatagaatc
    14941 gaaatagccg gagagaatga cattgcgtac cgtggtactg acgcggtaat ccagatgtaa
    15001 actgctgctg acgtagccga tatgtttttt gatatcccag attgtttcgc cgcttcctcg
    15061 ccgccgcccg aacagcgtaa gatcgttgct gtagccttgc ggatgatcgc cagtaataag
    15121 gctaagcaac gtagacttac ccgctccgtt aggaccgacg atctgccagt gttcgcccgg
    15181 attgactcgc cagcttaggt ggtggaggat agggcgatcg ttatacgaga ctacgccatc
    15241 gttaagtacg atccgtggtt cgccatcggg taacgcatgg cgggcggaag gttcgtccgg
    15301 ttcgggtaat tgtacgtcgg tcagacgctc gctgtgcgcg agttgagcga ccaacgcccg
    15361 ttgcagtaac tctgccgtcg ttccggtctc cgccagcgta cagtcggcaa gcacgccggc
    15421 aaactgcacg aagtccggga tctcatcaaa acggttgagt accagcgcca gggtcatacc
    15481 cgcctggttc aacgccgtca ggcgttgtgc cagttgttga cgggcggtca cgtcaagtcc
    15541 gtcgaacggt tcatcaagga ttaataactc cggctcagac atcagcgcct gacacagcag
    15601 cgcttttcgc gtctcgccgg tagaaaggta tttaaaacgc ctgttgagta aagcggaaat
    15661 gccaaactgc tgcgccagca tcgcatagcg ggcaggatgg tgaacatcat cctgaataat
    15721 ttccgcggta gtgcgcccgg tatcgtcttc gccaggactg agcatatcgg tgttattacg
    15781 ttgccactca tcgctgacca gcttttgcaa ttgttcaaag gacagacggg taatgcgggt
    15841 aaactgacac tggcgctcgc ctgttaataa tggcagttca cccgccagcg cgcgggcgag
    15901 cgccgacttc ccgctcccgt tagccccaac gaatgcccag ctatcgcccg cattgagcgt
    15961 cagcgaatcc agatgaagtg tttttgtatc gctcagacga aacgtgcctt gcgaaatttg
    16021 caacgatgac attttgcatc ccattttttg cagcgatgaa tgacagggat acgtctttcg
    16081 gcaacggatg tcaatgtgct tagcacaacg ttgcaataat cactctgtcc gcattaaacc
    16141 aggcaatcac gtcatcgcct tcctttaacg tggcggcatc cgcagtcggt atcgtggcgc
    16201 acagcgtctg gccgtccggc agcgccatca acacttcaca ctgttccgcg ccgcgctcga
    16261 tatggctgat cgttcccgac aactgattgt cagctgcgcg cgcaacggct gcatcccggg
    16321 taatgccaac ccacggcgct tttagcagga tcagcacttc ttttccctcc tccaggccga
    16381 gacgctcgcc gctttgcgcc gtcagcgcga ctttgagccg cgttttgccg tcggccagca
    16441 gcacgtcgac atgctgttgc acctgatcgc gatcgcgggc ggtaatggtg ccgaaccact
    16501 gatttcgggc gctggtttgc agtgaaaagc gggagatagc ggccagcaga ctgtcaagcg
    16561 gcagggcgtc atcgtcgctt aacacatcga acgctttttg ctgaatttgg cccagcaaat
    16621 cgtaaagctg gatcagacgc tgaccatagc gggttaatac cgcgccgccg ccgcctttgc
    16681 cgcccgttgc gcgttcaacc agcatatgtt cgctaagctg gttcatgtcg tttatcgcat
    16741 cccaggcgct cttatagctg attcccgcgt ctttcgcgcc ctgactaatc gagccggaaa
    16801 gcgcaatgtg tttcagcaga gagatacgtc ggggatcggc aaaaagcttt tgctgaagtt
    16861 tcagggtaag aaggatttcg gcctgcataa ccagctccta gtaaaaagac tattgtgact
    16921 gaaaagcgcg tcagcgcaaa gccgaccgca caaaagggga gtgcttttct gtgtgatgcg
    16981 gttaaaatac aaaaaggact atatctggag ttgcccatgt tagagttatt aaaaagtctg
    17041 gtattcgccg tcatcatggt accggtagtg atggccatca tcctcggtct gatttacggt
    17101 ctgggtgagg tgttcaacat tttttccggt atcggtcaga aagaccagtc cagacagaac
    17161 cgctgatttc cccaaacgcc cgctcagtcg ggcgtttttg ttactcaaga tcctgctttt
    17221 cctgccgata ttttctgtgt ttaatcgtta atgggtatga ataaccgctg ggaaacccct
    17281 gagattatcg ttatattgtt gtttacataa cgaaacgcac aaggagttac agatggcgca
    17341 ttcctggtta cgcctggtcg caggggcgac attatctttc gtcatcgctg gtcatgcgct
    17401 ggcggatgaa ggcaagatca ccgtattcgc cgccgcgtcg ctaacgaacg cgatgcaaga
    17461 cattgcggca gaatataaaa aagagaaaaa tgtggatgtg gtctcctcat tcgcctcctc
    17521 ttcaacgctg gcgcgccaga tagaagcggg cgcgccggcg gacctgttca tctctgctga
    17581 tcagaaatgg atggattacg cagccgataa aaaagcggtg gataccacga cgcgcgaaac
    17641 attgcttggc aatagcctgg tagtggtagc gccgaaagcc agcgagcaga aaccgtttac
    17701 catcgacaac aaaacggact ggattcatct gctgaacggc gggcgtctgg cggtgggcga
    17761 tccgcaacac gtaccggcgg gaatttatgc caaagaagcg ctgcaaaagc tgggcgcatg
    17821 gcaaacgctt gaaccgaaac tggcgccggg cgaggatgtg cgcggtgcgt tggcgttggt
    17881 cgaacgtaac gaagcgcctt taggcattgt atacggttct gatgcggtcg ccagcaaggg
    17941 ggtcaacgtg gtggcgacgt tcccggaaga ttcacataaa aaagtggaat accccatcgc
    18001 tatcgtggag gggcataaaa atgcggccgt cagcgcgttc tatgattacc tgaaaggacc
    18061 gcaggcctcg gcaatcttta aacgttatgg atttacgacg aagtaatgat actgaccgat
    18121 ccagaatggc aggctgtcct tcttagcctg aaagtgtctt ccctggccgt gctgtttagc
    18181 ctgccgtttg ggatcttttt tgcctggtta ctggtgcgat gccggtttcc gggcaaagcc
    18241 ttacttgata gtgtcctgca tctgccgctg gtgctgccgc cggtggtggt cggctatctg
    18301 ctgctggtgt cgatggggcg acgcgggttt attggccagt ggctgtatga ctggttcgg
//
LOCUS       DAGWFR010000072        18173 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.073, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000072 DAGWFR010000000
VERSION     DAGWFR010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 18173)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18173)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18173
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.073"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(33..239)
                     /locus_tag="MOX77_002552"
     CDS             complement(33..239)
                     /locus_tag="MOX77_002552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015966176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1107 domain-containing protein"
                     /protein_id="HCA3358045.1"
                     /translation="MKIFQRYNPLQVAKYVKILFRGRLYIKDVGAFEFDKGKILIPKV
                     RDKQHLSVMSEVNRQVMRLQTEMA"
     gene            566..1123
                     /locus_tag="MOX77_002553"
     CDS             566..1123
                     /locus_tag="MOX77_002553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtfJ family protein"
                     /protein_id="HCA3358046.1"
                     /translation="MTLRKILAMSCLLLPIMACAHNLEDNQRVPPVGIADRGELTLNK
                     DEFSYKNWNSAQLAGKVRVLLHIAGRTSAKEKNATLIEAIKSAKLPHDRYQTTTIVNT
                     DDAIPGSGMFVRSSIESNKKLYPWSQFIVDSNGVARNAWQLKEEGSAVIVLDKDGRVQ
                     WVKDGALTQQEVQQVVDLLHKLLSK"
     gene            complement(1113..1853)
                     /gene="cysQ"
                     /locus_tag="MOX77_002554"
     CDS             complement(1113..1853)
                     /gene="cysQ"
                     /locus_tag="MOX77_002554"
                     /EC_number="3.1.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HCA3358047.1"
                     /translation="MLEQVCQLARNAGDAIMQVYDGAKPMEYARKQDDSPVTAADIAA
                     HTVILEGLRTLTPDIPVLSEEDPPAWEVRQHWQRYWLVDPLDGTKEFIKRNGEFTVNI
                     ALIEQGKPVLGVVYAPVLKVMYYAAEGKAWKEECGVRKQIQVRDARPPLVVISRSHTD
                     DELTEYLQQLGEHQTTSIGSSLKFCLVAEGQAQLYPRFGPTSVWDTAAGHAIAVAAGA
                     HVHDWQGKTLDYTPRESFLNPGFRVTIY"
     gene            2120..4063
                     /locus_tag="MOX77_002555"
     CDS             2120..4063
                     /locus_tag="MOX77_002555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2',3'-cyclic-nucleotide
                     2'-phosphodiesterase/3'-nucleotidase"
                     /protein_id="HCA3358048.1"
                     /translation="MIKFSATLLATLIAASVNAATVDLRIMETTDLHSNMMDFDYYKD
                     TATEKFGLVRTASLIHAARNEVKNSVLVDNGDLIQGSPLGDYMAAKGLKDGDVHPVYK
                     ALNTLDYAVGNLGNHEFNYGLDYLHNALAGAKFPYVNANIIDVKTQKPLFTPYLIKET
                     SVIDKDGHPHTLKIGYIGFVPPQIMIWDKANLSGKVTVNDITETARKYVPEMREKGAD
                     IVVVIAHSGLSADPYHSMAENSVYYLSEVPGVDAIMFGHAHAVFPGKDFADIKGADIA
                     KCTLNGIPAVMPGMWGDHLGVVDLVLNNDSGKWQVTQAKAEARPIYDAAAKKSLAAED
                     SKLVGILKADHDATREFVSKPIGKSADNMYSYLALVQDDPTVQVVNNAQKAYVEHFIQ
                     GDPDLAKLPVLSAAAPFKVGGRKNDPASFVEVEKGQLTFRNAADLYLYPNTLVVVKAS
                     GKEVKEWLECSAGQFNQIDIHSNKPQSLINWDGFRTYNFDVIDGVNYQIDVSQPARYD
                     GECQMVNPQAERIKNLTFNGKPVDPNATFLVATNNYRAYGGKFAGTGDSHIAFASPDE
                     NRAVLAAWIGAESKRAGEIHPAADNNWRLAPIHSDTALDIRFETSPGDKAAAFIKEKG
                     QYPMKKVGVDDIGFAIYQVDLSK"
     gene            complement(4121..4507)
                     /locus_tag="MOX77_002556"
     CDS             complement(4121..4507)
                     /locus_tag="MOX77_002556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HCA3358049.1"
                     /translation="MRAHTLSRQLREGNLFAEQCPSREVLKHVTSRWGVLILVALRDG
                     THRFSDLRRKMGGVSEKMLAQSLQALEQDGFLNRVSYPVVPPHVEYSLTPLGEQVSDK
                     VAALADWIELNLPQVLAQRERLSDGG"
     gene            4595..5443
                     /locus_tag="MOX77_002557"
     CDS             4595..5443
                     /locus_tag="MOX77_002557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HCA3358050.1"
                     /translation="MIAITGATGQLGQHVIENLLKTTPASHLVAIVRNPKKAAPLSQR
                     GIAVRQADYANEAALTTALQGVDKLLLISSSEVGQRTAQHRNVIQAVIAAKVKFIAYT
                     SLLHADKSPLALADEHIETEKMLAESGIPHTLLRNGWYTENYLASVPAALKHGVFIGA
                     AGEGKIASAMRADYAAAAARVIREEGHAGNVYELAGDNAWTLSQLADELTHQSGKKIV
                     YQNLSEVDFAAALKGAGLPDGLADMLANSDAGAAKGGLFDDSHTLRKLIGRPTTALTE
                     SLRSVL"
     gene            5524..6489
                     /locus_tag="MOX77_002558"
     CDS             5524..6489
                     /locus_tag="MOX77_002558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HCA3358051.1"
                     /translation="MISGVLYALLAGLMWGLIFVGPLIVPDYPALLQSMGRYLALGLI
                     ALPIAWLGRTRLRQLTRKDWSTALSLTLMGNVIYYACLASAIQRTGAPVSTMIIGTLP
                     VVIPLFANVLYSQRDGRLSWLRLAPALALIGFGLLCVNIAELSQGLSDVSGWRYGSGI
                     VLALISVACWAWYALRNARWLRENPDKHPMMWATAQALVTLPVSLIGYAATCLWLSIQ
                     NPMFTLPFGPHPALFIGLMIAIAVLCSWVGALCWNIASQKLPTVILGPLIVFETLAGL
                     LYTFILRQEIPPFLTLSGIALLVAGVVIAVRAKPEKATVVPVTER"
     gene            6592..7254
                     /gene="ytfE"
                     /locus_tag="MOX77_002559"
     CDS             6592..7254
                     /gene="ytfE"
                     /locus_tag="MOX77_002559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster repair protein YtfE"
                     /protein_id="HCA3358052.1"
                     /translation="MAYRDQPLGELALSIPRASALFRQYDMDYCCGGKQTLARAAARH
                     DVDIDIIEAQLAQLAEQPIEKDWRAVPLADIIDHIVVRYHDRHREQLPELILQATKVE
                     RVHADKPNVPRGLTKYLTALHEELSSHMMKEEQILFPMIKQGMGRQATGPISVMESEH
                     DEAGELVDVIKHVTQNVTPPPEACTTWKAMYNGINEMIDALMEHISLENNVLFPRALA
                     GE"
     gene            complement(7321..8709)
                     /locus_tag="MOX77_002560"
     CDS             complement(7321..8709)
                     /locus_tag="MOX77_002560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000944334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358053.1"
                     /translation="MLRIKQFCLSILLMLAPVLALACSDIPYALFHYQPWGQGTKYVV
                     EEDYGYSINFKDIEIREVKFSQLRHVPDRIVNEYNDRGKMSNDFVHVAAFSSLIKNDF
                     WQFYWLTDGQHILWAGKIVQNPPGKPPVDAATFRAYGRFAADKDSLYFDGERTDDNHG
                     EKRVDMDSLQQVGGNIKLRDSGDVLKDRRNLYFQGRWLASAQGYSILGVKSWEQRNIL
                     FSPTSCDTTSNPGPWDTILRTATQVFVNGVAIDADPNSFHVVRWVAGVQLLYRDKAGV
                     KRYYFGKDCLNTFNVQRDKVTWMTREASRRGDDCRIATIPNVDPEYFHPIHYNWTVAQ
                     YKDLLYQVKYVSPVDRVLTITRLPDPQVQLKAGANLVGKQIYFIGDGGVQIIDLIGPL
                     VWFKSPDGSFSDVFAHDDRYLYFFGDTLVDSGQRRNVTRTLDTAHIDKSGYYLVTEEG
                     KYEVINNAFTSR"
     gene            complement(8724..9863)
                     /locus_tag="MOX77_002561"
     CDS             complement(8724..9863)
                     /locus_tag="MOX77_002561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000155541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DKNYY domain-containing protein"
                     /protein_id="HCA3358054.1"
                     /translation="MTIRRWILSATLLLLPVPAFADFQYQQDKDGVFYTADDEPQILS
                     RLPDVSYSHLRRIADLSHPQDPRPLIEINPDSHNCDDNHICQHAYLSDGHFILWAGKI
                     VQNTGDEPAVDVASFQSFGAFAADKHGLYFDGKRRDSNAGEKRVDMATLAETKIWNLL
                     RDKNNLYYEGRWLGRADGFRVLRLDSTSAREFIVTTAQRVIVNGIPITADANTFQIIR
                     WMPGEVLIYRDKTGKHDYEIDNSSRYCGYFNIGLREVTWLKHEATNAGSSCKVETLPG
                     VDPEYFFRLNGNTGWYKDRIYQVSTNALGEGVLRIFTSQEKLPALKIDRVTYNYYHLA
                     LSADGQLYRQISRDQWQSYNPILTEWTTVSPAPTDVISLLPSDYH"
     gene            complement(10201..11604)
                     /gene="cycA"
                     /locus_tag="MOX77_002562"
                     /gene_synonym="dagA"
     CDS             complement(10201..11604)
                     /gene="cycA"
                     /locus_tag="MOX77_002562"
                     /gene_synonym="dagA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001541380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-serine/D-alanine/glycine transporter"
                     /protein_id="HCA3358055.1"
                     /translation="MVDQVKVAADEQAPAEQSLRRNLTNRHIQLIAIGGAIGTGLFMG
                     SGKTISLAGPSIIFVYMIIGFMLFFVMRAMGELLLSNLEYKSFSDFASDLLGPWAGYF
                     TGWTYWFCWVVTGMADVVAITAYAQFWFPGLSDWVASLAVVVLLLSLNLATVKMFGEM
                     EFWFAMVKIVAIVALIVVGLVMIAMHFKSPTGVEASFAHLWNDGGWFPKGISGFFAGF
                     QIAVFAFVGIELVGTTAAETKDPEKSLPRAINSIPIRIIMFYVFALIVIMSVTPWSSV
                     VPDKSPFVELFVLVGLPAAASVINFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPKA
                     FAKLSKRAVPAKGLTFSCICLLGGVVMLMVNPSVIGAFTMITTVSAILFMFVWTIILC
                     SYLVYRKKRPHLHEKSIYKMPLGKLMCWVCMAFFAFVLVLLTLEDDTRQALIVTPLWF
                     IALGLGWLFLRKNKLAK"
     gene            complement(11900..12520)
                     /gene="fklB"
                     /locus_tag="MOX77_002563"
     CDS             complement(11900..12520)
                     /gene="fklB"
                     /locus_tag="MOX77_002563"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015742582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HCA3358056.1"
                     /translation="MATPTFDTIEAQASYGIGLQVGQQLSESGLEGLLPEALVAGIAD
                     ALEGKHPAVPVDVVHRALREIHERADAVRRERFKAMAAEGVKYLEENREKDGVNSTES
                     GLQFRVLTQGEGAIPARTDRVRVHYTGKLIDGTVFDSSVARGEPAEFPVNGVIAGWIE
                     ALTLMPVGSKWELTIPQELAYGERGAGASIPPFSTLVFEVELLEIL"
     gene            12740..13375
                     /locus_tag="MOX77_002564"
     CDS             12740..13375
                     /locus_tag="MOX77_002564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OapA family protein"
                     /protein_id="HCA3358057.1"
                     /translation="MPGRFELKPTLAKIWHAPDNFRIMEPLPPMHRRGIIIAAIVLVI
                     GFLLPASETSDSPVVTREAQLDLQSQSQPPTEAQLQAQLVAPQNDPDQVAPVASEPIQ
                     EGQPEEQNQPQTQPFQQDSGIGQQWRSYRVEPGKTLAQLFRDHGLPPTDVYAMAQVEG
                     AGKPLSNLKNGQMIKIRQNASGVVTGLTIDGDNGQQVLFTRQPDGSFIRAQ"
     gene            complement(13425..14351)
                     /locus_tag="MOX77_002565"
     CDS             complement(13425..14351)
                     /locus_tag="MOX77_002565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HCA3358058.1"
                     /translation="MDTQRQASPFARKNVVYVCAAFCCLLWGSAYPAIKSGYDLFQIA
                     TDDIPSKIVFAGYRFLFAGGLLLLFALLQRKPIGRFRPRQFAQLTLLGLTQTSLQYLF
                     FYIGLAFTSGVKGSIMNATGTFFSVLLAHFIYQNDRLSYNKTLGCILGFAGVMVVNVS
                     NGLDFSFNLPGEGSVVLAAFILSAATLYGKRLSQTVDPMVMTGYQLGIGGLVLVIGGY
                     VFGGTLTIHGFSSVAILVYLTLLSSVAFALWNILLKYNRVGMIAPFNFLIPVSGAALS
                     AIFLGENILEWKYMIALVLVCSGIWWVNKVKR"
     gene            complement(14499..14948)
                     /gene="rplI"
                     /locus_tag="MOX77_002566"
     CDS             complement(14499..14948)
                     /gene="rplI"
                     /locus_tag="MOX77_002566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005134442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HCA3358059.1"
                     /translation="MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPATKKNV
                     EYFEARRAELEAKLADVLAAANARAEKINALETVTIASKAGDEGKLFGSIGTRDIADA
                     VTAAGVDVAKSEVRLPNGVLRTTGEHEVNFQVHSEVFAKVIINVVAE"
     gene            complement(14990..15217)
                     /gene="rpsR"
                     /locus_tag="MOX77_002567"
     CDS             complement(14990..15217)
                     /gene="rpsR"
                     /locus_tag="MOX77_002567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012986941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HCA3358060.1"
                     /translation="MARYFRRRKFCRFTAEGVQEIDYKDIATLKNYITESGKIVPSRI
                     TGTRAKYQRQLARAIKRARYLSLLPYTDRHQ"
     gene            complement(15222..15536)
                     /gene="priB"
                     /locus_tag="MOX77_002568"
     CDS             complement(15222..15536)
                     /gene="priB"
                     /locus_tag="MOX77_002568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal replication protein N"
                     /protein_id="HCA3358061.1"
                     /translation="MTNRLTLSGTVCRAPLRKVSPSGIPHCQFVLEHRSVQEEAGFHR
                     QAWCQMPVIVSGHENQAITHSITVGSRITVQGFISCHKAKNGLSKMVLHAEQIELIDS
                     GD"
     gene            complement(15543..15938)
                     /gene="rpsF"
                     /locus_tag="MOX77_002569"
     CDS             complement(15543..15938)
                     /gene="rpsF"
                     /locus_tag="MOX77_002569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020456251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HCA3358062.1"
                     /translation="MRHYEIVFMVHPDQSEQVPGMIERYSAAITGAEGKIHRLEDWGR
                     RQLAYPINKLHKAHYVLMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASPM
                     VKAKDERRERRDDFANETADDAEAGDSEE"
     gene            complement(16009..16215)
                     /locus_tag="MOX77_002570"
     CDS             complement(16009..16215)
                     /locus_tag="MOX77_002570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358063.1"
                     /translation="MWQKSTLTTVSIFLPQQAVYSGMRYEVNISAAKCDGTGVTFGTI
                     NNCTITLSLPAGASIITRHFSADL"
     gene            16409..16684
                     /locus_tag="MOX77_002571"
     CDS             16409..16684
                     /locus_tag="MOX77_002571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1471 domain-containing protein"
                     /protein_id="HCA3358064.1"
                     /translation="MRARIMLFLAALLPGITATAAIELNNHQATNMDDVRSLGVIYIN
                     HNFATESEANLALNDEADARNAMYYHAILIREPGSNGNIHASANIYR"
     gene            complement(16814..17500)
                     /locus_tag="MOX77_002572"
     CDS             complement(16814..17500)
                     /locus_tag="MOX77_002572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 4-epimerase"
                     /protein_id="HCA3358065.1"
                     /translation="MQKLKQQVFDANMDLPRYGLVTFTWGNVSAIDRERGLVVIKPSG
                     VAYETMKVDDMVVVDMDGKVVEGRYRPSSDTATHLALYQRYPSLGGVVHTHSTHATAW
                     AQAGMAIPALGTTHADYFFGDIPCTRALSEEEVQGEYELNTGKVIIETLGEVEPLHTP
                     GIVVYQHGPFAWGKDAHDAVHNAVVMEEVARMAWIARGINPGLNPIDDYLMNKHFMRK
                     HGPNAYYGQK"
     gene            complement(17500..>18173)
                     /locus_tag="MOX77_002573"
     CDS             complement(17500..>18173)
                     /locus_tag="MOX77_002573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 3-epimerase"
                     /protein_id="HCA3358066.1"
                     /translation="SAVAETGVRVPSMCLSAHRRFPLGSEDDAVRAQGLEIMRKAIQF
                     AQDVGIRVIQLAGYDVYYQQANDETRCRFRDGLKESVDMASRAQVTLAMEIMDYPLMN
                     SISKALGYAHYLNNPCFQLYPDIGNLSAWDNDVQMELQAGIGHIVAVHVKDTKPGVFK
                     NVPFGEGVVDFERCFETLKQSGYCGPYLIEMWSETAENPAAEVAKARDWVKARMAKAG
                     MVEAA"
BASE COUNT         4595 a         4902 c         4521 g         4155 t
ORIGIN      
        1 tactttttta acctactgca tagcactttt ggttacgcca tctcagtttg cagacgcata
       61 acctgacggt taacttcaga catcacagac aagtgctgct tgtctctcac ttttgggata
      121 agaatcttac ccttatcgaa ctcaaaagcg ccaacatcct tgatatataa ccgtccacgg
      181 aacaggatct tcacgtactt cgccacctgt agcgggttgt agcgttggaa aattttcatt
      241 gttgtctcct gcagagtatt acgcccttgc ggtgccacaa tcggcccaac agttttaagg
      301 cgcaaatttt aatgccatat gactatagac catatctacg tcgtttccag tgtgcataag
      361 tatatttacc ttttgattac agttattcag aattatctaa acatcagctc atttttctca
      421 gtatatgcct tcatttttca caggaagtgt gcacccgccc gcaaactggc atcccctttg
      481 cgggaaaaag catcaatcgc acatatgatt aactgtcggc ccaaagtggt cggatcacct
      541 gcaaaaaaat aaagaaggaa tgaccatgac cctacgtaaa attctggcga tgtcgtgtct
      601 gctactcccc ataatggctt gtgcgcataa ccttgaagat aaccaacggg tgccgccggt
      661 aggcattgcc gatcgtggcg aactgacgtt gaataaagat gagtttagtt ataaaaactg
      721 gaatagcgcg cagctggcgg gaaaagtgcg cgtcctgctg cacattgcgg gtcgaacgtc
      781 agcgaaggaa aaaaacgcca cgctgattga agcgattaaa tcagccaagc tcccgcatga
      841 cagataccag acgaccacaa ttgtgaacac cgatgatgca atcccaggct ccggtatgtt
      901 cgtgcgtagc agtatagaaa gtaataaaaa gctctacccg tggtcgcaat ttattgtcga
      961 cagcaatggc gtggcgcgta acgcctggca attaaaagaa gaggggtccg ccgtcatcgt
     1021 gcttgacaaa gacggtcggg ttcaatgggt gaaagatggc gcgttaaccc agcaagaggt
     1081 acagcaggtg gtcgacctgc tgcataagct cctcagtaaa tagtcacccg gaagccgggg
     1141 ttaaggaacg attcacgagg ggtatagtcc agcgtttttc cctgccagtc gtgaacgtgc
     1201 gccccggctg caacggcaat ggcatgacct gcggcagtat cccagacgct ggtcggccca
     1261 aatctggggt aaagctgcgc ctgtccttcc gccacaagac agaatttcag cgaggaacca
     1321 atagaggtag tctgatgttc gccaagctgt tggagatatt cggtgagttc atcatccgta
     1381 tgcgaacggc taatcaccac cagcggcggg cgggcatccc gcacctgaat ctgcttacgc
     1441 accccgcact cctctttcca ggccttacct tccgccgcgt agtacatcac tttcagcacc
     1501 ggcgcataga caacgcccaa caccggcttg ccctgctcaa tcagcgcgat attgaccgtg
     1561 aattctccat tgcgcttgat gaattctttg gtgccgtcga gcggatcgac cagccagtaa
     1621 cgctgccagt gctggcgcac ttcccaggcg ggcggatctt cttctgaaag caccggaata
     1681 tccggcgtga gcgtgcgtaa cccttcgaga atcacggtat gtgcggcgat atccgccgca
     1741 gtgactggag aatcgtcctg cttgcgggcg tactccatcg gtttggctcc atcataaacc
     1801 tgcataatgg catcgcccgc gttccgtgca agctggcata cttgttctaa cattctccac
     1861 ctctttatga cgggggcgtt aactcgttgt tttacttata cccgatcgtt aagggttccg
     1921 ccaactgtga taccgtcagc ggttttgata atagctttca tggcatgatt cacctttctg
     1981 tgaacactcg caaaaaatcg gccggatggg gcggtttcgc cttcttctgg cgacggtcgg
     2041 aacgataccg gtttcactgt ttatcatcgc tatttttcac tatccggctt ttctattgcg
     2101 ttcttaaaag gtgcctctga tgattaagtt tagtgcaacg cttctggcta cgctgatcgc
     2161 cgccagcgtg aatgcggcca ccgtcgatct ccgtatcatg gaaactactg atttacatag
     2221 caacatgatg gatttcgatt attacaagga taccgcaacc gaaaaattcg gattggtacg
     2281 taccgcaagt ttgattcatg ccgcccgaaa tgaagtcaaa aacagcgtgc tggtggataa
     2341 cggcgacctg attcagggga gccctctggg cgattatatg gcggcaaaag ggctcaaaga
     2401 cggtgatgtt cacccggtct ataaagcgct caatactctg gattacgcgg ttggaaacct
     2461 cggcaaccat gagtttaatt atggtctgga ctatctgcat aacgcgctgg ccggcgcgaa
     2521 attcccttat gttaacgcca atattatcga cgttaaaacc caaaagccgc tctttacgcc
     2581 ttatctgatt aaagagacga gcgttattga taaagacggc cacccgcaca ctctgaaaat
     2641 cggctatatc ggctttgttc cgccgcaaat catgatttgg gataaagcga atctgagcgg
     2701 caaagttacc gtcaatgaca ttacggaaac cgcccggaaa tatgtgcccg aaatgcgcga
     2761 gaaaggcgct gatatcgtgg tagtcattgc tcactcaggc ctttctgccg atccgtacca
     2821 cagcatggcg gaaaactcgg tttattacct cagcgaagtt cccggcgtcg acgcgattat
     2881 gtttggtcac gcccacgccg tcttccccgg taaagatttt gccgacatca aaggcgcgga
     2941 tatcgccaaa tgtacgctta acggcattcc tgcggtaatg ccaggcatgt ggggcgacca
     3001 tctgggagtg gtcgatctgg tgctcaataa cgacagcggc aaatggcagg ttacgcaggc
     3061 gaaagcggaa gcgcggccta tttacgacgc cgccgctaaa aagtcgctgg cggcggaaga
     3121 cagtaagctg gtcggtattc tgaaagccga tcacgatgcc acccgcgagt ttgtcagcaa
     3181 gcccatcggt aaatccgccg ataatatgta cagttatctt gctctggtgc aggacgatcc
     3241 taccgtacag gtggtgaata acgcgcaaaa agcgtatgtg gaacacttta ttcagggcga
     3301 tccggatctg gcgaaactgc cggtgctgtc cgccgccgcg ccgtttaaag ttggcgggcg
     3361 taagaacgat cctgccagct ttgtcgaggt ggaaaaaggc cagctgacct tccgtaacgc
     3421 cgcggatctt tatctctatc cgaatacgct ggtggtggtg aaagccagcg gcaaggaggt
     3481 aaaagagtgg ctggaatgtt ctgccggaca gtttaatcag attgatattc acagcaacaa
     3541 accgcaatcg ttgatcaatt gggatggctt tcgcacctat aatttcgatg tcattgacgg
     3601 tgtgaattat caaatcgatg tgtcacagcc cgcccgctat gatggcgaat gccagatggt
     3661 gaatccgcag gcggaacgta ttaaaaacct gacctttaac ggtaagcctg tcgacccgaa
     3721 cgctacgttc ctggtcgcca cgaataacta tcgcgcttac ggcggcaagt ttgccggcac
     3781 gggcgacagc catatcgcct ttgcgtctcc ggatgaaaat cgcgccgtgc tggcggcatg
     3841 gattggcgca gagtcaaaac gcgcgggcga aatccatccg gcggcggata ataactggcg
     3901 tctggcgcca atccacagcg atacggcgct ggatatccgc tttgaaacat cgccaggcga
     3961 taaagccgcg gccttcatta aagagaaagg gcagtatccg atgaaaaagg ttggtgtcga
     4021 tgatatcggt tttgccattt atcaggtgga tttgagcaag taacgtgagt cccgtatggc
     4081 gctgcgttta ttcggcctga ctggcaggcc gaataaagcg ctagccgcca tctgataaac
     4141 gctcccgctg cgccaatacc tggggcaaat tcagttctat ccagtccgcc agcgcggcga
     4201 ctttatcact cacctgctcg ccaagcggcg tcaggctgta ctccacatgc ggcggaacaa
     4261 ctggatatga cacccggtta agaaatccgt cctgttcaag cgcctgtaac gactgcgcca
     4321 gcatcttttc actcacgcct cccatcttgc ggcgcaggtc gctaaaacgg tgtgtaccgt
     4381 cgcgtaacgc gaccagaatc agtacgcccc agcgactggt gacatgtttt aacacctcac
     4441 gggacgggca ctgttcagca aagagattac cttcacgcaa ctgccgggaa agagtatgag
     4501 cgcgcattga tacttacctt tttgtacgta cttactaaaa gtaagtttag gtggtagcgt
     4561 aataaaacac aagaccaaca ctgaggagtt caccatgatt gctatcactg gcgcaacagg
     4621 ccaactgggc caacacgtta ttgaaaacct gctaaaaacg acgcccgcca gtcaccttgt
     4681 cgcgatcgtc cgtaacccga aaaaagccgc cccgctcagt cagcgcggga ttgccgttcg
     4741 ccaggcggat tacgctaacg aagctgcgct gaccaccgcc ttacagggcg ttgataaact
     4801 gctgctcatt tcatccagcg aagtgggaca acgcaccgcg cagcaccgca acgtcattca
     4861 ggccgtcatt gccgcgaagg tgaaattcat cgcctatacc agcctgctac atgcggataa
     4921 atcgccgctg gcgctcgccg atgaacatat tgaaacggaa aagatgctgg ctgagtcagg
     4981 tattcctcac acgctattac gtaacggctg gtatacggaa aactacctgg cgagcgtccc
     5041 tgccgcgctg aagcatggcg tctttattgg cgcggcggga gaagggaaaa tcgcctccgc
     5101 aatgcgcgct gactatgccg ccgccgccgc gcgcgtcatc cgtgaagagg gtcacgccgg
     5161 gaatgtttac gagctggcgg gtgataacgc ctggacatta agccagttgg cggatgaact
     5221 tactcatcag agcggaaaaa aaatcgtcta ccagaacctg agcgaagtcg attttgccgc
     5281 cgcgctgaaa ggcgcaggcc tgcctgacgg actggcggat atgttggcca attctgacgc
     5341 tggcgcggcg aaaggcggtc tgtttgatga cagccatacg ctgcgtaaac tcatcggtcg
     5401 cccgacgacg gcgctcacag aaagccttcg ctccgtactg taagtgttaa aatttagtta
     5461 atttatatgg catcctcata gaccttctct gataatgacg gaacggttta tgaggagaat
     5521 ctgatgatta gcggcgtgct atacgccctg ctggcagggc taatgtgggg attgattttc
     5581 gtcggcccgt taatcgtgcc ggattacccg gccctcttac agtcaatggg acgctatctg
     5641 gcgctggggc tgattgccct gccgattgcc tggttaggcc gcacgcggtt acgccagttg
     5701 acgcgcaaag actggtccac cgccctgtcg ctgaccctga tgggcaatgt aatctattac
     5761 gcctgcctcg ccagcgccat tcagcgaacc ggcgcgccgg tttcgacgat gatcatcggg
     5821 acattgccgg tcgtcattcc gcttttcgct aacgttctct atagccaacg agacggcaga
     5881 ttatcctggc tacgtttagc gcccgcgctg gcgcttatcg gttttggcct gctgtgcgtc
     5941 aatattgctg aacttagcca gggattgtcc gatgttagcg gctggcgcta tggttcaggc
     6001 attgtgctgg cgctgatttc cgtagcgtgc tgggcatggt atgcgctgcg caacgcccgc
     6061 tggctgcggg aaaatcccga caaacatccc atgatgtggg caacggcgca ggcgctggtt
     6121 acgctgccgg tctcgttaat cggctatgcg gcaacctgtc tgtggctgag tatccagaac
     6181 ccgatgttta ccctgccctt tggcccgcat cccgcgctgt ttatcggtct gatgatcgcc
     6241 atcgcggtgc tgtgttcctg ggtgggcgcg ttgtgctgga atatcgccag ccaaaaattg
     6301 ccaaccgtga ttttagggcc gctgattgtt tttgaaacgt tggcaggact gctctatacc
     6361 ttcattctgc gccaggaaat cccgccattc ctgacgttaa gcggcattgc gctcctggtg
     6421 gcgggcgtgg ttattgccgt gagagcgaaa ccggaaaaag cgaccgtcgt tccggtcacg
     6481 gaacgctaat ctcatcctgg cttaaattat acgcaccccg aaagagttat agcctcgcct
     6541 taaagatgca tttaaaatac aacttatatt attgcaaatg aggtaacggc tatggcttat
     6601 cgcgatcaac ctttaggcga actggcgctc tctattcccc gcgcatcggc gctgtttcgc
     6661 cagtacgata tggattactg ctgcggcgga aaacagacgc tggcgcgcgc cgccgctcgt
     6721 cacgacgtcg atattgacat tattgaagcg caactcgcgc agttggctga acagcccatc
     6781 gaaaaagact ggcgcgccgt tccgctggcg gacattattg accatatcgt tgtgcgctat
     6841 catgaccgac accgcgaaca actgccggag cttatcctgc aggcaaccaa agtggaacgc
     6901 gttcacgcgg ataagccaaa cgtcccacgc ggcctgacaa aatatctcac cgcgctgcat
     6961 gaagagcttt ccagccatat gatgaaagaa gaacagatcc tgttccccat gatcaaacag
     7021 ggtatgggtc gccaggcaac gggcccgata agcgtaatgg aaagcgagca tgacgaggcg
     7081 ggagagctgg tagacgtcat caaacacgtc acccaaaatg taacgccgcc gccagaagcc
     7141 tgcaccacct ggaaagcgat gtataacggc attaatgaga tgattgatgc tctgatggag
     7201 cacatcagcc tggagaataa cgtgctgttc ccacgcgcgc tggccgggga ataatccatc
     7261 gccaataaac gatcctgaac gcatagacag gatcgtttat tctgaatcga ctaacgcttt
     7321 ttagcgagag gtgaatgcat tattaataac ctcatatttc ccctcctcag tgaccagata
     7381 ataaccgctc ttgtcgatat gcgcagtatc cagcgtccgc gttacgttac gccgttgccc
     7441 gctatctacc agcgtatcac cgaagaaata gagataacga tcgtcatgag caaaaacatc
     7501 agaaaatgaa ccatcgggac ttttaaacca caccaatggt ccaataaggt cgataatctg
     7561 cactccccca tcgccgataa aatagatctg tttacccacc aaattagcgc cagctttcag
     7621 ctgtacctgc ggatcaggca agcgggtgat ggttaatacc ctgtcgaccg gagagacata
     7681 cttcacctgg tacaatagat ctttgtactg tgctaccgtc caattgtaat gaatgggatg
     7741 gaaatattct ggatcaacat tgggaatagt cgctattcgg cagtcatcgc ctcggcgcga
     7801 tgcctctcgc gtcatccatg tcaccttatc ccgctgtaca ttaaacgtat tgagacagtc
     7861 tttgccgaag taatagcgtt ttacgcctgc tttgtcgcga tagagtaact gcacgccagc
     7921 gacccagcgc acaacatgaa aagagttcgg atcggcatca attgccacac cattaacaaa
     7981 aacctgcgtg gcggtacgca gaatagtgtc ccacgggcca ggattagatg tagtatcgca
     8041 gctggtcggc gaaaacagaa tattacgctg ctcccaggat ttaacgccca ggatggaata
     8101 tccctgcgca ctagccagcc agcgtccctg aaagtagagg ttgcgcctgt ctttaagcac
     8161 atcgccggag tcgcgtaatt tgatgttgcc gccgacctgc tgcaacgaat ccatatcgac
     8221 ccttttttca ccatgattat catctgtgcg ctcgccgtcg aagtaaagac tatctttatc
     8281 agcggcaaag cgtccatacg cccgaaaagt cgctgcatcc actggcggct tacccggtgg
     8341 attttgtacg attttcccag cccataaaat atgctggccg tcggttagcc aataaaactg
     8401 ccagaaatca ttttttatta gcgatgaaaa agcggcgaca tgaacaaaat cattactcat
     8461 ttttccacgg tcattatatt cattaacaat gcggtcagga acgtgccgta gttgactaaa
     8521 ttttacctct cgaatttcaa tatctttaaa attaatacta taaccataat cttcttcaac
     8581 tacatatttc gttccctgcc cccacggctg atagtgaaac aaagcatatg gaatgtcgga
     8641 acaggccaga gctaacactg gtgccagcat taataaaatc gataaacaga actgttttat
     8701 tctcaacatt gcgccatcct gcgctagtgg taatcagagg gaagcaaaga gataacgtca
     8761 gtgggcgctg gtgataccgt cgtccactct gttaatatcg ggttatagct ctgccattga
     8821 tcacgtgaga tctggcgata taattgccca tccgcggaca aagccagatg gtagtaatta
     8881 taggtaactc tatctatttt cagcgccgga agtttttcct gcgacgtaaa aatgcgcagc
     8941 accccctcgc ccaacgcatt cgtgctcacc tgataaatac gatccttata ccaaccggtg
     9001 ttcccgttca gacgaaaaaa atactccgga tcgacacccg gcagggtttc cactttacaa
     9061 ctgctcccgg cgttggttgc ctcatgcttc agccatgtca cctcacgcag gccaatatta
     9121 aaatagccgc agtaccgact ggaattatca atctcatagt catgcttacc ggttttatca
     9181 cgataaatta gtacctcgcc aggcatccag cgaatgattt gaaacgtatt agcatcagcg
     9241 gtaatgggta tgccgttcac aatcacccgt tgcgccgtcg tcacaataaa ctcccttgcc
     9301 gaagtggaat ccagcctcaa cacgcgaaac ccatcggccc gccccagcca gcggccttca
     9361 taatagagat tatttttatc ccgcagcaga ttccagattt tcgtctctgc cagagttgcc
     9421 atatccacac gtttttcacc cgcattgcta tcacgacgtt taccatcaaa atagagaccg
     9481 tgtttatcgg cggcaaaggc gccaaaagac tgaaagctgg caacatcaac ggcaggctca
     9541 tccccggtat tctggacgat tttgcctgcc cacaggataa agtgcccatc gctgagataa
     9601 gcgtgctgac aaatatgatt gtcgtcgcag ttatggctgt cgggattgat ttctattaac
     9661 gggcgagggt cttgcgggtg agataaatcg gcaatacgcc gtaaatgcga atagctaacg
     9721 tcaggcagtc gggagagaat ttgcggttcg tcgtcggcgg tataaaaaac gccgtcctta
     9781 tcctgctgat actgaaaatc tgcgaacgcg ggaacgggca gcagcaaaag cgtagcgctt
     9841 aaaatccagc gtcgaatggt cataattaca gtttgaaata ggagattaat ttgttactta
     9901 aaccactttt tcaacgtatt atccagcgcg agccgccatt ataggaattc atcaaggcgg
     9961 cacttaccgt cagcctgcaa tttacagctg cccttcctga agaaacgttt ttcgcgtcat
    10021 tgcatcagcg gacaaacact catttcctga gcttttcatc tccatacgct atcaaatgtg
    10081 gcgagaaaaa tagctcgtta aggagcggga agcgacaaaa tggggcgtaa aaatgaagaa
    10141 agcgccccgg cgggtacgtt atgcgcatac cccctcgcct aagcgagagg gataaatccg
    10201 tcatttagcc agtttgttct tacgcaggaa cagccagccc agacccaacg cgataaacca
    10261 cagcggcgtc acgatcagcg cctggcgcgt atcatcttcc agcgtcagca ataccagcac
    10321 gaacgcaaag aacgccatgc agacccagca catcagctta ccgagcggca tcttatagat
    10381 ggatttttca tgcaggtggg gacgcttttt gcggtacacc aggtatgaac acagaatgat
    10441 ggtccagaca aacataaaca ggatggccga aaccgtagtg atcatggtga atgcgccaat
    10501 cacgctcggg ttgaccatca gcataaccac gccgcccagc aggcagatac aggagaaggt
    10561 caggcctttc gccggtaccg cgcgtttcga tagcttagcg aacgcttttg gcgccacgcc
    10621 ttcttgcgcc aggccaaaca gcatacggct ggtcgagaag acgccgctgt tggcggaaga
    10681 cgccgccgag gtcagcacaa caaagttgat cacgctcgcg gcggcaggca gacccaccag
    10741 tacaaacagc tcaacaaacg ggctcttatc cggtacgact gaactccacg gcgttaccga
    10801 cataatgaca atcagcgcaa agacgtagaa catgatgata cggatcggta ttgagttgat
    10861 cgcgcgcggc agcgattttt ccggatcttt agtttctgcg gcggtagtac cgaccagctc
    10921 aatgcccacg aaggcgaaca ccgcaatctg gaaaccggca aagaacccgc taataccttt
    10981 cgggaaccag ccgccgtcat tccacagatg cgcgaaagac gcttcaacgc cggtcggcga
    11041 tttaaagtgc atcgcaatca tcaccaaccc aaccacaatc aacgccacga tggcgacgat
    11101 tttgaccata gcaaaccaaa attccatttc accaaacatt ttaacggtgg cgaggttgag
    11161 gcttagcagc aggaccacta ccgccagcga ggcgacccaa tcggaaaggc cgggaaacca
    11221 gaactgcgcg taggcggtaa tcgccaccac gtcagccata ccggtcacta cccagcaaaa
    11281 ccagtacgtc cagccggtga aatatcccgc ccaggggcca agcaggtcgg aagcaaaatc
    11341 gctaaacgat ttatattcca gattcgagag cagcaattcc cccatggcgc gcatcacgaa
    11401 aaaaagcata aaaccgatga tcatatacac aaaaatgatc gacggtccgg cgagactgat
    11461 cgttttaccc gatcccataa acagaccggt accaatagcg ccgccaatag cgataagctg
    11521 tatatgacgg tttgtaagat tgcgccgtag cgactgttca gccggagcct gttcgtcggc
    11581 tgcgactttt acctgatcta ccatgttttt cttcctgtac ctgtctgtgt tgtgcgggct
    11641 ctacggcctt tggtctatga tacgacgatc ctgttatcag gactcatcga tattaggtaa
    11701 gaatcggcgg gatgaatact aagattcaaa tacaatgtta attttatgtt taaaatgagt
    11761 gttatatcac tttgataatg cgaattatct cacaaaaata cacgtaacga cgccatttgc
    11821 aaaataaaat attggcatct gctgaagtca gggttgccgg ataaggcgtt tacgccatca
    11881 tccggcaaac ccggggcgct tacagaattt ccagcagttc cacctcaaac accagggtgc
    11941 tgaatggcgg aatagatgcc ccggccccac gctcgccata ggccagctcc tgtgggatag
    12001 tcagttccca tttggaacct accggcatca gagtcagcgc ttcaatccag ccggcgatca
    12061 cgccatttac cgggaattca gccggttcgc cgcgcgcgac ggagctgtca aatacggtgc
    12121 catcaataag cttaccggtg taatgcacgc gtacgcggtc ggtacgcgcc ggaatcgcgc
    12181 cttcgccctg cgtcagaacg cggaactgta aaccagattc agtactgttc acaccgtctt
    12241 tttcgcggtt ttcttccagg tatttcacgc cttcggccgc cattgctttg aaacgctcac
    12301 gacgcaccgc gtccgcacgc tcatgaattt cacgcagcgc acgatgcacc acatcaacag
    12361 gaaccgccgg gtgtttacct tccagcgcat cagcaatgcc tgcaaccagc gcttcaggca
    12421 acagcccttc aagaccggat tcgctgagct gctgccctac ctgcaaacca atgccgtagc
    12481 tcgcttgcgc ttcaatagtg tcaaaagtcg gggtggccat tatttttcct tcatcggata
    12541 tcaaaaaagt agcgggcagc ataacagcca cgcttcttct ggtaaaactt tgtctcaggg
    12601 aggatgacaa atcgcaggga aaaagaaaca atagattatc cgtattgatg tcacgaaagc
    12661 ggatagcact accagtatca tagcgttagc catctatact ctatgattaa ggaacgagat
    12721 gcggagcagg aggtaaacca tgcccgggcg ctttgaatta aaaccaaccc tggcgaaaat
    12781 ctggcacgcg ccggataatt ttcgcatcat ggagccgctg ccgcctatgc atcgtcgtgg
    12841 cattatcatt gccgctatcg tgctggtgat cggcttcctg ctgcccgcca gcgagaccag
    12901 cgactcgcct gtcgtcacgc gggaagcgca attggatctg caatcgcaat cacagccgcc
    12961 gacggaggcc cagcttcagg cgcaactggt cgcgccgcaa aacgatccgg atcaggtggc
    13021 gcccgttgcg tcggaaccta tccaggaagg ccagccggaa gaacaaaacc agccgcagac
    13081 gcagcctttc cagcaggata gcggcatcgg tcaacaatgg cgctcgtacc gggtagagcc
    13141 tggtaaaact ctggcgcaac tgttccgtga ccacggactg cccccgacag acgtttatgc
    13201 aatggcgcag gtagaaggcg ctggcaagcc gctgagtaac ctcaaaaatg gtcaaatgat
    13261 taaaattcgc cagaatgcca gcggggtggt gacaggttta acgatagatg gcgataacgg
    13321 tcaacaggtg ctgtttacgc gtcagcctga cggcagtttt attcgcgcac agtaacgccg
    13381 gctgcgcctt accccgtcta taccctattc gttcaggtga agcattaccg cttcacctta
    13441 ttcacccacc aaatccccga acacaccagc accagcgcaa tcatgtattt ccactccaat
    13501 atattctcgc cgagaaaaat agccgaaaga gccgcgccag aaaccgggat cagaaagtta
    13561 aacggcgcaa tcatccccac gcgattatat ttgagtaaaa tgttccatag cgcaaaagcg
    13621 accgacgaga gcagcgtcag gtagactaaa atcgccaccg acgagaagcc atgtatcgtc
    13681 agcgtaccgc caaaaacgta accgccaatg accagtacca gaccgccaat ccccaattga
    13741 tagccagtca tgaccatcgg atcgaccgtc tgcgagagac gtttgccata caatgtggcc
    13801 gcagaaagaa taaacgcagc cagcaccacg gagccttctc ccggcagatt aaagctgaaa
    13861 tccaggccgt tgctgacgtt caccaccatg acgcccgcaa agcccagaat acagccgagc
    13921 gttttgttgt agctcaatcg gtcgttctga taaataaagt gcgccagcaa tacgctgaag
    13981 aatgtgcctg tcgcgttcat gattgagcct ttcacgccgg aggtgaacgc aaggccgata
    14041 tagaaaaaga gatattgcag cgacgtctgg gtcagaccta gtaacgttaa ctgagcaaac
    14101 tggcgcggac gaaaccgacc aatcggttta cgctgaagca gcgcgaacag tagtagcaac
    14161 ccacccgcaa acaaaaaacg ataaccagca aaaacaattt tagaagggat atcgtcggtg
    14221 gctatctgaa agaggtcata accgcttttg atggctggat aagcgctgcc ccatagcagg
    14281 caacaaaatg cggcacacac ataaacgacg tttttgcggg caaacgggga ggcctggcgt
    14341 tgggtatcca ttctttcacc aagaaattaa aataatgttt tatttttaat tatcgcgaaa
    14401 agagggggag atagccagtc gaaaagcgat ggagttaaaa aagcaaaacg ccggcgctgg
    14461 gccgacgttt cgttgctagc aaaaacgaga atgactgatt actcagcaac cacgttgatg
    14521 ataacttttg cgaatacttc gctgtgaacc tggaagttca cttcgtgttc gccagtggta
    14581 cgcagaacgc cgttcggcag acgaacttcg ctcttagcca cgtcaacgcc agctgcagtc
    14641 acagcgtcag cgatgtcgcg agtaccgatg gaaccgaaca gtttaccttc gtcgcctgct
    14701 ttagacgcga tagtaacggt ttccagggcg ttgattttct ctgcgcgtgc atttgcagca
    14761 gccagaacgt cagccagttt agcttccagt tcagcgcgac gtgcttcgaa gtattcaacg
    14821 tttttcttgg tagccggaac agctttaccc tgtggtacca ggaagttacg agcatagccc
    14881 gctttaacgt taacctgatc acccaggcta cccaggtttg ctactttatc aagcagaata
    14941 acttgcatta ccttatcctc tcaaagtcgt attaatggac cgtgaccgat tactgatggc
    15001 gatcagtgta cggcagcaga gacaggtagc gagcgcgttt gatagcgcga gccagctgac
    15061 gctggtattt tgcacgggta ccggtgatac ggcttgggac aatcttaccg ctttcggtga
    15121 tgtagttttt cagcgtagcg atatctttat agtcgatctc ttgaacgcct tccgcggtga
    15181 aacggcagaa cttgcgacga cggaaataac gtgccatatg gctagtctcc agaatctatc
    15241 aattcaatct gctcggcatg cagaaccatt ttgctcagac cgttctttgc cttgtggcaa
    15301 gaaataaacc cctgaacggt tatgcggctg ccgaccgtta tactgtgagt aatggcctgg
    15361 ttttcgtgtc cgctaacaat aacgggcatt tggcaccacg cctgccggtg aaagccggct
    15421 tcctcttgca cagaacgatg ctcaagcacg aactggcaat gcggaattcc tgatggactg
    15481 acctttcgaa ggggggccct gcacacggtg ccggacaacg tcagacggtt ggtcatcaga
    15541 aattactctt cagaatcccc agcttcagca tcatctgcgg tttcgttagc gaaatcatcg
    15601 cgacgctcac ggcgctcgtc tttcgcttta accatcggag atgcttcggt aacagcgtgc
    15661 ttagtacgca taaccatgct gcggataacg gcatcgttga agcggaaggt agtttccagc
    15721 tcatcgatca cttcctgcgg cgcttcaacg ttcatcagaa cgtagtgcgc tttgtgcagt
    15781 ttgttgatcg ggtaagccag ctgacggcgg ccccagtctt ccagacggtg gatcttgcct
    15841 tctgcgccag tgatggcagc agagtaacgc tcgatcatac ccggaacctg ttcgctctgg
    15901 tcaggatgga ccataaaaac gatttcgtaa tgacgcatcg aattgctcct tacggattat
    15961 tcagcctcct gtctgggtca gccgcggccc atggaggcaa ggaacgtgtt aaaggtcggc
    16021 tgaaaaatga cgcgttataa tactggcgcc tgcgggcaaa ctcaaggtga ttgtacaatt
    16081 atttatcgtg ccgaacgtaa cgcctgtccc gtcacatttt gctgctgaga tattaacttc
    16141 atatcgcatg ccactataaa cggcctgttg cggcagaaaa attgacactg tggtcagcgt
    16201 acttttttgc cacacagggt ttcttaaaca tagcggcata catcaacggg ttgttaatca
    16261 ggtaaaaaac gacaatgcga taattttttg aacaacagca tcagaaaagg tcgccatctc
    16321 tgcggctggt tatggttaaa attaaaccag aagcgattca ctaaaggggg atatcgccaa
    16381 ccagaccgcg ctgctgagga ggtactctat gcgagcccgg ataatgttat ttctggctgc
    16441 gcttttgcct ggcataacgg caacggcagc catcgagtta aataatcacc aggccacaaa
    16501 tatggatgat gtgcgcagct taggcgtgat ctacatcaac cataacttcg ccacggaaag
    16561 cgaagccaat ctggcgctga atgacgaggc cgacgcgcga aacgcaatgt attatcacgc
    16621 catacttatc cgggaaccgg gtagcaacgg caacatacac gccagcgcga atatttatcg
    16681 ctaacatcag gaaaaccaac gaaaaagcca tagttgattt gcccccctga acagggggct
    16741 tttttcgcgg aaagatggct ccggaattag acctgtgaca tcccgataat attcacattc
    16801 cggagctcat acttcacttc tgcccgtaat acgcattcgg gccatgctta cgcatgaagt
    16861 gtttattcat cagataatcg tcgatggggt tgaggccagg gttaatgccg cgcgcaatcc
    16921 acgccattct cgccacttct tccatgacga ccgcgttatg taccgcatcg tgcgcatctt
    16981 tcccccaggc gaacggcccg tgttgataca cgacaatgcc tggcgtatgc agcggttcca
    17041 cctcgcccag cgtttcgatg atcaccttgc cggtgttcag ctcgtactcg ccctgcactt
    17101 cttcttcgct taacgccctg gtacaaggaa tatcgccaaa gaaatagtcc gcgtgcgtgg
    17161 taccgagcgc tggaatagcc atccccgcct gcgcccatgc cgtggcgtgg gttgaatggg
    17221 tatgaacgac gccgccaagc gacggatagc gttgatacag cgccagatgg gtagcggtat
    17281 cggaagaagg acgataacga ccctccacca ctttgccatc catatccacc accaccatgt
    17341 catctacctt catggtttca taggcgacac cgcttggctt aatcaccacc agcccgcgtt
    17401 cgcgatcgat agcgctgacg ttgccccagg taaacgtcac cagtccataa cggggcaaat
    17461 ccatgttagc gtcaaatacc tgctgcttga gcttttgcat tatgccgcct ccaccatgcc
    17521 tgctttggcc atgcgcgctt tcacccagtc acgcgctttc gctacctctg ccgccgggtt
    17581 ctctgctgtt tcgctccaca tctcaatcag atagggcccg caatagccac tctgtttgag
    17641 cgtttcgaag cagcgttcga aatcgacaac gccttcgcca aacggcacat ttttgaacac
    17701 gccgggttta gtatctttga cgtgtaccgc gacgatatgc ccgattcccg cctgtagctc
    17761 catctgtacg tcgttatccc aggcagacag attgccgata tccggataga gctgaaagca
    17821 cgggttattg aggtagtgag catagcctag cgctttactg atggaattca tcaatgggta
    17881 atccatgatc tccatcgcca gcgtcacctg ggcgcggctg gccatatcaa cgctctcttt
    17941 taacccatcg cggaagcggc aacgcgtttc gtcgttggcc tgctgatagt aaacgtcgta
    18001 ccccgccagt tgaatgacgc gaatcccgac gtcctgcgca aactgaatcg ctttacgcat
    18061 aatctccagc ccctgcgccc gtaccgcgtc atcttcgcta ccgagcggaa aacgacgatg
    18121 cgcgctcaga cacatggacg gcacacgcac gccggtttca gcaaccgcgc tca
//
LOCUS       DAGWFR010000073        18160 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.074, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000073 DAGWFR010000000
VERSION     DAGWFR010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 18160)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18160)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18160
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.074"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..2126)
                     /locus_tag="MOX77_002574"
     CDS             complement(<1..2126)
                     /locus_tag="MOX77_002574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312276.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding transcriptional accessory protein"
                     /protein_id="HCA3358067.1"
                     /translation="MMNDSFCRIIAGEIQANAGQVEAAVRLLDEGNTVPFIARYRKEI
                     TGGLDDTQLRNLETRLGYLRELEDRRQAILKSISEQGKLTDELAGAINATLSKTELED
                     LYLPYKPKRRTRGQIAIEAGLEPLADLLWNEPSHDPDVKAAKYIDGDKGVADTKAALD
                     GARYILMERFAEDAALLAKVRDYLWKNAHLVATVVSGKEEEGAKFRDYFDHHEPIANV
                     PSHRALAMFRGRNEGILQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRK
                     GVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDP
                     GLRTGVKVAVVDGTGKLVATDTIYPHTGQAAKAATVIAALCEKYHVELVAIGNGTASR
                     ETERFYLDVQKQFPNVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRL
                     QDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTR
                     VAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDAS
                     TVHPEAYPVVERILAATQQALKDLMGNSNELRHLKAADFTDDKFGVPTVSDIIKELEK
                     PGRDPRPEFKTAQFADGVETMNDLLPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISS
                     LSTKFVDDPHTVVKAGDIVKVKVLEV"
     gene            complement(2225..2698)
                     /gene="greB"
                     /locus_tag="MOX77_002575"
     CDS             complement(2225..2698)
                     /gene="greB"
                     /locus_tag="MOX77_002575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015703675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreB"
                     /protein_id="HCA3358068.1"
                     /translation="MKTPLITREGYETLKQELNYLWREERPEVTKKVTWAASLGDRSE
                     NADYQYNKKRLREIDRRVRYLTKCMENLKIVDYSPQQEGKVFFGAWVEIENDDGDTLK
                     FRIVGYDEIFGRKDYISIDSPMARALLKKEVGDLAVVNTPVGEANWYVNAIEYVK"
     gene            2924..3643
                     /gene="ompR"
                     /locus_tag="MOX77_002576"
     CDS             2924..3643
                     /gene="ompR"
                     /locus_tag="MOX77_002576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator OmpR"
                     /protein_id="HCA3358069.1"
                     /translation="MQENYKILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLL
                     TRESFHLMVLDLMLPGEDGLSICRRLRSQSNPMPIIMVTAKGEEVDRIVGLEIGADDY
                     IPKPFNPRELLARIRAVLRRQANELPGAPSQEEAVIAFGKFKLNLGTREMFREDEPMP
                     LTSGEFAVLKALVSHPREPLSRDKLMNLARGREYSAMERSIDVQISRLRRMVEEDPAH
                     PRYIQTVWGLGYVFVPDGSKA"
     gene            3640..4992
                     /gene="envZ"
                     /locus_tag="MOX77_002577"
     CDS             3640..4992
                     /gene="envZ"
                     /locus_tag="MOX77_002577"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     EnvZ"
                     /protein_id="HCA3358070.1"
                     /translation="MRRMRFSPRSSFARTLLLIVTLLFVSLVTTYLVVLNFAILPSLQ
                     QFNKVLAYEVRMLMTDKLQLEDGTQLVVPPAFRREIYRELGISLYTNEAAEEAGLRWA
                     QHYEFLSHQMAQQLGGPTEVRVEVNKSSPVVWLKTWLSPNIWVRVPLTEIHQGDFSPL
                     FRYTLAIMLLAIGGAWLFIRIQNRPLVDLEHAALQVGKGIIPPPLREYGASEVRSVTR
                     AFNHMAAGVKQLADDRTLLMAGVSHDLRTPLTRIRLATEMMGEEDGYLAESINKDIEE
                     CNAIIEQFIDYLRTGQEMPMEMADLNSVLGEVIAAESGYEREINTALQAGSIQVKMHP
                     LSIKRAVANMVVNAARYGNCWIKVSSGTESHRAWFQVEDDGPGIKPEQRKHLFQPFVR
                     GDSARSTSGTGLGLAIVQRIIDNHNGMLEIGTSERGGLSIRAWLPVPVARVQGTTKEA
                     "
     gene            complement(5067..6686)
                     /gene="pckA"
                     /locus_tag="MOX77_002578"
     CDS             complement(5067..6686)
                     /gene="pckA"
                     /locus_tag="MOX77_002578"
                     /EC_number="4.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462403.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (ATP)"
                     /protein_id="HCA3358071.1"
                     /translation="MRVNNLTPQDLKAYGINDVQDIVYNPSYDTLYQEELNPGLEGYE
                     RGVLTNLGAVAVDTGIFTGRSPKDKYIVRDDTTRDTLWWSDKGKGKNDNKPLSQETWQ
                     HLKGLVTHQLSGKRLFIVDAFCGANADTRLSVRFITEVAWQAHFVKNMFIRPTDEELV
                     GFKPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERIQLIGGTWYGGEMKKGMFSVM
                     NYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDG
                     VFNFEGGCYAKTIKLSKEAEPEIYHAIRRDALLENVTVREDGTVDFDDGSKTENTRVS
                     YPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTANQTQYHFLSGFTAKLAG
                     TERGVTEPTPTFSACFGAAFLTLHPTQYAEVLVKRMQAAGAQAYLVNTGWNGTGKRIS
                     IKDTRAIIDAILNGSLDNAETFRLPLFDLAIPTELPGVDTHILDPRNTYASPEQWQEK
                     ATALAKLFIENFEKYTDTPAGEALVSAGPKL"
     gene            7066..8775
                     /locus_tag="MOX77_002579"
     CDS             7066..8775
                     /locus_tag="MOX77_002579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4153 domain-containing protein"
                     /protein_id="HCA3358072.1"
                     /translation="MESVALSRTTRWGMLLTGLLQGVLCYLLMAWLVPQNSDWLFYGM
                     PATIALSSMLLLTVVSFKQRALWGWLGLIFVVVLAMSGWLKWQVEAVEKWRLAELLWL
                     YGLRLVLMAMLVLPWMQYQLHSQTGSARYPQFYLRLWHNVLTLFIVLVANGLFWLVLL
                     LWSALFRLVGIRFFSTLFFETEAFIYVTIGLITALAVILARTQSRLVAAVQKLLTLIA
                     TGLLPVVSLLALLFIVTLPFTGLEAISARVSATGLLSTLTLMLLLLVAIVNEPQKRVL
                     PYPRVLRGMISASLCVAPIYMLLAGWALWVRIQQYGWTPDRLYGALTASVLLVWSFGY
                     LIGLLRRGRDPDEWQGKVILSVSLLTLVILLLLASPVLDVWRISVNSHMARYHSGKIT
                     ADQISLYMLDHSGKPGQEALKSLRDDEAFTQNRKRNRELMTFLQRNKVPPTADDLARV
                     VMIAPGSQKPDAAFWAFVKEQSYSDASCLEPDACVLVSQDLNGDGQPEQVLYNFIVAE
                     SQVYGLKEGKWTQKAFARLPDGFSKTQLLHAIAGHRLDSAPKAWRDIIVDGQRLDVDY
                     YNE"
     gene            complement(8886..9764)
                     /gene="hslO"
                     /locus_tag="MOX77_002580"
     CDS             complement(8886..9764)
                     /gene="hslO"
                     /locus_tag="MOX77_002580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417860.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HCA3358073.1"
                     /translation="MPQHDQLHRYLFENFAVRGELVTVSETLQQILDNHNYPQSVKTV
                     LAELLVATSLLTATLKFAGDITVQLQGDGPLSLAVINGNNQQQMRGVARVQGDIPDNA
                     DLKTLVGNGYLVITITPEEGERYQGVVGLEGDTLAACLEDYFLRSEQLPTRLFIRTGD
                     VDGKPAAGGMLLQVMPAQNAQAEDFDHLAMLTETIKSEELLTLPANDVLWRLYHEEEV
                     TLYDPQEVEFKCTCSRERCAGALKTLPDEEVDSILAEEGEIDMHCDYCGNHYLFNAMD
                     IAEIRNNASPADPQVH"
     gene            complement(9789..10190)
                     /gene="hslR"
                     /locus_tag="MOX77_002581"
     CDS             complement(9789..10190)
                     /gene="hslR"
                     /locus_tag="MOX77_002581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated heat shock protein Hsp15"
                     /protein_id="HCA3358074.1"
                     /translation="MKEKSSVEVRLDKWLWAARFYKTRALAREMIEGGKVHYNGQRSK
                     PSKIVELNATLTLRQGNDERTVIVKAITEQRRPASEAVALYEETAESVEKREKMAQAR
                     KLNALTMPHPARRPDKKERRDLLRFKHGDSE"
     gene            complement(10201..10869)
                     /gene="yrfG"
                     /locus_tag="MOX77_002582"
     CDS             complement(10201..10869)
                     /gene="yrfG"
                     /locus_tag="MOX77_002582"
                     /EC_number="3.1.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006893127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GMP/IMP nucleotidase"
                     /protein_id="HCA3358075.1"
                     /translation="MHIDIDWQNVDTVLLDMDGTLLDLAFDNYFWQKLVPETYGAQQG
                     ISPQDAQEYIRQQYHAVQHTLNWYCLDYWSERLGLDICAMTTAQGPRAVLRDDTVPFL
                     NALKASGKRRILLTNAHPHNLAVKLEHTGLASHLDLLLSTHTFGYPKEDQRLWRAVTE
                     ETGISAEKTLFIDDSEPILDAAARFGIRYCLGVTNPDSGLAEKHYTRHPSLNDYRRLI
                     PSLK"
     gene            complement(10934..13066)
                     /gene="igaA"
                     /locus_tag="MOX77_002583"
     CDS             complement(10934..13066)
                     /gene="igaA"
                     /locus_tag="MOX77_002583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intracellular growth attenuator protein IgaA"
                     /protein_id="HCA3358076.1"
                     /translation="MSTILIFIAALLACSLLAIWRFRVKSRRGSLPWFSAFQDAQTRK
                     LLPEERSAVENYLDNLSQIQQVPGPTGASAAPISLTLNAESNSVVILTHSITRYGITT
                     DDPNKWRYYLDSVEVHLPPFWEQYINDENNVELILTDTLPLVISLNGHTLQEYMQESR
                     GYALQNTASTQASIRGEESEQIELLNIRQETHEEYALSRPAGLREALLIVASFLLFFF
                     CLITPDVFVPWMIGGAILLLAAGLWGLFAPPSKSALREIHCLRGTPRRWGLFGENNQE
                     QINNISLGIIDLIYPAHWQPYITQDLGQQTDIDIYLDRHVARQGRFLSLHDEVKNFPL
                     QHWLRSTVIAIGSLLVLFMLLFWIPLDMPIKFTLSWMKGAQTIEATTVKQLEKAGVRV
                     GDTLHLSGKGMCNIHSGATWSGQSNSPFMPFDCSQIIWNDAPALPLPESDLVNKAMAL
                     SQAVNRQLHPKPEDDSRVSASLRSAIQKSGMVLLDDFGDIVLKTADLCAAEDECVRLK
                     NALVNLGNSKDWNALVKRANAGKLDGVNVLLRPVSAESLENLVTTSTAPFISRETARA
                     AQSLNSPAPGGFLIASDEGSELVDQAWPSTPLYDYPAQEQWSAFQRLAQTLMQTPFSA
                     EGIVTSVYTDANGTQHISLHRIPDKSGWWRYLGTTLLMLAMIVSAVYNGIQAFRRYQR
                     HRTRMADIQEYYESCLNPRLTVSPENLI"
     gene            13389..13952
                     /gene="nudE"
                     /locus_tag="MOX77_002584"
     CDS             13389..13952
                     /gene="nudE"
                     /locus_tag="MOX77_002584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000045725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP compounds hydrolase NudE"
                     /protein_id="HCA3358077.1"
                     /translation="MSKSLQKPTILKVETVAQSRLFNVESVDLEFSNGVRRVYERMRP
                     STREAVMIVPIVDEHLILIREYAVGTESYELGFSKGLIDPGETVFEAANRELKEEVGF
                     GAHNLTFLKKLSMAPSYFSSKMNIVVAEDLYPESLEGDEPEPLPQVRWPLAHLMDLLE
                     DPDFNEARNVSALFLVREWLKAQGRIA"
     gene            complement(14048..16600)
                     /gene="mrcA"
                     /locus_tag="MOX77_002585"
     CDS             complement(14048..16600)
                     /gene="mrcA"
                     /locus_tag="MOX77_002585"
                     /EC_number="2.4.1.129"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312265.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan glycosyltransferase/peptidoglycan
                     DD-transpeptidase MrcA"
                     /protein_id="HCA3358078.1"
                     /translation="MKFVKYLLILAVCCILLGAGSIYGLYRYIEPQLPDVATLKDVRL
                     QIPMQVYSADGELIAQYGEKRRIPVTLDQIPPEMINAFIATEDSRFYEHHGIDPVGIF
                     RAASVALFSGHASQGASTITQQLARNFFLSPERTLMRKIKEAFLAIRIEQLLNKNEIL
                     ELYLNKIYLGYRAYGVGAAAQVYFGKTVDQLSLSEMAVIAGLPKAPSTFNPLYSMDRA
                     VARRNVVLSRMLSEGYITQAQYDQARSEPIDANYHAPEIAFSAPYLSEMVRQEMYNRY
                     GESAYEDGYRIYTTITRKVQQAAQQAVRNNVLDYDMRHGYSGPANVLWKVGETAWDSK
                     KITDTLKALPTYGPLLPAVVTSANPQEATAALADGTSVSLHMEGMRWARPYRSDTQQG
                     PTPRKVTDVVQTGQQIWVRQVDNDWWLAQVPEVNSALVSLNPQTGAVLALVGGFDFNQ
                     SKFNRATQALRQVGSNIKPFLYTAAMDKGLTLASMLNDVPISRWDAGAGSDWRPKNSP
                     PQYAGPIRLRQGLGQSKNVVMVRAMRAMGVDYAAEYLQRFGFPAQNIVHTESLALGSA
                     SFTPMQVARGYAVMANGGFLIDPYFISKIENDQGGVIFEAKPKIACTECDIPVIYGNT
                     QKSDVLENTNVEEVAVSQEQQNSAVPMPELEQANQALVAQNGTQEYAPHVINTPLAFL
                     IKSALNTNIFGEPGWMGTGWRAARDLKRRDIGGKTGTTNSSKDAWFSGYGPGVVTSVW
                     IGFDDHRRDLGRTTASGAIKDQISGYEGGAKSAQPAWDAYMKAVLEGVPEQPLTPPPG
                     IVTVNIDRSTGQLASGGNSREEYFIEGTQPTQQAVHEVGTTIIDNGETHELF"
     gene            16721..17500
                     /locus_tag="MOX77_002586"
     CDS             16721..17500
                     /locus_tag="MOX77_002586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA utilization protein HofM"
                     /protein_id="HCA3358079.1"
                     /translation="MAFKTWQIGLHIQQHEALAIAVIRGASGWSLQRWWRLPLMNAST
                     AEGTIPDPQSLAHVLRPWSRELPLRHRIYLSFPANRTLQRAFPHPPMRLREREQVAWL
                     SQTMARELDMDPDLLRFDFQDDALSPAFNVTAVQSKEISELLTLAQTLNVRIAAVTPD
                     ACALQRLLPFIPSGRQCLVWRDESQWLWATRYAWGRKSAREAMTLHDLAATLSVVPEH
                     ISLCAEGEFDPWRAVTVRQPPVPPDGYRFAIALGLAMGEIR"
     gene            17500..18039
                     /locus_tag="MOX77_002587"
     CDS             17500..18039
                     /locus_tag="MOX77_002587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilN domain-containing protein"
                     /protein_id="HCA3358080.1"
                     /translation="MAHSVNLLPWRRQHYVARLRLWCVVWGASLLLIASLATIARLVF
                     WQEGRINELLLTAENGRTTALAANIPQLQQRQRQQQARLQRQAQRELTQAWQSILTDL
                     ANLLPEQAWLTSLNYQQETLELEGLARTFDALLTLETSLRHYVSFPLNRTGATRQDAQ
                     GRWQFHYQLTRSAARERAL"
     gene            18023..>18160
                     /locus_tag="MOX77_002588"
     CDS             18023..>18160
                     /locus_tag="MOX77_002588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358081.1"
                     /translation="MNALFDIWYGMSRRGRVFCWCAGVLCLTLTVALSVGYPGWKTLD
                     TQ"
BASE COUNT         3825 a         4881 c         5108 g         4346 t
ORIGIN      
        1 tccacttcca gcactttcac cttcacgatg tcgccagctt ttaccacggt gtgtggatcg
       61 tcgacgaact tagtcgacag ggaagagatg tggaccaggc catcctgatg aacgccgata
      121 tcgacaaacg cgccgaagtt agtgacgtta gtgactgccc cttccagaat catccccggc
      181 agcaggtcgt tcatggtttc gacgccatcg gcgaattgcg cggttttaaa ttcaggacgc
      241 gggtcgcggc ccggtttttc cagctctttg atgatatcgc tcacggtcgg cacgccgaat
      301 ttatcgtcgg taaaatcagc ggccttgagg tgacgcaatt cgttgctgtt gcccatcaga
      361 tcttttagcg cttgctgcgt cgccgccaga atgcgttcga caaccggata ggcttccggg
      421 tggacggtgg aggcatccag cgggttatcg ccgtggttaa tacgcaggaa gcccgcgcac
      481 tgctcaaacg ctttcggccc cagacggctc accttcaaca gttgctggcg gttctggaac
      541 tgaccgttct catcgcgcca ggcgacgatg ttttgcgcca tcatgcgcgt taagcctgcg
      601 acgcgggtca gcagcggtac ggaggcggta ttcaaatcga cgccgacggc gtttacgcag
      661 tcttcgacca ccgcatccag tttacgggcc aattgggtct ggctgacatc gtgttgatat
      721 tggccgacgc cgatcgattt cggatcgatt ttcaccagtt ccgccagcgg atcctgcaga
      781 cgacgcgcga tagagaccgc gccgcgcagg gagacgtcga gatccggaaa ctcctgcgcc
      841 gccagctcag aagcggaata cacggacgcc cccgcttcgc tgacgatcac tttctgcgcc
      901 gtcacgttcg ggaactgttt ctgtacgtcg agatagaaac gttcggtttc acgcgaagcc
      961 gtaccgttgc caatcgcgac cagttcgacg tggtattttt cgcacagcgc ggcgatcacg
     1021 gtagccgctt tggccgcctg accggtatgc ggataaatgg tatccgtcgc caccagcttg
     1081 ccggtgccgt caacgacagc gacttttacg ccggtacgca ggccaggatc aaggcccatc
     1141 gtggcgcgca ggcctgcggg ggctgccatc agcaggtcgt gcaggttacg cgcaaacacg
     1201 ttaatcgctt cgtcttccgc acgttcgcgc acggtgccca tcagttcggt ttcgaggtgc
     1261 attaagactt tgatacgcca cgtccagctc actacgcctt tgcgccagct atccgccggg
     1321 gcgttattta gccgcaggcc gagatggtcc atgatgattt gctcgcagta gctctctttc
     1381 ggcggctcat caaactgtgg gtcggcattg agcgaaagtt gcagaatgcc ttcgttacga
     1441 ccacggaaca tggccagcgc acggtgagac gggacgttag caatgggctc atgatggtcg
     1501 aaatagtcgc ggaattttgc cccttcttcc tctttgccgc tcacgactgt ggcgaccaga
     1561 tgggcattct tccacaggta atcacgcact ttcgccagca atgcggcgtc ttcggcaaag
     1621 cgctccatca gaatgtagcg tgcgccgtcg agcgcggctt tcgtgtccgc cacgcctttg
     1681 tcgccatcaa tgtactttgc cgctttcacg tcaggatcgt gggacggttc gttccagagc
     1741 agatcggcca gcggctcaag gccggcttca atggcgattt gtccacgggt gcggcgttta
     1801 ggtttatagg gcaggtagag gtcttcgagc tcggtcttac ttaacgtagc gttgatggcg
     1861 ccagccagct catcggtcag tttgccttgt tcggaaatgg acttgaggat ggcctgacgc
     1921 ctgtcttcca gctcacgcag atagcccaga cgcgtttcca ggttacgcaa ctgcgtgtca
     1981 tccagaccgc cggtgatttc tttacgataa cgtgcgataa acggcacggt gttcccttcg
     2041 tcaagcaggc gaacggcagc ttcaacctgc ccggcatttg cctggatttc acccgcaata
     2101 atgcggcaga aagaatcatt catcatgggt tagcttcgtc ttcaggataa aaatcagggg
     2161 atagttatac ggattggctg gcaaaaatgc cagccatcag cgggggctta ggattcttct
     2221 tgtcttattt gacgtattcg atcgcattga cgtaccagtt tgcttcgccg acaggggtgt
     2281 tgaccaccgc cagatcgccc acttcttttt tcagtagcgc ccgcgccatc ggcgagtcga
     2341 tagagatgta atccttacgt ccgaaaattt catcgtagcc gacaatgcgg aacttcagcg
     2401 tatcgccgtc atcattttcg atttccaccc aggcgccgaa gaagactttg ccctcctgct
     2461 gcggggaata atccacgatt ttgagatttt ccatgcattt ggtcagatat ctgacgcgtc
     2521 tgtcgatctc acgcaggcgc tttttattat actgatagtc ggcattctcg ctgcggtcgc
     2581 ccagactcgc agcccaggtc acttttttgg tgacctccgg gcgctcttca cgccagagat
     2641 aattgagctc ttgtttgagt gtttcgtacc cttcgcgggt gatcaggggc gttttcatct
     2701 cgttgattta cctttgctgt cgatattgcg cacacggggt ataacgtgat cgtcccgaca
     2761 gaataaataa tggggttgcc gattaattgt atatttaagc tgctgttaaa tatgctttgt
     2821 aacaatttag cctgaaattc ataccagaat ttgctggtga ctcacgtgag cttttttaag
     2881 aatacacact tacatttgtt gcgaaccttt gggagtacag acaatgcaag agaattataa
     2941 gattctggtg gttgatgacg atatgcgtct gcgggcgcta ctggaacgtt atctgaccga
     3001 gcagggcttc caggttcgaa gcgtcgctaa cgccgagcag atggatcgtc tgctgacccg
     3061 tgaatctttc catctcatgg tactggattt aatgctgcca ggtgaagatg gtctgtcgat
     3121 ttgtcgtcgc ctgcgtagtc aaagtaatcc aatgccgatc attatggtca cggcgaaggg
     3181 tgaagaggtt gaccgtatcg tcgggctgga aatcggcgcc gatgactaca ttcctaaacc
     3241 gtttaacccg cgcgagctgt tggcgcgtat ccgcgccgtg ctacgtcgtc aggcaaacga
     3301 actgcccggc gcgccgtcgc aggaagaggc cgttatcgcg ttcggtaagt tcaaactgaa
     3361 cctcggtacg cgcgagatgt tccgtgaaga tgaaccgatg ccgctgacca gcggggagtt
     3421 tgcggtactg aaagcgttag tcagccatcc gcgcgagccg ctctctcgcg acaagctgat
     3481 gaatctggcc cgtggccgcg agtattccgc gatggaacgc tccatcgacg tccagatctc
     3541 ccgcctgcgc cgtatggtgg aagaagatcc ggcgcatccg cgttatattc agaccgtatg
     3601 gggcctgggc tacgtcttcg taccggacgg ttctaaagca tgaggcgaat gcgcttctcg
     3661 ccgcgaagtt catttgcccg cacgctgttg ctcatcgtca ccttgctgtt cgtcagcctg
     3721 gtgacgacct acctggtggt gctgaacttc gcgattttgc cgagcctcca gcagtttaat
     3781 aaggttctgg cttacgaagt ccgtatgctg atgaccgata agctgcaact ggaggacggc
     3841 acgcagttag tcgtgccgcc tgcgtttcgc cgggaaatct atcgcgagct ggggatctct
     3901 ctctacacca acgaagccgc tgaagaggcc gggctgcgtt gggcgcaaca ctacgaattc
     3961 ttaagccacc agatggcgca gcaattaggc ggcccgacgg aagtgcgggt tgaggtcaac
     4021 aaaagctcgc ccgtcgtgtg gctcaaaacc tggctgtcgc ccaatatctg ggtgcgcgtg
     4081 ccgctgaccg agattcatca gggcgatttt tctccgcttt tccgttacac gctggcgatc
     4141 atgctcctgg cgataggcgg cgcgtggctg tttattcgta tacagaacag accgttagtg
     4201 gatcttgaac atgccgcctt gcaggtaggg aagggaatta ttccgccgcc gctgcgtgaa
     4261 tatggcgcct ctgaggtgcg ctctgtgacc cgggcgttta accatatggc agccggcgtg
     4321 aaacaattgg ccgatgaccg tacgctattg atggcgggcg tcagccacga cttacgcacg
     4381 ccgctgaccc gtattcgtct ggcgacggag atgatgggcg aggaagacgg ttatctcgcg
     4441 gagtcgatca ataaagacat cgaagagtgt aacgccatta tcgaacagtt tattgactat
     4501 ctgcgtaccg gtcaggaaat gccaatggag atggcggatc tcaattccgt gctgggcgag
     4561 gtgattgcgg cggaaagcgg ctatgagcgt gagattaaca ctgcgcttca ggcaggcagc
     4621 atccaggtga aaatgcaccc gctctcgatt aagcgcgcgg tggcgaatat ggtggtcaat
     4681 gctgcccgct atggcaactg ctggattaag gtcagcagcg gcaccgagtc gcatcgcgcc
     4741 tggttccagg tagaagatga cgggccgggc attaagccgg agcagcgtaa acatctgttc
     4801 cagccttttg tgcgcggcga cagcgcccgt agcaccagcg gcacagggct ggggctggcg
     4861 attgtgcagc gcattattga taaccataac gggatgctgg agattggcac cagcgagcgt
     4921 ggcggattgt cgattcgcgc ctggctaccg gttcctgtgg ctcgcgtcca ggggacgaca
     4981 aaagaggcat aagaaaggga ggtattaccc tccctttctt cttaacactg gatgacgctg
     5041 ttcaaagccg ccatccggcc tgttccttac agcttcggtc cggcgctaac cagcgcttcg
     5101 cctgccgggg tatccgtata cttctcgaag ttctcaatga acagtttcgc cagcgcggtg
     5161 gctttttcct gccattgttc cggcgacgcg taggtgttac gtgggtcgag aatgtgggta
     5221 tccacgcctg gcagttcagt cgggatcgcc agatcgaaca gcggcaggcg gaaggtttcc
     5281 gcgttatcaa gagaaccgtt cagaatagcg tcaataatcg cgcgcgtatc tttgatggag
     5341 atacgtttgc cggtgccatt ccagccggtg ttaaccagat aagcctgtgc gcctgctgcc
     5401 tgcatacgtt tcaccagcac ctcagcatac tgcgtcgggt gcagcgtcag gaacgcggcg
     5461 ccgaagcagg cggagaaggt gggggtcggt tcggtgacgc cgcgttcggt gccggccagt
     5521 ttagcggtga aacccgacag gaagtggtac tgcgtctggt tagcggttaa acgggaaacc
     5581 ggcggcaaca cgccgaaagc atccgccgtc aggaagataa ccttggtggc gtgacctgct
     5641 ttggatacgg gcttaacgat gttatcgata tgatagatcg ggtaagagac gcgggtgttt
     5701 tcggttttgg aaccatcgtc gaaatctacg gtgccgtctt cgcgcacggt gacgttttcc
     5761 agtagcgcat cacggcgaat cgcatgataa atttctggct ccgcttcttt cgacagtttg
     5821 atggttttgg cgtagcagcc gccttcaaag ttgaacacgc cgtcgtcatc ccaaccgtgc
     5881 tcatcatcgc caatcagacg acgtttcggg tcggtggaca gagtggtttt tccggtaccg
     5941 gaaaggccga agaagaccgc gacatcgcct ttttcaccca cgttggcgga acagtgcatt
     6001 gaggcgatac ctttgagcgg cagcaggtag ttcattaccg agaacatccc ttttttcatt
     6061 tcgccgccgt accaggtgcc gccaataagc tgaatacgtt cagtcaggtt gaacgccacg
     6121 aagttttccg agttcagccc ttgctctttc cactgcgggt tggtgcactt cgcgccgttc
     6181 atgacaataa agtcaggttt gaagcctacc agctcttcgt ccgttgggcg aatgaacata
     6241 tttttaacga agtgggcctg ccaggcgact tccgtaataa agcgcacgga aagacgcgta
     6301 tcggcatttg cgccgcagaa cgcatcaaca atgaataagc gtttaccgga aagctgatgc
     6361 gtcaccagac ctttcaggtg ttgccaggtt tcctgggaaa gcggcttatt atcgttttta
     6421 cctttaccct tatcggacca ccacagcgta tcacgcgtgg tgtcgtcgcg aacaatatac
     6481 ttatccttag gcgaacgacc ggtaaaaata ccggtatcaa cggcaacagc gcccaggtta
     6541 gttaacacgc cacgctcata gccttccaga ccaggattaa gttcttcctg ataaagggtg
     6601 tcgtagctgg gattgtaaac gatatcctgg acgtcgttga taccataagc cttgagatct
     6661 tgcggggtta aattgttaac gcgcatatca ctgctcctta gccaatatat attaccgaaa
     6721 atagtaaggt tttttgaggt tggttaaccg cgacaaggct catagattta cgtatctgga
     6781 caaaatcacg attgacgaaa aacactgtga ctcctgtcac gcagcggcgg ttattatggc
     6841 aggaaaccta cttttgttgt ggaaaatgtt ctgaaaacgt taaaaggaag tgtttttgac
     6901 cgacataatg tgactgtaat cgcattcatg taagaaagtt acgtaacacc aacattaaca
     6961 atatcgattc acctctctgc gtttttttct gaattatgca tgacgacgcc tggcggtgaa
     7021 cagatggtgc aataatgcgg ctttctcatc attctggata acgacatgga aagtgtagcg
     7081 ctttcacgta ctactcgctg gggtatgttg ctcactggtt tgctgcaggg cgtcttgtgc
     7141 tacctgctga tggcctggct ggtaccacaa aatagcgact ggctgttcta tggtatgcct
     7201 gcgacgatag cgttgtcgtc aatgctattg cttaccgtgg tctcttttaa acagcgcgcg
     7261 ctgtggggct ggctggggct gatctttgtg gtcgtgctgg caatgagcgg ctggctgaaa
     7321 tggcaggttg aggcggtgga gaaatggcgc ctggccgagc tcctctggct gtatggtctc
     7381 cggcttgtgt tgatggcgat gctggtatta ccctggatgc aatatcagtt acattcgcaa
     7441 accggttcgg cgcgttatcc ccagttttat ctgcggttat ggcataacgt actgacattg
     7501 tttatcgtcc tggtcgccaa cggactgttc tggctggtgc ttctgctctg gagcgcgcta
     7561 ttcaggctgg tgggcatccg ctttttcagc acccttttct ttgaaactga agcctttatt
     7621 tatgtgacca tcggcctgat tacggcgctg gcggtcattc tcgcccgcac gcagtcgcgc
     7681 cttgtggcgg cggtgcaaaa gctgctgacg ctgatcgcga cgggtttact gccagtggtg
     7741 tcgctgctgg cattgctgtt tattgtgacg ttacccttta ccggactgga ggcgatttct
     7801 gcgcgtgttt ccgctacggg gctgctatcc acgctgacgc tgatgctgct gctcctcgtg
     7861 gcgattgtca acgaaccgca aaagcgcgta ttaccctatc cgcgcgtact acgcggcatg
     7921 attagcgcct cgctgtgcgt tgccccgata tatatgctgc tggcgggctg ggcgttatgg
     7981 gtacgcattc agcaatacgg ctggacgccg gatcgtctgt atggcgcgct gacggcgtct
     8041 gtcttgctgg tatggtcctt cggttatctg atcggtctgt tacgccgcgg acgcgaccct
     8101 gatgagtggc aaggcaaggt gatactgagc gtctctttgt tgacgctggt gatattgctg
     8161 ttgctggcct cgcctgtact tgatgtctgg cgtattagcg tcaacagcca tatggcgcgt
     8221 taccatagcg gtaaaattac tgcggatcag atcagcctgt atatgctgga tcacagcggc
     8281 aaacctggcc aggaagcgct gaaatcgttg cgggatgacg aggcgtttac gcagaacaga
     8341 aagcgcaatc gtgaactgat gacgtttttg cagagaaata aggtccctcc gacggcggac
     8401 gatttagcgc gggtggtgat gattgcgccc ggtagccaga agccggatgc cgcattttgg
     8461 gcgtttgtca aagagcagag ttattcggac gcttcctgcc ttgaaccgga tgcctgcgtg
     8521 ctggtgagtc aggatcttaa cggcgacggt cagcctgagc aggtgctgta taactttatt
     8581 gttgccgaga gccaggtcta cggcttaaaa gaggggaaat ggacgcagaa agcgttcgcc
     8641 cgattgccgg acgggttttc taagacgcaa ctgttgcacg cgattgccgg gcatcggtta
     8701 gactcagccc ccaaagcctg gcgcgatatc attgttgatg gtcagcggtt ggatgtggat
     8761 tactacaacg agtaagcttt ttgccggatg gcggcataaa tgccttatcc agcctacgga
     8821 gcgggatgct gtaggccaga taagcgtagc gccatcaggc aatgacgctg ccgactacga
     8881 ggcgattaat gaacctgtgg atcggcagga gaggcgttgt tacggatctc cgcgatatcc
     8941 atcgcattga acaggtaatg attgccgcag taatcgcagt gcatatcgat ttcgccttct
     9001 tccgccagaa tgctgtccac ttcttcatcc ggcaatgttt tcagcgcgcc cgcgcaacgt
     9061 tcgcgtgaac aggtgcattt gaattcaacc tcttgcggat cgtagagcgt gacttcttct
     9121 tcgtgataca aacgccacag cacgtcattt gccggtaatg tcagcagctc ttcgctttta
     9181 atggtttccg tcaacatggc cagatggtcg aaatcctccg cctgcgcgtt ctgtgccggc
     9241 atcacctgga gcaacattcc acctgccgcc ggtttaccgt cgacatcgcc ggtacggata
     9301 aacaggcgcg tcggcaactg ctcggagcgc aggaagtaat cttccaggca cgccgccaga
     9361 gtatcgcctt ccagacccac cacgccctga tagcgttcac cctcttccgg cgtaatggtg
     9421 atcaccagat agccgttgcc aaccagcgtt ttgagatccg cattgtcagg gatatcgccc
     9481 tgaacgcgag ccacgccgcg catctgctgc tgattattgc cattgatcac cgccaggctt
     9541 aacggcccgt cgccctggag ctgtaccgta atgtcaccgg caaacttcag cgtcgcggtc
     9601 agcaggctag tggcgaccag cagttcggcc agtacggttt tcaccgactg cggatagtta
     9661 tgattgtcga ggatctgttg caaggtttcc gaaacggtca ccagctcgcc gcgaacggca
     9721 aagttttcaa acagataacg atgtaattgg tcatgttgcg gcataatcat ctctcttgcg
     9781 ggtgacagtt attcgctgtc gccgtgttta aatcgtaaca ggtcgcggcg ctctttcttg
     9841 tccggtcgcc tggccggatg cggcatggtc agggcgttaa gcttgcgcgc ctgcgccatt
     9901 ttttcgcgtt tttccacgct ttccgccgtc tcttcataca gagcgacggc ttcgctggcc
     9961 ggacggcgct gttcggtgat ggctttaacg atcaccgtcc gttcgtcatt tccctgacgc
    10021 agggtaaggg ttgcgttcag ctcgacgatt ttgctcggct tactgcgctg gccgttgtaa
    10081 tgcaccttac cgccttcaat catctcgcgg gccagcgcgc gggttttata aaaacgcgcg
    10141 gcccacagcc atttatccag tctgacctca acggaggact tttctttcat ggcgtctcct
    10201 tcacttcagc gaggggatca gacggcggta gtcgttcagg gacggatggc gcgtatagtg
    10261 cttttccgcc agaccggaat cgggattcgt cacgccaaga cagtagcgaa taccaaaccg
    10321 ggcggcggcg tcgagaatcg gttcgctgtc atcgataaac agcgttttct ctgcgcttat
    10381 tcccgtttcc tcagtgacag cgcgccataa ccgctgatcc tctttgggat aaccaaatgt
    10441 gtgggtggaa agtaataaat caaggtgtga ggccagaccg gtatgctcca gcttcaccgc
    10501 caggttatgt ggatgcgcat tggtgagcag aatccgacgt tttccgctgg cttttaacgc
    10561 attcagaaac ggtacggtat cgtcgcgcaa aacggcgcgc ggcccttgcg ccgtcgtcat
    10621 ggcgcaaata tccagaccca gacgctcgct ccagtaatcc agacagtacc agtttagcgt
    10681 atgctgtacg gcatgatact gctggcgaat atattcctgc gcgtcctgcg gcgaaatacc
    10741 ctgctgcgcg ccgtaggttt ccggtaccag cttttgccag aaatagttat cgaacgcgag
    10801 atcgagcagc gtgccgtcca tatccagcaa aacggtatcc acgttttgcc agtcaatatc
    10861 aatatgcatg gggaactcca gggtaacgca atttgcgcga cagggtagca taccctgtcg
    10921 cacggcggcg ctatcagatg agattttccg gagagacggt taacctggga ttgaggcagc
    10981 tttcatagta ttcctggatg tccgccatac gggtacggtg gcgttgataa cgcctgaacg
    11041 cctgaatgcc gttgtagacc gcgctcacta tcattgccag catcagcagc gtggtgccga
    11101 ggtaacgcca ccagccggat ttatcgggga tacgatgcag gctgatatgc tgcgtgccgt
    11161 tggcatcggt atacacgctg gtgacaatgc cctcggcgct aaatggcgtc tgcatgagcg
    11221 tttgcgccag acgctggaag gcgctccact gttcctgcgc gggatagtca tacagcggcg
    11281 ttgacggcca ggcctgatca accagttcgc tgccttcatc gctggcgatc aggaatccgc
    11341 cgggagcggg gctattcagc gactgggcgg cacgcgcggt ctcgcgagaa ataaacggcg
    11401 ccgttgaggt cgtgaccaga ttttccagcg actctgcgct tacggggcgt agcagcacgt
    11461 tgacgccgtc cagtttgccg gcgttcgcgc gtttcaccag cgcgttccag tccttactgt
    11521 taccgagatt aaccagcgca tttttcaggc gcacgcactc gtcttccgcc gcgcacaaat
    11581 cagcggtttt cagaacaata tcgccaaagt catctaataa taccatgccc gatttttgga
    11641 tcgcggagcg taaagatgcg cttacgcgcg agtcgtcttc gggttttgga tggagctgac
    11701 gatttaccgc ctggcttagc gccatcgctt tattcaccag atctgattcc ggcagcggta
    11761 gcgcaggcgc gtcattccag atgatttgcg agcaatcgaa cggcataaac ggtgagttag
    11821 actgcccgct ccaggtcgcc ccggaatgaa tattacacat tcctttaccg ctcaggtgca
    11881 gcgtatcgcc cacccgtacg ccagcctttt caagctgttt taccgttgtc gcttcaatgg
    11941 tttgcgcgcc tttcatccac gatagcgtga acttgattgg catatccaac gggatccaga
    12001 acagcagcat aaacaacacc agcagcgaac cgatagcaat aacagtgctg cgtaaccagt
    12061 gctgcaacgg gaagtttttc acttcatcat gcagggataa aaaacggccc tggcgggcga
    12121 catggcgatc aaggtaaata tcaatatccg tttgttgccc aagatcctgc gtaatgtaag
    12181 gttgccagtg ggcagggtaa ataaggtcga tgatgcccag ggaaatattg ttaatctgct
    12241 cctgattatt ctccccaaac agtccccagc ggcggggcgt tccccgcaga cagtgaattt
    12301 cccgcagcgc gcttttcgac ggcggcgcaa aaagccccca aagtccggct gccagcagca
    12361 ggatcgcgcc gcctatcatc cacggtacaa aaacgtctgg cgttatcaga cagaaaaaga
    12421 ataacaaaaa ggaggcgacg attaacaatg cttcgcgcaa gccagccggg cggctgagcg
    12481 catattcttc gtgggtctcc tgacggatgt tcaacagctc aatctgctcg ctctcttcgc
    12541 cgcgaatcga cgcctgcgta gaggccgtat tctgtagcgc gtagccgcgc gactcctgca
    12601 tatactcttg cagcgtatgg ccgtttaaag agatcaccag cggcagcgta tccgtgagga
    12661 ttagctcaac gttgttttca tcattgatgt actgttccca gaaaggcggc agatggactt
    12721 cgacggagtc gaggtagtag cgccatttat taggatcgtc agtggtaatg ccgtagcggg
    12781 tgatggagtg ggtcagtatc acgacactgt tgctttccgc gttcagcgtc agcgagatgg
    12841 gcgcagcact ggcgcctgtc ggccccggaa cttgctggat ctggctaagg ttatcgagat
    12901 agttttctac cgcgctgcgc tcttcgggca acagtttacg cgtttgcgcg tcctgaaagg
    12961 cgctgaacca cggtaagctc cctcgtctgg actttacccg gaaccgccat attgccagta
    13021 gagagcaggc cagcaaagca gctataaaaa tcagaatggt gctcatgctt tccccatctt
    13081 actaagtctg tcaggcgtgg tcagtcgcac cctgtccaat aaacattttt ctgtggttgg
    13141 ctatcggcaa gcgtggagtt gaacttgagc attgtaaagc gcatcccagt gaaggcaaat
    13201 catagcaata ccaccaaaaa cggaatatca gcaaattcct ggagttattt caacctattg
    13261 acttttaatt tgaaataaga attaattttt attacgttac ataaatgtaa ataaacggca
    13321 attcgcattg ccgaaaccgt gcggtatgtc gcacaatgac cacagattac actgcaaaga
    13381 ttctcacaat gagcaaatca ttacaaaaac ccaccattct gaaagtggaa accgtcgcac
    13441 aatcccgact gtttaacgta gaaagcgtgg atctggagtt cagcaacggc gtgcgtcgcg
    13501 tgtatgaacg tatgcgacca tcaacccgtg aggcggtaat gattgtgccg atcgttgatg
    13561 agcatctgat tcttattcgt gagtatgcgg tgggaaccga atcctatgag ctgggcttct
    13621 cgaaaggatt gatcgacccg ggcgagaccg tttttgaagc ggcgaaccgg gagctcaaag
    13681 aagaggtcgg gtttggcgcg cataacctga ccttcttaaa aaaactcagc atggcgccct
    13741 cttatttttc cagcaaaatg aatatcgtgg tggcggaaga tctctatccg gagtcgctgg
    13801 aaggcgacga gcctgagcca ttgccgcagg tacgctggcc gctggcgcat ttaatggatc
    13861 tgctggaaga ccccgatttt aacgaggccc gcaacgtcag cgcgctgttt ctggtacgcg
    13921 agtggttgaa agcgcagggc cgaattgcct gatggcgcgg cgttgatcaa gccaacggaa
    13981 agtttgtctc cccgttcgcc gtcatccgct aaacacaata aaaaaggcgc cggagcgcct
    14041 tttttgatca gaacagttcg tgtgtttcac cattatcaat aatggtggtt cccacctcgt
    14101 gtaccgcctg ttgtgtcggc tgcgtgcctt cgatgaaata ctcttcacgg ctgttaccgc
    14161 cgctcgccag ttgtccggta ctgcggtcga tattcaccgt gacgatgccc ggcggcggcg
    14221 ttagcggctg ttccggcacg ccttccagca cggctttcat ataggcgtcc catgcaggtt
    14281 gcgcgctctt cgcgccgccc tcatagccgg agatttgatc tttgatcgcg ccggaagcgg
    14341 tggtgcggcc taaatcacgg cggtgatcgt caaagccgat ccatacggaa gtgacgacgc
    14401 caggaccata gccggagaac catgcgtctt tcgagctgtt ggtcgtaccg gttttgccgc
    14461 cgatatcgcg acgtttaagg tcgcgcgccg cacgccagcc ggtacccatc cagccgggtt
    14521 cgccgaagat attggtgttc agcgcgcttt tgatcagaaa cgccagcggc gtattgatca
    14581 catgcggcgc gtactcctgc gtgccgtttt gcgcgaccag cgcctggttt gcctgttcca
    14641 gctcaggcat cggtacggcg ctgttttgct gctcttgcga aaccgcgacc tcttccacat
    14701 tggtgttttc cagcacgtcg gatttctgcg tattgccgta aatgaccggg atatcgcact
    14761 ccgtgcaggc gattttcggt ttcgcttcga agatcacgcc gccctgatcg ttctcaatct
    14821 tgctgatgaa atacgggtcg atcaggaaac cgccgttcgc catcaccgca taaccgcgcg
    14881 caacctgcat cggcgtgaag gaggcggagc ccagcgccag cgattcggta tgcacgatat
    14941 tctgcgccgg gaagccgaag cgttgcagat actccgccgc atagtcgacg cccatggcgc
    15001 gcatggcgcg taccatcacc acgtttttcg actgccccag cccctggcgt aaacgaatcg
    15061 gtccggcgta ctgcggcgga gagtttttcg gacgccagtc tgaaccggcc ccggcgtccc
    15121 agcgggaaat cggcacatcg ttgagcatac tggcgagcgt caggccttta tccattgcgg
    15181 cggtgtagag gaacggtttg atgttcgacc ccacctgacg caaagcttgc gtcgcgcggt
    15241 taaatttact ctgattaaaa tcgaaaccgc cgaccagcgc cagtaccgcg ccagtttgcg
    15301 ggttaagcga aaccagcgcg gagttcactt ccggtacctg cgccagccac cagtcgttat
    15361 ccacctgacg aacccagatt tgctgacctg tctggacgac atcggtaact ttacgcggcg
    15421 tcggcccctg ctgtgtatcc gagcggtaag gccgcgccca acgcattcct tccatatgta
    15481 gcgaaacgga cgtaccgtcg gcaagcgcag cggtcgcctc ttgcggatta gcgctggtga
    15541 ccacggcggg aagcagcggt ccgtaggtcg gcaacgcttt caacgtatcg gtaatttttt
    15601 tactgtccca cgccgtttcg cccactttcc atagcacatt cgccgggccg ctataaccgt
    15661 ggcgcatgtc atagtccagc acgttattac gcaccgcctg ttgcgcggcc tgctgcactt
    15721 tgcgggtgat ggtcgtgtaa atacgataac catcttcata ggcgctttcg ccataacggt
    15781 tatacatttc ctggcgcacc atttccgaca gataaggcgc ggagaaggcg atttccggcg
    15841 cgtgataatt tgcgtcgata ggttcgctac gggcctgatc gtactgcgcc tgagtgatat
    15901 atccctcgct taacattcgt gagagcacta cgttacggcg cgccaccgcc cgatccatcg
    15961 agtagagcgg gttaaaggta gaaggcgctt taggtagccc ggcgataacc gccatttcgc
    16021 ttaaactaag ctggtcgacc gtcttaccaa agtagacctg tgccgccgcg ccaacgccat
    16081 aggcgcggta gccgagatag atcttgttca gatagagttc gaggatctca tttttattca
    16141 gcaactgctc aatacgaatc gccagaaacg cttccttgat cttgcgcatc agcgtgcgtt
    16201 cggggctaag gaagaagttt cgcgccagtt gctgggtaat ggtacttgct ccctgcgatg
    16261 cgtgaccgga gaagagcgcg acgctggccg cacggaaaat acctaccggg tcaataccgt
    16321 gatgctcata aaagcggcta tcttcggtgg cgataaaggc gttgatcatt tccggcggaa
    16381 tttgatcgag cgtaacggga atacggcgtt tttcgccata ttgcgcgata agttcgccat
    16441 ccgcgctgta aacctgcatc ggaatttgta aacgcacatc tttcaatgtc gcgacgtcag
    16501 gtagctgcgg ctcaatatag cgataaaggc cataaatcga gcctgctccc agcaggatgc
    16561 aacatactgc aaggatcaat aaatacttta cgaacttcac tggagatttc ccatttagtg
    16621 tcatttgggc agtttataaa caaacgcgcg gtagtataaa ggcaagccag acgcattgat
    16681 atacccgtta acgcgacggg tgataaggag atcgaccgtt atggctttta aaacctggca
    16741 aataggattg catattcagc agcatgaagc gctggccatc gccgttattc gcggcgcatc
    16801 gggctggtcc ctgcaacgtt ggtggcgact gccgctgatg aacgcctcca cggcagaggg
    16861 tacgattcct gacccgcaat cgctggctca cgtactgcga ccctggagcc gcgagctgcc
    16921 gctacgtcac cgtatttatc tctcttttcc cgcaaatcgg acattgcaac gcgcttttcc
    16981 acatccgccg atgcgtctgc gggaacgtga gcaagtcgca tggctttcac aaacgatggc
    17041 gcgtgagctg gatatggatc cggacttatt gcgtttcgac tttcaggacg atgcgctgag
    17101 ccccgcgttc aacgttaccg ccgtgcaaag caaagaaatt tcagagctgt taacgctggc
    17161 gcaaacgctc aatgtacgca tcgctgctgt aacgcccgat gcctgcgcgt tacagcgctt
    17221 gctgccgttt ataccttcgg ggcggcaatg tctggtctgg cgcgatgaaa gccagtggct
    17281 gtgggcgacg cgctatgcgt gggggcgtaa atcggcgcga gaggcgatga cgctgcatga
    17341 ccttgccgcg acgttatccg tcgtgccgga acatatttcg ttatgcgccg aaggcgaatt
    17401 cgacccctgg cgcgccgtta ccgtccgcca accgccggtt ccgccggacg gttatcgctt
    17461 tgcgattgcg ctgggtttag ccatggggga gatacgctga tggcgcattc tgtcaatttg
    17521 cttccctggc ggcgccaaca ttatgtagcg cgtctgcggc tgtggtgcgt ggtatggggc
    17581 gcgtccctgc tgctgatagc aagcctcgcg acgatcgccc ggttggtttt ttggcaggag
    17641 gggaggatta atgaactgct actgacggcg gaaaacggac gcacgacggc gcttgcggcg
    17701 aacataccgc agttgcagca gcgtcagcga cagcaacagg cgcgattaca acgtcaggcg
    17761 cagcgtgaac tgacgcaagc ctggcaatct atcttgactg accttgccaa cctgttgcca
    17821 gagcaggcat ggctgacaag cctcaattat cagcaagaga cgctagagct ggaagggctg
    17881 gcgagaacgt ttgacgccct gctcacgctt gagacatcac ttcgtcacta tgtcagtttt
    17941 ccgctaaacc gcacgggcgc cacgcggcag gatgcgcaag ggcgctggca gttccattat
    18001 cagttaacga ggagcgccgc ccgtgaacgc gctctttgat atctggtacg ggatgtcgcg
    18061 ccgtggtcgg gttttttgtt ggtgtgcagg cgtgctgtgc ctgacgctga cggtcgcgtt
    18121 atctgtgggc tatcccggct ggaagacgct ggatacgcaa
//
LOCUS       DAGWFR010000074        17907 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.075, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000074 DAGWFR010000000
VERSION     DAGWFR010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 17907)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17907)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17907
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.075"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(40..2676)
                     /gene="gyrA"
                     /locus_tag="MOX77_002589"
     CDS             complement(40..2676)
                     /gene="gyrA"
                     /locus_tag="MOX77_002589"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit A"
                     /protein_id="HCA3358082.1"
                     /translation="MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPV
                     HRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYML
                     VDGQGNFGSIDGDSAAAMRYTEIRLAKIAHGLMADLEKETVDFVDNYDGTEKIPDVMP
                     TKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDNEDISIEGLMEHIPGPDFP
                     TAAIINGRRGIEEAYRTGRGKVYIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEK
                     IAELVKDKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINM
                     VALHHGQPKIMNLKDIISAFVRHRREVVTRRTIFELRKARDRAHILEALAIALANIDP
                     IIELIRRAPTPAEAKAALISRPWDLGNVAAMLERAGDDAARPEWLEPEFGVRDGQYYL
                     TEQQAQAILDLRLQKLTGLEHEKLLDEYKELLEQIAELLHILGSADRLMEVIREEMEL
                     IRDQFGDERRTEITANSADINIEDLISQENVVVTLSHQGYVKYQPLTDYEAQRRGGKG
                     KSAARIKEEDFIDRLLVANTHDTILCFSSRGRLYWMKVYQLPEASRGARGRPIVNLLP
                     LEANERITAILPVREYEEGVNVFMATASGTVKKTALTEFSRPRSAGIIAVNLNDGDEL
                     IGVDLTSGSDEVMLFSAAGKVVRFKEDAVRAMGRTATGVRGIKLAGDDKVVSLIIPRG
                     EGAILTVTQNGYGKRTAADEYPTKSRATQGVISIKVTERNGSVVGAVQVDDCDQIMMI
                     TDAGTLVRTRVSEISVVGRNTQGVILIRTAEDENVVGLQRVAEPVDDEELDAIDGSVT
                     EGDEDIAPEAESDDDVADDADE"
     gene            complement(3086..4288)
                     /locus_tag="MOX77_002590"
     CDS             complement(3086..4288)
                     /locus_tag="MOX77_002590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mandelate racemase/muconate lactonizing enzyme
                     family protein"
                     /protein_id="HCA3358083.1"
                     /translation="MKITSIEVFDCELKKRDQTMSSYNPVLIRVNTDSGLSGIGEVGL
                     AYGAGAKAGVGIIRDLASLIVGEDPLNIEKIWEFFFRKTFWGMGGGNVFYAGMSAIDI
                     ALWDIKGKYLGVPVYQLLGGKTNEKLRTYASQLQFGWGDKRQILVTPEEYAEAARAAL
                     DDGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARIAAMREAMGDDAD
                     IIVEIHSLLGTNSAIQFAKAIEKYRIFLYEEPSHPLNSDNMQKVSRSTTIPIATGERS
                     YTRWGYRELLEKQSIAVAQPDLCLCGGITEGKKICDYANIYDTTVQVHVCGGPVSTVA
                     ALHMETAIPNFIIHEHHTNAMKASIRELCTHDYQPENGYYVAPEQPGLGQELNDEVVK
                     EYLAYVIK"
     gene            complement(4303..5628)
                     /locus_tag="MOX77_002591"
                     /pseudo
     CDS             complement(4303..5628)
                     /locus_tag="MOX77_002591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461216.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            5678..6562
                     /locus_tag="MOX77_002592"
     CDS             5678..6562
                     /locus_tag="MOX77_002592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461217.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HCA3358084.1"
                     /translation="MLRKKQYNSKANVSYLIYQQANLMKYTITTIKYVNFLISDILDP
                     LILNKLITMEPGLTMEEKKMKNRLKRDFSHISIEIPKSITQVIKEKIREMIIHGDFDL
                     GQAISENELSNILMISKTPIREAFIWLSYNENLVNIIPRSGTFVFSVTDEDINDLIKM
                     RVILEQGAIREAMEKNANNVIVELSNILSKSAKINAERDTQAYLKLDHDFHYVFVKYA
                     DNKYISQAHLLISARLLAIRYRLDFTAEYITSSNRGHATILDMLKNNNVEGVCNFITH
                     HIGSGFTERARKLLALKA"
     gene            6645..7373
                     /locus_tag="MOX77_002593"
     CDS             6645..7373
                     /locus_tag="MOX77_002593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 3-demethylubiquinone
                     3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol
                     methylase"
                     /protein_id="HCA3358085.1"
                     /translation="MNTEKPSVAHNVDHNEIAKFEAVASRWWDLKGEFKPLHRINPLR
                     LGYITERSGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESG
                     IEVEYVQETVEEHAAKHAQQYDVVTCMEMLEHVPDPQSVVHACAQLVKPGGEVFFSTL
                     NRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLSWVDETVLKEQHITGLHYNP
                     ITNTFKLGPGVDVNYMLHTRAKKA"
     gene            7728..10013
                     /gene="nrdA"
                     /locus_tag="MOX77_002594"
     CDS             7728..10013
                     /gene="nrdA"
                     /locus_tag="MOX77_002594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HCA3358086.1"
                     /translation="MNQSLLVTKRDGRTERINLDKIHRVLDWAAEGLNNVSVSQVELR
                     SHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAFGQFEPPAL
                     YHHVVKMVELGKYDNHLLEDYTEEEFKQMDSFIVHDRDMTFSYAAVKQLEGKYLVQNR
                     VTGEIYESAQFLYILVVACLFSNYPRETRLDYVKRFYDAVSTFKISLPTPIMSGVRTP
                     TRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHT
                     GCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMD
                     YGIQINKLMYTRLLKGGDITLFSPSDVPGLYDAFFADQDEFERLYVKYENDDSIRKQR
                     VKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPVVAPVRQSNLCLEIALPTKPLN
                     DVNDENGEIALCTLSAFNLGAIKTLDELEELAILAVRALDALLDYQDYPIPAAKRGAM
                     GRRTLGIGVINFAYWLAKNGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACP
                     WFNETTYAKGILPIDTYKKDLDAIVNEPLHYDWEQLRESIKTHGLRNSTLSALMPSET
                     SSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLKDAYELLWEMPNNDGYLQLV
                     GIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAED
                     AQDDLAPSIQDDGCESGACKI"
     gene            10126..11256
                     /gene="nrdB"
                     /locus_tag="MOX77_002595"
     CDS             10126..11256
                     /gene="nrdB"
                     /locus_tag="MOX77_002595"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006683700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide-diphosphate reductase subunit
                     beta"
                     /protein_id="HCA3358087.1"
                     /translation="MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQ
                     LSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISI
                     PELETWVETWAFSETIHSRSYTHIIRNIVNDPAVVFDDIVTNEQIQKRAEGISAYYDE
                     LIEMTSYWHLLGEGTHTVNGKTVVVNLRELKKKLYLCLMSVNALEAIRFYVSFACSFA
                     FAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDL
                     FVQAAQQEKEWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIP
                     WINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLSNFQL"
     gene            11256..11510
                     /gene="yfaE"
                     /locus_tag="MOX77_002596"
     CDS             11256..11510
                     /gene="yfaE"
                     /locus_tag="MOX77_002596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-like diferric-tyrosyl radical
                     cofactor maintenance protein YfaE"
                     /protein_id="HCA3358088.1"
                     /translation="MGRVTLRITGTQLLCQDEHPSLLAALESHNVEVEYQCREGYCGS
                     CRTRLVAGQVDWITEPLAFIQPGEILPCCCRAKGDIEIEM"
     gene            complement(11512..12702)
                     /locus_tag="MOX77_002597"
     CDS             complement(11512..12702)
                     /locus_tag="MOX77_002597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3358089.1"
                     /translation="MKEKLWTKDFWAITIVSFIIFFVFYVLLTLLPIYIADRLHASAD
                     KAGLLVTCFLAAAIVIRPFAGQWVGKYSNKKILVLSSLAFLVITALYPVCHSIESLLF
                     IRVLHGITFGVITTVKGTISARLIPASRRGEGISFFSLAMGLAMVVGPWIGLNMARWD
                     AFTAAFWLCSAVAALEIVLSLIVTVPPVIRHADGSKPNLGFSAMFDRAALPFALVTFF
                     MTFSYAGVSAFLALYARELDLMAAASNFLLCYAILLMICRTFTGNICDKKGPKYVVYP
                     CLLAFTIGLVALGYTNGSIMMIISGGLIGIGYGSVTPVFQTQIISSVEPHKIGVANSL
                     FFNAMDAGMAIGAFIMGMMVESVGYRMIYVAGAVLVVLAGALYAVQMKKRGVMPLVST
                     SELH"
     gene            12864..13742
                     /locus_tag="MOX77_002598"
     CDS             12864..13742
                     /locus_tag="MOX77_002598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCA3358090.1"
                     /translation="MTLTQIHALLAVLEYGGFTEASKRLYMTQSAVSQAISALEEELG
                     VDILIRERRKEIELTAAGSRIVRHLRAIQRDVNAVKEIVEQEKKNPARTLRIGCFPSA
                     CACILPGVIRYFESHHPNVKIIPYEENSTAIIDSLQDGSIDAGFVPFPVNGMYCVPIY
                     RDKFTVVVPENHPLAANSTVTVEELMDEPLIVSKGRYELSIMALFKEKGIEPIFKYEF
                     NHPDTALNFIRQGLGIALLPELTLKATTGKLCSVALEPTFYRQISLLAKEPPVEGSPL
                     FLLQKCMETLTDEGLL"
     gene            complement(13858..14928)
                     /gene="glpQ"
                     /locus_tag="MOX77_002599"
     CDS             complement(13858..14928)
                     /gene="glpQ"
                     /locus_tag="MOX77_002599"
                     /EC_number="3.1.4.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HCA3358091.1"
                     /translation="MKTTLKNLSVALMLAGMTIGSGAVAAEKVVIAHRGASGYLPEHT
                     LPAKAMAYAQGADYLEQDLVMTKDDHLVVLHDHYLDRVTDVADRFPDRARKDGRYYAI
                     DFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRIHTFEEEIEFVQGLNHSTG
                     KNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYIGKQDNVYLQCFDVAELKRIKNE
                     LEPKMGMDLNLVQLIAYTDWNETQQKQPDGRWVNYNYDWMFKPGAMKQVAEYADGIGP
                     DYHMLVAEGSTKGNIKLTGMVQDAHQNKMVVHPYTVRADQLPDYATDVNQLYDILYNK
                     AGVDGLFTDFPDKAVMFLQKND"
     gene            complement(14933..16291)
                     /gene="glpT"
                     /locus_tag="MOX77_002600"
     CDS             complement(14933..16291)
                     /gene="glpT"
                     /locus_tag="MOX77_002600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate transporter"
                     /protein_id="HCA3358092.1"
                     /translation="MLSIFKPALHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLV
                     RKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLIL
                     AAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPSCGRTMVHWWSQKERGGIVSV
                     WNCAHNVGGGIPPLLFLLGMAWFNDWKAALYMPAFGAIVVALFAFAMMRDTPQSCGLP
                     PIEEYKNDYPDDYNEKAEEELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWS
                     PTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGASGVFFMTLVTI
                     ATIVYWMNPAGNPNVDMACMIIIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFG
                     YLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLVVVMIGEKRHHDELQLKRN
                     GG"
     gene            16524..>17907
                     /gene="glpA"
                     /locus_tag="MOX77_002601"
     CDS             16524..>17907
                     /gene="glpA"
                     /locus_tag="MOX77_002601"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic glycerol-3-phosphate dehydrogenase
                     subunit A"
                     /protein_id="HCA3358093.1"
                     /translation="MKTRDSQASDVIIIGGGATGAGIARDCALRGLRVILVERHDIAT
                     GATGRNHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTDGLFITLPEDGLA
                     FQATFIRACEAAGIRAEAIDPQQARIIEPSVNPALIGAVKVPDGTVDPFRLTAANMLD
                     AREHGAIVLTAHEVTGLIREGATVCGVHVRNHLTGETQTLHAPVVVNAAGIWGQRIAE
                     YADLSIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPSDTISLIGTTSTHIDYN
                     EIDSNRVTADEVDILLREGEKLAPVMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIV
                     LFDHAERDGLDGFITITGGKLMTYRLMAEWATDAVCRKLGNTRPCITADTPLPGSKES
                     TEHTLKRIISLPAPLRGSAVYRHGDRTPGWLSEGRQHRSLVCECEAVTAGEVQYAVEN
                     LTVNSLLDLRR"
BASE COUNT         4681 a         4728 c         4259 g         4239 t
ORIGIN      
        1 aaaaagggcc ggatatccgg ccctcgcaca gcaataatat tactcgtcag cgtcatccgc
       61 aacgtcgtca tcgctttccg cttccggggc gatatcctca tccccttccg tcacgctgcc
      121 gtcgatagca tcgagttctt cgtcatctac cggttcagca acgcgttgca gacccactac
      181 gttttcatct tccgccgtgc ggataaggat aacgccctgg gtattacgtc ccaccacgct
      241 gatctcagac actcgggtac gcaccagagt accggcatcc gtgatcatca tgatctggtc
      301 gcaatcgtct acctgtaccg caccgacaac ggaaccgttg cgctcggtca ctttgataga
      361 gataacgccc tgcgtcgcac gagacttggt cgggtactcg tccgctgcgg tacgcttccc
      421 gtagccgttt tgcgttacgg tcagaatagc gccttcgccg cgtgggatga tcagagaaac
      481 tactttatcg tctcccgcca gcttaatacc gcgcacaccg gtcgcggtac gccccatcgc
      541 acggacggcg tcttctttga agcgcaccac tttacccgcg gccgagaaca gcatgacttc
      601 gtcagaacca gaagtcaggt caacgccaat cagctcgtcg ccgtcgttga ggtttaccgc
      661 gataataccg gcggaacgcg gacggctgaa ttcggtcagc gccgttttct tcacggtacc
      721 gctggcggtc gccataaaga cgttgacgcc ttcttcgtac tcacgaaccg gcagaatcgc
      781 ggtgatacgt tcgttggctt ccagcggcag caggttaacg atcggacgac cgcgcgcgcc
      841 acggctggct tccggcaact gatagacctt catccagtac agacggcccc ggctggagaa
      901 gcaaaggatg gtgtcatggg tgttggccac cagcaggcgg tcgataaagt cttcttcttt
      961 aatacgtgct gctgatttgc ctttaccgcc acgacgctgt gcttcgtaat cggttaacgg
     1021 ctgatatttc acatagccct gatgagacaa ggttacgaca acattttcct ggctaatcag
     1081 atcttcgata ttaatatcgg cgctgttggc ggtgatttcg gtacgacgct catcgccgaa
     1141 ctgatcgcga attaactcca tctcttcgcg gatcacttcc atcaggcgat cggcgctgcc
     1201 cagaatgtgc agcagttcag cgatctgctc cagcaactct ttgtattcgt cgagcagttt
     1261 ttcatgctcc aggccggtca gtttctgcaa acgcagatcc agaatcgcct gcgcctgctg
     1321 ttcagtcagg tagtattgac cgtcacgcac gccaaattct ggctccagcc attccggacg
     1381 cgcggcgtcg tcaccggcgc gctccagcat cgcagcaacg ttgcccagat cccacggacg
     1441 cgaaatcagc gccgctttcg cttccgccgg cgtcggcgcg cggcgaatca gttcgataat
     1501 cgggtcgatg ttggccagcg caatcgccag agcttcaagg atatgcgcac gatcacgggc
     1561 tttacgcagt tcaaaaatag tccgacgcgt caccacttca cggcggtggc gcacgaacgc
     1621 tgaaataata tctttcaggt tcatgatctt cggctggccg tgatgcagcg ccaccatgtt
     1681 aataccgaag gaaacctgta gctgggtctg ggagtagaga ttattaagca ccacctcgcc
     1741 caccgcatcg cgtttcactt caatcacgat gcgcatcccg tctttgtcgg attcgtcacg
     1801 cagcgcgctg atgccttcca cgcgtttatc tttcaccagc tcggcgattt tctcgatcag
     1861 gcgcgctttg ttcacctgat agggaatttc atggacgatg atggtttcac ggcccgtttt
     1921 cgcgtcagct tcaacttccg cgcgggcgcg aatgtacact ttgccacgac cggtacggta
     1981 ggcttcttcg ataccacgac gaccgttgat gatcgcggcg gtcgggaagt ccggacccgg
     2041 aatatgttcc atcagccctt caatgctgat gtcttcgttg tcgatatacg ccaggcagcc
     2101 gttaatcact tccgtcaggt tgtgcggcgg gatattcgtc gccataccta ctgcgatacc
     2161 ggaagaaccg ttcaccagca gattcggaat tttggtcggc atgacgtccg gaattttttc
     2221 cgtaccgtca tagttatcca cgaaatccac cgtctctttt tcgagatcgg ccatcagtcc
     2281 gtgggcgatt ttcgccagac ggatctccgt ataacgcatt gccgccgcgg agtcgccgtc
     2341 aatagaaccg aagttaccct gaccatccac cagcatgtaa cgcagcgaga atggctgcgc
     2401 catacgaacg atggtgtcat acactgcgga atcgccgtgg ggatggtatt taccgattac
     2461 gtcaccaacg acacgggcag attttttata ggctttgttc cagtcattgc ccaatacgtt
     2521 catggcgtaa agtacgcgac ggtgtaccgg cttcaggcca tctcggacat ccggcagcgc
     2581 acggccaaca atgacagaca tcgcataatc cagataggag ctcttcagct cttcctcaat
     2641 gttgaccggt gtaatttctc tcgcaaggtc gctcatctaa ccgctatccc tctactgtat
     2701 cccggattca aaggtcgcaa attataacac attcgcccac gtactggtaa acggaatgca
     2761 gccagacaat gctttattcg ggtgccacat gctctcttca tttataagcg tggtctcggc
     2821 gtttatcggc gatcagcttc agaggcgaca cagaggagat ctgggcctgg ccaggaatag
     2881 gctggaaaat caatacctcc cgtgtatacc cgtcatactt caagtttcat gtgcgttggc
     2941 ggcaagttac tcggcccatc cctgggcctc gccccgtcgg ggttagcgca agcgctgttc
     3001 aagacggtta accattttat cctgcaactc gaattattta ggggatatgc cgggaggcat
     3061 aaaccataat cagtatcacc agatgctatt taatcacata ggccaggtat tctttcacta
     3121 cctcatcgtt taattcctga cccaatccgg gctgttccgg cgcgacataa tagccatttt
     3181 ccggctgata atcgtgggta caaagttccc gaatagatgc tttcatcgca ttggtatgat
     3241 gttcatgaat aataaagttg ggaattgccg tttccatatg cagcgcggct accgtggaaa
     3301 caggaccgcc gcaaacatgc acctgtacag tggtgtcata aatattagca tagtcacaga
     3361 ttttctttcc ttcggtaatt ccgccgcaga gacacaaatc aggttgcgct acggcaatag
     3421 actgtttctc cagtaattcc ctgtatcccc atcttgtgta ggaacgctcg ccagtggcga
     3481 ttggaatcgt tgttgaacgg gaaactttct gcatattatc agaatttaat ggatggctcg
     3541 gttcttcata aagaaagata cgatactttt ctatcgcctt cgcaaattga atagctgagt
     3601 ttgtaccgag aagagaatgg atttctacga taatatcagc atcatccccc attgcttcac
     3661 gcatagcggc aattcgcgct tcccccattt ttaattgatc ggccagtaac aatcctgaat
     3721 agttacgatt tctattctga aaaacacagt catcgccatt acgatcgatt tcgagtggat
     3781 ccactttaat cgcatcatat ccatcgtcaa gagccgcacg cgccgcctca gcatattcct
     3841 caggtgtcac taatatctgg cgtttatccc cccaaccaaa ttgtaactga ctagcatagg
     3901 ttcttaattt ttcattagtt ttcccgccaa ggagctgata aacaggtaca cctaaatatt
     3961 tacctttgat atcccaaaga gcaatatcaa tagcgctcat tccggcataa aaaacgttcc
     4021 cgcctcccat tccccaaaaa gtctttctga aaaagaactc ccaaattttt tcgatattta
     4081 atggatcttc acccacaatc aatgacgcca gatctctgat gatccctacg ccagctttag
     4141 cgcctgcgcc ataggccagt cctacttcgc caataccact taatcctgag tcggtattca
     4201 cccggataag tactggatta taggatgaca tcgtttgatc tctttttttt aattcacagt
     4261 caaaaacttc aatagacgta attttcataa tttctccatt tatcaggttc gtgatacaac
     4321 atttgtttgt tggctttttt cttttttcac atcaattttc attaacgcca aaacggctac
     4381 cgcagcgaag caaagtattg cctctacaat aaatattcct gtcgcaccat aatgagtaga
     4441 aacgaatccc agtgacttat taatcaggaa tccgccaaga cttgaacatg agttaataaa
     4501 cgcaatgctg atagccaacc ctgacggcga caataatgca gaaggcagcg cccagtaagg
     4561 tccgtaatag ctgaggatcc caacaccata gaacgttagc cccagcattc tcagcgacat
     4621 tgaggggaca agagcaatca tcagaaaacc acagcctgcc agaaacatgg gtaatgcagc
     4681 atgccatttt cgttcattct ttttatcgga atgccagccc caccagggca tgctgaacat
     4741 agcgaaaata aacggaatac tcatgattaa accaacgtca gtatccgtaa aatcagctga
     4801 aaatcccttc accaaccccg gcaaccagta gtttgccgcc agagcagccg cctgaatcaa
     4861 catgtaggcg aaagaaagct gaagcaaaac tggatttttg attacggaaa gaaaggatga
     4921 gttggtattt ttatttaatg cagctgcggt ttcattgtca gtgcgtaatt tattaactaa
     4981 ggccgatatc tgctgtggcg taagccattt agccttttct ggactgtcag gcagtaaata
     5041 aaatgtcagg atgccaagga atacggtagg gataccttca atagcaaaaa gccagcgcca
     5101 gccttcataa tccggggtat tcaaatgctc gatgatccaa ccagacatcg gtgcagccaa
     5161 taccgatgca acagcaatag ataacatgaa gaaactattg acttttccgc gttcacgagc
     5221 cgggaaccaa catgcaagat aataaaccat gcccgggaaa aagccagctt caaatacccc
     5281 caaaaaaatg cgagccagca aaatatgttg agtatcttta gcaaaaaaaa tcagccctgt
     5341 taccgctccc cagccgataa taatggaact aattcatttt cttgcgccaa gcttttgcaa
     5401 gccaatgcta ctcggaattt gaaagattaa atatgatatg aagaatatag aagaaatatt
     5461 agcgaaatcc tcaggcgtaa taccgagaga ttcattcatg cgtaatgcag caaacccaat
     5521 attgacacga tccatatagt taaaaaagta aagaataaag gccaaaggaa tgattttcct
     5581 ttttacaata cgaattgcat cgtataaatt ttcttgtgga ctactcattt tgcatcacct
     5641 tttatgattc aatgaataag ggtattgacc ggaatcgatg ttacgtaaaa aacaatacaa
     5701 ttcaaaagct aatgtgtcat atctgatata tcagcaagca aacttaatga aatatacaat
     5761 aacaacaata aagtatgtaa attttcttat atctgatata ttagatccgt taattttgaa
     5821 taaattaatt acaatggagc cgggtttaac catggaggag aagaaaatga aaaatagatt
     5881 aaagcgtgat tttagtcaca tatcaattga aatacccaaa tccatcaccc aggtgattaa
     5941 agagaaaata agggagatga ttatccatgg cgatttcgat cttgggcaag cgatcagtga
     6001 aaatgaacta tcaaatattc tgatgataag taaaacacca attcgtgaag cttttatttg
     6061 gctgagctat aatgaaaacc tggtcaacat cattccccgc agtgggacat ttgttttttc
     6121 tgtcaccgac gaggatatca atgatctcat caaaatgagg gttatccttg aacagggcgc
     6181 aattcgtgaa gcgatggaga aaaatgctaa caatgtcata gtcgaattaa gcaatatttt
     6241 atcgaagtca gcaaaaatta atgcagagcg agatacgcaa gcttacctca aactggatca
     6301 tgattttcat tatgtttttg tgaaatatgc cgataataaa tacatttcac aagcacacct
     6361 gttgatctct gcacgtttat tggcaattcg ctacagactg gattttaccg ctgaatatat
     6421 caccagctct aaccgtggac atgccactat tttagatatg ttaaaaaaca acaacgtcga
     6481 gggcgtctgt aattttatca cgcaccacat cggtagcggt tttacagaac gcgcaagaaa
     6541 acttcttgcg ctgaaagcgt aataaagacg gcagtagata taacgcagcg actttgcacc
     6601 tgctatactg ccccgataga tcaatagcgg aatctcatgt actcatgaac actgaaaaac
     6661 cgtcggtagc tcacaacgtt gaccataatg aaatcgccaa attcgaagcc gtcgcgtcgc
     6721 gctggtggga tctgaagggc gaattcaagc cattgcatcg catcaacccc ctacgccttg
     6781 gctacattac tgagcgctca ggcggcctgt tcggtaaaaa ggtgctcgac gtcggctgtg
     6841 gcggcggtat tctggcggag agcatggcgc gcgaaggcgc taccgttacc gggctggata
     6901 tgggctttga gcctttgcag gtcgccaaac tgcatgcgct ggaaagcggc attgaggtag
     6961 agtacgtgca ggagacggtt gaggaacatg cggcaaaaca cgcccagcaa tacgacgtcg
     7021 tcacctgtat ggaaatgctg gagcacgttc ccgatccgca atcggtcgtc cacgcctgcg
     7081 cccaactggt taaacccggc ggcgaggtgt tcttctcaac gttgaaccgc aatgggaaat
     7141 cctggctgat ggcggtcgtc ggcgctgagt atattctgcg catggtgcca aaaggcacgc
     7201 acgacgtgaa gaaattcatt aagcctgctg aactgttaag ctgggtagat gaaaccgtcc
     7261 tgaaagagca acatatcacc gggctgcact acaacccgat aaccaatact ttcaaactcg
     7321 gtcccggagt agacgttaac tacatgttgc atacccgcgc taaaaaagcc tgacatcaaa
     7381 gaattttcct ataagggttg cgttagatca tcgggcgcaa cctttctctt cgatgaaaaa
     7441 atcagcattc gatcaaattt tgattttttt atgaattgtt gacatcctct ccaggcctta
     7501 tcagacgcgc atttagcgat tcttactctt ttacaaccgc aatttaacgc caaaatcaac
     7561 tcttgtactc aaaagaatcc ctactagaat actcaccata tagcgtttca cttatcgatt
     7621 accccctata tatagtattt atccacagag ttagtcacaa cgtggcgttg tggataagcg
     7681 ggggggatat ttttctttca cggacaggta aacaggtaga aaactacatg aatcagagtc
     7741 tgctggtgac aaagcgtgac ggccgtactg agcgcatcaa tctcgacaaa attcatcgcg
     7801 tgcttgattg ggcggcagaa ggactgaata acgtatcggt ttctcaggtc gagctacgct
     7861 cgcatattca gttttatgat gggattaaga cctccgatat ccatgaaact atcattaagg
     7921 ccgccgcaga cctgatctct cgcgatgcgc cggattatca atacctggct gcgcgtctgg
     7981 cgattttcca cctgcgtaag aaagccttcg gccagtttga gccgcccgca ctttaccacc
     8041 atgtggtaaa aatggttgag cttggcaaat acgacaatca tctgctggaa gactacacgg
     8101 aagaagagtt caagcagatg gattcgttta tcgttcacga tcgcgatatg accttctcct
     8161 acgctgccgt taagcagctg gaagggaaat atctggtgca aaaccgcgtg accggcgaaa
     8221 tctatgaaag cgcgcagttc ctctacattc tggtagtggc ctgcctgttc tctaactatc
     8281 cgcgtgaaac gcgtcttgac tatgtaaaac gtttttacga tgcggtctct acgttcaaaa
     8341 tctcgctgcc gacgcccatc atgtccggcg tgcgtacccc gacccgtcag ttcagctcct
     8401 gcgtactgat cgagtgtggc gacagtctgg attccatcaa cgccacctcc agcgcgattg
     8461 tgaaatacgt ttcccagcgc gccggtatcg gcatcaacgc tggccgcatt cgtgcgctgg
     8521 gtagcccgat tcgtggcggc gaggcgttcc acaccggctg tattccgttc tacaagcact
     8581 tccagacggc ggtgaaatcc tgctcgcagg gcggcgtgcg cggcggcgcg gcgacactgt
     8641 tctacccgat gtggcatctg gaagtggaaa gcctgctggt gctgaaaaac aaccgtggcg
     8701 tggaaggcaa ccgcgtacgt cacatggact acggcataca gatcaacaaa ctgatgtaca
     8761 cccgcctgct gaagggcggc gacattacgc tgttcagtcc gtccgatgta cccgggctat
     8821 acgatgcatt cttcgccgac caggacgaat tcgaacgcct gtacgtgaag tatgaaaacg
     8881 acgacagcat ccgcaaacag cgtgtgaaag cggtcgaact gttctcgctg atgatgcagg
     8941 aacgcgcctc taccggtcgt atctatatcc agaacgttga ccactgcaat actcacagtc
     9001 cgttcgatcc ggttgtcgcc ccggtacgcc agtctaacct gtgtctggag attgccctgc
     9061 caaccaaacc gctgaacgat gtcaacgatg aaaacggcga aattgcgttg tgtacgctgt
     9121 ctgccttcaa cctgggtgcc attaagactc tggacgagct ggaagaactg gctattctgg
     9181 cagtacgcgc tttggatgct ctgctcgatt atcaggatta cccgattccg gctgccaaac
     9241 gcggcgcaat gggccgtcgt acgctgggca ttggcgtgat taacttcgcc tactggctgg
     9301 cgaaaaacgg taaacgttat tccgacggca gcgccaataa tctgacgcat aaaaccttcg
     9361 aagccattca gtactatctg cttaaagcgt ccaacgaact ggcgaaagag caaggcgcct
     9421 gcccatggtt caacgaaacc acctatgcaa aaggcatttt gccgatcgac acctacaaaa
     9481 aagatctgga tgcgatcgtc aacgaaccgc tgcactacga ctgggaacag ctgcgtgagt
     9541 cgatcaaaac ccacggtctg cgtaactcca cgctatcggc gctaatgccg tcggaaacgt
     9601 catcccagat ctccaacgcc accaacggta tcgaaccacc gcgcggctac gtcagcatca
     9661 aggcctcgaa agacggtatt ttgcgtcagg tcgtgccgga ttatgagcat ctgaaagacg
     9721 cttacgaact gttgtgggag atgccgaaca acgacggtta tctgcaactg gtgggtatca
     9781 tgcagaagtt tatcgaccag tcgatttccg ctaataccaa ctacgatccg tcacgtttcc
     9841 cgtcaggaaa agtgccgatg cagcaactgc tgaaagattt gctcaccgcg tataagtttg
     9901 gcgtgaaaac tctgtactat caaaataccc gcgacggcgc ggaagatgcg caggacgatt
     9961 tggcgccttc tattcaggac gatggctgcg aaagcggcgc ttgtaagatc tgatgaatag
    10021 tgccgggtag cgctatgctt acccggccta cgattgtacg gtttgtaggc cggataaggc
    10081 gcttgcgccg ccatccggcg ctcatcccat aaaggattca cttcaatggc atacactact
    10141 ttttcacaaa cgaaaaacga tcagctcaag gaacccatgt tctttggcca gccggtcaac
    10201 gttgcacgct atgaccagca gaaatatgac atcttcgaaa aactgatcga aaaacagctc
    10261 tctttcttct ggcgtccgga agaggtcgac gtctcccgcg atcgtatcga ctatcaggcg
    10321 ttgccggagc acgaaaaaca tatcttcatc agcaacctca aataccagac gctgctggat
    10381 tccattcagg gacgtagccc gaacgtcgcc ctgctgccgc tcatttccat cccggagctg
    10441 gagacgtggg tagagacctg ggcgttttct gagacgattc actcacgatc ctacacccac
    10501 attattcgta acatcgtcaa cgatccggcg gtcgtgtttg acgatatcgt gaccaatgag
    10561 caaattcaga agcgcgccga aggtatctcc gcctactacg acgaacttat tgagatgacc
    10621 agttactggc atctgctcgg tgaaggcacc cataccgtta atggcaaaac ggttgtcgtg
    10681 aatctgcgtg agctgaagaa aaaactgtat ctgtgcctga tgagcgtgaa cgcgctggaa
    10741 gccatccgct tctacgtcag cttcgcctgc tctttcgcat ttgccgagcg tgaactgatg
    10801 gaaggcaacg ccaaaattat ccgtctgatc gcccgtgacg aagcgctgca tctgaccggc
    10861 acgcaacata tgctgaacct gttgcgtagc ggcgtggacg acccggagat ggcggaaatc
    10921 gccgaagagt gtaaacagga atgctatgac ctgttcgtgc aggcggcgca gcaggaaaaa
    10981 gagtgggcgg actatctgtt ccgcgacggt tcgatgatcg gcctgaataa agatatcctg
    11041 tgtcaatacg ttgaatatat tacgaatatt cgtatgcagg cagtgggtct ggatctgccg
    11101 ttccagaccc gctccaaccc aatcccgtgg atcaatacct ggctggtgtc cgataacgtt
    11161 caggttgcgc cacaggaagt ggaagttagt tcttatctgg tcggacaaat cgattcggaa
    11221 gtcgataccg acgatctgag taatttccag ctctgatggg acgcgtcacg ctgcgtatca
    11281 ctggcacaca gctgctgtgc caggatgaac acccttctct gctggccgcg ctggaatcgc
    11341 ataacgttga ggtggagtat cagtgccgcg aaggatattg cggctcctgt cgtacccggc
    11401 tggttgccgg tcaggttgac tggattacgg aacctttagc gtttatccag ccgggagaga
    11461 ttttgccctg ctgctgcagg gcaaaaggcg atatcgaaat cgagatgtaa ctcagtgcaa
    11521 ctcgctggtg gaaaccaacg gcatcacgcc acgttttttc atctgcacgg catacagtgc
    11581 gccagcgagt accaccagca ccgcgccagc gacataaatc atacgatagc caaccgactc
    11641 aaccatcatt cccatgataa aggcgccaat cgccattccg gcgtccatcg cgttaaagaa
    11701 cagtgaattc gccacaccga ttttatgcgg ttcaaccgag ctgataattt gcgtctggaa
    11761 aaccggcgtg accgaaccgt agccgatacc gatgagaccg ccggaaataa tcatcatgat
    11821 gctgccattg gtgtagccca gcgccaccag accgatggta aaagccaaca gacatggata
    11881 aacaacatat ttcggccctt ttttatcaca aatattcccg gtgaaggtac ggcatatcat
    11941 cagtaaaatc gcgtagcaca gcaggaaatt actggccgcc gccattaaat ccagctcacg
    12001 agcatacagc gccaggaaag ccgacacgcc ggcataggag aaagtcataa aaaaggtgac
    12061 cagcgcaaaa ggcaaggcgg cgcggtcaaa catcgcggaa aaacccagat tcggtttcga
    12121 accatcggca tgacgaatta ccggaggaac cgtcacaatc agggaaagca caatctctaa
    12181 cgccgctaca gcggaacaaa gccagaatgc ggcagtgaac gcgtcccagc gggccatatt
    12241 caaaccaatc cacggtccta cgaccatcgc caggcccatc gctaaagaga aaaagctgat
    12301 gccctctcca cgtcgggagg ccggaattaa ccgcgctgaa atagttcctt ttaccgtggt
    12361 aataacacca aacgtaatcc catgaagtac gcggataaag agcagcgact cgatagaatg
    12421 gcaaactgga tacagcgcgg taatcaccaa aaaagccaga gaagagagca ccagaatctt
    12481 tttattcgaa tattttccca cccactgccc ggcaaacggc cgaataacaa ttgccgcggc
    12541 caggaaacat gtcactagca atcctgcctt atctgcagaa gcatgcaggc ggtcagcgat
    12601 ataaatgggt aataaagtta gcagtacata aaaaacaaaa aagataataa aacttactat
    12661 ggtgattgcc caaaaatcct tcgtccataa tttttctttc attcttaacg acccattcag
    12721 atggcgcacg caggcaacgc tcagctcaac tgaacaccta tcaggtgcgt caaaatgtga
    12781 tgtattcgat agaatcgcag tataaacaag tgcactttat tagaaaaatt aatcgtttta
    12841 attatattga ttaggtttta ctaatgacgc taacccaaat ccatgccctg cttgccgtac
    12901 tggagtacgg cggatttacc gaggccagca aacggctata catgacgcaa tccgccgtca
    12961 gccaggccat ctccgcgctt gaggaggagc tcggcgttga catattgatt cgtgagcgtc
    13021 gtaaagagat cgagcttacc gccgccggta gccgcatcgt caggcactta cgcgcgatcc
    13081 agcgcgacgt caacgcggta aaagagattg tcgaacaaga aaaaaagaac ccggcccgta
    13141 cgctacggat tggctgtttt cccagcgcct gcgcctgcat tttacccggc gtcattcgct
    13201 attttgaaag ccatcatcca aatgtaaaaa ttatccccta tgaagagaac agtacggcta
    13261 ttattgattc gctgcaggac ggaagtattg atgccggttt cgttcctttt ccggtcaacg
    13321 gtatgtattg cgtccccatt taccgggata aattcaccgt agtggtgcct gaaaatcatc
    13381 ccctggcggc caatagtaca gtaacggtcg aagaactgat ggacgaacca cttattgtca
    13441 gtaaaggtcg ttatgaatta agtattatgg cgttgtttaa agaaaagggt attgaaccga
    13501 tatttaaata tgaatttaac catcccgata ctgcgctgaa ttttattcgc cagggattag
    13561 gtatcgcctt attgccagaa ttaaccttaa aagccacgac aggaaaatta tgctccgtgg
    13621 cgctggaacc caccttttat cgacaaattt cactgttagc aaaagaaccg ccggtagaag
    13681 gaagcccgct atttttatta caaaaatgta tggaaacact gaccgatgag ggtttgctat
    13741 aaaacaacac cgcctgatga cattgcgttt atcagactta cgctggcaaa cgttgcgcca
    13801 ggccggatga ggcgtttatg tcctcatccg gcgcttcact tctactatgg cataccttta
    13861 gtcatttttt tgcagaaaca tgaccgcctt atccgggaag tcggtgaaca gcccgtcgac
    13921 gcccgccttg ttatacagga tatcgtataa ctgattgacg tctgtggcat agtccggcaa
    13981 ttgatcggca cgcacagtgt aaggatgcac taccatctta ttctgatgcg cgtcctgcac
    14041 cattccagtc agcttgatat tccctttcgt cgaaccttcc gcgaccaaca tgtggtaatc
    14101 cggaccaata ccgtccgcat attccgccac ctgcttcata gcgcccggct taaacatcca
    14161 gtcgtagttg taatttaccc aacgaccgtc cggctgtttc tgctgggttt cattccagtc
    14221 ggtatacgca ataagttgaa ccagattgag atccatcccc attttgggtt ccagttcatt
    14281 cttaatacgt ttcagctcag cgacatcaaa acactgcaaa tagacattgt cctgcttgcc
    14341 gatgtaacca tacttcttca gcacttccag cgttttcgcg gcaatatctt tcccttcctg
    14401 atgatggaac cacggtgctt taatttccgg ataaataccg atatttttac cggtagagtg
    14461 atttaatccc tgaacgaatt caatttcctc ttcaaaggta tgaatgcgga aatcagattt
    14521 tcccatcggg aaacggcccg gataagtttg tacttttttg ccgttttcaa tatcaaaccc
    14581 ttcggtaaac ttcagggatt taatttcatc cagcgtaaaa tcgatagcgt aatagcgccc
    14641 atctttacgc gcccggtccg gaaaacgatc agcgacgtca gtcacccggt caaggtagtg
    14701 gtcatggagg acgaccagat ggtcgtcctt tgtcatcact aaatcctgtt ccagataatc
    14761 tgccccttgc gcatacgcca tcgctttcgc cggtagcgta tgctccggca gataaccgct
    14821 ggcgccacgg tgggcgatga cgactttttc agccgccacg gcgccgcttc cgatggtcat
    14881 tcctgccaac atcaacgcca cgctaaggtt tttcagtgtg gttttcatgt tattagcctc
    14941 cgttgcgttt taactgcagc tcatcatgat ggcgtttttc gccaatcatc acgaccacca
    15001 gcaggattac cgccagaatg ctaccgccaa tcatcaccat aaagccgcca tcccaaccga
    15061 agaagtcaac ggtataaccc acaatggcgc ttgcagcgac agaaccgccc aggtaaccaa
    15121 acagaccggt aaagcccgcc gccgtacccg ccgctttttt cggcgccagc tccagcgcgt
    15181 gcagaccgat caacattacc gggccgtaga tcaggaagcc gatgataatc atacaagcca
    15241 tatcaacgtt cgggttgcct gccgggttca tccagtaaac gatggtcgcg atagtgacca
    15301 gggtcataaa gaatacgccc gacgcgccac ggttgccgcg gaagacttta tccgacatcc
    15361 agccacacag cagcgtgcct ggaatacccg cgtattcata gaggaagtag gcccaggagg
    15421 atttatcgag tgcgaaatgc ttcacttctt tcaggtaggt cggtgaccag tcgaggatac
    15481 cgtagcgcag caggtagacg aacacgttgg cgatagcgat ataccacagt aatttgttcg
    15541 gcagtacgta ctgcatgaag atctgcttcg cagtcagctc ttcttccgct ttttcgttgt
    15601 agtcatccgg atagtcgttt ttatactctt cgataggcgg cagaccgcag gattgcggcg
    15661 tatcgcgcat cattgcgaaa gcgaacagtg ccaccacaat cgcgccaaag gctggcatat
    15721 agagcgccgc tttccagtcg ttaaaccacg ccatccccag caggaacagc agtggcggga
    15781 tcccgccgcc gacgttatgc gcacagttcc agaccgacac aatgccgccg cgctctttct
    15841 gcgaccacca gtgaaccatc gtacgtccgc acgacggcca ccccatcccc tggaaccagc
    15901 cgcaaaggaa caacagcaca aacatcacgg cgatgctgga tgtcgcccac ggcacaaagc
    15961 ccataaacaa catgactgct gcggccagaa tcaaccctgc cggcagaaaa acgcgcggat
    16021 tcgagcgatc ggacaccgaa cccattataa atttcgaaaa accataagcg atagaaatcc
    16081 cggacagcgc aaagcccaga tcgccgcgtg aaaaaccctg ttctaccagg tagggcatcg
    16141 cgagggcaaa gttcttgcgc accagataat acgcggcata gccaaagaat atccccagga
    16201 aaatctgcca gcgtaatcgg cgataggtcg gatcaatctc cgccgctggc aagcgcgctt
    16261 tatgaagcgc tggtttaaaa atactcaaca tattgtagcc tccgtagccc gtattttatt
    16321 tagaggtaaa caccgcagtt cgttcaaaca accccgctgc tcccagtgtg gccgcgatgt
    16381 taagtaaaga tacgtcacgt taatgtgaat tacagcacat attgttacag ttttatgact
    16441 aatgttcaga aaggcgcgcg aaatcaaaca ttccatatga tttgtatggc taaatgataa
    16501 aaaacgaact gtaaggaaaa acaatgaaaa ctcgcgactc gcaagcaagt gacgtgatta
    16561 tcattggcgg tggagcaaca ggcgcaggga tcgcccgcga ctgcgcgctg cgcggtttac
    16621 gtgtcattct ggtggagcgg catgatatag cgaccggcgc gaccgggcgt aaccacgggc
    16681 tgctgcacag cggcgctcgt tatgcggtta ccgacgcgga atccgcgcgc gagtgcatta
    16741 gtgaaaacca gattttaaaa cggatcgccc gccattgcgt cgaaccgacg gatggtctgt
    16801 ttattacgtt gccggaagat ggtcttgcgt ttcaggccac ctttattcgc gcctgtgaag
    16861 cggcaggcat tcgcgctgaa gccatcgatc cgcagcaggc tcgcatcatc gaaccttccg
    16921 ttaaccctgc gctcatcggt gcggtaaaag tgccggatgg caccgtagac cctttccgcc
    16981 tgaccgccgc caatatgctg gatgccagag aacatggcgc aatcgtgtta acggcgcatg
    17041 aagtgaccgg gctcattcgt gaaggcgcaa cggtctgcgg cgtccatgtg cgtaaccatc
    17101 tcactggcga aacccagacg cttcacgcgc cggtggtggt caatgcggct ggtatctggg
    17161 ggcaacggat cgccgaatac gccgacctga gtattcgcat gttcccggcg aaaggctcgc
    17221 tgttgatcat ggaccatcgg atcaaccagc atgtcattaa ccgctgccgg aaaccatcgg
    17281 atgccgacat tctggtacct agcgatacga tttcactgat cggcaccacc tctacccata
    17341 ttgattacaa tgagatagac agcaaccgcg tcaccgcaga tgaagtcgat atcctgctgc
    17401 gtgaagggga aaaactggcc cctgtcatgg cgaagacacg tattctgcgc gcgtattccg
    17461 gcgtccgccc gctggtggcc agcgatgacg atcccagcgg tcgtaacgtc agccgcggta
    17521 ttgtgttgtt cgaccacgcc gaacgcgacg ggcttgatgg cttcattact attaccggcg
    17581 ggaagctaat gacttatcgc ctgatggcgg aatgggcgac cgacgccgtg tgccgcaagt
    17641 tgggcaatac tcgcccctgc atcacggcgg atacgccgtt gcctggctca aaagagtcta
    17701 cggaacatac gctgaaacgc attatctcgc ttcccgcgcc gctacgcgga tcggcggttt
    17761 atcggcatgg cgatcgcacg ccggggtggc tgagtgaagg ccgccaacac cgtagcctgg
    17821 tctgtgaatg cgaggccgtc acggcggggg aagtgcagta tgccgtcgaa aacttaaccg
    17881 tgaatagcct gctggatctg cgccgtc
//
LOCUS       DAGWFR010000075        17462 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.076, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000075 DAGWFR010000000
VERSION     DAGWFR010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 17462)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17462)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17462
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.076"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..292
                     /locus_tag="MOX77_002602"
     CDS             <1..292
                     /locus_tag="MOX77_002602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="esterase family protein"
                     /protein_id="HCA3358094.1"
                     /translation="HSPSMWWTPDNRNRPPHFSAEERSWVSEHVLSAPSPAVRTHLCV
                     GSLEGSTVPQVKQLHEKLRAAGVESHCCVYTGGHDYAWWRGALIDGLRLLPR"
     gene            324..1241
                     /locus_tag="MOX77_002603"
     CDS             324..1241
                     /locus_tag="MOX77_002603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HCA3358095.1"
                     /translation="MYGRQYHNKCYRVALFLVSFCFSALSYAQPDMQPLGPNMADKGS
                     GYYHFRVNDFQSADGARHYRVWTAIPNKAAPPSGYPVLYMLDGNAVMDRLPETLLKQL
                     ADHSPPVIVAIGYQTNLPFDLNGRAYDYTPAPGIDRDDSENNPRFHRKTGGGPAFRQL
                     LERHIAPQVEQGITINPERRGIWGHSYGGLFVLDSWLSSSFFHIYYSASPSLSRDNFA
                     LLNRLTAVKPSPFCHKKLIIMEGSASNGDSRQRQMAELLQKVQETVRTLENNGVNAAL
                     QHYPGLGHGPMFNASFRSALLGISREPAS"
     gene            complement(1301..3481)
                     /locus_tag="MOX77_002604"
     CDS             complement(1301..3481)
                     /locus_tag="MOX77_002604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461704.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HCA3358096.1"
                     /translation="MGMRVKKFIWLITVVSTGINSPLSAAESTDDNGETIVVESTAEQ
                     VLKQQPGVSIITRDDIQKNPPVNDLADIIRKMPGVNLTSNSASGTRGNNRQIDIRGMG
                     PENTLVLIDGVPVTSRNSVRYSWRGERDTRGDTNWVPPEMVERIEMIRGPAAARYGSG
                     AAGGVVNIITKRPTNDWHGSLSLYTNYPESSKEGDTRRGNFSLSGPLAGDTLTMRLYG
                     NLNRTDADSWDINSSAGTKNAAGREGVTNKDINSVFSWKMTPQQILDFEAGYSRQGNI
                     YAGDTQNSNSNAVTKSLAQSGRETNRLYRQNYGLTHNGIWGWGQSRLGFYYEKTDNTR
                     MNEGLSGGGEGRITNDQTFTTNRLTSYRTSGEVNVPVIWLFEQTLTVGAEWNRDELND
                     PSSTSLTVKDSNIAGIPGSAANRSSKNKSEISALYVEDNIEPMAGTNIIPGLRFDYLS
                     ESGSNFSPSLNLSQELGEFVKVKAGIARAFKAPNLYQTSEGYLLYSKGNGCPKDITSG
                     GCYLVGNKNLDPEISINKEIGLEFTVDDYHASVTYFRNDYQNKIVAGDQIIGRSASGA
                     YVLQWQNGGKALIEGIEASMAVPLMPDRLNWNTNATYMITSEQKDTGNPLSIIPKYTV
                     NTFLDWTITNALSANVNWTLYGKQKPRTHAESRSEETKGLSGKALGAYSLVGANVNYD
                     INKNLRLNVGISNIFDKQIYRSAEGANTYNEPGRAYYAGVTASF"
     gene            complement(3995..4328)
                     /locus_tag="MOX77_002605"
                     /pseudo
     CDS             complement(3995..4328)
                     /locus_tag="MOX77_002605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_449164.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(4503..5555)
                     /gene="pipB2"
                     /locus_tag="MOX77_002606"
     CDS             complement(4503..5555)
                     /gene="pipB2"
                     /locus_tag="MOX77_002606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-2 type III secretion system effector PipB2"
                     /protein_id="HCA3358097.1"
                     /translation="MQRSLDSLAGMATSAFGAGTSAAMRQATSPKTILQHIINFFTCG
                     GIRRRNETQYQELIETMAETLKSSMSDRGAPLPENIILDDVDGCRVEFNLPGENNEAG
                     QVIVRVSKGDNSETREIPLASFEKICRALLFRCEFSLPQDSVILTAQGGMNLKGAVLT
                     GANLTAENLCDADLSGADLEGAILFMADCDGANFKGANLSGASLGDSNLTNACLEDSI
                     MCGATLDRANLTGANLQHTSLLGCSMVECNCSGANMDHANVSGSTLIRADMSGATLKG
                     ATIMAAIMEGAVLTRANLQKASFTATNLDGADLSEANLRNTSFKDCTLTDLRTEDATM
                     STSTQTLFNVFYSENI"
     gene            6072..7001
                     /locus_tag="MOX77_002607"
     CDS             6072..7001
                     /locus_tag="MOX77_002607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VirK family antimicrobial peptide resistance
                     protein"
                     /protein_id="HCA3358098.1"
                     /translation="MTMQQSDMERYNPLLMLKEVMAQTPYRHKRWGERKFRYKFVLRC
                     LINPVTTIKYFNELCHLSQPRTLIIHRPLLPAKIQRPYLYTGLSIRCRAKAILEHYQF
                     VQSFPESKIKKILLSEEQILLAHLEGKNGALVDIYCGPCGYDREGELTLTLCFNDTPL
                     ARLSFSFIRHEGKQIALVAGLQGPSKHIGPQVIRNATKDCYGLFPKRMLYEAFATLMQ
                     ACNVDEIYAVSENNHVYRQLRYLFQKKKTFVASYSEFWESLNGVKKGALYHLPSQVMR
                     KAPESIPSKKRAEYRKRYHILDTIIQEVNSLSR"
     gene            7295..8191
                     /locus_tag="MOX77_002608"
     CDS             7295..8191
                     /locus_tag="MOX77_002608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antimicrobial resistance protein Mig-14"
                     /protein_id="HCA3358099.1"
                     /translation="MKIQEVKRILTRWQPSSFTLYREVFTQYGGSINMHPDIVDYFMK
                     RHNWHFKFFHYKEDDKIKGAYFICNDQNIGILTRRTFPLSSDEILIPMAPDLRCFLPD
                     RTNRLSALHQPQIRNAIWKLARKKQNCLVKETFSSKFEKTRRNEYQRFLKKGGSVKSV
                     ADCSSDELTHIFIELFRSRFGNTSSCYPADNLANFFSQLHHLLFGHILYIEGIPCAFD
                     IVLKSESQMNVYFDVSNGAIKNECRPLSPGSILMWLNISRARHYCQERQKKLLFSIGI
                     LKPEWEYKRMWSTPYFTGKSIC"
     gene            complement(8913..9818)
                     /locus_tag="MOX77_002609"
     CDS             complement(8913..9818)
                     /locus_tag="MOX77_002609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001574833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HoxN/HupN/NixA family nickel/cobalt transporter"
                     /protein_id="HCA3358100.1"
                     /translation="MLSAAILAYSFGLRHAVDADHIAAIDTVTRKLMQQGKTPLGVGA
                     FFSLGHSTIVVLACLAIVVTSMAFRDRIDVLHQYGSLIGTAVSAFFLLAMALLNLFIL
                     FNVWRQFRSVTRGESVGAHDEAIPGGLMTRIFQRTFRLVTSSWHMYFVGFLFGLGFDT
                     ATEVGLLGISASAANQGLSLWSMMIFPVLFTAGMALVDSLDNFVMVGAYGWAFSHPLR
                     KLYYNITITAASVIVALAIGGLEALGLIDDALQLSGTFWQTVSTLNDHMGNVGFWVVG
                     AFVLFWLLSLLNYRWRGYDKITLNT"
     gene            complement(10059..11474)
                     /locus_tag="MOX77_002610"
     CDS             complement(10059..11474)
                     /locus_tag="MOX77_002610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HCA3358101.1"
                     /translation="MKWVKPQSLYLQLLLFLGLPLILLWGLSAFNSYVNALQAATQAY
                     DRTLLSSARTVSERLVVRNNHLEVNVPWVVLDSFELNMNDRLYYKVVDPSGKVISGYD
                     DLPAMPPATPRTRLYPALAWFYHTEYRGEAIRVARLLQPVNEGGIIGMAEVYVAETLQ
                     SRRYLAGQLLFSSWISQGLLVLLTLVLVGWLLRRILRPMRQLSSLMVRREPGLLTPLP
                     ELLPWSETRLLIVAFNRYIDRLRGILSRQERFSADASHQLKTPLAVLKTQAAVALASQ
                     HPHHWYESLQAMSVTLDSTIQLTERLLQLSAVKHKEQGERRFSPVNLYDIVQSGCFTR
                     LAQARSKHIDLGYEGEQEAMWIEGDEVLLSELCGNLLDNALKYTPEQGIVTARLERDG
                     DAVTLVVEDSGPGIDNEHIHLALQPFHRLDNVGNVAGAGIGLALVNDIARLHRTHPHF
                     SRSEALGGLYVRIRFLSLVPQ"
     gene            complement(11461..12135)
                     /gene="tctD"
                     /locus_tag="MOX77_002611"
     CDS             complement(11461..12135)
                     /gene="tctD"
                     /locus_tag="MOX77_002611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator TctD"
                     /protein_id="HCA3358102.1"
                     /translation="MRLLLAEDNRELAHWLEKALVQNGFAVDCVFDGLAADHLLHSEM
                     YALMVLDINMPGMDGLEVVQRLRKRGQTLPVLLLTARSAVADRVKGLNVGADDYLPKP
                     FELEELDARLRALLRRSAGLVHEVQQLGELIFHDEGYFLLQGQPLALTPREQALLTVL
                     MYRRTRPVSRQQLFEQVFSLNDEVSPESIELYIHRLRKKLQGSDVRITTLRGLGYVLE
                     RGDEVG"
     gene            12290..13099
                     /locus_tag="MOX77_002612"
     CDS             12290..13099
                     /locus_tag="MOX77_002612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HCA3358103.1"
                     /translation="MKKQLLRTLTASILLMSTSVLAQEAPSRTECIAPAKPGGGSLLN
                     LSQGKFGRYGVDDVRWLASVGTDYGMIAVRADSPWKTLKDLMTAMEKDPNSVVIGAGA
                     SIGSQDWMKSALLAQKANVDPHKMRYVAFEGGGEPVTALMGNHVQVVSGDLSEMVPYL
                     GGDKIRVLAVFSENRLLGQLANVPTAKEQGYDLVWPIIRGFYVGPKVSDADYQWWVDT
                     FKKLQQTDEFKKQRDLRGLFEFDMTGQQLDDYVKKQVTDYREQAKAFGLAK"
     gene            13111..13545
                     /locus_tag="MOX77_002613"
     CDS             13111..13545
                     /locus_tag="MOX77_002613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461713.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HCA3358104.1"
                     /translation="MMSDRIFAGIWLLLCIAGLFIAWQIQSEYSYEPVGPRPFPLGII
                     GLMALCALALLLRHPDTVSWPRRHVLQKLITMIIILLMYAWGFEWLGFPIATALLTMV
                     IGMLFGATIPAAGISGAVLGILLWYAFDRLLDVTLPLGAWLS"
     gene            13556..15070
                     /locus_tag="MOX77_002614"
     CDS             13556..15070
                     /locus_tag="MOX77_002614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003846009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HCA3358105.1"
                     /translation="MDTWICLSQGFAVAMTPENLVIALIGCFVGTIVGLLPGLGPING
                     VAILLPLAFALHLPAESALILLATVYIGCEYGGRISSILLNVPGDAAAIMTALDGYPM
                     AQQGKGGVALSISAVSSFFGSLIAIGGIILFAPLLAQWSLAFGPAEYFALMVFAIACL
                     GSMMAQNPLKSFLAALIGLGLATVGVDANTGVYRFTFDSVHLSDGVQFIVVVIGLFSV
                     SEILLMLEHTSSGQTMVRKTGRMLFNLKEGAQCIGTTLRSSVIGFFVGVLPGAGATIA
                     SAITYMTEKKLSGNSDSFGKGDIRGVAAPEAANNASACGSFIPMLTLGVPGSGTTAVM
                     MGALTLYNITPGPAMFTEQPDIVWGLIAALLIANVMLLIMNIPLIGLFTRMLTIPLWF
                     LVPAIAAVSAVGVYAVHSPTFDLVLMVALGVLGYILRKMHFPMSPLILGCVLGEMLEQ
                     NLRRALSISNGNMAILWQSGVAKALLIMAIIVIVVPPVLRLIRKHSRKPQVDAS"
     gene            15373..16350
                     /gene="csiD"
                     /locus_tag="MOX77_002615"
     CDS             15373..16350
                     /gene="csiD"
                     /locus_tag="MOX77_002615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417145.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation induced protein CsiD"
                     /protein_id="HCA3358106.1"
                     /translation="MNALTAVKANTDDLAQRHTGFILAPSAQSPRLLALTFTADTTRQ
                     FLHQVAQWPVQALEYKSFLRFKIGKILDDLCGNQLQPLLIKTLLNRAQGALLISAEGI
                     DDVAQAEEMVKLATAVAHLIGRSNYDAMSGQYYARFVVKNVDNSDSYLRQPHRVMELH
                     NDGTYVEEVTDYVLMMKIDEQNMEGGNSLLLHLDDWEHLESFFTHPLARRVMRWAAPP
                     SKNVSHDVWHPVFDVDQQGRPVMRYIDQFVQPKDFEEGVWLSELSDALETSQNILSVP
                     VPVGKFLLINNLFWLHGRDRFTPHPDLRRELMRQRGYFAYAASHYQTHQ"
     gene            16376..>17462
                     /gene="lhgO"
                     /locus_tag="MOX77_002616"
     CDS             16376..>17462
                     /gene="lhgO"
                     /locus_tag="MOX77_002616"
                     /EC_number="1.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-2-hydroxyglutarate oxidase"
                     /protein_id="HCA3358107.1"
                     /translation="MYDFVIIGGGIIGMSTAMQLIDVYPDARIALLEKESAPACHQTG
                     HNSGVIHAGVYYTPGSLKARFCLAGNQATKTFCDQNNIRYDTCGKMLVATSELEMARM
                     RALWERTAANGLEREWLNAAELREREPNIIGLGGIFVPSSGIVSYRDVATAMANRFQA
                     KGGEIIYHAEVSALTEHAAGVIIRTSQGREIETATLIGCAGLMADRLVKMLGVEPGFI
                     ICPFRGEYFRLAPRHNRIVNHLIYPIPDPAMPFLGVHLTRMIDGSVTVGPNAVLALKR
                     EGYRKRDVSFTDTLEIFRSAGIRRVLQNHLLSGLGEMKNSLCKSGYLRRVQKYCPSLT
                     VNDLQPWPAGVRAQAVSPDGKLIDDFLF"
BASE COUNT         4367 a         4540 c         4237 g         4318 t
ORIGIN      
        1 ccactccccc tcaatgtggt ggacgccgga caaccgcaat cgcccgcccc atttcagcgc
       61 agaagagcgc tcatgggtca gcgaacatgt gttatccgcg ccctcgccag ccgtacgtac
      121 gcatctgtgc gtgggatcgc tggaaggttc gacggtcccg caggtcaaac agttgcatga
      181 aaaattgcgc gccgccggtg ttgaaagcca ttgctgcgtg tacaccggcg gtcacgatta
      241 tgcctggtgg cgcggcgcgc tgattgacgg attacgtcta ctgccccgat aaaacttcac
      301 ctgccaaaaa ggaataacat ccgatgtatg gtcgccagta ccacaacaag tgctatcgcg
      361 tggcgctatt tttagtgagt ttttgtttta gcgcgctgag ttatgcgcag ccggatatgc
      421 agccattagg gccgaatatg gctgataaag gttcgggata ttaccatttt agggtcaatg
      481 actttcaatc tgccgatggc gcaagacatt accgggtatg gaccgctatt cccaataaag
      541 ccgccccgcc gtcgggttat cctgtcttat atatgctgga cggcaacgca gtgatggaca
      601 ggctgccgga gacgctgctc aaacaactgg cagaccactc gccgccggtg attgtggcga
      661 ttggctatca gactaacctg ccgtttgatc ttaacggcag agcttatgac tatacgccgg
      721 cgccgggaat cgatcgcgat gacagtgaaa ataacccgcg ttttcatcgt aagaccggcg
      781 gcgggccagc gttccgccag ctactggaga gacatatcgc gccgcaggtg gaacaaggaa
      841 taaccatcaa ccccgaacgg cgcgggatat ggggacattc ttatggcggc ctgttcgttt
      901 tggactcctg gctgtcgtca tccttctttc atatctatta cagcgccagc ccgtcactca
      961 gcagggataa ctttgccctg ttgaatcgcc ttacggcagt gaagccgtcg ccgttctgcc
     1021 ataaaaaact catcataatg gaaggttcag cgtcgaatgg ggatagcagg caacgccaga
     1081 tggccgagct cctgcaaaaa gttcaggaga ccgtgagaac gcttgagaac aacggcgtta
     1141 acgcggccct gcagcattac ccgggcctgg gccacgggcc catgtttaac gcctcttttc
     1201 gtagtgcatt gctgggtatc agtcgcgaac cggcaagcta agaaccacgc tgccattaac
     1261 ccgtcgccag aatatgcccg ccagcggcgg gcataaccca tcaaaacgag gccgtcacac
     1321 cggcataata agcccgaccc ggttcgttat aggtatttgc cccttcggcg gagcgataga
     1381 tctgtttatc gaagatattg ctgataccga cattaagacg caggttctta ttgatatcgt
     1441 agttaacgtt agcgccgacc agtgagtaag cccccagcgc tttcccggac aatcctttgg
     1501 tctcttcact acgcgactcc gcatgtgttc gcggtttttg cttgccgtat aacgtccagt
     1561 tgacgttagc ggagagcgcg ttggtgatag tccagtcgag gaaggtattc accgtatatt
     1621 tcgggattat cgataaggga ttaccggtat ctttttgctc agaagtgatc atataagtcg
     1681 cattggtatt ccagttcaga cggtccggca tcagcggaac agccatgctg gcttcaatac
     1741 cttcaatcag cgctttaccg ccgttctgcc actgcaatac ataagcgcca gatgcgcttc
     1801 tgccaataat ctgatcacct gcgacaatct tattctgata atcgttacgg aaatacgtta
     1861 cgcttgcgtg ataatcgtct acggtaaatt ccagcccaat ctctttattg atactaattt
     1921 caggatcgag gttcttatta ccaaccaggt aacagccgcc cgacgtaata tcttttggac
     1981 aaccgttgcc tttcgaatag agtaaatacc cctcactggt ttgatacaag ttcggtgcct
     2041 taaaggcccg ggcaataccg gctttcacct tgacgaattc acctaactcc tgggaaaggt
     2101 taagactggg actaaaatta ctcccggatt cgctcaaata gtcaaaacgc agacccggaa
     2161 taatattggt accggccatg ggttcgatat tatcttcaac gtacagcgca ctgatttccg
     2221 atttattttt actgctacgg ttagccgccg aaccgggaat cccggcgata ttgctatcct
     2281 taaccgtcag actggtagag gaaggatcgt tcagctcatc gcggttccac tccgcgccga
     2341 cggtgagcgt ttgctcaaat agccatatca ccgggacatt cacctcgccg ctggtgcgat
     2401 acgaggtcag gcggttagtg gtgaacgtct ggtcgttggt aatacgcccc tcgccgccgc
     2461 cggagagtcc ctcattcatg cgggtattat cggttttttc atagtagaac cccaggcggc
     2521 tttgccccca gccccagatg ccgttatgag ttagaccgta attctgccgg tacaggcgat
     2581 tggtctcccg cccggactgc gccagacttt tggtaaccgc gtttgaatta ctgttttgcg
     2641 tatcgccggc atagatattc ccctgccgac tgtatcccgc ttcaaaatca aggatttgct
     2701 gcggggtcat tttccatgag aagacgctat taatatcttt attggtgacc ccctcccgtc
     2761 cggcggcatt tttggtaccg gcggaggagt taatatccca gctgtcggca tcggttctgt
     2821 tgagattacc gtacaggcgc atcgtcaacg tatcaccagc caacgggccg ctaaggctaa
     2881 agttaccccg ccgggtgtca ccttctttgc tgctttccgg gtagttggta taaagcgaca
     2941 gcgagccatg ccagtcgtta gtggggcgtt tggtgatgat gttcaccacc ccgcctgcgg
     3001 caccggagcc atagcgcgcg gcggcgggcc cacggatcat ttcaatacgt tctaccatct
     3061 ccggcggcac ccagttcgta tcgccacggg tgtcgcgttc tccgcgccag ctatagcgaa
     3121 ccgaatttcg cgacgtcacc ggcacgccgt caatcagcac taaggtattt tccggcccca
     3181 taccacgaat atcaatttgt cggttatttc cgcgcgtccc cgaggcgcta ttgctggtaa
     3241 gattaacccc aggcatctta cgaataatat cggcaagatc gttaacggga ggattcttct
     3301 gaatatcgtc acgagtaata atcgaaacgc ccggctgttg ctttaatact tgctcggcag
     3361 tggattcaac cactatcgtt tcgccgttgt cgtctgtaga ttctgctgct gataatggac
     3421 tattaatccc tgtagaaacc acggttatta accagatgaa cttcttaact ctcataccca
     3481 ttccctaaat aatgtctaaa gtagcgctgt tgccctcaag ctcacatcct tgccaggtta
     3541 cggctatata gtaattatta tcatatgcta atgataataa ttatcattca attaagaaaa
     3601 aggcaatctt tcgaccgcaa aatctggtca taagaaaaca gaaacgggat tttgcaatat
     3661 gactctctgt ccgggctccg ctttgccaat aaatccggga agggtggcag aatgcgccta
     3721 ctgagcggag gttttacaaa acaggaatag ataaaataaa actatttttc aaagcgttaa
     3781 tgataataaa cacccaggta agatggtata gtgcggttca gagttcaccg gcgcttccct
     3841 gtcgacggca aaccgttctt acagtttgcc gtcagggtaa tggcgggatc ggatacgatt
     3901 gtagtcattc gatatatgac aatgaaagtg atgttggcgc caaaatacaa agcgcctggt
     3961 aataattatc aggcgctttg cagacagaaa accatcaaac atcggtttct cgttctccag
     4021 gatctactgg aaaatatggc aacccacagt tagtggattt tactgtcggg tcttgccagg
     4081 gatgttgtgt tacccccagg tcttttaaaa gacctcgtaa cagcactaac tcgctgggtg
     4141 tcattttttg ctttggttca ccctctttag gtggacgaat atcctcctga ctagtacatg
     4201 taacacaata accttttaac tctatccact taggcttagg ggggggcctt aggatcggga
     4261 ggcgtcgggc tggcaacgca cgaacaggca cttatacatc caggcataac gttttccttt
     4321 tcaaacaatt cgctttagtt ggaagttcta cttgagaaaa tagaaatggt tattcagata
     4381 tttttaccgg cgcatactcc tgtaataata aaagatactg taaataatta actctcagct
     4441 actattcagt agcagattgt tattcttaca ttgcttttat ttcagattta cgtcaaatag
     4501 ggctaaatat tttcactata aaatacgtta aaaagtgttt gtgtacttgt agacattgtg
     4561 gcgtcttcgg tacgcaaatc ggttagtgta caatctttaa aactggtatt tcttaaatta
     4621 gcctcagaca aatcagcccc gtccaggttc gtagcagtaa aactagcctt ttgcaggttt
     4681 gcccgagtta agacagcgcc ttccataata gcagccatta tagtagcacc ctttaatgtc
     4741 gcaccgctca tatcggcacg tataagggtt gagcctgaaa cattagcgtg atccatattc
     4801 gcaccggaac aattacattc taccatgcta cagcctaaca gacttgtgtg ttgtaaattg
     4861 gcgccagtaa gattagcgcg atcgagggta gcgccacaca taatactatc ttccagacag
     4921 gcgttcgtta agttactgtc gcctaatgat gctcccgata gatttgcgcc cttaaaattt
     4981 gcaccgtcac aatccgccat aaacagtatt gccccctcta aatctgcgcc gcttaagtct
     5041 gcgtcacata aattttctgc cgtcagattt gctccggtaa ggacagcgcc tttaagattc
     5101 atgcctccct gggcagttaa tattacagaa tcctgaggaa gagaaaattc gcatctgaat
     5161 agtaaagctc gacatatttt ttcaaaagag gcaagcggaa tttctcttgt ctcagaattg
     5221 tcgcctttac tgactcgtac aataacttgt ccagcttcgt tattctcacc aggaagatta
     5281 aattcgacac gacacccatc cacatcatcc aggatgatgt tttctggcaa cggagcacct
     5341 ctgtcagaca ttgaactttt caatgtttca gccatagtct ctatcaattc ctgatattgt
     5401 gtttcatttc tccgacgtat cccaccacag gtaaaaaagt taatgatatg ttgcagaatg
     5461 gttttgggcg aggtagcttg ccgcatagca gcagaagtcc ccgcgccaaa agcagatgta
     5521 gccataccag ccagactatc gagtgaacgc tgcatatatt ttctcccaga gagagcaaca
     5581 cagtacatga taaaatttat cattagattt gcatttagaa ataaggtgaa tacccccttt
     5641 gcgtctggtt acataatcac gcatcacgac gcgttgctgt ctgacttaca caataccagc
     5701 caaataaata tattggctta tactcgtcat acttcaagtt gcatgtgctg cggctgcgtt
     5761 ccctcacccc agtcacttac tttagtaagc tcctggggat tcgctcgctt gccgccttcc
     5821 tgcaactcga attatttaga gtataaacat tatttaaaat aataaacacg gcattcgttt
     5881 taatactacg ttcaggactc atcccactca ttagcagaaa atctattaaa aagcgcgttc
     5941 aggcgtttta ttgctgccat tgataaactg tttaacaacg tcgtctgtac aggccttctt
     6001 cgttgccttt acgtttaact caatcaggct accgtctcgg ttataagtct atcgagtagt
     6061 agggacgtag tatgacgatg cagcaaagtg atatggaaag atataatcca ttattaatgt
     6121 taaaagaagt catggcgcag acgccttatc gccataaacg ctggggagag cgtaagtttc
     6181 gctataaatt tgtattacgt tgccttatta accccgtaac gacaattaaa tacttcaatg
     6241 aattatgcca tctgtctcag cccagaacgc tgattattca tcgtccactg ttgccggcaa
     6301 aaatccagcg gccctatttg tataccggac ttagcatacg ttgccgggca aaggctattc
     6361 tggaacacta ccagttcgtt cagtcctttc cggaaagtaa aattaaaaag atccttctgt
     6421 ccgaggaaca aatcttactc gctcacctgg aaggaaaaaa cggtgctctg gtagatatct
     6481 actgcggtcc ctgtggctat gacagagaag gtgaactgac attaacgctg tgcttcaatg
     6541 atacgccgtt ggcacgttta tcattttcct ttatccgcca tgaagggaag caaatagcgc
     6601 tggttgccgg gttacagggg cccagtaaac atatcggccc acaagtcata cgtaacgcca
     6661 ccaaagattg ttacggtctc tttcctaaac ggatgctgta tgaagcattt gcgacattga
     6721 tgcaggcctg taatgtcgac gagatttacg cggtaagtga aaacaaccat gtttatcgtc
     6781 aactcaggta cttattccag aagaaaaaaa cttttgtggc cagctatagt gaattctggg
     6841 agtcgctaaa cggcgttaag aaaggtgcct tatatcatct gccatcacag gtgatgcgta
     6901 aagcgcctga aagtatcccc agcaaaaaac gcgcagagta tcggaagcgc tatcatattc
     6961 tggatacaat aatacaagag gttaacagcc tctcccggta gaactatttc atacgcggat
     7021 gtgcagatcc tgctaccgtt cagcggatct ctttgaaatc tgtatcgcta ctggatggtt
     7081 aaatacagaa tggcttgcga gtgaaaagcg cggcattaaa ccgtcgcttt cattcatgct
     7141 atgatcaaca tcttaatctt attcccttca ccataacgtc atcgattagc atgttaacca
     7201 ttaaatacaa gctaaacatt tgtcacattt ttatttggtt gagcaaaaaa ataatacaaa
     7261 atagaatttt cagtaagcta agtcaggagt tttagtgaaa atacaagaag ttaagcgtat
     7321 attaacccgc tggcagccgt cttcctttac cctataccgg gaggtgttta cgcaatacgg
     7381 cggtagtatc aatatgcacc cagatattgt ggattatttt atgaagcgcc ataactggca
     7441 ttttaaattc ttccactata aagaagatga taagattaaa ggcgcctact ttatctgtaa
     7501 tgatcagaat attggcatcc tgacgcgcag aaccttcccg ctatcttcag atgagatact
     7561 tattccgatg gcgccagatt tacgctgctt cttgcccgat cgtactaacc gactttcggc
     7621 gttgcatcag ccacaaatac gcaatgccat atggaaactc gccagaaaga aacaaaattg
     7681 tctggtcaaa gaaacgttct cttctaagtt tgaaaaaaca cgccgtaatg aatatcagcg
     7741 gtttcttaaa aaaggcggaa gtgtaaaaag cgttgctgat tgttcttctg atgaactgac
     7801 tcatattttt atcgagttat ttcggtctcg tttcggcaat acttcatcct gctatcccgc
     7861 tgataacctt gccaactttt ttagtcaact gcatcacctt ctgtttgggc atattcttta
     7921 tattgaaggg ataccctgtg catttgatat cgtactgaaa tctgaaagcc agatgaacgt
     7981 ctactttgac gtatctaatg gtgcaattaa aaatgaatgc aggccactca gtcccggcag
     8041 catactaatg tggctaaata ttagccgtgc cagacattac tgccaggaaa gacaaaaaaa
     8101 attgcttttc tccatcggca tactaaagcc tgaatgggaa tataagcgca tgtggtcgac
     8161 cccctatttt accgggaaat cgatttgcta aaaagaaagc ctggacgtaa atatgttttt
     8221 tacgcccagg tttttcataa accctgataa aatgataaaa aacgaaaatt taatcagaat
     8281 ttaaaaaata agttaaccac catataatca taatgacaat tactcgaaat tcacttacac
     8341 tatgctcggt tttatggaat tgattaacac ggtatgttac agataacgtg ctaaaaagcg
     8401 tgcagcggtt atacattttc atatgtgtgt gtcattaacc tggcgtcagg aacagatgat
     8461 gatgacaact accattttat ctcttctggc ctggcatacc gtcagtagat taaaggtgta
     8521 gccttgcttt atggcattac aaaaatgtgg gtgaggtcta tgctcaatgt atacgttatt
     8581 tgtaacaacg ctcttgtgca taaacaatac gttattgcca acagcactga acgggtacag
     8641 tggttcttgc tgacaacagg cttaaagatc gtcttaacac gggatacctg ataactggat
     8701 tatattatga cacatgcaga ctggctgatt cttgggtata caactgttat tattattttt
     8761 ggtattgtat gttatatcgg attgcttaaa ttgataacga aaggcaagca tgaaaaataa
     8821 cgcacttacc gggaagaata tactctcagg agataaaatg cttcggcaat gatatgacac
     8881 cactgccgaa atgctatttt tacagaaatc aatcaggtat tgagggtgat tttatcatag
     8941 ccgcgccagc gataattcaa caacgagagc agccagaata gcacaaaagc acccactacc
     9001 cagaagccca cattccccat atgatcgtta agcgtgctga cggtctgcca aaatgttccg
     9061 cttaactgta acgcatcatc aatcaacccc agcgcttcaa gcccgccaat cgccagcgcg
     9121 acaatgacgg atgcggcggt aatggttata ttataataaa gcttacgtaa tggatgcgag
     9181 aaagcccaac cgtaagcgcc gaccatgaca aagttatcca gggaatctac cagcgccatc
     9241 ccggcggtaa acagcacagg aaaaatcatc attgaccaga gagatagccc ctggttagct
     9301 gctgaagcgg aaatgcccag caacccaacc tcggttgcgg tatcaaatcc caagccaaac
     9361 agaaaaccga caaaatacat atgccaactg gaagtgacca aacgaaacgt acgctgaaat
     9421 atacgcgtca tcagcccgcc aggtatcgcc tcgtcatgcg cccccactga ctcgccgcgg
     9481 gtaaccgagc gaaattgccg ccagacgttg aacaaaataa acaggttgag cagggccatc
     9541 gccagcagaa aaaaagcgga aacagccgta ccaatcaacg aaccatattg atgcaaaaca
     9601 tcaatacgat cgcgaaatgc catcgacgtc acaacaatcg ccagacatgc cagaacgaca
     9661 atggtcgaat gacccaatga aaaaaacgcc cccacgccta aaggcgtttt accctgctgc
     9721 atcagtttac gggtgacggt atcgatggct gcgatatgat cggcatcaac cgcatgacgc
     9781 agcccaaagc tatacgccag tatggctgcg cttagcatga ctgcatggtg atgaaaaaca
     9841 cagaacgccc aaatctaggc caggatgtta accccgacaa gaaagacggt taatgctatt
     9901 ccccgtcgtt tagtatgatt attcatgccc ctgcacccac tatagtttta attaacgcta
     9961 cggtttgtag ggggaatgta tgatcatttg attaaaacgt cacacctcaa gatgcgactt
    10021 tttgtaaacg tgctttaccg ctgacacatt tgtgcgcatt actgcgggac aaggcttaaa
    10081 aagcgtatcc gaacgtataa ccctcccaac gcttcgctac gggaaaaatg gggatgagta
    10141 cggtgcaagc gtgcgatatc attgaccaaa gccagaccaa tgcccgcccc ggccacattt
    10201 cctacgttat cgagccggtg gaacggctgt agcgccagat ggatgtgttc attatcaatg
    10261 ccggggccgc tatcttcgac aaccagcgtc acggcatcgc catcccgttc aagccgcgcg
    10321 gtgacaatgc cttgctcagg cgtgtatttc agcgcattat ccagcaagtt tccgcacagc
    10381 tcgctaagca gtacctcatc cccctcgatc cacatcgctt cctgttcgcc ttcgtagccc
    10441 aggtcgatat gtttactgcg cgcctgcgcc aggcgggtaa agcagccgct ctgtacgata
    10501 tcgtacagat tcaccgggga aaaacgcctc tcgccctgct ctttatgctt taccgcagaa
    10561 agttgcaaca atctttccgt gagctgaatg gtgctatcca gcgttacgct catcgcctgc
    10621 agactttcgt accagtgatg agggtgctgg ctggctaacg ccaccgccgc ctgcgttttt
    10681 aacaccgcca gcggcgtttt taactggtga gaagcatcgg cgctaaagcg ttcctgccgg
    10741 gaaaggatgc cgcggagcct gtcaatgtag cgattaaacg ccacgattaa caagcgtgtt
    10801 tccgaccacg gcagcagttc cggcagcggc gttaacagac ccggttcgcg gcgtaccatt
    10861 aatgacgaaa gttgacgcat agggcgcagg atccggcgta ataaccagcc aaccagcacc
    10921 agggtcagca acaccagcag cccctgtgag atccaggaag agaacagcag ttggcccgcc
    10981 agataacgac gggactgcag cgtttctgcg acataaacct ccgccatgcc gataatgccg
    11041 ccttcgttga ccggctgtag caaacgcgct acgcggatcg cctcgccgcg atactcggta
    11101 tgatagaacc acgccagcgc cggataaagc cgggtacggg gcgtagcggg cggcatggca
    11161 ggcagatcgt cataaccgga aatgaccttc ccggaagggt cgacgacttt gtaatagagt
    11221 cgatcattca tattaagctc gaagctatcc agcaccaccc agggcacgtt aacttccaga
    11281 tggttattgc gcaccaccag ccgttccgat accgttcgcg ccgaggagag caacgtacga
    11341 tcataagcct gagtggcggc ctgtagcgca ttgacataac tgttaaacgc cgacagcccc
    11401 catagcagaa tcagcggcaa ccccaggaac agtaagagtt gcaggtacaa cgattgcggc
    11461 ttaacccact tcatcgccgc gctccagcac ataacccagg ccgcgcagcg tcgtaattcg
    11521 tacatcgctt ccctgaagtt ttttacgcag tcgatgaata taaagttcga tgctttcagg
    11581 gcttacctca tcgttcaggc tgaacacctg ttcaaaaagc tgctgacgcg agacaggccg
    11641 cgttcgtcgg tacatcaata cggttaagag cgcctgctca cgcggcgtca gcgctaacgg
    11701 ctgtccctgt aacagaaaat acccttcatc atgaaagatc aattcaccca gttgctgaac
    11761 ttcatgaacc agcccagcgc tgcgtcggag caaggcccgt aaacgggcat ccagctcttc
    11821 cagttcaaag ggtttcggca gatagtcatc cgcgccgacg ttgagacctt ttacgcgatc
    11881 cgccaccgcg cttcgcgccg tgagcagcaa aacgggcaag gtctgaccgc gtttacgcag
    11941 ccgttgcacc acctccagtc catccattcc cggcatattg atatccagca ccatcagcgc
    12001 atacatttca ctgtgcagaa gatggtcagc cgccaggccg tcaaatacgc agtccacggc
    12061 aaagccgttt tgcaccagcg ctttctccag ccagtgagcc agctcacggt tatcttccgc
    12121 caataagaga cgcatatcac atcctgtaaa gtttctgccg cattgaaagg gaattgaaag
    12181 gttattgttt taacaatcac gcaaccgaac tgctacatgt cggctcacat aatcacaaaa
    12241 atcttcttcc gaacctgaaa aatccggacg tccggcgtga ggataaaaaa tgaaaaaaca
    12301 attacttcgt acccttactg caagcatttt attaatgagt acctctgttc tggcacagga
    12361 ggcgccgtcg cgaacggaat gtatcgcgcc agccaaacct ggcggcggtt cgctgctcaa
    12421 cctgtcgcag gggaaatttg gtcgctacgg cgtggatgat gtgcgctggc tggcaagcgt
    12481 gggcactgat tacggcatga tcgccgtgcg tgcggattcc ccgtggaaga cgctgaaaga
    12541 tctgatgacg gcgatggaaa aagatcccaa cagcgtggtc atcggcgctg gcgcctctat
    12601 tggcagccag gactggatga agtcggcgtt gctggcgcaa aaggcgaacg tcgatccgca
    12661 caagatgcgc tacgttgcct ttgagggcgg cggcgagccg gtgacggcat taatgggcaa
    12721 ccatgttcag gttgtctccg gcgatctcag tgaaatggtg ccttatctgg gcggcgacaa
    12781 aatccgcgtc cttgccgtct tttcagaaaa tcgtctgctg ggccagcttg ccaatgtccc
    12841 taccgctaaa gaacagggct acgacctagt gtggccgatt attcgcggct tctatgtcgg
    12901 gcccaaagtc agcgatgccg attaccagtg gtgggtggat accttcaaga agctccagca
    12961 aaccgacgag tttaaaaagc agcgcgatct gcgcggcctg tttgagttcg acatgaccgg
    13021 ccagcagctc gatgactacg tgaaaaaaca ggttactgat taccgtgaac aggcgaaagc
    13081 cttcggactc gcgaaataat cgcggaggca atgatgagcg atcgtatctt tgcgggtatc
    13141 tggctgttgc tctgtatcgc cgggctattc atcgcctggc agatccaaag cgaatacagc
    13201 tatgaacccg tcggcccccg cccttttccg ctggggatta tcggcctgat ggcgctctgc
    13261 gcgctggcgc tgttattgcg ccatcccgac acggtgagct ggccgcgccg ccatgttctg
    13321 caaaagctaa ttaccatgat catcatcctg ttgatgtatg cctggggatt cgaatggctg
    13381 ggttttccca tcgccaccgc gcttctcacc atggttatcg ggatgctgtt cggcgccacg
    13441 attccggcgg cgggtatctc cggcgcggta ttaggcattc tgctgtggta tgcctttgac
    13501 cggctgcttg atgtcacctt acctctcggc gcctggctga gttaacggag caacgatgga
    13561 tacctggata tgtctttctc agggctttgc ggtggcaatg acgccggaaa acctggttat
    13621 cgcgttgatt ggctgcttcg tgggcacgat cgtcggtctg ctgccgggcc tgggaccgat
    13681 caacggcgtg gcaatcttac tgccgctggc ctttgcgttg catctgcctg cggagtcggc
    13741 gctaattctg ctggcgacgg tgtacattgg ctgtgagtat ggcggcagga tctcctccat
    13801 attgctcaac gtccccggcg atgcggcggc gatcatgacg gcgctggacg gttacccaat
    13861 ggcgcagcaa gggaaaggcg gcgtagcgct gtcgatttcc gcagtcagct catttttcgg
    13921 ttcattaatc gctatcggcg gcatcattct gttcgcccct ttactggcgc aatggtcgct
    13981 ggccttcggt ccggcggaat atttcgcctt aatggttttt gctatcgcct gtcttggcag
    14041 catgatggcg caaaacccgc ttaaatcatt tctggcagct ctgatcggtc ttggccttgc
    14101 gaccgtcggc gtggacgcca acaccggggt ttatcgcttt acctttgaca gcgttcatct
    14161 ttccgacggc gtacagttta tcgtcgtggt gatcggcctg ttctcggtat cagaaatact
    14221 tttaatgctg gaacatacca gcagcgggca aacaatggtc cgcaaaacgg gtcgaatgtt
    14281 gttcaacctg aaagaaggcg cgcagtgtat cggcaccacc ctgcgttctt cggtaatcgg
    14341 cttttttgtc ggcgtattgc ccggcgccgg ggcgaccatt gccagcgcca ttacctatat
    14401 gaccgagaaa aaactcagcg gcaacagcga tagcttcggc aaaggggata ttcgcggcgt
    14461 cgcggcgccg gaggcggcaa acaacgcctc tgcctgcggc tccttcatcc cgatgctgac
    14521 gctgggcgtt cccggttccg gcactacggc agtgatgatg ggggcgctga cgctgtataa
    14581 catcacgcca ggcccggcga tgttcaccga acagccggat atcgtctggg gactcatcgc
    14641 tgcgctgctg attgcgaacg tgatgctgct gatcatgaat atcccgttga tcggtctgtt
    14701 cacccgtatg ctcaccattc cgctgtggtt cctggtaccc gccatcgctg ccgtatcggc
    14761 ggtaggggta tatgcggtac acagccccac cttcgatctg gtgctgatgg tcgcgcttgg
    14821 cgtgttaggg tacattttac gtaaaatgca cttccccatg tcgccgctga tcctgggatg
    14881 cgtactgggg gaaatgctgg agcagaacct gcgtcgcgca ctctccatca gtaacggcaa
    14941 tatggcgatt ttgtggcaaa gcggcgttgc caaagccctg ctgatcatgg cgatcatagt
    15001 cattgtcgta ccgccagtgt tacgtctgat ccgtaaacac agccgtaaac cgcaggttga
    15061 cgccagttaa ttgactgctg aaatacgttg tacttgtccg gcctacgcgc tcatgtgcca
    15121 ggccgggcaa ccccgccagc atcactcttt ccataactcg ctcattttac accccttctt
    15181 gccgttgtca ggctcgtggc gccgttaacc tcacctttcg cattgttaaa tatttgttgt
    15241 ttttgatcac aataattaaa caaaagcggt tatttcatac gcgttcctgg aaaatgtcga
    15301 tatttttaat ttatggctac gaaatgagca tcgccatgtc tccctgacca tctaccgaga
    15361 ggaatgattc tgatgaatgc actgactgcc gtaaaagcga acacagatga tttagcccaa
    15421 cgccatactg gtttcatcct tgccccttcg gcgcagtcgc cgcgcctgct ggcgttaacg
    15481 tttacggcgg ataccacaag acaatttctc catcaggttg cgcagtggcc ggtgcaggcg
    15541 ctggaataca aatctttctt acgtttcaaa atcggcaaga tcctcgacga tctgtgcggc
    15601 aatcagctac aaccgctgtt gatcaaaacg ctcctcaacc gtgcacaagg cgcgctgttg
    15661 atcagcgccg aagggatcga tgatgtcgca caggcagaag agatggtcaa actggcgacg
    15721 gcggtggcgc atcttattgg tcgctccaac tacgatgcga tgagcggcca gtattacgcg
    15781 cgtttcgtgg tcaaaaacgt cgacaactcc gacagttatc tgcgccagcc ccaccgcgta
    15841 atggaactgc acaatgacgg tacctatgtt gaggaggtga ccgactacgt gctgatgatg
    15901 aaaatcgacg aacaaaatat ggaaggcggt aattcgctgc tgctgcacct tgatgactgg
    15961 gaacatctgg agtcgttttt tacccatccg ctggcgcgtc gcgtcatgcg ctgggcggcg
    16021 ccgccaagca agaatgttag ccatgacgtc tggcacccgg tgtttgatgt cgaccaacaa
    16081 ggccgcccgg tcatgcgtta tatcgaccag ttcgtccagc caaaagactt tgaagaaggc
    16141 gtctggctca gcgagctttc agacgcgctg gaaaccagtc aaaacatcct ctccgtgccg
    16201 gtaccggtcg gcaaattcct gctgattaac aatctgttct ggctacatgg acgcgatcgt
    16261 tttacgccgc atcctgactt gcgtcgcgag ctgatgcgcc agcgcggtta cttcgcctac
    16321 gccgccagcc attatcaaac tcaccaataa gcgccacggc gaaggaatta cgcggatgta
    16381 tgattttgtg attatcggcg gcggcattat cggcatgtcg accgccatgc aacttattga
    16441 tgtctacccg gatgcgcgca tcgcgttgct ggaaaaagag tccgcgccag cctgccacca
    16501 gaccgggcat aacagcggcg tgatccatgc cggggtgtac tacacgcccg gcagcctcaa
    16561 agcgcggttt tgtctggcgg gcaatcaggc gaccaaaacc ttttgcgatc aaaacaacat
    16621 ccgctacgac acctgcggca aaatgttggt cgccacctcg gagctggaaa tggcgcggat
    16681 gcgcgcgcta tgggagcgga cggcggccaa cggcttagag cgcgagtggt taaacgcggc
    16741 ggagctgcgt gaacgcgaac ccaatatcat tggcctgggc gggatttttg tcccttccag
    16801 cgggattgtc agctatcgcg atgtcgcgac ggccatggcg aaccgctttc aggccaaagg
    16861 cggcgagatc atctaccatg ccgaggtcag cgcgctaaca gaacatgccg ctggcgttat
    16921 cattcgcact tcgcaaggcc gagaaatcga aaccgctacg cttatcggct gtgcagggct
    16981 gatggcggat cggctggtca aaatgctggg cgtggagccc ggttttatta tctgcccttt
    17041 ccgcggcgag tactttcgtc tggccccgcg acacaaccgg atcgttaacc atttgatcta
    17101 cccgatcccc gatccggcaa tgccgtttct cggcgtccac cttacccgca tgatcgacgg
    17161 cagcgtcacg gtcgggccga atgcggtgct ggcgcttaaa cgcgaaggct accgtaagcg
    17221 cgacgtttcc ttcaccgaca ccctggagat tttccgctcc gccggcattc gccgcgtact
    17281 gcaaaaccat ctgctttccg gactgggcga gatgaaaaac tcgctgtgca aaagcggcta
    17341 tttgcggcga gtacaaaagt attgccccag cctgaccgtc aacgatctcc agccctggcc
    17401 ggcaggcgtg cgggcgcagg cggtttcgcc ggacggcaaa ctgattgatg attttctgtt
    17461 tg
//
LOCUS       DAGWFR010000076        17203 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.077, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000076 DAGWFR010000000
VERSION     DAGWFR010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 17203)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17203)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17203
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.077"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(21..108)
                     /locus_tag="MOX77_002617"
     tRNA            complement(21..108)
                     /locus_tag="MOX77_002617"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(72..74),aa:Ser,seq:gga)
     gene            344..1282
                     /gene="ghrA"
                     /locus_tag="MOX77_002618"
     CDS             344..1282
                     /gene="ghrA"
                     /locus_tag="MOX77_002618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxylate/hydroxypyruvate reductase GhrA"
                     /protein_id="HCA3358108.1"
                     /translation="MEIIFYHPTFNAAWWVNALEKALPHARVREWKVGDNNPADYALV
                     WQPPVEMLAGRRLKAVFVLGAGVDAILSKLNAHPEMLDASIPLFRLEDTGMGLQMQEY
                     AASQVLHWFRRFDDYQALKNQALWKPLPEYTREEFSVGIIGAGVLGAKVAESLQAWGF
                     PLRCWSRSRKSWPGVESYVGREELRAFLNQTRVLINLLPNTAQTVGIINSELLDQLPD
                     GAYVLNLARGVHVQEADLLAALDSGKLKGAMLDVFSQEPLPQESPLWRHPRVAMTPHI
                     AAVTRPAEAIDYISRTITQLEKGEPVTGQVDRARGY"
     gene            1367..2104
                     /locus_tag="MOX77_002619"
     CDS             1367..2104
                     /locus_tag="MOX77_002619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase"
                     /protein_id="HCA3358109.1"
                     /translation="MYPVDLHMHTVASTHAYSTLSDYIAEAKRKGIKLFAITDHGPDM
                     EDAPHHWHFINMRIWPRLVDGVGILRGIEANIKNINGEIDCSGKMFDSLDLIIAGFHE
                     PVFAPHDKETNTQAMIATIASGKVHIISHPGNPKYPVEVKAIAQAAAKHHVALEINNS
                     SFLHSRKGSEDNCRAVAAAVRDAGGWVALGSDSHTAFTLGDFTECRKILDAVNFPEDR
                     ILNVSPQRLLAFLESRGMAPVPEFAEL"
     gene            2128..2682
                     /locus_tag="MOX77_002620"
     CDS             2128..2682
                     /locus_tag="MOX77_002620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone"
                     /protein_id="HCA3358110.1"
                     /translation="MNEFSILCRVLGSLFYRQPQDPLLVPLFTLIREGKLAANWPLEQ
                     DDMLARLQKSCDITQISTDYNALFVGEECAVAPYRSAWVEGAEESEVRAFLTSRGMPL
                     ADTPADHIGTLLLAASWLEDQSAEDESEALETLFADYLLPWCNTFLGKVEAHAVTPFW
                     RTLAPLTRDAIGAMWDELQEEDEE"
     gene            2783..3265
                     /locus_tag="MOX77_002621"
     CDS             2783..3265
                     /locus_tag="MOX77_002621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001675581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1097 domain-containing protein"
                     /protein_id="HCA3358111.1"
                     /translation="MNILLSIAITTGILSGIWGWVAVSLGLLSWAGFLGCTAYFACPQ
                     GGFKGLLISACTLLSGMVWALVIIHGSALAPHLEIVSYVLTGIVAFLMCIQAKQLLLS
                     FVPGTFIGACATFAGQGDWRLVLPSLALGLIFGYAMKNSGLWLASRREQHSANTAVTK
                     "
     gene            complement(3303..4136)
                     /gene="csgG"
                     /locus_tag="MOX77_002622"
     CDS             complement(3303..4136)
                     /gene="csgG"
                     /locus_tag="MOX77_002622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="curli production assembly/transport protein
                     CsgG"
                     /protein_id="HCA3358112.1"
                     /translation="MPRLLILVAVLLLSGCLTAPPKQAAKPTLMPRAQSYKDLTHLPA
                     PTGKIFVSVYNIQDETGQFKPYPASNFSTAVPQSATAMLVTALKDSRWFIPLERQGLQ
                     NLLNERKIIRAAQENGTVAMNNRIPLQSLTAANIMVEGSIIGYESNVKSGGVGARYFG
                     IGADTQYQLDQIAVNLRVVNVSTGEILSSVNTSKTILSYEVQAGVFRFIDYQRLLEGE
                     IGYTSNEPVMLCLMSAIETGVIFLINDGIDRGLWDLQNKADRQNDILVKYRELSVPPE
                     S"
     gene            complement(4163..4579)
                     /gene="csgF"
                     /locus_tag="MOX77_002623"
     CDS             complement(4163..4579)
                     /gene="csgF"
                     /locus_tag="MOX77_002623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="curli production assembly/transport protein
                     CsgF"
                     /protein_id="HCA3358113.1"
                     /translation="MRVKHAVVLLMLFSPLTWAGNMTFQFRNPNFGGNPNNGSFLLNS
                     AQAQNSYKDPAYDNDFGIETPSALDNFTQAIQSQILGGLLTNINTGKPGRMVTNDFII
                     DIANRDGQLQLNVTDRKTGRTSTIEVSGLQTQSTDF"
     gene            complement(4606..5001)
                     /gene="csgE"
                     /locus_tag="MOX77_002624"
     CDS             complement(4606..5001)
                     /gene="csgE"
                     /locus_tag="MOX77_002624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="curli production assembly/transport protein
                     CsgE"
                     /protein_id="HCA3358114.1"
                     /translation="MKRYLTWIVAAELLFATGNLHANEVEVEVPGLLTDHTVSSIGHE
                     FYRAFSDKWESEYTGNLTINERPSARWGSWITITVNQDVIFQTFLFPMKRDFEKTVVF
                     ALAQTEEALNRRQIDQTLLSTSDLARDEF"
     gene            complement(5030..5656)
                     /gene="csgD"
                     /locus_tag="MOX77_002625"
     CDS             complement(5030..5656)
                     /gene="csgD"
                     /locus_tag="MOX77_002625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator CsgD"
                     /protein_id="HCA3358115.1"
                     /translation="MFNEVHSSHGHTLLLITKPSLQATALLQHLKQSLAITGKLHNIQ
                     RSLEDISAGCIVLMDMMEADKKLIHYWQDNLSRKNNNIKTLLLNTPDDYPYREIENWP
                     HINGVFYATEDQEHVVSGLQGILRGECYFSQKLASYLITHSGNYRYNSTESALLTHRE
                     KEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVS"
     gene            6412..6867
                     /gene="csgB"
                     /locus_tag="MOX77_002626"
     CDS             6412..6867
                     /gene="csgB"
                     /locus_tag="MOX77_002626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="curlin minor subunit CsgB"
                     /protein_id="HCA3358116.1"
                     /translation="MKNKLLFMMLTILGAPGIATATNYDLARSEYNFAVNELSKSSFN
                     QAAIIGQVGTDNSARVRQEGSKLLSVISQEGENNRAKVDQAGNYNFAYIEQTGNANDA
                     SISQSAYGNSAAIIQKGSGNKANITQYGTQKTAVVVQKQSHMAIRVTQR"
     gene            6909..7364
                     /gene="csgA"
                     /locus_tag="MOX77_002627"
     CDS             6909..7364
                     /gene="csgA"
                     /locus_tag="MOX77_002627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="curlin major subunit CsgA"
                     /protein_id="HCA3358117.1"
                     /translation="MKLLKVAAFAAIVVSGSALAGVVPQWGGGGNHNGGGNSSGPDST
                     LSIYQYGSANAALALQSDARKSETTITQSGYGNGADVGQGADNSTIELTQNGFRNNAT
                     IDQWNAKNSDITVGQYGGNNAALVNQTASDSSVMVRQVGFGNNATANQY"
     gene            7426..7752
                     /gene="csgC"
                     /locus_tag="MOX77_002628"
     CDS             7426..7752
                     /gene="csgC"
                     /locus_tag="MOX77_002628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="curli assembly protein CsgC"
                     /protein_id="HCA3358118.1"
                     /translation="MHTLLLLAALSNQITFTTTQQGDIYTVIPQVTLNEPCVCLVQIL
                     SVRDGVGGQSHTQQKQTLSLPANQPIELSRLSVNISSEDSVKIIVTVSDGQSLHLSQQ
                     WPPSAQ"
     gene            7884..8204
                     /locus_tag="MOX77_002629"
     CDS             7884..8204
                     /locus_tag="MOX77_002629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrial protein"
                     /protein_id="HCA3358119.1"
                     /translation="MSVIKKNIPAIGLCICAFFIHSAVGQQTVQGGVIHFRGAIVEPL
                     CDISTHAENIDLTCLREGKKQMHRIDLRQASGLPQDIQSIATVRLHYLDAQKSLAVMN
                     IEYR"
     gene            8292..8831
                     /gene="ymdB"
                     /locus_tag="MOX77_002630"
     CDS             8292..8831
                     /gene="ymdB"
                     /locus_tag="MOX77_002630"
                     /EC_number="3.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetyl-ADP-ribose deacetylase"
                     /protein_id="HCA3358120.1"
                     /translation="MTSRLQVIQGDITQLSVDAIVNAANASLMGGGGVDGAIHRAAGP
                     ALLDACKLIRQQQGECQTGHAVITPAGKLSAKAVIHTVGPVWRGGEHQEAELLEEAYR
                     NCLLLAEANHFRSIAFPAISTGVYGYPRAQAAEVAVRTVSDFITRYALPEQVYFVCYD
                     EETARLYARLLTQQGDDPA"
     gene            8767..10254
                     /locus_tag="MOX77_002631"
     CDS             8767..10254
                     /locus_tag="MOX77_002631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706957.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D family protein"
                     /protein_id="HCA3358121.1"
                     /translation="MMKKLPGFTQDYLLSKATTLPDKTRLERAVEPLCARHPGECGIL
                     ALDNSLDAFAARYRLTEMAARTLDVQYYIWEDDMSGRLLFSVLLSAAKRGVHVRLLLD
                     DNNTPGLDDTLRLLDSHPNIEVRLFNPFSFRTLRALGYLTDFARLNRRMHNKSYTADG
                     VVTLVGGRNIGDAYFGAGEEPLFSDLDVMAIGPVVNDVANDFERYWRCSSVSTLQQVL
                     SLSEQELTQRIELPESWYNDEITRRYLHKLETSQFMADLDRGTLPLIWAKTRLLSDDP
                     SKGEGKAQRHSLLPQRLFDVMGSPTERIDIISAYFVPTRAGVAQLLNLVRKGVKIAIL
                     TNSLAANDVAVVHAGYARWRKKLLRYGVELYELKPTREHETAVHDRGLTGNSGSSLHA
                     KTFSIDGSKVFIGSLNFDPRSTLLNTEMGFVIESETLATLIHKRFTQSQRDAAWQLRL
                     DRWGRINWIDRQQEEEKVLKKEPATRFWQRVLVRLAAILPVEWLL"
     gene            complement(10271..11425)
                     /gene="mdoC"
                     /locus_tag="MOX77_002632"
     CDS             complement(10271..11425)
                     /gene="mdoC"
                     /locus_tag="MOX77_002632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucans biosynthesis protein MdoC"
                     /protein_id="HCA3358122.1"
                     /translation="MSSVPAPREYFLDSIRAWLMLLGIPFHISLIYSTHSWHVNSAAP
                     SWWLTLFNDFIHAFRMQVFFVISGYFSYMLFLRYPLKHWWKVRVERVGIPMLTAIPLL
                     TLPQFILLQYVKEKTENWPTLSAYEKYNTLAWELISHLWFLLVLVILTTVSIGIFTWF
                     QKRQETSKPRPAAISLAKLSLIFFLLGVAYAAIRRIIFIVYPAILSDGMFNFIVMQTL
                     FYVPFFILGALAFIHPDLKARFTTPSRGCTLGAAVAFIAYLLNQRYGSGDAWMYETES
                     VITMVMGLWMVNVVFSLGHRLLNFQSARVTYFVNASLFIYLVHHPLTLFFGAYITPHI
                     SSNLIGFLCGLIFVMGIALILYEIHLRIPLLKFLFSGKPPVKQESRAAIG"
     gene            11697..13232
                     /gene="mdoG"
                     /locus_tag="MOX77_002633"
     CDS             11697..13232
                     /gene="mdoG"
                     /locus_tag="MOX77_002633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucans biosynthesis protein MdoG"
                     /protein_id="HCA3358123.1"
                     /translation="MMKMRWLGAAIMLTLYASSSWAFSIDDVAKQAQSLAGKGYEAPK
                     SNLPSVFRDMKYADYQQIQFNSDKAYWNNLKTPFKLEFYHQGMYFDTPVKINEVTATT
                     VKRIKYSPDYFNFGNVQHDKDTVKDLGFAGFKVLYPINSKDKNDEIVSMLGASYFRVI
                     GAGQVYGLSARGLAIDTALPSGEEFPRFREFWIERPKPTDKRLTVYALLDSPRATGAY
                     RFVIIPGRDTVVDVQSKVYLRDKVGKLGVAPLTSMFLFGPNQPSPTTNYRPELHDSNG
                     LSIHAGNGEWIWRPLNNPKHLAVSSYAMENPQGFGLLQRGREFSRFEDLDDRYDLRPS
                     AWITPKGDWGKGKVELVEIPTNDETNDNIVAYWTPDQLPEPGKEMNFKYTLTFSRDED
                     KLHAPDNAWVLQTRRSTGDVKQSNLIRQPDGTIAFVVDFVGADMKKLPPDTPVAAQTS
                     IGDNGEIVDSNVRYNPVTKGWRLMLRVKVKDAKKTTEMRAALVNADQTLSETWSYQLP
                     ANE"
     gene            13225..15768
                     /gene="mdoH"
                     /locus_tag="MOX77_002634"
     CDS             13225..15768
                     /gene="mdoH"
                     /locus_tag="MOX77_002634"
                     /EC_number="2.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001044602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucans biosynthesis glucosyltransferase MdoH"
                     /protein_id="HCA3358124.1"
                     /translation="MNKTTEYIDALLLSEREKAALPKTDIRAVHQALDAEHRTYSRED
                     DSPQGSVKARLEHAWPDSLAKGQLIKDDEGRDQLQAMPKATRSSMFPDPWRTNPVGRF
                     WDRLRGRDVTPRYVSRLTKEEQASEQKWRTVGTIRRYILLILTLAQTVVATWYMKTIL
                     PYQGWALINPMDMVGQDIWVSFMQLLPYMLQTGILILFAVLFCWVSAGFWTALMGFLQ
                     LLIGRDKYSISASTVGDEPLNPEHQTALIMPICNEDVSRVFAGLRATWESVKATGNAA
                     HFDVYILSDSYNPDICVAEQKAWMELIAEVQGEGQIFYRRRRRRMKRKSGNIDDFCRR
                     WGNQYSYMVVLDADSVMSGECLSGLVRLMEANPNAGIIQSSPKASGMDTLYARCQQFA
                     TRVYGPLFTAGLHFWQLGESHYWGHNAIIRVKPFIEHCALAPLPGEGSFAGSILSHDF
                     VEAALMRRAGWGVWIAYDLPGSYEELPPNLLDELKRDRRWCHGNLMNFRLFLVKGMHP
                     VHRAVFLTGVMSYLSAPLWFMFLALSTALQVVHALTEPQYFLQPRQLFPVWPQWRPEL
                     AIALFASTMVLLFLPKLLSIMLIWCKGTKEYGGFWRVTLSLLLEVLFSVLLAPVRMLF
                     HTVFVVSAFLGWEVVWNSPQRDDDSTPWGEAFMRHGSQLLLGLVWAVGMAWLDLRFLF
                     WLAPIVFSLILSPFVSVISSRSTVGLRTKRWKLFLIPEEYSPPQVLVDTDKYLEMNRR
                     RILDDGFMHAVFNPSLNALATAMATARHRASKVLEIARDRHVEQALNETPEKLNRDRR
                     LVLLSDPVTMARLHYRVWNAPERYSSWVNHYQSLVLNPQALQGRTSSAG"
     gene            15842..16069
                     /locus_tag="MOX77_002635"
     CDS             15842..16069
                     /locus_tag="MOX77_002635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceK/YidQ family lipoprotein"
                     /protein_id="HCA3358125.1"
                     /translation="MRIFAVSIMVITLSGCGSIISRTIPGQGHGNQYYPGVQWDMRDS
                     AWRYITILDLPFSLIFDTLLLPLDIHHGPYE"
     gene            complement(16070..16444)
                     /locus_tag="MOX77_002636"
     CDS             complement(16070..16444)
                     /locus_tag="MOX77_002636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="secY/secA suppressor protein"
                     /protein_id="HCA3358126.1"
                     /translation="MTMYATLEEAIDAAREEFLADHPGLEQDEANVQQFNVQKYVLQD
                     GDIMWQVEFFADEGEDGECLPMLSGEAAQSVFDGDYDEIEIRQEWQEENTLHEWDEGE
                     FQLEPPLDTEEGRTAADEWDER"
     gene            complement(16526..>17203)
                     /locus_tag="MOX77_002637"
     CDS             complement(16526..>17203)
                     /locus_tag="MOX77_002637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3358127.1"
                     /translation="LFICFLLTFFFIRENFLPVSKKEMLHVREVVASLKNPRLVLSLF
                     VTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGD
                     RIGPEKILIVALIISVLLLIPMSFVQTPWQLALLRFLLGAADGALLPAVQTLLVYNST
                     NQIAGRIFSYNQSFRDIGNVTGPLMGAAISASYGFRAVFCVTAGVVLFNAIYSWNSLR
                     RRRLAIE"
BASE COUNT         4282 a         4121 c         4479 g         4321 t
ORIGIN      
        1 acaggctctc aacttgaaga tggcggtgag ggggggattc gaacccccga tacgttgccg
       61 tatacacact ttccaggcgt gctccttcag ccactcggac acctcaccaa attgtcgctc
      121 cagcattact ggaacgggcg ctaatgtagg gaaatatcct ttctacgtca atcaactttt
      181 ttaaaaaaaa gcgcttttat acaaacttcc atcaatctgt ggctttaata agcgaaaact
      241 gctttttttg cccgcgccgg gaaatttgct atgctgcaca tcccgttgaa aacgctgata
      301 acaggcgcaa tcacattccg cacaatactg ctcaggagat aacatggaga taatttttta
      361 tcacccgaca tttaacgccg cctggtgggt aaatgcgctg gagaaggctc tcccacatgc
      421 gcgcgttcgt gaatggaagg tcggtgataa caaccccgca gactatgcgc ttgtatggca
      481 gcccccggtt gaaatgctgg ccggaagacg cttaaaagcc gtctttgtgc tgggcgcggg
      541 ggtggatgca attctgagta aattaaatgc gcatccggaa atgctggacg cctccattcc
      601 tctattccgt ctggaagata ccggaatggg cctgcaaatg caggagtatg ccgccagcca
      661 ggtattacac tggttccgtc gtttcgatga ttatcaggcg ctgaaaaatc aggcgctatg
      721 gaaaccgttg ccggaatata cccgcgaaga gtttagcgtc ggtatcatag gcgcaggggt
      781 actgggcgca aaagtggcag aaagtctaca ggcgtggggg ttcccgttac gttgctggag
      841 tcgtagccgc aaatcctggc ctggcgtgga aagttatgta gggcgtgaag aactgcgcgc
      901 tttcctgaac cagacgcggg tgctgattaa tctgctgccg aatacggccc aaacggtagg
      961 aattattaat agcgaattgt tggatcaatt gccggatggc gcttacgtgc tgaatctcgc
     1021 gcgcggcgtt catgttcagg aggcggatct gctggctgcg cttgatagcg gtaagctaaa
     1081 aggcgcgatg ttggatgtct ttagccagga accgttaccg caggaaagtc cattatggcg
     1141 ccatccgcga gtcgccatga cgccgcacat tgcggcagtc acccgtccgg cggaagccat
     1201 cgattatatt agccgcacca ttacccagct ggagaaggga gagccggtga cggggcaggt
     1261 ggatcgggcg agaggatatt gatatcaacc cggcgcgggc cgggtttcgc taaaaaacgc
     1321 tggcgatacc tgctatcctt gtcggaaatg actacaggag agagcaatgt atcccgttga
     1381 cctgcatatg cataccgtcg ccagcactca tgcctacagt actctgagcg attatatcgc
     1441 ggaagccaaa cgcaaaggca ttaaactttt tgcgattacc gatcatggtc cggacatgga
     1501 agatgcgccg catcactggc attttattaa catgcgcatc tggccgcgtc tggttgacgg
     1561 cgtggggata ctgcgtggca ttgaggcgaa tatcaagaat attaacggtg aaattgattg
     1621 ttccggaaag atgttcgact cgctggatct gattatcgca ggctttcatg agcccgtttt
     1681 tgcgccgcat gataaagaaa ccaatactca ggcgatgatc gcgaccatcg ccagcggcaa
     1741 ggtgcatata attagtcacc ccggaaatcc aaagtatcca gtggaggtta aagccatcgc
     1801 gcaggcggcg gcgaaacacc atgtagcgct ggaaatcaac aactcttctt ttctgcattc
     1861 gcgtaaagga agcgaagata attgccgcgc ggtcgctgcc gccgtacgcg atgcgggagg
     1921 ctgggtagcg ttaggctctg attcccatac ggcctttacg cttggcgatt tcaccgaatg
     1981 ccggaaaatt ctggatgcgg tgaattttcc ggaagatcga atcctgaacg tctctccgca
     2041 gcgcttactg gcctttctcg aatcacgcgg tatggcgcct gtaccggaat ttgccgaact
     2101 ttaatcgtta tttacgggaa gatatcaatg aatgagtttt caatcctgtg ccgtgtgctg
     2161 ggatcgttgt tttaccgcca accgcaagat cctttactgg ttccgctgtt tacgttaatc
     2221 cgtgaaggta aactggcggc aaactggccg ctggagcagg atgacatgct ggcgcgttta
     2281 cagaaaagct gcgatatcac gcagatttcc actgattaca atgcgttatt tgttggggaa
     2341 gagtgcgcgg tagcgccata ccgcagtgcg tgggtcgaag gcgcggaaga gtctgaggtg
     2401 cgcgcttttt taacgtcgcg agggatgccg ctggccgata cgcctgccga tcacattggc
     2461 actttattgc tcgcggcctc ctggctggaa gatcagtctg ccgaagatga aagtgaagcg
     2521 ctggaaacct tatttgccga ttatctgctt ccctggtgca ataccttcct cggtaaagtt
     2581 gaagcccatg ccgttacgcc attctggcgc actctggcgc cgctaacgcg tgatgcgata
     2641 ggggccatgt gggatgaact tcaggaagaa gatgaagaat aatgtgatgt aaatcaccat
     2701 taactgcaac gggttttgca tcattgcata aaatgtgtgc gtgatctcat taatgtgccg
     2761 cttttctgtt atgatgcgcg ccatgaacat acttctttct attgctatca ctacgggcat
     2821 cctttctgga atatggggat gggtggccgt ctccctgggg ttactaagct gggccggttt
     2881 tttaggctgt acggcttatt tcgcctgtcc gcagggcggc tttaagggat tgttgatttc
     2941 cgcctgtacg ctgttaagcg gtatggtgtg ggcgctggtc attattcacg gtagcgcgtt
     3001 ggcgccgcat ctggaaattg tcagttacgt gttgacgggg atcgtggcat tcctgatgtg
     3061 tatccaggca aagcagctat tgctttcttt tgttccggga acatttatcg gcgcctgcgc
     3121 gacatttgca gggcagggtg actggcggtt ggtattaccg tcgctggcgc tggggctaat
     3181 ctttggctat gccatgaaaa atagtgggct atggctggca tcacgccgcg agcaacattc
     3241 agcgaatacg gcggtcacaa aataaaaaag cgtggggttt tccccacgct ttgtcgtatt
     3301 catcaggatt ctggcggtac tgacagctca cggtatttca ccagaatatc attttgcctg
     3361 tccgctttat tctgcaaatc ccacagtccg cgatcgatac catcattaat gaggaagata
     3421 acgccggttt caatggctga catcagacac agcatcaccg gttcgttcga ggtatagccg
     3481 atttcgcctt ccagtaagcg ctggtaatca ataaaacgga acacgcctgc ctgtacttca
     3541 taggaaagga tcgttttact ggtgttcacc gaagaaagga tctcgcccgt actgacgtta
     3601 accacgcgca ggttgacagc aatctgatcc agctgatact gcgtatcggc gccaataccg
     3661 aaatatcttg cgccgacccc gccggatttg acgttacttt cataaccaat aatagaacct
     3721 tccaccataa tatttgccgc cgtcaacgac tgaagcggga tacggttatt catcgccacg
     3781 gtgccgtttt cctgggctgc gcgaataatt ttccgttcat tcaaaagatt ctgtaagcct
     3841 tgtcgttcta gtgggataaa ccagcgcgaa tctttcagcg cggtgaccaa catagcggtg
     3901 gcgctctgcg gcacagccgt ggaaaagtta cttgccgggt aaggtttaaa ttggcccgtt
     3961 tcatcctgaa tgttatatac cgaaacaaag atcttaccgg tgggagcagg taagtgcgtc
     4021 aaatctttgt aactttgtgc gcggggcatt aatgtcggtt tcgcagcttg tttcggcggg
     4081 gcagttaagc atccgctcaa caataaaacg gcaaccaaaa taagtaagcg cggcatgatt
     4141 tatatccttt agtgactgta gcttaaaaat cggttgactg agtttgtaaa cctgacactt
     4201 cgatggtcga ggttcttccc gtttttctgt ccgtgacgtt gagctggagc tgtccgtcgc
     4261 gattagcgat atcgataata aaatcattgg tcaccatacg tcctggtttt ccggtattaa
     4321 tattggtcaa caagccgccc agaatttgcg attgaatagc ctgcgtaaag ttatccaacg
     4381 ctgagggggt ctcgatacca aaatcgttat cataagcggg gtctttatat gaattttgcg
     4441 cctgggcgct attcaataaa aaggaaccgt tattggggtt tccaccaaag ttaggattac
     4501 ggaactggaa cgtcatattt ccagcccagg ttaatggcga aaaaagcatg agcagcacta
     4561 ctgcatgttt aacacgcatg acagcctccg gataaaaatc atgttttaga attcatcacg
     4621 cgctaaatca ctcgtactta atagcgtttg atctatttgt cggcgattta atgcttcctc
     4681 tgtttgcgct aatgcgaaga cgacggtttt ctcgaagtct cttttcattg gaaataaaaa
     4741 ggtctggaaa ataacgtcct gatttaccgt tatggtgatc cagcttcccc aacgcgcact
     4801 gggtctttca ttaatggtca gattgccggt gtattcgctt tcccatttgt cgctgaatgc
     4861 acgatagaat tcatgtccta tcgaagagac ggtatggtcg gttaacaatc cgggaacctc
     4921 gacttcaact tcattggcat gcaggtttcc ggtagcgaac agtaactctg ctgctacaat
     4981 ccaggtcaga tagcgtttca tggccttacc gcctgagatt atcgtttgct catgaaactg
     5041 cctgggtgcg atttttgaca gctatctttt tgaaaagatt ataaagatgt gtcttaaccg
     5101 tattctcgct gataaatagc gacctggcga tttcattatt agaggcacca atacgtaact
     5161 tattgaggat ctctttttcg cgatgagtga gtaatgcgga ctcggtgctg ttgtagcggt
     5221 aatttcctga gtgtgtaatc aggtaactgg ctaatttttg tgaaaaatag cattcgcccc
     5281 gcagaatacc ctgtaatccg ctgaccacgt gttcctggtc ttcagtggcg taaaacacgc
     5341 cgttaatatg aggccagttt tcaatttcac ggtagggata atcgtcaggg gtatttaaca
     5401 ataatgtttt tatattattg tttttgcggc ttaaattatc ctgccaatag tggataagct
     5461 tcttatccgc ttccatcata tccattaaaa caatgcaacc ggctgagata tcttccagag
     5521 aacgttgaat attatgcagt tttccggtta tggccagcga ttgctttaaa tgttgcaata
     5581 atgccgtagc ttgcagagat ggctttgtga tcaacaatag tgtgtgacca tgactactat
     5641 ggacttcatt aaacatgatg aaactccact ttttttaatc gcacatctga cagctgcccc
     5701 cataaaataa aggcaccaga agtactgaca gatgttgcac tgctgtgggt tgaaatagcc
     5761 cattatccag aaagagaaaa atatttacga aaatactttt aactgttttc aatctagcca
     5821 ttacaaatct taaagcaagt gttaaacttg taacaagatg taaaaatata tattaaaatg
     5881 ttgtttttgg gtttttttga agtttagatt tgatagtaaa gttgtacatt tcgctgttat
     5941 tgcatagatt taaaaaatca tacaaattat aataattcat tgatttttaa tcattttaat
     6001 tattgtatgt catgttttga ttttattttt tcttaaaatt tgagacgtgg cattaacctg
     6061 gacagcacaa agacaaaaaa aaacgaagtg tgtcacgtct tgtgcgtatt gccccccatg
     6121 ggaagcataa gaacatcccc atggcggcat aacacacacc aacacttcat tttttaggtg
     6181 cgcgatacac tatcttctgt ggccaaaaat caattataaa aaatcacatg gctatcgttt
     6241 tattagcact ttggtatgag cttaaataac aaaataccac gcgtgggtga gttattaaaa
     6301 atgtttccac ggacatactc ttcatcgtaa cgacgcgtta acaaaaaacg catgtcgcta
     6361 acaaggtaat agataatttt cgctatgtac gaccaggtcc agggtgacag catgaaaaac
     6421 aaattgttat ttatgatgtt gacaatactg ggtgcgcctg ggattgcaac cgcgacaaat
     6481 tatgatctgg ctcgttcaga gtataatttt gcggtaaatg aattaagcaa gtcttcattt
     6541 aatcaggcgg ccattattgg tcaagtcggc acggataata gtgccagagt acgccaggaa
     6601 ggatcaaaac tattgtccgt tatttcacaa gaaggagaaa ataatcgggc gaaagtcgac
     6661 caggcaggga attataactt tgcgtatatt gagcaaacgg gcaatgccaa cgatgccagt
     6721 atatcgcaaa gcgcttacgg taatagtgcg gctattatcc agaaaggttc tggaaataag
     6781 gccaatatta cccagtacgg tacgcagaaa acagcagttg tagtgcagaa acagtcgcat
     6841 atggctattc gcgtcaccca acgctaatac cgttacgact tttaaatcaa tccgatgggg
     6901 gttttaccat gaaactttta aaagtggcag cattcgcagc aatcgtagtt tctggcagtg
     6961 ctctggctgg cgtcgttcca caatggggcg gcggcggtaa tcataacggc ggcggcaata
     7021 gttccgggcc ggattccacg ttgagcattt atcagtacgg ttccgctaac gctgcgcttg
     7081 ctctgcaaag cgatgcccgt aaatctgaaa cgaccattac ccagagcggt tatggtaacg
     7141 gcgccgatgt aggccagggt gcggataaca gtactattga actgactcag aatggtttca
     7201 gaaacaatgc caccatcgac cagtggaacg ctaaaaactc cgatattact gtcggtcaat
     7261 acggcggtaa taacgccgcg ctggttaatc agaccgcatc tgattccagc gtaatggtgc
     7321 gtcaggttgg ttttggcaac aacgccacgg ctaaccagta ttaatttagc gtctgcgcta
     7381 ataaaaaaac agggcgtaag ccctgttttt tttcgggagg aaattatgca tactttattg
     7441 ctccttgccg cactttcaaa tcagattacg tttaccacga ctcagcaagg cgatatttac
     7501 acggtgatcc ctcaggtcac attaaacgaa ccctgcgtct gtctggtgca aattctctct
     7561 gtgcgcgacg gcgtcggggg acaaagccat acacagcaaa aacaaacgct atctttacct
     7621 gctaatcaac cgattgagtt gtctcgtctt agtgtaaata tatcttcaga ggactcggtt
     7681 aaaattattg ttactgtttc ggacggacaa tcactgcatt tatcacaaca atggccgcct
     7741 tctgcacagt agtttttgat ggtggcggaa atggattggc tgacctgggt attaaagagg
     7801 cgataaaagc gtctcatcgt ctcggcatgt cgctaaaagg taacgccgaa ccctcgagga
     7861 tgactaatca ttgaggagtt aacatgtccg taatcaagaa aaatatccct gccataggcc
     7921 tgtgtatctg cgcttttttt atccattctg cggtagggca acaaacggta cagggcggcg
     7981 ttatccattt tcgcggcgcg attgttgagc cactgtgcga tatttctact cacgccgaaa
     8041 atattgattt aacctgccta cgcgaaggta aaaagcaaat gcaccggata gaccttcggc
     8101 aggcatctgg attaccgcag gatattcagt ccattgcgac ggtacggctg cattatctcg
     8161 atgcgcaaaa aagcctggcg gtgatgaata ttgagtaccg ttaacggcgg tgtcatagat
     8221 ataaaaagag cgactctgtt gaaagccctg ctgtacactt tgcagataag gtgagacaaa
     8281 aggggggggt tatgacatca cgtcttcagg tcatacaggg tgatatcact caacttagcg
     8341 tcgatgcgat tgtgaatgcc gctaacgcat cattaatggg cggcggtggc gtagacggcg
     8401 caattcatcg cgcggcgggg ccggcattgc tggacgcctg taaactcatc cgtcagcaac
     8461 agggcgaatg tcagacggga catgcggtta tcacgcctgc tggcaagctt tcggcaaagg
     8521 cggttattca cacagtgggg cccgtctggc gaggcggcga acaccaggaa gctgagctac
     8581 tcgaagaggc ataccggaat tgtttgctgc ttgccgaggc gaatcacttt cgttccatcg
     8641 cttttccggc aatcagtacc ggcgtttatg gctatccacg cgcccaggcc gctgaagtcg
     8701 ccgtcaggac ggtttcagat tttattaccc gttacgctct gcctgaacag gtatactttg
     8761 tctgttatga tgaagaaact gcccggcttt acgcaagatt acttactcag caaggcgacg
     8821 accctgcctg ataaaacacg cctggagcgt gccgttgaac cgctatgcgc gcgccatccc
     8881 ggagagtgcg gcattcttgc gctggataac agtctggacg cttttgccgc ccgctaccgc
     8941 ctgaccgaaa tggcggcgcg gacgctggat gtgcagtatt atatttggga agacgatatg
     9001 tccgggcggc tgctcttttc ggttctgctg tcggcggcga agcgcggcgt tcatgttcgt
     9061 ctgctgctgg atgataacaa tacgcctggt ctggatgata cgttgcgctt gctggatagc
     9121 catcctaata tcgaagttcg tctgtttaat cctttctctt ttcgtacgct acgcgcgctg
     9181 ggatatttga cggattttgc gcggctgaat cggcggatgc acaataaaag ttacactgcc
     9241 gacggcgtag tgacgctggt cggtgggcgc aacatcggcg atgcctattt cggcgctggc
     9301 gaggagccgc tattttccga tctggacgtg atggccattg gcccggtggt caatgatgtc
     9361 gccaatgatt ttgaacgtta ctggcgctgt agttcagtgt cgacattgca gcaagtatta
     9421 tccctttctg agcaggaact gacgcagcgt atcgaacttc ccgaatcctg gtataacgat
     9481 gagatcaccc gccgttatct gcataagctg gaaaccagcc agtttatggc ggatctcgat
     9541 cgcggaacgt tgccgctgat ttgggcaaaa acacgcttgc ttagcgatga cccttctaaa
     9601 ggcgagggga aggcgcagcg ccattcgctt cttccgcagc gattatttga cgtgatgggg
     9661 tcgccgacgg agcgtatcga cattatttcc gcttactttg tccctacgcg cgcaggcgtg
     9721 gcgcagttgc ttaatctggt caggaaaggt gtgaagatcg ccatcttaac taactctctg
     9781 gcggccaacg atgtggcggt cgttcacgca gggtacgcgc gctggcgcaa gaaattactg
     9841 cgctatggcg tggagctcta cgaactgaaa ccgacccgcg aacatgaaac cgccgtacat
     9901 gatcgcggac tcaccgggaa ctcaggttcc agcttacatg ctaaaacgtt cagtattgat
     9961 ggtagtaagg tgtttatcgg gtcgcttaat tttgatcccc gttcaacgct tttaaatacc
    10021 gaaatgggct ttgtcattga aagtgaaacg ctggcgacgc ttattcataa gcgttttacg
    10081 cagagccaac gcgatgcggc ctggcaactg cggctggatc gctggggacg aattaactgg
    10141 atcgatcgtc agcaagaaga ggaaaaggtg ttaaagaaag aacccgctac gcgtttctgg
    10201 cagcgagttc tggtacggtt ggcggcaatt ttacctgtgg aatggttgct gtgaacccgc
    10261 gcgcggaaaa ctacccgatc gcggcgcggc tttcttgttt taccggcggt ttacctgaaa
    10321 agagaaattt caggagcggg atgcgtaaat gaatttcata cagaattaac gcaataccca
    10381 taacaaatat cagcccgcac aagaacccga tcaggttgga ggagatatgc ggtgtaatat
    10441 acgcgccaaa gaaaagcgtt aagggatgat gcaccagata aataaacagc gaagcattca
    10501 cgaaataggt gacacgcgcg gactgaaagt ttaacaagcg atgccccagt gaaaatacca
    10561 cgttcaccat ccatagcccc attaccatcg taatcacgga ttcggtttcg tacatccagg
    10621 cgtcgccgct cccataacgt tgattcagca gatacgcgat aaaagcaacg gcagcgccta
    10681 aagtgcatcc gcgtgagggc gtggtgaagc gcgctttcag atcggggtga atgaaggcca
    10741 acgcgccgag aataaaaaac ggcacataaa atagcgtttg catcacaata aaattgaaca
    10801 tgccgtcact gaggattgcc ggatatacga tgaatataat gcgcctgata gcagcgtacg
    10861 ccacccccag caggaaaaaa ataagcgaaa gtttggccag cgaaatagcg gcgggacgag
    10921 gcttgcttgt ttcctgcctt ttttggaacc aggtaaaaat cccgatgctg acggtggtta
    10981 atatcaccag caccagtaaa aaccacagat gtgaaatgag ttcccacgct aacgtattat
    11041 atttttcata ggcagagagt gtaggccagt tctctgtttt ctctttgaca tattgcaaca
    11101 ggataaattg cggcaaggta agcaaaggga ttgcggtaag catgggaata cccacacgtt
    11161 ctacccgtac tttccaccag tgttttaatg gataacgtaa aaataacatg tacgaaaaat
    11221 aaccagaaat aacaaaaaac acctgcatac gaaaagcgtg gataaaatcg ttaaacaggg
    11281 ttagccacca cgatggcgcg gcgctattga catgccaact gtgagtggaa tagatcaacg
    11341 agatatgaaa gggaatccct aacaacatca gccatgcgcg gatagagtca agaaaatatt
    11401 cacgcggcgc gggtacagag ctcatataag gtcacgtatt ctcagatttt tcaccttatc
    11461 cataaggcga attatagtta cattcggtag caaccctaca ccaactccga caacctgtct
    11521 ccaggataag cacgcaaagt gaaaacaggc gcgggaggtg cttaatccat gagccagcgc
    11581 gctgaacaaa gcctggattc agttgtcgta atgcctgatt atccattaaa atggatcgga
    11641 tcgatataag cacacaaagg gggaagtgct tacttattat gaaacataaa cgacaaatga
    11701 tgaaaatgcg ttggttgggc gcagctatta tgttaacgct ctacgcatca tcgagctggg
    11761 cgttcagtat tgatgacgtg gcaaaacaag ctcaatcttt agccgggaaa ggctatgagg
    11821 cgcctaaaag caacttgccc tccgttttcc gcgacatgaa atatgcggat tatcagcaga
    11881 tccagtttaa cagcgataaa gcctactgga acaacttaaa gacccctttt aagctcgaat
    11941 tttaccatca ggggatgtac ttcgatacgc cggtcaagat taacgaagtg acggcgacga
    12001 cggtcaaaag aatcaaatac agcccggatt acttcaattt tggcaatgtt cagcacgata
    12061 aagacacggt aaaagattta ggcttcgccg ggttcaaagt cctgtacccc attaacagta
    12121 aagataagaa cgacgaaatc gtcagtatgc ttggcgccag ctatttccgc gttatcggcg
    12181 caggccaggt gtatggctta tctgcgcgcg gcctggcgat tgataccgcc ttaccatctg
    12241 gtgaagagtt tccccgcttt cgcgagttct ggattgagcg tccaaaaccc accgataagc
    12301 gtttgaccgt ctatgcatta ctggattctc cgcgcgcgac cggcgcttac cgttttgtga
    12361 tcattcctgg ccgcgatacc gtggtggacg tgcagtcaaa agtctatctg cgcgataagg
    12421 tgggcaagct gggcgttgcg ccattaacca gtatgttcct gtttgggcca aaccagccgt
    12481 cgccgacgac caactatcgt ccggaattgc atgactcgaa cggcttatcc attcatgcgg
    12541 gtaatggcga gtggatttgg cgtccgctga acaatccaaa acacctcgct gtgagcagct
    12601 atgcgatgga aaaccctcag ggattcggcc tgttgcagcg tggtcgcgag ttctcgcgct
    12661 ttgaagattt agacgatcgc tatgacctgc gtccaagcgc ctggattacc ccgaaaggcg
    12721 actggggcaa aggtaaggtt gaactggttg aaattccgac caatgatgaa accaacgata
    12781 acatcgtcgc ttactggact ccggatcaac tgccggaacc gggtaaagag atgaacttca
    12841 agtacactct gaccttcagc cgcgatgaag ataaacttca tgcgccggat aatgcctggg
    12901 tgctgcaaac acgccgctca acgggcgacg ttaaacagtc gaatctgatt cgccagcccg
    12961 acggcactat tgcctttgtg gtggatttcg ttggcgccga catgaaaaaa ctgccgccgg
    13021 atacgcccgt cgctgcacaa accagcattg gcgataacgg tgaaatcgtt gacagtaatg
    13081 tacgctataa cccagtcact aaaggctggc gtttaatgct gcgcgtgaaa gtcaaagacg
    13141 cgaagaaaac cacggaaatg cgtgccgcat tggtgaatgc cgatcagacg ctaagtgaaa
    13201 cctggagcta ccagttacct gccaatgaat aaaacaactg agtatattga cgcactgctg
    13261 ctttctgaac gtgagaaagc ggcattgccg aaaactgaca tccgcgccgt gcatcaggcg
    13321 ctggatgccg agcatcggac ttactcgcga gaagacgatt caccgcaggg ttccgtaaaa
    13381 gcccgccttg aacacgcctg gccggattca ttggcgaagg ggcagttaat taaagatgat
    13441 gaagggcgcg atcagttgca ggctatgcca aaagcgacgc gctcttcgat gtttcctgat
    13501 ccctggcgaa ccaacccggt tggccgtttc tgggatcgcc tgcgtgggcg ggatgtaacg
    13561 ccgcgctatg tttctcgtct gacaaaagaa gagcaggcga gtgagcaaaa atggcgtacc
    13621 gtcggcacta tacgccgcta tattttgtta attttgactc tggcgcaaac cgtcgtcgcg
    13681 acctggtata tgaagaccat tctgccctat cagggatggg cgctcatcaa tcctatggat
    13741 atggtggggc aggatatttg ggtctccttt atgcagctcc tgccctacat gctgcaaacc
    13801 ggtatcctga ttttgtttgc cgtgctgttc tgctgggtgt ctgccggatt ctggacggcg
    13861 ctgatgggct tcctgcaact gcttatcggg cgcgataagt acagtatctc cgcgtctacg
    13921 gttggcgatg agcccctcaa tccggaacac cagacggcgc tgatcatgcc tatctgtaat
    13981 gaagacgtta gccgcgtttt cgccggtctg cgcgcgacct gggagtccgt taaagccaca
    14041 ggcaacgccg cgcattttga cgtctatatc cttagcgata gttataaccc ggatatctgc
    14101 gtggcggagc aaaaggcgtg gatggagctc atcgcggaag tgcagggcga aggccaaatt
    14161 ttttaccgtc gccgccgccg ccgtatgaaa cgcaaaagcg gcaatattga cgatttttgc
    14221 cgccgctggg gcaatcagta cagctatatg gtggtgctgg acgcggactc agtgatgagc
    14281 ggcgagtgtc tgagcgggct ggtgcgcctg atggaagcga accctaacgc cgggattatc
    14341 cagtcttcgc cgaaagcgtc ggggatggat actctgtatg cccgctgcca acagttcgcg
    14401 acccgtgttt atggaccgct gtttaccgcc gggctgcact tctggcagtt gggggagtcg
    14461 cactactggg ggcacaatgc cattatccgc gtgaagccgt ttatcgagca ctgcgctctg
    14521 gcgccgctgc cgggagaagg ttcgttcgcc ggatcgattc tttcccacga ctttgtggag
    14581 gcggcgctaa tgcgtcgggc agggtggggc gtctggattg cctacgatct ccccggctcc
    14641 tatgaagagc tgccgccaaa cctgctggat gagcttaaac gcgaccgccg ctggtgtcac
    14701 ggcaacctga tgaactttcg tctgttcctg gtgaaaggaa tgcacccggt gcatcgcgcc
    14761 gtgttcctga ccggggtaat gtcatacctg tccgcgccgt tatggtttat gttcctcgcg
    14821 ctttctaccg cgctgcaggt cgttcatgcg ttaacagagc cgcaatattt ccttcagccg
    14881 cgccagcttt ttccggtctg gccgcagtgg cgtccggaac tggcaatcgc gctgtttgcg
    14941 tcaacgatgg tgctgctgtt cctgccgaag ctgctcagta ttatgctgat ctggtgtaaa
    15001 ggcaccaaag agtatggcgg tttctggcgc gttacgctgt cgctattgct ggaagtgctg
    15061 ttctccgtgt tgctggcgcc ggtgcgtatg ctgtttcata ccgtgtttgt ggtcagcgcg
    15121 ttcctcggct gggaagtggt ctggaactca ccgcaacgcg acgatgattc tacgccgtgg
    15181 ggagaagcct ttatgcgtca cggctctcaa ctgctgctgg ggctggtctg ggcggtgggt
    15241 atggcgtggc tggatttacg ctttctgttc tggctggcgc cgattgtctt ttcgctgatt
    15301 ctgtcgccat ttgtttcggt gatctccagt cgttcaacgg taggattacg caccaaacgc
    15361 tggaagctgt tcctgatccc ggaagagtat tcgccgcctc aggtgttggt cgataccgat
    15421 aaatatctgg agatgaatcg ccgccgtatt ctggacgatg gctttatgca tgcggtattt
    15481 aacccgtcgc ttaatgcgct ggcgaccgcg atggccaccg cgcgtcaccg cgccagtaag
    15541 gtgctggaaa tagcccgcga tcgtcatgtg gagcaggcgc taaacgaaac gccggagaaa
    15601 ctgaaccgcg atcggcgtct ggttttgctc agcgatccgg tgacgatggc gcgtttacac
    15661 tatcgggtct ggaatgcgcc agagagatac tcttcctggg taaaccatta tcagtctctc
    15721 gtcctgaatc cgcaggcgtt gcagggacga acatcgtcag cgggataagg tcttcaggtc
    15781 tggagtgagg tgaaaaatac cggcgtgatg ccggtatttt tatagtgaaa tgaggtatca
    15841 ggtgcgtata ttcgcggtga gcataatggt gattaccctg agcggctgcg gcagtattat
    15901 cagcagaacg atccccggac aaggacacgg caaccagtat taccctggcg tgcagtggga
    15961 tatgcgtgat tccgcatggc gctatatcac tatcctcgat ctgcccttct cactgatctt
    16021 cgatacactg ctactgccgc tcgatattca ccacgggcct tatgagtaat taacgctcat
    16081 cccattcgtc tgccgcagta cggccttcct cggtatcaag cgggggttca agctggaatt
    16141 ccccttcatc ccattcatgc aaagtattct cttcctgcca ttcctggcgg atctctatct
    16201 catcataatc gccgtcaaac acgctctgtg cggcttcacc actcagcatc ggcagacatt
    16261 cgccatcttc accttcatcg gcgaaaaatt cgacctgcca catgatgtcc ccatcctgca
    16321 gtacatattt ctgaacgttg aactgctgca cattcgcttc gtcttgttcg aggcctggat
    16381 ggtcagccag aaattcttcc cgggctgcat cgatagcttc ttccagcgtg gcatacatgg
    16441 tcatcagtgt ctccctttga tttgacgagg tatttaggga aagaatagct gattctgtga
    16501 tattgcaagt atgaaagcgc aaaaatcatt ctattgccag tctgcgccgt cgtaagctgt
    16561 tccatgaata gatagcattg aacaacacca cgcctgccgt gacgcagaat acggcgcgga
    16621 agccatagct cgcggaaatt gcggcaccca tgagagggcc ggtgacgttg ccgatatcgc
    16681 ggaaagattg gttgtaactg aatatgcgcc cggctatctg gttggtagag ttgtaaacca
    16741 gcagagtttg aacggctggc agcagcgcgc catccgccgc gccaagcaga aaccgcaata
    16801 gcgcgagctg ccacggcgtt tgcacaaaag acattggaat cagcagcagt acggaaataa
    16861 tcagcgcgac gataaggatc ttttccgggc caattctgtc gccgagcttg ccgagccggg
    16921 gggcgctaag taatgccgcc acgccgggaa cggacgctat catcccgcta atgaacgcaa
    16981 tattactgac atttcccgcg agttcgcgca catagagcgt caggatgggc gcaatagacc
    17041 ccgtcgccac ctgaataatc agcgtggtga caaacaggct taacaccagg cggggatttt
    17101 ttaacgaggc gaccacttcc cgaacgtgaa gcatctcttt tttgctcacc ggcaggaaat
    17161 tctcgcgaat aaaaaagaag gtgagcagaa aacagataaa caa
//
LOCUS       DAGWFR010000077        17198 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.078, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000077 DAGWFR010000000
VERSION     DAGWFR010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 17198)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17198)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17198
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.078"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..684)
                     /locus_tag="MOX77_002638"
     CDS             complement(<1..684)
                     /locus_tag="MOX77_002638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129466.1"
                     /note="Catalyzes the transfer of electrons from NADH to
                     ubiquinone; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HCA3358128.1"
                     /translation="MNMLALTIILPLIGFVLLAFSRGRWSENLSATIGVGSVGLAALV
                     TAFVGMDFFANGKQAFSQPLWTWMSVGNFNIGFNLVLDGLSLTMLSVVTGVGFLIHMF
                     ASWYMRGEEGYSRFFAYTNLFIASMVVLVLSDNLLLMYLGWEGVGLCSYLLIGFYYSD
                     PKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHFADGNNMLMWA
                     TLMLLGGAVG"
     gene            complement(681..983)
                     /gene="nuoK"
                     /locus_tag="MOX77_002639"
     CDS             complement(681..983)
                     /gene="nuoK"
                     /locus_tag="MOX77_002639"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006683663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HCA3358129.1"
                     /translation="MIPLTHGLILAAILFVLGLTGLVIRRNLLFMLIGLEIMINASAL
                     AFVVAGSYWGQTDGQVMYILAISLAAAEASIGLALLLQLHRRRQNLNIDSVSEMRG"
     gene            complement(980..1534)
                     /gene="nuoJ"
                     /locus_tag="MOX77_002640"
     CDS             complement(980..1534)
                     /gene="nuoJ"
                     /locus_tag="MOX77_002640"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HCA3358130.1"
                     /translation="MEFAFYICGLIAILATLRVITHTNPVHALLYLVISLLAISGVFF
                     SLGAYFAGALEIIVYAGAIMVLFVFVVMMLNLGGSEIEQERQWLKPQVWIGPAVLSAI
                     MLAVIVYAILGVNDQGIDGTPISAKAVGITLFGPYVLAVELASMLLLAGLVVAFHVGR
                     EERAGEVLSNRADDRAKRKTEERA"
     gene            complement(1545..2087)
                     /gene="nuoI"
                     /locus_tag="MOX77_002641"
     CDS             complement(1545..2087)
                     /gene="nuoI"
                     /locus_tag="MOX77_002641"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015959823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HCA3358131.1"
                     /translation="MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRY
                     RGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFC
                     GLCEEACPTTAIQLTPDFELGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDG
                     KDKGEAENEAKPIDVKSLLP"
     gene            complement(2102..3079)
                     /gene="nuoH"
                     /locus_tag="MOX77_002642"
     CDS             complement(2102..3079)
                     /gene="nuoH"
                     /locus_tag="MOX77_002642"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015875065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HCA3358132.1"
                     /translation="MSWITPDLIEILLSILKAVVILLVVVTCGAFMSFGERRLLGLFQ
                     NRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLSFAIVP
                     VSPNWVVADLNIGILFSLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTVSYEVFL
                     GLSLMGVVAQAGSFNMTDIVNNQAHLWNVIPQFFGFVTFAIAGVAVCHRHPFDQPEAE
                     QELADGYHIEYSGMKFGLFFVGEYIGIVTVSALMVTLFFGGWHGPFLPPFVWFALKTA
                     FFMMMFILIRASLPRPRYDQVMSFGWKVCLPLTLINLLVTAAVILWQAQ"
     gene            complement(3076..5802)
                     /gene="nuoG"
                     /locus_tag="MOX77_002643"
     CDS             complement(3076..5802)
                     /gene="nuoG"
                     /locus_tag="MOX77_002643"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311194.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoG"
                     /protein_id="HCA3358133.1"
                     /translation="MATIHVDGKEYEVNGADNLLQACLSLGLDIPYFCWHPALGSVGA
                     CRQCAVKQYQNAEDTRGRLVMSCMTPATDGTFISIDDEEAKQFRESVVEWLMTNHPHD
                     CPVCEEGGNCHLQDMTVMTGHSFRRYRFTKRTHRNQDLGPFISHEMNRCIACYRCVRY
                     YKDYADGTDLGVYGAHDNVYFGRPEDGTLESEFSGNLVEICPTGVFTDKTHSERYNRK
                     WDMQFAPSICQQCSIGCNISPGERYGELRRIENRYNGTVNHYFLCDRGRFGYGYVNLK
                     DRPRQPVQRRGDDFITLNAEQAMQGAADILRQSKKVIGIGSPRASIESNFALRELVGA
                     ENFYTGIARGEQERLQLALKVLREGGIYTPALREIESYDAVLVLGEDVTQTGARVALA
                     VRQAVKGKAREMAAAQKVADWQIAAILNIGQRAKHPLFVTNVDDTRLDDIAAWTYRAP
                     VEDQARLGFAIAHALDNTAPAVDGIDSDLQNKIDVIVQALAGAKKPLIISGTNAGSSE
                     VIQAAANVAKALKGRGADVGIIMIARSVNSMGLGMMGGGSLDDALGELETGSADAVVV
                     LENDLHRHASATRVNAALAKAPLVMVVDHQRTAIMENAHLVLSAASFAESDGTVINNE
                     GRAQRFFQVYDPAYYDNKTIMLESWRWLHSLHSTVENREVDWTQLDHVIDAVIAAMPQ
                     FAGIKDAAPDATFRIRGQKLAREPHRYSGRTAMRANISVHEPRQPQDKDTMFAFSMEG
                     NNQPTAPRSEIPFAWAPGWNSPQAWNKFQDEVGGKLRHGDPGVRLIEATEGGLDYFTT
                     VPASFQAQDGQWRIAPYYHLFGSDELSQRSPVFQSRMPQPYIKLNPADAAKLGVNAGT
                     RVSFSYDGNTVTLPVEISEGLAAGQVGLPMGMPGIAPVLAGARLEDLREAQQ"
     gene            complement(5833..7170)
                     /gene="nuoF"
                     /locus_tag="MOX77_002644"
     CDS             complement(5833..7170)
                     /gene="nuoF"
                     /locus_tag="MOX77_002644"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoF"
                     /protein_id="HCA3358134.1"
                     /translation="MKNVIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTG
                     LSPDEIVSQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDR
                     LLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVHLRRAIAEATEAGLLGKNI
                     MGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGVWGKPTCVNN
                     VETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTIAREILED
                     YAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEIG
                     MVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLG
                     PGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHLINGIQPNLLKERW"
     gene            complement(7167..7667)
                     /gene="nuoE"
                     /locus_tag="MOX77_002645"
     CDS             complement(7167..7667)
                     /gene="nuoE"
                     /locus_tag="MOX77_002645"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoE"
                     /protein_id="HCA3358135.1"
                     /translation="MHENQQPQTEAFELSAAEREAIEHEKHHYEDPRAASIEALKIVQ
                     KQRGWVPDGAIYAIADVLGIPASDVEGVATFYSQIFRQPVGRHVIRYCDSVVCHITGY
                     QGIQAALEKNLNIKPGQTTFDGRFTLLPTCCLGNCDKGPNMMIDEDTHSHLTPEAIPE
                     LLERYK"
     gene            complement(7670..9472)
                     /gene="nuoC"
                     /locus_tag="MOX77_002646"
     CDS             complement(7670..9472)
                     /gene="nuoC"
                     /locus_tag="MOX77_002646"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C/D"
                     /protein_id="HCA3358136.1"
                     /translation="MVNNMTDLTAQDAAWSTRDHLDDPVIGELRNRFGPDAFTVQATR
                     TGIPVVWVKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHRDGLPAADFSVFYHL
                     ISIERNRDIMLKVALSENDLRVPTFTKLFPNANWYERETWEMFGIDIEGHPHLTRIMM
                     PQTWEGHPLRKDYPARATEFDPFELTKAKQDLEMEALTFKPEDWGMKRGTDNEDFMFL
                     NLGPNHPSAHGAFRIILQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIE
                     YLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMT
                     PVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLEWMPKRLD
                     SYEKAALRNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKWRPYSGYENF
                     DFEVPVGGGVSDCYTRVMLKVEELRQSLRILQQCLDNMPEGPFKADHPLTTPPPKERT
                     LQHIETLITHFLQVSWGPVMPAQESFQMVEATKGINSYYLTSDGSTMSYRTRVRTPSF
                     AHLQQIPSAIRGSLVSDLIVYLGSIDFVMSDVDR"
     gene            complement(9559..10221)
                     /gene="nuoB"
                     /locus_tag="MOX77_002647"
     CDS             complement(9559..10221)
                     /gene="nuoB"
                     /locus_tag="MOX77_002647"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoB"
                     /protein_id="HCA3358137.1"
                     /translation="MDYTLTRIDPNGENDRYPLQKQEIVTDPLEQEVNKNVFMGKLHD
                     MVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTC
                     FTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPP
                     RPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQPERERKRGERIAVTNLRTPD
                     EI"
     gene            complement(10237..10680)
                     /gene="nuoA"
                     /locus_tag="MOX77_002648"
     CDS             complement(10237..10680)
                     /gene="nuoA"
                     /locus_tag="MOX77_002648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoA"
                     /protein_id="HCA3358138.1"
                     /translation="MSMSTSTEVIAHHWAFAIFLIVAIGLCCLMLVGGWFLGGRARAR
                     HKNVPFESGIDSVGTARLRLSAKFYLVAMFFVIFDVEALYLFAWSTSIRESGWVGFVE
                     AAIFIFVLLAGLVYLARIGALDWTPARSRRERMNPETNSIANRQR"
     gene            complement(11073..11225)
                     /locus_tag="MOX77_002649"
     CDS             complement(11073..11225)
                     /locus_tag="MOX77_002649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358139.1"
                     /translation="MPICTRLTAQIVKVAVNQPVAIRSSMWAKNNQNIHFMNLHVKKL
                     EKLLLF"
     gene            complement(11305..12243)
                     /gene="lrhA"
                     /locus_tag="MOX77_002650"
     CDS             complement(11305..12243)
                     /gene="lrhA"
                     /locus_tag="MOX77_002650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator LrhA"
                     /protein_id="HCA3358140.1"
                     /translation="MINANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQ
                     QMQRLEQLVGKELFARHGRNKLLSEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLT
                     IGASDESADTILPFLLSRISSVYPKLALDVRVKRNAYMVDMVKSQEVDLVVTTNQPHS
                     LDCLNLRTSPTHWYCAAEYVLQRGEPVPLVLLDDPSPFRDMVLETLNAAGIPWRLAYV
                     ASTLLAVRAAVKAGLGVTARPVEMMSPDLRVLGAADGLPPLLDTEYMLCRDPNSQNEL
                     AMVIFHAMESYQNPWHYNQFSAEGGDDPLMVEGGFE"
     gene            13175..14389
                     /gene="alaA"
                     /locus_tag="MOX77_002651"
     CDS             13175..14389
                     /gene="alaA"
                     /locus_tag="MOX77_002651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine transaminase AlaA"
                     /protein_id="HCA3358141.1"
                     /translation="MSPIEKSSKLENVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNPA
                     PFGFEAPDEILVDVIRNLPTAQGYCDSKGLYSARKAIMQHYQARGMRDVTVEDIYIGN
                     GVSELIVQAMQALLNSGDEMLVPAPDYPLWTAAVSLSSGKAVHYLCDESSDWFPDLDD
                     IRAKITPRTRGIVIINPNNPTGAVYSKELLMEIVNIAREHNLIIFADEIYDKILYDDA
                     EHHSIAALAPDLLTITFNGLSKTYRVAGFRQGWMVLNGPKKHAKGYIEGLEMLASMRL
                     CANVPAQHAIQTALGGYQSISEFILPGGRLYEQRNRAWELINDIPGVSCVKPRGALYM
                     FPRIDAKRFNIHDDQKMVLDFLLQEKVLLVQGTAFNWPWPDHFRIVTLPREDDLEMAI
                     NRFGRFLSGYHQ"
     gene            14483..15082
                     /gene="yfbR"
                     /locus_tag="MOX77_002652"
     CDS             14483..15082
                     /gene="yfbR"
                     /locus_tag="MOX77_002652"
                     /EC_number="3.1.3.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-deoxynucleotidase"
                     /protein_id="HCA3358142.1"
                     /translation="MKQSHFFAHLSRMKLINRWPLMRNVRTENVSEHSLQVAMVAHAL
                     AAIKNRKFGGQLNAERIALLAMYHDASEVLTGDLPTPVKYFNSQIAQEYKAIEKIAQQ
                     KLVDMAPDELHDIFAPLIDENAWSKEEQAIVKQADALCAYLKCLEELSAGNNEFRLAK
                     TRLEKTLELRRSQEMDYFMAVFVPSFHLSLDEISQDSPL"
     gene            complement(15174..17000)
                     /locus_tag="MOX77_002653"
     CDS             complement(15174..17000)
                     /locus_tag="MOX77_002653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HCA3358143.1"
                     /translation="MNGELIWVLSLLAIAVVLFATGKVRMDAVALFVIVAFVLSGTLT
                     LSEAFSGFSDPNVILIAALFIIGDGLVRTGVATVVGTWLVKMAGSSEIKMLVLLMITV
                     AGLGAFMSSTGVVAIFIPVVLSVSMHMQTSPSRLMMPLSFAGLISGMMTLVATPPNLV
                     VNSELLREGLHGFNFFSVTPLGVVVLALGIVYMLVMRFMLKGDAPGQQAGKRRTFRDL
                     IREYRLTGRARRLAIRPGSPMVGQRLDDLKLRERYGANVIGVERWRRFRRVIVNVNGV
                     SEFRARDVLLIDMSAAEVDLREFCAEQLLEPMVLRGEYFSDQALDVGMAEISLIPKSE
                     LIGKSVREIAFRTRYGLNVVGLKRDGVALEGSLADEPLLMGDIILVVGNWKLISLLGQ
                     KGRDFVVLNMPVEVSEASPAHSQAPHAIFCLVLMVALMLTDEIPNPSAAIIACLLMGK
                     FRCIDAESAYKAIHWPSIILIVGMMPFALALQKTGGVSLVVQGLMDIGGGYGPYMMLG
                     CLFVLCAVIGLFISNTATAVLMAPIALAAAKSMGVSPYPFAMAVAMAASAAFMTPVSS
                     PVNTLVLGPGNYSFSDFVKLGVPFTLIVMAVCIVMIPMLFPF"
     gene            complement(17076..>17198)
                     /locus_tag="MOX77_002654"
     CDS             complement(17076..>17198)
                     /locus_tag="MOX77_002654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461276.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase"
                     /protein_id="HCA3358144.1"
                     /translation="AVNAPADTPRLADVDFALDSLTQLSVAKQPNGDVVVLRKT"
BASE COUNT         4194 a         4929 c         4362 g         3713 t
ORIGIN      
        1 accgaccgcg ccgcccagca gcatcagcgt cgcccacatc agcatgttgt tgccgtcagc
       61 aaagtgcgct ggcgccagct cgaccatttc gcggaagttc agcgtgccca gttcgttgta
      121 gaggatgaac agcgcgaagg cgaggaatac gtcaccgaca cgggtcacca cgaaggcttt
      181 cattgccgcc gcgccattct tcggatcgct gtaatagaag ccgatcaaca gataagagca
      241 caggcccacg ccttcccagc cgaggtacat caacagcagg ttatcggaca gcaccagaac
      301 aaccatgctg gcgataaaca ggttggtata agcgaagaag cgggagtagc cctcttctcc
      361 acgcatgtac caggaagcga acatgtggat caggaagccg acgccggtga ccacagagag
      421 catggtcagc gacaggccgt ccagcaccag gttaaaaccg atgttgaagt taccgaccga
      481 catccacgtc cacagcggct ggctgaacgc ctgtttgccg ttggcgaaga aatccatccc
      541 gacaaacgct gtcaccaacg ccgccagacc aacggagccc acgccaatgg tcgcggagag
      601 attttccgac cagcgtccgc gagagaacgc cagcagtaca aagccaatca atggcagaat
      661 aatggttaag gcaagcatgt tcatccacgc atctcactta ctgaatcgat gttcaggttc
      721 tggcgacggc gatggagttg cagcaacagc gcaagtccaa tactcgcttc cgcagccgca
      781 aggctgatgg cgagaatgta catcacctga ccatcggtct ggccccagta gctcccggcg
      841 accacaaagg ccagcgcgga ggcgttaatc atgatttcca gcccgatcag cataaacagc
      901 agattgcggc ggataaccag accggttaaa cccaggacga ataaaatcgc agcgaggatc
      961 agtccgtgtg ttaaggggat catgcgcgct cctccgtttt tcttttcgcg cggtcatcgg
     1021 cgcggttgct tagcacttcg cccgcacgct cttcacgacc gacgtggaac gccaccacca
     1081 ggcctgccag cagcagcata gacgccagtt cgaccgccag aacataaggc ccgaacagcg
     1141 taatgcccac cgctttcgcg ctaatcggcg tgccgtcgat gccctggtcg ttaacgccca
     1201 gaatggcgta cacaataacc gccagcataa tggccgacaa aaccgccgga ccaatccaca
     1261 cctgcggctt cagccactgg cgttcctgtt cgatttcgct gccgccgagg ttgagcatca
     1321 tcaccacgaa cacaaacagc accataatgg cacccgcgta gacgataatt tccagcgcac
     1381 cggcaaagta agcgcccagc gaaaagaaca ccccggaaat cgccagtagc gatatcacca
     1441 gatacaacag cgcgtgtacc ggattggtat gggtgatcac tcgcagggtc gcgaggatgg
     1501 ctatcaggcc acagatataa aaagcgaatt ccattgccct ctccttacgg taacaggctc
     1561 ttgacgtcga taggcttggc ttcgttctct gcttcgcctt tatctttgcc gtcgattgcc
     1621 atacccgcca tccggtagaa gttatattcc gggtatttgc ccggaccgga aatcagcaga
     1681 tcctcttttt cgtacaccag atcctgacgt ttgtattcgc ccagttcgaa gtccggggtc
     1741 aactgaatcg ccgtggtcgg gcacgcttct tcgcacaggc cgcagaagat gcagcgtgag
     1801 aagttaatgc ggaaaaattc cggataccag cggccatctt tggtctccgc tttttgcaga
     1861 gagatacagc ctaccggaca ggctaccgcg cacaggttac aggcaacgca gcgctcttca
     1921 ccgtccgggt cgcgcgtgag cacgatacgg ccacggtaac ggggcggtaa atagaccggc
     1981 tcttccggat acatccgcgt ttcgcgtttc gcgaacgcat gcaggccgat catccagata
     2041 ctgcgtacct gagtgccgaa acctactaat aattctttta aggtcatggt ctttgtgtcc
     2101 cttattgcgc ctgccacaga atgacagccg ccgttaccag caagttgatg agcgtcagcg
     2161 gcaggcaaac tttccagccg aaggacatta cctggtcata acgcggacgc ggtaacgacg
     2221 cacgaatcaa aatgaacatc atcatgaaga acgcggtttt cagcgcgaac cagacgaatg
     2281 gcggtaagaa cgggccatgc cagccaccga agaacaacgt taccatcagc gcggaaacgg
     2341 tgacgatgcc gatgtactcc cccacgaaga acagaccgaa tttcataccg gaatattcga
     2401 tgtggtaacc gtccgccagt tcctgctcgg cttccggctg gtcaaacggg tgacggtgac
     2461 agaccgctac gcccgcgatg gcgaaagtaa caaacccaaa gaattgcgga atcacgttcc
     2521 acagatgcgc ctggttattg acgatatcgg tcatattaaa tgaaccggcc tgcgccacca
     2581 cgcccatcag ggaaagacca aggaacactt cgtagctcac cgtctgggca gacgcgcgca
     2641 tcgcgcccag cagcgagtat ttgttgttgc tcgaccaacc ggcgaacagt accgcgtaaa
     2701 ccgccagacc ggccatcatc agggagaaca aaatcccgat gtttaaatcg gccaccaccc
     2761 agttagggct aaccggcaca atggcgaagg agagcagcag cgaagtaaac gcgatcatcg
     2821 gcgccagggt aaagatgacg cgatccgaga atttcgggat ccagtcttct ttaaagaaca
     2881 tcttgatcat atccgcgacc agctggagcg agccgcccca gccaacgcgg tttggtccat
     2941 aacggttctg gaacagaccc agcagacgac gttcgccaaa gctcatgaag gccccgcagg
     3001 tgacgaccac cagcagaatc accaccgctt tgagaatgct cagcaggatc tcaatcagat
     3061 ccggtgtaat ccaactcatt gttgcgcctc ccgcagatcc tcaagacgcg cgccagccag
     3121 aaccggcgcg atgccaggca tacccatcgg cagccctacc tgccctgccg ctaacccttc
     3181 agagatttca accggcagcg tcaccgtatt gccatcgtag ctaaaggaga cgcgagtccc
     3241 ggcattgacg cccaacttcg cagcatccgc cgggttaagt ttgatatacg gctgcggcat
     3301 acggctctgg aagaccggag aacgctgaga caattcgtcg ctgccaaaca ggtggtaata
     3361 cggcgcaata cgccactgac cgtcctgcgc ctggaagctt gccggcacgg tagtgaaata
     3421 atccagaccg ccctcagtcg cttcaatcaa acgcacgccc ggatcgccgt gacgcagttt
     3481 gccgcccact tcatcctgga atttgttcca cgcctgcgga gagttccagc ccggcgccca
     3541 ggcgaacgga atttcagatc gcggggcagt cggttggtta ttcccttcca ttgagaaggc
     3601 gaacatggtg tctttatcct gcggctgacg tggttcatgc acgctgatat tggcgcgcat
     3661 cgccgtacga ccgctgtaac gatgcggttc gcgcgccagc ttctgcccac gaatgcggaa
     3721 ggtcgcatcc ggcgcggcgt ccttaatgcc ggcaaattgc ggcatggcgg caatgaccgc
     3781 gtcgatcaca tggtcaagct gtgtccagtc cacttcgcgg ttttcgacgg tgctgtgcag
     3841 cgaatgcagc cagcgccagc tttccagcat aatcgtcttg ttatcgtagt aggccgggtc
     3901 ataaacctgg aagaagcgct gcgcgcggcc ttcgttgttg atgaccgtac catcgctttc
     3961 ggcgaagctt gccgcggaaa gcaccagatg agcattttcc ataatcgccg tgcgctgatg
     4021 gtcaaccacc atcaccagcg gcgctttggc gagcgcggcg ttcacgcgcg tagcgcttgc
     4081 atgacggtgg agatcgtttt ccagcaccac caccgcgtcc gcgctgccgg tttccagctc
     4141 gcccaacgca tcgtcaagcg aaccgccgcc catcataccc agccccatgc tgttcacgga
     4201 gcgggcaatc ataataatac cgacgtcggc gccacggcct ttcagcgctt tcgccacgtt
     4261 ggcggccgcc tgaatcacct cactgctacc ggcgttagtg ccggagataa tcagcggttt
     4321 tttcgcgccg gccaacgcct gcacaatgac atcaattttg ttttgcaagt cgctgtcgat
     4381 accgtcaacc gcaggcgctg tattgtccag cgcatgggca atcgcaaagc ccaggcgcgc
     4441 ctgatcttcc accggcgcgc gataagtcca ggcggcgata tcatccagac gggtgtcgtc
     4501 cacgttagtc acgaacagcg gatgtttggc acgctggccg atgttaagga tggccgcaat
     4561 ctgccagtcg gccactttct gcgccgccgc catttcacgc gctttacctt tcaccgcctg
     4621 gcgtaccgcc agcgcaacgc gcgcgccggt ctgagtgaca tcctcaccca agaccagtac
     4681 cgcgtcataa gattcgatct cccgcagcgc cggggtgtaa attccgcctt cacgcagcac
     4741 tttcagcgcc agttgcagac gttcctgctc gccgcgcgcg ataccggtgt agaagttttc
     4801 cgcaccaacc agctcacgca gcgcaaagtt gctctcaatg ctggcgcgtg gcgaaccgat
     4861 accgatcact ttcttcgact ggcgcagaat atccgccgcg ccctgcatcg cctgctcggc
     4921 gttgagagta ataaagtcat cgccacgacg ctgaaccggc tgacgcgggc ggtctttcag
     4981 gttcacatag ccatagccga aacgaccgcg gtcgcagagg aagtaatggt taacggtacc
     5041 gttgtaacgg ttttcgatac ggcgcagttc gccatagcgc tcgcccgggc tgatgttaca
     5101 gccgatggaa cactgctggc agatgctcgg cgcaaactgc atgtcccatt tacggttgta
     5161 acgctcggag tgcgttttat cggtgaagac gccggtcggg caaatctcga ccaggttacc
     5221 ggagaattcg ctttccagcg taccgtcttc cggacgcccg aagtagacgt tgtcatgcgc
     5281 gccatagacg cccagatcgg taccgtcagc ataatctttg tagtaacgta cacaacggta
     5341 gcaggcgatg cagcggttca tttcgtgcga gatgaacggc cccagatcct ggttgcggtg
     5401 ggtacgtttg gtgaaacggt agcggcggaa actgtgaccc gtcatcacgg tcatatcctg
     5461 aagatggcag ttaccgccct cttcacagac cggacagtcg tgcgggtggt tagtcatcag
     5521 ccactccacc acgctttcac ggaactgttt cgcttcttcg tcgtcaatag agataaaggt
     5581 accgtcggtg gctggcgtca tacaggacat caccaggcga ccacgcgtat cttccgcgtt
     5641 ttggtattgc ttcaccgcac actggcggca agcaccgacg cttcccagcg ccgggtgcca
     5701 gcaaaaatac ggaatatcaa ggccgaggga cagacatgcc tgtagcaggt tgtccgcgcc
     5761 gttgacctcg tattctttgc cgtctacatg aatcgtagcc attagcatgc ttccaaatta
     5821 aaaatcgtta actcaccagc gctctttgag caggttcggc tgaataccat tgattaaatg
     5881 ggtattactg aacggctgct tgatgccagc ttcgaattct tcgcggaaat acttaattgc
     5941 gctttgcagt ggctcaaccg cgcccggcgc atgcgcgcag aaggttttac ccggcccgag
     6001 gaatcgacac agttgctcaa gcgtctcgat atcccccggc tggccttcgc cacgctccag
     6061 cgcgcgcaga attttcacgc tccacggcaa cccgtcgcgg catggcgtac accagccgca
     6121 ggattcgcgg gcaaagaact cttccaggtt acgcaccagc gacaccatgc cgatttcgtg
     6181 gtctaccgcc atcgccagcg cggtgcccag acggctcccc gctttaccga tgctttcgaa
     6241 ttccatcggc agatcgaggt gtgcttcggt caggaagtct gtccccgcgc cgcccggttg
     6301 ccaggctttg aatttcaggc cgtcacgcat accgccggcg tagtcttcga ggatctcgcg
     6361 cgcgatggtg ccgaacggta attcccacag gcccggattc ttcacgcggc ccgagaagcc
     6421 catcagcttg gtacccgcat ctttgctttt cgagatgttc tggtaccact ccacgccgtt
     6481 ggcgaggatt gccgggacgt tacacaacgt ttcgacgtta ttcacacagg tcggcttgcc
     6541 ccatacgccg gaggtcgccg ggaaaggcgg cttggagcgc gggttcgcgc ggcggccttc
     6601 gagggagtta atcagcgccg tttcttcacc acagatgtaa cgccctgccc cggtgtggac
     6661 aaacagttcg aagtcgaacc cggtgcccat gatatttttg ccaagcagcc cggcctcggt
     6721 tgcttcggca atcgcacggc gcagatgtac agccgcttcg atatattcgc cgcgcaggaa
     6781 gatgtaacca cgatacgctt tcagcgcgaa cgcggagatc agcatgcctt ccaccagcag
     6841 gtgcggcagt tgttccatca gcagacggtc tttataggtg cccggctcca tttcatcggc
     6901 gttacacagc aggtaacgga tgttcatgga ttcatctttc ggcatcaggc tccacttcag
     6961 accggtggaa aagcccgcgc cgccgcgccc tttcagacca gcgtctttta cctggctgac
     7021 gatttcatcc ggagacaggc cggtcagcgc cttacgcgcg ccttcgtagc cgtttttgct
     7081 acgatattca tccagccaga ccggctgttt gtcatcgcgc agacgccagg tcagcggatg
     7141 ggtttcggga gtacggataa cgtttttcat ttataccgct ccagtagttc aggaatggct
     7201 tccggggtca gatggctgtg agtatcctca tcaatcatca tgttcggccc tttatcgcaa
     7261 ttccccaggc agcaggtcgg cagcagcgta aagcggccat caaaggtcgt ctgccccggt
     7321 ttgatgttga gatttttttc cagcgcggcc tgaatcccct gatagccggt gatatggcac
     7381 accacgctgt cgcagtagcg aatcacgtgg cgaccgaccg gctgacggaa gatctggctg
     7441 tagaatgtgg cgacgccttc gacgtcgctc gccggaatac ccagcacatc ggcaatagcg
     7501 tagatcgcgc cgtccggcac ccagccacgc tgcttctgaa cgattttcag cgcttcaatg
     7561 gacgccgcac gcgggtcttc gtagtggtgc ttctcgtgct ctatcgcttc acgctctgcc
     7621 gcactcagct caaaagcctc ggtttgtggt tgttgattct cgtgcataat tagcggtcca
     7681 catctgacat aacaaaatcg atactaccca gatagacaat caggtcggag accaggctac
     7741 cgcggatcgc cgagggaatc tgctgcaggt gcgcaaagct cggcgtgcgc acgcgggtac
     7801 ggtagctcat agtgctgccg tcgctggtca ggtagtaact gttaatcccc ttcgtcgctt
     7861 ccaccatctg gaaggactcc tgcgccggca tcaccgggcc ccaggagacc tgcaggaagt
     7921 gggtgatcag ggtttcgata tgttgcagcg tgcgctcttt cggcggcggc gtggtcagcg
     7981 ggtgatccgc tttgaacggc ccttccggca tgttatcgag gcactgctga agaatgcgca
     8041 gactctggcg cagctcttcc actttcagca tcacgcgggt atagcagtcg gaaacgccgc
     8101 cgcccaccgg cacttcaaag tcaaagtttt cgtagccaga atatggacgc catttacgca
     8161 cgtcgaagtc tatcccggtc gcgcgcagcc ctgcgccggt ggtgccccac tccagcgcct
     8221 ctttcgcgcc gtaagcggca acgccctgcg aacgcccttt cagaatggtg ttacgcagcg
     8281 cggctttctc gtaagagtcc agacgcttcg gcatccactc aaggaactct cgcagcaggc
     8341 gatcccaacc gcgcggcaag tcgtgcgcga cgccgccgat acggaaccag gccgggtgca
     8401 tacggaaacc ggtaatggct tccaccagat cataaatttt ctgccggtcg gtaaaggcaa
     8461 agaagaccgg ggtcatcgcg ccgacgtcct gaataaaggt cgaaatgtac agcagatgac
     8521 tgttaatgcg gaacagttcg gagagcatca cgcggatgac gttcacacga tccgggacgg
     8581 tgatccccgc cagtttttct accgccagca cgtacggcat ttcattgacg caaccaccga
     8641 ggtattcgat acggtcggta tagggaatgt agctatgcca ggactggcgc tcgcccattt
     8701 tttcggcgcc gcggtggtga tagccgatat ccggcacgca gtcgacgatt tcttcgccgt
     8761 caagttgcag gataatacga aacgcaccgt gcgcagacgg gtggttcggg ccgaggttga
     8821 ggaacataaa gtcctcgttg tcagtcccgc gcttcatccc ccagtcttcc ggcttaaagg
     8881 tcaacgcttc catctccaga tcctgcttgg ctttggtcag ctcaaacggg tcgaattcgg
     8941 tcgcgcgcgc cggataatct ttacgcagcg gatggccttc ccaggtttgc ggcatcatga
     9001 tgcgcgtcag gtgcgggtgg ccttcgatat caatgccaaa catctcccag gtctcacgct
     9061 cgtaccagtt ggcgttaggg aaaagtttag tgaaggtcgg cacgcgcagg tcgttttcag
     9121 acaacgccac cttgagcata atatcgcgat tacgctcaat ggaaatcagg tggtagaaaa
     9181 cggaaaaatc cgcggcgggt aacccgtcac ggtgcgtacg caggcgttca tccatgccgt
     9241 gtaagtcaaa cagcatgacg taaggtttcg gcagtttctt taagaaatcg ccaacctcca
     9301 gtagttgttc acgcttgacc caaacaacgg ggataccggt gcgggtcgcc tgaacggtaa
     9361 aggcatccgg cccaaaacgg ttgcgcagtt cgccgataac cggatcatca agatgatcgc
     9421 gggtactcca tgcagcgtct tgcgcggtta agtcggtcat attgttcacc attgcaaatg
     9481 gtccgtggtg gtcggcagtg cttcgcgcta ttaaaatagt ggttagcgaa gtgaagtgct
     9541 gctgccgaca ggcgcaaatt aaatctcgtc cggggtacgc aggttcgtga cggcaatacg
     9601 ctcgccgcgt ttacgttcgc gttctggctg catattggcg cgatacacgc cctgatcgcc
     9661 caccacccat gagagcggac ggcgctcttt gccaatcgat tcttgcagca gcatcaacgc
     9721 ttgcatatac gcttccggac gcggcggaca gccagggata tacacatcca ccgggataaa
     9781 cttatcaacg ccctgcacta ccgaataaat atcgtacatg ccgccggagt tggcgcaggc
     9841 gcccatagaa atgacccatt ttggctccag catttggtca tacagacgct gaataaccgg
     9901 agccattttg gtaaagcagg taccggccac caccatcaga tcagcctgac gtggcgacgc
     9961 acgcagcact tccgcgccga aacgggcaac gtcatgcact gcggtaaacg aggtcaccat
    10021 ctctacatag cagcaagaaa ggccgaagtt gtagggccaa attgagtttt tacggcccca
    10081 gttaaccatg tcatgcagtt tgcccatgaa cacgtttttg ttaacttcct gctccagggg
    10141 gtcggttacg atctcctgtt tttgcagggg gtaacggtca ttctcaccgt taggatctat
    10201 gcgggtgagc gtataatcca tcttaatgcc tcgcggttag cgttgacgat tagcgatact
    10261 gttcgtttcc gggttcatac gctcgcggcg tgaacgcgcg ggcgtccagt ccaacgcgcc
    10321 aatacgcgcc agataaacca gaccagccag taacacaaaa ataaaaattg cagcttccac
    10381 aaagccaacc cagccgcttt cgcggataga agttgaccat gcgaacagat acagcgcttc
    10441 aacgtcgaag ataacgaaga acatggctac caggtaaaac ttggcagaca agcgtaagcg
    10501 ggcggtgccg accgagtcga tacctgattc aaacggaacg ttcttgtgcc tcgcgcgtgc
    10561 gcgaccgccc aaaaaccaac cgcctaccag catcaggcag cacaggccaa tggcaacgat
    10621 aagaaagata gcgaatgccc agtgatgagc gatgacttca gtggatgttg acatactcat
    10681 tgcttactca tcaaaagtag cgccagttcc tctgctcttt acggcagatg gacgccacat
    10741 cgattcaggg gaggaataaa aaaaccctac aattactgta gaaaatgata aaaacagcta
    10801 attgatgtgg ttttttactc ctttctataa ccttttgtca actttaacaa aagttccttc
    10861 acattaattt acatcaattc atcatcatta acattaagtg ccatcctgga gaaaatgact
    10921 cttcgaccag gggggatttt atgttgttga atcgtgtccg ttgtgaagca aaagaaataa
    10981 cacacaccta ttttgacagg aatttgtgaa gatgcctccc cctaaatggg agtattttct
    11041 tgatctgtga cacgcttttg ttaattcacc ccctaaaaca gcaacaattt ctctagtttt
    11101 ttaacatgca aattcataaa atggatgttc tggttatttt ttgcccacat tgaactgcga
    11161 atcgctactg gctgatttac cgcaactttt acaatttgtg cggttaagcg cgtacagatg
    11221 ggcacaaaaa aagagccact gagcgttttt tcatcgccag cggctctttt ttacatttac
    11281 gacttagcgc cttttgcctg cgagctactc aaaaccccct tccaccatca gcggatcatc
    11341 tccgccctct gcagaaaact ggttgtaatg ccatgggttt tgatagcttt ccatcgcatg
    11401 gaaaatcacc atcgccagct cgttctggct attgggatcg cggcacaaca tatattccgt
    11461 atccagcaaa ggcggtaatc catctgcggc gcccagcacg cgaaggtcgg gactcatcat
    11521 ttcgacaggt cgagccgtta cgccaagacc ggctttaacg gccgcgcgta ccgccagtaa
    11581 tgtagaggcc acataggcca gccgccaggg aatacccgct gcatttagcg tctccagcac
    11641 catatcgcgg aatgggctgg gatcgtccag caggactaat ggtacgggct ctcccctttg
    11701 caaaacatac tcagccgcac aataccaatg ggtgggcgag gtccgcaaat tcagacagtc
    11761 cagcgaatga ggttggttag tcgtcaccac caaatctact tcctgcgatt taaccatgtc
    11821 caccatatag gcgttgcgtt ttacccgtac atcaagcgcg agtttcggat aaaccgagct
    11881 gattcggcta agcaaaaaag gcaggatagt atcagctgat tcatcagaag cgccgattgt
    11941 taacactccc tgaagattac tgaacattaa tgatgaacac gcctcatcat taaaacgcag
    12001 gatttttctg gcgtacccca gaagctggat accgtgttcg ctcaaaagtt tgttacgacc
    12061 atggcgggcg aacaattcct ttcccacgag ttgctcaaga cgctgcattt gctgactgac
    12121 cgcagactga gtacgacata ccgccgccgc cgccgcggcg aaggtgttca gatcggcaac
    12181 ggccacgaac gttctcagca gatcgagatc gaggttaatt atcggacgat ttgcatttat
    12241 cataattttt cacttactga cgggtcatat cgggctgacc tggttaatgc tgtgcattca
    12301 gaaacaagca attccatttg taatgtgcat ccttcgcagt accgcctggt tacccaggta
    12361 aatgttagaa tgtaattgaa aatacgacca aaacacttct cttacttact gatataatac
    12421 caaatgcaac tgatcgggat atatcaaaga gaatgtgtca tacctttagg cgtctacaga
    12481 tttctgctaa tgatggacgt gtaaatcttg taacagcgtc aaatagttta ccgagacgca
    12541 cagatacaaa aacaatatat tgaacaatag gttatgtata aaatcgcgtc atgataatta
    12601 gcagacaacg cagactacgc ccccgtttcg gatcattatc ttaacctaaa accgctatat
    12661 ttataagtat tattacgaat aatcttaacc tgggatatgt tatactaatc cgaccagaaa
    12721 gatattatta cgactttagt aaatgctttt taaatattaa ataataatta attaagattt
    12781 ctaccattca ttaattatac ttaacaatag tttcacacca cccgccgccg gaaaggtcta
    12841 accttctcat tttaccttta atactcagta tttccgaaat agccgacgcg acactaatga
    12901 tgaatgctta tctctcataa aacagataat ttctgacaac ataaaaaacc acattacgcg
    12961 caaccacata gaacaaaaca ctatacatac agacaaaaat agaaaatgca tctaaccaaa
    13021 tgattttatg aagttttaaa cagtacgaaa gcgcgttaaa aataaacaaa atcttcttct
    13081 gttcactctt caaaactcac cgtcgtggga gtacattgtt tcgtgctgac ttccacggca
    13141 gggagtggca ataacagcta aaaggtcaag attcatgtcc cccattgaaa aatccagcaa
    13201 actcgaaaat gtctgttatg acattcgtgg ccccgttctg aaagaagcga aacgccttga
    13261 ggaagaaggt aataaagttc ttaaactgaa tatcggcaac cccgccccct tcggattcga
    13321 agcgccggac gaaattctgg tcgatgtcat tcgtaatttg ccgacggcgc aaggatattg
    13381 cgactcgaaa gggctttatt ccgcccgtaa agcgattatg cagcattatc aggcccgtgg
    13441 aatgcgcgat gtaaccgtgg aagatatcta tatcggtaac ggcgtttccg agctgatcgt
    13501 tcaggcgatg caggcgttgc ttaacagtgg cgatgaaatg ctggttcccg cgcccgatta
    13561 tccgttatgg acagcagcgg tatcgctctc cagcggcaag gcggtacatt atctttgcga
    13621 tgaatcttcc gactggttcc cggaccttga cgatatccgc gccaaaatca ccccacgtac
    13681 gcgtggtatt gtcattatta atccaaacaa ccctactggc gccgtctatt ctaaagaatt
    13741 gttgatggaa attgtcaaca ttgcgcgcga gcataatctc atcatcttcg ccgatgaaat
    13801 ttatgacaag attctctatg acgatgccga acatcactct atcgccgcac tggcgcctga
    13861 tctgctgacc atcaccttta atggtttgtc taaaacctat cgcgtcgccg gcttccgcca
    13921 gggctggatg gtgctgaacg ggccgaaaaa acatgcgaaa ggctatattg aagggctgga
    13981 gatgttagcc tcaatgcgcc tgtgcgccaa cgtcccggcg caacatgcta ttcagaccgc
    14041 gctcggcggc tatcaaagca ttagcgaatt tattctgccg ggcggtcgac tgtatgaaca
    14101 gcgtaaccgc gcctgggagt tgattaacga tattcccggc gtttcctgcg taaaaccgcg
    14161 cggcgcgttg tacatgttcc ccaggatcga cgctaaacgt tttaatattc acgacgacca
    14221 gaagatggtg ctggacttcc tgctacagga aaaggtgctg ctggtgcaag gtaccgcctt
    14281 taactggccg tggccggatc acttccgcat tgtgacgcta ccgcgtgaag atgacctgga
    14341 gatggccatc aaccgctttg ggcgtttcct ctcaggctac catcaataat cttaaattca
    14401 ggctacttcg gtagcctgaa ttgcatcttc atcaccctcc ccgcacaatg aagtctgccg
    14461 cagtgaaaac aaaaggtaat ctatgaagca gagccatttt ttcgcccatc tctcccgcat
    14521 gaagttgatt aaccgctggc cgctgatgcg taacgtgcgt acggaaaacg tctccgaaca
    14581 tagtctgcag gtggcgatgg tcgcccatgc gttggcggcg ataaaaaacc gtaaatttgg
    14641 cggccagctc aatgctgaac gcatcgcgct tctggcgatg tatcatgatg cctcggaagt
    14701 actgaccggc gatctgccaa cgccggtaaa atattttaat tcccagatag ctcaggaata
    14761 taaagcgatc gaaaaaatcg cccagcaaaa gctggttgat atggcgccgg atgaattaca
    14821 cgatattttc gcaccgctta ttgatgagaa tgcctggagc aaagaagaac aggcaatcgt
    14881 aaagcaggcc gatgcgcttt gcgcctacct gaaatgcctg gaggagctct cagcgggaaa
    14941 taatgagttt agactggcaa aaacgcggct ggaaaaaacg ctggaattac gtcgcagcca
    15001 ggagatggac tattttatgg cggtgttcgt gccaagtttc catctctctc ttgacgagat
    15061 aagccaggat tcaccgcttt agttgccgga tggcggctaa cgccttatcc ggcctaccgt
    15121 tcttcccgta ggcctgataa gcgtagcgcc atcaggcctt ttccagcctg gggttaaaac
    15181 ggaaacaaca tcggaatcat cacaatacaa accgccatca caataagcgt gaacggcacg
    15241 ccaagcttca caaaatcgct aaagctatag tttcccggcc ccagaaccag agtattgacc
    15301 ggcgatgaaa ccggcgtcat aaaggcggcg gatgccgcca tcgctactgc catcgcaaac
    15361 ggatagggcg acacccccat cgatttcgcc gccgccagcg caatcggcgc catcagcacc
    15421 gccgttgccg tgttagaaat gaacagtcct atgacggcgc acagcacgaa caggcatccc
    15481 agcatcatat acggcccata gccgccgccg atatccatta acccttgcac gaccagagag
    15541 acgccgccgg ttttttgcaa cgccagcgca aacggcatca tacccacaat caagataata
    15601 ctcggccagt ggatcgcttt atacgcgctt tcagcatcaa tacagcgaaa tttccccatc
    15661 agcaggcagg cgataatcgc cgcgctcgga ttgggaattt catcggtcaa catcagcgcc
    15721 accatcagta ccaggcagaa aatggcgtgc ggcgcctggc tgtgcgccgg cgaggcttcg
    15781 ctgacctcga ccggcatatt cagcaccaca aagtcgcggc ctttttgccc cagcaggctg
    15841 attaacttcc agttccccac gaccagaatg atatcgccca tcaataacgg ttcatcggcc
    15901 agcgaccctt ccagcgcgac gccgtcgcgt ttcaggccga ccacattcag cccgtaacgt
    15961 gtacggaagg cgatttcacg caccgacttg cctatcagtt cagacttcgg aataagcgaa
    16021 atttccgcca tgccaacatc caacgcctga tcggaaaaat attctccacg caataccatc
    16081 ggttccagca gttgctcggc gcagaactct ctgaggtcaa cctccgccgc cgacatatca
    16141 atcagcagaa cgtcgcgagc gcgaaactcc gatacgccgt tcacattgac gataacccgc
    16201 cgaaagcgcc gccagcgttc aacgccgatg acattggcgc cgtaacgttc gcgcagttta
    16261 aggtcgtcca gccgctgtcc caccatcggc gaaccggggc gaatcgccag acgacgcgcg
    16321 cgccccgtca gacggtactc gcggataaga tcgcggaaag tgcgacgctt accggcctgt
    16381 tgtccgggcg catcgccttt tagcatgaag cgcatcacca gcatataaac aatgccgagc
    16441 gccaacacca ctacccccag cggcgtcacg ctaaaaaagt tgaacccgtg caggccttca
    16501 cgcagcagtt cactgttaac caccaggttc ggcggcgtcg ccaccagcgt catcattccg
    16561 ctgataagcc cggcaaaact cagcggcatc atcaggcgcg aaggcgaggt ctgcatatgc
    16621 atagaaacgc taagaacaac ggggataaaa atcgccacca cgccggttga actcatgaaa
    16681 gcaccaagtc cggcgacggt gatcatcagt aaaaccagca tcttgatttc actgctgccc
    16741 gccattttaa ccagccaggt accgaccacc gtcgcaacgc cggtgcgcac gaggccgtcg
    16801 ccaataataa ataaggcggc gataagaatg acattcggat cgctaaagcc ggagaaggct
    16861 tccgaaaggg tcaaggtacc gctaaggaca aaagcaacaa tgacgaataa agccaccgca
    16921 tccatacgta ctttgcccgt cgcaaacaac acgacggcaa tcgccagtaa agagagaacc
    16981 caaatcaatt caccgttcac aacatatcct tgtcagatga gaagataacg tgattctgcc
    17041 ataaatatgc cccgccaggg cggggcatat catgatcagg tctttcttaa caccaccaca
    17101 tcgccgtttg gttgtttagc gaccgataat tgcgtcaggc tatccaacgc aaaatcaaca
    17161 tccgccagac gcggcgtgtc ggccggcgca ttgaccgc
//
LOCUS       DAGWFR010000078        17177 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.079, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000078 DAGWFR010000000
VERSION     DAGWFR010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 17177)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17177)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17177
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.079"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..943)
                     /locus_tag="MOX77_002655"
     CDS             complement(<1..943)
                     /locus_tag="MOX77_002655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK 4TM domain-containing
                     protein"
                     /protein_id="HCA3358145.1"
                     /translation="MSQEYTEDKDVTLTKLSSGRRLLEALLILIALFAVWLMAALLSF
                     NPSDPSWSQTAWHEPIHNLGGAPGAWLADTLFFIFGVMAYTIPVIIVGGCWFAWRHQS
                     TDDYIDYFAVSLRLIGVLALILTSCGLAAINADDIWYFASGGVIGSLLSTTLQPLLHS
                     SGGTIMLLCIWAAGLTLFTGWSWVSIAEKLGGWLLNILTFASNRTRRDDTWVDDEEYD
                     DEYDEETDGVQRESRRARILRGALARRKRLAEKFSNPRGRQTDAALFSGKRMDDDEDI
                     QYSARGVAADPDDVLFSGNRATQSEYDEYDPLLNGHSV"
     gene            complement(1078..1572)
                     /gene="lrp"
                     /locus_tag="MOX77_002656"
     CDS             complement(1078..1572)
                     /gene="lrp"
                     /locus_tag="MOX77_002656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001591745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine-responsive transcriptional regulator
                     Lrp"
                     /protein_id="HCA3358146.1"
                     /translation="MVDSKKRPGKDLDRIDRNILNELQKDGRISNVELSKRVGLSPTP
                     CLERVRRLERQGFIQGYTALLNPHYLDASLLVFVEITLNRGAPDVFEQFNAAVKKLEE
                     IQECHLVSGDFDYLLKTRVPDMSAYRKLLGETLLRLPGVNDTRTYVVMEEVKQSNRLV
                     IKTR"
     gene            2119..3087
                     /gene="trxB"
                     /locus_tag="MOX77_002657"
     CDS             2119..3087
                     /gene="trxB"
                     /locus_tag="MOX77_002657"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HCA3358147.1"
                     /translation="MGTTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQL
                     TTTTEVENWPGDPNDLTGPLLMERMHEHAAKFETEIIFDHINNVDLQNRPFRLTGDSA
                     EYTCDALIIATGASARYLGLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVE
                     EALYLSNIASEVHLIHRRDGFRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGV
                     TGLRLRDTQQSDNIETLDIAGLFVAIGHSPNTALFEGQLELENGYIKVQSGTHGNATQ
                     TSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLDGLADASK"
     gene            3201..4967
                     /gene="cydD"
                     /locus_tag="MOX77_002658"
     CDS             3201..4967
                     /gene="cydD"
                     /locus_tag="MOX77_002658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine/glutathione ABC transporter
                     permease/ATP-binding protein CydD"
                     /protein_id="HCA3358148.1"
                     /translation="MNKTRQKELTRWLKQQSVISQRWLNISRLLGFMSGVLIVAQAWI
                     MARILQHMIMENIPREALLLPFILLILIFVLRAWVVWLRERVGFHAGQHIRFEIRRQV
                     LDRLQQAGPAWIQGKPAGSWATLVLEQIDDMHDYYARYLPQMALAVCVPLLIVAAIFP
                     SNWAAALILLGTAPLIPLFMAMVGMGAADANRRNFLALARLSGHFLDRLRGMETLRIF
                     GRGEAETESIRAASQDFRQRTMEVLRLAFLSSGVLEFFTSLSIALVAVYFGFSYLGEL
                     NFGHYGTGVTLAAGFLALILAPEFFQPLRDLGTFYHAKAQAVGAADSLKTFLETPLAH
                     PARGEVELAENEPVTIDAVNLIITSPEGKTLAGPLNFSLAAGERAVLVGRSGSGKSSL
                     LNVLSGFLSYQGSLRINGVELRDLSPESWRQHLSWVGQNPQLPAATLRENVLLARPDA
                     SEQELYAALDAAWVSEFLPLLPQGVDTPLGNHASRLSVGQAQRVAVARALLNPSQLLL
                     LDEPAASLDAHSEQRVMQALKAASKRQTTLMVTHQLEDLADWDAIWVMQDGAIVEQGS
                     YAELSAANGAFATLLAHRQEDI"
     gene            4968..6689
                     /gene="cydC"
                     /locus_tag="MOX77_002659"
     CDS             4968..6689
                     /gene="cydC"
                     /locus_tag="MOX77_002659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine/glutathione ABC transporter ATP-binding
                     protein/permease CydC"
                     /protein_id="HCA3358149.1"
                     /translation="MRALLPYLTLYKRHKWMLTLGIALAILTLLASIGLLTLSGWFLS
                     ASAIAGFAGIYSFNYMLPAAGVRGAAITRTAGRYFERLVSHDATFRVLQHLRIYTFSK
                     LLPLSPAGLARYQQGELLNRIVADVDTLDHLYLRVISPLVGAFVVIMIVTLGLSVLDV
                     TLAITLGGIMLLTLFIMPPVFYRAGKNTSQNLTHLRGQYRQQLTSWLQGQAELTIFGA
                     SKRYRAQMEATELQWHEAQRRQSELTALSQALMLLIGALAVMLMLWMASGGVGGNMQP
                     GALIALFVFCALAAFEALAPVTGAFQHLGQVIASALRITELTEQKPEVTFPQAETPAP
                     EKVTLTLRDVSFRYPDQPINALNALSLQANPGEHVAILGRTGCGKSTLLQLLTRAWDP
                     QQGEILLNDLPLSSLSESALRRTISVVPQRVHLFSATLRDNLLLAAPNASDEALSDML
                     RRVGLENLLEDSGLNSWLGEGGRLLSGGELRRLAIARALLHDAPLMLLDEPTEGLDAT
                     TESEMLELLADVMREKTVLIVTHRLRGLARFDQIIVMDDGRIIERGTHAELLAGQGRY
                     YQFKQRL"
     gene            6734..7438
                     /gene="aat"
                     /locus_tag="MOX77_002660"
     CDS             6734..7438
                     /gene="aat"
                     /locus_tag="MOX77_002660"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HCA3358150.1"
                     /translation="MRLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQH
                     GIFPWFSPGDPILWWSPDPRAVLWPEKFHLSRSMKRFHNASPYRVTLNYAFDRVIDGC
                     ANHRDEGTWITRGIEEAYRRLHELGHAHSIEVWRDRELVGGMYGVSQGALFCGESMFS
                     RQENASKTALLVFCAEFTRHGGKLIDCQVLNSHTASLGAIEIPRRDYLDHLAALRQQP
                     LASRFWVPRTLFLPRK"
     gene            7439..7822
                     /locus_tag="MOX77_002661"
     CDS             7439..7822
                     /locus_tag="MOX77_002661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358151.1"
                     /translation="MFSAHFLLGCYNCCRRIGLAHYHAARCQVTPIVYFTVPLYVALM
                     SIHQAVVSGKRCITRRCRVSRNHVLNLVCCVLNAQIFTYQKKFGIILPVQIMVVIPQR
                     IRWPKKTILKCKVPFSKRYLIPCSA"
     gene            7750..7968
                     /gene="infA"
                     /locus_tag="MOX77_002662"
     CDS             7750..7968
                     /gene="infA"
                     /locus_tag="MOX77_002662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001040186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HCA3358152.1"
                     /translation="MAKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNY
                     IRILTGDKVTVELTPYDLSKGRIVFRSR"
     gene            complement(8059..8970)
                     /locus_tag="MOX77_002663"
     CDS             complement(8059..8970)
                     /locus_tag="MOX77_002663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCA3358153.1"
                     /translation="MIKTDLNDFAWFVHVVEEGGFAAAGRALDEPKSKLSRRIAQLEE
                     RLGVRLIQRTTRQFNVTEVGQTFYEHCKAMLVEAQAAQDAIAALQVEPRGIVKLTCPV
                     TLLHVHIGPMLAKFMARYPDVSLQLEATNRRVDVVGEGVDVAIRVRPRPFEDSDLVMR
                     VLADRGHRLFASPDLIARMGIPSAPAELSHWPGLSLASGKHIHRWELYGPQGARAEVH
                     FTPRMITTDMLALREAAMAGVGLVQLPVLMVKEQLAAGELVAVLEEWEPRREVIHAVF
                     PSRRGLLPSVRALVDFLTEEYARMVEE"
     gene            9079..9939
                     /locus_tag="MOX77_002664"
     CDS             9079..9939
                     /locus_tag="MOX77_002664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HCA3358154.1"
                     /translation="MKQITGVYTAPRPHWVGDGFPVRSLFSYQSHAQQLNPFLLLDYA
                     GPHTFTPGNEKRGVGEHPHRGFETVTIVYSGEVEHRDSTGRGGVIGPGDVQWMSAGAG
                     ILHEEFHSDAFTRRGGELEMMQLWVNLPMKDKMTTPGYQSITHDVIPTVTLPDDAGVV
                     RVIAGRYEETKGPAHTFSPLNVWDMRLQRNRQLTLAQPEGWSAALVVLKGNITVNGTT
                     PANEAQLVVLSQQGKTLHLEASSDASVLLLSGEPLNEPIVGYGPFVMNTKQEIAEAVR
                     DFNSGRFGQI"
     gene            9959..10636
                     /locus_tag="MOX77_002665"
     CDS             9959..10636
                     /locus_tag="MOX77_002665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrolase"
                     /protein_id="HCA3358155.1"
                     /translation="MSSPASFNGLRPVIDVNDSVMLLIDHQSGLFQTVGDMPMPELRA
                     RAAALAKMATLAKMPVITTASVPQGPNGPLIPEIHANAPHAQYIARKGEINAWDNEDF
                     VKAVKATGRKTLIIAGTITSVCMAFPAISAVAEGYKVFAVIDASGTYSKMAQEITLAR
                     IVQAGVVPMDTAAVASELQGTWNREDAAAWADVYTQVFPAYQLLIESYSKAQDVVKNN
                     EMLDSQR"
     gene            10785..10872
                     /locus_tag="MOX77_002666"
     tRNA            10785..10872
                     /locus_tag="MOX77_002666"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10819..10821,aa:Ser,seq:gga)
     gene            11231..11608
                     /locus_tag="MOX77_002667"
     CDS             11231..11608
                     /locus_tag="MOX77_002667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001535855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
                     /protein_id="HCA3358156.1"
                     /translation="MHKYLSVVKKHRVPLSDAAVDLLKDLPRLKDNNHVFPAPRAETL
                     SDMSLLAVLKRMGYIDLTQHGFRSTFREWAGEATDYQREVIEHALAHQLADKAEAAYQ
                     RGTLWPKRVALMDDWTGYSTANS"
     gene            11770..11967
                     /locus_tag="MOX77_002668"
     CDS             11770..11967
                     /locus_tag="MOX77_002668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004111984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358157.1"
                     /translation="MPGLIGYWKQLPTKDEYIKKHNMSKISCYSCGHEKFSDVGLIQV
                     WDNHRRILCAKCKTTLFREED"
     gene            complement(12179..14455)
                     /gene="clpA"
                     /locus_tag="MOX77_002669"
     CDS             complement(12179..14455)
                     /gene="clpA"
                     /locus_tag="MOX77_002669"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpA"
                     /protein_id="HCA3358158.1"
                     /translation="MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREAL
                     EACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRSE
                     VTGANVLVAIFSEQESQAAYLLRKHEVSRLDIVNFISHGTRKDEPSQSSDLGNQPAGD
                     EQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGV
                     GKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ
                     DTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKD
                     RALARRFQKIDITEPSVEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDR
                     HLPDKAIDVIDEVGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLK
                     NLGDRLKMLVFGQDNAIEALTEAIKMSRAGLGHEHKPVGSFLFAGPTGVGKTEVTVQL
                     SKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEI
                     EKAHPDVFNLLLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDN
                     STDAMGEIKKVFTPEFRNRLDNIIWFDHLSGEVIHQVVDKFIVELQAQLDQKGVSLEV
                     SQEARDWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKN
                     ALTYDFQSAQKHKPEAAH"
     gene            complement(14486..14806)
                     /gene="clpS"
                     /locus_tag="MOX77_002670"
     CDS             complement(14486..14806)
                     /gene="clpS"
                     /locus_tag="MOX77_002670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005128368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adapter ClpS"
                     /protein_id="HCA3358159.1"
                     /translation="MGKTNDWLDFDQLVEDSVRDALKPPSMYKVILVNDDYTPMEFVI
                     DVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCT
                     LEKA"
     gene            15130..15351
                     /gene="cspD"
                     /locus_tag="MOX77_002671"
     CDS             15130..15351
                     /gene="cspD"
                     /locus_tag="MOX77_002671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock-like protein CspD"
                     /protein_id="HCA3358160.1"
                     /translation="METGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKA
                     GQSVRFDVHQGPKGNHASVIVPIEAEAVA"
     gene            complement(15481..>17177)
                     /gene="macB"
                     /locus_tag="MOX77_002672"
     CDS             complement(15481..>17177)
                     /gene="macB"
                     /locus_tag="MOX77_002672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="macrolide ABC transporter ATP-binding
                     protein/permease MacB"
                     /protein_id="HCA3358161.1"
                     /translation="REHFGFIFQRYHLLSHLTAAQNVEIPAVYAGIERKKRQARAREL
                     LLRLGLSDRVDYPPSQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAI
                     LRQLRDRGHTVIIVTHDPLIAAQAERIIEIHDGKIVHNPPAQEKKREQGVDAAVVNTA
                     PGWRQFASSFREALSMAWLAMAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLA
                     DIRAMGTNTIDIHPGKDFGDDNPQYRQALKYDDLVAIQKQPWVNSATPSVSKSLRLRY
                     GNIDIAVNANGVSGDYFNVYGMSFREGNTFNAVQQQDRAQVVVLDANTRRQLFPNKAN
                     VVGEVVLVGNMPVIVIGVAEEKPSMYGNSNLLQVWLPYSTMSDRIMGQSWLNSITVRV
                     KDGVDSDQAEQQLTRLLTLRHGKKDFFTWNMDSVLKTAEKTTYTLQLFLTLVAVISLV
                     VGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGISLSM
                     FIAFMLQLFLPGWEIGFSLTALASAFLCSTFTGILFGWLPARNAARLDPVDALARE"
BASE COUNT         3984 a         4772 c         4336 g         4085 t
ORIGIN      
        1 tgacagaatg gccgtttaac agcggatcat attcatcata ttccgactgc gtcgcacggt
       61 tgcccgaaaa cagaacgtcg tcgggatcgg cagcgacgcc gcgcgcgcta tactgaatgt
      121 cctcgtcatc atccatccgt ttgccggaaa agagcgcggc atcggtctga cggccccgtg
      181 gattgctgaa tttttcagcc agtcgcttac gacgcgccaa cgcgccgcgc aaaatacgcg
      241 cccggcgaga ttcacgctgc acgccatcgg tttcttcatc gtattcgtca tcatactctt
      301 cgtcgtcaac ccacgtatca tcacgccggg tacggttgct ggcgaaggtc agtatattaa
      361 gcagccagcc gcctaatttt tcggcgatac taacccagga ccagccggta aagagcgtca
      421 gcccggcagc ccaaatacag agaagcatta tcgttccgcc gctactatgc aacaacggct
      481 gcagcgtggt gcttaacagg ctgccaatta cgccgccgga ggcgaaatac cagatatcgt
      541 cggcattaat ggccgccaga ccgcaggaag tgagaatcag cgccagcacg ccaataaggc
      601 gtagcgacac agcaaaatag tcgatgtaat catccgtaga ctgatgacgc cacgcaaacc
      661 aacacccgcc gacaataatg acagggatag tgtaggccat tacgccaaaa ataaagaaca
      721 gtgtatcggc cagccacgcg cccggcgcgc cgcctaaatt atggatgggt tcatgccagg
      781 cggtttgcga ccaactgggg tccgaagggt taaagctcaa caaggccgcc atcaaccaga
      841 cggcaaaaag ggcaataagt atcaacaacg cttccagaag tcggcgcccg ctgcttaact
      901 tcgtcaatgt gacgtctttg tcttcagtat attcctggct caaaaaaggc tctccaggtt
      961 ccaggctttt cccgcccgat gctaaaacgg acaacagcac cgggttgccc cggcactgtt
     1021 gctgtatgga ttaacaggag tgtaatcaaa ctacggcgat tttgcacctg ttccgtgtta
     1081 gcgtgtctta ataaccagac gattactctg ttttacctct tccatcacta cgtaagttcg
     1141 ggtgtcgttc acacctggca agcgcagcaa cgtctctccc aatagttttc gatacgctga
     1201 catatccggt acacgggttt tcaacaggta gtcgaaatcg ccggaaacca aatgacactc
     1261 ctgaatctct tcaagctttt tcacggcggc attaaactgt tcaaacacat ccggcgcgcc
     1321 gcgatttaag gtaatctcaa cgaataccag aagtgacgca tccagataat gcgggttcaa
     1381 cagcgccgta tagccctgga taaacccctg tcgctccagc cgacgcacac gctcaaggca
     1441 aggtgtcggc gaaagtccta ctcgtttaga aagctcgacg ttggaaatac gcccatcctt
     1501 ttgcagttca ttaagaatgt tacgatcgat acggtcgaga tctttgccag ggcgcttctt
     1561 gctatctacc attattattg tctctctgta ttccttccct actcctgcct gactctactc
     1621 acatcactgt tcagagtcgc tgcccatcac aatagaccga aacccagagg gattaacggc
     1681 gtgcaatgcc tggtctatgg tgagaagacc gttgcctcgc ggcagctatc gacatcacga
     1741 atggcgtctg tccacgccat gcgtagattt cactagcccg gtaaacatgg tatttacatg
     1801 catgattatg cagcacatac ataacacagt ttttttcttc ctcgaatgtt ttcgcaaaac
     1861 agcaggtgat tgtcaaagca aaacatcgat ttttagtaca acatgccagt tattcattag
     1921 agagggcggt aaactgtcat ttcgtcacct tataagttac cgattttaat taaagtttgt
     1981 gatgataacg tcgctgccgc ggtcgttcat cggttcatgc tattacacat attgttaaca
     2041 aaatcgttat gctctttttt tacgtctgta aattctctac aattctgctc attgtctgcc
     2101 aacaactatg gggatctcat gggcacgacc aaacacagta agctgcttat tctgggctca
     2161 ggaccggcgg gatataccgc ggcggtgtat gccgcgcgcg caaatttaca gccagtactt
     2221 attaccggta tggaaaaagg cggtcaactg actaccacga cggaagtgga aaactggccc
     2281 ggcgatccaa acgatttgac cggcccgctg ctgatggaac gcatgcatga acatgcggca
     2341 aaatttgaaa ccgagataat ttttgatcac atcaacaacg tggatctgca aaatcgtccg
     2401 ttccgtctga caggtgacag cgcagagtac acttgtgatg cgttgatcat tgcgaccggc
     2461 gcttccgcgc gctatctggg gctgccatcg gaagaagcct ttaaagggcg cggcgtttcc
     2521 gcctgcgcaa cctgcgacgg tttcttctac cgcaatcaga aagtggcggt gatcggcggc
     2581 ggcaacaccg cagttgaaga agcgctttat ctgtccaaca tcgcttcgga agtgcacctt
     2641 atccatcgcc gtgacggttt ccgcgctgaa aaaatcctca ttaagcgcct gatggataaa
     2701 gtcgaaaatg gcaatatcat cctgcacacc aaccggacgc tggaagaagt gaccggcgat
     2761 cagatgggcg ttactggtct gcgtcttcgc gacacgcagc agagcgataa tatcgagacg
     2821 ctggacatcg ccggactttt cgtagccatc ggtcatagcc caaacacggc actcttcgaa
     2881 ggccagcttg agctggaaaa tggttatatc aaagttcagt ccggcaccca tggcaacgcc
     2941 acacaaacca gcatccctgg cgtattcgcg gcgggtgacg ttatggatca tatttaccgt
     3001 caggcgatca cctctgcagg tacgggctgt atggcggcgc tggatgccga acgctatctc
     3061 gatggtctgg ccgacgcgag caaatagttt ttacaaatca gtaacaaaag taaaaaaggc
     3121 gactataagt cgcctttatt tttgcgtcgt tgtaacattg ccctgcctga aattccaata
     3181 actcacctgc taagcgtgca atgaataaaa cccgtcaaaa agagctgacc cgctggttaa
     3241 aacagcaaag cgtaatctcc caacggtggt tgaatatttc ccgcctgttg gggttcatga
     3301 gtggcgtatt aattgtcgct caggcctgga tcatggcgcg tatcctgcaa catatgatca
     3361 tggagaacat tccacgggaa gcgctgttgc tcccttttat cctgctgata ctgatctttg
     3421 tcctccgcgc ctgggtggtg tggttgcgcg agcgcgtcgg ttttcatgcc ggacagcata
     3481 ttcgctttga gatccgccgt caggtgttgg atcgtctgca gcaagccggc ccagcctgga
     3541 ttcagggcaa gcccgccggt agctgggcga cgctggtgtt ggagcagatt gacgatatgc
     3601 atgactatta tgcgcgctat ctgccgcaaa tggcgcttgc cgtttgcgta ccgctcttaa
     3661 tcgtggcggc gattttcccg tcaaactggg cggcggcgct gattctgctg ggcactgccc
     3721 cgctcattcc cctatttatg gcgatggtgg ggatgggcgc ggctgacgcc aaccgccgca
     3781 atttcctggc gcttgcccgg ctaagcggcc attttcttga ccgtctgcgc gggatggaaa
     3841 cgctgcgaat tttcggtcgt ggagaagcgg aaaccgagag cattcgcgca gcatcgcagg
     3901 attttcgtca gcgcacgatg gaagtactgc gcctcgcctt tttatcttcc ggcgtgctgg
     3961 aatttttcac ctcgctttct attgcgctgg tcgccgttta ttttggcttc tcttacctgg
     4021 gcgagctgaa ctttggtcat tacggtaccg gtgtgacgct cgccgccggg ttcctcgcct
     4081 tgatcctcgc gccggagttt ttccagccat tacgcgacct cggcacgttt tatcatgcta
     4141 aggcgcaggc ggttggcgcg gcggatagtc tgaagacatt tctggaaaca ccccttgccc
     4201 acccggcgcg cggcgaagtt gagctggcgg aaaacgaacc tgtaaccatt gacgcagtca
     4261 atcttattat cacctcgcca gaaggcaaaa cgcttgccgg gccgctgaat ttctcattag
     4321 cggcaggaga acgcgccgtc ctggtaggac gcagcggttc cggtaaaagc tctctgttga
     4381 atgtattatc cggttttctc tcctatcagg gatctttgcg tattaatggt gtcgaacttc
     4441 gcgatctctc gccggaatcc tggcgccagc atctctcctg ggtcggacaa aacccgcaat
     4501 tacctgcggc gacgctacgc gaaaatgtat tactggcgcg cccggacgcc agcgagcagg
     4561 aactttatgc cgcgcttgac gccgcatggg taagcgaatt tttaccgctg ctgccgcagg
     4621 gagtagacac cccgctcggc aatcatgcca gcagactttc cgtcggccag gcacagcgtg
     4681 tagcggtcgc ccgcgcgcta cttaatccct ctcaactgct actgctggat gaaccggcgg
     4741 caagcctgga cgctcacagc gagcaacgcg tcatgcaggc attaaaagcg gcgtcaaaac
     4801 gccagaccac attaatggtg acgcatcagt tggaagatct cgccgactgg gacgctatct
     4861 gggttatgca agatggcgcg attgtcgaac aaggcagcta tgccgaactc agcgccgcca
     4921 acggcgcttt tgcgacgtta ttggctcacc gtcaggagga tatttaaatg cgcgcgctac
     4981 tcccttatct gacgctttat aaacgccaca aatggatgct aacgctggga attgcgctgg
     5041 caatcctgac cctgcttgcc agtatcgggc tgctgacgct ttccggctgg ttcctgtccg
     5101 cgtccgctat cgcaggcttc gcgggaattt acagttttaa ctatatgctc ccggcggccg
     5161 gcgtgcgcgg cgcggccatt acccgtaccg ctggtcgtta ttttgaacgt ctggtaagtc
     5221 atgacgccac gttccgcgtg ctgcaacatc tgcgtattta taccttcagc aaacttctac
     5281 cgctctcccc cgcgggtctg gcgcgatatc agcaaggtga actgctgaac cgcatcgttg
     5341 ccgacgtcga cacgctggat catctctatt tgcgcgtcat ctccccgctg gtcggtgctt
     5401 ttgtagtgat tatgattgtc accctggggc ttagcgttct cgacgtgacg ctggcgatca
     5461 cgctgggcgg cattatgctg ttgacgctgt ttattatgcc gccggtgttt tatcgcgccg
     5521 gcaaaaatac cagccaaaat ctgacgcatc tacgcggtca gtatcgccag cagctcacgt
     5581 catggttaca gggccaggcg gaactcacca tttttggcgc cagcaaacgc tatcgggcgc
     5641 aaatggaagc caccgaatta caatggcatg aggcccaacg ccgacagtct gaactcaccg
     5701 ccttatcgca ggcgttaatg ctgctgattg gcgcgctggc ggtgatgtta atgttgtgga
     5761 tggcctccgg cggcgttggc ggcaatatgc agcccggcgc gctcatcgcg ctgtttgtct
     5821 tctgcgcgct ggcggctttc gaggcgcttg cgcccgttac cggcgcattc caacatctgg
     5881 ggcaggttat cgcctctgcg cttcgtatca ctgaattaac ggagcaaaaa ccggaggtga
     5941 cctttccaca ggcagaaact cccgcgccgg aaaaggtcac actcaccctg cgggacgttt
     6001 cgtttcgtta tcccgaccag ccgattaatg cgctcaatgc cctctcatta caggctaatc
     6061 ctggcgagca tgtcgctatt ctggggcgta ccggctgcgg aaaatcaacg ctgttgcagc
     6121 tactcacccg cgcctgggac ccgcaacaag gcgaaattct gctcaacgat cttccgctat
     6181 cctcgctgag cgaatccgcc ttacgccgga ctatcagcgt ggtgccgcag cgtgtccacc
     6241 tgttcagcgc cacgctgcgt gataatttat tactggcggc gcccaatgcc agcgacgaag
     6301 ccctttccga catgctgcgt cgcgtcggcc tcgaaaatct gctcgaagat agtgggctta
     6361 atagctggct cggcgaaggc ggtcgtctgc tatccggcgg cgaacttcgt cgcctggcca
     6421 tcgcccgcgc gctgttgcac gatgccccgt tgatgctgtt ggatgagcct actgaggggc
     6481 tggatgcgac caccgagagc gaaatgctgg aattacttgc cgatgtgatg cgcgaaaaaa
     6541 ccgtcctgat agtgactcac cgtttgcgcg gcctggcccg ttttgatcaa atcatcgtaa
     6601 tggacgacgg gcgcatcatt gagcgaggca ctcatgcaga attgttagcc ggacaagggc
     6661 gctattatca gtttaaacaa cgtctgtaag ctattattga acgatccgac ttgcgtactg
     6721 gagtttcgcc gtcatgcgtc tggttcagct ttcccgacat tctatcgcct tcccttcgcc
     6781 ggaaggcgct ttacgcgagc ctaacggttt actggcactg ggcggcgatc tcagccctgc
     6841 ccggttgtta atggcctacc agcacgggat tttcccgtgg ttttcgccgg gcgacccgat
     6901 tctgtggtgg tcgcccgatc cgcgcgccgt gctgtggcct gaaaagtttc acctcagtcg
     6961 cagcatgaag cgctttcaca acgcatcccc ttaccgcgtg acgctcaatt acgctttcga
     7021 ccgggtcatt gatggatgcg ccaatcaccg tgacgaaggc acctggataa cgcgtggtat
     7081 tgaggaagcc tatcgccgat tacatgaatt gggccacgcg cactccattg aagtgtggcg
     7141 cgatcgggaa ctggtcggcg ggatgtatgg cgtctcgcag ggggcgctat tttgcggcga
     7201 atcgatgttt agccgccagg agaatgcctc taaaaccgca ctgctggttt tttgcgctga
     7261 atttacccgc cacggcggta aacttattga ttgtcaggta cttaatagtc ataccgcctc
     7321 gctcggtgcc attgaaattc cacgtcgtga ctacctcgat cacctcgcgg ccttacgcca
     7381 acagccgctg gcctcccgtt tttgggtgcc gcggacatta tttttgcccc ggaagtgaat
     7441 gttttcggca cattttttat tggggtgtta taattgctgc cgcagaattg gtttagctca
     7501 ttatcacgca gcccgttgtc aggtaacgcc catcgtttat ttcaccgttc ccttatatgt
     7561 tgcgcttatg tcgatacatc aggcggtagt atcagggaaa aggtgtataa cgcggcgttg
     7621 tcgtgtgtcg cggaatcatg tgctaaacct ggtttgctgt gttttaaacg cacaaatctt
     7681 tacttatcaa aagaagttcg gcattatctt gccggttcaa attatggtag tgatacccca
     7741 gaggattaga tggccaaaga agacaatatt gaaatgcaag gtaccgttct cgaaacgtta
     7801 cctaatacca tgttccgcgt agagttagaa aacggtcacg tggttactgc acacatctcc
     7861 ggtaaaatgc gtaagaacta catccgcatc ctgacgggcg acaaagtgac cgttgagctg
     7921 accccgtacg acctgagcaa aggccgcatt gtcttccgta gtcgctaatt gtctcctcac
     7981 gccctgaagg gcggctggat aaaaggtcgg tttaaccggc cttttttgcg tccattaagt
     8041 cgatgaatga cgagcaggtt actcttccac catccgcgca tactcttccg tcaaaaaatc
     8101 gaccaacgca cgtacggaag gtaatagccc tcgccgggat gggaacacag catgaataac
     8161 ctcccgccgg ggctcccact cttccagcac cgcgaccagt tcaccggcgg ccagttgttc
     8221 tttcaccatt aagacaggta actgcacaag ccccacgccc gccatcgccg cctcgcgtag
     8281 cgccaacatg tctgtagtaa tcatacgcgg ggtaaaatgg acttccgcac gcgcgccctg
     8341 cgggccgtaa agttcccagc ggtggatatg cttgccggat gcaagactta gccctggcca
     8401 atggctcaac tccgccggcg cggaagggat tcccatccgt gcgatgagat ccgggctggc
     8461 aaacaggcga tgccctctgt cagccaggac gcgcatcacc aggtcgctat cttcaaacgg
     8521 gcgcggcctg acgcgaatcg ccacatccac cccctcccct acgacgtcca cccgacgatt
     8581 ggtcgcttca agctgtagcg aaacatcagg ataacgcgcc ataaacttcg ccagcattgg
     8641 gccgatgtgt acatgcagca gcgtcaccgg gcaggttagc ttcacgatac cgcgaggctc
     8701 tacctgcaat gcggcaatgg catcctgcgc cgcctgagct tccaccagca tcgctttaca
     8761 gtgctcatag aatgtttgcc ccacttcggt aacgttaaac tgccgggtgg ttcgctgaat
     8821 caatcgcacg cccagccgtt cctccagttg cgcaatacgc cggctcagtt ttgattttgg
     8881 ttcatcaagc gcacgccccg ccgcggcaaa cccaccctct tcgaccacat gcacaaacca
     8941 cgcaaaatca ttgagatccg tttttatcat tacattgtcc tattaatgga acggtatgag
     9001 ccattttacc cactaccgaa cattttgtca tgaatataag cttattcaca tcaagacaac
     9061 gccactgagg agaacaccat gaaacagatt acaggcgtct ataccgcacc tcgcccgcac
     9121 tgggttggcg atggatttcc ggttcgttca ctcttttctt atcagtcaca tgcgcagcag
     9181 ttgaatccat tcctgctgct ggattatgcc gggccgcaca cctttacgcc gggtaatgaa
     9241 aaacgcggcg ttggggagca tccacaccgc ggtttcgaga ccgtgacgat tgtttatagt
     9301 ggcgaagtcg agcatcggga ctctaccggt cgcggcggcg ttatcggccc gggcgacgtt
     9361 cagtggatga gcgcaggcgc aggcattttg catgaagagt tccactccga cgcgtttacc
     9421 cgtcggggcg gcgaactgga aatgatgcag ttgtgggtta accttcccat gaaggacaaa
     9481 atgaccaccc cgggttatca aagcattacc cacgatgtta tcccgaccgt tacgttgccg
     9541 gatgacgccg gagtcgtgcg ggtcatcgca gggcgttatg aagagacaaa aggcccggcg
     9601 cacactttct cgccgctcaa tgtctgggat atgcgcctgc aacgcaatcg ccagcttaca
     9661 ttggcacagc cggaaggatg gagcgccgcg ctggtggtac tgaaaggcaa tatcacggtg
     9721 aacggcacga cgccggccaa cgaagcgcaa ctggtggtat tgagccagca agggaaaacg
     9781 ctgcaccttg aggccagcag cgacgccagc gtattgctgt tatcaggcga gccgctgaat
     9841 gaaccgattg tgggttacgg cccatttgtt atgaacacga aacaagagat cgcagaagca
     9901 gtccgcgatt tcaactccgg ccgttttggc caaatctgaa aacatgaagg agaacacgat
     9961 gtcaagtcct gctagtttta atggtttgcg cccggtaatt gatgttaacg attccgtgat
    10021 gcttttaatc gatcatcaaa gcggtctttt ccagaccgta ggcgatatgc caatgccgga
    10081 attacgcgct cgcgccgcgg cgttggcgaa gatggcgacg ttagcgaaaa tgccggtcat
    10141 taccacggca tccgtaccgc aaggtccgaa cggcccgctg atcccggaga tccacgctaa
    10201 tgcgccacat gcacagtaca ttgcgcgcaa aggtgaaatt aacgcctggg ataacgaaga
    10261 tttcgttaag gcggtaaaag cgacgggtcg taagacgctg atcattgccg ggacgattac
    10321 cagcgtgtgc atggcattcc cggccattag cgcggtagca gaaggttata aggtatttgc
    10381 cgtgatcgac gcatccggta cctacagtaa gatggcgcag gagatcaccc tggcgcgtat
    10441 cgtacaggct ggcgtcgtac cgatggatac tgccgcagtt gcctctgagc tgcaaggcac
    10501 ctggaaccgt gaagacgcag ccgcgtgggc cgacgtttat actcaggtat tcccggccta
    10561 tcaactgctg atagaaagct acagcaaagc gcaggatgtg gtgaaaaaca acgaaatgtt
    10621 ggattcacag cgctaatttg cctccccgcg ccagtttggg cggggattat gtctattgca
    10681 tgagcaaacg acagtgaata tgtaaattct gcttgaccgt tttagcgcaa ctccctatag
    10741 tagcgccccg ttgcccccca agcggtcagg cagcaataca atatggtgag gtgtccgagt
    10801 ggctgaagga gcacgcctgg aaagtgtgta tacggcaacg tatcgggggt tcgaatcccc
    10861 ccctcaccgc catatttaag ttgagagcct gtacagaagt acgggctttt tgcttatatg
    10921 tatcccccaa accaaggggg gatgagaacc accgaccggg gttcgacaac tggcgcagcc
    10981 agttggacag accgggcgcg cagcgaacgg gctgccccga aggggcgagc aaagcgagtc
    11041 aatccccccc tcaccgccat attcaagaaa gagctcgtac gaaagtacgg gcttttgtat
    11101 ctaaacttct tgtttttact gtgattttcc tgatgaaagg tttgtttttg gacctttggt
    11161 tgctacacca aacttactat agattgtgta aaacagccct acttccctac ctgaaacgct
    11221 ttagaaaagt ttgcataagt atctctcggt agtaaaaaag caccgagttc ctctgtctga
    11281 tgctgctgtt gatttgttaa aagatttacc acgattaaaa gataacaatc atgtattccc
    11341 tgcccctcgc gctgaaacac tttctgatat gtcgttattg gctgtattga aacgaatggg
    11401 atatatcgac ttaacgcaac atggcttccg ttctactttc cgtgagtggg ctggtgaagc
    11461 aacggattat caacgtgagg ttattgaaca tgcgttggcg caccagttgg cagataaggc
    11521 tgaagcagcg tatcagcgtg ggacgttatg gcctaaacga gtggcgctga tggatgactg
    11581 gacggggtat agcactgcca acagctaagc tacctgtacg aaagcattat cgttgataac
    11641 aacgtagaaa gtgtgatgct aatagcattc gctttcgaaa atgtgataag gaataatttc
    11701 acgatgaact atttcttata tgattattat catggtttgc aaattacata aaccactcaa
    11761 ggagaggtta tgcccggact gataggctac tggaagcaac ttcccaccaa agatgaatat
    11821 attaaaaaac acaatatgag caaaatatcc tgctacagtt gtggtcacga gaaattcagc
    11881 gatgttggtt tgatacaggt atgggataat cacagaagaa ttctttgtgc taagtgtaag
    11941 actactcttt tcagagaaga ggattagttt ttttggcatt ggtaacagcg gcttcagcat
    12001 cccttttcac gcagcgggtc gggctttttt tcgcatttga cccgtcgatt accggatgat
    12061 ggcgcaattt acaagcgcct tatccgccta ccgcgagcac aacaccatca ggctaactat
    12121 tagccggcat aaaaaaaccg ggcgctaagg cccggtttgt acggcagtga aacgaagatt
    12181 agtgcgcggc ttccggcttg tgcttttgcg cactctggaa gtcatacgtc aacgcatttt
    12241 tctctttatc cagcgcgacg gtgacctgtc cgccgtcaac cagcgatcca aacagcaact
    12301 cattggccag tggttttttc aggttatcct ggatcacacg tgccattggt cgtgcgccca
    12361 tcgcccggtc atagcccttt tccgccagcc agtcgcgcgc ttcctgactg acttccaggg
    12421 agacgccttt ctgatccaac tgagcctgca actcgacgat aaacttatcg acaacctgat
    12481 gaatcacctc gccagacaga tgatcgaacc aaataatgtt gtcgagacgg ttacggaact
    12541 caggcgtaaa cactttcttg atctcaccca tcgcatcggt actgttgtcc tgatgaataa
    12601 gaccaataga tttacgttcg gtttctcgca cgccggcgtt ggtggtcatc accagcacca
    12661 cgttgcggaa atccgccttg cggccgttgt tatcggtcag cgtaccgtta tccatcacct
    12721 gcagcagcag gttaaagaca tccgggtgcg ctttttcgat ctcatccagc aacagcaccg
    12781 catgaggatg cttaatcacc gcatccgtca gcagcccgcc ctggtcgaaa ccgacgtatc
    12841 ccggaggcgc gccgatcaga cggctcaccg tatgacgctc catatattcg gacatatcaa
    12901 aacgcaacag ctcaataccc agcgcttttg aaagctgtac cgtaacttca gttttcccta
    12961 cgccagttgg gccggcgaac aagaatgagc cgacaggttt atgctcatgg cccaggcccg
    13021 cacgactcat cttaatagct tcggtcagcg cctcaatcgc gttatcctgg ccgaagacca
    13081 gcattttcag acgatcgccc aggttcttca gcgtatcgcg atcgctctgc gagacgctct
    13141 tttcaggaat tcgcgcaatt cgcgccacta cggactcaat atccgccacg ttgaccgttt
    13201 tcttacgttt gctcaccggc atcagacgcg cccgagcgcc cacttcgtca atcacgtcaa
    13261 tggctttatc cggcagatgg cggtcattga tatattttac cgccagctcg accgccgcac
    13321 gcaccgcttt cgcggtataa cgcacgtcgt ggtgcgcttc gtacttaggt ttcaagccgt
    13381 tgataatttg caccgtctct tccaccgaag gctcggtaat atcaattttc tggaaacggc
    13441 gcgctaatgc gcggtctttc tcaaaaatat tgctgaattc ctgataggtc gttgagccga
    13501 tcacccggat cttgccgctg gaaagcagcg gtttaatcag atttgccgca tccacctgtc
    13561 cacccgacgc cgcgccagcg ccgataatgg tatggatttc atcgataaac aggatgctgt
    13621 tggtatcctg ctcaagctgt ttcagcaacg ccttaaaccg tttttcaaaa tcgccgcggt
    13681 atttggtgcc cgccagcagc gaaccgatat ccagagagta aatagtacaa tcggccatca
    13741 cttccggcac atcgccctgc acgatacgcc aggccagccc ttcggcaatc gccgttttgc
    13801 cgacgccgga ttcccctacc agcaacgggt tatttttacg gcgacgacac aagacctgga
    13861 tcgcgcgttc aagttctttt tcacgaccaa tcagcggatc gatgccgccc acgcgagcaa
    13921 gttggttaag attcgtcgtg aagttttcca tacgttcctc cccgccagct tgttcgtcgc
    13981 cagctggctg attgccgaga tcggaagatt ggctcggttc gtcttttcgc gtcccgtgag
    14041 aaataaagtt cacgatatcc agacggctca cttcatgctt acgcagcaga taagccgcct
    14101 gtgattcctg ctcgctaaag atagccacca gcacattcgc gccagtcact tcactacgcc
    14161 cggaagactg aacgtggaag acggcacgtt gcaggacacg ctggaaactt aacgtcggct
    14221 gcgtatcacg ctcttcttca ctggcaggca gtacgggtgt ggtttgttca atgaaggctt
    14281 cgagttcctg acggagcgcc accagatcca cggagcatgc ttccagcgct tcgcgagccg
    14341 atgggttgct gagcagcgcc agcaacagat gctcgacggt cataaactca tgacggtgct
    14401 cgcgcgctct ggcgaaagcc atgtttaaac tgagttccag ttcttgattg agcataggca
    14461 cctcccccaa tttttatacc tgcattcagg ctttttccag cgtacacagc aacggatgct
    14521 cgttctccct tgcatacttg ttcaccatcg ccactttggt ttccgccacc tcggcggtaa
    14581 acacgccgca gatagctttg ccttgatagt gaactgcaag catcaattgc gttgcacgtt
    14641 ctacatcata agaaaagaat ttttgtaaca cgtcaataac aaactccatc ggagtgtagt
    14701 catcattgac taatatcact ttatacatag atggcggttt tagcgcgtcg cgcacgctat
    14761 cttccaccaa ctggtcaaaa tccagccaat cgttcgtctt acccattgtc agtcgtcatt
    14821 atcggttacg gttgtcggca ggaaaatctg ccgctgacca gagtctatgc acacaatcaa
    14881 tctacctcaa ttgatagata actaacatct atcagtacca tccacgacat ctgtcacatt
    14941 cccggcaata gcgttaactg cttcaaattt ttgattcatt tttacccgat cccccctgcc
    15001 tgatgcttga cgcctcgcct gatttctcta aattgtaatg tcgagagttg gtgaggtttt
    15061 gaacagcccc cactccgtca ccggttcatt ccatcttact tatataagat ttacgaagga
    15121 tgtcgaagca tggaaacggg tactgtaaag tggttcaaca atgccaaagg gtttggtttc
    15181 atctgccctg aaggcggcgg cgaggatatt ttcgcccatt attccaccat tcaaatggat
    15241 ggttacagaa cgcttaaagc cggacagtct gtccggtttg atgtccacca ggggccaaaa
    15301 ggcaatcacg ccagcgtcat cgtgcccatc gaagcagagg ccgttgcata gctcctctgt
    15361 ctcattgtgt acatccagaa ggcaaaatgc cagcccgatc ggctggcatt tttatttaac
    15421 gccagtgcct ggtggcgaca ctgttgcatc ttatcaggcc gacaaatgac gtcagcaaga
    15481 ttactctctt gccagcgcat ccaccgggtc cagtcgcgcc gcgtttctcg ccggtagcca
    15541 gccaaacaat atcccggtaa acgtcgaaca taaaaacgcg ctcgccagcg ctgtcagtga
    15601 aaaaccgatc tcccagccgg gcaggaaaag ctgtagcata aatgcgatga acatcgacaa
    15661 gctaatcccc agcgctccac caaccaggca aaccagcacc gcttcaataa gaaactgctg
    15721 tagcacatcg ctggcgcgcg cgcctaccgc catacggatg ccgatttcac gcgttcgctc
    15781 ggtgacggaa accagcataa tattcataac gccgatgccg ccgacaacca gcgaaatgac
    15841 ggccaccagc gtcagaaata actgaagagt ataggtggtt ttttcagccg ttttcaggac
    15901 gctgtccata ttccaggtga agaagtcttt tttaccgtgg cgtaaggtga gcaggcgggt
    15961 aagctgctgt tcagcctgat cgctatcaac gccatctttc acacgaacgg tgatcgagtt
    16021 aagccatgac tgacccatta tgcgatctga catcgtgcta tagggcaacc aaacttgcaa
    16081 cagattgcta ttgccgtaca tggacggttt ctcttccgcc acgccaataa caataaccgg
    16141 catattaccc accagcacca cttctcctac gacattcgct ttatttggaa atagctggcg
    16201 tcgcgtgttg gcatccaaca ccaccacctg cgcgcgatcc tgttgctgta cagcattgaa
    16261 ggtgttcccc tccctaaagg acatgccgta aacgttaaaa taatcgccac tgacgccatt
    16321 agcatttacg gcaatatcaa tattgccata gcgaagacgt aagctctttg aaacgctggg
    16381 cgtcgcagag ttaacccacg gctgtttctg aatagccacc agatcgtcat atttcagcgc
    16441 ctgtcgatac tgcgggttgt cgtcgccaaa atctttgcct ggatgaatat caatcgtgtt
    16501 agtgcccata gcgcggatat ccgccagtac catctgtttt gcggcgtcgc cgaccaccac
    16561 aatcgacacc accgacgcaa taccgataat aattcccagc atggtcagta aagtacgcat
    16621 tttgttagcg gccatcgcta accacgccat cgacagcgct tcgcgaaagc tgctggcaaa
    16681 ttgccgccag ccgggagccg tattaactac ggcagcgtca acgccctgtt cgcgtttctt
    16741 ttcctgcgcg ggcggattat ggacaatctt gccatcgtga atttcaataa tccgctccgc
    16801 ctgggcggca atcagcggat cgtgcgtcac aatgatcacc gtatgtccgc gatcgcgcag
    16861 ttggcgcaaa atcgccatta cctcttcgcc ggaatggcta tccagcgcgc cggtcggctc
    16921 atccgccaga atcacctgtc cgccgttcat cagcgcgcgg gcaatactga cacgctgctg
    16981 ctgtccgcca gaaagctgtg aaggtggata atcgacgcga tcgcttaatc ccagccgcaa
    17041 aagcaactct ctggcgcgcg cctggcgttt tttgcgttca atgccggcgt agacggcggg
    17101 gatttcaaca ttttgcgctg ccgttaaatg cgacaacaga tggtagcgct gaaagataaa
    17161 gccaaaatgc tcacgcc
//
LOCUS       DAGWFR010000079        16916 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.080, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000079 DAGWFR010000000
VERSION     DAGWFR010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 16916)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16916)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16916
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.080"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..193
                     /locus_tag="MOX77_002673"
     CDS             <1..193
                     /locus_tag="MOX77_002673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HCA3358162.1"
                     /translation="LQGVDSVMTPPARRAEAWARLVKDLPESFYAQAATEITLADAPK
                     FADAIINNQVQGRTLVKIK"
     gene            306..1310
                     /gene="msrP"
                     /locus_tag="MOX77_002674"
     CDS             306..1310
                     /gene="msrP"
                     /locus_tag="MOX77_002674"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase catalytic
                     subunit MsrP"
                     /protein_id="HCA3358163.1"
                     /translation="MKKIRPLTEADVTAESAFFMQRRQVLKALGISAAALSLPSTAQA
                     DLFSWFKGNDRPKAPAGKPLEFSQPAAWRSDLALTPEDKVTGYNNFYEFGLDKADPAA
                     NAGSLKTEPWTLKISGEVAKPFTLDYDDLTHRFPLEERIYRMRCVEAWSMVVPWIGFP
                     LYKLLAQAQPTSHAKYVAFETLYAPDDMPGQKDRFIGGGLKYPYVEGLRLDEAMHPLT
                     LMTVGVYGKALPPQNGAPIRLIVPWKYGFKGIKSIVSIKLTRERPPTTWNLSAPNEYG
                     FYANVNPHVDHPRWSQATERFIGSGGILDVQRQPTLLFNGYANEVASLYRGLNLRENF
                     "
     gene            1311..1910
                     /gene="msrQ"
                     /locus_tag="MOX77_002675"
     CDS             1311..1910
                     /gene="msrQ"
                     /locus_tag="MOX77_002675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase
                     heme-binding subunit MsrQ"
                     /protein_id="HCA3358164.1"
                     /translation="MRLTVKQITWLKVCLHLAGFLPLLWLFWAINHGGLSADPVKDIQ
                     HFTGRTALKFLLATLLVSPLARYAKQPLLIRTRRLLGLWCFVWATLHLTSYALLELGI
                     HNLALLGSELISRPYLTLGIISWLVLLALTLTSTQFAQRKLGKRWQTLHNVVYLVAIL
                     APIHYLWSVKILSPQPVIYAALALALLALRYRKFRQWWR"
     gene            2304..2774
                     /gene="accB"
                     /locus_tag="MOX77_002676"
                     /gene_synonym="fabE"
     CDS             2304..2774
                     /gene="accB"
                     /locus_tag="MOX77_002676"
                     /gene_synonym="fabE"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HCA3358165.1"
                     /translation="MDIRKIKKLIELVEESGISELEISEGEESVRISRTTANAGFPVM
                     QQAYAAPMMQQPALSNAVAPAATPAMEAPAAAEISGHIVRSPMVGTFYRTPSPDAKAF
                     IEVGQKVNVGDTLCIVEAMKMMNQIEADKAGTVKAILVESGQPVEFDEPLVVIE"
     gene            2785..4134
                     /gene="accC"
                     /locus_tag="MOX77_002677"
     CDS             2785..4134
                     /gene="accC"
                     /locus_tag="MOX77_002677"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009483995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HCA3358166.1"
                     /translation="MLDKIVIANRGEIALRILRACKELGIKTVAVHSSADRDLKHVLL
                     ADETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIF
                     IGPKADTIRLMGDKVSAITAMKKAGVPTVPGSDGPLGDDMNANRAHAKRIGYPVIIKA
                     SGGGGGRGMRVVRSDAELAQSISMTKAEAKAAFSNDMVYMEKYLENPRHIEIQVLADG
                     QGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIGYRGAGTFE
                     FLFENGEFYFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAGQPLSITQDEVVVRGHA
                     VECRINAEDPNTFLPSPGKITRFHAPGGFGVRWESHIYAGYTVPPYYDSMIGKLICYG
                     ENRDVAIARMKNALQELIIDGIKTNIDLQTRIMNDEHFQHGGTNIHYLEKKLGLQEK"
     gene            4243..4485
                     /locus_tag="MOX77_002678"
     CDS             4243..4485
                     /locus_tag="MOX77_002678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhdT family protein"
                     /protein_id="HCA3358167.1"
                     /translation="MDARFVQAHKEARWALWLTLCYLAAWLVAAYLSGDSPGITGLPH
                     WFEMACLLTPLVFILLCWAMVKFIYRDIPLEDDDAA"
     gene            4475..5926
                     /gene="panF"
                     /locus_tag="MOX77_002679"
     CDS             4475..5926
                     /gene="panF"
                     /locus_tag="MOX77_002679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/pantothenate symporter"
                     /protein_id="HCA3358168.1"
                     /translation="MQLEVILPLVAYLVVVFGVSIYAMRKRTAGTFLNEYFLGSRSMG
                     GIVLAMTLTATYISASSFIGGPGAAYKYGLGWVLLAMIQLPAVWLSLGILGKKFAILA
                     RRYNAVTLNDMLFARYQSRLLVWLASLSLLVAFIGAMTVQFIGGARLLETAAGIPYET
                     GLLIFGVSIALYTAFGGFRASVLNDTLQGLVMLVGTIVLLVGVVHAAGGLHQAVDTLH
                     ALDPKLVTPQGADDILSPAFMTSFWVLVCFGVIGLPHTAVRCISYKDSKAVHRGIIIG
                     TIVVAILMFGMHLAGALGRAVLPDLTVPDLVIPTLMVKVLPPFAAGIFLAAPMAAIMS
                     TINAQLLQSSATIIKDLYLNLRPDQMQNEIRLKRMSAAITLLLGALLLLAAWKPPEMI
                     IWLNLLAFGGLEAVFLWPLVLGLYWERANAAGALSAMIVGGVLYALLATFNIQYLGFH
                     PIVPALLLSLLAFLIGNRFGSSASQATVLSTDK"
     gene            5938..6819
                     /gene="prmA"
                     /locus_tag="MOX77_002680"
     CDS             5938..6819
                     /gene="prmA"
                     /locus_tag="MOX77_002680"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HCA3358169.1"
                     /translation="MPWIQLKLNTTGANAEELSDALMEAGAVSITFQDTHDTPVFEPL
                     PGETRLWGDTDVIGLFDAETDMKDVVAILEQHPLLGAGFAHKIEQLEDKDWEREWMDN
                     FHPMRFGERLWICPSWRDIPDENAVNVMLDPGLAFGTGTHPTTSLCLQWLDGLDLNGK
                     TVIDFGCGSGILAIAALKLGAAKAIGIDIDPQAIQASRDNAERNGVSDRLELYLPKDQ
                     PEAMKADVVVANILAGPLRELAPLISVLPVEGGLLGLSGILASQAESVCDAYAELFTL
                     DPVVEKEEWCRITGRKK"
     gene            7479..8444
                     /gene="dusB"
                     /locus_tag="MOX77_002681"
     CDS             7479..8444
                     /gene="dusB"
                     /locus_tag="MOX77_002681"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008785970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HCA3358170.1"
                     /translation="MRIGQYQLRNRLIAAPMAGITDRPFRTLCYEMGAGLTVSEMMSS
                     NPQVWESDKSRLRMVHVDEPGIRTVQIAGSDPVEMADAARINVESGAQIIDINMGCPA
                     KKVNRKLAGSALLQYPDLVKSILIGVVNAVDVPVTLKIRTGWAPEHRNCVEIAQLAED
                     CGIQALTIHGRTRACLFNGEAEYDSIRAVKQKVSIPIIANGDITNPHKARAVLDYTGA
                     DALMIGRAAQGRPWIFREIQHYLDTGELLPPLPLAEVKRLLCTHVRELHDFYGQAKGY
                     RIARKHVSWYLQEHAPDDQFRRTFNAIEDASEQLEALEAYFENFA"
     gene            8470..8766
                     /gene="fis"
                     /locus_tag="MOX77_002682"
     CDS             8470..8766
                     /gene="fis"
                     /locus_tag="MOX77_002682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001465625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator Fis"
                     /protein_id="HCA3358171.1"
                     /translation="MFEQRVNSDVLTVSTVNSQDQVTQKPLRDSVKQALKNYFAQLNG
                     QDVNDLYELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYGMN"
     gene            8852..9736
                     /gene="yhdJ"
                     /locus_tag="MOX77_002683"
     CDS             8852..9736
                     /gene="yhdJ"
                     /locus_tag="MOX77_002683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine-specific DNA-methyltransferase"
                     /protein_id="HCA3358172.1"
                     /translation="MKAECEPQYFGDESKKIIHGDALTELKKLPSESIDLIFADPPYN
                     IGKDFDGMVESWDEASFLAWLYECIDECHRVLKKHGTMYIMNSTENMPYIDLKCRTLF
                     TIKSRIVWSYDSSGVQAKKYFGSMYEPILMMVKNPKSYTFNRDAILVETTTGAKRALI
                     DYRKNPPQPYNQKKVPGNVWSFPRVRYLMDEYENHPTQKPSALLKRIILASSNPSDTV
                     LDPFAGSFTTGAVAAASGRKFIGIELNNEYVKMGLRRLSVTSHYSENELAKVKKRKTQ
                     NLSKKQRNVGINALSSEK"
     gene            9819..9983
                     /locus_tag="MOX77_002684"
     CDS             9819..9983
                     /locus_tag="MOX77_002684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2556 family protein"
                     /protein_id="HCA3358173.1"
                     /translation="MIRKYWWLVVFAVSVFLFDALLMQWIELMATEQDKCRNMDSVNP
                     LKLINCTDLE"
     gene            10134..11708
                     /locus_tag="MOX77_002685"
                     /pseudo
     CDS             10134..11708
                     /locus_tag="MOX77_002685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462298.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
     gene            11710..12135
                     /locus_tag="MOX77_002686"
                     /pseudo
     CDS             11710..12135
                     /locus_tag="MOX77_002686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462300.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
     gene            12147..15261
                     /locus_tag="MOX77_002687"
                     /pseudo
     CDS             12147..15261
                     /locus_tag="MOX77_002687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462301.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
     gene            15498..15719
                     /locus_tag="MOX77_002688"
     CDS             15498..15719
                     /locus_tag="MOX77_002688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358174.1"
                     /translation="MKRLIPVALLTTLLAGCAHDSPCVPVYDDQGRLVHTNTCMKGTT
                     QDNWETAGAIAGGAAAVAGLTMGIIALSK"
     gene            complement(16547..16662)
                     /gene="rrf"
                     /locus_tag="MOX77_002689"
     rRNA            complement(16547..16662)
                     /gene="rrf"
                     /locus_tag="MOX77_002689"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            complement(16702..16777)
                     /locus_tag="MOX77_002690"
     tRNA            complement(16702..16777)
                     /locus_tag="MOX77_002690"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(16742..16744),aa:Thr,seq:ggt)
BASE COUNT         4082 a         4252 c         4400 g         4182 t
ORIGIN      
        1 tttgcaaggg gtggactcgg tgatgacccc accggcacgt cgcgcagaag cctgggcgcg
       61 tttggttaag gatctgccgg aatcgttcta tgctcaggcc gccacagaga ttacgctggc
      121 ggatgcgccg aagttcgccg atgccatcat caataatcag gttcagggcc gtacgctggt
      181 gaagataaaa taacgtcacg tataaaaaaa tttacactta attacctatt tatttttaca
      241 cattgacaca ctccctatta tattcactac acgccatgtt gtggtgggta gaccgggagt
      301 ctgtgatgaa aaagatacgt ccattaacag aagccgatgt gactgcggaa tcggcttttt
      361 ttatgcagcg ccgacaggtg ctaaaagcat taggcatcag cgcggccgcc ttatccttac
      421 cctcaacggc gcaggccgat ctcttcagtt ggtttaaagg caacgatcgt ccgaaagcgc
      481 ctgccggtaa accgcttgag tttagtcagc ctgccgcctg gcgaagcgat ttagcgttaa
      541 cgccggaaga taaggtgacg ggctacaaca atttctatga gtttggcctt gataaagccg
      601 acccggcggc caatgccgga agtctgaaaa ccgaaccgtg gacgttgaaa atcagcgggg
      661 aagtcgcgaa accatttacg ctggattacg acgatttaac acatcgtttt ccattagaag
      721 agcgtatcta tcgaatgcgc tgcgtcgaag cgtggtccat ggtcgtgccg tggattggtt
      781 tccctttata taagctactc gcgcaggcac agcccaccag ccacgctaaa tatgtggcat
      841 tcgaaacact atacgcgccg gatgatatgc caggacagaa agatcgcttt attggcggcg
      901 gactgaaata cccttatgtc gaagggctac gtctggacga agccatgcat ccgctgacgc
      961 tgatgaccgt tggcgtctat ggtaaagcgt tacccccgca aaacggcgcg cccattcgcc
     1021 tcatcgttcc atggaagtat ggttttaaag gtattaaatc tattgttagc attaaactca
     1081 cccgcgaacg tccgccaacc acctggaatt tgtcggctcc caacgaatat ggtttttatg
     1141 ccaatgtgaa cccgcatgtg gatcatccac gctggtctca ggctaccgaa cgctttattg
     1201 gttcaggcgg tatccttgat gtgcaaaggc agccgacgct gctgtttaac ggctacgcca
     1261 atgaagtcgc ttcgctgtat cgcggtctca atttgcggga gaatttttaa gtgcgtctga
     1321 cagtaaaaca gataacctgg ctaaaagttt gtctgcatct tgccggtttt ttgccgcttc
     1381 tgtggctctt ttgggcgata aatcacggtg gactcagcgc agacccggta aaggatatcc
     1441 aacactttac cggtagaacc gcgctcaaat ttttgctcgc caccttgctg gtttcaccgc
     1501 tggcgcgcta cgctaaacag ccattattga tacgcacacg ccgcctgtta ggattatggt
     1561 gtttcgtttg ggcgacactg catttaacca gctatgcctt gctggaactg gggatacata
     1621 acctggcgct gttaggaagc gagttgattt cacgccctta tttgacgctt gggatcatta
     1681 gctggctggt gttattggcg ctgacgttga cctcaacgca atttgcgcag cgtaaattgg
     1741 gcaaacgctg gcaaacactg cataacgtcg tctatcttgt cgcgatcctg gctcccatac
     1801 attacctgtg gtcggtaaag attttatcac cgcaaccggt catctacgcg gcattagcgt
     1861 tagccctttt agcgttgcgt taccggaagt ttcgccagtg gtggcgctag tttggtgaac
     1921 tgtgcggtcg attgcaaaac gcaaaacagg taatgtcctt tttatgtttc gggttgatta
     1981 tcttccctga taagaccagt atttagctgc caattgcgac gaaatagtta taatgtgcga
     2041 ctttacattc cccaacggcg attttcgttc gcagataagg gtgacaatcg tgcaatgaag
     2101 gtatattttg ttttttgccc gaaaatggca gaagatagcc acacaatgac tggcaaatca
     2161 tgaatttcac cttcgggtgc tacggcataa caggcaaatc aaagatgcgc ggtattttac
     2221 ccgcggcagt cattcacatg ctttacagac ggcgctaaaa cgcctgtcac aatcacacta
     2281 aacaaagagt acggaaccca ctcatggata ttcgtaagat taaaaaactg atcgagctgg
     2341 ttgaagaatc aggtatctcc gaactggaaa tttctgaagg cgaagaatct gttcgcatca
     2401 gccgcacaac ggcaaacgcc ggtttcccgg tgatgcagca ggcttatgcg gcgccgatga
     2461 tgcagcaacc cgctctgtct aacgctgtcg cgccagcggc tactccagca atggaagcgc
     2521 ctgccgcagc ggaaatcagt ggtcacatcg tacgctcccc aatggttggt actttctacc
     2581 gcaccccaag cccggacgcg aaagcgttca tcgaagtggg ccagaaagtg aacgtgggcg
     2641 ataccctgtg catcgttgaa gccatgaaaa tgatgaacca gatcgaagca gacaaagcag
     2701 gcactgtgaa agcgattctg gtcgaaagtg gtcaaccggt agaatttgac gagccactgg
     2761 tcgtcatcga gtaacgaggc gaacatgttg gataaaattg tcatcgccaa ccgcggcgag
     2821 atcgcactac gtattcttcg agcctgtaaa gaactcggca tcaagaccgt cgctgtgcac
     2881 tcaagcgcgg atcgcgattt aaaacacgta ttgctggcgg atgagacggt ctgtattggc
     2941 ccggcaccgt ccgtaaaaag ttatctgaac atcccggcta tcattagcgc cgctgaaatc
     3001 accggcgcgg tggcaatcca cccgggttac ggcttccttt ctgagaacgc caattttgcc
     3061 gagcaggttg aacgctccgg ctttatcttt atcggcccga aagcggacac catccgcctg
     3121 atgggcgata aagtgtccgc gattaccgcg atgaaaaaag cgggcgtgcc gaccgtacca
     3181 ggatctgacg gcccactggg cgacgatatg aatgcgaacc gcgctcatgc caaacgtatt
     3241 ggctatccgg tgatcatcaa agcgtccggc ggcggcggcg gccgcggtat gcgcgtggtt
     3301 cgtagcgatg ctgaactggc gcagtccatc tccatgacta aagcggaagc gaaagcagct
     3361 ttcagcaacg acatggtata catggaaaaa tacctggaaa atccacgcca catcgaaatt
     3421 caggtgctgg cggacggcca gggcaacgct atctatctgg cggaacgcga ctgctccatg
     3481 cagcgtcgcc accagaaagt ggttgaagaa gccccggcgc caggcattac gccggaactg
     3541 cgtcgctata tcggcgaacg ctgcgcgaaa gcgtgcgtag acatcggcta tcgcggcgca
     3601 ggaacgttcg aattcctgtt cgaaaacggc gagttctatt tcatcgaaat gaacacccgt
     3661 attcaggttg aacacccggt aactgaaatg attaccggcg tcgatttgat caaagagcag
     3721 ttgcgcatcg cggcgggtca gccactgtcg atcacacagg acgaagttgt cgttcgaggc
     3781 catgcggtag aatgccgtat caatgccgaa gatccgaaca ccttcctgcc aagccctggc
     3841 aaaatcacgc gcttccatgc gcctggcggc tttggcgttc gctgggaatc tcatatctac
     3901 gcgggctaca cggtgccgcc gtactatgat tccatgatcg gcaaactcat ctgctacggt
     3961 gaaaaccgcg acgtggcgat tgcccgtatg aaaaatgccc tgcaggaact gattatcgat
     4021 ggtatcaaaa ccaatatcga tctgcagacc cgcatcatga atgacgagca cttccagcac
     4081 ggtggaacca acatccacta tctggagaaa aaactcggtc ttcaggaaaa gtaatcgcac
     4141 gttaatctca aaaggccggt gaatccggcc ttttttattt ctggggatag cgatgcccca
     4201 tcatgtacaa ttcccgcttt cttcacccat aagggacaaa aaatggacgc tcgttttgtt
     4261 caggcccata aagaggcgcg ctgggcgctg tggctgaccc tttgctatct ggcggcatgg
     4321 ttagtggctg cttacttatc tggagactcg ccgggaatta ccggtctgcc gcactggttc
     4381 gagatggcct gcttattgac gccgctggtc tttattttgc tgtgctgggc gatggtgaaa
     4441 ttcatttatc gcgatattcc gctggaggat gacgatgcag cttgaggtca ttctaccgct
     4501 ggtagcctat ctggtcgtgg tcttcggggt ctcgatttac gctatgcgca agcgtaccgc
     4561 cggcaccttt ttaaacgagt attttcttgg cagtcgttcg atgggcggga tcgtgctcgc
     4621 gatgacgctg accgccacct atattagcgc cagttcattt atcggcggtc ccggcgcggc
     4681 ttataaatat ggtctgggct gggtcttgct ggcgatgatc cagcttcccg ccgtctggct
     4741 ttcactgggt attctgggta aaaaattcgc tatcctggcg cgtcgctata atgccgtcac
     4801 gcttaacgat atgctattcg ctcgttacca aagccgcctg ctggtgtggt tagcaagcct
     4861 gagtttattg gtcgcgttta ttggcgcaat gaccgtacaa tttatcggcg gcgcgcgact
     4921 actggaaacc gcggcgggaa ttccctacga aaccggcctg ctaatatttg gcgtcagtat
     4981 cgcactctat acggcgtttg gcggctttcg cgccagcgta cttaacgata cgctacaggg
     5041 cctggtgatg ctggtcggca cgatagtgct gctggtgggc gtggtgcatg cggcgggcgg
     5101 tttacatcag gccgttgaca cgctgcacgc tctcgacccc aaactggtaa cgccgcaggg
     5161 cgccgatgac atactttctc ccgcttttat gacctctttt tgggtactgg tctgttttgg
     5221 cgtgattggc ctgccgcata cggcagtgcg ctgcatttct tataaagaca gtaaagcggt
     5281 acaccggggc attattatcg gtacgattgt cgtggcgatt ttaatgttcg ggatgcacct
     5341 tgccggcgcg ctgggtcgcg cggtgcttcc ggatctgacg gtgccggatc tggtgatccc
     5401 aacgctaatg gtgaaagttt tgccgccgtt tgccgccggg atcttccttg ctgcgccaat
     5461 ggcggcgatc atgtcaacaa ttaacgccca actgctgcaa agttccgcga cgatcattaa
     5521 agatctctat ctcaacctgc gtcccgatca gatgcaaaat gagatccggc tgaagcgtat
     5581 gtcggcagcg attacattac tgttaggcgc gctgttgctg ctggccgcgt ggaaaccgcc
     5641 agagatgatc atttggctca acctgctggc gtttggcggc ctggaagcgg tgttcttatg
     5701 gccgctggta ctgggccttt actgggagcg ggcaaacgcg gcaggcgcgt taagcgccat
     5761 gatcgtgggc ggcgtgctat atgccctgct tgccacattt aatattcagt acctgggctt
     5821 tcatccgatt gtgcccgcgt tactgttaag tttattggct tttctgatcg gaaaccgatt
     5881 cggctcttcc gcttcgcaag ccaccgtatt gtctactgat aaataaagag ttttgccatg
     5941 ccatggatcc aattgaaact gaataccacc ggcgcgaatg ctgaagagct aagtgatgcg
     6001 ctgatggaag cgggcgccgt ttccattacc tttcaggata cacacgatac gccggttttt
     6061 gagccgttgc cgggcgaaac ccgtctgtgg ggcgataccg atgtgatcgg tctgttcgac
     6121 gccgaaacag acatgaaaga cgttgtcgcg attctggagc aacatccact gctgggtgcc
     6181 ggatttgccc ataaaatcga acaactggaa gataaagact gggaacgcga atggatggat
     6241 aatttccatc cgatgcgttt tggcgagcgt ctgtggattt gtcccagctg gcgtgacatt
     6301 ccggacgaga atgccgtcaa cgtgatgctc gacccgggac tggcgttcgg tacgggtacg
     6361 caccccacca cctctttatg tctgcaatgg ctggacgggc tcgatctcaa cggcaaaacc
     6421 gtgatcgact ttggctgcgg ttcaggcatt ctggcgattg ccgcgctgaa gctgggagcg
     6481 gcaaaggcga ttggtattga tatcgatccg caagctattc aggccagtcg cgataatgcc
     6541 gaacgtaacg gcgtgtctga ccggctggag ctgtacctgc cgaaagacca gccagaagcc
     6601 atgaaagccg acgtggtcgt cgctaacatc ctggcaggcc cattacgcga actggccccg
     6661 ttaatcagcg tactgcccgt tgagggcggt ctgctggggc tttcaggtat tctcgccagc
     6721 caggcggaaa gcgtctgtga tgcttacgcc gagcttttca ctctcgaccc ggtcgtcgaa
     6781 aaagaagagt ggtgccgcat tactggccgt aagaaataat tcttgtcagc gtggtcgccc
     6841 ggccacgctt ttctccacac aactgcctta acgcctttca ggcaccgaga catcattaaa
     6901 ttcatcaaat gaatgcctga aataacttct ttgtcactat ccgtctggat aaacagctgc
     6961 taccagcgga caaacgtact ggcgcttcaa cggcccgcag ccatcgccct cgtacttagt
     7021 aaatgctgtc cgggttgttc tgcagcatcc gctaacgctc tttttagcgc agctggaaaa
     7081 atttatgcgt gccgttcatg aacacaaaag cgcatctgtg caccccttcc gactggcaat
     7141 ggagaaaaat cacgcgcagc gggaagtgat cttgtcctga aacgagacgg cgatcccatt
     7201 catttggggt aattagctta taaaaaaagc agattattcc gcttatcttg tttctggtcg
     7261 aagaaataga gagaagttac gggaatttgt aagcgcgtac aaaaccgccg acaataaata
     7321 accctatgat tttactgaat tataaattta ttttgctgtt tttaagcacg attcattgat
     7381 ctacaacagt ggattgttca aagtttggcc tttcatctcg tgcaaaaaat gcgtaatata
     7441 cgccgccttg cagtcacagt atggtcattt cttaactcat gcgcatcgga caatatcagc
     7501 tcagaaatcg cctgatcgca gcgcccatgg ctggcattac tgacagacct ttccggacgc
     7561 tgtgctatga gatgggagca ggattgacag tatccgagat gatgtcttct aacccgcaag
     7621 tgtgggaaag cgataaatct cgtttacgga tggtgcacgt tgatgagcca ggaattcgca
     7681 cggtgcaaat tgccggtagc gaccctgttg agatggccga tgccgcacgt attaacgtgg
     7741 aaagcggcgc ccagattatt gatatcaata tggggtgccc ggcgaagaaa gtgaatcgta
     7801 agctggcagg ttcagccctc ttgcagtacc cggatttagt gaagtctata ctcatcgggg
     7861 tcgtaaacgc ggtggacgtt cctgtgactc tcaagattcg caccggctgg gcgccggaac
     7921 accgtaactg cgtagagatt gcccaactgg ctgaagattg tggtattcag gccctgacca
     7981 tccatggccg cacccgcgcc tgtttgttca acggagaagc tgaatacgac agtattcggg
     8041 cagttaagca gaaagtttcc attccgatta tcgcgaatgg cgacattact aacccgcata
     8101 aagccagagc tgttctcgac tatacagggg cggatgccct gatgataggc cgcgcagctc
     8161 agggaagacc ctggatcttt cgggaaatcc agcattatct ggacactggg gagctgcttc
     8221 cgccgctgcc gctggcagag gtaaagcgct tgctttgcac gcatgttcgg gaactgcatg
     8281 acttttacgg tcaggcaaaa gggtaccgaa tcgcgcgtaa acacgtctcc tggtatctcc
     8341 aggaacacgc tccagacgac cagtttcggc gcacattcaa cgctattgag gacgccagcg
     8401 aacagctgga ggcgttggag gcatacttcg aaaattttgc gtaaacagaa ataaagagct
     8461 gacagaacta tgttcgaaca acgcgtaaat tctgacgtac tgaccgtttc taccgttaac
     8521 tctcaggatc aggtaaccca aaaacccctg cgtgactcgg ttaaacaggc actgaagaac
     8581 tattttgctc aactgaatgg tcaggacgtt aatgacctgt atgagctggt actggctgaa
     8641 gtagaacagc ccctgttgga catggtgatg caatacaccc gtggtaacca gacccgtgct
     8701 gctctgatga tgggcatcaa ccgtggtacg ctgcgtaaaa aattaaaaaa atacggcatg
     8761 aactaatttc gattagctaa ctgcttgttt aaaaaggcgc tactcggcat ggggaagcgc
     8821 cttttttata cgcattacat ggaatttggt catgaaagcg gaatgtgaac ctcagtactt
     8881 tggcgatgaa tcgaagaaga ttattcacgg tgacgcgcta acagaactta aaaaactgcc
     8941 ttctgaaagc attgacttaa tttttgccga tccgccttac aatatcggaa aagatttcga
     9001 cggtatggtg gaatcctggg acgaagcgtc ttttctggcc tggctgtatg aatgcattga
     9061 cgagtgccac cgcgtactga agaaacacgg caccatgtac atcatgaata gcacagaaaa
     9121 tatgccgtat atcgatctca aatgccgaac gctttttacc atcaaaagcc gtatcgtctg
     9181 gtcctatgat agttccgggg tgcaggcgaa aaaatacttt ggttctatgt atgaaccgat
     9241 cctgatgatg gtaaaaaacc cgaaaagcta tacctttaac cgtgacgcga ttctggtcga
     9301 gaccactacg ggcgctaagc gcgcgctaat cgattatcga aaaaacccgc cccaaccata
     9361 caatcagaaa aaagtgccgg gcaacgtctg gtcatttcct cgcgtacgtt atctgatgga
     9421 tgaatatgaa aaccatccta cgcaaaagcc cagcgcgctg ttaaaacgga tcatactggc
     9481 ctcttctaac ccgagcgata ccgtattgga ccctttcgcg ggcagtttca ccacaggcgc
     9541 tgtcgcagcg gcgtcaggtc gtaagtttat cggtattgaa ctcaataatg agtacgtaaa
     9601 aatggggctc agaagattga gcgtcacttc gcattattca gaaaatgaac ttgcaaaagt
     9661 caaaaagaga aaaacacaaa acctgtccaa aaagcagcga aatgtcggga taaacgcgct
     9721 atcttcagag aagtaaaagc attgtaagtc cgcttttcag cgtcaaaatt tcatgtatat
     9781 tcccagcacg catgggcatg aatacacagg atttgacgat gatacgtaag tattggtggc
     9841 tggttgtttt tgccgtctcc gtttttcttt ttgatgcgct tttgatgcaa tggatcgaat
     9901 tgatggcgac tgaacaggat aagtgccgaa acatggattc ggttaaccct cttaaattga
     9961 tcaattgtac cgatctggag tagcgaatcg ggcgatttaa cctatgatta tttatcaccc
    10021 ggatttcttt tatcccttat aaaaacaggg aattaaaaca cgttgaggat aaaagaaggg
    10081 gtgatactgt ctcgtcctgt tcttttcctg cataaccaat gagctaatga tacatgccgg
    10141 ttagtgagta caaccacatc cttgtggcgg tttcatttgc tgtcgctatt tttgcgtcct
    10201 ataccgcatt aaatatggcc ggacgcgtag ccggaagcgc ccgatcaaac gccagaatat
    10261 ggctaatggg cggcggcttc gcgctgggcg tcggtatttg ggagatgcat tttgtcggga
    10321 tgctggcgat ggatcacgcg atgaacatgc gcttcgatcc gttcctcacc ggcctctcca
    10381 tgctgatcgc gatcggctcc tccctgtttg cgctatggct ggttagcgct gaaaaactgc
    10441 gcctgcgccg tttactgccg ggcgcgctgg tgatgggact gggcatcagc gcaatgcatt
    10501 ataccgggat ggcggcgctg caatttgctt ccattatcgt ttggaatagc gcgtgggttg
    10561 ccctctctat cattatcgcg ctactggcgt cctgcggcgc gctgtggctc acgttccgcc
    10621 tgcgtaatga gggaacagat gtcgccctga ggcgagcagg cgccgcggta ttaatgggga
    10681 tagctatcgc cggcatgcat tacgccggca tgaaggccgc acactttccc caaaactggc
    10741 cgatggaaca tcgtggcgtc gatagcaact ggctggctgt tcttgtcagc gtggtcgcgc
    10801 tgactatcct gggtattact ctgctggttt ctttatttga cgcccggctt caggcccgta
    10861 ccgcactact tgcctcttcg ctggcgcagg cgaaccagga actggcgcag ttggcgctgc
    10921 atgatacgct cacccgttta ccaaaccggg tactccttga ggatcgtctg gaacaggcca
    10981 tcagcaaagc gaatcgggaa agcacgtctt tcgcgctact gtttatggat ctggatggct
    11041 ttaaagccgt taatgacgct tatggtcatg atattggcga taagctactg gtggcggtca
    11101 cgcatcgtct gaaccaaccg ctgagcgggc agtttaccct ggcgcggatt ggcggcgacg
    11161 aatttgtgct gcttgcggaa gtcagcgcgc ctgacgaagc ggcttccctt gccagcgcgc
    11221 tggtacattc gatagatgcg ccctttacga tagatccgta cgaactggtt gtcaccctta
    11281 gcgtgggaat agcgctctat ccgctggacg gaaaaaacga acgggaactg atgttcaacg
    11341 ccgatgccgc gatgtaccac acgaagcata cggggcgtaa cggataccat ttctttcagc
    11401 catcaatgaa tatgctggcg caaacccaac ttcagctaat gaatgacctg tggctggcgc
    11461 tggaaagaca agagctcagg ctggtgtatc agcctaaatt tcaggctcct gccggcccca
    11521 ttgtaggatt tgaggccctg ttgcgctggt atcatccaaa acaaggcgta ctgaatcctg
    11581 accagttttt accgctggcg gaaaaaacgg gtcttatcgt cactatcggt agctgggtga
    11641 tagacgaggc gtgtcgacag ctccgcgagt ggcacttaca gggatacgcc ttatggtcag
    11701 tggcggtaac tggtaatgga aaatggtcag gtctacccga ttaaaggcac gctgcaattt
    11761 tccgacgtta ccgtagatga aagcaccggc tctatcacgc tcagggcggt gttccctaac
    11821 ccgcaacaca gtctgcttcc cggtatgttt gttcgcgccc gcatcgatga aggcgtccag
    11881 cccaatgcca tccttgtccc ccagcagggc gtgacccgca cgccgcgcgg cgacgcaatg
    11941 gtgatggtgg ttaacgataa aagtcaggtc gaagcccgca atgtcgtggc gacgcaggct
    12001 attggcgata aatggctcat cagcgaaggg ttaaaaccgg gcgataaggt catcgtcagc
    12061 ggcttacaaa aagcgcgacc gggcgtccag gtgaaagcca ctaccgatgc tcctgcagcg
    12121 aaaacggcgc aataaggtaa ccgtacatgg caaacttttt tattagacgt cctattttcg
    12181 cctgggttct ggccattatc ctgatgatgg ctggcgcact ggcaataatg caacttcccg
    12241 ttgcgcagta tccaaccatt gcgccgccag cggtttctat ttctgcaacc tatcctggcg
    12301 cggatgcgca gacggtacag gatacggtta ctcaggttat cgaacaaaat atgaacggta
    12361 tcgataacct gatgtatatg tcctctacca gcgactctgc tggtagcgtg accatcactc
    12421 tgaccttcca gtccggaacc gatccggata tcgcgcaggt tcaggtgcaa aataaattgc
    12481 agctcgccac gcctttactg ccgcaagaag tccagcagca ggggattagc gttgaaaaat
    12541 ccagcagcag ctttttgatg gtcgccgggt tcgtctcgga taatccgaac actacccagg
    12601 acgacatctc tgactatgtc gcctctaaca ttaaggattc tatcagccgt ctgaacggcg
    12661 tgggcgacgt tcagctattt ggcgcacagt acgccatgcg tatctggctg gatgcgaatc
    12721 tgctaaataa ataccagctc acgccagttg acgtcatcaa ccagttaaaa gtacagaacg
    12781 accagattgc ggcaggccaa ctgggcggta cgccagcatt accgggccag cagcttaacg
    12841 cctcaatcat cgcccaaacg cgtctgaaag atccggaaga gttcggcaaa gttacgttgc
    12901 gcgtcaatac cgacggctct gtcgtccatc tcaaagatgt cgcgcgtatt gagcttggcg
    12961 gtgaaaacta taacgttgta gcgcgcatta acggtaaacc ggcctccggt ctcggtatta
    13021 aactggcgac cggcgctaac gcgctggata ccgcaaccgc aatcaaagcg aaactggcgg
    13081 aactgcagcc tttcttccct cagggaatga aggtggttta tccttatgac actacgccct
    13141 tcgtaaaaat atctatccac gaagtggtaa aaacgctatt tgaagcgatt attctggtgt
    13201 tcctggtaat gtatctgttc ttacagaata tccgggcaac cctgattcct accatcgctg
    13261 ttcctgtcgt gttgctaggc acttttgcgg tactcgccgc ctttggctat tccatcaata
    13321 ccctgacgat gttcggcatg gtactggcga tagggctgct ggttgacggt gcgatagtgg
    13381 tcgtagaaaa cgttgaacgt gtaatgatgg aggataacct ttctcccaga gaggcgacgg
    13441 aaaaatccat gtcgcagatc cagggagcgc tggtcggtat cgcgatggta ctgtctgcgg
    13501 tatttatccc gatggccttt tttggcggct cgaccggggc aatttatcgc cagttctcta
    13561 ttactattgt ttcagcaatg gcgctatccg ttctggttgc gttgattctg acgccagcgc
    13621 tatgcgctac gctgcttaaa cccgtatctg ctgaacatca cgagaaaaaa agcggcttct
    13681 ttggctggtt caataccagg tttgaccaca gcgttaacca ctatactaac agcgtaagcg
    13741 gtatcgtgcg taatacgggt cgctatctca ttatctatct acttattgta gtcggaatgg
    13801 cggttctgtt tttacgcctc ccgacctcct tcctgccgga agaagatcag ggggtattcc
    13861 tgactatgat tcagctcccc tctggcgcta cgcaagaacg tacgcagaaa gtgctggatc
    13921 aagtcactca ttactacctg aataatgaaa aagcgaacgt cgaaagcgtg tttaccgtaa
    13981 acggctttag ctttagcggt cagggacaaa actcagggat ggcatttgtc agccttaaac
    14041 cctgggaaga gcgtaacggt gaagaaaata gcgtcgaagc cgttatcgcc agagcgacac
    14101 gcgcctttag ccagattcgc gacgggttgg tgttcccctt caacatgccg gcaattgtcg
    14161 agttaggtac cgcgacaggt ttcgacttcg aactgattga tcagggagga ctcggtcatg
    14221 atgcgttaac aaaagcgcgt aatcaactcc tgggtatggt cgcgaagcat cctgatctat
    14281 tagtgcgcgt acgcccgaac gggctggaag acacgccaca gttcaagctg gatgtcgatc
    14341 aagaaaaagc acaggcgctc ggcgtttcgc tgtctgatat caacgaaacc atctccgcgg
    14401 cgttgggcgg ctattacgtt aacgacttta tcgatcgcgg acgagtgaaa aaagtatacg
    14461 ttcaggctga cgctcagttc cgtatgctgc cggaagatat caacaatctt tatgtacgca
    14521 gcgccaatgg cgagatggtg cccttctcta cctttagctc agcacggtgg atttatggtt
    14581 cgccacgcct ggaacgctat aacgggatgc cgtcaatgga actgctcggt gaagcagcgc
    14641 ccggacgaag taccggtgaa gccatgtcgt taatggaaaa cctggcttca cagctgccaa
    14701 acggtattgg ctatgactgg acaggtatgt cgtatcagga acggttgtca ggtaaccagg
    14761 cgccggcgct gtacgcaatc tcactcattg tcgttttcct ctgccttgcc gctctgtatg
    14821 aaagctggtc aattccgttc tcggtaatgc tggtcgtacc gctccggcgt ggttggcgct
    14881 ctgcttgcag cgtcattgcg cggcctgaat aatgacgttt acttccaggt tggcttgtta
    14941 accactattg gcctttctgc taaaaacgcc atcctgattg ttgagttcgc caaagatctc
    15001 atggaaaaag aaggacgtgg attgattgaa gcgacgctgg aagcatcccg tatgcgttta
    15061 cgtcctattc taatgacctc gctggccttt attctcgggg taatgccgtt agttatcagt
    15121 cgtggcgcag gtagtggggc acagaacgca gtaggcacag gggttatggg gggaatgtta
    15181 accgcaacct tattagctat cttcttcgtg ccagtattct tcgttgttgt aaaacgccga
    15241 tttaatcgcc atcatgatta accagtaaac agaggcgtct tcggacgcct tttaaacggt
    15301 acgtctttat ctccgctatt cccccctctc cgcttacctc tgcattctcc atagttttta
    15361 caattcacat gaattgagat gattcctcat gtcagccatt ttttctgtgg tggtaaaata
    15421 actctcgttt tcacagcggt tagagccagc atttacgttg ctgtactttg cgaaacgctg
    15481 attaatgagg taacaccatg aaaagactaa ttccagttgc attgcttacc accttattgg
    15541 caggttgtgc acatgattct ccctgcgtac cggtttatga cgatcaaggg cggctggttc
    15601 ataccaatac atgtatgaaa ggtacaacgc aggataactg ggagacagca ggcgctatcg
    15661 ctggcggcgc tgcggcggta gcagggttga cgatgggtat cattgcgctt tctaaatgat
    15721 acatgcaggc gcggcaatgc cgcgctttca gtaataatat aaaggtcgta aggatactca
    15781 gcgacgtaat ctattcagcc tatccccgaa agttaacacg ataaaacgct ctcttttctt
    15841 actcgcccat cccgatggta tttattctat tccttgtccg atgcagacaa aattgtagct
    15901 tgatagcatc gtaagccgca ttacaaacag gctttataca gtaagactta gagcgtggtc
    15961 attaggcgta attattacag acagtctgga tataaaccgg aacatacacg taatacatga
    16021 ggattttgag cactgtccca gggccaaact ggcaaataaa atagcctaat gggccagatt
    16081 cttagtcctc agcgaatatc tctattgctt attagaggcg taagtaaaag ccgtttgtac
    16141 atctacttca gcacggttca cattcgatgg ttcaggcgga tatatggcgg gaaatcacgt
    16201 ttactaaaac ggtttttatc cactctacga agatgttata tacccaaaat aattcgagtt
    16261 gcttaaaggc ggcaagggag tgagtcccca ggagcataga taactatgtg actggggtga
    16321 gcgacaaatc tgccgggagc agatttaaac gtcgcgtgcg acggcccgtc agggcgaggc
    16381 ccatgaatgg gccgagtaat ccgtagccaa cacataagcg acttgaagta tgaaaggtat
    16441 aaaccaaata taaaacgcgt cggcgtcatt atccgataac tttttccata gagagataaa
    16501 tgcaaaaagg cccaatcttt cgattgggcc ttttgcttta tttgatgtct ggcagttccc
    16561 tactctcgca tggggagacc ccacactacc atcggcgcta cggcgtttca cttctgagtt
    16621 cggcatgggg tcaggtggga ccaccgcgct actgccgcca gacaaattct ttttcaaatg
    16681 ccgaacttta accgtattaa gtggtgctga tacccagagt cgaactgggg acctcaccct
    16741 taccaagggt gcgctctacc aactgagcca tatcagcaca ctaaatttga tgcctggcag
    16801 tttatgaatc acttcgtgat tcacccttcg ggccgttgct tcgcaacgtt caaaagattc
    16861 gcttttgtcc tactctctgt cgagtagtga actgccccga aagttaatgc catact
//
LOCUS       DAGWFR010000080        16483 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.081, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000080 DAGWFR010000000
VERSION     DAGWFR010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 16483)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16483)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16483
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.081"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(1..1114)
                     /gene="trpCF"
                     /locus_tag="MOX77_002691"
                     /pseudo
     CDS             complement(1..1114)
                     /gene="trpCF"
                     /locus_tag="MOX77_002691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460684.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional indole-3-glycerol-phosphate
                     synthase TrpC/phosphoribosylanthranilate isomerase TrpF"
     gene            complement(1118..2713)
                     /gene="trpD"
                     /locus_tag="MOX77_002692"
     CDS             complement(1118..2713)
                     /gene="trpD"
                     /locus_tag="MOX77_002692"
                     /EC_number="2.4.2.18"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008784940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional anthranilate synthase glutamate
                     amidotransferase component TrpG/anthranilate
                     phosphoribosyltransferase TrpD"
                     /protein_id="HCA3358175.1"
                     /translation="MADILLLDNIDSFTWNLADQLRTNGHNVVIYRNHIPAQTLIDRL
                     ATMKNPVLMLSPGPGIPSEAGCMPELLTRLRGKLPIIGICLGHQAIVEAYGGYVGQAG
                     EILHGKASSIEHDGQAMFAGLANPLPVARYHSLVGSNVPAGLTINAHFNGMVMAVRHD
                     ADRVCGFQFHPESILTTQGARLLEQTLAWAQQKLEPTNTLQPILEKLYQAQTLTQQES
                     HQLFSAVVRGELKPEQLAAALVSMKIRGEHPNEIAGAATALLENAAPFPRPDYLFADI
                     VGTGGDGSNSINISTASAFVAAACGLKVAKHGNRSVSSKSGSSDLLAAFGINLDMNAD
                     KSRQALDELGVCFLFAPKYHTGFRHAMPVRQQLKTRTLFNVLGPLINPAHPPLALIGV
                     YSPELVLPIAETLRVLGYQRAAVVHSGGMDEVSLHAPTIVAELHDGEIKSYQLTAEDF
                     GLTPYHQDQLAGGTPEENRDILTRLLQGKGDAAHEAAVAANVAMLMRLHGQEDLKANA
                     QTVLDVLRNGTAYDRVTALAARG"
     gene            complement(2713..4275)
                     /locus_tag="MOX77_002693"
     CDS             complement(2713..4275)
                     /locus_tag="MOX77_002693"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component 1"
                     /protein_id="HCA3358176.1"
                     /translation="MQTPKPTLELLTCDAAYRENPTALFHQVCGDRPATLLLESADID
                     SKDDLKSLLLVDSALRITALGDTVTIQALSDNGASLLPLLDTALPAGVENEVLPAGRI
                     LRFPPVSPLLDEDARLCSLSVFDAFRLLQGVVNIPTQEREAMFFGGLFAYDLVAGFEA
                     LPHLEAGNNCPDYCFYLAETLMVIDHQKKSTRIQASLFTASDLEKQRLNARLAYLSQQ
                     LTQPAPPLPVTPVPDMRCECNQSDDAFGAVVRQLQKAIRAGEIFQVVPSRRFSLPCPS
                     PLAAYYVLKKSNPSPYMFFMQDNDFTLFGASPESSLKYDAASRQIEIYPIAGTRPRGR
                     RADGTLDRDLDSRIELDMRTDQKELSEHLMLVDLARNGLARICTPGSRYVADLTKVDR
                     YSYVMHLVSRVVGELRHDLDALHAYRACMNMGTLSGAPKVRAMQLIADAEGQRRGSYG
                     GAVGYFTAHGDLDTCIVIRSALVENGIATVQAGAGIVLDSVPQSEADETRNKARAVLR
                     AIATAHHAQETF"
     misc_feature    complement(4298..4393)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00513"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Trp leader region; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF00513"
     gene            complement(4370..4414)
                     /gene="trpL"
                     /locus_tag="MOX77_002694"
     CDS             complement(4370..4414)
                     /gene="trpL"
                     /locus_tag="MOX77_002694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_448140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trp operon leader peptide"
                     /protein_id="HCA3358177.1"
                     /translation="MAATFALHGWWRTS"
     gene            4536..5417
                     /gene="yciV"
                     /locus_tag="MOX77_002695"
     CDS             4536..5417
                     /gene="yciV"
                     /locus_tag="MOX77_002695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-3' exoribonuclease"
                     /protein_id="HCA3358178.1"
                     /translation="MGAALSDTNYAVIYDLHSHTTASDGLLTPETLVHRAVEMRVGTL
                     AITDHDTTAAIPAAREEISRCGLALNLIPGVEISTVWENHEIHIVGLNIDIAHPAMRD
                     FLAQQTHRRQARGRLIAERLEKAHIPGAWEGALRLANGGAVTRGHFARFLVECGKATT
                     MAEVFKKYLARGKTGYVPPQWCTIEQAIDVIHHSGGKAVLAHPGRYDLSAKWLKRLVA
                     HFADHHGDAMEVAQCQQSPNERTQLATLARQHHLWASLGSDFHQPCPWIELGRKLWLP
                     AGVEGVWQAWEQPQISQ"
     gene            5425..6045
                     /locus_tag="MOX77_002696"
     CDS             5425..6045
                     /locus_tag="MOX77_002696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonylcarbamoyl-AMP synthase"
                     /protein_id="HCA3358179.1"
                     /translation="MSQFFYIHPDNPQQRLINQAVDIVRKGGVIVYPTDSGYALGCKI
                     EDKGAMERICRIRHLPDGHNFTLMCRDLSELSTYSYVDNVAFRLMKNNTPGNYTFILK
                     GTKEVPRRLLQEKRKTIGLRVPSNPIALALLDTLGEPMLSTSLMLPGSDFTESDPEEI
                     KDRLEKQVDLIIHGGYLGQQPTTVIDLTNDSPVVLREGVGDVTPFL"
     gene            6146..7021
                     /gene="rluB"
                     /locus_tag="MOX77_002697"
     CDS             6146..7021
                     /gene="rluB"
                     /locus_tag="MOX77_002697"
                     /EC_number="5.4.99.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(2605) synthase RluB"
                     /protein_id="HCA3358180.1"
                     /translation="MSEKLQKVLARAGHGSRREIESIIEAGRVSVDGKIATLGDRVEV
                     TPGLKIRIDGHLISVKESAEQICRVLAYYKPEGELCTRNDPEGRPTVFDRLPKLRGAR
                     WIAVGRLDVNTCGLLLFTTDGELANRLMHPSREVEREYAVRVFGQVDESKLRDLSRGV
                     QLEDGPAAFKTIKFSGGEGINQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDI
                     PLPKGLPRGGWTELDLAQTNYLRGLVELPPETSSKVAVEKDRRRMKANQIRRAVKRHS
                     QIAGGRRSGGRNNNG"
     gene            complement(7108..7698)
                     /gene="cobO"
                     /locus_tag="MOX77_002698"
     CDS             complement(7108..7698)
                     /gene="cobO"
                     /locus_tag="MOX77_002698"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="HCA3358181.1"
                     /translation="MSDERYQQRQQKVKDRVDARVAQAQEERGIIIVFTGNGKGKTTA
                     AFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEPHGVEFQVMATGFTWETQNREADT
                     AACMAVWQHGKRMLADPLLDMVVLDELTYMVAYDYLPLEEVISALNARPGHQTVIITG
                     RGCHRDILDFADTVSELRPVKHAFDAGVKAQMGIDY"
     gene            complement(7695..8456)
                     /locus_tag="MOX77_002699"
     CDS             complement(7695..8456)
                     /locus_tag="MOX77_002699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciK family oxidoreductase"
                     /protein_id="HCA3358182.1"
                     /translation="MHYQPKQDLLQNRIILVTGASDGIGREAALTYARYGATVILLGR
                     NEEKLRRVAQHIADEQHVQPQWFTLDLLTCTAEECRQVADRIAAHYPRLDGVLHNAGL
                     LGEIGPMSEQDPQIWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRA
                     NWGAYATSKFATEGMMQVLADEYQNRSLRVNCINPGGTRTSMRASAFPTEDPQKLKTP
                     ADIMPLYLWLMGDDSRRKTGMTFDAQPGRKPGIAQ"
     gene            8694..9740
                     /gene="sohB"
                     /locus_tag="MOX77_002700"
     CDS             8694..9740
                     /gene="sohB"
                     /locus_tag="MOX77_002700"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease SohB"
                     /protein_id="HCA3358183.1"
                     /translation="MELLSEYGLFLAKIVTVVVAIAVIVLLIVNATQRKRQRGELRVT
                     NLSEQYQEMKDDLAAALMDGHQQKLWHKAQKKKHKQEAKAAKAKAKLGDIATSDKPRV
                     WVIDFKGSMDAHEVNALREEVTAVLAVAKPGDRAVVRLESPGGVVHGYGLAASQLQRL
                     RDKNIPLTVTVDKVAASGGYMMACVAEKIIAAPFAIVGSIGVVAQIPNFNRFLKSKDI
                     DIELHTAGQYKRTLTLLGENTEEGRQKFREDLNETHHLFKEFVQRMRPALDIEQVATG
                     EHWYGQQALEKGLVDEINTSDEVILGLMEGREVLNVRYMQRKKLIDRVTGSAAESADR
                     LLLRWWQRGQKPLM"
     gene            complement(9782..10033)
                     /locus_tag="MOX77_002701"
     CDS             complement(9782..10033)
                     /locus_tag="MOX77_002701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciN family protein"
                     /protein_id="HCA3358184.1"
                     /translation="MHKETQPIDRETLLLEANKIIREHEDTMAGIVATGVTQRNGVLV
                     FSGDYFLDEQGLPTPKSTAVFNMFKHLAHVLSEKYHLVD"
     gene            10436..13033
                     /gene="topA"
                     /locus_tag="MOX77_002702"
     CDS             10436..13033
                     /gene="topA"
                     /locus_tag="MOX77_002702"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000513601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HCA3358185.1"
                     /translation="MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSAA
                     KKSADSTSTKTAKKPKKDERGALVNRMGVDPWHNWDAHYEVLPGKEKVVSELKQLAEK
                     ADHIYLATDLDREGEAIAWHLREVIGGDDARYSRVVFNEITKNAIRQAFEQPGELNIN
                     RVNAQQARRFMDRVVGYMVSPLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEE
                     FWEIDANTTTPSGEALPLQVTHQNDKPFRPVNREQTLAAVSLLEKARYSVLEREDKPT
                     SSKPGAPFITSTLQQAASTRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVNM
                     VRGYIGDNFGKKYLPDNPNQYASKENSQEAHEAIRPSDVAVMAESLKDMEADAQKLYQ
                     LIWRQFVACQMTPAQYDSTTLTVGAGEFRLKARGRILRFDGWTKVMPALRKGDEDRTL
                     PAVNKGDALTLLELTPAQHFTKPPARFSEASLVKELEKRGIGRPSTYASIISTIQDRG
                     YVRVENRRFYAEKMGEIVTDRLEENFRELMNYDFTAQMEDSLDQVANHQAEWKAVLDN
                     FFSDFTQQLDKAEKDPEEGGMRPNQMVLTSIDCPTCGRKMGIRTASTGVFLGCSGYAL
                     SPKERCKTTINLVPENEVLNVLEGDDAETNALRAKRRCQKCGTAMDSYLIDPKRKLHV
                     CGNNPTCDGYEIEEGEFRIKGYDGPIVECEKCGSEMHLKMGRFGKYMACTNDECKNTR
                     KILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGIFLAANTFPKSRETRAPLVE
                     ELYRFRDRLPEKLRYLADAPQQDPEGNKTVVRFSRKTKQQYVAAEKDGKATGWSAFFV
                     DGKWVEGKK"
     gene            13444..14418
                     /gene="cysB"
                     /locus_tag="MOX77_002703"
     CDS             13444..14418
                     /gene="cysB"
                     /locus_tag="MOX77_002703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012017585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator CysB"
                     /protein_id="HCA3358186.1"
                     /translation="MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDEL
                     GIQIFARSGKHLTQVTPAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHT
                     QARYALPGVIKGFIERYPRVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVM
                     LPCYHWNRSIVVTPDHPLAATSSITIEALAQYPLVTYTFGFTGRSELDTAFNRAGLTP
                     RIVFTATDADVIKTYVRLGLGVGVIASMAVDPLTDPDLVRIDAHDIFSHSTTKIGFRR
                     STFLRSYMYDFIQRFAPHLTRDVVDTAVALRSNEEIEAMFQDIKLPEK"
     gene            14678..14839
                     /locus_tag="MOX77_002704"
     CDS             14678..14839
                     /locus_tag="MOX77_002704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001308615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YmiA family putative membrane protein"
                     /protein_id="HCA3358187.1"
                     /translation="MISDTDSMRLVMPSENQEPRRDPELKRKAWLAVFVGSALFWVVV
                     ALVIWHWWG"
     gene            14840..15010
                     /locus_tag="MOX77_002705"
     CDS             14840..15010
                     /locus_tag="MOX77_002705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000029022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358188.1"
                     /translation="MSITSERERVVAPPIQSGDDDNTPDTTVFRSVPQHWTLTPQQRA
                     FIDAFADEVSQK"
     gene            15395..>16483
                     /locus_tag="MOX77_002706"
     CDS             15395..>16483
                     /locus_tag="MOX77_002706"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460671.1"
                     /note="Catalyzes the conversion of citrate to isocitrate;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase"
                     /protein_id="HCA3358189.1"
                     /translation="MSSTLREASKDTLQAKDKTYHYYSLPLAAKSLGDIARLPKSLKV
                     LLENLLRWQDGESVTDEDIQALAGWLKNAHADREIAWRPARVLMQDFTGVPAVVDLAA
                     MREAVKRLGGDTSKVNPLSPVDLVIDHSVTVDHFGDDDAFEENVRLEMERNHERYMFL
                     KWGKQAFSRFSVVPPGTGICHQVNLEYLGKAIWSELQDGEWIAYPDSLVGTDSHTTMI
                     NGLGVLGWGVGGIEAEAAMLGQPVSMLIPDVVGFKLTGKLREGITATDLVLTVTQMLR
                     KHGVVGKFVEFYGDGLDSLPLADRATIANMSPEYGATCGFFPIDAITLEYMRLSGRSD
                     DLIELVETYAKAQGMWRNPGDEPVFTSTL"
BASE COUNT         3774 a         4218 c         4634 g         3857 t
ORIGIN      
        1 ggtgataatc gcgtgcggga agggcattgc taacgctcag cgccttccag atttgcacat
       61 tgcgcggcaa cgcctcgcgc agcgcgttga catacgcctg gtcttcgctg ccatgtagct
      121 gtacggcaga aagcgacagg acggcggctt tctggcaaac atcggcgata tcagcgttct
      181 tgaaaacgcc gacatactgc aatggcgcgc cgcttatcac ttctcgcgcc tgctcaacgc
      241 taaccgcgcg cggagatgag ggcacaaaaa tcaacccgcc atatattgcg ccagcgtcac
      301 aggccgcttt agcgtcctgg gcgcgggtca ggccgcagac tttattttcg ccaagcagca
      361 cgcgacggac ggcggcgtta agatcgtcat gcgccattaa cgcggagcca attaaaaaac
      421 cgttggcgaa gtggctcagt tcgcgtacct gaccataggt gttaatcccg gactcgctga
      481 tgacagtcac gccgtggccc agttttggcg ccagctggcg ggtgcgattc aaatcaatcg
      541 acagatcgcg cagatcgcga ttgttgatac ctaccacttt tgcgcctaac gctatcgcgc
      601 gctcccgttc ttcgtcatta ctgatctccg tgagcacgcc cattttcaga ctgtgcgcga
      661 cggcggagag ttggcgatac tgttcgtcat ccagaaccga gagcatcagt aaacaggcat
      721 cggcctgata gtaacgggca aggtagatct gatagggatc gataataaaa tccttacaca
      781 gaatcggctg cggcgcgctt tggctaacga ccggcagaaa atcgaagctc ccctgaaaat
      841 atttttcgtc ggtgagcacc gagatcgccg aggcgtaatg ttgataaata ctggcaatac
      901 gcgccggatc gaaatcgtcg cgaatcacgc cttttgatgg cgatgctttc ttacactcca
      961 gaataaaggc ggtacgcgcg ccctggagcg catcataaaa atggcgtgta cttggctgga
     1021 tctcattttg aaaactggcc agcggctgtt gctgtttgcg ggcttctact caaatcgcct
     1081 tgtctgcgac gattttcgct aaaacggttt gcattattta ccctcttgcc gccagtgcgg
     1141 tgactctgtc atatgcggtg ccgttgcgca gaacatcaag cacggtttgc gcgttggcct
     1201 tgagatcttc ctgaccatgc agacgcatca gcatcgccac gttggcggcg acggcggcct
     1261 catgcgcggc atcgccttta ccttgtaata accgcgtcag aatgtcacgg ttttcttccg
     1321 gcgtgccgcc agccaactga tcctgatggt aaggcgtcag gccaaaatcc tccgccgtaa
     1381 gttgatagct tttaatttcg ccgtcatgca gctccgcgac aatcgtcggc gcatggagcg
     1441 aaacctcatc catgccgccg ctatgtacca ccgccgcgcg ctgatagccc agtacccgta
     1501 aggtttccgc aatcggcagc accagttccg ggctatagac gccaatcaat gccagcggcg
     1561 gatgcgctgg gttgatcagc gggccgagta cgttgaacag ggttcgcgtt tttaactgtt
     1621 ggcgaaccgg catcgcgtga cggaatccgg tgtgatattt cggcgcgaac aggaaacaga
     1681 cgcccagttc atctaacgcc tgacgtgatt tatcggcgtt catatccaga ttaataccga
     1741 acgccgccaa cagatcggat gaccccgatt tgctggatac gctgcggttg ccgtgtttcg
     1801 ccactttcag tccacaggcc gccgcgacaa aggcgctggc ggtagagata ttgatactgt
     1861 tactgccatc gccgccggta ccaacgatat ccgcaaacag atagtccggg cgcgggaacg
     1921 gggcggcatt ttccagcaac gcagtggcgg cgccggcaat ttcattggga tgctcgccgc
     1981 gaattttcat gctcaccagc gcggcggcga gctgttcagg cttaagttcg ccgcggacga
     2041 ccgccgaaaa caactgatgg ctctcttgtt gcgtcagagt ttgcgcctga tagagtttct
     2101 ccagaattgg ctgtagggtg ttggtcggtt ccagcttttg ctgcgcccag gctaatgttt
     2161 gctccagtag acgcgcgccc tgtgtcgtca ggatggactc aggatgaaat tgaaaaccgc
     2221 aaacgcgatc cgcatcatga cgtaccgcca tcaccatgcc gttgaaatgg gcgttaatgg
     2281 ttagcccggc aggaacatta ctgccgacca gcgaatgata acgcgcgacc ggtagcggat
     2341 tcgccagacc ggcgaacatc gcctgaccgt catgttcaat gctggaggct ttgccatgca
     2401 ggatttctcc cgcctgaccg acataaccgc cgtaagcttc gacaatcgcc tgatgcccca
     2461 gacaaatgcc gatgatcggt aacttgccgc gtagtcgggt cagcagctcc ggcatacagc
     2521 ctgcctcgct gggaatgccc ggaccggggg agagcattag caccggattt ttcattgtcg
     2581 ccaggcgatc gataagcgtc tgcgccggaa tatggttacg gtaaatcacc acgttatgac
     2641 cgttggtccg tagctgatct gccaggttcc aggtaaacga gtcgatgtta tcgagcagca
     2701 gaatatcagc catcagaagg tctcctgtgc atgatgcgcg gtggcgatag cacgcaatac
     2761 ggcgcgcgct ttattacggg tttcatcggc ttcagactgc ggaacagagt ccagcacgat
     2821 tccggcgccc gcctgtacgg tggcgatacc gttctccacc agcgcggagc ggataacaat
     2881 acaggtgtcc agatcgccgt gggcggtgaa gtaaccgacc gcgccgccat agctgccgcg
     2941 gcgctgtcct tccgcatcgg caatcaactg catggcgcgt actttcggcg cgccgctcag
     3001 ggtgcccatg ttcatgcagg cgcgataggc gtgcagcgcg tcgagatcgt gacgcagttc
     3061 gcccactacc cgggaaacca gatgcatcac gtacgaatag cggtcaactt tggtcagatc
     3121 ggcaacgtag cgactgcccg gcgtacagat gcgcgccagg ccattgcgcg ccagatcgac
     3181 cagcatcaga tgttcggaaa gctctttctg gtcggtacgc atgtccagct caatacggct
     3241 gtcgagatct ctgtccagcg taccatcggc gcggcgaccg cgtggacggg tacccgcgat
     3301 ggggtaaatc tcaatctgac ggctggcggc gtcatatttc agcgagcttt ccggcgacgc
     3361 gccgaaaagc gtgaaatcat tatcctgcat aaagaacata tacgggctgg ggttgctctt
     3421 tttcagcacg tagtaggcag ccaacggcga cgggcagggc agtgaaaagc ggcgcgacgg
     3481 caccacctga aatatctcgc ccgcgcggat ggctttttgc aactggcgta ccaccgcgcc
     3541 gaacgcgtca tcgctctgat tgcattcaca gcgcatgtcc ggcaccggcg tcaccggcaa
     3601 cggcggcgca ggctgggtta actgttggct aaggtacgcc aggcgggcgt tgaggcgctg
     3661 tttttccagg tcgctggcgg tgaacagact ggcctgaata cgggtgcttt ttttctgatg
     3721 atctatcacc atcagcgttt ccgctaaata aaagcagtag tccgggcagt tattgccagc
     3781 ctcaaggtgt ggcagcgctt caaagccagc gaccaggtcg taggcaaaca gaccgccgaa
     3841 aaacatagcc tcccgctctt gcgtcggtat gttcaccact ccctgtaaca ggcggaacgc
     3901 atcaaatacc gacagagagc ataaacgggc gtcttcatct aataatgggc tgacgggcgg
     3961 aaagcgtaga atgcgaccgg caggcaggac ttcgttctcc acgccagcgg gcagggcggt
     4021 atccagtagc ggcaataacg aggcgccatt atcagataac gcctgaatag tgacagtgtc
     4081 acctaaagcg gtaatgcgca gcgcgctatc taccagcagc aggcttttta aatcgtcttt
     4141 actgtcgata tccgcggatt ccagcagcag cgttgccggg cgatcgccgc agacctggtg
     4201 aaaaagcgcc gttgggtttt cccggtaggc ggcatcgcag gtcaatagtt cgagcgtggg
     4261 ttttggtgtt tgcatggtta ttctcattat tttgttcaaa aaaaagcccg cttaacaggc
     4321 gggccgggta tcgtttggct gattacagct gttcatacac cgcccgctat caggaagtgc
     4381 gccaccaacc gtgtaatgca aatgtcgctg ccattttaga taccctcttc atgtgaactt
     4441 tcgtactagt taactggttc aatggaataa tgtcaacacc tatttcagta tatttgccgg
     4501 aaccgttatg atgtacatga cataccttta tctctatggg agccgccttg agcgacacga
     4561 attacgcagt gatttacgat ctgcacagtc ataccacggc gtccgatgga ctgttgacgc
     4621 cagaaacatt agtacaccgt gcggtagaga tgcgagtcgg cacgctggcg attaccgatc
     4681 atgacaccac agctgcgatt cctgcggcaa gagaagaaat ttcacgttgc gggctggccc
     4741 tgaatctgat tcccggcgtg gagatttcaa cggtctggga gaatcatgag attcacattg
     4801 tgggtctgaa tattgatatt gcgcacccgg caatgcgcga ttttctagcg cagcagacac
     4861 atcggcgtca ggcgcgtggt cggctcattg cggagcgtct ggaaaaagcc catattcccg
     4921 gcgcgtggga aggggcattg agactggcca atggcggcgc ggtgacgcgc ggccacttcg
     4981 cccgctttct ggtggagtgc ggcaaagcca cgaccatggc ggaggttttt aaaaaatatc
     5041 tcgcgcgtgg gaaaaccggt tacgttccgc cgcagtggtg tacaatagaa caagctattg
     5101 atgtcattca tcattctggc ggtaaggcgg tgttggccca cccgggacgc tacgacctta
     5161 gcgctaagtg gctgaaaaga ttagtggcgc attttgccga ccatcacggc gacgcgatgg
     5221 aagtggcgca gtgccaacaa tcacccaatg aacgcaccca actggcgacg cttgcgcgtc
     5281 agcatcattt atgggcatcg cttggatctg atttccatca gccctgcccg tggattgagt
     5341 tggggcgtaa actctggctg cccgctggcg ttgaaggcgt atggcaggca tgggaacagc
     5401 cgcaaatatc acagtgaggg aagtatgagc cagttttttt atatccatcc ggataaccca
     5461 cagcaacggc tgattaatca ggccgtcgac attgtgcgta aaggcggtgt tattgtttat
     5521 ccaaccgatt ccggctatgc ccttggttgt aaaattgaag acaaaggcgc aatggagcgc
     5581 atttgccgca tccgtcatct gccggacggc cacaacttca cgctgatgtg ccgcgatttg
     5641 tccgagttgt cgacctactc ctacgtcgac aacgtggcat ttcgtctgat gaaaaacaat
     5701 acgccgggta attacacctt tatcctgaag gggacaaaag aggtgccgcg ccgtctgttg
     5761 caggaaaagc gtaaaactat cggcctgcgc gtaccgtcaa acccgattgc gctggcgtta
     5821 ttggatacgc tgggcgaacc gatgctctcg acgtcgttga tgctgcctgg cagcgatttt
     5881 accgagtcgg acccggagga gattaaagat cggctggaga agcaggtgga tctgatcatc
     5941 cacggtggtt acctcggtca acagcctacc acggtaatcg atttgaccaa tgactccccg
     6001 gtggtgctgc gcgaaggcgt cggcgacgtt acacctttct tataagggcg taagcctgta
     6061 tactacgcgg ccttaaaatg gcgcggcaac gcgccgttca ttctcctgtt cgacgcctgt
     6121 gaaggcgaca cctgaaggaa gctctatgag cgaaaagtta caaaaagtgc tggcgcgcgc
     6181 tggccacggc tctcgccgtg aaatcgaatc cattattgaa gcgggacgtg tcagcgttga
     6241 cggtaaaatc gccacgcttg gcgatcgtgt tgaagtcact cccggtttga aaatccgtat
     6301 cgacggtcac ctgatttcgg tgaaagagtc ggcggaacaa atttgccgcg ttctggccta
     6361 ttacaaacca gaaggtgaac tgtgtacccg caatgaccct gaagggcggc caaccgtttt
     6421 tgatcgctta ccgaaactgc gcggcgcgcg gtggattgcg gtaggacgtc tggatgtcaa
     6481 cacctgcggg ctattgttgt ttaccaccga cggtgaactg gcgaaccgcc tgatgcatcc
     6541 tagtcgcgaa gttgaacgtg aatatgccgt gcgcgtgttc ggtcaggtgg atgaatcgaa
     6601 actgcgtgat ttaagccgtg gcgtacagtt ggaagatggt ccggcggcat ttaagaccat
     6661 taaattcagc ggcggcgaag gcattaacca gtggtataac gtgacgctga cggaagggcg
     6721 caaccgcgaa gttcgccgac tgtgggaagc ggtaggcgtt caggtcagcc gtctgatccg
     6781 cgttcgttac ggcgatatcc cgctgccgaa aggcctgccg cgcggcggct ggactgagct
     6841 cgacctcgcg caaacgaact atctgcgtgg tctggtagag ctcccgccgg aaacctcgtc
     6901 gaaggttgcc gtcgaaaaag accgtcgtcg tatgaaagcg aaccagatcc gtcgggcggt
     6961 aaaacgccac agccagatag ctggcggacg ccgctccggt gggcgtaata acaacgggta
     7021 atctctaccg tggtttatag gccgagagtc atcagacaag agggtttgtg ccggatggcg
     7081 gcgcaaacgc cttaatccgg cctacggtta ataatcaatt cccatctggg cttttacgcc
     7141 cgcgtcgaaa gcatgtttaa ccggacgcag ttcgctgacg gtatccgcaa aatcaagaat
     7201 atcccggtga cagccgcgac ctgtaataat caccgtctgg tgaccagggc gcgcgtttag
     7261 cgcgcttatg acctcttcca gcggtaaata gtcatacgcc accatatagg tcagctcatc
     7321 cagcactacc atatcaagca gcggatcggc cagcattcgt ttcccatgct gccaaacggc
     7381 catacatgct gcggtgtctg cctcgcgatt ttgcgtctcc caggtaaatc ccgttgccat
     7441 cacctgaaat tcgacgccat gcggttccag cagattacgc tcgccgttgg gccaggtgcc
     7501 tttaataaat tgcaccacgc ctacgttttt accgtgtcct acggcgcggg cggcagttcc
     7561 gaaagccgcc gtggttttgc ccttaccatt gccagtaaac acgataataa taccgcgctc
     7621 ttcctgtgcc tgggcgacac gggcgtcaac ccgatctttt accttctgct ggcgctgctg
     7681 ataacgttca tcactcattg ggcgattcct ggtttacggc ccggttgggc gtcaaaggtc
     7741 ataccggttt tacggcgact gtcgtcgccc ataagccaca ggtaaagcgg cataatatcg
     7801 gcaggcgttt ttaatttctg tggatcttcc gtcggaaagg cgctggcgcg catactggtg
     7861 cgcgtgccgc ccgggttaat gcagttaaca cgcagagaac ggttctggta ttcgtccgcc
     7921 agcacctgca tcattccttc agtagcaaac ttcgaggtgg cataggcgcc ccagttggcg
     7981 cgtccctgac ggccaacgct tgatgacgta aagaccagcg agccggcatc ggacttcaat
     8041 aataacggta acagcgcctg ggtgagcata aaggtggcgt taacgtttac ctgcatgaca
     8101 tcctgccaga tctgcggatc ttgttcgctc attgggccga tttcccccag taacccggca
     8161 ttgtgcagga cgccatccag gcggggatag tgcgcggcga tgcggtcggc cacttgccgg
     8221 cactcttcag cggtgcaggt cagcagatcg agcgtaaacc actgtggttg aacatgttgc
     8281 tcgtcagcaa tgtgctgcgc gacccgacgc agtttctctt cgttgcgtcc cagcagaatc
     8341 accgttgcgc cgtaacgcgc atacgtgagc gcggcttccc gcccaatgcc atcgctggca
     8401 ccagtgacca gaataatgcg gttttgcaat agatcttgtt tcggttggta atgcatggct
     8461 actcctcaac ggtgtggtgc accgtcctgc caggttgtct tatcttcgcg ttaacttttc
     8521 gggtttatgc ctgaaagcgc cttttttttc aatcagacag gggcgataac gccgtaaaat
     8581 gaacgtcttg tcatactttt tcttcctcaa caggcatacg gatgaagaga gactgacttc
     8641 gatgcctgtt gtacactgag cgcaagtcgc gttatttaat caaggtggga gtcgtggaat
     8701 tgttgtctga atatggctta tttttggcaa aaatcgtcac cgttgtggtg gccattgccg
     8761 tcattgtgct gctgatcgtg aatgctacgc aacgcaaacg tcagcgcggc gagctgcgcg
     8821 tgaccaattt gagtgagcag tatcaggaga tgaaggatga ccttgctgcg gcgttgatgg
     8881 atggccatca gcaaaaactg tggcataaag cgcagaaaaa aaagcataag caggaggcga
     8941 aagccgccaa agcgaaagcg aagctggggg acattgcgac atcggacaaa ccgcgcgtat
     9001 gggtgataga tttcaaaggc agtatggacg ctcacgaagt taatgcgtta cgcgaagagg
     9061 tcacggcggt gctggcagtg gcgaaacccg gcgatcgggc ggttgtgcgt ctggaaagcc
     9121 ccggtggcgt tgtgcacggc tatggcctgg cggcatcgca attgcagcgc ctgcgcgata
     9181 aaaatattcc gctgaccgtg acggtggata aagtcgcggc aagcggaggc tacatgatgg
     9241 cctgcgtggc ggaaaaaatt atcgcggcgc cgttcgctat tgtggggtca attggtgttg
     9301 tcgcgcaaat cccgaacttt aaccgctttc tcaaaagtaa agacattgat attgaactgc
     9361 ataccgcagg gcagtacaaa cgtaccctga ctttgttagg cgagaatacg gaagaagggc
     9421 ggcagaagtt tcgtgaagat ctcaacgaaa cgcaccatct gttcaaagag tttgtgcagc
     9481 ggatgcgtcc ggctctggac attgaacagg tcgccacggg cgaacactgg tacggtcagc
     9541 aggcgctgga gaagggactg gttgatgaga ttaacaccag cgatgaggtt atcctcggcc
     9601 tgatggaagg gcgcgaggtg ctgaatgtgc gctatatgca gcgtaaaaaa ctgatcgatc
     9661 gtgttaccgg cagcgcggcg gaaagcgcgg atcggctgct gctgcgctgg tggcagcgtg
     9721 gacaaaagcc gttgatgtaa accgctattg ccggatggca ttcagcgcca tccggcatgg
     9781 attaatcaac caggtgatac ttctcagaca gcacatgcgc caggtgttta aacatgttaa
     9841 acaccgcggt gcttttaggg gtcggtaacc cttgctcgtc taaaaagtaa tcgccgctga
     9901 aaaccagcac gccatttctc tgcgttacgc cggtggcgac aatacctgcc atcgtgtctt
     9961 catgttcccg aataattttg ttggcttcaa gcaacagtgt ttcgcgatcg ataggttgcg
    10021 tctctttatg cattttttac tccttaaaca aggagattag tctacgctga gcacttctga
    10081 tgggcaaata ttctcacagg aaattgatgg atttgtcatg ttgcgttcac tggcaagatt
    10141 tgtttttgca tgctaataaa gttgcgtatc gaattttatc aggtacagtg tgacgctttc
    10201 gtcaatctgg caacagaatt gcttgacatt cgaccaaaat tccgtcgtgc tatagcgcgt
    10261 gtgtgcaaaa aagcctgtta actcagtcac ctgagggtta catttcgtac acaaagccag
    10321 tacaaggggt tgatatccgc agacgcagag accatatatc gttgtctcgt cgccagtgga
    10381 aggtgaatca acgtgcgacg cattcctgga agaatcaact taggtaaagg tgaatatggg
    10441 taaagctctt gtcatcgttg agtccccggc aaaagccaaa acgatcaaca agtatctggg
    10501 taatgactac gtggtgaaat ccagcgtggg tcatatccgt gatttgccga ccagtggctc
    10561 agcagctaaa aagagcgccg actctacctc caccaaaacg gctaaaaagc ccaaaaagga
    10621 tgaacgtggc gctctcgtca accgtatggg ggttgacccg tggcacaact gggatgcgca
    10681 ctatgaagtg ctgcccggta aagagaaggt cgtctctgaa ctgaaacagt tggcggaaaa
    10741 agccgaccac atctatctcg caaccgacct tgaccgcgaa ggggaagcca ttgcatggca
    10801 cctgcgggaa gtgatcggcg gcgatgacgc gcgctacagt cgcgtagtct ttaacgaaat
    10861 aaccaaaaat gccattcgcc aggcgtttga acagccgggc gagctgaaca ttaacagggt
    10921 caacgcccag caagcgcgcc gctttatgga ccgcgtggta ggctatatgg tctcgccgct
    10981 gctgtggaaa aagatcgccc gtggtttgtc ggcaggtcgc gttcagtctg tcgcggtccg
    11041 tctggtcgtt gagcgcgagc gcgagattaa agcgtttgtt ccggaagagt tctgggagat
    11101 tgacgctaat acgacgacgc cgtctggcga ggcactaccg ctacaggtca cgcatcagaa
    11161 cgacaagcca ttccggccgg taaatcgcga gcagacgctt gccgccgtca gcttgttgga
    11221 aaaagcgcgc tatagcgtac tggagcgtga agacaaaccg accagcagca aacctggcgc
    11281 gccgtttatc acctccacgc tacaacaggc ggccagcacc cggctgggct ttggcgtgaa
    11341 gaaaaccatg atgatggcgc agcgtctgta tgaggcgggc tacatcacct atatgcgtac
    11401 cgactccacc aacctgagtc aggatgcggt caacatggtg cgcggctata ttggcgataa
    11461 tttcggcaag aaatacctgc cggataaccc gaaccaatac gccagcaaag aaaactctca
    11521 ggaagcgcac gaagcgatcc gtccttccga cgttgctgtc atggcggagt cgctgaaaga
    11581 catggaggct gacgcgcaga agttgtatca gctaatttgg cgtcagtttg tcgcctgtca
    11641 gatgacgcca gcacaatatg actccactac gcttaccgtt ggcgcaggcg aattccgtct
    11701 gaaagcgcgt gggcgtattt tgcgctttga cggctggaca aaagtgatgc cggcgctgcg
    11761 taaaggcgat gaagatcgca cattgcctgc cgtgaataag ggcgatgcgc tgacgctact
    11821 tgaattgacg cctgctcagc actttactaa accgccagcc cgtttcagcg aggcttctct
    11881 ggttaaagag cttgagaagc gcggtattgg tcgtccgtct acctatgcgt cgattatctc
    11941 gaccattcag gatcgcggct atgttcgcgt tgaaaaccgt cgcttctatg cggaaaaaat
    12001 gggtgaaatc gtcaccgacc ggctggaaga aaacttccgc gaattgatga actacgattt
    12061 taccgcgcag atggaagata gtctggatca ggttgcgaat caccaggccg agtggaaagc
    12121 ggtgctggat aacttcttca gcgattttac tcagcagctc gataaagccg agaaagatcc
    12181 ggaagaaggg gggatgcgtc ctaaccagat ggtgctgacc agcatcgact gtccaacctg
    12241 tggccgtaaa atgggaattc gtactgccag tacgggggtt ttccttggtt gttcaggtta
    12301 tgcgctttcg ccgaaagagc gttgtaaaac gaccattaac ctggtgccgg aaaatgaagt
    12361 tctgaacgtg ctggaaggcg acgacgccga aaccaacgcc ctgcgcgcca aacgtcgctg
    12421 tcagaagtgc ggtacggcga tggacagcta tctgatcgat ccgaagcgta aattgcatgt
    12481 gtgtggtaat aacccgacct gtgacggcta cgagattgaa gaaggcgagt tccgcatcaa
    12541 agggtatgac ggcccgatcg ttgagtgtga gaaatgtggt tccgaaatgc acctgaaaat
    12601 ggggcgtttt ggtaagtaca tggcctgtac taacgacgaa tgtaaaaata cccgtaagat
    12661 cttgcgtaac ggcgaagttg cgccgccgaa ggaagatcct gttccattgc cggaactgcc
    12721 gtgtgaaaaa tcggacgcgt actttgtgct gcgcgatggc gccgcaggga tattcctggc
    12781 ggccaatacg ttcccgaaat cacgtgaaac gcgcgcgcca ttagtcgagg agctttaccg
    12841 gttccgcgat cgcctgccgg aaaaactgcg ttatctggcg gatgcgccgc agcaggatcc
    12901 agaaggcaat aaaaccgttg ttcgctttag ccgcaaaaca aaacagcagt acgttgcggc
    12961 ggaaaaagac gggaaggcga cgggatggtc agcgttcttc gtcgacggca agtgggttga
    13021 aggtaagaaa taaccccggc ctgtcgccac tgtagtcaag cgggccgcgt aagcggccct
    13081 tttttatatc cccttcatat ttcaagtggc ttatgtgttg gctacggatt actcggccca
    13141 tctatgggcc tcgccctgac gggccgtcgc acgcgacgtt caaatctgct cccggctgat
    13201 ttgtcgctca ccccagtccc ctggttatct atgctccagg gaactcactc gcttgttgcc
    13261 tttaatcact cgaattattt tgggtatagc gggcttatta ttttatcgcg ctggctatac
    13321 agttcagata taaatgatat agtggttata gttaacatct tttttattat taaatcgtat
    13381 tagcagccca atgatgtctg cagataaacg atggcctgat ggcgctaatc tggatgatgt
    13441 attatgaaat tgcagcagct tcgttacatt gttgaagtgg ttaatcataa ccttaacgtc
    13501 tcctctaccg ctgaggggtt gtatacttcc cagccgggga tcagcaagca ggttaggatg
    13561 ctggaagatg agcttggcat ccagattttc gcccgcagtg gtaagcatct gactcaggtg
    13621 acgcccgcag gtcaggagat tattcgtatt gcgcgtgagg tgctttccaa agtcgatgcc
    13681 attaagtcgg tcgccggcga gcacacctgg ccggataaag gctcgctcta tattgccact
    13741 acccatactc aggcgcgtta cgcattgcca ggcgtgatta aaggcttcat cgagcgttac
    13801 ccgcgcgttt cgctgcatat gcaccagggg tcgccaacgc agattgcgga agcggtatcg
    13861 aaagggaacg ccgatttcgc gattgccacg gaagcgctgc atttatatga cgatctggtg
    13921 atgttgccat gctatcactg gaaccgttcg atagtggtga cgccggatca tccattggcg
    13981 gcaacgtctt ccataacgat cgaagcgctg gcgcagtatc cgctggtgac gtataccttc
    14041 ggctttaccg ggcgttccga actggatacc gcttttaatc gcgcagggtt aacgccgcgg
    14101 atcgtcttta ctgcaaccga tgcggatgtg attaaaacgt atgtcaggtt ggggctgggc
    14161 gttggcgtca ttgccagcat ggcggtcgat ccgcttaccg atcctgattt agtgcggatt
    14221 gacgcgcacg atatttttag ccacagcacc acaaaaattg gttttcgccg tagtactttt
    14281 ttacgcagct atatgtatga ttttatccag cgttttgcgc cacatctgac gcgtgatgtg
    14341 gtggatacgg cggtggcgtt gcgttctaat gaagaaattg aagcgatgtt tcaggatata
    14401 aagctgcctg aaaagtaata tcaccgtggg tttgtgtcgt agtggcatgg cagacaaagc
    14461 cgccttttgc aatatccctc gaagtattac gggtaatgat cagcaaaata gtgttgaatt
    14521 acccgtcccg ccagtttctt tttccaaata gttatcttga gtcaaaagat tgatttattc
    14581 actggcaacg attcgtaaat tgactggatt tttgactaaa gtttatttag gatttgtctc
    14641 atctgatgat taattgtacc gattgtttgg tgctgaaatg ataagtgata ccgatagcat
    14701 gaggttagta atgccttctg aaaaccagga accgcgccgc gaccctgagc tcaaacgtaa
    14761 agcatggctg gcggtttttg tgggttctgc gttgttctgg gtagtggtag cgcttgttat
    14821 ctggcattgg tggggctaag tgagcattac gtcggaacgc gagcgcgtgg tcgcgccccc
    14881 gattcaatct ggtgacgatg ataacacccc ggatacgacc gtttttcggt ctgttccgca
    14941 acactggacg ctcacaccgc agcagcgggc atttattgat gcttttgctg acgaggtgtc
    15001 acaaaaataa tattcgtctt tttattggcg ttactgtttt attaacgctg tcttattaca
    15061 ccgcagcaac cgtgtgctga gcgcttctca gtattgatta aacacagttg gtgttgccta
    15121 tgttaacgtc aaatataaag tattggtcat ggactggcgc gtttatatta tcgctactgt
    15181 tctgggccga gttaatctgg attgccgtct aatctcgtca aagcccgata atgcgttatt
    15241 tatcgggctt tttcatcttc gttcctcgcc tgttaggttt ctcctctttt agcaatttgg
    15301 gttgttatca aaacgttaca ttttgtttgt gttatcttta atacaaccct gtggagaatc
    15361 agggtaacgc aaccctgtca ttaaaggagg agctatgtcg tcaaccctac gagaagccag
    15421 taaggataca ttgcaggcca aagataaaac gtatcattac tacagtctgc cgctggctgc
    15481 caaatccctg ggcgatatcg cccgtttgcc caaatcactt aaagtgttac tggaaaacct
    15541 gttgcgctgg caggacggcg aatctgtgac tgatgaagat attcaggcgc tggccggttg
    15601 gcttaaaaat gcccatgccg atcgtgaaat tgcttggcgg cccgcccgtg tcctgatgca
    15661 ggactttacc ggcgtgcctg ccgttgtcga cctggcggcg atgcgtgaag ccgttaaacg
    15721 cctcggcggc gatacgtcga aagtgaaccc gttatcgccg gttgatctgg ttattgacca
    15781 ctctgtgacg gtcgatcatt tcggcgatga tgatgcgttt gaagaaaacg tgcggctgga
    15841 aatggaacgt aaccatgagc gttatatgtt cctgaaatgg ggaaagcagg cattcagccg
    15901 tttcagcgtg gtgccgcccg gcaccggcat ttgccatcag gttaacctgg aatacctggg
    15961 taaagccatc tggagcgaat tacaggacgg ggagtggatt gcttacccgg actcgctggt
    16021 ggggactgac tcccatacga ccatgattaa tggtctgggc gtattggggt ggggcgtggg
    16081 tggtattgaa gcggaagcgg cgatgcttgg tcagcccgtg tcgatgctta tcccggatgt
    16141 cgtcggcttt aagttaaccg gtaaacttcg ggaggggatc actgccactg acctggtgct
    16201 aaccgtcacg caaatgctgc gtaagcatgg cgtcgtgggt aaatttgttg aattttatgg
    16261 tgacggtctg gattcgctgc cgttggcgga tcgcgcgact atcgctaata tgtcgccgga
    16321 atatggcgcc acctgtggtt tcttccccat tgacgccatc accttggaat atatgcgatt
    16381 aagcggacgt agcgacgatc tgatcgagct ggttgaaacc tacgcgaagg cgcagggaat
    16441 gtggcgtaat cccggtgacg aaccggtatt taccagtacg ctg
//
LOCUS       DAGWFR010000081        16370 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.082, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000081 DAGWFR010000000
VERSION     DAGWFR010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 16370)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16370)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16370
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.082"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..123)
                     /locus_tag="MOX77_002707"
     CDS             complement(<1..123)
                     /locus_tag="MOX77_002707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462494.1"
                     /note="predicted SAM-dependent methyltransferase; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(1516)-N(2))-methyltransferase"
                     /protein_id="HCA3358190.1"
                     /translation="MQICLMDETGATDGALSVLAARWGLEHDEDNPMALVLTPQH"
     gene            complement(130..2172)
                     /gene="prlC"
                     /locus_tag="MOX77_002708"
     CDS             complement(130..2172)
                     /gene="prlC"
                     /locus_tag="MOX77_002708"
                     /EC_number="3.4.24.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020317218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptidase A"
                     /protein_id="HCA3358191.1"
                     /translation="MTNPLLTSFSLPPFSAIKPEHVVPAVTKALADCRAAVEGVVAHG
                     APYSWENLCQPLAEADDVLGRIFSPISHLNSVKNSPELREAYEQTLPLLSEYSTWVGQ
                     HEGLYNAYRDLRDGDHYATLNTAQKKAVDNALRDFELSGIGLPKEKQQRYGEIATRLS
                     ELGNQYSNNVLDATMGWTKLITDEAELAGMPESALAAAKALAEAKEQEGYLLTLDIPS
                     YLPVMTYCDNQALREEMYRAYSTRASDQGPNAGKWDNSPVMEEILALRHELAQLLGFE
                     NYAHESLATKMAENPQQVLDFLTDLAKRARPQGEKELAQLRAFAKAEFGVEELQPWDI
                     AYYSEKQKQHLYSISDEQLRPYFPENKAVNGLFEVVKRIYGITAKERTDVDVWHPEVR
                     FFELYDENNELRGSFYLDLYAREHKRGGAWMDDCVGQMRKADGTLQKPVAYLTCNFNR
                     PVNGKPALFTHDEVITLFHEFGHGLHHMLTRIETAGVSGISGVPWDAVELPSQFMENW
                     CWEPEALAFISGHYETGEPLPKELLDKMLAAKNYQAALFILRQLEFGLFDFRLHAEFN
                     PQQGAKILDTLFEIKKQVAVVPSPTWGRFPHAFSHIFAGGYAAGYYSYLWADVLAADA
                     YSRFEEEGIFNRETGQSFLDNILTRGGSEEPMELFKRFRGREPQLDAMLEHYGIKG"
     gene            complement(2335..2988)
                     /locus_tag="MOX77_002709"
     CDS             complement(2335..2988)
                     /locus_tag="MOX77_002709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000469196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HCA3358192.1"
                     /translation="MFHYGKCVVRTLFLLLVCCSLSGCLSFGLILATDKDGNRHQSTW
                     KSDTVTALSLGKDSNGKTGWVFVGEHFDYLLTQGGDNVVALLKDATIRRDKMRVKDGV
                     KFLIDTDKKEFTGEVNVTYAWVDEKDKLAAVGYGFICADGAVNCTLSVMDLKGTIHQK
                     NKEQSVTQQLSFYHPFTVEFYQYQRSMSGAKFGRVLLPVTLALDIVTMPLQLLIFSR"
     gene            3266..3709
                     /locus_tag="MOX77_002710"
     CDS             3266..3709
                     /locus_tag="MOX77_002710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000209569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358193.1"
                     /translation="MTTLLQVIVLIFIVFFIFPGRKIFRRSKHLQDGRKLISSSSLML
                     RKFGSSRGYNADYYFDMQYLYEVADGITTAIPLTSIIEAKPGTTRVSGRSVWSVDWIT
                     AEGQRKQTRFLHNYTLFNRNFATFLKTVKQANPDACITSLTLFTL"
     gene            3830..4672
                     /locus_tag="MOX77_002711"
     CDS             3830..4672
                     /locus_tag="MOX77_002711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2030)-N(6))-methyltransferase
                     RlmJ"
                     /protein_id="HCA3358194.1"
                     /translation="MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKEKPFLYLDTHAG
                     AGRYQLGSEHAERTGEYLEGIARIWQQDDLPAELEPYISVVKHFNRSGQLRYYPGSPL
                     IARQLLREQDSLQLTELHPSDFPLLRAEFQKDNRARVERADGYQQLKAKLPPVSRRGL
                     ILIDPPYEMKTDYQAVVSGISEGYKRFATGTYALWYPVVLRQQIKRMIHELEATGIRK
                     ILQIELAIRPDSDQRGMTASGMIVVNPPWKLEQQMNNVLPWLHSRLAPNGHGHTSVSW
                     IVPE"
     gene            4777..6129
                     /gene="gorA"
                     /locus_tag="MOX77_002712"
     CDS             4777..6129
                     /gene="gorA"
                     /locus_tag="MOX77_002712"
                     /EC_number="1.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003861215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-disulfide reductase"
                     /protein_id="HCA3358195.1"
                     /translation="MTKHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKELGGTCVN
                     VGCVPKKVMWHAAQIREAIHLYGPDYGFDTTINQFDWSKLIASRTAYIDRIHTSYDNV
                     LGKNNVDVIKGFARFVDAKTIEVNGETITADHILIATGGRPSHPSIPGVEYGIDSDGF
                     FALSALPERVAVVGAGYIAVELAGVINALGAKTHLFVRKHAPLRSFDPMISETLVEVM
                     NAEGPQLHTHAVPKAVVKNADGSLTLELEDGRSETVDCLIWAIGREPSTDNINLAAAG
                     VKTNEKGYIIVDKWQNTNVEGIYAVGDNTGAIELTPVAVAAGRRLSERLFNNKPDEHL
                     DYSNIPTVVFSHPPIGTVGLSEPQAREQYGDEQVKVYKSSFTAMYTAVTTHRQPCRMK
                     LVCVGPEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTVAIHPTASEEFVTMR
                     "
     gene            complement(6176..6506)
                     /locus_tag="MOX77_002713"
                     /pseudo
     CDS             complement(6176..6506)
                     /locus_tag="MOX77_002713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462499.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
     gene            complement(6439..7290)
                     /locus_tag="MOX77_002714"
     CDS             complement(6439..7290)
                     /locus_tag="MOX77_002714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015606274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HCA3358196.1"
                     /translation="MGMKETVSNIVTSQAEKGGVKHVYYVACGGSYAAFYPAKAFLEK
                     EAKALTVGLYNSGEFINNPPVALGENAVVVVASHKGNTPETIKAAEIARQHGAPVIGL
                     TWIMDSPLVAHCDYVETYTFGDGKDIAGEKTMKGLLSAVELLQQTEGYAHYDDFQDGV
                     SKINRIVWRACEQVAERAQAFAQEYKDDKVIYTVASGAGYGAAYLQSICIFMEMQWIH
                     SACIHSGEFFHGPFEITDANTPFFFQFSEGNTRAVDERALNFLKKYGQRYYPETFTEG
                     ECVIGAG"
     gene            complement(7469..8188)
                     /locus_tag="MOX77_002715"
     CDS             complement(7469..8188)
                     /locus_tag="MOX77_002715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HCA3358197.1"
                     /translation="MIEQPDSKSAKPLYKQLEDALKEAIARGEYKPGQQIPTENELSV
                     RWQVSRVTVRKALDALTRENLLTRVSGKGTFVSGEKFQRSMTGIMSFSELCQSQGRRP
                     GSRTIKSVFESVDDETKALLNMNDGEKAVVIERIRYADDVAVSLETVHLPPRFAFLLD
                     EDLNNHSLYECLREKYHLWFTHSRKMIELVYASFEVAHYLGVNEGYPLILIKSEMIDN
                     KGELSCVSQQLIVGDKIRFTV"
     gene            8513..10162
                     /locus_tag="MOX77_002716"
     CDS             8513..10162
                     /locus_tag="MOX77_002716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha,alpha-trehalase"
                     /protein_id="HCA3358198.1"
                     /translation="MLNQKLNPTPSEDLTIDVDLFYETDPCELKLDEMIEAEPEPEMI
                     EGLPASDALTPADRYLELFEHVQSTKLFPDSKTFPDCAPKMDPLDILIRYRKVRRHRD
                     FDLRRFVENHFWLPETLSSEYVSNPENSLKEHIDQLWPILTREPQDHIPWSSLLALPQ
                     SYIVPGGRFSETYYWDSYFTMLGLAESGREDLLKCMADNFAWMIENYGHIPNGNRTYY
                     LSRSQPPVFALMVELFEEDGVRGARRYLDHLKMEYAFWMDGAESLALNQAYRHVVRMP
                     DGSLLNRYWDDRDTPRDESWLEDVETAKHSGRPPNEVYRDLRAGAASGWDYSSRWLRD
                     AGRLASIRTTQFIPIDLNAFLYKLESAIANISALKGERDTEALFRQKASDRRAAVNHY
                     LWDDENGCYRDYDWRREEMALFSAASIVPLYVGMANHEQADRLANVVRSRLLTPGGIM
                     ATEYETGEQWDKPNGWAPLQWMAIQGFKRYGDDMLGDEIAHNWLKTVNHFYQEHHKLI
                     EKYHISGGTPREGGGGEYPLQDGFGWTNGVVRRLIGLYGEP"
     gene            complement(10175..11764)
                     /locus_tag="MOX77_002717"
     CDS             complement(10175..11764)
                     /locus_tag="MOX77_002717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358199.1"
                     /translation="MTNSASQATRAPFEHSLGIIRQASIEILLLLGIHTTEGKEPRWF
                     MEQLEQARLNLGGWGAVAKKLRINDAQLSQFMLQLRHLQQHVPQYDSGQEVSENQLLA
                     ALRFVTSLEHLRQQQPLLTYQTELEDPDQEAHLEAQRQLRAIELTLKALIARAWPDRA
                     SLNHYLKQHFGPDRLRQWLKQGEDQHALEGMLFSELALMVVDKKLFARHYVRIFNDAS
                     ALTLFAESRTTLRMFLDDCRLARNEVIARQPLTSAQLMLLNVQYQQIVRPIQRAYAEK
                     RTRVNPASFLLADERELRQFWETARLKDRQAGGDKHEISESIEPPRKRPPRTPEEREQ
                     LISGALWGGVGVMTLAILAGAFWLFSSSSPSSDNGQAPAMAQDEPPREAPSARETLNH
                     MGITWDAFTMRAAIERNDTRVTALFLQGGMNWQLAWTEQAFAAGHTEVLQLLLRYPAL
                     MDEVKPCRRFITTLSHDMSSGAPLTAMHKTYLQTFCTVPAVVTRQQYDTEQAQLRAQA
                     RPSADNKKWLKIQSAIYDAIH"
     gene            12045..12401
                     /locus_tag="MOX77_002718"
     CDS             12045..12401
                     /locus_tag="MOX77_002718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme"
                     /protein_id="HCA3358200.1"
                     /translation="MPHISSRFSSACIAFIKQWQGLSLEKYRDRQGNWVIGYGHMLTP
                     DETLTFITPDQAEAFLLDDLNSCDMLLQNCLPELNDRFQRETLIALMFSIGHQRFLSL
                     INTDDISQPEISGLRI"
     gene            complement(12407..13009)
                     /locus_tag="MOX77_002719"
     CDS             complement(12407..13009)
                     /locus_tag="MOX77_002719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HCA3358201.1"
                     /translation="MQVIMFDRQSIFIHGMKISLQQHIPGISIQSVGQAEELWQKIES
                     APDALVMLDSGLDAEFCREVLQRTAQQFPEVKIIITAMDGSQKWLHEVMQFNVQVVVP
                     RDSDAETFVLALNTVARGMMFLPGDWLNSTELESHDIKALSARQREILQMLAAGESNK
                     QIGRALNISTGTVKAHLESLYRRLDVKNRTQAAMMLNESN"
     gene            13640..14539
                     /locus_tag="MOX77_002720"
     CDS             13640..14539
                     /locus_tag="MOX77_002720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCA3358202.1"
                     /translation="MDKIYAMKLFVRVAERESFSRAAEDIGLPKGSVSRQIQALEHQL
                     GIRLLHRTTRRVQLTQDGMVYYERAKDLLSNLDELEGLFQPDPASISGKIRVDIPPGL
                     ANSLIMPRLLTFLHQYPGIALELCSSDRQVDLLREDFDCVVRTEPLHAPGILTRPLGK
                     LRRVNCASPQYLARFGYPENLDDLASHAMVHYSLTPGVSSPGFAFETPHGMQWVKTGG
                     MLTVNSTETWHTACLAGLGIIQTPRIAVREALRAGALIEILPQYRAAPLPVTLHYPHR
                     RNLSRRVHLFMVWLTETIKEAAE"
     gene            14612..15640
                     /gene="yhjD"
                     /locus_tag="MOX77_002721"
     CDS             14612..15640
                     /gene="yhjD"
                     /locus_tag="MOX77_002721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inner membrane protein YhjD"
                     /protein_id="HCA3358203.1"
                     /translation="MTQENDVKRPIQELEHDPIQKIETQPHDAPEKNEKANQALHSVT
                     TLMQKIQRQPMVAHLIRATERFNDRLGNQFGAAITYFSFLSMIPIMMVSFAAAGFILA
                     SHPNLLEDIFSKILMNVSDPTLASTLKNTINTAVQQRTTVGLVGLGIALYSGVNWMGN
                     LREAIRAQSRDVWERKPQDQEKIWLKYLRDFISLIGLLIALIITLSITSIAGSAQQMI
                     ISALYLDSIEWLKPAWHLIGLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFIAAI
                     GFEVIKIIMTYTLPSLVKSPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDP
                     RMPGKTQR"
     gene            15991..>16370
                     /locus_tag="MOX77_002722"
     CDS             15991..>16370
                     /locus_tag="MOX77_002722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3358204.1"
                     /translation="MQATATTLDHEQEHVPVNSRNKVVIASLIGTAIEFFDFYIYATA
                     AVIVFPLIFFPQGDPTAATLQSLATFAIAFVARPIGSALFGHFGDRVGRKVTLVASLL
                     TMGISTVIIGLLPGYATIGIFAPLL"
BASE COUNT         3901 a         4402 c         4064 g         4003 t
ORIGIN      
        1 atgttgcggc gtcaatacca gcgccatcgg gttgtcttcg tcatgctcca gtccccagcg
       61 ggcagccaga acagataagg cgccgtctgt ggcgcccgtt tcatccatta agcagatttg
      121 cacgtaaaat cagcctttaa tcccgtaatg ctccagcatc gcgtccagct gtggttcacg
      181 gccacggaag cgtttaaaga gttccatcgg ctcttcagaa ccaccgcgag tcaggatgtt
      241 atcaaggaac gactgaccgg tctcacggtt gaaaatgcct tcctcctcaa agcgagaata
      301 agcgtccgcc gccagtacgt cggcccacag atagctgtag tagcctgccg catagccgcc
      361 agcaaagata tggctgaacg catgtgggaa acggccccat gtcggtgacg gcaccacggc
      421 gacctgtttt ttaatttcaa agagcgtatc aagaattttc gctccttgct gcgggttaaa
      481 ttccgcatgc agacggaaat caaacagacc gaactccagc tgacgcagaa taaacagcgc
      541 cgcctgatag tttttcgccg ccagcatttt atccagcagt tccttcggca gcggttcgcc
      601 ggtctcatag tggccggaga taaacgccag cgcttctggc tcccagcacc agttttccat
      661 aaactgactt ggcagttcga ccgcatccca cggcacgccg ctgataccgg agaccccggc
      721 ggtctcaatg cgggtcagca tatgatgcag gccatgacca aactcgtgga acagggtgat
      781 cacttcgtca tgggtaaaca gagcgggttt accgttcacc ggacggttga aattacaggt
      841 cagataagcg accggctttt gcaatgtgcc atccgcttta cgcatctggc cgacacagtc
      901 gtccatccac gccccgccgc gtttgtgttc gcgcgcgtac aggtcaaggt agaagctgcc
      961 gcgcagctcg ttattttcgt catacagttc gaagaaacgc acctccgggt gccagacatc
     1021 aacatcagta cgctctttgg cggtgatgcc gtaaatacgt ttcaccactt caaacaggcc
     1081 gttcacggct ttgttttccg ggaagtacgg gcgtagctgc tcatcgctga tgctgtacag
     1141 gtgctgtttt tgcttttcac tgtagtacgc gatatcccat ggttgcagtt cctcaacgcc
     1201 aaattcggct ttggcgaagg cgcgcagctg ggccagctct ttttccccct gcggacgggc
     1261 gcgtttcgcc agatcggtta agaaatcgag cacctgctgc ggattttccg ccatcttggt
     1321 ggccagtgac tcatgggcat aattttcgaa gcccagcagt tgcgccagtt catggcgcag
     1381 cgcaagaatt tcttccatca ccgggctgtt atcccactta ccggcgttcg gcccctgatc
     1441 ggaggcacga gtggaatagg cgcgatacat ctcttcacgc aacgcctggt tgtcgcagta
     1501 ggtcatcact ggcagatagc tcgggatatc cagagtcagc aggtaacctt cctgctcttt
     1561 ggcttccgcc agggctttag cggcggcgag cgcgctttcc ggcattcccg ccagctcggc
     1621 ttcgtcggtg atgagcttcg tccagcccat ggtggcatcg agcacattat tgctgtactg
     1681 gttgcccagc tcagacaggc gggtggcaat ttcaccgtaa cgctgctgtt tctctttcgg
     1741 caggccgatg ccggacagtt caaaatcacg cagcgcgtta tcaaccgctt tcttctgcgc
     1801 ggtattcaga gtggcgtaat gatcgccgtc gcgcaggtcg cggtacgcgt tgtacagtcc
     1861 ttcatgttgc ccaacccagg tgctgtattc cgacagcagc ggtaacgtct gttcgtaggc
     1921 ttcacgcagc tccgggctat ttttcaccga gtttaagtgg ctaattggcg agaaaatacg
     1981 ccccagaaca tcgtcggctt ccgccaacgg ctggcagagg ttttcccagc tatacggcgc
     2041 gccatgcgcc acaacgcctt ctaccgccgc ccggcaatcg gccaacgctt tggtgaccgc
     2101 aggcaccaca tgctccggtt taattgcaga aaaaggcggc agtgaaaaag acgttagtaa
     2161 tggattggtc atatgcgcag tcctggtcta aaaaagaaat gaagcgctct atcgcgcttt
     2221 cgctatggat ctagaatggg ggatagttgg gggaatttca atgatggtgg gcgctcattt
     2281 cacccgtgca gcaacgccag catccgaacg taggcattgc tgctgaatcc aattttaacg
     2341 actgaagatc agtagctgta gcggcatagt gacaatatcc agcgccaaag ttaccggcag
     2401 caacactctg ccaaattttg ccccggacat actgcgctga tactgataga actcaacggt
     2461 gaaaggatga tagaacgata gctgctgcgt aacgctctgc tctttatttt tctgatggat
     2521 agtccctttc aggtccatga cggatagcgt gcaatttacc gcgccgtctg cacaaataaa
     2581 cccgtagcct accgccgcca gtttatcttt ctcgtccacc caggcgtaag tcacattgac
     2641 ttcacccgta aactccttct tatctgtatc aatcaggaat ttaacaccat cctttactcg
     2701 cattttatcc cggcgaatag tcgcatcttt taacagcgcc accacattat cgccgccctg
     2761 ggtcaacagg tagtcaaaat gttcgccaac aaacacccag cccgttttcc cgttgctatc
     2821 tttacctaag gaaagcgcgg taacggtatc cgatttccag gtagactgat gacgattgcc
     2881 atctttatcg gtggcaagta tcagcccaaa tgaaagacag cccgacagcg aacagcaaac
     2941 cagtaataaa aacaacgtgc gaacgacaca ttttccataa tggaacatca atgaatcctt
     3001 tcttttctat tattagcgct atcgttttaa tcaaataaac aaggtaaaac cagcactatc
     3061 atcataataa aaacgatttc agaataagac ccgacagggg taagtcggtg gacgcgtcgc
     3121 ggcatgatta gcgttaaatt cagataggct tttcatgggt gtttttctga aaacagggcc
     3181 gtgacatcaa tcgctgtcat ttttgcgcaa actgcccatg tataatattc tcaacttttt
     3241 cgtttctgga atacaaggat tgtatatgac cacgttatta caggttattg tactgatatt
     3301 tattgttttc tttattttcc ctgggcgaaa aattttccgt cggagtaagc atctgcaaga
     3361 tggccgtaaa ttaatttcat cttcttcgct gatgctgcga aaatttggca gttctcgcgg
     3421 ctataacgcg gattactact ttgacatgca gtacctctat gaggtcgcgg acggtatcac
     3481 caccgcgata ccactcacca gcattattga ggcgaaaccg ggaacaacga gagtcagtgg
     3541 tcgttcagtc tggtcagtcg actggataac agcggaaggg caaagaaaac agacgcgctt
     3601 ccttcataac tacaccctat tcaatcgaaa ttttgccacc ttccttaaga ccgtgaaaca
     3661 ggccaatcca gacgcctgca tcacttcgtt gacgttattt acgctctgac gccacagcct
     3721 acttgttttt cctcctggcc aacggcgata aaagcgcaag agcggtaatc tctacggatc
     3781 tgcggtaaac tatcggctaa cttgtttact tcccggaata tctgcatcca tgctcagtta
     3841 tcgtcacagc tttcacgctg gcaaccacgc cgacgtcctt aaacataccg ttcagagcct
     3901 gatcatcgag tcgctaaaag agaaagaaaa accgtttctc tatctggaca cgcacgcggg
     3961 cgcggggcgt tatcagttgg gcagcgaaca tgctgaacgt accggagagt atctggaagg
     4021 catcgcccgt atctggcagc aggacgatct gcccgccgaa ctggaaccgt atattagcgt
     4081 cgtaaaacat ttcaaccgca gcgggcagtt acgctactat ccgggctccc cgttaatcgc
     4141 ccgccagttg ctgcgtgagc aggacagtct gcaactcacg gaattgcatc ccagcgactt
     4201 cccactgttg cgcgcggagt ttcaaaaaga caaccgcgcc cgcgtggaac gcgctgacgg
     4261 ctatcagcaa ctgaaagcca aattgccgcc ggtttcccgc cgcggtctga ttctcattga
     4321 cccgccttat gaaatgaaaa ccgattacca ggcggtagtc agcggcatca gcgagggtta
     4381 taaacgtttc gccaccggta catacgcgct atggtatccg gtggtactcc gccagcaaat
     4441 taagcgcatg attcatgagc tggaggccac cggcatccgt aaaatcctgc aaattgagct
     4501 ggcgatccgc ccggacagcg atcagcgcgg gatgacggcg tccggtatga tcgtggttaa
     4561 cccgccgtgg aaactggagc agcagatgaa caacgtgcta ccgtggctgc acagcaggtt
     4621 ggcgccaaac ggtcacggac acacttcggt aagctggatc gtgccggagt aatcacagcc
     4681 atcggtggaa cctttcacct tcaggtatac aatcgcgaat attttggcgg gtagcgcaga
     4741 atctatccgt ccgacaacga acataaagga gcggtcatga ccaaacacta tgattacatc
     4801 gctatcggcg gcggcagcgg cggtatcgcc tcgattaacc gcgccgctat gtacggccag
     4861 aaatgcgcgc tcatcgaagc caaagagctg ggcggcacct gtgttaacgt gggctgcgtg
     4921 ccgaagaaag tgatgtggca tgccgcgcag attcgtgaag cgattcatct gtatggcccg
     4981 gactacggtt ttgacaccac gattaatcag ttcgactgga gcaagctgat tgccagccgt
     5041 accgcgtata ttgaccgcat ccatacttca tacgacaacg tgctgggcaa aaataacgta
     5101 gatgtgatta aaggctttgc ccgctttgtc gatgccaaaa ccattgaagt gaacggcgaa
     5161 accatcaccg ctgaccatat tttgatcgct accggcggcc gtccgagcca tccgagcatt
     5221 ccaggcgtgg aatacggcat tgattccgac ggtttctttg cgctatctgc cttgccggag
     5281 cgcgtcgcgg tggtaggcgc aggttatatc gccgttgaac tggctggcgt tatcaacgcg
     5341 ctgggggcga aaacgcatct gtttgtccgt aaacatgcgc cgctgcgcag ttttgacccg
     5401 atgattagcg aaacgctggt tgaggtgatg aacgccgaag gcccgcaact gcatactcac
     5461 gccgtgccga aagcggtggt gaaaaacgcc gacggcagtc tgactctgga actggaagat
     5521 ggccgcagtg aaaccgttga ttgcctgatc tgggccattg gtcgcgaacc gtcgaccgac
     5581 aatattaatc tggcggcagc gggcgtgaaa accaatgaaa aaggttacat catcgttgat
     5641 aaatggcaga acacgaacgt agaaggcatt tacgccgttg gcgacaatac tggcgcgata
     5701 gaactaacgc cagtcgccgt cgccgccggt cgccgtctct ccgagcgcct gtttaacaac
     5761 aagccggacg agcatctgga ctacagcaac atcccgaccg tggtctttag ccatccgcct
     5821 atcggcactg tcgggttaag cgagccgcag gcgcgcgagc agtacggcga cgagcaggtg
     5881 aaagtctata aatcatcgtt taccgctatg tataccgcgg tgacgacgca ccgccagccg
     5941 tgccgtatga agctggtctg cgtcgggccg gaagaaaaaa ttgtgggtat ccacggtatc
     6001 ggcttcggca tggatgaaat gttgcagggc ttcgcagtgg cgctgaagat gggcgctacc
     6061 aagaaagact tcgataatac cgtcgctatt cacccgaccg catcggaaga gtttgtgacc
     6121 atgcgttaat atcttgtgcg cccatcttcg agggtgggcg cacaggcctt catgattaat
     6181 acgtactgaa ataactctgg atcagttccg gattacgcgt ctgagttaat gccatcatca
     6241 gtaacacccg cgccttcgcc gggttgagcg agtcagacac cagccctggc tgtccttgcg
     6301 ccatcggcgc tgattgccga cgcgggccgc attgcagcgg taaacaccac cggtttgtcg
     6361 cttttcacgg tcaaattaag aaagtaggcg gtttcatcga gcgtgtcagt gccatgagta
     6421 atgaccacac cgtcaacatc atcccgcgcc aataacgcat tcaccttctg tgaaagtttc
     6481 aggataatat cgctggccat attttttcag gaagtttaac gcgcgttcat ccaccgcccg
     6541 cgtattgccc tcggaaaact ggaagaagaa aggcgtattc gcatcggtaa tttcaaaggg
     6601 cccgtggaaa aactcaccgc tatgaataca ggcggaatgt atccattgca tttccataaa
     6661 gatacagatg ctctgtaggt aggctgcgcc atagcccgcg ccgctggcga cggtgtaaat
     6721 gactttatcg tctttatatt cctgcgcgaa cgcctgcgca cgctccgcta cctgctcgca
     6781 agcacgccag acgatacggt tgattttgct gacgccatcc tgaaaatcgt cgtagtgcgc
     6841 atacccttcc gtctgctgga gcagttcgac cgcactcagc aggcctttca tcgttttctc
     6901 tccggcaata tctttaccgt cgccaaacgt gtacgtttcc acatagtcgc aatgcgccac
     6961 caacggtgaa tccattatcc aggttaaacc aatgaccggc gcgccgtgct gacgggcgat
     7021 ttcagccgct ttaattgtct ctggcgtatt acctttgtgg gaggcgacaa ccacaacggc
     7081 attttctccc agcgctaccg gcgggttgtt aataaattct ccgctgttat acagaccgac
     7141 agtcaacgct ttcgcttctt tttctaaaaa tgctttcgcc ggatagaacg ccgcataaga
     7201 accgccgcac gccacgtaat agacgtgttt aacgcctcct ttctctgcct ggctggtcac
     7261 aatattgcta actgtctctt tcatacccat catgctttcc tctggttcca tcaatgatac
     7321 aggcgaggat tcgccataaa tgactcataa tgtattatta tttttatatg atatttaaag
     7381 acatttgatc aagatggaaa ccaaaaaaaa tcgggatccg cgatctggat cccgattcag
     7441 cctgctcttc gttagcgtaa tgctgacatc atacggtaaa ccgtatttta tcgccgacaa
     7501 tcaactgttg cgaaacgcag gagagttctc ctttgttatc aatcatttca ctttttatca
     7561 ggatcagcgg ataaccctcg ttaacgccaa gataatgggc gacttcaaag ctggcataaa
     7621 ccagttcgat catcttacgg gagtgggtaa accataaatg gtatttctcg cgtaagcatt
     7681 catacaaaga gtgattatta agatcttcgt ccagcaaaaa cgcaaaacgt gggggaagat
     7741 gtacggtttc cagcgatacc gccacatcgt cggcatagcg gatacgttca atgacgaccg
     7801 ctttttcgcc atcgttcata ttcagtaacg cttttgtctc atcgtctacc gattcaaaaa
     7861 cggatttgat ggtgcgtgac cccgggcgac gtccctggga ctggcataac tcgctgaaac
     7921 tcatgatgcc ggtcatgcta cgctgaaatt tctcaccaga aacaaaggtg cctttgccgg
     7981 agacacgggt cagcaaattt tcacgcgtca gcgcatccag cgccttacgg accgtgaccc
     8041 tgctcacctg ccagcgcacg ctcagttcat tttccgtcgg gatctgctgg cctggtttat
     8101 actctccacg cgcaatagcc tcttttaagg cgtcttcaag ctgcttataa agcggtttgg
     8161 cgcttttact gtcgggttgc tcgatcattt gtatccattt gtattatcat ggtgccatag
     8221 cttgtattat aactatttac gttacctttg tttgtgaatc cacgccatgt ggtgacgtag
     8281 tgataccact atgaaacgaa tgttctgatt ttaggtctga gggaggcgtc atgaaaatag
     8341 gattttcgca atactattca gtaagttatg aagtgttttt ttgagagata aattgcaaaa
     8401 tgtgatctac cgcacacttt gccactcagg tatcgaagcg aatgtctacg cttaatagac
     8461 agccgggcaa cacccgtatc ttttacgacg caagccggag gtccttgtca ttatgctcaa
     8521 ccagaaatta aaccccacgc cttctgaaga tctgactatt gatgtcgatc tgttttatga
     8581 aacagacccg tgcgagttaa agctggatga aatgatcgag gcggaaccgg agccggagat
     8641 gatcgagggg cttcccgcct ctgacgccct gacccctgcc gatcggtatc tcgaactgtt
     8701 cgagcatgta cagtcaacaa aactgtttcc agacagtaaa acgttcccgg actgcgcgcc
     8761 gaagatggac ccgcttgata tcctgatccg ctaccgtaag gtcagacgcc accgtgattt
     8821 tgacttacgc cgcttcgtcg agaaccattt ctggctaccg gaaaccttat ccagcgagta
     8881 tgtctctaac cccgaaaact cgctcaaaga acatattgac cagctttggc cgatactgac
     8941 gcgcgaaccg caggatcata ttccgtggtc ttcgctgctg gcgctgccgc aatcctatat
     9001 cgtgccggga ggccgtttta gcgaaaccta ttattgggac tcttatttta ccatgctggg
     9061 tctggcggaa agcgggcgcg aagacttact taaatgtatg gcggataatt tcgcctggat
     9121 gattgaaaac tatggtcata ttcccaacgg caaccgcacc tattatctga gccgctcgca
     9181 gccgccggtt ttcgccctga tggttgaact gttcgaagaa gatggcgtgc gcggcgcgcg
     9241 gcgttatctc gaccatctca aaatggaata cgccttctgg atggacggcg ccgaatcgct
     9301 ggcgctcaac caggcttatc gccacgttgt gcggatgccg gacggttccc tgctgaaccg
     9361 ctactgggac gatcgcgaca cgccgcgcga cgagtcctgg ctggaagatg tcgaaaccgc
     9421 aaaacattcc ggtcgtccgc ccaatgaagt ctaccgggat ttgcgcgccg gggcggcgtc
     9481 cggctgggac tattcttcac gctggctacg cgatgcgggc cggcttgcca gcatacgtac
     9541 aactcagttt atccctatcg atttgaacgc ttttctgtat aaactggaga gcgctatcgc
     9601 caatatttca gcgctgaaag gcgaacgtga caccgaggcg ctatttcgcc agaaagccag
     9661 cgatcgacgc gccgccgtga accattattt gtgggatgat gaaaacggct gttatcggga
     9721 ctatgactgg cgacgcgaag aaatggcgct cttttccgcc gccagtatcg tgccgctgta
     9781 tgtcggtatg gcgaaccatg agcaggccga ccgtctggca aatgtagtac gcagccgtct
     9841 gttaacgccc ggcgggatta tggcgaccga atacgaaacc ggcgaacagt gggataaacc
     9901 gaacggctgg gcgccgctgc aatggatggc gattcagggc ttcaaacggt atggcgacga
     9961 tatgctgggc gatgaaatcg cccataactg gttaaaaacg gtgaaccatt tttatcagga
    10021 gcaccataaa ctgatcgaga aataccatat ttccggcggt acgccccgcg aaggcggcgg
    10081 gggcgagtat ccgctacagg atgggttcgg ctggaccaat ggcgtggtgc gccgcctgat
    10141 tggcctttac ggagagcctt aacctgctcc gggctcagtg aatcgcatca taaatggctg
    10201 actgaatttt cagccatttt ttattgtctg cgctgggccg ggcctgagcg cgcagctggg
    10261 cctgctccgt atcgtactgc tggcgcgtca caacagccgg aacggtgcaa aacgtttgca
    10321 aataggtttt atgcatcgcg gtcagcggcg cgccgctcga catgtcatga cttaacgttg
    10381 tgataaatcg tcggcagggt ttgacctcat ccatcagcgc gggataacgc aacaacagtt
    10441 gcagcacctc ggtatgtcct gccgcaaacg cctgctccgt ccacgcgagc tgccagttca
    10501 ttccgccctg gaggaacagc gccgtcaccc gcgtatcatt gcgctctatc gccgcccgca
    10561 tggtaaacgc atcccaggta atccccatat gattgagcgt ttcccgcgcg gaaggcgcct
    10621 cgcgcggcgg ttcatcctgc gccattgcgg gagcttgccc gttatcggag cttggcgatg
    10681 acgaactaaa tagccagaac gcgcccgcca gtatcgccag cgtcatgacg ccaaccccgc
    10741 cccacaaagc gccggaaata agttgctcac gctcttcagg cgtacgcgga ggccgcttac
    10801 gcggtggttc tatgctctcg ctaatctcat gcttatctcc cccggcctgc cgatctttaa
    10861 gccgcgcggt ttcccagaac tggcgcaatt cacgttcatc cgccagcaga aacgaagcgg
    10921 gattcacgcg ggtacgtttt tcggcatagg cgcgctggat gggccgaacg atttgctgat
    10981 actgaacgtt tagcagcata agctgcgctg aggtgagcgg ctgcctggcg ataacctcgt
    11041 ttcgcgcgag gcggcaatca tccagaaaca tacgcagagt ggtgcgcgac tcggcgaaca
    11101 gcgttaacgc tgaggcgtca ttaaaaattc tgacgtaatg acgagcaaac aattttttat
    11161 cgaccaccat aagcgccagt tcgctaaaca acatgccctc cagcgcatgt tgatcttctc
    11221 cctgttttaa ccactggcgc aaacggtccg ggccaaaatg ttgcttgagg tagtgattca
    11281 gggacgcccg atccggccat gcgcgcgcaa taagcgcttt taacgtcagt tctatcgccc
    11341 gaagctgacg ctgcgcctca agatgcgcct cctggtcggg gtcttccagc tcagtttgat
    11401 acgtcagtag cggctgctgc tgacgtagat gttccagcga ggtgacaaaa cgcaacgcgg
    11461 caaggagttg attttcgctc acctcttgcc cgctgtcata ctggggaaca tgctgctgaa
    11521 gatgacgcag ttgcagcata aactggctca actgcgcgtc atttatccgc aattttttcg
    11581 ccaccgcgcc ccaaccgccc aggttaagac gcgcctgctc aagttgttcc atgaaccacc
    11641 ggggctcttt tccctctgtg gtatgaatac ccagcagcag caggatttct attgatgcct
    11701 ggcggataat ccccaggcta tgttcaaaag gcgcgcgtgt cgcctgcgaa gcgctattcg
    11761 tcattatctt ccctaaaaag acgatcccgc gacgagatct tcgttttctt ttaattatgt
    11821 tttttcatag atataacaga tttagccaca tttcagtgac ttaatcttaa tgattgcaaa
    11881 tttataagaa gatcggttac taaccaaaaa catcagtttt tcattctgtc aacgcggcgt
    11941 gacgctgaac ggcatagacc ttttccctgc ctgcgtttgg ccgtctgacc gctagccacg
    12001 cgtgcagcac actttataat cgcgcttttt atgagaaaga tgccatgccg cacatttcat
    12061 ctcgctttag ctccgcctgc atcgcgttta ttaaacagtg gcagggtctg tcgctggaaa
    12121 agtatcgcga tcggcagggt aactgggtga ttggttacgg gcatatgttg acgccggatg
    12181 agacgctgac gttcattacg cccgaccagg cggaggcatt cttgctggat gacctcaata
    12241 gctgcgatat gctgctacag aattgcttgc cggaacttaa cgatcggttt caacgcgaaa
    12301 cgcttattgc gctgatgttc agcatcggac atcagcgttt tttatcatta atcaatacgg
    12361 atgatatttc acagccagaa ataagcggac tgcgaattta acgtcgttaa ttcgattcat
    12421 ttaacatcat ggcggcctgg gtacgatttt ttacatccag ccgccggtaa agcgactcca
    12481 gatgcgcttt aaccgtcccg gtactaatat ttaacgcccg cccaatttgt ttatttgatt
    12541 ctcctgcggc aagcatctgt aaaatttccc gctggcgggc gcttaacgct tttatatcat
    12601 gggactccag ctccgttgaa tttaaccaat cccccggtaa aaacatcatc ccgcgagcga
    12661 cagtattgag cgcaaggaca aaggtttcgg catcagaatc gcgtggcacc acgacctgaa
    12721 cgttaaattg catgacttca tgcagccact tttgactgcc atccatcgcc gtgataataa
    12781 tcttcacctc cggaaattgc tgcgcggttc tttgtaacac ctcgcggcaa aattcagcat
    12841 ccaggccgct atccagcatg accagcgcat ccggcgcgct ttctattttt tgccagagtt
    12901 cttctgcctg accgacactc tggatactta ttcctggaat gtgctgctgc aaactgattt
    12961 tcattccatg aataaatatt gactgcctgt caaacatgat tacctgcatt acttttctcc
    13021 acctgggtaa gataatagtc tcaagatgag gaagggtatt acccgtaggg taaaataaga
    13081 agtcgccatt tggtataggc cattttaccg atagtcattg gttgaggaag agaaaggtta
    13141 tgaatattta cagcttcaac atcgggatta cagaattcgc taacattagc gttttaaagt
    13201 aaggaatatc ttattagtac aaacagacag ggctaatttg aatattaatt taatgaagag
    13261 tacgcctggc gcgtcacaaa ggaaatatct gcttttcgcc ttatgtgtta caaaaaataa
    13321 agtagcacat tttgttaaaa aatagccaat ccgcctgaaa accgcgacga tgggtcaatg
    13381 acaataccgt atatgtacat gcatttctct ctcccactac acccgcggct atcagcgtgt
    13441 tttaccgctc tcgtcccgtt tatcggcttt ttggcgctaa aatgcctagc cggaaggcga
    13501 taaatccgcc gcgcaacgcg atcagacgta ttcgtcacgc gagcaatgat tgcgaaaggg
    13561 cttattagat gctagaaaat caataaaacc agccgcttca gcgtcactgt ttcaataaaa
    13621 acaataatag agcctgatga tggataaaat atatgcaatg aaattgtttg tgcgcgtggc
    13681 ggaacgggaa agtttttccc gcgcagcaga agatatcggc cttcccaaag gcagcgtctc
    13741 acggcaaata caagcgttag aacatcaact gggcatccgc ctgctccacc gcaccacccg
    13801 gcgggtacag cttactcagg acgggatggt ttactacgaa cgggcaaaag atctgttgag
    13861 taacctggat gaactggagg gtcttttcca gcctgatccc gccagtatca gcggcaaaat
    13921 acgggtagat atcccgccag gtctcgcaaa cagccttatc atgccgcgcc tgctcacttt
    13981 tttgcatcag tatcccggca ttgcgctgga actttgtagt agcgatcgac aggtcgattt
    14041 actacgggaa gatttcgact gtgtggtgcg cacagagccg ctacatgcgc cagggatact
    14101 gacgcgcccg cttggcaaac taagaagggt gaactgcgcc agcccacaat acctggcgcg
    14161 ctttggatat ccagaaaacc ttgacgacct cgcctcacat gcgatggtgc attattcatt
    14221 gaccccggga gtctcttcac cgggttttgc cttcgaaact ccccacggta tgcagtgggt
    14281 aaaaaccggc ggaatgctaa cggtaaacag tacggagacc tggcatacgg cctgtctggc
    14341 aggattaggg atcattcaga cgccgcgcat tgctgtacgg gaggcgttac gcgccggagc
    14401 gctcattgaa attttaccgc aatatcgcgc cgctccactg ccggtgacgc tgcattatcc
    14461 ccatcgccgt aatctttccc gccgggtaca cctgtttatg gtatggctga ctgaaaccat
    14521 taaagaggcc gcagagtagc cgcattttca gcatccaccg gggagaagct atactgacat
    14581 attctattaa tgatgaagga ctaccgacct gatgacgcag gaaaatgacg taaaacgccc
    14641 tattcaggaa ctggagcacg acccgataca aaaaatagaa acgcagccgc atgacgcccc
    14701 ggaaaaaaac gaaaaggcaa atcaggcgtt gcattccgtc accaccctga tgcaaaaaat
    14761 acagcgtcaa ccgatggtgg cccacctcat tcgcgcgacc gaacgtttta acgatcgact
    14821 gggtaatcag tttggcgcgg ctatcaccta cttttcgttt ctgtcgatga tcccgataat
    14881 gatggtgtcc tttgccgcgg caggttttat cctcgcctcg caccctaatc tactggaaga
    14941 tattttcagc aagatattga tgaatgtgag cgatcctacg ctggcgtcca cgcttaaaaa
    15001 tacgattaat acggcggttc aacagcgtac cacggtaggg ctggtcggac tgggtatcgc
    15061 gctctattcc ggcgttaact ggatgggcaa cctgcgggaa gcgattcgcg cccagtcacg
    15121 ggacgtctgg gagcgcaagc cgcaggatca ggagaaaatc tggctcaaat atctgcgcga
    15181 ttttatctcg ctgattggat tattaatcgc tttaatcatt acgctgtcca ttacttccat
    15241 cgccggttcc gcccagcaga tgatcatctc cgccttgtat ctcgacagca tcgaatggtt
    15301 aaaaccggcc tggcatttga tcggtctggc catctctatt tttgccaact atctgctttt
    15361 cttctggatt ttctggcgac tgcctcgcca tcgtccccgt aaaaaagcgt tgattcgcgg
    15421 gacatttatc gccgctatcg gttttgaggt gattaaaatc attatgactt atacgctgcc
    15481 gtcactggtg aaatcgcctt ccggcgcggc gtttggctcc gtactcggtc tgatggcatt
    15541 cttctacttt tttgcccgcc tgacgttatt ctgcgcggcc tggatagcca ccgccgaata
    15601 taaggacgac ccgcgaatgc cgggtaaaac gcaacgctag tctgcggctt gctgccgaat
    15661 ggcacgcacg gcgtcgtcat tcggcctact gctgtatgga cccaggccag gtatgtaaag
    15721 cgtacccggc ggtacaatca ggcacgtcct tccgcctcat ctcattgttt cagcatatca
    15781 atccggtaat taacttttat ttaaccagaa accagtttta tccaccaatc ctaaaattat
    15841 gtgaagcatt tcatagacgc aaaatagctg gcttaaacat tatccccttt ttgcgctttt
    15901 tttgaccatt tttggctttt gttacacatt gaaatataac ttttgctgtg cgtaatatgg
    15961 ctattcgttc gctaaaaata agaaaatagt atgcaagcaa ccgccacaac actcgaccat
    16021 gagcaggaac atgttccggt aaactcacgc aataaagtcg ttattgcctc gcttatcggc
    16081 accgcgattg agttcttcga cttctatatt tacgccaccg cagcggtgat cgtgttcccc
    16141 cttatcttct tcccccaggg cgatcccact gcggcaacgc tacaatcgct cgccaccttc
    16201 gctatcgcgt ttgtggcgcg tccgatcggc tctgcgctat ttggtcactt cggcgaccgg
    16261 gtaggccgca aagtcacgct ggtggcttcg ctgctgacga tggggatctc cacggtcatt
    16321 atcggtctgt taccgggcta cgcgacgata ggtattttcg cgccgctgct
//
LOCUS       DAGWFR010000082        16269 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.083, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000082 DAGWFR010000000
VERSION     DAGWFR010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 16269)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16269)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16269
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.083"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..1142
                     /gene="menE"
                     /locus_tag="MOX77_002723"
     CDS             <1..1142
                     /gene="menE"
                     /locus_tag="MOX77_002723"
                     /EC_number="6.2.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="o-succinylbenzoate--CoA ligase"
                     /protein_id="HCA3358205.1"
                     /translation="ARVLPVNPQLPQTLLEALVPKLTLRFALTLEGENAFSGLTVLQL
                     RKSTVAYAVAWQPQRLVSMTLTSGSTGLPKAAVHTCQAHLASAQGVLSLMPFGPQDDW
                     LLSLPLFHVSGQGIMWRWLFAGARMTVRDKQPLEQMLAGCTHASLVPTQLWRLLANRA
                     AVTLKAVLLGGAVIPVELTDQASKQGIRCWCGYGLTEFASTVCAKEADGSDDVGAPLP
                     GREIRIVDNEVWLRAASMAEGYWRDGKLIPLVNDEGWFATRDRGELNHGRLTIAGRLD
                     NLFFSGGEGIQPEEVERVINAHPLVQQAFVVPVEDKEFGHRPVAVVEYASQAGDVNLA
                     EWVRDKLARFQQPVRWLTLPSELKNGGIKISRRALQQWVCKICKN"
     gene            1240..1497
                     /gene="pmrD"
                     /locus_tag="MOX77_002724"
     CDS             1240..1497
                     /gene="pmrD"
                     /locus_tag="MOX77_002724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000455131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal transduction protein PmrD"
                     /protein_id="HCA3358206.1"
                     /translation="MEWLVKKSHYVKKRACHVLVLCDSGGSLKMIAEANSMILLSPGD
                     ILSPLQDAQYCINREKHQTLKIVDARCYSCDEWQRLTRKPL"
     gene            complement(1492..1869)
                     /gene="arnF"
                     /locus_tag="MOX77_002725"
     CDS             complement(1492..1869)
                     /gene="arnF"
                     /locus_tag="MOX77_002725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-amino-4-deoxy-L-arabinose-phosphoundecaprenol
                     flippase subunit ArnF"
                     /protein_id="HCA3358207.1"
                     /translation="MGVMWGLISVAIASLAQLSLGFAMMRLPSIAHPLAFISGLGAFN
                     AATLALFAGLAGYLVSVFCWQKTLHMLALSKAYALLSLSYVLVWVASMLLPGLQGAFS
                     LKAMLGVLCIMAGVMLIFLPARS"
     gene            complement(1869..2204)
                     /gene="arnE"
                     /locus_tag="MOX77_002726"
     CDS             complement(1869..2204)
                     /gene="arnE"
                     /locus_tag="MOX77_002726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-amino-4-deoxy-L-arabinose-phosphoundecaprenol
                     flippase subunit ArnE"
                     /protein_id="HCA3358208.1"
                     /translation="MIGIVLVLASLLSVGGQLCQKQATRPLTTGGRRRHLMLWLGLAL
                     ICMGAAMVLWLLVLQTLPVGIAYPMLSLNFVWVTLAAWKIWHEQVLPRHWLGVALIIS
                     GIIILGSAA"
     gene            complement(2201..3847)
                     /gene="arnT"
                     /locus_tag="MOX77_002727"
     CDS             complement(2201..3847)
                     /gene="arnT"
                     /locus_tag="MOX77_002727"
                     /EC_number="2.4.2.43"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid IV(A)
                     4-amino-4-deoxy-L-arabinosyltransferase"
                     /protein_id="HCA3358209.1"
                     /translation="MMKSIRYYLAFAAFIALYYVIPVNSRLLWQPDETRYAEISREML
                     ASGDWIVPHFLGLRYFEKPIAGYWINSLGQWLFGATNFGVRAGAILTTLLAAALVAWL
                     TFRLWRDKRTALLASVIFLSLFAVYSIGTYAVLDPMIALWLTAGMCCFWQGMQATTRT
                     GKIGMFLLLGATCGLGVLTKGFLALAVPVVSVLPWVIVQKRWKDFLLYGWLAVLSCFV
                     VVLPWAIAIARREADFWHYFFWVEHIQRFAMSDAQHKAPFWYYLPVLLAGSLPWLGLL
                     PGALKLGWRERNGAFYLLGWTIMPLLFFSIAKGKLPTYVLSCFAPIAILMARFVLHNV
                     KEGVAALRVNGGINLVFGIIGIVAAFVVSSWGPLKSPVWTHIETYKVFCVWGVFTVWA
                     FVGWYSLCHSPKYLLPAFCPLGLALLFGFSVPDRVMESKQPQFFVEMTQAPLASSRYI
                     LADSVGVAAGLAWSLKRDDIMLYGHAGELRYGLSYPDVQNKFVKADDFNAWLNQHRQE
                     GIITLVLSIDKDEDISALSLPPADNVDYQGRLVLIQYRPK"
     gene            complement(3844..4743)
                     /locus_tag="MOX77_002728"
     CDS             complement(3844..4743)
                     /locus_tag="MOX77_002728"
                     /EC_number="3.5.1.n3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-deoxy-4-formamido-L-arabinose-
                     phosphoundecaprenol deformylase"
                     /protein_id="HCA3358210.1"
                     /translation="MTKVGLRIDVDTLRGTREGVPRLLATLHRHGVQASFFFSVGPDN
                     MGRHLWRLIKPRFLWKMLRSNAASLYGWDILLAGTAWPGKNIGNANAGIIRETATYHE
                     TGLHAWDHHAWQTHSGHWSIRQLEEDIARGITALEAIIGKPVTCSAAAGWRADGRVVR
                     AKEPFNLRYNSDCRGTTLFRPLLMPGQTGTPQIPVTLPTWDEVIGPAVQAQSFNTWII
                     SRMLQDKGTPVYTIHAEVEGIVHQPLFEDLLVRARDAGITFCPLGELLPASPESLPLG
                     QIVRGHIPGREGWLGCQQAVSAS"
     gene            complement(4740..6722)
                     /gene="arnA"
                     /locus_tag="MOX77_002729"
     CDS             complement(4740..6722)
                     /gene="arnA"
                     /locus_tag="MOX77_002729"
                     /EC_number="1.1.1.305"
                     /EC_number="2.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-4-amino-4-deoxy-L-arabinose
                     formyltransferase/UDP-glucuronic acid oxidase ArnA"
                     /protein_id="HCA3358211.1"
                     /translation="MKAVIFAYHDMGCQGVQAVLDAGYEIAAIFTHADNPAENTFFGS
                     VSRLAAGLGIPVYAPDNVNHPIWVDRIAELAPDIIFSFYYRNLLSEEILHLAPAGAFN
                     LHGSLLPAYRGRAPLNWVLVNGESETGVTLHRMVKRADAGEIVASQRVAIAQDDVALT
                     LHHKLCQAARQLLNSILPTMKCGNIPSVPQRESDATYYGRRRPEDGLIDWHKPVSTVH
                     NLVRAVAAPWPGAFSYNGSQKFTIWSSRICPDAQGALPGSVISVSPLRVACADGALEI
                     ITGQAGDGITVQGSQLAQTLGLVAGACLNRPPATSGKRRIRVLILGVNGFIGNHLTER
                     LLDEENYEVYGMDIGSNAISRFLLHPRFHFVEGDISIHSEWIEYHVKKCDVVLPLVAI
                     ATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRVVFPSTSEVYGMCTDASFDEDKSN
                     LIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDSLNAARIGS
                     SRAITQLILNLVEGTPIKLIDGGQQKRCFTDIRDGIEALFRIIVNEGDRCDGKIINIG
                     NPDNEASIQELATLLLDSFDKHPLRCHFPPFAGFQVVESRSYYGKGYQDVAHRKPSID
                     NARRCLDWEPSIAMRDTVEETLDFFLRSVDIAERAS"
     gene            complement(6719..7702)
                     /gene="arnC"
                     /locus_tag="MOX77_002730"
     CDS             complement(6719..7702)
                     /gene="arnC"
                     /locus_tag="MOX77_002730"
                     /EC_number="2.4.2.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-phosphate
                     4-deoxy-4-formamido-L-arabinose transferase"
                     /protein_id="HCA3358212.1"
                     /translation="MFDAAPIKKVSVVIPVYNEQESLPELIRRTTTACESLGKAWEIL
                     LIDDGSSDSSAELMVKASQEADSHIISILLNRNYGQHAAIMAGFSHVSGDLIITLDAD
                     LQNPPEEIPRLVAKADEGFDVVGTVRQNRQDSLFRKSASKIINLLIQRTTGKAMGDYG
                     CMLRAYRRPIIDTMLRCHERSTFIPILANIFARRATEIPVHHAEREFGDSKYSFMRLI
                     NLMYDLVTCLTTTPLRLLSLLGSVIAIGGFSLSVLLIVLRLALGPQWAAEGVFMLFAV
                     LFTFIGAQFIGMGLLGEYIGRIYNDVRARPRYFVQQVIYPESTSFTEESHQ"
     gene            complement(7705..8844)
                     /gene="arnB"
                     /locus_tag="MOX77_002731"
     CDS             complement(7705..8844)
                     /gene="arnB"
                     /locus_tag="MOX77_002731"
                     /EC_number="2.6.1.87"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_024188371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-4-amino-4-deoxy-L-arabinose
                     aminotransferase"
                     /protein_id="HCA3358213.1"
                     /translation="MSDFLPFSRPAMGAEELAAVKTVLDSGWITTGPKNQELEAAFCR
                     LTGNQYAVAVSSATAGMHIALMALGIGEGDEVITPSMTWVSTLNMIVLLGATPVMVDV
                     DRDTLMVTPEHIEAAITPQTKAIIPVHYAGAPADLDAIYALGARYGIPVIEDAAHATG
                     TSYKGRHIGARGTAIFSFHAIKNITCAEGGIVVTDNPQFADKLRSLKFHGLGVDAWDR
                     QSGGRAPQAEVLAPGYKYNLPDFNAAIALAQLQKLDALNARRAAIAAQYHQAMADLPF
                     QPLSLPPWEHIHAWHLFIIRVDEARCGITRDALMASLKTKGIGTGLHFRAAHTQKYYR
                     ERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVITALHQIAGQ"
     gene            9137..9742
                     /gene="pmrG"
                     /locus_tag="MOX77_002732"
     CDS             9137..9742
                     /gene="pmrG"
                     /locus_tag="MOX77_002732"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide core heptose(II)-phosphate
                     phosphatase"
                     /protein_id="HCA3358214.1"
                     /translation="MLAFTLRFIKNKRYFAILAGALVIIAGLASQHAWSGNGLPQING
                     KALAALAKQHPVVVLFRHAERCDRSDNTCLSDSTGITVNGAQDARALGKAFSADIQNY
                     NLYSSNTVRTIQSATWFSAGRSLTADKKMMDCGSGIYASINTLLKKSQNKNIVIFTHN
                     HCLTYIAKNKRGVKFDPDYLNALVMYAENGKLFLDGEFVPG"
     gene            complement(9787..10212)
                     /gene="nudI"
                     /locus_tag="MOX77_002733"
     CDS             complement(9787..10212)
                     /gene="nudI"
                     /locus_tag="MOX77_002733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphatase NudI"
                     /protein_id="HCA3358215.1"
                     /translation="MRQRTIVCPLIQNDGCYLLCKMADNRGVFPGQWALSGGGVEPGE
                     RIEEALRREIREELGEQLILSDITPWTFRDDIRVKTYADGRQEEIYMIYLIFDCVSAN
                     RDICINDEFQDYAWVKPEELALYDLNVATRHTLALKGLL"
     gene            10491..11033
                     /locus_tag="MOX77_002734"
     CDS             10491..11033
                     /locus_tag="MOX77_002734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311165.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358216.1"
                     /translation="MKKSILLGFAGMLFVSASAQAISISGQAGEDYTNIGVGFGTEST
                     GLALSGNWMHNDDDGDAAGVGLGLNIPVGPLLATVGGKGIYTNPKDSDEGYAAAVGGG
                     LQWKIGNSFRLFGEYYYSPDSLSSGIESYEEANAGARFTIMRPLSIEAGYRYLNLAGK
                     DGNRDNAIADGPYVGVNASF"
     gene            11148..12344
                     /locus_tag="MOX77_002735"
     CDS             11148..12344
                     /locus_tag="MOX77_002735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamide mononucleotide deamidase-related
                     protein YfaY"
                     /protein_id="HCA3358217.1"
                     /translation="MLNVEMLSTGDEVLHGQIVDTNAAWLADFFFHQGVPLSRRNTVG
                     DNLDSLVAILRERSQHADVLIVNGGLGPTSDDLSALAAATAKGEGLVLHQAWLTEMER
                     YFQQRGRVMAPSNRKQAELPASAEFINNPVGTACGFALQLNRCLMFFTPGVPSEFKVM
                     VEKEILPRLRARFSLPEPPLCLRLTTFGRSESDLAQRLDSLPLPPGVTMGYRSSMPII
                     ELKLTGPATQREAMLALWPEVKRVAGQNLIFEGTENLPAQIARRLQERQLSLTLSEQY
                     TSGLLALQLSRAGAPVLASEVVPSQEETLAQTAHWTTERRSNHYAGLALAVSGLENEH
                     LNFALATPDGTYALRVRFSANRYSLAIRQEVCAMMALNMLRRWLNGEDITSEHGWIDV
                     VESLTS"
     gene            12594..13376
                     /locus_tag="MOX77_002736"
     CDS             12594..13376
                     /locus_tag="MOX77_002736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HCA3358218.1"
                     /translation="MLESSKVPALTRAIDILNLIARIGPCSAAIIIETLRIPKSTAYL
                     LLNELKRQRFISLDHQENYCLWTKLVELSGHALSKMDLRELARPRLTQLMDEIGLLCH
                     LGIIDHENAYYILKVESSSTISVRSHEGKSLSLYRSGIGKCLLAWQPAAVRKAIIEKM
                     VWERATLTTITEPQQLNDELERIRQRGWSFDNGEDYPDVRCVAAPVFNARNELTAAIS
                     LVGTRLQINEENLDYLAGKAIACAKDISRLLGWKSPFDSLAS"
     gene            13390..14595
                     /gene="rhmD"
                     /locus_tag="MOX77_002737"
     CDS             13390..14595
                     /gene="rhmD"
                     /locus_tag="MOX77_002737"
                     /EC_number="4.2.1.90"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416750.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-rhamnonate dehydratase"
                     /protein_id="HCA3358219.1"
                     /translation="MTLPKIKHVRAWFIGGATAEKGAGGGDYHDQGGNHWIDDHIATP
                     MSKYRDYEQSRQSFGINVLGTLIVEVEAENGQTGFAVSTAGEMGCFIVEKHLNRFIEG
                     KCVSDIKLIHDQMLGATMYYSGSGGLVMNTISCVDLALWDLFGKVVGLPVYKLLGGAV
                     RDEIQFYATGARPDLAKEMGFIGGKMPTHWGPHDGDAGIRKDAAMVADMREKCGPDFW
                     LMLDCWMSQDVNYATKLAHACAPFNLKWIEECLPPQQYEGYRELKRNAPAGMMVTSGE
                     HHGTLQSFRTLAETGIDIMQPDVGWCGGLTTLVEIAALAKSRGQLVVPHGSSVYSHHA
                     VITFTNTPFSEFLMTSPDCSTLRPQFDPILLDEPVPVNGRIHKSVLDKPGFGVELNRD
                     CHLKRPYSH"
     gene            14651..15940
                     /locus_tag="MOX77_002738"
     CDS             14651..15940
                     /locus_tag="MOX77_002738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3358220.1"
                     /translation="MSITLLDGVVKKNRARLIPFMLALYVLAFLDRSNIGFAKETYQI
                     DTGLSNEAYALGAGIFFVVYAFLGVPANLLMRKFGARTWIGTTTLLWGFLSAAMAWAD
                     SEAKFLIIRTLLGAAEAGFFPGMIYLTSQWFPQRNRASIMGLFYMGAPLALTLGSPLS
                     GALLEMHGFMGHPGWFWMFVIEGLLAIGAGIFTFFWLDDTPQQARFLSLEEKNALIRQ
                     LASEEEKKVTSRLADALRNGRVWQLAIIYLTIQVAVYGLIFFLPTQVAALLGTKVGFT
                     ASVVTAVPWVAALLGTWLIPRYSDRTGDRRNVAAVTLLAAGIGIGLSGLVSPVLAILA
                     LCVAAVGFIAVQPVFWTMPTQLLSGTALAAGIGFVNLFGAVGGFIAPILRVKAETLFA
                     SDAAGLLTLAGVAIIGSLIIFTLSVNRPVAQSGAAHH"
     gene            15966..>16269
                     /locus_tag="MOX77_002739"
     CDS             15966..>16269
                     /locus_tag="MOX77_002739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461231.1"
                     /note="catalyzes the retro-aldol cleavage of
                     2-keto-3-deoxy-L-rhamnonate to pyruvate and lactaldehyde;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-keto-3-deoxy-L-rhamnonate aldolase"
                     /protein_id="HCA3358221.1"
                     /translation="MNALLSNPFKEGLRKRDTQIGLWLSSTTSYMAEIAATSGYDWLL
                     IDGEHAPNTVQDLYHQLQAIAPYASQPVIRPIEGSKALIKQVLDIGAQTLLIPMVDT"
BASE COUNT         3813 a         4207 c         4480 g         3769 t
ORIGIN      
        1 gcgcgcgggt tctgcccgtc aacccgcagt tgccccagac gttgctggag gcgctggtgc
       61 cgaagttaac gctgcgtttt gcgctgacac tggaaggcga aaacgcgttt tccggattaa
      121 ccgtgttgca gttgcggaaa agtacagtgg cgtatgctgt ggcctggcaa ccgcagcgtc
      181 tggtttccat gacgctgaca tcgggttcca caggattgcc aaaagcggct gtacatacgt
      241 gccaggcgca tcttgccagc gcgcaggggg tgctttcgct aatgccgttt ggccctcagg
      301 atgactggct gctatcgctg ccgctgtttc atgtatccgg gcagggtatt atgtggcgtt
      361 ggctcttcgc cggggcgcgc atgacggtac gcgataagca accgctggag cagatgctgg
      421 caggttgtac tcatgcttcg ttggtgccga cgcagctgtg gcggctgttg gcgaatcggg
      481 cggcggtgac gctgaaagcc gttttgctcg gcggcgcggt gattccggtt gaactcaccg
      541 accaggccag caaacaaggg attcgctgct ggtgcgggta tgggctcacg gagttcgcgt
      601 ctacggtatg cgccaaagag gccgatggtt cggatgatgt gggcgcgccg cttcccggca
      661 gagagatcag aatcgtcgat aatgaagtct ggctgcgcgc cgccagtatg gcggaaggtt
      721 actggcgtga tggcaaactg atcccgctgg ttaatgacga aggctggttt gccacgcgcg
      781 atcgcggcga gctgaaccac ggcaggctaa ccatcgccgg gcggctggac aacttgttct
      841 ttagcggcgg cgaaggcatt cagccggagg aagtcgaacg cgttattaac gcgcatccgc
      901 tggtgcaaca agcctttgtc gtgccggtag aagataaaga gtttggccat cgtcccgttg
      961 cggttgtgga gtatgcatcg caggccggag acgtgaacct cgctgaatgg gttcgcgata
     1021 agctggcgcg ttttcaacag ccggttcgct ggttgacgct gccgtcagaa ctgaaaaacg
     1081 gagggattaa aatatctcgc cgtgcgctcc agcagtgggt gtgtaagatc tgtaaaaatt
     1141 aatgttaggt taatatacaa ccattccatc gctattgccg ttttgtttat ccgttgatgt
     1201 gtaacgtgtt atgaacaatc agcgtgaaac gggggcgcta tggaatggtt ggttaagaaa
     1261 tcgcattatg tcaaaaagag ggcgtgccat gttctggtgc tgtgcgatag cggcggttcg
     1321 ctaaaaatga tcgccgaggc gaattccatg atattactga gtcccggcga tatcctgtcg
     1381 cctttacagg atgcgcagta ttgtattaat cgggaaaaac accagacctt aaaaatcgtt
     1441 gatgcacgct gttattcctg cgacgaatgg cagcggttga cgcgcaagcc attatgatct
     1501 ggcgggcaga aaaatcagca ttacccccgc cataatgcac aatacgccga gcatcgcttt
     1561 taggctgaaa gcgccttgca aaccgggtaa caacattgag gctacccaga caagcacata
     1621 actgagactc agcagcgcat aggctttgct gagcgcgagc atgtgtaatg ttttctgcca
     1681 gcagaagacg gaaaccagat atcccgccaa accggcgaat agcgccaggg tcgcggcatt
     1741 aaatgcgccc agcccggaaa taaacgccag tggatgcgct atcgatggca gtcgcatcat
     1801 ggcgaatcct aaactcaact gggcgaggga ggcaatcgca acgcttatca gtccccacat
     1861 tacgcccatt atgccgcact ccccagaatg ataatgccgc tgataattaa tgcgacgccc
     1921 aaccagtggc ggggcagaac ctgttcatgc cagattttcc aggccgccag cgtgacccag
     1981 acaaaattca gactcaacat cgggtaagca attcccaccg gcagggtttg tagcaccagc
     2041 agccacagca ccatcgctgc acccatgcat atcagcgcca ggcccagcca cagcatcaag
     2101 tgacggcggc gtccgcccgt cgtcaatggc cgtgtcgctt gcttctggca gagctgaccg
     2161 ccaacgctga gcagactggc aagcaccaga acgatgccga tcatttaggc cgatactgaa
     2221 ttaacaccag acgcccctga taatcaacat tgtccgcagg gggaagggaa agtgcgctga
     2281 tgtcttcgtc tttgtctatt gaaagtacta gcgtaataat gccctcctga cgatgttggt
     2341 tgagccaggc gttaaaatcg tcggctttaa cgaatttatt ctgtacatca ggatagctaa
     2401 gaccatacct gagttcgccc gcgtgtccgt agagcataat atcgtctcgt ttcagactcc
     2461 aggccagccc ggcggcgacg cccacgctgt cggcaagaat atagcggctt gatgccaaag
     2521 gcgcctgggt catttcgaca aaaaactgtg gctgtttgga ctccatcacc ctgtcgggga
     2581 cggaaaagcc gaacagcagc gccagtccca gcggacaaaa cgcgggtaat aggtattttg
     2641 ggctatgaca gaggctatac cagcccacaa acgcccaaac agtaaagacg ccccagacgc
     2701 aaaacacttt ataggtttcg atatgcgtcc acaccggcga tttcagcggg ccccatgagg
     2761 agacgacaaa cgccgcgacg atcccgatta tcccgaacac caggttgatc ccgccgttga
     2821 cacgtagcgc ggcgacgcct tcttttacgt tatgcaggac gaagcgcgcc atgagtatcg
     2881 ctatcggtgc gaaacaggaa agaacatagg tgggcagttt ccctttcgca atgctgaaaa
     2941 agagaagcgg catgatcgtc catccgagca aatagaatgc gccgtttcgc tcgcgccagc
     3001 ccagtttaag cgcgccaggc agtaacccca gccacggtaa acttcccgcg agcagcaccg
     3061 gcagatagta ccagaaaggg gctttatgct gggcatcgct catggcgaat cgctggatat
     3121 gctccaccca gaaaaagtaa tgccagaaat cggcttcgcg tcgcgcaatg gcgatcgccc
     3181 agggaaggac aaccacaaag cagctcaaga ccgccagcca gccgtaaagc aaaaagtcct
     3241 tccagcgttt ctgaacaata acccacggca gcacgctcac caccggtacg gccagggcga
     3301 ggaacccttt agttaataca cccagaccgc aggttgcgcc cagtagcaaa aacatcccaa
     3361 tcttgcccgt tcgggtcgtg gcctgcatcc cctgccagaa acaacacatc ccggccgtaa
     3421 gccaaagcgc gatcatcggg tcgagtaccg catacgtccc gatactgtaa acggcaaaga
     3481 gggagagaaa gatcacggag gcgagcaacg cggtacgttt atcccgccat aagcggaacg
     3541 tcagccacgc caccagcgct gcggccagca atgtcgttaa aatagcgccg gcccgcacgc
     3601 caaaattggt agcgccaaaa agccactgac ccagactgtt tatccagtaa ccggctatcg
     3661 gtttttcaaa ataacgtaat cccagaaaat gcggcacgat ccagtcgcca gacgccagca
     3721 tctcccgact tatttcggca tagcgcgttt catccggctg ccagagcagg cggctgttga
     3781 caggaataac atagtagagc gcgataaacg cggcgaaagc cagataatag cgtatcgatt
     3841 tcatcatgag gcgctcactg cctgttgaca ccccagccaa ccttcacggc cagggatgtg
     3901 tccacgtaca atttgcccca acggcagaga ctcaggcgat gccggcagca gttcgcccag
     3961 aggacaaaag gtgatccccg catcgcgtgc acgaacgagc aaatcttcaa acagcggctg
     4021 atggacaata ccttcgactt ccgcatggat ggtatatacc ggcgtgcctt tgtcctgcaa
     4081 catacgggaa ataatccagg tattgaacga ctgcgcctga acggcggggc cgataacctc
     4141 atcccacgtg ggtaaggtga ccgggatttg cggcgtccct gtctggcccg gcatcagtag
     4201 cggacggaat aaggtggttc cacggcaatc gctgttatac ctcaggttga acggttcttt
     4261 cgcacgaaca acgcgcccat ccgctcgcca gccggccgcg gctgagcagg tgacgggttt
     4321 tccgataatg gcctcaagcg ccgttatgcc gcgcgcaata tcttcttcaa gctggcggat
     4381 actccagtgg ccgctgtgag tctgccacgc atggtgatcc caggcatgta gtcccgtctc
     4441 atggtatgtt gccgtttcac gaataatccc ggcattagcg ttgccgatat tttttcccgg
     4501 ccaggcggtg ccggccagca ggatatccca accgtagagc gaggcggcgt ttgaacgtag
     4561 cattttccat aaaaatcgcg gttttatcag acgccaaaga tggcgtccca tattgtccgg
     4621 cccgacgctg aagaaaaagc tggcctgaac gccgtggcga tgcaatgtcg ccagcagccg
     4681 gggaacacct tcacgcgttc ctcgcaaggt atcaacgtca atgcgtaaac cgactttcgt
     4741 catgatgcgc gttccgcgat atcgacgcta cgcagaaaga agtccagcgt ttcttcaacc
     4801 gtatcacgca tcgcaataga cggctcccag tccagacagc gcctggcatt gtcgatactg
     4861 ggtttccggt gtgcgacatc ctgataaccc ttgccgtaat aactacggct ttcgacgacc
     4921 tggaaaccgg caaatggtgg gaaatggcag cgcagcggat gcttatcaaa actgtcgagc
     4981 aacagcgtcg ccagttcctg aatactggct tcgttgtcag ggttgccgat attaatgatt
     5041 ttgccatcgc accgatcgcc ctcattcaca ataatgcgga ataatgcttc gatcccgtca
     5101 cgaatatcgg tgaaacagcg cttctgctga ccgccgtcga taagcttgat cggcgtccct
     5161 tctaccaggt tcagaatcaa ctgcgttatc gcgcgtgaac tgccgatacg cgccgcgttc
     5221 aggctatcca gccgcggccc catccagtta aagggacgga aaagcgtgaa gcgcaatccc
     5281 tctttttcgc cataagccca aatcacccgg tcgagaagct gtttggaaac ggagtaaatc
     5341 cagcgcggct tattcaccgg cccgacgatc agattcgatt tgtcttcgtc aaaagaggcg
     5401 tccgtacaca tgccgtacac ttcagaggta gacgggaaaa ccacgcgttt acggtatttc
     5461 acgcaataac ggataatccg caggttttct tcaaaatcaa gttcaaagac gcgcagcggg
     5521 ttgcgggtgt attcaatcgg ggttgcaatt gctaccagcg gcagtacgac atcgcatttt
     5581 ttgacatgat attcgatcca ttctgagtgg atgctgatat ctccctccac gaaatgaaag
     5641 cgagggtgga gcaggaatcg gctaatggcg ttgctgccga tatccatacc gtagacctcg
     5701 taattctctt catccagtaa ccgttcggtc aaatgattgc cgataaaacc gttgacgccg
     5761 aggatgagaa cgcgaatgcg acgtttaccg ctggtcgctg gtggacggtt caaacacgcg
     5821 cccgccacca gaccaagcgt ctgtgcaagc tgcgagccct gtacagtaat gccgtctccg
     5881 gcctggccgg taataatctc cagcgcgcca tcggcgcagg cgacccgcag cggagagacc
     5941 gaaattaccg agccgggaag cgcgccttgc gcatccggac aaattcggga agaccagata
     6001 gtgaattttt gcgagccgtt atagctgaac gcgccgggcc agggggcggc taccgcccgc
     6061 accaggttat gcaccgtgga aaccggtttg tgccagtcga taaggccatc ttccggcctg
     6121 cggcgaccat aatacgtagc gtcagactca cgctgaggaa cagaaggtat attgccgcat
     6181 ttcatggtgg gcaggatgct attaagtaac tggcgcgcgg cctgacatag cttatgatgc
     6241 agggtaagcg caacatcgtc ctgcgcaata gcgacgcgtt gactggcgac aatctctccg
     6301 gcgtcggcac gtttgaccat acgatgcagc gttacgcccg tttcgctttc gccgttaacc
     6361 agaacccagt ttagcggcgc acggccacga taggctggca atagagaacc gtgcagattg
     6421 aacgcgccag ccggggcgag gtgcagaatt tcttcgctta acaggttgcg gtaatagaac
     6481 gaaaaaataa tatctggcgc aagttcagcg atgcggtcga cccagatagg atggtttacg
     6541 ttatccggcg cataaaccgg aatccctaat cctgccgcca gccgggagac ggagccaaaa
     6601 aaggtgtttt ccgcaggatt gtcggcatga gtgaaaattg cggcaatctc atatcctgca
     6661 tccagtacgg cctgcacgcc ctgacatccc atatcgtgat aggcaaaaat aacggctttc
     6721 attggtgact ttcctcagta aacgacgtgc tttccgggta gataacttgt tgaacaaaat
     6781 agcgggggcg ggcgcggaca tcgttataaa tgcgaccgat gtattcgccc agcagtccca
     6841 taccgatgaa ttgcgcgccg atgaaggtaa acagaacggc aaagagcata aatacgcctt
     6901 ccgccgccca ctgcggtccc agtgccaggc gaagtacaat aagcaatacc gacaggctaa
     6961 acccgccgat ggcgataaca ctgcccagca gactcaacag gcgcagaggc gtcgtcgtca
     7021 ggcaggtcac caggtcatac atcaggttaa tgagacgcat aaaactgtat ttagagtcgc
     7081 caaattcacg ttcagcgtga tgcaccggga tttcggtagc ccgacgagcg aaaatgttgg
     7141 ccagaatagg gataaaggtg ctgcgttcat ggcagcgcaa catggtatcg ataatagggc
     7201 ggcgataggc gcgtaacatg cagccgtaat cgcccatcgc tttgcccgtt gtgcgctgga
     7261 tcagcagatt aatgattttt gacgccgatt tgcgaaacag gctgtcctgt cggttctgtc
     7321 gcacggtgcc taccacatcg aacccttcat cggctttcgc caccaggcgc gggatctctt
     7381 ccggcgggtt ttgcagatcg gcatccagcg taatgatgag atcgccgctt acatggctaa
     7441 accccgccat aatcgctgca tgttgaccgt agttacggtt gagtaaaata gagatgatat
     7501 ggctatcggc ctcctgggac gccttaacca tcagctccgc cgagctatcg ctgctaccat
     7561 catctatcaa taaaatctcc cacgctttgc ccagactctc gcaggcggtg gtggtgcgtc
     7621 ttatcaattc cggcaggctt tcctgttcgt tatagacagg aataaccacc gagacttttt
     7681 ttatgggggc ggcgtcaaac atgcttattg tcctgctatc tgatgaaggg cggtaatgac
     7741 ccgatcaaag tcactctcgg tcatgtccgg gaagagcggc agtgagcaga tccgctcgct
     7801 gttccactcg gtgtcaggca gcgtgagcgt tgggaaacgt tcgcgataat atttttgcgt
     7861 atgcgcggcg cggaaatgca gccctgtgcc gatgcctttc gttttcagcg atgccatcag
     7921 agcatcccgg gtaataccgc agcgggcttc atcgacccgg ataatgaata aatgccaggc
     7981 gtgaatatgc tcccacggcg gaaggctcag aggctgaaaa ggaaggtctg ccattgcctg
     8041 atggtactgc gctgcgatgg cggcgcggcg agcgttaagc gcatccagtt tctgtaactg
     8101 ggcaagcgcg atagcggcgt tgaagtcggg caaattatat ttgtagcccg gcgccaggac
     8161 ttccgcttgt ggcgcgcgtc ctccgctctg tcgatcccag gcatcaacgc caagcccgtg
     8221 aaacttgaga ctgcgcagtt tatcggcgaa ttgcgggtta tccgtgacga cgataccgcc
     8281 ttcagcgcag gtaatgttct taatggcgtg gaaggagaaa atcgcggtgc cccgggcgcc
     8341 aatgtggcga cctttgtagc tggttcctgt cgcgtgcgcc gcgtcttcaa tcaccggaat
     8401 gccataacgc gcgccaagag cgtaaatagc gtccagatcg gcgggcgcgc cagcgtagtg
     8461 gacggggata attgctttgg tttgtggcgt aatcgcggct tcgatatgtt caggcgtgac
     8521 catcagcgta tcgcgatcga catcgaccat gacgggggtc gcgccgagta aaacgatcat
     8581 atttagcgta gaaacccacg tcattgacgg tgtaatgacc tcgtcgcctt caccaatacc
     8641 cagcgccatc aacgcgatgt gcataccggc agtggctgaa ctgacggcaa cggcatattg
     8701 attgcctgtt agccgacaaa acgccgcttc cagttcctga tttttcgggc cggttgttat
     8761 ccaacctgag tccagtacgg tcttaacggc agcgagctct tccgcgccca tcgccggacg
     8821 ggagaaaggc aaaaagtccg acatcatttt tccttcagcc attgaaagcc gcttttcaaa
     8881 tatttcggca atagaaaagg gcttattttt taacgcattt agctgaaccc tactggatga
     8941 agattaaatt aacattaaga aattaaggtg aagtaaaaag ataattttaa cggaattatg
     9001 ctttgctttc gccgaaagtt taaggcattt tatgcatgcc caaaagctgt ttttatgttt
     9061 ctggtcttcc gtcgcggaat ttcattttaa tcgtattgct attaagttag ctgcactgtc
     9121 tgcctgagag gttaatgtgc tggcatttac cctacgcttt attaaaaaca aacgctattt
     9181 cgcgattctg gcgggggcgt tggttattat cgctgggttg gcctcacaac atgcctggag
     9241 cggtaacggt ctaccgcaga ttaacggtaa ggcgctggcg gcgctggcga agcagcatcc
     9301 ggtagtcgtg ttattccgcc atgccgagcg gtgcgatcgt tccgataata cctgcctgtc
     9361 agacagcacg gggattacgg tcaacggtgc gcaagatgcc agagcgctgg gtaaagcctt
     9421 cagtgccgat atacaaaatt acaatctcta ttccagtaat acggtgcgca ccatccagtc
     9481 ggcaacctgg ttttccgcag gcaggtcgct tacggcggat aaaaaaatga tggattgcgg
     9541 cagcggtatt tatgcttcaa tcaatacgtt actgaaaaag tcgcagaata aaaatatagt
     9601 catttttacc cataatcatt gtttgacgta tattgcaaaa aataagcgcg gcgtgaagtt
     9661 tgatccggac tatcttaatg cgctcgttat gtatgcggaa aacggaaaac tctttttaga
     9721 cggtgaattt gttcccggct agccgcatgt taaaagcgta aagacagcct gaagcggctg
     9781 tcgttattat aataaccctt tcaatgctaa tgtgtggcgt gtcgctacat tcaaatcata
     9841 cagcgccagt tcttctggct tgacccaggc gtagtcctga aattcgtcgt taatacatat
     9901 atcgcggtta gcggaaacac agtcgaagat gagataaatc atataaatct cttcttgtct
     9961 gccatcagcg tacgttttaa cgcggatatc gtcgcgaaag gtccacggcg taatatcgct
    10021 cagaatcagt tgttcgccga gttcctcccg aatctcccga cgcagcgcct cttcaatacg
    10081 ttcgcctggc tcgaccccgc cgcccgacag cgcccactga ccgggaaaga cgccgcggtt
    10141 gtcggccatt ttgcacagca gataacagcc atcattttga attaatgggc aaactatagt
    10201 tcgttgacgc ataagtcgct tccttaaacc accaggccat cagcttaaca aatcattctg
    10261 cgaaattctt tgtgaaaaat ggaagcgata acgcagactg cgttttttgt taattttgtt
    10321 gatgcaggcg tcgccatgtg atggcgcaat gatgcgtcac ggcgaaagta gtatttcgtt
    10381 acaatatgtt tttggaatgg tttcttagtg cattgattcc tcagcgtctg gcagtacaat
    10441 tctgccgttt tggggagttt ttctttatgt gcttgctgga aagggtaaaa atgaaaaaaa
    10501 gcatattatt aggttttgcc ggaatgctgt tcgtttctgc atcggcgcag gccatcagta
    10561 ttagcggcca ggcgggcgaa gattacacca acattggcgt gggttttggt acggaatcga
    10621 cgggactggc gctaagcggc aactggatgc acaacgatga tgatggcgac gctgcgggcg
    10681 tgggtctggg gctgaacatt ccggtgggac cgctgctggc gacggtaggc ggtaaaggta
    10741 tttataccaa tccgaaagac agcgatgaag gctatgcggc ggctgtcggc ggtgggttac
    10801 aatggaaaat cggcaacagc ttccgtctgt tcggcgagta ttattattca ccagattcgc
    10861 tgtccagcgg tatcgaaagt tatgaagaag cgaatgcagg cgcgcgtttc accattatgc
    10921 gcccgctgag cattgaagcc ggttatcgtt acctgaacct ggcgggtaaa gacggcaacc
    10981 gcgacaatgc gattgctgac ggcccttatg ttggcgtaaa cgccagtttt tgatgctaac
    11041 ggcgcggcaa tcgtcgcgcc atattcctcc ttttcccgtc attcttcttt ccacgtcata
    11101 ttcgtctttg cgttatagtg ttttcatcat aaaagcagga gaacacaatg ctaaatgtgg
    11161 aaatgctatc caccggggat gaggtgttgc acggacaaat cgttgacacc aatgccgcct
    11221 ggctggctga ttttttcttt catcagggcg ttccgttatc acggcgaaat acggtaggcg
    11281 ataatctgga cagtctggtc gctatcttgc gtgaacgcag tcaacatgct gatgttttga
    11341 ttgttaatgg cgggttaggg ccgaccagcg atgatttaag cgcgctcgcc gcggcaacgg
    11401 caaaaggcga aggattagta ctgcaccagg cgtggctgac cgaaatggaa cgttactttc
    11461 agcagcgtgg tcgcgtgatg gcgccgagca accgtaaaca ggcggaactg cctgccagcg
    11521 cggagtttat taataatccg gtcggcactg cctgtggatt tgcgctacag ctcaaccgct
    11581 gcctgatgtt tttcaccccc ggcgtaccgt cggaatttaa ggttatggtg gagaaggaaa
    11641 tcttaccgcg gttacgcgcg cgtttttcgc tgccggagcc gccgctttgc ctgcggttaa
    11701 cgacttttgg acgttcagaa agtgacctcg cgcagcgtct cgattcactg ccgttgccgc
    11761 ccggcgtgac gatggggtat cgctcatcaa tgccgatcat tgaactgaaa ttgaccggcc
    11821 cggcgacgca acgggaggcg atgctggcgt tatggccaga ggtcaaacgg gtcgccggac
    11881 agaacctgat ttttgaaggt acggaaaatc tgccggcgca aatagcccgc cgcctgcagg
    11941 aaaggcagtt gagtctgacg ttgagcgagc aatacaccag cggtttactg gcgctacagc
    12001 tttcccgtgc cggggcgccg gttcttgcca gcgaagtcgt tccttctcag gaagagacgc
    12061 tggcgcaaac ggcacactgg acgacagaac ggcgcagcaa tcattatgcc ggtctggcgc
    12121 tggccgtgtc ggggctggaa aacgaacatc ttaatttcgc gctggcgacg ccggatggca
    12181 cgtatgcctt acgcgtgcgt tttagcgcca atcggtatag tctggcaata cgtcaggagg
    12241 tctgcgcgat gatggcgcta aatatgctgc gccgttggct taatggcgag gacattacca
    12301 gcgagcatgg ctggatagac gtggttgaat cattgacatc ataatccctt tctcttatct
    12361 gcgatgggaa cgacatcgtg agccggataa ggccgctatg ccattatccg gcaatattat
    12421 ctgctttttt gtccagccaa ttgtactgaa tacaaagtaa tacgtgcgtt aattcacatt
    12481 tatatggtta acccttccac tccgttggaa ggcggataag ctttgacgcg cttcacaatt
    12541 ttttccctac tgacctttca cactgattcc agtgtctcag actggagtcc aatatgttgg
    12601 aatcaagtaa agtcccggct cttactcgcg caatcgacat cctcaatttg atcgcgcgta
    12661 ttggcccatg cagcgcggca atcattattg aaacgttgcg tattccaaaa agcaccgcgt
    12721 acctgctgtt gaatgaatta aaacgtcagc gatttattag cctcgatcat caggagaact
    12781 actgcctgtg gactaagctc gttgaattgt cgggtcatgc gctcagcaag atggatctga
    12841 gggagctggc gcgtcctcgt ctaacacaac tgatggatga aatcgggctg ctgtgtcact
    12901 tggggatcat cgaccacgaa aatgcgtatt acatactgaa agtggaatcc tcatccacta
    12961 tcagcgtgcg ctcgcatgag gggaaaagcc tctctcttta tcgttccggc atcggcaaat
    13021 gcctgctggc atggcagccg gccgccgtac gcaaagccat tattgaaaaa atggtatggg
    13081 agcgagccac gctgaccacc atcaccgagc cgcaacaatt gaatgatgag ctggaacgca
    13141 ttcgccagcg tggatggagc tttgataacg gggaggatta tccggatgtc cgctgcgttg
    13201 ccgcaccggt atttaatgcc agaaacgaac tgaccgcggc aatttcactg gtcggcacgc
    13261 gcctgcaaat caacgaagag aatcttgatt atttggccgg taaagctatt gcctgtgcca
    13321 aagatatttc acgcctgttg ggatggaaaa gtcccttcga ctcactcgca tcttaaaatg
    13381 gagaatatta tgactcttcc taaaattaaa cacgttcgag cctggtttat tgggggcgct
    13441 accgcagaga aaggggctgg cggcggggat tatcacgacc agggaggaaa tcactggatt
    13501 gatgaccata tcgccactcc catgagcaaa tatcgcgact atgagcagtc tcgtcagtct
    13561 tttgggatca acgtgttagg gacgctgatt gtcgaagtag aggcggaaaa tgggcagacg
    13621 gggttcgccg tttcgacagc aggggagatg ggctgtttta tcgtagaaaa acatcttaac
    13681 cggtttattg aaggcaaatg cgtaagcgat atcaaactta ttcacgatca gatgctcggc
    13741 gcgaccatgt actactccgg ttccggcggt ctggtgatga acacgatttc ctgtgtggat
    13801 ctggcgctgt gggatctgtt tggcaaggtg gttgggctgc cggtttataa attgctgggc
    13861 ggagcggtac gcgatgaaat tcagttttac gccaccggcg cacgcccgga tctggctaaa
    13921 gaaatgggct ttatcggcgg taaaatgccg actcactggg gaccgcacga tggtgatgcg
    13981 gggatccgta aagatgccgc gatggtggcg gatatgcgtg aaaagtgcgg gccggatttc
    14041 tggctgatgc tcgactgctg gatgagtcag gatgtgaact atgcgactaa actggctcac
    14101 gcctgtgcgc catttaatct caaatggatt gaagagtgtc tgccgccgca gcagtatgaa
    14161 ggctatcgcg aattaaaacg caacgcgcct gcagggatga tggttaccag cggcgaacac
    14221 catggtacgc tgcaatcctt ccgcactctg gcagaaaccg gcattgatat tatgcagccg
    14281 gatgttggct ggtgcggcgg attaaccacg ctggttgaga tcgccgcgct tgccaaatcg
    14341 cgcgggcaac tggtggtgcc gcacggttcg tctgtctatt cgcaccatgc agttattact
    14401 ttcactaata cccctttcag cgagttcctg atgaccagcc cggactgctc caccctgcgt
    14461 ccgcaatttg acccgattct cctggatgag ccggtgccgg tgaatggacg catccataaa
    14521 tcagtgctgg ataagccggg cttcggcgtc gagcttaacc gtgactgtca cttgaaacgc
    14581 ccttatagcc actaataact cgtgcgttgc ctttgtacgg caacgccctc atcctgttga
    14641 ggatattgct atgagcatca ctttacttga cggcgtagtg aagaaaaacc gcgcacgttt
    14701 aattcctttt atgttggcgc tgtacgtact ggcgtttctg gatcgttcaa atattggttt
    14761 tgccaaagag acctatcaga tagataccgg gctaagtaat gaagcctacg cgctaggggc
    14821 cggtattttc tttgtggttt acgctttcct tggcgtaccg gctaacctgc tgatgcgcaa
    14881 atttggcgca agaacctgga tcggcacgac taccctgctg tggggctttc tctctgctgc
    14941 gatggcctgg gcggatagtg aagcaaaatt tctgataatc cgcacgctat tgggcgcggc
    15001 ggaggctgga tttttccccg gcatgatcta tctaacttca caatggttcc cgcagcgtaa
    15061 ccgtgccagc attatggggc tattttatat gggcgcgccg ctggcgttaa cgttgggttc
    15121 gccgctctcc ggcgctctgc tggagatgca tggttttatg gggcacccgg gatggttctg
    15181 gatgttcgtt atcgaaggcc tactggcgat tggcgcaggg atattcacct ttttctggct
    15241 tgatgacact ccgcagcagg cgcgttttct tagcctggaa gaaaagaacg cgcttatcag
    15301 gcaactggcg agcgaagaag agaaaaaggt cacgtcaagg cttgcggatg cgctgcgtaa
    15361 tggacgcgtc tggcaactgg ctattattta tctgacgatt caggtggcgg tatacggact
    15421 catctttttc ctgccgaccc aggttgccgc gctattgggc actaaagtgg gctttaccgc
    15481 ttcggtggta acagcggttc cctgggtggc ggctttgctt ggcacatggc ttattcctcg
    15541 ctactccgac cgtaccggcg atcgccgtaa cgttgcggca gtgacgctac tggctgcggg
    15601 cattggcatt ggcctgtcag gtctggtttc tccggtgctc gctattctgg cgctctgtgt
    15661 tgcagcagta ggatttattg ccgttcagcc cgtattctgg accatgccaa cgcagctact
    15721 ttccggtacg gctctggcgg caggaattgg tttcgttaat ctgtttggcg ctgtgggcgg
    15781 ttttattgcc ccaattctgc gcgtaaaagc ggaaacgttg tttgccagcg atgcggcggg
    15841 cctgctgacg ctggccggag tcgccatcat tggctcatta attatcttca cgctgagcgt
    15901 taatcgtccg gtggcgcaat ccggcgctgc gcatcattaa tcttatctac gttgtaagga
    15961 tcgctatgaa cgcattgtta tcaaatcctt ttaaagaagg attacgtaaa agggatacgc
    16021 aaattggttt gtggctcagt tcaaccacct cttatatggc ggagattgcg gcgacgtcgg
    16081 gttatgactg gttgttaata gatggcgagc acgcgcctaa tacggtgcag gacttgtatc
    16141 atcagttaca ggccatcgcc ccatacgcca gccagccggt gattcgcccg atcgagggaa
    16201 gtaaagcgct cattaaacag gtactggaca tcggggcgca aacgctactg atcccgatgg
    16261 ttgacaccg
//
LOCUS       DAGWFR010000083        16084 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.085, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000083 DAGWFR010000000
VERSION     DAGWFR010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 16084)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16084)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16084
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.085"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..402)
                     /locus_tag="MOX77_002740"
     CDS             complement(<1..402)
                     /locus_tag="MOX77_002740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyethylthiazole kinase"
                     /protein_id="HCA3358222.1"
                     /translation="MQPDLHCRTLAAHTLKHFRALSPLTHCMTNDVVQTFTANTLLAL
                     GASPAMVIDPVEARPFAAIANALLINVGTLTASRADAMRAAVESAYDAKTPWTLDPVA
                     VGALEFRRRFCLDLLSLRPAAIRGNASEILAL"
     regulatory      complement(434..530)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            812..1126
                     /gene="rcnB"
                     /locus_tag="MOX77_002741"
     CDS             812..1126
                     /gene="rcnB"
                     /locus_tag="MOX77_002741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni(II)/Co(II) efflux transporter accessory
                     subunit RcnB"
                     /protein_id="HCA3358223.1"
                     /translation="MKSKLLPCALLLATSFAWAAPATTGIDQYELKSFIADFTHFKPG
                     DTVPQMYRTDEYNIKQWKLRNLPAPDAGTHWTYMGGAYVLINDTDGKIIKAYDGEIFY
                     HR"
     gene            complement(1388..2395)
                     /locus_tag="MOX77_002742"
     CDS             complement(1388..2395)
                     /locus_tag="MOX77_002742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative fimbrial-like adhesin protein"
                     /protein_id="HCA3358224.1"
                     /translation="MKLFLFIVMLLILPETYAACTGEITYQDNLIIREDFTINPNQSA
                     TYSHNFNDTTCSGTYKITRMDPSDIIVGLYNDTVKLKLKIAWADNNTLTMPFTTGYTV
                     TVEPASSGANVNISAGSGNSVLINGVVSITSASSATQFTASLRFLGCLLAGRGWNACA
                     ADYNSYLRGAGLYSFDLFVSYDRKQTTCKPEDLTITLPNIALSELYNTGKVSNKNAAD
                     NIRLQCDNLFGNAKQTSRKMTVYLSSSDLIPDSYSVLRGAVNNGVGFILESGGKTVNI
                     SNTAEQGNASTLWKVDQVGTPLNSDMITIPIIASYYVYDRDNIKPGDLKATALIYVKY
                     D"
     gene            complement(2411..4899)
                     /locus_tag="MOX77_002743"
                     /pseudo
     CDS             complement(2411..4899)
                     /locus_tag="MOX77_002743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461094.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial biogenesis outer membrane usher
                     protein"
     gene            complement(4913..5596)
                     /locus_tag="MOX77_002744"
     CDS             complement(4913..5596)
                     /locus_tag="MOX77_002744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria/pilus periplasmic chaperone"
                     /protein_id="HCA3358225.1"
                     /translation="MKILSAVLLSAIILPAHAGIVIYGTRVIYPAEKKEVVVQLVNQG
                     EQASLVQSWIDDGNTSLPPEKIQVPFMLTPPVARVAAESGQQIKIKKMPNSLPDNKES
                     LFYLNVLDIPPNSQENAGKNVLKFAMQNRIKLIWRPSRIAAVTKDSFQRIGLFRSNKT
                     VIMKNDTANWITVTDVKAGNTKINDQTIMLPPLSTQNINMKYASTSQYEVTIIDDNGN
                     YISSKINVK"
     gene            complement(5652..6182)
                     /gene="yehD"
                     /locus_tag="MOX77_002745"
     CDS             complement(5652..6182)
                     /gene="yehD"
                     /locus_tag="MOX77_002745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein YehD"
                     /protein_id="HCA3358226.1"
                     /translation="MKRSLIAASVLSAVFMSAGAFAVDEYDSGVLNINGKVVGTTCQF
                     LGTNTAEIRLNEIGADKIINLTPGQIYDAVTNQTQMPLKIKCQQGVAPRITFSSTQFD
                     SHDITFNNGSAKGVGFAVYYGSTDNQIDPETGVTLDPNSSGEYDLTFLARYARLDGDV
                     ASGDVSSTLTLTVVTD"
     gene            complement(6461..6742)
                     /locus_tag="MOX77_002746"
     CDS             complement(6461..6742)
                     /locus_tag="MOX77_002746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YehE family protein"
                     /protein_id="HCA3358227.1"
                     /translation="MKKYLLMGIIVSAYGISVPVFASDTATLTISGKVTAPTCSTEVV
                     NAQLQQRCGNTIHVSTLQTPAATPMRGVTTQLYTVPGDSTRQIVVNHYD"
     gene            complement(7020..8129)
                     /gene="apbC"
                     /locus_tag="MOX77_002747"
     CDS             complement(7020..8129)
                     /gene="apbC"
                     /locus_tag="MOX77_002747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster carrier protein ApbC"
                     /protein_id="HCA3358228.1"
                     /translation="MNEQSQAKSPDTLRAMVAGTLANFQHPTLKHNLTTLKALHHVAW
                     MDDTLHVELVMPFVWNSAFEVLKEQCSADLLRITGAKAIDWKLSYNIATLKRVKNQPG
                     INGVKNIIAVSSGKGGVGKSSTAVNLALALEAEGAKVGVLDADIYGPSIPTMLGAEDQ
                     RPTSPDGTHMAPIMSHGLATNSIGYLVTDDNAMVWRGPMASKALMQMLQETLWPDLDY
                     LVLDMPPGTGDIQLTLAQNIPVTGAVVVTTPQDIALIDAKKGIVMFEKVEVPVLGIVE
                     NMSMHICSNCGHHEPIFGTGGAQKLAEKYHTQLLGQMPLHISLREDLDRGTPTVVSRP
                     ESEFTAIYRELADRVAAQLYWQGEVIPGEIAFRAV"
     gene            8294..10327
                     /gene="metG"
                     /locus_tag="MOX77_002748"
     CDS             8294..10327
                     /gene="metG"
                     /locus_tag="MOX77_002748"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HCA3358229.1"
                     /translation="MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGH
                     EVNFICADDAHGTPIMLKAQQLGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDE
                     NRELSELIYTRLKENGFIKNRTISQLYDPEKGMFLPDRFVKGTCPKCKSADQYGDNCE
                     VCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTRSGALQEQVANK
                     MQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTT
                     SFDEYWKKDSDAELYHFIGKDIVYFHSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKM
                     SKSRGTFIKASTWLKHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVN
                     LASRNAGFINKRFDGVLAAELADPQLYKTFTDAAAVIGEAWESREFGKAIREIMALAD
                     VANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRVLMTYLKPVLPTLSERVEAFLN
                     SELNWDAIEQPLLSHKVNTFKALYNRIDMKQVEALVEASKEEVKAAAAPVTGPLADFP
                     IQETITFDDFAKIDLRVALIENAEFVDGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQ
                     ALIGRQTVMVANLAPRKMRFGVSEGMVMAAGPGGKDIFLLSPDDGAKPGQQVK"
     gene            10568..11026
                     /locus_tag="MOX77_002749"
     CDS             10568..11026
                     /locus_tag="MOX77_002749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YehR family lipoprotein"
                     /protein_id="HCA3358230.1"
                     /translation="MKISGKLLSAALASVLVFSLAGCGDKEESKTFNANLAGTEISIT
                     YTYKGDKIIKQTSESKISYATVGAKTKEDAAKILDPLSAKYKNIAGVEEKLTYEDTYA
                     QENVSVDMEKVDFKALQQISGTMVSGDTSKGISMKQTQTLLEAAGFKEAK"
     gene            11198..11728
                     /locus_tag="MOX77_002750"
     CDS             11198..11728
                     /locus_tag="MOX77_002750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YehR family lipoprotein"
                     /protein_id="HCA3358231.1"
                     /translation="MQVLRLMALPLFALSLSVSITGCDQKNDTLQGKQNNMTAFIKKI
                     AASKESEETQRYVGNLNGIEIKLTYYYKGDIVLRQISEHKLLYKTLKANNKEEAQKML
                     SQVGEAYQGMPGLTERIDYYDSYATEYVDIDFTQAKISDLCKLPGSSIDNCSAYYLSM
                     IRSQKLLEESGYHRIN"
     gene            complement(11785..12252)
                     /locus_tag="MOX77_002751"
     CDS             complement(11785..12252)
                     /locus_tag="MOX77_002751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1456 family protein"
                     /protein_id="HCA3358232.1"
                     /translation="MLSNDILRSVRYILKANNTDLARILALGNVDATPEQIAIWLRKE
                     EEEGFQRCPDIVLSSFLNGLIYEKRGKDEAAPALTAERRINNNIVLKKLRIAFSLKTD
                     DILAILTGQLFRVSMPEITAMMRAPDHKNFRECGDQFMRYFLRGLAAREHAAK"
     gene            complement(12299..13018)
                     /gene="yehT"
                     /locus_tag="MOX77_002752"
     CDS             complement(12299..13018)
                     /gene="yehT"
                     /locus_tag="MOX77_002752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator BtsR"
                     /protein_id="HCA3358233.1"
                     /translation="MIKVLIVDDEPLARENLRILLQGQDDIEIVGECANAVEAIGAVH
                     KLRPDVLFLDIQMPRISGLEIVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKP
                     IEEKRLEKTLHRLRQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMDDVAFVSSRM
                     SGVYVTSSEGKEGFTELTLRTLESRTPLLRCHRQFLVNMAHLQEIRLEDNGQAELILR
                     NGLTVPVSRRYLKSLKEAIGL"
     gene            complement(13015..14700)
                     /locus_tag="MOX77_002753"
     CDS             complement(13015..14700)
                     /locus_tag="MOX77_002753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HCA3358234.1"
                     /translation="MYEFNLVLLLLQQMCVFLVIAWLMSKTRLFIPLMQVTVRLPHKL
                     LCYVTFSIFCIMGTYFGLHIEDSIANTRAIGAVMGGLLGGPVVGGLVGLTGGLHRYSM
                     GGMTALSCMISTIVEGLLGGLVHSVLIRRGRPDKVFSPLTAGAITCVAELVQMLIILL
                     IARPFDDALHLVSNIAAPMMVTNTVGAALFMRILLDKRAMFEKYTSAFSVTALKVAAS
                     TEGILRQGFNEVNSMKVAQVLYQELDIGAVAITDREKLLAFTGIGDDHHLPGKPISSG
                     YTLKAIETGEVVYADGNEVPYRCSLHPQCKLGSTLVIPLRGENQRVMGTIKLYEAKNR
                     LFSSINRTLGEGIAQLLSAQILAGQYERQKALLTQSEIKLLHAQVNPHFLFNALNTIK
                     AVIRRDSEQASQLVQYLSTFFRKNLKRPSEIVTLADEIEHVNAYLQIEKARFQSRLQV
                     QLDVPSTLSRQKLPAFTLQPIVENAIKHGTSQLLDTGNVAIRARREGQHLMLDIEDNA
                     GLYQPSAGSSGLGMSLVDKRLREHFGDDYGISVACEPDCFTRITLRLPLEEDA"
     gene            14923..15654
                     /gene="mlrA"
                     /locus_tag="MOX77_002754"
     CDS             14923..15654
                     /gene="mlrA"
                     /locus_tag="MOX77_002754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator MlrA"
                     /protein_id="HCA3358235.1"
                     /translation="MALYTIGEVALLCDINPVTLRAWQRRYGLLKPQRTDGGHRLFND
                     ADIDRIREIKRWIDNGVQVSKVKVLLSSDSSEQPNGWREQQEILLHYLQSSNLHSLRL
                     WVKERGQDYPAQTLTTNLFVPLRRRLQCQQPALQALLGILDGILINYIALCLASARKK
                     QGKDALVIGWNIHDTTRLWLEGWVASQQGWRIDVLAHSLSQFRPELFDGKTLLVWCGE
                     HQTLAQQQQLLAWRAQGHDIHPLGV"
     gene            15714..15821
                     /locus_tag="MOX77_002755"
     CDS             15714..15821
                     /locus_tag="MOX77_002755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YohO"
                     /protein_id="HCA3358236.1"
                     /translation="MRVAKIGVIALFLLMAIGGIGGVMLAGYSFILRAG"
     gene            complement(15802..>16084)
                     /locus_tag="MOX77_002756"
     CDS             complement(15802..>16084)
                     /locus_tag="MOX77_002756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HCA3358237.1"
                     /translation="MGMSRRQQLYQVELPLAAPVILAGIRTSVIINIGTATIASTVGA
                     STLGTPIIIGLSGFNTAYVIQGALLVALAAIIIDRLFERLTRALTRHAK"
BASE COUNT         4274 a         4109 c         3640 g         4061 t
ORIGIN      
        1 taacgccagg atttccgagg cgttgccgcg tattgccgcc gggcgcaggg acaagagatc
       61 caggcaaaat cgccgacgaa attccagcgc gcccaccgcg acaggatcaa gcgtccacgg
      121 cgttttggca tcataagcgc tttctaccgc cgcacgcatc gcgtcagcgc gtgaggcagt
      181 taatgttccg acattaatca gcaaggcgtt ggcgatggcg gcaaacggtc tggcctcgac
      241 aggatcaatc accatggcgg gtgaagcgcc cagcgccagc aacgtattgg cggtaaacgt
      301 ttgtacgacg tcattcgtca tacagtgcgt aagcggggag agcgcgcgaa agtgttttaa
      361 cgtatgcgcc gcaagcgtgc ggcagtgcag gtcaggctgc atggttcagc tcctgcccgc
      421 gtgaagaagg gacacgagca gtgtcagact tccctacgct ggcattatcc agatcaggtg
      481 gtacgggtat ttctcagcct tcacaaagaa gggcaccccg agtcgtcaag ccccaccgtg
      541 ttaagcgggg tttcgctatt aagcatactg tctgtgccag acaatgtaaa tttacagtca
      601 gcggcggacg ataattttag cgttatcaga tagttctcaa aacctattcg gttctggcaa
      661 acttgctggc ggatatgttg ctgcacgacg ctttcgttta cactttttac gaaaaggggc
      721 gtgagataac aaaatagcgc ttgtcagata cgccaccagc agaaatgata cacacgatgt
      781 taactgaccc gcatatgtgg agggtaaaag tatgaaaagt aagttgctgc cttgcgcgct
      841 gttgcttgca accagttttg catgggccgc ccccgcgaca acgggcattg atcaatatga
      901 gttaaaaagc tttatcgccg acttcaccca cttcaagccc ggcgataccg ttccgcaaat
      961 gtaccgcacc gatgagtata atattaaaca gtggaaatta cgtaatctgc ccgcgccaga
     1021 tgccggtact cactggacct atatgggcgg cgcgtatgta ctgattaacg ataccgatgg
     1081 aaaaatcatc aaagcctatg atggcgagat tttttatcat cgataaaaaa agccccctca
     1141 tccagagggg gaaatacagc cccatgttac ttttttatta gcccttaatc actctatccc
     1201 cttcaaacct cctttttgtt gactgccttc actacccgat tcgctctgga tctcgccctt
     1261 ttgaaactac cgcataccac attagaattt attgcagaaa gattgtcatc ccggtcactt
     1321 attattgtaa gtgaccggaa gttcattcac ctatcgcgcc atatatctta aatgtttttc
     1381 atatatatta atcgtatttc acatagatca gcgcagtcgc ttttagatcg cctggcttta
     1441 tattgtctcg gtcataaaca taataactgg cgataatagg gattgttatc atatcactgt
     1501 tgagcggcgt gcctacttga tccactttcc ataacgttga agcattaccc tgctctgctg
     1561 tatttgaaat attcaccgtt tttccaccgc tctccagtat aaatccgacg ccattattca
     1621 cagcaccacg caacacagaa tagctatctg gtattaaatc actgctggag agataaaccg
     1681 tcattttacg cgatgtttgt ttagcattac caaaaagatt atcacactgg agtcgaatat
     1741 tatccgcggc atttttgttg ctgaccttgc ctgtgttata taattcagaa agcgcaatat
     1801 tcggtagcgt gatcgtcaga tcttcaggtt tgcaggttgt ctgcttgcga tcgtaggaca
     1861 caaacagatc aaatgaatat aaccctgcac ctctaagata actattataa tctgcggcac
     1921 aggcattcca gcctcttcct gctagcaggc accctaaaaa ccgcaaactg gccgtaaact
     1981 gagttgcaga agaagcgctt gttattgata ccaccccgtt gattaggaca ctgttcccac
     2041 taccggcaga aatatttaca ttcgccccag aggaagcggg ttcaaccgtt accgtatagc
     2101 ccgttgtaaa cggcattgtg agagtattat tatctgccca ggcgattttt aacttcagtt
     2161 ttactgtatc attgtataat cccacgatga tatcggaagg atccatacgc gttatcttat
     2221 aagtccctga acaagttgta tcgttaaaat tatggctata agttgcggac tgattagggt
     2281 taatcgtaaa atcctcacga ataattaaat tatcctgata agtaatttct cccgtacagg
     2341 ctgcgtatgt ttcaggtaaa atcaataaca tcacgataaa aagaaagagt ttcatttcac
     2401 cacctcacca ctaccgacaa atataaactt tactttcatc aaccgttttt ccaaaggtga
     2461 ttgaacatga aagcccctgc tctttatcta ctggtacact gacttcgggc ggaatatcat
     2521 tcgttcgaat aaatagctga ctaccttgtc caacaatgcc cacattatga ccatgatgat
     2581 ctactacatc ataaccaaaa ataagaggcg agccatcagg acgctgcgct ttaataaacc
     2641 atggtttacg ctggtcggta tcaaaattca ctagcacgac ggcccctcgg tacggggcgg
     2701 caactttacg gttaccgcgt aattccgttt cactgctact ttgcgacaca tcaagcataa
     2761 gatggttttc gcgatatggc gtaaggttgt cataaaccac cgttcctttt ttattggtgg
     2821 tccgatattt ttggccgtta acgtaggctc cttcaagtcc cggagcctgc ataatcgcaa
     2881 aggtatctga aagccggctg gataaattca acccgccact ccaggctaca accccaccgg
     2941 aaatacttcc gccggtctga gtataattgg acgactggct gtaactacca ttaagcgttg
     3001 caacgggcgt attccaggtt aaattcgtcc ccgctgtggt ctcactatcg tgtcgctgat
     3061 gactaacatt cacgccgtaa ttaaattgat cgcgactgcc tgccgtaccg gttaaaccaa
     3121 tattgtttga ggtaaatcca tcatcatcaa aggtcgtcga gttcgacaca ttcagatgac
     3181 gccgcggggt agtaataccg tccccccagt caaagggaat tgaaataaac aggttaaaac
     3241 gtttatcttc attatgatcc tcgtcgtaag tctgactggc ggataacgta taattaattt
     3301 tctggaacgt attggaatag cttatttgat aatctttact ggtgccgcta cgtccccagt
     3361 aatcacgcca taatgcactc agtgatactg cgccccatcc ttctggcaag gattggctca
     3421 cattagctga aaacgtattt ttacgcccaa aatcgttttg ataataatca gcaatatcgt
     3481 atacatcatt cttatcgcga cgatagttat ttttattatt ggcccagaca tgatcgttaa
     3541 atgtgcggta atcctgtgat gaataccgat acgcagccag accaaaccga gttaatgttt
     3601 gggtcaggta tttattataa gcaatctgat aactctgacc atcaaataca tcgccattat
     3661 cctgtttact gtgcgctcgc gtagcgtcaa gcgaaatggc gccaatccgg gtattccacc
     3721 ccgtgccgag ggtaaacgca ttataatggt tcgatagcat cgtaccgcca taaagcgtca
     3781 acaggttatt aaggccatac tgataactga tttgtgtaaa atcggcctga ttatcggcgc
     3841 cttcaatatg actacggccg gcggaaaaat catacttaga gacgccaggc tgcaacatgt
     3901 tcggtacgga agcgtaaggc accagccagg tatttatcga accatccgcc tcacgcacgg
     3961 tgacatcaag atccgcgcca ccgcccgcga gttgcagatc cgcaatggaa aaggggccag
     4021 gaggaacctc tttctgataa acaacgaatc cgttctgttc gatggttacc aaagcgttag
     4081 tctgtgcaat cccctgcacc aacggcgtaa aattctgttt cgagtttggc aacatttgca
     4141 tatcgcggaa caggcgaacg ccggtaaatc tcacagaatc aaaaatctct gacgaggtat
     4201 actgatcccc ggcgcgtaat gtgccgagga gctcagcgat accgcgctcc agatacaatg
     4261 tgttgctttt ccactcaccg ctgctgccat cggttttatt aaatgtggta tccgcatgcg
     4321 cttgccagcc caacagattg aaaccgctat tgaaccgaac gtaagtactt tcactactgc
     4381 cagaattctt atagtcactg taatactggc tggcatagta agaagtataa aatgcattga
     4441 tgccgcgatc ccagttttca ggcaatacat aacccgcctc gacctcattt acataggcct
     4501 ggggaacgct caaatccagc cgaaaaacgc caatattaaa agtatagcca ccgcttctca
     4561 cgacatcttt taacgcaata caatccgttg ctccctgcgg ttgcagacca tcgcttatca
     4621 caccaatatt tttcaacaac tcagttgaaa tacacgtgct accgggatca tcggcaacaa
     4681 tgatatcgta tttacctcgc cattgattgt tgacataaat atccaattcg tactgtcccg
     4741 gaattggctt attctcatcc agatggaaat ttgttatttt ttgatctctc attcccccac
     4801 cataaaatga gtatcaaacg tttccgtcgc gatagcctgc gtttgccagg taaacagagt
     4861 caataaaaca agcgaagcga tgggcgtcat ccttagcatg atgaactcct gtttatttta
     4921 cattaatttt gctactaata tagttaccat tatcatcaat aatcgttact tcatactggc
     4981 ttgttgacgc atatttcatg ttaatatttt gcgtcgatag cggtggcagc atgatagttt
     5041 gatcattaat cttagtattt cctgctttta catccgtcac ggtaatccag tttgcagtat
     5101 catttttcat gatgacagtt ttattactgc gaaataaacc aatcctctga aaactgtctt
     5161 tggttacggc ggcaattcga ctggggcgcc atattaattt tattcgattc tgcattgcga
     5221 atttaagcac atttttaccg gcgttttctt ggctgtttgg tggaatatca agcacattca
     5281 gataaaacag actttctttg ttgtccggta agctattagg cattttcttg attttgatct
     5341 gctgaccaga ctcagcggca acgcgcgcca ctggcggcgt cagcataaat ggcacctgaa
     5401 ttttttctgg cggtaatgaa gtgttaccgt catcaatcca ggactgtacc agcgaagctt
     5461 gctcgccctg attcaccaat tgtacaacga cttctttctt ctctgccggg taaatcacac
     5521 gcgtaccata aataacaata ccagcatgcg caggcaaaat tatggcagat aataatactg
     5581 cagataatat tttcatattt acacggcctt gcttataaaa aaccggcgac gaacgccgcc
     5641 ggttgaataa attagtcagt aacaaccgtt aaagtcagtg ttgagctaac atcaccagaa
     5701 gcaacatcac cgtctaaacg cgcatagcgt gctaaaaaag tcaggtcgta ttcaccgctg
     5761 ctatttggat ctagtgtcac ccccgtctct ggatcaatct gattatccgt acttccgtag
     5821 taaaccgcaa aaccgacacc tttggcagac ccgttattaa atgtgatatc gtggctgtca
     5881 aattgcgttg aagagaaggt aatacgcggc gctacaccct gttgacattt tattttcaac
     5941 ggcatctgag tttgattagt tactgcgtca taaatctgac ccggggttaa attaattatt
     6001 ttatccgcac caatttcatt cagtctaatt tcagcggtgt tcgtacccaa aaattgacag
     6061 gtagtaccaa ccacctttcc gttaatattc agaacgcctg aatcatactc atcaacagca
     6121 aaagccccag cgctcataaa tacagcagac aatacagaag cagcaataag tgaacgtttc
     6181 ataatctctt ccttaatgaa gtaatttcta tttgttaaga gttattaacc cttgcaacga
     6241 aaattctcat agacaggaag ttatcgcaat gtaaacacga tgttttgttg atttaaaaca
     6301 atttacagat tgcaatataa ttgcaacaaa taatcattgc ttatcattat tttgtaaact
     6361 tattaatttc cgaaatttac tgcccttaaa cataaacaca acaaataaaa aagcccatat
     6421 cattgatatc aatgatatgg gcctgcggaa ttaataagaa ttagtcgtaa tgattaacaa
     6481 caatctgtcg ggtgctatca ccaggcaccg tgtatagctg cgttgtcaca cctctcatcg
     6541 gcgtagcggc gggtgtttgc agagttgaaa cgtggatagt gttgccgcaa cgctgctgca
     6601 actgtgcgtt taccacttct gtactgcacg ttggcgcggt cacttttcca ctgatggtta
     6661 atgttgcggt gtcggaggca aaaacaggta cgcttatccc ataagccgaa actataattc
     6721 ccatcagcaa atattttttc atagtgagta attgttcctc tggtgaacgt caaacagtat
     6781 gcaggccgtc ctgatgagca gtatgaacgt atcgatacct taaaaccaat tgaaaaaata
     6841 aatcagtagg ataggtatga tcaattcaaa taatgttttt gccgattatt tcagataaac
     6901 acctgtctgt ttaagcagga attaacaatg cgggggctat tattttatta atacattcac
     6961 tgcatcaata tatattaatg cagtgaatgt catattctct ttggaatacg tcaggaggat
     7021 tacaccgcgc ggaaggcgat ttctcccgga atcacttcac cctgccagta aagctgtgcc
     7081 gcaacgcgat cggccagttc gcgatagatc gcggtaaact cgctctccgg acggctaacc
     7141 accgtcggcg taccgcgatc gagatcttca cgcagactaa tatgcagcgg catctgaccc
     7201 agaagctgag tatggtattt ttccgccagc ttctgcgcgc cgcccgtgcc gaagatcggt
     7261 tcgtgatggc cgcagttgct acaaatatgc atactcatat tttccacaat gccgagcacc
     7321 ggcacttcca ccttctcgaa catcacgata ccttttttgg cgtcgattag cgcgatatcc
     7381 tgcggcgtag tcaccaccac cgcgccggta acaggaatgt tctgcgccag cgttagctga
     7441 atatccccgg ttcccggcgg catatccagt accagataat ccagatccgg ccacagcgtc
     7501 tcctgcaaca tctgcatcag cgccttactg gccattgggc cgcgccatac catcgcgtta
     7561 tcgtcagtca ccagatagcc gatcgagttg gtcgccaggc cgtgagacat aatcggcgcc
     7621 atatgcgtac cgtctggcga tgtcgggcgc tgatcttctg cgccaagcat ggttgggatc
     7681 gacggaccgt aaatatcggc atcgagaacc ccgacctttg cgccttcagc ctctaacgcc
     7741 agcgccaggt ttaccgccgt ggacgattta cccaccccgc ctttaccgga gctcacggca
     7801 atgatgtttt tcacgccatt aatgccaggc tgatttttga cgcgtttcag cgtcgcaatg
     7861 ttgtacgaca gtttccagtc gatcgctttt gcgcccgtaa tacgtaacag atcggcgctg
     7921 cattgctctt ttaatacctc aaacgcgctg ttccagacga acggcatgac cagctcaacg
     7981 tgcagcgtat catccatcca ggcgacgtgg tgcaacgcct taagcgtggt gaggttatgc
     8041 ttcagggttg ggtgctgaaa attcgccagc gtcccggcga ccatcgctcg cagggtatct
     8101 ggtgatttgg cctgggattg ttcgttcatc ccgactcctt ttgtagttct gaaaagtacg
     8161 attgtaactt tgtagtttac tccagcggta acaattattc atttacggat aaatgccctt
     8221 atcgattggc gcagtaatta ccattttggt actatcaaag ccctttttta caacagaaga
     8281 agtaataccc actatgactc aagtcgcgaa gaaaattctg gtaacgtgcg cgctgccgta
     8341 cgccaacggc tctatccacc tcggccatat gctggagcac atccaggctg atgtctgggt
     8401 ccgttaccag cgaatgcgcg gccatgaggt taacttcatc tgtgccgatg acgctcatgg
     8461 cacgccgatc atgctgaaag cgcagcagct tggtattaca ccggagcaaa tgatcggtga
     8521 aatgagccag gagcaccaga ccgatttcgc cggttttaat attagctacg acaactacca
     8581 ctcaacgcac agcgacgaga atcgcgagct gtccgagctg atttatacgc gcctgaaaga
     8641 gaacggtttt attaagaacc gcaccatctc tcaactctac gatccggaaa aaggcatgtt
     8701 cctgccggat cgatttgtga aaggcacctg cccgaaatgt aaatccgcgg accagtacgg
     8761 cgataactgt gaagtctgcg gcgcaactta cagcccgacc gaacttatcg agccgaaatc
     8821 cgtggtgtcc ggcgcgacgc cggtaatgcg tgactccgag cactttttct ttgacctgcc
     8881 gtcattcagc gaaatgttgc aggcgtggac ccgcagcggc gcgctgcagg agcaggtggc
     8941 gaacaaaatg caggagtggt ttgaatccgg cctccagcag tgggacattt cccgcgacgc
     9001 gccgtatttt ggtttcgaaa tcccgaacgc gccgggcaaa tatttctacg tctggctgga
     9061 cgcgccgatt ggctatatgg gctccttcaa aaatctgtgc gataagcgcg gtgacacgac
     9121 cagttttgat gagtactgga aaaaagactc cgacgccgag ctgtatcact ttatcggcaa
     9181 agacatcgtc tatttccaca gcctgttctg gcctgccatg ctggaaggca gccacttccg
     9241 taagccgacc aacctgttcg ttcacggtta cgtgacggtg aacggcgcga agatgtctaa
     9301 gtctcgcggc acctttatta aggccagcac ctggctgaaa cactttgacg ccgacagcct
     9361 gcgctactac tacaccgcga agctttcttc acgcattgat gacatcgacc tgaacctgga
     9421 agactttgtc cagcgcgtca atgccgatat cgtcaataaa gtagtcaacc tggcatcccg
     9481 taacgccggt tttatcaata agcgtttcga cggcgtgctg gcggctgaac tggccgatcc
     9541 gcaattgtac aaaaccttta ctgacgccgc tgcggtgatt ggcgaagcat gggaaagccg
     9601 tgaattcggt aaagctatcc gtgagattat ggcgctggcc gacgtcgcta accgttatgt
     9661 tgacgagcaa gcgccgtggg tggtggctaa acaggaaggc cgcgacgctg acctgcaggc
     9721 catttgctcg atgggcatca acctgttccg cgtgctgatg acgtatctga aaccggtact
     9781 gccgacgctt tctgaacgcg ttgaagcctt cctgaacagc gaactgaact gggatgccat
     9841 cgaacagccg ctgctcagtc acaaggtcaa cacctttaag gcgctctaca atcgcatcga
     9901 catgaagcaa gttgaagcgc tggttgaagc gtctaaagaa gaggtgaaag ccgcagccgc
     9961 gccggttacc ggcccgttag ccgacttccc gattcaggaa accatcacct ttgacgattt
    10021 cgccaaaatt gacctgcgcg tagcattgat tgaaaacgct gagttcgtag atggttctga
    10081 caaattgctg cgtctgacgc tggatctggg cggcgagaag cgtaacgtct tctccggcat
    10141 tcgttccgcc tacccggacc cgcaggcgct gatcggccgc cagacggtaa tggtcgccaa
    10201 cctcgcgccg cgcaaaatgc gctttggcgt ctccgaggga atggtgatgg ccgcaggacc
    10261 tggcgggaaa gatatcttcc tgttaagccc tgatgacggc gcgaagcctg gccaacaggt
    10321 gaaataagca acaagccgga gcatgctccg gcttttttaa ccgcttaatc ctgactggca
    10381 tatcacccca tccgcgtgtt ttaacttttt ccttaataag caatagcgtt aagactccat
    10441 atccggactg ctaaataacg gctaaaagtc atattctatc tctccctgat acattgctat
    10501 tactgggtta aattaattca ttgaaattat tttaaaaacc caatcattat ataaaatgga
    10561 gttttagatg aaaatttctg gcaagttatt gtccgcggct ttggcttccg tactggtgtt
    10621 ctctcttgct ggctgtggcg ataaagaaga atcaaagacc tttaacgcaa acctggcggg
    10681 gacagaaatt tcaattactt acacctataa aggtgacaaa atcattaagc agacgtctga
    10741 aagtaaaatc agctatgcca ctgtaggcgc taaaacgaaa gaagatgccg ccaaaattct
    10801 cgatccgctg agcgcgaaat ataaaaatat cgccggagtg gaagaaaaat taacctatga
    10861 agatacctat gcccaggaaa acgtctctgt ggatatggaa aaagtggact ttaaagcgtt
    10921 acagcaaatc tcagggacga tggtgtccgg cgataccagc aaaggtatca gcatgaaaca
    10981 aacccagacg ctgctggaag ctgctggttt taaagaagcg aaataactgg caggcataat
    11041 gtattgcatc gactggtaaa gtcgctcagg gcgctgcttc ggcagcgtct tttctttatg
    11101 aattccgaaa aaagacagcc tcgctgtaag tcccctcgcc aaagcctata atccctgaat
    11161 tcctggccac accaatactt aacgacaagg aattgttatg caggttctac gtcttatggc
    11221 actgccacta ttcgcgctct ctctatcggt tagcataact ggctgcgatc agaaaaacga
    11281 tactctccag ggaaagcaaa ataacatgac agcgtttatc aagaagatag ccgctagcaa
    11341 agagtcagag gaaacacaac gctatgtagg taatctcaac ggtattgaaa tcaagttaac
    11401 ctattactac aaaggggata tcgttttacg tcaaatatct gaacataaac tactttataa
    11461 gaccctgaaa gccaataata aagaagaagc acaaaaaatg ctgagtcaag tcggcgaagc
    11521 ttatcagggt atgccgggtt tgactgaacg aatcgactat tatgatagct atgctacgga
    11581 atatgtggat attgatttta cccaggcaaa aataagcgac ctctgtaaat tgccaggatc
    11641 atcaattgac aactgttccg cgtactatct gtcaatgatt cgctcgcaga aactgttgga
    11701 agagagcggg tatcatagaa tcaattagta taataatgcg ttttcccggt cagacaggac
    11761 gctgccggga acaataccgc agaattactt cgccgcgtgt tcacgggccg ccagaccgcg
    11821 cagaaaataa cgcataaact gatcgccgca ttcgcggaag ttcttatggt ccggcgcgcg
    11881 catcatcgcg gtgatctctg gcattgagac acgaaacaac tgaccggtaa gtatcgccag
    11941 gatatcatct gtttttagcg aaaaggcaat acgcagcttt ttcagcacaa tattgttgtt
    12001 gatacgacgt tccgccgtca atgcaggcgc cgcctcatct ttgccgcgtt tttcataaat
    12061 gaggccattg agaaatgagg acaacacgat atccgggcaa cgctgaaacc cctcttcctc
    12121 ttctttgcgc aaccagattg ctatctgctc cggcgtagca tcaacgttac ccagcgccag
    12181 gatacgcgcc agatcggtat tattagcttt taaaatgtag cgcacgctac gcagaatatc
    12241 gttactcagc atgaggcctt cggtcgtttc tatggcaaaa cgatattcta acagtctttt
    12301 acaggccaat cgcctctttt aaacttttca gatagcgacg gcttaccggc accgtcaggc
    12361 cgttgcgtaa aatcagctct gcctgcccat tatcctccag ccgaatttcc tgcaaatggg
    12421 ccatattcac cagaaactga cgatgacaac gcagtagcgg cgtccggctt tccagcgtgc
    12481 gcagcgtcag ctcggtaaac ccctctttcc cttcactgct ggtcacataa acgccgctca
    12541 tacggctact gacaaaggcg acatcatcca tttgcaacaa atagatccgg ctgtgtccgg
    12601 tacagggaat gaatttaagc gcctgctggt tttccggcaa caacgaaaca tcctgtttac
    12661 tgcgctcctg acgcagacga tgtaacgttt tttccagccg tttctcctct atcggcttga
    12721 gcagataatc aaaagcgtgt tcttcaaagg ctttgatggc gtattcgtca aacgcggtta
    12781 aaaaaacgat atacgggcgg tgttccggat caagcattcc tactatctcc agtccactga
    12841 tacgcggcat ctgaatatcc agaaacagca catcaggtcg caacttatgt accgcgccaa
    12901 tcgcttctac cgcgttcgcg cactctccca caatctcaat gtcatcctgc ccctggagca
    12961 aaatccgcag attttcccgc gctaacggct catcatccac aatcagcact ttaatcatgc
    13021 gtcctcctcc agtggaagtc gtaatgtaat tcgggtaaaa cagtccggct cgcaggccac
    13081 gctaatacca taatcatcgc caaagtgttc gcgcagacgt ttatccacca gactcatccc
    13141 cagcccgcta ctgccggcgg aaggctgata cagtcccgca ttatcttcaa tatctaacat
    13201 caaatgctgc ccttcgcgcc gggcgcgaat agcgacgttg ccggtatcaa gcagttgcga
    13261 cgtgccatgt ttaatggcgt tctcaacaat cggctgtaat gtaaacgcag gcaatttctg
    13321 acgtgaaagc gtcgatggaa catcaagctg tacctgcaga cgcgactgaa aacgcgcttt
    13381 ttcaatttgc aggtaagcgt tcacgtgttc aatttcatcc gccagcgtga cgatttccga
    13441 cgggcgtttt aaatttttgc gaaaaaaggt cgacaagtac tgcaccagtt ggctggcctg
    13501 ttcgctgtcg cggcgaatca ccgctttaat ggtattgagc gcattaaaca gaaaatgcgg
    13561 attcacctgc gcgtgcaaca gcttgatctc tgactgcgtc agcaacgcct tctgccgttc
    13621 atactgcccg gccaggatct gcgcggataa aagctgcgca ataccctccc ccagagtacg
    13681 gttaattgag ctgaacagtc ggtttttcgc ttcgtacaat ttaatggtgc ccatgactcg
    13741 ctgattttcg ccacgcagcg ggatcaccag cgtcgagccg agtttacact gcgggtgtag
    13801 cgaacagcga tacggcactt cgttgccatc ggcataaacc acctctccgg tttcaattgc
    13861 tttcagcgta taacctgatg aaatgggttt gcccggtaga tggtgatcgt cgccaatacc
    13921 agtaaaagcc agcagttttt cgcgatcggt gatggcgacg gcgccaatat ccagctcctg
    13981 atataacacc tgcgccacct tcatactgtt cacttcgtta aatccctgac gcagaatccc
    14041 ctccgttgac gcggcgacct tcagcgcggt aacagaaaat gccgaagtat atttttcgaa
    14101 catggcgcgc ttatcgagca aaatacgcat aaacagcgcg gcgccaacgg tattcgtcac
    14161 catcatcggc gcggcaatat tactgaccag atgcagggca tcgtcaaacg gcctggctat
    14221 cagtaaaatg atcagcatct gcaccagttc ggcaacacac gtaattgctc ccgccgtcag
    14281 cgggctaaac actttgtccg ggcgtccgcg acgtatgaga acgctgtgta ccaacccgcc
    14341 cagcagccct tcgacgatgg tggaaatcat acagctcagc gccgtcatgc cgcccataga
    14401 ataccgatgt aacccaccgg tcagaccgac cagcccgccg acgaccggcc cgccgagtag
    14461 gccgcccatc accgcgccaa tcgcgcgggt attggcaatc gaatcttcga tatgtagccc
    14521 aaaataagtg cccataatgc agaagataga aaacgtgaca taacacagaa gcttgtgcgg
    14581 cagacgaacc gtgacctgca taagcgggat gaacaggcgc gttttactca ttagccacgc
    14641 aatgaccaga aacacgcaca tctgctgaag cagcagcaac accagattaa actcgtacat
    14701 acccgcaaac cacacttcaa ttaaaagcgc gtaacataca ttgagtacga ttaactttct
    14761 ttgaactgtt gcataaaaat atgaattcgt gaatacgatc acttaaacgc cgcgccgcaa
    14821 cccgctactt cgcgttttaa tgcataaaaa acaggcaaaa cttcctggtt cctaaaagag
    14881 cgtctaaagt taaaccggga cctcgcgagc aagggtgaaa cgatggcgct ttacacaatt
    14941 ggtgaagtgg ctttgctttg tgatatcaat cctgtcacgt tgcgcgcgtg gcagagacgt
    15001 tatggacttt taaaaccaca gcgaacggat ggcggtcatc gtctgtttaa cgatgccgat
    15061 atcgacagaa tccgcgaaat caagcgctgg atagataacg gcgtccaggt cagcaaagtc
    15121 aaagtgctgc tcagtagcga cagtagcgaa caacctaacg gctggcgcga acagcaggag
    15181 atcctgctgc actacctgca aagcagtaat ctgcacagtt tacggttatg ggtcaaagaa
    15241 cgcggtcagg attatcctgc ccaaacattg accactaacc tgttcgtccc actgcggcga
    15301 cgattacagt gccaacaacc cgcccttcag gcgctgctcg gcattcttga cggtatcctg
    15361 atcaactata ttgcgctctg cctggcgtct gcgcgtaaga aacagggaaa agatgcgttg
    15421 gtgatcggct ggaatatcca tgataccacc cgcctgtggc tggaaggttg ggtcgccagc
    15481 caacagggat ggcgaatcga cgtgttggcg cattcgctta gccagttccg cccggaactt
    15541 tttgacggca agacgttact ggtatggtgc ggagaacacc agacgctggc gcagcagcag
    15601 caactcctgg catggcgcgc ccagggacac gacattcatc cccttggcgt ttaaacagca
    15661 gctaacaaat tcgctttaat gtatactcct tttattaaca taaggagtac ataatgcgcg
    15721 tagcgaaaat cggggtgatc gcccttttcc tgctgatggc tattggcggt atcggcggcg
    15781 tgatgctggc aggttacagt tttattttgc gtgccgggta agcgcgcgcg tcagcctttc
    15841 aaacaggcga tcgataatga tcgccgccag cgccaccagc agcgccccct ggataacata
    15901 ggccgtatta aagccgctaa gcccgataat gatcggcgtg cctaacgtac tggcccccac
    15961 cgttgaagcg atggtcgccg taccaatatt gataatcacc gaggttcgga tgcccgccag
    16021 aatcaccggc gcggccagcg gcagctcaac ctgatacaac tgttggcgac ggctcattcc
    16081 cata
//
LOCUS       DAGWFR010000084        16034 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.086, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000084 DAGWFR010000000
VERSION     DAGWFR010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 16034)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16034)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16034
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.086"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..1002
                     /gene="nrfEF"
                     /locus_tag="MOX77_002757"
     CDS             <1..1002
                     /gene="nrfEF"
                     /locus_tag="MOX77_002757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016507453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase NrfEFG subunit NrfEF"
                     /protein_id="HCA3358238.1"
                     /translation="FWDPVENASLLPWLAASALLHSLYVSRQRGSFRHWSLLLAILTL
                     ILSLLGTLIVRSGILLSVHAFALDNVRAVPLFILFAALSLASLALYGWRAREPYPATR
                     LGGGKCETLILATLLLFSAVLLIVLVGTLYPMIYGLMGWGRLSVGAPYFNRVTLPFGL
                     LMLVVIVLATIRSRKVSVHRQLPALLAHTGVFIFAAGIMVSSGSRHEISLNLSPGQQV
                     VLAGYTFRFERLDLEAKGNYTSEKARITLWRNEKRIGSLQPERRFYAARRQQMMEPGI
                     HWNLLHDWYAVMGEKTGADRYAMRLYVQTGVRWIWGGGLLMVCGALLSGWRGRKRDA"
     gene            1118..1504
                     /gene="nrfF"
                     /locus_tag="MOX77_002758"
     CDS             1118..1504
                     /gene="nrfF"
                     /locus_tag="MOX77_002758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001042069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase NrfEFG subunit NrfF"
                     /protein_id="HCA3358239.1"
                     /translation="MVLFLITFATHAQVVDTWRFDNPQQQEKALSIAGQLRCPQCQNQ
                     NLLESNAPVAVSMRHQVYSMVAEGKSEAEITAWMTDRYGDFVRYNPPLNEQTLLLWAL
                     PCLLLLLVGVVVWRVRKRQHAEEGEQ"
     gene            1501..2121
                     /gene="nrfG"
                     /locus_tag="MOX77_002759"
     CDS             1501..2121
                     /gene="nrfG"
                     /locus_tag="MOX77_002759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase NrfEFG subunit NrfG"
                     /protein_id="HCA3358240.1"
                     /translation="MSQSEHSTVPLRPMPVKRLTAAAVLMVAVCIGGYMLTPKWQAVR
                     SEQQRLADPLRDFTNPQTPEAQLSRLQEKIRANPQDSEQWARLGEYYLYRNAYDNALL
                     AYRQALRLRGDNAQLFAALATVLYYQSGQHMTPATREMINKALALDATEVTAQMLLAA
                     DAFMQADYAQAVSLWQTLLDANSPRVNRAQLVEAINLAKLLQNRQK"
     gene            2466..3776
                     /gene="gltP"
                     /locus_tag="MOX77_002760"
     CDS             2466..3776
                     /gene="gltP"
                     /locus_tag="MOX77_002760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate/aspartate:proton symporter GltP"
                     /protein_id="HCA3358241.1"
                     /translation="MKNLKVSLAWQILLAMVLGILLGSYLHYHSDSREWLIANLLSPA
                     GDIFIHLIKMIVVPIVISTLIVGIAGVGDAKQLGRIGAKTILYFELITTVAIILGITL
                     ANVFQPGSGIDMSQLATVDISKYQNTTAEVQSHAHGLMGTILSLVPTNIIASMAKGDM
                     LPIIFFSVLFGLGLSSLPATHREPLVTVFRSISETMFKVTHMVMRYAPVGVFVLIAVT
                     VANFGFASLWPLAKLVLLVHFAIIFFALVVLGIVARLCGLSIWILIRILKDELILAYS
                     TASSESVLPRIIEKMEAYGAPASITSFVVPTGYSFNLDGSTLYQSIAAIFIAQLYGID
                     LSLWQEIVLVLTLMVTSKGIAGVPGVSFVVLLATLGSVGIPLEGLAFIAGVDRILDMA
                     RTALNVVGNALAVLVIAKWEHKFDRKKALAYERDVLGKFDKTAQ"
     gene            complement(3934..4623)
                     /locus_tag="MOX77_002761"
     CDS             complement(3934..4623)
                     /locus_tag="MOX77_002761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HCA3358242.1"
                     /translation="MKPLIALMLFMTFFAHAADPEPGSQYLQAAEAGDRRAQYFLADS
                     WLSYGDLNKAEYWAQKAADNGDADACALLAQIKITNPVSLDYPDAKKLAEKAANAGSK
                     AGEITLARILVNTQAGRPDYPKAISLLQKASEDLDNDSAVDAQMLLGLIYANGVGIAA
                     DDEKAAWYFKRSSAISRTGYSEYWAGMMFLNGEPGFIEKNKQKALHWLNLSCLEGFDT
                     GCEEFETLTNG"
     gene            complement(4800..6947)
                     /locus_tag="MOX77_002762"
     CDS             complement(4800..6947)
                     /locus_tag="MOX77_002762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:complement(6528..6530),aa:Sec)
                     /transl_table=11
                     /product="formate dehydrogenase N subunit alpha,
                     selenocysteine-containing"
                     /protein_id="HCA3358243.1"
                     /translation="MKKVVTVCPYCASGCKINLVVDNGKIVRAEAAQGKTNQGTLCLK
                     GYYGWDFINDTQILTPRLKTPMIRRQRGGKLESVSWDEALNYVAERLSAIKAKYGPDA
                     IQTTGSSRGTGNETNYVMQKFARAVIGTNNVDCCARVUHGPSVAGLHQSVGNGAMSNA
                     INEIDNTDLVFVFGYNPADSHPIVANHVINAKRNGAKIIVCDPRKIETARIADMHIAL
                     KNGSNIALLNAMGHVIIEENLYDKAFVASRTEGFEEYSKIVEGYTPESVEEITGVSAQ
                     EIRQAARMYASAKSAAILWGMGVTQFYQGVETVRSLTSLAMLTGNLGKPSAGVNPVRG
                     QNNVQGACDMGALPDTYPGYQYVKFPENREKFAKAWGVESLPAHTGYRISELPHRAAH
                     GEVRAAYIMGEDPLQTDAELSAVRKAFEDLELVIVQGIFMTKTASAADVILPSTSWGE
                     HEGVFSAADRGFQRFFKAVEPKWDLKTDWQIISEIATRMGYPMHYNNTQEIWDELRHL
                     CPDFYGATYEKMGELGYIQWPCRDTSDADQGTSYLFKEKFDTPNGLAQFFTCDWVAPI
                     DKLTEEYPMVLSTVREVGHYSCRSMTGNCAALAALADEPGYAQINTADAARLGIEDEA
                     LVWVHSRKGKIITRAQVSDRPNKGAIYMTYQWWIGACNELVTENLSPITKTPEYKYCA
                     VRVEPIADQRAAEQYVIDEYNKLKTRLRESAMG"
     gene            complement(7286..8194)
                     /gene="lpxO"
                     /locus_tag="MOX77_002763"
     CDS             complement(7286..8194)
                     /gene="lpxO"
                     /locus_tag="MOX77_002763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A hydroxylase LpxO"
                     /protein_id="HCA3358244.1"
                     /translation="MFAAIIIGIFIISVIYAHSRGVEKQKLSRQLFDHSTFMAPINMF
                     MTRFSTLPAKQPYFDTTAFPELQKLTENWQVIREEALRLQHHIKAAQANNDAGFNTFF
                     KRGWKRFYLKWYSDAHPSAETLCPITTKLVNSIPSIKAAMFAELPPGAYLGKHRDPYA
                     GSVRYHLGLSTPNDDRCFIEVDRQRHSWRDGEAVIFDETYVHWAENKTEQTRIILFCD
                     IERPMKWRWAQSVNHWVGASLMSAASSPNDENDRTGAINRIFKYVHAARDAGQRLKKK
                     NRTLYYALKYLVIAAIFAAIILFSLL"
     gene            complement(8452..8886)
                     /gene="phnO"
                     /locus_tag="MOX77_002764"
     CDS             complement(8452..8886)
                     /gene="phnO"
                     /locus_tag="MOX77_002764"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoalkylphosphonate N-acetyltransferase"
                     /protein_id="HCA3358245.1"
                     /translation="MPVCELRHATTEDTDSVYALICELLKNELDYQAFRDGFAANLLD
                     PNLHYRLALRNGEVVGMISLHMQFHLHHANWIGEIQELVVLPQMRGQKVGSQLLAWAE
                     EEARQAGAELTELSTNIKRRDAHRFYLREGYKQSHFRFTKAL"
     gene            complement(9038..9481)
                     /gene="yjdN"
                     /locus_tag="MOX77_002765"
     CDS             complement(9038..9481)
                     /gene="yjdN"
                     /locus_tag="MOX77_002765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family metalloprotein YjdN"
                     /protein_id="HCA3358246.1"
                     /translation="MPLSPYLSFAGNCADAIAYYQQTLGAELLYKLSFGEMPPSAADN
                     EEGCPSGMRFPDTAIAHANMRIAGSDIMMSDASASGTAHYSGFTLVLDTQDVAEGKRW
                     FDNLAAQGQIEMDWQETFWAQGFGKVSDRFGVPWMINVVKHQPAT"
     gene            complement(9601..9936)
                     /locus_tag="MOX77_002766"
     CDS             complement(9601..9936)
                     /locus_tag="MOX77_002766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phnA family protein"
                     /protein_id="HCA3358247.1"
                     /translation="MSLPHCPQCNSEYTYEDNGMFICPECAHEWNDAEPAQESDELIV
                     KDANGNLLADGDSVTIVKDLKVKGSSSMLKIGTKVKNIRLVEGDHNIDCKIDGFGPMK
                     LKSEFVKKN"
     gene            10404..11906
                     /gene="proP"
                     /locus_tag="MOX77_002767"
     CDS             10404..11906
                     /gene="proP"
                     /locus_tag="MOX77_002767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine/L-proline transporter ProP"
                     /protein_id="HCA3358248.1"
                     /translation="MLKRKKIKPITLGDVTIIDDGKLRKAITAASLGNAMEWFDFGVY
                     GFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAIT
                     IVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRK
                     RGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEENFLEWGWRIPFFIALPLGIIGLYLR
                     HALEETPAFQQHVDKLEQGDREGLQDGPKVSFKEIATKHWRSLLSCIGLVIATNVTYY
                     MLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVIMGSIA
                     LFALAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAA
                     FNISVLIAGLTPTLAAWLVESSQDLMIPAYYLMVIAVIGLITGISMKETANRPLKGAT
                     PAASDIQEAKEILGEHYDNIEQKIDDIDQEIAELQVKRSRLVQQHPRIDE"
     gene            11976..12065
                     /gene="pmrR"
                     /locus_tag="MOX77_002768"
     CDS             11976..12065
                     /gene="pmrR"
                     /locus_tag="MOX77_002768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000844399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LpxT activity modulator PmrR"
                     /protein_id="HCA3358249.1"
                     /translation="MKSYIYKSLTTLCSVLIVSSFIYVWVTTY"
     gene            complement(12073..13143)
                     /gene="pmrB"
                     /locus_tag="MOX77_002769"
     CDS             complement(12073..13143)
                     /gene="pmrB"
                     /locus_tag="MOX77_002769"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     PmrB"
                     /protein_id="HCA3358250.1"
                     /translation="MRFQRRAMTLRQRLTLTIGLILLVFQLISTFWLWHESTEQIQLF
                     EQALRDNRNNDRHIMHEIREAVASLIVPSVFMVSLTLLVCYQAVRRITRPLAELQKEL
                     EARTADNLTPIAIHSSTLEIESVVSAINQLVTRLTTTLDNERLFTADVAHELRTPLSG
                     VRLHLELLSKTHNVDVAPLIARLDQMMDSVSQLLQLARVGQSFSSGNYQEVKLLEDVI
                     LPSYDELNTMLETRQQTLLLPESAADVVVRGDATLLRMLLRNLVENAHRYSPEGTHIT
                     IHISADPDAIMAVEDEGPGIDESKCGKLSEAFVRMDSRYGGIGLGLSIVSRITQLHQG
                     QFFLQNRTERTGTRAWVLLKKA"
     gene            complement(13153..13821)
                     /gene="pmrA"
                     /locus_tag="MOX77_002770"
     CDS             complement(13153..13821)
                     /gene="pmrA"
                     /locus_tag="MOX77_002770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator PmrA"
                     /protein_id="HCA3358251.1"
                     /translation="MKILIVEDDTLLLQGLILAAQTEGYACDGVSTARAAEHSLESGH
                     YSLMVLDLGLPDEDGLHFLTRIRQKKYTLPVLILTARDTLNDRISGLDVGADDYLVKP
                     FALEELHARIRALLRRHNNQGESELTVGNLTLNIGRHQAWRDGQELTLTPKEYALLSR
                     LMLKAGSPVHREILYNDIYNWDNEPSTNTLEVHIHNLRDKVGKSRIRTVRRFGYMLVA
                     TEES"
     gene            complement(13818..15461)
                     /gene="eptA"
                     /locus_tag="MOX77_002771"
     CDS             complement(13818..15461)
                     /gene="eptA"
                     /locus_tag="MOX77_002771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase EptA"
                     /protein_id="HCA3358252.1"
                     /translation="MLKRFLKRPVLGQIAWLLLFSFYIAVCLNIAFYKQVLQDLPLNS
                     LRNVLVFISMPVVAFSVVNSVLTLASFIWLNRLLACIFILVGAAAQYFILTYGIIIDR
                     SMIANMMDTTPAETFALMTPQMVLTLGLSGVLAAVIAFWVKIRPATPRLRSGLYRLAS
                     VLISILLVILVAAFFYKDYASLFRNNKQLIKALSPSNSIVASWSWYSHQRLANLPLVR
                     IGEDAHRNPLMLKGDRKNLTILIVGETSRGDDFSLGGYPRDTNPRLAKDDVIYFPHTT
                     SCGTATAISVPCMFSDMPRKHYDEELAHHQEGLLDIIQRAGINVLWNDNDGGCKGACD
                     RVPHQNVTELNLPGQCIDGECYDEVLFHGLEDYIDHLKGDGVIVLHTIGSHGPTYYNR
                     YPPQFKKFTPTCDTNEIQNCSQQQLINTYDNTVLYVDYIVDKAINLLKSHQDKFTTSL
                     VYLSDHGESLGENGVYLHGLPYSIAPDTQKHVPMLIWLSKDYQQRYQVDQACLQKRAS
                     TLDYSQDNLFSTMLGLTGVQTTYYQAADDILQPCRRLSE"
     gene            complement(15595..>16034)
                     /locus_tag="MOX77_002772"
     CDS             complement(15595..>16034)
                     /locus_tag="MOX77_002772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HCA3358253.1"
                     /translation="AKAAADDGLFPPIFARVNKAGTPVAGLLIVGVLMTIFQFSSMSP
                     NAAKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPLYLLITFVAFVYCIWAV
                     IGSGAKEVMWSFVTLMVITALYALNYNRIHKNPYPLDAPVKQD"
BASE COUNT         3619 a         4121 c         4347 g         3947 t
ORIGIN      
        1 ttctgggacc cggtggaaaa tgcctcattg ttgccgtggc ttgccgccag cgcgttgctg
       61 cacagtctgt atgtcagccg ccagcgcggg agcttccgcc actggtcgtt gctgctggcg
      121 atactgacgc tgatcctctc gttgctggga acgctgattg tgcgttccgg cattctgctc
      181 tccgtccatg cttttgcgtt agataatgtg cgcgcggtgc cgctgtttat cctttttgcc
      241 gcgttaagtc tggcatcgct tgctctgtac ggctggcggg cacgggagcc gtatccggcg
      301 acgcgtttgg gcggcggaaa gtgcgaaacg ctcattctgg cgacgctgct gctctttagc
      361 gccgtcttgt tgatcgtgct ggtcgggacg ctctacccca tgatttatgg tttgatgggc
      421 tggggaaggc tttcggtggg cgcgccctat tttaatcgcg tcacgctgcc gtttggcctg
      481 ctgatgctgg tggttatcgt gcttgcgaca atcagaagcc gcaaagtctc tgtgcatcgt
      541 cagcttccgg cgttgctggc gcatacgggc gtatttatct tcgccgccgg gatcatggtt
      601 tccagcggca gtcggcatga aatcagcctt aacctcagcc cggggcagca ggtggtactg
      661 gcgggctata cctttcgttt cgagcgtctg gatctggaag ccaaaggcaa ctacaccagt
      721 gaaaaagcgc ggatcacgtt gtggcggaat gaaaaacgca ttggcagcct gcagcctgaa
      781 aggcgcttct atgccgcgcg tcgtcaacag atgatggagc cggggattca ctggaacctg
      841 ctacatgact ggtacgcggt gatgggcgaa aaaaccggag cggaccgtta cgccatgcgc
      901 ttatacgtgc agaccggcgt gcgctggatc tggggagggg gattgttgat ggtgtgtggc
      961 gcgctgctga gcggatggcg ggggaggaag cgtgatgcgt aaattactca cagcgttgcc
     1021 ggatggcggc gtaagcgcct tatccggcct acaggatgcg caaaccgtag gccggattag
     1081 cgtagcgcca tccggcagaa agtttttact cttaacgatc gtcctgtttt taatcacatt
     1141 cgccacccac gcccaggtgg tggatacctg gcgctttgac aatccacaac agcaggaaaa
     1201 agcgctgtct attgccggtc aactgcgctg tccgcagtgt cagaaccaga atttgctgga
     1261 atccaatgcg cccgtggcgg tcagtatgcg ccatcaggtt tacagcatgg tggccgaagg
     1321 taaaagcgaa gcggaaatca ccgcctggat gaccgaccgt tatggtgatt tcgtgcgcta
     1381 caacccgccg ttgaatgagc aaacgctgct gttgtgggcg ctgccgtgcc tgctgttatt
     1441 gttggtgggc gtggtggtct ggcgggtgag aaagcgtcag cacgcagaag agggggaaca
     1501 atgagccagt ctgagcactc cactgtgccg ttacgtccca tgcccgtaaa gcgtctgacg
     1561 gctgcggcgg tgttgatggt ggctgtctgt atcggcggct atatgttgac gccgaaatgg
     1621 caggctgtgc gtagcgagca acagcgtctg gccgatccgc tacgtgactt tacgaacccg
     1681 caaacgccag aggcgcagct ttccaggctg caagaaaaaa tccgcgccaa tccgcaggat
     1741 agcgagcaat gggcgcggct gggcgagtat tatctctatc gcaatgcgta tgacaatgcg
     1801 ctgctggcat atcgtcaggc gttgcgtctg cgaggcgata acgcgcagct tttcgccgcg
     1861 ctggcaacgg tgctgtatta ccagtccggg caacatatga cgcctgcgac gcgtgaaatg
     1921 attaataaag cgttagcgct ggatgcgaca gaagtgaccg cgcagatgct gctggcggcg
     1981 gatgcgttta tgcaggcgga ttatgcgcaa gccgtgtcgc tgtggcaaac cttactggat
     2041 gcaaactcgc cgcgagtgaa ccgcgcgcag ctggtagagg ccattaattt ggctaaattg
     2101 ttacaaaatc ggcagaaata attttttctt ttttgtgact tttgtcatgt gtgctgttta
     2161 aaaaaacggc gaatgcgcca caggtaaaaa ttaattacct cagaatatta ttcgattttg
     2221 acgaagtaaa aaactttcca taacaaatag ttattcatca ttaacaccat aaactcgcgt
     2281 tattatgcat aaaaacagcc aaaagccctg ttatgaaagg gttgcgcaag acgctatgca
     2341 aatgatactg attatgcgcg ttaaaaaact ctacaaacca acgcaacaca aatcataccc
     2401 ttccagtatg tattgctctc atgctttcgg cggagagcaa cgcttcatcg aggaagtctg
     2461 ttgttatgaa aaatttgaaa gtcagcctgg cctggcaaat tttgctggct atggtgctgg
     2521 gcattctgct gggcagctat ctgcattatc acagtgacag ccgtgaatgg ctgattgcca
     2581 atctgctgtc gcctgctggc gatatcttta tccatctgat taaaatgatc gtcgtgccaa
     2641 tcgtgatctc gactctgatt gtcggcatcg ccggcgttgg cgatgcaaaa cagctaggcc
     2701 gtatcggcgc caaaaccatt ctctattttg aactgatcac cacggtggcg attatcctcg
     2761 gcattacgct ggcgaatgtc tttcagccag gctcaggcat tgatatgtcg caactggcga
     2821 ccgtcgatat ttcgaaatac cagaacacca cggcggaagt acaaagtcat gcacatgggc
     2881 tgatggggac gatactgtcg ctggtgccga ccaatatcat cgcatcgatg gccaaagggg
     2941 atatgctgcc aattatcttt ttctcggtcc tgtttgggct ggggttgtca tccctgccgg
     3001 caacgcaccg cgaaccgctg gtgacggtat ttcgttccat ctctgaaacc atgtttaaag
     3061 tcacccatat ggtgatgcgc tatgcgccag tgggcgtttt tgtgctgatc gccgtcacgg
     3121 tagcgaattt tggtttcgcg tcgctgtggc cgctggcgaa actggtgctg ctggtacact
     3181 ttgccattat cttctttgcg ctggtggtgc tgggcatcgt ggcgcgcctg tgcgggttaa
     3241 gtatctggat tctgattcgc attctgaaag atgaattgat tctggcgtac tcgaccgcca
     3301 gctccgagag cgtgctaccg cgcattatcg agaagatgga agcttacggc gcgccagcct
     3361 ctatcaccag tttcgtggtg ccgaccggtt actcatttaa cctcgacggc tccacgttat
     3421 accagagcat cgccgccatt tttatcgcgc agctatacgg tatcgacctg tcgctgtggc
     3481 aggaaattgt actggtgctg acgctgatgg tgacgtcgaa agggattgcc ggcgtgcctg
     3541 gcgtttcctt cgtggtgtta ctggcgacgc tgggcagcgt gggcattccg ctggaagggc
     3601 tggcgtttat cgccggtgtc gaccgtatcc tcgacatggc gcgtactgcg ctaaatgtgg
     3661 tggggaatgc gctggcggtg ctggttatcg ccaagtggga acacaagttt gaccgtaaaa
     3721 aagcgctggc ctatgagcgc gacgtactgg gcaaatttga taagaccgcc caataacgga
     3781 ttgccggatg gcgctttgct tatccggcct acagagaaag agaatgtagg ccggataagg
     3841 cgttcacgcc gccatccgac aaccggctcc gggttgcctg atggcgctac gcttatcagg
     3901 cctacaacga ctacgttcat caggcaataa acatcagcca tttgttagcg tttcgaactc
     3961 ttcgcaaccg gtatcaaacc cttccagaca gcttagattc aaccaatgca acgccttctg
     4021 cttgttcttt tcaataaagc ccggttcacc gtttaaaaac atcattcccg cccagtattc
     4081 tgaatagccg gtacgggaaa tagcggaact gcgtttgaaa taccaggcgg ctttttcatc
     4141 atcggcggca atgcccacgc cgttggcgta aatcaggcca agcaacattt gcgcatccac
     4201 cgcggagtcg ttatccagat cttcagaggc cttttgcagc agcgagatgg cttttgggta
     4261 gtccggacgc ccggcctggg tgttgaccag gatccgcgcc agcgtaattt ctcccgcttt
     4321 actgcccgcg ttagccgcct tttcagccag ctttttcgcg tcgggataat ccaggcttac
     4381 cggattagtg attttgattt gcgccagtag cgcgcaggcg tcggcgtcgc cattgtcggc
     4441 ggctttttgc gcccagtatt cagctttgtt caaatcgcca tagctcaacc aactgtcggc
     4501 cagaaaatat tgcgcgcgtc tgtcacctgc ctctgctgcc tgcaaatact ggctacccgg
     4561 ctcaggatct gcggcatggg caaagaatgt cataaacaac atcaatgcaa taagtggttt
     4621 cattttgaat tttatttagg gtacggaaaa gacagtataa agagatcgta tggataaaaa
     4681 aacagcctcc gggcggaggc tgttataggg aaaatgcctg atggcgatgc taatgcatat
     4741 tatcaggcct acagtagacg caggccgaat aaagcattct gatgccgcca tccggcagat
     4801 caacccattg cgctttcgcg caggcgggtt ttcagcttgt tgtactcatc aatcacatac
     4861 tgctcggcgg ctcgctgatc ggcgatcggc tcaacgcgta cggcgcagta tttgtactcc
     4921 ggcgttttgg taatcgggct gaggttttca gtcaccagct cgttacaggc gccaatccac
     4981 cactggtagg tcatgtaaat cgcccctttg ttcgggcgat cgctgacctg cgcgcgggtg
     5041 atgattttgc ctttacgcga atgaacccac accagcgctt catcttcaat gcccagacgc
     5101 gcggcgtcgg cggtattgat ttgcgcatag cccggttcat cggccagcgc ggccagcgcc
     5161 gcacagttac cggtcattga gcggcaggag tagtggccga cttcgcgcac cgtcgacagt
     5221 accatcgggt actcttcggt gagtttatcg ataggcgcta cccagtcgca ggtgaagaac
     5281 tgcgccagac cgttgggggt atcgaacttc tctttaaaga ggtacgaggt tccctgatcg
     5341 gcatccgacg tgtcgcggca tggccactgg atatagccca gttcgcccat tttctcgtaa
     5401 gtggcgccgt agaaatccgg gcacagatga cgcaactcat cccagatctc ctgggtgttg
     5461 ttgtagtgca tcggatagcc catccgggtg gcgatttcac tgataatctg ccagtcggtt
     5521 ttcaggtccc acttcggctc aacggcttta aagaagcgct ggaagccacg gtcagccgca
     5581 gagaagacgc cttcatgctc gccccaggag gtggagggta aaatcacatc cgccgccgac
     5641 gcggttttgg tcatgaagat gccctgcacg atgaccagtt ccaggtcctc aaacgcttta
     5701 cgtaccgcag agagctccgc atcggtttgc agcggatctt cacccataat gtacgccgcg
     5761 cgcacttcgc catgcgccgc acggtgcggc agctcgctga tgcgatagcc ggtatgtgca
     5821 ggcagacttt ctacgcccca ggctttagcg aacttctcgc ggttttccgg gaatttaacg
     5881 tactggtagc ccggataagt atccggcagc gcgcccatat cgcacgcgcc ctgaacgttg
     5941 ttctggccgc gaaccgggtt aacgcccgcg cttggcttgc cgaggttacc ggtcagcatc
     6001 gcgaggctgg tcagtgaacg cacggtttcc acaccctgat agaactgggt gacgcccata
     6061 ccccacaaga tcgccgcgct tttcgcgctg gcatacatcc gcgccgcctg acgaatctcc
     6121 tgtgcgctca cgccagtgat ctcttcaacg gactccggcg tatagccttc gacaatctta
     6181 ctgtactctt caaaaccttc ggtacggctg gcgacaaacg ctttgtcgta caggttttct
     6241 tcaataatga catgtcccat ggcgttgagc agcgcgatat tcgagccgtt tttcaacgcg
     6301 atatgcatgt cagcgatgcg cgcagtttca attttgcgcg gatcgcagac gataattttc
     6361 gccccgttgc gtttagcgtt aatcacatga ttcgccacga tagggtggga atccgccggg
     6421 ttatacccga agacgaacac taaatcagtg ttatcaattt cgttaatcgc attactcatt
     6481 gcgccgttac cgaccgattg gtgcagacct gcaaccgatg ggccgtgtca gacgcgagcg
     6541 cagcagtcaa cgttattggt accaataacg gcgcgtgcga atttttgcat tacatagttg
     6601 gtttcatttc cggtaccgcg agaggagccg gttgtctgga ttgcatccgg accgtacttc
     6661 gctttgatgg cgctcaaacg ttcagcgacg taattgagcg cttcatccca ggaaacagat
     6721 tccagtttgc cgccacgctg gcgacggatc attggggttt tcagacgcgg ggtcaggatc
     6781 tgggtatcat taataaaatc ccagccatag tagcccttca gacacagggt accctggttg
     6841 gttttcccct gcgccgcctc agcccggacg attttgccgt tatcgaccac cagattgatt
     6901 ttgcaacctg atgcgcaata cgggcaaacc gtgacgactt ttttcatcgg tttcgctcca
     6961 gttaatcaaa tcgcgcatac gcgctgtcgc cctcagtatg catgttttat gccacttttt
     7021 tagtatgggc tttccctgat attacgggcg aattttgctc aaaaccctga cgaaaaacag
     7081 gctatcgtca gttttgacgt gtcgaaagaa aatgccgcat gacatttatt atggggagaa
     7141 acgcggagcg caggccagat aaggcggaac gctctgcctg aagtggatat tatccggatg
     7201 gatagactca aggtcaggga acgctttgag actaacgcca ggatagaaca ggccgcggca
     7261 ggcagtttca taccgtggcc cggcttcaga ggaggctgaa aaggattatc gcggcaaaaa
     7321 tagcggcaat aacgagatat ttcagcgcgt aatagagagt acggtttttc tttttcagcc
     7381 gttgcccggc atcgcgtgct gcgtgaacgt atttaaagat gcgattaatc gcaccggtgc
     7441 gatcgttctc gtcgtttggc gaactggcgg cggacatcaa cgatgcgccg acccagtggt
     7501 ttacgctctg cgcccagcgc catttcattg ggcgctcaat atcgcaaaag aggataatac
     7561 gcgtctgctc agttttattt tccgcccaat gaacgtaggt ttcgtcgaag atgacggctt
     7621 cgccgtcgcg ccagctatgg cgctgtcgat caacttcaat aaaacagcgg tcatcattcg
     7681 gtgtgcttaa tccaagatgg taacgtactg aaccggcata ggggtcgcga tgttttccca
     7741 gataggcccc gggaggcaac tcggcgaaca tcgccgcttt gatagagggg atgctgttga
     7801 ccagctttgt cgttatcggg cataacgttt ctgccgacgg gtgggcatcg gaataccatt
     7861 taagataaaa ccgtttccag ccgcgcttga aaaaggtgtt gaatccggcg tcgttattgg
     7921 cctgcgcggc ttttatgtga tgctgaagcc gtagcgcctc ttcacgaatc acctgccagt
     7981 tttccgtcag cttctgcagc tctggaaatg ccgtggtatc aaagtacggc tgctttgccg
     8041 gtaacgttga gaagcgagtc atgaacatat tgatcggcgc cataaacgtc gagtggtcaa
     8101 agagctgacg ggaaagtttt tgtttttcca ccccgcgtga atgcgcataa atgacgctga
     8161 taataaaaat accgataatg attgctgcga acataacgtc actgtccttc taagaaaacc
     8221 tcatcccggg attttcaggc aaccctcccg gtgatgccaa agagaaaagt gtagttcgtt
     8281 gacaataaat ttacatttct acaacttaaa agggccattt ttgttaaaga agcgagtcag
     8341 cccgtttaac ctttatccag gcttgtcgac agtagaattg agatgactcc gctacttcac
     8401 ccggtgacgg ctgattacgt tatgccttat ctcctgatga cggttgccag atcacaatgc
     8461 tttcgtaaac cggaaatgac tttgcttgta accttcgcga agataaaaac ggtgtgcatc
     8521 gcggcgttta atatttgtgg aaagctccgt tagctccgca cccgcctgac gtgcttcttc
     8581 ttctgcccag gccagaagct gactgccaac tttttgtccc cgcatctgcg gtaataccac
     8641 cagctcctga atttcgccaa tccagttggc atgatggaga tgaaactgca tatgcaggct
     8701 gatcatgccg accacctctc cgttgcgtag cgctaaacga taatgaaggt tggggtccag
     8761 taaattagcg gcgaacccat ccctgaaagc ctgataatca agctcatttt taagtaactc
     8821 acagataagc gcgtaaacag aatcggtatc ctctgttgtc gcgtggcgta attcacagac
     8881 tggcataatg tcctcccgac gcttcatcag gatcaaccat ctttcgccag actgtagcaa
     8941 actaccgtca ttatttattc tatggcagct aaacggcgga taacgtgcag ccaaagatca
     9001 ctctgatggc aagggggaag gcgagcctcc cggggagtta ggtggcaggc tgatgtttaa
     9061 ccacgttaat catccacggc acaccgaaac gatcgctgac cttgccgaaa ccctgcgccc
     9121 agaaagtctc ctgccagtcc atttcgattt gcccttgtgc ggcaaggtta tcaaaccagc
     9181 gcttcccttc tgctacatcc tgggtatcaa gcaccagcgt aaagccggaa taatgcgccg
     9241 ttcccgacgc gctggcatca ctcatcatga tatcgctgcc cgcaatgcgc atgttggcgt
     9301 gggcgatagc agtatcggga aagcgcattc ctgacgggca gccctcttca ttatccgccg
     9361 ccgagggggg catttcaccg aagctgagtt tataaagcag ttctgcgcct aacgtttgtt
     9421 gataatacgc gatggcgtcg gcacagttgc cggcaaaaga gagataggga cttaacggca
     9481 tgatggttac ctcaggtaag agatgctcgt taagtgtagt tcgaaattgg cacaatattg
     9541 tcggtggcag ggccgctcag gcccggtaag caaggcgcta ccgggcaatg atacggtaaa
     9601 tcagttcttt ttcacgaact cggatttcag tttcatcggg ccaaaaccat cgattttgca
     9661 gtcgatgtta tggtcgcctt caaccagacg aatgttcttc actttggtgc cgattttcag
     9721 catggaagag ctgcctttta ctttcagatc tttcacgatg gtgacgctat cgccgtccgc
     9781 cagcaggttg ccgttggcgt ctttgacaat cagctcatcg ctctcctgag cgggttccgc
     9841 atcgttccat tcgtgagcgc attccgggca gatgaacatg ccgttatctt cgtaggtata
     9901 ttcggagtta cattgcgggc agtggggtaa tgacatgttg gtatcctcaa aaagtcagcg
     9961 ggggcaaacg cgcccaaaaa tggcagatcg ccgaaaaagg ccgcaattat acacaaaatc
    10021 cttagtgttg tcgggactat tgccgctttt ataaaagggg ctgcgccacg ccagtcagca
    10081 atggtttaca ctcgaataac cgctttttta ctgccactac agcgcattag ggcgtccttg
    10141 tttacacctt ttgaccaaat tgacatatat gtgtgaagtt gatcacatat ttaaaccctg
    10201 ttagggtaaa aaggtcatta actgcccatt caggcgtcaa caggttcggt tgtacagtcc
    10261 gtaaccggac agtgtaagta aacctgctac gcttgtatga gggatagcgt tcgcgcccct
    10321 ccctccgctc gacggcgacg ctggcgcggt atgccagtgc ccgccgtata tagcgctaca
    10381 gggcttagcc tatgaggaca gctatgctga aaaggaaaaa aataaaaccg attacactgg
    10441 gcgatgtgac catcattgat gatggtaaac ttcgcaaagc gattaccgcc gcgtcgctgg
    10501 gcaacgcgat ggagtggttt gattttggtg tttatggatt tgttgcctac gcgttgggta
    10561 aagtcttttt ccccggcgcc gatcccagcg tccagatgat tgccgcgctg gccacgtttt
    10621 ccgttccctt cctgattcgt ccgctcggcg ggttattctt tggtatgctc ggcgataaat
    10681 acgggcgcca gaagatcctg gcgatcacga ttgtgattat gtcgatcagt accttctgta
    10741 tcgggttaat cccctcttac gcgacgatcg gtatctgggc gccaatactg ttgttgctgt
    10801 gtaaaatggc gcagggcttc tcggttggcg gggaatatac cggcgcgtcg atctttgtcg
    10861 cggaatattc gccggatcgt aaacgcggat ttatgggaag ctggctggat tttggttcca
    10921 tcgccgggtt cgtgctgggc gcgggcgtgg tggtcttaat ctcgacgatt gtcggcgagg
    10981 agaatttcct tgagtggggc tggcgtattc cgttctttat cgccctgcca ttggggatta
    11041 ttggtctcta cttacgccat gcgctggagg agacgccagc gtttcagcag cacgtggata
    11101 aactggagca gggcgaccgc gaagggttgc aggatgggcc gaaagtctcc tttaaagaga
    11161 ttgccaccaa acactggcgt agcctgttgt catgtatcgg tctggtgatt gccaccaacg
    11221 tgacctacta catgctgctc acctacatgc cgagctacct gtcgcataac ctgcactatt
    11281 ctgaagatca cggcgtgttg attatcatcg ccattatgat cgggatgctg tttgtgcagc
    11341 cggtgatggg gctgctgagc gaccgtttcg gtcgacgtcc atttgtgatt atgggcagca
    11401 ttgcgctgtt cgcgctggcg atcccggcct tcatcctgat taacagtaac gttattggcc
    11461 tgatttttgc cggtttgttg atgctggcgg tgattctgaa ctgctttacc ggggtgatgg
    11521 cctcgacatt gccggcgatg tttccgacgc atattcgtta cagcgcgctg gcggcggctt
    11581 ttaatatctc tgtattgatt gccggtctga cgccaacgct ggcggcctgg ctggtggaaa
    11641 gctcgcagga tctgatgata ccggcgtatt atttgatggt catcgcggtg ataggcttga
    11701 ttaccggtat ttccatgaaa gagacggcca atcgtccgtt aaaaggcgca acgccagcgg
    11761 cgtcggacat ccaggaagcg aaggaaattc tgggcgagca ttacgataat attgagcaga
    11821 aaatcgacga catcgatcag gaaattgcgg agctgcaggt caaacgttcg cgtctggtac
    11881 agcaacatcc gcgtatcgat gaataaattt cgcgcttaag gttcgcttaa tctctcgcgg
    11941 gcatactctc ctccatacct ttggaggaga gcgtcatgaa aagctatatt tataaaagtt
    12001 tgacgaccct gtgtagtgtg ctgattgtca gcagttttat ctatgtgtgg gtcacgacgt
    12061 attaaacgcc tgttatgcct ttttcaacag cacccaggca cgggtgcctg ttctttccgt
    12121 acggttttgc aggaaaaact gtccctgatg tagctgggtg atgcggctga cgatactcag
    12181 ccccaggcca attccgccat aacggctgtc catccgcacg aacgcttcgc ttagcttccc
    12241 gcatttgctt tcatcaatac ccggcccctc gtcttcgacc gccataatag cgtcggggtc
    12301 ggcgctaatg tggatagtga tatgggttcc ttcagggcta tagcgatgcg cgttttccac
    12361 cagatttcgc agcagcatac gcagtaacgt cgcgtcaccg cgcaccacca cgtccgccgc
    12421 gctttccggc agcaacagag tttgctggcg cgtttccagc atggtgttca gctcatcgta
    12481 ggaggggagg atcacatctt ccagcagttt tacttcctga taattcccgg aagagaatga
    12541 ctggcccacg cgcgccagtt gcagaagctg ggagacgcta tccatcatct ggtcaagacg
    12601 ggcgataagc ggcgcgacat caacattgtg ggtttttgac aataattcca gatgcaaacg
    12661 cacccccgac agcggcgtgc gtagctcatg ggccacatcg gcggtaaaaa ggcgttcatt
    12721 gtcgagcgtg gtggtcaaac gcgtaaccag ttgattgatc gccgagacga cggactcaat
    12781 ctcaagcgtg gagctgtgaa tggcgatcgg cgtcagatta tccgccgtcc gcgcttccag
    12841 ctctttttgc agttcggcga gtgggcgggt aatacgccgt accgcctggt agcaaaccag
    12901 cagcgtcagg ctaaccataa atacgctggg gacgatcagg ctggcgaccg cctcgcgaat
    12961 ttcgtgcatg atatggcgat cgttgttgcg attatcccgc agcgcctgct cgaacagttg
    13021 gatttgctca gtgctttcat gccataacca gaaggtactg attagctgga acaccagcag
    13081 aataagacca attgtcagcg ttaaacgctg gcgaagggtc atcgctcttc gctgaaaacg
    13141 catcaggctc acttagcttt cctcagtggc aaccagcatg tagccaaacc tgcgaaccgt
    13201 gcgaatgcgc gacttgccga ctttgtcgcg caaattatgt atatgcactt ccagagtgtt
    13261 ggtcgagggt tcgttatccc agttgtagat atcgttataa agaatttccc ggtgcaccgg
    13321 actgcctgcc ttgagcatca atcgtgagag cagcgcgtac tccttaggcg tcagggtcag
    13381 ttcctgtcca tccctccatg cctgatggcg gcctatattg agcgtcagat tgccaaccgt
    13441 cagttcactt tcaccctggt tattatggcg gcgcagcaac gcgcggatgc gggcgtgcag
    13501 ctcctccagg gcgaagggtt ttaccagata atcatctgcg ccgacatcca gcccgctaat
    13561 gcggtcgttg agcgtatcgc gggcggtcag aatgagtacc ggcagggtgt attttttctg
    13621 tcggattcgc gtcaggaaat gcaggccatc ctcatcgggc agccctaaat ccagcaccat
    13681 cagactgtaa tgaccagact ccagactatg ctcggcggca cgcgctgtcg aaacgccatc
    13741 acacgcatag ccttcggttt gcgcggcgag tattaacccc tgtaataata gcgtgtcgtc
    13801 ttcaacaatc agtatcttca ttcgcttagt ctcctgcacg gttgcagaat atcatctgcg
    13861 gcctggtaat acgtcgtttg tacgccggtt aatcccagca tggttgagaa aagattgtcc
    13921 tgtgaataat ccagcgtgct cgcccgtttt tgcaggcagg cctgatccac ctgataacgc
    13981 tgttgataat ctttagaaag ccaaatgagc atcgggacat gtttttgcgt atccggcgca
    14041 atggaatacg gcaaaccgtg taaataaacg ccattttcac ccaatgattc gccgtgatcg
    14101 gaaagataga ccaggctggt ggtgaattta tcctggtgag atttcagcag gttaatggct
    14161 ttatctacaa tatagtccac gtacagcacg gtattatcat aggtgttgat caactgctgt
    14221 tgggaacagt tctgaatttc gttagtgtca caggttgggg taaatttttt aaactgcggt
    14281 ggataacggt tgtaataggt tgggccgtgg ctgccgatgg tatgcagtac aataacgcca
    14341 tcgcctttca aatggtcgat atagtcttcc agaccgtgaa ataacacttc atcgtagcac
    14401 tcgccgtcga tacattgtcc gggcaggttt agctcggtga cattttgatg cggaacgcga
    14461 tcgcatgcgc ctttacagcc gccgtcatta tcattccaca gtacgttaat ccccgcgcgc
    14521 tggataatat ccagtagccc ttcctggtga tgcgccagct cttcgtcata atgtttgcgc
    14581 ggcatatcag aaaacatgca gggaacggag atcgcggtcg ccgtaccgca agaggtggta
    14641 tgcgggaagt agatcacatc gtctttcgcc agccgcggat tggtgtcgcg cggatagccg
    14701 ccaagagaga aatcatcgcc gcgcgaggtt tcgccaacga tgagaatcgt caggtttttg
    14761 cgatcgcctt tcagcattaa tggattgcga tgggcatcct cgccaatgcg taccagcggc
    14821 aaattcgcca gccgttgatg cgaataccat gaccaactgg cgacaatact gttcgatggg
    14881 cttaacgctt tgatcaactg tttattattt cgaaatagcg aggcgtaatc tttatagaaa
    14941 aaggcggcga ccagaataac taataaaata gagatcagga cgctggccag gcggtaaagc
    15001 ccgctccgta agcgcggcgt cgccggacgg attttgaccc agaaggcaat cacggctgcc
    15061 agaacgccgc ttaatcccag cgtcagcacc atttgcggcg tcatcagagc aaaagtttcc
    15121 gcgggcgtgg tatccatcat attggcgatc atggagcgat cgatgatgat gccgtaagtc
    15181 aaaataaaat actgcgcggc agcgccgacc agaataaaaa tgcaggccag cagtcggttt
    15241 agccaaataa atgaggccag cgtcagcaca ctattgacca cgctaaacgc gacgaccggc
    15301 atggaaataa acaccagcac attgcgcagc gagtttaacg gtaggtcttg tagtacctgc
    15361 ttgtagaacg caatgttcag gcagacggca atataaaagg aaaaaagcag aagccaggcg
    15421 atttgcccaa gaacaggtct tttaagaaag cgctttaaca tgttgatgcg tccatcgatt
    15481 cggtgacgct aatcgtgaca aagtaaaatt aagtgaacct taagaactta atgttggtgg
    15541 tggccggata acctgcgcta tccggcctgt tgcgataaca ttaactacac gtggtcaatc
    15601 ttgtttaacc ggcgcatcca gcggatacgg gtttttgtga atgcggttgt agttcaacgc
    15661 atacagcgcg gtgatcacca tcaacgtgac gaacgaccac atcacttctt tggcgccgga
    15721 accgataacc gcccagatgc aatatacaaa cgcgacgaag gtaatcagca gatacagcgg
    15781 gcgcgcttta ccaaagtgac cgtggcccaa tagcaacagc gcggcacagg tgtaaagata
    15841 aggcaccagg gtgaagataa ccgacacgga ggagaccaga ccaaactctt tcgcggcgtt
    15901 cggcgacata ctgctgaact ggaagatagt catcagcacg ccgacgataa gcaacccagc
    15961 cactggcgta ccggctttat taacccgcgc gaagatcggc gggaagagac catcgtccgc
    16021 cgccgctttt gcgg
//
LOCUS       DAGWFR010000085        15839 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.087, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000085 DAGWFR010000000
VERSION     DAGWFR010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 15839)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15839)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15839
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.087"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..1239
                     /gene="creC"
                     /locus_tag="MOX77_002773"
     CDS             <1..1239
                     /gene="creC"
                     /locus_tag="MOX77_002773"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     CreC"
                     /protein_id="HCA3358254.1"
                     /translation="TDGQLAKAFAQLQHRPFRANISGIVKVRNEYHVYMTDAQGKVLF
                     DSENKAVGQDYSRWNDVWLTLRGQYGARSTAKDSADPNSTVMYVAAPIISDGRIIGVL
                     TVGKPNAAMAPVIKRSERRILWASAVLLGIALAIGAGMVWWINRSIARLTRYADSVTE
                     NRPLALPALGSSELRKLAQALESMRIKLEGKNDIEQYVYALTHELKSPLAAIRGAAEI
                     LREGPPADVVTRFTENILAQNTRMQALVETLLRQARLENRQDIPLAPVAVDELFTQLS
                     EARSIQLAAKKITLTLRPSSLVVVADAELLAQALGNVLDNAIDFTPENGVITLSAQPM
                     GEKAILQVTDSGCGIPDFALPRIFDRFYSLPRENGRKSSGLGLAFVSEAARLLNGEVT
                     LCNRPEGGVLASLTLHRHFT"
     gene            1297..2646
                     /gene="creD"
                     /locus_tag="MOX77_002774"
     CDS             1297..2646
                     /gene="creD"
                     /locus_tag="MOX77_002774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell envelope integrity protein CreD"
                     /protein_id="HCA3358255.1"
                     /translation="MLKSPLLWKMITLGGAMILLLIPLMMVRHTIVERADYRSHVEAA
                     IRQSTSGPQKVVGPLVAVPVTELYTVLEEEKEVQYKRSYLYFWLPESLLVEGNQNVEA
                     RKIGIYQGQVWHTDMAIKAEFDVARLHELNRPNITLGKPFIVVGVGDARGISAVKAPQ
                     VNGEMLTVEPGTGLPESREGIHIPLPDSQWATRNLTLAMSLNLSGTGSFSLVPVGRSS
                     EMTLTSNWPHPNFVGDFLPGKREISGSGFQAQWQTSRFATNLGEQFADAQKVDWDNLP
                     AFSVAVSTPADQYQLTDRATKYAILLITLTFMAFFVFETLTGQRLHPMQYLLVGLSLV
                     MFYLLLLALSEHIGFTPAWIAASLVGALMNSVYLQAVLKGWRNSVLFTLALLALDGVM
                     WGLLRSEDSSLLLGTGVLLLALGGVMFLTRHLDWYSLSCQQRKSLPPVKDDELRLWK"
     gene            complement(2704..3788)
                     /locus_tag="MOX77_002775"
                     /pseudo
     CDS             complement(2704..3788)
                     /locus_tag="MOX77_002775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463447.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrial protein"
     gene            complement(3829..4386)
                     /locus_tag="MOX77_002776"
     CDS             complement(3829..4386)
                     /locus_tag="MOX77_002776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein SthD"
                     /protein_id="HCA3358256.1"
                     /translation="MNMNRFAALAALLTFTGLASWSPSISAAYNTADAVDINVTGLIY
                     ADPCTVTVPDTISLGQYARADIAVAGGNTATIPFTIKMTNCPATTTKAAISFNGVPYP
                     DPNYASAIYANSAANPAQDLGLQLFNLDSKSLVNLANNVTYTVDINSNTHEANLPVAA
                     RMYTPYGKVTAGDFTSVVTITIAWQ"
     gene            complement(4404..6940)
                     /locus_tag="MOX77_002777"
                     /pseudo
     CDS             complement(4404..6940)
                     /locus_tag="MOX77_002777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463449.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial outer membrane usher protein"
     gene            complement(6986..7669)
                     /locus_tag="MOX77_002778"
     CDS             complement(6986..7669)
                     /locus_tag="MOX77_002778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial assembly chaperone"
                     /protein_id="HCA3358257.1"
                     /translation="MKHIKKSVLVVLLTSHVAHASIVVGGTRLVFDGNNDESSINVEN
                     KDSKANLVQSWLSVADPQVTNKQVFIITPPLFRLDAGQKNSIRVIRSGAPLPADRESM
                     YWLNIKGIPSIDDNASANRVEISINTQIKLIYRPPALTKSTPDSQSQQLKWQTAGDVI
                     TVNNPTPYYMNFASVTLNSHEVKSATFVPPKSSASFKLSSTAAPHGTVTWRLISDYGM
                     SLEPHSGSF"
     gene            complement(7740..8285)
                     /gene="sthA"
                     /locus_tag="MOX77_002779"
     CDS             complement(7740..8285)
                     /gene="sthA"
                     /locus_tag="MOX77_002779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein SthA"
                     /protein_id="HCA3358258.1"
                     /translation="MFNKKIIILAMLTAVASTPVFAQNTITFNGKIYDQACTVQVNGS
                     TDTTIDLGNYSKERIAEKGATTDYVPFTVSLVSCPEAGTGVPTQAMFRFHGATDDSNP
                     TYFKNADEGSETGAAGVGISIQNASHSDVTDNTDDAAVSLPTDGSTADFTYYAAMAND
                     GSATVTGGDVSTQVTYTVSYQ"
     gene            complement(8624..9295)
                     /locus_tag="MOX77_002780"
     CDS             complement(8624..9295)
                     /locus_tag="MOX77_002780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HCA3358259.1"
                     /translation="MKQLNGGNVYRPTGKEKNLQAILNIHRHVIQNISPVTITAGKTL
                     DIKIDNQSHILLITKGAIKVCRRIDSIVMGCGVSPMILGLVDAYADLYQLEENSDVFF
                     IAETTCEYYPVPVKDFVEIADEKHLWRDISNILMYRIAFMSNRDRNLIGQDAYSQIKA
                     LLLELWSYPESSRFEINAQNFIQQRTGLSRSRIMQVLSELKAGNYIKILHGRLLELRN
                     LPVSF"
     gene            complement(9679..9988)
                     /locus_tag="MOX77_002781"
                     /pseudo
     CDS             complement(9679..9988)
                     /locus_tag="MOX77_002781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463453.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(10255..10971)
                     /gene="arcA"
                     /locus_tag="MOX77_002782"
     CDS             complement(10255..10971)
                     /gene="arcA"
                     /locus_tag="MOX77_002782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003621071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator ArcA"
                     /protein_id="HCA3358260.1"
                     /translation="MQTPHILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILS
                     EYDINLVIMDINLPGKNGLLLARELREQANVALMFLTGRDNEVDKILGLEIGADDYIT
                     KPFNPRELTIRARNLLSRTMNLGTVSEERRSVESYKFNGWELDINSRSLIGPDGEQYK
                     LPRSEFRAMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDT
                     PEIIATIHGEGYRFCGDLQD"
     gene            11067..11207
                     /locus_tag="MOX77_002783"
     CDS             11067..11207
                     /locus_tag="MOX77_002783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358261.1"
                     /translation="MTKVRNCVLDALSINVNNIISLVVGTFPLDPTVSKTAVILTILT
                     AT"
     gene            11607..12293
                     /locus_tag="MOX77_002784"
     CDS             11607..12293
                     /locus_tag="MOX77_002784"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA/rRNA methyltransferase"
                     /protein_id="HCA3358262.1"
                     /translation="MRVTIVLVAPARAENIGAAARAMKTMGFTDLRIVDSQAHLEPAT
                     RWVAHGSGDIIDNIEVFHTLADALHDVDFTVATTARSRAKFHYYASPAELVPLLQEKS
                     RWMRHAALVFGREDSGLTNDELALADVLTGVPMAADYPSLNLGQAVMVYCYQLAGLMQ
                     QTPESVDIADESQLQALRARLLRLLTTLEAADDHKLTDWLQQRIGLLGQRDTAMLHRL
                     VHDIEKKLTK"
     gene            12507..12572
                     /gene="thrL"
                     /locus_tag="MOX77_002785"
     CDS             12507..12572
                     /gene="thrL"
                     /locus_tag="MOX77_002785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thr operon leader peptide"
                     /protein_id="HCA3358263.1"
                     /translation="MNRISTTTITTITITTGNGAG"
     misc_feature    12508..12628
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00506"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Thr leader region; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF00506"
     gene            12654..15116
                     /gene="thrA"
                     /locus_tag="MOX77_002786"
     CDS             12654..15116
                     /gene="thrA"
                     /locus_tag="MOX77_002786"
                     /EC_number="1.1.1.3"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aspartate kinase/homoserine
                     dehydrogenase I"
                     /protein_id="HCA3358264.1"
                     /translation="MRVLKFGGTSVANAERFLRVADILESNSRQGQVATVLSAPAKIT
                     NHLVAMIEKTIGGQDALPNISDAERIFSDLLAGLASAQPGFPLARLKMVVEQEFAQIK
                     HVLHGISLLGQCPDSINAALICRGEKMSIAIMAGLLEARGHRVTVIDPVEKLLAVGHY
                     LESTVDIAESTRRIAASQIPADHMILMAGFTAGNEKGELVVLGRNGSDYSAAVLAACL
                     RADCCEIWTDVDGVYTCDPRQVPDARLLKSMSYQEAMELSYFGAKVLHPRTITPIAQF
                     QIPCLIKNTGNPQAPGTLIGASSDDDNLPVKGISNLNNMAMFSVSGPGMKGMIGMAAR
                     VFAAMSRAGISVVLITQSSSEYSISFCVPQSDCARARRAMQDEFYLELKEGLLEPLAV
                     TERLAIISVVGDGMRTLRGISAKFFAALARANINIVAIAQGSSERSISVVVNNDDATT
                     GVRVTHQMLFNTDQVIEVFVIGVGGVGGALLEQLKRQQTWLKNKHIDLRVCGVANSKA
                     LLTNVHGLNLDNWQAELAQANAPFNLGRLIRLVKEYHLLNPVIVDCTSSQAVADQYAD
                     FLREGFHVVTPNKKANTSSMDYYHQLRFAAAQSRRKFLYDTNVGAGLPVIENLQNLLN
                     AGDELQKFSGILSGSLSFIFGKLEEGMSLSQATALAREMGYTEPDPRDDLSGMDVARK
                     LLILARETGRELELSDIVIEPVLPDEFDASGDVTAFMAHLPQLDDAFAARVAKARDEG
                     KVLRYVGNIEEDGVCRVKIAEVDGNDPLFKVKNGENALAFYSHYYQPLPLVLRGYGAG
                     NDVTAAGVFADLLRTLSWKLGV"
     gene            15118..>15839
                     /gene="thrB"
                     /locus_tag="MOX77_002787"
     CDS             15118..>15839
                     /gene="thrB"
                     /locus_tag="MOX77_002787"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HCA3358265.1"
                     /translation="MVKVYAPASSANMSVGFDVLGAAVTPVDGTLLGDVVSVEAADHF
                     RLHNLGRFADKLPPEPRENIVYQCWERFCQALGKTIPVAMTLEKNMPIGSGLGSSACS
                     VVAALVAMNEHCGKPLNDTRLLALMGELEGRISGSIHYDNVAPCFLGGMQLMIEENGI
                     ISQQVPGFDEWLWVLAYPGIKVSTAEARAILPAQYRRQDCIAHGRHLAGFIHACYSRQ
                     PQLAAALMKDVIAEPYRARLLPG"
BASE COUNT         3854 a         3774 c         4139 g         4072 t
ORIGIN      
        1 actgacggcc agttggcgaa agcattcgcc cagctgcaac atcgcccgtt tcgcgccaat
       61 atcagcggga tcgtcaaagt gcgtaatgaa taccatgtct acatgacgga tgcgcagggg
      121 aaggtgttgt ttgattcgga aaacaaagcg gtggggcagg attattctcg ctggaatgac
      181 gtctggctta cgttgcgcgg acagtatggc gcccgcagca cggcaaaaga ttctgccgat
      241 cccaatagca ccgtgatgta cgtagccgcg ccgataatca gcgatggacg gatcatcggc
      301 gtcctgactg tcggcaaacc gaatgcggca atggcgccgg tgattaagcg cagcgaacgg
      361 cgcattctgt gggccagcgc cgttttactg ggaattgcgc tggcgattgg cgcggggatg
      421 gtctggtgga ttaaccgctc catcgcccgg ttgacgcgct atgcggattc cgtcaccgaa
      481 aaccgcccgc ttgcgttacc tgcattaggc agcagcgagc tgcgtaaact ggcgcaggcg
      541 ctggagagta tgcgcattaa gctggaaggc aagaatgaca ttgagcagta cgtgtatgcg
      601 ttgactcatg agctgaaaag tccgctggcg gcgatacgcg gcgcggcgga gattctgcgt
      661 gaaggaccgc ccgcggatgt ggttacccgc tttacagaga atatactggc gcaaaatacg
      721 cgaatgcagg cgctggtaga aaccctgctg cgccaggcgc ggctggaaaa ccgacaggat
      781 atccctctcg cgccggttgc tgttgatgag ctatttacgc agcttagcga ggcgcgcagt
      841 attcagttgg cggcaaaaaa gatcacgctt actctacgtc cttcctcgct ggttgtcgtc
      901 gccgacgcgg agcttctggc gcaggcgctg ggcaatgtgt tggacaatgc catcgacttt
      961 acgcctgaaa atggcgttat cacattaagc gctcagccga tgggagagaa agcgatcctg
     1021 caggtgacgg attccggctg tggtattcct gattttgcgc tgccgcgcat tttcgaccga
     1081 ttctattcgt tgccccgtga aaacgggcgt aaaagcagcg ggcttgggct ggcgtttgtc
     1141 agcgaggcgg cgcggctcct caacggtgag gtgacgttgt gcaaccgtcc cgaaggcggc
     1201 gtgctggcct cgttgacact tcaccgtcac ttcacataac ttcaaattct ccccacatcg
     1261 cgttcttaca ctgctggcat tgcaaaggag aacgctatgt tgaaatcccc cctgttgtgg
     1321 aaaatgatta cgttaggcgg cgccatgatc ctgctgttaa ttcccctgat gatggtacgg
     1381 cacaccatcg tggagcgtgc tgattatcga agccatgtag aagccgctat tcgtcagagt
     1441 accagcggcc cgcaaaaggt tgtcggcccg ctggtggcgg ttccggtgac agagctctat
     1501 accgtgctgg aagaggagaa agaggttcag tataagcgca gctatctcta tttttggctg
     1561 ccggagtcgc tattggtcga aggcaatcaa aacgttgaag cgcgaaaaat aggtatttat
     1621 caggggcagg tgtggcatac cgatatggcg ataaaggcag agtttgatgt ggcccgtctg
     1681 catgagctga acagaccgaa tattaccctt ggaaagccct ttatcgtcgt gggcgtcggc
     1741 gatgcgcgcg gtatcagcgc agtaaaagcg ccgcaggtga atggtgaaat gctcactgta
     1801 gaaccgggga ccggcttacc ggaaagtaga gagggcattc atatcccgct accggacagt
     1861 cagtgggcga cgcgcaacct gacgttggcg atgtcgttaa atttaagcgg aaccggcagc
     1921 ttttcactgg ttcctgtcgg gcgtagcagt gaaatgaccc tgaccagtaa ctggccgcac
     1981 ccaaattttg tgggggattt tcttcccggt aaacgcgaaa tcagcggttc aggatttcag
     2041 gctcagtggc aaaccagccg gtttgccacg aatctcggcg aacagtttgc tgatgcgcaa
     2101 aaggtggatt gggacaactt accggcgttt agcgtcgctg tatcgacgcc agccgatcag
     2161 tatcaactga cggacagagc gacgaaatat gccattttgt tgattacgct aacgtttatg
     2221 gctttctttg tcttcgaaac cctgacggga cagcgattac acccgatgca gtatctgctg
     2281 gtagggttat cgctggtgat gttctacctg ctgttgctgg cactgtcgga acatatcggt
     2341 ttcacgccag cctggatcgc cgcaagccta gtgggcgcgt tgatgaatag cgtttatttg
     2401 caggcggtac tgaaaggatg gcgcaatagc gtgctgttta cgttagcgtt attggcgctg
     2461 gatggcgtga tgtgggggtt actgcgttcg gaagatagct cgttgcttct gggtaccggc
     2521 gttctgctac tggcgcttgg cggcgtgatg ttcctgacgc gccatctgga ctggtattcg
     2581 ctctcttgtc agcaacgtaa gtcattaccg ccagtaaaag atgacgaatt acgtttgtgg
     2641 aaataaatct aacgggcgcg cgcgttaacg ttttcccgcg cagcgccaga aaatgtgatg
     2701 ccgtcagtta taggtcaggt ttaatgttgc cgtggcattc gcttgcccgg ccgttaccgt
     2761 ggcggcggtt ttatagtagc gcgcgctaat tttcagggtg gtcgacatat tcatggttcc
     2821 gccgttaacc gtctggctgc catcggcatt ggtggtaatc gtgtgagtaa agagatcaat
     2881 tttttgattg attggcaaac tgtcggtaaa gaaaccagag tccggcgcct gaatacccaa
     2941 ctgtacgcca acgccggttg cgctggttgg cgcgcttgca ttgctcaact ggatgactga
     3001 attatcaggg ttatttccgc tggccggttg ggcgcttaac gatgcggaga tagcggtgcc
     3061 ttgttcgcag gtcaataaga tatcctgctt gcctgtgccc gcggtttgac tgttagcgaa
     3121 actgcctaaa ttgacgctgc ctaaatcaac ggtgatggca ggtgtttcta cccgacatcc
     3181 catcgctttc atgatcaatt gcgtattacc caaatacaga tgggtcagga tatcgccgcc
     3241 agagctttcc gttgcgctat cgcgaaagga tacacgtgcc agtgggcttt ggaatgtcgc
     3301 ggtaccggag gtgatcggac cgcctaaggc gaccagttca acattgtagg cgggggccat
     3361 cgcatggtgg gttttattgc catcgccatt atggtacgta ttatcgattg gcatgacatt
     3421 atcgtaaggg ccagcattcg tttgggtttt aatcgcaatg cccacgccgg aaatcccggt
     3481 gctaaatacc ggcgtgttgt tcccgtcatt cgcattgatt gtcgcggatg tatttgactg
     3541 cgcgctaccg ggttcatata aaaaccgacc ttataatcgc gactacagcc atccattgtg
     3601 acttcggagg tggaaaccca gcccgattgc cacaacactt cgcctgcggt ataggcgtgg
     3661 ctatccacca caagctgcga cggcggggtg atagtgatcg cgccttcatt accggaacgt
     3721 ttacaggagg cgtaactatg accggaatac gcgaacagca gaataagcgc cagatataac
     3781 cttctcatga aaaattcctg cttttatatc aggtgaaata gaaaaatatt attgccatgc
     3841 gatagtgatc gtcacaacgg acgtgaaatc ccctgccgtg acttttccat acggggtata
     3901 catccttgcg gcgacaggca aattggcttc atgggtatta ctgttgatat ccaccgtgta
     3961 agtgacgtta ttggccagat taaccagact tttactgtcc aggttaaaaa gctgtaatcc
     4021 taaatcctgc gccggattgg ccgcgctgtt tgcgtaaatc gcagaagcat aattcggatc
     4081 gggataaggt acgccgttaa atgaaatcgc ggcttttgtg gtcgttgccg ggcaattcgt
     4141 catttttatg gtgaaaggaa tggtggcggt attgccaccg gccacagcga tatccgcccg
     4201 ggcatattgc ccaagagaga tcgtgtcagg taccgtcacg gtacacggat cggcataaat
     4261 taatcccgta acgttaatgt ctacggcatc tgcggtattg tatgccgcgc tgatcgaggg
     4321 cgaccatgat gccagacccg tgaacgttaa cagggcggct aatgcagcaa atctgttcat
     4381 attcatcttt tatcccacca gaatcactgg cattgctcgt gtaagatttc tacgccagaa
     4441 gcggaggggg agctcggtat acgataagag acctgacacc ggtctgctgc tgttggcccc
     4501 cacttcacta ataaccgccc ttgtttttcc agtccggtta accaggcttg ccccgcatca
     4561 ccaacaaaac tgctgtgatt gtctggtttt gttaaagacg agacggtcgc gccaaaagga
     4621 acaggcagat tgtttatgcg ggttaatacc atcaatgcct tgtagccaat attggtttta
     4681 tattcagccc tgaccaccgc gccacgggta ggcaccagcg ttttactggt atcaatgagc
     4741 tcaatatttt ttctaatgcc tgtcgtatct aaagacactt cattacgatg ataaggcgaa
     4801 gcattaggta cgacggcata accccgaaaa tcggtgtcca cgcccgtttc gttattcacg
     4861 gggacacctg ctgcgccagg ggctttaacc aatatgatgg tgtcgtccat tggctgggat
     4921 agtgtcaggc catttcgatg tagcagtacg ccgccctgaa cgccataatt caggcgacgc
     4981 atatgattat cgtagctata cccgccgtta atatccgcat acgtcccgtt ataggttgcg
     5041 ctcacattac cgctggtggc tttctcttga gaggaataac cttcctgaac gctccatgag
     5101 agatttttct gtgccagcgc tgtgccgttt aaaccgacag tatgcgtgat atcgccgtct
     5161 ttcgcggagt tcatattgta ggtggcatac gttgacggca taaaggcatc taacggaata
     5221 ctaatattga ttgaaatttg ctggtcatta ctgtcttccg tatcgtcgtc ttcatcctga
     5281 gtattatcgg cgttcagcgt ataagaatag ttaatgccat agcttacgtt atgccatgtg
     5341 ttgttatagc caatacctaa tgatgtggta tgagtgtcat tccagtaatc ttcattatat
     5401 aaagtgagtg aaatggaacc gtagataatg tcttgcgaca acgacaggtc ggtgcgattg
     5461 cggacatgat catagtgact attatcgcta taggtatcca gcacatcctc aagagcgtag
     5521 taatctttgg tcgaataacg gtaaccggcg acagtaaaat tggtgcctgt tgactgaata
     5581 tctttgctgt aacgaatacg ccaggactgt ccggtaagcg tatcgctaac cacatcgcct
     5641 gctttaattt ttgaccatga gttggtgacg tctaaagaca atgcgcccag atcgccaagg
     5701 tttaagcctg tcccgatgag cgccgcatga taaacatcat tgctcagcgt actctctatt
     5761 ccgccatagg cggttacgcc gcctgctaat ccgtataagg ccgtcagttc tgcgaaattc
     5821 tgttgcgcgg aatgcgtatc tgatgaacgc gtgcggccta ccgtcaagtc gtatttcagg
     5881 tggccttcac gctgtaatac cggaacgctg gcgtagggca caatgaaatg ctgttcagaa
     5941 ccatcggatt ctttgatggt gacgtacagg tcgcccgaac cgccggttgg ataaagatcg
     6001 ttgatggcga atgggcccgc cggaacgtta gttttgtaga tggtataacc gttttgttca
     6061 acggttacct gcgcgctgct tttggccacc ccgcgaatga ccggggcgaa ccctttcata
     6121 ctgtccggca acatatcgtc atcagaagag atctgtacgc ccttaaatga aatactgtca
     6181 aagacgtctg cgggcgtgtt attttccccg gcgatcagct gtccttttaa aaattcgata
     6241 tcgcgagaaa cataggtgta ggcagaatcc cagctatttt gcccatcgct atcatgattc
     6301 caggttgagt agttacgaaa acgccatgcg ccaatgttaa taccagggcg caggttagcg
     6361 tattcgctat tttccgtccg gttttcatca atatcgtgat cctgcgatcc ggtaaaactg
     6421 tagttcagca aaaaagcatt aatgccttca tcccatttgc tggtagggac gaattctcgc
     6481 gggtcggcga tcaacgcgat ttgagggatc gctaaatcca gccggttacc gatgacatta
     6541 aactttgcta cagcgccagc cagcagacta agatcggtac acccgtttgg gtcattttta
     6601 agctcgggga agttttctgt ttttacgccc cactgcttga gttgttcaac gctaagacat
     6661 ggctgtaggg agagcttatt atctgctgat tttttatttt taaaggcaat attttttgtt
     6721 tcaacattag tgttattaat ataaatatca acattatagg tgccttctgc ctgcccccct
     6781 tttcgaaaac cgatagatcg acattctcca cgcccggttc atcattttcc aacgataatg
     6841 gattaaaatg atcatgcgct aacgctggtt ttatggatca gcatataaag agaaacgata
     6901 acgctaattg agaacggggc tctactctgg agaattgcac agtaaaagtc ctgaaagggt
     6961 aaaagtaaag tgaagtcgtt aatggctaga atgaaccgga atgcggctct aaactcatcc
     7021 cataatcgct gattaatcgc cacgttaccg taccatgagg ggcggcagtc gaactcaatt
     7081 taaatgacgc tgatgatttt ggcggaacga aggtcgctga tttcacttca tggctgttaa
     7141 gcgtcacact ggcaaagttc atataatagg gggtagggtt atttacggta ataacatccc
     7201 ctgccgtctg ccattttaat tgttggctct ggctatcagg cgttgatttg gttaatgctg
     7261 gcggtcgata aataagcttt atttgggtat taatggagat ttccacgcgg ttcgcggagg
     7321 cattatcatc aatagaagga atacccttaa tattgagcca gtacatagac tcccgatctg
     7381 caggtagagg ggcgccagag cgaataaccc gaatactgtt cttttgcccg gcatcaaggc
     7441 gaaaaagagg cggggtgata ataaacacct gcttatttgt gacctgggga tcggcaaccg
     7501 ataaccatga ctgaacaaga ttcgctttgc tgtctttatt ctctacattg attgacgact
     7561 catcattatt gccgtcgaaa accagtcggg ttccgccaac aacaatgctg gcatgggcaa
     7621 catggcttgt cagtaatacg accaacacgg atttctttat gtgtttcatt ttttactctg
     7681 taaagatgtt ttacgctatg gactggcatc ctgcctgtcc acatcaggat gagaatgcct
     7741 tactgatacg aaacggtata cgtaacctga gtgctaacat ctccaccggt tacggttgcg
     7801 gaaccatcgt ttgccatggc ggcgtaatag gtaaagtctg ctgtcgagcc gtcggttggc
     7861 aggcttactg cggcatcatc cgtgttatct gtcacatcgc tatgtgaagc gttctgaata
     7921 gaaataccga cacccgcggc gcccgtttcc gatccttcgt ccgcgttttt gaagtacgtt
     7981 gggttggaat catctgttgc gccgtggaag cggaacatgg cctgggtcgg tacgccagtc
     8041 cctgcttccg ggcagctaac caggcttacg gtaaacggca cgtaatcggt tgtggcgcct
     8101 ttttccgcga tgcgttcttt gctgtaatta cctaaatcaa tggtggtatc cgtggagcca
     8161 ttaacctgaa ccgtacacgc ctgatcgtaa attttgccat tgaacgtaat cgtgttctgg
     8221 gcaaataccg gtgtggatgc tacggcagtt aacattgcca ggatgataat tttcttatta
     8281 aacatattaa ttgttgcctg attctattcg ctgaaaaata aagatagcta tataaaataa
     8341 aatattatat tttactctgt atgcgcttct ttctgttctg tagataagca ggcggctatt
     8401 ctacgtatat caactatgaa ctcaataaaa attctgatgc aatattgaac ggcagtccag
     8461 tttcggaccc ggtaacaaag tttaataaaa taccactaaa gaagtacggt agatgactgg
     8521 atttatagag caagatctct tttttgataa tagttattat ttcctggagg atttatttaa
     8581 ctctatattg ctttattttt aataatatac gacgcttgtt catttaaaat gaaaccggca
     8641 ggtttcgaag ctctaacagt cttccatgca gtatttttat atagttcccc gcttttaatt
     8701 ctgaaagtac ctgcatgata cggctgcgtg aaagcccggt tctctgctgt atgaagttct
     8761 gtgcgttgat ctcaaatcgt gagctttcag gatacgacca cagttcaagt aacagcgctt
     8821 ttatctggct ataggcgtcc tgcccgataa ggtttctgtc acggttactc atgaaagcaa
     8881 tgcggtacat caggatgttc gaaatgtcac gccagagatg cttttcatcg gctatttcca
     8941 caaaatcttt tactgggaca ggataatatt cacaggtggt ttcggcgata aaaaagacgt
     9001 ctgaattctc ttctaactgg tataagtcgg cataggcatc tacaaggcct aaaatcattg
     9061 gcgagacacc acagcccatt acaatactgt cgatacgccg acatacttta atagcgcctt
     9121 tagtgattaa caggatgtgg gattgattat caatcttgat atccagggtt ttaccggccg
     9181 taatagtgac aggggagatg ttttgaataa cgtgccgatg aatatttaaa atggcttgca
     9241 ggtttttttc tttccctgtg ggacgataca cattcccgcc gtttaactgc ttcatatctt
     9301 ccccattatt atggctgata aagtggttga ctattaaaag gtaaacataa atttaatatt
     9361 cacttaaatt ataattaagt aaattaaaat agccaacaag aatatttaag tcaatgtatt
     9421 caccttatca atgcatgagc gacaacgctg tttttaaggt taaccatagt aaatgtgatg
     9481 attttatttg caatcatttt atgacagcta tcataggtac cgtgcttaac gagcgcgtag
     9541 agcgtacagg atagcgaagc gatgaacatc gctgttggag gatacgaatg agagaaaagt
     9601 acaaaatgca agcgggcggc gttttactga gcgaaatcgc cgcctgccgg aactcctccc
     9661 gtcgggagcc ataagcggtt agcggtactg gacgatcagg ctttgaatct ccggatgatc
     9721 ttttaacgac acgtgccgta ccgtggcgat tccattcatc aacgaaatag cgtttccaga
     9781 cggtgtggcg actgtctgca aatgggggat tccgcaaaca tgatacctcg atattgcgat
     9841 cgtgaggcgc aagattacaa ccatattcga caatctggcc tttgaaatga ataacgcctg
     9901 cggagaccgg cgcggtagca gccagcgcgg ctgatgaagc tgacatcgct gcacaaaaca
     9961 ggtagcagca taatggtgat tttttcatcc tgtgaaacct cacgtcctgt gagcatcccc
    10021 ttaatttttg gggaccaaca aatcccgtgt attactcttt aatgtaaata cacaaactac
    10081 cttaactttc gcaagctgag ataaacagcg ctatacgaca atttttatgt aaaagagtac
    10141 gtcataacgg caggtcagga gggaaagcgg ggccgcttag cggaagggga gcataagaaa
    10201 cagccagtaa gaataactta ccggctgttt ttacggtttg gcgcctgggc cgaattaatc
    10261 ctgcaggtcg ccgcagaagc gataaccttc gccgtgaatg gtggcgatga tttccggcgt
    10321 atccggcgtg gattcgaaat gcttacgaat acgacgaatg gtgacgtcaa cagtacggtc
    10381 atgcggcttc agctcgcgtc cggtcatttt tttcagcagc tcggcacgag actgaatttt
    10441 gccagggttt tcgcagaagt gcagcatcgc gcggaactcg ctgcgcggta gtttatactg
    10501 ctcgccgtcc gggccgatca gtgaacggct gttgatatcc agttcccaac cgttgaactt
    10561 atagctttca acgctacgac gctcttcgct gacggtaccc aggttcatgg tacgggacag
    10621 caggttacgg gcacggatgg tcaattcgcg tggattaaac ggtttggtga tgtaatcatc
    10681 cgcgccgatt tcgaggccga gaattttgtc gacttcgtta tcgcggcccg tcaggaacat
    10741 cagcgcaaca ttagcctgct cacgcagttc acgcgctaac aggagaccgt ttttccctgg
    10801 cagattgata tccatgatca ccaggttgat gtcatattca gagaggatct gatgcatttc
    10861 cgcgccatct gtcgcttcga atacatcata gccttccgct tcgaaaatac ttttcaacgt
    10921 gttgcgtgtt accaactcgt cttcaacgat aagaatgtgc ggggtctgca tgtttgctac
    10981 ctaaattgcc aactaaatcg aaacaggaag tacaaaagtc cctgacctgc ctgatgcatg
    11041 tcgcaaatta acatgatcgg cgtaacatga ctaaagtacg taattgcgtt cttgatgcac
    11101 tttccatcaa cgtcaacaac atcattagct tggtcgtggg tactttccct ctggacccga
    11161 cagtgtcaaa aacggctgtc atcctaacca ttttaacagc aacataacag gctaagacgt
    11221 accggacacc taataaaact acgcttcgtt gacatatatc aagttcaatt gtagcacgtt
    11281 aacagtttga tgaaatcatc gtagctaaat gctagctttc atcacaaatt tgcaatattc
    11341 caactagtta cgtaagccaa ctaataaatg cgatgaatcc aaagaacagg atctatttta
    11401 aattaaatta tcctaaataa acagcaggat aacgatgttc tgttaacata aacagcaata
    11461 gtacagatac gcaatagtgt agcgtctttt acgaaatcaa aaatgctttt tcagtgatat
    11521 ccgttaaaat tttgtaaatt tgcgaagcgt aatatgctta caaacgccag ctaatttcct
    11581 gtaaattagt caaaaagagt aatgaaatgc gtgtaacaat cgttcttgtc gctcccgcca
    11641 gagcggaaaa tatcggcgca gccgcccggg ctatgaagac catgggattt actgacctgc
    11701 gtattgtcga cagccaggcg cacctagagc ccgctacccg ttgggtcgca catggatctg
    11761 gagatattat tgataatatt gaggttttcc acacccttgc cgacgcgctc cacgatgtgg
    11821 attttaccgt agcgacgaca gcccgcagcc gggcaaaatt tcattactac gcttcgcccg
    11881 ctgaactggt tcccttatta caggaaaaat cacgctggat gcgtcatgcc gcgctggttt
    11941 ttggccgtga ggattccggt ctgaccaacg acgagctggc gctggcggat gtattgaccg
    12001 gcgtgccgat ggcggcggat tacccttcgc tcaatctggg tcaggcggtc atggtgtatt
    12061 gctatcaatt agcaggttta atgcaacaga ccccggaatc cgttgatatt gctgatgaat
    12121 cgcagttaca ggcgttacgc gcgcgccttt tacgcctgct aaccactctg gaggcggccg
    12181 atgaccacaa attaaccgac tggctacaac agcgaatcgg cctgctggga cagcgagata
    12241 cggcaatgtt gcaccgtttg gtccatgata ttgaaaaaaa actaacaaaa taacgtgttg
    12301 taatttttaa aataataaga gattacgtct ggttgcaaga gatcataaca ggggaaattg
    12361 attgaaaata aatatatcgc cagcagcaca tgaacaagtt tcggaatgtg atcaatttaa
    12421 aaatttattg acttaggcgg gcagatactt taaccaatat aggaatacaa gacagacaaa
    12481 taaaaatgac agagtacaca acatccatga accgcatcag caccaccacc attaccacca
    12541 tcaccattac cacaggtaac ggtgcgggct gacgcgtaca ggaaacacag aaaaaagccc
    12601 gcacctgaac agtgcgggct tttttttcga ccagagatca cgaggtaaca accatgcgag
    12661 tgttgaagtt cggcggtaca tcagtggcaa atgcagaacg ttttctgcgt gttgccgata
    12721 ttctggaaag caattccagg caagggcagg tagcgaccgt actttccgcc cccgcgaaaa
    12781 ttaccaacca tctggtggcg atgattgaaa aaactatcgg cggccaggat gctttgccga
    12841 atatcagcga tgccgaacgt attttttctg acctgctcgc aggacttgcc agcgcgcagc
    12901 cgggattccc gcttgcacgg ttgaaaatgg ttgtcgaaca agaattcgct cagatcaaac
    12961 atgttttgca tggtatcagc ctgctgggtc agtgcccgga tagcatcaac gccgcgctga
    13021 tttgccgtgg cgaaaaaatg tcgatcgcga ttatggcggg actcctggag gcgcgtggac
    13081 atcgcgtcac ggtgatcgat ccggtagaaa aactgctggc ggtgggccat taccttgaat
    13141 ctaccgtcga tatcgcggaa tcgactcgcc gtatcgccgc cagccagatc ccggccgatc
    13201 acatgatcct gatggcgggc tttactgccg gtaatgaaaa gggtgaactg gtggtgctgg
    13261 gccgtaatgg ttccgactat tccgccgccg tgctggccgc ctgtttacgc gctgactgct
    13321 gtgaaatctg gactgacgtc gatggcgtgt atacctgtga cccgcgccag gtgccggacg
    13381 ccaggctgtt gaaatcgatg tcctaccagg aagcgatgga gctctcttac ttcggcgcta
    13441 aagtccttca ccctcgcacc ataacgccta tcgcccagtt ccagatcccc tgtctgatta
    13501 aaaataccgg caatccgcag gcgccaggaa cgctgatcgg cgcgtccagc gacgatgata
    13561 atctgccggt taaagggatc tctaacctta acaacatggc gatgtttagc gtctccggcc
    13621 cgggaatgaa agggatgatt gggatggcgg cgcgtgtttt cgccgccatg tctcgcgccg
    13681 ggatctcggt ggtgctcatt acccagtcct cctctgagta cagcatcagc ttctgtgtgc
    13741 cgcagagtga ctgcgcgcgt gcccgccgtg cgatgcagga tgagttctat ctggagctga
    13801 aagaggggct gctggagccg ctggcggtta cggagcggtt ggcgattatc tctgttgtcg
    13861 gcgacggtat gcgcacgcta cgcggcattt cagcgaaatt cttcgccgcg ctggcgcggg
    13921 ctaatatcaa tatcgtggcg atcgctcagg gatcttctga gcgttccatt tctgtggtgg
    13981 tgaataacga cgatgccacc accggcgtgc gggtaacgca ccagatgctg ttcaataccg
    14041 atcaggtgat tgaagtgttt gtcattggcg tcggcggcgt cggcggcgcg ctactggaac
    14101 agcttaaacg tcagcaaacc tggctgaaga acaagcacat cgatctacgc gtgtgcggcg
    14161 tggcgaactc aaaggcgttg ctaaccaatg tgcatggcct gaatctggac aactggcagg
    14221 cggaactggc gcaagcgaac gcgccgttca atctgggacg tttaattcgc ctggtgaaag
    14281 aatatcatct actcaatccg gtgattgttg attgtacctc cagtcaggcg gtggccgacc
    14341 agtatgccga cttcctgcgc gaagggttcc atgtggtgac gccgaacaag aaagcgaaca
    14401 cctcgtcgat ggactactac catcagctac gtttcgccgc cgcgcaatca cggcgcaaat
    14461 tcttgtatga caccaacgtc ggcgccggtt tgccggtaat cgaaaacctg caaaacctgc
    14521 tgaatgcggg tgatgaactg caaaaatttt ccggcattct ttccgggtcg ctctctttta
    14581 ttttcggtaa actggaagag gggatgagtc tctcacaggc gaccgctctg gcgcgcgaga
    14641 tgggctatac cgaacccgat ccgcgcgacg atctttccgg tatggatgtg gcgcgtaaac
    14701 tgttgatcct cgcccgcgag acgggccgcg agctggagct ttccgatatc gtgattgaac
    14761 cggtgttgcc ggacgagttt gacgcctccg gcgatgtgac cgcctttatg gcgcatctgc
    14821 cgcagcttga cgacgcgttt gccgcccgtg tggcgaaagc tcgtgatgaa ggtaaggtat
    14881 tgcgctatgt gggcaatatc gaagaggatg gcgtgtgccg cgtgaagatt gccgaagttg
    14941 atggtaacga tccgctcttc aaagtgaaaa acggtgaaaa cgcgctggcg ttctacagcc
    15001 attattatca gcccttgccg ttggtgctgc gcggctacgg cgcaggcaat gatgtgacgg
    15061 cggcgggcgt gtttgccgat ctgttacgga ccctctcatg gaagttagga gtttaacatg
    15121 gtgaaagtgt atgccccggc ttccagcgcg aacatgagcg tcggtttcga cgtgttgggc
    15181 gcggccgtca cacccgttga cggcacgttg ctgggcgatg tggtatccgt tgaagcagcg
    15241 gatcatttcc gtctgcataa cctggggcga tttgccgata aactgccgcc ggagccgcgt
    15301 gaaaatattg tttatcagtg ctgggaacgt ttttgccagg cattggggaa aaccatcccg
    15361 gtggcgatga cgctggaaaa aaatatgccg attggttccg ggttagggtc cagcgcctgt
    15421 tccgtcgtcg ccgcgctggt cgcgatgaat gagcactgcg gcaaaccgtt aaacgacacg
    15481 cgtctgttgg cgctgatggg cgagctggaa ggccgtatct ccggcagcat ccattacgat
    15541 aacgtcgcgc cgtgctttct tggcggtatg cagttgatga ttgaagaaaa cggcattatt
    15601 agtcagcagg tgccgggctt tgatgagtgg ctatgggtac tggcttatcc gggcattaaa
    15661 gtttccaccg cagaagcacg ggccattttg cctgcgcagt atcgccgtca ggattgcatt
    15721 gcgcatggac ggcatctggc cggttttatt cacgcctgtt actcgcggca gccgcagctt
    15781 gccgccgcgc tgatgaaaga tgttattgcc gaaccatacc gcgcgcgttt actgccggg
//
LOCUS       DAGWFR010000086        15821 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.088, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000086 DAGWFR010000000
VERSION     DAGWFR010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 15821)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15821)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15821
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.088"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..462
                     /gene="folK"
                     /locus_tag="MOX77_002788"
     CDS             <1..462
                     /gene="folK"
                     /locus_tag="MOX77_002788"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000150775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HCA3358266.1"
                     /translation="ALGSNLASPLEQVNAALKAIADIPDSRIVAVSSFYRTPPLGPQD
                     QPDYLNAAVALDTALAPEELLNHTQRIELQQGRVRKAERWGPRTLDLDIMLFGDEVIN
                     TDRLTVPHYDMKNRGFMLWPLFEIAPELVFPDDKGLLIELMSQMSPCPDRW"
     gene            857..1441
                     /locus_tag="MOX77_002789"
     CDS             857..1441
                     /locus_tag="MOX77_002789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000709193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HCA3358267.1"
                     /translation="MKKAILAAAMVMAMGSTSAMAVEGGQIEFHGLVSATTCSKVVSS
                     SRGNQATDGDVYLTTAAPGDITEGVAANAYGALPAPFSIILDCSGAADVTDATKASLV
                     MDSSFSNTTGTLDNDTTLSVAGETGAENVNIAIHDADTKTQVKIDGAEIHEASFKNKV
                     ATYNFMASYVRADASKEVTTGHVTTNAMYTFTYQ"
     gene            1620..2354
                     /locus_tag="MOX77_002790"
     CDS             1620..2354
                     /locus_tag="MOX77_002790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000967611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial chaperone"
                     /protein_id="HCA3358268.1"
                     /translation="MLYVKKSLTAIVLASAVFSTFSYADIIISGTRIVYDENKKDVSI
                     RLENKGTRPLLVQNWIDLGNDNDDPGSIKAPFVSTPPVSRVEPKRGQSVKIMYTQASA
                     LPKDRESVFWFNVLEVPPKADTSKEENKSLLQLAFRTRIKLFYRPTGLKGQPAEAAKQ
                     LKWQIASEQGYAVLRADNSTPYFVSFNDATYTAGGKRYDVEATMVAPFSKSSFTVKGL
                     SGASAGKLEYHAINDFGGLIEGSVSL"
     gene            2414..5020
                     /locus_tag="MOX77_002791"
     CDS             2414..5020
                     /locus_tag="MOX77_002791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015406108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane usher protein"
                     /protein_id="HCA3358269.1"
                     /translation="MPKKTMLAVCCALFYSQSSISAESVEYDSSFLMGSSASTIDISK
                     YSDGNPTPVGTYSVKVFVNENPVSSLSIPFIDIGKVSAEACLTQKNLAQLHIKQPEIN
                     ATNQILKKGEEEDQDCLNLPVAIAHSEVNFDMGEQRLDITVPQAWLIEGYDGYVEPSL
                     WEDGIPAALLSYSANGYHSTNGSADNDSMYAAFNTGINLGAWRFRANGNYNWTKDSGS
                     SFDYQNRYLQRDLPSMRSQLVVGETYTTGETFDSVSIRGARLYSDNRMLPSQLANYAP
                     IIRGVANSNAKVSITQGGYKIYESTVPPGPFEISDISPSGYGSDLIVTVEEADGSKRT
                     FSQPFSSVMQMQRPGVGRWDFSAGEVNDDELHDKPYMAQGSYYYGLNNFLTLYTGVQG
                     TDNNYLAGLLGVGLNTPLGAFALDVTQSRTEIPEDKTYKGQSYRLTWNKLIEPTATSF
                     NVAAYRYSTQDYLGLNDALQLIDDAKHKDADDRNTMLNYSRMKNQVTVSINQPLRFKE
                     VDYGSFFLSGSWTDYWATNESRTDYSLGYGRGFSWGSLSINLQRSWDEDGEKDDSLYI
                     NFNVPLENLLGGGRRKSGFSSLTAQMRTDFDGGYQLSMNSNGSSEDHTLNYSVNTGYT
                     MQKNEKNITDVSGYASYQSPWGDVTASASANNDSSRQYSLATTGDFVLHGGGVTFTND
                     NFGNSDAIVLVKAPGAKGARINGGNSTIDRWGYGATNSLSAYRENQVNIDIDTLENDV
                     ELKSTSTTLIPRDGAVVLASFETDQGRSVILNMSRNDGKALPFGAEVYENDVQIDNMG
                     QGGQAFVRGISDAGELSVRWFEENQPATCLATFALPATQQTVGSSQTLLLDHITCRVN
                     NLKSNGIDNEKE"
     gene            5007..5573
                     /locus_tag="MOX77_002792"
     CDS             5007..5573
                     /locus_tag="MOX77_002792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000827925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HCA3358270.1"
                     /translation="MKRNKYLLAASVLAVIFPLTSQAENINVDFTATVLATTCSMSIA
                     ALDGSNLSGDATSGYTLNVGDVGLDKIIKKSAESQKNFKFVAKDCSAALTKITTTLAS
                     STDASGNFIKNQSAASGAATNVGMGFKRKSTTDETYFTPGSGSFSWTSDERAANEVEM
                     TVALRELTDGAGTTGAFSSTATFNFTYQ"
     gene            5588..6196
                     /gene="staE"
                     /locus_tag="MOX77_002793"
     CDS             5588..6196
                     /gene="staE"
                     /locus_tag="MOX77_002793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000744142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein StaE"
                     /protein_id="HCA3358271.1"
                     /translation="MKKQILRVVIFSSLIATGAGISTMTYADGTNSLDLTVNANITAG
                     TCSASVVEGDTITDTIAFGNVYISEVYAKSKIKLFKLRFSDCVGLKDKKAKFRLAPNN
                     VACPGSSGTDGQFANASTSTTKAAMVAMEVWTTETPGGTGAVKLHCWSKPEQTVDLSG
                     ASVTTPVDFPLSAMMVAQSGGTLQNMTAGDFYSPTTFTITYQ"
     gene            6208..6792
                     /locus_tag="MOX77_002794"
     CDS             6208..6792
                     /locus_tag="MOX77_002794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001253684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HCA3358272.1"
                     /translation="MRRLREPTLATLFSGLATALFSATLYADTNVNFTASVQKDTCQI
                     KIDGNGTVNFATIAPAYFADGITAETDYEGGKEFTIKLISCPISDGKITNVTFNFAPL
                     NGQFSPENQQVFPNDIATDAGGVDNVGVVIFTTDSPRTNVLNTDGSSRATFAASTYSD
                     TVWTFYSRMQKIRSAEKVTTGELSSRVLVNVSYE"
     gene            6829..8004
                     /locus_tag="MOX77_002795"
     CDS             6829..8004
                     /locus_tag="MOX77_002795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000925246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial-like adhesin"
                     /protein_id="HCA3358273.1"
                     /translation="MLLKNTTWFAAFFLMMAIMSNCYAINTTLAVGDYASSEHDGPSG
                     DSVFTDNSHNFGQTIAIHKETALRQITVFNWSGIQYVMEMFCNGSGNHTYLQLTHNYI
                     SAGKSYNGHPLYKTSIPGFYFTIEMTFLQPAENMTSSTFWFDKTSTPITSEFTEFPSA
                     CSRTNVYSNLGKLMYGLKIYAYVDSDFAPTEAQLQSFTLSKNGDSDFYIDNPGSGLSN
                     YKMKFNLAATGLKAVWPTCSASTISGTNVSGSTVKLGSFYPKQIMEGLSPTKFQINLS
                     SCQYINNIEVKLASNNVGTKNTSLLTNNSTSNTKASGIGVLIEGLKSSSSAQMVLKPN
                     DSSSIYKDTTNNTGDGSPVGSATKSLYFQATLKPDGDNPTINPGDFKATAQFSITYP"
     gene            8114..8908
                     /gene="panB"
                     /locus_tag="MOX77_002796"
     CDS             8114..8908
                     /gene="panB"
                     /locus_tag="MOX77_002796"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000043003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HCA3358274.1"
                     /translation="MSKPTTIAVLQKCKQEKKRFATITAYDYSFAKLFADEGINVMLV
                     GDSLGMTIQGHDSTLPVTVEDIAYHTRAVRRGAPNCLLLSDLPFMAYATPEQAFENAA
                     IVMRAGANMVKIEGGAWLVDTVKMLTERAVPVCGHLGLTPQSVNIFGGYKIQGRGDAG
                     QILLDDALALEAAGAQLLVLECVPVELAKRVTEALSIPVIGIGAGNVTDGQILVMHDA
                     FGITGGHIPKFAKNFLAEAGDMRAAVRQYMAEVESGVYPGEEHSFH"
     gene            9034..9888
                     /gene="panC"
                     /locus_tag="MOX77_002797"
     CDS             9034..9888
                     /gene="panC"
                     /locus_tag="MOX77_002797"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HCA3358275.1"
                     /translation="MLIIETLPLLRQHIRRLRQEGKRVALVPTMGNLHDGHMKLVDEA
                     KARADVVIVSIFVNPMQFDRPDDLVRYPRTLQEDCEKLNKRKVDYVFAPAVEEIYPQG
                     LEGQTYVDVPGLSTMLEGTSRPGHFRGVSTIVSKLFNLIQPDIACFGEKDFQQLALIR
                     KMVADMGYDIEIVGVPIIRAKDGLALSSRNAYLTAEQRKIAPGLYNVMNSIAEKLIAG
                     NRELQEIIAIAEQELNEKGFRADDIQIRDADTLLELTETSKRAVILAAAWLGQARLID
                     NQSVTLAQ"
     gene            9983..10363
                     /gene="panD"
                     /locus_tag="MOX77_002798"
     CDS             9983..10363
                     /gene="panD"
                     /locus_tag="MOX77_002798"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HCA3358276.1"
                     /translation="MIRTMLQGKLHRVKVTQADLHYEGSCAIDQDFLDASGILENEAI
                     DIWNVTNGKRFSTYAIAAERGSRIISVNGAAAHCAEVGDIVIIASFVTMSDEEARTWR
                     PKVAYFEGDNEMKRTAKAIPVQVA"
     gene            complement(10370..11599)
                     /locus_tag="MOX77_002799"
     CDS             complement(10370..11599)
                     /locus_tag="MOX77_002799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HCA3358277.1"
                     /translation="MVMRVVLILLFFFAGNVLAALPARYMQTTKDAAIWSQIGDKMVT
                     VGNIRAGQILSVTPVAVDYYAFKFGFGVGFIDKGHLGPVQGKQKVEDGLGDLNKPLSN
                     QNLVTWKDTPVYNAPDISSAPFGVLVDNLRYPIISKLKGRLHQTWNQIRIGDRLAYVN
                     AMDAQEDNGIPILTYHHILRDEENTRFRHTSTTTSVRAFSNQMTWLRDRGYATLTMYQ
                     LEDYIYNRANFPARAVAITFDDGLKSVSRYAYPVLKQYDMKATAFIISSRIKRHPQKW
                     NPRSLQFMSVSELRKISDVFDFQSHTHFLHRVDGHRRPILYSRSYHNILFDFERSRRA
                     LTQFTPHVFYLSYPFGGYNATAIKAAKDAGFHLAVTTVRGKVKPGDNPMLLKRLYILR
                     TDSLETMSRLIVNQPQG"
     gene            complement(11661..12101)
                     /locus_tag="MOX77_002800"
     CDS             complement(11661..12101)
                     /locus_tag="MOX77_002800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HCA3358278.1"
                     /translation="MLGWVITCHDDRAQDMLDRLERKNGPLAQCRAVNFWRGLSSNML
                     SRMMCDALHATDSGEGVIFLTDISGAAPYRVASLMSHKHPQCEVISGISYSLIEEMIP
                     LRESMSSSAFRDQIVALGAPDVTSLWHQQQKNPPFVLLHDLYEF"
     gene            complement(12206..12976)
                     /locus_tag="MOX77_002801"
     CDS             complement(12206..12976)
                     /locus_tag="MOX77_002801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001747261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCA3358279.1"
                     /translation="MMQLYWVALKSIWAKEIHRFMRIWVQTLVPPVITMTLYFIIFGN
                     LIGSRIGEMHGFSYMQFIVPGLIMMAVITNSYANVASSFFSAKFQRNIEELLVAPVPT
                     HVIIAGFVGGGVARGLCVGILVTAISLFFVPFQVHSWVFVALTLILTAILFSLAGLLN
                     AVFAKTFDDISLIPTFVLTPLTYLGGVFYSLTLLPPFWQGLSHLNPIVYMISGFRYGF
                     LGIHDVPLVTTFGVLVIFIATFYLLCWSLIQRGRGLRS"
     gene            complement(12973..13899)
                     /locus_tag="MOX77_002802"
     CDS             complement(12973..13899)
                     /locus_tag="MOX77_002802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCA3358280.1"
                     /translation="MTIALELQQLKKTYPGGVQALRGIDLQVEAGDFYALLGPNGAGK
                     STTIGIISSLVNKTSGRVNVFGYDLEKDVVNAKRQLGLVSQEFNFNPFETVQQIVVNQ
                     AGYYGVEHKEAVLRSEKYLKQLDLWEKRHERARMLSGGMKRRLMIARALMHEPKLLIL
                     DEPTAGVDIELRRSMWGFLKDLNAKGTTIILTTHYLEEAEMLCRNIGIIQHGELVENT
                     SMKNLLSKLKSETFILDLAPKSPLPKLTGYQYRLVDTSTLEVEVLREQGVNSVFSQLS
                     EQGVQVLSMRNKANRLEELFVSLVHEKQGDRA"
     gene            14008..14670
                     /gene="can"
                     /locus_tag="MOX77_002803"
     CDS             14008..14670
                     /gene="can"
                     /locus_tag="MOX77_002803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonate dehydratase"
                     /protein_id="HCA3358281.1"
                     /translation="MKDIDTLISNNALWSKMLVEEDPGFFEKLAQAQKPRFLWIGCSD
                     SRVPAERLTGLEPGELFVHRNVANLVIHTDLNCLSVVQYAVDALEVEHIIICGHSGCG
                     GIKAAVENPELGLINNWLLHIRDIWLKHSSLLGKMPEEQRLDALYELNVMEQVYNLGH
                     STIMQSAWKRGQNVTIHGWAYSINDGLLRDLDVTATNRETLENGYHKGISALSLKYIP
                     HQ"
     gene            complement(14728..15264)
                     /gene="hpt"
                     /locus_tag="MOX77_002804"
     CDS             complement(14728..15264)
                     /gene="hpt"
                     /locus_tag="MOX77_002804"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004204384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine phosphoribosyltransferase"
                     /protein_id="HCA3358282.1"
                     /translation="MKHTVEVMIPEAEIKARIAELGRQITERYKDSDSEMVLVGLLRG
                     SFMFMADLCREVQVPHEVDFMTASSYGSGMSTTRDVKILKDLDEDIRGKDVLIVEDII
                     DSGNTLSKVREILGLREPKSLAICTLLDKPSRREVDVPVEFVGFSIPDEFVVGYGIDY
                     AQRYRHLPYVGKVVLLDE"
     gene            15470..>15821
                     /locus_tag="MOX77_002805"
     CDS             15470..>15821
                     /locus_tag="MOX77_002805"
                     /EC_number="1.1.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459174.1"
                     /note="quinoprotein glucose dehydrogenase; catalyzes the
                     formation of D-glucono-1,5-lactone from D-glucose and
                     ubiquinone; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane-bound PQQ-dependent dehydrogenase,
                     glucose/quinate/shikimate family"
                     /protein_id="HCA3358283.1"
                     /translation="MAENNARSPRLLVTLTALFAALCGLYLLIGGVWLVAIGGSWYYP
                     IAGLVMLVVAGLLWRSKRAALWLYAALLLATMIWGVWEVGFDFWALTPRSDILVFFGI
                     WLILPFVWHRLVVPS"
BASE COUNT         4221 a         4102 c         3801 g         3697 t
ORIGIN      
        1 gcgcttggca gtaatctggc ctctccgctg gagcaggtca atgccgccct gaaggctatc
       61 gccgacattc ccgatagccg tatcgtcgcg gtttcttcgt tttaccgcac gccgccgctt
      121 ggcccacagg atcagcccga ttacctgaac gctgcggtgg cgctggatac cgctctcgcc
      181 cccgaagaat tgcttaacca tacccagcgc attgagctgc aacagggccg ggtgcgcaag
      241 gccgaacgct gggggccgcg cacgctggat ctcgacatta tgctgtttgg cgatgaagtc
      301 attaacaccg accgtctgac cgtgccgcac tacgacatga aaaaccgcgg ttttatgctg
      361 tggccgttat tcgaaatcgc tccggagctg gtgtttcccg acgataaagg tctgctgatc
      421 gagctgatgt cccaaatgtc tccctgtccc gatcgttggt aagaaatacc cctattatca
      481 attcaacaaa tagtttctat gctgttattc cgtataatta gataaattaa atactcttgt
      541 tagaaataat catggaacca gtcgtatatt atataacata gtaacaaacc atatatttca
      601 gctatccgtt taaaaaacag ccgcttaatg caattaaaca tacacaccat gaataacact
      661 attaataaca caatgaataa aatgtcagaa tatccttaaa tataatcaga ggtaattcat
      721 cgcaaaaaac aataaataat aaataataaa tattatacaa aaattatcct caaacgctaa
      781 aatccaagcc ctgctattta atataaatta atagatattt aatttattaa catttcaatc
      841 ctgtaaggat acagcaatga aaaaagcgat tttagctgcc gcaatggtta tggctatggg
      901 ttctacttcc gcaatggcag ttgaaggcgg ccagatcgaa ttccacggtt tagtgagcgc
      961 aacaacctgt tctaaagtag tttcctcttc acgcggtaat caagcgactg atggtgacgt
     1021 atatctgact acagcagccc caggcgatat cactgaaggc gttgctgcta acgcatacgg
     1081 cgcgcttccg gctccgttct ctatcatcct ggattgctca ggcgcggctg atgtaactga
     1141 tgccactaag gcttctctgg taatggattc gtcattctct aacactaccg gcactcttga
     1201 caatgacacc acactgtccg tggctggtga aactggggct gaaaacgtga atatcgccat
     1261 ccatgatgcc gataccaaaa ctcaggttaa aatcgatggc gctgaaattc atgaagcgtc
     1321 cttcaaaaac aaagttgcaa cctataactt tatggcgtct tacgttcgtg ccgatgcttc
     1381 taaagaagtg actaccggtc atgtaaccac gaacgcaatg tataccttta cttaccagta
     1441 acaggacata cggttatcac taataagtac tcgtaccttt ccttgagtta gcgtgcttat
     1501 cagttattga tctcatataa ccttcggggt ccaggaatta tttcaacgat tccgggggtt
     1561 cattcaattt aattaaattc aaagttgatt tcattatctt ctacaggcaa ggaacgctta
     1621 tgttgtatgt aaaaaaaagc ctgaccgcca tcgtattagc cagtgctgta tttagtacct
     1681 ttagctatgc ggatattatt atctcgggca ccagaatcgt ttatgacgaa aataaaaaag
     1741 acgtcagtat acgactggaa aataagggta cccgcccatt attagtccaa aactggatag
     1801 acctgggtaa cgataacgac gatcccggga gtattaaagc gcctttcgtt tctacccccc
     1861 cggtttcacg cgttgagcct aaacgtgggc aatcggtaaa aattatgtat acccaggcca
     1921 gcgcgctgcc gaaagaccgg gaaagcgtct tctggtttaa cgtactggaa gtaccgccaa
     1981 aagcggatac cagcaaagaa gagaataaaa gcttactgca actggctttt cgtacccgta
     2041 tcaaactgtt ctatcgccca acaggactaa aaggccagcc tgctgaagcg gcaaaacaac
     2101 tgaagtggca aatagcgagc gaacaaggct acgcggtact acgtgctgat aactcaactc
     2161 cgtatttcgt ctcatttaat gacgctacct acactgcagg cggtaaacgt tatgacgttg
     2221 aagccaccat ggttgcgcct ttcagtaaat catccttcac cgtgaaaggc ttgtcaggcg
     2281 ctagcgccgg aaaactggag tatcacgcca ttaatgattt tggcggtttg attgaaggtt
     2341 ccgtatcgct gtaacggatt aaccaagaat caggatgaag aaatcggtgt aaaactttcc
     2401 acattccaag gccatgccga agaaaacgat gctcgcagtt tgctgtgcgc tattttatag
     2461 ccagagcagt atttccgctg aaagcgttga atacgacagt tcctttttaa tggggagtag
     2521 cgcctccaca atcgatatca gcaaatactc cgacggcaac ccaacgcctg tcggaacgta
     2581 tagcgtgaaa gtttttgtca acgaaaaccc cgtatcaagc ctgtccatac cctttatcga
     2641 tatcggcaag gtcagtgcag aagcctgcct gacacaaaaa aatctggcgc agttgcatat
     2701 caaacagcca gaaatcaatg cgaccaatca aattctgaaa aaaggggagg aagaagatca
     2761 agattgtctg aaccttcccg tcgccatcgc gcattcagag gtcaattttg atatgggcga
     2821 acagcgtctg gatattaccg tacctcaggc gtggctcatt gaaggttatg acggctatgt
     2881 tgagccttcg ctgtgggaag atggtattcc ggcagcgctt ctgtcctact cggctaacgg
     2941 ctatcacagc accaatggca gcgccgataa tgacagtatg tatgcggcgt ttaacaccgg
     3001 tattaacctc ggcgcatggc gttttcgcgc caacggcaac tataactgga cgaaagactc
     3061 aggaagctcc tttgactatc agaatcgcta cttgcagcgc gatctgcctt caatgcgctc
     3121 tcaacttgtt gtcggtgaaa cctataccac gggcgaaaca tttgactccg taagcattcg
     3181 cggggctcgt ctgtatagcg acaaccgaat gctaccttcg cagcttgcca actatgcgcc
     3241 gattattcgc ggcgtagcaa acagtaacgc caaggtcagc ataacccagg gcggctacaa
     3301 aatttatgag tccacggtac cgccaggccc ctttgaaatc agcgacatca gtccttccgg
     3361 ctacggtagc gacctcatcg tcaccgttga ggaggccgac ggcagtaaac gcacctttag
     3421 ccagccattc tcctcggtta tgcagatgca gcgcccgggc gtcggacgtt gggatttcag
     3481 cgccggtgaa gtgaatgacg atgagcttca tgacaagccc tatatggcgc aaggttcata
     3541 ttactacggc cttaataact ttttgaccct ctatacaggt gttcagggaa cagataataa
     3601 ctatcttgcc gggttgctgg gtgtcggcct caacacccct cttggcgcat ttgcacttga
     3661 tgtcactcag tctcgtacag agatccctga ggataaaacc tataagggcc agagctaccg
     3721 actgacgtgg aacaagctga ttgaaccgac ggcaacctcc tttaacgtag cggcatatcg
     3781 ttattcaacg caggactacc tgggcctgaa tgatgcgcta cagctgattg atgacgcgaa
     3841 acataaagac gcggacgatc gcaacaccat gcttaactat tcgcgcatga aaaaccaggt
     3901 cacggtcagc ataaaccaac cgttgaggtt taaggaagtc gactacggtt cctttttcct
     3961 ctcaggctcc tggaccgact actgggctac caatgaaagc cgtaccgact atagcctcgg
     4021 ttacggaaga ggtttttcgt ggggcagcct cagtatcaac ctccagagat cctgggatga
     4081 agatggcgaa aaagatgatt cgctctatat caacttcaac gttccgctgg agaatctgct
     4141 gggcggcggt cgccgtaagt cgggtttcag ctcactgacg gcgcaaatgc gcactgattt
     4201 tgacggcggg taccagttga gcatgaacag caacggcagc agtgaagacc acacgctgaa
     4261 ctacagcgtt aacaccggct acaccatgca gaaaaatgaa aagaacatca ccgatgtcag
     4321 cggctacgcc agctatcagt ccccctgggg agatgttact gcttcagcct ctgccaataa
     4381 tgacagcagc cgacaatatt cgctcgccac aaccggagac tttgtcctgc atggcggtgg
     4441 agtgacgttc actaacgata acttcggtaa tagcgatgcc atcgtgctgg taaaagcccc
     4501 tggcgcgaaa ggcgcgcgca tcaatggcgg caacagcacc atcgatcgct ggggctacgg
     4561 cgcgacgaac tcgctttccg cctacagaga aaaccaggtc aatattgata tcgacacgct
     4621 ggaaaacgat gtcgaactaa agagcaccag tacaaccctg ataccgcgtg atggcgcggt
     4681 agtcttagcc agtttcgaaa ctgaccaggg acgctcggtc attctcaaca tgtcccgtaa
     4741 tgacggaaaa gccctaccat ttggcgcaga agtctacgag aacgatgtgc agatcgacaa
     4801 catgggccag ggcggtcagg cttttgttcg cggcatcagc gatgcaggcg aactctcagt
     4861 acgctggttt gaagaaaacc agccagcaac ttgtttagca acctttgcgt tgccggcaac
     4921 gcaacaaacg gtagggtcca gccagacctt actgttagac cacataacct gtcgtgttaa
     4981 taaccttaaa tcaaatggaa tagacaatga aaaggaataa atacctttta gcagcctctg
     5041 tgctcgccgt gatatttccg cttaccagtc aggcggaaaa tatcaacgtc gactttaccg
     5101 ccaccgtgtt agccacgacc tgcagcatgt caattgcggc gttagatggc tcgaacttat
     5161 cgggtgatgc caccagcggc tatacgctga acgtcggcga tgtcgggttg gataaaatta
     5221 taaaaaaatc agcggaatcg cagaaaaact ttaagtttgt cgcgaaggat tgcagtgccg
     5281 ctctgaccaa aatcaccacc acgcttgcca gctccacaga tgccagcggc aattttatca
     5341 aaaaccaatc agcggcaagc ggcgctgcca ccaatgttgg catgggcttt aagcgcaaaa
     5401 gcactaccga tgaaacctat ttcacgcccg gctcaggctc atttagctgg acttccgacg
     5461 agcgcgcagc aaacgaagtg gaaatgacgg tcgcgctgcg tgaactgacc gacggcgcgg
     5521 gtaccacagg tgctttcagc tcaaccgcta cgtttaactt cacttatcaa taacaaggac
     5581 gatgataatg aaaaagcaaa tattgcgcgt cgtgattttt agctcgctga ttgccacggg
     5641 agctggcata tcaacgatga catatgccga tggaaccaac agtctggacc tgaccgtgaa
     5701 cgccaatatc actgcgggta cgtgttctgc atccgtggtt gaaggtgata ccattaccga
     5761 tactatcgct tttggcaacg tttacatttc tgaagtatat gcaaaaagta aaataaaact
     5821 tttcaagtta cggttcagtg attgtgtcgg tctcaaagat aaaaaagcta agttcagact
     5881 agccccaaat aatgtagcat gcccggggag cagcggcact gatgggcaat tcgcaaatgc
     5941 ctcgacttca acaacaaagg cagcaatggt cgccatggaa gtatggacga cagaaacccc
     6001 tggaggcact ggcgcggtaa aacttcactg ctggtcgaaa ccagaacaaa ccgtggattt
     6061 atctggtgca agtgtaacaa cgcctgttga ttttccttta agcgctatga tggtcgctca
     6121 aagcggcggt acgcttcaaa atatgacagc gggagatttc tactcgccca ccaccttcac
     6181 catcacttac cagtaatggt gataccaatg agacgtttgc gcgaacccac gctcgccacg
     6241 ttattttcag ggctggcaac agccctgttt agcgcgacgc tgtacgccga taccaatgtg
     6301 aatttcaccg ccagcgtgca gaaggacacc tgccagataa agatagatgg caatggaacg
     6361 gtaaacttcg ccaccatagc gcccgcctat tttgccgatg gcattaccgc ggaaaccgat
     6421 tatgaggggg ggaaagagtt caccattaag cttatttctt gcccgatcag tgatggtaaa
     6481 ataaccaatg tcacctttaa tttcgcacca ctaaacgggc agttctcacc tgagaatcaa
     6541 caagtttttc ctaatgacat cgctaccgat gctggtggcg tagacaatgt cggcgtggtg
     6601 attttcacca ccgattcacc acgcaccaac gtgcttaata cggatggttc atcgcgggcg
     6661 acttttgctg ccagcaccta cagcgacacc gtctggacct tttactccag aatgcaaaaa
     6721 atacgcagtg ccgaaaaagt gacgaccggt gaacttagca gccgtgtact ggtgaatgtc
     6781 tcctatgaat aatcaggaga ttttattaaa cgaaaggata tcgttaatat gcttttaaaa
     6841 aacacaacat ggtttgccgc ctttttcctg atgatggcta tcatgtccaa ctgttatgcc
     6901 ataaatacta ccctggccgt tggcgactac gcctccagtg aacatgatgg cccaagcggg
     6961 gattcggtat tcactgataa cagccacaat tttgggcaga ccatcgcgat tcataaggaa
     7021 acggcgctgc gccagattac cgtttttaac tggtccggca tccagtacgt tatggagatg
     7081 ttctgtaacg gcagcggcaa ccacacctac cttcaactga cccataatta tatctctgct
     7141 ggcaaaagct ataatggaca tccgctgtat aaaacctcaa ttcccggttt ttatttcacc
     7201 attgagatga ccttccttca gccagcagag aatatgacct caagcacctt ctggtttgat
     7261 aagacctcaa cgccgatcac cagcgagttc acggaatttc cgtcagcctg ctccagaaca
     7321 aatgtttata gcaaccttgg caaattaatg tatggcctga aaatctatgc ctatgtcgac
     7381 tctgacttcg cgccgacgga agcccagctt caaagcttta cgctgtctaa aaacggcgac
     7441 tccgatttct acattgataa cccgggcagc ggattatcaa actataaaat gaagtttaac
     7501 ctcgccgcca caggacttaa ggccgtctgg ccaacctgct cggccagcac cattagcggc
     7561 accaatgttt cgggatcaac ggttaagctg ggtagctttt atccaaagca gattatggaa
     7621 gggctgtcgc cgaccaagtt ccagatcaat ctctcctcct gccagtacat caataatatt
     7681 gaagttaaat tggccagtaa taatgtcggg acgaaaaaca cctcgctact aaccaacaat
     7741 tcaaccagca acacgaaagc cagcggcatt ggcgttttaa ttgaaggttt gaaaagtagt
     7801 tcgagcgccc agatggtact caaacctaac gactcaagct caatttataa agataccacc
     7861 aataacaccg gagacggcag cccggtagga agcgcgacaa aatcgttgta tttccaggca
     7921 accttaaagc ccgatggtga caatccaaca atcaatccag gtgatttcaa agccaccgct
     7981 caattttcaa tcacctatcc gtaaaatcct ataacgaacc gcaacgcaat ttgcccagaa
     8041 aaggctaacg cttgcggttc tcttccccta caatgcggcc attctattca tcaatattat
     8101 ggccggagag gttatgagca aacccactac tatcgctgtg ctgcagaaat gcaaacaaga
     8161 gaaaaagcgc ttcgccacca ttaccgcgta cgattacagc ttcgccaaac tcttcgccga
     8221 tgaaggcatc aatgtgatgc tggttggcga ctcgctgggc atgacaattc aggggcacga
     8281 ctccaccctg cctgtcaccg tggaagatat cgcctaccac acccgcgcgg tacgccgcgg
     8341 cgcgccgaac tgcctgctgc tctccgacct gccgtttatg gcttacgcca cgccggaaca
     8401 ggcgtttgaa aacgcggcta tcgtgatgcg tgcgggggcc aacatggtca aaatcgaagg
     8461 cggcgcatgg ttggttgata cggtgaaaat gctcaccgaa cgcgccgtgc cggtgtgtgg
     8521 ccatctggga ttaactcccc agtcggtgaa tatcttcggc ggctataaaa ttcagggccg
     8581 cggcgatgcc gggcagatac tgctggatga tgcgctggcc ttagaagcag cgggcgctca
     8641 actgctggtg ctggagtgcg tgccggttga actggcgaag cgcgtcacgg aagcgctgtc
     8701 gattccggtg atcggcatcg gcgcgggcaa cgtcaccgac ggtcagatcc tggtgatgca
     8761 cgatgcgttt ggcatcaccg gcggtcatat tccaaaattc gcgaaaaatt tccttgccga
     8821 ggcgggcgac atgcgcgccg ccgtacggca gtatatggca gaagtggagt ccggcgttta
     8881 tccgggcgaa gaacacagct ttcactaatt tttctgaccg tgccggatag cgacgcgacg
     8941 cgtcttatcc ggcctacaga tcctcaacgg atgtaggcct gataagcgca gcgccatcgg
     9001 gctggatcat caagcaactc aaggagtctt gttgtgttaa tcattgaaac cctgccgctg
     9061 ctgcgccagc atattcgccg tctgcgtcag gaaggcaaac gcgtcgcact ggttcccact
     9121 atgggcaacc tgcacgacgg ccatatgaag ctggtcgatg aggcaaaagc ccgggccgat
     9181 gtggtcatcg tcagcatttt cgtcaacccg atgcaatttg atcggccgga cgatctggtg
     9241 cgctatccgc gcacgttgca ggaagattgt gaaaagctga acaaacgcaa agtcgattat
     9301 gtctttgccc cagccgttga ggaaatctac cctcaggggc tggaaggaca gacatacgtt
     9361 gacgttcccg gcctctctac catgctggaa ggcaccagcc gtccgggcca cttccgcggc
     9421 gtctcgacca tcgtcagcaa gctgttcaac cttatccagc cggatatcgc ctgctttggc
     9481 gagaaagatt tccagcagct ggcgctgatc cgcaaaatgg tggcggatat gggttatgac
     9541 attgagatcg tcggtgtgcc gattattcgc gctaaagacg gtctggcgct cagctcacgt
     9601 aacgcttatc tgactgcaga gcagcgcaaa attgcgccgg gtctatacaa cgtgatgaat
     9661 agcatcgctg aaaaactgat tgcgggtaat cgtgagctgc aagagattat tgccattgcc
     9721 gagcaggaac tgaatgaaaa aggcttccgt gccgacgaca ttcaaatccg tgatgccgac
     9781 acgctgctgg agctgacgga aaccagcaaa cgcgcagtga ttctggctgc cgcctggctg
     9841 ggacaggcgc gtctgatcga taatcaaagc gttacattag cccagtagac aggggttaaa
     9901 aatcgggcaa tactgcctga gaatttccaa agcaggctac aagcgcctgc ttagccaaga
     9961 taaacgacag ggtatagaag ttatgattcg caccatgctg caaggcaagc tccaccgcgt
    10021 aaaagtcacg caggcggacc tgcactacga aggctcctgc gccattgacc aggatttcct
    10081 tgatgcctcc ggtattctgg aaaacgaagc gattgatatc tggaacgtga ccaatgggaa
    10141 acgtttctca acctatgcga ttgcggctga acgcggctcc agaatcatct cggtgaacgg
    10201 tgcggcggcg cactgcgctg aagttggcga cattgtgatt atcgccagct tcgtcaccat
    10261 gtctgatgaa gaagcgcgta catggcgtcc gaaagtggcc tactttgaag gcgacaacga
    10321 aatgaagcgc accgcgaaag ccattccggt tcaggttgcc tgatagtcct tacccctgcg
    10381 gctgattgac tatcagccgc gacatcgttt ccagcgaatc cgtgcgtaaa atatacagcc
    10441 ttttgagcag catcggatta tctcccggct tcaccttccc tctcaccgtg gtgaccgcca
    10501 gatggaaacc ggcgtctttt gctgctttga tcgcggtcgc gttatagccg ccaaagggat
    10561 aagaaagata aaatacgtgc ggagtaaact gtgtgagcgc ccgccgcgaa cgttcaaaat
    10621 caaacagaat attatggtaa ctgcggctat ataaaatcgg gcggcgatgc ccgtctaccc
    10681 ggtgtaaaaa atgggtatgc gactgaaaat caaaaacatc gcttatcttg cgcaattcgg
    10741 acacgctcat aaattgcagc gacctgggat tccatttttg cggatggcgc ttaatacgcg
    10801 atgagataat aaatgccgtc gctttcatat cgtactgctt taataccgga tatgcatagc
    10861 gactcaccga tttaaggcca tcatcaaagg tgatagccac cgcgcgcgcc gggaaattag
    10921 cgcggttata gatgtaatcc tccagttggt acatcgtcaa cgtggcatag ccgcgatcgc
    10981 gaagccaggt catttggttg ctgaatgccc gaaccgaagt cgtggtggag gtatggcgaa
    11041 aacgggtatt ctcttcatca cgtaaaatgt gatgataggt caaaatcgga atgccgttgt
    11101 cttcctgcgc atccatggcg ttgacataag ccagcctgtc gccaatacgg atctgattcc
    11161 aggtttgatg tagccggcct ttcagcttgc taataatggg gtaacgcaaa ttatccacca
    11221 atacgccaaa cggggcgcta ctgatgtccg gcgcgttata caccggcgtg tccttccagg
    11281 tcaccagatt ctgattgctg agcggcttgt taagatcgcc cagcccatct tccacttttt
    11341 gttttccctg cacgggtccc agatggcctt tatcgataaa ccccacaccg aagccaaatt
    11401 taaaggcata ataatcaacc gcaacaggcg ttacggaaag aatttgtccg gcgcggatat
    11461 tccctacggt caccattttg tcgccaatct gcgaccagat ggcggcatct ttcgtcgttt
    11521 gcatataacg agcgggcaag gcagccaaca cattaccggc gaaaaagaac agcaagataa
    11581 gaacaacacg cataaccata tatcataacc gaggcgaaaa aacgccgtta ttgtagcaaa
    11641 agcgtcgtca atggtattga tcaaaactca tacaaatcat gcagcaatac aaaaggcgga
    11701 tttttctgct gctgatgcca gagactggtg acatccggcg cgccaagcgc gacaatctgg
    11761 tcacgaaatg ctgaactgct catcgactct cgcaaaggaa tcatttcctc tatcaatgaa
    11821 tagctaatgc ctgaaataac ttcacattga ggatgtttat ggctcatcag cgacgctaca
    11881 cgataaggcg ccgcgccgga aatgtcggtt aaaaatatca cgccttcacc ggaatcggtg
    11941 gcatggaggg catcacacat catgcggctc agcatgtttg agctcagacc gcgccaaaaa
    12001 ttgaccgccc ggcattgcgc cagcggacca ttttttctct ccaggcgatc aagcatatcc
    12061 tgtgcacgat cgtcatggca ggtaatcacc caacctaaca taacctacct ccttagcagg
    12121 caagtagttt atcagggtga tcaatcggga atgatgacag ccgtcaaaag tctcctcttc
    12181 cctccaggag aagaggagaa tcgtatcagc tacgcaaacc gcgtccgcgc tggatcagcg
    12241 accaacacag cagatagaaa gtagcgataa agatcaccag tacgccaaac gttgtcacca
    12301 gcggcacatc atggataccc agaaaaccat aacggaaacc gctgatcatg tagacgatcg
    12361 ggttcaggtg cgacaaccct tgccagaacg gcggcagcag cgtcagcgag taaaataccc
    12421 cgccgaggta ggtcagcggc gtcagcacaa aggtcgggat cagactgata tcgtcaaagg
    12481 ttttggcaaa cacggcgttc agcagtccgg ccagcgagaa cagaatcgcg gtcagaatca
    12541 gcgttagcgc gacaaatacc caggaatgca cctggaaagg cacgaaaaag agcgaaatcg
    12601 ccgtcaccag aatccccacg cacagcccgc gcgccacgcc gccgccgaca aatccggcga
    12661 tgatcacgtg cgttggcacc ggcgcgacca gcagttcctc aatattgcgc tgaaacttgg
    12721 cgctaaagaa cgaggaggcc acattggcgt aggagttagt aatgaccgcc atcataatca
    12781 ggcccggcac aataaattgc atatagctaa agccatgcat ttcgccgatg cgcgaaccga
    12841 tcaggttacc gaaaataata aaatagagcg tcatggtgat gacaggcggc accagcgttt
    12901 gcacccagat ccgcataaag cggtggatct ctttcgccca gatgctttta agggcaaccc
    12961 agtaaagctg catcatgcgc gatctccttg tttttcatgc accagcgaca caaacagttc
    13021 ttccagacgg ttggctttat tacgcatact taatacctga accccctgct cgctcagttg
    13081 gctaaagacg ctgttaaccc cctgctcgcg taacacttcc acctccagag tcgaggtatc
    13141 caccagacga tattgataac ccgtaagctt aggtagcggg cttttgggcg ctaaatccag
    13201 aataaatgtc tccgatttca gctttgaaag cagatttttc atggaagtat tttccaccag
    13261 ctcgccgtgc tgaataatac cgatattgcg gcacagcatt tccgcctctt ccagatagtg
    13321 ggtggtgaga ataatggtgg tgcctttggc gtttaagtct ttcaggaacc cccacattga
    13381 gcgacgtaat tcgatatcga cgcccgccgt cggctcgtcg agaatcaata gtttaggctc
    13441 atgcatcaat gcgcgggcga tcatcaggcg gcgtttcatc ccaccggaca gcatccgcgc
    13501 gcgttcatga cgtttttccc acagatcgag ctgttttaaa tacttttcgc tacgtaaaac
    13561 cgcctcttta tgctccacgc cgtaataacc cgcctgattc actacgatct gttgcaccgt
    13621 ttcaaacggg ttaaagttaa actcctgtga caccagtcca agctgtcgct tggcgttaac
    13681 cacgtctttt tccaggtcgt aaccaaaaac gttaacgcgc ccggacgttt tattaaccaa
    13741 tgagctgata ataccgatgg tggtcgattt ccctgctcca tttggcccca gaagcgcgta
    13801 aaaatccccc gcttcgacct gcaaatctat gccgcgcagc gcctgaacgc cgccgggata
    13861 ggttttttta agttgttgaa gttccagcgc aatggtcata aattctcact tactttacgt
    13921 tcttacactt tatatatggt ttaaataatt acggagttgc cctatattag cccaacgcac
    13981 ttatttggtt acaggtcgtt aacttccatg aaagacatag atacactcat cagcaacaat
    14041 gcactatggt caaaaatgct ggtggaagag gaccccggat tttttgagaa actggcgcaa
    14101 gcgcaaaaac cgcgctttct atggattgga tgttccgaca gccgcgttcc cgcagagcgt
    14161 ttaaccgggc ttgaaccggg cgaattgttt gttcaccgta atgtggctaa cctggttatt
    14221 cacaccgatc tgaactgtct ctccgtggtt cagtatgcgg tagatgctct ggaagttgag
    14281 catattatca tttgcggcca ctccggttgc ggcggtatca aggctgcggt agaaaaccct
    14341 gagctgggct tgattaataa ctggctgctg catatccgcg acatctggct taaacatagc
    14401 tcgctgttgg gaaaaatgcc cgaagagcaa cgtctggacg cgctctatga attgaacgtc
    14461 atggagcagg tctataacct ggggcattcc accattatgc agtcagcgtg gaaacgcggg
    14521 cagaatgtga ccattcacgg ctgggcgtac agtatcaatg atggcctgct gcgcgatctt
    14581 gacgtcaccg ccaccaacag agaaacgctg gagaacggct atcataaggg tatctccgcc
    14641 ctaagtctga aatacattcc ccaccaataa gccattagct ataggccgga taagtcgctt
    14701 tagcgacgcc atccggcatt tctgcgctta ctcgtccagc agcaccactt taccaacata
    14761 cggtagatgg cgataacgct gggcgtagtc gataccgtaa ccgactacaa attcgtccgg
    14821 aatcgaaaag ccaacgaact caaccggcac gtccacttct cggcgagacg gcttatccag
    14881 cagcgtacaa atcgccagcg atttcggctc gcgcaggccc aggatttcac ggaccttcga
    14941 cagcgtatta ccggaatcaa taatgtcttc gacaatcagc acgtctttac cacgaatatc
    15001 ctcatccaga tctttgagga ttttcacgtc gcgggtggtg gacataccgc taccataact
    15061 ggaggcggtc ataaaatcga cttcatgagg aacctgaact tcacggcaca ggtccgccat
    15121 aaacataaat gagccacgca acagacctac cagcaccatt tcactgtcgc tgtctttata
    15181 acgttcggta atctgacgac ccagctcggc aatacgtgct ttgatctccg cttcggggat
    15241 catgacttca acagtatgtt tcatatttat aaccatatga tttaaaaaca aatcactcaa
    15301 tgccggtgac taataacgcc gcattgacgc gcaaggcacg cagtataaca gcaaacgtat
    15361 tcattcgcgg catttgataa gaaagctcat tttgtgatga cgatcacaca tgttaattcc
    15421 tatgcttaat tgctactaaa aaattaacaa tttgggatgg tgtcttttta tggcagaaaa
    15481 taacgcacga tcgccacgat tactcgtgac gctgacggcc ctctttgcag cactttgcgg
    15541 gctgtatctt cttatcggag gtgtctggct ggttgctatt ggcggttcct ggtactaccc
    15601 catcgcgggc ctcgtgatgc tggttgtggc cggattgcta tggcgcagta aacgtgccgc
    15661 actgtggctg tatgccgccc tgctgctggc gacaatgatt tggggcgtgt gggaagtcgg
    15721 gttcgacttc tgggcactca cgccgcgtag cgatatcctg gtgtttttcg gcatctggct
    15781 aatattgccg tttgtctggc atcggctggt ggttccttcc a
//
LOCUS       DAGWFR010000087        15734 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.089, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000087 DAGWFR010000000
VERSION     DAGWFR010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 15734)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15734)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15734
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.089"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..161
                     /locus_tag="MOX77_002806"
     CDS             <1..161
                     /locus_tag="MOX77_002806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HCA3358284.1"
                     /translation="LSQQFSVPGRVIQNGAVWRIQLGPFASKAEASALQQRLQTEAQL
                     QSFIASAQ"
     gene            300..1511
                     /gene="dacA"
                     /locus_tag="MOX77_002807"
     CDS             300..1511
                     /gene="dacA"
                     /locus_tag="MOX77_002807"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase DacA"
                     /protein_id="HCA3358285.1"
                     /translation="MKTTFSARFMQRMALTTALCATFISTAHADDLNIKTMIPGVPQI
                     DAESYILIDYNSGKVLAEQNADERRDPASLTKMMTSYVIGQAMKAGKFKETDLVTVGN
                     DAWATGNPVFKGSSLMFLKPGMQVPVSQLIRGINLQSGNDACVAMADFAAGSQDAFVG
                     LMNSYVNALGLKNTHFQTVHGLDADGQYSSARDMALIGQALIRDVPNEYAVYKEKEFT
                     FNGIRQLNRNGLLWDNSLNVDGIKTGHTSKAGYNLVASATEGQMRLISAVMGGRTYKG
                     RETESKKLLTWGFRFFETVNPLKAGKEFASEPAWFGNTDRASLGVDKDVYLTIPRGRM
                     KDLKASYVLNTAELHAPLQKNQVVGTINFQLDGKTIEQRPLVVLQEIPEGNFFGKIID
                     YIKLMFHHWFG"
     gene            1619..1882
                     /locus_tag="MOX77_002808"
     CDS             1619..1882
                     /locus_tag="MOX77_002808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbeD family protein"
                     /protein_id="HCA3358286.1"
                     /translation="MKTKLNELLEFPTPFTYKVMGQALPELVDQVVEVVQRHAPGDYS
                     PTVKPSSKGNYHSVSITINATHIEQVETLYEELGNIDIVRMVL"
     gene            1982..2623
                     /gene="lipB"
                     /locus_tag="MOX77_002809"
     CDS             1982..2623
                     /gene="lipB"
                     /locus_tag="MOX77_002809"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000284017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HCA3358287.1"
                     /translation="MYQDKILVRQLGLQPYEAISQAMHNFTDMRDENSHDEIWLVEHY
                     PVFTQGQAGKAEHILMPGDIPVVQSDRGGQVTYHGPGQQVMYVLLNLKRRKLGVRDLV
                     TLLEQTVVNTLAEMGIEAHPRADAPGVYVGEKKICSLGLRIRRGCSFHGLALNVNMDL
                     SPFLRINPCGYAGMEMAKITQWKEDATTDNIAPRLLANILALLNNPPYEYIAT"
     gene            2925..3878
                     /locus_tag="MOX77_002810"
     CDS             2925..3878
                     /locus_tag="MOX77_002810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator"
                     /protein_id="HCA3358288.1"
                     /translation="MSDNNQAERQPADQHLQDKPQIFRTLRNIDLNLLTIFEAVYVHK
                     GIVNAAKILNLTPSAISQSIQKLRTIFPDPLFIRKGQGVTPTTYATHLHEYISQGLES
                     ILGALDLTGSYDKQRTITIGTTPSVGALVMPIIYQAIRPRYPQLLLRNIPVDDAESQL
                     SQFQTDLIINTHSYNNRSIQHHVLFSDTLEIVCRQHHPCLANAITEERLNSADHTFLM
                     LEGQHLSLLRQRLQETFPDQQISFSSYNIFTIASLIASSDLLGLMPTRFYDLFSRCWP
                     LERLPYAPVNSEQVEFSLHYNKLSLRDPVLENVIDIIREAF"
     gene            4084..5049
                     /gene="lipA"
                     /locus_tag="MOX77_002811"
     CDS             4084..5049
                     /gene="lipA"
                     /locus_tag="MOX77_002811"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HCA3358289.1"
                     /translation="MSKPIVMERGVKYRDADKMALIPVKNVVTERDALLRKPEWMKIK
                     LPADSTRIQGIKAAMRKNGLHSVCEEASCPNLAECFNHGTATFMILGAICTRRCPFCD
                     VAHGRPVAPDAEEPQKLAQTIADMALRYVVITSVDRDDLRDGGAQHFADCITAIRAKS
                     PEIKIETLVPDFRGRMDRALDILNATPPDVFNHNLENVPRIYRQVRPGADYNWSLKLL
                     ERFKEAHPEIPTKSGLMVGLGETNAEIIEVMRDLRRHGVTMLTLGQYLQPSRHHLPVQ
                     RYVSPEEFDEMKAEALAMGFTHAACGPFVRSSYHADLQAKGMEVK"
     gene            complement(5136..5339)
                     /gene="tatE"
                     /locus_tag="MOX77_002812"
     CDS             complement(5136..5339)
                     /gene="tatE"
                     /locus_tag="MOX77_002812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatE"
                     /protein_id="HCA3358290.1"
                     /translation="MGEISITKLLVVAALVVLLFGTKKLRTLGGDLGTAIKGFKKAMN
                     DEDAGVKKDVDGSVQAEKLSHKE"
     gene            complement(5467..6254)
                     /locus_tag="MOX77_002813"
                     /pseudo
     CDS             complement(5467..6254)
                     /locus_tag="MOX77_002813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003022696.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="deaminated glutathione amidase"
     gene            6345..6728
                     /gene="crcB"
                     /locus_tag="MOX77_002814"
     CDS             6345..6728
                     /gene="crcB"
                     /locus_tag="MOX77_002814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HCA3358291.1"
                     /translation="MLQLLLAVFIGGGTGSVARWMLSMRFNPLHQAIPIGTLTANLLG
                     AFIIGMGFAWFNRMTHIDPMWKVLITTGFCGGLTTFSTFSAEVVFLLQEGRFGWALLN
                     VLINLLGSFAMTALAFWLFSAAAAR"
     gene            complement(6786..6995)
                     /gene="cspE"
                     /locus_tag="MOX77_002815"
                     /gene_synonym="gicA"
                     /gene_synonym="msmC"
     CDS             complement(6786..6995)
                     /gene="cspE"
                     /locus_tag="MOX77_002815"
                     /gene_synonym="gicA"
                     /gene_synonym="msmC"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antiterminator/RNA stability
                     regulator CspE"
                     /protein_id="HCA3358292.1"
                     /translation="MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTL
                     AEGQRVEFEITNGAKGPSAANVTAL"
     gene            complement(7183..7755)
                     /gene="pagP"
                     /locus_tag="MOX77_002816"
     CDS             complement(7183..7755)
                     /gene="pagP"
                     /locus_tag="MOX77_002816"
                     /EC_number="2.3.1.251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid IV(A) palmitoyltransferase PagP"
                     /protein_id="HCA3358293.1"
                     /translation="MYVAMIIRKYFLIIALLVMPWLAIPSVSAADKGWFNTFTDNVAE
                     TWRQPEYYDLYVPAITWHARFAYDKEKTDRYNERPWGVGFGQSRWDDKGNWHGLYMMA
                     FKDSFNKWEPIGGYGWEKTWRPLEDDNFRLGLGFTAGVTARDNWNYIPIPVLLPLASI
                     GYGPATFQMTYIPGSYNNGNVYFAWMRFQF"
     gene            8134..9519
                     /gene="dcuC"
                     /locus_tag="MOX77_002817"
     CDS             8134..9519
                     /gene="dcuC"
                     /locus_tag="MOX77_002817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter DcuC"
                     /protein_id="HCA3358294.1"
                     /translation="MLTVIELLIGVVVIVGVARYIIKGYSATGVLFVGGLVLLIISAL
                     MGHKVLPASETSTGYTATDIVEYIKILLMSRGGDLGMMIMMLCGFAAYMTHIGANDMV
                     VKLASKPLQYINSPYLLMIAAYFVACLMSLAVSSATGLGVLLMATLFPVMVNVGISRG
                     AAAAICASPAAIILSPTSGDVVLAAKAAEMPLIDFAFKTTLPISIAAIIGMAIAHFFW
                     QRYLDKKENISHEMLDVAEITTTAPAFYALLPFTPIIGVLIFDGKWGPQLHIITILVI
                     CMLLAAVLEFVRGFNTQNVFSGLEVAYRGMADAFAGVVMLLVAAGVFAQGLSTIGFIQ
                     SLISIATSFGSASIILMLVLVILTMLAAMTTGSGNAPFYAFVEMIPKLAHSSGINPAY
                     LSIPMLQASNLGRTISPVSGVVVAVAGMAKISPFEVVKRTSVPVIVGLLIVIIATEIM
                     VPGASSAVTGG"
     gene            complement(9573..10253)
                     /gene="dpiA"
                     /locus_tag="MOX77_002818"
                     /gene_synonym="citB"
     CDS             complement(9573..10253)
                     /gene="dpiA"
                     /locus_tag="MOX77_002818"
                     /gene_synonym="citB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component response regulator DpiA"
                     /protein_id="HCA3358295.1"
                     /translation="MTEPLTLLIVEDETLLAEMHAEYIRHIPGFNQIWLAGNLAQARM
                     MIDRFKPGLILLDNYLPDGKGITLLHELMQSRYPGGVVFTTAASDMETVAEAVRSGAF
                     DYLVKPIAYERLGQTLTRYQQRRRMLASADSASQKQIDEMFNAYARGEPKGDLPTGID
                     ALTLNAVMKLFADPTVRHTAETVAQALTISRTTSRRYLEYCASRHLIVAEIIHGKVGR
                     PQRIYHGG"
     gene            complement(10222..11883)
                     /gene="dpiB"
                     /locus_tag="MOX77_002819"
     CDS             complement(10222..11883)
                     /gene="dpiB"
                     /locus_tag="MOX77_002819"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase DpiB"
                     /protein_id="HCA3358296.1"
                     /translation="MSYQKNKKLFPFFRQLAFPLRIFLLILVVSVFIVAALAQYLSAS
                     FEDYLASHVRDMAMNQAKIIASNDSIIAAVKNRDYKRLAIIANKLQRGTDFDYVVIGD
                     RHSIRLYHPNPEKIGYPMQFTKPGALERGESYFITGKGSIGMAMRAKTPIFDNEGNVI
                     GVVSIGYLVSKIDSWRLDFLLPMAGVFVLLLVVLMLLSWFFAAHIRRQMLGMEPKQIA
                     RVVRQQEALFSSVYEGLIAVDPEGHITAINRNARKMLGLPSPGRQWLGKLIAEVVNPA
                     DFFTCQIAERRQDVMANFNGLSVIANREAIRSGEELLGAIISFRSKDEIATLNAQLTQ
                     IKQYVESLRTLRHEHLNWMSTLNGLLQMKEYDRVREMVQGESQAQQQLIDSLRGAFAD
                     RQVAGLLFGKVQRARELGLKMVIVPGSQLHQLPEGLDSTEFAAIVGNLLDNAFEASLR
                     TQEGDNTIELFLSDEGDEVVIEVADQGCGVPEALREKIFEQGVSTRADEPGEHGIGLY
                     LIASYVGRCGGVITLEDNDPCGTLFSLFLPKVKKNDDRTINPIDR"
     gene            12268..13343
                     /gene="citC"
                     /locus_tag="MOX77_002820"
                     /pseudo
     CDS             12268..13343
                     /gene="citC"
                     /locus_tag="MOX77_002820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459616.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="[citrate (pro-3S)-lyase] ligase"
     gene            13340..13636
                     /gene="citD"
                     /locus_tag="MOX77_002821"
     CDS             13340..13636
                     /gene="citD"
                     /locus_tag="MOX77_002821"
                     /EC_number="4.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate lyase acyl carrier protein"
                     /protein_id="HCA3358297.1"
                     /translation="MKINQLAVAGTLESGDVMIRIAPLDTQDIDLQINSSVEKQFGEA
                     IRATILEVLSRYDVRGVQLNVDDKGALDCILRARLETLLARASGIAALPWEDRQ"
     gene            13633..14541
                     /gene="citE"
                     /locus_tag="MOX77_002822"
     CDS             13633..14541
                     /gene="citE"
                     /locus_tag="MOX77_002822"
                     /EC_number="4.1.3.34"
                     /EC_number="4.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate (pro-3S)-lyase subunit beta"
                     /protein_id="HCA3358298.1"
                     /translation="MISASLQQRKTRTRRSMLFVPGANAAMVNNSFIYPADALMFDLE
                     DSVALREKDAARRLVYHALQHPLYRDVETIVRVNALDSEWGVNDLEAVVRGGADVVRL
                     PKTDTAQDVIDIENEILRIENACGREPGSTGLLAAVESPLGITRAVEIAHASERLIGI
                     ALGAEDYVRNLRTERSPEGTELLFARCAILQAARSAGIQAFDTVYSDANNEAGFLQEA
                     AHIKQLGFDGKSLINPRQIELLHNLYAPTRKEVAHARLVVEAAEAAAREGLGVVSLNG
                     KMVDSPVIERARLVLSRAELSGIREE"
     gene            14551..>15734
                     /gene="citF"
                     /locus_tag="MOX77_002823"
     CDS             14551..>15734
                     /gene="citF"
                     /locus_tag="MOX77_002823"
                     /EC_number="2.8.3.10"
                     /EC_number="4.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate lyase subunit alpha"
                     /protein_id="HCA3358299.1"
                     /translation="MTQKNESQRQDRVVAWSRHAESELSAYQSAAKLDLQAQKPRDHK
                     LCASLEEAIRRSGLRDGMTLSFHHAFRGGDLTINLVMETIAKMGFKNLTLASSSLSDC
                     HAPLVEHIRNGVVSRIYTSGLRGPLAEEISRGLLAEPVQIHSHGGRVHLVQSGELNID
                     VAFLGVPSCDEFGNANGYTGKACCGSLGYAMVDADSAKQVVMLTEQLLPYPHNPASIA
                     QDQVDLIVQIEEVGDANKIGAGATRMTTNPRELLIARSAAEVIAHSGYFNEGFSLQTG
                     TGGASLAVTRFLEDKMRSRNIVANFALGGITATMVNLHEKGLIRKLLDVQSFDRNAAQ
                     SLARNPNHIEISANQYANWGSKGASVDRLDVVVLSALEVDTHFNVNVLTGSDGVLRGA
                     SGG"
BASE COUNT         3908 a         4246 c         3800 g         3780 t
ORIGIN      
        1 gtttaagcca gcagttcagc gtaccaggac gcgtaataca aaacggcgcg gtctggcgta
       61 ttcaactggg gccttttgcc agtaaagccg aagccagcgc gttacagcaa cgtttgcaaa
      121 cagaagcaca attacagtcc tttatcgcca gcgcgcagta accgattgca ggtatctgta
      181 ctgtcaattt ctgtaaatga cattaacaaa gtcacgcgga aagtcagatg cctgccagtt
      241 atgcttttgc tatagtaggg ctctttttta atttcatcac ggacgtcgta gttcagacca
      301 tgaagaccac tttttccgct cgttttatgc agcgcatggc gctcaccacg gcgctttgtg
      361 ccacgtttat ctcaaccgca catgccgatg acctgaatat caaaactatg atcccgggtg
      421 ttccgcagat cgatgcggaa tcctacatcc tgatcgacta caactccggc aaagttctgg
      481 cggaacaaaa cgccgacgaa cgtcgcgacc cggctagtct gacgaagatg atgaccagtt
      541 acgtcatcgg acaggcaatg aaagcgggta aatttaaaga aaccgacctg gttaccgtcg
      601 gtaatgacgc ctgggccacc ggcaatccgg tatttaaagg ctcttcgctg atgttcctca
      661 aaccgggaat gcaggtaccg gtctctcagt tgatacgcgg catcaatctg caatccggca
      721 atgacgcctg tgtggcgatg gctgatttcg ccgccggtag ccaggatgct ttcgtcgggc
      781 tgatgaacag ctatgtgaac gcgttggggc tgaaaaatac ccacttccag accgtacacg
      841 gcctggacgc cgacggacaa tacagttcag ctcgcgatat ggcgctgatt ggccaggcgt
      901 taattcgaga tgtgccgaac gaatatgccg tttataaaga aaaagagttc acctttaacg
      961 gcattcgcca gttaaaccgt aacggtctgc tgtgggataa cagcctgaat gtggacggca
     1021 tcaaaaccgg ccataccagc aaagcgggct ataatctggt cgcttccgca accgaaggcc
     1081 agatgcgatt gatttccgcc gtaatgggcg gacggaccta taaaggccgt gaaacagaaa
     1141 gcaaaaaact gctgacgtgg ggcttccgtt tctttgaaac cgttaatccg ctgaaggctg
     1201 gtaaagagtt cgcctctgaa cccgcctggt ttggtaatac cgatcgcgcc tcgctgggcg
     1261 tcgataaaga cgtttacctg acgatccctc gcggtcgcat gaaagatttg aaagcgagct
     1321 atgtactgaa taccgcagaa ctgcacgcgc cgctgcagaa aaaccaggtg gtcggcacca
     1381 tcaacttcca gctggacggt aaaaccatcg agcagcgtcc gctggtcgta ctgcaagaga
     1441 tcccggaagg gaacttcttc ggtaaaatca ttgattacat taaattaatg ttccatcact
     1501 ggtttggata aaaattgaac gcttgaaagt gtgattttcg tccccatata ctatgcatca
     1561 gtaaaactcc cgccctgtgg cgggagttgt tattttttta cgtaatgccg gagctgacat
     1621 gaaaaccaaa cttaacgaac tgcttgaatt ccctacgcca tttacttaca aagtaatggg
     1681 gcaggcgtta cctgagctgg ttgatcaggt ggttgaagtg gtacagcgcc atgcgcctgg
     1741 tgattactct ccgacggtaa aaccgagcag caaaggcaac taccactcgg tctctatcac
     1801 cattaatgcc acccatattg aacaggttga aacgttgtac gaagaactgg gtaatattga
     1861 tatcgtgcga atggtattgt aatacatcca gacggttacc cggtcttatc cgggtaactc
     1921 cccgcctccc ccgctgtgat atactttcct ctcttttttc attctctacg gagatgccgt
     1981 tttgtatcag gataaaatcc ttgtccgcca gctcggcctt cagccctatg aagctatctc
     2041 tcaggccatg cataacttta ccgatatgcg cgatgaaaac agccatgatg aaatctggtt
     2101 ggttgagcat tacccggtgt ttacccaggg ccaggccggt aaagcggaac atatattgat
     2161 gcctggcgat attcccgttg tgcagagcga tcgtggagga caggtgacct atcatggtcc
     2221 gggccaacag gtaatgtacg ttttacttaa cctgaaacga cgtaaactgg gcgtgcgtga
     2281 tttagtcacc ctacttgaac agaccgtggt gaatacgctg gctgaaatgg gtattgaggc
     2341 gcatccgcgc gccgatgcgc cgggcgtcta cgtgggtgaa aagaaaatct gctcgctggg
     2401 tttacgtatc cgtcgcggct gctcattcca cggtttagcg ctaaacgtta acatggatct
     2461 ttctcctttc ctacgcatca acccgtgtgg ttatgccggc atggaaatgg ctaaaataac
     2521 gcagtggaag gaagacgcta ccacagataa tattgcgccc cgcttgctgg cgaatatttt
     2581 agctctgcta aataatccac cgtatgaata tattgctact taatgcgtaa aatataatgg
     2641 cccaagaaat ttatgggtca ttaatcatat atgatttgaa tgctttactt ctccccccgc
     2701 tttctatatt ttcgttatat ccctgctgta gccgccaggc ggcatggcct cttcagtcct
     2761 catgatgagg aattttccgt gaacaaaatc ccggccttgc tgttacttat cttattgaaa
     2821 tgactaaaaa tacattcata agagtaattt taaaaccaac tcataaatgc aaaatatact
     2881 atttaatcta ttattcataa tacgaatgaa ttcggagcca gagcgtgagt gataataatc
     2941 aggcagaaag acaaccggcc gatcaacacc tacaagacaa accgcaaatt ttcagaacac
     3001 tgagaaatat tgacctcaat ctgttgacga ttttcgaggc cgtatatgtc cataaaggga
     3061 tcgtcaatgc agcgaaaatt cttaacctga cgccgtcagc catcagccag tccattcaaa
     3121 aattacggac tatatttccc gatccgctgt ttattcgcaa aggccagggc gtaacgccca
     3181 cgacgtatgc tacgcatctg cacgaataca tcagccaggg gctggaatct attcttggcg
     3241 ccctggatct tacgggcagc tatgataagc aacgcaccat tacaattggc acgacacctt
     3301 cggtcggcgc gctagtgatg ccgattattt accaggccat caggccgcgt tatcctcagc
     3361 ttttgctgcg caacattccg gtagacgatg ccgaaagcca gcttagtcag tttcagaccg
     3421 atctcattat caatacccat agctataaca accggagcat ccagcatcac gtcctgttta
     3481 gcgatacgct tgagattgtc tgccgccagc atcacccgtg tctggcgaac gccattactg
     3541 aagagagact gaacagcgcg gatcacacct ttctgatgct ggagggacaa catctttccc
     3601 tcctgcgcca gcgactgcag gagacatttc ccgatcagca aatcagtttt agcagctaca
     3661 atatttttac cattgcctcg ctgatcgcca gcagcgatct gctgggactg atgcccaccc
     3721 gcttctacga cttatttagc cgttgctggc cgcttgaacg ccttccctac gcgccggtga
     3781 atagtgaaca ggtcgagttc tcgctgcatt acaataaact gagtctgcgc gatccggtgc
     3841 tggagaacgt cattgatatc atccgtgagg cgttctgaca aaaatgttgc attcaggtca
     3901 cggaagatat gggcaaacag cacaaaacaa caactatttt acattttgcc gggctgtcag
     3961 gctgctttat ggcccttatc aatgatatac tgcgtgtcac aaattcaaaa atagttgata
     4021 aatacaactt tcccttgaat tgaaacgctt tccttcgtta ttcgcaactg gaacacgcac
     4081 gctatgagta aacccattgt gatggaacgc ggtgtaaaat accgcgatgc cgataagatg
     4141 gctcttatcc cggttaaaaa tgtggtcaca gagcgcgacg ctctactacg taaaccggaa
     4201 tggatgaaaa taaaacttcc ggcggattct acccgtatcc aaggcatcaa agccgcaatg
     4261 cgcaaaaatg gcctgcattc tgtctgtgag gaagcgtctt gcccaaacct ggctgaatgt
     4321 ttcaaccacg gtaccgctac gtttatgatc cttggcgcca tttgcactcg ccgctgtccg
     4381 ttctgtgatg tcgcccatgg ccgccccgtt gcgccggatg cggaagagcc gcagaaactg
     4441 gcgcaaacga tcgccgacat ggcgctacgc tatgtggtca tcacctctgt cgaccgtgac
     4501 gatctgcgtg acggcggcgc ccagcacttt gctgactgca tcaccgccat ccgcgccaaa
     4561 agcccggaga taaaaataga gaccctggtg ccagacttcc gtggacgtat ggatcgcgcg
     4621 ctggatattc ttaacgcgac gccgccggat gtgtttaacc acaacctgga aaacgtgccg
     4681 cgtatttacc gccaggttcg tccgggcgcc gattacaact ggtcgctgaa attactggaa
     4741 cgcttcaaag aagcgcaccc ggaaattccg acaaaatcgg gtctgatggt gggcttaggc
     4801 gaaaccaatg cggaaatcat tgaggttatg cgcgacttac gccgtcacgg cgttaccatg
     4861 ctgacgcttg gtcagtatct acagccaagc cgccatcacc tgccggtaca gcgttatgtc
     4921 agcccggaag agtttgacga gatgaaagca gaagccctgg cgatgggctt tacccatgcc
     4981 gcctgtggcc cctttgtacg ttcttcgtac catgctgatc tccaggccaa aggcatggaa
     5041 gtgaaatgat cgtgtaatag acgcttacat ttcaggcaaa aaaaaaccgg caactcgccg
     5101 gtttttttac tctgcggagc aagcgcattg cgctattact ctttatgcga gagtttttca
     5161 gcctgaacgc taccgtcgac gtctttctta acgcccgcgt cttcatcgtt cattgctttc
     5221 ttgaatcctt taatcgccgt gcccaagtct ccgcccagcg tacgtaactt cttggtacca
     5281 aacagcagaa caaccagtgc ggcaaccacc agcagtttgg taatactaat ctcacccata
     5341 gataccttct tcactaaaaa caggctgcgt aacgcgccgg attaacctga gaatattaac
     5401 ggtctttcga cgcgcgcaca caatagcaat ctgtaacaag gtgaatcaag ctttgcgtaa
     5461 aaaacatcat aataattgcg gtggcgcaaa tcgtcgttgc tgcaaaagag gaagttgctc
     5521 ccgcacctgg tctattcgtt ctctgaatat ttccgcgacg atcagcgccg gacgatcggc
     5581 tgccgcggct atcgttaccc ccaacggtcg ataatacgac tttgaccaat attacgatta
     5641 ccacactccc cggccgcaat catatagcag gtggtatcca gcgctctcgc cgccagcagc
     5701 gtcgaccact gctgctcttt caacgggccg cgaacccagc ccgtcggcag cgccaatacg
     5761 tcagccccct gtaaagccag cgctaacgcc atatccggaa agcgcaggtc ataacaggtc
     5821 ataagaccca ccttaacccc ctccacgtcc agcacaggcg cgataacggt tccggcatca
     5881 atactttggg attcttgcat cgaaaacgca tcatagagat gcagcttcgc gtaacgcgcg
     5941 acaatgtgac ccgcccgtag cgccaccagc atattaaccg cccgtccagg cgttgacggg
     6001 acaaggatag tgaatatcgt cgtcatatta ttatgagcgc tttcttccag aagccgcgtc
     6061 ataaacgcgc catccagcgg ctgcgcggcg cgaatcggca ggtcaaggtc gatgtcatct
     6121 cgcgctaata tcccctcagg caacaccaga agcgatacgc cgcggcccgc cgcctgagcc
     6181 attaacgaaa cgcaaacttg cacattctct tcccatacag aactcaccac aaactgcccg
     6241 gctgcaacga acatatcccc tcccacacct ctgtcaggac tcgccaatta tgcgtgttcg
     6301 gcgttacact cctcttgtat agcaattaaa taaaggattc ggcagtgtta cagcttcttt
     6361 tagcagtttt tattggcggt ggaacgggga gcgtagcccg gtggatgctc agtatgcgtt
     6421 ttaatccgct tcatcaggcg attcccatcg gtacgctaac agcaaattta cttggcgcgt
     6481 ttattatcgg catggggttc gcctggttta accgcatgac acatatcgat ccgatgtgga
     6541 aagtgctcat tacgaccggc ttttgcggcg gcctgacgac cttttctact ttttctgccg
     6601 aagtggtatt cttgctgcaa gaggggcgct ttggctgggc gctgctgaat gtgctgatta
     6661 acctgttggg ttcgtttgcc atgacggcgc tggcattctg gctattttcc gccgccgcag
     6721 cgcgttaagc gcaaaaaaaa cccgccgaaa gggcgggttt tgaaatcttg ctgtcggacg
     6781 tatgcttaca gagcagttac gtttgcagcg gaagggcctt tggcaccgtt agtgatttcg
     6841 aactctacgc gctgaccttc agccagagtt ttaaaaccat tggtctggat tgcagagaag
     6901 tgtacaaaca cgtctttgct gccatcttcc ggagtaatga aaccgaatcc tttggattca
     6961 ttaaaccact taacgttacc tttaatctta gacatcaaaa ttacctttac atgaaaaata
     7021 gacacaaatg ctgtatcgga taccagtaca acaattgtga tgcattttgt ccagtcgaac
     7081 tttgcgaaaa agtgataaat atcgcgttaa tttttagcta accctatcta cttattgttt
     7141 tttaaggctt tttaattcac aacagaacaa tgcccttctc cgtcaaaact ggaaacgcat
     7201 ccaggcaaaa tagacgtttc cgttgttata cgaacccgga atgtaggtca tctgaaaggt
     7261 agcgggacca tagcctatcg acgctaaagg caacagcaca gggatgggaa tataattcca
     7321 gttgtcgcgc gcggtaacgc ctgcggtaaa gcccagtccc agacgaaaat tatcgtcttc
     7381 cagcggtcgc caggtttttt cccagccata accgcctatg ggttcccatt tgttaaatga
     7441 atctttaaag gccatcatat agaggccatg ccagttgcct ttatcgtccc agcgcgactg
     7501 accaaaacca acgccccacg gccgttcgtt atagcgatcc gttttctctt tatcgtaggc
     7561 aaagcgcgca tgccaggtaa tggcggggac atacaaatca taatactcag gctgtcgcca
     7621 cgtttctgcg acgttatcgg taaacgtgtt aaaccaccct ttatccgccg cagagactga
     7681 aggaatagcc agccatggca taacaaggag agcaataata agaaaatact ttctgatgat
     7741 catcgcaaca tacataccgt tcaaaaattc gactgtgata ataacaacat taacctgaat
     7801 aaaatcttaa caaactataa acagagaata atctgagaga gtatcgggtt aacggcgttt
     7861 gatttagcac tcagaaccgt cacgcgctcc ttaataagct ttcacaaaaa acacaaaaca
     7921 aagcacaaca aataaaacaa taaaataaca ataaattaat acttatagcg ctacagaaaa
     7981 tttgtataaa catatttcat ctttagtgat gacatgaaaa aataaccgcg ccgtgatttt
     8041 aatcagtaag gcgccatcct ttattcggta catttttata ccacttttgt ggttcttatt
     8101 tttactctgg gtgtcgataa gacaggggaa acaatgctaa cagttataga gctccttatc
     8161 ggagtcgtcg ttattgtggg tgtagcacgc tacatcatta agggatattc cgccactggc
     8221 gttttatttg tcggcggtct ggttctgctt attatcagcg cgctgatggg gcataaggta
     8281 ttacctgcca gcgaaaccag taccggctat accgcaacag atattgttga atacatcaaa
     8341 attttgctta tgagtcgcgg cggcgatctt ggcatgatga tcatgatgct gtgcggcttt
     8401 gccgcctata tgacgcatat cggcgcaaat gatatggtcg tgaagctggc gtcgaaacct
     8461 ttacagtata taaactcgcc ctacctgttg atgattgccg cctattttgt cgcctgcctg
     8521 atgtcgctgg ccgtctcttc cgcgacgggg cttggcgtac tgctcatggc tactctcttc
     8581 ccggtgatgg tcaacgtcgg cattagccgc ggcgcggcgg cggctatttg cgcttcgccg
     8641 gccgccatca tcctctcgcc aacgtctggc gatgtggttt tagccgcaaa agcggcggag
     8701 atgccgttaa tcgatttcgc gttcaaaacc acgctgccga tttccatcgc cgccattatc
     8761 ggtatggcga ttgcgcattt tttctggcaa cgctatctgg ataaaaaaga gaacatttca
     8821 catgagatgc tggacgtggc ggagattacc accacggccc cggcgtttta tgcccttttg
     8881 ccgttcacgc ccattatcgg cgtactgatt tttgacggta aatgggggcc gcagttgcac
     8941 attattacca ttctggtcat ctgtatgctg ctggccgccg tgctggaatt cgtgcgcggc
     9001 ttcaacacgc aaaatgtgtt ttccggcctg gaagtggctt atcgcggcat ggcggatgcg
     9061 tttgccggcg ttgtgatgct gctggtcgcg gcgggcgttt tcgcccaggg gctgagcacc
     9121 attggcttta tccaaagtct gatctcgatt gccacttctt ttgggtccgc cagcattatt
     9181 ctgatgctgg tcttagtgat tttaaccatg ctggccgcga tgaccaccgg ttcaggcaat
     9241 gcgccttttt acgcctttgt tgagatgatc cctaaactgg cgcactcctc cggtatcaac
     9301 ccagcctatt tatccatccc aatgctgcaa gcctcaaacc tggggcgcac gatttcgccg
     9361 gtctccggcg tcgtggtcgc tgtcgccggg atggctaaaa tatcaccgtt tgaagtggtg
     9421 aagcgcacgt ccgttccggt catcgtcggt ctgttgatcg tcattatcgc tacggaaatt
     9481 atggtgccag gcgcctcttc cgccgtcacc ggcggctgat agccggtaag ccggggcgag
     9541 ggaaaacatc gctccggcat cttaaagcgg gcttagccgc cgtgataaat acgctgcggc
     9601 ctgcccactt tgccatgaat aatctctgcg acaatcaggt gccgactcgc gcaatattcc
     9661 aggtagcgtc gggatgtggt gcggcttatc gttaaggcct gcgcgaccgt ttcagccgta
     9721 tggcgtacgg ttggatcggc aaacagcttc atcaccgcat taagggttaa ggcatcaata
     9781 cctgtcggca aatccccttt cggttcgccg cgcgcatagg cgttgaacat ttcatctatc
     9841 tgcttctggc ttgcgctatc cgcgctcgcc agcatacgtc tgcgctgttg ataacgggtc
     9901 agcgtctgcc ccaaacgctc ataagcaata ggtttgacca gataatcaaa cgcgccgcta
     9961 cgtaccgctt ccgctaccgt ctccatgtca ctggcggcgg tcgtaaacac gacgccgccg
    10021 ggatagcgcg actgcattaa ttcatgcagc agcgtaatcc ccttcccatc cggcagataa
    10081 ttatccaaca gaattaatcc aggtttgaac cggtcaatca tcattctcgc ctgcgccaga
    10141 ttgcccgcca gccatatctg gttaaagcca ggaatatggc ggatatattc tgcgtgcatt
    10201 tccgccagca gcgtttcatc ctcaacgatc aatagggtta atggttctgt catcgttttt
    10261 tttcactttc ggaaggaata aagaaaataa ggtgccacaa ggatcattgt cttccagcgt
    10321 aatgaccccg ccacagcgcc ccacataact tgcaatcaga tataacccga taccatgctc
    10381 accgggttcg tcagctcggg tacttacgcc ctgctcaaaa attttttccc gcagcgcttc
    10441 aggaacgccg cagccctggt cggcgacctc tatcaccacc tcgtcgccct cgtcgctcag
    10501 gaaaagttcg atggtattgt cgccttcctg tgtacgtaaa ctcgcctcaa acgcgttatc
    10561 cagcagattc ccgacgatgg cggcgaactc cgtgctatcc agcccctccg gcagttgatg
    10621 taactggctg ccgggaacaa tcaccatctt gagccccagt tcacgcgcgc gctgaacttt
    10681 gccaaacagc aaaccggcca cctgacgatc ggcgaaggcg ccgcgtaaac tatcaataag
    10741 ttgctgctgc gcctgcgatt cgccctgcac catctctctg acccgatcat actctttcat
    10801 ttgcagcagg ccgttcagag tcgacatcca gttcaggtgc tcatggcgta gcgtgcgcag
    10861 gctctcaaca tactgtttaa tctgggttag ctgcgcgttc aacgtcgcga tttcatcttt
    10921 gctgcgaaaa ctaataatag cgcccagcag ctcctcgccg gaacggatag cctcacgatt
    10981 ggcgatgacg ctcaggccat tgaagttggc catcacgtcc tggcgtcttt ctgcgatctg
    11041 gcaggtaaaa aagtctgccg gattgacgac ttccgctatc agcttgccca gccactgacg
    11101 ccccggcgac ggcagcccca acatttttct cgcattgcgg ttaatcgcgg tgatatgtcc
    11161 ctccggatca acggcgatca gcccttcata aaccgagcta aataacgcct cctgctggcg
    11221 taccacgcgc gcaatctgtt tcggctccat gcccagcatt tgtcggcgga tatgcgcggc
    11281 gaaaaaccag gaaagcagca ttaataccac cagcaacagg acaaaaaccc ccgccatcgg
    11341 taataagaag tccagccgcc aggagtcgat tttactgacc agatagccaa ttgaaacaac
    11401 gccgatcacg ttgccttcgt tgtcaaagat aggcgttttg gcgcgcatcg ccatccctat
    11461 tgagccctta ccggtaatga aataactttc tcctctttcc agcgcgccgg gtttcgtaaa
    11521 ctgcatggga tagccgattt tttccggatt cggatggtaa agccggatcg agtggcgatc
    11581 gcctatcacc acatagtcaa aatccgtccc gcgctgcagt ttattcgcaa ttatcgccag
    11641 gcgtttatag tcccggtttt ttacggcagc gataatgctg tcgttagaag caataatttt
    11701 tgcctgattc atcgccatgt cacgaacatg ggacgccaga taatcttcga aactggcaga
    11761 caaatattgt gctaacgctg ccacgatgaa aacagaaacc accagaatga gcagaaaaat
    11821 acgtaacgga aacgcgagtt gccgaaaaaa aggaaacagc tttttatttt tctgatagga
    11881 cattaaggtt ccttatgggt atttctctac agatttatcg caaatgtaat aaaaatgttt
    11941 tgagtatctt gaagcatata aaaaccaatc gttacagatt ccccacatta aatcaattaa
    12001 acaactaaaa cccactgccg gaatggcgat taaattaatt aaaaaactta aaaccataaa
    12061 acacttaaaa accatctaac gctttgtgaa ataaatcaaa atttaccacc aaaatactcc
    12121 ttacgatgta tacgtcagag agaaaaataa ataactcgtc ataaaaatac tcccactctg
    12181 actgaaaaga aaaagttatc aagttgcaac acaacgcaac atatacagaa aagtggcaac
    12241 aagcatatca ccaggatatt tcttactatg tttggcaata atgtattcac tcgggtaaaa
    12301 cgctctgaaa ataaaaaatg gcggagatcg ctcactttct caaagagaat gatttaagcg
    12361 tcgataccac tgtagaagtg tttattaccg tcagccgtga tgaccgtctt attgcctgcg
    12421 gcggtattgc cggaaatatc attaaatgcg tggccattag cgaatcagta cgcggtgaag
    12481 gcttagcgtt aacgctggcg acggaattga ttaatctcgc ctgggaacgg cactgcaccc
    12541 atctttttat ttataccaaa acggaatacg aagcgctgtt taaacagtgc agcttttcga
    12601 cgatagccag cgtccctggc gtgatggtct taatggaaaa tagcgcgacc cggttgaaac
    12661 ggtatgcgga atcgctggcg acattgcgtc acgagggaaa gaaaattggc tgtattgtga
    12721 tgaacgccaa tcctttcacg cacggccatc gctatctgat ccaacaggcg gcggcacagt
    12781 gcgactggct gcatctgttc ctggtcaaag aagatacgtc acgctttccc tatgaagacc
    12841 gactcgatct ggtccttaaa gggactaccg atatcccgcg cttaaccgtt catcgcggct
    12901 ccgaatacat tatttctcgt gcgacgttcc cctgctattt cattaaagag cagagcgtca
    12961 ttaatcactg ttataccgaa atcgacctga agattttccg ccagtatctg gcgcccgcgc
    13021 ttggcatcac acaccgcttt gtcggtacgg agccgttttg taccgttacc gcccagtaca
    13081 accttgatat gcgtttctgg ctggagacgc caacgcttcc cgccccaccc attacgctgg
    13141 tggaaataga gcggctttgc ttccaggaga cgccgatatc cgcctcctgg gtacgcaagc
    13201 tgctggttaa acacgatctc acggctatcg cgccgctggt tcccgacgcc accctgcgct
    13261 atttgcaggg catggtcgaa cgccatccgg gcagcgcggc agcccgtcaa aagtcccccg
    13321 tattagcaac aggtgaaaaa tgaaaataaa ccagctagcc gtcgcaggca cgcttgagtc
    13381 cggcgatgtg atgatacgca ttgcgccgct cgatacgcag gatattgacc tgcaaattaa
    13441 cagtagcgtt gaaaaacagt ttggcgaggc cattcgcgcc accatcctgg aggtgctttc
    13501 tcgctacgac gtgcgcggcg tacaactgaa cgtcgatgat aaaggcgctc tggactgcat
    13561 tttgcgcgcc cgactggaaa cgctactggc gcgcgccagc ggtattgccg ctctgccctg
    13621 ggaggatcgc caatgatttc cgcctctctg caacaacgta aaacccgcac ccgccgcagt
    13681 atgttattcg taccgggcgc caacgcggcg atggtgaaca attcgtttat ctacccggcc
    13741 gacgcgctga tgttcgacct ggaagactcc gttgcattac gcgaaaaaga cgcggcgcgc
    13801 cgtctggtat atcacgcgct gcaacatccg ctttaccgtg acgtcgaaac catcgtccgc
    13861 gtgaatgcgc tggactccga atggggcgtc aacgatctgg aagcggtcgt gcgcggcggc
    13921 gcggacgtgg tgcgtttacc gaaaaccgac accgcgcagg acgtcattga tatcgaaaac
    13981 gaaattctgc gcattgaaaa cgcctgcggt cgcgaaccgg gcagtaccgg cctgttagcc
    14041 gccgtggaat cgccgctggg tattacccgc gcggtagaaa tcgcccacgc ctctgaacgg
    14101 ttgatcggga ttgcgctggg cgcggaagac tatgttcgca acctgcgcac cgaacgctct
    14161 ccggaaggca ccgaactgct gttcgcccgc tgcgccattt tgcaggccgc gcgttccgcc
    14221 ggcattcagg ccttcgatac cgtctattcc gacgccaaca acgaagccgg tttcctgcaa
    14281 gaagccgccc acattaaaca gttgggcttt gacggtaagt cactgatcaa cccccgccag
    14341 atagaactgc tgcacaacct ttatgcgccg acgcgtaaag aggtcgccca tgcgcgtctg
    14401 gtcgttgagg ccgcagaagc cgccgcccgc gaaggtctcg gcgtcgtttc ccttaacggc
    14461 aagatggtcg acagcccggt gattgaacgc gcccgtctgg tgctctcccg tgcagaactt
    14521 tccggtattc gcgaagaata aggcaaaaaa atgacgcaga aaaatgaatc tcaacgccag
    14581 gatcgcgtag tagcctggag ccgtcacgct gaaagcgaac tgagcgctta ccaaagtgcg
    14641 gcaaaattgg atctacaagc gcaaaaaccg cgcgaccaca aactgtgcgc cagcctggaa
    14701 gaggccatcc gccgttccgg tttacgcgac ggcatgacgc tttcctttca ccacgctttt
    14761 cgcggcggcg atctgacgat taacctggtg atggaaacca tcgcgaagat gggcttcaaa
    14821 aatctgaccc tggcctccag ctcgctgagc gactgccacg cgccgctggt tgaacacatt
    14881 cgtaacgggg tggtcagccg catctacacg tcaggcctgc gcggcccgct ggcggaagaa
    14941 atttctcgcg gcctgctggc tgagccggtt cagattcact cccacggcgg tcgtgtgcat
    15001 ctggtacaaa gcggcgaact caatattgat gttgcgtttc ttggcgtgcc ctcctgcgat
    15061 gaattcggta atgctaacgg ttataccggc aaagcctgtt gcggttctct gggctacgcg
    15121 atggtggatg ccgacagcgc gaagcaggtc gtgatgctga cggagcaact gctgccgtat
    15181 ccgcataacc cggcaagcat cgctcaggat caggttgatc tgatcgtgca aatcgaagaa
    15241 gtcggtgatg caaacaaaat cggcgctggc gcgacccgca tgaccactaa tccgcgtgaa
    15301 ctgctgatcg cccgcagcgc ggcggaagtc attgctcact ccggctactt caacgaaggt
    15361 ttctccctgc aaaccggcac cggcggcgca tcgctggcgg tcacccgctt cctggaagac
    15421 aaaatgcgta gccgcaacat tgtggctaat ttcgcgctgg gcggtatcac cgccaccatg
    15481 gtcaacctgc atgaaaaggg cttaatccgc aaactgcttg acgtgcagag cttcgatcgt
    15541 aacgctgcgc aatctttggc ccgcaacccg aaccatatcg aaatcagcgc taaccagtac
    15601 gccaactggg gctctaaagg cgcttccgtc gaccgtctgg acgtggtggt actgagcgcg
    15661 ctggaagtag acacccactt caatgttaac gtgctgaccg gctccgacgg cgttctacgc
    15721 ggcgcgtccg gcgg
//
LOCUS       DAGWFR010000088        15665 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.090, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000088 DAGWFR010000000
VERSION     DAGWFR010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 15665)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15665)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15665
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.090"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..423
                     /gene="mdsC"
                     /locus_tag="MOX77_002824"
     CDS             <1..423
                     /gene="mdsC"
                     /locus_tag="MOX77_002824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001521068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter outer membrane
                     subunit MdsC"
                     /protein_id="HCA3358300.1"
                     /translation="GSGSWRFLPQITLPLFHGGALRADLDRAHVQKQIEIAWYENVIQ
                     QAFRDVADGLAGQRTLNDQVQSEQRAVEASQIAYELAGLRFQEGVDDYLTLLDTHRML
                     YGAQQRLVRTRLMQQLNIISLYKALGGGWREYSEKKQG"
     gene            complement(493..852)
                     /locus_tag="MOX77_002825"
     CDS             complement(493..852)
                     /locus_tag="MOX77_002825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4156 domain-containing protein"
                     /protein_id="HCA3358301.1"
                     /translation="MKKILVCFVGLALTACSANSLNYGAEQVRVMTSEPGKECSYLGD
                     ITGSQGNFFTGGWTSNSNLETGARNDLKNKAYKMGDNTVVLLTQRAGQTGSSWHGSGS
                     SKQTNVTLSGNVYRCPR"
     gene            complement(910..1134)
                     /locus_tag="MOX77_002826"
     CDS             complement(910..1134)
                     /locus_tag="MOX77_002826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358302.1"
                     /translation="MKKLTMRECESINPTLLLAIKILISALDEKTKIRLREHIEKTEQ
                     EIASSIHDSIMTETFLQQMKDIRYILNIVP"
     gene            complement(1145..1786)
                     /locus_tag="MOX77_002827"
     CDS             complement(1145..1786)
                     /locus_tag="MOX77_002827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HCA3358303.1"
                     /translation="MINSLSEQLPLKTIGIVLTDDYYTYLGIASLFEDGKCFMFPLNG
                     EYNSCQISASEDIIIIIDGRVLIQGVWKGFKALMQHYPHARRIWLTRRDIGKLYPHGC
                     DRDPDIDPDLAKPVFIEHFIKYACANDVAVGEIAPLTKKEEELLWHFLYKKSMSQIAS
                     SYGISRKTLYIHRLRICRKYGFKRFFHLLFIYQRSRHIFASKICRVDKNADQA"
     gene            complement(1932..2456)
                     /locus_tag="MOX77_002828"
     CDS             complement(1932..2456)
                     /locus_tag="MOX77_002828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ail/Lom family outer membrane beta-barrel
                     protein"
                     /protein_id="HCA3358304.1"
                     /translation="MKRRSSFLVFLGLLLASPLALANDQHTVSFGYAQTHLSSLKNSD
                     SKDLRGFNFKYRYEFNETWGMLGSFTATRNEMENYTWKEGKLHKNGSDSVDYGSLMFG
                     PTYRFNDYVSLYGNAGIATMKFNKHSKEESFAYGAGVIFNPVKSISIDASWEASRFFA
                     VDTNTFGVSVGYRF"
     gene            complement(2858..3345)
                     /locus_tag="MOX77_002829"
                     /pseudo
     CDS             complement(2858..3345)
                     /locus_tag="MOX77_002829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459340.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(3318..4061)
                     /locus_tag="MOX77_002830"
     CDS             complement(3318..4061)
                     /locus_tag="MOX77_002830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HCA3358305.1"
                     /translation="MSQNNYLIDKRVILDCERMTLSCAGELITISESERSLLITFYEG
                     LFKKDDLINYVWGRKGVVVSDASYYKLINQLRGSFDKIGLKGESVVTRPRVGVLLSVS
                     IEPLSDEAQDMPLPAVAETELSTVEVRHDDTIIPPIPGAVNRKDWLYFCLAALLMFFM
                     IYKVKGENIDYFTLNGSYDGYTFYSVGHDKTHLADIIEAYSEMSNEIHKQNGKIIYYI
                     RVPNTNIFVQCLNQLDIAEPKCISIKERY"
     gene            complement(4161..5735)
                     /locus_tag="MOX77_002831"
     CDS             complement(4161..5735)
                     /locus_tag="MOX77_002831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic diguanylate phosphodiesterase"
                     /protein_id="HCA3358306.1"
                     /translation="MKVRKLFLMLFIAVPLIVMILVGLLAGIFQLKQDIAVSANTLLR
                     FSADISAASWQVAGKAARLAESSCTDTLKELSRTRAFTPYVRDIGFLENGDITCSFVT
                     GTERYHFSRLAGLSLPASYPERWLRSIGSMAEGPDRLVVVYVKKVAADKAAFVIVDSQ
                     YVQELMEILAAERASAFSLIFGAGEAITSAATLRGKAFLTQRFISTDHTIQLMVRTPF
                     STLSAYWLQNLFIFIPLSLCLSVGMILFYRRWYLKRLSLAREISRGITHNEFTVHYQP
                     VFNVKHGSCGGVEALMRWPQPDGRFITPDIFITAAENEGMIIPLSRHLFELIAHDVIN
                     WTVPDDFYISVNISPAHLMDDGFIQDIEALRTRLGTITLMLELTERSLIVEPSQVAEK
                     LSTLREKGVLIAIDDFGTGYCSLSYLQQLPVDSLKIDRTFIDTIDTSSDDVPVLDTII
                     TLSQRLGLNVVAEGVSTQHQLRYILSHGVGFVQGFLYARPMGTNDFMSWLGKSAQRQN
                     GLLKGESGSASDLVAE"
     gene            complement(6247..6548)
                     /locus_tag="MOX77_002832"
                     /pseudo
     CDS             complement(6247..6548)
                     /locus_tag="MOX77_002832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459337.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(6521..7255)
                     /locus_tag="MOX77_002833"
     CDS             complement(6521..7255)
                     /locus_tag="MOX77_002833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001005860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358307.1"
                     /translation="MNESIFLLDKRVVFDSTKMTLSHGNEIIRISEADTHLLLAFWHG
                     LYKKEDIIHFVWENRGGCVSESSYYKLINQMRNDFSSIGLQLSGIVTRPRVGVSLSVA
                     IEPIKKITSLKVSDENVKGPSTREKIFYKIKRHSVFVVLTGAILLALFYGVFTIYKTP
                     VRNSPDSFFTYLGEYNDYAIYKTKEDKVTLSEVVFAFNSLKIKIYRQNGRHLYYIREP
                     NMNIFLQCLNPVEMAVPKCITVKERY"
     gene            7918..8454
                     /locus_tag="MOX77_002834"
     CDS             7918..8454
                     /locus_tag="MOX77_002834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrial protein"
                     /protein_id="HCA3358308.1"
                     /translation="MSMKKYLAMITGSLLVSSSAMAVSDNTITFQGEVSDETCSVVIN
                     GNQAKPVVLLPTVSTKELSEQGKTAGPITFDIGLSGCTGSKDKTTKISTVFVGNQVTS
                     NGNLGNTGSAKNVEVQLLDTSGEPINLTGGFTGDGDLQLEPNASEASATYTARYYSTG
                     KAEAGTVAATLQYAVSYK"
     gene            8516..9277
                     /locus_tag="MOX77_002835"
     CDS             8516..9277
                     /locus_tag="MOX77_002835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial chaperone"
                     /protein_id="HCA3358309.1"
                     /translation="MKMDTRHSALYYLIVFLLLALPATASWASVTILGSRIIYPSTAS
                     SVDVQLKNNDAIPYIVQTWFDDGDMNTSPENSSAMPFIATPPVFRIQPKAGQVVRVIY
                     NNTKKLPQDRESVFWFNVLQVPPTNIGSDSGKNKMLVMLRSRIKLFYRPDGLGKPDNL
                     AKKLQIKTVNKGSGKSGIVIVNPQPWFASLSNLNVKVNGASYNLDADMIAPFSSQTWW
                     LPGKRSLKSFSGTVTVTLVNDLGARISESYDVPHH"
     gene            9261..11822
                     /locus_tag="MOX77_002836"
     CDS             9261..11822
                     /locus_tag="MOX77_002836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial outer membrane usher protein"
                     /protein_id="HCA3358310.1"
                     /translation="MSPTINLNRKSLALLIAIVCSGSAQGEEYYFDPALLQGATYGQN
                     IARFNEQQTPSGDYLADVYVNGTLVASSTNIRFNAVKEGQQAEPCLPLSVMKAAQIKS
                     LPETDAATECRPLREWVPHAGWQFDSATLRLLLTIPMTELTHKPRGYISPSEWDSGAL
                     ALFLRHNTNWTHTENTDSHYRYQYLWSGLNMGVNLGLWQVRHQSNLRYANSNQSGSAW
                     RYNSVRTWVQRPVASINSILSLGDSYTDSSLFGSLSFNGVKLVTDERMRPQGKRGYAP
                     EVRGVAASSAHVVVKQLGKVIYETNVPPGPFYIDDLYNTRYQGDLEVEVIEASGKTSR
                     FTVPYSSVPDSVRPGNWHYSLAFGRVRQYYDIENRFFEGTFQHGVNNTITLNLGSRIA
                     QRYQAWLAGGVWATGMGAFGLNATWSNARAEHNERQQGWRAELSYSKTFTTGTNLVLA
                     AYRYSTNGFRDLQDVLGVRREAKTGIDYYSDTLHQRNRLSATVSQPLGRLGTLNLSAS
                     TADYYNNQSRITQLQMGYSNQWRNISYGVNIARQRTTWDYDRFYHGVNEPLDVSSRQK
                     YTETTMSFNVSIPLDWGENRTSVAMNYNQSSQSRSSTVSMTGSSGENSDLSWSVYGGY
                     ERYRNSNSDSSAPTTFGGNLQQNTQFGALRANYDQGDNYRQEGLGASGTLVLHPGGLT
                     AGPYTSDTFALIHADGAQGAIVQNGQGAVVDRFGYAILPSLSPYRINNVTLDTRKMRS
                     DAELTGGSQQIVPYAGAIARVNFATISGKAVLISVKMPDGGIPPMGADVFNGEGTNIG
                     MVGQSGQIYARIAHPSGSLLVRWGTGANQRCRVAYQLDLHTKEPFLYLNKICEKE"
     gene            11827..13152
                     /gene="stbD"
                     /locus_tag="MOX77_002837"
     CDS             11827..13152
                     /gene="stbD"
                     /locus_tag="MOX77_002837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial usher protein StbD"
                     /protein_id="HCA3358311.1"
                     /translation="MLFSFRTLLFITSLFVSAGTWSSCIKVTDKSALSDAAIKAGYTA
                     QNWIGALDTNTGNIGLPTVISISNSETFQPSGTLLASGIGNFLTAATGTPYSSKQVLY
                     RCDSADAGKLYEMYSTNGDSAFAGAFFTPEVEGAYYDVERNVAVRMTNLSTGEYYSRF
                     WKERQLTADSWFQDDKYIYIPASAFSNVLYEMFKIDSRKYFAYQNPMDRDTWTQPRGY
                     IAFKGPGLITERIKAGLDHASDYYGWPSYWPGAWSTYNSVTYVRGALCKITDYPAIVK
                     IPPVAVGILAAGGNSQAPFHVSLECESGAVSSALPSTSAANVAMGFVVNQPTAVAAAR
                     RLGLTTSAGGLSWLLDTHYGEPGVASGVGIRIYNDAGTPINLLPDRIKTGTGNARGWY
                     GYKDLTTRVSSGSVETYSGDFTASLEALGGQTVTAGSVNAQLQAVVSFQ"
     gene            13118..13876
                     /locus_tag="MOX77_002838"
     CDS             13118..13876
                     /locus_tag="MOX77_002838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial assembly chaperone"
                     /protein_id="HCA3358312.1"
                     /translation="MRNYRQWLVFSKVILTLLGLTGWYGPAQAAVNIDRTRIIFASDE
                     VAQSLTLSNDNTTPMLLQVWTDAGNIDASPDNSKTPLVALPPVFKMQPGELRTLRLLL
                     SSRQQLATDRESLFWLNIYQIPPVTQDIKNHPRKLVLPLRLRLKILIRPTGLKAPTEA
                     EEKKLRFIAKENTIRIVNPTSWYMSLTLTMDNKKSIGDIMVAPKTALDVPLTRSPTPG
                     ASINYAVINDSGNWRQYTAILEKYISKSNFIPEF"
     gene            complement(13924..14322)
                     /locus_tag="MOX77_002839"
     CDS             complement(13924..14322)
                     /locus_tag="MOX77_002839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358313.1"
                     /translation="MKLIIILLLALFPLCSSASNHYALVFENNTILLVLNLKCSPCDL
                     NCANIQYQLFNKETESVISGAAKPVTTGIENNFRGYMMRNNNTFYSLIESDNKNVWDM
                     SVEEKGTQQNKDAVQKVKYQLNAIFDNGTC"
     gene            complement(14546..14621)
                     /locus_tag="MOX77_002840"
     tRNA            complement(14546..14621)
                     /locus_tag="MOX77_002840"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(14586..14588),aa:Thr,seq:cgt)
     gene            complement(14737..>15665)
                     /gene="proA"
                     /locus_tag="MOX77_002841"
     CDS             complement(14737..>15665)
                     /gene="proA"
                     /locus_tag="MOX77_002841"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HCA3358314.1"
                     /translation="RVPLGVVGVIYEARPNVTVDVASLCLKTGNAVILRGGKETHRTN
                     AATVLVIQKALKACDLPEAAVQAIDNPDRSLVSEMLRMDKYIDMLIPRGGAGLHKLCR
                     EQSTIPVITGGIGVCHIFVDSSADIAPALKIIVNAKTQRPSTCNTVETLLVHQDIAER
                     FLPALSKQMAESGVTLHGDETVMQALHGPAKLVALKPEELDNEFLSLDLNVVVVENMD
                     GAIAHIREHGTQHSDAILTCDMHNAARFVNEVDSAAVYVNASTRFTDGGQFGLGAEVA
                     VSTQKLHARGPMGLEALTTYKWIGFGDGTIRA"
BASE COUNT         4397 a         3770 c         3423 g         4075 t
ORIGIN      
        1 ggatcgggaa gctggcgttt tctaccgcaa atcaccttgc ctctctttca cggcggcgca
       61 ttacgcgctg acctggatag ggcgcatgtc caaaaacaga ttgaaatcgc ctggtatgaa
      121 aacgttattc agcaagcctt tcgcgacgtg gcggatggtc tggcgggaca gcgtacgctg
      181 aatgaccagg tgcaatcaga acaacgcgcg gttgaagcca gccaaatcgc ctatgagctg
      241 gccggactcc gttttcagga aggcgtcgat gactacctta cgctgcttga tacccatcgt
      301 atgctttatg gcgcgcaaca gcgtctggta cgcacacgtc tcatgcaaca gttgaatatc
      361 attagcctgt ataaagcatt aggcggcggt tggcgggaat acagcgagaa aaagcaaggt
      421 tagcccaaat agcgcgcgcg tcgccagtgc ggcgcgcgcg ctaaacaggc atatattgcc
      481 tgcaaaataa ggttaacgag ggcaacgata aacgttcccg cttaacgtga cattcgtttg
      541 tttgcttgag cccgaaccgt gccatgaact tcctgtctgg cctgcacgct gggttaacag
      601 gactaccgta ttgtcgccca ttttataagc tttgtttttc agatcgttac gggcccccgt
      661 ttccaggtta ctgttggaag tccagccacc ggtaaagaaa ttcccctggc tgcccgtgat
      721 atctcctaag tagctgcatt ccttacctgg ctcgctggtc atcacccgta cctgttcagc
      781 gccataattc agcgaattag cgctacatgc ggttaaagcc aagccgacga aacatactaa
      841 gatctttttc atactaatac ctggtctatt aatcattaaa taataacgcg ttcttgcttc
      901 tgaacgccgt caaggaacta tatttaagat gtaacgaatg tctttcattt gctgaagaaa
      961 agtctctgtc atgatgctat catgtatgct tgaggctatt tcttgttcag ttttttcaat
     1021 atgctctctg agccttattt ttgttttttc gtcaagcgcc gagataagta tcttaatggc
     1081 aagcagcaaa gtaggattga tgctttcaca ctctctcatc gttaactttt tcatcttgtt
     1141 tacttcaagc ctgatcggcg tttttgtcta cacggcaaat tttagatgcg aagatatggc
     1201 gacttctttg gtaaataaat agcaaatgga aaaagcgctt gaagccatat ttacgacaga
     1261 tacgcaatct atgaatgtac aaagtcttac gactaatgcc atagctactg gcgatctgac
     1321 tcatcgactt tttatataaa aagtgccata acaactcttc ctcctttttt gtcaacggcg
     1381 caatttcacc gaccgctaca tcgtttgcac aagcgtattt aatgaaatgc tcaataaaaa
     1441 caggctttgc caaatcggga tcgatatcag gatctctatc gcagccatgt ggataaagtt
     1501 ttccaatatc tctgcgcgtg agccagattc gacgagcatg tggataatgc tgcatgagcg
     1561 ccttaaaacc tttccagacc ccctgaatca aaactcgtcc atcaataata attatgatat
     1621 cttcgctagc tgatatctga cacgaattat attctccatt aagtgggaac ataaagcact
     1681 tcccatcctc aaagagtgaa gcgatgccta aataagtata ataatcatcc gttaaaacta
     1741 tacctatcgt ttttaacgga agttgttccg atagtgaatt tataataatt tcatcaatag
     1801 aataacgcta cggtgagtgt tttatcttcc tcttaagatt acctgactga ttataaccat
     1861 ccctactctg tagcaacgcc atattatatt tttagttcct tgccataaac gtaacgctta
     1921 tacttttaat atcagaagcg ataacctacg ctgacaccaa atgtattggt atccacagcg
     1981 aagaaacggc ttgcttccca tgatgcatcg atagatatac tcttaacagg attaaatatt
     2041 acaccagcgc cgtaggcaaa ggactcttct tttgagtgtt tattaaattt catcgtcgct
     2101 atacccgcat tgccgtacag gctcacatag tcattaaagc gatatgttgg tccaaacatc
     2161 aaagaaccat agtccacaga atcggaacca tttttatgca atttcccctc tttccaggtg
     2221 tagttctcca tttcattgcg cgtcgcagtg aatgagccta acatccccca ggtctcattg
     2281 aactcgtaac gatatttaaa attaaagcct cgcagatctt tgctatcgct atttttcaat
     2341 gaactgagat gagtttgtgc ataaccaaac gatacggtgt gctgatcgtt agccaaagct
     2401 aaaggtgacg ctaataataa acctaaaaaa acaaggaacg aagaccgtct tttcattaaa
     2461 accactccat ttttgatata taattaaggc ggtaccggaa cttatggcac acaaatagca
     2521 tttagattaa gagcacctaa tgcgcttatt accagtcatg ccaactgcgg aggtaatata
     2581 acctgatata ttcgataatg gatatgaaat cagtcttaca gagttcttac ttttttatta
     2641 atagcggatt catagttgct tcagacccga tcctggcatc gcatccgtca ggcggactgc
     2701 gagaggttat cagcgagtat cagttacctc cctgtcgagt caaaaattca taactcattg
     2761 ttttatatgc attttaattg attattgagt taacctttac ccttgccgag ggcaatttcg
     2821 caactcgctt tctgacgcat tcagacaaca ttcagatcta ctgcgcggta caaacgttat
     2881 aaagctgccg attaagagaa taaaaaaggt tttctcaccc actttagata ttcgaatctc
     2941 attagccgct tccggatgca gaacccgtaa atatgataac agatcgccag ccgtgtccgt
     3001 ggcaaagact tttacctggg atacttcgaa cgtataaaca ccaggcgctg ttcgatgtaa
     3061 atttttcata tacacgtccc ggtataatat ttttacaccg ttatcttttg tttttatttc
     3121 atattgaagc gtaattctct tcatcttaaa atcaagaaca agactgccat cggcatggat
     3181 atctttaggc tgtatcgtcg ttaccgttct tgtcgtacat aaaaattcat tagtattaat
     3241 agaactatgg ttactgtttc gtacccaaac taccatcagt acgactgaaa cagccaacat
     3301 accaagcgtc gccacgctta ataacgttct tttatggaaa tgcatttcgg ctccgctata
     3361 tcaagttggt taagacactg gacaaaaata tttgtattag gaacgcgaat gtaataaatg
     3421 atttttccgt tttgtttatg tatttcatta ctcatctcag agtacgcttc aatgatatcc
     3481 gccagatggg ttttatcatg cccgacacta taaaaagtgt atccatcata cgaaccattg
     3541 agggtaaaat aatcaatatt ttcaccctta actttataaa tcataaaaaa catcagaagc
     3601 gcggccaggc aaaagtagag ccaatctttt ctattcacag cgcccggtat tgggggaata
     3661 atagtatcat cgtgccgcac ttcaaccgtc gataattctg tttcagcaac agcaggcaac
     3721 ggcatatctt gcgcctcatc actcaacggt tcaatggaaa ctgagagtaa aacacccacg
     3781 cgagggcgag tcacaacaga ctccccctta agaccaattt tatcaaatga tcctcgtagc
     3841 tggttaatca gtttataata actggcatca gagaccacaa cacctttgcg cccccagaca
     3901 tagttaatta aatcatcttt tttaaaaagg ccttcataaa aagtgataag caaactgcgt
     3961 tccgattcag atatcgttat caactctccg gcgcaggaaa gcgtcattcg ttcacaatca
     4021 agaataaccc ttttgtcaat cagataattg ttctgactca taaaaatatc cgccccagtg
     4081 ctatcacgtt tcttcacggc ataaacatat tactaggata tatcgtgcta ttgaattttt
     4141 ttccgtagcg agttcctgca ttattcagcc accagatcgc tcgcggatcc gctttccccc
     4201 ttgagcaaac cattttgccg ctgggctgac ttgccaagcc aactcataaa gtcattagtc
     4261 cccatcggcc tggcataaag aaatccctga acgaatccta ccccgtggct taagatgtaa
     4321 cgcaattggt gctgggtact gaccccttcg gcaaccacat tgagtcccag tcgctgactc
     4381 agcgtaatga tagtatccag gacaggaaca tcatcgctgc tggtatcaat ggtatcgata
     4441 aacgttctgt ctattttaag agagtctaca ggtaattgct ggagatagga gagggagcaa
     4501 tagccggtcc caaaatcatc aatcgctatt aacacgcctt tttcacggag cgttgaaagt
     4561 ttttctgcga cctgtgaagg ttctacaatc aggctacgtt cggtgagctc caacataagc
     4621 gttatcgttc ccaaacgagt cctgagcgcc tctatatctt gtataaaacc gtcatccata
     4681 agatgcgcag gcgatatatt tacgctgata tagaaatcat ccggtacagt ccagtttatc
     4741 acgtcatgag caatcagttc gaacagatga cgagagagtg gaataatcat gccttcattt
     4801 tctgcggcgg taataaaaat atcgggagtt ataaaacggc catccggttg cggccagcgc
     4861 attagcgcct ccacgccgcc gcaactaccg tgtttaacat taaaaacagg ttgataatgt
     4921 accgtaaatt cattgtgcgt tattcccctg gaaatctccc gggccagaga taagcgtttt
     4981 aaataccagc gcctgtagaa caatatcatc cctacagaaa gacataatga cagcggaata
     5041 aaaataaaaa ggttttgtaa ccagtatgcc gataacgttg agaaaggggt tcgcaccatc
     5101 agctggatag tgtgatcggt tgagatgaac cgctgcgtta aaaacgcctt accgcgcaac
     5161 gtcgcagcgc tggtaatcgc ctctcctgcg ccgaatatca ggctaaaggc tgatgctctt
     5221 tctgcagcca atatctccat gagctcctgg acatactgcg aatccacaat gacgaaagcc
     5281 gctttatccg ctgctacttt tttcacatac accacaacaa ggcgatcggg tccttcggcc
     5341 atactaccga tagatcgcaa ccaccgttcc ggataagaag caggtaaaga aagccctgcc
     5401 agccgggaaa aatgatagcg ttcggttcct gtgacaaagg agcaagtgat atcaccattt
     5461 tccagaaacc caatgtcacg gacataagga gtgaaggccc gcgttctgga cagttctttc
     5521 agcgtgtcag tacaggaact ctcagccagt ctggcggctt ttccggcgac ttgccaggag
     5581 gcggcggata tatccgcgct aaaccgcagc agcgtattgg cgctgacggc gatatcttgt
     5641 tttagctgga agatacccgc gagtaacccc accaatatca ttacgatcag tggaacggca
     5701 ataaacaaca tcagaaatag ctttcttact ttcaaatcat tgccctctta ccggccttcc
     5761 ttttgccact gtacgctttt ataggataac taaagtaaca ttaatagaga aaagaaatat
     5821 tgagagatag gttatacgtt cttaatgata gcaagatggc actccctgtg ccgaaaacag
     5881 acaagagaat atcaataccc aacaggtgca ggatactatc gttaaaatga gcgataacag
     5941 atatctaaat aaagacgcat tcaatatgtt agcctgatgc caggttcact gcctgatgag
     6001 acataaccat cacggaacga attcccatca atacagggat tattggttac aactcaacgt
     6061 tactactggt ggtacacaca ttatacaaat gccgattaag cgaaaacatg taggtgtttt
     6121 tcccaatttt gacaattttt agctcattaa tcgtaccggg ttgtaacaac ctcaaccagg
     6181 aaaataaatc gccagcagta tcagactcaa aggtcttaac tgaattgact ttaaaagtaa
     6241 atgttttcat acccgttctg cgcagtttgc tgatgcagat gtcacgaaaa aaaaagccgt
     6301 ttctctttcg tatcggtagt aacatcgtag tgtagggtaa tcctgccgga tttaagatcc
     6361 agcacaagtc caccatccat gtacaatttt cgtggttcaa tatacgcttc tgattttgtc
     6421 gtgcatataa gattattggt tctataagag tcacgattta cccactcaag cgctattacc
     6481 gatccgattg cgacaatggc gataaatatt acaaatataa tcagtaacgt tcttttactg
     6541 taatacattt tggcaccgcc atttcaacag gattcaagca ttgcagaaaa atattcatat
     6601 ttggctccct gatataataa agatggcgtc cattttgccg gtaaatttta atttttagag
     6661 agttaaaagc aaaaactact tcacttaatg tgaccttatc ctcttttgtt ttatagattg
     6721 cataatcgtt atattcgcca agatatgtaa aaaaactatc agggctgtta cgaacaggcg
     6781 ttttatagat agtaaataca ccatagaaca atgccagaag aatggctcct gttaatacta
     6841 caaatacgct gtgacgttta attttgtaaa atattttctc ccgagtcgag gggcctttaa
     6901 cgttttcatc actcaccttt agggaggtga ttttttttat aggttcaatg gcaacagaca
     6961 gcgacacccc cacccgaggg cgagttacga tgccagatag ctgtagaccg atgctactaa
     7021 aatcatttct catttgatta atgagtttat agtaacttga ttctgagacg cagcctccac
     7081 gattttccca aacaaaatga ataatatctt cttttttgta aagaccatgc caaaaagcaa
     7141 gaagcagatg ggtatcagct tctgatattc tgattatctc attaccatga gataaggtca
     7201 tcttcgtact atcaaataca acacgcttat caagtaaaaa tatgctttca ttcatgacaa
     7261 tcctaaaggt aactgcatcc atcattcaga cgacatatta tcatgctcaa aaaagaattc
     7321 agccccctaa ttaacctgag tttaacttat aactctcact tatagtaaac aataattgac
     7381 acaagtatta cctgcacatt acaaatcaaa cagttatagg taaatctgaa cacttttctt
     7441 taccttaacg caaactcagg aaacttctga aaggccaaaa gtaagaaaaa agtaagacta
     7501 attatactgt ttcagaagca catttcagaa aatttacctt aatctcacca tcgtattatc
     7561 catcgggagg tttaactgat acggatttta catagcaaaa atgtgcaggt tgtattgcaa
     7621 catagtctat ctattcagcc gcggagagaa ttgttatcgg attacactca attaaatgat
     7681 aacactatca gttgtactaa tgagatgtat ggacgaaagc gcttatcgct ctatttcatg
     7741 atgagagaaa taagtctgtt tgttttatat cgcattatca atagtcagga gggtatagct
     7801 cacatccaaa aatagagtta atgatcgtta tttttaccac tcctccataa gcacgaaaca
     7861 ttcgggcgaa ttgcactcgt cctgaaaaag taaagattaa tacaggaaca ttattatatg
     7921 tctatgaaaa aatatttagc aatgatcaca ggctcgcttc ttgtctccag cagcgcgatg
     7981 gctgtttctg ataacaccat cacctttcaa ggggaagtct ctgatgaaac gtgctctgtc
     8041 gtgattaatg gtaatcaggc taaacccgtc gtgttattgc caacagtaag tactaaagag
     8101 ttatcagaac aagggaaaac cgcggggcca ataacgtttg atattgggct gtccgggtgt
     8161 accggttcta aggacaaaac aacaaaaatt tccaccgtct ttgtcggtaa tcaggtcacc
     8221 agtaacggta acctgggtaa tactggcagc gcgaaaaatg ttgaagtcca attactcgac
     8281 acttcagggg agccaatcaa tctgaccggc ggctttactg gcgacggcga cctacagctg
     8341 gaaccaaatg cttctgaagc gagcgcgact tataccgcgc ggtattactc taccgggaaa
     8401 gcagaggctg ggacagtcgc tgccacccta caatacgccg tttcgtataa ataattgtcg
     8461 ctacggtctg gcattgaaac gccagaccat tttcaatcgc cagggagttg ttgagatgaa
     8521 aatggatacc cgacattccg cattatatta cttaatagtt tttctattgc tggccctacc
     8581 cgccacagca tcgtgggcga gcgttactat tttgggtagc cgaataattt acccatcaac
     8641 agcctcctcc gtagatgtgc agttaaaaaa taatgatgca ataccttata tcgtacaaac
     8701 ctggtttgat gatggcgata tgaataccag cccggaaaat agcagcgcga tgccgtttat
     8761 tgccacgccg ccagtatttc gtattcaacc caaagcaggc caggtggtac gcgtaattta
     8821 taacaacaca aaaaaattgc cgcaggatcg tgaatcagta ttctggttta acgtattaca
     8881 ggtgccacca acgaatattg gcagcgacag cgggaaaaat aaaatgttgg tgatgctacg
     8941 ctcaagaata aagcttttct atcgtcctga cgggctaggt aaacctgata atctggcgaa
     9001 aaaactacag attaaaacgg taaataaggg ttctggaaaa agcggtattg ttatcgttaa
     9061 tccgcagccc tggtttgcct ctttaagtaa cctgaatgta aaagtgaacg gcgcttcgta
     9121 taacctggat gcagacatga ttgccccttt ttccagtcaa acctggtggc tgccgggcaa
     9181 acggtcactc aaatccttct ccggtacagt caccgttact ttggttaacg acctgggcgc
     9241 aaggataagc gagagctacg atgtccccca ccattaattt gaaccgcaaa agccttgcgc
     9301 tattgatcgc catagtttgc tcaggctccg cgcagggtga agagtattat tttgatcctg
     9361 cgctacttca gggggccact tacggacaaa atattgcccg ttttaatgaa cagcaaacgc
     9421 cttccggaga ctatcttgcc gacgtttacg ttaatggcac gctggtagcc tcgagcacta
     9481 atattcgatt taatgctgta aaagagggtc aacaggctga accctgcctg cccttatcgg
     9541 tgatgaaagc ggcacaaata aaatcactcc ccgagaccga cgctgcgacc gagtgtcgcc
     9601 cgctcaggga gtgggtacct catgccggct ggcaatttga tagcgccacg cttcgcctgt
     9661 tgctgacgat tccaatgacc gaacttacgc acaaaccgcg cggttatatc tccccttcag
     9721 agtgggatag cggcgcgctg gcgctgtttt tacgccataa cacaaactgg acccacaccg
     9781 aaaataccga tagccattat cgctaccaat acttatggag cggtttaaac atgggcgtta
     9841 acctcggact ttggcaggtc cgtcatcaaa gtaatctgcg ctatgccaat agcaaccaga
     9901 gcggaagcgc ctggcgctat aatagcgttc gaacctgggt gcaaagacct gtcgcatcta
     9961 ttaacagtat cctgtcgctg ggcgatagct atacggactc cagcttattc ggcagtctgt
    10021 cctttaacgg agttaagctt gtcaccgacg agcggatgcg ccctcagggc aaacgcggtt
    10081 atgcgccgga agttcggggc gtagcggcca gtagcgcgca cgtggtagta aaacaactgg
    10141 ggaaagtgat ttatgaaacc aacgttccgc cgggcccatt ttatattgac gatctgtaca
    10201 acacccgtta tcaaggcgat ctggaggtag aggttatcga ggccagcggt aaaacctcac
    10261 gtttcaccgt gccttattct tccgtgccgg attcggtacg tcccggtaac tggcactatt
    10321 cgctggcctt cggcagggtt cgtcagtact acgatattga aaatcgtttc tttgagggaa
    10381 cgttccagca cggcgttaat aacaccatta ccctcaacct cggttcacga attgcgcagc
    10441 gttaccaggc atggctggcg ggcggcgtct gggccaccgg tatgggcgcg ttcggcctta
    10501 acgccacctg gtcgaatgcg cgcgcagagc ataacgagcg ccaacaaggc tggcgcgcgg
    10561 aactcagtta cagcaaaacg tttaccaccg gcactaacct ggtactggcg gcttatcgtt
    10621 attcaaccaa cggctttcgc gatcttcagg acgtgctcgg cgtacgccgg gaagcaaaaa
    10681 cggggattga ttactactcc gacacgctgc atcaacgcaa tcgcctgtcc gcgacggtaa
    10741 gccagccgtt aggacggctt ggcacgctta acctcagcgc cagcaccgca gactactaca
    10801 ataaccaatc gcgtataaca cagctacaaa tggggtatag caaccagtgg cggaatataa
    10861 gctacggggt gaatatcgcg cgacagcgca ccacctggga ttacgatcgc ttttatcacg
    10921 gcgttaacga accactggac gtgagtagcc gacaaaaata taccgaaacc acaatgtcgt
    10981 ttaatgtctc tataccgctg gattggggcg aaaacagaac gtctgtcgct atgaattata
    11041 accagtccag tcaaagccgt tcctcaaccg tatccatgac cggcagtagc ggtgaaaaca
    11101 gcgacctgtc atggtcggtt tatggcggct acgagcgtta tcgcaatagt aatagcgata
    11161 gcagcgcgcc aacgacgttt ggcggtaatc tacaacaaaa cacccagttt ggcgcacttc
    11221 gcgccaacta tgaccagggt gataactatc gtcaggaagg actgggcgcg tccggcaccc
    11281 tggtactcca ccctggcggt ctgacggctg gcccctatac cagcgatacc tttgcgctta
    11341 ttcatgccga tggcgcgcag ggcgcgatcg tacaaaatgg ccagggcgct gtggttgatc
    11401 gctttggtta cgccattctg ccttcgttat ctccttaccg catcaataac gttacgctcg
    11461 acacccgtaa gatgcgcagc gatgccgaac tgacgggagg aagtcagcag attgtgccct
    11521 atgccggcgc catcgcgcgt gtcaatttcg ccactatcag cggcaaagcg gtgctgatct
    11581 ccgtgaagat gccggatggc ggcataccgc caatgggcgc tgatgttttc aacggtgaag
    11641 gcacaaacat cggcatggtc ggccagagtg ggcagattta tgcccgaatc gcccatccgt
    11701 cgggttctct actggtgcgc tggggaacag gggcaaacca gcgttgccgg gttgcctacc
    11761 aactcgatct tcacaccaaa gaaccgtttc tctatctgaa caaaatctgc gagaaggaat
    11821 agcacaatgc tttttagttt ccgaacgctc ttgtttatca ccagtctgtt cgtcagcgcc
    11881 ggaacatggt cgtcatgtat aaaagtcacc gataagagcg cgctctctga cgcggcgata
    11941 aaagcgggct acacggcgca aaactggatc ggcgcacttg acacgaatac gggtaatatc
    12001 ggtttgccaa cggtgattag catcagtaat agtgaaacat ttcaaccctc cggcacacta
    12061 ttggccagtg ggatcggtaa cttcctgacg gccgccaccg gaacgcccta ttccagtaaa
    12121 caggtacttt accgctgcga ttccgccgat gccgggaagc tctatgagat gtattcgaca
    12181 aatggcgata gcgcttttgc gggggcattt tttactcccg aagtagaagg cgcctattat
    12241 gatgtggagc gtaatgtcgc tgtccgtatg acaaacctca gtaccggcga atattacagc
    12301 cgcttctgga aagaacgcca acttaccgca gacagttggt ttcaggatga caaatatatt
    12361 tatattcctg ccagcgcgtt tagcaacgtg ttatatgaga tgtttaaaat tgactcaaga
    12421 aaatattttg cctaccagaa tccaatggac cgagatacct ggacgcagcc tcggggttat
    12481 atcgcgttta aaggcccagg cttgattacc gagcggatca aagcgggact ggatcatgcc
    12541 agcgattatt atggctggcc cagctattgg cccggggcat ggagtacata taatagcgtc
    12601 acctatgttc gcggcgcgtt atgtaaaatc acagattatc ctgcgatcgt gaaaattccc
    12661 cctgtcgccg tcggcatatt agccgccgga ggcaatagtc aggcgccttt ccacgtcagc
    12721 ctagaatgtg agtccggtgc cgtgtccagt gccctcccgt ccaccagcgc cgctaatgtc
    12781 gcaatggggt ttgtcgttaa tcaacccacc gccgtggcgg cggcgcgtcg cctggggcta
    12841 accacatctg caggcggtct gtcgtggcta ctggacaccc attatggcga acctggcgta
    12901 gcttccggag tgggtatccg catctataac gatgccggta cgccgattaa cctgttaccc
    12961 gatcggatca agacaggcac tggcaacgcc cgaggctggt atggctataa agatttaacc
    13021 acacgggtat catccggttc agtagaaacc tatagcggtg attttactgc ctcgcttgag
    13081 gcgctcggcg gacaaacagt aacggcagga agcgtgaatg cgcaattaca ggcagtggtt
    13141 agttttcagt aaagtcatat taacgctact tgggttgacg ggatggtatg gcccggcaca
    13201 agctgccgtt aatattgaca gaacccgaat tatttttgct tcagatgagg tcgctcaatc
    13261 gttgacatta tccaacgata atacaacgcc gatgctgtta caggtatgga ccgacgccgg
    13321 aaacattgac gcctctccgg ataacagcaa aacgccgctg gtggcgctgc cgccggtatt
    13381 taaaatgcag ccaggagaac tgagaacgct tcgcctgctc ctgagttccc gccagcagct
    13441 ggcaacggac cgggagagtc tcttctggct aaacatttat cagataccgc cagtcaccca
    13501 ggacattaaa aaccacccgc gaaaactggt gttaccgctt cgtttgaggc taaaaatttt
    13561 aattcgcccg actgggctaa aagcgcccac ggaagcggag gagaaaaaat tacgctttat
    13621 tgctaaagag aatactatac ggatagttaa ccccacctcg tggtatatga gtttaacgtt
    13681 aacgatggat aacaagaaaa gtatcggcga tatcatggtt gcgccgaaaa cagcacttga
    13741 tgtgccgcta acacgctcgc caacgccggg agcatcgata aattatgcag taatcaatga
    13801 ttccgggaac tggcgacaat ataccgccat actggaaaaa tatattagta agagtaattt
    13861 tattcctgag ttttgatggg aaatattcag ggatacgatc gtatccctga gacaggccag
    13921 aattcagcat gtaccattgt caaaaatagc attaagctga tattttactt tttgcacggc
    13981 atctttgttc tgttgagttc ccttctcctc aacagacata tcccatacgt ttttattatc
    14041 tgattcaatt aatgagtaga acgtattatt attacgcatc atataaccac gaaaattatt
    14101 ttcgatgccc gttgtcacag gcttggcagc ccctgaaata acagactccg tctctttatt
    14161 gaaaagctgg tattgaatat ttgcgcagtt taaatcacag ggggaacatt taagatttaa
    14221 aacaagcagt atcgtgttat tttcaaaaac aagggcataa tgattgctgg cagatgaaca
    14281 taacgggaat aacgcgagaa gaagaattat tatcaatttc atattattat atagactccg
    14341 tcaaagaaaa ctttcatttc acttgttctt ctgttaactc accctttcat ttcacgcccc
    14401 tgagaatagc gaaaggcata ccatgcagaa tgaatgcttt ccgaactgac gtcctcacag
    14461 acatccatac catgccaaac aagtacgcga gaaagaaaat gagaagattg ttatgaaaga
    14521 aaagtttgta accgcttgat tgagatggtg ccgataatag gagtcgaacc tacgaccttc
    14581 gcattacgaa tgcgctgctc taccaactga gctatatcgg ccctgagaag ggtgtgttca
    14641 cgcgggtgaa tcacggggta gaaggttaaa actaaccggg cggtgcgtca atagccttgc
    14701 tactcaaccg gctatttttg caccgctcgt cattaattac gcacgaatcg taccatcgcc
    14761 aaagcctatc cacttatagg tggtaagcgc ttcaagcccc atcggaccgc gggcatgtaa
    14821 tttctgcgtg ctgaccgcca cttctgcgcc aagcccaaac tgcccgccat cggtaaaacg
    14881 ggtagaggcg ttgacataaa ccgcagcgga atctacttcg ttcacgaaac gcgcagcatt
    14941 atgcatatcg cacgttaaaa tcgcatcgga gtgctgagtg ccatgttcgc gaatgtgggc
    15001 gatagcgcca tccatatttt cgaccaccac aacgttcaga tccagagaca gaaactcgtt
    15061 atccagctct tccggtttca gcgccaccag tttggcaggg ccatgcagtg cctgcatgac
    15121 ggtttcatcc ccatgcaacg ttacgccact ctccgccatc tgcttgctca gcgcaggcaa
    15181 aaagcgttct gcgatgtcct gatgcaccag caaggtttcc accgtgttac aggtgctcgg
    15241 gcgctgggtt ttagcgttga cgataatctt cagcgctggg gcgatgtctg cgctgctatc
    15301 gacaaaaata tggcacacgc caatcccgcc ggtaatcacc ggaatggtgg attgctcgcg
    15361 gcagagttta tgcaagcctg cgccgccgcg cgggatcagc atatcgatgt acttatccat
    15421 acgcagcatt tcactgacca gcgaacgatc cggattatca atcgcctgaa ccgccgcttc
    15481 cggtaaatcg caagctttca gcgccttctg aatgacaaga acggttgcgg cattcgtgcg
    15541 atgcgtctct ttcccaccgc gtagaatcac cgcattaccg gttttcagac acaaagaagc
    15601 cacatcaacg gtaacattcg gacgcgcctc atagataacg ccaaccacgc ccaacggcac
    15661 gcggc
//
LOCUS       DAGWFR010000089        15632 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.091, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000089 DAGWFR010000000
VERSION     DAGWFR010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 15632)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15632)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15632
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.091"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..2629
                     /gene="metH"
                     /locus_tag="MOX77_002842"
     CDS             <1..2629
                     /gene="metH"
                     /locus_tag="MOX77_002842"
                     /EC_number="2.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="methionine synthase"
                     /protein_id="HCA3358315.1"
                     /translation="DSLFVNVGERTNVTGSAKFKRLIKEEKYSEALDVARQQVESGAQ
                     IIDINMDEGMLDAEAAMVRFLSLIAGEPDIARVPIMIDSSKWEVIEKGLKCIQGKGIV
                     NSISMKEGVEAFIHHAKLLRRYGAAVVVMAFDEQGQADTRERKIEICRRAYKILLEEV
                     GFPPEDIIFDPNIFAVATGIEEHNNYAQDFIGACEDIKRELPHALISGGVSNVSFSFR
                     GNDPVREAIHAVFLYYAIRNGMDMGIVNAGQLAIYDNLPAELRDAVEDVILNRRDDGT
                     ERLLDLAEKYRGSKTDEAASAQQAEWRSWDVKKRLEYSLVKGITEFIEQDTEEARQQA
                     ARPIEVIEGPLMDGMNVVGDLFGEGKMFLPQVVKSARVMKQAVAYLEPFIEASKEKGS
                     SNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKILRTAREVNADLIG
                     LSGLITPSLDEMVNVAKEMERQGFTIPLLIGGATTSKAHTAVKIEQNYSGPTVYVQNA
                     SRTVGVVAALLSDTQRDDFVARTRKEYETVRIQHARKKPRTPPVTLEAARDNDLAFDW
                     ERYTPPVAHRLGVQEVEASIETLRNYIDWTPFFMTWSLAGKYPRILEDEVVGVEAQRL
                     FKDANDMLDKLSAEKLLNPRGVVGLFPANRVGDDIEIYRDETSTHVLTVSHHLRQQTE
                     KVGFANYCLADFVAPKLSGKADYIGAFAVTGGLKEDALADAFEAQHDDYNKIMVKAIA
                     DRLAEAFAEYLHERVRKVYWGYAPNESLSNDELIRENYQGIRPAPGYPACPEHTEKGT
                     IWQLLDVEKHTGMKLTESFAMWPGASVSGWYFSHPESKYFAVAQIQRDQVTDYAFRKG
                     MSVEDVERWLAPNLGYDAD"
     gene            2886..4517
                     /locus_tag="MOX77_002843"
     CDS             2886..4517
                     /locus_tag="MOX77_002843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na/Pi cotransporter family protein"
                     /protein_id="HCA3358316.1"
                     /translation="MLTLLHLLSAVALLVWGTHIVRTGVMRVFGARLRTVLSRSVEKK
                     PLAFCAGIGVTALVQSSNATTLLVTSFVAQDLVALTPALVIVLGADVGTALMARILTF
                     DLSWLSPLLIFIGVIFFLGRKQSRAGQLGRVGIGLGLILLALELIVQAVTPITQANGV
                     QVIFASLTGDIMLDALIGAMFAIISYSSLAAVLLTATLTAAGIISFPVALCLVIGANL
                     GSGLLAMLNNSAANAAARRVALGSLLFKLIGSLVILPFVHPLANLMDELPLPKSELVI
                     YFHVFYNLVRCLAMVPFAELMARFCKRIIRDEPELDTHLKPKHLDVSALDTPTLALAN
                     AAREVLRIGDAMEQMMEGLKKVMHGEPREEKALRKLADDVNVLYTAIKLYLARMPKDE
                     LAAEESRRWAEIIEMALNLEQASDIIERMGSEIADKSLAARRAFSEEGLKELDALYDQ
                     LLSNLQLAMSVFFSGDVTSARRLRRSKHRFRILNRRCSHAHVDRLHQQNVQSIETSSL
                     HLGLLGDMKRLNSLFCSVAYSVLEQPDQDEERGEY"
     gene            complement(4607..5296)
                     /gene="pepE"
                     /locus_tag="MOX77_002844"
     CDS             complement(4607..5296)
                     /gene="pepE"
                     /locus_tag="MOX77_002844"
                     /EC_number="3.4.13.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptidase PepE"
                     /protein_id="HCA3358317.1"
                     /translation="MELLLLSNSTLPGKAWLEHALPLIANQLNGRRSAVFIPFAGVTQ
                     TWDEYTDKTAEVLAPLGINVTGIHRVADPLAAIEKAEIVIVGGGNTFQLLKESRERGL
                     LAPVADRVKRGALYIGWSAGANLACPTIRTTNDMPIVDPNGFDALDLFPLQINPHFTN
                     ALPEGHKGETREQHIRELLVVAPELTVIGLPEGNWIQVSNGQAVLGGPNTTWVFKAGE
                     EAVALEAGHRF"
     gene            5368..5469
                     /locus_tag="MOX77_002845"
     CDS             5368..5469
                     /locus_tag="MOX77_002845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358318.1"
                     /translation="MAHDVARVTGNARSLKVTPGQICHLVSPEKLQV"
     gene            5504..6043
                     /locus_tag="MOX77_002846"
     CDS             5504..6043
                     /locus_tag="MOX77_002846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2058 domain-containing protein"
                     /protein_id="HCA3358319.1"
                     /translation="MAKLTLQEQLLQAGLVTSKKMAKVQRTAKKSRVQAREAREAVEE
                     NKKAQLERDKQLSEQQKQAVLAKEFKAQVKQLIEMNRINVSKGDIGFNFTDNNVIKKI
                     DVDKLTQTQLINGRLAIARLVINNSGECEYAIIPASVADKIAQRDADSIVVNSALSQE
                     EQDEDDPYADFKVPDDLMW"
     gene            6090..6959
                     /gene="rluF"
                     /locus_tag="MOX77_002847"
     CDS             6090..6959
                     /gene="rluF"
                     /locus_tag="MOX77_002847"
                     /EC_number="5.4.99.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(2604) synthase RluF"
                     /protein_id="HCA3358320.1"
                     /translation="MLTDTSTRLNKYISESGICSRREADRFIEQGNVFINGKRAAIGD
                     QVVAGDVVKVNGRLIEPREADDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRIFP
                     IGRLDKDSQGLIFLTNHGDLVNKILRAGNDHEKEYLVTVDKPITDEFIRGMGAGVPIL
                     GTVTKKCKVKKEAPFVFRITLVQGLNRQIRRMCEYFGYEVTKLERTRIMNVSLSGIPL
                     GEWRDLTDDELIDLFKLIEGSSSEAKPKAKAKPKTAGIKRPVVAIEKSNEKARPASSG
                     KRFTSPGRKKKGR"
     gene            complement(6956..7228)
                     /locus_tag="MOX77_002848"
     CDS             complement(6956..7228)
                     /locus_tag="MOX77_002848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3811 domain-containing protein"
                     /protein_id="HCA3358321.1"
                     /translation="MALPRITQKEMTEREQRELKTLLDRARIAHGRPLTNSETNSVKK
                     EYIDKLMALREAEAKKARQLKKKQAYKPDTEASFSWSANTPTRGRR"
     gene            complement(7291..8049)
                     /locus_tag="MOX77_002849"
     CDS             complement(7291..8049)
                     /locus_tag="MOX77_002849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001068167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HCA3358322.1"
                     /translation="MNPIKRRKHILDELNKFGEVTVIKLSEMLNVTSETIRRDLSLLE
                     SEGKITKIHGGAVKKQVVQEDAFSARIEAHREEKIAIGKLAAEMISERDTLFIDSCTT
                     NLILAEQLPPLAFSVITNSALIADKIKEHNLQARVYVLGGEYDYHFRANLGVSVCQQI
                     NAIHADICFIGAGGISPQHGVLVKSFEEAYVAKAMIAMSKKSVILADHTKFGQDGVMC
                     IASVKEIDNIITDKGFTSTGYTPQDFAGKLRIAD"
     gene            complement(8036..8899)
                     /locus_tag="MOX77_002850"
     CDS             complement(8036..8899)
                     /locus_tag="MOX77_002850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000924639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HCA3358323.1"
                     /translation="MLLITDLDGTLLTSQKTISPRTRQALIAFRQDGSLLAACSARPV
                     SSMVRLLHQQQVDRLFSWCAGFNCGHLLEMAGQRIIHAAPLSATDLWNIDQHISLSRY
                     HHHFFSAEAIHHRDDRLIAPWTTYEARLFGLPLITETTENIFNRRDIYKITLVAVSSE
                     IDTLCTEVNNHLPYGYYAVVTGENYIDIQRTDVNKGCIIEQLIHYLNISSDKVVVIGD
                     QQNDVSMFAAAGISIAMGNAPDAVKRQADYVTATNDEEGIVHALEWLRCLTHPVTMRQ
                     RLTAAKDNESN"
     gene            complement(8916..9755)
                     /locus_tag="MOX77_002851"
     CDS             complement(8916..9755)
                     /locus_tag="MOX77_002851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000472335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine biosynthesis protein"
                     /protein_id="HCA3358324.1"
                     /translation="MFKGDMNKKRAKALQKVKEAITLHGGQTILSTGITGDDARLAKA
                     VCEAGVKLLEPNHPALALARGHKGVSNMHAAEQIRHEITNSQMAEAVHGVRNVVPDDI
                     FITVGIAGGFTETLPVPLSETEILEIARAGADGLHTHKSDWDDLQDIVNLAHQYGLTV
                     DAYIGHPDDLHTFGIPARTPEEVASVAKRMQDIGVDMIGLMTGMSYEGVAAGDIPQMI
                     KDRLRALVGAVDVPTLAEGGINLANAKAFKDTGVNILVVGTAIDNMVCNAAKEAVTPF
                     IVH"
     gene            complement(9779..11359)
                     /locus_tag="MOX77_002852"
     CDS             complement(9779..11359)
                     /locus_tag="MOX77_002852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000716843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter"
                     /protein_id="HCA3358325.1"
                     /translation="MAIIGSSGGNLYNLGGAEPEKLLQEIYQQCEAAGVNVAAVQFIA
                     AEASMDVAKPDTPASVYALTTENQQKPQRIFQGKLSEVNTSVVESDRQIAEMIRRGEI
                     DGIVVMSADPVKANQAVFAAAVEMKTPIVGTGGTSMALVAAKGANVVATSGTTGTTSR
                     TRAVSFVASLCKHWGIKYKPQLGSASPSQSGSGKSLLKRFNIRSIMIPALPGFIAMAI
                     VLALSHIPGLEKLNDIFEILLKGLPVLVAVLAAKQISELDEVSIVAGVVAGVLSVEGG
                     LIGGIIGGVMAGIFVRWLFELCLNWRFPMTTVNIVAGGISGLAAGLIMHYLLSPLALS
                     AGNYIKLAIESTLAFSPILAGLLAGLVIWPAILGGVYHAVILPLVLLEMEKSGVSFLG
                     AVDMVGLVMVAAGINLANVIAPREKSEAAVATPGLLINLGFGTFVESAYPFMFANKIV
                     FGSAIFWAGMGGMMLGFFNVKGVAYVPAFASPFLSSNALQMAIVMIATMAMTCLTTII
                     ANRFKPVVQSESTTTAVN"
     gene            complement(11765..13114)
                     /gene="lysC"
                     /locus_tag="MOX77_002853"
     CDS             complement(11765..13114)
                     /gene="lysC"
                     /locus_tag="MOX77_002853"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine-sensitive aspartokinase 3"
                     /protein_id="HCA3358326.1"
                     /translation="MTEIVVSKFGGTSVADFDAMNRSADIVLSDANVRLVVLSASAGI
                     TNLLVALAEGMEPGERFATLDAIRKIQFDILDRLRHPNVIREEIERLLENITILAEAA
                     SLATSAALTDELVSHGELMSTLLFVEILRERDVQAHWFDVRKVMRTSDRFGRAEPDVA
                     ALAELAAQQLLPRLSETLVITQGFIGSESKGRTTTLGRGGSDYTAALLAEALHAARVD
                     IWTDVPGIYTTDPRVVPVAQRIDEIDFEEAAEMATFGAKVLHPATLLPAVRSDIPVFV
                     GSSKDPQAGGTLVCNKTQNPPLFRALALRRNQTLLTLHSLNMLHSRGFLAEVFGILAR
                     HNISVDLITTSEVSVALTLDTTGSTSTGDTLLTQSLLMELSALCRVEVEEGLALVALI
                     GNNLSKACGVGKEVFGVLEPFNIRMICYGASSHNLCFLVPGDDAEKVVQKLHQNLFE"
     gene            13503..15152
                     /gene="pgi"
                     /locus_tag="MOX77_002854"
     CDS             13503..15152
                     /gene="pgi"
                     /locus_tag="MOX77_002854"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HCA3358327.1"
                     /translation="MKNINPTQTSAWQALQKHYDEMKDVTIAELFANDSDRFAKFSAT
                     FDDLMLVDFSKNRITEETLAKLQDLAKETDLAGAIKSMFSGEKINRTEDRAVLHVALR
                     NRSNTPIIVDGKDVMPEVNAVLEKMKTFSQAIISGQWKGYTGKAITDVVNIGIGGSDL
                     GPFMVTEALRPYKNHLTMHFVSNVDGTHIAEVLKKVNPETTLFLVASKTFTTQETMTN
                     AHSARDWFLKSAGDEKHVAKHFAALSTNAKAVGEFGIDTANMFEFWDWVGGRYSLWSA
                     IGLSIILSVGFDNFVELLSGAHAMDKHFSTTPAEKNLPILLALIGIWYNNFFGAETEA
                     ILPYDQYMHRFAAYFQQGNMESNGKYVDRNGNAVDYQTGPIIWGEPGTNGQHAFYQLI
                     HQGTKMVPCDFIAPAITHNPLSDHHQKLLSNFFAQTEALAFGKSREVVEQEYRDQGKD
                     PAQLEHVVPFKVFEGNRPTNSILLREITPFSLGALIALYEHKIFTQGVILNIFTFDQW
                     GVELGKQLANRILPELGDDKAISSHDSSTNGLINRYKAWRA"
BASE COUNT         3743 a         4032 c         4168 g         3689 t
ORIGIN      
        1 cgatagcctg tttgtcaacg tcggcgaacg tactaacgtc accggctcgg ccaaatttaa
       61 acgcttgatc aaagaagaga aatacagcga agcgctggat gtcgcccgtc agcaggtcga
      121 aagcggcgcg cagattattg atatcaatat ggatgagggg atgctcgacg ccgaagcggc
      181 gatggtgcgt ttcctcagcc tgattgccgg tgagccggac attgcccgtg taccaatcat
      241 gattgactcc tccaaatggg aggttatcga aaaagggctg aagtgcattc agggtaaagg
      301 catcgtcaac tctatttcga tgaaagaggg cgtggaagcc tttattcatc atgcgaagtt
      361 gctacgtcgc tacggcgccg cagtggtggt gatggctttt gatgagcagg ggcaggccga
      421 cacccgcgaa cgtaaaatcg agatttgccg ccgcgcttac aaaattttgc tcgaagaggt
      481 aggctttccg ccggaagaca tcatcttcga cccgaatatc ttcgccgtcg ccaccggtat
      541 tgaagagcac aacaactacg cgcaggactt tatcggcgct tgtgaagaca tcaaacgcga
      601 gctgccgcac gcgctgatct ccggcggcgt gtctaacgtg tccttctcgt ttcgcggcaa
      661 cgacccggta cgtgaggcta tccacgcggt attcctctac tacgccatcc gcaacggcat
      721 ggacatgggc atcgtcaacg ccgggcaact ggcgatttat gacaacctgc ctgccgaact
      781 gcgcgatgca gttgaagatg tcattcttaa ccgtcgcgat gacggcaccg agcgtttgct
      841 ggatttggcg gagaaatatc gcggcagcaa aaccgacgag gctgccagtg cccagcaggc
      901 ggaatggcgt agctgggacg tgaaaaagcg tctcgaatac tcgctggtga aaggcattac
      961 cgagtttatc gaacaggata ccgaagaagc ccgtcagcag gccgcccgcc cgattgaggt
     1021 gattgaaggg ccgctgatgg acggcatgaa cgtggtcggc gacctgttcg gcgaagggaa
     1081 aatgttcctg ccgcaggtgg tgaaatccgc tcgcgtgatg aaacaagcgg tggcctacct
     1141 ggagccgttt attgaagcca gcaaagaaaa aggctccagc aacggcaaga tggtgattgc
     1201 caccgtgaag ggcgatgtgc acgacattgg caagaacatt gtcggcgtgg tgctgcaatg
     1261 caacaactac gaaatcgtcg atcttggcgt gatggtgcca gcggagaaaa tcctcagaac
     1321 ggcgcgtgaa gtgaatgccg atctgattgg tctttccggg cttatcaccc cgtcgctgga
     1381 cgaaatggtc aacgtggcga aagagatgga gcgtcagggc tttactatcc cgctactgat
     1441 cggcggcgca accacttcga aagcgcatac ggcggtgaaa atcgagcaga actacagcgg
     1501 tccgacggtc tacgtgcaga atgcttcgcg taccgtgggc gtggtggcgg cgctactctc
     1561 cgacacccag cgtgatgact ttgtcgcccg tacccgcaaa gagtacgaaa ccgtgcgtat
     1621 tcagcacgcc cgcaaaaaac cgcgcacgcc gccggtcacg ctggaagcgg cgcgcgataa
     1681 tgatctggca tttgattggg aacgctacac cccgccggta gcccaccgtc tgggcgtgca
     1741 ggaggtggaa gccagcatcg aaacgctgcg caactacatc gactggacgc cgttctttat
     1801 gacctggtcg ctggccggca aatacccgcg cattctggaa gatgaggtgg tgggcgttga
     1861 ggcgcagcgt ctgtttaaag acgccaatga tatgctggat aaactgagcg ccgagaaact
     1921 gttgaatccg cgtggcgtgg tgggcctgtt cccggcgaac cgtgtgggtg acgacatcga
     1981 aatctatcgc gacgaaacca gtactcatgt tctgacggtc agccaccacc tgcgccagca
     2041 gaccgagaaa gttggttttg ctaactactg tctggcggat tttgtcgcgc cgaaactgag
     2101 cggcaaagcg gactacatcg gtgctttcgc ggtgaccggc ggtctgaagg aggatgcgct
     2161 ggcggacgcc ttcgaagcgc aacacgacga ctataacaag atcatggtga aagcgattgc
     2221 cgaccgtctg gcggaagcgt ttgccgagta tctgcatgag cgtgtacgta aggtttactg
     2281 gggatatgcg ccgaacgaga gcctgagtaa cgacgaatta atccgcgaaa actaccaggg
     2341 gattcgcccg gcgccgggtt atcctgcctg cccggaacat accgaaaaag gcactatctg
     2401 gcagctactg gatgtcgaaa aacacaccgg gatgaagctc accgaatctt tcgccatgtg
     2461 gcctggcgcg tcggtctccg gctggtactt cagccatcct gagagcaaat acttcgcggt
     2521 agcgcagatc caacgcgatc aggtgacaga ttatgctttc cgtaaaggaa tgagcgttga
     2581 ggacgttgag cggtggctcg cgccgaacct gggttacgat gcggactgat tcataaaatc
     2641 gtcacttttc cttacaacat acaaggcact cattgggtgc cttgtctctt tcttacaatt
     2701 aaacccttat actgaaggaa ggctctacgc tgaatttgcc ggatggcggc gtaaacgcct
     2761 tatccagcat gtatggtaag cctggtggcg tgcaacgcca ccaggcctta acgctgtgcg
     2821 ccatcaggca atttatcgca agtgagcttc aggaaaacgt ataacgataa ggagaacctg
     2881 acgccgtgtt aactttgctc catctacttt ctgccgttgc gctgttggta tggggaacac
     2941 atatcgttcg tactggcgta atgcgcgtgt ttggcgcgcg tctacgcact gtcctcagcc
     3001 gcagcgtgga aaagaaaccg ctcgcctttt gtgcgggtat cggtgttacc gcgctggtac
     3061 aaagcagtaa cgccaccact ttattggtaa cgtcgtttgt cgcccaggat cttgtcgccc
     3121 tgacgccagc tctggtgatt gtgctgggcg ccgatgtggg tactgcgcta atggcgcgta
     3181 ttctcacctt tgatttgtcg tggctatcgc cgctgctgat ttttattggc gtgattttct
     3241 ttttgggacg taagcagtcc cgcgccgggc agctgggtcg cgtcggtatc gggcttggcc
     3301 tgattctact ggcgctggag ctgattgtgc aggcagtgac gccgatcact caagctaatg
     3361 gcgtgcaggt cattttcgcg tcgctgacgg gcgacattat gctggatgcg ctgattggcg
     3421 cgatgttcgc tattatcagt tattccagcc tggcggcggt gttgctgacg gcgaccctga
     3481 cggcggcggg gattatatcg ttcccggtgg cgttgtgcct ggtcatcggc gccaatctgg
     3541 gatcgggcct gttggcgatg ctcaacaaca gcgccgccaa tgctgccgcg cgtcgcgtag
     3601 cgctcggcag cctattgttc aaattgatcg gcagcctggt catcctgccg tttgtccatc
     3661 cgctggcgaa tttgatggat gagctaccgc taccgaaatc agagctggtg atctatttcc
     3721 acgttttcta taacctggtg cgctgcctgg cgatggtgcc atttgccgag ctgatggcgc
     3781 gtttttgtaa acgaattatt cgtgatgagc ctgaactgga tacccatctg aagccgaaac
     3841 atctggatgt cagcgcgctg gatacgccaa cgctggcgct ggctaatgct gcccgtgagg
     3901 tgttgcgcat tggcgatgcg atggaacaga tgatggaagg gctaaaaaag gtcatgcacg
     3961 gcgaaccgcg tgaagagaaa gcgctgcgca agctggcgga tgacgttaac gtgctctaca
     4021 ccgcgattaa gctttatctg gcgcgaatgc cgaaagacga gctggcggcg gaggagtccc
     4081 gccggtgggc ggagattatt gagatggccc tgaacctcga acaggcgtcg gatattatcg
     4141 agcgaatggg cagtgagatt gccgacaagt cgctggcggc gcgtcgggca ttttcagaag
     4201 aaggattgaa agagctggat gcgctttacg atcaactgct cagtaatctg caactggcga
     4261 tgtcggtctt tttctccggc gatgtcacca gcgcccgtcg gttgcgccgc agtaaacatc
     4321 gcttccgtat acttaatcgc cgatgctcac atgcgcatgt cgaccgcctg caccagcaga
     4381 acgtgcaaag tattgaaacc agctcgctcc atttagggct gctgggcgat atgaagcgtc
     4441 ttaactcact gttctgttcg gtcgcctata gcgtactgga acagccggat caggacgagg
     4501 aacggggcga gtattaagtg aaatgccgga tggcggtgta aacgtcttcc ggcctacgga
     4561 aaacatgcgc gtaggcccgc cattcggcat tcaatgtggc ctgggattaa aagcgatgac
     4621 ccgcttccag cgccacggcc tcttcgcccg ctttaaacac ccaggtggta ttcgggccgc
     4681 cgagaaccgc ttggccgttg ctcacctgaa tccagttgcc ttccggcaaa ccaatcactg
     4741 tcagttccgg cgcgaccacc agcagttcgc gaatatgctg ctcgcgggtc tcgcccttat
     4801 gaccctccgg caaggcgtta gtgaagtgag gattaatttg cagcgggaac agatccagcg
     4861 cgtcgaaacc gtttggatcg acgatcggca tatcgttggt cgtgcggata gtcgggcagg
     4921 caaggttggc gcccgcgctc cagccgatat acagcgcgcc gcgttttacc ctgtccgcca
     4981 ccggcgccag cagcccgcgt tcacgcgatt ctttcagtag ctggaaggta tttccgccgc
     5041 cgacaataac gatttccgct ttctcaatcg ccgcaagcgg atcggcgaca cgatgaatcc
     5101 ctgtgacgtt tatccctaat ggcgcaagca cctctgcggt tttatccgtg tactcgtccc
     5161 atgtttgcgt gacgccggca aacggaataa acacggctga gcgtcgaccg ttcaactgat
     5221 tcgctatcag cggcagagcg tgttccagcc aggctttacc cggcagcgtc gagttactta
     5281 ataaaagcag ttccattatt tctccacctc atcaggaaat gtcaaaacgt aataatgcta
     5341 ccattatcca tttaatgtct tactgatatg gctcatgatg ttgcgcgtgt tacaggcaac
     5401 gcgcggtcgc taaaagtgac gccaggccag atctgccatc tggtatcgcc tgaaaaatta
     5461 caggtataat ccgcaaaatt atttaacacg tttagagacg aaaatggcaa aactgacctt
     5521 acaagagcaa ctgctacaag cgggattagt gaccagcaaa aaaatggcca aagtccaacg
     5581 cacggctaaa aaatcacgcg ttcaggctcg tgaggccaga gaagcggtgg aagaaaataa
     5641 aaaggcgcaa cttgagcgtg ataaacaact cagtgaacag caaaaacaag cggttttagc
     5701 gaaagagttt aaagctcagg ttaagcaact tattgaaatg aatagaatca atgtatctaa
     5761 aggcgatatt ggttttaact tcaccgataa taacgtcatc aaaaaaatag acgtggataa
     5821 gcttacccag acacaactga ttaatgggcg tctcgcgatt gcgcgtctgg ttatcaataa
     5881 cagcggtgaa tgtgaatatg cgattattcc cgcgagcgtc gccgataaaa tcgcacaacg
     5941 agatgcggac agtattgtcg taaacagtgc gctgagtcag gaagagcagg acgaagatga
     6001 tccgtatgcc gattttaaag ttcctgacga tttgatgtgg taagtcacat tcccaacgtt
     6061 tatgtagaaa aatttctcag agagtaaata tgctgaccga cacatctacc cggcttaata
     6121 aatatatcag tgaaagcggc atctgttcgc gtcgcgaggc ggaccgtttt atcgaacagg
     6181 gcaatgtctt tatcaacggc aaacgcgccg ccattggcga tcaggtggtc gccggggatg
     6241 ttgttaaagt aaatggtcgg ttgattgagc cgcgagaagc ggatgattta gtgctgattg
     6301 cgctgaataa accggttggc attgtcagta ccactgaaga cggcgaacgc gacaatattg
     6361 tcgattttgt gaaccacagc aaacgtatct tcccgattgg tcgtctggat aaagactcgc
     6421 aggggctgat atttctgact aaccacggcg atctggtcaa taagattctg cgtgccggta
     6481 acgatcacga aaaagagtat ctggtgacgg tggataaacc gattaccgac gagtttattc
     6541 gcggtatggg cgctggcgtg ccgattctgg gtaccgtcac caaaaaatgt aaggtgaaaa
     6601 aagaggcgcc gtttgtcttt cgcattaccc tggtgcaggg attaaaccgt cagatccgtc
     6661 gtatgtgtga atactttggt tatgaagtga cgaaactgga gcgtacgcgc attatgaacg
     6721 tcagcctgag cgggattccg ctgggcgagt ggcgcgatct gacggacgat gagctgatcg
     6781 atctgtttaa attgattgag ggttcctctt ccgaagccaa accaaaggcc aaagcgaagc
     6841 cgaagaccgc gggtattaag cgaccggtcg tggcgatcga aaaaagcaat gagaaagcgc
     6901 gcccggcatc aagcggtaag cgctttacct cgccgggacg aaagaagaaa ggacgttaac
     6961 gtctgccgcg cgtcggcgta ttcgccgacc aggagaatga cgcttccgta tcgggtttat
     7021 acgcctgctt tttcttcaac tggcgggctt ttttcgcttc agcctcacgc agcgccatca
     7081 gcttatcgat gtactccttt tttacgctgt tggtctcaga attggtcagc ggacgcccgt
     7141 gcgcaatacg ggcgcggtcc agcaacgttt tcagttcgcg ctgttcgcgc tcggtcatct
     7201 ctttttgggt aatgcggggg agtgccatac gggtgccctc agttagccga tgcatttagt
     7261 ctacggcaat acgcaacggg cggatagcgc tcagtcagca atccgcagct ttccagcgaa
     7321 atcctgtggc gtataacccg ttgacgtaaa tcctttatcc gtgatgatgt tatcgatttc
     7381 ttttacgctt gcgatgcaca tcacaccgtc ctgaccaaat ttggtatggt cagcgagaat
     7441 cactgatttt ttgctcatcg caatcatggc tttggcaacg taggcttctt caaagctctt
     7501 caccaacacg ccatgctggg gagaaatgcc gccagcgcca ataaaacaga tatccgcgtg
     7561 aatcgcgtta atctgctgac ataccgagac gccgagatta gcgcgaaaat ggtaatcata
     7621 ttcgccgcct aatacataca cgcgggcctg caggttatgc tctttaattt tatcggcaat
     7681 cagtgctgaa ttggtaatca cggaaaaagc gagaggcggt aattgctcgg ccagaataag
     7741 gttagttgta caggaatcaa taaacaatgt atcccgttca ctgatcattt cggcggcaag
     7801 tttgccaatc gctattttct cttcgcgatg cgcctctatt cttgcgctaa acgcatcttc
     7861 ctggacaact tgctttttga ccgcgccccc atgaatctta gtgattttgc cttctgattc
     7921 cagtaaggag agatcgcgac gaatggtttc cgaggtgacg ttgagcattt ccgataattt
     7981 aataacggtg acttcaccga atttgtttaa ttcatcaaga atatgttttc gtcttttaat
     8041 tggattcatt atctttcgcc gctgtcaacc tttggcgcat ggtaactgga tgcgtaaggc
     8101 aacgcaacca ctccaacgca tggacgatac cctcctcatc attcgtggca gtcacatagt
     8161 cggcctgccg ctttactgca tccggcgcgt tgcccattgc gatgctgatt ccggcggcgg
     8221 caaacatgct gacatcattc tgctgatcgc caatcacgac caccttgtca gaagatatat
     8281 ttaaataatg aattaattgt tctattatgc accctttatt tacatcggtt ctttgaatat
     8341 caatataatt ttctcccgtg acgaccgcat aatatccata aggcaggtga ttattcactt
     8401 ctgtacacag tgtatctatc tccgaagata cggcaacaag ggtaatttta tatatatcgc
     8461 gacgattaaa gatattttct gtagtttcag ttataagcgg caacccaaat aagcgggctt
     8521 catatgttgt ccagggcgca atcagtctat cgtcacgatg gtgaattgct tcggcgctaa
     8581 aaaaatggtg gtgatagcgg gaaagagaaa tatgctggtc aatattccac agatctgtgg
     8641 cggacaacgg agcagcatga ataatgcgct gccccgccat ctccagaaga tgtccgcagt
     8701 taaaaccggc gcaccagcta aacaacctat caacctgttg ttggtgtagc aggcgtacca
     8761 ttgaggagac cggtctggcg gaacatgccg ccagcagact accgtcctgg cggaacgcaa
     8821 tcagcgcctg acgcgtgcgc gggctgattg ttttctgcga ggtgagtaat gttccatcca
     8881 gatcggtgat taacaacatc tctcgttccc tgatatcaat gaacaataaa cggcgtaacg
     8941 gcttctttgg cggcgttgca caccatgttg tcgatagccg taccgaccac cagaatattg
     9001 actccggtat ctttaaacgc tttcgcgttg gcgaggttaa tcccgccttc cgccagcgtc
     9061 ggaacatcca ccgcgccgac caacgcccgc aggcgatctt taatcatctg cgggatatcg
     9121 cctgccgcta cgccttcata gctcatgcct gtcatcagac caatcatatc cacgccgata
     9181 tcctgcatcc gcttcgccac gctggcgacc tcttccggcg tgcgtgcagg aataccgaaa
     9241 gtatgcagat cgtcaggatg gccaatgtag gcatcgacgg tcagaccata ttgatgggcg
     9301 agattaacga tgtcctgcag atcgtcccag tcggatttat gcgtatgtaa accgtcggct
     9361 ccagcgcggg caatctccag aatttccgtt tcgctgagcg gcaccggtaa ggtttcggta
     9421 aaaccgccgg cgataccaac ggtgataaaa atatcgtccg ggaccacatt acgaacaccg
     9481 tgtacggcct cagccatctg gctattggtg atttcgtgac gaatctgctc cgccgcgtgc
     9541 atgttgctca cgcctttgtg tccacgcgcc agcgccaacg cagggtggtt cggctccaga
     9601 agcttaacgc cagcctcaca cacggctttc gccaggcgcg catcgtcgcc agttattcct
     9661 gtgctgagga tagtttgccc accgtgaagc gtgatggctt ctttcacttt ctgtaacgct
     9721 ttggcgcgtt ttttattcat atcgccttta aacatggtgt acctctggtg ttggtgcatt
     9781 aattaacggc tgtcgttgtt gattcgctct gtacgacagg tttgaaacgg ttagcaataa
     9841 tggtggtaag gcaggtcatc gccattgtgg caatcattac gatggccatc tggagcgcat
     9901 tgctggataa gaacggtgag gcgaaagccg gaacataggc cacgcctttg acgttaaaaa
     9961 agcccagcat catgccgccc attccggccc aaaaaatggc ggagccaaaa acaattttgt
    10021 tggcgaacat gaagggatag gcggattcaa caaaggtgcc aaaacccagg ttaatgagca
    10081 ggcccggcgt agcaacggca gcttcgcttt tttcacgcgg ggcgatcaca ttggcaaggt
    10141 taatacctgc ggccaccatc accagaccga ccatatcgac cgcgccgagg aagctgacgc
    10201 cggatttttc catctccagc agtaccaacg gcaggatcac cgcgtgatag acgccgccga
    10261 gaatggcagg ccagataacc agaccagcca gcagcccggc aagaattggg ctgaatgcca
    10321 gcgtgctttc gatagccagt ttgatgtaat tacccgcaga tagcgccagc ggactcagca
    10381 gatagtgcat gattaaccca gcggcaaggc ccgatatccc accggcgacg atgttgacgg
    10441 tagtcattgg gaagcgccag ttcaggcaca gctcgaacag ccaacggacg aaaatccccg
    10501 ccattacacc gccgataatg ccgccgatca gtccgccctc tacggaaagc acgccagcga
    10561 cgaccccagc cacaattgaa acttcatcca gttcggaaat ctgttttgcc gccagtaccg
    10621 cgactaacac tggcagacct tttagtaata tttcaaagat atcgttaagt ttttccagtc
    10681 ctggtatgtg gctcagggcg agtacaatcg ccatggcgat aaagcctggt agcgcaggga
    10741 tcatgatgct acgaatgtta aaacgtttga gcaggctttt tccggaaccg ctctgcgagg
    10801 gcgaagcgct acccaactgt ggtttgtact tgatacccca atgtttacat agtgacgcca
    10861 cgaaggagac ggcgcgggta cggctggtgg tgccggttgt tccggaggtc gcgaccacat
    10921 tcgccccctt tgccgccacc agcgccatgg aggttccccc ggtgccgaca atcggtgttt
    10981 tcatctcaac ggcggcggca aaaacggctt ggttcgcctt taccggatcg gcgctcatta
    11041 ccacgatccc atcgatctca ccgcggcgga tcatctcagc gatttggcga tcgctttcta
    11101 ctaccgaggt gtttacctcc gaaagcttac cctgaaatat gcgctgtggt ttttgttggt
    11161 tttctgtggt taatgcataa accgatgccg gggtgtccgg tttggcgacg tccatcgagg
    11221 cctctgccgc gataaattgt acggcggcca cattcacgcc cgcagcctca cactgctgat
    11281 aaatctcctg gagtaacttc tctggctcgg cgccacccag gttgtagagg ttgcctccac
    11341 tgcttccaat aatcgcaatt ttttcatagc ggcctcaaat agggtaaggg ggttatctgt
    11401 gttgtagtgc aatcataatt ccaactaaaa caaaataaag caacaatgaa aaagtgcttt
    11461 tataccaaac gatctcaatt tttaaaggta agttattaaa atataatgat aaatttatgt
    11521 ttttgttttg tgttgttttg cgtggttttg tgacgaggtt caaaatgagg agggcataaa
    11581 taggggaaag ctgcccatat tgatgggacg agcagggtgt acagattcct gccttctgta
    11641 attggctttc tggagcagta ttccgccggc agtgcctgac gtgggaaccg ccggataagg
    11701 cgcttgcgtc gccatccggc agcgtattgc ctgatagcgc tcacccgctg tcgtgtcagg
    11761 gcgattattc aaataagttc tgatgtagct tttgcaccac tttctcggca tcgtctcccg
    11821 gcacgaggaa gcacagattg tggctggagg cgccgtaaca aatcatgcga atgttgaacg
    11881 gttccaggac gccaaacact tctttaccaa caccgcaggc ttttgacagg ttgttgccaa
    11941 tcagcgcgac cagcgccagt ccttcttcaa cttcgacccg acacagcgcg gaaagctcca
    12001 tcaataagga ttgggtcagt aacgtatcgc ccgtggaggt ggagccggta gtatccagcg
    12061 tcagcgcgac gctcacctcc gaagtggtaa tcagatctac cgaaatatta tgccgcgcca
    12121 gaatgccgaa cacctctgcc aggaaacctc gtgagtgcag catattcagg ctgtgcagcg
    12181 tcaatagcgt ttgattgcgg cgcagcgcca gcgcgcggaa cagcggcggg ttttgggttt
    12241 tattgcacac cagcgtaccg cccgcttgcg gatctttact ggagccaacg aagaccggga
    12301 tatcgctgcg cacggccggg agtaaggtgg ctggatgcag tacttttgcg ccgaaggttg
    12361 ccatctccgc cgcttcttca aagtcgattt catcaattcg ctgcgcgacg ggcactacgc
    12421 gcgggtcggt ggtgtaaata ccgggcacat ctgtccagat atcaacccgc gcggcgtgga
    12481 gcgcttcagc cagcaacgct gccgtatagt cgctgccgcc gcggcctaat gtcgtggtgc
    12541 ggcctttgct ttcactgccg ataaagccct gagtaatgac caacgtttcg ctcaggcgcg
    12601 ggagcaactg ctgcgcggcc agttccgcaa gcgctgcgac gtccggttcc gcacgaccaa
    12661 agcgatcgct ggtacgcatc actttgcgca cgtcgaacca gtgggcctgt acgtcgcgtt
    12721 cacgcaggat ctcaacaaat agcagggtag acattagctc gccgtggctg accagttcat
    12781 cggtcagggc tgccgatgtc gccagcgatg ccgcctccgc cagaatagtg atgttttcca
    12841 gcaggcgttc aatctcttcg cgaatgacat tcggatgacg cagacgatca aggatatcga
    12901 actggatttt acggatggcg tcgagcgtag cgaaacgttc gccgggctcc atcccttcgg
    12961 ccagcgccac cagcagatta gtgatgccgg cagacgcgga aagcacgact aaacgaacat
    13021 tggcgtcgga aagtacgata tccgcgctac ggttcatggc gtcaaaatca gcgacgctgg
    13081 taccgccaaa tttggaaaca acgatctctg tcatatcaac ctcgtgtcag gaaatgaaaa
    13141 acgcgaccat ggcacaaagg cagaacagaa accggtgcag gcgcaaatgc aagtaacgta
    13201 tttataaata aaagttgtgg actggactgt caacgttggg attatgcgga ttttttatgc
    13261 tgagtttagg ctcagtaaca gcgcttataa ccccgatacc cgtttgtagg aatgttggct
    13321 tatctatgcg cccggcgact cacccacttg ccgcctttct gcacctcgaa ttatttaggg
    13381 tatatacttt ttatcctcat tcgacagtgc ctggggcaac ggcactaaaa caatcacact
    13441 tttctgtgac tggcgttaca atcgatccca gtcacaattc tcaaatcaga agagtattgc
    13501 taatgaaaaa catcaatcca acgcagactt ctgcctggca ggcgctccag aaacactacg
    13561 acgaaatgaa agacgttacg atcgctgagc ttttcgcgaa cgatagcgac cgtttcgcta
    13621 aattttccgc gacgtttgac gatctgatgc tggtggactt ctccaaaaac cgcatcaccg
    13681 aagagacgct ggcaaaatta caggatctgg cgaaagagac cgatctggcc ggcgcgatta
    13741 aatccatgtt ctccggcgag aagatcaacc gcaccgaaga ccgcgccgtg ctgcacgtgg
    13801 cgctgcgtaa ccgtagcaat acgccgatca ttgtggacgg caaagatgtg atgccggaag
    13861 tgaacgccgt gcttgagaaa atgaaaactt tctcgcaagc gattatctcc ggtcagtgga
    13921 aaggctacac cggtaaggcc atcaccgacg tggtgaacat cggtatcggc ggttccgacc
    13981 tcggcccgtt catggtgacc gaagcgctgc gtccgtataa aaatcatctg actatgcact
    14041 tcgtctctaa cgttgatggt acccacatcg ctgaagtgct gaaaaaagtg aacccggaaa
    14101 cgactctgtt cctggtggcg tcgaaaacct tcaccacgca ggaaaccatg accaacgccc
    14161 acagcgcgcg cgactggttc ctgaaaagtg caggcgatga aaaacacgtg gcgaaacact
    14221 ttgctgcgct ctccaccaac gccaaagcgg tcggcgaatt tggtatcgac acggccaata
    14281 tgttcgagtt ctgggactgg gtcggcggtc gttactcgct gtggtctgcc atcggactgt
    14341 ccattattct gtccgtcggt ttcgacaact ttgtcgagct gctttccggc gcgcacgcga
    14401 tggacaagca tttctccacc actccggcgg agaaaaacct acccattctg ctggcgttga
    14461 ttggcatctg gtacaacaat ttcttcggcg cggaaaccga agccattctg ccgtacgacc
    14521 agtatatgca ccgtttcgcc gcctacttcc agcagggcaa catggaatcc aacggtaaat
    14581 acgttgaccg taacggcaac gccgtggatt accagacagg cccaattatc tggggcgaac
    14641 caggcaccaa cggtcagcac gcgttttatc aattgattca ccagggtact aaaatggtgc
    14701 cgtgtgactt tatcgccccg gctatcaccc ataacccgct atccgatcat catcagaagc
    14761 tgctgtctaa cttcttcgcg cagaccgaag cgctggcgtt tggtaaatcc cgcgaggtgg
    14821 ttgagcagga atatcgcgat cagggtaaag atccggcgca gcttgaacac gttgtgccat
    14881 tcaaagtgtt tgaaggcaac cgcccgacca actctatact gctgcgcgaa attacgccgt
    14941 tcagcctggg cgcgctgatt gcgttgtatg agcataaaat ctttacgcag ggcgtcatcc
    15001 tgaacatctt tactttcgac cagtggggcg ttgagttggg taaacagttg gctaaccgta
    15061 ttctgccgga gctgggcgat gataaagcta tttcgtccca tgatagctct actaacggtc
    15121 tgattaaccg ttataaagcc tggcgcgcct gatggcgctg cgcttatccg gtctacgtaa
    15181 tgcatagcgt ctgtaggccg gataaggcgt ttcgccgcca tccggcaaaa agagaataag
    15241 ataataaaaa ggccgatatt cacatcggct ttttttataa gataattccg cttgtccgtc
    15301 tttatcccca caattttata ttgagcttaa tcctaaaata agcaataacc agaaaatcac
    15361 tctgcgttat tttcagatta tacggatgct gatgtctttt agtttaattt taacttattt
    15421 attttatttg ttttttaatt aaataatata ggcgttactt ctttaaagtt taattatcct
    15481 aaaacctcgc tgttatttct cccggacata atccgcctgc tttggttgtg tatactcggt
    15541 agcgcccgaa attcttttgg gtaaatctcc attcattcaa tgaagggaaa ttatgatgaa
    15601 aaaagtactg tatggcattt ttgccataac cg
//
LOCUS       DAGWFR010000090        15595 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.092, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000090 DAGWFR010000000
VERSION     DAGWFR010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 15595)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15595)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15595
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.092"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..372
                     /gene="tuf"
                     /locus_tag="MOX77_002855"
     CDS             <1..372
                     /gene="tuf"
                     /locus_tag="MOX77_002855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312217.1"
                     /note="EF-Tu; promotes GTP-dependent binding of
                     aminoacyl-tRNA to the A-site of ribosomes during protein
                     biosynthesis; when the tRNA anticodon matches the mRNA
                     codon, GTP hydrolysis results; the inactive EF-Tu-GDP
                     leaves the ribosome and release of GDP is promoted by
                     elongation factor Ts; many prokaryotes have two copies of
                     the gene encoding EF-Tu; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HCA3358328.1"
                     /translation="GENVGVLLRGIKREEIERGQVLAKPGTIKPHTKFESEVYILSKD
                     EGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEMVMPGDNIKMVVTLIHPIAMDDGL
                     RFAIREGGRTVGAGVVAKVLG"
     gene            602..985
                     /gene="secE"
                     /locus_tag="MOX77_002856"
     CDS             602..985
                     /gene="secE"
                     /locus_tag="MOX77_002856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007665874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HCA3358329.1"
                     /translation="MSANTEAQGSGRGLEAMKWIVVAILLIVAIVGNYLYRDMMLPLR
                     ALAVVILIAAAGGVALLTTKGKATVAFAREARTEVRKVIWPTRQETLHTTLIVAAVTA
                     VMSLILWGLDGILVRLVSFITGLRF"
     gene            987..1532
                     /gene="nusG"
                     /locus_tag="MOX77_002857"
     CDS             987..1532
                     /gene="nusG"
                     /locus_tag="MOX77_002857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005280494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HCA3358330.1"
                     /translation="MSEAPKKRWYVVQAFSGFEGRVATSLREHIKLHNMEELFGEVMV
                     PTEEVVEIRGGQRRKSERKFFPGYVLVQMVMNDASWHLVRSVPRVMGFIGGTSDRPAP
                     ISDKEVDAIMNRLQQVGDKPRPKTLFEPGEMVRVNDGPFADFNGVVEEVDYEKSRLKV
                     SVSIFGRATPVELDFSQVEKA"
     gene            1690..2118
                     /gene="rplK"
                     /locus_tag="MOX77_002858"
     CDS             1690..2118
                     /gene="rplK"
                     /locus_tag="MOX77_002858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006121495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HCA3358331.1"
                     /translation="MAKKVQAYVKLQVAAGMANPSPPVGPALGQQGVNIMEFCKAFNA
                     KTDSIEKGLPIPVVITVYADRSFTFVTKTPPAAVLLKKAAGIKSGSGKPNKDKVGKIS
                     RAQLQEIAQTKAADMTGADIEAMTRSIEGTARSMGLVVED"
     gene            2122..2826
                     /gene="rplA"
                     /locus_tag="MOX77_002859"
     CDS             2122..2826
                     /gene="rplA"
                     /locus_tag="MOX77_002859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HCA3358332.1"
                     /translation="MAKLTKRMRVIREKVDATKQYDINEAIALLKELATAKFNESVDV
                     AVNLGIDARKSDQNVRGATVLPHGTGRSVRVAVFTQGPNAEAAKAAGAELVGMEDLAD
                     QIKKGEMNFDVVIASPDAMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKAGQ
                     VRYRNDKNGIIHTTIGKVDFDADKLKENLEALLVALKKAKPSQAKGVYIKKVSISTTM
                     GAGVAVDQAGLSASAN"
     gene            3242..3739
                     /gene="rplJ"
                     /locus_tag="MOX77_002860"
     CDS             3242..3739
                     /gene="rplJ"
                     /locus_tag="MOX77_002860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002438625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HCA3358333.1"
                     /translation="MALNLQDKQAIVAEVSEVAKGALSAVVADSRGVTVDKMTELRKA
                     GREAGVYMRVVRNTLLRRVVEGTQFECLKDTFVGPTLIAYSMEHPGAAARLFKEFAKA
                     NAKFEVKAAAFEGELIPASQIDRLATLPTYEEAIARLMATMKEASAGKLVRTLAAVRD
                     AKEAA"
     gene            3806..4171
                     /gene="rplL"
                     /locus_tag="MOX77_002861"
     CDS             3806..4171
                     /gene="rplL"
                     /locus_tag="MOX77_002861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005122872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HCA3358334.1"
                     /translation="MSITKDQIIEAVSAMSVMDVVELISAMEEKFGVSAAAAVAVAAG
                     PAEAAEEKTEFDVILKAAGANKVAVIKAVRGATGLGLKEAKDLVESAPAALKEGVSKD
                     DAEALKKSLEEAGAEVEVK"
     gene            4489..8517
                     /gene="rpoB"
                     /locus_tag="MOX77_002862"
     CDS             4489..8517
                     /gene="rpoB"
                     /locus_tag="MOX77_002862"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004870488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HCA3358335.1"
                     /translation="MVYSYTEKKRIRKDFGKRPQVLDVPYLLSIQLDSFQKFIEQDPE
                     GQYGLEAAFRSVFPIQSYSGNSELQYVSYRLGEPVFDVQECQIRGVTYSAPLRVKLRL
                     VIYEREAPEGTVKDIKEQEVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSD
                     KGKTHSSGKVLYNARIIPYRGSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNYTTE
                     QILDLFFEKVVFEIRDNKLQMELIPERLRGETASFDIEANGKVYVEKGRRITARHIRQ
                     LEKDDIKHIEVPVEYIAGKVVSKDYVDESTGELICAANMELSLDLLAKLSQSGHKRIE
                     TLFTNDLDHGPYISETVRVDPTNDRLSALVEIYRMMRPGEPPTREAAESLFENLFFSE
                     DRYDLSAVGRMKFNRSLLRDEIEGSGILSKDDIIDVMKKLIDIRNGKGEVDDIDHLGN
                     RRIRSVGEMAENQFRVGLVRVERAVKERLSLGDLDTLMPQDMINAKPISAAVKEFFGS
                     SQLSQFMDQNNPLSEITHKRRISALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEG
                     PNIGLINSLSVYAQTNEYGFLETPYRRVVDGVVTDEIHYLSAIEEGNYVIAQANSNLD
                     DEGHFVEDLVTCRSKGESSLFSRDQVDYMDVSTQQVVSVGASLIPFLEHDDANRALMG
                     ANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKRGGTVQYVDASRIVIKVNEDE
                     MYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPVERGDVLADGPSTDLGELALGQ
                     NMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVSRDTKLGPEEITADIPN
                     VGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVK
                     DSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDLSEELQILEAGLF
                     SRIRAVLVSGGVEAEKLDKLPRDRWLELGLTDEEKQNQLEQLAEQYDELKHEFEKKLE
                     AKRRKITQGDDLAPGVLKIVKVYLAVKRRIQPGDKMAGRHGNKGVISKINPIEDMPYD
                     ENGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQEVAKLREFIQ
                     RAYDLGADVRQKVDLSTFSDDEVLRLAENLRKGMPIATPVFDGAKEAEIKELLKLGDL
                     PTSGQITLFDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGK
                     AQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMP
                     ESFNVLLKEIRSLGINIELEDE"
     gene            8594..12817
                     /gene="rpoC"
                     /locus_tag="MOX77_002863"
     CDS             8594..12817
                     /gene="rpoC"
                     /locus_tag="MOX77_002863"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HCA3358336.1"
                     /translation="MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETI
                     NYRTFKPERDGLFCARIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERM
                     GHIELASPTAHIWFLKSLPSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLERQQIL
                     TEEQYLDALEEFGDEFDAKMGAEAIQALLKSMDLEQECETLREELNETNSETKRKKLT
                     KRIKLLEAFVQSGNKPEWMILTVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRN
                     NRLKRLLDLAAPDIIVRNEKRMLQEAVDALLDNGRRGRAITGSNKRPLKSLADMIKGK
                     QGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIYGKLELRGLAT
                     TIKAAKKMVEREEAVVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLH
                     PLVCAAYNADFDGDQMAVHVPLTLEAQLEARALMMSTNNILSPANGEPIIVPSQDVVL
                     GLYYMTRDCVNAKGEGMVLTGPKEAERIYRAGLASLHARVKVRITEYEKDENGEFVAH
                     TSLKDTTVGRAILWMIVPKGLPFSIVNQALGKKAISKMLNTCYRILGLKPTVIFADQT
                     MYTGFAYAARSGASVGIDDMVIPEKKHEIISEAEAEVAEIQEQFQSGLVTAGERYNKV
                     IDIWAAANDRVSKAMMDNLQTETVINRDGQEEQQVSFNSIYMMADSGARGSAAQIRQL
                     AGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTR
                     RLVDVAQDLVVTEDDCGTHEGILMTPVIEGGDVKEPLRDRVLGRVTAEDVLKPGTADI
                     LVPRNTLLHEQWCDLLEANSVDAVKVRSVVSCDTDFGVCAHCYGRDLARGHIINKGEA
                     IGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGSIKLSNVKSVVNSSGK
                     LVITSRNTELKLIDEFGRTKESYKVPYGAVMAKGDGEQVAGGETVANWDPHTMPVITE
                     VSGFIRFTDMIDGQTITRQTDELTGLSSLVVLDSAERTTGGKDLRPALKIVDAQGNDV
                     LIPGTDMPAQYFLPGKAIVQLEDGVQISSGDTLARIPQESGGTKDITGGLPRVADLFE
                     ARRPKEPAILAEIAGIVSFGKETKGKRRLVITPVDGSDPYEEMIPKWRQLNVFEGERV
                     ERGDVISDGPEAPHDILRLRGVHAVTRYIVNEVQDVYRLQGVKINDKHIEVIVRQMLR
                     KATIESAGSSDFLEGEQVEYSRVKIANRELEANGKVGATFSRDLLGITKASLATESFI
                     SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAAGEQ
                     PATPQVTAEDASASLAELLNAGLGGSDNE"
     gene            12859..13182
                     /locus_tag="MOX77_002864"
     CDS             12859..13182
                     /locus_tag="MOX77_002864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358337.1"
                     /translation="MLDTEFRVACLQGKKMPAIISLIYLMFSLLVFTKKITISNVLSA
                     FLLFLSLYILHHKSLLIFIYCLIIIVATAILHRVKTSADKKAVFYFSMPCWLLVLSVI
                     ININE"
     gene            complement(13188..13532)
                     /locus_tag="MOX77_002865"
     CDS             complement(13188..13532)
                     /locus_tag="MOX77_002865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytoplasmic protein"
                     /protein_id="HCA3358338.1"
                     /translation="MLQKKPNPMVKNFNFEYCGFSTFITPVDGVGGILAKWLSNKHNV
                     SVPTPYTFGQDPIPGINLYRNTKAKFVMANGGNSLPCAISKYNAKTGQFIHITSDNDF
                     SPIIRETRVMKK"
     gene            13986..14201
                     /locus_tag="MOX77_002866"
     CDS             13986..14201
                     /locus_tag="MOX77_002866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017466138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358339.1"
                     /translation="MDKNDQQTRLEEGPPAKLQSGTLPENFKFTAISIIQWPAPGRQL
                     LMKGRRLGKNEEGIICPGQLPLLTMTK"
     gene            complement(14282..15415)
                     /gene="thiH"
                     /locus_tag="MOX77_002867"
     CDS             complement(14282..15415)
                     /gene="thiH"
                     /locus_tag="MOX77_002867"
                     /EC_number="4.1.99.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-iminoacetate synthase ThiH"
                     /protein_id="HCA3358340.1"
                     /translation="MKAFTDRWRQLEWDDIRLRINGKTAADVERALNASRLNREDMMA
                     LLSPAAADYLEPMAQRAQRLTRQRFGNTVSFYVPLYLSNLCANDCTYCGFSMSNRIKR
                     KTLDEVDIQRECDAIRKLGFEHLLLVTGEHQAKVGMDYFRRHLPTIRRQFSSLQMEVQ
                     PLSQENYAELKTLGIDGVMVYQETYHEAIYAQHHLKGKKQDFFWRLETPDRLGRAGID
                     KIGLGALIGLSDNWRVDCYMVAEHLLWMQKHYWQSRYSVSFPRLRPCTGGVEPASVMD
                     EKQLVQTICAFRLLAPEIELSLSTRESPWFRDHVIPLAINNVSAFSKTQPGGYADDHP
                     ELEQFSPHDDRRPEVVASALSAQGLQPVWKDWDSWLGRASQMR"
     gene            complement(15412..>15595)
                     /locus_tag="MOX77_002868"
     CDS             complement(15412..>15595)
                     /locus_tag="MOX77_002868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HCA3358341.1"
                     /translation="GADAVLVNTAIAVADDPVMMATAFRLAVEAGLLARQAVPGNRST
                     YASATSPLTGFLEALA"
BASE COUNT         3824 a         3907 c         4214 g         3650 t
ORIGIN      
        1 ggtgagaacg taggtgttct gctgcgtggt atcaaacgtg aagaaatcga acgtggtcag
       61 gtactggcta agccgggcac catcaagccg cacactaagt tcgaatctga agtgtacatt
      121 ctgtccaaag atgaaggcgg ccgtcatact ccgttcttca aaggctaccg tccgcagttc
      181 tacttccgta ctactgacgt gactggtacc atcgaactgc cggaaggcgt agagatggta
      241 atgccgggcg acaatatcaa aatggttgtt accctgatcc acccgatcgc aatggacgac
      301 ggtctgcgtt tcgcaatccg tgaaggcggc cgtactgttg gcgcgggcgt tgttgctaaa
      361 gttctcggct aatcgctgat aacatttgac gcaatgcgca ataaaagggc atcatttgat
      421 gccctttttg cacgctttca caccagaacc tggctcatca gtgattttat ttgtcataat
      481 cattgctgag acaggctctg tagagggcgt ataatccgaa aggcgaataa gcgtttcgat
      541 ttggtttgcc tcgcgattgc ggggtgaaaa tgtttgtaga atacttctga caggttggtt
      601 tatgagtgcg aataccgaag ctcaagggag cgggcgcggc ctggaagcga tgaagtggat
      661 agttgttgcc atattgctga tcgtcgcaat cgtcggcaac tacctctatc gcgacatgat
      721 gctgccgctg cgtgcgctgg ccgtagtaat tctgattgct gcagcgggtg gtgtcgcgct
      781 gttgacgaca aaaggtaaag caaccgttgc ttttgcccgt gaagcgagaa ccgaagtccg
      841 taaggtcatt tggccgactc gccaggaaac gctgcacacc acgctgatcg tcgctgcggt
      901 taccgcagtt atgtcactga tcctgtgggg actggatggt attctggttc gcctggtatc
      961 ctttatcact ggcctgaggt tctgagatgt ctgaagcacc taaaaagcgc tggtacgtcg
     1021 ttcaggcgtt ttccggtttt gaaggccgcg tagccacatc gctgcgcgag catatcaaat
     1081 tacacaatat ggaagagctg tttggcgaag tcatggtgcc gactgaagaa gtcgttgaga
     1141 tccgtggcgg ccagcgtcgc aaaagcgaac gcaaattctt cccgggttac gttctggtcc
     1201 agatggtcat gaacgacgca agctggcacc tggtgcgcag cgtgccgcgt gtgatgggct
     1261 ttatcggcgg tacctctgac cgtccggcgc cgatcagcga caaagaagtc gatgcgatca
     1321 tgaaccgcct gcagcaggtt ggcgataagc cgcggccgaa aacgttgttt gaaccgggtg
     1381 aaatggttcg tgttaacgac ggtccgttcg cagactttaa cggcgttgtc gaagaagtcg
     1441 attatgagaa gtctcgcctg aaagtgtctg tttctatctt cggtcgtgcg accccggtag
     1501 agctggactt cagccaggtt gagaaagcgt aaggctgcga tcaaaaaagc agcgatctaa
     1561 tcgttgcata gggcgcaaaa ttgacataca atttcgcgcc ttttgttttt atgggcctta
     1621 tgcccataaa gcgatattta tcacggggag cttctttgaa gcgatactac ccaattcgag
     1681 gaatttagaa tggctaagaa agtacaagcc tatgtcaagc tgcaggttgc agctggtatg
     1741 gcgaacccga gtccgccggt tggtccagca ctgggtcagc agggtgtgaa catcatggaa
     1801 ttctgcaaag cgttcaacgc aaaaacggat tccatcgaaa aaggtctgcc gattccggtt
     1861 gttattaccg tttacgctga ccgttctttc accttcgtta ccaaaacgcc tccggcagct
     1921 gttctgctga aaaaagcggc tggtatcaag tctggttccg gcaagccgaa caaagacaaa
     1981 gtaggtaaaa tttcccgcgc tcagctgcag gaaatcgcgc agaccaaagc tgccgacatg
     2041 accggtgccg acattgaagc gatgactcgc tccatcgaag gtactgcacg ttccatgggc
     2101 ctggtagtgg aggactaaga aatggctaaa ctgaccaagc gtatgcgcgt gatccgtgaa
     2161 aaagttgatg cgaccaaaca gtacgacatc aacgaagcta ttgccctgtt gaaagagctg
     2221 gccactgcta aattcaacga aagcgttgac gttgccgtta acctcggcat cgacgctcgt
     2281 aaatctgacc agaacgttcg tggcgcgact gtactgccgc acggtactgg ccgttctgtt
     2341 cgcgttgccg tatttaccca gggcccgaac gctgaagcag ctaaagctgc tggcgctgag
     2401 ctggtaggta tggaagatct ggctgaccag atcaagaaag gcgaaatgaa cttcgacgtt
     2461 gttatcgcat ccccggatgc aatgcgcgtt gttggccagc tgggccaggt tctgggtccg
     2521 cgcggcctga tgccaaaccc gaaagtcggt accgtaacgc cgaacgttgc tgaagcggtt
     2581 aagaacgcta aagcaggtca ggttcgttac cgtaacgaca aaaacggcat catccacacc
     2641 accatcggta aagtggactt tgacgctgac aaactgaaag aaaacctgga agctctgctg
     2701 gttgcgctga aaaaagcaaa accgagccag gcgaaaggcg tgtacatcaa gaaagttagc
     2761 atctccacca ccatgggtgc tggcgttgcc gttgatcagg ctggtctgag cgcatctgcg
     2821 aactaagatt agtctttacg tgggcggtga ttttgtctac aatcttaccc ccacgtattc
     2881 tgctagttgc agacgtatat ccgaggtatt cgggttgtga caaggcggca acttagtgag
     2941 tcgccaggag catagttaac tatgtgactg gtgcgaacga aggaagccaa cgccgtcaca
     3001 agctgaatag cgacggatag aaaagatttg ttcgttggag cctggcctat ccaggcctcc
     3061 gtcgaagacc gcaggcgtct cgcaagaggc ttaatcccct gcgtagacgg tgacagaacg
     3121 ctaagattat ttttgatact ctggcttgtt tctgctcacc gtattaagac gctcttctcg
     3181 ttgagatgag tgaagtgagt tccggaacat gagttccggc aaacatccag gagcaaagct
     3241 aatggcttta aatcttcaag acaaacaagc gattgttgct gaagtcagcg aagtagccaa
     3301 aggcgcgctg tctgcagtag ttgcggattc ccgtggcgta actgtagata aaatgactga
     3361 actgcgtaaa gcaggtcgtg aagctggcgt atacatgcgt gttgttcgta acaccctgct
     3421 gcgccgcgtc gttgaaggta ctcagttcga gtgcctgaaa gacacgtttg ttggtccgac
     3481 cctgattgca tactctatgg aacacccggg cgctgctgct cgtctgttca aagagttcgc
     3541 gaaagcgaat gcaaaatttg aggtcaaagc tgcagccttt gaaggtgagc tgatcccggc
     3601 gtctcagatc gaccgcctgg caactctgcc gacctacgaa gaagcaattg cacgcctgat
     3661 ggcaaccatg aaagaagctt cggctggcaa actggttcgc acactggctg ctgtacgcga
     3721 tgcaaaagaa gctgcgtaat cgcagttgtc tttatcaagc atttgcttac gtataaactt
     3781 attctgatat tcaggaacaa tttaaatgtc tatcactaaa gatcaaatca ttgaagcagt
     3841 atccgctatg tccgtaatgg acgttgtaga actgatttct gcaatggaag aaaaattcgg
     3901 tgtttccgct gctgctgctg tagctgtagc tgctggcccg gctgaagctg ctgaagaaaa
     3961 aactgaattc gacgtaattc tgaaagctgc tggcgctaac aaagttgctg ttatcaaagc
     4021 agtacgtggc gcaactggcc tgggtctgaa agaagctaaa gacctggtag aatctgctcc
     4081 ggccgctctg aaagaaggcg tgagcaaaga tgacgctgaa gcactgaaaa aatctctgga
     4141 agaagctggc gctgaagttg aagttaaata agccaaccct tccggttgca gcctgagaaa
     4201 tcaggctgat ggctggtgac tttttagtca ccagcctttt tgcgctgtaa ggcgccagta
     4261 gcgtttcaca ctgtttgact actgctgtgc ctttcaatgc ttgtttctat cgacgactta
     4321 atatactgcg acagagcgta cgttctgtgt aaatcgcaat gaaatggttt aagcgtgata
     4381 gcaacaggca ttgcggaaag tatccatttt ccggtcaaca aaatagtgtt gcacaaactg
     4441 tcccccgcag gacagatggg tcgacttgtc agcgagctga ggaaccctat ggtttactcc
     4501 tataccgaga aaaaacgtat tcgtaaggat tttggtaaac gtccacaagt tctggatgta
     4561 ccttatctcc tttctatcca gcttgactcg tttcagaagt ttatcgagca agatcctgaa
     4621 gggcagtacg gcctggaagc agccttccgt tccgtgttcc cgattcagag ctacagcggt
     4681 aattccgagc tgcagtacgt cagctaccgc cttggcgaac cggtgtttga cgttcaggaa
     4741 tgtcagatcc gtggcgtgac ctattccgca ccgctgcgcg taaaactgcg tctggtgatc
     4801 tacgagcgcg aagcgccgga aggcaccgtt aaagacatta aagaacaaga agtctacatg
     4861 ggcgaaattc cgctcatgac cgacaacggt acctttgtta tcaacggtac tgagcgtgtt
     4921 atcgtttctc agctgcaccg tagtccgggc gtcttctttg actccgacaa aggtaaaact
     4981 cactcttcgg gtaaagtgct gtataacgcg cgcatcattc cttaccgtgg ttcctggctg
     5041 gacttcgaat tcgatccgaa ggacaacctg ttcgtgcgta tcgaccgtcg ccgtaaactg
     5101 cctgcgacca tcatcctgcg tgcgctgaac tacaccactg agcagatcct tgacctgttc
     5161 tttgagaaag tcgtcttcga aattcgcgac aacaagctgc agatggagct gattccagaa
     5221 cgtctgcgcg gcgaaaccgc gtcgttcgat atcgaagcta acggcaaggt gtacgttgaa
     5281 aaaggccgtc gcattaccgc gcgtcatatc cgtcagctgg aaaaagacga tatcaagcat
     5341 atcgaagttc cggttgagta catcgcaggt aaagtcgtct ctaaagacta cgttgacgaa
     5401 tctactggcg agctgatctg cgcggcgaac atggagctga gcctggatct gctggctaag
     5461 ctgagccagt ccggccacaa gcgtatcgaa acgctgttta ccaacgatct ggaccacggc
     5521 ccgtacattt ctgaaacggt acgcgtcgat ccaactaacg atcgtctgag cgcgctggta
     5581 gaaatctacc gcatgatgcg ccctggtgag ccgccgacac gcgaagcggc tgaaagcctg
     5641 tttgagaacc tgttcttctc cgaagaccgc tatgacctgt ctgcggtggg tcgtatgaag
     5701 ttcaaccgtt ctctgctgcg cgacgaaatc gaaggttccg gtatcctgag caaagacgac
     5761 atcattgatg tcatgaagaa gctcatcgat atccgtaacg gtaaaggcga agtggatgat
     5821 atcgaccacc tcggcaaccg tcgtatccgt tccgtcggcg aaatggcgga aaaccagttc
     5881 cgcgttggcc tggtgcgtgt agagcgtgcg gtgaaagagc gtctgtctct gggcgatctg
     5941 gataccctga tgcctcagga tatgatcaac gccaagccga tttccgccgc agtgaaagag
     6001 ttctttggtt ccagccagct gtctcagttt atggaccaga acaacccgct gtctgagatt
     6061 acgcacaaac gtcgtatctc cgcactcggc ccaggcggtc tgacccgcga acgcgcaggc
     6121 ttcgaagttc gagacgtaca cccgacgcac tacggtcgcg tatgtcctat cgaaacgccg
     6181 gaaggtccga acatcggtct gatcaactcc ctgtccgtgt acgcacagac taacgaatat
     6241 ggcttccttg agacgccgta ccgtcgtgtg gttgatggcg tggttactga cgaaattcat
     6301 tacctgtctg ctatcgaaga aggcaactac gttatcgctc aggcgaactc caacctggat
     6361 gacgaaggcc actttgtaga agatctggta acctgccgta gcaaaggcga atccagcttg
     6421 ttcagccgcg accaggttga ctacatggac gtttccaccc agcaggtggt ctccgtcggt
     6481 gcgtccctga tcccgttcct ggaacacgat gacgccaacc gtgcattgat gggtgcgaac
     6541 atgcaacgtc aggcggttcc gactctgcgt gctgataagc cgctggtggg taccggtatg
     6601 gaacgtgctg tcgccgtcga ctccggtgtt actgcagtag ctaaacgtgg cggtactgtt
     6661 cagtacgtgg atgcatcccg tatcgttatc aaagttaacg aagacgagat gtacccgggt
     6721 gaagcaggta tcgacatcta taacctgacc aaatacaccc gctctaacca gaacacctgt
     6781 atcaaccaga tgccatgtgt gtctctgggc gagccggttg aacgcggcga cgtgctggca
     6841 gacggtccgt ccaccgacct cggtgaactg gcgctcggtc agaacatgcg cgtggcgttc
     6901 atgccgtgga acggctacaa cttcgaagac tccatcctcg tttccgagcg tgttgtccag
     6961 gaagaccgtt tcaccaccat ccacattcag gaactggcgt gcgtgtcccg tgacaccaag
     7021 ctggggccgg aagagatcac cgctgacatc ccgaacgtgg gtgaagctgc gctctccaaa
     7081 ctggatgaat ccggtatcgt ttacatcggc gcggaagtga ctggcggcga cattctggtc
     7141 ggtaaggtaa cgccgaaagg tgaaacccag ctgacgccgg aagagaaact gctgcgtgcg
     7201 atcttcggtg agaaagcgtc tgacgttaaa gactcttctc tgcgcgtacc taacggtgtc
     7261 tccggtacgg ttatcgacgt tcaggtcttt actcgcgatg gcgtagaaaa agacaaacgt
     7321 gctctggaaa tcgaagagat gcagctcaag caggcgaaaa aagacctgtc tgaagaactg
     7381 cagatcctcg aagcgggcct gtttagccgt atccgtgcgg tgttggtgtc cggcggcgtt
     7441 gaagctgaga agctcgacaa actgccgcgc gaccgctggc tggaactcgg tctgaccgac
     7501 gaagagaaac aaaatcagct ggaacaactg gctgagcagt atgacgaact gaaacacgag
     7561 ttcgagaaaa aacttgaagc gaagcgccgt aaaatcaccc agggcgacga tctggcgccg
     7621 ggcgtgctga agatcgtgaa ggtctatctg gccgttaaac gccgtatcca gccgggtgat
     7681 aagatggcag gtcgtcacgg taacaagggt gttatctcta agatcaaccc gatcgaagac
     7741 atgccttacg atgaaaacgg cacgccggta gacatcgtac tgaacccgct gggcgtaccg
     7801 tctcgtatga acatcggtca gattctggaa acccacctgg gtatggctgc gaaaggtatt
     7861 ggcgacaaga ttaacgccat gctgaaacag cagcaggaag tcgcgaaact gcgcgaattc
     7921 atccagcgtg cctacgatct gggcgccgac gttcgtcaga aagtcgacct gagcaccttc
     7981 agcgatgatg aagtgctgcg tctggcagaa aacctgcgca aaggtatgcc gattgccaca
     8041 ccagtgttcg acggtgcgaa agaagcggaa atcaaagagc tgctgaaact gggcgacctg
     8101 ccgacctccg gtcagatcac cttgttcgat ggccgtacgg gtgaacagtt cgaacgtccg
     8161 gtaaccgtcg gttacatgta catgctgaaa ctgaaccacc tggttgatga caagatgcat
     8221 gcgcgttcta ccggttctta cagcctggtt actcagcagc cgctgggtgg taaggcgcag
     8281 ttcggtggtc agcgcttcgg ggagatggaa gtgtgggcgc tggaagctta cggcgccgcc
     8341 tacaccctgc aggaaatgct caccgttaag tctgatgacg tgaacggtcg taccaagatg
     8401 tataagaaca tcgtggacgg caaccatcag atggaaccgg gtatgccgga atccttcaac
     8461 gttctgttga aagagatccg ctcgctgggc atcaacatcg aactggaaga cgagtaattc
     8521 tcgctcaaac aggtcactgg tgtcggggta aaacccgaca ccagattgtg ctaactccga
     8581 cgggagcaaa tccgtgaaag atttattaaa gtttctgaaa gcgcagacta aaaccgaaga
     8641 gtttgatgcg atcaaaattg ctctggcttc gccagacatg atccgttcat ggtctttcgg
     8701 tgaagttaaa aagccggaaa ccatcaacta ccgtacgttc aaacctgagc gtgacggcct
     8761 tttctgcgcc cgtatctttg ggccggtaaa agactacgag tgcctgtgcg gtaagtacaa
     8821 gcgcctgaaa caccgtggtg ttatttgtga gaagtgcggc gttgaagtga cccagaccaa
     8881 agtacgccgt gagcgtatgg gccacatcga gctggcgtct ccgactgctc acatctggtt
     8941 cctgaaatcg ctgccgtccc gtatcggtct gctgctcgat atgccgttgc gtgatatcga
     9001 acgcgtactg tacttcgaat cttatgtggt tatcgaaggc ggtatgacca acctggaacg
     9061 tcaacagatc ctgactgaag agcagtatct ggacgcgctg gaagagttcg gtgacgaatt
     9121 cgacgcgaag atgggtgcgg aagctatcca ggccctgctg aagagcatgg atctggagca
     9181 agagtgtgaa actctgcgcg aagagctgaa cgaaaccaac tccgaaacta agcgtaaaaa
     9241 gctgaccaag cgtatcaaac tgctggaagc cttcgtacag tctggcaaca agccagagtg
     9301 gatgatcctg accgttctgc cggttctgcc gccagatctg cgtccgctgg ttccgctgga
     9361 tggtggtcgt ttcgccacgt cagatctgaa cgatctgtat cgtcgcgtga tcaaccgtaa
     9421 caaccgtctg aaacgtctgc tggatctggc tgcgccggac atcatcgtac gcaacgaaaa
     9481 acgtatgctg caggaagcgg tcgacgccct gctggataac ggtcgtcgcg gtcgtgcgat
     9541 caccggttct aacaaacgtc ctctgaaatc tttggccgac atgatcaaag gtaagcaggg
     9601 tcgtttccgt cagaacctgc tcggtaagcg tgttgactac tccggtcgtt ctgtaatcac
     9661 cgtaggtcca tacctgcgtc tgcatcagtg cggtctgccg aagaaaatgg cgctggagct
     9721 gttcaaaccg ttcatctacg gcaaactgga actgcgagga ctcgccacca ctatcaaagc
     9781 cgcgaagaaa atggttgagc gcgaagaagc tgtcgtttgg gatatcctgg acgaagtgat
     9841 ccgcgaacac ccggtactgc tgaaccgtgc accaacactg caccgtttgg gtatccaggc
     9901 atttgaaccg gtactgatcg aaggtaaagc tatccagctg cacccgctgg tttgtgcggc
     9961 atataacgcc gacttcgatg gtgaccagat ggctgttcac gtaccgctga cgctggaagc
    10021 ccagctcgaa gcgcgtgcgc tgatgatgtc taccaacaac atcctgtctc cggcgaacgg
    10081 cgaacctatc atcgttccgt ctcaggacgt ggtattgggt ctgtactaca tgacccgtga
    10141 ctgtgttaac gccaaaggcg aaggcatggt gctgactggc ccgaaagaag ctgagcgtat
    10201 ctatcgcgca ggtctggcct ctctgcatgc gcgcgttaaa gtgcgtatca ctgaatatga
    10261 aaaagatgaa aacggcgaat tcgttgcgca caccagcctg aaagacacga ccgttggtcg
    10321 cgccattctg tggatgatcg taccgaaagg tctgcctttc tccatcgtca accaggcgct
    10381 gggcaagaaa gcgatctcca aaatgctgaa cacttgctac cgtattctgg gcctgaaacc
    10441 gaccgttatt tttgcggacc agacgatgta caccggcttt gcttatgcag cgcgttcagg
    10501 tgcgtccgtt ggtattgatg acatggtcat cccggagaaa aaacacgaga tcatctctga
    10561 agcggaagcc gaagttgctg agatccagga gcagttccag tctggtctgg taaccgctgg
    10621 cgaacgctat aacaaagtta tcgatatctg ggctgcggcg aacgatcgtg tatccaaagc
    10681 gatgatggat aacctgcaaa ccgaaaccgt gattaaccgt gacggccagg aagagcagca
    10741 ggtttccttc aacagcatct acatgatggc cgactccggt gcgcgtggtt ctgcggcaca
    10801 gattcgtcag ctggcaggta tgcgtggtct gatggcgaag ccagatggct ccatcatcga
    10861 aacgccaatc accgcgaact tccgtgaagg tctgaacgta ctccagtact tcatctccac
    10921 gcacggtgcg cgtaaaggtc tggcggatac cgcactgaaa accgcgaact ccggttatct
    10981 gacccgtcgt ctggttgacg tcgcgcagga tctggtggtg accgaagatg actgtggtac
    11041 gcacgaaggt atcctgatga ccccggttat cgagggtggc gacgtgaaag agccgctgcg
    11101 tgaccgcgtt ctgggtcgtg tgacggcgga agatgtgctg aagccgggta cggcggacat
    11161 tctggttcca cgcaacacgc tgctgcacga acagtggtgt gacctgctgg aagcaaactc
    11221 cgttgacgcc gttaaagtgc gttccgttgt atcctgcgat accgattttg gtgtatgtgc
    11281 gcactgctat ggtcgtgacc tggcgcgtgg ccacatcatc aacaaaggtg aagctatcgg
    11341 cgttatcgcg gcacagtcca tcggtgaacc gggtacacag ctgacgatgc gtacgttcca
    11401 catcggtggt gcggcatcgc gtgcggctgc tgaatccagc atccaggtta agaacaaagg
    11461 tagcatcaag ctcagcaacg tgaagtcggt tgtgaactcc agcggtaaac tggttatcac
    11521 ttcccgtaac accgaactga agctgatcga cgaattcggt cgtaccaaag agagctataa
    11581 agtgccttat ggcgcagtca tggcgaaagg tgatggcgag caggttgccg gcggcgaaac
    11641 cgtggcaaac tgggacccgc acaccatgcc ggttatcacc gaagtgagtg gtttcatccg
    11701 cttcactgac atgatcgacg gtcagaccat tacgcgtcag accgacgaac tgaccggttt
    11761 gtcttcgctg gtggttctgg attcggctga acgtactacc ggtggtaaag atctgcgtcc
    11821 ggcgctgaaa atcgttgatg ctcagggtaa tgacgttctg atcccgggta ccgatatgcc
    11881 tgcgcagtac ttcctgccgg gtaaagcgat tgtacagctg gaagatggcg tacagatcag
    11941 ttctggtgac accctggcgc gtattccgca ggaatccggc ggtaccaagg atatcaccgg
    12001 tggtctgccg cgcgttgccg atctgttcga agcgcgtcgt ccgaaagagc cggccattct
    12061 ggcggaaatc gcaggtatcg tttccttcgg taaagaaacc aaaggcaaac gtcgcctagt
    12121 gattacgccg gttgatggta gtgacccgta cgaagagatg attccgaaat ggcgtcagct
    12181 caacgtgttc gaaggggaac gtgtagaacg tggtgatgtg atttccgatg gtccggaagc
    12241 gccgcacgac attctgcgtc tgcgtggcgt tcatgctgtg acgcgttata ttgttaacga
    12301 agttcaggat gtataccgtc tgcagggcgt taagattaac gataaacaca tcgaagttat
    12361 cgttcgtcag atgctgcgta aagcgaccat cgaaagcgcc ggtagttccg acttcctgga
    12421 aggcgaacag gttgaatact ctcgcgtcaa gatcgctaac cgcgagctgg aagcgaacgg
    12481 caaagtgggg gctaccttct cccgcgatct gctgggtatt accaaagcgt ctctggcaac
    12541 cgagtcgttc atctctgccg catcgttcca ggagaccacg cgtgtcctga ccgaagcagc
    12601 cgttgcgggt aaacgcgacg aactgcgcgg cctgaaagag aacgttatcg tgggtcgtct
    12661 gattccggcc ggtaccggtt atgcgtacca ccaggatcgt atgcgccgtc gcgccgcggg
    12721 cgagcagcca gcaacaccgc aggtcactgc ggaagatgca tctgcaagcc tggcagagct
    12781 gctgaacgca ggtctgggcg gttctgataa cgagtaatcg ttaaatggtg gaggggtatt
    12841 tatccctcca ccagcttcat gctggatacc gaattccggg tcgcttgcct acaaggaaag
    12901 aaaatgccag cgattatttc attaatctat ttaatgttta gtcttttagt atttacaaaa
    12961 aagataacca tttcaaacgt tctgtccgct tttttattgt ttctatcgtt atatatactt
    13021 caccataaat cattacttat atttatttat tgtcttatta ttattgtcgc caccgctatt
    13081 cttcatcgag tcaaaaccag cgcggataaa aaagccgtat tttatttttc aatgccatgc
    13141 tggctcttgg ttttatctgt aattataaat attaatgaat aaatgaatta ttttttcatg
    13201 actcttgttt ctcgtattat tggtgaaaaa tcattatcac tggttatatg aataaactgt
    13261 ccagtttttg cattatattt tgatatcgca cagggaagac tattaccacc gttagccata
    13321 acaaattttg cttttgtatt acgataaaga ttgatgccag gaatggggtc ctgaccgaat
    13381 gtataaggcg ttgggacact tacattatgt ttgtttgaga gccactttgc taaaatcccg
    13441 ccaacgccat caaccggcgt aataaaagta gagaatccac aatactcaaa attgaaattt
    13501 tttaccattg ggtttggttt tttctgtaac atttagtcca aatgtgactt taaatttatc
    13561 ccataaatct aagttattaa agtctattgg ctcgccatta taaaatgcct gctgttcata
    13621 cattaaatga taaacctgtt ttattgattg tttacgcggg acattttaaa tcattaaatg
    13681 aaggattcaa ttccattaag gtctttaggc cgaaaaaaca cacagacgac tttataatcg
    13741 gataatgcac caatcccaga tgtccgagga tgtagtgcgt ataggtaaaa tgatatgtat
    13801 tatctcagac ctgatctgac agttaccggt tatttataca gatatctgtc agattacatc
    13861 tggcttaaat ttttctcagc ccagatgcgt tttccatcaa gtaacgttac catcggcgtc
    13921 cggccgcaac acatttttcc ctgatgggtt cgcccctgat tcccgttgtt ctggggcatc
    13981 attttatgga caaaaacgat cagcagacac ggttggaaga ggggccgcca gcgaaattac
    14041 agtcaggaac gctgcccgaa aacttcaagt tcaccgctat ttcgataatc cagtggccag
    14101 cccccggtcg tcagttactg atgaagggga gaaggctggg caaaaatgag gaagggataa
    14161 tttgccctgg tcagcttccg ttgctgacga tgacaaaata aaaaacggga ggccgataac
    14221 aatctcccgt ttttcacatt acgtactcgc tcgtgaaata ttaatgcgtt tacatacggg
    14281 ttcaccgcat ttgcgaagcg cgccccagcc aactgtccca gtctttccat acgggctgta
    14341 acccttgcgc gcttaacgcg cttgcaacga cttctggccg acggtcatcg tggggagaaa
    14401 actgctccag ttccggatga tcgtcagcgt agccaccggg ctgggttttc gagaaggcgc
    14461 tgacgttgtt gattgccaga ggaatcacat ggtctcgaaa ccacggcgat tcgcgggtgg
    14521 agagtgataa ttcaatttct ggcgccagta aacgaaacgc gcaaatcgtt tgcaccagtt
    14581 gcttttcatc catcacagat gcgggttcca caccgccggt acacggacgc agacgcggga
    14641 aggaaacaga atagcgactc tgccaatagt gtttctgcat ccacaacaga tgctccgcca
    14701 ccatatagca atccacccgc cagttgtccg acagaccaat tagcgcgcca agaccgattt
    14761 tgtcgatacc tgcccggcct aaccgatccg gcgtttccag ccgccagaaa aagtcctgtt
    14821 tctttccctt caggtgatgc tgtgcataga ttgcctcatg gtaagtttcc tgataaacca
    14881 tcacgccatc gatccccagc gttttgagct ccgcgtagtt ttcttgcgac aagggctgga
    14941 cttccatctg taaagaggaa aattgacggc ggatggtggg taaatgacgg cgaaaatagt
    15001 ccatgccgac tttggcctga tgctcgccgg tgactaacag cagatgctca aaacccagtt
    15061 tacggatagc atcgcactcc ctttgaatat ccacctcatc cagcgtctta cgcttgatgc
    15121 ggttgctcat agagaagccg cagtaggtgc agtcgttggc acagaggttt gagagataga
    15181 gcggcacgta gaaactgacg gtgttgccaa agcgttgtcg ggtcagcctt tgtgcccgct
    15241 gcgccatcgg ttccagataa tcggcggcgg cgggggagag caacgccatc atatcctcgc
    15301 ggttgaggcg tgaagcattc agcgcccgct ccacatcggc ggcggtttta ccgttgatgc
    15361 gcaggcgaat atcgtcccac tccagttgcc gccaacggtc ggtgaaggct ttcatgctaa
    15421 cgcctccaga aatccggtga gcgggctggt agcgctggcg taggtgctac gattacccgg
    15481 caccgcctga cgcgccagta atccggcttc caccgccaga cggaaagcgg ttgccatcat
    15541 caccggatcg tccgccacgg caatcgccgt gttgaccagc accgcatcag cgccc
//
LOCUS       DAGWFR010000091        15442 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.093, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000091 DAGWFR010000000
VERSION     DAGWFR010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 15442)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15442)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15442
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.093"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(48..1334)
                     /gene="surA"
                     /locus_tag="MOX77_002869"
     CDS             complement(48..1334)
                     /gene="surA"
                     /locus_tag="MOX77_002869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase SurA"
                     /protein_id="HCA3358342.1"
                     /translation="MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDG
                     LMQSVKLNAGQAGQQLPDDATLRHQILERLIMDQIILQMGQKMGVKITDEQLDQAIAN
                     IAKQNNMTMDQMRSRLAYDGLNYSTYRNQIRKEMIISEVRNNEVRRRITVLPQEVDAL
                     AKQIGTQNDASTELNLSHILIALPENPTSEQVNDAQRQAESIVEEARNGADFGKLAIT
                     YSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGQ
                     SQSISVTEVHARHILLKPSPIMNDQQARLKLEEIAADIKSGKTTFAAAAKEYSQDPGS
                     ANQGGDLGWATPDIFDPAFRDALTKLHKGQISAPVHSSFGWHLIELLDTRKVDKTDAA
                     QKDRAYRMLMNRKFSEEAATWMQEQRASAYVKILSN"
     gene            complement(1388..3742)
                     /gene="lptD"
                     /locus_tag="MOX77_002870"
     CDS             complement(1388..3742)
                     /gene="lptD"
                     /locus_tag="MOX77_002870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly protein LptD"
                     /protein_id="HCA3358343.1"
                     /translation="MKKRIPTLLATMIASALYSHQGLAADLASQCMLGVPSYDRPLVK
                     GDTNDLPVTINADNAKGNYPDDAVFTGNVDIMQGNSRLQADEVQLHQKQAEGQPEPVR
                     TVDALGNVHYDDNQVILKGPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGEN
                     RYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKVGPVPIFYSPYLQL
                     PVGDKRRSGFLIPNAKYTTKNYFEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEF
                     RYLTQAGAGLMELDYLPSDKVYEDEHPKEGDKHRWLFYWQHSGVMDQVWRFNVDYTKV
                     SDSSYFNDFDSKYGSSTDGYATQKFSVGYAVQNFDATVSTKQFQVFNDQNTSSYSAEP
                     QLDVNYYHNDLGPFDTRIYGQAVHFVNTKDNMPEATRVHLEPTISLPLSNRWGSLNTE
                     AKLMATHYQQTNLDWYNANNSKKLEDSVNRVMPQFKVDGKLVFERDMAMLAPGYTQTL
                     EPRVQYLYVPYRDQSGIYNYDSSLLQSDYNGLFRDRTYGGLDRIASANQVTTGVTTRI
                     YDDAAVERFNVSVGQIYYFTESRTGDDNIKWENDDKTGSLVWAGDTYWRISERWGLRS
                     GVQYDTRLDSVATSSSSLEYRRDQDRLVQLNYRYASPEYIQATLPSYYSTAEQYKNGI
                     NQVGAVASWPIADRWSIVGAYYFDTNSSKPADQMLGLQYNSCCYAIRVGYERKLNGWD
                     NDKQHAIYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPYQSSM"
     gene            3996..4808
                     /gene="djlA"
                     /locus_tag="MOX77_002871"
     CDS             3996..4808
                     /gene="djlA"
                     /locus_tag="MOX77_002871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone DjlA"
                     /protein_id="HCA3358344.1"
                     /translation="MQYWGKIIGVAVALMMGGGFWGVVLGLLVGHMFDKARSRKMAWF
                     ANQRERQALFFATTFEVMGHLTKSKGRVTEADIHIASQLMDRMNLHGDSRTAAQNAFR
                     VGKADNYPLREKMRQFRSVCFGRFDLIRMFLEIQIQAAFADGSLHPNEREVLYVIAEE
                     LGISRVQFDQFLRMMQGGAQFGGGYHQQSGGGWQQAQRGPTLEDACNVLGVKTTDDAT
                     TIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQKAYELIKEQKGFK"
     gene            complement(4903..5562)
                     /gene="rluA"
                     /locus_tag="MOX77_002872"
     CDS             complement(4903..5562)
                     /gene="rluA"
                     /locus_tag="MOX77_002872"
                     /EC_number="5.4.99.28"
                     /EC_number="5.4.99.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA pseudouridine(32) synthase/23S
                     rRNA pseudouridine(746) synthase RluA"
                     /protein_id="HCA3358345.1"
                     /translation="MGMENYNPPQEPWLVILYQDEHIMVVNKPSGLLSVPGRLEAHKD
                     SIMTRIQRDYPQAESVHRLDMATSGVIVVALTKAAERELKRQFREREPKKQYVARVWG
                     HPSPAEGLVDLPLICDWPNRPKQKVCYETGKPAQTEYNVVEFAADNTARVVLKPITGR
                     SHQLRVHMLALGHPILGDQFYASPEALSLAPRLQLHAEMLTITHPAYGNSMTFKVPAD
                     F"
     gene            complement(5574..8480)
                     /gene="rapA"
                     /locus_tag="MOX77_002873"
     CDS             complement(5574..8480)
                     /gene="rapA"
                     /locus_tag="MOX77_002873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001117023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-associated protein RapA"
                     /protein_id="HCA3358346.1"
                     /translation="MPFTLGQRWISDTESELGLGTVVAMDARTVTLLFPSTGENRLYA
                     RSDSPVTRVMFNPGDTITSHEGWQLHIDEVKEENGLLVYVGTRLDTEETNVTLREVLL
                     DSKLVFSKPQDRLFAGQIDRMDRFALRYRARKFQSEQYRMPYSGLRGQRTNLIPHQLN
                     IAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVE
                     MLRRFNLRFALFDDERYTEAQHDAYNPFETEQLVICSLDFARRNKQRLEHLCDAEWDL
                     LVVDEAHHLVWSTDAPSREYMAIEQLAERVPGVLLLTATPEQLGMESHFARLRLLDPN
                     RFHDFEQFVEEQKNYRPVADAVAMLLAGNKLSNDELNRLGDLIGEQDIEPLLQAANSD
                     RDDAQAARDELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTVKLPLPTQYQTAIKV
                     SGIMGARKSAEDRARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTSHRSQKVLV
                     ICAKATTALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIG
                     SEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRW
                     YHEGLDAFEHTCPTGRAIYDSAYASLINYLAAPEETDGFDDLIKSCREQHEALKAQLE
                     QGRDRLLEINSNGGEKAQQLAQSIEEQDDDTNLIAFAMNLFDIVGINQDDRGDNLIVL
                     TPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWEHPLIRNGLDLILSGDTGS
                     STISLLKNKALPVGTLLVELVYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQV
                     EFETFNRQLSAVNRHTGSKLVNAVQQDVHAILQLGETQIEQSARALIDNARREADEKL
                     SGELSRLEALRAVNPNIRDDELAAIDSNRQQVLESLNQAGWRLDALRLIVVTHQ"
     gene            complement(8654..11005)
                     /gene="polB"
                     /locus_tag="MOX77_002874"
     CDS             complement(8654..11005)
                     /gene="polB"
                     /locus_tag="MOX77_002874"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase II"
                     /protein_id="HCA3358347.1"
                     /translation="MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQATLAPQESVAF
                     IPTSQTSRAASLLQAEKDYRLTPLQLRDFHRQPVSGLYCRTHRQLMRMEKLLRENGVT
                     VYEADVRPPERYLMERFITSPVWVDGEMRNGVIRNARLKPHPDYRPPLKWVSLDIETT
                     RHGELYCIGLEGCGQRTVYMLGPANGDERQLDFELVYVASRPQLLEKLNAWFAEHDPD
                     VIIGWNVVQFDLRMLQKYAERYRIPLRLGRDNSELEWREHGFKNGVFFAQARGRVIID
                     GIDALKSAFWNFSSFSLEAVSQELLGEGKSIDNPWDRMDEIDRRFAQDKPALATYNLK
                     DCELVTRIFHKTEIMPFLLERATINGLPVDRHGGSVAAFGHLYFPRMHRAGYIAPNLG
                     EVPPLASPGGYVMDSQPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGMAQPDPEHS
                     TEGFLDAWFSREKHCLPEIVSQIWHGRDEAKRQGNKPLSQALKIIMNAFYGVLGTTAC
                     RFFDPRLASSITMRGHAIMRQTKALIEAQGYDVIYGDTDSTFVWLRRAHSEADAAEIG
                     HRLVRHVNEWWAQTLQQQNLTSALELEFETHFCRFLMPTIRGADTGSKKRYAGLIQEG
                     DSQRMVFKGLETVRTDWTPLAQRFQQELYLRVFRNEPYQDYVRETIDKLMAGELDAQL
                     VYRKRLRRPLHEYQRNVPSHVRAARLADEQNLKQGRPAQYQNRGAIKYVWTVNGPEPV
                     DYQQSPLDYEHYLTRQLQPVAEGILPFVEDNFATLLTGQLGLF"
     gene            complement(11049..11279)
                     /locus_tag="MOX77_002875"
     CDS             complement(11049..11279)
                     /locus_tag="MOX77_002875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000423444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358348.1"
                     /translation="MELRWCTALLVSDPLHMLRLKTIAQDNGIDSRSSPTRATRYKSW
                     WAQTRFLLRETFYYSGYRLLRYMPVQNNSITP"
     gene            complement(11345..11785)
                     /gene="tnpA"
                     /locus_tag="MOX77_002876"
     CDS             complement(11345..11785)
                     /gene="tnpA"
                     /locus_tag="MOX77_002876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000458342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605-like element ISSen6 family
                     transposase"
                     /protein_id="HCA3358349.1"
                     /translation="MFATLLFLRSTSIQKHKINRSRHAAFLLHVHLVFITKYRRKILG
                     ESHYAAFHQYAAEVCRDFGGELKESNGDVDHVHMLIEYPPTVQLSVLVNSLKAVTSRR
                     LRNEFIDLRGAYGKAVLWSRSYFAGSCGGAPLEVVKQYIQHQRG"
     gene            11808..13013
                     /locus_tag="MOX77_002877"
     CDS             11808..13013
                     /locus_tag="MOX77_002877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001669153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HCA3358350.1"
                     /translation="MLILKAYKFRLEPTPEQSQRLRQLCGCARFVWNLGLAETKRILG
                     SGEKLPSAFELNRMLTVWKKMPGHIFLQDAYTDNLQQKLKDLHTAWKRCFDKKLAAKA
                     PVWKRKNEGRDSIRFVNFEKYCRLENRRVKLPSGLGWVKFRQSQRVNGKIKNATISQL
                     AGQWYISFQVEVETAEPNHTSTTIVGLDAGVTKLATLSDGTVYQPVNSFKASQRKLAT
                     LQRQLSRKVRFSSNWQKQKRKVQHLHSHIANIRRDYLHKVTSEISKNHAMIVIEDLKV
                     SNMSKSAKGTAEQHGRNVKAKSGLNRSILDQGWYEMRRQLEYKQLWRGGQVLAVPPAY
                     TSQRCACCGHTAKENRLSQSKFVCQACGYTANADVNGARNILAAGHAVLACGGMVQSG
                     RPSETGTRR"
     gene            complement(13089..13487)
                     /locus_tag="MOX77_002878"
                     /pseudo
     CDS             complement(13089..13487)
                     /locus_tag="MOX77_002878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459103.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
     gene            13581..13790
                     /locus_tag="MOX77_002879"
                     /pseudo
     CDS             13581..13790
                     /locus_tag="MOX77_002879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_446563.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            14005..14424
                     /locus_tag="MOX77_002880"
     CDS             14005..14424
                     /locus_tag="MOX77_002880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4751 family protein"
                     /protein_id="HCA3358351.1"
                     /translation="MNVSMQARLVGSDRYLFVNTQRANPSIKTVSRFFEYKTWTEQIW
                     RTEIIENGNAFFHWQGHDRKDGHRDTIINYLLNGQRWQSTIEDYIFFHALEGKAWQGH
                     YDNIIEYVSSDHYVYQSAFAEYITDQIHQRAPHGTRF"
     gene            complement(14430..15125)
                     /gene="araD"
                     /locus_tag="MOX77_002881"
     CDS             complement(14430..15125)
                     /gene="araD"
                     /locus_tag="MOX77_002881"
                     /EC_number="5.1.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 4-epimerase"
                     /protein_id="HCA3358352.1"
                     /translation="MLEDLKHQVLEANLALPKHNLVTLTWGNVSAVDRERGVLVIKPS
                     GVDYSVMTADDMVVVSLETGEVVEGHKKPSSDTPTHRLLYQAFPTIGSIVHTHSRHAT
                     IWAQAGQPIPATGTTHADYFYGTIPCTRKMTEAEINGEYEWETGNVIVEAFEKQGINA
                     AQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEVAYMGIFCRQLAPQLPDMQQSLLDKH
                     YLRKHGAKAYYGQ"
     gene            complement(15266..>15442)
                     /locus_tag="MOX77_002882"
     CDS             complement(15266..>15442)
                     /locus_tag="MOX77_002882"
                     /EC_number="5.3.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459107.1"
                     /note="catalyzes the formation of L-ribulose from
                     L-arabinose in L-arabinose catabolism; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-arabinose isomerase"
                     /protein_id="HCA3358353.1"
                     /translation="ILAGGAHHTVFSHALDLNDMRQFAEIHDIEIAVIDNDTRLPAFK
                     DALRWNEVYYGLKR"
BASE COUNT         3514 a         3998 c         4184 g         3746 t
ORIGIN      
        1 cccggcgggt tcgccgggag tgataacaac gcgttgcgca ctgctcatta gttactcaaa
       61 atcttaacgt aagcgctggc gcgctgttct tgcatccagg tcgccgcttc ttctgagaat
      121 ttacggttca tcagcatacg ataagcgcga tctttctgcg ccgcatcggt tttgtctacc
      181 ttacgcgtat ccagcaattc gatcagatgc cagccgaaag aggagtgtac cggcgcgctt
      241 atttggcctt tatgcagctt cgttagcgcg tcgcggaacg ccggatcgaa aatatctggc
      301 gtagcccaac ccaaatcacc gccttggtta gcggagcccg ggtcctgaga gtactctttc
      361 gccgctgcgg caaatgtggt tttaccactc ttaatgtcag ccgcgatttc ttccagcttc
      421 aggcgcgcct gctgatcgtt catgatcggc gacggcttaa gcagaatgtg acgagcgtga
      481 acttcggtca cggagatact ctggctctga ccgcgcaggt cgtttacttt cagaatgtgg
      541 aagccgacgc cggagcgaat cgggccgaca atgtcgcctt tcttcgcggt gctcagcgcc
      601 tgggcgaaaa tccccggcag ctcctgaata cggccccagc ccatctgacc accttttaac
      661 gcctgctggt cggcagagta ggtaatcgcc agtttgccga aatctgcgcc gttacgcgct
      721 tcttcaacaa tgctttccgc ctggcgctgc gcgtcgttaa cctgctcgga ggttgggttt
      781 tccggcagag caatcaggat atggctcagg ttcagctcgg tgctggcgtc gttttgggtg
      841 ccaatctgtt ttgccagcgc gtcaacttct tgcggcaaaa cggtgatacg gcgacgaact
      901 tcgttgttgc gcacttcaga gataatcatc tctttacgaa tctggttacg gtaggttgaa
      961 tagttcagcc catcgtaagc cagacggctg cgcatctgat ccatcgtcat attgttttgt
     1021 ttggcgatgt tggcgatggc ctgatccaac tgctcatccg tgatcttcac ccccatcttc
     1081 tgacccatct gcaggataat ttgatccata atcaaacgtt ccaggatctg gtggcgcagc
     1141 gtggcgtcgt ccggaagctg ctgacctgcc tgacccgcgt tgagtttgac tgattgcatt
     1201 aagccatcaa cgtcgctttc cagcacgacg ccattattga cgacggctgc gactttatcg
     1261 actacctggg gggcagcgaa actggtattc gcgatcatgg cgataccgag aagcagcgtt
     1321 ttccagttct tcatactttt tccatttcaa ttaaccgcaa tgcggattac gttgtaaatc
     1381 aatcagatta catagagctt tggtacggca gaatgttcga acgcaacatt tcttgcgtgc
     1441 cgaggccgta gttagagctc aaaccgcgca gctcaatgtt gaagccaatc gcgttatcat
     1501 aaatcgcgtg ttgtttatcg ttatcccaac cgttcagctt acgttcgtat ccgacgcgga
     1561 tcgcatagca gcaagagttg tactgcaagc cgagcatctg gtctgcaggt ttgctcgaat
     1621 tggtatcgaa gtagtacgcg ccgacaatcg accagcgatc ggcaatcggc caacttgcca
     1681 ccgcgcccac ctggttgatg ccgtttttat actgctctgc cgtggaataa tacgaaggca
     1741 acgtagcctg aatatattcc gggctggcat agcggtagtt caactgtacc agacgatcct
     1801 gatcccgacg gtattcgagg ctgctgctgc tggtagcgac gctatccaga cgggtatcgt
     1861 actgcactcc gctacgcagc ccccagcgtt ctgaaatacg ccagtaagtg tcacctgccc
     1921 aaaccagcga accggttttg tcgtcattct cccatttaat gttgtcatcg ccggtgcgag
     1981 actccgtgaa atagtagatt tgaccaacag aaacgttaaa acgttcaacg gcggcatcat
     2041 cataaatgcg tgttgtgacg ccggtcgtga cctggttggc ggaagcaata cggtcgagac
     2101 cgccataagt gcggtcgcgg aacaggccgt tatagtcgga ttgcagcaaa gaagaatcgt
     2161 agttatagat gccgctctgg tcgcggtacg gcacatacag gtactgcacg cgtggttcca
     2221 gcgtttgggt ataccccggc gccagcatcg ccatatcgcg ttcgaagacg agcttaccgt
     2281 cgactttaaa ctgcggcatg acgcggttaa ccgaatcttc cagttttttg ctgttattgg
     2341 cgttgtacca gtccagattc gtctgctgat agtgcgtcgc catcagcttc gcttcggtgt
     2401 tcagactgcc ccagcggttg gagagcggca gactaatggt cggctccagg tggacgcggg
     2461 tcgcttccgg catattgtct ttggtgttga caaagtgcac cgcctgaccg taaatccggg
     2521 tatcaaacgg gccgagatcg ttatggtagt agttaacgtc taactgcggc tccgctgaat
     2581 agctgctggt gttctgatcg ttaaagacct ggaattgttt ggtcgacacc gtagcgtcaa
     2641 agttttgtac ggcgtagccg acgctgaatt tctgcgttgc gtagccgtcg gtactggaac
     2701 cgtacttact gtcgaaatca ttaaagtagc tggagtcgct gactttggtg taatcgacgt
     2761 taaaacgcca cacctgatcc atcacgcctg agtgctgcca gtagaataac cagcggtgct
     2821 tatcgccctc tttgggatgt tcgtcctcgt agactttatc agaaggcaga taatctaatt
     2881 ccatcaaccc ggcgccggcc tgcgtgagat aacggaattc gttctcccac ataatattgc
     2941 cgcggcggtg catatagtgc ggggtgatgg tggcgtccat attgggcgcg atgttccagt
     3001 aatacggtaa gtagaactcg aaatagttct tggtcgtgta tttcgcgttc gggatcagga
     3061 aacctgagcg acgtttgtca ccgacgggta gctgtaaata ggggctataa aagatcggaa
     3121 ccggacctac tttaaaccgg gcgttccaga tctccgcaac ctgttcttca cggtcatgga
     3181 tgacttcact ccccaccacg ctccaggtat cggagccagg cagacaggag gtaaagctgc
     3241 cgttttccag aatggtatag cggttttcgc cacgctgctt catgagatcg gctttaccgc
     3301 gcccctgacg gcccaccatt tggtaatcgc cttcccagac gttcgtgtct ttggtgttca
     3361 ggttcgccca gcccttcggc cctttaagga tgacctgatt gtcatcataa tgcacattac
     3421 ccagcgcatc gacggtgcgt acaggttccg gctgaccttc cgcctgcttc tgatgaagct
     3481 gcacttcatc cgcttgcagg cggctattcc cctgcataat gtccacgttg ccggtaaaaa
     3541 cggcatcgtc cgggtagtta cctttagcgt tatcggcatt gatagtaacc ggcagatcgt
     3601 tggtatcgcc ttttaccaga ggacgatcgt agctcggcac gcccaacata cactgtgagg
     3661 cgagatcggc tgccagcccc tgatgactat aaagggcgct ggcgatcatg gtggccagaa
     3721 gagtgggaat acgttttttc atacgttgta tttattgttc catcatcggt agcgttgcgc
     3781 gtgacaaacg gtcacagcct aacttactca tcttcgctgc gccagtgtta atcctgccgt
     3841 ttagcgtctg tggtgttagg cacggcattg aatgacaggt atgataatgc aaattatagg
     3901 cgatgtccca caaatgaccg tagccttcat tcgcggaaaa gcaccttatt ttgtgggaga
     3961 tagcctcacc gatagcgtaa cgttttgggg agtctatgca gtactgggga aagataattg
     4021 gcgtcgccgt agccctgatg atgggcggcg gcttttgggg cgtggtcctg ggtctgctgg
     4081 tgggccatat gttcgacaaa gcccgcagcc gaaaaatggc gtggtttgcc aaccagcggg
     4141 aacggcaggc gctgtttttt gccaccacct ttgaggtgat gggccactta accaaatcaa
     4201 aaggacgggt gacggaagcg gatattcata tcgccagtca gttgatggat cgtatgaatt
     4261 tacacggcga ttcacgtact gccgcgcaga acgcctttcg ggtcggaaaa gcggataatt
     4321 acccattacg tgaaaagatg cggcagtttc gtagcgtctg cttcgggcgt tttgatctga
     4381 tccggatgtt tctggaaatt cagatccagg cggcgtttgc cgatggttca ctgcacccta
     4441 atgagcggga agtgctgtat gtgattgcgg aagagttagg tatttcccgc gtacagttcg
     4501 atcagtttct gcgcatgatg cagggcggcg cgcagtttgg cggcggttat catcaacagt
     4561 ccggcggcgg ctggcagcag gcgcagcgcg gcccgacgct ggaagatgcc tgtaatgtgc
     4621 tgggggttaa aaccaccgat gatgcaacca ccattaaacg cgcttatcgc aaactgatga
     4681 gcgagcatca tcccgataag ctggtggcca aagggttgcc gccggaaatg atggagatgg
     4741 cgaagcaaaa agcgcaggaa attcagaaag cgtatgagct aatcaaagaa cagaaaggct
     4801 tcaagtgatt gaattgccgg atgcggctag cgccttatcc ggcctacgtt aatgaatgta
     4861 ggccgggcaa gcgaagcgct ccggcataaa ttggctcaga atttaaaaat ctgccgggac
     4921 tttaaacgtc atgctgttac cgtaagcggg atgggtaatg gtcagcattt cggcgtgtaa
     4981 ctgcaaacgc ggcgccagcg acaacgcttc cggcgaggcg taaaactgat cgcctaagat
     5041 cgggtggcct aacgccagca tatgcacacg cagctgatgc gaacgcccgg tgatcggttt
     5101 gagcaccacg cgggcggtat tatccgccgc aaattccacc acgttatatt ccgtttgcgc
     5161 cggtttgccg gtttcataac acactttctg ctttggccgg ttcggccagt cgcagatgag
     5221 cggtaagtcg accagtcctt ccgccgggga gggatgcccc catacgcgcg ccacatactg
     5281 ctttttcggc tcacgttcgc ggaactggcg ttttagctcc cgctccgcgg ctttggtcag
     5341 cgccactaca atcacgccgc tggtggccat atccagacga tgcaccgact ctgcctgcgg
     5401 gtagtcgcgc tggatacgcg tcataatgct gtctttgtgc gcttccagac gccccggcac
     5461 ggacaacagg ccgctgggct tattgaccac cataatgtgc tcatcctgat acaggataac
     5521 cagccagggt tcctgcggcg gattgtagtt ttccatcccc atgtacggct ccgttattgg
     5581 tgcgtgacga cgataagacg cagcgcgtcc agacgccagc ctgcctgatt caggctttcc
     5641 agcacctgct gacggttgct gtcgatagcg gcaagttcgt cgtcgcggat gttcgggttg
     5701 acggcgcgca gcgcttccag acgcgacagt tccccggaca gtttttcatc tgcctcgcgg
     5761 cgcgcgttat caatcagcgc tctggcggac tgttcaatct gcgtctcgcc cagttgcaaa
     5821 atggcgtgga cgtcctgttg aacggcgttc accagtttgc taccggtgtg gcgattcacg
     5881 gcgctgagct ggcggttgaa ggtttcaaac tcgacctggg cggccagatt gttgccgttt
     5941 ttatctaaca gcatacgtac cggcgtcggc ggcaggaagc ggttcagttg tagctgtttc
     6001 ggcgcctgcg cttccacgac gtaaaccagt tcgaccagca gcgtgccgac gggcagcgct
     6061 ttatttttca acagcgaaat ggtgctgctg ccggtatcgc cggagaggat cagatccagt
     6121 ccgttacgga tgagcggatg ttcccaggta ataaactgcg catcttcgcg agacagggct
     6181 acgtcacgtt caaacgtgat agtacaaccg tcttccggca ggccggggaa atccggcacc
     6241 aacatgtggt cggacggcgt cagcacgatc aggttgtcgc cgcgatcatc ctggttaatg
     6301 ccgacgatat cgaacaggtt catggcgaac gcgatcaggt tggtgtcgtc gtcctgttct
     6361 tcaatgcttt gtgcaagctg ttgggctttt tcaccaccgt tggagttgat ctccagcagg
     6421 cggtcgcggc cctgttctaa ctgggctttt agcgcttcat gttgttcgcg gcaggatttg
     6481 atcagatcgt caaacccgtc ggtttcttca ggcgcggcca gatagttaat cagactggcg
     6541 taggctgaat cataaatcgc gcgaccggtc gggcaagtgt gctcaaaggc gtccagccct
     6601 tcgtgatacc agcgaaccag caccgactgg gcggtttttt ccaggtacgg gacgtggatc
     6661 tggatatcat gcgcctggcc gatacgatcc agacgaccaa tacgctgttc cagcagatcc
     6721 gggttaaacg gcaagtcgaa catcaccaga ttgctggcaa actggaagtt acgtccttcg
     6781 gagccgattt cggaacataa cagcacctgc gcgccggtat cttcttcggc gaaccaggcg
     6841 gcggcgcggt cgcgttcgat aatcgacatg ccctcatgga acacggcggc gcggatgcct
     6901 tcgcgttcgc gcagcacctg ctccagctgt aacgcggtgg tcgccttggc gcagatcacc
     6961 agcacttttt gcgaacgatg gctggtcaga tagcccatca gccactcaac gcgtgggtcg
     7021 aagttccacc aggtgccggt atcgccttcg aactcctgat aaatttgttc cggatagagc
     7081 atatcgcggg cgcgatcttc cgcgctttta cgcgcgccca taatgccgga gaccttaatg
     7141 gcggtctgat actgggtcgg cagcggcagt tttaccgtat gcagttcacg tttcgggaac
     7201 cccttgacgc cgttacgggt gttgcggaac agaacgcggc tggtaccgtg gcgatccatc
     7261 agcatcgaca ccagctcatc acgggcggcc tgcgcgtcgt cgcgatcgct attagcggcc
     7321 tgtaacagcg gttcaatatc ctgttcgccg atcagatcgc ccagtctgtt cagttcgtcg
     7381 ttgctgagtt tattgcccgc cagcagcatg gccaccgcat cggcgacagg gcggtagttt
     7441 ttctgttctt cgacaaactg ttcgaaatcg tggaaacggt tcggatcgag caggcgcaga
     7501 cgggcgaaat ggctttccat ccccagctgt tctggcgtgg cggtcagcag cagcacgccc
     7561 ggcacgcgtt cagctaactg ttcgatggcc atatattcac ggctcggcgc atcggtgctc
     7621 cacaccagat gatgcgcttc gtcgaccacc agcaaatccc actcggcgtc gcacaaatgt
     7681 tccagacgct gcttattgcg gcgggcgaaa tccagcgagc agatcaccag ttgttcggtt
     7741 tcaaacgggt tatacgcgtc gtgctgcgct tcggtatagc gttcgtcatc gaacagcgcg
     7801 aagcgcaggt tgaaacggcg cagcatttct accagccact ggtgttgcag ggtttccgga
     7861 acgatgatca atacgcgttc cgccgcgccg gataataact gttgatgcag aatcatcccg
     7921 gcttcaatgg ttttacctaa gcccacttca tccgccagca gtacgcgcgg cgcgtggcga
     7981 cgacccacat catgagcgat attaagctga tgcgggatca ggttggtccg ctgaccgcgc
     8041 aggccgctgt atggcatccg gtactgctcg ctctgaaatt tacgggcgcg atagcgcagc
     8101 gcgaaccgat ccattcgatc gatttgaccg gcgaacagac gatcctgggg cttactgaaa
     8161 accaacttgc tgtcgagcag aacttcgcgc aacgtcacat tggtttcttc ggtatccagg
     8221 cgggtgccga cataaacaag caggccattt tcttctttta cttcatcgat atgtagctgc
     8281 cagccttcat ggcttgtaat cgtatcgcca gggttgaaca tgacgcgggt cacgggagaa
     8341 tcactgcgcg catacaggcg gttttccccc gtggacggga aaagtaaggt gacggttcgc
     8401 gcatccatcg caacaacggt tccaagtccc agctcgcttt ctgtatcgct gatccagcgt
     8461 tgaccaagtg taaaaggcat atgtgttcgg ctctatatct ttaattgcag gcattactcg
     8521 ccattcccag gcgacagcac tggataattg cgagtatacg accccgctac caggctaatg
     8581 tggtagtggc gttaattagg tccaggaatg gaaagggcgc tatggtactg gaaggcggcg
     8641 ctttcgtcac gcgtcaaaat aaccccagtt gcccggtcag tagtgtagca aaattatctt
     8701 caacgaaggg aagaattcct tccgccacgg gttgtagctg gcgggtaaga tagtgttcgt
     8761 aatccagcgg cgactgctgg taatccacgg gctcggggcc gttaacagtc cagacatatt
     8821 ttatggcgcc gcgattctga tactgcgccg gacgaccctg cttcaggttt tgttcatccg
     8881 ccagccgggc ggcgcgaacg tgcgacggaa cgttacgctg gtactcatgt aaagggcgac
     8941 gcagacgctt acgataaacc agctgcgcgt ccagttcgcc cgccatcagt ttatcgatag
     9001 tctcgcgcac atagtcttga taaggttcat tgcgaaaaac gcgcagatac agctcctgtt
     9061 gaaagcgctg cgccagcggc gtccagtcgg tccgcaccgt ttccagacct ttaaatacca
     9121 tgcgctggct gtcgccttcc tgaatcaggc ccgcgtagcg ttttttactg ccagtatccg
     9181 cgccgcggat ggtcggcatc agaaaacggc aaaagtgagt ttcaaactcc agttccagcg
     9241 cgctggtcaa attttgctgt tgtaacgtct gcgcccacca ttcgttcacg tgacgcacca
     9301 gcctgtgccc gatttccgcc gcatcggctt ctgaatgcgc gcgccggagc cagacgaaag
     9361 tggaatcggt atcgccataa atcacgtcat aaccctgcgc ctcaatcagc gctttggtct
     9421 ggcgcataat cgcatgaccg cgcatggtga ttgacgacgc cagacgggga tcgaaaaagc
     9481 gacaggccgt ggtgccgagt acgccataaa aggcgttcat aatgatttta agcgcctgcg
     9541 agagcggttt attgccctga cgtttggctt catcgcgccc gtgccagatt tggctaacaa
     9601 tttccggcag gcagtgcttt tctcgtgaaa accaggcgtc aaggaaacct tcggtactgt
     9661 gttccgggtc cggctgcgcc atgccttcga ccagcccgac gggatcaatc aaaaacgtgc
     9721 ggataattga cgggtacagg cttttataat ccagcaccag tactgaatcg tataatccgg
     9781 gttgtgaatc cattacgtag ccgccgggac ttgccagcgg cggcacttcg ccgagattgg
     9841 gcgcgatata gccggcgcgg tgcattcgcg gaaagtaaag atgcccgaat gcggcgaccg
     9901 aaccgccgtg gcgatcgacc ggcaggccgt tgatcgtcgc gcgttccaac aaaaacggca
     9961 tgatttcggt tttatggaaa atgcgcgtga ccagctcgca gtctttcagg ttgtaggtgg
    10021 cgagggcggg tttatcctgg gcaaagcggc gatcgatctc atccatacga tcccaggggt
    10081 tatcaatgga ttttccttcg ccgagcagtt cctgcgagac ggcttccagc gaaaaagacg
    10141 aaaaattcca gaacgcggat ttaagcgcgt cgataccatc gataatgact cgccctctgg
    10201 cctgggcgaa aaaaacgccg tttttgaagc catgttcgcg ccactccagt tcgctattgt
    10261 ctcgccccag ccgtaaaggg atacggtagc gttcggcata tttttgcagc atacgcaggt
    10321 cgaactgcac cacgttccag ccgatgatga cgtcaggatc atgttcggca aaccaggcgt
    10381 tgagtttttc cagcaactgc gggcggctgg cgacatacac aagctcgaag tccagttggc
    10441 gctcatcgcc gttcgccggg cccagcatat aaacggtacg ctggccgcag ccttccagac
    10501 caatgcaata cagctcgccg tgtcgcgtgg tttcgatatc cagcgagacc cattttagcg
    10561 gcggtcgata gtcggggtgg ggtttaagac gcgcattgcg gataacgccg ttgcgcatct
    10621 cgccatctac ccaaacaggc gaagtgataa aacgttccat caggtaacgc tccggcgggc
    10681 ggacatccgc ttcataaacg gtgacgccgt tttcgcgcag cagtttctcc atccgcataa
    10741 gctggcggtg agtgcggcaa tacagaccgg ataccggctg acggtgaaag tctcgcagct
    10801 ggagcggcgt caggcgatag tctttttccg cctgtagcag cgaggcggcg cgggaggtct
    10861 ggctggtcgg aataaacgcc acggactctt gcggcgccag cgtcgcctgc aaagggccgt
    10921 tgtctgtcgc cagccagaaa gagacctccg tcccttgcgg cgtatcccgc cagtgccggg
    10981 ttaaaatgaa acctgcctgc gccacgatga ttacctgtct aaaaaattca cgctaattat
    11041 aacctgtttt agggggtaat actgttattt tgtacaggca tataacgtaa aagccgatat
    11101 ccgctgtaat aaaaagtttc tcgcagtaag aagcgggttt gcgcccacca ggatttatag
    11161 cgggtggctc gcgtgggtga tgagcggcta tcgataccat tatcctgagc gatagttttc
    11221 agacgcagca tatgcagcgg atcgctgacc agtaacgctg tgcaccatct taactccaaa
    11281 gggtactccc gccgacataa ggcgggaggg gaatttggac gggcttgaaa agcccgaagg
    11341 atcatcagcc acgctgatgt tgaatgtatt gcttcacaac ttccagcggc gcacctccgc
    11401 acgagccagc aaagtatgac ctcgaccaga gcacggcttt tccgtatgct ccccgcaaat
    11461 caataaattc gtttcgcaga cggcgggatg tcacagcttt cagtgagtta accagtaccg
    11521 aaagctgcac tgttggtggg tattcgatca gcatgtggac atgatcgacg tctccgttac
    11581 tttctttaag ttctccgcca aaatcacggc agacttctgc tgcatactga tggaatgcag
    11641 catagtgtga ctcacccagt atctttcgac ggtattttgt tataaagaca agatgaacat
    11701 gcaaaaggaa ggcggcatgt cttgaacgat taattttatg tttttgtatt gaagttgacc
    11761 gtaaaaacag taacgtagca aacaaatctc ctacacactg agtgatgatg ctaatcctga
    11821 aagcctacaa attcagactg gaaccaacgc ctgaacagtc gcagcgtttg cggcagttat
    11881 gtggttgcgc ccgttttgtc tggaatttag gtcttgcgga gacaaagcgc atccttggtt
    11941 caggcgaaaa gttaccttcg gctttcgagt tgaacaggat gcttacagtg tggaaaaaaa
    12001 tgccgggaca catcttttta caggatgctt ataccgacaa tctgcaacaa aagttgaaag
    12061 acctgcatac tgcatggaaa cgttgctttg ataaaaagct cgcagctaag gccccggtat
    12121 ggaaacgaaa aaatgagggc agagactcaa tccgttttgt gaactttgag aaatattgcc
    12181 gccttgaaaa tcgcagagtg aagctaccgt caggtcttgg gtgggtaaaa ttccggcaat
    12241 ctcaacgtgt gaacggtaaa atcaaaaatg cgacaatcag tcagttagcg ggacagtggt
    12301 atatctcgtt tcaggttgaa gttgaaacgg cagaacccaa tcacacaagc acaacgatag
    12361 tcggtctgga cgcaggagta acaaaactcg ccacgctttc agacggtacg gtataccaac
    12421 cagtcaacag ttttaaagca agtcagcgca agctggcaac actccagcgg cagttaagcc
    12481 gtaaagtcag attcagcagt aactggcaga aacaaaagcg aaaagtccag catctgcact
    12541 cgcacatagc caatatccgg cgcgactacc ttcataaagt taccagtgaa atcagcaaaa
    12601 accacgcgat gatagtcatt gaggatttga aggttagtaa catgtcgaaa tcggcaaaag
    12661 gtacagcaga acagcacgga cgaaacgtca aggccaaatc aggtctgaac cgttcgatac
    12721 tggatcaggg ctggtatgaa atgcgccgcc agcttgagta caaacagctc tggcgtggcg
    12781 gtcaggtgct tgcggttccg ccagcataca caagccagcg ttgcgcgtgc tgtggtcata
    12841 ccgcgaaaga aaatcgcctg tcacaaagta aatttgtgtg tcaggcatgc ggatatacag
    12901 cgaacgctga tgtaaacggc gctcgtaaca ttttagcggc ggggcacgcc gttcttgcct
    12961 gtggagggat ggtgcagtca ggccgcccgt ctgaaacagg aaccagacgc tgagcaatca
    13021 gtcgtcaccc actaatggga attccccacc tgagtcacga agtgcgaagg tgggggagga
    13081 tgtcaatgtt gttgtcgcag tatctgtttt gcgtaacgaa tattttcgcg cgtcacggta
    13141 gagcgctctt caataaaaat cgccttagcc ggaatgcctt tttccagaac gtattgacgg
    13201 gctatcgccg cgtcggaaac cgttgcgcca gcgccgtagc cgccggttaa taccaacgcg
    13261 cggacaatgt gttgttggta aagccagatg gcatgatcca gtctggcctg aaaaacggga
    13321 gaaggcgttt ttccgctaac gcctgctcct gcgacaatcg cgcagtcagc tacgcgcgtc
    13381 tggttttgct gactgaactg ataaatagcg atagcgttat ggataaacac catggccata
    13441 atgagaatga tgcctgccgc gattctgagg atgtagcgat atttcatgaa tgagttcgtt
    13501 ccccgtgacg ggtgtaatga atattttaac gataaaatgg cttttagcgt cagatatttt
    13561 tgctgacgta tatttatcaa tataatgatg ccggtatata cagcagatat aattatccta
    13621 taactgctaa ttttgaatca tgtttattta cagtttttac ccatgtatta gccgttttgt
    13681 gtcaagtctg ttttcataca ttaagtattt ttcagaaagg cgcttgttcg aatctgttac
    13741 ttatttctcg gattaacaaa aaagcgatat tttttgtttg ttttaattaa tgaaaagtgt
    13801 aacaatttca tttggaacat ccgcaccgtc aggtagaaat ataatattcc aattggccgc
    13861 tatggttaaa taaaaatgga ttacagtgcg aattcgtcgg gaactctctg cataatttaa
    13921 tttttatttt agaatataat tttattttga ctttcgggtg cgggtgtttt tatcaaaatt
    13981 tgtggtattc aggaatgatc ttttatgaat gtgagtatgc aggcgcgtct ggtagggagc
    14041 gaccgttatc ttttcgtcaa tactcaacgc gctaaccctt ccataaaaac cgtgagtcga
    14101 ttttttgagt ataaaacatg gacagaacag atttggcgta ccgagattat tgaaaacggc
    14161 aatgcttttt ttcactggca aggacacgac agaaaagacg gacatcggga taccattatt
    14221 aattatctgt taaatgggca acgctggcag tcaacaatcg aagattatat tttcttccat
    14281 gcgctggaag gaaaagcgtg gcagggacat tatgataata ttattgaata tgtgagttct
    14341 gatcattacg tctatcaaag cgcatttgct gaatatatca ccgaccagat tcatcaacgc
    14401 gccccccatg ggacgcgttt ttagaggcat tactgcccgt aataggcttt tgcgccgtgt
    14461 ttgcgtaaat agtgtttatc cagcagggat tgctgcatgt cgggcaactg cggcgcaagc
    14521 tggcggcaga agatccccat ataggccact tcttccagca cgatggcgtt atgcacggca
    14581 tcctcggcat ttttacccca ggcaaacggg ccgtgcgaat ggacaagcac gccgggcatt
    14641 tgagcggcgt taatgccttg tttttcaaag gcttcaacaa tgacattgcc cgtttcccat
    14701 tcatactcgc cattaatttc cgcctcggtc attttgcgag tgcagggaat cgtaccgtag
    14761 aaatagtcgg cgtgggtggt gcccgtcgcc ggaatcggct gacccgcctg cgcccagata
    14821 gtcgcgtggc gcgaatgggt gtgtacgatg ctgccgatag tcggaaatgc ctgatataac
    14881 agacggtggg ttggcgtatc ggacgacggt ttcttatgac cttcaacgac ttcaccggtc
    14941 tccaggctga ccaccaccat atcgtcagcg gtcatgacgc tataatcgac gccggacggc
    15001 ttaatcacca gtacgccgcg ttcgcgatcg acggcgctaa cgttacccca ggtgagggtg
    15061 accaggttgt gttttggcag cgccagattg gcttccagta cctggtgttt gagatcttct
    15121 aacattgttt tctccctgcc ggatggcgct tcgcttatcc ggcctacgag cgacggtgtg
    15181 ccggatggcg acataaatgc cttattcggc ctacaggacc gtaggcccgg taaacgcagt
    15241 gccaccgggc attcagacac cacttttagc gttttaaacc gtaatacacc tcgttccagc
    15301 gcagcgcgtc cttaaaggct ggcagacggg tatcgttatc aatcaccgcg atttcgatat
    15361 cgtgtatttc tgcgaactgg cgcatatcgt tcagatccag cgcgtggctg aagacggtat
    15421 ggtgcgcgcc gccagccaga at
//
LOCUS       DAGWFR010000092        15126 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.094, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000092 DAGWFR010000000
VERSION     DAGWFR010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 15126)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15126)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15126
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.094"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..2479)
                     /gene="putA"
                     /locus_tag="MOX77_002883"
     CDS             complement(<1..2479)
                     /gene="putA"
                     /locus_tag="MOX77_002883"
                     /EC_number="1.2.1.88"
                     /EC_number="1.5.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_447555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional proline dehydrogenase/L-glutamate
                     gamma-semialdehyde dehydrogenase PutA"
                     /protein_id="HCA3358354.1"
                     /translation="MGTTTMGVKLDDATRERIKMAASRIDRTPHWLIKQAIFSYLDKL
                     ENSDTLPELPALFAGAANESEEPVAPQDEPHQPFLEFAEQILPQSVSRAAITAAWRRP
                     ETDAVSMLMEQARLSPPVAEQAHKLAYQLAEKLRNQKSASGRAGMVQGLLQEFSLSSQ
                     EGVALMCLAEALLRIPDKATRDALIRDKISNGNWQSHIGRSPSLFVNAATWGLLFTGR
                     LVSTHNEANLSRSLNRIIGKSGEPLIRKGVDMAMRLMGEQFVTGETIAQALANARKLE
                     EKGFRYSYDMLGEAALTAADAQAYMVSYQQAIHAIGKASNGRGIYEGPGISIKLSALH
                     PRYSRAQYDRVMEELYPRLKSLTLLARQYDIGLNIDAEEADRLEISLDLLEKLCFEPE
                     LAGWNGIGFVIQAYQKRCPLVIDYLVDLASRSRRRLMIRLVKGAYWDSEIKRAQMEGL
                     EGYPVYTRKVYTDVSYLACAKKLLAVPNLIYPQFATHNAHTLAAIYHLAGQNYYPGQY
                     EFQCLHGMGEPLYEQVTGKVGDGKLNRPCRIYAPVGTHETLLAYLVRRLLENGANTSF
                     VNRIADATLPLDELVADPVEAVEKLAQQEGQAGIPHPKIPLPRDLYGEGRINSAGLDL
                     ANEHRLASLSSALLSNAMQKWQAKPVLEQPVADGEMTPVINPAEPKDIVGWGREATES
                     EVEQALQNAVNQAPVWFATPPQERAAILQRAAVLMEDQMQQLIGLLVREAGKTFSNAI
                     AEVREAVDFLHYYAGQVRDDFDNETHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNS
                     VLAKPAEQTSLIAAQGIAILLEAGVPPG"
     gene            2901..4409
                     /gene="putP"
                     /locus_tag="MOX77_002884"
     CDS             2901..4409
                     /gene="putP"
                     /locus_tag="MOX77_002884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proline symporter PutP"
                     /protein_id="HCA3358355.1"
                     /translation="MAISTPMLVTFCVYIFGMILIGFIAWRSTKNFDDYILGGRSLGP
                     FVTALSAGASDMSGWLLMGLPGAIFLSGISESWIAIGLTLGAWINWKLVAGRLRVHTE
                     FNNNALTLPDYFTGRFEDKSRVLRIISALVILLFFTIYCASGIVAGARLFESTFGMSY
                     ETALWAGAAATIIYTFIGGFLAVSWTDTVQASLMIFALILTPVMVIVGVGGFSESLEV
                     IKQKSIENVDMLKGLNFVAIISLMGWGLGYFGQPHILARFMAADSHHSIVHARRISMT
                     WMILCLAGAVAVGFFGIAYFNNNPALAGAVNQNSERVFIELAQILFNPWIAGVLLSAI
                     LAAVMSTLSCQLLVCSSAITEDLYKAFLRKSASQQELVWVGRVMVLVVALIAIALAAN
                     PDNRVLGLVSYAWAGFGAAFGPVVLFSVMWSRMTRNGALAGMIIGAVTVIVWKQYGWL
                     DLYEIIPGFIFGSLGIVIFSLLGKAPTATMQERFAKADAHYHSAPPSKLQAE"
     gene            5302..6090
                     /gene="phoH"
                     /locus_tag="MOX77_002885"
     CDS             5302..6090
                     /gene="phoH"
                     /locus_tag="MOX77_002885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001741490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate starvation-inducible protein PhoH"
                     /protein_id="HCA3358356.1"
                     /translation="MGRQKAVIKARREAKRVLRRDSRSHKQREEESVTSLVQMGGVEA
                     IGMARDSRDTSPVKARNEAQAHYLNAIDSKQLIFATGEAGCGKTWISAAKAAEALIHK
                     DVERIIVTRPVLQADEDLGFLPGDIAEKFAPYFRPVYDVLLKRLGASFMQYCLRPEIG
                     KVEIAPFAYMRGRTFENAVVILDEAQNVTAAQMKMFLTRLGENVTVIVNGDITQCDLP
                     RGVRSGLSDALERFEEDEMVGIVHFNKDDCVRSALCQRTLHAYS"
     gene            complement(6196..7077)
                     /locus_tag="MOX77_002886"
     CDS             complement(6196..7077)
                     /locus_tag="MOX77_002886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HCA3358357.1"
                     /translation="MEPQPPRLKPGKILDTLGAMQKSLTRASQRIAQYILAFPRQVTQ
                     SSIADLSRDTQAGEATVIRFCRTLGYKGFQDFKMDLAIELATTESDDSSPLLDAEVSE
                     SDDAHAIGLKLQNTISNVLSETLNLLDMQQVLGVVDALRHCHSVYIFGVGSSGITALD
                     MKHKLMRIGLRGDAVSNNHFMYMQATLLKAGDVAMGVSHSGTSPETVHSLRLARQAGA
                     TTVAITHNLGSPLCEEADFCLINGNRQGMLQGDSIGTKAAQLFVFDLLYTLLVQSSPE
                     QARESKLRTMNALDMTK"
     gene            complement(7363..8860)
                     /locus_tag="MOX77_002887"
                     /pseudo
     CDS             complement(7363..8860)
                     /locus_tag="MOX77_002887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460100.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:solute symporter"
     gene            complement(9197..9877)
                     /locus_tag="MOX77_002888"
     CDS             complement(9197..9877)
                     /locus_tag="MOX77_002888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmannosamine-6-phosphate 2-epimerase"
                     /protein_id="HCA3358358.1"
                     /translation="MSLLARLEQSVHENGGLIVSCQPVPGSPMDKPEIVAAMAQAAAS
                     AGAVAVRIEGIENLRTVRPHLSVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADII
                     AFDASFRSRPVDIDSLLTRIRLHGLLAMADCSTVNEGISCHQKGIEFIGTTLSGYTGP
                     ITPVEPDLAMVTQLSHAGCRVIAEGRYNTPALAANAIEHGAWAVTVGSAITRIEHICQ
                     WFSHAVKR"
     gene            10384..11538
                     /locus_tag="MOX77_002889"
     CDS             10384..11538
                     /locus_tag="MOX77_002889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylneuraminate epimerase"
                     /protein_id="HCA3358359.1"
                     /translation="MGMQMKNFKKMMTLMALCLSVAITTSGYATTLPDIPEPLKNGTG
                     AIDNNGVIYVGLGTAGTSWYKIDLKKQHKDWERIKSFPGGAREQSVSVFLNDKLYVFG
                     GVGKKNSESPLQVYSDVYKYSPVKNTWQKVDTISPVGLTGHTGVKLNETMVLITGGVN
                     EHIFDKYFIDIAAADESEKNKVIYNYFNKPAKDYFFNKIVFIYNAKENTWKNAGELPG
                     AGTAGSSSVMENNFLMLINGELKPGLRTDVIYRAMWDNDKLTWLKNSQLPPSPGEQQQ
                     EGLAGAFSGYSHGVLLVGGGANFPGAKQNYTNGKFYSHEGINKKWRDEVYGLINGHWQ
                     YMGKMKQPLGYGVSVSYGDEVFLIGGENAKGKPVSSVTSFTMRDGNLLIK"
     gene            11584..12276
                     /locus_tag="MOX77_002890"
     CDS             11584..12276
                     /locus_tag="MOX77_002890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligogalacturonate-specific porin KdgM family
                     protein"
                     /protein_id="HCA3358360.1"
                     /translation="MKINRYLLGMVSFIAFSSYLQAATLDYRHEYADRTRINKDRIAI
                     IEKLPNGIGFYVDASVKSGGVDGEQDKHLSDLVANAIELGVSYNYKVTDHFVLQPGFI
                     FESGPDTSIYKPYLRAQYNFDSGVYMAGRYRYDYARKTANYNDDEKTNRFDTYIGYVF
                     DELKLEYKFTWMDSDQIKFDNKKTNYEHNVALAWKLNKSFTPYVEVGNVAVRNNTDER
                     QTRYRVGLQYHF"
     gene            12559..13839
                     /locus_tag="MOX77_002891"
     CDS             12559..13839
                     /locus_tag="MOX77_002891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3358361.1"
                     /translation="MIAKFFPWYSEITRPQKNALFSAWLGYVFDGFDFMLIFYIMYLI
                     KADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGL
                     ASGVIMLTLSRFIVGMGMAGKYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAY
                     FMPSFAEAYGWRAAFFVGLLPVLLVIYIRARAPESKEWEEAKLSGLGKHSQSAWSVFS
                     LSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAA
                     FGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMAT
                     NVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTF
                     IVAFWTATILLIIGLSIPDRLKARRERFQSTKEF"
     gene            13850..14956
                     /locus_tag="MOX77_002892"
     CDS             13850..14956
                     /locus_tag="MOX77_002892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HCA3358362.1"
                     /translation="MMTKYGVIGTGYFGAELARFMSKVEGAKITAIYDPVNAAPIAKE
                     LNCVATSTMEALCTHPDVDCVIIASPNYLHKAPVIAAAKAGKHVFCEKPIALNYQDCK
                     DMVDACKEAGVTFMAGHVMNFFHGVRHAKALIKAGEIGEVTQVHTKRNGFEDVQDEIS
                     WKKIRAKSGGHLYHHIHELDCTLFIMDETPSLVSMAAGNVAHKGEKFGDEDDVVLITL
                     EFESGRFATLQWGSSFHYPEHYVLIEGTTGAILIDMQNTAGYLIKAGKKTHFLVHESQ
                     AEDDDRRNGNISSEMDGAIAYGKPGKRTPMWLSSIMKLEMQYLHDVINGLEPGEEFAK
                     LLTGEAATNAIATADAATLSSNEGRKVKLTEILG"
BASE COUNT         3900 a         3369 c         3831 g         4026 t
ORIGIN      
        1 cgcccggcgg tacgcccgct tccagcaaaa tggcaatgcc ctgggcggca atcagcgatg
       61 tctgctctgc cggtttcgcc agaacgctgt tacctgccgc cagcgcggcg gcgatttggc
      121 cagtgaaaat ggccagcgga aagttccacg gactgataca gaccaccggc cctaacgggc
      181 gatgcgtttc gttatcgaaa tcgtcacgca cttgaccggc ataataatgg aggaagtcta
      241 ccgcttcgcg cacttcggca atggcgttgc tgaacgtttt ccccgcttca cgcaccaaca
      301 ggccaatcaa ctgctgcatt tggtcttcca tcaataccgc cgcccgctgc aaaatagcgg
      361 cgcgttcttg cggcggcgtc gcaaaccaaa ccggcgcctg attgaccgcg ttttgcaacg
      421 cctgttcaac ctcgctttct gtcgcttcgc gtccccagcc aacaatatct ttcggttccg
      481 ccgggttgat aaccggcgtc atctcaccgt cggccaccgg ttgttccagc acaggtttgg
      541 cctgccattt ctgcatggcg ttgcttaaca gggcagaaga aagcgaggcg aggcgatgtt
      601 cattcgctaa atcaagtccg gcggagttta tccgaccttc gccgtacaga tcgcgcggca
      661 gcggaatttt tggatgcggt atgccagcct gaccttcctg ctgcgccagt ttttccacgg
      721 cctcgaccgg gtcggccacc agttcatcga gcggtagggt ggcatcggcg atgcggttga
      781 caaaagaggt gttggcgccg ttttccagca ggcgtcgtac cagataggcc agcagggttt
      841 cgtgtgttcc caccggcgcg taaatacggc agggacggtt aagttttccg tcccccactt
      901 taccggtgac ctgttcatac agcggttctc ccatgccgtg caggcactgg aattcgtact
      961 gacccggata gtaattttgc ccggccagat gataaatcgc cgccagtgtg tgagcgttat
     1021 gggtcgcgaa ctgcgggtag atcagattag ggacggcgag cagttttttc gcgcaggcca
     1081 gataagagac atcggtatac actttgcggg tataaactgg atagccctcc agcccttcca
     1141 tttgcgcgcg tttgatctcg ctatcccagt aggcgccttt caccagacga atcatcagcc
     1201 gacggcggct acgggaggcc agatcgacta aataatcaat gaccagcggg cagcgtttct
     1261 ggtaagcctg aatcacaaag ccaatgccgt tccagcccgc cagttcgggt tcgaagcaga
     1321 gtttttccag cagatcaagc gagatctcca gacgatccgc ctcttcggcg tcgatattga
     1381 gaccgatatc atactggcgc gccagcagcg tcagggattt caggcgcgga taaagctcct
     1441 ccattacccg atcgtattgc gcgcgactat agcgtggatg cagggcggac agcttaatcg
     1501 agatgcctgg cccttcgtaa ataccgcgac cgttagacgc tttgccgatg gcatgaatcg
     1561 cttgctggta agagaccata taggcctgcg catcggcggc ggttaacgcg gcttcgccca
     1621 gcatatcgta agaatagcgg aaccctttct cttccagttt tcgggcattc gccagcgcct
     1681 gagcaatggt ttcgccagtc acgaactgct cgcccattaa acgcatcgcc atgtcgacgc
     1741 ctttgcggat taacggttcg ccgctcttgc cgataatgcg gttcagcgag cgcgaaagat
     1801 tggcttcgtt atgcgttgag accagtcggc cggtaaagag cagcccccag gtggcggcgt
     1861 ttacaaacag cgacgggcta cggccaatat gcgactgcca gttgccatta ctgattttgt
     1921 cgcgaattaa cgcatcgcgc gtagctttgt cgggaatacg cagcagcgct tccgccagac
     1981 acatcagcgc tacgccttct tgcgaagaga gggaaaactc ctgcaacagg ccttgcacca
     2041 tacccgcgcg accgctggcg gatttttgat tgcgcaattt ctccgccagt tgatacgcca
     2101 gtttatgcgc ctgctcagcg acaggcggcg acaggcgcgc ctgttccatt agcattgaca
     2161 ccgcatcggt ttccgggcgg cgccaggcgg cggtgatggc ggcgcgagag acggattggg
     2221 gaagaatctg ttcggcaaac tccagaaagg gctgatgcgg ctcatcctgc ggcgcgaccg
     2281 gctcctcgct ttcatttgcc gcgccggcaa acagcgcagg tagctccggt agcgtatcgc
     2341 tattttccag cttgtccaga tagctaaaga ttgcctgttt tattaaccag tgcggcgtgc
     2401 gatcgatacg cgacgcggcc attttgatcc gttcgcgcgt ggcgtcgtcc agcttaaccc
     2461 ccatcgtggt ggttcccata ccctctactc ctgttattcg ctctatctgc taaccaatag
     2521 ttagcggaaa atatccacta tattgcaact ttgtgcaacc gcgttaaatg tgacctgcgt
     2581 tgcaagctta aaaatgaata aattgttaaa aaaagaaagt gggagtctga cggggaaaac
     2641 catctggatt tattttctct gcggtagtta acacttttaa aaggtgcaac cgcaaaaaat
     2701 gtgagagagt gcaacctgga gaaaaatagt atccctctgc aatcaaattt gatgtaaatg
     2761 gtgtgttaaa tcgattgtga ataaccaccg attccggcag gatacggtcg ccctggtaaa
     2821 cataacaccc ttgccacgtt ccggcagggt acaaaacggc acgctacggt agtgccaata
     2881 aataaatttg gagaaccttg atggctatta gcacaccgat gttggtgaca ttctgtgtct
     2941 atatttttgg catgatattg attgggttta tcgcctggcg ctcaaccaaa aactttgatg
     3001 actatattct tggcggtcgc agcctggggc cgtttgttac ggctttatca gccggcgcgt
     3061 cggatatgag cggctggctg ttaatggggc tgcctggcgc tatctttctg tcggggatct
     3121 ctgaaagctg gatcgccatt ggcctgacgt taggcgcatg gattaactgg aagctggtgg
     3181 ccgggcgcct gcgcgtgcat accgaattta acaataacgc gctcacgctg ccggactatt
     3241 ttaccggtcg gtttgaggat aagagccgag tcctgcgtat tatttccgcg ctggtcattc
     3301 tgctgttttt cactatctat tgcgcatcag gtattgtcgc tggggcacga ctgttcgaaa
     3361 gcaccttcgg tatgagctat gaaaccgcac tgtgggcggg ggccgcggca accattattt
     3421 atacctttat cggcgggttt cttgccgtta gctggacgga taccgttcag gccagcctga
     3481 tgatttttgc gttaatcctg acgccggtga tggttattgt cggcgtaggc ggttttagcg
     3541 agtcgctgga agtgatcaag caaaagagca tcgagaatgt cgacatgctc aaggggctga
     3601 attttgtcgc tattatttct ctgatgggct gggggctggg ttacttcggt cagccgcata
     3661 tcctggcgcg ctttatggcg gcggattccc atcacagtat tgttcatgcg cgtcgtatca
     3721 gtatgacctg gatgattctg tgtctggcgg gcgcggtggc ggtgggcttc tttggcattg
     3781 cgtactttaa caataacccc gcgctggccg gggcggtgaa ccaaaactca gaacgcgtat
     3841 ttattgaact ggcgcagatc ctgtttaacc cgtggattgc cggtgttctg ctgtctgcta
     3901 tcctggcggc ggtgatgtcg acgttgagct gtcagttgct ggtatgctcc agcgcgatta
     3961 cggaagattt atataaggct tttctgcgta aaagcgccag ccagcaagag ctggtatggg
     4021 tagggcgagt gatggtgctg gtggtagcgc tgatcgccat tgcgctggcg gcgaatcctg
     4081 ataaccgtgt gctggggctg gtgagctacg cctgggctgg attcggcgcg gcatttggac
     4141 ctgttgtcct gttttctgtg atgtggtcgc gtatgacacg taacggcgcg ctggcgggaa
     4201 tgattattgg cgcggtgacg gttatcgtct ggaaacaata tggctggctg gatctgtatg
     4261 agattatccc tggcttcatt ttcggcagcc tggggatcgt aatctttagc ctgcttggca
     4321 aagcgccgac agcaacgatg caggaacgct ttgcaaaagc ggacgcgcat tatcattccg
     4381 cgccgccgtc gaagctacag gcggaataac cgacatgtcc gatagcatta ttgccatcgg
     4441 atatatttta ccaggcggcg ttatacgcct gcctggtcct ctgataagtc ccggaccgat
     4501 tgactgaagg tgttcaggta aatgaggacg ctctctcaaa ctatttttag cccttgagcg
     4561 ccgttaacgc ggccgtaata cgtctcgagt aatcactaac tgaccatata tgaaatcgcc
     4621 tgttaatggt accaatagcc ttgacgcaat agagtaatga caaaaattaa aacgagtcag
     4681 cgttactggc gtaagtatgc cgcacaaaat tttgcataaa taatgccgtt ttagcgatgg
     4741 gagagaggac acgttaatta ctccgtttta atcttttata tgttgaatat tcaatgggtt
     4801 atgggtgttt tcaccattaa tacccatagt agctaatgat tatctttttt agtctcctgc
     4861 caatgaaata attgtgtaat ctttctgtaa gagactgaca atgacgcaat aatgtttggt
     4921 taatgtttgg tgaatatatt gttgcattat tgatgttttg tgttgtactt agtagtaata
     4981 gcggtagttc cccggcagtg atggtcactc actatggaga tcgcgaatgg taatgtccgc
     5041 accaggacac attgtttaca gtagttacaa caccctgtac ggacattctc tctccggtgg
     5101 tggtcttgtc atcttaaaag ctctcatcat ttcccttact gtccataccc atgacgccat
     5161 atgtggtgcg cgtagccgtg tgtggcgtcg tttcaaaaag caagctaagg cttacaagga
     5221 agccaaccct cagatgtgtg tgcgcataat cgcgttcaag agaacgcggg tgatgtatac
     5281 ctacaactca aggtgctatc catgggaaga caaaaagcag tgatcaaagc tcgtcgtgaa
     5341 gcaaagcgtg tgttgagacg agattcgcgt agtcataagc aacgtgaaga agaatcggtc
     5401 acgtcactgg tacagatggg cggagtagaa gccattggca tggcgcgcga tagtcgcgat
     5461 acctctcctg ttaaggcgcg aaatgaagca caggcgcatt atctgaacgc tatcgacagt
     5521 aaacagctta tttttgcgac cggcgaagcc ggctgcggaa aaacatggat cagtgcggca
     5581 aaggcggcag aagcattgat tcataaggac gtcgagagga tcattgtgac gcgtccggta
     5641 ttgcaggctg atgaagatct tggttttttg cccggtgata tcgctgaaaa attcgcgcct
     5701 tattttcgtc ccgtctacga tgtcctgctt aaacggttgg gcgcgtcctt tatgcaatat
     5761 tgtttgcgcc cggaaatcgg taaggtagaa attgccccgt tcgcctatat gcgtgggcgt
     5821 acttttgaaa atgcggtcgt gatcctcgac gaggcgcaaa atgtgactgc ggcgcaaatg
     5881 aaaatgtttt tgacgcgatt aggcgaaaat gtcacggtca ttgtcaatgg cgatattacg
     5941 caatgcgacc tgccgcgcgg tgtgcgttcc gggttgagtg atgcgttgga acgctttgaa
     6001 gaagatgaaa tggtggggat tgtgcatttc aacaaagacg actgcgtgcg ctcggcgctt
     6061 tgtcagcgaa cgctccacgc atacagctaa tatagcattg actttcagag cccgggagac
     6121 cgggctttgt tgtctataaa gcgtccagca gactcatgga caaaaaagga aaatgacgcc
     6181 tgtacgtgaa gggaattatt ttgtcatgtc cagggcattc attgtccgta atttgctttc
     6241 tcgggcctgt tccggcgagg actgtacaag aagggtatag agcaggtcaa agacgaaaag
     6301 ctgcgcggct ttcgtaccga tcgagtcacc ctgcaacatt ccttgccgat taccattgat
     6361 caggcaaaaa tcggcctctt cacataatgg agaacccaga ttatgggtaa tggcgactgt
     6421 ggtggcgcca gcctgtcggg ccaatcggag tgaatgcact gtttctggcg atgtgcccga
     6481 gtgactgaca cccatcgcga catcgcctgc ttttaatagc gtagcctgca tgtacataaa
     6541 atggttattg cttaccgcat cgccccgtaa accaatacgc attagcttgt gtttcatatc
     6601 cagcgccgtg atccccgatg agcccacacc aaagatataa actgagtgac agtgacgtag
     6661 ggcgtccacg acaccgagaa cctgttgcat atcaagcaga tttagcgttt cagataatac
     6721 attactaatg gtgttctgca attttaaacc aatggcgtgg gcatcgtcgg attcgctaac
     6781 ttcggcatcc agtagaggac tactgtcatc agactcggta gtggcaagtt caatggccag
     6841 gtccatttta aaatcctgaa aacctttata gcccagggtg cgacaaaagc gaataaccgt
     6901 ggcttctccg gcctgtgtgt cgcgcgacaa atcggcaata gatgactgtg tcacctgtct
     6961 ggggaaggct aaaatatatt gcgcaatacg ctgggaggca cgtgtcaggc ttttttgcat
     7021 agcacccaga gtgtcaagga tttttccggg tttaagacgt gggggttgag gctccatata
     7081 gttcctgctc ttgagggctg attgcggcac aaagcctgca atatcgaaca gagcagagcc
     7141 tatcaagtct gcggcatgaa aaaaagcgcg atgtaagtaa aggaggggga atatttacat
     7201 cgcgttgcca acttatgaca gaacatcact ggagagtaat ctgtttgctc ttacggtgtt
     7261 tatagcgcgc catctgtcgg atggtttata tctggcccgg tattgtcgcc ccgcgcgttg
     7321 gcgtcaccgt gtgctgtgtc ggtatagcgt ggtatcatga aatcataatg tcacctttgg
     7381 ttcaggtttt tcatccagcg tcaatggcgg tgccggggca aataacgggg cgaaaataac
     7441 gccgctgatc accacgctta gcgagccaat gaccccataa aagaagaagt taaggtcagt
     7501 ggcatagcgt gtgcccagca cggtaatgac gctgataata attcctaaaa ccgcactccc
     7561 ggcatttgct cgtttaaaga aaatgcccag catgaacaga ccggtcattg gccctcccat
     7621 cagacctatc agactattaa atgcatccca gatttctgat tcatcggcca tgaccagcca
     7681 taccgaggcc gcgctactta tcaggcccgc gaccagaata actaacttag ctattttcat
     7741 acggttttct ggcgttcctt ttttatgact caaacgctga tagatatcgg aattaaaaca
     7801 actggaaatg ctgtttaagc tgctggagat gctggactgc gcggcagcga aaatagcgga
     7861 gattatcaac cctgcaatgc cgactggcat ttcggtgacc acgaataagg gcaaaatgcc
     7921 gccagtgttg aatcccgccg gtaataattg tggatgttgc tgatagtaga caaataatgc
     7981 cgagccgata gcaaaaaaga aaacagggat cacagcaacc agtttggcat ttgtaagtaa
     8041 tgttttcttc gtttcctcta tggagtcagt cacgatatag cgttggacca catcctgact
     8101 ggcagtaaat tgctgaatat tggcaaacag aaaaccaatc atcaatacag gtactgtgct
     8161 ttccgtccag ctccagtgga actgcgtagc cggaaagaat ttatccgcct gctgcgtcac
     8221 cgtaaaaatt tcaccaatgc cgccctggac tttgagacat atcactataa aaatcagtat
     8281 cgcgctgcca gaaagtaaga gaccttgaat aacatcagtc catattactc cttcaattcc
     8341 cccccatcca ggtataaatg atacacatca cactaatcaa cagtaccaaa atcaccgggt
     8401 ctatagcgat gaaggggcgc aaggccagca cggtgaggaa agtgataatg gcgatacgtc
     8461 caatatgaaa caacataaat gacatgctgg cgaacagacg gcagcgcaca tcgaaccgtg
     8521 cttcgagata ttcataggct gatgtgactt tcaatttccg aaaaaacgga atatagaaat
     8581 aaaaaaccag cggtaaaatt gcgatagcca gatactgacc aatgataaac gtccagtcgg
     8641 aagtaaacgc tttggcagga attgacataa atgtaattga gcttaacgta gtagcaaata
     8701 cactgacccc agccgcccaa ccaggaaccc ggccaccacc gcgaaaataa tcgtctgctg
     8761 ttttttgccg tctggaaaaa tagacaccga ctaacatcat ggccaggagg tagccaaata
     8821 atacaaaata attaacgatg ccgaaagaat gtgtaatcat agttctttcc tgcttatggt
     8881 tttgagtagc gttgcggtca tcgtctgtgt atttttatct tcccatcatt cagacgatac
     8941 gatattcaga tcaagcaata gtttttgtta atctcaatga cgctaatcat gagatgtaaa
     9001 aggcagagca tttatgctcc accaatggtg atgcccagac gtatgtcctg ccggatacct
     9061 gaaatagcag ctatccgata ttgcgttcaa acaggcttca ggcctgggta tcgtatttgc
     9121 cgatagcatt cttaacgtcg gattattctc tgagacataa atatcaatag taagcgtgtt
     9181 cattttcttt tcctgttcag cgttttactg cgtgactgaa ccactgacag atatgctcga
     9241 tacgggtgat agcggaacca acggtaactg cccaggcacc atgctcaata gcattggccg
     9301 ccagtgcagg cgtgttatag cgcccctcgg caataacacg acaacctgca tgactcagtt
     9361 gtgtcaccat tgccaaatct ggctcaaccg gcgtgatggg accggtatag ccagacagtg
     9421 ttgtaccaat gaattcgatt cctttctgat ggcaacttat gccttcattc acggttgaac
     9481 agtctgccat cgccagtaat ccatgcaggc gaatacgtgt cagtaaacta tcaatatcaa
     9541 ccgggcgaga gcggaatgag gcatcaaaag cgataatatc ggcacctgcc tgcgccaggg
     9601 cgtcaacatc ctgtaaatat ggagtgatac ggactggcga ccctgtaagg tcacgtttaa
     9661 ttatcccaat aataggaaca gaaagatggg gacgaacagt ccgcagattc tcaatgcctt
     9721 caatgcgcac agcgaccgca cccgccgaag ccgctgcctg tgccattgca gccacaattt
     9781 caggtttatc catagggctg cctggtaccg gttggcatga gacaatcagc ccaccgtttt
     9841 cgtgtacact ttgttccagc ctggctaata gtgacatcca gttccgcctt atatattttg
     9901 aagttttact ccgttttata ttatgttgtg gagtgttgct gcatcaagca aaaagataga
     9961 aaaatgtgaa cacagtcata aggtatgttt gtcattcaat tactgcgcca gcggatttga
    10021 ggctataacc tgaagctaca agacaaatac aattcattct gacggcagca tgctgtattt
    10081 tattaactgc ttccggcata aagataaaat gctcagaagg agcttatacg ccacgggata
    10141 gccagtatga aatgcatcac ataattcttg ttgtatttat tcagaatgca atcactaatg
    10201 agtttgccca taacaggtca cccataatca cttctaacat caccatagtg tgcttttacc
    10261 tcgcacatgg taaccccatg taattatttt tagcgcttgg tcacattttg tcattttcat
    10321 tgttgaaatt atgcaccata agatcactaa tgatgaagct ttactccagt tgtatttctt
    10381 cgcatgggga tgcagatgaa aaattttaag aaaatgatga cgctaatggc gctatgttta
    10441 tcagttgcta tcaccacatc aggatatgca accacgcttc ctgatatacc agaaccactg
    10501 aaaaatggta ctggcgctat tgataataat ggcgtgattt atgtcggctt aggtaccgca
    10561 gggacatcct ggtataaaat tgatcttaaa aagcaacata aagactggga gcgtataaag
    10621 tcgtttcctg gtggagctcg tgagcaatcc gtgtcggtat ttttaaatga taagctgtat
    10681 gtttttggtg gcgtagggaa aaaaaacagt gaatcaccgt tgcaggttta tagcgatgtg
    10741 tacaaatact caccggtgaa aaatacatgg caaaaagttg atactatatc tccagttgga
    10801 ttaacagggc atacgggagt aaaattaaac gaaacgatgg tacttattac cggaggggtt
    10861 aatgagcata tctttgataa gtattttatt gatatagcgg ctgcggatga aagtgaaaaa
    10921 aataaagtca tctataatta ttttaataaa cctgccaaag attatttttt taataaaatc
    10981 gtatttatct acaatgctaa agagaacaca tggaagaatg ccggtgagct gccaggcgcg
    11041 gggacggcag gatcgtcatc ggtaatggaa aataatttct tgatgctgat taatggtgag
    11101 ctcaaaccgg gtttacgtac cgatgtgatt taccgcgcca tgtgggataa cgataagcta
    11161 acatggttga agaacagcca gttaccgcca tcgcctggag aacaacagca ggaagggttg
    11221 gccggagcat tttcgggcta tagccacggt gtcctgcttg tcggtggtgg cgcgaatttt
    11281 ccgggagcaa aacaaaatta tactaatgga aagttttatt cccacgaagg gataaataaa
    11341 aaatggcgag atgaagtcta tggtttgatt aatggccatt ggcaatatat gggtaaaatg
    11401 aaacaacctc tcggctatgg tgtatcagta agttatggtg atgaagtttt ccttattggt
    11461 ggtgaaaatg ctaaagggaa acctgtttcg tctgtaacct cctttaccat gcgtgatggt
    11521 aatttattaa taaaataatt ttttaaatac aaaaataaag ttaattgata agcggagtat
    11581 tttatgaaaa tcaacagata tcttctgggt atggtttcgt ttatagcatt ttcatcatat
    11641 ctacaagcgg caacccttga ttatcggcat gaatatgctg atagaaccag aattaataaa
    11701 gaccgtattg ctataattga aaagcttcct aacggcattg gtttttatgt cgatgccagc
    11761 gttaaatcgg gaggagtaga tggtgagcag gataagcatt taagcgatct cgtcgcaaac
    11821 gctatagaac tgggcgtaag ttataattat aaagttacgg accattttgt tttgcagcct
    11881 ggatttatat ttgaaagcgg tccagacact tcaatttata agccttattt aagggcgcaa
    11941 tataattttg attctggtgt ttatatggct ggtcgttacc gttatgacta tgcaaggaag
    12001 acagctaact ataatgatga tgagaaaacg aatagatttg atacttatat aggttatgtt
    12061 tttgatgagt tgaaattgga atataaattt acctggatgg atagcgatca aattaaattt
    12121 gataacaaaa aaacaaacta tgaacataat gtggctttag cctggaaact gaataagtca
    12181 tttacaccat acgttgaggt cggaaatgta gcggtgagaa ataataccga tgagagacag
    12241 acccgttatc gcgttggatt acaataccac ttttgagaaa ggttaaagag ttactgtact
    12301 aatctttgct tagtattcat atcgataatc ttatagcccg tagctacgtt acagaacgtt
    12361 agactttgtc ttgagtattc acgtccttaa cgtagctacg aacaaggatg ataaacaatg
    12421 aatatacgcc ttacatagct acgatctcag gcggttgtcg gaaagtgccg gttgatagtg
    12481 tcttattcgg caattgatat gacttaaaaa ttaattccgt aagcatttca gacggtaaca
    12541 gcaaataagg gttttattgt gatagcaaaa ttcttcccgt ggtatagcga gataacacgt
    12601 ccacaaaaaa atgctttatt ttcagcatgg ctgggttacg tttttgatgg cttcgacttt
    12661 atgctgattt tctacattat gtatctgatc aaggctgact taggattgac agatatggag
    12721 ggcgcattcc ttgccacagc ggcctttatt gggcgaccat ttggcggggc gctatttggt
    12781 ctgctggcag acaaatttgg ccgtaagccg ttaatgatgt ggtcgatagt tgcctattct
    12841 gtaggtacag ggttaagtgg cctggcttcc ggtgtaatta tgctgacgct tagtcgtttt
    12901 attgtcggta tggggatggc ggggaagtat gcttgcgctt ctacttatgc cgtggaaagt
    12961 tggccaaagc atttaaaatc taaagcgagc gcatttctgg tttcaggttt cggtattggt
    13021 aacatcatag cagcctattt tatgccgtca tttgccgaag cgtatggttg gcgtgctgct
    13081 ttttttgtcg gtttgctacc cgttctttta gtaatctaca tccgggccag ggctcctgaa
    13141 tctaaagagt gggaagaagc caaactcagt ggtctcggaa agcattcaca aagtgcctgg
    13201 tcagttttct ctttgtcaat gaaagggcta tttaatcgag ctcaatttcc actgacatta
    13261 tgtgtattta ttgttctgtt ctctattttc ggcgcaaact ggccgatctt tggtctactg
    13321 cctacatatt tggcgggaga gggctttgat acgggcgtgg tctctaattt aatgacggcg
    13381 gcggcattcg gcactgtatt gggaaatatc gtttggggtc tgtgcgcaga tagaattggt
    13441 ttgaagaaaa cgttcagcat tggtcttctc atgtcctttt tattcatttt cccgttattc
    13501 agaattccgc aagataatta tttactgctg ggcgcatgtt tattcggttt aatggcgact
    13561 aacgtaggtg ttggcgggct ggttcccaaa tttctctacg actactttcc tcttgaggtt
    13621 cgtggtttgg gtaccgggct tatttataat cttgctgcga catcaggcac attcaattca
    13681 atggcggcga cctggcttgg aataacaatg gggctaggcg ctgcgctaac gttcattgtt
    13741 gctttctgga ccgcaacaat tctactcatt attggcctat ccattccgga tagactaaaa
    13801 gcacgtcgtg aaaggtttca gtcaacaaaa gaattttaat agaggataaa tgatgacgaa
    13861 atacggtgtt ataggtacag gttattttgg cgctgaactg gcgcgattta tgtctaaggt
    13921 tgaaggggcg aaaatcactg cgatttacga tccggtaaat gcggctccga tagcgaaaga
    13981 gctgaactgt gtcgccactt caacgatgga ggcgctttgt acccatcctg atgtggattg
    14041 cgtaattatt gcttcaccaa attacttaca taaagcgccg gtcattgcgg cggctaaagc
    14101 gggtaaacac gtgttttgtg aaaaacctat cgccttaaat taccaggatt gtaaggatat
    14161 ggttgatgcc tgcaaagaag ctggtgttac ctttatggcg ggtcacgtta tgaacttttt
    14221 tcacggggtt cgccacgcta aagcgctcat caaagccggt gaaatcggtg aagttacaca
    14281 agttcacact aaacgtaatg gttttgaaga cgtgcaggat gagatctcat ggaagaagat
    14341 tcgcgcaaag tcaggtgggc atctgtacca tcacattcac gagctagatt gtacactgtt
    14401 catcatggat gaaaccccat ccctggtttc aatggcggcg gggaatgttg cgcacaaagg
    14461 tgaaaaattt ggtgatgaag atgatgttgt cctaatcacc cttgagtttg aaagcggtcg
    14521 tttcgcgaca cttcagtggg gatcatcgtt ccactaccct gagcactatg tattaattga
    14581 gggcacgaca ggtgcaattc tcattgatat gcaaaacacg gctggttatc taataaaagc
    14641 gggcaaaaaa acacactttc ttgtgcatga aagccaggcg gaggatgatg atcgtcgcaa
    14701 cggtaacata tccagcgaga tggatggcgc aatcgcttat ggtaaacccg gtaaacgtac
    14761 gccgatgtgg ctctcatcaa ttatgaaact ggagatgcag tacttgcatg atgtgataaa
    14821 cggtctggag ccaggcgagg agtttgctaa attgctaacg ggagaagcgg cgacaaatgc
    14881 cattgctacc gctgatgctg cgacgctttc ttcaaacgag gggcgcaaag ttaaactcac
    14941 tgaaattctt ggctaaaatt taaagccgga tggtggtgtt attggccggt ggcgctgcgc
    15001 ttatgtagac tggataaggc gcccgtgaac tgtgccgcca tccggcaatg gacgggggct
    15061 taatgcgaaa aaaagcccgt acattcgtac gagctctttc ttaaatatgg cggtgagggg
    15121 gggatt
//
LOCUS       DAGWFR010000093        14968 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.095, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000093 DAGWFR010000000
VERSION     DAGWFR010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 14968)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14968)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14968
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.095"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..266
                     /locus_tag="MOX77_002893"
     CDS             <1..266
                     /locus_tag="MOX77_002893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="isoaspartyl peptidase/L-asparaginase"
                     /protein_id="HCA3358363.1"
                     /translation="VSCTGTGEVFIRTLAAYDIAALMEYGGLSLADACERVVMEKLPA
                     LGGSGGLIAVDHEGNVALPFNSEGMYRAWGYAGDTPTTGIYRE"
     gene            277..2148
                     /gene="gsiA"
                     /locus_tag="MOX77_002894"
     CDS             277..2148
                     /gene="gsiA"
                     /locus_tag="MOX77_002894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione ABC transporter ATP-binding protein
                     GsiA"
                     /protein_id="HCA3358364.1"
                     /translation="MPHSDELDSRDVLSVSGLNIAFHHEGQQVDAVRNVSLRLKRGET
                     LTIVGESGSGKSVTALALMRLIEQSGANVRCGEMLLRRRNRQVIELSEQSDAQMRRVR
                     GADIAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASHEEALAEAKRMLDQVRIPESQA
                     ILSRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQQEM
                     SMGVIFITHDMGVVADIADRVLVMYQGEAVETGSVEQIFHAPTHPYTQTLLAAVPQLG
                     AMRGHSLPRRFPLISADEPALYESQIEQDTVVEGEPILQVRGLVTRFPLRSGLFNRVT
                     REVHAVENISFDLWPGETLSLVGESGSGKSTTGRALLRLVESRQGEIIFNGQRIDTLS
                     AGKLQPLRRDIQCIFQDPYASLDPRQTVGYSIMEPLRIHGLGQGDAAAKRVAWLLERV
                     GLRPEHAWRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSVRGQIINLLLD
                     LQREMGIAYLFISHDMAVVERISHRVAVMYLGQIVEMGPRRAVFENPQHPYTRKLMAA
                     VPVADPSRHRPRRVLLSDDIPSNIHKRGEETPAVSLQLVGPGHYVARPLQDNALSRL"
     gene            2181..3719
                     /gene="gsiB"
                     /locus_tag="MOX77_002895"
     CDS             2181..3719
                     /gene="gsiB"
                     /locus_tag="MOX77_002895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione ABC transporter substrate-binding
                     protein GsiB"
                     /protein_id="HCA3358365.1"
                     /translation="MTQFITHKWLAALGLASSIAAFPALAAKDVVVAVGSNFTTLDPY
                     DANDTLSQAVAKSFYQGLFGLDKDMKVKNVLAEGYTVSDDGLTYTITLRQGVKFQDGA
                     DFNAAAVKANLDRASNPDNHLKRYNLYKNIAKTEVVDPATVKITLKQPFSAFINILAH
                     PATAMISPQALEKYGKDIGFHPVGTGPYQLETWNQTDFVKVKKFAGYWQQGLPKLDSI
                     TWRPVTDNNTRAAMLQTGEAQFAFPIPYEQAALLAKNKNLELVASPSIMQRYISMNVT
                     QKPFDNPKVREALNYAINRQALVKVAFAGYATPATGVVPPSIAYAQSYQPWPYDPAKA
                     RELLKEAGYPDGFSTTLWSSHNHSTAQKVLQFTQQQLAQIGIKARITAMDAGQRAAEV
                     EGKGQKESGVRMFYTGWSASTGEADWALSPLFASQNWPPTQFNTAFYSNKQVDSDLAA
                     ALKTNDPQEKTRLYKEAQDIIWKESPWIPLVVEKLVSAHSKNLTGFWIMPDTGFSFDD
                     ADLK"
     gene            3780..4700
                     /gene="gsiC"
                     /locus_tag="MOX77_002896"
     CDS             3780..4700
                     /gene="gsiC"
                     /locus_tag="MOX77_002896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione ABC transporter permease GsiC"
                     /protein_id="HCA3358366.1"
                     /translation="MLNYVLKRLLGLIPTLLIVAVLVFLFVHLLPGDPARLIAGPEAD
                     AQVIALVRQQLGLDQPLHVQFWHYITHVLQGDFGTSMVSRRPVSEEIASRFLPTLWLT
                     ITSMIWAVLFGMAIGIAAAVWRNRWPDRVGMTLAVTGISFPAFALGMLLMQIFSVDLG
                     WLPTVGADSWQHYILPSLTLGAAVASVMARFTRSSFVDVLSEDYMRTARAKGVSETWV
                     VLKHGLRNAMIPVVTMMGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVDMRDYPVIQA
                     EVLLFSLEFILINLVVDVLYAAINPAIRYK"
     gene            4703..5614
                     /gene="gsiD"
                     /locus_tag="MOX77_002897"
     CDS             4703..5614
                     /gene="gsiD"
                     /locus_tag="MOX77_002897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione ABC transporter permease GsiD"
                     /protein_id="HCA3358367.1"
                     /translation="MRLFNWRRQAILHAMPVVKPDQIRTPWREFWRRFRRQHVALVAG
                     GFVLALILVAIFARWLTPYDAENYFDYDSLNNGPSLQHWFGVDSLGRDIFSRVLVGAQ
                     ISLAAGVFAVFIGAIIGTVLGLLAGYYEGWWDRFIMRICDVLFAFPGILLAIAVVAVL
                     GSGIANVIVAVAIFSIPAFARLVRGNTLVLKQQTFIESARSIGASDTTILFSHILPGT
                     VSSIVVFFTMRIGTSIISAASLSFLGLGAQPPTPEWGAMLNEARADMVIAPHVALFPA
                     VAIFLTVLAFNLLGDGLRDALDPKIKG"
     gene            complement(5705..7030)
                     /gene="rimO"
                     /locus_tag="MOX77_002898"
     CDS             complement(5705..7030)
                     /gene="rimO"
                     /locus_tag="MOX77_002898"
                     /EC_number="2.8.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     RimO"
                     /protein_id="HCA3358368.1"
                     /translation="MSNVTHQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPHYDD
                     ADMVIVNTCGFIDSAVQESLEAIGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITG
                     PHSYEQVLQHVHHYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIP
                     SMRGDLVSRPIGDVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPMKTS
                     MVSLCEQLSKLGVWTRLHYVYPYPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMK
                     RPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCF
                     KYSPVEGAGANELPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIVDEVDE
                     EGAIGRSMADAPEIDGAVYLNGETNVKPGDIVRVKVENADEYDLWGSRV"
     gene            7261..7644
                     /gene="bssR"
                     /locus_tag="MOX77_002899"
     CDS             7261..7644
                     /gene="bssR"
                     /locus_tag="MOX77_002899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm formation regulator BssR"
                     /protein_id="HCA3358369.1"
                     /translation="MVVDRLRTDLLNKLINARIDLAAYLQLRKAKGYMSVSESDTLRD
                     NFFELNRELHDHALRQGLHLDQEEWNALRRAEGALAAAAVCLMSGHHDCPTFIAVNAD
                     KLENCLTTLTLSIQSLKAHSPLTQV"
     gene            7763..8884
                     /locus_tag="MOX77_002900"
     CDS             7763..8884
                     /locus_tag="MOX77_002900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001252732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HCA3358370.1"
                     /translation="MRRILLAIVSFSLFSSWANANLAPVNVEVLQTRLDHPWSLAFLP
                     DNRGMLITLKGGQLRHWQTGRGLSDPLAGVPKVWANGQGGLLDVVLAPDFAQSRRVWL
                     SYAEADREGNAGTAAGFGRLSDDFQRLEHFRTVFRQMPKLSTGNHFGGRMVFDAQGFL
                     FIALGENNQRATAQDLDKLQGKLVRLTGQGEIPPDNPFVHQAGARPEIWSYGIRNPQG
                     LAINPWSGALWLHEHGPRGGDEINIPEKGKNYGWPLATWGVNYSGLKVPEAKGEIVEG
                     TEQPVYYWKDSPAISGMAFYASDVFAPWRHKLFIGALKDKEVIVMRVDGNTVTEEGRI
                     LGDRKQRIRDVRVGPDGYLYVLTDESDGQLLKVSPAATR"
     gene            complement(8881..9507)
                     /locus_tag="MOX77_002901"
     CDS             complement(8881..9507)
                     /locus_tag="MOX77_002901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HCA3358371.1"
                     /translation="MITLWGRNNSTNVKKVLWTLEELELPYDQILAGGKFGVNQDADY
                     LAMNPNGLVPLLKDDETDLLLWESNAIVRYLAAQYGQNRLWVDNPARRAEGEKWMDWA
                     NQTLSPAHRVILMGLVRTPPEKRDQAAIEAGIEKCDSLFALLDDALAHQPWFSGDNFG
                     TGDIAIAPFVYNLLNVGLKWTPRPNLQRWYQQLTERPAFRKVVMIPVT"
     gene            9751..10953
                     /gene="dacC"
                     /locus_tag="MOX77_002902"
     CDS             9751..10953
                     /gene="dacC"
                     /locus_tag="MOX77_002902"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine-type D-Ala-D-Ala carboxypeptidase"
                     /protein_id="HCA3358372.1"
                     /translation="MTQYASSLRSLAAGSVLLFLFASPVKAEEQTIAPPGVDARAWIL
                     MDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQALKAGKIKLTDMVTVGKDAWATGN
                     PALRGSSVMFLKPGDQVSVADLNKGIIIQSGNDACIALADYVAGSQESFIGLMNAYAK
                     RLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIHDVPDEYAIHKEKEFTFNNIRQP
                     NRNRLLWSTNLHVDGMKTGTTAGAGYNLVASATQGDMRLISVVLGAKTDRIRFNESEK
                     LLTWGFRFFETVTPIKPDATFVTQRVWFGDKREVNLGAGDAGSVTIPRGQLKNLKASF
                     TLNEPQLTAPLKKGQVVGTIDFQLNGKSIEQRPLMVMENVEEGGFFSRMWDFVLMKLH
                     QWFGSWFS"
     gene            complement(10999..11757)
                     /gene="deoR"
                     /locus_tag="MOX77_002903"
     CDS             complement(10999..11757)
                     /gene="deoR"
                     /locus_tag="MOX77_002903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional repressor DeoR"
                     /protein_id="HCA3358373.1"
                     /translation="METRRDERIGQLLQALKRSDKLHLKEAATLLGVSEMTIRRDLNH
                     KSAPVVLLGGYIVLEPRSASHYLLSDQKSRLVEEKRRAAQLAAGLVQAHQTVFIDCGT
                     TTPWIIEAIDNDLPFTAVCYSLNTFLALQDKPHCRAILSGGEFHASNAIFKPLDFHET
                     LNNICPDIAFYSAAGVHTSKGATCFNLEELPVKHWAMTMAQSHVLVVDHSKFGKVRPA
                     RMGELSRFDTIISDRRPDEAFVAYAKAQQITLMY"
     gene            complement(11829..12437)
                     /gene="ybjG"
                     /locus_tag="MOX77_002904"
     CDS             complement(11829..12437)
                     /gene="ybjG"
                     /locus_tag="MOX77_002904"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HCA3358374.1"
                     /translation="MLENLNNSLFYFINATPDSAQWIISLAIFIAKDVINIVPLLAVV
                     LWLWGPRDRVCAQRQLIVKIGIALIISLAVSWTMGHLFPHDRPFVDHIGYNFLHHAAD
                     DSFPSDHGTVIFTFALAFLFWHRLWSGIVMMAIAMTIAWSRVYLGVHWPLDMIGALLV
                     AMLGCLSAQLIWQWYGAPLYQALQRCYRFCFALPIRKGWVRD"
     gene            12750..13982
                     /locus_tag="MOX77_002905"
     CDS             12750..13982
                     /locus_tag="MOX77_002905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3358375.1"
                     /translation="MQNRLQSGGRLGRQALLFPLCLVLYEFSTYIGNDMIQPGMLAVV
                     EQYQAGLDWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVVWFIVTCLATLLA
                     KNIEQFTFLRFLQGISLCFIGAVGYAAIQESFEEAVCIKITALMANVALIAPLLGPLV
                     GAAWVHVLPWEGMFILFAALAAIAFFGLQRAMPETATRRGETLSFKALGRDYRLVIKN
                     RRFVAGALALGFVSLPLLAWIAQSPIIIISGEQLSSYEYGLLQVPVFGALIAGNLVLA
                     RLTSRRTVRSLIVMGGWPIVAGLIIAAAATVVSSHAYLWMTAGLSVYAFGIGLANAGL
                     VRLTLFSSDMSKGTVSAAMGMLQMLIFTVGIEVSKHAWLSGGNGLFSLFNLANGILWL
                     LLMLVFLKDKRTGNLQTV"
     gene            complement(14036..14851)
                     /locus_tag="MOX77_002906"
     CDS             complement(14036..14851)
                     /locus_tag="MOX77_002906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HCA3358376.1"
                     /translation="MSIKLIAVDMDGTFLSDQKTYNRDRFMAQYQQMKRQGIRFVVAS
                     GNQYYQLISFFPEIAHEIAFVAENGGWVVSEGEDVFNGELAKADFQAVVEHLLTRADV
                     EIIACGKNSAYTLKRYDDALKAVAAMYYHRLEFVDNFNNISDVFFKFGLNITDERIPE
                     VQAALHDAIGDIMVPVHTGYGSIDLIIPGVHKANGLRLLQQRWGIHDSEVVVFGDGGN
                     DIEMLRQAGFSFAMSHASEAVAAAAKYRAGSNNQEGVLDIIDSVLNNEPPFNV"
BASE COUNT         3281 a         3796 c         4277 g         3614 t
ORIGIN      
        1 ccgtttcctg taccggaacg ggagaggtct ttattcgcac gctcgcggct tacgatatcg
       61 ccgcattgat ggaatatggc ggactcagcc ttgccgacgc ctgtgagcgc gtggtgatgg
      121 aaaaattacc ggcgctgggc ggcagcggtg gattaatcgc cgttgatcac gaaggtaatg
      181 tcgcgttgcc gtttaacagc gaagggatgt atcgcgcctg gggatatgcc ggggatacgc
      241 ctaccacagg aatttaccgg gaataaggag ccgcaggtgc cgcacagcga tgaactggat
      301 agccgcgatg ttctgtccgt cagtggcctg aatatcgcgt ttcaccacga agggcaacag
      361 gtagacgccg tgcgtaatgt gtcattacgc ctgaagcgtg gagagactct gacgattgtc
      421 ggcgagtcgg gctcgggaaa atcggtgacg gcgctggcgt taatgcggct gattgagcag
      481 tcgggcgcga acgtgcgctg cggcgaaatg ctgttgcgtc ggcgtaatcg ccaggtgatt
      541 gagctgtctg agcagagtga cgcgcagatg cggcgtgtgc gcggcgcgga tatcgccatg
      601 attttccagg agccaatgac ctcgctcaac ccggtattta ccgttggcga gcaaattgcc
      661 gaatctattc gtttgcatca gggggccagc cacgaagagg cgctggcgga agcgaaacgt
      721 atgctcgatc aggtacggat cccggagtcg caggcgattt tatcgcgtta tccgcatcag
      781 ctttccggcg ggatgcgcca gcgagtcatg attgcgatgg cgctatcctg ccgtccggcg
      841 gtattgattg ccgatgaacc caccacggcg ctggatgtca ctatccaggc gcaaattctg
      901 caacttatca aagtgttgca gcaagagatg tcgatgggcg tgatttttat cactcacgac
      961 atgggcgtcg tggcggatat tgccgatcgc gtgctggtga tgtatcaggg cgaggccgtg
     1021 gaaaccggca gcgtagagca gattttccat gcgccgacgc atccttatac ccaaacgtta
     1081 ctggccgccg tccctcagct tggcgcgatg cgaggccact cgctgccacg ccgtttcccg
     1141 ttgatttccg ctgacgaacc ggccctttat gaatcgcaga ttgagcaaga cacggtggtg
     1201 gaaggcgaac ctattctcca ggttcggggg ctggtgacgc gattcccgct gcgtagcggt
     1261 ctctttaacc gcgttacgcg tgaagttcat gccgttgaga atatcagttt cgatctctgg
     1321 cccggcgaaa cgctatcgct ggtgggcgag tccggtagcg gaaaatcgac gaccggacgc
     1381 gcgctgctgc ggttggttga atcccggcag ggggagatta tctttaacgg ccagcgcatt
     1441 gacacgctgt ctgcgggtaa actccagccg ttgcgccgcg atattcagtg tattttccag
     1501 gacccttacg cctcgctcga cccgcgccag accgtggggt attccattat ggaaccttta
     1561 cggattcatg gtctggggca gggggacgct gcggcaaagc gcgtggcctg gttgcttgag
     1621 cgtgtcggat tacgtcctga acatgcctgg cgttatccgc acgagttttc cggcggtcaa
     1681 cgtcagcgca tctgcattgc tcgcgcgctg gcattgaatc ctaaagtgat tattgctgat
     1741 gaggcggtct ccgcgctgga tgtttccgtt cgcggacaga tcattaattt actgctcgat
     1801 ttacaacggg aaatggggat cgcctacctg tttatttcgc atgatatggc ggtcgtggag
     1861 cgaattagcc atcgcgtggc ggtgatgtat cttggtcaaa ttgttgagat ggggccgcgg
     1921 cgcgccgttt ttgaaaatcc gcagcatcct tatacgcgta aattgatggc ggcggtgccg
     1981 gttgccgatc cctccagaca ccggccgcgg cgcgttctgc tatcagatga tatacccagc
     2041 aatattcata aacgtggcga agagacgccc gccgtttcat tacagttggt cgggccggga
     2101 cattatgttg cgcggccgct gcaggataat gcgctctcgc gcttataaca ttcagacagg
     2161 cagggtttca ggagaacaac atgacgcaat ttattacgca taaatggctg gcggcgctgg
     2221 gactggcctc atccattgcg gcttttccgg ccctggcggc caaagatgtg gtggtggcgg
     2281 tagggtctaa tttcaccacg ctcgatccgt atgacgccaa cgatacgctc tcgcaggcgg
     2341 tggcgaagtc attttatcaa ggtctgtttg gcctggataa agacatgaag gtaaaaaacg
     2401 tcctggcgga aggctatacc gtttctgatg acggtctgac ctacaccatt accctacggc
     2461 agggggtgaa atttcaggac ggcgcggatt ttaatgcggc ggcggtaaaa gcgaatctcg
     2521 atcgcgccag caatccggat aaccacctca agcgttataa cctgtataaa aatatcgcaa
     2581 aaacggaggt cgtcgatccg gcaacggtaa aaattaccct gaaacagccg ttctccgctt
     2641 tcattaatat tctggcgcac ccggcgacgg cgatgatctc gccgcaagcg ctggaaaaat
     2701 atggcaagga tattggtttt catccggtcg gcactggtcc atatcagctt gaaacctgga
     2761 atcagaccga ctttgtcaaa gtgaaaaagt tcgccggtta ctggcagcag ggcttaccca
     2821 agctggattc tattacctgg cgtccggtta ctgacaacaa tacccgcgcg gcgatgctgc
     2881 aaaccggcga agcgcaattt gcttttccta tcccttatga gcaggccgcg ttactggcga
     2941 aaaataaaaa cctcgaactg gtcgccagcc cgtccattat gcagcgttat atcagtatga
     3001 atgtgacgca gaagccgttt gataatccta aggtgcgtga ggcgttgaat tacgctatca
     3061 atcgtcaggc gctggttaaa gtggcgtttg ccggatacgc cacgccggcg acgggcgtgg
     3121 tgccgccgtc gatagcctat gcgcaaagct atcagccgtg gccctatgat ccggctaaag
     3181 cgcgcgaact attgaaagag gcggggtatc cagacggttt cagtaccacg ctgtggtcat
     3241 cgcacaacca tagcaccgcg caaaaagtgt tgcagtttac ccaacagcaa ctggcgcaga
     3301 ttggcattaa agcccggata accgcgatgg acgccggcca gcgcgccgcg gaagttgagg
     3361 gcaaagggca aaaagagagc ggcgtgcgaa tgttctatac cggctggtcg gcgtcgacgg
     3421 gcgaagctga ctgggcgtta tcgccgctct tcgcatcaca aaactggccg ccgacgcagt
     3481 ttaataccgc tttttacagc aacaagcagg tcgacagcga tttggcggcg gccttaaaga
     3541 ctaacgatcc gcaggagaaa acacgattat acaaagaggc gcaggatatt atctggaaag
     3601 agtcgccctg gataccgttg gtggtggaga aattggtttc tgcgcacagt aaaaatttga
     3661 ccggtttctg gattatgccg gataccggtt tcagctttga cgatgcggat ttgaagtaag
     3721 taatgcgatg gggctggatg gcgcgcgcgt tgtccgccat ccggtaaaag gttcgtgtga
     3781 tgcttaacta tgttctcaag cgcctgctgg gattaattcc tacgctgttg attgtggcag
     3841 tgctggtgtt tttatttgtt catttgttgc ccggcgaccc ggcgcggctg atagccggac
     3901 cggaagccga cgcgcaggtg atagcgctgg ttcgtcagca gctggggctt gatcagccgc
     3961 ttcatgtcca gttttggcat tacatcaccc atgttttaca aggcgatttc gggacgtcaa
     4021 tggtttcccg ccgcccggtt tctgaggaga tcgccagccg ctttttgccg acgctgtggc
     4081 tgacgataac cagtatgata tgggcggtgt tgtttggcat ggcgatcggc atcgccgccg
     4141 ccgtgtggcg taatcgctgg cctgaccggg taggaatgac gcttgccgtg accggcattt
     4201 ctttcccggc ttttgcgctg ggaatgttgt taatgcagat tttttccgtg gatctgggct
     4261 ggctaccgac cgtgggggcg gatagctggc aacattatat tttaccctcc ctgacgcttg
     4321 gcgcggcggt ggcatcagtc atggcgcgtt ttacgcgctc ctcgtttgtc gatgtgctga
     4381 gcgaggatta catgaggacc gcgcgggcga aaggcgtcag tgaaacgtgg gtggtgttaa
     4441 aacatggcct gcgcaatgca atgatcccgg tcgtcaccat gatgggactg caatttggct
     4501 ttctgcttgg cggatcgatc gtcgtcgaaa aagtgtttaa ctggccgggg cttgggcgat
     4561 tactggtcga ctccgtcgac atgcgcgact accccgtgat tcaggcagaa gtgctgctgt
     4621 tttctctgga atttattctt atcaacttag tggtggatgt cctctatgcc gccattaatc
     4681 cggctatcag gtataagtaa ggatgcgatt atttaactgg cgccgtcagg cgattttaca
     4741 tgctatgccg gtggtaaaac ccgaccagat acgcacgccg tggcgggagt tctggcgtcg
     4801 ttttcgccgc cagcatgtcg cgttggtcgc cgggggattc gtactggcgt taattctggt
     4861 ggcgattttt gcccgttggc taacgcccta cgatgcggaa aactattttg actacgatag
     4921 cctgaacaat ggcccctctt tgcagcattg gtttggcgtt gactcgctgg gaagagacat
     4981 ctttagccgg gttctcgttg gcgcgcagat ctcactggcg gcgggcgtgt tcgcggtatt
     5041 tatcggcgcg ataatcggca cggtgttggg attgctggcg ggatattatg aaggctggtg
     5101 ggatcgtttc attatgcgca tttgcgatgt gttgttcgcc ttccccggca ttttgctggc
     5161 gattgccgtt gtggcggtgt taggcagcgg tattgctaat gtgatcgttg cggtggcgat
     5221 tttctctatt ccggcgtttg ctcgtctggt gcgcggaaat accctggtct taaaacagca
     5281 gacgtttatt gagtctgccc gcagtatcgg cgccagcgac acgacgattt tgtttagcca
     5341 catcttgccg ggaacggtct cgtcaattgt ggttttcttt acgatgcgta tcggtacgtc
     5401 aattatttcc gcggcaagcc tgtcatttct cgggttaggc gcgcagccgc caacgccgga
     5461 gtggggagcg atgcttaatg aagcgcgggc ggatatggtc atcgcgccgc acgtggcgct
     5521 cttcccggcg gtggcgattt tcctgactgt gctggcgttt aatctgttag gcgacgggtt
     5581 gcgcgatgcg ctggacccga agattaaggg gtaagccagc ccggtggcgt tgacgcctgg
     5641 cgggcctgga accggctcgc caggtggggt aacacattcg gcacccgcgc cgggggaagt
     5701 ggcgttaaac ccgactgccc cacaaatcat attcgtcggc gttttccact ttcacgcgca
     5761 cgatatcgcc cggcttgacg ttggtttcgc cgttcaaata gaccgcgccg tcaatttccg
     5821 gcgcatccgc catgctacgc ccgatagcgc cttcttcgtc aacctcatcg acgatcacca
     5881 gaatttcgcg gcccactttt tcctgcaagc gctcagcgga gatttgctgt tgcagttgca
     5941 taaagcggtt ccagcgctct tctttcacct cttccggcac ctgatccggc agctcattcg
     6001 cgcctgcgcc ttccaccggg ctgtacttga agcagcctac acgatcgagg cgcgcctctt
     6061 tcaggaagtc gagcagcatc tggaagtctt cttccgtttc gccggggaag ccgacaataa
     6121 aggtggagcg tagggtcagt tccgggcaga tttcgcgcca ctgcttaatg cgcgccagct
     6181 ggcggtcaac ggaaccagga cgtttcatca gtttaagaat ccgcgggctg gcatgttgca
     6241 gcggaatgtc cagataaggc aggattttgc cttccgccat tagcggaatc acatcatcaa
     6301 cgtgtgggta ggggtagacg tagtgcagac gtgtccagac gcccagtttt gataactgct
     6361 cgcacaggct caccatactg gttttcatcg gttcgccatt atggaatccg gtgcggtgct
     6421 tcacatctac gccgtaggcg gaggtatctt gcgaaatcac cagaatctct ttgaccccgg
     6481 catcaaccag acgtttcgct tcgcttaata cgtcgccaat cggacggctg accagatccc
     6541 cgcgcatcga cgggatgatg cagaacgtgc agcggtgatt acagccttca gaaattttca
     6601 gatacgcata atggcgcggc gtcagtttta caccctgttc cggtacgagg cttaaaaatg
     6661 gattgtgctt cggcttcggt acgtaatgat gtacgtgctg cagaacttgc tcatagctat
     6721 gcggcccggt gatttccagt actttcggat gcacttcgcg gatctgatct tcttttgcgc
     6781 ccaggcagcc ggtgacgatt accttaccgt tttcgttcag cgcttcgcca atggcttcca
     6841 gtgactcttg taccgcgctg tcaataaagc cacaggtatt aacgataacc atatccgcat
     6901 cgtcatagtg tggcacaacg tcatagcctt cggtacgcag ctcagtcagg attcgttccg
     6961 aatcaacgag gtttttcgga cagcccaggg aaacgaagcc gatctttggc tggtgggtta
     7021 cattactcat agcttaaaaa gtgttcattt attggaatgg tcagggcagg gattctacag
     7081 atatccgaac aaaaattgta tcgcaatctc atcaggagcg gcggcatcaa ccgttgtggt
     7141 tatcagcaaa aggtgaaaaa gggcaattct aagaaaattc ttgatctctg acaccccttt
     7201 gtctaaaaaa cgaccatact attaagttga accctggtag aaaagaggag gaaaaaaggt
     7261 atggtcgttg acagactgag aaccgatctt ctcaacaagc tgataaacgc gcgtatcgat
     7321 cttgccgctt atctgcaatt gcgaaaagcg aaggggtata tgtcagtcag cgaaagtgac
     7381 actctgcgtg acaatttttt tgaactgaat cgcgagctcc acgatcacgc tttacggcag
     7441 ggactgcatc tcgatcagga agagtggaac gcgctgcgcc gtgccgaagg cgcgcttgca
     7501 gccgccgccg tttgtttaat gagtggacac catgattgtc cgacctttat tgccgtcaac
     7561 gcagataaac ttgaaaactg tctgacaact ttgacgctga gtattcagag tctgaaagca
     7621 cattcaccgc ttacacaggt ctgaataagg gggaggcgac tccccctttt taccggaccg
     7681 cgccgcttaa tgttttgtaa aaataaaccc gacctcttgc gatgctgact acgctttaac
     7741 gcagagccct gaaggaggcg gtatgcgtcg aatacttctc gcgatagttt cattctctct
     7801 tttctcttca tgggcgaacg ccaatcttgc gccggtgaac gttgaggtgc tgcaaacccg
     7861 actcgatcac ccgtggtcgc tggctttttt gccggataac cgtgggatgc tcattaccct
     7921 gaaaggggga caactgcgcc actggcagac ggggcgggga ctttccgatc cgctggctgg
     7981 cgtaccgaaa gtgtgggcaa acgggcaggg aggtttgctg gacgtcgtgc tggcgcctga
     8041 ttttgcccag tcgcgccgcg tctggctgag ctatgctgaa gctgaccgcg aaggaaacgc
     8101 cggtacggca gccggctttg gacggctgag cgacgatttt cagcgtctgg agcattttcg
     8161 taccgtgttt cgccagatgc ctaagctgtc taccggcaac catttcggcg gacgtatggt
     8221 attcgatgcg caagggtttc tttttattgc cctgggtgaa aataaccagc gcgctaccgc
     8281 gcaggatttg gataaattac agggtaagct ggtgcgcctg accgggcagg gcgaaattcc
     8341 gccggataat ccgtttgtac atcaggcggg cgcgcgtccg gaaatctggt cttacggtat
     8401 tcgtaatccg caggggctgg ccatcaatcc ctggagcggc gcgctatggc tgcatgaaca
     8461 cggtccgcgc ggcggcgatg aaattaacat cccggaaaaa ggcaaaaatt atggctggcc
     8521 gctggccaca tggggcgtca actatagtgg tctgaaagtg ccggaagcca aaggtgaaat
     8581 tgtcgaggga acggagcaac cggtttacta ctggaaggat tctccggcga tcagcgggat
     8641 ggctttttat gccagcgacg tttttgcgcc gtggcggcac aaactgttta tcggcgcgct
     8701 aaaagataaa gaggtcattg tgatgcgcgt cgatggcaat acggtgacgg aagaaggccg
     8761 tattctgggt gacagaaagc agcgtattcg ggatgtgcgt gtcggacctg acggctactt
     8821 atatgtgtta accgatgagt ccgacgggca gttactcaag gtaagtcctg cagccacgcg
     8881 ttaggtcacc gggatcatca ccactttgcg aaaagcaggg cgctcggtaa gctgttgata
     8941 ccagcgttgc agattcgggc gcggcgtcca cttcagaccc acgttcagca ggttatagac
     9001 gaagggcgca atagcgatat cgccggtgcc aaagttatcc cctgagaacc acggctggtg
     9061 ggccagcgca tcatcaagaa gcgcaaacag gctatcacac ttttcgatac cggcttcaat
     9121 tgccgcctgg tcgcgttttt ccggcggggt tctgaccagt cccatcagga tcacgcggtg
     9181 cgccgggctt aacgtttgat tcgcccagtc catccatttt tcgccctccg cacgccgtgc
     9241 cggattatca acccatagcc ggttctggcc gtattgcgcc gccagatagc ggacaatggc
     9301 attggattcc cacaataaca ggtcggtttc atcatcttta agcagcggca ccagcccatt
     9361 aggattcatc gccagatagt cggcatcctg gttaacgccg aattttccac ctgccagaat
     9421 ttgatcgtat ggcagttcca gctcttcaag cgtccacaac acttttttaa cattagtcga
     9481 gttgttccgg ccccacagcg taatcatatt aaccccttct gttttatcag gatgatgaca
     9541 gtaatcggcc taccgtgaga taaacctaac atttacacaa tggtctgtaa aaaaatcgtt
     9601 atgaaggaag cgtaacggga tgttattgca taaactttaa aaactttacc aagttacggt
     9661 ttctttaacg tcgtgagtgc gttattactc accgcactta ttacacggtg gtgtgacgtg
     9721 tgtttttgga atggatactc gggtggtact atgacgcaat acgcttcttc ccttcgtagc
     9781 ctcgcggcag gttcggttct cttattcctt ttcgcttcgc ctgtaaaggc agaggaacaa
     9841 acgatcgcgc cgccgggcgt tgatgcgcga gcctggatct taatggatta cgccagcggt
     9901 aaagtactgg cggaaggcaa cgccgatgag aaactcgacc ctgccagttt gacaaaaatt
     9961 atgaccagct acgtggtggg ccaggcgctg aaggcaggca aaatcaagct gaccgatatg
    10021 gtgacggtgg gcaaagatgc ctgggcgacg gggaacccgg cgctacgtgg gtcgtcggtg
    10081 atgtttctga agcccggcga tcaggtgtcg gttgcggatc ttaataaagg catcatcatt
    10141 cagtcaggta atgatgcctg tatcgcgctt gccgactacg tcgccggaag ccaggagtcc
    10201 tttatcggcc tgatgaatgc ctatgcgaaa cgattggggt taaccaatac aaccttccag
    10261 acggtacacg gccttgatgc gccagggcag ttcagtaccg ctcgcgatat ggcgctgctc
    10321 ggcaaggcct tgattcacga tgtgcctgac gaatacgcca ttcataaaga gaaagaattt
    10381 acttttaata atattcgtca gccaaaccgc aaccgcctgt tgtggagtac caatctgcat
    10441 gtcgacggca tgaaaacggg gacaacggca ggcgctggat ataaccttgt cgcctccgcc
    10501 acccagggcg atatgcgcct gatctctgtc gtgctggggg cgaaaacgga ccgtattcgt
    10561 tttaatgagt cagaaaaact gctgacctgg ggtttccgct tctttgaaac ggtcacgccg
    10621 attaaacctg acgcgacatt cgtgacgcaa cgggtctggt ttggcgataa gcgtgaggtc
    10681 aatttgggag cgggcgatgc ggggtctgtg acgattccgc gtgggcagct taaaaacctg
    10741 aaggccagct ttacgttgaa cgaaccacag ctcacggcgc cattgaagaa agggcaggtt
    10801 gtcggcacca tcgatttcca gcttaacgga aaatccattg agcaacgccc gttaatggtg
    10861 atggaaaacg tcgaggaggg gggatttttc agccgtatgt gggattttgt gctgatgaaa
    10921 ctccatcagt ggtttggcag ttggttctcg taaaataacc ccgttgccgg gtgcgcgtcg
    10981 catccggcaa acctgcggtt aatacatcag agtaatttgt tgcgctttag cgtaggccac
    11041 aaaggcctca tcgggacggc ggtcgctgat aatcgtatca aagcgtgata attcccccat
    11101 ccgcgccgga cgtaccttgc cgaatttact gtgatccacc accagtacat ggctctgggc
    11161 cattgtcatg gcccaatgtt ttaccggcag ctcttccaga ttaaagcagg tagcgccttt
    11221 actggtatga acgccggcgg cggaataaaa cgcgatatcc ggacaaatat tgtttaacgt
    11281 ttcatggaaa tcaagcggtt tgaaaatggc gttgctggcg tgaaactccc cgccgctgag
    11341 gatggcgcgg caatggggtt tgtcctgcag cgccagaaag gtattaagtg aatagcacac
    11401 cgccgtaaag ggaagatcat tatcaatagc ttcaatgatc cacggcgtgg tggtgccgca
    11461 gtcaataaat accgtctgat gcgcttgtac caagcccgca gccaactgag cggcacggcg
    11521 tttttcttcc accagacgag atttttgatc gcttaacaga taatgactgg cgctgcgggg
    11581 ctccagtacg atatagccgc ccagcaacac gacaggcgcg cttttatggt tcaggtcgcg
    11641 acgaatggtc atttcagaga cgcccaacag ggtcgcggct tctttaagat gaagtttatc
    11701 gctgcgtttt aaggcctgca gcaattgacc aatacgctcg tcgcgtcgcg tttccatagt
    11761 tcccctggag agttaaataa gcgctccgca ccatacagag cgcttaatat tactcttttt
    11821 ttcgctattt agtcacgtac ccagcctttt cgaatgggca atgcgaaaca gaaacggtaa
    11881 caacgttgca gcgcctggta gagcggcgcg ccgtaccatt gccagatcag ctgtgcgctc
    11941 aggcagccaa gcatcgctac cagcagcgcg ccaatcatat ctaacggcca gtgtacgccg
    12001 agatagacgc gcgaccaggc gatggtcatg gctatcgcca tcatcacgat gcctgaccag
    12061 aggcggtgcc agaacaaaaa cgccagcgca aaggtaaaaa tcaccgtacc gtgatcgctg
    12121 gggaacgagt catcggcggc atgatgcagg aagttatagc cgatatgatc gacaaacgga
    12181 cggtcgtgcg ggaaaaggtg tcccattgtc caggagaccg ccagactgat aatcagcgcg
    12241 atgccgattt taacgatcag ctggcgctgg gcgcagaccc gatcgcgggg cccccacagc
    12301 cagagtacca cggctaagag cgggacgatg ttgatgacat ctttggcgat aaagatagcg
    12361 agcgaaatta tccactgcgc ggaatcaggc gtggcgttaa taaaataaaa cagcgagttg
    12421 ttaaggtttt ccagcataac atccaggctc ggagcaatga aatcaaaagg gatagccagc
    12481 tcatccccgt gcaaactgag cataaatgca gcgtaacagg gaggaaaagc agtattgtct
    12541 tatttggcgg caacatgaag agatttaaga caatggcata aaataacgtt gatgataacg
    12601 gcgcaaactt aaattaacct taaagtacgc aagcgctaag cagctttctg taaaaatgtg
    12661 cgctatttcc cttgcagcct cataattcgc tatctcagtt ccccgacttt cattacactc
    12721 tgcgcggttt ttattggcga agagatggta tgcagaatcg tttacaatca ggcggcaggc
    12781 tgggacgtca ggcgctgctt tttcctctct gtctggtgct gtacgagttt tctacttata
    12841 ttggcaacga catgatccaa ccgggtatgc tggcggtggt tgagcagtat caggcgggcc
    12901 tggactgggt tccgacgtcc atgaccgctt atctggcggg cggtatgttc ttacaatggc
    12961 tgcttggccc gttgtctgac cggattggcc gtcgtcccgt gatgctggcg ggcgtcgtgt
    13021 ggtttattgt cacctgcctg gcgacgttac tggcgaaaaa catcgaacaa tttacattcc
    13081 tgcgtttttt gcaagggatt agcctgtgtt ttatcggcgc tgtagggtat gccgcgattc
    13141 aggaatcctt tgaggaggcg gtgtgtataa aaattaccgc gctgatggcg aacgtggcgt
    13201 taatcgcgcc gctactggga ccactagttg gggcggcatg ggtgcatgtt ctgccgtggg
    13261 aggggatgtt tattttattt gccgcactgg ccgctatcgc ctttttcggg ctacagcgcg
    13321 caatgccgga gaccgccacg cggcggggcg aaacgctgtc atttaaggcg cttggccggg
    13381 attatcggct ggtgataaaa aatcggcggt tcgtcgcagg ggcgttagcg ctgggatttg
    13441 tcagcctgcc gctgttggcc tggattgcgc agtcgccgat tatcatcatt agcggcgaac
    13501 agctcagcag ctatgaatat ggtttgctgc aggtgcccgt ttttggcgcg ctcattgccg
    13561 gtaatctggt gttggcgcgt ttaacctccc gacgtacggt tcgctcgctg atcgtgatgg
    13621 gcggctggcc tatcgtcgcg gggctgatca tcgccgcggc ggcgacggtg gtttcatccc
    13681 atgcttattt atggatgacg gcgggattaa gcgtatacgc ttttggcatt gggctggcga
    13741 atgccggact ggtgcgtctg acgctctttt ccagcgatat gagtaaagga acggtctcgg
    13801 cggcgatggg aatgctacaa atgctgattt ttaccgttgg cattgaagtc agtaaacacg
    13861 cctggttaag cggcggcaat gggctattta gcctgtttaa tctggcaaac ggtattcttt
    13921 ggctactgct gatgctggtc ttcttaaaag ataagcggac ggggaatttg caaacagtct
    13981 gagagagcgg ctacgcctga taagctttct gttatcaggc gtagagaggc atccgctaga
    14041 cgttgaacgg cggctcgttg tttaatacgc tgtcgatgat atccagcacg ccttcctgat
    14101 tgttcgatcc ggcgcggtat ttcgccgccg ccgcgaccgc ttcgctggcg tgcgacatgg
    14161 caaaactaaa cccggcctga cgcagcatct caatatcgtt gccgccgtcg ccgaatacca
    14221 ccacttcact atcatgaatg ccccagcgct gctgtaacag acgcaggccg ttggctttat
    14281 gcacgccggg aattattaaa tcaatactgc catagccggt atgaacgggg accatgatat
    14341 cgccaatggc gtcgtgcagc gccgcctgta cttccggtat ccgttcatcg gtaatattaa
    14401 ggccgaattt gaaaaaaaca tcgctgatat tgttgaaatt atccacaaac tccagacgat
    14461 gataatacat tgccgcaacg gcttttaacg catcgtcgta ccgtttcagc gtgtaggcgc
    14521 tgttttttcc acaggcgatg atctccacat cggcgcgtgt gagcaggtgt tcgacaaccg
    14581 cctggaagtc ggcttttgcc agctcgccgt taaaaacatc ctctccttcg ctgaccaccc
    14641 agccaccgtt ttccgcgaca aaagcgattt cgtgcgcaat ttccggaaag aaggagatta
    14701 actggtaata ctggttgccg ctggccacga caaagcgaat gccttgccgc ttcatttgtt
    14761 ggtactgcgc cataaaccgg tcacggttat aggttttttg atcgctcaga aaagtgccgt
    14821 ccatgtcgac ggcgattaat ttaatactca tgcgttatgc tccatcaccg gttgcggagt
    14881 cgatacaggt ttggcgacgg ccttcgccac cagcgctgcc agaataacca gcgccagcac
    14941 aaccatcatg gcgctgcgta atccatag
//
LOCUS       DAGWFR010000094        14960 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.096, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000094 DAGWFR010000000
VERSION     DAGWFR010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 14960)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14960)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14960
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.096"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..342
                     /locus_tag="MOX77_002907"
     CDS             <1..342
                     /locus_tag="MOX77_002907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein I (serine
                     chemoreceptor protein)"
                     /protein_id="HCA3358377.1"
                     /translation="GATMDAILRGVTEVTTIMKQIASASEEQSKGISQVGVAITQMDS
                     VTQQNAALVEQVSAAAAALERQTEDLQRSVQQFRLSASEPQQRVTTKAAPGVQRMASA
                     PAQSTDEWVAF"
     gene            427..714
                     /locus_tag="MOX77_002908"
     CDS             427..714
                     /locus_tag="MOX77_002908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2623 domain-containing protein"
                     /protein_id="HCA3358378.1"
                     /translation="MNNHFGKGLMAGLHAPYAYSAHHAVNFCSEYKRGFVLGFTHRMF
                     EKTGDRQLSAWEAGILTRRYGLDKEMVMDFFKENHSGMAVRFFMAGYRLEG"
     gene            904..2022
                     /gene="hybO"
                     /locus_tag="MOX77_002909"
     CDS             904..2022
                     /gene="hybO"
                     /locus_tag="MOX77_002909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 2 small subunit"
                     /protein_id="HCA3358379.1"
                     /translation="MTGDNTLITSHGINRRDFMKLCAALAATMGLSSKAAAEMAESVS
                     NPQRPPVIWIGAQECTGCTESLLRATHPTVENLVLETISLEYHEVLSAAFGHQVEENK
                     HNALEKYKGQYVLVVDGSIPLKDNGIYCMVAGEPIVDHIRKAADGAAAIIAIGSCSAW
                     GGVAAAGVNPTGAVSLQEVLPGKTVINIPGCPPNPHNFLATVAHIITYGTPPKLDAKN
                     RPTFAYGRLIHEHCERRPHFDAGRFAKEFGDEGHRQGWCLYHLGCKGPETWGNCSTLQ
                     FCDVGGVWPVAIGHPCYGCNEEGIGFHKGIHQLAHVENQTPRSEKPDVNMKEGGNISA
                     GAVGLLGGVVGLVAGVSVMAVRELGRQQKKDNADSRGE"
     gene            2025..3011
                     /gene="hybA"
                     /locus_tag="MOX77_002910"
     CDS             2025..3011
                     /gene="hybA"
                     /locus_tag="MOX77_002910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 2 operon protein HybA"
                     /protein_id="HCA3358380.1"
                     /translation="MNRRDFIKAASGGALLLGAAPSVSHAAAENRPPIPGSLGMLYDS
                     TLCVGCQACVTKCQDINFPARNPEGEQTWSNNDKLSPYTNNIIQVWRSGTGVNKDQEE
                     NGYAYIKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVP
                     KYDYNNPFGALHKCELCNQKGVERLDKGGLPGCVEVCPAGAVIFGTREELMAEAKKRL
                     ALKPGSEYHYPRQTLKTDDTYLHTVPKYYPHLYGEKEGGGTQVLVLTGVPYEDLDLPK
                     LDDLSTGARSEHVQHTLYKGMILPLAALAGLTVLVRRNSKNDHHDGGDDHES"
     gene            3001..4179
                     /gene="hybB"
                     /locus_tag="MOX77_002911"
     CDS             3001..4179
                     /gene="hybB"
                     /locus_tag="MOX77_002911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni/Fe-hydrogenase cytochrome b subunit"
                     /protein_id="HCA3358381.1"
                     /translation="MSHDPKPLGGKIISKPVIIFGPLIVLCMLLIVKRLVFGLGSVSD
                     LNGGFPWGVWIAFDLLIGTGFACGGWALAWAVYVFNRGQYHPLVRPALLASLFGYSLG
                     GLSITIDVGRYWNLPYFYIPGHFNVNSVLFETAVCMTIYIGVMALEFAPALFERLGWK
                     VSLKRLNKVMFFIIALGALLPTMHQSSMGSLMISAGYKVHPLWQSYEMLPLFSVLTAF
                     IMGFSIVIFEGALVQAGLKGNGPDEKNLFVKLTNTISVLLAIFVVLRFGELIYRDKLS
                     YAFAGDFYSAMFWIEVVLMVFPLVVLRVAKLRNDSRMLYLSALSALLGCATWRLTYSL
                     VAFNPGGGYHYFPTWEELLISIGFVAIEICAYIVLIRLLPILPPLKQNDHNRHEASKA
                     "
     gene            4176..5879
                     /gene="hybC"
                     /locus_tag="MOX77_002912"
     CDS             4176..5879
                     /gene="hybC"
                     /locus_tag="MOX77_002912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 2 large subunit"
                     /protein_id="HCA3358382.1"
                     /translation="MSQRITIDPVTRIEGHLRIDCEIENGVVSKAWASGTMWRGMEEI
                     VKNRDPRDAWMIVQRICGVCTTTHAISSVRAAESALNIDVPVNAQYIRNIILAAHTTH
                     DHIVHFYQLSALDWVDITSALKADPEKASAMLDGVSSWHLNSAQEFTKVQNKIKDLVA
                     SGQLGIFANGYWGHPAMQLPPEVNLIAVAHYLQALECQRDANRVVALLGGKSPHIQNL
                     AVGGVANPINLDSIGTLNLERLMYIKSFIDKLSDFVEQVYKVDTAVIAAYYPEWLERG
                     KGAVNYLSAPEFPTDGKNGSFLFPGGYITNADLSTYRPITSHSDEFLIKGIQESAKHA
                     WYKDEAPQAPWEGTTIPAYDGWSDDGKYSWVKSPTFYGKTVEVGPLANMLCKLAAGRE
                     STQTKLNEIIALYQKLTGKTLEMAQLHSTLGRIIGRTVHCCELQNVLQDQYNALIVNI
                     GKGDYTTFVKPNIQATGEFKGVGFLEAPRGMLSHWMVIKDGIISNYQAVVPSTWNSGP
                     RNFNDDVGPYEQSLVGTPIADPAKPLEVVRTIHSFDPCMACAVHVVDADGNEVVSVKV
                     L"
     gene            5879..6373
                     /locus_tag="MOX77_002913"
     CDS             5879..6373
                     /locus_tag="MOX77_002913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016157468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HyaD/HybD family hydrogenase maturation
                     endopeptidase"
                     /protein_id="HCA3358383.1"
                     /translation="MRILVLGVGNILLTDEAIGVRIVEALEQRYTLSDFVEILDGGTA
                     GMELLGDMANRDHLIIADAIVSKKNAPGTIMVLRDDEVPALFTNKISPHQLGLADVLS
                     ALRFTGEFPKKLTLVGVIPQSLEPHIGLTPTVEAMIEPALEQVLAALRESGVEAIPKE
                     TAHV"
     gene            6366..6854
                     /gene="hybE"
                     /locus_tag="MOX77_002914"
     CDS             6366..6854
                     /gene="hybE"
                     /locus_tag="MOX77_002914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase-2 assembly chaperone"
                     /protein_id="HCA3358384.1"
                     /translation="MSETFSGFDTAPVARVQAAFEEIAHRSMHDLSFLHPTMPVHVSD
                     FTLFEGQWTGTVITPWMLSALIFPGPDQIWPGRTVGEKLGLQLPYGTMTFTVGELEGV
                     SQYLACSLMSPLSRSLSPEEGVRLADDCARMLLSLPVSNPDAPQTSRRALLFGRRSCE
                     NA"
     gene            6847..7188
                     /gene="hypA"
                     /locus_tag="MOX77_002915"
     CDS             6847..7188
                     /gene="hypA"
                     /locus_tag="MOX77_002915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation nickel metallochaperone
                     HypA"
                     /protein_id="HCA3358385.1"
                     /translation="MHELSLCQSAVEIIQQQAEQHGVARVTGVWLEIGALSCVEERAV
                     RFSFDIACQGTLAQGCELHIDYRPAQAWCWDCSQVVEILRHDAQCPHCHGDRLRVDTG
                     DSLKVKSIEVE"
     gene            7216..7464
                     /gene="hybG"
                     /locus_tag="MOX77_002916"
     CDS             7216..7464
                     /gene="hybG"
                     /locus_tag="MOX77_002916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation factor HybG"
                     /protein_id="HCA3358386.1"
                     /translation="MCIGVPGQVLAVGDDIHQLAQVEVCGIKRDVNIALICEGKPADL
                     IGQWVLVHVGFAMSIIDEDEAKATLDALRRMEYDITSA"
     gene            7540..8592
                     /locus_tag="MOX77_002917"
     CDS             7540..8592
                     /locus_tag="MOX77_002917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HCA3358387.1"
                     /translation="MNKFLRQLSLLALLFCWPLMSQAARTFTDQLGRQVTVPDTLDRV
                     VVLQHQTLNLLVQMNATDKIVGVMANWKQQLGDGYARLAPELAQKASLGDLTHVDPEK
                     LVALRPQVVFVTNYAPQEMIDKISRLGIPVVAISLRHDVAGEQAKMNPTLADEEQAYN
                     RGLREGITLIGDIVNKPQEAKALIEAMNKGRKMVSDRLQSVPENERVRAYMANPELTT
                     YGSGKYTGLMMAHAGALNVAASSAKGFKQVTMEQVIAWDPQVIFVQNRYPKVVNEILH
                     NPQWQVIDAVKHHRVYLMPDYAKAWGYPMPEAVGIGELWMAKKLYPEKFHDIDMQKAA
                     NDWYQRFYRTDYQGVQ"
     gene            8592..9302
                     /locus_tag="MOX77_002918"
     CDS             8592..9302
                     /locus_tag="MOX77_002918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HCA3358388.1"
                     /translation="MRILAAGSLRVVWPQLMTAFQADAVCDFGPAGLLRERIEAGEAC
                     DFFASANLAHPQALLESGRALRVAPFTTNRLCLSVRAQAMREGEDWLSLLTRRDLRIG
                     TSTAGCDPSGDYTQQLFSRMGKEGEAIRKRAVALVGGRQTLPLPAGRLAAEWLINHDY
                     TDIFIGYASYAPRLRQVNSLRVVDIPEPYNPVAEYGFACLSEQGKTLADFLLSARARL
                     ILMQHGFSEAPHMTHSQN"
     gene            complement(9370..10236)
                     /gene="yghU"
                     /locus_tag="MOX77_002919"
     CDS             complement(9370..10236)
                     /gene="yghU"
                     /locus_tag="MOX77_002919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-dependent disulfide-bond
                     oxidoreductase"
                     /protein_id="HCA3358389.1"
                     /translation="MADNTYQPAKVWTWDKSGSGAFANINRPVSGPTHDKTLPVGKHP
                     LQLYSLGTPNGQKVTIMLEELLALGVTGAEYDAWLIRIGEGDQFSSGFVDINPNSKIP
                     ALRDNSYNPPIRVFESGAILVYLADKFGHFLPQDLAKRTETLNWLFWLQGAAPFLGGG
                     FGHFYHYAPVKIEYAINRFTMEAKRLLDVLDKQLAHHPYVAGEEYTIADMAIWPWFGN
                     VVLGNVYDAAEFLDAGSYQNVQRWAKQVAERPAVKRGRIVNRTNGPLNERLHERHDAS
                     DFENHTEDKRQS"
     gene            10463..12319
                     /gene="gss"
                     /locus_tag="MOX77_002920"
     CDS             10463..12319
                     /gene="gss"
                     /locus_tag="MOX77_002920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutathionylspermidine
                     amidase/synthase"
                     /protein_id="HCA3358390.1"
                     /translation="MSKGTTSQDAPFGTLLGYAPGGVAIYSSDYNSLDPWDDDDAAFR
                     SYIDDEYMGHKWQCVEFARRFLFLNYGVVFTDVGMAWEIFSLRFLREVVNDNILPLQA
                     FPNGSPRAPEAGALLIWQKGGEFNETGHVAIITQLLDNKIRIAEQNVIHTPLPPGQQW
                     TRELEMVVENGCYTLRDTFDDTTILGWMIQTDDTQYSLSQPDIANQSLAIRGARLPEK
                     GQFDGQWLDERDPLQKAYVQANGHVINQDPYQYFTITESAEQELIKATNELHLMYLHA
                     TDKVLKDDNLLALFDIPKILWPRLRLSWQRRRHHMITGRMDFCMDERGLKVYEYNADS
                     ASCHTEAGLILEKWAEQGYTGKGHNPAEGLINELAGAWKHSKARPFVHIMQDDDIEED
                     YHAQFMQQALHQAGFASKILRGLGELRWDDAGQLIDGDGRLVNCVWKTWAWETAMEQI
                     REVSETEYAAVPIRTGHPENEVRLIDVLLRPEVLVFEPLWTVIPGNKAILPILWSLFP
                     HHRYLLDTDFTVNDELVQTGYAVKPIAGRCGSNIDLVSHQEELLDKTSGKFATQKNIY
                     QQLWCLPKVAGKYIQVCTFTVGGNYGGTCLRGDDSLVIKKESDIEPLIVIKA"
     gene            12989..14044
                     /locus_tag="MOX77_002921"
     CDS             12989..14044
                     /locus_tag="MOX77_002921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CZB domain-containing protein"
                     /protein_id="HCA3358391.1"
                     /translation="MFKKVLGLRHWNNNVVKIPPPAESGANASDVVVDTPEPYERILC
                     QKILMGISTIDIIRNAIIKSCEQLNIEKERINELNEQNDKARSSLKSLVEFITEIGTT
                     SSDIGCRMGDLNTSLTQINACIKEIQKIANQTNLIAINSAIEAARVGDAGRGFSVISK
                     EVKNLSEDVKHSSKSVSTLTSVIKDNTARVSEVLDNQQPVIDNITTNINQIVESIGIV
                     IDKSLSMKSVMQYISTVQFLNIVKVDHVIWKMEVYKLLLNKDINSKITMHDQCRLGKW
                     YYGFEGQQFSNYYSFRSLEAPHKEVHTAGHSALNYFAAGDMNAMSQELDRMERSSNEV
                     VNQLEMLAVDLLKETTV"
     gene            complement(14344..>14960)
                     /locus_tag="MOX77_002922"
     CDS             complement(14344..>14960)
                     /locus_tag="MOX77_002922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glucuronate isomerase"
                     /protein_id="HCA3358392.1"
                     /translation="ETLSELEIAQFTTAVLVWLGRQYAARGWVMQLHIGAIRNNNTRM
                     FRLLGPDTGFDSIGDNNISWALSRLLDSMDVTNELPKTILYCLNPRDNEVLATMIGNF
                     QGPGIAGKVQFGSGWWFNDQKDGMLRQLEQLSQMGLLSQFVGMLTDSRSFLSYTRHEY
                     FRRILCNLLGQWAQDGEIPDDEAMLSRMVQDICFNNAQRYFTIK"
BASE COUNT         3528 a         3660 c         4134 g         3638 t
ORIGIN      
        1 ggcgcgacga tggacgccat cctgcgcggc gtcacggaag tgacgacgat tatgaaacag
       61 atcgcgtccg cctccgaaga gcagagtaaa ggtatctctc aggttggcgt ggcgatcacg
      121 caaatggata gcgttacgca acaaaacgcc gcgctggttg agcaggtttc cgccgcggcg
      181 gcggcgctgg aacggcagac ggaggatttg caacgctccg tacagcagtt ccggctttcc
      241 gctagtgagc cgcaacaacg cgtaacgacg aaagcggcgc ctggcgttca gagaatggcg
      301 tcggctcccg cacagtctac tgatgaatgg gttgccttct gatgtgaagc aaaaaagcgc
      361 gtaatgcgct ggccttcatt taaccagttg ctatataatt tattatatag cgactaagga
      421 ggtcagatga ataatcattt tgggaaaggg ttaatggccg ggttgcacgc gccatatgca
      481 tatagcgcgc atcatgcggt gaatttctgt tctgagtata aacgtggctt tgtattgggt
      541 tttacacacc gtatgttcga aaagaccggc gatcgtcaac ttagcgcgtg ggaggccgga
      601 attctgacgc gtcgctatgg tctggataaa gaaatggtga tggatttctt taaagagaat
      661 cattccggga tggcggttcg cttctttatg gctggttatc gactcgaagg ttgatccaac
      721 aggggtatta tcttgcttta attaattaca ctatcgcctc ttcccttcgt tttactgttc
      781 cgtcgaagta ttatggcgca cataaccata aaaaaagtgt ggtaaatggc gtaccgatcg
      841 caataacttc ttcgcgaaca gtgcaaaata aaagctaggt cttcgtaacg gaataactat
      901 aaaatgactg gagataatac tctcatcact tctcacggca ttaaccgtcg tgatttcatg
      961 aagctttgtg cagcactggc cgctactatg gggctcagta gcaaagccgc cgcagaaatg
     1021 gcagaatcgg tatccaatcc acagcgtccg cccgttatct ggattggcgc tcaggagtgt
     1081 accggttgta ccgaatcact gcttcgtgct acacacccaa ccgttgaaaa cctcgttctg
     1141 gagactatct ctctggaata ccacgaggta ctttccgccg cattcggtca ccaggtcgaa
     1201 gaaaacaaac ataacgctct ggagaagtat aaagggcaat atgttctggt ggtggatggt
     1261 tctatcccac taaaagataa cggtatctac tgcatggttg ccggcgagcc gatcgtggat
     1321 cacatccgca aagccgccga cggcgcagcc gcgattatcg ctatcggttc ctgctcggca
     1381 tggggcggcg ttgctgcggc tggcgtaaac ccaaccggcg ctgtcagtct gcaggaagtc
     1441 ttaccgggca aaacggttat caatattcca ggttgtccgc caaacccgca taacttcctg
     1501 gcgaccgtcg cgcatatcat cacttacggc acgccgccga agctggatgc gaaaaatcgt
     1561 ccaacctttg cctatggccg tctgatccat gagcattgcg aacgtcgtcc acacttcgac
     1621 gcaggccgtt ttgccaaaga atttggcgac gaaggccacc gtcagggctg gtgcctctac
     1681 catcttggct gtaaagggcc ggaaacctgg ggcaactgtt ctacattaca gttctgtgac
     1741 gttggcggcg tctggccagt ggcgatcggt catccttgct atggctgtaa cgaagaaggt
     1801 atcggcttcc ataagggcat tcaccagctt gctcatgtcg aaaaccaaac tccgcgttca
     1861 gagaaacctg acgtcaatat gaaagaaggc ggcaatatct ctgcgggcgc tgtcggtctg
     1921 cttggcggcg tagtcggtct ggttgccggc gtcagcgtga tggcggtacg tgaactgggg
     1981 cgtcagcaaa agaaagataa cgctgactca cggggagaat aaccgtgaac agacgtgact
     2041 ttattaaagc agcctccggt ggagcattgc tgttgggcgc cgcgccgtct gtcagccatg
     2101 cggctgcaga aaaccgtccg ccaattccag gttcgctggg catgctgtat gactccactc
     2161 tgtgcgtggg ctgtcaggcc tgcgtcacaa agtgtcagga tatcaacttc ccggcgcgta
     2221 acccggaagg ggagcagacc tggtcgaaca acgacaaact gtcgccgtat accaataaca
     2281 ttatccaggt atggcgtagc ggcacgggcg tgaacaaaga tcaggaagag aacggctatg
     2341 cctacatcaa gaaacagtgt atgcactgcg tcgatcctaa ctgcgtttcc gtttgtccgg
     2401 tgtcggcgct gaaaaaagat ccgaaaaccg gcatcgtcca ctatgacaaa gatgtctgca
     2461 ccggctgccg ttactgtatg gtcgcctgtc cgtacaacgt acctaagtac gactacaaca
     2521 acccgtttgg cgcgcttcac aagtgtgagt tgtgtaacca gaaaggcgtt gagcgtctgg
     2581 ataaaggcgg tttgcctggg tgtgtggaag tttgtccggc aggggccgtc attttcggta
     2641 ctcgtgaaga gctaatggcg gaagcgaaaa aacgtctggc cctcaaacca ggcagtgaat
     2701 atcactatcc gcgccagacg ttgaaaacgg acgacaccta tctgcatacg gtgcctaaat
     2761 actacccaca cctctacggt gaaaaagagg gcggtggtac tcaggtgctg gtgctgacag
     2821 gcgttcctta tgaagatttg gatctgccga agctggatga cctttcaacc ggagcgcgct
     2881 ccgagcatgt tcaacacacg ctttataaag gcatgatact acccctggct gcgctggcgg
     2941 gcttaaccgt gctggttcgt cgtaatagca aaaacgacca tcacgatgga ggagacgatc
     3001 atgagtcatg atccaaaacc gctgggcgga aaaatcatca gtaaaccggt cattattttt
     3061 ggaccgttaa tcgtcctgtg tatgctcctt atcgtgaagc gtctggtctt cgggttgggc
     3121 tccgtttccg acctgaacgg cggtttcccg tggggcgtct ggattgcctt tgacctgttg
     3181 atcggcaccg gctttgcctg cggcggttgg gcgttggcat gggcggtgta tgtctttaac
     3241 cgtgggcaat accatccgtt ggtgcgcccg gcattgctgg caagcttgtt tggttactcg
     3301 ctgggcggcc tgtcgatcac tatcgacgtc ggtcgttact ggaacctgcc gtacttctac
     3361 attccaggtc acttcaacgt gaactcggta ctgtttgaga cggcggtctg tatgaccatc
     3421 tacatcggcg tgatggcgct ggagtttgcg cctgccttgt ttgaacgtct gggctggaaa
     3481 gtgtcgctca agcgtctgaa taaggtgatg ttctttatta tcgcgctggg cgcgctgctg
     3541 ccgacgatgc accagtcctc aatggggtca ttgatgatct cggcgggcta taaagtgcat
     3601 ccgctatggc aaagctatga aatgctgccg ctgttctcgg ttctgaccgc gtttatcatg
     3661 ggcttctcca ttgtcatatt tgagggggcg ctggttcagg caggcctgaa aggaaacggt
     3721 ccggatgaga aaaatttgtt tgttaagctg acgaatacca tcagcgtgct gctggcgatt
     3781 ttcgtcgtcc tgcgctttgg cgaactgatt tatcgcgaca agctgtccta tgcgtttgcc
     3841 ggcgattttt actccgctat gttctggatt gaagtcgtcc tgatggtctt cccgttagtg
     3901 gtgctgcgtg tggcgaaact gcgtaatgac tctcgtatgc tgtacctgtc ggcgctgagc
     3961 gcgctgttgg gttgcgcgac gtggcgtctg acctattcgc tggtggcatt caacccgggt
     4021 ggcggctacc actacttccc aacctgggaa gaattgttga tttctattgg ttttgtggct
     4081 attgagattt gtgcatacat cgtactcatt cgtctactgc cgatacttcc tcctttaaaa
     4141 caaaacgatc ataatcgtca tgaggcgagc aaagcatgag ccagagaatt actattgatc
     4201 cggtaacccg tattgagggt catttacgca ttgactgcga aattgagaac ggcgtcgtat
     4261 ccaaagcatg ggcgtccggc accatgtggc gcggtatgga agagatcgtg aagaaccgcg
     4321 atccgcgcga tgcgtggatg attgtgcaac gtatttgcgg cgtttgtacg acaactcacg
     4381 cgatctcctc cgttcgtgcg gcggaaagcg cgctgaatat tgatgttccc gtcaacgcgc
     4441 agtatatccg taatattatt ctggcggcgc ataccaccca tgaccacatt gtccatttct
     4501 accagctctc tgcgctggac tgggtggaca ttacctctgc gctgaaagcc gatccggaaa
     4561 aagcttctgc gatgctggat ggcgtgtcga gctggcacct gaacagcgcg caagagttca
     4621 cgaaagttca gaacaagatc aaggatcttg tcgctagcgg tcagttaggt attttcgcca
     4681 atggctactg ggggcacccg gcaatgcagt taccgccgga ggtcaacctg attgcggtcg
     4741 cccactatct gcaggcgctg gaatgtcagc gtgacgctaa ccgcgtggtg gcgttgctgg
     4801 gcggtaaatc gccgcatatc cagaacctgg cggtcggtgg ggtggcgaac ccgatcaatc
     4861 tcgacagcat cggtacgttg aaccttgaac gcctgatgta catcaaatcg tttatcgata
     4921 agctgagcga ttttgtcgag caggtgtata aagtggatac cgcagtcatc gcggcctact
     4981 atccggaatg gctggagcgc ggcaaaggcg cggtgaacta cctgagcgcg ccggaattcc
     5041 cgaccgacgg taaaaacggc agtttcctgt tcccgggcgg ttacattacc aatgccgatc
     5101 tgtcgacata ccgtccgatc acctctcact ccgatgaatt cctgattaaa ggtattcagg
     5161 agagcgcgaa gcacgcctgg tataaagatg aagcgccgca ggcgccgtgg gaaggcacca
     5221 cgattccggc ttacgacggt tggtcggatg acggtaaata ctcatgggtc aagtcgccga
     5281 cattctacgg caaaaccgtc gaagtcgggc cgctggcgaa catgctatgt aaactggccg
     5341 caggtcgtga atccacgcag accaagctca atgaaatcat tgcgctttat cagaagctga
     5401 ccggcaaaac gctggaaatg gcgcaacttc actctacgct gggtcgtatc atcgggcgta
     5461 ccgttcactg ttgtgaactg caaaacgtat tgcaggatca atacaacgcg ctgattgtaa
     5521 atatcggcaa aggcgattac accacgtttg tgaagccgaa cattcaggcg acgggcgagt
     5581 tcaaaggcgt gggcttcctg gaggcgccgc gcggtatgct gtctcactgg atggtgatta
     5641 aagacggtat tatcagtaac tatcaggcag tggtgccatc gacctggaac tcaggtccgc
     5701 gtaacttcaa cgatgacgtg gggccgtacg aacagtcgct ggtcggtacg ccgatcgccg
     5761 atccggcgaa gccgctggaa gtggtacgta ccatccactc cttcgaccct tgcatggcgt
     5821 gcgcggtgca cgtggtggac gccgatggca atgaagtggt ctcggtgaag gttttgtaat
     5881 gcggatatta gtcttagggg tcggcaatat tttgctgacc gatgaagcca tcggggtacg
     5941 tattgttgaa gcgttagagc aacgatacac cctgtcggat ttcgttgaga ttctggatgg
     6001 cggtacggcg ggaatggaac ttcttggcga tatggcgaat cgggatcatt tgatcattgc
     6061 cgacgccatc gtgtcgaaaa agaacgcgcc gggaaccatt atggtactgc gcgacgatga
     6121 agttccggcg ctgttcacca acaaaatctc cccccatcag cttggactgg ccgacgtatt
     6181 gtcggccctc cgctttaccg gcgagtttcc gaagaagttg accctggtcg gcgttattcc
     6241 acagtcgctg gaaccgcaca tcggcttaac gccaaccgtc gaggcgatga ttgaacctgc
     6301 gcttgagcag gttcttgctg cgctgcgtga atccggcgtc gaagcaattc ctaaggagac
     6361 ggcgcatgtc tgaaacgttt tccggattcg acacggcgcc cgtcgcccgg gttcaggcgg
     6421 cgtttgaaga gatagcccat cgttcgatgc acgatctttc gtttctgcat ccgactatgc
     6481 ctgtgcatgt ctctgatttt acgttgtttg aaggacaatg gacgggcacg gtaattacgc
     6541 cgtggatgtt aagcgcatta atcttccctg gcccggacca gatctggccc gggcgtaccg
     6601 tcggtgaaaa actcggtctg caactgcctt atggcacgat gacctttacc gttggcgaac
     6661 tggaaggcgt ttcacaatat cttgcctgct cgttgatgtc gccgctttcc cgtagcctgt
     6721 cgccggaaga gggcgtccgg ctggcggatg actgcgcgcg gatgctgtta tccctgccgg
     6781 taagcaatcc tgatgcgccg cagacaagcc ggcgtgcgtt gctgtttggc cgtcggagct
     6841 gtgagaatgc atgagctgtc tctttgccaa agcgccgttg aaattattca gcagcaggca
     6901 gaacagcacg gcgtggcgcg cgtcaccggc gtatggctgg agataggcgc gctttcgtgc
     6961 gttgaagagc gcgcggttcg tttcagcttt gacatcgcct gccaggggac tttagcgcaa
     7021 gggtgcgaat tgcacatcga ctacagaccg gcccaggcct ggtgctggga ttgcagtcag
     7081 gtggtggaaa ttctcaggca tgacgcgcaa tgtccgcatt gtcatggcga tcgcctgcgg
     7141 gtggataccg gcgattcgtt gaaagtaaaa agtattgagg tcgaataacc cgcattttat
     7201 ttcaggtggt taattatgtg tattggcgtc cccggtcagg tgctggccgt cggagatgat
     7261 attcaccagc ttgcgcaggt ggaagtgtgt ggcatcaaac gtgatgtcaa tattgctctg
     7321 atttgtgaag gtaagccagc cgatctgata gggcaatggg tattggtaca cgttggtttt
     7381 gcgatgagca tcattgacga agacgaagcg aaagccacgt tagatgcgct gcgccgcatg
     7441 gagtacgaca tcaccagcgc gtgatccctt aatcacctct attatatcgc tctataatcg
     7501 ttgtataatt atttatatat cgattgtggg gcgaaaccta tgaataaatt tttgcgccag
     7561 ctctctctgc tggcgttgct tttttgctgg ccgttaatgt cacaggcggc gcgtactttt
     7621 accgatcaac ttggccgcca ggtcacggtt cccgataccc tcgacagagt ggtggtgctc
     7681 cagcatcaaa cgctcaatct ccttgtacag atgaatgcca ctgacaaaat cgttggggtc
     7741 atggcgaact ggaaacagca attaggcgac ggctatgcgc gtctggcgcc ggaactggcg
     7801 caaaaagcct cgctgggcga tctaacgcac gttgatcctg aaaaactggt ggcgctgcgc
     7861 ccgcaggtgg tgtttgtcac gaattacgct ccgcaggaga tgatcgacaa gatcagccgt
     7921 cttggcattc cggtggtggc gatttcgctg cgccatgatg ttgctggcga gcaggctaaa
     7981 atgaacccga ccctggccga tgaagagcag gcttataatc gcgggctgcg tgaaggaata
     8041 acgctgattg gcgatatcgt caataaaccg caggaggcga aagcgctgat tgaggcgatg
     8101 aataaaggtc gcaagatggt cagcgaccgt ttgcagtcgg ttcctgaaaa tgagcgagtt
     8161 cgcgcctata tggcgaatcc ggagctgacc acctacggtt ccggtaaata caccggtctg
     8221 atgatggccc atgcgggggc gctgaatgta gcggcatcct cggcgaaagg ctttaagcag
     8281 gtgacaatgg agcaggtgat cgcctgggat ccacaagtaa tctttgtcca gaatcgctat
     8341 ccaaaggtcg tcaatgagat cctgcacaat ccccagtggc aggtcattga cgcggtgaag
     8401 catcatcggg tttacctgat gccggattat gccaaagcct ggggatatcc gatgccggag
     8461 gcggtgggaa tcggcgaact atggatggcg aaaaaactct atccggaaaa attccacgat
     8521 attgacatgc aaaaggccgc taacgactgg tatcaacgtt tttaccgtac tgactatcag
     8581 ggcgtacagt gatgcgaata ctggctgcgg ggagcttgcg cgtcgtctgg ccgcagctaa
     8641 tgacggcgtt tcaggcggat gcggtatgtg atttcggtcc ggcggggctg ttacgtgaac
     8701 gcatcgaagc gggcgaagca tgcgactttt ttgcttcggc gaacctggcg catccgcagg
     8761 cgctgctgga aagcgggcgg gcactgcggg tcgcgccttt tacgacgaac cgtttgtgtc
     8821 tgagcgtgcg ggcacaggcg atgcgtgaag gcgaggactg gctgtcgcta ttaacccggc
     8881 gggatctgcg gatcggcacc tcaacagcag gttgcgatcc ttccggcgat tatacgcagc
     8941 agcttttttc gcggatgggc aaggagggcg aagcgatccg aaaacgcgcg gtagcgctgg
     9001 ttggcggcag acagactttg ccgttaccgg cgggccggct ggcggcggaa tggctcatca
     9061 atcatgatta caccgatatc tttatcggct atgccagcta tgctcccagg ctacggcagg
     9121 ttaattcgct gcgagtggtt gatatcccgg aaccttataa tcccgtggct gaatatggct
     9181 ttgcctgcct gagcgagcag ggaaaaacgc ttgccgactt tttactgtca gcacgggcga
     9241 ggttgattct catgcaacat gggtttagtg aagcgccgca tatgacgcac tcgcagaact
     9301 gataagcgaa gcgtcagcag ggaataccat gccggatgac gacattacta cctcatccgg
     9361 cattatggtt taactttgac gtttatcttc ggtatggttt tcgaagtcgc tggcgtcatg
     9421 gcgttcatga agccgttcgt tcaatgggcc gttggtccgg ttgacaatgc gcccccgctt
     9481 taccgccgga cgttcggcta cctgtttcgc ccagcgttgt acgttttgat aacttccggc
     9541 atccagaaac tccgctgcat catagacatt ccccagcacc acgttgccga accacggcca
     9601 gatggccata tcggcaatag tgtactcttc tcccgcgaca tacgggtggt gagctaactg
     9661 cttatccagc acgtccagca gacgcttggc ttccatggtg aagcgattaa tggcgtactc
     9721 aatttttacc ggcgcataat gatagaagtg accgaaaccg ccgccgagga acggcgccgc
     9781 gccctgtagc cagaacaacc agttaagggt ttctgtgcgc ttagccagat cctgcggcag
     9841 gaaatggcca aacttatccg ccagataaac aagaattgcg cccgactcaa aaacccgaat
     9901 cggcgggttg tatgagttat cgcgcagcgc cggaattttt gagttcggat tgatgtcaac
     9961 aaagccgctg gagaactgat cgccctcgcc gatgcgaatc aaccaggcgt catattcggc
    10021 gccggtcacg cccagcgcca ggagttcttc cagcataatg gtcactttct ggccgttagg
    10081 cgtccccagc gaatagagct gtaacggatg tttgccgacg ggcagcgttt tgtcgtgcgt
    10141 cgggccggaa accgggcgat taatgttagc gaacgcgccg ctgccggatt tatcccacgt
    10201 ccagactttt gcgggttgat aagtattatc tgccatattg acctgccttc acagtggtgg
    10261 tgttgaagca gtgtagcagc ttgctaaccg gacatttaac cgattgggac attccgacga
    10321 gtgaaatttt aaccttctgg cctcagtgtg ccttattgag gtgtatgatt atgtcgacct
    10381 ctgtccggtt agtgtcacag agcagacaat cagagcgaaa tcacgccagg ctgctcaggc
    10441 ggtcttgttt tgaggtaagt gcatgagcaa aggaaccacc agtcaggatg cccccttcgg
    10501 gacattattg ggttacgccc ccggcggcgt agcgatctac tcttcagatt acaattccct
    10561 cgatccgtgg gacgacgacg acgcagcttt tcgtagctac atcgacgatg aatacatggg
    10621 gcataaatgg cagtgcgtgg aatttgcccg ccgttttctc tttctgaatt atggcgttgt
    10681 ttttactgac gtcggcatgg cctgggaaat tttctcgctg cgttttctgc gcgaggtcgt
    10741 gaatgacaat attttgcctt tgcaggcctt cccgaacggt tcgccgcgcg cgccggaggc
    10801 cggggcgttg ctcatctggc aaaagggcgg cgagtttaac gaaaccgggc acgtcgcgat
    10861 tatcacccaa ctcctggata acaaaattcg cattgctgag caaaacgtta tccacacgcc
    10921 attgccgcca gggcagcagt ggactcgcga actggaaatg gtcgtagaaa acgggtgtta
    10981 caccctgcgc gacacctttg atgacacgac gattttaggc tggatgatcc agaccgacga
    11041 cacgcaatac agtttgtcac agcctgacat cgcgaatcag tcgctggcga ttcgcggcgc
    11101 aaggctgcca gagaaaggtc agtttgacgg tcagtggctg gatgagcgcg atccgttaca
    11161 aaaagcctat gtacaggcga acggacacgt tatcaatcag gacccgtacc agtattttac
    11221 catcaccgag agcgccgaac aggagcttat caaagcgacc aatgagttgc atttgatgta
    11281 cctgcacgcc acggacaaag ttttaaaaga cgataatctg ctggcgctat tcgatatccc
    11341 caaaattctt tggccgcgcc tgcgtctctc ctggcagcgc cgtcgtcacc atatgatcac
    11401 cggtcgtatg gatttctgca tggatgaacg cgggctgaaa gtctatgaat acaatgccga
    11461 ttccgcatca tgccataccg aagcgggatt aattctcgaa aaatgggctg agcagggcta
    11521 taccggtaaa gggcataacc cggcggaggg cttaattaac gagctggcag gcgcctggaa
    11581 acacagtaaa gcgcgtcctt tcgtccatat catgcaggat gatgatatcg aggaggacta
    11641 tcacgcgcag tttatgcagc aggcgctgca tcaggccggt ttcgcgagca aaattctccg
    11701 cgggctgggc gagttgcgct gggatgacgc cgggcagttg atcgatggcg acggacggct
    11761 ggtgaattgt gtctggaaaa cctgggcgtg ggaaacggca atggagcaga tacgcgaagt
    11821 cagcgagacg gagtatgccg cagtgcctat tcgtaccggg cacccggaaa atgaagtccg
    11881 gctgattgat gtattactgc gcccggaagt gttggtgttt gaaccgctgt ggacggtgat
    11941 cccgggtaac aaagcgatcc tgcccatcct gtggtcgctc ttcccacatc atcgctattt
    12001 gctcgacacg gattttaccg ttaacgatga gctggtgcag accggctatg cggtaaaacc
    12061 gattgccgga cgttgcggta gtaatattga tttggtgagc catcaggaag aactcctgga
    12121 taaaaccagc ggcaagttcg ccacgcagaa aaatatctat cagcagttgt ggtgcctgcc
    12181 gaaggtcgcc gggaagtata ttcaggtctg tacgtttacc gtgggcggta actacggcgg
    12241 tacgtgcctg cgcggcgatg attcattagt cattaaaaaa gagagcgata ttgaaccgtt
    12301 aatcgtcatc aaagcgtaac ggggtcattc tcgtcgggat atcggcgttg gcgccgatat
    12361 cccgcctgtt gtgtttacca acgaacggct gtcagcttgc catttactgg taacatatga
    12421 gaaataatat cacaaattat tcttaacttt tctaacgcag gcggtgacgc tcgctgcgtt
    12481 ggcgcactcg tttcctgatt ttcgtctaat cggtactttt tgcggctggt tacgccgccc
    12541 ctatcccttt ggatttcggt catgcctgtt tggctggtaa acggacagca taatatattg
    12601 acgagttcaa atgacattat tagtcatata aaaagtttac gttaggttat ttttctatcg
    12661 caaaagtttg cgtttaaacc ctgtctgcaa tcttcggaac gagatataga tacacctaag
    12721 taaatgcagt taattattat tcaactatta ttgtcagcct tgtgaatgat attttcgtat
    12781 aaagtgaagc gacttccatt atgactatta atggtattat tgaatagttt actctgtaat
    12841 tatttaagtt tagtggacat tttgtcttat tctggtgaac gtatggttat ggcagatgac
    12901 agccgatttt tcattatgtt agcatgagtt gataatactt tatccaggca tagatcagga
    12961 tgtccacata taataaggag aatggtatat gtttaaaaaa gtattaggct tgcgccactg
    13021 gaataataat gttgtaaaaa taccgccgcc agcagaatct ggcgctaatg cgtctgacgt
    13081 ggtggtggat actcctgagc cttatgagcg gatactgtgt caaaaaattc tgatggggat
    13141 ctcgacgatc gatatcattc gtaatgccat cattaagtcc tgtgagcagc tcaatattga
    13201 aaaagaacgc attaatgaac ttaacgaaca gaatgataaa gccagaagtt cattaaaatc
    13261 gctcgtggaa tttatcaccg aaattggcac gacttcatca gatattggct gtcgtatggg
    13321 cgacttaaat acctccttaa cgcaaattaa tgcgtgtatt aaagagatac agaagatcgc
    13381 taaccagacc aatttgatag cgattaactc cgcgatcgag gccgcgcgcg taggggatgc
    13441 cgggcgtggt tttagcgtta tttcgaaaga agtgaaaaac ctgtccgaag atgttaaaca
    13501 cagttcgaaa agcgtcagta cgttaacctc tgtaatcaaa gataatacgg ccagagtgag
    13561 tgaggtgctg gataaccaac agccggttat tgataatatt acgactaaca taaatcaaat
    13621 tgtggagtct attggcatcg tcattgataa atcgctgagc atgaaatcgg tcatgcagta
    13681 catctctacg gtgcagtttt tgaatattgt caaagttgac catgttatct ggaaaatgga
    13741 agtctacaaa ttactcttaa ataaagacat aaacagtaaa ataacgatgc acgatcagtg
    13801 tcggctgggg aaatggtact acggttttga agggcagcag tttagcaatt actacagttt
    13861 ccgtagtctg gaagcgccgc ataaagaggt gcataccgct ggtcactctg cgctgaacta
    13921 ttttgccgca ggcgatatga atgcgatgtc gcaagaactc gacagaatgg agcgatccag
    13981 taatgaggtg gttaaccagc tggaaatgct ggctgtcgat ttgttaaaag aaaccacagt
    14041 gtgaagtcat gagttattac cgtataacca acaggagcca tcatcaacag gactgatgta
    14101 tcacactttc tgcactggag ttattccgga cagagaaaaa aagcatgacg cagaagatgg
    14161 ctgtgtttgt ttacccgaat cacttacctt agtaagtgat tcgggattaa tcagcaacct
    14221 ctttgctttt tatcggtggc cagactttgg ctggaaaagt gcgttactgc taaatttctc
    14281 actctcttac cgccttcctg cccctcgaaa tacctgaaac ctgtgctcac agattaatag
    14341 cgattattta atcgtgaaat aacgctgggc attattgaag cagatatcct gaaccatacg
    14401 gcttaacatc gcttcatcat caggaatctc tccgtcctgc gcccactgtc ccagcaggtt
    14461 acagagaata cgccggaaat attcatgtcg cgtataagaa aggaaactgc gggagtcggt
    14521 cagcatcccg acaaactgac ttaacagtcc catttgcgac agttgctcca gttggcgcag
    14581 catcccgtct ttctgatcgt taaaccacca gccggaacca aactgcactt ttccggcaat
    14641 tcccggcccc tggaagttac cgatcatggt cgccaggact tcgttatcac gtgggttcag
    14701 gcaatagagg atagtcttgg gcagttcatt ggtcacatcc atactgtcga gcaaacggga
    14761 gagcgcccag ctaatgttat tatcgccaat agagtcaaag ccggtatccg gcccgagcag
    14821 gcggaacata cgggtattat tgttacggat cgcgccaata tgtagctgca tcacccagcc
    14881 gcgcgcggcg tactgacggc ccagccagac cagcaccgcc gtggtaaact gggcgatctc
    14941 aagttcgctc aacgtttcgc
//
LOCUS       DAGWFR010000095        14912 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.097, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000095 DAGWFR010000000
VERSION     DAGWFR010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 14912)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14912)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14912
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.097"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..327
                     /locus_tag="MOX77_002923"
     CDS             <1..327
                     /locus_tag="MOX77_002923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UxaA family hydrolase"
                     /protein_id="HCA3358393.1"
                     /translation="PASDFVCGTQQVASGITVQVFTTGRGTPYGLMAVPVIKMATRTE
                     LANRWYDLMDINAGTIATGEETIEDVGWKLFHFILDVASGRKKTFSDQWGLHNQLAVF
                     NPAPVT"
     gene            complement(567..1514)
                     /locus_tag="MOX77_002924"
     CDS             complement(567..1514)
                     /locus_tag="MOX77_002924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HCA3358394.1"
                     /translation="MNITIATLSELLVEFLAKKENQGFSSPGEFWGPYPSGAPAIFAD
                     QVAKLGFRSLLFSCVGNDAFGVMNITRLSRDGVNVQGISVLPNATTGSAFVSYRSQAQ
                     RDFIFNMPDSACGLLSADHLDETLLRQYRHFHIMGSSLFSFRLIDAVRKAISIVKENG
                     GTISFDPNIRKEMLKIREMSQAFEYILDYTDFFLPSDGELDYFGLSKSRDEEKIVARL
                     HKRGIAHVIIKRGARGASYYSKDEQHHVAGYPVKVVDPTGAGDCFGATFVSLFLAGYS
                     VPDALAHANAAGSLAISARGPMEGTSTLAQIKELMRQQN"
     gene            complement(1525..2358)
                     /locus_tag="MOX77_002925"
     CDS             complement(1525..2358)
                     /locus_tag="MOX77_002925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HCA3358395.1"
                     /translation="MAKPSTSLLKRRLDIAEIVRKNGEIKVDDLAEMLSVSGVTIRND
                     LNYLEQQGYLKRSFGGAIYTAQPVRAAVSHEVVQSQALEHSVELELAKQVARLVCDDD
                     TVFLGAGEVLRKALPFLGDYRDLCLIINDLSHVAPARDYIDGEIVLLGGVLGRSGQAL
                     GGEIAIQSLQQFQPSCCLVMVDHISEDGTLNVKNESAAALLSECLRLSGQSIAVVAQR
                     PIHDIARYPVGKLNTLSAIITPQIVAAEYHSRFLADGLTNSYTNNECLTWINPTLHQA
                     R"
     gene            2692..3546
                     /locus_tag="MOX77_002926"
     CDS             2692..3546
                     /locus_tag="MOX77_002926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose bisphosphate family class II aldolase"
                     /protein_id="HCA3358396.1"
                     /translation="MFIISSKNMLQKAQHAGYAVPAFNIHNLETLQVVVETAAEMRSP
                     LIVAGTPGTFSYAGMGNIVAIAGDLAREYNLPLAIHLDHHESLADIESKVMAGIRSVM
                     IDGSHFPFEENVALVKSVVDFCHRYDTSVEAELGRLGGIEDDLVVDSKDALYTNPQQA
                     REFVARTGIDSLAVAIGTAHGMYAAEPKLDFERLAEIRALVDIPLVLHGASGLPESDI
                     RQAISLGVCKVNVATELKIAFSDALKEYFLQNPKANDPRHYMQPAKQAMKEVVRKVIH
                     VCGCEGQL"
     gene            3557..4471
                     /gene="pfkB"
                     /locus_tag="MOX77_002927"
     CDS             3557..4471
                     /gene="pfkB"
                     /locus_tag="MOX77_002927"
                     /EC_number="2.7.1.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-phosphofructokinase"
                     /protein_id="HCA3358397.1"
                     /translation="MIYTLTLNSAIDMNIFSDPLQPNIVNRTHHTEFCPNGKGVNVAL
                     VLDHFQIPAHILGIFGGFTGHYIVESLRTRKMPVTPAWVEEPTRINIFIHDGKQEYKL
                     VNPGSYIPDECKKQIITIISQLPDAEYLVISGSLPQGIESRFYAEIMHICQQKNIGVI
                     LDISHPSLRQLLEFKPLLIKPNDEEVKAIFGLTVSDDNDAKNTLTTLHALGAQNVLLT
                     LGAKGMYFSNGIDYWFCSAPTVDLVSSACAGDAALAAFLSQWLSTGEVEYALSLASAT
                     GADVASSAGLGQLAAIETLLSQIHVRKL"
     gene            4498..5925
                     /locus_tag="MOX77_002928"
     CDS             4498..5925
                     /locus_tag="MOX77_002928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
                     /protein_id="HCA3358398.1"
                     /translation="MKKIIAVTGCPTGIAHTFMAEEALKNAAKKLSVEIKVETNGASG
                     VENAIQPADLVDIAGVIIAADKDVLPDRFNGLPVIEVPVKEAIHHPAELINKVINGEA
                     PIRKGESTTSTEIIEKESLGRQIYKHLMSGVSNMLPFVVAGGILIAVSLLWGIYSADP
                     NSAEYNATAAMLMKIGQQAFSIMVPVFTAYIAFSISGRPGMVAGFVGGLLANTTGAGF
                     LGGIIAGFAAGYLMLWVKNRLEGLPRQYEGLKSIFIMPLIGVLVIGVLMSLLGQPVAA
                     INNSMMNWLASLQEANPILLGIVVGAMCSFDFGGPVNKAAYVTGTLLLGQGNFYFMAG
                     VSAACITPPLVIALATTFFPKGFSEEERAAGMVNYILGCTHITEGAIPFAAKDPLRVI
                     PMMMIASSISAVLSYSLRIQVPAPHGGFLILPLVSQPLAWVLCILAGSACGAMMLGLW
                     RLWAVRKNSVNTTPVAKAGGQNAAL"
     gene            5912..6718
                     /locus_tag="MOX77_002929"
     CDS             5912..6718
                     /locus_tag="MOX77_002929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HCA3358399.1"
                     /translation="MQLCEHDIFISDERLDKVTALHRVVEKLSAAGNTTPDYLRGMLD
                     REAQISTYLGNGIAIPHGTPESRDAVLQTGVKVIVFRHGVDWGDGNTAYLVTGIAARS
                     NEHLEILRQLTRVLSDDAILQALAKAESPSQVLALLTGSTTNTPAAMELHEGEQATFV
                     IHNPHGLHARPSAVLVKFIKQFQSHITVENLDNASGPVDGKNLMRVVSLGAKKGHRLL
                     FRAQGEDAQQALREIGELIASGAGEMITVPVTPPPEVMQPKRSWLSRLFN"
     gene            6916..8187
                     /gene="gatZ"
                     /locus_tag="MOX77_002930"
                     /pseudo
     CDS             6916..8187
                     /gene="gatZ"
                     /locus_tag="MOX77_002930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462170.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose-bisphosphate aldolase subunit GatZ"
     gene            8202..8666
                     /gene="gatA"
                     /locus_tag="MOX77_002931"
     CDS             8202..8666
                     /gene="gatA"
                     /locus_tag="MOX77_002931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS galactitol transporter subunit IIA"
                     /protein_id="HCA3358400.1"
                     /translation="MSQLFVRTGITFDSSQQALAHIGKEMLAKGVVHDSYPQALVERE
                     ASFPTGIALERHAVAIPHCEAVHAKSPAIYLIRPDKPVMFQQADDDEEIAVSLIIALI
                     VENPAAQLKLLRRLFGALQIPDTIEALLSAPDAELASCFEHKVLTAEQCVQV"
     gene            8697..8981
                     /gene="gatB"
                     /locus_tag="MOX77_002932"
     CDS             8697..8981
                     /gene="gatB"
                     /locus_tag="MOX77_002932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS galactitol transporter subunit IIB"
                     /protein_id="HCA3358401.1"
                     /translation="MKRKVIVACGGAVATSTMAAEEIKELCDANHIELDLVQCRVTEI
                     ETYMDGADLICTTARVDRAFGDIPVVHGMPFVSGVGIEALQQKILSILMG"
     gene            8985..10358
                     /locus_tag="MOX77_002933"
     CDS             8985..10358
                     /locus_tag="MOX77_002933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS galactitol transporter subunit IIC"
                     /protein_id="HCA3358402.1"
                     /translation="MFSEIMRYILDLGPTVMLPLVIIVFSKLLGMKLGDCFKSGLHIG
                     IGFVGIGLVIGLMLDSIGPAAKAMAEHFQINLHVIDVGWPGSSPMTWASQIALVAIPV
                     AIGVNVLMLVTRMTRVVNVDIWNIWHMTFTGAMLHLATGSYWLGILGVVVHAAFVYKL
                     GDWFAKDTRDYFGLEGIAIPHGSSAYLSPVAVLVDTIIEKIPGLNRIHFSADDVQKRF
                     GPFGEPVTVGFVMGLVIGVLAGYDTKAVLQLAVKTAAVMLLMPRVIKPIMDGLTPIAK
                     HARKRLQAKFGGQEFLIGLDPALLLGHTSVVSASLIFIPLTILIAVLVPGNQVLPFGD
                     LATIGFFIAMAVAVHQGNLFRTLISGVIIMGITLWIATQTIGLHTQLAANAGALKAGA
                     QVASLDQGGSPITWLLIQLFTWQNIVGFAVIAIIYLAGVLLTWRRARQFVAAEKATAL
                     QQSQIAS"
     gene            10402..11445
                     /gene="gatD"
                     /locus_tag="MOX77_002934"
     CDS             10402..11445
                     /gene="gatD"
                     /locus_tag="MOX77_002934"
                     /EC_number="1.1.1.251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactitol-1-phosphate 5-dehydrogenase"
                     /protein_id="HCA3358403.1"
                     /translation="MKSVVIHAEGDVRVEERPLPQLQAEDDVLVKVVSSGLCGSDIPR
                     IFAQGAHYYPITLGHEFSGYVESYGTGVTDMQPGDAVACVPLLPCFHCPQCERGYFSL
                     CKQYQFVGSRSEGGNAEYVVVKRANLFRLPSDMPIEDGAFIEPITVGLHAFHLAQGCE
                     GKNVIIVGAGTIGLLALQCARELGARSVTAIDINPQKLELAKALGATHTCNSREMTAD
                     DIQTALSDIQFDQLVLETAGTPQTVSLAIDITGPRAQLALVGTLHHDLTLTTRTFGLI
                     LRKELTLLGSWMNYSAPWPGEEWETAARLLAEKRLQLTPLIAHRGDAESFAEAVKALN
                     GAPMQGKILLQLS"
     gene            11556..12329
                     /locus_tag="MOX77_002935"
     CDS             11556..12329
                     /locus_tag="MOX77_002935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HCA3358404.1"
                     /translation="MNSFERRNKIVDLINTQGSVLVMDLSNTFGISEVTIRADLRLLE
                     EKGLVTRFHGGAAKPGSHLAEGDNQEVILEDRYQLASDPKKRIAQAAAAMVEEGMTII
                     LDSGSTTLLIAEALARKSNITVITNSLPAAFTLSENKDLTLVVCGGTVRHKTHSMHGT
                     IAERSLHGISADVMFVGADGIDATNGITTFNEGYSISGVMAAAAHKVIAVLDATKFNR
                     RGFNQVLPMDKIDCVITDDTISKQDKAALAKTGVELMIV"
     gene            complement(12487..13350)
                     /gene="rsmI"
                     /locus_tag="MOX77_002936"
     CDS             complement(12487..13350)
                     /gene="rsmI"
                     /locus_tag="MOX77_002936"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HCA3358405.1"
                     /translation="MKQNESADNSQGQLFIVPTPIGNLADITQRALEVLQAVDLIAAE
                     DTRHTGLLLQHFGINARLFALHDHNEQQKAETLVAKLKEGQNIALVSDAGTPLINDPG
                     YHLVRTCREAGIRVVPLPGPCAAITALSAAGLPSDRFCYEGFLPAKSKGRRDALKAIE
                     AEPRTLIFYESTHRLLDSLEDMVAVWGESRYVVLARELTKTWETIHGAPVGELLAWVK
                     EDENRRKGEMVLIVEGHKAQEDDLPADALRTLALLQAELPLKKAAALAAEIHGVKKNA
                     LYKYALAQQEE"
     gene            13414..>14912
                     /locus_tag="MOX77_002937"
     CDS             13414..>14912
                     /locus_tag="MOX77_002937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator"
                     /protein_id="HCA3358406.1"
                     /translation="MVPSTFSRLNAARALPVVLAALLFAGCGTQAPDQSAAYMQGSAQ
                     ADSAFYLHQMQQSADDSKTNWQLLAIHALLKEGKSQQAVELFNQPPQNLNDTQRREQS
                     LLAVEIKLAQKDVAGAQALLDKLKPADFAPHQQARYWQAQIVASQGRPSLTLLRALIA
                     QEPLLAAKEKQKNIDATWQALSAMTPDQARTLVINADENVLQGWLDLQRVWFDNRNDP
                     DMLKAGIADWQKRYPQNPGAKMLPTQLVNVQRFKPASTSKIALLLPLNGQAAVFGRTI
                     QQGFEAAKNLGTQAVEMQPVAAPDAPVEPSVEETQPQMTNGVASPSQASVRDLTDDAP
                     SQSATPVSAPQTPPAQPATASAPADPSAELKIYDTSSQPLDQVLAQVQQDGASIVVGP
                     LLKNNVEALMKSNTPLNVLALNQPETVRSFPNICYFALSPEDEARDAAHHIYEQGKQS
                     PLLLIPRSALGDRVANAFTQEWQKLGGGIVLQQKFGSVAELKMGVNGGAG"
BASE COUNT         3669 a         3842 c         3755 g         3646 t
ORIGIN      
        1 cccgccagcg atttcgtctg cggcacgcag caggtcgctt ccggcattac cgtacaggtc
       61 tttaccaccg gacgcggcac gccgtacggg ctgatggcgg tgccggtcat taaaatggcg
      121 acgcgtaccg agctggcgaa ccgctggtat gacttaatgg atatcaatgc aggcaccatc
      181 gccacgggtg aagagacaat cgaagatgtg ggctggaagc tatttcactt tattctcgat
      241 gtcgccagcg gccggaaaaa gactttctca gatcaatggg gattgcataa ccagctggca
      301 gtgtttaacc ccgcacctgt gacctgatct attctggaaa gcgcctcgca aaacatggct
      361 taagggccat gttttcatat gtttgataaa ctgcgccatg ttcataccgg atatggcaaa
      421 aacacctaac ccaccataaa accattcaaa ttcaataaat tgaaattcta tgccaggcgc
      481 aaccttacgt ttctcactaa tttgagtcgc agcacatgca atttgaggta tgtcgaatat
      541 aacgacagcc tattaatcac ctttacttaa ttctgctgcc tcatcaattc tttaatttgt
      601 gccagcgtgg acgtgccttc catcggccca cgcgcagaga tagccagcga tcctgcggca
      661 ttagcatggg ctaaagcatc gggtacggaa tatcccgcaa gaaacaggct gacaaaggtt
      721 gcgccaaagc aatcgccagc gcctgtagga tcaaccacct tcaccggata cccagccaca
      781 tgatgttgtt cgtcttttga atagtaactg gctccacggg cgccacgttt aatgatgaca
      841 tgggcaattc cacgcttgtg aagccttgcg acaattttct cttcatcgcg ggatttgctc
      901 aggccgaaat aatccagttc gccatcgctt ggcaggaaga aatccgtgta atcaagaata
      961 tattcaaagg cctgcgacat ttcgcggatc tttagcatct ctttacggat attaggatcg
     1021 aaagaaattg tgccaccatt ttcttttaca atgctaatcg ccttgcgtac ggcatcgatc
     1081 aaacgaaagg aaaataatga cgatcccata atatgaaagt ggcgatattg cctgagtaat
     1141 gtttcatcaa ggtggtcggc actcagcaaa ccgcacgcac tgtccggcat gttgaaaata
     1201 aaatctcgct gggcctggct tcggtagctg acaaaagcac tacctgttgt ggcgttcggc
     1261 agtacggaaa ttccctgtac atttacgcca tcgcgcgaca atcgggtaat attcataacg
     1321 ccaaaggcat cgttgccaac acagctaaac aacaatgaac gaaaaccaag tttagcaacc
     1381 tgatcggcaa atatggcagg cgccccactg ggatacggcc cccaaaattc ccccggtgag
     1441 gaaaatccct ggttctcttt ttttgccaga aactcgacga gcaattcact caatgttgcg
     1501 attgttatgt tcatgcgttg tccttcatct tgcctgatgc agggtcgggt ttatccaggt
     1561 cagacattcg ttattggtat agctgttggt taagccgtcg gccagaaacc gtgagtggta
     1621 ctcagcggcg acaatctgtg gcgtaataat cgcgctcagc gtattcagtt ttcctaccgg
     1681 ataacgcgct atatcatgaa tcggacgctg cgccaccacg gcaatactct gtccactaag
     1741 gcgcaggcat tcacttagca aagcagctgc actttcgttt ttcacgttga gcgtgccatc
     1801 ctcgctgata tggtccacca tcaccagaca acatgacggt tgaaattgtt gcaaagattg
     1861 gatggcgatt tcgcccccca gcgcctgacc actgcgcccc agtacaccgc ccaacaacac
     1921 aatttcacca tcgatataat cacgggccgg tgcaacatgg ctaagatcgt tgatgataag
     1981 gcacagatcc cgataatcgc ccaggaaagg aagcgcttta cgcaacacct ctccggcccc
     2041 cagaaacacg gtatcgtcgt cgcagaccag acgggcaact tgcttagcca gttcaagctc
     2101 gacgctatgc tctaacgcct gcgactgcac cacttcatgg cttaccgctg ctctgacggg
     2161 ttgggccgtg taaatcgctc cgccaaagga gcgtttcaga tagccttgct gctccaggta
     2221 attgagatca ttacggatcg ttacccctga aaccgataac atttcagcca aatcgtctac
     2281 ttttatttcg ccgtttttac ggacgatttc ggcaatgtcc agacgccttt tcaacaggct
     2341 ggtagatggt tttgccacaa catacccttt ttttccgctt cgtcgggaag ttatcccgtg
     2401 ctttaacttt catttttaaa cttctgacag gggatgtcaa ttttgcacca cgtcaccgaa
     2461 tgctcaatgg gaaacatcac aataaaatca atcacttata gaattttcac atcccctatt
     2521 tacttacaaa acaaaattta aatccacata tttgctttca tttaagaaaa attatcctgc
     2581 ttttgtgttg atgatcacaa tcatgtgtgg caatgatcgt tacattactt tcaaaacgaa
     2641 ggttattttt attttgtact ttaatttcga aagttataaa cggagaccac tatgttcatt
     2701 atttccagta aaaatatgct ccagaaggcc cagcatgcag gctatgccgt gccagccttt
     2761 aacatccata acctagaaac cttgcaggtg gtggtagaaa ccgccgcaga aatgcgctca
     2821 ccgctgatcg ttgccggaac accaggcacg tttagctatg ccggaatggg taacattgtg
     2881 gcgatcgcgg gcgatctggc tcgtgaatac aatctgccac tggccattca tctggatcat
     2941 catgaatcgt tagccgatat tgaaagcaaa gttatggcag ggatccgttc agtcatgatc
     3001 gatggttccc actttccctt tgaagagaat gtggcgctgg tgaaaagcgt ggtcgatttt
     3061 tgccatcgct acgacaccag cgtggaggca gaactgggcc gccttggtgg gatcgaagat
     3121 gatttagtgg tagacagcaa agatgccctt tacaccaatc cacagcaagc acgtgagttt
     3181 gtggcgcgca ccggcattga ttcgctggcg gttgctatcg gcacggcaca cggtatgtat
     3241 gccgctgaac ctaaacttga ttttgagcga ctggcagaaa tacgcgctct ggtggatatc
     3301 cctctggtat tgcatggggc atctggtttg ccggaaagcg atattcgcca ggccatcagc
     3361 cttggggtat gcaaagtcaa tgtcgccacc gaactgaaaa tcgccttctc cgacgcctta
     3421 aaagagtatt tcctacaaaa cccgaaagcc aatgatcccc gccactatat gcaaccagca
     3481 aaacaggcga tgaaagaggt ggtacgcaaa gtaattcatg tttgcggctg tgaagggcaa
     3541 ctgtgaggaa tcgcctgtga tctacacgct aacacttaat agcgcgattg atatgaatat
     3601 atttagcgat cctttacagc caaatattgt caatcgcact caccacaccg agttttgccc
     3661 aaatggtaaa ggggtaaatg ttgcgctggt tctggatcac tttcaaatac ctgcgcatat
     3721 attaggcatt tttggtggtt tcaccgggca ttatattgta gaaagcctgc gtacccgaaa
     3781 aatgccagtc acaccagcat gggtagaaga acccacgcgg attaatattt tcattcatga
     3841 cggcaagcag gaatataaac tggtcaaccc tggctcatat attccagatg aatgtaaaaa
     3901 acaaattatc acgattattt cgcaactgcc cgatgcagaa tatctggtga taagcggcag
     3961 cctgccacaa ggtattgaaa gtcgctttta cgcagaaatt atgcatattt gtcagcaaaa
     4021 aaatatcggc gtaattttag atattagtca tccgtcatta cgtcagttac tggagttcaa
     4081 accgttatta attaaaccaa atgatgaaga ggttaaagca atattcggtt taactgtctc
     4141 tgacgacaat gatgcgaaaa atactctaac cactttacat gcacttggtg cacaaaatgt
     4201 tctgctaacc cttggcgcta aaggaatgta tttctccaat gggattgatt actggttttg
     4261 tagcgcgcca acggttgatt tggtgagctc cgcctgtgca ggcgatgctg cactggccgc
     4321 ctttctcagc cagtggttat ctacaggaga agtggaatat gccttatctc ttgccagtgc
     4381 aacaggagct gatgtcgcaa gttctgccgg actaggccaa cttgcggcaa tagaaacctt
     4441 actttcgcaa atccacgtca gaaagctgta ggttaaatta caatataagt tctgcttatg
     4501 aaaaagatca ttgcagtgac cggctgccct accggtattg cgcatacatt tatggctgaa
     4561 gaagccttaa aaaatgccgc gaaaaaatta tctgttgaaa taaaagttga aaccaatggt
     4621 gccagcggtg ttgaaaatgc cattcaacct gctgatctgg tagatattgc cggagtcatt
     4681 attgcggcgg ataaagatgt cttacctgat cgctttaatg gtttaccggt tattgaagta
     4741 ccggtaaaag aagcaatcca tcatcctgcg gagctgatta acaaagttat taatggtgaa
     4801 gccccaatac gtaaaggcga atcaaccacc agcacggaaa ttatcgaaaa agaatcactg
     4861 gggcgacaaa tttataagca cctgatgagt ggtgtttcaa atatgctacc ttttgtagtt
     4921 gccggaggca tattaattgc ggtgtcgctt ttatggggga tttattccgc tgatcctaat
     4981 tcagctgaat acaatgcaac cgccgcaatg ctaatgaaaa tcggtcagca agccttttcg
     5041 attatggttc cggtctttac cgcttatatt gcattctcta tttctggcag accagggatg
     5101 gtggctgggt ttgtcggcgg cttactggca aatactaccg gagcaggatt tctcggtggg
     5161 ataattgccg gattcgccgc cggttacctg atgttatggg taaagaatcg actcgaaggc
     5221 ttaccgcgtc agtatgaagg cctgaaatcg atttttatta tgccgctcat tggcgtactg
     5281 gttattggcg tgttgatgtc gctgcttggg caacctgtcg cagctatcaa taatagcatg
     5341 atgaactggc tggcatcgct acaggaagcg aatccaatat tgctgggtat tgtggtgggt
     5401 gcaatgtgct cttttgactt tggcggcccg gtaaacaaag ccgcttatgt caccggcacg
     5461 cttttactgg gccagggcaa cttctacttt atggctggtg tgtctgccgc atgtattact
     5521 ccaccactgg taattgctct ggcgaccacc ttctttccaa aaggttttag cgaggaagaa
     5581 cgtgccgcag gcatggttaa ctatatcctc ggttgtacac acatcactga aggcgcgatt
     5641 cctttcgcag cgaaagatcc tttgcgtgtc atcccgatga tgatgattgc ttccagcatt
     5701 tccgcagtac ttagctacag cttgcgtatt caggttccgg ctcctcacgg cggcttctta
     5761 attttacctt tggtgagtca gccgctggcc tgggtgttat gtatccttgc gggatctgca
     5821 tgtggtgcga tgatgcttgg cctatggaga ttgtgggctg tgcgcaaaaa ttcagtcaac
     5881 acaactcctg tagcaaaggc tggaggtcag aatgcagctc tgtgaacacg atatttttat
     5941 cagcgatgag cgcctcgata aagtcaccgc tctgcaccgc gtggtggaaa agttatctgc
     6001 ggctggcaat accacgcctg actatttacg cggcatgttg gatcgcgaag cacagatttc
     6061 cacttatctg ggaaatggaa tcgcgatccc acacggtacg ccagaatctc gcgatgcggt
     6121 attacaaacc ggtgtaaagg taatcgtttt tcgccacggc gttgactggg gtgacggcaa
     6181 taccgcgtat ctggtcaccg gaattgccgc gcgctccaat gaacatcttg agattttgcg
     6241 ccaactgact cgcgtgctca gcgatgacgc tattctgcaa gcactggcta aagccgaatc
     6301 ccccagtcag gttttagcgc tactgactgg ctcgacgacc aatacgccag cagccatgga
     6361 gttgcacgag ggtgagcagg caacatttgt catccataat ccgcatggtt tacatgccag
     6421 acccagtgcg gtactggtga agtttatcaa acagtttcaa agccacatta cggtagaaaa
     6481 tctggataac gcctccggcc cggtggacgg aaaaaacctg atgcgagtgg tgtcgctcgg
     6541 cgcgaaaaag gggcatcgct tgttgttccg ggcgcagggc gaagatgcac agcaggcact
     6601 acgtgaaatc ggggagctta tcgcctctgg tgcaggcgag atgatcaccg ttcccgttac
     6661 cccaccacca gaagtcatgc agccaaagcg cagttggcta tctcgattgt ttaattagcc
     6721 ttcatttgtt cctccgtgcc cgctccggcg ggtacggttt ttcatgacaa agtgaagtta
     6781 cagacattac acaccatttc gttaccttac attttctttc gcaactttca tttatcagat
     6841 caaaatcaca aaacaacatt acgaaagcct ataaattctt tcgaagaata aaaacgaaag
     6901 aactcggaga taaaagtgaa agaaataatt gctcgtcata aagcaggaga acatctgggc
     6961 atctgttcag tttgttctgc tcatcccctg gttatcgaat cagctctgct tttcgatctc
     7021 aatactgaca acaaggtatt gattgaagcc acatccaatc aggtgaatca gtttggcggt
     7081 tataccggaa tgaaaccggc tgattttcgt gattttattt atggcattgc tcaggaagtg
     7141 ggatttccac gtgagcggtt gattcttggt ggcgatcatt tagggcctaa ctgctggcag
     7201 aacgaaccgg cagcggcggc aatggaaaag tcggttgagt taataaaagc gtatgtcgcc
     7261 gctggtttta gcaaaattca cctggacgcg tcgatgtcct gcgctgacga cccgacaccg
     7321 ttggatccga tggtcgttgc acgccgtgcc gccgtgcttt gtaaagcagc agaagagacc
     7381 gcaaacgaag aacaaaaatg ccatctgact tatgtcatcg gcacggaagt gcccgttcct
     7441 ggcggtgaag ccagtaccat cggcagcgtt catgtcaccc gcgaggtcga tgctgcccgt
     7501 acgctggaaa ctcaccaaat cgcgtttcgt gaatcaggtc tggaagaagc actgtcacgc
     7561 gtgatcgcca ttgtggtgca accgggcgtt gaatttgatc atacccagat tattcattat
     7621 cagccgcagg cggcacaggc gctctccgca tggatcaaag aaacgccgat ggtctatgaa
     7681 gcgcattcga ctgattacca aactcgccag gcctaccgcg ccctcgttcg cgatcattac
     7741 gccattctga aggtcggccc tgcactcact ttcgccctgc gcgaagccat tttcgcactt
     7801 gcgcaaatgg aaaacgagct gatctccccg gaacaacgta gccgcgtgat ggaagttatc
     7861 gatgaagtga tgctaaacga gccaggctac tggaaaaagt actaccgccc cacctagagc
     7921 caggcgatgg tcgacatcca ctttagtttg tctgaccgta ttcgctatta ctggccgcac
     7981 ccgcgtattc gtcaaagcgt agagaagtta atcgccaatc tgaataacgt cacattgccg
     8041 ctgggattaa ttagccagtt tatgcccgta cagtttgaac gcctgtctga gggcgtgctc
     8101 acccccacgc cgcataacct gattattgac aaaattcagg atgttctgcg cgcttatcgc
     8161 ttcggttgca cgccggatgt cgcctgaata gtggagaatt tatgagccaa ttatttgtcc
     8221 gaaccggaat cacattcgac tcgagccaac aggcgctggc gcacattggc aaagagatgc
     8281 tggcgaaagg cgtggtacat gatagttatc cgcaggcact ggtggaacgt gaagcgtcct
     8341 ttcccaccgg cattgcgctg gagcgccacg ccgtcgctat ccctcattgc gaggcagttc
     8401 atgcgaaatc acccgctatc tatctgattc gtccagataa gccggtcatg tttcaacagg
     8461 cggatgatga cgaagagatt gccgtttcgt taatcatcgc cttaatcgtt gaaaacccgg
     8521 cggcacagct aaaacttctg cgccgtctgt tcggggcatt acaaatcccg gacaccatag
     8581 aagccttact gagcgccccg gatgccgaac tggcgtcgtg ctttgagcac aaagtcctta
     8641 cggctgagca gtgcgtccag gtttaataat aaattgataa taatgaggaa taccctatga
     8701 aacgtaaagt aattgtggcc tgtggcggtg cggttgcaac ctcaacgatg gctgcggaag
     8761 aaattaaaga gctatgtgat gccaaccata ttgagctcga cttagtgcaa tgccgggtca
     8821 ccgaaatcga aacctatatg gacggcgccg atcttatctg taccactgcc agggtcgatc
     8881 gcgcctttgg cgatattccc gtcgttcacg gtatgccttt tgtttccggc gtgggtattg
     8941 aagcattaca gcaaaaaatt ctgtccattc tcatggggta acgtatgttt agcgaaataa
     9001 tgcgttatat cctcgactta ggcccaacgg tgatgttgcc tctggtgatc atcgtgttct
     9061 ctaaactgct gggaatgaag cttggggatt gttttaaatc gggtttgcat attggtatcg
     9121 gcttcgtggg tattggtctg gtcatcggcc tgatgctgga ttctatcggc cccgcggcga
     9181 aagccatggc ggaacatttc caaatcaatc tccacgttat tgacgtcggc tggccgggtt
     9241 catcgcccat gacttgggcg tcacaaatcg cgctggtcgc gatccctgtc gccatcgggg
     9301 ttaacgtcct gatgctggtg acccgcatga cccgcgtggt gaatgtcgat atctggaata
     9361 tctggcacat gaccttcacg ggcgccatgc tgcatctggc gaccggttca tactggctgg
     9421 ggattctggg cgttgtggtt catgccgcct ttgtctacaa actgggggac tggtttgcca
     9481 aagatacccg cgactatttt ggcctcgagg ggattgctat cccacacggc tcatccgcgt
     9541 acctgagccc cgtggcggtg ctcgttgata ccattatcga gaaaattccg ggtctcaatc
     9601 gtattcactt tagcgcagac gatgtccaga aacgcttcgg accgtttggc gagccggtga
     9661 ctgtcggctt cgtgatgggg ctggtgattg gtgtactggc aggctacgac accaaagccg
     9721 ttctgcaact ggcagtcaaa accgcagcgg tgatgctgct tatgccacgc gtcattaaac
     9781 ctattatgga tggcctaacg cctatcgcca aacatgcgcg taaacgtcta caggccaaat
     9841 ttggcgggca ggagttcctg ataggccttg atccagcgct actgctcggt catacctctg
     9901 ttgtctccgc gagcctgata ttcattccgc tgaccatcct gattgccgtc ttagtaccgg
     9961 ggaaccaggt gctgccgttc ggcgacctcg ccaccatcgg tttctttatt gcgatggcgg
    10021 ttgcggtaca ccagggcaac ctgttccgca cgctgatttc aggtgtcatt attatgggta
    10081 tcaccctgtg gatagccacg cagacgattg gcctgcatac ccaactggct gccaatgccg
    10141 gagcgctaaa agctggcgca caagtcgcct cgctggatca gggcggttct cccatcacct
    10201 ggctgctgat tcaacttttt acctggcaga atatcgtcgg cttcgccgtc attgccatta
    10261 tctatctggc cggcgtactg ctgacctggc gtcgcgcccg acagtttgtc gcggctgaga
    10321 aagccacggc gctacagcaa agtcaaatcg cctcttaatt ttaggggagc aatcgctccc
    10381 ctcaccttcc tggagaatgt tatgaaatca gtggttattc acgctgaggg agacgtgcgc
    10441 gttgaagaac gtcccttacc acaactgcaa gccgaggacg atgtgttggt caaagtcgtt
    10501 agctcagggc tttgcgggtc ggatatcccg cgtattttcg cgcagggcgc ccattattat
    10561 cctattacgt taggccatga attcagcggc tacgttgaat cctacggcac aggcgtaacg
    10621 gatatgcagc ctggcgatgc cgtcgcttgt gtcccgcttc ttccctgctt tcactgtccg
    10681 caatgcgaac gcggttactt ttctttatgc aaacagtatc agtttgtagg atcgcgcagc
    10741 gaaggcggta atgcggaata tgtggtggtc aaacgggcca atcttttccg cttgccgtct
    10801 gatatgccga ttgaagatgg cgcgtttatc gaaccgatta ccgtgggctt acacgccttt
    10861 catctggcgc agggctgcga ggggaaaaac gtaattatcg tcggggccgg gacaattggc
    10921 ctgctggcct tacagtgcgc gcgggaactg ggcgcgcgaa gcgtaacggc gattgatatc
    10981 aatccgcaga aactggaact ggcgaaagcg ctcggcgcaa cgcatacctg taatagccgg
    11041 gaaatgaccg ccgacgacat ccagaccgcg ttgtccgaca ttcagtttga tcaactggtt
    11101 ctcgaaacgg caggaactcc ccagaccgtc tcgctggcta tcgatatcac cgggccgcgc
    11161 gcgcaactgg cgctggtggg gacgttacat cacgatctca ccctgacgac gcgtacattc
    11221 gggttaattt tgcgtaaaga gctcacgctc ctcggcagtt ggatgaacta ctccgcgcca
    11281 tggccaggag aagaatggga aaccgcagcg cgcctgttgg ctgaaaaacg tcttcaactg
    11341 acccctctca ttgcccatcg cggcgatgcg gaaagctttg cagaagcagt caaagcgctt
    11401 aatggcgcgc ccatgcaggg caaaatctta cttcaacttt cctgatggta cgagccagca
    11461 acctgcgctg gctcacattt cctttcgaaa tttagcgttc acctttcgca atccttcgtt
    11521 taaactagtt acagttaatt atcaggcaaa tcaatatgaa ctcatttgag cgaagaaata
    11581 aaattgtcga cctgattaat acgcaaggca gcgtgctggt gatggacctt tcaaatacct
    11641 ttggtatttc tgaagtgact atccgtgctg acctgcgtct gctggaagag aaaggccttg
    11701 tcacccgttt tcatggcggc gcggcaaaac cgggaagtca tctggcggaa ggcgacaatc
    11761 aggaagtcat tctggaagat cggtatcaac tcgccagcga tccgaaaaag cggattgccc
    11821 aggcggctgc ggcaatggtt gaagaaggaa tgaccatcat tctggatagc gggagcacaa
    11881 cattactaat tgcggaagcg ctcgcgcgaa aaagcaatat tacggtgatc actaacagct
    11941 tgcctgccgc ttttacgcta tcagaaaata aagatctcac gctggtggtt tgcggcggta
    12001 cggtacggca taaaacccac tcaatgcacg gcacgattgc ggaacgatcg ctacacggca
    12061 tcagcgccga tgtcatgttt gtcggggcgg atggcattga tgcgacaaac ggtattacca
    12121 cgtttaacga aggttattcc attagcggcg tcatggcggc ggcggcgcac aaagttatcg
    12181 cggtactgga cgcgaccaaa tttaaccgtc gcggctttaa ccaggtattg ccgatggaca
    12241 agatcgactg tgtgataacc gatgacacca tcagcaaaca ggataaagcg gcattagcga
    12301 aaacaggcgt ggaattaatg atcgtctaaa aaggagtcgg ttatgcattg ctgatcgcga
    12361 gagtaagccc aaaggaaagg tccggcccgc tatcaccgcc caatgccccc atcactttac
    12421 ccacatcaat cacctgattg agtattaacg tgatggcgat aaaaggcggt tcccgggcgc
    12481 tcgcttttac tcttcctgct gcgccagcgc atacttatac agcgcatttt tcttcacgcc
    12541 gtgaatttct gctgccagcg ccgccgcttt tttcagcggc agctctgcct gtagcagcgc
    12601 cagcgtgcgc agcgcgtcgg cgggcaggtc gtcttcttgc gctttatgcc cttcgacaat
    12661 cagcaccatt tcgcctttgc gacggttttc atcttctttg acccacgcca gcagctcgcc
    12721 gaccggcgcg ccgtgaatgg tttcccaggt tttggtcagc tcacgcgcca gcaccacgta
    12781 acgggattcg ccccacacgg ccaccatatc ttccaggcta tccaacagac gatgggtgga
    12841 ctcataaaaa atcagcgttc gtggctccgc ttcaatggct tttagcgcat cacggcggcc
    12901 ttttgatttg gcaggcagga agccttcata acaaaaacga tctgatggta aacctgcggc
    12961 gcttaatgca gtgatagcag cacacggccc tggtagcggc accacgcgaa tccccgcttc
    13021 acggcaggta cgtaccaggt gatagccggg gtcattaatt agcggcgttc cggcatcgga
    13081 aaccagagca atgttctgcc cctctttcag cttcgcgacc agcgtttccg ctttttgttg
    13141 ttcgttatgg tcgtgcagcg caaacaaccg ggcattaatc ccaaaatgtt gcagcaataa
    13201 accggtgtga cgagtgtctt cagcggcaat taaatcaacg gcttgtaaaa cttccagcgc
    13261 gcgttgggta atatcagcca aattcccgat aggagtaggt acaataaaga gttggccctg
    13321 agaattatcc gccgattcgt tttgtttcat tgtgtcgtcc gtattgccga tttaatattg
    13381 agcattgcgt aaaaaaatat cactggatac agtatggtac cctcaacatt ttctcgtttg
    13441 aacgccgcgc gcgcgctgcc tgtcgtcctg gctgcgctac ttttcgccgg gtgcggcacc
    13501 caggcgccag atcaaagcgc agcctatatg cagggttcag cgcaagctga ttccgccttt
    13561 tacctgcatc agatgcagca aagcgcagat gatagcaaga ccaactggca attactcgcc
    13621 attcatgcac tgctgaaaga aggaaaaagc cagcaggccg tcgagttgtt caatcaaccc
    13681 ccgcaaaatc tgaacgatac ccagcgtcgc gaacaatctt tattagcggt agagatcaaa
    13741 ctggcgcaga aagatgtggc aggcgcgcag gccttgctgg ataaactaaa acccgccgac
    13801 tttgcgccac atcagcaagc gcgttactgg caggcgcaga tcgttgccag ccagggacgc
    13861 ccgtcgctta ccctgttgcg ggcgttaatc gcccaggaac cgctactggc ggcgaaagag
    13921 aaacaaaaaa atatcgacgc cacctggcag gcgctctccg ccatgacgcc ggatcaggcc
    13981 aggacgttag ttatcaacgc cgatgaaaat gtgcttcagg gctggctgga tctgcaacgc
    14041 gtctggtttg acaaccgcaa cgatccagac atgctgaaag ccgggatcgc cgactggcaa
    14101 aaacgctacc cgcaaaatcc gggggcgaaa atgctgccga cgcagctcgt caatgtacaa
    14161 cgttttaaac cagcttccac cagcaaaatc gctctgctgc tgccgctgaa cggtcaggct
    14221 gccgtgtttg gccgtaccat ccagcaaggt ttcgaagccg cgaaaaacct cggcacccag
    14281 gcggtggaaa tgcagcctgt cgccgcgcct gacgcgccgg tcgaaccaag cgtggaggag
    14341 acgcaaccac aaatgaccaa cggcgtcgcc agtccgtcgc aggcctcggt gagagatctg
    14401 actgatgacg ctccatccca gtctgctacg ccagtcagcg cgccacaaac tccccctgcg
    14461 cagcctgcta cagcaagcgc gccggcggat ccctccgctg aattaaaaat ctacgatacc
    14521 tcttcccagc cgttggatca ggtgctcgct caggttcagc aagacggcgc cagtatcgtg
    14581 gtcgggccgc tgttgaaaaa caatgtggaa gcgctgatga aaagcaacac gccgctcaac
    14641 gtgctggcgc tcaaccagcc ggaaacggta cgtagcttcc ctaatatctg ctatttcgcg
    14701 ctctctccag aagatgaagc ccgtgacgcg gcgcatcata tttatgagca gggcaagcag
    14761 tcgccgctgc tgttgatccc acgcagcgcg cttggcgatc gcgtggcgaa tgccttcacc
    14821 caggagtggc aaaaactggg cggcggcatc gtgttacagc aaaaattcgg ctccgtagcc
    14881 gagctgaaaa tgggcgtgaa cggcggcgcg gg
//
LOCUS       DAGWFR010000096        14881 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.098, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000096 DAGWFR010000000
VERSION     DAGWFR010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 14881)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14881)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14881
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.098"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(24..575)
                     /gene="kefG"
                     /locus_tag="MOX77_002938"
     CDS             complement(24..575)
                     /gene="kefG"
                     /locus_tag="MOX77_002938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-regulated potassium-efflux system
                     ancillary protein KefG"
                     /protein_id="HCA3358407.1"
                     /translation="MSQPAKVLLLYAHPESQDSVANRVLLKPAIQHNNVTVHDLYARY
                     PDFFIDTPYEQALLREHDVIVFQHPLYTYSCPALLKEWLDRVLSRGFASGPGGNQLVG
                     KYWRSVITTGEPESAYRYDALNRYPMSDVLRPFELTAAMCRMHWMPPIIVYWARRQSP
                     QTLASHAKAYGEWLANPVSAGGY"
     gene            841..2748
                     /locus_tag="MOX77_002939"
     CDS             841..2748
                     /locus_tag="MOX77_002939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCA3358408.1"
                     /translation="MIVFSSLQIRRGVRVLLDNASATINPGQKVGLVGKNGCGKSTLL
                     ALLKNEISADAGSFTLPGTWQLAWVNQETPALPQPAIEYVIDGDREYRHLEAQLNDAN
                     ERNDGHAIASIHGKLDAIDAWTVRSRAASLLHGLGFSNDQLERPVSDFSGGWRMRLNL
                     AQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSYPGTLILISHDRDFLDPIVDKIIH
                     IEQQTLFEYTGNYSAFEVQRATRLAQQQAMYESQQERVAHLQSYIDRFRAKATKAKQA
                     QSRIKMLERMELIAPAHVDNPFHFSFRAPESLPNPLLKMEKVSAGYGDRIILESIKLN
                     LVPGSRIGLLGRNGAGKSTLIKLLAGELEPLHGEIGLAKGIKLGYFAQHQLEFLRADE
                     SPLQHMARLAPQELEQKLRDYLGGFGFQGDKVTEETQRFSGGEKARLVLALIVWQRPN
                     LLLLDEPTNHLDLDMRQALTEALIDFEGALVVVSHDRHLIRSTTDDLYLVHDKKVEPF
                     DGDLEDYQQWLSDVQKQENQADDAPKENNANSAQSRKDQKRREAELRTLTQPLRKEIT
                     RLEKEMEKLNAQLAQAEEKLGDSSLYDPSRKAEMTECLQLQASAKSGLEECEMAWLEA
                     QEQLEQMMQND"
     gene            2893..3114
                     /locus_tag="MOX77_002940"
     CDS             2893..3114
                     /locus_tag="MOX77_002940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001054026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCA3358409.1"
                     /translation="MNLSITDDITFRKLTIFMMLVEKGNIARTAETLHTLEENVRCPL
                     FVHKGLFGTRPDIKVTVAVGSTGTEACVM"
     gene            complement(3116..3427)
                     /locus_tag="MOX77_002941"
     CDS             complement(3116..3427)
                     /locus_tag="MOX77_002941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monooxygenase"
                     /protein_id="HCA3358410.1"
                     /translation="MSKTLLQIHFNFSGPFGEEMTQQLVGLAESINEEPGFIWKIWTE
                     SEKNQQAGGIYLFESEETAQAYIKKHTARLKNLGVDEVTFTLFGVNDALTKINHGNLC
                     R"
     gene            3625..4612
                     /locus_tag="MOX77_002942"
                     /pseudo
     CDS             3625..4612
                     /locus_tag="MOX77_002942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462365.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hydrolase"
     gene            4609..4827
                     /locus_tag="MOX77_002943"
     CDS             4609..4827
                     /locus_tag="MOX77_002943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462366.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YheU family protein"
                     /protein_id="HCA3358411.1"
                     /translation="MIIPWQGLAPDTLDNLIESFVLREGTDYGEHERSLEQKVADVKR
                     QLQSGEAVLVWSELHETVNIMPKKQFRE"
     gene            4879..5748
                     /locus_tag="MOX77_002944"
     CDS             4879..5748
                     /locus_tag="MOX77_002944"
                     /EC_number="2.7.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribulokinase"
                     /protein_id="HCA3358412.1"
                     /translation="MSAKHPVIAVTGSSGAGTTTTSLAFRKIFAQLNLHAAEVEGDSF
                     HRYTRPEMDMAIRKARDAGRHISYFGPEANDFSLLEHTFIEYGQTGKGQSRKYLHTYD
                     EAVPWNQVPGTFTPWQPLPEPTDVLFYEGLHGGVVTPQHDVARHVDLLVGVVPIVNLE
                     WIQKLIRDTSERGHSREAVMDSVVRSMDDYINYITPQFSRTHINFQRVPTVDTSNPFA
                     AKGIPSLDESFVVIHFRNLEGIDFPWLLAMLQGSFISHINTLVVPGGKMGLAMELIML
                     PLVQRLMEGKKIE"
     gene            complement(5844..6248)
                     /locus_tag="MOX77_002945"
     CDS             complement(5844..6248)
                     /locus_tag="MOX77_002945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HCA3358413.1"
                     /translation="MQARVKWVEGLTFLGESSSGHQILMDGNSGDKAPSPMEMVLMAA
                     GGCSAIDVVSILQKGRQNVTNCEVKLTSERREDAPRLFTHINLHFIVTGGDLKEAAVA
                     RAVDLSAEKYCSVALMLEKAVNITHSYEVIAA"
     gene            6556..7188
                     /gene="crp"
                     /locus_tag="MOX77_002946"
     CDS             6556..7188
                     /gene="crp"
                     /locus_tag="MOX77_002946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016506431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cAMP-activated global transcriptional regulator
                     CRP"
                     /protein_id="HCA3358414.1"
                     /translation="MVLGKPQTDPALEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIV
                     KGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKK
                     FRQLIQVNPDILMRLSSQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTH
                     PDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVYGTR"
     gene            7237..9324
                     /locus_tag="MOX77_002947"
                     /pseudo
     CDS             7237..9324
                     /locus_tag="MOX77_002947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462370.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
     gene            complement(9367..10584)
                     /locus_tag="MOX77_002948"
     CDS             complement(9367..10584)
                     /locus_tag="MOX77_002948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HCA3358415.1"
                     /translation="MATEQTAITRATFDEVILPVYAPADFIPVKGKGSRVWDQQGKEY
                     IDFAGGIAVTALGHCHPALVEALKSQGETLWHTSNVFTNEPALCLGRKLIDATFAERV
                     LFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFQNAFHGRSLFTVSVGGQPKYSDG
                     FGPKPADIIHVPFNDLHAVKAVMDDHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDK
                     HQALLVFDEVQCGMGRTGDLFAYMHYGVTPDILTSAKALGGGFPVSAMLTTQEIASAF
                     HVGSHGSTYGGNPLACAVAGAAFDIINTPEVLQGIHTKRQQFVQHLQAIDEQFDIFSD
                     IRGMGLLIGAELKPKYKGRARDFLYAGAEAGVMVLNAGADVMRFAPSLVVEEADINEG
                     MQRFAQAVGKVVA"
     gene            complement(10670..11233)
                     /gene="pabA"
                     /locus_tag="MOX77_002949"
     CDS             complement(10670..11233)
                     /gene="pabA"
                     /locus_tag="MOX77_002949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate synthase component 2"
                     /protein_id="HCA3358416.1"
                     /translation="MILLIDNYDSFTWNLYQYFCELGAEVQVRRNDALTLAHIDALNP
                     QKIVISPGPCTPNDAGISLAVIRHYAGRIPMLGVCLGHQAMAQAFGASVVRAAKVMHG
                     KTSPVTHNGQGVFRGLPSPLTVTRYHSLIVDPATLPECFEITAWSETQEIMGIRHREW
                     DLEGVQFHPESILSEQGHALLENFLRR"
     gene            complement(11265..11867)
                     /locus_tag="MOX77_002950"
     CDS             complement(11265..11867)
                     /locus_tag="MOX77_002950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative adenosine monophosphate-protein
                     transferase Fic"
                     /protein_id="HCA3358417.1"
                     /translation="MSDKFGEGRDPYLYPGLNVMRNRLGIHQAQRLAQAAYEMTALRA
                     ATIELGPLVRGLPHLCAIHRQLYQDIFDWAGQLREVDIYQGDTRFCHFAYIEKEGNAL
                     MQDLEEEGYLVGLTHEKFVERLAHYYCEINVLHPFRLGSGLAQRIFFEQLALHAGYAL
                     SWQGIAVETWNQANQSGAMGDLSALRAIFQKAISEARETE"
     gene            complement(11857..12024)
                     /locus_tag="MOX77_002951"
     CDS             complement(11857..12024)
                     /locus_tag="MOX77_002951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhfG family protein"
                     /protein_id="HCA3358418.1"
                     /translation="MKKLTDKQKSRFWEQRRNVNFQQSRRLEGIEIPLVTLTADEALA
                     RLDELRRHYER"
     gene            complement(12133..12705)
                     /gene="ppiA"
                     /locus_tag="MOX77_002952"
                     /gene_synonym="rotA"
     CDS             complement(12133..12705)
                     /gene="ppiA"
                     /locus_tag="MOX77_002952"
                     /gene_synonym="rotA"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase A"
                     /protein_id="HCA3358419.1"
                     /translation="MLKSTLAAVAAVFALSALSPVALAAKGDPHVLLTTSAGNIELEL
                     NSQKAPVSVKNFVDYVNSGFYNNTTFHRVIPGFMIQGGGFNEQMQQKKPNPPIKNEAD
                     NGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVAD
                     KISQVPTHDVGPYQNVPTKPVVILSAKVLP"
     gene            12982..14163
                     /gene="tsgA"
                     /locus_tag="MOX77_002953"
     CDS             12982..14163
                     /gene="tsgA"
                     /locus_tag="MOX77_002953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter TsgA"
                     /protein_id="HCA3358420.1"
                     /translation="MTNSNRIKLTWISFLSYALTGALVIVTGMVMGNIADYFQLPVSS
                     MSNTFTFLNAGILISIFLNAWLMEIVPLKTQLRFGFILMVLAVAGLMFSHSLALFSAA
                     MFVLGLVSGITMSIGTFLITQLYEGRQRGSRLLFTDSFFSMAGMIFPMVAAFLLARSI
                     EWYWVYACIGLVYLAIFILTFGCEFPALGKHAQHSQAPVVKEKWGIGVLFLAVAALCY
                     ILGQLGFISWVPEYAKGLGMSLNDAGALVSDFWMSYMFGMWAFSFILRFFDLQRILTV
                     LAGMAAILMYLFITGTQAHMPWFILTLGFFSSAIYTSIITLGSQQTKVASPKLVNFIL
                     TCGTIGTMLTFVVTGPIVAHSGPQAALLTANGLYAVVFVMCFALGFVSRHRQHSSPAA
                     H"
     gene            14480..>14881
                     /locus_tag="MOX77_002954"
     CDS             14480..>14881
                     /locus_tag="MOX77_002954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HCA3358421.1"
                     /translation="MSKVRLAIIGNGMVGHRFIEDLLDKSDASLFDITVFCEEPRKAY
                     DRVHLSSYFSHHTAEELSLVREGFYEKHGVKVLVGERAITINRQEKVIHSSAGRTVYY
                     DKLIMATGSYPWIPPIKGSETQDCFVYRTIED"
BASE COUNT         3487 a         4102 c         3856 g         3436 t
ORIGIN      
        1 ggtcaataaa tcagcacctt ccatcaatag cctcccgcgc tcacaggatt cgccagccac
       61 tcgccatagg ctttcgcatg actggccagc gtctgcggcg actggcggcg cgcccagtac
      121 acaataatgg gcggcatcca gtgcatccgg cacatggccg cggtcagttc aaaagggcgg
      181 agtacatcgc tcattggata gcggtttagc gcgtcatacc ggtaagcgct ctccggctcg
      241 ccggtcgtaa tcacgctacg ccagtacttt cccaccagtt ggtttccccc tggtccgctg
      301 gcgaaccctc gactcaaaac gcgatcaagc cattctttca gtaaagccgg acagctatag
      361 gtgtaaaggg gatgctgaaa aacaatgacg tcgtgctcac gtaacagggc ttgttcatag
      421 ggcgtatcga taaaaaaatc aggatagcgc gcataaagat cgtgcacggt tacgttattg
      481 tgctgtatgg ccggtttaag cagtacccgg ttagcaaccg agtcctgaga ttccggatgg
      541 gcatacaaca gcaagacttt cgctggctga gacatcaatc cccctcccgg ttgttttggg
      601 tcgatacatg ccattcttca ggccgcttct acgttgacag cgtttgttca actcagaaac
      661 gtactccatg tccgccgctg gggattaatg agagatattc ttgtccctca ccaaaggcgg
      721 cctgaatgat tttgtgtatc gttgttgttt tgagctacca ttgcgctcca gcgcggcggt
      781 acgcccgaat attacattat cataatgata aattaacata gtctgaacat acggcgcctt
      841 atgattgttt tctcctcgtt acaaattcgt cgcggcgtgc gcgtcctact ggacaatgcc
      901 tcggctacca ttaatccagg ccagaaagtc ggcctggtgg gtaaaaacgg ctgcggtaaa
      961 tctaccctgc tggcattgct aaaaaatgaa atcagcgccg atgccgggag ttttaccctg
     1021 cccggaacct ggcaattagc gtgggtgaat caggaaacac ctgcgttgcc tcagccagcg
     1081 attgagtatg tcattgacgg cgaccgtgaa taccggcatc tggaggcgca gcttaacgac
     1141 gccaacgaac gtaacgacgg gcatgctatc gcctccatac acggtaagct ggacgccatc
     1201 gacgcatgga ccgttcgctc gcgcgccgcc agcctgttac acggcctcgg cttctctaac
     1261 gatcagctgg aacgtccggt cagcgacttt tccggcggct ggcggatgcg ccttaatctg
     1321 gcccaggcgc tgatttgccg ttccgattta ctgctgctcg acgaaccgac caaccacctc
     1381 gatctggatg ccgttatctg gctggaaaaa tggctgaaga gctatccagg caccctgatt
     1441 ctgatctccc acgatcgcga ttttcttgac ccgatagtgg ataaaattat ccatatcgaa
     1501 cagcagactc tgttcgagta caccggtaac tacagcgcgt ttgaagttca gcgcgccacg
     1561 cgcctggcgc agcagcaggc gatgtatgag agtcagcagg agcgtgtggc gcatctgcaa
     1621 agctacatcg accgtttccg cgccaaggcc accaaggcca agcaggcgca aagccgtatc
     1681 aagatgctgg agcgtatgga gttgattgcg ccggctcatg tcgacaaccc gttccatttc
     1741 agcttccgcg cgccggaaag cctgccgaac ccgctgctga agatggaaaa agtcagcgca
     1801 ggttatggcg atcgcatcat tctggaatcc atcaagctga acctggtgcc cggctcgcgt
     1861 atcggcctgc tgggccgcaa cggcgcgggg aaatcgacgc tgatcaagct gctggcgggc
     1921 gaactggaac cgttgcacgg tgaaatcggc ctcgccaaag gcattaagct cggctacttc
     1981 gcccagcacc aactggagtt cctgcgcgcc gatgaatccc cgctgcagca tatggcgcgt
     2041 ctggcgccgc aggaactgga gcagaagctg cgcgactatc tcggcggctt cggtttccag
     2101 ggcgacaaag taacggaaga gacgcaacgt ttctccggcg gcgagaaagc gcgcctggta
     2161 ctggcgctga tcgtctggca gcgtccaaat ctgctactgc tcgatgaacc aaccaaccac
     2221 ctggatctcg acatgcgtca ggcgctcacc gaagcgctga ttgatttcga aggcgcattg
     2281 gtcgtcgtgt cgcacgaccg ccacctgatt cgctccacca ccgacgacct ctatctggtt
     2341 cacgacaaaa aggtcgaacc gttcgacggc gacctggagg attatcagca gtggctgagc
     2401 gacgtgcaga agcaggaaaa ccaggccgac gacgcaccga aggaaaacaa cgccaacagc
     2461 gctcagtcac gcaaagatca gaagcgtcgc gaagccgagc tacgcactct aacgcagccg
     2521 ctgcgtaaag agattacccg tctggaaaaa gagatggaaa agctcaacgc ccaactggcg
     2581 caggcggaag agaagcttgg cgacagcagc ctgtatgacc caagccgtaa agcggagatg
     2641 accgagtgtc tgcaactgca ggccagcgcc aaatccgggc tggaagaatg tgaaatggca
     2701 tggcttgagg cgcaggagca gcttgagcag atgatgcaga acgactaaga gcctatccca
     2761 ttaggctatt ttattcgcca ttttagggcc gggcagtgct cgaaatcctc acggtttctg
     2821 cgcgctgtcc ggccccaaac tggcttcaac aattacgcct actgggatag gctctaacgc
     2881 acggggcgga cgatgaacct gtctatcacc gatgacatta ccttccgcaa gctcaccatc
     2941 ttcatgatgc ttgtggagaa gggtaacatc gcccgcaccg ccgagacgct gcacacgctg
     3001 gaagagaacg ttcgttgtcc actgttcgtc cataaaggcc tcttcggtac tcgtcccgat
     3061 ataaaggtta ccgttgcggt cggcagcacc ggaacagaag cctgcgttat gtgagttagc
     3121 ggcaaaggtt gccgtgattt attttcgtca gcgcgtcgtt cacgccaaat aatgtaaacg
     3181 tcacctcatc aacgccaaga tttttcagac gcgcagtgtg ttttttaata taagcctgcg
     3241 ccgtttcttc ggattcaaac aagtaaatgc cgccagcttg ctggtttttc tcgctttctg
     3301 tccagatttt ccagatgaag cccggctcct cattgataga ctccgccagc ccgaccagtt
     3361 gctgagtcat ctcctcgcca aaagggccgc taaagttaaa atggatctgt aaaagtgtct
     3421 tcgacatgcc ttctccttga gtcacataac tatcgtgttg ccacactacc acgattaatt
     3481 cggctgatgc agaggttcac gcgatttctg tggggtattg cgcgcgcctt gcataccgcc
     3541 ccctctggtg aaatgaggcg caattttatt tcgccagacg accaattgaa cgtaaaatca
     3601 catattgact aatctgtgaa ccttatgcgc ggtatagtat tgtttccaat tatcaattgt
     3661 tctggtgcta tggttgagat cacgtccaca gaaatgaccc cgcctgtcaa tgactcgcat
     3721 gaatttattc ccatgcgtgg cattcgtaat cgccatttac aaactatgct gccacgttta
     3781 atccgccgca aagtgaagtt caacgcccac tggcagcggc tggagctacc ggacggcgat
     3841 tttgtcgatc tggcatggag cgaagaaccg caacaggcaa agcataaagc gcggctggct
     3901 gggcgtggtg atgcactttc gcggctgtag cggcgaaccc aaccgtctga atcgtattta
     3961 ccactccggt gaaacggagg acggagcctg gtttttacgc tggctacagc gggagttcgg
     4021 cgccgttccg acagccgccg tgggctattc gctcggcggt aatatgctgg cgtgcctgct
     4081 ggcgaaagaa ggccgcgata ttcccatcga ggcggcggta attgtttctg cgcctttcgt
     4141 tctcgaagcc tgtagctacc acatggacaa agggttttcc cgcgtctatc agcgttattt
     4201 gcttaatctg ttaaaagcga atgcgtcacg caagctggcg gcgtatcccg ggtcgctgcc
     4261 ggtgaatctg gcgcaactga aatcaatgcg ccgtattcgc gaatttgacg acctgatcac
     4321 cgcgaaaatt cacggctttg ccgacgccat cgactactat cgtcagtgta gcgccatgcc
     4381 gttgcttaac cagattgcta aaccgacgct gattattcac gctaaagacg atccgtttat
     4441 ggatcatcat gtgatcccta aagcggaaga tctgcccccg caggtggagt atcagctgac
     4501 tgagcatggc ggacacgtag gatttatcgg cggtacgcca ctgcgccctg aaatgtggct
     4561 ggaacgccga attcctgact ggctgacaac gtacctggag gcgtcatcat gatcattccc
     4621 tggcaggggc tcgcccccga cacgctggac aacctgatcg aaagctttgt gttgcgcgaa
     4681 ggcaccgatt atggtgaaca tgaacgttcg cttgaacaaa aagtcgctga cgtaaaacgc
     4741 caactgcaat ccggcgaggc cgtgctggta tggtctgaat tacatgaaac ggtcaatatt
     4801 atgccgaaaa agcagtttcg cgaataaaac gcctttgccg acaatacatt attaataaag
     4861 ctcaatcatg gagttgccat gtcagccaaa catccggtga tagcagtaac agggtcaagc
     4921 ggcgcgggga ccaccaccac cagcctcgcg tttcgtaaaa ttttcgcgca gttaaatctg
     4981 catgccgccg aggtggaagg cgacagtttt catcgttaca cccgcccgga aatggacatg
     5041 gcgatccgca aagcgcgtga cgccgggcgg catatcagct atttcgggcc tgaagccaat
     5101 gacttcagcc tactggaaca tacctttatt gagtacgggc agacgggtaa aggccagtcg
     5161 cgtaaatatc tgcataccta tgatgaagcc gtaccgtgga atcaggttcc cggcacgttt
     5221 accccctggc agccgcttcc tgaaccgacc gatgtgctgt tttatgaagg actgcacggc
     5281 ggcgtcgtca ccccacaaca tgatgtcgcg cgtcatgttg atctgttggt tggcgtggtg
     5341 cctatcgtca accttgagtg gattcagaaa ctaatccgcg acaccagcga gcgcggacac
     5401 tcccgtgaag cggtgatgga ttccgtggtg cgttccatgg acgactacat caattacatt
     5461 acgccgcagt tctcgcgtac ccatatcaac ttccagcgcg taccgaccgt cgacacgtcc
     5521 aatccgttcg ccgcaaaggg tattccctcg ctggatgaga gttttgtggt gatccatttc
     5581 cgcaacctgg aagggatcga ttttccctgg ctcctggcga tgctccaggg ctcgttcatt
     5641 tctcacatta atacattagt ggtgccgggc ggcaaaatgg ggctggcgat ggagctgatt
     5701 atgttgccgc tggtgcagcg attaatggaa ggcaaaaaaa tcgaataacc gcggtgaaat
     5761 gcccgatggc gctacgctta tcgggcctac gagataaaaa cgggtaggcc ggataaggcc
     5821 acgccgccat ccggcatcac gtgttacgcc gcaatcactt catacgaatg ggtaatattg
     5881 accgcttttt ccagcattag cgccaccgag caatattttt ccgcggagag atcgacagcg
     5941 cgcgcgacgg cagcctcttt cagatcgccg ccggtaacga taaaatgcaa attaatgtgc
     6001 gtaaacaggc gcggcgcgtc ttcccggcgc tcggatgtta gcttcacttc gcagttggtg
     6061 acattctgac ggcccttttg cagaattgat accacatcaa tagcgctaca tccgccagcc
     6121 gccattaata ccatctccat cgggctcggc gctttgtcac cggagttacc atccattaaa
     6181 atctggtggc cggaggagga ctctccgagg aacgtgagtc cttcaaccca ctttacacgc
     6241 gcttgcatat ttcgtaactc caatgtttca attttcctga aagattacgc gcatacaaca
     6301 aaactcgcaa tggaaggcga cctgggtcat gctgaagcga gacaccaaga gacacacggc
     6361 gaaagctatg ctaaaacaga caagatgcta cagtaataca ttgacgtact gcatgtatgc
     6421 agaggacatc acattacagg ctacaatcta ttttcgtagc ccccttccca ggtagcggga
     6481 agtatatttt tgcaacctca gagacagtgc cgttttctgg ctctggagac agcttataac
     6541 agaggataac cgcgcatggt gcttggcaaa ccgcaaacag acccggctct tgaatggttc
     6601 ttgtctcatt gccacattca taagtacccg tcaaagagca cgctgattca ccagggtgaa
     6661 aaagcagaaa cgctgtacta catcgttaaa ggctccgtgg cagtgctgat caaagatgaa
     6721 gaagggaaag aaatgatcct ttcttatctg aatcagggtg attttattgg tgaactgggc
     6781 ctgtttgaag aaggccagga acgcagcgcc tgggtacgtg cgaaaaccgc atgtgaggtc
     6841 gctgaaattt cctacaaaaa atttcgccaa ttaatccagg tcaacccgga tattctgatg
     6901 cgcctctctt cccagatggc tcgtcgctta caagtcacct ctgaaaaagt aggtaacctc
     6961 gccttccttg acgtcaccgg gcgtatcgct cagacgctgc tgaatctggc gaaacagccc
     7021 gatgccatga cgcacccgga tgggatgcag atcaaaatca cccgtcagga aatcggccag
     7081 atcgtcggct gctcccgcga aaccgttggt cgtattttga aaatgctgga agatcaaaac
     7141 ctgatctccg cgcatggcaa gaccatcgtc gtctacggca cccgttaatc ccgtcagaat
     7201 ggcgcgtttt atcatgcgcc atttttgttt gcatcgatgt ggcgaagact gatttatcac
     7261 ccagagatta attacgcact acggcaaacg ctggtgctgt gcctgcctgt ggctgttggt
     7321 ttattgatag gccagctaca cctgggcttg cttttctctc tcgttcccgc ctgctgcaac
     7381 attgcaggtc tggatacccc gcacaaacgc ttttttaaac gcctgatcat cggcgcgtcg
     7441 ctgttcgccg gatgcagtct ggtaacgcaa cttctgctgg cggaatccat ccccctgccg
     7501 ttgatcctga ccgggctcac gctggtgctt ggcgtgacgg cggaaattag cccgcttcac
     7561 gcgcggctac tgccagcgtc gctgattgcc gccatcttta ccctgagcct tgcgggatac
     7621 atgcccgtct gggagccgct gctcatttat gcgctgggca cgctatggta cggcgtgttt
     7681 aactggtttt ggttctgact atggcgcgaa cagccgctgc gcgagtcatt gagtttgtta
     7741 taccgtgaac tggccgatta ttgtgaagcg aaatacagcc tgctcaccca acatatcgat
     7801 ccggaaaaag cgctgcctcc cctgctgata cgccagcaaa aagcggtcga tctcattacc
     7861 cagtgttacc aacagatgca tatgctttcg gcgcacaaca ataatgatta caagcgtcta
     7921 ctacgggctt ttcaggaagc gatggatttg caggagcaca tctccgtcag cttgcatcag
     7981 ccggaagagg tacagaaact ggtagaacgc agccatgcgg aagaggtgat tcgctggaat
     8041 gcgcaaacgg tcgccgcccg tctgcgcgtg ctggcggatg acattcttta tcatcgtctg
     8101 ccgacgcgct tctccatgga aaaacagatt ggcgctctgg agaagatcgc taatcagcat
     8161 cctgaaaatc cggtaggcca gttctgctat tggcacttca gtcgaatcgc ccgtgtgctg
     8221 cgtactcagc ggccgctgta cgcccgcgac ctgatggccg ataaacagcg tcgtctgccg
     8281 ctacttccgg cgctgaaaaa ttatatgtct ctaaaatcgc cggcgctacg caacgccgga
     8341 cgcatcagcg tgatgatgag catcgccagt ctgatgggca gcgcgttgca cctgcctaaa
     8401 ccgtactgga tcctcatgac ggtgctgttt gtcacccaaa acagctatgg cgcgacgcgc
     8461 gtacgtattc tgcaccgttc ggtcggaacg ctggtcggcc tggtgattgc cggcgtcacg
     8521 ctgcacttac atattcccga aagcattacg ctggcggtca tgctggtact aacgctggca
     8581 agttatctga ttattcgtaa aaactacggc tgggcgacgg tcggctttac ggtgacggcg
     8641 gtatacacca tccagttact gacgttaaac ggagagcagt ttattgtgcc gaggctgatc
     8701 gatacgctga ttggctgttt aattgccttt ggcggcatgg tctggctgtg gccgcaatgg
     8761 caaagcgggc tattacgtaa aaacgcccat gatgcgctgg aagccgatca agaagctatc
     8821 cgactgatcc tcagtaacga tccgcaggcc accccgctcg cttatcaaag aatgcgggtc
     8881 aaccaggcgc ataacacgtt attcaactcg ttaaatcagg caatgcagga acccggattc
     8941 aatacccact atctgtcgga tatgaaactg tgggtcacgc acagccagtt tattgtcgag
     9001 catatcaacg ctatgacgac gctggcgcgg gaacacacca tgctgacgcc tgatctggcg
     9061 cagcgctatc tggaatcttg cgagattgcg attcagcgct gccagcagcg cctagagtac
     9121 gacaggccag gcggctccgg cgatgtcaat attctggagt cgccggacat gccgtcacat
     9181 ggcttattga gcactctgga acaacattta cagcgcatca ttggccatct gaacaccatg
     9241 cacaccattt cgtcgatggc ctggcgtcag cgtccgcatc acggtatctg gctgagtaag
     9301 cggctacggg atacaaaagg ttaagaccga ctgccggatg cgctacgctt atccggcaat
     9361 ccgccatcag gccaccacct tccctaccgc ctgcgcaaag cgctgcattc cttcattgat
     9421 atccgcctct tccaccacca gcgacggggc aaaacgcatc acgtcggctc cggcattgag
     9481 caccatcacg ccggcctccg cgcctgcgta cagaaaatcg cgcgcccgac ctttgtactt
     9541 cggcttcagt tccgcgccaa tcagcagccc catgccgcga atatcgctga aaatgtcaaa
     9601 ttgctcgtca atcgcctgca aatgttgcac aaactgttgc cgcttagtgt gaatgccttg
     9661 tagtacctct ggcgtattaa taatatcgaa tgccgcgcca gccaccgcac aggccagcgg
     9721 attgccgcca taggttgaac catgcgaacc gacatggaag gccgaggcga tctcctgcgt
     9781 ggtcagcatg gcgctcaccg gaaaaccgcc gcctaacgct ttggcgctgg tgaggatatc
     9841 cggcgtgacg ccgtagtgca tataggcaaa caggtctccg gtgcgcccca tcccacactg
     9901 cacttcatca aacaccagca acgcctgatg cttgtcacac aggtcgcgta accctttgag
     9961 gaattccggt gtagccgcct gcacgccgcc ttcaccctga atcggctcga ctaccaccgc
    10021 gcaggtgtgg tcatccatta ccgctttcac cgcatgaaga tcgttgaagg gaacgtgaat
    10081 aatatcggcg ggtttcggcc caaagccgtc ggaatatttc ggctgcccgc ctacagagac
    10141 ggtaaacaag gaacggccat gaaaggcgtt ctggaaggca atgattttcg ttttgaacgg
    10201 gctatggcgc acgcaggcat aatgacgcgc cagtttaaaa gcggtttcgt tcgcttcggt
    10261 gccggaattc ataaacagca cgcgctcggc aaacgtggcg tcgatcagtt tacgtcccag
    10321 acacaacgcc ggttcattgg taaaaacgtt actggtatgc cacaaggttt ccccctggga
    10381 tttcagcgcc tcgaccagtg ccggatggca atggcccagc gcagtcactg caatcccgcc
    10441 ggcgaaatcg atatactctt tgccctgctg atcccatacg cggctgcctt tacctttgac
    10501 cggaataaag tccgccggtg cataaacagg cagaattacc tcatcaaaag ttgcgcgcgt
    10561 aatagccgtt tgttcagttg ccatatcatt accacccggt taagtagaaa tgccagtgaa
    10621 attataatca caaaatatga ataaaaaatc actcaatagc aaccacaaat caacgccgga
    10681 ggaaattttc cagcagagcg tgtccttgtt cgctgagaat actttccggg tggaactgca
    10741 cgccttccag atcccactcg cggtggcgaa tgcccataat ctcctgcgtt tcgctccagg
    10801 cggtgatctc aaaacactca ggcaacgtgg cagggtcgac aatcagcgag tggtaacgtg
    10861 tcacggttaa cgggctgggc aatccccgaa acacgccctg tccattatgc gtaacaggtg
    10921 acgttttacc gtgcatcact ttcgctgccc gcaccaccga cgcgccaaag gcctgcgcca
    10981 tcgcctgatg acccaggcaa acgcccagca tcggaatacg tccggcataa tggcggatga
    11041 ccgccagtga aatgccagcg tcatttggcg tacaggggcc aggagagata acgatttttt
    11101 gcgggttcaa agcgtcaatg tgcgccagcg tcagcgcatc attgcgccga acctgcactt
    11161 ccgcgcccag ttcacaaaaa tactggtaga ggttccaggt aaaggaatca tagttatcga
    11221 taagcaggat catggcggct ccgggtcagt agaaccgccc tattttactc agtttcgcga
    11281 gcttcgctta tcgctttctg aaaaatcgcc cgcaaagcgg agagatcgcc catcgcgccg
    11341 ctctggttcg cctgattcca tgtttcaacc gcaatacctt gccaactcag cgcgtagcct
    11401 gcatgtagcg ccagttgttc aaagaagatg cgctgcgcca gcccgctccc caaacgaaac
    11461 ggatgaagca cattaatttc acagtagtaa tgcgccagcc gctcgacaaa cttctcgtgc
    11521 gtcagaccaa ccaggtagcc ctcttcttcc agatcctgca tcagggcatt gccctctttt
    11581 tcgatatagg caaagtggca gaaacgggta tcgccctggt aaatatcgac ctcccgcagt
    11641 tgccctgccc agtcgaaaat atcctgatag agctggcgat gaatcgcgca cagatgaggc
    11701 aagccgcgta ccagcggccc cagttcaatc gtagcggcgc ggagcgcggt catttcgtat
    11761 gccgcttgcg ccagtcgctg ggcctgatga atccccagcc gattacgcat cacattcagc
    11821 cccggataga ggtacggatc gcgcccttcg ccaaatttat cgctcatagt gcctccgaag
    11881 ctcgtcaaga cgtgccagcg cttcatcggc ggtcagggtt actaagggga tctcaatacc
    11941 ttcgagacgg cggctttgct ggaagttaac gttgcgccgc tgttcccaaa agcgtgactt
    12001 ttgtttatcg gtaagtttct tcacctggcc tccctgaata tgcctgtgat tgaccacaag
    12061 tataagcagc aatttcaggt tacgctgaga cagggagaaa acgcgggcgg ctcgcacccg
    12121 cgcaggcatg ttttatggca ggactttcgc ggaaaggata acgactggtt ttgtcggcac
    12181 attctgataa ggcccgacat cgtgcgtcgg tacctgtgag attttatcgg cgacatccat
    12241 accttttacc actttaccaa ataccgcata gccaaagtcg cgctggccgt ggtcgagaaa
    12301 agcgttatcc gcgacgttaa taaagaactg gctggtggcg ctgtctttat ctgcggtgcg
    12361 agccatcgcg atcgtgccgc gagtattacg cagaccgttg tcggcttcat tcttaatagg
    12421 cggattcggt ttcttctgct gcatctgctc gttaaaacca ccaccctgaa tcataaagcc
    12481 aggaataacg cggtgaaacg tagtgttgtt atagaaacca ctgttgacgt aatcgacaaa
    12541 gtttttcaca gaaaccggcg ctttctggct gttcagctcc agctcaatat tcccggcgga
    12601 ggtggttaac agcacatgag gatcaccttt tgctgccaac gctacgggag aaagagcaga
    12661 aagagcgaaa acagctgcga cagccgccag agtcgatttg agcatgagat ttccttaaag
    12721 agagcagaaa taaagcaagt ggaatgattc taaagagcct tcctgggcca ggccagccct
    12781 ttacctaatt ttacgtacat gaaacaaatg taacgttacg acgcaacgcc ttgtccttgc
    12841 aatatgatgt gacaaacatc acattaaaaa atgtaatgaa cattactatc actaataatt
    12901 atttaaatac atcacaaaag cgcttaaaat ctgcccgctt aacgcgccct ccacgcgctt
    12961 cacttctctt caaggccaga catgactaac agcaaccgca tcaagctcac atggatcagc
    13021 tttctttcct acgccctgac cggggcgctg gtgattgtca ccgggatggt gatgggaaat
    13081 atcgcagact attttcagtt gcccgtttcc agcatgagta acacctttac tttcctgaat
    13141 gccgggattt tgatctcgat cttcctcaat gcgtggttga tggaaatcgt cccgctgaaa
    13201 acacagctac gctttggttt tatcctgatg gtactggcgg tggccgggct gatgttcagc
    13261 catagcctgg cgttgttctc agcggcgatg tttgtgctgg ggctggtcag cgggatcacc
    13321 atgtcgattg gcaccttcct gattacgcaa ctgtatgaag ggcgtcagcg cggttcccga
    13381 ctgctgttta ccgactcctt cttcagcatg gcggggatga tttttcctat ggtcgccgcc
    13441 ttcctgctgg cgcgtagtat tgagtggtac tgggtctacg cctgcatcgg cctggtctac
    13501 ctggcgattt ttatcctgac cttcggctgt gaatttccgg cgctgggtaa acatgcgcag
    13561 cactctcagg cgcctgtcgt caaagaaaaa tggggcattg gcgtactgtt tctggccgtc
    13621 gccgcgctgt gctatatcct cggtcaattg ggctttatct cctgggtgcc ggaatacgcc
    13681 aaaggcctcg gcatgagcct gaatgacgcc ggggcgctgg tgagtgattt ctggatgtcc
    13741 tatatgtttg gcatgtgggc gttcagcttt atcctgcgct ttttcgatct gcaacgcatc
    13801 ctgaccgtac tggcgggtat ggcggcgata ctgatgtatc tgtttattac cggcacgcag
    13861 gcgcatatgc cgtggtttat tctgacgctg ggcttcttct ccagcgccat ttatacctcc
    13921 atcattacgc tgggatcgca gcaaacgaaa gtggcctcgc ctaagctggt taactttatt
    13981 ctgacctgcg gcaccatcgg aacgatgctg accttcgtcg tcaccggccc gattgtggct
    14041 cacagcggcc cacaggcggc gttactcacc gcgaatggtc tgtatgcggt ggtctttgtg
    14101 atgtgctttg cgctcggctt tgtctcccgt catcgccagc atagttcgcc agcggcgcat
    14161 taataatgat tgccggatgg cgacgcgatg cgtcttatcc ggcctacagc gtaagctgtt
    14221 ggtaggccgg ataaggcgac gtcgccctcc ggcactctat ccccccctga cgaggtaggc
    14281 ttgttggtct aaaaacccct cattttgtat gttatttgta caaacctgaa aagcctgaca
    14341 attccgccac ttataaaaac ccagacaaat cagccatata cccattaaga ggtatataaa
    14401 ggtgaatttg atttacatca ataagcgggg ttgctgaatc gttaaggtag gcggtaatag
    14461 aaaagaaatc gaggcaaaaa tgagcaaagt cagactcgct attatcggta atggtatggt
    14521 cggccaccgc tttattgagg atctccttga taaatccgac gctagcctgt tcgacattac
    14581 cgtgttctgt gaagaacccc gtaaagccta tgaccgtgtc cacctgtcat cctacttctc
    14641 tcaccacacc gcggaagagc tctctctggt gcgtgaagga ttttacgaga agcacggcgt
    14701 aaaggtactg gttggcgaac gcgcaattac cattaaccgt caggagaaag tgattcactc
    14761 cagcgcgggt cgtaccgttt attatgacaa gctgatcatg gcgaccggtt cctatccgtg
    14821 gattccgccg attaaaggct ccgaaaccca ggattgcttc gtttaccgta ccattgaaga
    14881 c
//
LOCUS       DAGWFR010000097        14880 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.099, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000097 DAGWFR010000000
VERSION     DAGWFR010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 14880)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14880)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14880
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.099"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..208)
                     /gene="glmM"
                     /locus_tag="MOX77_002955"
     CDS             complement(<1..208)
                     /gene="glmM"
                     /locus_tag="MOX77_002955"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462205.1"
                     /note="catalyzes the conversion of glucosamine-6-phosphate
                     to glucosamine-1-phosphate; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HCA3358422.1"
                     /translation="MSNRKYFGTDGIRGRVGNAPITPDFVLKLGWAAGKVLARHGSRK
                     IIIGKDTRISGYMLESALEAGLAAA"
     gene            complement(201..1048)
                     /gene="folP"
                     /locus_tag="MOX77_002956"
                     /pseudo
     CDS             complement(201..1048)
                     /gene="folP"
                     /locus_tag="MOX77_002956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462206.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
     gene            complement(1153..3087)
                     /gene="ftsH"
                     /locus_tag="MOX77_002957"
     CDS             complement(1153..3087)
                     /gene="ftsH"
                     /locus_tag="MOX77_002957"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014833437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HCA3358423.1"
                     /translation="MAKNLILWLVIAVVLMSVFQSFGPSESNGRKVDYSTFLQEVNQD
                     QVREARINGREINVTKKDSNRYTTYIPINDPKLLDNLLTKNVKVVGEPPEEPSLLASI
                     FISWFPMLLLIGVWIFFMRQMQGGGGKGAMSFGKSKARMLTEDQIKTTFADVAGCDEA
                     KEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISG
                     SDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLN
                     QMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVH
                     MRRVPLATDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKI
                     MMGAERRSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLP
                     EGDAISASRQKLESQISTLYGGRLAEEIIYGVEHVSTGASNDIKVATNLARNMVTQWG
                     FSEKLGPLLYAEEEGEVFLGRSVAKAKHMSDETARIIDQEVKALIERNYNRARQILTD
                     NMDILHAMKDALMKYETIDAPQIDDLMARREVRPPAGWEDPNGTNNSDSNGTPQAPRP
                     VDEPRTPNPGNTMSEQLGDK"
     gene            complement(3191..3817)
                     /gene="rlmE"
                     /locus_tag="MOX77_002958"
     CDS             complement(3191..3817)
                     /gene="rlmE"
                     /locus_tag="MOX77_002958"
                     /EC_number="2.1.1.166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uridine(2552)-2'-O)-methyltransferase
                     RlmE"
                     /protein_id="HCA3358424.1"
                     /translation="MTGKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQ
                     SDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDPIVGVDFLQGDFRD
                     ELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALDMCRDVLAPGGS
                     FVVKVFQGEGFDEYLREIRSLFTKVKVRKPDSSRARSREVYIVATGRK"
     gene            3944..4237
                     /gene="yhbY"
                     /locus_tag="MOX77_002959"
     CDS             3944..4237
                     /gene="yhbY"
                     /locus_tag="MOX77_002959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014833438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome assembly RNA-binding protein YhbY"
                     /protein_id="HCA3358425.1"
                     /translation="MNLSTKQKQHLKGLAHPLKPVVMLGNNGLTEGVLAEIEQALEHH
                     ELIKVKIASEDRETKTLIVDAIVRETGACNVQVIGKTLVLYRPTKERKISLPR"
     gene            complement(4393..4869)
                     /gene="greA"
                     /locus_tag="MOX77_002960"
     CDS             complement(4393..4869)
                     /gene="greA"
                     /locus_tag="MOX77_002960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006178768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HCA3358426.1"
                     /translation="MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKE
                     NAEYHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDTDEE
                     QTYRIVGDDEADFKQNLISVNSPIARGLIGKEQDDVVVIKTPGGDVEYEVLKVEYL"
     gene            5117..6550
                     /gene="dacB"
                     /locus_tag="MOX77_002961"
     CDS             5117..6550
                     /gene="dacB"
                     /locus_tag="MOX77_002961"
                     /EC_number="3.4.16.4"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine-type D-Ala-D-Ala carboxypeptidase"
                     /protein_id="HCA3358427.1"
                     /translation="MRFSRFIIGLTTSIAFSVQAANIDEYIKQLPAGANLALMVQKIG
                     APAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVDNGILKGDLI
                     ARFGGDPTLRRQDIRNMVATLKKSGVTQIDGNVLIDTSIFASHDKAPGWPWNDLTQCF
                     SAPPAAAIVDRNCFSVSLYSAQKPNDLAFIRVASYYPVTMFSQVRTLPRGSADAQYCE
                     LDVVPGDLNRYTLTGCLPQRADPLPLAFAIQDGASYAGAILKQELKEAGITYRGTLLR
                     QTQVNEPGTIVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHVRFNVPGTWRAGSD
                     AVRQILRQQAGIDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPL
                     AGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAV
                     PPADQRNRRIPLVRFESRLYKDIYQNN"
     gene            complement(6681..7853)
                     /gene="cgtA"
                     /locus_tag="MOX77_002962"
     CDS             complement(6681..7853)
                     /gene="cgtA"
                     /locus_tag="MOX77_002962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Obg family GTPase CgtA"
                     /protein_id="HCA3358428.1"
                     /translation="MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGD
                     VWMEADENLNTLIDYRFEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTG
                     ETMGDMTKHGQRLLVAKGGWHGLGNTRFKSSVNRTPRQKTNGTPGDKRDLLLELMLLA
                     DVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDSEKSFVVADIPGLI
                     EGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGSDPVENARIIIGELEKYSQDLAAK
                     PRWLVFNKIDLMDKSEAEEKAKAIAEALGWEGKYYLISAASQLGVKDLCWDVMTFIIE
                     NPIAQAEEAKQPEKVEFMWDDYHRQQLAEVEEDADDDWDDDWDEDDEEGVEFIYKR"
     gene            complement(7869..8834)
                     /locus_tag="MOX77_002963"
     CDS             complement(7869..8834)
                     /locus_tag="MOX77_002963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012135318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HCA3358429.1"
                     /translation="MKQQAGIGILLALTTAMCWGALPIAMKQVLEVMEPSTIVFYRFL
                     MASIGLGAILAVKRKLPPLRIFRKPRWLVLLAIATCGLFGNFILFSSSLQYLSPTASQ
                     VIGQLSPVGMMVASVFILKEKMRGTQVIGALMLLSGLVMFFNTSLIEIFTRLTDYTWG
                     VIFGVGAAMVWVSYGVAQKVLLRRLASQQILFLLYTLCTIALLPLAKPMVIAQLSDWQ
                     LACLIFCGLNTLVGYGALAEAMARWQAAQVSAIITLTPLFTLLFSDLLSMAWPDFFAR
                     PMLNLLGYLGAFVVVAGAMYSAIGHRIWGGLRKHETVVSQPRSGE"
     gene            complement(8964..9221)
                     /gene="rpmA"
                     /locus_tag="MOX77_002964"
     CDS             complement(8964..9221)
                     /gene="rpmA"
                     /locus_tag="MOX77_002964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004933559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HCA3358430.1"
                     /translation="MAHKKAGGSTRNGRDSEAKRLGVKRFGGEAVLAGSIIVRQRGTK
                     FHAGTNVGCGRDHTLFAKADGKVKFEVKGPKNRKYISIVAE"
     gene            complement(9241..9552)
                     /gene="rplU"
                     /locus_tag="MOX77_002965"
     CDS             complement(9241..9552)
                     /gene="rplU"
                     /locus_tag="MOX77_002965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015960603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HCA3358431.1"
                     /translation="MYAVFQSGGKQHRVSEGQTVRLEKLDIATGETIEFAEVLMIANG
                     EEVKIGVPFVDGGVIKAEVVAHGRGEKVKIVKFRRRKHYRKQQGHRQWFTDVKITGIS
                     A"
     gene            9811..10782
                     /gene="ispB"
                     /locus_tag="MOX77_002966"
     CDS             9811..10782
                     /gene="ispB"
                     /locus_tag="MOX77_002966"
                     /EC_number="2.5.1.90"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="octaprenyl diphosphate synthase"
                     /protein_id="HCA3358432.1"
                     /translation="MNLEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIISGGG
                     KRIRPMIAVLAARAVGYQGNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAA
                     FGNAASVLVGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITE
                     ENYMRVIYSKTARLFEAAAQCSGILAGCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSA
                     DGEHLGKNVGDDLNEGKPTLPLLHAMRHGTPEQSAMIRTAIEQGNGRHLLEPVLEAMT
                     TCGSLEWTRQRAEEEADKAISALQILPDTPWREALIGLAHIAVQRDR"
     gene            11015..11302
                     /gene="sfsB"
                     /locus_tag="MOX77_002967"
     CDS             11015..11302
                     /gene="sfsB"
                     /locus_tag="MOX77_002967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator SfsB"
                     /protein_id="HCA3358433.1"
                     /translation="MESKLIDWHPADIIAGLRKKGTSMAAESRRNGLSSSTLANALTR
                     PWPKGELIIAKALGTEPWVIWPSRYHDPRTHEFIDRTRLMRARNKDKQNVE"
     gene            complement(11361..12620)
                     /gene="murA"
                     /locus_tag="MOX77_002968"
     CDS             complement(11361..12620)
                     /gene="murA"
                     /locus_tag="MOX77_002968"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HCA3358434.1"
                     /translation="MDKFRVQGPTTLQGEVTISGAKNAALPILFAALLAEEPVEIQNV
                     PKLKDVDTSMKLLSQLGAKVERNGSVHIDASQVNVFCAPYDLVKTMRASIWALGPLVA
                     RFGQGQVSLPGGCTIGARPVDLHITGLEQLGATIKLEEGYVKASVEGRLKGAHIVMDK
                     VSVGATVTIMCAATLAEGTTIIENAAREPEIVDTANFLVTLGAKIAGQGTDRITIEGV
                     ERLGGGVYRVLPDRIETGTFLVAAAISRGKILCRNAQPDTLDAVLAKLRDAGADIEVG
                     EDWISLDMHGKRPKAVNVRTAPHPAFPTDMQAQFTLLNLVAEGTGFITETVFENRFMH
                     VPELSRMGARAEIESNTVICHGVETLSGAQVMATDLRASASLVLAGCIAEGTTIVDRI
                     YHIDRGYERIEDKLRALGANIERVKGE"
     gene            complement(12674..12928)
                     /gene="ibaG"
                     /locus_tag="MOX77_002969"
     CDS             complement(12674..12928)
                     /gene="ibaG"
                     /locus_tag="MOX77_002969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417657.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family iron metabolism protein IbaG"
                     /protein_id="HCA3358435.1"
                     /translation="MENHEIQSVLMNALSLQEVHVSGDGSHFQVIAVGEMFDGMSRVK
                     KQQTVYGPLMEYIADNRIHAVSIKAYTPAEWARDRKLNGF"
     gene            complement(13116..13412)
                     /gene="mlaB"
                     /locus_tag="MOX77_002970"
     CDS             complement(13116..13412)
                     /gene="mlaB"
                     /locus_tag="MOX77_002970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance protein MlaB"
                     /protein_id="HCA3358436.1"
                     /translation="MTPQLTWTREADTLVLAGELDQDVLAPLWDARVEAMNGVTRIDL
                     SQISRVDTGGLALLAHLVNQAKKQGNAVSLSGVNDKVYALAQLYNLPEDVLPRM"
     gene            complement(13412..14047)
                     /gene="mlaC"
                     /locus_tag="MOX77_002971"
     CDS             complement(13412..14047)
                     /gene="mlaC"
                     /locus_tag="MOX77_002971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid-binding protein MlaC"
                     /protein_id="HCA3358437.1"
                     /translation="MFKRLMMVALLVIAPLSAATAADQSNPYKLMNEAAQKTFDRLKN
                     EQPKIRANPDYLRDVVDQELLPYVQVKYAGALVLGRYYKEATPAQREAYFAAFREYLK
                     QAYGQALAMYHGQTYQIAPEQPLGDATIVPIRVTIIDPNGRPPVRLDFQWRKNTQTGN
                     WQAYDMIAEGVSMITTKQNEWSDLLRTKGIDGLTAQLKSISQQKITLDEKQ"
     gene            complement(14066..14617)
                     /gene="mlaD"
                     /locus_tag="MOX77_002972"
     CDS             complement(14066..14617)
                     /gene="mlaD"
                     /locus_tag="MOX77_002972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipid asymmetry maintenance
                     protein MlaD"
                     /protein_id="HCA3358438.1"
                     /translation="MQTKKNEIWVGVFLLVALLAALFVCLKAANVTSMRTEPTYKVYA
                     TFDNIGGLKVRSPVRIGGVVVGRVEDISLDPKTYLPRVTLDIEERYNHIPDTSSLSIR
                     TSGLLGEQYLALNVGFEDPELGTSILKDGSTIQDTKSAMVLEDMIGQFLYNSKGDDNK
                     NSGDAPAATEGHTEATTPAGETK"
     gene            complement(14622..>14880)
                     /locus_tag="MOX77_002973"
     CDS             complement(14622..>14880)
                     /locus_tag="MOX77_002973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014071945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCA3358439.1"
                     /translation="SWKGIDAGFFWSAMQNAVDWRMDLVNCLIKSVVFAITVTWIALF
                     NGYDAIPTSAGISRATTRTVVHASLAVLGLDFVLTALMFGN"
BASE COUNT         3448 a         4245 c         3642 g         3545 t
ORIGIN      
        1 ccgcagcggc aaggcctgcc tccagcgcgg attccagcat atagccggaa atacgcgtat
       61 ctttaccgat aatgatttta cgcgaaccat gacgcgccag cacttttccg gcagcccaac
      121 ccagtttaag cacgaaatca ggtgtaatgg gggcattgcc tacacgtccg cgaatcccat
      181 cggtaccgaa atatttacga ttactcatag cgtttgtttc cctttgcaga cagagtggct
      241 tccaccaccc gcatcgcctc tacggtttct ttgacgtcat ggacgcgaat gatctgcgcg
      301 ccctgcatcg cagcaattac cgcgcacgca aggctaccgt tcagacggtc tgatggtccc
      361 acgttaagta actgaccaac catcgtttta cgtgacatgc ccaccagcag cggcaggtta
      421 aaatgatgaa actcacccag tcgcgccagt aaggtataat tgtgagagag atttttaccg
      481 aaaccgaatc ctgggtcgag caacaatttc tcttttgcga tgccggcctt ctcacaacgt
      541 gctatttgct caataaagta gcgattcacc tcggcaaaga catcgtcata tttcggcgcc
      601 tcctgcatgg ttttggggtt gccctgcatg tgcataagac tgaccggcaa gccggtttcc
      661 gctgccgctt ccaacgcgcc gggttcggag agtgaacgga catcattgat aatatgcgcg
      721 cccgcccttg ccgcttcacg gatcacctcg ggtttagagg tatccacaga aatccacact
      781 tcaaaacgtt gcgcgattgc ttccagtacc ggaataacgc gatccagctc ttcttccacg
      841 ctcacttctg ccgcgcctgg tcgcgttgat tcccccccac atcaataatt gtcgccccgg
      901 tattcaccat taaattcgca tgtttcaccg cctcaatcag cgtgttatgc gcgccgccgt
      961 cggagaacga atccggcgtt acgttcagga tccccataac atgcggatga gtgagatcga
     1021 gcgtggcgcc ctgagcgaag agtttcatgg tcaaaatccc tgttttattt atggtgagtt
     1081 aaaaaaagaa aaaccccggg gcaagcccca gggtttcggt gagcgctaaa cataatgttg
     1141 taaaacaaat gcttatttgt cgcccagctg ctctgacatc gtgttgcccg ggttcggcgt
     1201 gcgtggttca tcaaccggac gcggcgcctg aggcgtacca ttgctgtcag agttattggt
     1261 gccgtttgga tcttcccagc ccgcaggcgg acgcacttca cgacgcgcca tcaggtcatc
     1321 aatctgcggc gcatcgatgg tttcatattt catcagcgca tctttcatcg cgtgcagaat
     1381 atccatattg tcagtcagga tctgacgagc gcgattgtag ttacgttcaa tcagcgcttt
     1441 cacttcctgg tcgatgatac gcgcagtttc atcagacata tgtttcgctt ttgcgacgct
     1501 acggccgagg aacacttcgc cctcttcttc cgcgtacagc aacggaccga gtttctccga
     1561 gaagccccac tgggtgacca tgttacgcgc caggttagtc gcgactttaa tgtcgttcga
     1621 cgcgccggta gaaacatgct caacgccgta gataatctct tccgccagac ggccgccgta
     1681 cagcgtgctg atttggcttt ccagcttctg acggctggcg ctgatcgcgt cgccttcagg
     1741 caagaagaag gtcacgccca gcgcacgacc acgcgggata atcgtcactt tgtgcaccgg
     1801 atcgtgttcc ggcaccaggc gaccgataat cgcgtggccc gcttcgtggt acgcggtcga
     1861 ctctttctgc gcttccgtca tcaccatgga gcgacgttcg gcgcccatca tgattttgtc
     1921 tttcgctttc tcgaactcaa ccatcgacac tacgcgcttg ttgccgcgtg cggcaaacag
     1981 cgccgcttcg ttgaccaggt tcgccaggtc cgcaccggag aagcccggcg taccgcgcgc
     2041 aatgatcgcc gcatcaatgt ccgtcgctaa cggtacgcga cgcatatgca ccttcagaat
     2101 ctgctcacga ccgcgaacat ccggcaggcc taccaccacc tgacggtcaa aacggccagg
     2161 acgcagcagc gccgggtcaa ggacgtccgg acggttagtt gcggcgataa cgatgatacc
     2221 ttcgttacct tcgaagccgt ccatctcaac cagcatctgg ttcaacgtct gctcacgttc
     2281 atcgtgacca ccgcccagac cagcgccacg ctggcgacct acggcgtcga tttcatcgat
     2341 gaagataatg cacggtgccg ctttcttggc ttgttcgaac atgtcacgca cacgagatgc
     2401 gccgacaccc acgaacattt ccacaaagtc agaaccggaa atcgtaaaga atggcacctt
     2461 cgcttcaccc gcaatggctt ttgccagcag ggttttaccg gtacccggcg ggccgaccat
     2521 caggacgcct ttcggaattt taccgcccag cttctggaaa cggctcggtt cacgcaggta
     2581 ttcaaccagt tccgccactt cttctttcgc ttcgtcacaa cccgcaacgt cagcaaacgt
     2641 ggttttgatc tgatcttccg tcagcatacg cgccttgctc ttaccgaacg acatggcgcc
     2701 tttgccaccg ccgccctgca tctgacgcat gaagaagatc cagacgccga tcagcaacag
     2761 catcgggaac caggagatga agatagaagc cagcaggctt ggctcttcag gtggttcgcc
     2821 aacaaccttg acgtttttag tcagcaggtt atcaagcagc ttcggatcat taatcggaat
     2881 gtaagtcgtg taacggttac tatctttctt ggtaacgttg atctcacgtc cgttgatacg
     2941 cgcttcgcga acctggtcct gattgacctc ttgcaggaag gtagagtaat ccaccttacg
     3001 gccattagac tcgctgggcc caaagctctg gaatactgac atcagcacaa cggcaatgac
     3061 cagccagagt attaggtttt tcgccatgtc actcaaggga ttaacctctt attacaactg
     3121 tgttaaaaac agcgtcagga tactctatat ccagtttctt tcaaacctta cgtctgaaat
     3181 ctgccggtta tcactttcgc ccggtcgcta caatgtacac ttcacgcgaa cgcgcgcgcg
     3241 aagagtccgg cttacgaact ttaaccttcg taaacaggga gcgaatttcc cttagatact
     3301 catcgaaacc ttcgccctgg aacaccttca ctacaaaact tccgcctggc gccagcacat
     3361 cgcggcacat atctaacgcc agctccacca gatacatggc gcgggggata tccaccgccg
     3421 gtgttccgct catgtttggt gccatatccg acatgacaac ttgtacttta ctgtcaccca
     3481 cgcgttccag taacgctttc atgacaagtt catcacgaaa atcgccctga agaaagtcca
     3541 caccaacgat aggatccata ggtaaaagat cacaagcgat gatgcggcct ttgccgccaa
     3601 tctgcgtgac cacatactgt gaccaccctc ctggcgcagc gccgagatcg actaccgtca
     3661 ttcccggctt aaaaagtttg tcactttgct gtatttcatc aagtttaaac caggcacggg
     3721 agcgtagccc ctttttctgc gcctgttgaa catatttatc gctaaagtgt tcctgaagcc
     3781 agcggcttga gctggcagaa cgctttttac ctgtcattta actttcccgt cggggcagtt
     3841 catcgtagcc aatggcgtaa atttctacac gcctatttgg cgatataagg gagatggcgg
     3901 tagaatgacc cgttttcaat cccaacgtaa gcaaaaatat acgatgaatc tgagtactaa
     3961 acaaaaacag cacctaaaag gtctggcaca tccgctcaag cctgttgtta tgcttggcaa
     4021 taatggtttg accgaagggg tactggccga gattgaacaa gcgttagagc accatgaact
     4081 tatcaaggtg aaaatcgcct cggaagatcg cgaaacaaaa accttgatcg tggacgctat
     4141 cgtgcgcgaa accggcgcct gtaacgtaca ggtcatcggt aaaacgctgg tgctgtatcg
     4201 cccaactaaa gagcgtaaaa tctcgctgcc gcgttaagga tatcctaaag tcgaacacaa
     4261 aatctgtgta aaacgagggg ttttccacga gcaggagagc aaaatgccac gctctctccg
     4321 ttgataaaag gccgctatgc ggcctttttc ctttctttac aatacaccaa caatttgcgt
     4381 attgagtact gcttaaaggt attccacttt aagcacttcg tattccacat cgccgccagg
     4441 cgttttgatc accacgacgt catcctgctc tttgccaatc aggccgcgag cgattggcga
     4501 gtttaccgaa atgagatttt gcttaaaatc cgcctcatca tcgccaacaa tacgataggt
     4561 ctgctcttcg tcggtgtcca ggttcagcac cgtgacggta gcgccgaaaa tcacgcgacc
     4621 attgttcggc attttggtga cgtcaatcac ctgcgcattc gacagttttg cttcgatatc
     4681 tttaatgcgc ccttcgcaga aaccctgctg ttcgcgtgca gcatgatact ccgcgttttc
     4741 ttttaaatcg ccatgttcgc gcgcttcggc gatagcggcg atgatttcag gacggcgcac
     4801 agatttcaga aaatccagct cttcgcgcag tttttcggct ccgcgtaagg tcatcggaat
     4861 agcttgcatt tgttatacct cttgaacatt cctgtagggg gcaatgaact ctaccccggc
     4921 tgctaagcca gccccggcat atgccatacc agggtcagaa gcaaaaaaac accaacccgg
     4981 gcgcgcagtc ccaggtcagc tacaatttcc tctttgataa ccattttacc ctggagttcc
     5041 ctatgggtca tcgtttactt tttagggcgt tgcgccgtag tatgacggct tgtttccagg
     5101 gtgttagcgc gagattatgc gattttccag atttatcatc ggattgacca ccagtatagc
     5161 gttcagcgtt caggccgcga atattgacga atacatcaaa cagcttccgg ccggcgccaa
     5221 cctcgcgctg atggtgcaaa agattggcgc gcccgcgccg gctattgatt atcatagtca
     5281 gcagatggcg cttcccgcca gtacccaaaa ggtgattacc gcgctggcgg cgctgattca
     5341 actcggcccg gatttccgtt ttacgaccac gctggagact aaaggcaacg tcgataacgg
     5401 catcctgaaa ggtgacttaa ttgcgcgatt cggtggcgat ccaacgctaa gacgtcagga
     5461 tattcgcaat atggtcgcga cgctgaaaaa gtcaggcgtc acgcaaatcg acggcaatgt
     5521 gcttatcgac acgtcgattt tcgccagcca cgataaagcg ccaggctggc cgtggaacga
     5581 cctgacgcag tgtttcagcg cgcctcccgc cgccgccatt gttgaccgca actgtttttc
     5641 tgtgtcgctt tatagcgcgc aaaaaccaaa cgatttagct tttattcgcg tggcctctta
     5701 ttatccggta acgatgttca gccaggtacg gactctgccg cgcggttcgg cagacgcgca
     5761 gtattgcgag ctggatgttg tgcctggcga tttgaaccgt tatacgctta ccggctgttt
     5821 accacagcgc gccgacccgc tgccgctggc ctttgctatt caggacggcg ccagctacgc
     5881 gggcgcgatc ctcaagcagg aactgaaaga ggccgggata acttaccgcg gcacgctgct
     5941 gcgccagacg caggttaacg agcccggaac gatcgtcgcc agtaaacagt cggcgccact
     6001 gcacgatctg cttaagatta tgctgaaaaa gtcagacaac atgatcgccg atactgtttt
     6061 tcggatgatt ggtcatgtca ggtttaacgt gcctggcacc tggcgggcgg gatcggatgc
     6121 tgttcgccag atcctgcgcc aacaggcggg aattgatatc ggcaatacca ttattgccga
     6181 cggttccggt ctttctcgcc ataacctgat cgctcccgcc acgatgatgc aggtgctgca
     6241 atatatcgcc caacacgata acgagctgaa ctttatctct atgctgccgc tggcgggcta
     6301 tgacggttca ttgcaatacc gcgccggcct acatcaggcg ggcgtagacg gtaaggtttc
     6361 ggcgaaaacc gggtcactgc agggcgtgta caacctggcg ggctttatta ccaccgcaag
     6421 cgggcagcgg atggcatttg tacagtattt gtccggctac gcggttccac ctgccgatca
     6481 gcgtaatcga cgtattccgc tggtacgctt cgagagtcga ttgtacaagg atatttatca
     6541 gaataactga gtgcattatt gccggatggc ggcgctaacg cgtcttatcc ggcctacaaa
     6601 gaacataata aaacgggccg caaatgcggc ccgttggctt ttgtaggccg gataagcgta
     6661 agcgccatcc ggctacgaga ttaacgtttg tagatgaact cgacgccttc ttcgtcgtct
     6721 tcatcccagt cgtcatccca gtcatcgtct gcgtcttctt ccacttcagc caactgctgg
     6781 cgatgataat cgtcccacat gaactcgact ttttccggct gttttgcttc ttcagcctgc
     6841 gcgatcggat tctcgatgat aaaggtcatc acatcccagc agagatcttt cacccctagc
     6901 tgactggcag cggaaatcag atagtatttc ccttcccagc ccaacgcttc ggcgatcgct
     6961 ttcgctttct cttccgcttc ggatttatcc atcagatcga tcttgttgaa cactaaccag
     7021 cgcggtttag ccgccagatc ctggctgtat ttttccagtt cgccaataat gatacgggcg
     7081 ttttccaccg gatcggaacc atcgatcgga tcgatatcaa tgaggtgcag cagtacgcgg
     7141 caacgttcga ggtgcttcaa gaagcgaatc cccaggcccg cgccttccgc cgcgccttcg
     7201 atcaaccccg gaatgtcggc caccacaaaa ctcttttcgc tgtccatacg taccacgccc
     7261 aggctcggca ccagcgtggt aaacggatag tccgcgactt tcggttttgc tgccgatacc
     7321 gcgcgaatga acgttgattt accggcattt ggcatcccca gcatcccgac atccgccagc
     7381 agcatcagtt ccagcagcag gtcgcgctta tcgcccggcg taccattggt tttctggcgc
     7441 ggcgtacggt taaccgagga tttaaaacgg gtattgccta acccatgcca gccgcccttc
     7501 gcgaccaaca gacgctgacc gtgtttggtc atgtcgccca tcgtttcacc ggttccttgg
     7561 tcgataacgc gcgtaccgac cggcactttg atggtcacgt ctttaccgcg tttaccggta
     7621 cagtcgcggc tcgcgccatt ctgaccacgt tcagcgcgga acgatttttc aaagcggtaa
     7681 tcgatcagcg tattcaggtt ttcatcggct tccatccaga cgtcgccgcc gtcgccgcca
     7741 tcaccgccgt ccgggccgcc tttcgggata tatttttcgc ggcggaagct cacacagcca
     7801 ttaccgccat cgcctgcaac gaccagaatc gatgcttcat caacaaactt cattttattc
     7861 tccgtaaatc attcgcctga gcggggttgc gaaaccaccg tttcatgctt gcgtaaaccg
     7921 ccccaaatac gatgaccaat ggcggaatac atcgcgcccg caaccacgac aaacgcaccg
     7981 agataaccta aaaggtttaa catcggtctg gcgaagaaat cgggccaggc catagataaa
     8041 agatctgaaa acagcagggt aaatagcggt gtaagcgtga ttatcgcgct cacctgcgcc
     8101 gcctgccaac gcgccatcgc ttccgccagg gcgccatatc ctaccagcgt atttagcccg
     8161 cagaaaatca aacaggcgag ctgccagtcg ctcagttgcg ctatcaccat cggttttgcc
     8221 aacggcaaaa gcgctatcgt acataaagtg tacagtaaaa acaggatctg ctgcgaggcc
     8281 agacgtcgca ataatacttt ttgcgccacg ccatagctca cccacaccat cgccgcgcct
     8341 acgccaaaaa taacgcccca ggtgtagtcg gtcagtcggg taaaaatctc gatcagactg
     8401 gtgttaaaaa acattaccag cccgctcaat aacatcagcg cgccaatcac ctgcgtaccg
     8461 cgcatctttt ctttcagaat aaagacgctg gcgaccatca tgccaaccgg cgagagctgg
     8521 ccgataacct gcgacgcggt tgggcttaaa tattgcaggg aagaactgaa caaaatgaaa
     8581 ttaccgaaca gtccgcaggt cgctatcgcc aataacacca accagcgcgg cttacgaaaa
     8641 atacgcagcg gcggcagctt tctttttact gccagtatcg ccccgaggcc aatactggcc
     8701 attaagaagc ggtagaagac aatggttgaa ggctccatca cctccagcac ttgcttcatt
     8761 gctattggca acgctcccca gcacatcgcg gtagtgagcg ctaaaagaat gccaatgcct
     8821 gcctgctgct tcatgccgtg ttccctgcaa agacccgtta acggcattca cacagccaca
     8881 cgggtatatt ttagtcggcc atcgaatgta aaaagccccg caacaggtgc ggggctttca
     8941 tccgttaccg gaccacaaaa aacttactca gcaacgatgc tgatgtattt acggtttttc
     9001 gggcctttaa cttcgaattt cactttaccg tctgctttag caaacagagt gtggtcacga
     9061 ccgcaaccaa cgttggtgcc agcgtggaat ttagtaccac gttgacgaac gatgatgctg
     9121 cctgccagaa ctgcttcacc gccaaagcgt tttacgccca gacgtttagc ttcagaatcg
     9181 cgaccgttac gagtcgagcc gccagccttt ttatgtgcca tttaatctgc tcccctaatc
     9241 ttaagcgctg atgccggtaa ttttcacatc agtgaaccac tgacgatggc cctgctgctt
     9301 acggtagtgt ttacggcgac gaaacttaac gattttaact ttctcgccac gaccgtgggc
     9361 aacaacttca gctttgatta cgccgccatc aacgaaagga acgccgattt tgacttcttc
     9421 accgtttgcg atcatcagaa cttcagcgaa ctcgatagtt tcgccagttg cgatgtccag
     9481 cttttccagg cgaacggtct gaccttcgct tactcggtgt tgtttaccac cactttggaa
     9541 aaccgcgtac ataaaaaact ccgcttccgc gcacaccttt caatgattca gagcgcgcta
     9601 taaatattca caatagggcg cgaatattac gcaaattgca cggctttgac aagtgctacc
     9661 atcaatacat gaagaaaaaa aaacacaacg catacggtaa cgtttatctg cggcgttttt
     9721 tcagtacaat cagggtatat ttctaaccat aaaccctacg ttacctcatt cagacatggg
     9781 ataatcggag cgataagccc ggcttttgcg atgaatttag aaaaaatcaa cgagttaacc
     9841 gcgcaagata tggcgggtgt caatgcgaca atccttgaac agcttaattc cgacgttcaa
     9901 ctgattaatc agctaggata ttacattatt agcggcggcg gaaaacgcat tcgtccgatg
     9961 attgccgttc ttgccgcgcg tgcggtgggt tatcagggta acgcgcacgt gactatcgcc
    10021 gctctgatcg agtttatcca cacggcgacg ctgctacatg atgatgtggt ggatgaatct
    10081 gatatgcgtc gcggcaaagc gacggcaaat gccgctttcg gtaatgccgc cagcgtgttg
    10141 gtcggcgact ttatctatac ccgcgccttc cagatgatga ccagcctcgg ctcgttaaaa
    10201 gtgctggaag tgatgtcgga agcggtcaat gtgattgcag aaggcgaagt gctgcaattg
    10261 atgaacgtga atgacccgga cattaccgaa gaaaattaca tgcgggtgat ttacagtaaa
    10321 acggcccgtc tgttcgaagc cgccgcccag tgctccggta ttcttgccgg ttgtacgcct
    10381 gagcaagaga aagggttgca ggactatggc cgctaccttg gtacggcttt ccagctcatt
    10441 gacgatctgc tggattacag tgccgacggc gagcatctcg gtaaaaatgt gggtgatgac
    10501 ctcaatgagg gcaaacctac cttaccgttg cttcacgcca tgcgccacgg tacgccagaa
    10561 cagtcagcga tgatccgtac cgctattgaa caaggtaatg gccgtcatct tctggaaccg
    10621 gttctggaag cgatgaccac ctgcggctcg ctggaatgga cgcgtcagcg agcggaagaa
    10681 gaagccgaca aagcgatatc cgcgttgcag atattgccgg ataccccatg gcgtgaggcg
    10741 ctaatcggtc tcgcacacat cgcggtgcag cgcgatcgtt gatgccattc tcttatcccg
    10801 cgcactgcgc gggatatccc attaagttct aataaactcc agatacccta ttgcctgtct
    10861 tttcgtatat tcatatacgg cttcccctgg catattctga atattgccgc cacttacatg
    10921 aactttttag aacattcctt cacgaagcgt tatagtatcg aacgtcgtcg ggttgttaaa
    10981 accgtaagtg attaatctaa ggagtgatgg atgtatggaa agcaagctta ttgactggca
    11041 tccggccgat atcattgccg gactacgtaa aaaagggact tcaatggccg ctgagtcacg
    11101 ccggaatgga ttgagttcat ccacgctggc caatgcatta acgcgcccgt ggccgaaagg
    11161 agagttgatt atcgcgaaag cattgggaac ggaaccctgg gttatttggc catcgcgtta
    11221 tcacgatccg cgcacgcatg agtttatcga cagaacgcgg cttatgagag cgcgtaataa
    11281 agacaaacag aatgtagagt aagtgcctgt aaaacaaccc ccgcaatcgc gttcgcgggg
    11341 gttattcagc gtacagaagg ttattcgcct ttcacgcgtt caatattcgc gcctagcgcg
    11401 cgcagtttgt cttcgatgcg ctcataaccg cgatcgatgt gataaatgcg atccacaatc
    11461 gtcgtgcctt ccgcaataca gcccgccagc accaggctcg cagatgcccg cagatctgtc
    11521 gccatgacct gggcgccaga gagcgtttct acgccatggc atatgacggt attgctttca
    11581 atttccgcac gcgcgcccat gcggctgagt tcaggcacgt gcataaaacg gttttcaaag
    11641 acggtttcag tgataaagcc cgtcccttcc gccaccaggt tcagcaacgt gaactgcgcc
    11701 tgcatatcgg tcgggaatgc cgggtgcggc gctgtacgga cattgaccgc tttcggtcgt
    11761 ttgccgtgca tgtccagact aatccagtcc tcgcccactt cgatatccgc gccagcatcg
    11821 cgcagtttcg ccagtaccgc gtccagagtg tccggttgcg cgttacggca gaggattttg
    11881 ccgcgagaga tcgctgccgc caccaggaaa gtccccgttt cgatacgatc cggcagcaca
    11941 cgataaacgc cgccgcccag acgctctacg ccctcgatcg taatacgatc ggtgccctgc
    12001 ccggcgatct tcgcccccag cgtaactagg aagttagcgg tgtcgacaat ttccggctcg
    12061 cgcgcggcgt tttcaatgat ggtcgtccct tccgccagcg tagcggcgca cataatggtg
    12121 acggtcgcgc cgacgctgac cttatccatc acgatatgcg cccctttaag acgtccttcg
    12181 acggaggcct ttacgtagcc ctcttctagc ttgatggtcg cacccagttg ttccagaccg
    12241 gtaatatgta gatcaaccgg acgcgcgccg atagtacagc cccccggcag agagacttgt
    12301 ccctgaccaa aacgggcaac cagcggcccc agcgcccata tcgaggcgcg catggtctta
    12361 accagatcat aaggcgcgca gaacacgttc acctggctgg cgtcaatgtg taccgatcca
    12421 ttgcgttcca ctttcgcgcc taattggctc aggagcttca tcgacgtatc cacgtctttc
    12481 agttttggaa cgttttggat ctctaccggt tcttctgcca gcagagcggc gaacaggatc
    12541 ggcagcgcgg cgtttttggc gccggaaatt gtgacttcgc cctggagcgt cgttggcccc
    12601 tgtacacgaa atttatccat tattgtattc tcagttaagc attcatctcc gctaccggca
    12661 ggttacccgt agcttaaaat ccgttaagtt tacgatcgcg cgcccattcc gccggggtat
    12721 atgctttgat cgatacggca tggatacggt tgtccgcaat gtactccatt agcggcccat
    12781 agaccgtttg ctgtttcttg acccggctca tgccgtcaaa catctcgccc acggcaataa
    12841 cctgaaagtg actgccatcg ccggagacgt ggacttcctg gagggagagg gcattcatca
    12901 gcacactctg aatttcatga ttttccatgg gttctttatt cgtcaaatag tgaaaacagc
    12961 ccaacatctt agagcaaagt cgcgccgtct taaataagca aaagattacg ctgataaatc
    13021 agcgcggtaa aagtgccgga tggtgctgct aacgcaattt atccggccta cggggatcat
    13081 gcgaagtgta ggccggataa accatccggc attcattaca tacggggaag tacgtcttca
    13141 ggcaagttat ataattgcgc cagcgcgtaa accttgtcgt taacgccaga cagcgacacg
    13201 gcattgccct gcttttttgc ctggttcaca aggtgcgcca gcagcgccag tccccccgta
    13261 tctaccctgg agatctggct caggtcgata cgggtaacgc cattcatcgc ttctacgcgc
    13321 gcgtcccata gcggcgccaa cacgtcctga tccagctctc ccgccagcac cagagtgtcc
    13381 gcctcacgcg tccaggtgag ttgcggcgtc attactgttt ctcgtccaaa gtaattttct
    13441 gttgagagat agatttcagt tgtgcggtca ggccgtcgat gcctttagta cgcagcagat
    13501 cgctccactc attttgcttg gtggtgatca tgctgacgcc ttccgcaatc atgtcatacg
    13561 cctgccagtt gccggtctga gtgtttttgc gccactggaa atccaggcgt accggcggac
    13621 gaccgttggg atcgataatc gttacacgga taggcacaat ggtcgcatcg cccagcggtt
    13681 gctcaggcgc tatctggtaa gtctggccgt ggtacatcgc cagcgcctga ccgtatgcct
    13741 gtttcaggta ttcgcgaaac gctgcaaaat aggcttcacg ctgcgccggg gtcgcctctt
    13801 tgtagtagcg gcccaacacc agcgcgccgg catattttac ctgcacgtac ggcagaagtt
    13861 cctgatcaac aacgtctcgc aggtaatccg gattggcacg aattttcggc tgttcgtttt
    13921 tcaggcgatc aaaagttttc tgcgccgcct cgttcatcag tttataagga ttgctctgat
    13981 ccgctgccgt tgctgcgctt aatggcgcaa tgaccagcag ggccaccatc atcagtcgtt
    14041 taaacatgcc tcaattctcc tgagattatt tcgtttcgcc cgcgggcgtt gtggcttcag
    14101 tatggccttc cgttgcggct ggcgcatcgc cagaattctt attgtcgtcg cctttgctgt
    14161 tataaaggaa ctggccaatc atatcttcca gcaccattgc agacttggtg tcctgaatcg
    14221 tactcccatc tttgaggata gacgttccca gctcaggatc ttcaaaaccg acgtttaatg
    14281 ccagatattg ctcccccagc agcccggaag tacgaatact caacgagctg gtatcgggaa
    14341 tatggttata acgctcttcg atgtcgagcg ttacgcgcgg caggtatgtt ttcggatcaa
    14401 gcgagatatc ttcaacccgc ccgacaacca ccccgccgat gcgtaccggg gaacgcactt
    14461 tcagaccgcc gatgttatcg aaggtcgcat aaaccttata ggtcggctcc gtgcgcatag
    14521 aggtcacatt tgccgccttc aggcaaacaa acagcgccgc cagcaacgct accagcaaaa
    14581 aaacgcctac ccaaatttca ttttttttcg tttgcatgaa ctcaattccc aaacatcagt
    14641 gcggtcagca caaaatccag ccccagaacg gccaacgatg cgtgaaccac ggtacgcgtc
    14701 gttgcccggc taatcccggc agaagtcggt attgcgtcat aaccgttgaa taacgcaatc
    14761 catgttaccg taatggcgaa caccacgctc tttatcagac agttcaccag gtccatacgc
    14821 cagtcgacgg cattctgcat cgcggaccag aagaacccgg cgtcgattcc cttccagctt
//
LOCUS       DAGWFR010000098        14604 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.100, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000098 DAGWFR010000000
VERSION     DAGWFR010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 14604)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14604)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14604
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.100"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..1729)
                     /locus_tag="MOX77_002974"
     CDS             complement(<1..1729)
                     /locus_tag="MOX77_002974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004203687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HCA3358440.1"
                     /translation="MNEQYSALRSNVSMLGKVLGETIKDALGEHILDRVETIRKLSKS
                     SRAGNEANRQELLTTLQNLSNDELLPVARAFSQFLNLANTAEQYHSISPKGEAASNPE
                     VIAHTLRKLKNQPDLNDATIKKAVESLSLELVLTAHPTEITRRTLIHKMGEINNCLKQ
                     LDNTDIADYERHQVMRRLRQLIAQSWHTDEIRKQRPSPVDEAKWGFAVVENSLWQGVP
                     NYLRELNEQLEENLGYKLPVDFVPVRFTSWMGGDRDGNPNVTAEITRHVLLLSRWKAT
                     DLFLKDIHVLVSELSMVDATPELLALVGEEGASEPYRYLMKKLRARLMATQSWLEARL
                     KGEKLPKPAGLLTQNEQLWEPLYACYQSLQACGMGIIANGELLDTLRRVKCFGVPLVR
                     IDIRQESTRHTEALGEITRYLGIGDYESWSEADKQAFLIRELNSKRPLLPRNWEPSND
                     TREVLETCKVIAEAPKGSIAAYVISMAKTPSDVLAVHLLLKEAGIGFAMPVAPLFETL
                     DDLNNADDVMTQLLNIDWYRGLIQGKQMVMIGYSDSAKDAGVMAASWAQYQAQDALIK
                     TCEKAGIELT"
     gene            complement(2098..3249)
                     /gene="argE"
                     /locus_tag="MOX77_002975"
     CDS             complement(2098..3249)
                     /gene="argE"
                     /locus_tag="MOX77_002975"
                     /EC_number="3.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylornithine deacetylase"
                     /protein_id="HCA3358441.1"
                     /translation="MKNVLPPFIEIYRALIATPSISATEESLDQSNASLITLLAGWFS
                     DLGFNVEVQPVPGTRNKFNMLASTGHGAGGLLLTGHTDTVPFDDGRWTRDPFTLTEHD
                     NKLYGLGTADMKGFFAFILDALRDVDVTKLKKPLYILATADEETSMAGARYFSETTAL
                     RPDCAIIGEPTSLQPIRAHKGHISNVVRVLGQSGHSSDPARGVNAIELMHDAIGHIMQ
                     LRDSLKARYHYEAFTVPYPTLNLGHIHGGDASNRICACCELHMDIRPLPGMTLNDLNG
                     LLNDALAPVSERWPGRLTVAELHPPIPGYECPPDHQLVEVVEKLLGTKTDVVNYCTEA
                     PFMQTLCPTLVLGPGSINQAHQPDEYLETRFIKPTRELITQVVHHFCWH"
     gene            3338..4342
                     /gene="argC"
                     /locus_tag="MOX77_002976"
     CDS             3338..4342
                     /gene="argC"
                     /locus_tag="MOX77_002976"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005122770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HCA3358442.1"
                     /translation="MLNTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKL
                     ISDLHPQLKGIVDLPLQPMSDVRDFSADVDVVFLATAHEVSHDLAPQFLQAGCVVFDL
                     SGAFRVNDRAFYEKYYGFTHQYPELLEQAVYGLAEWNADKLNTANLIAVPGCYPTAAQ
                     LSLKPLIDGGLLDLTQWPVINATSGVSGAGRKAAISNSFCEVSLQPYGVFTHRHQPEI
                     AAHLGAEVIFTPHLGNFPRGILETITCRLKAGVTHAQVADVLQKAYGDKPLVRLYDKG
                     VPALKNVVGLPFCDIGFAVQGEHLIVVATEDNLLKGAAAQAVQCANIRFGFAETQSLI
                     "
     gene            4350..5126
                     /gene="argB"
                     /locus_tag="MOX77_002977"
     CDS             4350..5126
                     /gene="argB"
                     /locus_tag="MOX77_002977"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463002.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HCA3358443.1"
                     /translation="MMNPLIIKLGGVLLDSEEALERLFTALVNYRESHQRPLVIVHGG
                     GCVVDELMKGLNLPVKKKDGLRVTPADQIGIITGALAGTANKTLLAWAKKHHIASVGL
                     FLGDGDSVNVTQLDEALGHVGLAQPGSPKLINMLLENGFLPVVSSIGVTDDGQLMNVN
                     ADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTASKAEQLIDQGIITDGMIVKV
                     NAALDAARALGRPVDIASWRHAEQLPALFNGTPIGTRILA"
     gene            5244..6620
                     /gene="argH"
                     /locus_tag="MOX77_002978"
     CDS             5244..6620
                     /gene="argH"
                     /locus_tag="MOX77_002978"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HCA3358444.1"
                     /translation="MALWGGRFTQAADQRFKQFNDSLRFDYRLAEQDIVGSVAWSKAL
                     VTVGVLTADEQRQLEEALNVLLEEVRANPQQILQSDAEDIHSWVEGKLIDKVGQLGKK
                     LHTGRSRNDQVATDLKLWCKETVMELLTANRQLQSALVETAQANQDAVMPGYTHLQRA
                     QPVTFAHWCLAYVEMLARDESRLQDTLKRLDVSPLGCGALAGTAYEIDREQLAGWLGF
                     TSATRNSLDSVSDRDHVLELLSDAAIGMVHLSRFAEDLIFFNSGEAGFVELSDRVTSG
                     SSLMPQKKNPDALELIRGKCGRVQGALTGMMMTLKGLPLAYNKDMQEDKEGLFDALDI
                     WLDCLHMAALVLDGIQVKRPRCQDAAQQGYANATELADYLVAKGVPFREAHHIVGEAV
                     VEAIRQGKPLEALPLADLQKFSRVIGDDVYPILSLQSCLDKRAAKGGVSPQQVAQAID
                     DAKVRLAL"
     gene            6904..7821
                     /gene="oxyR"
                     /locus_tag="MOX77_002979"
     CDS             6904..7821
                     /gene="oxyR"
                     /locus_tag="MOX77_002979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016831323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator OxyR"
                     /protein_id="HCA3358445.1"
                     /translation="MNIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELG
                     VMLLERTSRKVLFTQAGLLLVDQARTVLREVKVLKEMASQQGETMSGPLHIGLIPTIG
                     PYLLPLIIPMLHQTFPKLEMYLHEAQTHQLLAQLDSGKLDCAILALVKESEAFIEVPL
                     FDEPMMLAIYEDHPWANRDRVPMSDLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTH
                     FRATSLETLRNMVAAGSGITLLPALAVPQERKRDGVVYLPCIKPEPRRTVGLVYRPGS
                     PLRSRYEQLAEAIRGAMDGHFDKALKQAV"
     gene            complement(7804..9204)
                     /gene="sthA"
                     /locus_tag="MOX77_002980"
     CDS             complement(7804..9204)
                     /gene="sthA"
                     /locus_tag="MOX77_002980"
                     /EC_number="1.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Si-specific NAD(P)(+) transhydrogenase"
                     /protein_id="HCA3358446.1"
                     /translation="MPHSWDYDAVVIGSGPGGEGAAMGLVKQGARVAVIERYHNVGGG
                     CTHWGTIPSKALRHAVSRIIEFNQNPLYSDHSRLLRSSFADILNHADNVINQQTRMRQ
                     GFYERNHCEILQGNAHFIDEHTLALECHDGTVETLTAEKFVIACGSRPYHPNDVDFSH
                     PRIYDSDSILSLHHEPRHVIIYGAGVIGCEYASIFRGMDVKVDLINTRDRLLAFLDQE
                     MSDSLSYHFWNSGVVIRHNEEYEKIEGCDDGVIMHLKSGKKLKADCLLYANGRTGNTD
                     SLALENIGLETDSRGQLKVNSMYQTALPHVYAVGDVIGYPSLASAAYDQGRIAAQALV
                     KGEATAHLIEDIPTGIYTIPEISSVGKTEQQLTAMKVPYEVGRAQFKHLARAQIVGMN
                     VGTLKILFHRETKEILGIHCFGERAAEIIHIGQAIMEQKGGGNTIEYFVNTTFNYPTM
                     AEAYRVAALNGLNRLF"
     gene            9403..10038
                     /gene="fabR"
                     /locus_tag="MOX77_002981"
     CDS             9403..10038
                     /gene="fabR"
                     /locus_tag="MOX77_002981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463006.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional repressor FabR"
                     /protein_id="HCA3358447.1"
                     /translation="MMGVRAQQKEKTRRSLVEAAFSQLSAERSFASLSLREVAREAGI
                     APTSFYRHFRDVDELGLTMVDESGLMLRQLMRQARQRIAKGGSVIRTSVSTFMEFIGN
                     NPNAFRLLLRERSGTSAAFRAAVAREIQHFIAELADYLELENHMPRAFTEAQAEAMVT
                     IVFSAGAEALDIGAEQRRQLEERLVLQLRMIAKGAYYWYRREQEKIAHHSE"
     gene            10054..10413
                     /locus_tag="MOX77_002982"
     CDS             10054..10413
                     /locus_tag="MOX77_002982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YijD family membrane protein"
                     /protein_id="HCA3358448.1"
                     /translation="MKQSGQDKGTLLLALIAGLSINGTFAALFSAIVPFSVFPVISLV
                     LTVYCLHQRYQNRTMPVGLPGLAAACFILGVLLYSTVVRAEYPDIGSNFFPAVLSVIL
                     VFWIGFKLRNRKQDTAE"
     gene            complement(10460..11560)
                     /gene="trmA"
                     /locus_tag="MOX77_002983"
     CDS             complement(10460..11560)
                     /gene="trmA"
                     /locus_tag="MOX77_002983"
                     /EC_number="2.1.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (uridine(54)-C5)-methyltransferase TrmA"
                     /protein_id="HCA3358449.1"
                     /translation="MTPEHLPTEQYEAQLAEKVARLQSMMAPFSGLVPEVFRSPVSHY
                     RMRAEFRLWHDGDNLYHIMFDQQTKSRIRVDTFPAASQLINTLMKAMIAGVRDNHALR
                     HKLFQIDYLTTLSNQAVVSLLYHKKLDEEWREAATALRDALRAQGLNVHLIGRATKTK
                     IELDQDYIDERLPVAGKEIIYRQVENSFTQPNAAMNIQMLEWALEVTKDSKGDLLELY
                     CGNGNFSLALARNFNRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNG
                     VREFNRLQGIDLKRYQCETIFVDPPRSGLDSETEKMVQAYPRILYISCNPETLCKNLE
                     TLSQTHTVSRLALFDQFPYTHHMECGVLLTAR"
     regulatory      11675..11868
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            11934..13778
                     /gene="btuB"
                     /locus_tag="MOX77_002984"
     CDS             11934..13778
                     /gene="btuB"
                     /locus_tag="MOX77_002984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent vitamin B12 receptor BtuB"
                     /protein_id="HCA3358450.1"
                     /translation="MIKKATLLTAFSVTAFSAWAQDTSPDTLVVTANRFQQPRSAVLA
                     PVTIVTRQDIERWQSTSVNDVLRRLPGVDIAQSGGTGQNSSIFIRGTNSSHVLVLIDG
                     VRLNLAGVSGSADLSQFPVSLVQRIEYIRGPRSAIYGSDAIGGVVNIITTRDNPGTEL
                     TAGWGSNSYQNYDLSTQQQLGENTRATLIGDYEYTKGFDVVAKGGTGMQAQPDRDGFL
                     SKTLYGALEHTFSDRWSGFVRGYGYDNRTDYDAYYSPGSPLIDTRKLYSQSWDAGLRF
                     NGERIQSQLVSSYSHSKDYNYDPHYGRYDTSATLDEMKQYNVQWTNSVVVGHGNVGAG
                     VDWQKQTTTPGTGYVPEGYDQRNTGVYLTGLQQLGDFTLEAAARSDDNSQFGRHGTWQ
                     TSAGWEFIEGYRFIASYGTSYKAPNLGQLYGYYGNPNLNPEKSKQWEGAFEGLTAGVS
                     WRISGYRNDINDMIDYDDHLQKYYNEGKARIKGIEATANFDTGPLTHTVSYDYVDARN
                     AITDTPLPRRSKQMAKYQLDWDVYDFDWGVTYQYLGSRYDSDYSAYPYRTVKMGGVSL
                     WDLTVAYPVTSHLTVRGKIANLFDKDYETVYGYQTAGREYTLSGSYTF"
     gene            13723..14574
                     /gene="murI"
                     /locus_tag="MOX77_002985"
     CDS             13723..14574
                     /gene="murI"
                     /locus_tag="MOX77_002985"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HCA3358451.1"
                     /translation="MATKLQDENTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRRLL
                     PDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRYPLSLAVIACNTASTVSLPA
                     LREKFAFPVVGVVPAIKPAARLTANGVVGLLATRATVKRPYTHELIARFANECQIAML
                     GSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEPPDTVVLGCTHFPLLRDELLQVL
                     PEGTRLVDSGAAIARRTAWLLEHEAPDAKSTDANIAYCMAMTPGAEQLLPVLQRYGFE
                     TLEKLAV"
BASE COUNT         3284 a         3685 c         4135 g         3500 t
ORIGIN      
        1 gagtgagctc gatgccggct ttttcacagg ttttgatcag ggcgtcctgc gcctgatact
       61 gcgcccatga cgcggccata acgccggcgt cttttgccga gtcggagtag ccgatcatga
      121 ccatctgctt accctgaatc agcccgcgat accagtcgat attcaacaac tgggtcatca
      181 cgtcgtcggc attgttcagg tcgtcgaggg tttcaaacag cggtgcgacc ggcatggcaa
      241 agccgatacc tgcctctttc agcagcaaat gcacagccag cacatcagac ggcgttttcg
      301 ccatagaaat cacgtaggcg gcgatcgacc cttttggcgc ttcggcaata accttgcagg
      361 tttcaagcac ttcgcgggta tcgttgctcg gctcccagtt acgcggcagc agcggacgtt
      421 tggagttcag ctcgcggatc aggaaggcct gcttgtcggc ttccgaccag ctttcgtagt
      481 cgccaatacc gaggtagcgg gtaatttcgc ccagcgcttc ggtatggcgg gtgctctcct
      541 gacggatatc aatacgcacc agcggtacgc cgaaacactt cacgcggcgg agcgtgtcga
      601 gtaactcgcc gttggcgata atgcccatgc cacaggcctg taacgactgg tagcaggcgt
      661 acagaggttc ccagagctgc tcgttttgcg tcagcaggcc agccggtttg ggcagcttct
      721 cgcctttcag acgcgcttcc agccaggact gggtcgccat cagacgggcg cgcaattttt
      781 tcatcaggta gcgatacggc tcagacgcgc cttcttcgcc cactaacgcc agcagctccg
      841 gcgtggcgtc gaccatcgac agttctgata ccaggacatg aatgtctttc aggaacagat
      901 cggtggcttt ccagcggctt aacaagagta cgtggcgggt gatctccgcc gtcacgttcg
      961 ggttgccgtc tcggtcgccg cccatccagg aggtaaaacg taccggcaca aaatccaccg
     1021 gcaatttgta gccgagattt tcttccagtt gttcattcag ttcacgcaga tagttaggta
     1081 cgccctgcca caggctgttc tcaaccacgg cgaagcccca tttggcttca tccaccgggc
     1141 ttgggcgctg cttgcggatc tcatccgtat gccaggattg ggcaatcaac tggcgcaggc
     1201 gacgcatcac ctggtggcgt tcgtagtcgg cgatatcggt attatcaagc tgtttcagac
     1261 agttattgat ttcccccatc ttgtgaataa gcgtacggcg ggtaatttct gtcgggtggg
     1321 cggttagcac caactccaaa gacagcgact ctaccgcttt tttgatggtt gcgtcgttga
     1381 ggtccggttg gtttttcagt ttacgcagag tgtgggcaat cacttccggg ttgctggcgg
     1441 cttcgccttt tggcgaaatg ctgtggtatt gctcggcagt attggccagg ttcaggaact
     1501 gactaaacgc gcgcgcaact ggcagcagct cgtcattaga caaattttgt agcgtggtga
     1561 gcagctcctg gcgattagct tcattgccgg cgcgtgaaga tttggatagc ttacggattg
     1621 tttctacgcg atcaagaatg tgctctccca gcgcatcctt gatggtttct cccagcacct
     1681 tgccgagcat actgacatta ctacgcaacg cggaatattg ttcgttcata tgaccccaga
     1741 caccccatct ttaatgtaat tgccctgtct ctttcatgcc acagcggcag tggctgcgct
     1801 cgcccgtatg ctagttctgc ggaatgggct cgtttgccgc cttgctgtga cgtgaaattt
     1861 ttctgacttt gctttttagc cgtcttttat aaagccacgt aaaacccgtg gcgtcaatta
     1921 ctgcgaaatc ggttcagcaa acgaaaaaat ggcggtaatt tattaaagtt aattcgcatc
     1981 gtgccaaata agaaatgctt atgaacatgt ggcgtagaga tgccggatgg cgctgcgctt
     2041 atgcggccta caagacgggg gaggcccggt aaacatcgtg tcaccgggca atatgcatta
     2101 atgccagcaa aaatggtgta ctacctgggt aatcaattcc cgggttggct taataaaacg
     2161 cgtttcgaga tattcatccg gctgatgcgc ctgattaatt gagcccggac caagcaccag
     2221 cgttgggcat aatgtctgca taaacggcgc ttcagtacag tagttcacca cgtcggtttt
     2281 tgttcccaac agtttttcta ctacttcaac cagttggtgg tccggtggac actcgtaacc
     2341 tggaatcggc ggatgtaatt ccgccaccgt caggcggccc ggccagcgtt cgcttaccgg
     2401 agccagcgcg tcgttaagca gtccattaag gtcgtttaac gtcatgcccg gcagtggacg
     2461 aatatccata tgcaattcgc agcaggcgca gatacggttt gaggcatcgc cgccgtggat
     2521 atggcccaga ttcagcgttg gatacggaac ggtaaacgcc tcgtagtgat accgcgcttt
     2581 cagcgagtca cgcagttgca tgatatggcc aatcgcatcg tgcatcagtt caatggcgtt
     2641 aaccccacgc gccgggtcgc tggaatgacc ggactgcccc aggacgcgaa cgacattaga
     2701 gatatgccct ttgtgcgcgc gtatcggttg caacgacgtc ggttcgccaa tgatcgcgca
     2761 gtccggacgt aatgccgtgg tttcggaaaa ataacgcgcc cccgccatgc tggtctcttc
     2821 atcggcggtc gccagaatgt agagcggctt tttcaacttt gtgacgtcaa cgtcacgtag
     2881 cgcgtccaga ataaaagcga agaagccttt catatccgca gtgcccagac catagagctt
     2941 attgtcgtgc tcggtcagcg tgaacgggtc gcgcgtccag cgtccgtcat caaagggaac
     3001 tgtgtcggta tggccggtca gcagcaaacc gcccgcgcca tgtccggtgc tggcgagcat
     3061 attaaatttg tttcgcgttc ctggaaccgg ttgaacctct acgttgaaac caagatcgct
     3121 gaaccagcct gcaagcaaag tgattaaaga cgcattactt tgatccaggg attcttcggt
     3181 tgcgcttatc gacggtgtgg caatcagagc gcggtaaatc tcgataaatg gcggtaaaac
     3241 gtttttcatt gttgacacac ctcaggtcat gatagtatca atattcatgc attaattatg
     3301 aataaaaata cattaacgtt gagcataaag gaacccgatg ttgaatacgc tgattgtagg
     3361 cgctagcggt tatgcgggcg cagagcttgt aagctacgta aatcgccacc cacatatgac
     3421 cataaccgct ttgaccgtct cagcgcaaag caatgatgca ggaaagttaa tttctgattt
     3481 acatccgcag ttaaaaggga ttgttgacct gccattgcaa ccgatgtcgg atgtacgtga
     3541 ctttagcgca gatgttgatg tggtgttcct ggcgacagcg catgaagtga gccacgatct
     3601 ggcgccgcag tttttacagg ccggatgcgt cgtattcgat ctttccggcg cgtttcgggt
     3661 aaacgatcgc gccttctatg aaaagtatta cggatttact catcagtatc ctgagctgct
     3721 ggagcaggcg gtgtacggtc tggcggagtg gaatgccgat aaactgaaca cggcgaatct
     3781 gattgcggtt cctggttgct atccaaccgc agcgcagttg tcgctaaaac cgctgattga
     3841 cggcgggctt ctcgatctga cgcagtggcc ggtaattaat gccaccagcg gggtgagcgg
     3901 cgcggggcgc aaggcggcaa tatcgaacag tttctgtgaa gtgagtttgc aaccgtatgg
     3961 tgtgtttacg catcgtcatc agccggaaat cgctgcccat ctgggcgcgg aggtcatctt
     4021 caccccgcat ctggggaatt tcccgcgcgg gattctggaa accattacct gccgcctgaa
     4081 agcgggagta acccatgcgc aggtcgccga cgtgttgcaa aaagcctatg gcgacaaacc
     4141 gctggtgcgc ctgtatgaca aaggcgttcc ggcgttaaag aacgtcgtcg ggctgccgtt
     4201 ctgcgatatt ggttttgccg tccagggcga acatctgatt gtggtggcaa ccgaagacaa
     4261 cttgttgaaa ggcgcagcgg cgcaggcggt gcagtgcgct aatattcgtt ttggcttcgc
     4321 tgaaacgcag tctcttattt aagggtgaaa tgatgaatcc attaattatc aagctgggtg
     4381 gcgtattact ggatagcgaa gaggctctgg aacgtctttt taccgcgctg gtcaactatc
     4441 gtgagtccca tcagcgtccg ctggtgattg ttcacggcgg cggttgcgtg gtggatgagc
     4501 tgatgaaagg gcttaatttg ccagtgaaaa agaaagacgg cctgcgcgtg acgcctgccg
     4561 atcagattgg catcattacc ggtgcgctgg cgggaaccgc taacaaaact ctgctggctt
     4621 gggcgaagaa acaccatatc gcctctgttg gtctgtttct gggcgatggc gacagcgtaa
     4681 acgtgaccca actcgatgaa gcgttaggcc acgtcgggct ggcgcaaccg gggtcgccga
     4741 agctgattaa catgttgctg gaaaacggct ttctgccggt ggtcagctcc attggcgtaa
     4801 cagacgacgg ccaactgatg aacgtcaacg ccgatcaggc ggcaaccgcg ctggcggcga
     4861 cgctgggggc cgatctgatc ctgctttctg acgtgagcgg tattctggac ggcaaaggcc
     4921 agcgtatcgc cgaaatgacg gcgtccaaag ccgaacagct tatcgaccag ggcattatta
     4981 ccgacgggat gattgtgaaa gtgaatgcgg ctctcgatgc tgcgcgggcg ctgggtcgtc
     5041 cggtggatat tgcttcctgg cgtcatgcgg aacaattgcc ggcgctgttt aacggcacgc
     5101 cgattggcac gcgtattctg gcttaactat ttgttcgccc gatggcggct gcgccttatc
     5161 gggcctacgt gaacagaaat tgtaagccgg ataagcgtag cgctatccgg cagtgaaatt
     5221 cgaagaattt aaggaagtct attatggcac tttggggtgg gcgttttaca caggcggcag
     5281 accaacggtt taaacaattc aatgattcgt tgcgcttcga ttaccgtctg gcggagcagg
     5341 atattgtcgg ttctgtggcc tggtccaaag cattggtcac ggtaggcgta ctgactgccg
     5401 atgagcaacg acagttggaa gaagcgctga acgtgctgct ggaagaggtt cgcgcgaatc
     5461 cgcagcaaat cctgcaaagc gatgcggaag atatccatag ctgggtggaa ggtaagctca
     5521 tcgacaaagt gggtcagttg ggtaaaaagc tgcacaccgg gcgcagccgt aacgatcagg
     5581 tggcgacgga cctgaaactg tggtgcaaag agacggtgat ggaactgctc accgctaacc
     5641 gccagctaca gagcgcgctg gtggaaaccg cgcaggcgaa ccaggacgcg gtaatgccgg
     5701 gatataccca tctgcaacgc gcgcagccag tgactttcgc ccactggtgt ctcgcgtatg
     5761 tcgaaatgct ggcgcgcgat gaaagccgcc tgcaggacac gcttaaacgt ctggacgtga
     5821 gtccgctagg ctgcggcgcg ttggcgggaa cggcctatga aattgaccgt gaacaattgg
     5881 caggctggct gggcttcacg tctgcgaccc gcaacagcct ggacagcgtg tccgatcgtg
     5941 accacgtact ggaactgctt tctgatgcgg ctatcggcat ggtgcatctg tcacgtttcg
     6001 cggaagatct gattttcttt aattctggtg aagcgggctt tgtagagctt tctgaccgcg
     6061 tgacttccgg ttcatcgtta atgccgcaga agaaaaaccc ggacgcgctg gagctgattc
     6121 gcggtaagtg cggtcgcgta caaggggcgc taaccggcat gatgatgact ttaaaaggtc
     6181 tgccgctggc gtataacaaa gatatgcagg aagacaaaga agggctgttc gatgcgctcg
     6241 atatctggct tgactgcctg catatggcgg cgttggtgct ggacggtatt caggtgaaac
     6301 gcccacgttg tcaggacgcg gcgcaacagg ggtatgccaa cgccaccgag ctggcggatt
     6361 acctggtcgc gaaaggcgtg ccgttccgcg aagcgcacca tattgtcggc gaagctgtgg
     6421 tagaagctat tcgccagggt aagccgctgg aagcgttgcc gctggccgat ttacagaaat
     6481 tcagccgcgt gattggcgac gatgtgtatc cgatattgtc tttgcagtcg tgtctggata
     6541 aacgggcggc aaaaggcggc gtttctccgc agcaggtggc gcaggccatc gacgatgcga
     6601 aggtgcgcct cgcgttgtag gccttataag cgtagcgcca tcaggtaata ctgcccggcc
     6661 gagcatcagc gacgccgggc ttttttacgc aaaaaaaagc ggaccagagg tccgcaaaag
     6721 ttcacgttgg ctttagttat ttcgggttcg agagataccc tctgaacggg cggtgtcttc
     6781 aagggttaaa cgagaaaccg ctccgttctg tgatgtatta ttaatcagaa aggttgatag
     6841 ggataatcgt tcgttgctat gctacctatc gccatgaact atcgtggcga cggaggatga
     6901 ataatgaata ttcgtgatct tgaatatctg gtggcgttag ccgaacatcg ccatttccgg
     6961 cgagcggcgg actcctgtca cgtcagccag ccaaccctta gtgggcaaat acgtaagctg
     7021 gaagatgagc tgggcgttat gctgctggag cgtacgagcc gtaaggtgct gtttacccag
     7081 gcgggcttac tgctggtgga tcaggcgcgt accgtactgc gtgaggtcaa ggtgctcaag
     7141 gagatggcaa gccaacaagg cgagacgatg tccggcccgc tgcatattgg tttaatccca
     7201 acaattggtc cctatttgct gccgcttatc attccaatgt tgcaccagac tttcccgaag
     7261 ctggaaatgt atctgcatga ggcgcaaacg caccagctgt tagcgcaact cgatagcggc
     7321 aagcttgact gcgctattct ggcgctggtg aaagagagcg aggcgtttat cgaagtgccg
     7381 ctgtttgatg agcccatgat gctggctatt tatgaagatc atccgtgggc gaatcgcgat
     7441 cgcgtgccga tgtccgatct ggcgggcgag aaattgctga tgctggaaga tggccactgt
     7501 ctgcgcgatc aggcgatggg gttctgtttt gaagcgggag cggatgaaga tacccatttc
     7561 cgggcgacca gtctggaaac gctgcgcaac atggtggcgg cgggcagtgg tattacacta
     7621 ctccccgcgc tggccgtacc gcaggagcgt aagcgcgacg gcgtggttta tctgccatgc
     7681 attaagccgg agccgcgtcg taccgtgggg ctggtttatc gcccgggatc gccgctgcgt
     7741 agccgttatg agcaactggc agaggccatc cgtggcgcaa tggatggaca tttcgacaag
     7801 gcgttaaaac aggcggttta agccgttcaa cgccgcaacc cgataagctt ccgccatggt
     7861 tgggtagtta aaggtggtgt taacgaagta ttcgatggtg ttaccgccac ctttctgctc
     7921 catgatcgcc tggccgatat gaataatttc ggcggcgcgt tcgccaaagc agtgaatccc
     7981 cagaatttct ttggtttcgc ggtgaaagag aatttttagc gtgccgacgt tcatgccgac
     8041 gatttgcgct cgcgccagat gcttaaactg cgcgcggccc acttcgtaag gcactttcat
     8101 tgccgttaac tgctgctcgg ttttgccgac agaactgatt tccggaatgg tataaatccc
     8161 ggtggggata tcttcgataa gatgcgcggt cgcttcgcct ttcaccagcg cctgcgctgc
     8221 aatacgcccc tgatcgtagg cggcggaggc cagactggga tagccaatca cgtcgcccac
     8281 cgcatagacg tgcggcaggg cggtctggta catactgttg actttgagct gtccacggct
     8341 gtctgtttcc agaccaatat tctccagcgc cagcgaatcg gtgttaccgg tacggccatt
     8401 agcatagagc aggcagtcag ccttcagttt tttgccggat ttcaggtgca tgatgacgcc
     8461 atcatcgcag ccttcgattt tctcatactc ttcattgtgg cgaataacca cgccgctatt
     8521 ccagaaatgg taagagagag agtcggacat ctcctgatcg agaaaggcca gcaggcgatc
     8581 gcgggtgttg atcagatcca ctttcacatc cataccgcgg aatatggacg catattcgca
     8641 gccgataacg cctgcgccgt aaataataac gtggcgcggt tcatggtgga gactcaggat
     8701 tgagtcgctg tcataaatgc gcggatgcga gaaatccaca tcattgggat ggtaaggacg
     8761 cgaaccacag gcaataacaa atttttctgc cgtcagggtt tcaaccgtgc cgtcatggca
     8821 ttccagcgcc agggtatgtt cgtcaataaa atgggcgttg ccctgcaaga tttcacagtg
     8881 gttacgctca taaaacccct gacgcatacg cgtttgttga ttaatcacgt tatcggcatg
     8941 attaaggata tcggcgaaag aagaacgaag gagacgggag tggtcgctat agagcgggtt
     9001 ttgattaaat tcaataatgc ggctgacggc gtggcgaagg gctttggatg gaatggtgcc
     9061 ccagtgggta catccgccgc caacgttatg ataacgctca atcaccgcga cgcgtgctcc
     9121 ttgcttaacc agacccattg cagcgccttc accgccgggg cctgacccta tgacgactgc
     9181 atcataatcc caggaatgtg gcatggtatt actcacctgt ttttatacat aaaataaaca
     9241 cgatgataac atttgcccag ctttaaccca attatcgttg tgcttttttg cgaagccgga
     9301 gcacaaactg tctgtaaaca atcattcaca atccagtgtg aacccgttac ttttattctc
     9361 tggtatagtg ccgaataagg catatggaag gattcagaca ttgtgatggg tgttagagcg
     9421 caacaaaaag aaaaaacccg gcgttcgctg gtggaagccg cattcagcca actgagcgct
     9481 gagcgaagtt tcgccagcct gagtttgcgt gaggtggcgc gtgaagcggg cattgcgcca
     9541 acgtcgtttt accgtcattt tcgcgatgtc gatgaactcg gtctaacgat ggtggatgaa
     9601 agcggtctga tgctgcgtca gttgatgcgt caggcgcgac agcgtatcgc gaaaggcggc
     9661 agcgtcattc gcacgtcggt ctctacattt atggagttta tcggcaacaa tcccaacgcc
     9721 ttccgtctgt tgttgcgcga gcgttccggc acttccgcgg cgtttcgtgc cgccgtcgcg
     9781 cgggagattc agcattttat tgcggaactt gccgactatc tggaactcga aaaccatatg
     9841 ccgcgcgcgt ttactgaagc ccaggccgaa gcgatggtga ctattgtctt tagcgcgggc
     9901 gcagaggcgt tggacatcgg cgctgaacag cgtcggcaat tagaagagcg gctggtattg
     9961 caactgcgca tgattgcgaa aggggcgtat tactggtatc gccgtgagca agagaaaata
    10021 gcacatcatt ccgaataacg tgaaggacga gtaatgaaac agtcaggtca agataaaggt
    10081 acgctgttgc tggcgctcat cgctggctta tcgattaacg gcacattcgc ggcgctgttt
    10141 agcgctattg tgccgttctc cgtattcccg gttatctcgc tggtactgac ggtatattgc
    10201 ctgcatcagc gctaccaaaa tcgtactatg ccggtaggtt tgccggggtt ggccgccgct
    10261 tgtttcattc ttggcgtttt actgtatagc actgtcgtgc gtgcagaata tccggatatc
    10321 ggctctaatt tcttcccggc ggtgctgtcg gtgattctgg tattctggat tggctttaag
    10381 ctgcgtaacc gcaagcagga caccgcggag tagtgtgcga atgccggatg gcggtataac
    10441 cggccatccg acgtacattt taccttgcgg tgagtaatac cccgcattcc atatgatgcg
    10501 tatacgggaa ctgatcgaat agcgccaggc gagacaccgt gtgcgtctgg cttaacgttt
    10561 ccaggttttt gcacaacgtt tccggattgc aggaaatgta cagaatacgt ggataagcct
    10621 gcaccatttt ttctgtttcg ctgtccagac cgctgcgcgg cggatcgaca aaaatggttt
    10681 cgcactgata gcgcttcagg tcgatcccct gcaggcggtt aaactcacga acgccgttca
    10741 tcgcctgggt aaactcttcc gccgccatgc gaataatttg cacattatca atatgattag
    10801 cggcaatatt gtactgtgcg gcagcgacgg acggtttggc gatttcggtt gccagcacgc
    10861 ggttaaaatt gcgcgccagc gctaaagaaa aattgccgtt gccgcaatac aactcaagca
    10921 gatcgccttt tgagtctttc gtcacctcca gcgcccactc taacatctga atattcatgg
    10981 cggcgtttgg ctgcgtaaag ctgttttcga cctggcggta gatgatctct ttacctgcca
    11041 caggcagacg ctcatcaata taatcctgat ccaattcgat cttggtttta gtagcccggc
    11101 caatcaggtg tacgttcaga ccttgcgcgc gtaaagcatc gcgtaacgca gtggcggctt
    11161 cacgccactc ttcgtccagc ttcttatggt acagcaacga cactaccgcc tggttgctca
    11221 aggtcgtgag ataatcgatc tggaacagct tatgccgcag tgcatgatta tcgcgcacgc
    11281 cggcaatcat cgccttcatt aaggtattaa tcagttggct ggccgccggg aaggtgtcaa
    11341 cgcgaatccg gcttttggtc tgctgatcaa acataatgtg gtacaggtta tcgccgtcat
    11401 gccacaggcg aaattccgca cgcatacgat agtgactgac cggcgagcga aatacttccg
    11461 gaaccaggcc agaaaacggc gccatcatac tctgcaagcg cgccactttt tcggccagct
    11521 gcgcctcata ctgttctgtc ggaagatgtt cgggggtcat atcgcatcct gaataataaa
    11581 agtacgcggg gattgtaggg attgctcagt ggatgtccag ctattgatga tttctgattt
    11641 gtgatgcgcg gtctggacag ggtgttgtga cagacggtag catccgtggg ccggtcctgt
    11701 gagttaatag ggaatccagt gaaaatctgg agctgacgcg cagcggtaag gaaaggtgag
    11761 atgagagcgt aagcagacac tgcctccggc gggaagtcat catttctgct atccagtcaa
    11821 cggataaccc tccaagcccg aagacctgcc ggctaacgtc gcatctggtt tttcatcatc
    11881 gcgtactatc gatgaagcct gcggcatcct tcttatattg tggatgcttt acaatgatta
    11941 aaaaagctac gctgctgacg gcgttctccg tcacggcctt ttcagcttgg gcgcaggaca
    12001 ctagcccgga tacactggtt gtcaccgcca accgttttca gcagccgcgc agcgcggttc
    12061 tggcgcccgt taccatcgtg acgcgtcagg atattgaacg ctggcaatcg acctccgtaa
    12121 atgatgttct acgccgtttg cctggcgtcg atattgcgca gagcggcggc accggacaaa
    12181 actcctccat tttcattcgc ggcaccaact ccagccatgt actggtattg attgacggcg
    12241 tgcgtctgaa tttagcaggc gtgagcgggt ccgccgatct cagccagttc ccggtgtcgc
    12301 tggtacagcg cattgaatat attcgcggtc cgcgttccgc tatttatggt tccgatgcta
    12361 tcggcggcgt agtgaatatc attacgacgc gcgataaccc aggcacagaa ttaaccgctg
    12421 gatggggaag caatagctac cagaattacg acctctcgac gcaacagcaa cttggcgaaa
    12481 acacgcgggc gacgttgatc ggcgattacg aatacaccaa agggtttgac gtggtagcga
    12541 aaggcggtac cgggatgcag gcgcagcctg accgggacgg ctttttgagt aaaacgcttt
    12601 atggcgcgtt agagcatacc ttttctgatc gctggagcgg attcgtgcgt ggttatggct
    12661 acgataaccg taccgattac gacgcctatt actcgccggg ctcgccgctg attgatacac
    12721 gcaaacttta tagccaaagc tgggacgccg ggctgcgctt taatggcgaa cgtattcagt
    12781 ctcagctagt ttcaagctat agccacagta aagattacaa ctatgatccg cactatggtc
    12841 ggtatgatac ctccgccacg ctggatgaga tgaaacagta caatgttcaa tggaccaaca
    12901 gtgtggttgt ggggcacggt aatgttgggg cgggcgtaga ctggcagaaa cagactacca
    12961 cgccaggtac cggctatgtg cccgagggat atgaccagcg taataccggg gtttacctga
    13021 caggattaca acagttgggt gacttcaccc tggaagcggc ggcgcgcagt gatgacaact
    13081 cccagtttgg tcgtcacggt acatggcaaa ccagcgcggg atgggagttt atagaaggtt
    13141 atcgctttat tgcctcctac ggaacctcct acaaagcgcc taatttgggc cagctgtatg
    13201 ggtattacgg taatccgaac ctgaatcctg aaaagagtaa acagtgggaa ggcgcatttg
    13261 aagggctcac cgctggcgtc agctggcgta tttcaggtta tcgtaacgat attaatgaca
    13321 tgatcgatta tgacgatcat ctgcaaaaat attacaacga aggtaaggcg cgtattaaag
    13381 gtattgaggc gacggcgaat ttcgataccg gaccgttaac gcatacggtc agttatgatt
    13441 acgttgatgc gcgtaatgcg attaccgata cgccattacc ccggcgttcc aaacagatgg
    13501 caaaatatca acttgactgg gacgtttacg attttgactg gggggtgaca tatcaatacc
    13561 ttggttcccg ctatgattcg gattactccg cttacccata ccggacagta aaaatgggcg
    13621 gcgtcagttt atgggatctt acggttgcat atccggtcac ctcacatctg acagttcgtg
    13681 gtaaaatagc caacctgttc gacaaagatt acgagacagt ttatggctac caaactgcag
    13741 gacgagaata caccttgtct ggcagctaca ccttctgaac cacgtcccac cgtgctggta
    13801 tttgattccg gcgtcggtgg attgtcggtc tatgatgaga ttcggcggct cctgccggat
    13861 ctccactata tatatgcttt cgataacgtg gctttcccct acggggaaaa gagcgaaacg
    13921 tttatcgttg agcgcgttgt cgagattgtg actgcggtac agcagcgcta tcccctttca
    13981 ctggcggtga ttgcctgtaa taccgccagt acggtctcac ttcccgcatt acgtgaaaag
    14041 tttgccttcc cggtggtggg cgttgtgcct gcgattaaac cagcggcgcg gcttaccgcc
    14101 aatggcgtcg tcgggctact ggcgacgaga gccacggtca aacgtcctta tactcacgag
    14161 ctgattgcgc gcttcgccaa tgaatgtcag atagcgatgt tggggtcggc agaactggtg
    14221 gaactggcgg aagctaaatt acatggcgat tcggtatcgc tggaagaact gcgccgtata
    14281 ttacgcccat ggctacgaat gccggagccg cctgacacgg tcgttctggg gtgtacgcat
    14341 ttccctctat tacgggacga gcttttgcaa gtcctgcccg aagggacgcg gttagtggat
    14401 tccggcgcgg cgatagcgcg tcgtacagcc tggctgttgg aacatgaagc gccggatgcg
    14461 aaatcaaccg atgccaatat tgcttattgc atggcaatga cgccaggagc tgaacaatta
    14521 ttacccgttt tacagcgtta tggctttgaa acgctcgaaa aactggcggt ttaatggcgt
    14581 tttgggtaaa taccaggcac ttga
//
LOCUS       DAGWFR010000099        14603 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.101, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000099 DAGWFR010000000
VERSION     DAGWFR010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 14603)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14603)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14603
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.101"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..377)
                     /locus_tag="MOX77_002986"
     CDS             complement(<1..377)
                     /locus_tag="MOX77_002986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil permease"
                     /protein_id="HCA3358452.1"
                     /translation="MTRRAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLFHINPA
                     TVLLFNGIGTLLYLFICKGKIPAYLGSSFAFISPVLLLLPLGYEVALGGFIMCGVLFC
                     LVSFIVKKAGTGWLDVMFPPAAMG"
     gene            complement(465..1091)
                     /gene="upp"
                     /locus_tag="MOX77_002987"
     CDS             complement(465..1091)
                     /gene="upp"
                     /locus_tag="MOX77_002987"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001295473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HCA3358453.1"
                     /translation="MKIVEVKHPLVKHKLGLMRENDISTKRFRELASEVGSLLTYEAT
                     ADLETEKVTIEGWNGPVEIDQIKGKKITVVPILRAGLGMMEGVLENVPSARISVVGMY
                     RNEETLEPVPYFQKLVSNIDERMALIVDPMLATGGSVIATIDLLKKAGCSSIKVLVLV
                     AAPEGIAALEKAHPDVELYTASIDQGLNEHGYIIPGLGDAGDKIFGTK"
     gene            1504..2541
                     /gene="purM"
                     /locus_tag="MOX77_002988"
     CDS             1504..2541
                     /gene="purM"
                     /locus_tag="MOX77_002988"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001656828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HCA3358454.1"
                     /translation="MTDKTSLSYKDAGVDIDAGNALVDRIKGVVKKTRRSEVMGGLGG
                     FGALCALPQKYREPVLVSGTDGVGTKLRLAMDLKRHDAIGIDLVAMCVNDLVVQGAEP
                     LFFLDYYATGKLDVDTAASVINGIAEGCLQSGCALVGGETAEMPGMYHGEDYDVAGFC
                     VGVVEKSEIIDGSRVAEGDVLIALGSSGPHSNGYSLVRKIIDVSGCDPQTTLLEGKPL
                     ADHLLEPTRIYVKSVLELIENIDVHAIAHLTGGGFWENIPRVLPENTQAVINESSWQW
                     PAIFTWLRTAGNVSRHEMYRAFNCGVGMVIALSAPEADKALALLNEKGENAWKIGIIK
                     ASDSEQRVVIE"
     gene            2541..3179
                     /gene="purN"
                     /locus_tag="MOX77_002989"
     CDS             2541..3179
                     /gene="purN"
                     /locus_tag="MOX77_002989"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HCA3358455.1"
                     /translation="MNIVVLISGNGSNLQAIIDACEAKKIKGTLRAVFSNKADAFGLE
                     RAREAGIPAQALTADRFDSRDAFDRELIRKIDAYAPDVVVLAGFMRILSPMFVAHYYG
                     RLLNIHPSLLPKYPGLHTHRQALENGDEEHGTSVHFVTDELDGGPVILQAKVPVFAND
                     SEDDITARVQTQEHAIYPLVIGWFAQGRLKMRDNAAWLDGRRLPPQGYASDE"
     gene            3368..5434
                     /gene="ppk1"
                     /locus_tag="MOX77_002990"
     CDS             3368..5434
                     /gene="ppk1"
                     /locus_tag="MOX77_002990"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 1"
                     /protein_id="HCA3358456.1"
                     /translation="MGQEKLYIEKELSWLAFNERVLQEAADKSNPLIERMRFLGIYSN
                     NLDEFYKVRFAELKRRIIISEEQGSNSHSRHLLGKIQSRVLKADQGFDGLYNELLLEM
                     ARNQIFLINERQLSVNQQSWLRHYFKHYLRQHITPILINRETDLVQFLKDDYTYLAVE
                     IIRGDTINYALLEIPSDKVPRFVNLPPETPRRRKPMILLDNILRYCLDDIFKGFFDYD
                     ALNAYSMKMTRDAEYDLVHEMESSLMELMSSSLKQRLTAEPVRFVYQRDMPAALVDVL
                     REKLTISRYDSIVPGGRYHNFKDFINFPNVGKANLVNKPLPRLRHLWFDKEKFRNGFD
                     AIRERDVLLYYPYHTFEHVLELLRQASFDPSVLAIKINIYRVAKDSRIIDSMIHAAHN
                     GKKVTVVVELQARFDEEANIHWAKRLTEAGVHVIFSAPGLKIHAKLFLISRKEGDDVV
                     RYAHIGTGNFNEKTARLYTDYSLLTADARITNEVRRVFNFIENPYRPVTFDYLMVSPQ
                     NSRRLLYEMIDREIANAQQGLPSGITLKLNNLVDKGLVDRLYAASGSGVQVNLLVRGM
                     CSLIPQLEGISDNIRAISIVDRYLEHDRVYIFENGGDKQVWLSSADWMTRNIDYRIEV
                     ATPILDPRLKQRVLDIIDILFSDTVKARFIDKELSNRYVPRGNRRKVQAQLAIYDYIK
                     SLEQPD"
     gene            5439..6980
                     /gene="ppx"
                     /locus_tag="MOX77_002991"
     CDS             5439..6980
                     /gene="ppx"
                     /locus_tag="MOX77_002991"
                     /EC_number="3.6.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exopolyphosphatase"
                     /protein_id="HCA3358457.1"
                     /translation="MPIYDKSPRPQEFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQR
                     VHLADGLGADNKLSEEAMERGLSCLSLFAERLQGFSPSSVCIVGTHTLRQAQNAADFL
                     KRAEKVIPYPIEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPR
                     LVESRRMGCVSFAQLYFPGGVINKENFQRARMAAAQKLETLTWQYRIQGWNVAMGASG
                     TIKAAHEVLLALGEKDGFITPERLDKLKSEVLKHRSFNALSLPGLSEERKAVFVPGLA
                     ILCGVFDALAIRELRLSDGALREGVLYEMEGRFRHQDVRSRTAKSLANQYNIDREQAR
                     RVLETTMQMYEQWQAQQPKLAHPQLEALLRWAAMLHEVGLNINHSGLHRHSAYILQHS
                     DLPGFNQEQQMMMATLVRYHRKAIKLDDMPRFTLFKKKQYLPLIQLLRLGVLLNNQRQ
                     ATTTPPTLRLTTDDSHWTLCFPHDWFSQNALVLLDLEKEQQYWEAVTGWRLNIEEESS
                     PEIAA"
     gene            complement(7016..9229)
                     /locus_tag="MOX77_002992"
     CDS             complement(7016..9229)
                     /locus_tag="MOX77_002992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor domain-containing phosphodiesterase"
                     /protein_id="HCA3358458.1"
                     /translation="MKLNKTYINIRDKWWGLPLILPSILLPVLSSANTYALTSTGNVV
                     LFYLPLAFMLSLMLFFGWAALPGIVLAIFWRRYPQTGLYETLSVTMHFIITIVLSWGG
                     YRVFSPRRNNVSHGDAHLLFQRMFWQVFCSATLFLVIYQFAAFVGMYESKASLMGVMP
                     FNINTLINYQALLVGNLVGVPLCYFIIRTLRNPLHLRGYYQQLKLQIDSKATKKEIVI
                     WLAVLTTLMFILCMPLTDNSSIFSTNYTLSLLLPVMLWGAMRYGYKFISIIWAVVLIT
                     SIHYYQRYMPWYSGYDTQLAITSSSYLVFSFIVNYMSVLATRQRVVSGRARRLAYLDP
                     VVHLPNLRALNRALKNAPWSTICFLHVPGLELLGKNYGVMLRIQYKQKLSHWITPMLA
                     SNECVYQMSGHDLVLRLNTEAHQQRIEALDKHIKQFRFIWDGLPLQPPVGVSYCCVRS
                     PVSHLYLLLGELSTSSDLSLTTNAPEDLQRRGAMHLQRDLKGRIAMMNRLQQALEHDH
                     FFLMAQPIFGVRGDVYHEILLRLRDDNGDVINPDNFLPVAHEFGLSSAIDLWVIENTL
                     RFMAASREYMPAHRFAINLSPTSVCRARFPAEVKQLLTQYQVEPWQLVFEVTESNSLT
                     NAEQAQLTLGQLQQFGCQIAIDDFGTGYASYARLKNVDADILKIDGSFIRNIVSNSLD
                     YQIVASICHLARMKNMQVVAEYIESEEIRSVVLSLGIDYLQGYLIGEPQLLSEIQ"
     gene            complement(9326..9463)
                     /locus_tag="MOX77_002993"
     CDS             complement(9326..9463)
                     /locus_tag="MOX77_002993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_448898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358459.1"
                     /translation="MEDNFSIYINNKLMITKNKKTNKGCRRKVIIDLNQMLLLFNNYN
                     R"
     gene            9660..9833
                     /locus_tag="MOX77_002994"
     CDS             9660..9833
                     /locus_tag="MOX77_002994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311393.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2633 family protein"
                     /protein_id="HCA3358460.1"
                     /translation="MRKRHRFNTRMTRIVLLISFLFFFGRFVYSSIGAWQHHQDKKEA
                     QQSSLSVTTPGQR"
     gene            10097..10591
                     /locus_tag="MOX77_002995"
     CDS             10097..10591
                     /locus_tag="MOX77_002995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311394.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper 2TM domain-containing protein"
                     /protein_id="HCA3358461.1"
                     /translation="MPLVLFASFSLAGCQSNADDYAADVYQTGQLNAKQETKTVNIIS
                     VLPAKVAVDNTANKKTAQTFGAILGAVAGGVTGHNVGSGSGLGTTAGAVGGGAVGAAA
                     GSLVKDKTLVEAVSLTYKEGTKVYTSTQVGKTCQFTTGLAMVISTKDNETRIQPNTKC
                     PEKS"
     gene            10607..11146
                     /locus_tag="MOX77_002996"
     CDS             10607..11146
                     /locus_tag="MOX77_002996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016505922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5384 family protein"
                     /protein_id="HCA3358462.1"
                     /translation="MKKVILGAVLFTLSGSVLSSSLQDQLAAVAQAEQQGKNEENRQR
                     DALQAKRDQEAQQERQRQANAAAVAKQRAKAAEAERKARQAKLAAEAAQDKARDQSYE
                     DELRRLEIQKQKLALAREEARVKRENEFIDQELKSKAAQTDVIQSHADANRNLSEGGR
                     DLLQSEGKAREEKASGWFN"
     gene            11375..12064
                     /locus_tag="MOX77_002997"
     CDS             11375..12064
                     /locus_tag="MOX77_002997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001764183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358463.1"
                     /translation="MKDFSKYSKALGMAKFYVYAFYDTEDAAKKPFYIGKGKSERCLD
                     HIKYNDDSPKSERINHLLKTGNLGIDILRHGMDEATAKLVEATCIDLLGVGELTNKVR
                     GSSSLMGRITLDELNHLLLKQETEIAPEHAGLAFLLNSTYKSGMSALALYEATRGVWA
                     KVPKDENLQFAYATYGGLVMEVYEIQCWLKAGSQQYFTRELVIPPPKPTVQNLLDESH
                     HQKSEDYTLAS"
     gene            complement(12387..13964)
                     /gene="guaA"
                     /locus_tag="MOX77_002998"
     CDS             complement(12387..13964)
                     /gene="guaA"
                     /locus_tag="MOX77_002998"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HCA3358464.1"
                     /translation="MTENIHKHRILILDFGSQYTQLVARRVRELGVYCELWAWDVTEA
                     QIRDFNPSGIILSGGPESTTEENSPRAPQYVFEAGVPVFGVCYGMQTMAMQLGGHVEG
                     SNEREFGYAQVEVLTDSALVRGIEDSLTADGKPLLDVWMSHGDKVTAIPSDFVTVAST
                     ESCPFAIMANEEKRFYGVQFHPEVTHTRQGMRMLERFVRDICQCEALWTPAKIIDDAV
                     ARIREQVGDDKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNGLLRLNEAEQVMDM
                     FGDHFGLNIVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQ
                     GTIYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLELG
                     LPYDMLYRHPFPGPGLGVRVLGEVKKEYCDLLRRADAIFIEELRKADLYDKVSQAFTV
                     FLPVRSVGVMGDGRKYDWVVSLRAVETIDFMTAHWAHLPYDFLGRVSNRIINEVNGIS
                     RVVYDISGKPPATIEWE"
     gene            complement(14034..>14603)
                     /locus_tag="MOX77_002999"
     CDS             complement(14034..>14603)
                     /locus_tag="MOX77_002999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004151980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HCA3358465.1"
                     /translation="GPGSICTTRIVTGVGVPQITAVSDAVEALEGTGIPVIADGGIRF
                     SGDIAKAIAAGASAVMVGSMLAGTEESPGEIELYQGRSYKSYRGMGSLGAMSKGSSDR
                     YFQSDNAADKLVPEGIEGRVAYKGRLKEIIHQQMGGLRSCMGLTGCATIDELRTKAEF
                     VRISGAGIQESHVHDVTITKESPNYRLGS"
BASE COUNT         3802 a         3707 c         3646 g         3448 t
ORIGIN      
        1 cccattgccg caggcgggaa catcacatcc agccagccgg tgcccgcttt tttaacgatg
       61 aaagagacca gacagaacaa cacgccgcac ataataaaac cgcccagcgc cacttcataa
      121 cccagcggca acaacagtaa taccggggaa ataaaggcaa agctcgatcc gaggtaggca
      181 ggaattttac ctttgcagat aaagagatac agcaacgttc cgataccgtt aaacagcagc
      241 accgtcgcgg gattgatatg aaacagaact ggcaccagca cggtcgcgcc aaacatggcg
      301 aaaaggtgct gtaaactaag cgggattgtc tgtaaaagcg gcggtctttc actcaccccg
      361 atagcacggc gcgtcatagt gttttcctct aagtgtgttt gttattagtg gttttattca
      421 aaaaaaagcc gactcttaaa gtcggctttt aattatttat tcacttattt ggtaccaaaa
      481 atcttatcgc cggcatcgcc aagccccgga ataatgtatc cgtgctcgtt aagcccctga
      541 tcgatagagg cggtgtacag ttcaacgtcc gggtgcgctt tttccagcgc cgcaatgcct
      601 tccggcgcgg cgaccagcac cagcacctta atgctgctac agcctgcttt tttcagcagg
      661 tcgatggtcg cgatgacaga accgccggtc gccagcatcg ggtcgacgat cagcgccatg
      721 cgctcatcaa tgttcgatac cagtttctgg aaataaggta ctggctcgag cgtctcttcg
      781 ttacggtaca tcccgactac gctgatacgc gcgctcggta cattttccag aacgccttcc
      841 atcatgccca accccgcgcg cagaatcggc acaacggtaa tttttttacc tttgatctgg
      901 tcgatttcca ccgggccatt ccagccttcg atggtgactt tttccgtttc caggtcggct
      961 gtcgcttcat acgtcagcag gctgcctact tctgaggcga gttcacgaaa gcgtttagtg
     1021 ctaatgtcgt tttcacgcat cagacccagc ttgtgtttga cgagtgggtg tttgacttcc
     1081 acgatcttca tactcttctc ctatcctcag atgactggca accacaaaaa aaatcgccgg
     1141 attataccgc ttttcctctc tgacgcaaca caatgtatgc ttgacctgga tcaaccaaaa
     1201 gcgctgatag cggaaaagtg agtataaatc actcacgttg aaactggcga taaaagctaa
     1261 caaccgattg aatcttagca attttaaggg tgaatgacct gtcccgacca cctgtcgtaa
     1321 accaagtgct ggatatcctt ttctttttta ccaacaggga aattttcaag cagcgaccga
     1381 aaccatgcca aaaaatcgcc cggataacca gggcgcagac cacgctcgca aacgtttgct
     1441 ttccctgtta gaattgcgcc gaatttaact tttaccgcaa gaaaaaacgt ggggaaccag
     1501 gcagtgaccg ataagacctc tcttagctat aaagatgccg gcgtcgatat tgatgcgggt
     1561 aacgctctgg ttgatcgaat caaaggcgta gtgaagaaaa ctcgccgctc ggaggttatg
     1621 ggcggtctgg gcggtttcgg tgcgctgtgc gcgttgccgc aaaaatatcg tgaaccggta
     1681 ctggtttccg gcactgacgg cgtaggcacc aaacttcgcc tggcgatgga cttaaagcgt
     1741 cacgacgcta tcggtattga tctggtggcg atgtgcgtaa acgatctggt cgttcagggc
     1801 gcggaaccgc tgtttttcct cgattactat gccaccggta aactggatgt cgataccgcc
     1861 gccagcgtga tcaacggtat tgccgaaggc tgcctgcaat ccggctgcgc gctggtcggc
     1921 ggcgagacgg cggaaatgcc gggcatgtat cacggcgaag attacgatgt ggcgggtttc
     1981 tgcgtcggcg tagtcgaaaa atcagaaatc atcgatggct cccgggttgc cgaaggcgac
     2041 gtgctgattg cgctcggctc cagcggcccg cactcgaatg gatattcgct ggtgcggaaa
     2101 attattgacg ttagcggctg cgatccacag accactctgc tggaagggaa accgctggcc
     2161 gatcatctgc ttgaaccgac ccgtatctac gtaaaatcgg ttctggaact gattgaaaac
     2221 atcgatgtac acgctatcgc ccacctcacc ggcggcggct tttgggaaaa tattccgcgc
     2281 gttctgccgg agaataccca ggcggtaatt aatgagtcgt cctggcagtg gcccgccatc
     2341 tttacctggc tgcgaaccgc cggtaatgtc agccgacatg aaatgtaccg tgcctttaac
     2401 tgcggcgtcg gcatggtgat tgcgctctct gctccggaag cggacaaagc gcttgctctg
     2461 ctaaacgaga aaggtgaaaa cgcatggaaa atcggtatca tcaaagcctc tgattccgaa
     2521 cagcgtgtgg ttattgaata atgaatattg tggtgctgat ttccggcaat ggaagcaatt
     2581 tacaggcgat tatcgatgcc tgcgaagcga agaaaattaa aggcaccctc agggcagtat
     2641 tcagcaataa ggccgacgcg ttcggccttg aacgcgccag agaagccggc attccggcgc
     2701 aagcgctgac tgccgatcgg tttgacagcc gcgacgcctt cgatcgcgag ttgattcgca
     2761 agatagacgc gtatgcgccc gatgtggtcg tgctggccgg ttttatgcgt attctgagtc
     2821 cgatgtttgt cgcgcattac tacgggcgtc tgctgaacat tcacccttcc ctgctgccaa
     2881 aatatccggg gttgcatacc catcgccagg cgctggaaaa cggcgatgag gagcacggta
     2941 cctcggtgca tttcgtgaca gacgaactcg acggcggccc ggtcattctc caggcgaagg
     3001 tgccggtttt tgccaacgac agcgaagatg atatcaccgc acgcgtacaa actcaggaac
     3061 atgcgattta tccgctggtg attggctggt ttgcgcaggg gcgtctaaag atgcgcgata
     3121 acgccgcctg gctggacggg cgtcgtctgc cgccgcaagg ttatgcgtct gacgaataat
     3181 atgtcatcgg ccagggctgc gtctgcttgc cggatggcgg cataaatgcc tatccggcct
     3241 actcttttcc cttcctttat gctatcagtt tattgtcata tttttctgac gctgttggac
     3301 attaacgcgt aatgctcgcc ataattatca ggcagtgtcc cgtgaataaa acggagtata
     3361 ggtagtaatg ggtcaggaaa agctatatat cgagaaagag ctgagctggt tagcatttaa
     3421 cgaacgcgtg ttacaggaag cagcggataa atccaacccg ttgattgagc ggatgcggtt
     3481 cctgggaatc tattctaata acctcgacga gttctacaaa gtgcgtttcg ctgaactgaa
     3541 acgacgcatt attatcagcg aagaacaggg ttcaaattct cattcacgcc atttgttagg
     3601 caaaattcag tcccgcgtgt tgaaagcaga ccaggggttc gacggcctgt acaacgaatt
     3661 actgctggaa atggcgcgta atcaaatctt tctgatcaac gagcgtcagc tctcggtgaa
     3721 ccaacaaagc tggttgcgcc actattttaa gcactatttg cgccagcata ttaccccgat
     3781 tctcattaac cgggagacgg atcttgttca gtttttaaaa gatgattaca cctatctggc
     3841 ggtggagatt atccgcggcg acaccatcaa ctatgcgctg ctggagatac cgtccgacaa
     3901 agtcccacgc ttcgttaatc tgccgccgga gacaccgcgc agacgcaagc cgatgatcct
     3961 actggataat attctgcgct actgcctgga tgacattttt aaagggttct tcgactatga
     4021 cgcgctcaat gcctattcga tgaaaatgac ccgcgatgcc gaatatgacc tggtgcatga
     4081 gatggaatcc agtctgatgg agctgatgtc ctccagcctg aagcagcgcc tgaccgctga
     4141 acctgtgcgc tttgtctatc aacgcgatat gcccgccgcg ctggtcgacg tgctgcggga
     4201 aaaactgacg atctcccggt atgactcaat cgtacccggc gggcgctacc acaattttaa
     4261 agactttatt aattttccga atgtcggtaa agccaacctg gtcaataaac cgttaccgcg
     4321 gttacgccat ctttggtttg ataaagagaa gtttcgtaac ggtttcgacg cgattcgtga
     4381 acgtgatgtg ctgctctatt atccgtacca taccttcgag catgtactgg aactgctgcg
     4441 ccaggcgtcg tttgacccaa gcgtgctggc gatcaaaatc aatatttatc gcgtagcgaa
     4501 agactcgcgc attattgact cgatgatcca tgccgcccat aacggcaaaa aagtcaccgt
     4561 ggtggtggag ttgcaggcgc gcttcgatga agaggcgaat attcactggg ccaagcggtt
     4621 aaccgaagcg ggcgtccatg ttattttctc tgcgcccggg ctgaaaattc acgccaaact
     4681 ctttctcatc tcacgaaaag agggcgatga cgtggtgcgt tatgcgcata tcggcaccgg
     4741 taacttcaac gaaaaaacgg cgcggctgta taccgattat tcgctgctga ccgccgatgc
     4801 gcgcattacc aatgaagtgc gccgggtctt taattttatt gaaaacccct atcgcccggt
     4861 cactttcgat tatttgatgg tttctccaca aaactcacgg cgtctgctgt atgagatgat
     4921 cgatcgtgaa attgccaatg cccagcaagg cttaccgtca gggattacct taaagcttaa
     4981 caacctggtc gataaagggt tggtcgacag gctatacgcc gcgtcgggtt cgggcgtcca
     5041 ggtcaatctg ctggtgcgcg gtatgtgttc tcttattccg caactggaag gcattagcga
     5101 taatattcgc gcgattagca tcgtggatcg ctatctggaa cacgatcggg tttatatttt
     5161 cgaaaacggc ggtgataagc aagtttggct ctcttcagct gactggatga cgcgtaatat
     5221 tgactaccgt atcgaagtcg ctacgcctat cctcgacccg cggcttaaac aacgcgtcct
     5281 ggatatcatt gacattctgt ttagcgacac ggtaaaagcg cgttttatcg ataaagaact
     5341 cagcaaccgc tacgtaccgc gcggcaatcg ccgcaaagtt caggcgcagc tggcaattta
     5401 tgactacatc aaatcactcg agcaaccaga ctaacgctat gccaatttac gataaatccc
     5461 ctcgcccgca ggagttcgct gcggtcgatc tcggctcaaa cagctttcat atggtcattg
     5521 cccgcgtggt tgacggcgca atgcagatta tcgggcgctt aaaacagcgc gtccatctgg
     5581 cggacgggct gggcgcagat aacaaactca gcgaagaagc catggaacgg gggcttagct
     5641 gtctgtcgct gtttgctgaa cgcttacaag gtttctcccc ttccagcgtt tgtatcgtag
     5701 gcacccatac gttacgtcag gcgcaaaatg ccgctgattt tctcaaacgc gcggaaaagg
     5761 ttattcccta cccgatagag attatttccg gtaacgaaga agcgcgcctg atttttatgg
     5821 gcgtagaaca tacgcagccg gaaaaaggcc gcaagctggt gatcgatatc ggcggcggat
     5881 caacagagct ggttattggc gaaaacttcg aacccaggct ggttgaaagc cgtcgtatgg
     5941 gctgcgtgag cttcgcgcag ctctactttc ccggcggcgt tatcaataaa gaaaacttcc
     6001 agcgcgcccg aatggcggca gcgcaaaaac tggaaacctt aacctggcag tatcgtattc
     6061 agggttggaa cgtggcgatg ggcgcttccg gtacgattaa ggccgctcat gaagttctcc
     6121 tggcgctggg tgagaaagat ggcttcatta cgccggagcg cctcgataaa ctgaagtcag
     6181 aagtgttgaa gcaccgctcc tttaatgcgc tcagcctgcc gggtctgtct gaagaacgaa
     6241 aagcggtctt tgtgccgggc ctggcgattc tgtgcggcgt ttttgatgct ctggctatcc
     6301 gcgagcttcg cctttccgac ggcgcgttgc gcgaaggcgt gctgtatgaa atggaaggcc
     6361 gcttccgcca tcaggatgtt cgcagccgta ccgcaaaaag tctggccaat caatacaaca
     6421 ttgacagaga acaggccaga cgtgtgctgg aaaccaccat gcagatgtac gagcagtggc
     6481 aggcccagca gccaaaactg gcgcatccgc agcttgaagc gttgctccgc tgggcggcaa
     6541 tgctgcatga ggttggactg aatattaatc acagcggttt acatcgccat tcggcttata
     6601 ttctgcaaca cagcgatttg cccggcttta atcaggagca gcaaatgatg atggcgacgc
     6661 tggtgcgtta tcatcgtaaa gccataaaac tggatgatat gccccgcttt acgctgttta
     6721 agaaaaaaca gtatctgccg ttaattcagc tacttcggct gggcgtatta ctgaacaacc
     6781 agcggcaggc gaccaccaca ccgccgacgc tgcggctaac gaccgatgac agccactgga
     6841 cgttatgttt tccgcatgac tggttcagcc agaatgcgct ggtactgctt gatctggaaa
     6901 aagaacagca gtactgggaa gcggtaactg gctggcgtct caatattgag gaagaaagct
     6961 cgccggagat cgccgcgtaa attgtggatc agacgccgcg ctgcggcgtc tgcctttact
     7021 gaatctcaga taatagctgc ggctcgccaa ttaaatatcc ctgaagatag tcgatcccca
     7081 acgacagcac tacgcttcgt atttcttcgc tctcgatata ctccgcgacg acctgcatat
     7141 ttttcattcg cgctaaatga caaatagaag ccacaatctg ataatcgaga ctgtttgaca
     7201 ctatattgcg aataaaactg ccgtcaattt taagaatatc ggcgtcaacg tttttcagcc
     7261 gcgcatagct ggcgtagcca gtaccgaaat catcaatcgc tatctgacag ccaaactgct
     7321 gtagctgtcc cagtgtcaac tgcgcctgct cagcattggt gagagagttg ctttccgtta
     7381 cctcaaaaac cagttgccag ggttcaacct gatattgcgt aagcagctgc ttaacttctg
     7441 cagggaaacg ggcgcggcat accgatgttg gcgacagatt aatggcaaaa cgatgcgcgg
     7501 gcatatattc ccggctggcc gccataaacc gtagcgtgtt ttcaatcacc cagagatcga
     7561 tagcggaaga caaaccaaac tcatgcgcca cgggtaaaaa attgtccggg ttgataacgt
     7621 cgccgttgtc atccctgagt cgcagtaaaa tttcatggta aacgtcccca cgaacaccga
     7681 aaataggctg cgccatcagg aaaaaatgat cgtgctccaa cgcctgttgc aggcgattca
     7741 tcatcgcaat tctgcccttc aaatcgcgct gcaggtgcat tgcgccgcgc cgctgtaaat
     7801 cctccggcgc gttagtcgtc aacgaaagat cggaactggt gcttaattcg cccaacagca
     7861 gataaaggtg gctaaccgga gaacgcacgc agcagtagct cacgccaaca ggcggctgta
     7921 gcggcagtcc atcccaaata aaccgaaact gcttaatatg tttatccagc gcttcaatac
     7981 gctgctgatg cgcctctgta ttaagacgca gcaccaggtc gtgccctgac atctggtaga
     8041 cgcactcatt tgaggccaac atcggcgtaa tccagtgaga gagcttttgc ttatactgga
     8101 tgcgtagcat gacgccataa tttttaccca atagctccag acccggcacg tgtaaaaaac
     8161 agatcgtaga ccagggtgca tttttaagcg cgcggtttaa cgcacgtaaa ttgggaagat
     8221 gtacaaccgg gtcaagatag gccagccgcc gtgcgcgacc actcactacg cgctgacgcg
     8281 tggccagtac agacatataa ttaacaataa aagaaaaaac cagatagctc gaagaggtaa
     8341 tcgctaattg cgtatcataa cctgaatacc agggcatata acgctgataa taatgaatcg
     8401 acgtaattag cacgacggcc cagataattg aaataaactt ataaccatag cgcatcgcgc
     8461 cccacagcat gaccggcaat aataacgaaa gcgtatagtt ggtactaaat attgagctat
     8521 tatccgtcaa tggcatacac agtataaaca ttagtgtagt caatacagcc agccaaataa
     8581 cgatctcttt tttagtggcc ttgctatcaa tctgtagctt taattgctga taataccccc
     8641 gcaggtgcag cggattgcgg agagtacgaa taataaaata gcacaatggc acgccgacaa
     8701 ggttaccgac cagtaacgcc tggtaattaa tcagcgtgtt gatattaaag ggcattaccc
     8761 ccatcaggct ggctttactt tcgtacatgc caacaaaagc ggcaaactgg taaatgacca
     8821 gaaataatgt cgctgaacaa aatacctgcc agaacattcg ttgaaacaac aggtgggcgt
     8881 cgccgtggga aacattgttt cgccgggggg aaaagacacg atagccgccc cagcttagca
     8941 cgatagtaat gataaagtgc atcgtcacag aaagggtttc atacagccct gtctgcgggt
     9001 atctgcgcca gaagatagca agcacaatgc ccggcagtgc tgcccagccg aaaaagagca
     9061 tcagactaag cataaaagct aacggcaggt aaaaaagaac cacatttcca gtgctggtaa
     9121 gcgcataagt atttgcgcta cttaaaacag gtagtaaaat cgaagggaga atgagcggta
     9181 gtccccacca tttatctctg atatttatat aagttttatt cagcttcata gatgctcagc
     9241 agaacccccc aatcccaaag gggcgttaac agacaggcat cccacctgac tttaaattga
     9301 tgatgcgata tacatcacac gatagtcatc gattgtaatt attaaacaaa agtaacattt
     9361 gatttaagtc aattattacc tttctcctgc agcctttatt cgtcttttta ttctttgtta
     9421 tcattaattt attattaatg taaatactaa aattatcttc cataacaata taagataaat
     9481 caactgacgc aattttacat taagaggaat tgaccatcgg ttcgcagtat gccttaatgt
     9541 agagtgaacg caggcttgtt acgttcttcg ccttgataat acctttgaag aacccagcct
     9601 gatcccgccc ataccgctgg gccaacgtta aggaaccctt tgtaagtcag gccaacagta
     9661 tgcgaaaacg acatcgattt aacactcgca tgacccgtat cgtactgctt atcagttttc
     9721 tcttcttctt tggacgtttc gtctactctt ctatcggcgc ctggcagcac catcaggata
     9781 aaaaagaagc gcaacagtca tcgctttcgg tcaccacgcc gggacaacgt taagctgtta
     9841 tccgttaaaa tagtgatggc ggtattatcg tcacaggttt gccgtgttat ccagcgctct
     9901 gttatcccct tccctggctt agcatgaacc gataaaaaca aagcatcgta tcatctaatg
     9961 ctttgttttt tagtctaaaa aaaacaatca actacaagaa acgatagttt acttttttta
    10021 agattagtct taaatacatt cctttttgcg ttattaccta aacaaggaat tgtgatgaat
    10081 ttaaaaaaaa aatgctttgc ctctggtttt gtttgcctct ttttctcttg ccggatgcca
    10141 gtccaatgcg gatgactacg ccgcagatgt ttaccaaacc gggcagttaa acgcgaagca
    10201 agaaacaaag accgtcaata ttatctctgt tttgccagcg aaagttgccg tagataacac
    10261 cgccaataaa aaaaccgctc agaccttcgg cgcaattctt ggggctgtag cgggcggcgt
    10321 tactggtcat aacgtgggct caggtagcgg tttgggtact actgccggcg cggttggcgg
    10381 cggagccgtt ggcgcagcgg cggggtcatt ggttaaagat aaaacgttag ttgaagccgt
    10441 atctttgact tacaaagaag gaacgaaggt ttatacctcc acccaggtgg gaaaaacgtg
    10501 ccaatttacc accggtctgg ctatggtgat atcgaccaaa gataacgaaa cgcgaattca
    10561 acccaatacg aaatgtcctg agaaaagcta actatcggga gattttatga agaaagttat
    10621 tttaggcgct gttttattca ctctaagcgg ctcggtttta tcttcttctt tgcaggatca
    10681 gcttgcggcg gtagcccagg ctgaacagca aggaaaaaat gaagaaaaca gacagcgtga
    10741 tgctctgcaa gccaaacgag atcaagaggc tcaacaggaa agacaaaggc aagccaatgc
    10801 ggcagcggtt gctaagcagc gagcaaaagc ggcagaagct gaacggaaag cacggcaagc
    10861 aaaattggca gcggaagccg cgcaagataa agcgcgcgat caaagctacg aagatgagct
    10921 tcgtcgttta gaaattcaga aacaaaaact ggcgctggcc agggaagagg cccgggtaaa
    10981 aagagaaaat gaattcatcg atcaagagct gaaaagtaaa gctgcccaga cagatgttat
    11041 tcaatctcat gctgatgcaa acagaaatct atctgaaggc ggtcgcgatc tgctgcaaag
    11101 cgaaggtaaa gcccgtgagg aaaaggcaag cggctggttt aactgatttc gctaatcatt
    11161 tatgtgtatt agctcagatt tgacctgaca tagctatggc acagacctaa acctaatctg
    11221 acaggcaggt ctgtgccaat agcggacgtt gttaactttg gcccatattc atcaatggac
    11281 gcaggtcaat ctatacgcta attgttttgc gcttaagttc tgaactatag tgccgatagt
    11341 aaaattaagt acttttgcct taaggaagca aggtttgaaa gatttttcaa aatactcaaa
    11401 agcgttaggg atggctaagt tctatgttta tgcattttat gacactgaag atgcagctaa
    11461 gaagccgttt tatataggca aaggcaagtc agaacgctgc cttgatcata taaagtataa
    11521 tgatgactct ccgaaatcag aacgaattaa tcatctgtta aaaacaggaa atctgggtat
    11581 cgacatacta cgccatggca tggatgaggc aaccgcgaag cttgttgaag caacatgtat
    11641 tgatctcttg ggtgttggag aactgaccaa caaagtacga ggaagcagct cccttatggg
    11701 gcgaatcacg ctggatgagc tcaatcatct tcttcttaag caagagacgg aaatcgcacc
    11761 tgaacatgcc gggctcgctt ttttgctaaa cagcacctac aagtctggca tgagtgcact
    11821 tgcattatat gaagctacgc gtggcgtctg ggcaaaagta ccaaaagatg aaaacctaca
    11881 atttgcatac gccacctacg gcggtttggt gatggaagtt tacgagatac agtgctggtt
    11941 gaaggcaggc tctcagcaat actttacccg ggaattggtc atcccccccc cgaaaccaac
    12001 cgttcagaat ttgttggacg aatcgcatca ccagaaatca gaggattata cgttggcaag
    12061 ctaatcaaaa aatcgcgtag tcatggtagc cctttcgtaa aagtcgggct ggcggagtaa
    12121 actgacctgc ttcccgttga ttaatacacc tcaatgccag tcatgttgtt gaagctacca
    12181 atgtccgcac ctcgctcgaa gccgactgtc agatttgatt gtgtgctgcc agtgaaaccc
    12241 actattgtgt cgatgcagtg ctttgccgcc agaagctgtg cactacacag aaaatgcatc
    12301 tatgcacata aataaaaacc ctctgcaaaa acagagggtt aaattcactt ttacctgttc
    12361 atgaaaacac aggaagggtt atcgacttat tcccactcaa tggtagccgg tggtttaccg
    12421 ctgatgtcat acaccacacg ggaaatcccg ttgacttcat tgatgatgcg gttggaaaca
    12481 cgacccagga agtcatacgg caggtgcgcc cagtgcgcgg tcataaagtc gatggtttcg
    12541 acagcacgca gagagaccac ccaatcgtac ttacgaccat cgcccattac gccaacggag
    12601 cgtactggca ggaagacggt gaacgcctgg ctgactttgt cgtacagatc cgccttacgc
    12661 agctcttcaa tgaagatggc atcagcacgg cgcagcaggt cgcagtactc tttcttcact
    12721 tcacccagta cacgtacgcc gaggcccggc cccgggaacg gatgacggta cagcatgtcg
    12781 tacggcaggc ccagctccag accaatctta cgcacttcgt ctttgaacag ctctttcagc
    12841 ggttcaacca gccccatctt catctctttc ggcaggccgc caacattgtg gtgagatttg
    12901 atgacgtgcg ctttaccggt tgcagacgcc gcagattcga tgacgtcagg gtagatggtg
    12961 ccctgcgcca gccatttcac gtcttccagt ttcaacgctt cttcgtcgaa cacttccaca
    13021 aaaacacggc caatgatctt acgcttcgct tccggatcgt tttcgccagc caacgcggac
    13081 aggaagcgat cttctgccgg tacgtgaacg atgttcagac caaaatggtc gccaaacatg
    13141 tccatcacct gctcggcttc gttgagacgc agcaggccgt tgtcgacgaa tacacaggtc
    13201 agatttttac cgatcgcgcg gtgcagcagc attgcggtta cggaagaatc cacgccgccg
    13261 gagagaccga ggatcacttt atcgtcgcct acctgctcgc gaatgcgcgc cacggcgtcg
    13321 tcgatgatct tcgccggcgt ccacagggct tcacactggc agatatcacg cacaaaacgc
    13381 tccagcatgc gcataccctg gcgggtgtga gtcacttccg ggtggaactg tacgccgtag
    13441 aagcgttttt cttcgttagc catgatggcg aacgggcagc tttcggtgct ggctacggtc
    13501 acgaagtcgg acggaatcgc cgtcacttta tcgccgtggc tcatccacac gtccagcagc
    13561 ggtttgccgt cggcggtcag ggaatcttca ataccgcgaa ccagcgcgct gtcggtcagc
    13621 acttcgacct gcgcgtaacc aaattcacgc tcattagaac cttctacatg accgccaagc
    13681 tgcatcgcca tggtctgcat cccgtagcag acgccaaata ccggcacgcc tgcttcaaag
    13741 acatactgcg gcgcgcgcgg gctgttttct tcggtggtgc tttccgggcc gccggaaaga
    13801 ataatgccgc ttgggttgaa gtcacgaatt tgtgcttctg tcacatccca cgcccacagt
    13861 tcgcagtaaa cacccagctc acgcacgcgg cgcgcaacca gttgagtgta ctgagaaccg
    13921 aagtccagaa tgaggatgcg atgcttatga atgttttccg tcattgacgc ttattccgag
    13981 gcaagtgaaa cagattaaat aaatcgcccg acgcgaaggt cgggcgaaga aaatcaggag
    14041 cccagacggt agttcgggga ctctttggtg atggtcacgt cgtgaacgtg gctttcctgg
    14101 atacccgcac cgctgatacg cacaaactcc gctttagtac gcagttcgtc gatggtagca
    14161 caaccggtca gccccataca ggagcgcagg ccgcccatct gctggtgaat gatctctttc
    14221 aggcgacctt tataggctac gcggccttcg ataccttccg gcaccagttt gtcggcggcg
    14281 ttgtcgctct ggaagtaacg gtcagaggaa cctttggaca tcgcgcccag cgagcccatg
    14341 ccgcggtaag atttgtaaga acggccctgg tagagttcga tttcgcccgg ggattcttcg
    14401 gtacccgcca gcatagaacc gaccatgaca gcgctcgcgc ctgcggcgat ggctttggcg
    14461 atgtcgccgg agaaacggat accgccgtca gcgataaccg gaatcccggt gccttccagc
    14521 gcttcaactg cgtcagaaac agcggtaatc tgcggaacgc ccacgccagt cacgatacga
    14581 gtggtacaga tggaacccgg gcc
//
LOCUS       DAGWFR010000100        14441 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.102, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000100 DAGWFR010000000
VERSION     DAGWFR010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 14441)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14441)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14441
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.102"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..98
                     /locus_tag="MOX77_003000"
     CDS             <1..98
                     /locus_tag="MOX77_003000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004942378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HCA3358466.1"
                     /translation="LSGPAARPYNRRQDAKYRDQQGAVASRIDKD"
     gene            137..1993
                     /gene="asmA"
                     /locus_tag="MOX77_003001"
     CDS             137..1993
                     /gene="asmA"
                     /locus_tag="MOX77_003001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane assembly protein AsmA"
                     /protein_id="HCA3358467.1"
                     /translation="MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSE
                     YQLQLDGPLRWHVWPQLSILSGRMTLTARGASEPLVRADNMRLDVALWPLLSHQLHVK
                     QVMLKGGVIQLTPQTEAVRSDDAPVAPKDNTLPDVAEDRGWSFDIRSLRVAGSVLVFQ
                     HENDDQVTVRDIRLNMEQDAEHRGTFDFSGRVNRDQRDLALSFSGTVDASDYPHNLTA
                     GIEQLRWQLQGADLPAQGIEGQGQLQAQWQEAQKRLSFNHLNLTANDSSLTGHVQVTL
                     AEQPEWQIDLRSSKLNLDNLLPHHSAVAQTGGAVSQGQNTLPLTRPVIASRVGAPPYQ
                     GLQSFTAEIALQADSVRWRGMDFTQVSTKMSNQTGLLDITELQGKLADGEMSLPGTLD
                     ARTASPRIEFHPRLNHVEIGTILKAFNYPISLTGKMSLVGDFSGADIDAEAFRHSWKG
                     KAHVDMSNTRLEGMNFQQLVQQAVERSGGDAQQSQENMDNATRLDRFTTDLTLNKGTL
                     TLDDMVGQSSMLALTGSGTLDLVKQSCDTQFNLRVLGGWNGDSNLITFLKETPVPLRV
                     YGKWQELNYTLQVEQLLRKHLQDEAKRRLNDWADRNKDTRNGKDVKKLLNKL"
     gene            complement(2079..3659)
                     /locus_tag="MOX77_003002"
     CDS             complement(2079..3659)
                     /locus_tag="MOX77_003002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HCA3358468.1"
                     /translation="MEWIADPSIWAGLVTLIVIELVLGIDNLVFIAILAEKLPPGQRD
                     RARITGLILAMIMRLLLLASISWLVTLTKPLFSVQALSFSARDLIMLFGGFFLLFKAT
                     MELNERLEGKDSANPTQRKGAKFWAVVAQIVVLDAIFSLDSVITAVGMVDHLAVMMAA
                     VIIAISLMLLASKSLTRFVNNHPTIVILCLSFLLMIGFSLVAEGFGFHIPKGYLYAAI
                     GFSVMIEALNQLAIFNRRRFLSANHTLRQRTTEAVMRLISGKKEDAELDAETAAMLAD
                     HDDSQIFNPQERRMIERVLNLNQRTVSSIMTSRHDIEHIDLNAPEAEIRALLEKNQHT
                     RLVVTGENEQEDLLGVVHVIDLLQQSLRGEPLNLRALIRQPLVFPETLPLLPALEQFR
                     NARTHFAFVVDEFGSVEGIVTLSDVMETIAGNLPNEVEEIDARHDIQKNPDSSWTANG
                     HMPLEDLVQYVPLPLDEKREYHTIAGLLMEYLQRIPQTGEEVQVGDYLLKTLQVESHR
                     VQKVQLIPLHNGEPDQEM"
     gene            4333..5472
                     /locus_tag="MOX77_003003"
     CDS             4333..5472
                     /locus_tag="MOX77_003003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide export protein"
                     /protein_id="HCA3358469.1"
                     /translation="MMKSKMKLMPLLASLSLISGCTVLPGSNMSTMGKDVIKQQDADF
                     DLDRMVNVYPLTPRLVEQLRPRPNVAQPNMSLDQEIASYQYRVGPGDVLNVTVWDHPE
                     LTTPAGQYRSSSDTGNWAQPDGTMFYPYIGKVSVVGKTLSEIRSDITGRLAKYIADPQ
                     VDVNIAAFRSQKAYISGQVNKSGQQAITNVPLTVLDAINAAGGLTDMADWRNVVLTHN
                     GKEQRISLQALMQNGDLSQNRLLYPGDILYVPRNDDLKVFVMGEVKKQSTLKMDFSSM
                     TLTEALGNAEGIDLTTSNASGIFVIRPLKGEGGRGGKIANIYQLDMSDATSLVMATEF
                     RLQPYDVVYVTTAPVARWNRLINQLLPTISGVRYMTDTASDIHSW"
     gene            5478..5927
                     /gene="wzb"
                     /locus_tag="MOX77_003004"
     CDS             5478..5927
                     /gene="wzb"
                     /locus_tag="MOX77_003004"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight
                     protein-tyrosine-phosphatase Wzb"
                     /protein_id="HCA3358470.1"
                     /translation="MFNKILVVCVGNVCRSPTAERLLKRFHPSLTVASAGLGALVGKG
                     ADPAAASVASAHDLSLENHCARQISARLCREYDLILTMEKRHIAALCDIAPEMRSKVM
                     LFGHWDSEREIPDPYRKSRDAFEAVYTLLERSARQWAQALNAEQGKP"
     gene            5924..8083
                     /gene="wzc"
                     /locus_tag="MOX77_003005"
     CDS             5924..8083
                     /gene="wzc"
                     /locus_tag="MOX77_003005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-protein kinase Wzc"
                     /protein_id="HCA3358471.1"
                     /translation="MTEKVKQSAAVTGSDEIDIGRLVGTVIEARWWVLGTTAIFALCA
                     VIYTFFATPIYSADALVQIEQNAGNSLVQDINSALANKPPASDAEIQLIRSRLVLGKT
                     VDDLDLDIAVTKNTFPLFGAGWERLMGRHNEMVKVTTFTRPETMSGQIFTLKVLGDKR
                     YQLVSDGGFSAQGVVGQPLNKDGVTMRVEAIDARPDTEFTVSKFSTLGMINNLQNNLT
                     VTETGKDTGVLNLTFTGEDRDQIRDILNSITRNYLQQDIAWKSEEAGKSLAFLAKQLP
                     EVRSRLDVAENKLNAFRQDKDSVDLPLEAKAVLDSMVNIDAQLNELTFKEAEISKLFT
                     KAHPAYRTLLEKRKGLEDKKAKLNGRVTAMPKTQQEIVRLTRDVESGQQVYMQLLNKQ
                     QELKITEASTVGNVRIVDPAITQPGVLKPKKALIILGSIILGLMLSIVGVLLRSLFNR
                     GIESPQALEEHGISVYASIPLSEWQKARDSVKTIKGIKRYKQSQLLAVGNPTDLAIEA
                     IRSLRTSLHFAMMQAQNNVLMLTGVSSSIGKTFVCANLAAVISQTHKRVLLIDCDMRK
                     GYTHELLGTNNVDGLSDILAGKGEIASCAKPTAIANFDLIPRGQVPPNPSELLMSERF
                     GELIAWASSRYDLVLIDTPPILAVTDAAIVGRHVGTTLMVARYAVNTLKEVETSLSRF
                     DQNGIQVKGVILNSIFRRATGYQDYGYYEYEYQSDSK"
     gene            8170..9012
                     /gene="wcaA"
                     /locus_tag="MOX77_003006"
     CDS             8170..9012
                     /gene="wcaA"
                     /locus_tag="MOX77_003006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis glycosyltransferase
                     WcaA"
                     /protein_id="HCA3358472.1"
                     /translation="MTTDNPLISIYMPTWNRQQLAIRAIKSVLRQDYRHWEMIIVDDC
                     SSSYQQLQQFVEELNDPRVRYTHNAMNTGACAVRNQAIMQAQGHYITGIDDDDEWTPN
                     RLSVFLAHKHQLTTHAFLYANDYVCEGEVYSQPASLPLYPKSPYSRRLFYKRNIIGNQ
                     VFTWAWRFKACLFDTELKAAQDYDIFLRMVVEYGEPWKVEEATQILHINHGEMQITSS
                     PKKFSGYFHFYRKHKDKFDRASKKYQLFTLYQIRNKRMTWRTLLTLLSVRNSKRLAAG
                     LRGR"
     gene            9015..9503
                     /gene="wcaB"
                     /locus_tag="MOX77_003007"
     CDS             9015..9503
                     /gene="wcaB"
                     /locus_tag="MOX77_003007"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis acetyltransferase
                     WcaB"
                     /protein_id="HCA3358473.1"
                     /translation="MLEDLRANSWSLRPCCMVLAYRIAHFCSVWRKKNVLNNLWAAPV
                     LVLYRVITECLFGYEIQAAATIGRRFTIHHGYAVVINKHVVAGDDFTIRHGVTIGNRG
                     ADSLACPVIGHGVELGANVILLGDITIGNHVTIGAGSVVLDSIPDHALVVGEKARVKV
                     ST"
     gene            9500..10717
                     /gene="wcaC"
                     /locus_tag="MOX77_003008"
     CDS             9500..10717
                     /gene="wcaC"
                     /locus_tag="MOX77_003008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis glycosyltransferase
                     WcaC"
                     /protein_id="HCA3358474.1"
                     /translation="MNILQFNVRLAEGGAAGVALDLHLRALQKGLTSHFVYGYGKGGK
                     KSVSHHRYPQVIKQTPRGTAIANIALFRFLNRDLFGNLDNLYRTVIQTSGPLVLHFHV
                     LHSYWLNLADIVTFCEKVKAQKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKSGCQKCP
                     TLSNYPPVRVDRAHQLIDGKRQRFRDMLRLGCQFISPSQHVAEAFNSVYGAGLCRVIN
                     NGIDLATEAILAQLSPVPLNPGKPRIAIVAHDLRYDGKTDQRLVHDMMALGEKIELHT
                     FGKFSPFTGQNVVNHGFETDKRKLMSALNEMDALVFSSRVDNYPLILCEALSIGVPVI
                     ATHSEAAQEVLAKSGGQTFAATDVLRLAQRRKPEIAQAVFGATLDAFRMRSRVAYSGQ
                     QMLEEYVSFYQNL"
     gene            10692..11905
                     /gene="wcaD"
                     /locus_tag="MOX77_003009"
                     /pseudo
     CDS             10692..11905
                     /gene="wcaD"
                     /locus_tag="MOX77_003009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461057.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="putative colanic acid polymerase WcaD"
     gene            11918..12664
                     /gene="wcaE"
                     /locus_tag="MOX77_003010"
     CDS             11918..12664
                     /gene="wcaE"
                     /locus_tag="MOX77_003010"
                     /EC_number="2.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis glycosyltransferase
                     WcaE"
                     /protein_id="HCA3358475.1"
                     /translation="MFLSVVTVAFRNYEGVVKTWRSLRNLARDPGLSFEWIVVDGGSE
                     DGTREFLQKRHGEFNLRFISEKDRGIYDAMNKGIALAQGRYTLFLNSGDAFHDDAALF
                     VRQLARQKGEAMYIGDALLDFGGGHKIRRKAKPGYYIYHSLPASHQAIFFPTAALKKY
                     PYDLQYHVSSDYALAARLYKAGYPFRRINGLVSEFSMGGVSTSNNLELCQDAKNVQRK
                     ILRVPGFWAQLSYLLRLKTTGKTKARYNKV"
     gene            12680..13234
                     /gene="wcaF"
                     /locus_tag="MOX77_003011"
     CDS             12680..13234
                     /gene="wcaF"
                     /locus_tag="MOX77_003011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis acetyltransferase
                     WcaF"
                     /protein_id="HCA3358476.1"
                     /translation="MQDLSGFTVPKGFRGANALKVQLWWAVQATLFAGSPQILYRWRA
                     FLLRLFGAKIGKNVVIRPSVKITYPWKLTVGDYAWIGDDAVLYTLGEINIGAHAVISQ
                     KGYLCTGSHDYTSAHFDINAAPIVIGEKCWLATDVFVAPGVTIGHGTVVGARSSVFKS
                     LPANAICRGNPAVVTRQRVQKVTP"
     gene            13258..14379
                     /gene="gmd"
                     /locus_tag="MOX77_003012"
     CDS             13258..14379
                     /gene="gmd"
                     /locus_tag="MOX77_003012"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005128297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HCA3358477.1"
                     /translation="MSKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERV
                     DHIYQDPHSCNPKFHLHYGDLTDASNLTRILQEVQPDEVYNLGAMSHVAVSFESPEYT
                     ADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVA
                     KLYAYWITVNYRESYGIYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYL
                     GNMDSLRDWGHAKDYVRMQWMMLQQEQPEDFVIATGVQYSVRQFVELAAAQLGIKLRF
                     EGEGINEKGIVVSVTGHDAPGVKPRDVIVAVDPCYFRPAEVETLLGDPSKAHEKLGWK
                     PEITLSEMVSEMVANDLEAAKKHSLLKSHGYEVAIALES"
BASE COUNT         3449 a         3550 c         4023 g         3419 t
ORIGIN      
        1 cgctgtccgg cccggcggcg cggccttata accgccgtca ggatgccaaa tatcgcgatc
       61 agcagggcgc tgttgccagc cggattgata aagactgagc cattcggcgc aatactgccg
      121 gtccattgag ggtagcatga gacgatttct gacgacgctg atgattctct tggtcgtgct
      181 ggtggccgga ttctctgcgt tggtattgtt ggtcaatccg aatgatttcc gcgcctatat
      241 ggtgcagcag gttgccgcgc gtagtgaata tcagttgcaa ctggacgggc cgctgcgctg
      301 gcacgtatgg ccgcaactca gtatcctttc cgggcgaatg acgctaacgg cgcgaggcgc
      361 cagcgaaccg ctggtgcggg ctgacaatat gcgcctggat gtcgctttat ggccgctgtt
      421 gagtcatcag cttcatgtta agcaggtgat gctgaaaggc ggggtgattc aactgacgcc
      481 gcaaacggaa gcggtacgca gtgatgatgc gccggtcgcg ccgaaagata ataccttgcc
      541 ggacgtagcg gaagatcgcg gctggtcgtt tgatattcgt agcctgcgcg ttgccggcag
      601 cgtgctggtt ttccagcatg aaaatgatga tcaggtcacg gtgcgcgata ttcgtctgaa
      661 tatggaacaa gatgccgagc atcgcggcac gtttgatttt tcgggacgcg tgaaccgcga
      721 tcagcgggat cttgctttat cgttcagcgg aacggtggat gcttccgatt atccgcataa
      781 tttaaccgcg ggtattgagc aactgcgctg gcaattgcag ggcgcggatc taccggcgca
      841 ggggattgag gggcagggac aattgcaggc gcagtggcag gaggcgcaaa aacgtctttc
      901 atttaaccac ttaaatttaa cggcgaatga cagttctctg accgggcatg ttcaggtaac
      961 gctggcggag cagccggaat ggcaaattga cctccggtcc agcaagctta atctggacaa
     1021 cctgttgccg catcatagcg ccgtggctca gacaggcggc gcggtgtcgc aggggcaaaa
     1081 tacgctcccc ctgaccaggc cagttatcgc gtcgcgtgtt ggtgcgccgc cttatcaggg
     1141 gctgcaaagc tttacggcgg agattgcttt acaggcggat tcagttcgct ggcggggaat
     1201 ggactttacc caggtttcga cgaagatgtc taatcagacc ggattgctgg atattactga
     1261 gttgcagggg aaactggccg acggagagat gtcgctgccc ggcacgctgg acgcccgcac
     1321 cgccagtccg cgcatcgaat tccaccctcg cctcaaccat gttgagattg ggactatcct
     1381 gaaagccttc aattatccga ttagcctgac cggtaagatg tcgctggttg gcgatttctc
     1441 cggggcggat attgacgcag aggcatttcg ccatagttgg aaaggaaaag cgcatgttga
     1501 catgagcaat acgcgccttg aaggaatgaa tttccagcaa ctggtgcagc aggccgtaga
     1561 gcgaagcggc ggcgacgcgc agcagtcgca ggaaaatatg gacaacgcga cccgactgga
     1621 tcgcttcacg accgatctga cgctaaataa gggcacgctg acgctcgacg acatggtcgg
     1681 gcaatcttct atgctggcgt taaccggcag cggaacgctg gatctggtta agcagagctg
     1741 tgatacacaa tttaatctgc gtgtgctggg cggctggaac ggcgatagca acctgatcac
     1801 cttcctgaaa gagacgccgg tgccgttgcg cgtctatggc aagtggcagg agctgaacta
     1861 taccctgcaa gtggagcagt tattgcgtaa gcatttacag gatgaggcga agcgtcggct
     1921 caatgactgg gcggatcgca ataaagatac ccgcaacggt aaagatgtga agaagctgct
     1981 gaataagctg tagtttttgg ccaaagggca gagccggatg gcgaggctaa cgcgcctccg
     2041 gcctgcctgg taagcaggcc ggggcaggcg aacagacgtt acatctcctg gtctggctcg
     2101 ccgttatgca gcggaattaa ctgcactttc tgcactcgat ggctttctac ctgcaatgtt
     2161 ttcagcaaat aatcgcccac ctgaacctct tcaccggttt gcggtatgcg ttgcaaatat
     2221 tccatcaata atccggcaat cgtatggtat tcccgttttt catccagcgg tagcggcacg
     2281 tactgcacca aatcctccag cggcatatgg ccgtttgctg tccaggaact gtccgggttc
     2341 ttctgaatat cgtggcgggc gtcaatttcc tcgacttcat tcggcagatt accggcgata
     2401 gtctccatga catcgcttaa tgtcacaatg ccttcaaccg agccaaactc atctacgaca
     2461 aaggcaaaat gggttctggc gttacggaac tgctccagcg caggcagcag cggcaatgtt
     2521 tccgggaaaa ccagcggttg gcgaatcagc gcccgcaggt tgagcggttc gccgcgcagc
     2581 gattgttgca acagatcgat gacgtggacg acgccgagta aatcttcctg ttcattttca
     2641 cccgtcacga ccagacgcgt atgctggttc ttttccagca gagcgcggat ttccgcttcc
     2701 ggcgcgttga gatcgatatg ctcgatatcg tgacgcgacg tcatgatgct acttacggtg
     2761 cgctggttga gattcagcac ccgctcaatc atcctgcgct cctgcggatt aaaaatctgg
     2821 ctgtcgtcat ggtctgccag catcgcggcg gtttccgcat ccagttcggc atcctctttt
     2881 ttaccgctaa tcagccgcat cacggcctcc gttgtgcgct ggcgcagcgt atggttagcg
     2941 gaaagaaaac ggcggcggtt aaaaatagcc agttggttga gcgcctcgat catcaccgag
     3001 aagccgatag ccgcgtacag ataccctttc ggaatgtgga aaccaaaccc ttccgccacc
     3061 aggctaaagc cgatcattag caggaagcta aggcacaaaa tgacaatggt gggatggttg
     3121 ttcacaaatc gggtcaggga cttgctggcg agcagcatca ggctaatggc gattatcacg
     3181 gccgccatca tgaccgctag gtgatcgacc atccccacgg cggtaatcac ggagtcgaga
     3241 gaaaagatag cgtccagcac cactatttgc gcgaccaccg cccagaattt cgccccctta
     3301 cgctgggtag ggttggcgct atctttccct tccagccgtt cgttgagctc catggtggct
     3361 ttaaagagca ggaagaagcc gccgaacagc ataatcagat cgcgggcgct aaagcttaac
     3421 gcctgtacgc taaagagcgg cttagtcaag gtgaccagcc acgagattga cgccagcagc
     3481 agcaggcgca tgatcatcgc cagtatcagg ccggtaatgc gcgcgcggtc gcgctgcccc
     3541 ggcggtagtt tttcagcgag gatggcaata aagaccaggt tatcaatgcc gagaacaagt
     3601 tcgataacga ttaacgttac cagtccggcc cagattgacg gatcggcaat ccattccata
     3661 gtaagagcaa taccttctgt aatatgacaa ttgtcacaat tcgatcatgg ataatacggc
     3721 ggaaaaatgc aatgccgcag agcaatttat ctttgttacg gggctataaa ataactttaa
     3781 aatagccgta atgtttctgt cggaaactaa ataatgtcaa gaatatattt aggaaatatc
     3841 gcaggtggag tggagtaaat aaatattgtc aacatcaata aaatcctaaa atcatctgtt
     3901 aattcattta atattaatct taaaaatata gaatggcggg tttgttacct tgcttgtcat
     3961 taggttagct gcaacaattc ttgcaggatt aagatagcgc gcttaaatat cctgtcacga
     4021 catcgagaaa actattaata cgtaaccttt atttcgctga agatttttat ctgaacgagg
     4081 atgaaattgg aggggaatgc gaaaatttag aataatcagt gtattggtag ctaagaagct
     4141 aggggcggta gcgtgcctga aagcctgaat ataagacttt attattctgt caatagcctg
     4201 cggatgaatt gatttttttc agaatgatgc cagttaattt tctctgccat taactgcaag
     4261 gtaaatgtgc acggacgaag ccgctattta aattgcacag gataatgact ctgccaaagt
     4321 gataaataat caatgatgaa atccaaaatg aaattgatgc cattattggc gtcgctcagc
     4381 ttgataagtg gttgcacagt actcccgggc agcaatatgt ctacgatggg gaaagatgtg
     4441 atcaaacagc aagacgctga ctttgatctc gaccggatgg tcaatgtgta tccgctgacg
     4501 ccacggctgg ttgagcaatt acgcccgcgg cccaatgtcg cgcaaccgaa tatgtcgctg
     4561 gaccaggaga tcgccagcta tcagtatcgc gtcgggcctg gcgatgtgct gaatgtcacc
     4621 gtctgggatc acccggaatt gaccacgcca gcaggccagt accgtagctc aagcgatacc
     4681 ggcaactggg ctcagccgga cggcaccatg ttttatccct atattggcaa ggttagcgtc
     4741 gtcggtaaaa ctttgtcaga gattcgcagc gatattaccg ggcgtttagc gaagtacatc
     4801 gcagacccgc aggtggatgt caatatcgcc gctttccgct cgcaaaaagc gtatatctcc
     4861 ggccaggtga ataaatccgg tcagcaggcc attactaacg tcccgctaac cgtcctggat
     4921 gcgattaacg ctgcgggcgg cctgaccgat atggcggact ggcgcaacgt cgtgttgacg
     4981 cacaacggca aagaacagcg catttcgcta caggcgctga tgcaaaatgg cgatcttagt
     5041 cagaaccgct tgctctaccc tggcgacatt ctgtatgtgc cgcgcaatga cgatctgaaa
     5101 gtctttgtca tgggcgaagt gaaaaaacag agcaccctca aaatggattt cagcagcatg
     5161 acgctcaccg aagcattagg caatgcggaa ggcatcgatc tgaccacctc caacgccagc
     5221 ggcatttttg tgattcgtcc gttgaaaggc gaggggggac gcggcggcaa gatcgccaat
     5281 atctaccagc ttgatatgtc tgacgccacg tcattggtga tggcgacgga attccgactt
     5341 cagccttacg atgtggtgta cgtcacgacc gcgccggttg ctcgctggaa ccgtctgatc
     5401 aatcagttgc tgccgaccat tagcggtgtc cgttatatga cggatacggc cagcgacatt
     5461 cattcctggt aatcgttatg tttaacaaaa tcttagtggt ctgtgtgggg aatgtttgcc
     5521 gttccccgac ggcggaacgt ttgctaaagc gctttcatcc ttcgctgacg gttgcgtctg
     5581 ccggattagg cgcgctggtc ggcaaaggag ccgatcctgc ggcggcgagc gtggcgagcg
     5641 cccacgatct gtctttggaa aatcactgcg caaggcaaat ttccgcgcgc ctgtgccggg
     5701 aatatgacct gattctgacg atggagaaac gccacatcgc cgccctgtgc gacattgcgc
     5761 cggaaatgcg cagcaaggta atgctgtttg gtcactggga cagcgagcgt gaaataccag
     5821 acccgtatcg caaaagccgc gatgcgtttg aggcggtgta cacattactg gaaaggtctg
     5881 cccgccagtg ggcgcaggca ctgaatgcag agcagggaaa accatgacag aaaaagtaaa
     5941 acaatctgcg gcggttacgg gtagcgatga aatcgatatc gggcgtctgg tcggaacggt
     6001 gattgaagcg cgttggtggg tgttggggac gacggccata tttgcgctgt gcgcggtaat
     6061 ttatacgttc ttcgccacgc ccatctatag cgccgatgcg ctggtgcaga ttgaacaaaa
     6121 cgccggtaat tcgctggtac aggatatcaa cagcgcatta gcgaataagc cgccggcttc
     6181 cgatgcggaa attcagctca ttcgatcgcg cctggtgctg gggaagaccg ttgacgatct
     6241 ggatctggat attgccgtca ccaaaaacac ctttccgctg ttcggcgccg ggtgggagcg
     6301 gctgatggga cgtcacaatg aaatggtgaa agtcacgaca ttcacccgac cagagacgat
     6361 gagcggacag atcttcaccc tcaaagtgct gggcgacaaa cgttatcagt tggtcagcga
     6421 cggcggattt agcgcgcagg gcgttgtggg ccagccactc aataaagacg gcgtgacgat
     6481 gcgggtagag gcgattgacg cccgtcctga tacggaattt acggtgagta aattctcaac
     6541 gcttggcatg attaataacc tgcaaaataa cctcaccgta acggaaaccg gcaaagatac
     6601 cggcgttctg aacctgacgt tcacgggaga ggatcgcgac cagatccgcg acattctcaa
     6661 cagtattacc cgtaactatc tgcaacagga tattgcgtgg aaatctgaag aggcggggaa
     6721 gagcctggcg tttctggcaa aacaactgcc ggaagtccgc agccgtctgg atgtggcgga
     6781 aaacaagcta aacgctttcc gccaggataa agactcggtg gatttaccgc tggaggcgaa
     6841 ggcggtgctc gattcgatgg ttaatatcga cgcccagttg aatgagttga cgtttaaaga
     6901 agcggaaatt tccaagctct ttaccaaagc gcatccggct taccgcaccc tgctggaaaa
     6961 acgtaaaggg ctggaagata aaaaagccaa actgaacggg cgggtgacgg cgatgccgaa
     7021 aacccagcag gagattgtgc gtttgacccg cgatgtggag tccggccagc aggtttatat
     7081 gcaactgctt aataaacagc aggagctgaa aatcaccgaa gccagcaccg ttggcaacgt
     7141 gcgcatcgtt gacccggcga ttacccagcc gggcgtgcta aagccgaaaa aggcgttgat
     7201 tattctcggc agcattattc tgggattaat gttatcgatt gtcggcgtgc tgctgcgctc
     7261 gctgtttaat cgcggtatcg aaagcccgca ggcgctggag gagcacggga tcagcgtcta
     7321 tgccagtatt ccgctgtcgg aatggcaaaa agcgcgcgat agcgtcaaaa ccattaaagg
     7381 gattaagcgt tacaagcaga gccaactgct ggcggtgggc aatccgaccg atctggcgat
     7441 tgaggcgatt cgcagcctgc gcaccagcct ccatttcgcc atgatgcagg cgcaaaataa
     7501 tgtactcatg ctcacaggcg tcagctcctc tatcggtaaa acctttgttt gcgccaacct
     7561 ggcggccgtc atcagccaga cgcataaacg ggtattactg atcgactgcg atatgcgcaa
     7621 gggctacacc catgaactgc tcggcaccaa taacgtggac ggcttatctg acattctggc
     7681 gggcaaaggc gagatagcct cctgcgcgaa acccacggcg atcgctaatt ttgatcttat
     7741 tccgcgcggt caggtaccgc ctaatccatc ggaattgctg atgagcgagc gcttcggcga
     7801 gctgatcgcc tgggcaagca gccgctacga cctggtatta atcgacacgc cgccgattct
     7861 ggccgtgacg gacgccgcga ttgtgggtcg tcacgttggg acgacgctga tggtggcgcg
     7921 ttatgccgtc aacaccttga aagaagtgga aaccagtctg agccgttttg accagaatgg
     7981 cattcaggtc aaaggcgtca ttctcaactc cattttccgc cgggcgacgg gctaccagga
     8041 ttatggctat tacgagtatg aataccagtc agattccaaa taaaaaataa ggcgtgccgg
     8101 atggcgcggc ctgtgactgt aggccggaca agcgtagcgc catgcggcaa aactatctgg
     8161 ggaataagca tgacaacaga caatccgctg atctcaattt atatgccaac ctggaacagg
     8221 cagcagttgg ctatccgggc gattaaatca gtactacgtc aggactaccg tcactgggag
     8281 atgatcatcg tggatgattg ctcctcgtct tatcagcagc tacaacaatt tgttgaggag
     8341 ctgaacgacc cgcgcgttcg ttatactcat aacgccatga ataccggcgc ctgcgcggtt
     8401 cgcaaccagg ccattatgca ggcgcaagga cactacatta ccgggattga tgatgacgat
     8461 gaatggacgc ccaaccgtct gagcgtgttt ctggcccata aacaccagtt gactacgcat
     8521 gcctttttgt atgccaacga ctatgtgtgc gagggcgagg tctactctca gcctgccagc
     8581 ctgccgctgt atccgaaatc cccttattcg cgccgcttgt tctacaagcg caatattatt
     8641 ggcaatcagg tttttacctg ggcctggcgt tttaaagcgt gtttgttcga taccgaactc
     8701 aaggcggcgc aggattacga catttttctg cgcatggtgg tggagtatgg cgaaccgtgg
     8761 aaagttgaag aggcgacgca aattttacat atcaaccacg gcgagatgca gattacctct
     8821 tcgccgaaaa agttctccgg ctatttccat ttttatcgta agcacaaaga taaattcgat
     8881 cgcgccagca aaaaatacca gctttttacg ctgtaccaaa ttcgcaataa gcgaatgacc
     8941 tggcgcacgt tgctgacgtt gctctccgtg cgtaatagca aacgcctggc ggccgggctg
     9001 cgggggcgat aacgatgctg gaagacttac gcgcgaatag ctggagctta cgcccctgtt
     9061 gcatggtgct ggcctaccgt atcgctcatt tttgttccgt ctggcgcaaa aagaatgtgc
     9121 tgaataatct gtgggccgcg ccggtgctgg tgctgtatcg cgtgatcacg gaatgcctgt
     9181 tcgggtatga aatccaggcc gccgcgacca ttggtcggcg gttcactatc catcatggtt
     9241 acgcggtagt gatcaacaaa catgtcgtcg ccggcgacga ttttaccatt cgccacggcg
     9301 tcaccattgg caatcgcggc gcggacagcc tggcttgtcc ggtgattggt cacggcgttg
     9361 agctgggggc gaacgtcatc ctgcttggcg atattactat cggtaatcac gtcacgattg
     9421 gcgcgggtag cgtggtgctt gacagtattc cggatcatgc gctggtggtg ggagaaaaag
     9481 cacgggtgaa ggtcagcaca tgaatattct gcaatttaat gtacggctgg cggaaggcgg
     9541 tgcggcggga gtggcgttag atcttcatct gcgggcgctg caaaaagggc tgacgtcgca
     9601 ttttgtttat ggttatggca aaggcggaaa aaaaagcgtc agtcaccacc gttatccgca
     9661 ggtgataaaa cagacgccgc gcggcacggc aatcgccaat atcgcgctat ttcgtttcct
     9721 gaatcgcgat ctgtttggca atctcgacaa tctttaccgc acggttatcc agacatccgg
     9781 cccgctggtg ctgcattttc atgttctcca cagttactgg ctaaacctgg cggatatcgt
     9841 gacgttttgc gaaaaagtca aagcacaaaa accggacgtc acgctggtct ggacgctgca
     9901 cgatcactgg agcgttaccg ggcgttgcgc cttcaccgac ggttgcgagg gctggaaaag
     9961 cggctgccaa aaatgtccga ccctaagcaa ttatccgcca gtcagggtgg atcgggcgca
    10021 ccagcttatt gacggcaaac gtcagcgctt tcgtgacatg ctgcggctgg gctgccagtt
    10081 tatttcgccg agccagcatg tggccgaggc ctttaacagc gtttatggcg cgggactctg
    10141 ccgggtgatt aacaacggta tcgatctggc gaccgaggcg attctcgcgc aactatcacc
    10201 tgtgccgctg aatccgggca aaccgcggat cgccattgtg gcgcatgact tgcgttacga
    10261 cggcaaaact gaccagcgtc tggtacacga catgatggcg ctgggcgaaa aaattgaact
    10321 gcataccttc ggtaaatttt cgccttttac cggccaaaac gtcgttaatc acggttttga
    10381 aaccgataag cgcaaattaa tgagcgcgct caatgagatg gacgcgctgg tctttagctc
    10441 gcgggtcgat aactatccgc tgatcttgtg tgaagcgctc tcgatcggcg taccggtaat
    10501 cgccacccac agcgaggcgg cgcaggaggt gctggcgaaa tccggcggcc agacttttgc
    10561 cgctacagat gtactgcgcc tggcgcagcg gcgtaagcca gagattgctc aggcggtatt
    10621 cggcgcaacg ctggacgcct ttcgtatgcg tagccgcgtc gcgtacagcg gtcaacagat
    10681 gctggaggag tatgtctcgt tctatcagaa tctgtagcta tctgctgctg ccgctgatct
    10741 acctactggt caatgtcaag attgcccaac tgggggaaag ctttcccatt accatcgtca
    10801 cttttttacc gctgttgctg ctgttatttg tggaacgcat tagcgtaaaa aaattgatga
    10861 tcgccttagg catcggcgcg gggcttacgg catttaactt cctgttcggc cagtcgctga
    10921 atgccggtaa atatgtcacg tccacgatgc tgtttgtcta tattgtggtc attatcggga
    10981 tggtctggag tatccgattc aaaaccattt ccgcgcataa ccaccgaaag attttgcgtt
    11041 tttttatctg gtggtgggta tagtggtcgc gctcgccgcg gttgagatgg cgcaaattat
    11101 ccttaccggc ggcagcagta tcatggaagg aatttcgaaa tatctcattt acagtaatag
    11161 ctacgtactg aacttcataa aatttggcgg taagcgtacc actgcgcttt attttgaacc
    11221 ggcatttttc gctttggcac taatctcaat ttggctgagc atcaaacagt ttggtatcaa
    11281 aataccgaaa agcgatgcta tgattctggc agggataata ttatcaggat cattttcagg
    11341 ggtaatgacc tttatcctgt tttaccttct ggagtgggcg ttccaatatt tgaataagga
    11401 tgcgataaag aaaaaacttc cactggcgct ggtatcatta accctgtttt tggttggggt
    11461 aattattgca tttccttata tcgcgacacg acttggcgat ttagggacgg aaggattatc
    11521 ttcttattat cgtattgtgg gcccgttagt catggtcgga tattccttga cccatattga
    11581 tggtgtagtc agatttggct cactttatga atatgtcgca tcattcggaa tctttaacgg
    11641 tgcggatgtc gggaaaacca tagacaatgg attgtatctg ctgattattt atttttcctg
    11701 gttcgcagtg ctaatgacgc tgtggtatat ggggaaagtt ttaaaaatgg cgctaaatgc
    11761 gtttggcgat aatcgcaatt ttcgggtgca gctctatctt tttacgccgg tgtcgctgtt
    11821 ttttaccggt tcaatattta gcccggaata tgctttttta atcgtctgtc cgttcatttt
    11881 gcgcaaggcg ttaaaaattt cataacgggg tggttgcatg tttttaagcg tcgttaccgt
    11941 cgcctttcgc aattacgaag gggtggtaaa aacctggcgc tcgctgcgca atctggcgcg
    12001 cgatccgggc ctgtcatttg aatggatcgt agtggatggc ggttcggagg acggcacgcg
    12061 cgaatttctg caaaaacgtc acggtgagtt taacctgcgt tttatcagtg aaaaggatcg
    12121 cggtatttat gatgccatga acaaaggcat tgccttggcg caggggcgct ataccctgtt
    12181 tcttaattcc ggtgatgcgt tccatgatga tgccgcgctg tttgtccgcc aactggcgcg
    12241 gcaaaagggc gaggcgatgt atattggcga cgcgctgctg gatttcggcg gcgggcataa
    12301 aatacgccgg aaagctaaac ccgggtatta tatctaccat agtttgccag ccagccatca
    12361 ggcgatattt ttcccgacgg cagcgttaaa aaagtatcct tatgatctgc aatatcatgt
    12421 ctcttcagat tatgcgctgg cggcccgtct ctataaagca ggctatcctt ttcggcgaat
    12481 taacggactg gtatctgaat tttcgatggg cggcgtgtca acctcgaata atctggaatt
    12541 atgtcaggat gcaaaaaacg tacagcgaaa aatattacgt gttccagggt tttgggcgca
    12601 attatcctat ttgttacgtc tgaaaacgac gggtaaaaca aaagcgcggt ataacaaagt
    12661 ctaatcaccg ggagttatta tgcaggatct tagcggcttt acggtgccga aagggttccg
    12721 cggcgctaat gcgctaaaag tacaattatg gtgggcggta caggcgacat tattcgccgg
    12781 atcgccgcaa atattgtatc gctggcgagc ctttttgctg cgtctgtttg gcgccaaaat
    12841 tggaaaaaat gtggttattc gaccgtcagt aaaaattacc tatccgtgga aattaaccgt
    12901 cggcgattat gcctggatag gcgacgacgc tgtgttatat acgttgggtg aaattaatat
    12961 tggcgcacat gcggttattt cacaaaaagg ttatttatgt accggtagcc atgattatac
    13021 cagcgcccat ttcgatatta acgccgcgcc gattgttatt ggcgaaaaat gttggctggc
    13081 gaccgatgtt tttgtcgcgc ccggcgtgac gataggtcat ggcaccgtcg tcggcgcgcg
    13141 tagcagcgta tttaaatcat taccggcaaa tgcgatttgt cggggcaatc ccgcagtggt
    13201 aacgcgccag cgcgttcaga aagttactcc ctaacgggac tatttgagga aatgaaaatg
    13261 tcaaaagtcg ctctcattac tggcgtaacc ggacaggatg ggtcttacct ggcagaattt
    13321 ctgctggaaa aagggtatga ggtgcatggt atcaagcgtc gcgcgtcatc gtttaatacc
    13381 gagcgcgtgg accatattta tcaggacccg cacagctgca acccgaaatt tcatctgcat
    13441 tatggcgacc tgaccgacgc ctcaaacctg acccgcattt tacaagaagt gcagccggat
    13501 gaggtctaca acctgggcgc gatgagccac gtggcggtgt cgtttgagtc gccggaatat
    13561 accgccgatg tggatgcgat gggcactctg cgcctgctgg aggcgatccg cttcctcggt
    13621 cttgaaaaga aaacgcgttt ctaccaggcc tccacctctg aactgtacgg gctggtgcag
    13681 gaaatcccgc agaaagagac cacgccgttc tacccgcgtt ctccctatgc ggtggcgaaa
    13741 ctgtacgcct actggatcac cgtcaactac cgtgaatcct acggtattta cgcctgtaac
    13801 ggcattctgt ttaaccacga gtctccgcgt cgtggcgaaa ccttcgtcac ccgtaagatc
    13861 acccgcgcca tcgccaatat cgcccaggga ctggagtcct gcctgtatct cggcaacatg
    13921 gactcgctgc gcgactgggg ccatgcgaaa gattacgtac ggatgcagtg gatgatgtta
    13981 cagcaggagc agccggaaga tttcgtgatt gccaccggcg tgcagtattc cgtacgccag
    14041 tttgtggagc tggcggcggc gcaactgggg ataaaactgc gctttgaagg cgaaggcatt
    14101 aatgagaaag ggatcgtggt atccgttacc ggacacgatg cgccgggcgt gaaaccgagg
    14161 gatgtgattg tggccgttga tccgtgttat ttccgtccgg cggaagtgga aaccctgctg
    14221 ggcgatccgt ccaaagcgca tgagaaactg ggctggaaac cggaaattac cctgtcggag
    14281 atggtctccg agatggtggc gaacgatctg gaggccgcga aaaaacactc actgctgaaa
    14341 tctcacggtt acgaggtggc catcgcgctg gagtcctgag aatgaataag caacgaattt
    14401 ttgtggcggg ccatcgcggg atggtgggct ccgccattgt a
//
LOCUS       DAGWFR010000101        14374 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.103, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000101 DAGWFR010000000
VERSION     DAGWFR010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 14374)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14374)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14374
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.103"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..1206)
                     /gene="selA"
                     /locus_tag="MOX77_003013"
     CDS             complement(<1..1206)
                     /gene="selA"
                     /locus_tag="MOX77_003013"
                     /EC_number="2.9.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-seryl-tRNA(Sec) selenium transferase"
                     /protein_id="HCA3358478.1"
                     /translation="MTSETRTLYSQLPAIDRLLHDSAFLSLRDRYGHTQVVDLLRRML
                     DDARDVIRNTQTLPDWYADWAQEAKLRLENAAQSALRPVINLTGTVLHTNLGRALQAQ
                     EAIEAVTQAMRAPVTLEYDLDGAGRGHRDRALATLLCRITGAEDACIVNNNAAAVLLM
                     LAATASGKEVVVSRGELVEIGGAFRIPDVMRQAGCTLHEVGTTNRTHAKDYRQAVNEN
                     TGLLMKVHTSNYSIEGFTKTVEEAELAEIGRELDIPVVADLGSGSLVDLSQYGLPKEP
                     MPQQLIAAGVSLVSFSGDKLLGGPQAGIIVGKKAMIAQLQSHPLKRALRADKMTLAAL
                     EATLRLYLHPEALAEKLPTLRLLTRSEASIREQAQRLQARLAARYGDEFALEVKPCLS
                     QIGSGSLPVD"
     gene            complement(1305..1913)
                     /locus_tag="MOX77_003014"
     CDS             complement(1305..1913)
                     /locus_tag="MOX77_003014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase"
                     /protein_id="HCA3358479.1"
                     /translation="MKLIGSYTSPFVRKISVLLLEKGITFEFINELPYEADNGVAQYN
                     PLGKVPALVTEKGEYWFDSPIIAEYIELLDIAPAMLPRDPMAALKVRQLEALADGIMD
                     AALVSVREQARPAAQQSETELLRQREKINRSLDMLESYLSDGTLKTDTVNLATIAIAC
                     AVGYLNFRRVAPGWCVSRPHLVKLVETLFQRESFARTEAPKA"
     gene            2388..4304
                     /gene="mtlA"
                     /locus_tag="MOX77_003015"
     CDS             2388..4304
                     /gene="mtlA"
                     /locus_tag="MOX77_003015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannitol transporter subunit IICBA"
                     /protein_id="HCA3358480.1"
                     /translation="MSSDIKIKVQSFGRFLSNMVMPNIGAFIAWGIITALFIPTGWLP
                     NETLAKLVGPMITYLLPLLIGYTGGRLVGGERGGVVGAITTMGVIVGADMPMFLGSMI
                     AGPLGGYCIKKFDSWVDGKIKSGFEMLVNNFSAGIIGMILAILAFLGIGPAVEVLSKI
                     LAAGVNFMVAHDMLPLASIFVEPAKILFLNNAINHGIFSPLGIQQSHEMGKSIFFLIE
                     ANPGPGMGVLLAYMFFGRGSAKQSAGGAAIIHFLGGIHEIYFPYVLMNPRLILAVILG
                     GMTGVFTLTILNGGLVSPASPGSILAVLAMTPKGAYFANIAAIVAAMAVSFVVSAILL
                     KTSKVKEEDDIEAATRRMHDMKAESKGASPLAAGDVTNDLSHVRKIIVACDAGMGSSA
                     MGAGVLRKKVQDAGLSQISVTNSAINNLPPDVDLVITHRDLTERAMRQVPQAQHISLT
                     NFLDSGLYTSLTERLVAAQRHNTNEEKVRDHLKDSFEEGDNNLFKLGAENIFLGRKAA
                     NKEEAIRFAGEQLVKGGYVEPEYVEAMLDREKLTPTYLGESIAVPHGTVEAKDRVLKT
                     GVVFCQYPEGVRFGEEEDDIARLVIGIAARNNEHIQVITSLTNALDDESVIERLAHTT
                     SVDEVLELLAGKKA"
     gene            4525..5673
                     /gene="mtlD"
                     /locus_tag="MOX77_003016"
     CDS             4525..5673
                     /gene="mtlD"
                     /locus_tag="MOX77_003016"
                     /EC_number="1.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannitol-1-phosphate 5-dehydrogenase"
                     /protein_id="HCA3358481.1"
                     /translation="MKALHFGAGNIGRGFIGKLLADAGIQLTFADVNQVVLDALNARH
                     SYQVHVVGENEQVDTVSGVNAVSSIGDDVVDLIAHVDLITTAVGPVVLERIAPAIAKG
                     LVKRKAQGVDAPLNIIACENMVRGTTQLKGHVMNALADGDKAWVEQHVGFVDSAVDRI
                     VPPSASATNDPLEVTVETFSEWIVDKTQFKGALPNIPGMELTDNLMAFVERKLFTLNT
                     GHAITAYLGKLAGHQTIRDAILDEGIRAVVKGAMEESGAVLIKRYGFDADKHAAYIQK
                     ILGRFENPYLKDDVERVGRQPLRKLSAGDRLIKPLLGTLEYGLPHVNLVKGIAAAMHF
                     RSDEDPQAQELAALITEKGPQAALAQISGLDANSDVVAEAVNAYNATK"
     gene            5670..6260
                     /gene="mtlR"
                     /locus_tag="MOX77_003017"
     CDS             5670..6260
                     /gene="mtlR"
                     /locus_tag="MOX77_003017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannitol operon repressor MtlR"
                     /protein_id="HCA3358482.1"
                     /translation="MTQNPAQVSLRPNNRLSDMQAIMEQTQAFENRVLERLNAGKTVR
                     SFLITAVELLTEAVNILVLQVFRKDDYAVKYAVEPLLDGDGPLGDLSVRLKLIYGLGV
                     LSRTEYEDAELLMALREELNHDGNEYAFTDDEILGPFGELHCVMALPPPPHFDTSDAA
                     LYAMQIQRYQQAVRSTMVLSLTELISKISLKKAFQK"
     gene            complement(6270..6476)
                     /locus_tag="MOX77_003018"
     CDS             complement(6270..6476)
                     /locus_tag="MOX77_003018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358483.1"
                     /translation="MAKIGENVPLLIDKAVDFMASSQAFREYLNKTPPRDYVPSEVPS
                     ESTPIYLQRLEYYRRLYRPKEERG"
     gene            6767..7129
                     /locus_tag="MOX77_003019"
     CDS             6767..7129
                     /locus_tag="MOX77_003019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YibL family ribosome-associated protein"
                     /protein_id="HCA3358484.1"
                     /translation="MKEVEKNEIKRLSDRLDAIRHQQAGLSLVESADKYAELEKEKET
                     LEAEIIRLREVHSQKLSKEAQKLMNLPFRRAITKKEQADMGKLKKSVRGLIVVHPMTA
                     LGREMGLKEMTGFAKSEF"
     gene            7617..8300
                     /locus_tag="MOX77_003020"
     CDS             7617..8300
                     /locus_tag="MOX77_003020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3251 domain-containing protein"
                     /protein_id="HCA3358485.1"
                     /translation="MYKNGKFIPLLALGFTFFLSGCDYFADKHLVEELKKQQKEQEAK
                     INLLEKQQKEQEVKINLPEKQQTTVINTTQKIAEVVGRVERKQRLFDYTELDPSQTHY
                     FIINNGNIGLAGRILSIEPIDNGSVIHLDLVNLLSIPVSNLAFNMTWGTKKPSEAKDL
                     PRWRQLLLNTKMDSTIELLPGAWTNVTLTLKGVSPNNLKYLKIGIDMENVIFDSIQPI
                     NDTKKKPKK"
     gene            8344..11421
                     /locus_tag="MOX77_003021"
     CDS             8344..11421
                     /locus_tag="MOX77_003021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YadA-like family protein"
                     /protein_id="HCA3358486.1"
                     /translation="MNRIFKVLWNAATGTFIVTSETAKSRGKKSGRRKLAVSALVGLS
                     SIMVSADALANAGNDTGSINQNTTDIATNTTSINNLSNSVTTLTDDALLWDAASGTFS
                     ASRNGSASKITNLAAGTLAADSTDAVNGSQLFDTNEKVDQNTADITTNTNSINQNTTD
                     IATNTTSINNLSNSVTTLTDDALLWDADSGTFSASRNGSASKITNLAAGTLAADSTDA
                     VNGSQLYETNQKVDQNTSAIADINTSITNLSSDNLSWNETTNSFSASHGSSTTNKITN
                     VAAGELSEESTDAVNGSQLFETNEKVDQNTTDIAANTTNITQNSTAIENLNTSVSDIN
                     TSITGLTDNALLWDEDTGAFSANHGGSTSKITNVAAGALSEDSTDAVNGSQLYETNQK
                     VDQNTSAIADINTSITNLGTDALSWDDEEGAFSASHGTSGTNKITNVAAGEIASDSTD
                     AINGSQLYETNMLISQYNESISQLAGDTSETYITENGTGVKYIRTNDNGLEGQDAYAT
                     GNGATAVGYDAVASGAGCLALGQNSSSSIEGSIALGSGSTSNRAITTGIRETSATSDG
                     VVIGYNTTDRELLGALSLGTDGESYRQITNVADGSEAQDAVTVRQLQNAIGAVTTTPT
                     KYYHANSTEEDSLAVGTDSLAMGAKTIVNADAGIGIGLNTLVMADAINGIAIGSNARA
                     NHANSIAMGNGSQTTRGAQTDYTAYNMDTPQNSVGEFSVGSEDGQRQITNVAAGSADT
                     DAVNVGQLKVTDAQVSRNTQSITNLNTQVSNLDTRVTNIENGIGDIVTTGSTKYFKTN
                     TDGADANAQGADSVAIGSGSIAAAENSVALGTNSVADEANTVSVGSSTQQRRITNVAA
                     GVNNTDAVNVAQLKASEAGSVRYETNADGSVNYSVLNLGDGSGGTTRIGNVSAAVNDT
                     DAVNYAQLKRSVEEANTYTDQKMGEMNSKIKGIENKMSGGIASAMAMAGLPQAYAPGA
                     NMTSIAGGTFNGESAVAIGVSMVSESGGWVYKLQGTSNSQGDYSAAIGAGFQW"
     gene            11720..13375
                     /gene="lldP"
                     /locus_tag="MOX77_003022"
     CDS             11720..13375
                     /gene="lldP"
                     /locus_tag="MOX77_003022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HCA3358487.1"
                     /translation="MNLWQQNYDPAGNIWLSSLIASLPILFFFFALIKLKLKGYVAAS
                     WTVVIALAVALLFYKMPVDHALASVVYGFFYGLWPIAWIIIAAVFVYKISVKTGQFDI
                     IRSSILSITPDQRLQMLIVGFCFGAFLEGAAGFGAPVAITAALLVGLGFNPLYAAGLC
                     LIVNTAPVAFGAMGIPILVAGQVTDLDSFEIGQMVGRQLPFLTIIVLFWIMAIMDGWR
                     GVKETWPAVMVAGGSFAIAQYLSSNFIGPELPDIISSLVSLVCLTLFLKRWQPVRIFR
                     FGDMGASQVDQTLARTRYTTGQIVRAWSPFLFLTATVTLWSIPPFKALFAPGGALYDW
                     VINVPVPYLDKLVARMPPVVHEATAYAAVYKFDWFSATGTAILFAALLSIVWLKMKPS
                     AAIQTFGSTLKELALPIYSIGMVLAFAFISNYSGLSSTLALALAHTGSAFTFFSPFLG
                     WLGVFLTGSDTSSNALFASLQATAAQQIGVSDVLMVAANTTGGVTGKMISPQSIAIAC
                     AAVGLVGKESDLFRFTVKHSLIFTCMVGVITTLQAYVLTWMIP"
     gene            13372..14148
                     /gene="lldR"
                     /locus_tag="MOX77_003023"
     CDS             13372..14148
                     /gene="lldR"
                     /locus_tag="MOX77_003023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator LldR"
                     /protein_id="HCA3358488.1"
                     /translation="MIVMPKRLSDEIASRVRALIEEQNLEAGMKLPAERQLALQLGVS
                     RNSLREALAKLVSEGVLVSRRGGGTFVRWQHETWSEQNIVQPLKMLMANDPDYSFDIL
                     EARHAIEASTAWHAAMRATAADKEKIRLCFDATLSEDPDLASQADVRFHLAIAEASHN
                     VVLLQTMRGFFDVLQSSVKQSRQRMYLVPPVFSKLTEQHQAVLDAILDGNAEGARKAM
                     MAHLSFVHTTIKRFDEDQARQARITRLPGDHNEMTRENKS"
     gene            14145..>14374
                     /locus_tag="MOX77_003024"
     CDS             14145..>14374
                     /locus_tag="MOX77_003024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hydroxy-acid oxidizing protein"
                     /protein_id="HCA3358489.1"
                     /translation="MIISATSDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQ
                     VALRQRVLKNMSDLSLETTLFNETLSMPVALAP"
BASE COUNT         3590 a         3791 c         3698 g         3295 t
ORIGIN      
        1 gtctaccggt aatgaaccgc tgccgatttg cgacagacag ggtttaacct ccagcgcaaa
       61 ttcatcgccg taacgtgccg ccaaccgcgc ctgtaaccgc tgcgcttgtt cgcgaatcga
      121 cgcttcactg cgggttaaca gacgcagggt gggtaatttc tccgccaacg cttccgggtg
      181 cagatacaga cgtaacgttg cctccagcgc cgccagcgtc attttatccg cgcgcagagc
      241 gcgtttcagc ggatggcttt gcagttgggc aatcatcgct tttttgccga cgatgatccc
      301 ggcctgcggc ccgcccaaca acttatcgcc ggagaagctt accaggctga cgcctgcggc
      361 aatgagctgt tgcggcatcg gctctttggg taagccatat tggcttaaat ccaccagcga
      421 accgctgccc agatccgcca ccaccggaat atccagctct cgcccgattt ccgccagttc
      481 cgcttcctct accgttttgg taaagccctc aatgctgtaa ttactggtat gcaccttcat
      541 caacagcccg gtattttcat ttaccgcctg acggtaatct ttcgcgtgcg tccggttggt
      601 ggtgcccact tcatgcagcg tacagcccgc ctggcgcata acatccggaa tacgaaacgc
      661 gccgccgatt tcgaccagtt cgccacgcga aaccaccacc tctttgccgc tggcggtcgc
      721 cgccagcatc agcaataccg ccgccgcatt gttattgacg atacaggcgt cctccgcccc
      781 ggtgatacgg cataacagcg tcgccagcgc ccggtcgcga tgcccccgcc cggcgccatc
      841 taaatcgtat tccagcgtca ccggcgcgcg catcgcctgc gttaccgcct caatcgcttc
      901 ttgcgcctgc aatgcgcggc caagattggt gtgcagcacc gtccccgtca ggttaatcac
      961 cgggcgcagc gcgctttgcg ccgcattttc cagccggagt ttcgcctctt gcgcccagtc
     1021 tgcgtaccag tcgggaagcg tttgcgtatt ccgtatgacg tcgcgcgcgt cgtcaagcat
     1081 ccgcctaagc agatcaacca cctgggtatg gccataccga tcgcgcagag aaagaaaggc
     1141 gctatcgtgc aataaacgat cgatagcagg aagctggctg tagagtgtac gcgtttcgct
     1201 tgtcatgaaa atgcctggct gttggtggcc ctctcctggc gggagaggga tatcgacata
     1261 agggggattg taacgtgagt ttgctcaggc ggacataatg cgcgtcaagc ctttggcgct
     1321 tcggtgcggg caaagctttc gcgttgaaaa agcgtttcga ccagtttgac caggtggggg
     1381 cggctaacac accagccggg cgcgacccgg cggaagttga gatagcctac cgcacaggca
     1441 atcgcgatag tcgccagatt gaccgtatcc gtttttagcg tcccgtcgct cagataactt
     1501 tcgagcatat ccaggctgcg gttgattttt tcccgctggc gcagcagttc cgtttccgat
     1561 tgttgcgccg ccgggcgcgc ctgttcgcgt acagacacca acgctgcatc cataatgccg
     1621 tcagccaacg cttcaagctg gcgaacttta agcgctgcca tcgggtcacg cgggagcatc
     1681 gctggcgcga tatccagcag ttcaatatat tccgcgatga tcggcgaatc gaaccagtac
     1741 tcccctttct ccgtcaccag cgctggcacc ttacccagag ggttgtattg cgccacgccg
     1801 ttatccgcct cgtaaggtag ttcattaata aattcgaagg taataccctt ttcgagcagc
     1861 agaacagaga ttttgcgcac aaaagggctg gtgtagctac cgatgagttt catgccgtgt
     1921 cctttttgcc aaccagtaaa aatcatagta tggctcaaat aagacgaaaa gagacacaaa
     1981 aggaagttgc tgaatgacat aacgtgagag ggctcgcgac aaaatgtttg tcggatcgta
     2041 ttgacgttac ccgggcttaa aatttcatgt gaagaggatc acaaaaattc aacaaagcac
     2101 caaaataaaa gtgtgaaata tctcacataa aatagccttt taagggctaa aaatgagatt
     2161 cgttgttttt ttacacagta actttgtgat caatatcaca taaattacct ctctacccct
     2221 atatttatgt gacgcaaatc acataaatta tccttgtctg gacagttgaa cgattcagtg
     2281 ccagattgcg cagtatctac actacagggt ccggctacct ctgccgctac attaacaaac
     2341 ctcgggcttt cagcctgcgc gacagcaaca taagaagggg tgtttttatg tcatccgata
     2401 ttaagatcaa agtgcaaagc tttggtcgat tcctcagcaa tatggtgatg cctaatatcg
     2461 gcgcgtttat cgcgtggggt attatcaccg cattatttat tccaacaggg tggttgccta
     2521 acgaaacgct ggcgaaactg gttggtccga tgatcaccta cctgctgccg ctgctcatcg
     2581 gttataccgg cggtcgtctg gttggcggcg aacgcggcgg cgtggtaggc gctattacta
     2641 ccatgggcgt tattgtcggc gcggatatgc cgatgttcct cggctcgatg atcgccggtc
     2701 cattaggcgg ctactgcatt aagaaattcg acagttgggt agacggtaag atcaaatccg
     2761 gttttgagat gctggtgaac aacttctccg ctggcatcat cggtatgatc ctcgccatcc
     2821 tggcgttcct cggtattggt ccggcggttg aagtcctgtc caaaattctg gcggcgggcg
     2881 ttaacttcat ggtggcgcac gatatgctgc cgctggcgtc catttttgtt gaaccggcga
     2941 aaatcctgtt cctcaataac gcgattaacc acggcatctt ctcaccgctg ggtatccagc
     3001 agtcccatga gatgggtaaa tccatcttct tcctgattga agctaacccg ggtccgggga
     3061 tgggcgtcct gctggcgtac atgttcttcg gtcgcggcag cgctaaacag tctgcgggcg
     3121 gcgcggcaat tatccacttc ctaggcggta tccacgaaat ttacttcccg tacgtgctga
     3181 tgaacccacg cctgattctg gcggtgattc tcggcggtat gaccggcgta ttcaccctga
     3241 ccatcctgaa cggcggtctg gtctctccgg cgtctccagg ctccattctg gcggtactgg
     3301 cgatgacgcc aaaaggcgct tacttcgcta acatcgcggc catcgtggcg gcaatggcgg
     3361 tctccttcgt ggtgtctgca attctgctga aaaccagcaa agtgaaagaa gaagatgata
     3421 ttgaagcggc cacccgtcgt atgcatgaca tgaaagcgga atctaaaggc gcctctccgc
     3481 tggcggctgg cgacgtcacc aatgacctca gccatgtgcg taaaatcatc gtagcttgcg
     3541 atgccggtat gggttccagc gcgatgggcg caggggtact gcgtaagaaa gtacaggatg
     3601 cgggtctgtc tcagatttcc gtcaccaaca gcgccattaa caatctgccg ccggatgtgg
     3661 atctggtcat tactcaccgc gacctgaccg aacgtgctat gcgtcaggta ccgcaggcgc
     3721 agcatatttc gctgaccaac ttcctggata gcggcctgta caccagcctg accgaacgtc
     3781 tggttgccgc acagcgccac aatactaatg aagagaaagt ccgcgatcat ctgaaagata
     3841 gctttgaaga gggcgataac aacctgttca agctgggcgc ggagaatatc ttcctgggcc
     3901 gtaaagccgc taacaaagaa gaggcgattc gctttgccgg tgaacaactg gtgaaaggcg
     3961 gctatgttga gccggaatac gtcgaggcga tgctggaccg cgaaaagctg acgccgactt
     4021 acctcggtga atccatcgcg gtaccgcacg gtaccgtaga agctaaagac cgcgtgctga
     4081 aaaccggcgt ggtgttctgc cagtatccgg aaggcgtacg cttcggtgaa gaagaagacg
     4141 atattgcccg tctggtcatt ggtatcgccg cacgtaacaa tgagcacatc caggtcatca
     4201 ccagcttgac caacgcgctg gatgatgaat ccgtgatcga acgtctggcg cacaccacca
     4261 gcgtggatga agtgctggaa ctgctggcag gtaaaaaagc ttaacagtta agtatcccca
     4321 aaatagttcg agctgcagga aggcggcaac gcagtgaatc cccaggagcg tacataagta
     4381 cgtgactggg gtgagcgagg agagccaacg catctgcagt tctaaatatg aaggcgatat
     4441 cctctctctt gtggagaggg ttaggttgag ggaaaagcct caccccagcc ctctcgggta
     4501 aaaacattaa tgaaggttaa tactatgaaa gcattacatt ttggcgcagg taatatcggt
     4561 cgtggcttta tcggcaaatt gctggctgac gcggggatac aactgacgtt tgcggatgta
     4621 aaccaggtcg tactcgatgc cctgaatgcc cgtcatagct atcaggttca tgttgtgggt
     4681 gaaaatgagc aggtggatac cgtttccggc gtcaacgctg tcagcagcat cggcgatgat
     4741 gttgtcgacc tgattgccca cgttgattta atcaccactg ccgtgggccc ggtggtgctt
     4801 gagcgtatcg caccggctat cgctaaaggg ctggtaaaac gtaaggcgca gggcgtggat
     4861 gccccgctga atatcatcgc ctgcgaaaat atggtgcgcg gcaccacgca gctgaaaggc
     4921 cacgtaatga acgcgctggc ggatggcgat aaagcctggg ttgaacagca cgtcggtttt
     4981 gtcgattccg ccgttgaccg tattgtgccg ccatctgctt ctgcgaccaa cgatccgctg
     5041 gaagtgacgg tagaaacctt cagcgagtgg atcgtcgata aaacccagtt taaaggcgcg
     5101 ttgccaaaca ttccggggat ggagttaacg gataacctga tggcatttgt cgaacgtaaa
     5161 ctcttcacgc tgaacacagg tcatgctata accgcgtacc tcggcaaatt agccggtcat
     5221 caaaccattc gcgacgccat tctcgatgag ggtattcgcg cggtggtgaa aggcgcgatg
     5281 gaagaaagcg gcgcggtgct gatcaaacgc tacggttttg atgccgacaa acatgcggca
     5341 tacattcaga aaatcctcgg tcgttttgaa aacccgtatc tgaaagatga cgtcgaacgc
     5401 gtaggccgtc agccgctacg caaactcagc gcgggcgacc gtctgatcaa accgctgctt
     5461 ggcaccctgg aatatggtct gccgcatgtg aatctggtga aagggatcgc ggcggcgatg
     5521 catttccgta gcgatgaaga tccgcaggca caagagttgg cggcgctgat taccgaaaaa
     5581 ggcccgcagg ccgcgctggc gcaaatttcc gggctggatg ccaatagcga tgtggtggcg
     5641 gaggcggtta acgcatataa cgcgaccaaa tgacgcagaa cccggcgcag gttagcctgc
     5701 gcccaaataa cagattgtca gatatgcagg caataatgga acaaacccag gcctttgaaa
     5761 atcgtgtgct tgagcgtctg aatgctggca aaaccgtacg gagcttcctg attaccgccg
     5821 tcgagttact gaccgaggcg gtgaatattc tggtgcttca ggtgtttcgc aaagacgact
     5881 atgccgtgaa atacgctgtg gaaccgttgc tggacggcga cgggccgctg ggcgatcttt
     5941 cggtacgtct gaaacttatc tatggcctgg gcgtactcag ccgcaccgaa tatgaagatg
     6001 cggagctgtt aatggcgctg cgcgaagagc tgaatcacga cggcaatgag tacgccttta
     6061 ccgacgatga aatcctcggg ccgtttggcg aactgcattg cgtcatggcg ctgccgccgc
     6121 cgccacattt tgatacatcc gacgcggcgc tatacgccat gcaaattcag cgctaccagc
     6181 aggcggtgcg ttcgacgatg gttctctctc tgaccgagct gatttctaaa atcagcttaa
     6241 aaaaggcctt tcaaaagtaa atcccgccgt taacctcttt cttcttttgg tcggtacagc
     6301 cgccggtaat attccagacg ctgcaaataa atgggcgtgc tctccgacgg cacttcggaa
     6361 ggaacataat cacgcggcgg cgttttattc aagtactcac ggaacgcctg gctggacgcc
     6421 ataaaatcga cggctttatc aataagaagt ggtacgttct cacctatttt tgccatgata
     6481 gatcctccat gtgtgatccg cgtctgactc ccgcggccgc ttatttgagt ttaggatcga
     6541 tttagcgtca tcattgagga aaatgtgctt aattgctttt cttgccgaca aaaaggcgtt
     6601 tcatcttttc tttcgaaaaa aagcacttta ttttcaaatg gataaataaa taattagcgg
     6661 tgtaatattt accataattg attatcgtta cgccatgagt tgtgaagaat cacccactgc
     6721 gcgcatacta tagggtatct atcccatttc tatcagaagc tatcccatga aagaagtcga
     6781 aaaaaacgaa attaaacgcc tgagcgatcg tcttgacgct attcgccacc agcaggcagg
     6841 tctctcgctg gttgaatccg ccgataaata cgcggagctg gaaaaagaaa aagagacgct
     6901 ggaagcagaa attatccgtc tgcgcgaagt acacagccag aaactgagta aagaagcgca
     6961 gaagctgatg aacctgccgt ttcgccgcgc tatcactaaa aaagagcagg ccgatatggg
     7021 caagttgaag aaaagcgtgc gtggtctgat cgtagtgcac ccgatgacgg cgctgggccg
     7081 ggaaatggga ctcaaagaga tgacaggttt cgcgaagagc gagttctaaa ccttccgcat
     7141 cccaggctct caagacaccc gttgtacgga gggtgtcttg aatgcatcgg gctatattcc
     7201 gaatttttcc tagaagtatt tacatcgttt atatacaagt tcatttttaa cggcaatccc
     7261 tgctttttca ggataaaaaa ttccactatc gtgcctgttt gtatttatac aatgaatttt
     7321 ttcatcctct tttctcataa cccgcagaat ataattgacc cgcgaaatta aataacatta
     7381 tcatccatga aaaaaaatgc tcatacataa atattataat tatattttta taaagcattg
     7441 ttatgagtaa ttgataaaca acgtcgggta tttgcacact cctatagaag caatgaatgt
     7501 tttcattata accatacgtt aatggctatt ggcaatgccc gcaaaatgat gagttggctg
     7561 tataaataat aggttaacta tttatattat ataaattatt aacaaggata ttttatatgt
     7621 acaaaaatgg aaaatttatc cccctgcttg ctttgggatt cacatttttt ttgtctggtt
     7681 gtgattactt cgcagataag caccttgttg aagaactgaa aaaacaacaa aaagaacaag
     7741 aagcaaagat aaacctgtta gaaaaacaac aaaaagaaca agaagtaaag ataaatttgc
     7801 cagaaaaaca acaaactacg gttatcaaca cgactcaaaa gatcgccgaa gtcgttggcc
     7861 gcgttgaacg caaacaacgg ctattcgact atacagaact ggacccatca caaacgcact
     7921 attttattat taacaacggc aatatcggat tagccgggcg tattctatct attgagccaa
     7981 tagataatgg aagtgttatt catcttgatt tagttaactt actcagcatt cccgtatcaa
     8041 accttgcgtt taatatgaca tggggtacga aaaaaccttc cgaggcaaaa gatctgcctc
     8101 gctggcgaca actcctgctc aacacgaaaa tggactcgac aatcgaactc ttaccgggag
     8161 catggacaaa cgtcacgcta acattaaaag gcgtatcgcc caataatctt aagtatctaa
     8221 aaataggtat tgacatggag aatgtcatat tcgacagcat acaacctatt aatgatacga
     8281 aaaagaagcc aaaaaaataa tagccattga tacaactatt ttagaaaagg aaagcactta
     8341 ttcatgaaca gaatatttaa agtcctctgg aatgccgcta cgggaacatt tattgtcacc
     8401 agcgagacgg caaaaagccg cggaaaaaaa agcggccgca gaaagctggc ggtttccgca
     8461 ctcgtcggtc ttagcagtat tatggtctct gcagatgcgc tggccaatgc agggaacgat
     8521 accggcagca ttaaccagaa caccactgat attgccacca acaccaccag tatcaacaat
     8581 ctgagcaact ccgtcaccac gctcaccgat gatgccctgc tttgggatgc agcctctggc
     8641 acattcagcg ccagccgtaa cggaagcgcc agcaaaatca ccaatctggc ggcaggcacc
     8701 ctggccgcgg acagcaccga tgcggttaat ggctcccagt tgtttgatac gaacgagaaa
     8761 gtggatcaga acaccgctga tatcaccacc aataccaaca gcatcaatca gaacaccact
     8821 gatattgcca ccaacaccac cagtatcaac aatctgagca actccgtcac cacgctcacc
     8881 gacgatgccc tgttatggga tgctgactct ggcacattca gcgccagccg taacggaagc
     8941 gccagcaaaa tcaccaatct ggcggcgggt accctggccg cggacagtac agacgccgtt
     9001 aacggctcac aattgtatga aaccaaccag aaggtggatc aaaacacctc tgctatcgca
     9061 gatattaata cgtccatcac caatcttagc tctgacaacc tgagctggaa tgaaacaacg
     9121 aattcgttct ctgccagcca cggaagtagt acgacaaaca aaatcaccaa cgttgctgcc
     9181 ggagagctgt ctgaagaaag taccgacgcg gttaacggat cgcagttgtt cgaaaccaat
     9241 gaaaaagtgg atcagaacac gaccgatatc gccgccaata ccaccaacat cactcagaac
     9301 agcaccgcga ttgagaacct gaatacttct gtctccgaca ttaatacgtc cattaccggc
     9361 ctcactgata acgctctgtt atgggacgaa gacaccggcg ctttcagcgc aaaccacggt
     9421 ggaagcacca gtaaaataac caatgtcgcc gccggggcgc tttctgagga cagtacagac
     9481 gcggtaaacg gatcacagtt gtatgaaacc aaccagaagg tggatcaaaa cacctctgct
     9541 atcgcggata tcaatacgtc catcaccaac cttggtaccg atgcactgag ctgggatgac
     9601 gaagagggtg cgttcagcgc cagccacggt accagcggta ccaataagat aactaatgta
     9661 gcagcaggtg aaatcgccag tgacagtact gacgccatta atggctctca gctctatgaa
     9721 actaacatgc tgatttctca gtataatgaa tctattagcc aactagccgg cgataccagc
     9781 gaaacctata tcacggaaaa tggtaccggc gtgaaataca tccgtacgaa tgataacggg
     9841 cttgaaggcc aggatgcata cgcaacgggt aacggcgcaa cggcagtagg ttacgacgcc
     9901 gtcgcctctg gcgctggctg tctggctctt ggccaaaaca gcagcagcag cattgagggc
     9961 agtatcgctt tgggcagtgg ctccacctct aaccgcgcta ttacaaccgg tatacgagaa
    10021 acgagcgcaa caagcgatgg cgtggtgatt ggctacaata caacagacag agagttgctg
    10081 ggcgcgttgt cattggggac ggatggagaa agctatcgtc aaattaccaa cgttgctgac
    10141 ggctctgaag cgcaagatgc ggtaacagtt cgtcagttac aaaatgccat tggtgcggtc
    10201 actactacac cgaccaagta ctaccacgca aactcaacgg aagaagattc actggctgtc
    10261 ggaactgact cactggcaat gggtgcgaag actatcgtca atgctgatgc aggtattggt
    10321 attggtctga atacactggt gatggctgat gccatcaacg ggattgctat cggttctaac
    10381 gcacgcgcca accatgcaaa cagtattgca atgggtaatg gttctcagac cactcgcggt
    10441 gcacagactg actacaccgc ctacaacatg gacacaccgc agaactctgt cggtgagttc
    10501 tctgtcggca gtgaagacgg tcaacgtcag atcactaacg tcgcggcggg ttcggcagat
    10561 accgatgccg ttaacgttgg tcaattgaaa gtaacggacg cgcaggtttc caggaatacc
    10621 cagagcatta ctaacctgaa tactcaggta tcgaatctgg atacccgcgt caccaatatc
    10681 gaaaacggca ttggcgatat cgtcactacc ggtagcacca agtacttcaa gaccaacacc
    10741 gatggcgcag atgcaaatgc ccagggtgcg gacagcgtcg cgattggctc tggctctatt
    10801 gctgccgctg aaaacagcgt ggcgttaggc acaaattccg tcgcagatga agctaatact
    10861 gtgtctgtcg gctcttctac tcaacaacgc cgtattacca acgttgccgc aggggtgaac
    10921 aacactgacg cggttaatgt ggcgcaactg aaagcctcag aagcaggctc cgtgcgttat
    10981 gaaaccaatg cagatggctc ggttaactat agcgtgctca acctgggaga cgggagtggc
    11041 ggcaccactc ggatcggcaa tgtttcagcg gcggtgaatg atacggatgc ggttaactat
    11101 gcgcaattga aacgcagcgt cgaagaagca aacacctata ccgaccagaa aatgggggaa
    11161 atgaacagca aaatcaaagg catagaaaac aagatgagcg gcggtatcgc ttcagcgatg
    11221 gcgatggccg gtctgccaca agcctacgcc ccgggcgcca acatgacctc gattgctggc
    11281 ggtacgttta atggtgaaag tgccgtcgcc attggtgtct ccatggtaag tgaaagcggg
    11341 ggctgggtgt ataaactgca aggaaccagc aacagccagg gcgattactc tgcagccatt
    11401 ggcgcgggct tccagtggta atgaagtaac aacactcccg acatcaaagg caatggcata
    11461 atgccattgc cttttcactt ccctttgtgg tcctctcctc tcaattggcc ctaccaattt
    11521 tagccagtta ccacagccta ctcacatttc actaaattaa ctctacaata tcgttgccaa
    11581 taaataacat ccggttaact atttgttgtc attatccata cacaacaata ttggcaggac
    11641 cacttttaca cataatgtga cttcaactag atgagcaaag attcatccca ttatgcgtgt
    11701 ggttctcagg agacctgcaa tgaacctctg gcaacaaaac tatgacccgg cgggtaatat
    11761 ctggctttcc agcctgatcg catcgctccc aatcctgttc ttctttttcg ccctgattaa
    11821 actcaagctg aaaggctatg ttgccgcttc gtggacggtg gttatcgcgc tcgccgtcgc
    11881 gctgctgttc tataaaatgc cggtcgatca cgcgctggca tcggtcgtgt atggcttctt
    11941 ctacgggcta tggccgatag cctggataat catcgccgcg gtctttgtct ataaaatttc
    12001 ggtcaagacc gggcagtttg acattattcg ctcgtcaatt ctgtcgatta cccccgacca
    12061 gcgtctgcaa atgctgattg tcggcttctg cttcggcgcg ttccttgaag gcgcggcggg
    12121 tttcggcgcg ccggtggcga taaccgctgc gctgctggtg ggcctgggct ttaaccctct
    12181 gtatgcggca gggctgtgcc tgattgtaaa caccgcgccg gtcgcctttg gcgcgatggg
    12241 tattccgatt ctggttgccg gacaggtcac ggacctggac agctttgaaa tcggtcagat
    12301 ggtaggccgc cagttgccgt tcctgaccat tatcgtgctg ttctggatta tggcgattat
    12361 ggacggctgg cgcggcgtga aagaaacctg gcctgcggtg atggtcgctg gcggctcgtt
    12421 tgctatcgcc cagtatctca gctccaactt tatcgggccg gaactgccgg acatcatctc
    12481 ttcactggtg tctctggtgt gtctgacgct gttcctcaaa cgctggcagc cggtacgcat
    12541 cttccgcttc ggcgatatgg gcgcgtcgca ggtcgatcag acgctggccc gcacccgtta
    12601 tacgacagga caaattgttc gcgcctggtc gccgttcctg ttcctgaccg ccacggtcac
    12661 gctctggagc ataccgccgt tcaaagcgct gtttgccccc ggcggcgcgc tgtatgactg
    12721 ggtaattaac gttccggtac cgtatctcga taaactggtc gcccgtatgc cgccggtcgt
    12781 acacgaagcg accgcttacg cggcggtgta taaatttgac tggttctccg ccaccggcac
    12841 tgcgatcctg tttgccgcgc tgttgtctat tgtctggctg aaaatgaaac cctcagccgc
    12901 aatccagacc tttggcagca cgctgaaaga gctggcgttg ccgatttact ccatcggcat
    12961 ggtgctggcg ttcgcgttta tctcgaacta ttccgggctt tcctccacgc tggcgttagc
    13021 gctggcgcac accggcagcg ccttcacgtt cttctcgccg ttcctcggct ggctgggcgt
    13081 cttcctgacc ggctcggata cctcatctaa cgcgctgttt gcctctctac aggctaccgc
    13141 ggcgcagcaa atcggcgtct ctgatgtact gatggtggcg gcgaacacca ctggaggcgt
    13201 aaccgggaag atgatctcgc cgcagtctat cgccatcgcc tgcgcggcgg tgggactggt
    13261 agggaaagag tccgatctgt tccgttttac cgtcaaacac agcctgatct tcacctgtat
    13321 ggtgggcgtg atcactacgc ttcaggccta tgttttaacc tggatgattc cgtgattgtg
    13381 atgccaaaac gcctgtcaga cgagattgcc tctcgcgtgc gggcgctgat tgaagaacaa
    13441 aacctggaag cgggcatgaa attgcccgcc gagcgccagt tggctctaca gcttggcgta
    13501 tcacgcaact ctttacgcga agcgctggcg aagctggtca gcgaaggcgt gctggtgagc
    13561 cgtcgcggcg gcgggacatt tgtccgctgg cagcacgaaa cctggtctga acagaatatc
    13621 gtgcaaccgc tgaaaatgct gatggcgaac gatccggact acagtttcga cattctggaa
    13681 gcccgccacg ccattgaagc cagtacggcc tggcacgccg ccatgcgtgc caccgccgcc
    13741 gacaaagaga aaatcagact ctgctttgat gcgacgctca gcgaagaccc ggatctcgcc
    13801 tcccaggccg acgtgcgctt tcatctggcg atcgcggaag cctcgcataa tgtggtgctg
    13861 ttgcaaacca tgcgcggttt cttcgacgtc ctgcaatcct ccgtcaaaca gagtcgccag
    13921 cgtatgtatc tcgttccgcc cgtattctca aagctgacgg aacaacacca ggcggtgttg
    13981 gacgccattc tggacggtaa cgccgagggc gcgcgtaaag cgatgatggc gcacctcagt
    14041 tttgtccaca ccacgattaa acgatttgat gaagaccagg cccgccaggc gcgcattacc
    14101 cgcctgcccg gcgaccataa tgagatgacc agggagaata aatcatgatt atttcagcaa
    14161 ccagcgatta tcgcgccgca gctcagcgca cgttgcctcc tttcctcttc cactacatcg
    14221 acggcggcgc gtatgcggaa tataccctgc gccgaaatgt ggaagacctg tcgcaagtcg
    14281 ctctgcgcca gcgcgtgctg aaaaatatgt ccgatttaag cctggaaacg accctgttta
    14341 acgaaacgtt gtcgatgccg gtggcattag cgcc
//
LOCUS       DAGWFR010000102        14332 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.104, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000102 DAGWFR010000000
VERSION     DAGWFR010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 14332)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14332)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14332
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.104"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..663
                     /locus_tag="MOX77_003025"
     CDS             <1..663
                     /locus_tag="MOX77_003025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HCA3358490.1"
                     /translation="RLEAIASLEDLGAGFALATHDLEIRGAGELLGEEQSGSMETIGF
                     SLYMELLENAVDALKAGREPSLEDLTSQQTEVELRMPSLLPDDFIPDVNTRLSFYKRI
                     ASAKNENELEEIKVELIDRFGLLPDPARNLLDIARLRQQAQKLGIRKLEGNEKGGTIE
                     FAEKNHVDPAWLIGLLQKQPQHFRLDGPTRLKFIQDLSERKTRIDWVRQFMQQLEENA
                     IA"
     gene            811..1593
                     /locus_tag="MOX77_003026"
                     /pseudo
     CDS             811..1593
                     /locus_tag="MOX77_003026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460185.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
     gene            complement(1699..1956)
                     /locus_tag="MOX77_003027"
     CDS             complement(1699..1956)
                     /locus_tag="MOX77_003027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1471 domain-containing protein"
                     /protein_id="HCA3358491.1"
                     /translation="MKNVKNLIAAAVLSSLSFASFAAVEVQATPEGQQKFGTISANGG
                     TNLGSLEDQLAQKAQEMGAKSFRITSVTGPNTLHGTAVIYK"
     gene            2198..2833
                     /gene="comR"
                     /locus_tag="MOX77_003028"
     CDS             2198..2833
                     /gene="comR"
                     /locus_tag="MOX77_003028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family copper-responsive transcriptional
                     repressor ComR"
                     /protein_id="HCA3358492.1"
                     /translation="MTTDTTSCAKKSRGRPKVFDREAALDKAMTLFWQHGYEATSLAD
                     LVEATGAKAPTLYAEFTNKEGLFRAVLDRYITRFASKHEAQLFCEEKSVESALEDYFT
                     EIAACFTSTDTPAGCFMINTSATLAASSRDIARTVKSRHAMQEQTLIQFLRQHQERGE
                     IPAHCNPQALAEYINCILQGMSISAREGATFEQLMQITRTTLRIWPELLKS"
     gene            complement(2907..3446)
                     /locus_tag="MOX77_003029"
     CDS             complement(2907..3446)
                     /locus_tag="MOX77_003029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper 2TM domain-containing protein"
                     /protein_id="HCA3358493.1"
                     /translation="MNKSMLAGIGIGVAAALGVAAVASLNVFDRGPQYAQVISAKPIK
                     ETVKTPRQECRNVTVTHRRPVQDENRIAGSVLGAVAGGVIGHQFGGGRGKDVATVVGA
                     LGGGYAGNQIQGSMQESDTYTTTQQRCKTVYDKSEKMLGYDVTYKIGDQQGKIRMDKD
                     PGTQIPLDGNGQLVLNNKA"
     gene            complement(3623..4927)
                     /gene="ndh"
                     /locus_tag="MOX77_003030"
     CDS             complement(3623..4927)
                     /gene="ndh"
                     /locus_tag="MOX77_003030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017384716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone dehydrogenase"
                     /protein_id="HCA3358494.1"
                     /translation="MTTPLKKIVIVGGGAGGLEMATQLGHKLGRKKKAKITLVDRNHS
                     HLWKPLLHEVATGSLDEGVDALSYLAHARNHGFQFQLGSVMDIDREAKTITIAELRDE
                     KGELLVPERKIAYDTLVMALGSTSNDFNTPGVKEHCIFLDNPHQARRFHQEMLNLFLK
                     YSANLGANGKVNIAIVGGGATGVELSAELHNAVKQLHSYGYKGLTNDALNVTLVEAGE
                     RILPALPPRISSAAHNELTKLGVRVLTQTMVTSADEGGLHTKEGEYIQADLMVWAAGI
                     KAPDFMKEIGGLETNRINQLVVEPTLQTTRDPDIYAIGDCASCARPEGGFVPPRAQAA
                     HQMATCAMNNILAQMNGKPLKAYQYKDHGSLVSLSNFSTVGSLMGNLTRGSMMIEGRI
                     ARFVYISLYRMHQIALHGYFKTGLMMLVGSINRVIRPRLKLH"
     gene            complement(5182..5724)
                     /locus_tag="MOX77_003031"
     CDS             complement(5182..5724)
                     /locus_tag="MOX77_003031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HCA3358495.1"
                     /translation="MIIYLHGFDSNSPGNHEKVLQLQFIDPDVRLVSYSTRHPKHDMQ
                     HLLKEVDKMLQLNVDERPLICGVGLGGYWAERIGFLCDIRQVVFNPNLFPYENMEGKI
                     DRPEEYADIATKCVTNFREKNRDRCLVILSRHDEALDSQRSAQALHPFYEIVWDEEQT
                     HKFKNISPHLQRIKAFKTLG"
     gene            complement(5749..6774)
                     /gene="nagZ"
                     /locus_tag="MOX77_003032"
     CDS             complement(5749..6774)
                     /gene="nagZ"
                     /locus_tag="MOX77_003032"
                     /EC_number="3.2.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HCA3358496.1"
                     /translation="MGPVMLNVEGCELDAEEREILAHPLVGGLILFTRNYHDPEQLRE
                     LVRQIRAASRNHLVVAVDQEGGRVQRFREGFTRLPAAQSFFALHGLEEGGRLAQEAGW
                     LMASEMIAMDIDISFAPVLDVGHISAAIGERSYHADPAKALAMATRFIDGMHDAGMKT
                     TGKHFPGHGAVTADSHKETPCDPRPETDIRGKDMSVFRALISENKLDAIMPAHVIYRA
                     IDPRPASGSPYWLKTVLRQELGFDGVIFSDDLSMEGAAIMGSYAERAQASLDAGCDMI
                     LVCNNRKGAVSVLDNLSPIKAERVTRLYHKGSFSRRELMDSARWKTASAQLNQLHERW
                     QEEKAGH"
     gene            complement(6785..7609)
                     /gene="thiK"
                     /locus_tag="MOX77_003033"
     CDS             complement(6785..7609)
                     /gene="thiK"
                     /locus_tag="MOX77_003033"
                     /EC_number="2.7.1.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine kinase"
                     /protein_id="HCA3358497.1"
                     /translation="MRSNNNNPLTRDEILSRYFPQYRPAVAASQGLSGGSCIIAHDTH
                     RIVLRRHHDPDAPPAHFLRHHRALSQLPASLAPRALFYTPGWMAVEYLHGVVNSALPD
                     ADELAALLYHLHQQPRFGWRIALSPLLAQYWSCCDPARRTPFWLRRLKQLQKNGEPRP
                     LRLAPLHMDVHGDNIVLTSAGLRLIDWEYAGDGDIALELAAVWVEDERQHRQLADAYA
                     ARARIDARQLWRQIRLWHPWVIMLKAGWFEYRWRQTGEQQFIRLADETWRQLRMKG"
     gene            complement(7590..8228)
                     /gene="lpoB"
                     /locus_tag="MOX77_003034"
     CDS             complement(7590..8228)
                     /gene="lpoB"
                     /locus_tag="MOX77_003034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator LpoB"
                     /protein_id="HCA3358498.1"
                     /translation="MTKMHRYAAIAALAIFLSGCMAQRQPAPVEEVKPAPEQPAQPPQ
                     PPVVPSVPTIPQQPGPIEHEDQTGQPAPKVRHYDWNGAMQPLVSKMLQADGVTARSVL
                     LVDSVNNRTNGSLNANEATETLRNALANNGKFTLVSVQQLAMAKQQLGLSPQDSLGTR
                     SKAIGIARNVGAQYVLYSSASGNVNAPALQMQLMLVQTGEIIWSGKGAVQQQ"
     gene            complement(8242..8616)
                     /locus_tag="MOX77_003035"
     CDS             complement(8242..8616)
                     /locus_tag="MOX77_003035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcfL family protein"
                     /protein_id="HCA3358499.1"
                     /translation="MIKGCIAVSLGLLLLTGCRSHPEIPVSDAQSLVMESAVLAAGVT
                     AEPPELTASDIQPSASSRVYNERQEPITVHYRFYWYDARGLEMHPLEAPRSVTIPARS
                     SVTLFGSANYLGAHKVRLYLYL"
     gene            complement(8619..8978)
                     /gene="hinT"
                     /locus_tag="MOX77_003036"
     CDS             complement(8619..8978)
                     /gene="hinT"
                     /locus_tag="MOX77_003036"
                     /EC_number="3.9.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine nucleoside phosphoramidase"
                     /protein_id="HCA3358500.1"
                     /translation="MAEETIFSKIIRREIPSDIVYQDELVTAFRDISPQAPTHILIIP
                     NILIPTVNDVTAEHEQALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHM
                     HLLGGRPLGPMLAHKGL"
     gene            9320..11495
                     /gene="fhuE"
                     /locus_tag="MOX77_003037"
                     /pseudo
     CDS             9320..11495
                     /gene="fhuE"
                     /locus_tag="MOX77_003037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460174.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ferric-rhodotorulic acid/ferric-coprogen
                     receptor FhuE"
     gene            complement(11580..13013)
                     /gene="ptsG"
                     /locus_tag="MOX77_003038"
     CDS             complement(11580..13013)
                     /gene="ptsG"
                     /locus_tag="MOX77_003038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucose transporter subunit IIBC"
                     /protein_id="HCA3358501.1"
                     /translation="MFKNAFTNLQKAGKSLMLPVSVLPIAGILLGVGSANFSWLPAVV
                     SHVMAEAGGSVFANMPLIFAIGVALGFTNNDGVSALAAVVAYGIMVKTMAVVAPLVLH
                     LPAEEIAAKHLADTGVLGGIISGAIAAYMFNRFYRIKLPEYLGFFAGKRFVPIISGLA
                     AIFTGVVLSFVWPPVGTAIQAFSQWAAYQNPVVAFGIYGFIERCLVPFGLHHIWNVPF
                     QMQIGEYTNAAGQVFHGDIPRYMAGDPTAGMLSGGFLFKMYGLPAAAIAIWHSAKPEN
                     RAKVGGIMISAALTSFLTGITEPIEFSFMFVAPILYIIHAILAGLAFPICILLGMRDG
                     TSFSHGLIDFIVLSGNSSKLWLFPIVGAGYAIVYYTVFRVLIKALDLKTPGREDSTDD
                     AKAGATSEMAPALIAAFGGKENITNLDACITRLRVSVADVAKVDQAGLKKLGAAGVVV
                     AGSGVQAIFGTKSDNLKTEMDEYIRNS"
     gene            complement(13308..14105)
                     /locus_tag="MOX77_003039"
     CDS             complement(13308..14105)
                     /locus_tag="MOX77_003039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HCA3358502.1"
                     /translation="MFLVDSHCHLDGLDYQSLHKDVDDVLAKAAARDVKFCLAVATTL
                     PGYRHMRELVGKRDNVVFSCGVHPLNQDEVYDVEELRLLAAEDDVVAMGETGLDYFYT
                     PETKIRQQASFIHHIQIGRELHKPVIVHTRDARADTLAILREEKVTDCGGVLHCFTED
                     RETAGKLLDLGFYISFSGIVTFRNAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKE
                     NQPAMVRDVAEYMAVLKGVAVEELAQITTDNFARLFHIDASRLSSIR"
     gene            complement(14116..>14332)
                     /locus_tag="MOX77_003040"
     CDS             complement(14116..>14332)
                     /locus_tag="MOX77_003040"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460171.1"
                     /note="catalyzes the DNA-template-directed extension of
                     the 3'-end of a DNA strand; the delta' subunit seems to
                     interact with the gamma subunit to transfer the beta
                     subunit on the DNA; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HCA3358503.1"
                     /translation="YLTNVDADAVVAALAGPLSPARIQAILNDVCHCRDQLLHVTGLN
                     RELVLTDLILRIEHYLQPGTLLPVPHL"
BASE COUNT         3496 a         3969 c         3587 g         3280 t
ORIGIN      
        1 cggctggagg cgattgcgtc gctggaggat ttaggcgccg ggtttgcgct ggcgacccac
       61 gatctggaga tccgcggcgc gggcgagctg cttggcgaag agcaaagcgg ctcaatggaa
      121 accattggct tctcactcta catggaattg ctggaaaacg ccgttgatgc gctgaaagca
      181 ggccgcgaac cctcgctgga agatctcacc agtcagcaaa cggaagtcga gctgcgaatg
      241 ccgtcgttac tgccggatga ttttattccg gatgttaata cccggctgtc attctataaa
      301 cgcattgcca gcgcgaagaa cgaaaacgag ctggaagaga tcaaagtgga attgatcgac
      361 cgcttcggcc tgctgcccga tccggcgcgt aatctgctgg atatcgcccg cctgcgccaa
      421 caggcgcaaa agctcggcat ccgaaaactg gagggtaacg agaaaggtgg aacgattgag
      481 ttcgccgaga aaaaccacgt tgaccccgcc tggcttatcg ggttactgca aaaacagccg
      541 cagcatttcc gtctggatgg cccgacgcgc ctcaagttta ttcaggattt aagcgaacgt
      601 aaaacgcgta tagactgggt acgccagttc atgcagcaac tggaagaaaa cgctattgca
      661 taagcgtcag gccgggcgtc attactctgc gcccggccta atctttacaa attctttgca
      721 cttccctgca gttccagaca cagccaaccg ccataattct tatttcctct tttataaaaa
      781 taaccacata ataatcatgg gcttattata atgttcaaca atacgcgact ctctcgctgg
      841 tgggcgttgc ttgcgcttac cgcgaccatc atgcttgccc ttcccgcgca ggcgaatacg
      901 tggcctcttc cgccccccgg cagtcgactg gtgggagaaa ataaattcca tgtcgttgaa
      961 gacgacggcg gctcgctgga ggcgatcgcc aaaaaatata acgtgggctt tttagccctg
     1021 ttacaggcca accccggcat tgatccttac gtgccacgcg caggcagcgt gctgacgatt
     1081 ccgctgcaaa cgctgctacc ggacgcgcca cgtgaaggta tcgtcattaa cctcgctgaa
     1141 ttacggcttt actattatca accggggaaa aatacggtca cggtctaccc tatcggcatt
     1201 ggccaactgg gcggcgatac cctgacgcca acgatggtga cgaccatttc ggataaacgc
     1261 gccaatccaa cctggacgcc gaccaccaat attcgcgccc gttataaagc gcaaggcatc
     1321 gatctccccg ccgtggtgcc tgccggtccc gataacccaa tggggcatca cgcgattcgt
     1381 ttagcggcct acggcggcgt ctatctgtta catggcacga atgccggttt tggcattggt
     1441 atgcgcgtca gttccggctg tatccgtctg cgcgacggtg atatagagac attgttccgt
     1501 caagtcacgc cgggaaccaa agtgaatatt atcaatacgc cgattaaagc ctcggtggag
     1561 ccaggcggcg tgcgactggt ggaagttcat cagtcgctgt aagcgtgaat agctgactga
     1621 caaaaaagcc tcgcgatgca tcgcgaggct ttctcttttt attgtggcaa tcgcagcggc
     1681 attaatgagg gttaatgctt acttatagat taccgccgta ccgtggaggg tattcgggcc
     1741 ggtaacagag gtaatacgga aagacttcgc ccccatttcc tgcgcttttt gcgccagctg
     1801 atcttccagc gagcccagat tcgtgccgcc attcgcggaa atggtgccga acttctgttg
     1861 accttctggc gttgcctgaa cttcaacggc ggcgaagctg gcgaatgaga gcgaactcag
     1921 taccgcagca gcgatgaggt tttttacgtt tttcatagtg atgaccttta gcagatgaat
     1981 gggtgtcgca agcattaact taacgatcga taaattaatc atagatgtga tctacatcac
     2041 acgtcaacct ctttttataa tgatcgttat ataatttata aagatgttat ttttcatgtg
     2101 aatagaattg atttattttt ctaatgaata ctctggagcc agaagtggtt tgtttttata
     2161 atagagagac cgctctttaa acaggtacaa cggcatcatg acaacggata ccacgagttg
     2221 cgcgaagaaa agccgtggcc gaccaaaagt gttcgacagg gaagccgcgc ttgataaggc
     2281 catgactctc ttctggcagc acggctatga agcaacttcg cttgccgatc tcgtagaggc
     2341 taccggggcg aaagcgccta ctctctatgc ggaattcact aacaaagaag gattatttcg
     2401 cgctgtcctg gatcgctaca tcactcgctt tgcctcaaaa cacgaagccc agctcttttg
     2461 tgaagagaaa agcgtagaat cggcgctgga agattacttc acagaaattg ccgcctgctt
     2521 taccagtaca gacacgccgg ctggctgctt tatgattaat acgtccgcca ccctggccgc
     2581 ctcctcgcgc gatatcgccc gcacggtaaa atcacgccac gccatgcagg aacagacgct
     2641 catccagttt ctgcgccaac atcaggagcg cggtgaaatt ccggcgcact gtaacccgca
     2701 ggcgctcgcg gaatatataa actgtatttt acagggaatg tcgatcagcg cccgtgaagg
     2761 tgccaccttc gaacaactga tgcaaattac gcgtacgact ctgcgcatct ggcctgaact
     2821 gctcaagtcc tgaacgacgc ggcttcggat aaaaaaagcc cctcagcctg agcgaatgag
     2881 gggctaactt gcagagtaca gcttttttat gctttgttat tcagaaccag ttgaccattg
     2941 ccgtcgaggg gaatttgcgt tccggggtct ttatccatgc ggattttgcc ctgctgatcg
     3001 ccaattttgt aggtcacgtc gtagccaagc atcttttcag atttgtcata caccgtctta
     3061 cagcgttgct gcgtggtagt gtaggtatca ctctcctgca ttgatccctg gatttgattg
     3121 ccagcataac cgccgcccag cgccccgacg accgtcgcca catctttacc acgaccgccg
     3181 ccaaattgat gtccaatcac gccgcctgct actgcgccaa gcaccgagcc ggcaatacgg
     3241 ttttcgtcct gaaccggtct acgatgcgtg accgtgacat tacggcactc ctgacgcggc
     3301 gtttttaccg tctctttaat cggtttagcc gatatcacct gcgcatactg cggaccacga
     3361 tcaaatacgt tgagactggc cactgccgcc acacccagcg cagccgctac gccaatccct
     3421 atacccgcca acattgattt attcacggga gttcctcctt cgttgctatt ggtaacaatt
     3481 ttgcaaccag tatgcgaaca aagccaatcg gaatgaggat gaaaaatgcg ggatgaggcg
     3541 gtaaagctga aggattcgga caactccgaa gcaagtgatg gagaagcgct caccggcgag
     3601 cagccggtga ggcgcagaaa aattaatgca gtttcaggcg cggacgaatg acgcggttaa
     3661 tactgcccac cagcatcatc aggccggttt taaagtatcc atgcagcgct atctggtgca
     3721 tacggtatag cgagatatac acgaagcggg cgatacgtcc ttcaatcatc attgaaccgc
     3781 gggtcaggtt ccccatcaga ctacccacgg tagagaagtt ggacagagag accagcgatc
     3841 catgatcttt atactggtaa gctttcagcg gcttgccatt catctgcgcc agaatgttat
     3901 tcatcgcgca ggtagccatc tgatgcgccg cctgagcgcg aggcggcaca aaacctccct
     3961 ccggacgtgc gcaggaagcg cagtcgccaa tcgcataaat atcaggatca cgcgtggttt
     4021 gcagcgtcgg ttccaccacc agttggttaa tgcggttcgt ttccagacca ccaatttctt
     4081 tcataaaatc tggcgctttg atacccgccg cccacaccat cagatcggcc tgaatatatt
     4141 caccttcttt cgtatgcaga ccgccttcgt cggcgctggt gaccatagtt tgcgtcagta
     4201 cgcgaacgcc cagtttggtc agttcattat gcgcggcgct ggagatacgc ggcggcaacg
     4261 caggcagaat acgctcgcca gcctcaacca acgtcacgtt caacgcgtcg ttggtcagcc
     4321 ccttataacc atagctatgc agctgtttta ccgcattatg cagttcagcc gacagctcaa
     4381 cccccgtcgc accgccgcca acgatggcga tattgacctt accgttcgcg cccaggttag
     4441 ccgaatactt gaggaacagg ttcagcatct cctggtgaaa acggcgcgcc tgatgcgggt
     4501 tatcgaggaa gatacagtgc tctttcacgc ccggcgtgtt gaaatcatta gaggtgctgc
     4561 ccagcgccat caccagcgtg tcatacgcga ttttgcgctc cggcaccagc agttcgccct
     4621 tttcatcacg caactcggca atggtgatgg tcttcgcttc gcgatcgata tccatcaccg
     4681 accccagctg gaactggaaa ccatgattac gcgcatgagc cagatagctc agcgcatcca
     4741 cgccttcgtc cagagagcca gtcgccactt cgtgcagcaa tggtttccac agatggctgt
     4801 gatttctgtc taccagcgtg attttcgctt ttttcttgcg ccccagttta tggcctaact
     4861 gcgtcgccat ttccagcccg ccagcgccgc cgccgacaat cacgatcttt tttaatggtg
     4921 tagtcaacgt gaccccctta aatttattaa ccaattgtta attaaaagtt attagtatag
     4981 cctttaatta acaacaagtt acgttaatga gaataagctt ctgatatgag aatagcatga
     5041 acggtgcatt ggtcatacca aaattgatgt gcatcaagtt ttcatgctga aaagatagac
     5101 agtttgcgag aattgagcat aaaaaaacca gccgcaaggc tggttatccg gtcactgata
     5161 acgccatatt gccggatggc gttaccccag cgttttaaac gctttgatac gttgcaagtg
     5221 cggcgaaata tttttgaatt tgtgagtctg ttcctcatcc cacacaattt cataaaacgg
     5281 gtgaagcgct tgcgctgagc gttggctgtc cagcgcttcg tcatgacgcg agaggatcac
     5341 cagacaacga tcgcgatttt tttcgcgaaa gttggtcacg cactttgtag cgatgtccgc
     5401 atattcttcc gggcgatcga ttttcccctc catgttttca taggggaaca ggttcgggtt
     5461 aaaaaccacc tgacggatat cgcacaaaaa gccaatccgc tccgcccagt aaccgcccag
     5521 ccctacgcca cagattaaag ggcgctcgtc cacattcaac tgcaacattt tgtccacttc
     5581 tttcagcaga tgctgcatat cgtgcttagg atgccgcgta ctgtagctta ccagccgaac
     5641 atccgggtcg ataaattgta attgcaacac tttttcatgg ttacccggac tatttgaatc
     5701 aaaaccgtgt aaataaataa tcatctggca ccctcacgaa aactcgagtt aatgacctgc
     5761 tttttcttcc tgccagcgtt catgtaactg gttgagctgg gcgctggctg ttttccagcg
     5821 tgctgagtcc atgagctccc ggcgtgaaaa tgaaccttta tgatacaaac gtgtaacacg
     5881 ttctgctttg atcggcgaca gattatccag cacgctgact gcgcctttac gattattgca
     5941 gaccagaatc atatcgcaac ccgcatccag cgacgcctga gcgcgctcag catagctgcc
     6001 cataatcgcc gcgccctcca tagacagatc gtcggagaaa atgacgccgt caaagcctag
     6061 ctcctgacgc agcaccgttt tcagccagta cggcgaaccg cttgccggac gcggatcgat
     6121 agcgcggtag atcacgtggg caggcataat cgcatccagt ttattctcac taatcagcgc
     6181 gcggaacacc gacatatctt tgccacggat gtccgtttca ggacgtggat cgcacggcgt
     6241 ctctttgtgg gagtccgccg tgaccgcgcc gtggccgggg aaatgcttac cggtcgtttt
     6301 catcccggcg tcatgcatgc cgtcaataaa gcgtgttgcc attgccaacg cttttgcggg
     6361 atcggcatga taagaacgct cgccaattgc cgcgctgata tgcccaacgt ccagcactgg
     6421 cgcaaaactg atatcaatat ccatcgcgat catttcgctg gccatcagcc accctgcctc
     6481 ctgcgccagt cgccccccct cttccagccc atgcagcgca aaaaaagatt gcgccgcggg
     6541 caggcgggta aacccttcac ggaaacgctg tacgcgcccg ccttcctgat cgacggccac
     6601 caccagatgg ttacgcgatg ccgcccgaat ctggcgcact aattcgcgca gctgttccgg
     6661 gtcatggtaa ttacgcgtga acagaataag cccgccaacc agcggatgcg ccagtatctc
     6721 gcgctcctcc gcatccagct cacatccttc gacattcaac attactgggc ccacactgct
     6781 ctccttatcc tttcatacgt agctggcgcc aggtttcatc ggccagcctg ataaattgtt
     6841 gctcgccggt ttgtcgccag cggtattcga accaccctgc ttttagcata atgacccagg
     6901 ggtgccataa tcgtatctgt cgccatagct gccgggcgtc gattcgcgcg cgcgcggcat
     6961 aagcgtctgc cagttgtcgg tgctggcgtt catcctcaac ccatactgcc gccagctcca
     7021 acgcaatatc gccgtcgccg gcatactccc agtcaatcag tctcaacccg gcggacgtta
     7081 atactatatt gtcgccatgg acatccatat gcaaaggcgc gagccgcagc gggcgaggtt
     7141 caccgttttt ttgcaactgt ttgagccgcc gcaaccaaaa cggcgtacgc cttgccggat
     7201 cgcaacacga ccagtactgc gccaatagtg gcgatagcgc gatacgccag ccaaaacgcg
     7261 gctgttgatg caaatgatac agtaaggccg ccagttcgtc ggcatctggc agagcggaat
     7321 ttaccacacc atgcagatat tctaccgcca tccagcctgg cgtataaaaa agcgctcgcg
     7381 gcgccagact ggccggcaat tgggataagg cgcggtgatg acgtaaaaaa tgggctggtg
     7441 gagcgtcggg gtcgtgatga cggcgcagca cgatacggtg agtatcgtga gcaataatac
     7501 agctcccgcc gcttagcccc tgcgatgcgg cgacggcggg acgatactgg ggaaaatagc
     7561 gcgacaggat ctcgtcgcgc gttaagggat tattgttgtt ggaccgcacc tttacctgac
     7621 cagattatct cgccagtttg caccagcatt aactgcatct gtaatgcagg cgcgttaacg
     7681 ttaccggatg cgctggagta aagtacatat tgcgccccga cattgcgcgc aatgccaata
     7741 gctttactgc gcgttcccag actatcctgc ggagacaacc ctaactgctg ttttgccatc
     7801 gcgagttgct gtacggagac cagcgtaaat ttaccgttgt tcgccagcgc attacgtaac
     7861 gtttccgttg cctcgttcgc atttaacgac ccattcgtcc ggttattcac gctgtcgaca
     7921 agcaatacgc ttctggccgt cacgccatca gcctgcaaca ttttgctgac cagcggttgc
     7981 atcgcgccgt tccagtcata gtggcgcacc ttaggcgctg gctggcccgt ttgatcttca
     8041 tgttcgatcg gccccggttg ttgtggaatc gttggcacag acggcacaac aggaggctgc
     8101 ggcggctgcg cgggttgttc tggcgctggt tttacctctt caactggcgc aggttgacgt
     8161 tgcgccatac acccggagag aaatatcgcc agcgcagcaa tggcggcgta gcgatgcatt
     8221 tttgtcatca aaattcactc ctcacaaata aagataaagc ctgaccttat gcgcccccag
     8281 ataattggcg ctgccaaata gcgttaccga cgaacgcgcg ggtatggtta cgctacgcgg
     8341 cgcctccagc ggatgcatct ccagcccccg cgcgtcatac cagtaaaacc gataatgaac
     8401 ggttatgggc tcttgccttt cgttatagac gcgggaagaa gctgatggct ggatatcaga
     8461 cgccgtcagt tcaggcggct ctgcggtgac acccgccgcc agaaccgcgg actccatcac
     8521 cagcgactgc gcgtcgctta ccggaatttc aggatgtgac cggcagccgg taagcagcag
     8581 caagcccaga gaaaccgcga tgcatccttt gatcatactt acaagccttt atgcgccagc
     8641 atcgggccta gcgggcggcc gcccagtagg tgcatatgga tatgataaac ctcctggccc
     8701 ccatgacggt tggtattcat gattaaacga tacccatctt cggcaatgcc ttcttgttca
     8761 gcgattttcg ccgccacggt gatcatccga cctaacgcct gttcatgttc cgccgtcacg
     8821 tcattgacgg ttgggatcag gatattggga ataatcaaga tatgcgtcgg cgcctgcggt
     8881 gaaatatcac gaaaggcggt gaccagctca tcctgataaa cgatatccga agggatttca
     8941 cgacgaataa ttttgctgaa tatagtttct tctgccacga cgttttcctt tttcataata
     9001 gcccttgcag cgcacatgct acgccgagcc atactgcgag tatagagtat gagcgagtta
     9061 ccgacgctct ttcaacttta acccacgatt tattaagcga aaaatgacta catgctggac
     9121 ttaccgccat atccccctgc catgacgcct ttgtacgctt aaaaaatatt tctagtttcc
     9181 ctggttatac cgttttacac atttaataca aatgcgtata tttctcattt gcatttttat
     9241 acgcattaac tagcaaagaa tgaaaaggtt caacgtcata cgtcctgaac ttaccccaat
     9301 aacaagcaag gattttcaga tgtctttcat tcaataccgc cgggacaaac accttccgtc
     9361 caccgccgca ccgtcgctgt tagctatggg tatggcgatg gcatttatgc ctgccgcctt
     9421 cgcggctgag gataccgtta ttgtcgaagg cgcgacgacc gctgacgcca taaaccgtga
     9481 agaacaggat tacagcgtga aaacgaccgc agcgggcacc aaaatgccga tgactcagcg
     9541 cgatatcccg cagtcggtca gtattgtcag ccaacagcgt atggaagacc agcagttgca
     9601 aaccctgggc gaggtgatga ccaatacgct ggggatcagc ggaagccagg ctgactccga
     9661 tcgcatcagc tattactcgc gcgggtttga aattgacaac tatatggttg acggtattcc
     9721 aacgtatttt gagtcccgct ggaatctggg cgatgcgcta acggataccg cgctgtatga
     9781 gcgcgtggag gtggttcgcg gcgcgaatgg gctgatgacc ggaaccggca atccttctgc
     9841 ctcaattaat atgatccgta aacacgccac cagtcgggag ttcaaaggta acgtctccac
     9901 agaatacggt agctggaata agcagcgtta cgtcatggat ctgcaaagtc cgctcaccgc
     9961 agacggtaat gtccgtgggc gcatcgtggc gggttatcag aataatgatt cctggctgga
    10021 ccgctataac agtgagaaag cgttcttttc cggaattatc gatgccgatc tgggtgcaac
    10081 taccaacctt tcagccggtt atgaatatca aaaaattgat gtcaacagcc cgacctgggg
    10141 cggtctgccg cgctggaata ccgatggcag caaaaatagc tatgaccgcg cgcgtagtac
    10201 cgccccggac tgggcttata acaataaaga gataaataaa ttcttcgtca cgcttaagca
    10261 gcgttttgcc gaaagctggc aggcgaccct gaatgcgacc catactgagg gtcaaattcg
    10321 acagtaaaat gatgtatatc gatgctttag tggataaaga gacaggtacg ctggtgagtc
    10381 cttatggcgc aagctacccc gtggtcggcg gtactggctg gaacagcggc aagcgcaaag
    10441 tagatgccat agatctcttt gctgatggcg cttatgagct gtttggccgt cagcacaata
    10501 tgatgtttgg cggcagttat agtaaacaga ataaccgcta ttttagcgcc tgggcgaacg
    10561 tctttccgga cgacattggc aacttcggcg cctttaacgg taatttcccc caaacccact
    10621 gggcgccaca aaatctggcg caggacgata ccacgcatat gaaatcgctg tatgccgcta
    10681 cgtgcatttc gctggccgac ccgctgcatc tgattcttgg cgctcgttat accaactggc
    10741 gtgttgatac actgacctac agcatggaga aaaaccatac cacgccgtat gccgggctga
    10801 tttatgatat caacgacaac tggtccgctt atgccagtta tacctctatc tttcagccgc
    10861 agaataaacg cgacaaagcg ggtcaatatc tggctccgat taccggtaat aactatgaag
    10921 cgggcctgaa gtccgactgg atgaacagcc gcctcaccac tacgttgtcc gtgttccgca
    10981 ttgagcagga taatgtcgct caagcaacca ctattcccat ccctggcagt aatggggaat
    11041 ttgcctggaa gtctactgac ggaacggtga gcaaaggcgt cgaatttgaa gtgaacggcg
    11101 caattaccga taactggcag atgactttcg gggctacccg gtatgttgcc gaggacaatg
    11161 aaggtaacgc cgtgaaccct aatctcccgc gcaccagcgt gaagttattc acccgctatc
    11221 gtctgccggc gataccggag ctgacggtcg gcggcggcgt gaactggcag aatcgggttt
    11281 acaaagatac cacgacgcca tacggcacct tccgcgccga acagggcagc tatgcgctgg
    11341 tcgatctgtt tacccgctat caggtgacga aaaatttctc cgtacaggga aacatcaaca
    11401 acctgttcga taaaacctac gacaccaata ttgatagttc cattgtttac ggcgcgccgc
    11461 gtaacgtcag cctcaccgcc aactatcagt tctgacagac tgtcggagag cgtcatgtaa
    11521 agcgccatta aaaaaggcag ccgaatggct gccttaatac tccccaacat cattactgct
    11581 tagctgttac ggatgtactc atccatttcc gttttcaggt tatcggattt cgtaccgaaa
    11641 atagcctgaa cgccggaacc cgcgacgaca acgcctgccg cgcccagttt cttcaggcca
    11701 gcctgatcca ctttcgctac atcggctacg ctcacgcgca gacgcgtgat acaggcatcc
    11761 aggttagtga tgttctcttt accgccaaac gccgcaatca aagccggcgc catttcgctg
    11821 gtagcgcccg cttttgcgtc atcagtagag tcttcacggc ccggcgtttt cagatccagc
    11881 gctttgatca gcacgcggaa cacggtgtag tacacaatcg cataaccggc gccaacaatc
    11941 gggaacagcc acaatttgct gctgttaccg gacagcacga taaagtcgat cagaccgtgg
    12001 gagaacgacg taccgtcacg catccccagc aggatacaga tcgggaatgc cagacctgcc
    12061 agaatcgcgt gaataatgta caggatcggc gccacgaaca tgaaggagaa ctcgataggc
    12121 tcggtaatac ccgtcaaaaa cgaggtcagc gcggcggaaa tcatgatacc gcccactttt
    12181 gcgcggtttt ccggtttagc agagtgccag atagcaatgg ccgcagccgg cagaccgtac
    12241 attttgaaca ggaagccgcc agacaacata cccgccgtcg ggtcgcccgc catatagcgc
    12301 ggaatgtcgc cgtggaatac ctgacccgct gcgttggtgt attcgccgat ctgcatctgg
    12361 aaaggaacgt tccagatatg atgcagacca aacggcacca ggcaacgctc gataaaaccg
    12421 taaatgccaa acgcgacaac cgggttctga taagccgccc actgcgagaa cgcctggata
    12481 gccgtaccga ctggcggcca tacgaaagac agcaccacac cggtaaaaat agcggccaga
    12541 cccgaaatga tcggcacgaa gcgtttgccc gcaaagaagc ccagatactc aggcagtttg
    12601 atacggtaga agcggttaaa catatacgct gcgatcgcac cggagataat ccccccgaga
    12661 acacccgtat cagcaaggtg tttagcggcg atctcttcag caggtaaatg cagaaccagc
    12721 ggcgcaacca cagccatggt tttcaccatg atgccatacg ctactaccgc cgccagagcc
    12781 gaaacgccgt cgttgttggt gaagcccaac gccacgccga tagcgaaaat cagcggcata
    12841 ttggcaaaaa cagatccgcc cgcttctgcc ataacgtgcg atacaacggc tggcagccag
    12901 ctgaagttag cggaaccgac acccagcagg atacctgcga tagggagtac ggataccggc
    12961 agcatcagcg atttaccggc cttttgcagg ttagtaaatg cattcttaaa cataattgag
    13021 agtgctcctg agtatttgtg cttttctacg ttctcacgca ttggcgaggg gggagaaccc
    13081 cgccgtggac aggacatcta agtgcccttt tatttattac acagagtaaa ataaatacgt
    13141 ctgattttgt ttgacggcta tcacgtttca gcgccagata gcctaaaaag tatcacattc
    13201 tgccaaaatg agttttcgaa tgtttccata agctcgctca ccgccccttt tgtggcggtg
    13261 aactttacgc gctttgctta ttaattacga gctttaaaaa aactcgttta acggattgat
    13321 gacaggcgag acgcgtcaat atggaacagg cgagcaaagt tatcggtggt gatctgcgcc
    13381 agttcttcaa cggcaacccc tttcaatacc gccatatatt ctgcgacgtc gcgtaccatc
    13441 gcaggctggt tctctttacc gcgatgcggc accggcgcca gataaggaga atcggtctcg
    13501 actaataacc gatccagcgg cacatagcgc gccgcatcac gcaactgttc agcgttacgg
    13561 aacgttacga tgccggaaaa agagatataa aaccccagat ccagcaattt gccggccgtt
    13621 tctctgtctt ctgtaaaaca gtgtagtacg ccgccgcaat ccgtcacttt ttcttcgcgc
    13681 aggatagcca gcgtatcggc acgcgcgtcg cgagtatgga caatcaccgg tttatgcaat
    13741 tcgcggccaa tctggatatg atgaataaaa gacgcctgct ggcggatttt ggtctcaggc
    13801 gtgtaaaagt aatcaagccc ggtctcgccc atcgccacca catcgtcttc tgcagcaagg
    13861 aggcgcagtt cttctacgtc atatacttca tcctgattta acggatgcac gccgcaggaa
    13921 aagaccacat tatcgcgctt gcccaccagc tcgcgcatat ggcgataccc cggcaacgtc
    13981 gtcgccaccg ctaaacagaa cttcacatcg cgcgcggcgg ctttcgccag cacatcgtcc
    14041 acgtccttat gcaaagattg ataatccaga ccatcaagat ggcagtgtga gtcgactaaa
    14101 aacataatgt ctctctcaaa gatgaggaac aggcaacaag gtgcctggtt gcaggtaatg
    14161 ctcgatgcgg agaatgagat cggttaatac cagttcgcga tttaatccgg tcacatgaag
    14221 taattgatca cgacaatggc aaacatcgtt caggattgcc tgaatacgcg ccggggatag
    14281 cggccccgcc agcgcggcaa caaccgcgtc cgcatcaacg tttgtcaggt ac
//
LOCUS       DAGWFR010000103        14313 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.105, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000103 DAGWFR010000000
VERSION     DAGWFR010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 14313)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14313)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14313
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.105"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..288
                     /locus_tag="MOX77_003041"
     CDS             <1..288
                     /locus_tag="MOX77_003041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001756569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
                     /protein_id="HCA3358504.1"
                     /translation="YKHIDDATLPACIPKRGQASDVRGPRTEQRPMTHVEAAKALRGK
                     FSANGLTWTPEHYRQLTAQYPDGVPEAALDEVMATLTTPARSSVISIVNGN"
     gene            299..1465
                     /locus_tag="MOX77_003042"
     CDS             299..1465
                     /locus_tag="MOX77_003042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020803496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HCA3358505.1"
                     /translation="MLVLKQQLKEARIPQAVVARAVDVSEATLAQIVNHNAWPRTSPG
                     EVRRRLASWLESQGIDTAKSFDAVQGAATPRTAGTTDKTSLSEEENMLLKKQVLFPAT
                     KKAFGLFRDPFADEAMQGSDDVFTTPDIRYVREALYQTARHGGFMAVIGESGAGKSTL
                     RRDLTERINRENAPVIVIEPYIIAMEDNDVKGKTLKAAAIAEAIISTIAPLESIRRSQ
                     DARFRQLHRVLKDSNQAGFSHVLVIEEAHSLPIPTLKHLKRFFELESGFKKLLSIVLI
                     GQPELATKLSERNMEVREVVQRCEVVELLPLDNHLEEFLTFKLQRAGKQLTDIMDASA
                     VDAIRTRLSNPGSHRKNMVSLLYPLAVSNLVIAAMNLAAEIGVPQVNADVVKGV"
     gene            1468..1737
                     /locus_tag="MOX77_003043"
     CDS             1468..1737
                     /locus_tag="MOX77_003043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000843445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358506.1"
                     /translation="MKSTTGINQQISKVQSAIMALKATNTDVQSITIRGNKPVIRVSR
                     SAHCMRMLEQGKACYLYTGHDHRGYFRQGVFELHGCRVVWPESLW"
     gene            1765..2295
                     /locus_tag="MOX77_003044"
     CDS             1765..2295
                     /locus_tag="MOX77_003044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001576700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host-nuclease inhibitor Gam family protein"
                     /protein_id="HCA3358507.1"
                     /translation="MAKSTKGAKRIKAAAALWVPGTREEVIEGIRLLGDAHRELVRAE
                     TEMNDAIGDITARYAPLTESLKKRMAELQSGIQTWCEAHRDELTGNGKVKFANLTTGE
                     VQWRNRPPSVSIRGADNVIELLRRLGLERFIRVKEEINKDAILNEKEAVKNIPGISIK
                     SDIEDFSIIPFEQDVQ"
     gene            2584..2856
                     /locus_tag="MOX77_003045"
     CDS             2584..2856
                     /locus_tag="MOX77_003045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000632581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358508.1"
                     /translation="MITPQEARQRTRALVEHYVNECECRDLTDVKHVLTALISMATQA
                     IVATNGKAAALQVLVNTLTHTAENEVPYRMETTAEGGLHITVSRKH"
     gene            2866..3168
                     /locus_tag="MOX77_003046"
     CDS             2866..3168
                     /locus_tag="MOX77_003046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000197790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358509.1"
                     /translation="MTRNTELTRTALYRLALQRFGPDAQALKLTEEAAELAASAARNL
                     NGQGSESDLAAELADVEIMTEQLRLQGMDRLIDFHKQKKLERLAARLGVTYTGEII"
     gene            3165..3548
                     /locus_tag="MOX77_003047"
     CDS             3165..3548
                     /locus_tag="MOX77_003047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001315283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358510.1"
                     /translation="MNRTEQTPQLTPEDAAQRIRVLEDENEYLRKRFEEVDLYFGRNL
                     VVMKAAVIEWRATGDARNGMAWIYNTLCGPGELPPQEEKEAQEYFNRETEVIDRKLAA
                     LYHWFRKYHRTHAAPDQTTTGGTSD"
     gene            3556..3756
                     /locus_tag="MOX77_003048"
     CDS             3556..3756
                     /locus_tag="MOX77_003048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000763553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358511.1"
                     /translation="MEIVVWAFLLTGIAVCICAGFALVALLTHVVTQWLWEKLKAAYS
                     LKELSDAVRAWEQQKNTGDTEQ"
     gene            3753..4436
                     /locus_tag="MOX77_003049"
     CDS             3753..4436
                     /locus_tag="MOX77_003049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000131939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2786 domain-containing protein"
                     /protein_id="HCA3358512.1"
                     /translation="MTDQDKHIEKLKKLLALAASGNPHEAALALRRARKLMDVHGITH
                     SDIAMSDIDETISHYWPTGSLRPPRYMLGLMNIIREAFGVNSIIHPGTYPGVGFYGNR
                     ERAALAAYTWEVLARQLKKARQQYISAQNKRIKTATRTSRGDQFAEGWVLAVISEIQS
                     FALTDDERELMQQWLEHKYPQTQTTRARKPGRSRNGDASRYAGFREGQNVRLHRPVSG
                     REQQKLEAR"
     gene            4433..4663
                     /locus_tag="MOX77_003050"
     CDS             4433..4663
                     /locus_tag="MOX77_003050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000631816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358513.1"
                     /translation="MITLSGNSRKLKACRISARYLFARAFFKNVRPGITIGVIAGREQ
                     VEKYMSGAWWNKDPVIAARNIHISWGDIQNDD"
     gene            4653..4868
                     /locus_tag="MOX77_003051"
     CDS             4653..4868
                     /locus_tag="MOX77_003051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001297463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358514.1"
                     /translation="MTTESVVCALFWYCFVGWCTAELHRRSGFYSRYSGAGYWISWSV
                     MFLCWPVALPLYVDYIGDAGRRSNNDD"
     gene            4861..5310
                     /locus_tag="MOX77_003052"
     CDS             4861..5310
                     /locus_tag="MOX77_003052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001610542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="regulatory protein GemA"
                     /protein_id="HCA3358515.1"
                     /translation="MTKQRLIQLIHIARNELGMDEDTYRQMLQGLTGKASTKGMDTTQ
                     LNCVLESMKRKGFRVRPAGKASSGLPLDNHPQSRKIRALWLEMAAAGIVRDRSENALA
                     RWIKRETGISALRWLNTEQASSVIEKLKKWQRRAAGVKHERPESVSK"
     gene            5282..5671
                     /locus_tag="MOX77_003053"
     CDS             5282..5671
                     /locus_tag="MOX77_003053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001281697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HCA3358516.1"
                     /translation="MSDLNQFRSKGPELLVELAQHTSETVREIIDIEPAIADQIGQAV
                     ANRMMQVWGGQNVYFPMGMVWKVSQRDREIFREFNGRNHHELARKFGVSLQWVYSVVK
                     RVRKEELDRMQGKLFADEPDVDTEKKE"
     gene            complement(5853..6797)
                     /locus_tag="MOX77_003054"
     CDS             complement(5853..6797)
                     /locus_tag="MOX77_003054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1471 domain-containing protein"
                     /protein_id="HCA3358517.1"
                     /translation="MKLKNTLLASALLSAAAFSVHAATELTPEQAAALKPYDRIVITG
                     RFNAIGDAVSAVSRRADKEGAASFYVVDTSEFGNSGNWRVVADVYKADAPKADAPKNR
                     VINGIVELPKDQAVQLEPYDTVTVQGFYRSQPEVNDAITKAAKQKGAYAFYIVRQIDA
                     NQGGNQRITVFIYKQDAKKRIVQSPDAIPADSEAGRAALAQGGEAAKKVEIPGVATSA
                     SPSAEVGRFFETQSSKGGRYTVTLPDGTKVEELNKATAAMMVPFDSVKFTGNYGNMTE
                     ISYQVAKRAAKKGAKYYHITRQWQERGNNITISADLYK"
     gene            7324..8853
                     /gene="pntA"
                     /locus_tag="MOX77_003055"
     CDS             7324..8853
                     /gene="pntA"
                     /locus_tag="MOX77_003055"
                     /EC_number="1.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HCA3358518.1"
                     /translation="MRIGIPKERLPNETRVAATPKTVEQLLKLGFSVAIESGAGQLAS
                     FDDKAFAQAGADIVDGNAIWQSEIILKVNAPEEEEIALLNPGTTLVSFIWPAQNPGLM
                     EKLAERKVTVMAMDSVPRISRAQSLDALSSMANIAGYRAIVEAAHEFGRFFTGQITAA
                     GKVPPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKE
                     EAGSGDGYAKVMSEAFIKAEMALFAAQAKEVDIIVTTALIPGKPAPKLITRDMVDSMK
                     AGSVIVDLAAQNGGNCEYTVANQVVTTDNGVKVIGYTDLPGRLPTQSSQLYGTNLVNL
                     LKLLCKEKDGNIDVDFDDVVIRGVTVIRDGDITWPAPPIQVSAQPQAAPKAAPAPKEP
                     EKPASPWRKYALMALAIILFGWLADVAPKEFLGHFTVFALACVVGYYVVWNVSHALHT
                     PLMSVTNAISGIIVVGALLQIGQGGWVSFLSFIAVLIASINIFGGFTVTQRMLKMFRK
                     N"
     gene            8864..10252
                     /gene="pntB"
                     /locus_tag="MOX77_003056"
     CDS             8864..10252
                     /gene="pntB"
                     /locus_tag="MOX77_003056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000014033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit beta"
                     /protein_id="HCA3358519.1"
                     /translation="MSGGLVTAAYIVAAILFIFSLAGLSKHETSRQGNNFGIAGMAIA
                     LLATIFGPDTGNVAWILVAMIIGGAIGIRMAKKVEMTEMPELVAILHSFVGLAAVLVG
                     FNSYLYHDASLAPVLVNIHLTEVFLGIFIGAVTFTGSIVAFGKLRGKISSKPLMLPNR
                     HKMNLAALVVSFLLLLVFVRTESVGLQVLALLLMTIIALAFGWHLVASIGGADMPVVV
                     SMLNSYSGWAAAAAGFMLSNDLLIVTGALVGSSGAILSYIMCKAMNRSFISVIAGGFG
                     TDGSSTGDDQEAGEHREITAEETAEMLKNSHSVIITPGYGMAVAQAQYPVAEITEKLR
                     ARGINVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFADTDTVLVIGAND
                     TVNPAAQDDPRSPIAGMPVLEVWKAQNVVVFKRSMNTGYAGVQNPLFFKENTQMLFGD
                     AKASVDAILKAL"
     gene            complement(10427..11461)
                     /locus_tag="MOX77_003057"
     CDS             complement(10427..11461)
                     /locus_tag="MOX77_003057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HCA3358520.1"
                     /translation="MAKPIITLNGLKIVIMLGMLVVILSGIRFAADIIVPFILALFIA
                     VVLNPVVQRMTRCRIPRVIAVSLLIVIIVMLMVLLLAYLGTSLNELARTLPQYRSSLV
                     IPLQRIEPWLQRAGIGVSVDELAKYIDPNAAMTLVTNLLTQLSNAMSSIFLLLLTVVF
                     MLLEVPQLPEKLQQMMSRPVEGMAAIQRALDSVSHYLVLKTAISIVTGLVAWGMLAAL
                     DVRFAFVWGLLAFALNYIPNIGSVLAALPPIIQVLVFNGFYDALLVLAGYLLINLVFG
                     NILEPRIMGRGLGLSTLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQTTGGQSI
                     AVLLSDLNKR"
     gene            11878..12240
                     /gene="mdtJ"
                     /locus_tag="MOX77_003058"
     CDS             11878..12240
                     /gene="mdtJ"
                     /locus_tag="MOX77_003058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug/spermidine efflux SMR transporter
                     subunit MdtJ"
                     /protein_id="HCA3358521.1"
                     /translation="MFYWILLALAIATEITGTLSMKWASVGNGNAGFILMLVMITLSY
                     IFLSFAVKKIALGVAYALWEGIGILFITIFSVLLFDEALSTMKIAGLLTLVAGIVLIK
                     SGTRKPGKPVKEATRATI"
     gene            12227..12556
                     /gene="mdtI"
                     /locus_tag="MOX77_003059"
     CDS             12227..12556
                     /gene="mdtI"
                     /locus_tag="MOX77_003059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug/spermidine efflux SMR transporter
                     subunit MdtI"
                     /protein_id="HCA3358522.1"
                     /translation="MQQFEWIHGAWLGLAIMLEIAANVLLKFSDGFRRKCYGILSLAA
                     VLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWVLFGQRLNPKGWVGVILLLAG
                     MVMIKFA"
     gene            complement(12591..13412)
                     /locus_tag="MOX77_003060"
     CDS             complement(12591..13412)
                     /locus_tag="MOX77_003060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease"
                     /protein_id="HCA3358523.1"
                     /translation="MHKTIAVLLGIVCFLPVMAKAGGAETDATDASDVKTLFFNHDDR
                     VPVADPTQSPWDAIGQLETASGNLCTATLISPHIALTAGHCLLTPPKGKPDKAVALRF
                     VARKGVWRYEIHGIEGRVEPSLGRRLKADGDGWIVPPAAASWDFGLVILRYPPSGITP
                     VPLFTGDKAALTAALKAADRKVTQSGYPEDHLNALYSHQDCVVTGWAQNAVLSHQCDT
                     LPGDSGSPLLLHTDSGWQLIGVQSSAPAAKDRWRADNRAISVTGFRDKLKALAQD"
     gene            complement(13681..13932)
                     /locus_tag="MOX77_003061"
     CDS             complement(13681..13932)
                     /locus_tag="MOX77_003061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001698353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid shock protein"
                     /protein_id="HCA3358524.1"
                     /translation="MKKVLALVVAAAMGLSSAAFAAETATPAKTAAPAKTTQTTQHHK
                     KQHKKTVEQKAQAAKKHQKKDGKKAPAKSTSKTTSQPAA"
BASE COUNT         3453 a         3559 c         3938 g         3363 t
ORIGIN      
        1 tataaacata ttgatgacgc cacacttccg gcctgtatac cgaagcgagg tcaggcctct
       61 gacgtacgcg gaccgcgcac tgaacagcgt cccatgactc atgtggaggc cgcgaaagcc
      121 ctgcgcggga agttcagcgc caacggcctt acctggacgc cggaacatta ccgccagtta
      181 acggcacagt atccggacgg cgtaccggaa gccgcactgg atgaagtcat ggctacgctg
      241 accacgccgg cccgcagcag cgttatcagc attgttaacg gcaactgagg agggaaacat
      301 gctggtactg aagcagcaac tgaaagaggc ccgtattcca caggcggtgg tggcgagagc
      361 tgtcgatgtt tctgaggcca cgctggccca gattgtgaat cataacgcgt ggccccgcac
      421 cagccccgga gaagtgcgcc ggcgtcttgc gtcctggctg gaaagtcagg ggattgatac
      481 agcgaagagt tttgatgctg tacagggcgc ggccacgccc cgtacagcgg gtaccacaga
      541 taaaacgagc ctcagtgagg aagagaatat gttactcaaa aaacaggtgt tatttccagc
      601 aaccaaaaaa gcgtttggtc ttttccgtga cccgttcgcc gacgaagcca tgcagggttc
      661 tgatgatgtg ttcaccacac cagacattcg ctacgtgcgt gaggcgttgt accagacagc
      721 ccgtcatggt gggtttatgg ccgtcatcgg tgagtccggt gcgggtaaat ccacgctgcg
      781 ccgtgacctg actgaacgta tcaaccgcga gaatgcgcca gtgattgtta tcgagccata
      841 catcatcgct atggaagaca acgatgtgaa agggaaaact ctgaaggcag cagcgattgc
      901 cgaagccatt atcagtacca tcgcaccact ggaaagcatc agacgcagtc aggacgcccg
      961 ctttcgccag ttgcatcgcg tcctgaaaga cagcaaccag gcggggttca gccacgttct
     1021 ggtgattgag gaggctcaca gtttgcccat tccgacactg aaacacctca aacgcttttt
     1081 tgagctggag tccggtttca aaaagctgct gtccatcgtg ctgattggcc agccggaact
     1141 ggcgacaaaa ctctctgaac gcaacatgga agtccgcgaa gtcgttcagc gctgtgaggt
     1201 ggtcgaactt ctgcctctgg acaatcacct tgaagaattt ctgacgttca aactgcaacg
     1261 ggccggtaaa caactgacgg acattatgga cgccagcgca gtggatgcca tacgtacccg
     1321 cctgagcaat ccgggaagtc atcgtaaaaa tatggtcagc ctgctgtatc cgctggccgt
     1381 cagtaacctg gtaatagccg ccatgaatct ggccgctgaa atcggggttc cacaggtcaa
     1441 cgctgacgtt gtcaaagggg tttaataatg aaatccacca caggtatcaa ccagcaaatc
     1501 agtaaagtgc agtcagccat tatggcgctt aaggcgacga acacggatgt acaaagcatc
     1561 accatcaggg gtaacaaacc tgtcatccgc gtttccagga gtgcgcattg catgcgcatg
     1621 cttgagcagg gaaaggcctg ttatctgtat accggacatg accacagggg atatttccgt
     1681 cagggcgttt tcgaactgca cggctgtcgc gtcgtgtggc cggaatcttt gtggtaatca
     1741 gcacaactgg agaaatcata aaaaatggca aaaagtacaa aaggtgcaaa acgtatcaag
     1801 gccgcagcag cactctgggt gccggggaca cgtgaagagg tcattgaggg catcagactg
     1861 ctcggtgacg cacaccgtga actggtcagg gctgaaacag aaatgaatga cgccattggc
     1921 gatatcaccg cacgttatgc cccgctcacc gagagcctga aaaaacgcat ggccgaactg
     1981 cagtccggta ttcagacatg gtgtgaggca caccgtgatg aactgaccgg caacgggaag
     2041 gtgaagtttg ctaacctcac caccggcgag gtgcagtggc gaaaccgccc gccgtcagtc
     2101 agcattcgcg gagcggataa tgttattgaa ctactgagac gtctggggct tgagcgcttt
     2161 attcgtgtaa aagaggaaat aaataaagac gctatcctga atgaaaaaga ggccgtgaaa
     2221 aatattcccg gtatttccat taaaagcgac attgaggatt tttcaataat tccttttgag
     2281 caggatgtgc agtaaacaca ccacgttaat tatttaataa aaacattttc ttttttattc
     2341 cggcgtcagc gccgtgggct tctgcacgct ggaaacagag gagaattaaa ttatgatatt
     2401 taaatgtatt cagtgcgaga gggatataac agccctgcgt tttcacagcg ccatcgccgt
     2461 gatgtccggt aaataccaca tccctgcggt acgcgtcacc ctggtctgcc cgtactgcag
     2521 ccagcatttt tcggcagacg tgcctgtcat ggaattctcc cgccctgaca gggaggacgc
     2581 gcaatgatta ccccacagga agcacgccag cgtacccgcg cccttgttga acactatgtc
     2641 aacgagtgtg aatgccgcga cctcaccgat gtgaagcacg tcctgacggc gctaatcagc
     2701 atggccacgc aggccattgt ggcgaccaac ggaaaggcgg ctgcactgca ggtactggtg
     2761 aacacactca cccacacggc agagaacgag gtgccgtacc ggatggaaac cactgcagaa
     2821 ggcggcctgc acatcaccgt cagccggaag cactgagggc gcggcatgac acggaacacc
     2881 gaactcaccc gcaccgccct ctaccgtctg gccctgcagc gtttcgggcc ggacgcacag
     2941 gccctgaaac tgacagaaga ggccgctgaa ctggcggcca gtgccgcccg caacctgaac
     3001 ggacagggca gcgaaagtga cctcgcggca gagctggcag acgtggaaat catgacagag
     3061 cagctgcgcc ttcagggaat ggaccggctg attgacttcc acaaacagaa aaaactggaa
     3121 cgccttgccg cacggctggg cgtcacatac accggagaaa tcatatgaac cgcaccgaac
     3181 agacgccaca actgacgccg gaagatgctg cacagcgtat tcgggtactg gaagacgaaa
     3241 acgaatacct gcgcaagaga tttgaagagg tggacctgta cttcgggcgc aatctggtcg
     3301 tcatgaaagc tgcagtgatt gagtggcggg ccaccggtga tgccaggaac ggcatggcgt
     3361 ggatttacaa caccctgtgt gggccgggcg aactgccgcc gcaagaggag aaagaggcac
     3421 aggaatactt caacagggaa actgaagtta tcgacagaaa actggctgcc ctgtaccact
     3481 ggttcaggaa ataccacagg acacacgccg cacctgacca gaccaccaca ggaggtacca
     3541 gtgactgaca ccattatgga aattgtggta tgggctttcc tgcttactgg tatagccgtg
     3601 tgcatctgcg ccggattcgc cctggttgcc ctgctgaccc acgtggtgac gcagtggtta
     3661 tgggaaaagc ttaaagcagc atacagcctg aaagagctgt ccgacgctgt tcgggcatgg
     3721 gaacagcaaa aaaataccgg agatactgaa caatgacaga ccaggataag cacattgaga
     3781 aactgaaaaa gttgctggcg ctggcagcat ccggcaaccc gcatgaggct gctctggcac
     3841 tgcgccgcgc ccgtaaactg atggatgttc acggcatcac acattccgac atcgccatga
     3901 gtgatattga tgaaaccatc agtcactact ggccgacagg cagcctccgt ccgccgcgct
     3961 acatgctggg cctgatgaac atcatccgcg aggcatttgg tgttaactcc atcattcacc
     4021 ccggcacata tccgggtgtg gggttctacg gcaaccggga acgggccgca ctggccgcgt
     4081 acacctggga agtgctggcc cgtcagctga aaaaggcgcg tcagcagtat atcagtgcac
     4141 agaacaaaag aataaaaacc gccacccgca ccagccgtgg agaccagttt gctgaaggct
     4201 gggtgctggc cgttatcagt gaaatacagt ccttcgccct gaccgatgac gaacgtgaac
     4261 tgatgcagca gtggctggaa cataaatacc cgcagacgca aaccaccagg gcgcgtaaac
     4321 cgggaagaag tcgcaatggc gacgcctcgc gctatgcggg gtttcgagaa gggcagaacg
     4381 tcagactgca ccgaccggtc agtgggcggg aacagcagaa actggaggcc agatgattac
     4441 gttatcaggt aacagccgga aattaaaagc ctgccgaata tctgccagat acctttttgc
     4501 ccgcgccttt tttaagaacg tcaggccggg gatcacaatt ggtgttattg ccggacgcga
     4561 acaggttgaa aaatacatgt caggtgcatg gtggaataaa gaccctgtca ttgctgcccg
     4621 taatattcat atcagttggg gggatattca gaatgacgac tgaatctgtt gtatgtgccc
     4681 tgttctggta ttgttttgtc ggttggtgta ctgctgaact gcaccgccgt tcagggtttt
     4741 attcacgtta cagtggtgcc ggttactgga ttagctggtc ggtgatgttc ctgtgctggc
     4801 ctgtggcact tcctttatat gtcgattata tcggtgatgc aggcagaagg agcaacaatg
     4861 atgactaaac aacgtcttat ccagctcatt catattgccc gtaatgaact gggtatggat
     4921 gaagacacct accgccagat gttacagggg ctgaccggta aagcctcaac caaaggaatg
     4981 gataccacac aactaaactg cgtgctggaa tccatgaaaa ggaaaggctt tcgcgttagg
     5041 cctgcaggaa aagccagctc cggtttaccg ctggataacc atccgcaatc caggaaaatc
     5101 cgtgcgctat ggcttgaaat ggctgctgcc ggcattgttc gtgaccgttc agaaaatgca
     5161 ttagcgcggt ggatcaagcg ggaaacgggc atcagcgccc tgcgctggct caatactgaa
     5221 caggcaagca gtgttattga gaaactgaag aagtggcagc gcagagctgc gggagtaaaa
     5281 catgagcgac ctgaatcagt ttcgaagtaa agggccggaa ctcctggtgg aactggcaca
     5341 gcatacctct gagaccgttc gcgagattat tgatattgag cccgcaattg ccgaccagat
     5401 tggtcaggcc gtcgcgaacc gcatgatgca ggtctggggc gggcaaaacg tttatttccc
     5461 gatgggcatg gtatggaagg tcagtcagcg cgaccgggaa atcttcaggg agtttaacgg
     5521 acgtaaccac catgaactgg cccgcaaatt tggtgtttcg cttcagtggg tctacagcgt
     5581 ggttaagcgg gtaagaaaag aagaactgga tcggatgcag ggcaagctat ttgctgatga
     5641 acccgatgta gatacggaga aaaaagagta atatctgcaa tcaggctggc gcgagttctg
     5701 tttttgttcg ggccggtctg attttcacat actgtaaggt tattgcatat tcctcctggt
     5761 ctcttcccat tttgacccag ttcttcccat aaatatctca cttattccct gtcatttatc
     5821 tcaagtctaa tcacctgatg gcgacgcgcg ccttatttat agaggtcggc gctgatggtg
     5881 atgttattac cgcgctcctg ccactgacgc gtaatatgat aatacttagc gcctttcttc
     5941 gccgcgcgtt tggcgacctg gtaggagatt tctgtcatat tgccgtagtt gccggtgaac
     6001 ttaacgctgt cgaaaggcac catcatcgca gccgtcgctt tattcagctc ctcaactttt
     6061 gtgccatccg gaagtgtgac agtgtaacgc ccgcctttgg aggattgcgt ttcgaagaaa
     6121 cggcctactt cggcgctcgg cgaggctgac gtggcgacgc ctggaatttc gactttcttc
     6181 gcagcttcgc cgccctgagc cagcgcggca cggccagctt cagagtctgc cggaatagcg
     6241 tccgggctct ggacgatgcg ttttttcgca tcttgtttat agataaatac agtgatgcgt
     6301 tggtttccgc cctgattcgc atctatctga cgaacaatat agaaagcgta tgcgcctttt
     6361 tgtttcgccg ctttcgtaat ggcatcgtta acttccggct ggctacggta gaagccctga
     6421 acggtgacgg tgtcatacgg ttctaattgt acggcctggt ctttcggtaa ttccacgatg
     6481 ccattaatga cacgattttt gggcgcgtcg gctttcggcg cgtcggcttt atacacgtcc
     6541 gccacaacac gccagttacc actgttgccg aactccgagg tgtcgacaac atagaaggag
     6601 gctgcgcctt ctttatctgc gcggcgggac acggcggaga ccgcatcgcc aatagcatta
     6661 aaacgaccgg taataacgat gcggtcataa ggttttagtg cagccgcttg ctccggcgtc
     6721 agttctgttg ctgcatggac agaaaaagca gccgcagaaa gcagagccga cgccaggaga
     6781 gtgttcttaa gcttcataaa aataatcctt tgccttgcgc aaaccaggta ctggtattgt
     6841 tattgactag aaacgtggct gattattgca tttaaaccat atggatgtct gcgggatttt
     6901 tcacgcatcg tgtcatgtat cctatctttg atgataacat ttactgatat gtcgaaaaaa
     6961 acggcgtccg ggcggctaag ctaatgaagc gcataaattt aataagttaa tttaatgtta
     7021 atttcttgat ctcgccaggg gtttaatgat gttttgctgt caaatttgag cgaattatca
     7081 gccctcgcag gccattttca aggcattatg gctgcttagc ggctgaatcg ttcatgtttt
     7141 gtaaatttga taaaaaattc tgttttttgg cgctagatca caggcgttat tttcagtagg
     7201 ttatagagag tttgtaacgg ttttattctg ctggggtaac atttacctca aacgcgggca
     7261 ggcgtacgct tctcgcgctt actgacaaac catcatcaaa aataccgatg gaagggaaca
     7321 tttatgcgaa ttggcatacc aaaagagcgg ttacccaatg aaacccgtgt cgctgcgacg
     7381 ccgaaaacgg tagagcagct actgaagctg gggtttagcg tcgctatcga aagcggggcg
     7441 ggtcaactgg caagttttga cgacaaagcg tttgcgcagg ctggcgcgga tattgtagac
     7501 ggcaatgcta tctggcaatc ggaaattatt ctcaaggtta atgcgcctga agaagaggaa
     7561 atcgctttac tgaaccccgg gactacgctg gtcagtttta tctggcctgc gcaaaatcct
     7621 gggttaatgg agaaacttgc cgaacgtaag gttacggtga tggcgatgga ctccgtgccg
     7681 cgtatttccc gcgcgcagtc gctcgacgcg ttaagctcaa tggcgaatat cgcgggttat
     7741 cgcgccattg tagaggccgc gcatgaattt gggcgcttct ttaccgggca aatcactgcc
     7801 gccgggaaag tgccgccggc gaaggtgatg gtgattggcg cgggcgttgc cggtcttgcg
     7861 gctatcggcg cggcaaacag cctgggggcg attgtccgcg cgtttgacac tcgtcctgaa
     7921 gtcaaagagc aggtccagag tatgggggct gagttcctcg aactggattt taaagaggaa
     7981 gccggtagcg gcgatggtta cgccaaagtg atgtccgagg cgtttatcaa agcggaaatg
     8041 gcgctctttg ccgcccaggc caaagaagtc gatatcattg ttaccaccgc gttgattccg
     8101 ggcaaacctg cgccgaagct gattacccgc gatatggtcg attctatgaa ggccggcagc
     8161 gtgattgtcg acctggccgc gcagaacggc ggtaactgcg aatataccgt cgccaatcag
     8221 gttgtgacga cggacaatgg cgtaaaagtg attggctaca ccgatctacc ggggcgtttg
     8281 ccgacgcagt catcccagct ttatggcacc aacctggtta acctgctgaa gctgctgtgc
     8341 aaagagaaag acggcaatat tgacgtggat tttgacgatg tcgtgatccg tggcgtgacg
     8401 gtgattcgtg acggcgacat tacctggcct gcgccgccaa tccaggtttc cgcgcagcca
     8461 caggccgcgc ctaaagcagc acctgcgcca aaagagccgg aaaagcccgc ttccccctgg
     8521 cggaagtatg cgttaatggc gctggcgatc attctttttg gctggctggc cgatgtcgcg
     8581 ccaaaagagt tcctcggcca ttttaccgtg tttgcgctcg cctgcgtggt tggttattac
     8641 gtggtgtgga acgtgtctca tgcgcttcat acgccattaa tgtcggtgac caacgcaatt
     8701 tcagggatta ttgttgtcgg ggcattattg caaattggtc agggcggctg ggtcagcttc
     8761 ctgagcttta tcgcggtgct tatcgccagc attaatattt tcggtggctt caccgtgact
     8821 cagcgtatgc tgaaaatgtt ccggaaaaac taaggggtaa cacatgtctg gaggattagt
     8881 tacagctgca tacattgttg ccgcgatcct gtttattttc agtcttgccg ggctttcaaa
     8941 gcatgaaacg tcccgccagg ggaataactt cggtattgcc gggatggcga tcgcgttgct
     9001 ggcgaccatt ttcgggccgg ataccggcaa cgtggcatgg attctggtcg ccatgattat
     9061 tggcggcgcg attggcatcc gcatggcgaa aaaagttgag atgaccgaga tgccggagct
     9121 ggtcgcgatt ctgcacagtt tcgtgggcct ggcggcggta ctggttggct ttaacagcta
     9181 tctgtaccat gacgccagtc tggcgccggt gctggtgaat atccatctga ccgaagtctt
     9241 cctcggtatc tttattggcg cagtcacttt cactggatcg atcgtagcgt ttggtaaact
     9301 gcgcggcaaa atctcttcta agccgttgat gttgcctaac cgtcacaaaa tgaatctggc
     9361 ggcgctggtt gtttctttcc tgttgctgct ggtttttgtt cgtaccgaaa gcgtgggtct
     9421 acaggttctg gcgctactgc tgatgaccat tatcgcgctg gcgtttggtt ggcatctggt
     9481 cgcttctatc ggcggggcgg acatgccggt ggttgtttca atgctgaact cctattccgg
     9541 ttgggctgcc gcggcggctg gcttcatgtt gagcaacgat ttgctgattg tgaccggcgc
     9601 gctggtcggt tcgtcaggcg cgatcctgtc ttacattatg tgtaaagcga tgaaccgctc
     9661 tttcatcagc gttattgctg gtgggttcgg tactgacggc tcctcaacgg gcgacgatca
     9721 ggaagctggc gaacatcgcg aaattacggc ggaagagacc gctgagatgc tgaaaaactc
     9781 ccactccgtc attattacgc cggggtacgg gatggcggta gcgcaggcgc agtatccggt
     9841 ggcggaaatc accgaaaaac tgcgtgcgcg cggtatcaac gtgcgtttcg gcattcatcc
     9901 ggtggcgggt cgcctgccgg ggcatatgaa cgtgctgttg gcggaggcga aagtgcctta
     9961 tgacatcgtg ctggaaatgg acgaaatcaa tgatgatttc gccgataccg ataccgtgct
    10021 ggtgattggc gcgaacgata cggtgaaccc ggcggcgcaa gacgatcccc gcagcccgat
    10081 cgccggtatg ccggttctcg aagtgtggaa agcacagaat gtcgtggtct ttaagcgttc
    10141 catgaatact ggttatgctg gtgtgcagaa cccgctgttc tttaaagaga atacgcaaat
    10201 gctgtttggc gatgccaaag ccagcgtgga tgcaattctg aaagcgcttt aatcttttaa
    10261 acgtgcggcg gcctctttgg aggccgtttt tatacatttc accctataag ctgcctcttt
    10321 gttggctgcg ctcagaaacc ccggtcacat cgttatctat gctcccgggg atttcttccc
    10381 ttgccgccgc gatgcatctt gaatgatttt gtgtatatat tgcattttat cttttgttta
    10441 aatcgctaag cagaacggcg atactctgcc cgccggtggt ctgttcgagg gcgattttga
    10501 caatgatggt taacggaacg gagagcaaca tgcccaccgg acctaatagc cagccccaga
    10561 aaattaacga caaaaatacc actaaggttg aaaggcctaa accacgtccc atgatacgtg
    10621 gctcaaggat attgccgaag accagattaa tcagcagata gcccgccagc accagcagcg
    10681 catcataaaa cccgttaaat accagcacct gaataatggg cggcagggca gcgagcaccg
    10741 atccaatatt agggatatag ttcagcgcga aggccagtag accccagaca aaggcgaagc
    10801 ggacatccag agcggccagc attccccatg cgaccagtcc cgtcacgata ctgatcgctg
    10861 tttttagcac cagataatgt gaaacgctat caagcgcgcg ttgaattgcc gccatacctt
    10921 ctaccggacg gctcatcatc tgctgcagtt tttcaggcag ttgtggaacc tccagcagca
    10981 tgaataccac ggtcaataac aataaaaaga tggatgacat ggcattggac agttgggtga
    11041 gcaggttcgt taccagagtc atggcggcgt ttggatcgat atatttcgcc agctcatcaa
    11101 ccgacacgcc aatgcctgct cgctgcaacc acggttcaat acgttgcaac ggtatcacca
    11161 atgaggagcg atactgcggt agggtacggg ccagttcatt taatgatgtc cccaaatagg
    11221 ccagtagcag taccattaac ataacaataa tcacaatgag caatgatacg gcgataacgc
    11281 gcggaattcg acatcgggtc atccgttgca caacgggatt gagaacgact gcaataaata
    11341 acgccaaaat aaagggaaca atgatatctg cggcgaagcg gataccgctc agaataacca
    11401 ccagcattcc cagcataatg acgattttta gaccattgag cgtgatgatc ggttttgcca
    11461 tatcagtccc tgttttctat gccgacacga ataataatgt gatgtcggtc gacctgttct
    11521 ggttaaaatc aaacacttca ggtaaagaag tgaaaatatt ttgagttaat tcctggctta
    11581 tgatacaaat caggcgtgtt caactaccga ggacaattat catccgcgat gacgagaagc
    11641 aacactgcgg ataattgtaa tattatggac aatatgttca gcgctttttt ctccacgcaa
    11701 acgcatcttc actctacctc ctttttcctg cttatcggcg agcagcactg gcgtaacgca
    11761 ctttagtctc tcacttctgc ctgagctggc gcaatgcgct gtgctaactg attttatttt
    11821 ttagtttgct gcgtgcagca gactcgaaag agtatattct catgcaggag aagtgtcatg
    11881 ttttactgga ttttattagc tctggctatc gcgactgaaa ttaccggcac gctctcaatg
    11941 aaatgggcta gcgtgggtaa tggcaatgcg ggttttattt taatgctggt gatgatcacg
    12001 ctgtcatata tatttctttc ttttgcggta aaaaagattg ccctgggtgt agcgtatgcc
    12061 ttatgggaag ggatcggcat tttatttatt accattttta gcgtgctgct atttgatgaa
    12121 gcattatcaa ccatgaagat tgccggcttg ctgacgctgg tcgccggcat cgtattgatc
    12181 aaatcaggga cgcgtaaacc cggcaaaccg gtgaaggagg cgactcgtgc aacaatttga
    12241 atggatacac ggcgcctggc ttgggctggc aataatgctg gaaatcgcgg ctaacgttct
    12301 gttgaaattt tcggacggct ttcgccgtaa atgctatggc atcttatcgc ttgccgctgt
    12361 tctggccgcc ttcagcgcgc tttcccaggc ggtaaaaggg atagacctgt cggtggcgta
    12421 tgcgctatgg ggcggttttg gtattgccgc cacgctggcg gcgggctggg tgctcttcgg
    12481 ccagcgctta aatcccaaag gctgggttgg cgtgatattg ctgctcgccg gaatggtcat
    12541 gataaaattt gcctgagacg atcgctgccg gtcaggcagc gattcccgca ttaatcctgc
    12601 gccagagctt tcagcttatc gcgaaagccg gtgacggata tagcgcggtt atcggcgcgc
    12661 cagcgatctt tagccgcagg ggcggagctt tgtacgccaa tgagctgcca tccgctatcc
    12721 gtgtgcaata ataacggcga gccgctgtcg ccaggtaacg tgtcgcactg gtgtgagagt
    12781 acggcattct gcgcccagcc ggtcacgacg caatcctgat gggaatagag cgcattcaga
    12841 tgatcttccg gataaccgga ctgcgtgact tttcggtctg cggctttcaa cgccgcagtg
    12901 agcgccgctt tatcgccggt aaataaaggc actggcgtga taccggaagg tgggtagcgc
    12961 aatattacca gaccaaaatc ccagcttgcc gcggcaggcg gcacaatcca gccatcgcca
    13021 tccgctttca aacgtcggcc cagcgacggt tcaacgcggc cttcaatgcc gtggatttca
    13081 tagcgccata ctccttttcg cgccacaaaa cgcagcgcaa ccgctttgtc cggttttcct
    13141 ttcggcggcg ttagcaggca gtgacctgct gtcagggcga tatgcgggga gataagcgtt
    13201 gccgtacaca aattaccgct ggcggtctct agttgcccga tggcatccca cggcgattgg
    13261 gtcggatcgg cgacgggcac tcgatcgtca tggttaaaaa aaagcgtttt gacgtcgctg
    13321 gcatccgtgg cgtctgtttc agcccccccg gctttcgcca taaccggtaa aaaacacact
    13381 atgcccagta atacagcaat ggttttatgc atatcacact ctggtgggta attatgatta
    13441 ttaacaacaa accctcagta ctactataga cgtgacggta agaaagtggg agtaaaatca
    13501 gataactaca ctcaggaaag atagaaatgc gtggcaataa cggcgcataa aataagcacg
    13561 ataagaatga gctcaaagcg gtagcgagac acttttttgc cctcccggaa ggcggcgcta
    13621 aaccagaacg atttagcgcc gtaaaaacgg gcgcgggggc gcgccgcagc atgttacgac
    13681 ttacgcagct ggttgcgaag ttgtttttga cgtagatttg gctggggctt ttttgccatc
    13741 ttttttctgg tgctttttag ccgcctgcgc tttttgctca acggtttttt tatgctgttt
    13801 tttgtggtgc tgggtggtct gggttgtttt ggcaggcgct gcggtttttg caggcgttgc
    13861 agtctcagcc gcgaatgctg cggaagagag acccattgca gcggcaacaa ccagagctaa
    13921 tacttttttc attttgatac cctcgatttg gttttcattc aaccccactg cggggccggt
    13981 gaaatgacta tatcgctgtt atcaaaaggc ttccgtgagt gattggtttc ggcatgtaac
    14041 gctatgtaca atcccccggt aacgcgatgt aagcccccac cataataggt agctttacgt
    14101 taccggccgt tatttttggt cgcagagtcg gtaatatccg ccctccagaa taacaggcac
    14161 accgtatatg aatccgataa tctgggtggt atttacgctt ctggcgctgg atgcaatcag
    14221 agaagtcatg ggcgtatcaa gcctggcagg tctgtggtga acagtgagtc gtggcgtgaa
    14281 accagcccgg cgatagcgca cgttgctatc gcc
//
LOCUS       DAGWFR010000104        14158 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.106, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000104 DAGWFR010000000
VERSION     DAGWFR010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 14158)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14158)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14158
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.106"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(110..505)
                     /locus_tag="MOX77_003062"
     CDS             complement(110..505)
                     /locus_tag="MOX77_003062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HCA3358525.1"
                     /translation="MTEAENAVAIVKEFLVASMIPDAERAATYMHPEVKITFTGGRAM
                     AGAADIAQFNGARYKWVKKALGKFDAVQHDDYVVIYSNGTLYGEWPDGRPFADNRFID
                     RFEVRDGKITRMDVWNDSAEWILAPDISR"
     gene            complement(517..1206)
                     /gene="yiiM"
                     /locus_tag="MOX77_003063"
     CDS             complement(517..1206)
                     /gene="yiiM"
                     /locus_tag="MOX77_003063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000559227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-N-hydroxylaminopurine resistance protein"
                     /protein_id="HCA3358526.1"
                     /translation="MHYPVDVFIGKIRDYDGSRPSAIAKVQIDGELMLTELGLAGDQQ
                     AEKKIHGGPDRALCHYPREHYADWIRQFPEQATLFCAPAFGENLSTDGMTEHNVFIGD
                     IYRWGEALIQVTQPRSPCFKLNFHFAISDMALLMQNSGKTGWLYRVIAPGKVSSDAPL
                     ELASRLSDVSVHEAGVIAWSMPFDDEQYHRLLSAAGLSASWSRTMQKRRLSGKIEDSA
                     RRLWGDKTPPK"
     gene            complement(1276..1896)
                     /gene="sodA"
                     /locus_tag="MOX77_003064"
     CDS             complement(1276..1896)
                     /gene="sodA"
                     /locus_tag="MOX77_003064"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010345169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Mn]"
                     /protein_id="HCA3358527.1"
                     /translation="MSYTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALE
                     NLPEFADLPVEELITKLDQVPADKKTVLRNNAGGHANHSLFWKGLKKGTTLQGDLKAA
                     IERDFGSVDNFKAEFEKAAATRFGSGWAWLVLKGDKLAVVSTANQDSPLMGEAISGAS
                     GFPILGLDVWEHAYYLKFQNRRPDYIKEFWNVVNWDEAAARFAAKK"
     gene            2225..3207
                     /locus_tag="MOX77_003065"
                     /pseudo
     CDS             2225..3207
                     /locus_tag="MOX77_003065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462935.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
     gene            3226..3741
                     /locus_tag="MOX77_003066"
     CDS             3226..3741
                     /locus_tag="MOX77_003066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HCA3358528.1"
                     /translation="MNTFRKGLDLLLGAICCLVLAIMVGIACWQVVSRYILGVPSTLT
                     EEMLRFLLVWVSMLGMAFVAGQKQHISLTILLDKVSPTIRGWWDIILQVIFIAFSIWV
                     LIIGGLKISAISMLQISPALGIPMGKIYYALPCAGILIILYGLLNIVDALKAIHSATD
                     TTEHTLEKSHD"
     gene            3734..5041
                     /locus_tag="MOX77_003067"
     CDS             3734..5041
                     /locus_tag="MOX77_003067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HCA3358529.1"
                     /translation="MIDPIFASCTLIAVFVVLLAMGAPIGICIVIASFSTMMLVLPFD
                     ISMFATAQKMFSSLDSFALLAVPFFVLSGVIMNSGGIAARLVNFAKLFTGKLPGSLSY
                     TNIVGNMMFGAISGSAIAASTSIGGVMVPMSAREGYDRGFAAAVNIASAPTGMLIPPT
                     TAFILYALASGGTSIAALFAGGLVAGVLWGVGCMLVTLVVAKRRNYRVFFTVQKGMAL
                     KVAVEAIPSLLLIVIIVGGIVQGIFTAIEASAIAVVYTLLLTIVFYRTLKIKDLPSIL
                     LQTVVMTGVIMFLLATSSAMSFSMSITNIPAALSDMILGISANKLVILLVITVFLLII
                     GAFMDIGPAILIFTPILLPIMTKLGVDPVHFGIIMIYNLAIGTITPPVGSGLYVGASV
                     GKVKVEDVIKPLMPFYGAIIGVLLLITYIPEITLFLPRLLGIM"
     gene            complement(5197..5880)
                     /locus_tag="MOX77_003068"
     CDS             complement(5197..5880)
                     /locus_tag="MOX77_003068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462932.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligogalacturonate-specific porin KdgM family
                     protein"
                     /protein_id="HCA3358530.1"
                     /translation="MDSVMRKSLFLLLPLVVTNAHAVYVDVRHEYLDDSKANYDRAYI
                     SHRFANGVGFAIEAISKSGGDDTNKAFNDLETQGNEYTISYQFKTGDVAWQPGFVLET
                     GNGYSTYKPYFRATWTLNESWWVGARYRFEYVRRSSDIRDDDTINRMDVWAGYKWNNF
                     DWTIEGIYKKADKYDLYDGGKDNYEYNFRTAYIIDQWSPFVEVGNVSVNSNSDERQTR
                     FRVGIGYTF"
     gene            6499..7533
                     /gene="rhaT"
                     /locus_tag="MOX77_003069"
     CDS             6499..7533
                     /gene="rhaT"
                     /locus_tag="MOX77_003069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-rhamnose/proton symporter RhaT"
                     /protein_id="HCA3358531.1"
                     /translation="MSNAITMGIFWHLIGAASAACFYAPFKQVKQWSWETMWSVGGIV
                     SWLILPWTISALLLPDFWAYYGQFNLSTLLPVFLFGAMWGIGNINYGLTMRYLGMSMG
                     IGIAIGITLIVGTLMTPIINGNFDVLIHTEGGHMTLLGVFVALIGVGIVTRAGQLKER
                     KMGIKAEEFNLKKGLLLAVMCGIFSAGMSFAMNAAKPMHEAAAALGVDPLYVALPSYV
                     VIMGGGALVNLGFCFIRLAKVQNLSIKADFSLARPLIISNILLSALGGLMWYLQFFFY
                     AWGHARIPAQYDYMSWMLHMSFYVLCGGLVGLVLKEWKNAGRRPVAVLSLGCVVIIIA
                     ANIVGLGMAS"
     gene            complement(7530..8378)
                     /gene="rhaR"
                     /locus_tag="MOX77_003070"
     CDS             complement(7530..8378)
                     /gene="rhaR"
                     /locus_tag="MOX77_003070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional activator RhaR"
                     /protein_id="HCA3358532.1"
                     /translation="MANQLILLKKDFFTDEQQAVTVADRYPQDVFAEHTHEFCELVMV
                     WRGNGLHVLNERPYRITRGDLFYIRAEDKHSYTSVNDLVLQNIIYCPERLKLNVNWQA
                     MIPGFQGAQWHPHWRLGSMGMNQARQVINQLEHESNGRDPLANEMAELLFGQLVMTLK
                     RHRYATDDLPATSRETLLDKLITALANSLECPFALDAFCQQEQCSERVLRQQFRAQTG
                     MTINQYLRQVRICHAQYLLQHSPLMVSEISMQCGFEDSNYFSVVFTRETGMTPSQWRH
                     LSNQSD"
     gene            complement(8531..9367)
                     /gene="rhaS"
                     /locus_tag="MOX77_003071"
     CDS             complement(8531..9367)
                     /gene="rhaS"
                     /locus_tag="MOX77_003071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional activator RhaS"
                     /protein_id="HCA3358533.1"
                     /translation="MTVLHSVDFFPSGKAPVAIEPRLPQAAFPEHHHDFHEIVIVEHG
                     TGIHVFNGQPYTISGGTVCFVRDHDRHLYEHTDNLCLTNVLWRSPDAFQFLAGLDQLL
                     PQEQDGYYPSHWRVNQSVLQQVRQLVGLMERAGDGMDAPAVANREILFMQLLVLLRRS
                     SLMEGATNNDAKLNQLMAWLEDHFAEEVCWEAVAEQFSLSLRTLHRQLKQHTGLTPQR
                     YLNRLRLIKARHLLRHSDHSVTEIAYRCGFGDSNHFSTLFRREFNWSPRDIRQGRDAI
                     IQ"
     gene            9655..11124
                     /gene="rhaB"
                     /locus_tag="MOX77_003072"
     CDS             9655..11124
                     /gene="rhaB"
                     /locus_tag="MOX77_003072"
                     /EC_number="2.7.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhamnulokinase"
                     /protein_id="HCA3358534.1"
                     /translation="MTFRHCVAVDLGASSGRVMLARYDSKHRTLTLREIHRFVNCLQK
                     TDGFDTWDIDSLEKDIRLGLKKVCNEGILIDSIGIDTWGVDYVLLDKQGQRVGLPVSY
                     RDNRTTGIMPQALVQIGKSEIYRRSGIQFLPFNTIYQLRALTKQQPELTAQVAHALLM
                     PDYFSYRLTGEMNWEYTNATTTQLVNINTDDWDDTLLAWTGAKKSWFGRPSHPGNVIG
                     DWICPQGNRIPVVAVASHDTASAVIASPLANKHSAYLSSGTWSLMGFESKKPYTTDEA
                     LAANITNEGGAEGRYRVLKNIMGLWLLQRVLKERRITDLPVLIAQTEALPACRFLINP
                     NDDRFINPDDMRAEIQAACRETDQPVPVSDAELARCIFDSLALLYADILHELANLRGE
                     KFTQLHIVGGGCQNALLNQLCANACGIRVMAGPVEASTLGNIGIQLMTLDELNNVDDF
                     RQVVSANYDLTTYIPNPDSEIARHVAQFQPKRQTKELCA"
     gene            11121..12380
                     /locus_tag="MOX77_003073"
     CDS             11121..12380
                     /locus_tag="MOX77_003073"
                     /EC_number="5.3.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-rhamnose isomerase"
                     /protein_id="HCA3358535.1"
                     /translation="MTTQLEQAWELAKQRFAAVGIDVEEALRQLDRLPVSMHCWQGDD
                     VAGFENPEGSLTGGIQSTGNYPGKARNATELRADLEQALRLIPGPKRLNLHAIYLESD
                     TPVARDQIKPEHFKNWVEWAKANRLGLDFNPTCFSHPLSADGFTLSHPDAKIRQFWID
                     HCKASRRVSAYFGEQLGTPSVMNIWIPDGMKDITVDRLAPRQRLLEALDEVISEKFDP
                     AHHIDAVESKLFGIGAESYTVGSNEFYMGYATSRQTALCLDAGHFHPTEVISDKISAA
                     MLYVPRLLLHVSRPVRWDSDHVVLLDDETQAIASEIVRHNLFDRVHIGLDFFDASINR
                     VAAWVIGTRNMKKALLRALLEPTDQLRQLEASGDYTARLAMLEEQKSLPWQAVWEMYC
                     QRHDTPAGSQWLDSVRTYEKEILSKRS"
     gene            12438..13264
                     /gene="rhaD"
                     /locus_tag="MOX77_003074"
                     /pseudo
     CDS             12438..13264
                     /gene="rhaD"
                     /locus_tag="MOX77_003074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462926.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="rhamnulose-1-phosphate aldolase"
     gene            13391..>14158
                     /locus_tag="MOX77_003075"
     CDS             13391..>14158
                     /locus_tag="MOX77_003075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HCA3358536.1"
                     /translation="MSFMLALPKISLHGAGAIADMVNLVANKQWGKALIVTDGQLVKL
                     GLLDSLFSALDEHQMSYHLFDEVFPNPTEELVQKGFAAYQSAECDYIIAFGGGSPIDT
                     AKAVKILTANPGPSTAYSGVGKVKNAGVPLVAINTTAGTAAEMTSNAVIIDSARKVKE
                     VIIDPNIIPDIAVDDASVMLEIPASVTAATGMDALTHAVEAYVSVGAHPLTDANALEA
                     IRLINVWLPKAVDDGHNLEAREQMAFGQYLAGMAFNSA"
BASE COUNT         3370 a         3756 c         3595 g         3437 t
ORIGIN      
        1 atagcccgct gggtgggttg cggctcacgc tgtggctacc gctgtacaag cgaacctaaa
       61 aaccatcggc ctgcgaatgc aggccgattt tttatctcgc cgtcgagatt taccgggaaa
      121 tgtctggcgc taaaatccac tcggcgctgt cgttccacac gtccatccgg gtaattttgc
      181 catcgcgcac ttcgaaacga tcgataaagc ggttatcggc aaacgggcga ccgtcgggcc
      241 attcgccata caacgtaccg ttggaataaa tcacaacgta atcatcatgc tgcaccgcat
      301 caaacttgcc cagcgccttc ttcacccact tgtagcgagc gccgttaaac tgcgcgatat
      361 ctgccgcgcc cgccatcgcc cggcctccgg tgaaggtaat tttcacctcc gggtgcatat
      421 acgttgcggc gcgttcagca tcgggaatca tcgaggccac caaaaattct tttacgatcg
      481 ccaccgcatt ttcagcttca gtcataatcc ttcctttcat tttggcggag ttttatcccc
      541 ccacagtcgt ctggcgctat cttcaatttt gccgctcaaa cgacgcttct gcatggtgcg
      601 gctccagctc gccgacagcc cggcggcgct cagcagccgg tgatattgtt cgtcatcaaa
      661 cggcatagac caggcgataa cacccgcttc atgaaccgag acatcgctca gacgcgacgc
      721 cagttccagc ggcgcatcgc tggagacctt acctggcgca atgacccgat acaaccagcc
      781 agtttttccg ctgttctgca taaggagggc catgtcgctg atggcaaagt ggaaattaag
      841 tttaaagcat ggagagcgcg gctgagtgac ctggatcaac gcctcgcccc agcggtagat
      901 gtcgccaata aacacgttgt gttcggtcat tccgtccgtc gacagattct cgccaaacgc
      961 cggggcgcaa aacagcgtcg cctgctcggg gaactggcga atccaatcag catagtgttc
     1021 gcgggggtaa tgacatagcg cgcggtcggg gccgccgtgg attttctttt cggcctgctg
     1081 atcgcctgcc agacccagct cggtcagcat gagttcgccg tcgatttgca ccttggcgat
     1141 agcgctcggg cggctgccgt catagtcacg aattttgcca ataaacacgt caaccggata
     1201 atgcatctgc tgctccttac gcggatacaa aaaaagcgag tcatcagact cgcttctaca
     1261 gacgtgcaat gcaaattatt ttttagcggc gaaacgcgct gctgcttcgt cccagttcac
     1321 cacgttccag aactctttga tgtagtccgg gcggcggttc tggaatttca gatagtaagc
     1381 gtgttcccac acgtccagac ccaggatcgg gaagccggaa gcgccggaaa tggcttcacc
     1441 catcagcggg gaatcctggt ttgcggtaga aaccacagcc agtttgtcgc ctttcagcac
     1501 cagccacgcc cagccggagc cgaaacgggt tgctgctgct ttttcgaatt cagctttgaa
     1561 gttgtcaacg gaaccgaagt cacgctcgat agccgctttc agatcgccct gcagagtggt
     1621 gccttttttc agccctttcc agaacaggct gtggttagcg tggccgcccg cgttgttacg
     1681 cagcacggtt tttttgtccg ctggcacctg gtccagttta gtaatcagtt cttcaaccgg
     1741 caggtcagca aactcaggca gattttccag cgccgcgtta gcgttgttga cataggtttg
     1801 atggtgtttg gtgtggtgaa tctccatcgt ctgcttatcg aagtgcggtt ccagtgcatc
     1861 ataagcgtac ggcagggatg gcagtgtata actcataatc atctccatta ttgtcgagcg
     1921 gcacagtgtt aacgccgcgt aagcagttgg ttcattatag ttaattaaat gatattgaaa
     1981 atgattatca atgccgtact ttttccaggg ttataaacgt tacggcatcc gctgaaaaaa
     2041 accgattttt acgcctccaa ccgaaaccgc ctgttgatga attcctggaa atcatgaaat
     2101 gtgaaacagg gtttcaaaat ctttcttttg gtgccaattt ttatcagcgg tggcaaaatc
     2161 aagaaggtta taatttcacc atgcaattac attcccggta aattattaca attgcgaggg
     2221 aattatgaag caacctggtt ttatacgtct ggctacgttg gccttactct ccacactctc
     2281 tttcttctcc cacggcgaaa ccattttgcg cctggcctac gctgaaaata gccagccggt
     2341 aaaagatgcg ttgcacttcc tggggcagca agttgaagag aaaacgggcg gcgatatcaa
     2401 agtacagtac ttcccggacg gacagcttgg cggcgagcgc gaactggtgg agttgacgca
     2461 ggtcggcgtc gtcgacatca ctaaagtgtc gtccgggctg atggagagtt tttcgcctga
     2521 gtacggcgtg ttctcacttc cctacctgtt tgccaccgtc gatgaatact accgcgtaat
     2581 ggataaccca caggtgagga gcctgtttat cagtccaccg ccgcacaggg ttttgtcggc
     2641 gtaggctggt atgattccgg cgcgcgtaat ttttatatga gcaaagcgcc ggttaaacgc
     2701 attgaggatt tacgcgggaa gaagatccgc gtcatgcaga gtgagacggc gatccaaact
     2761 ctcaaactgc tgggcgcttc gcccatcgcc atgagccagg cggaggtcta tacctcgtta
     2821 caacaaggca ttctcgacgg cgcggaaaac aatgagttcg ctctcaccat cgcccgccac
     2881 ggcgaagtcg cccgttatta cacctacgat atgcacaccc gcattcccga tatcctgcta
     2941 atgagtaccc tcacgctgga aaagctgacg ccggaacagc agcgcatcgt cgaagccgcc
     3001 atcaaggcgt cgatcgaatt tgagaaagcc gcatgggaca aggaaataga gaaaaccagg
     3061 ctggcggcgg taaaagattt caacgttgaa ttctacgaga tcgacaaaaa acccttccag
     3121 aaggcagtac agcctattta cgacggtctg aaaaacaaac cgcggcttta cgggctgtat
     3181 caacgtatcc agacagcaaa aaattaatct aatcaggaaa ttaagatgaa cacattcaga
     3241 aaaggacttg atttattgct gggcgctatc tgttgcctgg tgctggcgat aatggttggc
     3301 atcgcctgct ggcaggtggt gagccgctac attctgggcg ttcccagcac ccttaccgaa
     3361 gagatgctgc gatttctcct ggtgtgggta tcaatgctgg gcatggcttt tgtcgccggt
     3421 cagaaacagc atatcagtct gactatctta ctggataagg tgtcgccgac gattcgcggc
     3481 tggtgggata tcatcctgca ggtcattttt atcgcgtttt ccatttgggt attgattatc
     3541 ggcggcttaa agatttctgc gatttctatg ctgcaaatct cccctgcgct gggcattccg
     3601 atggggaaaa tttattacgc gctcccctgc gcgggcatac tgatcatcct ctatgggcta
     3661 ctgaatatcg ttgacgccct gaaagctatc cattccgcca cggataccac tgagcacact
     3721 ctggagaaat cacatgattg accctatttt tgcgtcctgt acgctaattg ccgtctttgt
     3781 tgttttactg gccatgggcg cgcctatcgg gatctgcatc gttatcgcct ctttcagcac
     3841 catgatgctg gtactgcctt tcgatatttc gatgttcgcc accgcgcaaa aaatgttctc
     3901 cagcctggac agttttgcct tgctggccgt gccgttcttc gttttgtccg gggtgatcat
     3961 gaatagcggg ggaattgccg cccgactggt caattttgcc aaactgttta ctggcaaact
     4021 gcccggctcg ctctcttaca ccaacatcgt cggcaatatg atgttcggtg caatttccgg
     4081 atcggcgatt gccgcctcaa cctctatcgg cggcgtgatg gtgccgatga gcgcgcgcga
     4141 aggttacgat cgcggttttg cggccgcggt gaatatcgcc tccgcgccga cgggaatgtt
     4201 aattccgccc accacggctt ttatccttta tgcgctggca agcgggggaa catcgattgc
     4261 cgctctgttc gccggcggtc tggtcgcggg agtgctgtgg ggcgttggct gtatgctggt
     4321 cacgctggtg gtcgctaagc gtcgaaatta tcgggttttc ttcaccgtcc aaaaaggcat
     4381 ggcgctaaaa gttgccgttg aggccattcc cagcctgtta ctgatcgtga ttattgtcgg
     4441 cggcattgtg caggggattt tcaccgccat tgaagcctcc gcgattgccg tggtgtatac
     4501 gttattgctg acgatagtgt tttaccgcac gctgaaaatt aaggatttgc cttcgatttt
     4561 gctccagaca gtggtaatga ccggggtcat catgttcctg ctggcaacct cttcggcgat
     4621 gtccttctcg atgtcgatca ccaatattcc tgcggcgctg agcgatatga tcctcggtat
     4681 ttccgccaat aaactggtta tcctgttagt cattaccgtc tttttgttga ttatcggcgc
     4741 atttatggat atcggtccgg ccattctgat ttttaccccg attctgctgc cgattatgac
     4801 taaactgggc gtcgatccgg tgcatttcgg cattatcatg atctataacc tggcgatagg
     4861 caccattacg ccgccagttg gcagtggttt atatgtcggg gcgagcgtcg gtaaggtcaa
     4921 agttgaggac gttatcaaac cgttgatgcc tttttacggc gcgattatcg gcgttctgtt
     4981 attaattacc tacattccgg aaatcacact gtttttaccc cgtctactgg gcatcatgta
     5041 aggcatagtt tcctgcacat ctcgttgccg gatggcgatt cgcgtcttat ccggccaacg
     5101 cgcgataata attatccgca ggtcatcacc aggtaaaaaa accggctacc tataaagtag
     5161 ccggaaaagg gaataaataa taaacaggga taatgattag aatgtgtagc ctatacccac
     5221 gcggaaacgg gtttgtcttt catcgctgtt gctattgacg gaaacattac ctacctcaac
     5281 gaatggcgac cattggtcaa taatataggc agttctgaag ttatattcat agttatcttt
     5341 gccgccatcg taaagatcat atttatcggc tttcttataa attccttcga ttgtccagtc
     5401 aaagttgttc catttataac ccgcccagac atccatacga ttgatggtat catcatcacg
     5461 gatatcagaa gaacggcgta catattcaaa acgatagcgc gcgccaaccc accaactttc
     5521 atttaatgtc cacgtcgcgc ggaagtaagg cttataggta gagtaaccgt tgcctgtttc
     5581 cagcacaaaa cccggttgcc aggcgacatc accggtttta aattggtagc ttatcgtata
     5641 ttcgttaccc tgtgtttcca ggtcattaaa cgctttattg gtgtcatccc cgcctgattt
     5701 tgagatagct tctatcgcaa aaccaacacc attcgcaaac cgatgagaaa tatacgcacg
     5761 gtcatagtta gctttactgt catcaagata ttcatgacga acatcgacat atactgcatg
     5821 cgcatttgtt acaacaagag gtaatagtaa gaaaagagat tttctcataa cagaatccat
     5881 ttaatttaaa attaaaacgt tgtttcatgt cagaccgtta caaccataat acgcaatgtg
     5941 aatggcgaca atataggcaa agatctttaa tttaaaattg ggataatgtt caaaaagcaa
     6001 aataaaataa atgaaattta tattcgtcat ataaaataaa aatcaaaact ccatcaacaa
     6061 cgccaatata gggatttcct tatatttata tttcattgat tcctaacgtt aatttcaata
     6121 tatttaaatt gtaaatacaa ataaaacaac taaataatta ctgtataact acccttttat
     6181 caaacggtaa gtcagactat tcccattatg tgatctcacg cagcgttttc tttgcattac
     6241 tgccagctaa gtcgtttcgt gtcgttatga tgaaggtatt ttagaaaaca aatattaccc
     6301 actgatttaa ataacatcca gacggtcacg atgcgctccg acttttttaa aacgtgaagt
     6361 taatcacttc attaacgtgc tgattgccag aatacaccca acggcggcaa tcgttataag
     6421 gttaccaggc tgcgtaattt ttaaactcat gcaaacggaa ggggtatccc gtccataaaa
     6481 aataatgagg aacatgtcat gagtaacgcg attacgatgg gtattttctg gcatctgata
     6541 ggggcggcca gtgcagcctg cttctatgcc ccgttcaagc aagtgaaaca gtggtcatgg
     6601 gaaaccatgt ggtcagtggg cggcatcgtc tcatggctta ttctgccgtg gacaattagc
     6661 gctctgttac tgcctgattt ctgggcctat tatgggcagt ttaacctctc caccctttta
     6721 ccggtttttc tgttcggcgc catgtggggc atcggcaata ttaactacgg cctgaccatg
     6781 cgttatctcg gcatgtcgat gggtatcggc atcgctatcg gcattacgct tatcgtcggc
     6841 acgctgatga cgcctatcat caacggtaac ttcgatgtat taatccatac cgaaggggga
     6901 cacatgacgc tacttggcgt ttttgtcgcg ctgatcggcg tcgggattgt gacgcgcgcc
     6961 ggacagttaa aagaacgcaa aatgggcatt aaagcggagg agttcaatct gaagaaaggg
     7021 cttctgctgg cagtgatgtg cggtattttc tcggcgggga tgtcttttgc catgaacgcc
     7081 gcgaaaccga tgcatgaagc tgctgccgcg cttggcgttg acccgctcta tgtcgcgctg
     7141 ccgagttacg tggtgattat gggcggcggc gcgctggtga acctcggttt ctgttttatc
     7201 cgcctggcaa aagtgcaaaa tctgtcgata aaagccgact tctcgctggc aaggccattg
     7261 attatcagca atattctgct gtccgcgctt ggcggtctga tgtggtattt gcagttcttt
     7321 ttctatgcct ggggtcacgc gcgcattccc gcgcaatatg actacatgag ctggatgctg
     7381 cacatgagct tctatgtgct gtgcgggggg cttgtcggtc tggtgctaaa agagtggaaa
     7441 aatgctggcc gccgtcccgt tgccgtatta agcctcggct gcgtggtaat tattatcgcg
     7501 gcgaatattg tcggtttagg catggccagt taatcgcttt gattactgag atggcgccat
     7561 tggctcggcg tcatcccggt ttcccgcgtg aacaccactg aaaaataatt actatcttca
     7621 aagccacact gcatcgaaat ctcgctaacc atcagcgggc tatgctgaag cagatactgc
     7681 gcgtggcaaa tacggacctg gcgtaaatat tgattaatcg tcatcccggt ttgggcgcga
     7741 aactgctgcc gcagcacccg ctcgctgcat tgttcctgct ggcaaaacgc atccagcgca
     7801 aagggacact caaggctatt agccaaagcg gtaattaatt tatccaacag ggtttctcgg
     7861 gaggttgccg gaagatcgtc ggtcgcgtag cgatgccgtt ttaacgtcat taccagttga
     7921 ccaaacagca attccgccat ctcattcgcc agcggatcgc gtccattact ctcatgttca
     7981 agctggttaa tgacctgccg cgcctgattc attcccatac tgcccagccg ccagtgagga
     8041 tgccactgcg ctccctgaaa gccgggaatc atcgcctgcc agtttacatt gagtttcaaa
     8101 cgctccgggc agtaaataat attttgcagc accagatcgt taacggaagt ataggagtgt
     8161 ttgtcttcag cacgaatgta aaacagatcg ccgcgggtaa ttctgtatgg gcgctcatta
     8221 agaacgtgta ggccattgcc ccgccagacc atcaccagtt cacaaaactc atgcgtatgt
     8281 tccgcaaaaa catcctgtgg atagcgatcg gcaaccgtaa cggcctgctg ctcatcagta
     8341 aaaaaatctt ttttcaaaag gattaactga tttgccaccg cagcacctca tgttgaatgc
     8401 ttgccggctg gcgctacgct tattctgtct accgctcgcc gccgtaggcc aggtaaggcg
     8461 cagccgccat ccggtattaa agggtataat tatcagcata ttggcgacga aaacgttgat
     8521 agcgttcgcg ttactggatt atcgcatcgc gtccctgacg gatatcccgc ggcgaccagt
     8581 taaattctcg gcgaaacaga gtcgaaaagt ggttactgtc gccaaaaccg cagcggtacg
     8641 cgatttctgt cacgctatga tcgctatggc gcaataaatg ccgggctttg atcaaacgca
     8701 ggcgattaag gtaacgttgc ggcgtcagcc cggtatgctg tttaagctga cgatgcagcg
     8761 tacgtagcga cagcgaaaac tgttcagcta ccgcctccca gcagacctcc tccgcaaaat
     8821 ggtcttccag ccatgccatc agttggttga gtttggcgtc gttattggtc gcgccttcca
     8881 tcaggctact gcggcgtaac aacaccagta gttgcataaa caaaatttcg cgattcgcca
     8941 cggcaggcgc atccatgccg tctccggcgc gctccatcag accgaccaac tggcgcacct
     9001 gctgcaacac actctgattc acccgccagt gagaaggata gtaaccatcc tgctcctgcg
     9061 gcagcaattg atccaacccc gccaggaact ggaaggcgtc cggtgaacgc cacagtacat
     9121 tcgtcaggca taggttgtcg gtatgttcat ataaatgccg gtcgtgatcg cgaacaaaac
     9181 acacggtacc gccgctgatg gtatacggct gcccgttgaa tacatgaatg cccgtaccgt
     9241 gttccacaat cacgatttca tgaaaatcat gatgatgttc agggaaagcg gcttgcggca
     9301 gacgaggttc aatcgccacg ggcgctttac ctgatggaaa aaaatccacg ctatgcagta
     9361 cggtcatggt tgcttcctcc tgaattcaac atgtccgaat agtaattaag ggttatcggc
     9421 ctcaccttaa atttttgacg ctaaagcgcg caaacatggt ctttttttca agaaaaggcg
     9481 ggaaaaagcg ggaaatgcgg acgacatcac accggcctat tagtagaaac tgtgaacgct
     9541 atcacgttca tctttgcctt gttgccagcg gctcattttc ctgtcagtaa cgagaaggta
     9601 ggtctttgag ggctttttta gactgtgcgc aatgactcta agaaggacct gattatgact
     9661 tttcgccatt gtgtcgcggt tgatctcggc gcatccagcg ggcgcgtgat gctggcgcgt
     9721 tacgacagca aacaccgtac cctgacgcta cgtgaaattc accgttttgt gaactgccta
     9781 caaaaaacag acgggtttga cacctgggac atcgacagtc tggaaaagga tatccgtctt
     9841 ggtctgaaga aagtctgcaa tgaaggcatt cttatcgaca gcatcggcat cgacacctgg
     9901 ggcgtcgatt atgtcctgct ggataaacaa ggtcagcgtg tcggcctgcc ggtctcctac
     9961 cgcgataacc gtaccacggg catcatgccg caagcgctgg tccagatcgg caaaagcgaa
    10021 atctatcgcc gcagcgggat tcagtttctg ccgtttaaca ccatctatca gctacgcgcg
    10081 ctgacgaaac aacagcctga gttaacggcg caggtcgctc atgcgctgct gatgcctgat
    10141 tatttcagct accgcctgac cggtgaaatg aactgggagt acaccaacgc cacgaccacc
    10201 cagttggtca atatcaatac cgatgactgg gacgataccc tgctggcgtg gaccggcgcg
    10261 aaaaagagct ggttcggccg cccctcgcac cctggcaatg ttatcggcga ctggatttgc
    10321 ccgcagggca accgtattcc ggtggtagcc gtcgccagcc acgataccgc cagcgccgtt
    10381 attgcctctc cgctggcaaa taaacatagc gcttacctgt cttcaggcac ctggtcgttg
    10441 atgggttttg aaagcaaaaa accctacacc actgatgagg cgctggccgc caatatcacc
    10501 aacgaaggcg gcgcggaagg gcgttatcgg gtactgaaaa acattatggg tttgtggctg
    10561 ctccagcgcg tgctgaaaga acggcgcatt accgatctgc ctgtgcttat cgcccaaaca
    10621 gaagcgctgc cggcctgccg tttcctgatt aacccgaatg acgatcgctt tatcaatcct
    10681 gacgatatgc gcgccgaaat ccaagccgcc tgtcgcgaga ccgaccagcc cgttcccgtc
    10741 agcgatgccg aactggcgcg ctgcattttc gacagtctgg cgctgttgta tgccgacatt
    10801 ctgcacgaac tggcaaatct gcgcggcgaa aaatttaccc aactgcatat tgtcggcggc
    10861 ggatgccaaa acgcgctact caaccagttg tgcgccaatg catgtggcat tcgcgtgatg
    10921 gccgggccgg ttgaagcctc cacccttggc aatattggta ttcagcttat gaccctcgac
    10981 gaattaaaca acgtcgatga tttccgtcag gtcgtcagcg ctaactacga cctgacaacc
    11041 tatatcccta atcctgatag tgaaattgcc cgccacgttg cgcagtttca acccaaacga
    11101 cagacaaagg agctttgcgc atgaccactc aactggaaca agcctgggaa ctggcaaaac
    11161 aacgtttcgc cgcagtaggt attgatgtcg aggaggcgct gcgccagctc gatcgcctgc
    11221 cggtttccat gcactgctgg cagggcgacg atgttgccgg attcgagaac ccggaaggtt
    11281 cgctgacggg cggaattcaa tcgaccggca actatccggg caaagcgcgt aacgccaccg
    11341 aactgcgcgc cgatctggaa caggcgctgc gtctgatccc aggccccaaa cgtctgaacc
    11401 tgcatgcgat ctatctggaa tccgatacgc cggttgcccg cgaccaaatc aaaccggagc
    11461 attttaaaaa ctgggtggag tgggcgaaag cgaaccgact ggggctggat ttcaacccca
    11521 cctgtttttc tcatccactg agcgctgacg gttttaccct ctctcatcca gacgcgaaaa
    11581 ttcgccagtt ctggatcgat cactgcaaag ccagccgccg cgtctcggca tactttggtg
    11641 agcagctcgg tacgccgtcg gtgatgaaca tctggattcc ggacggcatg aaagacatta
    11701 ccgtcgaccg tttagccccg cgccagcgcc tgctggaagc gctggatgag gtcattagcg
    11761 agaaattcga cccggcgcac cacatcgacg ccgttgagag caaactgttt ggcatcggcg
    11821 cggaaagcta caccgtcggc tccaatgagt tctacatggg ctacgccacc agccgtcaga
    11881 ccgcgctgtg tctggatgcg ggccacttcc atcccactga agtgatttcc gacaaaattt
    11941 ccgccgccat gctctatgtg ccacggctgc tgctgcacgt cagccgcccg gtacgctggg
    12001 atagcgacca cgtggtgctc ttggacgatg aaacccaggc aattgccagc gagatcgtcc
    12061 gtcataacct gttcgaccgt gtgcatatcg gcctggattt cttcgacgcc tctatcaacc
    12121 gtgtcgccgc gtgggttatc ggtacccgca acatgaaaaa agcgctactg cgcgctctgc
    12181 tggaacccac agatcaactg cgtcagcttg aggccagcgg cgattacacc gcgcgtctgg
    12241 cgatgctgga agagcaaaaa tctctgccgt ggcaggccgt ctgggaaatg tattgccagc
    12301 gtcacgacac gccggctggc agccagtggc tggacagcgt tcgcacctac gaaaaagaga
    12361 tcctgagcaa acgtagctga cagcgacacc tgatctgtag gccggataac cttcgggcaa
    12421 taaatgggaa cacgaatatg caaaatatta ccgattcctg gtttgtccag ggcatgatta
    12481 aagccacgtc tgatgcgtgg ctgaaagggt gggacgagcg taatggtggc aacctgacgc
    12541 tgcgcctgga tgaagcagac atcgcgccat ttagcgccga tttccacgaa aaaccacgct
    12601 atatcacgct aagtcaactc atgccgctgc tggcgaatac accgtttatc gttaccggct
    12661 ccggcaaatt cttccgcaac gttcagctcg atccggcagc caatttaggc gtggtcaaaa
    12721 tcgacagcga cggcgctggc taccacattc tgtggggctt aacccacgac gcggtaccca
    12781 cctctgaact cccggcgcac ttcctctccc actgcgaacg catcaaagcc acccacggca
    12841 aagaccgcgt cattatgcat tgccatgcga ctaacctgat cgccctcacc tacgtactgg
    12901 aaaacaacac tgcgctgatc acccgcaaac tgtgggaagg cagcaccgaa tgcctggtgg
    12961 tattcccgga cggtgtcggc attctgccgt ggatggtgcc aggcccgatg aaatcggcca
    13021 agccaccgcg caagaaatgc agaaacattc gctggtactg tggccgttcc acggcgtgtt
    13081 cggaagcgga cctacgctga atgaaacctt cggtttgata gataccgcag agaaatccgc
    13141 tgaggtatta gtcaaaatct attcgatggg cggtatgaag cagaccatca cgcgcgaaga
    13201 actggtcgca ctcggcaaac gatttggcgt gacaccgctg gccagcgccg tagagctgta
    13261 ctgatacctc ccaactcaac gccggatgcg gctttgcctt atccggccta caggtcggtg
    13321 cgcattttac cgtaggcccg ataagcgtag cgccatcggg caacagggaa tttttttaag
    13381 gagaatagtg atgagcttta tgttggcact gccaaaaatt agcctgcatg gcgctggagc
    13441 gattgccgat atggtgaacc tcgtggcgaa taagcaatgg ggcaaagcgc tgatcgttac
    13501 cgatggtcaa ctggtaaagc tgggcctgct ggatagcctg tttagcgcac tggatgaaca
    13561 tcaaatgtct taccacctgt ttgatgaggt gttcccaaac ccgacagaag agctggtgca
    13621 gaaaggtttt gcggcgtatc agagcgcaga atgtgactac attatcgcct tcggcggcgg
    13681 cagcccgatc gataccgcaa aagcggtgaa aattctgacc gccaacccag gtccatctac
    13741 cgcctactcc ggcgtcggca aagtgaaaaa cgccggcgta ccgctggtag cgattaacac
    13801 tacggcaggt accgcggcag agatgaccag caacgcggtg attatcgact ctgcccgtaa
    13861 ggtcaaagag gtgatcatcg acccgaatat catcccggat attgccgtgg atgacgccag
    13921 cgtcatgctg gaaatcccgg cgtctgtgac cgccgcaacc ggcatggatg ccctgaccca
    13981 tgcggtggaa gcctatgtct ccgttggcgc gcatccgctc accgacgcta acgcgctgga
    14041 agcgattcgc ttaatcaatg tgtggctacc gaaagcggtt gacgatggtc ataacctcga
    14101 agcccgtgag caaatggcat tcggccagta cctggcgggt atggcgttca acagcgcc
//
LOCUS       DAGWFR010000105        14113 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.107, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000105 DAGWFR010000000
VERSION     DAGWFR010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 14113)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14113)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14113
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.107"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(95..775)
                     /gene="pipA"
                     /locus_tag="MOX77_003076"
     CDS             complement(95..775)
                     /gene="pipA"
                     /locus_tag="MOX77_003076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector protease
                     PipA"
                     /protein_id="HCA3358537.1"
                     /translation="MLPVTYRLIPQSGVSTYGLNTADTPVFPDIPEHAPNPSRLRLAH
                     DSLAINSEFRLEPECVVEYLISGAGGIDPDTEIDDDTYDECYDELSSVLQNAYTQSET
                     FRRLMNYAYEKELHDVEQRWLPGAGEAFETTVAQEHFKLSEGRKVICLNLDDSDDSYT
                     EHYESNEGRQLFDTKRSFTHEVVHALTHLQDKEENHPRGPVVEYTNIILKEMGHPSPP
                     RMVYIFNK"
     gene            complement(998..1873)
                     /gene="pipB"
                     /locus_tag="MOX77_003077"
     CDS             complement(998..1873)
                     /gene="pipB"
                     /locus_tag="MOX77_003077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-2 type III secretion system effector PipB"
                     /protein_id="HCA3358538.1"
                     /translation="MPITNASPENILRYLHAAGTGTKEAMKSATSPRGILEWFVNFFT
                     CGGVRRSNERCFWEVIGKLTTSLLYVNKDAFFDGNKIFLEDVNGCTICLSCGAASENT
                     DPMVTIEVNKNGKTVTDKVDSERFWNVCRMLKLMSKHNIQQPDSLITEDGFLNLRGVN
                     LAHKDFQGEDLSDIDASNADFRETNLSNVNLVGANLCCANLHAVNLMGSNMTKANLTH
                     ADLTCANMSGVNLTAAILFGSDLTDTKLNGAKLDKIALTLAKALTGADLTGSQHTPTP
                     LPDYNDKTLFPHPIF"
     gene            2091..2411
                     /locus_tag="MOX77_003078"
     CDS             2091..2411
                     /locus_tag="MOX77_003078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358539.1"
                     /translation="MTSFISSIAYASSSLNKQLSLLSENLLKEKIISFNIFCSISTYS
                     RINVRRWRKNLMSRNTYTLKMLPQTEQNEKEERLPFTFPPKILVLSLVKGIRIAFYLI
                     KKVC"
     gene            complement(2421..2762)
                     /gene="sigE"
                     /locus_tag="MOX77_003079"
     CDS             complement(2421..2762)
                     /gene="sigE"
                     /locus_tag="MOX77_003079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system chaperone SigE"
                     /protein_id="HCA3358540.1"
                     /translation="MESLLNRLYDALGLDAPEDEPLLIIDDGIQVYFNESDHTLEMCC
                     PFMPLPDDTLTLQHFLRLNYASAVTIGADADNTALVALYRLPQTSTEEEALTGFELFI
                     SNVKQLKEHYA"
     gene            complement(2779..4464)
                     /gene="sopB"
                     /locus_tag="MOX77_003080"
     CDS             complement(2779..4464)
                     /gene="sopB"
                     /locus_tag="MOX77_003080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-1 type III secretion system effector
                     inositol phosphate phosphatase SopB"
                     /protein_id="HCA3358541.1"
                     /translation="MQIQSFYHSASLKTQEAFKSLQKTLYNGMQILSGQGKAPAKAPD
                     ARPEIIVLREPGATWGNYLQHQKTSNHSLHNLYNLQRDLLTVAATVLGKQDPVLTSMA
                     NQMELAKVKADRPATKQEEAAAKALKKNLIELIAARTQQQNGLPAKEAHRFAAVAFRD
                     AQVKQLNNQPWQTIKNTLTHNGHHYTNTQLPAAEMKIGAKDIFPSAYEGKGVCSWDTK
                     NIHHANNLWMSTVSVHEDGKDKTLFCGIRHGVLSPYHEKDPLLRQAGAENKAKEVLAA
                     ALFSKPELLNRALEGEAVSLKLVSVGLLTASNIFGKEGTMVEDQMRAWQSLTQPGKMI
                     HLKIRNKDGDLQTVKIKPDVAAFNVGVNELALKLGFGLKASDSYNAEALHQLLGNDLR
                     PEARPGGWVGEWLAQYPDNYEVVNTLARQIKDIWKNNQHHKDGGEPYKLAQRLAMLAH
                     EIDAVPAWNCKSGKDRTGMMDSEIKRELISFHQTHMLSAPGSLPDSGGQKIFQKVLLN
                     SGNLEIQKQNTGGAGNKVMKNLSPEVLNLSYQKRVGDENIWQSVKGISSLITS"
     gene            4796..4966
                     /locus_tag="MOX77_003081"
     CDS             4796..4966
                     /locus_tag="MOX77_003081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlcI/YnfO family protein"
                     /protein_id="HCA3358542.1"
                     /translation="MPAKPRTSKTVTKNIRFSYSMLEQIEFALKSEKTRNFSAWVKEA
                     CREKLCNTGHKL"
     gene            complement(4967..5077)
                     /locus_tag="MOX77_003082"
     CDS             complement(4967..5077)
                     /locus_tag="MOX77_003082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_447525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358543.1"
                     /translation="MTLQTNISRETKAAKTQEVYKHVVLFKMAAPSYIRR"
     gene            complement(5186..6655)
                     /locus_tag="MOX77_003083"
     CDS             complement(5186..6655)
                     /locus_tag="MOX77_003083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C69 family dipeptidase"
                     /protein_id="HCA3358544.1"
                     /translation="MKKYLAFAVTLLGMGKVIACTTLLVGNQASADGSFIIARNEDGS
                     ANNAKHKVIHPVAFHQQGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNS
                     AGVGMSATETIYNGRAALAADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQ
                     KGAGEGFGVAFIDSKEIWYLETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANY
                     MASPTLVSFAKKQGLYDPARGEFDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTV
                     VSEGETFSVFLTPITKISVAAVKNALRNHYQGTSHDPYASHNPQEPWRPISVFRTQES
                     HILQVRPKLPQAIGNVEYIAYGMPSLSVYLPYYQGMRHYQPGDDKGTDRASNDSTYWT
                     FRTLQTLVMQDYNTFAPDVQHAWKTFEQQTAKQQYKMEQSYLRLYASHPKEAQRLLQN
                     FEDKTMQNAQTLARRLTNNIITTMTYRTDMKYHFSSTQP"
     gene            complement(6828..8192)
                     /locus_tag="MOX77_003084"
     CDS             complement(6828..8192)
                     /locus_tag="MOX77_003084"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_447527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal sensor histidine kinase"
                     /protein_id="HCA3358545.1"
                     /translation="MVKLSMTLRLTISFIAILILACTGISWTLYNALSKELTYRDDMT
                     LINRAAQMQQLLLDGARPENLPLYFNRMVDTKQDILLIHSATGHNVAINHSGIPDQRF
                     NEIPLAKNITRETLFRQAVQGTELTAVRVNARSGDNPLTLTIARLATERRQMLAQYRR
                     NSLLISLIAILVCSALSPLVIRNGLRAITSLSRLTAATDSGTLRQPLAEQALPVELRP
                     LGQALNTMRQKLSDDFERLNQFADDLAHELRTPVNILLGKNQVMLSQERSAEEYQQAL
                     VDNIEELEGLSRLTENILFLARAEHQNIAVKKQPVSLNALVENMLDYLSPLAEEKHIC
                     FINQCQGTVWADEILLQRVLSNLLTNAIRYSDENAVIRIESAYDDNVAEIRVANPGSP
                     TADADKLFRRFWRGDNARYTAGFGLGLSLVNAIALLHGGSASYRYADEHNIFSVRLPD
                     SGDS"
     gene            complement(8185..8865)
                     /gene="hprR"
                     /locus_tag="MOX77_003085"
     CDS             complement(8185..8865)
                     /gene="hprR"
                     /locus_tag="MOX77_003085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000698203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor HprR"
                     /protein_id="HCA3358546.1"
                     /translation="MKILLIEDNQKTIEWVRQGLTEAGYVVDYACDGRDGLHLALQEH
                     YSLIILDIMLPGLDGWQVLRALRTAYQPPVICLTARDSVEDRVKGLEAGANDYLVKPF
                     SFAELLARVRAQLRQHVPVFTRLTINGLDMDATKQSVLRNGKPISLTRKEFLLLWLLA
                     SRAGEIVPRTAIASEVWGINFDSETNTVDVAIRRLRAKVDDPFEKKLIMTVQGMGYRL
                     QAETSQNG"
     gene            9001..9411
                     /gene="hiuH"
                     /locus_tag="MOX77_003086"
     CDS             9001..9411
                     /gene="hiuH"
                     /locus_tag="MOX77_003086"
                     /EC_number="3.5.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyisourate hydrolase"
                     /protein_id="HCA3358547.1"
                     /translation="MKRYILATAIASLVAAPAMALAAGSNILSVHILDQQTGKPAPGV
                     EVVLEQKKDNGWTQLNTGHTDQDGRIKALWPEKAAAPGDYRVIFKTGQYFESKKLDTF
                     FPEIPVEFHISKTNEHYHVPLLLSQYGYSTYRGS"
     gene            complement(9744..10256)
                     /locus_tag="MOX77_003087"
     CDS             complement(9744..10256)
                     /locus_tag="MOX77_003087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-monooxygenase reductase
                     subunit"
                     /protein_id="HCA3358548.1"
                     /translation="MQVDEQRLRFRDAMASLAAAVNIVTTAGHAGRCGITATAVCSVT
                     DTPPSVMVCINANSAMNPVFQGNGRLCINVLNHEQELMARHFAGMTGMAMEERFHQPC
                     WQNGPLGQPVLNGALASLEGEISEVQTIGTHLVYLVAIKNIILSQEGHGLIYFKRRFH
                     PVRLEMEAPV"
     gene            complement(10274..11635)
                     /gene="hpaB"
                     /locus_tag="MOX77_003088"
                     /pseudo
     CDS             complement(10274..11635)
                     /gene="hpaB"
                     /locus_tag="MOX77_003088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000801462.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-monooxygenase,
                     oxygenase component"
     gene            complement(11687..12127)
                     /gene="hpaR"
                     /locus_tag="MOX77_003089"
     CDS             complement(11687..12127)
                     /gene="hpaR"
                     /locus_tag="MOX77_003089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoprotocatechuate degradation operon regulator
                     HpaR"
                     /protein_id="HCA3358549.1"
                     /translation="MHDSLTIALLQAREAAMTYFRPIVKSHNLTDQQWRIVRILADSP
                     SMDFHELAFRTCILRPSLTGILTRMERDGLVLRLKPVNDQRKLYVMLTEQGQTLYARA
                     RSEVEEAYRKIEADFTPEKTQQLMLLLDDLIALGRQHPDSEAEA"
     gene            12402..13691
                     /locus_tag="MOX77_003090"
     CDS             12402..13691
                     /locus_tag="MOX77_003090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate degradation bifunctional
                     isomerase/decarboxylase"
                     /protein_id="HCA3358550.1"
                     /translation="MKGTVFAVALNHRSQLDAWQEAFSQPPYNAPPKTAVWFIKPRNT
                     VIRHGEPIPYPQGEKVLSGATVALIVGKTASRIRPEAAADYIAGYALANEVSLPEESF
                     YRPAIKAKCRDGFCPLGEMAPLSDVDNLTIITEINGREADHWNTADLQRSAAQLLSAL
                     SEFATLNPGDAILLGTPQNRVALRPGDRVRILAKGLPALENPVVAEDEFARHQTFTWP
                     LSATGTLFALGLNYADHASELAFTPPKEPLVFIKAPNTFTEHHQTSVRPNNVEYMHYE
                     AELVVVIGKTARKVSEAEAMEYVAGYTVCNDYAIRDYLENYYRPNLRVKSRDGLTPIG
                     PWIVDKEAVSDPHNLTLRTFVNGELRQEGTTADLIFSIPFLISYLSEFMTLQPGDMIA
                     TGTPKGLSDVVPGDEVVVEVEGVGRLVNRIVSEESAK"
     gene            13688..14113
                     /locus_tag="MOX77_003091"
                     /pseudo
     CDS             13688..14113
                     /locus_tag="MOX77_003091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460075.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
BASE COUNT         3502 a         3358 c         3417 g         3836 t
ORIGIN      
        1 gggcgcttag aatatagtta gaaaatactg ctagaacatt tcccgaaaaa acggactacg
       61 tgggttttta gtttcttttc gtttcttgat gtgtctattt attgaagatg tagaccattc
      121 tgggaggtga aggatgcccc atctctttca gaataatgtt ggtatattcg acaacagggc
      181 ctcttggatg attttcttct ttatcctgaa gatgggtcag tgcatgtaca acttcatgag
      241 taaatgaacg ttttgtgtca aaaagttgtc ttccttcgtt actttcataa tgttcggtat
      301 atgaatcatc agaatcgtcc agattgagac aaataacttt cctgccttct gaaagtttga
      361 agtgttcctg agccacggta gtttcaaagg cttcgcctgc ccccggtagc cagcgctgct
      421 ccacatcatg tagttctttt tcatatgcgt aattcatcag tctgcggaat gtttcgcttt
      481 gggtatacgc attttgaagt acggaggata gttcatcgta gcattcgtca taagtgtcgt
      541 catcaatttc tgtatcaggg tctattccac ccgcgcctga gataaggtac tccaccacac
      601 actctggctc cagacggaat tcactgttta tggcaaggct gtcatgagca aggcgtagcc
      661 gtgaggggtt tggtgcatgt tcgggaatat cggggaaaac aggtgtatct gcggtattta
      721 atccatatgt ggatactccg ctttgaggta ttaatctgta ggtgaccgga agcataattt
      781 cttattccct gactgcaatt atgaattatt taaattaaac aataatagtg tttttagtta
      841 atgtgccaca tacagataac gctatgattc aggcaaaacc aacaagtaat acgctgaaaa
      901 tgttatttat aatgaagctt aggggcgggg tttgtttaat aaaacaagga gggcttctgt
      961 ttgaatactt cttgtttata aaatcccttt atctcgacta aaatattgga tgggggaaaa
     1021 gcgttttatc attgtaatcc gggagtggag taggggtatg ttgactacct gtcagatcgg
     1081 ctcctgttaa tgctttcgct aaagttagag ctatcttatc taattttgca ccatttagtt
     1141 tggtgtcagt taagtctgag ccgaatagaa ttgcagcggt taagtttaca ccggacatgt
     1201 tagcgcaagt caggtctgcg tgagtcaggt ttgctttagt catgtttgaa cccattagat
     1261 ttacagcgtg tagatttgca caacacaaat ttgcaccgac taaatttaca ttagatagat
     1321 ttgtttcacg gaaatctgca ttagaagcat ctatgtctga caaatcttct ccctggaaat
     1381 ctttatgagc taggtttact ccgcgcaggt tcagaaaacc atcctcggtt ataagtgaat
     1441 caggctgttg tatattatgt ttactcatca gttttaacat tcgacataca ttccaaaatc
     1501 tctcactatc aactttatcc gttacagttt ttccattttt gttcacttca atagtgacca
     1561 tgggatccgt attttcggat gctgctccac atgacagaca tatagtacac ccgttgacat
     1621 cctccagaaa tattttatta ccatcgaaga aagcatcttt atttacatat aataatgatg
     1681 tggtcagttt tccaattacc tcccaaaagc atctttcatt gcttcttctt actccaccac
     1741 aggtaaaaaa attgacaaac cattccagta taccgcgtgg tgaagttgca cttttcattg
     1801 cttctttcgt accggtaccg gccgcatgca aatatcttaa tatattttct ggggacgcgt
     1861 tagttattgg cattttgatt ccttcttatg gaagtgagtc gattccttat aggtgtgagt
     1921 caagtcacat ttatacaagg aataataaaa aaagatataa ggtgattttt gtatttagag
     1981 ctttggttga gtatgagtag gtgtctggca tctgacaaga ggcgatgata tctgccataa
     2041 cggtgaagca gaagtaatat cacccgtgaa taataagatt atccttgcta ttgacttcct
     2101 tcatttccag catagcttac gcctcatcat cattgaataa acaattaagt ttgttgagcg
     2161 aaaatttact taaagaaaaa ataataagct ttaatatttt ttgcagcatt tcaacttata
     2221 gcagaataaa tgtgcgtaga tggcgtaaaa acctgatgag caggaatact tacacactaa
     2281 aaatgctccc gcaaacagag caaaatgaga aagaggaacg tttgcccttt acatttccac
     2341 caaagattct ggttttgtct cttgtaaagg gcatacgtat cgcgttttat ctcattaaga
     2401 aagtatgttg acgtattaaa ttatgcataa tgctctttca attgcttcac gtttgaaatg
     2461 aataattcaa aaccagtgag cgcctcttct tcggtactgg tttgcggcaa gcgataaagc
     2521 gccactaaag cagtattgtc tgcatcagcg ccgatagtga cggcgctggc gtagttaaga
     2581 cgtaaaaaat gctgcaaagt cagagtgtcg tcaggcagtg gcataaaggg acagcacatt
     2641 tccagtgtat gatcggattc attaaaataa acctgtatcc catcatcaat gataagcagt
     2701 ggctcatctt ctggcgcatc caggcctaac gcgtcatata aacgatttaa tagactttcc
     2761 atatagttac ctcaagactc aagatgtgat taatgaagaa atacctttta ctgactgcca
     2821 aatattttca tccccaactc gtttttgata ggaaagattg agcacctctg gcgataaatt
     2881 tttcattact ttgtttcccg ccccgcccgt attttgtttc tgaatctcca ggttaccgct
     2941 attcagtaat actttttgga aaattttctg tccaccgcta tccggaagac taccaggcgc
     3001 acttaacata tgggtctgat ggaaagaaat gagctctcgc ttgatttctg aatccatcat
     3061 ccctgtacga tctttgccgc ttttacaatt ccaggcgggc accgcgtcaa tttcatgggc
     3121 taacatggca aggcgttgtg cgagtttata gggttcgccg ccatctttat gatgttggtt
     3181 atttttccag atatccttaa tctggcgcgc taatgtattg acgacctcat aattatccgg
     3241 gtattgcgcc agccattcgc caacccagcc acctggtctg gcttcagggc gtaaatcatt
     3301 gcctaataac tgatgtagcg cttcggcatt atagctatct gatgctttaa ggccaaagcc
     3361 gagcttgagc gccagctcat taacacccac attaaatgcg gcgacgtccg gttttatttt
     3421 taccgtctgt agatcgccat ctttattgcg gatttttaaa tgaatcattt ttcccggctg
     3481 ggtcaacgat tgccatgcgc gcatttgatc ctcgaccata gttccctctt tgccgaaaat
     3541 attcgacgcg gtgagtaacc cgacggatac cagtttcagg cttaccgctt cgccctctaa
     3601 ggctctgtta agcaactcag gtttactaaa aagtgccgca gctaatactt ctttggcttt
     3661 gttttcagcg ccggcctgac gcagaagcgg atctttttca tgataggggg aaagcacacc
     3721 atgacgtatc ccgcaaaaaa gcgttttatc tttaccgtcc tcatgcacac tcaccgtgga
     3781 catccacaaa ttattggcgt gatgaatatt cttggtatcc caactgcata cgccctttcc
     3841 ctcataagca ctgggaaaga tatcttttgc gccgattttc atctctgcgg cagggagctg
     3901 cgtgttggta tagtgatgcc cgttatgcgt gagtgtattt tttatggttt gccagggctg
     3961 gttattgagc tgcttgacct gagcatctct aaacgctact gccgcaaagc gatgagcttc
     4021 ttttgcaggt aagccatttt gctgctgagt gcgtgctgca ataagttcga taagattttt
     4081 cttcaatgct tttgccgcag cttcttcttg ttttgttgct ggccggtccg ctttaacttt
     4141 ggctaactcc atttggtttg ccattgacgt tagaaccggg tcttgtttac ccagaacggt
     4201 tgccgcgacg gtaagaagat cgcgctgtaa gttatagagg ttatgcagcg agtggttaga
     4261 cgtcttctga tgctgtagat aattccccca tgtcgcgcca ggttctcgca ggacaataat
     4321 ttccgggcga gcgtcgggcg ctttagccgg cgctttgccc tggcctgaga gaatctgcat
     4381 tccgttgtat aaggtttttt gtaggctttt aaaagcctcc tgggttttta gtgaagctga
     4441 gtgatagaag ctctgtattt gcatagcgtt tttaatattc ctgaataggg gagtgggaac
     4501 attcaacagg gttaacaatc ttttaaaagg atgtgacttt tatgcaccag gaactttaaa
     4561 aaaatgtcct ttttaatgag gaaacgcttc tgatcaggcg gggaggcatc ctgacgtcca
     4621 tacgtagtgg cgatcatggg ggagatcggt acatcaaatg ttcataaaat ctacaaactt
     4681 cacaatttag ggcacaactt ttattgaaaa cccaccttct tgattcagat caaattcacc
     4741 gatttactcc tgcgtaaagt aacggcgtta catcaaatgt tatacaggtg tgtgtatgcc
     4801 agcaaagccc cggacgagta agaccgtgac gaagaatatt cgtttttcct attccatgct
     4861 tgaacagata gaattcgcgt tgaaatctga aaagacgcgg aatttttcag catgggtaaa
     4921 agaggcctgt cgggaaaagt tatgtaacac gggacataag ctgtagttat cgtcttatgt
     4981 aagagggggc ggccattttg aaaagaacaa cgtgcttata tacctcctgg gtctttgccg
     5041 cttttgtctc tctgctgata tttgtctgga gtgtcataaa ctatcctctc tatgaatcca
     5101 taataattat tgtcttttat atctggctaa ttctggtacc gctttatctt attgtgtatg
     5161 agtggctaat agattgtcat taaatttatg gctgcgtact tgaaaagtga tatttcatat
     5221 ctgtgcggta agtcattgtc gtaataatat tattggtcag gcgacgggcg agcgtctgcg
     5281 cattttgcat cgttttatct tcaaaatttt gcagtaagcg ttgtgcttct ttcggatgcg
     5341 acgcatataa tctcagatag ctctgctcca tcttatactg ttgcttagct gtttgctgtt
     5401 caaatgtttt ccaggcatgt tgcacatctg gcgcaaacgt attgtagtct tgcataacca
     5461 gtgtttgcag cgtgcggaat gtccagtagg tagagtcgtt gctcgcccga tcggttcctt
     5521 tatcatctcc gggttgataa tgacgcatcc cctggtaata ggggagatag acgctaagag
     5581 atggcattcc ataggcgatg tattctacgt tgccgatagc ctgcggtaat ttcggtctga
     5641 cctgtaaaat atgtgactcc tgggtacgaa aaacggatat aggtcgccat ggttcttgtg
     5701 gattatgact ggcataaggg tcgtgcgacg ttccctgata gtgattgcgt aacgcgtttt
     5761 ttactgccgc cacgctgatc ttcgttattg gcgttaaaaa aacagaaaat gtttcccctt
     5821 cgctaacgac cgtatccaga tgcggattaa actggtgttg tagcgtccag acgcgcggat
     5881 aattataggt ggtatcgttt ttgttatcct gcgaataggc ttgatgaaag tcgaattcgc
     5941 cgcgggccgg atcatataat ccctgctttt tcgcaaagct tactaacgtt ggtgacgcca
     6001 tataattcgc gttatcattc ggatcgtaat ggcgtaaacg tccctgattg gcggaaacga
     6061 aatagctatc tgccggaagt cgtactgcca gccattgatg tccgcttccc gtctccagat
     6121 accatatctc tttgctatca ataaacgcga cgccgaaacc ttcgcccgcg cctttttgtt
     6181 caataatatc tcccagtaat ttggcgccct gacgcgccga ttgcgccact ggcaggatca
     6241 cggactcaat ggcgtcttcc gtgattcccg tttttgtcac gtaaggatcg gcagccagcg
     6301 ccgctctgcc gttgtaaatg gtttccgttg cgctcattcc gacgcccgcc gaattgaaac
     6361 cggcttcacc catggcgtta tcgttagtat caaagtcatg aatcgccgta tagcgcatcg
     6421 ctgtctccgg aagcggccag ctaaaattgt tgcgatgtgc tttatactcg ccttgttgat
     6481 gaaacgcgac gggatgaata accttatgct tggcgttatt tgccgagcca tcctcgttgc
     6541 gcgcgataat aaaggagccg tcagccgaag cctgattgcc taccaaaagg gtagtacagg
     6601 cgatgacttt acccataccc agcagcgtaa cggcgaaagc aagatacttt ttcataaagg
     6661 ttcccactga ataacgcgtt atgggatgaa ttgaccctgg attggaaacc gagaaagtga
     6721 tcgagccagc aatattcttt accggcatcc tttattttct ttttattgag gttgtattga
     6781 taaccacagc cctgtggcag ggaaggggaa cagaacctgt actgacctta gctatcaccg
     6841 ctatcaggca gacgaaccga aaagatatta tgttcatcgg catagcggta agatgccgag
     6901 ccaccgtgca atagggcaat cgcgttaact aacgataacc ccaggccgaa accggcagtg
     6961 tagcgggcat tatctcctcg ccaaaaacgc cggaaaagct tatccgcatc ggcggtgggg
     7021 ctgcccggat tagcgacccg aatttctgca acgttatcat cataagcgct ttcaatacgt
     7081 atcacggcgt tttcatcaga ataacggatg gcattcgtca gcaggtttga gagcactctt
     7141 tgtaataata tttcgtcagc ccataccgtt ccctgacatt gatttataaa acagatgtgc
     7201 ttctcttcgg caagggggct aagataatcc agcatatttt cgaccagcgc attgagcgaa
     7261 acaggctgtt tttttaccgc tatattctgg tgctccgcgc gtgccagaaa gagaatattt
     7321 tctgtcagtc gcgacagtcc ctccagctct tcaatattat cgacaagggc ttgttgatac
     7381 tcttcggcgc tgcgttcctg actcagcata acctgattct tccccagtaa aatattaacc
     7441 ggcgtgcgca gctcatgcgc cagatcgtcg gcaaattggt tcaggcgttc aaaatcgtcg
     7501 gaaagcttct ggcgcatggt atttagcgct tgcccaagcg gcctgagctc gacgggtaac
     7561 gcctgttccg ccagcggctg gcgaagtgtg ccgctatctg tcgccgcggt gagtcggctg
     7621 agcgacgtaa tggcccgcag cccgtttctg atgactaatg gactgagcgc cgaacagacg
     7681 aggatcgcga taaggctaat cagcaaactg ttgcggcgat attgcgccag catttgccgc
     7741 ctttccgtcg ccagcctggc aatagtaagg gtcagcgggt tatcgccgct tctggcgttt
     7801 actcgtaccg cggtcagctc cgtgccttgt accgcctggc gaaataaggt ttcgcgggtg
     7861 atgtttttag ccagcggaat ctcgttaaag cgttggtcgg ggatgccgct atgattaatc
     7921 gcaacattat ggcctgttgc tgagtggatc aataagatat cctgcttcgt atccaccatc
     7981 cgattgaaat agagcggcag attttccggc ctggcgccat ccagtaacag ttgctgcatt
     8041 tgcgccgccc gatttattag cgtcatatca tcccgatacg ttaattcttt gctcagcgcg
     8101 ttatagagcg tccagctaat gccggtacag gcgaggataa gtatggcgat aaaagaaatt
     8161 gtcaggcgca gcgtcattga taacttaacc attctgcgac gtttccgcct gtaatcgata
     8221 acccatcccc tggacggtca taatgagctt cttttcaaat ggatcgtcta ctttggcgcg
     8281 cagccgacga atcgcgacat caacggtgtt ggtttcacta tcaaagttaa ttccccaaac
     8341 ttcgctggcg atcgcggttc ggggcacgat ttcccctgcc cgggacgcca gtaaccagag
     8401 gagcaggaat tctttgcggg tcagggaaat cggtttgcca tttcgtaaca ccgattgctt
     8461 tgtggcatcc atgtccagac cattgatcgt cagtcgggta aagaccggga catgctgtct
     8521 gagttgagct ctcacccggg ccagcagttc ggcgaaggaa aaaggcttaa caaggtaatc
     8581 attagcgccc gcctcaagac ctttgacgcg atcctcaacc gagtcgcgcg ccgtcaggca
     8641 aataacaggg ggctgatatg cagtgcgcaa cgcgcgtaaa acctgccatc catcaagccc
     8701 cggcagcata atatcaagaa taatcaatga ataatgttcc tgaagggcta ggtgtaatcc
     8761 gtctcgtcca tcacaggcat aatcaaccac atagcctgcc tccgtgagtc cctgacgtac
     8821 ccactcaatg gttttctggt tatcttcaat caataaaatc ttcatcaacg cagtatgcca
     8881 taggcttgtt agcgaatccg taaatctcca acaagatgac ataattgtca tgtccgtgta
     8941 aggttaatcc tggacgcgcc agatatattt tcctgcatca ataccgtaaa ggagtgaagc
     9001 atgaaacgat atatactggc taccgcgata gcgtctcttg ttgcagcccc ggcaatggcg
     9061 ctggccgctg gcagcaatat tctcagcgta catattctcg atcagcaaac aggcaaacca
     9121 gcgcccggcg tggaggtggt actggagcag aaaaaggata acggatggac gcaattaaac
     9181 accgggcata ccgaccagga tggacgaatt aaagcactgt ggcccgaaaa agctgccgcg
     9241 ccgggggatt atcgcgttat ttttaaaacc ggccagtatt ttgaaagtaa aaaactggac
     9301 acgtttttcc cggagattcc cgtcgagttt catatcagca aaacgaatga gcactatcat
     9361 gtgccgctgt tattaagtca gtatggttat tcaacctatc gcgggagcta atttagagcc
     9421 tatcctatta gggctatttt acttgccatt ttggtcctgg gcagtgctcg ccaaaacgcg
     9481 ttagcgtttt gaacgccgct tgcggcggcc cgaagggcga gcgtagcgag tcaaacctca
     9541 cgtacaacgt gtacgctccg gtttttgcgc gctgtccgtg tccaaacagg ctgcgccaat
     9601 aacgcctggt gggacaggct cttagatttt attaatcgcc gggatttatg gcgagcaaac
     9661 atcgcggcgg gaataaaaat cttcagcgta tcgactctcc tcccacaagc ggtggttatc
     9721 ccgcttgtgg gtatgagtga cggttaaaca ggcgcttcca tctcaagtct gaccggatga
     9781 aaacggcgtt tgaaataaat caggccatgc ccctcctggc taagaataat atttttgatc
     9841 gccaccagat acaccagatg cgtgccaatg gtttgtacct cgctgatctc gccttcaaga
     9901 ctggccagcg cgccgttaag taccggctgg cccagcggcc cgttttgcca acatggctgg
     9961 tgaaaacgct cctccatcgc catccccgtc ataccggcaa agtggcgcgc catcagctcc
    10021 tgctcatggt taagtacatt aatgcacagc ctgccgttgc cctgaaaaac ggggttcatg
    10081 gcgctattgg cattaataca taccatcacg gagggcggcg tatcagtgac tgagcaaacc
    10141 gctgttgcgg tgataccgca gcgtccggcg tgacccgccg tggttacgat gttgaccgct
    10201 gccgccagac ttgccatcgc atcgcgaaaa cgcagacgtt gttcatctac ttgcatgaga
    10261 acctcctgcc gcgttatttc agcagcttat ccagttgatt gatgtcgtcg ttattgtgca
    10321 aatgcgaaac cgtccagcca ttctgatcgt attcggagag gcagcgatcg accattgcca
    10381 tcatcttatc catattgccg gagctctggg cctgacgcag acactgcaga cgaatttcat
    10441 cctggctgcc cgagtagtta atctcgtaca gctcatggcg accgccaaac tcgctgccga
    10501 tggcatccca catcaattta agaattttga tacgttcaac atggtccatt ccgttagagc
    10561 cgcgtacgta tttcgccagg tactggtcga tttgcggatt attcagatcg cgggcgctgg
    10621 aaggcaggta aatcaggccg ctggtaacgt tacgttcaat aatattttta attttcgcgt
    10681 aggccattgg ggccatcaca cgataggttt gcagcgcggc gtggtccggt agccaggcgc
    10741 cgtttaccca cggggttgct tcagaacaca tagaatcgct caatgcccag aacatattgc
    10801 gccaggccac gacttcgccg agatcggcct gcacgccccg gaactctacg gtacccgtac
    10861 attcgagcga ttttttcagc agcgcggtaa tgaaatcaag ttttaccgcc agacgaacac
    10921 aggcttgcag tggatacata cgggcaaagc cgccttccat cgtccagcga cgacaacgat
    10981 cgaaatcacg gtaaattaat acgttttccc acgggatcag caccttgtcc atcaccagaa
    11041 tggcatcgtt ttcatcaaaa cggctggaga ggggataatc aaacggcgag cccgtcgcgc
    11101 ccgcgaccat ttcatacgag gcgcgcgaaa taagttttac gccttcggca tccattggcg
    11161 cgacaaacat cagagcaaaa tccgggtttt cgcccatcac ctgggctgag ccgaaaccaa
    11221 tcatgttgta gtgagtcagg gcggagttag tggcgacaac tttcgccccg ctgacaataa
    11281 tcccggcgtc cgtctctttc tccagcttga tatagacgtc tttcacttcg tcggcaggtt
    11341 tgtggcggtc aatgggcggg ttgacgattg catggttaaa gtacaggccg gtctcctgaa
    11401 tacgggtgta ccagttacgg gcgttctgct caaactggcc gtagaaggct gggttagcgc
    11461 ccagagcgca gccaaaggcg gctttgtaat ccggtgtgcg tcccatccag ccgtaactca
    11521 ggcgtgacca ctcggcgata gcatcacgct gttggcgcag atcgtctgcg cttttcgcca
    11581 cgcggaaaaa tttatgcgta taaccgccgc tgccggtatc ggtattccag cacagggtgt
    11641 aagcgggagg ggattcccgt gtcggcggcg tgggaaggta agaatactat gcttccgctt
    11701 cgctatcagg atgctggcgc cccagagcaa taagatcgtc cagcagcagc atcaattgct
    11761 gtgttttttc gggcgtgaaa tcggcctcaa tttttcgata agcctcttct acctcgctcc
    11821 gggcacgggc gtacaacgtt tgtccctgct ccgtcaacat gacatataac ttacgctgat
    11881 cgttaaccgg cttgagtcgc aacaccagtc cgtctcgctc catgcgcgtc aatattccgg
    11941 tcagacttgg acgcaaaata caggtacgaa aggccagctc gtgaaaatcc atagaggggc
    12001 tatcggccag gattcgcaca atgcgccatt gctggtcggt cagattgtgg cttttaacga
    12061 tggggcggaa ataggtcatt gccgcttcgc gcgcctgaag caaggcgatg gttaatgaat
    12121 catgcataag cgtttctctt ttgcagaatt attaatacct gaataatcgt gtttaccgat
    12181 gtgagctatg acatctgttt tatgtccaaa gtttaataga aacaaggggt tttatttaac
    12241 tatttgatat atatgtattt aataataaat ttgtgaaaat attgttaatc acatcataaa
    12301 tactttactt aagcttgcta aatgtacagc gaaagcataa atctaatcat taatatgtta
    12361 atgaaatcac agcccgttaa atcggcctga ggagtttatg tatgaagggt actgttttcg
    12421 ccgttgcgtt aaaccatcgc agccagcttg atgcctggca agaggctttc tctcagcctc
    12481 cctataatgc gccgcctaaa accgcagtgt ggttcatcaa gccgcgtaat acggtgattc
    12541 gtcacggcga acccattcct tatccgcagg gagaaaaggt actgagcggc gcgacagtgg
    12601 cgctcattgt ggggaaaacc gccagccgga tacgccctga agcggcggcg gactatatcg
    12661 ccgggtatgc gctggctaac gaggtcagcc tgccggaaga gagcttttat cgcccggcga
    12721 ttaaagcgaa atgtcgcgat ggcttttgcc cgctgggtga aatggcgccg ctgagtgatg
    12781 tggataatct caccattatc actgaaatca acggacgaga agcggaccac tggaatactg
    12841 ccgatttaca gcgtagcgcc gcacaactgc ttagcgcgtt aagtgagttc gctacactta
    12901 accctggcga tgcgatctta cttggtacgc cgcagaatcg cgttgcgctg cgtcccggcg
    12961 atcgggtgcg tattctggcg aaaggtttac ccgcgctgga aaatccggtt gtcgcagaag
    13021 atgaattcgc ccgccaccag acgtttacgt ggccgctgtc agcgacggga acgttatttg
    13081 cgctggggtt gaactacgcc gatcacgcca gcgagctggc atttacgccg ccgaaagagc
    13141 cgctggtatt tatcaaagcg ccaaacacct ttaccgaaca tcaccaaacg tcggtgcgcc
    13201 cgaacaacgt cgaatatatg cactacgaag ccgagctggt cgtggtgatt ggcaaaacgg
    13261 cgcgtaaggt gagcgaagcc gaagccatgg agtatgtggc cggttacacc gtctgtaacg
    13321 actacgcgat ccgcgactat ctggaaaact actaccgtcc gaatctgcgg gtaaaaagcc
    13381 gcgacggcct gacgccgata ggcccgtgga ttgtggataa agaggcggtt tctgatccgc
    13441 acaacctgac gttacgcacc tttgtcaacg gtgagctgcg gcaggaaggg acgaccgccg
    13501 atctgatctt cagcatcccg ttcctgattt cttatctgag cgaatttatg acgttgcaac
    13561 cgggcgacat gattgccacc ggtacgccga aagggctgtc cgatgtggtg ccgggggatg
    13621 aagttgtcgt tgaagtagaa ggcgtgggtc gcctggttaa ccgaatcgtc agtgaggaga
    13681 gcgcaaaatg aagaaaataa atcattggat taacggcaaa aacgttgcag gtaacgacta
    13741 cttccagacc actaacccgg cgaccggtga tgtgctggcg gaagtagcct ccggcggtga
    13801 agcagaagtg aaccaggctg tcgcggcggc aaaagaggcg ttcccgaaat gggccaacct
    13861 gccgatgaaa gagcgcgcgc gcctgatgcg ccgccttggc gacctgattg accagcatgt
    13921 gccggaaatc gcggcgatgg aaaccgccga caccggcctg cctattcacc agactaaaac
    13981 gtgctgatcc cgcgcgcctc gcataacttc gaattcttcg ccgaagtgtg ccagcagatg
    14041 aacggcaaga cctatccggt tgacgataaa atgctcaatt atacgctggt gcagcccgtc
    14101 ggcgtctgcg cgc
//
LOCUS       DAGWFR010000106        13972 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.108, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000106 DAGWFR010000000
VERSION     DAGWFR010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 13972)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13972)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13972
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.108"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..106
                     /locus_tag="MOX77_003092"
     CDS             <1..106
                     /locus_tag="MOX77_003092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="2-keto-3-deoxygluconate permease"
                     /protein_id="HCA3358551.1"
                     /translation="VAASTIITALCAPFLTVWIKKRYDRKLNPAAAGG"
     gene            174..2102
                     /locus_tag="MOX77_003093"
     CDS             174..2102
                     /locus_tag="MOX77_003093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent transcriptional regulator"
                     /protein_id="HCA3358552.1"
                     /translation="MNKTKDIAASPLCFVSPYPQLAKAAEALVAQLDYAVTIHQTTLN
                     RILDELPLLESRGHQVLISRGGCAEILKKHSKLPVVEIKMSGYDILDALIPFKGQKGT
                     VGIVGFSSVIKGCARVAEQLNINYKIFTLQGNDKETISCLKRQLASTPLDCIVGDTVC
                     QDYFSPLGSQFRLLDSSPASITEALEEARSLYLAFRSQLLERHHLQLILDQFDKAVIT
                     LDDTGALLHYNKYASQLFKINASGEIYDASFLKQVLHQERHTLREGKTVSAKVVDTPQ
                     GAMVVNLYPVFAARQLSRVVLTMQTVSSLQGAEHHVRRQELSRRGLSARYHFDDLLTE
                     NPEMLRRLAIIKNYAGTDATILINGESGTGKEVLAQSIHNASQRVNGLFVAINCGAMA
                     TQILESELFGYVAGAFTGASPKGKIGLFELAHHGTIFLDEISELDKPLQTRLLRVLQE
                     RQIMRLGSDQMIPVDIRVIAATNQTLTKLIADGTFREDLYYRLNVLKVTTIPLRKRPE
                     DIKAIGLSLLTSFSQHYKRPALTLTPALWQELQRFAWPGNVRQLSNIIERLVLSIDHS
                     PATLDEGRLLLDDLEEGSRREPSTCHDCQMLAGDYKTIRLRILRKLLEAERDNKSLVA
                     KRLNVDRTSLTRWIRESA"
     gene            2195..2668
                     /locus_tag="MOX77_003094"
     CDS             2195..2668
                     /locus_tag="MOX77_003094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon-containing protein"
                     /protein_id="HCA3358553.1"
                     /translation="MNKVAQYYRELVASLSERLRNGERDIDALVEQARQRVMQTGELT
                     RTEVDELTRAVRRDLEEFAMSYEESQEDSVFLRVIKESLWQELADITDKTQLEWREVF
                     QDLNHHGVYHSGEVVGLGNLVCEKCHYHLAVYTPDVLPLCPKCGHDQFQRRPFEP"
     gene            complement(2707..3000)
                     /locus_tag="MOX77_003095"
     CDS             complement(2707..3000)
                     /locus_tag="MOX77_003095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001785127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358554.1"
                     /translation="MLRPCIIHDPDSDAGIHMLSWHGSPLIRFYTEAWCPTCAEFVYA
                     GFSNDDEGAAQFLSSLAEWNQPGVGLNEAFTALTPLFSLFADGYYRLEAQLHS"
     gene            complement(3119..4054)
                     /gene="rihA"
                     /locus_tag="MOX77_003096"
     CDS             complement(3119..4054)
                     /gene="rihA"
                     /locus_tag="MOX77_003096"
                     /EC_number="3.2.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine-specific ribonucleoside hydrolase
                     RihA"
                     /protein_id="HCA3358555.1"
                     /translation="MALPIIIDCDPGHDDAIALVLALASPELEVKAITSSAGNQTPEK
                     TLRNVLRMLTLLKRPDIPVAGGAVKPLMRELIIADNVHGESGLDGPALPEPSFAPQSG
                     TAVELMAKTLRESAQPVTIVSTGPQTNVALLLNSHPELHTKIARIVIMGGAMALGNWT
                     PAAEFNIYVDPEAAEIVFQSGIPVVMAGLDVTHKAQIHAADIERFRDIGNPISTIVAE
                     LLDFFFEYHKDEKWGFVGAPLHDPCTIAWLLKPEIFTTVERWVGVETQGKYTQGMTVV
                     DYYFLTGNKPNATVMVDVDRQGFVDLLAERLQYYA"
     gene            complement(4171..4896)
                     /gene="gltL"
                     /locus_tag="MOX77_003097"
     CDS             complement(4171..4896)
                     /gene="gltL"
                     /locus_tag="MOX77_003097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020245804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate/aspartate ABC transporter ATP binding
                     protein GltL"
                     /protein_id="HCA3358556.1"
                     /translation="MITLKNVSKWYGHFQVLTDCSTEVKKGEVVVVCGPSGSGKSTLI
                     KTVNGLEPVQKGEITVNGIIVNDKKTDLAKLRSRVGMVFQHFELFPHLSIIENLTLAQ
                     VKVLKRDKAAARDKGLKLLERVGLSAHANKFPAQLSGGQQQRVAIARALCMDPIAMLF
                     DEPTSALDPEMINEVLDVMVELANEGMTMMVVTHEMGFARKVANRVIFMDEGKIVEDS
                     PKEEFFANPSSDRAKDFLAKILH"
     gene            complement(4896..5570)
                     /gene="gltK"
                     /locus_tag="MOX77_003098"
     CDS             complement(4896..5570)
                     /gene="gltK"
                     /locus_tag="MOX77_003098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate/aspartate ABC transporter permease
                     GltK"
                     /protein_id="HCA3358557.1"
                     /translation="MYEFDWSSIIPSLPYLLAGLVITLKITVTAVVVGIVWGTILAVM
                     RLSSFAPIAWFAKAYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKTDIRLISAMV
                     AFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLT
                     QGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGAVYFVISLSASLLVSY
                     LKKRTV"
     gene            complement(5570..6310)
                     /gene="gltJ"
                     /locus_tag="MOX77_003099"
     CDS             complement(5570..6310)
                     /gene="gltJ"
                     /locus_tag="MOX77_003099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate/aspartate ABC transporter permease
                     GltJ"
                     /protein_id="HCA3358558.1"
                     /translation="MSIDWNWGIFLQEAPFGNTTYLGWLWSGFQVTVALSITAWIIAF
                     LVGSIFGILRTVPNRFLSGLGTLYVELFRNVPLIVQFFTWYLVVPELLPEDLGMWFKA
                     ELDPNIQFFLSSMICLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVL
                     LPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLA
                     YVLINAVIMLVMSLVERKVRLPGNVGSK"
     gene            complement(6470..7378)
                     /locus_tag="MOX77_003100"
     CDS             complement(6470..7378)
                     /locus_tag="MOX77_003100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HCA3358559.1"
                     /translation="MQLRKLTTAMLVMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVV
                     GHRESSVPFSYYDNQQKVVGYSQDYSNAIVEVVKKKLNKPDLQVKLIPITSQNRIPLL
                     QNGTFDFECGSTTNNLERQKQAAFSDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVTS
                     GTTSEILLHKLNEEQKMGMRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKK
                     PDNWEIVGKPQSQEAYGCMLRKNDPEFKKLMDDTIAQAQTSGEAEKWFDKWFKNPIPP
                     KNLNMNFELSDEMKALFKAPNDKALN"
     gene            complement(7796..9334)
                     /gene="lnt"
                     /locus_tag="MOX77_003101"
     CDS             complement(7796..9334)
                     /gene="lnt"
                     /locus_tag="MOX77_003101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HCA3358560.1"
                     /translation="MAFASLIERQRIRLLLALLFGACGTLAFSPYDVWPAAIVSLIGL
                     QALTFNRRPLQSAAIGYCWGLGLFGSGINWVYVSIAQFGGMPGPVNVFLVVLLAAYLS
                     LYTGLFAGILSRLWPKTNWLRVAIAAPAIWQITEFLRGWVLTGFPWLQFGYSQVDGPL
                     KGLAPVMGVEAINFLLMMVSGLLALALATRNWRPLAVAVILFALPFPLRYIQWFTLEP
                     TKATQVSLVQGDIPQSLKWDENQLLNTLNIYLNETRPELGKSQIIIWPESAIPDLEIN
                     QQPFLRSLDEMLREKNSTLITGIVDARLNKQNRYDTYNTIITLGKDNPYSYDSPNRYN
                     KNHLVPFGEFVPLESILRPLAPFFDLPMSSFSRGPYIQPQLHAHDYKLTAAICYEIIL
                     GEQVRDNFRPDTDYLLTISNDAWFGKSIGPWQHFQMARMRSLELARPLLRSTNNGITA
                     VIGPQGEIQAMIPQFTRQVLTTKVTPTTGLTPYARTGDWTVWLITVLFGFGALVMSLR
                     QRRK"
     gene            complement(9354..10232)
                     /gene="corC"
                     /locus_tag="MOX77_003102"
     CDS             complement(9354..10232)
                     /gene="corC"
                     /locus_tag="MOX77_003102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459659.1"
                     /note="CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter
                     (CNNM) family, and was characterized as belonging to a set
                     of three proteins, at least one of which must be present
                     for CorA to function; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CNNM family magnesium/cobalt transport protein
                     CorC"
                     /protein_id="HCA3358561.1"
                     /translation="MSDDNSHSSDTVNSKKGFFSLLLSQLFHGEPKNRDELLALIRDS
                     GQNELIDEDTRDMLEGVMDIADQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSR
                     FPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVLRTAVVVPESKRVDRMLKEFRS
                     QRYHMAIVIDEFGGVSGLVTIEDILELIVGEIEDEYDEEDDIDFRQLSRHTWTIRALA
                     SIEDFNDAFGTHFSDEEVDTIGGLVMQAFGHLPARGETIDIDGYQFKVAMADSRRIIQ
                     VHVRIPDDSPQPKLDE"
     gene            complement(10390..10863)
                     /gene="ybeY"
                     /locus_tag="MOX77_003103"
     CDS             complement(10390..10863)
                     /gene="ybeY"
                     /locus_tag="MOX77_003103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HCA3358562.1"
                     /translation="MSQVILDLQLACENHAGLPDEAQFQRWLDGVIPQFQEEAEVTIR
                     LVDEAESHDLNLTYRGKDKPTNVLSFPFEAPPGIEMPLLGDLIICRQVVEQEAQEQSK
                     PLEAHWAHMVVHGSLHLLGYDHIDDDEAEEMESLETEIMLAMGYEDPYIAEKIAE"
     gene            complement(10860..11906)
                     /locus_tag="MOX77_003104"
     CDS             complement(10860..11906)
                     /locus_tag="MOX77_003104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005225825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HCA3358563.1"
                     /translation="MNIDTREITLEPADNARLLSLCGPFDDNIKQLERRLGIEINRRD
                     NHFKLTGRPICVTAATDILRSLYVDTAPMRGQTQDIEPEQIHLAIKEARVLEQSAESV
                     PDYGKAINIKTKRGVIKPRTPNQAQYIANILDHDITFGVGPAGTGKTYLAVAAAVDAL
                     ERQEIRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFEMLGFEKVEKLIER
                     NVIEVAPLAYMRGRTLNDAFIILDESQNTTIEQMKMFLTRIGFNSKAVITGDVTQIDL
                     PRNTKSGLRHAIEVLAEVDEISFNFFHSEDVVRHPVVARIVNAYEAWEEAEQKRKAAL
                     AAERKREAQEQEQK"
     gene            complement(12111..13535)
                     /gene="miaB"
                     /locus_tag="MOX77_003105"
     CDS             complement(12111..13535)
                     /gene="miaB"
                     /locus_tag="MOX77_003105"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HCA3358564.1"
                     /translation="MTKKLHIKTWGCQMNEYDSSKMADLLDATHGYQLTDVAEEADVL
                     LLNTCSIREKAQEKVFHQLGRWRLLKEKNPDLIIGVGGCVASQEGEHIRQRAHYVDII
                     FGPQTLHRLPEMINSVRGDRSPVVDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCNKY
                     CTYCVVPYTRGEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAWRGENYDGTTGTF
                     ADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQSGSDRVLNL
                     MGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTDDFEKTMKLIADVNFDMSY
                     SFIFSARPGTPAADMVDDVPEEEKKQRLYILQERINQQAMAWSRRMLGTTQRILVEGT
                     SRKNIMELSGRTENNRVVNFEGTPEMIGKFVDVEITDVYPNSLRGKVVRTEDEMGLRV
                     AETPESVIARTRKENELGVGFYQP"
     gene            13679..>13972
                     /locus_tag="MOX77_003106"
     CDS             13679..>13972
                     /locus_tag="MOX77_003106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HCA3358565.1"
                     /translation="MTNQPTEIAIVGGGMVGGALALGLAQQGFTVMVIEHAAPAPFVA
                     DSQPDVRISAISAASVALLKGLGVWEAVQGMRSHPYRRLETWEWENAHVVFDAA"
BASE COUNT         3270 a         3658 c         3779 g         3265 t
ORIGIN      
        1 ggtggcggcc tcgacgatta ttaccgctct gtgcgccccc ttcctgaccg tatggataaa
       61 aaaacgctac gatcgtaaac tgaacccagc cgccgcaggc ggttagcgtt tcggcggaaa
      121 ataaatcacg acgggcggtc tcgcccgttt ataaaccaac aggatggtga gtgatgaata
      181 agacgaaaga tatagccgca tctcctctct gttttgtctc tccttatccg caactggcaa
      241 aggctgccga ggcgctggtc gcgcagttgg attacgccgt cactattcat caaacgacgc
      301 ttaatcgtat cctggatgag ctacctttat tagagtcccg tgggcaccag gtactgatta
      361 gtcgtggcgg ctgtgcggaa atattaaaaa agcacagtaa attaccggta gtcgaaatta
      421 aaatgtccgg ctacgacatt cttgatgcgc ttatcccttt taaaggacaa aaaggcactg
      481 tcggtattgt cggcttttcc agtgtgatca aaggatgcgc gcgcgtagcg gaacagttaa
      541 atattaacta taaaattttt accttacagg gaaatgataa agaaacgatt tcttgcctga
      601 agcggcaatt agcgtccacg ccattagatt gcattgttgg cgataccgtt tgtcaggatt
      661 atttttcacc gctgggctcg caattccgtt tacttgattc cagccccgcc tcaataaccg
      721 aagctctgga agaagcccgc tcattatatc tggcttttcg cagccaatta ctggagcgcc
      781 atcatctgca gctgattctc gatcagtttg ataaagctgt tatcacgctt gatgataccg
      841 gcgcgttact gcattacaat aaatatgcga gccaactttt taaaattaac gcctccggtg
      901 aaatttatga cgcatctttc ctgaaacagg tattgcacca ggagcggcat acattacgtg
      961 agggaaaaac cgtcagcgcg aaagtcgtcg atacaccgca aggcgcgatg gtagttaatc
     1021 tgtatccggt atttgcggcc agacagttaa gccgggtggt gttgacgatg caaaccgtct
     1081 ccagtttaca gggggcggaa catcatgttc gccgccagga actgtctcgc cgcggcttga
     1141 gcgcccgcta tcatttcgac gatctgctta ccgaaaaccc ggaaatgctg cgtcgtctgg
     1201 cgatcattaa aaattatgcc ggtacggacg cgactatctt aattaatggc gaaagcggga
     1261 cgggaaaaga ggtgctggcg caaagtattc ataatgccag ccaacgcgtc aacggcctgt
     1321 ttgtcgccat taactgcggc gcgatggcca ctcagattct ggagagcgaa ctctttggct
     1381 atgtcgccgg cgcatttacc ggcgcgtcgc cgaaaggcaa aataggcctg tttgaattag
     1441 cgcaccacgg taccattttt ctggatgaga ttagcgaact ggataaaccg ctacagacgc
     1501 gcttattacg ggtattgcag gagcggcaga ttatgcggct gggctcagac cagatgatac
     1561 ctgttgatat tcgcgtgatt gcggcgacca atcagacgtt aacgaagctc attgcggatg
     1621 ggacatttcg cgaagatctt tattatcggc ttaacgtatt aaaagtaacc actatcccgc
     1681 tacgcaaacg tccggaggat atcaaagcca tcggcctgtc gctgcttact agtttcagcc
     1741 agcattataa acgcccggca ctaacgttaa ccccggcgct gtggcaggag cttcagcgct
     1801 tcgcctggcc cggaaacgtc aggcagttaa gcaatattat cgaacggctg gtgctctcta
     1861 ttgatcactc cccggcaact ctggatgagg gccgcctctt gctggacgat ttggaagagg
     1921 ggagccgacg cgagccaagt acctgccacg actgccagat gctggctggc gattataaaa
     1981 cgattcgcct gcgtattttg agaaaattat tagaggcgga aagggataat aaatcgttag
     2041 tggcgaaacg gttaaatgtc gatcgtacct cgctgacgcg ctggatacgc gagtcggcct
     2101 gacaagaatt tacagactct gtgggcagcc ttgcaaagcg taacgcaaat aacgtctatt
     2161 attataggca gttaacgatc caagaggtga agtgatgaac aaggttgctc aatattatcg
     2221 tgaactggtg gcctcattaa gcgagcgttt acgcaatggc gagcgcgaca ttgatgcgct
     2281 ggtggagcag gcgcgccagc gcgtgatgca aacaggggag ttaacgcgaa ccgaggtgga
     2341 cgaactgacg cgcgctgtca gacgcgatct ggaagagttc gccatgagct acgaagagag
     2401 ccaggaagat agcgtcttct tgcgggtgat taaagagagt ctctggcagg aactggcgga
     2461 tattaccgac aaaacccagc tggaatggcg tgaagtcttc caggatttga atcaccacgg
     2521 cgtgtatcac agtggcgaag tggtggggtt ggggaatctg gtgtgcgaga aatgccacta
     2581 tcatctggcg gtttacacgc cggatgtgct gccgctctgc ccgaagtgtg ggcacgatca
     2641 gttccagcgc aggccgtttg agccgtaagg ttcattatcg tgagcggacg gttgccgtcc
     2701 gccatgttaa gagtgtagtt gggcttccag ccggtaatag ccatcggcaa agagtgaaaa
     2761 cagcggcgtc agggcggtaa atgcttcgtt caacccgact cctggctgat tccactcggc
     2821 aagtgaggat aaaaactgcg cggcgccttc atcatcattg ctaaaaccgg cataaacaaa
     2881 ttctgcgcag gttgggcacc aggcttcagt gtaaaaacga atcagcggcg agccatgcca
     2941 ggagagcata tgaataccgg cgtcagagtc gggatcgtgg ataatgcagg gacgaagcaa
     3001 tgcttttccg ttacgtactg aaaacgttat atgggctacg tcgtgctgta gcaggctgat
     3061 ttcaggtcta ttgttacgcc aaaacatcgc tgttcatccc tggattcttc tttgcgcttt
     3121 atgcgtagta ttgcagccgt tccgccagca aatcgacaaa tccctgacgg tctacatcga
     3181 ccatcaccgt cgcattcggc ttattccccg tcaggaaata ataatccacc accgtcatcc
     3241 cctgggtata tttcccctga gtttccacgc caacccaacg ctcaacggtg gtgaaaatct
     3301 caggtttcag cagccaggcg atagtgcaag ggtcgtgcag cggcgcgccg acaaatcccc
     3361 atttttcgtc tttgtggtat tcaaagaaga agtcgagtag ttcagccacg atcgtcgaaa
     3421 ttggattgcc gatgtcgcgg aaacgctcga tatcggcggc gtgaatctgc gccttatggg
     3481 tgacgtccag cccggccatc accaccggaa tgcctgactg gaagacaatt tctgccgctt
     3541 ccggatcgac gtaaatatta aattccgcag cgggcgtcca gttacccagc gccatcgcgc
     3601 cgcccatgat cacaatgcgg gcgattttcg tatgcagttc cggatggcta ttcagcagca
     3661 gcgccacgtt ggtctgtggg ccagtggaga cgatggtgac cggctgtgcg ctctcgcgca
     3721 gtgtttttgc catcagctca acggcagtgc cgctttgcgg ggcgaatgac ggctcgggca
     3781 gcgccgggcc gtcaagaccg ctttcgccgt gaacgttatc agcgataatc agttcgcgca
     3841 tgagcggttt caccgcgccg cccgccacag gaatatccgg gcgtttgagc agtgtcagca
     3901 tccgcagcac gttgcgcagc gtcttctccg gcgtctggtt gccggcggaa gaggtgatcg
     3961 ctttcacttc cagttcaggg gaggcgaggg cgagaacgag ggcgatcgcg tcatcatgac
     4021 ccggatcgca atcaataata atgggcagtg ccattgtggc tccttgtaag cggtactttg
     4081 tgacaaggtt aacgcccggc tggatacgtt tcgagaagcg aagaagtaaa gcgtgaggta
     4141 gcgcgcactc tgacgtgcgc gccgggaaga ttagtgcagg attttcgcaa ggaagtcctt
     4201 tgcgcgatcg gaactggggt tagcgaagaa ctcctctttt ggcgaatctt cgacgatttt
     4261 accttcatcc ataaagatca cccggttagc cactttacgg gcaaagccca tttcgtgcgt
     4321 caccaccatc atggtcatcc cttcgttcgc cagctcgacc atcacgtcca gtacctcgtt
     4381 gatcatttcc ggatcgagcg cggaagtcgg ttcatcgaat aacatggcaa tggggtccat
     4441 acatagcgcg cgggcgatcg ccacgcgctg ctgctgaccg ccggaaagct gcgccgggaa
     4501 cttgttggca tgcgcagaca ggccaacgcg ctccagcagc ttcaggcctt tatcgcgggc
     4561 ggcggcctta tcgcgtttca gcactttcac ctgcgccagc gtcaggtttt cgatgatcga
     4621 caggtgggga aacagctcga agtgctggaa taccatgccc acgcgggaac gcagtttcgc
     4681 cagatcggtt tttttgtcgt tcacaataat gccgttaacg gtaatttcgc ctttttgcac
     4741 cggttccaga ccgttgacgg tcttaattag cgtggattta ccggaacccg atggcccgca
     4801 gactaccacc acctcacctt ttttcacttc tgtcgaacaa tcggtcagca cctgaaagtg
     4861 accataccat tttgaaacat ttttcagggt aatcattaaa ctgtcctttt cttcaaatag
     4921 ctgaccagca acgacgcgct caggctgata acaaaataaa cggcgccggc gaacagaatc
     4981 atttcgacct gagtaccgtc acgctcgccg atagtcgacg cggtgcggaa gaagtccgcc
     5041 aggctgagta cataaactaa agaggtgtcc tgaaatagca cgatgccctg cgtaagcaac
     5101 agcggcacca ttgcccgaaa cgcctgcggc agaataatga gcttcatcga ctgccagtgg
     5161 gtcatcccca gcgccagcgc ggcgctggac tgcccgcggg aaatgctttg aataccggcg
     5221 cgaataatct cggaatagta ggccgcttca aacatggaga atgccaccat cgcggagatc
     5281 aggcggatat cggttttcgg cgatagtccc agcacgtttt gcagaaagcc gggtacaatc
     5341 agatagaacc acagcaagac catgaccaac gggatggaac ggaaaacgtt aacatacgct
     5401 ttagcaaacc aggcgatagg agcaaagctt gagaggcgca tgacggccag aatggttccc
     5461 cagactatcc ccacgacaac ggcggtgacg gtgatcttca gcgtgatgac caacccggcc
     5521 agcaggtaag gcagtgaggg gataatcgaa ctccagtcaa attcgtacat tatttgctcc
     5581 ccacgttgcc cggcaggcgg actttgcgtt caaccaggct cataaccagc atgataacgg
     5641 cgttaatcag cacataggcc agcgtaatgg cggtgaagga ttcccaggcg tgcgccgagt
     5701 aatccaacag tttgcctgcc tgcgccgcca tatccaccag gccgatggtt gatgcaatag
     5761 ccgagttttt caccaggttc atcatctctg acgtcattgg cggcacgata acgcgatagg
     5821 cattcggcag caggacatag cgataagcct gcggcagcgt tagccccatc gccagcgccg
     5881 cgttcttctg tccgcgaggc agagactgaa tcgcggcgcg cacctgttcg caaacacggg
     5941 cggcggtaaa cagtcccaga cagatcattg aggagaggaa aaactgaata ttgggatcga
     6001 gttccgcctt aaaccacatg ccaagatctt ccggcaacag ttcaggcacc accaggtacc
     6061 aggtgaagaa ttgcacgatc agcggcacgt tgcggaacag ttctacgtac aatgtgccca
     6121 gtccggagag gaaacggttg ggaacggtac gtaaaatgcc gaaaatagat cctaccagga
     6181 aagcgataat ccaggcggta atcgaaaggg ctacggtgac ctgaaaacca ctccatagcc
     6241 agccgagata ggtggtattg ccgaaggggg cttcctgtaa aaaaataccc cagttccagt
     6301 ctattgacat acatctactc cgaaaaaaaa gggtagcagc gctaccctcg aagattgttg
     6361 cccggcgatc tgcggtttca ggcccgatgg ggaacgacca tcaggcttat agtctgtccg
     6421 tgctgagcga caatcgagag gacaggagtc ccgtcccatt tagttttagt tagttaagcg
     6481 ctttatcatt cggtgctttg aacagggctt tcatctcgtc agacaactcg aaattcatgt
     6541 tcaggttttt cggtgggatc ggatttttaa accacttatc aaaccacttt tccgcttcgc
     6601 cggaggtttg cgcctgagcg atggtatcgt ccatcagctt tttaaactca gggtcgtttt
     6661 tacgcagcat acagccgtag gcttcctggg actgcggttt accgacaatc tcccagttat
     6721 ccggtttctt ggctttggcg cgctcgccgg ccagcagcgc gtcatccatc ataaaggcga
     6781 cggcgcgacc gctttccagg gtgcggaacg agtcaccgtg gtctttcgcg ctaataatac
     6841 gcatccccat cttttgctct tcgttaagct tatgcagcag aatttcagag gtcgtcccgg
     6901 aggtgacgac gaccgctttg cctttcagat ccgggaaatc tttaatatcg ccgccttttt
     6961 tagtcagcag tcgcgtcccg acgacgaaaa tcgtatcgga gaaggcggcc tgtttctggc
     7021 gctcaaggtt gttagtcgtt gaaccacatt caaaatcgaa ggttccgttt tgcaacagcg
     7081 gaatacggtt ttgcgaggtg atcgggatca gcttcacctg cagatcgggc ttgttaagtt
     7141 tcttttttac cacttccaca atggcgttgg agtagtcctg ggaatagccg accactttct
     7201 gctggttgtc gtaataagaa aagggcacag aagattcgcg atgcccgacg acgatcacgc
     7261 catttttagc gatcttgtcc agggtgctac cagcggcagg cgcgccatct tctgcgtgcg
     7321 caaggcccgc agacagtccc atgaccagca ttgctgtggt tagcttacgt aattgcatat
     7381 ccaactcctt tatcatctgc gccgtcgacg cattgatagc tattgtgatg ttgttattgc
     7441 ctgcaacttg cgcgtgcagt gttatgtgtg tttgttaaca tttagtgtgg cttgttgtaa
     7501 atattttgct gcgatattgt ttatttttgc gaagtgcgcc gcaccgttca gaggcaaaaa
     7561 tcgcagtttg cacaataatg gtgctaccga tgctgtgttg tggtgcaacc tggttgcgcc
     7621 ggtagggagt gtgcagcctc ttgattatat taagcaattg gcgtgccaga atgagatttt
     7681 ggtggcggtg agaggttgta ggcctgataa gcgtagcgcc atcaggcacg gtgcgataca
     7741 actgccggat ggcggcgtaa cgccttatcc ggcctacatt ggatagtgca atgttttatt
     7801 tgcggcgttg acgcaggctc atcaccagcg cgccaaagcc gaacagtacg gtaatcaacc
     7861 acaccgtcca gtcgccggtt cgtgcgtacg gcgtcaggcc ggtggtcggc gtgactttgg
     7921 tagttagcac ctggcgtgtg aactgcggga tcatcgcctg aatttcgccc tgcgggccaa
     7981 tcaccgccgt aataccgtta ttagtactgc gcagcaacgg acgcgccagc tccagcgaac
     8041 gcatccgcgc catctggaaa tgttgccacg ggccaatgga cttaccaaac caggcgtcgt
     8101 tagaaatcgt cagcagatag tcggtgtccg ggcggaagtt atcccgcacc tgttcgccaa
     8161 gaataatttc ataacagatt gccgccgtca gcttatagtc gtgcgcatgt aactgcggct
     8221 ggatataagg gccgcggcta aaggaggaca tgggcagatc gaagaacggc gccagcggac
     8281 gcaggataga ctccagcgga acgaactcgc caaagggtac aaggtgattt ttattgtagc
     8341 gattgggcga gtcataactg tatggattat ccttgcccaa cgtaataatc gtattgtagg
     8401 tgtcgtatcg attctgttta ttgagacgcg catcgacaat accggtgatc agcgtgctat
     8461 ttttttcgcg taacatctcg tccagcgaac gaaggaaagg ctgctgattg atttcgagat
     8521 ccggaatcgc cgactcaggc cagataataa tctgtgattt gcctaactct gggcgagttt
     8581 cgttgagata aatgtttagc gtattcagta gctggttttc gtcccacttc agcgactgcg
     8641 gaatatcgcc ctgcaccagc gatacctggg tcgctttggt aggttccagc gtaaaccact
     8701 ggatataacg tagcggaaag ggcaaagcaa acagaatcac ggcgacagcc agcggacgcc
     8761 agttccgcgt cgccagtgcc agcgctaaca ggccgctgac catcatcagc aggaagttga
     8821 tcgcttcgac gcccattacc ggcgccaggc cttttagcgg gccgtcgacc tgactatagc
     8881 caaattgcag ccaggggaag ccggtcagca cccagccgcg taaaaattcg gtgatttgcc
     8941 atattgcagg cgcggcgata gcgacgcgca gccagttggt ttttggccac aggcgcgaca
     9001 aaatcccggc aaacagtccg gtatacagcg agagataagc tgcaagcagc accaccagaa
     9061 aaacgttaac cgggcccggc atgccgccaa actgcgcgat actgacataa acccagttaa
     9121 tcccgctgcc gaaaagtccg agtccccagc aatagccgat ggcggcagac tggagcgggc
     9181 ggcgattaaa cgttaaggcc tgcagcccga taagcgacac tatcgctgcg ggccagacgt
     9241 catacggaga gaaagccagt gttccgcagg cgccgaataa taacgccagc agcaggcgaa
     9301 tacgctggcg ttcaattaac gaggcaaatg ccatttttag tccactattg ctgttattcg
     9361 tccagttttg gctggggcga gtcatccggg atcctgacat gcacctgaat aatacgacga
     9421 ctatcggcca ttgccacttt gaactggtaa ccatcaatgt caatggtttc gccgcgggcc
     9481 ggtaaatggc cgaacgcctg catcaccagc ccgccgatgg tatcgacttc ttcatcgctg
     9541 aagtgggtgc cgaaagcgtc attgaagtct tcaatcgacg ccagcgcgcg aatcgtccag
     9601 gtatggcggc taagctgacg gaagtcgata tcgtcttctt cgtcatactc atcttcaatt
     9661 tcaccgacaa tcagttcgag gatgtcttcg atagtcacaa ggccggaaac gccgccaaac
     9721 tcatcgataa cgatggccat atggtagcgc tgggagcgga attccttgag catacggtca
     9781 acccgtttgc tttccggtac gacaaccgcg gtacgtaaca ctttgtccat gctgaaggct
     9841 tcggcatcgc tgcgcataaa cggcagcaaa tctttggcca tcagaatccc ttcaatgtga
     9901 tctttatctt cgctgatcac cggaaaacgc gagtgggcgg actcgatgat aacatcgaga
     9961 cattcgtcca gcgtctggtt gcgtttcagg gtaatcatct gggagcgcgg gatcataata
    10021 tcgcgaacgc gctggtcggc gatgtccatt acgccttcga gcatatcgcg cgtatcttca
    10081 tcgataagct cgttctgccc ggaatcacgg atcagcgcca gcaactcatc acggttttta
    10141 ggttcaccgt ggaaaagctg gctgagtagc agggaaaaaa atcccttttt actgtttact
    10201 gtgtcactac tgtgtgaatt gtcgtcgctc atggcgtcgt atgggttctc atgttagtta
    10261 atacaaagct cgtcatgcgt atactcagct gtgacggcat gttttgcctg atgacgctac
    10321 gcttatcagg cctacaaaag gcatgaatgt aggccggata aggcgcaagc gccgccatcc
    10381 ggcaagctac tattctgcaa tcttctcggc aatgtacgga tcctcatagc ccatagcaag
    10441 cataatctcc gtttcgagag actccatctc ttccgcttcg tcatcgtcga tatgatcgta
    10501 acccagcaaa tgcaggctac cgtgtacgac catgtgcgcc cagtgcgcct ccagtggctt
    10561 gctctgttcc tgcgcttcct gctccacgac ctgacggcaa ataatcagat cgcccagtag
    10621 cggcatttca atgccggggg gcgcttcaaa cgggaaggag agaacattag tgggtttatc
    10681 tttcccgcgg tacgtcaaat taaggtcatg gctttcggcc tcatccacca gacggattgt
    10741 gacttccgcc tcttcctgaa actgcggaat aacgccgtcc agccagcgtt gaaactgagc
    10801 ttcatccggc aggcccgcgt ggttttcaca ggccaactgt aaatcgagga tcacctggct
    10861 catttctgtt cctgctcctg ggcttcacgc ttacgctccg ccgccaacgc cgctttgcgt
    10921 ttttgttcgg cctcttccca ggcttcatag gcgttcacaa tgcgggcaac gaccggatgg
    10981 cgcaccacgt cttcgctgtg gaagaagtta aagctgattt catcgacttc cgccagcact
    11041 tcaatggcat gacgcaagcc ggatttggtg ttgcgtggca ggtcaatctg cgtcacgtcg
    11101 ccggtgatca ccgctttcga gttaaagccg atacgcgtca ggaacatctt catctgttcg
    11161 atagtggtgt tctggctttc atccagaatg ataaaggcgt cgtttaatgt gcgtccgcgc
    11221 atataggcca gcggcgcgac ttcaatcaca ttgcgctcaa tcagcttctc gactttttca
    11281 aagccgagca tttcgaacag cgcgtcatac agcggacgca ggtacgggtc caccttctga
    11341 cttaaatcgc ctggcagaaa gccgagtttt tcgcccgctt ccaccgccgg acgggtcagt
    11401 agaatacggc gaatctcctg gcgctccagg gcgtctaccg cagcggcgac cgcaagataa
    11461 gttttaccgg tacccgccgg gccgacgcca aaggtaatat catgatcgag aatattggcg
    11521 atgtactgcg cctggttcgg ggtacgcggt ttaatcacgc cgcgcttggt tttgatatta
    11581 atagctttgc catagtcagg cacgctttcc gcgctctgtt ccagcacccg cgcttctttg
    11641 atcgccagat gaatttgttc cggttcgata tcctgagtct ggccgcgcat cggtgcggta
    11701 tcgacataca gacttcgcaa aatatctgtc gccgcggtca cgcaaatcgg acgaccggtc
    11761 agtttaaagt gattgtcacg gcggttgatt tcaataccga gacgacgttc gagctgttta
    11821 atattgtcat caaacggccc gcaaaggctc aacagacggg cgttgtctgc gggctcaagg
    11881 gtaatttcgc gagtgtctat attcaaactg ttcctcttgt gtctgtatcg ccggacgctg
    11941 aacatttacc ggcatctaag gaaattattc acgccatagg gaaaaggcgc aagcattgca
    12001 atgaagatgg ggatgaagag agaaaattgc aaggcccgtc gggcgacagg ccatgaccag
    12061 gaagcccgac aggcgtagcg ccatcgggca ttattgcctt tcctgcagga ttaaggctgg
    12121 tagaatccta cgcccagctc attttcttta cgggtacggg caatgacgga ctccggcgtt
    12181 tcggcgacgc gcagacccat ttcatcttcg gtacgcacca cttttccgcg cagggagttc
    12241 ggatagacgt cagtaatttc cacatcgaca aacttaccaa tcatctccgg cgtgccttca
    12301 aagttcacca cccgattgtt ttcggtacgg ccagacagtt ccataatgtt tttacgcgac
    12361 gtgccttcca ccagaatgcg ctgtgtcgtg ccgagcatac ggcggctcca tgccatcgcc
    12421 tgctgattga tacgctcttg cagaatatac agacgctgct ttttctcttc ttccggtacg
    12481 tcatcaacca tatcggcagc cggcgttccc ggacgcgcag agaagataaa gctgtagctc
    12541 atatcaaagt tgacgtcggc gataagcttc atggtttttt cgaaatcatc ggtagtttcg
    12601 cctgggaaac cgacgataaa gtcagagctt atctgaatgt ccggccgcgc cgcgcgcagt
    12661 ttacggatga ttgctttata ttccagcgca gtgtgggtgc gccccatcag attcaacacg
    12721 cgatcggaac cgctctgtac cggcagatgc aggaaactga ccagctccgg cgtatcgcgg
    12781 tacacctcga taatatcgtc ggtgaactca atcggatggc tggtggtaaa gcgaatacgg
    12841 tcaatgccgt cgatggcggc aaccagacgc agcagatcgg caaaggtgcc ggtggtgccg
    12901 tcgtagtttt ctccgcgcca ggcgttaacg ttctggccca gcaggttgac ctcacgcacg
    12961 ccctgcgccg ctaactgggc gatttcgaac aggatatcgt ctgagggacg gctgacttct
    13021 tcaccgcggg tatacggtac cacgcagtaa gtacaatatt tattgcagcc ttccatgata
    13081 gaaacgaaag cggtcgggcc ttcggcgcgc ggctccggca aacgatcgaa cttctcgatt
    13141 tccgggaagc tgatatcgac caccgggctg cggtcgccac gcacggagtt aatcatctcc
    13201 ggcaggcggt gtaaggtttg cgggccaaaa ataatgtcga cgtaatgggc gcgttgacga
    13261 atgtgctcgc cttcctggga agccacacag ccgccgacgc cgataatcag atcgggattt
    13321 ttctctttta acagtctcca gcgacctaat tgatggaaga ctttttcctg agccttctcg
    13381 cggattgagc aggtattcaa cagcagcaca tccgcctctt ccgccacgtc ggtcagttga
    13441 tagccgtggg tggcgtccag cagatcggcc atcttcgatg aatcgtactc gttcatctga
    13501 cagccccagg ttttaatatg gagtttttta gtcatcgact tgctcttgcg aaatagtggc
    13561 tgaaaagcag ggcgcatagt gtaatgcttt ggcgcggttg tgaccagtat gactgacgtc
    13621 agccctaatg ggtaaaaaat cctgtaaact tgtctaaaac gtaacaggat gaatgaccat
    13681 gacaaatcaa ccaacggaaa ttgccattgt cggcggggga atggtcggcg gcgcgctggc
    13741 gctgggtctg gcgcagcaag ggtttacggt gatggtaata gaacatgccg cgcctgcgcc
    13801 gtttgtggct gacagccagc ctgacgtgcg gatttcggcc attagcgcgg catccgtggc
    13861 gctgctcaag gggctgggcg tttgggaggc ggtgcagggg atgcgtagcc atccttatcg
    13921 gcgactggag acctgggagt gggaaaacgc ccatgtggtg ttcgacgccg ct
//
LOCUS       DAGWFR010000107        13881 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.109, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000107 DAGWFR010000000
VERSION     DAGWFR010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 13881)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13881)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13881
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.109"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(52..1395)
                     /locus_tag="MOX77_003107"
     CDS             complement(52..1395)
                     /locus_tag="MOX77_003107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HCA3358566.1"
                     /translation="MLNSIFIIFCLIAVSAFFSISEISLAASRKIKLKLLADEGSINA
                     QRVLKMQENPGMFFTVVQIGLNAVAILGGIVGDAAFSPAFSALFSHYMSPELSEQLSF
                     ILSFSLVTGLFILFADLTPKRIGMIAPEAVALRIINPMRFCLFVFRPLVWLFNGMANN
                     IFRLFKIPMVRKDDITSDDIYAVVEAGALAGVLRKQEHELIENVFELESRTVPSSMTS
                     RESIIWFDLHEDEQSLKKKVAEHPHSKFLVCNEDIDHIIGYVDSKDLLNRVLANQSMA
                     LNSGVQIRNTLIVPDTLTLSEALESFKTAGEDFAVIMNEYALVVGIITLNDVMTTLMG
                     DLVGQGLEEQIVARDENSWLVDGGTPIDDVMRVLDIDEFPQSGNYETIGGFMMFMLRK
                     IPKRTDSVKFSGYKFEVVDIDNYRIDQLLVTRLDNKSNVPAPKLPDAQGKEDSAA"
     gene            complement(1585..2223)
                     /gene="msrA"
                     /locus_tag="MOX77_003108"
     CDS             complement(1585..2223)
                     /gene="msrA"
                     /locus_tag="MOX77_003108"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HCA3358567.1"
                     /translation="MSLFDKKHLVTQADALPGRNTPMPIATLHAVNEHSMTNVPAGME
                     IAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYD
                     PAVIRYEQLLQTFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASRERFQSA
                     MAAAGDHRPITTEIAHATPFYYAEDEHQQYLHKNPYGYCGIGGIGVCLPPDA"
     gene            2436..4169
                     /gene="tamA"
                     /locus_tag="MOX77_003109"
     CDS             2436..4169
                     /gene="tamA"
                     /locus_tag="MOX77_003109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter assembly complex protein TamA"
                     /protein_id="HCA3358568.1"
                     /translation="MPHIRQLCWVSLLCLSSSAVAANVRLKVEGLSGELEKNVRAQLS
                     TIQSDEVTPDRRFRARVDDAIREGLKALGYYEPTIKFDLLPPPAKGRQVLIARVTPGQ
                     PVLIGGTEVILRGGARTDKDYLALLKTRPAIGTVLNQGDYDNFKKSLTSVSLRKGYFD
                     SEFIKSQLGIALGRHQAFWDIDYDSGERYRFGPVTFEGSQIRDEYLQNLLPFKEGDEY
                     ESKDLAELNRRLSATGWFNSVVVAPEFEKSRKTKILPLKGVVSPRTENTIETGVGYST
                     DVGPRVKASWKKPWMNSYGHSLTTSTSISAPEQVLDFSYKMPLLKNPLEQYYLVQGGF
                     KRTDLNDTEQDSTTLAVSRYWDLSSGWQRAINLRWSFDHFTQGNVTNTTMLFYPGVMI
                     SRTRSRGGLMPTWGDSQRYSVDYSNTAWGSDVDFSVLQAQNVWIRTLYDRHRFVMRAN
                     LGWIETGDFDKVPPDLRFFAGGDRSIRGYKYKSISPKDSDGNLKGASKLATGSLEYQY
                     NVTGKWWGAVFVDSGEAVSDIRRSDFKTGTGVGVRWASPVGPVKLDFAVPVGDKDEHG
                     LQFYIGLGPEL"
     gene            4166..7945
                     /gene="tamB"
                     /locus_tag="MOX77_003110"
     CDS             4166..7945
                     /gene="tamB"
                     /locus_tag="MOX77_003110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter assembly complex protein TamB"
                     /protein_id="HCA3358569.1"
                     /translation="MSLWKKISLGVLIFIVVLLASVAFLVGTTTGLHLVFGAANRWVP
                     GLDIGQVTGGWRDLSLKNIRYEQPGVAVNAGEIHLAVGLDCLWRSSLCVNDLALKDIN
                     VAIDSKKMPPSEPAQEEEESGPLNLSTPWPITLSRVALNNINIKIDDTTVSVLDFTYG
                     LAWQEKNLTLKPTRLQGLLIALPKVAEVAQEEVVEPKIEKPQPDEKPLGETLKDLFAK
                     PVMPEMTDVHLPLNLNIESFRGEQLRITGDTDLTVRTMLLKVSSIDGNMKLDTLDIDA
                     NQGTVKASGTAQLANNWPVDITLNSTLNIDPLKGEKIKLKVGGALREQLEVRVNLSGP
                     MDVALRAQTRLAEAGLPLNLEVVSQRIAWPLTGDTQFQADDLKLKLSGKMTDYTLSMR
                     TAVKGQDIPPATITLDAKGNERQINLDKLTVAALEGKTELKALVDWQQAISWRGELTL
                     NGINTAKEIPDWPAKLNGVMKTKGSLYGGTWQMDVPELKLTGNVKQNSVNVNGTLKGN
                     SYMQWTIPGLHLALGPNSADIKGELGVKELNLDAAIDAPGLDNALPGLGGMAKGIVKV
                     RGTVEAPQLLADITAHGLRWQELSIAQARIEGDIKSTDQIAGHLNVRVERISQPDVNI
                     NLVTLDAKGSEKQHQLQLRVQGEPVSGQLSLTGSFDREEARWKGTLSDTRFQTPVGPW
                     SLTRAIALDYRNKEQEISIGPHCWLNPNAELCIPQTIDAGAAGRALVNLNRFDLAMLK
                     PFMPDTTQASGVFSGKADVSWDTTQEGLPQGKVTLSGRNVKVTQTVNDAPLPVAFETL
                     NLSADLHNNRAELGWLIRLTNNGQFDGQVQVTDPQGRRNLGGNVNMRNLNLAMVNPVF
                     LRGEKAAGMLNARLRLGGDVQSPQLFGQLQLSALDIDGNFMPFEMQPSQLAMNFSGTR
                     STLAGIVRTQQGQINLNGNADWSQIDNWRARVTAKGSRVRITVPPMVRLDVSPDVVFD
                     ATPSLFTLDGRVDVPWARIVVHDLPESAVGVSSDVVMLNNDLQPETPQTASIPINSNL
                     TVHVGNNVRIDAFGLKARLTGDLKVAQDKQGLGLNGQINIPDGRFRAYGQDLLVRKGE
                     LLFSGPPDQPLLNIEAIRNPDATEDDVIAGVRVTGTADEPKAEIFSDPAMPQAEALSY
                     LLRGQGLDSNQSDSAAMTSMLIGLGVAQSGQVVGKIGETFGVSNLALDTQGVGDSSQV
                     VVSGYVLPGLQVKYGVGIFDSLATLTLRYRLMPKLYLEAVSGVDQALDLLYQFEF"
     gene            7948..8292
                     /locus_tag="MOX77_003111"
     CDS             7948..8292
                     /locus_tag="MOX77_003111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamylcyclotransferase"
                     /protein_id="HCA3358570.1"
                     /translation="MRIFVYGSLRQKQGNSHWMTNAQLLGDYRIDNYQLYSLGHYPGA
                     VPGNGAVYGEVYRIDNATLAELDALRTRGGEYARQLIQTPYGSAWMYVYQRPVDGLTL
                     IESGDWLDRNQP"
     gene            complement(8346..9554)
                     /locus_tag="MOX77_003112"
     CDS             complement(8346..9554)
                     /locus_tag="MOX77_003112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3358571.1"
                     /translation="MTSMQKWLRIGATLMFGLFVAYLDRSNLSVTLPTITHDLNIDGA
                     TASIVLTIFLIGYAFSNIFGGVFTQRYDPKKIVILMVLIWSIATVFVGFTSSVYVILI
                     CRLVLGITEGIYWPQQSRFASDWFSDKERTQANSIIQYYGQFLALGLGFMILSPLDAA
                     FGWRNVFIITGMIGIVVVVPLYITMLKKQEEAPYYRAPAPTEKTKLTLESLGGTPFLL
                     LIFTYITQGMLFWGITLWIPMVVNSLGYTGFSKALVSSLPYLTAVILAIPISWISDKT
                     QKRVLIASLGLLIPGVMLFLLPFVDAPGFKITLITLAMGYYAASFTPNIWSIIQSNVK
                     PHAIGPASGIINGIGAGGGGTLAGLMVGYFYRTTGSYMQGFMVLGCIVILGGASLLIY
                     GRIRAHHARR"
     gene            complement(9551..10714)
                     /locus_tag="MOX77_003113"
     CDS             complement(9551..10714)
                     /locus_tag="MOX77_003113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallo-dependent hydrolase"
                     /protein_id="HCA3358572.1"
                     /translation="MMKNDILITGGHIIDPARNINEINKLRIINDIIVDADKYPVTSE
                     TRIIHADGMIVTPGLIDYHTHVFYDATEGGVRPDMYMPPNGVTTVVDAGSAGTANFDA
                     FYRTVICASKVRIKAFLTVSPPGQIWSQENYDPDNIDENKIHALFRQYRNVLQGLKLK
                     VQTEDIAEYGLKPLTESLRIANDLRCPVAIHSTHPVVPMKELVSLLRRGDIIAHAFHG
                     KGSTILTNEGAVLAEVRHARERGVIFDAANGRSHFSMNTARRAIANGFLPDIISSDLS
                     TITKLAWPVYALPWILSKYLALGVTLADVINACTHTPAVLMGMAAEIGTLAPGAFADI
                     AIFKLKNRHVEFADIHGETLTGTHVLVPQMTIKSGEILFRQIDFGTRPNGVEK"
     gene            complement(11124..11654)
                     /gene="ppa"
                     /locus_tag="MOX77_003114"
     CDS             complement(11124..11654)
                     /gene="ppa"
                     /locus_tag="MOX77_003114"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001739810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HCA3358573.1"
                     /translation="MSLLNVPAGKELPEDIYVVIEIPANADPIKYEVDKESGALFVDR
                     FMSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQPGAVIRCRPVGVLKMTDESGE
                     DAKLVAVPHTKLSKEYDHIKDVNDLPELLKAQITHFFEHYKDLEKGKWVKVDGWDNAE
                     AAKAEIVASFERAAKK"
     gene            complement(11881..12879)
                     /gene="fbp"
                     /locus_tag="MOX77_003115"
     CDS             complement(11881..12879)
                     /gene="fbp"
                     /locus_tag="MOX77_003115"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016233757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HCA3358574.1"
                     /translation="MKTLGEFIVEKQHEFSQATGELTALLSAIKLGAKIIHRDINKAG
                     LVDILGASCAENVQGEVQQKLDLFANEKLKAALKARDIVAGIASEEEDEIVVFEGCEH
                     AKYVVLMDPLDGSSNIDVNVSVGTIFSIYRRVTPVGTPVTEEDFLQPGNKQVAAGYVV
                     YGSSTMLIYTTGCGVHAFTYDPSLGVFCLCQERMRFPEKGKTYSINEGNYIKFPNGVK
                     KYIKFCQEEDSSTSRPYTSRYIGSLVADFHRNLLKGGIYLYPSTASHPQGKLRLLYEC
                     NPMAFLAEQAGGKASDGKERILDIIPESLHQRRSFFVGNRHMVDDVERFIREYPDA"
     gene            13054..>13881
                     /gene="mpl"
                     /locus_tag="MOX77_003116"
     CDS             13054..>13881
                     /gene="mpl"
                     /locus_tag="MOX77_003116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-
                     meso-diaminopimelate ligase"
                     /protein_id="HCA3358575.1"
                     /translation="MRIHILGICGTFMGGLAMLARSLGHEVTGSDANVYPPMSTLLEK
                     QGIDLIQGYDASQLDPQPDLVIIGNAMTRGNPCVEAVLEKNIPFMSGPQWLHDFVLRD
                     RWVLAVAGTHGKTTTAGMATWILEACGYKPGFVIGGVPGNFEVSARLGESPFFVIEAD
                     EYDCAFFDKRSKFVHYCPRTLILNNLEFDHADIFDDLKAIQKQFHHLVRIVPGQGRII
                     WPENDINLKQTMALGCWSEQELVGEQGHWQAKKLTTDTSEWEVWLDGEKVGDVKWGLV
                     "
BASE COUNT         3424 a         3398 c         3815 g         3244 t
ORIGIN      
        1 aaaaaaacgg ctcctgaatc aggagccgtt gatgtttctg gcaaacggat ttcaggccgc
       61 gctgtcttct ttaccttgcg catcgggcag tttcggcgcc ggtacgttgc ttttattgtc
      121 gagacgcgtc accagcaact gatcgatacg gtagttgtcg atatccacca cttcaaattt
      181 gtagccggaa aacttcaccg aatcagtacg ttttgggatc ttgcgcagca taaacatcat
      241 aaagccgcca atggtttcat agttgccgga ttgcggaaac tcatcgatat ccagcacgcg
      301 catgacgtcg tcaatcggcg tgccgccgtc aaccagccag gaattttcat cgcgcgccac
      361 aatttgctct tccagtccct ggccgaccag gtcacccatt agcgtggtca tcacatcgtt
      421 cagcgtaatg ataccgacga ccagcgcgta ttcattcata atgaccgcga aatcttcgcc
      481 cgccgttttg aaactttcca gcgcctcaga aagggtcagc gtatccggca caatcaaggt
      541 attgcgaatt tgcacgccgc tattcagcgc catactttgg ttcgccagca cgcggttcag
      601 cagatctttg gaatctacat agccgatgat gtggtcgata tcttcattac acaccaaaaa
      661 ttttgagtgc ggatgttcgg ctaccttttt cttcaggctt tgttcgtctt cgtgtagatc
      721 aaaccagatg atactttcgc gcgacgtcat agaagacggt acggtgcggg attcaagttc
      781 aaacacattt tcaatcagtt cgtgctcttg cttgcgcaag acgcccgcca gcgcgccggc
      841 ttccaccacc gcgtaaatat catcagaagt aatgtcgtct ttccgcacca ttggaatttt
      901 gaacaggcgg aagatgttgt ttgccatgcc gttaaacagc cacaccagcg ggcgaaaaac
      961 gaacaggcag aagcgcatcg ggttgatgat acgcaaagcc acagcttctg gcgcaatcat
     1021 accgatgcgt ttcggggtta aatccgcgaa caggataaac agccccgtca ccagcgagaa
     1081 agagagaata aagctcaact gctcggagag ttctggcgac atatagtgcg agaaaagggc
     1141 ggaaaaggcg ggcgaaaatg ccgcatcgcc gacgataccg ccaagaatag cgacggcgtt
     1201 caggccaatt tgcacaacgg tgaaaaacat gccgggattt tcctgcattt tcaatacgcg
     1261 ttgtgcgttg atactgcctt catcagctaa taacttaagt ttaatcttac gtgatgcggc
     1321 aagcgagatc tcggagatgg agaagaacgc acttacagcg atcaggcaga atataatgaa
     1381 tatactgttt aacatatctt atccggcgaa acgccagatc ctcggaaggg aagtttataa
     1441 atccgtgtgg taacgtttaa tgaaaaccgg ctcgtagcag tgagccgata agttcagggc
     1501 tagtatagcg taagctactg taaagtcgcc agagggttca ttttcaactc cgacaagttc
     1561 cccctacgcc tgcgtcgtca cgcgtcacgc gtcaggcggc aggcaaacgc cgatcccgcc
     1621 aatcccgcag taaccgtatg gatttttgtg cagatactgt tggtgttcat cctcggcgta
     1681 gtaaaacggc gtcgcatggg cgatttccgt ggtaataggg cgatggtctc cggcggcggc
     1741 cattgccgac tgaaagcgct cgcgactggc gtgagcggcg gcattctgtt ccggcgttaa
     1801 gggataaatc gcagaacggt attgcgtacc gtgatcgtta ccctgttgca tcccctgcgt
     1861 cggatcgtga ttttcccaga aggtctgtaa aagctgctca taacggataa cggcaggatc
     1921 gtacactatc cgtaccgctt cggcatgacc ggtctgcccg gagcagactt cccggtaggt
     1981 tggattaggc gtgtaaccgc ccgcataccc tgctgcggtg ctatatacgc cgggcaattg
     2041 ccagaataaa cgttctacgc cccagaaaca gcccatcgcg aagtaggcga tctccatccc
     2101 ggcagggaca ttggtcatag agtgttcatt taccgcatgc agagtggcga ttggcatcgg
     2161 ggtgttgcgt cctggtaacg catctgcttg agtaaccaga tgttttttat caaataaact
     2221 catgaactat tctcccgaaa gcgttaattg gcgttaaggt tgtaacgaga cgcatctttg
     2281 cacacaataa caacattaat gtatctggat ttaaccataa gaaatatttg ggcagtcgtc
     2341 tgcttttcaa tcgaaattgt tgattttatg ttaagccgcg gagcggtagt gtgatttttt
     2401 ccaggggtgg gaatagggga tattcaggag aaaatgtgcc acatatccgt cagttatgtt
     2461 gggttagctt actgtgcctg agcagttctg cggtagccgc aaatgttcgt ctgaaagtcg
     2521 aagggctatc cggagagctg gaaaaaaacg ttcgcgcaca gctctctacg attcagagcg
     2581 atgaggtgac gccggatcgg cgctttcgcg cccgagttga tgatgcgatt cgcgaagggc
     2641 ttaaagcgtt aggctattac gaacccacta tcaaattcga cttgcttcca ccgcctgcga
     2701 aaggacggca ggtattaatc gccagggtta cgcccggcca gccggtgttg attggcggta
     2761 cagaagtcat tttacgcggc ggcgcgcgta cggacaaaga ttatctggcc ttactgaaaa
     2821 cgcgtccggc aatcggcacg gtgctcaacc agggggacta tgacaatttt aaaaagtcgt
     2881 taaccagcgt gtcgctacgc aaaggctatt tcgacagcga attcattaaa agtcagttgg
     2941 gaattgctct gggccgtcat caggcgtttt gggatattga ttatgatagc ggtgagcgct
     3001 atcgcttcgg gcctgtcacc ttcgaaggtt cgcagattcg tgatgaatat ttacaaaatc
     3061 tgttgccgtt taaagagggt gatgagtacg aatcgaaaga tttggcggaa ctaaaccgcc
     3121 ggctttccgc taccggatgg tttaattctg ttgtggtggc gccggaattt gagaaatcgc
     3181 gtaaaacaaa aattctgccg ttaaaaggcg tggtatcacc gcgaaccgaa aacacgattg
     3241 aaaccggggt ggggtactcc accgacgtcg ggccgcgcgt gaaagcgtcg tggaaaaaac
     3301 cgtggatgaa ctcctacggt catagcctga ccaccagcac cagtatttct gcgccggaac
     3361 aggtgctgga ttttagttat aaaatgccgc tgctgaaaaa cccgctggag caatactatc
     3421 tggtacaggg cggttttaaa cgtaccgatt tgaatgatac ggagcaggac tcgaccacgc
     3481 ttgccgtgtc gcgttactgg gacctttcca gcggttggca gcgggcgatt aacctgcgct
     3541 ggagtttcga ccactttacc caggggaacg tcaccaatac caccatgctg ttctacccgg
     3601 gcgtgatgat cagccgaacc cgctcgcgag ggggactgat gccaacctgg ggcgattcgc
     3661 agcgctactc ggtagactat tcgaatacgg cctggggctc cgacgtggat ttctccgtac
     3721 tgcaggcgca aaacgtctgg attcggactt tgtacgatcg ccaccgtttt gtgatgcgcg
     3781 ccaatttggg ctggatagaa accggtgatt tcgacaaagt tccgccggat ttacgtttct
     3841 tcgccggggg cgaccgcagt attcgcggct ataaatacaa atctatttcg cctaaagata
     3901 gcgacggcaa tcttaaaggc gcctcaaaac tggcaaccgg atcgctggag taccagtata
     3961 acgtcaccgg caaatggtgg ggggcggtgt ttgtcgatag cggcgaggcg gttagtgata
     4021 ttcgccgtag cgatttcaaa accgggaccg gggtcggcgt gcgctgggcg tcgccggttg
     4081 ggcctgtcaa actcgatttt gccgtaccgg tcggcgacaa agacgaacac ggtttacagt
     4141 tttatatcgg tctggggcct gaattatgag tttatggaag aaaataagcc tcggcgtgtt
     4201 gattttcatt gtggtgttac tggcgagcgt tgcgtttctg gtcgggacga cgacggggct
     4261 gcatctggta ttcggtgcgg cgaaccgctg ggtgccgggg ctggatattg ggcaggtcac
     4321 cggcggctgg cgggacttat cgttaaaaaa tatccgctat gagcagccgg gcgttgcggt
     4381 aaatgcgggc gaaattcatc tggccgtcgg gcttgattgc ctgtggcgca gtagcctgtg
     4441 cgtcaatgat ctggcgctaa aagacattaa tgtcgctatc gacagcaaaa aaatgcctcc
     4501 ttccgaaccg gcgcaagaag aggaagaaag cgggccgctg aacctctcca cgccctggcc
     4561 catcacgctg tcgcgcgtgg cgctgaataa catcaatatc aagattgatg acactaccgt
     4621 ttcggtgctg gattttacct acgggctggc atggcaggag aaaaacctga ccctgaaacc
     4681 gacgcggctt cagggactgc tgatcgcgct gccgaaggtc gctgaggtgg cgcaggaaga
     4741 ggtggttgaa cccaaaatcg agaaacctca accggatgaa aagccgcttg gcgaaacgct
     4801 aaaagatctg tttgcaaaac cggtaatgcc ggagatgacc gatgttcacc tgccgctcaa
     4861 tctgaatatc gagtcatttc gcggcgagca gctacgcatc accggcgata ccgatctgac
     4921 ggtgcgcacg atgctgctta aagtcagcag tatcgacggt aatatgaagc tggatactct
     4981 ggatatcgac gccaaccagg gcacggtgaa agcctccggt acggcgcagc tcgccaataa
     5041 ctggccggtt gatattacgc tcaacagtac gctgaatatc gatccgctaa agggtgaaaa
     5101 gatcaaactc aaggtcggcg gcgcgttacg cgaacaactg gaggtcaggg tgaacctttc
     5161 cgggccgatg gatgtcgcgc ttcgcgccca gacgcggctg gcggaggccg gtttaccgct
     5221 caatcttgag gtcgtcagcc aacgcattgc ctggccattg acgggtgata cccagtttca
     5281 ggctgacgat ctgaagctca aactgagcgg taagatgacc gactatacgt tgtcgatgcg
     5341 aaccgccgtg aaaggacaag atattccgcc ggcgaccatc acgctggatg ctaaagggaa
     5401 tgagcggcag attaatctcg ataaactcac cgtcgccgct ctggagggaa aaaccgaact
     5461 gaaagcgctg gtggactggc agcaggcgat tagctggcgt ggcgaactga cgctgaatgg
     5521 catcaatacc gctaaagaga tcccggactg gcccgcgaaa cttaacggcg tcatgaaaac
     5581 caaaggcagc ctctacggcg gcacctggca gatggatgtc ccggagctca agctgaccgg
     5641 taatgtgaag cagaacagcg ttaacgtcaa cgggacgcta aagggcaaca gctacatgca
     5701 gtggacgatc ccggggctgc accttgcgct gggcccaaac agcgccgata taaaaggcga
     5761 gcttggcgtt aaggagctga atcttgacgc cgccatcgat gcgccagggc tggataatgc
     5821 gctgccaggg ctgggcggca tggcaaaagg aatcgttaaa gtccgcggta cggtagaagc
     5881 gccgcagctg ttggcggata tcaccgccca cggtctgcgc tggcaggagc tgtctatcgc
     5941 ccaggcgcgc atcgagggcg atattaaatc caccgatcag atagcgggcc atctcaacgt
     6001 tcgcgtagag cggatttcgc agcccgacgt taacatcaat ctggtgacgc ttgacgccaa
     6061 aggcagcgag aagcagcatc agctacagct ccgtgttcag ggagaaccgg tatccggtca
     6121 actctccctg acaggcagtt ttgatcgcga ggaggcgcgc tggaaaggga cgttaagcga
     6181 cacccgtttc cagacgccag tggggccatg gtcgttgacc cgcgcgattg cgctggacta
     6241 ccgtaataaa gaacaggaaa tcagtatcgg gccacattgt tggctgaacc cgaacgccga
     6301 gctgtgcatc ccgcaaacca ttgatgcggg cgccgcagga cgggcgttgg tcaatctcaa
     6361 ccgctttgat ctggcgatgc tgaagccatt tatgcctgat accactcagg ccagcggggt
     6421 ctttagcggg aaagcggacg tgtcgtggga caccacccag gagggattgc cgcaggggaa
     6481 ggtcacactt tccggtcgta acgtgaaggt cacgcagacc gtcaatgacg cgccgttacc
     6541 ggtcgcgttt gagacgctga acctcagcgc cgatctgcac aataatcgcg ccgagctggg
     6601 atggctgatt cgcctgacga acaatggtca attcgatggc caggtgcagg taaccgatcc
     6661 tcaggggcgg cgcaatctcg gcggtaacgt caacatgcgc aatctcaatc tggcgatggt
     6721 caaccctgtc tttttgcgcg gcgaaaaagc ggcgggaatg ttaaacgcca ggctacgtct
     6781 gggcggcgat gtgcaaagcc cgcagttgtt tggtcagttg cagcttagcg cgctggatat
     6841 tgacggtaat tttatgccgt ttgagatgca gccgagccag ctcgccatga actttagcgg
     6901 tacgcgctcg acgctcgctg gtatcgtgcg aacacaacaa gggcaaatta acctgaacgg
     6961 taacgccgac tggagccaga ttgacaactg gcgcgcgcgg gtgacggcga aaggcagtcg
     7021 ggtgcggatt accgttccgc cgatggtgcg cctggatgtc tcgccggatg tggtctttga
     7081 cgcgacgcct tcgctgttca cgttggatgg gcgtgtggac gttccgtggg cacgaattgt
     7141 ggtgcacgac ctgccggaga gcgcggtcgg cgtctccagc gatgtggtta tgctcaataa
     7201 tgacctgcaa ccagaaacgc cgcagacagc atctattccc atcaacagta atctgacggt
     7261 acatgtcggc aacaacgtgc gcatcgacgc cttcgggctt aaagcgcgtt tgaccggcga
     7321 tttgaaagtc gcgcaggata agcaggggct ggggctaaat ggtcaaatca atattcctga
     7381 cggccgattc cgcgcctacg gccaggacct gcttgttcgt aaaggcgagc tgctgttctc
     7441 cggcccgccg gatcagccgc tgctcaatat cgaagcgatc cgtaaccctg acgccaccga
     7501 agacgatgtc attgcgggcg tgcgcgtcac aggcacagct gatgaaccca aagcggaaat
     7561 cttctccgat ccggcgatgc cgcaggctga agcgctttct tatctgctgc gtgggcaggg
     7621 gttggacagc aatcagagtg atagcgcagc aatgacttcc atgcttattg gcctgggggt
     7681 tgcgcaaagt ggtcaggttg tgggtaaaat cggagagaca ttcggtgtaa gtaatctggc
     7741 gctggacacg caaggggtgg gcgattcgtc ccaggttgtg gtcagcggct atgtactgcc
     7801 gggtctacag gtgaagtatg gtgtagggat atttgactct ctggcgacgc tcacgttacg
     7861 ttatcgcctg atgcctaagc tatatctgga agcagtgtct ggcgtagatc aggcacttga
     7921 tttgctctat cagtttgagt tttagcaatg cgaatatttg tctatggcag tttacgacag
     7981 aaacaaggca acagtcactg gatgaccaat gcccaattgc ttggcgatta ccgtatcgat
     8041 aactaccagt tgtatagtct gggccactat ccaggcgcag ttccgggaaa cggagcggta
     8101 tacggtgaag tttatcgaat tgataacgcc acgctggccg aacttgatgc tttgcgcacc
     8161 aggggcggtg aatacgcacg ccagttaatc cagacgcctt acggcagcgc atggatgtat
     8221 gtatatcaac gtcctgttga tgggttaact ctgattgaaa gcggtgactg gttagacaga
     8281 aaccagccct gaactgaaca cgccaccctc gggtggcgtt gttttttaca ttctggctga
     8341 tggcgttaac gccgggcatg gtgagctctt attctgccgt agatcaataa tgacgcgccg
     8401 cccaggataa caatgcatcc gagaaccata aatccctgca tatagctgcc ggttgtccgg
     8461 taaaaatagc cgaccattag gcctgccaac gtaccgccgc cgccggcgcc gatgccatta
     8521 ataataccgg aggctgggcc aatcgcatgg ggtttaacgt tcgactggat aatcgaccag
     8581 atattggggg taaagctggc ggcataataa cccatcgcca gggtaatgag cgtgatttta
     8641 aagcccggcg catcgacaaa tggcaggaga aataacatca cgccggggat tagtaggccc
     8701 agtgaagcaa taagtacacg tttttgtgtc ttatcactga tccatgagat ggggattgcc
     8761 agtataaccg cagtcagata aggcagagaa ctgaccaatg ctttactgaa tccggtatag
     8821 ccgagagaat tgacaaccat ggggatccat aacgtaattc cccagaacaa catcccttga
     8881 gtgatgtagg taaaaataag gagtaggaag ggggttccgc ccagcgattc cagagtaagt
     8941 ttagttttct ctgttggcgc cggcgcacga taataaggcg cttcttcctg ttttttcagc
     9001 attgttatat aaagtggaac cacaacaaca atgccgatca taccagtgat aataaaaaca
     9061 tttcgccaac cgaaggcagc atccagcggg gacaaaatca taaatcccag gcctaatgcc
     9121 aggaactgtc cataatactg gataatgctg ttcgcctgcg tccgttcttt gtctgaaaac
     9181 cagtcgctgg cgaagcggga ctgctgcggc caataaatgc cttcggtaat gccaagcacc
     9241 agccgacaaa tcaaaataac gtacactgac gaggtaaatc cgacaaaaac ggtcgcaatc
     9301 gaccagatta gcaccatcag aatgactatt tttttcggat cgtatcgctg ggtaaatacg
     9361 ccgccaaaaa tatttgaaaa ggcatagcca ataagaaata tggttaatac aatgctggcc
     9421 gttgcgccat caatattcag gtcgtgtgta atcgtaggta acgtaacgga aagattagaa
     9481 cggtcaagat aagcaacaaa aaggccgaac attaatgtcg cgccgatccg tagccatttt
     9541 tgcattgagg tcatttttca actccgtttg gccgcgtgcc aaaatcaatt tgacgaaata
     9601 atatctcacc ggattttatg gtcatttgtg gtaccagcac atgcgtcccc gtgagcgttt
     9661 caccatgaat atcggcaaat tcaacatgcc tgttttttaa tttaaagatg gcgatatcgg
     9721 caaatgcccc aggggccagc gtaccaattt ctgctgccat acccattaaa actgctgggg
     9781 tatgggtaca ggcgttaatg acatcggcaa gcgtgacgcc gagtgctaaa tatttcgata
     9841 aaatccatgg taaggcgtaa acaggccagg cgagtttagt gatggttgag agatcgctac
     9901 tgatgatatc cggaagaaag ccattggcga tggcccggcg tgccgtgttc attgaaaaat
     9961 ggctgcgacc attggcggca tcaaatataa cgcctcgttc tcttgcatga cggacttcgg
    10021 ctaagaccgc gccttcatta gtaagaatgg tgctaccttt gccgtgaaac gcatgagcga
    10081 taatatcgcc gcggcgtagc aaggagacaa gttctttcat gggaacgacg ggatgagtcg
    10141 agtgtattgc tacggggcac cttaaatcgt tggcaatacg aagggattca gtcagcggtt
    10201 ttaagccata ttcagcaatg tcctcagtct gaaccttgag ttttaatccc tgaagaacgt
    10261 tgcgatactg gcgaaacagc gcgtggatct tattttcatc aatattgtca ggatcataat
    10321 tttcttgtga ccagatttgg cccggcggcg acacggtcag aaacgctttg attcgaactt
    10381 tgctggcgca aatcaccgtt cggtagaagg catcaaagtt tgccgtaccg gcagaacctg
    10441 catccacgac ggtggtgacg ccattcggcg gcatgtacat atcaggcctg acgccgcctt
    10501 ccgtcgcatc ataaaaaaca tgcgtgtgat aatcgataag accgggagtg acgatcatgc
    10561 cgtcggcatg gataatccgg gtctccgaag ttacaggata tttatcggca tcaacgataa
    10621 tatcgttaat gatgcgtaac ttgttaatct cattaatatt acgagcggga tcgatgatat
    10681 gtccaccggt aattaatata tcatttttca tcataatctc ttaaaatagt aaataattat
    10741 ggcagccctt gaaaatatat taaaaagtgt gttttgagcg gatgttatgt tggattgaaa
    10801 atacagttat tggtagggag agcttaggat accttattaa aaaggtaatc gggcttatgc
    10861 actaaataag aatttagcgc ttgctaatat ttagggcgta agtccatggg agtctggggg
    10921 cattcgcaaa acaattatta tcttaagctt tttagagaaa acgtgagcgt attcaaccct
    10981 ttttaataaa aaataaggta aagtcttatt cattctgtga atgttaaact aataatgata
    11041 aaaattgtgt tctattcatt agccaataaa aaggccctca ttactatgag agcctttatc
    11101 ttgacgatta tgtaaaagcg aacttatttc ttcgctgcgc gctcgaaaga ggcaacgatt
    11161 tccgctttag ccgcttcggc gttgtcccaa ccgtcaactt tcacccattt gcctttttcg
    11221 agatctttat aatgctcgaa gaaatgagtg atctgcgctt tcagcagttc cggcagatcg
    11281 ttcacatctt taatgtgatc gtactctttg ctcagtttgg tgtgcggtac ggcaaccagt
    11341 ttcgcatctt caccggattc gtcggtcatt ttcagtacgc caaccggacg gcaacggatg
    11401 acggcgcctg gctgcagcgg gtacggcgtc gggaccagaa cgtctaccgg gtcgccgtcc
    11461 agagacaggg tatggttgat gtaaccgtag ttgcacggat agaacatcgc ggtggacatg
    11521 aagcggtcaa cgaacagcgc gccgctctct ttgtcaactt cgtatttgat cggatctgcg
    11581 ttagccggga tctcgataac gacgtagata tcttccggca gttctttacc cgccgggacg
    11641 ttgagtaagc tcatgtctgt ttcctttgaa gttatgacaa acaagtggcg agtattatag
    11701 ccaactcacg ccgaaagtct tcgcttgttt tcgtttccgc ctcatctggc gcgtcgttgc
    11761 ggagcataaa cgacaaaggt taagaaccga aaaaatcacg ggcctgataa ggcaacgccg
    11821 ccatcggaca tcttattgcc caatggcggc ttcatgcgtt attccgcatg gtggtaaaga
    11881 ttacgcgtcc gggtattcgc ggataaagcg ttccacatcg tcaaccatat ggcggttgcc
    11941 gacgaagaac gagcggcgct ggtgcaggct ttccggaatg atatccagaa tacgttcttt
    12001 accatcgctt gctttgccac cggcctgttc cgcgaggaac gccatcgggt tgcattcata
    12061 cagcagacgc agtttcccct gcggatggct ggcggtgctg gggtagagat agatgccgcc
    12121 tttcagcagg ttgcggtgga aatcggccac cagagagcca atgtaacgtg aggtataagg
    12181 gcgacttgtt gaactatcct cttcctggca gaatttgatg tacttcttca cgccattcgg
    12241 gaacttaatg tagttgcctt cgttaatgga gtaggtttta cccttttccg ggaaacgcat
    12301 acgttcttgg cacagacaga acacgcccaa cgacggatcg taggtgaaag cgtgtacgcc
    12361 gcagccggtg gtgtaaatca gcatggtgga cgagccatac acgacatatc ccgcagcgac
    12421 ctgtttgttg ccgggttgca ggaaatcttc ttcggtgacc ggcgtgccga cgggcgtcac
    12481 gcggcgataa atcgagaaaa tcgtaccgac agagacgtta acgtcgatgt tagaagagcc
    12541 atccagaggg tccatcagca ccacatattt cgcgtgttcg cagccttcaa agacgacaat
    12601 ttcgtcctct tcttccgatg cgatgcccgc tacaatatcg cgcgctttta gtgcagcttt
    12661 cagtttctcg ttcgcgaaca gatcgagttt ctgctgaacc tcgccctgta cgttctcagc
    12721 acagctggca cccaggatat cgaccagacc ggccttgttg atatcgcggt ggatgatctt
    12781 ggcgcccaat tttattgccg acagcaaagc agtgagctca ccggtagcct gagagaactc
    12841 gtgctgcttt tcgacaataa attcacctaa cgttttcata acactttccc tgcaattgat
    12901 tggagtaaag cgaccgtaac aatcttaaca aacatttcag atgatgcgct caggtgaatc
    12961 gcgccagcaa agtacagatt tacctgaaat gcgtttctca cttgccagac atgtgcgtaa
    13021 aatggctcgc agataaaaaa aggatagtga cgtatgcgca ttcatatttt gggaatttgt
    13081 ggcactttca tgggggggct ggcgatgctg gctcgctcgc ttggtcatga agtaacgggt
    13141 tcggacgcca atgtgtatcc gccgatgagt accttacttg agaagcaagg cattgatctg
    13201 atccagggtt atgacgccag ccagctcgat ccgcagccag atctggtgat tatcggcaat
    13261 gcgatgacgc gcgggaatcc gtgcgtggaa gcggtgctgg aaaaaaacat tccctttatg
    13321 tctggtccac agtggctgca tgactttgtg ttgcgcgacc gctgggtact ggcggtcgcc
    13381 ggtacccacg gtaaaaccac gaccgcaggc atggcgacct ggatactgga agcgtgcggg
    13441 tacaaaccgg gcttcgtgat cggcggcgta ccgggcaatt ttgaggtttc cgcacgcctg
    13501 ggcgagagcc cattctttgt tatcgaagcg gatgagtacg actgcgcgtt ctttgataaa
    13561 cgttctaaat ttgtgcatta ctgcccgcgg acgctgatcc tcaacaacct tgagtttgat
    13621 catgccgaca tcttcgacga tctgaaagcg atccagaagc agttccacca cctggtgcgc
    13681 atcgtgccgg ggcaggggcg catcatctgg ccggaaaacg acatcaacct gaaacagacc
    13741 atggcgctgg gctgctggag cgagcaggag ctggtgggcg agcagggaca ctggcaggcg
    13801 aagaagctga ctacggatac ttccgagtgg gaagtgtggc tggacggcga aaaagtcggc
    13861 gatgtgaaat ggggcctggt c
//
LOCUS       DAGWFR010000108        13876 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.110, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000108 DAGWFR010000000
VERSION     DAGWFR010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 13876)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13876)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13876
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.110"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..785)
                     /gene="malQ"
                     /locus_tag="MOX77_003117"
     CDS             complement(<1..785)
                     /gene="malQ"
                     /locus_tag="MOX77_003117"
                     /EC_number="2.4.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-alpha-glucanotransferase"
                     /protein_id="HCA3358576.1"
                     /translation="MENKRLDSAALAAGISPSYINAHGKPQSIGAETKRRLLAAMHGT
                     TTGPQAVVPNVKVYTAGKKMALPVEGRGEFAWLLTTEEGEHYKGRVTGGKKLNLPATL
                     PEGYHTLTLTQDEQRTHCRIIVAPPRCYEPQALLEGKKLWGACVQLYTLRSEKNWGIG
                     DFGDLKSMLVDVATRGGAFIGLNPIHALYPANPESASPYSPSSRRWLNVIYIDVNAVE
                     DFRLSEEAQAWWLMPATQQKLRQARDAQWVDYATVTALKITALR"
     gene            complement(795..3188)
                     /gene="malP"
                     /locus_tag="MOX77_003118"
     CDS             complement(795..3188)
                     /gene="malP"
                     /locus_tag="MOX77_003118"
                     /EC_number="2.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltodextrin phosphorylase"
                     /protein_id="HCA3358577.1"
                     /translation="MSQPTFNKDQFQAALTRQWQRFGLLSASDMTPRQWWQAVSGALA
                     ELLSAQPVAQPTKGQRHVNYISMEFLIGRLTGNNLLNLGWYQDVSDVLKAHDINLTDL
                     LEEEVDPALGNGGLGRLAACFLDSMATVGQSATGYGLNYQYGLFRQSFVEGKQMEAPD
                     DWHRGSYPWFRHNEALDVQVGIGGKVTKEGRWKPGFVITGQSWDLPVLGYRNGVAQPL
                     RLWQATHAHPFDLTKFNDGAFLRAEQQGIDAEKLTKVLYPNDNHTAGKKLRLMQQYFQ
                     CACSVADILRRHHLAGRKLHELADYEVIQLNDTHPTIAIPELLRVLLDEHQMSWDDAW
                     AITSKTFAYTNHTLMPEALECWDERLIKALLPRHMQIIKQINDRFKALVDNTWPGDKQ
                     VWAKLAVVHDRQVRMANMCVVSGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTN
                     GITPRRWIKQCNPQLAALLDKTLKKEWANDLDQLINLEKYADDATFRQQYRDIKRANK
                     ERLVKFIQARTGIEISSHAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVP
                     RVFLFGAKAAPGYYLAKNIIFAINKVAEAINNDPAVGDKLKVVFLPDYCVSAAEMLIP
                     AADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGHTVE
                     EVKALKAKGYDPVKWRKKDKVLDAVLKELESGQYSDGDKHAFDQMLHSLGKQGGDPYL
                     VMADFAAYVEAQKQVDALYRDQEAWTRAAILNTARCGMFSSDRSIRDYQARIWQAKR"
     gene            3782..6487
                     /gene="malT"
                     /locus_tag="MOX77_003119"
     CDS             3782..6487
                     /gene="malT"
                     /locus_tag="MOX77_003119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000907024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator MalT"
                     /protein_id="HCA3358578.1"
                     /translation="MLIPSKLSRPVRLDHTVVRERLLAKLSGANNFRLLLVTSPAGYG
                     KTTLVSQWAAGKNELGWYSLDEGDNQQERFASYLIAAIQQATGGHCSTSEAMAQKRQY
                     ASLTSLFAQLFIELAQWHRPLYLVIDDYHLITNPVIHDAMRFFLRHQPENFTLVVLSR
                     NLPQLGIANLRVRDQLLEIGSQQLAFNHQEAKQFFDRRLSSPIEAAESSRMCDDVAGW
                     ATALQLIALSARQNHTSAHHSARRLAGINASHLSDYLVDEVLDNVDVSTRHFLLKSAI
                     LRSMNDALIVRVTGEENGQMRLEEIERQGLFLQRMDDTGEWFSYHPLFGSFLRQRCQW
                     ELAAELPEIHRAAAESWMEQGFPSEAIHHALAAGDAQMLRDILLNHAWGLFNHSELAL
                     LEESLKALPWESLLENPRLVLLQAWLMQSQHRYSEVNTLLARAEQEIKGVMDGTLHAE
                     FNALRAQVAINDGNPEEAERLAKLALDELPLAWFYSRIVATSVHGEVLHCKGNLSQSL
                     SLMQQTEQMARHHDVWHYALWSLIQQSEIQFAQGFLQAAWETQERAFQLIKEQHLEQL
                     PMHEFLVRIRAQLLWAWARLDEAEASARSGIAVLSTFQPQQQLQCLTLLVQCSLARGD
                     LDNARSQLNRLEKLLGNGRYHCDWISNADKVRVIYWQLTGDKKSAANWLRHTPKPAFA
                     NNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQ
                     SGRKNDAQRVLLDALQLANRTGFISHFVIEGEAMAQQLRQLIQLNTLPEMEQHRAQRI
                     LRYINQHHRHKFAHFDEGFVERLLNHPDVPELIRTSPLTQREWQVLGLIYSGYSNEQI
                     AGELAVAATTIKTHIRNLYQKLGVAHRQDAVQHAQQLLKMMGYGV"
     gene            complement(6561..7319)
                     /locus_tag="MOX77_003120"
     CDS             complement(6561..7319)
                     /locus_tag="MOX77_003120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000815090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR family transcriptional regulator"
                     /protein_id="HCA3358579.1"
                     /translation="MKQTQRHDAIIELVKKQGYVSTEELVEHFSVSPQTIRRDLNDLA
                     EQNMILRHHGGAALPSSSVNTPWHDRKATQTEEKERIARKVAAQIPNGSTLFIDIGTT
                     PEAVAHTLLGHSNLRIVTNNLNVANTLMAKEDFRIILAGGELRSRDGGIIGEATQDFI
                     AQFRLDFGILGISGIDSDGSLLEFDYHEVRTKRAIIENSRHVMLVVDHSKFGRNAMVN
                     MGSISMVDAVYTDTLPPPGVMQVIADHHIQLELC"
     gene            complement(7412..8242)
                     /gene="glpG"
                     /locus_tag="MOX77_003121"
     CDS             complement(7412..8242)
                     /gene="glpG"
                     /locus_tag="MOX77_003121"
                     /EC_number="3.4.21.105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease
                     GlpG"
                     /protein_id="HCA3358580.1"
                     /translation="MLMITSFANPRVAQAFVDYMATQGVILTIQQHNQSDIWLADESQ
                     AERVRVELARFIENPGDPRYLAASWQSGQTNSGLRYRRFPFLATLRERAGPVTWIVML
                     ACVVVYIAMSLIGDQTVMVWLAWPFDPVLKFEVWRYFTHIFMHFSLMHILFNLLWWWY
                     LGGAVEKRLGSGKLIVITVISALLSGYVQQKFSGPWFGGLSGVVYALMGYVWLRGERD
                     PQSGIYLQRGLIIFALLWIVAGWFDWFGMSMANGAHIAGLIVGLAMAFVDTLNARKRT
                     "
     gene            complement(8318..8644)
                     /gene="glpE"
                     /locus_tag="MOX77_003122"
     CDS             complement(8318..8644)
                     /gene="glpE"
                     /locus_tag="MOX77_003122"
                     /EC_number="2.8.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate sulfurtransferase GlpE"
                     /protein_id="HCA3358581.1"
                     /translation="MEQFECITVEEAYQKLHQGAAVLVDIRDPQSYAMGHAPQAFHLT
                     NDTLGAFMREHGFDTAVMVMCYHGNSSKGAAQYLLQQGYDAVYSIDGGFEAWHRRFPA
                     DVANGA"
     gene            8843..10351
                     /gene="glpD"
                     /locus_tag="MOX77_003123"
     CDS             8843..10351
                     /gene="glpD"
                     /locus_tag="MOX77_003123"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase"
                     /protein_id="HCA3358582.1"
                     /translation="METKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACATSSA
                     SSKLIHGGLRYLEHYEFRLVSEALAEREVLLKMAPHIAFPMRFRLPHRPHLRPAWMIR
                     IGLFMYDHLGKRTSLPGSTGVRFGADSVLKPEIVRGFEYSDCWVDDARLVLANAQMVV
                     RKGGEVLTRTRATAARRENGLWIVEAEDIDTGKKYVWQARGLVNATGPWVKQFFDEGM
                     HLPSPYGIRLIKGSHIVVPRVHNQKQAYILQNEDKRIVFVIPWMEEFSIIGTTDVEYK
                     GDPKAVKIEESEINYLLKVYNAHFQKQLGRDDIVWTYSGVRPLCDDESDSPQAITRDY
                     TLDIHDENGKAPLLSVFGGKLTTYRKLAEHAMEKLASYYPGIGPAWTKTCVLPGGDID
                     GSREDYAAKLRRRYPFLTESLARHYSRTYGSNTEWILGEATSLLDLGEDFGHEFYEAE
                     LKYLVDHEWVRRTEDAIWRRTKEGMWLTAEQQSRITQWLAAYVEKHQLSLAS"
     gene            complement(10443..12890)
                     /gene="glgP"
                     /locus_tag="MOX77_003124"
     CDS             complement(10443..12890)
                     /gene="glgP"
                     /locus_tag="MOX77_003124"
                     /EC_number="2.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010436446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen phosphorylase"
                     /protein_id="HCA3358583.1"
                     /translation="MNAPFTYASPTLSVEALKHSIAYKLMFTIGKDPVIANKHEWLNA
                     TLFAVRDRLVERWLRSNRAQLSQETRQVYYLSMEFLIGRTLSNALLSLGIYDDVKGAL
                     EAMGLDLEELIDEENDPGLGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNI
                     VDGRQKESPDYWLEYGNPWEFKRHNTRYKVLFGGRIQQEGKKARWIETEEILAVAYDQ
                     IIPGYDTDATNTLRLWNAQASSEINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTY
                     SGRELRLRQEYFLVSATVQDILHRHYQLHKTYENLADKIAIHLNDTHPVLSIPELMRL
                     LIDEHKFSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKILPRHLQIIFEINDYF
                     LKTLQEQYPNDTSLLGRASIIDESNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLF
                     ADFAKIFPTRFCNVTNGVTPRRWLALANPPLSDVLDENIGRTWRTDLSQLSELKQHCD
                     YPLVNHAVRQAKLENKKRLAVVIAQQLNVVVNPKALFDVQIKRIHEYKRQLMNVLHVI
                     TRYNRIKENPEADWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKV
                     VFIPNYSVSLAQVIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMQ
                     EHVGEENIFIFGNTAEEVEALRRQGYKPRDYYEKDEELHQVLTQIGNGVFNPEEPGRY
                     RDLVDSLINFGDHYQVLADYRSYVDCQDKVDELYRRPEEWTTKAMLNIANMGYFSSDR
                     TIKEYAENIWHIDPVRL"
     gene            complement(12910..>13876)
                     /gene="glgA"
                     /locus_tag="MOX77_003125"
     CDS             complement(12910..>13876)
                     /gene="glgA"
                     /locus_tag="MOX77_003125"
                     /EC_number="2.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycogen synthase GlgA"
                     /protein_id="HCA3358584.1"
                     /translation="VFTVHNLAYQGMFYAKHMDDIELPWSFFNMHGLEFNGQLSFLKA
                     GLYYADHITAVSPTYAREITEPQFAYGMEGLLRQRHLEGRLSGILNGVDEKIWNPESD
                     LLLASRYTRDTLEEKAENKRQLQIAMGLKVNDKVPLFAVVSRLTNQKGLDLVLEALPG
                     LLEQGGQLALLGAGDPVLQEGFLAAAAEHPGQAGVQIGYHEAFSHRIMGGADVILVPS
                     RFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDSSLENLADGIASGFVFEDSNAWSLL
                     RAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK"
BASE COUNT         3200 a         3946 c         3564 g         3166 t
ORIGIN      
        1 cgcagcgccg tgattttcag cgcggtaacg gtagcgtaat ccacccattg cgcatcgcgc
       61 gcctgtcgca gcttttgctg tgtggcgggc attagccacc atgcctgcgc ctcttcgctc
      121 aggcggaaat cttcgacggc gttgacgtcg atatatatca cgttcagcca gcgacgagac
      181 gaggggctgt agggactggc gctctccgga ttcgccggat aaagcgcgtg gatcgggttc
      241 aggccgataa acgcgccgcc gcgtgtcgcc acgtcgacca gcatcgactt caaatcgccg
      301 aaatcgccaa taccccagtt tttttctgaa cgcagagtat aaagctggac gcaggccccc
      361 cacagttttt tcccctccag cagcgcctgc ggctcatagc atcgcggcgg ggcaacgata
      421 atacggcagt gcgtacgctg ttcatcctgg gtcaacgtca gggtgtggta gccctccggc
      481 aacgtagccg gcaggttaag ttttttaccg cccgtcacgc gccctttgta atgctcgccc
      541 tcttccgtag tcagcagcca ggcaaactca ccgcgcccct ctaccggcaa cgccattttt
      601 ttacccgcgg tataaacctt cacattcggc acgaccgcct gtggtcctgt tgtcgtgccg
      661 tgcatcgccg ccagcaaacg tctcttggtt tcagcgccaa tagactgcgg tttgccatga
      721 gcattgatgt aactggggct gatccccgcc gccagcgcgg cactatcgag acgtttattt
      781 tccatcgcgc tcccttagcg ttttgcctgc cagatacggg cctgataatc gcgaatagag
      841 cgatcggaac tgaacatacc gcagcgcgcg gtattgagga tcgcggcgcg cgtccacgct
      901 tcctggtcgc gatacagcgc atccacctgc ttttgcgcct cgacataagc ggcgaagtcc
      961 gccatgacca ggtacggatc gcccccctgt ttgccgaggc tatgcagcat ctggtcaaag
     1021 gcatgtttat cgccatcgct gtattgaccg ctttccagct cttttagtac cgcatccagc
     1081 actttgtctt ttttacgcca tttcaccgga tcgtagcctt tggctttgag cgccttgacc
     1141 tcttccacag tatggccaaa gataaagata ttctcttcac ccaccttttc agcgatttca
     1201 acgttagcgc cgtccagcgt tcccactgtc aacgccccgt tcagcgccag tttcatgttg
     1261 ccggtgccgg acgcctcttt cccggcagta gaaatttgct cggaaatatc cgccgccgga
     1321 atgagcattt ccgccgccga gacgcagtaa tccggcagga aaaccacctt cagcttgtca
     1381 cccaccgccg ggtcgttatt aatggcttcc gcaaccttat tgatagcaaa aatgatgttc
     1441 ttcgccaggt aatagcccgg cgccgccttc gcgccaaaca ggaatacgcg cggtacgcgg
     1501 tcagcctgcg ggttttcgcg gatctctttg tacagcgcca gaatatgcaa cagattcaga
     1561 tgctgacgct tgtactcgtg caggcgtttg atctgaatat caaaaatcgc atggctcgaa
     1621 atctcaatcc cggtacgggc ctggatgaat ttcaccagcc gttctttgtt cgcccgtttg
     1681 atgtcgcgat attgttgacg gaatgtggcg tcgtcagcgt atttttcgag gttgatcaac
     1741 tggtcgagat cgttagccca ctcttttttc agcgttttat ccagcaacgc cgcaagctgc
     1801 ggattgcact gtttaatcca gcgacgcggt gtaatgccgt tggtgacatt gtggaatttg
     1861 ttcggccaaa gctggtgata ttccgggaac agatctttca ccaccagatc ggagtgcagc
     1921 gccgccacac cgttgaccgc aaagccgctg accacgcaca tattggccat gcgcacctga
     1981 cggtcatgca ccaccgccag ttttgcccat acctgcttat cgccaggcca ggtgttatcg
     2041 accagcgcct taaagcgatc gttaatctgc ttgataatct gcatatgacg cggcaacagc
     2101 gctttgatta acctctcatc ccagcactcc agcgcttctg gcatcagggt gtggttggtg
     2161 taggcgaagg ttttgctggt gatagcccag gcgtcatccc agctcatctg gtgttcatcc
     2221 agcaatacgc gcagcagttc agggatggca atagtcgggt gggtatcatt tagctgaatg
     2281 acctcataat ccgccagctc atgcagcttg cgtccggcca gatgatggcg gcgcagaata
     2341 tccgctaccg agcaggcgca ctggaagtat tgctgcatca ggcgcagttt tttgcccgcc
     2401 gtgtggttat cgttgggata aagcaccttc gtcagttttt ccgcatcgat accctgctgt
     2461 tccgcccgca ggaaagcgcc gtcgttgaat ttggtcagat caaacggatg cgcgtgggtc
     2521 gcctgccaca aacgcagcgg ttgcgcgacg ccgttacgat agcctaacac cggcagatcc
     2581 caggactggc ctgtaatcac aaaacctggt ttccagcgcc cttctttggt gactttaccg
     2641 ccgattccaa cctggacgtc cagcgcctcg ttgtggcgga accacggata gctgccgcga
     2701 tgccagtcat ccggcgcttc catctgcttg ccttcaacaa atgactgacg gaacagccca
     2761 tactggtagt tcagaccata gcccgtagcg gactgcccga cggtggccat cgaatcgagg
     2821 aagcaggcgg ccagacgtcc cagaccaccg ttgccgagcg ccggatcgac ttcctcttcc
     2881 agcagatcgg tcagattaat atcgtgcgct ttcagcacat cgctaacgtc ctggtaccac
     2941 cccagattta acaggttatt tcccgtcagg cggccaatca aaaattccat cgaaatgtag
     3001 ttcacatgac gctggccttt cgtcggctgc gctaccggtt gcgcgctcag taattccgcc
     3061 agcgcgccgc taacggcctg ccaccactga cgaggcgtca tgtcggacgc cgacagtaaa
     3121 ccgaaacgct gccactgacg cgtcagggcg gcctggaatt gatctttatt gaaggttggc
     3181 tgtgacatag gaaatccgtc ctcgggtaat aaaacaacgt tatcgctagt ttgccaggct
     3241 cgatgttgac cttcctcctc ccggcactga ttagggaggg aggaggagcg gggatgagca
     3301 taaaagtgtg atcgccgcca cttacccctg tataaacgcg ccgattcctg tcaacgacac
     3361 ccagtgttac gcataatcaa atgaataaac agaaataaca gtaaaccgcg gagggatatt
     3421 ttcgaagatt atatgaacgc caaaatagtt tattacctga aatattcagc ggcgggaggt
     3481 tcactaactt aacataatta attaaacgcc tggtatcgcc attgtgttaa atccgcatcc
     3541 tgtccaggac attatttaca ataacggaaa tatgacctca gcccagctct gacgctcgtt
     3601 tcaaccgcgc cgaatacttt tttaataccg ttatttagaa ttgtgacaga gtgcaaattc
     3661 agacacataa aaagtctgct tagcttgcat taaaatgctt tctggccgac cttatatcta
     3721 ttaattacga agcgcaaaaa aaaatcgcag ttcccccatt tcccacagtg aagtgattgc
     3781 tatgttgatt ccgtctaaat taagtcgtcc ggttcgtctc gaccataccg tggttcgtga
     3841 gcggctgttg gctaaacttt ccggcgcgaa caatttcagg ctcctcctgg taaccagtcc
     3901 tgctggctat gggaaaacca cgcttgtctc acagtgggcg gcgggcaaaa atgaattagg
     3961 ctggtactct ctcgacgaag gcgataacca gcaagagcga ttcgccagtt acttaatcgc
     4021 cgctatccaa caggccaccg gcggacactg ctctaccagc gaagcgatgg cgcaaaaacg
     4081 tcagtacgcc agcctgacgt ctctcttcgc acagctcttt attgaactgg cgcagtggca
     4141 tcgcccgctt tatctggtga ttgacgacta ccatttgatt accaatccgg tgattcacga
     4201 cgcgatgcgc tttttcttac ggcatcagcc ggaaaatttc accctggtgg tgttatcgcg
     4261 taatttgccg caactgggca tcgctaacct gcgcgtgcgc gatcagctgt tggaaatcgg
     4321 cagccagcag ttggctttta accatcagga agcaaagcaa ttttttgacc gtcgtctttc
     4381 gtcgcccatt gaagccgctg agagcagccg catgtgcgat gatgtggccg gttgggccac
     4441 tgcgctacag ttgatcgccc tctccgcgcg ccagaaccat acctctgcgc atcactccgc
     4501 ccgccgtctt gccgggatta atgccagcca cctttctgat tatctggtgg acgaagtact
     4561 ggataacgtg gatgtcagca cccgacattt cttacttaaa agcgcgatct tacgctcaat
     4621 gaatgacgcg ttgatcgtgc gcgtgaccgg cgaagaaaac ggccagatgc ggctggagga
     4681 gattgagcgc caggggttat tcctgcaacg catggacgac acgggcgaat ggtttagcta
     4741 tcacccgttg tttggtagct ttctgcgcca gcgttgccag tgggaactgg cggcggaact
     4801 gccggagatc caccgtgcgg ccgcggaaag ctggatggaa cagggttttc ccagcgaagc
     4861 tatacatcat gcgctggcgg cgggtgacgc gcaaatgctg cgcgatatcc tgcttaacca
     4921 tgcgtggggg ctgtttaatc acagtgaact ggcgctgctg gaagagtcat taaaagcgct
     4981 gccgtgggaa agcctgctgg aaaatccgcg gctggtgttg ttacaggcct ggctgatgca
     5041 aagccaacac cgctacagcg aagtgaatac gctgctggcg cgcgccgagc aagagatcaa
     5101 aggggtcatg gacggcacgc tgcatgctga atttaacgcg ctgcgcgccc aggtcgccat
     5161 caacgacggc aatccggaag aggcagagcg gctggcgaaa ctggcgctgg atgagcttcc
     5221 tctcgcctgg ttttatagcc gcattgtcgc gacctccgtt cacggcgaag tgctgcactg
     5281 taaaggcaat ctcagccagt ctttatcgct gatgcagcaa accgaacaaa tggcgcgcca
     5341 tcatgacgtc tggcattacg cgctgtggag cttaattcaa caaagcgaaa ttcagttcgc
     5401 ccagggattc ctgcaggccg catgggaaac gcaggagaga gccttccagt tgatcaaaga
     5461 gcaacatctg gaacaactgc cgatgcatga gtttctggta cgtatccgcg cgcaattgct
     5521 gtgggcgtgg gcgcgccttg acgaagcgga agcctcggcg cgcagcggta tcgctgtgct
     5581 gtccaccttc cagccgcaac aacagttgca gtgcctgacg ttactggtgc agtgctcgct
     5641 ggcgcgcggc gatctggata atgcccgtag tcagcttaac cgactggaaa aattattagg
     5701 caatggtcgt tatcactgcg actggatctc taacgccgat aaggtgcgtg tcatttactg
     5761 gcagttaacc ggcgacaaga aatccgccgc caactggtta cgccatacgc caaaaccggc
     5821 gtttgccaat aaccattttc tgcaaggcca gtggcgcaat atcgcccgcg cgcagatcct
     5881 gctgggcgaa ttcgagcctg cggaaatcgt gctggaagag ttaaatgaga atgcccgtag
     5941 cctgcgctta atgagcgatt taaaccgcaa tctgctgtta ctcaatcagc tttactggca
     6001 atccgggcgg aaaaacgacg cccagcgcgt attgcttgat gccttacagc tcgccaaccg
     6061 caccggattt atcagccatt ttgtgattga aggagaagcc atggcgcaac aattgcgtca
     6121 gcttatccag ctcaatacgc tgccggagat ggagcagcat cgcgcgcagc gcatcctgcg
     6181 atatattaac caacatcacc ggcataaatt cgcccatttt gacgaaggct tcgtcgagcg
     6241 tctgcttaac catccggatg tcccggagct tattcgcacc agcccgctca cccagcgtga
     6301 atggcaggtg ttaggactta tctattccgg ttacagcaac gaacagattg ccggcgaact
     6361 ggcggtggcc gcgaccacca ttaagacgca tatccgcaac ctctaccaga aactcggcgt
     6421 cgcgcaccgt caggacgcgg tacagcacgc gcagcagttg ctgaagatga tggggtatgg
     6481 ggtttaacgt gtgcctgatg gcgcttcgct tatcaggcct accatcgcgc gcagagtgta
     6541 ggcctgataa gacagtcttt ttagcacagc tctaattgaa tatggtggtc ggcaatcacc
     6601 tgcatcacgc ccggcggtgg tagggtatcg gtgtagaccg catcgaccat actaatgctg
     6661 cccatgttta ccatcgcgtt acggccaaat ttagagtgat ccaccaccag catcacgtgg
     6721 cgcgaatttt cgataatcgc gcgcttggtg cgtacctcat ggtagtcaaa ttccagcaat
     6781 gagccgtcgc tatcaatacc gctaataccg agaatgccga aatcgagacg gaactgggcg
     6841 ataaagtcct gcgtcgcttc gccaataatg ccgccgtcgc ggctacggag ttcgccgccg
     6901 gcgaggataa tacgaaaatc ctctttcgcc attagcgtgt tcgctacgtt caaattgttg
     6961 gtcacgatcc gcaaattact gtgccctaac agggtgtgcg ctacggcttc cggcgtcgtg
     7021 ccgatatcaa taaacagcgt tgaaccattg gggatctggg ccgcgacttt gcgagcgatg
     7081 cgctcttttt cttccgtttg cgtcgcctta cgatcgtgcc acggcgtgtt caccgagctg
     7141 gagggcaacg ccgcgccgcc gtggtggcgc aaaatcatat tctgttccgc cagatcgtta
     7201 agatcccgac gaatggtttg cgggctgaca gaaaaatgct ccaccagctc ttccgtactg
     7261 acgtacccct gttttttcac cagttcaatg atcgcgtcat gccgttgtgt ttgtttcatg
     7321 aataatctct gaaagtaacc aaccttgcgc cggatagcgg catcgcccta cccggcctgg
     7381 aaaaatatct cgaccacagg ccggatacgc ctcacgttcg ttttcgcgca ttcagcgtat
     7441 caacaaaggc catcgctaaa ccgacgataa gcccggcgat gtgcgcgccg ttcgccatag
     7501 acatgccaaa ccagtcaaac caaccagcaa ctatccacaa taatgcaaaa ataattaagc
     7561 cgcgctggag gtaaattccg ctttgcggat cgcgctctcc gcgcagccac acgtacccca
     7621 tcagcgcata gacgacgccg gacagcccgc caaaccacgg gccgctaaat ttctgctgta
     7681 catagccgct tagcagcgcg cttatcaccg taatgacgat taatttaccg ctgcccaggc
     7741 gcttctctac cgccccgccg agataccacc accacagcag gttaaaaaga atatgcatca
     7801 gtgagaagtg cataaagata tgggtgaagt agcgccagac ttcaaatttt aaaaccggat
     7861 cgaacggcca cgccagccac accatcaccg tctgatcgcc gatgagactc atcgcgatat
     7921 agaccaccac gcaggcgagc atcacgatcc aggtaacagg gccggctcgt tcacgcagcg
     7981 tggcgagaaa gggaaaacgg cggtagcgta gcccgctgtt agtctgcccg gactgccagc
     8041 tagccgccag ataacgcgga tcgccgggat tttctataaa ccgcgccagc tcgacccgca
     8101 cacgttcggc ctgcgattca tccgccagcc agatatcgct ttgattatgt tgctgaatag
     8161 taagaatgac gccctgggtg gccatgtaat caacaaatgc ctgcgccacg cgaggattcg
     8221 caaaggaagt aatcatcaac attattgctg tcgcttagtc catacaaaag aagacagtat
     8281 atataccctt ctcgtcggag gctgcatctt tatgggatta cgcgccattc gcgacatcgg
     8341 cagggaaacg gcgatgccag gcctcaaacc cgccgtcaat gctgtaaacc gcatcatagc
     8401 cttgctggag cagatactgc gcggcgcctt tactactgtt gccgtgatag cacattacca
     8461 tcacggcggt atcgaaacca tgctcacgca taaacgcgcc cagcgtatcg ttagtcaagt
     8521 gaaacgcctg cggcgcatga cccatggcat aactttgcgg atcgcgaata tcgaccagca
     8581 ccgccgcgcc ctggtgcagt ttctgatacg cctcttctac agtgatacat tcaaattgtt
     8641 ccatgaatcg ctctttcatt attgccggtg aagccaatta aggcatttta tcgcccagtg
     8701 tacgttgacg gagtagctta acgccataat gttatacata tcactctaaa atgttttttc
     8761 gatgttacca atagcgcgtt tctttgctat tatgttcgat aacgaacatt tttgaacttt
     8821 aacgaaagtg caagagggca gcatggaaac caaagatctg atcgtgatag gcgggggcat
     8881 taacggtgca ggcatcgcgg ctgatgccgc cggacgcggt ttgtccgtac tcatgctgga
     8941 agcgcaggat ttggcctgcg caacctcttc cgccagttcg aaacttatcc acggcggctt
     9001 acgctacctt gaacactacg agttccgtct ggtcagcgaa gcgctggccg aacgtgaagt
     9061 gctgttgaaa atggcgccgc acatcgcctt cccgatgcgt tttcgtctgc cgcaccgccc
     9121 gcacttacgt ccagcctgga tgatccgtat cggtctgttt atgtacgatc acctcggcaa
     9181 acgtaccagt ttacccggtt ccaccggtgt gcggtttggc gcagattcgg tactcaaacc
     9241 tgaaatcgtg cgcggattcg aatactccga ctgctgggta gacgatgcgc gtctggtact
     9301 ggccaacgca cagatggtgg tgcgtaaagg cggcgaagtc cttacccgta ctcgcgcaac
     9361 cgccgctcgt cgggaaaatg gcctgtggat tgtcgaagcg gaagatatcg acaccggtaa
     9421 aaaatatgtc tggcaggcgc gcggactggt taacgccacc ggcccgtggg tcaaacagtt
     9481 cttcgacgaa gggatgcacc tgccgtcgcc gtatggcatc cgcctgatca aaggcagcca
     9541 tatcgtcgtg ccgcgcgtcc ataatcagaa acaggcgtat attctgcaaa acgaagataa
     9601 gcgtatcgtc tttgtcattc cgtggatgga agagttttcg atcattggca caaccgatgt
     9661 cgaatataaa ggcgatccga aagcggtaaa aattgaagag agcgaaatta attacctgtt
     9721 gaaggtctat aacgcgcact tccagaaaca actggggcgc gatgacatcg tctggacgta
     9781 ctccggtgtc cgtccgctgt gcgatgatga gtccgactcg ccgcaggcga tcactcgcga
     9841 ttataccctt gatatccatg atgaaaacgg caaagcgccg ctgctttccg tgtttggcgg
     9901 taagctcacg acctaccgta agctggccga acatgcgatg gaaaaactgg cgtcttatta
     9961 tccaggcatc gggccggcat ggaccaaaac gtgcgtactg cccggcggcg acatcgacgg
    10021 cagccgcgaa gattacgcgg cgaagctgcg tcgtcgttat ccgttcctga cggaatcgct
    10081 ggcgcgccac tattcgcgca cttacggcag caacacggag tggattctcg gcgaagccac
    10141 gtcactgctt gatttaggcg aagatttcgg tcatgagttt tacgaagcgg aactcaaata
    10201 cttggtggat cacgaatggg tgcgccgtac tgaagacgct atctggcgtc gcaccaaaga
    10261 aggcatgtgg ctgaccgccg agcagcagtc ccgcatcacc cagtggctgg cggcgtatgt
    10321 tgagaaacac caactttcac tggcgtcctg agaaaaatgc cggatggcgg ctaacgtctg
    10381 atccggccta caaggataca taaacgtagg ccgggcaagc gaagcgccgt cggcatcggg
    10441 atttacaacc gcaccggatc aatatgccag atattttcgg catactcttt gatggttctg
    10501 tccgatgaga agtagcccat attggcaatg ttgagcatcg ctttcgtcgt ccactcttcc
    10561 gggcgacgat acaactcatc caccttatcc tggcagtcca cgtagctgcg gtagtccgcc
    10621 agcacctgat agtgatcgcc aaagttaatc agcgaatcta ccagatcgcg gtaacggcct
    10681 ggctcttccg gattaaagac gccgttacca atctgcgtca gtacctgatg tagctcttca
    10741 tctttttcat aatagtcgcg aggcttataa ccctgtctgc gcaacgcttc cacctcttct
    10801 gcagtattac cgaagataaa gatattctcc tcgccgacat gctcctgcat ctctacgttc
    10861 gcgccatcca gcgtaccaat ggtgagcgcg ccgttcaggg caaatttcat attactggtg
    10921 ccggaagctt ctgtccctgc cagcgaaatc tgctcagaca ggtcggcagc gggaatgatc
    10981 acctgcgcca gactgacact gtagttcggg ataaacacta ctttcagctt gtcgccaatc
    11041 tgcggatcgt tgttaatcac tttcgccacg tcgttgatca gatgaatgat atgttttgcc
    11101 atgtaatagg cggaagccgc cttaccggca aaaatattca cccgcggcac ccagtcggcc
    11161 tccggatttt ctttaatgcg gttatagcgg gtaatgacat gcagtacgtt catcaactgc
    11221 cgcttgtatt cgtgaatacg cttaatctgc acgtcgaata acgctttagg gttcaccacc
    11281 acattcagtt gttgcgctat cactaccgcc agccgctttt tattttccag cttcgcctga
    11341 cgcaccgcat gattgaccag cggataatca caatgctgct tcagctcgct gagctgacta
    11401 agatcggtac gccaggtacg accaatattc tcatccagca cgtcagaaag cggcgggttt
    11461 gccagcgcca gccagcggcg cggcgtaacg ccgttcgtga cgttacaaaa acgggtcggg
    11521 aaaatcttcg caaaatccgc gaacagcgac tgcaccatca ggttggaatg gagttcagaa
    11581 acgccgttga ctttatggct gactaccacc gccagccagg ccatccgtac ccggcgaccg
    11641 ttcgactcat caataatcga cgcgcgtcca agcaggctgg tatcgttggg atattgctcc
    11701 tgcaacgttt tcaggaaata gtcgttaatc tcgaagataa tctgcaggtg acggggcaga
    11761 attttcccca gcatatcgac gggccaggtt tccagcgcct cgctcatcaa cgtatggttg
    11821 gtataagaga agacctgaca gcacacctca aacgcgtcgt cccagctaaa tttatgttca
    11881 tcaatcagca ggcgcatcag ctccggaatt gacagcaccg gatgcgtatc attgaggtga
    11941 atggcgattt tatccgccag attctcatag gttttatgca gttgataatg acggtgcagg
    12001 atatcctgta ccgtcgccga gaccagaaaa tactcctggc gcaggcgtag ctcgcgtccg
    12061 gaataggtgg aatcgtccgg gtagagcacc cgtgaaacgt tctcagagtg gtttttatct
    12121 tccaccgccg caaagtagtc gccctggttg aatttaccga ggttgatttc actactggcc
    12181 tgcgcattcc acagccgcag tgtgttagtg gcgtcggtgt cgtaaccggg gatgatctga
    12241 tcatacgcga cggccagaat ctcttccgtc tcaatccagc gcgctttttt accttcctgc
    12301 tgaatgcgcc cgccaaaaag caccttatag cgcgtattgt ggcgcttgaa ctcccacggg
    12361 ttgccatatt ccagccagta atccggagat tctttttgcc gcccgtcgac aatattctgc
    12421 ttaaacatgc cgtagtcgta gcgaatgcca tacccgcgac ccggtaatcc tagcgtcgcc
    12481 agcgagtcca ggaagcaagc cgccagccgt cctaagccgc cgttgccaag ccctgggtca
    12541 ttctcttcat cgatcagctc ttcgagatct aagcccatgg cctccagcgc gcctttaacg
    12601 tcgtcataaa tgcccagcga gagcagcgcg ttagagagag tacgaccaat caaaaactcc
    12661 atcgacaggt aataaacctg ccgggtttcc tgcgataatt gggctcgatt agaacgcagc
    12721 cagcgctcca ccagacgatc gcgcaccgcg aacaacgtgg cgttcagcca ttcgtgttta
    12781 ttggcaatga ccgggtcttt accaatcgta aacatcagct tataggcaat agaatgctta
    12841 agcgcctcaa cgctgagtgt gggcgatgca taagtaaacg gagcattcat ataaatgatt
    12901 cctggatgac tatttcaagc gatagtacag ctcgcggtat gatttcgcgg caacttgcca
    12961 gctaaaatcc atcgccatcg cctgccgttg tacaaaccgc caaagcgaag gccgtgacca
    13021 caacacaaaa gcacgccgaa tcgcgcgtag caacgaccag gcattactgt cttcaaagac
    13081 aaaaccgctg gcgataccgt ccgccagatt ttccagcgaa ctgtcggaga ccgtatcggc
    13141 caaccccccg gtacgccgca ccagaggcag cgtgccatac tttaagccat ataactgcgt
    13201 taagccgcac ggttcgaaac gactgggcac cagaataacg tccgcgccgc ccataatgcg
    13261 atgcgagaaa gcttcgtgat agccgatctg tacgccagcc tgccctgggt gttccgccgc
    13321 cgccgcgagg aacccctcct gaagcaccgg atcgcccgcg ccaagtagcg ccaactggcc
    13381 gccctgctcc agcagccccg gtaacgcctc cagcaccaga tccagacctt tctggttggt
    13441 cagacggctt accacggcga acagcggcac tttgtcgtta accttcaacc ccatcgcaat
    13501 ttgtagctga cgtttgtttt ccgccttctc ttccagggta tcgcgcgtgt agcgcgacgc
    13561 cagcagcaga tcggattccg ggttccagat cttctcatcc acgccgttca gtatgccgga
    13621 caagcgccct tccagatgac gctgacgcaa caggccttcc ataccataag caaactgcgg
    13681 ttcggtaatt tcacgcgcat aggtcgggct caccgccgta atatggtcgg catagtacaa
    13741 accggccttc aaaaaggaga gttgtccgtt gaactccagc ccatgcatat taaagaatga
    13801 ccacggcagc tcgatgtcat ccatatgctt tgcataaaac atgccttgat aggccaggtt
    13861 gtgtacggta aagacc
//
LOCUS       DAGWFR010000109        13670 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.111, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000109 DAGWFR010000000
VERSION     DAGWFR010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 13670)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13670)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13670
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.111"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..538
                     /locus_tag="MOX77_003126"
     CDS             <1..538
                     /locus_tag="MOX77_003126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AbrB family transcriptional regulator"
                     /protein_id="HCA3358585.1"
                     /translation="QQVVWFPPLSGNLLTTLLLAIVAGIAGRLMRIPSGTMLLPMLAG
                     ALLHSQGIIEIELPEWLLAVAYMAIGWRIGLGFDRQVFFMALRPLPQILLSIFALMAI
                     CAAMAWGMAYYMQIDFMTAYLATSPGGLDTVAAIAAGSSADMALIMAMQTLRLFSILL
                     TGPAVARFISTYAPKQPL"
     gene            complement(593..1384)
                     /gene="nei"
                     /locus_tag="MOX77_003127"
     CDS             complement(593..1384)
                     /gene="nei"
                     /locus_tag="MOX77_003127"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease VIII"
                     /protein_id="HCA3358586.1"
                     /translation="MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLKPYESQLTGQL
                     VTRIETRGKALLTHFSNGLTLYSHNQLYGVWRVIDTGEIPQTTRILRVRLQTADKIIL
                     LYSASDIEMLTAEQLMTHPFLQRVGPDVLDARLTPEEVKARLLSPRFRNRQFSGLLLD
                     QSFLAGLGNYLRVEILWQVGLTGQHKAKDLNEAQLNALSHALLDIPRLSYTTRGQADE
                     NKHHGALFRFKVFHRDGEACERCGGIIEKTTLSSRPFYWCAHCQK"
     gene            complement(1418..1570)
                     /locus_tag="MOX77_003128"
     CDS             complement(1418..1570)
                     /locus_tag="MOX77_003128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001528779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358587.1"
                     /translation="MPWRDHVNPDGEVVSCCDNVIITGYHRLFVHPLWIFIMAFDVHS
                     RQSEAG"
     gene            complement(1638..3060)
                     /locus_tag="MOX77_003129"
                     /pseudo
     CDS             complement(1638..3060)
                     /locus_tag="MOX77_003129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459711.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl transferase"
     gene            complement(3118..3951)
                     /locus_tag="MOX77_003130"
     CDS             complement(3118..3951)
                     /locus_tag="MOX77_003130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HCA3358588.1"
                     /translation="MEKSLLVIVRHKPGRTRLLMRALQSINDQTFKKINIIIFCMEEE
                     LKCHNVDDFYLKELSNIYSVIYDENCIFNAIKMSESNYLCFMDDDDSWAPEYVSRLLS
                     VLANIQSTYSSVNAIACHTNKVAEIAENNRIIINSTQPWNHYLNAGPVSFDVIYYRNS
                     IPLSSCLFDKNSVIDVIESHKLSSPAFFWPFFIHYLAENDVWILPEALAFYHFRENDD
                     FEFGNYTVINNELFDIECKIAENKMMRSIDDSSLLNVLLSNIANNSLFHKISYIENKI
                     K"
     gene            complement(4144..5917)
                     /locus_tag="MOX77_003131"
                     /pseudo
     CDS             complement(4144..5917)
                     /locus_tag="MOX77_003131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459709.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
     gene            complement(6011..6721)
                     /locus_tag="MOX77_003132"
     CDS             complement(6011..6721)
                     /locus_tag="MOX77_003132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCA3358589.1"
                     /translation="MKISCKNVGVILPIFNSSHRSFKKTFLQAASGGRIGSSNTGIIE
                     VEALKKIDFTLTEGNRLALIGHNGSGKTTLLRVLAGAYKPTSGKYECIGRVTSLIDPM
                     MGMDGELTGLENIKLRGLFLGLSKNEIKNITEDVIEFSELGDFIKIPVRTYSSGMVLR
                     LGFSISTAINPEILLMDEWMSVGDSDFKRKAEMRLNSFISKAGIMVMATHDDELAKSV
                     CNKFIRLEHSEIVSKGGF"
     gene            complement(6725..7494)
                     /locus_tag="MOX77_003133"
                     /pseudo
     CDS             complement(6725..7494)
                     /locus_tag="MOX77_003133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459707.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
     gene            complement(7623..8756)
                     /locus_tag="MOX77_003134"
     CDS             complement(7623..8756)
                     /locus_tag="MOX77_003134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HCA3358590.1"
                     /translation="MKRLCYFVNSDWYFDLHWTERAIAARDAGYEIHIISHFIGEEII
                     KKFKTLGFICHNVSLVAQSFNMFVFFRAFLNARKIIKEINPDLLHCITLKPCLIGGVS
                     ARRSNSPVVISFVGLGRIFLYNTVPMRILRALTVLVYKYIAGNKRGVFIFEHDKDRRK
                     ISRLVGIDYHKTIVIEGAGINPDIYKFSIEKKHEIPIVLFASRMLWSKGLGDLIEAKK
                     ILRQKNIHFVLNVAGILAEDDKDAIPLELIHHWHNEGLINWLGRSSNVYELIQKSNIV
                     ALPSIYPEGVPRLLLEASSVGRACIAYDTGGCDSLIIHNYNGLIVKSNSAQELAVELE
                     YLLKNPQIRLEMGANGRKRVKELFSSILVINKTLQIYKDTIGC"
     gene            complement(8769..9665)
                     /locus_tag="MOX77_003135"
     CDS             complement(8769..9665)
                     /locus_tag="MOX77_003135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HCA3358591.1"
                     /translation="MMKCTALIVTFNRLEKLKKSVRETVKAGFSSIVIVNNGSSDGTR
                     EWLSSLSEPGITILNLKDNLGGAGGFKVGSQYICSYSNADWVFFYDDDAYPEINILKH
                     FSLLDTSSYRIFASRVQDTYGRSCRMNLPFIRVPSTVFETIYYAMRPERFSPVRTQVT
                     DVQTVSFVGMIIDRKVLNNHLNDIYDELFLYYDDFFFGYKLVLSGQKIRYSPEIKFIH
                     DISIHGRCICPEWKVYYLCRNLLLLRKLLPVPRIFSVLSIVLRLSKYLAILPWQRKKF
                     RYLYFIWQGILHGLKGISGKYH"
     gene            complement(9662..10812)
                     /gene="glf"
                     /locus_tag="MOX77_003136"
                     /pseudo
     CDS             complement(9662..10812)
                     /gene="glf"
                     /locus_tag="MOX77_003136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459704.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-galactopyranose mutase"
     gene            complement(11098..11838)
                     /locus_tag="MOX77_003137"
     CDS             complement(11098..11838)
                     /locus_tag="MOX77_003137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transport protein"
                     /protein_id="HCA3358592.1"
                     /translation="MQTLTRVLPPLRLIMFCQSGENPTQFPDTGGLCVEDCVRLRTPE
                     GLLDRLRRWPGAMVISAGRPSTQLLLWQQVFLRYPRTVVFCSSNAFLPVDVSVEGYFR
                     HLRLIKRAMSVRVLARMAELAIWSSLQTSPYEEEMKSALSVPELVMEINSRTLVRLLS
                     ERLPKQGRRVLGLLLSGCSPEMTARMLGTGVRQVWLAEQTLKQRWDIPTGVPLSDAVR
                     IRIPDVGPDISQQSGLVKTGAGNAPDLC"
     gene            complement(11840..12175)
                     /locus_tag="MOX77_003138"
     CDS             complement(11840..12175)
                     /locus_tag="MOX77_003138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358593.1"
                     /translation="MQPKSRTGQGVREQCLDGARRHFSYRHGMAPGPRKGADMLFPQH
                     EAAVAGAVPGRQWPEENNLMTQEYAEMSTGRGGTSKCRYSMGAKIFLLLLAVSTVAAL
                     FSLYQVLTY"
     gene            complement(12353..12919)
                     /locus_tag="MOX77_003139"
     CDS             complement(12353..12919)
                     /locus_tag="MOX77_003139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HCA3358594.1"
                     /translation="MKRKYLTQEEIEKLLSATDRMPFPERNRCLILMAFIHGFRASEL
                     LGLRLSDIDLAGRQLYIRRLKNGFSTCHPLLPDEYNVLKSWLRARKYLEKGADGDWLF
                     LSLRRHPLSRQQFFYILREAGRLAELTIAPHPHMLRHACGYALADKGIDTRLIQDYLG
                     HRNIQHTVRYTASNAGRFHGIWRKKRRV"
     gene            complement(12979..13110)
                     /locus_tag="MOX77_003140"
     CDS             complement(12979..13110)
                     /locus_tag="MOX77_003140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358595.1"
                     /translation="MTTYQEIEARLIRCFTITSWIACQIASYMDFKLFTHSNFFSEN"
     gene            complement(13434..>13670)
                     /locus_tag="MOX77_003141"
     CDS             complement(13434..>13670)
                     /locus_tag="MOX77_003141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LamB/YcsF family protein"
                     /protein_id="HCA3358596.1"
                     /translation="ADGSLVPRMQPGALIHDEEQALAQTLDMVQAGRVKSVTGVWTTV
                     TAQTVCIHGDGEYALAFARRLRAAFNARNVHVIA"
BASE COUNT         4139 a         2995 c         2503 g         4033 t
ORIGIN      
        1 ccaacaggtg gtctggtttc cgccgcttag cggtaattta ttgacgacgc tgctattagc
       61 gatcgtggcg ggcattgccg gtcgcctgat gcgtatccct tccggcacga tgctgctccc
      121 catgttggca ggcgcgcttc tccattcgca aggcatcatt gaaattgaat tacccgaatg
      181 gctgctggcc gtggcgtata tggcgatagg ctggcgtatt gggctgggtt ttgacagaca
      241 ggtgtttttt atggcgctgc ggccattgcc gcaaatctta ttgtcaattt tcgcgctgat
      301 ggcgatttgc gccgcgatgg cgtggggaat ggcttactac atgcagattg attttatgac
      361 ggcttatctc gccaccagtc ccgggggtct ggatacggtt gccgcgatcg cggcaggaag
      421 cagtgccgat atggcgctca tcatggcaat gcaaacccta cggctgttca gcattctgtt
      481 aactgggcca gcagtggccc gttttatatc aacctatgcg cccaaacaac ctttgtaggg
      541 ctgataagcg tcgcgccatc agacaatagc cgctcgccga tggcggttcc ggctatttct
      601 ggcaatgcgc gcaccagtaa aacgggcgtg aggaaagtgt tgtcttttca ataatgccgc
      661 cgcaccgctc gcacgcttca ccgtcacggt ggaaaacctt aaagcgaaac agtgcgccat
      721 gatgcttgtt ctcatccgcc tgaccgcgag tcgtgtagga aaggcgcgga atatccaaca
      781 gcgcgtgaga aagcgcattc agttgcgcct cgttgagatc tttcgcttta tgctgtccgg
      841 ttaatcctac ctgccagagg atttcaacgc gcagataatt ccccagtccc gccagaaagg
      901 actgatccag caacagcccg gaaaattgtc ggttgcgaaa acgcggcgac agcaatcgag
      961 ctttaacctc ttccggagta agacgcgcgt ccaacacatc cggaccgact cgctgtaaaa
     1021 aagggtgcgt catgagctgc tctgctgtca gcatttcgat atcagacgcg ctataaagca
     1081 gaataatttt atccgccgtt tgtagcctga cgcgtaatat acgcgtggtc tgcggtattt
     1141 caccggtgtc gatcacccgc catacgccat agagttggtt gtggctgtag agcgtcaggc
     1201 catttgaaaa gtgggtcaat aacgcttttc cccgcgtctc tatccgggta acaagttgac
     1261 cggtaagctg cgattcatac ggttttaact gtgcaaaggc aaaccagaca tcggttaagg
     1321 gtttgccttt gattgccgcc tccagattat ccgccgcacg acgaatttcc gggccttcag
     1381 gcatgataat atcctttgtt aacagttgat taatggacta ccccgcctct gactgtctgg
     1441 aatgcacatc gaacgccata atgaatatcc acagcggatg gacaaacagg cggtggtatc
     1501 cagtgataat aacattatcg cagcacgaga ccacttcccc gtcagggtta acgtgatcgc
     1561 gccagggcat aatcgactca gcccttgtcg ggcgagcgcc taataatgat tgtctgccta
     1621 ccgaaattaa atgacgctta gttatatttt gcccaaaatt tttttctgtt gagcctttta
     1681 aagccttctt tccaataact ggcattcaac tctttgatat aattttctcc gggaaaaagt
     1741 ttatccttta aaggcagttt tttggctagc acgattcttt ctgcgttaga tcccgcggac
     1801 tctgaatgtg tgagggaaga taaggcgtcc agttgagcgc ttgagggtct ggctatcaat
     1861 tcaaaaaaag gttctgacaa tacaacacta ctaagtgctg cataatttcc tttttgtatg
     1921 agcggtttga cgtactcaaa aaaagaaata atccctgatt gcaatcttgc cgcttttttt
     1981 aaatactcaa tttcagaacc actgctatct tcacgtacag gaattattcc attatccgtt
     2041 tttttatagc caattgttga cccagtatta tcagccatag cgaactccat tatttccacc
     2101 cctcctgata agaaaagatc acacttatcg tggggatggc catagttggt tagataacca
     2161 aacatcttat tataaataga tcggttatca ttggcgccag caaaagttgc caaataaaac
     2221 ccatgtattt gtttttctgc ccattgcgca cctaaagaac gagcaaatac tgattgaata
     2281 ttacccatcc atcctacatc gataagtgct atatttttaa aaccttcaca ggccgtttta
     2341 aagtagatgg aaagcagaca cttgtttaag taataaagac ttacaaatag attcacccat
     2401 aatatcttta gctttccaat gattagatat cccatgatta tactctgacc aatcagcatg
     2461 gagagtattt atgccgagtt ttttagcatt cagaatatca gcatgaacat tatcgccaac
     2521 atgtatccac gatgcaatat ctacattttc atttttcttg actattgaaa ataatttacc
     2581 actattttta gagtaccgct cttcgccaga tgaataaact ggaatgttac tgatatcata
     2641 gccacatgat gttaacaact cctttaatat tgctgatgga aggtacatat cactaattaa
     2701 aatgactttg caaccatcac taatagcctt ttcaaacaaa cagcttccac gcgcattttt
     2761 atataaaaca atcttctcca tttgtatttc cagatcgatt atctttttta ctgtcgctgg
     2821 tgaaagctgc ggatgctttt ttaaaatttc atcgtatatt tcagatataa gtatttccgg
     2881 ctcgccgcca aaacgcctga ccctattctc tctggcactt acttccgcct gaactcttat
     2941 ctctgggaaa ttatcaataa taccaatctc gtacgctgat ataaaaaatt tctcagttgc
     3001 taaagttgat tgcattaatg aaaacaaatc tctgggacgg taaatcctcc ggctaaccaa
     3061 tgtatcaaag atatcaaagc ttacggtctt gtatttttta aagttcatat ccatatttta
     3121 tttaatctta ttttcaatat aagaaatttt atgaaaaaga ctattgttag caatatttga
     3181 aagtaacaca ttgagcaatg atgagtcatc aatacttctc atcattttat tttctgcaat
     3241 tttgcactct atatcaaata actcattgtt aattacggta taattgccaa attcaaagtc
     3301 atcattttct ctgaaatgat aaaatgccag tgcttcaggt aagatccaaa catcattttc
     3361 tgccagataa tgaataaaaa aaggccagaa aaatgcagga gaggataatt tatgactttc
     3421 aatcacatcg ataacagaat ttttatcgaa taaacacgag gatagtggaa tagaattcct
     3481 gtaataaata acatcaaaac taacagggcc agcatttaaa tagtggttcc atggttgcgt
     3541 tgaatttata attattctat tattttccgc aatctcagca actttatttg tatggcatgc
     3601 tattgcattt acagatgaat acgttgactg tatattcgcc aaaacactga gtagccttga
     3661 cacatattca ggggcccagg aatcgtcatc atccataaag cataaataat tagattcaga
     3721 catcttaata gcattaaaga tacagttttc gtcgtagata acactatata tatttgacag
     3781 ttctttcaga taaaaatcat ccacattgtg acatttcaat tcttcctcca tgcagaaaat
     3841 gataatattt atttttttga acgtctggtc attaatggat tgcaaggccc gcattaatag
     3901 acgagtacgc ccaggtttat gtcggacaat aactaaaaga ctcttttcca tattctgatt
     3961 tcgcgtttta cggtatatat aaaaattaac accctatgaa tgaatgctga cattgggtaa
     4021 ggattataat attttattag actgacacca gataaggtgt agcaacagaa ccatacctaa
     4081 gattatcata gtcatataat taaaaaatcg gtataattct catcaacacc acttacatca
     4141 tgtttaatat ttatcttcag attttttatt gaatttttta taccaaaaga gctttgaggt
     4201 aagatagggc aaactatttt tcatctcttt ttttgcagat ttaaaccgat aaaaattttt
     4261 gactgccgta aacaaaccat taataataac tttaaaaaac tccatttttg agtgggtaag
     4321 ttttaataat ttgccatttt ctatatttaa atgatagata gtaattctcc ggaatgaaaa
     4381 cttagtaggg tgataatgac gataatcaac caggattggt tttttaatta aaaagaaagc
     4441 tggaattaag tgtccattaa gggttatgca tctaaaaaat ttgtagatgg ctttttcttt
     4501 accagaacat gggtaatcaa cacaaccatt aacaatatca ataccttcta cattgaattt
     4561 ttcattatga gttattgcat taattctttt tcttatctcc agaagatcta cattatcttc
     4621 ccaaaactcc cgtccagaaa gacaatcgtt atatgacata atcattgctc tggcaagttc
     4681 atagcggcat gaaaaactcg caagaaagac ttcccgcaca aagaaaacac ttaacagtag
     4741 tgcagcaaac tttcttttac taattaatgc aggtacagca acagtcctga agttcaaata
     4801 gctatttaga accgatattt ttctttcaaa atccatttgc cacgaagcca caccattaag
     4861 tgtgacaata ttatgttttt tatgcatata tccaaatagc aggtcatcac cacgaacaaa
     4921 gaaaggaaat gagtaatatt caatagcgtt aatattaaag gcaaaaaacc accatccacc
     4981 gtagcctatt tttctttcat tatcaaaagt atctaaagaa tctatttccc gagcatccag
     5041 ataatgttta tccgggtaat gtaaaaaatc tctatgccat atggcaccag attcatgtat
     5101 gattgccggg ttatcttcaa aaagcataca gccagtaaca actgtatttt tgtctttagc
     5161 catcagtaaa aaagcatgag ttcgacaaat cgattcaatt tcacatgagc cgtcgtcatc
     5221 cataaatatg acatgtttga catcgttgat tttccctgcc tctatcaaac ctctcataaa
     5281 cccgcctgac ccaccgaggt tttcattatt gataactata atgccgtttc ctgacgggtg
     5341 attaatcgcc tcgccattat taacgacaat caatttaaaa cgatctttaa attcgctctg
     5401 ggttaagagt gttttattaa ttaacagctt cttttctatt ataagttgtt ataactaaag
     5461 ccatagatga tttactaaca tgatctttag tcagaaatta aaatccattt aaaacagagt
     5521 cttcgtctga ttgccactcc acatagatat atccaaaatt tatttttgat atatcaatct
     5581 caatctcaat ctcaatctca tcactaatat tacatgacga tttaaaatca atttgcttta
     5641 atactctaat gacacgattc tctttatgcc ttacagttat agttccgcga ccaattatat
     5701 taacccgcaa aaaaagtgat gttaaggttg tatatttttt ccatttctta attgagaatg
     5761 cattaaaaaa agtatcaaaa tatgcaacct tatgacgcgg aacaagtaag ttacgtgagg
     5821 tatagttata cttcccgccc tgagttctga aataaagctg ctcttccgtg catagatcaa
     5881 tgtttggtaa aattactttt tgaagtaaaa aatacataac gaacctataa atttatatta
     5941 tctggggtaa cgctattata aaatagtaaa tttctcaccg cgtagtgata taaatactgc
     6001 aataagaata ttaaaatcca cctttgctaa ctatctcact gtgctcaagc ctgatgaact
     6061 tattacatac agatttagcc agttcatcat catgagtggc cattaccata atgcccgctt
     6121 tagagataaa gctatttaat ctcatctctg cttttctttt aaaatcacta tcacccacgc
     6181 tcatccattc atccatcagt aaaatttcag gattaattgc agtagaaata gaaaaaccaa
     6241 gcctcagaac cataccacta gaatacgttc taacggggat tttaataaaa tcacctaact
     6301 cgctgaactc gatgacatct tctgtaatat tttttatttc attttttgac agaccgagaa
     6361 atagtcccct cagttttata ttttccaggc cggtaagctc accatccatt cccatcatgg
     6421 gatcaatgag gctggtgact cgaccaatac attcatactt ccctgaagtt ggtttatagg
     6481 cccctgcaag tactctcaga agagttgttt tgcccgaacc attgtgtccg ataagcgcaa
     6541 gacggttacc ttcggtaagc gtaaaatcaa ttttttttaa tgcctctact tcaataatcc
     6601 cggtattcga tgagccaatt cgtccacctg aagcagcctg taaaaaagtt tttttaaatg
     6661 aacggtggct ggagttaaat atagggagta ttacgccaac gtttttgcaa gagattttca
     6721 ttaattataa ccagtatacg attcttgagc gatatttagt caacactaag gttgagacca
     6781 tcaacataat aatagaggtt attattgtgt aaaaccatat agttacatct ggtacagttc
     6841 ccattaatgg tttcctgagc atctccataa agtaataaaa aatattataa tcaacaaatt
     6901 cctttcttcc ctttggtaat tgttccgatg ttcaaatgat gggagttata aaaaaacaca
     6961 acgttactac actttgaaca accggtccca tatcacgata tcttgtgcaa aaaatggcga
     7021 gaatcatacc tgtagaaatt aatgagatgg atgttattat aattgcaggt ataaaaagga
     7081 gaatatcaag atttaccgat gtattggtaa aaaaatcacg aaaggtataa tgataaaatt
     7141 atgcaacata atcataaact gccgatagaa aacacgtaat atatataaat atagcggaag
     7201 gtcagactgt ttaataattg atgcggactc attaaatatt ccacatgatt cattaatagt
     7261 tgctgataga aaggcccaaa agatcatacc taaagtaaga tgcatgataa aattttcgga
     7321 accagaactg aacagcgaac cgtaaagagg tcccattgct gatatggtga ctcccatcga
     7381 aatcgttatc caaaaaggcc ctaacaccga tcgccggtat cgtcccagga catcattcca
     7441 acctagcgaa atccaaagtt ggtgcttggc cagagcttct ttcaaatcat tcattgtttc
     7501 cgtgtcacct ttacctgaag aacttattct ttaacgatat gaaaatataa cttatttatt
     7561 ttctataata tttacatact atttatctaa acactgacct acttcataag cattttatgg
     7621 tgttagcaac caatagtgtc tttataaatt tgcaatgtct tattaatgac taatatgctg
     7681 gaaaacaatt cctttacacg ttttcttcca ttcgccccca tctctaagcg aatctgtgga
     7741 ttttttaaca aatactctaa ttctaccgct aactcctgag ctgaattact tttcacgatc
     7801 aacccattat agttatgaat aattaagcta tcacatccgc cggtatcata agcaatacat
     7861 gcacgtccta cagatgatgc ctctaataaa agccgtggta ctccttccgg ataaatagat
     7921 ggcaatgcaa cgatattcga tttctgaata agctcatata cattcgaaga gcgtcccagc
     7981 cagttaatta gtccttcatt atgccagtga tgaatgagct ccaaagggat agcatcttta
     8041 tcgtcctcgg ccaatatacc tgcaacattt aaaacaaaat gaatattttt ttgtctgagg
     8101 atcttttttg cttcaatgag atcgccaaga cctttactcc ataacattcg gcttgcaaaa
     8161 aggactatcg gtatctcatg ttttttctct atagagaatt tataaatatc cgggttaatt
     8221 ccagcacctt cgataacgat agttttatga taatcaatac ctactaaacg cgatattttt
     8281 cgtcgatctt tatcatgttc aaaaataaaa acaccacgct tattaccggc aatatatttg
     8341 taaaccaaaa cggttaacgc acgcaatatt ctcattggca cggtattata taaaaagatt
     8401 cgaccaagtc cgacaaagct gataacaact ggactattac ttcttctggc gctaactcca
     8461 ccaatcaggc aaggtttgag cgtaatacaa tgcaataagt caggattaat ctccttaata
     8521 attttccgag cgttaaggaa tgctctaaaa aaaacaaaca tattaaatga ctgagcaaca
     8581 agagacacat tgtgacaaat aaaaccaagc gttttgaatt tttttataat ctcttcacca
     8641 ataaaatgac ttatgatatg aatttcataa cccgcatccc ttgccgctat cgcacgttct
     8701 gtccagtgta aatcaaagta ccagtctgaa ttcacaaaat aacataacct tttcatctct
     8761 tcgtcctgct aatgatattt cccactaata cctttaagtc catgaagtat tccctgccag
     8821 ataaaatata gataacgaaa tttcttacgc tgccatggta atatggcgag atatttagag
     8881 aggcgtaata ctatagaaag aacactgaat atcctgggaa cgggtaaaag ttttctcagc
     8941 agcaacaaat ttctacaaag ataatatact ttccattcgg ggcagataca ccttccatga
     9001 atagagatat catgaataaa tttaatttct ggggagtaac gaattttctg cccggacaat
     9061 actagcttat aaccaaagaa aaaatcatca taataaagga aaagttcatc atagatatcg
     9121 ttaagatggt tattcaatac ctttcgatca ataatcatac caacgaatga cacagtttga
     9181 acatcagtaa cctgagttct tactggagaa aacctctctg ggcgcatcgc ataataaata
     9241 gtctcaaaca ccgtagatgg gaccctaatg aaaggcaaat tcatccgaca agaccgccca
     9301 taggtgtcct gaactcgcga cgcaaatata cggtaacttg atgtatctaa taacgagaaa
     9361 tgctttaaaa tattaatttc cgggtaagca tcatcatcat aaaaaaatac ccaatcggca
     9421 ttactatatg agcatatata ttgactacct actttaaatc cgccagcacc accaagatta
     9481 tctttaagat taagtatcgt gatgccaggt tcacttaatg aagaaagcca ttccctggta
     9541 ccgtcgcttg agccattatt aacgataaca atagaggaaa aacccgcctt aacagtctct
     9601 cgcacacttt tttttaattt ttcaagacga ttaaaagtta cgattagcgc tgtacacttc
     9661 atcaaacggt aactgtaaaa gctggcattt ctttttgttc atatagcgac gttaagtata
     9721 cgtccgccgt ctgtaatgct tcagctatcg tgatgtccat atcgagataa cgataagtgc
     9781 caagacgacc aatgaaagta atattttttc ttttttagcc cgcgacagat atttattcag
     9841 taaatccatt ttatctgccc tgcgaacagg atagtagggt atatcaccag cttcacattc
     9901 ccgactatat tcttgataac atattgaagc ttcatgtctc tcccacggag aaaaatattt
     9961 gtgctcagta atccgagtat aaggagtatc tattgaacaa taattcatta ctgcgcatcc
    10021 ttgataatca ctctggcaaa ttattttttt aaagtctaat gtacgatatt ccagtcggcc
    10081 atattgacag gagtaaaagg catccagcgc gccactgaaa aaaacatgat cataatttgt
    10141 ccgcatttct tgagtgaagg agcgacatag ttcaacagcg atattttcgt gttcgacaat
    10201 ggacttgacc atttgtgtat aaccaaattt tggtattccc tgaaacttat gattgaaata
    10261 gttatcatca taattaaaac gaacagggat acgtttcaat acagaagcgg gtaacgcgga
    10321 aggatgaagc ccccattgtt taatggtata acctttaaaa aaggcttcat ataactcttt
    10381 accaatgaaa cgcaaggcct gttgctcaaa attttgtggt tccagaatgg tgctatcaca
    10441 tttttgaagc agtaatttcc tggcgtcatc aggtgagcag gcgacaccaa aaaattgatt
    10501 gatggtatga agattgatag gtagagaaaa tacctgacca tttactgtgg ccttaacctt
    10561 attgatataa ggcatcatct cagcgtattt atttacataa ttccatacag tttcattatc
    10621 agtatgaaaa atatgaggac cataaacgta caccataata cccgtgtgct catctcgggc
    10681 atcataagcg ttactaccga tatgcgaacg ttgatcaata atattgacta catgtccctg
    10741 ctcggctaac tggcgtgcta ttactgcgcc tgaaaggccc gcacctacaa ttagtatctt
    10801 tttacgttgc attatttttg tcactctgtt cgcagacaca gataatatta gatagtttat
    10861 ccagaaccat tttcatttat atcagaagag taaagtgaaa tttactcaac gcatccagat
    10921 aattccacgc taccgccaca gcgcgtaaac cctcgcactg attacagatt cattaatgtt
    10981 acacgttatg cggtatttcc ggacaacgat gattgccata tttattttgt gaagataact
    11041 cattcagaac gcaacattat gggtctgaat accgcgcggc atgatgtaaa tatgctgtca
    11101 gcataaatcc ggtgcgttac cggccccagt ttttaccaac ccactctgtt gactgatgtc
    11161 cggaccgacg tccggtatcc ttattcttac cgcatcagat agcggtactc ctgtcgggat
    11221 atcccagcgt tgtttcagcg tctgctccgc gagccagacc tgcctcacgc cggttcccag
    11281 catacgggcc gtcatttccg ggctacagcc tgacaacagt aatcccagca cccgccgtcc
    11341 ctgttttggc agacgctctg acagtaacct gaccagcgtg cggctgttta tctccatcac
    11401 cagctccggc acgctcaacg cgcttttcat ctcctcctcg taaggcgatg tctgtagtga
    11461 tgaccatatg gcaagctcag ccattctggc cagaaccctt accgacatgg cgcgtttaat
    11521 cagcctcaga tggcggaagt aaccttccac gctgacgtca accggtaaaa acgcgttact
    11581 gctgcaaaaa accactgtcc gcggataacg cagaaaaacc tgttgccaca gcagaagctg
    11641 ggttgatggc cgtccggcgg atatcaccat cgcgccgggc caccgacgca accgatccag
    11701 cagcccttct ggtgtcctga gacgaacgca gtcctccacg caaaggccgc cggtatccgg
    11761 aaactgcgta ggattttcgc ctgactgaca aaacataatc agccggagag gcggcagtac
    11821 tctggttaac gtctgcatat cagtacgtca gaacctggta caggctgaac aacgctgcga
    11881 cggtggagac cgccagcagg agcaaaaata tttttgcgcc catactgtac cggcacttac
    11941 tggtcccccc ccttccggtg gacatttccg catattcttg cgtcatcaga ttgttctcct
    12001 ctggccattg ccgacccggc actgcgccag caacggcagc ttcgtgttgt ggaaacaaca
    12061 tgtccgcacc ctttcgtgga ccgggagcca ttccatgtct gtatgaaaaa tgacgtctgg
    12121 ccccatctaa acactgctct ctgacaccct gtccggttct gcttttcggc tgcacaggcc
    12181 gtcagtcccc ctggtagtac atgctcctgc cgtagggtaa ttctgccctg tgcggagtac
    12241 aaaatgacaa atagaaaata cagtaatcta ttgatttata tgttgattat gtaaatcagc
    12301 tttccctgaa cagacttctc tgtgatttaa caatatgaat cagaacgtac ggttatactc
    12361 gacgtttttt tcgccatatt ccatgaaaac gcccggcgtt acttgcggtg tatcttacgg
    12421 tgtgctggat attcctgtgc cccagatagt cctgtatgag tcgtgtatca atccctttat
    12481 cagcaagggc gtagccgcag gcatgtcgca gcatatgagg atgtggcgct atcgttaatt
    12541 cggccaaccg ccctgcctca cgaagtatgt aaaaaaattg ttgcctgctg agcggatgcc
    12601 gtcgtagcga caggaacagc cagtctccgt cagccccttt ctcaagatac ttcctggccc
    12661 tgagccagct tttcagtacg ttatactcat cgggaaggag ggggtgacac gttgaaaagc
    12721 catttttgag gcgccggata taaagctgtc ttcctgcaag atcaatatcc gacaagcgca
    12781 gccccagcag ctcactggcc cggaagccgt gaataaacgc catcaggatt aagcagcggt
    12841 ttctttccgg gaagggcatt ctgtcggtcg ctgacagcag tttttcaatc tcttcttgcg
    12901 taagatattt tcttttcaca aaacaaatcc atcataacaa aatgagtaat atactaaaaa
    12961 atcactgatc agatgagttt aattttcgct aaaaaagttg ctatgcgtaa acagcttaaa
    13021 atccatatag ctggcaatct ggcacgctat ccatgacgtg atagtgaaac agcgaatcaa
    13081 tctggcttca atctcctgat aagttgtcat gacgaggaat ataaatgcta aaaatgaggc
    13141 tatcgtgagg taaatcaatc agaaaggggt aatagagagt caggtagttt acccgccccg
    13201 gaggtttgat tagatggcga tagctaacaa tatcatagtg attttcaaaa actctgctgc
    13261 taacagcaat aagctcatca tactggctat tacagcatca cttggttatt tttaaaataa
    13321 tatattataa ggggatttat atagtattga ataaatccct cttcctgaca ttaagagaac
    13381 agaacacgat aatttttagc agccgtaata taatagcttc aatcgtcggg ctctcaggca
    13441 ataacgtgta cattacgcgc attgaacgcg gcgcgtagcc tgcgtgcgaa tgcaagcgca
    13501 tactcgccgt cgccatgaat gcacaccgtt tgcgccgtga cagtcgtcca cacgccagta
    13561 acgcttttca ctctcccggc ttgtaccata tccagcgttt gcgccagcgc ctgctcttcg
    13621 tcgtgaatca gcgcgccagg ttgcatgcgc ggcaccaggc taccgtcggc
//
LOCUS       DAGWFR010000110        13501 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.112, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000110 DAGWFR010000000
VERSION     DAGWFR010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 13501)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13501)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13501
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.112"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..492)
                     /locus_tag="MOX77_003142"
     CDS             complement(<1..492)
                     /locus_tag="MOX77_003142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HCA3358597.1"
                     /translation="MNNILSEEVLNVTDFTTSRQLTLWKREDLQSSQLDDVAEEVPVA
                     LVYNGISHVVMMASPKDLTHFAMGFSLSEGIIDSPREIYGMDVVPSCNGLEVQIDLSS
                     RRFMGLKARRRALAGRTGCGVCGVEQLNDIGKPVQPLPFSQTFNLGNLDRALKHLNDF
                     QPTG"
     gene            687..3737
                     /gene="fdnG"
                     /locus_tag="MOX77_003143"
     CDS             687..3737
                     /gene="fdnG"
                     /locus_tag="MOX77_003143"
                     /EC_number="1.17.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:1272..1274,aa:Sec)
                     /transl_table=11
                     /product="formate dehydrogenase-N subunit alpha"
                     /protein_id="HCA3358598.1"
                     /translation="MQVSRRQFFKICAGGMAGTTAAALGFAPGVALAETRQYKLLRTR
                     ETRNTCTYCSVGCGLLMYSLGDGAKNAKASIFHIEGDPDHPVSRGALCPKGAGLVDFI
                     HSESRLKFPQYRAPGSDKWQQISWEEAFDRIAKLMKEDRDANYQAQNAEGVTVNRWLT
                     TGMLCASASSNETGYLTQKFSRALGMLAVDNQARVUHGPTVASLAPTFGRGAMTNHWV
                     DIKNANLVVVMGGNAAEAHPVGFRWAMEAKIHNGAKLIVIDPRFTRTASVADFYAPIR
                     SGTDIAFLSGVMLYLLTNEKYNREYTEAYTNASLIVREDFGFDDGLFTGYDADKRQYD
                     KTSWHYELDENGFAKRDTTLQHPRCVWNLLKQHVSRYTPDVVENICGTPKADFLKVCE
                     YIAETSAKDKTASFLYALGWTQHSIGAQNIRTMAMIQLLLGNMGMAGGGVNALRGHSN
                     IQGLTDLGLLSQSLPGYLTLPSEKQTDLQTYLAANTPKPLLKDQVNYWGNYPKFFVSM
                     MKAFFGDKATAENSWGFDWLPKWDKGYDVLQYFEMMKQGKVNGYICQGFNPVASFPNK
                     NKVVASLSKLKYLVTIDPLNTETSTFWQNHGESNDVDPSKIQTEVFRLPSTCFAEENG
                     SIVNSGRWLQWHWKGADAPGIAMTDGEILAGIFLRLRKMYSEQGGANPEQVLNMTWNY
                     TKPYEPASEEVAMESNGKALADLIDPATGAVVVKKGQQLSSFAQLRDDGTTSSGCWIF
                     AGSWTPEGNMMARRDNADPSGLGNTLGWAWAWPLNRRILYNRASADPQGNPWDPKRQL
                     LKWEGGKWAGWDIPDYSAAAPGSDVGPFIMQPEGMGRLFAIDKMAEGPFPEHYEPFET
                     PLGTNPLHPNVISNPAARIFKDDADALGKADKFPYVGTTYRLTEHFHYWTKHALLNAI
                     AQPEQFVEIGEKLANKLGIAHGDTVKVSSNRGYIKAKAVVTKRIRTLKADGKDIDTIG
                     IPIHWGYEGVAKKGFIANTLTPFVGDANTQTPEFKSFLVNVEKV"
     gene            3750..4652
                     /gene="fdxH"
                     /locus_tag="MOX77_003144"
     CDS             3750..4652
                     /gene="fdxH"
                     /locus_tag="MOX77_003144"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit beta"
                     /protein_id="HCA3358599.1"
                     /translation="MAYQSQDIIRRSATNGFTPAPQARDHQEEVAKLIDVTTCIGCKA
                     CQVACSEWNDIRDEVGNNVGVYDNPADLTAKSWTVMRFSEVEQNDKLEWLIRKDGCMH
                     CADPGCLKACPAEGAIIQYANGIVDFQSEQCIGCGYCIAGCPFNVPRLNPEDNRVYKC
                     TLCVDCVVVGQEPACVKTCPTGAIHFGSKEDMKTLAGERVAELKTRGYDNAGLYDPAG
                     VGGTHVMYVLHHADKPNLYHGLPENPEISETVKFWKGVWKPLAAFGFAATFAASVFHY
                     VGVGPNRAEEEDDNLHEEKDEVRK"
     gene            4649..5284
                     /gene="fdoI"
                     /locus_tag="MOX77_003145"
     CDS             4649..5284
                     /gene="fdoI"
                     /locus_tag="MOX77_003145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase cytochrome b556 subunit"
                     /protein_id="HCA3358600.1"
                     /translation="MKRRDTIVRYTAPERINHWIVAFCFVLAAVSGLGFLFPSFNWLM
                     HILGTPQLARILHPFVGVVMFASFIIMFFRYWHHNLINRDDIFWAKNIRKIVVNEEVG
                     DTGRYNFGQKCVFWAAIIFLVLLLVSGVIIWRPYFAPAFSIPVIRFALMLHSFAAVAL
                     IVVIMVHIYAALWVKGTITAMVEGWVTRSWAKKHHPRWYREVRKTTEKETE"
     gene            5281..6210
                     /gene="fdhE"
                     /locus_tag="MOX77_003146"
     CDS             5281..6210
                     /gene="fdhE"
                     /locus_tag="MOX77_003146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory protein FdhE"
                     /protein_id="HCA3358601.1"
                     /translation="MSIRIIPQDELGSSEKRTADMIPPLLFPRLKNVYNRRAERLREL
                     AENNPLGDYLRFAALIAHAQEVVLYDHPLEMDLTARIKEANDQGKPPLDIHVLPRDKH
                     WQKLLHSLIAELKPEMNGPALAVIENLEKASEQELEQMASALFASDFASVSSDKAPFI
                     WAALSLYWAQMASLIPGKARAEYGEARQYCPVCGSMPVSSMVQIGTTQGLRYLHCNLC
                     ETEWHVVRVKCSNCEQSRDLHYWSLENEQAAVKAESCGDCGTYLKILYQEKDPKVEAV
                     ADDLASLVLDARMEQEGFARSSINPFLFPGEGE"
     gene            complement(6248..6622)
                     /locus_tag="MOX77_003147"
     CDS             complement(6248..6622)
                     /locus_tag="MOX77_003147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HCA3358602.1"
                     /translation="MVKGSALFDTNILIDLFSGRIEAKHALEAYPPQNAISLITWMEV
                     MVGAKKYHQENRTRIALSAFNIIGVTQEIAERSVIVRQEYGMKLPDAIILATAQVHRC
                     ELVTRNTKDFADIPGVITPYHL"
     gene            complement(6622..6864)
                     /locus_tag="MOX77_003148"
     CDS             complement(6622..6864)
                     /locus_tag="MOX77_003148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005224335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix protein, CopG family"
                     /protein_id="HCA3358603.1"
                     /translation="MMAGMDMGRILLDLSDDVIKRLDDLKVQRNLPRAELLREAVEQY
                     LERQDRAETTISKALGLWQGCEEDGVEYQRKLREEW"
     gene            7069..7998
                     /locus_tag="MOX77_003149"
     CDS             7069..7998
                     /locus_tag="MOX77_003149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HCA3358604.1"
                     /translation="MALESGIAQLVEEFIAAGRPSSREQNIDDRRAGYIASTTLAGET
                     ETRVQVEDIELDAMTFRVVSPLNATGKLPCIIYYHGGCFVSGGFATHDNQLRQLAFYS
                     RCRVIAAQYRLAPEHTFPAAHNDAETGANTIWKYAQKLGIDRENITLAGDSAGGHLAL
                     VTALRLKAARQWQPAQLILIYPMLDATARFASYTCNGLDYIITRDTLLSGYEMYMPRT
                     DPLHPEASPLWREDFAGLPSTHIITAEFDPLRDEGEALYQRFQEQGVECTCQRYLGVI
                     HGFFQLGGVSKTARDAIRDVAWRVVSPSTSKMT"
     gene            8084..8395
                     /locus_tag="MOX77_003150"
     CDS             8084..8395
                     /locus_tag="MOX77_003150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HigB family
                     toxin"
                     /protein_id="HCA3358605.1"
                     /translation="MHVISRKLFNEAMLMYPNHELALTELLNVLEKKTFTQPEEMKRY
                     IPSLDNFKYRDKWWVIDVSGNSLRLISYIDFRLHKIFVKHIVSHAEYDKLTAYYRGNE
                     E"
     gene            8392..8838
                     /locus_tag="MOX77_003151"
     CDS             8392..8838
                     /locus_tag="MOX77_003151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462910.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HigA family
                     antitoxin"
                     /protein_id="HCA3358606.1"
                     /translation="MRTHRQMDATSAKKIVDTFSDAVKSVPLMGEDRNDNEYRRALAL
                     VEFLVDHDDLENPLFELLCARISEYEKHAPEFKALNQHLEKTPPGVSVLRTLMDQYGL
                     KAADLANELGSKSNVSNILNGRRALTVNHIKALTQRFKLPADAFIE"
     gene            complement(8853..9794)
                     /gene="fabY"
                     /locus_tag="MOX77_003152"
                     /gene_synonym="yiiD"
     CDS             complement(8853..9794)
                     /gene="fabY"
                     /locus_tag="MOX77_003152"
                     /gene_synonym="yiiD"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001666856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid biosynthesis protein FabY"
                     /protein_id="HCA3358607.1"
                     /translation="MYHLRVPQTEEELERYYQFRWEMLRKPLHQPKGSERDGWDALAH
                     HQMVVDEEGNLVAVGRLYINADNEASIRFMAVHPSVQDKGLGTLMAMTLESVARQEGV
                     KRVTCSAREDAVEFFAKLGFVNQGEITTPTTTPIRHFLMIKPVASLDDILHRGDWCGQ
                     LQQAWYEHIPLSEKMGVRIQQYTGQKFITTMPETGNQNPHHTVFAGSLFSLATLTGWG
                     LIWLMLRERHLGGTIILADAHIRYSKPISGKPNAVADLGSLSGDLDRLARGKKARVQL
                     QVELLGGETAGAIFEGIYIVLPAKPFGPYEEGGNEEE"
     gene            complement(9839..10276)
                     /gene="dtd"
                     /locus_tag="MOX77_003153"
     CDS             complement(9839..10276)
                     /gene="dtd"
                     /locus_tag="MOX77_003153"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000560980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-tyrosyl-tRNA(Tyr) deacylase"
                     /protein_id="HCA3358608.1"
                     /translation="MIALIQRVTRASVTVEDEVTGKIGPGLLVLLGVEKEDDEQKANR
                     LCERVLGYRIFSDVDGKMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSGGAAPDRA
                     QALYEYFVERCRQQAINTQTGRFAADMQVELVNDGPVTFWLQV"
     gene            complement(10273..11145)
                     /locus_tag="MOX77_003154"
     CDS             complement(10273..11145)
                     /locus_tag="MOX77_003154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence factor BrkB family protein"
                     /protein_id="HCA3358609.1"
                     /translation="MLKTVHQKAGRHTRPVRAWLKLLWQRIDEDNMTTLAGNLAYVSL
                     LSLVPLIAVVFALFAAFPMFSDVSIQLRHFIFANFMPATGDVIQRYIEQFVANSNKMT
                     AVGACGLIVTALLLMYAIDSALNTIWRSKRTRPKVYSFAVYWMILTLGPLLAGASLAI
                     SSYLLSLRWASDLNTVIDNVLRILPLLLSWISFWLLYSIVPTTRVPNRDALVGAFVAA
                     LLFEAGKKGFALYITMFPSYQLIYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYR
                     KLKQAAEQEEADQP"
     gene            complement(11139..11738)
                     /gene="yihX"
                     /locus_tag="MOX77_003155"
     CDS             complement(11139..11738)
                     /gene="yihX"
                     /locus_tag="MOX77_003155"
                     /EC_number="3.1.3.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphatase"
                     /protein_id="HCA3358610.1"
                     /translation="MLYIFDLGNVIVDIDFNRVLGVWSDLSRVPLASLKQKFTMGETF
                     HQHERGEITDEAFAEAFCHEMALSLSYEQFAHGWQAVFVGLRPEVIAIMHKLREQGHR
                     VVVLSNTNRLHTHFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQKEGFSAAD
                     AVFFDDNADNIEGANQLGITSILVKDKATIPDYFAKLLC"
     gene            complement(11929..12732)
                     /locus_tag="MOX77_003156"
     CDS             complement(11929..12732)
                     /locus_tag="MOX77_003156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HCA3358611.1"
                     /translation="MSLTELTGNPRHDRLLMLIDERGYMNIDELASLLEVSTQTVRRD
                     IRKLSEQGLITRHHGGAGRASSVVNTAFEQREISWTQEKKAIAEAVADYIPDGSTIFI
                     TIGTTVEQVARALLNHNHLRIITNSLRVAHILYNNPRFEVMVPGGTLRPHNSGIIGPS
                     AAAFVAGFRADYLVTSVGAIESDGALLEFDVNEASVVKTMMAHSRHILLAADHTKYHA
                     SAAVEIGNVSQITALFTDEYPGPALQNLLQSQQIEVVQVSPSLDDAVSA"
     gene            complement(12766..>13501)
                     /locus_tag="MOX77_003157"
     CDS             complement(12766..>13501)
                     /locus_tag="MOX77_003157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462904.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ribokinase"
                     /protein_id="HCA3358612.1"
                     /translation="VDFIGRVGDDDTGNSLLAELESLGVNTRYTRRYTQAMSSQSAIM
                     VDAKGERIIVNYPSPDLLPDADWLNDIDFSQWDVVLADVRWHDGAKQAFTLARQAGVM
                     TVLDGDITPQDISELVALSDHAAFSEPGLARLTGMSEAIDALKKAQMLTNGHVYVTRG
                     SEGCNWLEKAAVRHQPGFTVEVVDTTGAGDVFHGALAFGLASGYAIEEAVRFASGVAA
                     LKCTRPGGRAGIPDCEQTRSFLSLFV"
BASE COUNT         3301 a         3677 c         3524 g         2999 t
ORIGIN      
        1 acccgtcggt tgaaaatcat tcagatgttt taacgcgcga tcaaggttac cgagattaaa
       61 cgtttggcta aacggcagcg gttgcaccgg cttaccaatg tcattgagct gttccacgcc
      121 acacacgccg caaccggtgc gtccggccag cgcgcgacga cgcgctttca gccccataaa
      181 tcgacggctg gaaagatcaa tctgcacttc aagtccgtta caggacggca caacgtccat
      241 gccatagatt tcacgcgggc tgtcaatgat cccttccgac agagaaaacc ccattgcgaa
      301 atgcgtcaga tctttcggag aggccatcat aacgacatgc gaaatgccgt tatacaccag
      361 tgccactggc acttcctcgg caacatcatc aagttgggag gactgcaaat cctcgcgttt
      421 ccagagtgtc aactggcgtg aggttgtgaa atcagtcaca tttaggactt cttcagacag
      481 tatattgttc actttctttt aaccatataa gaacacacac accaacatta tggtattctg
      541 ttacaactcc tcccggatgg aggaaaattt atccaattct gaacctttgc gggcccgtcc
      601 gcaaagaaaa ataacaacca ctccctgagc gtttcagata gagaaatgtg aaagagaagt
      661 gacaatgtcg aaacaaggag caaaccatgc aggtcagcag aaggcagttc tttaagatct
      721 gcgctggcgg tatggcaggc accacggcgg cggcactggg cttcgcgccc ggcgtagcgc
      781 tagcggaaac acggcaatat aaactgctgc gcacccgcga aacccgtaac acctgcacct
      841 actgttccgt tggctgcggg ctgttgatgt acagcctcgg cgacggtgcg aaaaacgcca
      901 aagcatctat tttccatatc gaaggggacc cggatcatcc ggtaagccgt ggcgcgctgt
      961 gcccgaaagg ggccggtctg gtggacttta tccactctga aagccgcctg aaattcccgc
     1021 aataccgcgc gccgggttca gataagtggc aacagatcag ttgggaagaa gcgtttgacc
     1081 gcatcgctaa actgatgaag gaagatcgcg acgccaacta tcaggcgcag aacgccgaag
     1141 gcgttaccgt taaccgctgg ctcaccaccg ggatgctgtg cgcttccgca tccagtaacg
     1201 agacgggtta tttaacgcaa aaattctccc gcgcgctggg tatgctcgcg gtcgacaacc
     1261 aggcgcgtgt ctgacacgga ccaacggtag caagtcttgc tccaacattt ggtcgcggtg
     1321 cgatgaccaa ccactgggtc gacatcaaga acgccaacct cgtcgtggtg atgggcggta
     1381 acgccgcaga agctcacccg gtcgggttcc gctgggcgat ggaagccaaa attcacaacg
     1441 gcgcgaagct gattgtgatc gatccgcgct tcacgcgtac cgcgtcggtg gccgattttt
     1501 atgcgccaat acgctctggt actgacattg ccttcttgtc aggcgtgatg ctgtatctgc
     1561 tgaccaacga aaaatacaac cgtgaataca ccgaggccta taccaatgcc agcctgatcg
     1621 tgcgtgaaga ttttggcttc gatgatggtc tgttcaccgg ctatgacgca gacaagcggc
     1681 agtacgataa aaccagttgg cactatgagc tggacgaaaa cggttttgcc aaacgcgata
     1741 cgacactgca acacccgcgc tgtgtctgga atctgttgaa acagcatgtc tcacgctata
     1801 cgccggacgt ggtagaaaat atctgcggta cgccgaaagc ggacttcctg aaagtgtgcg
     1861 agtacattgc agaaaccagc gcaaaagata aaaccgcgtc gttcctgtac gcgctgggct
     1921 ggacgcagca ttccatcggc gcgcagaaca tccgtactat ggcgatgatc cagcttctgc
     1981 tcggtaacat ggggatggcg ggcggcggcg ttaacgccct gcgcggtcac tccaacattc
     2041 agggactgac cgacttagga ctgctgtcgc aaagtctgcc gggctatctg acgctgccga
     2101 gcgaaaaaca gaccgacctg caaacctatc tggctgccaa tacgccgaag ccattgttga
     2161 aggatcaggt caactactgg ggcaactatc cgaaattctt cgtctcgatg atgaaggcct
     2221 tctttggtga taaagcgaca gcggaaaata gctggggctt cgactggcta ccgaagtggg
     2281 acaaagggta cgatgtactg cagtacttcg agatgatgaa acagggcaag gtcaacggct
     2341 atatctgcca gggctttaac ccggtggctt cattcccgaa caaaaacaaa gtggtcgcgt
     2401 cgctttccaa actgaagtac ctagtgacta tcgatccgct caacacggag acctccacct
     2461 tctggcaaaa ccacggtgag tcgaacgatg ttgatccgtc aaaaatccag accgaagtgt
     2521 tccgtctgcc ttccacctgt tttgccgaag agaatggttc gatcgtcaac tcgggtcgct
     2581 ggctgcagtg gcactggaag ggcgcggacg ccccgggaat tgccatgacc gacggcgaaa
     2641 tcctcgccgg tatcttctta cgcctgcgta agatgtactc tgaacagggc ggcgccaacc
     2701 cggaacaggt gttgaatatg acctggaact acaccaaacc gtacgaaccc gcctctgaag
     2761 aagtggcgat ggaaagtaat ggtaaagcgc tggccgatct tatcgacccg gcaaccggcg
     2821 cggtggtagt gaagaaaggt caacagctca gttcgttcgc gcaactgcgt gatgacggta
     2881 cgacgtccag cggctgctgg attttcgccg gtagctggac gccggaaggc aacatgatgg
     2941 cgcgtcgtga taacgccgac ccgtctggtc tcggcaacac gctgggctgg gcatgggcat
     3001 ggccgcttaa ccgccgtatt ctgtataacc gcgcttccgc cgatccgcag ggtaacccct
     3061 gggacccgaa acgtcagcta ctgaaatggg aaggcggaaa atgggccgga tgggatattc
     3121 cggactacag tgccgctgcg ccaggcagcg acgtcggacc gtttatcatg cagccggaag
     3181 ggatgggtcg cctgtttgct atcgataaga tggcggaagg gccgttcccg gaacactacg
     3241 agccgtttga aacgccgctg ggcactaacc cgctgcaccc gaacgttatc tctaaccctg
     3301 ccgcccgtat ctttaaagac gatgccgacg cgctgggtaa agcggataag ttcccgtatg
     3361 tcggaaccac ttaccgtctg accgagcact tccactactg gaccaagcac gcgttgctta
     3421 acgctatcgc ccagccggaa cagtttgtgg aaattggcga gaagctggcg aataagctcg
     3481 gtatcgcgca tggcgatacc gtgaaggtct cctcgaaccg cggctatatc aaagccaaag
     3541 cggtggtgac caagcgtatt cgcacgctga aagcggacgg caaggatatc gataccatcg
     3601 gtattcctat tcactggggc tacgaaggcg tggcgaaaaa aggttttata gccaatacgt
     3661 taacgccttt cgtcggcgat gcgaacacgc aaacgccgga gtttaaatcc ttccttgtga
     3721 acgtggaaaa ggtgtaacgg agacgaccta tggcttatca atcgcaagac atcattcgtc
     3781 gttccgccac taacggtttc acccccgcgc cccaggcgcg ggaccaccag gaagaggtgg
     3841 cgaaactcat cgacgtcacc acctgtatcg gctgtaaagc gtgtcaggtg gcgtgctccg
     3901 agtggaacga catccgtgat gaagtgggca ataacgtcgg ggtgtatgac aacccggcgg
     3961 acttaactgc gaaatcctgg acggtgatgc gcttctcgga agtggaacag aacgacaaac
     4021 tggagtggct gatccgtaag gatggctgta tgcactgcgc cgatcccggc tgcctgaagg
     4081 cctgtccggc ggaaggggcg atcattcagt acgctaacgg tattgtcgac ttccagtccg
     4141 agcagtgtat cggctgcggc tactgtatcg ctggctgccc gttcaacgtg ccgcgcctca
     4201 acccggaaga caaccgcgtc tataaatgta cgctgtgcgt tgactgtgtg gtggtcggcc
     4261 aggaaccggc ctgcgtgaag acctgtccaa ccggcgctat tcattttggc tcgaaagagg
     4321 atatgaaaac gctggcgggc gagcgggtgg cggaactcaa aacccgtggt tatgacaatg
     4381 cgggtctgta cgatccggcg ggcgtaggcg gtacgcatgt catgtacgtg ctgcatcatg
     4441 ccgacaagcc gaatctgtat cacggtctgc cggagaaccc ggaaatcagc gaaaccgtta
     4501 agttctggaa aggcgtctgg aaaccgctcg ccgcgttcgg ttttgccgcg acctttgccg
     4561 ccagcgtctt ccactatgtc ggcgtcggcc cgaaccgcgc ggaagaggaa gatgacaacc
     4621 tgcatgaaga gaaagacgag gtgcgcaaat gaaacgacgt gacaccatcg tgcgctatac
     4681 ggcgccggaa cgcatcaacc actggatcgt cgccttctgc ttcgtgctgg cggcggtgag
     4741 tgggctgggc tttttattcc catccttcaa ctggttgatg catatcctgg gcaccccaca
     4801 actggcgcga attctgcacc cgtttgtggg cgtggttatg tttgcctcgt tcatcatcat
     4861 gtttttccgt tattggcacc acaatctaat caatcgggat gatatctttt gggcaaagaa
     4921 tattcgtaag atcgtcgtca acgaggaagt gggtgacacc gggcgttata acttcggtca
     4981 gaaatgcgta ttctgggcgg cgattatctt cctggtgctg ctgctggtga gcggggtaat
     5041 tatctggcgt ccgtactttg cgcctgcttt ctcaatcccg gtgatccgat tcgcgttaat
     5101 gttgcattct tttgccgcag tagcgttaat tgtggttatc atggtgcata tctacgccgc
     5161 cctttgggtg aaaggcacca ttaccgcgat ggtggaaggc tgggtaaccc ggtcgtgggc
     5221 gaagaaacat cacccacgct ggtaccgaga agtccgcaag acaacggaaa aagaaactga
     5281 atgagtattc gcataatccc gcaagatgag ctggggtcga gcgagaaacg tacggcggat
     5341 atgattccgc cgttattgtt cccccgactc aaaaacgtct acaaccgccg cgccgaacgt
     5401 ctgcgcgagc tggctgaaaa taacccgctg ggcgattacc tgcgctttgc cgcgcttatc
     5461 gcgcacgcgc aggaagtggt gctgtacgac catccgctgg agatggatct gaccgcacgc
     5521 attaaagaag cgaacgacca gggcaagccg ccgctggata tccacgtgct gccgcgtgat
     5581 aagcactggc aaaaactgct gcattcgtta attgccgagc taaaacccga gatgaacggc
     5641 cccgcgctgg cggtgattga gaacctggag aaagcctcag agcaggagct agagcagatg
     5701 gccagcgcgc tgtttgcctc ggattttgcc tccgtcagca gcgataaagc cccgtttatc
     5761 tgggccgcgc tctcccttta ctgggcgcaa atggccagct tgattccagg caaagcccgc
     5821 gcggaatacg gtgaagcgcg ccagtattgc ccggtatgcg gttcgatgcc ggtctccagc
     5881 atggtgcaaa tcggcaccac gcaggggctg cgttatctgc actgtaacct gtgcgaaacc
     5941 gaatggcacg tcgtgcgcgt aaaatgcagt aactgcgaac agagccgcga cttacactac
     6001 tggtcgctgg aaaatgagca ggctgcggtg aaagccgaaa gctgcggcga ttgcgggact
     6061 tacctgaaga ttctctatca ggaaaaagac ccgaaagtgg aagcagtggc cgacgacctc
     6121 gcctcgctgg tgctggacgc gcgcatggaa caggagggct tcgcccgaag ctctatcaac
     6181 ccgttcctgt tcccggggga aggggaataa gttttttact cagaccgggc gaagtttgcc
     6241 gtccggtcta caagtgatac ggcgtgatca ctcccggaat atcggcaaag tcttttgtat
     6301 tgcgcgtcac aagctcacaa cgatggactt gtgcagtggc cagaatgatc gcatccggga
     6361 gtttcatgcc atactcctgc ctgacaatga cgcttcgttc cgcgatttcc tgtgttacgc
     6421 caataatatt gaacgcactt aatgcaatgc gcgtgcggtt ttcctgatga tatttcttag
     6481 cacccaccat cacttccatc catgtgataa ggctaatcgc attttgtggc ggatacgctt
     6541 ccagcgcatg tttcgcttca attcgaccgc taaacaggtc gatgaggata ttggtatcaa
     6601 aaagcgcaga ccctttgacc attaccattc ctcacgaagt ttacgttggt attcaacgcc
     6661 atcttcctca cagccttgcc agagccccaa tgctttcgaa attgtggtct cagcccgatc
     6721 ctgtctttcc agatactgct caacggcctc ccgcaagagt tctgcacgag gtaggttgcg
     6781 ttgcaccttg agatcgtcaa gccgtttaat cacatcgtct gataaatcga gtaaaattct
     6841 gcccatatcc atcccagcca tcatactcac atatacctcc agtatatcat tcgcgcttat
     6901 ttttcaaaca acatacacct gagactgacg agaaaatagt tattacgcga acgattttta
     6961 tttttgcgag ccgctttcca gaatcgtacg cagcccaatt ttcccatttt cattcgaacc
     7021 aaatcgagtt ataaaactgt atatccatac agataaaggc aatgaaaaat ggcactggaa
     7081 agcgggattg cgcagttagt ggaggaattt atcgcggcgg gacgcccctc ttctcgcgaa
     7141 cagaatattg atgaccggag ggcgggctac atcgctagca cgacattggc aggagaaaca
     7201 gaaacccgcg tccaggttga agatattgaa ctcgatgcca tgacgtttcg cgtggtttcg
     7261 ccgctcaatg ccacagggaa attaccctgc atcatttatt atcatggtgg ctgctttgtc
     7321 agcggcggtt ttgccactca cgataaccag ttaaggcagt tagcttttta cagccgttgt
     7381 cgcgtgattg cggcacagta ccgacttgca ccagagcaca ccttcccggc cgcacataac
     7441 gatgccgaaa ccggagccaa tactatctgg aaatatgccc agaaactggg gatagatcgc
     7501 gagaacatta cgcttgctgg tgacagcgcg ggtgggcatc tggcgctggt caccgcgcta
     7561 cgcctgaaag ccgcccgtca atggcaacct gcacagctga ttctgatcta ccccatgctg
     7621 gacgcaaccg ccaggtttgc gagctacacc tgtaatgggc tggattacat tatcacgcgt
     7681 gacacgctgc tttcaggcta cgagatgtat atgccgcgaa ccgatccact gcatcctgaa
     7741 gccagtccgc tctggcgtga ggacttcgcc ggtctgccat ccacgcacat cattactgcc
     7801 gaattcgacc cactgcgcga tgagggcgag gccctgtatc aacggttcca ggaacagggt
     7861 gtggaatgca cttgccagcg ctatctcggc gttatccacg ggtttttcca attgggcgga
     7921 gtgagcaaga cggcgcggga cgcaatacgc gacgtggcct ggcgtgttgt aagtccatca
     7981 acaagcaaaa tgacctaaaa ttcaattttg ttttcaactt gaaaactgga taacgttgcg
     8041 ctaaattgtt ttcaggttga aaactttgta atggaactac attgtgcatg ttatcagccg
     8101 aaaactgttc aatgaagcga tgctcatgta tccaaaccat gagcttgctc tcactgagtt
     8161 gctgaatgtt ctggagaaaa aaacattcac tcagcctgaa gagatgaagc ggtatattcc
     8221 ttcgctggat aattttaagt acagagataa atggtgggtg attgatgttt ctggtaacag
     8281 cctgagactc atttcctaca tagatttcag gttacataag atatttgtga aacatatcgt
     8341 ttcccatgcc gaatatgaca aactgaccgc atattatcgg ggtaatgaag aatgagaact
     8401 catcgtcaga tggatgcaac cagcgcaaaa aagatcgttg ataccttcag cgatgcggta
     8461 aaaagcgtcc cactgatggg ggaagaccga aatgacaatg agtatcgcag ggcactagcg
     8521 ctagtggagt ttctggtcga ccacgacgat cttgaaaacc cactatttga attgctctgt
     8581 gcccgaatca gtgaatacga aaaacatgcg ccggaattca aagcactcaa ccaacacctg
     8641 gagaaaacgc cccctggcgt ttcagtattg cgaacgctca tggatcaata cggtctcaaa
     8701 gcagcagatc ttgccaacga acttggttct aaatcgaacg tcagcaacat cttaaatggc
     8761 cgcagagcac taacggttaa tcatattaaa gcgcttacac aacgctttaa actaccagcg
     8821 gatgccttca tcgagtagtt ggatatgtcc agctactctt cctcattccc gccctcttca
     8881 tacgggccga acggtttcgc aggtagtacg atataaatgc cttcgaaaat tgccccggcg
     8941 gtctcgccgc ccaacagttc aacctgcaac tggacacgcg cttttttacc ccgcgccagc
     9001 ctgtccaaat caccgcttag cgaccccaaa tcagccacgg cgtttggctt tccgctaatg
     9061 ggtttactgt agcgaatatg ggcgtcagca agaataatcg tcccgcccag gtggcgttca
     9121 cggagcatca gccagataag tccccatccg gtcagcgtcg ccagggagaa caggctgccg
     9181 gcaaacaccg tgtgatgcgg attttgatta ccggtttccg gcatcgtggt gataaatttt
     9241 tgcccggtgt actgctgaat gcgcaccccc atcttttcac tcaatggaat gtgctcatac
     9301 caggcctgct gaagctgccc gcaccaatcg ccgcgatgca ggatatcatc cagcgatgct
     9361 accggtttaa tcatcagaaa atggcggatt ggcgtggttg tgggcgtagt aatctccccc
     9421 tgattgacaa acccgagttt ggcaaagaac tcaaccgcat cttcgcgcgc gctgcaggtg
     9481 acgcgcttaa cgccttcctg gcgggcgaca gactccaggg tcatcgccat taatgtcccc
     9541 agccctttat cctgtaccga gggatgtaca gccataaaac ggatagacgc ctcgttatct
     9601 gcattgatat acaggcggcc cactgcaact aagtttcctt cttcgtccac caccatttga
     9661 tggtgcgcca acgcatccca gccatcccgt tccgaccctt tcggctggtg cagcggttta
     9721 cgcagcatct cccagcgaaa ctggtagtaa cgttctaatt cttcttctgt ttgcggaact
     9781 cgaaggtgat acatagccgt actctctctt gttatccgcg gccacgccgg aagctgactc
     9841 atacctggag ccagaatgtc acgggaccgt cattaaccag ctcaacctgc atatcggcag
     9901 cgaagcgtcc ggtttgcgtg tttatcgcct gctggcggca gcgttcgaca aaatattcat
     9961 aaagcgcctg cgcgcgatcc ggcgcagccc cgccggaaaa gcttggccgc ataccgcgtt
    10021 cggtatctgc cgccagcgta aactgcgaca ccaccagcac gctgccgcca gcctgttgta
    10081 cattcagatt catcttgccg tcaacatcgc tgaagatacg gtatcccagc acgcgctcgc
    10141 acagacgatt cgctttttgt tcgtcatctt ctttttcgac acccaataac accaaaagtc
    10201 ctgggccgat tttacccgtc acctcgtcct ccacggtgac gctggcacgg gttacgcgtt
    10261 gaattaatgc aatcatggtt ggtcagcttc ttcttgttct gcggcttgtt tgagttttcg
    10321 gtattccccg agagtgacag ttatttctgc gccaagcaag actatacacc aggtccagta
    10381 tacccagaca aacaggatag ggatcactgc cagtacgcca taaatgagct gatatgacgg
    10441 gaacatggtg atataaagcg cgaaaccttt ctttccggcc tcgaacagca acgctgcgac
    10501 aaacgcgccg acaagggcgt cacggttcgg tacgcgagtt gttgggacaa tactgtaaag
    10561 taaccagaat gagatccacg agagcagcag cggaaggatg cgcaatacat tgtcgatgac
    10621 cgtattcaga tcgctggccc agcgtaaaga aagcagatag gagctgatcg ccagactggc
    10681 accggcgaga agcgggccga gcgtgaggat catccagtac accgcaaaag agtacacttt
    10741 tgggcgtgtg cgtttgctgc gccagatagt gtttaaggcg ctatcaatgg cgtacatcaa
    10801 cagcaatgcc gtcacaatca gtccacaggc gcccaccgcc gtcattttgt tggagttagc
    10861 gacaaactgc tcaatatagc gctgaatcac gtctccggtg gctggcataa agttagcaaa
    10921 aataaaatgg cgtaactgaa tgctgacatc agaaaacatc ggaaaagcag cgaaaagggc
    10981 aaaaacgacg gcaataagcg gtactaagga gagtaatgag acataggcga ggtttcccgc
    11041 cagagtcgtc atattatcct catcgatacg ctgccataat agcttgagcc aggcccgaac
    11101 agggcgcgta tggcgtccag ctttttggtg aacggttttt agcataacag cttcgcgaaa
    11161 tagtcaggga tggtggcttt atccttcacc agaatgctgg tgatccccaa ctggttggcc
    11221 ccttctatat tatcggcatt gtcgtcgaaa aagaccgcat cggcagcgga aaaaccttct
    11281 ttctgcagga cgtgctgata aatacgcgct tccggtttac gcattcccaa atcctgcgat
    11341 aaatagatat ggtcggcggc agcgcgcacc tccgggtatt cctccggcca gaagtgggta
    11401 tgcagtcggt tagtattgga taacaccacc acgcgatgcc cctgctcgcg cagtttatgc
    11461 atgatagcaa tcacttcggg ccgtaatccg acaaataccg cctgccagcc gtgcgcaaat
    11521 tgttcataac tgagcgataa cgccatttca tgacagaaag cttcagcaaa cgcttcgtcc
    11581 gttatctcac cgcgttcatg ttggtgaaaa gtctcgccca tcgtaaattt ttgcttcagc
    11641 gaagccaacg gtactcgact caggtcgctc cacacaccta atacgcggtt aaagtcgata
    11701 tcgacaatca cattacctaa atcaaagatg tagagcatgt cattctcctt gctaaccggg
    11761 gatgaataac tgtagcggga aaggagaagt ttgactatgt atccctttat aaatcaatta
    11821 acaaaaagac aatagaaacg cagacgatgc ccaatatcgc ctgcatcaca gcgccgtttt
    11881 attggccgga taaagcgctg acgcgaccct ccggcgcaag ggcgcttgtc acgctgaaac
    11941 ggcgtcgtcc agcgaaggac tcacctgaac cacttcgatt tgctgggatt gaagtaaatt
    12001 ctgtaatgcc ggaccgggat actcgtccgt aaacagagcg gtaatctgtg acacattgcc
    12061 gatctcaacc gccgcagaag catggtattt cgtatgatcg gcggccagca gaatatgtcg
    12121 cgagtgagcc atcatggttt tcactacgct ggcttcgttg acatcaaact ccagtaacgc
    12181 gccatcgctc tctatcgcgc ctacgctggt gacgagatag tccgcccgga accccgccac
    12241 aaacgccgcc gcggatggcc cgataatgcc gctattatgc gggcgcagcg tgccgccagg
    12301 caccatcact tcaaagcgag ggttattata aagaatgtgc gcgacgcgca ggctattggt
    12361 gataatgcgc agatgattat ggttgagcag cgcgcgcgcc acctgctcaa ccgtcgttcc
    12421 aatcgtgata aatatcgtgg agccatccgg aatatagtca gccacggctt ccgcaatggc
    12481 ttttttctct tgcgtccagg agatctctcg ctgctcaaag gcggtattga ccacactgga
    12541 cgctctgcca gcgccgccgt gatgacgcgt aatcagcccc tgctcgctta atttacgaat
    12601 atcgcggcga accgtctggg tagagacctc caacaaactg gctaactcat cgatattcat
    12661 atagccgcgc tcatcaataa gcattaacag ccgatcgtgt cgcggattac cggtcagttc
    12721 ggtaagactc atgagcattc ctctaaaagc ttcctactgc tcatattata caaaaagtga
    12781 caagaaagat cgggtttgct cacaatcagg gatacccgcc cggccacccg ggcgcgtaca
    12841 cttcagcgcg gcaacgccgc tggcgaatct gacagcctct tcgatagcgt atccgcttgc
    12901 caggccaaat gccagtgcgc catgaaaaac atcgcccgcg ccggtagtat ccaccacctc
    12961 cacggtaaaa cccggttggt ggcgtaccgc cgctttttcc aaccagttgc agccttcgct
    13021 gcctcgcgtg acatagacat gtccatttgt gagcatttgt gcttttttta gcgcatcaat
    13081 ggcttcgctc atccccgtca ggcgtgccag ccccggctcg gagaaggcgg cgtggtcgct
    13141 taacgccacc agctcgctaa tatcctgcgg cgtaatatcg ccatcaagaa cagtcatgac
    13201 gccagcctga cgcgccagcg taaacgcctg ttttgcgccg tcatgccagc gcacatccgc
    13261 caacaccaca tcccactgcg aaaaatcgat gtcgttaagc cagtcggcgt caggtaataa
    13321 atccgggctg ggataattaa cgataatccg ctctcctttg gcatccacca taatcgctga
    13381 ctgcgacgac atggcctgcg tgtagcggcg ggtatagcgg gtatttaccc ccagggattc
    13441 cagttccgcc agcaggctgt ttccggtgtc gtcatcgccc acacggccaa taaagtccac
    13501 c
//
LOCUS       DAGWFR010000111        13226 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.113, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000111 DAGWFR010000000
VERSION     DAGWFR010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 13226)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13226)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13226
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.113"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..286)
                     /locus_tag="MOX77_003158"
     CDS             complement(<1..286)
                     /locus_tag="MOX77_003158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461149.1"
                     /note="phosphoenolpyruvate-dependent sugar
                     phosphotransferase system; catalyzes the phosphorylation
                     of incoming sugar substrates concomitant with their
                     translocation across the cell membrane; IIB is
                     phosphorylated by IIA and then transfers the phosphoryl
                     group to the sugar; IIC forms the translocation channel;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit EIIBC"
                     /protein_id="HCA3358613.1"
                     /translation="MKTLLIIDANLGQARAYMAKTLLGAAAHKANLEIIDNPNDAELA
                     IVLGESLPNDNALNGKKVWLGDIGRAVAHPELFLSEAKSHATPYSAPAAAA"
     gene            complement(303..1241)
                     /gene="fruK"
                     /locus_tag="MOX77_003159"
     CDS             complement(303..1241)
                     /gene="fruK"
                     /locus_tag="MOX77_003159"
                     /EC_number="2.7.1.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-phosphofructokinase"
                     /protein_id="HCA3358614.1"
                     /translation="MSRRVATITLNPAYDLVGFCPEIERGEVNLVKTTGLHAAGKGIN
                     VAKVLKDLGIDVTVGGFLGKDNQDGFQQLFSELGIANRFQVVQGRTRINVKLTEKDGE
                     VTDFNFSGFDVTPADWERFVNDSLSWLGQFDMVCVSGSLPAGVSPEAFTDWMTRLRSQ
                     CPCIIFDSSREALVAGLKAAPWLVKPNRRELEIWAGRKLPEMKDVIDAAHALREQGIA
                     HVVISLGAEGALWVNASGEWIAKPPAVDVVSTVGAGDSMVGGLIYGLLMRESSEHTLR
                     LATAVAALAVSQSNVGITDRPQLAAMMARVDLQPFN"
     gene            complement(1241..2371)
                     /gene="fruB"
                     /locus_tag="MOX77_003160"
     CDS             complement(1241..2371)
                     /gene="fruB"
                     /locus_tag="MOX77_003160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused PTS fructose transporter subunit IIA/HPr
                     protein"
                     /protein_id="HCA3358615.1"
                     /translation="MFQLSVQDIHPGEQAGNKEEAIRQIAAALAQAGNVAGGYVDGML
                     AREQQTSTFLGNGIAIPHGTTDTRDQVLKTGVQVFQFPQGVTWGEGQVAYVAIGIAAS
                     SDEHLGLLRQLTHVLSDDSVAEQLKSATTAEELRALLMGEKQSEQLKLDNETMTLDVI
                     ASSLVTLQALNAARLKEAGAVDAAFVAKTINDSPMNLGQGIWLNDSAEGNLRSAVAVS
                     RATQAFDVEGEKAALLVTVAMNDEQPIAVLKRLGDLLLNNKADRLLSADAATLLALLT
                     SDDALTDDVLSAEFVVRNEHGLHARPGTMLVNTIKQFNSEITVTNLDGTGKPANGRSL
                     MKVVALGVKKGHRLRFTAQGEDAEQALKAIGDAIAAGLGEGA"
     gene            2741..3922
                     /gene="setB"
                     /locus_tag="MOX77_003161"
     CDS             2741..3922
                     /gene="setB"
                     /locus_tag="MOX77_003161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar efflux transporter SetB"
                     /protein_id="HCA3358616.1"
                     /translation="MHNSPAAAAPKSFDLTSTAFLIVAFLTGIAGALQTPTLSIFLTD
                     EVHARPGMVGFFFTGSAVIGIIVSQFLAGRSDKKGDRKKLIVFCCVLGMLACVLFAWN
                     RNYFILLFIGVFLSSFGSTANPQMFALAREHADRTGREAVMFSSILRAQVSLAWVIGP
                     PLAYALAMGFSFTVMYLSAAVAFIVCGVMVWFFLPSMRKDAPLATGTLEAPRRNRRDT
                     LLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFA
                     KRLGKRLLMCIAVVAGLCFYAGMLLAHAPATLLGLQLLNAIYIGILGGIGMLYFQDLM
                     PGQAGSATTLYTNTIRVGWIIAGSLAGIAAEIWNYHAVFWFALVMIVATMFCLARIKD
                     V"
     gene            complement(3987..4652)
                     /locus_tag="MOX77_003162"
     CDS             complement(3987..4652)
                     /locus_tag="MOX77_003162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358617.1"
                     /translation="MRGENSEIDLVDVSLFLIRKWLSIVIATFIFVAIGYVFVSVHHD
                     TKVVSITIKPNLDTPATYALCGYANDIQCKTTVILNQFSRFLPAEYKNKISFDAKNQL
                     VLFKAQGREESVNNIISTLKNSVDKMAAWYIDDGDIKRYSVHKNMLQTETYTKLSLLS
                     EAVKNNANIEVIDVAVTPKYKMRLVLVLCGLMGVIFSITGLLCKRALTEYRIEKKTMN
                     DRA"
     gene            complement(4654..4776)
                     /locus_tag="MOX77_003163"
     CDS             complement(4654..4776)
                     /locus_tag="MOX77_003163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358618.1"
                     /translation="MCGFYLMKKYTFAARAFIFTLVLLFVISVFGLTISVLKGM"
     gene            complement(5191..5445)
                     /locus_tag="MOX77_003164"
     CDS             complement(5191..5445)
                     /locus_tag="MOX77_003164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001675765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HCA3358619.1"
                     /translation="MDCRSGCGACCIAPSISSPIPGMPNGKPMNTRCVQLSEDNLCLI
                     FGSPLRPKVCSGLQPTGDMCLTTREEAIIYLLELEQKTLP"
     gene            5770..6342
                     /gene="yeiP"
                     /locus_tag="MOX77_003165"
     CDS             5770..6342
                     /gene="yeiP"
                     /locus_tag="MOX77_003165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007750416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P-like protein YeiP"
                     /protein_id="HCA3358620.1"
                     /translation="MPRANEIKKGMVLNYNGKLLIVKDIDIQSPTARGAATLYKMRFS
                     DVRTGLKVEERFKGDDIVDTVTLSRRGVDFSYVDGNEYVFMDKEDYTPYTFTKDQIEE
                     ELLFMPEGGMPDMQVLTWDGQLLALELPQTVDLEIVETAPGIKGASASARNKPATLST
                     GLVIQVPEYLSAGEKIRIHIEERRYMGRAD"
     gene            6555..7541
                     /locus_tag="MOX77_003166"
     CDS             6555..7541
                     /locus_tag="MOX77_003166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HCA3358621.1"
                     /translation="MTKTNLITGFLGSGKTTSILHLLAHKDPAEKWAVLVNEFGEVGI
                     DGALLADSGALLKEIPGGCMCCVNGLPMQVGLNTLLRQGKPDRLLIEPTGLGHPKQIL
                     DLLTAPVYEPWIDLRATLCILDPRLLLDQQSVANENFRDQLASADIIIANKTDRATAQ
                     SDAALQQWWRQYGGDRQLIHAEHGQIDGKLLDLPRQNLAELPASAAHSHTHASKKGLA
                     ALNLPAQQRWRRSLNSGQGHQACGWIFDADTVFDTIGLLEWARLAPVGRVKGVMRIQE
                     GLVRINRQGDDLHIETQSVAPPDSRVELISNTETDWNTLQTALLKLRLATHA"
     gene            7571..8290
                     /locus_tag="MOX77_003167"
     CDS             7571..8290
                     /locus_tag="MOX77_003167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HCA3358622.1"
                     /translation="MTMKTRYSLIILLNAAGLALFLSWYLPVNHGFWFTIDSGIFHFF
                     NQKLVESHAFLWWVAITNNRAFDGCSLLAMGGLMLSFWLKEDASGRRRIVIIGLVMLL
                     TAVVLNQLGQALIPVKRASPTLSFEHIYRVSELLHIPTKDASKDSFPGDHGMMLLIFS
                     AFMLRYFGKTAGIIALIIFVVFAFPRVMIGAHWFTDIVVGSLTVILIGLPWWLMTPLS
                     DRAIALFEDYLPGGNKQILNK"
     gene            8704..9276
                     /gene="mepS"
                     /locus_tag="MOX77_003168"
     CDS             8704..9276
                     /gene="mepS"
                     /locus_tag="MOX77_003168"
                     /EC_number="3.4.17.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional murein DD-endopeptidase/murein
                     LD-carboxypeptidase"
                     /protein_id="HCA3358623.1"
                     /translation="MVKSQPILRYILRGIPAIAVAVLLSACSTTTNTAKNMHSETHAV
                     GNSDSSSLQASQDEFENMVRNLDVKSRIMDQYADWKGVRYRLGGSTKKGVDCSSFVQR
                     TFREQFGLELPRSTYEQQEMGKAVSRNNLRTGDLVLFRAGSTGRHVGIYIGNNQFVHA
                     STSSGVIISSMNEPYWKKRYNEARRVLSRS"
     gene            9602..11158
                     /locus_tag="MOX77_003169"
     CDS             9602..11158
                     /locus_tag="MOX77_003169"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic di-GMP phosphodiesterase"
                     /protein_id="HCA3358624.1"
                     /translation="MLTRDSSSGRKILLTCIITGIAAALLIGSLQFFLSWHKRDVKYN
                     TLLSDVQHYLASYFADLKATTDILQPLTINTCQQVGAELTSRAAFSLNVRAFLLIKDK
                     KVFCSSATGAMNMPLQQLVPDIDIRKDVAMAILPGTPMMPNKPTMVIWYRNPLLNNSG
                     VFTSLNINLTPYLLYTTRQDDFNGIALIVGNTALSTFSSRLLTVAELPGTPSRQATIN
                     GLPLKIQLYADSWTYNDLWYALMLGCISGIVAGFICYFIYALRTRPGKEILTAIKHEQ
                     FYVVYQPVVDTRTLSVTGLEVLLRWRHPTAGEIPPDAFIHYAEAQQLIVPLTQHLFEL
                     IARDAPTLQKVMPVGAKFGINIAPEHLHSDSFKEDMHRLRDALPAHHFHIVLEITERN
                     MLQQYEAAKLFEWLHSAGFEIAIDDFGTGHSALIYLERFTLDYLKIDRGFIQAIGTET
                     VTSPVLDTVLTLSRRLNMLTVAEGVETPEQARWLRDHGVNYLQGYWISRPLPLKDFVL
                     WMSAPSVPEW"
     gene            11265..13070
                     /locus_tag="MOX77_003170"
     CDS             11265..13070
                     /locus_tag="MOX77_003170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HCA3358625.1"
                     /translation="MIARVMLLLVALVSAGAQAQEIKESYAFAVLGEPKYAFNFDHFD
                     YVNPAAPKGGQMTLSAIGTFDNFNRYSLRGNPGVRTEALYDTLFTTSDDEPGSYYPLI
                     ADHARYAADYSWVEISINPRARFHDGTPITARDVAFTFHKFMTEGVPQFRLVYKGTTV
                     KAIAPLTVRIELAKPGKEDMLSLFSLPIMPEKFWKNHKLSDPLSTPPLASGPYRITQW
                     KMGQYIVYSRVKNYWAANLPVNRGRFNLDTVRYDYYLDDNVAFEAFKAGAFDLRLEND
                     AKNWATRYIGKNFDNHYIIKEEQKNESAQDTRWLAFNIQRPVFKDRRVREAVTLAFDF
                     EWMNKALFYNAWSRTNSYFQNTEYAARNYPDADELVLLAPMKKDLPPEVFTQIYQPPV
                     SNGDGYDRENLLKADALLTQAGWVINGQQRVNSVTGKPLTFELLLPASSNSQWVLPFQ
                     HNLQRLGITMTIRQVDNSQLTNRMRSRDYDMMPRLWRAMPWPSSDLQISWASEYIDSS
                     YNAPGVQSPVVDKLIAQIIAAQGDKAKLVPLGRALDRVLTWNYYMLPMWYMAQDRLAW
                     WDKFSHPAIRPVYTIGLDTWWYDVNKAAKLPAARR"
     gene            13080..>13226
                     /locus_tag="MOX77_003171"
     CDS             13080..>13226
                     /locus_tag="MOX77_003171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461161.1"
                     /note="with YejAEF is involved in resistance to microcin
                     C; Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="microcin ABC transporter permease"
                     /protein_id="HCA3358626.1"
                     /translation="MGAYLIRRLLLVIPTLWAIITINFFIVQIAPGGPVDQAIAAIEF
                     GQGGA"
BASE COUNT         3183 a         3517 c         3157 g         3369 t
ORIGIN      
        1 gagcagccgc agcaggggcg ctgtaagggg tcgcatggct tttggcttca ctcagaaaca
       61 gttccggatg cgcgacggcg cgaccaatat cccccagcca aacctttttg ccgttcaaag
      121 cattgtcgtt cggcagagat tcgcccagca cgatcgccag ttcagcatca ttcggattgt
      181 cgataatttc cagatttgct ttatgcgccg ccgctccaag cagggttttc gccatgtaag
      241 cgcgagcctg gccgagatta gcgtcaatta tcagcagcgt tttcattatg cctctcctgc
      301 tgtcagttaa acggttgtaa gtcgacacgc gccatcattg cggccaactg aggacgatcg
      361 gtaataccca cattgctctg gctgaccgcc agcgcggcaa ccgccgtcgc cagacgcagc
      421 gtatgttcgc tggactcgcg catcagcagg ccgtaaatca atccgccaac catggaatcg
      481 cctgcgccga cggtacttac cacgtcaacc gccggtggtt tagcgatcca ttctcctgag
      541 gcgttaaccc acagcgcgcc ttccgccccc agcgaaatca ccacatgagc gataccctgt
      601 tcgcgtaacg cgtgcgccgc atcaatcaca tctttcattt ccgggagctt acgacccgcc
      661 caaatttcca gttcgcggcg attcggtttc accagccacg gcgcagcttt aagaccggcg
      721 actaacgctt cacggctact atcaaagata atgcatggac actggctgcg cagacgcgtc
      781 atccagtcgg tgaacgcttc cggactcacg ccagccggta agctaccgct gacgcagacc
      841 atatcgaact gacccagcca gctcagggag tcgttaacaa agcgttccca gtctgcggga
      901 gtcacgtcaa agccggaaaa gttgaagtcg gtcacttcgc catctttttc cgtcagcttc
      961 acgttgatgc gggtccggcc ctgaaccacc tgaaagcggt tagcgatacc cagttcgctg
     1021 aataattgct gaaaaccgtc ctggttatct ttaccgagaa aaccgccgac agtgacgtcg
     1081 atgcctaagt ctttcagcac tttggcaacg ttaatgcctt tgcccgccgc gtgcagaccc
     1141 gtggttttca ccaggttcac ttcgccgcgt tcgatttcag ggcaaaaccc aaccagatcg
     1201 taagccggat taagggtaat ggtggcgaca cgcctgctca ttatgcgccc tccccaagac
     1261 cggcggcgat cgcatcgcca atcgctttca gcgcctgttc agcatcttca ccctgcgcgg
     1321 taaagcgcag acgatggcct ttcttcacgc ctaatgccac cactttcatc agactacgtc
     1381 cgtttgccgg tttgccggtt ccatcaaggt ttgtcacggt aatttcactg ttaaattgtt
     1441 taatcgtatt caccagcatg gtgcccggac gggcatggag accatgctca ttacgcacta
     1501 caaattccgc gctcagtacg tcatccgtca gcgcatcatc actggtcagc aacgccagca
     1561 gcgtcgcggc gtcagcgctc agcagacgat cggctttatt gttcagcaac aggtcgccga
     1621 ggcgttttag cacggcaatc ggctgctcgt cgttcatcgc gacagtgact aataaggctg
     1681 ctttttcacc ctctacgtca aacgcctggg tcgcgcggct taccgcaaca gcactgcgca
     1741 aattgccttc cgcgctgtcg ttcagccaga tgccttgtcc cagattcatc ggactatcgt
     1801 taatcgtttt tgcgacgaac gccgcatcaa ccgctcccgc ctctttcaga cgcgccgcat
     1861 ttagcgcctg caatgtgacc agcgagctgg cgatgacatc cagcgtcatc gtctcgttat
     1921 caagttttaa ttgttcactt tgcttctcgc ccatcagcaa tgcgcgcagc tcttccgccg
     1981 ttgtcgcgga tttcagctgt tcagccacgg agtcatcgct cagcacatgc gtcagctgac
     2041 gcagcaggcc aaggtgttcg tccgaactgg cggcaatacc aatcgccacg taggcgacct
     2101 ggccttctcc ccaggtaacg ccctgcggaa attgaaagac ctggacgccg gttttcagca
     2161 cctgatcgcg cgtgtctgtt gtaccatggg gaatcgcaat accattgcca agaaaggttg
     2221 aggtttgctg ttcgcgcgcc agcataccgt caacatagcc gcccgccaca ttccccgcct
     2281 gcgctaacgc agcggcgatt tgccgaatgg cctcttcttt atttccggcc tgctcgcccg
     2341 gatgaatgtc ctgaaccgat aactggaaca tgtgtctcct ctcctgctga attgaaacga
     2401 ttcagccact atgagaaaaa aagcgccaat ctgagttatc aaaaaaacca gatcgcgctg
     2461 aaacgtttca agaaagtctg gatctttctg cttcagcacg caagaaaagt taccggtttt
     2521 gtagcaattt tttgaggtga agcacatttt ttctccaaca gaccctcaat agctgacgca
     2581 taaaaggctt cagctttttt ctttcagctt gcgtcagcac gcccttgtaa caaactggaa
     2641 tgctattttg atttttcgtg tcgattttga ttcagacgcc tgtttatttt ctgacgggca
     2701 gcgtaaactc cgcctctctt cacaccactg atatagaaac atgcacaaca gtcccgccgc
     2761 cgctgcgccc aaatcgtttg acctgacgtc taccgccttt ttgatcgtcg cttttctcac
     2821 cggtattgct ggtgcgttac agacgccgac actcagtatt tttctgacgg atgaggttca
     2881 cgcccgtccc ggcatggtgg gtttcttttt taccggcagc gcggttatcg gcattatcgt
     2941 gagccagttt ctggcgggtc gctcagataa aaaaggcgat cgcaaaaaac tgatcgtttt
     3001 ctgttgcgtg ctgggcatgt tggcctgcgt gttgtttgcc tggaaccgca actactttat
     3061 tttgctgttc atcggcgtct ttctcagtag cttcggctct accgccaacc cgcagatgtt
     3121 tgcgctggcc cgagaacatg ccgatcgtac aggtcgtgaa gcggtgatgt tcagctcaat
     3181 cctccgcgcc caggtctcgt tggcctgggt cattgggccg ccgctggcct atgcgctggc
     3241 gatgggtttt agctttacgg tgatgtattt gagcgcggcg gtagctttta tcgtctgcgg
     3301 cgtcatggtg tggttctttt taccgtcaat gcgcaaagat gcgccgctgg caaccggcac
     3361 gctggaagca ccgcgtcgta atcgccgcga tacgctgttg ctgtttgtca tctgtacgtt
     3421 aatgtggggg actaacagcc tgtatatcat taatatgccg ctgtttatca tcaatgagct
     3481 gcatcttccg gaaaaacttg caggcgtgat gatgggcacc gccgccgggc tggagattcc
     3541 cacaatgctg attgcaggtt acttcgccaa acggttggga aaacgcctgt taatgtgcat
     3601 cgccgttgtc gccggactgt gcttttatgc ggggatgttg ctggcgcacg caccggcaac
     3661 gttgctcggc ttgcagttgc tgaacgcgat ttacatcggc attcttggcg ggattggcat
     3721 gctctatttt caggatctca tgccaggcca ggcgggttca gccaccacgc tgtataccaa
     3781 taccattcgc gtcggctgga tcattgccgg ttcgttggcg ggaatcgccg cagaaatctg
     3841 gaattatcat gcggtcttct ggtttgcgtt agttatgatt gtcgccacca tgttctgcct
     3901 ggcgcgtatt aaagatgttt aacttgcaag cctgatactt ttactcttcg acacatttca
     3961 gcgcagaatt tatttctgcg cgatgttcat gcgcggtcat tcattgtctt tttctcaata
     4021 cgatattctg ttagcgccct cttacataag agaccggtta ttgagaaaat tacgcccatc
     4081 agcccgcaaa ggaccaacac cagccgcatc ttatattttg gtgtaacagc aacatctatc
     4141 acttcaatgt tagcattatt tttaaccgcc tccgacaaca aggatagctt tgtatatgtt
     4201 tccgtttgta acatattttt atgcacgcta taacgtttaa tgtcaccatc atcgatatac
     4261 catgctgcca ttttatcgac gctatttttc agggtggaaa taatattatt gacgctttct
     4321 tccctcccct gcgccttaaa aaggacaagc tgatttttcg cgtcaaaact tattttattt
     4381 ttatattccg caggcaagaa acggctaaac tggttaagga taaccgttgt tttacattga
     4441 atatcattag catagccaca taacgcatag gtagcaggcg tatccagatt aggtttgatt
     4501 gtaatactca caacctttgt atcatgatgc acgctcacaa aaacatagcc aatggcgaca
     4561 aaaataaagg tagcgatcac gatacttagc cattttctta taaggaataa ggaaacgtcg
     4621 actaaatcaa tttcactatt ttctccccgc atttcacatc ccttttaaaa cgctaatagt
     4681 caacccgaat actgaaataa caaaaagcaa caccagcgta aaaataaacg ccctggctgc
     4741 gaacgtatat ttcttcataa gataaaaccc acacataaga attcgagtat tttaaaggaa
     4801 aataacaaca cattcacact ggttatatcg atcggtaaat acatcaatga tagatataaa
     4861 ctatcaaact aatgatatcg atcgttataa ataattaaaa tcgatcaaaa ttcctctttt
     4921 taatagataa aaactatcat ataaataaaa ttgatcgctt ttgttttatg tgacggtttg
     4981 ttcggtacac gttcaggcac caacggggtt gagcggcgac atctaccgtt tcagaagaca
     5041 cgaaataagg gaagcatgta ttacgctatt taatggtaaa aggaggtaat ttgatgcgca
     5101 gcttttgcag actatttcgg gatataacgt aagcccctgc acgtttatca aaaacagctg
     5161 acttagagcc tatcccatta ggctattagc tcatggtaag gttttctgtt cgagttccag
     5221 caaataaata atggcctctt cccgggtcgt taaacacatg tcccctgtcg gttgcaaacc
     5281 agagcacact tttgggcgta aaggcgagcc aaagataaga cacaagttat cttccgaaag
     5341 ctgcacgcat ctggtattca tcggcttgcc attcggcatt ccgggtatcg gcgacgaaat
     5401 tgaaggcgca atacagcaag cgccacaacc gctacgacag tccatgctca gcccctctat
     5461 ttataaccaa atgaaagata acagaatttg tccaaagaaa aatccagatt taaaatgtgg
     5521 acgtcatcat gatcaggcct gtcctcagac attccgaaga caaggctgga aacagaaggg
     5581 acaacacagc acacttcccc cctccaggcg acatgccatc gcgtattctc gttgaacgcg
     5641 gagcggaaag cgggcgaaca gtatcacctt ttttgcacca gcaaaagtga caattccact
     5701 tgcctggacg gcccggcgcg agtagtttta cgcgatattt tagataatct ctacaacagg
     5761 atctcctcga tgccaagagc gaacgaaatc aaaaaaggta tggtactgaa ctacaacggc
     5821 aaattgctga ttgtgaaaga tatcgacatt cagtcgccta ccgcccgtgg cgccgccaca
     5881 ctgtataaaa tgcgcttttc cgatgtccgc accggtctga aagtggaaga acgtttcaaa
     5941 ggcgacgata tcgttgatac cgtcaccctg agccgtcgcg gcgttgactt ttcttatgtc
     6001 gatggcaacg aatatgtgtt catggataaa gaagactata cgccgtatac cttcaccaaa
     6061 gatcagattg aagaagagtt gctgtttatg cctgaaggcg gaatgccgga tatgcaggtt
     6121 ctgacctggg acggccaact gctggcgcta gagcttccgc agaccgtgga tctggaaatc
     6181 gtcgaaaccg cgccgggtat taaaggagcg tccgccagcg cacgtaacaa acccgcgaca
     6241 ttaagcaccg gtctggtgat tcaggttccc gaatacctga gcgcaggtga gaaaatccgc
     6301 attcatatcg aagagcgccg ttatatgggg cgcgcggatt aagtttcaca tttttcggct
     6361 gcgccccagg gcgcagtctg ccccttttat ttattgactg ttctgcacca ggcaagagaa
     6421 acgttaaaaa tttaacattt tctgctctta agatggcaga agcacgactt cgtcaactca
     6481 gcacttctct ttttcacgtt tattcgccag gattattaaa agttgttatg ttgtatcaat
     6541 attctggagc tgacgtgacc aaaaccaatc ttattactgg atttctcggt agcggaaaaa
     6601 ccacctctat ccttcattta ttagctcata aagatccggc tgaaaagtgg gccgtcctgg
     6661 ttaatgaatt tggtgaagtg ggtattgacg gcgcgctgct tgccgacagc ggcgcactgc
     6721 taaaagagat tcccggcggc tgcatgtgct gcgtcaacgg attgcctatg caggtggggc
     6781 tcaacacgct gctgcgccag ggcaaacctg accggttgct gattgaacca accggactgg
     6841 ggcacccaaa acagattctg gatttattaa ctgcgccggt ttatgagccg tggattgatt
     6901 tacgcgccac gctctgcatc ctggaccctc gcctgctact ggaccaacag agcgtcgcca
     6961 atgaaaattt ccgcgatcag ctcgcctcag ccgatattat catcgccaat aaaaccgacc
     7021 gcgccacggc gcagagcgat gccgccctgc aacagtggtg gcgacagtac ggcggcgatc
     7081 gtcaactgat tcatgccgaa catggacaga tagacggtaa gcttctggat ttaccgcgac
     7141 aaaatctggc ggaactgccg gccagcgccg cgcattctca cactcatgcc agtaaaaaag
     7201 gactcgccgc gctaaatctg cccgcacagc agcgctggcg acgcagcctc aatagcggac
     7261 agggtcatca ggcctgcggc tggattttcg atgccgatac cgtgtttgac accattggcc
     7321 tactcgaatg ggctcgtctg gcgccggtgg gccgggtgaa aggcgttatg cgcatacaag
     7381 aggggctggt acgcatcaat cgccagggcg atgacctgca catcgaaaca cagagtgtcg
     7441 cgccgccgga tagccgggtt gaacttatct caaacacaga aaccgactgg aatacgttac
     7501 agacggcctt gttgaagctt cgtttagcga cgcacgcgta aggttgccac cgtttaaaaa
     7561 ctatggcgaa atgacgatga aaacccgcta ttccttgata attctgctta atgccgccgg
     7621 tctggcgctg tttttgtcat ggtatcttcc cgtcaatcac ggtttctggt tcaccattga
     7681 ttccggcata ttccacttct ttaaccagaa actggtggaa agccacgcgt tcctctggtg
     7741 ggtcgctatt accaataatc gggcgtttga cggctgttcg ctgctggcga tgggcggact
     7801 gatgctcagt ttctggctaa aagaagacgc gtcgggccgg cggcgcattg tgataatcgg
     7861 attggtcatg ctgctaacag cggtggtgct taaccaactc ggtcaggcgc tgatccccgt
     7921 caagcgcgcc agtccaacgc tctcttttga gcatatttat cgcgtcagcg agttgctgca
     7981 catcccgaca aaagacgcgt caaaagacag tttcccaggc gatcacggta tgatgctgct
     8041 gatattttcc gcctttatgc tgcgttattt cggcaaaacg gcggggatta tcgcccttat
     8101 tatatttgtg gttttcgcgt ttccgcgcgt tatgattggc gctcactggt tcaccgatat
     8161 tgtggttggg tcgctcacgg ttattttgat tggcctcccc tggtggctga tgaccccgct
     8221 cagcgaccgg gcgatagcgc tttttgagga ttatctcccg ggcggaaata aacaaatttt
     8281 aaacaaataa cccatacaat taacattgcc ttcagcgata gttttacatc gttgaaggta
     8341 atttatgatg atattccccc agcccatcat ttttcggtaa tattattcct ctgcaaaatg
     8401 aacaggttgc acgattttta aacgatttgc gcttaatttg acccgtgctg atagctcact
     8461 tttcgtatca taaattctta taaaaaatca cgcgaaatcg ctcgcaatga cagcaacaat
     8521 cgggtaatct caaactcgtt ttgcctcgcc agataattat tctcattgcg aataaatttg
     8581 tgcgttccgc cacagatttg tgcacaaaga attgtctcaa gctgtgcagg taattagtct
     8641 catcacgttt ggcattttta taacgatatt tatcgttaag gacttcaagg gaaaacaaac
     8701 aacatggtca aatctcaacc gattttgaga tatattttgc gcgggattcc tgcgattgca
     8761 gttgcggttc tgctttctgc ttgtagcaca accaccaata ccgcaaagaa tatgcattct
     8821 gagacgcatg ctgtgggcaa tagcgatagc tcttcactgc aagcctctca ggatgaattt
     8881 gaaaatatgg tgcgtaacct cgacgttaag tcgcggatta tggatcagta tgctgactgg
     8941 aaaggtgtgc gttaccgcct gggcggcagc actaagaaag gcgtcgactg ttccagcttt
     9001 gtacagcgca ccttccgcga acagtttggt ttagagcttc cgcgttcaac ctatgaacag
     9061 caggaaatgg gcaaagcggt ttcacgcaat aacctgcgta cgggcgatct ggttctgttc
     9121 cgcgccggtt ccactggccg tcatgtcggt atttatatcg gcaataacca atttgtccat
     9181 gcgtctacca gtagcggcgt cattatctcc agtatgaacg aaccgtactg gaaaaaacgc
     9241 tacaatgaag cgcgtcgagt tctgagccgc agttaatctt catcaggcag cacctccctt
     9301 ggcttacctg atgagacgac ataaaaagca ctgcttcagc agtgcttttg cttattatcc
     9361 cttctgaacc cgttttaccg aatagcgacg tgtcgcctct tatccagcct acaacacacg
     9421 aacataggcc tgataaacat agcgccatca gacattcagg tcgtttccgc caacgactac
     9481 tgcgacaata cgctttcctg cgcatcacag aaaagcatga ctatccgggg taatccaggc
     9541 tatagtctta taaatcaacc agtttaaccg gcatctgcct tttcaggtca caccaggaat
     9601 tatgcttaca cgcgactcct cttccggtcg gaaaatcctg cttacctgta tcattacggg
     9661 gatagcggca gcattactta ttggtagcct gcaatttttc ctgtcgtggc ataaacggga
     9721 tgttaaatac aatacgctcc tttctgatgt acaacattac ctagccagct atttcgccga
     9781 cctgaaagcc accaccgata ttcttcagcc gttgacgatc aacacctgtc agcaggttgg
     9841 cgcagaactc acctcaagag ccgcttttag ccttaatgtc cgcgccttct tattgattaa
     9901 agataaaaaa gtgttctgct cttccgccac tggcgccatg aatatgccgc ttcagcaact
     9961 ggtaccggat atagatatcc gcaaagacgt tgctatggcg attctgcccg gcacgccaat
    10021 gatgcccaac aaaccgacaa tggtgatttg gtatcgaaac ccattattaa ataacagcgg
    10081 cgtattcaca tcgctgaata ttaacctgac gccctactta ctctatacca cgcgccagga
    10141 cgattttaac ggcatcgcgc tgattgtcgg caataccgcg ctgtcgacct tttcttcgcg
    10201 tctgctgacc gtcgcggagc tgccgggcac gccttcacga caggcaacta tcaacggcct
    10261 gccgcttaaa atacagcttt atgccgatag ctggacctac aatgacttgt ggtatgcgtt
    10321 gatgctgggc tgcattagcg gcatcgtagc ggggtttatc tgttacttta tctatgccct
    10381 ccggacgcga ccgggcaaag agattttaac ggcgatcaaa cacgagcagt tttatgtggt
    10441 ttatcagccc gtcgtcgata ctcgtacgct aagcgtcacc gggcttgaag tcttactgcg
    10501 ctggcgtcac cctacggcag gcgagattcc gccggatgcc tttatccact atgccgaagc
    10561 gcagcaactt atcgtaccgt taacgcagca tctgttcgag ctgatcgccc gcgacgcacc
    10621 cacgctacag aaggtgatgc ccgtcggtgc caaatttggc attaacatcg cgccggaaca
    10681 tctgcacagc gacagtttta aagaggatat gcaccggctc agggacgccc tgcccgcgca
    10741 ccattttcat atcgtgctgg aaatcactga acgcaatatg cttcagcagt atgaagcggc
    10801 caaactgttc gaatggctgc attccgccgg gtttgaaatc gctatagatg atttcggtac
    10861 aggccatagc gccctgattt atctggagcg atttacttta gattatctga aaattgatcg
    10921 cggctttatc caggcgatcg gcacggaaac cgtcacgtct ccggttctgg ataccgtgct
    10981 gacgctctcc agacgcctga atatgctgac ggtggccgag ggcgttgaaa cgccggagca
    11041 ggcccgttgg ctacgcgatc acggtgttaa ttacttgcag gggtactgga ttagccgtcc
    11101 tttaccccta aaagatttcg tgctgtggat gtcggcgcct tccgtgcctg aatggtagtc
    11161 cccttacggt tttaacggat tcacatcaga cgcaacgtca cttattattc agcgaaacgc
    11221 ctgccggttt gcagcgggca atacgataag gaaaccgcct tcagatgatt gcgcgcgtaa
    11281 tgcttctgct tgtcgcactg gttagcgctg gcgcccaggc ccaggaaatc aaagaaagct
    11341 acgctttcgc cgtactcggc gaacctaagt atgcttttaa ctttgatcac tttgattatg
    11401 tgaatcctgc tgcgccgaaa ggcggtcaga tgacgctttc cgccattggt acgttcgata
    11461 atttcaatcg ctattcgctg cgcggcaatc ccggcgtacg taccgaagcc ctttacgata
    11521 cgctttttac cacctcggat gatgaacccg gaagctatta cccgctgatt gccgaccatg
    11581 cccgctatgc cgccgactat tcctgggtgg aaatctcgat taacccccgc gctcgttttc
    11641 acgatggcac gcccattacc gcccgcgatg tagcctttac ctttcataag tttatgaccg
    11701 aaggcgtacc gcagttccgt ctggtctata aaggtactac cgtgaaggcg attgcgcctt
    11761 taaccgtgcg aattgagctg gcgaagcctg gtaaagaaga catgcttagt ctgttttcac
    11821 taccgatcat gcccgaaaaa ttctggaaaa atcacaaact cagcgatcca ctttcaacgc
    11881 cgcccttagc cagcgggcca taccggatta ctcagtggaa aatgggccag tacattgtct
    11941 attcacgcgt caaaaactac tgggcggcta atctgccggt caatcgtgga cgttttaacc
    12001 tcgacactgt ccgctacgat tactaccttg atgacaatgt cgctttcgag gcgtttaaag
    12061 cgggcgcatt tgatctacgg ctggaaaacg acgctaaaaa ctgggcaacg cgctatatcg
    12121 gtaaaaattt cgataatcat tacatcatta aagaagagca gaaaaacgag tcggcgcagg
    12181 acacacgctg gctggccttt aatattcagc gcccggtatt taaagaccgg cgggtacgtg
    12241 aagccgtcac cctggccttc gattttgagt ggatgaataa agcgctgttc tataatgcct
    12301 ggagccgaac caacagttac ttccagaata ccgagtacgc cgccagaaat tatcctgacg
    12361 ccgacgaact ggtattactc gcgccgatga aaaaagatct tcctcctgaa gtcttcactc
    12421 agatctatca gccgccggtc tctaacggcg acggctacga tcgcgaaaat cttcttaaag
    12481 ctgacgcctt gttgacgcag gccggatggg tgatcaacgg acagcaacgg gtcaatagcg
    12541 tcaccggtaa gcctctgacg tttgaacttc tccttcctgc cagcagtaat agccagtggg
    12601 ttctgccctt ccagcataat cttcagcgtc tgggcattac gatgactatc cgtcaggttg
    12661 ataattctca actcaccaac cggatgcgta gccgcgacta tgacatgatg ccgaggctat
    12721 ggcgggcgat gccctggccc agctccgatc tacaaatctc atgggcgtcg gaatacattg
    12781 actccagtta taacgctccc ggcgtacaaa gcccggtggt ggataagctg atcgcgcaaa
    12841 ttatcgcagc gcagggtgat aaagcgaaac tggtgccgct gggacgggcg ctggatcgcg
    12901 tgctgacctg gaactattac atgctgccga tgtggtatat ggcgcaagac aggctcgcct
    12961 ggtgggataa attctcccat ccggcgattc gcccggtata taccatcggg ttagatacct
    13021 ggtggtatga tgtcaacaaa gccgccaagc taccggcagc caggaggtag taagaatcaa
    13081 tgggtgccta tcttatccgc cgtctgttac tggtgatccc cacgctatgg gccattatta
    13141 ccattaactt ttttatcgtg cagatcgctc ccggcggccc tgtcgatcag gctattgccg
    13201 cgattgaatt tggtcagggc ggcgcg
//
LOCUS       DAGWFR010000112        13107 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.114, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000112 DAGWFR010000000
VERSION     DAGWFR010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 13107)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13107)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13107
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.114"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..382)
                     /locus_tag="MOX77_003172"
     CDS             complement(<1..382)
                     /locus_tag="MOX77_003172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HCA3358627.1"
                     /translation="MAGLKLQAVTKSWGGKTQVIQPLTLDVADGEFIVMVGPSGCGKS
                     TLLRMVAGLERVTSGDIWIDRKRVTEMEPKDRGIAMVFQNYALYPHMSVEENMAWGLK
                     IRGMSKAHIEERVREAARILELDGL"
     gene            complement(385..1230)
                     /gene="ugpE"
                     /locus_tag="MOX77_003173"
     CDS             complement(385..1230)
                     /gene="ugpE"
                     /locus_tag="MOX77_003173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000572177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter permease
                     UgpE"
                     /protein_id="HCA3358628.1"
                     /translation="MIENRRGLTIFSHTMLILGIAVILFPLYVAFVAATLDDRAVFET
                     PMTLLPGTQLLENIKTIWVNGVGVNSAPFWLMMLNSFIMAFSITVGKITVSMLSAFAI
                     VWFRFPLRNLFFWMIFITLMLPVEVRIFPTVEVIANLKMLNSYAGLTLPLMASATATF
                     LFRQFFMTLPDELVEAARIDGASPMRFFRDIVLPLSKTNLAALFVITFIYGWNQYLWP
                     LLIITDVNLGTAVAGIKGMIATGEGTTQWNQVMAAMLLTLIPPVVIVLAMQRAFVRGL
                     VDSEK"
     gene            complement(1227..2114)
                     /gene="ugpA"
                     /locus_tag="MOX77_003174"
     CDS             complement(1227..2114)
                     /gene="ugpA"
                     /locus_tag="MOX77_003174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000099274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter permease
                     UgpA"
                     /protein_id="HCA3358629.1"
                     /translation="MSSSRPVFRSRWLPYLLVAPQLVITVIFFIWPAGEALWYSLQSV
                     DPFGFSSQFVGLENFVALFHDSYYLDAFWTTIKFSALVTFSGLLVSLFFAALVDYVVR
                     GSRFYQTLMLLPYAVAPAVAAVLWIFLFNPGRGLITHFLGEFGYDWNHAQNSGQAMFL
                     VVFASVWKQISYNFLFFFAALQSIPRSLVEAAAIDGAGPIRRFFRLSLPLIAPVSFFL
                     LVVNLVYAFFDTFPVIDAATAGGPVQATTTLIYKIYCEGFTGLDLSASAAQSVVLMFL
                     VIILTVVQFRYVESKVRYQ"
     gene            complement(2219..3535)
                     /gene="ugpB"
                     /locus_tag="MOX77_003175"
     CDS             complement(2219..3535)
                     /gene="ugpB"
                     /locus_tag="MOX77_003175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter
                     substrate-binding protein UgpB"
                     /protein_id="HCA3358630.1"
                     /translation="MISLRHTALGLALSLAFTGQALAVTTIPFWHSMEGELGKEVDSL
                     AQRFNQANPDYKIVPVYKGNYEQNLSAGIAAFRTGNAPAILQVYEVGTATMMASKAIK
                     PVYEVFKDAGINFDESQFVPTVAGYYTDAKSGHLLSQPFNSSTPVLYYNKDAFKKAGL
                     DPEQPPKTWQELADYTAKLRAAGMKCGYASGWQGWIQLENFSAWNGLPFASKNNGFDG
                     TDAVLEFNKPEQVKHIALLEEMNKKGDFSYVGRKDESTEKFYNGDCAMTTASSGSLAN
                     IRQYAKFNYGVGMMPYDADIKGAPQNAIIGGASLWVMQGKDKETYTGVAKFLDFLAKP
                     ENAAEWHQKTGYLPITTAAYELTREQGYYDKNPGADIATRQMLNKPPLPFTKGLRLGN
                     MPQIRTIVDEELESVWTGKKTPQQALDTAVDRGNQLLRRFEKASKS"
     gene            complement(3767..4045)
                     /locus_tag="MOX77_003176"
     CDS             complement(3767..4045)
                     /locus_tag="MOX77_003176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000621258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358631.1"
                     /translation="MIRSGACIMGTLLFAASFSVNALTSNDFDPRDPAIWQEETATPY
                     PLAATTCEVRHHPDCATWEDEKSDIQRERERRDQRRLQNLYKKYSHRD"
     gene            complement(4209..4922)
                     /gene="livF"
                     /locus_tag="MOX77_003177"
     CDS             complement(4209..4922)
                     /gene="livF"
                     /locus_tag="MOX77_003177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="high-affinity branched-chain amino acid ABC
                     transporter ATP-binding protein LivF"
                     /protein_id="HCA3358632.1"
                     /translation="MEKTMLTFEKVSAHYGKIQALHDVSLHINQGEIVTLIGANGAGK
                     TTLLGTLCGDPRASSGRVVFDGKDITDWQTAKIMREAVAIVPEGRRVFSRMTVEENLA
                     MGGFFAERDRFQERIKWVYELFPRLHERRIQRAGTMSGGEQQMLAIGRALMSQPRLLL
                     LDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLS
                     DTGDALLANEAVRSAYLGG"
     gene            complement(4924..5691)
                     /gene="livG"
                     /locus_tag="MOX77_003178"
     CDS             complement(4924..5691)
                     /gene="livG"
                     /locus_tag="MOX77_003178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000084170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="high-affinity branched-chain amino acid ABC
                     transporter ATP-binding protein LivG"
                     /protein_id="HCA3358633.1"
                     /translation="MSQPLLAVNGLMMRFGGLLAVNNVSLELREREIVSLIGPNGAGK
                     TTVFNCLTGFYKPTGGTITLRERHLEGLPGQQIARMGVVRTFQHVRLFREMTVIENLL
                     VAQHQQLKTGLFSGLLKTPAFRRAQSEALDRAATWLERIGLLEHANRQASNLAYGDQR
                     RLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNHHNTTILLIEHDMKLVM
                     GISDRIYVVNQGTPLANGTPEEIRNNPDVIRAYLGEA"
     gene            complement(5688..6965)
                     /gene="livM"
                     /locus_tag="MOX77_003179"
     CDS             complement(5688..6965)
                     /gene="livM"
                     /locus_tag="MOX77_003179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched chain amino acid ABC transporter
                     permease LivM"
                     /protein_id="HCA3358634.1"
                     /translation="MKPMHIAMALFSAAMFFVLAGVFMGVQLELDGTKLVVDTAADIR
                     WQWIFIGTAVVFFFQLLRPMFQKAVKHVSGPKFILPAIDGSTVKQKLFLMALLVIAVA
                     WPFMVSRGSVDIATMTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYY
                     GLGFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGG
                     PNGISQIPKPTLFGLEFSRNTREGGWDTFSNFFGVKYDPSDRVIFLYLVALLLVVLSL
                     FVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLFAARQ
                     GFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEYSMLMLGG
                     LMVLMMIWRPQGLLPMTRPQLKLKSGQAKGEQA"
     gene            complement(6962..7888)
                     /gene="livH"
                     /locus_tag="MOX77_003180"
     CDS             complement(6962..7888)
                     /gene="livH"
                     /locus_tag="MOX77_003180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010436488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="high-affinity branched-chain amino acid ABC
                     transporter permease LivH"
                     /protein_id="HCA3358635.1"
                     /translation="MSEQFLYFLQQMFNGVTLGSTYALIAIGYTMVYGIIGMINFAHG
                     EVYMIGSYVSFMIIAALMMMGIDTSWLLVAAGFIGAIIIASAYGWSIERVAYRPVRNS
                     KRLIALISAIGMSIFLQNYVSLTEGSRDVALPSLFNGQWIVGSSENFSASITTMQAVI
                     WIVTFLAMLALTIFIRYSRMGRACRACAEDLKMASLLGINTDRVIALTFVIGAAMAAV
                     AGVLLGQFYGVINPYIGFMAGMKAFTAAVLGGIGSIPGAMIGGLILGVAEALSSAYLS
                     TEYKDVVSFALLILVLLVMPTGILGRPEVEKV"
     gene            complement(7948..9057)
                     /gene="livK"
                     /locus_tag="MOX77_003181"
     CDS             complement(7948..9057)
                     /gene="livK"
                     /locus_tag="MOX77_003181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="high-affinity branched-chain amino acid ABC
                     transporter substrate-binding protein LivK"
                     /protein_id="HCA3358636.1"
                     /translation="MKRKAKTIIAGIVALAVSQGAMADDIKVAIVGAMSGPVAQWGDM
                     EFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIQYVIGHLCS
                     SSTQPASDIYEDEGILMISPGATNPELTQRGYQYIMRTAGLDSSQGPTAAKYILETVK
                     PQRIAIIHDKQQYGEGLARSVQDGLKQGNANIVFFDGITAGEKDFSALIARLQKENID
                     FVYYGGYYPEMGQMLRQARANGLKTQFMGPEGVGNASLSNIAGGAAEGMLVTMPKRYD
                     QDPANKAIVEALKADKKDPSGPYVWITYAAVQSLATAMTRSASHAPLDLVKDLKANGA
                     DTVIGPLKWDEKGDLKGFEFGVFQWHADGSSTVAK"
     gene            9479..9862
                     /gene="panM"
                     /locus_tag="MOX77_003182"
     CDS             9479..9862
                     /gene="panM"
                     /locus_tag="MOX77_003182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase autocleavage activator
                     PanM"
                     /protein_id="HCA3358637.1"
                     /translation="MKLTILRLEHFSAQDQIDLGKIWPEYSASSLSVDETHRIYAARF
                     NERLLGAVRVTLSGTQGALDSLRVREITRRRGVGQYLVEEVIRDNPNVSSWWMADVGV
                     EDRSVMAAFMQALGFTAQHDGWEKR"
     gene            9840..9974
                     /locus_tag="MOX77_003183"
     CDS             9840..9974
                     /locus_tag="MOX77_003183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358638.1"
                     /translation="MTAGRSAKRKPDGADAYPAYMPGEKIKTTSQFSKNFALQAGGKL
                     "
     gene            complement(10058..11161)
                     /gene="livJ"
                     /locus_tag="MOX77_003184"
                     /pseudo
     CDS             complement(10058..11161)
                     /gene="livJ"
                     /locus_tag="MOX77_003184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026223.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="branched chain amino acid ABC transporter
                     substrate-binding protein LivJ"
     gene            complement(11483..12337)
                     /gene="rpoH"
                     /locus_tag="MOX77_003185"
     CDS             complement(11483..12337)
                     /gene="rpoH"
                     /locus_tag="MOX77_003185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoH"
                     /protein_id="HCA3358639.1"
                     /translation="MTKEMQNLALAPVGNLESYIRAANAWPMLSADEERALAERLHYQ
                     GDLEAAKTLILSHLRFVVHIARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLV
                     SFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARE
                     LGVSSKDVREMESRMAAQDMTFDMSSDDESDSQPMAPVLYLQDKSSNFADGIEDDNWE
                     EQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMK
                     KLRAAIEA"
     gene            complement(12583..>13107)
                     /gene="ftsX"
                     /locus_tag="MOX77_003186"
     CDS             complement(12583..>13107)
                     /gene="ftsX"
                     /locus_tag="MOX77_003186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsX"
                     /protein_id="HCA3358640.1"
                     /translation="KLDFQSTASLNTLRDRISQINGIDEVRMDDSWFARLAALTGLVG
                     RVSAMIGVLMVAAVFLVIGNSVRLSIFARRDTINVQKLIGATDGFILRPFLYGGALLG
                     FSGAFLSLILSEILVMRLSSAVTEVAQVFGTKFDLNGLSFDECLLLLLVCSMIGWIAA
                     WLATVQHLRYFTPD"
BASE COUNT         3144 a         3730 c         3341 g         2892 t
ORIGIN      
        1 gcaggccgtc cagctccaga atgcgcgccg cctcccgcac gcgttcttca atatgcgctt
       61 tgctcatacc gcgaattttc agcccccacg ccatgttctc ctctacgctc atatggggat
      121 agagagcata gttctgaaat accatcgcga tgccgcgatc tttgggctcc atctcggtga
      181 cccgtttgcg atcaatccag atatcgccgc tggtcacgcg ttccagaccg gccaccatcc
      241 gcaacaacgt tgatttgccg cagccggacg gcccgaccat cacgataaat tcgccatccg
      301 ccacgtccag cgtcagcggt tgaatgacct gggttttgcc gccccagctt ttggttactg
      361 cctgtagttt taaaccagcc atttttattt ctcactgtcc actaaaccac gcacaaacgc
      421 ccgttgcatg gctaacacaa ttacgaccgg gggaatcaga gtcagcagca ttgccgccat
      481 cacctggttc cattgcgtgg taccttcgcc agtggcgatc atccctttga tacccgctac
      541 ggcagtgcca agattcacgt cggtgataat caacagcggc cacagatact ggttccagcc
      601 gtagataaag gtgatgacga ataacgccgc caggttggtt tttgacagcg gcaacacgat
      661 gtcgcggaaa aagcgcatcg gcgacgcgcc gtcaatacgg gccgcctcca ccagttcatc
      721 cggaagcgtc atgaagaatt gacgaaacag gaaagtggcg gtagcggacg ccatcagcgg
      781 taacgtcaga ccggcatagc tgttgagcat tttcaggttg gcgatcactt ccaccgtcgg
      841 gaagatacgc acttcaaccg gcaacatcag ggtgataaaa atcatccaga agaacaggtt
      901 acgcagggga aaacgaaacc agacgatggc gaatgcggaa agcatagata ccgtgatttt
      961 gcctaccgta atgctgaacg ccataatgaa actgttaagc atcatcagcc agaatggcgc
     1021 gctattaaca ccgacgccgt tgacccaaat agttttgata ttctccagta actgcgtgcc
     1081 gggaagcagc gtcatcggcg tctcaaacac cgcgcggtcg tccagcgtcg ccgcgacaaa
     1141 cgcgacatac agcggaaaca aaatgaccgc gatccccaga atcagcatgg tatggctgaa
     1201 tattgtcagc ccgcgacgat tctctatcat tggtaacgca ccttactttc cacatagcgg
     1261 aactgcacca ccgtcagaat gatgacgagg aacatcaaca ccaccgactg cgcggcggac
     1321 gccgagagat ccaggccggt aaacccttcg caataaatct tataaatcag cgtcgtggtg
     1381 gcttgtaccg gcccgccggc ggtcgcggcg tcaatcaccg ggaaggtgtc gaaaaaggca
     1441 tacaccaggt tgaccaccag caggaagaaa ctgaccggcg caataagcgg caaagaaagc
     1501 cggaagaaac gacgaatcgg cccggcgccg tcaatggccg ccgcttccac cagcgagcgg
     1561 ggaatagatt gcagcgcggc aaagaagaat aaaaagttgt aactaatctg cttccagact
     1621 gacgcaaata ccaccaggaa catcgcctga ccgctgtttt gcgcgtggtt ccagtcatag
     1681 ccgaattcgc cgaggaaatg ggtgattaat ccccgccccg ggttaaacag gaaaatccac
     1741 aatacggcgg cgacggcggg cgcgacggca taaggcagca gcatcagcgt ctgataaaaa
     1801 cggctgccgc gcaccacgta atccaccagg gcggcgaaaa acaatgagac cagcaggccg
     1861 ctaaacgtga ccagcgcgct gaatttaatc gtcgtccaga aggcgtcgag ataataactg
     1921 tcgtgaaaaa gcgcgacgaa attctccagc ccgacaaatt ggctggaaaa accaaacgga
     1981 tcgacgcttt gcagcgaata ccacagcgct tcgcccgcag gccagataaa gaaaataacg
     2041 gtgataacca actgcggagc aaccagtaaa tacggcagcc agcgcgagcg gaacaccgga
     2101 cgggatgatg acatgaaggt tcttttcctg gaaggtgccg gatggcggtg caagcacctt
     2161 atccggccta caaacgctgt aggcctgata agcgcagcgc catcaggcac ttatacactt
     2221 aagatttgct cgctttctca aaacgacgca gtaactgatt cccgcgatcc accgcggtat
     2281 ccaacgcctg ttgtggggtt ttcttcccgg tccagacgct ttccagctct tcgtccacga
     2341 tggtacgaat ctgcggcata ttgcccagac gcaagccttt ggtgaagggt aacggcggct
     2401 tattcaacat ctggcgagtg gcgatatccg caccggggtt tttatcgtaa taaccctgct
     2461 ctcgggtcag ctcgtaggcg gcggtggtaa tcggcaggta gccggttttt tgatgccatt
     2521 cagcagcgtt ttccggtttt gccaggaagt cgaggaattt ggcgacgccg gtataggttt
     2581 ctttatcttt accctgcatg acccataggc tggctccgcc gataatggcg ttttgcggcg
     2641 cgcccttgat atcagcgtca tacggcatca tacccacgcc atagttaaat ttggcatact
     2701 ggcggatatt ggcgagcgag ccggaggacg cggttgtcat cgcgcagtca ccgttataaa
     2761 acttctcggt agactcgtcc ttacgcccaa catagctaaa atcgcctttc ttattcatct
     2821 cttccagcag cgcgatatgt ttcacctgct ctggcttatt aaactccagc accgcatctg
     2881 taccgtcaaa gccattgttt ttactggcga aggggagacc gttccaggcg ctgaagtttt
     2941 ccagttggat ccagccttgc cagccgctgg cgtaaccgca tttcatgcct gccgctctca
     3001 atttcgcggt atagtcagcc agctcctgcc aagttttcgg cggctgctcc ggatctaaac
     3061 cggctttctt aaaggcgtct ttgttgtagt acagtaccgg cgtggagctg ttaaagggct
     3121 gggagagcag atgcccgctt ttagcatcgg tgtagtagcc tgcaacggtt ggtacaaact
     3181 gggactcgtc aaagttaata ccggcgtctt taaacacttc ataaaccggc ttaatggctt
     3241 tcgaggccat catggtcgct gtcccaacct cataaacctg caatattgcc ggcgcgttgc
     3301 cggtacggaa tgccgcgatc ccggcgctca ggttctgttc atagttcccc ttatagaccg
     3361 gaacgatttt gtaatccgga ttggcctggt tgaaacgttg cgccagtgaa tcaacttctt
     3421 tgcctaactc cccttccatt gaatgccaga atggaatagt ggtgacggcc aacgcctgac
     3481 ccgtaaatgc cagactcagc gccagtccta aagctgtatg tcgtaacgat atcatcggtt
     3541 atctctcttt ttgtgccggg atgcgcgata tcacgcgttt tatgttcgcg ggggtaacat
     3601 gacatgctcg aatgacagaa aaataacttt tttattacaa aaaaagatag taaggcgaca
     3661 gagagatggc aaggcagtga aagcgccgga aaagaaaagt gggagctacg gcacgtctga
     3721 cagcgtaatg ctgaccagac atgcgttatt tggctggcgt cagcagttaa tcacgatgag
     3781 aatacttttt gtacagattt tgtaagcgcc gctgatctcg ccgctcgcgt tcacgctgaa
     3841 tgtcggattt ttcatcctcc cacgttgcac aatccggatg atgacgcact tcgcaggtcg
     3901 ttgcggccag tggataaggc gttgcggttt cttcttgcca gatagcagga tcgcggggat
     3961 caaaatcgtt tgaggttaag gcgttaacac tgaacgaagc cgcgaacaac agcgttccca
     4021 ttatgcaggc gcctgaacgt atcatccttg ctccttcttc ggtggttata gttgataact
     4081 attctcaact ataacatatt ggtacgaaaa atgttctact gatttgccga atgccgagta
     4141 atccgccagg tccggtaagc ggtagcgcca ccgggcgcgt ttgccagatg gcagctgtaa
     4201 actgcgcctt atccgcccag ataggcgctg cgcaccgctt cgttcgccag cagcgcatca
     4261 ccggtatcgg atagcaccac gtggccgttt tccagcacat aaccgcggtc ggcgagcttc
     4321 agcgcctggt tagcgttttg ctcgacaagg aagatggtca taccctgctc gcgcaactgc
     4381 tcaatggtgt cgaagatctg ctggatgatg atcggcgcca gccccagcga cggttcatcc
     4441 agcagcaaca ggcgcggctg gctcatcagc gcgcgaccaa tcgccagcat ctgctgttcg
     4501 ccgccggaca tggtgcccgc tcgctggata cggcgttcat gcaggcgcgg aaacagctcg
     4561 tacacccatt tgatacgctc ctgaaaccga tcgcgctcgg caaaaaaacc gcccatcgcc
     4621 aggttctctt ccaccgtcat ccgcgagaag acgcgccgcc cttccggcac tatcgccacc
     4681 gcttcacgca tgattttcgc cgtctgccag tcggtgatgt ctttaccgtc aaacaccacc
     4741 cgtccgctgg aggcgcgcgg atcgccgcac aaggtgccaa gcagcgtcgt tttccccgcg
     4801 ccgttagcgc caatcagggt aacgatttcc ccctggttga tgtgcagact gacgtcgtgc
     4861 agcgcctgaa tcttgccgta gtgggcgctg actttttcaa acgttaacat cgttttttcc
     4921 atcttatgcc tcacccagat aagcgcggat gacgtccggg ttgttgcgga tctcttccgg
     4981 cgtgccgttc gccagcggcg tgccctggtt caccacgtaa atgcgatcgg aaatgcccat
     5041 caccagcttc atatcgtgtt caatcagcaa gatagtggtg ttgtgatggt tacgtagttc
     5101 ggcaatcagc tcatccagct ctttggtctc tttcgggtta aggccggccg ccggttcgtc
     5161 gagcatcaga atttctggct gcgtcaccat gcagcgggca atctccagcc ggcgctggtc
     5221 gccgtaggcc agattactgg cctggcggtt ggcatgttcc agcaggccaa tacgctcaag
     5281 ccaggtcgcc gcgcggtcca gcgcttcact ttgcgcgcgg cggaaagcgg gcgttttcaa
     5341 caggccggaa aagaggcccg ttttcagttg ctggtgctgc gccaccagca ggttttcaat
     5401 caccgtcatt tcgcgaaaca ggcgcacatg ctggaaagtg cgtaccacgc ccatgcgggc
     5461 gatctgctgg cccggcaatc cttccagatg ccgctcgcgc aacgtgatcg taccgcctgt
     5521 cggcttataa aaaccggtca ggcagttaaa caccgtcgtt ttacccgcgc cgttagggcc
     5581 aatcagcgac acaatttccc gctcacgcaa ttccagcgat acattgttga ccgccagcaa
     5641 accgccaaag cgcatcatca ggccgttaac cgctaataat ggctgactca tgcctgctct
     5701 cctttcgcct gaccactttt cagcttcaac tgcggacgcg tcatcggcag caatccctgc
     5761 gggcgccaga tcatcatcaa caccattaaa ccgccgagca tcaacatgct gtattcgttg
     5821 aaatcgcgca tcaactcgcg cgacaccacc aacagaaccg ccgccaggat caccgcaaac
     5881 tgcgagccca ttccgcccag caccacaatc gccagcacga aggcggattc ggcgaaagtg
     5941 aaggattccg ggctgacaaa gccctggcgg gcggcaaaca acgtcccggc gaaaccggca
     6001 aacgcggcgc tgatagtaaa agcggtcagc ttgatgcgcg tcgggcttaa acctaatgag
     6061 cgacaggcga tctcatcttc acgcaacgct tcccacgccc ggcccagcgg catacgcagc
     6121 aggcggttaa tgacaaacag cgacaggacc accagcaaca gggccaccag atagaggaaa
     6181 atgacccggt cggatgggtc gtacttcacg ccaaagaaat tgctgaaggt atcccagccg
     6241 ccttctcggg tgttgcggct aaactccaga ccaaacagcg tcggtttggg gatctggctg
     6301 atgccgttcg ggccgccggt aatttcagtg ttgttgagca acaggatacg gacgatttcg
     6361 ccgaagccga gcgtcacaat cgccagatag tcgccgcgca ggcgcagtac cgggaagccg
     6421 agcaggaaac cggcggcggc ggagaccagt cccgccagcg gcaggcaggt ccagaaaccc
     6481 aaaccgtaat agtggttaag cagcgcaaag gtataagcgc cgatggcgta aaagccgccg
     6541 tagcccaata ccagcaggcc ggacagcccc accaccacgt tcagccccag accgaggatg
     6601 atataaatca tggtcatagt ggcgatatcg acgctaccgc gcgacaccat aaacggccac
     6661 gccacggcga taaccaacag cgccatcaga aacagctttt gcttaacggt agagccatcg
     6721 atcgccggca gaataaactt cggtccggag acgtgcttca ccgctttctg gaacatcgga
     6781 cgcagcaact gaaagaaaaa aaccactgcc gtaccgataa agatccactg ccagcggatg
     6841 tcggcggcgg tatccaccac cagtttggtg ccgtccagct ccagttgtac gcccataaag
     6901 acgccagcca gaacgaagaa catcgccgca gagaacagag ccatcgcaat atgcatcggt
     6961 ttcatacttt ctctacctcc ggacgcccca ggataccggt cggcatcacc agcagtacca
     7021 gaatcagcag agcgaacgac acgacatctt tatattcggt acttaaatat gcagacgaga
     7081 gcgcttcggc gacgcccaaa atcagaccgc cgatcatcgc gcccggaatg ctgccaatac
     7141 cgcccagcac cgccgcggtg aacgctttca tcccggccat aaaaccgatg taggggttaa
     7201 tcacgccata gaactgaccg agcagcacgc ccgccaccgc cgccattgcc gcgccgataa
     7261 caaacgttag cgcaatgacg cggtcggtat taatgccgag caggctggcc attttcagat
     7321 cctccgcgca ggcgcggcag gcgcggccca tccgggagta gcgaatgaaa atggtgagcg
     7381 ccagcatagc cagaaaggtg actatccaga taaccgcctg catggtggtg atggacgcgg
     7441 aaaagttttc gctgctgccc acaatccact ggccgttaaa caggctgggt aacgccacgt
     7501 cgcgcgaacc ttccgtcagg ctgacgtagt tttgcagaaa gatggacatc ccgatggcgg
     7561 aaatcagggc gatcaggcgc ttggaattgc gcacaggccg gtaagcgact cgctcgatac
     7621 tccagccgta ggcgctggca ataataatcg cgccgataaa tccggcggcc accagtagcc
     7681 aactggtgtc tattcccatc atcattagcg cggcgatgat cataaaagag acgtagctgc
     7741 cgatcatata cacctcgcca tgagcgaagt tgatcatgcc gataatgccg tacaccatcg
     7801 tataaccgat agcaatcagc gcgtaggtgc tccccagcgt gacgccgtta aacatctgct
     7861 gcaagaaata gagaaactgc tcggacataa ggtaaccttt ttaaacccgc ccggcgtgcg
     7921 ggcggtggga taacttatct tctggcatta cttcgcgacg gttgacgagc cgtcggcgtg
     7981 ccactggaag acgccaaatt caaatccctt aagatcgcct ttttcatccc atttcagcgg
     8041 cccaataacg gtatcagccc cgttcgcttt aagatctttc accagatcca gcggagcatg
     8101 gctggcgcta cgcgtcattg cggtcgccag cgactggacg gcggcgtagg tgatccagac
     8161 atacggaccg ctgggatctt tcttgtcggc tttcagcgcc tcgacaatcg ctttattcgc
     8221 cgggtcctgg tcataacgtt ttggcatcgt caccaacatg ccttccgccg caccgcccgc
     8281 aatattggac agcgacgcgt tacccacgcc ttccggcccc ataaattgcg ttttcaggcc
     8341 attagcccgc gcctggcgca gcatctgccc catttccggg tagtagccgc cgtaatacac
     8401 aaagtcgata ttctcttttt gcaagcgagc aatcagggcg gagaaatctt tttcgccggc
     8461 ggtaatacca tcaaaaaaga caatattggc attgccctgc ttcaggccat cctgcacgga
     8521 gcgcgccagt ccttcgccgt attgctgttt atcgtgaatg atagcgatgc gctgcggttt
     8581 caccgtttcc aggatgtatt tcgcggccgt tggcccctgg gaggagtcca ggccggcggt
     8641 acgcataatg tactgatagc cgcgctgggt cagctccggg ttagtcgccc ccggggagat
     8701 catcagaata ccttcatctt catagatatc ggatgctggc tgagtagaag aagaacacaa
     8761 gtgaccaata acgtactgaa taccgtcgtt aacgattttg ttggccaccg ccaccgcctg
     8821 ttttggatcg caggcatcat cgtactctac gccgaccagc ttatcgcctt taataccgcc
     8881 tttagcattg atgtctttaa tggcctggcg cgcgccgtta aattccatat cgccccattg
     8941 cgctaccggg ccggacatcg ccccgactat ggcgacttta atatcatctg ccattgcccc
     9001 ctgcgagact gctaatgcaa caatccctgc gattattgtt ttcgctttcc gtttcatgtg
     9061 cctgtatccc cattcgtgat gttatatgtt ttgtttttta ctggttaaaa agcagactgt
     9121 actttttata aatggtgcgc tttttactga ctcattaatg agttagcgca gcatttaaag
     9181 cataataaga ttaaaatctc tatttttcag tctattaaga aaatataata ttctgctttt
     9241 cgttatagat aaacaaaaaa aagcacgctt gtcagcataa aataacggca cattaagcgg
     9301 aataattcac tagcattcag ggaattatgc tgcctgtttt ccattctcta atgcttcaaa
     9361 ctgtaattat cgttgttaaa aaattaataa cctggtaaat gacacaaaaa agagaaagca
     9421 tctggcctgc ctgtttcggt acactgatcg catcttttga aatcgggaca agccgtcgat
     9481 gaagctgacc attcttcgtt tagaacactt tagcgctcag gatcagatcg atctgggcaa
     9541 aatctggccg gaatattccg cctcctcatt aagcgtagat gaaacgcacc ggatttatgc
     9601 cgcgcggttt aacgagcgtt tgttgggcgc cgtaagagtg acgctgagcg gaacgcaggg
     9661 cgcgctggat tccttacgcg tgcgtgaaat cacccgtcgc cgcggcgtcg ggcaatacct
     9721 ggtagaagag gtcatccgcg ataatcccaa cgtctcgtcg tggtggatgg cggatgtcgg
     9781 tgttgaagac cgcagcgtga tggccgcgtt tatgcaggcg ttaggtttta ccgcccagca
     9841 tgacggctgg gagaagcgct aaaagaaagc cggatggcgc tgacgcttat ccggcctaca
     9901 tgccgggaga aaagataaaa accacctcgc aattttccaa gaatttcgcg ttgcaggcag
     9961 gcggcaagtt atgaaatccc cggaagctta cataagtaag tgaccggggt tgaataacgt
    10021 agccaacgca cctgcagcgc gaaaggcgcc aggaaaatta cttagcgtct gtcgccgtac
    10081 cattcgcatg ccagtcaaac acgccgaact caaatccttt cagatcgcct ttctcatccc
    10141 acgacagcgg tcccattacg gtgtcgaccg tggtgccttt caggtatttg gcaatttccg
    10201 ccggatcgtc agactggttc agacccgcct gcaacgattg cagcgcggcg taggtggtcc
    10261 acacgaatgc gccgctagga tcttgtttct tggctttgat ggcatccaca atcggtttgt
    10321 tcgccgggac ctgatcgtag ttcttcggtt tggtgaccag taagccttcc gccgactctc
    10381 cggcgatgtt agacagcgag acgttcgcca ccccttccgg ccccataaac tgggttttca
    10441 gccctgcggc gcgggactgg cgcaaaatct gccccatttc cgggtgataa ccgccgtagt
    10501 agacaaagtc gatattctct tttttcagac gcgctaccag agtggagaaa tctttttcgc
    10561 cggcggtaat gccgtcaaag aatacgacgt taacgccgcc tttcttcaga ccgtcctgca
    10621 ccgcgcgcgc cagcccttcg ccgtactgct gcttatcgtg gataatcgcg atgcgctgcg
    10681 gttttacctt ctccagaata tactttgccg ccgttggtcc ctagtcagag tccaggccgg
    10741 tcgtgcgcaa aatcaggtta tagccgcgcg cggtcagctc cggtgcggtc gccgccgggg
    10801 ttatcatcag gatgccttcg tcttcgtaga tatcagacgc tggctgtgtg gaagaggagc
    10861 ataagtgacc gataacatac ttgatgccgt cgttcaccac tttgttagcg accgctaccg
    10921 cctgttttgg atcacaggcg tcgtcatatt tcaccgcgac gagcttatcg cctttaatac
    10981 cgcctttcgc attgatatcg gcaattgcct gctccgcacc ggtaaattcc tggtcgccat
    11041 actgcgccac cggaccggac atcgcgccga caaccgcgac tttaatgtcc tctgcgaatg
    11101 ccatatggct taatgacagg gcgatacatc ctgccaataa cgttttaccc ttcatattca
    11161 tcctgataat ccccattatt ctggttgtta cgtgtgttgt ggtgttattg ttcagcactt
    11221 tatttcgatt attggctagc tacccgtgct ttagcagcat actctgctaa aacatacccg
    11281 atttttatta ttttggaata gctaaattta catccagata acagatttgt gtcggtgggg
    11341 gagaggaagg gcccgtaggc cagataagcg aagcgacatc gggcaaacgt gttgccggat
    11401 agcagcgtaa acgccttatc cggcctacaa aaaacaaaac ccccgaattc acattcgagg
    11461 gttcattggc aattcgcgaa gattacgctt cgatcgcagc gcgaagcttt ttcatggcgt
    11521 tcttttcaag ctggcgcaca cgctcagcgg agacgccgta acgatcggcc agctcctgca
    11581 acgtagactt attgtcttcg tccagccagc gagcgcggat aatatcctgg ctacgctcgt
    11641 cgagcccctg catcgcatcg gtcagtcggt tagcggcctg ctcttcccag ttatcgtctt
    11701 caatgccgtc ggcaaagtta gacgatttat cctgcagata cagcaccggc gccattggct
    11761 ggctgtcgga ctcatcgtcc gaagacatgt caaacgtcat gtcctgcgcc gccatacgcg
    11821 actccatctc acgcacgtct ttactggaaa cacccagttc gcgcgccacc atttcaacct
    11881 catcctgatt aaaccagccc agacgctgct tggttttacg cagattaaag aacagcttac
    11941 gctgcgcttt cgtggttgcg actttaacga tacgccagtt acgcagcacg tattcgtgaa
    12001 tttctgcttt aatccagtgt acggcgaagg agaccaggcg cacgcctact tccgggttga
    12061 aacgacgtac ggctttcatc aggccgatgt tgccttcctg gatcaaatcc gcctgcggca
    12121 gaccatagcc cgcatagtta cgagcaatat gaacaacaaa gcgcaggtga gacaggatca
    12181 gcgttttagc tgcttccaga tcgccctggt aatgcagcct ttcagccaat gcccgctcct
    12241 cgtcagccga taacatcggc cacgcgttcg ccgcccggat ataagattcc aggttgccaa
    12301 caggggctaa agctaaattt tgcatttctt tggtcattca aatcctctca atcagtattg
    12361 cctggcaccg tcagcgagca acaaccgtgc caaagccgat gagcaacgag aatatcatcc
    12421 actcttttat cagacagtga ttttatccac aagttcaatg taacactgtg cataatttac
    12481 acacataatg tgacatgaag atgaaacgcg gggaagagac aacagggact ctttccctgc
    12541 gaacggaagc ccattgcagg gaaagattat accacgattt tatcaatcgg gagtaaagta
    12601 acgtaaatgt tgcaccgtag ccagccaagc ggcgatccag ccgatcatgg aacagaccag
    12661 cagcagcaac aggcactcat cgaacgataa accattgaga tcaaacttcg tgccgaagac
    12721 ctgcgccact tcagtcaccg ccgatgataa acgcatcacc aaaatttcag acaatatcag
    12781 tgaaagaaac gcgccggaaa aaccgagcaa tgcgccgccg tagaggaacg gacgcaggat
    12841 aaagccatcg gtcgcgccaa tcagcttttg cacgttaatg gtgtcgcgac gggcaaaaat
    12901 gctcaggcgc acgctgttgc cgataacgag gaagaccgcc gcgaccatca gcacgccaat
    12961 catcgccgac acgcggccca ccagcccggt gagcgccgcc agacgcgcaa accagctatc
    13021 atccatgcgg acttcgtcaa tgccgttaat ctgcgagata cggtcgcgca gcgtattaag
    13081 cgaggcggta ctttgaaagt ccagctt
//
LOCUS       DAGWFR010000113        12871 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.115, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000113 DAGWFR010000000
VERSION     DAGWFR010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 12871)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12871)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12871
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.115"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..215
                     /locus_tag="MOX77_003187"
     CDS             <1..215
                     /locus_tag="MOX77_003187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HCA3358641.1"
                     /translation="VKKEMRVFQSLVGPDLDADGLLEPARQLATKRVVVKRPDYAPPL
                     ADVATPNAIVTKEHRFDIYAGTPLTE"
     gene            complement(307..1776)
                     /gene="dtpB"
                     /locus_tag="MOX77_003188"
     CDS             complement(307..1776)
                     /gene="dtpB"
                     /locus_tag="MOX77_003188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide/tripeptide permease DtpB"
                     /protein_id="HCA3358642.1"
                     /translation="MNTTAPTGLLQQPRPFFMIFFVELWERFSYYGVQGILAVFFVKQ
                     LGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTLVLGAIVLAIGYFMTGMSL
                     LNPDLIFIALGTIAVGNGLFKANPASLLSKCYQPKDPRLDGAFTLFYMSINIGSLLSL
                     SLAPVIADKFGYAVTYNLCGAGLIVALLVYFACRGMVKNIGSEPDHKPLRFRNLLLVL
                     LGTVVMIFLCAWLMHNVKIANLVLIVLSIVVTIFFFREAFRLDKTGRNKMFVAFILMI
                     EAVLFYILYAQMPTSLNFFAINNVHHEILGFAINPVSFQALNPFWVVVASPVLAAIYT
                     RLGSKGKDLTMPMKFTLGMFLCALGFLTAAAGMWFADAQGLTSPWFIVLVYLFQSLGE
                     LLISALGLAMVAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPENITDPLQTL
                     PIYTGVFSKIGLVTLAVTVVMAIMVPWLNRMINTQGTEQ"
     gene            complement(2101..2535)
                     /gene="uspA"
                     /locus_tag="MOX77_003189"
     CDS             complement(2101..2535)
                     /gene="uspA"
                     /locus_tag="MOX77_003189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspA"
                     /protein_id="HCA3358643.1"
                     /translation="MAYKHILIAVDLSPESKVLVEKAVSMARPYNAKISLIHVDVNYS
                     DLYTGLIDVNLGDMQKRISKETHHALTELSTNAGYPITETLSGSGDLGQVLVDAIKKY
                     DMDLVVCGHHQDFWSKLMSSARQLINTVHVDMLIVPLRDEEE"
     gene            2923..3258
                     /gene="uspB"
                     /locus_tag="MOX77_003190"
     CDS             2923..3258
                     /gene="uspB"
                     /locus_tag="MOX77_003190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspB"
                     /protein_id="HCA3358644.1"
                     /translation="MISTVSLFWALCVVCIVNMARYFSSLRALLVVLRGCDPLLYQYV
                     DGGGFFTTHGQPNKQVRLVWYIYAQRYRDHHDEEFIRRCERVRRQFLLTSALCGLVVV
                     SLIALMIWH"
     gene            complement(3398..4894)
                     /gene="pitA"
                     /locus_tag="MOX77_003191"
     CDS             complement(3398..4894)
                     /gene="pitA"
                     /locus_tag="MOX77_003191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter PitA"
                     /protein_id="HCA3358645.1"
                     /translation="MLHLFAGLDLHTGLLLLLALAFVLFYEAINGFHDTANAVATVIY
                     TRAMRSQLAVVMAAVFNFFGVLLGGLSVAYAIVHMLPTDLLLNMGSAHGLAMVFSMLL
                     AAIIWNLGTWYFGLPASSSHTLIGAIIGIGLTNAMMTGTSVVDALNIPKVINIFGSLI
                     ISPIVGLVFAGGLIFLLRRYWSGTKKRARIHLTPAEREKKDGKKKPPFWTRIALILSA
                     IGVAFSHGANDGQKGIGLVMLVLIGVAPAGFVVNMNASSYEITRTRDAINNVETYFEQ
                     RPDLLKAVTGVDQLIPSPEPGATEPTEFHCHPANTINALNRAKGMLANVESYDKLSVE
                     QRSQLRRIMLCISDTTDKVVKLPGVSSDDQRLLKKLKTDMLSTIEYAPVWIIMAVALA
                     LGIGTMIGWRRVATTIGEKIGKKGMTYAQGMSAQMTAAVSIGLASYTGMPVSTTHVLS
                     SSVAGTMVVDGGGLQRKTVTSILMAWVFTLPAAIILSGVLYWLSLKII"
     gene            5125..6327
                     /locus_tag="MOX77_003192"
     CDS             5125..6327
                     /locus_tag="MOX77_003192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000439232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HCA3358646.1"
                     /translation="MERFDAVIIGAGAAGMFCAAQAGQAGSRVLLIDNGKKPGRKILM
                     SGGGRCNFTNLYVEPAAYLSQNPHFCKSALARYTQWDFIDLVGRYGIAWHEKTLGQLF
                     CDDSAQRIVDMLVAECDKGGVTMRLRSEVLSVERDESGFVLALNGETVTTQKLVIASG
                     GLSMPGLGASPFGYKIAEQFGLKVLPTRAGLVPFTLHKPLLEQLQTLSGVSVPCVITA
                     RNGTVFRENLLFTHRGLSGPAVLQISSYWQPGELVSINLLPDLSLEDVLNEQRNAHPN
                     QSLKNTLAMHLPKRLVECLQQLGLIPDVSLRQLNVRDQQTLVDTLTAWQVQPNGTEGY
                     RTAEVTLGGVDTNELSSRTMEARRVPGLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQ
                     DLIALKIN"
     gene            complement(6829..7980)
                     /locus_tag="MOX77_003193"
     CDS             complement(6829..7980)
                     /locus_tag="MOX77_003193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001685958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3358647.1"
                     /translation="MYLREVFYYPWNEYFSLTNTQSGMLMSWLGFVGIISGAVSGIIV
                     DRFKNPKSILTIAYLTMAALAIWQSFRPSYQAMFIIVGFMSLVGNGLFLVSMTKIARL
                     LASDNEQGRYFGFLESGRGIAGTVLTLCAVAIVGLHGSSAVSIGFILRFDAAIYIILG
                     FTSYYLFPKGVSAIENAAPKKMSDLISLLKSVKLWLAAFIISCVIFVYQGGAYLVPYL
                     SDAYGMTPDQTAVIGMIRAYFLAFIISPFAGLLADKIGSSLKVMASFFILGALITASF
                     IFIPHDSRFLILLITLVLLLGALTFGMRGIMYAQVNEIRIPKVFTGTAMGILICIGFS
                     PEAYVHLIFGYLLDTYKEFAYTLMFATIAVVLFAGALCSGLLYRINKKV"
     gene            complement(8124..8771)
                     /locus_tag="MOX77_003194"
     CDS             complement(8124..8771)
                     /locus_tag="MOX77_003194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000798751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HCA3358648.1"
                     /translation="MKNTCLEPYEFLIDFLADYFGENTEVVLHNLSDLESSIHKIRNG
                     HISGRSVGDPITDLVVRAMKNNDSEVHYQCNYLSKTRDGRRLKCATFFIRNKQGEIVG
                     ALCLNTVVEDLIALNDKLSHFLSIFVGQTDNNNGTQLDEHIGLTIPEMVDLKINNVIN
                     IENINPESLNAENKSHIISLLNDEGVFLLKGAVTKVAKKLNISEPTVYKYIQKLK"
     gene            complement(8810..9190)
                     /locus_tag="MOX77_003195"
     CDS             complement(8810..9190)
                     /locus_tag="MOX77_003195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000658719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HCA3358649.1"
                     /translation="MKEIIFTETAPAAIGSYSQGNAMGNLIFTSGQLPINADSGKIET
                     DDIQEQTRQSLLNLLAVVKMAGGDTDTVLKTTCFLSDMADFAAFNDVYASFFKINPPA
                     RSCFAVKTLPMGARVEIEAVAFRQ"
     gene            complement(9200..10366)
                     /locus_tag="MOX77_003196"
     CDS             complement(9200..10366)
                     /locus_tag="MOX77_003196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000872633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HCA3358650.1"
                     /translation="MKYDFNEIYQRIASEKWEYDSVINGFPVIPMSVADTDLVSPVEV
                     RQALIEVCNRREFGYPAYHDDFKDVLASWYDRYYDWRPDTADIIETPPLLMTMGAFIR
                     GMTQCNESVVVMTPVYHSFARTIRENHRAVTECDLLRDENNHYTIDFEKLEDTCSRPE
                     NKILIFCNPHNPVGRCWTEEEVRKVAAIAQKTGTILISDEIHADFVYDEKCYTPVMKA
                     AENLNGIIVFLSGGKLFNIGGIFSSYVFTADPVFKKQMAVVLKELHFQPTAFAHEAAY
                     AGYKYYHDYREEVVNHIRKMQIKLVNGLNNMPYPVKANLPEATYLVWADFNDTGWSGD
                     RIQEFLVQDAGLGFNRGDQFGVAGTGFARINCGVPESRIDEALSRLEKAFSKYF"
     gene            complement(10382..11674)
                     /locus_tag="MOX77_003197"
     CDS             complement(10382..11674)
                     /locus_tag="MOX77_003197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000858309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3358651.1"
                     /translation="MKTSNFQKWLMVILLAIGGGTIFKSMYLREVFYYPWNEFMGVNN
                     TDSGLLMSWLGFVGIVSSSIAGVIIDKVNNTRLIISFTFLAVGVTTLWQSTAPGLATQ
                     YVIIGILSFLANGLFLVSMVRATRLIGNASDQGKLFGFLESGRGIAGSAISAVAVAWF
                     AMSATEVEGIGSVLHAYGFLYLALGVLMWFAMPRDNHNSASGEEKAKEKISVHDILAV
                     MKVKEVWFAAFSIFATISFYQGSSYLVPYLSDVYGMTAEHAGIIGMIRAYVLAILIAP
                     VVGLLADKVGSAIKVMNWLFIAGVIGVAMFLVIPQDPAMVWVLIGTLMIVGSINFALR
                     GIMYAQIEEMKVPVRLTGTVMGIMATVGFSPEMFIHALFGYWLDAYKVQGYTYMFIFM
                     GAMFALAVFTSLLLLRNAKTAFKKMDGKPADTFRTAAE"
     gene            12452..>12871
                     /locus_tag="MOX77_003198"
     CDS             12452..>12871
                     /locus_tag="MOX77_003198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-binding protein"
                     /protein_id="HCA3358652.1"
                     /translation="MDKMKRHLVWWGAGILVAVAAIAWWMLRPAGIPEGFAASNGRIE
                     ATEVDIATKIAGRIDTILVSEGQFVRQGEVLAKMDTRVLQEQRLEAIAQIKEAESAVA
                     AARALLEQRQSEMRAAQSVVKQREAELDSVSKRHVRSR"
BASE COUNT         3495 a         3084 c         3106 g         3186 t
ORIGIN      
        1 tggtgaagaa agagatgcgg gtgtttcagt cgctggtggg gccggatctc gacgccgacg
       61 gactgctgga accggcgcgt cagttggcga ccaaacgcgt ggtggtcaaa cgtcccgatt
      121 atgcgccgcc gctggcggat gtcgcgacgc ccaacgccat cgtcaccaaa gagcatcggt
      181 ttgatattta tgccggaacc cctctgacgg agtaacggat tgcccgatgg cgctacgctt
      241 atcgggccta cgattctcaa ttatttgtag gccggataag gcgtaagccg catccggcac
      301 tgagtattac tgttcggtac cttgcgtatt aatcattcgg tttaaccacg gcaccataat
      361 ggccatcacc acggtgaccg ccagcgttac cagaccaatt ttgctaaaga cgccggtata
      421 aatgggcagc gtctgtaacg gatcggtgat gttttccggt acggcagtga aggtcgccac
      481 ataaccgccg agcaggaagg cggcggcctg ggtcaggaac cacattccca gaataaagcc
      541 catcagatgc tgcggcacca gagcggcgac cattgccagc cccagcgcgc taatcagcaa
      601 ctcgcccaga ctctggaaca gatacactag cacgataaac cacggcgacg tcaatccttg
      661 cgcatcggca aaccacatcc cggcggcggc ggtcagaaaa cccagcgcgc agaggaacat
      721 gccgagcgta aacttcatcg gcatagtcag atctttgcct ttgctaccca gtcgggtgta
      781 aatcgctgcc agtaccggac tggcgacgac cacccagaat gggttcagcg cctgaaaact
      841 caccgggtta atggcgaatc caagaatttc atgatgcacg ttattaatcg caaagaagtt
      901 cagtgaggta ggcatctgcg catacagaat gtaaaacagc acggcttcaa tcatcagaat
      961 aaacgccacg aacattttat tgcggccggt tttatccaga cgaaacgctt cgcgaaagaa
     1021 gaaaatagtg acgacgatag aaaggacgat gagcaccaga ttggcaatct taacgttgtg
     1081 catcagccag gcgcagagga aaatcatgac gacggtgccg agtagtacca gcagcaaatt
     1141 gcgaaaacgt agcggtttat gatccggttc agaaccgata tttttcacca tgccacggca
     1201 ggcgaagtac accagaagcg caacaattaa accagcgccg cacagattat aggtcaccgc
     1261 atagccaaat ttatcggcaa tcaccggcgc cagcgatagc gataacaaag aaccgatgtt
     1321 aatcgacata taaaacaggg tgaaagcgcc atccagccgg ggatctttag gctgatagca
     1381 tttagagagc aggctggcgg gattggcttt aaataacccg ttgcccacgg caatcgtacc
     1441 cagtgcgata aaaatcagat cgggatttaa tagcgacata ccagtcataa aatagccaat
     1501 cgccagcaca atcgcgccca ggaccagggt gcgtttagtc cctaacagat ggtcgccaac
     1561 atagccgccg atggagatca ggccataaac cagcgccgca aaagcgccaa aagtaataaa
     1621 ggcctgttcc tgagaaaaac ccaattgttt aacgaaaaag accgccagga tgccctggac
     1681 gccgtaatag ctaaatcgtt cccataattc tacaaaaaag atcatgaaga atggacgagg
     1741 ttgctgcagc aagcccgtag gtgcagttgt attcatattc cttcgccttt taatgccatc
     1801 ccgaaacgta tgaacgcgta tatcaaaacg cgccgaaaag tcttaccctg atatagactg
     1861 cggttattag cctgatcaat aggttattat acaaatgata cgcaaactaa ttagtggatc
     1921 acactaatta tgtttggtgt gatggaatga tgtactgagt actgcgaaga aggggggata
     1981 aacaaaacgc ccacataagc gggcgttgtt gttgatagcc ggagtttgcc tgatggttca
     2041 ggccaacctg attgactata gaccagatgc ggtcttagcc gccagccggc acggtaagta
     2101 ttactcttct tcgtcgcgca gcggaacaat cagcatgtca acgtgaacgg tgttgatcag
     2161 ctggcgcgca gaagacatca gtttgctcca gaagtcctgg tgatgaccgc aaacgaccag
     2221 atccatatcg tatttcttga tggcgtcaac cagcacctgg cccaaatcgc cgctaccgct
     2281 cagggtttca gtgatagggt agccagcgtt ggtagacagc tcggtcagcg cgtggtgggt
     2341 ttctttggag atacgtttct gcatatcgcc cagattgacg tcaatcagac cggtgtacag
     2401 gtctgaatag ttcacatcaa cgtggatgag ggagattttc gcgttgtagg ggcgcgccat
     2461 agagaccgct ttttcaacca gaactttact ttccggggag agatcaactg cgataagaat
     2521 gtgtttataa gccatagtgt tactccttcc ataagttgtc gatgaccatt gagctactgg
     2581 cgtttcttat gccgccgcgt cacccgcgtc ctgcgaactc tatgcgcggg gctagctcag
     2641 ccgtttacca taactatcct tacattatag cgaccaggat aatccgtcaa tctgccttgc
     2701 ttgccagtta gttaaacaaa attttcaggg aattgcattg atagtgatta accttctggt
     2761 aaaaaaatta actgatctcc tacaatgtgt ataagagccg ttcgaatgcg gagcgctaat
     2821 atggacggct ttcgtagtac tctttcactg attgtctggc agggtatcgg ggagcggtag
     2881 tcccggagag gaactccgtg ggcgggtcgc cggggaggag atatgataag caccgtctca
     2941 ctattctggg ctttatgtgt cgtttgcatt gttaatatgg cgcgctattt ctcatcgcta
     3001 cgcgcactgt tagtggtact tcgtggttgc gatcctttgc tctatcaata tgtcgatggc
     3061 ggcggcttct ttaccacgca tggtcagccc aacaaacagg tgcgcttggt atggtatatc
     3121 tacgctcagc gctatcgcga tcatcatgat gaagaattta ttcgccgttg tgaacgcgtg
     3181 cgccgccagt ttctgctgac cagcgcgtta tgcggtttgg tggtggtgag cttgattgcg
     3241 ctcatgattt ggcactgaat aaaaaaagcg ggccagtttc ctgacccgct cgtattagat
     3301 aagcctccgg atgacgccgc ttgtagcggc ctgtcaggcc tgtgtcgttt catcctgaca
     3361 ggccggatta gcgacagcgc tatccggccc atttggctta aataatcttc agggaaagcc
     3421 agtacagcac gccggaaaga ataatcgccg ccggtaacgt aaatacccag gccatcagaa
     3481 tgctggtcac ggttttacgc tgtaacccgc cgccatcaac gaccatggtt cccgccactg
     3541 aagaggagag tacgtgagtg gtagaaactg gcataccggt gtagctggca agaccgatag
     3601 agactgccgc cgtcatctgc gccgacattc cctgcgcata cgtcatgcct tttttaccaa
     3661 ttttctcgcc gatagtggtc gccacgcgac gccagccgat catcgtacca atacccagcg
     3721 ccaacgccac tgccataatg atccacaccg gcgcatactc aatggtgctt aacatatcgg
     3781 tcttcagctt tttcagcagg cgctggtcat cgctgcttac gccaggcaat ttcacgactt
     3841 tgtcggtcgt gtcggaaatg cacagcataa tgcgacgcaa ctgactacgc tgttcaacgc
     3901 ttaacttgtc gtagctttcc acgtttgcca gcatcccttt cgcacggtta agcgcgttaa
     3961 tggtgttagc cggatggcag tggaattcag tcggttcagt cgcgcccggt tccggagagg
     4021 gaatcagttg gtcaacgccg gtgacggctt tcagcaggtc aggacgctgc tcaaagtacg
     4081 tttcgacatt gttgatagca tcgcgcgtac gggtgatttc gtagctggag gcattcatat
     4141 tgaccacgaa acccgcaggc gcgacgccaa tcagcaccag catgaccagg ccaatgcctt
     4201 tctgaccatc gttcgcgcca tgcgaaaacg ccacgccgat agctgagagg atcagcgcga
     4261 tacgcgtcca gaatggcggc tttttcttgc cgtctttctt ttcacgttcg gctggcgtca
     4321 ggtggatacg ggcgcgtttc ttagtaccgc tccagtagcg gcgcagcaag aaaatcagac
     4381 cgccggcgaa taccagaccg acaatagggg agataatgag tgaaccgaaa atattgataa
     4441 ctttcgggat gttaagcgca tccaccactg acgtgccggt catcatcgca ttggttaaac
     4501 cgatgccgat aatggcgcca atcagcgtgt gggaactgga cgccggcaac ccgaaatacc
     4561 aggtaccgag gttccagata atcgccgcca gcaacatgga aaagaccata gcgaggccgt
     4621 gcgcggaacc catgttgagc aggagatccg tcggtagcat atgcacaatg gcatacgcca
     4681 cgctgagacc ccccagcaaa acgccaaaaa agttaaacac tgccgccatg acaaccgcca
     4741 gctgcgaacg catcgcacgg gtgtaaatca cggttgcgac tgcattggct gtatcatgga
     4801 aaccgttaat cgcttcgtag aacagcacaa aagccagagc aagcaataat aaaagcccgg
     4861 tatgtaaatc caggccagca aacaaatgta gcataggacg ttacgccatt ttgaggacat
     4921 gaacgcggcg cattatcagt gactttggcg gcgcgggcaa agtgaaatat agactttttt
     4981 tgatgtactt cgtgctttgt ttgatatcac taaagaatta tcttatatat ttcagataaa
     5041 taccattttc aggcgctttt cgcgctggtg cgaccactga ggaaacttta caattctcgc
     5101 ccgaatttga gagaggaagg cgacgtggaa aggtttgatg ctgttattat aggcgctggc
     5161 gcagcgggca tgttttgcgc cgcacaggca ggacaagcgg gtagccgcgt gctgctcatc
     5221 gataatggca agaagccagg acgtaaaatc ctcatgtccg gcggtgggcg ctgcaacttt
     5281 actaatcttt atgttgagcc tgctgcgtat ttgagccaga acccccattt ttgcaaatca
     5341 gcattagccc gctataccca gtgggacttt atcgatctgg tcggcaggta tgggatagcc
     5401 tggcatgaga aaacgctggg acagcttttt tgcgatgatt ccgcccaacg cattgtcgat
     5461 atgctggttg ccgagtgcga caaaggtggc gtaacgatgc gcctgcgtag cgaggtattg
     5521 agcgtcgagc gtgatgagtc gggtttcgta ctggcgttga acggcgagac ggtgactacg
     5581 caaaagctgg tgattgccag cggcggcctg tcgatgccgg ggcttggcgc atcgccgttt
     5641 ggctataaaa tcgccgaaca gtttggtctc aaggtgttgc cgacgcgcgc cgggctggtg
     5701 ccctttacgc tacataagcc gctgttagaa cagctccaga cgctgtctgg cgtctctgtg
     5761 ccctgcgtga ttaccgcccg caatggcacg gtatttcggg aaaacctact ttttacccat
     5821 cgtgggctgt ccggccccgc cgttttacag atttccagct actggcaacc gggcgagtta
     5881 gtgagcatta acttattgcc ggatctctcg ctggaagacg ttctcaatga acagcgtaac
     5941 gcgcacccga accagagtct gaagaacacg ctggcgatgc atctgccgaa acggctggtg
     6001 gagtgtttac aacagttggg gctcatcccg gatgtatcgc tcaggcagtt gaacgttcgt
     6061 gaccagcaga cgttggttga cacgctgacg gcctggcaag tacagcctaa cggtaccgaa
     6121 ggctatcgga cagcggaagt gacgctgggc ggcgtggata caaacgaact atcatcgcgg
     6181 actatggagg cgcgccgcgt gccgggtctc tattttatcg gcgaagtgat ggacgtcacc
     6241 ggctggttgg gcggctataa cttccagtgg gcctggtcga gcgcctgggc ctgcgcgcag
     6301 gatttgattg cgttaaaaat taactaattg atattatgtg tttttcggtc tcatttgact
     6361 gatcgccgta tatcttggcc tatagcatct tttagtcaga agtattctgg ataaggggca
     6421 ctcattttgc atggcatgac caccgatttc gttttaacaa tggggaatgc ggacggtagt
     6481 tttcgctata aggtcgtggc agtaaaacca gataaattgg tttcagctcg ggagcctgaa
     6541 taactttaga ttgaacatct gttctggatg ttactttggg ttgatttccc gatttgcgtt
     6601 gactcaaaac agaatcaagt ttagagataa aaatgtgtta gacgatatct ataatcagaa
     6661 tgaaacatgt ttaaccattt tcattatgaa tgcattaatc tcagctgggt tttgaagcag
     6721 accgcattca ggtcggatac tggccaacaa caccagatac agaataaggc ccctgacagg
     6781 gccttctggt agtatgtagt cgatatttac actgtttaca acggggagtc atactttctt
     6841 attaatcctg taaagcaaac cactgcacag tgcgccagca aaaagaacaa ctgcaatagt
     6901 ggcaaacatc agcgtatatg caaattcttt atacgtatca agaaggtatc cgaagataag
     6961 atggacataa gcttccgggc tgaatccgat gcagattaat atccccattg cggtcccggt
     7021 aaacactttc ggtatgcgaa tttcatttac ctgcgcatac attataccgc gcatgccaaa
     7081 cgtaagcgct cccagtaata aaaccagagt aataagcagg atcagaaatc gtgagtcatg
     7141 aggaataaat ataaaagatg cagttatcaa tgcaccgaga ataaagaagc tggccataac
     7201 tttcagggaa gaaccaatct tatctgcaag taggccagca aaaggcgaaa taataaaagc
     7261 gagaaaatat gccctaatca tcccgataac ggcagtttgg tcgggagtca ttccataggc
     7321 atcggagagg tatggtacca gataagctcc gccctggtaa acaaaaataa cacagctgat
     7381 aatgaatgct gccagccaaa gttttacact tttgagtagt gaaataagat ccgacatttt
     7441 tttaggtgcc gcattttcaa tagcactaac acctttcgga aataaataat aagaggtgaa
     7501 tcccagaata atataaatgg ctgcgtcaaa tcgtaaaata aaaccaatgc tgacagcact
     7561 ggagccatgc agaccaacaa tagccacggc acataacgtc agaacagtgc cggcaattcc
     7621 acgaccggac tccagaaatc caaaataccg cccctgctca ttgtctgatg caaggagtct
     7681 ggcaattttt gtcatggaaa ccaggaacag tccattaccg actaaggaca taaatccgac
     7741 gataataaac atggcctgat aggaaggccg gaaggactgc cagatggcaa gggccgccat
     7801 tgtgagatag gcaatggtaa gaatgctttt aggatttttg aaacggtcaa cgatgatgcc
     7861 tgaaacagca cctgatataa tgcctacaaa cccgagccag ctcattaaca tgcccgattg
     7921 tgtatttgtc agtgaaaagt attcattcca cggatagtag aatacttcac gcaaatacat
     7981 agccttgaat attgttcccc caccgactgc cagaagaata aaaaaatcag gttatgcctt
     8041 ttaatcgatt tgtcttctgc atgttccata tgtccgcctg tataactaga cgttattgta
     8101 gattgatccg ttagtgtctt gtgttatttt aatttttgta tgtatttata aacagtgggt
     8161 tcagatatgt taagtttttt ggctactttc gttactgccc ctttaagcag aaatacgcct
     8221 tcatcattta gtaatgaaat aatatggctt ttattttcag cattcagtga ctctggatta
     8281 atattttcaa tattgattac attattaatt ttgagatcaa ccatttcagg aatggtcagt
     8341 ccaatatgtt catcaagctg agtgccgtta ttattgtcag tctgcccgac aaaaatgctt
     8401 aaaaaatgac taagtttatc attcagggca attaaatctt cgacgacggt attcagacat
     8461 agtgcaccaa caatttctcc ctgcttattc cggataaaaa aagtggcaca cttaagccgt
     8521 ctgccatcgc gtgtcttgct gagataatta cactggtaat gtacctcact gtcattgttc
     8581 ttcatggcac ggactaccag atcggtgatg ggatctccga cagagcgacc gctgatatgt
     8641 ccatttctga ttttatgtat agaagactca agatcagaaa gattgtgcag aacaacttcc
     8701 gtgttttcgc caaaataatc ggccaggaaa tcgatcaaaa attcataggg ttcaagacaa
     8761 gtgtttttca tggttaatct ggttgccacc tcagtggcaa ccacctttgt tattgacgaa
     8821 atgccacagc ttcaatctca actctggcac ccataggaag tgtttttaca gcaaaacagc
     8881 tgcgtgccgg cggatttatc ttaaaaaagc tggcatagac atcgttgaac gcagcaaaat
     8941 cagccatatc actcaagaaa caggtcgttt tcagtaccgt atcagtatca ccgcctgcca
     9001 tcttaactac agccagaaga ttaagcagtg actgacgggt ctgttcctga atatcatcag
     9061 tttcaatttt gccactgtca gcgttaatgg gcaattgtcc ggaggtaaaa attaaattac
     9121 ccatcgcatt gccctgactg tatgagccaa ttgctgccgg tgctgtttct gtaaaaataa
     9181 tctctttcac ttctgttcct taaaaatact tactgaatgc cttttccaga cgactcagtg
     9241 cttcatcaat acgtgactcc ggaacaccac agttaattcg ggcaaatccg gtaccggcaa
     9301 caccaaactg atctccccgg ttaaatccga gtcccgcatc ctgcactaaa aattcctgaa
     9361 tgcgatcacc tgaccagccc gtatcattaa agtcggccca tacaagataa gtggcttccg
     9421 gcagattggc ttttaccgga tatggcatgt tattgagccc gttaaccagt ttaatctgca
     9481 ttttacggat atgattcacc acctcttcac gatagtcatg gtaatattta tatccggcat
     9541 aggcggcttc atgcgcgaac gcagtgggct gaaaatgtaa ttctttcagg acaactgcca
     9601 tctgtttttt aaatacagga tcggccgtga agacatagga actaaaaata ccgccaatgt
     9661 taaacagctt ccctccggat aaaaaaacga taatgccatt taaattttcc gcagctttca
     9721 tgaccggcgt atagcatttt tcgtcataga caaaatctgc atgaatttcg tcagaaatca
     9781 ggattgttcc tgttttctgg gcaattgcgg cgactttcct gacttcctct tcagtccagc
     9841 aacgacctac cggattatga gggttacaga aaatcagaat cttattctcc gggcgtgaac
     9901 aggtatcttc cagcttttca aaatcaatag tgtaatgatt gttttcatca cgcagcagat
     9961 cacactcagt tacagcacgg tggttttcac ggatggttct ggcaaaagaa tgatagaccg
    10021 gtgtcataac cacaacggat tcattacact gtgtcattcc cctgataaaa gcgcccatcg
    10081 tcatcagtaa aggcggtgtt tcaataatat cagccgtatc cggccgccag tcataatatc
    10141 gatcatacca ggatgccagc acatccttaa aatcatcatg ataggccgga tatccgaatt
    10201 ctctgcggtt acagacttca atcagtgcct gacgaacctc cacgggagaa actaaatcgg
    10261 tatctgcaac agacataggt attactggaa atccattaat gacactgtca tattcccatt
    10321 tttctgatgc tattctctga tagatttcat taaaatcgta tttcatttta ttttccttaa
    10381 tttattcagc cgcagtccgg aaagtatctg ccggtttacc atccattttc ttaaatgccg
    10441 ttttggcatt gcggagaagt aaaagtgaag tgaatacagc gagagcaaac atggcaccca
    10501 tgaagataaa catgtaggtg taaccctgta ctttatatgc atcaagccag tacccgaata
    10561 acgcatggat aaacatttcc ggagagaatc ccacagtggc catgatcccc ataacggtac
    10621 cggtcagacg aacaggaacc ttcatttcct caatttgcgc atacatgatc ccgcgcagag
    10681 caaagttaat ggagcctaca atcatcaggg tgccgatcag gacccatacc atagccggat
    10741 cctgtgggat caccaggaac atggcgacac caatcacccc ggcaataaac agccaattca
    10801 tcaccttaat cgctgagccg actttgtctg cgagcagacc cacaaccggt gcaatcagga
    10861 tagcgaggac ataagcacgg atcataccga taattccggc atgttcggcg gtcattccgt
    10921 agacatcaga cagataagga accagatatg aggacccctg atagaaggag atggttgcaa
    10981 agatggagaa agctgcaaac cagacttcct taaccttcat gacagccaga atatcgtgta
    11041 cagatatttt ttccttggcc ttttcttctc cggaagcaga attatggtta tcacggggca
    11101 tggcgaacca catcagaaca cccagcgcta ggtagagaaa gccgtatgca tgtagcacac
    11161 tgccaatccc ttccacttcg gttgcagaca tggcgaacca tgctacggca acggcagaga
    11221 tggctgaccc agcgatacca cgtccggact ccaggaaacc aaacagcttc ccctggtcac
    11281 tggcattacc aatcaggcgg gttgcgcgca ccatcgatac taggaaaaga ccatttgcga
    11341 ggaaagatag tatgccgatg atgacatact gcgtagccag acccggtgct gttgactgcc
    11401 ataatgtggt tacgcccaca gccagaaagg taaaagaaat aatcagtcgg gtattgttca
    11461 ccttatcgat aatcacccca gcaattgaag atgaaacaat ccccacaaac cccagccaac
    11521 tcatcagcag gcctgaatcc gtgttattca ctcccatgaa ttcattccag gggtaataaa
    11581 atacttccct gaggtacatc gatttaaaaa tggtccctcc tccgattgcc agaagaatga
    11641 ccatcaacca tttttgaaaa ttggatgttt tcataaacct tcgcctgtcc ataaataaga
    11701 aacaagtgtt catgtgagaa tataattttt tatacacatg aatattatga agcacttcac
    11761 agagtgggca aaaaagataa aaaattatct cttctaattt aatatcatta aaatcatgta
    11821 gttatatgta taataaatta tacatatgtg tggggcatta attatttacg gttgtaattt
    11881 tataaaaatt ataaattttt atatttcagg acgtaactgt ctgacaacat atatgctgaa
    11941 tagggcggag aataggggca ggaaagtgga taaaatatta tcgtgtttta cctccggcag
    12001 gagcgtttcc ttattagaag tacgaatatt tgatgccgtg ggctgtatcc atgtttttta
    12061 gccgggcccg gcgacttgag caggggtaat cacgcatgct ttcgttacca gccccttcgg
    12121 taaatagatt gacgggcacg attttttgtc tgcaacatct gtgctacaac cgaatagaca
    12181 tattgaatcc aggtgttagt attcaataga cagcagttat gagtatgcgt gtttcatttc
    12241 cggccaggaa cgctgatgat gacaacatta ctacccggtt tcacagcatt ttcgtcattc
    12301 acttccttcg cggcgcgcgt tgccttaacg ctcgctcaat ggccattgtt tttcattcct
    12361 tcttatcccg gatggaaacc cccgctgagc gcacgcccgg cggactttgt gacacgcatg
    12421 gttaggcaac agggattacg gcgggtcgat tatggacaaa atgaagcgtc atctggtgtg
    12481 gtggggagcg gggattcttg tggcggtggc cgcgatcgcc tggtggatgc tgcgccctgc
    12541 gggaataccg gaggggtttg ccgccagcaa tggcagaatt gaagccaccg aagtggatat
    12601 tgccactaag attgccgggc gtattgatac catcctcgtt tcggaagggc agttcgttcg
    12661 tcagggcgag gtgctggcga aaatggatac ccgcgtattg caggagcagc ggctggaggc
    12721 gattgcgcag attaaagagg ccgagagcgc agttgccgcc gcccgtgcct tgctggagca
    12781 acgccagagt gaaatgcgcg ccgcgcagtc ggtcgtcaaa cagcgggaag ctgagctgga
    12841 ctccgtctct aaacgtcacg tgcgttctcg t
//
LOCUS       DAGWFR010000114        12513 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.116, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000114 DAGWFR010000000
VERSION     DAGWFR010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 12513)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12513)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12513
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.116"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..332)
                     /gene="nanK"
                     /locus_tag="MOX77_003199"
     CDS             complement(<1..332)
                     /gene="nanK"
                     /locus_tag="MOX77_003199"
                     /EC_number="2.7.1.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmannosamine kinase"
                     /protein_id="HCA3358653.1"
                     /translation="MTTLAIDIGGTKLAAALIDNNLRISQRRELPTPASKTPDALREA
                     LKALVEPLRAEARQVAIASTGIIQEGMLLALNPHNLGGLLHFPLVQTLETIAGLPTLA
                     VNDAQAAA"
     gene            complement(329..1008)
                     /locus_tag="MOX77_003200"
                     /pseudo
     CDS             complement(329..1008)
                     /locus_tag="MOX77_003200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462247.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmannosamine-6-phosphate 2-epimerase"
     gene            complement(1055..2545)
                     /gene="nanT"
                     /locus_tag="MOX77_003201"
     CDS             complement(1055..2545)
                     /gene="nanT"
                     /locus_tag="MOX77_003201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sialic acid transporter NanT"
                     /protein_id="HCA3358654.1"
                     /translation="MSTSTQNIPWYRHLNRAQWRAFSAAWLGYLLDGFDFVLIALVLT
                     EVQSEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVSSIILFSVGTLAC
                     GFAPGYTTMFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSVGAVVA
                     AQVYSLVVPVWGWRALFFIGILPIIFALWLRKNIPEAEDWKEKHAGKAPVRTMVDILY
                     RGEHRIINILMTFAAAAALWFCFAGNLQNAAIVAGLGLLCAVIFISFMVQSSGKRWPT
                     GVMLMLVVLFAFLYSWPIQALLPTYLKTELAYDPHTVANVLFFSGFGAAVGCCVGGFL
                     GDWLGTRKAYVCSLLASQILIIPVFAIGGTNVWVLGLLLFFQQMLGQGIAGILPKLIG
                     GYFDTDQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTFVVILLI
                     GLDMPSRVQRWLRPEALRTHDAIDDKPFSGAVPLGSGKGAFVKTKS"
     gene            complement(2661..3554)
                     /gene="nanA"
                     /locus_tag="MOX77_003202"
     CDS             complement(2661..3554)
                     /gene="nanA"
                     /locus_tag="MOX77_003202"
                     /EC_number="4.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylneuraminate lyase"
                     /protein_id="HCA3358655.1"
                     /translation="MAKALQGVMAALLTPFDHQQQLDSESLRRLVRFNIGQGIDGLYV
                     GGSTGEAFVQSLAEREQVLEIVAEEAKGKITLIAHVGTVSTAESQQLASAAKRYGFDA
                     VSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVTLPG
                     VNALKQTSGDLFQMEQIRRAHPDLVLYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQ
                     GIVQALREGDVAKAQRLQTECNKVIDLLIKTGVFRGLKTVLHYMDVVSVPLCRKPFAP
                     VDEKYLPALKALAQQLMEEKA"
     gene            complement(3689..4480)
                     /gene="nanR"
                     /locus_tag="MOX77_003203"
     CDS             complement(3689..4480)
                     /gene="nanR"
                     /locus_tag="MOX77_003203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NanR"
                     /protein_id="HCA3358656.1"
                     /translation="MDVMNAFDSQAEDSPTSLGRSLRRRPLARKKLSEMVEEELEQMI
                     RRHEFGEGEQLPSERELMAFFNVGRPSVREALAALKRKGLVQINNGERARVSRPSADT
                     IISELSGMAKDFLTHPGGIAHFEQLRLFFESSLVRYAAEHATDEQIALLTKALEINSQ
                     SLDDNALFIRSDVEFHRVLAEIPGNPIFMAIHVALLDWLIAARPSVPDRELHEHNNVS
                     YQQHIVIVDAIRQRDPDKADRALQTHLNSVSATWHALGKKSQKMR"
     gene            complement(4589..5089)
                     /gene="sspB"
                     /locus_tag="MOX77_003204"
     CDS             complement(4589..5089)
                     /gene="sspB"
                     /locus_tag="MOX77_003204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ClpXP protease specificity-enhancing factor"
                     /protein_id="HCA3358657.1"
                     /translation="MDLSQLTPRRPYLLRAFYEWLLDNQLTPHLVVDVMLPGVHVPME
                     YARDGQIVLNIAPRAVGNLELSNDEVRFNARFGGVPRQVSVPLAAVLAIYARENGAGT
                     MFEPEAAYDEDVVSLNDDDNTAGAESETVMSVIDGDKPDHDDDSSPDDEPPPPRGGRP
                     ALRVVK"
     gene            complement(5095..5733)
                     /gene="sspA"
                     /locus_tag="MOX77_003205"
     CDS             complement(5095..5733)
                     /gene="sspA"
                     /locus_tag="MOX77_003205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000257299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stringent starvation protein A"
                     /protein_id="HCA3358658.1"
                     /translation="MAVAANKRSVMTLFSGPTDIYSHQVRIVLAEKGVSFEIEHVEKD
                     NPPQDLIDLNPNQSVPTLVDRELTLWESRIIMEYLDERFPHPPLMPVYPVARGESRLY
                     MHRIEKDWYTLMNVIVNGSASEVDSARKQLREELLAIAPVFGQKPYFLSDEFSLVDCY
                     LAPLLWRLPQLGIEFSGAGAKELKGYMTRVFERDSFLASLTEAEREMRLGRG"
     gene            5848..6021
                     /locus_tag="MOX77_003206"
     CDS             5848..6021
                     /locus_tag="MOX77_003206"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358659.1"
                     /translation="MNIPRYLGRKLDDSLPDFVTFVVSRFWNWGKRDNNPHFIVTDKC
                     IAHKKTRQSGFFR"
     gene            complement(6048..6440)
                     /gene="rpsI"
                     /locus_tag="MOX77_003207"
     CDS             complement(6048..6440)
                     /gene="rpsI"
                     /locus_tag="MOX77_003207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000829824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HCA3358660.1"
                     /translation="MAENQYYGTGRRKSSAARVFIKPGNGKIVINQRSLEQYFGRETA
                     RMVVRQPLELVDMVEKLDLYITVKGGGISGQAGAIRHGITRALMEYDESLRGELRKAG
                     FVTRDARQVERKKVGLRKARRRPQFSKR"
     gene            complement(6456..6884)
                     /gene="rplM"
                     /locus_tag="MOX77_003208"
     CDS             complement(6456..6884)
                     /gene="rplM"
                     /locus_tag="MOX77_003208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010847760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HCA3358661.1"
                     /translation="MKTFTAKPETVKRDWYVVDATGKTLGRLATELARRLRGKHKAEY
                     TPHVDTGDYIIVLNADKVAVTGNKRTDKVYYHHTGHIGGIKQATFEEMIARRPERVIE
                     IAVKGMLPKGPLGRAMFRKLKVYAGNEHNHAAQQPQVLDI"
     gene            complement(7185..8309)
                     /locus_tag="MOX77_003209"
     CDS             complement(7185..8309)
                     /locus_tag="MOX77_003209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AFG1 family ATPase"
                     /protein_id="HCA3358662.1"
                     /translation="MQSLSPTSRYLQALNEGTHQPDDVQKEAVDRLETLYQALTAKKS
                     SATPPGGLIARLGKLLGKNEPDAQIPVRGLYMWGGVGRGKTWLMDLFYHSLPGERKLR
                     LHFHRFMLRVHEELTALQGQIDPLDIIADRFKTETDVLCFDEFFVTDITDAMLLGGLM
                     KALFARGITLVATSNIPPEELYRNGLQRARFLPAIDAIKQHCDIMNVDAGVDYRLRTL
                     TQAHLWLTPLNDETRRQMDKLWLALAGAAREHAPTLEINHRPLSTLGVENQTLAASFA
                     TLCVEARSQHDYIALSRLFHTVLLFDVPVMTPLMENEARRFIALVDEFYERHVKLVVS
                     AAAPLYEIYQGERLKFEFQRCLSRLQEMQSAEYLKREHMP"
     gene            8502..8900
                     /locus_tag="MOX77_003210"
     CDS             8502..8900
                     /locus_tag="MOX77_003210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1043 family protein"
                     /protein_id="HCA3358663.1"
                     /translation="MTWEYALIGLVVGIIIGAVAMRFGNRKLRQQQALQYELEKNKAE
                     LEEYREELVSHFARSAELLDTMAHDYRQLYQYMAKSSSSLLPEMSAESNPFRNRLAES
                     EASNDQAPVQMPRDYSEGASGLLRSGAKRD"
     gene            9057..10424
                     /gene="degQ"
                     /locus_tag="MOX77_003211"
     CDS             9057..10424
                     /gene="degQ"
                     /locus_tag="MOX77_003211"
                     /EC_number="3.4.21.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine endoprotease DegQ"
                     /protein_id="HCA3358664.1"
                     /translation="MKKHTQLLSALALSVGLTLSAPFPALASIPGQVPGQATLPSLAP
                     MLEKVLPAVVSVKVEGTATQSQKVPEEFKKFFGEDLPDQPSQPFEGLGSGVIIDAAKG
                     YVLTNNHVINQAQKISIQLNDGREFDAKLIGGDDQSDIALLQIQNPSKLTQIAIADSD
                     KLRVGDFAVAVGNPFGLGQTATSGIISALGRSGLNLEGLENFIQTDASINRGNSGGAL
                     LNLNGELIGINTAILAPGGGSIGIGFAIPSNMAQTLAQQLIQFGEIKRGLLGIKGTEM
                     TADIAKAFKLNVQRGAFVSEVLPNSGSAKAGVKSGDVIISLNGKPLNSFAELRSRIAT
                     TEPGTKVKLGLLRDGKPLEVEVTLDSNTSSSASAEMIAPALQGATLSDGQLKDGTKGV
                     KVDSVEKSSPAAQAGLQKDDVIIGVNRDRISSIAEMRKVMAAKPSIIALQVVRGNENI
                     YLLLR"
     gene            10517..11587
                     /gene="degS"
                     /locus_tag="MOX77_003212"
     CDS             10517..11587
                     /gene="degS"
                     /locus_tag="MOX77_003212"
                     /EC_number="3.4.21.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane-stress sensor serine
                     endopeptidase DegS"
                     /protein_id="HCA3358665.1"
                     /translation="MFVKLLRSVAIGLIVGAILLAVMPSLRKINPIAVPQFDSTDETP
                     ASYNFAVRRAAPAVVNVYNRSMNSTAHNQLEIRTLGSGVIMDQRGYIITNKHVINDAD
                     QIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINTKRTPHIGDVVLAIGN
                     PYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINTL
                     SFDKSNDGETPEGLGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREIAPLHAQQGSG
                     MDPIQGIVVNEVTPNGPAALAGIQVNDLIISVNNKPAVSALETMDQVAEIRPGSVIPV
                     VVMRDDKQLTFQVTVQEYPASN"
     gene            complement(11621..12352)
                     /locus_tag="MOX77_003213"
     CDS             complement(11621..12352)
                     /locus_tag="MOX77_003213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triphosphoribosyl-dephospho-CoA synthase"
                     /protein_id="HCA3358666.1"
                     /translation="MIMLPQNEDTVMSEMVAFRQGTSMPSRETILRYVVETVNQITEL
                     EPALHLLPWSGVNSAIYEQRFAQCYDEGLCAAQTSAPNVPQGILPSTDWAQGIGLLCF
                     AAGYMSAGERPLTHNRLCDFVKQAAVGLSPIEGEAASGFSTVRSIALPVFRRLQRDGH
                     ASRVLLLQTLLHLVAWKSASQYARQQAQRLLWMGGILGEGSESGLLTLDKALREEAVG
                     EKSFPALLIFTSFLAHFPAGPVFID"
     gene            complement(12373..>12513)
                     /locus_tag="MOX77_003214"
     CDS             complement(12373..>12513)
                     /locus_tag="MOX77_003214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium ion-translocating decarboxylase subunit
                     beta"
                     /protein_id="HCA3358667.1"
                     /translation="ARVSNKVGLESNPQNFLLMHAMGPNVAGVIGSAIAAGVMLKYVL
                     AM"
BASE COUNT         3032 a         3489 c         3228 g         2764 t
ORIGIN      
        1 caggccgccg cctgcgcgtc gttcaccgcc agcgtcggca ggccagcgat cgtttccagt
       61 gtttgtacta acggaaagtg tagcaagccg cccagattat gggggtttag cgccagcagc
      121 atcccttcct gaatgatccc ggtagaagct atcgctacct gacgcgcctc tgcccgtagt
      181 ggttcaacca gcgcctttaa tgcttcacgt aacgcatccg gcgttttgct cgcgggggtc
      241 ggtagctcgc gacgctggct aatgcgcaag ttgttgtcga tgagcgcggc ggcaagttta
      301 gtaccgccaa tatcgattgc taacgtagtc atgacgccgc cttttttaat gcgtcgttat
      361 accatccaca gatacgttcc agacgggtaa tggcggaccc caccgtcacc gcccatgcgc
      421 catagcggat cgcctccgcc gccagtgctg gcgagttata gcgcccttcg gctattaccc
      481 ggcatccggc gtcatgcaac gctttgacta agggcagatc gggttcctcc ggcgtatcgg
      541 gggtggtgta gccggacatt gtcgtgccga taatgtccgc gcccaaccgt tggcaggcga
      601 gaccatcgtc cacggatgag cagtcggcca tcgccagtag atggtggtga tgaatgcgcg
      661 ccaacaacgc ctcaacggct accggccgtt gccgagcggt tccatcaacg gcgataatag
      721 ctgcgccagc gcatctacat cgtcgagaaa aggggtaatg cgcactggag agtcgtccag
      781 atcgcgtttg ataatgccga taatgggtac cgaaacgagc gaacgggcca cgcgcaggtt
      841 gtctatgcct tcaatacgca ccgcaaccgc gcccgcctgt tccgccgcca acgccattgc
      901 cgctacaatc tccggcttat ccagcggact gcccggaacg ggctggcagg agacaatcag
      961 gccgccagaa gcggcaatat ttttatccag ttgttcaagt aacgacatac tactccctta
     1021 caaatattgc ccggttgaaa accgggcaag cggattaact tttcgttttt acaaaggcac
     1081 ctttaccact gccaagcggt acggctccgc tgaacggttt gtcgtcgata gcatcatggg
     1141 tgcgtaacgc ttccggacgt agccaacgct gtacgcgaga cggcatatca agcccaataa
     1201 gcaggatcac gacaaacgtc aggctgaaag agagcgatgc cagcgcagtg cccagatcca
     1261 gacgttgagc gatcagcgct cccaggatcg gtgccagcgc gccgccgagc gcgccgacgt
     1321 tataagtaaa gcccagcccc gccgcgcgct gatcggtatc gaagtaaccg ccgatcagtt
     1381 tcggcagaat cccggcaatc ccctgcccca acatctgttg gaaaaacagt agcagaccca
     1441 gaacccagac gtttgtgccg ccaatcgcaa agaccggaat aatgaggatt tgcgaggcca
     1501 gcaggctaca gacatatgct ttacgcgttc ccagccagtc gccaagaaaa ccgcctacgc
     1561 aacaaccaac cgccgcgcca aatccgctaa agaacaggac attcgccacc gtatgcggat
     1621 cgtaggccag ctcggttttc agataagtag gtaatagcgc ctgaatcggc caagaataga
     1681 ggaaagcaaa cagtaccacc agcatcagca tgacgccagt gggccagcgt ttaccgctgc
     1741 tctgcaccat aaagctgata aagataaccg cgcacagtag tcccagcccc gccacaatcg
     1801 cagcattttg taggttaccg gcaaaacaga accacagcgc agcggcggcg gcgaaggtca
     1861 ttaaaatgtt gatgatacga tgttcgcccc gataaagaat gtcgaccatc gtgcgtaccg
     1921 gcgctttacc cgcgtgtttt tctttccagt cttccgcttc cggaatgttt ttccgcagcc
     1981 agagggcgaa gataattggc aaaatgccaa tgaaaaacag cgcgcgccag ccccagacag
     2041 gcaccaccag gctgtacacc tgcgcggcaa cgaccgcgcc gacggagaag ccggaaatca
     2101 gaaaaccact ggctttattg cgtaaatgtt ttggccagct ttcaatcaca taggtcgcgc
     2161 tggaaccata ttcgcccgcc atgcccatac caatcaccag tcgggcgatg aacatggtgg
     2221 tgtaaccggg cgcaaacccg caggccaggg ttcccaccga aaacagaatg atgctgctga
     2281 ccatcgccag acgacgccca tagcgatcgc ccatcgcgcc cagtaataac ccgccgaacc
     2341 agcgagagat aaaagccgca gaaatcaggc ttgccgcctg taccgtcgtc agcccaaatt
     2401 cgctttgtac ctcagtcagt acaagagcaa ttaacacaaa atcaaaacca tcaagcagat
     2461 atcccaacca ggcagcggaa aatgcccgcc attgcgcccg gttgagatgg cgataccacg
     2521 ggatgttctg ggtagaagta ctcattttac tctcccgacg atttttgttg tcgttatgcc
     2581 gaatggcggc tccgccttat ccggcctact gttcgcactg ttgtaggccg ggcaagcgta
     2641 gcgcccccgg cattatgctg ttacgccttt tcttccatca gttgttgagc cagcgccttg
     2701 agcgccggca gatatttttc atcaacaggc gcaaacggtt tacgacatag cggcaccgat
     2761 accacgtcca tataatgcag gaccgttttc aggccgcgga atacgccggt tttaatcagt
     2821 aaatcaataa ccttattgca ctcggtttgc agacgctgcg ctttcgccac atcgccctca
     2881 cgcaatgcct gaacaatccc ctgataacgc caacccataa tgttgtatgt gctgccgata
     2941 ccgccgtccg cgcccgccag cagaccggaa gcgaagattt cgtcataacc gttgtacagc
     3001 accagatccg gatgcgcgcg gcggatctgc tccatctgga agagatcgcc ggaggtttgc
     3061 ttcagcgcgt tcacgcccgg taatgtcacc agcgtattga tctgatcgag ggtaagtttt
     3121 acgccgctta acgccggaat gttgtatacc accatcggca atccatctgc ggaatcaatg
     3181 attgcccgat aatggtcaca gtgctcttca aaactgaaag ggtaataaaa aggcgtcacc
     3241 gcagagaccg catcaaaacc gtaacgcttt gcggcgctgg caagctgctg gctttctgcg
     3301 gtgcttactg tcccgacatg ggcgatcaac gtgatttttc ccttcgcctc ttcggcgaca
     3361 atctccagta cctgctctct ttcagcaagg ctctgtacga atgcttcccc ggtggaaccg
     3421 ccaacgtaca gcccgtcgat accctgcccg atgttaaaac gcaccagacg gcgcaggctt
     3481 tcgctatcca gttgctgctg atgatcaaat ggggtcaaca acgccgccat tacgccttgc
     3541 aatgcttttg ccatacctac ctctacggat gatgaatata ttaactacct acctttatac
     3601 ctgttatacc agatcaaata agcagcaaat aatacagaac gcttatagtg cgatctgctt
     3661 cactaaaccg ggatcggagg tgcgatcgct accgcatttt ttgacttttt ttaccgagcg
     3721 cgtgccaggt agcggaaacg ctattgaggt gggtttgcag agcgcgatcc gctttatcgg
     3781 gatctcgctg gcgaatggca tcaacaatca caatatgctg ttgataactc acgttattat
     3841 gttcatgcag ctcacgatcg ggaacgcttg ggcgagcagc gattagccag tccagcagag
     3901 caacatgaat agccataaag atcggattgc cgggaatttc agccagcacc cggtgaaact
     3961 cgacatccga acgaataaac agcgcgttgt catccagcga ctggctatta atttccagcg
     4021 ctttcgttaa caacgcgatc tgctcgtcgg tggcatgttc cgccgcatag cgtaccaggc
     4081 tggattcaaa gaaaagccgt agctgttcaa agtgagcgat gccgccagga tgagtaagaa
     4141 aatctttcgc catacccgac agttcgctga tgatggtatc agcagagggg cgcgagacgc
     4201 gggcgcgttc gccgttattg atttgcacca gacctttacg cttcagcgca gctaacgctt
     4261 cacgcacgga gggacgtccc acattgaaga aggccattaa ttcacgttca gacggtagct
     4321 gttctccctc gccaaactca tgacggcgga tcatctgctc cagctcttcc tcaaccattt
     4381 cagacagttt tttacgcgcc agcgggcggc ggcgcaaact acgcccgagg gatgtcggtg
     4441 aatcttctgc ttgcgaatca aatgcgttca taacgtccat tcatgagtgg tcggtggcaa
     4501 ataatagcaa gcttatcgta acacagcttc aaaagcaggg tgaacccgcg aggagaccaa
     4561 acaaaacagg cccttcaggg cctgttgatt attttactac gcgcagcgcc ggacgtccgc
     4621 cacgcggcgg aggcggctcg tcatcaggac tactgtcgtc atcgtggtcg ggcttatcgc
     4681 catcaatgac ggacatcacg gtctcgcttt ccgcgcctgc ggtattgtca tcatcattta
     4741 agctgacaac gtcttcatca taggcggctt caggctcaaa catggtgcct gcgccgtttt
     4801 cacgggcgta aatcgccagc accgcagcca aaggcacaga aacctgacgg ggaacgccgc
     4861 cgaagcgcgc attaaaacgc acttcatcat tagacagctc cagattacct accgcccgcg
     4921 gcgcaatatt gaggacgatt tgcccatcgc gcgcatattc catagggaca tgcacgccag
     4981 gcagcatcac atccaccacc agatgcgggg tcaactggtt atccagcaac cactcgtaga
     5041 aagcacgcaa cagataggga cgacgcggcg tcaactgtga caaatccata caggttaacc
     5101 ccgaccgagg cgcatttcac gttcagcttc ggttaaagaa gccaggaaag aatcacgttc
     5161 aaagacgcgg gtcatatagc ctttcagctc tttcgcccct gcgccgctga attcgatacc
     5221 caactgcggt aaacgccaca ggagaggcgc caggtagcaa tcaaccaggc tgaattcgtc
     5281 gctcaggaaa tacggtttct gaccaaatac cggcgcaatc gccagcagct cttcacgcag
     5341 ttgtttacgc gcagagtcga cctcggaagc agacccgttt acgatgacgt tcatcagcgt
     5401 ataccagtct ttttcaatac ggtgcatgta cagacggctt tcaccgcgcg cgaccggata
     5461 aaccggcatc agcggcggat gggggaaacg ctcatccaga tattccataa tgatgcgaga
     5521 ttcccacagg gtcagctcac gatccaccag tgtcggaacg ctttgattcg ggttgaggtc
     5581 aatcagatcc tgaggtggat tgtccttttc cacatgttcg atctcaaaac taacaccctt
     5641 ttcagccaac acaatgcgga cctgatggct atagatgtca gtaggaccag aaaacagcgt
     5701 cattaccgaa cgtttgttgg cagcgacagc catgaaaacc tccaggtata ttcagaattt
     5761 ttactgctac cagccacaat gtgaccagcc agatgttatg tcacccaggg cgaaaaaagc
     5821 catcattgct cagaaacgag acaaaaaatg aacattcccc gctatttggg cagaaaattg
     5881 gatgatagtt taccagattt tgtgaccttt gtggtgagtc gattctggaa ttggggaaaa
     5941 agagacaaca atccgcattt cattgtgaca gataaatgca ttgcccataa aaaaacccgc
     6001 caaagcgggt tttttcgcta acagttgtct gccgaagcag aaaacaatta acgtttggag
     6061 aactgcggac gacgacgtgc tttacgcagg ccgactttct tacgttcaac ctgacgagcg
     6121 tcacgagtaa cgaagccagc tttacgcagt tcgccacgca gggactcgtc gtactccatc
     6181 agagcgcggg tgataccgtg acggatcgca ccagcctgac cagagatacc accaccttta
     6241 acagtgatgt acagatccag tttctcaacc atgtcgacca gttccagcgg ctgacgaact
     6301 accatgcggg cagtttcacg accgaagtac tgttccagag aacgttggtt gataacgatt
     6361 ttaccgttgc ccggcttgat gaaaacgcga gctgcggaac ttttgcggcg accagtgccg
     6421 tagtattgat tttcagccat tgcctataat cccgattaga tgtcaagaac ttgcggttgc
     6481 tgtgccgcgt ggttgtgctc gttgcccgcg taaactttca gtttacggaa catagcacga
     6541 cccagcgggc cttttggcag catgccttta accgcgattt caatcacacg ctcaggacgg
     6601 cgggcaatca tctcttcaaa ggtcgcttgt ttgataccac cgatgtggcc ggtgtggtga
     6661 tagtacactt tgtcagtacg cttgttgccg gttacagcaa ctttgtcagc gttcagaacg
     6721 atgatgtaat caccggtatc tacgtgcgga gtgtattccg ctttgtgctt accgcgcagg
     6781 cgacgagcca gttcagtagc cagacggccc agagttttac cggtcgcgtc aacaacatac
     6841 cagtcgcgtt ttacggtttc tggtttagct gtaaaagttt tcattaaaag cttacccaaa
     6901 taaataagtt acacgttggt gaacacccaa acgtttaaat agttgaggtt cacacgacaa
     6961 agtccggtaa acctaccccc tcggatatgt ttggccggca cagagaaagt ttgggaaaaa
     7021 actctcttgt aacgtggggt cgcaggatta tagagaagtc caggtcaaag atcgacccct
     7081 ttttgcgatt tgccgcgggt tttgttcagg cctagttcac cctcggtcgg ggaggttgca
     7141 cagatataat accgcataat gccggagcgc tacgcttgtc cggcttacgg catatgctcc
     7201 cgcttgagat actccgcact ctgcatctct tgcaggcgcg acagacagcg ctgaaattca
     7261 aacttgagtc gctccccctg ataaatctca tataacggcg cggcggcgct gaccaccagc
     7321 ttaacgtggc gctcgtaaaa ctcatccacc agcgcaataa agcggcgcgc ttcgttctcc
     7381 atcagcggcg tcatgaccgg cacgtcaaac aacagaaccg tgtgaaataa ccttgagagc
     7441 gcaatgtaat catgctggct gcgagcctcg acgcacagcg tagcgaaaga ggccgctaac
     7501 gtttggtttt caacgcccag ggtggataaa gggcgatgat tgatttccag cgtcggagca
     7561 tgttctcgtg cggcccccgc taacgccagc cacagtttat ccatttgccg ccgggtttca
     7621 tcattaagcg gcgttagcca taaatgggcc tgcgtcagcg tccgcagccg gtaatcgacg
     7681 ccggcgtcca cattcataat gtcgcagtgc tgtttaatgg catcgatagc cggcaggaag
     7741 cgggcgcgtt gcaaaccgtt gcggtagagt tcctccggcg gaatattgga ggtcgcgacc
     7801 agcgtaatgc cgcgtgcaaa cagcgctttc attaaaccgc ccagcagcat ggcgtcggta
     7861 atatcggtga cgaaaaactc atcgaaacac agtacgtccg tctcggtttt aaaccgatcg
     7921 gcaataatgt ctaacggatc gatctgtccc tgtagcgcgg taagctcttc atgcacgcgc
     7981 agcataaacc gatgaaaatg caggcgcaat tttcgctcac ccggcaggct gtggtagaag
     8041 agatccatga gccaggtttt gccgcgaccc acgccccccc acatatacag cccgcgaacc
     8101 ggtatttgcg cgtccggttc gtttttgcct aataatttcc ccagtcgcgc tatcagaccg
     8161 ccgggtggcg tagccgacga ttttttcgcg gtgagcgcct gataaagggt ttccagacgg
     8221 tcgaccgcct ctttctgtac gtcgtcaggc tgatgggtgc cttcgttgag tgcctggaga
     8281 taacgcgatg taggggaaag actttgcata atgttattgt tattccttga aaatcgatgt
     8341 gccgtcgttc acggctgacg aaaaaaaggc cgttctacac tacgcgatat gctgtcggga
     8401 ttccacttct acgaaattag cggttatagt ggcataatca ggcgcgggca tggagcctgg
     8461 agccaacacc ctacggaaac ataagacaac gggagatgtt catgacctgg gaatatgcgc
     8521 taattggatt agtcgtcggt atcatcattg gtgccgtggc catgcgtttt ggtaatcgta
     8581 agttacgtca acagcaggca ttgcagtacg aactggaaaa aaacaaagct gagctggaag
     8641 agtaccgtga agagctggtt agccactttg cccgcagcgc ggaactgctg gataccatgg
     8701 cgcatgatta ccgccagctg tatcagtata tggcgaaaag ctccagcagc ctgctgccgg
     8761 aaatgtctgc ggagtcgaat ccgttccgta accgtctggc ggagtctgag gcgagcaacg
     8821 atcaggcgcc agtacaaatg ccacgtgatt attctgaagg cgcgtctggc ctgttacgta
     8881 gcggcgcaaa gcgcgattaa tcgcacgccg ttaagaaatt tatcgggcgc atcgcttgcg
     8941 ccctctctct atctttcctg tcccagctat tatcattgtt accaggctga aaattcaata
     9001 acatcaatct gttttgaatt gtctatccgt tcattcaagg tacgagagca gcatccatga
     9061 aaaaacacac ccagctgtta agtgcattag cgttaagtgt cggattaact ctttcggcac
     9121 cgtttccagc ccttgcatcg ataccaggcc aggtgccagg ccaggcgacg ctgccaagcc
     9181 ttgcccctat gctggagaaa gtgctgcctg ctgtcgtcag cgtaaaagtc gagggaaccg
     9241 ccacccagag ccaaaaagtg ccggaggagt ttaaaaaatt ctttggcgag gatctgccag
     9301 accagccgtc ccagccgttt gaaggactcg gttcgggggt gattatcgat gccgcgaaag
     9361 gctatgtatt aaccaataat catgtgatta atcaggcaca gaagatcagc attcaactga
     9421 atgacggacg cgaattcgac gcgaagctga tcggcggcga cgaccagagc gatatcgctc
     9481 tgttacaaat tcagaatccc agcaagttaa cgcaaattgc catcgccgat tccgacaaac
     9541 tccgcgtcgg cgatttcgcc gtggcggttg gtaatccgtt tggccttgga caaaccgcca
     9601 cctccgggat tatttcagcg ctgggacgca gcgggcttaa tctggaaggg cttgagaact
     9661 ttattcaaac cgatgcctct attaaccgcg gcaactccgg cggcgcgctg cttaacctga
     9721 acggcgagct gatcgggatt aataccgcaa tcctcgcgcc agggggcggg agcatcggca
     9781 ttggctttgc tattccttcc aatatggcgc agacgctggc gcagcagttg attcagttcg
     9841 gcgaaatcaa acgcggattg ctgggaatta aaggcactga aatgaccgct gatatcgcta
     9901 aggcattcaa actgaacgtt cagcgtggcg cttttgtcag cgaggtttta cccaattcag
     9961 gttcggcgaa ggccggggtg aaatccggag acgtgattat cagtcttaac ggtaagccgc
    10021 tgaatagctt tgccgaactg cgttcacgta tcgccaccac cgaaccgggc acgaaagtga
    10081 agctgggcct gctgcgcgat ggtaagccgc tggaggtgga agtcacgctg gattccaata
    10141 cctcttcttc cgccagcgcc gaaatgatcg ccccggcgtt gcaaggcgcg acgttgagcg
    10201 acggccagct gaaagacggg acgaaaggcg ttaaggttga tagcgtcgaa aaaagcagtc
    10261 ctgccgcgca ggccggtttg caaaaagatg atgttatcat cggcgttaat cgcgatcgca
    10321 tcagttctat cgccgaaatg cgcaaagtga tggcggcaaa accgtccatc attgctcttc
    10381 aggtagtacg cggcaacgag aacatttatc tattgctgcg ctaatcctgt cttaaaccgg
    10441 gcatcagcct gcgatgtgat gtccggttaa ctcatggtat gctgctgccg ttcccttttt
    10501 taacgacgcc tccatcatgt ttgtgaagct cttacgttcg gtcgcaatag gtttaattgt
    10561 cggcgctatt ctgttggccg tcatgccttc tttgcgcaaa attaatccta tcgccgtccc
    10621 gcaattcgac agtaccgatg agacgccagc cagttataat tttgcggttc gccgcgccgc
    10681 gcctgccgtc gtcaatgtct ataaccgcag tatgaacagt accgcgcata atcaactgga
    10741 gatccgcacg ctgggttccg gcgtgatcat ggatcaacgc ggttatatta ttaccaacaa
    10801 gcacgtgatt aacgatgccg atcagattat cgtcgcgcta caggatggcc gcgtctttga
    10861 agcgctactg gttggctccg attcgcttac cgacctggcg gtgctgaaga tcaacgccac
    10921 tggcgggctg cctaccatcc cgattaatac aaagcgtaca ccgcatattg gcgacgtcgt
    10981 actggctatc ggcaacccat ataatctggg acagaccatc acccagggga tcatcagcgc
    11041 aacgggtcgt atcggcctga acccgacggg gcgacagaat tttctccaga ccgacgcctc
    11101 gattaaccac ggtaattccg gcggcgcgct ggtcaactcg ttaggcgaac tgatggggat
    11161 caacaccctc tcttttgata agagtaacga tggcgaaacg ccggaaggcc ttggttttgc
    11221 gattcccttc cagctagcca cgaaaattat ggataagctt atccgcgacg gtcgcgtgat
    11281 tcgcggctat atcggtattg gcggacgaga aatcgcgccg ctgcacgcgc agcagggtag
    11341 cggcatggac ccgattcagg gcattgtcgt taatgaagta acgccaaacg gccccgctgc
    11401 gcttgccggt attcaggtta atgatttgat tatttcggtc aataataaac ccgccgtgtc
    11461 cgcgctggag acgatggatc aggtggcgga aattcgcccg ggctccgtca ttccggtcgt
    11521 ggtaatgcgg gatgataagc agctcacgtt ccaggtgacg gtgcaggaat acccggcgtc
    11581 aaactaaaac gacgcagctt ttgcctgcgt cgttcgacgg ctagtcaata aagactggcc
    11641 ctgccggaaa atgcgccagg aaactcgtga agattagcag agcggggaaa ctcttttccc
    11701 cgacggcctc ttcacgcagc gccttatcga gtgtcaataa gccagactcg ctcccttccc
    11761 ccagaatgcc gcccatccag agcagtcgtt gcgcctgttg acgcgcatac tgcgatgcgc
    11821 ttttccaggc gaccagatgc agcaacgttt gtaacagcag gacccgagac gcgtgaccat
    11881 cgcgttgtaa tcgcctgaat acgggtaatg caatactacg caccgtcgag aaaccgctcg
    11941 ccgcctcccc ctcaatcggc gataaaccaa cagccgcctg tttgacgaaa tcgcataacc
    12001 gattgtgtgt taatggccgc tcgcctgcgc tcatataccc tgcggcgaaa cagagtaacc
    12061 cgataccctg agcccaatcg gtcgatggca gaatcccctg cggaacattc ggtgccgacg
    12121 tctgtgcggc acaaagcccc tcgtcgtaac actgtgcaaa acgttgctca tatattgctg
    12181 agttgacgcc ggaccacggc agcaaatgca gcgctggctc aagctcagtt atctgattca
    12241 ccgtctcaac aacataacgc aagatggttt ctctggatgg catggatgta ccttgccgaa
    12301 acgcaaccat ttcactcatt actgtgtcct cattttgcgg gagcataatc actgctcccg
    12361 attagaattg gattacattg ccagcacgta cttcagcatc acgcccgccg caatggccga
    12421 accgataacc ccggccacgt tcggccccat cgcgtgcatc agcaggaagt tctgcgggtt
    12481 cgactccagg cccaccttgt tcgacaccct ggc
//
LOCUS       DAGWFR010000115        12506 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.117, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000115 DAGWFR010000000
VERSION     DAGWFR010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 12506)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12506)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12506
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.117"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(32..790)
                     /gene="chbG"
                     /locus_tag="MOX77_003215"
     CDS             complement(32..790)
                     /gene="chbG"
                     /locus_tag="MOX77_003215"
                     /EC_number="3.5.1.105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chitin disaccharide deacetylase"
                     /protein_id="HCA3358668.1"
                     /translation="MERVLIVNADDFGLSKGQNYGIVEAYRNGVVTSTTALVNGEAID
                     HAAQLSRELPALGVGMHFVLTLGKPVSEMPGLTRDGLLGKWIWQMAEEDTLPLDEIAH
                     ELACQYQRFIDVFGREPTHLDSHHHVHMFPQIFPIVARFAAQRGIALRIDRQTVLNAD
                     DLPSDLRSTQGFSSEFYGEEITEACFLRILDASAHRGEASLEVMCHPAFVDNIIRQSA
                     YCYPRLTELEVLTSASLKAGIAERVYRPGSFLDI"
     gene            complement(803..2158)
                     /locus_tag="MOX77_003216"
     CDS             complement(803..2158)
                     /locus_tag="MOX77_003216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase"
                     /protein_id="HCA3358669.1"
                     /translation="MSQKLKVVTIGGGSSYTPELLEGFIKRYHELPVTELWLVDVEDG
                     KKKLGIIYDLCQRMIDKAGVPLKLYKTLDRREALKGANFVTTQLRVGQLKARELDERI
                     PLSHGYLGQETNGAGGLFKGLRTIPVIFDIIKDVEELCPNAWVINFTNPAGMVTEAVY
                     RHTNFKKFIGVCNIPVDMKMFIHDVLALNENDDLSIDLFGLNHMVFIKDVLVNGTSRF
                     AELLDGVASGQLKASTVKNIFDLPFSEGLIRSLNMLPCSYLLYYFKQKEMLAIEMGEY
                     YKGGARAQVVQKVEKQLFDLYKNPELNVKPKELEQRGGAYYSDAACEVINAIYNDKQT
                     EHYVNIPHHGHVENIPADWAVEMTCILGRNGATPHPRITRFDEKVLGLIHTIKGFEVA
                     ASNAALSGNFNDVLLALNLSPLVHSDRDAEVLARELILAHEKWLPNFAACIEALKGKH
                     H"
     gene            complement(2283..3125)
                     /gene="chbR"
                     /locus_tag="MOX77_003217"
     CDS             complement(2283..3125)
                     /gene="chbR"
                     /locus_tag="MOX77_003217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator ChbR"
                     /protein_id="HCA3358670.1"
                     /translation="MMQLQVNATEIKTVYEQQLFNGKNFHVFIYNKTESVTGLHQHDY
                     YEFTLVLTGRYYQEINGKRVLLERGDFVFIPVGSNHQSFYEFGATRILNVGISKRFFE
                     QHYLPLLPFCFVASQVYRANSTFLTYIETVIASLNFRGNGLDEFIEVVTFYIINRLRH
                     YREEQVYDDIPQWLKATVEIMHDKTQFGEHALENMVRLSAKSQEYLTRATRRYYSKTP
                     MQIINEIRINFAKKQLEMTNYSVTDIAYEAGYSSPSLFIKTFKKMTSFTPNSYRKRLT
                     EINE"
     gene            complement(3136..3483)
                     /gene="chbA"
                     /locus_tag="MOX77_003218"
     CDS             complement(3136..3483)
                     /gene="chbA"
                     /locus_tag="MOX77_003218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS N,N'-diacetylchitobiose transporter subunit
                     IIA"
                     /protein_id="HCA3358671.1"
                     /translation="MFDLENVVDNQTAAEELEEVVMGLIINSGQARSLAYGALRKAKE
                     GDFEAAKAMMDQSRIALNEAHLVQTKLIEGDQGEGKMKVSLVLVHAQDHLMASMLARE
                     LIAELIELHEKLK"
     gene            complement(3534..4892)
                     /gene="chbC"
                     /locus_tag="MOX77_003219"
     CDS             complement(3534..4892)
                     /gene="chbC"
                     /locus_tag="MOX77_003219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS N,N'-diacetylchitobiose transporter subunit
                     IIC"
                     /protein_id="HCA3358672.1"
                     /translation="MSNVIASLEKVLLPFAVKIGKQPHVNAIKNGFIRLMPLTLAGAM
                     FVLINNVFLSFGEGAFFYSMGIRLDASTIETLNGLKGIGGNVYNGTLGIMSLMAPFFI
                     GMALAEERKVDALAAGLLSVAAFMTVTPYSVGEAYAVGANWLGGANIISGIIIGLVVA
                     EMFTFIVRRNWVIKLPDSVPASVSRSFSALIPGFIILSIMGIIAWALSNYGSNFHQII
                     MDTISTPLASLGSVVGWAYVIFVPLLWFFGIHGSLALTALDSGIMTPWALENISIYQQ
                     YGSVDAALEAGKTFHIWAKPMLDSYIFLGGSGATLGLIIAIFLASRRADYRQVAKLAL
                     PSGIFQINEPILFGLPIIMNPVMFIPFILVQPILAAITLVAYYLGIIPPITNIAPWTM
                     PTGLGAFFNTNGSVAALLVALFNLAVATLIYLPFVVVANKAQNAIEQEESEEDIANAL
                     KF"
     gene            complement(4975..5295)
                     /gene="chbB"
                     /locus_tag="MOX77_003220"
     CDS             complement(4975..5295)
                     /gene="chbB"
                     /locus_tag="MOX77_003220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS N,N'-diacetylchitobiose transporter subunit
                     IIB"
                     /protein_id="HCA3358673.1"
                     /translation="MEKKHIYLFCSAGMSTSLLVSKMRAQAEKYEVPVIIEAFPETLA
                     GEKGPAADVVLLGPQIAYMLPEIQRLLPGKPVEVIDSMLYGKVDGLGVLKAAVAAIKK
                     AAAN"
     gene            complement(5596..5937)
                     /gene="osmE"
                     /locus_tag="MOX77_003221"
     CDS             complement(5596..5937)
                     /gene="osmE"
                     /locus_tag="MOX77_003221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmotically-inducible lipoprotein OsmE"
                     /protein_id="HCA3358674.1"
                     /translation="MNKNVAGILSAAAVMTMLAGCTAYDRTKDQFVEPVVKDVKKGMS
                     RAQVAQIAGKPSSEVSMIHARGTCQTYILGQRDGKAETYFVALDDTGHVINSGYQTCA
                     EYDTDPQAPKQ"
     gene            6155..6982
                     /gene="nadE"
                     /locus_tag="MOX77_003222"
     CDS             6155..6982
                     /gene="nadE"
                     /locus_tag="MOX77_003222"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-dependent NAD(+) synthetase"
                     /protein_id="HCA3358675.1"
                     /translation="MTLQQEIIQALGAKPHINPEEEIRRSVDFLKAYLKTYPFLKSLV
                     LGISGGQDSTLAGKLSQMAITELREETGDNALQFIAVRLPYGVQADEQDCQDAIAFIQ
                     PDRVLTVNIKGAVLASEQALREAGIELSDFVRGNEKARERMKAQYSIAGMTHGVVVGT
                     DHAAEAITGFFTKYGDGGTDINPLHRLNKRQGKQLLAALGCPEHLYKKVPTADLEDDR
                     PSLPDEAALGVTYDNIDDYLEGKTLDSAIAKTIEGWYVKTEHKRRLPITVFDDFWKK"
     gene            7103..7984
                     /gene="cho"
                     /locus_tag="MOX77_003223"
     CDS             7103..7984
                     /gene="cho"
                     /locus_tag="MOX77_003223"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011233065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease Cho"
                     /protein_id="HCA3358676.1"
                     /translation="MVRRQSAPRLEFEAAAIYEYPEHLRPFLSEAPALPGVYIFHSES
                     DTLPLYIGKSVNIRSRVLSHLRTPDEAAMLRQARRISWICTAGEMGALLLEARLIKEQ
                     QPLFNKRLRRNRQLCSLQLSEQKIEVVSARSVDFSHEPNLFGLFANRRAALQSLQNLA
                     DEQKLCYGLLGLEPVSRGRACFRFALKRCAGACCGQETPQAHFLRLQASLERLRVVCW
                     PWKGAIALKESRPQMTQFHIINNWLWLGAVPSLDEAATLVRTPAGFDQDGYKILCKPL
                     MSGQYEIIELHTDCRQS"
     gene            complement(8059..8544)
                     /gene="spy"
                     /locus_tag="MOX77_003224"
     CDS             complement(8059..8544)
                     /gene="spy"
                     /locus_tag="MOX77_003224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-independent periplasmic protein-refolding
                     chaperone"
                     /protein_id="HCA3358677.1"
                     /translation="MRKLTALFVASTLAMGAANLAHAAETTTAAPADAKPMMQHKGKF
                     GPHHDMMFKNLNLTDAQKQQIRDIIKAQREQMERPLLEERRAMHDIIASDTFDKAKAE
                     AQITKMEAQRKANMLAHMETQNKIYNVLTPEQKKQYNANFEKRLTERPAQEGKMPAAA
                     E"
     gene            complement(8880..9848)
                     /gene="astE"
                     /locus_tag="MOX77_003225"
     CDS             complement(8880..9848)
                     /gene="astE"
                     /locus_tag="MOX77_003225"
                     /EC_number="3.5.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinylglutamate desuccinylase"
                     /protein_id="HCA3358678.1"
                     /translation="MDNFLALTLSGTTPRVTQGKGAGFRWRWLGHGLLELTPDAPVDR
                     ALILSAGIHGNETAPVEMLDKLLSALYSGSLTLTWRVLVVLGNPQALAAGIRYCHSDM
                     NRMFGGRWQSFAESDETRRARELELSLETFFSSGQARVRWHLDLHTAIRGSHHLRFGV
                     LPQRDRPWEADFLAWLGAAGLEALVFHQAPGGTFTHFSSEHFGALSCTLELGKALPFG
                     QNDLTQFSVTSQALSALLSGVETSTSFSPPLRYRVVSQITRHSDKFALYMDAQTLNFT
                     AFAKGTLLAEEGDKRVTVTHDVEYVLFPNSSVACGLRAGLMLERLP"
     gene            complement(9841..11184)
                     /gene="astB"
                     /locus_tag="MOX77_003226"
     CDS             complement(9841..11184)
                     /gene="astB"
                     /locus_tag="MOX77_003226"
                     /EC_number="3.5.3.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-succinylarginine dihydrolase"
                     /protein_id="HCA3358679.1"
                     /translation="MTAHEVNFDGLVGLTHHYAGLSFGNEASTRHRFQVSNPRLAVKQ
                     GLLKMKALADAGFPQAVIPPHERPFIPALRQLGFTGSDEQILDKVARQAPRWLSSVSS
                     ASPMWVANAATVCPSADALDGKVHLTVANLNNKFHRALEAPVTEALLRAIFRDESQFS
                     VHSALPQVALLGDEGAANHNRLGGEYGSAGVQLFVYGREEENEIRPARYPARQSREAS
                     EAVARLNQVNPQQVIFAQQNPEVIDQGVFHNDVIAVSNRQVLFCHEAAFARQKVLINQ
                     LRTRVDGFMAIEVPAGEVSVSDAVATYLFNSQLLSRDDGSMLLVLPRECQDHAGVWRY
                     LNKLVAEDNPISAMQVFDLRESMANGGGPACLRLRVVLTEEERRAVNPAVMMNDALFT
                     ALNAWADRYYRDRLTAADLADPLLLREGREALDVLTRLLDLGSVYPFQQTGAADG"
     gene            complement(11181..12506)
                     /gene="astD"
                     /locus_tag="MOX77_003227"
                     /pseudo
     CDS             complement(11181..12506)
                     /gene="astD"
                     /locus_tag="MOX77_003227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460271.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="succinylglutamate-semialdehyde dehydrogenase"
BASE COUNT         3105 a         3502 c         2974 g         2925 t
ORIGIN      
        1 gcggcgcatt cttgcgccgc aaactcagga gctaaatatc aagaaaactg ccaggacgat
       61 atacacgttc cgcaatccct gccttgagtg acgcagacgt caacacctcc agttcagtta
      121 agcgggggta acaataggcg ctctggcgaa taatgttgtc cacaaacgcc ggatgacaca
      181 tcacctccag agaggcttct cctcgatgcg ccgaggcatc cagaatgcgt aaaaagcacg
      241 cttcggtgat ctcctcgccg taaaattcac tactaaatcc ttgagtgctg cgcaaatccg
      301 acggcagatc gtctgcattc aacaccgtct ggcggtcaat acgtaacgca atcccgcgct
      361 gcgccgcaaa gcgggcgacg atggggaaaa tttgcgggaa catatgcaca tgatgatgac
      421 tgtcgagatg cgttggctcg cggccaaata cgtcgatgaa acgctgatac tgacacgcca
      481 gttcatgcgc aatttcatcc agcggaagcg tatcctcctc cgccatttgc cagatccatt
      541 tccccaacag gccgtctcgc gtcaggcccg gcatctctga caccggtttg cctaacgtca
      601 aaacaaaatg cattcccacc ccaagcgcag gcagctcgcg gctaagctgc gccgcatggt
      661 caatagcctc gccattgacc agcgccgtcg tggaggtcac aacgccgttg cgatatgctt
      721 caacaatgcc gtaattttgc cctttactca ggccaaaatc atcggcattc acaatcaaca
      781 cgcgttccat agcctacctc tgtcagtggt gcttaccttt aagcgcttcg atgcaagcgg
      841 caaaattagg cagccatttt tcatgcgcca gaatgagctc acgcgccagg acttctgcgt
      901 ctcggtcgga atgcaccagc ggactcaggt taagcgccag cagcacatca ttaaagtttc
      961 cgctcagcgc cgcattgctg gccgcgacct caaatccttt aatagtgtgg ataagcccca
     1021 gcactttttc gtcaaaacgg gtgatacgcg ggtgcggcgt cgcgccattg cgtcccagaa
     1081 tgcaggtcat ttccaccgcc cagtccgccg ggatattctc gacatgccca tgatgtggaa
     1141 tattaacata atgctcagtc tgcttgtcat tataaatagc gttaatgact tcacaagcgg
     1201 catcggaata ataagcgccg ccgcgttgct caagctcttt cggcttcacg tttagctcag
     1261 gatttttgta caagtcgaag agttgtttct ccactttttg tacgacctga gcgcgcgcgc
     1321 cgcctttgta atattcgccc atttcaatcg ccagcatctc tttttgcttg aagtaataca
     1381 acaaataaga gcacggcagc atgttcagcg agcgaatcaa tccttcacta aacggcagat
     1441 caaagatatt ttttacggtt gacgctttca actgaccgga cgccacgcca tccagtaatt
     1501 ctgcgaaccg tgaggtgcca ttcaccagca catctttaat aaagaccata tggtttagac
     1561 caaacaggtc aatggaaaga tcgtcattct cattcagcgc cagcacgtca tgaataaaca
     1621 ttttcatgtc gacaggaata ttacatacgc cgatgaattt tttaaagttg gtatgacgat
     1681 aaaccgcttc cgtcaccatc cccgccgggt tagtaaagtt aatgacccac gcattcggac
     1741 ataattcttc aacatcctta atgatgtcaa aaataaccgg aatggtacgc aaccctttaa
     1801 ataaaccgcc agcgccgttg gtttcttgcc ccagatagcc gtggctaagc gggatacgct
     1861 cgtccagctc acgggctttg agttgaccaa cgcgtagctg ggtagtgaca aaattagcgc
     1921 ctttcagcgc ttcccggcga tccagcgttt tatacaattt tagcggaacg cctgctttat
     1981 caatcattcg ctggcagaga tcataaataa tgcccagctt ctttttcccg tcttcaacgt
     2041 caaccagcca taattcggtg acaggtaatt catggtagcg cttaataaag ccttcaagta
     2101 attcaggggt gtagctgctc ccgccaccaa tagtgacgac ttttaatttc tggctcataa
     2161 tatctccctt cagtgtatga cactgatatg tattacgcta tgcccgctcg taagaaatag
     2221 cgtgacgttc cccgcgctat tggggcaagc gtgaaatgta actaatcgag caatgtaaac
     2281 cgttactcat taatttccgt caatcgcttc cgataactat tcggcgtgaa tgaggtcatc
     2341 ttcttaaacg ttttaataaa cagacttgga ctactgtacc cggcttcata agcaatatcc
     2401 gtaaccgaat agttggtcat ttccaactgt ttcttggcaa aattaatgcg aatctcatta
     2461 atgatttgca tcggcgtttt gctgtaataa cgtcgggtgg cgcgcgtcag atactcctgg
     2521 gattttgccg acaggcgcac catattttcc agcgcatgtt cgccaaactg cgttttatca
     2581 tgcattatct ccacggttgc tttcagccat tgtggaatat catcataaac ctgctcttcg
     2641 cggtaatgac gtaagcggtt tataatataa aatgtcacca cttcgataaa ttcgtcgagc
     2701 ccattgccgc gaaaattcaa cgacgcaatc accgtttcaa tataggtaag gaaggtgcta
     2761 ttcgccctgt atacctgcga tgccacaaaa caaaacggca gtaacggaag ataatgctgt
     2821 tcaaaaaaac gtttactaat tcctacgttc agaatacgcg ttgcgccaaa ctcatagaaa
     2881 ctttggtgat tcgaccccac cgggataaaa acaaaatctc cacgttccag cagcacacgc
     2941 ttcccgttaa tctcctggta ataacgtccg gttaatacca gggtaaattc ataatagtcg
     3001 tgctgatgca gcccggtgac gctttccgtc ttgttataga taaacacatg gaaatttttg
     3061 ccattgaaga gctgctgctc ataaaccgtt ttgatttccg ttgcgttaac ctgtagctgc
     3121 atcatccgcc ccctgttatt tcagtttctc atggagctca atcaactcag cgatcagttc
     3181 acgagccagc attgaggcca tcaaatgatc ctgagcgtga accaggacca gactgacttt
     3241 cattttgcct tcgccctgat cgccttcgat gagttttgtc tgcacaagat gcgcttcatt
     3301 gagcgctatg cgcgactggt ccatcatcgc tttcgccgcc tcaaagtcgc cttctttcgc
     3361 ttttctgagc gcgccatatg ccaggctgcg cgcctgacca gaattgatga taagccccat
     3421 aacgacttct tcgagttcct cagccgctgt ctggttatct acaacatttt caagatcaaa
     3481 catagtcttt cctctgattc agcccggcat ggcatcccat gccgacgcgg agtttagaat
     3541 ttcagtgcgt tagcgatatc ttcttcgctt tcttcctgct cgatggcgtt ctgcgctttg
     3601 ttagccacca ccacgaaggg gagataaatc agggtagcga ccgccaggtt aaatagcgca
     3661 accagcaacg cggcgacact gccgttggtg ttaaagaacg cccccagccc ggttggcatg
     3721 gtccacggcg caatattggt aatcggcgga ataataccca aatagtaagc caccagcgta
     3781 atcgccgcca gaatcggctg aaccagaatg aaggggataa acatcaccgg gttcataata
     3841 atcggcaggc caaacaggat gggttcgtta atctggaaga tacctgacgg cagcgccagt
     3901 tttgccacct ggcgatagtc cgcgcgacgg gatgccagga agatagcgat gatcagaccc
     3961 agcgttgcgc cgctaccacc gaggaagata taagaatcca gcatcggttt cgcccagata
     4021 tggaacgttt taccggcttc cagcgccgca tcgacggagc catactgctg gtaaatagag
     4081 atgttttcca gcgcccaggg cgtcatgatg ccgctgtcca gcgcggtcag cgccagcgaa
     4141 ccatgaatac caaagaacca cagcagcggt acaaaaatga catatgccca ccctaccacg
     4201 ctacccagcg atgccagcgg cgtagagata gtgtccataa taatctgatg gaagttagaa
     4261 ccgtaattag acagcgccca ggcaataatc cccataatag agagaataat aaagccggga
     4321 attaatgctg agaatgaacg agacaccgaa gccggtacgc tgtccggtag tttaatcacc
     4381 cagttgcgcc ggacaataaa tgtaaacatc tccgcgacca ccaggccaat aataataccg
     4441 gagataatat tcgcgccgcc cagccagtta gcgcctacgg cataggcctc gccgacacta
     4501 tacggcgtta cggtcataaa tgccgccacg gagagcagtc cggcggccag cgcatcaacc
     4561 ttgcgctctt ccgccagcgc catgccgata aaaaatggcg ccatgagcga cataatgccc
     4621 aatgtgccgt tatagacgtt cccgccgatg cctttcaatc cattaagtgt ttcaatggtt
     4681 gaggcatcaa gccgaatgcc catggaataa aaaaacgccc cctccccaaa gctcaggaaa
     4741 acgttattaa ttaatacaaa catcgccccc gcaagggtta atggcattaa acgaataaag
     4801 ccgttcttga ttgcattaac gtgtggctgc tttcctattt ttacagcaaa aggaaggagt
     4861 accttttcaa gtgaagcaat aacgttactc atagaaaaat acccttaaat accgcaataa
     4921 aatattgcgg ttagtgtatg aaataactct ttgacgggaa aaattaaaaa ataattaatt
     4981 cgcggcggct tttttaattg ccgctaccgc agctttaagc acgcctaagc catctacctt
     5041 gccgtacaac attgaatcaa tgacttctac cggtttaccg ggtaataaac gctgaatttc
     5101 ggggagcata taagcaattt gcgggcctaa taacacgacg tccgctgccg ggcctttttc
     5161 accggccagg gtttcaggga atgcttcaat aatcaccggc acttcatatt tttcagcctg
     5221 agcgcgcatt tttgatacca gtaacgatgt tgacatgccc gcagaacaaa acagataaat
     5281 gtgtttcttt tccataaaaa ccttcctcat gtgcgattat ctgtcaacca gatacgccgc
     5341 aagcctcaac ctgcatccat actctgggcg acttgcgtaa ccggatttac ttttttaggt
     5401 ggctgaaatg agtatacggg atcggaccgc cggatggtat ttccttgacc tactaaattg
     5461 tctctcattg acctggcgtt atgacccccc tcacatttcg ggcaaataat tcgcgataat
     5521 aaataaggtt atggcaggca caaaaaaacc ggctcgcagg ccggtttcct tgaatgttca
     5581 ggcaatgtac agttgttact gcttcggcgc ctgtgggtca gtgtcgtact ccgcacaggt
     5641 ctggtagccg gagttaatca cgtgcccggt atcatccagc gcaacaaagt aggtttccgc
     5701 tttaccatca cgttgaccca ggatgtaggt ctgacaggta ccacgcgcat gaatcatgct
     5761 cacttcagat gacggtttgc ccgcaatctg cgcaacttgc gccctgctca ttcctttttt
     5821 aacatcttta acgacaggct caacaaattg gtcttttgta cgatcatacg ccgtacagcc
     5881 tgccagcata gtcattaccg ccgctgcgct taaaattcct gctacgttct tgttcatttt
     5941 ccgtcctctt gtttatcagc gtgttatgta agcctggaat acatcagaac atttttcaag
     6001 ccgcgcctcg cgacaaaaag tctttcggaa aattctctaa cgcagcgata tgttgtttta
     6061 aacaccgctt agcccgccaa accttgtcgt ttcagcggcg aagggttagc tttaacaggg
     6121 taaagattca ttttttaatg tcgaaggggg ttaaatgact ctgcagcaag agataatcca
     6181 ggcgcttggc gcgaaaccgc atatcaaccc tgaagaagaa attcgccgca gcgtggattt
     6241 tcttaaagcg tacctgaaaa cctatccctt tttgaaatcg ctggtgttag gcatcagcgg
     6301 cgggcaggat tcgacgctgg ccgggaaact cagccagatg gctatcaccg aattgcggga
     6361 agagaccggt gataatgcgc tgcagtttat cgccgttcgt ctgccttatg gcgtgcaggc
     6421 cgatgaacag gattgccagg acgccattgc ttttattcag ccggacagag tactcaccgt
     6481 caatattaaa ggcgccgtcc tcgccagcga acaggcgctg cgcgaagcgg gaattgagct
     6541 gagcgatttt gttcgcggca atgaaaaagc gcgtgagcga atgaaagcgc aatatagcat
     6601 cgccggtatg actcacggcg tcgtggtggg caccgaccat gcggcggaag cgataaccgg
     6661 gttcttcacc aaatatggcg atggcggtac cgatattaac ccgcttcatc gccttaacaa
     6721 acgccagggc aaacagcttc tcgcagcgct gggctgtcct gagcatctgt ataaaaaagt
     6781 ccccaccgcc gatttggaag acgaccgccc ttcactgcct gatgaagccg cgctgggcgt
     6841 aacgtatgac aatattgacg attacctgga aggcaaaacg ctggactccg ccatcgctaa
     6901 aactatcgaa ggctggtacg taaaaactga acataagcgc cgtttaccga ttacggtatt
     6961 cgacgacttt tggaaaaagt aagcgtactt ctactgttgt gccggatatc gctcgtctat
     7021 ccggcctcct ctcttcccag cctctttttt aatcacccat ccgctgttat actggatgaa
     7081 taaccagtta acggagatca ctgtggtacg gcgtcaatca gccccccgcc ttgagtttga
     7141 agcagcggcc atttacgaat atccagaaca tttacgtcct ttcctcagcg aagcgccagc
     7201 cttaccgggc gtctatatat ttcatagcga aagcgatacg ctgccgcttt atatcggtaa
     7261 aagcgtaaat attcgcagcc gggtgctctc acatctgcga acgcctgacg aggccgctat
     7321 gctgcgacag gcgcggcgga taagctggat ctgcaccgct ggggaaatgg gcgcgttgct
     7381 gctggaggcg cgactgatca aagaacaaca gccgctgttt aacaagcggt tacgtcgtaa
     7441 tcgccagctt tgctctctac agttgagcga acaaaagatt gaggtcgttt ccgcccgcag
     7501 cgtcgatttt tcccatgagc cgaacctgtt tggactcttc gccaaccgtc gggcagcgct
     7561 gcaaagctta cagaacctcg ccgatgaaca aaaattgtgt tatggcctgc tggggcttga
     7621 accggtaagc cgtgggcgcg cctgttttcg tttcgcgctg aagcgctgcg ctggcgcgtg
     7681 ttgtgggcaa gaaaccccgc aggcgcattt tcttcgtctg caggcctcac tggaacggtt
     7741 acgtgtggtt tgctggccct ggaaaggcgc tatcgcgtta aaagagagcc gcccacaaat
     7801 gacccagttc cacattatca acaactggtt atggctgggg gcggtaccct cgctggatga
     7861 ggccgccacc ctggtgcgca cccctgcggg ctttgatcag gatggctata aaattctctg
     7921 taagccacta atgtcaggtc aatatgagat cattgaactg cacaccgact gtcgccagtc
     7981 ataaagaaaa ccgccgatcc tgtccacctc aacgattgtg ttgtcgacaa gaccggcggt
     8041 cttaaattat gcggaaagtt attctgccgc agcaggcatt ttaccttctt gcgccgggcg
     8101 ttctgtcaga cgcttctcaa aattagcgtt atattgcttt ttctgctccg gcgtcagaac
     8161 gttataaatt ttattctggg tttccatatg cgccagcata ttggccttgc gctgtgcttc
     8221 cattttcgta atttgcgctt cggctttggc tttatcgaag gtatcgctgg caataatatc
     8281 atgcatggcg cgacgctctt ccagcagcgg acgttccatt tgctcgcgct gcgcttttat
     8341 aatgtcgcga atttgttgct tctgcgcgtc tgtcaggttc aggtttttaa acatcatatc
     8401 gtgatgtggg ccaaatttac ctttatgctg catcattggc ttcgcatccg ctggcgcggc
     8461 ggtggtagtc tcagcggcat gagccagatt cgcagcaccc atcgccaggg tagaggcaac
     8521 aaatagagca gtcagtttac gcatatttcc atccttcctt tcagttattt ttacggcata
     8581 tttaaaacag cgccgtgttg tcgtgattaa ctttaaccgt cttagcgtca attagtcaga
     8641 acaacggtaa aacaatgaaa gtataaaaaa cactttttcg ccaattgtga agaaaaaaag
     8701 aataaattgc gcagagttga aagagaaata tacaacagca tgatatagca gaaattatgc
     8761 agaactataa cgcagcaacg cttattaata aagcaattct ctaggaataa tccgtaatag
     8821 catgaaactg tgtcccaaat catccctgta atcctaacgt gagcttacag ggacatttat
     8881 cagggcagtc tttccagcat taatccagcc cgcaatccgc aggcgacaga ggaattagga
     8941 aagagaacat attcaacgtc atgcgtcacc gtcacgcgct tatccccctc ctcggccagc
     9001 aacgttccct tcgcaaaggc agtaaaattc agcgtttgcg catccatata aagcgcgaac
     9061 ttgtcgctgt gacgcgtgat ttgcgacacc acccgatagc gtagcggcgg cgaaaacgag
     9121 gttgacgttt cgacaccgct cagcaacgcc gacaacgcct gcgaggttac gctgaactgc
     9181 gtcagatcgt tttgcccaaa cggcaacgcc tttcccaact ccagcgtaca ggaaagcgcg
     9241 ccgaaatgtt cagagctaaa gtgcgtaaac gtaccgccgg gcgcctgatg aaataccaac
     9301 gcctccagtc ctgccgcgcc cagccacgcc agaaaatccg cctcccacgg gcggtcgcgc
     9361 tgcggcaata cgccaaaacg caaatgatgc gagccacgaa tggcggtatg cagatccaga
     9421 tgccagcgta cccgcgcctg gccagatgaa aagaaggtct ccagacttag ctccagctca
     9481 cgcgcccgcc gcgtttcatc gctttcggca aaggactgcc aacgcccgcc aaacatacgg
     9541 ttcatatcac tgtgacaata gcgtattccc gccgccagcg cctgcggatt gccgagtacc
     9601 accagcactc gccacgttaa cgtcaagctg cctgaataca gcgccgacag cagcttatcc
     9661 agcatctcga ccggcgcggt ttcattaccg tgtatccccg cagaaagaat taacgcgcgg
     9721 tcgaccggcg catcgggcgt gagttcaagc agaccatggc ctaaccagcg ccagcgaaaa
     9781 cccgcgccct tcccctgcgt cacccgtggt gtcgtgccgc ttagcgtcaa cgccagaaag
     9841 ttatccatca gccgcccccg tttgctggaa aggataaacc gaccccaaat ccagcagacg
     9901 cgttaacaca tccagcgcct cccggccttc tcgcaataat aacggatcgg ccagatcggc
     9961 agcggtcagg cgatcgcgat aataacgatc cgcccacgcg ttaagggccg taaacagagc
    10021 gtcattcatc attaccgctg gattcaccgc ccgtcgttct tcttctgtta acaccacgcg
    10081 taatcgcaga caggccgggc cgccgccgtt ggccatactt tctcgcaaat caaacacctg
    10141 catcgcgctg atggggttat cctccgccac cagcttattc agatagcgcc agacgccggc
    10201 atggtcctga cattcccgcg gcaacactaa cagcattgag ccgtcgtcac ggcttaacaa
    10261 ctgactatta aacaggtagg tggccacagc atctgataca gaaacctctc cggcgggcac
    10321 ctctatcgcc ataaaaccgt caacgcgcgt acgcaactga ttaatgagca ctttctgccg
    10381 ggcaaacgcc gcttcgtgac aaaacaatac ctgtcgattc gaaacggcga tgacatcatt
    10441 atggaatacg ccttgatcga tgacctccgg gttttgctga gcgaagataa cctgttgcgg
    10501 attcacctga ttaagacgcg ccacggcctc gctggcttcg cggctctggc gcgccggata
    10561 acgagcgggt cgtatttcat tctcctcttc gcgcccatag acaaaaagct gcacgcctgc
    10621 cgaaccatac tcgccgccaa gacggttatg attcgccgcg ccttcatctc ccaataatgc
    10681 gacctgcggt aacgcgctat gcactgaaaa ctgactttca tcgcgaaata tggcgcgtag
    10741 cagcgcttcg gtaacaggcg cctcaagagc gcgatgaaat ttattgttta aattcgccac
    10801 cgtcaggtga actttcccgt ccagcgcgtc tgccgatggg caaaccgtcg ccgcattcgc
    10861 aacccacatt ggcgacgcgg aactcacgct ggaaagccag cgtggcgcct gacgcgcaac
    10921 cttatccaga atctgctcat cgctacccgt gaagccgagc tgacgtaacg ccggaataaa
    10981 gggccgctca tgcggcggga tcaccgcctg gggaaagccg gcatccgcca gagctttcat
    11041 ctttagcagc ccctgcttta ccgccagacg aggattcgac acctgaaaac ggtggcgggt
    11101 cgatgcctca ttgccgaagg atagcccggc ataatggtgc gtaagcccca ccagcccgtc
    11161 aaaattaact tcatgcgccg tcataccgcc tccctgcgag aaaagtcgag gccagggctt
    11221 aatgtcgcag gcaacgtcag ttcgggagat tccagactgg ccatcggcca ggcgcaataa
    11281 tcggcggcat accaggcgct gggccgatgg ttgccagacg cgccgacacc accaaacggc
    11341 gcagtactcg ctgccccggt gagcggttta tttcagttaa cgatccctgc ccgcgcctcc
    11401 agcaagagtt gttcgaactg cgcgcgatcc gtcgacacca gcccacacga cagaccaaaa
    11461 cgggtattat tcgccagacg aatcgcctca tcgaaatgcg cataacgcca gacgttcagc
    11521 agcggaccaa acacctcttc atccggcaca tccgcgacgc ccgtcagctc aatgatgcca
    11581 ggcgtcagca gagaggttcc ctctttgacc ttccgcggcg ccagtagcgt gcgaccgcct
    11641 aatgcctctc gttgacgcca ggcctccatc acatgctgtg ccgcctgcgc tgaaatcagt
    11701 ccgccgataa acggctgcgg gtcgtcgtcc catctgccgg gctgcagacg tccggcgacg
    11761 tcaactagcc gcgccagaaa tgcatctccc tgcgcgccct gttttaccag aaggcgtcgc
    11821 gcgcaagtac agcgctgtcc ggcggtaata aacgccgatt gcagcgtcag atgtaccgcc
    11881 gcatccatat ttgtcgcatc ctcaataatg agcgggttgt ttccgcccat ttcaagagcc
    11941 aggatttttt ccggctggcc ggatagctga cgatgaagct gatatccggt actggcgctg
    12001 ccggtaaaca gcagtccgtc gagatcgtcg agcgaactca gcgcttgtcc ggtctcccgg
    12061 ccgccctgca ccagattaag aacgcctgcc ggtaaccccg cccgttccca gagttttatt
    12121 accgtttccc cggtccatgg cgttagctcg ctaggtttga agatcagcgt attgcctgcc
    12181 agcaacgcgg gcacaatatg gccattcggt aaatggccgg gaaagttata agggccgaat
    12241 accgccagca caccgtgagg acgatggcgc agcgtcgcgg caccatcgac aagttcgctt
    12301 ttttgttcgc cggttctggc atggtaagcc ttaatcgaga tggcaatctt attgatcatc
    12361 gccgtcactt ccgtcgccgc ctcccagcgc ggtttaccgg tttcacgcgc gatgacctcc
    12421 gtgagatcgg ctttatgcgc ctccagcagg acggaaaatt tctctacgat agcctgccgt
    12481 gccgcaaaag gctgtctggc ccagcg
//
LOCUS       DAGWFR010000116        12505 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.118, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000116 DAGWFR010000000
VERSION     DAGWFR010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 12505)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12505)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12505
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.118"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..115
                     /locus_tag="MOX77_003228"
     CDS             <1..115
                     /locus_tag="MOX77_003228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358680.1"
                     /translation="TVAEAQKRAYALMTDIRWDGSFSRNDIGWRAIEREQN"
     gene            complement(112..1437)
                     /gene="zraR"
                     /locus_tag="MOX77_003229"
     CDS             complement(112..1437)
                     /gene="zraR"
                     /locus_tag="MOX77_003229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent response regulator
                     transcription factor ZraR"
                     /protein_id="HCA3358681.1"
                     /translation="MIRGKIDILVVDDDVSHCTILQALLRGWGYNVALAYSGHDALAQ
                     VREKVFDLVLCDVRMAEMDGIATLKEIKALNPAIPILIMTAFSSVETAVEALKAGALD
                     YLIKPLDFDRLQETLEKALAHTRETGAELPSASAAQFGMIGSSPAMQHLLNEIAMVAP
                     SDATVLIHGDSGTGKELVARALHACSARSDKPLVTLNCAALNESLLESELFGHEKGAF
                     TGADKRREGRFVEADGGTLFLDEIGDISPLMQVRLLRAIQEREVQRVGSNQTISVDVW
                     LIAATHRDLAEEVSAGRFRQDLYYRLNVVAIEMPSLRQRREDIPLLADHFLRRFAERN
                     RKAVKGFTPQAMDLLIHYDWPGNIRELENAIERAVVLLTGEYISERELPLAIAATPIK
                     AENSAEIQPLVDVEKEVILAALEKTGGNKTEAARQLGITRKTLLAKLSR"
     gene            complement(1443..2840)
                     /gene="zraS"
                     /locus_tag="MOX77_003230"
     CDS             complement(1443..2840)
                     /gene="zraS"
                     /locus_tag="MOX77_003230"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     ZraS"
                     /protein_id="HCA3358682.1"
                     /translation="MSFIRLHKDAAAMWLSRLLPAAIFILVGLFSIMVIRDYGRESAA
                     ARQTLLEKGNVLIRALESGTRVGMGMRMHHAQQQTLLEEMAGQPGVLWFAVTDAQGVI
                     ITHSNPGMVGKSLYSPSEMHQLNPGPQECWRRVDVAANGETVPALEIYRQFQPLFGMR
                     GHGMRGHGMARSANDDEPAKQTIFIAFDASELAATQAREWRNTLIVLSALAAVLLATL
                     LAFFWYQRYQRSHRELLDAMKRKEKLVAMGHLAAGVAHEIRNPLSSIKGLAKYFAERT
                     PAGGESHELAQVMAKEADRLNRVVSELLELVKPAHLTLQAVNLNDIITHSLNLVSQDA
                     QSREIQLRFTANETLKRIQADPDRLTQVLLNLYLNAIHAIGRQGTITVEAKESGTDRV
                     IITVTDSGKGIAPDQLEAIFTPYFTTKADGTGLGLAVVQNIIEQHGGAIKVKSIEGKG
                     AVFTIWLPVIARQQD"
     gene            3094..3549
                     /gene="zraP"
                     /locus_tag="MOX77_003231"
     CDS             3094..3549
                     /gene="zraP"
                     /locus_tag="MOX77_003231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc resistance sensor/chaperone ZraP"
                     /protein_id="HCA3358683.1"
                     /translation="MKRNNKSAIALIALSLLALSSGAAFAGHHWGNNDGMWQQGGSPL
                     TTEQQATAQKIYDDYYTQTSALRQQLISKRYEYNALLTASSPDTAKINAVAKEMESLG
                     QKLDEQRVKRDVAMAQAGIPRGAGMGYGGCGGYGGGYHRGGGHMGMGNW"
     gene            complement(3591..4283)
                     /locus_tag="MOX77_003232"
     CDS             complement(3591..4283)
                     /locus_tag="MOX77_003232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1481 domain-containing protein"
                     /protein_id="HCA3358684.1"
                     /translation="MNSFIEGACQPLLSVWRRAFLFSGALLLTACSHNASPPPFTASG
                     FAGDHGAVRIWRKDTNDEVHLLSVFSPWHSGSTTTSEYRWQGDTLSLIELNIYSKPPE
                     HIRARFDAHGELSFMQREVGGQKQQLSNDQIALYRYRAEQIRQTSDALRLGRVILRQG
                     RWHADHTVTTCEGETLKPDLDSWAISHIERRQNHSSVEVSVAWLEAPEGSQLLLVANS
                     DFCHWQPQAKTF"
     gene            complement(4295..4567)
                     /gene="hupA"
                     /locus_tag="MOX77_003233"
     CDS             complement(4295..4567)
                     /gene="hupA"
                     /locus_tag="MOX77_003233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein HU-alpha"
                     /protein_id="HCA3358685.1"
                     /translation="MNKTQLIDVIADKAELSKTQAKAALESTLAAITESLKEGDAVQL
                     VGFGTFKVNHRAERTGRNPQTGKEIKIAAANVPAFVSGKALKDAVK"
     gene            complement(4754..5344)
                     /locus_tag="MOX77_003234"
     CDS             complement(4754..5344)
                     /locus_tag="MOX77_003234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjaG family protein"
                     /protein_id="HCA3358686.1"
                     /translation="MLQNPIHLRLERLESWQHVTFMACLCERMYPNYAMFCKQTEFGD
                     GQIYRRILDLIWETLTVKDAKVNFDSQLEKFEEAIPAADDYDLYGVYPAIDACVALSE
                     LMHSRLSGETLEHAIEVSKTSITTVAMLEMTQAGREMTDEELKTNPAVEQEWDIQWEI
                     FRLLADCEERDIELIKGLRADLREAGESNIGINFQQ"
     gene            complement(5386..6057)
                     /gene="nfi"
                     /locus_tag="MOX77_003235"
     CDS             complement(5386..6057)
                     /gene="nfi"
                     /locus_tag="MOX77_003235"
                     /EC_number="3.1.21.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease V"
                     /protein_id="HCA3358687.1"
                     /translation="MDLASLRAQQIELASSVCREDRLDKDPPAFIGGADVGFEQGGEV
                     TRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAAWEQLSQKPDLLFV
                     DGHGISHPRRLGVASHFGLLVDVPTIGVAKKRLCGKFEPLSAEPGALSPLMDKGEQLA
                     WVWRSKARCNPLFIATGHRVSTDSALAWVQRCMKGYRLPEPTRWADAVASGRPAFVRW
                     QEIQR"
     gene            complement(6067..7131)
                     /gene="hemE"
                     /locus_tag="MOX77_003236"
     CDS             complement(6067..7131)
                     /gene="hemE"
                     /locus_tag="MOX77_003236"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000137620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HCA3358688.1"
                     /translation="MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAG
                     DFMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTAP
                     VTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGS
                     SKAFTVIKKMMYADPQALHLLLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRD
                     YQQFSLYYMHKIVDGLLRENDGRRVPVTLFTKGGGQWLEAMAETGCDALGLDWTTDIA
                     DARRRVGHKVALQGNMDPSMLYAPPARIEDEVATILAGFGQGEGHVFNLGHGIHQDVP
                     PEHAGAFVEAVHRLSAQYHN"
     gene            complement(7172..7945)
                     /gene="nudC"
                     /locus_tag="MOX77_003237"
     CDS             complement(7172..7945)
                     /gene="nudC"
                     /locus_tag="MOX77_003237"
                     /EC_number="3.6.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) diphosphatase"
                     /protein_id="HCA3358689.1"
                     /translation="MDRIIEKLESGWWIVSHEQKLWLPYGELPHGLAANFDLVGQRAL
                     RIGEWQGEPVWLVLQHRRHDMGSVRQVIDQDAGLFQLAGRGVQLAEFYRSHKFCGYCG
                     HPMHPSKTEWAMLCSHCRDRYYPQIAPCIIVAIRREDSILLARHVRHRNGVHTVLAGF
                     VEVGETLEQAVAREVMEESGIKVKNLRYVTSQPWPFPQSLMTAFMAEYDSGEIVIDPK
                     ELLEANWYRYDDLPLLPPPGTVARRLIEDTVAMCRAEYD"
     gene            8038..8526
                     /gene="rsd"
                     /locus_tag="MOX77_003238"
     CDS             8038..8526
                     /gene="rsd"
                     /locus_tag="MOX77_003238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma D regulator"
                     /protein_id="HCA3358690.1"
                     /translation="MLNQLENLMERVGGSNKLVDRWLDVRKHLLVAYYNLVGIKPGKE
                     SYMRLNEKALDDFCQSLVDYLSAGHFSIYERILHKLEGNGQLLHAAKIWPLLEDNTQR
                     IMDYYDTSLETAIDHDNCLEFQQALSDIGEALEARFVLEDKLIMLVFDAMHDGARVKR
                     PA"
     regulatory      8641..8804
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            8890..10785
                     /gene="thiC"
                     /locus_tag="MOX77_003239"
     CDS             8890..10785
                     /gene="thiC"
                     /locus_tag="MOX77_003239"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HCA3358691.1"
                     /translation="MSTTTLTRREQRAKAQHFIDTLEGTAFPNSKRIYVTGSQHDIRV
                     PMREIQLSPTLIGGSKDNPQFEENEAVPVYDTSGPYGDPEVAINVQQGLAKLRQPWID
                     ARNDSEELDDRSSAYTRERLADDGLDDLRFTGLLTPKRAKAGKRVTQLHYARQGIVTP
                     EMEFIAIRENMGRERIRSEVLRHQHPGMNFGARLPENITPEFVRDEVAAGRAIIPANI
                     NHPESEPMIIGRNFLVKVNANIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYI
                     HETREWILRNSPVPIGTVPIYQALEKVNGIAEDLTWEAFRDTLLEQAEQGVDYFTIHA
                     GVLLRYVPMTAKRLTGIVSRGGSIMAKWCLSHHKENFLFEHFREICEICSAYDVSLSL
                     GDGLRPGSIQDANDEAQFSELHTLGELTNIAWEYDVQVMIEGPGHVPMHMIQRNMTEE
                     LESCHEAPFYTLGPLTTDIAPGYDHFTSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKE
                     DVKQGLITYKIAAHAADLAKGHPGAQIRDNAMSKARFEFRWEDQFNLALDPFTARAYH
                     DETLPQESGKVAHFCSMCGPKFCSMKISQEVRDYAAAQAIEVGMADMSENFRAKGGEI
                     YLKREEA"
     gene            10785..11420
                     /gene="thiE"
                     /locus_tag="MOX77_003240"
     CDS             10785..11420
                     /gene="thiE"
                     /locus_tag="MOX77_003240"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HCA3358692.1"
                     /translation="MYQPDFPTVPFRLGLYPVVDSVAWIERLLEAGVRTIQLRIKDKR
                     DEEVEADVIAAIALGRCYDARLFINDYWRLAIKHNAYGVHLGQEDLETTDLKAIQAAG
                     LRLGVSTHDDMEIDIALAAKPSYIALGHVFPTQTKQMPSAPQGLAQLARHIERLADYP
                     TVAIGGISLERAPAVLATGVGSIAVVSAITQAADWRAATAQLLAIAGVGDE"
     gene            11413..12171
                     /locus_tag="MOX77_003241"
     CDS             11413..12171
                     /locus_tag="MOX77_003241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HesA/MoeB/ThiF family protein"
                     /protein_id="HCA3358693.1"
                     /translation="MNDRDFMRYSRQILLGDIAIEGQQKLLNSHVLIVGLGGLGSPAA
                     LYLAGAGIGTLTLADDDDVHLSNLQRQILFTTDDIARSKSQVAQQHLTRLNPDIELVS
                     LQQRLKGDALRHAVARADVVLDCTDNMATRQEINAACVALNTPLITASAVGFGGQVMV
                     LTPPWEQGCYRCLWPDDVEPERNCRTAGIVGPVVGVMGTLQALEAIKLLSGIETPSGE
                     LRLFDGKTSQWRSLALRRASGCPVCGGRHANSIQ"
     gene            12152..12352
                     /gene="thiS"
                     /locus_tag="MOX77_003242"
     CDS             12152..12352
                     /gene="thiS"
                     /locus_tag="MOX77_003242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HCA3358694.1"
                     /translation="MQIQFNDEPMQCAEGQTVSSLLATLNQLQPGAALALNQQILPRE
                     QWRQHIVQEGDQILLFQVIAGG"
     gene            12354..>12505
                     /locus_tag="MOX77_003243"
     CDS             12354..>12505
                     /locus_tag="MOX77_003243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HCA3358695.1"
                     /translation="MLRIADKTFDSHLFTGTGKFASSQLMVEAIRASGSQLVTLAMKR
                     VDLRQH"
BASE COUNT         2840 a         3649 c         3295 g         2721 t
ORIGIN      
        1 caccgtggcc gaagcgcaga aacgcgctta cgccctgatg accgacatcc gctgggacgg
       61 cagcttcagc cgtaacgaca ttggctggcg cgccattgag cgtgagcaaa actaacggct
      121 gagtttagcc agcagcgttt tgcgcgtaat gcccaattga cgggcggctt ccgttttgtt
      181 gccgcccgtt ttttccagcg ccgccagaat cacctctttc tccacatcga ccaacggttg
      241 gatttcggcg ctgttttccg cttttatcgg cgtcgcggca atagcgagag gcaattcgcg
      301 ttcagaaatg tattctcccg tcagcaacac caccgctcgt tcgatagcgt tttccagctc
      361 acggatatta cccggccagt cgtagtggat cagcagatcc atcgcctgcg gcgtaaaccc
      421 cttcaccgct tttcggttac gttcggcaaa acgccgcaga aaatggtctg ccagtagcgg
      481 aatatcttcc cgacgctggc gcaaagaagg catttcaatc gccaccacat tcaggcggta
      541 atagagatcc tggcgaaagc gaccggcact cacctcttcc gccaggtcgc ggtgggtagc
      601 ggcaattaac caaacatcca cagatatcgt ctggttactt cccacgcgtt gcacttcgcg
      661 ctcctgaatc gcccgcagca aacgtacctg cattaacggc gagatatcgc cgatttcatc
      721 aagaaacaat gtcccgccgt cagcttcgac aaagcgtccc tcccgacgtt tatccgcgcc
      781 ggtaaacgcg cctttttcgt gtccgaacag ctcagactcc agcagcgatt cattaagcgc
      841 cgcgcagttg agcgtgacca gcggtttatc gctcctggcg ctacaggcgt gcagcgcccg
      901 cgccaccagc tctttacccg tgccggagtc tccgtgaatc aataccgtgg cgtctgatgg
      961 tgcgaccatc gcgatttcat tcaataaatg ttgcatcgcc gggctgctgc caatcatgcc
     1021 aaattgcgca gccgacgccg atggcaattc agcgcccgtt tcccgcgtat gcgccaacgc
     1081 cttttccagc gtctcctgca gacggtcaaa atccagcggt ttaattaaat agtcgagcgc
     1141 gccggctttc aacgcctcta ccgccgtttc cacgctggag aatgccgtca taatcaaaat
     1201 cggaatggcg gggttgagcg ctttaatctc cttcagcgtg gcgataccgt ccatctccgc
     1261 catacgcaca tcgcacagta ccagatcaaa gactttctca cgcacctgag ccaacgcatc
     1321 atgcccactg taggccagag cgacgttata gccccagccc cgaagcagcg cctgtaaaat
     1381 cgtgcagtgg cttacatcat catccacaac cagaatatcg atttttccgc gtatcaccct
     1441 tgttaatcct gttgtctcgc tatcactggc aaccagatag taaagaccgc gcctttaccc
     1501 tcaatacttt tcaccttaat cgcgccgcca tgctgttcga tgatattttg caccaccgcc
     1561 agccccaggc ctgtcccgtc agctttggtc gtaaaataag gtgtaaaaat cgcctccagc
     1621 tgatccgggg caatcccttt cccgctatcg gtaacagtga tgataacgcg gtcggtccca
     1681 ctttcttttg cctctacggt aatcgttccc tggcggccaa tcgcatgaat agcgttcagg
     1741 tacaaattca acagcacctg agtcagcctg tccgggtcag cctgaatacg cttaagcgtc
     1801 tcattcgccg tgaatctcaa ctgaatctct ctgctttggg catcctgact gaccagattc
     1861 agggagtgag taataatatc attgaggtta accgcctgga gcgtcagatg cgcgggcttt
     1921 accagttcga gcaattcgct taccacccgg ttcaaacggt cggcctcttt ggccatcacc
     1981 tgcgccagtt catgcgactc gccgccggca ggcgtgcgct cggcaaagta tttcgccagc
     2041 cctttgatgg acgagagcgg gttacgaatt tcgtgcgcga cgcccgccgc cagatgcccc
     2101 atcgccacca acttttcttt acgcttcatt gcatcaagca gttctctgtg cgagcgctga
     2161 taacgctgat accaaaaaaa cgccagtaac gttgccaaca gcaccgccgc taacgcagac
     2221 aaaacaatca gcgtattacg ccactccctt gcctgagtcg cggccagctc gctggcgtca
     2281 aaggcaataa aaatagtttg tttcgctggt tcgtcgtcat tggcgctacg cgccatgccg
     2341 tgccccctca taccgtgacc tctcataccg aaaagcggct ggaactgacg gtaaatttcc
     2401 agcgcaggca ccgtctcgcc gttagcagca acgtcgacac gccgccaaca ctcctgcggc
     2461 ccggggttta gttgatgcat ttcagatggg gaatagagcg acttgcccac catgccaggg
     2521 ttgctatgag tgatgattac cccctgtgca tccgttacag cgaaccacaa cacgcctggc
     2581 tgacccgcca tctcttccag caatgtctgc tgctgcgcgt gatgcatccg cattcccata
     2641 cctactcgcg tgccggactc cagagcgcga atgagtacat ttcccttttc cagcagcgtc
     2701 tgcctggcgg cagcgctctc acggccatag tcgcgaatga ccataatgga aaatagcccc
     2761 accagaatga agatcgccgc aggtaacagc cgactcaacc acattgcagc ggcatcttta
     2821 tgtaatcgta taaaactcac aggcttcccc ggctcgtttt tattttcctt acttaagcag
     2881 agatcatgcc attcttcgct ccgcataacc gcgcgttgtc gcacaccctt tcggatacgg
     2941 atgggtaaaa atgactcgcc aggcgggtca tgcgagtcat ttttactcgc tttttgccgc
     3001 ctgaagcggg ttaactcgct gcccgacaag gaatagttac ctggcacgga agatgcaaga
     3061 gagaggataa gatgagcaac aggagaacgc aaaatgaaac ggaacaataa atcagctatc
     3121 gcgctaatcg ccctctctct tttggccctg agctccggcg ccgccttcgc cgggcatcac
     3181 tggggcaaca atgacggtat gtggcaacag ggaggtagcc cgttaaccac ggaacagcag
     3241 gcgacggcgc agaagattta tgatgattac tatacgcaga ccagcgcgct gcgccagcaa
     3301 ctgatatcca aacgttatga atacaacgcg ctactgaccg ccagttcgcc ggatactgcg
     3361 aaaattaacg cggttgccaa agagatggag tcattaggcc agaagttaga tgagcaacgc
     3421 gtgaaacggg atgtcgcgat ggcgcaggct ggcataccac gcggcgcagg aatgggctat
     3481 ggcggttgcg gcggctatgg cggcggttat catcgcggcg gcggtcatat gggtatggga
     3541 aactggtaaa gcatgtttgc cgaatggcgg cttcgccatt cggtattcca tcaaaaggtt
     3601 ttcgcttgcg gctgccagtg acagaaatct gaattcgcca ccagcaaaag ttgcgatcct
     3661 tccggcgcct ccagccatgc tacgctcacc tctaccgatg agtggttctg gcggcgctca
     3721 atgtggctta ttgcccaaga atccagatcc ggtttcagcg tttcaccttc acaggtggtt
     3781 accgtatggt cggcgtgcca gcgtccctgg cgtagtatga cccgccccag gcgcaatgcg
     3841 tcgctggtct gacggatttg ttcggcacga tagcgataca aggcaatctg atcgttggaa
     3901 agctgctgct tctgcccccc gacttcacgc tgcataaaac tgagttcgcc atgagcgtcg
     3961 aaacgcgcgc gaatatgttc tggcggtttg ctgtaaatat tgagttcaat aagcgaaagc
     4021 gtatcaccct gccaacgata ttcgctggtc gtcgtgctac cactatgcca cgggctaaaa
     4081 acagaaagca gatggacttc atcgttcgta tctttacgcc agatacgcac cgcgccgtga
     4141 tcgccggcaa agccgctggc agtaaacgga ggcggtgaag cgttatgact gcaggcagtc
     4201 agcaacagcg cgccagaaaa cagaaacgcg cgacgccaga cggacaaaag gggctgacaa
     4261 gccccttcga taaaactgtt cacagttacg cgtcttactt aactgcgtct ttcagagctt
     4321 taccagaaac aaacgccggt acgttagcgg cggcgatttt gatttcttta ccggtctgtg
     4381 ggttacggcc agtgcgctca gcacggtggt tcactttgaa ggtaccgaaa ccaaccagtt
     4441 gtacagcatc gccttctttc agagactcag taatagcagc cagagtggat tccagagcag
     4501 ctttagcctg ggttttggac agttctgctt tgtctgcaat tacatcaatc agttgagtct
     4561 tgttcataag ttatccttac aatgtgttta tcgcttgcta agcatcgagt gcgacggaaa
     4621 tgccagaaaa gcactctcct gcatacacgc accgatagcc actttttttc gcctcccaaa
     4681 tgtagaccag acggggggca taagggaagc cttatggcac gacaaatcag acgttaaatc
     4741 acgttttctg gtgtcattgc tgaaaattta taccgatatt gctctcgcca gcctcgcgca
     4801 ggtctgccct gagccctttt atcagttcaa tatcacgttc ttcgcagtcg gctaaaagtc
     4861 ggaatatttc ccactgaata tcccattcct gttcaacggc agggttcgtt ttgagctcct
     4921 catcggtcat ttcccgacca gcctgagtca tttccaacat cgctaccgta gtaatggaag
     4981 tcttactaac ctcaatagca tgttccagcg tttcgccgct aagacgagaa tgcattaatt
     5041 cgcttaatgc gacgcaggca tcaatcgccg ggtaaacgcc gtacaaatca tagtcgtcgg
     5101 ctgccggaat tgcctcttca aacttctcca gttggctatc gaaattgacc tttgcatctt
     5161 tcaccgtcag ggtttcccag atcagatcca gaatgcgacg gtagatctgt ccgtcgccga
     5221 attccgtctg cttgcaaaac atggcgtagt tcgggtacat gcgctcgcac aagcaggcca
     5281 taaaggtaac gtgctgccaa ctttccagcc gctccagccg caaatgaatc gggttttgta
     5341 acatgatgga atctcgaatc ggaaattagc ggcagtttac ctgaatcagc gctgaatttc
     5401 ttgccaacga acaaacgccg gacgcccgga agcgacggca tccgcccagc gcgtcggctc
     5461 cggcaggcga taccctttca tacagcgctg tacccacgcc agcgcgctgt cagtactgac
     5521 ccggtgccct gtcgcgataa acagcggatt acagcgcgcc ttgctgcgcc atacccacgc
     5581 cagttgctcg cctttatcca ttaaggggct aagtgcgcca ggttcggcgg aaagtggttc
     5641 aaatttaccg catagccgtt ttttcgccac gccgatggtc ggcacgtcca ccaacagtcc
     5701 aaaatgactg gcgacgccaa gccgacgcgg atgcgaaata ccgtgaccgt ccacaaacag
     5761 caaatcgggc ttttgcgaga gctgttccca cgctgccagc agcgcaggat attcacgaaa
     5821 agagagaaag ccggggatat acggcatggt ggtggcaata cgcgccacct tgtactctac
     5881 tagctcaagc gacggatatt tcagcaatac catcgccgcc cgcgtcacct cgccgccctg
     5941 ctcaaaaccg acgtccgccc cgccgataaa cgctggcgga tctttgtcca ggcgatcttc
     6001 gcggcaaact gatgaagcaa gttctatctg ttgagcgcgt agcgacgcga gatccatact
     6061 aactccttag ttgtgatact gcgcagaaag tcggtgcact gcctccacaa atgcgccagc
     6121 atgttctggc ggcacatcct gatggatgcc atgtccaagg ttaaagacgt gcccttctcc
     6181 ctgaccgaaa ccagcaagta tagtcgctac ctcgtcttcg atccgtgccg gcggcgcata
     6241 cagcatggac ggatccatat tgccctgcag cgccacttta tggccaacgc gacggcgcgc
     6301 atcggcgata tctgtcgtcc agtcgagacc cagcgcatcg cagccggttt ccgccatcgc
     6361 ctccagccac tgaccgccac ctttagtgaa cagcgttacc ggcacgcggc gaccgtcgtt
     6421 ttcacgcagc aggccatcga cgattttatg catgtagtag agggagaact gctggtaatc
     6481 gcggccagtc agcacgccgc cccaggtgtc gaaaatcatc accgactgcg cgcccgcttt
     6541 gatttgcgcg ttgaggtaca gcgtgacgct tttcgccaac ttatccagca gcagatgcaa
     6601 cgcctgcggg tcagcgtaca tcatcttttt aatcaccgtg aaggctttgc tactgccgcc
     6661 ttccaccatg taagtcgcca gcgtccacgg gctgccggag aagccgatca gcggaacctc
     6721 gccttttagt tcgcggcgaa tcgtgcgtac cgcattcatc acgtagccca gttcatcctc
     6781 cggatcggga atgggcagct tatcgacatc ggctttgcag gtgacagggg ccgtaaagcg
     6841 cgggccttcc ccggcttcaa aatagagccc caggcccatc gcgtccggaa tcgtcaggat
     6901 atccgagaaa aggatcgccg catcaagcgg ataacggcgc agcggctgta aagtgacttc
     6961 gcaggccagt tcggcatttt tgcacagcga cataaaatcg cccgcctgag cgcgagtggc
     7021 tttgtactcc ggtagataac ggcccgcctg gcgcatcatc cacactggcg taacatcaac
     7081 gggctggcgc agcagcgcac gtagataacg atcgtttttg agttcggtca tttttacatt
     7141 cctttagcgt tgatgcgccc agtgtaacat gtcagtcgta ttcagcccga cacattgcca
     7201 ccgtatcttc gatcaaacgg cgcgcgacgg tgcccggcgg cggcagtagc ggcagatcgt
     7261 cataacggta ccaatttgct tccaacagtt ctttcgggtc gatgacaatc tcgccgctgt
     7321 catactctgc cataaacgcc gtcatcagcg actgtgggaa cggccacggc tgcgaggtca
     7381 cgtagcgcag atttttcacc ttgatcccgc tttcctccat gacttcgcgc gccacagcct
     7441 gctccagggt ttcgccgact tcaacaaacc cggccagtac cgtatgcacg ccgttgcggt
     7501 ggcgaacgtg ccgggcaagt agaatagaat cctcacggcg aatggcaaca ataatgcagg
     7561 gggcgatttg cgggtagtaa cgatcgcggc aatggctgca cagcatcgcc cattcggttt
     7621 tactcgggtg catagggtgc ccgcaatagc cgcaaaattt atgcgaacga taaaactccg
     7681 ccaactgtac gccacgtccc gccagttgaa acagcccggc atcctgatcg ataacctggc
     7741 gaaccgatcc catatcatga cgtcgatgct gtaacaccag ccagacgggc tcgccttgcc
     7801 attcacctat ccggagtgcg cgctgcccca caagatcgaa atttgccgcc agcccgtgtg
     7861 gtaattcccc atacggcaac cataattttt gttcatggct gacgatccac cagccactct
     7921 ctaatttttc aattatacga tccatagcta ttgcactacc tttgcttcac tggcatgttg
     7981 ttaacattat ttttacattc atggcgagca gcctttatct aacttgcgga gacaatcatg
     8041 ctaaaccagc tggaaaacct gatggagcgc gttggcggaa gcaacaaact ggtcgatcgc
     8101 tggctggatg tacgtaagca cctgctcgtg gcttactaca atctggttgg cattaagcct
     8161 ggcaaagaat cgtacatgcg gctgaatgaa aaagcgctgg atgatttttg tcagagcctg
     8221 gtcgattacc tttccgccgg gcacttcagt atttatgaac gtattctcca taaattggaa
     8281 ggaaacggtc agcttttaca tgcggcaaaa atttggccgc tgctggaaga taatacgcag
     8341 cgcattatgg attattacga caccagcctg gaaactgcca tcgatcacga taattgtctc
     8401 gaatttcaac aagctctgtc agatatcggc gaagcgctgg aagcccgctt tgtgctggaa
     8461 gacaagctga ttatgctggt gtttgacgcg atgcacgacg gcgccagagt caaacgtccc
     8521 gcttgagttc tgcgcgagta acaggtagtt tacttcagcc ccctcttcgg aggggcggtt
     8581 atcttgtcgg agtgctaatt ttccacaaaa gcgttcgtga tgcgtcaagg cggcaagtcg
     8641 gtgaatctcc aggagcttac ataagtaagt gactggagtg agcggacgaa gccaacgaag
     8701 aggcagcgcg aaggatgaag tggaaaaggc tgagaccgtt aattcgggat ccgcggaacc
     8761 tgatcaggtt aatacctgcg aagggaacaa gagtaattct gctttatgct gctgccttta
     8821 cgggcggcgc acatccatta ctccatccgt cgtctgacaa gccacgtcct taattttttg
     8881 gaatgagcta tgtctacaac aacgttaacc cgccgcgagc agcgcgctaa agcccagcat
     8941 tttatcgata cgctggaagg gactgccttt cccaactcga aacgcatcta cgtgaccggt
     9001 tcgcagcatg atattcgcgt accgatgcgc gaaattcaac ttagccctac gctcatcggc
     9061 ggcagtaaag acaacccgca gtttgaagag aacgaagccg taccggtata cgacacctcc
     9121 ggcccctatg gcgatcctga agtggcgatt aacgtccagc agggtctggc gaaactgcgc
     9181 cagccgtgga ttgacgcacg taacgatagc gaagaattag acgaccgtag ctcggcttac
     9241 accagagaac gtctggccga cgatggcctg gacgatctgc gttttaccgg cctgctgacg
     9301 ccgaaacgcg ctaaagcggg caagcgcgtc acccagttac actacgcccg ccaggggatc
     9361 gtcactcccg aaatggagtt catcgccatc cgtgaaaaca tgggccgcga gcgcattcgc
     9421 agtgaagtgc tgcgccacca gcatccgggc atgaactttg gcgcgcgcct gccggaaaac
     9481 attacgccgg aattcgtgcg tgatgaagtc gccgcgggcc gcgcgattat tcccgccaac
     9541 atcaaccacc cggaatcgga gccgatgatt atcggccgca acttcctggt caaagtgaat
     9601 gccaacatcg gtaactcggc ggtcacctcc tccatcgaag aagaggtcga gaagctggtg
     9661 tggtcaaccc gctggggcgc ggacacggtg atggacctct ccaccggtcg ctatattcac
     9721 gaaacccgcg aatggatcct gcgtaacagc ccggtaccga tcggcaccgt cccgatctac
     9781 caggcgctgg aaaaggtcaa cgggatcgcc gaagatctca cctgggaagc gttccgcgac
     9841 acgctgctgg agcaggccga acagggcgtc gactacttca ccatccacgc cggcgtgctg
     9901 ctgcgctacg tgccgatgac cgccaaacgc ctgaccggta ttgtctcgcg cggcggttcg
     9961 atcatggcaa agtggtgtct ctcccatcac aaagagaact tcctgttcga acatttccgc
    10021 gagatttgtg aaatctgctc cgcctacgac gtttccctgt cgctgggcga cggcctgcgc
    10081 cccggctcca ttcaggacgc caacgacgaa gcgcagttct ccgagctgca tacgctgggc
    10141 gagctgacca atatcgcctg ggaatacgac gtgcaggtga tgattgaagg cccgggccac
    10201 gtgccgatgc atatgattca gcgcaacatg accgaagagc tggagagctg ccacgaagcg
    10261 ccgttctaca ccttagggcc gttgaccacc gatatcgcgc cgggctatga ccacttcacc
    10321 tctggcattg gcgcggcgat gatcggctgg tttggctgcg cgatgctgtg ttacgtgacg
    10381 ccgaaagagc atctcggcct gccgaacaaa gaagatgtga agcaggggct gatcacctac
    10441 aaaatcgccg cccacgccgc ggatttagcc aaaggacatc cgggcgcgca gatccgcgat
    10501 aacgccatgt cgaaagcgcg ctttgaattc cgctgggaag atcagtttaa cctcgcgctc
    10561 gacccgttca ccgcccgcgc ttatcacgat gaaaccctgc cgcaggagtc cggtaaggtc
    10621 gcccacttct gttccatgtg tgggccgaag ttctgctcaa tgaaaatcag ccaggaagtg
    10681 cgtgattacg ccgccgcgca agccattgaa gtcggcatgg cggatatgtc ggagaacttc
    10741 cgcgccaaag gcggcgaaat ttatctcaaa cgggaggaag cctgatgtat cagcctgatt
    10801 tcccaaccgt gccgttccgc ctcgggcttt acccggtggt ggacagcgtt gcatggattg
    10861 aacgcctgct ggaggcgggc gtgcgcacca tccagttgcg tatcaaagat aagcgcgatg
    10921 aagaggtgga agccgacgtt atcgccgcca tcgcgctggg gcgttgttat gacgcccgcc
    10981 tgttcatcaa tgattactgg cgtctggcaa ttaagcacaa cgcctacggt gtacatttgg
    11041 gccaggaaga tctcgaaacc actgacctga aggcgattca ggcggcgggg ttacgcctgg
    11101 gcgtatcgac ccacgatgat atggagatag acatcgcact cgccgctaag ccttcttata
    11161 tcgcgctggg tcatgtattc cccacgcaaa ccaagcagat gccttccgcc ccacaggggc
    11221 tggcgcagct ggcgcggcat attgaacgac tggcggatta tcccaccgtc gctatcggcg
    11281 gcatcagcct tgaacgcgct ccggcggtac tagcgaccgg cgtcggcagt attgccgtgg
    11341 tcagcgccat tactcaggct gccgactggc gcgccgctac cgcgcagtta ctggcaatcg
    11401 cgggagtggg cgatgaatga ccgcgatttt atgcgctaca gtcggcaaat cctgctcggc
    11461 gatatcgcga ttgaaggcca gcaaaagctg ctcaatagcc atgtattgat tgtcggctta
    11521 ggcggattgg gttcgcctgc cgcgctgtat ctggcgggag caggcatcgg cacactgacg
    11581 ctggcggatg atgacgatgt tcacttgagc aatctccagc ggcaaattct gttcaccacc
    11641 gacgatatcg cgcgttcgaa atcccaggtt gcccagcagc acctgacacg gctcaacccg
    11701 gatatcgaac tggtatcact ccagcagcga ctaaaaggcg atgcgctccg gcatgcggta
    11761 gcgcgtgccg acgtggtgct cgactgtacc gacaacatgg cgacccgtca ggaaattaac
    11821 gccgcctgcg tggcactcaa cactccgtta attaccgcca gcgccgttgg ttttggcggc
    11881 caagtgatgg tcctcacgcc gccgtgggaa caaggctgtt accgctgcct gtggccagat
    11941 gatgtggagc ctgaacgcaa ctgccgtacc gccggtatcg tcggaccggt tgttggcgtg
    12001 atgggcacct tacaggcgct ggaagcgatt aaattactca gcggtattga gacgcccagt
    12061 ggagagctac gcctgtttga cggtaaaacc agccagtggc gcagcctggc gctgcgtcgt
    12121 gccagcggct gtccggtatg cggagggcga catgcaaatt caattcaatg acgagccgat
    12181 gcagtgcgcc gaagggcaaa ccgtcagcag cctactcgct acgcttaatc agcttcaacc
    12241 gggcgcggcg ctggcgctca atcagcagat cctgccacgc gagcagtggc ggcaacatat
    12301 cgtgcaggaa ggcgaccaga tcctgctttt tcaggttatt gcaggaggtt gagatgttac
    12361 gtattgccga caaaacgttt gattcacatc tgttcaccgg taccgggaag tttgcctcat
    12421 cgcaactgat ggtcgaggca attcgcgctt ccggcagcca actggtgacg ctggcgatga
    12481 agcgcgtgga cctgcgccag cacaa
//
LOCUS       DAGWFR010000117        12470 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.119, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000117 DAGWFR010000000
VERSION     DAGWFR010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 12470)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12470)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12470
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.119"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..420)
                     /locus_tag="MOX77_003244"
     CDS             complement(<1..420)
                     /locus_tag="MOX77_003244"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HCA3358696.1"
                     /translation="MKIVIAPDSFKESLSADKCCQAIKAGFSTVFPDARYVCLPIADG
                     GEGTVDAMVAATGGKRVSVDVSGPMGEKVNGFYGLTGDGKTAIIEMAAASGLMLVAPE
                     ARNPLRASSFGTGELIRHALDAGIRHIILGIGGSATVD"
     gene            complement(443..1741)
                     /locus_tag="MOX77_003245"
     CDS             complement(443..1741)
                     /locus_tag="MOX77_003245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil/xanthine transporter"
                     /protein_id="HCA3358697.1"
                     /translation="MFPVINRESVLSGFQWFFFIFCNTVVVPPTLLSAFHLPADNLLM
                     LTQYAFLTTALACLVQAFCGHRRAIMEGPTGLWWGAILTITLGEASRGTPLNDIASSL
                     SVGIAISAMVTIFIGISGLGHRLARLFTPAVMVFFMLLLGAQLTSIFFKGMLGLPFGI
                     ADTSARIKLAPFGLAVAVMCFILAMIIFLQQRISRYALLVGTVVGWGLWRLCFPSSHL
                     PPGELSWRWFPLGSHGTLMPGIIVTAVMTGLVNISNTYGAIRGTDIFYPHQGSGSSRY
                     RRSFMISGLMTLVTVPFAVVPFSPFVSSIGLLTQTGDSSRKSFICGSALCLLVAIITP
                     LTRLFCAIPLAISSAVMLVSYLPLLYSGLVFSQQITFTARNIYRLALPLFVGIFLMGL
                     PPVYLQDLPLMIRPLLSNGLLVGILLAVLMENLIPWERIK"
     gene            complement(1800..3161)
                     /gene="allB"
                     /locus_tag="MOX77_003246"
     CDS             complement(1800..3161)
                     /gene="allB"
                     /locus_tag="MOX77_003246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="allantoinase AllB"
                     /protein_id="HCA3358698.1"
                     /translation="MSFDLIIKNGTVILENEARVIDIAVQGGKIAAIGENLGEAKNVL
                     DATGLIVSPGMVDAHTHISEPGRTHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDR
                     ETIELKFDAAKGKLTIDAAQLGGLVSYNLDRLHELDEVGVVGFKCFVATCGDRGIDND
                     FRDVNDWQFYKGAQKLGEMDQTVLVHCENALICDELGEEAKREGRVTAHDYVASRPVF
                     TEVEAIRRVLYLAKAAGCRLHVCHISSPEGVEEVTRARQEGQDVTCESCPHYFVLDTD
                     QFEEIGTLAKCSPPIRDQENQKGMWEKLFNGEIDCLVSDHSPCPPEMKAGNIMQAWGG
                     IAGLQNCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLKHKGRIAPGKDADLVFIQ
                     PDSSYVLKNEDLEYRHKVSPYVGRTIGARITKTILRGDVIYDIEHGFPVPPKGQFILK
                     HQQ"
     gene            complement(3240..4694)
                     /locus_tag="MOX77_003247"
                     /pseudo
     CDS             complement(3240..4694)
                     /locus_tag="MOX77_003247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415044.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="putative allantoin permease"
     gene            complement(4790..6037)
                     /locus_tag="MOX77_003248"
     CDS             complement(4790..6037)
                     /locus_tag="MOX77_003248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3358699.1"
                     /translation="MSETKKSGIDYWKQIVVVMSLGWVAIWIYRTVLTPIYPEIQASL
                     DNVSNAEIGAIASFYFFAYCSMQIPCGILVDKFGQKIMLMAGFTLFIIGTLCIAKANG
                     LAMIYTGSLMAGGGCASFFSSAYSLSSANVPQARRALANAIINSGSAIGMGIGLIGSS
                     VLVKNMSMAWQNVLYIVAAILVIMLCVFTLVIRGKAKSDSAQAEKQTQTVTEDEKRAP
                     LFSGLLCSVYFLYFCTCYGYYLIVTWLPSYLQTERGFDGGAIGLASALVAVVGVPGAL
                     FFSHLSDKFRNSKVKVILGLEIVAAAMLAFTVLSPNTTMLMVSLTLYGLLGKMAVDPI
                     LISFVSEQASAKSLGRAFSLFNFFGMSSAVVAPTLTGFISDVTGSKEISFVISACLVV
                     TGTLIFAAVTLYKKKATQRIASA"
     gene            complement(6103..6981)
                     /gene="glxR"
                     /locus_tag="MOX77_003249"
     CDS             complement(6103..6981)
                     /gene="glxR"
                     /locus_tag="MOX77_003249"
                     /EC_number="1.1.1.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxy-3-oxopropionate reductase"
                     /protein_id="HCA3358700.1"
                     /translation="MKLGFIGLGIMGSPMAINLARAGHQLHVTTIGPVADELLSLGAV
                     NVETARQVTEFADIIFIMVPDTPQVEEVLFGEHGCAKTSLQGKTIVDMSSISPIGTKR
                     FAQRVNEMDADYLDAPVSGGEIGAREGTLSIMVGGEQKVFDRVKPLFDILGKNITLVG
                     GNGDGQTCKVANQIIVALNIEAVSEALVFASKAGADPVRVRQALMGGFASSRILEVHG
                     ERMINRTFEPGFKIALHQKDLNLALQSAKALALNLPNTATCQELFNTCAANGGSQLDH
                     SAMVQALELMANHKLS"
     gene            complement(7082..7858)
                     /gene="hyi"
                     /locus_tag="MOX77_003250"
     CDS             complement(7082..7858)
                     /gene="hyi"
                     /locus_tag="MOX77_003250"
                     /EC_number="5.3.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxypyruvate isomerase"
                     /protein_id="HCA3358701.1"
                     /translation="MLRFSANLSMLFTEYDFLERFDKAAQSGFRGVEFMFPYDDDIEV
                     LKRKLRDNNLEHTLHNLPAGDWAAGERGIACIPGREEEFRDGVAAAIRYARALGNKKI
                     NCLVGKTPSGFSATEIYDTLVENLRYAANMLAKEDILLLIEPINHFDMPGFHLTGTQQ
                     ALVLIKDIGSDNIKIQYDIYHMQRMEGELTQTMTAWADKIGHLQIADNPRRGEPGTGE
                     INYDFIFNVIKQSDYDGWVGCEYKPLTTAEAGLSWINQYR"
     gene            complement(7871..9652)
                     /gene="gcl"
                     /locus_tag="MOX77_003251"
     CDS             complement(7871..9652)
                     /gene="gcl"
                     /locus_tag="MOX77_003251"
                     /EC_number="4.1.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxylate carboligase"
                     /protein_id="HCA3358702.1"
                     /translation="MAKMRAVDAAMYVLEKEGITTAFGVPGAAINPFYSAMRKHGGIR
                     HILARHVEGASHMAEGYTRAAAGNIGVCLGTSGPAGTDMITALYSASADSIPILCITG
                     QAPRARLHKEDFQAVDIEAIAKPVSKMAVTVREAALVPRVLQQAFHLMRSGRPGPVLV
                     DLPFDVQVAEIEFDPDMYEPLPVYKPAASRVQIEKALEMLIQSERPVIVAGGGVINAD
                     AAPLLQQFAELINVPVIPTLMGWGCTLDDHPLMAGMVGLQTAHRYGNATLLASDMVFG
                     IGNRFANRHTGSVEKYTQGRKIIHIDIEPTQIGRVLCPDLGIVSDAKAALTLLIDVAQ
                     EMQKAGRLPCRKTWVDECQQRKRTLLRKTHFDNVPVKPQRVYEEMNKAFGRDVCYVTT
                     IGLSQIAAAQMLHVFKDRHWINCGQAGPLGWTIPAALGVCAADPQRNVVAISGDFDFQ
                     FLIEELAVGAQFNIPYIHVLVNNAYLGLIRQSQRAFDMDYCVQLAFENINSSEVNGYG
                     VDHVKVAEGLGCKAIRVFKPEDIAPAFEQAKALMAQYRVPVVVEVILERVTNISMGDE
                     LDNVTEFEEVADSAKDAPTETCFMKYE"
     gene            complement(9737..10555)
                     /gene="allR"
                     /locus_tag="MOX77_003252"
     CDS             complement(9737..10555)
                     /gene="allR"
                     /locus_tag="MOX77_003252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional repressor AllR"
                     /protein_id="HCA3358703.1"
                     /translation="MTEVRRRGRPGQAEPTAQKGAQALERGIAILQYLERSGGSSSVS
                     DISGSLDLPLSTTFRLLKVLQAADFVYQDSQLGWWHIGLGVFNVGSAYIHNRDVLSVA
                     GPFMHRLMLLSGETVNVAIRNGNEAVLIGQKECKSMVRMCAPLGSRLPLHASGAGKAL
                     LYPLTEEELVGIVVNTGLRRFTPTTLVDLPILLKNLERAREQGYTVDQEEHVVGLNCI
                     ASAIYDDAGSVVAAISISGPASRLTEDRFISQGELVRDTAKDISTALGLKPPVA"
     gene            complement(10634..11115)
                     /gene="allA"
                     /locus_tag="MOX77_003253"
                     /pseudo
     CDS             complement(10634..11115)
                     /gene="allA"
                     /locus_tag="MOX77_003253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459510.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ureidoglycolate lyase"
     gene            11342..12268
                     /gene="allS"
                     /locus_tag="MOX77_003254"
     CDS             11342..12268
                     /gene="allS"
                     /locus_tag="MOX77_003254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional activator AllS"
                     /protein_id="HCA3358704.1"
                     /translation="MFDPETLRTFISVAETGSFSKAAERLCKTTATTSYRIKLLEENT
                     GVGLFFRTTRSVSLTAAGSHLLSQAKDWLAWLDSMPDELRQVNDGVERQVNIVVNNLL
                     YSPQAVASLLSWLNARYPFTQFHFSRQIYMGVWDSLLYEGFSLAIGVTGTEPLANTFM
                     LDPLGSVQWRFVMSADHPLAHVSGPLTEAQLRRFPAINIEDSARTLTKRVAWRLPGQK
                     EIIVPDMETKIAAHLAGVGIGFVPQPLCQTLIDKNELVSCTIPTMRPPSPLSLAWHKF
                     GGGKAVEDIVKLFTQRQPEIAGFLSIFNTVRC"
     gene            12338..>12470
                     /locus_tag="MOX77_003255"
     CDS             12338..>12470
                     /locus_tag="MOX77_003255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459508.1"
                     /note="catalyzes the selenophosphate-dependent transfer of
                     selenium from selenophosphate for conversion of
                     2-thiouridine to 2-selenouridine at the wobble position in
                     tRNA; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-selenouridine(34) synthase MnmH"
                     /protein_id="HCA3358705.1"
                     /translation="MQDRQKAQDYRALLLADTPLIDVRAPIEFEQGAMPGAINLPLMM
                     "
BASE COUNT         3307 a         3379 c         2812 g         2972 t
ORIGIN      
        1 atccaccgtg gcgctgccgc cgatacccag aataatatgg cgaattcccg cgtccagggc
       61 gtgacgaatc aattcgcctg tgccgaaact ggatgcccgc agcggattac gcgcctcggg
      121 cgccaccagc atcaatccgc tcgccgccgc catttcaata atcgccgttt tgccgtcgcc
      181 ggtcaggcca taaaatccgt ttactttttc ccccatcggc ccgctaacgt ccacagaaac
      241 ccgtttcccg ccggtcgcag ccaccatcgc atccacggtt ccttctccac catcggcgat
      301 cggtaaacaa acatagcgcg catccggaaa tacggttgaa aatcccgctt taatagcctg
      361 acagcattta tcagcgctta agctctcttt aaatgaatct ggcgcaatta caatcttcat
      421 tatgtctcct tgttttctca cgttatttaa tgcgttccca cggaataaga ttttccataa
      481 gcactgccag taggattccc accagtaatc cgttactaag cagaggacga atcatcagtg
      541 gaagatcctg taaatagacc ggaggaagcc ccatcaaaaa aatgccgaca aaaagcggta
      601 acgccaggcg ataaatattc cgcgcggtaa acgtaatttg ctggctaaaa accaaaccgg
      661 aataaagtaa aggtaaataa gagaccagca taacggcgct gctgatcgcc agtggaatag
      721 cgcaaaataa gcgggttaac ggcgttataa tggcaaccag cagacacagc gcgctaccgc
      781 agataaagga tttgcgagaa ctgtcgccgg tttgcgttaa taaaccaatg gaagatacaa
      841 aaggcgaaaa aggcacgacc gcaaaaggca ccgtcactaa cgtcatcagt ccggaaatca
      901 taaagcttcg gcgataacga gaactgcccg acccttgatg cggataaaag atatcggtac
      961 cgcggatagc gccgtaagtg ttgctgatgt tgactaaccc cgtcatcacc gccgtcacaa
     1021 taatacccgg catcagcgtg ccgtggctgc ccagcggaaa ccatcgccag cttaattcac
     1081 ccggcggtaa gtgtgacgaa ggaaagcata accgccatag cccccacccg accacggtcc
     1141 ctaccagtaa cgcgtaacgg gagatacgct gctgcaagaa aataatcatc gcgaggataa
     1201 aacacatcac cgcgaccgcc agcccaaagg gggccaattt gattctggcg ctggtatcgg
     1261 caatgccaaa aggcagcccc agcatgcctt taaaaaatat tgaggtcagc tgcgcgccca
     1321 aaagcagcat gaaaaaaacc attaccgccg gcgtaaacag gcgagccaga cggtgtccta
     1381 agccgctaat gccgataaat atcgtcacca tcgcggagat cgcgatcccg accgacaggc
     1441 tggaggcgat atcgttcagc ggcgtgccgc gagacgcctc gccaagcgta atcgtaagta
     1501 tagcgcccca ccacaaccct gtcggccctt ccataatggc gcggcgatgg ccgcaaaatg
     1561 cctgaaccag gcaggccaac gcggtggtca gaaaagcgta ttgtgtgagc attaacaggt
     1621 tatcagcggg aagatgaaaa gcggacagca aggtaggggg aaccacaacc gtgttacaga
     1681 aaataaagaa aaaccactga aagccggaca atacactttc gcggttaata acagggaaca
     1741 tatccacacc ttaaaataga gaatgcccgt cgtgacgacg ggcattaaat cacaccggat
     1801 tactgctgat gtttaaggat aaactgacct tttggcggca cagggaagcc atgctcgatg
     1861 tcataaataa catcgccgcg caaaatcgtt ttggtaatac gcgcgccaat agtacggcca
     1921 acatacggac tgactttatg gcgatattcc agatcttcat ttttcagaac atagctgctg
     1981 tcaggctgaa taaagaccag gtcagcatct ttgccggggg caatacgtcc tttatgtttc
     2041 agaccaaaaa tatcggcggc gttggtcgcc attaatttgc caaacatcgg caacgacata
     2101 ccgcgttttt gcaccgcttc atcaaacatg acgtccatgc agttttgcag tccggcaatt
     2161 ccaccccatg cttgcatgat attgcctgct ttcatttccg gaggacatgg agagtggtcg
     2221 gataccaggc agtcgatttc gccgttaaac agtttttccc acatcccttt ctggttttcc
     2281 tggtcgcgaa ttggcggaga acattttgcc agggtgccaa tctcttcgaa ctgatcggta
     2341 tcgaggacaa aatagtgcgg gcacgattca caggtgacat cctggccttc ctgacgcgca
     2401 cgcgttactt cctctacccc ctccgggctg ctgatatgac aaacgtgcag acggcaacct
     2461 gccgctttcg ccagatacag cacgcgacga atggcttcca cttcagtaaa taccggacgt
     2521 gaggcgacat aatcatgcgc cgttacgcga ccttcgcgtt tagcttcttc gcccagctca
     2581 tcgcaaatca gagcattttc gcaatgtacc agtaccgtct ggtccatctc tcccagtttt
     2641 tgcgcgcctt tgtaaaactg ccagtcatta acgtcgcgaa aatcattatc gatgccacga
     2701 tcgccgcagg tggcgacaaa gcacttgaag ccgacaacgc ccacttcgtc cagctcatgc
     2761 agccgatcca ggttataaga gaccaaaccg cccaactgcg cggcgtcgat ggtcaattta
     2821 ccttttgccg cgtcaaactt gagttcaatc gtctcacgat cgaccgtcgc cggcagctga
     2881 ttgagcggca tctcaatcat cgtggtaata ccgcctttcg ccgccgcgcg cgtaccggtt
     2941 tcatagcctt cccagtgggt acggcccggt tcagaaatgt gggtatgcgc gtcaaccatg
     3001 cccggcgaaa cgatcaatcc cgtcgcatcc agcacgtttt tcgcttcccc caggttctcg
     3061 ccaatcgcgg cgatttttcc gccctggacg gcgatatcga taactctcgc ttcgttttct
     3121 aagatgacag taccgttctt aataattaaa tcaaaagaca taacaaactc cttgtatgga
     3181 tacagatagt ttttaaatag tgcacacttc attaaatacg cttaatattt tttcaatagt
     3241 taacctgcga ctttttgctc tcctgtattt tcaaaacccg tgcgtttctt cagtagcgca
     3301 taagcaacga acgcaactat tacgcctaca aaccaggaca cgcgggataa aggctccata
     3361 aatggtataa acttgccgcc taatgacaga atgactgcga ccagggtgac tgaaaatgca
     3421 gtcaggttaa atccattatc ataatatttg taatcaccgc tggcggtgta tagctcatca
     3481 agattaattt ttccacgcat taccacaaaa taatgagcta acattacgcc gattaccggg
     3541 ccaagcatac cgccgataat atcgaggaac agataaatac tgtcctgatt ctccattaat
     3601 ttccatggac aaatcagtag actgataata ctggcaatca ttacgccatt tttatagtta
     3661 agctttgtcg gggtaagcgc cgcaatttga taccccgcag gtataatatt accggtggcg
     3721 ttggttgaaa ttgtcgtcat cagaatcacc agcactgcaa agaatgaagc aaacaggctg
     3781 tcccagcgct gcacaatatc cagcacgttc caggtatcca taccataatg aatactggct
     3841 ccggcaataa tgcacacgct ggctacggcg aataatatat acgctacgat aagccccaat
     3901 gtttgtccca atgcctgagc gcgaaatgaa tgcgcgtttt gcgtgaaatc ggacgcgctc
     3961 accgctggcg cagcccagac ggcgactacg gcgttaatca ccactaggaa cagaaagccg
     4021 ctgtgctctg ctttttgcac gcctgaaggc agatagtcca aaatcgggcc aatgccgacc
     4081 agcgatattg cccaaatagc catgccgcca aagacaatat aaatacatgg attgaggata
     4141 gcggtaaatt tatttaatac tttaccaccg ccaaaaccga tgccaacgtt aatgatccaa
     4201 aaaattagaa aagtaattag ccctggcagt gaaaaaccca gcagcttgaa atctccgcct
     4261 aatgtctaaa atcctggcca gatcttccca attaaaataa gaaatgccag cgatcccgcg
     4321 taacactgta agccgaacca cataattgcc gcgattcccc ctcgtaataa tccagggaat
     4381 agcgcgccgc ggacgccgta agaacctcgc aatatcatag caaaaggaac gccatatttg
     4441 ctgcctgccg cgccattcat taccatcgcc gccgcaataa ataatgcgct gataataatg
     4501 gccaacatga tattaaatgt tgatagcccc agtataaaaa aaccgccgac cataacgtaa
     4561 tttggcacgt tatgtacaga tcccatccat aaggtgaaat agttaaatgc tttccagttt
     4621 cgttgggttt ctgttttagg taataagtct tcgctataac cgcgttgctg atatagctct
     4681 ctttgatgtt ccataaatcc ctcttttcac gcatcggata acgttgttat gggtttagct
     4741 atgaggaaca aataaatata aaataaagaa atagtagata taattatttt taagctgaag
     4801 caatacgttg cgttgctttc tttttatata atgtgacagc agcaaagatc agcgttccgg
     4861 taaccactaa acatgctgaa atcacaaaac tgatctcctt cgaccccgtt acatccgaaa
     4921 taaatccggt caacgttggg gcgacaaccg ctgaactcat gccaaagaaa ttaaaaaggc
     4981 tgaaagctct tcccagactt tttgccgaag cctgttcaga tacaaaggag atcaggatcg
     5041 ggtctactgc cattttccct agcaagccgt atagcgtcag gctgaccatc agcatcgtgg
     5101 tattcgggga caaaaccgta aacgccaaca ttgccgccgc cacaatttcc agaccgagaa
     5161 taaccttaac tttactgtta cggaatttat ctgacagatg gctaaaaaat aacgcccccg
     5221 gtacgccaac caccgccacc agagctgatg ccagcccgat agctccgcca tcaaatcctc
     5281 tttcagtctg gagataagaa ggcagccagg tcactatcaa ataataaccg tagcaggtac
     5341 agaaatagag gaagtaaacg ctacacaata aaccagagaa taaaggcgcg cgtttctcat
     5401 cttccgtaac ggtttgggtt tgcttttccg cttgcgcaga gtcgcttttg gctttaccac
     5461 gaatgaccag cgtaaagacg cacagcataa ttactaatat cgcggccacg atatacagta
     5521 cattttgcca ggccatgctc atgtttttta ctaatacgct ggaaccgatt aagccaatcc
     5581 ccatccctat agccgacccg ctgttgataa tcgcgttggc taatgcccga cgggcctgcg
     5641 gcacgtttgc cgaagagagt gaataagccg aactaaagaa agaagcgcat cctccgcctg
     5701 ccattagcga ccctgtatag atcatggcca ggccattggc tttcgcgata cagagtgtac
     5761 caataataaa aagcgtaaat ccggccatca gcatgatttt ttgaccgaat ttatcgacca
     5821 atattccgca agggatttgc atactgcagt aagcaaaaaa gtaaaaactt gcaatggcgc
     5881 ctatttctgc attacttaca ttgtctaaag atgcctgaat ttctggataa attggcgtaa
     5941 gcacggtgcg atagatccaa atcgctaccc agcccagact cattacgaca acaatttgtt
     6001 tccagtaatc aatcccggat tttttagttt cactcatgtt cttcaccttt acagagtgtt
     6061 ccttgtgaac aggtatcgct gcagccgcag cgatacacat aattaggaca atttatgatt
     6121 ggccattaat tccagcgcct gtaccattgc cgaatgatca agctggctcc cgccatttgc
     6181 cgcacaggta ttgaataatt cctggcaggt cgccgtattc ggtaaattca gcgccagcgc
     6241 ttttgcgctt tgcaatgcaa gattaaggtc tttctgatga agcgcgattt tgaaaccagg
     6301 ctcgaacgtc cggttgatca tccgctcgcc gtgaacttcc agaatgcgtg aagaggcgaa
     6361 cccgcccatt aacgcctggc gcacgcgtac cggatcggcg cctgcttttg aagcaaacac
     6421 taaggcttca gaaaccgctt caatattcag cgcaacaata atttggttag ccaccttaca
     6481 ggtttgccca tccccattgc cgcccaccag ggtgatattt tttcccagga tgtcaaagag
     6541 cggtttaacg cggtcaaaga ctttctgctc gccgccgacc ataatcgaca gagtgccttc
     6601 acgcgccccg atttctcccc cggaaaccgg ggcatccagg taatcagcgt ccatttcatt
     6661 aacgcgctgg gcaaaacgtt tggttccgat aggagaaata gaactcatat cgacgatggt
     6721 ttttccctga agcgatgttt tggcgcaacc gtgttcgcca aataacacct cttcaacctg
     6781 cggcgtatcc ggcaccatta tgaagatgat gtctgcgaat tcagtcacct gacgtgcagt
     6841 ctcaacattt accgccccca gcgagagcag ttcgtccgcg actggaccaa tagtcgtaac
     6901 gtgtaattga tgaccggcgc gtgccaaatt gatagccatt ggcgagccca taattcccag
     6961 gccaataaat cccagtttca tatacaacct cttttattgc tttcggtgtt tccagattca
     7021 ggcaacacaa tccccttcca acacagtgga aaaaaaagcg ctgcccgaat tattctgcgt
     7081 tttaacggta ctgattaatc cacgataatc ccgcttccgc ggtagtcagt ggtttatatt
     7141 cacatccaac ccagccatca taatcagact gtttaatgac attaaaaata aagtcataat
     7201 tgatttcccc ggtccccggc tcgccgcgac gcgggttatc agcaatctgt aaatggccta
     7261 ttttatcggc ccatgccgtc atggtttgcg ttaattcccc ttccatgcgt tgcatgtgat
     7321 aaatatcata ctgaattttg atattatcgc tgccgatatc cttaattaat actaacgcct
     7381 gttgagtgcc ggtgagatgg aatcccggca tatcaaagtg attaataggt tcgataagta
     7441 ataaaatgtc ttctttcgcc agcatatttg ccgcatagcg caggttttcg accaacgtgt
     7501 cgtagatctc cgttgcggag aatcctgacg gcgttttacc caccagacaa tttattttct
     7561 tattgcctaa cgcgcgtgca tagcggattg cggccgctac gccatcgcga aactcttctt
     7621 cgcgcccagg aatacaggca attccacgtt cgccagccgc ccagtcgcca gccggtaaat
     7681 tatgtaacgt atgttccaga ttattatccc tgagcttacg ttttaacact tcgatgtcgt
     7741 catcgtaggg aaacatgaat tccacgccgc gaaatcccga ctgcgccgct ttatcaaagc
     7801 gttccaggaa atcatattcc gtaaacagca tagaaagatt ggcagagaaa cgtaacatcg
     7861 attacctccc ttactcatat ttcataaaac aggtttctgt tggcgcatct ttcgcactat
     7921 ccgcaacctc ttcaaactcg gttacgttat ccagttcgtc gcccatggaa atattggtta
     7981 cgcgttccag aatgacttcc accaccaccg gaacgcgata ttgcgccatc agcgctttag
     8041 cttgttcaaa tgcaggcgca atatcttccg gtttaaagac acgaattgct ttacagccta
     8101 acccttctgc cacttttaca tggtcaacgc catagccatt cacttcgctg gagttgatat
     8161 tttcaaaggc gagctgcacg caatagtcca tgtcaaatgc gcgttgcgac tggcgaatca
     8221 gaccaagata agcgttgtta accagcacat ggatatacgg aatgttaaac tgcgcgccga
     8281 cggctaactc ttcaatcagg aactggaagt cgaaatcgcc ggaaatcgcc accacattgc
     8341 gttgtggatc ggcagcacaa acccctaatg ccgccgggat tgtccagcca agaggccccg
     8401 cctggccgca gttgatccag tgtctgtctt taaacacatg cagcatctgc gctgccgcga
     8461 tttgcgacaa tccaatggtg gtgacatagc acacatcgcg accaaaggct ttgttcatct
     8521 cttcatagac gcgctgcggc ttcactggca cgttgtcaaa gtgggtttta cgcagcaaag
     8581 tccgtttacg ctgctggcat tcgtccaccc aggtcttccg gcatggcaaa cgccccgctt
     8641 tttgcatctc ctgcgcgaca tcgatcagca acgttagcgc cgctttggcg tcagaaacga
     8701 tgcccagatc cgggcacaac acgcggccaa tttgcgtcgg ttcaatatcg atatggatga
     8761 tttttcgacc ctgagtatat ttctcaacgg accccgtatg acggttggcg aaacggttac
     8821 cgatgccaaa aaccatatcg gatgccagca gagtggcgtt gccgtagcgg tgcgccgttt
     8881 gcaggccgac catccccgcc attaaggggt gatcgtccag ggtacagccc cagcccatca
     8941 gggtagggat caccggtacg ttgatcagtt cggcaaactg ctgcagcagt ggcgcggcgt
     9001 cggcgttaat aaccccgccg cccgcgacaa ttaccggacg ctcggactga atcagcatct
     9061 ccagcgcctt ttcaatctgt actcggctgg cggctggctt atataccggc agcggctcat
     9121 acatatccgg atcgaattcg atttccgcaa cctggacatc aaacggtaaa tcaaccagca
     9181 caggacctgg gcggcctgag cgcatcagat gaaaagcctg ctgtaatacg cgcggcacca
     9241 gcgccgcctc acgaaccgtc actgccatct tgctgactgg ttttgcaatc gcttcaatat
     9301 cgactgcctg gaaatcttcc ttgtgcagac gcgctcgcgg cgcctggccg gtaatgcata
     9361 aaatcgggat agagtcggca gaagcggaat agagcgcggt gatcatgtcg gttcccgccg
     9421 ggccggaagt gcccaggcag accccaatat tacctgccgc cgcacgtgtg tagccctcag
     9481 ccatatgcga agcgccttcc acatgacgcg ccagtatatg gcgaatgcct ccatgcttac
     9541 gcattgcaga atagaagggg ttgattgcag ccccaggaac gccgaatgct gtggtgatac
     9601 cttctttttc cagcacatac attgccgcat ccacggctct catttttgcc attttattgc
     9661 tacctctttt tattggaaaa agtttccaac ttttaaaaat tttaaaaaag tcccgctcca
     9721 gcgagcggga tgcggctcag gctacagggg gttttagccc aagcgccgta ctgatgtctt
     9781 tcgcggtatc ccgtaccagt tcaccctggc tgataaagcg atcttccgtc agccgggaag
     9841 ccggtcccga tattgagata gcggcgacca cgctgcccgc atcgtcatag atagcggagg
     9901 cgatacaatt cagcccgaca acatgttctt cctggtcaac ggtatagccc tgttcacgcg
     9961 cccgctccag atttttaagc aggataggta aatccaccaa agtggtcggc gtaaaccgcc
    10021 gcaaaccagt attgacaacg atccccacca gctcttcttc ggtgagcggg taaagcagcg
    10081 cttttccggc gccggaagca tgtaacggca gacgactccc taagggcgcg cacattctga
    10141 ccatcgattt gcactccttt tgaccgatta acaccgcttc attaccgttg cgaatcgcta
    10201 cgttgaccgt ctcgccagaa agcagcataa gtcggtgcat aaagggcccg gccaccgaga
    10261 ggacatcgcg attatgaata tacgcagagc ccacattaaa tacgcctaaa ccaatatgcc
    10321 accagccaag ctggctatcc tggtacacaa aatcagccgc ttgcagtacc tttaacaggc
    10381 gaaacgtcgt agaaagcggt aaatccaggc tgccggaaat atcgctaact gatgaactgc
    10441 cgccgcttct ttcgagatat tgcaatatcg ctatgcccct ctccagcgcc tgagcgcctt
    10501 tctgcgcagt cggctctgcc tgtcctggcc tgccgcgtcg tcttacttcc gtcatattta
    10561 cgttaactcc ggcccaaaat atgagcataa acaatgaaca atatgttcat cttatgcaag
    10621 aaggccaata gcgtcacgca aaacagagtt catgtgtcgg gatactttca acatcacagt
    10681 tatcgctgcc accgcgatcc accgtcagaa aatcggtaac cgtctgccac gcaaacagcg
    10741 ggtgatgcca tacattacgg tgataattga cgccctgccg tccattgcta ataaacgccc
    10801 gcagcgtgga gagatcgggt ttatcatcgc cgagcgcgac aataacgaca aaagcctcgc
    10861 cgttcatcgg cacaaacgcc tgcgtaccta aaggatgacg ttccagttca tgtaccacaa
    10921 taggcatcgc ggctggttgc gccctgttaa tactgatcag cgtgcgatcc tgctccagaa
    10981 cttcaacctt cgccaggtcg tgatatcgct caactaaccc gttgtttata tgaaaaagtc
    11041 acgttcctgc gtctcaataa catcgccata ggcgctgaac gtcttctgat ctaacggtaa
    11101 tacctcaagt ttcattattt ttcccttgta gctcgattcc gtttaaccgc ggtttggact
    11161 ctgtccggtt tcaataccat gcaatctaaa accttcggga tttaacatca acataaaact
    11221 tggaatattt ttccaaaagt agatttagac cacaaatcaa acatggctat tatgtaaaac
    11281 tacttaaaaa tcataggaaa acaattctgg ttttatcagg atcgtaagga ggcgtctgac
    11341 gatgtttgac ccggaaacac tgcgtacctt tatcagcgtt gccgaaacgg ggagtttctc
    11401 caaagcggcg gagcgcctgt gtaaaaccac ggcaactact agctaccgca tcaaactgct
    11461 ggaggaaaat accggcgtag ggctgttctt tcgcacaacg cgaagcgtct cgttgacggc
    11521 ggcgggctct caccttctct ctcaggcaaa agactggctt gcgtggctgg acagcatgcc
    11581 tgacgagcta cgccaggtta acgacggcgt agagcgtcag gtcaatattg tggtgaataa
    11641 cctgctctat agcccgcaag cggtcgccag tctcttatcg tggcttaatg cgcgttaccc
    11701 tttcacccag tttcactttt cccggcaaat ttatatgggc gtctgggatt cgctcctgta
    11761 tgaaggtttt tcgctggcga ttggcgtaac tggcaccgag ccgttggcta atacctttat
    11821 gctcgaccct ttaggttccg tacaatggcg ttttgtgatg tccgcggatc atcctttagc
    11881 tcacgtcagc gggcctctaa cagaagcgca gttgcgccgt ttcccggcaa ttaatatcga
    11941 agacagcgcg cgtacgctga ccaagcgggt agcctggcgc cttccggggc agaaggaaat
    12001 tatcgtgcct gatatggaaa ccaaaatcgc cgctcatctg gcaggcgtcg gtatcggttt
    12061 tgttccgcag ccgctttgtc aaacgctgat cgacaaaaac gaactggtga gctgtaccat
    12121 ccctacgatg cgtccgccct caccgttaag cctcgcctgg cataaatttg gcggaggcaa
    12181 agcggtagaa gacattgtga aattatttac ccaacgacaa cccgaaatag ccggtttttt
    12241 atccattttc aacacggtac gctgttaaaa atcaagccac tttgcgaatt ggcgcgtaaa
    12301 atagcgcaaa ggatgattta aggttacgtt ttacgttatg caagacagac aaaaagcaca
    12361 ggactatcgc gcactcctcc ttgccgatac gcctttaatt gatgtacgcg cgccgattga
    12421 gtttgaacag ggcgccatgc cgggcgctat caacctgcca ttgatgatgg
//
LOCUS       DAGWFR010000118        12287 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.120, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000118 DAGWFR010000000
VERSION     DAGWFR010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 12287)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12287)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12287
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.120"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..1868)
                     /gene="pflB"
                     /locus_tag="MOX77_003256"
     CDS             complement(<1..1868)
                     /gene="pflB"
                     /locus_tag="MOX77_003256"
                     /EC_number="2.3.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate C-acetyltransferase"
                     /protein_id="HCA3358706.1"
                     /translation="MKVNIDTSDMLYAEAWRDFKGTDWKEEINVCDFIQHNYTPYEGD
                     ESFLADATPATTALWEKVMAGIRIENATHAPVDFDTNIATTITAHDAGYIEKELEKIV
                     GLQTDKPLKRALHPFGGVNMIKSSFHAYGREMDADFEYTFTDLRKTHNQGVFDVYSPD
                     MLRCRKSSVLTGLPDGYGRGRIIGDYRRVALYGIRYLVRERELQFADLQSNLERGQNL
                     EATIRLREELAEHRRALLQMQEMAAKYGYDISRPARNAQEAVQWLYFAYLAAVKSQNG
                     GAMSLGRTASFLDIYIERDFNAGLLTEQQAQELIDHFIMKIRMVRFLRTPEFDSLFSG
                     DPIWATEVIGGMGLDGRTLVTKNSFRYLHTLHTMGPAPEPNLTILWSEALPVAFKKYA
                     AQVSIVTSSLQYENDDLMRTDFNSDDYAIACCVSPMVIGKQMQFFGARANLAKTLLYA
                     INGGVDEKLKIQVGPKTAPLTDEVLDYDAVMESLDHFMDWLAVQYISALNIIHYMHDK
                     YSYEASLMALHDRDVYRTMACGIAGLSVAADSLSAIRYAQVKPIRDENGLAIDFAIEG
                     EYPQYGNNDERVDSIACDLVKRFMQKISVLPTYRNAVPTQSILTITSNVVYGQKTG"
     gene            complement(1902..3110)
                     /gene="tdcD"
                     /locus_tag="MOX77_003257"
     CDS             complement(1902..3110)
                     /gene="tdcD"
                     /locus_tag="MOX77_003257"
                     /EC_number="2.7.2.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propionate kinase"
                     /protein_id="HCA3358707.1"
                     /translation="MNEFPVVLVINCGSSSIKFSVLDVATCDVLMAGIADGMNTENAF
                     LSINGDKPINLSHSNYEDALKAIAFELEKRDLTDSVALIGHRIAHDGELFTQSVIITD
                     EIIDNIRRVSPLAPLHNYANLSGIDAARRLFPAVRQVAVFDTSFHQTLAPEAYLYGLP
                     WEYFSSLGVRRYGFHGTSHRYVSRRAYELLDLDEKNSGLIVAHLGNGASICAVRNGQS
                     VDTSMGMTPLEGLMMGTRSGDVDFGAMAWIAKETGQTLSDLERVVNKESGLLGISGLS
                     SDLRVLEKAWHEGHERARLAIKTFVHRIARHIAGHAASLHRLDGIIFTGGIGENSVLI
                     RQLVIEHLGVLGLTLDVEMNKQPNSHGERIISVNPSQVICAVIPTNEEKMIALDAIHL
                     GNVKAPVEFA"
     gene            complement(3177..4507)
                     /gene="tdcC"
                     /locus_tag="MOX77_003258"
                     /pseudo
     CDS             complement(3177..4507)
                     /gene="tdcC"
                     /locus_tag="MOX77_003258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462157.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine transporter TdcC"
     gene            complement(4528..5517)
                     /gene="tdcB"
                     /locus_tag="MOX77_003259"
     CDS             complement(4528..5517)
                     /gene="tdcB"
                     /locus_tag="MOX77_003259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional threonine ammonia-lyase/L-serine
                     ammonia-lyase TdcB"
                     /protein_id="HCA3358708.1"
                     /translation="MHITYDLPVAIEDILEAKKRLAGKIYKTGMPRSNYFSERCKGEI
                     FLKFENMQRTGSFKIRGAFNKLSSLTEAEKRKGVVACSTGNHAQGVSLSCAMLGIDGK
                     VVMPKGAPKSKVAATCDYSAEVVLHGDNFNDTIAKVSEIVETEGRIFIPPYDDPKVIA
                     GQGTIGLEIMEDLYDVDNVIVPIGGGGLIAGIAIAIKSINPTIKVIGVQAENVHGMAA
                     SYYAGEITAHRTTGTLADGCDVSRPGNLTYEIVRELVDDIVLVSEDEIRNSMIALIQR
                     NKVITEGAGALACAALLSGKLDSHIQNRKTVSIISGGNIDLSRVSQITGLVDA"
     gene            complement(5615..6553)
                     /gene="tdcA"
                     /locus_tag="MOX77_003260"
     CDS             complement(5615..6553)
                     /gene="tdcA"
                     /locus_tag="MOX77_003260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator TdcA"
                     /protein_id="HCA3358709.1"
                     /translation="MNTLVLPKTQHLVVFQEVIRSGSIGSAAKSLGLTQPAVSKIISD
                     VEAYFGVELIVRKNTGVTLTEAGQVLLSWSESITREMKNMINEMNSMTCNTVVDVSFG
                     FPSLIGFTFMSDMIHKFKEVFPKAQVSMYEAQLSSFLPALRDGRLDFAIGTLSNEMQL
                     QDLHVEPLFESEFVLVASKSRTCTGTITLESLKDEQWALPQTNMGYYSELLTTLQRNG
                     ISIENIVKTDSVVTIYNLVLNADFLTVIPCDMTTPFGSNQFITIPIKDTLPVARYAAV
                     WSKNYRIKKAASVLVELAKQYSSYNGCRRRQLIEIE"
     gene            complement(7597..7972)
                     /gene="rnpB"
                     /locus_tag="MOX77_003261"
     ncRNA           complement(7597..7972)
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="MOX77_003261"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            complement(8005..9150)
                     /gene="garK"
                     /locus_tag="MOX77_003262"
     CDS             complement(8005..9150)
                     /gene="garK"
                     /locus_tag="MOX77_003262"
                     /EC_number="2.7.1.165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate 2-kinase"
                     /protein_id="HCA3358710.1"
                     /translation="MKIVIAPDSYKESLSAAEVAQAIEKGFREIFPDAQYVSVPVADG
                     GEGTVEAMIAATQGVERAAWVTGPLGEKVKACWGMSGDGKTAFIEMAAASGLALVPPE
                     KRNPLITTSRGTGELILQALESGASNIIIGIGGSATNDGGAGMMQALGAKLRDANGAD
                     IGYGGGSLHCLSNIDISELDPRLKLCAIRVACDVSNPLIGDNGASRIFGPQKGATEEN
                     IVELDRNLAHYADIIKKSLNVDVKAAPGAGAAGGMGAALMAFLGAELRSGIEIVTAAL
                     NLEEHIHDCTLVVTGEGRIDSQSIRGKVPIGVANVAKKYHKPVIGIAGSLTHDVGIVH
                     HYGIDAVFSVLTRIVTLEEAFRGAFDNIYRASRNVAAALAIGMRSAG"
     gene            complement(9248..10138)
                     /gene="garR"
                     /locus_tag="MOX77_003263"
     CDS             complement(9248..10138)
                     /gene="garR"
                     /locus_tag="MOX77_003263"
                     /EC_number="1.1.1.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxy-3-oxopropionate reductase"
                     /protein_id="HCA3358711.1"
                     /translation="MTMKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAA
                     GAETASTAKAIAEQCDAIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLA
                     SREISDALKAKGVEMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSVV
                     HTGDIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIRGGLAGSTVLD
                     AKAPMVMDRNFKPGFRIDLHIKDLANALDTSHGVGAQLPLTAAVMEMMQALRADGHGN
                     DDHSALACYYEKLAKVEVTR"
     gene            complement(10164..10934)
                     /gene="garL"
                     /locus_tag="MOX77_003264"
     CDS             complement(10164..10934)
                     /gene="garL"
                     /locus_tag="MOX77_003264"
                     /EC_number="4.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydro-3-deoxyglucarate aldolase"
                     /protein_id="HCA3358712.1"
                     /translation="MNNAIFPNKFKAALAAQQVQIGCWSALASPITTEVLGLAGFDWL
                     VLDGEHAPNDVTTLIPQLMALKGSASAPVVRVPTNEPVIIKRMLDIGFYNFLIPFVET
                     QEEAARAVASTRYPPEGIRGVSVSHRANMFGTVPDYFAQSNKNITIIVQIESQLGVDN
                     VDAIAATEGVDGIFVGPSDLAAALGHLGNASHPDVQQTIQHIFARAKAHGKPCGILAP
                     VEADARRYLEWGATFVAVGSDLGAFRASTQKLADTFKK"
     gene            11465..>12287
                     /locus_tag="MOX77_003265"
     CDS             11465..>12287
                     /locus_tag="MOX77_003265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UxaA family hydrolase"
                     /protein_id="HCA3358713.1"
                     /translation="MANIEIRQESPSAFYIKVHETDNVAIIVNDHGLKAGTRFPDGLE
                     LTEHIPQGHKVALTDIPAHGEIIRYGEVIGYAVRDIPRGSWIDESLVELPKAPPLNTL
                     PLATKVPEPLPPLEGYTFEGYRNADGSVGTKNLLGITTSVHCVAGVVDYVVKVIERDL
                     LPKYPNVDGVVGLNHLYGCGVAINAPAAVVPIRTIHNIALNPNFGGEVMVIGLGCEKL
                     QPERLLEGTEDVPAIAVENASIVRLQDEQHVGFKSMVDDILRVAERHLTKLNQRQR"
BASE COUNT         3092 a         3322 c         2862 g         3011 t
ORIGIN      
        1 ttgccggtct tctgcccgta cacgacgttc gaggtgatgg tcaaaatgga ctgcgtcggc
       61 accgcattgc gatacgtcgg caacacgcta attttttgca taaagcgttt caccaggtcg
      121 caggcgatgc tgtccacgcg ctcatcgttg ttgccgtact gcggatactc gccttcaata
      181 gcaaagtcga tggcaaggcc attttcgtcg cgaatcggct tcacctgagc gtacctgatg
      241 gcggataggg aatccgccgc caccgacagt ccggcgatgc cgcacgccat cgtccgatac
      301 acatcacggt cgtgcagcgc catcagcgaa gcttcatagc tgtacttatc gtgcatatag
      361 tgaatgatgt tcagcgcgct aatgtactgc accgccagcc agtccataaa atggtcgagg
      421 ctctccatta ctgcgtcata atccagcacc tcatccgtta acggcgcggt tttcggccca
      481 acctggattt tcagtttctc gtcaacgccg ccattgatag cgtacagcaa cgttttggca
      541 aggttggcgc gcgcgccgaa gaactgcatc tgcttaccga tgaccatcgg gctgacgcaa
      601 caagcgatgg cgtaatcgtc gctgttaaag tcggtacgca ttaaatcgtc gttttcatac
      661 tgcaaagatg aggtcacgat ggagacctgc gcagcatatt tcttgaatgc caccggcaac
      721 gcttctgacc acagtatggt caggttcggc tccggcgctg gccccatcgt gtgcagggta
      781 tgcagataac ggaaagagtt cttcgtcacc agcgtgcggc catcaagccc catcccgcca
      841 ataacttcgg tggcccagat cggatcgccg gaaaagagcg aatcaaattc cggcgtgcgc
      901 aggaagcgca ccatgcggat cttcatgatg aaatggtcga tcagctcctg cgcctgctgc
      961 tctgtcagaa gacccgcgtt gaaatcgcgc tcaatgtaga tatcaaggaa cgaggcggtt
     1021 cttcccagcg acattgcacc gccattttgc gattttaccg ccgccagata agcgaagtag
     1081 agccactgta ccgcttcctg cgcgttccgc gccgggcggg agatatcata gccgtatttc
     1141 gccgccatct cctgcatttg cagcagcgcg cgacggtgct ccgccaactc ctcacgcagg
     1201 cgaatcgtcg cctcaagatt ctgtccccgc tccagattcg actgcaggtc ggcgaattgc
     1261 agctcgcgtt cgcgcaccag ataacggatg ccatacagcg cgacgcggcg ataatcgcca
     1321 ataatgcgcc cgcgaccata accatccggc aaaccggtta atacgctgga tttacggcag
     1381 cgcagcatat ccggcgagta aacatcgaat acgccctgat tatgggtttt ccgcaggtcg
     1441 gtaaaggtat attcaaaatc ggcgtccatt tcccggccat aagcgtggaa tgaacttttg
     1501 atcatgttaa cgccgccaaa cggatgcaaa gcgcgtttaa gcggcttatc cgtttgtaaa
     1561 ccgacgattt tttccagctc tttttcaata taccccgcat cgtgcgcggt aatcgtcgtc
     1621 gcgatgttgg tatcgaaatc caccggcgca tgggtcgcgt tctcgatacg tattcccgcc
     1681 atcacctttt cccacaacgc tgtggtcgct ggcgtcgcgt cggcgagaaa agattcatcc
     1741 ccctcatagg gcgtatagtt atgctgaata aaatcacaga cattaatttc ttctttccag
     1801 tccgtacctt taaaatcacg ccatgcttcg gcatacagca tatcgctggt atcgatattt
     1861 accttcatga aaaataatct ctctacagaa cagccgttaa gttatgcaaa ttccactggt
     1921 gctttcacgt tgcctaaatg aatggcatca agggcaatca ttttctcttc attcgtggga
     1981 ataacagcgc aaataacctg agaagggtta acggaaataa tgcgctcgcc gtgagaattc
     2041 ggctgcttat tcatttcaac gtctaacgta agccccagta cgcccaaatg ttcaatgacc
     2101 aactggcgaa ttaatactga attttcacca ataccgccgg taaaaataat gccatccagc
     2161 cgatgtaacg atgccgcgtg tccggcaatg tgacgggcga tacggtggac aaacgttttt
     2221 atcgctaacc gggcgcgctc atgtccttcg tgccaggctt tttccaggac tctaaggtcg
     2281 gatgacaacc cggagatgcc gagcaaaccg gactctttat tcaccactcg ctccagatcg
     2341 ctcaacgtct gcccggtttc tttggctatc cacgccatcg cgccgaaatc aacgtcgccg
     2401 ctgcgagtgc ccatcatcag cccctcaagc ggcgtcatcc ccattgaggt gtccacgctc
     2461 tgaccattgc gtaccgcgca gatagacgcc ccattgccca gatgcgcgac aatcagaccc
     2521 gagttttttt catcgaggtc aagcagttca tacgcgcgcc gcgaaacata gcgatgcgac
     2581 gtaccgtgaa agccgtagcg acgcacaccc aggctggaaa aatattccca cggcaatccg
     2641 tataaatagg cttccggcgc cagcgtctgg tggaaactgg tatcaaatac cgccacctga
     2701 cgcacggccg ggaaaaggcg ccgcgccgcg tcaatgccgc ttaaattagc gtaattatgc
     2761 agcggcgcta aaggtgatac ccgacgaata ttatcgataa tctcatcggt aataatgacg
     2821 gactgcgtaa atagctctcc atcgtgcgcg atacggtgac caattaatgc cacgctatcc
     2881 gttaaatcac gtttttccag ctcaaaggca atggctttta acgcgtcctc ataattagag
     2941 tgcgagaggt ttatcggctt atcgccatta atagataaaa aggcgttttc agtattcatt
     3001 ccatctgcta ttcccgccat taaaacatca caggtagcga catccagtac agagaatttg
     3061 atagaagatg atccgcaatt aatgaccaga acgaccggaa attcattcat gtagtgcctc
     3121 cgtcgatgtc agcctgcgtc cacgccctgg ggcggaacgc aggctaaacg tgaggattag
     3181 aacaatttgt agacaatatt caggatggtc agcagaccaa tcagggtgac gaacacgtta
     3241 tccagacgac cacggtactt cgccagcgac ggcgctttac gaatggcgta catcggcagc
     3301 aggcataaca gtgaggcgat aatcggcgcg cccatcgctt caatcaggtc cagaatgttc
     3361 gggtttgcgt aagctacgac ccaggtagat cccataatga agatcatgct gatggtatta
     3421 agcttgccca tagagacttt ggttttatcg cctttataac cgaatttcag caccaggccg
     3481 ttcagccctt ccagcgtccc caggtagtgg ccgaagaaag atttgaaaat agcaaccagc
     3541 gcgatgatag acgcgccata ctccagcacc gttgcaaaag tggattttgt ccccgacaaa
     3601 gaggcgaaat ggttggccag gtaggaaagt accggaatgt tctgcgcttt cgcatccgcc
     3661 atgttctgcg gggagagcgt aaacagacag ctaaaggcga agaacatcac cacggcgacc
     3721 atcagcatat ggcgcgcgag atgatctgtg aacatttacg ctcggtaaat tcgcggccaa
     3781 actctttctc atactcttca cgcttagaca ccacgaagga agagacgatg ggcgaaaagt
     3841 taaaggagaa caccataata gagatgccca gccacaccgt aaccagtatg ccatcgtgcc
     3901 cggtcagcgc gatattactg agatcaacct gatcgataac cgccgagttc cagtaaggaa
     3961 tcagcgataa tgagattagc accagactgg cgataaacgg ccataccagg taactcatca
     4021 ccttaaccat cagatcttta ccaaaccaga tcacaaaggc catcagcagc agcaagaaca
     4081 gcgccacgaa accgcgattc aacgctggta tctgcaactg gttttcccaa aacgtcatga
     4141 acgtgttagt aatggtgacg ccataaatcc acagcagcgg acaaatcgca aagaagtaaa
     4201 ggaacgtgat aactaccccg cccgttttac caaagtgctc ttcgaccgtt tccgtaatat
     4261 tgccggacgg attagacccg gataaacaca gacgcgccag cgcccggtga caatagaacg
     4321 caatgggata agctaaaacc agcatcagca gaatggggat aagcccgcca aacccggcgc
     4381 ggatagggaa gaacagcacc ccggcgccga tggcggtacc aaataaaccc agcgtccacg
     4441 tcgtgtccga tttacgccat gacgactgtt ttgcctggct ggatacaatg ctatcagtag
     4501 tactcatatc ctatcctcac gaaaagatta agcgtcaact aaacccgtaa tttgtgatac
     4561 acgagaaaga tcgatattgc cgccagaaat aatactgacc gtttttctgt tctgaatatg
     4621 gctatctaat ttcccgctta atagtgcggc gcaggccagt gcgccagcgc cttcagtaat
     4681 aaccttattg cgctgaatta aagcgatcat gctgttacga atttcatctt cgctaaccag
     4741 aacaatgtca tcgactaatt cacgaacaat ttcataggtt aaattacccg ggcgggagac
     4801 atcacaacca tccgccaggg tgccggtcgt tcggtgcgcg gttatttcgc cagcgtaata
     4861 agacgccgcc ataccgtgaa cattttcggc ctgtacgccg ataactttaa tggtcgggtt
     4921 aatcgattta atcgcaatgg caatacctgc aattaaaccg ccgccgccaa taggcacgat
     4981 gacattatcg acatcgtaca gatcttccat aatttccaga ccaatagtac cctgcccggc
     5041 aatgactttt ggatcgtcgt aaggcggaat aaaaatgcgg ccttcggttt cgacaatttc
     5101 actcacctta gcaatggtgt cattgaagtt gtcaccgtgg agcaccactt ccgccgaata
     5161 atcacaggtg gccgccactt ttgactttgg cgcgcccttc ggcatcacga ctttgccgtc
     5221 aatacccagc attgcgcaag aaagagaaac gccctgtgca tgattacctg tggaacaggc
     5281 cacgacgcct ttacgttttt ccgcctccgt taacgagcta agtttgttaa aagcgccacg
     5341 aattttaaat gaacccgtac gctgcatatt ttcaaacttg agaaatattt cgcctttgca
     5401 acgttcacta aaatagttag agcgaggcat tcccgtttta tatatcttcc ccgccagtct
     5461 ttttttcgct tcgaggatat cttcaattgc aaccgggaga tcgtatgtaa tgtgcattat
     5521 aacctcttaa cctgggtatt aaaaataagt taccgttgcc cactgttcaa aagaaacagg
     5581 tggcgtcaat ttcgctaaat atgtttattc catatcattc aatttctatt aactgcctgc
     5641 gtctgcatcc attatatgat gaatattgct tagccaattc tactaatact gaagcggctt
     5701 ttttgatacg ataattttta gaccataccg ccgcataacg tgcgacgggt aatgtgtctt
     5761 tgattggtat cgtgataaat tgattagagc caaaaggcgt ggtcatatcg cagggaataa
     5821 cagttaagaa atcagcattg agaacaagat tatatattgt gacaacggaa tctgttttaa
     5881 caatgttttc gatgctgatg ccatttcgtt gtagagtggt gagtaattcg ctgtagtagc
     5941 ccatattcgt ttgcggcaac gcccactgtt cgtcctttaa cgattccagt gtgatggtgc
     6001 cggtgcatgt tcgggacttg ctggctacca ggacaaactc tgattcaaac agcggctcga
     6061 catgcagatc ctgtagctgc atttcattac tgagcgtacc gatagcaaag tccagccgcc
     6121 cgtcgcgcag ggccggcagg aatgaagaga gctgggcttc gtacatggat acctgcgctt
     6181 ttggaaatac ctctttgaac ttatgaatca tatcggacat gaaggtaaag ccaatcagcg
     6241 aaggaaaacc aaacgagacg tcgacaacgg tattgcacgt catactgttc atctcgttga
     6301 tcatgttttt catttcgcgg gtgatagatt cagaccagga aagcagtacc tgtcccgctt
     6361 cggtcaacgt aacgccggta tttttgcgta caattagctc aacgccaaaa taggcctcaa
     6421 catcgctaat gattttactg acggcgggtt gggttaaccc taacgatttt gcggcagaac
     6481 cgatagaacc acttctaatg acttcctgaa agaccaccaa atgctgtgtt ttagggagaa
     6541 caagagtatt catatctacc gctctgaaat aacattgtga acggcaggaa gtgtagcaaa
     6601 ttaaatctta aaggttatgt gcgaccactc acaaattaac ttaccgcaat ttttacatgg
     6661 tctttattaa ataaagaaaa cctattactt caatgagtta caaaaacaag acagtaactt
     6721 agcctgattt caatcaaaaa aaatggtcgg gataacgata tattatggcg ataaccagcc
     6781 tattttatct cctattttcg acatcccatg aagacgatat ttcaatcaat tacgggacat
     6841 tttatcgaca attccagcgt taaatttaaa acgtaatttc tcaaatttaa gtataaaccg
     6901 aaggtaaatg cgcttaaaaa ccgttacgcg tcacattttt ttaccttatt tgtttgtaaa
     6961 gaaacattta ataaaatttt aaccaaaata tttcatacat ttaattttca tttgcaacaa
     7021 ataatttaca ccgttttctt gctgtttttc aggatgtaat tttgtgaaag aaatcgattg
     7081 cttttcactt caactaaaaa gagcgcaatc catagcgttt tgtgtttctc atcacaaaaa
     7141 cgaataatat tatgtcacca cggctgtcaa ttaattgccg gatggtgaca ctggcgtctt
     7201 ctgcaacctc tatacccttc accggcctga taagcaaaaa cccgccgaag cggattttat
     7261 gaagaggtga aactgaccga taagccgctt tctttcgggt atagcgtcgt ggacagtcat
     7321 tcatcctgcc gccctgtaaa agcaaaaacc cgccagctta cactgacggg gtttatgaag
     7381 aggtgaaact gaccgataag ccgctttctt ttgggtatag tgttgtggac agtcattcat
     7441 cctgtcgccc tgtaaaagca aaaacccgcc gaagcgggtt ttatgaagaa gtgaaactga
     7501 ccgataagcc gctttctttt gggtatagcg tcgtggacag tcattcatcc tgccgccctg
     7561 taaaagcaaa aacccgccga agcgggtttt atgaagaagt gaaactgacc gataagccgg
     7621 gttctgtcgt ggacagtcat tcatctaggc cagcaatcgc tcactggctc aagcagccta
     7681 cccgggttca gtacgggccg taccttatga acccctattt ggccttgctc cgggtggagt
     7741 ttaccgtgcc acggactgtt accagccgcg cggtgcgctc ttaccgcacc ctttcaccct
     7801 tacctgatcc cacttgcgtg ggccatcggc ggtttgctct ctgttgcact ggtcgtgggt
     7861 ttcccccccc aggcgttacc tggcaccctg ccctatggag cccggacttt cctcccctcc
     7921 gcccgtctcc ccgaaaggac gacgacgaag cggcgactgt ctggtcagct tcggcgcgca
     7981 gtatagaggg ttcgcgcgac tttgtcaccc tgcgctgcgc attcctatcg ccagagcggc
     8041 agcaacattt ctggatgccc gataaatatt gtcaaaagcg ccccgaaaag cctcctccag
     8101 cgtcacgatg cgcgtgagta cgctaaagac agcgtcgatg ccataatgat gtactattcc
     8161 tacatcgtgc gtcaggctgc cggcaatgcc aatcactggc ttatgatatt ttttcgccac
     8221 attcgcgacg ccaatcggca ctttaccgcg aatgctttgg ctatcaatcc gcccttctcc
     8281 cgtcaccacc agcgtacagt cgtggatatg ctcctccagg ttcagtgccg ccgtgacaat
     8341 ttcgatcccg ctgcgtaatt ccgcaccgag aaaagccatt aacgccgccc ccataccgcc
     8401 tgccgcgcct gcgccgggcg ccgcctttac gtcgacattc agcgattttt ttatgatgtc
     8461 ggcataatga gcaagattcc tgtccagctc aacaatgttc tcttcggtcg cgcctttctg
     8521 cggcccaaaa attcgtgatg cgccattgtc gccgataaga ggattggaga catcgcaagc
     8581 gacacgaata gcgcagagtt ttaaacgggg atcgagctct gaaatatcaa tgttgcttag
     8641 acaatgaagg cttccgccac cgtaaccaat atccgcgccg tttgcatcgc gcagttttgc
     8701 gcctaacgcc tgcatcatcc ctgcgccgcc gtcatttgtc gcgctgccgc caatgcctat
     8761 aatgatattg cttgcgccgc tttccagcgc ctgcaatatc agctcccccg ttccccgcga
     8821 ggtagtaatc aaagggttgc gtttttctgg cggaaccagc gccagtccgc tggccgccgc
     8881 catttcaata aacgcggttt taccatcccc ggacattccc cagcaggctt tcactttttc
     8941 acccaacggc ccggtcaccc atgcggcgcg ttcaacgccc tgcgtcgcgg caatcatggc
     9001 ttcgaccgtt ccttcgccgc catcggcaac cggaacagag acatattgcg catcggggaa
     9061 aatttcccga aatccttttt ctatcgcctg cgctacctcg gcggcagaaa ggctttcttt
     9121 ataggagtcg ggggcaatta cgattttcat agtggtagcc tgttactgca caacgccgga
     9181 tggcgtttca cttatccagc ctgaaattca ggcccggatc gctacacgcc atccgggcac
     9241 aacgtcgtta gcgagtgact tccactttcg ccagtttttc gtagtagcac gccagcgcgc
     9301 tatggtcgtc attaccgtgt ccatccgcgc gtaacgcctg catcatttcc ataacggcgg
     9361 cggtcagcgg gagctgcgcg ccaacgccgt gggaggtatc cagcgcattc gccagatctt
     9421 taatgtgcag atcgatacgg aaacctggct taaagtttct gtccatgacc atcggcgctt
     9481 tcgcatccag taccgtgctg ccagccagac cgccacgaat cgcctgatag accaaatccg
     9541 ggttgacgcc cgctttagtc gccagcgtca gcgcttcaga catggcggcg atattcaacg
     9601 ccacgatcac ctggttagcc agttttgtga cgttgcctgc gccgatatcg ccggtatgca
     9661 ccacggaacc cgccatcgct ttcatcaggt cgtagtactt gtcgaaaatg gctttatcgc
     9721 cccccaccat caccgacagc gtgccatcaa tcgccttcgg ctcgccgccg ctgaccggcg
     9781 catccaacat ctcaacgccc ttcgccttca gcgcatcgct gatttcacgg cttgccagcg
     9841 gcgcgataga actcatatca atcaatacgg ttcccggctt cgcgccttcg atgataccgt
     9901 tctcgcccag cgcaacctct ttcacatgcg gagagttagg cagcatcgtg atgatggcgt
     9961 cacactgttc agcgatcgcc ttcgccgtag aggccgtttc cgcgcctgcg gcaatgacgt
    10021 cggcaatcgc ttcaggatta cgatcggaca ccaccagcga ataccctgct ttcagtaagt
    10081 ttttgctcat gggcttaccc atgatgccta agccaataaa gccaactttc atcgtcatag
    10141 cgttctctct ttccatacca ggattatttt ttaaaggtgt cggcaagctt ctgcgtgctg
    10201 gcgcggaatg cgcctaaatc gctgccaacg gcgacaaagg tcgcgcccca ttccagataa
    10261 cggcgggcat ccgcctctac cggcgccaga atgccgcacg gtttaccgtg cgctttagcg
    10321 cgggcgaaaa tatgttgaat cgtctgctgc acgtcagggt gagaagcatt gccgagatga
    10381 cccagcgcgg cggccaaatc gctagggccg acaaaaatgc catcaacgcc ttccgttgcg
    10441 gcgatggcat caacattgtc gacacccaac tggctttcga tttgaacaat aatggtgatg
    10501 tttttgttcg actgcgcaaa gtaatcaggc accgtgccga acatattcgc gcggtgagaa
    10561 acggagacgc cgcgaatgcc ttccggcggg taacgcgtcg aggcgacggc gcgagccgct
    10621 tcctcttgcg tttcaacaaa ggggatcagg aagttataaa acccaatatc cagcatccgt
    10681 ttgataatga ccggttcatt ggttggcaca cgtaccacag gcgcgctggc gctgcctttc
    10741 aatgccatta actgcggaat taaggtggtc acatcgttcg gcgcatgttc gccatccagc
    10801 accagccagt caaatcccgc cagaccgagt acttcggtgg tgattgggct tgccagtgca
    10861 gaccagcagc caatctgcac ctgttgcgcc gccagcgccg ctttaaactt attcgggaaa
    10921 atagcgttat tcatcgctta taccttcgct tatttcttta attctctaca tgtgatgccg
    10981 ccaccatgac ttatagcaac gacaataaaa atgcttattt gaaatcagaa tgggtctcca
    11041 cattctattt ctaatgtggt acacatcctg tagcacaata taccgttctg atatctttat
    11101 cgtcttttat tattatcatg atattttcaa ataactcgtc agatacactg aattcgccat
    11161 tcagtataaa cagcctatgt cggataatca ttgtgcaaac gctcattaaa aagggtttat
    11221 ttaacgctta tttttgagca tacgcccatg atactgggcg ctaatgcaca catttacgct
    11281 ttgcctgccc tacataaaaa atttcataat ttgcggtgat ctggatcacg ttcttatatc
    11341 tatactcctg tcattcttat ttcattatgc atgaacttta tttcttatat tgagatttaa
    11401 cgatttaacc ataaccaaaa tagataatcc tatttctatc atccaggctg gagaatgttg
    11461 aacaatggcc aatatcgaaa ttcgccagga atcgccatcg gcgttttata taaaagtaca
    11521 tgaaaccgat aatgtcgcaa ttattgttaa tgaccacggc cttaaagccg gaacacgttt
    11581 tccggatggc ctggaactga ctgaacatat tccgcaaggc cataaagtcg ctctgacgga
    11641 tatccccgct cacggcgaaa tcatccgtta tggcgaagtc atcggttatg cggtacgcga
    11701 catcccgcgc ggaagctgga tcgacgagtc gctggttgaa ctgccaaaag cgccgccgct
    11761 gaatacgcta ccgctggcga ccaaagtacc ggaaccgctg ccgccgctgg aaggctacac
    11821 gtttgagggc tatcgtaacg ccgatggcag cgtcggcacc aaaaatctgc ttggcattac
    11881 caccagcgtg cactgtgtgg cgggcgtggt cgattatgtg gtgaaagtga ttgagcgcga
    11941 tctcctgccc aaatacccga atgtcgatgg cgttgtaggg ctaaaccatc tgtacggctg
    12001 cggcgtggca atcaacgcgc cggcggcggt cgtgccgatt cgcacaattc ataatatcgc
    12061 gctcaacccc aattttggcg gcgaagtgat ggtgattggc ctcggttgcg aaaaactgca
    12121 gccggaacga ctgctggaag gcaccgagga tgtccccgcc atcgccgttg aaaacgccag
    12181 tattgtgcgt ttacaggacg agcagcatgt tggctttaaa tcaatggtcg acgatatttt
    12241 gcgggtcgcc gaacgccatc tgacgaaact gaaccagcgc cagcgcg
//
LOCUS       DAGWFR010000119        12040 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.121, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000119 DAGWFR010000000
VERSION     DAGWFR010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 12040)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12040)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12040
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.121"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..605
                     /locus_tag="MOX77_003266"
     CDS             <1..605
                     /locus_tag="MOX77_003266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="flotillin"
                     /protein_id="HCA3358714.1"
                     /translation="RAQQNVETTRQTAEADRAKQVALIAAAQDAETKAVELTVRAKAE
                     KEAAELQAAAIIELAEAARKKGLAEAEAQRALNDAINVLSDEQTSLKFKLALLQSLPA
                     VIEKSVEPMKSIDGIKIIQVDGLNRGATAGDVAAGGANGGNLAEQALSAALTYRTQAP
                     LIDSLLNEIGIAGGSLKALTTPLVSSATDEINREATIKEQ"
     gene            846..905
                     /locus_tag="MOX77_003267"
     CDS             846..905
                     /locus_tag="MOX77_003267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Ibs family toxin"
                     /protein_id="HCA3358715.1"
                     /translation="MMHQVIILIVLLLISFPAY"
     gene            complement(1065..2498)
                     /gene="hldE"
                     /locus_tag="MOX77_003268"
     CDS             complement(1065..2498)
                     /gene="hldE"
                     /locus_tag="MOX77_003268"
                     /EC_number="2.7.1.167"
                     /EC_number="2.7.7.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     D-glycero-beta-D-manno-heptose-7-phosphate
                     kinase/D-glycero-beta-D-manno-heptose 1-phosphate
                     adenylyltransferase HldE"
                     /protein_id="HCA3358716.1"
                     /translation="MKVNLPAFERAGVMVVGDVMLDRYWYGPTCRISPEAPVPVVKVN
                     TVEERPGGAANVAMNIASLGANARLVGLTGIDDAARALSKTLAEVNVKCDFVSVPTHP
                     TITKLRVLSRNQQLIRLDFEEGFEGVDPQPLHERINQALGSIGALVLSDYAKGALTSV
                     QTMISLARQAGVPVLIDPKGTDFERYRGATLLTPNLSEFEAVAGKCKSEDELVERGMK
                     LIADYDLSALLVTRSEQGMTLLQPNKAPLHMPTQAQEVYDVTGAGDTVIGVLAATLAA
                     GNTLEEACYFANAAAGVVVGKLGTSTVSPIELENAVRGRADTGFGVMTEEELRQAVAS
                     ARKRGEKVVMTNGVFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLKGESRPVNP
                     LEQRMIVLGALESVDWVVSFEEDTPQRLIAGILPDLLVKGGDYKPEEIAGSEEVWANG
                     GEVMVLNFEDGCSTTNIIKKIQTESEK"
     gene            complement(2546..5389)
                     /gene="glnE"
                     /locus_tag="MOX77_003269"
     CDS             complement(2546..5389)
                     /gene="glnE"
                     /locus_tag="MOX77_003269"
                     /EC_number="2.7.7.42"
                     /EC_number="2.7.7.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional [glutamate--ammonia
                     ligase]-adenylyl-L-tyrosine
                     phosphorylase/[glutamate--ammonia-ligase]
                     adenylyltransferase"
                     /protein_id="HCA3358717.1"
                     /translation="MTPLSSPLSQYWQTVVERLPEGFTETSLSAQAKSVLTFSDFALD
                     SVIAHPEWLAELESASPQADEWRHYAGWLQEALAGVCDDASLMRELRLFRRRIMVRIA
                     WAQTLSLVDDETILQQLSHLAETLIVGARDWLYAACCREWGTPCNPQGVPQPLLILGM
                     GKLGGGELNFSSDIDLIFAWPEHGETRGGRRELDNAQFFTRLGQRLIKALDQPTMDGF
                     VYRVDMRLRPFGDSGPLVLSFAALEDYYQEQGRDWERYAMVKARLMGDNDDAWSRELR
                     AMLRPFVFRRYIDFSVIQSLRNMKGMIAREVRRRGLKDNIKLGAGGIREIEFIVQVFQ
                     LIRGGREPSLQSRSLLPTLDAIAALHLLPENDVAQLRVAYLFLRRLENLLQSINDEQT
                     QTLPADDLNRARLAWGMKAENWPQLVGELTDHMANVRRVFNELIGDDEADTPQEEERS
                     EPWREVWQDALQEDDSTPVLAHLADEDRRQVLTLIADFRKELDKRPIGPRGRQVLDQL
                     MPHLLADVCSREDAAVTLSRITPLLAGIVTRTTYLELLSEFPGALKHLIMLCAASPMI
                     ASQLARYPLLLDELLDPGTLYQPTATDAYRDELRQYLLRVPEEDEEQQLEALRQFKQA
                     QLLRIAAADIAGTLPVMKVSDHLTWLAEAMIDAVVQQAWTQMVARYGQPAHLDERQGR
                     GFAVVGYGKLGGWELGYSSDLDLIFLHDCPMDVMTNGEREIDGRQFYLRLAQRIMHLF
                     STRTSSGILYEVDARLRPSGAAGMLVTSADAFADYQQHEAWTWEHQALVRARVVYGDP
                     QLTSQFDAVRRTIMTTARDGKTLQTEVREMREKMRAHLGNKHRDRFDIKADEGGITDI
                     EFIAQYLVLRYAHEKPKLTRWSDNVRILELLAQNGIMDEHEAQALTVAYTTLRDELHH
                     LALQELPGHVAQTCFSKERALVQASWRKWLVAV"
     gene            complement(5507..6808)
                     /locus_tag="MOX77_003270"
     CDS             complement(5507..6808)
                     /locus_tag="MOX77_003270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic triphosphatase"
                     /protein_id="HCA3358718.1"
                     /translation="MAQEIELKFIVNHDAVDALRNHLHTLGGEHHAPSQLLNIYFETP
                     DNWLRRHDMGLRIRGENGRYEMTMKIAGRVTGGLHQRPEYNVALSEPVLDLTQLPAEV
                     WPDGNLPDGLASSVQPLFSTDFYREKWCLDVDGSRIEIALDLGDVKAGEFAEPICELE
                     LELLRGDTRAVLKLAKQLLSQTGLRQGSLSKAARGYHLAQGNAPRENTPTAILRTAAK
                     ATVEQGLEASLDLALSQWQYHEELWLRGDESAKEHVLDAMGLVRHALMLFGGIVPRKA
                     SAHLRDLLTQAEATMTSAVSAVTAVYSTQTAMAKLALTEWLVTKAWQPFLDAKAQAKM
                     ADSFKRFADIHLSRHAAELKKVFGQPLGDKYRDQLPRLTRDIDSVLLLAGYYDAMVAQ
                     AWLENWQGLRHAIITGQRIEIEHFRNEAINQQPFWLHSGKR"
     gene            7050..7664
                     /locus_tag="MOX77_003271"
     CDS             7050..7664
                     /locus_tag="MOX77_003271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HCA3358719.1"
                     /translation="MPKLRLIGLTLLALSATAVSHAEETRYVSDELNTWVRSGPGDNY
                     RLVGTVNAGEEVTLLQSDANYGQIKDSSGRTAWIPLKELNTTPSLRTRVPDLENQVKT
                     LTDKLNNIDTTWNQRTADMQQKVAQSDSVINGLKEENQKLKNELIVAQKKVSAANLQL
                     DDKQRTIIMQWFMYGGGVLGIGLLLGLVLPHMIPSRKRKDRWMN"
     gene            7727..8968
                     /locus_tag="MOX77_003272"
     CDS             7727..8968
                     /locus_tag="MOX77_003272"
                     /EC_number="2.7.7.72"
                     /EC_number="3.1.3.-"
                     /EC_number="3.1.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional CCA addition/repair protein"
                     /protein_id="HCA3358720.1"
                     /translation="MKIYLVGGAVRDALLGLPVKDKDWVVVGATPQEMLDAGYQQVGR
                     DFPVFLHPQTHEEYALARTERKSGSGYTGFTCYAAPDVTLEADLQRRDLTINALARDD
                     DGQIIDPYHGRRDLEARLLRHVSPAFGEDPLRVLRVARFAARYAHLSFRIADETLTLM
                     REMTAAGELEHLTPERVWKETENALTTRNPQVYFQVLRDCGALRVLFPEIDALFGVPA
                     PAKWHPEIDTGVHTLMTLSMAAMLSPQLDVRFATLCHDVGKGLTPKNLWPRHHGHGPV
                     GVKLVEQLCQRLRVPNDLRDLAKLVAAYHDLIHTFPILQPKTIVKLFDAIDAWRKPQR
                     VEQIALTSEADVRGRTGFEASDYPQGRWLREAWQVAQAVPTKEVVEAGFKGIEIREEL
                     TKRRIAAVANWKEKRCPNPAS"
     gene            complement(9073..9894)
                     /gene="bacA"
                     /locus_tag="MOX77_003273"
     CDS             complement(9073..9894)
                     /gene="bacA"
                     /locus_tag="MOX77_003273"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HCA3358721.1"
                     /translation="MSDMHSLLIAAILGVVEGLTEFLPVSSTGHMIIVGHLLGFEGDT
                     AKTFEVVIQLGSILAVVVMFWRRLFGLIGIHFGRPLQREGESKGRLTLIHILLGMIPA
                     VVLGLVFHDTIKSLFNPINVMYALVVGGLLLIAAECLKPKEPRAPGLDDMTYRQAFMI
                     GCFQCLALWPGFSRSGATISGGMLMGVSRYAASEFSFLLAVPMMMGATVLDLYKSWSF
                     LTAADIPMFAVGFVTAFVVALIAIKTFLQLIKRISFIPFAIYRFVVAAAVYVVFF"
     gene            complement(9992..10351)
                     /gene="folB"
                     /locus_tag="MOX77_003274"
     CDS             complement(9992..10351)
                     /gene="folB"
                     /locus_tag="MOX77_003274"
                     /EC_number="4.1.2.25"
                     /EC_number="5.1.99.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708868.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional dihydroneopterin
                     aldolase/7,8-dihydroneopterin epimerase"
                     /protein_id="HCA3358722.1"
                     /translation="MDIVFIEQLSVITTIGVYDWEQTIEQKLVFDIEMAWDNRKSAKS
                     DDVADCLSYADIADTVINHVEGGRFALVERVAEEVADLLLSRFNSPWVRIKLSKPSAV
                     ARAANVGVIIERGNNLK"
     gene            10458..11069
                     /gene="plsY"
                     /locus_tag="MOX77_003275"
     CDS             10458..11069
                     /gene="plsY"
                     /locus_tag="MOX77_003275"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HCA3358723.1"
                     /translation="MSAIAPGMILFAYLCGSISSAILVCRIAGLPDPRESGSGNPGAT
                     NVLRIGGKGAAVAVLIFDILKGMLPVWGAYALGVTPFWLGLIAIAACLGHIWPVFFGF
                     KGGKGVATAFGAIAPIGWDLTGVMAGTWLLTVLLSGYSSLGAIVSALIAPFYVWWFKP
                     QFTFPVSMLSCLILLRHHDNIQRLWRRQETKIWTKLKKKRQKD"
     gene            11068..11196
                     /locus_tag="MOX77_003276"
                     /pseudo
     CDS             11068..11196
                     /locus_tag="MOX77_003276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311971.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate hydratase"
     gene            11198..11278
                     /locus_tag="MOX77_003277"
                     /pseudo
     CDS             11198..11278
                     /locus_tag="MOX77_003277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311973.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:sulfate symporter"
     gene            complement(11319..>12040)
                     /gene="tsaD"
                     /locus_tag="MOX77_003278"
     CDS             complement(11319..>12040)
                     /gene="tsaD"
                     /locus_tag="MOX77_003278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001264383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HCA3358724.1"
                     /translation="AFAWNVPAIPVHHMEGHLLAPMLEDNPPDFPFVALLVSGGHTQL
                     ISVTGIGQYELLGESIDDAAGEAFDKTAKLLGLDYPGGPMLSKMASQGTAGRFVFPRP
                     MTDRPGLDFSFSGLKTFAANTIRSNGDDEQTRADIARAFEDAVVDTLMIKCKRALEST
                     GFKRLVMAGGVSANRTLRAKLAEMMQKRRGEVFYARPEFCTDNGAMIAYAGMVRFKAG
                     VTADLGVTVRPRWPLAELPAA"
BASE COUNT         2772 a         3564 c         3117 g         2587 t
ORIGIN      
        1 ttcgcgccca gcaaaacgta gaaaccaccc gccagaccgc cgaagcggat cgcgccaagc
       61 aggtcgctct gatcgccgcg gcgcaggatg cggaaaccaa agcggtcgaa ctgaccgttc
      121 gggcaaaagc agagaaagaa gcggcagaat tgcaagccgc cgccatcatc gaactggcgg
      181 aagcagcgcg taaaaaaggt ctggcggaag ccgaagcgca acgggcgctg aatgacgcta
      241 tcaacgtact atctgacgaa caaaccagcc tcaaatttaa actagcgctc ttacaatcgt
      301 tgcctgctgt tattgagaag tctgttgaac cgatgaaatc catcgacggc attaagatta
      361 ttcaggtcga tggcctcaat cgcggcgcga cggcgggcga cgtcgccgct ggcggcgcta
      421 acgggggaaa cctggcggaa caagcgttat ctgccgcgct cacctatcgt acccaggcgc
      481 cgctgatcga ttcgctgtta aacgagattg gcatcgccgg cggctcgcta aaggcgctga
      541 ccacgccgtt ggtttcatcg gcaacggatg agattaatcg cgaagcaacg ataaaagagc
      601 aataacctcc ccgccatatc tcctgtccct ggccataagg ccggggattt ttttatcttt
      661 tttccacctt gtctgtacaa agcgttatga ccagcaggcc attttgcgtg ggcgatccag
      721 taacgcaaaa tcggcgggag aaagcccttg cgccagacag gccactcacc aacaatcgcg
      781 atgtcagcaa ggggctgaaa cgggaaagcc cctcccgagg aaggggcttt aataaggaaa
      841 gggttatgat gcaccaggtc atcatactga ttgttctgtt actgataagt ttcccagctt
      901 actaacagcc aatcagaggg gggagagatc ccctctcacc cttattcctt tactttaggt
      961 cgaaaaaaaa gcagcgtcaa ccgcgagata cgcgtcgaaa caaaatgtcc gacgcacctt
     1021 caaaatcagc gcccgcagcg tctgtaacgc ctgatgacgc ggttttactt ctcgctctcg
     1081 gtctggatct ttttgatgat attggtcgtg gaacaaccat cttcgaagtt cagcaccatg
     1141 acttcgccgc cgttggccca gacctcttcg ctgcccgcga tctcttccgg cttatagtcg
     1201 ccgcctttta ccagcagatc cggcagaata ccggcaatca gtcgttgcgg cgtatcctct
     1261 tcaaaagaga caacccagtc gaccgactcc agcgcgccca gcacgatcat acgctgttcg
     1321 agcggattaa ccggacggct ttcgcctttc agacgtttag tcgaggcgtc actattgacc
     1381 gcaacaatca ggcggtcgcc cagtttgcgc gcgttcgcca gataagagac gtggcccgcg
     1441 tgcagaatat cgaaaacgcc gttggtcatg accactttct cgccacgctt acgcgcgctg
     1501 gcgacggcct gtctcaactc ctcttcggtc atgacgccga agccggtatc cgcgcgtccg
     1561 cgcactgcgt tttccagctc aataggggaa accgttgacg tcccgagttt acctaccact
     1621 acgcccgccg ccgcattggc gaaataacac gcctcctcca gggtatttcc cgccgccagc
     1681 gtcgccgcca gcacgccgat caccgtatcg cccgcaccgg taacatcata aacttcctgc
     1741 gcctgcgtcg gcatatgtag cggcgcttta ttcggttgca gcagcgtcat tccctgttcg
     1801 gaacgcgtga ccaacagcgc ggaaaggtcg taatcggcaa tgagcttcat gccgcgttca
     1861 accagttcgt cttcgctttt acatttcccc gcaaccgcct cgaattcaga aaggtttggc
     1921 gtcagcagcg tggcgccgcg gtaacgttca aaatccgttc ctttcggatc gatgagcacc
     1981 ggcacgcccg cctggcgcgc tagggaaatc atagtctgca cgctggtcag agcgcctttg
     2041 gcataatcgg acaataccag cgcgccgatc gatcccagcg cctggttgat acgctcatgc
     2101 aacggctgcg ggtccacgcc ctcaaagcct tcttcaaaat caagacgaat gagctgctga
     2161 ttacgtgata gtacgcgcag tttggtaatc gtcggatgcg tcggcacaga aacgaagtcg
     2221 cacttcacat tgacctccgc cagcgttttg ctcagcgcgc gcgcggcgtc atcaataccc
     2281 gtcaggccga ccagacgggc gttcgctccc agagacgcaa tgttcatcgc cacgttcgcc
     2341 gcgccgcccg gacgttcctc aacggtattt accttaacca cgggcaccgg cgcttccggt
     2401 gaaatacggc aagtggggcc ataccaatag cgatccagca ttacatcacc cacaaccatg
     2461 acgcctgcac gttcaaacgc tggcagattt actttcattc ctgtctcctg agagattcaa
     2521 aatttgcgcg cgataatagc ataattcaaa cggctaccag ccacttccgc cagcttgcct
     2581 gcaccagcgc gcgctctttg ctaaaacatg tctgcgccac atgaccggga agctcctgca
     2641 acgccaggtg gtgcagttca tcacgcagtg tggtgtaggc taccgtcagc gcctgcgctt
     2701 cgtgttcatc cataatgccg ttttgcgcca gaagctccag gatgcgcacg ttatcagacc
     2761 agcgcgttaa tttaggtttt tcatgagcgt agcgcagtac cagatattgc gcgataaact
     2821 caatatccgt aataccgcct tcatcagctt taatatcaaa acgatcgcga tgcttattgc
     2881 cgagatgcgc ccgcattttc tcgcgcattt cacgcacttc agtctgcaat gtcttaccgt
     2941 cacgcgccgt cgtcatgata gtgcggcgca ccgcatcaaa ctgtgaggta agctgcgggt
     3001 cgccatatac cacgcgagcg cgtaccaacg cctgatgttc ccaggtccag gcttcatgct
     3061 gctgataatc ggcaaacgcg tccgctgaag tcaccagcat tccagccgcg ccagaggggc
     3121 gtagacgcgc atccacctca tacaaaatgc cggaggaggt gcgcgtactg aacagatgca
     3181 taatgcgctg cgccaggcgc agataaaact gccgcccgtc gatttcgcgt tcgccgttgg
     3241 tcatgacgtc catcggacag tcatgcagga agatgagatc cagatcggaa ctgtagccca
     3301 gctcccatcc gcccaacttg ccataaccga cgaccgcaaa cccccgcccc tggcgttcgt
     3361 ccagatgcgc tggctgacca taacgcgcaa ccatttgcgt ccacgcctgc tgcaccacag
     3421 catcaatcat cgcctccgcc agccatgtga ggtgatcgct cactttcatc accggcagcg
     3481 taccggcaat atccgccgcc gcaatccgca aaagctgtgc ctgtttaaac tggcgtaatg
     3541 cctccagttg ttgttcttcg tcctcttccg gcacgcgcag caaatactgg cgtaattcgt
     3601 cgcggtaagc gtcggtagcc gtcggctgat aaagcgtgcc ggggtcgagc agttcatcaa
     3661 gcaacaacgg ataacgcgcc agttggctcg ctatcattgg cgaagcggcg cagagcataa
     3721 tcaggtgttt cagcgcgccg ggaaattcgc tcagcagctc cagataggtg gtgcgagtga
     3781 caatccccgc cagcaacggc gttatccgcg atagcgtaac agcggcgtct tcgcgggaac
     3841 agacgtcagc aagcaggtgc ggcatcagtt ggtccagcac ctgccgcccg cgcgggccga
     3901 tagggcgttt atccagttcc ttacggaagt cagcgataag ggtcagaacc tgtcgccgat
     3961 cctcatcggc taaatgcgcc agcactggcg tcgaatcatc ctcctgtagc gcatcctgcc
     4021 atacttcacg ccacggctct gaacgttctt cctcctgcgg ggtatcggct tcatcatcgc
     4081 caattaattc gttgaatacg cggcgtacat tagccatatg atccgtcagt tcgccaacaa
     4141 gctgcggcca gttctccgcc ttcattcccc aggccagccg cgcccgattc agatcgtcgg
     4201 caggcaacgt ttgcgtctgt tcgtcattga tgctttgcag cagattctcc agacgacgta
     4261 gaaaaagata ggccacgcgt agttgcgcca cgtcattctc aggcagcaaa tgcagcgcag
     4321 cgatagcatc cagcgtcggc agtaacgaac gcgactgtag cgacggctcg cgtccgccgc
     4381 ggatcagctg gaatacctgc acgataaact caatttcccg aataccgccc gcgccaagtt
     4441 taatgttgtc tttcaaaccg cggcgtcgca cttcgcgggc gatcatccct ttcatattac
     4501 gtagcgactg gatgacgctg aaatcgatat agcggcggaa aacgaaaggc cgcagcatgg
     4561 cgcgtaattc acgagaccag gcgtcgtcgt tatcgcccat tagccgcgct ttcaccatgg
     4621 cgtagcgttc ccagtcgcgt ccttgctcct gatagtaatc ctccagcgcg gcaaaactca
     4681 gtaccagcgg gccgctgtcg ccaaacggtc gcaggcgcat gtctacccga tagacaaaac
     4741 catccattgt gggctgatcc agcgctttga tcagccgctg cccgagacgc gtaaaaaact
     4801 gggcgttatc gagttcacga cgcccgcccc gggtctcgcc atgttccggc caggcgaaaa
     4861 tcagatcgat atcagacgaa aaattcagtt cgccgccgcc cagcttgccc atgcctaaaa
     4921 tcagcagcgg ctgcggaacg ccctgcgggt tacagggggt tccccattcg cggcaacagg
     4981 cggcatacag ccagtcgcgc gccccgacga tgagcgtctc cgccagatgg ctcaactgtt
     5041 gtaaaatagt ctcatcgtcc accagcgaca gcgtctgtgc ccaggcgatg cgtaccatga
     5101 tgcgacgacg aaaaagcctc agctcacgca tcagcgaggc gtcgtcacag acacctgcca
     5161 acgcctcctg taaccagcca gcgtaatgtc gccattcatc agcctgcggc gatgcggatt
     5221 ccagttcggc aagccactcc ggatgcgcta tcacgctatc cagcgcaaaa tcgctaaatg
     5281 taagcactga cttcgcctgc gcgctaagcg atgtctcagt aaatccttct ggtaggcgct
     5341 caacaacggt ctgccagtac tgcgataagg gtgaagagag cggcgtcatt taggggatat
     5401 cctttaaata atgccggatg gcggcgtttc gcctgatccg gcctacaagt ccgcataccg
     5461 taagcctgat aagcgcagcg tcatcaggcg ctttctacgg ttctgattat cgttttccgc
     5521 tgtgcaacca gaacggctgc tggttgatgg cctcattacg gaaatgttca atttcaatac
     5581 gttgcccggt aataatggcg tgacgcaatc cctgccagtt ttccagccat gcctgcgcga
     5641 ccatcgcatc ataatacccg gccagcagta aaacgctgtc gatatcgcga gtcaaacgcg
     5701 gcaactggtc gcgatactta tcacccagcg gttgtccaaa aacttttttt aattcagcag
     5761 catgacgaga aagatgaatg tcggcgaaac gcttaaaaga atcggccatt ttggcctgcg
     5821 ccttcgcgtc cagaaatggc tgccaggctt tcgtcaccag ccattccgtc aatgccagtt
     5881 tcgccatcgc cgtttgcgta ctataaacgg ctgtgacggc ggacaccgcg gatgtcatcg
     5941 tcgcttccgc ctgggtaagt agatcacgta agtgagcgct cgctttacgt ggaacaatgc
     6001 caccaaaaag cattaaggca tggcgcacta atcccatagc atccagcaca tgttctttcg
     6061 ccgactcgtc gccgcgcagc cagagctctt catggtactg ccactgtgac aacgccagat
     6121 ccagcgaggc ctccagccct tgctctaccg tagctttcgc ggcagtccgc agaattgccg
     6181 ttggtgtatt ctctcgcggc gcattcccct gcgccaggtg ataacctcgc gccgccttac
     6241 tcagactgcc ctgacgcaaa ccggtttgcg acagcagttg cttcgccagt tttaacacgg
     6301 cgcgcgtatc gccgcgaagc aactcaagct ccagctcaca aattggttcg gcaaactcgc
     6361 ccgcttttac gtcgccgaga tcgagcgcaa tttcaatcct gctgccgtca acgtccagac
     6421 accatttttc ccggtaaaaa tcggtactga acagcggctg tacgcttgat gccaggccgt
     6481 cgggcaggtt gccatccggc cagacctccg ccggaagttg cgtcagatcc agcacgggtt
     6541 cgcttagcgc aacattgtat tcgggtcgct ggtgcagccc gcccgttacc cggccggcaa
     6601 ttttcatggt catttcatag cgcccatttt caccacgaat acgcagcccc atatcatggc
     6661 ggcgtagcca gttatcaggc gtttcgaaat agatattcag caactggctg ggcgcatgat
     6721 gctcgccgcc gagcgtatga agatgatttc gcagcgcatc tacggcgtcg tgattgacga
     6781 taaactttaa ttcgatttcc tgagccatgg ccttgtactt atgggttatg tcacatctgg
     6841 gaagattctt ggcgaactta cccgcattat ttttgtcagt agatagtatt ttgcgccaaa
     6901 ttgccatgca acgagcaatt tgacgggcgt aaaagtttga cgtagcggca aaggcgacac
     6961 agatgattcc gattgatgtc gactgctttg cgtagcgaca ctgatgccgt tactatcgtt
     7021 ccactttctc tgacaataac gacagcctga tgccaaaatt acgcctgatt ggactaactt
     7081 tacttgcgct tagcgccacc gccgtctctc atgctgaaga gacgcgttac gtttctgatg
     7141 aactgaatac ctgggtccgc agcggtccgg gagataatta tcgccttgtg ggtaccgtca
     7201 acgccggcga ggaagtcacg ctcttacaga gcgatgccaa ctatggtcaa attaaagaca
     7261 gttctggtcg tactgcctgg ataccgttaa aagaactgaa taccacgcca agcctgcgta
     7321 cccgcgtgcc ggatctggaa aatcaggtca aaacgttaac cgataaactc aacaatattg
     7381 ataccacgtg gaatcagcgc accgccgaca tgcagcagaa agtggcgcaa agcgacagcg
     7441 tcatcaacgg gctaaaagaa gagaaccaga agctgaaaaa cgagctgatt gtcgcgcaga
     7501 aaaaagttag cgccgcgaat ctgcaactgg atgacaaaca gcgcaccatt attatgcagt
     7561 ggtttatgta tggcggcggc gtattgggta ttggcttgct gttagggctg gtgctgccgc
     7621 atatgatccc aagccgtaaa cgcaaagacc gctggatgaa ctaaatcgcc ttctctgcgg
     7681 cactgtctta tcattagagg atgatcgttt ttaaaaggaa agtggcgtga agatttatct
     7741 ggtcggtggt gcggttcggg atgcgttgtt agggctaccg gttaaagata aagattgggt
     7801 cgttgtcggc gccacgccgc aggagatgct tgatgcgggc taccagcagg taggccgtga
     7861 ttttcctgtg tttctccacc cgcaaactca cgaagaatac gcgctggcgc gtaccgagcg
     7921 taaatccggt tccggctaca cgggtttcac ctgctatgcc gcgccggacg ttaccctgga
     7981 agccgacctc cagcgtcgcg atctgaccat taatgctctg gcgcgcgacg atgacggaca
     8041 gattatcgac ccttaccacg ggcgccggga tctggaggcg cgtctactgc gccatgtctc
     8101 tccggcgttt ggcgaagatc ccttgcgcgt attgcgcgtg gcgcgttttg ccgcccgtta
     8161 cgctcatctt agtttccgta tcgccgatga aacactgacg ctaatgcgcg aaatgaccgc
     8221 ggcaggcgag ctggaacatc tgacgccgga acgggtatgg aaagagacgg aaaatgcgct
     8281 taccacccgc aatccgcagg tttacttcca ggtattgcgc gactgcggcg ccctgcgcgt
     8341 cctgtttccg gaaatcgacg ccctgtttgg cgtacccgcg ccggcaaagt ggcatccgga
     8401 aattgatacc ggagttcata cgttgatgac gctgtcgatg gccgccatgc tcagtccgca
     8461 gcttgatgtc cgtttcgcca cgctttgtca tgatgtgggc aaaggcttaa cgccgaaaaa
     8521 cctctggccg cgccatcatg gccacggccc ggtgggcgtg aaactggtcg aacagttatg
     8581 ccagcgtttg cgcgtcccca atgacctgcg tgatttagct aaactggtcg ccgcgtacca
     8641 cgatctgatt cacacctttc cgatactcca gccgaaaacg atcgttaagc tgtttgacgc
     8701 cattgatgca tggcgtaaac cgcagcgcgt cgagcagatt gcgctgacca gcgaggccga
     8761 tgtccgtgga cgtaccggct ttgaagcgtc ggattacccg caggggcgct ggctgcgcga
     8821 agcctggcag gtggcccaag cggtaccaac gaaagaggtg gtggaggccg gatttaaggg
     8881 cattgagatt cgcgaggagc tgacgaagcg acgaattgca gcggtcgcca actggaaaga
     8941 gaagcgctgc ccgaaccccg ccagctaaac gccatccggc acgataaatt gcctgatggc
     9001 gctgcgctta tcagaccgac aaaactgtta ggccggacaa ggcggtacgc cgccatccgg
     9061 cacggtcaat catcagaaga agacaacgta aacggcagcc gccaccacaa agcggtaaat
     9121 cgcaaacgga ataaacgaga tacgcttaat cagttgcagg aaggtcttga tggcgatcag
     9181 cgccaccaca aacgccgtca caaagcccac cgcgaacatt ggaatatccg ctgcggtcag
     9241 gaatgaccaa cttttgtaga gatccagaac cgttgcgccc atcatcatcg gcacagccag
     9301 taagaacgag aactcggagg cggcgtaacg gctgacgccc atcagcatcc caccggaaat
     9361 ggtcgctccg gaacgcgaga agcccggcca cagcgccaga cactggaaac agccaatcat
     9421 aaacgcctga cgatacgtca tatcatccag ccccggcgcg cgcggttctt tcggcttcag
     9481 gcactcggcg gcaatcagca acagaccgcc taccaccagc gcatacatca cgttaatcgg
     9541 gttaaatagc gacttgatcg tgtcatgaaa gactaacccc agcaccaccg ccggaatcat
     9601 gcccagcagg atgtgaatca acgttaatcg acctttactt tcaccttcac gctgtagcgg
     9661 gcggccaaag tgaataccga tgagaccaaa caaccgccgc cagaacatca ccacgaccgc
     9721 cagaatagat ccaagttgaa tcaccacttc gaatgtcttg gccgtatcgc cttcaaaccc
     9781 cagcagatga cccacaataa tcatatggcc cgtgctggat accggcaaaa actccgtcaa
     9841 tccttcgacc acacccaaaa ttgccgctat cagcagcgag tgcatatcgc tcatcaataa
     9901 acccctaaaa tgaaaaacac tgcaaaaatg gatctcgcgt taagacccca tatataaccg
     9961 tttggtttaa aaaatataaa attatttatt tttatttcag attattgcca cgctcaataa
    10021 ttacccctac gttcgccgcg cgcgcgacgg cgctaggctt gctcagtttg atgcgaaccc
    10081 acggagaatt gaatcggcta agcagtagat ccgccacctc ttccgccaca cgctcgacca
    10141 gagcaaaacg cccgccttca acatgattta tcaccgtgtc ggcgatatcc gcgtaactta
    10201 gacaatctgc gacatcatcg cttttcgccg acttgcggtt atcccatgcc atttcgatat
    10261 cgaacaccag tttttgctcg atagtctgtt cccagtcgta aacaccgata gtggtgatta
    10321 ccgaaagttg ctctataaat acaatatcca tcacgacctg cctgcttttt ggctaacccg
    10381 gataccactt ccggcgaaat gtgcgtatta tccacagaaa tagtaaataa aacgacactt
    10441 tcaatacgga acagcttatg agtgcaatcg cgcctggaat gatcctcttc gcgtacctct
    10501 gcggctcaat ttccagtgcc attctggttt gccgcatcgc cgggctgccc gatccgcgag
    10561 aaagcggctc cggcaacccg ggcgcgacga acgtattacg aatcggtggc aagggagcgg
    10621 ctgtcgcggt acttattttt gacatcctta aaggcatgtt gcccgtctgg ggcgcgtatg
    10681 cgttaggcgt tacccctttc tggctggggc ttatcgctat cgccgcctgt ctgggacata
    10741 tctggccggt cttttttggc tttaaaggcg ggaaaggcgt agcaaccgcg tttggcgcca
    10801 ttgcgcccat cggctgggat ttaaccggcg tcatggcagg cacctggctg ctgacggtcc
    10861 tgttaagcgg ttattcatcg ttaggggcga ttgtcagcgc cttgattgcg ccgttttacg
    10921 tctggtggtt taaaccgcag ttcactttcc cggtgtcgat gctgtcatgt ctcattttgc
    10981 tgcgccatca tgacaacatc cagcgtctgt ggcgtcgcca ggagacgaaa atctggacga
    11041 agctgaaaaa gaaacgccag aaagattgag ctggaactgc gtctggaaga gggcctcaac
    11101 cgtctgggga tcggcccaca agggttgacc ggcaatagct cggtgatagg cgtacatatc
    11161 gaatccgccg cgcgtcaccc ttccaccatt ggcgtggtta ggcgcgattt tcggcctgat
    11221 tttcctggtg ctgctgatcg tctccaggct gttgtggatg cccatcgttt tgctgtaaat
    11281 ccgttggggc ggcatgatgt cgcccccttt ttccgctttt acgccgccgg cagctcggcc
    11341 agcggccagc gcggacgtac cgttacgcca agatccgccg taacgcccgc cttaaaccgc
    11401 accattccgg cataggcgat catcgccccg ttgtcggtac aaaattccgg gcgcgcatag
    11461 aacacttcgc cgcggcgttt ttgcatcatt tcggcaagct tcgcacgcag cgtgcggtta
    11521 gcgctgacgc cgcccgccat gacaagacgc ttaaaaccgg tgctttccag cgcgcgcttg
    11581 cacttgatca tcagcgtatc cacgaccgca tcttcaaaag cgcgcgcgat atcagcgcga
    11641 gtttgttcgt cgtcgccatt actacgaatg gtgttagcgg caaaggtttt cagaccggaa
    11701 aaactaaaat ccagccccgg gcgatcggtc atcgggcgcg gaaagacaaa acgccccgcc
    11761 gtcccctgcg acgccatttt cgacagcatc gggccgccag gataatccag ccccaacaat
    11821 ttggcggttt tatcaaacgc ttcaccggcg gcatcgtcaa tcgactctcc cagcagttcg
    11881 tactgaccga ttccggtcac gctaatgagc tgcgtatgtc cgccggagac cagcagcgcc
    11941 acaaacggga aatccggagg gttatcttcc agcattggcg ccagcagatg accttccata
    12001 tggtgtacag gaatggctgg cacattccag gcaaatgcca
//
LOCUS       DAGWFR010000120        12014 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.122, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000120 DAGWFR010000000
VERSION     DAGWFR010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 12014)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12014)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12014
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.122"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(39..2030)
                     /gene="tkt"
                     /locus_tag="MOX77_003279"
     CDS             complement(39..2030)
                     /gene="tkt"
                     /locus_tag="MOX77_003279"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HCA3358725.1"
                     /translation="MSSRKELANAIRALSMDAVQKAKSGHPGAPMGMADIAEVLWRDF
                     LNHNPTNPSWADRDRFVLSNGHGSMLIYSLLHLTGYDLPMSELQNFRQLHSKTPGHPE
                     VGYTAGVETTTGPLGQGIANAVGMAIAEKTLAAQFNRPGHDIVDHFTYVFMGDGCMME
                     GISHEVCSLAGTLKLGKLIAFYDDNGISIDGHVEGWFTDDTAKRFEAYGWHVIRGIDG
                     HDADAIKRATEEARAVTDKPSLLMCKTIIGFGSPNKQGTHDSHGAPLGDAEIALTREQ
                     LGWKYAPFEIPSEIYAQWDAKEAGQAKESAWNEKFAAYEKAFPQEAAEFTRRMKGDMP
                     ADFNAKANEFIAKLQANPSKIASRKASQNAIEAFGPLLPEFLGGSADLAPSNLTLWSG
                     SKAINEDAAGNYIHYGVREFGMTAIANGIALHGGFLPYTSTFLMFVEYARNAVRMAAL
                     MKQRQVMVYTHDSIGLGEDGPTHQPVEQVASLRVTPNMSTWRPCDQVESAVAWKYGVE
                     RQDGPTALILSRQNLAQQERTEEQLANIARGGYVLKDCAGQPQIIFIATGSEVELAVA
                     AYEKLTAEGVKARVVSMPSTDAFDKQDAAYRESVLPKAVSARVAIEAGIADYWFKYVG
                     LNGAIVGMTTFGESAPAELLFEEFGFTVDNVIAKAKALL"
     gene            2306..3064
                     /locus_tag="MOX77_003280"
     CDS             2306..3064
                     /locus_tag="MOX77_003280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HCA3358726.1"
                     /translation="MKIRALLLALGMATVLTGCQNMDSNGLLSSGAEAFQAYTLSDAQ
                     VKALSDQSCQELDSKAKIAPASSEYTKRLAKIAAALGDNINGQPVNYKVYETKDVNAF
                     AMANGCIRVYSGLMDMMTDNEVEAVIGHEMGHVALGHVKKGMQVALGTNAVRVAAASA
                     GGVVGSLSQSQLGDLGEKLVNSQFSQRQESEADDYSYDLLRKRGISPAGLATSFEKLA
                     KLEAGRQSSMFDDHPASAARAQHVRDRMSADGIK"
     gene            complement(3165..4085)
                     /gene="speB"
                     /locus_tag="MOX77_003281"
     CDS             complement(3165..4085)
                     /gene="speB"
                     /locus_tag="MOX77_003281"
                     /EC_number="3.5.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatinase"
                     /protein_id="HCA3358727.1"
                     /translation="MSTLGHQYDNSLVSNAFGFLRLPMNFQPYDSDADWVITGVPFDM
                     ATSGRAGGRHGPAAIRQVSTNLAWEHHRFPWNFDMRERLNVVDCGDLVYAFGDAREMS
                     EKLQAHAEKLLSAGKRMLSFGGDHFVTLPLLRAHAKHFGKMALVHFDAHTDTYANGCE
                     FDHGTMFYTAPKEGLIDPHHSVQIGIRTEFDKDNGFTVLDACQVNDRGVDDILAQVKQ
                     IVGDMPVYLTFDIDCLDPAFAPGTGTPVIGGLTSDRAIKLVRGLKDLNIVGMDVVEVA
                     PAYDQSEITALAAATLALEMLYIQAAKKGE"
     gene            complement(4313..6289)
                     /gene="speA"
                     /locus_tag="MOX77_003282"
     CDS             complement(4313..6289)
                     /gene="speA"
                     /locus_tag="MOX77_003282"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HCA3358728.1"
                     /translation="MSDDMSMGSPSSAGEQGVLRSMQEVAMSSQEASKMLRTYNIAWW
                     GNNYYDVNELGHISVCPDPDVPEARVDLAKLVKAREAQGQRLPALFCFPQILQHRLRS
                     INAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLGLEAGSKAELMAVLA
                     HAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIVLEEAERLNVVPR
                     LGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLRDAGRLDSLQLLHFHLGSQ
                     MANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDCSVNYGLNE
                     YANNIIWAIGDACEEHGLPHPTVITESGRAVTAHHTVLVSNIIGVERNEYTDPTAPAE
                     DAPRALQNLWETWQEMHKPGTRRSLREWLHDSQMDLHDIHIGYSSGAFSLQERAWAEQ
                     LYLSMCHEVQKQLDPQNRAHRPIIDELQERMADKMYVNFSLFQSMPDAWGIDQLFPVL
                     PLEGLDQVPERRAVLLDITCDSDGAIDHYIDGDGIATTMPMPEYDPENPPMLGFFMVG
                     AYQEILGNMHNLFGDTEAVDVFVFPDGSVEVELSDEGDTVADMLQYVQLDPKTLLTHF
                     RDQVKQTDLDDALQQQFLEEFEAGLYGYTYLEDE"
     gene            complement(6298..6429)
                     /gene="yqgB"
                     /locus_tag="MOX77_003283"
     CDS             complement(6298..6429)
                     /gene="yqgB"
                     /locus_tag="MOX77_003283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid stress response protein YqgB"
                     /protein_id="HCA3358729.1"
                     /translation="MKKKPVAQAEHQRYLLENPLVYGLLSRLRIAIVVNCFTLANKN"
     gene            6563..6727
                     /locus_tag="MOX77_003284"
     CDS             6563..6727
                     /locus_tag="MOX77_003284"
                     /inference="COORDINATES: protein motif:HMM:NF037550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358730.1"
                     /translation="MGITSAGMQSRDADCGRHARTRTMRQIQQNTTVHYLVSPPRPPR
                     KTNPQAKATF"
     gene            complement(6724..7023)
                     /locus_tag="MOX77_003285"
     CDS             complement(6724..7023)
                     /locus_tag="MOX77_003285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358731.1"
                     /translation="MTEDSTMSLKVTNTGSLSVNQYGWINIWTAILGHFFAQFPAFFE
                     GRRNVGQNQAVNVSDNADIMRIYALLFFCVLGIKRDARLIQKHTTFSSCRHFQPG"
     gene            7079..8233
                     /gene="metK"
                     /locus_tag="MOX77_003286"
     CDS             7079..8233
                     /gene="metK"
                     /locus_tag="MOX77_003286"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HCA3358732.1"
                     /translation="MAKHLFTSESVSEGHPDKIADQISDAVLDAILQQDPKARVACET
                     YVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPD
                     INQGVDRADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPW
                     LRPDAKSQVTFQYDDGKIVGIDAVVLSTQHAEDIDQKSLQEAVMEEIIKPILPSEWLN
                     TSTKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAA
                     YAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPAEQLILLVREFF
                     DLRPYGLIQMLDLLHPIYKETAAYGHFGRENFPWEKTDKAQLLRDAAGLK"
     gene            8726..10120
                     /gene="galP"
                     /locus_tag="MOX77_003287"
     CDS             8726..10120
                     /gene="galP"
                     /locus_tag="MOX77_003287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/proton symporter"
                     /protein_id="HCA3358733.1"
                     /translation="MPDNKKQGRSNKAMTFFVCFLAALAGLLFGLDIGVIAGALPFIT
                     DEFQITAHTQEWVVSSMMFGAAVGAVGSGWLSFKLGRKKSLMIGAILFVAGSLFSAAA
                     PNVEVLIISRVLLGLAVGVASYTAPLYLSEIAPEKIRGSMISMYQLMITIGILGAYLS
                     DTAFSYSGAWRWMLGVIIIPAILLLIGVFFLPDSPRWFAAKRRFHDAERVLLRLRDTS
                     AEAKRELDEIRESLQVKQSGWALFKENSNFRRAVFLGILLQVMQQFTGMNVIMYYAPK
                     IFELAGYTNTTEQMWGTVIVGLTNVLATFIAIGLVDRWGRKPTLTLGFLVMAIGMGIL
                     GTMMHIGIHSPSAQYFAIAMLLMFIIGFAMSAGPLIWVLCSEIQPLKGRDFGITCSTA
                     TNWIANMIVGATFLTMLNNLGNANTFWVYAGLNVLFILLTLWLVPETKHVSLEHIERN
                     LMKGRKLREIGAHD"
     gene            10199..10696
                     /locus_tag="MOX77_003288"
     CDS             10199..10696
                     /locus_tag="MOX77_003288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SprT family zinc-dependent metalloprotease"
                     /protein_id="HCA3358734.1"
                     /translation="MKTPRLPIAIQQAVMRRLRENLAQANLKLDRHYPEPKLVYTQRG
                     TSAGTAWLESYEIRLNPVLLLENIDTFIAEVVPHELAHLLVWKHFGRKAPHGKEWKWM
                     MESVLGVPARRTHQFALQSVRRNTFPYHCQCQQHQLTVRRHNRVVRGEAVYRCVHCGE
                     PLVAG"
     gene            10792..11499
                     /gene="endA"
                     /locus_tag="MOX77_003289"
     CDS             10792..11499
                     /gene="endA"
                     /locus_tag="MOX77_003289"
                     /EC_number="3.1.21.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease I"
                     /protein_id="HCA3358735.1"
                     /translation="MYRNFSFAAALLAAAFSGQALADGINNFSQAKAASVKVNADAPG
                     SFYCGCQIRWQGKKGVVDLESCGYKVRKNENRARRIEWEHVVPAWQFGHQRQCWQDGG
                     RKNCAKDPVYCKMESDMHNLQPAIGEVNGDRGNFMYSQWNGGEGQYGQCAMKVDFKAK
                     LAEPPARARGAIARTYFYMRDQYQLKLSRQQTQLFNVWDKQYPVTAWECERDARIAKV
                     QGNHNPYVQRACQARKS"
     gene            11576..>12014
                     /locus_tag="MOX77_003290"
     CDS             11576..>12014
                     /locus_tag="MOX77_003290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013319572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HCA3358736.1"
                     /translation="MRIPRIYHPELLTSGTQISLCEDAANHIGRVLRMGAGQALQLFD
                     GSNQVFDAEIISASKKSVEVQVMKGEIDDRESPLHIHLGQVMSRGEKMEFTIQKSIEL
                     GVSLITPLFSERCGVKLDNERLNKKRQQWQKIAIAACEQCGRNR"
BASE COUNT         2793 a         3326 c         3186 g         2709 t
ORIGIN      
        1 gggtcgccga agcgacccgt tttatgccgt attaaggatt acagcagcgc tttcgctttg
       61 gcgatcacgt tgtccaccgt gaagccaaac tcttcaaaca gcagctctgc cggggcggat
      121 tcaccgaagg tggtcatccc gacaatagcg ccgttcaggc cgacgtattt gaaccagtag
      181 tcagcgatac ccgcttcaat cgccacacgc gcagagaccg ctttcggcag cacggattca
      241 cggtaggccg catcctgctt gtcgaacgcg tcggtggacg gcatggaaac cacgcgcgcc
      301 ttcacgcctt cggcagtcag tttttcgtag gcggcaaccg ccagctcaac ctcagaaccg
      361 gtcgcaatga agataatctg cggctggccc gcacaatctt tcagtacgta accaccgcgg
      421 gcgatattcg ccagttgctc ttcagtacgc tcctgctgcg ccaggttctg acgggacaga
      481 atcagcgcgg ttgggccatc ctgacgctct acgccatatt tccacgccac cgcggattcc
      541 acctggtcgc acggacgcca tgtggacatg ttcggcgtta cgcgcaggct tgccacctgc
      601 tcgaccggct ggtgcgtcgg gccatcttcg cccagaccga tggagtcgtg ggtatagacc
      661 atcacctgac gctgtttcat caacgctgcc atacgcactg cgttacgggc atattcgacg
      721 aacatcagga aggtggaggt gtacggcagg aaaccgccgt gcagggcgat accgttggcg
      781 atagcggtca taccgaattc gcgcacaccg taatgaatgt agttacctgc ggcatcttcg
      841 ttaatcgctt tcgaaccgga ccacagggtc aggttagacg gtgccaggtc agcggagccg
      901 ccgaggaatt ccggcaacag cggaccgaag gcttcgatgg cattctggga cgctttacgg
      961 ctggcgattt tggatggatt cgcctgcagt ttagcgatga actcattcgc tttcgcattg
     1021 aagtcagccg gcatgtcgcc tttcatacga cgagtgaatt cagcagcttc ctgcgggaag
     1081 gctttctcat aagccgcgaa tttctcattc catgcagact ctttcgcctg gccggcttct
     1141 ttcgcatccc actgggcgta gatttcagac gggatttcga acggcgcgta tttccagccc
     1201 aactgttcgc gggtcagcgc gatttccgcg tcgcccagcg gcgcgccgtg ggaatcgtgg
     1261 gtaccctgtt tgttcggcga accgaagccg atgatggttt tgcacatcag cagggacggt
     1321 ttgtcagtca cggcgcgagc ttcttccgtg gcacgtttaa tggcgtcggc atcgtgaccg
     1381 tcaatgccac ggataacgtg ccagccgtag gcttcaaaac gtttcgcggt gtcatcggtg
     1441 aaccagcctt caacatgacc atcgatagag ataccgttgt catcatagaa cgcgatcagt
     1501 ttgcccagtt tcagagtacc agccagagag cacacttcgt gagaaatgcc ttccatcatg
     1561 cagccgtcgc ccataaagac gtaggtgaag tggtcaacga tgtcgtggcc aggacggtta
     1621 aactgcgccg ccagagtttt ctcggcaatc gccatcccga cggcgttggc aataccctgc
     1681 cccagcgggc cggtagtggt ttcaacgcca gcggtgtagc ccacttccgg gtgaccaggg
     1741 gtttttgaat gtagctgacg gaaattctgc agttcggaca tcggcaggtc ataaccggtg
     1801 aggtgcagca ggctgtaaat cagcattgag ccgtggccat tggacagcac gaagcggtcg
     1861 cggtcggccc aagacgggtt ggtcgggttg tggttcagga aatcacgcca caggacttcg
     1921 gcaatgtcag ccatacccat cggggcaccc gggtgaccgg atttggcttt ctgtactgcg
     1981 tccatgctca gcgcacgaat agcattggca agctctttac gtgaggacat tttgactcca
     2041 gatcggatgt tgaaaggcca tgcccgtaac gacttgacga cagcgcgttt tgggctacgc
     2101 cggaaaattt gccaacaatt taccccaagc cgcgcgtcat gtacatggaa catcctttta
     2161 ccgcttcaga aatctccgga tcgtgctcgc atgttgcgca attagctaac ttgcctgcca
     2221 cgcttttctt tatacttaac ccaggcgcta attcatctgc aacgggcgca tttcaaaata
     2281 atattaattc gtatggaaga gaaaaatgaa aattcgcgct ttactgcttg ctttgggcat
     2341 ggcgacggtg ctgaccggtt gccagaatat ggactctaat ggactgcttt cttcgggcgc
     2401 tgaagctttt caggcctata cgttaagcga tgcgcaggta aaagcgttga gcgatcaatc
     2461 ctgtcaagag ctcgacagca aagcgaaaat cgcgccggcg agcagcgaat acactaaacg
     2521 actggcaaaa attgccgccg cgctggggga taacattaac ggccagccgg tgaactataa
     2581 agtttacgag acgaaagacg tcaacgcgtt tgccatggcg aacggttgta tccgcgtcta
     2641 cagcggactg atggatatga tgaccgacaa cgaagttgaa gccgtgatcg gtcatgaaat
     2701 gggccatgtc gctctgggtc atgtaaagaa agggatgcag gtcgcgctgg gcactaacgc
     2761 cgtgcgcgtt gcggcggcat cggcaggagg cgttgtcggc agcctgtcgc aatcacagct
     2821 tggcgatctt ggcgaaaaac tggtgaactc gcagttctct cagcgtcagg agtccgaagc
     2881 ggatgattat tcttacgatc tgttgcgcaa acgcggtatc agtccggcag gactcgccac
     2941 cagctttgag aaactggcaa aactggaagc gggtcgtcaa agctcaatgt tcgacgatca
     3001 cccggcgtcc gccgcacgcg cacagcatgt gcgcgatcgt atgagcgcgg acgggatcaa
     3061 ataatccccg aacagtgccg gatggcggcg tgaacgcctt atccggccta cacaggcccg
     3121 gtaagcgtag gccggataag cgcagtgcca tccggcaaaa caacttactc gcccttcttc
     3181 gccgcctgga tatagagcat ttctaatgcc agcgtcgcgg ccgccagagc ggtgatctcc
     3241 gactgatcgt aagccggcgc gacttccact acatccatac cgacaatgtt cagatctttc
     3301 agaccacgta ccagcttaat ggcgcgatcg gaggtcaaac caccgatcac cggcgtaccg
     3361 gtgccaggcg caaacgccgg gtccagacag tcgatatcaa aggtcagata gaccggcata
     3421 tcgccgacga tctgtttcac ctgagcgaga atatcatcca cgccgcgatc gttgacctgg
     3481 caggcatcca gcacggtaaa gccattgtct ttgtcaaact cagtgcgaat accgatctgt
     3541 accgaatgat gcggatcgat caggccttct ttcggcgcgg tgtagaacat cgtgccgtga
     3601 tcgaattcgc agccgttagc gtaggtatcg gtatgcgcgt caaaatgtac cagcgccatt
     3661 ttgccaaaat gtttcgcgtg ggcgcgcagc agcggcagcg tgacgaagtg gtcgccgccg
     3721 aaagagagca tacgcttgcc tgcagacagc agtttttcag cgtgcgcctg taatttttcg
     3781 ctcatttcac gggcatcgcc aaacgcatac accagatcgc cgcagtccac gacgttcagg
     3841 cgctcgcgca tgtcaaaatt ccacgggaaa cggtgatgtt cccaggcgag gttggtcgac
     3901 acctgacgga tcgccgccgg gccatgacgg ccgccagcgc gaccggacgt tgccatatca
     3961 aacggtacgc cagtgatcac ccagtcggca tcgctgtcat acggctggaa gttcattggc
     4021 agacgtaaaa aaccaaacgc attagaaacc agtgagttat cgtactgatg acctaaagtg
     4081 ctcatgtcct gacctctttt agagtcgttg cattaaaaca gatgaaaaaa atcccctccg
     4141 cgtcgttaaa cccgacgagg aagggattga tttgtaaatc gctattgcag cgaattatcg
     4201 ccgttaattc atacgggttc aagtgagtat agcattctgc cgggtggcgg ctttacctta
     4261 tccagcctgc attcgtaggc ccggtaagcg cagcgccgcc gggcatcaac ggctactcat
     4321 cttcaagata agtataaccg tacagtcccg cttcaaattc ctcaaggaac tgctgctgca
     4381 acgcatcgtc cagatccgtc tgttttacct ggtcgcggaa atgcgttaat agcgttttcg
     4441 gatccagttg cacatattgc agcatatccg caacggtatc gccttcgtcc gacaactcaa
     4501 cctcgacact accatccggg aagacaaaca cgtcaaccgc ttcagtatcg ccaaacaggt
     4561 tgtgcatgtt accgaggatc tcctgatagg cgccgaccat aaagaagccg agcatcggcg
     4621 gattctctgg atcgtattcc ggcatcggca tcgtcgtggc gataccgtcg ccatcgatat
     4681 agtggtcgat agcgccatcg gaatcacagg taatatccag cagcacggca cgacgttccg
     4741 gtacctgatc taacccttcc agcggcagca ccggaaagag ctgatcgatt ccccacgcgt
     4801 ccggcatcga ctggaacagc gagaagttga cgtacatttt gtccgccatc cgctcttgca
     4861 gttcgtcgat aatcgggcga tgcgcacggt tttgcgggtc cagttgcttc tgcacttcat
     4921 ggcacatgct gagataaagt tgctccgccc aggcgcgctc ctgcaaacta aacgcgccgg
     4981 aagagtagcc gatatgaata tcgtgcagat ccatttggct atcatgcagc cattcacgca
     5041 gcgagcggcg ggtgccaggc ttatgcatct cctgccaggt ttcccacaga ttttgcagcg
     5101 cgcgcggcgc atcttcagca ggggcggtcg gatccgtgta ttcgttacgc tccacgccga
     5161 taatgttaga gaccagtacc gtatggtgcg cagtgacggc gcgcccagac tcggtaatca
     5221 ccgtcggatg cggtaaacca tgctcttcgc aggcatcgcc aatcgcccag atgatgttat
     5281 tggcatattc gttcaggcca tagttcaccg aacagtcgga ctgcgagcgg gtaccttcat
     5341 aatccacgcc cagaccgccg cccacgtcga agcactggat attaacgccc agcttatgca
     5401 gctcaacata gaaacgcgcg gactcgcgca cgccggtcgc gatatcgcga atgttcgcca
     5461 tctgcgatcc caggtggaag tgcaacagtt gcagactgtc cagacgccca gcgtcacgca
     5521 gggtctccac cagttgcagc acctgcgtcg ccgccaggcc gaattttgat ttttcgccgc
     5581 cggaggattg ccacttaccg gacccctgag aggccagacg cgcacgcacg cccaggcgag
     5641 gaaccacgtt caggcgctcg gcctcttcca gcacaatcgc gatttcagac atcttttcga
     5701 tgaccagata aaccttatgg cccatcttct cgccaatcag cgccagccga atatattcac
     5761 ggtctttata accattacag acgatcacgc tacgggtcat gccggcatgc gccagcaccg
     5821 ccatcaattc cgctttcgac cccgcttcca gccccaacgg ttcaccggaa tggataaggg
     5881 actcgatcac gcggcgatgc tgattgacct taatcggata aacgaggaag tagtcgccgt
     5941 tataaccgta agattcacgc gcacgcttaa acgccgcgtt aattgaacgc aaacggtgtt
     6001 gcaggatctg cgggaagcag aacagcgccg gcagacgctg accttgcgct tcgcgcgctt
     6061 tcaccagttt ggcaagatcg acacgcgctt ccggtacgtc gggatcgggg catacgctaa
     6121 tatggcccag ctcgttgacg tcgtagtagt tattgcccca ccaggcaata ttgtaagtgc
     6181 gcagcatctt gctggcttcc tgggagctca ttgcaacctc ctgcatggag cgtagtacac
     6241 cctgttcgcc tgctgacgaa ggcgaaccca tagacatgtc gtcagacata gcgaacctca
     6301 atttttatta gcaagtgtaa aacagttgac tactatcgca atccgaagac gcgataacaa
     6361 cccatagaca agcggatttt ccagcagata gcgctgatgc tccgcctgcg cgaccggttt
     6421 ctttttcata tcattgtaaa cacgtaaccg aactcacaga taacggttcg gcgaaaccac
     6481 gagaaaactc ttgcgttaac aagagcgccc ttgttcagtc ttcagcgcca ttgccggctc
     6541 tggaatcctg agaagcgccg agatgggtat aacatcggca ggtatgcaaa gcagagatgc
     6601 agattgcggg agacatgcgc gcaccagaac gatgcgacag attcagcaga atacaacggt
     6661 tcattatctc gtatcacctc cacggccgcc tcgtaagacg aacccacaag ccaaagcaac
     6721 gttttaaccc ggctggaagt ggcgacacga agaaaacgtc gtgtgctttt gtatgagccg
     6781 cgcgtcgcgt tttataccca gaacgcagaa aaaaagcaaa gcataaatgc gcataatgtc
     6841 agcattatca gaaacgttta ccgcctgatt ttgaccgaca ttgcgacggc cttcaaaaaa
     6901 agctggaaat tgggcgaaga agtgacctaa aatagccgtc cagatgttaa tccatccata
     6961 ctgattaaca ctcagactgc cagtgttagt aaccttcaga ctcatggtag aatcttctgt
     7021 catgactatt ccgcacaaca gtttgagcta actaaattct ccttaggtga aattaaatat
     7081 ggcaaaacac ctttttacgt ctgagtccgt atcagaaggg catcctgaca aaatcgcaga
     7141 ccaaatctct gatgccgtgt tggacgctat cctgcaacag gatccgaaag cacgcgtcgc
     7201 ctgtgaaacc tacgttaaaa ccggcatggt tttagttggc ggtgagatca ccaccagcgc
     7261 ctgggtcgat atcgaagaga ttacccgtaa tacggtgcgc gaaattggct atgtgcattc
     7321 cgacatgggc tttgacgcca actcttgcgc ggtactgagc gcaattggca aacagtctcc
     7381 ggatatcaac cagggcgttg accgcgcaga cccgctggaa caaggcgcgg gcgaccaggg
     7441 cctgatgttt ggctacgcga caaatgaaac cgacgtactg atgcctgcgc caatcaccta
     7501 cgcgcaccgt ctggtacagc gtcaggctga agtgcgtaaa aatggcaccc tgccatggtt
     7561 gcgtccggat gcaaaaagcc aggtcacttt ccagtatgac gacggcaaaa tcgtcggtat
     7621 cgacgccgtg gttctctcta cgcagcacgc agaagatatc gaccaaaaat cgctgcaaga
     7681 agcggtgatg gaagagatca tcaaacccat tctgccgtct gaatggttaa atacgtccac
     7741 taagtttttt atcaacccaa ccgggcgttt tgttatcggc ggcccgatgg gcgattgtgg
     7801 tctgaccggt cgtaagatca tcgttgatac ctacggcggt atggcgcgtc acggcggcgg
     7861 cgccttctcc ggtaaagatc cgtctaaagt tgaccgttct gcagcttacg ctgcgcgtta
     7921 tgtcgcgaaa aacatcgtgg cggcaggtct ggcggatcgc tgtgaaatcc aggtctccta
     7981 cgctatcggc gtagcggagc cgacgtccat catggtggaa acgttcggta ctgaaaaagt
     8041 gcctgctgaa cagttgattc tgctggtgcg cgaattcttc gacctgcgcc cgtacggctt
     8101 gattcagatg ctggatctgc tgcacccgat ctacaaagaa actgcggctt acggccactt
     8161 cggtcgcgaa aacttcccat gggaaaaaac cgacaaagcg caactgctgc gcgatgctgc
     8221 cggtctgaaa taatcgcccg cgcctgacgc tgtttttcag tcaggtaaac cataccgtac
     8281 ttatcaaggc cagcgccctg ctggccttta tcattgctga tacacgcaac gttattagat
     8341 gttccagcgt gtatttatac tgaccttttt gtgatgcgca gcacaatccg ctctcctctt
     8401 tcgtttcttc gactacactt ttcatcattc agtttcagca gctatgaaag cggttacatt
     8461 cattttcatt gagaactgac cacctcactg tcggtatgct aactctgcga tgaaaatgtt
     8521 acatagtttt tcagctttgt ctgaatacca ggcgattgat agggttataa gattattaaa
     8581 actattattt ttcagataat taaataatca ccgagataaa tagtagtgta aacgattaca
     8641 ccattgtgat tagcctcaca tctttttacg gcgtactcac ctactcttaa catcgataaa
     8701 attgctaacc caaccggagg gcataatgcc tgacaataaa aaacaagggc gttccaacaa
     8761 ggccatgaca ttttttgtct gctttcttgc agccctggca ggattacttt ttggcctgga
     8821 tatcggcgtt atcgccggtg ctttaccctt cattaccgac gagtttcaga ttaccgcaca
     8881 cactcaggaa tgggtggtca gctccatgat gtttggcgcg gccgtcggcg ctgtcggcag
     8941 cggctggctc tcctttaagc tgggtcgtaa aaaaagcctg atgatcggcg ctatcctgtt
     9001 cgtcgccggt tcgctgttct ccgctgcggc gcctaacgtt gaagtcctga ttatttctcg
     9061 cgtgctgctg ggtctggccg tcggcgtcgc ttcctacact gcaccgttgt acctgtccga
     9121 gatcgcgccg gaaaaaattc gcggcagtat gatctcaatg taccaactca tgatcaccat
     9181 cgggattctg ggcgcttatc tgtccgatac cgcgttcagc tacagcggcg catggcgctg
     9241 gatgctcggc gtgatcatca tcccggccat tctgctgctg atcggcgtct tcttcctgcc
     9301 ggacagcccg cgctggtttg cggcgaaacg ccgtttccat gatgctgaac gcgtcctgtt
     9361 gcgcctgcgt gacaccagtg cggaagcaaa acgtgagctc gatgaaattc gcgaaagttt
     9421 gcaggttaaa cagagcggtt gggcgctgtt caaagagaac agcaacttcc gccgcgccgt
     9481 gtttcttggc attttgttgc aggtaatgca gcaatttacc gggatgaacg tcatcatgta
     9541 ttacgcgccg aaaatcttcg aactggcggg gtacacgaat accacggagc agatgtgggg
     9601 caccgttatt gttggtctga ctaacgtgct ggcaaccttc atcgctatcg gcctggttga
     9661 ccgctggggc cgcaagccga ccctgacgct gggcttcctg gtcatggcga ttggtatggg
     9721 gattctgggt acgatgatgc acatcggcat ccattcaccg tctgcgcaat acttcgctat
     9781 cgctatgctg ctgatgttca tcattggatt tgcgatgagc gctggtccgc tgatttgggt
     9841 actgtgctcc gaaatccagc cgctcaaagg ccgcgatttc ggcatcacct gctccaccgc
     9901 gaccaactgg atcgccaata tgatcgtcgg cgcaacgttc ctgaccatgc tgaacaatct
     9961 gggtaacgcc aacaccttct gggtctacgc tggcctgaac gtgctgttta tcctgctgac
    10021 cctgtggctg gtgccggaaa ccaaacacgt ttcgctggaa cacattgaac gtaacctgat
    10081 gaaaggtcgt aaactgcgcg aaatcggcgc ccacgactaa tccctccacg cttcctcctg
    10141 ccacaggagg aagcgttttt cttgcagtcc ctcttccgtc gcactattct ctgccgctat
    10201 gaaaacccct cgtctcccta tcgctatcca gcaggccgtg atgcgccgtc tgcgggaaaa
    10261 tctcgcccag gcgaacctca agctcgatag acattatccg gagccgaaac tggtgtatac
    10321 gcaacgcggc acctcggcgg gcaccgcctg gctggagagc tacgaaatcc gcctcaaccc
    10381 ggtgttactg ctggaaaaca tcgacacctt tattgcagag gtcgtgccgc atgaactggc
    10441 gcatctgttg gtgtggaagc acttcggacg caaggctccg catggcaagg aatggaagtg
    10501 gatgatggaa agcgtgctgg gcgttccggc cagacgtact catcaatttg cgctgcaatc
    10561 cgtacggcgc aatacctttc cctaccattg ccaatgccag caacatcaac tcaccgtccg
    10621 ccgtcataac cgtgtggtac gcggcgaagc ggtttatcgt tgcgttcact gcggcgaacc
    10681 actggtcgcc gggtagttcc ccgaaacgtc cgggaacttt cctgagcgga ctgattgcat
    10741 acagacacaa ctttcgctac gttgcgggct cgttttgcta tggagtgtgc aatgtaccgt
    10801 aatttttctt ttgctgctgc gttgctggcc gcagcgtttt caggccaggc attggccgac
    10861 ggcattaaca atttttctca ggccaaagcg gcgagcgtca aagtcaatgc cgacgcgccc
    10921 ggcagctttt actgcgggtg ccaaatccgc tggcagggta aaaaaggcgt cgtagacctg
    10981 gagtcctgcg gctataaggt gcgtaaaaac gagaatcgcg ccagacgcat tgagtgggag
    11041 cacgttgtcc ccgcctggca attcggtcat cagcgccagt gctggcagga cggcgggcga
    11101 aaaaactgcg ctaaagaccc ggtctactgc aaaatggaaa gcgatatgca taacctgcaa
    11161 cccgcgattg gcgaagtgaa tggcgatcgc ggcaacttta tgtatagcca gtggaacggc
    11221 ggcgaaggtc agtacgggca gtgcgccatg aaagtggatt ttaaagcgaa gctcgccgag
    11281 ccgcccgccc gcgcccgtgg cgcaatcgcc cgcacttatt tttatatgcg cgaccaatac
    11341 caactgaaac tttcccgcca acaaacgcag ctttttaacg tctgggataa gcagtacccc
    11401 gttaccgcct gggagtgcga gcgcgatgcg cgtatcgcga aggtccaggg taatcataat
    11461 ccctatgtgc aacgcgcttg ccaggcgcga aagagctaac ctacactagc gggattcttg
    11521 ttaacccatg ccctggatag ccaaacgccg gggccatgac gcggattttt ttattatgcg
    11581 tattccccgc atttatcacc ctgaattgtt gacgtccggt acgcagattt cgttatgcga
    11641 agatgcggcc aaccatattg gtcgtgtact gcgcatggga gcgggacaag cgttacagct
    11701 gtttgacggc agcaatcagg tattcgatgc tgaaatcatt agcgccagta agaaaagcgt
    11761 tgaagtgcaa gtgatgaaag gcgaaatcga cgatcgtgaa tcgccgctac atatccatct
    11821 gggccaggtg atgtcgcgcg gtgaaaaaat ggaatttact atccagaaat cgatcgaact
    11881 aggtgtaagc ctcattacgc cactgttctc tgagcgctgt ggcgttaaac tggataatga
    11941 acgtctgaac aaaaagcgcc agcagtggca aaagatcgcc atcgccgcct gcgaacaatg
    12001 cgggcgtaac cggg
//
LOCUS       DAGWFR010000121        11986 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.123, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000121 DAGWFR010000000
VERSION     DAGWFR010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 11986)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11986)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11986
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.123"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            92..1318
                     /locus_tag="MOX77_003291"
     CDS             92..1318
                     /locus_tag="MOX77_003291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3748 domain-containing protein"
                     /protein_id="HCA3358737.1"
                     /translation="MKQITFTPRHHQLTNTNTWTPDSQWLVFDVRPSGASFTGKTIER
                     VNVHTGDVEVIYRAVQGAHVGVVTVHPADNYYVFIHGPENPDETWHYDFHHRRGVIAT
                     PGGVTNLDAMDITAPYTPGALRGGSHVHVFSPNGELVSFTYNDHVLHECDPALDLRNV
                     GVAAPYGPVTVPVQHPREYSGSHWCVLVSRTTPAPRPGSDDINRAYEEGWVGNRQIAF
                     IGDTLSLTGQKVPELFIVDLPCHENGWKQAGDTPLTGTESTMPSPPLGVVQRRLTFTH
                     QRVYPGLTNEPRHWVRSNPQATAIAFLMRDDNGVAQLWLISPQGGEPRQLTHHATGVQ
                     SAFNWHPSGKWLGLVLENRIACCDAQSGKIDFLTARHDNPPSADAVVFSPDGRHVAWM
                     EEVKGFRQLWVTETGR"
     gene            complement(1320..1652)
                     /locus_tag="MOX77_003292"
     CDS             complement(1320..1652)
                     /locus_tag="MOX77_003292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001675643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceK/YidQ family lipoprotein"
                     /protein_id="HCA3358738.1"
                     /translation="MIKNVWLTLIIWNGMLLLGGCSSVMSHTGGKEGTYPGTRASATM
                     IGNDETNWGTKSLAILDMPFTAVMDTILLPWDIFRKDSSVRSRVEKSEEETKMTNAVI
                     PPAKMPPP"
     misc_feature    1895..1968
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01832"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="ROSE (Repression Of Heat Shock gene Expression)
                     occurs in the 5'-region of heat shock genes and acts as an
                     RNA thermometer to modulate expression; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF01832"
     gene            1962..2375
                     /gene="ibpA"
                     /locus_tag="MOX77_003293"
     CDS             1962..2375
                     /gene="ibpA"
                     /locus_tag="MOX77_003293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006687722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock chaperone IbpA"
                     /protein_id="HCA3358739.1"
                     /translation="MRNFDLSPLYRSAIGFDRLFNLLENNQSQSNGGYPPYNVELVDE
                     NHYRIAIAVAGFAESELEITAQDNLLVVKGAHADEQKERTYLYQGIAERNFERKFQLA
                     ENIHVRGANLVNGLLYIELERVIPEANKPRRIEIN"
     gene            2485..2913
                     /gene="ibpB"
                     /locus_tag="MOX77_003294"
     CDS             2485..2913
                     /gene="ibpB"
                     /locus_tag="MOX77_003294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462708.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock chaperone IbpB"
                     /protein_id="HCA3358740.1"
                     /translation="MRNYDLSPLLRQWIGFDKLANALQNSGESQSFPPYNIEKSDDNH
                     YRITLALAGFRQEDLDIQLEGTRLTVKGTPEQPENEPKWLHQGLVMQPFSLSFTLAEN
                     MEVSGATFTNGLLYIDLTRNEPETIPPQRIAINERSALNS"
     gene            3107..4768
                     /locus_tag="MOX77_003295"
     CDS             3107..4768
                     /locus_tag="MOX77_003295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative transporter"
                     /protein_id="HCA3358741.1"
                     /translation="MSDIALTVSVLALVAVVGLWIGNIKVRGVGFGIGGVLFGGIIVG
                     HFVDQAGVTLSGDMLHFIQEFGLILFVYTIGIQVGPGFFASLRVSGLRLNLFAVLIVI
                     MGGLVTAILHKIFAIPLPVVLGIFSGAVTNTPALGAGQQILRDLGTPVDLVDQMGMSY
                     AMAYPFGICGILLTMWLMRLIFRVNVEAEAQKHESSLANGHSLIQTMNIRVENPNLNN
                     MAIQDVPILNSDKIICSRLKRDDTLMVPSPGTIIQAGDLLHLVGQPTDLHNAQLVIGK
                     EVDTSLSTRGTDLRVERVVITNEKVLGKRIRDLHFKERYDVVISRLNRAGVELVASSD
                     ASLQFGDILNLVGRPASIDAVANVVGNAQQKLQQVQMLPVFIGIGLGVLLGSIPLFVP
                     GFPVALKLGLAGGPLIMALILGRIGSIGKLYWFMPPSANLALRELGIVLFLAVVGLKS
                     GGDFVDTLTQGEGLSWIGYGIFITAIPLITVGLLARIFAKMNYLTLCGMLAGSMTDPP
                     ALAFANNLHATSGAAALSYATVYPLVMFLRIITPQLLAVIFWGMG"
     gene            5211..5558
                     /locus_tag="MOX77_003296"
                     /pseudo
     CDS             5211..5558
                     /locus_tag="MOX77_003296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462706.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YidH family protein"
     gene            5548..5910
                     /locus_tag="MOX77_003297"
     CDS             5548..5910
                     /locus_tag="MOX77_003297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF202 domain-containing protein"
                     /protein_id="HCA3358742.1"
                     /translation="MPDSRKARRQNDPGLQPERTSLAWFRTLLGYGALMALAVRHYWH
                     QAGFLFWVSISVLAIVAVILWRYTLSRNLMDVAHSDFSETHVMRDKFLISLAVLSLAI
                     LFAVTHIRQLIAFIGDFI"
     gene            5907..6437
                     /locus_tag="MOX77_003298"
     CDS             5907..6437
                     /locus_tag="MOX77_003298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HCA3358743.1"
                     /translation="MTGRQDIVVSNDQIQVVVNRQNSQRPQQLYRNLQRLGIRNVHFI
                     PLLEHDRNGMLTEDSLCSADWGRFLNSVFDIWVREDIQRISVRLFDETLQQWCGGRNG
                     AKTPDKAPLSAECQKCSLLRFCGGGCPEHRDSQGKNQLCEGYQTFFNYSSPHMRVMRD
                     LLKQHRSPEELMAMLR"
     gene            complement(6519..7841)
                     /gene="dsdA"
                     /locus_tag="MOX77_003299"
     CDS             complement(6519..7841)
                     /gene="dsdA"
                     /locus_tag="MOX77_003299"
                     /EC_number="4.3.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-serine ammonia-lyase"
                     /protein_id="HCA3358744.1"
                     /translation="MENILKLIARYPLVEDLVALKETTWFNPGATSLAQGLPYVGLTE
                     QDVNAAHDRLARFAPYLAKAFPQTAAAGGIIESDVVAIPAMQKRLEKEYGQTIDGEML
                     LKKDSHLAISGSIKARGGIYEVLTHAEKLALEAGLLTTDDDYSVLLSPEFKQFFSQYS
                     IAVGSTGNLGLSIGIMSACIGFKVTVHMSADARAWKKAKLRSHDVTVVEYEDDYGVAV
                     EQGRKAAQSDPNCFFIDDENSRTLFLGYAVAGQRLKAQFAQQGRVVDASHPLFVYLPC
                     GVGGGPGGVAFGLKLAFGDNVHCFFAEPTHSPCMLLGVYTGLHDAISVQDIGIDNLTA
                     ADGLAVGRASGFVGRAMERLLDGLYTLDDQTMYDMLGWLAQEEGIRLEPSALAGMAGP
                     QRICASVAYQQRHGFSQTQLGNATHLIWATGGGMVPEDEMEQYLAKGR"
     gene            complement(7859..9196)
                     /gene="dsdX"
                     /locus_tag="MOX77_003300"
     CDS             complement(7859..9196)
                     /gene="dsdX"
                     /locus_tag="MOX77_003300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-serine transporter DsdX"
                     /protein_id="HCA3358745.1"
                     /translation="MHAQIWVVSTLLISIVLIVLTIVKFKFHPFLALLLASFFVGAMM
                     GIGPLEMVTAIENGIGGTLGFLAAVIGLGTILGKMMEVSGAAERIGLTLQRCRWLSAD
                     VIMVLVGLICGITLFVEVGVVLLIPLAFSIAKKTHTSLLKLAIPLCTALMAVHCVVPP
                     HPAALFVANKLGADIGSVIVYGLLVGLMASLVGGPLFLKFLGNRLPFKPVPTEFADLE
                     VRAENTLPSLGATLFTVLLPIGLMLVKTVAELNMAKDGTLYTLLEFIGNPITAMFIAV
                     FVAYYILGLRQHMGMSALLTHTENGFGAIANILLIIGAGGAFNAILKSSGLADTLAVI
                     LSNMHMHPILLAWLVALILHAAVGSATVAMMGATAIVAPMLPLYPDVSPEIIAIAIGS
                     GTIGCTIVTDSLFWLVKQYCGATLNETFKYYTTATFIASVVALAGTFLLSFII"
     gene            9422..10345
                     /gene="dsdC"
                     /locus_tag="MOX77_003301"
     CDS             9422..10345
                     /gene="dsdC"
                     /locus_tag="MOX77_003301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator DsdC"
                     /protein_id="HCA3358746.1"
                     /translation="MEPLRDTRNRLLNGWQLSKLYTFEVAARHQSFALAADELSLSPS
                     AVSHRINQLEAELGIQLFVRSHRKVELTHEGKRVFWALKSSLDTLNQEILDIKNQELS
                     GTLTVYSRPSIAQCWLVPALGDFTRRYPSISLTMLTGNDNVNLQRAGIDLAIYFDDAP
                     SAQLTHHFLMDEAILPVCSPDYARRFALQDNLNNLRHCTLLHDRQAWSNDSGTDEWHS
                     WAQHFAVNLPDSSGIGFDRSDLAVIAAMNHIGVAMGRKRLVQKRLDSSELIAPFGDMR
                     LKCHQHYYVTTLPGRQWPKIEAFIRWLQEQV"
     gene            10409..11494
                     /locus_tag="MOX77_003302"
     CDS             10409..11494
                     /locus_tag="MOX77_003302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulase family glycosylhydrolase"
                     /protein_id="HCA3358747.1"
                     /translation="MVKILGGVVFKPLIASLILTSAVVYAKPMPLTAARYAQQLGVGM
                     DVDWARTERGIREFDPLVVRDFKAKGLTHVRIRVAGAPTEARLIHLRKLVEACEYYGV
                     IPIIAYQADAYKTDPSASHEKELINWWSVVARYFGQTSPLLGFDLIYEPADKLNHNMA
                     SLNRVYDKTIRLIHAIDPQRMIFVAPRMRAAPEDLSALKLPAQSQNYVLAEWHIFPWG
                     PLKSGGKYPWTSGTTAEKAAIRARINAAVRWQHKTGHASWVGGWAPGESIKMTPIASQ
                     FAFARFMACELKKAHIPYAINADTQFYDGEEGAWRPAQEPLLNAMIAPECETPGKKPG
                     EGNVKPSVPDAISVTPAAASTPRSAIP"
     gene            complement(11421..>11986)
                     /gene="emrD"
                     /locus_tag="MOX77_003303"
     CDS             complement(11421..>11986)
                     /gene="emrD"
                     /locus_tag="MOX77_003303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="multidrug efflux MFS transporter EmrD"
                     /protein_id="HCA3358748.1"
                     /translation="AFNCYLLMLIGGLAGIAVFEACSGVLMGAVLGLSSMVVSILFIL
                     PIPAAFFGAWFAGRPNKRFSALMWQSVICCLLAGLMMWIPGWFGVMNVWTLLIPAALF
                     FFGAGMLFPLATSGAMEPFPFLAGTAGALVGGLQNIGSGVLAWLSAMLPQTGQGSLGL
                     LMTLMGLLILACWLPLASRISHQGQTV"
BASE COUNT         2732 a         3151 c         3303 g         2800 t
ORIGIN      
        1 cgggcctggc tatcccaacg atacgctaaa gcctgaaagt gaagcccgtg tgcagtatga
       61 tgacgagcat cgtctcttat caggacatcc catgaaacaa atcaccttta cgccgcgcca
      121 tcaccagctt accaacacca atacctggac acctgacagc cagtggctgg tctttgatgt
      181 gcggccttca ggcgcgtcat ttacgggcaa gactattgag cgtgtcaatg tgcataccgg
      241 cgacgtggag gtgatttatc gcgccgtgca gggcgcgcat gtcggtgtgg tgacggtgca
      301 tcctgccgac aattactatg tgtttattca tggccctgaa aaccctgatg agacgtggca
      361 ttacgatttc caccaccgtc ggggcgttat tgcaacgccg gggggcgtga ctaacctcga
      421 tgcgatggat attactgcgc cgtatactcc cggcgcgctg cgcggcggca gccacgtcca
      481 tgtatttagc ccgaacggcg agctggtgag ttttacctat aatgaccacg ttctgcatga
      541 gtgcgatccg gcgctggatc tgcgtaatgt cggcgtggcc gcgccgtatg ggccggtaac
      601 ggtgccagtt cagcatccgc gcgaatacag cggtagccac tggtgcgtac tggttagccg
      661 cacgacgcct gcgccgagac ctggcagcga tgacattaac cgcgcctatg aagagggctg
      721 ggtgggcaac cgccagatcg cctttattgg cgatacgctg tcgctgacgg gccaaaaagt
      781 cccggagttg tttattgtcg atttaccgtg tcatgaaaac ggctggaaac aggcaggcga
      841 cacgccgctg acgggaaccg aatcaacaat gccatcgccg ccgttgggcg tagttcagcg
      901 gcgtcttacc tttactcacc agcgtgttta tcctggactc actaacgaac cacgccactg
      961 ggtacgcagt aatccgcagg cgacggcgat cgcctttttg atgcgggacg ataacggcgt
     1021 agcgcaactg tggctgatat cgcctcaggg aggcgagccc cggcagttaa cgcatcatgc
     1081 gaccggcgta cagtcagcgt ttaactggca tccgtcgggt aaatggctgg gactggtgct
     1141 ggaaaatcgg attgcctgct gcgacgcaca aagtgggaag atcgacttct taaccgccag
     1201 gcacgacaac ccgccgtctg cggacgccgt cgttttttca ccggatgggc gacacgtcgc
     1261 atggatggaa gaggtgaaag gtttccgtca gctatgggtg acggaaaccg ggcgataaat
     1321 cagggaggag gcatcttcgc cggggggatg acggcattgg tcattttcgt ctcctcctcg
     1381 cttttctcga cgcgcgatct taccgaactg tctttgcgga agatgtccca cggcagaagg
     1441 atcgtatcca tcacggcggt aaacggcata tccaggatgg ccaacgattt ggtgccccag
     1501 tttgtctcat cgttaccgat catcgtagcg ctggcgcgcg tgccaggata agtaccctct
     1561 ttaccgccgg tgtgcgacat gacgcttgaa caaccgccta ataaaagcat cccattccat
     1621 attatcagcg ttaaccacac gttttttatc atcactcatt catctgttgg ttgtcgttat
     1681 ttgcatgatg agttatagcg atccgttgct aaaaataaca tcaccagtac gtggcactgt
     1741 ggcggtaatc gcactttaac aatcagtgct gtcccaacca gtctatgcaa tagccaataa
     1801 actgcaaaaa aaagtcggat taaaatactt gaaaagtacg tattcagacc catttataag
     1861 acgtagtgaa tagaagggca cgcctgatgg gtgttctggc aatcctggcc tgtccatgat
     1921 ggaaggtctg acattctcgc tgatttcagg agtttatgat tatgcgtaac tttgatttat
     1981 ccccgctgta ccgttctgcc attggttttg atcgtctgtt taacctgctt gaaaataacc
     2041 aaagccaaag taatggcggc taccctccgt acaacgttga gctggtagac gaaaaccact
     2101 accgcatcgc cattgccgtt gccggtttcg cggaaagcga actggagatt actgcccagg
     2161 ataatttact ggtggtaaaa ggcgctcatg cggacgagca gaaagaacgt acttacctgt
     2221 atcagggcat tgccgagcgt aactttgagc gtaagttcca gttagcggag aacattcacg
     2281 ttcgtggcgc aaacctggtc aacgggctgc tgtatatcga actggagcgc gtgattccgg
     2341 aagcgaacaa accgcgccgt atcgaaatta actgattccg tcgggtcgcg ttgcgcggcc
     2401 tgtcatccca tgctcgccgt cagggagcat attcgcacgt aaagtgtgaa ggtaaaaact
     2461 cgcttcttag aaggagaaat gattatgcgt aactacgatt tatccccact gttgcgtcaa
     2521 tggatcggtt ttgacaagct ggccaatgcg ctgcaaaaca gcggcgaaag ccagagcttc
     2581 ccgccctata acatcgaaaa aagcgacgat aaccattatc gcattacctt agcgttagcc
     2641 ggtttccgtc aggaagatct ggatattcaa ctggaaggca cgcgcctgac ggtgaaaggc
     2701 acgccggaac agccggaaaa cgagcccaaa tggttacatc agggcctggt catgcagcct
     2761 tttagcctga gctttacgct ggctgaaaat atggaagttt ccggcgcgac gtttaccaac
     2821 ggcctgctgt atattgattt aacccgtaac gagccggaaa ccattccgcc gcagcgtatc
     2881 gccattaacg aacgctccgc attaaatagc taataagctc cttgccttgc cccgccagag
     2941 atggcggggc ttttttgtgc cacgaaaaag ggtaagacgt tgccgaagtc aggacgtctg
     3001 tgcggttttg taatatgaga atgtgcgcca tgctgtatat atgccttaac ggttcagtca
     3061 taatccctat aaattgaaat gttactcaca gggaagagaa gatgagatga gtgatatcgc
     3121 attgacggtc agcgttctgg cgttggtggc ggttgtcggt ttatggatcg gcaacattaa
     3181 agtgcgcggt gtcggctttg gtattggcgg tgtgttgttc ggcggtatta tcgtcggcca
     3241 cttcgtcgat caggctgggg tgacgctgag cggcgatatg ctgcacttta tccaggagtt
     3301 cggcctgatc ctttttgttt ataccatcgg catacaggtg gggccggggt ttttcgcctc
     3361 gctgcgcgtt tccgggctac gtctgaatct gtttgccgtt ctgattgtga ttatgggcgg
     3421 gttggtcacc gcgattctgc ataaaatttt cgctattccg ctgccggtag tgctggggat
     3481 tttctccggc gcagtcacca atacgcctgc gttaggggcg ggtcagcaaa tcctgcgcga
     3541 tctgggaacg ccagtggatc tggtagatca gatggggatg agctatgcga tggcgtatcc
     3601 gtttggcatc tgcggtattt tgctcaccat gtggctgatg cggctgattt ttcgcgttaa
     3661 cgtcgaggcg gaggcgcaga agcacgaatc ctctctcgct aacggccatt cattaattca
     3721 gacaatgaat atccgtgtcg agaatccgaa cctcaataat atggctatcc aggatgtgcc
     3781 gatcctgaac agcgataaaa tcatttgctc acgcctgaaa cgcgatgaca cgctgatggt
     3841 gccgtcgccg gggacgatta tccaggcagg cgacctgctg cacctcgtcg gccaacctac
     3901 cgacctgcat aacgcgcaac tggtgatcgg taaggaagtg gacacctcgt tgtcgacgcg
     3961 cggcacggat ttacgtgtcg agcgtgtggt catcaccaac gaaaaagtgc tcggcaaacg
     4021 tatccgcgat ttgcacttta aagagcgtta tgacgtggtt atctcccgcc ttaaccgcgc
     4081 gggcgttgag ctggtcgcca gcagcgacgc tagcctgcag tttggcgaca ttctcaatct
     4141 ggtggggcgt cctgcctcga ttgatgcggt agccaatgtg gtcggcaacg cgcagcaaaa
     4201 actccagcag gtgcagatgc tgccggtgtt tatcggcatc ggattagggg ttctgcttgg
     4261 gtcaatcccg ttgtttgtgc cgggattccc ggtcgcgtta aaactggggc tggccggcgg
     4321 gccgttgatc atggcgctaa ttttggggcg tatcggcagc atcggtaagc tgtactggtt
     4381 tatgccgccg agcgccaacc tcgcgctgcg tgaattaggc atcgttttgt ttctggcggt
     4441 cgttggactg aaatccggcg gcgattttgt cgatacgctg acacagggcg aaggattaag
     4501 ctggattggc tacggtattt tcatcaccgc tattccgctg attaccgtcg gtttgctggc
     4561 gcgaattttt gccaaaatga actacctgac gctgtgcggg atgctggccg gttcgatgac
     4621 cgatccgcca gcgctggcat ttgccaacaa tcttcatgcc accagcggcg cggcggcgct
     4681 ctcttacgcg accgtctatc cgttagtgat gttcctgcgt attatcacgc cacaactgct
     4741 ggcggtgatt ttttggggaa tgggttagcg cctgatggcg cgttgcttat ccggcctatg
     4801 cactgtgtta aatccaggct ggataacgcg cgccgcaccg gtcacacttc tgctcttctt
     4861 cttatctctt tcctcaatga acgtgctaat cagcgtaatg gcaacgagca taattccaat
     4921 tttttcagtt agttatcaat cttcatcgcc ttttttttcg tcgcaacggg tagtttttca
     4981 gcttttaatt cggcaataat gcctttcctg gcggtggcgc tgaaaaaggt cgcaactgaa
     5041 atgaaaaata gcggcaatga gcgcggttgc gccgaaacac gtcaccagtg aactacagtt
     5101 attttgcaat aagattccct tgctgcggga taatgtgaag catatcagca acaacgtgag
     5161 tggtattctg aaaacgaacg ggaatacata agaacgtaaa aggagtcgtc atgaagattt
     5221 cccgcctcgg agaagcgccg gattatcgct tctcactggc aaatgagcgc acctttctgg
     5281 cgtagattcg cacctcgctg ggatttctgg cggcaggcgt cggtcttgat cagctcgccc
     5341 cggattttgc cacgccggtg atccgtgaac tgctggcgct actgttgtgt ctgtttgcgg
     5401 gcggcctggc gatttatggc tatctacgct ggttacgtaa tgaaaaagcg atgcgcctga
     5461 aagaggattt gccttatacc catagcctgt tgatcatcag cgttattttg atgattgtcg
     5521 cggtgatagt gatgaggctg gtactgtatg ccggatagtc gtaaagcccg tcggcagaac
     5581 gatccgggac tgcaaccgga gcgtacgtcg ctggcctggt ttcgcacgct gctgggatac
     5641 ggggcgttaa tggcgttagc cgtcaggcac tactggcatc aggcggggtt cttgttctgg
     5701 gtgtcaatca gcgttctggc gatagtggcg gtgattcttt ggcgttatac cctgagtcgt
     5761 aatttgatgg atgtcgcgca tagcgatttt tccgaaactc atgtcatgcg tgacaaattt
     5821 ttgatctccc tcgcggtgtt gtcgctcgca atcctgtttg ctgttaccca tattcgccaa
     5881 cttattgcat ttatcgggga ttttatatga caggacgtca ggacattgtc gtgagtaatg
     5941 accagattca ggtcgtcgta aatcgccaga atagccagcg ccctcagcaa ctgtaccgta
     6001 acttacaacg gctcggcatt cgcaatgtcc attttatccc attgttggaa catgaccgga
     6061 acggaatgtt gaccgaggat tcattgtgtt cagcagactg ggggcggttt ttaaatagcg
     6121 tatttgatat ttgggtacgt gaagatattc agcgtatctc ggtccgcctt tttgatgaga
     6181 cgctacagca gtggtgcggc ggcaggaatg gcgctaaaac gccggacaag gcgccgctaa
     6241 gcgctgaatg tcagaagtgc tctttattac gattttgcgg cggcggatgc cctgagcatc
     6301 gggatagcca ggggaaaaat cagctttgcg agggctacca gacctttttt aactactcct
     6361 cgccgcatat gcgggtgatg cgggatttac tgaaacagca tcgctcgccg gaggagttga
     6421 tggcgatgct gcgttaacgt cacaggcctg ataagcgtag cgccatcagg cgatggcgtg
     6481 ccggatggcg ctgccgtctt tccggcacta agcgagtatt agcgtccttt tgccaggtat
     6541 tgttccattt catcctccgg caccatgccg cccccggttg cccatatcag atgcgtcgcg
     6601 ttgccgagct gcgtctgact gaatccatgc ctttgctgat acgcgacgga ggcgcaaatg
     6661 cgctgtggcc cggccatccc cgccagagct gatggctcca gtcgaattcc ttcctcctgc
     6721 gccagccagc ccagcatgtc atacattgtt tgatcgtcta aggtatagag gccgtcaagc
     6781 agacgctcca ttgcccgacc aacaaagccc gaagcgcgac ctaccgccag gccgtcagcc
     6841 gccgtcaggt tatcaatacc gatatcttgt actgagatgg catcgtgcag accggtataa
     6901 acgccgagta acatgcaggg tgaatgggtc ggttcggcaa agaaacagtg gacgttgtcg
     6961 ccaaacgcca gtttcaggcc aaaggcgacg ccgccagggc cgccgccaac gccgcacggc
     7021 agataaacaa acagtgggtg gctggcgtca acgacgcgtc cctgctgcgc gaattgcgct
     7081 ttcagacgct gacccgctac cgcatagccc agaaatagcg tgcgagagtt ttcatcatcg
     7141 ataaagaaac agtttggatc ggattgcgct gctttacgac cctgctcaac cgccacgccg
     7201 taatcatctt cgtattccac gaccgtcacg tcgtggctac gcagcttcgc ctttttccag
     7261 gcgcgggcgt cggcagacat atgtaccgtc actttaaaac cgatgcaggc gctcatgata
     7321 ccgatcgata gccccagatt gccggttgaa ccgacggcga tactgtactg gctgaagaat
     7381 tgtttaaatt ccggcgaaag caacacgcta tagtcatcgt cggtggttaa cagacccgcc
     7441 tccagcgcca gtttttccgc gtgcgttagc acctcgtaga tgccgccgcg cgctttaatg
     7501 gaaccagaga ttgctaggtg actgtctttt tttaatagca tttcaccgtc gatcgtttgc
     7561 ccatactctt tttccagccg tttttgcatg gccggaatag cgaccacgtc agattcgatt
     7621 atgccgccag cggcagcggt ttgcggaaac gcttttgcca gatacggcgc aaagcgcgcc
     7681 agacggtcat gggcggcgtt tacgtcctgc tccgtcaggc cgacatacgg tagaccttgt
     7741 gcaagagagg tggcgcccgg gttaaaccag gtggtttctt tgagggcgac cagatcctcg
     7801 accaaaggat accgggcgat gagctttagt atgttttcca tagtacgtct ctttacgatc
     7861 agatgataaa ggaaagcagg aatgtgccag ccagtgcaac gacagatgcg ataaacgtgg
     7921 ccgtcgtata gtatttaaac gtttcattca gcgtagcgcc gcaatactgc ttgaccagcc
     7981 agaacaggga atcggtcacg atcgtgcagc caatggtgcc ggaaccgatg gcaatagcga
     8041 tgatctccgg gctaacgtca ggatagagcg gcagcatggg cgcaacaatc gcggtggcgc
     8101 ccatcatcgc caccgtcgca gagccgaccg ccgcgtgcag aatcagcgct accagccatg
     8161 ccagcagaat cgggtgcata tgcatatttg agaggatcac cgccagcgtg tccgccagtc
     8221 cgctactttt gagaatggcg ttgaacgcgc cgcccgcgcc gataatcagc aggatgttcg
     8281 caatggcgcc aaagccgttt tcggtgtggg taagtagcgc gctcataccc atatgctggc
     8341 gcagaccgag tatgtaatac gccacaaaga cagcgataaa catcgcggtg atcggattac
     8401 cgataaactc cagcagcgta tacaacgtgc cgtctttcgc catattcagt tcagcgacgg
     8461 ttttcaccag catcaggcca atcggcagca gaacggtaaa cagcgttgcg cccagcgacg
     8521 gcagggtgtt ttcggcacgc acttcaagat ccgcaaactc tgtcggtacg ggcttgaacg
     8581 gcagacgatt acccagaaac tttaagaaca gcgggccgcc gaccaatgag gccatcagtc
     8641 cgaccagcag accgtagaca atcaccgagc cgatatccgc ccccagttta tttgcgacaa
     8701 acagcgcagc cggatgcggc ggtaccacgc aatggacggc catcagcgcg gtacacagcg
     8761 gaatggccag cttcagcagc gaggtatggg tctttttagc gatagaaaac gccagtggga
     8821 tgagcaacac gacgcccact tccacgaaca acgtgattcc gcaaatcagc cccaccagta
     8881 ccatgatcac gtcagcagag agccagcggc agcgctggag cgtaagcccg atgcgttccg
     8941 ccgcgccgga aacctccatc attttgccga ggatggtgcc aagaccgata acggcggcca
     9001 gaaaaccgag cgtaccgcct attccgtttt ctatcgccgt gaccatctcc agcggcccta
     9061 tgcccatcat cgcgccgaca aagaaactgg cgagcagtaa cgccaggaag gggtggaatt
     9121 taaacttcac gatggtcaat acgattaaca cgatgctgat cagcagcgtg ctcactaccc
     9181 agatttgagc gtgcatatct cacctaccct gtgattaatc tgttcttatt ggacagaaaa
     9241 acagcacacc ctgacaaacg atataatttg ccattcacat gatgtaaatt gaatcaacta
     9301 tgtgatttcc atctaatatt gcctttattt tgcgatatgg ttcattttac ttcatctatg
     9361 tgcggatttt ttcagcgcgt ttttttacac ttcgggaaat taaaagatga ctgaggttgc
     9421 catggaaccc cttcgcgata cccgaaaccg cttactcaac ggctggcagt tatccaaact
     9481 ctatactttt gaagtcgcgg ccagacacca gtcctttgct ctggcggcag atgagctgtc
     9541 gttaagcccc agtgcggtaa gccatcgtat caatcaactg gaagccgagt tgggaatcca
     9601 gctatttgtc cgctctcacc gtaaagtgga gcttacccat gaaggcaaac gggtattctg
     9661 ggcgctgaaa tcgtcgctgg atacgttgaa tcaggaaatc ctcgatatca aaaatcagga
     9721 actgtccggc acgttgaccg tgtattcacg cccctctatc gcccagtgct ggctggtgcc
     9781 cgcgttgggg gactttaccc gtcgctatcc gtcaatttct ctcactatgc tgaccggcaa
     9841 cgataacgtt aacctacagc gtgccggcat tgacctggct atctattttg acgatgcgcc
     9901 gtcggcgcag ctcacgcacc attttttaat ggatgaggcg attttgcccg tttgcagccc
     9961 ggattacgcc cgtcgtttcg ccttgcagga caacctgaat aacctgcggc actgtacgct
    10021 cttacacgac agacaggcgt ggagtaacga ttctggcacc gatgagtggc acagttgggc
    10081 gcagcatttt gcggtaaatt tgccggattc atccggcatt ggcttcgatc gttctgattt
    10141 agcggtgatt gccgcgatga accatattgg cgtggcgatg ggacgtaaac gactggtgca
    10201 aaagcgtctc gacagcagtg aactgattgc gccttttggt gacatgagac tgaaatgtca
    10261 tcagcattat tatgtcacca ctctgcctgg caggcagtgg ccgaaaatcg aggcatttat
    10321 tcgctggttg caggaacagg tgtgaagatt tattacgctt tgccgctaca cctgccggga
    10381 gtgaatatgc taaatacgtg ctatcaccgt ggtaaaaatt ttagggggcg tcgtgtttaa
    10441 accgcttatt gcctctctca tactgaccag cgcggtcgtc tatgcgaaac cgatgccttt
    10501 gacggcggcg cgctatgcgc agcagcttgg cgttgggatg gatgttgact gggcgcgaac
    10561 ggaacggggt attcgcgagt ttgatccgtt ggtcgtgcgg gattttaagg caaaagggtt
    10621 aacgcatgtc cgtattcgtg tggcaggcgc gccgacggaa gcgcgcctca tccatttgcg
    10681 taagctggta gaggcctgcg aatactatgg cgtcataccc attattgcct atcaggcgga
    10741 tgcgtataaa accgatccca gcgccagcca tgaaaaggag ctgatcaact ggtggagcgt
    10801 ggtcgcgcgc tattttggtc agacatcccc gcttctgggg ttcgatctca tttatgagcc
    10861 tgccgacaaa cttaatcata atatggcgtc gctgaatcgc gtatatgaca aaaccatccg
    10921 cctgattcac gccattgacc cacagcggat gattttcgtt gccccccgca tgcgcgccgc
    10981 gccggaggat ttatcggcgc ttaaactgcc ggcgcaaagc cagaactatg tactggcgga
    11041 gtggcacatc ttcccgtggg gacccctgaa aagcggcggt aaatatccgt ggacgtcagg
    11101 cacgacggcg gaaaaagcgg cgattcgggc acggattaat gccgcggttc gctggcagca
    11161 taagaccggc catgcaagct gggtgggcgg atgggcgccg ggagagtcga taaaaatgac
    11221 gccgatcgct tcacagttcg cgtttgcccg ttttatggcc tgcgagctga aaaaagcgca
    11281 tattccgtat gcgataaacg cggacactca gttttatgac ggcgaagaag gagcgtggcg
    11341 tccggcgcag gagcccctgc tcaatgcgat gatcgcgccg gaatgtgaaa cgcccggcaa
    11401 aaagccgggc gaggggaatg ttaaaccgtc tgtccctgat gcgatatccg tgacgccagc
    11461 ggcagccagc acgccaagat cagcaatccc ataagggtca tcagcaatcc cagactgccc
    11521 tgaccggttt gcggcagcat tgccgaaagc cacgccagta cgccggaacc aatattttgc
    11581 agcccgccga ccagcgcgcc agcggtgcct gcgaggaacg gaaacggctc catcgcgccg
    11641 ctggtggcca gtggaaataa catcccggcg ccgaagaaaa acagcgcagc ggggatgagt
    11701 agcgtccaga cgttcatcac gccaaaccag ccgggaatcc acatcataag gcctgccagc
    11761 agacagcaaa taactgactg ccacatcagg gctgagaagc gtttattcgg gcgtccggca
    11821 aaccaggcgc cgaagaacgc cgccggaatc ggcagaataa acagaatgct taccaccata
    11881 ctgctgagac ctaatactgc tcccatcagc acgccggaac aggcttcaaa gaccgcaatg
    11941 ccagccagcc cgccgattag catcagcagg taacagttaa atgcgc
//
LOCUS       DAGWFR010000122        11982 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.124, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000122 DAGWFR010000000
VERSION     DAGWFR010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 11982)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11982)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11982
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.124"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..113
                     /locus_tag="MOX77_003304"
     CDS             <1..113
                     /locus_tag="MOX77_003304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="chemotaxis protein"
                     /protein_id="HCA3358749.1"
                     /translation="HQQQQRAREVAAVKTPAAVSSPKAAVADGSDNWETF"
     gene            complement(282..2573)
                     /gene="opgB"
                     /locus_tag="MOX77_003305"
     CDS             complement(282..2573)
                     /gene="opgB"
                     /locus_tag="MOX77_003305"
                     /EC_number="2.7.8.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017465680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerol--membrane-oligosaccharide
                     glycerophosphotransferase"
                     /protein_id="HCA3358750.1"
                     /translation="MSELLSVALFLASVLIYAWKAGRNTWWFAATLTVLGLFVILNIT
                     LYASDYFTGDGINDAVLYTLTNSLTGAGVGKYILPGIGIALALVAVFGALGWVLRRRR
                     HHPHHVGYSLLALLLALGSVDASPAFRQITELVKSQMRDGDPDFAVYYKEPAKTIPHP
                     KLNLVYIYGESLERTYFDNDAFPNLTPELGALKNEGLDFSHTMQLPGTDYTIAGMVAS
                     QCGIPLFAPFEGNASASVSSFFPQNICLGDILKNSGYQNYFVQGANLRFAGKDVFLKS
                     HGFDHLYGAEELKTVVADPSYRNDWGFYDDTVLDEAWKKFEALSRSGQRFSLFTLTVD
                     THHPDGFISRTCNRKRYDYDGKPNQSFSTVSCSQENIAEFINKIKASPWFKDTVIVVS
                     SDHLAMNNTAWKYLNKQDRNNLFFILRGDKPQQETLAVKRNTMDNGATVLDILGGDNF
                     IGLGRSSLSGQSLSEVFLNVKEKVLAMKPDIIRLWNFPKEIKDFTVDRDKNMIAFSGS
                     HFRLPLLLRVSDKRVEPLPESEYSAPLRFQLADFAPRDNFVWIDRCYKMAQLWAPALA
                     LSTDWCVSQGQLGGQQTVQHVDKAQWQGKTAFKDTMIDMERYKGNVDTLKIVDNDIRY
                     KADSFIFNVAGAPEEVKQFSGISRPESWGRWSNAQLGDEVKIEYKAPLPKKFDLVITA
                     KAFGDNANRPIPVRVGNEEQTLVLGHDVSTITLHFNNPTDANTLVIAPPAPVSTNEGN
                     ILGHSPRKLGIGMVEIKVVNVES"
     gene            complement(2856..3317)
                     /locus_tag="MOX77_003306"
     CDS             complement(2856..3317)
                     /locus_tag="MOX77_003306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2501 domain-containing protein"
                     /protein_id="HCA3358751.1"
                     /translation="MNTAKHVLCCAAIASVLISTSGIAASQLSAQGANAQQGGMSLSA
                     LTGLLSRGAQSLSADNMNNAAGILQYCAKQKLASATNVENVKNQILNKLGLDTTQQEQ
                     DTNYLNGLQGLLKTKDGQQLNLNNIGSTPLAEKVKTKACDLVLQQGLNFLS"
     gene            complement(3375..4112)
                     /gene="dnaC"
                     /locus_tag="MOX77_003307"
     CDS             complement(3375..4112)
                     /gene="dnaC"
                     /locus_tag="MOX77_003307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication protein DnaC"
                     /protein_id="HCA3358752.1"
                     /translation="MKNVGDLMQRLQKMMPAHITPAFKTGEELLAWQKEQGEIRAAAL
                     ARENRAMKMQRTFNRSGIRPLHQNCSFDNYRVECDGQMNALSKARQYVDEFDGNIASF
                     VFSGKPGTGKNHLAAAICNELLLRGKSVLIITVADIMSAMKDTFSNRETSEEQLLNDL
                     SNVDLLVIDEIGVQTESRYEKVIINQIVDRRSSSKRPTGMLTNSNMEEMTKMLGERVM
                     DRMRLGNSLWVNFSWDSYRSRVTGKEY"
     gene            complement(4115..4654)
                     /gene="dnaT"
                     /locus_tag="MOX77_003308"
     CDS             complement(4115..4654)
                     /gene="dnaT"
                     /locus_tag="MOX77_003308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein DnaT"
                     /protein_id="HCA3358753.1"
                     /translation="MSSRILTSDVIGIDVLLHDHHAVLAKSTGGAVAVFANNAPAFYA
                     VTPARMAELLALEEKLSRPGSDVALDAQFYEEPEAAPVAIPCGKFAMYPAWQPDADFQ
                     RQAALWGVALREPVTAEELAAFIAYWQAEGKVFHHIQWQQKLARSVQISRSSNGGMPQ
                     RDINSVSEPDNHIPPGFRG"
     gene            complement(4747..5220)
                     /locus_tag="MOX77_003309"
     CDS             complement(4747..5220)
                     /locus_tag="MOX77_003309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter"
                     /protein_id="HCA3358754.1"
                     /translation="MGIIDFLLALMQDMILSAIPAVGFAMVFNVPHRALPWCALLGAL
                     GHGLRMLMMSAGFNIEWSTFMASLLVGSIGIQWSRWYLAHPKVFTVAAVIPMFPGISA
                     YTAMISAVKISHLGYSEPMMITLLTNFLKASSIVGALSIGLSVPGLWLYRKRPRV"
     gene            complement(5211..5987)
                     /locus_tag="MOX77_003310"
     CDS             complement(5211..5987)
                     /locus_tag="MOX77_003310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418784.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter ThrE family protein"
                     /protein_id="HCA3358755.1"
                     /translation="MQEEQSIQRAVTRLCIQCGLLLLQHGAESALVDELSTRLGLALG
                     IDSVESAISSNAIVLTTIKDGQCLTSTRKNQDRGINMHVVTEVQHIVILAEHRLLDYK
                     GVEKRFSQLRPLRYPRWLVAFMVGLSCSCFCKLNNGGWDGAVITFFASMIAMYIRQML
                     AQRHLHPQINFCITAFVATTISGLMLTLPAFSQTPTIAMAASVLLLVPGFPLINSVAD
                     MFKGHINTGLARWAIASLLTLATCVGVVMSMTIWGLRGWV"
     gene            6700..7425
                     /locus_tag="MOX77_003311"
     CDS             6700..7425
                     /locus_tag="MOX77_003311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HCA3358756.1"
                     /translation="MLPGCCKNGLIISKTPLIQEGLKGAITGNFPDYKLAYCRTIEEL
                     TLLQLRRSNLVIADLAVNNASPRAICEYFYSLISQYRDIHWVFLVPKSCYPHAVDLLM
                     GPVSTLLSDEEPIENLISVIHAGNARSERISKTLLSPQVPSEIQQSHDRPIVLTLSER
                     KVLRLLGKGWGINQIAALLKKSNKTISAQKNSAMRRLSIHSNAEMYAWINSSQGAREL
                     NLPSVYGETMEWKTESAREMLRS"
     gene            7386..8060
                     /gene="bglJ"
                     /locus_tag="MOX77_003312"
     CDS             7386..8060
                     /gene="bglJ"
                     /locus_tag="MOX77_003312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463407.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional activator BglJ"
                     /protein_id="HCA3358757.1"
                     /translation="MENRISKRNVALVEKCVMSTIGIKGLFDAMPDCRHTLHIFSKPS
                     AFYKAALKTPFSAVIFSLSALRTERRTGLSSLTELAINYPHMRRLVIADDDAEARLIS
                     ALSPLPLDGVISKASPLDVLQDALFTSLNSARRTTERTDNLWELHQNCMLSPTEREIL
                     RFMSNGYSMPQIAVQLERNIKTIRAHKFNVMSKLGVSSDAGLLDAADILLYLRAGDAT
                     ALQHRV"
     gene            complement(8111..8569)
                     /locus_tag="MOX77_003313"
     CDS             complement(8111..8569)
                     /locus_tag="MOX77_003313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaK/EbsC family protein"
                     /protein_id="HCA3358758.1"
                     /translation="MSLQSVRQFLAAHAPDIEIIELNQSTATVELAAKAHNVEPGQIA
                     KTLSLKVKDTIILVVAKGDARLDNKKLKTTFGAKARMLSSDEVVNATGHPVGGVCPFG
                     LEHPLPVYCDISLKGYNEVLPAAGATHSAVRITPERMAELTSATWVDVCQ"
     gene            complement(8720..9508)
                     /gene="fhuF"
                     /locus_tag="MOX77_003314"
     CDS             complement(8720..9508)
                     /gene="fhuF"
                     /locus_tag="MOX77_003314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore-iron reductase FhuF"
                     /protein_id="HCA3358759.1"
                     /translation="MAYRSAPIADDIIWRAAPQPEDASLADAVRETIASTRQHLLDFI
                     RLDETPPPTAMTLAQWTRPATFRSLLAAYSDHIYRHTPGLPRENKPLLSLWAQWYIGL
                     MTPPLMLALLTQARAINVSAEHIHVEFHETGRAACFWLDVHQDNLATERSPEERMETL
                     IVSALQPVIQALEATGDINAKLIWSNTGYLINWYLTEMKPLLGEALLATLRQRCFFEK
                     QLSDGQDNPLWRTVVMRDGLLVRRTCCQRYRLPDVQQCGDCTLK"
     gene            complement(9629..10693)
                     /locus_tag="MOX77_003315"
     CDS             complement(9629..10693)
                     /locus_tag="MOX77_003315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HCA3358760.1"
                     /translation="MTTPSWRSLRIKKYQFSLRLFLFLSAVSALFTLVFPLYQINVFC
                     TPMIGIVGLSVLLLIWHGKYGQKRINLPFISLLFGGIWAARIALKYPALGHYDFSFLL
                     ISLLSVLFIGSIAFAANIVAFTLYSLPPVAVCLWLNGNEQGLRILYLLALPMVGIAIQ
                     HVIQKRYDNFAQQLMFKLLAERETLNGLSMLDPLTGLYNRRGLQNRLDTLQAPGSHEH
                     YVLLLDIDHFKAYNDHYGHMMGDQALIRVSAAIRDAVRSRDVVCRFGGEEFLVLLTTA
                     EPQQARATAERIRQEVYDLKIPHMFNESVATNVTVSIGIAPLTDRNIGDAIEKADKAL
                     YEAKHLGRNHILVSDDMRAL"
     gene            10944..11180
                     /locus_tag="MOX77_003316"
     CDS             10944..11180
                     /locus_tag="MOX77_003316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1435 domain-containing protein"
                     /protein_id="HCA3358761.1"
                     /translation="MLQRTLGSGWGVLLPGVIIVGLAFIGLSAYALKLLIVSGLLLSA
                     LMLYHKQLRHFVLLPSCIALIGGMMLAMMNWNQG"
     gene            complement(11212..11298)
                     /locus_tag="MOX77_003317"
     tRNA            complement(11212..11298)
                     /locus_tag="MOX77_003317"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(11262..11264),aa:Leu,seq:cag)
     gene            complement(11330..11416)
                     /locus_tag="MOX77_003318"
     tRNA            complement(11330..11416)
                     /locus_tag="MOX77_003318"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(11380..11382),aa:Leu,seq:cag)
     gene            complement(11444..11530)
                     /locus_tag="MOX77_003319"
     tRNA            complement(11444..11530)
                     /locus_tag="MOX77_003319"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(11494..11496),aa:Leu,seq:cag)
     gene            complement(11721..>11982)
                     /locus_tag="MOX77_003320"
     CDS             complement(11721..>11982)
                     /locus_tag="MOX77_003320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HCA3358762.1"
                     /translation="EVKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELR
                     IVANAFLPYPKILDETFGFHEVIAQTGRFKVYRIVMTRQAKK"
BASE COUNT         2970 a         3017 c         3079 g         2916 t
ORIGIN      
        1 ttcaccagca acagcagcgt gcgcgtgaag tggcagcggt aaaaaccccg gcagccgtgt
       61 cgtcaccaaa ggccgctgtg gccgacggca gcgataattg ggaaacgttt taagggcgta
      121 gtggtgaaca gtcggcctac agacgaccgt aggccggatg agatgttcac acttttgcct
      181 gatggcgtag cgcttaccag gcctatgcgc cagtttattg ataaagatga tgtgtaggcc
      241 gggtaaggcg tagccgcacc cggcatatat gacattctct tttaactctc aacattcacc
      301 actttgatct ccaccatgcc aatccccaat ttgcgcggcg aatggcccaa aatattacct
      361 tcgttggtgg agacgggagc gggcggcgca atgactaagg tattcgcgtc cgtcgggttg
      421 ttgaaatgca gcgtgatagt ggacacatcg tgacccagca ccagcgtctg ttcttcgttg
      481 cctacgcgta ccggaatcgg ccgattcgcg ttgtcgccga aggctttggc ggtgatcacc
      541 agatcaaact ttttcggcag cggcgcttta tattcgattt taacctcatc gcccaactgc
      601 gcatttgacc agcgccccca ggactccggc cgggaaatgc cgctaaactg cttcacctcc
      661 tccggcgcgc ccgccacatt aaaaataaag ctatcggctt tataacgaat atcgttatcg
      721 acaatcttta aggtatcgac gttgcctttg tagcgctcca tatcgatcat cgtgtcttta
      781 aacgccgtct taccctgcca ctgcgcttta tcaacatgct gtacggtttg ctgcccgcca
      841 agctgtccct gcgagacgca ccagtcggta gagagcgcca gcgccggcgc ccatagctgc
      901 gccattttgt agcagcgatc gatccaaacg aaattatcgc gcggggcgaa gtcggccaac
      961 tggaaccgta gcggagcgga gtattcactt tccggtaacg gctcgacgcg cttatccgat
     1021 acgcgcagta gtaacggcag gcggaagtgg ctcccggaaa acgcgatcat gtttttgtcc
     1081 cgatcgacgg taaaatcttt tatctctttc gggaaattcc acaggcgaat gatatccggc
     1141 ttcatcgcca gcactttctc ttttacattc aggaacactt ccgacagcga ctgcccggaa
     1201 aggctgctac gtcccagacc gataaaatta tcgccgccga gaatatccag caccgttgcg
     1261 ccgttgtcca tcgtgttgcg tttgaccgcc agcgtctcct gctgcggttt atcgccgcgc
     1321 agaatgaaaa acagattgtt gcgatcttgc ttattcaggt atttccaggc cgtattgttc
     1381 atcgccagat ggtcggaaga gacgacgata acggtatctt taaaccacgg tgacgctttg
     1441 attttgttga taaactcggc gatgttttcc tggctgcaac ttacggtgct aaaggactgg
     1501 ttgggcttgc cgtcgtaatc gtagcgttta cggttgcagg tgcgtgagat aaacccgtcc
     1561 gggtggtgag tatctacggt cagcgtaaac agcgaaaaac gctggcctga gcgggaaagc
     1621 gcttcaaatt tcttccatgc ctcatcaagc accgtatcgt cgtagaagcc ccagtcgtta
     1681 cgataagacg ggtccgccac caccgttttt agctcttcag cgccgtacag atgatcaaat
     1741 ccgtgtgatt tcaggaacac gtctttcccg gcaaaacgca ggttagcgcc ctgcacgaaa
     1801 tagttctggt agccggagtt tttcagaata tcgccgaggc agatattctg cgggaagaag
     1861 ctggaaaccg acgcggacgc attgccctca aacggcgcaa acagcggaat accacactgg
     1921 gaagccacca tcccggcgat ggtgtaatcc gttcccggca gttgcatggt atggctgaaa
     1981 tccagcccct catttttcag cgcgcccaac tctggcgtga gattggggaa cgcgtcatta
     2041 tcaaaatagg tccgttccag gctctcgccg tagatataga ccagattgag cttcggatga
     2101 ggaatggttt ttgctggttc tttataataa acggcaaaat ccggatcgcc atcgcgcatt
     2161 tgtgatttta ccagttcggt aatctggcga aacgccgggc tggcgtcgac cgaacccaac
     2221 gccagcagta acgccagcag gctgtaaccg acatgatgag gatggtgacg gcggcggcgt
     2281 agtacccatc ccagcgcgcc gaataccgcc actaacgcca gggcaatgcc gattcccggc
     2341 agaatatatt tgccgactcc cgctcccgtc agactattcg tgagcgtata aagcactgcg
     2401 tcgttgatcc cgtcgccggt aaaatagtcg ctggcataca gggtaatatt cagaatgaca
     2461 aaaagtccca gcaccgtgag agtggcggca aaccaccaag tgttacggcc cgccttccag
     2521 gcatatatca gcacagaggc gagaaacaga gcgacagaga gcaactcgga caactgacga
     2581 tcctcaataa accaggctta tcgctggcag gaaaaaattt ctaacaatgt aatagcgatg
     2641 tcacattgct gcaattctaa taactttaca cggcgctgtt atttagaatg agtttagaaa
     2701 gttggttttt tgatcggcat cacttcctgc catagcggtt aataacagga aaagacgaag
     2761 agaaaagtcg ggttaatgcc gtgttggcgg gtaaagggcc aaaacacggc ttttaacagg
     2821 gcgtcccggc gtggcgcacg gtcagaaaag cgcagtcagg agaggaaatt cagcccttgc
     2881 tgcaacacca gatcgcaagc tttggttttc accttttccg ccagcggcgt actgccgata
     2941 ttattgaggt tcaattgctg gccgtccttc gtcttgagca acccttgcag gccgttcagg
     3001 tagttagtgt cctgctcctg ctgtgtggta tccaacccta acttgttcag aatctgattt
     3061 ttaacgtttt ccacgttggt agcggacgcc agtttctgtt tggcgcagta ctgcaaaata
     3121 ccggcggcat tattcatatt atcagcactg agcgactggg cacctctgct gagcagaccg
     3181 gttagcgcag aaagcgacat cccgccctgc tgtgcgttcg cgccctgagc gcttaactga
     3241 ctggcggcaa taccgctggt ggaaatcagt acgctggcga tcgccgcgca gcacagaaca
     3301 tgtttcgctg tattcatggt aatcacctgt gttatgccag ctaggcgtcg tatcgccctg
     3361 gcgcacgttg caatttaata ctctttaccc gtcactcggc tgcggtaact gtcccagcta
     3421 aaattaaccc ataaactgtt gccgagacgc atacggtcca tgacgcgttc gccaagcatt
     3481 ttcgtcatct cttccatatt gctgttcgtc aacatgccgg tgggacgttt tgacgaggaa
     3541 cgacgatcga caatttgatt gatgatcact ttttcatagc gggattcggt ctgcacgccg
     3601 atctcgtcga tcaccagcag atcaacgtta ctcagatcgt taagcaactg ctcttcgctg
     3661 gtttcccgat tgctgaacgt gtctttcatc gctgacataa tatccgctac ggtgataatc
     3721 agtaccgact ttccgcgcag cagcagctcg ttacaaatag ccgcggcgag atggttttta
     3781 ccggttcccg gcttgccgga aaagacaaag ctggcgatat tgccgtcaaa ttcatccacg
     3841 tactgtcggg ctttgcttaa cgcgttcatt tgtccgtcgc actcaacccg atagttatca
     3901 aacgagcagt tttgatgcag cggtcgaatg ccggaacggt taaaggtgcg ctgcattttc
     3961 atcgcccgat tttcccgcgc cagcgctgcc gcccggatct cgccctgctc tttctgccag
     4021 gccagcagtt cttcgcccgt tttaaacgcc ggcgtaatat gcgcaggcat cattttttgt
     4081 agacgctgca tcaggtcgcc aacatttttc atcgttaccc cctaaaacct ggtggaatat
     4141 gattgtcagg ttcgctgacg ctattgatgt cgcgctgcgg cattccgcca ttgctggaac
     4201 ggctgatttg cacgctgcgc gccagctttt gctgccactg gatatggtga aaaaccttac
     4261 cttccgcctg ccagtaggcg ataaacgccg ctagctcttc tgcggtgaca ggctcccgaa
     4321 gcgccacgcc ccaaagggca gcctgacgct gaaaatccgc atccggttgc caggcgggat
     4381 acatggcgaa ttttccgcag ggaatcgcaa cgggggcggc ttcgggttct tcgtaaaatt
     4441 gcgcgtctaa cgccacatcg cttcccggac gtgataactt ttcttcaagc gccagcagtt
     4501 cagccatgcg tgcaggcgtc acggcataaa aggcaggcgc attattagcg aataccgcca
     4561 ctgcgccgcc cgttgacttc gccagcacag catgatgatc gtgtaaaagg acgtcaatac
     4621 cgatgacgtc cgacgttaaa attctggaag acataatgtt tctcaatatg gaacaacaac
     4681 cgagaagggc gactgttttt atagtaccac acagacctgt aagaacagca ggaggcgttc
     4741 caccgatcac acgcgggggc gtttgcggta cagccataat cccggtacag agaggccaat
     4801 tgagagcgcg ccaacaatgg aagaggcttt cagaaaattg gtcagcagcg taatcatcat
     4861 cggttcgcta tagcccagat ggctaatttt tactgcggaa atcatcgcgg tataggcgga
     4921 aatccccgga aacatcggga tcacggccgc gacggtaaac actttagggt gagcgagata
     4981 ccagcgtgac cactgaatac caatactgcc gaccagcagc gaagccataa acgtcgacca
     5041 ttcgatatta aagcctgcgc tcatcatcag catacgcaag ccatgaccca gcgcccccag
     5101 tagcgcgcac cacggaagcg cccggtgggg aacattaaag accatcgcaa acccgacggc
     5161 ggggatcgca gacaagatca tgtcctgcat tagcgccagt aaaaagtcga ttatacccat
     5221 cctcgtagcc cccatattgt cattgacatc actacgccca cacaggtggc cagtgtcaac
     5281 aggctggcga tagcccagcg cgccagcccg gtattaatat gtcctttaaa catatctgcg
     5341 acggaattaa tcagcggaaa gcccggcacc agtagcagta cgctcgccgc catggcgata
     5401 gtgggcgtct ggctaaaggc gggaagggtg agcatcagcc cggaaatcgt ggtagcgaca
     5461 aaggcggtaa tgcaaaaatt gatctgcgga tgtaaatgcc gctgcgccag catctggcgg
     5521 atatacatgg ctatcatact ggcgaaaaag gtgataaccg cgccatccca gccgccatta
     5581 ttcagcttac aaaagcagga gcaggaaaga ccgaccataa acgccaccag ccagcgcgga
     5641 taacgcagcg ggcggagctg gctaaagcgt ttttccacgc ctttgtaatc cagcagacga
     5701 tgttccgcga ggataacgat atgctgaacc tccgtgacga cgtgcatatt aatgccgcga
     5761 tcctggtttt tacgtgtcga tgtcagacat tgtccgtctt taatggtcgt caggacaatg
     5821 gcgttagagg agatcgcgct ttcgacgcta tctataccga gcgccaaacc gaggcgggtg
     5881 gaaagctcat caaccagtgc gctttccgcc ccgtgctgca ataaaagcag cccgcattga
     5941 atacataacc gtgttactgc tcgttgaatt gattgctctt cttgcatgac tcgtcctgtc
     6001 cgaaaagaca ttctatgcgc cgccactatg acagaggctt tctttttaac acgaagcgca
     6061 ggcatgatgg cgttggttaa gatcaatttc ttgttgataa aaacgtcaac caccagacgc
     6121 aacgcataag cttcctgaga cgtgcgcttc gtcacaggca ggatatcctt atgggcgacg
     6181 gttctcgtat gtccgtttcc agaatagagg cattatgcca gtctggccgc tcatttttga
     6241 atcaatgatg tggtgaattt tatcaactat atgcattaat ggtttaacca caatggcgtg
     6301 agcagcgggt gtaaaaatag gcatgactta gtgtaattcg tagatattac atgggtttta
     6361 tggatggtgg acagtattgt tgggcttttg ttttaggact cagcaatatg aatgaagggc
     6421 gaactcatat tttaaattta ttaatatgat gcgttttcgt tagaattgct aatgtgcaaa
     6481 tttagttaat ttaattgtct tgcttctggt tttatgagta actatgcgat agtgatttca
     6541 tgtttttgtg ctatgtggat tgtagcgcaa tcaatgttag atatttaaaa ataaaacaag
     6601 gataattaat ccactcggcc tatatttctt tgcgatcatt gttaatagtg tttttattaa
     6661 tggggcaatg aaaagtggcg gcgtgggtgc ggaggaatta tgctgccagg atgctgcaaa
     6721 aatggactta ttatcagtaa aacccctctt atacaggaag gccttaaagg ggctataaca
     6781 ggtaatttcc ccgattataa actggcgtat tgtcgtacga tagaagagct aacgctgcta
     6841 cagctacgcc gaagtaattt agttattgct gatttagcag ttaacaatgc ctctccccgc
     6901 gctatctgcg aatattttta tagcttaatc tcgcaatatc gcgacataca ttgggtattt
     6961 ctggttccta aatcctgcta tccacatgcg gttgatctcc tgatgggccc cgtcagcacc
     7021 ttgctttcag acgaagagcc aatcgagaat cttattagcg ttatccatgc gggaaacgct
     7081 cgctcagaaa gaataagtaa aacgttatta tcgcctcagg taccgtctga aattcagcag
     7141 tcccacgaca ggccgattgt ccttacgctg tctgaacgaa aagtattacg ccttttagga
     7201 aaagggtggg gcattaacca aattgcggcg ttacttaaaa aaagtaataa aacaattagc
     7261 gcccaaaaaa atagcgccat gcgacgctta tcaatacaca gtaatgcaga gatgtatgca
     7321 tggataaaca gttctcaggg agccagagaa ttgaacctac cttcggtata tggagaaacc
     7381 atggaatgga aaacagaatc agcaagagaa atgttgcgct cgtagaaaaa tgcgtgatga
     7441 gcaccattgg tattaaaggg ctatttgatg caatgccgga ttgccgacat acgcttcata
     7501 ttttttcaaa accatccgcg ttttataagg ctgcgctaaa gacgccgttt tctgccgtta
     7561 ttttttctct ttctgcgtta agaactgaac gccggacagg attatccagc ctgacggaac
     7621 tggcgataaa ttatccccat atgcggcgtc tggtgattgc cgatgatgat gctgaagccc
     7681 gcttaatcag cgcattatcc ccgctgccgc tggatggggt catcagcaaa gcgtcgccgt
     7741 tggatgtttt acaggatgcc ttatttacat cgcttaatag cgcccggcgg acaacggagc
     7801 gtacagacaa tctttgggaa cttcaccaga attgtatgct tagtccaacc gagcgggaga
     7861 ttctgcgttt catgtcgaac ggctactcaa tgccgcaaat tgccgtccag ttagaacgta
     7921 acattaagac tatccgggcg cataagttta atgtgatgtc caagctgggc gtgagttctg
     7981 atgccgggtt actcgatgcg gcggatattc tgttatatct gcgcgccgga gatgctaccg
     8041 cgctccagca tcgggtatag cccgcgccgg atgcgccgtg cttgttcggg gaatccgggt
     8101 gtcaggcacg ttattggcac acgtctaccc aggtcgccga tgtcagttca gccattcttt
     8161 ccggcgtgat gcgtaccgcg ctgtgcgtgg cgcctgcggc aggcaatact tcgttatacc
     8221 ccttcagaga gatgtcgcaa taaacgggca gcgggtgctc cagcccgaaa ggacatacgc
     8281 cgccgacagg atgtccggtt gcattgacca cttcatcgct gctcaacata cgggcttttg
     8341 cgccgaaagt ggttttaagc ttcttattat ccaggcgggc atcgcctttc gcgaccacca
     8401 ggataatggt gtcttttact ttaagcgaga gcgtcttagc tatctgccct ggctctacgt
     8461 tgtgcgcttt ggctgccagt tcgacagtcg ctgtactttg atttaattcg ataatttcaa
     8521 tatcgggagc atgagcggcc agaaattgcc gtacagattg cagactcatt cttctctcct
     8581 gagaccttac caatagccac ggtagaccca aaaatggcaa aacgtaattt ggcatacgga
     8641 gagcgccgct gtaaatataa taatgtgaca ggccagcagc agtaagccgt gacgataact
     8701 gaaggcaacg taaagcggtt tactttagcg tgcagtcgcc gcactgctgt acgtcaggta
     8761 agcggtaacg ttggcagcag gttctgcgta ccagaagacc gtcgcgcatt acgacggtcc
     8821 gccacagcgg gttatcctga ccgtcggata gctgcttttc aaaaaaacag cgctggcgta
     8881 gcgttgccag cagggcttcg ccaagcagcg gtttcatctc agtcagatac cagttgatta
     8941 aataaccggt attgctccag ataagtttcg cgttgatgtc gccagtcgcc tccagcgcct
     9001 gaatgaccgg ctgtagtgcg gagactatta gcgtttccat tcgttcttcc ggggaacgtt
     9061 ccgttgccag gttatcctga tgcacatcaa gccagaaaca cgcggcgcgc ccggtttcat
     9121 gaaattcaac gtgaatatgt tctgccgaga cattgatagc gcgcgcttgc gtcagtaatg
     9181 ccagcatcag cggcggcgtc atcagcccga tataccattg cgcccacagg gagagtaacg
     9241 gcttattttc acgtggcagg cctggcgtgt gccgatagat gtgatcggaa taggcggcca
     9301 gcaatgaacg aaacgtcgcg gggcgcgtcc actgggcaag agtcatcgcc gttggcggcg
     9361 gcgtttcatc cagccggatg aagtccaaca ggtgctgacg ggtagaggcg atcgtctcgc
     9421 gtactgcgtc cgccagcgag gcgtcttccg gctggggagc agctcgccag ataatatcgt
     9481 cagcaatcgg tgcggaacgg taggccatag cgcagtttaa tgatgttaat ctaaatgata
     9541 atgattgcta atcctatcga tagcgataaa cgatggcaag cggtttatgg ttaacgctgt
     9601 tggcgtagca cgattacgcc aacaggattc atagggcgcg catgtcgtcg ctgaccagaa
     9661 tgtggttacg tccaagatgc ttggcttcgt agagcgcttt atccgctttt tcgatagcgt
     9721 ctccgatatt gcgatccgtc aagggcgcaa tgccgatact gacagtgaca ttggtggcga
     9781 cgctttcgtt aaacatatgc gggattttaa gatcgtatac ttcctgtcgg atacgttctg
     9841 cggtagcgcg ggcttgctgt ggttcggcgg tggtcagcaa caccagaaat tcttccccgc
     9901 caaaacgaca gacgacatcg cgcgatcgca cggcgtcccg aattgccgct gagacgcgga
     9961 ttaacgcctg atcgcccatc atatgaccgt agtgatcgtt atacgctttg aaatgatcga
    10021 tatccaatag caggacgtag tgttcatggc tgcccggcgc ctgtaacgta tccagccgat
    10081 tttgcaggcc acggcggtta tataagccgg ttaatggatc aagcatactc aggccattga
    10141 gggtttcccg ctcggccagc agcttaaaca tgagctgttg ggcaaaatta tcgtagcgtt
    10201 tctggataac atgttgaata gcgattccca ccattggcag ggccagcaaa tagagaattc
    10261 gcaaaccttg ttcattaccg ttcaaccaca ggcagaccgc gactggcggt agcgaataga
    10321 gcgtaaacgc gacgatattc gcggcaaagg ctatcgagcc gataaacaga acgctaagca
    10381 gggagatcag taaaaaagag aaatcataat ggcctaacgc cggatacttt agcgcaatac
    10441 gcgccgccca tattccccca aagagtaggg agataaaggg gaggttaatt cttttttgcc
    10501 catatttccc atgccatatc aacagtaata cgctcaggcc cactatcccg atcattggcg
    10561 tgcaaaatac attgatctga taaaggggga aaacgagagt aaatagcgcc gacacggcgc
    10621 tgagaaacaa gaaaagacgt aaagaaaact gatacttctt aatacgaagc gatcgccagg
    10681 atggtgttgt catgggtaat tgtcgttatt tatcagtgat atacacggaa tcgggcgcca
    10741 acatgaaaat aacgtatgag aaaaggtcgc ctaaagcgag gtgttgttgt ttttacgtta
    10801 acagtcggac aatttatcac cttactgaat acgtgtcatc aaccgttaag taaaactcat
    10861 ctctttagct ttctccctgg ctgacaaatg agaaaatata tcatatgata ttggttatca
    10921 ttatcaattc cagaggtgaa accatgttgc agcggacgtt aggcagcgga tggggcgtgt
    10981 tattgcctgg agtgattatc gttggactgg cgtttatcgg cctgtcagct tatgcgctga
    11041 agctgttgat tgtatcagga ttgctactgt ctgcgctgat gttgtatcac aaacaattac
    11101 ggcattttgt actgctgcca tcgtgtatag cgcttattgg cggcatgatg ttggcaatga
    11161 tgaactggaa tcagggatga aaatgaaggg acaaaggaag gataagataa ttggtgcgag
    11221 gggggggact tgaaccccca cgtccgtaag gacactaaca cctgaagcta gcgcgtctac
    11281 caattccgcc accttcgcac agttatctta ctttttgata tcgcctcgtt ggtgcgaggg
    11341 gggggacttg aacccccacg tccgtaagaa cactaacacc tgaagctagc gcgtctacca
    11401 attccgccac cttcgcccag tgcgagcaat atcaacatgg ttttggtgcg agggggggga
    11461 cttgaacccc cacgtccgta aggacactaa cacctgaagc tagcgcgtct accaattccg
    11521 ccaccttcgc ataccatcga ttcttgaaaa gaatcactac cacggaggcg cattctagtg
    11581 gttttcagct attcgtcaat agttaattgc atgggataga ttgattgctg caaaaatggg
    11641 cgcgagacgt aggttggata agacgcctgg cgtcgccatc cggcacatgc aaccagatgg
    11701 cgctgcgctt atcaggccaa ctatttcttc gcctgacggg tcatcacgat acgataaacc
    11761 ttaaagcgcc cggtttgcgc gatgacttca tggaagccaa aggtctcatc cagaatctta
    11821 ggatagggca gaaaggcgtt cgccacgatg cgtaactctc cgccgctgtt cagatggcgc
    11881 actgcgccgc gaatgagcgt ttgcgccgca tcaaggctgg tttgcattcc gtcgtggaac
    11941 ggcgggttgg agatgatcat gtcaaaacgt cctttgactt cc
//
LOCUS       DAGWFR010000123        11841 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.125, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000123 DAGWFR010000000
VERSION     DAGWFR010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 11841)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11841)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11841
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.125"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..235)
                     /locus_tag="MOX77_003321"
     CDS             complement(<1..235)
                     /locus_tag="MOX77_003321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358763.1"
                     /translation="MTTQVRKNVMDMFIDGARRGFTIATTNLLPNVVMAFVIIQALKI
                     TGLLDWVGHICQPVMALWGLPGEAATVLLASLMS"
     gene            complement(232..903)
                     /locus_tag="MOX77_003322"
     CDS             complement(232..903)
                     /locus_tag="MOX77_003322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000068748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjiH family protein"
                     /protein_id="HCA3358764.1"
                     /translation="MAQQVDGAAMPLDTEKVGIKGYLAFFLTIIFFSGVFSGSEGWWR
                     VFDFTVLNGSFGHVTGTQTFRGAGGTGAKDGFLFALELAPSVILSLGIIAITDGLGGL
                     RAAQQLMTPILKPLLGIPGICSLALIANLQNTDAAAGMTKELAQEGEITERDKVIFAA
                     WQTSGSAIITNYFSSGVAVFAFLGTSVIIPLVVILLFKFIGANLLRIWINIEERRHPA
                     QGAQS"
     gene            complement(1702..2886)
                     /locus_tag="MOX77_003323"
     CDS             complement(1702..2886)
                     /locus_tag="MOX77_003323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3358765.1"
                     /translation="MVHAQSASPRHPIFTALFGMMVLTLGMGVGRFLYTPMLPVMLAE
                     KQLTFNQLSWIASANYAGYLAGSLLFSFGLFHLPSRLRPMLLASAVATGILILSMAIF
                     TQPAVVMLVRFLAGVASAGMMIFGSMIVLHHTRHPFVIAALFSGVGAGIALGNEYVIG
                     GLHYALSAHSLWLGAGALAGILLLIVAMLIPPRAHALPPAPLARIENQPMSWWQLALL
                     YGFAGFGYIIVATYLPLMAKSAGSPLLTAHLWSLVGLAIIPGCFGWLWAAKHWGVLPC
                     LTANLLIQSACVLLSLASDSLLLLILSSIGFGATFMGTTSLVMPLARQLSAPGNINLL
                     GLVTLTYGIGQILGPLAASLSGNGASAIINATLCGAAALFFAALISTAQQIKQKRFVI
                     RE"
     gene            complement(3106..4377)
                     /locus_tag="MOX77_003324"
     CDS             complement(3106..4377)
                     /locus_tag="MOX77_003324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF445 domain-containing protein"
                     /protein_id="HCA3358766.1"
                     /translation="MNKIAELKRAKRLALSLLLIAAATFVTTLFLPPSFWVLSVKAIA
                     EAAMVGALADWFAVVALFRRIPIPFISRHTAIIPRNKDRIGENLGQFVQEKFLDTQSL
                     IALIRRHEPALLIGNWFSQPDNASRVGQHLLQIMSGFLELTDDARIQRLLKRAVHKAI
                     DKVDLSGTSALMLESMTKNDRHQVLLDTLIAQLIALLQRDSSRTFIARQIIRWLETEH
                     PLKAKILPTEWLGEHSAELVSDAVNSLLDDISHDRAHQIRHAFDRATYKLIDKLKHDP
                     EMAARAENIKSYLKEDEAFNRYLGEIWADLRQWLKTDINAEDSKVKQRIAHAGQWFGE
                     TLIADDALRASLNGHLEQAAHRVAPEFAAFLTRHISDTVKGWDARDMSQQIELNIGKD
                     LQFIRVNGTLVGGAIGLVLYLLSQIPALLSI"
     gene            complement(4464..5705)
                     /gene="mdtM"
                     /locus_tag="MOX77_003325"
     CDS             complement(4464..5705)
                     /gene="mdtM"
                     /locus_tag="MOX77_003325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter MdtM"
                     /protein_id="HCA3358767.1"
                     /translation="MQRIIQFFSQRATTLFFPMALILYDFAAYLTTDLIQPGIINVVR
                     DFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLIAGALIFTLACAATLLTT
                     SMTQFLVARFVQGTSICFIATVGYVTVQEAFGQTKAIKLMAIITSIVLVAPVIGPLSG
                     AALMHFVHWKVLFGIIAVMGLLALCGLLLAMPETVQRGAVPFSAVSVLRDFRNVFRNP
                     IFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMSTSQFAWAQVPVFGAVIVANMIVVR
                     LVKDPTRPRFIWRAVPIQLSGLATLLLGNLLLPHVWLWSVLGTSLYAFGIGMIFPTLF
                     RFTLFSNNLPKGTVSASLNMVILTVMAVSVEVGRWLWFHGGRLPFHLLAAVAGVIVVF
                     TLATLLQRVRQHEAAELAAEK"
     gene            6184..7149
                     /locus_tag="MOX77_003326"
     CDS             6184..7149
                     /locus_tag="MOX77_003326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012548938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rpn family recombination-promoting
                     nuclease/putative transposase"
                     /protein_id="HCA3358768.1"
                     /translation="MKKSTTSTPHDAVFKTFLRHPETARDFMEIHLPVSLRQLCDLRT
                     LKLEPGSFIEKNLRAYYSDVLWSLKTREGDGYIYVVIEHQSTPDAHMAFRLMRYAMAA
                     IQQHLDAGHKHLPLVVPMLFYHGVDSPYPFSLCWLDEFANPEVARRLYAAAFPLVDIT
                     VVSDDDIMQHRRIALLELIQKHIRQRDLLGLVERIASLLVTGCANDRQLKALFNYLMI
                     QHGHTPRFTTFIRDVVGHVPHTKERLMTLIERIRAADRRKGERQGRQLGLEEGLAEGL
                     EKGLEKGQHVAALRIARQMLADGLDRETVQRFTGLTAEELQDVSH"
     gene            7330..8701
                     /locus_tag="MOX77_003327"
                     /pseudo
     CDS             7330..8701
                     /locus_tag="MOX77_003327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463378.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
     gene            complement(8797..8940)
                     /locus_tag="MOX77_003328"
     CDS             complement(8797..8940)
                     /locus_tag="MOX77_003328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358769.1"
                     /translation="MVVWGGSRKIPYQPPHRTENAGIMNVCTNNTGIKSTVSATWINK
                     EGD"
     gene            8907..9071
                     /locus_tag="MOX77_003329"
     CDS             8907..9071
                     /locus_tag="MOX77_003329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1127 domain-containing protein"
                     /protein_id="HCA3358770.1"
                     /translation="MEFYENRPRQPFIGYVQLRRALKRWWLRKRACQALRRMSDEQLR
                     DIGLERKDVE"
     gene            complement(9146..9847)
                     /locus_tag="MOX77_003330"
     CDS             complement(9146..9847)
                     /locus_tag="MOX77_003330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358771.1"
                     /translation="MRLKVKENITLWRNEGLIAYVALGFLCTFFMEVNALLPYYLQQS
                     IFFETLMSYMAFNTLFSLALSEIFFAMLVVICHNTKLERLTNSILQELHKRIMQGSFI
                     ISFLCFGIFLFCVMAFCIGSLTTNNNYYGKHVINFAYPFVLFLSFPYLIHKGITILCT
                     ILKAFPKGKIHAAIIILLIIAAAIIIPGIFNKKEKMTITIDKEKYHAIEQKTKIKPEK
                     YIEKKINDININDIK"
     gene            complement(9921..10253)
                     /gene="symE"
                     /locus_tag="MOX77_003331"
     CDS             complement(9921..10253)
                     /gene="symE"
                     /locus_tag="MOX77_003331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endoribonuclease SymE"
                     /protein_id="HCA3358772.1"
                     /translation="MTTVHSIADPCDPEVSPTNNRHLTVSYASRYPDYTRIPALTMKG
                     QWLEAAGFATGTEVDVRVMNGCIVLTAQQPQPEESELMQSLRQACKLSARKQKQVQAF
                     ISVMAGSK"
     gene            complement(10481..11839)
                     /gene="hsdS"
                     /locus_tag="MOX77_003332"
     CDS             complement(10481..11839)
                     /gene="hsdS"
                     /locus_tag="MOX77_003332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001682542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction-modification system
                     specificity subunit"
                     /protein_id="HCA3358773.1"
                     /translation="MTTHLSEICSKPQYGYTTKSSSMGDVKFLRTTDITKGAVDWSSV
                     PYCMDAPEDVSKYQLQDRDIVISRAGSVGFSFLVQNPPSQVVFASYLIRFKPVNYFSE
                     YYLKRFLESSDYWNQLSLMSAGNAVQNVNAQKLSTLTVPIPPIAEQKIIAEKLDTLLA
                     QVDSTKARLEQIPQILKRFRQAVLAAAVSGLLIGSNKRNHHPLCSEWQWPDLPSTWSV
                     HKYSELVDSRLGKMLDKAKNFGSATKYLGNINVRWFSFDLENLQDILISDIERRELSL
                     KLGDVLICEGGEPGRCAIWSEPQDIPVIFQKALHRARVKDKIIPEWLVYNLKNDSNNI
                     SLSQLFTGTTIKHLTGKALANYPIRVPPLEEQHEIVRRVEQLFAWADTIEKQVNNALN
                     RVNSLTQSILAKAFRGELTAQWRAENPSLISGENSAAALLEKIKAERAASGGKKTSRK
                     KA"
BASE COUNT         3120 a         2858 c         3101 g         2762 t
ORIGIN      
        1 tactcatcag cgaagccaga agcaccgtag ccgcttcgcc gggaagcccc cacaacgcca
       61 tcacgggctg gcagatatgg cctacccagt cgagcagacc ggtaattttc agcgcctgaa
      121 taatgacaaa tgccatgacc acattgggta acaggttggt cgtggcgatg gtaaaaccgc
      181 ggcgtgcgcc atcgataaac atatccatga cattcttacg tacctgagtc gtcatgattg
      241 ggctccttgc gcagggtgac ggcgttcttc gatgttaatc cagatgcgca aaaggtttgc
      301 gccgataaat ttgaatagca gaatgaccac cagcggaatg atgactgacg ttcccagaaa
      361 ggcgaatacc gcaacgccgg aggagaaata gttggtgata atagcgctgc cgctggtctg
      421 ccaggcggca aaaatcactt tatcgcgttc ggtgatttcg ccttcctgcg ccagctcttt
      481 ggtcataccc gccgcggcgt cggtattttg caggttggcg atcagcgcca gtgagcaaat
      541 gccgggaatg ccaagcaatg gtttcaggat gggcgtcatc aattgctgtg ccgcccgcag
      601 accgccaagc ccatccgtaa tcgcgatgat acccagagaa aggataaccg acggcgccag
      661 ctccagcgca aaaaggaagc catctttcgc gcccgttccg cccgcgccgc gaaaggtctg
      721 cgtaccggtc acatgaccga atgacccgtt gagtacggta aaatcaaaaa cgcgccacca
      781 gccttcgctt ccggaaaata cgccggaaaa gaaaataatg gtgagaaaaa acgccaggta
      841 tccctttatc ccgacctttt ctgtatcaag cggcatggcc gccccgtcca cttgttgcgc
      901 catagcgatc cccgaatttt tttgatgatg tgttggttgt agccacaggc caaaaagccc
      961 gaaacagaaa gaccttatca gccataaggg taaggacaaa atgcaagtat gtatcgtgct
     1021 atgcgtttct tgcatagcag cgcgaaaaat caccatcctc gctactgccg gaggcgcggg
     1081 gaaccgtgga cggtataacg cgcggtaaaa aagcaaagaa acaggtgttg acgcaggcca
     1141 gagccgggag caggaaaaag gggaaataaa tttgacgtta gtcaatttca cgccttaaga
     1201 ggaattgtca cggtcaggtc agtagccgct gatgggtcag cttgcgccct aagaatccta
     1261 cgggcaggta ataaaaaacg aataatcgaa ttaatttcat gatgtgattt atttataatt
     1321 gtgatgattt gagagggagc gataatcatc ataatggaat atatagccaa aataattcga
     1381 gttgcgtaaa ggcggcaagg gagtgagtcc ccaggagcat aataacgatg tgactggggt
     1441 gagcaacggc ccgtcagggc gaggcccatg gatgggccgg gtaatccgta gccaacacat
     1501 aagccacttg aagtaggaag ggtatataaa ataatagaca gattgataac actaaaaacc
     1561 atagaataag tatagttttt agtggcatct ttaccttgaa ataacgtgtt gaggatgtgc
     1621 tattaaaaac agatccgcat tgcgccgcga atagcattaa agatacaacc cggtgcggat
     1681 agcgcgggtt tactctaccg cttattcacg tatcacaaac cgtttttgtt ttatctgctg
     1741 cgcggtgctg atcagcgcgg caaaaaagag cgccgcggcg ccgcaaagcg tggcgttgat
     1801 aattgccgac gcgccattgc ctgacagact ggcggcgagc ggaccgagaa tttgcccaat
     1861 accatacgtt agcgtcacca ggcctaacaa attaatattg cccggcgcgc tgagctggcg
     1921 ggcaagcggc atcaccagtg aggttgtgcc cataaacgtg gcgccaaaac caatactgct
     1981 cagtattaac agcaacaacg agtcgctggc gagagacagc agcacgcagg cgctctggat
     2041 caacaggttc gcggtcagac atggcaggac gccccaatgt tttgccgccc acagccagcc
     2101 gaagcagccg ggaatgatcg ccaggccgac caacgaccaa aggtgtgccg tgagtagcgg
     2161 agagcccgcg cttttcgcca tcagcggcaa ataggtagcg acaatgatgt agccgaatcc
     2221 ggcgaaaccg tataacagcg ccagttgcca ccaggacata ggctgatttt cgattcttgc
     2281 taagggcgca ggcggcagcg catgagcgcg ggggggaatc aacattgcca cgattaatag
     2341 caatataccg gcgagcgctc cggcccccag ccatagcgaa tgggccgaaa gcgcataatg
     2401 taaaccgcca atgacatatt cgttgcccag tgcaatcccg gccccgacgc cggaaaagag
     2461 cgcggcgatc acaaacggat ggcgggtatg atgcaacaca atcattgatc caaaaatcat
     2521 cattcccgca ctcgcgacgc ctgccaggaa gcgcaccaac atgacgaccg cgggctgagt
     2581 aaatatcgcc atagacagaa taagaatacc ggtggcgacc gccgaagcca gcagcatggg
     2641 gcgtagacga gaggggagat gaaaaaggcc aaaggaaaac agtaagcttc ccgccaggta
     2701 ccctgcataa ttggcgctgg caatccagga gagttggtta aacgttagct gcttttccgc
     2761 cagcattacc ggcagcatgg gcgtatacag aaagcggcca actcccatcc ccagcgtcaa
     2821 taccatcata ccgaaaagcg ccgtaaaaat gggatggcga ggtgaagcgc tctgagcatg
     2881 aaccatggtt tttctctttg ctaaagtaag gcaggaatgc cggattgtcg ttgtaaatga
     2941 taataaaaag taaaattaat gtttcaaatt tgcaagaaaa gaaagtgaag cgcaggcgaa
     3001 taacggattg agaagagggg catcggtggg aaatggcatt aaattaatgc ctcccacgtg
     3061 cggggtttgg cagttaatct gaatgagaat tgcgccttcc ccttcttaga tactgagcag
     3121 tgccggtatt tgcgacagta aatataacac cagaccaata gcgccgccga ccagcgtgcc
     3181 gttcacgcgg ataaactgca aatctttacc gatattaagc tcaatctgct gcgacatatc
     3241 gcgcgcatcc cagcctttta cggtatcgct gatgtggcgc gtcaggaagg cggcgaattc
     3301 cggcgcgacg cggtgcgcgg cctgttccag atgaccgtta agcgaggcgc gtaatgcgtc
     3361 gtcggcgatc agcgtctcgc caaaccattg tccggcatga gcgatgcgct gcttcacctt
     3421 tgagtcttcg gcgttgatat ctgtttttaa ccactggcgc agatccgccc agatctcgcc
     3481 gagatagcgg ttaaacgcct catcttcctt cagataactt ttaatatttt ctgcccgggc
     3541 agccatttcc ggatcatgtt taagcttatc gatcagctta tacgtcgcac gatcgaaggc
     3601 atgacgaatc tgatgtgcgc ggtcgtgact gatatcatcc agcagagaat tcaccgcgtc
     3661 ggagaccagt tcagcgctgt gttctcccag ccattcggtc ggcagaatct tcgcttttaa
     3721 cggatgctcg gtttccagcc agcgtatgat ctgtctggcg ataaatgttc gggagctgtc
     3781 acgttgtaac agggcgataa gctgggcgat cagcgtatcg agtaacacct ggtgacgatc
     3841 gtttttggtc atgctttcca gcatcagggc gctggtgccg gaaagatcca ctttatcaat
     3901 cgccttatgt accgctcgct tgagcagccg ctgaatacgg gcgtcatcgg ttagttccag
     3961 aaagccgctc ataatttgca gcagatgctg cccgacccgg ctggcgttgt ccggctggct
     4021 gaaccagttt ccaataagca gcgcgggttc atggcggcgg attagcgcga tcagcgactg
     4081 cgtatcaagg aacttctcct gtacaaattg cccaagattt tcgccgattc ggtctttgtt
     4141 acggggaata atcgccgtat gtcgtgaaat aaacggaatg ggaatgcggc gaaacagcgc
     4201 caccacggca aaccagtccg ccagcgcgcc aaccatcgcc gcttcggcaa tagcttttac
     4261 gctcagcacc caaaaactgg gcggcaggaa aagcgtggtc acaaacgtcg cggcggctat
     4321 cagcaacagt gagagcgcca ggcgtttggc gcgtttgagt tcggcgattt tattcatagg
     4381 gttaaggata gagccagacg gcaggaacgt gcaaaaaata tcagatgatc ctgtgccgga
     4441 taagcctcta tccggcagag tgtttacttc tcagcggcca gttctgccgc ctcatgctgg
     4501 cgcacgcgct gtaataatgt cgccagggtg aagaccacaa tcaccccggc caccgctgcc
     4561 agcaggtgaa acggcagtct cccgccgtga aaccacagcc agcggccaac ttcgaccgac
     4621 accgccatca ccgtcagaat caccatgttc agcgaggccg aaaccgtccc ttttggcaag
     4681 ttgttggaga aaagcgtgaa gcgaaacagc gtcgggaaaa tcattccaat gccgaacgcg
     4741 tacaggctgg tgcccagcac agaccaaagc cagacgtgcg gcagaagaag attaccgaga
     4801 agcaatgtcg ccagcccgct taactggatt ggtacggcgc gccagataaa acgcggtcgg
     4861 gttggatctt tcaccaggcg cacaacgatc atattggcca cgatcaccgc gccgaatact
     4921 ggcacctgcg cccaggcgaa ttgcgaagta ctcatcccgc cggcatcgat caggatcacc
     4981 ggcgacaccg ccacccagct catcatcggg atgtagctca acgacagcgt cgccgccccg
     5041 gtgagaaaaa tcgggttgcg aaacacatta cgaaaatcgc gcagtacgct caccgcgctg
     5101 aacggcaccg cgccgcgttg caccgtttct ggcatcgcca gcagcaggcc gcacaacgcc
     5161 aacagtccca tcaccgcaat aataccgaac agtaccttcc agtgaacgaa gtgcatcagc
     5221 gcggcgccgg agagcgggcc gataaccgga gcgaccagca caatggaggt aataatcgcc
     5281 atcagcttaa tggctttggt ttgaccgaaa gcctcctgta ccgtgacgta gccgaccgtt
     5341 gcgataaagc aaatgctggt gccctgcaca aaacgggcaa ccagaaactg cgtcattgag
     5401 gtcgtcaaca gcgtagccgc gcaggcgaga gtaaaaatta atgcgcctgc aatcagcact
     5461 ggccggcggc caatcctgtc ggatagcggc cccagaagcc attgcaacgc cattcctccc
     5521 gccagataga gactgaccga ggccggcgca agactgacgt cagcattaaa atcgcgcacg
     5581 acgttaatga tgccaggctg aatcagatcc gtcgtcagat aggcggcaaa atcgtacaaa
     5641 atcagcgcca tcgggaaaaa taacgttgtg gcgcgttggg agaaaaactg aataatccgt
     5701 tgcataaaaa atgcgctcca tgtcggagaa ccccatgatg ggacagcgaa actcaatacc
     5761 gtcatcgtga cgtcaggcag gcgatggaaa cagcggctgc ggatgtactg aatttcatgt
     5821 aatcaaaaac gctgccggtg aaaacacaga caggaagaga cgcgttctga atctcgtcag
     5881 aacgtgtggc gattacagat aacaatcagc acatcacacc tcgggaaatt tacgttgcac
     5941 ggaaaatata cacattaagt gtaattaaat tttgatgtta atcaaaagag tttgtctggt
     6001 taataaagat aaaggcaggg cgcgcaggct ggtattttgc gtgttcagtt ccgaaaatgc
     6061 atgtgcatta cagataacag gatttatctt tcgtcgcgcc tcgcaatgct gaaaaggtac
     6121 ggatgagaaa ggaattttca ggaggtagag tcgcagcatc ctggttttgg gtgacggagc
     6181 gccatgaaaa aatcgacgac ctcaacaccg catgatgcgg tgtttaaaac ctttttgcgc
     6241 cacccggaaa ccgcccgcga ttttatggag attcatctgc cggtgtcgtt acgccagctt
     6301 tgcgatctgc ggacgctaaa gctggagccc ggcagcttta ttgaaaaaaa tctgcgagcc
     6361 tattattccg atgtgctttg gtcgctgaaa acgcgcgagg gcgacggtta tatctatgtc
     6421 gtgattgaac atcagagcac gccggatgcg catatggcgt ttcggctgat gcggtatgcg
     6481 atggcggcaa tacaacagca tctggatgcg gggcataagc atcttccgct ggtggtgccg
     6541 atgctgtttt atcacggtgt tgatagcccg tatccttttt cgctgtgctg gctggatgag
     6601 tttgcgaacc cggaagtggc aagaagactc tatgccgctg cctttccgct ggtcgacatt
     6661 acggtggtat cggatgatga cattatgcag caccgccgca ttgcgctgct ggagctcatc
     6721 caaaaacata tccgccagcg cgacctgctg ggactggttg aacggattgc ttcgctgtta
     6781 gttactggtt gcgctaatga caggcagctt aaagcgctgt ttaattatct tatgattcag
     6841 cacggacata cgcctcgttt caccacgttt attcgtgatg tggtagggca tgtcccgcac
     6901 actaaggaga gactgatgac gctgatagag aggatccgcg cagcggatcg cagaaaaggg
     6961 gaacggcaag gaagacagct cggtctggag gaaggattag cagaaggatt agaaaaaggg
     7021 ctggaaaaag gtcagcatgt tgccgcattg cgtatcgcca gacagatgct ggcggacgga
     7081 cttgaccgcg agactgtcca gcggttcacc ggccttacgg ctgaagagct tcaggatgtt
     7141 agtcactaac gcggctccag tctgaatgtt gcaggcccgg tgcccaccgg gcaacgcgct
     7201 ctataattat cgttgataac cgtacgaata taccgaactt taccgatagc gccagccatc
     7261 tctactaccc ttattgttct gagcggcatt tccggctgcc ttaatgacga taacaaggag
     7321 acatgtgata tggcttacca gacagtgaat cctgccaata atcagctcat taaagagtat
     7381 cccccgcaca cggacgcgga tattgaagcc gcgctgcaaa aagctgacgc gctctatcac
     7441 tccgactggt ccaggggaga gattgaccaa cgtttgccgg tactgcataa gctggctgac
     7501 ttgatcgaca gccgtgttga agaactggca aaaatcgcca gccaggagat gggcaagctc
     7561 atcgagcaaa gccgtggcga agtcaaactc tgtgcgcaga tcgctcgcta ttatgcggat
     7621 aacgcgaagc agtttcttgt cccggtgcct tataaaaccg agtttggcga cgcgtgggta
     7681 gaacatcatc cgattggcgt catcatggct gttgagccgt ggaacttccc gtactatcag
     7741 ttgatgcgtg tgctggcgcc gaacctggcc gctggtaacc cggtgctggc gaaacatgcc
     7801 agcatcgtac cgcactgcgc cgagacattt gcccatctgg tgcgtgaagc cggcgcgccg
     7861 gatggcgcat ggaccaacct gtttatttcc tccgatcagg tggcgaatat catcgccgac
     7921 ccgcgcgtgc agggcgcggc gctgaccgga tctgaaaaag cggggagcgc cgtggcggca
     7981 caggcggcga agcacattaa aaaatcgacg ctggaactgg gcgggaacga tgtgttcgtc
     8041 gtgctggaca atgccgatct tgagaaagcg gtgaaaattg gcgtgcaggc acggctcact
     8101 aatgcggggc aggtatgtac ggcggcgaag cgctttatcc tgcatgagaa aatcgccgat
     8161 caattcctca gccagttcac cgaggcgttc aggaaggtga aggtggggga tcagatggac
     8221 gcttctaccg aactggggcc gctgtcgtcg aaagatgcgc tggaaacatt gaccagacag
     8281 gtcgaggaag cggtgaaaaa tggcgcgacg ctgcacgttg gcggcaagcc gctggaaagc
     8341 aaaggcaact tctttgagcc gaccattctg acccacatta cgcgtgacaa cccggcgtac
     8401 tttgaagagt tcttcggccc ggtggcgcag atgtatgtgg tgaaagacga tgatgaggcg
     8461 gtaaaactcg ccaacgattc ccactacggc cttggcggcg cggtgtttag tcaggatatt
     8521 gagcgcgcta aacgcatgtg cctcccggat tgaaaccggg atggtttata tcaactggct
     8581 gaccgacacc gcagcggagc tgccgttcgg cggcgttaag cgttcgggct tcggacgcga
     8641 gctatcggat ctggggatta aggagtttgt gaaccagaag ctggtagtgg tacgccgcta
     8701 atccctgttg cccctctgaa aacgggaggg gcctggcttt tttgcagcga aggacgcaga
     8761 tcttaaatca gaacgaaata aacgaacaaa acaccctcaa tcgccctcct tatttatcca
     8821 cgttgcacta accgtgcttt ttatcccggt attgtttgta cagacattca tgatgcccgc
     8881 attttctgtt ctatgcggag gctggtatgg aattttacga gaaccgcccc agacaaccat
     8941 tcattggcta tgtgcagctc agacgggcgc taaaaaggtg gtggctgcgt aagcgggcct
     9001 gtcaggcgct gcgacgaatg agtgacgagc agttaaggga tattgggttg gaaaggaagg
     9061 atgtggaata gtgaatctat tcaagggcaa tagtaagtaa aggattttat gatatattac
     9121 tatgccctta tgttatgcgt gctcactatt ttatatcatt tatattaata tcattaatct
     9181 ttttctcaat gtatttttct ggttttattt tggttttttg ctcaattgca tgatattttt
     9241 ccttatcaat ggttatagtc attttttctt ttttgttaaa tatgccaggg ataataatcg
     9301 cggctgcaat tatcaataat attattattg ctgcatgaat tttgcctttg ggaaatgctt
     9361 ttaatatagt acacaggatt gttataccct tatgtataag ataaggaaaa gatagaaata
     9421 aaacaaatgg gtaagcaaaa tttatgacat gtttcccata gtaattatta tttgttgtta
     9481 gcgaaccaat acagaatgcc atcacacaaa atagaaatat tccgaagcat aagaaggata
     9541 taatgaaaga accttgcata attcttttgt gcaactcttg caaaatacta tttgtgagcc
     9601 tttccagttt agtgttatga caaataacta ccaacatcgc aaaaaaaatc tcagataaag
     9661 caagcgaaaa taacgtattg aaggccatgt agctcatcag cgtttcgaaa aatatacttt
     9721 gctgaagata gtatggcaat agagcgttga cctccataaa aaaagtacat agaaatccaa
     9781 gggcgacata agcaattaag ccttcatttc tccaaagcgt aatgttttct tttactttta
     9841 gccgcatggt tttccttcac tcattgatat gaattataat taaagctggc aagggttctt
     9901 tgccagctta ttttatgcgt ttacttagaa cctgccatca cgctgataaa cgcctgcacc
     9961 tgcttttgct tacgcgccga cagcttgcac gcctggcgca gcgactgcat caactcgctt
    10021 tcttctggtt gcggctgctg tgccgtgagc acaatacagc cgttcatcac cctcacatcc
    10081 acctcggtac cggtggcgaa accggcggct tccagccact ggcccttcat ggtgagggcg
    10141 ggaatgcggg tataatccgg ataacgactc gcataactca cggtaaggtg acggttattt
    10201 gttggggata cttctggatc gcacggatct gcaatagaat ggacggtagt catgatggct
    10261 attctcctgg aatagtgatt gtgatgagcg atatggccgt gttcccgcac ggccatatcg
    10321 cgctaaatac ctgtatataa catcagtaaa taaaagaaaa gtccagctga aaatagactg
    10381 taatgggaat gttcaggaag aaactggata tatttttgat ggttatgaat gcgggggaat
    10441 aataaaaagc gcaccgggaa ggtgcgcagg aaaataagcg tcaggctttt ttacgcgagg
    10501 tttttttacc accgctggcg gcgcgttcgg ccttgatttt ttccagcagg gcggcggcgc
    10561 tgttttcacc gctgataaga cttgggtttt ccgcacgcca ctgggcggta agctcgccgc
    10621 ggaaggcctt tgccaggatt gactgggtga ggctgttgac gcggttcagg gcgttgttaa
    10681 cctgcttttc aatggtgtcg gcccaggcga agagttgttc gacgcggcgg acgatttcgt
    10741 gttgttcttc taatggagga actctgatgg gataatttgc tagtgctttt cctgtaaggt
    10801 gtttaattgt agttcctgta aagagctgag ataagctaat gttatttgaa tcatttttca
    10861 aattataaac taaccattcg gggatgattt tgtcttttac ccgtgctcga tgtaatgctt
    10921 tttggaaaat aacaggtatg tcctgaggtt cactccatat agcacatcga ccaggttcac
    10981 caccttcaca tattaaaaca tcgccaagct tgagtgataa ttctctgcgc tctatatctg
    11041 aaattagtat atcttgaagg ttttctaaat caaaactaaa ccagcgaaca tttatatttc
    11101 caagatattt tgttgcagag ccaaaatttt tagctttatc aagcatttta cctagtctgc
    11161 tatcaacaag ttcagagtat ttatgaacac tccaagttga tggtaggtct ggccattgcc
    11221 attcactaca taatggatgg tggtttcttt tatttgaacc aattaacaac ccgcttaccg
    11281 cagcagctag caccgcctga cgaaaacgtt tcaggatttg tgggatttgc tcaagacgtg
    11341 ctttggtgct gtctacctgt gccagcagcg tatcgagttt ttcggcgatg attttttgtt
    11401 cggctatagg tggtattggt actgtaagtg ttgataactt ttgagcatta acattttgta
    11461 cagcattccc tgctgacatt aaagacagct gattccaata gtcactcgac tctaaaaaac
    11521 gttttaagta atattctgaa aaataattaa ctggtttaaa tcgaataagg tatgaagcaa
    11581 aaacaacttg gcttggaggg ttttgtacca aaaaactaaa cccaaccgaa ccggctcgag
    11641 atatcacaat atctctgtcc tgtaattggt attttgaaac atcttccggg gcatccatgc
    11701 aataaggtac actggaccag tcaaccgctc cttttgtaat atcggttgtt cttaaaaatt
    11761 ttacatcccc catagagctt gacttagttg tgtagccata ttgaggctta ctgcatattt
    11821 ctgaaagatg ggttgtcacc c
//
LOCUS       DAGWFR010000124        11646 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.126, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000124 DAGWFR010000000
VERSION     DAGWFR010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 11646)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11646)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11646
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.126"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..1002)
                     /locus_tag="MOX77_003333"
     CDS             complement(<1..1002)
                     /locus_tag="MOX77_003333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001528257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358774.1"
                     /translation="MKKRSLLLLALPAMAFSTWAATSPPANLSPVYSYQDDVPSAATP
                     PVATTPVAKPASTSVLPFLGDEARKRGYELPEPFGLNINYMNIGQNINVDSINFNGLA
                     LGPNGGIPLDNAFKINVGHTREKSKTETVKLDAWLLPFMNVYGLVGYTDGHSVSQIGV
                     GLMTKNGHVFHPADLQNLKFKLDFKGTTYGIGTTLVGGVGNWFTAVDANYTQTQFDIL
                     DGSIDAFTVSPRVGYRFTTPGIDKMHLPSGKLNVWVGSMYQDVQQEFKGSLDDLTMPS
                     ATLQRLVSMANYNNNGRFDVKQHLQSPWNMLLGAQYEITRHFNVTTEFGFAERNSFFV
                     "
     gene            complement(1204..2016)
                     /gene="yidA"
                     /locus_tag="MOX77_003334"
     CDS             complement(1204..2016)
                     /gene="yidA"
                     /locus_tag="MOX77_003334"
                     /EC_number="3.1.3.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-phosphatase"
                     /protein_id="HCA3358775.1"
                     /translation="MAIKLIAIDMDGTLLLPDHTISPAVKNAIAAAREKGVNVVLTTG
                     RPYAGVHSYLKELHMEQPGDYCITYNGALVQKAGDGSTVAQTALSYDDYRYLEKLSRE
                     VGSHFHALDRNTLYTANRDISYYTVHESYVATIPLVFCEAEKMDPNTQFLKVMMIDEP
                     AVLDRAIARIPAEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLAEALGIKPEEVMAI
                     GDQENDIAMIEYAGMGVAMDNAIPSVKEVANFVTKSNLEDGVAWAIEQHVLS"
     gene            2305..3567
                     /locus_tag="MOX77_003335"
     CDS             2305..3567
                     /locus_tag="MOX77_003335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3358776.1"
                     /translation="MSMALTAPPGRKRFLIVACLFIGIFIAYLDRVNVSVLAANEPFL
                     AYMGIEGMPLQIGMMMTVFLAAYGIANVVLSPLGDYLGPRKAMMLCILIWTIALIIGG
                     VATSFALIIICRILLGIGEGFYYPLQSVFIKNWFPKQERGRANAAWIVGQSVAPAIAM
                     PFFTWWIGTHGWRSNFFLCAALGLIPLWLLWRYVADKPEQHKSISEQELAYIKAGQET
                     ESASSSESFMLRVKPVITNYCYWLLVLWYLCLQCLYWGMITWLPTYLKSARGFSWAEM
                     GWLASLPFVLSIFSKAAAGVFVDKIGRSAPILMVLMFFAGISIYFGTITEHKYMSAVL
                     LSFAVAFCTMGTPVAWTLLQGMVSGKSISAASGVMNGVANGLSSLSPVFIGLFISITG
                     TYTGGLLCLVFISAIAVVSAFVLTIKKY"
     gene            3581..4774
                     /locus_tag="MOX77_003336"
     CDS             3581..4774
                     /locus_tag="MOX77_003336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mandelate racemase/muconate lactonizing enzyme
                     family protein"
                     /protein_id="HCA3358777.1"
                     /translation="MMKITSIDIIDVANDFASATSKWRPVVVKINTDEGISGFGEVGL
                     AYGVGASAGIGMAKDLAAIIIGMDPMNNEAIWEKMLKKTFWGQGGGGIFSAAMSGIDI
                     ALWDIKGKAWGVPLYKMLGGKSREKIRTYASQLQFGWGDGSDKDMLTEPEQYAQAALT
                     AVSEGYDAIKVDTVAMDRHGNWNQQNLNGPLTDKILRLGYDRMAAIRDAVGPDVDIIA
                     EMHAFTDTTSAIQFGRMIEELGIFYYEEPVMPLNPGQMKQVADKINIPLAAGERIYWR
                     WGYRPFLENGSLSVIQPDICTCGGITEVKKICDMAHVYDKTVQIHVCGGPISTAVALH
                     METAIPNFVIHELHRYALLEPNTQTCKYNYLPKNGMYEVSELPGIGQELTEETMKKSP
                     TITVK"
     gene            4889..5797
                     /locus_tag="MOX77_003337"
     CDS             4889..5797
                     /locus_tag="MOX77_003337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001054600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCA3358778.1"
                     /translation="MNLTIRQFRAFLAVADLRSFTAASKYLCITQGAVSGLINEMESQ
                     MEVSLFDRTSRVVKLSPDGEKFLPAAMRVVEEFQRAENYARDLKEIKKSLVRVVGAPL
                     IACAFLPQIIHAFKRQHPHTHVQLIDKPMSQLQKSIMLGEADFGIGPERPLEPEIDKQ
                     TLFTTEIALYCHPDYRLHKKTVRWEEIQSEELIAVGNESVPMISATAGVRIKPKMTVE
                     HMATAMSLAAQCEGVVIAETFSRHYAKSYQLATCSLTPPLRRNMNLYFHAWRAQTPAT
                     QRFKEFLFRYMDEHHDALASQRRAGD"
     gene            complement(5804..8218)
                     /gene="gyrB"
                     /locus_tag="MOX77_003338"
     CDS             complement(5804..8218)
                     /gene="gyrB"
                     /locus_tag="MOX77_003338"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HCA3358779.1"
                     /translation="MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVV
                     DNAIDEALAGHCKDIVVTIHADNSVSVTDDGRGIPTGIHPEEGVSAAEVIMTVLHAGG
                     KFDDNSYKVSGGLHGVGVSVVNALSQKLELVIQRDGKIHRQIYEHGVPQAPLAVTGDT
                     DKTGTMVRFWPSHETFTNVTEFEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHY
                     EGGIKAFVEYLNKNKTPIHPNIFYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQR
                     DGGTHLAGFRAAMTRTLNAYMDKEGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSS
                     QTKDKLVSSEVKSAVEQQMNELLSEYLLENPSDAKIVVGKIIDAARAREAARRAREMT
                     RRKGALDLAGLPGKLADCQERDPALSELYLVEGDSAGGSAKQGRNRKNQAILPLKGKI
                     LNVEKARFDKMLSSQDVATLITALGCGIGRDEYNPDKLRYHSIIIMTDADVDGSHIRT
                     LLLTFFYRQMPEIVERGHVYIAQPPLYKVKKGKQEQYIKDDEAMDQYQISIALDGATL
                     HANAHAPALSGEALEKLVSEYNATQKMIGRMERRFPKALLKELVYQPTLTEADLSDEQ
                     TVTRWVNALITELNEKEQHGSQWKFDVHTNTEQNLFEPIVRVRTHGVDTDYPLDHEFV
                     TGAEYRRICTLGEKLRGLIEEDAFIERGERRQPVTSFEQALEWLVKESRRGLAIQRYK
                     GLGEMNPDQLWETTMDPESRRMLRVTVKDAIAADQLFTTLMGDAVEPRRAFIEENALK
                     AANIDI"
     gene            complement(8247..9320)
                     /gene="recF"
                     /locus_tag="MOX77_003339"
     CDS             complement(8247..9320)
                     /gene="recF"
                     /locus_tag="MOX77_003339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication/repair protein RecF"
                     /protein_id="HCA3358780.1"
                     /translation="MSLSRLLIKDFRNIENADLALSPGFNFLVGANGSGKTSVLEAIY
                     TLGHGRAFRSLQPGRVIRHEQEAFVLHGRLQGEERETSIGLTKDKQGDSKVRIDGTDG
                     HKIAELAHLMPMQLITPEGFTLLNGGPKYRRAFLDWGCFHNEAGFFTAWSNLKRLLKQ
                     RNAALRQVSRYEQLRPWDKELIPLAEQISTWRAEYSSAIAQDMADTCQQFLPEFSLTF
                     SFQRGWEKETDYADVLERSFERDRMLTYTAHGPHKADFRIRADGAPVEDTLSRGQLKL
                     LMCALRLAQGEFLTRESGRRCLYLIDDFASELDDARRGLLASRLKATQSQVFVSAISA
                     EHVIDMSDENSKMFTVEKGKITD"
     gene            complement(9518..10618)
                     /gene="dnaN"
                     /locus_tag="MOX77_003340"
     CDS             complement(9518..10618)
                     /gene="dnaN"
                     /locus_tag="MOX77_003340"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006177590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HCA3358781.1"
                     /translation="MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSL
                     TGTDLEMEMVARVTLSQPHEPGATTVPARKFFDICRGLPEGAEIAVQLEGDRMLVRSG
                     RSRFSLSTLPAADFPNLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLF
                     ETEGSELRTVATDGHRLAVCSMPLEASLPSHSVIVPRKGVIELMRMLDGGENPLRVQI
                     GSNNIRAHVGDFIFTSKLVDGRFPDYRRVLPKNPDKHLEAGCDILKQAFARAAILSNE
                     KFRGVRLYVSENQLKITANNPEQEEAEEILDVSYGGTEMEIGFNVSYVLDVLNALKCE
                     TVRIMLTDSVSSVQIEDAASQSAAYVVMPMRL"
     gene            complement(10623..>11646)
                     /gene="dnaA"
                     /locus_tag="MOX77_003341"
     CDS             complement(10623..>11646)
                     /gene="dnaA"
                     /locus_tag="MOX77_003341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HCA3358782.1"
                     /translation="YRSNVNVKHTFDNFVEGKSNQLARAAARQVADNPGGAYNPLFLY
                     GGTGLGKTHLLHAVGNGIMARKPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSV
                     DALLIDDIQFFANKERSQEEFFHTFNALLEGNQQIILTSDRYPKEINGVEDRLKSRFG
                     WGLTVAIEPPELETRVAILMKKADENDIRLPGEVAFFIAKRLRSNVRELEGALNRVIA
                     NANFTGRAITIDFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKIADLLSKRRSRSV
                     ARPRQMAMALAKELTNHSLPEIGDAFGGRDHTTVLHACRKIEQLREESHDIKEDFSNL
                     IRTLSS"
BASE COUNT         2706 a         3123 c         3013 g         2804 t
ORIGIN      
        1 cacaaagaag ctgttgcgct cggcaaagcc aaactcggtg gtaacgttga aatggcgggt
       61 tatttcatac tgagcgccca gcagcatgtt ccacggtgat tgcagatgct gtttgacgtc
      121 aaagcggccg ttattgttat agttagccat actcaccagc ctttgtagcg tcgctgatgg
      181 catggtcagg tcgtcgaggc tgcctttaaa ctcctgctgc acatcctgat acatgctgcc
      241 gacccagacg tttagcttgc ccgacggcag atgcatctta tctatacccg gggtggtaaa
      301 acggtaacca acgcgaggtg agacggtaaa ggcgtcgatg ctgccatcaa gaatatcgaa
      361 ctgtgtctgg gtgtagttag catcaacagc ggtaaaccag ttacctacgc cgccgaccag
      421 cgtggtgccg ataccatagg tagtgccttt aaagtcgagt ttaaacttga ggttttgcag
      481 atcggcggga tgaaaaacgt ggccattttt cgtcatcaac ccaacaccaa tttgcgaaac
      541 ggaatgacca tcggtatagc ccaccaggcc gtacacattc ataaatggca gcagccaggc
      601 atccagcttg accgtttcgg tcttgctctt ttcacgggta tgaccgacgt taattttaaa
      661 cgcgttatct aatggaattc ccccgttggg acctaaagcc aggccattaa agttgatgct
      721 atcaacgtta atattctgcc caatattcat gtagttaata ttgaggccaa atggctcggg
      781 aagctcatag ccacgctttc gggcttcatc acccagaaaa ggcaacactg atgtactggc
      841 aggctttgcc accggcgttg tcgcgactgg cggtgtggca gcagatggga cgtcatcctg
      901 atagctataa accggcgaca ggttcgccgg ggggctggta gccgcccagg tagaaaaagc
      961 catagcgggc agcgccaaca gcaaaaggga gcgttttttc ataatgatga agcgtttatt
     1021 ctggcgagaa gcgccgccgg atcgaaagga ggagggagaa tatagtaatc gtcgcctggt
     1081 gggcgggatt tctgtgcgaa ttaatctttt gaaataaaaa actattttct acaacgtctt
     1141 tgttgcaaca cattagcttc atgagtggaa ctatcggccc gacggcgatc gggccggagt
     1201 gaatcaggac agaacatgtt gttcaatcgc ccaggcaaca ccatcttcaa ggttcgattt
     1261 agtcacaaag ttagccacct ctttgaccga cggaatggcg ttgtccattg ccacgcccat
     1321 accggcgtat tcgatcatcg caatgtcgtt ttcctgatcg ccaatcgcca tcacctcctc
     1381 tggcttaata cccagcgcct cggccagtga ttttacgccg gtgcctttat taacccgttt
     1441 atcgaggatt tcaaggaagt acggcgcact tttcagcacg gtatactttt ccttcacctc
     1501 tgccggtata cgcgcaatcg ctcggtcgag aacggcaggc tcatcgatca tcataacttt
     1561 caggaactga gtgttcgggt ccatcttctc cgcttcacaa aataccagcg gaatggtcgc
     1621 cacatacgac tcatgcaccg tgtagtagct gatatcgcgg ttagcggtat aaagcgtatt
     1681 tcgatctaat gcgtggaagt gagaacccac ctcacgggat agtttttcca gataacggta
     1741 gtcatcatag ctgagcgctg tttgcgctac cgtactgcca tcccctgctt tctgcaccag
     1801 cgccccgttg taggtgatgc agtagtcgcc gggttgttcc atatgaagtt ctttcagata
     1861 gctgtgcaca cccgcatacg gacggcctgt ggtcagcacc acgtttaccc ctttttcacg
     1921 cgcagcggca atggcgtttt taaccgccgg agaaatggtg tgatcgggca gcaaaagggt
     1981 gccatccatg tcgatagcaa tgagtttaat agccatgaaa tccccgcatt aaatgagtcc
     2041 tgactcatgc taacgcgatt ccgctcaaaa aacagcaaaa gagtcaggga taaacggggc
     2101 taaagaataa gacaaacctt cctcttttgc tcagtacaga aggcgagttt tgtgcagtga
     2161 atactcacat ttattagata acctcattaa tcaaacagaa aataccgttt ttctaatctc
     2221 atcgatattg ttaccctggt catgaatcac cctattgtaa aaataaacaa aaatgatgtt
     2281 aatttaatta aaggagatcg ccaaatgtcg atggccctta ccgccccgcc tggcaggaaa
     2341 agatttttaa tcgttgcctg tctgtttatt ggaatattca ttgcctatct cgaccgcgtt
     2401 aatgtttcgg tattagccgc aaacgaaccc ttcttagcct atatgggtat tgaaggcatg
     2461 ccattgcaaa ttggcatgat gatgaccgtt tttcttgccg cttatggtat cgctaatgtt
     2521 gtattatcac cacttggcga ctaccttggt ccgagaaaag cgatgatgct ttgtatccta
     2581 atctggacca tcgccttaat tattggcgga gttgcgacat cgtttgcatt aattattatt
     2641 tgccgcatat tactgggtat cggagagggt ttttattatc cgctgcaaag cgtatttatt
     2701 aaaaactggt ttccgaagca ggagcgtggc cgggcaaacg cagcgtggat cgtcggccag
     2761 tcggtcgcgc ccgccattgc gatgcctttt ttcacctggt ggataggcac ccacggctgg
     2821 cgttccaact tctttttatg cgccgctctc gggttaatcc cactctggct actttggcga
     2881 tatgttgctg ataaaccaga acaacataaa agtatcagcg agcaggaact ggcttatatc
     2941 aaagccgggc aggaaacgga aagcgcaagc agcagcgaaa gttttatgtt gcgggtaaaa
     3001 ccggtgatta ccaactattg ctactggttg ctggtgctgt ggtacctgtg tctgcaatgc
     3061 ctgtactggg ggatgattac ctggctgcca acctatctta aatcagccag aggatttagc
     3121 tgggcagaaa tgggctggct agcgtcgctg ccgtttgtct tgtcgatatt ttccaaagcc
     3181 gccgcgggcg tcttcgtcga taaaatagga cgcagcgccc ccatattaat ggtgttaatg
     3241 tttttcgccg gtatcagtat ctatttcggc acaataaccg aacacaaata tatgtcagcg
     3301 gtactactct ccttcgccgt cgctttttgc acgatgggta cgcctgttgc gtggacatta
     3361 ttacaaggga tggtgtccgg gaaatctatt tccgccgcca gcggcgtaat gaacggcgtc
     3421 gcgaacggcc tgtcatcatt atcaccagta tttatcggtt tatttatctc tattacagga
     3481 acctataccg gcggcttatt atgtctggtt ttcatcagcg ctatcgccgt ggtatctgca
     3541 ttcgttttaa cgattaaaaa atattaatca caaggagtaa atgatgaaaa ttaccagcat
     3601 tgatattatt gatgttgcta atgattttgc gtccgccacc agcaaatggc gtccggtggt
     3661 ggtaaaaatt aataccgacg agggcatttc cggttttggc gaagtcgggt tggcctacgg
     3721 cgtcggcgcc tccgcaggca tcggcatggc aaaagattta gccgccatta tcatcggcat
     3781 ggacccgatg aataacgaag ccatctggga aaagatgctc aaaaagacgt tctggggaca
     3841 aggcggcggc ggcatctttt ccgcagcaat gagcggtatc gatatcgcgc tgtgggatat
     3901 caaaggcaaa gcgtggggcg tgccgctgta taaaatgctt ggcggcaaaa gccgcgagaa
     3961 aatcagaacc tacgccagtc agttacagtt tggttggggg gacggcagcg ataaagatat
     4021 gctgaccgag ccggagcagt atgcacaggc ggcgctgacc gccgtcagcg aaggctatga
     4081 cgcgataaaa gtggataccg tcgcaatgga tcgccacggc aactggaacc agcaaaacct
     4141 caacgggcct ctcaccgata aaatcctgcg tctgggctac gaccgtatgg ccgccattcg
     4201 cgatgcagtc ggcccggacg tggatatcat cgccgaaatg catgccttta cggataccac
     4261 ctcggcgatt cagtttggcc gcatgataga agagctgggc atcttctact acgaggaacc
     4321 ggtcatgccg ttaaaccccg gacaaatgaa acaagtggct gataaaatta atattccact
     4381 ggcggctggc gaacgcattt actggcgctg gggataccgt cctttcctgg aaaacggcag
     4441 cctgagcgtg atccagcccg atatttgtac ctgcggcggc atcaccgaag tgaagaaaat
     4501 ctgcgatatg gcgcatgttt atgacaaaac ggtgcaaatc cacgtttgcg gcgggccgat
     4561 ttccacagca gtggcgctgc atatggaaac cgcaatccct aacttcgtca tccacgaact
     4621 gcaccggtat gcgctgctgg agccgaatac acagacctgt aaatacaact acctgccgaa
     4681 gaacggcatg tacgaagtct cggagcttcc cggcatcggc caggaactga ccgaagaaac
     4741 catgaaaaaa tcaccaacca tcaccgtaaa ataagccaac tgtctgcctg cgccgcaggc
     4801 agacaccctg tatttgcgag tcgtatcaac gcgaccttat ccagcctgag ataaaatcct
     4861 ctcagtaaag gggtaacaca ggtggcaaat gaatttaact atccggcaat ttcgcgcgtt
     4921 tctggccgtc gcggatttgc gtagttttac cgccgccagc aaatatctgt gcatcacgca
     4981 gggagctgtt agcggtttaa tcaacgaaat ggaaagccag atggaggttt cccttttcga
     5041 ccgcacttcg cgcgtggtga agctatcgcc cgacggcgaa aagtttttac ccgccgccat
     5101 gcgggttgtt gaagagtttc aacgggccga aaattatgcc cgcgacctga aagagatcaa
     5161 aaaatccctg gtgcgggtgg tcggcgcgcc gctgatcgcc tgtgcttttc tgccgcaaat
     5221 catccatgcc tttaagcggc agcatccgca tacccacgta cagcttattg ataagcccat
     5281 gtcgcaatta caaaaaagca ttatgttggg agaagccgat tttggtatcg gcccggagcg
     5341 gccgctggaa ccggaaatcg acaaacaaac gctgttcaca acggaaatcg ccctgtactg
     5401 ccatccggac tatcggctgc ataaaaaaac ggtgcgctgg gaagagattc agagcgaaga
     5461 gctgatcgcc gttggcaacg aatccgttcc gatgatctcc gcgaccgctg gcgtgcgcat
     5521 taagcccaaa atgacggtgg aacatatggc gaccgccatg tcgctggcgg cgcagtgtga
     5581 aggcgtggtg atcgccgaaa ccttttcccg ccattacgcc aaaagctatc aattagcgac
     5641 ctgttcgctc acgcctccgc tgcggcgcaa tatgaacctt tatttccatg cgtggcgcgc
     5701 gcaaacgccc gccacgcagc gctttaaaga gtttctattc agatatatgg atgaacatca
     5761 tgatgccctg gccagccagc ggcgggccgg ggattaaggc aggttaaata tcgatgttcg
     5821 ccgctttcag ggcgttctcc tcgataaagg cacgacgcgg ctcaacggca tcacccatca
     5881 gcgtagtgaa cagctggtcg gcagcaattg catctttgac ggtcacgcgc agcatacggc
     5941 ggctttccgg gtccatggtg gtttcccaca gctgatccgg gttcatttca cccagacctt
     6001 tataacgctg gatagccaga ccgcgacgtg attctttcac cagccactcc agcgcctgct
     6061 cgaagctggt taccggctgg cgacgctcgc cgcgttcgat gaacgcgtcc tcttcaatca
     6121 gaccgcgcag cttctcgccc agcgtgcaga tacgacgata ttccgcgccg gtcacaaact
     6181 cgtgatccaa cggataatcg gtatccacgc catgcgtacg cacgcgaacg atcggctcga
     6241 acagattctg ttccgtatta gtatgaacat cgaacttcca ctgactgccg tgctgctctt
     6301 tctcattcag ctcggtaatc agcgcattca cccaacgcgt tacagtctgc tcatcagaaa
     6361 gatcggcttc ggtcagagtt ggctgataca ccagctcttt gagcagcgct ttcgggaagc
     6421 gacgctccat acgaccaatc attttctgcg tggcgttata ttcagagacc agtttttcta
     6481 acgcttcgcc ggatagcgct ggcgcatgag cgttcgcgtg cagagtcgca ccgtcaagcg
     6541 cgatggaaat ctggtactga tccatcgctt cgtcgtcttt gatgtactgt tcctgcttgc
     6601 ctttcttcac tttgtacagc ggcggctggg caatgtaaac gtggccgcgc tcgacgattt
     6661 ccggcatctg acgatagaag aaggtcaaca gcagcgtacg gatgtgcgag ccgtcgacgt
     6721 ccgcatcggt catgatgatg atgctgtgat agcgcagctt gtccgggttg tactcgtcgc
     6781 gaccgatacc gcagcccagc gcggtgatca gcgtcgccac atcctgggag gaaagcatct
     6841 tgtcgaagcg cgctttctcg acgttaagga ttttaccttt cagcggcaga atcgcctggt
     6901 tcttgcggtt acgcccctgc ttcgcagagc cgcccgcgga gtccccttcc accaggtaca
     6961 gttcggacag cgccgggtcg cgttcctgac aatccgccag tttgcccggc agaccggcta
     7021 aatccagcgc gcctttacga cgggtcattt cacgggcgcg acgcgccgct tcacgcgcac
     7081 gcgcggcgtc gataattttg ccgacgacga ttttcgcgtc agatgggttt tccagcaggt
     7141 attcgctcag cagttcgttc atctgctgtt ctaccgccga tttcacctcg gaagagacca
     7201 gcttatcttt ggtctgtgag gagaatttcg ggtccggcac ttttacggaa accaccgcaa
     7261 tcagaccttc acgggcatcg tcgccggtgg cgctgacttt ggcttttttg ctgtagcctt
     7321 ctttgtccat gtaggcgttc agcgtgcggg tcatcgccgc acggaagcct gccaggtgag
     7381 taccgccgtc gcgctgcgga atgttgttgg taaagcagta gatgttttcc tggaaaccat
     7441 cgttccactg cagcgctact tccacgccga taccgtcttt ttcggtggag aaatagaaga
     7501 tattcgggtg gatcggcgtt ttattcttgt tgagatattc aacaaacgcc ttgatgccgc
     7561 cttcgtagtg gaaatgatct tctttgccat cgcgcttgtc gcgcaggcgg atggaaacgc
     7621 ctgagttcag gaatgacagt tcacgcaggc gtttcgccag gatctcatat tcaaattcag
     7681 tgacgttagt gaaggtttcg tggctcggcc agaaacgtac catcgtgccg gttttatcgg
     7741 tatcgccagt gacggccagg ggtgcctgcg gcacgccgtg ctcgtagatc tgacggtgaa
     7801 ttttgccatc tcgctggata accagctcca gtttttgcga cagagcgttg actaccgaga
     7861 cgcccacccc gtgcagacca ccggagactt tataggagtt atcgtcaaat ttaccgcccg
     7921 cgtgcagaac ggtcatgatc acttccgccg ccgagacgcc ttcttccgga tgaatcccgg
     7981 tcggaatgcc acggccatca tccgttacgg acacggagtt atcggcgtga atagtcacga
     8041 cgatatcttt acagtgaccc gcgagcgctt cgtcgatagc gttatctacc acctcgaata
     8101 ccatgtggtg cagaccggtg ccgtcatccg tgtcgccgat atacataccc gggcgcttac
     8161 gcaccgcatc cagccctttc aggactttga tactggagga gtcataagaa ttcgacatca
     8221 acgtttctcg ctcatttaat cttgggttaa tccgttattt tacccttttc cacggtaaac
     8281 atcttcgaat tttcatccga catgtctata acgtgttcag cgctaattgc gctgacaaag
     8341 acctgcgatt gcgtggcttt taagcggctg gccagcagtc cgcgacgcgc atcgtcaagt
     8401 tcagaggcaa aatcatctat caggtacagg cagcgccgcc cgctttcgcg ggtaaggaac
     8461 tcgccctgcg ccagacgtaa ggcgcacatc aacaacttta gctgaccgcg cgacagggta
     8521 tcttccaccg gcgcgccgtc agcgcgaatg cgaaagtccg ctttatgcgg cccgtgcgcg
     8581 gtgtaggtca acatacggtc acgctcaaag cttcgctcca gcacgtccgc atagtctgtc
     8641 tctttctccc agccgcgctg gaaagagaac gtcagggaaa attcaggtaa aaactgctga
     8701 caggtatccg ccatgtcctg tgcgatagcg ctactgtact ccgcccgcca ggtactaatt
     8761 tgttccgcca acggaatcag ctctttatcc cacgggcgca attgctcata acggctcacc
     8821 tggcgcagcg cggcgttacg ctgtttcagc aatcgtttca ggttgctcca agcggtgaag
     8881 aatccggctt cgttgtgaaa gcatccccag tcaaggaacg ctcttctgta tttggggccg
     8941 ccgttgagta aagtaaaccc ctccggcgta atcaactgca tcggcattaa atgcgccagc
     9001 tccgcgatct tgtgaccgtc ggtaccgtcg atacggactt tgctgtcgcc ctgcttatct
     9061 ttggttaagc caatcgacgt ctcacgctct tcgccctgca ggcgcccgtg aagaacaaac
     9121 gcttcctgct catgacgaat cacgcggcca ggctgcaaac tgcgaaacgc ccgaccgtgg
     9181 ccaagcgtat aaatagcttc cagcacgctg gttttgccgc taccgttggc gccaaccagg
     9241 aaattaaagc cgggggataa agcgagatcc gcattttcta tgttgcggaa gtctttgatt
     9301 agcagtctgg atagcgacat atcaactcat aaccagggcg ttatcggcgc agttagtctg
     9361 gttacggcca gcgcacagca accggagcgt actggagtac gtgaggattg ctcgctgcgc
     9421 tcgcccttcg ggccgtccat aagacgtcca aaatacttcg tattttgtgc gagcactgcc
     9481 cggagccaga ataacaagta agatagcccg atattcttta caagcgcatt ggcataacaa
     9541 cataggcagc cgactgtgac gccgcatcct caatctgtac gctggatacg gaatccgtca
     9601 gcataatgcg cacggtttcg cacttcagcg cattgagcac gtccagcacg taactgacgt
     9661 taaagccgat ttccatctcc gtcccgccat agctcacgtc cagaatctct tccgcttctt
     9721 cctgttccgg gttattggcg gtgattttga gctgattctc actgacgtac agacgcacgc
     9781 cgcggaattt ctcattcgag aggattgctg cgcgggcaaa cgcctgcttg aggatatcgc
     9841 agcccgcttc cagatgttta tccggattct tcggcaatac gcgacggtaa tccgggaaac
     9901 gaccatccac cagcttcgag gtaaagataa agtcgccgac gtgcgcgcgg atattattac
     9961 tgccgatctg cacgcgcagc gggttttcgc caccgtcgag catacgcatc agttcaatca
    10021 cgcctttacg cggcacaatc accgagtggc taggtaaaga cgcctccagc ggcattgagc
    10081 acaccgccag acggtggccg tcggtcgcaa cagtgcgcag ttcgctacct tccgtttcaa
    10141 acagcatacc gtttaagtag tagcgcacat cctgatgggc catcgaaaac tgggtcgctt
    10201 caatcaggcg cttcatcgtg gcctgcggca gcgtaaattc aacttcgctt tgccagtcgt
    10261 caagattcgg gaaatcggcg gcaggcagcg tagacagcga gaagcggcta cggccagaac
    10321 gcaccagcat ccgatcgcct tccaactgaa cggcaatctc cgcgccctcc ggcaggccgc
    10381 ggcagatatc aaagaatttc cgcgccggca cggtagtggc gcctggctca tgcggctgag
    10441 aaagcgtaac gcgcgcgacc atctccattt caagatcggt gccggtcaga gaaagcgtac
    10501 cgtccgctac ctggaggagc aggttaccga gaatcggcag cgtaggacga ccgcccagcg
    10561 ggccgctgac ctgctgaagc ggttttaata aatgttcacg ttcaacggta aatttcatag
    10621 gatcacgacg acaatgttct gattaaattc gaaaaatctt ctttgatatc gtggctttct
    10681 tcacgcagtt gctcaatttt acgacaggca tgaagtacgg tagtgtggtc gcgcccgcca
    10741 aacgcatcgc cgatttccgg cagactgtgg ttggtgagct cttttgccag cgccatagcc
    10801 atctggcgcg gacgtgctac cgagcgagat cgacgcttag aaagcagatc cgcaattttg
    10861 attttgtaat actcggccac cgtcttctga atattgtcga tggtgaccag tttttcctgc
    10921 aacgccagta aatcgcgcag cgcttcgcgc acaaagtcga tagtaatcgc ccggccggta
    10981 aagttggcat tggcgatcac ccggttcagc gcgccttcca gttcacgtac gttagagcgt
    11041 agacgcttgg cgataaagaa cgctacttcg cctggcagac gaatatcatt ttcgtccgct
    11101 tttttcatca ggatcgccac gcgggtttcc agctctggtg gttcgatcgc cactgtcagc
    11161 ccccaaccaa agcgggactt gagacgatcc tcaacgccgt tgatctcttt cggatagcga
    11221 tccgacgtca aaatgatctg ctgattgcct tccagcagag cgttaaaggt gtggaaaaac
    11281 tcttcctggg atcgttcttt attggcgaag aattgaatat cgtcgatcag caatgcgtca
    11341 acggagcggt agtagcgttt aaactcttcg atggcgttat tttgcagggc ttttaccatg
    11401 tcctgcacaa agcgctcgga gtgcatatac acgactttcg cgttgggttt gcgcgccata
    11461 atgccgttac ccaccgcgtg cagcaggtga gttttaccca gaccggtgcc gccatagagg
    11521 aataacgggt tataggcgcc gccaggatta tccgccacct gacgtgccgc cgcgcgcgcc
    11581 agttggttgg atttaccttc gacgaagtta tcaaatgtat gcttaacatt gacgttggag
    11641 cggtag
//
LOCUS       DAGWFR010000125        11538 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.127, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000125 DAGWFR010000000
VERSION     DAGWFR010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 11538)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11538)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11538
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.127"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            138..431
                     /gene="ybfE"
                     /locus_tag="MOX77_003342"
     CDS             138..431
                     /gene="ybfE"
                     /locus_tag="MOX77_003342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LexA regulated protein"
                     /protein_id="HCA3358783.1"
                     /translation="MAKEQTDRTTLDLFAHERRPGRPKTNPLSRDEQLRINKRNQLKR
                     DKVRGLKRVELKLNAQAVDALNELAEARNISRSELIEEILMKQLMALRGQGLV"
     gene            582..1112
                     /gene="fldA"
                     /locus_tag="MOX77_003343"
     CDS             582..1112
                     /gene="fldA"
                     /locus_tag="MOX77_003343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin FldA"
                     /protein_id="HCA3358784.1"
                     /translation="MAITGIFFGSDTGNTENIAKMIQKQLGKDVADVHDIAKSSKEDL
                     EGYDILLLGIPTWYYGEAQCDWDDFFPTLEEIDFNGKLVALFGCGDQEDYAEYFCDAL
                     GTIRDIIEPRGATIVGHWPTAGYHFEASKGLADDDHFVGLAIDEDRQPELTAERVEKW
                     VKQVSAELHLGDILNA"
     gene            1316..1401
                     /locus_tag="MOX77_003344"
                     /pseudo
     CDS             1316..1401
                     /locus_tag="MOX77_003344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001491546.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ryhB-regulated fur leader peptide"
     gene            1394..1846
                     /gene="fur"
                     /locus_tag="MOX77_003345"
     CDS             1394..1846
                     /gene="fur"
                     /locus_tag="MOX77_003345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric iron uptake transcriptional regulator"
                     /protein_id="HCA3358785.1"
                     /translation="MTDNNTALKKAGLKVTLPRLKILEVLQEPDNHHVSAEDLYKRLI
                     DMGEEIGLATVYRVLNQFDDAGIVTRHNFEGGKSVFELTQQHHHDHLICLDCGKVIEF
                     SDDSIEARQREIAAKHGIRLTNHSLYLYGHCAEGDCREDEHAHDDATK"
     gene            1961..2887
                     /gene="tcuR"
                     /locus_tag="MOX77_003346"
     CDS             1961..2887
                     /gene="tcuR"
                     /locus_tag="MOX77_003346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tricarballylate utilization LysR family
                     transcriptional regulator TcuR"
                     /protein_id="HCA3358786.1"
                     /translation="MELRQLRYFVRIIETGSMGSAAQDLDIGVSALSQQMSRLENELA
                     IRLLQRTSRGVTPTNAGLAFYSQAQLALRHADDAILAAREARLSGHVSVGMAPSTASI
                     LGIPFIHAMQENYADVRLHVVESLSGNLERMINTRQIDLAVVFQKDKILRWSARPILE
                     EQLFLIGSHALLAALPDNPITPEQLAGIPLIMPSQGHGLRGRLDAVCKEHALNVEIVA
                     EIDGLALLMRAVRDGLGATLQPGAAISHLDNDALRVIGVHNPVLSRPNFLVSLSDDEL
                     TPAGLAARVVLTKVMRQLVDAGEWPGATLYAY"
     gene            2985..4388
                     /gene="tcuA"
                     /locus_tag="MOX77_003347"
     CDS             2985..4388
                     /gene="tcuA"
                     /locus_tag="MOX77_003347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent tricarballylate dehydrogenase
                     TcuA"
                     /protein_id="HCA3358787.1"
                     /translation="MVDVLVIGGGNAALCAALTAREAGASVLLLEAAPREWRGGNSQH
                     TRNLRCMHDAPQDVLVESYPEEEFWQDLWRVTDGNTNEALARLVIRTSSQCRDWMRKH
                     GVNFQPPLSGALHVARTNAFFMGGGKALVNAYYRSAERLGVQIRYNTPVHALELHDGE
                     FVAALAGSERITAKACVLAAGGFESNREWLREAWGENARGEWPADNFLIRGTRFNQGV
                     LLKFMMDAGADIIGDPSQSHCVAIDARAPLYDGGICTRVDCVSLGIVVNRDAERFYDE
                     GEDFWPKRYAIWGRLVAQQPGQIGYSIIDSKAIGHFMPPVFPGAQANTLAELACQLGL
                     DAEKFTHTVTQYNQACQPGHFDHTLLDDCATKNLTPAKTHWARPLDAPPYYGYALRPG
                     ITFTYLGLKVNERAAVHFAGHPSRNLFVAGEMMAGNVLGKGYTAGVGMSIGTTFGRIA
                     GIEAARAAHKEAQHETA"
     gene            4375..5514
                     /gene="tcuB"
                     /locus_tag="MOX77_003348"
     CDS             4375..5514
                     /gene="tcuB"
                     /locus_tag="MOX77_003348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tricarballylate utilization protein TcuB"
                     /protein_id="HCA3358788.1"
                     /translation="MKQLEKLIIEATVLTEPEAEVERVMQVCNACRYCEGFCAVFPAM
                     TQRLEFGKADIHYLANLCHNCGACLHACQYAPPHEFAINVPKAMAQARLETYQQYAQP
                     AAFGALYRRAGITVALALIVGLTLFLLLAMALKGSLIHPPLAGDFYQIFPHSLLAWMF
                     GSVFVLAIGLLMAGVISFWREISPGVPRSAEIAEASHNALTLKYLDGGHGKGCNEADD
                     AFTLLRRRFHHFTFYGFMLCFAATVVATGYHYVAGWEAPYPFFSLPVMLGTLGGIGLL
                     IGPAGLLWLNLRRSPLHSDARQKPMDRGFILLLFLTSLTGLALLAGRDTSGMGILLAL
                     HLGVVMALFLTLPYGKFAHGFFRCAALLKWAVEKRRGKHAGDTGN"
     gene            5565..6869
                     /gene="tcuC"
                     /locus_tag="MOX77_003349"
     CDS             5565..6869
                     /gene="tcuC"
                     /locus_tag="MOX77_003349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tricarballylate/proton symporter TcuC"
                     /protein_id="HCA3358789.1"
                     /translation="MAQHTPATSRAGTFGAILRVTSGNFLEQFDFFLFGFYATYIART
                     FFPAESEFASLMLTFAVFGSGFLMRPVGAIVLGAYIDRIGRRKGLMVTLAIMGCGTLL
                     IALVPGYQTIGLAAPALVLLGRLLQGFSAGVELGGVSVYLSEIATPGNKGFYTSWQSA
                     SQQVAIVVAALIGYSLNITLGHDAISEWGWRIPFFIGCMIIPLIFVLRRSLQETEAFL
                     QRKHRPDTREIFATIAKNWRIITAGTLLVAMTTTTFYFITVYTPTYGRTVLNLSARDS
                     LIVTMLVGVSNFIWLPIGGAISDRIGRRAVLMGITLLALITTWPVMQWLTAAPDFTRM
                     TLVLLWFSFFFGMYNGAMVAALTEVMPVYVRTVGFSLAFSLATAIFGGLTPAISTALV
                     KLTGDKSSPGWWLMCAALCGLAATAMLFVRLSRGYIAAENKA"
     gene            complement(6918..7250)
                     /locus_tag="MOX77_003350"
     CDS             complement(6918..7250)
                     /locus_tag="MOX77_003350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HCA3358790.1"
                     /translation="MKKILLIASMTAGLTACASSPAPEEDSRLKEAYSACINTAQGSP
                     EKIEACQSVLNVLKKERKHQQFANEESVRVLDYQQCIQATRTGNDQAVKADCDKVWQE
                     IRSHNNVQ"
     gene            complement(7300..8706)
                     /gene="chiP"
                     /locus_tag="MOX77_003351"
     CDS             complement(7300..8706)
                     /gene="chiP"
                     /locus_tag="MOX77_003351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chitoporin"
                     /protein_id="HCA3358791.1"
                     /translation="MRTFSGKRSTLALAIAGITAMSGWIVVPQAQASGFFDDSTLTGG
                     IYYWQRERDRKDVTDGDKYKTNLSHATWNANLDFQSGYAADMFGLDIAAFTAIEMAEN
                     GDSGHPNEIAFSKKNKGYDEDYSGDKSGISLYKAAAKFKYGPVWARAGYIQPTGQTLL
                     APHWSFMPGTYQGAEAGASFDYGDAGALSFSYMWTNEYKAPWHTEMDKFYQADKKTNV
                     DYLHSIGAKYDFKNDLVLEAAFGQSEGYVDQYFAKASYKFDLGGNPFTTSYQFYGARD
                     KVDDRSVNDIYDGTAWLQALTFGYKVAEVVDLRLEGTWVKADGQQGYFLQRMTPTYAS
                     SNGRLDIWWDNRSDFNANGEKAVFFGAMYDLKNWNLPGWAVGASYVYAWDAKPATWQS
                     NPDAYYDKNRTIEESSYSLDAVYTLQEGRAKGTMFKLHFTEYDNHSNIPSWGGGYGNI
                     FQDERDVKFIVIAPFTIF"
     gene            complement(9158..10825)
                     /gene="glnS"
                     /locus_tag="MOX77_003352"
     CDS             complement(9158..10825)
                     /gene="glnS"
                     /locus_tag="MOX77_003352"
                     /EC_number="6.1.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--tRNA ligase"
                     /protein_id="HCA3358792.1"
                     /translation="MSEAEARPTNFIRQIIDEDLASGKHTTVHTRFPPEPNGYLHIGH
                     AKSICLNFGIAQDYQGQCNLRFDDTNPVKEDIEYVDSIKNDVEWLGFHWSGDIRYSSD
                     YFDQLHAYAVELINKGLAYVDELTPEQIREYRGTLTAPGKNSPFRDRSVEENLALFEK
                     MRTGGFEEGKACLRAKIDMASPFIVMRDPVLYRIKFAEHHQTGTKWCIYPMYDFTHCI
                     SDALEGITHSLCTLEFQDNRRLYDWVLDNITIPVHPRQYEFSRLNLEYTVMSKRKLNL
                     LVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQDNTIEMASLESCIRE
                     DLNENAPRAMAVIDPVKLVIENYPQGESEMVTMPNHPNKPEMGSREVPFSGEIWIDRA
                     DFREEANKQYKRLVMGKEVRLRNAYVIKAERVEKDAEGNITTIFCTYDADTLSKDPAD
                     GRKVKGVIHWVSVAHALPIEIRLYDRLFSVPNPGAAEDFLSVINPESLVIKQGYGEPS
                     LKAAVAGKAFQFEREGYFCLDSRYATADKLVFNRTVGLRDTWAKAGE"
     gene            complement(11036..>11538)
                     /locus_tag="MOX77_003353"
     CDS             complement(11036..>11538)
                     /locus_tag="MOX77_003353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PTS glucose transporter subunit IIA"
                     /protein_id="HCA3358793.1"
                     /translation="APAAKPQAVPNAVTIAELVSPITGEVVALDQVPDEAFASKAVGD
                     GVAVKPTDKTVVSPAAGTIVKIFNTNHAFCLETEKGAEIVVHMGIDTVALNGQGFKRL
                     VEEGAEVTAGQPVLELDLDFLNANARSKISPVVCSNSDDFSALVIKADGHVVAGQTPL
                     YEIKSK"
BASE COUNT         2600 a         3078 c         3037 g         2823 t
ORIGIN      
        1 ctaactgatt aaaaactcat cgcctgtgcg cgattacgcg cgcgagcgtt ggcgtcgctt
       61 cctcgctgat gtatgatggc gcgctatcca tccgggcata agcctggctg attgtttccc
      121 ccgaagtcac caaaatcatg gccaaagaac aaacggaccg tacgacatta gatctgttcg
      181 cgcacgagcg tcgcccggga cgacctaaaa cgaatccgct ttcgcgcgat gaacagttac
      241 gcatcaacaa gcgcaaccag ttaaaacgcg acaaagttcg tggcctcaag cgtgtcgaat
      301 taaaactcaa cgcacaagcg gttgacgcgc tgaatgagct ggccgaagcg cgcaacatta
      361 gccgcagcga gctcattgaa gaaatattaa tgaagcagct tatggcgctg cgcggccagg
      421 gtttagtctg aaaataagtt ttgtttcata tttcgtgtag cagagcgtgc agtcccgcgt
      481 gattgctgtt tccgcatatc tgcctgttct gctatgattg cccttatccg tgggcaattc
      541 gccaccacca tttcaataag tttcaagagg ttattttact catggcaatc actggcatct
      601 ttttcggcag cgacaccggt aataccgaaa atatcgcaaa aatgattcaa aaacagcttg
      661 gtaaagacgt tgccgatgtg catgacattg caaaaagcag taaagaagac ctagaagggt
      721 atgacattct gctgctgggc atcccaacct ggtactatgg cgaagcgcaa tgtgactggg
      781 atgacttctt cccgactctc gaagagattg actttaacgg taagctggtg gcgctgtttg
      841 gctgtggcga tcaggaagac tacgcggaat acttctgtga tgcgctgggc acgattcgcg
      901 acattattga gccgcgcggc gccacgattg tgggtcactg gccaaccgca ggctatcatt
      961 ttgaagcctc taaaggtctg gctgacgacg atcattttgt cggcctggcg attgacgaag
     1021 accgtcagcc tgaactgacc gccgagcgtg ttgaaaaatg ggttaagcaa gtttcggctg
     1081 aattgcacct cggcgacatc ctcaacgcct aatcttatgc ggcgcagcgt tatatctgcg
     1141 ccgcatcaat agacaagacc aatcaaaata attgctacaa atttgtaact ttcgcaccca
     1201 tccctgtaca atgtccgggt gtaatcaggt ggcgccagaa tttgcaggca aaaccacagt
     1261 tttattaaca tctgcgagag acttgcggtt ttcatttcgg catggcagtc ctataatgat
     1321 acgcattatc ttgagtgcaa tttctgtcac ttctctaatg aagtgaatcg tttagcaaca
     1381 ggacagattc cgcatgactg acaacaatac cgcattaaag aaggctggcc tgaaagtaac
     1441 gcttcctcgt ttaaaaattc tggaagttct tcaggaacca gataaccatc acgtcagtgc
     1501 ggaagattta tacaaacgcc tgatcgacat gggtgaagaa atcggtctgg caaccgtata
     1561 ccgtgtgctg aaccagtttg acgatgccgg tatcgtgacc cgccataact ttgaaggcgg
     1621 taaatccgtt tttgaactga cgcaacagca tcatcacgac catcttatct gccttgactg
     1681 cggaaaagtg attgaattta gtgatgactc tattgaagcg cgccagcgtg aaattgcggc
     1741 gaaacacggt attcgtttaa ctaatcacag cctctatctt tacggccact gcgctgaagg
     1801 cgactgccgc gaagacgagc acgcgcacga tgacgcgact aaataagtgt aaatctttcg
     1861 aagagccaac cgcccggttg gcttttttat atcctcctct ttcctgccgc ttgatgttga
     1921 tttaatgtaa aaaacgctat cgcatctcag gagagcagga atggagcttc gccagttacg
     1981 ctatttcgtg cgtattattg aaaccggcag tatgggcagc gccgcacagg atcttgatat
     2041 tggcgtttca gcattgagtc aacagatgtc ccgtctggaa aacgagctcg ccatccgtct
     2101 gctgcagcgc acctcgcgcg gcgtaacgcc aaccaacgcc gggctggcct tttattcaca
     2161 ggcgcaactc gccctgcgtc atgccgacga cgcgattctc gccgccagag aagcgcgcct
     2221 ttccggtcat gtgagcgtag gaatggcccc cagtaccgcc tccatactgg gtataccgtt
     2281 tatccatgcc atgcaggaaa actatgccga tgtccgactg catgtggtgg aaagcttgtc
     2341 cggtaatctg gaaagaatga tcaatacccg ccagattgat ttagccgttg tctttcaaaa
     2401 agataaaatc ctgcgctgga gcgccagacc gatccttgaa gaacagcttt ttctgattgg
     2461 ctcccatgcc ctgctggcgg cgcttcctga taacccgatc acacctgaac aactggcagg
     2521 cattccgctc attatgccaa gccagggaca tgggctgcgc ggcaggctgg acgctgtctg
     2581 caaggaacat gcgcttaatg ttgaaatcgt cgcggaaatt gacggcctgg cgttgttgat
     2641 gcgcgccgtg cgcgacggtc ttggcgccac gttgcagccc ggcgcggcga tttctcatct
     2701 ggataacgac gcgctacgcg tgatcggcgt ccataatccg gtactcagcc gccccaattt
     2761 tttagtcagc ctgtcggatg atgaactgac gcccgccggc cttgccgcca gagtagtcct
     2821 taccaaagtt atgcgtcagt tagtcgacgc cggtgaatgg ccaggcgcaa ccctttacgc
     2881 ttactaaacc cctgtttagc gctacctgat agcgcgccgc ttatttatcc gtatacattt
     2941 caattacaaa tttaacaaat agttaaatgg tacgggagta taagatggtt gatgtactgg
     3001 tgataggcgg aggcaatgcc gcattatgcg ccgccctgac cgcacgggaa gcgggcgcat
     3061 cggttctgct gctggaggct gccccgcgag aatggcgcgg cggaaattct cagcacacac
     3121 gaaacctgcg ctgtatgcat gatgcgccgc aggatgtgct ggtggaaagc tatcctgaag
     3181 aggaattctg gcaggatctg tggcgagtca ccgacggcaa caccaacgag gcgctggcgc
     3241 ggctggtcat tcgcacctct tcgcaatgcc gcgactggat gcgcaaacat ggcgttaact
     3301 ttcaaccgcc actatctggg gcgctccacg ttgcgcgcac caatgcgttt tttatgggcg
     3361 gcgggaaagc gctcgtcaat gcctattacc gtagcgccga acggctgggc gtacagattc
     3421 gctataacac gccggttcac gcgcttgaac ttcatgacgg cgaattcgtg gcggcgctgg
     3481 cgggtagcga acgtattacc gccaaagcct gcgtattagc ggctggcggt ttcgaatcaa
     3541 accgtgaatg gctgcgggag gcctggggag aaaacgcccg cggcgaatgg cccgcggata
     3601 atttcctgat tcgcggcacg cgttttaacc agggcgtatt actcaaattt atgatggatg
     3661 ccggcgcgga tatcattggc gatccgtccc agtcgcactg cgtagcgatt gatgccaggg
     3721 cgccgctgta cgacggcggt atttgtactc gcgtggattg cgtatcgctg ggtattgtcg
     3781 tgaatcgcga cgccgagcgt ttttatgatg aaggcgaaga tttctggccg aagcgttacg
     3841 ccatttgggg gcggctggtg gctcaacagc caggacaaat tggctattcg attattgaca
     3901 gcaaagccat tggccacttt atgccgccgg tttttcctgg cgcgcaggcc aatacgctgg
     3961 ctgaactggc ctgccagttg gggctggacg cggaaaaatt tacccatacc gtcacgcagt
     4021 ataaccaggc ctgccagccc ggtcattttg atcatacctt gcttgatgac tgcgccacca
     4081 aaaacctgac gccggcgaaa acccactggg cgcgcccgct tgatgcgccg ccctactacg
     4141 gttatgcgct gcgacccggc atcacgttta cctacctggg cctgaaagtc aatgaacgtg
     4201 ccgcggtgca ttttgccggt catccaagcc gcaacctgtt tgttgccggc gagatgatgg
     4261 caggaaatgt tctgggcaag gggtataccg caggcgtagg catgtctatc ggcacaacct
     4321 ttggccgcat tgcgggaata gaagccgctc gcgcggcgca caaggaggcg cagcatgaaa
     4381 cagcttgaaa aattaatcat tgaggccacc gtgcttaccg aaccggaagc cgaggtcgaa
     4441 cgcgtcatgc aagtgtgtaa cgcgtgtcgc tactgcgaag gtttttgcgc ggtatttccg
     4501 gcgatgaccc agcggctcga attcggtaaa gccgatattc attatctggc gaatttatgt
     4561 cataactgcg gcgcctgcct gcacgcgtgc cagtacgcgc cgccccatga atttgccatt
     4621 aacgtgccga aagcgatggc gcaagcccgc ctggagacgt atcaacagta tgcccagccc
     4681 gccgcttttg gcgcgttata ccgtcgggcg gggatcaccg tcgcgctggc gctgatagtc
     4741 ggtctgacgc tctttttatt actggcgatg gcgctgaaag ggtcgctgat tcatccgccg
     4801 ctggccggtg acttctatca aatttttccg catagcctgc tggcatggat gtttggctca
     4861 gtttttgtgc tggcaatcgg tttgcttatg gcgggcgtaa tcagcttctg gcgtgagatc
     4921 tcgccgggtg taccgcgttc ggcggagatt gcggaagcgt cgcacaatgc gttaacgctg
     4981 aaatatctcg acggcggtca cggcaaaggc tgtaacgaag cggacgatgc gttcacgctg
     5041 ctgcgccgtc gctttcatca ctttaccttt tacggtttta tgctctgttt tgccgccacg
     5101 gtcgtggcga cgggctatca ctacgtcgcc ggttgggaag cgccctaccc gttctttagc
     5161 ctgccggtca tgctcggcac gctgggcggt atcggtctgc ttatcggccc ggccgggcta
     5221 ctgtggctca atctgcggcg gtcgccgtta catagcgatg cgcgccagaa acccatggat
     5281 cgcggcttta ttctgctgct gttcttaacc agtcttaccg ggctggcgct gctggcaggc
     5341 agagacacca gcggaatggg catactgctg gcgctccatt taggcgtggt gatggcgctc
     5401 tttctcaccc ttccctacgg aaaattcgcc cacggatttt tccgctgcgc ggccttactc
     5461 aaatgggcag ttgagaagcg acgcggaaaa catgcggggg atacaggcaa ctgacccgca
     5521 acatcttacc tataaaacaa taaagacagt ggagagcaaa ccctatggca caacacacac
     5581 ctgcaacatc gcgcgccggc acgttcggcg caatactgcg cgtgacaagc ggcaatttcc
     5641 ttgaacagtt tgattttttc ttgttcggat tttacgccac ctatatcgcc agaacgtttt
     5701 ttccggcgga aagcgaattt gcctcattaa tgttgacctt tgccgtcttt ggctccggtt
     5761 ttttaatgcg ccccgtcggc gcgattgtgc ttggcgccta tattgacaga atcggacgtc
     5821 gtaaagggct gatggtgacg ctggcgatta tgggctgcgg tacgttgctc atcgccctcg
     5881 tccccggcta ccagacgatc ggcctggcag cgcctgcgtt ggtgttgttg ggccggttat
     5941 tacaaggatt ttctgcgggc gttgagttag gcggcgtctc ggtctatctg tccgaaatcg
     6001 caacgccagg caataaaggg ttttatacca gctggcaatc cgccagtcag caggttgcga
     6061 tcgttgtcgc cgcgttgatt ggttatagcc tgaatatcac gctgggacac gacgcgatat
     6121 cggagtgggg ctggcgaatt ccgttcttta tcggctgtat gatcattccg ctgatttttg
     6181 ttttacgtcg ttcattacaa gaaacagaag cgtttttaca acgcaagcat cgccccgaca
     6241 ctagggaaat ttttgcaact atcgccaaaa actggcgcat tattacggcc ggaacgctgc
     6301 tggtggcgat gaccaccaca acgttttatt ttatcaccgt ttatacgccg acctatggca
     6361 gaaccgtgct taatctcagc gcgcgggaca gtttgatcgt caccatgtta gtgggggtgt
     6421 ccaattttat ctggttaccc attggcggcg cgatttccga ccggattggc cgtcgcgccg
     6481 tgttaatggg cattacgttg ctggcgctga tcaccacctg gcccgtcatg cagtggctga
     6541 ccgccgcgcc cgactttacc cgcatgacgc tggtactgct gtggttctct ttcttttttg
     6601 gcatgtataa cggcgcaatg gtcgcggcgt taaccgaagt gatgccagtc tatgtgcgta
     6661 ccgttggttt ctcgctggcc tttagcctgg cgacggcaat ttttggcggc ctgacgccgg
     6721 ccatctctac cgcgctggta aagttaaccg gcgataaaag ctcgcccggc tggtggctga
     6781 tgtgcgcagc gttatgtgga cttgccgcga cggcgatgct gtttgtacgt ctgagtcgcg
     6841 gctatatcgc ggcagaaaat aaagcctgaa aaaaccacag gcggaaaaca ttcgcccgtg
     6901 ggtggcaagg cagggtttta ttgcacgtta ttatgactgc gaatttcctg ccagacctta
     6961 tcgcagtcag ccttgaccgc ctgatcgtta cccgtgcgcg tcgcctgaat gcactgctga
     7021 tagtccagta cccgcacgct ttcttcgtta gcaaattgct gatgtttgcg ctctttttta
     7081 aggacattca gtacgctttg gcaggcctct atcttctcag gcgagccctg tgcggtattg
     7141 atacaggcgc tgtacgcctc tttcagccga ctatcttctt ccggcgcggg tgatgacgcg
     7201 caggccgtca aaccggcggt catgctggcg atgagtaaaa tttttttcat aggtcgttcc
     7261 tcaacagcgc ggcagaccgg cagcctgccg catctgacat cagaaaatag tgaatggcgc
     7321 aataacgata aatttcacgt cacgttcatc ctggaagatg ttgccgtaac caccgcccca
     7381 gcttggaata ttggagtggt tgtcatattc ggtgaagtgc agtttgaaca tggtgccttt
     7441 ggcacgcccc tcctgcaggg tatagaccgc atccagactg tatgaggact cttcgatagt
     7501 gcggtttttg tcgtagtaag catccgggtt actttgccag gttgccggtt tagcatccca
     7561 ggcgtaaacg taagacgcgc ccacagccca gcccggcaga ttccagtttt tcaggtcata
     7621 catcgcgccg aagaaaaccg ccttttcacc gttagcgtta aagtcggagc ggttatccca
     7681 ccagatatcc agacgaccgt ttgaagaggc gtaggttggc gtcatacgtt gcagaaaata
     7741 gccctgctga ccgtccgctt tcacccaggt gccctccaga cgcaggtcaa ccacttccgc
     7801 gactttgtag ccgaaggtca acgcctgcag ccaggccgta ccgtcgtaaa tgtcattcac
     7861 gctgcgatcg tctactttgt cgcgcgcgcc gtagaactgg taactggtgg tgaacggatt
     7921 gccgcctaaa tcaaatttat agctggcctt tgcgaaatat tgatcgacat agccttcgga
     7981 ctgaccaaac gccgcttcca gcaccagatc atttttgaag tcgtacttcg cgccgatgga
     8041 gtggagatag tctacattgg tttttttatc cgcctgataa aacttatcca tttcggtatg
     8101 ccacggcgct ttatattcgt tagtccacat gtaggaaaaa cttaacgcgc ccgcatcgcc
     8161 atagtcaaaa ctggcgccgg cttccgcacc ctgataggta cccggcataa aactccagtg
     8221 cggcgctaac agcgtctgac cggtaggctg aatataaccg gcgcgcgccc agaccgggcc
     8281 atatttaaat ttcgcggcgg ctttataaag actgataccg ctcttatcgc cggaatagtc
     8341 ttcgtcgtag cctttattct ttttcgagaa ggcaatttcg tttggatgac cgctgtcgcc
     8401 gttttctgcc atttcaatcg cggtaaacgc cgcgatatcc agaccgaaca tatccgcagc
     8461 gtaaccagac tgaaaatcca ggttagcgtt ccaggtcgca tgagaaaggt tagttttata
     8521 tttgtcgccg tcggtcacat ctttgcgatc gcgttcacgc tgccaataat agatgccgcc
     8581 cgttaacgtg gagtcgtcga aaaagccgga ggcttgcgcc tgcggaacaa cgatccaccc
     8641 cgacattgct gtgataccgg cgatagccag agccagcgta ctacgtttgc cactaaacgt
     8701 acgcataagt taatcctctt tgacgtataa attgctgccg acaaaagcga acagcgaaaa
     8761 aataaaaata aaaagtagcg ctgagaaacc tcatttacta cgttaaatag actatttttc
     8821 gcgatgcgaa ttatcaatct ctttctgtaa ccagtatgta ataatatgag caaccgcaca
     8881 tatttaattg ctttctgtta cattcgactg ctggtggggg aagcagaccg ccagaaagaa
     8941 aattgacttg ttttccatag gcatgaaaat aattgtctcc tgttgacctg acgcttataa
     9001 catttagatt aataatcatt tatcagatca ataattttca gagaataatt aattcgcctc
     9061 gcaaaaaaga gaatcgactt agaaatgcag agaaaaaacg ccgcagaacg cggcgttgac
     9121 aaggtatttt tacagcattc gcctgttggc gcagtgctta ttcgcccgct ttcgcccagg
     9181 tatcacgcag gcccacggtg cggttaaaga ccagcttatc ggccgttgca tagcggctgt
     9241 caaggcagaa gtaaccttca cgttcaaact ggaaagcttt ccctgctacc gccgctttca
     9301 gcgacggctc gccatacccc tgcttaatca ctaatgattc ggggttgata acagacagga
     9361 agtcctccgc ggcgcccggg ttcggcacgc tgaacagacg gtcgtagaga cgaatttcaa
     9421 tcggcagcgc atgtgctacg ctaacccagt ggattacgcc tttcacttta cgcccgtcag
     9481 ccggatcttt actcagcgta tcagcatcat aggtacagaa gatggtggtg atattccctt
     9541 cggcatcctt ctctacgcgc tccgctttaa tgacgtaggc attacgcaga cgcacttctt
     9601 tgcccatcac cagacgtttg tactgtttgt tcgcttcttc gcggaaatcc gcgcgatcga
     9661 tccagatctc accgctaaac ggcacttcac ggctgcccat ctccggttta ttcggatggt
     9721 taggcatggt aaccatttcg ctctcgccct gcgggtagtt ttcgataacc agttttaccg
     9781 gatcgattac cgccatcgcg cgcggcgcgt tttcgttcag atcttcgcga atgcaggatt
     9841 ccagcgacgc catctcaata gtgttgtcct gcttggtgac gccgatgcgt ttgcagaact
     9901 cacgaataga agccgcggta tagccgcgac ggcgcagacc ggaaatagtc ggcatacgcg
     9961 gatcatccca accttcgacg tgtttgtcgg tcaccagcag gttcagctta cgcttggaca
    10021 tcacggtgta ttccagattc aggcgcgaga attcgtactg gcgcgggtga accggaatgg
    10081 tgatgttgtc cagcacccag tcgtacagac gacggttgtc ctggaactcc agcgtacaca
    10141 gagaatgagt aatgccttcc agcgcatcgc tgatgcagtg agtaaagtcg tacatcggat
    10201 agatgcacca cttcgtgccg gtctgatgat gctcggcgaa tttaatgcga tacagcaccg
    10261 gatcgcgcat cacgataaac ggcgacgcca tgtcgatttt agcgcgcaga caggctttac
    10321 cctcttcaaa accgccggta cgcatttttt caaatagcgc gaggttttct tccacgctgc
    10381 gatcgcggaa cgggctgttt ttacccggcg cggtcagcgt accacggtat tcgcggatct
    10441 gctccggcgt cagctcatca acgtaggcca ggcctttatt gatgagctcg accgcatagg
    10501 cgtgcagttg gtcaaagtaa tcggaggagt agcgaatatc gccagaccag tgaaagccta
    10561 accactcgac gtcgtttttg atcgaatcaa cgtactcgat atcttctttt accgggttgg
    10621 tgtcatcgaa acgcaggttg cactggccct gataatcttg cgcgatgcca aagttcaggc
    10681 agatagattt cgcgtggccg atgtgcagat agccattcgg ctccggcgga aaacgggtat
    10741 ggacagtggt atgtttacca ctcgccagat cttcatcaat aatctgacga ataaagttag
    10801 tcgggcgggc ttcagcctca ctcatcgtgg attcctcaaa gcgtaaacaa cgtataacgg
    10861 catatgatct tataagccgg acagactgac aacctttagt tacttaaaaa gtggctttgc
    10921 agaaaatatt ggggctaatt gcggtaaaaa aaagcggcga aggtttccct ctgccgctta
    10981 tgtttcctgt gatatcgccg gatggcgtct tacgccttat ccggccagga agcgattatt
    11041 tgctcttgat ctcgtacagc ggcgtttgac ccgctaccac gtgaccatcc gctttgatga
    11101 ccagagcgct gaagtcatcg ctgttgctgc aaacaaccgg gcttatcttg gaacgcgcat
    11161 tggcattcag gaagtccaga tccagttcca gaaccggctg acccgccgtg acttccgcac
    11221 cctcttctac cagacgcttg aagccctgac cgttcagcgc gacggtatcg atacccatat
    11281 ggacaacgat ctccgcgcct ttttcggttt ccagacagaa cgcgtggtta gtgttgaaga
    11341 ttttcacgat agtacccgcc gccggagaaa ccacggtttt atcggtgggt ttcaccgcca
    11401 cgccgtcgcc gaccgctttg ctggcgaaag cttcatccgg tacctgatcc agcgccacta
    11461 cctcaccggt aatcggagag accagttcag cgatagtcac cgcattcggc accgcctggg
    11521 gtttggccgc cggagcag
//
LOCUS       DAGWFR010000126        11508 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.128, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000126 DAGWFR010000000
VERSION     DAGWFR010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 11508)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11508)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11508
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.128"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..399)
                     /locus_tag="MOX77_003354"
     CDS             complement(<1..399)
                     /locus_tag="MOX77_003354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HCA3358794.1"
                     /translation="MSAIEVTNLVKKFHGQTVLHGIDLEVKPGEVVAIIGPSGSGKTT
                     LLRCINLLEQPEAGTIKVGDIIIDTARPFSQQKGLIRQLRQHVGFVFQSFNLFPHRTV
                     LENIIEGPVIVKGEPKAEATALARELLAKVG"
     gene            complement(396..1064)
                     /gene="tcyL"
                     /locus_tag="MOX77_003355"
     CDS             complement(396..1064)
                     /gene="tcyL"
                     /locus_tag="MOX77_003355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystine ABC transporter permease"
                     /protein_id="HCA3358795.1"
                     /translation="MQESIQLVIESLPYLLKGAVFTLQLSIGGMFFGLLLGFVLALMR
                     MSPLWPVRWLARFYISIFRGTPLIAQLFMIYYGLPQFGIELDPIPAAMIGLSLNTAAY
                     TSETLRAAISAIDKGQWEAAASIGMTPWQTLRRAILPQAARVALPPLSNSFISLVKDT
                     SLAATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSALQNYFENQLNRQE
                     REPK"
     gene            complement(1085..2071)
                     /gene="dcyD"
                     /locus_tag="MOX77_003356"
     CDS             complement(1085..2071)
                     /gene="dcyD"
                     /locus_tag="MOX77_003356"
                     /EC_number="4.4.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-cysteine desulfhydrase"
                     /protein_id="HCA3358796.1"
                     /translation="MPLHHLTRFPRLELIGAPTPLEYLPRLSDYLGREIYIKRDDVTP
                     IAMGGNKLRKLEFLVADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENP
                     IGTTAENYLTNGNRLLLDLFNTQIEMCDALTDPDAQLQTLATRIEAQGFRPYVIPVGG
                     SSALGAMGYVESALEIVQQCEEVVGLSSVVVASGSAGTHAGLAVGLEHLMPDVELIGV
                     TVSRSVAEQKPKVIALQQAIAGQLALTATADIHLWDDYFAPGYGVPNDAGMEAVKLLA
                     NLEGVLLDPVYTGKAMAGLIDGISQKRFNDDGPILFIHTGGAPALFAYHPHV"
     gene            complement(2225..3025)
                     /gene="tcyJ"
                     /locus_tag="MOX77_003357"
     CDS             complement(2225..3025)
                     /gene="tcyJ"
                     /locus_tag="MOX77_003357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystine ABC transporter substrate-binding
                     protein"
                     /protein_id="HCA3358797.1"
                     /translation="MKLALLGRQALMGVMAVALVAGMSAKSFADEGLLNKVKERGTLL
                     VGLEGTYPPFSFQGDDGKLTGFEVDFAEALAKHLGVKASLKPTKWDGMLASLDSKRID
                     VVINQVTISDVRKKKYDFSTPYTVSGVQALVKKGNEGTIKTAADLQGKKVGVGLGTNY
                     EEWLRQHVQGVDIRTYDDDPTKYQDLRVGRIDAILVDRLAALDLVKKTKGTLAVTGDA
                     FSRQESGVALRKGNEDLLKAVDNAIAEMQKDGTLKALSEKWFGADVTQ"
     gene            complement(3172..3723)
                     /gene="fliZ"
                     /locus_tag="MOX77_003358"
     CDS             complement(3172..3723)
                     /gene="fliZ"
                     /locus_tag="MOX77_003358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis regulatory protein FliZ"
                     /protein_id="HCA3358798.1"
                     /translation="MTVQQPKRRPLSRYLKDFKHSQTHCAHCHKLLDRITLVRRGKIV
                     NKIAISQLDMLLDDAAWQREQKEWVALCRFCGDLHCKKQSDFFDIIGFKQYLFEQTEM
                     SHGTVREYVVRLRRLGNYLSEQNISHDLLQDGFLDESLAPWLPETSTNNYRIALRKYQ
                     QYKAHQQIAPRQKSPFTASSDIY"
     gene            complement(3782..4501)
                     /locus_tag="MOX77_003359"
     CDS             complement(3782..4501)
                     /locus_tag="MOX77_003359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor FliA"
                     /protein_id="HCA3358799.1"
                     /translation="MNSLYTAEGVMDKHSLWQRYVPLVRHEALRLQVRLPASVELDDL
                     LQAGGIGLLNAVDRYDALQGTAFTTYAVQRIRGAMLDELRSRDWVPRSVRRNAREVAQ
                     AMGQLEQELGRNATETEVAERLGIPVAEYRQMLLDTNNSQLFSYDEWREEHGDSIELV
                     TEEHQQENPLHQLLEGDLRQRVMDAIESLPEREQLVLTLYYQEELNLKEIGAVLEVGE
                     SRVSQLHSQAIKRLRTKLGKL"
     gene            complement(4698..5902)
                     /gene="fliB"
                     /locus_tag="MOX77_003360"
                     /pseudo
     CDS             complement(4698..5902)
                     /gene="fliB"
                     /locus_tag="MOX77_003360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460911.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin lysine-N-methylase"
     gene            complement(5981..7501)
                     /locus_tag="MOX77_003361"
     CDS             complement(5981..7501)
                     /locus_tag="MOX77_003361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000079739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FliC/FljB family flagellin"
                     /protein_id="HCA3358800.1"
                     /translation="MAQVINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDD
                     AAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANG
                     TNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDL
                     KEISSKTLGLDKLNVQDAYTPKETAVTVDKTTYKNGTDPITAQSNTDIQTAIGGGATG
                     VTGADIKFKDGQYYLDVKGGASAGVYKATYDETTKKVNIDTTDKTPLATAEATAIRGT
                     ATITHNQIAEVTKEGVDTTTVAAQLAAAGVTGADKDNTSLVKLSFEDKNGKVIDGGYA
                     VKMGDDFYAATYDEKTGAITAKTTTYTDGTGVAQTGAVKFGGANGKSEVVTATDGKTY
                     LASDLDKHNFRTGGELKEVNTDKTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITN
                     LGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQANQVPQNVLSLLR"
     gene            7758..9161
                     /gene="fliD"
                     /locus_tag="MOX77_003362"
     CDS             7758..9161
                     /gene="fliD"
                     /locus_tag="MOX77_003362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar filament capping protein FliD"
                     /protein_id="HCA3358801.1"
                     /translation="MASISSLGVGSNLPLDQLLTDLTKNEKGRLTPITKQQSANSAKL
                     TAYGTLKSALEKFQTANTALNKADLFKSTVASSTTEDLKVSTTAGAAAGTYKISVTQL
                     AAAQSLATKTTFATTKEQLGDTSVTSRTIKIEQPGRKEPLEIKLDKGDTSMEAIRDAI
                     NDADSGIAASIVKVKENEFQLVLTANSGTDNTMKITVEGDTKLNDLLAYDSTTNTGNM
                     QELVKAENAKLNVNGIDIERQSNTVTDAPQGITLTLTKKVTDATVTVTKDDTKAKEAI
                     KSWVDAYNSLVDTFSSLTKYTAVEPGEEASDKNGALLGDSVVRAIQTGIRAQFANSGS
                     NSAFKTMAEIGITQDGTSGKLKIDDDKLTKVLKDNTAAARELLVGDGKETGITTKIAT
                     EVKSYLADDGIIDNAQDNVNATLKSLTKQYLSVSNSIDETVARYKAQFTQLDTMMSKL
                     NNTSSYLTQQFTAMNKS"
     gene            9176..9583
                     /gene="fliS"
                     /locus_tag="MOX77_003363"
     CDS             9176..9583
                     /gene="fliS"
                     /locus_tag="MOX77_003363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar export chaperone FliS"
                     /protein_id="HCA3358802.1"
                     /translation="MYTASGIKAYAQVSVESAVMSASPHQLIEMLFDGANSALVRARL
                     FLEQGDVVAKGEALSKAINIIDNGLKAGLDQEKGGEIATNLSELYDYMIRRLLQANLR
                     NDAQAIEEVERLLSNIAEAWKQISPKASFQESR"
     gene            9583..9951
                     /gene="fliT"
                     /locus_tag="MOX77_003364"
     CDS             9583..9951
                     /gene="fliT"
                     /locus_tag="MOX77_003364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis regulatory protein FliT"
                     /protein_id="HCA3358803.1"
                     /translation="MTSTVEFINRWQRIALLSQSLLELAQRGEWDLLLQQEVSYLQSI
                     ETVMEKQTPPGITRSIQDMVAGYIKQTLDNEQLLKGLLQQRLDELSSLIGQSTRQKSL
                     NNAYGRLSGMLLVPDAPGAS"
     gene            10023..11507
                     /gene="amyA"
                     /locus_tag="MOX77_003365"
     CDS             10023..11507
                     /gene="amyA"
                     /locus_tag="MOX77_003365"
                     /EC_number="3.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase"
                     /protein_id="HCA3358804.1"
                     /translation="MKNPTLLQYFHWYYPDGGKLWSELAERADGLNDIGINMVWLPPA
                     CKGASGGYSVGYDSYDLFDLGEFDQKGTIATKYGDKRQLLTAIDALKKNNIAVLLDVV
                     VNHKMGADEKERIRVQRVNQDDRTQIDDNIIECEGWTRYTFPARAGQYSNFIWDYHCF
                     SGIDHIENPDEDGIFKIVNDYTGDGWNDQVDDELGNFDYLMGENIDFRNHAVTEEIKY
                     WARWVMEQTHCDGFRLDAVKHIPAWFYKEWIEHVQAVAPKPLFIVAEYWSHEVDKLQT
                     YIDQADGKTMLFDAPLQMKFHEASRQGAEYDMRHIFTGTLVEADPFHAVTLVANHDTQ
                     LLQALEAPVEPWFKPLAYALILLRENGVPSVFYPDLYGASYEDNGENGETCRVDMPVI
                     NQLDRLILARQRFAHGIQTLFFDHPNCIAFSRSGTEENPGCVVVLSNGDDGEKTLLLG
                     DNYANKTWRDFLGNRSEHVVTNDQGEATFFCNAGSVSVWVIEDV"
BASE COUNT         2880 a         3001 c         2828 g         2799 t
ORIGIN      
        1 cccgactttg gctaacagtt cccgcgccag cgccgtcgcc tcagctttcg gctctccctt
       61 tacaatcacc ggaccttcaa tgatattttc cagcacggta cgatgcggga acaggttaaa
      121 actctgaaag acaaagccga catgctgacg tagctggcga atcaaccctt tttgctggct
      181 gaatgggcgg gcggtatcga tgataatatc gcctacttta atggtgcccg cttccggttg
      241 ttccagcagg ttaatacagc gtaataacgt tgtcttccct gagccgctcg ggccgataat
      301 ggcgacgact tctccgggct tcacctcaag gtcgataccg tgcagcaccg tttgaccatg
      361 aaattttttg accaggttgg tgacttcgat agcactcatt ttggctctct ctcctggcgg
      421 ttaagctggt tttcgaaata gttttgcagt gccgataaga cggtcgccat tacccagtag
      481 attaacgacg cggccagata catggtaaac acctccagcg ttcgcgaggt aattaactgc
      541 gcctggcgga acaactccgg cacctgaatc gtcgcggcga gcgatgtatc tttcaccagg
      601 ctgataaagc tgttgctcaa cggcggaagc gcgacgcggg ccgcctgcgg caaaatagcg
      661 cggcgtagcg tttgccacgg cgtcatgcca atgctcgccg ccgcttccca ttgtcccttg
      721 tcgatagccg agatcgccgc gcgcagcgtc tcggacgtgt aagccgcggt attgagcgat
      781 aaaccaatca tcgccgccgg gatagggtcc agctcaatac caaattgcgg caggccgtaa
      841 tagatcataa ataactgggc gataagcggc gtaccgcgaa aaatcgagat ataaaagcgc
      901 gccagccagc gaaccggcca tagcggagac atccgcatca gcgccagcac aaatcccagc
      961 agcagaccaa aaaacatacc gccaatactc agttgcaggg taaagacggc gcctttaagc
     1021 aaatacggca gcgattcaat aaccagttgg atactttctt gcattcgcgt tgattacctg
     1081 gaggttatac atgaggatgg taggcaaaca gcgcaggcgc cccaccggta tgaataaaga
     1141 gaatcggccc gtcatcgtta aagcgtttct ggctgatgcc atctatcaga cccgccatcg
     1201 ctttaccggt atataccgga tccagcagca ccccctccag gttcgccagc agtttcaccg
     1261 cctccatccc cgcgtcattt ggcacgccgt aacccggggc aaaatagtca tcccataaat
     1321 gaatatccgc cgtcgccgtc agcgccagct ggccggcaat agcctgctgc aaggcaatca
     1381 ctttgggttt ctgctcggcg acagaacgtg aaacggtcac gccaatcagt tcgacatccg
     1441 gcatcagatg ttccagcccg acagctaacc cggcgtgcgt tccggcgctg ccggaggcca
     1501 ccaccaccga agagagcccg acgacctctt cacactgctg gacgatctcc agggcgctct
     1561 ctacgtatcc cattgcgccc aacgcgctgg agccgccgac cggaatcaca tagggcctga
     1621 acccttgcgc ttcaatgcgc gtcgccagcg tttgcagctg cgcatccgga tcggttagcg
     1681 catcgcacat ctcaatttgt gtattaaata aatccagtaa caggcgatta ccattcgtca
     1741 ggtaattttc cgcggtggta ccgattggat tttccagcaa ggcgacgcaa tgcagcccca
     1801 atttggccgc aaccgccgcc gtctgacgga catggtttga ctgaatcgcc cctgcggtta
     1861 tcagcgtatc cgccccttct cgcagcgcgt cggccactag aaactccagc ttacgcagtt
     1921 tattgccgcc cattgcaatg ggcgtaacgt catcgcgctt aatgtaaatc tcacggccaa
     1981 gataatcaga caatcgcggc aggtattcga gcggggtcgg cgcgccaata agctccaggc
     2041 gaggaaagcg cgttaagtga tgtagtggca ttgagcctcc ggtaacgttg tggtgtgttc
     2101 tttttattat gcacgttgat ctaatggaaa taaaaaaggc gccgattcac gcgcctccgt
     2161 ttgctgacat agtatgaggt tgatattgcc cggcggcgca ctacctgccg ggcaacgtag
     2221 agcattattg ggtcacgtca gcgccaaacc atttttcgga gagcgctttt aaggtgccat
     2281 ctttttgcat ttccgcaatg gcattatcta ccgccttcag caaatcttcg ttgcctttac
     2341 gtaacgcaac gccggactcc tgacgcgaaa acgcatcacc ggtgacggcc agcgtacctt
     2401 tggttttttt caccagatcc aacgccgcca gacgatcgac taaaatcgcg tcaatacggc
     2461 ctacgcgcag atcctgatat tttgtaggat catcgtcata ggtgcggata tccacgccct
     2521 gaacatgttg acgtagccac tcttcatagt tagtccccag cccaacgccg acttttttgc
     2581 cctgcagatc ggccgccgtt ttgatcgtgc cttcattgcc ttttttcacc agcgcctgaa
     2641 cgccggagac agtataaggc gtagagaaat catatttttt cttgcggacg tctgaaatcg
     2701 tgacctggtt tatcactaca tcaatgcgtt tagagtccag cgacgccagc attccgtccc
     2761 atttggtcgg cttcaacgac gctttaacgc ccagatgttt tgccaacgcc tcggcgaaat
     2821 cgacttcaaa accggttaat ttgccgtcgt cgccctgaaa gctaaacggc ggataggtac
     2881 cttccagccc taccagcagc gtgccgcgtt ctttaacttt gttcagcaaa ccctcatcgg
     2941 caaagctctt cgcgctcatt cccgccacca gcgctacagc cattactccc atcagtgcct
     3001 gacgtcccag cagtgctaat ttcatagtaa ccccgaatat tgccgttaat gaccatagac
     3061 tgtgtcccgc catggcgcat cgtcacgtct cgcgaacctt tgggggactc agcctaatgt
     3121 agaaggtttg ccacgtttca ccaacacgac tctgctacat cttatgcttt tttaatatat
     3181 atcagaactg gcggtaaagg gggatttctg tctgggcgca atctgctgat gcgctttata
     3241 ttgctggtat ttacgcagtg cgatacggta attattggtg ctggtttccg gcaaccatgg
     3301 cgccaggctt tcatcgagaa aaccgtcctg cagcagatcg tgggaaatgt tttgctcgct
     3361 gaggtaattg ccaagacgtc gtaaacgcac gacatattcc cgcaccgtgc catggctcat
     3421 ctcggtttgt tcaaacaaat actgcttgaa accgataata tcgaaaaaat cactctgctt
     3481 tttgcagtgc aaatcgccgc aaaagcgaca caacgccacc cactccttct gctcccgctg
     3541 ccaggcagcg tcgtcaagta gcatatccag ctgtgaaata gcgattttat taacgatctt
     3601 gccacggcga accagcgtaa tgcggtcgag caatttgtga caatgcgcgc aatgcgtctg
     3661 gctgtgttta aagtctttaa gatagcggct caagggccgc cttttaggtt gctgcaccgt
     3721 catgagaact cctggtagtc tatatgttgt gcggcacttt tcgggtgcga tcatgcgcta
     3781 cctataactt acccagtttg gtgcgtaatc gtttgatggc ctgactatgc aactggctga
     3841 cccgcgattc gccgacttcc agtaccgcgc caatctcttt gagattgagc tcttcctggt
     3901 aatacagcgt taacaccagt tgctcgcgtt ccggcagcga ttcaatcgca tccattaccc
     3961 gctgtcgcag gtcgccctcc agcagttgat gtaacgggtt ttcctgttga tgttcttcag
     4021 tcaccagttc gatgctatcg ccatgctctt cccgccactc atcgtaagag aaaagttggc
     4081 tgttgttggt atcgagcaac atctgacgat actccgcaac agggatgcca agacgttccg
     4141 ccacttcggt ttccgtcgca ttacgcccca gttcctgctc cagttgtccc atcgcctgcg
     4201 ccacttcgcg ggcattacgc cggacgctac gcggcaccca atcgcggctg cgtaattcat
     4261 ccagcatcgc cccacgaata cgctgcactg cgtaagtggt aaatgccgtt ccttgcaaag
     4321 cgtcatatcg gtcgaccgca tttaataacc cgatgccgcc cgcttgtagc agatcgtcca
     4381 gttccacgct cgccggcaat cgcacctgca ggcgcaatgc ttcgtgacgc accagcggta
     4441 cataacgctg ccacagcgag tgtttatcca ttacaccttc agcggtatac agtgaattca
     4501 cgataaacag ccctgcgtta aatgagttat cggcatgatt atccgtttct acagagggtt
     4561 ctatcgaagg aataaggcta taaaagaagg gttatttcac ttatgtaacc tgtagcgcct
     4621 ttttagcggt tcaaagagca gaataaaatc agccagatag gataaacggg atgcgcaaaa
     4681 gcccaccccg aacaaaacta tgtcagaaga tgaatcatcg acagatcgtc gccagtacgc
     4741 accgtttcta tatggcgatg aaaattcgcc gccacctcgc tgttatgctg gctgcgggag
     4801 tgaaagctat acacaatatt ggtaacgtca tcccactcaa gccgcccgcg ctcatgcacg
     4861 ctggctgccg ttaatagctt aataaaggca tattccgcca cgataatata cagcgcgcgt
     4921 aacgggtcga cattcggctg gttggggaaa ttattttccc aaattttata gagaattaaa
     4981 tttctgaaag cccagttctt ctgctgctca tccgcctgta aacagcgcgc taatgaggac
     5041 tcaatatcgc taaccttctg ctccattgaa acgccctctt ccgccgtcag cacccgcaga
     5101 agacactgga tatagtgatc gaggataaca ctgccacgac taagcgggag cgagcggaaa
     5161 tagttctgca tctgcaatac cagcgaggtt tttaccttgc tgtccggcgc gatattcatc
     5221 aattcctgcg ccagcacgcc ggtctgcaac tgctcaagta acgcggcata cacctgttcc
     5281 agttcaccca gcgcggcatc atcaattttg gcaaatttat gtgcatacat gacgaattta
     5341 atcaacccat agagcgccgt ttccgtactg ctgttggcat ggttgatcag actcaggcaa
     5401 aacagattga gtaacttttg ctgcggtgag aataacggcg cagtattgaa tgtctgctga
     5461 atgattgttt tttcgccgag cgccattgcg tcaggatcgt ttaaaatgcg ggacgttacc
     5521 tccggacagg caagactcag ggagttacgt acctcatttt tataggtatg gtgcgcccgt
     5581 gggaaagagg aacaggtatg acttaatgcc tttgcgccta acgtttttgt acccggcaca
     5641 aacggtcctc atccagataa gggcaacttc ccagcgccga aggcagttta atttcccccc
     5701 aatgattatt gttctttttc agcagaataa tatggtcttg cgcgatggta cgaatcgtcg
     5761 tgtctttact ggcgagatac tttttaaccg tcgtcttatc cagcgtgatt ttccagccct
     5821 tacaacaatg gtcgcgacag gccgagccag aacaggaaaa gcgggtgaca aaggcaggtt
     5881 cagtgacggt gatttctttc attacacagg ctccggaatt aaaaaaggca gctttcgctg
     5941 ccttgattgt gtaccacgtg tcggtgaatc aatcgccgga ttaacgcagt aaagagagga
     6001 cgttttgcgg aacctggttc gcctgcgcca gaacggaggt accggcctgc tgcagaatct
     6061 gcgcgcgaga catgttggag acttcggttg cgtagtcgga atcttcgata cggctacggg
     6121 cagaagacag gttatttacg gtattgccca ggttggtgat agcggagttg aaacggttct
     6181 gaaccgcacc caggtcagaa cgaagtgtat caacctgtgc caaggcagca tcaattttct
     6241 gcagtgggtt ttcagtctta tctgtattaa cctctttaag ctcaccgcct gttctgaagt
     6301 tatgtttgtc aaggtcgctt gctaagtaag tcttaccatc ggtagcagta acaacttcag
     6361 atttaccatt tgcgccacca aatttcacag ctccagtttg agcaacgcca gtaccatctg
     6421 tataagtagt ggttttagca gtaattgcac ctgttttctc atcatatgta gcggcataga
     6481 aatcgtcgcc cattttcact gcatagccac catcaataac cttaccgttt ttatcctcaa
     6541 acgatagttt tacaaggcta gtattgtcct tatcggcgcc agtaacccct gctgcagcaa
     6601 gttgagccgc aactgtggtc gtatcaacac cctcttttgt tacttcagca atttggttgt
     6661 gggttatagt ggccgttccc cgaatagctg tagcttccgc agttgccaac ggagttttat
     6721 cagtcgtatc aatattaact ttctttgtag tttcatcata agtggcttta taaacaccag
     6781 cagaagcacc gcctttaaca tctaaatagt attgaccatc tttaaatttg atatcagccc
     6841 cagtaacccc cgttgcacca ccgccaattg cagtttggat atcagtattg ctctgggctg
     6901 taataggatc tgtaccattt ttataggtag ttttatcaac ggttacagca gtttctttcg
     6961 gggtgtaggc atcttggaca ttaagcttat caagtcccag tgttttagag ctgatttctt
     7021 ttaaatcaat atcgatagtt tcaccgtcgt tggcaccaac ctggatggtc agggtgttgt
     7081 cctgcgccag gactttcacg ccgttgaact gagtctggcc ggatacacgg tcgatttcgt
     7141 tcaggcgctg ggtgatttca gcctggatgg agtcgaggtc agactgggag ttagtaccat
     7201 tcgcagactg aaccgccagt tcacgcacac gctgcaggtt gttgttgatt tcgttcagcg
     7261 cgccttcagt ggtctgcgca atggagatac cgtcgttagc gttacgggaa gcctgagtca
     7321 gacctttgat gttcgcggta aaacggttag caatcgcctg tcctgccgca tcgtctttcg
     7381 cgctgttgat acgcagaccg gaagacaaac gctcgatagc agtgcccagt gcggactggg
     7441 atttgttcag gttattctgg gtcaacagcg acaggctgtt tgtattaatg acttgtgcca
     7501 tgatcttttc cttatcaatt acaacttgat gttattgggc tgttgcccac ggtttctcac
     7561 cgtaaccctt gtatcggcac ctgaatttcg aactttagaa aatttttcac ttcccccgat
     7621 ctttttctta ggcggcgaaa tagccgcttt atgcatcatt attccgcgca ttatttttgc
     7681 aaaattatca ttaaactttg cctccagatt gccgataacg cgcttaacta ctgtttgcaa
     7741 tcaaaaagga agaaggcatg gcttcaattt catcattagg tgtgggatca aacttaccgt
     7801 tagaccagtt gttgacagac ctgacaaaga acgaaaaagg acgcttaacg ccaattacca
     7861 aacagcagag cgcgaattcg gcaaagctaa ccgcctatgg cacattgaaa agcgcattag
     7921 aaaaattcca gacggcaaat accgcgttaa ataaagcgga tttatttaag tctaccgtgg
     7981 cgtccagcac gacagaggac ctcaaagtca gtactaccgc aggcgctgcc gcagggactt
     8041 ataagattag cgtaacccag cttgccgccg cgcagtcgct ggcgacaaaa accaccttcg
     8101 caaccaccaa agagcagttg ggcgatacgt cggtcacatc ccggacaatt aaaattgaac
     8161 agccgggacg taaagagccg ctggaaatta agctggataa aggcgacacc tccatggagg
     8221 cgatccgtga cgccattaat gacgccgaca gcggtatcgc cgccagtatc gttaaggtca
     8281 aagagaacga attccagttg gtgcttaccg ccaatagcgg taccgacaat acgatgaaga
     8341 tcacggtgga aggcgataca aaacttaacg atctactcgc ttatgacagc accaccaata
     8401 ccggcaatat gcaagagctg gtgaaagcag aaaacgcgaa gctgaacgta aacggcatcg
     8461 acattgagcg tcagagcaat accgtaaccg acgcccctca gggaattaca ctcaccctga
     8521 ccaagaaagt gaccgacgcg accgtgacgg tgacgaaaga tgataccaag gcgaaagagg
     8581 cgattaaatc ctgggtggat gcctataact cgctggtgga tacttttagc tcattaacta
     8641 aatataccgc cgttgagccg ggcgaagaag ccagcgataa aaacggcgcg ctgttaggcg
     8701 atagtgtggt tcgtgctatc cagaccggga ttcgggcaca atttgccaat agcggcagta
     8761 attctgcgtt caaaacaatg gcggaaattg gcatcaccca ggatgggact tccggcaaac
     8821 tgaagattga cgatgataag ctgaccaagg tactgaaaga taacacggcc gcagcgcgtg
     8881 agctgctggt aggcgatggt aaagaaacgg gtatcaccac caaaattgcc accgaagtga
     8941 aaagttatct ggcggatgac ggcattattg ataatgcgca ggacaacgtt aacgccacgc
     9001 tgaaaagcct gacaaaacag tacctgtccg ttagcaacag catcgatgaa accgttgccc
     9061 gttacaaggc ccagtttacc caactggata ccatgatgag taagctgaat aacaccagta
     9121 gttatttgac ccagcaattt acagctatga acaagtcctg ataacagagg tcaccatgta
     9181 caccgcgagc ggtatcaaag cttatgcgca agtcagcgtg gaaagcgccg tgatgagcgc
     9241 cagcccgcat cagttgattg aaatgttgtt tgatggcgcg aatagcgctc tggtgcgcgc
     9301 tcgcctgttt ttagaacaag gcgatgttgt cgcgaaaggt gaagcgttaa gcaaagccat
     9361 caatattatc gataacgggc tgaaagccgg cctcgatcag gaaaaaggcg gtgagattgc
     9421 gacgaatctt tccgagctat acgactatat gattcgccgt ttactgcagg ctaatttgcg
     9481 taacgacgct caggccatcg aagaagtgga aaggttactc agcaatattg cagaagcctg
     9541 gaagcagatt tcaccgaaag catctttcca ggagtctcgt taatgacctc aaccgtggag
     9601 tttatcaacc gttggcagcg tattgcgctg ctcagtcaat cgctgcttga acttgcgcag
     9661 cgaggtgaat gggatctctt actgcaacaa gaggtctcct atctgcaaag tattgaaacg
     9721 gtgatggaaa agcaaactcc accgggcatt acgcgaagta ttcaggatat ggtcgccgga
     9781 tacatcaaac aaacgctgga taatgagcag ctcctgaaag ggctgctgca acagcgactg
     9841 gatgaactga gtagtttgat cggacaatcc acccgccaaa aatcactcaa caacgcttat
     9901 ggccgtcttt ccggtatgtt actcgtgcca gacgcacctg gcgcctcata atattttccc
     9961 gtctcgtatg aaaattcttc catactccag aggtcggcta aacgacttct ggagcacgga
    10021 agatgaaaaa ccccacgtta ttgcagtact tccactggta ttatcccgac ggaggaaaac
    10081 tctggtctga gctggcggaa cgtgctgatg ggctgaatga tatcggtatc aatatggtct
    10141 ggctaccgcc cgcctgtaaa ggcgcctccg gcggctattc cgtaggctat gatagctacg
    10201 acctgtttga cctcggcgaa tttgaccaaa aaggaactat cgcgacaaag tacggcgata
    10261 aacgccagtt actgacggcg atagacgcgc tcaaaaaaaa taatattgcg gtgctgctcg
    10321 acgtcgtcgt gaaccacaaa atgggcgcag acgaaaaaga acgtattcgc gttcagcgcg
    10381 tgaatcagga tgaccgcacg caaattgatg acaacatcat tgaatgcgaa ggctggacgc
    10441 gctacacctt ccctgcccgc gcgggccagt attccaactt tatttgggac tatcactgtt
    10501 tcagcggcat tgatcacatc gagaatcccg acgaagacgg catttttaag atcgtcaatg
    10561 actataccgg cgatggctgg aacgatcagg ttgatgatga gctgggtaat ttcgactatc
    10621 tgatggggga aaatatcgat tttcgcaatc acgcggttac ggaagagatt aaatattggg
    10681 ctcgttgggt catggaacaa acccattgtg acggctttcg cctggacgcg gtaaaacata
    10741 tacccgcctg gttttataaa gaatggattg agcatgtaca ggcggttgcg ccaaaaccgc
    10801 tgtttattgt cgcagaatac tggtcgcatg aagtggataa actgcaaacg tacatcgatc
    10861 aggccgacgg gaaaaccatg ctgttcgacg cgccgttgca gatgaaattt catgaagcct
    10921 cgcgccaggg cgcggagtat gacatgcgcc acattttcac cggcacgctg gtagaagccg
    10981 acccttttca tgcggtgacg ctggtcgcta accacgatac acaactgtta caggcgctgg
    11041 aagcgccggt agaaccctgg ttcaaaccat tggcctatgc gctgatcctg cttcgtgaaa
    11101 acggcgtacc gtcggtgttt tatcccgatt tatacggcgc cagctatgag gataacggcg
    11161 aaaatggcga gacctgtcgg gtcgacatgc cggtgattaa ccaactggat cggctgatcc
    11221 tcgctcgtca gcgttttgcg cacggtatac aaacactctt tttcgatcat cccaactgta
    11281 tcgcctttag tcgcagcggt actgaagaga atccaggctg tgtggtcgta ctttccaatg
    11341 gcgacgacgg tgaaaaaacc ctcctgctcg gcgacaatta cgctaacaag acctggcgtg
    11401 attttctggg aaaccgcagt gagcatgttg taactaatga tcaaggcgaa gcgacgttct
    11461 tctgcaacgc aggcagcgtc agcgtgtggg tcattgagga cgtgtgat
//
LOCUS       DAGWFR010000127        11447 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.129, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000127 DAGWFR010000000
VERSION     DAGWFR010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 11447)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11447)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11447
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.129"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..724)
                     /locus_tag="MOX77_003366"
     CDS             complement(<1..724)
                     /locus_tag="MOX77_003366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-3B C(17)-methyltransferase"
                     /protein_id="HCA3358805.1"
                     /translation="MLSVIGIGPGSQAMMTMEAIEALQAAEIVVGYKTYTHLVKAFTG
                     DKQVIKTGMCKEIERCQAAIELAQAGHNVALISSGDAGIYGMAGLVLELVSKQKLDVE
                     VRLIPGMTASIAAASLLGAPLMHDFCHISLSDLLTPWPVIEKRIVAAGEADFVICFYN
                     PRSRGREGHLARAFDLLAASKSAQTPVGVVKSAGRKKEEKWLTTLGDMDFEPVDMTSL
                     VIVGNKTTYVQDGLMITPRGYTL"
     gene            complement(724..1779)
                     /gene="cbiG"
                     /locus_tag="MOX77_003367"
     CDS             complement(724..1779)
                     /gene="cbiG"
                     /locus_tag="MOX77_003367"
                     /EC_number="3.7.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalt-precorrin 5A hydrolase"
                     /protein_id="HCA3358806.1"
                     /translation="MNTVKPESIALFCLTPGGVALAKRLAAMLPLTCFTSEKLREEGF
                     IPFDGGFANTARQAFTTYTALIFIGATGIAVRVLAPLVNDKFSDPAVVVIDERGQHVI
                     SLLSGHAGGANALTRYLAGMLGADPVITTATDVNEMSALDTLAFQLNARMSDLRTAVK
                     TVNQMLVSHQRVGLWWDAELTEEIGQCDIRGFIPVDDLQRLPELDALICVSLRNDLPE
                     LPVLHWKLVPQRVVAGIGCRRDTPFPLLATLLARQLEAQKLDPLALKAIGSVTLKKGE
                     PGLIQLASCCRVPFKTFTAEALREFEHHFPGSGFVRKTVGVGSVSGPAAWLLSQGQLL
                     GETLREQGVTITLGVSH"
     gene            complement(1760..2533)
                     /locus_tag="MOX77_003368"
     CDS             complement(1760..2533)
                     /locus_tag="MOX77_003368"
                     /EC_number="2.1.1.271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalt-precorrin-4 methyltransferase"
                     /protein_id="HCA3358807.1"
                     /translation="MSETFDPRCVWFVGAGPGDRELITLKGYRLLQQAQVVIYAGSLI
                     NTELLDYCPAQAERYDSAELHLEQIIELMAAGVKAGKTVVRLQTGDVSLYGSVREQGE
                     ELTRRGIDWQVVPGVSAFLGAAAELGVEYTVPEVSQSLIITRLEGRTPVPAREQLEAF
                     ASHQTSMAIYLSVQRIHRVAERLIAGGYPATTPVAVIYKATWPESQTVRGTLADISDK
                     VRDAGIRKTALILVGNFLGKEYHYSRLYAADFSHEYRKA"
     gene            complement(2517..3095)
                     /locus_tag="MOX77_003369"
     CDS             complement(2517..3095)
                     /locus_tag="MOX77_003369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="decarboxylating cobalt-precorrin-6B
                     (C(15))-methyltransferase"
                     /protein_id="HCA3358808.1"
                     /translation="MKDELFLRGENVPMTKEAVRALALSKLELHRASHLIDVGAGTGS
                     VSIEAALQFPSLQVTAIERNPAALRLLDENRQRFACGNIDILPGEAPMTITGKADAVF
                     MGGSGGHLTALIDWAMGHLHPGGRLVMTFILQENLHSALAHLVHIGACRMDCVQLQLS
                     SLTPLGAGHYFKPNNPVFVIACQKEENHVRDI"
     gene            complement(3085..3690)
                     /locus_tag="MOX77_003370"
     CDS             complement(3085..3690)
                     /locus_tag="MOX77_003370"
                     /EC_number="2.1.1.289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalt-precorrin-7 (C(5))-methyltransferase"
                     /protein_id="HCA3358809.1"
                     /translation="MLTVVGMGPAGRHLMTPAALEAIDHADALAGGKRHLAQFPAFGG
                     ERFTLGADIGALLSWIAARRDKGIVVLASGDPLFYGIGTRLVAHFGIEQVRIIPGISA
                     VQYLCAQAGIDMNDMWLTSSHGRCVSFEQLANHRKVAMVTDARCGPREIARELVARGK
                     GHRLMVIGENLAMENERIHWLPVSAVNADYEMNAVVILDER"
     gene            complement(3684..4823)
                     /locus_tag="MOX77_003371"
     CDS             complement(3684..4823)
                     /locus_tag="MOX77_003371"
                     /EC_number="2.1.1.195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalt-precorrin-5B (C(1))-methyltransferase"
                     /protein_id="HCA3358810.1"
                     /translation="MSELSFDAPVWRHGKALRKGYTTGSCATAAAKVAELMVLRQHLI
                     HQVSIVTPSGVTLCLNVESPHIEGQQAIAAIRKDGGDDVDATHGMLIFARVTLNDSGE
                     ITLTGGEGIGTVTRKGVGLPLGSAAINRTPRHTIESAVREAIGPARGADVEIFAPEGE
                     VRAQKTYNSRLGILGGISIIGTTGIVTPMSEESWKRSLSLELEIKRASGLTRVILVPG
                     NHGERFVREQMGVDTQAVVTMSNFVGYMIEEAVRLGFCQIVLVGHPGKLIKIAAGIFH
                     THSHIADARMETLVAHLALLGAPLELLTLVGDCDTTEAAMEHIEAYGFGHIYNHLARR
                     ICLRVMQMLRFTKTPPVCDAILFSFDNHILGSNRPVDEIAKELQC"
     gene            complement(4823..5302)
                     /locus_tag="MOX77_003372"
     CDS             complement(4823..5302)
                     /locus_tag="MOX77_003372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-8X methylmutase"
                     /protein_id="HCA3358811.1"
                     /translation="MHYIQQPQTIEANSFTIISDIIRETRPDYRFASPLHEAIIKRVI
                     HTTADFDWLDILWFSADALEQLCDALRQPCIIYTDTTMALSGINKRLLATFGGECRCY
                     ISDPRVVGVPVGFVGAAESKEALTHSHFPAVAALGRKGGSNVAAAIVNALLYHLREA"
     gene            complement(5313..6272)
                     /locus_tag="MOX77_003373"
     CDS             complement(5313..6272)
                     /locus_tag="MOX77_003373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin biosynthesis protein"
                     /protein_id="HCA3358812.1"
                     /translation="MTILAWCIAWVLDFIIGDPQHWPHPVRWIGRLITFVQRIVRRYC
                     PGDKALRIGGGVMWVVVVGVTWGVAWGVLALAQRIHPWFGWSVEVWMIFTTLAGRSLA
                     RAAQEVERPLRENDLAESRIKLSWIVGRDTSQLQPAQIYRAVVETVAENTVDGIIAPL
                     FFLFLGGAPLAMAYKAVNTLDSMVGYKHEKYRAIGMVSARMDDVANYLPARLSWLLLG
                     IAAGLCRLSGWRALRIGWRDRYNHSSPNCAWSEACVAGALGIQLGGPNNYFGERVDKP
                     WIGDAQRGISVDDISRTIRLMWVASTLALALFIAARCGLSGVA"
     gene            complement(6269..7624)
                     /locus_tag="MOX77_003374"
     CDS             complement(6269..7624)
                     /locus_tag="MOX77_003374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008785142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobyrinate a,c-diamide synthase"
                     /protein_id="HCA3358813.1"
                     /translation="MLAGTGSGCGKTTVTLGLLRLLQKRALRVQPFKVGPDYLDTGWH
                     TAICGVASRNLDSFMLPPPVLNALFCEQMRQADIAVIEGVMGLYDGYGVDPNYCSTAA
                     MAKQLGCPVILLVDGKAVSTSLAAIVMGFQHFDPTLNLAGVIVNRVTSDAHYQLLKNA
                     IEHYCSLPVLGYVPPCDGVALPERHLGLITARESLVNQQSWHDFAATLEQTVDVDALL
                     SLSLLSALPAGMWPERPDNTAGAGLTLALADDEAFNFYYPDNIDLLERAGVNIVRFSP
                     LHDRALPDCQMIWLGGGYPELYAADLAANTAMLKHLRAAHQRGVAIYAECGGLMYLGS
                     TLEDSGGEIHQMANIIPGHSKMGKRLTRFGYCEAQAMQPTLLAVPGEIVRGHEFHYSD
                     FIPETPAVMACRKVRDGRVLQEWTGGWQTGNTFASYLHVHFAQRPEMLQHWLAAARRV
                     L"
     regulatory      complement(7744..7919)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            complement(8245..9159)
                     /gene="pocR"
                     /locus_tag="MOX77_003375"
     CDS             complement(8245..9159)
                     /gene="pocR"
                     /locus_tag="MOX77_003375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="regulatory protein PocR"
                     /protein_id="HCA3358814.1"
                     /translation="MISASALNSELINKIAQDFAQATTGLAVVVVNIHGDEISELFNF
                     TPFCQLMRQHPQHSTRCRMSDRCGGLEASKSDQPCIYRCHAGLTDFSIPLVIAGHLVG
                     FVLCGQVRLSNDVELVNILNVDDRWQADPELLNEFRNVPEMDYSRVIASADLLKLIVE
                     NCLKKQLNFVVIKDNPQQSEANKTTRGPTPHDSKMKKALRYIDAHLSDDLRLEDVASH
                     VYLSPYYFSKLFKKYQGIGFNAWVNRQRMVSARELLCHSDWSIASIARNLGFSQTSYF
                     CKVFRQTYQVTPQAYRQQINENSHPPSI"
     gene            complement(9376..10170)
                     /gene="pduF"
                     /locus_tag="MOX77_003376"
     CDS             complement(9376..10170)
                     /gene="pduF"
                     /locus_tag="MOX77_003376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propanediol diffusion facilitator PduF"
                     /protein_id="HCA3358815.1"
                     /translation="MNDSLKAQCGAEFLGTGLFLFFGIGCLSALKVAGASLGLWEICI
                     IWGLGISLAVYLTAGISGGHLNPAVTIALWLFACFPKQKVLPYIIAQFAGAFGGDLLA
                     YVLYSSLFTEFETAHHMVRGSVESLQLASIFSTYPAAALNVWQAALVEVVITSILMGM
                     IMALTDDGNGIPKGPLAPLLIGILVAVIGASTGPLTGFAMNPARDFGPKLFTWLAGWG
                     NMAMSGGREIPYFIVPIVAPVIGACAGAAIYRYFIGKNLPCNRCKL"
     gene            10695..10979
                     /gene="pduA"
                     /locus_tag="MOX77_003377"
     CDS             10695..10979
                     /gene="pduA"
                     /locus_tag="MOX77_003377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propanediol utilization microcompartment protein
                     PduA"
                     /protein_id="HCA3358816.1"
                     /translation="MQQEALGMVETKGLTAAIEAADAMVKSANVMLVGYEKIGSGLVT
                     VIVRGDVGAVKAATDAGAAAARNVGEVKAVHVIPRPHTDVEKILPKGISQ"
     gene            10976..>11447
                     /gene="pduB"
                     /locus_tag="MOX77_003378"
     CDS             10976..>11447
                     /gene="pduB"
                     /locus_tag="MOX77_003378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005228567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propanediol utilization microcompartment protein
                     PduB"
                     /protein_id="HCA3358817.1"
                     /translation="MSSNELVEQIMAQVIARVATPEQQAIPGQPQPIRETAMAEKSCS
                     LTEFVGTAIGDTLGLVIANVDTALLDAMKLEKRYRSIGILGARTGAGPHIMAADEAVK
                     ATNTEVVSIELPRDTKGGAGHGSLIILGGNDVSDVKRGIEVALKELDRTFGDVYG"
BASE COUNT         2848 a         3281 c         2841 g         2477 t
ORIGIN      
        1 acagcgtgta acctcgcggc gttatcatca gcccatcctg aacataggtc gttttattac
       61 caacgatgac cagactggtc atatctaccg gttcaaaatc catatcgccg agcgtggtca
      121 gccatttttc ctctttctta cgtccggcgg atttcaccac gccaaccggc gtttgcgcgc
      181 ttttactggc ggcaagcagg tcaaacgcgc gcgccagatg cccttcgcgc ccgcggctgc
      241 gcgggttgta aaaacagata acaaagtctg cctctccggc ggcaacgatg cgtttttcaa
      301 taaccggcca cggggtcagc aggtcgctga ggctgatatg gcagaagtca tgcattagcg
      361 gcgcgcccag taaagaggcg gcggcgatgc tggcggtcat gccaggaatg agccgcacct
      421 cgacgtccag tttctgcttg ctcaccagct ccagcaccag tcccgccatg ccgtaaatac
      481 cggcgtcgcc gctgctaatc agcgctacgt tatgcccggc ctgcgccagt tcaatagccg
      541 cctggcagcg ttcaatttcc ttacacatgc cggtcttgat cacctgtttg tcgccggtga
      601 atgctttaac cagatgggta taggttttgt agcccacgac gatttccgcc gcctgaagcg
      661 cctcaatcgc ctccatcgtc atcattgcct gtgagccagg gccaattccg attacgctta
      721 acatcagtgt gaaactccca aagtaatagt gacgccctgt tcgcgcaggg tttcgcctaa
      781 caattgaccc tggcttaata accacgcagc cgggccggat acgctgccaa cgcccaccgt
      841 ttttctgacg aagccagaac cgggaaaatg gtgttcgaat tcgcgcaacg cttcggcggt
      901 aaaggtttta aaaggcacgc ggcagcagga ggcgagctga ataagccccg gctccccttt
      961 tttgagcgtg acgctgccaa tcgcttttaa cgccagcgga tcgagtttct gcgcttcaag
     1021 ctgacgcgcc agtaatgtcg ctaacagggg aaatggcgta tcgcggcgac agccaattcc
     1081 cgccaccacg cgctggggca ccagtttcca gtgcagtacg ggaagctcag ggaggtcatt
     1141 acgcaaagag acgcagataa gcgcatccag ttcaggcaac cgctgcaaat catcaacagg
     1201 gataaaaccg cgaatatcac actggccgat ctcttccgtt agttcggcat cccaccataa
     1261 ccccacacgt tgatgactga ccaacatctg gttaacggtt tttaccgccg ttcgaagatc
     1321 ggacatgcgg gcgttaagct ggaaagctaa ggtgtccaac gcggacatct cattgacatc
     1381 cgttgccgtg gtaatcaccg gatcggcgcc taacattcct gccaggtagc gcgtcaaggc
     1441 attggccccg cccgcatgac cggaaagcag gctaatgaca tgctgaccac gttcatcaat
     1501 gacgaccacc gccggatcgc tgaacttgtc gttcactaac ggcgccagga cacgaacggc
     1561 aatgccggtc gcgccgataa aaataagcgc ggtataagtg gtaaaagcct gccgggcggt
     1621 attagcgaat ccgccatcga agggaataaa tccctcttcc cgcagttttt cactggtaaa
     1681 gcaggttaac ggcagcatcg cggcgagtct ctttgccagc gccacgccgc cgggcgtcag
     1741 gcaaaacaac gcaatggatt caggctttac ggtattcatg gctaaagtcc gctgcataaa
     1801 gtcttgagta gtgatactcc ttacccagaa aattcccgac caggattagc gccgtcttac
     1861 ggatgccagc atcacgtact ttgtcgctaa tatccgctaa cgtgccgcga acggtctggc
     1921 tttccggcca ggtagcctta tagatgactg cgacaggcgt agttgccgga taaccgccgg
     1981 caatgagacg ttccgccacc cgatgaatac gctgaacgga gagataaatc gccatcgacg
     2041 tctggtgact ggcgaacgcc tccagttgtt cgcgcgccgg tactggcgta cgcccttcca
     2101 gacgggtaat aatgagactc tgcgatacct ccggtacggt atattccaca cccagctccg
     2161 ccgcagcgcc gagaaacgcg ctgacgccag gcactacctg ccagtcgata ccacggcggg
     2221 ttaactcttc gccttgctca cgcacggagc cgtacagcga gacatcgccc gtttgcaacc
     2281 gcaccaccgt ttttcccgct ttcacgcccg cggccatcag ctcgataatc tgctcaagat
     2341 gcagttcggc gctgtcgtag cgttctgcct gcgcggggca gtaatccagc agttcggtat
     2401 tgatcagcga accggcatag ataactacct gcgcctgttg cagcaggcgg tagcctttaa
     2461 gcgtgatcag ctcgcgatcg cccggcccgg cgccgacgaa ccatacacag cgtggatcaa
     2521 atgtctctga catggttttc ttccttctga caggctataa caaaaacagg gttgttcggt
     2581 ttgaaatagt gtcccgcccc cagcggcgtt aacgatgaaa gctgaagctg tacacagtcc
     2641 attcggcatg cgccgatgtg cacaagatgc gccagcgcgc tatggaggtt ttcctgcaag
     2701 ataaaggtca tcaccagacg gccaccggga tgcagatggc ccatcgccca gtcaatcagc
     2761 gccgtcagat gcccgccgct gccgcccata aacaccgcat cggctttccc ggttatggtc
     2821 attggcgctt cgccggggag aatatcgata ttgccgcagg caaagcgctg acgattctca
     2881 tcaagcagcc gtagcgcggc aggattacgc tcaatagccg tcacctgcaa cgaaggaaat
     2941 tgcagcgccg cttcaattga gacgcttccc gttcccgccc cgacgtcaat caggtgactg
     3001 gcgcggtgga gctcaagttt cgacagtgcc agcgcccgta ccgcctcttt ggtcattggc
     3061 acgttctcgc cgcgcagaaa aagctcatct ttcatccagg atcaccactg cattcatttc
     3121 atagtcggcg ttgaccgcac tgacgggtag ccagtggatc cgctcatttt ccatcgccag
     3181 attttcacca atcaccatca agcgatgccc tttaccacgc gcgaccagtt cccgcgcgat
     3241 ttcccgcggc ccgcagcggg catccgtgac catcgccact ttgcgatggt tcgccaactg
     3301 ctcgaagctg acgcaacgac cgtggctact ggtcaaccac atgtcattca tatcaattcc
     3361 agcctgtgcg cacagatact gtacggcgct gatgccaggg ataatgcgaa cctgttcgat
     3421 accaaaatgc gccaccaggc gtgtaccgat gccataaaac agcggatcgc cggaggccag
     3481 caccacgatc cctttatccc gacgggcggc aatccatgac aacaacgcgc caatatccgc
     3541 gcccagcgta aatcgttcgc cgccaaacgc cggaaactgc gccaaatgcc gtttaccgcc
     3601 tgccagcgca tcggcgtggt ctatcgcttc cagcgccgca ggcgtcatca aatgccgtcc
     3661 agcgggcccc attcccacga ccgttagcat tgcagctcct tagcaatctc gtcgacggga
     3721 cgattactgc cgagaatatg gttatcaaaa gaaaacagga tggcgtcgca gacaggcggc
     3781 gttttggtaa aacgcagcat ctgcatgact cgcaaacaaa tacgcctggc aagatggtta
     3841 tagatatgcc cgaagccata tgcttcaatg tgctccattg ccgcttcagt ggtatcgcaa
     3901 tcgccgacca gggtgagtaa ctccagcggc gcgcccagta aagctaaatg cgcgaccagc
     3961 gtttccatgc gcgcatcggc gatatggcta tgggtatgaa agatcccggc ggcgattttg
     4021 atcaattttc caggatgacc caccagcact atctggcaaa atcccagccg taccgcctct
     4081 tcaatcatgt agccgacaaa attgctcatg gtgacgaccg cctgtgtgtc gacgcccatt
     4141 tgttcgcgaa caaaccgttc gccgtggttg cccggcacga gtatcacccg cgttaatcct
     4201 gacgcccgtt tgatctccag ttccagcgat agcgagcgtt tccagctttc ttccgacatc
     4261 ggcgtcacaa taccggtagt gccaataatg gaaatgccgc caagaatgcc aagccgcgag
     4321 ttataggttt tctgcgcccg cacttcgcct tccggggcaa aaatctccac atcagcccca
     4381 cgcgccgggc ctatcgcttc gcgcaccgca gattcaatgg tatggcgcgg cgtacgattg
     4441 atggcagcgc tcccgagcgg cagtccaacc cctttacgcg ttaccgtacc aataccttcg
     4501 ccgccagtga gcgtaatctc accgctgtcg ttgagcgtaa cgcgggcaaa aatcagcatc
     4561 ccgtgcgtgg catccacgtc atcgccgcca tctttacgaa ttgcggctat cgcctgctgg
     4621 ccttcaatgt gcggcgactc cacgttcagg catagcgtga cgcccgacgg cgtgacgatg
     4681 gagacctgat gaatcagatg ttgacgtaat accatcagct cggcgacttt tgccgccgcc
     4741 gtcgcgcagg aaccggtggt atatccttta cgtaacgctt taccgtggcg ccagaccggc
     4801 gcgtcaaaag aaagctcgct catcaggcct cccggaggtg atagagcagc gcattgacga
     4861 tagcggcagc cacgttactg ccgcctttac gccctaacgc ggcaaccgcg ggaaaatggc
     4921 tatgggtgag cgcctctttg gactccgccg cgccgacaaa gcctaccggt acgcccacca
     4981 cgcgcggatc gctgatataa cagcgacact cgccgccaaa cgtcgccagt aatcttttat
     5041 taatgccgga cagcgccatc gtggtatcgg tataaataat gcacggttgg cgtagcgcat
     5101 cacaaagctg ctccagcgca tcggcagaga accacaaaat gtccagccag tcgaaatcgg
     5161 cggtggtatg aataacccgc ttgataatgg cctcatggag cggactggcg aaacggtaat
     5221 caggacgcgt ttcgcgaata atgtcgctaa taatggtgaa actgttggcc tcaatggttt
     5281 ggggctgctg gatataatgc atactgtcgt cctcaggcca cgccagataa cccgcaccgc
     5341 gccgcaataa acagcgccag cgccagggtt gaagcgaccc acatcaatcg aatcgttcgg
     5401 gaaatatcgt ccacggaaat accgcgctgc gcgtcgccga tccagggctt gtccacacgc
     5461 tcgccaaagt agttatttgg gccaccgagc tggattccta aggcgccagc cacacacgct
     5521 tccgaccagg cgcaatttgg gctactgtgg ttataacggt cacgccagcc aatacgcagc
     5581 gcccgccaac cactcaggcg acacagtcct gccgcaatgc ccagcaacag ccagctcagt
     5641 cgggcgggca aatagttcgc tacgtcgtcc atacgggcgc tgaccatacc aatcgcccgg
     5701 tatttttcat gtttgtagcc caccattgaa tccagggtat tgacggcttt gtaggccatc
     5761 gccagcggcg cgccgccgag aaagaggaaa aagagcggcg cgataatgcc gtcaacggtg
     5821 ttttctgcaa ccgtttccac cacggcgcga tagatctgcg ctggctgaag ttgcgacgta
     5881 tcgcgcccga cgatccagga gagttttatt cggctttccg caaggtcgtt ctcccgcaac
     5941 ggtcgttcaa cctcctgcgc ggcgcgggcc agagagcgtc cggccagcgt ggtaaagatc
     6001 atccagactt cgacgctcca gccaaaccag gggtgaatcc gctgcgccag cgccagtacg
     6061 ccccatgcca cgccccaggt caccccgaca accacaaccc acattacgcc gccgccaatc
     6121 cgcagcgctt tatcgccggg acaatagcga cgcacaatac gctgcacaaa cgtaattaat
     6181 cggcctatcc agcgtaccgg atggggccag tgttgagggt cgccgatgat aaaatccagc
     6241 acccaggcga tacaccaggc aaggatcgtc ataatactcg cctcgccgcc gccagccagt
     6301 gctgcaacat ttccggacgc tgggcgaaat ggacgtgcag atagctggca aacgtgttgc
     6361 ctgtctgcca gccgccagtc cattcttgta acacgcggcc atcgcgaacc ttacgacagg
     6421 ccataacggc gggtgtttcg gggataaaat ctgagtagtg aaattcatgg ccgcgcacta
     6481 tctcgccagg caccgccaat agcgttggct gcatagcctg cgcctcacag taaccaaagc
     6541 gggtaagtcg cttacccatt ttgctgtgac cggggataat attcgccatc tgatgaattt
     6601 ccccgccgct atcctccaga gtgctcccca gatacatcag accgccacac tccgcgtaaa
     6661 tcgccacgcc gcgctgatgc gccgcccgca aatgttttaa catcgccgta tttgccgcca
     6721 gatccgcggc gtataattca ggatatccac cgcccagcca gatcatctga caatcaggca
     6781 atgcgcggtc atgcagtggg ctaaaacgca caatgttaac gccggcacgc tccagcaaat
     6841 cgatgttatc ggggtaataa aagttaaagg cctcatcatc cgccagagca agcgtcagcc
     6901 ctgcccccgc tgtgttatcg gggcgttcag gccacattcc cgccggaagc gctgataaca
     6961 ggctcagcga gagtagcgca tccacatcca ctgtttgttc cagcgtggcg gcaaaatcat
     7021 gccatgattg ctgattgacg agggattctc tggcggtaat caaccccagg tggcgttcag
     7081 gtaatgcgac gccgtcgcaa ggagggacat accccagtac cggcagtgag caataatgtt
     7141 caatggcatt tttgaggagc tgatagtggg cgtcgctagt gacgcgattc acaatcacgc
     7201 ccgcgaggtt gagggtcggg tcgaagtgct gaaatcccat aacgatagcc gcaagcgacg
     7261 ttgaaacagc cttgccgtcc accagtagga tgaccgggca accaagctgt ttggccatcg
     7321 cggctgtgct gcagtaattg gggtcgacgc catagccgtc atacagcccc atgacgcctt
     7381 caatgacagc gatatccgcc tgccgcattt gttcgcaaaa taaggcgttg agaacaggag
     7441 gaggaagcat gaaactgtca agattacggg acgccacgcc acagatagcg gtatgccagc
     7501 cggtatcaag gtaatctggc ccaactttaa acggctgtac gcgcagcgcg cgtttttgca
     7561 gcagcctcaa caaaccaagc gtcaccgtgg ttttgccgca accgcttcct gtgcctgcaa
     7621 gaataaagcg tgatgccttg ccgccattac cctgatcctg ttcagggtgg taggggtata
     7681 caggtacgcg catgttcagt ctttcgactg tacgcgtctt cgcaacccac ttcccaccga
     7741 agttgttggt tatcaccgac aggcaggtct tctggcttag cgtcctcctc gcccgtcctt
     7801 cccaatcttg cgatcagtgg tctttacggg gtcgtcagca tcacagcagc gggggctgcg
     7861 ggggattttc acccccttcc ctaccacaaa tgtggcaaac ctgttggttt acgttatggc
     7921 tgtacggcac acccataacg gcaattaata atgtgctacg ttttacattt ctgtgagcaa
     7981 tagcctgagc ggttgctcat ctgacgttaa tctactcatc cttaccggta tattgacgat
     8041 aaaacgtatc gacaaagcgt aataaaactt atctttcctg acactgtact tcatcacaaa
     8101 aataaaaact ggtgcagttt atgccctaaa ttttattatt ttgttgcgct atgacaattt
     8161 attgttacac cagataaatt ttctttctga aatgattaag atacaaaaca ctatcaaaaa
     8221 tcggcaatag caaaatattg ctatttatat cgatggagga tgagaattct catttatctg
     8281 ctgacgataa gcctgcggcg taacctgata ggtctggcgg aagactttgc aaaaataact
     8341 ggtttgcgaa aagcctaaat tacgcgcaat actggcaata ctccagtcac tatggcaaag
     8401 caattctctg gcgctaacca ttctctggcg gttcacccac gcattaaatc cgattccctg
     8461 atatttcttg aatagcttac tgaagtaata ggggctgaga tagacatgtg aggcgacatc
     8521 ctcaagacga agatcgtcgg acaaatgcgc atcaatatag cgaagcgctt ttttcatttt
     8581 actgtcatgc ggagtggggc cacgagtggt tttatttgcc tccgattgct gcggattgtc
     8641 tttgataacc acgaaattga gctgtttttt caggcaattc tcaactatca gtttaagaag
     8701 atcggcggaa gcgataacgc gtgaatagtc catctctggc acattccgaa attcattcaa
     8761 gagctcaggg tcagcctgcc agcgatcgtc gacattaaga atgtttacca gctccacgtc
     8821 attacttaaa cgaacctgcc cgcataaaac aaagccaact aaatgccctg cgattaccag
     8881 cggaatagaa aaatccgtta gaccggcatg acaacgataa atacagggtt gatcggactt
     8941 cgatgcctcc agtcccccgc agcgatcgct catacgacaa cgtgtactat gctggggatg
     9001 ctgccgcatc aactgacaaa acggcgtgaa attgaatagc tcagatattt catcaccatg
     9061 aatattgaca accacaaccg ccagaccggt ggtggcttgt gcaaaatcct gtgcgatttt
     9121 attaatgagt tctgagttca gagcgctcgc agaaatcatg ataaaacccc tcagttaatt
     9181 tattgttata aacaaaacac attatttaca ttcacttttt attagcatta tcctggccct
     9241 gataaaaagt acaatgacaa tatcaaaagt ctcccattgc tgggagacgt tttgatcagt
     9301 tcgtgaaagc agatcacgaa attatctcac ctgtttttac gatacatcat tgctgtgaat
     9361 ctggttcgca ttttcttaca gtttacagcg gttacaaggt aaattcttac caataaaata
     9421 gcgatatatg gctgctccag cacaggcgcc gataacaggc gcgacaatcg gcacgataaa
     9481 ataagggatc tctcgcccac cgctcatcgc catgttcccc caccccgcta accatgtgaa
     9541 cagtttggga ccaaaatcac gcgccgggtt cattgcaaaa ccggtaaggg gtccagtaga
     9601 cgcgccgata acggcaacca gtatcccaat aagcaaaggc gcaagcggcc ctttaggaat
     9661 accattgcca tcatccgtca atgccatgat catgcccatc aggatcgacg taatgaccac
     9721 ttccaccaac gcagcctgcc atacatttag cgctgcggcc ggataggtac tgaaaatgct
     9781 ggctaattgc aaactttcga cgctaccgcg caccatatga tgcgcagtct caaattcagt
     9841 aaaaaggcta ctataaagca catacgccag cagatcgccg ccaaaagcgc cggcaaactg
     9901 ggcaataata taaggcaata ctttctgttt ggggaagcag gcaaacagcc acagcgcaat
     9961 cgtcaccgca gggttaagat gtccgccgga gattccggca gtaaggtaaa cggccagtga
    10021 aattccaagc ccccaaataa tgcaaatctc ccataatccg aggctggcgc ctgcgacttt
    10081 gagcgcgctc aaacaaccga taccaaaaaa caaaaagagt ccggtgccta aaaattccgc
    10141 accacattgc gcctttagag aatcattcat gtgacacctt ctgagcaaag ttcgtgtcct
    10201 ggccagcgca agtttcggct ggcggtagag tacagctaac ctcactataa aaagtgccgc
    10261 ctgtaaattg ttggcaacct gcgaacctgt ctcccggaaa aatcgtgttg cgatagcaaa
    10321 attttgcttt tccgatattt ttagcagcct atcatacggg agattcgagc tataaaatac
    10381 gcctgtgaaa ataataaaat attgcacaag ccaacttatc aatttcgaat aagcatcaca
    10441 ttttgcgtct ttcgccatat caaataaaaa tactctcgtc actaacaaaa atgtaaaaat
    10501 gaaataataa aaacaaaata atcatataga caataataaa ttaaatgtaa tttatcaata
    10561 agttataaaa gcaaaagaca atttagtcat attgctttcc cattattttc tgatgctcaa
    10621 cagcaagtca gccattcttt ttcctcgcat cttcttatag tcccaactat cggaacactc
    10681 catgcgaggt ctttatgcaa caagaagcac taggaatggt agaaaccaaa ggcttaaccg
    10741 cagccataga ggccgctgat gcaatggtta agtcagccaa tgtgatgtta gtgggctatg
    10801 aaaagattgg ctccgggctg gtaaccgtca tcgtgcgcgg cgatgttggc gcggtcaaag
    10861 cggccaccga tgcaggtgcc gcagccgcac gcaacgtggg tgaagtgaaa gccgtacacg
    10921 tcatcccacg ccctcacacc gatgtagaaa aaatcttacc gaagggaatt agccaatgag
    10981 cagcaatgag ctggtggaac agatcatggc gcaggtgatt gcccgtgtgg caacgccgga
    11041 acaacaggcc atccctggtc aaccccaacc tatacgagag acggctatgg cagaaaaaag
    11101 ctgcagttta acggaatttg tcgggaccgc cattggcgat acccttggcc tggttatcgc
    11161 caacgtcgat accgccctgc tggacgcgat gaaacttgag aagcgctatc gttccatcgg
    11221 cattctcggc gcccgcaccg gcgcaggccc gcacattatg gcggcggacg aagcggtgaa
    11281 agccaccaac accgaagtgg tcagcattga gctgccgcgc gataccaaag gcggcgcggg
    11341 ccacggttcg ctgattattt taggcggtaa cgacgtttcc gacgtcaagc gcggtatcga
    11401 agtcgcgctg aaagagctgg accgcacctt cggcgatgtt tacggca
//
LOCUS       DAGWFR010000128        11175 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.130, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000128 DAGWFR010000000
VERSION     DAGWFR010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 11175)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11175)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11175
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.130"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            128..322
                     /gene="golB"
                     /locus_tag="MOX77_003379"
     CDS             128..322
                     /gene="golB"
                     /locus_tag="MOX77_003379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gold resistance metallochaperone GolB"
                     /protein_id="HCA3358818.1"
                     /translation="MQFHIDDMTCGGCASTVKKTILTLDANATVRTDPATRLVDIETS
                     LSAEQIAAALQKAGFPPRER"
     gene            613..1866
                     /locus_tag="MOX77_003380"
     CDS             613..1866
                     /locus_tag="MOX77_003380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3358819.1"
                     /translation="MYTPLNWTTTQRHVAFASFTSWMLDAFDFFILVFVLSDLAEWFH
                     ASVSEVSIAIMLTLAVRPIGALLFGRMAEKYGRRPILMLNILFFTVFELLSAWSPTFM
                     AFLIFRVMYGVAMGGIWGVASSLAMETIPDRSRGLMSGIFQAGYPCGYLFASVIFGLF
                     YSMVGWRGMFLIGALPVVLLPYIWFKVPESPVWLAARARKENTALLPVLRKQWKLCLY
                     LVLVMAFFNFFSHGTQDLYPTFLKMQHGFDPHLISIIAIFYNIAAMLGGIFYGTLSER
                     IGRKKAIMIAAFLALPVLPLWAFSSGSFTIGLGAFLMQFMVQGAWGVVPTWLNELVPA
                     NARAVLPGFVYQLGNLLASVNATLQARIAETHGGNYGLAMAIVAGAVAILICVFVAFG
                     RETRGVVISGTDSDALPESAIGHRT"
     gene            2055..4013
                     /locus_tag="MOX77_003381"
     CDS             2055..4013
                     /locus_tag="MOX77_003381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HCA3358820.1"
                     /translation="MLKDNQKHNESVAPNSAFLSELQRALPEFFIADRYNEQGELIAK
                     GGFDLAKFERALKARNIDELTSGYQIDFIGKDYAKKQAGEKSVTVIVPDVEHNTLAEN
                     KNSHNLFLTGDNLDVLRHLQNNYADTVDMIYIDPPYNTGSDGFVYPDHFEYSDRALQD
                     MFGLNDTELARLKSIQGKSTHSAWLSFMYPRLFLARKLLKDTGFIFISIDDNEYANLK
                     LMMDEIFGEGGFVTNVMWKRKKEISNDSDNVSIQGEYILVYAKTGQGALRLEPLSKEY
                     IQKSYKEPTEQFPEGKWRPVPLTVSKGLSGGGYTYKITTPNGTVHERLWAYPEASYQK
                     LVADNLVYFGKDNGGIPQRVMYAHHSKGQPTTNYWDNVASNKEGKKEILDLFGDNVFD
                     TPKPTALLKKIIKLAIDKDGVVLDFFAGSGTTAHAVMALNEEDGGQRTFILCTIDQAL
                     SNNTIAKKAGYNTIDEISRERITRVAAKIRANNPATNSDLGFKHYRFATPTQQTLDDL
                     DSFDIATGHFINTSGQLAAFTESGFTDMINPFSARGLGVPGGASGEETLLTTWLVADG
                     YKMDIDVQTVDFSGYCARYVDNTRLYLIDERWGTEQTRDLLNHIGTHQLPVQTIVIYG
                     YSFDLESIRELEIGLKQLDQKVNLVKRY"
     gene            4023..6994
                     /locus_tag="MOX77_003382"
                     /pseudo
     CDS             4023..6994
                     /locus_tag="MOX77_003382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459353.3"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type III restriction-modification system
                     endonuclease"
     gene            7270..7371
                     /locus_tag="MOX77_003383"
     CDS             7270..7371
                     /locus_tag="MOX77_003383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358821.1"
                     /translation="MLNRYYRFAVEKDDPSEAPESGDKPDSQPQKKS"
     gene            7486..8889
                     /locus_tag="MOX77_003384"
     CDS             7486..8889
                     /locus_tag="MOX77_003384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HCA3358822.1"
                     /translation="MEFDAFFLARLQFAFTVSFHIIFPAITIGLASYLVVLEGLWLKT
                     RNPVWRSLYQFWLKIFAVNFGMGVVSGLVMAYQFGTNWSGFSQFAGSITGPLLTYEVL
                     TAFFLEAGFLGVMLFGWNKVGPGLHFLSTCMVALGTLMSTFWILASNSWMHTPQGFEI
                     HNGQVVPVDWFAVIFNPSFPYRLLHMSVAAFLSSAMFVGASAAWHLLKGNDTPAIRRM
                     FSMALWMAVVVAPVQALIGDMHGLNTLKHQPVKIAAIEGHWENTPGEPTPLTLVGWPD
                     MEAERTRYALEIPALGSLILTHSLDKQVPALKDYPKEDRPNPTVVFWSFRLMVGMGVL
                     MIFLGLASLWLRYRRRLYHSRPFMHFALWMGPSGLIAILAGWVTTEVGRQPWVVYGLL
                     RTRDAVSAHSTLQMSISLLAFFVVYSLVFGVGYIYMIRLIQKGPQPAETPTAETDGRP
                     ARPISAVGESLEQEKRE"
     gene            8886..9896
                     /gene="cydB"
                     /locus_tag="MOX77_003385"
     CDS             8886..9896
                     /gene="cydB"
                     /locus_tag="MOX77_003385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HCA3358823.1"
                     /translation="MTIDLPVIWFAIIVFATLMYIVMDGFDLGVGILFPFIRDKHDRD
                     VMVNSVAPVWDGNETWLVLGGAGLFGAFPLAYAVITDALTIPLVVMLLGLIFRGVAFE
                     FRFKATESHRAFWDKSFIVGSILATFAQGVVVSAVVSGFQVEGRTFSGSQLDWLTPFN
                     LFCGVGLVVTYALLGATWLIMKSEDPLHSRMCALSRPLLIVLLLVMGGVSVWTPLTHD
                     DIAERWFTLPNLYYFLPVPVLVLAFSVWLWRSVKKPQSHARPFILTLGLIFLGFSGLG
                     ISIWPNIIPPDISLYAAAAPSQSQSFMLVGALIIIPIILAYTFWSYYVFRGKVRHGEG
                     YH"
     gene            9896..10027
                     /locus_tag="MOX77_003386"
     CDS             9896..10027
                     /locus_tag="MOX77_003386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459357.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2474 domain-containing protein"
                     /protein_id="HCA3358824.1"
                     /translation="MVKVKKWSRRVVWMVAIWCASVLLLAGVGMLFRLLMTSAGFRS"
     gene            10233..>11175
                     /locus_tag="MOX77_003387"
     CDS             10233..>11175
                     /locus_tag="MOX77_003387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HCA3358825.1"
                     /translation="MSPISCHSSAAPAMKKIFSVSDFIAFGERYGIDYRFPALPQYTQ
                     SSPVLHGDIEEIALPGGICITRSDVHVLQPYETTSRHSSPLYMLVVLEGNVALAVNEQ
                     TFLLSAGMAFCSQLSEQQTIRAHHGADSKLRTLSLGMYPDGGWRERLPVSLADEWERS
                     AASARVWQVPEFLLSGLRYAQQPGPHAASRQLMLEGIMLQLLGYALNLCQPATQKRGL
                     PVTGEYQRLELIRRLLEQTPEKAYTLNELARRAAMSPSSLRCKFRHAYGCTVFDYLRD
                     CRLARARRYLMEGYSVQQAAWMSGYQHATNFATAFRRR"
BASE COUNT         2541 a         2688 c         3018 g         2928 t
ORIGIN      
        1 gagcggtatt gcgccgtcct cgtcgccacg gactggcaaa gcgtctgtaa gtcctgagat
       61 tacgcttgac cttccaacac tgacaaggcc cagactggca acagttccca cacaaaagga
      121 gttcactatg cagttccata ttgatgacat gacctgcggc ggctgcgcca gtacggtaaa
      181 aaagacgatt ctgactctcg atgctaatgc gacggtgaga accgacccgg cgacgcgtct
      241 ggttgacatt gaaacgtcgc tatccgcgga gcagattgcc gccgccctgc aaaaggccgg
      301 tttcccgccg cgcgagaggt aatcgtcaat ggcgatcggt ctggcgacag gccggtcgcg
      361 atacgctagc cacgcttcgc ttttctttgc gtgagataat ccccataaaa aatgtgacaa
      421 atcatgtgcc agtaagcttt gttaataata tgtaatgatt tgtctatttt tgctaacatt
      481 ttacctgcta tatacaaaaa gataacaaat aagtagcgca acgctacctt gttacgtcgc
      541 tttgacgacg ggagcgctcc agcgtttcgc cgcttcaaag cttgatgtta tttttgatgc
      601 aggacactac ctatgtacac ccccctgaac tggacgacga cacaacgaca tgtggcgttt
      661 gccagcttta ccagttggat gctggatgcg tttgatttct ttatccttgt ctttgtactt
      721 agcgatctcg ccgaatggtt tcacgcttcc gtatcggagg tttccattgc gattatgctg
      781 accctggcgg tacgtcccat tggcgcgctg ctatttggcc gaatggcgga aaagtacgga
      841 cgtcgaccga tactgatgct caatattctg ttctttacgg tgtttgaact gctttccgcc
      901 tggtcgccca ccttcatggc atttctgatt tttcgggtca tgtacggcgt ggcgatgggc
      961 gggatatggg gcgtcgcgtc atcactggcg atggaaacca ttcccgatcg ttcgcgtggc
     1021 ctgatgtcgg gcatttttca ggcaggctat ccctgcggct atctgttcgc ctcggttatt
     1081 tttggcctct tctacagtat ggtaggctgg cgtggcatgt tcctgattgg cgccctgcct
     1141 gttgtcttgc tgccttatat ctggtttaaa gtgccggaat cccccgtctg gctggcggcc
     1201 agagcgcgta aagagaatac cgcgctgctt cctgttctgc gcaaacagtg gaagttgtgt
     1261 ctgtatctgg tgctggtcat ggcgttcttt aactttttca gtcacggcac gcaggatctc
     1321 tatcctacct tcctgaagat gcagcatggt tttgatccgc atctgatcag tatcattgca
     1381 attttttata acattgccgc catgctcggc ggtattttct acggtacgct atcggaacgt
     1441 attgggcgta aaaaagcgat catgatcgcc gcctttcttg cgcttccggt actcccgcta
     1501 tgggcatttt ccagcggatc attcacgatt ggtctgggcg cgttcctgat gcagtttatg
     1561 gtgcagggcg cctggggtgt cgtgccgacc tggctgaacg agctggttcc ggcgaatgcg
     1621 cgcgccgtgc tgccagggtt tgtttaccaa ctcggtaatt tactggcgtc ggttaatgcg
     1681 acgttacagg cccgcatcgc ggaaacgcat ggtggcaatt acgggttggc aatggcgatc
     1741 gtggctggcg cggtggctat tttaatctgt gtatttgtgg catttggtcg cgagacccgg
     1801 ggagtcgtca tctccggtac agatagcgac gccctcccgg agtcggccat cggtcatcgc
     1861 acgtaaacac tacgctcctg gcgcatactg tcgccgggag cgctccttcc tcctgtggtt
     1921 tttacgccct ttcaacgaac aacaaaggtt aatgatggca tctgcctttc gtgaccatta
     1981 caatcatcgc ttactttttt ctttataaga aattgattgt tggaccttaa aattgtcaac
     2041 ggagcgaaga tatcatgttg aaagataacc aaaaacacaa cgagtctgtt gccccgaata
     2101 gcgcctttct gtctgagtta caacgtgcat taccggaatt ttttatcgcc gatcgctata
     2161 acgagcaggg cgaactgatc gcgaaaggcg gatttgatct cgccaaattt gagcgcgcgc
     2221 tgaaagcgcg taatattgat gagctgacta gcggttatca gattgatttt attggcaaag
     2281 attacgcaaa aaaacaggcg ggtgaaaaat ccgttaccgt tatcgttcct gacgtggaac
     2341 acaatactct ggcagaaaat aaaaacagcc ataatctttt tctgaccgga gataatctgg
     2401 atgttttacg ccatctgcaa aataattacg ccgataccgt cgatatgatc tatatcgatc
     2461 ccccttataa caccggatcg gacgggtttg tctatcccga tcattttgaa tatagcgatc
     2521 gggcgttgca ggatatgttt ggtcttaatg ataccgaact ggcacgttta aaatccattc
     2581 agggtaaatc gacgcactcc gcgtggttat ctttcatgta tccgcgtctt ttcctggcca
     2641 ggaagctcct gaaagatacc gggtttattt ttatctctat cgacgataat gagtacgcca
     2701 atcttaaatt aatgatggat gagatttttg gcgaaggcgg atttgtcacc aatgtgatgt
     2761 ggaagcgcaa aaaagagatt tctaacgact ctgataacgt ttccatccag ggggaataca
     2821 ttcttgttta cgccaaaacc ggtcagggcg ctttacgttt agaaccgctt tctaaagagt
     2881 atattcagaa atcctataaa gaaccgaccg aacagtttcc agaagggaaa tggcgaccgg
     2941 tgccgttaac ggtgtcaaaa gggctgagcg gcggcggcta tacctataaa attaccacgc
     3001 cgaacggtac ggtacacgaa agactatggg cttatcctga agccagttac caaaaactgg
     3061 tggccgataa tctggtctat tttggcaaag ataacggcgg tattccccag cgagtcatgt
     3121 acgcgcatca cagtaaaggg cagccaacga ccaattactg ggataacgta gcgtcgaata
     3181 aagaggggaa aaaggagatt ctggatctct tcggcgacaa cgtttttgat acgccgaaac
     3241 cgaccgcatt attgaagaaa atcatcaagc tcgctatcga taaagacggc gtcgttctgg
     3301 acttttttgc cggttccggc accacggccc atgcggtgat ggcgctgaat gaagaagatg
     3361 gggggcagcg cacgtttatt ctgtgtacta tcgatcaggc attaagcaat aacactatcg
     3421 cgaaaaaagc aggttataac actattgatg aaatcagccg cgagcgaatt acacgcgttg
     3481 cggcgaagat ccgcgccaac aatcccgcga ccaatagcga tctcggtttt aaacattatc
     3541 gttttgccac tccgacacag cagacgctgg acgatctgga tagcttcgat attgctaccg
     3601 gccattttat caataccagc ggtcaactgg ccgctttcac cgagtcagga tttaccgaca
     3661 tgatcaatcc tttttccgcc agaggattgg gcgtgccggg cggcgcaagc ggcgaagaga
     3721 ccttattaac gacatggctg gtcgccgatg gttataaaat ggatattgac gtacagaccg
     3781 ttgatttttc cggctattgc gccaggtatg ttgataatac gcgcctgtat ctgattgatg
     3841 aacgatgggg aacagagcag acccgcgatc ttctcaacca cattggtacg caccagcttc
     3901 cggttcagac cattgtcatt tacggctact ctttcgacct tgaatccatt cgtgaactgg
     3961 aaatcggctt aaaacagctt gatcaaaaag tgaacctggt gaagcgttat taagagggga
     4021 tgatgatgaa tattttgctg gaagaacttc cccatcagga acaggcgtta gcggcgattc
     4081 tggcgagttt caccggtatc gatcacgcgc aggccgatca taatcactat gctaatccgc
     4141 tgattaaggg acgttacgac gataaggcca atattgacgt taaaatggag accgggacgg
     4201 gcaaaaccta tgtctatact cggttgatgt atgaactgca tcagaagtat ggcctcttca
     4261 aatttgtgct ggtggtgccg acgccagcca ttaaagaagg cgcgcggaac tttatcacca
     4321 gcgattacgc cagacagcat ttttcacagt tctacgaaaa tacgcggatg gaattttgca
     4381 ccatcaacgc cggtgatttt aaagtaaagt cggggcgtaa aaattttccg gcccagttat
     4441 taagttttac tgatgccagc cgtcgtgata gccatacgat tcaggttttg ctgatcaatg
     4501 cgcaaatgct caattccgcc agtatgacgc gagacgatta cgatcaacgc tactgggcgg
     4561 gctgacgtcg cctgttaaag ggctgcaaat gacgcgaccg gtggtcatta ttgatgaacc
     4621 gcatcgtttt gtgcgagata acaaatttta tcgagcgatt caggccattc agccgcaaat
     4681 gatcgtccgc tttggcgcta ccttcccgga tattgtcgaa ggtaagggta aaaataaatg
     4741 tgtacgtaaa gattactatc gccggcaacc gcagtttgat ctcaacgcgg tggacagttt
     4801 taacgatggt ttggtgaaag gtattgatat ttattacccg aatctccccg aagaacaggc
     4861 caacaatcgt tatatcgttg acagcgtcac ggcaaagaaa ttaatcctcc gacgggggag
     4921 caaaattgcc gaggttggcg tgggcgaaaa tctcgccgat gtcgatgcag gatttgaagg
     4981 cagtatcgaa tatgccggca gtaaaatgtt gtcgaacgat ctggagctgg aggcagggat
     5041 ggcgctggtg ccaggaacct ttggcgcgag ctaccaggaa ctgattattc aggacgctat
     5101 cgataagcat tttgacactg agcaggcaaa tttcttacgc agcaatgagc cagaaaataa
     5161 tgccccgcgt attaagacct taagcttttt ctttattgac agtattaaaa gctatcgtga
     5221 tgacgaaggt tggttgaaac tgaagtttga gtgtttactg aaaaagaaac tgacgcaact
     5281 gattgacgat tatcagcgca agaccctgcc gcgagaagtg gagtatctgt cgtttctgca
     5341 ggccacgctc gccagcctgc actcggataa ccaaaacgtc cacgctggtt actttggcga
     5401 agaccgcgga agcggcgatg aggcgatcca ggctgaggta gatgatattc tgaaaaataa
     5461 agagaagttg ctcagttttt cagaccatca cggcaactgg gaaacgcgcc gctttctgtt
     5521 ttcaaaatgg acgcttcgcg aaggctggga taacccgaat gtttttgtca ttgctaaatt
     5581 acgttcttcc ggtagcgagt cgagcaaaat tcaggaagtg gggcgcggcc tgcggctacc
     5641 ggtagatgaa aacggccatc gcgttcatca ggaagagtgg ccgtcccgac tgtcgtttct
     5701 gattggttat gatgaaaaag cgtttgccag tatgctggtt gatgagatta atcgcgacag
     5761 caaagttcag cttaacgagc agaagctgga tgaggcgatg atcacactca tcgtcaccga
     5821 gcgacaaaaa gtcgatcctg cgtttacgga gcttcgtttg ctggaagatc tggatgataa
     5881 aaaactgatc aaccggagta atgagtttaa acccagcgtc acgcttaacg gggaaaccaa
     5941 aagtggcttt gcgtggctac tggagttcta ccctgagctg acgcaggcgc gggtgcgagc
     6001 ggatcgcatt cgtgacaata agcccgcctc ccgactgcga gtcaggttac gcaaagagaa
     6061 ttgggaacaa cttagcagta tctgggagca gttttcccgc cgttatatgc tgcaattcga
     6121 gcgtagcggc gcttctctgg aacagattgc cgccgaggtg ctgcgcgatc cgtcgctgta
     6181 tatacgccag aagccaagcc aggtgcaaca acggctggta tcgaatgaag ataatggccg
     6241 ttttgaagtg gcgcagcggg aaggcgaatt agccgccagc gaatttatgg cgggcatgaa
     6301 atatggccat tttcttaagc aactggcgtt acgcaccagt ctgccgatta acgtcctgca
     6361 cccggtgtta atggcgatgc tgcgtgatgt tttgcacgga gattcacgct atttaagcga
     6421 gatctcgttg gacaatatga cccgcgcatt acagacgcgg attaatgcgc attttgcgca
     6481 gcgccacgat tatctgcctc tcgattttca ggcttcaacg tcggtatttg attctacggc
     6541 acggcagttc agagaggaga ttagcgctga aattgtgggg aaaaatgtgg atgagaatgc
     6601 gatagacgat ccccgttctc tctatcaaat accgccgttg cgttatgaca gcgtcgatcc
     6661 agaattgccg ctattaaaat acgattatcc gcaacaggtt tctgtgtttg gcaaactgcc
     6721 taagcgggcc attcagatcc ccaaatatac ggggggctct actacgccgg attttgtgta
     6781 ccgtattgag cgtcaggacg ccgacagtgt ttatttactg gttgaaacta aagcagaaaa
     6841 tatgcgcgta ggcgatcagg ttattcttga tgcgcaacgt aaattcttcg atatgctgcg
     6901 tcggcaaaat atcaatgtcg agtttgcgga agcgaccagc gcgccggcgg tattttctac
     6961 catcaatggc ttgattgggg ggaaggcaaa ctaacgggtt tgaatagacc ttaacggtta
     7021 tctttttgat aggccatata aaatggccgc cgcgcagcga gcgttgcggt cattctcctg
     7081 tgctaatccc ccgtcccgta aaccgcgttg acttgaaggt tatcgtttta cgtctattct
     7141 taactttcag ctaagtgtat tttgctgaaa ttgcaaatag tcttgaagac gctgtttttt
     7201 tgttttgccg ttatttttat aacggccagg tagatattgc caagtgaatg taactaaggg
     7261 agacatgtta tgctaaatag atactaccgt ttcgctgtcg aaaaagacga cccctccgaa
     7321 gcgccagagt cgggcgataa gcctgacagc cagccgcaaa aaaaatcgta atttatctgg
     7381 atattccccg acgtttttac gtttggggaa aataaccgtt tcgtttcaac ctggttgcga
     7441 acagtgaata ttttacacga agtgactata taaacgggag ggaacatgga gtttgatgca
     7501 ttctttttag cgagactcca gtttgccttt accgtctctt ttcatattat tttccccgcg
     7561 attacgattg gcttagccag ttacctggtg gtactggaag gtttatggct aaaaacgcgt
     7621 aatcctgtct ggcgctcgct ctatcagttc tggctcaaaa tttttgccgt caacttcggg
     7681 atgggcgtgg tctccggtct ggtcatggct taccagttcg gaacgaactg gagcggtttt
     7741 tcccagttcg ccggcagtat caccgggcct ttattaacct atgaagtgct caccgcattc
     7801 ttcctggaag cgggattctt aggcgtgatg ctttttggct ggaacaaagt cgggccgggc
     7861 ctgcatttct tgtctacctg tatggtggcg ttgggcacgt taatgtcgac gttctggatt
     7921 ctggcgtcta atagctggat gcataccccg cagggatttg aaattcataa cggtcaggta
     7981 gtcccggtgg actggttcgc ggtgattttc aacccgtcgt tcccgtatcg cctgttgcat
     8041 atgtccgttg cggcgttttt aagtagcgcg atgtttgtcg gcgcgtccgc agcctggcat
     8101 ttactgaaag gtaacgatac gccggctatc cgccgtatgt tctcgatggc gctatggatg
     8161 gcggtcgtgg tggcacccgt tcaggcattg attggcgata tgcatggcct taacaccctg
     8221 aagcatcagc cggtcaaaat cgccgcgatt gaggggcact gggaaaatac gcccggcgag
     8281 ccaacgccgc ttacgctggt aggctggccg gatatggagg cggaacggac ccgctatgcg
     8341 cttgagatcc cggcgttggg cagtctgatc ctgacgcata gcctggacaa acaggtgcct
     8401 gcgctaaaag attatcccaa agaggatcgc cccaacccta ccgtggtgtt ctggtctttc
     8461 cgtctgatgg tgggcatggg cgtactgatg atctttctgg ggctggccag cctgtggcta
     8521 cgctaccgac gccgcctgta tcattcgcgg ccctttatgc actttgcgct gtggatgggg
     8581 ccgtccgggc ttatcgccat ccttgccgga tgggtgacga ctgaagtagg acgtcagccg
     8641 tgggtggtct atggcctgct gcgaacgcgt gatgcggttt ccgcgcacag caccttgcaa
     8701 atgagcatca gtttgctggc cttctttgtg gtctattccc tggtgtttgg ggttggctat
     8761 atttatatga ttcgtcttat ccagaaaggg ccgcagccgg cggagacacc gaccgctgaa
     8821 accgatggca gacccgcgcg tcctatctct gccgtgggag aatcgcttga gcaggagaaa
     8881 cgcgaatgac catcgatctt ccggttatct ggtttgctat tatcgtgttc gccacgctga
     8941 tgtatatcgt gatggatggt ttcgatctgg gcgtcggtat cctgtttccg tttattcgtg
     9001 ataaacacga tcgcgatgtt atggtgaact cggtcgcgcc ggtatgggac gggaacgaaa
     9061 cctggctagt gctgggcggg gccgggcttt ttggcgcgtt cccgttggct tatgccgtca
     9121 tcaccgacgc gctgactatc ccgctggtgg ttatgctgct tggtcttatc tttcgcggcg
     9181 tcgcttttga attccgtttt aaagccaccg agtcgcatcg cgcgttctgg gataaatcct
     9241 ttatcgtcgg gtcaatcctg gcgacctttg cccagggggt tgtggtgagc gcggtggtga
     9301 gcggttttca ggtggaaggg cgaaccttta gcggttcgca gcttgactgg ctgacgccgt
     9361 ttaatctgtt ctgcggcgtc ggtctggtcg tcacctacgc gctgctgggc gctacctggc
     9421 tgattatgaa aagcgaagat ccgctgcata gccggatgtg cgcgctgtcg cgcccgttgt
     9481 tgatcgtctt gttgctggtg atggggggcg tcagcgtgtg gacgccgctc acccatgacg
     9541 acatcgccga gcgctggttc acgctgccca atttatacta cttcctgccg gtgcctgtgc
     9601 tggtgttggc ttttagcgtc tggctatggc gcagcgtgaa aaaaccacaa tcccatgcgc
     9661 gtccatttat tctcacgcta gggctgattt ttctggggtt cagcgggtta ggaatcagta
     9721 tttggccgaa tattattcca ccggatattt cgctgtatgc cgccgccgcg ccgtcgcaaa
     9781 gtcaaagctt tatgctggtt ggggcgctga taatcatccc gattattctg gcttatacct
     9841 tctggagcta ctacgtcttc cgtggaaaag tgcgacatgg agagggatat cactgatggt
     9901 taaagtgaaa aaatggtcgc ggcgagtcgt atggatggtc gcgatatggt gcgccagcgt
     9961 gcttctgctg gcgggcgtcg gaatgttgtt cagactgctc atgacctccg caggatttcg
    10021 ctcctgactg atacccccgg acgcgctttc gtctctcgcg aaagcgcgtt tttatcgaca
    10081 gatcggcgtt tatcgatcac ctttgctcgc cttatctctc ccctcaatag cggttgataa
    10141 ttattctcat ctttattgtc gttcccgggc cgcagtgata tggttacaca gtggctaacg
    10201 ctctggtata acgcagataa acggtattga taatgtctcc gatctcctgt cactcttccg
    10261 ccgccccggc gatgaaaaag atcttttccg tcagcgactt catcgcgttt ggcgagcgtt
    10321 atggcattga ttaccgcttc cctgcgttac cgcagtatac gcagagtagt cccgtacttc
    10381 atggcgatat cgaagagata gcgcttcccg gcgggatttg cattacacgc tcggatgttc
    10441 acgtgttaca accttatgaa accacctctc gccatagcag tccgctgtat atgctggtgg
    10501 tgttggaagg taacgtcgcg ctggctgtca atgagcagac ctttttgttg agcgcgggga
    10561 tggcgttttg ctcgcaactg agtgagcagc agacgatacg cgcccatcac ggcgcagaca
    10621 gtaaattgcg caccttatcg ctgggaatgt acccggacgg cgggtggcgg gagcgtttgc
    10681 ctgtctcgct ggcagacgag tgggaacgta gcgcggcctc ggcgagggtc tggcaggtgc
    10741 cggagtttct gctttcgggg ctacgttatg cgcagcagcc cggacctcat gcggcgtcac
    10801 gccagttaat gctggaaggc atcatgctgc aattgctggg ctatgcgtta aatctatgtc
    10861 agcccgcaac gcaaaaacgc ggacttcccg tcaccggtga ataccagcgg ctggagctca
    10921 ttcggcgttt actggagcaa acgccggaaa aagcctacac gctgaacgaa ctggcgcgtc
    10981 gggcggcaat gagtccgagt agcctgcggt gcaagtttcg ccatgcctat gggtgtaccg
    11041 tgtttgatta tctgcgcgat tgccgcctgg cgcgcgcgcg tcgttatctg atggagggat
    11101 acagcgtgca gcaggccgcc tggatgtcag gctatcaaca tgccactaac tttgcgacgg
    11161 catttcgtcg gcgtt
//
LOCUS       DAGWFR010000129        11150 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.131, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000129 DAGWFR010000000
VERSION     DAGWFR010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 11150)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11150)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11150
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.131"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..2287
                     /gene="leuS"
                     /locus_tag="MOX77_003388"
     CDS             <1..2287
                     /gene="leuS"
                     /locus_tag="MOX77_003388"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008456064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HCA3358826.1"
                     /translation="WTYDNIAYMKNQLKTLGFGYDWSREIATCTPEYYRWEQKFFTEL
                     YKKGLVYKKTSAVNWCPNDQTVLANEQVIDGCCWRCDTKVERKEIPQWFIKITAYADE
                     LLRDLDKLDHWPDTVKTMQRNWIGRSEGVEITFDVKGYDNTLTVYTTRPDTFMGATYL
                     AVAAGHPLAQKAAANNAELAAFIDECRNTKVAEAEMATMEKKGVDTGYKAIHPLTGEE
                     IPVWAANFVLMEYGTGAVMAVPGHDQRDYEFASKYGLTIKPVILAADGSEPDLSEQAL
                     TEKGVLFNSGEFDGLAFEAAFNAIADKLAEKGVGERKVNYRLRDWGVSRQRYWGAPIP
                     MVTLEDGTVLPTPEDQLPVILPEDVVMDGITSPIKADPEWAKTTVNGMPALRETDTFD
                     TFMESSWYYARYTCPQYQEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR
                     DAGMVTSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDA
                     AGHELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG
                     ANRFIKRVWKLVYEHTAKGPVAALNVDALSEDQKALRRDVHKTIAKVTDDIGRRQTFN
                     TAIAAIMELMNKLAKAPQEGEQDRALLQEALQAVVRMLNPFTPHVCFTLWQELGGEGD
                     IDNAPWPVADEQAMVENTTLVVVQVNGKVRGKITVAVDATEEQVRERAGQEHLVAKYL
                     DGVTVRKVIYVPGKLLNLVVG"
     gene            2302..2892
                     /gene="lptE"
                     /locus_tag="MOX77_003389"
     CDS             2302..2892
                     /gene="lptE"
                     /locus_tag="MOX77_003389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly lipoprotein LptE"
                     /protein_id="HCA3358827.1"
                     /translation="MRYLVTLLLSLAVLVTAGCGWHLRSTTQVPASMKTMILDSGDPN
                     GPLSRAVRNQLRLNNVNLLDKDTTRKDVPSLRLGTVTISQDTASVFQDGQTAEYQIVM
                     TVNASVLIPGHDIYPISTKVYRSFFDNPQMALAKDNEQAMIVQEMYDKAAEQLIRKLA
                     SVRAADIQATKEEATADNETAAPASTPARVSTTLSN"
     gene            2892..3923
                     /gene="holA"
                     /locus_tag="MOX77_003390"
     CDS             2892..3923
                     /gene="holA"
                     /locus_tag="MOX77_003390"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HCA3358828.1"
                     /translation="MIRLYPEQLRAQLNEGLRAAYLLLGNDPLLLQESQDAIRLAAAS
                     QGFEEHHAFTLDPSTDWGSLFSLCQAMSLFASRQTLVLQLPENGPNAAMNEQLATLSE
                     LLHDDLLLIVRGNKLTKAQENAAWYTALADRSVQVSCQTPEQAQLPRWVAARAKAQNL
                     QLDDAANQLLCYCYEGNLLALAQALERLSLLWPDGKLTLPRVEQAVNDAAHFTPFHWV
                     DALLMGKSKRALHILQQLRLEGSEPVILLRTLQRELLLLVNLKRQSAHTPLRALFDKH
                     RVWQNRRPMIGDALQRLHPAQLRQAVQLLTRTEITLKQDYGQSVWADLEGLSLLLCHK
                     ALADVFIDG"
     gene            3925..4566
                     /gene="nadD"
                     /locus_tag="MOX77_003391"
     CDS             3925..4566
                     /gene="nadD"
                     /locus_tag="MOX77_003391"
                     /EC_number="2.7.7.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide adenylyltransferase"
                     /protein_id="HCA3358829.1"
                     /translation="MKSLQALFGGTFDPVHYGHLKPVETLANLIGLSRVIIMPNNVPP
                     HRPQPEASSAQRKYMLELAIADKPLFTLGERELQRNAPSYTAQTLKAWREEQGPEAPL
                     AFIIGQDSLLNFPTWHDYDTILDNTHLIVCRRPGYPLEMTQAQHQQWLEQHLTHTPDD
                     LHQLPAGKIYLAETPWLNISATLIRERLEKGESCDDLLPENVLNYINQQGLYR"
     gene            complement(4541..5635)
                     /locus_tag="MOX77_003392"
     CDS             complement(4541..5635)
                     /locus_tag="MOX77_003392"
                     /EC_number="4.1.1.81"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine-phosphate decarboxylase"
                     /protein_id="HCA3358830.1"
                     /translation="MALFNSAHGGNIREAATVLGISPDQLLDFSANINPLGMPVSVKR
                     ALIDNLDCIERYPDADYFHLHQALARHHQVPASWILAGNGETESIFTVASGLKPRRAI
                     IVTPGFAEYGRALAQIGCEIRRWSLREADGWQLTDAILEALTPDLDCLFLCTPNNPTG
                     LLPERQLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFY
                     AIPGLRLGYLVNSDDAAVARMRRQQMPWSVNALAALAGEVALQDSAWQQATWHWLREE
                     GARFYQALCQLPLLTVYPGRANYLLLRCEREDIDLQRRLLTQRILIRSCANYPGLDSR
                     YYRVAIRSAAQNERLLAALRNVLTGITPAD"
     gene            5732..6340
                     /locus_tag="MOX77_003393"
     CDS             5732..6340
                     /locus_tag="MOX77_003393"
                     /EC_number="3.1.3.73"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylcobalamin/alpha-ribazole phosphatase"
                     /protein_id="HCA3358831.1"
                     /translation="MRLWLVRHGETEANVAGLYSGHAPTPLTEKGIGQAKTLHTLLRH
                     APFDRVLCSELERARHTARLVLEGRDTPQHILPELNEMYFGDWEMRHHRDLTHEDAES
                     YAAWCTDWQNAVPTNGEGFQAFTRRVERFISRLGAFSDCQNLLIVSHQGVLSLLIARL
                     LAMPAASLWHFRVEQGCWSTIDICEGFATLKVLNSRAVWRPE"
     gene            6669..6986
                     /gene="rsfS"
                     /locus_tag="MOX77_003394"
                     /gene_synonym="rsfA"
     CDS             6669..6986
                     /gene="rsfS"
                     /locus_tag="MOX77_003394"
                     /gene_synonym="rsfA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007373852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HCA3358832.1"
                     /translation="MQGKALQDFVIDKIDDLKGQDIIALDVQGKSSITDCMIICTGTS
                     SRHVMSIADHVVQSSRAAGMLPLGVEGENAADWIVVDLGDVIVHVMQEESRRLYELEK
                     LWS"
     gene            6990..7457
                     /gene="rlmH"
                     /locus_tag="MOX77_003395"
     CDS             6990..7457
                     /gene="rlmH"
                     /locus_tag="MOX77_003395"
                     /EC_number="2.1.1.177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016245807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HCA3358833.1"
                     /translation="MKLQLVAVGTKMPDWVQTGFTEYLRRFPKDMPFELIEIPAGKRG
                     KNADIKRILDKEGEQMLAAAGKNRIVTLDIPGKPWDTPQLANELERWKQDGRDVSLLI
                     GGPEGLSPACKAAAEQSWSLSALTLPHPLVRVLVAESLYRAWSITTNHPYHRE"
     gene            7488..9389
                     /gene="mrdA"
                     /locus_tag="MOX77_003396"
     CDS             7488..9389
                     /gene="mrdA"
                     /locus_tag="MOX77_003396"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-transpeptidase MrdA"
                     /protein_id="HCA3358834.1"
                     /translation="MKRQNSFRDYTAESALFVRRALVAFLGILLLTGVLIANLYNLQI
                     LRFTDYQTRSNENRIKLVPIAPSRGIIYDRNGIPLALNRTIYQIEMMPEKVDNVQQTL
                     DALRSVVDLNDDDIAAFKKERARSHRFTSIPVKTNLTEVQVARFAVNQYRFPGVEVKG
                     YKRRYYPYGSALTHVIGYVSKINDKDVERLDRENKLANYAATHDIGKLGIERYYEDIL
                     HGQTGYEEVEVNNRGRVIRQLKEVPPQAGHDIYLTLDLKLQQYIETLLAGSRAAVIVT
                     DPRTGGVLSLVSMPSYDPNLFVDGISSKDYSGLLNDPNTPLVNRATQGVYPPASTVKP
                     YVAVSALSAGVITRNTSLFDPGWWQLPGSEKRYRDWKKWGHGHLNITKSLEESADTFF
                     YQVAYDMGIDRLSEWMGKFSYGHYTGIDLAEERSGNMPTREWKQKRFKKPWYQGDTIP
                     VGIGQGYWTATPIQMSKALMILINDGVVKVPHLLMSTAENGKQVPWVQPHEPPVGDIH
                     SGYWEIAKDGMYGVANRPNGTAHKYFASAPYKIAAKSGTAQVFGLKANETYNAHKIAE
                     RLRDHKLMTAFAPYNNPQVAVAIILENGGAGPAVGTIMRQILDHIMLGDNNTHLPAEN
                     PVVAAAEDQ"
     gene            9392..10504
                     /gene="mrdB"
                     /locus_tag="MOX77_003397"
                     /gene_synonym="rodA"
     CDS             9392..10504
                     /gene="mrdB"
                     /locus_tag="MOX77_003397"
                     /gene_synonym="rodA"
                     /EC_number="2.4.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004885876.1"
                     /note="rod shape-determining protein RodA; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan glycosyltransferase MrdB"
                     /protein_id="HCA3358835.1"
                     /translation="MTDNPNKKTFWDKIHIDPTMLLILLALLVYSALVIWSASGQDIG
                     MMERKIGQIAMGLVVMVVMAQIPPRVYEGWAPYLYIICIILLVAVDAFGAISKGAQRW
                     LDLGIVRFQPSEIAKIAVPLMVARFINRDVCPPSLKNTAIALVLIFMPTLLVAAQPDL
                     GTSILVALSGLFVLFLSGLSWRLIGVAIVLIAAFIPILWFFLMHDYQRQRVMMLLDPE
                     TDPLGAGYHIIQSKIAIGSGGLRGKGWLHGTQSQLEFLPERHTDFIFAVLAEELGLVG
                     ILILLALYILLIMRGLWIAARAQTTFGRVMAGGLMLILFVYVFVNIGMVSGILPVVGV
                     PLPLVSYGGSALIVLMAGFGIVMSIHTHRKMLSKSV"
     gene            10515..>11150
                     /gene="rlpA"
                     /locus_tag="MOX77_003398"
     CDS             10515..>11150
                     /gene="rlpA"
                     /locus_tag="MOX77_003398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic peptidoglycan transglycosylase RlpA"
                     /protein_id="HCA3358836.1"
                     /translation="MHKQLPVICVAAGIVLLAACTNDGGQQQTTVAPQPAVCNGPTVE
                     ISGAEPRYEPLNPTANQDYQRDGKSYKIVQDPSRFSQAGLAAIYDAEPGSNLTASGEM
                     FDPMQLTAAHPTLPIPSYARITNLANGRMIVVRINDRGLYGTDRVISLSRAAADRLNT
                     SNNTKVRIDPIIVAPDGSLSGPGMACTTVAKQTYALPPRPDLSGGMGSASSA"
BASE COUNT         2569 a         3068 c         3092 g         2421 t
ORIGIN      
        1 gtggacgtac gacaacatcg cgtacatgaa aaaccagctc aaaacgctgg gttttggcta
       61 tgactggagc cgtgaaatcg cgacctgcac cccggaatac taccgttggg aacagaaatt
      121 cttcaccgag ctgtataaaa aaggcctggt gtacaagaag acttctgccg ttaactggtg
      181 cccgaacgat cagaccgttc tcgccaacga acaggtgatc gacggctgct gctggcgttg
      241 cgacaccaaa gttgagcgta aagagatccc acagtggttt atcaaaatca ccgcttacgc
      301 agacgagctg ttgcgcgatc tggataagct ggaccactgg cctgataccg taaaaacgat
      361 gcagcgcaac tggattggcc gctctgaagg cgtggaaatc accttcgatg tgaagggtta
      421 cgataacacg ctgaccgtct ataccacccg tccggatacc tttatgggcg ccacctacct
      481 ggcagtggcc gccggtcatc cgctggcgca aaaagcggcg gcgaacaacg ccgagctggc
      541 ggcgttcatc gacgaatgcc gtaacaccaa agtggccgaa gccgaaatgg cgaccatgga
      601 gaaaaaaggc gtcgacaccg gctataaagc gattcatccg ttaactggcg aagagatccc
      661 ggtctgggcg gcaaactttg tcctgatgga gtacggcact ggcgcggtga tggccgttcc
      721 gggtcacgat cagcgcgact acgaatttgc ctccaaatac ggtttgacca tcaagccggt
      781 gattctggcc gctgacggtt ccgagccgga tctttccgaa caggcgctga ccgaaaaagg
      841 cgtgctgttt aactccggtg agttcgacgg tctggccttt gaagcggcgt ttaacgccat
      901 tgccgataaa ctggcggaaa aaggcgtcgg cgaacgtaaa gtgaactacc gtctgcgtga
      961 ctggggcgtt tcccgtcagc gttactgggg cgcgccgatc ccgatggtca ccctggaaga
     1021 cggcaccgtg ctgccgacgc cggaagatca actgccggtt attttgccgg aagacgtcgt
     1081 catggacggc atcaccagcc cgatcaaggc cgatcctgag tgggcgaaaa ccaccgttaa
     1141 cggtatgccg gcgctgcgtg aaaccgacac cttcgacacc tttatggaat cgtcatggta
     1201 ctacgcgcgt tacacctgcc cgcagtatca ggaaggaatg ctggattcga aagcggcaaa
     1261 ctactggctg ccagtcgaca tctacatcgg cggtattgaa catgccatca tgcacctgct
     1321 ctacttccgc ttcttccata agctgatgcg cgatgcgggc atggtcacct ctgacgagcc
     1381 ggctaaacag ttgctgtgcc agggcatggt actggcggat gcgttctatt atgtcggcga
     1441 gaacggcgag cgtaactggg tttcgccagt tgacgctatc gtcgagcgcg atgaaaaagg
     1501 ccgcatcgtc aaagcaaaag acgcagcggg tcatgagctg gtctacactg gcatgagtaa
     1561 aatgtccaag tcgaaaaata acggtatcga cccgcaggta atggttgaac gttatggcgc
     1621 ggatacggta cgcctgttta tgatgttcgc ttctccggcg gatatgactc tggaatggca
     1681 ggagtccggc gtagaaggcg caaaccgctt tattaaacgc gtctggaagc tggtttacga
     1741 acacaccgct aaaggtcctg tcgcggcgct gaacgtcgat gcgctgagcg aagatcaaaa
     1801 agcgctgcgt cgcgatgtgc ataaaaccat tgccaaagtg accgatgata tcggccgccg
     1861 tcagacgttc aacaccgcca ttgcggcgat catggagttg atgaacaaac tggcgaaagc
     1921 cccgcaggaa ggcgaacaag accgcgcact gcttcaggaa gcgctgcagg ccgtcgtgcg
     1981 tatgcttaac ccgttcaccc cgcacgtctg ctttaccttg tggcaggaac tgggtggcga
     2041 aggcgatatc gacaacgcgc cgtggccggt tgccgacgag caggcaatgg tggaaaacac
     2101 cacgctggtt gtcgtgcagg ttaacggtaa agttcgcggt aagatcaccg ttgcggtgga
     2161 tgccaccgaa gaacaggtgc gtgaacgtgc aggccaggaa catctggtgg caaaatatct
     2221 tgatggcgtt accgtgcgta aagtgattta cgttccgggt aaactcctca atctggttgt
     2281 tggctaagcg cgggaggaag cgtgcgatat ctggtaacac tgttgttatc tctggcggtg
     2341 ctggtcaccg ccggatgcgg ctggcatctg cgtagcacta cgcaggttcc ggcttcaatg
     2401 aaaacgatga tcctcgattc cggcgatccg aacggtccgc taagtcgtgc ggtacgtaat
     2461 cagttacggc tgaataacgt aaacctgctt gataaagaca caacgcgcaa agacgttccg
     2521 tctctgcggc ttggaacggt gactatttcg caggatacgg cgtcagtgtt ccaggacggc
     2581 cagacggcgg aatatcagat agtgatgacc gtcaatgcct cggtattgat tccgggccat
     2641 gacatctatc ctatcagcac gaaagtgtac cgttcgttct tcgataaccc gcagatggcg
     2701 ttggcgaagg ataacgagca ggccatgatc gttcaggaga tgtacgacaa agccgctgaa
     2761 cagctgattc gtaagctggc cagcgtccgc gcggcggata ttcaggcgac gaaagaggag
     2821 gctaccgccg acaatgagac ggcggcgccc gcctctacgc cagcacgcgt ctccactacg
     2881 ctgagtaact aatgatcagg ttgtatcctg aacaactccg cgcgcagctc aacgaagggc
     2941 tgcgtgcggc atatctatta ttgggcaacg atccgctgct gctgcaggaa agtcaggacg
     3001 ctattcgtct ggcggctgcg tcgcaaggct tcgaagagca ccacgctttt actctcgatc
     3061 ccagtaccga ctggggatcg cttttctcac tctgccaggc gatgagcctg ttcgccagcc
     3121 gccaaacgct ggtgctgcaa ctgccggaaa acgggcctaa cgcggcaatg aatgagcaac
     3181 tcgccaccct gagcgagcta ctgcatgacg acctgttatt aatagtacgc ggaaacaagc
     3241 tcaccaaagc gcaggaaaac gccgcctggt ataccgcgct ggcagatcgt agcgttcagg
     3301 tcagttgtca gacgccggag caggcgcagc ttccccgctg ggtggccgcc agagcgaaag
     3361 cacagaattt gcaactggat gacgccgcga accaactgct gtgctattgc tatgagggca
     3421 atctgttggc gctggcgcag gcgctggaac ggctgtcgct gctttggcct gacggtaagt
     3481 taacgcttcc tcgcgtggag caggccgtca atgacgccgc ccactttacc cctttccact
     3541 gggtggatgc gttactgatg gggaaaagca aacgcgcgct gcatatcctg caacagctac
     3601 gccttgaagg cagcgaaccg gttattctgc tgcggaccct ccagcgagag ctgctgctac
     3661 tggtaaatct caaacgtcag tccgcgcata cgccgttacg cgcgctgttt gataaacacc
     3721 gggtctggca aaaccgtcgc cccatgatcg gcgacgcgtt gcagcgtctc catcctgcac
     3781 agcttcgcca ggccgtgcag ttactgacgc gtacagaaat tacgctcaaa caggattatg
     3841 gtcagtcggt atgggcagat cttgaagggc tgtcgctcct gctctgccat aaggcgctgg
     3901 cagacgtatt tattgatggg tgatatgaaa tcgttacagg ctttattcgg cggcaccttt
     3961 gatccggtgc attatggaca tcttaaacct gttgaaacgt tggcgaatct gatcggctta
     4021 tcgcgggtga ttattatgcc taacaatgtg ccgccgcatc gcccccagcc ggaagcctcc
     4081 agcgcgcagc gtaaatatat gctggagctg gctatcgccg ataagccgct ttttacgctg
     4141 ggtgaacgcg agctacagcg aaacgcgccc tcttacactg cgcaaacgtt gaaagcatgg
     4201 cgcgaagaac agggccccga agcgccgctg gcgtttatta tcggccagga ctcgctgctt
     4261 aacttcccca cctggcatga ttacgacacc atccttgata acactcacct gatcgtttgt
     4321 cgtcgtcccg gctaccccct tgaaatgacg caggcgcaac accagcagtg gctggaacag
     4381 catctgaccc atacgccaga cgatctgcac cagttgccag ccggtaaaat ttacctggcg
     4441 gaaacgccat ggcttaatat ctccgcaacc ctcatccgcg aacggctgga aaaaggcgaa
     4501 tcctgcgacg atctgttgcc ggaaaacgtg ctgaactaca tcaatcagca ggggttatac
     4561 cggtaagcac attgcgtagc gccgccagca gacgctcgtt ttgcgcagcg ctgcgtatcg
     4621 ccacacgata atagcggctg tccagccccg ggtagttagc gcagctacgg attaaaatcc
     4681 gctgcgtcag caaccgtcgc tgcagatcaa tatcctctcg ctcacagcgt aacaacagat
     4741 agtttgcccg cccgggataa accgtcagca ggggaagctg acaaagcgcc tgataaaacc
     4801 gggcgccctc ctcccgtaac caatgccagg tcgcctgttg ccaggcacta tcctgtaacg
     4861 ctacctcacc ggccagcgcc gccagcgcgt taaccgacca cggcatttgt tggcgacgca
     4921 tccgcgccac cgccgcgtca tcgctattga cgagatatcc caaccgcagg ccgggaatgg
     4981 cataaaattt ggtcagcgaa cgcagcaccc agatatgcgg attatcttta agagcaggaa
     5041 taaagcccgt ctcatgcgga ataaaatcga taaacgcttc atccaggatc aggttaatgt
     5101 tcagcgattt gcagcgatcg gcaatggcct gtaataactg ccgctccggc agcaggccgg
     5161 taggattatt gggcgtacac agaaacaggc agtccagatc gggcgtcaac gcctcaagaa
     5221 tggcatcggt aagctgccag ccatccgctt cgcgtagaga ccagcgacga atttcacagc
     5281 caatttgcgc cagcgcccgg ccatactccg cgaaacctgg cgtgacaatt attgcacgac
     5341 gcggtttaag accgctcgcc acggtaaaga ttgactccgt ctcgccattt cccgccagta
     5401 tccacgatgc cggcacctgg tgatgacgcg ccagcgcctg gtgcaaatga aaataatcgg
     5461 cgtccgggta gcgctcaatg cagtccagat tgtcgataag cgcgcgtttc acgctgacag
     5521 gcatacccag cggattaatg tttgcgctaa aatccagtaa ctggtcaggc gagatgccca
     5581 acaccgtcgc ggcttcccga atattaccgc catgcgcgct gttgaataac gccattatgc
     5641 ctccggccaa aaaacgctat tttagtgaaa aaaacgttgc gcaatcaggg gcattatcat
     5701 gttttgcgca tttaacctca tgaggaatac catgcgattg tggctggtgc gtcatggcga
     5761 aaccgaggcc aatgtcgccg ggttgtatag cggacatgct cccacgccgt taacggaaaa
     5821 agggattggc caggcgaaaa cgctacatac tttattgcgc cacgcgccat ttgacagggt
     5881 gttatgcagc gagctggagc gcgcgcgcca taccgcccgg ctcgtactgg agggccggga
     5941 tacgccgcaa cacatcttac ctgagcttaa tgagatgtac ttcggcgact gggaaatgcg
     6001 ccatcaccgc gacctcaccc atgaagatgc cgaaagctat gccgcctggt gtacggactg
     6061 gcagaatgcg gttccgacca atggcgaggg ttttcaggct tttacccggc gcgtagagcg
     6121 ctttatctcg cgactcggcg cgttcagcga ttgccagaac ctgctgatcg tcagccatca
     6181 gggcgtactc agcctgttga ttgcccgcct gctcgcaatg cccgccgcct cgctatggca
     6241 tttccgggta gaacagggat gctggagcac aatcgacata tgcgaagggt tcgccaccct
     6301 gaaagtatta aatagtcgtg ccgtctggcg gcctgagtga tgaattttcc gttttttctc
     6361 gccgcagcgg tttcgcccat tgacagcccc cgacaggctg ttattctccg cagccaggct
     6421 tttttcacct tgcagagctt tgcagaaatt gttttacaaa aatggcgatg ctttctgtga
     6481 cgtgggatgg gatgataatc tggttttaaa cgccgatccg gcgacataag tcccggtatc
     6541 gccgctgatt caggtatact acacggcgtc ccgccggaag gttagcgtta actcgcaacg
     6601 ccttaccggt ccagcctgtt ggcctttttt ctatcgttat aacgcaatta ttcacccagg
     6661 gggaaaactt gcagggtaaa gcactccagg attttgttat cgataaaatt gatgacctga
     6721 aaggtcagga catcatcgcc ttagatgttc agggtaaatc cagtatcacc gactgtatga
     6781 ttatttgtac cggcacctcc agccgtcacg ttatgtctat tgccgaccac gtggtgcagt
     6841 cgtcgcgcgc ggccggtatg ctgccgttgg gcgtcgaagg cgaaaatgcg gctgactgga
     6901 ttgtcgtcga tctgggcgat gtgattgtgc atgtcatgca ggaagaaagt cgccgcctgt
     6961 atgaactgga aaaactctgg agttaatgcg tgaagctgca acttgtcgct gtcggcacga
     7021 agatgcccga ctgggttcaa acgggattta cggaatatct gcgtcgtttt ccgaaagata
     7081 tgccctttga gctgatcgaa atccctgcgg gcaaacgcgg caagaacgcg gatatcaaac
     7141 gcattctcga caaagagggc gagcagatgc tggccgccgc cggtaagaat cgcattgtta
     7201 ccctggatat tccaggcaag ccgtgggata cgccgcagtt agccaatgag ctggagcgct
     7261 ggaaacagga cgggcgcgac gtcagtttgc tgattggcgg cccggaagga ttatctcccg
     7321 cctgcaaagc ggcagcggaa cagagctggt cgctctcggc gttaacgctc cctcacccgc
     7381 tggttcgggt tctggtcgcg gagagtttgt accgggcgtg gagcatcaca accaaccacc
     7441 cttatcaccg tgagtgatcg tgaagtcttg agaagattaa gcagcggatg aaacgacaaa
     7501 attcttttcg tgactatacg gctgagtccg cactgtttgt gcgtcgggcg ctggtcgcct
     7561 ttttgggtat tttgctgctg accggcgtac tgatcgccaa tttgtataat ctgcaaattc
     7621 tccgttttac cgattaccag acccgctcga acgaaaaccg tatcaagctg gtgccaattg
     7681 cgccaagccg cgggataatc tacgaccgca acggcattcc ccttgcgctg aaccgcacta
     7741 tctatcagat tgaaatgatg ccggaaaagg tggataacgt tcagcaaacg ctggatgcac
     7801 tacgcagtgt ggtcgattta aacgacgacg atatcgccgc ctttaaaaaa gagcgcgccc
     7861 gatcccatcg ctttacttct attccggtga aaacaaacct gacggaagtt caggtcgcgc
     7921 gctttgctgt caaccagtac cgttttccgg gcgtcgaagt caaaggctat aaacgccgct
     7981 attatccata cggatcggcg ctgacccacg ttatcggcta cgtatcgaaa atcaatgata
     8041 aagacgtcga gcgtctcgac agagaaaaca aactggcgaa ctacgccgcc acccatgaca
     8101 tcggcaagct gggcattgag cgctactatg aagatattct gcatgggcaa accggttatg
     8161 aagaggttga agtcaacaac cgcggccgcg ttattcgcca gcttaaagag gtgccgccgc
     8221 aggccggaca cgatatctac ctgacgctgg atctcaagct ccagcagtat attgaaacgc
     8281 tgctggcagg cagtcgcgcg gcggtgattg tcaccgatcc gcgtaccggc ggcgtgctat
     8341 cgctggtctc catgccaagt tacgacccta accttttcgt ggacggcatc tccagcaaag
     8401 attactccgg gctgcttaac gacccgaaca cgccattagt gaaccgcgcg actcagggtg
     8461 tctacccacc cgcttctacc gttaagcctt acgtcgccgt atcggcgtta agcgctggcg
     8521 tcatcacccg taacaccagt cttttcgacc ctggctggtg gcagttgccg gggtctgaga
     8581 aacgctaccg cgactggaaa aaatggggcc acgggcatct gaatatcacc aaatcccttg
     8641 aagagtcggc agataccttc ttctatcagg tggcctatga catggggatc gatcgcctgt
     8701 cagaatggat gggtaagttc agctatggtc actataccgg aattgatctc gcagaagagc
     8761 gctctggtaa tatgccgacc cgcgagtgga aacagaaacg ctttaaaaaa ccgtggtatc
     8821 agggcgatac gattccggtg ggcatcggcc agggctactg gacggcaacg ccgattcaga
     8881 tgagtaaggc gctgatgatc cttattaacg acggtgtagt taaagtcccg catctgttaa
     8941 tgagcaccgc ggaaaacggt aaacaggtgc cgtgggtaca gccgcatgag ccaccggtgg
     9001 gcgatattca ctccggctac tgggaaattg cgaaagatgg catgtatggc gtcgccaacc
     9061 gccctaacgg cacggcgcat aaatattttg ccagcgcgcc ctataaaatc gcggcgaagt
     9121 cgggcaccgc gcaggtcttt ggcctgaagg ccaacgaaac gtacaatgcg cataaaatcg
     9181 ccgagcgcct gcgcgaccat aaattaatga ccgcctttgc gccgtataac aatccccagg
     9241 tcgccgtcgc gatcatcctt gaaaacggcg gcgcaggccc ggcagtaggc acgatcatgc
     9301 gccaaatcct tgatcacatc atgctgggcg acaacaacac ccatttgcct gcggaaaacc
     9361 cggtggttgc agcggcggag gaccaataat catgacggat aatccgaaca aaaaaacctt
     9421 ctgggataaa attcatatcg atcccacgat gctactcatt ctgctggcgt tactggttta
     9481 tagcgcgttg gtcatctgga gcgccagcgg ccaggacatc ggcatgatgg agcgtaaaat
     9541 cggtcagatt gcgatggggc tggtggttat ggtggtgatg gcgcagatcc cgccgcgcgt
     9601 gtatgaaggc tgggcgccct atctctatat catttgtatc attctgctgg tcgccgttga
     9661 tgccttcggc gcaatatcca agggcgcgca gcgctggctc gatctgggaa tcgttcgctt
     9721 tcagccttcg gaaatagcca aaatcgccgt gccgctgatg gtcgcccgct ttattaaccg
     9781 cgacgtctgc ccgccctcgc tgaaaaatac cgccatcgcc ctggtattaa tctttatgcc
     9841 taccctgctg gtcgccgccc agccggacct ggggacgtct attctggtcg ccctttccgg
     9901 tctctttgtc ctatttttgt ctggcctgag ctggcgctta attggggtcg ccattgtatt
     9961 gatcgctgca tttattccta ttttgtggtt tttcctgatg cacgattacc aacgccagcg
    10021 cgtcatgatg ctccttgatc cggagaccga tccgctgggc gcgggctatc atattattca
    10081 gtctaaaatc gccattggct caggcggcct gcgcggtaaa ggctggctcc acggcaccca
    10141 gtcgcagctg gagtttttac ccgaacgcca taccgacttt attttcgcgg tactggcgga
    10201 agagctcggt ctggtgggca tcctgattct gctcgcgctc tatattttgc taataatgcg
    10261 cggtctgtgg attgccgcca gagcgcaaac tacatttggt cgcgtgatgg ctggcggatt
    10321 aatgttaata ttattcgttt atgtcttcgt aaatattggt atggtgagcg gtattctgcc
    10381 tgtggttgga gtacctttac ccttggtcag ctacgggggc tccgcactga ttgtgctgat
    10441 ggccgggttc gggattgtga tgtcgatcca cacccacaga aaaatgttgt cgaaaagcgt
    10501 ataaggggtg cgcaatgcat aagcagttgc ctgtaatctg cgtcgcggca gggatagtac
    10561 tactcgcggc atgtactaat gacggcggtc agcagcaaac caccgtcgcg ccgcaacctg
    10621 cggtatgtaa tggtccgact gtggaaatca gcggagcgga accgcgttat gaacctctga
    10681 atccgaccgc aaaccaggat tatcagcgtg acggtaaaag ttataaaatc gttcaggacc
    10741 cgtcccgctt tagccaggct ggcctggccg ctatttatga tgcggaaccc ggcagtaatt
    10801 taaccgcctc cggggagatg ttcgatccga tgcagcttac cgccgcccat ccgacactgc
    10861 ctatccccag ctatgcgcga atcaccaacc tggccaacgg tcgcatgatc gtcgtgcgta
    10921 ttaacgatcg cggcctctat ggcaccgatc gggtcatctc cctgtcccgc gcagcggcgg
    10981 atcgtctgaa tacctcgaat aatactaaag tacggattga ccccattatc gtggcgccgg
    11041 atggttcgct ctccggcccg gggatggcct gtacgacggt ggcgaaacag acctacgctc
    11101 tgcccccgcg ccctgattta agcggcggca tgggaagcgc ctcttcagcg
//
LOCUS       DAGWFR010000130        11127 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.132, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000130 DAGWFR010000000
VERSION     DAGWFR010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 11127)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11127)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11127
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.132"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..1428)
                     /locus_tag="MOX77_003399"
     CDS             complement(<1..1428)
                     /locus_tag="MOX77_003399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001756569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HCA3358837.1"
                     /translation="MNAALTERLVYVARAARDAGHGKRGAIYDAACAELGMSRATLLR
                     RLKEVSVTDKRKKRADAGRSALTRDEAALISATLREATRKNGKRLYSIADAVETLRAN
                     GFISAGRTDETTGEFFPLSEDAISRALRNYGLHPEQLDAPAPYTEVASLHPNHVWQID
                     ASLCTLYYLSNGHKGLQVMDSAKFYKNKPANLARIASDRVWSYEITDHASGWIYVEYV
                     TGAESGENLCSVLINAMQERGGADVLHGVPKILYLDPGSANTAGMTKNMCRSLGIDLI
                     AHKPHNARATGQVEKARDIIERKLEPGLKFRPVHSLEELNALAAKWRSHFNATAVHSR
                     HGKTRTDIWLKITAEQLKKAPSVEVCRELAVAAPELRKVTPKLRVSFRGTEFDVSTVP
                     GVLVGEKLMITRNPWRSDVAQVVLTGEDGHETFFLVEEVRKNEFGFAEGAAVFGESYK
                     ALPETPAQMAAKETEALVTGTDNAAD"
     gene            complement(1432..1596)
                     /locus_tag="MOX77_003400"
     CDS             complement(1432..1596)
                     /locus_tag="MOX77_003400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001330525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358838.1"
                     /translation="MIDTPRDFMAGLVCQLESTARSLRSTFDLPDEPTGNAAPSWLTE
                     PTPQINGLEA"
     gene            complement(1606..1989)
                     /locus_tag="MOX77_003401"
     CDS             complement(1606..1989)
                     /locus_tag="MOX77_003401"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358839.1"
                     /translation="MPTLAHLGKAKLFELMTEDDEELAELADGGTVAGLTLDDVDRMS
                     VRELRQALREARETNAAQQRVLADKNEKIDSLSTRLEKKSRIQPPEPDEEVKKLRAEV
                     TALAVEAESAIAVRLSSAFETLCAY"
     gene            2033..2629
                     /locus_tag="MOX77_003402"
     CDS             2033..2629
                     /locus_tag="MOX77_003402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000003711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoid-associated protein"
                     /protein_id="HCA3358840.1"
                     /translation="MILTDVRYASPNSLSNGDASERLSPEEGLVTEASQRLINDICAK
                     YAGRTQFLGCNDVLIAKRESEKLRDVLKAFAAEKGLDGAEKDAFLKSAFEHLHALSKA
                     GEPLSLETLVNAIWPQAPEELSGKLAAEELELSDGFVPDGRVIRALVSFKGKSKYWEL
                     KFDREGKTEGYIDYDPETNIITLRNVPEEFREMWMTEV"
     gene            2873..3223
                     /locus_tag="MOX77_003403"
     CDS             2873..3223
                     /locus_tag="MOX77_003403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015365653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative holin"
                     /protein_id="HCA3358841.1"
                     /translation="MKNLKKFIPPVKKPRLSGWLLTSVLLLGIIALVSPQQLPVVIYK
                     LALITLAAVLGYWLDRSLFPKARPGQYLKHDDRLMAEGRFPVQTGLHLVFSAALIRRA
                     LIVAAVCLAVATGL"
     gene            3226..3954
                     /locus_tag="MOX77_003404"
     CDS             3226..3954
                     /locus_tag="MOX77_003404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001104436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HCA3358842.1"
                     /translation="MNWPQITLIILFAFGLGVTAIRHGEPRNDKYSFWWQLAGNLVIV
                     WLLWCGGFFSQARAAQPPQAALQYRDDVIRNARLEWGLSAPVADFAAQLHQESGWRPD
                     VVSPAGAQGLAQFMPATADWISQLIPMLSNREPFNPAWAIRALVSYDRWLWQRVSAAN
                     DCERMAMTLSGYNGGLGWVQRDRRLASQKGLDSTRWFGHVATVNAGRNAASWRENRHY
                     PQRILRELAPRYLTWGGCSCVASG"
     gene            3938..4588
                     /locus_tag="MOX77_003405"
     CDS             3938..4588
                     /locus_tag="MOX77_003405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000264665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HCA3358843.1"
                     /translation="MWHLVKKLPWRGILLAILINAFLVGLYAMGYRSGHDSAKRDGDT
                     ALSQLQSAFDAYKTEQATLENAALRAWARRYQEQVAAGQRAEAGYLEQIAQLESRNKQ
                     LQGQINDVTQRWIDEKGKSHPIECVFTRGFVRQYNAALGYDNASVDTGHSDSVAAAGT
                     RSGTATGQPETTDTRLRDSGVSQRDVLANIIDNAGQCRRWRNQINALLDEREGLQK"
     gene            4585..4911
                     /locus_tag="MOX77_003406"
     CDS             4585..4911
                     /locus_tag="MOX77_003406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000175095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358844.1"
                     /translation="MTLQVEFWTVVSFLLTFMGFVGGLAKWLFSKTEERQAARFASLE
                     QALQQSASNWGELEKEFMRFKADLPLNYVRREDYIRGQTVIEAKLDALYNKLEVVQQY
                     RNTGGQ"
     gene            4911..5222
                     /locus_tag="MOX77_003407"
     CDS             4911..5222
                     /locus_tag="MOX77_003407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000227551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358845.1"
                     /translation="MVDITRVRRESLRWSLLVALNKTRPYTASETLLLDVSRAIYPDT
                     TPLELRRELDYLADRKMVDLEKKPSGDWFADLTRLGVDLVEYTVECGPGIARPEKYWS
                     E"
     gene            5222..5767
                     /locus_tag="MOX77_003408"
     CDS             5222..5767
                     /locus_tag="MOX77_003408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001696566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3486 family protein"
                     /protein_id="HCA3358846.1"
                     /translation="MARRSTIEKLPEDVRRWLERALTESGFSGYNELESLLRERGYVI
                     SKSAIHRYGQKIERRYGAIRAATEAARMLTEGAADDQDARSEAVIALIQTELFESIVQ
                     LQEAEEGEVDPKERVALLSKVAKNVATLSRASVNLKKFQSEVRARAQQAASNAEKIAR
                     KGGLSSDAVQALRREILGIAT"
     gene            5818..7359
                     /locus_tag="MOX77_003409"
     CDS             5818..7359
                     /locus_tag="MOX77_003409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000080258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358847.1"
                     /translation="MSPMDGRNNLAPVLPDTSALDAPPVLLPYQQRWVADTSPLKVIE
                     KSRRTGITWAEASDNVLTAASSAPAGGMNVYYIAYNQDMTVEYIQACAMWARAFNYAA
                     SEIEEGFWEEDDDDKHIKTYTIKFPDSGFRIVALSSRPSNLRGRQGIIVIDEAAFHEQ
                     LDELLKAALAMLIWGGKVRVISTHDGDDNPFNTLIGDIRAGRQGGSVHRITFREAVSE
                     GLFRRVCLRTGKEWSEASEQAWMASVYKFYAAGASEELDCIPANGGGAWLSRALIESR
                     MSADTPVLRLTCQEGYELLSDEVRFHETQDWLDEHLKPLLEALPADARSFLGRDFGRS
                     GDLSVDYPLLQEKNLVRRVPFVLELRNVPFRQQEQITWYLMDGLPGLLGAAFDARGNG
                     AYLAEYAMQRYGSSRVQQVMPTEGWYREHMPPVKAALEDGNLVDLPKDEDTLDDLRAV
                     QVVNGVPRVPEQRSKAKADGGKRHGDSAIALALAYFASREINKGPVKASSRCRRQAAR
                     MLEGF"
     gene            7359..8855
                     /locus_tag="MOX77_003410"
     CDS             7359..8855
                     /locus_tag="MOX77_003410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016240624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF935 domain-containing protein"
                     /protein_id="HCA3358848.1"
                     /translation="MARGIWVSPDEFVAFSEPQKSLTAQIASRSRAIDFYGLGMYLPN
                     PDPILKAQGRDIRIYRELRTDPLVGGCIRRRKAALKSLERGLERGHASARVFRFIRDM
                     LDDLDLSRIIGEMSDAVLYGYQPCEIMWGRSVRAWAVTDIVGKPPEWFQFDTDNCLRF
                     RARDAGVEGELLSPSKFVVPAQDASYDNPYGFPDLSMCFWPVAFKKGGMKFWLRFAEK
                     FGSPWVIGKHPRGANDAEIEKLLDSMEQMVEDAVAAIPDDSSIELKAADGKADSSEVF
                     RELITLSRSEISIALLGQNQTTEANSNKASAQAGLEVTADIRDADADIIQAAVNQVIR
                     TVVTLNFGDVPCPVWAMWEQETIDDTRATRDEKLTRAGLRLTPQYFKREYQLQDGDID
                     ETPPSERQNNMLPLSFAEAIDADIQAQQQLDDALDILMNGGVLNGTLEPVLAPLFKRV
                     ENGVNPTELLGELAELYPQMNTDDLQERLARILFVANIWGRLHERDNG"
     gene            8836..9657
                     /locus_tag="MOX77_003411"
     CDS             8836..9657
                     /locus_tag="MOX77_003411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016191689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="minor capsid protein"
                     /protein_id="HCA3358849.1"
                     /translation="MSVTTAELAYCMTLPPKRAVSYLKSKGYQITWDWEEMWQEAHAR
                     AFTVAKVTRLDILEDIRGALQQAVDEGKTDRWFRQELEPVLKRKGWWGPRDTTDPVTG
                     KPVTIQQGSPWRLDTIFRTNMSVLYSAGRWAEQMENVDDRPYWMYTGINDSHTRRSHL
                     ALHGLVLRWDDPFWQAFYPPNGWRCRCSVIALSATDVRARGLKVISSGSAMGQELKLV
                     SEKTGEMRNVATFNTGTTKVTTDVGWSYAPGAAYRPDLARYQGTLQPLAQQELRG"
     gene            9660..10118
                     /locus_tag="MOX77_003412"
     CDS             9660..10118
                     /locus_tag="MOX77_003412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000135514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HCA3358850.1"
                     /translation="MASDNLVSITINDKSLRRSLRALDLAATDMEPAMRKIAGTLLAE
                     TQFNFLDEGRPGWMPSLAAEERDGQTLQDTGRLMGSVSTDHDDRQAVVGTNVVYGAIH
                     QFGGKTGRNESVELPARPFLPVTGDGELQPEVVIPILDTIVRHLESAARR"
     gene            10333..>11127
                     /locus_tag="MOX77_003413"
     CDS             10333..>11127
                     /locus_tag="MOX77_003413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001273074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
                     /protein_id="HCA3358851.1"
                     /translation="MSAIHIFKAGTHTDMHGKKLPFTPDDLAACVKAYDPSVHEAPLV
                     IGHPRTEDPAWGWVKALSLSGVDLMAEPAQLDPQFAEMVTDGRFKKVSASFYLPDSPS
                     NPKPGVLYLRHVGFLGAQPPSVKGLKQVSFSEQEEGVVEFADWQAITNASLWGKLRDF
                     LIARFSLDEAEKVLPEWQLNSLREEAYRDTLSQDAAGAQFSETGPGPSSASNEESSMT
                     KEEIEALQEENRRLKQQAADRDARDAQVRQEQLHKDNVAFAEKLVAE"
BASE COUNT         2406 a         3021 c         3254 g         2446 t
ORIGIN      
        1 atctgcggcg ttgtctgtac cggtgaccag cgcttcggtt tcttttgccg ccatctgcgc
       61 cggggtttcc ggcagggctt tgtaactttc gccaaatacc gccgcgcctt cagcaaagcc
      121 aaactcgttc tttctgacct cttcgaccag gaagaacgtc tcgtggccgt cctcaccggt
      181 cagaaccacc tgtgccacat cgctgcgcca cgggttacgg gtaatcatca gtttttcacc
      241 gaccagtacg cccggtaccg ttgatacgtc aaattcagtg ccccggaacg agacacgaag
      301 ttttggcgtg actttgcgga gttctggtgc cgccacagcc agttcacgac atacctcaac
      361 ggaaggcgct tttttcagct gctcagcagt aatcttcagc cagatatccg tgcgggtttt
      421 accgtggcgg ctgtgaacag ccgtggcgtt aaagtggctg cgccatttcg cggccagcgc
      481 gttgagttct tccagactgt gaaccggccg gaacttcaga cccggctcca gcttgcgttc
      541 gataatgtca cgcgcctttt ccacctgtcc ggtggcgcgg gcgttatgcg gcttgtgcgc
      601 tatcaggtca atgcccagtg agcgacacat gtttttcgtc atacccgcgg tgtttgccga
      661 gccggggtcg agatagagta ttttcggcac accgtgcaac acgtctgcgc cgccacgctc
      721 ctgcatggcg ttgataagca cagaacacag gttctcaccg gattccgccc ccgtcacata
      781 ctcaacgtaa atccagccgc tggcatggtc ggtaatctcg taactccaca cgcggtcact
      841 ggcgatacgg gcaaggttag cgggcttgtt cttgtagaac ttcgcgctgt ccatcacctg
      901 cagcccttta tgtccattgc tcaggtagta aagcgtgcag agcgaggcat caatctgcca
      961 gacatgattg ggatgcagac tggccacttc agtatatggt gcaggggcat ccagttgttc
     1021 cgggtgcagg ccatagttac gcagggcacg gctgatggca tcttcggaca acgggaaaaa
     1081 ctcaccggtg gtttcatctg ttctgcctgc ggagataaag ccgttagccc gcagggtttc
     1141 cactgcatcc gcgatggaat agagacgctt accgttcttg cgggtggcct cacgcagtgt
     1201 ggcagatatc agcgcggctt cgtcgcgggt cagggcgctg cgcccggcat cggcgcgttt
     1261 tttgcgttta tcagtcacag agacctcctt cagcctgcgc agcagagtgg cgcgggacat
     1321 gccaagttca gcacaggcag cgtcgtatat tgcaccgcgt ttaccatgcc ccgcgtcacg
     1381 tgccgcgcgg gcgacataaa ccagtcgttc agtcagggca gcattcattg gttatgcctc
     1441 cagcccgtta atctgtggcg tcggctcagt cagccatgaa ggcgctgcat tgcctgttgg
     1501 ctcgtccggc aggtcaaatg tggagcgcag gctacgcgct gtgctttcca gttgacagac
     1561 caggcctgcc atgaagtctc tgggggtatc aatcatgttt tcagctcaat atgcgcacag
     1621 tgtctcaaaa gcgctggaca gtcgaacggc gatagcagat tccgcctcaa ccgctaatgc
     1681 tgtcacttcc gcccgcagct tcttaacctc ctcatcaggc tcaggcggct gaatacggga
     1741 tttcttttcc agtctggtag agagagaatc aattttttca tttttatcgg cgagtacgcg
     1801 ctgttgtgct gcgttggttt cgcgcgcttc gcgcagggcc tggcgaagtt cgcgtactga
     1861 catgcgatca acgtcgtcaa gcgtcaggcc ggcaactgtg ccgccgtcgg ccagttcggc
     1921 aagctcttcg tcgtcttctg tcattaattc gaaaagtttg gcttttccca aatgtgccaa
     1981 cgttggcaca tttggtttca gcgccgggga taagtatttt gtcgatgctt gcatcattct
     2041 cacagatgtc cggtatgcca gccccaactc actttcaaat ggagacgctt ctgagagatt
     2101 gagtcctgaa gaaggtctag ttactgaagc ctctcagcgc cttataaacg atatttgtgc
     2161 aaaatatgca ggacgcacac agttcctagg ctgtaatgat gtcttaatcg ccaaacgaga
     2221 gtctgaaaag ttacgtgacg ttttaaaagc atttgcggca gagaaaggac ttgacggcgc
     2281 tgaaaaagat gcatttctta agagtgcgtt tgaacactta catgcactaa gtaaggctgg
     2341 tgaaccactt agtcttgaaa cccttgttaa tgccatttgg ccccaggctc ccgaggagtt
     2401 atctggtaaa cttgctgctg aagagttgga gttatcggat ggcttcgttc ctgatggtcg
     2461 agtcattcgg gctctggtat cttttaaagg caagtctaaa tattgggaac ttaagtttga
     2521 ccgggaaggg aaaactgaag gctatattga ttatgatccg gaaacaaata ttatcaccct
     2581 acgtaatgta cctgaagaat ttagggaaat gtggatgact gaggtttaat cgtggcgatt
     2641 tcatttgaga tgctgacagc tctgtatcgt cgtatggaat tccaagaggg gtttcgtgtc
     2701 ggctcacagc gcattcctgt ggggcgatgg ccagcccggt gttcgggtac cgggctggtc
     2761 gttctttcaa agccatcatg cagtgcacgt ttacatcttc actattaacg ctgtttaaaa
     2821 tccgtatccc gccacatttg tgatgctgtc tccaccaaac gaggagacac acatgaaaaa
     2881 cctgaaaaaa ttcattcccc ctgttaaaaa acctcgcctc agcggctggc tgctgacctc
     2941 agtgctgttg ctgggcatca tcgctctggt ctcgccacag cagttgcctg ttgtgatcta
     3001 caagctggca ctcatcacgc tggcagcagt gctgggttac tggcttgacc gttcgctctt
     3061 ccccaaagcc cgtcccggtc agtacctgaa acatgacgac agactgatgg ctgaagggcg
     3121 tttccctgtg cagaccggcc ttcaccttgt attttctgct gcgttaatcc gccgtgcact
     3181 gattgttgca gcggtctgtc tggctgtggc aacaggactg tgaccatgaa ctggcctcaa
     3241 atcaccctca ttattctgtt cgcctttggt ctgggcgtaa ccgccatcag acacggagaa
     3301 ccacgtaacg ataaatacag cttctggtgg cagcttgctg gcaacctggt gattgtctgg
     3361 ctgctctggt gtggcggctt cttcagtcag gcccgcgcag cgcagcctcc gcaggctgcg
     3421 ctgcagtatc gcgatgatgt gatccgtaat gcccggcttg aatggggact gtctgcgccg
     3481 gtggccgatt tcgccgcgca actgcatcag gaaagcggct ggcgacctga tgtggtctcg
     3541 ccggctggcg ctcagggact ggcgcagttc atgcctgcca ctgccgactg gataagccag
     3601 ttgataccga tgctgagcaa tcgtgagccg tttaatcctg catgggctat ccgggcgctg
     3661 gtcagctatg accgctggct gtggcagcgc gtcagcgccg ccaacgactg cgagcgtatg
     3721 gccatgacat tgtcgggcta taacggtggt ctgggctggg tacaacggga caggcggctt
     3781 gcatcacaga aaggtctgga cagcacccgc tggttcggac atgtcgccac ggtgaatgcc
     3841 ggacgcaatg cggccagctg gcgggagaac cgccattatc cgcagcgcat cctgcgcgaa
     3901 ctggcaccgc gatatctcac atggggaggc tgcagttgtg tggcatctgg ttaaaaagct
     3961 gccgtggcgc ggcattctgc tggccattct tatcaatgcc tttctggtcg gcctgtatgc
     4021 catgggatac agaagtggtc atgactctgc aaagcgtgac ggtgataccg cgctcagtca
     4081 gttgcagtca gcatttgacg cgtacaaaac ggagcaggca acgcttgaga atgctgcgct
     4141 gcgggcctgg gccagacggt atcaggagca ggtggccgcc gggcagcggg ctgaagccgg
     4201 ttatcttgag cagattgctc aactggagag ccggaataaa caactacagg ggcaaattaa
     4261 cgatgtcaca cagcgctgga ttgatgaaaa aggtaagagc catcccattg agtgcgtgtt
     4321 tactcgcggt ttcgtgcgcc agtacaacgc cgcactcgga tatgacaatg catccgtcga
     4381 caccggtcat tcagactcag ttgccgccgc tggcacccgc tctggcacag cgaccgggca
     4441 acctgaaacc actgacaccc ggttacgcga ttcgggtgtc tcccagcgtg acgttctcgc
     4501 caacatcatc gacaacgcag gacaatgtcg tcgctggcgg aaccagataa acgcgttact
     4561 ggatgaacgg gaaggattac agaaatgaca ctgcaggttg aattctggac ggtagtgagt
     4621 tttctgctca ccttcatggg gtttgtggga gggctcgcca aatggttgtt cagtaaaaca
     4681 gaagaacgcc aggcggcacg attcgcctcc cttgaacagg ccctgcaaca atccgcctcc
     4741 aactggggcg agctggaaaa agaatttatg cgatttaaag cggatttacc gctgaattat
     4801 gtccgtcgag aggattatat ccgtggccag acagtcattg aggccaaact ggacgcgctt
     4861 tataacaaac tggaagtggt acagcagtac cgcaataccg gaggtcaata atggtcgata
     4921 ttacccgggt acgccgcgaa tccctgcgct ggagtctgct ggttgccctg aacaagaccc
     4981 gcccttacac cgccagcgag acgctgctgc tggatgtgtc ccgtgccatc tacccggaca
     5041 ccacaccgct ggaactgcgc cgcgaactgg attatctggc tgaccgtaaa atggttgatc
     5101 tggagaaaaa accttctggc gactggtttg ctgacctgac ccgcctcggc gtagacctgg
     5161 tggaatacac cgtggaatgt ggtccgggta ttgcccgccc ggaaaagtac tggagtgaat
     5221 aatggccaga cgcagcacaa tagaaaagct gccggaagac gtgcgccgct ggcttgaacg
     5281 ggcgctgact gaatccggct tcagcgggta taacgagctg gagtccctgc tgcgtgagcg
     5341 ggggtacgtt atcagcaaat ccgctatcca tcgctatgga cagaagattg agcgccgcta
     5401 tggtgctatc cgtgcggcaa cagaagcggc ccgcatgctg accgaaggcg cagcagacga
     5461 tcaggatgcg cgttcggagg ctgtgatagc ccttattcag accgagctgt tcgagagtat
     5521 tgtccagttg caggaggcgg aagaaggcga agtcgatcct aaagaacgcg tggccctgct
     5581 gtcgaaggtg gcgaagaatg tggctacgct gtcccgcgcg tccgtcaacc tcaaaaagtt
     5641 ccagtctgaa gtacgggcca gagcgcagca ggcagccagc aacgccgaga aaattgcccg
     5701 taagggggga ctgtcaagcg acgcagtaca ggcgcttcgt cgcgagattc tggggattgc
     5761 cacatgacaa aatcatccgg agtgatttta aacgccgctg gcggcggccc cgaagggatg
     5821 agtcccatgg acgggaggaa taaccttgct cccgttttgc ctgatacctc ggcgctggat
     5881 gcccctcccg ttctgttgcc ttaccagcag cgctgggtgg cagacacctc tccgcttaag
     5941 gtgatagaaa agagccgtcg taccggtatt acatgggctg aggcatccga taacgtactg
     6001 accgccgcct cttctgcgcc agcaggcggg atgaatgtgt attacatcgc ttataaccag
     6061 gacatgaccg tcgaatacat tcaggcgtgt gcaatgtggg cacgggcatt caactatgcg
     6121 gccagtgaaa ttgaagaagg attctgggaa gaggacgacg acgacaaaca catcaagact
     6181 tacaccatca aatttcctga ctccggcttt cgtattgttg cgctctccag ccgcccgtct
     6241 aacctgcgtg gccgtcaggg tattattgtt atcgacgaag cggcgttcca tgagcaactg
     6301 gacgaactgc tgaaagcggc gctggcgatg cttatctggg ggggaaaggt acgcgttatc
     6361 tccacccatg acggtgacga caatccgttc aatacgctta tcggggatat ccgtgccgga
     6421 cgtcagggag gcagcgtaca tcgcatcact ttccgggaag ccgtatctga ggggctgttc
     6481 cggcgcgttt gtctgcgcac cgggaaggaa tggtcagagg catccgagca ggcctggatg
     6541 gcgtcggtgt acaaattcta cgctgccggc gcatccgaag agcttgactg tattccggcc
     6601 aacggtggcg gcgcctggct gtcccgtgcc ctgatagagt cccgcatgtc cgctgatacg
     6661 ccggtattgc gtctgacctg tcaggaaggt tatgaactgc tgtctgatga ggttcgcttc
     6721 cacgagacac aggactggct tgatgagcat ctgaaaccct tgctggaggc actccccgct
     6781 gatgcccgct ctttcctggg gcgcgacttt ggccgtagcg gtgatttgtc ggtggactat
     6841 cccctgctgc aggagaagaa cctggtacga cgcgtgccat tcgtactgga gctgcgtaac
     6901 gtgccgttca gacagcagga gcaaatcacc tggtatctga tggatggcct gcccggtctg
     6961 ctgggtgcag cgtttgatgc ccgtggtaat ggtgcctatc tggctgaata cgccatgcag
     7021 cgctacggct ccagccgggt tcagcaggtg atgccaactg aaggctggta ccgggagcat
     7081 atgcctccgg tcaaagctgc actggaagac ggtaacctgg tggacttacc aaaggatgaa
     7141 gacacactgg atgacctgcg ggccgttcag gtggtgaacg gtgtcccccg cgtgccggag
     7201 caacgctcaa aagcaaaggc tgacggtggt aaacgccacg gggattcagc catcgcactg
     7261 gcgctggcgt atttcgccag ccgtgaaatt aacaaagggc cggtgaaggc aagctcacgc
     7321 tgtcgtcgtc aggcggcccg tatgctggag ggattctgat ggcgaggggt atctgggttt
     7381 cacccgatga atttgttgct ttttctgagc ctcagaaatc actgaccgcg cagattgcct
     7441 cccgcagccg cgcgatcgac ttttacggac tgggcatgta tctgcccaat cctgatccca
     7501 ttctcaaggc tcagggacgg gatatccgta tctaccgcga actgcgcacc gacccgctgg
     7561 ttgggggctg tatccgcaga cgtaaagcag cgctcaaatc actggagcgt ggactggagc
     7621 gcggtcacgc ttctgcccgg gtcttccgtt tcatccgcga catgctcgac gatctggatc
     7681 tgtcccgcat catcggtgag atgagtgatg ccgtgctcta cgggtatcag ccctgtgaaa
     7741 tcatgtgggg ccgttcggtc agggcgtggg cagtgacgga tattgtcggc aaaccgcctg
     7801 agtggtttca gtttgatacg gacaactgcc tgcgcttccg ggcgcgtgat gcgggtgtgg
     7861 agggtgagct gctgtcaccg tcaaaattcg tggtgccggc acaggatgcc tcgtatgaca
     7921 atccttacgg tttcccggac ctgtccatgt gcttctggcc ggtcgccttc aagaaaggcg
     7981 ggatgaaatt ctggctccgc tttgccgaaa agtttggctc cccgtgggtg atcggtaagc
     8041 acccgagggg tgcaaatgat gcagagattg aaaaactgct ggactccatg gagcagatgg
     8101 tggaggacgc ggtggccgcc atccccgatg acagcagcat cgaactcaaa gccgcggatg
     8161 gtaaggcgga cagcagcgag gtattccgcg agctgatcac actgtcacgc agtgagatct
     8221 ccattgcatt acttggtcag aatcagacca cggaagcgaa cagtaacaag gcctcagcac
     8281 aggccgggct ggaggtaacg gctgatatcc gcgatgcgga tgcggacatc attcaggcag
     8341 cagtgaatca ggttatcaga acggtggtca ccctgaactt cggcgatgtg ccgtgtccgg
     8401 tctgggccat gtgggaacag gagaccattg atgacacccg cgccacccgc gacgaaaaac
     8461 tcacccgggc gggtctgcgt ctgaccccgc aatactttaa gcgtgagtac cagctgcagg
     8521 acggcgatat tgacgagaca ccaccgtcgg aacgccagaa taacatgctg ccgctgtcat
     8581 ttgccgaggc gattgatgcc gatattcagg ctcagcagca gcttgacgac gcgctggaca
     8641 ttctgatgaa cggaggtgtg ttaaatggca cgctggaacc cgtcctggca cctctgttta
     8701 agcgggtcga aaacggggtt aacccgactg agctgctggg cgaactggcg gagctctacc
     8761 ctcagatgaa cacggacgat ctgcaggaac ggctggcccg cattctcttt gtggcaaata
     8821 tctggggacg cctgcatgag cgtgacaacg gctgaactgg cgtactgcat gacgcttccc
     8881 ccgaagcggg cagtcagtta cctgaagtcc aaagggtatc agattacctg ggactgggaa
     8941 gaaatgtggc aggaggccca tgcccgcgcc tttaccgttg ctaaagtgac ccgcctggat
     9001 atcctggaag atattcgcgg ggcactgcag caggctgtcg atgaaggaaa aaccgatcgc
     9061 tggttccggc aggagctgga gccggtgctg aagcgtaagg gatggtgggg accacgtgac
     9121 acgactgacc cggtaacggg taagccggtc accattcagc agggcagtcc gtggcggctc
     9181 gataccatct ttcgcaccaa tatgtccgta ctctacagcg ccggtcgttg ggcggaacag
     9241 atggaaaacg tcgacgacag gccgtactgg atgtataccg gcatcaacga cagccatacc
     9301 cgcaggagcc atctggcgct gcatggtctg gtgctgcgct gggatgaccc gttctggcag
     9361 gcattttacc cgccgaacgg ctggcgctgc cgctgtagtg tgattgccct gagtgcgacg
     9421 gatgtacgtg cccgtggcct gaaggttatc agctccggct ctgccatggg ccaggaactg
     9481 aaactggtct cagagaaaac cggcgaaatg cggaacgtgg ccacctttaa taccggcacc
     9541 acgaaggtga ccaccgacgt cggctggtct tatgcaccgg gggcagcata ccgtcccgac
     9601 ctggcccgct atcagggtac gcttcagcca ctggcacaac aggaactgag aggataacaa
     9661 tggcttccga taacctggtc agtatcacca ttaacgataa atccctgcgc cggagcctcc
     9721 gtgcgctgga tctggctgcc acagacatgg agcccgcgat gcgcaaaatc gccggaaccc
     9781 tgctggcgga aacacagttt aactttcttg atgaggggcg tccggggtgg atgccctcgc
     9841 tggcagcgga agaacgtgac gggcagacac tgcaggatac cgggcgtctg atggggtcag
     9901 tatcaaccga ccatgacgac cggcaggctg ttgtggggac caacgttgtt tacggtgcca
     9961 ttcaccagtt cgggggtaaa acggggcgta atgagtctgt tgaacttccg gcccgcccgt
    10021 tcctgccggt gacgggggat ggagaactac agcctgaagt ggtaatcccc atcctcgata
    10081 ccattgtccg ccatcttgaa tcagcggccc gtcgctgagt tttctctctt caggtgggtg
    10141 atttatcatt gccagcgaat gaggggctgt attaccttta taaaggcttt acagcctctg
    10201 ttttataacc gcctccggtt caccgcattg ctttccctgt ccttctcccc tgatgttttc
    10261 taaagcagat taaaatcgcc gggcctgcat ttctcacaaa ctgtctccga caacataacg
    10321 cgggacagca aaatgtcagc cattcacatt tttaaagccg gtactcatac cgatatgcac
    10381 ggcaaaaaac tgccgttcac gccagacgat cttgccgcct gcgtgaaagc ctatgacccg
    10441 tccgtccatg aagcaccact cgtgattggt catcccagaa cggaagaccc ggcgtggggc
    10501 tgggtgaaag ccctgtcgct cagcggcgtc gatctgatgg cagagcctgc ccagctggac
    10561 ccgcagtttg ctgagatggt caccgacgga cgattcaaaa aagtgtccgc ctctttctac
    10621 ctcccggatt caccgtccaa tccgaagccc ggcgtgctct accttcgcca tgtgggcttt
    10681 ctcggggcac agccaccttc cgtcaaaggg ctgaaacagg tgtccttcag tgagcaggaa
    10741 gaaggtgtgg tggagttcgc cgactggcag gccatcacga atgcctccct gtggggaaag
    10801 ctgcgcgatt ttctgatcgc ccgcttcagt ctggacgagg cagaaaaagt cctgccggaa
    10861 tggcagctca acagtctgcg cgaagaggcg taccgcgaca cactgtcgca ggatgcagca
    10921 ggtgcacaat tcagtgagac aggcccgggg ccgtcttccg caagtaacga ggaatcatcg
    10981 atgacaaaag aagagattga agcccttcag gaggagaacc gccgcctgaa gcagcaggct
    11041 gctgatcgcg atgcgcgtga tgcacaggtc agacaggagc aactgcataa ggacaatgtg
    11101 gcctttgcag aaaaactggt cgcagag
//
LOCUS       DAGWFR010000131        11095 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.133, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000131 DAGWFR010000000
VERSION     DAGWFR010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 11095)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11095)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11095
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.133"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..437)
                     /locus_tag="MOX77_003414"
     CDS             complement(<1..437)
                     /locus_tag="MOX77_003414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoaspartyl peptidase/L-asparaginase"
                     /protein_id="HCA3358852.1"
                     /translation="MNKAVIAIHGGAGAIARAQMSHEQELRYIQALSEIVESGQKMLE
                     AGDSALDVVTEAVRLLEACPLFNAGIGAVYTRDGTHELDACVMDGNTLKAGAVAGVSH
                     VRHPVLAARLVMERSPHVLMVGEGAENFAFSQGMARVSPDIFST"
     gene            641..1876
                     /gene="moeA"
                     /locus_tag="MOX77_003415"
     CDS             641..1876
                     /gene="moeA"
                     /locus_tag="MOX77_003415"
                     /EC_number="2.10.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HCA3358853.1"
                     /translation="MEFSAGLMPLETALTQMLSRITPLTAVETLPLMNCFGRILATDI
                     VSPLDVPGFDNSAMDGYAVRVADLSADKPLPVAGKAFAGQPYQGEWPAGTCIRIMTGA
                     PVPAGCEAVVMQEQTEQTDDGVRFTTDVRCGQNIRRRGEDIRQDAVVFPAGTRLTTAE
                     LPVLASLGIADAQVVRKVRVALFSTGDELQLPGQLLEAGQIYDTNRLTIHLMLQQLGC
                     EVINLGIIPDDPGKLRAAFVDADSQADVVISSGGVSVGEADYTKTILEELGEIAFWKL
                     AIKPGKPFAFGKLSNSWFCGLPGNPVSAALTFYQLVQPLLAKLGGNTASAVPPRQRVR
                     TTSRLKKTPGRLDFQRGILQRSANGELEVTTTGHQGSHIFSSFNLGNCFIVLERERGN
                     VEPGEWVEVEPFNALFGGL"
     gene            1876..2625
                     /gene="moeB"
                     /locus_tag="MOX77_003416"
     CDS             1876..2625
                     /gene="moeB"
                     /locus_tag="MOX77_003416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-synthase adenylyltransferase MoeB"
                     /protein_id="HCA3358854.1"
                     /translation="MAELSDQEMLRYNRQIILRGFDFEGQEALKDARVLVVGLGGLGC
                     AATQYLAGAGVGQLTLLDFDTVSVSNLQRQTLHSDATVGQPKVESARDALARINPHIT
                     ITPVNARLDDDAMTSLIAGHSLVLDCTDNVSVRNQLNAGCYIAKVPLISGAAIRMEGQ
                     VTVFTYRENEPCYRCLSRLFGENALTCVEAGVMAPLIGVIGSLQAMEAIKLLAHYGQP
                     ASGKIVMYDAMTCQFREMKLMRNPGCEVCGQ"
     gene            2903..3802
                     /locus_tag="MOX77_003417"
     CDS             2903..3802
                     /locus_tag="MOX77_003417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycyl-radical enzyme activating protein"
                     /protein_id="HCA3358855.1"
                     /translation="MIFNIQRYSTHDGPGIRTVVFLKGCSLGCRWCQNPESRARAQDL
                     LYDARLCLEGCDLCAQAAPDVIERALNGLLIHREKLTDAHFSILAHCCPTQALTVCGE
                     IKSVDEIMATVLRDKPFYDRSGGGLTLSGGEPFMQPELAAELFKASHDAGIHTAVETC
                     LHVPWKYIAPSLPYIDLFLADLKHVADGPFKQWTDGSASRVLENLRKLAAAGKKMVIR
                     VPLIQGFNADEETIKAITDFAADELHVGEIHFLPYHTLGINKYHLLSQPYHAPDKPLD
                     APALLDFAQKYACQKGLTATLRG"
     gene            3808..6240
                     /locus_tag="MOX77_003418"
     CDS             3808..6240
                     /locus_tag="MOX77_003418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycyl radical protein"
                     /protein_id="HCA3358856.1"
                     /translation="MTQLKLDTLSDRIKAHKTALVHIVKPPVCTERAQHYTEMYQQHL
                     DKPIPVRRALALAHHLAERTIWIKHDELIVGNQASEVRAAPIFPEYTVSWIEKEIDDL
                     ADRPGAGFSVSEENKRILHDVCPWWRGQTVQDRCYGMFTDEQKGLLATGIIKAEGNMT
                     SGDAHLAVNFPLLLEKGLDDLRDKVAERRSRINLTVLEDLHGEQFLKAIDIVLDAVSQ
                     HITRFAALARQMAGEESRESRRKELLTIAENCEVIAHQPPQTFWQALQLCYFIQLILQ
                     IESNGHSVSFGRMDQYLYPYYRRDVELNQTLDREHAIELLHSCWLKLLEVNKIRSGSH
                     SKASAGSPLYQNVTIGGQNLINGQPMDAVNPLSYAILESCGRLRSTQPNLSVRYHAGM
                     SNDFLDACVQVIRCGFGMPAFNNDEIVIPEFIKLGIEPQDAYDYAAIGCIETAVGGKW
                     GYRCTGMSFINFARVMLAALEGGRDATSGKVFLPQEKALSAGNFNNFDEVMAAWDTQI
                     RYYTRKSIEIEYVVDTMLEENVHDILCSALVDDCIERAKSIKQGGAKYDWVSGLQVGI
                     ANLGNSLAAVKKLVFEQGVIGQQQLAAALADDFDGLPHEQLRQRLINGAPKYGNDDDS
                     VDTLLARAYQTYIDELKQYHNPRYGRGPVGGNYYAGTSSISANVPFGAATMATPDGRK
                     AHTPLAEGASPASGTDHLGPTAVIGSVGKLPTGSILGGVLLNQKLNPTTLENESDKQK
                     LMVLLRTFFEVHKGWHIQYNIVSRETLLDAKKHPDQYRDLVVRVAGYSAFFTALSPDA
                     QDDIIARTEHML"
     gene            complement(6318..7127)
                     /locus_tag="MOX77_003419"
     CDS             complement(6318..7127)
                     /locus_tag="MOX77_003419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HCA3358857.1"
                     /translation="MTVNVVVTDMDGTFLDDAKQYDRVRFMAQYQELKKRNIEFVVAS
                     GNQYYQLISFFPELKDEISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLKDKQL
                     NFVACGLKSAYVSKNAPETFVALMAKHYHRLQPVNDYHDIDDILFKFSLNLPDEQIPL
                     VIDKLHVSLDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWNRSPQNVVAIGDSGN
                     DAEMLKMAHYSFAMGNAADNIKALSRYHTDDNNHQGALNVIQAVLDGTDPF"
     gene            7389..8654
                     /locus_tag="MOX77_003420"
     CDS             7389..8654
                     /locus_tag="MOX77_003420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1479 domain-containing protein"
                     /protein_id="HCA3358858.1"
                     /translation="MTTPFTYETLPADPKAAIRQMKQALRAQIGDVQAVFDRLSATIA
                     ARVAEINDLKAQGQPVWPIIPFSELATGNISDATRAEVKRRGCAVIKGHFPREQALAW
                     DQSMLDYLDKNHFDEVYKGPGDNFFGTLSASRPEIYPVYWSQAQMQARQSEEMALAQS
                     FLNRLWQVERDGKRWFNPDISIIYPDRIRRRPPGTTSKGLGAHTDSGALERWLLPAYQ
                     QVFASVFNGNVEQYDPWNAAHRTEVEEYTVDNTTKCSVFRTFQGWTALSDMLPGQGLL
                     HVVPIPEAMAYILLRPLLDDVPEDELCGVAPGRVLPISEQWHPLLMAALTSIPPLEAG
                     DSVWWHCDVIHSVAPVENQQGWGNVMYIPAAPMCEKNLAYARKVKAALETGASPDDFP
                     REDYETTWEGRFTLRDLNIHGKRALGMDV"
     gene            complement(8776..10371)
                     /locus_tag="MOX77_003421"
     CDS             complement(8776..10371)
                     /locus_tag="MOX77_003421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000961428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATPase"
                     /protein_id="HCA3358859.1"
                     /translation="MLVSSNVTMQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFM
                     KILGGDLEPTLGNVSLDPNERIGKLRQDQFAFETFTVLDTVIMGHGELWEVKQERDRI
                     YALPEMSEEDGYKVADLEVKYGEMDGYSAEARAGELLLGVGIPLEQHYGLMSEVAPGW
                     KLRVLLAQALFSNPDILLLDEPTNNLDIDTIRWLEQVLNERDSTMIIISHDRHFLNMV
                     CTHMADLDYGDLRVYPGNYDEYMTAATQARERLLADNAKKKAQIAELQSFVSRFSANA
                     SKSRQATSRARQIDKIKLEEVKASSRQNPFIRFEQDKKLFRNALEVEALTKGFDNGPL
                     FKNVNLLLEVGEKLAVLGTNGVGKSTLLKTLVGDLDADHGTVKWSENARIGYYAQDHE
                     YEFENDLTVFEWMSQWKQEGDDEQAVRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFG
                     KLMMQKPNILIMDEPTNHLDMESIESLNMALELYQGTLIFVSHDREFVSSLATRVIEI
                     TPERVVDFSGNYDDYLRSKGIES"
     gene            10591..>11095
                     /locus_tag="MOX77_003422"
     CDS             10591..>11095
                     /locus_tag="MOX77_003422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HCA3358860.1"
                     /translation="MNMKLTTLFAAAFAVVGFCKTASAVTYPLPTDGSRLIGQNQVIT
                     VPEGNTQPLEYFAAEYQMGLSNMLEANPGVDTFLPKGGTVLNIPQQLILPDTVHEGII
                     INSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE
                     YRAAGEPL"
BASE COUNT         2559 a         3100 c         2940 g         2496 t
ORIGIN      
        1 gtggaaaaga tatccggcga aacgcgcgcc atcccctgtg aaaaggcaaa gttttccgcc
       61 ccttccccca ccatgagtac atgcgggctg cgctccatca ccagtctggc ggcgagcaca
      121 ggatggcgaa catgactcac gcccgcgacg gctccggctt tcagggtatt gccgtccatc
      181 acgcaggcat ccagttcatg agttccgtct cgggtataga ccgcgccgat acccgcattg
      241 aagagcggac acgcttccag caggcgcacc gcttccgtca ctacatcaag cgcgctgtca
      301 cccgcttcca gcatcttttg cccgctttcg acaatctctg acagcgcctg gatatagcgt
      361 agctcctgct catggctcat ttgcgcgcga gcaatcgcgc ctgcgccgcc gtgaatcgca
      421 atcactgctt tattcatttt tagggtccat taacggtggc acacaacttt tactataact
      481 atcagaattg ttgtgagtta ttcattcgat ttttgaatat agaaagatgc gtaaggtatg
      541 taaaggcgca aggccgtctc taagactgag gtagcatact gcccgccact gttttctgac
      601 ataatagccg gattcgattt tgcctcgcag gagtatgttc atggaatttt ccgccggatt
      661 gatgccgctt gaaacggcgc tgacccagat gctttcacgt attaccccgc tcaccgccgt
      721 agaaacgttg ccgctgatga actgctttgg ccgcatcctg gcgaccgata tcgtatctcc
      781 ccttgatgtc cccggctttg ataattcagc tatggatggt tatgcggtac gtgtggcgga
      841 tttgtccgcc gataagccgc tgcccgtcgc cggcaaagca tttgccggtc agccttacca
      901 aggagaatgg cctgcgggaa cctgtattcg cattatgacc ggcgccccgg tgccggcagg
      961 ttgcgaggcg gtcgtcatgc aagagcagac ggaacaaact gatgacggcg tgcgttttac
     1021 caccgatgtt cgttgcggac aaaacatccg ccgccgcggc gaggatattc gccaggatgc
     1081 ggtggtcttt ccagccggta cgcgcctgac tactgccgaa ctgccggtgc tggcgtcgct
     1141 gggaattgcc gatgcgcagg tagtacgtaa agtgcgcgta gcgctgttct cgaccggcga
     1201 cgagctccag cttccgggcc agctgctgga ggcgggacaa atttatgaca ctaaccgtct
     1261 aactatacat ttgatgctgc aacagcttgg ctgcgaagtg atcaatttag gcattattcc
     1321 tgacgatccc ggtaagcttc gcgccgcgtt tgtcgacgcc gacagccagg ccgatgtagt
     1381 gataagctcc ggcggcgtct cggttggtga agcggactat accaaaacca tccttgagga
     1441 gctgggcgaa atcgccttct ggaagctggc tatcaagcca ggcaaaccgt ttgccttcgg
     1501 caagctcagt aatagctggt tctgtggcct gccggggaat ccagtctctg cggcgctcac
     1561 gttttatcaa ctggttcagc ccttactggc gaagcttggc ggcaatacgg caagcgctgt
     1621 accgccgcgc cagcgtgtac gcacaacatc tcgcctgaag aaaacgccgg ggcgtctcga
     1681 tttccagcgc ggcatcctgc aacgtagcgc caacggcgaa ctggaggtca cgaccaccgg
     1741 acaccagggc tcacatattt tcagctcgtt taatctgggc aactgcttta ttgtgctgga
     1801 gcgtgaacgc ggcaatgttg agccgggaga atgggtggaa gtcgagccgt ttaatgctct
     1861 gttcggaggc ctgtaatggc ggaacttagc gaccaggaga tgctgcgcta taaccgacaa
     1921 attattctgc gcggcttcga ttttgaaggg caggaagcgt taaaagatgc gcgggtatta
     1981 gtggtcgggc tgggcggact cggctgcgcg gcaacgcagt atctggccgg cgctggcgtc
     2041 gggcaactga cgctactcga ttttgatacc gtttccgttt ccaatctcca gcgtcaaacc
     2101 ttgcacagcg acgccacggt cgggcagcca aaggtagagt ccgcccgcga cgcgctggcg
     2161 cgaatcaacc cgcatattac cattacgccc gttaacgcgc ggctggacga cgacgctatg
     2221 accagcctga ttgccgggca ttcgctggtg ctggactgta ccgataacgt tagcgtacgt
     2281 aatcaactta acgccgggtg ctatatcgcg aaagtgccgc taatctccgg cgcggccatt
     2341 cgtatggaag gacaagttac cgtctttacg tatcgggaaa acgaaccctg ttaccgctgc
     2401 ctgagccgtc tgtttggcga aaacgctctg acctgcgtag aagctggggt gatggcgccg
     2461 ctgattggcg tgatcggttc gctacaggca atggaggcca ttaagctact ggcgcattac
     2521 ggtcagcctg ccagcggaaa aatcgtcatg tacgatgcga tgacctgtca gttccgcgaa
     2581 atgaagttga tgcgcaaccc cggctgtgag gtctgcgggc agtagtcact ttacggataa
     2641 acataccaaa gcacggtcta tggccgtgct gtatcaacag ataattactg ccatcagacg
     2701 caaagccagc ttacccaagc tccgactgac gatcggctca agcagcgcgg catcatctta
     2761 aacgccatat cacagcctca acccgtgatg ttgtacctca tttaacgcct ctttgtcaga
     2821 acctctccat tcgttgacgc acatcaagat aactttcatt cgaaagtaat ttaatcttta
     2881 catgaaataa gagaggccgt ttatgatctt caatattcag cgctattcca cccacgatgg
     2941 ccccggtatc cgtaccgtag tatttctcaa aggctgttcg ttgggctgtc gctggtgcca
     3001 gaacccggaa agccgcgccc gcgctcagga tctgttatac gacgcgcggc tgtgtctcga
     3061 aggatgcgac ctgtgcgcgc aagccgcgcc ggacgtcatt gagcgcgcgc taaacggcct
     3121 gctcatccat cgcgagaaac tgaccgacgc ccatttttcc atcctggcgc attgctgccc
     3181 cacacaggcg ttaaccgtgt gcggcgaaat aaaaagcgtg gatgagatca tggcgacggt
     3241 actgcgcgat aaaccttttt acgatcgcag cggcggcggt cttacgcttt ccggcggcga
     3301 accgtttatg cagccggagc tggcggcaga gctgtttaaa gccagccatg acgccggtat
     3361 tcatacagcg gttgagacct gtctgcatgt cccatggaaa tacattgcgc cctcactgcc
     3421 ttatatcgat ctgtttctgg ctgatttgaa acacgtcgcc gacgggccgt ttaagcagtg
     3481 gaccgatggc agcgcctcgc gggtgctgga aaatctcagg aaactcgccg ccgcgggcaa
     3541 aaaaatggtg attcgcgtcc cgctgattca gggatttaat gccgatgagg agaccattaa
     3601 agccattacc gactttgccg ccgacgaact gcacgtcggg gaaattcatt ttctgcccta
     3661 ccacacgctg ggcatcaata aataccactt actcagtcag ccctatcatg ccccggataa
     3721 accactggat gcaccggcgt tacttgattt tgcccagaag tacgcctgcc aaaaaggttt
     3781 aaccgcgacc ctacgaggat aattatcatg acccaactga aactggacac gctcagtgac
     3841 cgcattaagg cgcacaaaac cgcgctggta catatcgtga aaccgccggt ctgtaccgag
     3901 cgcgcgcagc attataccga aatgtatcag caacatctgg ataaaccgat tccggtacgc
     3961 cgcgcgctgg cgctggccca tcacctggcg gaacgcacta tctggataaa acacgatgaa
     4021 ctgatcgtcg gcaaccaggc aagtgaagtc cgcgccgcgc cgattttccc ggaatatacc
     4081 gtctcgtgga ttgaaaaaga gatcgacgac ctggcagacc ggcccggcgc aggtttttcc
     4141 gtaagtgaag aaaacaaacg tattctgcac gacgtctgtc cgtggtggcg cggtcaaacc
     4201 gtccaggatc gctgctacgg catgtttacc gatgaacaaa aagggcttct ggcgactggc
     4261 attatcaaag ccgaaggtaa tatgacttcc ggtgacgcgc acctggcggt gaacttcccg
     4321 ctgctgctgg aaaaagggct tgatgacctg cgcgataaag tcgccgagcg ccgctcacgc
     4381 atcaacctga ccgtgctgga agatctgcat ggcgagcagt tcctgaaggc gattgatatt
     4441 gtgctggacg cggtaagcca gcatatcacg cgctttgccg cgctggcgcg ccagatggcg
     4501 ggcgaagagt cccgtgaaag ccgtcgtaaa gagctactta ccatcgcgga aaactgcgag
     4561 gtgatcgccc accaaccgcc gcagaccttc tggcaagcac tgcaattgtg ctacttcatc
     4621 caactgattc tacaaattga gtctaacggt cactcggtgt catttggtcg tatggaccag
     4681 tatctttacc cctattatcg tcgcgatgtc gaactaaacc agacgctgga tcgtgagcac
     4741 gccattgaac tgctgcacag ctgctggctg aaactgctgg aagtaaacaa gatccgctcc
     4801 ggttcgcact ctaaagcttc cgcgggcagc ccgctgtatc aaaacgtcac cattggcggt
     4861 cagaatctta tcaacggtca gccaatggac gcagtgaatc cgctgtctta cgctattctg
     4921 gagtcctgcg gacgtttgcg ttctacccag cccaacctca gtgtgcgtta tcacgccgga
     4981 atgagtaacg atttccttga cgcctgcgtc caggtcatcc gctgcggctt tgggatgccg
     5041 gcgtttaaca atgatgaaat cgtcatcccg gaatttatca agttggggat cgaaccacag
     5101 gacgcttacg attacgcggc gatcggctgt atcgaaaccg ccgtcggcgg gaaatggggt
     5161 tatcgctgca ccggcatgag ctttattaac ttcgcccgcg tcatgctggc ggcgctggaa
     5221 ggcggtcgcg acgccaccag cggcaaggta tttctgccgc aggaaaaggc gctctccgca
     5281 ggcaacttta acaattttga cgaagtgatg gccgcctggg atacccaaat tcgctactac
     5341 acgcgcaaat cgatcgaaat tgagtatgtg gtcgacacca tgctggaaga gaacgtccac
     5401 gatattctgt gctcagcgct ggtagacgac tgtattgaac gcgcgaagag tatcaagcaa
     5461 ggcggcgcaa aatatgactg ggtatccggt ctgcaggtcg gtatcgccaa cctgggcaac
     5521 agcctcgccg ccgtgaaaaa actggtcttc gaacagggcg ttatcggtca acagcagctt
     5581 gccgccgcgc tggccgatga ctttgacggg ctgccccatg aacagctgcg ccagcgtctg
     5641 attaacggcg cgccgaaata cggtaacgac gatgacagtg tcgataccct gctggcgcgc
     5701 gcttatcaga cctatattga tgagctgaag caataccata acccgcgcta tggtcgtggc
     5761 cctgtgggcg gcaactatta cgccggtacg tcctctatct cagcaaacgt gccatttggc
     5821 gccgcaacta tggctacccc ggatggtcgc aaagcgcata caccgctggc ggaaggcgca
     5881 agccctgcat cgggtacgga tcatctcggc ccgacggcgg tgattggttc cgtaggcaaa
     5941 ttacctaccg gttccattct cggcggcgtg ctgctcaatc agaaactgaa cccaacgacg
     6001 ctggaaaacg aatccgacaa acagaaactg atggttctgc tacggacgtt ctttgaggtg
     6061 cataaaggct ggcatattca gtacaacatc gtgtcacgcg aaacgctgct ggatgcgaaa
     6121 aaacatccgg accagtaccg cgatctggtc gtgcgtgtgg caggctactc cgccttcttc
     6181 accgcgctgt cgccggacgc gcaggacgat atcatcgccc gtaccgaaca tatgctgtaa
     6241 tttgcccagg cgccatcggc aatatgtccg aactgcctga tggcgctacg cttaacaggc
     6301 ctacgcaggc ctgttaatca gaagggatcg gtgccgtcaa gcacggcctg aatgacgttg
     6361 agcgcgcctt gatggttatt atcatcagtg tgataacgtg aaagcgcttt gatattgtct
     6421 gcggcattgc ccatggcaaa agagtaatgc gccattttca acatttccgc atcattaccg
     6481 ctgtcgccaa tggcgacgac attctgtggc gacctgttcc agcgctttaa cagacgactg
     6541 atgccattcg ctttatgcag tcccgggata atcaggtcga taaaaccgaa gccgctggtg
     6601 acaggcttca tgatgccatc cagagatacg tgcagtttgt cgataaccag cggaatttgt
     6661 tcatcgggca aattcaggga gaacttaaac aggatatcgt caatgtcgtg ataatcgttt
     6721 accggctgca ggcggtgata atgtttggcc atcagcgcca cgaaagtctc gggagcgttt
     6781 ttgctgacat aagcgctttt cagaccgcag gcgacgaagt taagctgctt atccttcagc
     6841 agttcgccaa tcacaatacg cgattcatgc cgggttagct ctccgtgaaa caactgcttg
     6901 ccatgttcat acaccagcgc gccattttct gcgacgaagg aaatttcgtc tttcagctcg
     6961 gggaagaagg agatcaactg atagtactga ttaccgctgg cgaccacaaa ttcgatatta
     7021 cgttttttca gttcctggta ttgcgccatg aagcgtacac gatcgtactg cttggcatcg
     7081 tcgagaaaag tgccgtccat atcggtaacg acaacgttaa cggtcatact taagctcctg
     7141 gctgtaactg cgaccagaaa cattttaata acaatgtgag cagaaccaca aatttatttc
     7201 gaatgaaaag tggctgaacg aaaggaatag ccgcataaga cattaaggcg tcctggccac
     7261 cttacgtttt cctctcgctt ccctccttgt gcgcccctgc aatattttaa acttgcatta
     7321 accttatttt aacttaaagt atcacatgta actaatttta ctttcgaacg aaagatggtg
     7381 aggttgatat gacgactcct tttacctacg aaacgctgcc cgccgaccca aaagcggcca
     7441 ttcgtcagat gaagcaggcg ctacgcgcgc aaatcggcga cgtacaggcg gtgttcgacc
     7501 gtttgagcgc caccatagca gcccgggtgg cggaaattaa cgatctgaag gcgcagggac
     7561 agccggtatg gccaattatc ccttttagcg aactggcgac gggcaacatt agcgatgcta
     7621 cccgcgccga ggttaagcgc cgcgggtgcg cggtgattaa aggtcatttt ccacgcgaac
     7681 aggcgctggc atgggaccag tcgatgctcg actatctgga caagaaccat tttgacgagg
     7741 tgtataaagg accgggggat aattttttcg gtacgctgag cgcctcccgg cctgaaatct
     7801 atcctgtcta ctggtcgcag gcgcaaatgc aggcccgcca aagtgaagag atggcgctgg
     7861 cgcagtcgtt cctcaaccgt ctgtggcagg tagagcgcga cggcaagcga tggtttaatc
     7921 cggatatcag catcatttac ccggatcgca tccgtcgccg cccgccgggc accacatcca
     7981 aaggactggg agcgcatacc gactccggcg cgctggagcg ctggctgcta ccagcctatc
     8041 agcaggtatt cgccagcgtg tttaacggca acgtcgagca gtacgatccg tggaatgcgg
     8101 cgcaccgtac cgaagttgaa gagtacacgg tggataacac cacaaaatgc tcggtatttc
     8161 gcaccttcca gggctggacc gcgctctccg atatgctgcc cggtcagggg ttgcttcatg
     8221 tcgtccctat tccggaggcg atggcgtata ttctgctgcg cccgctgctg gatgatgtcc
     8281 cggaagatga attatgcggc gtcgcgccgg gccgggtgct gccgatttct gaacagtggc
     8341 atcctttact gatggcggcg ttaaccagca ttccgccgct ggaagccggg gattccgtgt
     8401 ggtggcattg cgatgtcatc cactccgtcg cccccgtcga aaatcagcag ggctggggca
     8461 atgtgatgta cattcctgcc gcgccaatgt gtgagaaaaa tctggcctat gcgcgtaagg
     8521 tgaaagcggc gctggagaca ggcgcatcac cggacgattt cccgcgcgag gactatgaaa
     8581 ccacctggga agggcgtttc acgctgcgcg atctgaatat tcacggcaag cgggcattag
     8641 gtatggacgt ttgacggtcg tacagccctg cccgctcaac tgcggtgtgc cctttgtctg
     8701 ggcgcacccg tcttaccaga tctacgcgcc aggatacgta ggcccggtaa gcacagcgcc
     8761 accgggcgtc agtgtttagc tttcaatccc tttactacgc aaataatcgt cgtagttacc
     8821 gctgaagtcc accacgcgct ccggcgtaat ttcaatgacg cgggttgcca gcgagctgac
     8881 gaactcacgg tcgtgcgaaa caaagatcag cgtgccctga tacagctcca gcgccatatt
     8941 cagcgattcg atcgactcca tatccaggtg gttagtcggt tcgtccatga tcaggatatt
     9001 cggcttttgc atcatcagtt tgccgaacag catacggccc ttctcgccac cggagaggac
     9061 tttcgcaggc tttttgatat catcctggct aaataacagg cggcccagaa tactgcgcac
     9121 tgcctgctcg tcgtcgcctt cctgtttcca ctgactcatc cattcaaaca ccgtcaggtc
     9181 attttcgaat tcatattcgt ggtcctgcgc gtagtaacca atacgcgcgt tttccgacca
     9241 tttaacggtg ccgtgatcgg cgtccagatc gccaaccagc gtcttcagca gcgtagattt
     9301 acccacgcca ttggtgccga gtaccgccag cttctcgccg acttcgagca gcaaattgac
     9361 atttttaaac agcggaccgt tatcaaaacc tttcgtcagc gcctccactt ccagagcgtt
     9421 acggaacagt tttttatcct gctcaaaacg gatgaacggg ttctgacggc tggaggcttt
     9481 cacctcttcc agcttgattt tatcaatctg ccgcgcgcgc gacgttgcct gacgcgattt
     9541 agaggcattg gcgctaaaac ggctaacaaa agattgcagc tcggcaattt gcgctttttt
     9601 cttcgcatta tcggccaaca gacgttcacg cgcctgggtc gccgccgtca tatactcatc
     9661 atagttaccc ggatagacgc gcaagtcacc gtaatccaga tccgccatat gcgtacaaac
     9721 catgttcagg aagtgacggt cgtgcgaaat gatgatcatc gtgctatcgc gctcgttcag
     9781 cacctgctcc agccaacgga tagtatcaat atccaggttg ttggtcggtt cgtcgagcaa
     9841 caggatgtcc ggattagaga ataacgcctg cgccagtagc acacgcaatt tccagcctgg
     9901 cgcgacttca ctcatcagac cgtaatgctg ctccagcggg atgcccaccc ccaacagcag
     9961 ttcgcccgca cgcgcctcag cggaataacc gtccatctcg ccgtatttta cttccagatc
    10021 ggcgacttta tagccgtctt cttcgctcat ttccggcaag gcatagatac ggtcgcgctc
    10081 ctgcttgact tcccacagtt cgccatgccc cataatgaca gtatcaagta cggtgaatgt
    10141 ttcaaaagcg aactggtcct gacgcagctt accgatgcgc tcattcggat cgagggaaac
    10201 attgcccagc gtcggctcca ggtcgccgcc gaggattttc ataaaagtgg actttccgct
    10261 accgttggcg ccgatcaggc cgtaacggtt gccgccgcca aatttgacgg aaatattttc
    10321 gaacagcggc ttactgccga actgcatggt aacgttgctg gaaactaaca caggcttatc
    10381 ctgaaaaaag atgtgacaaa ccgcttatta tgccacaagt ctgaaataag atcgcgccct
    10441 atacaaaggg ctacactgaa ccgtaagggg aaaaaaacgt gatttcgtac acatctgaat
    10501 tccctgttta ctggaatgca cctataatgc gctcccaaca tgacagaatt ctcaacctac
    10561 tagcctgctt ggcacagaat ctcgcataac atgaatatga aattaacaac gcttttcgcg
    10621 gcggctttcg ctgtagttgg tttttgtaaa acagcctcag cagtcactta cccgctgcct
    10681 accgatggta gccgtttaat tgggcaaaat caggtcatca ccgttccgga gggcaatacc
    10741 cagccgctgg agtattttgc cgcggagtat cagatggggc tctccaacat gctggaagcc
    10801 aaccctggcg tggatacctt cctgccgaag ggcggtaccg tgctgaatat tccgcagcag
    10861 ctgatcctgc cggataccgt acacgaaggc attatcatca atagcgcgga aatgcgcctc
    10921 tattactacc cgaaaggcac aaacaccgtt atcgtcctgc cgattgggat cggtcagtta
    10981 ggtaaagaca cgcctatcaa ctggacgacc aaagttgaac gtaaaaaagc cggtccgacc
    11041 tggacgccta cggcaaaaat gcacgctgaa tatcgcgccg ccggcgagcc gctgc
//
LOCUS       DAGWFR010000132        11079 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.134, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000132 DAGWFR010000000
VERSION     DAGWFR010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 11079)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11079)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11079
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.134"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..871)
                     /gene="yedA"
                     /locus_tag="MOX77_003423"
     CDS             complement(<1..871)
                     /gene="yedA"
                     /locus_tag="MOX77_003423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="drug/metabolite exporter YedA"
                     /protein_id="HCA3358861.1"
                     /translation="MRFRQLLPLFGALFALYIIWGSTYFVIRIGVESWPPLMMAGVRF
                     LSAGMLLMAFLLLRGEKLPPLRQTINAALIGLLLLAVGNGLVTVAEHQNVPSGIAAVV
                     VATVPLFTLCFSYFFGIKTRKLEWVGIAIGLAGIILLNSGGNLSGNPWGAILILIGSM
                     SWAFGSVYGSRIALPVGMMAGAIEMLAAGVVLLCAAFLSGEKLATLPGLSGFMAVGYL
                     ALFGSIIAINAYMYLIRNVSPALATSYAYVNPVVAVLLGTGLGGERLSPVEWAALGVI
                     VFAVVLVTLGKYLF"
     gene            1041..1958
                     /locus_tag="MOX77_003424"
                     /pseudo
     CDS             1041..1958
                     /locus_tag="MOX77_003424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310723.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF808 domain-containing protein"
     gene            2035..2220
                     /locus_tag="MOX77_003425"
     CDS             2035..2220
                     /locus_tag="MOX77_003425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001549490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YodC family protein"
                     /protein_id="HCA3358862.1"
                     /translation="MVFSVSEEVTVKEGGPRMIVTGYSSGMVECRWYDGFGVKREAFH
                     ENELVPGKERRVRDEAR"
     gene            2385..4088
                     /gene="yedQ"
                     /locus_tag="MOX77_003426"
     CDS             2385..4088
                     /gene="yedQ"
                     /locus_tag="MOX77_003426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis regulator YedQ"
                     /protein_id="HCA3358863.1"
                     /translation="MPHETLLDNQGWFKKLARRFGPGHVVNTCFLIVMLFSTLLTWRE
                     VMILKDAYVASQRNHLGSVANVLDRQLQFNMDRLIFLRNGMHEALVAPLAFSALQSAV
                     TQFEQRRVRHFWQLELDKRRTLPLYGVSDQFVARTTLLSRESRDLANELTATLELGYL
                     ARSSAMLTLETMYVSRSGFYLSTLPTAYGSDIVSRYYQYVTQPWFIEQSQRRNPQRGV
                     RWFTSAQPYVADEQKKVTASLPLDHDNYWYGVLAMDIPVASLQQFLRDAAEKDIEGEY
                     QLYDNHLRLLTDSAPEQQTENTLNDRERALLAREIEKDTLGGLRLGTHYVSWERLDHF
                     DGVLLRVHTLREGIQGNFGSISIALTLLWGLFTAMLLISWGVIRHMVKNMFVLQNSPQ
                     WQAWHDPLTRLYNRGALFEKASRLAKRYREARQPFSVIQLDLDYFKSVNDRFGHQAGD
                     RVLSHAAGLIGSTIRAHDIAGRVGGEEFCIVLPGATKAQALQIAERIRQRINDKEILV
                     TKSTTLRISASMGISSAEEYGDYDFEQLQSLADKRLYYAKQSGRNRICASDATQEREK
                     K"
     gene            complement(4067..4882)
                     /locus_tag="MOX77_003427"
     CDS             complement(4067..4882)
                     /locus_tag="MOX77_003427"
                     /EC_number="3.1.3.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannosyl-3-phosphoglycerate phosphatase-related
                     protein"
                     /protein_id="HCA3358864.1"
                     /translation="MLSIHDPLLIFTDLDGTLLNSHTFEWQPAAPWLTRLHESGVPVI
                     LCSSKTAAEMLQLQTTLNLQGLPLIAENGAVIQLDVHWEDHPNYPRLIAGISHNEIRL
                     VLHKLREKEQFKFTTFDDVDDQVISEWTGLNRAQSALTRLHEASVSLIWRDSDERMAQ
                     FVARLNDLGLQFVHGARFWHVLDASAGKDQAANWLIEAYRRQWRARPLTLGLGDGPND
                     APLLDVMDYAVVVKGLNREGVHLRNDDPQRVYRSQNEGPDGWREGMDYFFSRS"
     gene            complement(5192..5419)
                     /gene="yodD"
                     /locus_tag="MOX77_003428"
     CDS             complement(5192..5419)
                     /gene="yodD"
                     /locus_tag="MOX77_003428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YodD family peroxide/acid resistance protein"
                     /protein_id="HCA3358865.1"
                     /translation="MKTAKEYSDTAKREVSVDVDALLAAINEISESEVHRSQEDPERV
                     SVDGREYHTWHELAEAFELDIHDFSVTEVNR"
     gene            5548..5742
                     /gene="dsrB"
                     /locus_tag="MOX77_003429"
     CDS             5548..5742
                     /gene="dsrB"
                     /locus_tag="MOX77_003429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001736680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein DsrB"
                     /protein_id="HCA3358866.1"
                     /translation="MKVNDRVTVKTDGGPRRPGVVLAVEEFSEGTMYLVSLEDYPLGI
                     WFFNESGHQDGIFVEKAEQD"
     gene            complement(5781..6404)
                     /gene="rcsA"
                     /locus_tag="MOX77_003430"
     CDS             complement(5781..6404)
                     /gene="rcsA"
                     /locus_tag="MOX77_003430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator RcsA"
                     /protein_id="HCA3358867.1"
                     /translation="MSTIIMDLCSYTRLGLSGYLVSRGVKKREINDIETVDELAIACG
                     AHQPSVVFINEDCFIHTPSDSQQIKQIINQHPDTLFIVFMAIANVHFDEYLLVRKNLL
                     ISSKSIKPDSLDTLLGDILKKESGISGTINLPTLSLSRTESSMLRMWMEGQGTIQISD
                     RMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVRLTDNVTNGIFANMR"
     gene            complement(6686..7480)
                     /gene="fliR"
                     /locus_tag="MOX77_003431"
     CDS             complement(6686..7480)
                     /gene="fliR"
                     /locus_tag="MOX77_003431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system protein
                     FliR"
                     /protein_id="HCA3358868.1"
                     /translation="MIQVISEQWLYWLHLYFWPLLRVLALISTAPILSERAIPKRVKL
                     GLGIMITLVIAPSLPANDTPLFSIAALWLAMQQILIGIALGFTMQFAFAAVRTAGEFI
                     GLQMGLSFATFVDPGSHLNMPVLARIMDMLAMLLFLTFNGHLWLISLLVDTFHTLPIG
                     SNPVNSNAFMALARAGGLIFLNGLMLALPVITLLLTLNLALGLLNRMAPQLSIFVIGF
                     PLTLTVGIMLMAALMPLIAPFCEHLFSEIFNLLADIVSEMPINNNP"
     gene            complement(7489..7758)
                     /gene="fliQ"
                     /locus_tag="MOX77_003432"
     CDS             complement(7489..7758)
                     /gene="fliQ"
                     /locus_tag="MOX77_003432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013365797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FliQ"
                     /protein_id="HCA3358869.1"
                     /translation="MTPESVMMMGTEAMKVALALAAPLLLVALITGLIISILQAATQI
                     NEMTLSFIPKIVAVFIAIIVAGPWMLNLLLDYVRTLFSNLPYIIG"
     gene            complement(7768..8505)
                     /gene="fliP"
                     /locus_tag="MOX77_003433"
     CDS             complement(7768..8505)
                     /gene="fliP"
                     /locus_tag="MOX77_003433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460932.1"
                     /note="The bacterial flagellar biogenesis protein FliP
                     forms a type III secretion system (T3SS)-type pore
                     required for flagellar assembly; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system pore protein
                     FliP"
                     /protein_id="HCA3358870.1"
                     /translation="MRRLLFLSLAGLWLFSPAAAAQLPGLISQPLAGGGQSWSLSVQT
                     LVFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMS
                     PVIDKIYVDAYQPFSEQKISMQEALDKGAQPLRAFMLRQTREADLALFARLANSGPLQ
                     GPEAVPMRILLPAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPATIA
                     LPFKLMLFVLVDGWQLLVGSLAQSFYS"
     gene            complement(8505..8882)
                     /gene="fliO"
                     /locus_tag="MOX77_003434"
     CDS             complement(8505..8882)
                     /gene="fliO"
                     /locus_tag="MOX77_003434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460931.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system protein
                     FliO"
                     /protein_id="HCA3358871.1"
                     /translation="MMKTEATVSQPTAPAGSPLMQVSGALIGIIALILAAAWVIKRMG
                     FAPKGNSVRGLKVSASASLGPRERVVIVEVENARLVLGVTASQINLLHTLPPAENDTE
                     APVAPPADFQNMMKSLLKRSGRS"
     gene            complement(8882..9295)
                     /gene="fliN"
                     /locus_tag="MOX77_003435"
     CDS             complement(8882..9295)
                     /gene="fliN"
                     /locus_tag="MOX77_003435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliN"
                     /protein_id="HCA3358872.1"
                     /translation="MSDMNNPSDENTGALDDLWADALNEKKATTNKSAADAVFQQLGG
                     GDVSGAMQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILIN
                     GYLIAQGEVVVVADKYGVRITDIITPSERMRRLSR"
     gene            complement(9292..10296)
                     /gene="fliM"
                     /locus_tag="MOX77_003436"
     CDS             complement(9292..10296)
                     /gene="fliM"
                     /locus_tag="MOX77_003436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005127760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliM"
                     /protein_id="HCA3358873.1"
                     /translation="MGDSILSQAEIDALLNGDSDTKDEPTPGIASDSDIRPYDPNTQR
                     RVVRERLQALEIINERFARQFRMGLFNLLRRSPDITVGAIRIQPYHEFARNLPVPTNL
                     NLIHLKPLRGTGLVVFSPSLVFITVDNLFGGDGRFPTKVEGREFTHTEQRVINRMLKL
                     ALEGYSDAWKAINPLEVEYVRSEMQVKFTNITTSPNDIVVNTPFHVEIGNLTGEFNIC
                     LPFSMIEPLRELLVNPPLENSRHEDQNWRDNLVRQVQHSELELVANFADIPLRLSQIL
                     KLKPGDVLPIEKPDRIIAHVDGVPVLTSQYGTVNGQYALRVEHLINPILNSLNEEQPK
                     "
     gene            complement(10301..10768)
                     /gene="fliL"
                     /locus_tag="MOX77_003437"
     CDS             complement(10301..10768)
                     /gene="fliL"
                     /locus_tag="MOX77_003437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body-associated protein FliL"
                     /protein_id="HCA3358874.1"
                     /translation="MTDSAINKKSKRSIWIPLLVLITLAACATAGYSYWRMQQQPTTN
                     AKAEPAPPPAPVFFVLDTFTVNLGDADRVLYIGVTLRLKDEATRARLNEYLPEVRSRL
                     LLLFSRQNAAELSTEAGKQKLIAAIKETLAAPLVAGQPKQVVTDVLYTAFILR"
     gene            complement(10873..>11079)
                     /locus_tag="MOX77_003438"
     CDS             complement(10873..>11079)
                     /locus_tag="MOX77_003438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-length control protein FliK"
                     /protein_id="HCA3358875.1"
                     /translation="QLAESGIQLGQSSISSESFAGQQQSSSQQQSARAQHTDAFGAED
                     DIALAAPASLQAAARGNGAVDIFA"
BASE COUNT         2752 a         2824 c         2928 g         2575 t
ORIGIN      
        1 gaaacaggta cttacccaga gtcactagca ctacggcaaa cacaatcacg cccagcgcgg
       61 cccattcaac gggcgataac ctctcaccgc ctaggccagt gccaagcaac acggcgacaa
      121 ccggattcac ataggcgtag ctggtcgcca gcgccggact gacgttgcga atcaggtaca
      181 tataggcatt aatggcgata atagaaccga ataacgccag gtagccgacg gccataaacc
      241 ccgataaacc aggcagcgtg gcgagctttt cgccggaaag aaacgccgcg caaagcaata
      301 ccacgcccgc cgccagcatt tcaatcgcgc ccgccatcat gcccacaggc agggcgatgc
      361 gcgagccgta aacggaacca aatgcccagc tcatcgaacc tatcaggatc aaaatcgcgc
      421 cccacggatt gccgcttaaa ttaccgccgc tgttcagcag aataatcccg gcaagtccaa
      481 tggcaatccc cacccattct aatttgcgcg ttttaatacc aaaaaagtag ctaaagcaca
      541 gcgtaaatag cgggacagtg gcgaccacga cggcagcaat gcccgatggc acgttttgat
      601 gctccgccac cgtcaccaga ccgttaccca ccgccagcag cagtaggcca atcagcgcgg
      661 cgttgatggt ctggcgcagc ggcggaagtt tttcgccgcg caacagcaaa aacgccatga
      721 gcaacatccc cgccgagaga aaacgtacgc ctgccatcat tagcggcggc cagctttcaa
      781 cgcctatgcg gataacaaaa taggtagacc cccaaatgat gtacaaggca aaaagcgcgc
      841 caaaaagagg taataactgc cggaaacgca taatcactca cggtgaaata aaaagggtga
      901 atatagtaaa cgtcaaaatt attatgctgg cgagcattat aattgtcctt ttggaataaa
      961 aaggcgttga cccgcgccgc cggtttcggc attgcgcgtt ttgctacata cttaacgtct
     1021 tagaagaaaa gaccgaggaa atcattttgg caggaagtag cttactgaca ttactcgacg
     1081 atatcgccac gctgctggac gatatttcgg taatgggcaa attggccgcg aaaaaaaccg
     1141 caggcgtact gggggacgac ctgtcgctca atgcgcagca ggtgaccggc gttcgcgcta
     1201 atcgcgagct gccagtggta tggagcgtgg cgaaaggatc attaatcaac aaggttattc
     1261 tggtgccgtt ggcgctgttg ataagcgcat ttatcccgtg agccattacg cctttattaa
     1321 tgttaggcgg cgcgtttctc tgctttgaag gggtagaaaa agtcctgcat acctttgagg
     1381 cgcgaaaaca caaagaagac ctggcggagc ggcaaaaacg tcttgaggcg ctggctacgc
     1441 aagatccttt ggcctttgaa aaagataaag taaaaggggc ggtccgtacc gatttcattc
     1501 tttccgctga aattgtggca attaccctgg ggattgtcgc gcaggcaccg ctgcttaatc
     1561 aggtgttggt gctggcgggg attgcgttgg ttgtgaccat tggcgtgtat ggcctggtgg
     1621 gtattattgt caaactggat gatatggggt actggctggc ggaaaagcgt agcgtgctgg
     1681 cgcagggcgt cggtaaagga ttactgatta tcgcgccctg gttaatgaaa gcattatcca
     1741 ttgtcggtac gctggcgatg tttctggttg gcggcggaat tgtcgtacac ggtattgcgc
     1801 cgctacacca tgccattgaa cattttgcgc agcagcaggg ggctttcatg gcgcatacga
     1861 tccctgcggg gctgaatctg gtgctcggct ttattatcgg cgccattgtg gtggcgctgg
     1921 tgaaaggtgt ggcgaaaatt cgcggtgttt cgcactgatt ttctacaatg aattatgcaa
     1981 aattgtccat cctcgtctaa ggtgaaaacg tttcatctga tacaggaggc aggtatggtc
     2041 ttttctgtca gtgaggaagt taccgtgaaa gagggtggac cccggatgat cgtcaccggt
     2101 tattccagcg gaatggtaga gtgtcgctgg tatgatggtt ttggcgtaaa gcgggaggca
     2161 ttccatgaga atgagctcgt gccaggcaag gaaaggcgcg tgcgggatga agcccgatga
     2221 caaaacgccc ggttaatgcc gggcgttttg ctgtggagaa aaagagtcgt cgcgctgcga
     2281 catgctgcta cctggttatg ccaggattga gtggtatccc ttgatgaggt ctggctaccg
     2341 taagccatca gggggcgttg tatcaataac caggagttac cagggtgccg cacgaaacac
     2401 tgttagacaa tcaaggctgg tttaaaaagc tggcgcggcg ttttggtccc ggtcatgtcg
     2461 tcaacacctg ttttctgatc gtgatgctgt tctcgacgct acttacctgg cgggaagtta
     2521 tgatactgaa agacgcgtat gtcgccagtc agcgcaatca tctggggagc gtcgcgaatg
     2581 tccttgaccg ccaactgcaa ttcaacatgg acaggttgat ctttttacgc aacggtatgc
     2641 atgaagcgct ggtggcgccg ctggcttttt ccgcattgca aagcgcggtg acgcagtttg
     2701 agcaacgacg cgtcagacat ttctggcaac tggagttgga taaacggcgg acattgccgt
     2761 tatatggcgt ttccgatcaa tttgtcgccc ggacgacgct tctttcgcgg gagagtcgtg
     2821 acctggcaaa tgaattaacc gccacgctgg agttagggta tctggcgcgc tcatccgcca
     2881 tgctgacgct ggagacgatg tatgtttctc gctcagggtt ttacctctca actctcccta
     2941 cggcgtacgg tagcgatatt gtttcccgtt actatcagta cgtgacccag ccctggttta
     3001 tcgagcaaag ccaacggcgt aatccacagc gcggcgtgcg gtggtttacc tccgcacagc
     3061 cctatgttgc tgacgagcag aaaaaagtga cagccagtct accgctggat cacgataatt
     3121 actggtatgg cgtactggca atggatattc ccgtcgcgtc attacagcag tttctgcgcg
     3181 atgcggccga aaaggatatt gaaggggaat atcagctata cgataaccat ctccgtttgt
     3241 tgacggactc cgcgccggaa caacaaaccg agaatacgtt aaatgaccgt gagcgcgcct
     3301 tactggcgcg tgaaatagaa aaagataccc tgggcgggct gcgtttagga acgcattatg
     3361 taagctggga gcggctggat cattttgatg gcgtcctgct gcgcgtgcat acattacgtg
     3421 aaggtataca agggaatttt ggcagtatta gtatcgcgct gacgctgtta tgggggcttt
     3481 ttacggcgat gctgttgatc tcctggggcg ttattcgaca tatggtcaaa aatatgtttg
     3541 ttctgcaaaa ttcgccgcaa tggcaggcat ggcacgatcc gctgacccgg ctatataacc
     3601 gtggcgcgct gtttgaaaaa gcgtccaggc tggcaaagcg ctatcgggaa gcccgccagc
     3661 cattttctgt gatacagctg gatttagatt attttaaaag cgttaacgat cgctttggcc
     3721 atcaggcagg cgatcgcgtg ttgtcccatg ccgctgggct cattggcagc accattcgag
     3781 cgcacgacat cgccggacgg gtagggggcg aagagttttg tatcgtgctg cccggcgcga
     3841 cgaaagcgca ggcgctgcag attgccgaac gcatacgcca gcgcattaat gacaaagaga
     3901 ttctggtgac gaaaagcacg acgcttcgta tcagcgcgtc aatggggatc agtagcgcgg
     3961 aggaatacgg cgactatgat tttgagcagt tgcagtcgct ggccgacaaa cggctttatt
     4021 acgccaaaca gtccggacgt aaccgtattt gcgccagcga cgcgactcag gagcgggaaa
     4081 agaaatagtc cattccttcg cgccagccat ccggcccttc gttctggcta cggtagacgc
     4141 gctgaggatc gtcgttacgc aaatgtacac cctcccggtt tagcccttta acgacaaccg
     4201 cataatccat cacatccagt aagggcgcat cattggggcc gtctcctagc cccaacgtca
     4261 gaggacgcgc gcgccactgc cgacgatatg cttcaattag ccagttggca gcctgatctt
     4321 taccggcgga ggcgtccagc acatgccaga aacgggcgcc atggacaaat tgcagtccca
     4381 ggtcatttaa acgggcgaca aactgcgcca tgcgttcatc gctatcgcgc cagatcagcg
     4441 acaccgacgc ttcatgcaga cgggttaggg cagactgtgc ccggtttagg cccgtccatt
     4501 cgcttatcac ctgatcgtca acgtcatcaa acgtggtgaa cttaaactgt tccttttcac
     4561 gcaacttatg caggacgagg cggatttcgt tgtgagaaat accggctatc aggcggggat
     4621 agttgggatg gtcttcccaa tgaacgtcca gttggatcac cgcgccgttt tccgcaatca
     4681 gcggcagtcc ctgtagattt aacgtcgtct ggagctggag catttcagcc gcggttttac
     4741 tgctacagag gatcacaggc acgccgcttt catgcaggcg tgtaagccag ggggccgcgg
     4801 gctgccactc aaaagtgtgg ctgttcagca atgtgccgtc cagatcggta aaaatcagca
     4861 aggggtcatg gattgagagc attttttcct cattttccgt tgcaacggcg ggcttatttc
     4921 caggaaaaat cctaaagcac atccgaaaga agtcgaacgc taactggaac cgatcccgtc
     4981 gcttccaggc agcacatgcg ttgtcacact tttgctaccg aactattagc gcgcttaatc
     5041 attcatgtaa aaaatattta cttgtcatgc aaaaaaattg cagataaagt aaatctcaca
     5101 tcagatttcc tggtgtaacg aattttcaag tgcttcttgc ataagcaagt ttgatcccga
     5161 cccgtagggc cgggattttt ttcggccatt tttaacggtt tacttctgtt acactaaaat
     5221 catgaatatc cagctcgaat gcttcagcta attcatgcca tgtatgatat tcccgtccgt
     5281 ctacgctcac ccgctcagga tcttcctggc tacggtgaac ctcgctttcg ctgatttcat
     5341 tgatggccgc cagtagcgca tctacatcga cgctcacttc gcgcttggcc gtatcactgt
     5401 actcttttgc cgttttcatc ttcactacct cacgggttcc tgacagccta agtatagacc
     5461 gttgagaaaa ccagcaaaca cgccggcaag gcgctgtcag acgcagaaaa ttgttctaca
     5521 ctggcacaaa gcgacaggag gaaaatgatg aaggtgaatg atcgggtaac cgttaaaacg
     5581 gacggcggtc cccgccgacc gggcgtggta ctggcagtgg aagaatttag tgaaggcaca
     5641 atgtacctgg tttcgctgga ggattacccg ctcggcatct ggttcttcaa tgagtcaggt
     5701 caccaggatg gtatttttgt cgagaaggcg gagcaggact aattgagccg gactggaggt
     5761 acattgccag tccggatgtc tcagcgcatg ttagcaaaaa tgccgttagt gacgttatct
     5821 gtcagccgca ctacgtgata gatcacttgt ttattatgcg tttttatctt tctttttata
     5881 ttccccttat gggaggatac tgtttttgct ttaatattca ttctgtcaga aatctgaatg
     5941 gttccctgac cttccatcca cattcgtaac atgctggatt cagttcgact taacgataat
     6001 gttggtaaat ttatggttcc tgaaataccc gactcttttt tcagaatatc gccaagaagg
     6061 gtatccagcg agtcaggttt aatcgattta gagctaatca ataagttttt tcttactaat
     6121 aaatattcat caaaatgcac attagcaatt gccataaaaa caataaataa cgtgtcagga
     6181 tgctgattaa tgatttgctt tatttgttga ctgtctgaag gcgtatgaat gaaacagtcc
     6241 tcattaataa acaccaccga aggctgatgt gcgccacaag cgatagcgag ttcgtcaacg
     6301 gtttcgatgt cgttgatttc cctttttttc acccctctgc tgaccagata cccgcttaac
     6361 cctagccggg tgtaactgca taaatccata ataatcgttg acatggcata ccctcactca
     6421 atgcgtaacg ataattcccc ttacctgaat aactcaccat aatcagacgg aacacgaata
     6481 gtcaccttag acaacgctta cgcggttttt caggcgaact tactatcccg taaagttaca
     6541 tataatttgc caggaatcat cttaaagtaa agtgaatgtt gcgttatgtg agtgaagtaa
     6601 aaacaaataa ggggcagcgg atatatcctg gtgaatgttt tttaaaattt attttcggat
     6661 aaaccttagt aaaacaggat aaaaattatg ggttattatt tatcggcatc tcgctaacaa
     6721 tatcagcaag caaattgaaa atttcgctga ataaatgttc gcaaaacggc gcaattaatg
     6781 gcattagcgc ggccatcagc ataatgccga cggtgagggt aagcgggaaa ccgataacaa
     6841 atatcgagag ctgcggcgcc atgcggttta atagccccag cgccaggttg agcgtaagca
     6901 ggagggtaat gaccggcaat gccagcatca gtccgtttaa gaaaatgagc cctccggccc
     6961 tggcgagcgc cataaatgca ttactgttca ccgggttact accgatgggc agagtatgga
     7021 aggtatcgac cagcagcgaa ataagccaca aatggccatt aaaggtgaga aacagtagca
     7081 tggcgagcat atccataata cgcgccagaa ccggcatatt caagtggctg cccgggtcga
     7141 cgaaggtggc aaaggaaagc cccatttgca gaccgataaa ctcacctgcg gtacgcaccg
     7201 ccgcaaaggc gaattgcatg gtaaatccca gcgcaatacc gatcagaatt tgttgcatcg
     7261 ccagccataa ggcggcaata gaaaaaagcg gcgtatcgtt tgctggtagc gacggcgcga
     7321 taacgagggt aatcattatt cccaacccca gttttacccg cttgggaata gcgcgctcgc
     7381 tgagaatggg cgccgttgaa atcagcgcca gtacgcgcag caaaggccag aaatagagat
     7441 gcagccagta tagccattgc tcgcttataa cctgtatcat cgttctgttt atccgatgat
     7501 ataaggtaaa ttgctgaaca gagtgcgtac gtagtccagc agcaggttga gcatccacgg
     7561 gccggcaacg ataattgcga tgaataccgc gacgatttta gggataaacg acagcgtcat
     7621 ttcattaatc tgagtcgcgg cctgcaagat gctgataatg aggccggtaa tcagcgcgac
     7681 gagtaacagc ggcgcagcca gggcgagagc aactttcatc gcctcggtcc ccatcatcat
     7741 gacggattca ggagtcattt tgcgcctcta actgtaaaag ctttgggcca gcgaccccac
     7801 aagcaattgc caaccatcga ccagcacaaa cagcatcagc ttaaacggca gggcgattgt
     7861 cgctggcggc accatcatca tccctaacgc catcagtacg ctggcgatca ccaggtcgat
     7921 aatcaaaaaa gggatgaaaa tcgtaaaacc gatctgaaac gccgtcttta attcgctggt
     7981 gacataagcg ggcaggagga tacgcatcgg tactgcttcc ggtccctgta acggaccgct
     8041 attggccaga cgggcaaaca gcgccagatc ggcttcgcgg gtttggcgca gcatgaacgc
     8101 gcgtaacggt tgcgcgcctt tatccagcgc ttcctgcata gaaattttct gctcgctaaa
     8161 cggctggtaa gcatccacgt aaatcttgtc aatgacgggc gacataataa aaaaggtcaa
     8221 aaacaacgcc agtccgagta acacctgatt tggcggtgcc gagggcgtgc ccagcgcgtt
     8281 acgcaacaag ccaaaaacaa tgatgatacg cgtgaagctc gtcatcatca gtaaaatcgc
     8341 cggcagaaac gtcagcgagg tgatgaaaac cagcgtctgg acggataatg accagctttg
     8401 gcctccgccc gctaatggtt ggctgataag ccccggcagt tgcgcagcgg cggcgggact
     8461 aaaaagccac agacccgcca gagaaaggaa taacaaacgg cgcatcagga tctcccggaa
     8521 cgcttgagta agctcttcat catgttctgg aaatccgccg gtggggcaac gggtgcttcc
     8581 gtgtcattct ccgcgggcgg gagggtgtgc agcaggttga tctgcgaggc ggtcacgccc
     8641 agtaccaggc gcgcattttc gacctcgaca atcaccacgc gttcgcgcgg gccaagcgag
     8701 gcgctggctg acaccttcag tccccggacg ctatttcctt ttggcgcgaa tcccatacgc
     8761 ttaatcaccc aggccgccgc cagaatgagc gcaataatgc caattaatgc gccgctcacc
     8821 tgcatgagcg gcgatccggc tggcgcggtg ggctgagaaa ccgtggcctc tgtcttcatc
     8881 attaacgact caaacgacgc atacgctcgg atggcgtaat aatatcggtg atacgtacgc
     8941 cgtatttatc cgccacgacg accacttcac cctgggcaat caggtagcca ttaatcagga
     9001 tgtccagcgg ctcgcccgcc agcccgtcca gcgcgacgac cgacccctgc gtcagacgca
     9061 gcagttcttt aatggtcatt cgcgtgcggc ccagctctac ggtcagtttg accgggatat
     9121 ccataatcag atcgatatcc tgcatagcac cgctgacatc gccgccgcca agctgttgga
     9181 aaaccgcgtc ggcggcgctt ttattggtgg tcgctttttt ctcgtttaac gcgtcagccc
     9241 acagatcatc caatgcgcca gtattctcat cggacggatt attcatgtca ctcatttggg
     9301 ctgttcctca ttcagcgaat tcaaaattgg gttgatcaaa tgttctacgc gtagcgcata
     9361 ctgtccgttt acggtgccat attggctggt gagtaccgga acgccgtcca catgagcaat
     9421 aatgcggtcg ggtttttcaa tcggcagtac atcgccgggt ttcagcttca aaatctggga
     9481 aagacgtaac ggaatatcgg caaaattggc caccagctcc agttcagagt gctgaacctg
     9541 gcgcaccagg ttatcacgcc agttctgatc ttcatggcgc gagttttcca gcggcggatt
     9601 caccagcagc tcacgcagcg gctcgatcat gctaaatggc agacagatgt taaattcacc
     9661 ggtcagattg ccgatctcca catgaaacgg cgtattgacg acgatatcgt tcggcgaggt
     9721 ggtgatattg gtaaatttca cctgcatttc ggaacgcaca tactccactt ccagcggatt
     9781 aatggctttc catgcgtcgc tatagccttc cagcgccagt ttcagcatac ggttgatgac
     9841 ccgctgttcc gtatgggtaa actcgcggcc ctcgactttg gtcggaaaac gaccgtcgcc
     9901 gccgaacagg ttatcgacgg taataaacac cagactcggc gagaacacca ccagcccggt
     9961 gccgcgtagc ggcttcaggt ggatcaggtt caggttggtc ggtactggca ggttacgcgc
    10021 aaattcgtga tacggctgaa tacgtatggc gcccacggta atatccgggc tgcggcgcag
    10081 caggttaaat aatcccatcc ggaactggcg tgcgaaacgc tcgttaataa tctccagcgc
    10141 ctgcaagcgt tcacgcacga cgcgacgctg ggtattggga tcgtaagggc gaatatcgct
    10201 atcgcttgcg ataccgggag tgggttcgtc tttggtgtcg ctgtcgccgt tcaacagcgc
    10261 atcgatttca gcctgagaaa gaatactatc gcccatatcg ttaccgcaga ataaaagctg
    10321 tataaagcac gtcagtgacg acctgttttg gttgtccggc aacgagcggc gcggccagcg
    10381 tctctttaat ggcggcaatc agtttttgtt tgccagcttc tgttgagagc tcggcggcat
    10441 tctgacggga aaataacaac agcagacggc tgcgcacttc cggcagatat tcatttaatc
    10501 gtgcgcgcgt cgcttcgtct ttcagacgca gggtcacgcc gatatacaac acgcgatccg
    10561 catcgcccag attgacggta aacgtatcca gcacaaaaaa taccggcgcg ggcggcggag
    10621 ccggttccgc tttagcgttc gtggtcggtt gctgctgcat acgccagtag ctataaccgg
    10681 cagtcgcgca ggcggcgagg gtaatcaaca ccagcaaagg tatccaaatc gagcgtttgc
    10741 tctttttgtt aatcgcggag tcagtcatct gatacgggct tcctgtttcg gtactgctta
    10801 ttggctgatt atcccgtgtc ctgtccacga caaagcgtgg aaaagacgcg gataatcatg
    10861 ctacctctgg cgttaggcga agatatccac tgcgccattg ccgcgcgcgg cggcctgaag
    10921 cgaggccggc gccgctaacg ctatatcatc ttcagcgcca aacgcgtctg tgtgttgggc
    10981 gcgggcagac tgttgttgcg atgaagactg ctgctgtccg gcaaagcttt cgctactgat
    11041 actactttgt cccaactgaa tgccgctttc cgccaactg
//
LOCUS       DAGWFR010000133        11023 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.135, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000133 DAGWFR010000000
VERSION     DAGWFR010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 11023)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11023)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11023
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.135"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..485)
                     /locus_tag="MOX77_003439"
     CDS             complement(<1..485)
                     /locus_tag="MOX77_003439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000002042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCA3358876.1"
                     /translation="MANLPETPQWESGIYQIEVSDPVLGGPDGISNRQAKQLASRTSY
                     LKQKVEKSGTDLAAHIAAVDPHTQYATKASPTFTGTPTAPTPANGDNSKKLATTEFVA
                     KALAALAGSAPETLDTLKELADALGNDPNFATTVLNKLAEKLAKDQNGADIPEPALFV
                     K"
     gene            complement(488..1066)
                     /locus_tag="MOX77_003440"
     CDS             complement(488..1066)
                     /locus_tag="MOX77_003440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000852583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein I"
                     /protein_id="HCA3358877.1"
                     /translation="MAEVLQLPPPLEGDISLRTLGRLAGRLDNIDLSVLMVGLVDIVD
                     SSALPWLGEQFSLFGDGWELAESDDVRRMLIKSAIELHRYKGTPWSIREIIRRFGFGE
                     VDLIEGTGQIGYDGRHTYNGLFVHGDAQAWAVYRVILQQPITNDQAALLRQTLAAFAP
                     ARCHLASLEYQSVAIRYNSTTRYDGSYNHGSS"
     gene            complement(1059..2162)
                     /locus_tag="MOX77_003441"
     CDS             complement(1059..2162)
                     /locus_tag="MOX77_003441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016191672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
                     /protein_id="HCA3358878.1"
                     /translation="MALTEPDFIERDADKITAEMIAKYEADTGKTLYPAQAERLLIDL
                     WAYREMLVRVAVQEAAKQNLVAFSREPMIDYLGELVDVYRLAAQPATTTLQFSVDEAL
                     AIDVLIPAGTRVSASDSIIFATDTDVVLKAGLLLVNVTATCTEPGTAGNGWQPAQVSQ
                     LLDEIDNIDLLVTNLTASSGGSEQEDDDRLRERIRLAPESFTNAGSRGAYRFHAMGAH
                     PGIVDVAVLSPAPGTVELYPLLSTGLPDSSILTLVESFCSDEKVRPLTDTVRAKTPVQ
                     VDYTIEARITIYRDQDARLVKDNANSAIQNWVASRTATLGRDIVPSQIISVLSVSGVY
                     QVELVTPALRVVAENEWANCTAITLNMTGVSDG"
     gene            complement(2153..2500)
                     /locus_tag="MOX77_003442"
     CDS             complement(2153..2500)
                     /locus_tag="MOX77_003442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000859115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPW/gp25 family protein"
                     /protein_id="HCA3358879.1"
                     /translation="MKTTSVFWQPALQAPGEIVRGLDDIRQSIQIILRTPRGSDPHRP
                     EFGSNLHLYIDWPVGRAIPHVVRESVDAIRRWEPRCQLMSVKPAVDGEHLTLRVSWKG
                     SDGQPRTQELLWR"
     gene            complement(2557..3084)
                     /locus_tag="MOX77_003443"
     CDS             complement(2557..3084)
                     /locus_tag="MOX77_003443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006122455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HCA3358880.1"
                     /translation="MTGVTRQIGTVSAVDADRVQARVRLPECDNLRTNWLNVLQRNTQ
                     DNKDYWLPDVGEQVEVLLDANGEDGVILGAVYSDVDKPPFSDKNVRGTKYADGAEFSY
                     NRATHTLTVRGGIERIVVEVAADISLKGKNLDLTGVTTINGPATLNGDLEINGSAHAT
                     GNIFADGQNSNHHSH"
     gene            complement(3081..4235)
                     /locus_tag="MOX77_003444"
     CDS             complement(3081..4235)
                     /locus_tag="MOX77_003444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001545521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage late control D family protein"
                     /protein_id="HCA3358881.1"
                     /translation="MAEINSTAQATSALTSVSDVLTPVFTLWYLQKNITSDIAPYVTR
                     VVWSDNIKNESDTIEVELDDTDGRWLDKWYPGKGDTLTLKMGYQGEKLLSCGTFSIDE
                     IEVSSPASVVAIRGVATSVNSALRTKSSRGFENTTLAAVAGRIARKHRLKLVGSIESI
                     KIDRVTQYAETDVGFLRRLASEYGYAVKVVSDQLIFSHLATLRSQEPVRQLKPQGVAR
                     FSLRDTINRVYKSAKVKHQKSSSKKLIVYEADGGTRESDKKLKGGKVTSADSLKVNSR
                     VSDPDSARIKADSALARHNEYQQNGSLTLTGTPQLTAGNKIELVGFGQLSGPWLIITA
                     RHAFERNSGYTTELEVARGPVTRGKKQKTQKLTVYHPDGSTSTVIKEKKK"
     gene            complement(4223..4435)
                     /locus_tag="MOX77_003445"
     CDS             complement(4223..4435)
                     /locus_tag="MOX77_003445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000478222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail protein X"
                     /protein_id="HCA3358882.1"
                     /translation="MFLEHITRDGERWDSLTWQYYGDPLGYPRIIAANPHVAITPVLP
                     SGLLLLIPVIEAEDARTEEDIAPWLR"
     gene            complement(4435..5319)
                     /locus_tag="MOX77_003446"
     CDS             complement(4435..5319)
                     /locus_tag="MOX77_003446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001423226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCA3358883.1"
                     /translation="MFAVLGDIEFELITYWDGFEATFGVDYAEHARIEGKPGLQFVGD
                     RLDEIQISLVFHQHYCVPDVELARVRTAMKAHQALALVFGNGDYRGWFVITDVTATSE
                     QTDSTGNVLAVSATVSLREYTGDPKNPLQPPAIRRQVPGAGAVSGAVPSPSGVAQFVR
                     NGVNYAKQAQSVLQTTISAVRVAQKMKGNPVVALTRVPGLMSGLGNISGALGKSVPAF
                     NALSESMPDAISLARTASEAATYVQQAQSALSGVDKRNIAGALDTVSGQLNAAGTAFN
                     RMSPGLSAMAARILTRSV"
     gene            complement(5319..7784)
                     /locus_tag="MOX77_003447"
     CDS             complement(5319..7784)
                     /locus_tag="MOX77_003447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001716231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HCA3358884.1"
                     /translation="MASEFSVGVIIGGIVGSSFRSAVSGTRRALDSLGDTSRRLQERQ
                     NALTRATERYGQLGSSRMQHLNSELLRVSRTMEQIERQQRRLSAVSATGDALKANRLA
                     LYGQGAETYAIGRTLGAPVMASVKQYASFESQLRDISVTGDLDAKQERAIGQAIRQAS
                     LKVNQLQESLLGGVGQLVADGMAPERAATFAEMLGKTATATKADMTDLAKMTYAFSDA
                     LRITDAKELEQAFGIAATGAKLGSFELKDMAKALPGMAKAFAARGIYGKDAITQIVAS
                     LEVGKGSGSAEEAVTNMSNWLAAMGRGDTIQKYAKAGVDYQGSMQNYVAQGFSQYEAS
                     LMIANRFIDSKGKAFLQQWKAAGARGDQEGQQKLMESFGLAEVFTDIQTVNHLLSMRQ
                     GWDKYLSSKQEMNAPAAISTLDKDAAKQNDTLEGRWRRMQIGFNDSAISIGQSLRPAL
                     LQLGETFIPLMDSVGKWIAANPQLVSSTIKVVGALLAFRMATIGLKLGLNLLLSPFVS
                     VWKNAVLLRANWLRLTLALGEGGKLRWLVTGFGAVARGARTLGGVLSGGLVRGIMSAG
                     RAVLWIGRALLMNPIGLVITAVAAAAYLIYRNWGAVSSWFKQRWADIQEAFNGGIVGI
                     GKLLVNWSPAGLLYKAFAAALKYLGVDLPAKFTDFGGHLIDGLINGIRNKWASLKTSV
                     TGMGDSISDWFSEKLGIHSPSRVFMGFGDNIAQGAAIGLQRTTPLAALAGQRLAAEMT
                     PDVPRIPSPEIMAAGYSGRGATATGGGASGGIKVSFNPQFFLNGKETAAPAGLTGALN
                     MSLHELEKMLERLLAQKQRKEYS"
     gene            complement(7878..8015)
                     /locus_tag="MOX77_003448"
     CDS             complement(7878..8015)
                     /locus_tag="MOX77_003448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006122450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GpE family phage tail protein"
                     /protein_id="HCA3358885.1"
                     /translation="MQAQGLLARWFRFQPGEIDALDTDDLEMWLEQAEEQIKSEFGDN
                     Q"
     gene            complement(7960..8295)
                     /locus_tag="MOX77_003449"
     CDS             complement(7960..8295)
                     /locus_tag="MOX77_003449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000084214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly protein"
                     /protein_id="HCA3358886.1"
                     /translation="MSQTQSDTFTLSYPFTTAAGTRIEQIELKRLTVKDLKQVRKINK
                     DPADWDEPLIARSTGILPEDLDNMDLADYMELQKRFQKITGLGKSDKNTDAGAGPAGE
                     MVQVSTGGD"
     gene            complement(8393..8674)
                     /locus_tag="MOX77_003450"
     CDS             complement(8393..8674)
                     /locus_tag="MOX77_003450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000110114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358887.1"
                     /translation="MSVELTDKGGRCASLGMSNGTWFTLLDIPGVETLFNTRKTNDPI
                     DCTRSKARKLADLIEAWKPPDQWFSGTGKSEGKALLIAFLRNCKGFRTC"
     gene            complement(8677..9201)
                     /locus_tag="MOX77_003451"
     CDS             complement(8677..9201)
                     /locus_tag="MOX77_003451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major tail tube protein"
                     /protein_id="HCA3358888.1"
                     /translation="MMSKIEINRITNANIYLDGTNLLGRAEEVKLPDVSMIMQEHKAL
                     GMVGKVELPAGFDKLEGEIKWNSFYRDAMLSAANPYKSLALQCRSSVQRYSSQGLIDE
                     IPLVTFLTIMFKKNPLGTFKQHENAEFSSSFTCTYIRQVLDGEELLQLDYLANIFRVG
                     GVDQLTDYRINIGG"
     gene            complement(9198..10625)
                     /locus_tag="MOX77_003452"
     CDS             complement(9198..10625)
                     /locus_tag="MOX77_003452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001610519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath subtilisin-like
                     domain-containing protein"
                     /protein_id="HCA3358889.1"
                     /translation="MAANYLHGVETIEVENGARPVKTVKSAVIGLIGTAPMGDVNTLV
                     QCLSEKDAAAFGSQFTGFTIPQALDAIYDHGAGTVLVINVLDPSVHKIAVVSENVSFD
                     KATGRARLANPVVAQLVLKPDSNGQPYVEGQDYSLDAQTGVITNLGKSIAADATVKAS
                     YNYADPTKVTPADIIGTVNAAGNRTGMKLLNDSFNLFGYFAKILIAPVFCTQNSVSVE
                     LIAMAEKLGAVTYIDAPVGTTFAQALAGRGPEGTINFNTSSDRVRLCYPHVKVYDPVT
                     NTERLEPLSQRAAGLRAKVDLDKGYWWSSSNQEILGITGVERQLSAMIDDPQSEVNLL
                     NEQGITTVFSSYGSGLHLWGNRTAAWPTVTHMRNFENVRRTGDVINESIRYFSQQYID
                     MPITQALIDALTESVNAYGRKMTGDGAVLGFRCWFDPARNPETELAAGHLLLSYKYTP
                     PPPLERLTFETEITSEYLLTLKGGN"
     gene            complement(10615..10866)
                     /locus_tag="MOX77_003453"
     CDS             complement(10615..10866)
                     /locus_tag="MOX77_003453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001513985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358890.1"
                     /translation="MKEYRYSGPASGVTLSDGTEILLWPGKTVSLPEEHDYVKVLVAL
                     KHLTPVPEDTKPAVTPAVQSPKRRSSSDSEVKTEDSHGS"
     gene            complement(10866..>11023)
                     /locus_tag="MOX77_003454"
     CDS             complement(10866..>11023)
                     /locus_tag="MOX77_003454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016191683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358891.1"
                     /translation="RRIWLTREVFIGEVRGLWQYALDFATESVFIEDSDLPSGPLLTE
                     VNYEESE"
BASE COUNT         2379 a         3144 c         2892 g         2608 t
ORIGIN      
        1 tttttgacaa acagcgcagg ctcaggaata tctgcgccgt tctggtcttt agccagcttt
       61 tccgccagct tgttcagtac cgtagtcgca aagtttggat cattaccgag agcgtcagcc
      121 agctctttaa gcgtatccag tgtctcaggg gcgctgcctg caagtgccgc aagtgctttg
      181 gccacaaact ccgtcgtcgc cagctttttg ctgttatcac catttgcagg tgtaggtgct
      241 gttggtgtgc cggtgaatgt cggactggct ttcgtcgcgt actgggtatg cgggtcaact
      301 gccgcgatat gtgcagccag gtctgttccg cttttttcga ccttctgttt gaggtatgac
      361 gttcggctgg ccagttgttt agcctggcgg ttagaaattc cgtcaggtcc gcccagaacg
      421 gggtcagaga cctcaatctg gtagatgccg ctttcccact gcggggtttc gggtagattt
      481 gccataatta actgctcccg tggttgtaac taccgtcata acgggtagta ctgttgtatc
      541 gaatggcgac agactgatat tccagacttg ccagatgaca gcgagccgga gcaaaggcag
      601 caagcgtctg acgtaacagc gccgcctgat cgttagtgat gggttgttga aggatgacgc
      661 gatagactgc ccaggcttgt gcatcaccat ggacgaaaag cccgttgtac gtgtgtctgc
      721 cgtcatagcc aatctgcccc gtaccttcaa tcagatccac ttcgccgaag ccaaaacggc
      781 ggataatttc ccggattgac cacggtgttc ctttatagcg gtgtagctcg atagcggatt
      841 tgataagcat gcggcgtaca tcgtccgatt ccgccagttc ccagccatcg ccgaacagcg
      901 agaactgctc gccaagccat ggcagcgcgg aactgtcgac aatatcgacg agaccgacca
      961 tcagtacgct caggtcgatg ttatccagcc gtccggccag tcttcccagc gttctgagac
     1021 tgatatcacc ctcaagcggt ggcgggagtt gtagcacctc agccatcgga caccccggtc
     1081 atgttaagag tgatcgctgt acagtttgcc cattcgtttt ctgccaccac cctcagtgcc
     1141 ggtgtcacca gttcgacctg gtacaccccg gaaacggaca acacgctgat aatctggctg
     1201 ggaacaatat cgcgccccag cgtggcggta cgggatgcca cccagttctg tatggcgctg
     1261 ttagcgttgt cctttaccaa ccttgcatcc tgatcacgat agatcgtaat cctggcttca
     1321 atggtgtaat ccacctgaac aggtgtttta gcccgcacgg tatcagtgag tggtctgact
     1381 ttttcgtcag aacagaaact ctctaccaga gtgaggatac tgctgtccgg cagaccagtg
     1441 ctgagcagcg gatacagctc gacagtgccg ggagcgggag aaagaacagc aacgtcgaca
     1501 atgccgggat gcgcccccat agcatgaaaa cggtatgcac cacggcttcc ggcattggtg
     1561 aatgactccg gggccagcct gatacgctcc cggagccggt catcgtcttc ctgctctgaa
     1621 ccgccagagc tggccgtcag attggtcacc agcaggtcaa tgttatcaat ctcatcgagt
     1681 aactgactga cctgcgccgg ttgccagccg ttgccagcgg tacccggctc ggtacaggtg
     1741 gccgtgacat tgaccagcag caatccggcc ttcagcacca catctgtatc ggtggcaaaa
     1801 ataatactgt cggaagcgct gacgcgggtg cctgccggga tcagcacatc aatggccagt
     1861 gcctcatcca cagagaactg aagtgtggtg gtggcaggct gcgcagcaag gcggtatacg
     1921 tcgaccagtt caccgaggta atcaatcatc ggctcacggg aaaaagcgac cagattctgc
     1981 ttcgccgcct cctgtactgc caccctgacc agcatttcgc gataggccca caggtcaatc
     2041 agcagacgtt cagcctgtgc cgggtacagc gtttttccgg tatccgcttc atacttcgca
     2101 atcatttctg ccgtgatttt atcggcatcg cgttcaataa aatcgggttc tgtcagcgcc
     2161 atagcagttc ctgagtacgg ggttgtccgt ctgagccttt ccagctcacc cggagcgtaa
     2221 gatgttcgcc gtcgacggcg ggtttaaccg acataagctg gcagcggggt tcccagcgcc
     2281 tgatggcatc gacggattcg cgaaccacat gcggaatggc ccggccgaca ggccagtcga
     2341 tataaaggtg cagattgctg ccgaactccg ggcgatgcgg gtcgctgccg cggggagtcc
     2401 gcaggatgat ctggatggac tgccggatat catccagccc ccggacgatt tcgccgggag
     2461 cctgcagagc tggttgccag aatactgagg tcgttttcat ggaggcagta ttgcccccgg
     2521 gaagtaagcg ccgatattaa aggcgtttaa gaaggttcaa tgggaatggt gattagagtt
     2581 ctgaccatca gcaaatatgt tacccgttgc atgggcgctt ccgttgattt ccagatcacc
     2641 attgagtgtc gcggggccgt tgatcgtggt aactcccgtg aggtcgaggt ttttcccttt
     2701 gagagagata tcagcggcaa cctccaccac gatacgctca atacctcctc tgaccgtcag
     2761 cgtatgggtc gcgcggttat aactgaactc cgcgccatca gcgtatttcg taccccggac
     2821 gtttttatca ctgaacggcg gtttatcgac gtctgagtac accgcgccca gaataacacc
     2881 atcctcgccg ttggcatcga gcagcacctc aacctgctcc cccacgtcag ggagccagta
     2941 atccttgtta tcctgggtat tgcgctgtag cacgttaagc cagtttgtgc gcagattatc
     3001 gcattcaggc agacgaacgc gggcctgaac cctgtcggca tcaacggcac tgaccgtacc
     3061 gatctgacgg gtgacaccag tcattttttc ttctccttaa tcaccgtcga tgtactgcca
     3121 tccgggtgat aaaccgtgag tttctgagtt ttttgttttt tccctcttgt gactggcccc
     3181 cgtgccactt ccagctctgt ggtgtagccg ctgttacgct caaacgcatg gcgggcagtg
     3241 attatcagcc atggaccgga taactgtcca aagcccacca gttcaatttt gttgcctgct
     3301 gtcagttgag gcgttcccgt cagcgtcagg gagccgttct gctggtattc gttatgtctg
     3361 gccagtgctg aatccgcttt aatccgggcg ctgtccgggt cgctgacgcg gctgttaact
     3421 ttaagtgagt cagcgctggt aaccttaccg cctttgagct ttttgtcgct ttcacgggta
     3481 ccaccatcag cttcgtagac gatcagtttt ttactgctgc ttttctggtg ttttaccttt
     3541 gcagatttat agacccggtt gatggtgtca cgcagggaaa agcgggccac accctgcggt
     3601 tttaactgcc tgaccggctc ctgactgcgc agtgtggcca gatgagaaaa aatcaactgg
     3661 tcactgacca ctttcactgc ataaccatac tcgctggcca gccggcgcag aaaacccacg
     3721 tcggtttcag catactgggt cacccggtcg attttgatgg actcaatgct gcccaccagt
     3781 ttcagtcggt gctttctggc aatccgcccc gcaacagctg ccagcgtggt gttctcaaaa
     3841 ccacggctgg atttagtccg cagagcactg ttaaccgagg tggccacccc acggatagcg
     3901 acaacggacg cgggcgaact cacttcgatc tcgtctattg agaatgtacc gcaggacagc
     3961 agtttctcgc cctgataacc cattttcagc gtcagcgtgt cacccttgcc cggataccac
     4021 ttatccagcc agcgaccatc ggtgtcatcc agctccacct caatggtatc ggactcattt
     4081 ttgatgttat cgctccagac cacacgggtg acataaggcg cgatatcaga ggtgatgttt
     4141 ttctgcagat accacagagt gaataccggc gtcagcacat cgctgacgct ggttaacgct
     4201 gatgtggctt gcgcagtact gtttatctca gccatggggc aatatcctct tctgtacggg
     4261 catcttcagc ctcaataacc gggatcagta acaacaaccc ggagggcagc accggcgtaa
     4321 tggccacgtg cggattggct gcaataatcc ggggatagcc cagcgggtca ccgtagtact
     4381 gccatgtcag cgaatcccag cgctctccgt cacgggtaat atgttcaaga aacatcacac
     4441 actcctcgtc agtattctgg cggccattgc acttaatccc ggagacatgc ggttgaatgc
     4501 tgtgccggcg gcgttaagct gcccggaaac ggtatccaga gcacctgcaa tatttctttt
     4561 gtccacacca ctcagcgccg actgcgcctg ctgtacatac gtggctgcct cactggctgt
     4621 tctggccaga ctgatggcat cgggcatgga ttcagagagt gcattaaacg ccggaacact
     4681 tttccccaga gctccggata tattacccag tccgctcatc agtcccggca cacgggtcag
     4741 cgcgacaacg gggttaccct tcattttctg cgccacccga acggcactga tagtggtctg
     4801 gagtacagac tgcgcctgtt tcgcatagtt gacgccgtta cggacgaact gcgccacccc
     4861 ggaaggcgat ggaacagcac ccgatacagc tccggcaccg ggaacctgcc tgcgtattgc
     4921 cggcggttgc agaggatttt tcgggtcacc ggtgtattcc cggagagaca cggtggcact
     4981 gacagccagc acgttaccgg tgctgtctgt ctgctcgctg gttgcggtca catcggtaat
     5041 cacgaaccag ccgcgatagt caccgttgcc gaagaccagc gccagtgcct gatgggcctt
     5101 catggctgtt cgcactctcg ccagctccac gtcgggcaca caataatgct gatggaagac
     5161 taggcttatc tggatttcgt ccagcctgtc gccgacaaac tgcaggccgg gtttaccctc
     5221 gatgcgggca tgctccgcat aatcgacgcc gaacgtggcc tcgaagccgt cccagtaggt
     5281 aatcagttca aactcaatat cacccagtac ggcaaacatc agctgtactc cttacgttgt
     5341 ttctgagcca gcagacgctc cagcattttt tccagctcat gcaggctcat attcagggca
     5401 ccagtcagcc cggcaggcgc tgcggtttcc ttaccattga ggaaaaactg aggattaaag
     5461 ctgaccttga taccgccaga cgctccaccg ccagttgcag ttgcgccacg gcctgaatat
     5521 ccggcagcca tgatttccgg cgacgggata cggggaacat ccggtgtcat ttcagcggcc
     5581 aggcgctgcc cggccagtgc agcaagcgga gtggtccgtt gcaggccaat ggcggcaccc
     5641 tgcgcgatat tgtcaccaaa gcccataaac acgcgactcg gtgaatggat gcccagcttt
     5701 tcgctgaacc agtcactgat gctgtcaccc attccggtta cgctggtttt gagtgacgcc
     5761 catttgtttc tgatgccatt tatcaacccg tcaataagat gaccaccgaa gtcggtgaat
     5821 ttcgccggca gatcaacgcc gagatatttc agcgcagccg caaaggcttt ataaagcaga
     5881 ccagccggag accagttaac cagcagttta ccaattccca cgatgccgcc gttaaaggct
     5941 tcctgaatgt cagcccagcg ctgtttaaac cagctactga ctgcgcccca gttgcggtag
     6001 ataaggtaag ctgctgccgc gacggcggtg ataacgagac cgatgggatt catcagcagc
     6061 gcccggccaa tccagagaac ggcacgcccg gcgctcataa ttccgcgaac cagcccccct
     6121 gagagcacac cacccagtgt tctggctcct ctggcgacag caccaaagcc tgtcaccagc
     6181 cagcggagtt taccgccttc ccccagtgcg agcgtcagac gaagccagtt ggcccgaagt
     6241 aaaacagcat ttttccagac gcttacaaag ggggaaagaa ggagattcag cccaagcttg
     6301 agaccgatag tggccatcct gaaagcgagt aatgcgccca caacctttat ggtgctgctg
     6361 acgagctgcg gatttgccgc tatccatttg ccaacactgt ccattaaagg aataaatgtt
     6421 tcacccaact ggagcaaagc cggacgcaag gattgcccga tgctgatagc agaatcatta
     6481 aagccgatct gcattctgcg ccagcgacct tcaagcgtat cattctgctt tgcagcatcc
     6541 ttatccaggg tagaaattgc agccggagca ttcatttcct gcttactgga aaggtattta
     6601 tcccagccct gtcgcattga cagtaaatgg ttgacagtct gaatatcggt aaagacctca
     6661 gccagaccaa atgactccat gagtttctgc tgaccttcct gatcgcctct tgctcctgca
     6721 gctttccatt gctgcaagaa cgctttgcct ttactgtcga taaaacggtt ggcaatcatc
     6781 agtgaagctt cgtactgcga aaaaccctga gcgacgtaat tctgcattga cccctggtaa
     6841 tccaccccgg ctttagcata tttctggatg gtatctccgc ggcccattgc tgccagccag
     6901 ttggacatat tggtgaccgc ttcctctgca gagccactac ctttaccgac ctccagactg
     6961 gcaacaatct gggtaatcgc atcttttcca taaataccac gagcagcgaa ggctttagcc
     7021 ataccgggta atgcttttgc catatccttc agctcaaatg acccaagttt ggctcctgtt
     7081 gccgcaatac caaacgcctg ttcaagttct ttcgcatcag tgattctgag tgcatcgctg
     7141 aaggcataag tcattttggc aaggtcggtc atatcggctt tggttgctgt agcggtcttt
     7201 ccaagcatct ctgcaaacgt tgctgcccgt tcgggggcca taccatcagc aactaattgt
     7261 ccgactcccc ctaacagaga ctcctgcagt tggttaacct tcagcgaggc ttgtctgata
     7321 gcctggccaa ttgcacgttc ctgttttgca tccaggtctc ctgtgacact gatatcccgc
     7381 aactgtgatt caaacgaggc atattgttta accgaggcca tgaccggtgc gcccagcgtt
     7441 ctgccaatag cataggtttc tgcaccctga ccatagagcg ccaggcggtt agccttcaac
     7501 gcatcaccgg tggctgatac tgctgacaga cggcgctgct gacgttcaat ttgctccatg
     7561 gtgcggctta cccgcagcaa ctcgctgttg agatgctgca tccgggaaga acccagttga
     7621 ccataacgtt ctgttgcccg ggttaaggca ttctggcgtt cctgcagacg gcgggaggta
     7681 tcaccaaggg aatcaagggc gcgtcgggtg ccactgacgg ctgagcggaa gctgctcccg
     7741 acaatgccgc caataatgac gccgactgaa aattcactgg ccacggtggc tatcctctga
     7801 aagcaaaaaa aacggaaggg aagtgtctga aacccatgca gaacagccgc gactggcggc
     7861 tgttaagtga tacgttgtta ctgattgtcg ccgaactcgc ttttgatttg ctcttcagcc
     7921 tgctccagcc acatctccag atcgtcagta tcgagggcat caatctcccc cggttgaaac
     7981 ctgaaccatc tcgccagcag gccctgcgcc tgcatcagtg tttttgtcgc tcttgcccag
     8041 cccagtgatt ttctgaaatc gtttctgcag ctccatatag tcggcaagat ccatgttatc
     8101 gaggtcttcc gggaggatac cggtgctacg ggcaatcagt ggttcgtccc agtctgccgg
     8161 gtctttgttg attttgcgca cctgcttcag gtcttttact gtcaggcgtt tcagttcaat
     8221 ctgttcaatt ctggtacctg cagcagtggt gaaaggataa gacagcgtaa aagtatcgga
     8281 ctgggtctgt gacatgatca tactcctttg taaattcaga gcagtatgtc tggcggtgga
     8341 cgtgacggat attaaagggg attaagaaga aggggccgga gcccctgtga tgtcagcaag
     8401 tgcgaaaacc cttgcagtta cgcaggaaag cgatgagaag cgcctttccc tcagatttgc
     8461 cggtgccgga gaaccactgg tcgggcggct tccatgcttc aatcaaatcg gccagtttgc
     8521 gggcctttga acgtgtgcag tcaatcgggt cattggtttt acgggtatta aagagggtct
     8581 ccacccccgg aatatcaagg agggtaaacc acgtaccatt tgacatgccc agtgacgcac
     8641 atcgccctcc tttgtcagtc agttcaacac tcaccgtcag cccccgatat tgattcgata
     8701 gtcagtcagt tgatcaacgc caccgacgcg gaagatgttg gccagatagt ccagttgcag
     8761 caactcttca ccatccagta cctgtctgat atacgtgcag gtgaagctac tggagaactc
     8821 ggcgttctcg tgctgtttga acgtccccag cgggttcttc ttgaacataa ttgtcaggaa
     8881 ggtgaccagc gggatttcgt cgatcagccc ctgcgagctg tagcgctgga cgctggagcg
     8941 acactgcagc gccagcgact tgtacgggtt cgcggcagac aacatcgcat cgcggtaaaa
     9001 gctgttccat ttgatttcgc cttccagttt gtcaaaacca gccgggagtt ccaccttacc
     9061 caccatcccc agtgccttgt gctcctgcat aatcatggag acatcgggga gtttaacttc
     9121 ctcagcccgt cccagcaggt tagtaccatc cagatagatg ttggcattcg tgattcggtt
     9181 tatctcaatc tttgacatca gttgccccct ttcagggtta acaggtattc cgaggtgatt
     9241 tcagtctcaa acgtcagtcg ctccagcggc ggtggtggcg tatatttgta gctcagcaac
     9301 aggtgcccgg cggccagctc cgtctccgga ttgcgggccg gatcaaacca gcaacggaag
     9361 cccagtaccg caccatcacc agtcattttg cgaccgtagg cgttgaccga ctccgtcagt
     9421 gcatcaatca gcgcctgagt aatcggcatg tcgatgtact gctggctgaa gtaacgaatg
     9481 gactcgttga tcacatcacc ggtgcggcga acgttctcaa agttacgcat atgggtgacc
     9541 gttggccatg ctgccgtccg gttaccccac agatgaaggc cgctgccgta actgctgaat
     9601 accgtggtga tcccctgttc gttaagcagg ttcacctcgc tctgcggatc gtcaatcatt
     9661 gccgacagct ggcgctccac gccggtgatc cccagaattt cctgattgga ggatgaccac
     9721 cagtaccctt tgtccaggtc gactttggca cgcaggcccg ccgcacgctg gctcagtggc
     9781 tccagacgct ccgtgttcgt caccgggtca tataccttca catgcgggta gcacaggcgg
     9841 acacggtcag agctggtatt aaagttaatg gtgccttccg ggccacgtcc cgccagagcc
     9901 tgcgcaaaag tggtaccaac cggcgcatca atataggtta ctgctcccag tttctcagcc
     9961 atggcgataa gctcaaccga gacgctgttc tgggtgcaga ataccggagc aatcaggatt
    10021 ttggcgaagt agccaaacag gttaaaactg tcgttaagca gcttcatgcc ggtacggttg
    10081 cctgcagcgt taacggtacc gatgatatca gccggggtga ctttggtcgg atcagcatag
    10141 ttatagctgg ccttcaccgt tgcatctgca gcaatgcttt tacccaggtt agtaatcacc
    10201 ccggtctgtg catcaagcga gtagtcctga ccttcaacat aaggctgacc gttgctgtcc
    10261 ggtttcagta ccagctgcgc gaccaccgga ttagccagcc gggctctgcc tgtcgccttg
    10321 tcgaacgaca cattctcact gaccacagcg attttatgca cagacggatc gagtacgtta
    10381 atgaccagaa cggtgcctgc accatggtca taaatcgcat ccagcgcctg cggaatggta
    10441 aagccggtga actggctgcc aaatgccgca gcgtctttct cagacaggca ctgtaccagc
    10501 gtattgacat cccccatcgg ggcggtacca atcaggccaa taacggcaga tttcaccgtt
    10561 ttaaccgggc gggctccgtt ttccacctca atggtttcga cgccatgcag atagttagct
    10621 gccatgggag tcctccgttt tcacttcgct gtcactgctg cttctgcgct ttggtgactg
    10681 cacagccggt gtgacggcgg gtttagtatc ttctggtacc ggcgtcagat gcttcagcgc
    10741 caccagtacc ttcacgtagt catgctcctc cggcagggaa accgtcttcc ccggccagag
    10801 caggatttcg gttccgtccg acagcgtgac gccgctggcc gggccggaat agcggtattc
    10861 tttcatcact cgctttcctc atagttcact tcggttaaca gcgggccgga cggtaaatcg
    10921 ctgtcttcga taaagacgct ttcagtcgcg aagtcgaggg cgtattgcca cagccccctg
    10981 acttcaccga taaacacctc gcgggtcagc cagatacggc ggc
//
LOCUS       DAGWFR010000134        11010 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.136, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000134 DAGWFR010000000
VERSION     DAGWFR010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 11010)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11010)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11010
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.136"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..669
                     /locus_tag="MOX77_003455"
     CDS             <1..669
                     /locus_tag="MOX77_003455"
                     /EC_number="1.1.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate dehydrogenase"
                     /protein_id="HCA3358892.1"
                     /translation="PNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLE
                     DYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHG
                     GRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAYLY
                     ALATAGKTGVANLLDLIEKEMKVAMTLTGAKSISEISGDSLVQELGKSLPAALAPMSK
                     GDAA"
     gene            734..1207
                     /gene="trmL"
                     /locus_tag="MOX77_003456"
     CDS             734..1207
                     /gene="trmL"
                     /locus_tag="MOX77_003456"
                     /EC_number="2.1.1.-"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000932331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (uridine(34)/cytosine(34)/5-
                     carboxymethylaminomethyluridine(34)-2'-O)-
                     methyltransferase TrmL"
                     /protein_id="HCA3358893.1"
                     /translation="MLNIVLFEPEIPPNTGNIIRLCANTGFRLHIIEPMGFAWDDKRL
                     RRAGLDYHEFAAVQRHHDYAAFVAAENPQRLFALTTKGTPAHSAVSYQDGDYLMFGPE
                     TRGLPASILDALPKEQKIRIPMMPDSRSMNLSNAVSVVVYEAWRQLGYPGAVLRS"
     gene            complement(1275..2279)
                     /locus_tag="MOX77_003457"
     CDS             complement(1275..2279)
                     /locus_tag="MOX77_003457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HCA3358894.1"
                     /translation="MKRTKSPRAPTLEDVARSAGLSPMTVSRALNSPQLVRPKTVEKV
                     MQAVRVTGYIPNALAGGLASRRSKLIAVVVPQINNNMFVDTIQSLSDELARRGYHILL
                     CVAGYTEQTEAELVATLLSRRPDGVVLTGIHHTIELKKVILNAAIPVVEIWDLTPTPL
                     DMLVGFSHEKVGQATGEYLLSKGYRRPGLLWTADRRAAQRKQGLCSVLQRHAIHAVPQ
                     VDVPLPASLSLGRSGLSQLFDEGTFDVIVCSSDTLAQGAMMEAESRGLRIPHDLAVIG
                     FGDLDFAASNRPSITTVSVDRRAIGQRAATLLADRIEQKPCAEAIVDIGFHLIERESA
                     "
     gene            2598..3794
                     /locus_tag="MOX77_003458"
     CDS             2598..3794
                     /locus_tag="MOX77_003458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-talarate/galactarate dehydratase"
                     /protein_id="HCA3358895.1"
                     /translation="MALSANSDAVTYAKAANTRTAAETGDRIEWVKLSLAFLPLATPV
                     SDAKVLTGRQKPLTEVAIIIAEIRSRDGFEGVGFSYSKRAGGQSIYAHAKEIADNLLG
                     EDPNDIDKIYTKLLWAGASVGRSGMAVQAISPIDIALWDMKAKRAGLPLAKLLGAHRD
                     SVQCYNTSGGFLHTPLDQVLKNVVISRENGIGGIKLKVGQPNCAEDIRRLTAVREALG
                     DEFPLMVDANQQWDRETAIRMGRKMEQFNLIWIEEPLDAYDIEGHAQLAAALDTPIAT
                     GEMLTSFREHEQLILGNASDFVQPDAPRVGGISPFLKIMDLAAKHGRKLAPHFAMEVH
                     LHLSAAYPLEPWLEHFEWLNPLFNEQLELRDGRMWISDRHGLGFTLSEQARRWTQLTC
                     EFGKRP"
     gene            3868..5178
                     /locus_tag="MOX77_003459"
                     /pseudo
     CDS             3868..5178
                     /locus_tag="MOX77_003459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462598.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            complement(5261..6082)
                     /gene="cysE"
                     /locus_tag="MOX77_003460"
     CDS             complement(5261..6082)
                     /gene="cysE"
                     /locus_tag="MOX77_003460"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001112113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HCA3358896.1"
                     /translation="MPCEELEIVWKNIKAEARALADCEPMLASFYHATLLKHENLGSA
                     LSYMLANKLASPIMPAIAIREVVEEAYAADPEMIASAACDIQAVRTRDPAVDKYSTPL
                     LYLKGFHALQAYRIGHWLWNKGRRALAIFLQNQVSVSFQVDIHPAAKIGRGIMLDHAT
                     GIVVGETAVIEDDVSILQSVTLGGTGKTSGDRHPKIREGVMIGAGAKILGNIEVGRGA
                     KIGAGSVVLQPVPPHTTAAGVPARIVGKPGSDKPSMDMDQHFNGLHHTFEYGDGI"
     gene            complement(6160..7179)
                     /gene="gpsA"
                     /locus_tag="MOX77_003461"
     CDS             complement(6160..7179)
                     /gene="gpsA"
                     /locus_tag="MOX77_003461"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HCA3358897.1"
                     /translation="MNQSNASMTVIGAGSYGTALAITLARNGHQVVLWGHDPKHIATL
                     EHDRCNVAFLPDVPFPDTLHLESDLATALAASRNILVVVPSHVFSDVLRQIKPLMRPD
                     ARLVWATKGLEAETGRLLQDVAREALGDQIPLAVISGPTFAKELAAGLPTAISLASTD
                     ETFADDLQQLLHCGKSFRVYINADFIGVQLGGAVKNVIAIGAGMSDGIGFGANARTAL
                     ITRGLTEMSRLGAALGADPATFMGMAGLGDLVLTCTDNQSRNRRFGMMLGQGMDVKGA
                     QDKIGQVVEGYRNTKEVRELAHRFGVEMPITEEIYQVLYCGKNAREAALTLLGRARKE
                     ELSRH"
     gene            complement(7179..7646)
                     /gene="secB"
                     /locus_tag="MOX77_003462"
     CDS             complement(7179..7646)
                     /gene="secB"
                     /locus_tag="MOX77_003462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015369180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-export chaperone SecB"
                     /protein_id="HCA3358898.1"
                     /translation="MSEQNNTEMAFQIQRIYTKDVSFEAPNAPHVFQKDWQPEVKLDL
                     DTASSQLADDVYEVVLRVTVTASLGEETAFLCEVQQAGIFSISGIEGTQMAHCLGAYC
                     PNILFPYARECITSLVSRGTFPQLNLAPVNFDALFMNYLQQQAGEGTEEHQDA"
     gene            complement(7690..7941)
                     /gene="grxC"
                     /locus_tag="MOX77_003463"
     CDS             complement(7690..7941)
                     /gene="grxC"
                     /locus_tag="MOX77_003463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 3"
                     /protein_id="HCA3358899.1"
                     /translation="MANIEIYTKATCPFCHRAKALLNSKGVSFQEIAIDGDAVKREEM
                     IKRSGRTTVPQIFIDAQHIGGCDDLYALDARGGLDPLLR"
     gene            complement(8027..8458)
                     /locus_tag="MOX77_003464"
     CDS             complement(8027..8458)
                     /locus_tag="MOX77_003464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HCA3358900.1"
                     /translation="MQEIMQFVGRHPILSIAWIALLVAVLFTTFKGLTSKVKVITRGE
                     ATRLINKEDAVVVDLRQRDDFRKGHIAGATNLLPSEIKANNVGELEKHKDKPIIVVDG
                     SGMQCQESANALTKAGFEKVFVLKEGVAGWSGENLPLVRGK"
     gene            8706..10250
                     /gene="gpmM"
                     /locus_tag="MOX77_003465"
                     /gene_synonym="pgmI"
     CDS             8706..10250
                     /gene="gpmM"
                     /locus_tag="MOX77_003465"
                     /gene_synonym="pgmI"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HCA3358901.1"
                     /translation="MSVSKKPMVLVILDGYGYREEQQDNAILNAKTPVMDALWAKRPH
                     TLIDASGLEVGLPDRQMGNSEVGHVNLGAGRIVYQDLTRLDVEIKERTFFANPVLTNA
                     VDQAKNAGKAVHIMGLLSAGGVHSHEDHIMAMVELAAERGAEKIYLHAFLDGRDTPPR
                     SAEASLKKFEDKFAALGKGRVASIVGRYYAMDRDNRWDRVEKAYDLMTLAQGEFQADT
                     AVAGLQAAYARDENDEFVKATVIRAEGQADAAMEDGDTLIFMNFRADRAREITRAFVN
                     ADFDGFARKKVVNLNFVMLTEYAADIKTAVAYPPASLANTFGEWMAKNDKTQLRISET
                     EKYAHVTFFFNGGVEEPFAGEERILINSPKVATYDLQPEMSSAELTEKLVAAIESGKY
                     DTIICNYPNGDMVGHTGVMEAAIKAVEALDNCIEQVTKAVESVGGQLLITADHGNAEQ
                     MRDPATGQEHTAHTNLPVPLIYVGEKNVKAVEGGKLSDIAPTMLSLMGMEIPQEMTGK
                     PLFIVE"
     gene            10284..>11010
                     /locus_tag="MOX77_003466"
     CDS             10284..>11010
                     /locus_tag="MOX77_003466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418070.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein hydrolase activator EnvC"
                     /protein_id="HCA3358902.1"
                     /translation="MQQAVKPRTFSVRPLFYASVLSAGVLLCAFSAHADDRDQLKSIQ
                     ADIAAKERDVRQQQQQRASLLAQLKTQEEAISAAARKLRETQSTLDQLNAQIDEMNAS
                     IAKLEQQKASQERNLAAQLDAAFRQGEHTGIQLILSGEESQRGQRLQAYFGYLNQARQ
                     ETIAELKQTREQVATQKAELEEKQSQQQTLLYEQRAQQAKLEQARNERKKTLAGLESS
                     IQQGQQQLSELRANESRLRNSIAR"
BASE COUNT         2574 a         2986 c         2901 g         2549 t
ORIGIN      
        1 ccaaacgcgg ccatgcgccg ttactggcag gcggtgatgc accctaaatg ggcgtgggat
       61 gtcggcctga acggtcgccc gcatgattta ggcaatattt ccgcctatct gggtaaaccg
      121 accggccttg aggactatat cggctggctg gcaaataact tcgatccgtc catctcctgg
      181 aaagatctgg agtggatacg cgaattctgg gacggcccaa tggtgatcaa agggatcctc
      241 gatccagaag atgcccgcga tgcggtacgt ttcggcgctg acggtatcgt ggtgtcgaat
      301 cacggcggcc gccagctcga tggcgtgctc tcttccgccc gcgccctgcc cgccattgcc
      361 gatgcggtga aaggcgatat cgccattctg gcggatagcg ggattcgtaa cgggctggat
      421 gtcgtgcgta tgattgcgct gggggccgat accgtactgc tgggtcgggc ctatctctac
      481 gcgctggcga cggcaggaaa aactggcgtc gctaacctac tggacctgat cgagaaagag
      541 atgaaagtcg ccatgaccct gaccggcgcg aaatccatta gcgaaatcag tggcgattca
      601 ctggtgcagg aactggggaa aagtttgccc gccgcgctgg cgccaatgag caaaggcgat
      661 gccgcctgaa cgtctggcgc gtgagagccc ggtaaatttc tgctattctg ccccccgcat
      721 ttaagggggc atcatgctta acatcgtact cttcgaacca gaaatcccgc cgaataccgg
      781 caacatcatt cgtctttgcg ccaataccgg ctttcgtctg cacatcatcg aaccgatggg
      841 gtttgcctgg gatgataagc gcttacgccg cgcagggttg gactatcacg aattcgccgc
      901 ggttcagcgc catcacgatt atgccgcctt tgtcgccgcc gaaaatccac agcgcctgtt
      961 tgcgttgacg acaaagggca cgcccgccca tagcgccgta agctatcagg atggcgatta
     1021 tttgatgttt ggcccggaaa cgcgcggcct gcccgccagc attctcgatg cgttgcctaa
     1081 agagcagaag attcgcattc cgatgatgcc ggatagccgt agcatgaacc tgtcgaatgc
     1141 ggtgtcggtg gtggtgtatg aagcgtggcg ccagttagga taccccggcg cggtattgcg
     1201 gtcgtaatat attcaatgcc ggatggcggc taacgcctga tccggcctgg ccgatcccga
     1261 tggcatgttc ccgtttatgc ggactctcgc tcaatcaaat gaaagccaat atccacaata
     1321 gcttctgcgc acggtttctg ttcaatacga tcggccaaca gcgtagcggc gcgctgacca
     1381 atggcgcgtc tgtcaacgct tacggtagta attgacggtc gattgctggc ggcaaaatca
     1441 aggtcgccaa aaccaataac cgctaaatca tgcgggatgc gcaaaccacg gctttccgcc
     1501 tccatcatcg ccccctgtgc cagggtatca gaactgcaaa caatgacatc aaacgtccct
     1561 tcgtcaaaaa gctggcttaa accgctacgc cccagcgaaa gcgatgccgg aagggggaca
     1621 tccacctgcg gtacggcatg aatagcgtgg cgttgaagaa cactacataa cccctgctta
     1681 cgttgcgcgg ctcggcgatc ggcggtccac aacaagccgg gacgacgata gcccttactc
     1741 agaagatact cccccgtcgc ctgcccgact ttttcatggg aaaaaccgac cagcatatca
     1801 agcggcgtgg gcgttaagtc ccaaatttcc accaccggaa tagccgcgtt caggatgacc
     1861 tttttcagtt ctatcgtgtg atggatcccg gtaagcacca cgccatcggg gcggcgggaa
     1921 agcagtgtcg ccaccaactc cgcttccgtt tgttcggtat atcccgccac gcacagcaat
     1981 atgtgatatc cgcgtcgggc cagttcatcg ctcagtgact ggatggtatc gacaaacatg
     2041 ttgttgttaa tttgcggcac gacgacagcg attaatttac tccgtcgcga cgccagacca
     2101 ccggctaacg cgttgggtat gtagcctgtg acgcgaaccg cctgcatgac tttctcaacc
     2161 gttttggggc gaaccagttg tggcgaattc aatgcccggc tgactgtcat cggagacagc
     2221 ccggcgctac gtgctacatc ttccagcgtc ggcgcacgag gtgatttggt tctcttcacg
     2281 tctgatgccc ctgcaaagat tggctgattt atccgcgcat tattcatcat gcctgcggct
     2341 attgccagct tcgcatcagg aaaggccgta aatacagtag cttatcaagc tcagtcatta
     2401 caaaatgata gcgacatcat tttgtattat gcatttcccc agatattttt ggatcgtgat
     2461 ccattttgca ataaatcctg ctttttatac gacatatgtg atcaaatgtt caaatcaaca
     2521 tcaactttct ggatcctgcg ttcgcttaat aataaaaatg ttagcgcaat cattttgtgt
     2581 ttatcaggag aaaaaaaatg gctttaagcg cgaattccga cgccgtaacg tatgcaaaag
     2641 cggcgaatac cagaaccgcg gcagaaaccg gcgatcgtat cgaatgggtg aagctatcac
     2701 tggcttttct accgctggcg acgccagtga gtgacgcgaa ggtactgacc ggtcgccaga
     2761 aacctttgac cgaagtggca atcatcattg ccgaaatccg cagtcgcgat ggctttgagg
     2821 gcgttggttt tagctactcc aaacgtgctg gcggccagag tatttatgct cacgccaaag
     2881 agatagccga caatctactg ggcgaagacc ccaatgatat cgacaaaata tacaccaagc
     2941 tgctgtgggc cggagcctcg gtggggcgta gcgggatggc ggtacaggct atctccccta
     3001 tcgatatcgc cttatgggat atgaaggcta aacgtgccgg tctgccactg gcaaaactgt
     3061 tgggcgcgca ccgcgactcc gttcagtgtt acaacacctc aggggggttc ttgcatacac
     3121 cgctcgatca agtgctgaaa aatgtggtga tttcccgcga aaatggcatt ggcggtatta
     3181 agttgaaagt cggacaaccc aactgcgctg aggatattcg ccgcttaacc gcagtacgtg
     3241 aagcgcttgg ggatgagttc ccgttaatgg ttgacgctaa ccagcagtgg gatcgcgaaa
     3301 cggctatccg catggggcgt aaaatggaac agttcaatct tatctggatt gaagaaccat
     3361 tagatgctta cgacatcgaa ggccacgccc agcttgctgc cgcgctggat acgcctatcg
     3421 ccaccgggga aatgctgacc agtttccggg aacacgagca gttgattctg ggcaatgcca
     3481 gcgatttcgt tcagccagat gcgccgcgtg tcggcggtat ctctccgttc ctgaagatta
     3541 tggatctggc ggcgaaacac gggcgtaagc tggcgccgca ctttgcgatg gaagtacacc
     3601 tgcacctttc cgcagcgtat cccctggagc cgtggctgga acatttcgag tggctgaacc
     3661 cattattcaa cgagcaactt gagctgcgcg atggccgcat gtggatttcc gatcgtcatg
     3721 gtctgggttt cacgctcagt gaacaagcgc gccgctggac acaattaaca tgtgaatttg
     3781 gcaaacgccc ttaacccgac tggcgggaat ccgtcccgcc tctcttacct tacaggatgc
     3841 attctgccct tatctgagga gtagataatg aacacaataa taaagtgcac aaaagtgcgt
     3901 cataccattc ttatattttt atttcttgct accgtattta attatgcgga tcgcgcaact
     3961 ctatccgtag ttgccccaat aatgagtaaa gaattaggtt ttgatccgga agcgatgggc
     4021 ctggccttct cctcatttgg tattgcctat gtcattatgc aactacccgg cggttggcta
     4081 ttagaccgct acggttcacg actggtttac ggttgcgcat tgattggctg gtcgttagta
     4141 accatgtttc agggaacgat ctatctgtat ggcagcccat taattgtact ggttactcta
     4201 cgtctgctga tgggcgcgat tgaagcgcct gcctttccgg cgaacagtcg tttaagcgta
     4261 caatagtttc ccaataatga acgaggtttc gttacttcag tttatcaggc tgcgcaatat
     4321 atctcgctgg gcattatcac cccgctaatg acgatcattc tgcataattt aagctggcat
     4381 tttgtcttct attatattgg cgccattggt gtgatgttcg gtatattctg gttaatgaaa
     4441 gtcaaagatc cgatgcacca ctcaaaagtt aatcaagcgg aaattgacta tattcgtagc
     4501 ggtggtggcg agccctctct gggctgtaaa aaggagccgc agaaaataac gttcgcgcag
     4561 attaaaaccg tctgtgttaa ccggatgatg atcggtgttt acatcgggca attctgcgtc
     4621 acctctatca cctggttctt cctgacctgg ttcccgacct atctgtacca ggcgaaaggc
     4681 atgtcgattc tgaaagtcgg ttttgtggcc agtattccag ccattgccgg ttttattggc
     4741 ggcctgctcg gcggcgtgtt ctccgactgg ctactcaaac gcggctatag ccttaccgtc
     4801 gcgcggaaac tgcctgttat ctgcggtatg ttgctctctt gcgtaattgt gatcgccaac
     4861 tacacctctt cagaatttgt ggtcattgcg gcgatgagtc tggccttttt tgccaaaggg
     4921 tttggtaacc tgggctggtg cgtactcagc gacacctcgc cgaaggaagt tctgggtatt
     4981 gctggcggcg tatttaacat gtgcggcaat atggcaagca tcgttacgcc actggtcatc
     5041 ggcgtgattc ttgccaatac tcagtcgttc gactttgcca ttttatacgt tggctcgatg
     5101 ggacttattg gtctcatttc atatctgttt atcgtcggcc cgctggatcg catcacgctg
     5161 acatcatccg cagcctgatt gtccacattg cgaattcttc gctccgctgt tccgggattg
     5221 cactccatcg gaacagcgtt ttttagttgt accgcgcaat tcagatgccg tcgccatact
     5281 caaacgtatg gtgtagcccg ttgaaatgct ggtccatatc catcgacggc ttatcgctgc
     5341 ccggcttgcc gacaatacgc gccggaacgc ctgcggcggt agtgtgcggc gggacaggct
     5401 gtaaaacgac ggagcctgcg ccaattttcg cgccgcgccc cacctcgata ttgccgagaa
     5461 ttttcgcgcc cgcgccaatc atcacgcctt cgcggatttt aggatggcga tcgccgctcg
     5521 ttttcccggt accgcccagg gtgacggatt gcaggatcga cacatcatcc tcaataaccg
     5581 ccgtctcccc caccacaata ccggtggcat ggtcgagcat aatcccgcgg ccaattttcg
     5641 ctgccgggtg aatatccacc tgaaacgaga ccgaaacctg attttgcagg aagatagcca
     5701 gcgcgcggcg acctttattc cacaaccagt gaccaatgcg gtaggcctgt agcgcatgaa
     5761 agcctttcag atataacagc ggcgtggagt atttatccac cgccggatcg cgagtgcgca
     5821 cggcctgaat atcgcaggct gccgacgcga tcatttccgg gtcggcggca taggcttctt
     5881 caactacttc acggatagcg atagcgggca tgatgggcga agccagttta tttgccagca
     5941 tatagctcag cgcactgccc agattttcat gcttgagtag cgtggcgtga taaaaactgg
     6001 ccaacatagg ctcacagtca gctaaagcgc gggcttcagc tttaatattc ttccagacga
     6061 tttccagttc ttcacacggc atggcttact ccagacgggc agaaaacgac caacccgttc
     6121 tgtgcgggtt gggtcgttta tgcaaacagt tccttacggc tagtggcgac tcagctcttc
     6181 cttgcgggcg cgacctaata acgttaatgc tgcctcgcgc gcgttttttc cgcaatacaa
     6241 tacttgataa atttcctcgg ttattggcat ttcaacacca aaacggtgcg ccaattcacg
     6301 aacttctttc gtattgcgat agccttcgac cacctggcca atcttatcct gcgcgccttt
     6361 aacgtccatg ccctggccaa gcatcatgcc aaaacgacgg ttgcgcgact ggttgtcggt
     6421 acaggtcagc accagatcgc ctaaacccgc catccccata aaggtggcgg gatcggcacc
     6481 aagcgctgcg ccaagccgcg acatttcggt cagtccacgc gtgattagcg ccgtgcgggc
     6541 gttcgcgccg aagccgatgc cgtcagacat ccccgcgcca atcgcaatca cgtttttcac
     6601 cgcgccgcca agctgcacgc cgataaaatc cgcattgata tagacgcgaa aactttttcc
     6661 gcagtgcaac agttgctgga gatcgtcggc aaaggtctca tcggttgagg ctagcgagat
     6721 tgccgtcggc aaacccgccg ccagctcttt agcgaacgtc ggaccggaaa tcaccgccag
     6781 cgggatttga tcgcctaacg cctcgcgagc gacatcctgc aacaggcgcc ccgtttccgc
     6841 ttccaggcct ttggtcgccc ataccagacg cgcatccgga cgcatcagcg gtttaatctg
     6901 ccgcagcacg tcgctgaaaa catggcttgg caccaccacc agaatgttac gactggccgc
     6961 cagcgcggtt gctaagtcgc tttccaggtg taacgtatcg ggaaaaggca catcgggaag
     7021 gaacgcgacg ttgcagcgat cgtgctccaa ggtcgcgata tgttttgggt cgtggcccca
     7081 caggacaacc tggtggccgt ttctcgccag agtgatggcg agagcggtgc cgtacgagcc
     7141 ggcaccgatg actgtcattg acgcattact ttggttcatc aggcatcctg atgttcttca
     7201 gtaccttcgc cagcctgctg ctgcaaatag ttcatgaaca gcgcatcaaa gttgaccggc
     7261 gcaaggttca gttgcgggaa cgtaccgcgt gaaaccagac tggtgatgca ctcgcgagca
     7321 tacgggaaca gaatgttcgg gcagtatgct cccaggcaat gcgccatctg agtgccttca
     7381 ataccgctga tggagaaaat accggcctgc tgaacttcgc acaggaacgc ggtttcttcc
     7441 cccagggaag ccgttacggt aacacgcagc acaacttcat aaacgtcatc cgccagttgg
     7501 gaagatgccg tatcaagatc tagtttaacc tctggctgcc aatctttctg gaaaacatgc
     7561 ggtgcgtttg gcgcttcgaa agaaacatcc ttggtataga tacgttggat ctggaaagcc
     7621 atttcagtgt tattttgttc tgacatgtgt aaaacccttt agtgttgtcc ttaaatactt
     7681 gagtacgcct taacgcaaca gcggatccag tccaccacgc gcatccagcg catacaagtc
     7741 gtcacaaccg ccaatgtgct gtgcatcaat aaaaatttgc ggaaccgtcg ttcggccact
     7801 acgtttgatc atctcttcac gcttcacggc gtcgccgtca atcgcaattt cctggaaact
     7861 cacgcccttg ctgtttaaca gcgcctttgc acgatggcaa aacgggcagg ttgctttggt
     7921 gtagatttca atattggcca tgacttcgct cctgtttttt acccgatgga tttcatgtcg
     7981 acgcaagggc aagtcattcc ccttgcgtca tgaaaacgac gggtaatcac ttaccgcgca
     8041 ccagaggcag attctcgccg ctccagcctg ctacgccttc tttcaacaca aagacctttt
     8101 caaagccggc ttttgtcagc gcgttagcgg attcctggca ctgcatacca gaaccgtcga
     8161 ccacgataat tggcttgtct ttgtgctttt ccagttcgcc aacattgttg gctttgattt
     8221 cgctcggcag caaattggtc gcgccagcga tatggccttt acggaaatcg tcacgttgac
     8281 gtaaatccac aacaacggcg tcctctttgt tgataaggcg cgtggcttcg ccgcgtgtaa
     8341 tcaccttaac ttttgaagtc agacctttga acgtggtaaa taaaaccgcc accagtaacg
     8401 caatccaggc gatactcagt atgggatgac ggccaacaaa ttgcataatt tcttgcatgg
     8461 ggggtaacaa ctcccgacgt agtgattaaa aaaccaggaa aggagtatac ctgcgcagtg
     8521 gcgcaaatac agccagagcg tgcactggaa tgcatttttg cggggcgcta cgaaaaaaaa
     8581 tcacgctatt acttgccttc tcacgccagc gcgatccctt tctttgatct tctgaggcta
     8641 ttttatcgat tcagctgtag taaaattacg caattatttt gtctattgag tatgaggttg
     8701 tcgcaatgtc ggtttctaaa aaacctatgg tactggtgat tctggatggc tacggctacc
     8761 gtgaagaaca gcaggataac gctatcttaa acgccaaaac cccggtgatg gatgctctgt
     8821 gggcaaaacg tccgcatacc ctgatcgacg catccggtct ggaagtgggt ctgcctgacc
     8881 gccagatggg caactccgaa gtgggccacg ttaacctggg cgcaggccgc atcgtttatc
     8941 aggacctgac gcgtctggac gttgaaatta aagaacgtac tttctttgct aacccagtcc
     9001 tgaccaatgc ggtagaccag gcgaaaaacg ccggtaaagc ggttcatatt atgggtctgc
     9061 tgtccgcggg cggcgtccac agccacgaag atcacattat ggcgatggtg gagctggccg
     9121 cagagcgcgg cgcagaaaaa atctatctgc acgccttcct cgacggtcgc gacacgccgc
     9181 cgcgcagcgc tgaagcctcg ctgaaaaaat tcgaagacaa attcgccgcg ctgggcaaag
     9241 gtcgcgtggc gtctatcgtc ggtcgttact acgctatgga ccgcgacaac cgttgggatc
     9301 gcgtggaaaa agcgtatgat ctgatgaccc tggcccaggg cgaattccag gcggataccg
     9361 ctgtggctgg cctgcaggcc gcttacgctc gtgatgaaaa cgatgagttt gtcaaagcga
     9421 ccgttatccg cgccgagggc caggctgatg cggcgatgga agacggcgac acgctgattt
     9481 tcatgaactt ccgcgctgac cgcgcgcgcg aaattacccg cgctttcgtt aatgctgatt
     9541 tcgacggctt tgcgcgtaag aaagtggtta atctgaactt cgtgatgctg accgaatacg
     9601 ccgccgatat caaaactgcc gttgcctacc caccagcgtc gctggcgaat acctttggcg
     9661 aatggatggc gaaaaacgac aaaactcagc tgcgtatttc cgaaacggaa aaatatgcgc
     9721 acgtaacctt tttctttaac ggcggcgtag aagaaccgtt tgctggtgaa gagcgtattc
     9781 tgatcaactc accgaaagtg gccacttatg acctgcaacc ggaaatgagc tctgcagaat
     9841 tgactgaaaa attggtcgcg gcgatcgaaa gcggtaagta cgacaccatc atttgtaact
     9901 atccaaacgg cgatatggtc ggtcataccg gcgtgatgga agccgccatc aaagcggtgg
     9961 aagcgttgga taactgcatt gaacaggtaa caaaagcggt tgagtccgtt ggtggacaac
    10021 tgttgattac cgcggaccac ggcaacgcgg agcagatgcg cgatccggcg accggtcagg
    10081 agcataccgc ccacaccaac ctgccggtgc cgctgattta tgtcggcgag aaaaacgtga
    10141 aggcggtcga aggcggcaaa ctttcagaca ttgcgcctac catgctgtcg ctgatgggga
    10201 tggaaatccc gcaagagatg actggtaagc cgctgttcat cgtggaataa tccctcccca
    10261 tgaggggaaa ggcgattaac accattcaac aggccgtgaa accaagaacg ttttcagtca
    10321 ggcctttgtt ctacgccagc gtacttagcg ctggcgtatt gttgtgcgcc ttttccgccc
    10381 acgcggatga ccgtgatcaa ctcaaatcta ttcaggccga tatcgccgcg aaagaacgcg
    10441 acgtacgcca gcagcagcaa cagcgcgcca gcctcttggc acaactgaaa acccaggaag
    10501 aggccatctc ggccgcagcg cgtaagctgc gcgaaacgca aagcactctg gatcagttaa
    10561 acgcgcaaat tgatgagatg aacgcctcaa ttgccaaact ggagcagcaa aaagccagcc
    10621 aggagcgtaa tctcgctgcg cagttggacg ccgctttccg ccagggcgaa cacaccggca
    10681 ttcagcttat tcttagcgga gaagagagcc agcgtgggca acgcctgcag gcctacttcg
    10741 gctatctgaa ccaggcgcgc caggagacta tcgccgaact gaaacagact cgcgaacagg
    10801 tcgccacgca aaaagccgag ctggaagaga agcaaagcca acaacaaacg ttgctgtatg
    10861 aacagcgcgc tcagcaggcg aagctggaac aggcgcgtaa tgaacgtaag aaaacgcttg
    10921 ccggactgga gtcgtctatt cagcaaggcc agcaacagtt aagcgaacta cgcgccaacg
    10981 aatcacgcct acgcaacagt atcgcgcggg
//
LOCUS       DAGWFR010000135        10839 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.137, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000135 DAGWFR010000000
VERSION     DAGWFR010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 10839)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10839)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10839
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.137"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(1..1163)
                     /locus_tag="MOX77_003467"
                     /pseudo
     CDS             complement(1..1163)
                     /locus_tag="MOX77_003467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416342.4"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            1362..2153
                     /gene="kdgR"
                     /locus_tag="MOX77_003468"
     CDS             1362..2153
                     /gene="kdgR"
                     /locus_tag="MOX77_003468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator KdgR"
                     /protein_id="HCA3358903.1"
                     /translation="MANADLDKQPDSVSSVLKVFGILQALGEEREIGITELSQRVMMS
                     KSTVYRFLQTMKTLGYVAQEGESEKYSLTLKLFELGARALQNVDLIRSADIQMRELSR
                     LTKETIHLGALDEDSIVYIHKIDSMYNLRMYSRIGRRNPLYSTAIGKVLLAWRDRDEV
                     KQILDGVEYKQSTGRTITSTEALLPLLDEVRAQGYGEDNEEQEEGLRCIGVPVFDRFG
                     VVIAGLSISFPTLRFSEERLQEYVAMLHVAARKISEQMGYNDYPF"
     gene            complement(2365..2604)
                     /locus_tag="MOX77_003469"
     CDS             complement(2365..2604)
                     /locus_tag="MOX77_003469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358904.1"
                     /translation="MRLIIRAIVLFALVWIGLLMSGYGILVGSKVNAAGLGLQCHYLT
                     ARGTSTAQYLHTNSGIIGFSDCPIFRKIATVVDNG"
     gene            2757..2900
                     /gene="mgrB"
                     /locus_tag="MOX77_003470"
     CDS             2757..2900
                     /gene="mgrB"
                     /locus_tag="MOX77_003470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoP/PhoQ regulator MgrB"
                     /protein_id="HCA3358905.1"
                     /translation="MKKFRWVVLGIVVVVCLLLWAQVFNIMCDQDVQFFSGICAINKF
                     IPW"
     gene            2971..3258
                     /locus_tag="MOX77_003471"
     CDS             2971..3258
                     /locus_tag="MOX77_003471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebO family protein"
                     /protein_id="HCA3358906.1"
                     /translation="MNDVLNSGAFSLASLIVSMVVLVVGLALWFFVNRASSRANEQIE
                     LLEALLDQQKRQNALLRRLCEANEPEKEAEPATAASEPKEDEDIIRLVAER"
     gene            3907..4050
                     /locus_tag="MOX77_003472"
     CDS             3907..4050
                     /locus_tag="MOX77_003472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YobF family protein"
                     /protein_id="HCA3358907.1"
                     /translation="MCGIFSKEVLSKHVDVEYRFSAEPYISASSSNVSVLSMLCLRAK
                     KTL"
     gene            4063..4272
                     /gene="cspE"
                     /locus_tag="MOX77_003473"
                     /gene_synonym="gicA"
                     /gene_synonym="msmC"
     CDS             4063..4272
                     /gene="cspE"
                     /locus_tag="MOX77_003473"
                     /gene_synonym="gicA"
                     /gene_synonym="msmC"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antiterminator/RNA stability
                     regulator CspE"
                     /protein_id="HCA3358908.1"
                     /translation="MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTL
                     AEGQNVEFEIQDGQKGPAAVNVTAI"
     gene            4492..6237
                     /gene="ftsI"
                     /locus_tag="MOX77_003474"
     CDS             4492..6237
                     /gene="ftsI"
                     /locus_tag="MOX77_003474"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan glycosyltransferase FtsI"
                     /protein_id="HCA3358909.1"
                     /translation="MKKKSDGDTRNFTPIRFALLCTAILLSMALLLGRVAWLQIVTPS
                     KLVKQEDMRSLREVTTASPRGMITDREGRPLAVSVPVNAVWADPKTIISKGGVGYNER
                     WQALASALHLSLSTLAERVNSNPAGRFIYLARQVSPQQAEWIDKLNLPGINLREESRR
                     FYPAGHVAANLIGFTNIDGQGIEGIEKSFNAQLTGKPGSRLVRKDKFGHVIENITEVN
                     PVPAHELQLSIDERLQTVTEDALDNAVIWNKAESGAAVLINIPTGEILSMASYPDFNP
                     NNREGAQLDDFRNRAISDTFEPGSTVKPLVIMTALQQGIVQPDSVIDTHPFTLDGHRI
                     RDVGYYPELTLTGILQKSSDTGVSHLSLAMPVQKLMDTYKSFGFGVPTGLGLTGESSG
                     LLPKRRYWSDLDRATFAFGYGLMVTPLQLAHVYATIGSFGIYRPLSITKVDPPVIGTR
                     VMPEELVHEVEHMMESVALPGGGGTKAAVRDYRIAVKTGTAKKIGDDGKYVDKYVAYT
                     AGVAPASNPRFALVVVINNPQNGAYYGGAVSAPVFSQIMGDVLRLENVEPDGMPADSD
                     HLLVMHGSHVAVPGS"
     gene            6303..7112
                     /gene="rlmA"
                     /locus_tag="MOX77_003475"
     CDS             6303..7112
                     /gene="rlmA"
                     /locus_tag="MOX77_003475"
                     /EC_number="2.1.1.187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (guanine(745)-N(1))-methyltransferase"
                     /protein_id="HCA3358910.1"
                     /translation="MSFTCPLCHQPLTQINSSVICPQRHQFDVAKEGYINLLPVQHKR
                     SRDPGDSAEMMQARRAFLDAGHYQPLRDAVINLLRERLDQSATAILDIGCGEGYYTHA
                     FAEALPGVTTFGLDVAKTAIKAAAKRYSQVKFCVASSHRLPFADASMDAVIRIYAPCK
                     AQELARVVKPGGWVVTATPGPHHLMELKGLIYDEVRLHAPYTEQLDGFTLQQSTRLAY
                     HMQLTAEAAVALLQMTPFAWRARPDVWEQLAASAGLSCQTDFNLHLWQRNR"
     gene            complement(7109..7675)
                     /gene="mntP"
                     /locus_tag="MOX77_003476"
     CDS             complement(7109..7675)
                     /gene="mntP"
                     /locus_tag="MOX77_003476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese efflux pump MntP"
                     /protein_id="HCA3358911.1"
                     /translation="MHFTATVLLAFGMSMDAFAASIGKGATLHKPKFSEALRTGLIFG
                     AVETLTPLIGWGLGILASKFVLEWNHWIAFVLLIFLGGRMIIEGIRGGSDEDETPLRR
                     HSFWLLVTTAIATSLDAMAVGVGLAFLQVNIIATALAIGCATLIMSTLGMMIGRFIGP
                     MLGKRAEILGGVVLIGIGVQILWTHFHG"
     gene            complement(8085..8543)
                     /locus_tag="MOX77_003477"
     CDS             complement(8085..8543)
                     /locus_tag="MOX77_003477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF986 domain-containing protein"
                     /protein_id="HCA3358912.1"
                     /translation="MTITDLVLILFIAALLAYALYDQFIMPRRNGPTLLSIALLRRGR
                     IDSVIFVGLVAILIYNNVTSHGAQMTTWLLSALALMGFYIFWIRTPRIIFKQRGFFFA
                     NVWIEYNRIKEMNLSEDGVLVMQLEQRRLLIRVRNIDDLEKIYKLLIENQ"
     gene            complement(8602..9453)
                     /locus_tag="MOX77_003478"
     CDS             complement(8602..9453)
                     /locus_tag="MOX77_003478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000228151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose transporter subunit IID"
                     /protein_id="HCA3358913.1"
                     /translation="MVDMTKTTTEKKLTPSDIRGVFLRSNLFQGSWNFERMQALGFCF
                     SMVPAIRRLYPENNDARKQAIKRHLEFFNTHPYVAAPVLGVTLAMEEKRANGAEIDDG
                     AINGIKVGLMGPLAGVGDPIFWGTVRPVFAALGAGIAMSGSLLGPLLFFILFNLVRLA
                     TRYYGVAYGYRKGVDIVKDMGGGFLQKLTEGASILGLFVMGALVNKWTHVNIPLVVST
                     ITGQDGQTRVTTVQTILDQLMPGLVPLLLTFACMWLLRKKVNPLWIIVGFFVIGIAGY
                     SVGLLGQ"
     gene            complement(9466..10266)
                     /gene="manY"
                     /locus_tag="MOX77_003479"
     CDS             complement(9466..10266)
                     /gene="manY"
                     /locus_tag="MOX77_003479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002910918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose transporter subunit IIC"
                     /protein_id="HCA3358914.1"
                     /translation="MEITTLQIVLVFIVACIAGMESVLDEFQFHRPLIACTLIGAVLG
                     DMKTGIIIGGTLEMIALGWMNIGAAVAPDAALASIISTVLVIAGHQSIGAGIALAIPL
                     AAAGQVLTIIVRTITVAFQHAADKAAENGNLTALSWLHVSSLFLQAMRIAIPAVIVAI
                     SVGTSEVQGMLNAIPEVVTGGLNIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVTAA
                     FTNFNLVALGVIGAVMAILYIQLSPKYNRVAGAPAAAAGNNDLDNELD"
     gene            complement(10319..>10839)
                     /gene="manX"
                     /locus_tag="MOX77_003480"
     CDS             complement(10319..>10839)
                     /gene="manX"
                     /locus_tag="MOX77_003480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PTS mannose transporter subunit IIAB"
                     /protein_id="HCA3358915.1"
                     /translation="PAKPMGPNDYMVIGLARIDDRLIHGQVATRWTKETNVSRIIVVS
                     DEVAADTVRKTLLTQVAPPGVTAHVVDVAKMIRVYNNPKYAGERVMLLFTNPTDVERI
                     VEGGVKVTSVNIGGMAYRQGKTQVNNAVSVDEKDIEAFKKLNERGIELEVRKVSTDPK
                     LKMMDLIAKVAK"
BASE COUNT         2830 a         2616 c         2790 g         2603 t
ORIGIN      
        1 ccaccgctgc gctcacgcgg cgcggaagtg ataatggtgt gattattcgg cgactggaac
       61 aggccaaacc ctgcgccgca aaggatcatc ggccagataa tattcagatc ggagggggtg
      121 cctggcaaca tgaccagcgc aaacaacccg gctgccatta tcaccattcc cagcgccccc
      181 agcaaaccgg catgaagacg ttctatcagg tatcccgcca gcggcgccat caccatcgtt
      241 gccagcggcc agggcgtcaa taacaggccg gtttctactt cgctacggcc cagcacggtt
      301 tgcagataaa aaggtagcga gaccatggct aacatttgcg cgcagaacga gcaaattgac
      361 gtgccgatcg agagtgaaaa aagcggaatg cgtaacaagt cgatgggtaa caaagggacg
      421 ggcaaagaaa gctggcggcg cacgaagaaa aacccgacca cgaccagaac gagcagctct
      481 gcgccaatca acgttagcga ctgtccctgg gcaaagccgc tcaatgcggt aatcagcaga
      541 ccaaatgtga gcgcattcat taccgcgctc ggtaagtcaa agcgcggctt agtgtcatgg
      601 gcgatgtttg ctggtaaaaa gcgtatggcc agaattaacg cgatgatacc taacgggaca
      661 ttaatcagaa acagccattt ctatgatgag atggacaaaa tcgccgcggc gatcgtcgga
      721 cccgcggcgg aagagacggc gacgataaaa gagttaattc ccatacctcg tcccagatga
      781 cgctgggggt agataagacg aatcagcgcc gtgtttacgc tcattagcgc cgcgccgcca
      841 aattcctgcg cgatgcgcgc cagcgtcagc atctgcagcg agtctgaaag cgcgcaaaac
      901 aatgatgaaa gcagaaatac cactaaacca catttataga tccggtgata accaaacatg
      961 tcgcctaaaa aagacaggga aagtagtgag acgacaatgg cgatttggta cgcattgaca
     1021 atccagatag agctggcagg ggaggcatgt aaatcagtcg caatggttgg cagcgcgaca
     1081 ttagcgattg cgccatccag aaccgccatc gaaataccga taataatcgt caggatagcg
     1141 ccgtatctct gcgggagggg cagccgtcgg cccgtgtttt ttccataagt attttgtaat
     1201 aaggggaatt atgagctgaa taataatgtt agcattaata ctgagttgtt atgtcgtaga
     1261 tttgtaacga agtaagcaaa gatggattgc gggcgacctg gcgtgaaatt ataataaaaa
     1321 ctcgttctga attttataaa acgctcgtaa tgaggtgata aatggcaaac gcagatctgg
     1381 ataagcagcc tgattctgta tcttctgtgc tgaaagtttt cggcattctg caggcgctgg
     1441 gtgaagagcg tgaaataggg attaccgagc tatcgcagcg cgtcatgatg tcgaaaagca
     1501 ccgtttatcg ctttttgcaa accatgaaaa cgctgggcta cgtggctcag gagggggagt
     1561 ctgaaaaata ctctctgacg ctaaagctgt ttgagctggg cgcgcgagct ttgcaaaatg
     1621 ttgatctcat ccgcagtgcg gacattcaga tgcgcgaact gtctcgtctg acaaaagaaa
     1681 ctatccatct tggcgcgctg gatgaagaca gcattgtcta tatccataaa attgactcta
     1741 tgtacaatct gcggatgtac tcacgtattg ggcgtcgtaa tccgctgtac agtacggcca
     1801 tcggtaaagt gcttctggcc tggcgcgacc gtgatgaggt taagcagatt ctcgacggcg
     1861 tagagtataa gcaaagcacg ggacgcacga ttaccagcac tgaagcgttg ctgccgctgt
     1921 tggatgaagt gcgtgcgcaa ggctacggtg aagataacga agaacaggaa gaagggttac
     1981 gttgtatcgg cgtaccggta tttgaccgtt ttggcgtagt catcgcaggg ttaagcattt
     2041 cgttcccgac gctgcgtttt tcagaagaac gcctacagga atatgtggct atgttacacg
     2101 tcgccgcgcg taaaatttct gaacaaatgg gttacaacga ttatcccttc taagcaacgt
     2161 tattagcatg acgttaaaaa aaagcagcta catttttcgt agctgctttt tttataacat
     2221 cgggtgggat gaaatcgtaa aagtagataa tatctgtcgg cttatttaac ggttattaaa
     2281 atattattta acagtactta tgaacaacag ccaatatagg ggaattattg gtgatagttt
     2341 cactgtgaaa ttatttattg ccgcttagcc attatccacc acggtggcga tttttctgaa
     2401 aatgggacag tcggaaaagc cgataatgcc gctgttggta tggagatatt gcgccgtgct
     2461 ggtgccgcgt gcggtcaggt aatggcactg taaacccagc cccgcagcgt tcactttact
     2521 tcccaccagg atgccatagc cgctcatcag caggcctatc cacaccaggg caaacaatac
     2581 aattgcgcga atgatcaaac gcattactac ctctttttta gttagaataa gagtagcgtg
     2641 tacattgatt gaaacaagtg aatcattcct aaaaacatat aatgccgcta cagttactcc
     2701 tggtttaagt aacttatgat aatttagcga cataagatgt aagatcggag agtggagtga
     2761 aaaaatttcg atgggtcgtt ctcggcatcg tggtggtagt atgcctgttg ctgtgggcgc
     2821 aggtgtttaa tatcatgtgc gatcaggatg tacaattttt cagcggtatt tgcgccatca
     2881 ataaatttat tccctggtaa acgttttaca ccagagattt ccttcccgtg tagcagtggt
     2941 agaatgacgt ctctacattg aggtggtgaa atgaacgacg ttttaaactc tggtgcgttt
     3001 tctcttgcat ctttaatagt atcaatggtg gttctggtgg tggggctggc gctctggttc
     3061 tttgtcaacc gggcaagttc ccgtgccaac gagcagatag aactgctcga agcgttgttg
     3121 gatcaacaga agcggcaaaa cgcgttgtta cgccgccttt gcgaagcaaa cgaaccagaa
     3181 aaagaagcgg aacccgcaac agcggcaagc gaaccgaaag aggatgagga catcattcgt
     3241 ctggttgctg aacgataatg cttaccgggg cgcaaatggc gccagtgcca tacgccccat
     3301 ttccccgtcg gatctctccg cgttgccgtt tgcaactgat actacagcat caacacctta
     3361 cctaatatat ggctttatat gcaacatagt tttatatgta taacaaatgg acatatggca
     3421 tttttgtgat accgctcatt ctctattaaa agcgaaacgt ttctctctct ttatggattg
     3481 tcattgtttg ttcattattt taaggcattc tgtaaagacg cagaacatca caaaaagcgg
     3541 tgtcgaaaat cgcttttctt ttctattatt ttgattaaaa ggtgtttttt atcattgtga
     3601 caatttatgc ataactcagc ataaaaagtg atatgaaaaa tacagctttt aaatgtgatt
     3661 tgatgcactg gaagaagcga aattattgag ctatggtaga aaaatggctt ttcagcagtg
     3721 acgttgtcag gagtccgtca gcgcgtgagg atatatcttt cgcaattttg ttgcataaac
     3781 gtgttgtcaa tttgtgaagg ttctcgtaat ttgtgcgacg gatcgagaca cgtttaaaaa
     3841 tggcttgcca taattaacgt tatatgtgat aacaggcttt gggttaaacg aggtacagtt
     3901 ctgtttatgt gtggcatttt cagtaaagaa gtcctgagta aacacgttga cgttgaatac
     3961 cgcttctctg ccgaacctta tattagtgcc tcaagcagta atgtctcagt tttatctatg
     4021 ttatgcctac gggcaaagaa aacactctaa ggaattttgc aaatggcaaa gattaaaggt
     4081 caagttaagt ggttcaacga atccaaaggt tttggcttca ttactccggc tgacggcagc
     4141 aaagatgtgt tcgtacactt ctccgctatc cagggcaatg gtttcaaaac tctggctgaa
     4201 ggccagaacg ttgagttcga aattcaggac ggccagaaag gtccggctgc tgttaacgta
     4261 acagctatct gatcgacacc actgatttga tgcgtttgtc gcgtcagcct cagatataaa
     4321 gcctcgctaa aagcggggct ttttaattca atatccttca aaatgtgtct ggatgcgctc
     4381 tcgttagcga tttgttgcaa aggcgcgatg ttattagcat tgttttttct ggtttttccg
     4441 gccgtttccc gttaaatcaa tcacctgaaa aatgattcgg ctggagatca ggtgaaaaag
     4501 aaaagcgacg gcgatacccg taattttaca cccatacgtt ttgcactact ttgcactgcc
     4561 attctgctca gtatggcatt gttgttaggg cgggtggcat ggctgcaaat tgttacgccg
     4621 tcgaaactgg tgaaacaaga agatatgcgc tcgcttcgtg aagtgaccac ggcctctcca
     4681 cgcggcatga tcaccgacag agaagggcgg cccttagcgg tgagcgttcc ggttaatgct
     4741 gtctgggccg atccgaaaac tatcataagc aaaggcggcg ttggctacaa tgagcgctgg
     4801 caggcgctgg ccagcgcctt acatctgtct ctcagtacgc ttgcggaacg ggtaaacagt
     4861 aacccggcag gtcgttttat ctacctcgcg cgccaggttt caccccagca agccgaatgg
     4921 atagataaac tgaatctacc gggtattaac ctgcgggaag agtcgcgccg tttttaccct
     4981 gccggacatg tagcggccaa tttgatcggc tttaccaata tcgacgggca gggaatagaa
     5041 ggtattgaaa agagctttaa cgcgcaactg acgggaaaac cgggctcccg gctggtgcgt
     5101 aaagataaat ttggtcacgt tattgagaac attacggaag tgaatccggt tcctgctcat
     5161 gaacttcagc ttagcattga tgaacgtctg caaacggtta ccgaagatgc gctggataac
     5221 gccgtcatct ggaacaaagc ggaatccggc gctgccgtat tgattaacat cccaacgggt
     5281 gaaattctct cgatggcgag ctacccggat ttcaacccga acaaccgtga aggcgcgcag
     5341 ttggacgatt ttcgtaaccg cgcgattagc gacactttcg aacccggttc tactgtgaag
     5401 ccattggtca ttatgactgc gttacagcag ggtatcgtgc aaccggacag cgttatcgat
     5461 acccatcctt ttactctcga tggacaccgt atccgcgacg tcggctacta tccggaactg
     5521 acattaaccg gcattttgca aaaatccagc gataccggcg tttctcacct ttctctggcg
     5581 atgccggtgc agaaattaat ggatacttat aaaagctttg gtttcggcgt gcctaccgga
     5641 ctgggtctca ccggagagag cagcgggtta ttaccgaaac gccgttactg gagtgattta
     5701 gatcgcgcta ccttcgcttt tggctatgga ttaatggtga cgccgctgca actggcgcat
     5761 gtttatgcca cgattggcag ctttggtatc taccgtccgt tatcgatcac caaagttgat
     5821 ccgcccgtga tcggcacgcg agtaatgccg gaagaactgg tgcacgaggt ggaacatatg
     5881 atggagagcg tcgcgttgcc tggcggcggc ggaacaaaag ccgcagtaag agactaccgt
     5941 attgcggtca aaaccgggac ggcgaaaaaa attggcgatg atggtaaata cgttgataag
     6001 tatgtggcat ataccgcagg cgtcgcgccg gcaagtaacc ccagatttgc gctggtggtg
     6061 gtgattaata atccacaaaa tggggcttat tatggcggtg cggtatctgc gcccgtattc
     6121 agccagatca tgggcgatgt actgcggctg gaaaatgttg agccagacgg tatgccagcc
     6181 gattcagatc accttctggt gatgcatggc agccacgttg cggttccggg ctcgtaaagg
     6241 attttcccgg ggcgcaattc gcgttacact tgcgcccttt agcgccccag tccggagttg
     6301 tcatgtcgtt tacctgtccg ctttgccatc aaccgcttac gcagattaat agcagcgtta
     6361 tatgtccaca gcgccatcag tttgatgtgg cgaaagaggg ctacatcaat ctgctgccgg
     6421 tacagcataa acgttcgcgc gatccgggcg acagcgccga aatgatgcag gcgaggagag
     6481 cgtttcttga tgcaggccat tatcagccgc tgcgcgatgc ggtgattaac ctgttgcgcg
     6541 agcggctgga tcagtcggcc acggcgattc tggatattgg ctgcggcgag gggtattaca
     6601 ctcatgcttt tgccgaggcg ttgccgggag ttaccacgtt tggactggac gttgctaaaa
     6661 cggcgatcaa agcggcggcg aagcgctatt cgcaggtgaa gttttgtgtg gcgtcaagcc
     6721 atcgactgcc ctttgccgat gcgtcaatgg atgcggtgat cagaatctac gctccgtgta
     6781 aggcgcagga attggcgcgt gtggtgaaac ctggtggttg ggtcgttacc gccacgccgg
     6841 ggccgcatca tctgatggaa ctaaaagggc tcatttatga tgaggtgcgt ttacatgcgc
     6901 cgtataccga gcagctcgac ggattcacat tgcagcagag tacccgcctt gcttatcaca
     6961 tgcagctcac cgccgaagcg gctgtagcac tgttgcaaat gacgccattt gcctggcgcg
     7021 ccagaccaga cgtgtgggaa caactggctg ccagcgccgg acttagctgc cagacggatt
     7081 tcaaccttca tctctggcag cgtaaccgtt aaccgtgaaa atgcgtccag aggatctgga
     7141 cgccaattcc tatcagtacg accccgccga gaatttcagc acgcttaccc agcattgggc
     7201 cgataaagcg accgatcatc attccgaggg tggacatgat aagcgtggcg caaccgatag
     7261 ctaatgcggt tgcgatgatg tttacctgca aaaacgccag accgacgcca accgccatcg
     7321 catcgaggct ggtcgcgata gccgtcgtga ctaatagcca aaagctgtga cgacgtaacg
     7381 gtgtttcatc ttcatcacta ccgccgcgga taccttcgat gatcatgcgt ccgcccagaa
     7441 agatcagcag aacaaaggct atccagtggt tccattccag aacgaattta ctcgccaata
     7501 tccccagccc ccagccgatc aacggggtta gcgtttcaac cgcgccaaag ataagaccgg
     7561 tacgcaacgc ttctgagaat ttgggtttat gtagggtggc gcctttgcca attgatgccg
     7621 cgaaagcatc catcgacatg ccgaaagcga gaagaacagt agcagtaaag tgcatgacag
     7681 cgtcctgacc ggggtatcca ttaaacacat cactgccccc agcaaacatg catgtcgcca
     7741 ttctgtgacg aaatacacag cagttgatgc gcctatggtc tcgcctgacc agcggcggct
     7801 ggtccgtacg cgccacgttt tgcaacgagt atgttgacac gtacatttcc ggagtctgga
     7861 aatcggctac tccctaattg acggcgcaac attaacatat ttttagaata taaaacaaca
     7921 gcgataaaat attatttgcc ttctaattga aaacgatttt catttagatt tattcatcaa
     7981 taaaacgtta aattaaataa caattggtca atagaaaata tagccttagc tatattatga
     8041 ttcgaaataa aattcgaaaa acatagttga ggctatatct taagctattg attttcaata
     8101 agaagtttat atattttttc cagatcgtcg atattgcgta cacggataag caagcgtcgt
     8161 tgttctaatt gcatcaccag tacgccgtcc tccgataaat tcatctcttt aatacggtta
     8221 tattctatcc agacattggc gaagaaaaag ccacgttgtt taaagatgat ccgtggcgtg
     8281 cggatccaga atatataaaa ccccattaac gccagcgcgc ttaataacca tgtggtcatc
     8341 tgcgctccgt ggctggttac gttgttataa ataaggatgg cgaccagccc aacgaagata
     8401 acgctgtcta tgcgaccgcg gcggagcagg gctatagaaa gcagagtggg gccattgcga
     8461 cggggcatga tgaactgatc gtagagagcg taagccaata atgcggcaat aaagagaatc
     8521 agcaccaggt ccgtgatagt catttatcct ccagagaaat aaaaaaacgg ggccgtttgg
     8581 ccccggtagt gtacaacagc cttactggcc cagcagtcct acggagtagc cggcgatacc
     8641 aatgacgaag aagcccacga taatccacag cgggttaact ttcttacgca gcagccacat
     8701 acaggcaaag gtcaacagta gcggaaccag acccggcatc agctggtcga gaatggtttg
     8761 cacggtggta acgcgtgtct gaccatcctg accggtgatg gtggagacca ccagcgggat
     8821 attcacatgc gtccacttgt taaccaatgc ccccatgaca aacaggccga ggattgacgc
     8881 cccctcagtc agtttttgca ggaagccgcc gcccatatct ttaacgatat cgacgccttt
     8941 gcggtagcca taagccacgc cataataacg ggtcgccaga cgcaccaggt taaacaggat
     9001 gaaaaacagc agcggaccaa gcaggctgcc gctcattgca atacctgcgc ccagcgccgc
     9061 gaatactgga cggacggtac cccagaagat agggtcgccg acgcctgcca gcggtcccat
     9121 cagaccgact ttgataccgt tgatagcacc atcgtcaatc tctgcgccgt tcgcacgctt
     9181 ttcttccatt gccagcgtta cgcccagtac cggcgccgca acgtaaggat gagtgttaaa
     9241 gaactccagg tgacgcttaa tcgcctgttt acgcgcgtca ttattctccg gatacaggcg
     9301 acgaatcgcc ggcaccatag agaagcagaa gcccagcgct tgcatacgtt cgaagttcca
     9361 tgacccctgg aacaggttag aacgaagaaa tacgccgcga atatcgctcg gagtgagttt
     9421 tttctcggtg gtagttttag tcatatcaac catttcgctc acctgttagt ccagttcgtt
     9481 atcgagatcg ttattgccag cagccgctgc aggcgcgccc gctacacggt tgtatttcgg
     9541 gctcagctgg atgtaaagaa tagccatcac tgcgccgatg acacccagtg cgaccaggtt
     9601 gaagtttgtg aaagccgcgg tgacgaaacc gaggtagaag aacggcatca ggtagcctgc
     9661 gcgcatcatg ttgataacca tcgcataacc aaccacgacg atcatgccgc cggcgatgtt
     9721 cagaccgcct gtgacgactt caggaatcgc attcagcatt ccctgtactt cgctggtgcc
     9781 tacggagatg gcaacgataa ccgccgggat ggcgatacgc attgcctgca ggaacagaga
     9841 agaaacgtgc agccaggaga gcgccgtcag gttgccgttt tcagccgcct tgtccgccgc
     9901 gtgctggaat gccacggtga tggtacgaac gataatggtc agtacctggc ctgccgccgc
     9961 cagcggaatc gccagcgcga taccggcgcc aatgctttga tgcccagcga tgaccagaac
    10021 ggtagagatg atggacgcca gtgcggcatc aggcgcaacg gcagcaccga tgttcatcca
    10081 gcccagagcg atcatttcca gagtaccgcc gatgataata ccggttttca tgtcccccag
    10141 aacggcgccg attaaggtac aggcgatcag cggacggtgg aactgaaatt catcaagtac
    10201 cgactccata cccgcgatac atgcgacgat gaacaccagc acaatctgaa gagtggtaat
    10261 ctccattgta cttctcctat tgctatctta agtgtgaaag ctaattaaat gccggcggtt
    10321 atttcgccac tttggcaatt aaatccatca ttttcagttt cggatcggtg gaaactttac
    10381 gcacctcaag ctcgatgccg cgctcgttga gctttttaaa ggcttcgata tccttttcat
    10441 cgacggaaac ggcgttgttc acctgcgttt taccttgacg ataggccata ccgccaatgt
    10501 tcacggaggt gactttcacg ccgccctcaa cgatgcgctc gacgtcggta ggattggtaa
    10561 acagaagcat cacgcgttcg ccggcgtatt tcgggttatt gtagacgcga atcatcttcg
    10621 cgacgtcaac cacatgcgcc gtaacgcccg gcggcgcaac ttgcgtcagc agcgttttac
    10681 gtacggtatc cgccgcgact tcatcgctca caacaataat acggctgaca ttggtctctt
    10741 tggtccagcg ggtagcgacc tgaccgtgaa tgaggcggtc atcaatacgg gcaagcccga
    10801 taaccatata atcattcggg cccatcggtt ttgccggcg
//
LOCUS       DAGWFR010000136        10736 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.138, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000136 DAGWFR010000000
VERSION     DAGWFR010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 10736)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10736)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10736
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.138"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..1625
                     /locus_tag="MOX77_003481"
     CDS             <1..1625
                     /locus_tag="MOX77_003481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HCA3358916.1"
                     /translation="VARGRVLVLAHVKELVAQNHAKYCALGLEADIFAAGLKRKESQG
                     KVVFGSVQSVARNLDAFQEEFSLLIVDECHRIGDDEDSQYQQILTHLSKVNPHLRLLG
                     LTATPFRLGKGWIYQFHYHGMVRGNDNALFRDCIYELPLRYMIKHGYLTPPERLDMPV
                     VQYDFSRLQAQSNGLFSEADLNRELKKQQRITPHIISQIMEFAQTRKGVMIFAATVEH
                     AKEIVGLLPADDAALITGDTPGPERDALIDNFKAQRFRYLVNVSVLTTGFDAPHVDLI
                     AILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYAGNPHDLYAPEVGSPKGKSDNVPV
                     QVFCPACGFANTFWGKTTADGTLIEHFGRRCQGWFEDDDGHREQCDFRFRFKNCPQCN
                     AENDIAARRCRECDAILVDPDDMLKAALRLKDALVLRCSGMTMQHGQDEKGEWLKITY
                     YDEDGADVSERFRLHTPAQRTAFEQLFIRPHTRTPGVPLRWITAADIVAQQALLRHPD
                     FVVARMKGQYWQVREKVFDYEGRFRRAHELRG"
     gene            1750..2034
                     /gene="rplY"
                     /locus_tag="MOX77_003482"
     CDS             1750..2034
                     /gene="rplY"
                     /locus_tag="MOX77_003482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000494192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25"
                     /protein_id="HCA3358917.1"
                     /translation="MFTINAEVRKEQGKGASRRLRAANKFPAIIYGGSEAPIAIELDH
                     DQVMNMQAKAEFYSEVLTLVVDGKEVKVKAQAVQRHAYKPKLTHIDFVRA"
     gene            complement(2143..2763)
                     /locus_tag="MOX77_003483"
     CDS             complement(2143..2763)
                     /locus_tag="MOX77_003483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358918.1"
                     /translation="MSKGIRQRPPVNFSLFRQVLYAHIVAFLMMLMLGMVFTVLSLVL
                     FYTYGANWLLSLFICPLFLLSGLFITGFAFKSTWSSIRYYYDKGQLKRYGLNLDATLT
                     HKEKVEIRIDNAKRQVRVDELELHVLFDFQFDSKTWSCGDLLTNEKVFDALNDGQTIP
                     IRILPWKPESASVRQRALFNRLKGMNTAAETTDPRLGEALIECGEV"
     gene            complement(2791..3798)
                     /gene="yejK"
                     /locus_tag="MOX77_003484"
     CDS             complement(2791..3798)
                     /gene="yejK"
                     /locus_tag="MOX77_003484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoid-associated protein YejK"
                     /protein_id="HCA3358919.1"
                     /translation="MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTTTVVEMVAELH
                     RVYSAKNKAYGLFNEESELAQALRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGI
                     VLFCHYRYLAVEYLLVTVLNNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETN
                     PQSTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAE
                     RQNVRQQVYSYCNEQLQAGEEIELESLSKELSGVSEVSFSEFTAEKGYELEESFPADR
                     STLRQLTKYAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTSGG
                     K"
     gene            3978..4205
                     /locus_tag="MOX77_003485"
     CDS             3978..4205
                     /locus_tag="MOX77_003485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YejL family protein"
                     /protein_id="HCA3358920.1"
                     /translation="MPQLSRYSDEHVEQLLSELLSVLEKHKAPTDLSLMVLGNMVTNL
                     INTSVAPAQRQAIANSFARALQSSISEDNAH"
     gene            4237..5997
                     /gene="pbgA"
                     /locus_tag="MOX77_003486"
     CDS             4237..5997
                     /gene="pbgA"
                     /locus_tag="MOX77_003486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin transport protein PbgA"
                     /protein_id="HCA3358921.1"
                     /translation="MVTHRQRYREKVSQMVSWGHWFALFNILLATLLGSRYLFVADWP
                     TTLAGRIYSYLSIVGHFSFLVFATYLLILFPLTFIVMSQRLMRFLSAILATAGMTLLL
                     IDSEVFTRFHLHLNPIVWELVINPDQNEMARDWQLMFISVPVILLIEMLFATWSWQKL
                     RSLTRRRHFARPLAAFFFVSFIASHLIYIWADANFYRPITMQRANLPLSYPMTARRFL
                     EKHGLLDAQEYQRRLVEQGNPEAVSVQYPLSNLHYRDMGTGQNVLLITVDGLNYSRFE
                     KQMPELATFAEQNIDFTRHMSSGNTTDNGIFGLFYGISPGYMDGVLSTRTPAALITAL
                     NQQGYQLGLFSSDGFASPLYRQALLSDFSMPAAQTQSDAQTASQWIDWLGRYAQEDNR
                     WFSWISFNGTNIDDSNQKNFVKRYASAASDVDAQINRVLNALREAGKFDNTVVIITAG
                     RGIPLTPEENRFDWSQGHLQVPLVIHWPGTPAQRINVLTDHTDVMTTLMQRLLHVSTP
                     ANEYSQGQDIFTVPRRHNWVTAADGSTLAITTPQMTLVLNNNGHYQTYDLHGEKIKDQ
                     KPQLSLLLQVLTEEKRFIAN"
     gene            6071..6147
                     /locus_tag="MOX77_003487"
     tRNA            6071..6147
                     /locus_tag="MOX77_003487"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:6105..6107,aa:Pro,seq:ggg)
     gene            complement(6458..6680)
                     /locus_tag="MOX77_003488"
                     /pseudo
     CDS             complement(6458..6680)
                     /locus_tag="MOX77_003488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000457616.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4113 domain-containing protein"
     gene            complement(6768..9134)
                     /gene="sspH2"
                     /locus_tag="MOX77_003489"
     CDS             complement(6768..9134)
                     /gene="sspH2"
                     /locus_tag="MOX77_003489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-2 type III secretion system effector E3
                     ubiquitin transferase SspH2"
                     /protein_id="HCA3358922.1"
                     /translation="MPFHIGSGCLPATISNRRIYRIAWSDTPPEMSSWEKMKEFFCST
                     HQTEALECIWTICHPPAGTTREDVINRFELLRTLAYAGWEESIHSGQHGENYFCILDE
                     DSQEILSVTLDDAGNYTVNCQGYSETHRLTLDTAQGEEGTGHAEGASGTFRTSFLPAT
                     TAPQTPAEYDAVWSAWRRAAPAEESRGRAAAVQKMRACLNNGNAVLNVGESGLTTLPD
                     CLPAHITTLVIPDNNLTSLPALPPELRTLEVSGNQLTSLPVLPPGLLELSIFSNPLTH
                     LPALPSGLCKLWIFGNQLTSLPVLPPGLQELSVSDNQLASLPALPSELCKLWAYNNQL
                     TSLPTLPSGLQELSVSDNQLASLPTLPSELYKLWAYNNRLTSLPALPSGLKELIVSGN
                     RLTSLPVLPSELKELMVSGNRLTSLPMLPSGLLSLSVYRNQLTRLPESLIHLSSETTV
                     NLEGNPLSERTLQALREITSAPGYSGPIIRFDMAGASAPRETRALHLAAADWLVPARE
                     GEPAPADRWHMFGQEDNADAFSLFLDRLSETENFIKDAGFKAQISSWLAQLAEDEALR
                     ANTFAMATEATSSCEDRVTFFLHQMKNVQLVHNAEKGQYDNDLAALVATGREMFRLGK
                     LEQIAREKVRTLALVDEIEVWLAYQNKLKKSLGLTSVTSEMRFFDVSGVTVTDLQDAE
                     LQVKAAEKSEFREWILQWGPLHRVLERKAPKRVNALREKQISDYEETYRMLSDTELRP
                     SGLVGNTDAERTIGARAMESAKKTFLDGLRPLVEEMLGSYLNVQWRRN"
     gene            complement(9303..9506)
                     /locus_tag="MOX77_003490"
     CDS             complement(9303..9506)
                     /locus_tag="MOX77_003490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCA3358923.1"
                     /translation="MPDTDENRRADIHAAGSLKTVKSFKGFIRRKSCAGRQNRKLNAR
                     ALIPDDLVIVESDPEKIDTLAVK"
     gene            complement(9803..10594)
                     /locus_tag="MOX77_003491"
     CDS             complement(9803..10594)
                     /locus_tag="MOX77_003491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber protein"
                     /protein_id="HCA3358924.1"
                     /translation="MISLEDASLTKKGIVKLSSATDSDSEALAATPKAVKTVMGEVRT
                     KAPLDSPAFTGTPTTPTPPGDAKGLQTTNAEFVRKLIAALVGSVLEPLDTLQELADAL
                     GNDPNFATTVLNKLAGKQPLDETLTALSGKSVDGLIEYVGLRETISRAADALQKSQNG
                     GDIPDKDLFVRRIGAARAFDGAVIIGCDDNPWTTAEFIVWLESQGAFNHPYWMCRGSW
                     SYAYNKIITDTGCGNICLAGAVIEVMGVRGAMTIRVTTSHSVSGW"
BASE COUNT         2454 a         2972 c         2668 g         2642 t
ORIGIN      
        1 gcgtcgcccg cggacgggta ctggtgctgg cgcatgtgaa agagctggtc gcgcagaacc
       61 acgccaaata ttgcgcgctg gggctggaag cggatatttt cgccgccgga ctcaaacgta
      121 aagagagtca gggcaaagtc gtgttcggca gcgtacagtc ggtggcgcgt aatcttgacg
      181 ccttccagga ggagttttcg ctgttgattg tcgatgaatg ccaccgcatc ggtgacgatg
      241 aagacagtca gtatcagcaa atcctcactc acctgagtaa agttaatcct cacttacgtc
      301 tgcttggact caccgccacg ccttttcgcc tcggaaaagg ctggatttat caatttcatt
      361 atcacggtat ggtgcgcggc aacgacaacg ctctgtttcg cgactgtatt tatgaactgc
      421 cgctgcgcta tatgattaaa cacggctatc tgacgccgcc tgagcggctt gatatgccag
      481 tggtccaata cgatttcagc cgcctgcagg cccaaagcaa tgggctgttc agcgaagccg
      541 acctgaaccg cgagctgaaa aagcagcagc ggattacgcc gcacatcatc agccagatta
      601 tggaatttgc gcaaacgcgc aaaggcgtga tgattttcgc cgccacggtc gaacatgcga
      661 aagagattgt cggtctgctt ccggcggacg acgcggcgct gattaccggc gatacgccag
      721 ggcccgagcg cgacgcgctg attgataatt tcaaggcgca gcgttttcgc tatctggtta
      781 acgtctcggt actgaccacc ggctttgacg ccccacacgt tgatctcatc gcgattctac
      841 gtcccacgga gtcagttagt ctttaccaac aaattgtcgg gcgtggtctg cgccttgcgc
      901 cgggaaagac cgattgcctg attcttgatt acgcaggcaa cccgcacgac ctgtatgccc
      961 cggaggtcgg tagcccgaag ggaaaaagcg ataacgtccc tgtccaggta ttttgcccgg
     1021 cctgcggctt tgccaacacc ttctggggga aaaccactgc cgacggcacg ctgattgaac
     1081 actttggccg tcgctgccag ggctggtttg aggatgacga cggccatcgc gagcagtgcg
     1141 attttcgctt tcgcttcaaa aactgcccgc agtgtaatgc cgaaaacgat attgccgccc
     1201 gacgctgccg ggaatgtgac gccattctgg tcgacccgga cgatatgtta aaagcggcgc
     1261 tcaggctcaa ggatgcgtta gtcctgcgct gtagcggaat gacgatgcag catgggcagg
     1321 atgagaaagg cgaatggctg aaaatcactt actatgacga ggacggcgcg gatgtcagtg
     1381 agcgcttccg cttgcacacg cccgcccagc gtaccgcttt cgaacagcta tttattcgcc
     1441 cgcatacgcg cacgcccggc gttcctttac gctggatcac ggcggcggat attgtcgcgc
     1501 agcaggcgct gttgcggcat cccgattttg tggtcgcgcg gatgaaaggc cagtactggc
     1561 aggtgcgtga aaaagtgttc gactatgaag gccgcttccg ccgggcgcac gaattacgtg
     1621 gttaattgta cttttcattg atgtaacggc gatttgagta tagaatcccg cccgcctttg
     1681 catacgcaaa gcagatcact tacctgttgc tgggtcgcct gtagcaggaa ttattaaaga
     1741 gagatttaaa tgtttactat caacgcagaa gtacgtaaag agcagggtaa gggtgcgagc
     1801 cgccgcctgc gcgccgctaa caagttcccg gcaatcatct acggcggttc tgaagccccg
     1861 attgctatcg aactggacca cgaccaggtg atgaacatgc aagctaaagc tgaattctac
     1921 agcgaagttc tgaccctcgt tgttgacggt aaagaagtaa aagttaaagc tcaggctgta
     1981 cagcgtcacg cttacaaacc gaagctgact cacatcgact tcgttcgcgc gtaatcgcct
     2041 ggaagttgaa gaaaaacccc gccccggcgg ggttttttta tgcgtttaat tgaatttgac
     2101 gacatgcaga gcaacgagaa cccactttgc ttttctgctt tcttacacct cgccacattc
     2161 aattagcgcc tcccctaatc gaggatctgt agtttccgcc gcggtattca tacctttaag
     2221 ccgattgaat aatgcccgtt gacgaacgct ggcactttcc ggtttccatg gcaaaattcg
     2281 tattggtatc gtttgcccat cattcaacgc atcaaatacc ttttcattgg tcagtaagtc
     2341 gccgcagctc catgtcttgc tatcaaactg aaaatcaaat aagacatgga gttccagttc
     2401 atctacacgc acttgacgct ttgcattatc gatgcgtatt tccaccttct ctttatgcgt
     2461 caaagttgca tcaagattga gtccataccg tttcaactgc cccttgtcgt aatagtaacg
     2521 tatgctggac caggttgatt taaaagcaaa tccagtaatg aataaaccac ttaacaagaa
     2581 cagcgggcat atgaacaagc tcagtaacca gttggcgcca taagtataaa acagtaccaa
     2641 cgagagaacg gtgaacacca tgccgagcat caacatcatc aaaaatgcga caatgtgcgc
     2701 atacaaaacc tgccgaaata aactgaaatt aacaggcggc ctctgacgta ttcctttact
     2761 cactacggcg tccttttatg tcgtatgcct ttatttcccg cccgacgtgc gtcgctgcaa
     2821 ctgatcgcgc aaattcggcg gcgtcccttt gatagtcagg gtatcggtcg ccgggtccca
     2881 gaaaatccgc tcgcccagta gcatcgcatc aaagttaatc gttaacccgc cgccgctgcc
     2941 ggcatatttg gttaactggc gtagcgtact gcgatctgcc gggaagctct cttccagctc
     3001 atagcctttt tcggcggtaa attcgctgaa gctgacttca ctgacgccgg aaagctcttt
     3061 agacagcgat tccagctcaa tctcttcccc ggcttgtaac tgctcgttgc agtagctgta
     3121 cacctgctga cgcacgttct gacgttctgc tttatccaac tgcgcttctg cggtgaaatc
     3181 atccactgcc tgcaacaggc cgcgattctg cgctttggcg ttcaaccctt cgctggcgcc
     3241 gaggaaatcc ataaagaagt cagcgacctt gcgccctacc cgacctttca ggaacgtcag
     3301 gtagcgggtc gattgcggat tagtttccca ctcggtaaga tcgatacgcg ccacgatatc
     3361 cgcatggttg atatcaagat aatgcgtcgg gttaatgtcc agattttcat tgacccgcat
     3421 actgctcagg ttgttcagta ccgtaaccag cagatactcc accgccaggt aacgataatg
     3481 gcagaacaat acaatgccgc cgtccgcaaa gggatatttc gccagttcgt cacgcaggcg
     3541 tccggtcgcc gcccggctaa aggcaagaaa atcttcttcc ccctgacgtt gcaaccgcag
     3601 cgcttgcgcc agttcactct cttcattaaa caggccatac gccttattct tggcgctata
     3661 gacccgatgc agttcagcca ccatctcgac aacggtggtt gtcggctcca gcaatgaatc
     3721 gcgcaagacc agctcaagat tttgctcatc gcgcttgata agctggtgca gggcaatctg
     3781 gttgatatcc agactcatga taaactctcc tttaagaccg ggcggtattc aaccaccgcc
     3841 tgccggaaga cgcaagcaat cgccctgtca tttcaggcgt tatccgtaac gcgaatgatt
     3901 taggggataa aaatgcagaa aaaaaactgt tgctacggta atatgttgcc ctttcatgaa
     3961 caaacagatt ttgatttatg ccacaactct cccgctatag tgatgaacat gttgaacaac
     4021 tgctgagcga actgctcagt gtactggaaa aacataaggc gccgaccgat ctttccctga
     4081 tggtactggg aaatatggtc accaacctta tcaacaccag cgtggcgccg gctcaacgcc
     4141 aggcgattgc gaactctttt gcccgcgcct tgcagtcttc gattagcgaa gacaacgcgc
     4201 actaaaaagc cgactccgga gaaacaagcg acaggtatgg taactcatcg tcagcgctac
     4261 cgtgaaaaag tctcccagat ggttagctgg gggcactggt tcgctctgtt caatatactg
     4321 ttggctacgt tgctcggcag ccgttacctg tttgtcgccg actggccgac aacgcttgcg
     4381 ggtcgcatat actcctacct gagcattgtc gggcacttta gctttctggt gttcgccacc
     4441 tatttgctta ttctttttcc gctcacgttt atcgtgatgt cccagcggct gatgcggttt
     4501 ttatcagcca ttctggcgac cgcgggtatg acgttgttgc ttatcgacag cgaagtcttt
     4561 acccgttttc acctgcatct taaccccatt gtctgggaac tggtcatcaa ccctgaccag
     4621 aacgaaatgg cgcgcgactg gcagcttatg tttattagcg tgccagttat cttattgatt
     4681 gagatgctat ttgcgacatg gagttggcaa aagctgcgca gtctcacgcg ccgccgccat
     4741 ttcgcaaggc cgcttgcggc attctttttc gtctccttta tcgcatcgca tcttatctac
     4801 atctgggcag acgctaattt ttaccggccg attaccatgc agcgggcaaa cctgccgctc
     4861 tcttatccga tgacggcgcg acgttttctt gaaaaacacg gtctgctgga tgcgcaggaa
     4921 tatcagcgcc gtctggtaga gcaaggcaat ccggaagcgg tctccgttca gtacccgctc
     4981 agcaatttgc actatcgcga tatgggcacc ggtcagaatg tgctgctcat taccgtagac
     5041 ggcctgaact attctcgctt tgagaagcag atgccggagc tggctacatt tgccgagcaa
     5101 aacatcgact tcacccgtca tatgagttca gggaatacca ctgataacgg tattttcggc
     5161 ctgttctatg gcatatcgcc aggctatatg gatggcgtgt tatccaccag aacgcctgcg
     5221 gcgctcatta ccgcgttgaa tcagcaaggc taccaactgg gactgttttc ttcggatggc
     5281 ttcgccagcc cgctttatcg tcaggcatta ctgtccgatt tctcgatgcc ggcagcgcaa
     5341 acgcagtctg atgcgcaaac ggccagccag tggatagact ggcttgggcg ctacgcacag
     5401 gaagataacc gctggttctc atggatatcg tttaacggta ctaacattga tgacagtaac
     5461 cagaaaaatt ttgttaagcg ttacgccagt gccgccagcg acgtggatgc gcaaatcaat
     5521 cgggttctga acgcgctgcg agaggccggt aaattcgaca atactgtcgt gatcattacc
     5581 gcaggacgcg gcataccgtt gacgccggaa gaaaatcgct tcgactggtc gcaaggtcat
     5641 ctgcaagtac cgctggtgat ccactggccg gggacgcctg cgcagcgtat taatgtgctt
     5701 accgatcata ccgatgtgat gaccacgttg atgcaacgcc tgttacatgt cagcacgcca
     5761 gcgaacgaat attcacaggg ccaggacatc tttaccgttc cacgtcgtca taactgggta
     5821 acggcggcag acggcagtac gctggcaatc acgacgccgc aaatgaccct ggtgctcaat
     5881 aataacggtc attatcagac ctatgactta cacggcgaga agatcaaaga tcagaagccg
     5941 cagctcagtc tgctgctgca agtgctaaca gaagagaaac gttttatcgc taactgatta
     6001 attataaatc agttagcacc gtttcccctt gcattcgcgt tggaaagagg tagtattagc
     6061 acccacaagt cggcacgtag cgcagcctgg tagcgcaccg tcatggggtg tcgggggtcg
     6121 gaggttcaaa tcctctcgtg ccgaccaaaa ttccccttaa aagccagcct gccagggctg
     6181 gtttttttat atatccaatt tgcaaatggt gaaatgatgg tgaaatagct atcgaaggtc
     6241 actgcaaatt gacttcaagc tccctccaac gcgaaaagtt gaacagatga cttaaataca
     6301 ttgattagtc atccttaacc agtagaatcc gccacgactg gtaactattc aatacacgca
     6361 ctatcgaacg atcgccagtt tgccgcagcc cgttcttgca tacaatgtgg ctgcggcaca
     6421 ccatcacatc agaaatttga aaatcagggt aaacctgtca cttaacctga agcaggtctt
     6481 catagcgggt ggtatatcgg gatgacagta tgtttctctt catagcccac tgttgctgga
     6541 taccctcccc ggcaaagtac agctttcccc tgcccttctt tgcattcagg tgatccagta
     6601 cttccatcgg cttctcgcta ccggcgcgcg gcgcgttatc atcgaaaaag ttgcgccgcg
     6661 ccctgactga agaagtctcc cctatttcac ctgtacatca tccgtactgt ctgatgttgt
     6721 tcgtccggga atatctttgt cgcaccgcac ctcattcacc tggtgcatca gttacgacgc
     6781 cactgaacgt tcagatagct ccccagcatc tcctccacaa gaggtcgcag gccatccaaa
     6841 aatgtctttt tcgcgctctc catcgctctt gctccgatag tgcgctctgc atcggtatta
     6901 ccgaccagcc cagacggtct cagctctgtg tcagacagca tccggtacgt ttcctcataa
     6961 tccgatattt gcttttcacg aagcgcgtta acgcgtttcg gcgctttgcg ctccagcact
     7021 ctgtgtaacg gcccccactg cagtatccac tccctgaact cgcttttttc agcggctttc
     7081 acctgaagct ccgcgtcctg aaggtctgta accgtcacgc cggatacgtc aaagaaacgc
     7141 atttctgacg tcacgctggt cagcccgagt gatttcttca gcttattctg atacgccagc
     7201 cagacctcaa tttcatcaac gagagccagc gttctgacct tttcccgggc aatctgttcc
     7261 agttttccca gacggaacat ctcacgcccc gtggcaacca gcgccgcgag atcgttatcg
     7321 tattgccctt tttctgcatt atgtaccagc tgtacgttct tcatctggtg caaaaaaaat
     7381 gtgacccggt cctcgcagct tgaggttgcc tctgttgcca tagcaaaggt gtttgctctc
     7441 aacgcctcat cttcagccag ttgtgccagc caggacgata tctgtgcctt aaaccccgcg
     7501 tcctttatga agttttccgt ctcactcagt ctgtccagga agaggctgaa ggcgtcggcg
     7561 ttatcttcct gtccgaacat atgccatctg tctgcaggag ccggttcccc ctcccgggca
     7621 ggcaccagcc agtcagcggc cgccaggtgc agtgcccgag tttcccgggg ggcggaggct
     7681 cccgccatat cgaatcgtat tatggggcct gaatagccag gcgcgctggt gatctcccgc
     7741 agcgcctgca aagtacgttc agacagtggg ttcccttcca gatttacggt tgtctctgaa
     7801 gacagatgaa tgagactttc cggcaggcgg gtcagctggt tacgatagac cgacagcgac
     7861 agtagtcctg acggcagcat cggcaggctg gtcagccggt taccagatac catcagctcc
     7921 ttcagttctg acggcagcac cggcagactg gtcagccggt taccagatac aatcagctcc
     7981 ttcagtcctg acggcaacgc cggcaggctg gtcagccgat tattataggc ccacagctta
     8041 tataattctg acggcagcgt cggcaagctg gccagttggt tatcagatac cgacagctcc
     8101 tgtagccctg acggcaacgt cggcaggctg gtcagctggt tattataggc ccacagctta
     8161 cataattctg acggcagcgc cggcaggctg gccagttggt tatcagatac cgacagctcc
     8221 tgtagccctg gcggcaacac cggcaggctg gtcagttgat taccaaagat ccacagctta
     8281 catagtcctg acggcagcgc cggcaggtgg gtcagcgggt tactaaagat cgacagttcc
     8341 agtagtcctg gcggcagcac cggcaggcta gtcagctggt taccagagac ctccagcgtc
     8401 cgcagttctg gcggcagcgc cggcaggctg gtcagattat tatcaggaat aaccagtgtg
     8461 gtaatatgcg cgggtaaaca gtctggcaag gtggtaagac ctgattctcc cacgttaagc
     8521 actgcattgc cattattcag gcaggcacgc attttctgta ccgctgctgc acggccgcgt
     8581 gactcttctg cgggtgcagc ccttctccac gctgaccaga cagcatcata ctctgctggc
     8641 gtctgtggag ccgttgtggc agggaggaag gatgtcctga atgtcccgga tgccccttcc
     8701 gcgtgtcctg tgccctcctc accctgtgct gtgtccaggg tgaggcgatg tgtttcactg
     8761 tacccctggc aatttacggt atagttcccg gcatcatcaa gggtgactga caatatctcc
     8821 tgactgtctt catccagaat acagaagtaa ttttccccgt gctggccgga atgaatgctt
     8881 tcctcccatc cggcatacgc gagcgtcctg agcagttcaa atctgttgat cacatcctcc
     8941 cgcgtcgttc cggccggcgg gtgacaaatc gtccagatgc actccagcgc ttcagtctgg
     9001 tgcgttgagc aaaaaaattc cttcattttt tcccaggaac tcatttcagg gggggtatca
     9061 gaccaggcaa tacgataaat gcggcgatta ctgatggtgg cgggaagaca tccgcttcca
     9121 atatgaaagg gcataacaaa aaacctttat aaatttacat atagtatctg tccggcagac
     9181 atcatctctt cctggtctta atttcacaat aaggttatcg gcggattcat ggtcgtcctg
     9241 acatggcggg cttcagaagg tgcagaagaa aaatccgtta tgatgaccgg atggcgggac
     9301 tgtcatttta cagctaaagt gtcgattttt tcagggtcgc tttccacgat gaccagatca
     9361 tccggtatca acgcccgggc gttcaatttt cgattctgcc tgcctgcgca gctcttccgg
     9421 cgaataaacc ctttgaacga ctttaccgtc tttaaactgc cagcagcatg aatatcagcg
     9481 cgacggtttt catccgtatc aggcaactct gcaacgctct ggccagcagg ccacagcccg
     9541 gaaacatcac gcgtaataca cgtaataaca tcgttatcgt cgtaggtaat tttcagcgtg
     9601 tctgctgaaa ataattgctg gcacccatac cagtcctgac catcctctga tttaagatac
     9661 gccgcatcgg cgaataatgt gtcatctggt tccggtgcat acggaatgaa atttttaata
     9721 tttaaaaact gtttgttctt tttatttttt ttccgctgtc ataattattc cttcttatac
     9781 acttggggct gtcacccacg tatcaccaac cagatactga atgggacgtt gtcacccgaa
     9841 tagtcatcgc gccacgcact cccattacct caatcactgc gccagcgaga cagatattac
     9901 cgcagccagt atccgtgatg attttgttat aagcgtaaga ccaggagcca cgacacatcc
     9961 agtaagggtg attgaatgcg ccctgagact ccagccagac gataaactcc gccgtcgtcc
    10021 acggattatc atcacagccg ataataactg cgccatcaaa cgctcgcgcg gcaccgatac
    10081 gacgcacaaa caaatccttg tccggaatat cgccgccatt ctgtgatttt tgtaatgcat
    10141 cggcggcacg acttatggtt tctcgcaaac caacgtattc gataagaccg tcaacgcttt
    10201 ttcctgacag cgccgtcagg gtttcgtcca gcggctgctt gcccgccagt ttattcagta
    10261 ccgtggtggc aaagttcgga tcatttccca acgcgtcagc cagttcctgc agggtgtcca
    10321 gtggctccag tacggaacca accagcgcgg caatcagttt gcggacaaac tccgcgtttg
    10381 ttgtctgaag ccctttagca tcgcctggcg gcgtcggtgt ggtcggcgtt ccagtgaatg
    10441 ccgggctgtc cagcggcgct ttggtccgta cctcacccat aacggttttt accgcctttg
    10501 gtgtggccgc cagcgcttcg ctgtcactgt ccgtggcact gcttaattta acgatacctt
    10561 ttttcgtcag gcttgcatct tccagggaaa tcacgtctgc gatatcctcg gcccgtttcg
    10621 cggcctcttc ggctctggtt gccgattctc cggctgcagc tctgctttgc gctgccagtg
    10681 atgcgctggt atcagatgcg gcggcgtggg tggatgccta cgatgctgat gacgag
//
LOCUS       DAGWFR010000137        10732 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.139, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000137 DAGWFR010000000
VERSION     DAGWFR010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 10732)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10732)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10732
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.139"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..1887)
                     /locus_tag="MOX77_003492"
     CDS             complement(<1..1887)
                     /locus_tag="MOX77_003492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HCA3358925.1"
                     /translation="MTKAGKITAAITGTFLLLIAIVILLIATFDWNRLKPTINQKVST
                     ELNRPFAIRGDLGVVWERQKQESGWRSWVPWPHVHAEDVILGNPPDIPEVTMVHLPRV
                     EATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWTFNLAQDKNTDPNAKPSAWS
                     FRLDNILFDQGRIAIDDKVSKADITILVDPLGKPLPFSEVTGTKGKADKSTVGDYVFG
                     LKAQGRYNGEPLTGTGKIGGMLALRSESTPFPVQADFRSGNTRVAFSGVVNEPMKMGG
                     VDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFNYRGFNGRIGD
                     SDIHGTFTYTTGKPSPKLEGDVESRQLRLADLGPLIGVDSGKDAEQSKRSEQRKGEKN
                     VQPADKVLPYDRFETDKWDVMDADVRFKGRRIEHGGSLPISDLSTHIILKNADLRLQP
                     LKFGLAGGSIVSNIHLEGDKKPMQGRADIQARRLKLKELMPDVELMQKTLGELNGDAD
                     IRGTGNSVAALLGNSNGNLKLLMNDGLISRNLMEIVGLNVGNYIIGQIFGDDEVRVNC
                     AAANLNIANGVARPQIFAFDTENALINVTGTASFASEQLDLTIDPESKGIRIITLRSP
                     LYVRG"
     gene            complement(1997..2764)
                     /gene="pdeH"
                     /locus_tag="MOX77_003493"
     CDS             complement(1997..2764)
                     /gene="pdeH"
                     /locus_tag="MOX77_003493"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic-guanylate-specific phosphodiesterase"
                     /protein_id="HCA3358926.1"
                     /translation="MIKQVIQQLRVPDAGIENLQERRYWLQCERAYTYQPIYQTDGRL
                     MTVELLTAVTHPDNPSRRIAPDRYFAELAVRHRIDVVKEQLHQLEQKADFFTRHRLLA
                     SVNVDGPTLIAMRQQPDILAAMERLPWLRFELVEHIRLPKDSSFASMCEFVPLWLDDF
                     GTGMANFSALSEVRYDYIKVARELFVMLRQSPEGRNLFILLLQLMNRYCRGVIVEGVE
                     TLEEWRDVQRSPAFAAQGYFLSRPVPLISLEEVILTL"
     gene            2993..3922
                     /locus_tag="MOX77_003494"
     CDS             2993..3922
                     /locus_tag="MOX77_003494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HCA3358927.1"
                     /translation="MSKKIAVIGECMIELSQKGADVQRGFGGDTLNTSVYIARQVDSA
                     ALAVHYVTALGTDSFSQQMLEAWQHENVDTSLTQRMENRLPGLYYIETDDTGERTFYY
                     WRNEAAAKFWLESEQSAAICETLATFDYLYLSGISLAILSPTSRDKLLSLLRECRANG
                     GKVIFDNNYRPRLWTSREETQQVYQKMLECTDIAFLTLDDEDALWGKQPVEEVIARTH
                     AAGVQEVVVKRGADSCLVSIQGEALIDVPAVKLPKEKVIDTTAAGDSFSAGYLAVRLT
                     GGSATDAAKRGHLTASTVIQYRGAIIPHDAMPQ"
     gene            complement(3976..5463)
                     /locus_tag="MOX77_003495"
     CDS             complement(3976..5463)
                     /locus_tag="MOX77_003495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HCA3358928.1"
                     /translation="MQGTKIRLLAGSLLMLASAGYVQADALQPDPAWQQGTLANGLQW
                     QVLATPQRPSDRIEVRLQVNTGSLTESTQQSGFSHAIPRIALTQSGGLDAAQARSLWQ
                     QGFDPKRPMPPVIVSYDSTLYSLSLPNNRNDLLKEALTYLANVSGKLTITPETVNHAL
                     SSEDMVATWPADTKEGWWRYRLKGSALLGHDPAEPLKQPVDAAKIQAFYEKWYTPDAM
                     TLIVVGNIDARSVAEQINKTFGTLKGKRETPAPVPTLSPLRAESVSIMTDAVRQDRLS
                     IMWDTPWQPIRESAALLRYWQADLAREALFWHIQQELTKNNAKDIGLGFDCRVLFLRA
                     QCAINIESPNDKLNTNLSLVANELAKVRDKGLSEEEFTALVAQKNLELQKLFATYART
                     DTDILTGQRMRSLQNQVVDIAPEQYQKLRQNFLNSLTVDMLNQNLRQQLSQEMALILL
                     QPQGEPEFNMKALKATWDEIMVPATAAAVEADEAHPEVTETPAAQ"
     gene            complement(5683..6969)
                     /gene="dctA"
                     /locus_tag="MOX77_003496"
     CDS             complement(5683..6969)
                     /gene="dctA"
                     /locus_tag="MOX77_003496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate transporter DctC"
                     /protein_id="HCA3358929.1"
                     /translation="MKTSLFKSLYFQVLTAIAIGILLGHYYPELGAQMKPLGDAFVKL
                     IKMIIAPVIFCTVVTGIAGMESMKAVGRTGAVALLYFEIVSTIALINGLIIVNVVQPG
                     AGMNVDPATLDAQAVAVYAAQAKEQGIIAFLMDVIPGSVIGAFASGNILQVLLFAVLF
                     GFALHRLGSKGQLIFNVIESFSQVIFGIINMIMRLAPIGAFGAMAFTIGKYGVGSLVQ
                     LGQLIICFYITCILFVVVVLGTIARVTGFSIFKFIRYIREELLIVLGTSSSESALPRM
                     LDKMEKLGCRKSVVGLVIPTGYSFNLDGTSIYLTMAAVFIAQATNSHMDIFHQITLLV
                     VLLLSSKGAAGVTGSGFIVLAATISAVGHLPVAGLALILGIDRFMSEARALTNLVGNG
                     VATVVVAKWVKELDHQKLDDVLNNRAPDGKTHEISS"
     gene            complement(7127..9133)
                     /gene="hmsP"
                     /locus_tag="MOX77_003497"
     CDS             complement(7127..9133)
                     /gene="hmsP"
                     /locus_tag="MOX77_003497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001266355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm formation regulator HmsP"
                     /protein_id="HCA3358930.1"
                     /translation="MRVSRSLTIKQMAMVAAVVMVFVFVFCTVLLFHLVQQNRYNTAT
                     QLESIARSVREPLSSAILKADLPGAETILESIKPAGVVSRADVVLPNQFQALRKRFIP
                     ERPVPVMVTRLFELPVQISLPVYSLERPANPQPLAYLVLQADSYRMYKFVMSALSTLV
                     TIYLLLSLILTVAIAWCVNRLIVHPLRKIARELNDIPQQELIGHQLALPRLHQDDEIG
                     MLVRSYNLNQQLMQRQREEQTDNAMRFPVSELPNKAFLMALLEQVITRQQTTALIIVT
                     CETLRDTAGVLQETQREILLLTLVEKLKSVLAPRMVLTQVSGYDFAIIAHGVKEPWHA
                     ITLGQQILTIINERLPIQGIQLRPSCSIGIAMYYGDLTAEALYGRAVSAAFTARRKGK
                     NQIQFFDPAQMEAAQQRLTEESDILTALDNHQFAIWLQPQVEMRSGNVLSAEALLRMQ
                     QPDGSWELPEGLIERIESCGLMVTVGHWVLEESCRQLAAWQERGVTLPLSVNLSALQL
                     MHPGMVSDLLELLNRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRIALDDF
                     GMGYAGLRQLQHMKSLPVDILKIDKMFVDGLPDDHSMVTAIILMARSLNLQLIAEGVE
                     DEAQRAWLEQAGVNVAQGFLFARPVPADIFEERYLSHENPDYKS"
     gene            complement(9307..10732)
                     /gene="bcsC"
                     /locus_tag="MOX77_003498"
                     /pseudo
     CDS             complement(9307..10732)
                     /gene="bcsC"
                     /locus_tag="MOX77_003498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462517.1"
                     /note="frameshifted; internal stop; incomplete; missing
                     N-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsC"
BASE COUNT         2549 a         3062 c         2762 g         2359 t
ORIGIN      
        1 cccgcgcacg taaagcggcg atcgcagcgt aataatacga atccccttac tttccggatc
       61 aatggttaaa tcgagctgtt cagaggcgaa gctcgccgta ccggtcacgt taatcaacgc
      121 attttctgta tcaaaagcaa aaatttgcgg tcgcgccacg ccgttcgcaa tattgagatt
      181 cgccgccgcg cagttaaccc gcacttcgtc atcgccaaaa atctgcccga taatatagtt
      241 gccgacgttc agccccacga tttccatcag gttgcggcta atcaatccat cattcatcaa
      301 taatttgaga ttgccgttac tgttgccaag cagcgcggcg accgaattgc ccgtgccgcg
      361 aatatccgca tcgccgttca gctcgcccag cgttttctgc atcagctcca catccggcat
      421 cagttcttta agcttcagcc gacgcgcctg tatatccgcc cgcccctgca tcggcttttt
      481 atccccttcc agatggatgt tggagacaat actgccgcct gccagaccaa acttcagcgg
      541 ctgtagacgt aagtcggcgt ttttcaggat gatatgggtc gaaagatcgc taatcggtag
      601 actgccgcca tgctcaatac gccggccttt aaaccggaca tcggcgtcca tgacgtccca
      661 tttgtcggtt tcaaagcgat cgtaaggcaa cactttatcc gccggctgaa cattcttctc
      721 gcctttgcgc tgttcagacc gtttcgactg ctcagcgtct ttcccggaat ccacgccaat
      781 cagcggccca agatcggcca ggcgtaactg gcgcgattcg acatcgcctt ccagtttggg
      841 gctcggttta ccggtggtat aagtgaaggt gccgtggata tcactgtcgc caatgcgccc
      901 gttaaaaccg cgataattaa ataccgatga cttttcggcg tcaattttcg ctaccaatcg
      961 cccatcggtc tcaaacggcg gcgtatccgg cagcagcacg ccggttaaat catataaatc
     1021 gcccagtgaa tcgccagaga atttaagccg cagatcgacg ccgcccattt tcatcggctc
     1081 gttcaccacg ccgctaaaag ccacccgcgt attgccagag cggaaatcgg cctgcacagg
     1141 aaaaggcgta ctttcgctac gtagcgccag cataccgcct attttgcccg taccggtcaa
     1201 cggttccccg ttataacgcc cctgcgcctt caggccgaag acatagtcgc ccacggtgga
     1261 tttgtctgct ttgcctttcg ttcccgtcac ttcgctgaac ggcaacggtt tgcctaacgg
     1321 atcgaccaga atagtgatat ccgctttact gaccttatca tcgatcgcga ttcgcccctg
     1381 gtcgaagaga atattatcca gccggaagga ccaggcggaa ggtttagcat tggggtccgt
     1441 attcttgtct tgcgcgaggt taaaggtcca gttattggtt ttctcggaca gacgaataag
     1501 acgcgcgtcg ggtttcacca gtttgatcca cggcagccag acggttttgg tcaggagcgc
     1561 cagcggggca agcgtcgcct caacgcgtgg cagatgcacc atcgtgactt ccggaatatc
     1621 cggcggattg ccgagaatga cgtcttccgc gtgaacatgc ggccacggta cccagcttcg
     1681 ccagccggac tcctgttttt ggcgttccca caccacgcct aaatcgccgc gaatagcgaa
     1741 aggccggttc aattcggtag agactttctg gttgatggtc ggtttgaggc ggttccagtc
     1801 aaatgttgcg atcaacaaaa tcactatggc gatcaacaac aagaaagtcc ctgtgatggc
     1861 ggcggttatt ttgcctgctt tagtcatgtg ttatttcctc acttcttccc ttgcctgtcc
     1921 taaagatagt tcagccagac gaaaaaggag gatgaccgca cctcgtaata ccacgtatta
     1981 cgggaacagt ctggcgttac agggtcagaa tcacctcttc gagcgatatc agcggcacgg
     2041 gtcgagaaag aaaatagccc tgggcggcaa aggcgggcga acgctgcaca tcacgccact
     2101 cttccagagt ctccacgcct tcgacaataa cgccgcggca gtagcggttc atcagttgca
     2161 gcagcagaat gaacaggttg cgcccctccg gggactggcg cagcatgacg aacagctcgc
     2221 gcgccacttt aatgtagtca taacgcactt cgctcagcgc tgaaaaattg gccataccag
     2281 taccaaaatc atccagccac agcgggacga actcacacat cgaggcgaaa gaggagtctt
     2341 tcggcaaacg aatatgttcc accagttcaa aacgcagcca gggtaagcgc tccatcgctg
     2401 ccagaatgtc cggctgttgt cgcatggcaa tcagcgtagg gccgtcgaca ttgactgatg
     2461 ccaataagcg atggcgagtg aaaaaatccg ctttttgttc aagctgatga agttgttctt
     2521 ttactacgtc aatgcggtgt cgaaccgcta attccgcgaa ataacgatcc ggggcaatac
     2581 gtctggaagg gttatcagga tgggtgacgg cagtgagaag ttcaaccgtc atcagacggc
     2641 catccgtctg gtatatcggc tggtaagtat aggcacgctc gcattgcagc caatagcgcc
     2701 gttcctgcaa attctctata cctgcatcag gaacgcgtag ctgctggata acctgcttta
     2761 tcatctcagt tgtcctgtta atgggagtgt gacagtccgg actcgtcaaa ggttatcggc
     2821 gttcaggcag agaactttac cctcggtccc tggcaaaata aaaacagacc acgaaacttg
     2881 tcaaaaatac gcacttgctc aaaaaaataa tggaccgatg ttttaatatt attgaccgct
     2941 aaacatccac agcgcacact aacgctaatt tttacagatc aggttcacga ctatgtctaa
     3001 aaagattgcc gtgattggcg aatgcatgat tgagctgtcg cagaaaggcg ctgatgttca
     3061 gcgcggcttc ggcggcgaca cgctgaatac ctccgtttat attgcccgtc aggtcgattc
     3121 tgccgctctg gccgttcact atgtaacggc gctgggtacc gacagtttca gccaacagat
     3181 gctggaggcg tggcagcatg aaaatgtgga tacctcgcta acgcagcgga tggaaaatcg
     3241 cctgccaggc ctctattaca tcgaaaccga tgacactggc gagcgtacct tctactactg
     3301 gcgtaacgaa gcggcagcga aattctggct ggagagcgag cagtcagcgg ctatctgcga
     3361 gacgctggcg accttcgatt atctctacct gagcggcatt agcctcgcga ttttaagccc
     3421 gaccagccgt gataagctgc tgtctttatt gcgtgaatgc cgggccaacg gcgggaaagt
     3481 catttttgat aataactatc gcccgcgttt atggacaagt cgcgaagaaa cgcagcaggt
     3541 ctatcaaaag atgctggaat gtactgatat cgccttcctg acactggacg atgaagacgc
     3601 gctatggggt aagcaaccgg tggaagaggt cattgctcgc acccatgcgg caggcgtaca
     3661 ggaagtggtg gtaaaacgcg gggcggactc ttgcctggtc tcgattcagg gcgaggcgct
     3721 cattgacgtt ccggcagtaa aactgccgaa agagaaagtg atagacacca ctgccgcagg
     3781 cgactccttc agcgccggtt atctggccgt tcgtttgacg ggcggcagcg cgacggatgc
     3841 cgcgaagcgc ggacacctga cggccagcac ggtgattcag taccgtgggg ccattattcc
     3901 gcacgacgcg atgccgcagt aagtcattcg ttcttgcccg gtggcgctgc gcttaccggg
     3961 ccgacaggcg gccgcttact gtgccgccgg tgtttccgtc acttccggat gcgcctcatc
     4021 tgcttcaaca gcggcggcag ttgccggaac catgatttca tcccacgtcg cctttaacgc
     4081 cttcatatta aattccggct cgccttgcgg ttgcagcaaa attaatgcca tctcctgcga
     4141 tagctgctga cgtagattct gattgagcat atcgacggtc aggctgttga ggaaattctg
     4201 acgcagcttc tgatactgct ccggcgcgat atccaccacc tgattctgca gcgagcgcat
     4261 acgctgtcca gtcaaaatgt cagtatcggt acgcgcgtag gtcgcgaata gcttttgcaa
     4321 ttcgagattt ttctgcgcca ccagcgcagt aaactcctct tccgacaaac ctttatcgcg
     4381 tactttcgcc agttcattcg ccaccaggct caaattggta ttgagcttat cattaggtga
     4441 ttcaatgttg atggcgcact gcgcgcgcag gaacagaacc cggcagtcaa accccagacc
     4501 aatatctttc gcgttatttt tagtaagctc ttgctggata tgccagaaca gcgcttcgcg
     4561 cgccagatcc gcctgccagt agcgcaacag cgccgccgac tcgcgaatcg gttgccacgg
     4621 cgtatcccac ataatggaga gacgatcctg gcgcaccgca tcggtcataa tgctcactga
     4681 ttccgcccgc agcggcgaaa gcgtcggcac cggggcgggc gtttcgcgtt tacctttcag
     4741 cgtaccgaac gttttattga tctgctcggc gacggagcgc gcatcaatgt tgccgacaac
     4801 aatcagcgtc atggcatccg gggtgtacca tttttcatag aaagcctgaa ttttggctgc
     4861 gtctaccggc tgctttaacg gttccgcggg atcgtgcccc aataacgccg atcctttcag
     4921 ccgataacgc caccagccct ctttagtatc tgctggccac gtcgcaacca tatcttcgct
     4981 gcttaacgca tgattcaccg tctctggcgt aatggttaat ttaccggaga cgttagccag
     5041 ataggtcagc gcttctttca gcagatcgtt acggttattg ggtaaactga ggctatagag
     5101 cgtggaatca taagaaacaa taacgggcgg catgggacgt ttcggatcaa atccttgctg
     5161 ccataaagaa cgtgcctgtg cggcatccag accaccgctt tgcgtcagcg cgatacgggg
     5221 aatcgcatgg ctaaacccgc tctgttgcgt actttcggtg agcgaaccgg tattaacctg
     5281 tagacgaact tcaatacgat cgctggggcg ctgaggcgta gccaacactt gccactgtaa
     5341 cccattagcc agcgtcccct gttgccatgc cggatcgggc tggagcgcat ctgcctgcac
     5401 atagccggca gaggccaaca tcaacagact gcccgctaag agtcgaattt ttgtgccctg
     5461 catgtgaacc cctgatcaac aatcctggta ataaaaagac agccccggca gggatgcctg
     5521 aatatgacgt aaaaacactt cgtgttagac cgcgagaacc taaaaatgtc acggaagaag
     5581 tgaaataatc cctaagcatc atgctgtatg ctttgggcgc aggggtcaat tatgcgcaaa
     5641 cacccgcagt cctggaaggg actacgggca taagtggcga gattaggagg aaatttcgtg
     5701 cgttttgcca tccggcgcac gattattaag cacatcgtcc agcttttggt gatctaactc
     5761 tttcacccat ttggcaacca ccaccgtcgc cacgccgtta cccaccaggt tagtcagcgc
     5821 gcgcgcttcg gacataaagc ggtcgatacc gaggattaac gccagtcccg ccaccggcaa
     5881 atgacctacg gcggagatag tggccgccag cacgataaag ccgcttccgg tcacgcccgc
     5941 ggcgcctttt gacgatagca gcagcacgac cagcaacgtg atctggtgga agatatccat
     6001 atggctgttg gtcgcctggg cgataaacac cgccgccatc gtcaggtaga tagaggtgcc
     6061 atcaaggttg aacgaatacc ccgtcgggat caccagcccc accaccgatt tacggcaccc
     6121 cagtttttcc atcttatcga gcatacgcgg caacgctgac tcggaagagg aggtgccgag
     6181 cacaatgagt aattcttccc ggatatagcg aataaattta aaaatgctaa agcccgttac
     6241 ccgtgcaatc gtccccagca ccaccaccac gaagagaata caggtgatat agaagcagat
     6301 aatgagctgc cccagttgca ccagagaacc gacgccgtat ttaccgatgg tgaaggccat
     6361 cgcgccgaat gcgccaatcg gcgccaggcg catgatcata ttgatgatgc cgaaaatgac
     6421 ctgcgaaaaa ctctcaatca cattgaaaat gagctggcct ttgctgccca aacggtgcag
     6481 cgcaaaacca aacaacaccg caaacagtaa gacctgcaga atgttgccgc tggcaaacgc
     6541 gccgatcacg ctgcccggta tgacatccat caggaaggca ataatgccct gctccttggc
     6601 ttgtgcggca taaacggcca ccgcctgcgc atccagcgtt gccggatcga cgttcatccc
     6661 ggcgccaggt tgcacaacgt tgacgatgat aagaccgtta atcagcgcaa tcgtactgac
     6721 aatttcaaag taaagcagcg cgaccgcgcc ggtacgcccc accgctttca tgctttccat
     6781 gcctgcgatg cccgtcacga cagtacagaa aatgacagga gcgatgatca tcttaatgag
     6841 cttaacgaac gcgtcgccaa gcggtttcat ttgtgcgccc agttcaggat agtaatggcc
     6901 aaggagaata ccaatggcga ttgctgtcag gacctgaaaa taaagacttt tgaacagaga
     6961 ggttttcata gggtgtcctt gaagtaaaaa ccacaggtct tgtaaggtta tgagtaacct
     7021 gcggccttaa aataacaccc acacaacatg acagaaatgc gccaggatca taattgaaac
     7081 aaaaatgtta aaaagtttga gctgactcgc acaagcgcga ccttttttaa cttttgtaat
     7141 caggattttc gtgcgacaga taccgttctt caaagatatc cgcgggaacg ggccgagcaa
     7201 acaggaagcc ttgcgcgacg ttgactcccg cctgttccag ccacgcgcgt tgcgcctcgt
     7261 cctccacgcc ctcggcaatc aattgtaaat taagactgcg ggccatcagg ataatcgccg
     7321 tcaccatact gtgatcatcc ggtaacccat cgacaaacat tttatcaatt ttaaggatat
     7381 cgaccggtag cgacttcata tgctgtaact ggcgcagccc cgcgtaaccc atgccaaaat
     7441 catccagtgc gatacgcacg ccagcattac gtaacggacg taagatagcg acggcagcgt
     7501 gcggatcgtc gatacggcgg ctttcagtga cctcaagaat cagcgtaccc ggttgaatac
     7561 gatagcggtt taacaattcc agcagatccg acaccatgcc agggtgcatg agctgtaacg
     7621 cggaaagatt gacggagagc ggcaatgtca cgccgcgctc ctgccaggcg gcaagctggc
     7681 ggcaggactc ttccagcacc caatggccca ccgtgaccat caggccgcag gattcaatgc
     7741 gctcaatcag cccctccggc aattcccagc taccgtccgg ctgctgcata cgtaacaagg
     7801 cttcggcgct taatacgttg ccgctgcgca tctcgacctg cggctgcagc caaatggcaa
     7861 actgatggtt atccagcgcg gtaaggatat cgctctcttc ggtaaggcgc tgttgagcgg
     7921 cctccatctg cgccgggtca aagaactgga tctgattttt accttttcgg cgcgcggtaa
     7981 acgcggcgga gacggcgcga ccatagagcg cttcggcggt cagatcgcca taatacatcg
     8041 caatgccaat actgcagctt gggcgcagtt gaataccctg gatgggcagt cgttcattaa
     8101 tgatagtgag tatttgctga cctaatgtga tggcgtgcca cggctctttg acgccgtggg
     8161 cgataatggc aaagtcatac ccgctgacct gcgtaagcac catgcgcggc gccagcaccg
     8221 acttcagctt ctcaaccagc gtcagtaata gaatctcccg ctgcgtttct tgcagcacgc
     8281 ctgccgtgtc acgcaacgtt tcgcacgtca cgatgataag cgcggtggtc tgttggcggg
     8341 tgataacctg ttccagcagc gccattaaaa aggctttatt gggcaactcg gaaaccggaa
     8401 aacgcatcgc gttgtccgtt tgctcctcgc gttgacgctg cataagctgc tggttgaggt
     8461 tatagctgcg caccagcatc ccaatttcat catcctgatg cagacgcggc aacgccagct
     8521 gatgtccgat cagctcctgc tgcggaatgt cgttcagctc gcgggcgatt ttgcgcagcg
     8581 gatgcacaat caggcggttt acgcaccagg cgatggccac cgtcaggatc agcgataaaa
     8641 gtaagtaaat ggtcactaac gtagagagcg cgctcatgac gaacttgtac atacggtacg
     8701 aatccgcctg caatacaagg taggccagcg gttgcggatt ggcgggacgc tccagcgaat
     8761 aaaccggcaa agaaatttgt accggcagtt cgaagagacg cgtcaccata accgggacgg
     8821 ggcgttcagg aatgaagcgc ttacgcaacg cctggaactg attcggcaat accacatcgg
     8881 cgcgactcac cacgcccgca ggtttaatac tttccagaat ggtttccgcg ccggggagat
     8941 ccgcttttaa aatcgcggaa gaaagaggtt cccgaacaga gcgcgcgatg ctttccagtt
     9001 gcgtagccgt gttgtagcgg ttctgctgta ccagatggaa caacaaaacg gtgcaaaaga
     9061 caaaaacaaa caccatgaca acggccgcaa ccattgccat ctgtttaatt gttaacgagc
     9121 ggctgacgcg caaattgact ctccctggat atcccggact gccgcctgag tatacccgat
     9181 tgcagcggca ttaagagagg ctgtatctga aaaggacttt tctgaataac ggttaatgat
     9241 agcgtctgat ggcgctgcgc ttctcaggcc tacgacgcct gtcaatacgt aggcctgacg
     9301 caatgattac cagtcagcgt aaggcaccag aggctgcggc ggtaaatcca tatccccctg
     9361 ccagcctgcc gcggaataac ggacatacag cagcagatga ctgggggtat aatctttcgc
     9421 ctgctaaata tcgacagccg tacccacaaa ccagttggca gtgacccggc gttcaatgag
     9481 cgcccgcgcg gtatagccaa atccctgact gctgccgccg ccgttggtct ggtcacgcgc
     9541 atcctcctga taatccgccg gaatcaaatt catcagcgga taacgcggca tggtacggtt
     9601 gccgggagtg cgaccaggat accgagccgc ctaactccca cgaccagttt tccgtacgct
     9661 gccgccacat caccggcacc gcaaacgaca ggtattcctg cgggctataa taaccgccct
     9721 gacccagtga ataaccgctc agatctttgt cgtaatgcca gatcatgtta ttcagcccga
     9781 cggtaacgcg gcggttattc tcgttaatca ccttatagta ataaccggtc atccagcgca
     9841 cgcgccagtt atcttccaca tttttaccgc tcaactggtc gccgctgagc gacgcccaga
     9901 caccgtttgc ttcgccttta tcatagctga gactgacgcc gccgccgttg gcccgcacgc
     9961 cgccccattt ggtgccggta ttgctgctgg cgtccttttg cccgccaaac gccagcagcg
    10021 agctggagat cgggcgacga tgcgcgttca gggtataacc caacggcccg atatcgtcgc
    10081 tatagctgac gccgccgacc acatcaacga cattaaagcc catcggcgtc gtgccgatat
    10141 cccagcgcca ggtctcattc tgccagccga ccgccacgct cgcgcccgta tcggcctggc
    10201 tacgatgtcc gctgcatttc tccagcgtac aggtacccca gttattatcg tatttcccat
    10261 ctgcatccgt agagaagcga ccaacatcca tattcaccat atcagtacga aagaacgccc
    10321 gtccgtccga ccagggcgca tccacctgaa gcatcgtggt atgcgccttc agatcggagt
    10381 agccgccagt cccgctcgac ccccaataat cgtgcgccaa cgtgacattg agatcctgct
    10441 gacggtacaa ctccgccgca tcgctacgca cgccgcgttt tagccagtca tctttttcat
    10501 cattgcgcgt caggcgggta aaggtatcgt tatcctgggg gcgaaccggc gtaatcgccg
    10561 cggcgaccat tgcctctttg taggtctcca gcgcccgctg cggctcgccc gtttgcgcct
    10621 gaaaagcggc ggcgtcacgc aataccatcg cgctttccat tgatggcggc tgtgcttttg
    10681 cctgcggcgt aatgcggtta aagatccgcg ccgccgccgt gatatcgcca ag
//
LOCUS       DAGWFR010000138        10690 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.140, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000138 DAGWFR010000000
VERSION     DAGWFR010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 10690)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10690)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10690
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.140"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..550)
                     /locus_tag="MOX77_003499"
     CDS             complement(<1..550)
                     /locus_tag="MOX77_003499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-ribosomal peptide synthetase"
                     /protein_id="HCA3358931.1"
                     /translation="MTQRLPLVAAQPGIWMAEKLSDLPSAWSVAHYVELNGELDAPLL
                     AKAVAVGMQQADTLRMRFTEENGEVWQWIDPEHTFGEPPIADLRDQPDPHLAALALMQ
                     ADLRQNLRADSGKPLAFHQLIRIDDTRWYWYQRYHHLLVDGFSFPAITRQIAAIYRAW
                     QSDAPTPESPFTPFVDVVEEYQR"
     gene            complement(547..765)
                     /locus_tag="MOX77_003500"
     CDS             complement(547..765)
                     /locus_tag="MOX77_003500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MbtH family protein"
                     /protein_id="HCA3358932.1"
                     /translation="MEFSNPFDNPQGQFYILQNAQRQFSLWPAACALPAGWGVVCEPQ
                     SQDACQQWLNTRWTTLNPAHYADKQEAK"
     gene            complement(796..2010)
                     /gene="fes"
                     /locus_tag="MOX77_003501"
     CDS             complement(796..2010)
                     /gene="fes"
                     /locus_tag="MOX77_003501"
                     /EC_number="3.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterochelin esterase"
                     /protein_id="HCA3358933.1"
                     /translation="MKEALATGSEAWWRTKTGPEWIREKDGNYRVTFWWRDPQGNETH
                     SPIRRVWVYITGVTDHHQNAQPQTMARIAGTDVWRWSTALSANWRGSYCFIPTERDDV
                     FAAFAPGETPDRNALREGWRQLLPQAIADPLNSQSWRGGRGHAVSALEMPDAPRQPGW
                     DRPETSYSPPLMMQWHSERLGNSRRVWILTTGDEATEERPLAILLDGQFWAENMPVWP
                     ALASLTHQRLLPGAVYLLIDAIDTQHRNQELPCNADFWLAVQQELLPQVRAVTPFSDD
                     AGRTVVAGQSFGGLSALYAGLNWPTRFGCVLSQSGSFWWPHRITPPEGEVITRLKTGA
                     LCARGLRIVLEAGVREPIVFQANQALYAQLNTSQQSIFWRQVDGGHDALCWRGGLTQG
                     LMLLWQPLIDTL"
     gene            2199..4454
                     /locus_tag="MOX77_003502"
     CDS             2199..4454
                     /locus_tag="MOX77_003502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HCA3358934.1"
                     /translation="MNKKIHSLTLLVNLGIYGAALPVMAEEKTDSAALTNEDTIVVTA
                     AQQNLQAPGVSTITADEIRKNPPARDVSEIIRTMPGVNLTGNSTSGQRGNNRQIDIRG
                     MGPENTLILIDGKPVTSRNSVRLGWRGERDTRGDTAWVPPEMIERIEVLRGPAAARYG
                     NGAAGGVVNIITKKGGSEWHGSWNTYFNAPEHKDEGATKRTNFSLNGPLGGDFSFRLY
                     GNLDKTQADARNINQGHQSERTGSYADTLPAGREGVINKDINGVVRWDFAPLQSLELE
                     AGYSRQGNLYAGDTQNTNTNQLVKDNYGKETNRLYRQNYSLTWNGGWDNGVTTSNWVQ
                     YEHTRNSRMPEGLAGGTEGIFDPKASQKYADADLNDVTLHSEVSLPFDLLVNQNLTLG
                     TEWAQQRMKDQLSNSQTFMGGNIPGYSSTNRSPYSKAEIFSLFAENNMELTDSTMLTP
                     GIRFDHHSIVGDNWSPSLNLSQGLGDDFTLKMGIARAYKAPSLYQTNPNYILYSKGQG
                     CYATGAGTGIGCYMMGNDDLKAETSINKEIGLEFKRDGWLAGVTWFRNDYRNKIEAGT
                     VPLQRINNGKTDVYQWENVPKAVVEGLEGTLNVPVSDTVNWTNNVTYMLQSKNKETGE
                     RLSIIPQYTLNSTLSWQVRQDVSLQSTFTWYGKQEPKKYDYQGNPVTGTDKQAVSPYS
                     IVGLSATWDVTKNVSLTGGVDNLFDKRLWREGNAQTVRDTQTGAYMAGAGAYTYNEPG
                     RTWYMSINTHF"
     gene            4501..5205
                     /gene="entD"
                     /locus_tag="MOX77_003503"
     CDS             4501..5205
                     /gene="entD"
                     /locus_tag="MOX77_003503"
                     /EC_number="6.3.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterobactin synthase subunit EntD"
                     /protein_id="HCA3358935.1"
                     /translation="MLTSHFPLPFAGHRLHIVDFDASSFHEHDLLWLPHHDRLRSAGR
                     KRKAEHLAGRIAAVHALREVGVRAVPGIGDKRQPLWPDGLFGSISHCASTALAVISRQ
                     RVGVDIEKIMSQHTATELAPSIIDSDERQILQASSLPFPLALTLAFSAKESVYKAFSD
                     RVTLPGFDSAKITSLNATHISLHLLPAFAAMMAERTVRTEWFQRGNSVITLVSAITRF
                     PHDRSAPASILSAIPR"
     gene            5217..6335
                     /locus_tag="MOX77_003504"
     CDS             5217..6335
                     /locus_tag="MOX77_003504"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HCA3358936.1"
                     /translation="MALNDFHVSEPYTLGIELEMQVINPPGYDLSQDSSTLIDAVKPQ
                     LTAGEIKHDITESMLEMATGVCRDIDQVAAQLSAMQHVILQAASEHHLGICGGGTHPF
                     QKWQRQEVCDNERYQRTLENFGYLIQQATVFGQHVHVGCANGDDAIYLLHGLSHFVPH
                     FIALSAASPYMQGSDTRFACARLNIFSAFPDNGPMPWVSNWQEFAGLFRRLSYTTMID
                     SIKDLHWDIRPSPAFGTVEVRVMDTPLTLDHAINMAGLIQATAHWLLTERPFKPQEQD
                     YLLYKFNRFQACRYGLEGVLTDVYTGDRRRLADDTLRLLDNVTPSARKLGADSAIDAL
                     RLQVKKGGNEAQYMREFIADGGSLIGLVQKHCEIWAGQ"
     gene            6402..6650
                     /locus_tag="MOX77_003505"
     CDS             6402..6650
                     /locus_tag="MOX77_003505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1158 family protein"
                     /protein_id="HCA3358937.1"
                     /translation="MKHPLESLMTAAGILLMALLSSLLLPAPSLGLALAQKLVGIFHL
                     MDLNQLYTLLFCLWFLLLGTLEYYVIRFIWRRWFSLAD"
     gene            complement(6656..6997)
                     /locus_tag="MOX77_003506"
     CDS             complement(6656..6997)
                     /locus_tag="MOX77_003506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RamA family antibiotic efflux transcriptional
                     regulator"
                     /protein_id="HCA3358938.1"
                     /translation="MTISAQVIDTIVEWIDDNLNQPLRIDDIARHAGYSKWHLQRLFM
                     QYKGESLRRYVRERKLKLAARDLRDTDQKVYDICLKYGFDSQQTFTRIFTRTFNLPPG
                     AYRKEKHGRTH"
     gene            7286..7867
                     /locus_tag="MOX77_003507"
     CDS             7286..7867
                     /locus_tag="MOX77_003507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HCA3358939.1"
                     /translation="MARPKSEDKKQALLEAATQAIAQSGIAASTAVIARNAGIAEGTL
                     FRYFATKDELINTLYLHLKQNLCQSMIMELDRSITDAKTMTRFIWNSYISWGLNHPAR
                     HRAIRQLAVSEKITKETEQRADDMFPELRDLCHRSVLMVFMSDEYRAFGDGLFLALAE
                     TTMDFAARDPARAGEYIALGFEAMWRALTREEQ"
     gene            7867..8235
                     /locus_tag="MOX77_003508"
     CDS             7867..8235
                     /locus_tag="MOX77_003508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HCA3358940.1"
                     /translation="MDGQTLHACAKRFALELPFTEHCWPFGPQYDVFKVGGKIFMLFT
                     EHHCRPVVNLKSAPQKSLVNQQIYPSIAPGYHMNKKHWISVYAGEDITVSLLNDLIND
                     SWNLVVDGLPKREQLRLRPR"
     gene            8332..8985
                     /gene="nfsB"
                     /locus_tag="MOX77_003509"
     CDS             8332..8985
                     /gene="nfsB"
                     /locus_tag="MOX77_003509"
                     /EC_number="1.5.1.34"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-insensitive NAD(P)H nitroreductase"
                     /protein_id="HCA3358941.1"
                     /translation="MDIVSVALKRYSTKAFDPSKKLTAEEADKVKTLLQYSPSSTNSQ
                     PWHFIVASTEEGKARVAKSAAGNYTFNERKMLDASHVVVFCAKTAMDDAWLQRVVDQE
                     DADGRFATPEAKAANDKGRRFFADMHRVSLKDDHQWMAKQVYLNVGNFLLGVAAMGLD
                     AVPIEGFDAEVLDAEFGLKEKGYTSLVVVPVGHHSIEDFNAGLPKSRLPLETTLTEV"
     gene            9185..9310
                     /locus_tag="MOX77_003510"
                     /pseudo
     CDS             9185..9310
                     /locus_tag="MOX77_003510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459569.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose transporter subunit IIAB"
     gene            complement(9340..>10690)
                     /locus_tag="MOX77_003511"
     CDS             complement(9340..>10690)
                     /locus_tag="MOX77_003511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="autotransporter domain-containing protein"
                     /protein_id="HCA3358942.1"
                     /translation="SRQQAIRKALLAAAATVSSNPFIQQLLVEQLLAGYEKVAEQASA
                     LTDYYNQMEEKGLEQHGGNIARADINGLFKEILANPQAFGLTNTVGMACPPGVSASVC
                     SSAMPGFNASQDYLFADHLHPGPQVHTIIAQYIQSIIAAPVQATYLNQSVQSMAQGSR
                     TTLDSRYQQLRQGENPVGSLGMFGGYSGGYQRYDNNEADGNGNHNNLTVGVDYQLNEQ
                     VLLGGLIAGSLDKQHPDDNYRYDARGFQAAVFSHLRAGQAWLDGDLHYLSAKFSNIQR
                     SITLGALRRVEEGETNGRLWGARLTSGYDFVMMPWLTTGPMLQYAWDYSHVNGYSEKL
                     NTSTSMRFGDQNAHSQMGSVGWRLDLRHSIIHSWAQINYRRQFGDDTYVANGGLKSTA
                     LTFSRAGKAQDKNWVDIAIGADFPLSATVSAFAGLAQTAGLSDGNQTRYNVGFSARF"
BASE COUNT         2530 a         2990 c         2770 g         2400 t
ORIGIN      
        1 agcgctgata ttcctcaacc acatccacaa agggggtaaa aggcgactcc ggcgtagggg
       61 cgtcgctctg ccaggcgcga taaatcgccg caatctggcg agttatcgcc gggaagctaa
      121 agccatccac cagcaaatgg tgatagcgct gataccaata ccagcgggta tcatcaatgc
      181 ggattaactg gtgaaacgcc agcggcttac cgctatctgc gcgcaggttt tgccgtaaat
      241 ccgcctgcat taacgccagc gccgcgagat gcggatcggg ctggtcgcgt aaatcggcaa
      301 tcgggggttc gccgaaggtg tgctcaggat ctatccattg ccagacctcg ccgttctctt
      361 cggtaaaacg catccgtagc gtatccgcct gttgcatccc taccgctacc gcttttgcca
      421 gcaagggggc atccagctcg ccattcagtt ccacatagtg cgccacgctc caggcggagg
      481 gtaaatcaga gagtttttcc gccatccaga tccccggctg ggcggcgact aacggtaaac
      541 gctgcgtcat ttcgcctcct gcttatcggc ataatgcgcc ggattcagtg ttgtccagcg
      601 cgtattaagc cactgctggc acgcgtcctg cgattgcggt tcgcatacca cgccccatcc
      661 tgcgggaagc gcgcacgccg ctggccaaag gctgaattga cgctgcgcat tttgcaggat
      721 gtaaaactgt ccctgcggat tatcgaaggg attactgaat tccatactca actcctgtca
      781 tggacatgtg cccggttaaa gcgtgtcgat aagcggctgc caaagcagca tcagcccttg
      841 cgttagcccg ccgcgccagc aaagcgcatc gtgtccgccg tcaacctgac gccagaaaat
      901 ggactgctgc gaggtattca gttgggcata aagcgcctga tttgcctgaa acacgatcgg
      961 ctcacgcacg ccggcttcca gtacgatacg cagtccgcgc gcgcacaatg cgccggtttt
     1021 cagccgggta atgacttccc cctccggcgg ggtgatgcga tggggccacc agaacgatcc
     1081 tgactggctt agtacacagc caaaacgcgt cggccagttc aggccggcat acagcgccga
     1141 caggccacca aagctctgtc cggcgaccac cgttcgtccg gcatcatcgc taaaaggcgt
     1201 cacggctctg acttgcggca acagttcctg ctgcaccgcc agccagaagt cggcattgca
     1261 gggcaactcc tggttgcggt gttgagtatc aatcgcgtca atcagcagat agacggcacc
     1321 gggaagcagg cgttgatgag tcagcgaggc gagcgcgggc cagacgggca tattttccgc
     1381 ccagaattga ccgtccagca gaatagccaa cggtctttcc tccgtcgcct cgtctccggt
     1441 cgtcaatatc catacgcggc gggagttacc cagacgttcg ctatgccact gcatcatcaa
     1501 aggcggtgag tacgacgttt caggacgatc ccatcccggc tgacggggcg catccggcat
     1561 ttccagcgct gaaaccgcat gaccacgtcc tccccgccag ctttgcgaat taagcgggtc
     1621 ggcaatcgcc tgcggtaata gctgtcgcca gccttcacgc agcgcgttcc gatcgggcgt
     1681 ttcgcccggc gcaaaagcgg caaaaacgtc atctcgctcg gtaggaataa aacagtagct
     1741 gccgcgccag ttagcgctaa gcgccgtgct ccagcgccag acatccgttc cggcaatacg
     1801 cgccatcgtc tgaggctgcg cgttttgatg atgatcggtt acgccagtga tgtagaccca
     1861 gacacgccgt atcggggagt gtgtttcgtt tccctgcggg tcgcgccacc aaaaagtgac
     1921 ccgataattt ccgtcttttt cccgtatcca ttccggcccg gttttcgtcc tccaccaggc
     1981 ctcacttccc gttgccagcg cctctttcat tataaccctg tgtttattat gaattttgta
     2041 tataaaaggt gaaatatatt gataatatta ttgataacta tttgcatttg caatagcgta
     2101 ttgtagcgct atgggacgcg cgaacacaat ttcaccaccc ggccaatgcc tttgacgggc
     2161 gctttggctt atgtggctaa agaaaagcag gatatacaat gaacaagaag attcattccc
     2221 tgaccttact ggtcaattta gggatttacg gggccgctct gcccgtgatg gcggaagaaa
     2281 aaaccgatag cgctgcgctc accaatgaag acaccatcgt ggtgaccgct gcccagcaaa
     2341 acctacaggc gccaggcgta tccaccatca ccgccgatga gatccgcaaa aatccgcccg
     2401 cgcgcgacgt gtcagaaatc atccgcacca tgccgggcgt aaacctgacc ggcaactcca
     2461 ccagcggtca gcgcgggaat aaccgccaaa tcgatattcg cggcatgggg ccggaaaaca
     2521 cccttatcct gatagacggt aaacccgtta ccagccgtaa ctcggtacgc ctgggctggc
     2581 gcggcgaacg cgatacccgc ggcgataccg cgtgggtgcc gccagagatg atcgaacgca
     2641 ttgaagtgct gcgtggccct gccgccgcac gttacggtaa cggcgcggcg ggtggcgtgg
     2701 tcaatatcat taccaaaaaa ggcggtagcg agtggcacgg ttcctggaat acctatttca
     2761 acgcgccgga acataaagac gaaggcgcga ccaaacgcac taactttagc ctgaacggcc
     2821 cgctgggcgg ggatttcagc ttccgtctgt atggcaacct cgacaaaacg caggcggatg
     2881 cgcgtaatat taaccagggg catcagtctg aacgtaccgg gagttacgcc gacacgttac
     2941 cagccggacg cgagggggtc attaacaaag atatcaacgg cgtggttcgt tgggattttg
     3001 ctccgcttca gtctctggag ctggaggccg gttacagtcg ccagggcaac ctctatgccg
     3061 gcgatactca gaacaccaat acgaaccaac tggtgaaaga taattacgga aaagagacga
     3121 accgcctcta tcggcagaac tactctctga cctggaacgg cggctgggat aatggcgtaa
     3181 ccaccagtaa ctgggtgcaa tacgaacata cccgtaactc ccggatgccg gaaggcctgg
     3241 caggcggcac cgaagggatt ttcgatccca aagcatcgca aaaatatgcc gatgccgatt
     3301 tgaatgacgt caccctacac agcgaagtga gccttccttt cgatctgctg gtcaatcaaa
     3361 acctgacgct gggtaccgaa tgggcccaac agcgtatgaa agaccagctc tccaactcgc
     3421 aaacctttat ggggggaaat atcccgggtt acagcagtac caatcgtagc ccctattcaa
     3481 aagcggaaat tttctctctg tttgctgaaa acaacatgga actgaccgac agcaccatgc
     3541 tgacgccggg gatacgtttc gatcatcaca gtattgtggg ggataactgg agcccgtcgc
     3601 tgaacctgtc gcaaggtctg ggggatgact ttaccctgaa aatggggatc gcccgcgctt
     3661 ataaagcccc gagtctgtac cagactaacc caaactatat tttgtacagt aaaggtcagg
     3721 gttgctacgc gactggcgcg ggtaccggca tcggctgcta tatgatgggt aacgatgatc
     3781 tgaaagccga aaccagcatc aataaagaga tcggtctgga atttaaacgc gatggctggc
     3841 tggccggcgt cacctggttc cgcaatgatt accgcaataa gattgaagcg ggtacggtgc
     3901 cgttgcagcg tatcaataac ggcaaaacgg atgtctatca gtgggagaac gtgccgaaag
     3961 cggtcgttga aggtctggaa ggcacgttaa acgtaccggt tagcgacacc gtcaactgga
     4021 cgaataacgt tacgtatatg ctgcagagta aaaacaaaga gaccggcgaa cgcctgtcga
     4081 ttattccaca gtacacgctt aactctaccc tgagctggca ggtacgtcag gacgtttctc
     4141 tgcaatcgac cttcacctgg tacggcaaac aagagccgaa gaaatatgat tatcagggta
     4201 accccgttac cggaacagat aagcaagcgg tcagcccata cagtattgtt ggcctgagcg
     4261 cgacctggga cgtgaccaaa aatgtcagcc tgaccggtgg cgtggataac ctctttgaca
     4321 aacgtctgtg gcgtgaaggt aacgcgcaaa ccgtcaggga tacgcaaact ggcgcttata
     4381 tggcgggcgc tggcgcgtac acctataacg aaccgggacg tacgtggtat atgagcatta
     4441 atacccattt ctgatggcaa ccttccctcc ctcattcggg gagggaatta gcaaaagacg
     4501 atgctgacat ctcattttcc ccttcccttt gccggacaca ggctgcatat cgtcgacttt
     4561 gatgcgagca gctttcacga acacgacctg ctatggctgc ctcatcacga tcggctccgg
     4621 tctgccggac gcaagcgtaa agctgaacat ctggcaggcc gcatcgctgc cgttcatgcg
     4681 ctacgcgagg tgggcgtcag ggcggtgccc ggtattggcg acaagcgaca gccgctatgg
     4741 ccggacggcc tatttggcag catcagccac tgtgcgtcaa cggcgctggc cgtcatatcc
     4801 cgacagcgtg tcggcgttga tatagaaaaa atcatgagtc agcacacggc gacagagctg
     4861 gcgccgtcca ttattgatag cgatgagcgc caaattctcc aggcgagctc gctccctttt
     4921 ccgcttgccc tgacgctggc tttctccgcc aaagagagcg tttataaagc cttttcagac
     4981 cgcgtcacgc tcccgggatt cgatagcgca aaaattacct cgcttaacgc cacgcacatc
     5041 tcgttacatc tgctgccagc ctttgccgcc atgatggctg aacgtaccgt ccgtacagaa
     5101 tggtttcaac gtggcaatag cgttattact ctagtttctg caataacgcg ctttccccac
     5161 gacaggagcg ctcccgcttc tatacttagc gcaatacccc gataaatgag atcgctatgg
     5221 cgctgaatga ttttcacgtt tctgaacctt atacgctcgg tattgagctg gagatgcagg
     5281 tgatcaatcc acctggctac gatttaagtc aggactcttc tacgctgatc gacgccgtta
     5341 agccccaact tactgcggga gaaattaagc acgatatcac cgaaagtatg ctggagatgg
     5401 ccacgggcgt ctgccgcgat attgaccagg tggcggccca actttctgcc atgcagcacg
     5461 ttattttaca ggcggcgtcg gaacaccatc tcggcatttg cggcggcggt acgcaccctt
     5521 ttcaaaaatg gcagcgtcag gaggtctgtg ataatgagcg ctatcaacgc acgctggaaa
     5581 atttcggcta cttaattcaa caggcgacgg ttttcggtca gcatgtccac gtcggctgcg
     5641 cgaacggcga cgatgcgatt tatcttttac acgggctgtc gcattttgtg ccgcacttta
     5701 ttgcgctctc cgccgcgtct ccctatatgc aaggatctga cacccgtttt gcctgcgcgc
     5761 gcctgaatat tttttccgct tttcccgata acgggcccat gccgtgggtc agtaactggc
     5821 aagagtttgc cggactattt cgtcgtctgt cttacaccac gatgatcgac agcatcaaag
     5881 atttgcactg ggatatccgc cccagcccgg cctttggcac ggttgaggtt cgggtgatgg
     5941 atacgccgct cactcttgat catgccatca atatggcagg attgattcag gcgaccgcgc
     6001 actggctgct gaccgagcgt ccctttaaac cgcaggaaca agactatctg ttatataaat
     6061 tcaaccgttt tcaggcttgc cgctatggtc tggagggcgt gctaaccgat gtctataccg
     6121 gcgaccgccg tcgcctggca gatgatacgc tgcgtctgct ggacaacgtt accccctctg
     6181 cgcgtaagct gggcgccgac agcgccattg acgcgctacg tttgcaggtg aaaaaaggcg
     6241 gtaacgaagc gcaatatatg cgggagttta ttgccgacgg cggatcgctg ataggcctgg
     6301 tacaaaaaca ttgtgaaatc tgggcgggac aatagacagc atatttgcct taccaggcga
     6361 tgtcccggac aatggcgttt taacttacgt ttaacaaagc catgaaacac ccgcttgaat
     6421 cattgatgac cgctgccggt attttgctga tggcgttgct ctccagcctg ctgctgcccg
     6481 ccccttcgct cggccttgcg ctggcgcaaa aactggtcgg gatctttcat cttatggatc
     6541 tcaaccagct ttatactttg ttgttttgtt tatggtttct gttgctcggc acgctggaat
     6601 attatgttat tcgctttatc tggcggcgct ggttttcgct ggccgattaa acatttcaat
     6661 gcgtacggcc atgcttttct ttacgataag cgcctggcgg caggttgaac gtgcgggtaa
     6721 aaatgcgcgt aaaggtttgc tgcgaatcaa aaccatactt gagacaaata tcatacacct
     6781 tctggtcggt gtcgcgcagg tcgcgcgccg ccagttttag cttccgttca cgcacgtagc
     6841 gcctcagact ctcccctttg tactgcataa aaaggcgctg caggtgccac ttggaatacc
     6901 ccgcatgacg ggcaatatca tcaatacgta acggctgatt caaattatca tcaatccact
     6961 cgacaatcgt gtcgataacc tgagcggaaa tggtcatcgt gctctcccct ctatcaaact
     7021 cgtcagcggc tcccgcaccg cacatttacg gcaacagcaa taagcatagt aataaccaca
     7081 caaattgtga gacggcttat cgcatggcct gcaatatgct tttctaccac ttcatgcggc
     7141 agcccttgat tatgagtgag taagcactca ttatagaaag caaagatacg ccgtcaaggt
     7201 acttttcaaa ggttgacatt caccgttgcg acgcgacaac gggcatgatt caatcatgtt
     7261 tttacagaca taagggtaac gtgtagtggc tcgtccgaag agtgaagaca aaaaacaagc
     7321 attactggaa gcggcaaccc aggcgatagc gcaatccggt atcgccgcct caacggcggt
     7381 gattgcgcgt aacgcaggta ttgcagaagg aacattattt cgctatttcg cgaccaaaga
     7441 tgagctgatt aacacgttgt atttgcattt aaagcagaac ctctgccagt caatgataat
     7501 ggagctggat cgatccatta ccgatgccaa aacgatgacc cgctttatct ggaacagtta
     7561 tatcagttgg ggtctgaacc atcccgcgcg ccatcgggcg atccgtcaac tggccgtcag
     7621 cgaaaagatc accaaagaga cggaacaacg ggccgacgat atgttccccg aattgcgcga
     7681 tttatgtcat cgttccgttt tgatggtatt tatgtcggat gagtaccgcg ccttcggcga
     7741 cggccttttt ctggcgctgg ctgaaacaac aatggatttc gccgcgcgcg atcccgctcg
     7801 cgctggcgaa tatattgcgc tgggattcga agccatgtgg cgcgcgctga ctcgcgagga
     7861 gcaataatgg acggtcaaac actgcacgcc tgtgcaaaac gctttgcgct ggaactgcct
     7921 tttaccgaac actgctggcc tttcggccca cagtacgatg tgtttaaagt cggcggcaaa
     7981 atattcatgc tgttcactga acatcactgt cgcccagtgg tgaacctgaa gtcggccccc
     8041 caaaaatccc tggtgaatca acaaatttac cccagcattg cgcctggcta tcacatgaat
     8101 aagaaacact ggatttcagt ctatgcgggc gaggatatca ccgtctcgct actcaacgat
     8161 ttgataaatg actcatggaa tctggtcgta gacgggctgc ctaaaagaga gcaactgcgc
     8221 ctgcgaccgc gctgatgcaa taaccgtttc cgcattttcc tcccttatct ttttaccgat
     8281 aacccggtac cctgctgata caaaagggta ctaaaccaac caggagcatt tatggatatc
     8341 gtttctgtcg ccttaaagcg ctactccact aaggcgttcg atcccagcaa aaaactgacc
     8401 gccgaagaag cggataaagt aaaaacacta ctacagtaca gcccctccag caccaattcc
     8461 cagccgtggc actttattgt cgccagtacg gaagaaggca aagcgcgtgt cgcaaaatcc
     8521 gctgccggaa actacacgtt caacgaacgc aaaatgctgg acgcctccca tgtggtggtc
     8581 ttctgcgcca aaaccgcaat ggatgacgca tggctgcaac gggtggtcga tcaggaagat
     8641 gctgatggcc gtttcgctac gccggaagct aaagcggcaa atgataaagg tcgccgcttt
     8701 ttcgctgata tgcaccgcgt ctcgctgaaa gatgaccacc agtggatggc gaagcaggtt
     8761 tatctgaacg tcggcaactt tctgctgggc gtcgccgcga tgggtctcga cgccgtcccc
     8821 attgaaggtt tcgacgccga ggtgctcgac gctgaatttg gtctgaaaga aaaaggctat
     8881 accagtctgg tcgtggtgcc agtcggccat catagcatcg aggatttcaa cgccgggctg
     8941 ccaaaatcac gtctgccgct tgaaaccaca ctgacggaag tctaatcccc tgcctaagcc
     9001 ggacgcccgt ccggcttttt tcacctttct gccaggttcc ccaatgatca atggcgcgaa
     9061 gtgccaggtt ttacatcgtt agtgttaact tcctctttca acctattgaa aataaatgat
     9121 atttaaaact ggcacgccgt ttgccatatc tggatacccc ctatctggat gaaggagaaa
     9181 acgggtgaga catgtttatg tagccagcca tggccctttt gcccgcggac ttattaacag
     9241 tctatcgctg ctgattggcg acgaacacgg cgtgacaccg gtttgcgcct acgatggcga
     9301 tattgtgtca ccacggggtt ggccctccct ggcgtgtcat caaaatcggg cgctaaaccc
     9361 aacgttataa cgggtttgat tgccatcgct taaccctgcc gtttgcgcca gcccggcgaa
     9421 agcggacact gttgccgaca gcggaaaatc tgcgccaatc gcgatatcaa cccagttttt
     9481 atcctgcgct ttcccggcac ggctaaacgt cagcgcggtc gatttaaggc cgccgttcgc
     9541 cacatacgta tcatcgccaa actgacggcg ataattaatc tgcgcccagg aatgaatgat
     9601 actgtggcga agatccagac gccaacccac gctgcccatc tgcgaatggg cgttttggtc
     9661 gccaaaacgc attgatgtac tggtattgag cttctcgcta taaccattaa cgtggctgta
     9721 atcccatgca tattgcagca tcggcccggt cgttaaccac ggcatcatga caaaatcata
     9781 accgctggtt aacctcgcgc cccacagccg accgttggtt tcgccctctt ccacccgtct
     9841 tagcgcaccg agcgtgatac tgcgctgaat gttactgaat ttagcggaca ggtagtgtaa
     9901 atcgccatcc agccacgcct gaccggcgcg taaatggctg aatacggcgg cctgaaaacc
     9961 gcgggcgtca taacgataat tatcgtcagg atgttgctta tccagagaac cggctatcag
    10021 ccctcccagc agtacctgct cgttaagctg ataatcgacg ccaaccgtca gattattatg
    10081 attaccgttc ccgtcggcct cattattatc ataacgttga tatcccccgc tgtatccgcc
    10141 gaacatgccc agtgaaccaa caggattttc cccctggcga agctgctgat aacggctgtc
    10201 aagcgtggta cgactgcctt gcgccatcga ctgaacgctt tggttcagat atgtcgcctg
    10261 taccggcgcg gcaatgatcg actgaatata ttgcgcaata atggtatgga cctgcggacc
    10321 gggatgtaaa tgatcggcaa acagatagtc ctgcgacgca ttaaatccag gcattgccga
    10381 ggagcacacc gaagcggata cgcccggcgg gcaggccatg cctacggtat ttgtcagacc
    10441 aaacgcctgc gggttggcaa gaatttcctt aaagaggccg ttgatatcgg cacgggctat
    10501 attgccgccg tgttgctcca gccccttctc ttccatctga ttataataat cggtcagagc
    10561 tgacgcctgc tctgccacct tttcatagcc cgccagcagt tgctcaacga gcagttgctg
    10621 aataaacgga ttgctgctta ccgttgcagc cgccgccagc aacgccttgc ggatcgcctg
    10681 ttgccgactg
//
LOCUS       DAGWFR010000139        10594 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.141, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000139 DAGWFR010000000
VERSION     DAGWFR010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 10594)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10594)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10594
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.141"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..253
                     /locus_tag="MOX77_003512"
     CDS             <1..253
                     /locus_tag="MOX77_003512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4115 domain-containing protein"
                     /protein_id="HCA3358943.1"
                     /translation="LVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKI
                     GAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEPTPAQ"
     gene            280..1398
                     /gene="ispG"
                     /locus_tag="MOX77_003513"
                     /gene_synonym="gcpE"
     CDS             280..1398
                     /gene="ispG"
                     /locus_tag="MOX77_003513"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HCA3358944.1"
                     /translation="MHNQAPIQRRKSTRIYVGNVPIGDGAPIAVQSMTNTRTTDVEAT
                     VNQIKALERVGADIVRVSVPTMDAAEAFKLIKQQVSVPLVADIHFDYRIALKVAEYGV
                     DCLRINPGNIGNEERIRMVVDCARDKNIPIRIGVNAGSLEKDLQEKYGEPTPQALLES
                     AMRHVDHLDRLNFDQFKVSVKASDVFLAVESYRLLAKQIDQPLHLGITEAGGARSGAV
                     KSAIGLGLLLSEGIGDTLRVSLAADPVEEIKVGFDILKSLRIRARGINFIACPTCSRQ
                     EFDVIGTVNALEQRLEDIITPMDVSIIGCVVNGPGEALVSTLGVTGGNKKSGLYEDGV
                     RKDRLDNDDMIAQLESRIRAKVSQLDEARRIDVLQVEK"
     gene            1509..2783
                     /gene="hisS"
                     /locus_tag="MOX77_003514"
     CDS             1509..2783
                     /gene="hisS"
                     /locus_tag="MOX77_003514"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HCA3358945.1"
                     /translation="MAKNIQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLP
                     IVEQTPLFKRAIGEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQE
                     QRLWYIGPMFRHERPQKGRYRQFHQLGAEVFGLQGPDIDAELIMLTARWWRALGISEH
                     VSLELNSIGSLEARANYRDALVAFLEQHQETLDEDCKRRMYTNPLRVLDSKNPDVQAL
                     LNDAPVLGDYLDDDSREHFAGLCKLLDAAGIAYTVNQRLVRGLDYYNRTVFEWVTNSL
                     GSQGTVCAGGRYDGLVEQLGGRATPAVGFAMGLERLVLLVQAVNPEFIASPVVDIYLV
                     AAGAQTQSAAMTLAERLRDEMPGVKLMTNHGGGNFKKQFARADKWGARIALVLGESEV
                     ADGTVVVKDLRSGEQTAVAQDSVAAHLRTLLG"
     gene            2797..3417
                     /locus_tag="MOX77_003515"
     CDS             2797..3417
                     /locus_tag="MOX77_003515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfgM family protein"
                     /protein_id="HCA3358946.1"
                     /translation="MEIYENEHDQVDAIKRFFAENGKALAVGVILGVGALVGWRYWSS
                     HQTESARAASLAYQNAVTAVSADKPDSIPAAEKFAAENKNTYGALASMELAQQFVDKN
                     ELKKAEAQLQQGLAATSDENLKAVINLRLARVQLQLKQADAALKTLDAVKGEGWTAIV
                     ADLRGEALLSKGDKKGARSAWEAGVNSDASPALSEMMQMKINNLSI"
     gene            3428..4606
                     /gene="bamB"
                     /locus_tag="MOX77_003516"
     CDS             3428..4606
                     /gene="bamB"
                     /locus_tag="MOX77_003516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamB"
                     /protein_id="HCA3358947.1"
                     /translation="MQLRKLLLPGLLSVTLLSGCSLFSGEEDVVKMSPLPQVENQFTP
                     TTVWSTSVGNGIGEFYSNLHPVMADNVVYAADRAGVVKALNADDGKEIWSVNLGEKDG
                     WFSRSSALLSGGVTVAGGHVYIGSEKAEVYALNTSDGTTAWQTKVAGEALSRPVVSDG
                     IVLIHTSNGQLQALNQADGAIKWTVNLDMPSLSLRGESAPATAFGAAIVGGDNGRVSA
                     VLMQQGQMIWQQRISQATGPTEIDRLSDVDTTPVVVNGVVYALAYNGNLTALDLRSGQ
                     IMWKRELGSVNDFIVDGDRIYLVDQNDRVLALTTDGGVTLWTQSDLLHRLLTSPVLYN
                     GDLVVGDSEGYLHWINVDDGRFVAQQKVDSSGFLTEPTVADGKLLIQAKDGTVYAITR
                     "
     gene            4725..6197
                     /gene="der"
                     /locus_tag="MOX77_003517"
     CDS             4725..6197
                     /gene="der"
                     /locus_tag="MOX77_003517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HCA3358948.1"
                     /translation="MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGR
                     AEVEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAI
                     AKHLRSREKPTFLVANKTDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLL
                     PWMDDVAPQEEVDEDAEYWAQFEAEQNGEEAPEDDFDPQSLPIKLAIVGRPNVGKSTL
                     TNRILGEERVVVYDMPGTTRDSIYIPMERDEREYVLIDTAGVRKRGKITDAVEKFSVI
                     KTLQAIEDANVVLLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQV
                     KETLDFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVSTAMLTRIMTMAV
                     EDHQPPLVRGRRVKLKYAHTGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLEVMG
                     TPIRIQFKEGENPYANKRNTLTPTQMRKRKRLMKHIKKSK"
     gene            6286..6507
                     /locus_tag="MOX77_003518"
     CDS             6286..6507
                     /locus_tag="MOX77_003518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HCA3358949.1"
                     /translation="MEIICPVCHHALERNGDTAHCETCAKDFSLQALCPDCRQPLQVL
                     KACGAVDYFCQNGHGLISKKRVNFVISDQ"
     gene            6853..9045
                     /gene="sinH"
                     /locus_tag="MOX77_003519"
                     /pseudo
     CDS             6853..9045
                     /gene="sinH"
                     /locus_tag="MOX77_003519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461452.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="intimin-like inverse autotransporter SinH"
     gene            9103..10068
                     /locus_tag="MOX77_003520"
     CDS             9103..10068
                     /locus_tag="MOX77_003520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358950.1"
                     /translation="MQATVKRRLTKVALALVVAGYCAAPAVAANGNLKSGQWQIVSEQ
                     TGTIQGTVPWITRAADKTADTDKDHVTVTIDRGDRKIVTEGDKQFHVGDKVTVNWAIG
                     DTEGDLDVDNAATKLTVQWMRYSDQNGSNPEEIGAKGSDTYEIQAGDADHYIGIKITP
                     TTTTGDPAVATELLLKDLSTDAGGGADGDDIPEGPVVDENVHVVIHEKDSNTNLLKNS
                     GTTLKTNTTYQVLLWSDKNGNGTYDAGENVTDQYDYRWKFVGTSKIAGTGTGGIVNEN
                     WNDKDLVIPLTNAEAKEAFEGAEGGVTVGSDGVQGFGLSIDYKRK"
     gene            10188..>10594
                     /locus_tag="MOX77_003521"
     CDS             10188..>10594
                     /locus_tag="MOX77_003521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358951.1"
                     /translation="MDRNRQVNKVVHFLLTLLIMFVASIAPAQALLKGGTWQELNSAT
                     AAVNGTVPRADGAIIPVYQGSMLLDPTKTYDVAFTAMPRDFSADATSTSMRAVNSTDT
                     EGDLFSDPPTIAWENQQPPSVGLLWADAATPDTP"
BASE COUNT         2593 a         2611 c         3021 g         2369 t
ORIGIN      
        1 gctggtgatg aattttaccg ctgactgttg gctcgaagtc actgacgcca cgggtaaaaa
       61 actgtttagc ggtatgcagc gtaaagatgg caatttaaac ctaaccggtc aggcgcctta
      121 taaacttaaa attggcgcgc cggccgcggt gcagatccag tatcaaggaa aacctgtcga
      181 tctgagccgc tttatcagaa ctaatcaggt tgcgcgtctg acccttaatg ccgaaccgac
      241 accggcgcag taacagacgg gtaacgcggg agatttttca tgcataacca ggctccgatt
      301 caacgtagaa aatcgacacg tatttacgtt gggaatgtgc cgattggcga tggcgcccct
      361 atcgccgtcc agtcgatgac taacacgcgt accactgacg tggaagcgac ggttaatcag
      421 atcaaagcgc tggagcgcgt tggcgcagat attgttcgtg tttctgtacc gaccatggac
      481 gccgccgaag cgttcaagct tatcaaacag caggttagcg tcccgctggt tgccgatatt
      541 cacttcgact accgcattgc gctgaaagta gcggaatacg gcgttgactg cttgcgtatt
      601 aaccccggca atatcggtaa cgaagaacgc attcgcatgg tggtggactg cgcgcgcgac
      661 aaaaacatcc ctatccgtat cggcgtaaat gccggatcgc tggaaaaaga tctgcaggaa
      721 aaatacggag agccgacgcc gcaggcgctg ctggaatcag ccatgcgcca tgtcgatcat
      781 ctcgatcgtc tcaactttga tcagttcaaa gtgagcgtaa aagcgtccga tgtattcctt
      841 gccgttgagt cttatcgttt gttggctaaa cagatcgatc agccgctgca tctggggatc
      901 accgaagcgg gcggcgcgcg tagcggggcg gttaagtcgg cgatcggttt aggtctgctg
      961 ttatcggaag gcatcggcga cacgctgcgc gtatcgttgg cggccgaccc ggtggaagag
     1021 atcaaagtcg gtttcgatat cctgaagtcg ctgcgtattc gcgcgcgcgg catcaatttc
     1081 atcgcctgcc cgacctgttc tcgtcaggag ttcgacgtta tcggcacggt gaacgcgctg
     1141 gagcagcgtc tggaagatat catcaccccg atggacgtct cgatcatcgg ttgtgtggtg
     1201 aacgggccgg gcgaagcgct ggtatcgacg ctgggcgtga cgggcggcaa taagaaaagc
     1261 ggcctgtatg aagacggcgt gcgtaaggac agactcgata acgacgatat gatcgcgcag
     1321 cttgaatccc gtattcgcgc gaaagtaagt caacttgatg aagcgcgtcg gattgacgtg
     1381 ctgcaggttg aaaaataaga acgtgatggg aagcggcgcg cttcccgtgt atgattgaac
     1441 ccgcatggct cccggttcgt tcggggaagc gctgagggtt catttttata ttcagaaaga
     1501 gaataaacgt ggcaaaaaac attcaagcca ttcgcggcat gaacgattat ctgcctggcg
     1561 aaaccgccat ctggcagcgc attgaaggca cactcaaaaa cgtgctcggc agctacggtt
     1621 acagtgaaat ccgcttgccg attgtagagc agaccccgtt attcaaacgc gcgatcggtg
     1681 aagttactga cgtggttgaa aaagagatgt acacctttga ggatcgcaac ggcgatagcc
     1741 tgacattgcg ccctgaaggt acggcgggct gtgtacgcgc cggcatcgaa catggtctcc
     1801 tgtacaatca ggaacagcgt ttgtggtata tcgggccgat gttccgtcat gagcgtccgc
     1861 aaaaaggccg ctaccgtcag ttccatcagc taggcgccga agtctttggc ttacaaggcc
     1921 cggatatcga cgcggaactg attatgctga ccgcacgctg gtggcgcgcg ctgggcatct
     1981 ctgaacacgt tagcctggag ctgaactcta ttggttcctt agaggcgcgt gcgaactatc
     2041 gcgatgcgct ggtcgcgttc ctcgaacagc atcaagagac gctggacgaa gactgcaaac
     2101 gccgtatgta taccaatccg ctacgcgtgc tggattcaaa aaatccggac gtgcaggcgc
     2161 tgctcaacga cgcgcctgtt ctcggcgact atctcgatga cgattcacgc gagcactttg
     2221 ccggcctgtg taaattgctg gacgcggcgg ggattgccta caccgtcaac cagcgtctgg
     2281 tacgcggtct ggattactac aaccgcaccg tatttgaatg ggtaacaaac agtctggggt
     2341 cacaaggcac cgtctgtgcg ggtggtcgtt atgatggtct ggtggaacaa ctgggcggtc
     2401 gcgctacccc ggcagtgggc tttgcgatgg gcctggaacg acttgttttg ttagttcagg
     2461 cagttaatcc ggaatttatt gcctctcctg ttgtcgatat atacctggta gctgccggcg
     2521 cacaaacgca gtctgcggca atgacgctgg cggagcggct gcgcgatgaa atgccaggcg
     2581 tgaagctaat gacaaaccac ggcggcggca actttaagaa acagtttgcc cgcgccgata
     2641 agtggggcgc ccgtattgca ctggttcttg gcgaatctga agtcgccgat gggactgttg
     2701 tagtgaagga tttgcgctcc ggtgagcaaa cggcagtggc gcaggacagc gtcgccgcgc
     2761 atttgcgcac tttattgggc taaggagaag gacagcgtgg aaatttacga gaacgaacac
     2821 gaccaggtgg atgcgattaa acgcttcttt gccgaaaacg gcaaagcgct ggctgtcgga
     2881 gtgattttag gggttggcgc gctggttggc tggcgttact ggagcagcca tcagacggag
     2941 tccgcgcgtg ctgcttctct ggcgtatcaa aatgcggtga cggcggtaag cgccgataag
     3001 ccggatagca ttcccgccgc tgaaaaattc gcggctgaga ataaaaatac ctatggtgcg
     3061 ctggcgtcta tggaactggc gcagcagttt gtggataaga atgaacttaa aaaagccgaa
     3121 gcccagttgc agcaggggtt ggcggccacc agcgatgaaa atctcaaagc ggtgattaat
     3181 ctgcgtctcg ctcgcgttca gttacagctt aagcaagctg acgccgcgct gaaaactctg
     3241 gatgccgtta aaggcgaagg atggacggca attgtcgctg atttgcgcgg cgaagcgttg
     3301 ctgagtaagg gtgataaaaa aggcgcgcgc agcgcatggg aagcgggcgt caatagcgat
     3361 gcttctccgg cgttgagcga aatgatgcag atgaaaatca ataatttgtc catctgagag
     3421 ggacccgatg caattgcgta aattacttct gccagggttg ctttccgtta ccctgctcag
     3481 cggctgttca ctgtttagcg gcgaagaaga tgtcgtcaag atgtctccat taccgcaggt
     3541 tgaaaaccag tttaccccga ccactgtctg gagcacctct gtcggtaacg gaattggtga
     3601 attttattct aaccttcatc cggtaatggc agataacgtg gtctatgcag ccgatcgcgc
     3661 gggcgtggta aaagcgctca atgcggatga tggcaaagag atctggtctg tgaatctggg
     3721 cgagaaagac ggctggttct ctcgttcgtc cgcgctgttg tccggcggcg tcactgtcgc
     3781 gggcggtcac gtctatatcg gcagtgaaaa ggccgaggtt tatgcgctga ataccagcga
     3841 cggtaccaca gcatggcaga cgaaggtcgc aggcgaagcg ttgtctcgcc cggttgtcag
     3901 tgatggaatc gtccttatcc ataccagcaa cggtcagttg caggcgctaa atcaggcgga
     3961 tggcgccatt aaatggacgg tgaacctgga tatgccttcg ctgtcgctgc gcggcgaatc
     4021 tgcgccggca accgcgttcg gcgcggctat cgttggtggt gataatggcc gcgtcagcgc
     4081 cgtgttgatg caacaagggc agatgatttg gcagcagcgt atctcccagg ccactggccc
     4141 aacggaaatt gaccgtctga gcgacgtcga taccacgccg gttgtggtaa acggcgtcgt
     4201 ttacgcgttg gcgtataatg gtaacttaac ggcgctggat ctgcgcagtg gtcagattat
     4261 gtggaaacgc gagctggggt cggtcaatga ctttatcgtc gacggcgacc gtatctacct
     4321 ggtcgatcag aacgatcgtg tgctggcgct gaccactgac ggcggcgtaa cgctgtggac
     4381 gcaaagcgat ctgctgcacc gtttgctgac ctccccggta ctgtataatg gtgatttagt
     4441 cgtcggcgat agcgaaggtt atctgcactg gattaatgtc gatgacgggc gttttgtggc
     4501 ccaacaaaaa gtagacagtt ccggttttct gaccgaaccg acggtggcgg atggtaaact
     4561 gctcatccag gccaaagacg gtacggtcta cgcgattacg cgttaatcgt cacggttgtg
     4621 cgtttgaaaa aacggctcct ggtgtagggg ccgttttcct gtttttaaca acggcgtaaa
     4681 aatgacgcgc gttgtctgat gattttttaa atgaggcttt aaacatggta cctgtggtcg
     4741 cgcttgtcgg gcgccctaac gtcggaaaat ccacgctatt taaccgtctg acccgcaccc
     4801 gagatgcgtt ggttgcggat ttcccgggtc tgactcgtga ccgtaagtac ggtcgtgcgg
     4861 aggttgaagg ccgcgagttt atctgtatcg acaccggcgg tattgacggc accgaagacg
     4921 gcgtcgaaac gcggatggcg gaacagtcgc tgctggcgat tgaagaagcg gatgtggtgt
     4981 tattcatggt agatgcgcgc gctggtctga tgccggcgga tgaagcgatt gccaaacatc
     5041 tgcgctcccg tgaaaaaccg accttcctgg tggcgaataa aacggatggt ctcgatcccg
     5101 atcaggcggt tgtcgatttt tactcgctgg gattaggcga aatttatcct atcgccgcct
     5161 cacatggtcg cggcgtattg agcctgctgg aacatgtgct tctgccgtgg atggatgatg
     5221 tcgcaccgca ggaagaagtg gatgaagacg cggaatactg ggcgcagttc gaggcggaac
     5281 aaaatggcga agaagcgccg gaagatgatt ttgacccgca aagcctgccg ataaagctag
     5341 cgattgtcgg tcgcccgaac gtaggtaagt ccacactcac taaccgtatt ctcggcgaag
     5401 agcgcgtggt ggtatacgac atgccgggca ccactcgcga cagtatttat atcccgatgg
     5461 aacgcgacga acgggaatat gtgctgattg acacggcggg ggtgcgtaag cgcggaaaaa
     5521 tcaccgatgc ggtagaaaag ttctcggtga ttaaaacgtt acaggcgatt gaagacgcta
     5581 acgtcgtact gttggttatc gatgcgcgcg aggggatctc tgaccaggat ttgtctctgc
     5641 tgggctttat cctcaatagt gggcgctcac tcgttatcgt agtcaacaaa tgggatggcc
     5701 tgagccagga agtcaaagag caggtgaaag agacgctgga tttccgtctg ggctttattg
     5761 attttgcccg cgtgcacttt atctctgcgc tgcacggcag cggtgtcggg aacctgtttg
     5821 agtccgtacg cgaggcttac gacagttcca ctcgccgggt gagcactgcg atgctgaccc
     5881 gtatcatgac gatggcggtg gaagatcatc agccgccgct agtgcgcggt cgccgtgtga
     5941 agctgaaata tgcccacact ggcggctata acccgccgat tgtggttatt cacggcaacc
     6001 aggtaaaaga tctgccagac tcctataagc gctatctgat gaactacttc cgcaagtcgt
     6061 tggaagtgat gggtacgccg attcgcattc agtttaaaga aggggagaac ccgtatgcga
     6121 acaagcgtaa cacactgacg ccaacgcaaa tgcgcaaacg taagcgtctg atgaagcata
     6181 tcaagaaaag caagtaatgc tttttcagta atattccagg cctgataagc gcagcgctat
     6241 caggcctttc aagtaaaagc gagtcacgcg cctgaggaga atgttatgga aataatctgc
     6301 cctgtttgcc atcatgcgct ggagcgcaat ggcgatacag cccattgcga gacatgcgct
     6361 aaggatttct cgttacaggc actttgtcct gactgccgcc agccgttaca ggttttgaaa
     6421 gcctgcggcg cagtggacta tttttgccag aacggtcatg gtttaatttc aaaaaaacgg
     6481 gttaatttcg tcatttccga tcaataaaac cactgtcgac gttgcgtcgc agagcagagg
     6541 cgccgacgtc ttatccggct aagggcaaaa gcgttattct atactcccgt aatatcagca
     6601 tagtaccctg cccggcggtt attttattct ttttatcgat tcaactattt atagggaata
     6661 ttattcccga aaattaatat tagaaataaa taacagcttt ccttttattt attatatcaa
     6721 tattataagt ctgtttcata ttaaactttt ctttttagga atatatttag gcctgttagt
     6781 tatgattccc tatgaatcat ccatataata tcgtctcata gcagcgtgtt tatttaacaa
     6841 cagggatatc atatggtgcg aaggattcgc attctggttt tgctattagt gtctggagta
     6901 tcagttgcgg cttccggcgc aggtaactct gtacctgcaa acgatgaaag ccactcctcc
     6961 ctgcctgatt tagccagcga atccgcgaaa aaagaagaac aggaaaataa aggaaagtcc
     7021 tttaaagaac agggcgctga ctactttatt aattccgcca cccagggctt tgataatctc
     7081 accccggaag cgctggaatc ctaggcgcgt agctatttgc aaaaccaaat cacttcatca
     7141 gcacagtcat atcttgaagg cgtaatgtca ccttatggca agatccgtac cagcctctcc
     7201 gtaggcgaag gcggcgatct ggacggcagt tcgctggatt atttcgttcc ctggtatgat
     7261 aacgaaaaaa ccttactttt tagccaactc tcagcccaac gtaaagaaga ccgcactatt
     7321 ggtaactttg ggcttggcgt gcgccagaac gtcggcaact ggctgcttgg cggcaacgca
     7381 ttctatgact acgattttac gcgcggtcac cgtcgactag gtctgggaac cgaagcctgg
     7441 acggattacc tgaaattctc cggcaactat taccatcctc tttctgactg gaaggattcc
     7501 gaagatttcg acttttatga agaacgaccc gcgcgcggtt gggatatccg catggaaagc
     7561 tggctgccct tttatccgca gcttggcgct aaattagttt acgaacagta ctacggcgat
     7621 gaagtggcgc tgtttggcac cgataatctg caaaaagatc ctcatgccgt taccttgggg
     7681 ctggaatata cgccggtacc gctggttacg gttggttcgg attacaaagc cggtactggc
     7741 gataataacg attttagcgt taaagcgact gtgaactacc agataggaac gccgctggcg
     7801 gcgcaactcg atccggaaaa cgttaaaatc cagcactctt taatgggcag ccgcaccgat
     7861 tttgtcgatc gtaacaattt catcattctc gaataccgcg agaaagatcc gctggacgtc
     7921 acgttgtggc tgaaggccga cgccaccaac gaacacccgg aatgcgtgat tgaagatacg
     7981 cctgaggccg cggtggggct ggagaaatgt aagtggacgg tcaacgcgct gattaaccat
     8041 cattacaaaa ttatttctgc ttcctggcag gcgaaaaaca acgccgcccg tactctggtg
     8101 atgccggtgg taaaagcgga tgcgctgacc gaaggcaaca ataacagctg gaatctggtg
     8161 cttcctgcct gggttaacgc cgataccgag gcgcagcgca ccgccctgaa cacctggaaa
     8221 gtacgcatga cgctggaaga cgaaaagggc aataagcaga actccggcgt ggtggaaatc
     8281 accgtccagc aggatcgcaa aattgagctg atcgtcgaca acattgccga taacgatcgc
     8341 agcgatcaca gccatgaagc cagcgcgctg gccgatggcg aagacggcgt ggtgatggat
     8401 ctcctgatca ccgactcctt tggcgactcc acggatcgca atggtaacga actggtggac
     8461 gatgctatga cgcccgtgtt gtacgacagc aatgataaaa aagtcacgct ggcccagacg
     8521 ccctgcacca cggaaacccc ctgcgtgttt attgccagcc gtgacaaaga agcggggacg
     8581 gtgacgcttt ccagcaccct gccgggcact ttccgctgga aggcgaaaga agacgcctat
     8641 ggcgacagta actacgttga tgtcactttt atcggcgaca acctgagcgc gctgaatgcg
     8701 gtgatttatc aggtcaaagc cgccaaccct gtcaacctga tcggcaaaga agataaacat
     8761 cctacggtta ataacaccta ccgtttcctg ctgtggcgcg acaagaataa agacggcgta
     8821 ttccagatgt ccgagcagct cacggaagaa gagatggccc tgtacgacta ccagtgggag
     8881 tttaccggac agagtacaaa cggacatacc ggcgcgctgg ccaacaccat aaatgaagat
     8941 cttgttctgc cagtaaccaa taaagaggcg gcgcagaagt ttgccgccaa tgtggaagat
     9001 ggcgttcagg gttacggtat acgcgttacg tatagtcaga aatagcgtca gcgttatggc
     9061 tgaccagcca gccgctgaat tttgagaaaa aagagagtct gaatgcaagc aacagtaaaa
     9121 cggcggctga cgaaggtcgc tttagcatta gtagttgccg ggtattgcgc cgcgccagcg
     9181 gtggcggcaa acggtaatct gaaatcgggg cagtggcaga ttgtctctga acagacgggc
     9241 accattcagg gtacggtgcc gtggattacc cgtgcggcgg ataagaccgc ggataccgac
     9301 aaagatcacg taacggtaac tatcgatcgc ggcgatcgta aaattgtgac cgaaggcgat
     9361 aagcagttcc acgttggcga taaggtcacg gtcaactggg cgattggcga tacggaaggc
     9421 gacctggatg tcgacaacgc cgccacgaaa ctgacggtgc agtggatgag atacagcgac
     9481 cagaatggta gcaatcccga agagattggc gccaaaggca gcgataccta tgaaattcag
     9541 gcgggtgacg cagaccatta tatcggtatc aaaatcacgc caaccaccac caccggtgac
     9601 cctgccgtgg caaccgaact gctgttgaaa gacctgtcga ccgatgcggg cggtggtgcg
     9661 gatggcgacg acattccgga aggtccggtg gtggatgaaa acgtccatgt ggttattcat
     9721 gagaaagatt cgaataccaa cctgttgaag aattcaggga cgacactcaa aacgaatact
     9781 acctatcagg tattgctgtg gagcgataag aacggcaacg gcacctatga tgccggtgaa
     9841 aacgttaccg accagtatga ctaccgctgg aaattcgtcg gcaccagtaa aattgcaggt
     9901 accggtactg gtggtatcgt caacgaaaac tggaacgata aagaccttgt catcccgctt
     9961 accaacgccg aagcgaaaga ggcgttcgag ggtgcggaag gcggcgttac cgtgggtagc
    10021 gacggtgtcc agggctttgg tctgtccatc gactacaaac gcaaataagt tgtcctcaac
    10081 ataccactcc ccgcggggag tggtattttc cgcgcacttt gcttagccgc gcgctaagca
    10141 aagtgggttg aattacgaca gagaatgaaa acgggtggct atcgctcatg gacaggaatc
    10201 ggcaagtgaa taaagttgta catttcttac tgacattact gatcatgttt gtagcgtcga
    10261 tcgcgcctgc gcaggcctta ctgaaaggcg ggacctggca agaattgaac tcagccactg
    10321 ccgcagttaa cggcaccgtg ccccgcgccg acggcgcgat tattcccgtg tatcagggaa
    10381 gtatgctgct tgacccgacc aaaacctacg atgttgcgtt taccgccatg ccgcgcgatt
    10441 ttagcgcgga tgccacctca acctcgatgc gtgcggtcaa ttccaccgat accgaaggcg
    10501 atctctttag cgatccgccg accattgcct gggaaaatca acagccgccg agcgtgggcc
    10561 tgttatgggc cgatgccgcc acgcccgaca cgcc
//
LOCUS       DAGWFR010000140        10452 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.142, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000140 DAGWFR010000000
VERSION     DAGWFR010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 10452)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10452)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10452
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.142"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..849
                     /gene="uhpT"
                     /locus_tag="MOX77_003522"
     CDS             <1..849
                     /gene="uhpT"
                     /locus_tag="MOX77_003522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hexose-6-phosphate:phosphate antiporter"
                     /protein_id="HCA3358952.1"
                     /translation="GANYLFDGHVIGMFIFPSIIALIVGFIGLRFGSDSPESYGLGKA
                     EELFGEEISEEDKETEENEMTKWQIFVEYVLKNKVIWLLCFSNIFLYVVRIGIDQWST
                     VYAFQELKLSKEVAIQGFTLFEVGALVGTLLWGWLSDLANGRRALVACVALALIIATL
                     GVYQHASNQYVYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGAADGIKGTFDYLIG
                     DSFAKLGLGMIADGTPVFGLTGWAGTFAALDAAAIGCICLMAMVAVMEERKIRREKKI
                     QQVNIA"
     gene            1042..1494
                     /locus_tag="MOX77_003523"
     CDS             1042..1494
                     /locus_tag="MOX77_003523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1198 domain-containing protein"
                     /protein_id="HCA3358953.1"
                     /translation="MIWLILATFVVVFIVGFRVLTSDTRRAIRRLSERLNIDVVPIES
                     MIDQMGKTAGGEFLQYLHRPDESHLQNAAQVLLIWQMVIVDGGDQNLQRWHRLLQKAR
                     LAAPITDTQVRLALGFLREMEPDMQEINAFQLRYNAFFQPEEGVHWLH"
     gene            1847..2590
                     /locus_tag="MOX77_003524"
     CDS             1847..2590
                     /locus_tag="MOX77_003524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HCA3358954.1"
                     /translation="MKTLSKSSHIPLYQQVVEWIRESIYSGELVEDDRIPSEFQIMDM
                     LEVSRGTVKKAVDQLVREGVLVQVQGKGTFVKKENVAYPLGEGLLSFAEALASQKINF
                     TTSVITSRLEPANRFVAEKLSIKPGQDVLFLKRLRCIGDEKVMLIENRINIDLCPGII
                     DVDFTRENLFSAIERLSDKKISFSESRYAAKLIGNERGHYLDIGEDAPVLHLEQLVFF
                     SRGLAIDFGNVWLKGNKYYLGTILQRLDA"
     gene            2608..3081
                     /locus_tag="MOX77_003525"
                     /pseudo
     CDS             2608..3081
                     /locus_tag="MOX77_003525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462683.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
     gene            3078..3365
                     /locus_tag="MOX77_003526"
     CDS             3078..3365
                     /locus_tag="MOX77_003526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HCA3358955.1"
                     /translation="MSKMILFVCATGVATSTAVAEKVMEYCKDNGLDVNYSQTNVASL
                     PNNTDGAALVVSTTKVPYELDIPVVSGLPIITGVGEDKVLEKIVSILKGQA"
     gene            3441..4799
                     /locus_tag="MOX77_003527"
     CDS             3441..4799
                     /locus_tag="MOX77_003527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS galactitol transporter subunit IIC"
                     /protein_id="HCA3358956.1"
                     /translation="MNDIAHTLYTVVQYVLGFGPTVLLPLVLFFLALFFKVKPAKALR
                     SSLIVGIGFVGIYAIFDILTSNVGPAAQAMVERTGISLPVVDLGWPPLAAITWGSPIA
                     PFVIPLTMLINVAMLALNKTRTVDVDMWNYWHFALAGTLVYYSTGSFVLGLSAAAIAA
                     IVVLKLADWSAPLVAKYFGLEGISLPTLSSVVFFPIGLLFDKIIDKIPGVNRIHIDPE
                     NVQKKMGIFGEPMMVGTILGVLLGIIAGYDFKHILLLGISIGGVMFILPRMVRILMEG
                     LLPLSEAIKKYLNAKYPGRDDLFIGLDIAVAVGNPAIISTALILTPISVFIAFLLPGN
                     KVLPLGDLANLAVMASMIVLACRGNIFRAVITAIPVIIADLWIATKIAPFITGMAKDV
                     NFKMAEGSSGQVSSFLDGGNPFRFWLLEIFNGNIIAIGLIPVLALVIYGVFRLTKGTV
                     YA"
     gene            4792..6276
                     /locus_tag="MOX77_003528"
     CDS             4792..6276
                     /locus_tag="MOX77_003528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate kinase"
                     /protein_id="HCA3358957.1"
                     /translation="MPDYHAALVIDIGTTNCKVSCYSCHDVSVLEVRKFPTPTISSDK
                     GEVDLDIEALWQALRLVMAELVASVPFPVKNISIASFGESGVFVDKEGVILTPMLAWY
                     DRRGESYLSSLSKAEAEELYSITGLPPHSNYSAFKMRWLLDNYSLHERKDICWLHAPE
                     VLLWRMTGAKKTEISLASRTLCLDIARRTWSRNAAGILGIPFGVLAPLIKPGEVAGWV
                     TATLRQELGLPHEVKVTLAGHDHMVGARALQMQPGDVLNSTGTTEGILLLNTQPTLDV
                     QARRDKLANGCYSDGEFFTLFASLPVGGYALEWVKKTFRLTDKEISTGLEKVMEQYLK
                     PSWSVEHVPVFIPHLRGSGSPHKNQHTRGLLFGLTDSLPPESLLESVFIGLAMEFAHC
                     HGCFNIPAGRTVKVIGPAVKNPYWLQLKADILQCPIEAIAFDETVSLGALLIACPNVV
                     PPTVPVAERYFPDAVRSAKLKIYQQQWLSFYQFKLRQEGAFIGE"
     gene            6339..7199
                     /locus_tag="MOX77_003529"
                     /pseudo
     CDS             6339..7199
                     /locus_tag="MOX77_003529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462679.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase"
     gene            7209..7478
                     /locus_tag="MOX77_003530"
     CDS             7209..7478
                     /locus_tag="MOX77_003530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HCA3358958.1"
                     /translation="MIRQKVRVMNSTGLHARPAATLAKIVKKYQSSLTLVNNDKEIPI
                     KGMMSILGAGVKGNTMIDLICDGQDELAFMDELKSAFADGFGESV"
     gene            complement(7569..7892)
                     /locus_tag="MOX77_003531"
     CDS             complement(7569..7892)
                     /locus_tag="MOX77_003531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator"
                     /protein_id="HCA3358959.1"
                     /translation="MSAKTKFKSPAFEAIHSAASGLFSVDAIPQETMRSFDTACLSSI
                     KDLQPLEIKALREELNVSQSVFARYLNTSVSTVQKWESGAKRPSGMSLKLLNVVQKHG
                     LKVLV"
     gene            complement(7876..8234)
                     /locus_tag="MOX77_003532"
                     /pseudo
     CDS             complement(7876..8234)
                     /locus_tag="MOX77_003532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462676.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
     gene            8450..9643
                     /gene="nepI"
                     /locus_tag="MOX77_003533"
     CDS             8450..9643
                     /gene="nepI"
                     /locus_tag="MOX77_003533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine ribonucleoside efflux pump NepI"
                     /protein_id="HCA3358960.1"
                     /translation="MNENIAEKFRADGVARPNWSAVFAVAFCVACLITVEFLPVSLLT
                     PMAQDLGISEGVAGQSVTVTAFVAMFSSLFITQIIQATDRRYIVILFAVLLTASCLMV
                     SFANSFTLLLLGRACLGLALGGFWAMSASLTMRLVPARTVPKALSVIFGAVSIALVIA
                     APLGSFLGGIIGWRNVFNAAAVMGVLCVIWVVKSLPSLPGEPSHQKQNMFSLLQRPGV
                     MAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFDVDGLTLVLLSFGIASFVGTSFSSYVL
                     KRSVKLALAGAPLLLALSALTLIVWGSDKTVAAAIAIIWGLAFALVPVGWSTWITRSL
                     ADQAEKAGSIQVAVIQLANTCGAAVGGYALDNFGLLSPLALSGGLMLLTALVVAAKVR
                     ITPMS"
     gene            complement(9703..>10452)
                     /locus_tag="MOX77_003534"
     CDS             complement(9703..>10452)
                     /locus_tag="MOX77_003534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 1 protein"
                     /protein_id="HCA3358961.1"
                     /translation="RYDGEIGVVLNLTPSYPRSQHPADVQAAHHADLLFNRSFLDPVL
                     KGEYPAELVALLKTYDQLPACQPGDRQLIADGKIDLLGINYYQPRRVKCRDTAVNPQA
                     PFMPEWLFDYYDMPGRKMNPYRGWEIYAPGIYDIITNLRDNYGNPRCFISENGMGVEN
                     EQRFVQAGQIHDDYRIDFISEHLKWLHKGISEGCHCLGYHMWTFIDNWSWLNGYKNRY
                     GFVQLDLATQTRTVKKSGEWFAATAEHNGFD"
BASE COUNT         2487 a         2336 c         2688 g         2941 t
ORIGIN      
        1 ggcgccaact acctgttcga cggtcacgtc atcggcatgt ttatcttccc gtcgattatc
       61 gcgctgattg ttggctttat cggtctgcgt ttcggcagcg actccccgga atcttacggt
      121 ctgggtaaag ctgaagaact gttcggcgaa gagatcagcg aagaggataa agagactgaa
      181 gaaaacgaaa tgaccaagtg gcagatcttt gttgaatatg tgttgaaaaa caaagtgatc
      241 tggctgctgt gtttctccaa tatcttcctg tatgtggtgc gtattggtat cgaccagtgg
      301 tcaaccgtct acgccttcca ggaactgaaa ctttctaaag aggtggcgat tcagggcttt
      361 accttgtttg aagtgggcgc gctggtcggc acgttgctgt ggggctggct ctctgacctg
      421 gcgaacggtc gtcgcgcgct ggtagcctgt gtggcgctgg cgttgatcat cgctaccctc
      481 ggcgtctacc agcacgccag caaccagtat gtctatctgg cctcgctgtt cgcgctcggt
      541 ttcctggtgt ttgggccgca gctattaatt ggtgtggcgg ctgtcggttt cgtaccgaaa
      601 aaagccatcg gcgctgcgga cggtatcaag ggcaccttcg attatcttat cggcgatagc
      661 tttgctaagc tgggtctggg catgattgcc gacggcaccc ccgtttttgg tctgaccggt
      721 tgggcgggta ccttcgccgc gctggacgct gccgcgatcg gctgtatctg cctgatggcg
      781 atggtcgccg tgatggaaga gcgcaaaatc cgccgtgaga aaaaaattca gcaagtcaat
      841 atcgcttaaa tgtgtgcatt tggtaacgtt ttgcccggct taacgccggg cttttttatg
      901 ccttgcgttc gtcagacagg acatccggtg tctggcgtaa atgaagacag gcgttaataa
      961 atcacatcct gacaggccag aacgtcgaca gttataaatt taccgttatg atgggcatcc
     1021 tgtttggtga cggatgtgcg catgatttgg ttgattctgg ccacgtttgt ggtggtgttt
     1081 attgtgggtt ttcgggtgct gacatcggat acccgccggg cgattcgccg tctgagcgaa
     1141 cgtctgaata ttgatgtagt gccgatagaa tcgatgattg atcagatggg taaaacggcg
     1201 ggcggtgagt ttttacagta tctgcatcgc cctgatgaat cgcatttgca aaatgccgct
     1261 caggtgttac tgatctggca aatggtgatt gtcgatggcg gcgatcagaa tttgcagcgg
     1321 tggcatcgct tgctgcaaaa agcgcgttta gccgcgccga tcaccgacac acaggtacgg
     1381 ctggcgctgg gctttttgcg cgaaatggaa cccgatatgc aggagatcaa cgcgtttcaa
     1441 ctgcgctata acgccttttt tcagccggaa gagggtgtcc actggctgca ttgatactct
     1501 tcactatctc gttaacaaaa gacgagatga atgaggctgg caagggcggc gagccacgat
     1561 taacggccgg atggcacgat tcatcgttag ccaaataaag cgtagccgcc atcgtagttg
     1621 ctaagggtga accacagaag taacgcaccg aataaccgct aacgacgcca aaacatcaga
     1681 gacttatagc tcatcatttc tgtgacatat atcacggaaa tgtgatcttg ttttgaacac
     1741 caaaactgtg actccttgcc atacctcctg tctcaaaatt tcttatcata aactcgaagt
     1801 tgtacatgat tgtctataga caactctaaa tgtttaggcg cgcactatga aaacattgag
     1861 taaaagttca cacatcccac tgtatcaaca ggttgtggag tggataaggg aaagtattta
     1921 tagcggagaa ttggttgagg atgaccggat accttcagag tttcaaatca tggatatgct
     1981 ggaggtgagt cgcggtaccg ttaaaaaagc ggttgaccaa cttgtccggg aaggtgttct
     2041 tgtgcaagtg cagggtaaag gaactttcgt aaagaaggaa aatgttgctt acccactggg
     2101 tgaaggtttg ctctcctttg ctgaagcctt agccagccag aagataaact tcacaaccag
     2161 cgtcataacc tcccgactgg aacccgctaa ccgctttgta gcagagaaac tgagtatcaa
     2221 accgggacaa gatgttttat ttcttaaacg ccttcgttgt attggcgatg aaaaagtcat
     2281 gttgattgaa aatcgtatca acattgatct ctgccccggt attattgatg tagattttac
     2341 cagggagaat ttattttcag caatagaaag attatctgat aagaaaataa gtttttctga
     2401 aagccgttac gcagctaaat taattggtaa tgagcgaggc cattatcttg atattggtga
     2461 agacgcacct gttttgcatt tggaacagtt ggtatttttc tctagaggat tggccattga
     2521 ttttggtaac gtctggttaa aaggtaataa atattatctt ggcactattt tacagcgcct
     2581 ggatgcctga ctagcaaaga ggaatctatg caggatattc attttcgccg tcattatgtt
     2641 cgccacctcc ctaaagaggt gagtcagaat gacataatca aggctcttgc cagtccgtta
     2701 attaacgatg gtatggttgt atctgatttt gccgatcacg tcattacgcg agaacagaat
     2761 tttccaacgg gtctaccggt tgagcctgta ggtgtcgcta ttccacatac tgatcacagg
     2821 tatgttcgcc aaaacgccat tagcgttgga atactggcag aacccgtcaa tttcgaagat
     2881 atgggcgggg aaccagatcc cgtacctgtc agggtggtgt ttatgcttgc tttaggtgaa
     2941 agcaataagc agctcaacgt actgggttgg attatggatg tgatctagga tgaggatttt
     3001 atgcagcagt tactggtcat gaatgatgat gaaatttatc agtcaattta cacacgcata
     3061 tctgaaagag gtgaagtatg agtaaaatga tactatttgt ttgcgcaacg ggtgttgcta
     3121 cttccacggc tgtggcagaa aaagtaatgg aatattgtaa agacaatggg cttgatgtta
     3181 attattccca aactaatgta gcctcattgc caaacaatac cgatggtgca gctttggttg
     3241 tatcaacaac gaaagttcct tatgaactgg atattccggt tgttagtggt ctgccaatca
     3301 ttaccggagt aggtgaagat aaagttcttg aaaaaatagt ttcaatcctt aaaggccaag
     3361 cctgatttca taaataaaaa acagataaat tacccaggcg ctaacgcgag gtctggtcac
     3421 atctgaataa gaggtcggat atgaatgata tagcacatac tctctatacc gttgtgcaat
     3481 atgtcctggg atttggccca acggttttat tgccgctggt cctttttttc ctggcattgt
     3541 tcttcaaagt aaaacccgct aaagcacttc gctcatcgtt aattgtcgga atagggtttg
     3601 tcggaattta tgccatcttt gacatactta ccagcaacgt aggcccggct gcacaggcaa
     3661 tggttgagcg aactggtatt agtcttcctg ttgtcgattt aggctggcca ccattggccg
     3721 caattacctg gggctcacca atcgccccct ttgtcattcc gctgacgatg ctgattaatg
     3781 tcgccatgct ggccctgaat aagacacgta ctgttgatgt cgacatgtgg aactactggc
     3841 actttgccct ggcgggaacg ctggtttact acagcacagg gagttttgtt ttgggtctgt
     3901 ccgcagccgc tattgccgcg atcgtggttc tcaaactggc ggactggtca gcgccattag
     3961 tggcaaagta cttcggtctg gaaggtattt cacttccgac cctgtcatct gtcgtcttct
     4021 ttccaattgg attgctgttc gacaaaatta tcgacaagat cccgggtgtt aaccgtattc
     4081 atattgatcc ggaaaacgtt cagaaaaaaa tgggaatctt cggcgagcct atgatggtgg
     4141 gtactattct gggggtcttg ttgggcatca ttgccgggta tgactttaaa catatcctgt
     4201 tgctggggat cagcattggc ggtgtcatgt tcattcttcc gcgtatggta cgaattttga
     4261 tggaaggttt attacctctg tctgaagcca ttaagaaata tttgaatgcc aaatatcctg
     4321 gccgtgatga tctctttatc ggactggata tcgcggtagc agtaggtaac ccagccatta
     4381 tctctacagc actgattctg acacccatct ctgtcttcat tgcattcctt cttcctggca
     4441 ataaagtcct gccactcgga gaccttgcga acctggcagt catggcttcc atgattgtac
     4501 tggcatgtcg tggcaatatt ttccgggctg tgataaccgc aattcctgtt attatcgccg
     4561 acttgtggat tgcgaccaaa attgcgccat ttattaccgg tatggctaaa gatgtcaatt
     4621 tcaaaatggc tgaggggtca agtggtcagg tatcaagctt ccttgatggc ggtaacccct
     4681 tccgtttctg gctgcttgaa attttcaacg gaaatattat tgctatcggg ctgattcctg
     4741 tgcttgcgct ggttatttat ggtgtttttc gcctgacaaa aggaacggtc tatgcctgat
     4801 taccacgcag cgcttgtcat tgacattggt acaactaact gcaaagtcag ctgctattcc
     4861 tgtcatgacg tgtcagttct ggaagtccgc aagtttccga cgccaacaat atcgtcggac
     4921 aaaggcgagg tagatttaga tatcgaagcg ctgtggcagg cactgcgact ggtaatggct
     4981 gaactggtgg cttcagtacc gtttccggta aaaaatatca gtattgcgag tttcggtgag
     5041 tctggcgtct ttgtggataa ggagggcgtc attcttaccc cgatgctggc ctggtatgat
     5101 cgacgtggtg aatcttatct ctcgtcatta agcaaggcag aggctgaaga actgtattct
     5161 ataacgggat tgccacctca cagtaattac tcagcattta aaatgagatg gttgcttgat
     5221 aactactcct tgcatgaaag aaaagatatc tgctggttac atgctccaga agtgttgttg
     5281 tggcgaatga caggtgcgaa aaagacggaa atatccctgg ccagtagaac gttgtgtctg
     5341 gacattgctc gccgtacctg gtctcgtaat gctgccggga ttctcggcat accgttcggt
     5401 gtactggctc cgttgataaa gccgggtgaa gtggctggat gggtgacggc aacgctcagg
     5461 caggagttgg gattaccaca tgaggtaaaa gttaccctgg ccggacacga tcatatggtc
     5521 ggtgcccgcg cattacagat gcaaccgggc gatgtgctga attctaccgg cacgacagag
     5581 ggtattttac tgctgaatac acagccaacg cttgatgtgc aggctcgcag ggataagctg
     5641 gcaaatggtt gttactccga tggtgaattt ttcacgcttt tcgcttctct gcctgtcggc
     5701 ggttatgcgc ttgaatgggt gaaaaaaacc tttcgtttaa ctgataagga aataagcaca
     5761 ggcctggaaa aagtcatgga gcaatacctc aaaccttcct ggtctgtcga gcatgtgccg
     5821 gtatttattc ctcatttgcg gggctcgggt tcgccacata aaaaccagca cactcgtggc
     5881 ctgctttttg gtctgacgga ttcacttcct ccggagtctc tgcttgagag tgtctttatc
     5941 ggcctggcga tggagtttgc acactgtcac gggtgcttta atatcccggc aggcaggaca
     6001 gtaaaagtca ttggccctgc ggtgaaaaac ccatactggc tccagttgaa ggctgacatc
     6061 ctccagtgtc caattgaggc cattgctttt gatgaaaccg tctcccttgg agcattgttg
     6121 atagcctgtc cgaatgttgt ccccccgact gttcctgtgg ctgagcgata ttttcctgac
     6181 gcggttcgtt ctgcaaagtt gaaaatatat cagcagcaat ggctgtcatt ttaccaattt
     6241 aaactgcggc aagaaggggc gtttattggt gaataactgt gataactcaa tagttcgata
     6301 atttacttat actgctcaca taaatatctg gagttaatat gtctttagtc aatggtagga
     6361 tcctgctcaa ttgtattcag gaaaaacatg tccttgcggg ggcatttaat acaacgaacc
     6421 tggagacaac aatttccatt cttaatgcaa tagaacgttc cggattgccc aattttattc
     6481 aaattgctcc tactaatgca cagctttcag gttacgatta catttatgaa atagtgaagt
     6541 gacatgccga taaaatggat attcctgtca gcctgcatct ggatcatggg aaaactctgg
     6601 aagatgttaa gcaggctgtc cgggccggat ttacctcagt aatgattgat ggcgcggcgc
     6661 taccgttcga agaaaatatt gcatttaccc gagaagctgt cgatttctgt aaatcatttg
     6721 gtgttcccgt cgaagcggaa ttaggcgcta ttctgggtaa ggaagatgat catgtcagcg
     6781 aggctgactg caaaactgaa cctgagaagg ttcagcgctt tgttgaggag acagggtgcg
     6841 acatgctggc agtgtcaatt ggtaatgtac atggtcttga agacatccca cgcattgata
     6901 tcccgctatt acaacgcatc gcgtctgtca gtccggtacc tttggttatt catggaggtt
     6961 ctggtattga cgcggatatt cttcgcagct ttgttaatta caaagtagcc aaagtgaata
     7021 ttgcgagtga tttgcgcaaa gcctttatta ctactgttgg taaggcttgg gtaaataata
     7081 acaacgaggc taatctggcg cgtgtcatgg cgagcgcaaa acaggcagtt gaggatgatg
     7141 tttattctaa aattaagatg atgaataaac atcactcagc actccgcaaa gtctcttaag
     7201 gaaaatatat gattagacaa aaagtacgcg ttatgaacag tacggggctt catgcgcggc
     7261 cagccgctac acttgcgaaa attgtcaaaa aataccagtc ttcattaacg ctagttaata
     7321 atgacaaaga aattcccatt aaaggaatga tgagtatttt gggggctggc gtaaagggaa
     7381 acacaatgat tgatttaatt tgtgatggac aggatgaact ggcttttatg gatgaattaa
     7441 aatccgcatt tgctgatggc tttggtgagt cagtatagtg caattcccgt caaacggcgc
     7501 aggaagttgt agaggcttcc tgcactcatt atcgtatgaa tagccttaac agaccatcgg
     7561 taaaaccctc ataccagcac ctttagcccg tgtttttgga caacattaag tagtttcagt
     7621 gacatcccgc tgggacgctt ggcgccgctt tcccactttt gaaccgttga tacgctggta
     7681 ttcaggtacc gagcgaaaac cgactggcta acgttgagtt cttctcgtaa cgcttttatt
     7741 tcaagtggct gcaggtcttt gatgctgctt aagcaggccg tgtcaaaact gcgcattgtc
     7801 tcctggggaa tggcatccac gctaaataat ccagatgccg cgctatgaat cgcttcaaag
     7861 gcagggcttt tgaatttagt ttttgctgac atggcgcacc tctaccagtt ctttgttatt
     7921 aatgagtgcc gttatctgat cttcggtcag gcaagcatag tgttttgcta actcacggaa
     7981 acccgcaagt tcgcgatagc gaatgttggc catattctgt ttggtataca ggaaggtgta
     8041 aaaccaatgt tcgcctccct ttgccaacac gattgcgcga tcgcggtttt aattgagacg
     8101 tttttataaa ctccgccgcc aagattatct gcttttcctt gcagtacggc gttgatggcc
     8161 tcgcttaact cgtcatcttt tatcgtgtgg gacttcgctt ctctgttaaa ccacctggtt
     8221 ttgaagattc gcatcaggtt gacatcctgt aatctaaagt atagcaccag gtgatacact
     8281 atgtcttacc ttttggtttt acacgcagcg agagaagata attctcaacg ctcgaccagc
     8341 ctcgcaaaat gcagcgcaac aatgtcagtt gctaaaacgt taatcagatc acattttgta
     8401 atgttacact gcgtggattt tccgcactaa aacgacgcag gtaaccacaa tgaatgaaaa
     8461 tatcgcagaa aaattccgcg ctgatggggt tgccaggcct aactggtcag ccgtttttgc
     8521 cgtggcgttt tgtgtcgcct gcctgattac cgttgagttt ttgcccgtta gtctgttgac
     8581 gccgatggcg caggatctgg ggatctccga gggcgtcgcc ggtcagtcgg tcaccgttac
     8641 ggcgtttgtc gcgatgtttt ccagcctgtt cattacccag attattcagg cgaccgacag
     8701 gcgttatatc gttattctgt tcgccgtttt gctgacggct tcttgtctga tggtctcctt
     8761 tgccaacagc tttacgctgc tattgctggg ccgcgcctgt cttgggttgg cgctgggcgg
     8821 attctgggcg atgtcggcgt cgctgaccat gcgactggtt cccgcgcgta ccgtgccgaa
     8881 agcgctgtcg gtgatttttg gcgcggtctc catcgcgtta gtgatcgccg cgccgctggg
     8941 cagttttttg ggcggtatta ttggctggcg taatgtcttt aacgccgctg cggtgatggg
     9001 cgtactgtgc gtcatctggg tggtgaaatc actgccgtcg ctgccgggcg aaccttctca
     9061 ccagaaacag aatatgttta gcctgttgca acgccctggc gtgatggccg ggatgatcgc
     9121 catctttatg tcttttgccg ggcagttcgc tttctttacc tatattcgcc cggtctatat
     9181 gaatctggcg ggctttgacg ttgatggtct gacgctggtg ctgctaagtt ttggtattgc
     9241 cagcttcgtt ggcacttctt tctcctctta cgtcctgaaa cgttcggtaa aactggcgct
     9301 ggccggtgcg ccgctgctac tggcgctgag cgcgctgacg ctcattgtgt ggggaagcga
     9361 caaaaccgtg gcggcggcaa tagcgattat ctggggactg gcgtttgcgt tggtgccggt
     9421 gggatggtca acgtggatca ctcgttctct tgccgatcag gcggaaaaag ccggttccat
     9481 ccaggtcgcg gtgattcaac tggcaaatac ctgtggcgcg gcggtgggcg gttatgcgct
     9541 cgacaatttc gggctgcttt cgccgctggc gctttccggc ggtctgatgc tgttgacggc
     9601 gttagtcgtg gcggcgaaag tccgtattac gccaatgagt tgatattgct gccatttgta
     9661 ggccggatac gacgttagtc gttatccggc aataataaac gcttaatcaa aaccgttatg
     9721 ctctgcggtg gcggcaaacc attctccgct ttttttcacc gtgcgcgttt gggtggctaa
     9781 atccagttgt acaaaaccat agcgattttt atagccgttc agccatgacc agttatcgat
     9841 aaaggtccac atgtggtagc caagacagtg acagccctcg ctaatgcctt tatgcagcca
     9901 tttaagatgc tcagagataa agtcaatccg gtaatcatcg tgaatctgtc ccgcttgcac
     9961 aaaacgctgc tcgttctcaa cgcccatccc gttttcggag ataaaacagc gcggattgcc
    10021 gtaattatcc cgcaggttgg tgatgatgtc gtaaattcct ggcgcgtaaa tttcccagcc
    10081 gcggtaaggg ttcatcttgc gccccggcat gtcgtaatag tcaaataacc actccggcat
    10141 aaacggcgct tgcggattca ccgctgtatc acggcatttc acgcggcgcg gctgataata
    10201 gttaatcccc agtaaatcga ttttgccgtc ggcaataagc tgacggtcgc ctggctgaca
    10261 ggcaggcagc tggtcatagg ttttcagcag cgccaccagc tccgccgggt attctccctt
    10321 taataccggg tcaagaaaac tgcggttgaa taacagatcc gcatgatgcg cggcttgcac
    10381 atcggcggga tgctgcgagc gtgggtagga cggcgtcaga ttcagcacta cgccgatttc
    10441 accgtcgtag cg
//
LOCUS       DAGWFR010000141        10384 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.143, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000141 DAGWFR010000000
VERSION     DAGWFR010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 10384)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10384)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10384
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.143"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..702)
                     /locus_tag="MOX77_003535"
     CDS             complement(<1..702)
                     /locus_tag="MOX77_003535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system membrane subunit TssM"
                     /protein_id="HCA3358962.1"
                     /translation="MQKFLSLLFSRRALAIVGVLVLALLVWFVGPLVSFDTLRPLASV
                     GSRVVTIALLLMLLVLWLVNWSMSIIGISVLCLAIGFVTPLLALGDVHPFAPLWVRLT
                     LIGFILLMYALYGLYRLWRALRMDEQLLRRFLHPRGEEVPVAGEIKADLRTVNHIVTQ
                     AIRQLRQLRVDMPGWRKIFEGKRFLYELPWFMVVGSPGDGKTTALLNTGLQFPLAEQM
                     EQTSRILTVPGGGTLH"
     gene            complement(939..1433)
                     /locus_tag="MOX77_003536"
     CDS             complement(939..1433)
                     /locus_tag="MOX77_003536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000803074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358963.1"
                     /translation="MKPLFSVLKSNHNSSSFESPDFVDSKDFYAGIGYDQGKLGAQFE
                     NTCAARMSVALIKSGVKFKGRLLPIKEGKWKGRSIETGAKNLADILSQATVFGKPAVW
                     RDPTKFQTELGNKKGVVFFWKIDGYNGGSGSHIDLIEPTSAGAVCHSHCYFSCKQIWF
                     WELR"
     gene            complement(1465..2214)
                     /locus_tag="MOX77_003537"
     CDS             complement(1465..2214)
                     /locus_tag="MOX77_003537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001769329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358964.1"
                     /translation="MIKKSTYDVSHHSAICGVTGDYYRISATYHIKRSIRVFLIILCC
                     LLPGGVFAGSLINAGLISPDNVNLSIRDFLGFYASDNLQEKDNTLMYVLGVADATEGK
                     TWCGYGQVDSITINHTVLAWLDRYSVKKPDARASVLIEEALVKNFPCQGTEPSVKIAS
                     RSSPVLSLTPDALNLSGNDFFKFWVSGNQLDKLRAGIYLLGVEDATEKKLWCGYDLFK
                     TLTLNEIVYVFLKIKHIKNLILARLSLLWIN"
     gene            complement(2219..3520)
                     /gene="tssL"
                     /locus_tag="MOX77_003538"
     CDS             complement(2219..3520)
                     /gene="tssL"
                     /locus_tag="MOX77_003538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system protein TssL, long
                     form"
                     /protein_id="HCA3358965.1"
                     /translation="MTDSTLTPPAADMMSFLSTTPEHKDSEYETPVHTSQRTELNVIV
                     EDGPDSKLRLAEISAAANPLLAAARPLLCALAAMPAKLDAALVEPYRNLLVREMHLYQ
                     TLCDQANLRREHVLAVRYCLCTALDEAANNTTWGRRGVWAGKSLLVTFHGESEGGIKL
                     FQIIGRLAASFQEHGNVLEVIYHLLGLGFEGRYSVQPDGRKQLDNIRQQLLTQLSQRR
                     DPVMPALSPDFQGAISGRLRRMRRVPVWLSAGIALLAMLTLFGLYSHRMDVQTVTVQQ
                     HIDAIGIKLPPPVPVHKLRLKILLANEIARGLLTVDEDDQHSRVVFRGDAMFVPGQKT
                     VSDAIRPVINKAAREIARVGGAVTVTGHTDSQPIHSAEFPSNLVLSEKRAAEVAALLT
                     SGGVPAGRVHIVGKGDTVPVADNGSKAGRAKNRRVEILVVE"
     gene            complement(3517..4860)
                     /gene="tssK"
                     /locus_tag="MOX77_003539"
     CDS             complement(3517..4860)
                     /gene="tssK"
                     /locus_tag="MOX77_003539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system baseplate subunit TssK"
                     /protein_id="HCA3358966.1"
                     /translation="MSWNDRVVWSEGQFLLPQMFQQQERYLEHVMHYRSLPLTPFFWG
                     FSHYNIDGEALNIGKLILKEASGIFPDGTPFNAPDHTPLPPPLTILPEHLNQQICLAV
                     PVRAPNSEETTFDNNPESLARFSVHEHDIRDANSLGRGAQLLQLSHLRLRLLPEKAVT
                     GAWIGLPLTRITGLNPDGRIDIDHDLIPPIINYQASSLMCTWLSWINDLIRMRADSLA
                     ERLTGSDNHGHEAAEVSDYLLLQILNRFEPLLTHLAKTPLAPEVLYRYLSELAGELST
                     YVRPQTRRPAEYKEYKHLTPYAGLKSLVDEVQFLLNAVLIRGAQRIELKEGTYGILNA
                     VVAPSDLADFSTLVLAIKASMPTDVLLQHFAAQTKIGPSDRLPELIRSHLPGLALQVL
                     PVPPRQIPFQAGYIYYDIRREGALWEHIARYGGMAMHTAGEFPGLETELWGVRDK"
     gene            complement(4864..5400)
                     /gene="tssJ"
                     /locus_tag="MOX77_003540"
     CDS             complement(4864..5400)
                     /gene="tssJ"
                     /locus_tag="MOX77_003540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system lipoprotein TssJ"
                     /protein_id="HCA3358967.1"
                     /translation="MNEWRNPTRWLCAVAMPFALLLLSGCGSSDALPDLESQRLDLSV
                     KASDKVNPDNQKKAAPIEIRVYELKNDAAFTTADYWSLHDNDKSVLTDDLVRRDSFIL
                     RPGEEKKLRRPLNAQTTAIGVLAGYRNLAKSVWRVTYKIPEAPEKAWYSSFIPGKGKV
                     QLEAELEQSAIVITERDK"
     gene            complement(5467..5952)
                     /locus_tag="MOX77_003541"
     CDS             complement(5467..5952)
                     /locus_tag="MOX77_003541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system tube protein Hcp"
                     /protein_id="HCA3358968.1"
                     /translation="MAYDIFLKIDGIDGESMDDKHKNEIEVLSWRWNIHQESTMHAGS
                     GLGSGKVSVTNLDFDHYIDRASPNLFKYCASGKHIPQAILVMRKAGGNPLEYLKYTFT
                     DLIVAVVSPSGSHDGEIASRETVELSFSTVKQEYVVQNQQGGSGGTITAGYDFKANKE
                     I"
     gene            complement(6189..6614)
                     /locus_tag="MOX77_003542"
     CDS             complement(6189..6614)
                     /locus_tag="MOX77_003542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001171576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358969.1"
                     /translation="MQKPILSLNSTCIVGGILWLLPVIVVHADEIVCPAVIHFSQAPI
                     ISSAEGWNVSSRAARMLNDGGFLSSGDPKEQADLKGEDAVVDGKKGHLWEIDPEDNRR
                     GIWFSCSYGQWAVLLARKVQGTVATCWSPDVLPAKLICK"
     gene            complement(6586..6987)
                     /locus_tag="MOX77_003543"
     CDS             complement(6586..6987)
                     /locus_tag="MOX77_003543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001147173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BPSL0067 family protein"
                     /protein_id="HCA3358970.1"
                     /translation="MPYVYANAKALQDTEKVGNHHQCVELIQHYIRVGQASTWQQGAA
                     VFGNKNIEVGTVIATFVNGRYPNHNSGNHAAFFLGQDTGGIWVMDQWKDDIAKPRVSK
                     RYIRKLHNGSVRSDGTYIRMSNNAEAYFIVE"
     gene            complement(7040..8548)
                     /gene="tssC"
                     /locus_tag="MOX77_003544"
                     /pseudo
     CDS             complement(7040..8548)
                     /gene="tssC"
                     /locus_tag="MOX77_003544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459271.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system contractile sheath
                     large subunit"
     gene            complement(8572..9114)
                     /gene="tssB"
                     /locus_tag="MOX77_003545"
     CDS             complement(8572..9114)
                     /gene="tssB"
                     /locus_tag="MOX77_003545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system contractile sheath
                     small subunit"
                     /protein_id="HCA3358971.1"
                     /translation="MAINNSAQKFIARNRAPRVQIEYDVEIYGSEKKIELPFVMAVLA
                     DLAGKPREELPPVTDRKFLDIDIDNFNERMKAIAPRVAFAVPNTLTGEGQLMVDITLE
                     NMDDFSPAQIARKVDALNQLLEARTQLANLQTYMDGKAGAENLVNKLLQDPTLLKTLA
                     NAPKSAATQQGVSADNESAE"
     gene            complement(9178..9468)
                     /locus_tag="MOX77_003546"
     CDS             complement(9178..9468)
                     /locus_tag="MOX77_003546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000175185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3358972.1"
                     /translation="MTLRDPALLTPLLMMFAFSVHGEPPLPQDVQHFLSNAEMCQHLA
                     GEWDSSLPEEDKKDIKKGINTWCPPAKKALPGLREKYKENKEIIKKLSEYDF"
     gene            complement(9554..>10384)
                     /locus_tag="MOX77_003547"
     CDS             complement(9554..>10384)
                     /locus_tag="MOX77_003547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000449792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HCA3358973.1"
                     /translation="GVFMLAGPSGVGKTETALALAEAIYGGEQNLVTINMSEFQEAHT
                     VSTLKGAPPGYVGYGEGGVLTEAVRRHPWSVVLLDEIEKAHHDVHELFYQVFDKGGME
                     DGEGTHVDFKNTTLLLTTNVGSDLISQMCEDPALMPDATGLKEALMPELRKHFPAAFL
                     GRVTVIPYLPLDETSRGVIARLHLDRLVARMGEQHGVTLTYSEELVAHIVACCPMHET
                     GARLLIGYIEQHILPQLSRYWLQAMTEKAAIRQIDIGVNGDEQIVFETTSQEGICQKS
                     "
BASE COUNT         2421 a         2882 c         2532 g         2549 t
ORIGIN      
        1 gtgtagcgtg ccgccacccg gcactgtcag gatgcgcgag gtctgctcca tttgctccgc
       61 cagcgggaac tgcaatccgg tgttcagcag ggccgtggtt ttgccgtcgc cgggactgcc
      121 gaccaccatg aaccacggca gctcatacag aaagcgtttt ccctcgaaga ttttacgcca
      181 gccaggcata tccacccgca actgccgcag ctgccggatg gcctgcgtga caatatggtt
      241 gacggtgcgc aggtcggctt tgatctcgcc tgccaccggt acctcttccc cgcgcggatg
      301 caggaagcga cgcagcagtt gttcatccat acgcagcgca cgccacagcc ggtacaggcc
      361 gtacagcgcg tacatcagca ggatgaaacc aatcagggtc aggcggaccc acagcggcgc
      421 aaacggatgg acatcgccca gggccagcag cggtgtgacg aagccaatcg ccaggcacag
      481 gacactgatg ccgatgatac tcatcgacca gttgaccagc cacagtacca gcaacatcag
      541 caacagggca atggtcacca cccggctgcc cacggaggcc agcgggcgca gggtatcaaa
      601 tgacaccagc ggcccgacaa accagaccag cagcgccaga accagaacgc ccacaatcgc
      661 cagcgcgcgc cgggaaaaaa gcagactgag aaatttttgc attatatttc gactcgccac
      721 ccaataatca gtaacagcaa agcgctgaga ccagaaaaca atctcccgtt accgtaatta
      781 atttaaaaaa aatatagaaa gctcttgaaa aataataaat ccggaagtca aaaatacttc
      841 acggaccctg aacgtgtgtt ttcgtctctc aacccttcag aattccggca ttattacatt
      901 ccatttcact caaatcacac gaacggaatt tcagaatttt agcgtaattc ccagaaccaa
      961 atttgcttac aggaaaaata acagtgtgaa tgacatactg ccccggcact ggtcggctca
     1021 atcagatcga tatgactacc actcccacca ttatatccat caattttcca gaagaagacc
     1081 acaccttttt tattacccag ttctgtctga aatttagtcg gatcacgcca gaccgcaggt
     1141 ttaccgaaaa cagttgcctg cgaaagtata tctgccagat ttttagcgcc tgtttcaatg
     1201 ctccggccct tccacttgcc ctcttttatc gggagaagac ggcctttaaa cttcacacct
     1261 gatttaatta atgccacgct catacgggcc gcacaggtat tttcaaactg agcaccaagt
     1321 ttcccctggt cataaccaat gcctgcatag aaatctttcg aatcaacaaa atcaggactt
     1381 tcaaaagatg atgaattatg attagacttt agcactgaga ataaaggttt cattttttaa
     1441 ctcctgtatc acatgaatat ttaattaatt tatccataat aagctcagcc gcgcgagaat
     1501 taagttcttt atgtgtttta tttttaagaa aacatagaca atttcattta atgttagcgt
     1561 cttaaataaa tcgtatccac accatagttt tttctccgtt gcatcctcca cgccaagcag
     1621 atagataccc gccctgagtt tatccagttg attaccagat acccaaaatt taaaaaagtc
     1681 attacctgaa agattaagcg catccggcgt cagggataac acaggagatg accgggaagc
     1741 aatttttacg gagggttcag tcccctgaca ggggaaattt ttaactaatg cttcctctat
     1801 cagcaccgaa gctcttgcat caggcttttt cacagagtac cgatcaagcc aggccagcac
     1861 agtatggttt attgttatac tgtcaacctg accatatcca caccacgtct taccttctgt
     1921 ggcatccgct acccccaaca catacatcag tgtattatct ttttcctgta agttatcact
     1981 ggcataaaac cccagaaaat cccgtatact gaggttgaca ttatcggggg aaattaatcc
     2041 tgcgttaatc agggacccgg caaaaacgcc accgggtaac aggcaacata agatgatcaa
     2101 aaaaacacgg atagatcgtt ttatgtgata tgtcgctgag atccgataat aatcccccgt
     2161 cacgccacat attgccgaat gatgagacac atcataggtc gattttttta tcattcattc
     2221 actccactac cagaatttcc acccgacggt ttttcgcccg cccggcttta ctgccgttat
     2281 ccgccaccgg caccgtatcg cccttgccga cgatatgtac ccgtccggca ggtacgccgc
     2341 cggaggtcag caacgccgca acttccgccg cccgtttttc cgatagcacc aggttggatg
     2401 ggaattcagc cgaatgaatg ggctggctgt cagtgtgacc cgttacagtg actgcgccgc
     2461 ccacgcgggc gatttcccgc gccgctttgt taatcactgg ccggattgcg tcactcaccg
     2521 ttttttgtcc cggtacaaac atggcgtcgc cacggaagac caccctactg tgctggtcat
     2581 cttcgtccac ggtcagcagg ccacgggcga tttcgtttgc cagcaggatt ttcagccgca
     2641 gcttatgaac cggcacgggc ggcggcagtt ttataccaat cgcatcaata tgctgttgta
     2701 cggtgacggt ctgcacatcc atccggtggc tgtaaaggcc aaacagcgtc agcatcgcca
     2761 acagggctat cccggcgctc agccagaccg gcacccggcg catccgccgc agtcgtccgc
     2821 ttatcgcccc ctgaaagtca ggcgagagcg cgggcatgac cggatcgcga cgctgtgaaa
     2881 gctgtgtcag cagttgctga cgaatattgt ccagttgctt acgcccgtct ggctgcacgc
     2941 tgtagcggcc ttcaaatccc agccccagca ggtggtagat aacctccagt acgttgccat
     3001 gttcctggaa gctggccgcc agacgcccga tgatctggaa aagttttatc ccgccttcgc
     3061 tttcaccatg aaatgttacc agcaggcttt ttccggccca gacgccgcgc cgcccccagg
     3121 ttgtgttatt ggcggcttca tcaagcgccg tacacaggca gtaacgtacc gccagtacgt
     3181 gctcgcgccg caggttcgcc tgatcgcata atgtctggta cagatgcatc tcgcgtacca
     3241 gcagattacg gtaaggctct accagggccg catccagttt agcgggcatg gctgcgagag
     3301 cgcacaataa aggccgggca gcggcgagca acgggttagc cgccgcgctg atttcagcca
     3361 gccggagttt gctgtccgga ccgtcttcaa cgatgacatt gagttccgtg cgctggctgg
     3421 tgtgtaccgg cgtttcatat tcactgtcct tatgttccgg cgtggtggac aaaaaggaca
     3481 tcatgtccgc cgctggcggc gtcagggtac tgtctgtcat ttatcgcgca ctccccacag
     3541 ttctgtctcc agccccggaa attccccggc ggtatgcatg gccatcccgc cgtaacgggc
     3601 aatgtgttcc cacaatgctc cctcgcggcg gatgtcgtaa tagatgtatc cggcctgaaa
     3661 cgggatttgg cgcggtggta caggcagaac ctgcaaagcc agccccggca gatgcgagcg
     3721 gatcagttcc ggcaggcgat cggatggccc gattttggtc tgggcggcaa aatgttgcag
     3781 tagcacatcg gtcggcattg aagcctttat cgccagtacc agcgtgctga aatcggcaag
     3841 atcggaaggg gccaccaccg cattcaggat accgtaagtc ccctctttca gctcgatgcg
     3901 ctgcgcgccc cggatcagta ccgcgttcag caggaactgc acctcatcaa ccagcgattt
     3961 caacccggca tagggcgtca ggtgtttgta ctctttgtat tcagcgggcc gtcgcgtttg
     4021 tggacgcaca taggtggaga gttccccggc cagttcggac aggtagcgat acaacacttc
     4081 cggggccagc ggggttttcg ccaggtgagt cagcagcggc tcaaagcgat tgagaatttg
     4141 cagcagcagg taatcggaga cctccgctgc ttcatggccg tggttgtcgc tgccggtcag
     4201 ccgttccgcc agcgaatcgg cccgcatccg gatgagatcg ttgatccacg acagccaggt
     4261 acacatcagt gaactggcct gataattaat gatgggcggg atcaggtcgt ggtcgatatc
     4321 tatccgcccg tcagggttca acccggtgat gcgggtcaac ggcaggccaa tccaggcgcc
     4381 cgtcaccgcc ttttccggca gcagccgcag gcgcagatga ctgagctgta ataactgcgc
     4441 gccacgtccc agcgagttgg cgtcgcggat gtcgtgttca tgtaccgaga aacgcgccag
     4501 tgattccggg ttattgtcaa acgtggtttc ttcgctgttc ggcgcgcgta ccggtaccgc
     4561 cagacaaatc tgctggttca ggtgctccgg caggatggtc agcggcggcg gcagcggggt
     4621 gtggtccggt gcgttaaacg gcgtgccgtc aggaaaaatc cctgatgcct ctttcagtat
     4681 cagtttaccg atgttcagcg cttcgccatc aatattgtag tggctgaatc cccagaaaaa
     4741 gggagtcagc ggcaggctgc ggtaatgcat gacgtgttcc agataacgct cttgctgctg
     4801 aaacatctgc ggcagtaaaa attgtccttc actccagact acgcggtcat tccagctcat
     4861 aattcattta tcccgttccg taattacaat ggcgctttgt tccagttccg cctccaactg
     4921 cacttttcct ttccccggta tgaagctgct gtaccaggct ttttccgggg cttccgggat
     4981 tttgtaggtt acccgccaga ccgatttggc caggttacgg tatccggcca gtacgccgat
     5041 tgccgtggtc tgcgcattca gcgggcgacg cagttttttc tcttcgccgg gacgcaaaat
     5101 aaagctgtcg cgacgcacta aatcgtcggt aaggacggat ttgtcgttgt catggagcga
     5161 ccagtaatca gctgtcgtga aagcggcgtc attttttagt tcataaacac gtatctcaat
     5221 gggcgcggcc ttcttctgat tgtcaggatt caccttatcg gaggctttca cgctcaggtc
     5281 gagtcgctgt gattcgaggt caggtaacgc atcgctactg ccgcatccgg aaagcaggag
     5341 cagtgcaaaa ggcatagcta ccgcacataa ccaccgagtg gggttacgcc attcattcac
     5401 tgtaaattcc tttaaaatca aaacaataaa tccggccaga tataaatctg gccggaaaaa
     5461 cagccgttaa atttctttgt tcgccttgaa gtcgtaacct gcggtgatag tgccgccgct
     5521 gccgccctgc tggttctgca ccacgtattc ctgtttcaca gtgctgaaag aaagctcgac
     5581 cgtttcacgg gaggcgattt caccatcgtg gctgccgctc ggggaaacca cggcgacaat
     5641 caggtcggtg aaggtatact tgaggtactc cagcggattg ccgccagcct tacgcataac
     5701 cagaatggcc tgcggaatgt gcttgccgga ggcgcagtat ttgaacaggt tcgggctggc
     5761 gcgatcgata tagtgatcaa aatccagatt agtgacggag accttaccgg agccgaggcc
     5821 gctaccggcg tgcatggtgg attcctgatg aatattccag cgccagctca gtacttcaat
     5881 ttcatttttg tgtttgtcat ccattgactc gccatcaatg ccgtcaattt ttaaaaaaat
     5941 gtcataagcc atttttatat ccttattaag ttttacttaa aataaacctg gtttatcctg
     6001 ataatttgcg cagaaataaa ccgttgccgt acagaatccc cttccccgta atttcaggag
     6061 aacagaaggc tgtctttttc cgctgccaat attattgaag tatttacttc acgaataaat
     6121 cttaaacatt aacaggcatc ttttatgcgt attctggcat cagagtattc atataaagat
     6181 tatatatttt atttacaaat caatttcgcc ggtaagacat ccgggctcca gcatgtcgca
     6241 accgttccct gaacttttct ggcaagcaga acagcccact gtccataact acacgagaac
     6301 cagatccccc ggcgattatc ctctgggtct atctcccaca ggtgcccctt tttcccatca
     6361 acgactgcat cttcaccttt cagatctgcc tgctctttgg gatcgccaga cgaaagaaaa
     6421 ccaccatcat tcaacatacg cgctgcacgg gatgagacat tccatccttc cgctgaggaa
     6481 attattggag cctgagaaaa atgaataacc gcagggcaga caatctcatc ggcatgaaca
     6541 actattaccg gaagtaacca cagaatgccc ccgacaatac aggtgctatt caacgataaa
     6601 ataggcttct gcattattac tcatccttat ataagtcccg tcactacgaa cacttccatt
     6661 atgcaacttt cttatataac gtttggacac acggggtttt gcgatatcat ctttccattg
     6721 atccatcacc catatcccgc cagtatcttg ccccaaaaaa aatgcagcat ggttgccact
     6781 attgtggttc ggatatcgcc cattcacaaa agtagcgata actgtcccga cttcaatgtt
     6841 tttgtttcca aatactgcgg ccccttgctg ccatgtactc gcttgtccta ctcgtatata
     6901 gtgttgaata agttcaacac actgatggtg gtttcctacc ttttctgtat cctgtaaagc
     6961 ctttgcatta gcataaacat atggcatata ttctcttaat atcctctgat attatttata
     7021 cattcacaaa ataaatgcat caggcattgc cctgcttcac tgacggcagt tttgtcacca
     7081 ggcgcagcga tcctgtcagc ccttcaagct ggaaatgcgg acgcaggaag aatttcgcgt
     7141 cgtaataacc tggattgcct tccacctctt ccaccactac ctccgcggca gccagcggac
     7201 gacgggcttt ggtttcttgc gaggagttca ccggatcggc gtcgacataa ttcataatcc
     7261 attcatttag ccagcgctgc atatcctcgc gctctttaaa ggaaccgatt ttgtcgcgga
     7321 cgatacattt gaggaagtgc gcgaagcgcg agcaggcgaa caggtacggc agacgggcgg
     7381 acaggttagc gttagccgtc gcgtccggat cgtagtattc ctgtggtttt tgcagcgatt
     7441 gtgcgccgat aaaggcggca tagtctgagt ttttacggtg gatcaacggg ataaaaccgt
     7501 ttttcgccag ttcagcctcg cggcggtcag agatggcgat ttcggtcggg catttcatgt
     7561 ccacgccgcc atcgtcagtc gggaaggtat ggcagggaag attttccacc gcaccgcctg
     7621 attccacacc gcgaatcaac gtacaccagc cgtagtgttt gaaggaacgg ttgatgttta
     7681 cgcccatcgc gtaggccgcg ttgctccaga cgtatttggt atggtcagaa ccatccgcat
     7741 cttcttcaaa atcaaactcg tccaccgggt tggtttttgc gccatacggc aggcgggcaa
     7801 gaaaacgcgg catcgtcagg ccaatataac gggagtcttc gctagcccgc agcgagttcc
     7861 acggcgcata ttccaggttc tgggtgacga ttttggtcag gtcgcgggga ttcgccagct
     7921 cctgccagga gtccatttgc agtaccgagg gggaagcccc ggcaataaac ggcgcatggg
     7981 ccgacgcggc gactttggcg atagagccaa gcagatccac atcgggcggt gtatggtcga
     8041 agtagtaatc cgcaatgata cagccataag gttcgccgcc taactggccg tattcggctt
     8101 catacagttt cttgaacatc gggctttgat cccaggcggt gcccttgtaa cgcttcatgt
     8161 tgcgccgcaa ttcatctttt gacagattca tgaagcgaat tttcagcttt tcgtcggtct
     8221 cggtgttgta aaccagatgc tccataccgc gccacgagga ttccagcttc tgccagtcgg
     8281 gatgttgcag gatcagtttg atctgttcgg tcagtttaaa gtcgatctgc gcaataatag
     8341 cgctgatgct tttataggcg tcatcgctga cggtgatcgt gttcgccagc gcctgttgcg
     8401 ccagcgtcta caccgcggct tccacagctt ttgccgcctg ggtagtcttg ggtcggaagg
     8461 cctgattcag caacgcatca aattcaccgg atgcggagac ggtatcctga gcaaccgcgt
     8521 cggttgcctg catattactg tttgccatga aaattcctta aaaattcgac attattccgc
     8581 tgattcatta tccgctgaca caccttgctg ggtagcggcc gatttcggcg cattcgccag
     8641 cgttttcagc agagtcgggt cctgcaacag tttattgacc agattttccg ccccggcctt
     8701 gccatccatg taggtctgga ggttcgccag ttgagtgcgg gcttccagta actggttcag
     8761 ggcgtccacc ttgcgggcaa tctgtgccgg cgaaaagtcg tccatatttt ccagggtgat
     8821 atcgaccatc aactgacctt cacccgtcag cgtattcggc acagcgaacg ccacgcgcgg
     8881 cgcaatggct ttcatgcgct cattgaagtt atcaatatca atatcgagga atttgcgatc
     8941 cgtcaccggc ggcagttctt cacgcggttt cccggccaga tcggccagca ccgccatcac
     9001 gaacggcagc tcgatttttt tctcggaacc gtaaatctct acgtcatatt caatctgcac
     9061 gcgcggcgcg cggttgcgcg cgatgaattt ctgcgcgcta ttgttgatag ccataatcct
     9121 tcatttcctt tttagtcaac tggttgccgc aaggggagcg gtataccggt acagttttta
     9181 aaaatcatac tcagagagtt tttttataat ctctttgttt tctttgtact tttcccgtaa
     9241 cccaggaagt gcttttttcg ccggagggca ccaggtatta atgccctttt ttatgtcttt
     9301 tttatcctct tccggtaaag aactgtccca ttcgccggcc agatgctggc acatctctgc
     9361 attgctcaga aaatgctgca catcctgtgg taaaggcggt tcgccatgaa cactgaaagc
     9421 gaacatcatt agcaaaggag tcaataacgc cgggtcacgt aatgtcatat ttaatgccca
     9481 tcaattgacc agtggggttt atctgtattt ccgccgacaa acttagtcac gccataaacc
     9541 cactgcgcac cacttaactc ttttggcata ttccctcctg cgaggttgtc tcaaaaacaa
     9601 tctgctcatc accattaacg ccgatatcaa tctgcctgat agcggctttt tccgtcatgg
     9661 cctgcaacca gtagcgcgac agttgtggca ggatgtgctg ttcgatgtag ccaatcagca
     9721 accgcgcgcc cgtttcatgc attggacagc acgccacaat atgtgcgacc agttcctcac
     9781 tatacgtcag cgtcaccccg tgctgttcac ccatccgcgc caccagccgg tcaagatgca
     9841 gacgggcaat cacgccacgc gacgtttcat ccagcggcag gtaagggatc accgtcacgc
     9901 ggcccagaaa tgccgccggg aaatgcttgc gcaattccgg cattagcgcc tctttaagcc
     9961 ccgtagcatc gggcattaag gccggatctt cacacatctg gctgatgagg tcggaaccta
    10021 cattggtggt gagtagtagc gtggtgtttt tgaaatcgac atgtgttccc tcaccgtcct
    10081 ccatcccgcc cttgtcaaac acctgataga agagttcatg gacgtcatgg tgcgcttttt
    10141 cgatctcgtc gagcagcact acgctccagg ggtgacgacg caccgcttcc gtcagcacac
    10201 caccctcgcc atagcccaca tagccgggcg gcgcgccttt cagtgtggaa acggtgtgag
    10261 cctcctggaa ctcgctcata ttgatggtta ccaggttctg ctcaccgccg tagatagcct
    10321 ccgccagcgc cagcgcggtt tcggttttac cgacaccgga cggcccggcc agcataaaca
    10381 cgcc
//
LOCUS       DAGWFR010000142        10286 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.144, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000142 DAGWFR010000000
VERSION     DAGWFR010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 10286)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10286)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10286
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.144"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..475)
                     /locus_tag="MOX77_003548"
     CDS             complement(<1..475)
                     /locus_tag="MOX77_003548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen fixation protein FixB"
                     /protein_id="HCA3358974.1"
                     /translation="MNKFSSVWVFSDTPSRLPELMSGAQAVGEKVNAFVLNEADSATA
                     CHLGADHVWLLSGKPEDRMIEDYAAAMAETIRQHSEGGAVLLPNTRRGKLLAAKLGYR
                     LSAAVSNDASDVSLQDGKAAVKHMVYGGLAIGAETIASPFAVITLSSGTFDAQQPD"
     gene            complement(491..1261)
                     /locus_tag="MOX77_003549"
     CDS             complement(491..1261)
                     /locus_tag="MOX77_003549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein FixA"
                     /protein_id="HCA3358975.1"
                     /translation="MKIITCYKCVPDEQDIAINNADGTLDFSKADSKISQYDLNAIEA
                     ACQLKQQLGDAQVVAMSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQHTAT
                     ALAAAAQKSGFDLLICGDGSSDLYAQQVGLLVGEALNIPAINGVSKILSLTDSTLTVE
                     RELEDEVETLSIPLPAVIAVSTDINTPQIPSMKAILGAAKRPVQVWSPADIGLNSVPA
                     YSTQQVAAPKQRERQRVVIEGDGEEQIAAFVENLRKII"
     gene            1742..3259
                     /gene="caiT"
                     /locus_tag="MOX77_003550"
     CDS             1742..3259
                     /gene="caiT"
                     /locus_tag="MOX77_003550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-carnitine/gamma-butyrobetaine antiport BCCT
                     transporter"
                     /protein_id="HCA3358976.1"
                     /translation="MKNEKRKSGIEPKVFFPLLIIVGILCWLTVRDLDAANVVINAVF
                     SYVTNVWGWAFEWYMVVMLFSWFWLVFGPYAKKRLGDEKPEFSTASWIFMMFASCTSA
                     AVLFWGSIEIYYYISTPPFGLEPNSTGAKEIGLAYSLFHWGPLPWATYSFLSVAFAYF
                     FFVRKMDVIRPSSTLVPLVGEKHAKGLFSTIVDNFYLVALIFAMGTSLGLATPLVTEC
                     MQWLFGIPHTLQLDAIIITCWIILNAICVACGLQKGVRIASDVRSYLSFLMLGWVFIV
                     SGASFIMNYFTDSVGMLLMHLPRMLFYTDAIGKGGFPQGWTVFYWAWWVIYAIQMSIF
                     LARISRGRTVRELCFGMVMGLTASTWILWTVLGSNTLLLMDKNILNIPQLIEQHGVAR
                     AIIETWAALPLSTATMWGFFILCFIATVTLINACSYTLAMSTCREVRDGEEPPLLVRI
                     GWSVLVGIIGIVLLALGGLKPIQTAIIAGGCPLFFVNIMVTLSFIKDAKVHWKDK"
     gene            3294..4436
                     /gene="caiA"
                     /locus_tag="MOX77_003551"
     CDS             3294..4436
                     /gene="caiA"
                     /locus_tag="MOX77_003551"
                     /EC_number="1.3.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crotonobetainyl-CoA dehydrogenase"
                     /protein_id="HCA3358977.1"
                     /translation="MDFNLNDEQELFVAGIRELMASENWEAYFAECDRDSVYPERFVK
                     ALADMGIDSLLIPEEHGGLEAGFVTVAAVWMELGRLGAPTYVLYQLPGGFNTFLREGT
                     QEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRKNGKVYLNGSKCFITSSA
                     YTPYIVVMARDGASPDKPVYTEWFVDMSKAGIKVNKLEKLGLRMDSCCEITFDDVELD
                     EKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCTFEDAARYANQRVQFGEAIGRF
                     QLIQEKFAHMAIKLNSMKNMLLEAAWKADNGTITSGDAAMCKYFCANAAFEVVDTAMQ
                     VLGGVGIAGNHRITRFWRDLRVDRVSGGSDEMQILTLGRAVLKQYR"
     gene            4548..5765
                     /gene="caiB"
                     /locus_tag="MOX77_003552"
     CDS             4548..5765
                     /gene="caiB"
                     /locus_tag="MOX77_003552"
                     /EC_number="2.8.3.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-carnitine CoA-transferase"
                     /protein_id="HCA3358978.1"
                     /translation="MNHLPMPTFGPLAGVRVVFSGIEIAGPFAGQMFAEWGAEVIWIE
                     NVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETTDIFIEASKGPAFA
                     RRGITDEVLWEHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQP
                     MPAFPYTADYFSGMTATTAALAALHKVRETGKGESIDIAMYEVMLRMGQYFMMDYFNG
                     GEICPRMTKGKDPYYAGCGLYKCADGYIVMELVGITQINECFKDIGLAHILGTPEVPE
                     GTQLIHRVECPYGPLVEEKLDAWLAAHTIADVQARFAELNIACAKVLTIPELEGNPQY
                     VARESITQWQTMDGRTCKGPNIMPKFKNNPGKIWRGMPSHGMDTAAILKNIGYSEADI
                     KELVGKGLAKVED"
     gene            5828..7381
                     /gene="caiC"
                     /locus_tag="MOX77_003553"
     CDS             5828..7381
                     /gene="caiC"
                     /locus_tag="MOX77_003553"
                     /EC_number="6.2.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crotonobetaine/carnitine-CoA ligase"
                     /protein_id="HCA3358979.1"
                     /translation="MDIVGGQNLRQMWDDLAGMYGDKTALIFESCEGIVRQFSYASLN
                     EEINRTANLFYYLGIRKGDRVALHLDNCPEFIFCWFGLAKIGAIMVPINARLLGEESA
                     WILQNSQVSLLVTSAQFYPMYREIRQDNSTPLNHICLIGEQLPADDGVSHFSQLQARQ
                     SATLCYTPALSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQIALRDDDVYM
                     TVMPAFHIDCQCTAAMPAFSAGSTFVLLEKYSARAFWDQVRKYQATVTECIPMMIRTL
                     MVQPATPTDRQHHLREVMFYLNLSAQEKDAFTERFGVRLLTSYGMTETIVGIIGDRPG
                     DKRRWPSIGRVGFSYEAEIRDDQNRPLPAGEIGEICIKGIPGKTIFKEYYMQPEATAR
                     ALEPEGWLHTGDSGYQDEDGYFYFVDRRCNMIKRGGENVSCVELENIISAHPKIQDIV
                     VVGIKDAIRDEAIKAFIVLNEGETLSEAEFFSFCENNMAKFKVPSFMEIRTDLPRNCS
                     GKIIKKNLK"
     gene            7435..8220
                     /gene="caiD"
                     /locus_tag="MOX77_003554"
     CDS             7435..8220
                     /gene="caiD"
                     /locus_tag="MOX77_003554"
                     /EC_number="4.2.1.149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crotonobetainyl-CoA hydratase"
                     /protein_id="HCA3358980.1"
                     /translation="MSESLHLTRNGPILEITLDRPKANAIDAKTSFAMGEAFLNFRDD
                     PELRVAIITGGGEKFFSAGWDLKAAAEGEAPDADFGPGGFAGLTEIFDLDKPVIAAVN
                     GYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIVNEMVM
                     TGRRMSAEEALRWGIVNRVVSQSELMESARELAQQLVNSAPLAIAALKEIYRATSEMP
                     VEEGYRYIRSGVLKHYPSVLHSEDALEGPQAFAEKRAPVWKGR"
     gene            8332..8928
                     /gene="caiE"
                     /locus_tag="MOX77_003555"
     CDS             8332..8928
                     /gene="caiE"
                     /locus_tag="MOX77_003555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carnitine operon protein CaiE"
                     /protein_id="HCA3358981.1"
                     /translation="MSYYAFEGLIPVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLR
                     GDYGRLILEAGSNLQDGCIMHGYCDTDTIVHENGHIGHGAILHGCVVGRDALVGMNSV
                     IMDGAVIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLRQVTDQELHWKRLNTKEYQ
                     DLAIRCRTGLSETKPLTQVEENRPRLKGTTDVKPKSAQ"
     gene            complement(9006..9401)
                     /gene="caiF"
                     /locus_tag="MOX77_003556"
     CDS             complement(9006..9401)
                     /gene="caiF"
                     /locus_tag="MOX77_003556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carnitine metabolism transcriptional regulator
                     CaiF"
                     /protein_id="HCA3358982.1"
                     /translation="MCEKYVERPLYLLIADWMMAENRWITAREISRQFDIEHCKAINT
                     LSYILSEVGEIVCEVKMIPNQIAGRGCQCQRLVKVVSIDSQLYRRLNHNLQERKVSVA
                     KAPRLSAVPPTELNREQKWQMMLSKSMRR"
     gene            complement(9675..>10286)
                     /gene="carB"
                     /locus_tag="MOX77_003557"
     CDS             complement(9675..>10286)
                     /gene="carB"
                     /locus_tag="MOX77_003557"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459072.1"
                     /note="four CarB-CarA dimers form the carbamoyl phosphate
                     synthetase holoenzyme that catalyzes the production of
                     carbamoyl phosphate; CarB is responsible for the
                     amidotransferase activity; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl phosphate synthase large subunit"
                     /protein_id="HCA3358983.1"
                     /translation="SLTEQGVTQEIIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGE
                     VMGVGRTFAEAFAKAQLGSNSTMKKQGRALLSVREGDKERVVDLAAKLLKQGFELDAT
                     HGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTAGRRAIEDSRVIRRS
                     ALQYKVHYDTTLNGGFATTMALNADATEKVTSVQEMHAQIKKS"
BASE COUNT         2476 a         2664 c         2681 g         2465 t
ORIGIN      
        1 catccggctg ttgtgcgtca aacgttccgc tgctgagtgt gatcacggca aacggcgaag
       61 cgatggtctc tgcccctatc gccagaccgc cgtagaccat atgtttgacc gccgcttttc
      121 catcctgcag ggagacgtcg ctggcgtcgt tggaaaccgc agccgacaag cgatagccca
      181 gttttgccgc caacagcttg ccccgacgcg tattcggcag cagcaccgcg ccgccctcgc
      241 tatgctgacg aatagtctca gccatcgcag cagcgtagtc ttcgatcatg cgatcttctg
      301 gtttgccgct gagcagccag acatgatccg cgcccaaatg acatgctgtc gcgctgtccg
      361 cttcgttcag tacgaacgcg ttaacttttt cacctacagc ctgcgcacca ctcatcagtt
      421 cgggcagacg agaaggggta tcgctgaata cccagacact ggaaaatttg ttcataacat
      481 cccctgataa ttaaatgatt ttgcgcagat tctcgacaaa cgcggcgatt tgttcttcac
      541 cgtcaccttc aatcaccaca cgctgacgct cgcgctgctt cggtgcggca acctgttgtg
      601 tggaatacgc gggtacgctg ttcagcccga tatccgcagg cgaccagacc tgaaccggtc
      661 ttttcgccgc gccaagaatg gctttcatcg aagggatttg tggggtgtta atgtcggtgg
      721 aaaccgcgat caccgccggg agcgggatgc tcagcgtttc aacttcatct tccagttcgc
      781 gttctaccgt caatgtgctg tcggtaagag agaggatttt actcacgccg ttaatcgccg
      841 gaatgttcag cgcttcgccc accagcaaac caacctgctg agcataaaga tcggaagaac
      901 cgtcgccgca gataagtaga tcgaaacctg atttttgcgc cgcggcggcc agcgcggtag
      961 cggtgtgttg cggcagcgcc tgctcaaatt gatcgtcaat gaccacaatc agttcatcag
     1021 ggccacgaga gaggacatct ttgcgccctt ttgcattagt cagcgctttg ccgccaacgc
     1081 tcatggcgac aacctgagcg tctcccaact gctgttttaa ctggcaagca gcttcaattg
     1141 cattcagatc atattggctg attttgctat ccgctttgct gaaatcgagt gttccgtcag
     1201 cattattaat cgcaatatcc tgctcatcag gtacgcattt gtagcaagta attatcttca
     1261 ttgcatctcc agaaatcatg aaggaaacgt atttatatcg gcggtgttaa atacagatat
     1321 cacgctcttt aattcggaaa taaaacctta atcaccaata ttgaaaatgt cacacattga
     1381 tattcgtaac tttcaatagt gttacgcacc tcaccaatat tgaaagaaat atgccaaata
     1441 tgaaaatttt caatattgtt tgctggctca acaatattga acgccagata cttaaaaaag
     1501 ttaaaaaacc acaaccaaca gattgataaa taaagaaaaa atcaaaattt aaacacaaaa
     1561 taatcaacgc aaaaaagtgt gacacagata acagaatcac ccgaaatgaa tacccattat
     1621 gagttactca ttgaggcgtc ccagaggtta aaaacttatc aacaaatcat taataataaa
     1681 taaacaaacg ttcatgaact ggcacgctaa ataaatttcg ttttcacact ggaattcact
     1741 tatgaaaaat gaaaagagaa aatcgggaat tgaaccgaag gttttttttc cgctattaat
     1801 aattgtcggg atactttgct ggctaacagt cagagatctt gatgccgcta acgtcgttat
     1861 taatgcggta ttcagttatg tcaccaacgt ctggggttgg gcatttgaat ggtatatggt
     1921 cgtcatgctc ttcagctggt tctggctggt ttttggcccc tatgccaaaa agagattagg
     1981 tgacgaaaaa ccggagttta gcaccgccag ctggattttc atgatgttcg cctcctgtac
     2041 atccgctgcg gttctgttct ggggctctat tgagatctac tactatatct ccaccccgcc
     2101 gttcggcctg gaacccaatt ccacgggcgc gaaagagata ggcctggcgt acagcctgtt
     2161 ccactggggg ccgctaccgt gggcaaccta tagcttcctt tccgtggcct tcgcctactt
     2221 cttctttgta cgcaagatgg atgtcatccg ccccagctcc acgctggtac cgctcgtcgg
     2281 tgaaaagcat gcgaaagggt tgttcagtac catcgtcgat aacttctacc tggtggcgct
     2341 gatcttcgcg atgggcacca gcctcggtct ggctaccccg ctggtcaccg agtgtatgca
     2401 atggctgttc ggtattccgc atacgctgca attggatgcc atcatcatta cctgctggat
     2461 cattctgaac gcgatttgcg tggcctgcgg cctgcaaaaa ggggtcagaa tcgccagcga
     2521 tgtgcgtagc tacctgagct tcctgatgct cggctgggtg tttatcgtca gcggcgccag
     2581 cttcatcatg aactacttca ccgactccgt cgggatgctg ttaatgcacc tgccacggat
     2641 gctgttctat accgacgcca tcggtaaagg cggcttccca cagggctgga ccgttttcta
     2701 ctgggcgtgg tgggttattt acgccatcca gatgagtatc ttcctggccc gtatttcccg
     2761 tggtcgtacc gtacgtgaac tgtgcttcgg gatggtgatg ggtctgaccg cgtctacctg
     2821 gatcctgtgg acagtccttg gcagtaacac gctgctgctg atggataaaa acatcctcaa
     2881 catcccgcaa ctgattgagc aacacggcgt ggcgcgcgcc attatcgaaa cctgggcagc
     2941 cttgccgctc agcaccgcca ccatgtgggg cttcttcatc ctctgcttta ttgccaccgt
     3001 cacgctgatt aacgcctgct cttacaccct ggcgatgtcg acctgtcgcg aagttcgcga
     3061 tggtgaagag ccgcctctgt tagtacgcat cggctggtcg gtgctggtcg gcatcatcgg
     3121 tatcgttctg ctggcgctgg gtgggttgaa gccgattcag accgcgatta tcgccggagg
     3181 atgcccgctg ttcttcgtca acattatggt gacgctgtcc tttattaaag acgccaaagt
     3241 gcactggaaa gacaagtaat tcttattaac ccaattgatc aagaggctga aagatggatt
     3301 tcaacttaaa tgacgaacag gagctgtttg tcgccggtat tcgcgaactg atggccagtg
     3361 agaactggga agcttatttt gccgagtgcg atcgtgacag cgtctaccct gagcgttttg
     3421 taaaagcgct ggcggatatg ggtattgata gcctgctgat cccggaagaa cacggcggtc
     3481 tggaagcggg ttttgttacc gtcgccgccg tctggatgga actgggacgt cttggcgcgc
     3541 caacttacgt gttgtaccaa ttgccgggag gttttaacac tttcctgcgt gaagggactc
     3601 aggagcaaat tgataaaatc atggcgttcc ggggcaccgg taagcagatg tggaactctg
     3661 ctatcaccga accgggagcg ggatcggatg ttggtagtct gaaaaccact tatacacgca
     3721 aaaatggtaa ggtttatctc aatggcagta agtgctttat caccagtagc gcctataccc
     3781 cgtacatcgt ggtcatggcg agagacggtg catcgccgga taaaccggtt tacaccgagt
     3841 ggtttgtgga catgagcaaa gcgggtatca aggtcaacaa actggagaaa ctcggtctgc
     3901 gcatggatag ctgctgtgaa atcacctttg acgacgttga actggacgag aaagacatgt
     3961 tcggtcggga aggtaacggc ttcaaccgcg tgaaagaaga gtttgaccat gaacgcttcc
     4021 tcgtcgcgct gaccaactac ggtaccgcaa tgtgcacttt tgaagacgct gcgcgttacg
     4081 ctaatcagcg cgtgcagttt ggtgaagcta ttggccgttt ccagctgatt caggagaagt
     4141 ttgcgcatat ggcgatcaaa ctgaactcca tgaaaaatat gctgctggaa gccgcgtgga
     4201 aagcagataa cggcactatt acctccggcg acgcggccat gtgcaaatac ttctgcgcca
     4261 acgccgcgtt tgaagtggta gacaccgcca tgcaggtact gggaggtgtt ggtatcgcgg
     4321 gcaaccaccg catcacgcgt ttctggcgtg acctgcgcgt tgaccgtgtt tctggtggtt
     4381 ctgacgaaat gcagatcctg acgttgggtc gtgcggtact caagcaatac cgctaatcga
     4441 tcccttgtag gcctgataag acgcggggcg tcgccatcag gcaatcatgc cggatggcgc
     4501 tgtgcttatc cggcctacat accgcaaaaa atgccaggag aaaaacgatg aatcatttac
     4561 caatgccaac ctttggtcct cttgctgggg tacgcgttgt tttttcaggg atcgaaatcg
     4621 ccggtccgtt cgccggacag atgttcgccg aatggggcgc cgaggttatc tggattgaaa
     4681 acgtcgcatg ggccgatacc atccgcgtac agcctaacta cccgcagctc tcacgccgca
     4741 acctgcacgc cctgtcgctg aatattttca aagatgaagg tcgggaagcg tttctgaaac
     4801 tgatggaaac caccgatatt ttcattgaag ccagtaaagg cccggccttt gcccgccgtg
     4861 gtattactga tgaagtgctg tgggaacata acccgaaact ggtcattgcc cacctttccg
     4921 gcttcggcca gtatggtacc gaggagtaca ccaatcttcc ggcgtataac accatcgcgc
     4981 aggcattcag tggttatctg atccaaaacg gcgacgttga ccaaccgatg ccagccttcc
     5041 cgtataccgc cgattacttc tccgggatga ccgcgacgac agccgcgctg gcagccctgc
     5101 acaaagtacg cgaaacgggt aaaggtgaaa gcatcgatat cgccatgtac gaagtgatgc
     5161 tgcgcatggg tcagtatttc atgatggact acttcaacgg cggcgaaatc tgtccacgta
     5221 tgacgaaagg gaaagacccc tactacgccg gttgcggcct gtataaatgc gccgatggtt
     5281 acatcgtcat ggagttggtc ggcatcacgc aaatcaacga gtgttttaaa gatattggcc
     5341 tggcgcacat tctcggtacg ccggaagttc cggaaggcac gcagctcatc catcgcgtgg
     5401 aatgccctta cggcccgctc gtcgaagaga aactggacgc ctggctggca gcacatacca
     5461 tcgccgacgt tcaggcgcgt tttgctgagc tgaatatcgc ctgtgcgaag gtgctcacca
     5521 ttccggaact ggaaggtaac ccgcagtacg ttgcccgcga atcgattact cagtggcaaa
     5581 caatggacgg tcgcacctgt aaagggccga acatcatgcc gaaatttaaa aacaacccgg
     5641 ggaaaatctg gcgtggcatg ccatcacacg gcatggatac cgccgccatt ctgaaaaaca
     5701 ttggttatag cgaagcagat attaaggaac tggtcggcaa aggcctggcc aaagttgagg
     5761 attaaacgcg atgcgctact cggttttccg gttagcgctc acgcctgatt tcagtggata
     5821 aagcaatatg gatatcgttg gcggacaaaa cttacgtcag atgtgggacg acctggccgg
     5881 gatgtacgga gataaaacgg cgttaatttt cgaatcctgt gagggaatcg ttcggcagtt
     5941 tagctatgct tcgctcaatg aagagattaa ccgcacggcg aacctttttt attacttagg
     6001 gatccgcaag ggtgataggg tcgcgctgca tctggataac tgtccggaat tcatcttttg
     6061 ctggtttgga ctggcaaaaa tcggcgccat tatggtgccg attaatgccc gcttactggg
     6121 cgaagaaagc gcctggatcc tgcaaaacag ccaggtgagt ctgctggtta ccagcgccca
     6181 gttttatcct atgtaccgtg aaatacgcca ggacaatagc actccgctta atcatatctg
     6241 tctgattggc gagcagcttc cggctgacga cggcgtgagc cacttttccc aactacaagc
     6301 acgccagtcg gccacgctgt gctatacgcc cgcgttatcc actgacgata cggcggaaat
     6361 tctgtttacc tccggtacca cctcgcgtcc aaaaggggtg gtgattaccc actataacct
     6421 gcgctttgca ggctattact ctgcctggca aatcgccctg cgcgatgatg acgtgtacat
     6481 gacggtgatg cccgcttttc atatcgactg ccagtgtacc gccgcaatgc cagccttttc
     6541 cgccggcagc acctttgtgc tcctggagaa gtacagcgcc agggccttct gggatcaggt
     6601 acgtaaatat caggcgacgg tgaccgagtg catcccgatg atgatccgca cgctgatggt
     6661 ccagcccgcc acgccaacgg acaggcagca tcatctgcgc gaagtgatgt tctatctcaa
     6721 tttatccgcg caggaaaaag acgcctttac cgaacgcttt ggcgtcaggc tgctgacctc
     6781 ttatggtatg actgaaacca ttgtcggaat tattggcgac cgtcccggag acaaacgacg
     6841 ctggccttcc attggtcgcg tgggctttag ctatgaagct gaaattcgcg acgatcaaaa
     6901 tcgcccgctg cccgccggag aaattggcga aatctgtatt aaaggcatcc ccggcaagac
     6961 tatcttcaaa gagtattaca tgcagccgga ggcaaccgcc agggcgctgg aaccagaggg
     7021 ctggttacat accggtgatt cgggttacca ggatgaggat ggctatttct attttgtcga
     7081 cagacgctgc aacatgatta aacgcggcgg ggaaaatgtc tcctgcgtcg agctggaaaa
     7141 tattatttct gcgcatccga aaattcagga cattgtggtg gtcggtatta aagacgcgat
     7201 ccgtgatgaa gccattaaag cgtttatcgt ccttaatgaa ggtgaaacat taagcgaggc
     7261 cgagtttttc agcttctgcg aaaacaatat ggcgaaattc aaagttccct cttttatgga
     7321 gatcagaact gacctgccac gcaactgttc aggaaaaata atcaaaaaaa atctgaaata
     7381 aaccttccgg caggaatccc tcccgccggg aaactattta tctggagatg aactatgagt
     7441 gagtcattac atctgacccg taacggcccg atcctggaaa ttaccctcga ccgacctaaa
     7501 gcgaatgcca ttgatgcgaa aaccagtttt gcgatgggtg aagcttttct taatttccgt
     7561 gacgacccgg aattacgcgt agcaatcatt accggcggcg gggagaaatt cttttctgcg
     7621 ggctgggact taaaagcggc agcggaaggt gaagcgccgg atgccgattt tggtcccggc
     7681 ggctttgccg gtttaaccga aatatttgac ctcgataagc cggttatcgc cgcggtgaac
     7741 ggctacgcat ttggtggcgg ttttgagctg gcgctggcgg cagactttat tgtctgcgcc
     7801 gaaaacgcca gcttcgcgct gccggaagcc aagctcggca tcgtgcctga cagcggcggc
     7861 gtattgcgtc tgcctaagct gctgccaccg gctatcgtca acgaaatggt aatgaccggc
     7921 agacgaatga gcgccgaaga agcgctgcgt tgggggatcg tgaaccgcgt tgtcagccag
     7981 agcgaactga tggagagcgc gcgcgaactg gcgcaacaac tggtcaatag cgctccgctg
     8041 gctatcgcgg cgctgaaaga gatttatcgc gcgaccagtg aaatgccggt tgaagaaggc
     8101 taccgctaca tccgcagcgg cgtgctgaaa cattatccgt cggtactgca ttcagaagat
     8161 gcgctcgaag gaccgcaggc atttgccgaa aaacgcgctc cggtgtggaa aggtcgttaa
     8221 tgtgactatg ccggatggcg cttcgcttat ccggcctaca acacatgcac aaccgtaggc
     8281 cggataaggt atttacgccg ccatccgaca aaaaaaaacc gaggtacaac catgagctat
     8341 tacgcctttg aaggactgat cccggtggtg catccggacg cgtttgtcca tcccagcgcc
     8401 gtgctgattg gcgatgtcat cgtgggcgcc ggtgtttata ttggcccact cgcgtcattg
     8461 cgtggggatt atggtcgcct gatcctggag gcaggctcta atctgcagga tggctgcatt
     8521 atgcatggct actgcgatac cgataccatc gtgcatgaaa acggccatat cggccacggc
     8581 gctattctac atggctgcgt ggtgggacgg gatgccctgg tcggcatgaa tagcgtcatt
     8641 atggacggcg cagtgattgg cgaagagagc attgtcgccg ccatgagttt tgtcaaagcc
     8701 ggatttcagg gtgaggcaag gcaactgctg gtgggatcac cggcgcgcgt actacgccag
     8761 gttacggacc aggagctgca ctggaaacgc ctcaatacca aagaatatca ggatcttgcg
     8821 atccgttgtc gaacggggtt atctgaaacg aagccgttaa cgcaggtcga agaaaaccga
     8881 ccgcgcctga aaggcacgac ggacgtgaag ccaaaatcag cacagtaatt gatgccggat
     8941 gcgctcacgc ttatccggcc tacgcgtcaa ttaccgttta ccccgccagc aggttaaaca
     9001 gacaattagc gacgcatact cttggagagc atcatctgcc atttctgctc acggtttagc
     9061 tctgtggggg gaacggcaga cagccgcggc gctttcgcca cgctcacttt tctttcctgc
     9121 aaattatgat tcaatcggcg atagagttga gagtcgatac tcacgacttt caccagacgc
     9181 tggcactggc agcctcgtcc tgcaatttgg ttagggatca tcttcacttc acaaacaatt
     9241 tcccccactt ctgacagaat ataggagagc gtattaattg ctttgcaatg ttcaatatca
     9301 aattgacggg aaatctccct ggcagtgatc catcggttct ctgccatcat ccagtcagca
     9361 attaacaaat aaagcggtct ttcaacatat ttttcacaca taagcacacc atttcacaaa
     9421 ttaaaaatct ggctacggcc tgtccaaact aataaaaact aagccatatt aaaattgtgg
     9481 atatgaaaga tagtatgcga cttaaatatt gattagtgtg agcaatatcg tgcttattac
     9541 attgaaaatg tggttacgga aacggacttc tccaggaatg accttacgca agataaaaaa
     9601 agggtttctt tacagaaacc ctttcaacat tatattacag gttcggttag agcaatatcc
     9661 gccgccccct tggtttacga ctttttgatc tgcgcgtgca tttcctgcac cgaggttacc
     9721 ttctcggtgg catcggcatt gagcgccatc gtcgtggcaa aaccgccgtt cagcgtggtg
     9781 tcataatgca ccttatactg caacgcgctg cggcgaatca cccttgagtc ttcaatcgcc
     9841 cggcggcctg cggtggtgtt gatgatgtag gtatattcgc cattcttgat gcggtcctga
     9901 atgtgcggac gaccttcgtg caccttgttc accagacgcg ggttgatacc ggcttcgccc
     9961 agcacaatcg ccgtaccgtg ggtggcatcc agctcgaagc cttgtttcag cagcttagcg
    10021 gccaggtcca ccacgcgctc tttgtcgcct tcgcgaaccg agagcaacgc acggccctgt
    10081 ttcttcatag tggagttact gcccagctgt gccttggcga acgcttccgc gaaggtacgg
    10141 cccacgccca tcacttcccc ggtggagcgc atttctggcc ctaacagcgg gtcaacgccc
    10201 gggaatttgt tgaacggcag taccacttct ttcaccgagt agtacggcgg gataatttct
    10261 tgagtcacgc cctgctcggt cagcga
//
LOCUS       DAGWFR010000143        10271 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.145, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000143 DAGWFR010000000
VERSION     DAGWFR010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 10271)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10271)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10271
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.145"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..515
                     /locus_tag="MOX77_003558"
     CDS             <1..515
                     /locus_tag="MOX77_003558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cytoplasmic protein"
                     /protein_id="HCA3358984.1"
                     /translation="RQQLADLEARGALPLAAFREAQESAERLQVWARETLGDLAPDFS
                     RLRQLLALLPDVVQTTTPEIPPSPAPAPAPAGTVMDNAIPARAEDVPPVNAPPGISIP
                     HNAEPGPIRDRNDALERLRCIRRWFESSEPSSPTIPLLRQAERLVGKRFSEVINEIPV
                     ELLEKWDALE"
     gene            complement(835..911)
                     /locus_tag="MOX77_003559"
     tRNA            complement(835..911)
                     /locus_tag="MOX77_003559"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(875..877),aa:Asp,seq:gtc)
     gene            complement(1045..1776)
                     /gene="dnaQ"
                     /locus_tag="MOX77_003560"
     CDS             complement(1045..1776)
                     /gene="dnaQ"
                     /locus_tag="MOX77_003560"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="HCA3358985.1"
                     /translation="MSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVINRRLT
                     GNNFHVYLKPDRLVDPEAFGVHGIADEFLLDKPVFADVVDEFLDYIRGAELVIHNASF
                     DIGFMDYEFGLLKRDIPKTNTFCKVTDSLALARKMFPGKRNSLDALCSRYEIDNSKRT
                     LHGALLDAQILAEVYLAMTGGQTSMTFAMEGETQRQQGEATIQRIVRQASRLRVVFAS
                     EEELAAHESRLDLVQKKGGSCLWRA"
     gene            1840..2307
                     /gene="rnhA"
                     /locus_tag="MOX77_003561"
     CDS             1840..2307
                     /gene="rnhA"
                     /locus_tag="MOX77_003561"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HCA3358986.1"
                     /translation="MLKQVEIFTDGSCLGNPGPGGYGAILRYRGHEKTFSEGYTLTTN
                     NRMELMAAIVALEALKEHCEVTLSTDSQYVRQGITQWIHNWKKRGWKTAEKKPVKNVD
                     LWKRLDAALGQHQIKWVWVKGHAGHPENERCDELARAAAMNPTQEDSGYQAEA"
     gene            complement(2304..3026)
                     /locus_tag="MOX77_003562"
     CDS             complement(2304..3026)
                     /locus_tag="MOX77_003562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HCA3358987.1"
                     /translation="MKPARLSQTVVAPGCWGELPWGNYYREALEQQLNPWFAKMYGFH
                     LLKIGNLSAEINSEACAVSHQVNVSSQGSPMQVLADPLHLPFADKSVDVCLLAHTLPW
                     CTDPHRLLREADRVLIDDGWLVISGFNPLSLMGLRKLVLVLRKTPPYNSRMFTLMRQL
                     DWLSLLNFEVLHYSRFHVLPWKKQGGRLLNTHIPALGCLQLIVARKRTIPLTLNPLRH
                     NKSKTPIRQTVGATRQYRKPDG"
     gene            3061..3816
                     /gene="gloB"
                     /locus_tag="MOX77_003563"
     CDS             3061..3816
                     /gene="gloB"
                     /locus_tag="MOX77_003563"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase"
                     /protein_id="HCA3358988.1"
                     /translation="MNLNSIPAFQDNYIWVLTNDEGRCVIVDPGEAAPVLKAIAAHKW
                     MPEAIFLTHHHYDHVGGVKELLQHFPQMTVYGPAETQDKGATHLVGDGDTIRVLGEKF
                     TLFATPGHTLGHVCYFSHPYLFCGDTLFSGGCGRLFEGTPSQMYQSLMKINSLPDDTL
                     ICSAHEYTLANIKFALSILPHDSFINEYYRKVKELRVKKQMTLPVILKNERKINLFLR
                     TEDIDLINEINKETILQQPEARFAWLRSKKDTF"
     gene            3888..5255
                     /gene="mltD"
                     /locus_tag="MOX77_003564"
     CDS             3888..5255
                     /gene="mltD"
                     /locus_tag="MOX77_003564"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase D"
                     /protein_id="HCA3358989.1"
                     /translation="MKAKAILLASVLLVGCQTSQNTGNVQQHAQSLSAAGQGEAGKFT
                     SQARWMDDGTSIAPDQDLWAFIGDELKMGIPENSRIREQKQKYLRNKSYLHDVTLRAE
                     PYMYWIAGQVKKRNMPMELVLLPIVESAFDPHATSGANAAGIWQIIPSTGRNYGLKQT
                     RNYDARRDVVASTTAALDMMQRLNKMFDGDWLLTVAAYNSGEGRVMRAIKANKARGKP
                     TDFWSLSLPRETKLYVPKMLALSEILKNSKRYGVRLPTTDESRALARVRLNSPVEMAQ
                     VADMAGMSISKLKTFNAGVKGSTLGVSGPQYVMVPKKHAEQLRESLASGEIDAVQSQL
                     IADNTPLNSRSYKVRSGDTLSGIASRLGVSTKDLQQWNNLRGSRLKIGQSLTVGAGSS
                     AQRLANNSDSITYRVRKGDSLSSIARRHGVNIKDVMRWNHDTDNLQPGDQLTLFVKDN
                     STPDS"
     gene            complement(5311..6081)
                     /locus_tag="MOX77_003565"
     CDS             complement(5311..6081)
                     /locus_tag="MOX77_003565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HCA3358990.1"
                     /translation="MTTHSHHDNVEKQFGSQANAYLHSAVHAAGRDLARLAQRLSDFS
                     HASVLDMGCGAGHASFVAAQHVNSVVAYDLSASMLEVVAGAAEERHLSNITLRQGYAE
                     KLPFEDASFEVVISRYSAHHWHDVGQALREVYRVLKPGGVLIIMDVMSPGHPVRDIWL
                     QTVEALRDTSHVRNYSSGEWLAMVNNAMLVTNTVITDRLSLEFRSWVTRMRTPAPLVE
                     AIRLYQASAPVEVKRYFELQDDGSFSSDTIMLEAHKAV"
     gene            complement(6159..6959)
                     /locus_tag="MOX77_003566"
     CDS             complement(6159..6959)
                     /locus_tag="MOX77_003566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HCA3358991.1"
                     /translation="MRKNTYAMRYVAGQPAERILPLGSFASIGQALPAGEPLSSEERI
                     RILVWNIFKQQRAEWLSVLKNYGKDAHLVLLQEAQTTPELVQFATANYLAADQVPAFV
                     LPQHPSGVMTLSAAHPVYCCPLREREPILRLAKSALVTVYPLPDTRLLMVVNVHAVNF
                     SLGVDVYSKQLLPIGDQIAHHSGPVIMAGDFNAWSRPRMNALYRFAREMSLRQVRFTD
                     DQRRRAFGRPLDFVFYRGLNVNEASVLVTRASDHNPLLVEFSPGKPEQ"
     gene            complement(7091..8266)
                     /locus_tag="MOX77_003567"
     CDS             complement(7091..8266)
                     /locus_tag="MOX77_003567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3358992.1"
                     /translation="MPLALFALTISAFAIGTTEFVIVGLVPTIAQQLAVSLPSAGMLV
                     LIYALGVAIGAPVLTALTGRLPRKQLLVALMVLFTAGNLLAWQAPGYMTLIAARLLTG
                     LAHGVFFSIGSTIATSLVPKEKAASAIAIMFGGLTVALVTGVPLGTFIGQHFGWRETF
                     LAVSLLGVIALMSSQLLIPANIPGRAAASIRDQVKVLTHPRLLLIYAVTALGYGGVFT
                     AFTFLAPMMQDLAGFSPAAVSWILLGYGVSVAIGNIWGGKLADKHGAVPALKFIFAAL
                     FVLLMVFQVTASTQYAALATILVMGIFAFGNVPGLQVYVVQKAEQFTPNAVDVASGLN
                     IAAFNIGIALGSVIGGQTVAHYGLAQTPWIGALIVLVAFLLMGVSGRLDKPVRIALE"
     gene            8371..9285
                     /locus_tag="MOX77_003568"
     CDS             8371..9285
                     /locus_tag="MOX77_003568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCA3358993.1"
                     /translation="MKATSEELAIFVAVVESGSFSRAAEQLGQANSAVSRAVKKLEMK
                     LGVSLLNRTTRQLSLTEEGERYFRRVQQILQEMAAAETEIMESRNTPRGLLRIDAATP
                     VMLHFLMPLIKPFRERYPEITLSLVSSETFINLIERKVDVAIRAGTLTDSSLRARPLF
                     TSYRKVIASPDYIARFGKPESVEELKQHLCLGFSEPISLNTWPIACSDGQLHEIECGI
                     SSNSGETLKQLCLNGNGIACLSDYMIDKEIARGELVELLADKRLPVEMPFSAVYYSDR
                     AVSTRIRAFIDFLSEYIRTAPAGAVKEG"
     gene            complement(9306..10109)
                     /gene="dkgB"
                     /locus_tag="MOX77_003569"
     CDS             complement(9306..10109)
                     /gene="dkgB"
                     /locus_tag="MOX77_003569"
                     /EC_number="1.1.1.346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,5-didehydrogluconate reductase DkgB"
                     /protein_id="HCA3358994.1"
                     /translation="MTIPAFGLGTFRLKDDVVIASVKTALELGYRAVDTAQIYDNEAA
                     VGQAIAESGVPRNELYITTKIWIENLSKDKLIPSLKESLKKLRTDYVDLTLIHWPSPG
                     DAVSVEEFMQALLEAKKQGLTREIGISNFTIPLMEKAIAAVGADHIATNQIELSPYLQ
                     NRKVVDWAKAHGIHITSYMTLAYGKALKDEVIARIAVKHNATPVQVILAWAMGEGYSV
                     IPSSTRRENLASNLLAQDLHLDAEDKNAIAALDCNDRLVSPEGLAPAWD"
BASE COUNT         2700 a         2673 c         2574 g         2324 t
ORIGIN      
        1 tccgccagca actggcagac ctcgaagccc gtggggcatt accgctagcg gcgtttcgcg
       61 aagcgcagga aagcgcagaa cgcctgcaag tgtgggcgcg tgagacatta ggcgatctgg
      121 ctccagattt ttcacgcctg cggcagttgt tagcgctgct gcctgacgtg gtacagacaa
      181 ccacgccgga aatccctccg tcgccagcgc cagcgccagc tcccgcaggc acggttatgg
      241 ataatgccat tcctgcacgg gcagaggatg tgccgcctgt caacgcgcca cccggtatat
      301 ctatcccaca caatgctgaa ccggggccaa ttcgcgatcg taatgatgcg ctggaacgcc
      361 tgcggtgcat tcgtcgctgg tttgagagca gtgaacccag cagcccgacc atcccactat
      421 tacgtcaggc tgaaagactg gtgggaaaac ggttctcgga ggtgatcaat gagatcccgg
      481 tggagttgct ggagaagtgg gatgccctgg agtgatgatg cgcatgtctg gcggttctcc
      541 gtgattatct gagtgacatc aacattactc ggtctgcttc tgcgctgaac atgtcccgat
      601 cccggttaag caccgccatg aggccgcgcc ttaaatgtca gtgggacaaa ataaccatga
      661 cagtgaaaga agtggcggta atatcctgtt cgtcatccag gcgtaggccc atttgcgcca
      721 gattccacga tagacggtgg aacttcttga agacgaaaaa aaaccgtatc ccttttacag
      781 tgatacggtt tttttacttc acaggatgta taaaaacacc ctgagatttg tatctggcgg
      841 aacggacggg actcgaaccc gcgaccccct gcgtgacagg caggtattct aaccaactga
      901 actaccgctc cgtgatgttc ccgctgggaa cgaggcgaat attacggttt gcggtgtcgc
      961 ccgtcaacgc tttttctcac cttttgaatc agttgctgca aaaatcgccc gaaggatgat
     1021 ttttatagcc taaaaaggaa taaattatgc ccgccaaagg caacttccgc cctttttctg
     1081 caccagatca agccgcgatt catgcgcagc cagctcttcc tcagaggcaa aaacgacccg
     1141 taaccggctg gcctggcgaa cgattcgctg aatggtcgct tcaccttgct gccgttgcgt
     1201 ctctccttcc atcgcaaacg tcatggacgt ttgtccgccc gtcatcgcca gatacacttc
     1261 ggcaaggatc tgggcatcga gcaatgcgcc gtgcaaagta cgtttgctat tatctatctc
     1321 ataacgcgaa cacagcgcat caaggctgtt acgcttgccg gggaacattt tccgcgccaa
     1381 cgccaggcta tcggtaactt tgcagaaagt attggtttta ggaatatcgc gtttaagcag
     1441 accaaactca taatccataa agccgatatc gaacgatgcg ttatggatga ccagctccgc
     1501 gccgcggata taatcgagaa actcatcgac cacatcagca aaaaccggct tatccagcag
     1561 aaactcatcg gcaataccgt gtacgccaaa cgcttccgga tccaccagcc gatccggctt
     1621 caggtaaaca tgaaaattgt tgccggtcag acgacggttt atcacctcaa ccgcaccgat
     1681 ctcaataatc ttgtgacctt catagtgcgc gcctatctgg ttcataccgg tggtttcggt
     1741 atcgaggaca atctgtcgtg taattgcagt gctcatatcg gtcatttatg tcagacttgc
     1801 gttttgttat cgatttcaat tacaggaagt ctaccagaga tgcttaaaca ggtagaaatt
     1861 ttcaccgatg gctcttgcct ggggaatcca gggcctggtg gttatggcgc tatcttacgc
     1921 tatcgcggtc atgaaaaaac gtttagtgaa ggttacacgc tgaccaccaa taaccgtatg
     1981 gaactgatgg cggcgatcgt cgcgcttgaa gcgttaaaag aacattgcga agtgacattg
     2041 agcaccgaca gccaatatgt gcggcaagga attacccaat ggattcataa ctggaagaaa
     2101 cgcggctgga aaacagcgga aaagaaacct gtaaaaaatg tcgatctctg gaaacgtctc
     2161 gatgctgcgt taggccagca tcagatcaaa tgggtatggg tcaaaggcca tgcaggccat
     2221 cccgaaaacg agcgttgtga tgaactggcg cgcgccgcgg caatgaatcc cacgcaggaa
     2281 gatagtggct accaggcaga agcttagcca tccggtttgc gatattgccg ggtggcgcca
     2341 acggtctggc ggataggggt tttactttta ttatgtcgca gcggattaag cgtaagcgga
     2401 atggtccgct tacgggccac aataagctgt aaacagccca gcgccgggat atgcgtattt
     2461 aaaagccgcc ctccctgctt tttccagggt aagacatgaa aacggctata atgtagcact
     2521 tcgaaattga gtaaagacag ccagtccagt tgccgcataa gggtaaacat ccgactatta
     2581 tagggcggtg ttttacgtaa aacgagtacc agtttacgta accccatcaa actcagcggg
     2641 ttaaatccac tgatgaccag ccaaccgtca tcaatcaata cgcggtcggc ttcccgcaat
     2701 aaacggtgcg ggtcggtaca ccacggcaaa gtatgcgcca gcagacaaac atcgacggat
     2761 ttatccgcaa aaggaagatg tagcggatcg gccagaacct gcatcggcga cccctgcgat
     2821 gaaacattca cttgatggga gaccgcgcac gcttcggaat tgatttctgc gcttaaatta
     2881 ccgattttaa gcaaatggaa accatacatt tttgcaaacc acggatttag ctgctgttcc
     2941 agcgcctcac ggtagtaatt gccccagggc aactcacccc aacatccggg cgcaacgaca
     3001 gtttgagaga gccttgccgg tttcatcgca accttccgct aattatttga gaggtaatat
     3061 atgaatctta acagtattcc cgcgtttcag gacaattaca tctgggtgct gaccaatgat
     3121 gaaggccgct gtgtgattgt tgatcccggc gaagcggccc ccgtcttaaa ggccattgct
     3181 gcacataagt ggatgccgga ggcgattttt ctgacgcatc accattacga ccatgttggc
     3241 ggagtcaaag agctgttgca acacttcccg caaatgacgg tttatggacc ggcggaaacg
     3301 caagacaagg gagcaaccca tcttgttggc gatggcgata ctattcgcgt tttaggcgag
     3361 aaatttactc tttttgccac gccgggccac acgttaggac acgtctgtta ctttagccat
     3421 ccttacttgt tctgcggcga cacgctgttc tctggcggct gtggtagatt gtttgaaggc
     3481 acgccatcac agatgtatca gtcacttatg aaaattaact ctctgcctga cgacacactc
     3541 atttgcagcg ctcacgaata cactttagct aacattaagt tcgcattgag catacttccg
     3601 cacgattcgt tcataaatga atattatcgt aaagttaaag agttacgtgt aaaaaaacaa
     3661 atgacactac ccgttattct taaaaatgag cgtaagatta atcttttttt aagaactgaa
     3721 gatattgatt taattaatga aataaacaaa gaaacaatat tgcaacaacc agaagcgcgt
     3781 tttgcatggt taaggtcaaa gaaagacacg ttctgataat tcttacttgt cattcgctaa
     3841 cttcgccgtt atgatcggtc gtcttttaag caactattga cacacacatg aaggcaaaag
     3901 cgatattact cgcctctgtc ctgcttgtgg ggtgccagac atctcagaac actggcaacg
     3961 tccaacagca cgcacagagc ctttctgcag ctggtcaagg ggaagcagga aagtttacga
     4021 gtcaggcacg atggatggac gacggaacgt ctatcgcgcc agatcaggac ttgtgggctt
     4081 tcattggcga cgagctaaag atgggaattc cggaaaacag ccggattcgc gaacagaaac
     4141 agaagtattt acgcaataag agctatctcc acgatgtaac tttacgggca gagccgtata
     4201 tgtactggat agcggggcag gttaagaaac gtaacatgcc tatggagctg gtactactac
     4261 ccatagtgga gagcgctttt gatcctcacg caacgtctgg cgccaatgcc gcaggcatct
     4321 ggcagatcat accgagcaca gggcgcaatt atggtttaaa gcagacccgt aattatgacg
     4381 cgcgtcgcga tgttgtagcc tctacgaccg ccgcgttaga catgatgcag cgtctgaaca
     4441 aaatgtttga cggcgactgg ctgttaactg ttgcagcgta taacagcggc gaaggccgtg
     4501 ttatgcgggc aattaaagca aacaaagcgc gtggaaaacc gacggatttc tggtcgcttt
     4561 ctttgcccag agaaacgaaa ctctacgtac ctaagatgct ggcattgagt gaaattctca
     4621 aaaacagcaa acgctacggc gtacgtctgc caacaacaga tgaaagccga gcgctggcac
     4681 gagttcgttt aaacagtcca gttgaaatgg cccaggttgc ggatatggcg ggcatgtcta
     4741 tcagcaagct gaagacgttt aatgccggtg taaaagggtc taccttaggc gtaagcggtc
     4801 cgcaatatgt tatggtgccc aaaaagcatg ccgagcagtt gcgtgagtcg ctggcttccg
     4861 gtgagattga cgccgttcag tcccaactga tcgccgacaa tacgccgttg aatagccgta
     4921 gctataaggt gcgctctggc gatacgcttt ccggtattgc ttcgcggctt ggcgtaagca
     4981 cgaaggactt gcagcagtgg aacaacctgc gtggttcccg cctgaaaatc gggcaaagcc
     5041 tgaccgtggg cgctggcagc agcgcgcaac gactggcaaa caatagcgat agcattacct
     5101 atcgtgtccg taaaggcgat tcgctttcca gtatcgccag acgtcacggg gtgaatatca
     5161 aagatgtgat gcgctggaac catgatacgg ataatctaca accgggcgat cagcttacgt
     5221 tgtttgtgaa ggacaatagc acgccagact cctgatattg tccgacgaaa aagccaaaag
     5281 gcgccgcttc ccccggcgcc ttttaaattg ttataccgct ttatgcgctt ccagcatgat
     5341 agtatcgctg ctaaacgagc cgtcatcctg caactcaaaa taacgcttca cctctaccgg
     5401 ggcgctcgcc tgatataatc gaatcgcctc aaccaacggc gctggcgtac gcatccgcgt
     5461 tacccatgag cgaaactcca gcgataaacg atcggttatc acggtattcg ttaccagcat
     5521 cgcgttattg accatcgcca gccattcacc actggaatag ttacggacat gcgacgtgtc
     5581 gcgtaacgcc tccaccgttt gcagccagat atcgcgtaca ggatgtccag gcgacatgac
     5641 atccatgata atcagcacgc cgccgggttt taatacacga taaacctcac gcaatgcctg
     5701 accaacgtcg tgccagtgat gcgcggaata gcggctaatc accacctcaa acgatgcatc
     5761 ttcaaagggc agtttttcgg catagccttg ccggagagta atattactta aatgtctttc
     5821 ttccgccgct ccagcgacaa cctcaagcat gctggcggat aaatcgtatg ccacgaccga
     5881 attgacatgt tgcgcagcga caaaactcgc gtgtccagcc ccacatccca tatccagtac
     5941 gctcgcgtgg gaaaaatcag acaacctttg cgccagccgc gctaagtcac gacccgctgc
     6001 gtgaacggcg ctatgtaaat aggcgttcgc ctgtgaacca aactgctttt caacattgtc
     6061 atggtgggaa tgcgttgtca tggtagtgcc cttctgttat gagaaaaata gagggcagca
     6121 cccgcagagg cctgccccac ggcagacctg actcaccttt attgctcagg tttgccggga
     6181 ctgaattcaa cgagtagcgg attgtgatcg gaagcgcgcg tcaccagtac ggaggcttca
     6241 ttcacgttta aaccacgata aaaaacaaaa tccagcggtc gtccaaacgc acgacggcgt
     6301 tgatcgtcag tgaaacgcac ctggcgcagc gacatctcac gtgcaaagcg gtacaacgca
     6361 ttcatacgtg ggcggctcca ggcattaaaa tcacccgcca taatgacagg gccgctatgg
     6421 tgcgcaatct ggtcgccgat cggaagtaac tgcttactgt atacgtccac gcccagacta
     6481 aaatttaccg catgaacatt tactaccatt aataaacggg tatccggcaa gggatatacc
     6541 gtcaccaggg ctgatttcgc caaacgtaaa attggttctc tttcccgtaa agggcagcag
     6601 taaacaggat gggcggcaga aagcgtcata acgccagacg ggtgctgagg taatacaaaa
     6661 gcgggaacct gatcggcggc aagatagtta gcggtggcaa actgtaccag ttcaggcgtc
     6721 gtctgggcct cctgcaacag gaccagatgc gcatctttgc cgtagttctt cagcaccgat
     6781 aaccattcgg ctcgctgctg cttgaatata ttccacacga ggatacggat ccgctcttca
     6841 ctgcttagcg gttccccggc gggcaatgcc tggccaatgc tcgcaaacga ccctagcggc
     6901 aaaatccgct cggcgggctg tccggcaaca tagcgcatcg cataggtgtt ttttcgcact
     6961 tttgactttc aaacctctgt aacgtcaacc agtcctcaac cggactggtt cttctgttat
     7021 agggatttta gcactcactt tcaacgaaca attgcagttt gttttgtaag taggcgctta
     7081 catcaataat ttactccaga gcaatgcgca caggtttatc aagacgtccg ctgacgccca
     7141 tcagcagaaa agccaccaga acaatgaggg cgccaatcca cggcgtctgc gccaaaccgt
     7201 aatgcgccac cgtttgtccg ccaatcacgg aacccagcgc aataccaatg ttaaacgccg
     7261 caatgttcag acctgacgcc acatcaacgg cattaggcgt gaattgttcc gctttctgta
     7321 ccacgtagac ctgcaacccc ggtacgttac cgaaggcaaa gatccccatc accagaatgg
     7381 tagccagcgc ggcatactgc gtggaggccg tcacctggaa gaccatcagc agaacaaaca
     7441 gcgcggcgaa aatgaatttc agagccggca cggcaccatg cttatccgcc agtttaccgc
     7501 cccagatatt gccgatagcc actgatacgc cataacccag taggatccag cttactgctg
     7561 ccggagagaa tcccgccaga tcctgcatca tcggcgccag gaaggtgaat gccgtgaata
     7621 ccccgccgta gcccagcgcc gtaacggcgt aaatcagcag cagacgagga tgagtcagta
     7681 ctttcacctg gtcacgaatg ctggcggccg cccgaccagg aatattggca gggatcagca
     7741 gttgactgct catcagcgca atcacgccta acagtgatac cgcaaggaag gtctcacgcc
     7801 agccaaaatg ctgaccgata aatgtcccca gcggaacacc tgttaccagc gctactgtta
     7861 aaccaccaaa cataatagcg atagcagaag ccgctttctc tttcggcacc agacttgtcg
     7921 cgatggtaga gccaatcgag aagaacacgc cgtgcgccag gcccgtcagc agacgggcgg
     7981 cgattaatgt catatagccc ggagcctgcc acgccagcaa attccccgcc gtaaacaaga
     8041 ccatcagcgc gaccagtaac tgtttacgcg gcaggcgtcc ggtcagagcg gttagcaccg
     8101 gcgcgccaat agccacaccc agtgcataga ttaaaaccag cattccggca gaaggtaacg
     8161 agacagccag ttgttgtgca atggtcggca ccaggccgac aatcacgaac tcagtcgtgc
     8221 caatagcgaa ggcacttatt gtcagtgcaa ataaagcgag aggcatacat aactccataa
     8281 cagcagtaat cagatgacac gcagtatgcc aggatgtttt aatgacaaaa atagccaaaa
     8341 tataaattta attttgctgc aggagcagaa atgaaagcca cctccgaaga acttgcaatt
     8401 tttgtcgctg tcgtggaaag cggcagcttc agccgggcgg cagagcagct cggacaggcc
     8461 aattccgctg tcagtcgggc agttaaaaag ctggagatga agctcggcgt cagtctgctt
     8521 aatcgaacga cccgacagtt gagcctgact gaagaaggag agcgatactt caggcgtgtg
     8581 cagcagatac tgcaagaaat ggctgccgca gaaacggaaa tcatggagtc gcgtaatacc
     8641 ccacgcggct tactgcgtat cgatgcggca acgccggtaa tgctgcattt cctgatgccg
     8701 ctgattaaac cttttcgtga acggtatccg gaaataacct tgtctcttgt ctcctcagaa
     8761 acgttcatca atcttattga acgaaaagtg gatgttgcga tacgcgcagg cacgttgaca
     8821 gattcaagtc tgcgcgcacg tccgttattt accagctatc gtaaggttat cgcctcaccg
     8881 gattatattg cccgttttgg caagcctgag agcgttgaag agttaaaaca gcatctgtgc
     8941 ctggggtttt ctgaacctat ctcgctcaat acctggccga tagcctgtag tgacggacag
     9001 ctccatgaga tcgaatgtgg gatttcgtcc aacagcgggg aaacgttaaa acaactttgc
     9061 ctgaacggta acggcattgc atgtctttca gattatatga ttgataaaga gatcgcgcgg
     9121 ggagaactgg tggaactgct ggccgataaa cgtctgccgg tagaaatgcc tttcagcgcc
     9181 gtttactaca gcgatcgcgc cgtcagcaca cgtattcggg catttatcga ctttttgagc
     9241 gaatatataa gaacagcccc cgcaggagct gtgaaagagg ggtaaaggta caaaggatcg
     9301 ggtaattaat cccaggcagg agccagtcct tccgggctaa ccagacgatc gttgcagtcc
     9361 agcgccgcga tcgcattttt atcttcggca tccagatgca gatcctgcgc cagcaggttg
     9421 cttgccaggt tttcacgcct ggtggatgaa gggatcaccg agtaaccttc gcccattgcc
     9481 catgccagaa taacctgcac cggggtcgca ttatgtttaa ccgcaatgcg cgcaatcact
     9541 tcatctttca gcgctttacc gtatgccagc gtcatgtaag aggtgatatg gataccgtgc
     9601 gctttcgccc agtcaaccac cttacgattc tgcagatacg gagatagctc aatctggttg
     9661 gtggcgatat ggtctgcgcc caccgcggca atagcctttt ccatcaacgg aatagtgaag
     9721 tttgagatgc caatttcgcg agtcagccct tgttttttag cttccagcaa tgcctgcata
     9781 aattcttcga cagacacggc atcacccgga gatggccagt ggatcagcgt cagatcgaca
     9841 taatcggtac gcagtttttt caggctctct ttcaggcttg ggattagctt gtctttgcta
     9901 aggttttcaa tccagatctt ggtggtgatg tacagctcat tacgcggtac gccgctctca
     9961 gcaatcgcct gtccaacagc cgcttcatta tcatagattt gcgcagtgtc gacagcacgg
    10021 tagcccagtt caagcgccgt tttcacagaa gcgataacca cgtcgtcttt caggcgaaaa
    10081 gtacctaaac cgaatgcagg gatagtcata gaattcctct ttttaatcac tatgttcgtt
    10141 aactgagggg attatgacct tcagcgcttt gtagaaaaag agcgagaaat gcagaggatt
    10201 tttgcgaatt gagcaataat taaatcgcag gcaaagaaaa agccctgagc taatgctcag
    10261 ggctcttaat a
//
LOCUS       DAGWFR010000144        10211 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.146, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000144 DAGWFR010000000
VERSION     DAGWFR010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 10211)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10211)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10211
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.146"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..784)
                     /locus_tag="MOX77_003570"
     CDS             complement(<1..784)
                     /locus_tag="MOX77_003570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-keto-3-deoxygluconate permease 1"
                     /protein_id="HCA3358995.1"
                     /translation="MNIKKAIERVPGGMMVVPLVIGAVINTFAPQALEIGGFTTALFK
                     NGAAPLIGAFLLCMGAGISVKAAPQALLQGGTITLTKLLVAIGIGLGVEHLFGAEGIF
                     GLSGVAIIAAMSNSNGGLYAALVGEFGNERDVGAISILSLNDGPFFTMIALGAAGMAN
                     IPIMALVAVLVPLVVGMILGNLDPHMRDFLTKGGPLLIPFFAFALGAGINLEMLLQGG
                     LAGILLGVLTTFVGGFFNIRADRLVGGTGIAGAAASSTAGNAV"
     gene            complement(1019..1381)
                     /locus_tag="MOX77_003571"
     CDS             complement(1019..1381)
                     /locus_tag="MOX77_003571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YacL family protein"
                     /protein_id="HCA3358996.1"
                     /translation="MDYEFLRDVTGRVLVRMSMGHEVVGHWFNEEVKDNLSLLDEVEQ
                     AARTVKGSERSWQRAGHEYTIWMDGEEVMIRANQLDFSGDEMEEGMSYYDEESLSLCG
                     MEDFLRVVAAYREFVSKA"
     gene            complement(1569..4166)
                     /gene="acnB"
                     /locus_tag="MOX77_003572"
     CDS             complement(1569..4166)
                     /gene="acnB"
                     /locus_tag="MOX77_003572"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aconitate hydratase
                     2/2-methylisocitrate dehydratase"
                     /protein_id="HCA3358997.1"
                     /translation="MLEEYRKHVAERAAQGIVPKPLDATQMAALVELLKTPPVGEEEF
                     LLDLLINRVPPGVDEAAYVKAGFLAAVAKGDTTSPLVSPEKAIELLGTMQGGYNIHPL
                     IDALDDAKLAPIAAKALSHTLLMFDNFYDVEEKAKAGNEYAKQVMQSWADAEWFLSRP
                     PLAEKITVTVFKVTGETNTDDLSPAPDAWSRPDIPLHAQAMLKNAREGIEPDQPGVVG
                     PIKQIEALQKKGYPLAYVGDVVGTGSSRKSATNSVLWFMGDDIPNVPNKRGGGLCLGG
                     KIAPIFFNTMEDAGALPIEVDVSNLNMGDVIDVYPYKGEVRNHETDELLATFELKTDV
                     LIDEVRAGGRIPLIIGRGLTTKAREALGLPHSDVFRQAKDVAESSRGFSLAQKMVGRA
                     CGVKGIRPGAYCEPKMTSVGSQDTTGPMTRDELKDLACLGFSADLVMQSFCHTAAYPK
                     PVDVTTHHTLPDFIMNRGGVSLRPGDGVIHSWLNRMLLPDTVGTGGDSHTRFPIGISF
                     PAGSGLVAFAAATGVMPLDMPESVLVRFKGKMQPGITLRDLVHAIPLYAIKQGLLTVE
                     KKGKKNIFSGRILEIEGLPDLKVEQAFELTDASAERSAAGCTIKLNKEPIVEYLTSNI
                     VLLKWMIAEGYGDRRTLERRIQGMEKWLADPQLLEADADAEYAAVIDIDLADIKEPIL
                     CAPNDPDDARLLSDVQGEKIDEVFIGSCMTNIGHFRAAGKLLDSHKGQLPTRLWVAPP
                     TRMDAAQLTEEGYYSVFGKSGARIEIPGCSLCMGNQARVADGATVVSTSTRNFPNRLG
                     TGANVFLASAELAAVAALIGKLPTPEEYQTFVAQVDKTAVDTYRYLNFDQLSQYTEKA
                     DGVIFQTAV"
     gene            4555..6177
                     /locus_tag="MOX77_003573"
     CDS             4555..6177
                     /locus_tag="MOX77_003573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459162.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3300 domain-containing protein"
                     /protein_id="HCA3358998.1"
                     /translation="MTLPFKPHLIALVCSAGLFAASGVLYVKSRAPEAPAQAAAPTSE
                     PTQTAVPAPVAKTTFTTAQIDQWVAPVALYPDALLSQVLMASTYPANVVQAVQWSRDN
                     PTLQGDAAIQAVASQPWDPSVKSLVAFPQLMALMGENPQWVQNLGDAFLAQPQDVMDA
                     VQRLRLLAQQTGSLKSTPQQTVTSVPKSSASTAVTTTTTTSASTPATPSTVIKIEPAN
                     PQVVYVPNYNPTTVYGAWPNTAYPPVYLPPPPGQQFADSFVKGFGYSLGVATTYALFS
                     SIDWDDDDHHHHDDDHHDDDYHHGGNGYQHNGDNININVNNFNRISGQNLPGQTMGWQ
                     HNPAWRNGVPYPNNTVAQRFHPTNVSGGLSATQQAPVSRDSQRQAAMAQFQQRSHTSP
                     ANVSGETSRDRQRKAASQQLNQIAQRNNYRGYDGTQNSSRREAAQQTLNKSTTQQHRS
                     ELKAKAQQHPVSQQQRDTARQRIESSTPQQRQAFRQNMHANVFSGNDSRSPSWQSQQL
                     RGLESRRGSHLNTEQRAAAREHFSEHHEFHRR"
     gene            6190..6981
                     /locus_tag="MOX77_003574"
     CDS             6190..6981
                     /locus_tag="MOX77_003574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2950 family protein"
                     /protein_id="HCA3358999.1"
                     /translation="MKKVMLSALLLSLPLLGYAQERFPSPEAAASAFAAAVAGKNETQ
                     LTALLGDDWRQFLPPEGADPEAVARFNRDWREGHRIVQKDNTAHLNVGREDWQLPVPM
                     VKETGGWRFDMAAAGNEILTRTIGRNELSTLQAMHAYVDAQQDYYLQNHRWAHRIISS
                     EGQKDGLYWPTKAGDVPSPLGPNFSPAAPDEGYHGYHFRIISDNDGHGAALLAWPMHY
                     GETGVMSFMVNQDDRIYQADLGKETESKVQAITRFAPDAQWQVAE"
     gene            complement(7019..7303)
                     /locus_tag="MOX77_003575"
     CDS             complement(7019..7303)
                     /locus_tag="MOX77_003575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein"
                     /protein_id="HCA3359000.1"
                     /translation="MKLFLTTAALTATLISGMAFASDPVIPWATNSGGTESTHIAAMG
                     EDLNAQHQQITHTHEGVWAANSGSIQADEAALTSNKPPVQGHPELMPHQG"
     gene            complement(7592..9016)
                     /gene="lpdA"
                     /locus_tag="MOX77_003576"
     CDS             complement(7592..9016)
                     /gene="lpdA"
                     /locus_tag="MOX77_003576"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001738005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HCA3359001.1"
                     /translation="MSTEIKTQVVVLGAGPAGYSAAFRCADLGLETVIVERYNTLGGV
                     CLNVGCIPSKALLHVAKVIEEAKALAEHGIVFGEPKTDIDKIRTWKEKVITQLTGGLA
                     GMAKGRKVKVVNGLGKFTGANTLEVEGENGKTVINFDNAIIAAGSRPIQLPFIPHEDP
                     RVWDSTDALELKEVPKRMLVMGGGIIGLEMGTVYHALGSEIDVVEMFDQVIPAADKDI
                     VKVFTKRISKKFNLMLETKVTAVEAKEDGIYVSMEGKKAPAEAQRYDAVLVAIGRVPN
                     GKNLDAGKAGVEVDDRGFIRVDKQLRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEV
                     IAGKKHYFDPKVIPSIAYTEPEVAWVGLTEKEAKEKGISYETATFPWAASGRAIASDC
                     ADGMTKLIFDKESHRVIGGAIVGTNGGELLGEIGLAIEMGCDAEDIALTIHAHPTLHE
                     SVGLAAEIFEGSITDLPNPKAKKK"
     gene            complement(9218..>10211)
                     /gene="aceF"
                     /locus_tag="MOX77_003577"
     CDS             complement(9218..>10211)
                     /gene="aceF"
                     /locus_tag="MOX77_003577"
                     /EC_number="2.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459158.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="dihydrolipoyllysine-residue acetyltransferase"
                     /protein_id="HCA3359002.1"
                     /translation="AAKAEKPAAPAAKAEGKSEFAENDAYVHATPLIRRLAREFGVNL
                     AKVKGTGRKGRILREDVQAYVKDAIKRAEAAPAAAGGGIPGMLPWPKVDFSKFGEVEE
                     VELGRIQKISGANLSRNWVMIPHVTHFDKTDITDLEAFRKQQNAEAEKRKLDVKYTPV
                     VFIMKAVAAALEQMPRFNSSLSEDGQRLTLKKYINIGVAVDTPNGLVVPVFKDVNKKS
                     VTELSRELTTISKKARDGKLTAGEMQGGCFTISSIGGLGTTHFAPIVNAPEVAILGVS
                     KSAMEPVWNGKEFVPRLMMPISLSFDHRVIDGADGARFITIINNMLSDIRRLVM"
BASE COUNT         2359 a         2955 c         2649 g         2248 t
ORIGIN      
        1 caacggcatt acccgcagtg ctggaggccg ccgccccggc aatgccagtt ccgccaacca
       61 gacgatctgc gcgaatatta aagaaaccgc caacgaacgt tgtcagcacg ccgagcagaa
      121 ttccggcaag tccgccttgc agtaacattt ccaggttgat gcccgccccc agcgcaaaag
      181 caaagaaagg aatgagcagc gggccgcctt tggtcaaaaa atcgcgcata tgaggatcaa
      241 gattgccgag gatcatgccg acaaccagcg gaaccagcac cgccaccagc gccataatgg
      301 gaatgttcgc catccctgcc gcgcccagcg caatcatcgt aaagaaaggg ccatcattaa
      361 gagacaaaat agagatagcg ccgacgtcgc gctcattgcc gaattcgcct accaacgcag
      421 cataaagtcc gccattcgaa ttgctcatcg ccgcgataat cgccacgccg ctcaggccaa
      481 aaataccctc cgcgccgaaa agatgctcca cgcccaggcc aatgccgatg gcgacaagca
      541 acttagtgag cgtaatcgtc ccgccctgca ataacgcctg gggcgcggct ttcacactga
      601 taccggctcc catacacagc agaaaagcgc caatcagcgg cgccgcgccg tttttaaata
      661 aggcagtggt aaaaccgcca atctcaagcg cctgcggggc gaaggtgtta atgactgcgc
      721 caataacgag cggtacgacc atcatgccgc cgggtacgcg ctctattgct tttttgatgt
      781 tcatggtctt accgcctgtt gcttgttgtg attgaataaa atcataacga ttatattcaa
      841 tcaaattaag atcacaaacg cgtcagatca cagttttaaa atgattaata aaaatcaaaa
      901 aatcattctg caataaaaaa gccgggatac tcccggctgg aatgtgtggt gatttcgttt
      961 ccactaccgc ccccaactgt ccgtcgacag gcgttgcggg gcaataacga agagagggtc
     1021 aggctttact gacgaattcc cgatacgcgg cgacgacccg cagaaaatcc tccatgccgc
     1081 acagggataa actctcttca tcgtaataac tcatcccctc ttccatctca tcgccggaaa
     1141 aatccagctg attggcgcga atcatcactt cttcgccgtc catccagatc gtgtactcat
     1201 gccctgctcg ttgccaggaa cgttcgctgc ctttgaccgt acgcgcggct tgttctactt
     1261 catccagtag cgagaggttg tctttaacct cttcattaaa ccagtgaccg accacctcgt
     1321 ggcccatcga cattcgtacc aaaacccgtc cggtcacatc gcgcagaaat tcgtaatcca
     1381 taatgtgttc ctctgcaaag cccttacagt cattatcgca gcagcggaga agaaaaaaag
     1441 cgggaacagc aggcggaatg aaaataaaaa cccaccgcag ttgcgatggg ttttgtaggc
     1501 ccggtaagcg tagccgccac cgggcaataa gaggcgtagg catggtaagc ctgacgccgt
     1561 caggcaaatt ataccgcagt ctggaaaatc accccatccg ctttctcagt gtactgagag
     1621 agctggtcga agttcagata acggtaggta tccaccgccg tcttatccac ctgcgccaca
     1681 aaggtctggt actcttccgg cgtcggcagt ttgccaataa gcgctgcaac cgccgccagc
     1741 tccgcagaag ccaggaagac gttcgcacca gtacctaaac ggttcgggaa gttacgggta
     1801 gaagtggaaa ccaccgtcgc gccgtcagcc acacgcgcct ggttacccat acacagggaa
     1861 caacccggga tttcgatacg cgcaccgctc ttaccaaaca cgctgtagta accttcttcg
     1921 gtcagctgcg cagcgtccat acgggttggc ggcgctaccc acaggcgggt tggcaactgg
     1981 cctttgtggc tatccagcag cttaccagcc gcgcggaagt ggccgatgtt ggtcatgcag
     2041 gaaccgatga acacttcgtc gatcttctcg ccctgcacgt cagacagcag acgcgcgtcg
     2101 tccggatcgt tcggcgcaca gaggattggc tctttgatat ccgccagatc gatgtcgatc
     2161 accgctgcgt attccgcgtc agcatcggct tccagcagct gcgggtccgc cagccatttt
     2221 tccataccct ggatacgacg ttccagcgta cgacggtcgc cgtagccttc ggcgatcatc
     2281 cacttcagca ggacgatgtt ggaggtcagg tattcaacga tcggctcttt gttcagcttg
     2341 atggtacaac cggcagcgga acgctcggca gaagcatcgg tcagctcaaa cgcctgctcg
     2401 actttcagat ccggcagacc ttcgatttcc aggatgcggc cagagaagat gtttttcttg
     2461 cctttcttct caacggtcag caggccctgt ttgatggcgt acagcgggat ggcatggacc
     2521 agatcgcgca gggtgatgcc cggctgcatt ttgcctttga agcgcaccag caccgattcc
     2581 ggcatatcca gcggcatcac gccggtcgcg gcggcaaacg ccaccagacc agaacccgcc
     2641 gggaaagaga taccaatcgg gaaacgggta tgggagtcac cgccggtacc gacggtgtcc
     2701 ggcagcagca tacggttcag ccaggagtgg atcacgccgt cgcccggacg cagggagaca
     2761 ccgccgcggt tcataatgaa gtccggcagc gtgtggtgcg tggtgacgtc aacgggcttc
     2821 ggataggctg cggtgtgaca gaacgactgc atgaccagat cggcggagaa tcccagacag
     2881 gccaggtctt tcagctcatc acgggtcatc gggccagtag tatcctgaga accgacggag
     2941 gtcattttcg gttcgcagta cgcgcccgga cgaatgcctt tcacgccgca ggcgcgaccg
     3001 accattttct gcgccagaga gaagccacgg ctgctttctg ccacgtcttt tgcctgacgg
     3061 aaaacgtcag agtgcggcag acccagcgct tcacgcgctt tggtggtcag gccacgtccg
     3121 ataatcagcg gaatacggcc accggcgcgt acttcgtcga tcagcacgtc ggttttcagt
     3181 tcgaaggttg ccagcagttc atcggtttca tgattgcgca cttcgccttt gtacgggtag
     3241 acgtcaatta catcgcccat gttcaggtta gaaacgtcaa cttcaatcgg cagcgcgccc
     3301 gcatcttcca tggtgttaaa gaagataggc gcaattttgc cgccgaggca cagaccgccg
     3361 ccgcgcttgt tcggcacgtt cgggatgtca tcgcccatga accacagcac ggagttggtc
     3421 gcggatttac gggaagaacc ggtgcccacc acgtcaccca cgtaggccag cgggtagcct
     3481 tttttctgca atgcttcgat ttgtttgatc gggccgacaa cgcctggctg atccggctca
     3541 atgccttcac gggcgttttt cagcatcgcc tgcgcatgta acgggatatc cggtctcgac
     3601 cacgcatccg gcgccggaga gagatcgtcg gtattcgttt cgccggtcac tttgaaaacg
     3661 gtgacggtga ttttttccgc cagcggcgga cggctcagga accattcggc gtcggcccaa
     3721 gattgcatca cctgtttggc atattcattg cccgctttgg ctttctcttc tacgtcgtag
     3781 aagttatcga acatcagcag ggtgtgagac agcgctttgg ccgcaatcgg cgccagtttc
     3841 gcatcgtcca gcgcgtcaat cagcggatga atgttgtaac caccctgcat ggtgcccagc
     3901 agttcaatgg ctttttctgg ggagaccagc ggggaggtgg tgtcgccttt cgcgacagca
     3961 gcgagaaaac cggctttaac ataagcggct tcatcgacgc caggaggaac gcggttgatc
     4021 aacaggtcta acaggaattc ttcttcgccc acaggcgggg tcttcagcag ctcgacaagc
     4081 gcagccattt gggttgcgtc taaaggtttc ggcacaatcc cctgggcagc acgctcagct
     4141 acgtgcttac ggtattcttc tagcacgacg atatctcctc gctctcattg tcataatgcg
     4201 gcgcttttgt tgatgggcga ttctcttcac gctcctgtga gacagtagtt agtagggtaa
     4261 atgcccggta ccgcataagg cacaataaca ggattttctt taagtgttaa tctgtttaca
     4321 aaaaagcaac ataaaaaagt ggctgaatcg ttaaggatgg tctaatgctc tactgagacg
     4381 ggagctgcag ccataaatgc ttacctcatt tcgtgctttg atcgtcacgt aacgttaccg
     4441 atcccaacat tagctaaaaa ttaaactatc gtccctttat actcacgcca aactgcaccc
     4501 cgtcggcggc aggcataatg accatagcga ttctcgggaa tcgggagaga taaaatgacg
     4561 ttgcccttta aaccccatct cattgccctt gtgtgcagtg ccgggttatt tgccgcttcg
     4621 ggcgtactgt atgttaaaag ccgcgctccc gaagcgcccg cgcaggcggc agctcccacc
     4681 tctgagccaa cgcagaccgc tgtgcccgcg cctgtcgcga aaacgacctt taccactgcg
     4741 caaatcgatc aatgggtcgc gcctgtcgcg ctttatcccg atgccctgct ttcgcaggtg
     4801 ctcatggcct ccacctaccc ggcgaacgtg gttcaggccg tccagtggtc gcgggataac
     4861 cccacgctgc agggcgatgc cgctattcaa gcggtggcca gccaaccgtg ggaccccagc
     4921 gtcaaatcgc tggtcgcctt tcctcagttg atggcgctta tgggcgagaa tccgcaatgg
     4981 gtgcaaaacc tgggcgatgc gttcttagcc cagccacagg atgtgatgga tgcggtgcaa
     5041 aggctgcgtc tgctcgctca acaaaccggt tcgctaaaat ccacgccaca gcaaaccgtc
     5101 accagcgtgc cgaagtccag cgcttctacc gccgtcacga cgacaaccac cacatccgcc
     5161 agtacgccag caacaccgtc gaccgtcatc aaaattgaac ctgcgaatcc gcaggtggtg
     5221 tacgtgccaa actataaccc cacgacggtg tatggcgcct ggcccaatac cgcttatccg
     5281 ccggtgtatt taccgccccc tccggggcag cagtttgccg acagttttgt taaaggtttt
     5341 ggttatagtc tgggcgtcgc caccacctat gcgttgttca gcagcataga ctgggatgac
     5401 gacgatcatc accaccatga cgacgaccat catgatgatg attaccatca tggtggtaac
     5461 ggttatcaac ataatggcga taatatcaac atcaatgtca ataatttcaa ccggatatcc
     5521 gggcaaaacc tgccgggcca aacgatgggc tggcagcata atcccgcctg gcgcaatggc
     5581 gtcccctatc cgaataatac cgttgcgcaa cggttccatc ccaccaatgt tagcggcggg
     5641 ttaagcgcaa cgcagcaagc gccagtgtct cgcgacagtc agcgccaggc agccatggcg
     5701 caattccaac agcgcagcca tacatcaccc gctaacgtgt caggcgagac atcccgcgac
     5761 agacagcgca aagcggcatc gcagcagtta aatcaaattg cccagcgtaa taattaccgt
     5821 ggctatgacg gaacacaaaa cagcagtcgt cgcgaggcgg cgcagcagac actgaataaa
     5881 tccaccacgc agcagcatcg ttccgagctg aaggctaaag cccagcagca ccctgtttca
     5941 caacagcaga gagacaccgc ccgccagcgt attgaatcct ctacgccaca gcagcgtcag
     6001 gcatttcgcc agaatatgca cgccaatgtg tttagcggga acgacagtcg atcgccgtca
     6061 tggcaatcgc aacagctacg cggcctagaa agccgtcgcg gcagtcactt gaacaccgag
     6121 caacgcgccg ccgcgcggga acatttttct gaacatcatg aatttcatcg ccgttaaccg
     6181 gagcagataa tgaaaaaggt tatgttaagc gctctgttac tgtcgttacc cttgctgggc
     6241 tacgcgcagg aacggttccc ctccccggaa gcggccgcca gcgccttcgc cgcggcggta
     6301 gccggaaaaa acgaaacgca gcttaccgcg ctactgggcg atgactggcg gcaatttctg
     6361 ccgccggaag gtgccgatcc cgaggccgtg gcccgcttca atcgtgactg gcgcgaaggc
     6421 catcgcattg tacaaaaaga caatacggcg cacctgaatg tcggacgaga agactggcag
     6481 ctcccggtgc ccatggtgaa agagactggc ggctggcgct ttgatatggc ggcagccggg
     6541 aatgagatcc tcacccgtac tattgggcga aatgaacttt ctaccttaca ggccatgcat
     6601 gcttacgttg atgcgcagca ggactattac ttacaaaacc atcgctgggc gcacaggata
     6661 atcagtagcg aaggccaaaa agatggcctg tactggccaa ccaaagcagg cgacgtcccc
     6721 agtccgttag gcccaaactt tagtcccgca gcgccagacg agggttacca cggctaccat
     6781 ttccgtatta tcagcgataa cgacggtcac ggtgcggcgc ttctggcctg gccgatgcat
     6841 tacggcgaaa ccggggtgat gagttttatg gtcaaccagg acgatcgtat ttatcaggcg
     6901 gatttaggca aggagacgga gagtaaagtt caggctatca cgcgttttgc gccagacgcg
     6961 cagtggcagg tcgccgaata acccgtaagc gcctggcgtt atcgccaggc cgtgatcatt
     7021 agccctgatg cggcatcaat tccgggtggc cttgtaccgg cggcttgttg ctggtcagcg
     7081 cggcttcatc agcctgaatg ctgccggaat tggccgccca tacgccttca tgcgtgtggg
     7141 tgatctgctg atgctgcgca ttcaaatcct cgcccattgc cgcaatatgc gtgctttccg
     7201 taccgccgct gttagtcgcc caggggatga cgggatcgct ggcaaatgcc atgccggaaa
     7261 tcaaggtcgc agttagcgct gccgttgtca gaaaaagttt catatatcaa acctcataat
     7321 tagctcgcta ttattttata gcgttaccaa tttcaggatg atgacaaatt aaggagaggt
     7381 atttcttatg aaacaattag ttggtcgaaa atgacagaca aaggcactac cgacggcata
     7441 agctttgaaa aacgtactgc tgcggaaagg ataaattttg cggtttcgtt atccttcgcc
     7501 atcatttgac acatctgatt tgccatgcat aaaaaaagcg gctgtaaagc cgcttttctg
     7561 tatcgggtgg cgcattgcca cccgcagaag attatttctt cttcgctttc gggtttggca
     7621 ggtcggtaat gctaccttcg aagatttccg ccgccaggcc cacggactca tgcagagtcg
     7681 ggtgagcatg gatggtcagc gcgatatctt ccgcgtcaca gcccatttcg atcgccagac
     7741 cgatttcacc cagcagctcg ccgccgttgg taccgacaat cgccccgccg atcacgcggt
     7801 gagattcttt gtcgaaaatc agtttggtca taccgtctgc gcagtcagaa gcgatagcac
     7861 ggccagaagc tgcccacggg aaggtggcgg tttcatagct gatgcctttt tctttcgctt
     7921 ctttctcggt caggccaacc catgccactt ctggctcggt gtacgcgata gacgggataa
     7981 ctttcggatc gaagtagtgt ttcttcccgg cgataacttc agcggcaacg tggccttcgt
     8041 gaacgccttt gtgcgccagc atcggctgac cgacgatatc gccgatagcg aagatgtgcg
     8101 gcacgttggt gcgcagctgt ttgtcgacgc ggataaagcc acggtcgtca acttccacgc
     8161 cagctttgcc cgcgtcgagg tttttaccgt tcggcacacg accaatcgcc accagaaccg
     8221 catcataacg ctgcgcttca gccggggctt ttttgccttc catcgaaacg tagataccgt
     8281 cttctttcgc ttcaacggca gtcactttgg tttccagcat caggttgaat ttcttgctga
     8341 tgcgtttggt gaagacttta acgatgtctt tatcagccgc cgggataacc tggtcgaaca
     8401 tttcaaccac gtcaatctct gaacccagcg cgtggtatac ggtacccatt tccagaccga
     8461 tgataccgcc gcccatgacc agcatacgct tcggcacttc tttcagttcc agagcgtcgg
     8521 tagaatccca tacgcgcggg tcttcatgcg gaataaacgg taattggatc ggacgagaac
     8581 ccgccgcgat gatcgcgtta tcgaagttga tcacggtttt gccattttcg ccttccactt
     8641 ccagggtatt agccccggtg aatttaccca gaccattgac cactttcact ttacggcctt
     8701 tggccatacc agccagaccg ccggtcagct gcgtgatcac tttctctttc caggtacgaa
     8761 tcttgtcgat atcggttttc ggctcgccga agacgatacc gtgttcagcc agcgctttgg
     8821 cttcttcgat aacttttgct acgtgcagca gcgctttaga agggatacag ccgacgttca
     8881 gacaaacacc gccaagggtg ttgtagcgtt ctacaattac ggtttccaga cctaaatcag
     8941 cgcaacggaa agcggcagaa tagcctgccg ggcccgcccc aagtaccacg acctgagttt
     9001 tgatttcagt actcatcatg acctctttat ttgtatccgg cggtccgggg tacttgatcg
     9061 cccatcatcc accgggtcgt tctatccgcc cgtatcttac aaaattgtta acaattttga
     9121 aacaacaaac ggatcacgaa ttatcgcttt cgctaataac ctcacaaact ccatgagatt
     9181 atcaaaaaaa agccggccgt cgggccggct ttttcgctta catcaccaga cggcgaatgt
     9241 cagacaacat attgttgata atggtaatga aacgcgcacc atcagcacca tcgatcacac
     9301 ggtggtcgaa agaaagagag ataggcatca tcagacgcgg cacaaactct ttcccattcc
     9361 acaccggttc catcgccgac ttagaaacgc cgaggatagc cacttccggc gcgttgacaa
     9421 tcggcgcaaa gtgggtagtt cccaggccgc cgatgctgga gatagtgaag caaccaccct
     9481 gcatttcgcc agcggtcagc ttaccatcac gcgctttttt ggagatggtg gtcagttcac
     9541 gagacagctc ggtcacgctc ttcttattca cgtctttaaa gaccggaacc accaggccat
     9601 tcggggtatc aaccgccacg ccgatgttga tgtatttttt cagggtcaga cgctgaccgt
     9661 cttcggatag agagctgttg aagcgcggca tctgttccag agcagcggca accgctttca
     9721 tgatgaagac cactggcgtg tatttcacat ccagtttgcg cttctcagct tcggcgttct
     9781 gctgtttacg gaacgcttcc agatcggtga tatcggtttt gtcgaagtgc gtaacgtgcg
     9841 ggatcatcac ccagttacgg ctcaggttcg cgccagagat tttctggata cggcccagtt
     9901 ccacttcttc aacttcacca aacttgctga agtccacttt cggccacggc agcatacccg
     9961 ggataccgcc gcccgcagca gccggcgcag cttccgcgcg tttgatagcg tctttcacgt
    10021 aagcctgaac gtcttcgcgc agaatacggc ctttacgacc agtgcctttc actttcgcca
    10081 ggttgacgcc aaactcgcgc gccagacggc gaatcagtgg ggtagcgtga acgtaagcgt
    10141 cgttttcagc gaactcagat ttgccttcgg ctttggcagc cggggcagca ggcttctcag
    10201 ctttcgccgc c
//
LOCUS       DAGWFR010000145        10165 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.147, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000145 DAGWFR010000000
VERSION     DAGWFR010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 10165)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10165)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10165
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.147"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..1733
                     /gene="btsT"
                     /locus_tag="MOX77_003578"
     CDS             <1..1733
                     /gene="btsT"
                     /locus_tag="MOX77_003578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="pyruvate/proton symporter BtsT"
                     /protein_id="HCA3359003.1"
                     /translation="SSRRNGASLGEMIKEEMGTVPGTIALFGCFLIMIIILAVLALIV
                     VKALAESPWGVFTVCSTVPIALFMGIYMRFLRPGRVGEVSVIGIVLLVASIYFGGVIA
                     HDPYWGPALTFKDTTITFALIGYAFVSALLPVWLILAPRDYLATFLKIGVIVGLALGI
                     VILNPELKMPALTQYVDGTGPLWKGALFPFLFITIACGAVSGFHALISSGTTPKLLAC
                     ETDARFIGYGAMLMESFVAVMALVAASIIEPGLYFAMNTPPAGLGITMPNLHEMGGEN
                     APLIMAQLKDVTAHAAATVSSWGFVISPEQILQTAKDIGEPSVLNRAGGAPTLAVGIA
                     HVFHKVLPMADMGFWYHFGILFEALFILTALDAGTRSGRFMLQDLLGNFVPFLKKTDS
                     LVAGIIGTAGCVGLWGYLLYQGVVDPLGGVKSLWPLFGISNQMLAAVALVLSTVVLIK
                     MQRTKYIWVTVIPAVWLLICTTWALGLKLFSANPQMEGFFYMANLYKEKIANGTNLTA
                     QQIANMNHIVVNNYTNAGLSILFLVVVYSIIFYGFTTWMKVRNSDKRTDKETPYVPVP
                     EGGVKISSHH"
     gene            1828..2031
                     /locus_tag="MOX77_003579"
     CDS             1828..2031
                     /locus_tag="MOX77_003579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbdD/YjiX family protein"
                     /protein_id="HCA3359004.1"
                     /translation="MFDTLGQAKKYLGQAAKMLIGIPDYDNYVEHMKTNHPDKPYMTY
                     EEFFRERQQARYGGDGKGGMRCC"
     gene            2042..2998
                     /gene="yjiA"
                     /locus_tag="MOX77_003580"
     CDS             2042..2998
                     /gene="yjiA"
                     /locus_tag="MOX77_003580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase"
                     /protein_id="HCA3359005.1"
                     /translation="MTPIAVTLLTGFLGAGKTTLLRHILNEQHGFKIAVIENEFGEVS
                     VDDQLIGDRATQIKTLTNGCICCTRSNELEDALLDLLDSRDRGDIAFDRLVIECTGMA
                     DPGPIIQTFFYHDVLCERYLLDGVIALVDAVHANEQMNQFTIAQSQIGYADRILLTKT
                     DVAGDSEKLRERLARINARAPVYTVVHGDIDLSQLFNTSGFMLEENVLASQPRFHFIA
                     DKQNDVSSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLFQGV
                     QRLYSADWDRPWGDETPHSTLVFIGIQLPEDEIRAAFAGLRK"
     gene            complement(3073..3375)
                     /locus_tag="MOX77_003581"
     CDS             complement(3073..3375)
                     /locus_tag="MOX77_003581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnA antitoxin family protein"
                     /protein_id="HCA3359006.1"
                     /translation="MSMVKHKRGNASALSAQHEAELKALAKKSDDEIDYSDIPASEDG
                     QWSEAVRGKFFRPLKTQASVRIDADVMEWLKRPGKGYQTRLNAILREAMLREQNKK"
     gene            complement(3362..3649)
                     /locus_tag="MOX77_003582"
     CDS             complement(3362..3649)
                     /locus_tag="MOX77_003582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnT family toxin"
                     /protein_id="HCA3359007.1"
                     /translation="MPMEFEWDANKAKSNLRKHGVRFEDAVLVFDDPRHLSRQERYEN
                     GEYRWQTLGLVHGIVVILVAHSVRFESGFEVIRIISARKADRKERNRYEHG"
     gene            complement(3902..4816)
                     /locus_tag="MOX77_003583"
     CDS             complement(3902..4816)
                     /locus_tag="MOX77_003583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease"
                     /protein_id="HCA3359008.1"
                     /translation="MAVPTYDKFIEPVLRFLATRPEGALVREVREAAAEMLGLNEQQR
                     AEVITSGQLTYQNRTGWAHDRLKRAGLSQSLSRGKWCLTPAGMSWVASHPQPMTEQEV
                     SHFACDFNGVKLSKPADAVALDPQPESIEDDELARSSPDDRLEQALNEIRESVAEELL
                     ENLLQVSPARFEVIVLDVLHRLGYGGHRGDLQRVGGTGDGGIDGIISLDKLGLEKVYV
                     QAKRWKGTVGSAEVRGFYGALPEQKVKRGVFITTSGFTAHARDYANKVEGLVLVDGDR
                     LVHLMIDNDIGVSSRLLKLPKLDMDYFE"
     gene            5014..8523
                     /gene="hsdR"
                     /locus_tag="MOX77_003584"
     CDS             5014..8523
                     /gene="hsdR"
                     /locus_tag="MOX77_003584"
                     /EC_number="3.1.21.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction-modification system
                     endonuclease"
                     /protein_id="HCA3359009.1"
                     /translation="MNKSNFDFLKGVNDFIYAIACAAENNYPDDPNTTLIKMRMFGEA
                     TAKHLGQLLDIPVCENQHDLLRELGKIAFIDDSILSVFHKLRRIGNLAVHEFHNDLDD
                     AQMCLRLGFRLSVWYYRLVTKDYDFPVPMFVLPEHGENLYHQEVLTLKQQLERQAQEK
                     VQSQAELEAQQQRLVALNGYIAILEGKQQETEAQTKARLAALEAQLAAKDAELAKQTE
                     QERKAYHKEITDQAIKRTLNLSEEESRFLIDAQLRKAGWQADSKTLRFAKGARPEPGV
                     NKAIAEWPTGTDETGKTGFADYVLFVGLKPIAVVEAKRKNTDVFSKLNESYRYSKYFD
                     NGFLRDTLLEHYAPDEVHDAVPEYEISWQDTSGKQRFKIPFCYSTNGREYRAAMKTKS
                     GIWYRDVRHTTNMSKALPEWHRPEELLDMLGSDPQKQNQWFAENPGMSELGLRYYQED
                     AVRAVEKAIVNGQQEILLAMATGTGKTRTAIALMFRLIQSQRFKRVLFLVDRRSLGEQ
                     ALGSFEDTRINGDTFNSIFDIKGLTDKFPEDSTKIHVATVQSLVKRTLQSDEPMPVGR
                     YDCIVVDEAHRGYILDKEQTEGELQFRSQLDYVSAYRRILDHFDAVKIALTATPALHT
                     VEIFGEPVYRYTYRTAVIDGYLIDQDPPIQIVTRNAQDGVYLSEGEQVERLNPQGELI
                     NDTLADDQDFEVADFNRGLVIPAFNRAVCGELTKYLDPIGQQKTLVFCVTNAHADMVV
                     DELRTAFKKKYPQLEHDAIIKITGDADKDAKKVQSMIVRFNKERLPNIVVTVDLLTTG
                     VDIPSICNIVFLRKVKSRILYEQMKGRATRLCPSVGKTSFKIYDCVDIYSSLESVDTM
                     RPVVVRPQVELQTLVNEITDSETYKTIEADGRSFAEHSHEQLVAKLQRIIGLATYNRD
                     HSETVDKQVRRLDELCLDAAGVNFGGLASRLREKGPHWSAEIFNKLPGFIARLERLKT
                     DINALRDAPIFLDIDDEVVSVKSLYGDYDTPQDFLEAFDALVQHAPNAQPALQAVINR
                     PRDLTRKGLVELQEWFDRQHFEESSLRSAWKETRNEDIAARLIGHIRRAAVGDALKPF
                     DERVDHALARIKGENDWSPEQLSWLDRLAQALKEKVVLDDDVFKTGNFHRRGGKSMLQ
                     RTFDDNLDSVLDKFSDYIWDELA"
     gene            8681..10078
                     /locus_tag="MOX77_003585"
     CDS             8681..10078
                     /locus_tag="MOX77_003585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001063188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HCA3359010.1"
                     /translation="MNNNDLVAKLWKLCDNLRDGGVSYQNYANELASLLFLKMCKETG
                     QEADYLPEGYRWDDLKSRIDQEQLQFYRKMLVHLGEDKKKLVQAVFHNVCTTITEPKQ
                     ITELVSNMDSLDWYSGTRGKSRDDFGDMYEGLLQKNANETKSGAGQYFTPRPLIKTII
                     HLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELV
                     PGTRRLALMNCLLHDIEGNLDHGGAIRLGNTLGSDGENLPQADIVATNPPFGSAAGTN
                     ITRTFVHPTSNKQLCFMQHIIETLRPGGRAAVVVPDNVLFDRVGLEIRRDLMDKCHLH
                     TILRLPTGIFYAQGVKTNVLFFTKGTVANPTQDKDCTDDVWVYDLRTNMPRFGKRTPF
                     TEQYLQPFETVYGEDPHGLSPRAEGEWSFNAEETEVADSEENKNTDQHQATSRWRKFS
                     REWIRTAKSDSLDIS"
BASE COUNT         2425 a         2845 c         2693 g         2202 t
ORIGIN      
        1 tctcttcccg ccgtaacggc gcctctcttg gcgagatgat caaagaagag atggggaccg
       61 ttccaggcac catcgcgcta ttcggctgct tcttaatcat gatcatcatc ctcgcggtgc
      121 tggcattaat tgtggttaaa gcgctggccg aaagcccgtg gggcgtcttc actgtctgct
      181 caacggtgcc gattgcgctg tttatgggca tctacatgcg cttcctgcgt ccgggacgcg
      241 taggcgaagt ctccgttatt ggtatcgtgc tgctggtggc gtctatttac ttcggcggcg
      301 taattgccca cgacccgtac tggggcccgg cgctgacctt taaagacacc accattacct
      361 tcgcgctgat cggctacgcc tttgtttccg cgctgctgcc ggtatggctg atcctcgccc
      421 cgcgcgacta tctcgctacc ttcctgaaaa tcggcgtgat cgtcggtctg gcgctgggga
      481 ttgtgatcct caacccggaa ctgaaaatgc cagcattgac gcagtatgtc gacggtaccg
      541 gcccgctgtg gaaaggcgct ctgttcccgt tcctgttcat caccatcgcc tgtggcgccg
      601 tctctggctt ccacgcgctc atctcttccg gcaccacacc gaaactgctg gcctgtgaga
      661 ccgatgcgcg ttttatcggc tacggcgcga tgctgatgga gtcctttgtt gcggtgatgg
      721 cgctggtggc ggcctcgatc attgaaccgg gtctctactt cgcgatgaac accccgccgg
      781 caggtctggg cattaccatg ccaaacctgc acgagatggg cggcgagaac gcgccgctga
      841 ttatggcgca gttgaaagac gttactgcac atgcagcggc gaccgtcagc tcctggggct
      901 ttgtgatttc cccggaacaa atcctgcaaa ctgcgaaaga tatcggtgaa ccgtcagtat
      961 tgaaccgcgc aggcggcgcg ccaacgctgg cagtaggtat cgcgcacgtg ttccacaaag
     1021 tcctgccgat ggcggatatg ggcttctggt atcacttcgg tattctgttc gaagcactgt
     1081 ttatcctgac cgcactggat gcgggtaccc gttccggccg ctttatgttg caggatttgc
     1141 tgggtaactt cgtcccgttc ctgaaaaaaa ccgattctct ggtcgcgggt atcatcggta
     1201 ccgcaggctg cgtcggtttg tggggctatc tgctgtatca gggtgtggtc gacccgctgg
     1261 gcggcgtgaa gagcctgtgg ccgctcttcg gtatctctaa ccagatgctg gccgccgtgg
     1321 cgctggtgtt gagcaccgtg gtactgatca aaatgcagcg caccaagtac atctgggtga
     1381 cggtaatccc ggcggtatgg ctgctgatct gcaccacctg ggcactgggc ctgaaactgt
     1441 tcagcgccaa cccacagatg gaaggtttct tctacatggc aaacctgtat aaagagaaga
     1501 ttgccaacgg caccaacctg accgcgcagc agattgccaa tatgaaccat atcgtggtga
     1561 acaactacac taacgctggt ttgagtattc tgttcctggt ggtggtgtac agtattatct
     1621 tctacggttt caccacctgg atgaaggtac gcaacagcga taaacgtacc gataaagaaa
     1681 ccccgtatgt gcccgtgccg gaaggcggcg tgaagatctc ttcacaccac taaaactgat
     1741 gccgggtagc gcacagcgat cccggctagt gtaggccgga taaggcgcaa gccgccatcc
     1801 ggctttattc attaacagga cggcagaatg tttgatactt taggtcaggc aaaaaaatat
     1861 ctcggccagg cggcaaaaat gttgattggt attccggact acgacaacta tgtcgagcac
     1921 atgaaaacca accatcccga caagccgtac atgacctatg aagagttctt ccgcgaacgt
     1981 cagcaagcac gttacggcgg cgatggcaaa ggcggtatgc gctgttgtta atggagagac
     2041 tatgaccccg attgcagtta ccctacttac cggttttctt ggtgccggca aaaccaccct
     2101 actacgccat atcctcaacg aacaacatgg ttttaaaatc gccgttatcg aaaacgaatt
     2161 tggcgaagtc tccgttgacg atcaactgat tggcgatcgc gccacacaga tcaaaaccct
     2221 gactaacggc tgcatctgct gtacccgctc caacgagctg gaagatgcgc tattagacct
     2281 gctcgacagc cgcgaccgcg gcgatattgc tttcgaccgc ctggtgattg aatgcaccgg
     2341 catggccgac cccggcccga ttattcagac ctttttctac catgacgtat tatgcgaacg
     2401 ctacctgtta gacggcgtga ttgcgctggt cgacgcggtg cacgctaacg agcagatgaa
     2461 ccagttcacc atcgcccagt cgcagatagg ctacgccgac cgtatcctgc tgaccaaaac
     2521 cgacgtggca ggcgacagcg agaaactgcg cgagcggctg gcgcgtatca acgcccgcgc
     2581 cccggtttac accgtggtac acggcgatat tgacctgagt cagttgttta ataccagcgg
     2641 ctttatgctg gaagagaacg tgctggcaag ccaaccgcgt ttccacttta ttgccgataa
     2701 acagaacgat gtgtcgtcaa ttgtggtgga actggattac ccggtggata tcagcgaggt
     2761 ttcgcgggtg atggaaaacc tgctgctgga atcagcggat aaactgctgc gttacaaagg
     2821 gatgctgtgg atcgacggcg aacccaaccg cctgctgttc cagggcgtgc agcgtctcta
     2881 cagcgccgac tgggacagac cgtggggcga cgaaacgccg catagcacgc tagtgtttat
     2941 cgggatccag ttgccggaag acgagatcag agcggcgttt gcggggttaa ggaagtaacc
     3001 attaagcgct tatctggcct ggcgggaatt tgtaggccgg ataaggcgca gccgccatcc
     3061 ggcatcttct ggctatttct tattttgctc gcgcagcatc gcttcgcgca gaatggcatt
     3121 cagccgcgtc tggtagcctt ttcctggccg tttcagccat tccataacgt cggcgtcaat
     3181 acgcaccgag gcctgagttt ttaacgggcg aaaaaactta ccacgcactg cttcagacca
     3241 ctgtccatcc tccgaagcgg gaatgtcgct gtaatcaatc tcatcatctg attttttcgc
     3301 cagcgccttc agttcagcct catgctgagc actcagcgcg gatgcgttgc cgcgtttatg
     3361 tttaaccatg ctcataacga ttcctctctt ttctgtctgc cttacgagcg ctgatgatac
     3421 ggataacttc aaaaccactt tcgaaccgaa cgctatgagc aaccagaatg accacaatgc
     3481 catgaacaag gccgagggtc tgccaacgat attctccatt ctcataacgc tcctgacgtg
     3541 acaggtgtcg gggatcgtca aacaccagta ccgcatcctc aaagcggaca ccgtgcttcc
     3601 tcaggttgct tttagccttg ttcgcatccc attcaaactc catcggcatg tgttttccct
     3661 aattgtatat acaaaaatgt atatacaatt atcttacgat tatacctgga ttgttggaaa
     3721 tagcttcaca atttgcgtat tcgagataaa agaaaattga ccagaagagt aggccgcaga
     3781 aggcatgggt ttaggctgat acgcagccat agaaagtcac gtgatttctg ggcgagagga
     3841 aacacaggtg cccacaacgt ggtccatctc aattacccgt aatcaggttc cagcgttacc
     3901 actactcaaa gtaatccata tcgagctttg gcaacttgag taaacgtgag gatacgccaa
     3961 tatcattatc aatcatcaga tgcaccagcc tgtcgccatc caccagcacc agaccttcaa
     4021 ctttgttagc atagtctctg gcatgcgccg taaagcctga ggtggtaata aagacgccac
     4081 gtttcacttt ttgctcaggc aatgcaccat aaaagcccct gacttcagcg ctcccgacgg
     4141 tgcctttcca gcgtttggcc tgaacgtaga ctttttccag cccgagctta tcgagagaga
     4201 taataccgtc aatgccgcca tcgccggttc ccccgacgcg ctgcaaatca ccgcgatgac
     4261 cgccatatcc caggcggtgc aacacatcta acacaatcac ttcaaaacgc gccggcgaaa
     4321 cctgaagcag gttctccagc aattcttcgg caacagattc acgaatctca ttgagcgctt
     4381 gctccaggcg atcgtccggg ctgcttctgg caagctcatc atcctcaatc gattctggct
     4441 gtggatctaa cgccaccgca tctgccggct tactgagctt tacgccgtta aaatcacaag
     4501 caaaatgact cacttcctgc tcggtcatcg gctgcggatg cgaggcaacc cagctcattc
     4561 ccgctggtgt taaacaccat tttccccggg ataggctctg cgataacccg gcgcgtttga
     4621 gacgatcgtg cgcccaaccg gtgcggttct ggtacgtcag ttgtccactg gtaatcacct
     4681 ctgcacgctg ctgctcattt aacccaagca tttcggctgc agcttcacgc acttctctga
     4741 ccaaagcgcc ctcgggtcga gtggccagaa aacgcaacac tggttcaata aatttgtcat
     4801 atgttggaac agccataaat ccatccctgc tattgatata gattagatac cccgccggag
     4861 aacgatactc ttcaggaaaa cattaggaaa gaagcagtta ctctctgatt gttcgttgat
     4921 cacacacaat atgaagtcta ccatgggtct gttattttcc ctttacggca caaggtaata
     4981 acgtcttccc gctcaggaac cggatagata aaaatgaaca aatctaactt cgactttctc
     5041 aaaggcgtca acgacttcat ttacgccatc gcctgcgcgg cggaaaacaa ctatccggac
     5101 gatcctaata ccactctgat aaaaatgcgc atgtttggcg aagccaccgc gaaacatctc
     5161 ggccagttgc tggatatacc cgtctgcgaa aaccaacatg acctgctacg cgaactgggc
     5221 aagattgcgt ttattgatga cagcatcctt tctgttttcc ataagctgcg ccgtatcggt
     5281 aacctggccg tccacgaatt tcataacgat ctggacgatg cccagatgtg cctgcggctc
     5341 gggttccgcc tcagcgtctg gtactaccga ctggtaacca aagattacga tttcccggtg
     5401 ccgatgtttg ttctgccaga acacggcgag aatctttatc accaggaagt gctgacgctg
     5461 aaacaacagt tggaacgtca ggcgcaagag aaagtacaaa gtcaggccga actggaagct
     5521 cagcagcaaa gactggttgc gctcaacggc tacattgcca tccttgaggg caaacagcag
     5581 gaaaccgaag cccagaccaa agcacgtctg gccgcgctgg aggcacagct tgcggcaaaa
     5641 gatgccgaac tggcgaagca aaccgaacag gaacgtaagg cctatcacaa agagatcacc
     5701 gatcaggcta tcaagcgcac gctgaatctc agcgaagaag agagccgctt cctgatcgac
     5761 gcccagttgc gcaaagcggg ctggcaggcc gacagtaaaa cgctgcgctt tgccaaaggc
     5821 gctcgcccgg aacccggcgt caataaagcg attgccgaat ggccaacggg tacagatgaa
     5881 acgggaaaaa caggctttgc cgattacgta ttgttcgttg gcctgaagcc catcgccgtc
     5941 gttgaagcga aacgcaaaaa taccgatgtc ttcagcaagc tcaacgagtc ttaccgctac
     6001 agtaaatact tcgataacgg atttttacgc gacacgctgc tggagcacta cgctcccgac
     6061 gaagtgcatg acgccgtgcc agagtatgaa atcagctggc aggacaccag cggcaaacag
     6121 cgctttaaaa tccccttctg ctactccacc aacgggcgcg aataccgcgc agcgatgaag
     6181 accaaaagcg gtatctggta tcgcgatgtc cgacacacca ccaatatgtc aaaagcgctg
     6241 ccggaatggc atcgcccgga agagctgctg gatatgctgg gcagcgaccc gcagaaacaa
     6301 aaccagtggt ttgctgaaaa ccccggaatg agcgaactcg gcctgcgcta ttaccaggag
     6361 gatgccgtcc gcgcggtgga aaaggctatc gttaacggcc agcaagagat cctgctggcg
     6421 atggcgaccg gtaccggtaa aacccgtacc gccatcgccc tgatgttccg cctgatccag
     6481 tcgcagcgtt tcaaacgcgt tcttttcctg gtcgaccgtc gctcgcttgg cgaacaggcg
     6541 ctggggtcgt ttgaagacac gcgcattaac ggcgacacct ttaacagcat ttttgatatc
     6601 aaagggttga ccgacaaatt cccggaagac agcaccaaaa ttcacgtcgc cacggtgcag
     6661 tcactggtca agcgtacgct gcaatccgat gagccaatgc cggttggccg ctacgactgt
     6721 atcgtcgtcg atgaagcaca ccgcggctac attctcgata aagagcaaac cgagggcgag
     6781 ctgcagttcc gcagccagct ggattacgtt tccgcctacc gtcgcattct cgaccatttc
     6841 gatgcggtaa aaatcgccct gaccgccacg ccagcgctgc atacagtgga gattttcggc
     6901 gaaccggttt accgctacac ctaccgtacg gcggtgatcg acggttacct gatcgatcag
     6961 gatcccccta ttcagatcgt cacccgcaac gcgcaggatg gggtctatct ttccgagggt
     7021 gaacaggtgg agcgcctgaa cccacagggc gagctgatca acgacacgct ggccgacgat
     7081 caggattttg aggtcgccga ctttaaccgt ggcctggtga tcccggcgtt taaccgcgcg
     7141 gtatgcggcg agctcaccaa atacctggat cccatcgggc aacaaaaaac gctggtgttc
     7201 tgcgtcacca acgcccatgc cgacatggtg gttgacgaac tgcgtaccgc gtttaagaaa
     7261 aagtatccgc agcttgagca cgacgcgatc atcaagatca ccggtgatgc cgataaagac
     7321 gcgaagaaag tgcaaagcat gatcgtccgt ttcaacaaag agcggttgcc caatatcgtg
     7381 gtcaccgtcg atctgctgac caccggtgtg gatattccgt ctatctgtaa tattgtgttc
     7441 ctgcgcaaag tcaaaagccg cattctctac gagcagatga agggccgtgc cacgcgtttg
     7501 tgcccgtcgg tagggaaaac cagctttaag atttacgact gcgtggatat ctacagttcg
     7561 ctggaaagcg tcgacaccat gcgcccggtg gttgtgcgtc cgcaggtgga gctgcaaacg
     7621 ctggtcaacg aaattaccga ctcagaaacc tacaaaacca ttgaagcgga tggccgcagt
     7681 tttgccgaac acagccatga acagctggtc gctaagctgc agcggattat cggtcttgcc
     7741 acctataacc gtgaccacag cgaaacggtg gataagcaag tacgtcgtct ggacgaactg
     7801 tgcctggatg ccgcgggcgt taactttggt ggtctggctt cgcgcctgcg ggaaaaaggg
     7861 ccgcactgga gcgccgagat tttcaataag cttcctggtt ttatcgcccg cctcgaaagg
     7921 ctgaaaaccg atatcaacgc cctgcgcgat gcgccgatct tcctcgatat tgacgatgag
     7981 gtggtgagcg tcaaatcgct gtacggcgac tacgatacgc cgcaggactt tctcgaagcg
     8041 ttcgatgcgc tggtgcaaca cgcccctaac gcccagccgg cgctgcaggc ggtgatcaat
     8101 cgtccgcgtg acctcacccg taaagggctg gtggaattgc aggagtggtt tgaccgccag
     8161 cattttgaag agtcctctct gcgcagcgcg tggaaagaaa cacgcaatga agatattgcc
     8221 gcccgcctga tcggccatat ccgccgtgcg gcggtgggcg atgcgctcaa accgttcgac
     8281 gagcgtgtcg atcacgcgct ggcgcgtatc aaaggcgaga acgactggag ccctgagcag
     8341 ctaagctggc tcgaccgttt agcgcaggcg ctgaaagaga aagtggtgct cgacgacgac
     8401 gtcttcaaaa ccggcaattt ccaccgtcgc ggcggtaagt ccatgttaca gcgcaccttt
     8461 gacgacaacc tcgacagcgt gctggataag ttcagcgatt atatctggga cgagctggct
     8521 taagagggta tcatccccgt tttcgccgga tggcggcgat gccttatccg gcctacacgt
     8581 aaccctgtag gcctgataag cgaagcgcca tcaggcatct gaaatgctca atcacttttg
     8641 cgacccacaa tggtggtcgc catgtcaaat gggatcttca atgaacaata acgatctggt
     8701 cgccaagctg tggaaactgt gcgacaacct gcgcgacggc ggcgtctcct atcaaaacta
     8761 cgccaatgaa ctcgcctcgc tgctgttttt gaaaatgtgc aaagagaccg gtcaggaagc
     8821 ggactacctg ccggaaggct accgctggga tgacctgaaa tcgcgcattg accaggagca
     8881 gttgcagttt taccgtaaaa tgctggtgca tctgggggaa gataagaaaa aactggtgca
     8941 ggcggtattt cataatgtgt gtacaaccat cactgaaccc aaacagataa cagaattagt
     9001 cagcaacatg gattcgctgg actggtacag cggtacacgc ggcaagtccc gcgacgactt
     9061 cggcgatatg tacgaagggc tgctgcagaa gaacgctaac gaaaccaaat ccggcgcggg
     9121 ccagtacttc accccgcgtc cgctgatcaa aaccattatt catctgctga agccgcagcc
     9181 gcgtgaggtg gtgcaggacc cggctgccgg gaccgcaggt tttttgattg aagccgaccg
     9241 ttacgtgaag tcgcagacca acgatctgga tgaccttgat ggcgacaccc aggatttcca
     9301 gatccaccgc gcgtttatcg gcctcgagct ggtgcccggc acccgtcgtc tggcgctgat
     9361 gaactgtctg ctgcacgata ttgaaggcaa cctcgaccac ggcggcgcca tccgtctggg
     9421 caacacgctg ggcagcgacg gcgagaattt accgcaggcc gatattgtcg ccaccaaccc
     9481 gccgtttggc agcgccgcgg gcaccaacat tacccgcacc ttcgtgcacc cgaccagcaa
     9541 caaacagctt tgctttatgc agcatattat cgaaaccctg cgccccggcg gccgtgcggc
     9601 agtggtggtg ccggataacg tactatttga tcgagttgga ttggaaattc gtcgagattt
     9661 aatggacaaa tgccatctgc acaccatcct gcgtctgccg accggcatct tttacgccca
     9721 gggcgtcaaa accaacgtgc tgttctttac caaaggtacg gtagccaatc cgactcagga
     9781 taaggactgt accgatgacg tgtgggtgta cgacctgcgc accaatatgc cgagatttgg
     9841 taagcgtaca ccgtttactg agcaatacct gcagccgttt gaaaccgtct atggtgagga
     9901 tccgcacggc ttaagcccac gagccgaagg tgagtggagt tttaacgctg aagagacgga
     9961 agttgctgac agcgaagaga acaaaaacac cgatcagcac caggccacca gccgctggcg
    10021 caagttcagc cgcgagtgga tccgcacggc aaaatccgat tcgctggata tctcctagct
    10081 gaaggataag gacagcatcg acgccgacag cctgccggaa ccggacgtgt tagccgcaga
    10141 agcgatgggc gagctggtgc aggcg
//
LOCUS       DAGWFR010000146        10001 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.148, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000146 DAGWFR010000000
VERSION     DAGWFR010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 10001)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10001)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10001
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.148"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(213..440)
                     /locus_tag="MOX77_003586"
     CDS             complement(213..440)
                     /locus_tag="MOX77_003586"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3359011.1"
                     /translation="MVIPEVLIGGINVIVDHTNYTNLRRDAQVFFVSPEPVTVTDNLH
                     NSLHFRLFLCVFGLAMQTREAHNQDPRGIDW"
     gene            648..1676
                     /gene="galR"
                     /locus_tag="MOX77_003587"
     CDS             648..1676
                     /gene="galR"
                     /locus_tag="MOX77_003587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator GalR"
                     /protein_id="HCA3359012.1"
                     /translation="MATIKDVARLAGVSVATVSRVINDSPKASEASRLAVTSAMESLS
                     YHPNANARALAQQATETLGLVVGDVSDPFFGAMVKAVEQVAYHTGNFLLIGNGYHNEQ
                     KERQAIEQLIRHRCAALVVHAKMIPDADLASLMKQIPGMVLINRILPGLEHRCVALDD
                     RYGAWLATRHLIQQGHTRIGYICSNHTISDAEDRLRGYYDALAESHIPANDRLVTFGE
                     PDESGGEQAMTELLGRGRHFTAVACYNDSMAAGAMGVLNDNGVGVPGEVSLIGFDDVL
                     VSRYVRPRLTTIRYPIVTMATQAAELALALAGKCPTPEVTHVFSPTLVRRHSVSTPTD
                     TGHLSTTD"
     gene            1687..2709
                     /locus_tag="MOX77_003588"
     CDS             1687..2709
                     /locus_tag="MOX77_003588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000968342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HCA3359013.1"
                     /translation="MMATMLDVSRHAGVSKATVSRVLNGTGQVKESTRQKVFTAMQAL
                     DYRPNLLARSLANRTSNSIGLVVSTFDGFYFGSLLRRASRQAEFHNKQLIVTDGHDTP
                     EREQKAVQMLADRQCDAIILYTRYMDEPTILSLIDATEMPLVIINRNITQAHDRAIFF
                     EQETAAFQAVEYLITQGHRDIACITLPVHTPTGTSRVAGYRKALEKYGIPWQPAKVKY
                     GDYTLTRGYDACRELLEEGVTFSALFACNDDTALGAAKALRQAGLRIPQDVSLFGFDD
                     APGATWLEPGLSTVYLPIEDMIATAIDQAVRLANSEPVAPIPPFTGTLILRESVAAGP
                     FFQRPV"
     gene            complement(2719..3981)
                     /gene="lysA"
                     /locus_tag="MOX77_003589"
     CDS             complement(2719..3981)
                     /gene="lysA"
                     /locus_tag="MOX77_003589"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HCA3359014.1"
                     /translation="MSLPHYHAETDLNAENLLRLPAEFGCPVWVYDAHIIRRQIAALQ
                     QFDVVRFAQKACSNIHILRLMRAQGVKVDSVSLGEIERALAAGYDPQTCPDDIVFTAD
                     VIDAATLARVSELHIPVNAGSVDMLTQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGE
                     NSKHGIWHSDLPAALAVMQKYRLKLVGIHMHIGSGVDYGHLEQVCGAMVRQVLECGQD
                     VEAISAGGGLSIPYHEGEEPVDTRHYYGLWNAAREQIARHLGHAVKLEIEPGRYLVAQ
                     SGVLVTQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHRISALAADGRALENGPWVE
                     TVVAGPLCESGDVFTQQEGGMVETRALPAVIPGDYLVLHDTGAYGASMSSNYNSRPLL
                     PEVLFDNGQARLIRRRQTIEELLALEML"
     gene            4099..5034
                     /locus_tag="MOX77_003590"
     CDS             4099..5034
                     /locus_tag="MOX77_003590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCA3359015.1"
                     /translation="MAAVNLRHIEIFHAVMTAGNLTEAARLLHTSQPTVSRELARFEK
                     VLGLTLFERTRGRLHPTVQGLRLFEEVQRSWYGLDRIVSAAESLREFRQGELSIACLP
                     VFSQSFLPPLLPPFLARYPDVSLNIVPQESPLLEEWLSAQRHDLGLTETLHAPAGTTR
                     TELLTLNEVCVLPCDHPLAAKTVLTPDDFQGENFISLSRLDSYRQLLDTLFAEHQVKR
                     RMVVETHSAASVCAMVRAGAGVSIVNPLTALDYAASGVTVRRFSIDVPFTVSLIRPLH
                     RPASALVDAFSKHLQTHLSRLVEPLEVILGPMTKA"
     gene            complement(5006..5713)
                     /locus_tag="MOX77_003591"
     CDS             complement(5006..5713)
                     /locus_tag="MOX77_003591"
                     /EC_number="5.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/glutamate racemase"
                     /protein_id="HCA3359016.1"
                     /translation="MKTIGLLGGMSWESTIPYYRLINEGIKQQLGGLHSASLLLHSVD
                     FHDIEVCQRRGEWDKAGDILAQAAQGLQQAGAEGIVLCTNTMHKIAHIIESRCSLPFL
                     HIADATGRAIARQGLHRVALLGTRYTMEQDFYRGRLEQQFAIETIVPEADDRARINQV
                     IFDELCQGIFTDASRHYYLQVIEQLAAQGAQGVIFGCTEIGLLVPQTQSALPVFDTTA
                     IHAADAVSFMLSSSAPE"
     gene            complement(5826..7241)
                     /gene="araE"
                     /locus_tag="MOX77_003592"
     CDS             complement(5826..7241)
                     /gene="araE"
                     /locus_tag="MOX77_003592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose-proton symporter AraE"
                     /protein_id="HCA3359017.1"
                     /translation="MVSINDSALTPRSLRDTRRMNMFVSVSAAVAGLLFGLDIGVIAG
                     ALPFITDHFVLTSRLQEWVVSSMMLGAAIGALFNGWLSFRLGRKYSLMAGAILFVLGS
                     LGSAFASSVEVLIGARVILGVAVGIASYTAPLYLSEMASENVRGKMISMYQLMVTLGI
                     VLAFLSDTAFSYSGNWRAMLGVLALPAVLLIILVVFLPNSPRWLAQKGRHIEAEEVLR
                     MLRDTSEKARDELNEIRESLKLKQGGWALFKANRNVRRAVFLGMLLQAMQQFTGMNII
                     MYYAPRIFKMAGFTTTEQQMIATLVVGLTFMFATFIAVFTVDKAGRKPALKIGFSVMA
                     LGTLVLGYCLMQFDNGTASSGLSWLSVGMTMMCIAGYAMSAAPVVWILCSEIQPLKCR
                     DFGITCSTTTNWVSNMIIGATFLTLLDSIGAAGTFWLYTALNIAFIGITFWLIPETKN
                     VTLEHIERKLMAGEKLRNIGV"
     gene            complement(7595..8356)
                     /gene="kduD"
                     /locus_tag="MOX77_003593"
     CDS             complement(7595..8356)
                     /gene="kduD"
                     /locus_tag="MOX77_003593"
                     /EC_number="1.1.1.127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase
                     KduD"
                     /protein_id="HCA3359018.1"
                     /translation="MILNAFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVE
                     PTETIARVTALGRRFLSLTADLRQIDGIPALLERAVAEYGHIDILVNNAGLIRREDAI
                     DFTEKDWDDVMNLNIKSVFFMSQAAAKYFIAQGNGGKIINIASMLSFQGGIRVPSYTA
                     SKSGVMGITRLMANEWAKHNINVNAIAPGYMSTNNTQQLRADAQRSAEILDRIPAGRW
                     GLPGDLMGPVVFLASSAADYINGYTIAVDGGWLAR"
     gene            complement(8411..9247)
                     /gene="kduI"
                     /locus_tag="MOX77_003594"
     CDS             complement(8411..9247)
                     /gene="kduI"
                     /locus_tag="MOX77_003594"
                     /EC_number="5.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-dehydro-4-deoxy-D-glucuronate isomerase"
                     /protein_id="HCA3359019.1"
                     /translation="MDVRQSIHSEHAKTLDTQALRREFLIENIFVADEYTMVYSHIDR
                     IIVGGIMPVSHPVEVGGEVGKQLGVSRLLDRRELGVINIGGAGAIIVDGQRHDIGHRD
                     ALYIGKGAKELVFVSNEASRPAKFYYNCAPAHTAYPTKKVSPADVAPVTLGDNLTSNR
                     RTINKYFVPDVLETCQLSMGLTELAPGNLWNTMPCHTHERRMEVYLYFNMEEDSCVFH
                     MMGQPQETRHIVMRNEQAVISPSWSIHSGVGTKAYTFIWGMVGENQVFDDMDHVAVQD
                     LR"
     gene            complement(9677..>10001)
                     /locus_tag="MOX77_003595"
     CDS             complement(9677..>10001)
                     /locus_tag="MOX77_003595"
                     /EC_number="2.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
                     /protein_id="HCA3359020.1"
                     /translation="ALMGIAPVYATRRCLERAGWQLTEVDLIEANEAFAAQALSVGKM
                     LEWDERRVNVNGGAIALGHPIGASGCRILVSLVHEMVKRDARKGLATLCIGGGQGVAL
                     TIERD"
BASE COUNT         2416 a         2783 c         2522 g         2280 t
ORIGIN      
        1 cattgggacc cccttttgat ttcttgttga acttttgcag ttgccagacc gcaagatgtt
       61 ttaacaaatc aaaaggggtt ttaataactg gcttaaagct gaaagctttc cggaaccccc
      121 agcctagctg ggggttttcc atagacaaaa aaaacctgcg catccgcgca ggttggtgca
      181 agagacaggt acgaagagcg taccgaataa tctcaccaat caatacctct gggatcttga
      241 ttgtgggctt cgcgcgtctg catcgccagt ccgaaaacgc aaaggaataa acggaaatgc
      301 aacgagttgt gtaaattatc cgttactgtt acaggttcag gcgaaacaaa aaaaacctgc
      361 gcatctctac gcaggttggt gtaattcgtg tgatcaacaa tgacgttgat tccacctatc
      421 aatacctctg ggatcaccac tctatcaacc tgactcgctg gcctgccagc agacaatcgc
      481 aacagcgctt cgcaaactgt aacgaaagat ttgtattgtc actttacaga cgcatttctc
      541 ccgtgcaggt cacatttgtc cgacacggcg gggcaagagg cttgaacaga cgttcatttt
      601 ccgtaaaact ggcgtaatgt aagcgtttac ccactatagg tattatcatg gcgaccataa
      661 aagatgtagc ccgactggcc ggtgtttcag tcgccaccgt ttctcgcgtt attaacgatt
      721 cgccaaaagc cagcgaagcg tcccggctgg cggtgaccag cgcaatggag tccctgagct
      781 atcaccctaa cgccaacgcg cgcgcgctgg cacagcaggc aacggaaacc ctcggtctgg
      841 tggtcggcga cgtttccgat ccttttttcg gcgcgatggt gaaagccgtt gaacaggtgg
      901 cgtatcacac cggcaatttt ttactgattg gcaacgggta tcataacgaa caaaaagagc
      961 gtcaggctat tgaacagttg attcgtcatc gttgcgcagc gttagtggta cacgccaaaa
     1021 tgattccgga tgcggacctg gcctcattaa tgaagcaaat ccccggcatg gtgctgatta
     1081 accgcatttt accggggtta gaacatcgct gtgtcgcgct ggatgaccgt tacggggcat
     1141 ggctggcgac ccggcatctg atccagcaag gtcatacgcg tattgggtat atctgttcca
     1201 atcacactat ctctgatgcc gaagatcgcc tgaggggcta ttacgatgcg ctggcggaaa
     1261 gccatatccc ggctaacgat cggctggtga cgttcggcga accggatgaa agcggcggcg
     1321 agcaggcgat gactgagtta ttaggtcgcg gcagacattt taccgcggtg gcctgctata
     1381 acgactcgat ggcggccggc gcgatgggag tattaaatga taatggcgtg ggggtgccgg
     1441 gcgaagtatc gctcatcggt tttgatgatg tactggtctc acgctatgtg cgtccccgac
     1501 tgaccaccat tcggtatccg atcgtcacca tggcgacaca ggcggcggag ctggccttag
     1561 cgctggcagg gaaatgccct acgccagaag taactcatgt atttagtccg acactggtac
     1621 gccgacattc ggtgtccacg ccgacggata ccgggcacct gtcgacaacc gattaatcag
     1681 ggtagcatga tggcgacaat gctggatgtt tcccgccatg cgggcgtatc aaaggccacc
     1741 gtctcacgag tgctgaatgg gacggggcag gtaaaagaaa gcacgcgcca gaaagtgttt
     1801 acggcgatgc aggctctgga ctatcgcccc aacctgctgg cacgctcgct ggcaaatcgc
     1861 accagcaaca gcatcggtct ggtcgtctct acgtttgacg gcttctattt tggcagtttg
     1921 ttgcgccggg cgtcgcgcca ggcggagttt cataacaagc agttgatcgt caccgatggt
     1981 cacgatacgc cggaacgaga gcagaaagcc gtacaaatgt tggccgacag acagtgcgac
     2041 gctattattc tttacactcg ctatatggat gagccgacga ttttgtcgtt gattgacgcc
     2101 acggaaatgc cgctggtgat tattaatcgc aacatcactc aggcccacga tcgcgctatt
     2161 ttcttcgagc aggagacggc ggcattccag gcggtggaat acctgattac gcagggccat
     2221 cgcgatatcg cctgtattac gctgcctgtt catactccca ccggcacatc acgcgtagcg
     2281 ggttatcgaa aggcgctgga aaaatatggc attccctggc aaccggcaaa agtgaaatac
     2341 ggcgattaca cgctgacgcg cggctatgac gcctgccggg aattactgga ggaaggcgtc
     2401 acgtttagcg cgctattcgc ctgtaatgat gacacggcgc tgggcgcggc aaaagcgctg
     2461 cgccaggccg gattacgcat cccgcaggat gtgtcgctgt ttggttttga cgatgcgccg
     2521 ggcgcaacct ggcttgagcc ggggctttca acagtctatt tacccatcga ggatatgata
     2581 gccaccgcaa ttgatcaggc cgttcgtctg gcgaacagcg agccggtcgc cccgatcccg
     2641 ccctttaccg gcacgctgat tctgcgcgag tccgtcgccg cgggcccgtt ttttcaacgt
     2701 ccggtctaat gatgcgcttc agagcatctc cagcgctaac agctcttcaa tggtttgacg
     2761 acggcggatc agccgcgcct gtccattgtc aaacagtact tccggcagga gcgggcggct
     2821 gttgtaattc gatgacatag acgcgccgta cgcgccggta tcgtgcaata cgaggtaatc
     2881 gccggggatg accgcaggta aggcgcgtgt ttcaaccatt cccccttcct gctgcgtaaa
     2941 aacatcgcct gattcgcata gcggcccggc gaccaccgtc tcgacccacg ggccattttc
     3001 aagcgcgcga ccatccgccg ccagcgccga aatacggtga tagctaccgt acatcgccgg
     3061 gcgcatcaga tcgttaaaac cagcgtcgac cagcacgaaa tggcggcttc ccatctgttt
     3121 tacgctacgc acctgcgtta ccagcacgcc cgattgcgcc accagataac gtccgggttc
     3181 gatctcaagt ttgaccgcat gtcccagatg gcgggcgatt tgctcgcgcg ccgcgttcca
     3241 cagaccatag taatggcgcg tatcaacggg ctcttctccc tcatgataag gtatcgagag
     3301 tccgccgcct gccgaaatcg cctccacatc ctgaccacat tccagcacct ggcgtaccat
     3361 cgcgccgcaa acctgctcca gatggccata atcgacgccg gaaccaatgt gcatatggat
     3421 accgacaagt ttcagtcggt atttctgcat taccgccagc gccgccggaa gatcgctatg
     3481 ccagatgccg tgtttgctgt tttcgccccc ggtgttggtt ttctggctgt ggccgtgacc
     3541 aaagccagga ttcacgcgca accagacgcg atgcccaggc gaaacctgac caagctgcgt
     3601 cagcatatct accgagccgg cattgaccgg aatatgcagt tcactgacgc gcgccagcgt
     3661 ggcggcgtca atcacatcgg cggtaaaaac gatatcatca gggcacgttt gcggatcgta
     3721 gcccgccgcc agcgcacgtt cgatctcccc caatgaaaca gaatccacct tgacaccctg
     3781 cgcgcgcatt aagcgcagga tatgaatgtt cgaacaggct ttttgcgcaa aacgcacgac
     3841 gtcaaactgc tgcagggcgg ctatctgacg gcgaataatg tgcgcgtcat agacccagac
     3901 cggacagccg aattcagcag gcaatctgag caaattttca gcgttaaggt cagtttcagc
     3961 gtgataatgc ggcaatgaca taacaaactc cggaacaggc tttttaacga ttacgccata
     4021 ccttagaaag aataaaaaat atcgttttat tgtcagtcta tgcaaaaatg atatgggata
     4081 aatgattcag ggaaacgtat ggctgccgtt aatttacgtc acattgaaat ttttcatgcc
     4141 gtaatgaccg ccggaaatct caccgaagcg gcgcggctgc tgcatacctc gcagcctacc
     4201 gtcagtcgcg agctggcgcg ttttgagaaa gtgctgggat taacgctgtt tgagcgcaca
     4261 cgcgggcgct tacatccgac ggtgcaaggg ctacgcctgt tcgaagaggt acaacgctcc
     4321 tggtatgggt tggatcgcat cgtcagcgcg gcggaaagtc tgcgcgagtt ccgtcagggc
     4381 gaactctcta tcgcctgcct gccggtcttt tcacaatcct ttttgccgcc gctactaccg
     4441 ccttttttgg cgcgttatcc ggatgtcagc ctgaatattg tgccgcagga gtcgccgttg
     4501 ctggaagagt ggctctccgc tcagcgccac gacttagggc tgacggagac gcttcatgcc
     4561 ccggcaggaa caacccgcac cgagttacta acgctgaatg aagtgtgcgt actgccctgc
     4621 gaccatccgc ttgccgccaa aacggtactg acgccagacg attttcaggg ggaaaacttt
     4681 atcagcctct cccgcctgga cagctatcga cagttgttgg atacgttatt tgccgaacat
     4741 caggtgaagc gcagaatggt ggtggaaacg catagcgcgg cctccgtctg cgcgatggtg
     4801 cgcgccgggg cgggcgtttc gatcgttaac ccgctgaccg cgctggacta tgccgccagc
     4861 ggcgtcaccg tccgccgctt cagcattgac gtgcccttta ccgtcagcct gattcgcccg
     4921 ctacaccgcc ccgcctccgc gctggttgac gccttcagta agcatttaca aacgcatctt
     4981 tcgcgcctgg tcgaaccgct ggaggttatt ctggggccga tgacgaaagc ataaagctca
     5041 cggcatctgc ggcatgaatt gccgtagtat cgaaaaccgg tagcgcgctt tgcgtctggg
     5101 gaacaagcaa acctatttca gtacagccaa aaataacgcc ctgcgcgcct tgcgcagcca
     5161 gttgttcgat aacctgtaaa taatagtggc gcgacgcgtc agtgaatatc ccctgacaga
     5221 gctcgtcaaa aatcacctga ttgatacgcg cccgatcgtc cgcctccggc acgatggtct
     5281 caatcgcaaa ttgctgttcc agccgcccgc gataaaaatc ctgctccatc gtatagcgag
     5341 tccctaatag cgccacgcga tgcaacccct gacgggcgat ggctcgcccg gtagcatccg
     5401 cgatgtgtag gaaaggcaga gaacaacgag attcaataat gtgcgcgatt ttatgcatgg
     5461 tgttggtaca cagcacaata ccttctgcgc ccgcctgctg taacccctgc gcggcctgcg
     5521 ccaggatatc gcccgcttta tcccattcgc cgcggcgttg acatacttca atatcgtgga
     5581 aatctacgct atgcagcagt aagctcgccg agtgcaggcc tcccagctgc tgtttaatgc
     5641 cttcattgat taaacggtaa taagggatag tcgattccca gctcatcccc cccaacagcc
     5701 cgatcgtttt cactgcgctc tcctttttgt aaagcattat ggcagtgaaa caaacttaca
     5761 catccgtttc cagtctattt ttcatcatgc cggataacag gcgtcatccg gcatgggagg
     5821 ggggattaca cgccaatatt tcttagcttc tcgcccgcca ttagcttgcg ttcgatgtgc
     5881 tccagggtga catttttggt ttccggaatc agccagaaag tgatgccgat aaaagcgata
     5941 ttcagcgcgg tgtagagcca gaatgtacct gccgcgccaa tgctgtccaa cagtgtcagg
     6001 aatgtcgcgc cgatgatcat gttcgatacc cagtttgtcg tggttgaaca ggtaatgcca
     6061 aaatcacgac atttcagcgg ctggatttcc gaacacagta tccacaccac cggagcggcg
     6121 ctcatcgcgt aaccggcgat acacatcatc gtcatcccaa cggaaagcca ggagagaccg
     6181 cttgatgccg taccgttatc aaactgcatc aggcagtagc ccaacaccaa tgtccctaac
     6241 gccattacgc tgaaaccgat ttttaacgcc ggtttacgcc cggccttatc gaccgtaaag
     6301 acggcgataa aagtcgcgaa cataaaggtc agtccgacca ccagcgtagc gatcatttgc
     6361 tgttccgtgg tggtaaagcc ggccatttta aaaatgcgcg gcgcatagta cataatgatg
     6421 ttcatgccgg tgaactgctg cattgcctgt agcaacatac cgaggaacac ggcgcggcga
     6481 acattacggt tagctttaaa taatgcccat ccgccctgct tgagtttgag gctttcccga
     6541 atctcattca gttcatcacg ggctttttcc gaggtatcgc gcagcatacg cagcacctct
     6601 tccgcttcga tatggcgacc tttttgcgcc agccagcgcg gactattcgg caggaatacc
     6661 accagaataa tgagcaacac cgcaggcagc gccagcacgc ccaacatcgc gcgccagttg
     6721 ccgctgtagc tgaatgccgt atcggataaa aaagccagca caatgcctaa cgtcaccatc
     6781 agttgataca tactgatcat tttaccgcga acattttcgc tagccatttc agagagataa
     6841 agcggcgcgg tataggacgc aatccctact gctacgccca gtatcacgcg ggcgccaatc
     6901 aatacttcca cgctggaagc aaacgccgac cccagcgagc cgagcacgaa caaaatcgcg
     6961 ccagccatca ggctatactt acgccccagc cgaaatgaaa gccagccgtt aaataatgcg
     7021 ccaattgccg cgccaagcat catactgctg acgacccatt cctgcagccg gctggtcagt
     7081 acgaaatggt cggtaataaa aggcagcgcc ccagcgataa cgccgatatc cagaccaaat
     7141 aacagtcccg ctaccgctgc agaaaccgaa acaaacatat tcatacgtcg tgtgtcgcga
     7201 agcgaacgcg gcgttaaagc agagtcatta atagagacca tattttcctg ccaccacaga
     7261 gtaagacata gcctgaaagt acgggatact cttcctcaag tgtcaggctg gaaacggcat
     7321 aaatatggat taaatggcta cgctatagcg atatgtgatg gatattacac tttttaaatt
     7381 taacgccgtt gccgggtatt ttttcaaacc accaatattt caataagtta aaccatttat
     7441 catagctatt atttaacaat atatggatta agttaaaccc acaatatgga ctatgctaat
     7501 gagatcataa aaaaaccctg tacgaggaca gggctttatc agttttttcg gccaaagagt
     7561 cgattttccc agaaacgcat ttgtcagtag cggattaacg cgccagccaa ccgccatcta
     7621 ccgctatggt atagccgtta atataatcag cggcgctgga tgccaggaag actaccggcc
     7681 ccattaaatc gcccggtagc ccccaacgtc cagccggaat acggtcgaga atttcggcgc
     7741 tacgttgtgc atcagcgcgc aattgctggg tattattcgt ggacatatag cccggcgcga
     7801 tggcgtttac attgatattg tgtttcgccc actcgttcgc catcagacgc gttattccca
     7861 ttacgccgct tttcgacgcg gtataagacg gaacacgaat gccgccctgg aaggaaagca
     7921 tagacgcgat attaataatt ttgccgccgt tgccctgggc aataaaatat tttgccgccg
     7981 cctgagacat aaagaacacg ctcttgatgt tcaggttcat gacgtcatcc cagtcttttt
     8041 ccgtgaaatc aatcgcatct tcacgacgga tcaaacccgc gttattcacc agaatatcaa
     8101 tatgaccgta ttccgccacc gcccgttcca gtagcgccgg aataccatcg atttgacgca
     8161 gatcggctgt caggcttaaa aaacgtcgtc ccagagcggt gacgcgcgca atagtttccg
     8221 tcggttcaac aatgttaata ccgacaatgt cacagcccgc ttccgccagc cctaacgcca
     8281 tcccctgtcc caatccggta tcgcaccccg tcacaaccgc gactttacct tcaagagaaa
     8341 atgcattcaa aatcattgtt aatccttatt tttgtcatgc ctgtcacaca ggcgttatca
     8401 ccggtcgcga ctagcgcaga tcttgtaccg caacgtgatc catgtcatcg aagacctgat
     8461 tttctcccac catgccccaa ataaacgtat aggctttggt gccaacgccg gaatgtattg
     8521 accagcttgg ggaaataacc gcctgttcat tacgcatcac aatatgacgg gtttcctgag
     8581 gctgccccat catatggaaa acgcaactgt cctcttccat attgaaatag aggtaaactt
     8641 ccatacggcg ctcatgggta tggcatggca tggtgttcca tagattgccg ggcgccagtt
     8701 cggtgagtcc catactgagc tgacaggttt ccagtacatc cggtacgaag tatttattga
     8761 tggtgcgacg gttactggtg aggttatcgc ctaaggtgac gggcgcaacg tcggcaggcg
     8821 acactttttt cgtcggataa gcggtgtgcg ctggcgcgca gttgtaataa aacttcgccg
     8881 gtctgctcgc ctcattgctg acgaagacca gctctttcgc ccctttacca atatacagag
     8941 catcacgatg accaatgtca tggcgctgcc cgtcaacgat aatggcgccc gcgccgccaa
     9001 tattaatgac gcccagctcg cggcggtcca gtaatcggga aacgccaagc tgtttaccta
     9061 cttctccgcc gacttcaacg ggatggctga cgggcataat gccgccgaca ataatacggt
     9121 cgatatggct gtagaccatc gtatattcat cagcgacaaa aatattttct attaaaaact
     9181 cgcgtcgcag cgcctgggtg tccagcgttt tagcgtgctc gctatggata ctttgcctta
     9241 cgtccacttt tccctccaat gataaatcga tcgcaacggc ataaaatcaa aacactgttt
     9301 tgatttattt aacggcatca tagtcgcctg gataaaggtt ttcaacaata aataaaacaa
     9361 cgtttcattt ttatgtctgg ttatttttaa aactgctgta gcgatcacga tcggcgctaa
     9421 aacttacgca tttgtctgat tttcagacat gcgcgccaga tgctgtatgc ggttacccag
     9481 ataaaaattg gagcttgttt tagaacgagg tctgatgtgc gaattgaatt aaaagcggta
     9541 cgcgtctgca atgcccgccg cggcaagaag ttctgcgcta taacgaaaaa ggggggtctg
     9601 tcactggctt tgccctcgtg atagagggct ttttatgacg gaatactgaa gcaggaaaag
     9661 ggtggctggc gtaggatcag tcgcgttcaa tggttaaagc aacgccctgg ccgccaccga
     9721 tacacagcgt cgccagacct tttcgcgcgt cgcgtttaac catttcgtgc accagtgaaa
     9781 ccagaattcg acaaccggaa gcgccaatgg gatgccccag cgcaatcgcg ccgccattaa
     9841 cgtttacccg tcgctcatcc cactccagca tttttcctac cgacaacgcc tgggcggcaa
     9901 acgcttcgtt ggcttcgata aggtcgacct ccgtcagttg ccagccggca cgctccagac
     9961 agcgccgggt agcatatacc ggcgcaatcc ccattagcgc a
//
LOCUS       DAGWFR010000147         9978 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.149, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000147 DAGWFR010000000
VERSION     DAGWFR010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 9978)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9978)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9978
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.149"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..480)
                     /gene="ftsN"
                     /locus_tag="MOX77_003596"
     CDS             complement(<1..480)
                     /gene="ftsN"
                     /locus_tag="MOX77_003596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsN"
                     /protein_id="HCA3359021.1"
                     /translation="MAQRDYVRRGQPAPSRRKKSTSRNSRKKQSNMPAVSPAMVAIAA
                     AVLVTFIGGLYFITHHKKEESETLQNQKVTGNGLPPKPEERWRYIKELESRQPGVRTP
                     TEPSAGGEVMNPNQLTSEQRQLLEQMQADMRQQPTQLNEVPWNEQTPEQRQQTLQRQR
                     "
     gene            complement(574..1599)
                     /gene="cytR"
                     /locus_tag="MOX77_003597"
     CDS             complement(574..1599)
                     /gene="cytR"
                     /locus_tag="MOX77_003597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator CytR"
                     /protein_id="HCA3359022.1"
                     /translation="MKSNKQVTAATMKDVALKAKVSTATVSRALMNPDKVSQSTRSRV
                     EQAALEVGYFPQSMGRNVKRNESRTILVIVPDICDPFFSEIIRGIEVTAAEQGYLVLI
                     GDCAHQNQKEKTFLNLIITKQIDGMVLLSSRLPFDASVEEQRNLPPMVMSNEFAPELE
                     LPTVHIDNLTAAFNAMNYLLDLGHKRIGCIAGPEDMPLCHYRLQGYVQALRRSGIVVD
                     PHYIARGDFTFEAGANALKQLLEQPLPPTAVFCHSDVMALGALSWAKRQGLKVPDDLS
                     IIGFDNIALAEFCDPPLTTVAQPRFDIGREAMLLLLDQMQGQNVSSGSRLMDCELIIR
                     GSTRALP"
     gene            complement(1754..3952)
                     /gene="priA"
                     /locus_tag="MOX77_003598"
     CDS             complement(1754..3952)
                     /gene="priA"
                     /locus_tag="MOX77_003598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HCA3359023.1"
                     /translation="MSVAHVALPVPLPRTFDYLLPEGGVAKAGCRVRVPFGKQQERVG
                     IVVSVSDHSELPLDELKSVIEILDNEPIFSPSIWRLLLWAADYYHHPLGDVLFHALPV
                     LLRQGKPASNAPLWYWFATEEGQAVDINSLKRSAKQQQALAALRQGKIWRYQVAELDF
                     TDATLQTLRRKGLCELASETPAFTDWREHYAVAGERLRLNTEQATAVGAIHSASDGFS
                     AWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNTPVEVL
                     HSGLNDSERLSAWLKAKNGEAAIVIGTRSSLFTPFKNLGVIVIDEEHDSSYKQQEGWR
                     YHARDLAVYRAHSEQIPIILGSATPALETLCNVRQKKYRMLRLTRRAGNARPALQHVL
                     DLKGQRLQAGLAPALIARMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDH
                     YYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHMLPVGLGTEQLEQVLAPFFPGVPIS
                     RIDRDTTSRKGALEQHLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSA
                     DFRSAERFAQLYTQVSGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAE
                     RQTLQLPPWTSHVIIRAEDHNNQQAPVFLQQLRNVIQASPLSDDKLWILGPVPALAPK
                     RGGRYRWQILLQHPSRILLQHIISGTLALINTLPEARKVKWVLDVDPIEG"
     gene            4156..4368
                     /gene="rpmE"
                     /locus_tag="MOX77_003599"
     CDS             4156..4368
                     /gene="rpmE"
                     /locus_tag="MOX77_003599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HCA3359024.1"
                     /translation="MKKGIHPNYVEITATCSCGNVIKTHSTVGHDLNLDVCGKCHPFF
                     TGKQRVVDTGGRVERFNKRFSIPGSK"
     gene            complement(4414..5076)
                     /locus_tag="MOX77_003600"
     CDS             complement(4414..5076)
                     /locus_tag="MOX77_003600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02117 family protein"
                     /protein_id="HCA3359025.1"
                     /translation="MKNLFIAWLSLLLYGCTTFPQAVKPTTGGQPSPTEIYIVSHGWH
                     TGIIAPAHDVNTVLPQLKKRFAQETQWYEIGWGDKGFYQSQEITTALTLQAMFWSSGA
                     VMHIVAFSGQPERYFAGSEIKSLLLHTNQRNSLMRYLGRSFARDAEGNLIPLKQGIYG
                     DSQFYAANGRYGILNTCNKWTAKGLESAGLTINPSLKLTAGSVMKAITDHRMCLNKYC
                     YP"
     gene            complement(5277..7066)
                     /locus_tag="MOX77_003601"
                     /pseudo
     CDS             complement(5277..7066)
                     /locus_tag="MOX77_003601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462979.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aryl-sulfate sulfotransferase"
     gene            complement(7522..7839)
                     /gene="metJ"
                     /locus_tag="MOX77_003602"
     CDS             complement(7522..7839)
                     /gene="metJ"
                     /locus_tag="MOX77_003602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015855437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="met regulon transcriptional regulator MetJ"
                     /protein_id="HCA3359026.1"
                     /translation="MAEWSGEYISPYAEHGKKSEQVKKITVSIPLKVLKILTDERTRR
                     QVNNLRHATNSELLCEAFLHAFTGQPLPDDADLRKERSDEIPEAAKEIMREMGIDPET
                     WEY"
     gene            8104..9264
                     /gene="metB"
                     /locus_tag="MOX77_003603"
     CDS             8104..9264
                     /gene="metB"
                     /locus_tag="MOX77_003603"
                     /EC_number="2.5.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine gamma-synthase"
                     /protein_id="HCA3359027.1"
                     /translation="MTRKQATIAVRSGLNDDEQYGCVVPPIHLSSTYNFTGFNEPRAH
                     DYSRRGNPTRDVVQRALAELEGGAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYG
                     GSYRLFDSLATRGCYRVRFVDQGDERALQAALEEKPKLVLVESPSNPLLRVVDIAKIC
                     RLAREAGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVMIAKDPEM
                     VTELAWWANNIGVTGGAFDSYLLLRGLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLY
                     HPSLPNNQGHEIAARQQKGFGAMLSFELDGDEETLRRFLGGLSLFTLAESLGGVESLI
                     SHAATMTHAGMSPQARAAAGISETLLRISTGIEDGEDLIADLENGFRAANKG"
     gene            9267..>9978
                     /gene="metL"
                     /locus_tag="MOX77_003604"
                     /gene_synonym="metM"
     CDS             9267..>9978
                     /gene="metL"
                     /locus_tag="MOX77_003604"
                     /gene_synonym="metM"
                     /EC_number="1.1.1.3"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000110794.1"
                     /note="multifunctional homodimeric enzyme that catalyzes
                     the phosphorylation of aspartate to form
                     aspartyl-4-phosphate as well as conversion of aspartate
                     semialdehyde to homoserine; functions in a number of amino
                     acid biosynthetic pathways; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aspartate kinase/homoserine
                     dehydrogenase II"
                     /protein_id="HCA3359028.1"
                     /translation="MSVIAQAGAKGRQLHKFGGSSLADVKCYLRVAGIMAEYSQPDDM
                     MVVSAAGSTTNQLISWLKLSQTDRLSAHQVLQTLRRYQCDLISGLLPADAADDLTSAF
                     ISDLERLAALLDGGVTDAVYAEIVGHGEIWSARLMSAVLNQQGLDAAWLDARAFLRAE
                     RAAQPQVDEGLSYPLLQQLLAQHPGKRLVVTGFISRNHDGETVLLGRNGSDYSATQIG
                     ALAGVSRVTIWSDVAGVYS"
BASE COUNT         2224 a         2551 c         2698 g         2505 t
ORIGIN      
        1 acgctggcgc tgtagcgttt gctggcgttg ttctggcgtc tgctcgttcc acggcacttc
       61 gttaagttgt gtcggctgct gacgcatatc cgcctgcatc tgctccagga gttgacgctg
      121 ctcgctggtg agctgattcg gattcatgac ttcgccgccg gcggacggtt ccgttggcgt
      181 acgcacgccc ggctggcgac tttccagctc tttgatgtaa cgccagcgct cttccggttt
      241 tggcggaagc ccattgccgg tgactttctg gttttgtagc gtttcggact cttctttctt
      301 atggtgagta atgaagtaca gaccgccgat aaaggtcaca aggacggctg ccgcaatcgc
      361 gaccattgcc ggcgagacgg caggcatgtt gctttgcttc ttccgtgagt tccgtgaggt
      421 gctctttttg cgccgcgaag gagccggttg gccgcgacgt acataatctc gttgtgccac
      481 tatcgtttcg ctgtatttat tcgttcgtca gcccgtcatg ttactgaagc ggcgggcctt
      541 tgaccagaca ggtgagtctt aaagctattt actttagggt aaagcgcgtg tagaaccgcg
      601 aataatcagc tcgcaatcca ttaaacgcga gccgctgctc acattttgcc cctgcatctg
      661 atcgagcaac agcagcatcg cctcgcgacc aatgtcaaaa cgcggctgcg ccacggttgt
      721 caacggaggg tcgcaaaact cggccagcgc gatattgtca aagccgataa tcgacagatc
      781 gtcaggcact ttcagaccct ggcgcttggc ccaggagagg gcgcccagcg ccattacgtc
      841 gctatgacaa aagacggcgg taggcggcaa cggttgctca agcaactgct ttaatgcgtt
      901 tgccccggct tcaaaggtaa agtcgccacg ggcgatgtaa tgcggatcga ccacaatgcc
      961 actgcgtctt aatgcctgta cgtaaccttg taagcgatag tgacagagcg gcatatcttc
     1021 cggccccgca atacaaccaa tccgcttgtg gcccaaatcc aacaggtagt tcatggcatt
     1081 gaacgcggcg gtcaggttat cgatatgtac cgtcggcaat tcaagctccg gcgcaaactc
     1141 attcgacatc accatcggag gcaaattgcg ctgctcctca acgctggcgt caaagggcag
     1201 tcgggaactg agcagtacca tgccgtcgat ctgtttggtg atgatgagat taagaaaggt
     1261 tttttctttc tggttttgat gggcacaatc gccaatcagc accagatacc cctgttctgc
     1321 cgcggtcact tcgataccgc ggataatttc actgaagaag ggatcgcaaa tatccgggac
     1381 aatcaccaaa atcgtacggg attcattgcg ttttacattt cgccccatcg actgcgggaa
     1441 ataacccact tcaagcgcgg cctgttcaac ccggctacgg gtcgactggg agactttatc
     1501 ggggttcatt aacgcgcggg atacggttgc cgtagagact ttcgccttca acgcaacatc
     1561 cttcatcgta gcggcagtaa cctgcttgtt cgatttcact ctttctcctc gcctgggaac
     1621 tgctggcgca gatctatccc tggtaacact catcgaaaac atttttatca gatagtgcgt
     1681 ggaagcggtt acagaatttt cataaaaagt gtgatggatc tttaatttta cgatccgcct
     1741 cgcatcgtgg ggactatcct tcaatcggat cgacgtccag aacccattta actttccgcg
     1801 cttcagggag cgtattgatc aacgccagcg tgccgctgat gatgtgttgc aggagaatcc
     1861 gtgaaggatg ctgaagtaaa atttgccagc gatagcggcc gccgcgtttt ggcgcgaggg
     1921 ccggaaccgg acctaagatc cacagcttat cgtctgatag cgggctggcc tgaatcacat
     1981 tacgcaactg ctggagaaag acgggcgcct gctgattgtt gtgatcctct gcgcgaataa
     2041 tgacgtggct ggtccacggc ggaagctgga gcgtttgccg ttccgccagc gcctgttccg
     2101 caaacgcatc atagccttta tacagtaacg tttgcagcag gggatgctca ggatggtgcg
     2161 tttggagcac cacttcgccc tgtttacccg cgcgcccggc gcggccggaa acctgagtgt
     2221 agagctgggc gaagcgttcc gccgaacgaa aatctgcgga aaaaagcgcg ccatcgacat
     2281 ccagcaacgc caccagcgtg acgtccggga agtgatggcc tttcgccagc atttgtgtgc
     2341 ctatcagaat gcgcgctccg ccgcggtgaa cttccgccag atgctgctcc agcgcgcctt
     2401 tacgactggt ggtatcacgg tcgattcgtg agatcggcac gccggggaag aagggcgcca
     2461 gcacctgctc cagctgttcg gtccctaacc caaccggtag catatgtgtg gagccgcagg
     2521 aggggcactg acgcggtacc ggacgctggc tgtcgcagtg atggcagcgt aaatgatgct
     2581 gcgcctggtg cagcgtgtag tagtgatcgc aacgcgggca ctccgcaatc cagccgcagt
     2641 cgtggcaaag cagcgcgggc gcgaatcccc ggcggttaag aaataaaatt acctgattat
     2701 cggcctggag atgttggcgc atacgggcga taagggcggg cgccagtccc gcctgaagac
     2761 gctgtccttt taaatccagc acatgctgca gggctgggcg ggcgttgcct gcgcgccgcg
     2821 tcagacgcag catccggtat tttttctgcc gcacgttgca tagcgtttcc agggctgggg
     2881 tggcggagcc gagaataatc gggatctgct cgctatgggc gcgatacact gccaaatcgc
     2941 gggcatggta gcgccaccct tcctgctgtt tataagagct gtcgtgctct tcgtcgatga
     3001 caattacgcc aagattttta aacggcgtaa acagcgagga gcgcgtgccg atgacaatcg
     3061 ccgcttcgcc gtttttcgct ttcagccatg ccgaaagacg ctcgctgtcg tttagcccgg
     3121 aatgcagcac ttccaccggc gtgttaaaac gttcgcgaaa acgggcgatc gtttgcggcg
     3181 tcaggccgat ttccggcacc atcaccagcg cctgtttgcc ctgggcgagg acgttttcca
     3241 gcacgctcag atacacttcg gtcttgccgg aaccggttac gcctgccagc aaccaggcgg
     3301 agaaaccgtc cgacgcgctg tgaattgcgc cgactgctgt cgcctgttcg gtatttagcc
     3361 gcaggcgctc tcctgcgacg gcataatgct cccgccagtc ggtaaacgcg ggcgtttcac
     3421 tggcaagctc acaaagcccc ttacgccgca gcgtttgcag cgtggcgtca gtaaaatcaa
     3481 gctcggctac ctgatagcgc cagatctttc cttgccgcag cgccgccagc gcctgttgtt
     3541 gtttggcgga gcgtttcagg ctgttgatgt cgacggcttg cccctcttcg gtggcgaacc
     3601 aataccatag gggcgcgttg ctggctggtt ttccctgacg cagtaaaacc ggcagagcgt
     3661 gaaacagaac gtcgccgagg ggatggtggt agtaatccgc cgcccagagg agtaagcgcc
     3721 agatggaggg agaaaagatt ggctcgttat ccaggatttc aatgaccgat tttaattcat
     3781 cgagcggcaa ttcgctgtgg tcgctaaccg agacgacaat gcccacgcgc tcttgctgct
     3841 tgccgaacgg cacgcgcacg cggcacccgg ctttggcgac cccgccttcc ggcagcaggt
     3901 aatcaaaggt tcggggaagc ggaacgggca aggcaacgtg cgcgacggac atagcatctt
     3961 cctgacttga aatttcgtcg ggtagtatac acattacgat aagggagcgc ggatcagttt
     4021 gcatacggtg gtcaaattct gtatgattcg ccgcctttgg tgcgtgttgt gagcatcaaa
     4081 ccctttacta ttaacttcgc gtggtgtctg gcgttagggc tggaagagcg acgcggcctt
     4141 acactgaggt tccccatgaa aaaaggtatt cacccgaatt acgtagaaat tactgcaacc
     4201 tgttcttgcg gtaatgttat caaaacccac tctaccgtgg gtcacgacct gaacctggac
     4261 gtgtgcggca aatgccaccc gttcttcact ggtaagcagc gtgttgttga taccggtggt
     4321 cgtgttgagc gcttcaacaa gcgcttcagc atccctggca gcaaataagt taccgccaga
     4381 aaaaaaagcg ccgcagggcg ctttttttgt tttctaggga taacagtatt tgttcagaca
     4441 cattctgtga tccgtaatcg ctttcattac gcttcctgcc gtgagtttta acgaaggatt
     4501 tatagtcagt cccgcgcttt ccagcccctt cgctgtccat ttattgcagg tattgagtat
     4561 gccgtagcgg ccattcgcgg cgtaaaactg gctatcgccg taaattcctt gttttaacgg
     4621 aatcagatta ccctctgcgt cacgcgcaaa gctgcggccc agataacgca tcagactgtt
     4681 acgctggttt gtgtgcagga gcagtgattt tatctcgcta ccggcgaaat agcgttctgg
     4741 ttgaccggaa aaggcgacga tgtgcataac cgcgccggat gaccagaaca tggcctggag
     4801 cgtaagcgcg gtggttattt cttgtgactg ataaaagccc ttatcgcccc agccgatttc
     4861 ataccactgc gtctcctgag cgaaccgttt tttaagctgt ggcagaacgg tattaacatc
     4921 atgggccggc gcaataattc ccgtgtgcca gccatgactg acgatataga tttccgtcgg
     4981 ggagggctgt ccgcctgtcg taggttttac ggcttgtgga aaggttgtgc agccatatag
     5041 caataaactt aaccaggcga taaagagatt tttcatgaca tatcaccagc aaaggcgcgg
     5101 tatgttgtgg cgtttgtcta atgacgctgc gcttatcggg tcggtgccgg attggtaatt
     5161 cattgatatt tttgcattcc tctccgaggg caataaggcg aatgtcataa ctacaatacg
     5221 ttttaaccat tcaggcggaa gttggcttcc gcctgtttta cttttactct cacgctttat
     5281 tttttaaaca tctgctctgg atcgataatc agcgcccgat aacccagcat accagcacgg
     5341 ttactgtgta cttttagctc cagcatcaca tcctgagtac cgtctttgac ttcatccaga
     5401 acggaaacga ttggatttgt accgctcatt cccgctgtgg ccgagtacat gaacatcgtt
     5461 ttggtttccg ggcgatattc cgtgacggaa gtaatggcgc tgtaccagtc aaaaccgcgc
     5521 tctttaccat attcccacat ttgggaaacc gtcatatttt ttcgtcaatc tgatattcca
     5581 cgccgcggga atatttcatt gacggcatgg ccggttgttc catgccgcgc gcatcgccgt
     5641 tatcaaaggc ggtcacgacg gttttacctc cggtgctttt ggatggcact aaccaaccgg
     5701 tatgttgtgt ccatgtccag tcaaatccac cgtcgcagtg gtgcgcttcg caggttagcg
     5761 gtttaccgtt gctgtctacg ggtttcagca cttttttcgc cagttcgcct ttccagccgg
     5821 atggatcgga aagtatccat ttcacttttt tatcgcggcc aattttgatg atggcagact
     5881 ggtggcgcga gctaatgata atgctgtcgt cgcgaggatc gtagctgacg gagttaacat
     5941 gcgcccagtt gcggcccggg ccggagcccg cgatatcgcc gaagggttgt tttgcaagct
     6001 gctctttggt catgacctga ccggaatgtt cggcatcgac gctcaaacat accgctccct
     6061 gatccatcgc cagaataaca tcgtcacgat aggggtcgag gatttttggc agatcccagt
     6121 aatcgacggt atcgccgttc tggtcaactt caagaatatg atcacgcaca gtattgatgg
     6181 tgtatttacc atttaatgga taattttctt ttgcgacacg cagcaggtag gtgcctttcg
     6241 gcgtttcggt aatggcgtgc gaaaaatcaa taaatccttt tggcagtcgt ttatcggaaa
     6301 taacgcggcc taagaaatca tatttaaagt aacgttgacc ctggccaaaa ataagattgc
     6361 catcgttaac ctgatggaag cccatcatgg aaccaaagcg cgttatatca tcctggttac
     6421 ggaatttatc aatattcata tagccgcgaa catcgccatt cgtatcgcta atccagttga
     6481 taccggtata atcccagttc gccgcgccgc ctgcgacatg cataatgtgg cctgcccttg
     6541 gcatccccgt tatatggtta aaaagatata agcgattttt aagcgagcta tcgactttaa
     6601 ccggttctac cgtaggaaga acggcagttt gcccggtagt agagggtaat gataccggtg
     6661 cggcgtaaat ggaccacgta taagtttgtt ttttaccttc ttcagtccag tcaactttaa
     6721 ccttattgac ataatctgga tacaagccaa atacaggtat gccgtcatgg gtatttatag
     6781 cctgcgggcc gacatcataa ctgataggga tacctttttc ccctttccct aaaacggtaa
     6841 ccttcacgtt ctgtacatta tgattggctt tattaatgat tgctgttaat gggaaaacgc
     6901 cgccgtaggg ggcgacatcg accataccta atggcccttc atgtactgga atgacatctg
     6961 ctgatgcgac cattggcctg tttgggtcta aaacgcctga ggccaaaacg ctgccgctca
     7021 aacacaggca gcataataca ggtaagactt tccttgtaaa taacatattt atttccccat
     7081 tcgatattat cgataaaatg aatgtatatt aaccttctta tttatcggag atgaaaaaac
     7141 atttaaaaaa gtaaaacaat ccgcggaggg gaataatgat gttggtcaca aatatgaggt
     7201 gttcatggtc tttttaacaa taatcatcgt tatactattt attcagtaaa tatatggcgg
     7261 tgtattatta ttcatgtacg ctttgctacg tgaaacatta aataaatatt ggaattttaa
     7321 atataataaa attatatcga ttatggcatg ccgggaattt tttcaggaaa ataacgaaga
     7381 gaaacttatc atgtctgaca aatttatcca ccgagggcta ttcgggaaga tgaacgttta
     7441 gaacaatgtc ggagatagcc gtgtacaggg gaaatcgtta aaaaagcgcg gccagaggcg
     7501 ttctgaccgc atgctttgct atcagtattc ccacgtttcc gggtcaatcc ccatctcacg
     7561 catgatctct tttgccgctt ccgggatttc atcgctgcgc tcttttcgca gatcggcatc
     7621 atccggcaag ggttgcccgg taaaggcgtg cagaaatgct tcacacaaca gctcgctgtt
     7681 ggtggcgtgg cgcaggttgt tcacctgacg acgcgtacgt tcatcggtga ggatttttaa
     7741 caccttcaga ggaatggaaa ccgtaatttt tttgacttgc tcactcttct taccgtgctc
     7801 agcgtatggg ctgatatatt cgccgctcca ttcagccatg agatacttaa tcctcttcgt
     7861 cattaatatt gaggtctgaa cctgagcccg gaccataatc gcgcgtagtt taccgtagtg
     7921 gcgcggccct gacacgaagt tagcggtcgc agatgtgcgc taatgcatat aattttaacg
     7981 gctatttgcg gtttgctcaa tctatacgca aagaagttta gatgtccaga tgtattgacg
     8041 tctattgtgg tagtggttaa tctgtggcct gactttcacc gactcagcca ggaatatctt
     8101 catatgacgc gtaaacaggc cactatcgca gtgcgtagcg gattaaacga tgacgaacaa
     8161 tacggctgcg ttgtgccgcc aatccatctc tccagtacct ataactttac cggtttcaat
     8221 gagccgcgcg cgcatgatta ttcccgccgc ggtaatccca cgcgtgatgt ggttcagcgc
     8281 gcattagcgg aactggaagg cggcgcgggc gcagtattga cgaataccgg catgtcggcg
     8341 attcatctgg tcaccaccgt tttcctcaag ccgggcgatc tgctggtcgc gccgcatgat
     8401 tgctacggcg gcagttatcg tctgtttgac agtctggcga cgcgcggctg ttatcgtgtg
     8461 cggtttgtcg atcagggcga tgaacgcgcc ttacaggcgg cgctggaaga aaaaccgaag
     8521 ctggtactgg tagaaagtcc aagtaatcca ttgttacgcg tggtggatat tgcgaaaatc
     8581 tgtcggctgg cgcgcgaggc gggcgcagtg agcgtcgttg ataacacatt tttaagcccg
     8641 gcgctgcaaa atccgctggc gttgggtgcc gatctggtgt tgcattcatg cacgaaatat
     8701 ctcaatggtc attcggatgt cgtggccggc gtgatgattg ctaaggatcc ggaaatggtc
     8761 actgaactgg cgtggtgggc gaataatatt ggcgtgaccg gcggggcgtt tgatagctat
     8821 ctgctgctgc gcggtttgcg aactctggtg ccgcgtatgg agctggcgca gcgcaacgcg
     8881 caggcgattg tgaaatatct gcaaacccag ccgttggtga aaaaactgta tcacccgtcg
     8941 ctgccgaata atcagggaca tgagattgcc gcgcgtcagc aaaaaggctt tggcgcaatg
     9001 ttgagttttg aactggatgg ggatgaggag acgctacgtc gttttctggg cgggctgtcg
     9061 ctgtttacgc tggcggaatc tttaggggga gtggaaagtt tgatctctca cgccgccacc
     9121 atgacgcatg ccggtatgtc gccgcaggcg cgtgccgccg ccgggatctc cgaaacgcta
     9181 ctgcgtatct ccaccggtat tgaagatggc gaagatttaa ttgccgacct ggaaaatggc
     9241 ttccgggctg caaacaaggg gtaaacatga gtgtgattgc gcaggcaggg gcgaaaggtc
     9301 gtcaactgca taaatttggc ggcagtagtc tggcggatgt gaagtgttac ctgcgtgtcg
     9361 caggcattat ggcggagtat tcgcagcctg acgatatgat ggtagtgtcc gccgcaggca
     9421 gtaccaccaa ccagttgatt agctggctca agttaagcca gaccgatcgc ctttctgcgc
     9481 atcaggtatt acagacgtta cgccgctacc agtgcgatct gattagcggg ctgcttcccg
     9541 ccgacgcggc agatgactta accagcgctt ttatcagcga tctggaacgt cttgccgcct
     9601 tgctcgacgg cggcgtaacg gatgccgtct atgctgagat cgtcggacac ggcgaaattt
     9661 ggtcggcgag attgatgtcc gccgtcctga atcagcaggg gctggatgcc gcctggctgg
     9721 acgcgcgcgc atttttacgc gccgaacgcg ccgcacagcc gcaggttgat gaaggactat
     9781 cttatccttt attgcaacag ctactggcgc agcatcctgg caaacgtctg gtcgtgaccg
     9841 ggtttatcag ccgcaatcac gacggcgaaa cagtcctgtt aggccgtaac ggttccgact
     9901 attccgccac gcaaatcggc gcgttggcgg gcgtttcccg cgtgaccatc tggagcgatg
     9961 tcgcgggcgt ttatagcg
//
LOCUS       DAGWFR010000148         9921 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.150, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000148 DAGWFR010000000
VERSION     DAGWFR010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 9921)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9921)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9921
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.150"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..1047)
                     /gene="carA"
                     /locus_tag="MOX77_003605"
     CDS             complement(<1..1047)
                     /gene="carA"
                     /locus_tag="MOX77_003605"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HCA3359029.1"
                     /translation="MIKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILT
                     DPSYSRQIVTLTYPHIGNVGTNEADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYL
                     KRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDSPDAKLALEKAKAFPGLNGMDLAK
                     EVTTAETYRWTQGSWTLKDGLPEAKSEDDLPFHVVAYDFGAKRNILRMLVDRGCRLTV
                     VPAQTSAEEVLKMNPDGIFLSNGPGDPAPCDYAIEAIKKFLQTDIPVFGICLGHQLLA
                     LASGAKTVKMKFGHHGGNHPVKDMDRNVVMITAQNHGFAVDEDSLPANLRVTHKSLFD
                     GTLQGIHRTDKPAFS"
     gene            complement(1552..1753)
                     /locus_tag="MOX77_003606"
                     /pseudo
     CDS             complement(1552..1753)
                     /locus_tag="MOX77_003606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_446529.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(1909..2730)
                     /gene="dapB"
                     /locus_tag="MOX77_003607"
     CDS             complement(1909..2730)
                     /gene="dapB"
                     /locus_tag="MOX77_003607"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HCA3359030.1"
                     /translation="MHEAQIRVAIAGAGGRMGRQLIQAAMAMEGVQLGAALEREGSSL
                     LGSDAGELAGAGKSGVIVQSSLEAVKDDFDVFIDFTRPEGTLTHLAFCRQHGKGMVIG
                     TTGFDDAGKQAIREASQEIAIVFAANFSVGVNVMLKLLEKAAKVMGDYSDIEIIEAHH
                     RHKVDAPSGTALAMGEAIAGALDKDLKDCAVYSREGYTGERVPGTIGFATVRAGDIVG
                     EHTAMFADIGERVEITHKASSRMTFANGALRSALWLKTKKNGLFDMRDVLGLDVL"
     gene            complement(2910..3818)
                     /gene="citG"
                     /locus_tag="MOX77_003608"
     CDS             complement(2910..3818)
                     /gene="citG"
                     /locus_tag="MOX77_003608"
                     /EC_number="2.4.2.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triphosphoribosyl-dephospho-CoA synthase CitG"
                     /protein_id="HCA3359031.1"
                     /translation="MNVSVVTERRTPAYSSLAAGELNGLVARALLTEARLTPKPGLVD
                     IRNSGAHRDMDLAAFERSTTAIAPWMEKFFIMGNNTAALAAENVLVMLRPLGMACEND
                     MLQATNGVNTHRGAIFAFGLLSAAIGRLLARGEPLEQNRICDQVARLSRNIVAHELSA
                     RKAGKLTKSETHFQCYGLSGARGEAESGFRTVRTQALPVFNRVVQEHDDTHLALLQTL
                     LHLMAWNDDTNLVSRGGLEGLYYVQQQAQKLLWQGGVLVEGGIEAMQFLDDELILRNL
                     SPGGSADLLAVTWFLSHFPAGSLYPE"
     gene            complement(3796..4347)
                     /gene="citX"
                     /locus_tag="MOX77_003609"
     CDS             complement(3796..4347)
                     /gene="citX"
                     /locus_tag="MOX77_003609"
                     /EC_number="2.7.7.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate lyase holo-[acyl-carrier protein]
                     synthase"
                     /protein_id="HCA3359032.1"
                     /translation="MKGTDLLYQGQAVTLEEMLQARDKRAARQRQALNCYRLPLISLT
                     LVAPGAVKNSAVWRRVADYAIAEILALCEQKEWVNVWEMQVNERSGPEWMAAVCAPAM
                     ALKQHMSTLEMSHPLGRLWDIDIIDSDGKSLSRRELGHPARPCLICQQDAHLCARGKH
                     HTLDLLLDEIARRIECYERERCD"
     gene            complement(4347..5867)
                     /gene="citF"
                     /locus_tag="MOX77_003610"
     CDS             complement(4347..5867)
                     /gene="citF"
                     /locus_tag="MOX77_003610"
                     /EC_number="2.8.3.10"
                     /EC_number="4.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate lyase subunit alpha"
                     /protein_id="HCA3359033.1"
                     /translation="MKETVTMLNQQYVVPEGLQPYQGVTVNSPWLASETEKRRRKICD
                     SLEEAIRRSGLKNGMTISFHHAFRGGDKVVNMVMAKLAEMGFRDLTLASSSLIDAHWP
                     LIEHIKNGVVRQIYTSGLRGKLGEEISAGLMENPVQIHSHGGRVKLIQSGELNIDVAF
                     LGVPCCDEFGNANGFSGKSRCGSLGYAQVDAQYAKCVVLLTEEWVEFPNYPASIAQDQ
                     VDLIVQVDEVGDPEKITAGAIRLSSNPRELLIARQAANVIEHSGYFCDGFSLQTGTGG
                     ASLAVTRFLEDKMRRHNITASFGLGGITGTMVDLHEKGLIKALLDTQSFDGDAARSLA
                     QNPHHIEISTNQYANPGSKGAACERLNVVMLSALEIDVNFNVNVMTGSNGVLCGASGG
                     HSDTAAGADLTIITAPLVRGRIPCVVEKVLTTVTLGASVDVLVTDHGIAVNPARQDLL
                     DNLRAAGVALMTIEQLQQRAEQLTGKPQPIEFTDRVVAVVRYRDGSVIDVIRQVKG"
     gene            complement(5878..6747)
                     /gene="citE"
                     /locus_tag="MOX77_003611"
     CDS             complement(5878..6747)
                     /gene="citE"
                     /locus_tag="MOX77_003611"
                     /EC_number="4.1.3.34"
                     /EC_number="4.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate (pro-3S)-lyase subunit beta"
                     /protein_id="HCA3359034.1"
                     /translation="MRPRRSMLFIPGANAAMLSTSFVYGADAVMFDLEDAVALREKDT
                     ARLLVHHALQHPFYQDVEKVVRINPLNTPFGLADLEAVVRGGADIVRLPKTDSKNDVL
                     ELEAQVERIERECGREVGSTRLMAAIESAKGVVNAVDIATSSPRMVAIALAAFDYVMD
                     MGTSRGDGTELFYARCAVLHAARVAGIAAYDVVWSDINNEEGFLKEVQLAKGLGFNGK
                     SLVNPRQIELLHQAYSPTRKEVEHAHEVIAAAEEAESRGLGVVSLNGKMIDGPIIDHA
                     RKVVALSASGIRD"
     gene            complement(6744..7037)
                     /gene="citD"
                     /locus_tag="MOX77_003612"
     CDS             complement(6744..7037)
                     /gene="citD"
                     /locus_tag="MOX77_003612"
                     /EC_number="4.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate lyase acyl carrier protein"
                     /protein_id="HCA3359035.1"
                     /translation="MKIIKDALAGTLESSDVMIRIGPSSEPGIRLELESLVKQQFGAA
                     IEQVVRETLAKLGVERALVSVDDKGALECILRARVQAAALRAAEQTEIQWSAL"
     gene            complement(7067..8110)
                     /gene="citC"
                     /locus_tag="MOX77_003613"
     CDS             complement(7067..8110)
                     /gene="citC"
                     /locus_tag="MOX77_003613"
                     /EC_number="6.2.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="[citrate (pro-3S)-lyase] ligase"
                     /protein_id="HCA3359036.1"
                     /translation="MQNRVNLIFKRIYLQKDVLRRESVAMFLEGVGLALEDDCEIAVC
                     AYWQGEIVGCGSLAGNVLKCIAVSPVLQGEGLSLKLLTELLTLAYELNRSELFLFTKP
                     QNRLLFSGAGFWPIAQAGELAVLMENSSERLARFCRQLALYRQPGKTIGAIVMNANPF
                     TLGHRYLVEQAAAACDWLHLFVVKEDASFFSYTDRWALIEQGIAGIDNVTLHSGSAYM
                     ISRATFPGYFLKEKGVVDDCHCQIDLQLFREHLAPALGITHRFVGSEPFCPLTCAYNQ
                     RMHDILHDPKRSGPVIEVVELARVEKNGTAISASRVRKLYSERNWPAISALVPAGTLA
                     YLQRHAARHTETI"
     gene            8355..9695
                     /gene="citS"
                     /locus_tag="MOX77_003614"
     CDS             8355..9695
                     /gene="citS"
                     /locus_tag="MOX77_003614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate/sodium symporter CitS"
                     /protein_id="HCA3359037.1"
                     /translation="MTNMTQASATEKKGASDLLRFKIFGMPLPLYAFALITLLLSHFY
                     NAIPTDLVGGFALMFVMGAIFGEIGKRLPIFNKYIGGAPVMIFLVAAYFVYAGIFTQK
                     EIDAISNVMDKSNFLNLFIAVLITGAILSVNRKLLLKSLLGYIPTILAGIVGASLFGI
                     VIGLCFGIPVDRIMMLYVLPIMGGGNGAGAVPLSEIYHSVTGRSREEYYSTAIAILTI
                     ANIFAIIFAALLDMIGKKYTWLSGEGELVRKASFKTEDDEKAGQITHRETAVGMVLST
                     TCFLLAYVVAKKILPSIGGVSIHYFAWMVLIVAALNASGLCSPEIKAGAKRLSDFFSK
                     QLLWVLMVGVGVCYTDLQEIIDALTFANVVIAAIIVVGAVVGAAIGGWLIGFYPIESS
                     ITAGLCMANRGGSGDLEVLSACNRMNLISYAQISSRLGGGIVLVIASIVFSMMV"
     gene            9854..>9921
                     /locus_tag="MOX77_003615"
     CDS             9854..>9921
                     /locus_tag="MOX77_003615"
                     /EC_number="4.1.1.112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459061.1"
                     /note="catalyzes the decarboxylation of oxaloacetate to
                     form pyruvate and carbon dioxide; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxaloacetate decarboxylase subunit gamma"
                     /protein_id="HCA3359038.1"
                     /translation="MNEAVLLGEGFTLMFLGMGFVL"
BASE COUNT         2402 a         2772 c         2356 g         2391 t
ORIGIN      
        1 gctgaacgcc ggtttgtcgg tacggtgaat gccctgcagg gtgccgtcga acagcgactt
       61 gtgggtcacg cgcaggttgg cgggcagcga gtcttcatcc accgcaaatc cgtggttctg
      121 cgcggtgatc atcaccacgt ttctgtccat atcttttacc ggatggttgc cgccgtgatg
      181 gccgaacttc atcttaacgg tcttcgcacc gctcgccagc gccagcagtt gatggccgag
      241 gcagatgccg aacacaggaa tgtcggtctg gaggaatttc ttaatcgcct cgatggcgta
      301 gtcgcacggc gccgggtcgc cagggccgtt cgacaggaag atgccgtccg gattcatttt
      361 cagcacctct tcagcagagg tttgcgctgg caccaccgtc aggcggcagc cgcgatccac
      421 cagcatacgt agaatgttgc gcttggcgcc aaaatcgtag gccaccacgt ggaacggcag
      481 gtcatcctca gatttcgctt ccggtaaacc gtctttcagc gtccagctac cctgcgtcca
      541 gcggtaagtt tccgccgtgg tcacttcttt cgccagatcc ataccgttca gtccaggaaa
      601 tgctttcgct ttttccagcg ccagcttcgc atccgggcta tcgcctgcaa tgatgcagcc
      661 gttctgtgcg cctttctcac gcagcagtcg ggtcagcttg cgggtatcga tatcggcaat
      721 cgccacgatg ttatggcgtt tcaggtaaga agagaggtct tcggtgttac ggaagttgct
      781 ggcaatcaac ggcagatcgc gaatcactaa accttgcgca tgaacctgag aagattcttc
      841 atcggcttca ttggtgccga cattaccaat atggggataa gtaagagtga cgatttggcg
      901 ggaataggaa ggatcagtga ggatttcttg ataaccggtc attgaagtat tgaaaacgac
      961 ttccccaacc gccgaacctg ttgcccctat ggcccgaccg tgaaactggg ttccgtcttc
     1021 cagaaccaat agcgctgact taatcaaaac accctccaga gaatattcac tcactttatt
     1081 tgcatatcaa ttcattcagt cagtatgaag caatgcaaat ttgcttaccc gtggatttct
     1141 ggcaaacggc ggcattctga agttaagccg gataaaagtc aacttaaagc gggtattttt
     1201 tatgttattt tgcacattat aaggaagtta ttctgtttaa taggcaaaaa gatcaactaa
     1261 gtgacgatag aaaacgcttg cgcttccttg agttcgcaaa aaactggctg ccatgataaa
     1321 aagtggacca aatggtcaaa tttcacatta aaacaacaaa aaacaacgat aaaaattcat
     1381 ttaatagtca ttaatgtcat taaatgcata aaaattcaaa ataaatcaaa ttaacaacaa
     1441 aaacatttta aaaatcaata ccttaaaaat ataaaaaaca aatcaaatgc atcataaaat
     1501 caacaaaaaa cagcaaatta agactatata atgataactc caatttcgat attaatatct
     1561 aacttctttt tctttaagac aggcgcatac gattggacca caaacagcct cactacagca
     1621 taaaaaagct aacttattga agcaaaagag ataaaacgat cccgtggaac agcactaacc
     1681 ccccaatgga tatcagtctt atcagtctgg tcgaggtgcc ttttgcatac ggtaagccac
     1741 tgcggcagaa catgtcgtgg gagaagaaac tgtcgaaaca tgaatggtga aaggcgttat
     1801 ttatctgacc gaataaccga ggggcaaaaa caaaagggca ataatatatt gccctttgta
     1861 atcaattaat cttgattacc acaaccacat cacgaaggta tttagtcgct ataatacatc
     1921 cagccccagc acatcccgca tgtcaaatag cccatttttc ttcgttttta gccataacgc
     1981 cgatcgcaac gcgccatttg caaacgtcat gcggctggaa gctttatgcg taatctctac
     2041 gcgctcgcca atatcggcaa acatcgcggt atgttcgccg acgatgtcgc ccgcccgaac
     2101 ggttgcaaag ccaatcgttc ccggtacgcg ctcgccggta taaccttcac gcgagtagac
     2161 cgcgcagtcc ttcagatctt tatccagcgc cccggcgatt gcctcgccca ttgccagcgc
     2221 tgtccccgac ggtgcatcca ctttatggcg gtggtgcgct tcaataattt caatatcgct
     2281 atagtcgccc attaccttcg cggctttctc cagcagcttg agcatgacgt taacgccgac
     2341 gctaaagttt gcggcgaaaa cgatcgcaat ctcttgcgac gcctcacgaa tggcctgttt
     2401 accggcgtcg tcaaagccgg tagtaccaat caccatccct ttaccatgct ggcggcaaaa
     2461 cgccagatgc gtcaacgtgc cttccggacg ggtaaaatcg atgaaaacgt caaaatcatc
     2521 ttttaccgcc tcaaggctgc tttgaacgat cacgccggac tttcccgccc ccgccagttc
     2581 gccagcatcg ctgcccagca aggaagagcc ttcgcgctcc agcgcggcac ccagctgaac
     2641 accttccatc gccatggcgg cctggattaa ctgccgtccc atgcggccac cggcgccggc
     2701 aatggcgacg cggatttgtg cttcatgcat agctattctc ttttgtaaaa attgcgtaaa
     2761 ccgttttcag agtaaccagc gcgcccggag gccgccatct aaaatcgccg ataattagaa
     2821 attaatgata aacagggagc gatatcagta aaagacatga ttcatcccac aggatgaatc
     2881 attgctggag agaatgaaag aagagaaact tactcaggat agagggaacc ggcaggaaaa
     2941 tgacttaaaa accaggtcac tgccagtaaa tccgcgctac cgccagggct taagttacgc
     3001 aggatgagtt catcatcgag gaactgcatc gcttcaatgc ccccctcaac caatacgccc
     3061 ccttgccaca acaatttttg tgcctgctgc tgcacgtagt aaagcccttc caggcctccc
     3121 cgtgacacca gattggtatc atcattccac gccatcagat gcaacaatgt ttgcagcagg
     3181 gcaagatggg tatcgtcatg ctcctgcacg acccggttaa acaccggcaa agcctgcgtt
     3241 ctgacggttc gaaaaccgct ttccgcttct ccccgcgcgc ccgacaggcc ataacactgg
     3301 aaatgggttt cactctttgt cagttttccc gcttttcttg ctgagagctc gtgggcaaca
     3361 atattccgac tcaggcgagc aacctggtcg cagatacgat tttgctccaa cggttctccc
     3421 cgcgcgagaa gtcggccaat cgctgcgctc agcaggccaa aagcgaaaat cgccccgcga
     3481 tgggtattca caccattggt cgcctgtagc atatcgttct cacaggccat ccccagcgga
     3541 cgcagcatca ccaggacatt ttctgccgcc agcgccgccg tgttgttgcc catgataaaa
     3601 aacttttcca tccacggagc aatggcggta gtgctacgtt caaatgccgc cagatccata
     3661 tccctatgcg ctcccgaatt acgaatatcg accagaccgg gttttggtgt cagcctggct
     3721 tccgtcagca gcgctcttgc aaccaaccca ttaagttcgc cagccgccag cgatgagtac
     3781 gctggcgtac gccgttcagt cacaacgctc acgttcatag cattcaatcc ttcgtgcaat
     3841 ttcatccaac aaaaggtcaa gggtgtgatg cttgccccgg gcacagagat gagcatcctg
     3901 ctggcatatc aaacatggcc gggcaggatg cccgagttca cggcgtgata gcgacttacc
     3961 gtcgctatca ataatgtcga tgtcccaaag ccgccctaac ggatggctca tctctagtgt
     4021 cgacatgtgc tgtttcaacg ccattgccgg cgcacagacc gctgccatcc attccgggcc
     4081 gctgcgttca tttacctgca tttcccagac gttgacccac tccttctgtt cgcaaagcgc
     4141 cagtatttcg gcaattgcgt aatcggcgac acgccgccag accgctgagt ttttaacggc
     4201 gcccggtgca accagcgtga gggaaatcaa cggtagccga tagcagttca acgcctgacg
     4261 ctgcctggcg gcacgtttat cgcgcgcttg tagcatctcc tccagcgtaa ctgcctggcc
     4321 ctggtacagc aggtctgtgc ccttcatcag cctttaacct ggcgaatcac gtcaatcact
     4381 gaaccgtcgc gataacgcac cacagccacc acccgatcgg taaactcaat cggctgcggt
     4441 ttaccggtca gttgctcggc gcgctgttgc agttgttcga tggtcatcag cgccacgccc
     4501 gcagcacgca ggttatcaag cagatcctga cgcgcagggt tcaccgcaat accatggtcg
     4561 gtaaccagca catcaacgct tgcccctagc gtgacggtag tcagcacttt ttctaccacg
     4621 caaggaatac gcccgcgcac cagcggtgcg gtaataatgg tgagatcggc ccctgctgcc
     4681 gtatcgctat ggccgcccga tgcgccacac agtacgccgt ttgaaccggt catcacgtta
     4741 acgttgaaat tcacgtcaat ttccagcgcg ctcagcatca ccacattcag gcgttcgcat
     4801 gccgcgcctt tagagccggg gttcgcgtat tgattggttg aaatttcaat atgatgcggg
     4861 ttctgcgcca gcgaacgggc tgcatcgcca tcgaatgatt gcgtatccag cagcgctttg
     4921 atcaaccctt tctcatgcag atccaccatg gtgccggtga tcccgcccag gccaaaactc
     4981 gccgtaatgt tgtggcgacg cattttgtct tccaggaaac gggtgaccgc cagagaagcg
     5041 ccaccggtgc cggtttgcag cgagaaaccg tcacaaaaat aacccgagtg ttcgatcaca
     5101 ttggccgcct gccgggcgat caacagttca cgcgggttgc tggacagacg aatcgcgccc
     5161 gcagtgattt tttccggatc ccctacttcg tccacctgta cgatcaaatc aacctgatcc
     5221 tgcgcgatac tggccggata attggggaac tcgacccact cttcagtcag gagcaccaca
     5281 catttagcgt actgcgcatc aacctgcgca taccccaaag agccgcagcg tgacttgccg
     5341 ctaaaaccgt tcgcattacc aaattcgtcg cagcacggca cgccgaggaa agcgacatca
     5401 atattcagct caccgctctg aatcagtttt acgcggccgc cgtgagagtg gatctgtacc
     5461 gggttttcca tcaggccagc ggagatctct tcccctaact tgccgcgcag cccagaggtg
     5521 taaatctgcc gcaccacgcc atttttaatg tgttcgataa gcggccagtg ggcatcgatt
     5581 aacgagctgg aggcaagcgt cagatcgcgg aatcccattt ccgccagttt cgccatcacc
     5641 atattgacaa ctttgtcgcc accacgaaac gcatggtgga aggatatcgt catgccattt
     5701 ttaagcccgg aacgacggat agcctcttca agcgagtcac aaattttacg ccgacgcttt
     5761 tccgtttcac tggcaagcca cgggctattc actgttaccc cctggtaggg ttgtaatcct
     5821 tccggtacga catattgctg attgagcata gttacagtct ctttcatggt tccttcctta
     5881 atcacgaata ccggaagccg acagcgccac cactttgcgc gcgtggtcga taatcgggcc
     5941 gtcaatcatt ttgccgttga gtgaaacgac gcccagaccg cgagactcag cctcttcagc
     6001 ggcggcaatc acctcgtgcg catgctcaac ttctttacgc gtcggagaat aagcctgatg
     6061 taacagctca atctgacgtg gattcactaa ggacttaccg ttaaaaccaa gccctttcgc
     6121 caactgcact tccttcagga agccttcttc attattgata tccgaccaaa cgacatcata
     6181 ggcggcaata cccgcaacgc gcgccgcatg cagcactgcg cagcgggcgt agaacagctc
     6241 ggtgccatcg ccccggctgg tgcccatatc catcacgtaa tcaaatgccg ccagcgcaat
     6301 tgccaccatg cgcgggctgg aggtggcgat gtcgacggca ttgaccacgc ctttcgctga
     6361 ttcgatcgcc gccatcagcc tggtactgcc gacttcacgt ccacattcac gttcgatccg
     6421 ttcaacctgc gcttccagct ccagcacatc gtttttgctg tcggttttcg gcagacgcac
     6481 gatatccgcg ccaccacgca cgacggcctc aagatcggcc agaccgaatg gcgtgttcag
     6541 tggattaatg cgcaccactt tttcaacatc ctgatagaac ggatgttgaa gcgcgtgatg
     6601 gactaaaaga cgggcggtat ctttctcacg taatgctacg gcgtcttcta agtcgaacat
     6661 caccgcgtcc gcaccataga caaacgaggt gctcaacatg gccgcatttg cgccggggat
     6721 aaacaacata ctgcgacgag gtctcataac gcactccatt gaatttccgt ttgttctgca
     6781 gcgcgtaacg ccgccgcctg cactcgggcg cgtaaaatac actccagcgc gcctttgtca
     6841 tcgacgctaa ccagcgcgcg ttcaacgccc agcttcgcca gcgtttcccg aaccacctgc
     6901 tcaatcgccg cgccaaactg ctgcttcacc agactctcta gctccagccg aattcctggc
     6961 tcgctggatg gaccaatcct gatcatcaca tcgctggatt ccagcgtgcc tgccagggca
     7021 tctttaatga ttttcattag ttatgttcct tgttaacggt gttacgtcat atggtttcag
     7081 tgtgtctggc ggcatgccgc tgcagatatg ccagggtgcc agcaggcacc agcgcgctta
     7141 ttgccggcca attacgttcg ctatacagtt ttctgacgcg agaggcggaa atagccgtgc
     7201 cgtttttctc cacccgcgcc agctcgacga cctcaataac cgggccgctg cgcttcggat
     7261 cgtgtaaaat gtcgtgcatc cgctggttat aggcacaggt cagaggacaa aacggctcac
     7321 tgccgacaaa acgatgggta atccccagcg ctggagccag atgttcacgg aagagttgca
     7381 gatcgatctg gcaatggcag tcgtccacaa cccctttttc tttgaggaaa tagccgggaa
     7441 acgtcgcacg cgagatcata taagcggagc cggaatgcaa cgtgacgttg tcaatgcccg
     7501 cgattccttg ttcgatcagc gcccaacggt cggtatagga aaaaaatgaa gcatcttctt
     7561 tgactacaaa cagatgcaac cagtcacagg ccgcagccgc ttgctccacc agataacggt
     7621 ggcccaaggt aaacggattg gcgttcatga caatggcgcc gatcgttttt cccggttgac
     7681 gataaagcgc cagttggcga caaaagcgcg ctaaccgttc actgctgttc tccattaaca
     7741 ccgccagctc acctgcctgc gcaatgggcc aaaaccccgc gccagaaaac agcaaccgat
     7801 tttgcggctt agtgaacagg aaaagctcgc tgcggtttaa ctcgtaggcc aatgtaagca
     7861 gctcagtcag cagtttgagg ctgagccctt ccccttgtaa aaccggggaa acggcgatgc
     7921 atttcagtac gtttccggcc agcgagccgc atccaactat ctcaccctgc caatatgcgc
     7981 ataccgcgat ttcacaatca tcttccaggg cgagtcccac gccctccaga aacatggcga
     8041 ccgactcgcg acgcaataca tccttttgca aataaatgcg tttaaatatt agattcactc
     8101 tattctgcat ccgtcagcaa ataacgttgc atatttcgcc agcgtttgta ttactcgtct
     8161 ggaatagaca tcacactttc ccccttgctt ttataagctt tatggttttt atttccttaa
     8221 ttaaccagag ttaataaaaa taattaaatt aattaaaaac acaaccattc agtgaagata
     8281 gtcacatctc acggttcatt gaatttatta gtatgcgcgg gtcttgttac ccatcaatac
     8341 acaggaaaat gtttatgacc aacatgaccc aggcttcggc gacggagaaa aagggggcca
     8401 gcgatttact cagattcaaa atctttggta tgccgctacc gctttatgcc tttgcattaa
     8461 ttactttatt actgtctcat ttctataatg ctataccgac tgacttagtc ggtggttttg
     8521 ctcttatgtt tgttatgggg gccatttttg gtgaaatcgg caaacgttta ccgatcttca
     8581 ataaatatat tggcggcgca ccggttatga tatttctggt tgcagcttat tttgtctatg
     8641 ctggcatatt tacgcagaaa gaaattgatg cgatcagcaa cgtaatggat aaaagcaact
     8701 tccttaacct gtttatcgca gtgttgatca caggcgcgat cctgtcggta aaccgtaagc
     8761 tgctattaaa atcactgctg ggctatatcc caaccatcct cgccgggatt gtcggcgcgt
     8821 cccttttcgg tatcgtcatt ggtttgtgct tcggtatccc ggtcgaccgt atcatgatgc
     8881 tatacgttct gccgattatg ggcggtggta acggcgcagg cgccgtgcct ctgtctgaaa
     8941 tttatcactc ggttaccgga cgttctcgcg aagagtatta ctcaacggct attgctattc
     9001 tgaccattgc gaatatcttc gccattattt tcgccgccct cctcgatatg ataggcaaaa
     9061 aatacacctg gcttagcggt gaaggtgaat tggttcgtaa ggcttccttc aaaaccgaag
     9121 atgatgaaaa ggccggtcag attacccatc gtgaaacggc ggttggcatg gtgttatcca
     9181 ccacctgctt cctgctggcc tatgttgttg ccaagaaaat tctgccaagc atcggcggcg
     9241 tctctattca ctacttcgcc tggatggtcc tgattgttgc tgcgctgaac gcatcaggtc
     9301 tttgctcacc ggagattaaa gccggggcga aacgtctttc tgacttcttc tccaaacaac
     9361 tgctgtgggt gctgatggta ggtgtgggtg tttgctacac cgatctgcaa gagatcatcg
     9421 atgccctgac gttcgcgaac gtcgttatcg ccgcgatcat tgtggtcggc gctgtcgttg
     9481 gcgcagctat cgggggctgg ttgattggct tctacccgat tgaatcatcc attactgcgg
     9541 gtctttgtat ggccaaccgc ggcggctccg gcgatctgga agtgctctcc gcctgtaacc
     9601 gtatgaacct catttcatat gcacaaattt cctctcgtct gggcggcggt attgtgctgg
     9661 ttatcgctag catcgtgttc agcatgatgg tgtaaaaaaa cgcacggcgg tgtctttgcc
     9721 gcaaacgacc tggagaaaag tagaggccaa agccagaggt ggccaaggga aatccactct
     9781 actccttagc cggattcacc aggaaggttg tcgtcaaggc caccgtcgtg cctctcatta
     9841 tggaaaatga ttcatgaatg aagctgtatt actgggtgaa ggtttcaccc tgatgttttt
     9901 agggatgggg ttcgtactga g
//
LOCUS       DAGWFR010000149         9912 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.151, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000149 DAGWFR010000000
VERSION     DAGWFR010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 9912)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9912)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9912
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.151"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..1715)
                     /locus_tag="MOX77_003616"
     CDS             complement(<1..1715)
                     /locus_tag="MOX77_003616"
                     /EC_number="1.7.99.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase subunit alpha"
                     /protein_id="HCA3359039.1"
                     /translation="MSKFLDRFRYFKQKGETFADGHGQLLETNRDWEDGYRQRWQHDK
                     IVRSTHGVNCTGSCSWKIYVKNGLVTWETQQTDYPRTRPDMPNHEPRGCPRGASYSWY
                     LYSANRLKYPLMRKRLMKMWREAKKLHRDPVEAWASIIEDADKAKSFKQARGRGGFVR
                     SSWQEVNELIAASNVYTVKTYGPDRVAGFSPIPAMSMVSYASGARYLSLIGGTCLSFY
                     DWYCDLPPASPQTWGEQTDVPESADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGT
                     KTVAVTPDYAEIAKLCDLWLAPKQGTDAAMALAMGHVMLREFHLDNPRQYFTDYVRRY
                     TDMPMLVMLEERDGYYAAGRMLRAADLVDSLGQENNPEWKTVAINSNGEMVAPNGSIG
                     FRWGEKGKWNLEQRDGTTGAETELQLSLLGSQDEIADVGFPYFGGEGSEYFNHVALDN
                     VLLHKLPAKRLQLADGSSALVTTVYDLTMANYGLERGLNDENCAASYDDTKAYTPAWA
                     EQITGVPRAQIIRIAREFADNADKTHGRSMIIVGAGLNHWYHLDMNYRGLINMLVFCG
                     CVGQSG"
     gene            complement(2103..3500)
                     /gene="narK"
                     /locus_tag="MOX77_003617"
     CDS             complement(2103..3500)
                     /gene="narK"
                     /locus_tag="MOX77_003617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate transporter NarK"
                     /protein_id="HCA3359040.1"
                     /translation="MSHSSAPERATGAVITEWRPEDPAFWQQRGHRVASRNLWISVPC
                     LLLAFCVWMLFSAVAVNLPKVGFNFTTDQLFMLTALPSVSGALLRVPYSFMVPLFGGR
                     RWTAFSTGILIVPCVWLGFAVQDTSTPFSTFIIISLLCGFAGANFASSMANISFFFPK
                     QKQGGALGLNGGLGNMGVSVMQLVAPLVVSLSIFAAFGSHGVEQPDGSQLYLANAAWI
                     WVPFLAIFTLAAWFGMNELATSKASLKEQLPVLKRGHLWIMSLLYLATFGSFIGFSAG
                     FAMLSKTQFPDVQILHYAFFGPFIGALARSAGGAISDRLGGTRVTLINFVLMAIFSGL
                     LFLTLPTGGVGGSFIAFYGVFLALFLTAGLGSGSTFQMISVIFRKLTMDRVKAEGGSD
                     ERAMREAATDTAAALGFISAIGAIGGFFIPKAFGSSLALTGSPVGAMKVFLIFYIACV
                     VITWAVYGRHSKNKK"
     gene            3840..5636
                     /gene="narX"
                     /locus_tag="MOX77_003618"
     CDS             3840..5636
                     /gene="narX"
                     /locus_tag="MOX77_003618"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite two-component system sensor
                     histidine kinase NarX"
                     /protein_id="HCA3359041.1"
                     /translation="MFKRCFSPLTLVNQLALIVMLSTAIGVAGMAVSGWLVQGVQGSA
                     HAINKAGSLRMQSYRLLAAVPLDAKDQKLLDEMEQTAFSPELTRAAERDGQQKQLKAL
                     QDYWHNELSPRLQHAQNAHAVAEDITRFVAGLDRLVTSFDHTTELRIERVVLVHRVMA
                     IFMALLLVFTIIWLRVRLLQPWKQLLSMARAVSQRDFTQRANISGRNEMAALGSALNN
                     MSEELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSQAPLCERLSPVLNGLQ
                     NLTQLHDIELRVYDLEDEDNHQEFTCQSDISCDDKGCHLCPRSALPMINGGTTLKWRL
                     TDSHTQYGILLATLPYGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQRLIVMEERA
                     TIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNCSWAQLRELLT
                     TFRLQLTEPGLRPALEASCQEFSARFGFTVKLDYQLPPRLVPSHQAIHLLQIAREAPS
                     NALKHSHADDVVVTVTQCGKQVKLKVQDNGCGVPENAERSNHYGMIIMRDRAQSLRGD
                     CQVRRRETGGTEVTVTFIPETNFTETQGDTHE"
     gene            5629..6279
                     /gene="narL"
                     /locus_tag="MOX77_003619"
     CDS             5629..6279
                     /gene="narL"
                     /locus_tag="MOX77_003619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator NarL"
                     /protein_id="HCA3359042.1"
                     /translation="MNNQEPATILLIDDHPMLRTGVKQLVSMAPDISVVGEASNGEQG
                     IDLAESLDPDLILLDLNMPGMNGLETLDKLREKALSGRIVVFSVSNHEEDVVTALKRG
                     ADGYLLKDIEPEDLLKALQQAAAGEMVLSEALTPVLAASLRANRATTDRDVTQLTPRE
                     RDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWMHQERIF"
     gene            complement(6289..7704)
                     /locus_tag="MOX77_003620"
     CDS             complement(6289..7704)
                     /locus_tag="MOX77_003620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460724.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YchO/YchP family invasin"
                     /protein_id="HCA3359043.1"
                     /translation="MPFLLSFVVEVADTLSRIVFRSFSLSLLLLAASGTIRAQAQDPF
                     DQNRLPDLGMMPESHEGEKHFAEMAKAFSEASMKNNDLDTGEQARQFAFGQVRDVVSE
                     QVNQQLESWLSAWGSASVDINVDNEGHFNGSRGSWFIPLQDKQRYLTWSQLGLTQQTD
                     GLVSNVGIGQRWAQDGWLLGYNTFYDNLLDENLQRAGFGAEAWGEYLRLSANYYQPFA
                     DWQTHTATLEQRMARGYDINAQVRLPFYQHINTSVSLEQYFGDSVDLFDSGTGYHNPV
                     ALKLGLNYTPVPLLTMTAQHKQGESGVSQNNLGLTLNYRFGVPLKKQLAASEVAQSQS
                     LRGSRYDTPQRNSLPTMEYRQRKTLTVFLATPPWDLTPGETVALKLQVRSVHGIRHLS
                     WQGDTQALSLTAGTDTRSTEGWTIIMPAWDHREGAANRWRLSVVVEDEKGQRVSSNEI
                     TLALTEPFITMPDDNPHWQPF"
     gene            7881..8234
                     /locus_tag="MOX77_003621"
     CDS             7881..8234
                     /locus_tag="MOX77_003621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsrE/DsrF/TusD sulfur relay family protein"
                     /protein_id="HCA3359044.1"
                     /translation="MQNIVIIANGAAYGSESLFNSLRLAIALREQESHLDLRLFLMSD
                     AVTAGLRGQKPAEGYNIQQMLEILTAQNVPVKLCKTCADGRGITPLPLIDGVEIGTLV
                     ELAQWTLAADKVLTF"
     gene            complement(8314..8544)
                     /gene="chaB"
                     /locus_tag="MOX77_003622"
     CDS             complement(8314..8544)
                     /gene="chaB"
                     /locus_tag="MOX77_003622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative cation transport regulator ChaB"
                     /protein_id="HCA3359045.1"
                     /translation="MPYKAKSDLPDNVRNVLPAHAQDIYKEAFNSAWEQYKDKADRRD
                     DASREETAHKVAWAAVKNDYEKGEDDKWHKKK"
     gene            8811..9911
                     /gene="chaA"
                     /locus_tag="MOX77_003623"
     CDS             8811..9911
                     /gene="chaA"
                     /locus_tag="MOX77_003623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-potassium/proton antiporter ChaA"
                     /protein_id="HCA3359046.1"
                     /translation="MTHACEAVKTRHKETSLIFPVLALVVLFLWGSSQSLPVVIGINI
                     LALIGILSSAFSVVRHADVLAHRLGEPYGSLILSLSVVILEVSLISALMATGDAAPTL
                     MRDTLYSIIMIVTGGLVGFSLLLGGRKFATQYMNLFGIKQYLIALFPLAIIVLVFPMA
                     LPQANFSTGQALLVALISAAMYGVFLLIQTKTHQSLFIYEHEDEGDDDNPHHGKPSAH
                     SSGWHTVWLLIHLIAVIAVTKMNASPLEALLTSMNAPVAFTGFLVALLILSPEGLGAL
                     KAVLNNQVQRAMNLFFGSVLATISLTVPVVTLIAWATGNDLVFGLGAPEMVVMVASLV
                     LCHISFSTGRTNVLNGAAYLALFAAYLMTIFA"
BASE COUNT         2404 a         2627 c         2554 g         2327 t
ORIGIN      
        1 ccgctctgac caacgcaacc acagaacacc aacatattga tcagcccgcg atagttcata
       61 tcgaggtgat accagtggtt cagaccggcg ccaacgataa tcattgaacg cccgtgcgtt
      121 ttgtccgcgt tatcggcgaa ttcccgtgcg atacggatga tctgcgcccg cggcacgccg
      181 gtgatctgct cggcccatgc tggcgtatat gctttggtat catcataact ggcggcacaa
      241 ttttcatcgt tcaggccgcg ttccagacca tagttcgcca tggtcagatc gtaaacggta
      301 gtgactaacg ctgaagaacc atcggccagt tgcagacgtt ttgccggcag tttatgcagc
      361 aggacgttat ccagcgccac atgattaaag tactctgaac cctcgccgcc gaaatacggg
      421 aagcccacgt cagcaatctc atcctggctg cccagcaagc tgagctgcaa ttcagtttct
      481 gcaccggtag tcccgtcgcg ctgttcgagg ttccatttgc ctttttcgcc ccagcggaaa
      541 ccaattgaac cgtttggcgc caccatttca ccgttgctgt tgatagcgac ggttttccat
      601 tccgggttat tttcctgccc cagcgaatca acgagatcgg cagcgcgcag catacgacct
      661 gcggcataat aaccatcacg ctcttcaagc atcaccagca ttggcatgtc ggtatagcga
      721 cggacataat cggtgaagta ctggcgcggg ttgtcgaggt ggaactcgcg cagcatgacg
      781 tggcccatcg ccagcgccat cgccgcatcg gtcccctgct tcggcgccag ccacagatcg
      841 cacagtttgg cgatttcggc atagtccggc gtcaccgcga cggttttagt gcctttgtaa
      901 cgtacttcgg taaagaagtg ggcatccggc gtacgggttt gcggcacgtt agagccccag
      961 gcgataatat agctggagtt gtaccagtca gcggattccg gcacgtcggt ctgctcgccc
     1021 caggtttgcg gggaggctgg cggcaggtcg cagtaccagt cgtagaagct caggcaggta
     1081 ccgccaatca gcgaaagata acgtgcgccg gaagcgtagg aaaccatcga catcgccgga
     1141 atgggtgaga agcccgcgac gcggtcaggg ccataggttt tcacggtgta cacgttggaa
     1201 gcggcgatca gctcgttcac ttcctgccat gaggagcgaa caaagccgcc acgaccacgc
     1261 gcctgtttga agcttttggc tttatcggca tcttcaatga tggaggccca tgcctctacc
     1321 ggatcgcgat gcagtttttt cgcctcgcgc cacatcttca tcagacgttt gcgcattagc
     1381 ggatatttca gtcggttagc gctgtagaga taccaggagt aacttgcccc gcgcgggcag
     1441 ccgcgaggtt catggtttgg catatcagga cgggtgcgcg ggtaatcggt ttgctgtgtt
     1501 tcccaggtca ccagaccatt tttgacataa attttccagc tacaagaacc ggtgcagttc
     1561 accccatggg ttgagcgcac aattttgtca tgctgccaac gttggcggta tccgtcctcc
     1621 cagtcccggt ttgtttcgag aagctggccg tgcccatcgg caaaggtttc gcccttctgc
     1681 ttgaagtagc gaaaccggtc caggaattta ctcatcgggt ttctcctgtg tggaacctta
     1741 cggctctctg ataaatcgac attgcttaac taagggcgaa ggtaacgcgc tgaatgggcg
     1801 tgagaattga taacgatcaa ggcggacagg gatgcaaatg gcgcgcaaac ctccggcata
     1861 ctccttttgg aggaggagtt ttatttatat atattactga tttaattaca taaaattaaa
     1921 tttacgcacg acatgaatgt taaattttca acaagtgggt attaaggggt atccccctgg
     1981 atgaccgata aaaatgtgcg tggtcagccc tgtcgcgcct ctcttcttga ctataagtat
     2041 gttgtaacta aatgcgggta aaaaaaagcg cggtctaacg ccgcgcaaag gataatcaaa
     2101 agttactttt tatttttaga atgacgtcca tataccgccc aggtaataac gacgcaggcg
     2161 atatagaaaa taagaaagac tttcatcgcg ccgactggcg aaccggttaa tgctaaagat
     2221 gaaccaaacg ctttcggaat aaaaaagccg ccaatcgcgc caatcgcgga aataaagccc
     2281 agcgccgccg ccgtatcggt cgccgcttca cgcatggctc tttcgtccga cccgccttcc
     2341 gcttttaccc ggtccatcgt cagtttacgg aagataacgg agatcatctg gaaggtagaa
     2401 ccactcccca gccccgccgt caggaatagc gccagaaata ccccgtagaa tgcgataaag
     2461 ctaccgccaa cgccgccagt aggtaatgtc aggaacagca gaccgctgaa aatcgccatc
     2521 aggacaaagt tgataagcgt gacgcgagtc ccccccagac ggtcagaaat tgcgccgcct
     2581 gccgaacgcg ccagcgcgcc gataaacgga ccgaaaaacg cataatgcag gatctgcaca
     2641 tccgggaatt gcgttttaga cagcatagcg aaccccgcgg agaaaccgat aaacgatccg
     2701 aaggtcgcca gatacagcag actcatgatc cacagatgac cacgtttgag caccggcagt
     2761 tgctctttta gcgaggcctt agacgtcgcc agttcgttca tgccgaacca cgctgccagc
     2821 gtaaaaatgg ccaggaaagg cacccaaatc caggctgcgt tcgccagata gagctgagaa
     2881 ccgtccggct gctctacacc gtggctgcca aaggcggcaa agatagagag cgaaaccacc
     2941 agcggcgcaa ccagctgcat cacgctcacg cccatattgc ccagaccgcc gttcagaccc
     3001 agcgcgccgc cctgcttttg tttaggaaag aaaaagctga tgttcgccat actggaggca
     3061 aagttcgcgc cggcaaaacc acacagcaag gaaataataa tgaaagtgct aaatggcgta
     3121 ctggtatcct gaacggcaaa gcctaaccat acgcaaggca cgatgaggat accggtactg
     3181 aacgctgtcc agcgacgtcc gccaaatagc ggcaccataa aggagtaagg cacccgtagc
     3241 agcgcgccgg aaacagatgg cagcgcagtc aacataaaga gctgatcggt cgtaaaatta
     3301 aatcccactt tcggcaggtt caccgccact gcgctgaata gcatccagac gcaaaacgcc
     3361 agcagtaaac acgggacaga aatccacaaa ttacggctag cgacacgatg gccgcgctgc
     3421 tgccagaacg ccggatcttc cggacgccat tccgtgataa cagcgccagt tgccctttcc
     3481 ggggcggatg agtgactcat agacacctct gattcttgat ttgatgtctg ccacattagg
     3541 gtttactgcc gaaggtaagt tgatataaat caaaggaaaa gtcgtcatca ccggcgacta
     3601 aaaatagtta ttacccttaa tgagtaggct attttggtaa aaaagctgtg gtttttcacc
     3661 atgctgtgtc tgtctactcc ttcccgtcgc agatacctct ttacggcggc aattaaggag
     3721 taactcgtta taggtatggg tatactccgc tgtatcgttg agaatagcgg cacagccgat
     3781 tgacgccccc ttttttgcta cgttttttcg gcgacattac cccgaagaaa gaaggtaaca
     3841 tgtttaaacg gtgtttctct cctcttacgc tggttaacca actggcgctg attgtcatgc
     3901 tctctaccgc tatcggcgtg gcggggatgg cggtttccgg ctggctggtt cagggcgtgc
     3961 agggtagcgc tcatgcgatt aataaagcgg gctcattgcg tatgcaaagc tatcgactac
     4021 tggccgctgt cccgctggat gctaaagatc aaaagctgct ggatgagatg gagcaaacgg
     4081 cattcagccc tgaactgacc cgcgccgctg agcgagacgg gcagcagaag cagcttaaag
     4141 cgttgcagga ttactggcat aacgaactct cgccaaggct acagcacgcg caaaacgcgc
     4201 acgcggtcgc agaagatatc acgcgctttg tggcgggcct ggatcgcctg gtgacgtcgt
     4261 tcgaccatac gactgaattg cgtatcgaac gagtggtatt agttcaccgg gtaatggcga
     4321 tctttatggc gctattgctg gtatttacga ttatctggct acgtgttcgc cttttgcagc
     4381 cctggaaaca gttgttatca atggcgcgcg ccgtcagtca gcgcgacttt acccaacgtg
     4441 ccaatatcag tggacgcaat gagatggccg cgttgggttc tgcgctcaat aatatgtctg
     4501 aagaactggc cgaaagttat gcagtactgg aacagcgagt acaggaaaaa acagccggtc
     4561 tggaacataa aaaccagatt ctctcgtttt tgtggcaagc caaccgccga ctgcattcac
     4621 aggctccgct atgtgaacgt ctttcaccgg tactgaatgg cctgcaaaat ttaacccagt
     4681 tgcatgatat tgagctgcga gtctatgacc tggaagatga agataatcac caggaattta
     4741 cctgtcagtc ggacatcagt tgcgatgata aaggctgcca cctttgccca cgtagcgccc
     4801 tgccgatgat taacggcggc accaccttaa aatggcggct caccgactct cacacccaat
     4861 acggtatttt gctggcgacg ctgccctatg gacgccatct cagccacgat cagcaacagt
     4921 tggtggacac gctggttgaa cagcttaccg cgactctggc gctcgacagg catcaggagc
     4981 gccagcagcg gttgattgtc atggaagagc gtgccaccat tgcccgcgaa ctgcatgatt
     5041 ctattgccca gtcgctctct tgtatgaaga tgcaggtgag ctgcctgcaa atgcagggcg
     5101 acgcgttacc ggaaagcagc cgtgagttac tcagccaaat tcgcaatgag ctgaactgct
     5161 cctgggcgca actgcgcgaa ctgttaacca ctttccgctt acagttgacg gaacccgggc
     5221 tacgtccggc gctggaggca agctgccagg agttcagcgc ccggtttggc tttacggtaa
     5281 aactggatta tcagcttccc ccccgcctgg tgccatcaca ccaggcgata cacctgttgc
     5341 aaattgccag ggaagccccc agcaacgccc ttaaacactc tcatgccgac gatgtggtgg
     5401 tgacagtgac gcaatgtggc aaacaggtca aactaaaagt gcaggacaat ggctgcggcg
     5461 tcccggaaaa cgccgaacgc agtaatcact acggcatgat catcatgcgc gatcgggcgc
     5521 aaagtttgcg cggcgattgc caggtacgcc gacgcgagac tggcggaaca gaggtcactg
     5581 ttacttttat tccagaaaca aacttcacag aaacccaggg agatacccat gaataatcag
     5641 gaaccggcaa ccatcctgtt aatcgatgac catccgatgc tacgcacggg tgtaaagcag
     5701 cttgtgagta tggcgcccga tatcagcgtg gtcggagaag ccagcaacgg tgagcagggt
     5761 attgacctgg cggaatcgct cgatcccgat ctgatcctcc ttgatttgaa tatgccggga
     5821 atgaatggtc tcgaaacgct ggataaatta cgcgaaaaag cgctgtcagg acgtattgtc
     5881 gttttcagcg tatccaacca tgaagaagat gtcgtcacgg cgctaaagcg cggcgcggat
     5941 ggttatctgt tgaaagacat agagccggag gacttgctca aagcgttaca acaggccgcc
     6001 gccggcgaaa tggtattaag tgaagcgtta acgccggtac tggcggccag cctgcgggcc
     6061 aaccgcgcta ccaccgatcg cgatgtgacg caactcaccc cgcgtgagcg cgatattctg
     6121 aagctcatcg cgcagggatt gccaaataag atgattgccc ggcgtctgga tatcaccgaa
     6181 agtacggtca aagtgcacgt gaaacatatg ctcaagaaaa tgaagctgaa atcgcgcgtg
     6241 gaggccgccg tctggatgca tcaggaacgc atcttttaat tattgctcct agaacggttg
     6301 ccaatgcgga ttatcgtccg gcatcgtgat aaacggttca gtcagcgcga gcgtgatctc
     6361 attggaagag acacgctgac ctttttcatc ctcaaccacc accgataaac gccagcgatt
     6421 tgccgcgcct tcgcggtgat cccaggccgg cataatgatt gtccagccct cggtactgcg
     6481 ggtgtccgtt cctgccgtca aacttaatgc ctgtgtatcg ccctgccagc tcaaatgacg
     6541 aataccgtgc acgctgcgca cctgcaattt taacgcaacc gtctcaccag gcgtaagatc
     6601 ccagggcggc gtcgccagaa aaaccgttaa cgttttacgc tgccgatact ccattgtcgg
     6661 cagcgagtta cgttgcggcg tatcatagcg gctaccgcgt aatgactggc tttgcgccac
     6721 ttcactggcg gcaagctgct ttttgagcgg cacgccgaag cggtagttaa gcgtcagccc
     6781 caggttattc tgactgaccc cgctctcgcc ctgtttgtgc tgggcggtca tagtaagcaa
     6841 aggtactggc gtatagttga gacccagttt taacgcgaca ggattgtgat accccgttcc
     6901 ggagtcaaac agatccacgc tatcgccaaa gtactgctcc agactaacgc tggtattgat
     6961 atgctggtaa aacggcagcc gcacttgcgc gttgatatca tatccgcgcg ccattcgctg
     7021 ttctaaggtc gccgtatgcg tctgccagtc ggcaaaaggc tgataatagt tggcggataa
     7081 acgcaaatat tctccccacg cctccgcgcc aaagccggcg cgctgcagat tttcatccag
     7141 cagattatcg taaaaggtat tatagccaag aagccagcca tcctgcgccc agcgctgtcc
     7201 tatgccaacg ttgcttacca gtccgtcagt ctgttgcgta agaccaagct ggctccaggt
     7261 cagatagcgc tgtttatcct gtaaagggat aaaccagctt ccgcgactgc cgttaaaatg
     7321 accttcgtta tcgacgttaa tatccacgct ggcgctgccc caggctgata gccagctttc
     7381 aagctgctgg ttaacctgct cgctgaccac atcgcgtacc tgtccgaaag cgaattgccg
     7441 cgcctgttca ccggtatcca gatcgttatt tttcatgctg gcttcgctaa acgctttggc
     7501 catctcggca aaatgctttt ccccttcgtg ggattccggc atcatgccta aatccggcag
     7561 acggttttga tcgaaagggt cttgcgcctg cgcacggatc gtaccgctgg cagccagcaa
     7621 gagaagcgag agtgagaatg aacgaaaaac aatacggctc aacgtgtcgg caacttctac
     7681 aacaaaagat aagaggaatg gcatcagagt aaaccataac gtgtccggac aggttttgca
     7741 gccttttctc gtgtttccag gaatatcctt attttttccg cagagcgtcc cgggattttc
     7801 tccacgcatt tggcggtacc cggttcccga ggtaacataa cgccattgcc gacaaaattt
     7861 ctcaaggaga agggttatcc atgcaaaata tcgtcattat cgctaacggc gccgcctacg
     7921 gcagcgaatc attatttaat agcctgcgtc tggccattgc gcttcgcgag caggaaagcc
     7981 atctcgattt acgcctgttt ttgatgtcag atgccgtaac cgcagggtta cgcggtcaaa
     8041 aaccagccga aggctacaat attcagcaaa tgctggaaat tctaaccgcg caaaacgtac
     8101 cggtaaaatt atgcaaaacc tgtgcggacg gacgtggtat cactcccctg ccgctgattg
     8161 acggtgtgga aatcggaacg ctggtcgagc tggcgcaatg gacgctggcg gcggacaaag
     8221 tgctgacatt ttgaatctgt acgcgggaaa agctcccgcg tcaggataga cttccggcaa
     8281 gaaaatcagg ctaacgcgtg agtaataccg cgtttatttt ttcttatgcc atttatcatc
     8341 ctcgcctttt tcataatcgt ttttaaccgc cgcccaagcg actttgtgtg cggtttcctc
     8401 gcgactggcg tcatcacgac gatcggcttt atctttatat tgctcccagg cgctattaaa
     8461 cgcttctttg taaatgtcct gggcatgggc tggaagaaca ttccgcacat tatcgggtaa
     8521 atcacttttg gctttatacg gcatcagcgc ctccgtcttc agggaaaaca ttaagtgtgg
     8581 taaacaatgc gttattacgc cagtcgagga ggatttttgc tttttacgga aattaacttt
     8641 ttgttattta aacactgtta aaacaagata cttgttttac tgaccttgaa agaaaaaaat
     8701 cgtctacgcc gtaaaactac gtaaaaaacc actaaaaaaa tacaaatttc tgctattttt
     8761 accttcttta ctctttccaa aatattaaca cctgcacaag ggagacccac atgacacatg
     8821 cctgtgaggc ggtgaaaacc cgccataagg agacttcgct tattttcccg gttcttgcgc
     8881 tggtagtgct gttcctttgg ggaagtagcc agtcactacc agtggttatt ggcatcaata
     8941 tccttgcact tattggtatt ttaagcagcg catttagcgt ggtccgtcat gccgatgtat
     9001 tagcgcaccg actcggcgaa ccctacggat cgcttatttt aagcctgtcc gtcgttattc
     9061 ttgaggtgag tttaatttcc gcgctgatgg ctaccggcga tgctgcgcca acgcttatgc
     9121 gcgatacgct ctactctatt attatgattg tcaccggggg actggtcggt ttttcgttgt
     9181 tgttgggcgg gcgtaaattc gcaacgcaat atatgaattt atttgggatt aagcagtatc
     9241 ttatcgcgct atttccgctg gcgattattg tgctggtttt tcccatggca ttgccgcaag
     9301 ccaatttttc tactggtcag gcattattgg tcgcgttaat ttccgccgcg atgtacggcg
     9361 tatttttgtt gattcaaacc aaaacgcacc agagcttatt tatctatgaa catgaagatg
     9421 aaggcgatga tgacaatcca caccacggta aaccctccgc gcacagtagc ggctggcata
     9481 cggtctggtt actcattcat ttaattgcgg tcattgccgt taccaaaatg aatgccagcc
     9541 cgctggaggc gttgctgacc agcatgaacg ctccggtcgc ctttaccggt ttcctggtcg
     9601 cgctgttaat tctctcgccg gaaggactgg gcgcgctgaa ggcggtactg aataatcagg
     9661 ttcagcgggc aatgaatctg ttcttcggat cggtgttggc gacgatttca ttaaccgtgc
     9721 cggtcgtcac gctcatcgca tgggcgacag gtaatgatct ggtgtttggt ttaggcgcgc
     9781 cggaaatggt agtgatggtg gcctcgttag tgctgtgcca tatttcgttc tctaccggac
     9841 gcaccaacgt gctaaacggc gcggcgtatc tggctttatt tgccgcctat ctgatgacga
     9901 tttttgcctg at
//
LOCUS       DAGWFR010000150         9888 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.152, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000150 DAGWFR010000000
VERSION     DAGWFR010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 9888)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9888)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9888
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.152"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..243)
                     /locus_tag="MOX77_003624"
     CDS             complement(<1..243)
                     /locus_tag="MOX77_003624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5609 domain-containing protein"
                     /protein_id="HCA3359047.1"
                     /translation="MPNITWCDLPEDVSLWPGLPLSLSGDEVMPLDYHAGRSGWLLYG
                     RGLDKQRLTQYQTKLGAAMVIVAAWCVEDYQVIRLAG"
     gene            360..1004
                     /locus_tag="MOX77_003625"
     CDS             360..1004
                     /locus_tag="MOX77_003625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463433.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtjB family periplasmic protein"
                     /protein_id="HCA3359048.1"
                     /translation="MARAKLKFRLHRAVIVLFCLTLLVALMQGASWFSQNHQRQRNPQ
                     LEELARTLARQVTLNIAPLMRSETPDENRINAVLRQLTQESRILDAGVYDEQGDLITR
                     AGESVNVRDRLALDGKKAGSYFNQQIVEPIQGKNGPLGYLRLTLDTHTLATEAKQVDN
                     TTNILRLMLLLSLAIGVVLTRTLLQGKRTRWQQSPFLLTASKPVPEEEEREEKE"
     gene            1038..2054
                     /gene="lplA"
                     /locus_tag="MOX77_003626"
     CDS             1038..2054
                     /gene="lplA"
                     /locus_tag="MOX77_003626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoate--protein ligase LplA"
                     /protein_id="HCA3359049.1"
                     /translation="MTTLRLLISDSYDPWFNLAVEECIFRQMPATQRVLFLWRNADTV
                     VIGRAQNPWKECNTRRMEEDNVRLARRSSGGGAVFHDLGNTCFTFMAGKPEYDKTIST
                     HIVLAALNSLGVMADASGRNDLVVKTPDGDRKVSGSAYRETKDRGFHHGTLLLNADLS
                     RLANYLNPDKKKLAAKGITSVRSRVANLTELLPGITHEQVCQAVTEAFFAHYGERIDA
                     EVISPDKTPDLPNFTETFARQSSWEWNFGQAPAFSHLLDERFTWGGVELHFDVEKGVI
                     TRAQAFTDSLNPAPLEALAGRLQGCQYRADKLQETCEALIATFPEQESELRELANWVA
                     GAVR"
     gene            complement(2145..2630)
                     /locus_tag="MOX77_003627"
     CDS             complement(2145..2630)
                     /locus_tag="MOX77_003627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000006255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HCA3359050.1"
                     /translation="MSNYRRYYINGGTWFFTVNLKNRKSDLLVRQIAELRSAIRRVKN
                     TKPFQIDAFVVLPEHLHCIWTLPENDCDFSSRWRELKKLFTKSIMRHDVWQPRFWEHT
                     IRDEKDFRRHVDYLYFNPVKHGWVRRVQDWPFSTFHRDVRNGVYPVDWAGEVRDLDAG
                     E"
     gene            complement(2837..3556)
                     /gene="deoD"
                     /locus_tag="MOX77_003628"
     CDS             complement(2837..3556)
                     /gene="deoD"
                     /locus_tag="MOX77_003628"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HCA3359051.1"
                     /translation="MATPHINAEMGDFADVVLMPGDPLRAKHIAETFLEDVREVNNVR
                     GMLGFTGTYKGRKISVMGHGMGIPSCSIYTKELITDFGVKKIIRVGSCGAVRMDVKLR
                     DVVIGMGACTDSKVNRIRFKDHDFAAIADFDMVRNAVDAAKALGVDARVGNLFSADLF
                     YSPDGEMFDVMEKYGVLGVEMEAAGIYGVAAEFGAKALTICTVSDHIRTHEQTTAAER
                     QTTFNDMIKIALESVLLGDKE"
     gene            complement(3766..4989)
                     /gene="deoB"
                     /locus_tag="MOX77_003629"
     CDS             complement(3766..4989)
                     /gene="deoB"
                     /locus_tag="MOX77_003629"
                     /EC_number="5.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopentomutase"
                     /protein_id="HCA3359052.1"
                     /translation="MKRAFIMVLDSFGIGATEDADRFGDVGSDTLGHIAEACAKGEAD
                     NGRKGPLNLPNLTRLGLVKAHEGSTGKIAAGMDGNADVIGAYAWAHELSSGKDTPSGH
                     WEIAGVPVLFDWGYFSDHENSFPQELLDKLVKRANLPGYLGNCHSSGTVILDQLGEEH
                     MKTGKPIFYTSADSVFQIACHEETFGLDKLYELCEIAREELTEGGYNIGRVIARPFIG
                     DKAGNFQRTGNRHDLAVEPPAPTVLQKLVDEKQGHVVSVGKIADIYANCGITKKVKAT
                     GLDALFDATLKEMKEAGDKTIVFTNFVDFDSSWGHRRDIAGYAAGLELFDRRLPELME
                     LVGEDDILILTADHGCDPSWTGTDHTREHIPVLIYGPKVKPGSLGHRETFADIGQTLA
                     TYFGTSPMDYGKNML"
     gene            complement(5041..6363)
                     /gene="deoA"
                     /locus_tag="MOX77_003630"
     CDS             complement(5041..6363)
                     /gene="deoA"
                     /locus_tag="MOX77_003630"
                     /EC_number="2.4.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine phosphorylase"
                     /protein_id="HCA3359053.1"
                     /translation="MFLAQEIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAM
                     TIFFHDMTMPERVSLTMAMRDSGTVLDWKSLNLNGPIVDKHSTGGVGDVTSLMLGPMV
                     AACGGYVPMISGRGLGHTGGTLDKLEAIPGFDIFPDDNRFREIIQDVGVAIIGQTSSL
                     APADKRFYATRDITATVDSIPLITGSILAKKLAEGLDALVMDVKVGSGAFMPTYELSE
                     ALAEAIVGVANGAGVRTTALLTDMNQVLASSAGNAVEVREAVQFLTGEYRNPRLFDVT
                     MALCVEMLISGQLAKDDAEARAKLQAVLDNGKAAEVFGRMVAAQKGPSDFVENYDKYL
                     PTAMLSKAVYADTEGFISAMDTRALGMAVVSMGGGRRQASDTIDYSVGFTDMARLGDS
                     IDGQRPLAVIHAKDEASWQEAAKAVKAAIILDDKAPASTPSVYRRITE"
     gene            complement(6486..7265)
                     /gene="deoC"
                     /locus_tag="MOX77_003631"
     CDS             complement(6486..7265)
                     /gene="deoC"
                     /locus_tag="MOX77_003631"
                     /EC_number="4.1.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005097947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribose-phosphate aldolase"
                     /protein_id="HCA3359054.1"
                     /translation="MTDLKASSLRALKLMDLTTLNDDDTNEKVIALCHQAKTPVGNTA
                     AICIYPRFIPIARKTLKEQGTPDIRIATVTNFPHGNDDIDIALAETRAAIAYGADEVD
                     VVFPYRALIAGNEQVGFDLVKACKDACAAANVLLKVIIETGELKEEALIRKASEISIK
                     AGADFIKTSTGKVPVNATPESARIMMEVIRDMGVSKTVGFKPAGGVRTAEDAQKFLAI
                     ADELFGANWADSRHYRFGASSLLASLLKALGHGDGKSASSY"
     gene            7525..9075
                     /locus_tag="MOX77_003632"
     CDS             7525..9075
                     /locus_tag="MOX77_003632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjjI family glycine radical enzyme"
                     /protein_id="HCA3359055.1"
                     /translation="MPASCETALQQRCQQIVTSPVLTPEQKRHFLALEAENALPYPTL
                     PEDARQALDEGVICDMFEGHAPFKPRYVLPDYARFLANGSQWLELEGAKDLDDALSLL
                     TILYHHVPSVTSMPVYLGQLDALLQPYVRILTQDAIDIRIKRFWRYLDRTLPDAFMHA
                     NIGPADTPVTRAILRADAELKQVAPNLTFIYDAEITPDDLLLEVAKNICECSKPHISN
                     GPVNDKIFTKGHYGIVSCYNSLPLAGGGSTLVRLNLKAVAERSTSVDDFFSRTLPHYC
                     RQQIAIINSRCEFLYEKSHFFENSFLVQEGLIDPERFAPMFGMYGLAEAVNLLCENAG
                     LTARYGKNETANELGYRISAQLADFVENTPVKYGRKQRALLHAQSGISSDIGTTPGAR
                     LPYGDEPDPITHLQTVAPHHAFYHAGISDILTLDETIKRNPQALVQLCLGAFKAGMRE
                     FTANVSGNDLVRVTGYMVRLSDLAKFRAEGSRTNTTWLGEEAARNTRILERQPRVVSH
                     EQQMRFSQ"
     gene            9047..>9888
                     /locus_tag="MOX77_003633"
     CDS             9047..>9888
                     /locus_tag="MOX77_003633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjjW family glycine radical enzyme activase"
                     /protein_id="HCA3359056.1"
                     /translation="MNNRCALVSKIIAFSCVDGPGSRLALFLQGCNLRCKNCHNPWTM
                     GRCNDCGECVSQCPHHALSIDGGKVVWRSDVCEQCDTCLKMCPQQATPMAQTMSIDDV
                     LRHIRKASLFIEGITVSGGEATTQLPFIVALFTALKADPQLQRLTCLVDSNGQLSETG
                     WQKLLPVCDGVMLDLKAWKSECHHRLTGRDNTHIKHSIRFLAARGKLAELRLLVIPGQ
                     VDYAAHIDSLAAFITSLGEVPVRLNAFHAHGVYGEAKAWPGATPQEVERLADGLRARG
                     VAKL"
BASE COUNT         2286 a         2780 c         2633 g         2189 t
ORIGIN      
        1 ccccgccaga cgaatgacct gataatcctc cacgcaccag gcggcgacaa tcaccattgc
       61 cgcgcccagt ttggtctgat attgagttaa acgctgctta tccagcccgc gcccatacag
      121 cagccaaccg ctgcggcctg catggtaatc cagaggcatc acctcgtcgc cgcttaaaga
      181 aagaggcaaa ccaggccata aagagacatc ttcaggcaga tcgcaccagg taatgttagg
      241 cattaaagct cctgtaaatc gttcaggccg gtaaccgccc cgcggaaaat aacgcatgag
      301 gctaccttgt aaccatcgct tctggcaaca ttaagcctca aattttcagc aggtggaata
      361 tggctcgcgc aaaactgaaa tttcggctgc atcgtgcagt cattgtattg ttctgtctca
      421 cactgctcgt cgcgctcatg cagggcgcgt cctggtttag tcaaaaccac cagcgacagc
      481 gcaatccaca gctggaagag ctggcccgca cgctggcgcg ccaggtgacg ctcaacatcg
      541 ccccgctgat gcgcagcgaa acaccggatg aaaatcgcat caacgccgtg ctgcgtcagc
      601 tcacgcaaga gagccgtatt ctggatgccg gcgtctatga tgaacagggc gatcttatta
      661 ctcgcgctgg cgaaagcgtc aacgtgcgcg acaggctggc gctggatggc aaaaaagcgg
      721 gcagctattt taaccaacaa attgtcgagc ctatccaggg gaaaaacggc ccattgggct
      781 acctgcgtct gacgctggat acccacactc tggccaccga agcaaaacag gtcgataaca
      841 ccaccaacat tctacgcctg atgctgctac tctcgctggc gataggcgtg gtgctgacgc
      901 gcaccttgct acaaggtaaa cgcacccgct ggcagcagtc acccttcctg ttaacggcca
      961 gcaagcctgt tccggaagag gaagagcgtg aggaaaaaga gtaaaatgac ggcttaataa
     1021 aggtaaggaa aaccaccatg acaacattac gcctgcttat ttctgactct tacgatccct
     1081 ggtttaacct ggcggtcgag gagtgcattt tccgccagat gcccgccacc cagcgcgtgc
     1141 tgttcctgtg gcgcaacgcg gacacggtgg tcattggacg cgcgcaaaac ccgtggaaag
     1201 agtgtaatac gcggcgtatg gaagaagata acgtccgtct ggcccgccgt agcagtggcg
     1261 gcggcgcggt attccatgac ctcggtaata cctgctttac ctttatggcc ggtaaaccgg
     1321 aatacgataa aaccatctcc acccatattg tgctcgcggc gctgaattcg ctgggcgtca
     1381 tggccgatgc ttcaggacgc aacgatctgg tcgtaaaaac gccggacggc gatcgcaaag
     1441 tctccggttc agcctatcgc gaaaccaaag atcgcggctt ccatcacggt acgctgctgc
     1501 tgaacgccga cctcagccgt ctggcaaact atctgaatcc ggataaaaag aaacttgcgg
     1561 cgaaaggaat cacctccgtt cgctcccgcg tagccaatct taccgagtta ttaccgggta
     1621 tcacccatga acaggtctgc caggcggtca cggaagcctt tttcgcccat tacggcgaac
     1681 gcatcgacgc ggaagtgatt tcaccggata aaacgccgga tctgccgaat tttaccgaaa
     1741 cctttgcgcg ccagagcagt tgggagtgga atttcggcca ggcaccggcg ttcagccatc
     1801 tgctggacga gcgtttcacc tggggcggcg tcgagctgca ttttgacgta gagaaaggtg
     1861 tgattactcg cgcacaggcg tttaccgata gcctgaaccc ggcaccgctg gaagcgctgg
     1921 cggggcggct gcaaggctgc cagtatcggg cggataaact acaggaaacg tgcgaagcgc
     1981 tgatagcgac gtttccggaa caggagagtg agttgcggga actggcgaat tgggtcgcag
     2041 gggccgtgcg ttaaagaatt gccggatggc ggctacgcct tatccggcct acaaatgagt
     2101 gctttctgta ggccggataa gcaacgcgcc atccggcatt accgctattc accagcgtca
     2161 agatccctca cctcccccgc ccaatcaacc gggtaaacgc cattgcgaac atcacgatga
     2221 aaggtcgaaa acggccaatc ctgcacccgc cttacccaac cgtgcttcac ggggttgaag
     2281 tagaggtaat cgacatgtcg gcgaaaatcc ttttcgtcgc gaatcgtgtg ctcccagaat
     2341 cgtggctgcc acacgtcatg gcgcattatc gatttggtaa ataacttttt aagctcccgc
     2401 cagcgagatg aaaagtcaca atcgttctca ggaagcgtcc agatgcaatg cagatgctca
     2461 ggcaacacga caaaagcatc aatttgaaaa ggcttcgtat ttttcactcg gcgaatcgca
     2521 gagcgtaatt ccgcaatctg gcggacaagt aaatcacttt tccggttttt cagattaacc
     2581 gtgaaaaacc aggttccacc gttaatgtaa taacgacgat agttcgacat tttgttcatt
     2641 ccttaaacaa aatccaaacg taacgggtta atagcaaaag gcaatgcgga gagggtaatt
     2701 cgggaatgag gctcgcagta taaacagcag attgccggat ggcggctacg ccttatccag
     2761 cctacaaatc gatcctgtaa caatcgcagg ccgttgtagg cccggtaagc gaagcgccac
     2821 cgggcacagc acaatcttac tctttatcgc ccagcagtac ggattccagc gcgattttga
     2881 tcatgtcgtt gaaggtcgtc tgacgttcag cggcagtggt ctgctcgtgg gtacggatat
     2941 ggtcagacac ggtgcagatg gtcagcgctt tcgcgccaaa ttcagccgca acgccgtaga
     3001 tacccgccgc ttccatctct acgcccagta cgccgtattt ttccatcacg tcgaacattt
     3061 cgccgtccgg agaatagaac agatccgcgg agaacaggtt gcccacgcgc gcgtctacgc
     3121 ccagcgcttt tgccgcgtca accgcgttac gtaccatgtc gaagtcagcg atagccgcaa
     3181 agtcatgatc tttgaaacgg atacggttca ctttggagtc ggtgcaggcc cccataccga
     3241 tcaccacgtc acgcagtttg acgtccatgc gcacagcgcc gcaggagccg acgcgaatga
     3301 ttttcttcac gccgaaatcg gtgatcagct ctttggtgta gatggagcag gacgggatac
     3361 ccataccgtg gcccatcacg gagatcttac ggcctttgta agtcccggtg aaacctaaca
     3421 tgccgcgaac gttgttcact tcgcggacat cttcgaggaa agtctcagca atgtgcttcg
     3481 cacgcagcgg gtcgcccggc atcaatacga cgtcagcgaa atcacccatt tctgcattaa
     3541 tatgtggagt tgccatcttc agttcccttt aaatttgttg ttattgcctg atggcggcta
     3601 cgccttatca ggcctacaaa acgtgtgtaa aaacagtgaa ataccctaag gatttcgcgt
     3661 tgtaggaagg cgacgaattc gtgaatcccc gggagcatag attaactatg tgaccggggt
     3721 gagcgaatga agtcaacgca tctacagcgc gaaagacaac gggtatcaca gcatgttttt
     3781 accgtagtcc atcggcgatg taccaaagta ggtcgccagc gtctggccga tatccgcaaa
     3841 ggtttcacgg tgacctaaag agcccggttt gactttcgga ccgtagatca gcaccggaat
     3901 gtgctcacgg gtatggtcag taccggtcca gctcgggtca cagccgtggt cagcggtcag
     3961 gatcagaatg tcatcttcac ccaccagctc catcagctcc ggcagacggc ggtcaaacag
     4021 ctccagacct gcggcgtagc ccgcgatgtc gcgacggtgg ccccaggaag agtcgaagtc
     4081 aacgaagtta gtgaaaacga tggttttatc gcccgcttct ttcatctctt tgagggtcgc
     4141 gtcgaacagc gcgtccagac cggtcgcttt cactttctta gtgatgccgc agttggcgta
     4201 gatgtcggca atcttaccga cggacaccac gtggccctgt ttttcatcga ccagtttctg
     4261 cagcacggtc ggcgctggcg gttctacggc caggtcgtga cggttgccgg tacgctggaa
     4321 gttaccggcc ttgtcgccga taaacggacg cgcgatcacg cggccaatgt tgtagccgcc
     4381 ttcggtcagc tcttcacggg cgatttcgca cagctcgtag agtttatcca ggccaaaggt
     4441 ctcttcgtgg caggcaatct ggaacacgga gtcagcggag gtgtaaaaaa tcggcttgcc
     4501 ggttttcatg tgctcttcgc cgagctggtc cagaatgacc gtaccggaag agtggcagtt
     4561 accgagatag cccggcaggt tggcgcgttt taccagctta tccagcagtt cctgcgggaa
     4621 gctgttttcg tggtcgctga aatagcccca gtcgaacagc accggcacgc cggcgatttc
     4681 ccagtggccg gacggcgtat ctttgccgga ggacagttcg tgcgcccatg cgtatgcgcc
     4741 aataacgtcc gcgttgccgt ccatgccggc ggcaatttta ccggtagagc cttcatgcgc
     4801 tttcaccagc cccagacgag tcaggttagg cagattcaac gggcccttac ggccattgtc
     4861 agcttcgcct ttggcgcaag cttctgcgat gtggcccaga gtgtcggaac ctacgtcgcc
     4921 aaaacgatcc gcgtcttcag tagcgccgat gccgaatgag tccagcacca taataaatgc
     4981 acgtttcata tcttctccgt acttagtgct tcaaaaataa ttgatcagat cagtatacaa
     5041 ctattcagta attcgacgat agaccgaagg tgtgcttgct ggcgctttat cgtcaaggat
     5101 aattgccgct ttgacggcct tcgccgcttc ctgccaactg gcttcgtctt tggcatgaat
     5161 caccgccagc gggcgctgcc cgtcgatgct gtcgcccaga cgggccatgt cggtaaagcc
     5221 aacgctgtaa tcaatggtat cagacgcctg acgacggccg ccgcccatcg agacgaccgc
     5281 catccccagc gcacgcgtat ccattgcgct gataaaccct tcggtatcag catataccgc
     5341 tttgctcaac atggcggtcg gcaggtattt atcgtagttc tcaacgaaat cgctcggccc
     5401 tttctgcgcg gccaccatac gaccaaagac ttctgccgct ttaccgttat ccagaaccgc
     5461 ctgtaatttc gcacgcgctt cggcgtcgtc tttcgccagc tggccggaga tcagcatctc
     5521 cacgcatagc gccatggtaa cgtcaaacaa gcgcggattg cggtattctc cggtcaggaa
     5581 ctgcacggct tcacgcactt ccaccgcgtt accggcgctc gaagccagca cctggttcat
     5641 atcggttaac aaagccgtag tgcgaactcc cgcgccgttt gccacgccaa caatcgcttc
     5701 agcaagggct tcagaaagtt cataggttgg cataaacgcg ccactgccga ctttgacgtc
     5761 cattaccagc gcatccagcc cttcggccag tttcttggcg aggatggaac cagtgatcag
     5821 cggaatagag tccaccgtcg cggtaatatc gcgggtggcg taaaaacgtt tgtccgccgg
     5881 tgcaagcgag ctggtttgcc caataatcgc cacacccacg tcttgaataa tttcgcggaa
     5941 acggttgtcg tccgggaaga tgtcgaagcc cgggatcgct tccagtttgt cgagcgtacc
     6001 gccggtatgt ccgagaccgc gaccggagat catcggcaca taaccgccgc aggccgctac
     6061 cattggcccc agcatcagag acgtcacgtc ccctacgccg ccggtcgaat gcttatcgac
     6121 aatcgggcca ttgagattca ggcttttcca gtcaaggaca gtaccggaat cccgcatcgc
     6181 catggtcagc gaaacacgct ccggcatggt catatcgtgg aagaagatgg tcatcgccag
     6241 ggcggcaatc tgcccttcag agatagtatt gtcacgaata ccattgataa agaaacgaat
     6301 ttcttcgtca ctcaacgcat gaccatcacg ctttttacga ataatttctt gtgcgagaaa
     6361 cacggtaccc tcctgaggga aaagagtaga aggcttacat cgccggatgg cggctaacgc
     6421 cttatccggc ctacaggcct ggatttgtag gccggaaagc gcagcgccat ccggcaaatc
     6481 agagcttagt agctgctggc gctcttaccg tcgccgtgac ccagcgcttt cagcaggctt
     6541 gccagcaggc tggatgcgcc aaagcggtag tgacgagaat ctgcccagtt agcgccaaac
     6601 agttcgtctg cgatcgcgag gaatttctgc gcgtcttccg ccgtacgtac gccgcccgcc
     6661 ggtttgaagc caacggtttt ggaaacgccc atgtcgcgga tcacttccat catgatgcgc
     6721 gcgctttccg gcgtagcgtt taccggcact ttaccggtag aggttttgat gaaatccgca
     6781 ccggctttaa tggagatttc agaggcttta cgaatcagcg cctcttcttt cagctcgccg
     6841 gtttcgataa tcactttcag caatacgttc gctgcggcac aagcgtcttt acaggctttt
     6901 accaggtcaa aacccacctg ctcgttaccg gcgatcaacg cgcggtacgg gaataccacg
     6961 tccacttcgt cagcgccgta ggcgatcgcc gcacgggttt ccgccagcgc aatatcgatg
     7021 tcatcattgc catgcgggaa gttagtcacc gttgcaatgc ggatgtccgg ggtaccttgt
     7081 tctttcagag ttttacgcgc aatcgggata aaacgcgggt aaatacaaat cgccgccgta
     7141 ttcccgaccg gggtttttgc ctgatgacac aacgcgatca ctttttcatt ggtgtcgtca
     7201 tcgttcagag tggtcagatc catcagtttg agcgcacgca ggctgcttgc ttttaaatca
     7261 gtcatgacat tctccaacgg cattgccgta taaaatttca ccttgcgagt ctgttaatat
     7321 tctaacattc actcgcgatt acacttcgat atacatcaca gttaatgaaa actacgtaca
     7381 aatttgcatt actgtaatga gatctgaatc aaattatccc gccgtcaccg cctgttcttc
     7441 gagcgttaag cgcatcagga tcaaagtcgg tttgccgcca ttttctacaa tagcgcatcg
     7501 tcccggcata aagaggaaac gaagatgcct gcctcatgcg aaactgcgct ccagcagcgt
     7561 tgccagcaaa ttgtgaccag cccggtgctc acgcctgaac aaaaacgcca ttttctggcg
     7621 ctggaagctg aaaacgccct gccttatccc accctgccgg aagatgcccg ccaggcgctg
     7681 gatgaaggcg tcatttgcga tatgtttgag gggcacgccc ccttcaaacc gcgctacgtg
     7741 ttgcccgatt acgcccgatt tctggctaac ggttcacagt ggctggaact ggaaggcgcg
     7801 aaagatctgg atgatgcgtt atccctactc accattctgt atcatcacgt tccttccgtg
     7861 acgtccatgc cggtttatct cggccagctt gatgcgttgc tgcaaccgta tgttagaatt
     7921 ctaacacaag atgcgatcga tattcgaata aaacgtttct ggcgttatct cgacagaacg
     7981 ctgccagacg cctttatgca tgccaatatt ggccctgccg atacgcctgt cacacgagcg
     8041 attttgcgcg ccgatgccga gttaaagcag gtggcgccta acctgacgtt tatctacgat
     8101 gcggaaatta cgccggacga tctgctgctg gaggtcgcca aaaacatttg cgaatgcagt
     8161 aagccacaca tttccaacgg ccctgtaaat gataaaattt tcacaaaagg ccattatggc
     8221 atcgtcagtt gttataactc gctaccgctt gccggcggtg gcagtacgct ggtacgtctc
     8281 aacctgaaag ccgtggcaga acgcagtacg tctgtcgatg acttcttttc acgcacgcta
     8341 ccgcactact gccgacagca gatcgccatc attaattcac gatgtgaatt cctctatgaa
     8401 aagtcacatt tctttgagaa tagcttcctt gtacaggaag gtttgatcga tcccgaacgt
     8461 tttgcgccga tgttcggtat gtacgggctg gcggaagccg tgaacctgct gtgcgaaaac
     8521 gccggcctga ccgcccgtta cggcaagaat gaaacggcga acgagctggg ctaccgtatt
     8581 agcgcccaac tggcggattt cgtcgaaaat acgccagtga agtatggcag gaagcaacgg
     8641 gcgctgctcc atgcccagtc tggcatcagt tccgatatcg gcactacgcc gggcgcgcgt
     8701 ctgccgtatg gcgatgaacc ggaccctatc acccatttgc aaaccgtcgc gccgcaccat
     8761 gccttttatc atgccgggat cagcgacatt ctgacgctgg acgaaaccat caagcgcaat
     8821 ccgcaggcgc tggttcagct ttgtcttggc gcgttcaaag ccgggatgcg ggaatttacc
     8881 gccaatgtca gcggcaacga tctggtgcgc gtcaccggtt atatggtgcg cctgtcggat
     8941 ctggcgaaat ttcgcgccga aggctcgcgc acgaatacca cctggctggg agaagaagcc
     9001 gcacgtaata cccgcatcct ggaacgacag ccacgcgtag tcagccatga acaacagatg
     9061 cgctttagtc agtaagatca ttgcgttttc ctgcgtcgat gggccaggca gccgcctggc
     9121 attattctta cagggctgca atttgcgctg caagaattgc cataacccgt ggacgatggg
     9181 acgctgtaac gactgcgggg aatgcgtatc gcagtgtccg caccacgccc tcagcattga
     9241 tggcgggaaa gtggtatggc ggtcggacgt ctgcgagcag tgcgatacct gcctgaaaat
     9301 gtgcccacag caggcaacgc caatggcgca gactatgagc attgacgatg tgctgcgtca
     9361 tattcgtaaa gcatcgctgt ttattgaagg tattaccgtc agcggcggag aggcgaccac
     9421 gcaattaccg tttattgtgg cgctatttac ggcgctcaaa gccgatccgc agttacaacg
     9481 gctgacctgt ctggtggaca gtaatggtca gttaagcgag accggctggc aaaaactact
     9541 gccggtttgc gacggcgtaa tgctcgatct gaaagcctgg aagagcgagt gtcatcaccg
     9601 tctgaccgga cgtgataaca cgcatattaa gcacagtatc cgctttcttg ctgcgcgggg
     9661 aaaactggcg gagctgcggt tgctggttat cccgggtcag gtggactatg cggcgcatat
     9721 cgattcactg gcggcgttta ttacttcgct gggcgaggtt ccggtgcgcc tgaatgcctt
     9781 tcatgcgcat ggcgtctatg gcgaagcgaa agcctggcca ggcgcgacgc cgcaagaggt
     9841 ggaacggctg gctgacggat tgcgcgcgcg tggggtggcg aagctgat
//
LOCUS       DAGWFR010000151         9886 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.153, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000151 DAGWFR010000000
VERSION     DAGWFR010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 9886)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9886)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9886
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.153"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            134..604
                     /locus_tag="MOX77_003634"
     CDS             134..604
                     /locus_tag="MOX77_003634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019077605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase-dependent protein"
                     /protein_id="HCA3359057.1"
                     /translation="MKKQQGYTLIETVVAMSLIIILSATGLYGWQRWQQQQRLWQTAC
                     QVRDYLLQLREDAHWHNRDHILRVVSEGGSWCFVSSVATQTSCTPSSPFVFTPDWRDV
                     VLADITPSLAFFGLRNTAWAGHIVLKNAAGEWRLVVSSWGRIRLCERNEAATCQ"
     gene            595..1158
                     /locus_tag="MOX77_003635"
     CDS             595..1158
                     /locus_tag="MOX77_003635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase-dependent protein"
                     /protein_id="HCA3359058.1"
                     /translation="MSITTRGFSLLEVVLAMAIGSILLLGSARFLPALQREIWHNTRQ
                     LSLEDEIWQRTYTVAKHLQRAGYCHGHCIGEGLHLAEQGQCVIVQWDGNNNGVWDTIP
                     AKEADQTGFRMKDNVLETLRGATSCQGKGWEKMTDPNTVLITAFNVERRDITGFSPVL
                     MLHLRGASKAEPQTVIDAQYSVTGFNL"
     gene            1155..1562
                     /locus_tag="MOX77_003636"
     CDS             1155..1562
                     /locus_tag="MOX77_003636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2509 family protein"
                     /protein_id="HCA3359059.1"
                     /translation="MNRERGASSLILALLILILGSLLLQGVNQQQASYAARVTTQSMA
                     IQRQALVQSALEWGRGQLWSGVTEMECRRYSSSGARVCLRRLSGDEVVMAAQDDGMTL
                     WRLGNVIQGSIVFSPHGWSDFCPLKEVALCRIP"
     gene            1547..1867
                     /locus_tag="MOX77_003637"
     CDS             1547..1867
                     /locus_tag="MOX77_003637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HCA3359060.1"
                     /translation="MSHPLNFQRGFSLPEVLVAMVLMVMIVTALSGYQRVLMHTFALR
                     HQYLQIWRQAWQQTALYPFSPADGWNANRMQTTQSGCVSISVTMVSPSGRQGQMTRLH
                     CPNR"
     gene            1883..5254
                     /gene="recC"
                     /locus_tag="MOX77_003638"
     CDS             1883..5254
                     /gene="recC"
                     /locus_tag="MOX77_003638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461913.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit gamma"
                     /protein_id="HCA3359061.1"
                     /translation="MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQ
                     WLQMTLSQKFGIAANIAFPLPASFIWEMFVRVLPDIPKESAFSKQSMSWKLMTLLPQL
                     LDKDEFVLLRHYLTDDTDKRKLFQLSARAADLFDQYLVYRPDWLTQWEAGKTVEGLGE
                     AQNWQAPLWKALVEYTAALGQPRWHRANLYQRFIQTLESATACPPGLPSRVFICGISA
                     LPPVYLKALQALGKHIEIHLLFTNPCRYYWGDIKDPAWLAKLMARQRRHSFEDRHLPL
                     FRENQNPEALFNSDGEQDIGNPLLASWGKLGRDYIYLLSELENSQELDAFVDITPDNL
                     LHRIQADILELESHAVAGVNLEEYSRSDNKRLLDPEDNSLSFHVCHSPQREVEILHDR
                     LLAMLEADPTLTPRDIIVMVADIDSYSPFIQAVFGSAPTERYLPYAISDRRARQSHPV
                     LQAFISLLSLPDSRFVSEDVLALLDVPVLAARFTINEEGLRYLRLWVNESGIRWGIDD
                     DNVRELELPATGQHTWQFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS
                     LLMQLNIWRRGLAQERPLEEWLPVCRDMLNDFFLPDADTEAAMTLIEQQWQAIIAEGV
                     AAEYGDAVPISLLRDELAQRLDQERISQRFLAGPINICTLMPMRSIPFRVVCLLGMND
                     GVYPRQLAPLGFDLMSQKPMRGDRSRRDDDRYLFLEALISAQQTLYISYIGRSIQDNS
                     ERFPSVLVQELVDYIGQSHYLPGDETLTCDESEARVKAHITRLHTRMPFDAQNYQPGE
                     QQSYAREWLPAASQSGKAHSDFVQPLPFTMPETLTLESLQRFWAHPVRAFFQMRLQVN
                     FRSEESEIPDAEPFELEGLTRYQLNQQLLNTLVEEDDAERLFRRFRAAGELPYGAFGE
                     IFWDAQCQEMQQLASRVIACRKPSQSLEVDLLCNGVQLTGWLPQVQEDGLLRWRPALI
                     SVAQGVQLWLEHLVYCASGGSGESRLFLRKEGEWRFPPLDKTQAMAYLAQLIEGYREG
                     MSSPLLVLPESGGAWIKACYDAENDVMLDDDDTLQKARTKFLQAYEGNMMVSGEGEDI
                     WYQRLWRQLESETLQAIIAQSRHYLLPLFRFNQSR"
     gene            5432..8320
                     /gene="ptrA"
                     /locus_tag="MOX77_003639"
     CDS             5432..8320
                     /gene="ptrA"
                     /locus_tag="MOX77_003639"
                     /EC_number="3.4.24.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin"
                     /protein_id="HCA3359062.1"
                     /translation="MPRSTWFKALLLLVALWGPAVQADIGWQPLQETIRKSDKDTRQY
                     QAIRLDNDMVVLLVSDPQAVKSLSALVVPVVSLEDPEAHQGLAHYLEHMCLMGSKKYP
                     QADSLAEYLKRHGGSHNASTAPYRTAFYLEVENDALPGAVDRLADAIAAPLLNKKYAE
                     RERNAVNAELTMARTRDGMRMAQVSAETINPAHPGSHFSGGNLETLSDKPGNPVQQAL
                     IAFHEKYYSSNLMKAVIYSNKPLPELASIAAATYGRVPNKQIKKPEITVPVITEAQKG
                     IIIHYVPALPRKVLRVEFRIDNNSAQFRSKTDELVSYLIGNRSPGTLSDWLQKQGLVE
                     GISADSDPIVNGNSGVFAISATLTDKGLANRDEVVAAIFSYLNTLREKGIDKRYFDEL
                     AHVLDLDFRYPSITRDMDYVEWLADTMIRVPVAHTLDAANIADRYDPAAIKNRLAMMT
                     PQNARIWYISPQEPHNKIAYFVDAPYQVDKISEQTFKNWQQKAQGIALSLPELNPYIP
                     DDFTLIKNDKNYVRPELIVDKADLRVVYAPSRYFASEPKADVSVVLRNPQAMDSARNQ
                     VLFALNDYLAGMALDQLSNQAAVGGISFSTNANNGLMVTANGYTQRLPQLFLALLEGY
                     FSYDATEEQLAQAKSWYTQMMDSAEKGKAYEQAIMPVQMISQVPYFSRDERRALLPSI
                     TLKEVMAYRNALKTGARPEFLVIGNMSEAQATSLAQDVQKQLAANGSAWCRNKDVVVE
                     KKQSVIFEKAGSSTDSALAAVFVPVGYDEYVSAAYSAMLGQIVQPWFYNQLRTEEQLG
                     YAVFAFPMSVGRQWGMGFLLQSNDKQPSYLWQRYQAFFPDAEAKLRAMKPEEFAQIQQ
                     AIITQMRQAPQTLGEEASRLSKDFDRGNMRFDSRDKIIAQIKLLTPQKLADFFHQAVV
                     EPQGMAILSQIAGSQNGKAEYVHPTGWKVWDNVSALQQTLPLMSEKNE"
     gene            8313..>9886
                     /locus_tag="MOX77_003640"
     CDS             8313..>9886
                     /locus_tag="MOX77_003640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HCA3359063.1"
                     /translation="MNDVAETLDPLRLPLTGERLIEASAGTGKTFTIAALYLRLLLGL
                     GGSAAFPRPLTVEELLVVTFTEAATEELRGRIRSNIHELRIACLRESTDNPLYARLLE
                     EISDKKQAAQWLLLAERQMDEAAVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESLLR
                     YQACADFWRRHCYPLPRDIAQVVFDVWKGPKALLKDIDRYLQGEAPVIKAPPSQEETL
                     ASRHEQILARINQVKQQWCEAVSELDALIESSGIDRRKFNRGNQAKWIEKITAWAQEE
                     TKNYQLPEALGKFSQRFLAERTKAGGVTPQHPLFVAIDNLLGEPLSIKDLVLTRALSE
                     IRGTVAQEKRRRGELGFDDMLSRLDTALRSESGEALAAAIRTRFPVAMIDEFQDTDPQ
                     QYRIFRRIWRHQPDTALLLIGDPKQAIYAFRGADIFTYMKARSEVSAHYTLDTNWRSA
                     PGMVNSVNKLFSQMNDAFMFRDIPFSPVKFAPRNQSLQFKVNDAPQPAMTLWLMEGES
                     CGSGDYQSYMAQVCAT"
BASE COUNT         2286 a         2442 c         2828 g         2330 t
ORIGIN      
        1 cctttgtctc aatcttcggc gcggattcct gaaattttgc aacgcgctgc aagacatgaa
       61 cttttttccg taacgcgtcg aacaatctgt atttggcgct cgttattttt cttccgcccg
      121 ccatactgcc gacatgaaaa aacaacaggg ctatacgctc attgaaacgg tggtcgcgat
      181 gtcgctcatt atcattctca gcgccacagg actttatggc tggcaacgct ggcagcagca
      241 acagcgcctg tggcaaaccg catgtcaggt gcgggattac ctgctgcaac ttcgtgagga
      301 cgctcactgg cataaccgcg atcacattct tcgcgtggtc agcgaaggcg gttcatggtg
      361 ctttgtcagc tctgttgcta cgcaaacatc gtgtacgcca tcttccccct ttgtgtttac
      421 gcccgactgg cgtgatgtcg tccttgccga tatcacgccg tcgttagcct tctttggcct
      481 gcgcaatacg gcatgggcag ggcacatcgt gctgaaaaac gctgccggag agtggcgtct
      541 ggtcgtctcc tcctgggggc gaatcaggct atgtgagcgt aacgaggccg ccacgtgtca
      601 ataaccacgc gggggttctc gctactggag gttgtgctgg cgatggcgat aggttccatt
      661 ttactgcttg ggtccgcacg atttttaccg gcgttacagc gtgagatctg gcacaacacg
      721 cgacagttat cgctggaaga tgaaatctgg cagcgaacct ataccgtagc gaagcatctt
      781 caacgtgcgg gttactgtca tggccactgt atcggcgaag ggctacatct tgccgaacag
      841 gggcaatgcg tcatcgttca gtgggacggg aataataacg gggtctggga taccataccg
      901 gcgaaagagg ccgaccagac cgggttccgt atgaaggata acgttctgga gacattacgc
      961 ggagcaacat cttgccaggg taagggatgg gaaaaaatga ccgatcccaa tacggtactc
     1021 atcacggcgt ttaacgttga gcgccgggat ataacgggat tctcgccagt gctcatgctg
     1081 catctgcgtg gcgccagcaa agccgagcct cagacggtta ttgacgcgca atatagcgta
     1141 acgggattta atctgtgaat cgggaacgtg gcgcttcttc gctaatactg gcgcttttaa
     1201 tactgattct gggcagtctg ctactgcaag gcgtaaatca gcagcaggcc agctatgccg
     1261 cccgcgtgac gacgcagagc atggcgatac aacgccaggc gctcgtacag tcggcgctgg
     1321 aatgggggcg agggcagcta tggtcaggcg taaccgaaat ggaatgtcgg cgctattcct
     1381 cttcaggagc gagggtctgt ttgcggagat tatcggggga tgaagtggtg atggcggcgc
     1441 aagatgatgg catgacgtta tggcgtttgg gcaacgtcat tcagggaagc attgtctttt
     1501 ctccccacgg ctggagtgat ttttgtccgt taaaagaggt ggcgttatgt cgcatcccct
     1561 gaattttcaa cgcgggttta gcctcccgga agttttagtg gcgatggttc taatggtaat
     1621 gatcgtcacc gcgctgtcag gctatcagcg ggtattaatg cacacttttg cattacgaca
     1681 ccagtatctc cagatctggc ggcaggcgtg gcagcaaacg gcgctgtatc cattttcgcc
     1741 tgctgacggc tggaatgcca accggatgca gacaacgcaa tcgggatgtg tcagcatcag
     1801 cgtcacgatg gtttcaccct ctggcaggca ggggcagatg acgcgcttgc attgtccaaa
     1861 tcgttaatcg tcaggagtaa ttatgttaag ggtctaccac tccaatcgtc tggatgtgct
     1921 ggaagcgttg atggagttca tcgtcgaacg cgagcggctg gatgatccct ttgaaccaga
     1981 aatgattctg gtacaaagca cgggtatggc gcagtggctg cagatgaccc tttcacaaaa
     2041 gtttggtatt gcggcgaata tcgcttttcc gttaccggcg agttttatct gggagatgtt
     2101 tgtccgcgtg ttgccagata tccccaaaga aagcgctttc agcaaacaaa gcatgagctg
     2161 gaaactgatg accttgctgc cgcagttgct ggataaggat gagtttgtac tgctgcgcca
     2221 ttatctgacc gacgacaccg ataaacgcaa actctttcag ctttccgcgc gcgccgccga
     2281 cctgttcgat cagtatctgg tttatcggcc tgactggctt acgcagtggg aggcgggaaa
     2341 aaccgtggaa ggtctgggag aggcgcaaaa ctggcaggcg ccgctgtgga aagcattggt
     2401 ggaatatacc gccgcgctgg ggcagccgcg ctggcatcgc gccaatctct accaacgctt
     2461 tattcaaacg ctggaaagcg cgaccgcctg cccgccaggg ttgccgtccc gcgtttttat
     2521 ttgcggcatt tccgcgttac cgccagtgta tctcaaagca ttgcaggcgc tgggtaaaca
     2581 tattgaaatc catctccttt ttactaatcc gtgtcggtat tactgggggg atataaaaga
     2641 cccagcctgg ctggcaaaac tcatggctcg ccagcgtcgt cacagttttg aagaccgtca
     2701 tttaccgttg ttccgtgaaa atcagaatcc ggaagcctta tttaacagcg acggtgaaca
     2761 ggatatcggt aatccgctac tggcctcatg gggaaaactg ggacgggatt atatctacct
     2821 gctatctgaa ctggaaaaca gccaggagct ggatgcgttt gttgatatta cgccagataa
     2881 tcttttgcat cggattcagg cggatatcct tgaactggaa agccatgcgg tggcgggcgt
     2941 aaatcttgag gagtattcgc gcagcgacaa taagcgtctg ctcgatcccg aggataacag
     3001 cctctctttt cacgtttgtc acagcccgca gcgcgaggtg gaaatactgc acgatcgcct
     3061 gctggcgatg ctggaagccg atccgacgct aacgccgcgc gacattatcg ttatggtggc
     3121 tgatattgac agctatagcc cgtttatcca ggcggtattt ggtagcgcgc caacggagcg
     3181 ctatctgcct tatgctattt ccgatcggcg ggcgcgtcag tcacatccgg tgttacaggc
     3241 atttatcagt ctgctttcgt taccggacag ccgcttcgtc tccgaggatg ttctggcgtt
     3301 gttagacgta ccggtattgg ctgcccgctt tacgatcaac gaagaagggc tgcgttattt
     3361 gcgcttgtgg gtcaatgagt caggcattcg ctgggggatt gacgatgaca acgtgcgcga
     3421 gctggaactt cctgccacgg ggcagcatac atggcaattt ggcctgacgc gtatgctgct
     3481 ggggtatgcg atggaaagcg cccagggcga gtggcagtcg gttctgcctt atgacgaatc
     3541 cagcggtctg attgctgagc tggtcgggca tctggcttcg ctgctgatgc agcttaatat
     3601 ctggcggcgc ggtctggcgc aggagcgacc tctggaagag tggttgcccg tttgtcgcga
     3661 catgctcaat gatttcttcc tgcccgatgc ggacacggaa gcggcaatga cattgattga
     3721 acagcagtgg caggccatta tcgccgaagg cgtcgcggcg gaatatggcg acgcggtacc
     3781 gatttcgcta ctgcgggatg agctggcgca gcgtctggat caggaacgta ttagccagcg
     3841 cttcctggcg ggccccatca atatttgtac gctgatgccg atgcgttcca ttccgttcag
     3901 agtcgtttgc ctgctgggaa tgaacgacgg cgtatacccg cgccagcttg cgccgttggg
     3961 ctttgacctg atgagccaaa aacccatgcg cggggatcgt agccgtcgcg acgatgaccg
     4021 ctacctgttt ctggaagcgt taatctcggc gcagcagacg ctgtatatca gctacatcgg
     4081 tcgctccatc caggataata gcgaacgctt tccctctgta ctggtgcaag aattggtgga
     4141 ttacatcggg caaagccact atttgccggg cgacgaaacg ctgacctgtg atgagagcga
     4201 agcacgagtc aaagcgcata ttacgcgtct gcatacccgt atgccttttg atgcgcaaaa
     4261 ttaccaaccc ggcgaacagc aaagttatgc cagagagtgg ttgcccgcgg cgagtcagtc
     4321 gggaaaagcg cattctgact ttgtgcagcc gcttcctttt acgatgccgg aaacattgac
     4381 tctggaaagt ctgcagcgtt tttgggccca tccggtacgc gcattttttc agatgcggct
     4441 tcaggttaat ttccgctcgg aagagagtga gattcctgat gctgaaccgt ttgaattaga
     4501 gggattgacg cgatatcaac ttaaccaaca gttgctcaat acgttggttg aagaggacga
     4561 tgccgaacgc ttgttccgcc gttttcgggc tgcgggagag ctgccttacg gcgcgtttgg
     4621 cgaaatattc tgggatgcgc agtgtcagga gatgcagcaa ctggcaagcc gggttatcgc
     4681 ttgccgtaag ccgagccaaa gcctggaagt ggatctgctt tgcaatggag ttcagctaac
     4741 cggctggcta ccgcaggtac aggaggatgg attattgcgc tggcgtcccg ctttaatcag
     4801 cgtggcgcaa ggtgtgcaac tttggctgga acaccttgtc tattgtgcca gcggcggtag
     4861 tggcgaaagt cgcctgtttt tgcgcaaaga gggagaatgg cgatttccgc ctcttgataa
     4921 aacgcaggca atggcttacc tggcgcaact gattgaaggc taccgggaag gcatgtcttc
     4981 tccgctattg gtactgccgg aaagcggcgg cgcatggata aaagcctgtt atgacgctga
     5041 aaatgatgtc atgttagacg acgatgatac tttacagaag gccaggacaa agtttctaca
     5101 ggcttatgaa ggcaacatga tggtgagcgg cgaaggcgaa gatatctggt atcaacgtct
     5161 ttggcgtcag ctggaatcgg aaacgttgca ggctatcatt gcgcagtcac ggcattacct
     5221 gttaccgctg tttcgtttta atcagtctcg ttgattgtat gaaaatcgcg ccattaaaag
     5281 gcttcgacta tgatgcgctc ttcgtcacgg actgattact gataaaaaaa tgctgcctgg
     5341 ttcagcacaa taatatcccg ttccgctcag gtcgatggtt tacgtgacca tacagatgag
     5401 tgggaatgaa agttaatgat gaggtccgtg aatgccccgc agcacctggt tcaaagcgtt
     5461 attgttattg gtcgccctct gggggcctgc agttcaggcg gatatcggtt ggcaaccgct
     5521 gcaagaaact atccgtaaaa gcgataaaga tacccggcag tatcaggcga tacgtcttga
     5581 taatgacatg gtggtgttgc tggtatccga tccgcaggct gtaaagtctc tttctgcgtt
     5641 agtggtgccc gttgtatcgc ttgaagatcc tgaggctcat caggggcttg ctcattatct
     5701 tgagcatatg tgcctgatgg ggtcaaaaaa atatccgcag gcggatagcc ttgccgaata
     5761 ccttaaaaga catggcggta gccacaacgc cagcaccgca ccttatcgaa cagccttcta
     5821 cctggaggtt gaaaacgacg cgcttccagg tgccgtagat cgcttggccg acgccattgc
     5881 cgcgccattg ctcaataaaa agtatgccga acgcgaacga aacgcagtga atgccgagct
     5941 gacgatggcg cgcacccgtg acggtatgcg tatggcgcag gtaagcgccg aaaccattaa
     6001 cccggcgcat ccaggctcgc acttttcagg cggcaatctg gaaacgctaa gcgataagcc
     6061 gggcaatccg gtgcaacagg cgttgatcgc ttttcatgaa aaatactatt catctaatct
     6121 gatgaaggcg gtgatttaca gtaataaacc cttgccggaa ctggcgagta ttgccgccgc
     6181 aacctatggt cgcgtgccga ataaacagat taaaaaaccg gaaattaccg tacctgtcat
     6241 caccgaggcg cagaagggca tcattattca ttacgtgccg gcgctaccgc gtaaagtgct
     6301 gcgcgtggag tttcgtattg ataacaatag cgcgcagttc cgtagcaaga ccgatgaact
     6361 ggtctcttat ctgattggca atcgtagccc ggggacgctc tctgactggc tgcaaaaaca
     6421 aggactggtc gaaggtatta gcgcggattc tgatccgatt gttaatggta acagcggcgt
     6481 atttgccatt tcggcaacgc tgactgataa aggtttggcc aatcgtgatg aagtcgtcgc
     6541 agctatcttt agctatctca atacgttacg tgaaaaaggg atagataaac gttactttga
     6601 cgagctggcg catgtgctgg atctcgactt ccgctatccg tcgattaccc gcgatatgga
     6661 ctatgtcgag tggctggcgg acactatgat ccgcgtcccg gtagcgcata cgctggatgc
     6721 ggcgaatatc gccgatcgtt acgatcctgc cgctatcaaa aatcgcctgg cgatgatgac
     6781 gccgcagaat gcgcgcatct ggtacatcag tccccaggaa ccccataata agattgcgta
     6841 ttttgtggat gcgccttatc aggtcgataa gattagcgaa cagacgttta aaaactggca
     6901 gcaaaaagca cagggcattg cgttgtcgct gccggagtta aacccctata ttcctgatga
     6961 ttttacgctt attaagaatg acaaaaacta cgtgcggcca gaactgattg tcgataaagc
     7021 ggatttgcgc gtggtttatg cgccgagtcg ttatttcgcc agcgagccaa aagctgacgt
     7081 gagtgtggta ttgcgtaacc cgcaggcgat ggacagcgcc cgcaatcagg tactgttcgc
     7141 ccttaatgat tatctggcgg gaatggcgct agatcagctc agcaaccagg cggcagtggg
     7201 cggcattagc ttttccacta acgccaacaa tggtctgatg gtcactgcga acggttatac
     7261 ccagcgtttg ccgcagcttt tcctggcgct gctggaagga tattttagct acgacgccac
     7321 ggaagaacag ctggcgcagg cgaaatcctg gtatacgcag atgatggatt ctgcggagaa
     7381 gggaaaagcc tacgaacagg cgattatgcc ggtgcagatg atttcgcagg tgccttattt
     7441 ttcccgtgat gaacgtcgcg ctttgctgcc gtccattacg ttaaaagagg tgatggccta
     7501 tcgtaatgcg ttaaaaacgg gcgctcgtcc ggaatttctg gttataggaa atatgagcga
     7561 agcccaggcg acctctctgg cgcaagatgt ccaaaaacag ctcgcggcga acggatcggc
     7621 gtggtgtcgt aacaaagacg tggtggttga gaaaaagcag tccgtaatat ttgaaaaagc
     7681 gggcagtagc accgactccg cgttagccgc ggtctttgtc ccggtcggct acgacgagta
     7741 cgtcagcgcc gcctacagcg cgatgttagg tcagattgtt caaccgtggt tttacaatca
     7801 gctacgaacc gaagagcaac tgggatacgc tgttttcgcc tttccgatga gcgttggccg
     7861 tcagtgggga atgggattcc tgctacagag caacgataaa cagccctctt acctgtggca
     7921 acgctatcag gcatttttcc ctgacgccga ggcgaagctg agggcgatga agccggaaga
     7981 gttcgcccaa attcagcagg cgatcattac gcaaatgcgc caggcgccgc aaacgttggg
     8041 cgaagaagca tcccgtttaa gcaaggattt cgatcggggt aatatgcgct ttgactcgcg
     8101 tgataaaatc atcgctcaga taaaattgct gacgccacaa aagcttgccg atttcttcca
     8161 ccaggcggtg gtggaaccac aaggtatggc aatattgtca cagattgccg gtagccagaa
     8221 tggaaaagca gaatacgtgc atccgacagg ctggaaagtg tgggataacg tcagcgcttt
     8281 gcagcaaacg ttacctctaa tgagcgaaaa gaatgaatga tgtcgccgag actcttgatc
     8341 ctctgcgctt gccccttaca ggcgagcgtt tgattgaagc atcagcgggc acaggcaaaa
     8401 cgtttactat cgcggcgctg tatctgcggc tactgctcgg tttaggcggc agcgccgcat
     8461 ttccccgtcc gttgaccgtt gaagaactgc tggtggtaac ctttacggag gccgccactg
     8521 aagagctgcg tgggcgaatc cgcagtaata tccatgagtt gcgcatcgcc tgtctgcggg
     8581 aaagcacgga taatccgctg tatgcccgct tgctggaaga aattagcgac aaaaagcagg
     8641 ccgcgcagtg gttattactg gcagaacgac aaatggacga ggccgcggtt tttaccatcc
     8701 acggtttttg ccagcgtatg ctcagcctga acgctttcga atccggtatg ttgtttgagc
     8761 aacagcttat tgaagacgaa tctttgttgc gttatcaggc ctgcgccgat ttctggcggc
     8821 gtcattgcta tccgctgccg cgcgacatcg cgcaggtggt gtttgacgtg tggaaggggc
     8881 cgaaggcgct cttaaaagat atcgatcgtt atctgcaggg cgaagcgccg gtcattaaag
     8941 cgccgccatc gcaggaggag acgctggcat cgcgccatga acagatcctg gcgcgcatca
     9001 accaggtgaa gcagcagtgg tgtgaggcgg ttagcgagct ggacgcgctg atcgaatcat
     9061 ccggcatcga tcgcagaaaa ttcaaccgcg gcaatcaggc gaaatggatc gaaaagatca
     9121 ccgcgtgggc gcaagaagag accaaaaatt atcaattacc cgaggcgttg ggaaaatttt
     9181 cacagcgttt tttagctgag cgcaccaaag ctgggggcgt gacgccccag cacccattgt
     9241 ttgtcgccat tgataacctg ttgggcgaac cgctatcgat taaagatctg gttcttaccc
     9301 gagcgctctc agagatccgt ggaacggtgg ctcaggaaaa acgacggcgc ggcgagctgg
     9361 ggtttgacga tatgctcagc cgtttagata ccgcgctgcg tagtgaaagc ggcgaggcgc
     9421 tggctgcggc gattcgtacc cgttttccgg tggcgatgat cgatgaattt caggataccg
     9481 acccacaaca gtaccgtatt tttcgccgta tctggcgaca tcaacccgat acggcgctat
     9541 tgctgattgg cgatcctaaa caggcgattt atgcgtttcg tggcgcggat atctttacct
     9601 acatgaaggc tcgcagcgaa gtgagcgcgc actataccct tgacactaac tggcgctccg
     9661 cgccggggat ggtgaatagc gttaacaagc tgttcagtca gatgaatgac gcctttatgt
     9721 tccgcgatat tcccttcagt ccggtaaagt ttgcgcccag aaaccagtcg ctgcaattta
     9781 aagtgaatga cgcgcctcaa ccggcgatga ccctgtggct aatggagggg gaaagctgcg
     9841 gttcgggcga ttatcaaagt tatatggcgc aggtgtgcgc cacgca
//
LOCUS       DAGWFR010000152         9781 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.154, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000152 DAGWFR010000000
VERSION     DAGWFR010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 9781)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9781)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9781
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.154"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..71)
                     /locus_tag="MOX77_003641"
     CDS             complement(<1..71)
                     /locus_tag="MOX77_003641"
                     /EC_number="4.1.1.112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462263.1"
                     /note="catalyzes the decarboxylation of oxaloacetate to
                     form pyruvate and carbon dioxide; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxaloacetate decarboxylase subunit gamma"
                     /protein_id="HCA3359064.1"
                     /translation="MTNAALLLGEGFTLMLLGMGFVLA"
     gene            complement(227..844)
                     /gene="ttdB"
                     /locus_tag="MOX77_003642"
     CDS             complement(227..844)
                     /gene="ttdB"
                     /locus_tag="MOX77_003642"
                     /EC_number="4.2.1.32"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L(+)-tartrate dehydratase subunit beta"
                     /protein_id="HCA3359065.1"
                     /translation="MTKKILTTPIKDEDLADIKAGDIIYLNGHIVTCRDVAHRRLIEG
                     GRELPVDVRGGAILHAGPIVRPIKGEDDKFEMVSVGPTTSMRMEKFEKEFIAQTGVKL
                     IVGKGGMGKGTEEGCAEHKALHCVFPAGCAVVAAVCVEEIEDAQWRDLGMPETLWVCR
                     VKEFGPLIVSIDTHGNNLFEQNKIIFNQRKEIVADEICQNVSFIK"
     gene            complement(844..1743)
                     /gene="ttdA"
                     /locus_tag="MOX77_003643"
     CDS             complement(844..1743)
                     /gene="ttdA"
                     /locus_tag="MOX77_003643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L(+)-tartrate dehydratase subunit alpha"
                     /protein_id="HCA3359066.1"
                     /translation="MSKSEQISHMTDVMAKFVGYTGKVLPDDVTAKLEDLHKKETSKL
                     ADVIFTTMIENQRLAKELDRPSCQDTGVIQFLVECGTNFPLIGELEALLREAVIKATV
                     DSPLRHNSVETFDEYNTGKNVGKGTPTVFWEIVPNSDQCSIYTYMAGGGCSLPGKAMV
                     LMPGAGYEGVTRFVLDVMTSYGLNACPPLLVGVGVATSVETAALLSKKALMRPIGSHN
                     ENERAASLEKMLEDGINKIGLGPQGMSGNTSVMGVNIENTARHPSTIGVAVNVGCWSH
                     RKGHIVFDKDLNYTITSHSGVNF"
     gene            complement(1776..3044)
                     /locus_tag="MOX77_003644"
     CDS             complement(1776..3044)
                     /locus_tag="MOX77_003644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13/DASS family transporter"
                     /protein_id="HCA3359067.1"
                     /translation="MEPITLTLCLLVFAIVMFVWEKVPLAVTSMIVCVALVITGVLNI
                     KQAFAGFIDTNVILFVAMFIVGGALFETGMANKVGGVITRFAKTEKQLIFTIMVVVGL
                     MSGVLSNTGTAAVLIPVVIGVAAKSGFSRSRLLMPLVFAAALGGNLSLIGAPGNLIAQ
                     SALQNIGGGFGFFEYAKIGLPMLICGILYFLTIGYRFLPNNATGGEVGSVGEQRDYSH
                     VPQWKQRLSLVVLIATILGMIFEKKIGVSLAVTGCIGALVLVVSGVLTEKQAYKAIDS
                     QTIFIFGGTLALAKALEMTGAGKLVADYVIGMLGQNSSPFMLLIAVFALSVVMTNFMS
                     NTATTALLVPVSLSIAAGMGADPRAVLMATVIGGSCAYATPIGMPANMMVLSAGGYKF
                     VDYAKAGIPLIIVSTIVSLILLPILFPFHP"
     gene            complement(3255..3920)
                     /locus_tag="MOX77_003645"
     CDS             complement(3255..3920)
                     /locus_tag="MOX77_003645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HCA3359068.1"
                     /translation="MQRPKLGKIKLLSAKEQVAAVLRKAILSRELVEGQEITLEGIAG
                     MVGVSSMPVREAFQILAADGLIKVRPNKGAVVLGINEQTIREHYEIRALLESEAVAKA
                     SRPGTDISRIAEVHYAAEKALAENNSAEYSDLNQAFHMEIWNVAGNEKMKMLLCNMWN
                     GLSMGHKVTEEEYAVISIQEHKSILQALELHDETLARQRMREHIIRSMENMLTRYVGD
                     PSA"
     gene            complement(3907..4536)
                     /locus_tag="MOX77_003646"
     CDS             complement(3907..4536)
                     /locus_tag="MOX77_003646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HCA3359069.1"
                     /translation="MKKIQRTQTRDHITQMLRYEILSGNIKAGEELAQESIAEQLGLS
                     RMPVREALQSLEQEGFLIRLPNRHMQVAHLEADRVSHIFRVIAAMAAEMFSLIPSEVG
                     DALLIRAQALAVAEDKSCELECHAMLISYVNNRYLEKVYQQFLDGYVSYVILHLKKDN
                     QESAQLFAELADVIRQGRRDEIGQVMQRYFLSLAEIMRQHMKDWESAEA"
     gene            complement(4656..5594)
                     /gene="mdh"
                     /locus_tag="MOX77_003647"
     CDS             complement(4656..5594)
                     /gene="mdh"
                     /locus_tag="MOX77_003647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000861594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HCA3359070.1"
                     /translation="MKVAVLGAAGGIGQALALLLKNQLPSGSELSLYDIAPVTPGVAV
                     DLSHIPTAVKIKGFSGEDATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLV
                     QQIAKTCPKACVGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIIRSNTFVAE
                     LKGKLPTEVEVPVIGGHSGVTILPLLSQIPGVSFTEQEAAELTKRIQNAGTEVVEAKA
                     GGGSATLSMGQAAARFGLSLVRALQGEKGVVECAYVEGDGQYARFFSQPLLLGKNGVE
                     ERKSIGTLSTFEQHSLDAMLDTLKKDIQLGEDFINK"
     gene            6008..6478
                     /gene="argR"
                     /locus_tag="MOX77_003648"
     CDS             6008..6478
                     /gene="argR"
                     /locus_tag="MOX77_003648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001257852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator ArgR"
                     /protein_id="HCA3359071.1"
                     /translation="MRSSAKQEELVRAFKALLKEEKFSSQGEIVLALQDQGFENINQS
                     KVSRMLTKFGAVRTRNAKMEMVYCLPAELGVPTTSSPLKNLVLDIDYNDAVVVIHTSP
                     GAAQLIARLLDSLGKAEGILGTIAGDDTIFTTPASGFSVRDLYEAILELFEQEL"
     gene            6843..7106
                     /gene="yhcN"
                     /locus_tag="MOX77_003649"
     CDS             6843..7106
                     /gene="yhcN"
                     /locus_tag="MOX77_003649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide/acid stress response protein YhcN"
                     /protein_id="HCA3359072.1"
                     /translation="MKIKTTVATLSILSVLSFGAFAAEPISAEQAQNREAIGSVSVSA
                     IGSSPMDMNAMLSKKADEQGATAYHITEARSGSNWHATAELYK"
     gene            7210..7476
                     /gene="yhcN"
                     /locus_tag="MOX77_003650"
     CDS             7210..7476
                     /gene="yhcN"
                     /locus_tag="MOX77_003650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide/acid stress response protein YhcN"
                     /protein_id="HCA3359073.1"
                     /translation="MKTKYIIASLGLATLLSFGANAAVHQVNAEQAQNLQPMGTISVS
                     QIGSTPMDMRQEIVAKAEKAGANSYRIIELKEGDNWHATAELYK"
     gene            complement(7536..7808)
                     /locus_tag="MOX77_003651"
     CDS             complement(7536..7808)
                     /locus_tag="MOX77_003651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3359074.1"
                     /translation="MNVYTFDFNDIKNQSDFYREFTQTFGLASEKVSDLDTLWDAVMS
                     DILPLPLEIEFVHLPDKLRRRYGALILLFDEAEEELEGRLRFNVRH"
     gene            complement(7980..>9781)
                     /gene="aaeB"
                     /locus_tag="MOX77_003652"
     CDS             complement(7980..>9781)
                     /gene="aaeB"
                     /locus_tag="MOX77_003652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="p-hydroxybenzoic acid efflux pump subunit AaeB"
                     /protein_id="HCA3359075.1"
                     /translation="EPYSGAIRYRGMLRIIGTFIGCIAALIIIISMIRAPLLMILVCC
                     VWAGFCTWISSLVRIENSYAWGLSGYTALIIVITIQTEPLLTPQFALERCSEIVIGIG
                     CAILADLLFSPRSIKQEVDRELDCLLVAQYQLMQLCIKHGDSEEVDNAWGDLVRRTAA
                     LEGMRSNLNMESSRWVRANRRLKALNTLSLTLITQSCETYLIQNTRPELITDTFRELF
                     ETPVETVQDVHRQLKRMRRVIVWTGERETPVTLYSWVGAATRYLLLKRGVISNTKISA
                     TEEEILQGEPVVKVESAERHHAMVNFWRTTLSCILGTLFWLWTGWTSGNGAMVMIAVV
                     TSLAMRLPNPRMVCIDFIYGTLAALPLGLLYFLVIIPNTQQSMLLLCLSLAVLGFFIG
                     IEVQKRRLGSMGALASTINIIVLDNPMTFHFIQFLDSALGQIVGCMLAFIVILLVRDK
                     SKDRTGRVLLNQFVSAAVSAMTTNVVRRKENRLPALYQQLFLLMNKFPGDLPKFRLAL
                     TMIIAHQRLRDAPIPVNEDLSVFHRQLRRTADHVISAGSDDKRRRYFGQLLDELDIYQ
                     EKLRIWEAPPQVTEPVKRLTGMLHKYQNALTDS"
BASE COUNT         2595 a         2596 c         2229 g         2361 t
ORIGIN      
        1 gccagcacga atcccatgcc gaggagcatc agagtgaagc cttcacctaa tagcagagct
       61 gcattagtca taaaatagcc ttcaggcagg aggcacgata atggggctat ttatgacgat
      121 gaaataataa gggtggattt ccctgagccg ccccggccag agcccttggt tattattatc
      181 gtcataacgt attaccacca ttatcgtgca atttacgtaa tcaggtttat ttgatgaaac
      241 ttacgttctg gcatatttca tcagcgacga tctctttacg ctgattaaaa ataattttgt
      301 tctgttcaaa cagattattc ccatgggtat caatagaaac aatcagcggg ccaaactctt
      361 taacccgaca gacccacagc gtttccggca tccccagatc gcgccattgg gcatcttcaa
      421 tttcttccac gcacacggcg gctacaaccg cacaaccggc agggaatacg cagtgcagcg
      481 ctttgtgttc agcacagccc tcttcggtac ctttacccat accgccttta cctacaatta
      541 atttcacgcc agtctgcgca ataaactctt tttcgaattt ctccatacgc atgctggtgg
      601 ttgggccaac ggagaccatt tcaaacttat cgtcttcgcc tttaattggg cggacaatgg
      661 ggccagcgtg taaaatagcg ccgccgcgaa catctaccgg aagttcgcga ccaccttcaa
      721 ttaaacggcg atgggctacg tcacggcagg taacaatatg accgttgaga taaataatat
      781 cgccagcctt aatatccgct aaatcttcat ctttaattgg cgtagtcagg atttttttag
      841 tcatcagaaa ttcactccgc tgtgagacgt aatggtgtaa ttcaaatctt tatcgaaaac
      901 gatgtgccct ttacggtgcg accagcagcc gacgtttacc gccacgccga tggtagaagg
      961 atgacgtgcg gtgttttcaa tgttcacgcc cataacggag gtattaccgg acatcccctg
     1021 cggccccagg ccaattttgt taatgccgtc ttccagcatt ttttccagcg aggctgcacg
     1081 ctcattctcg ttatgcgaac cgatcggacg catcagcgct tttttcgata gcagtgccgc
     1141 cgtttcaaca gaggtcgcta cgcccacgcc aaccagcagc ggcggacaag cgttgaggcc
     1201 gtagctggtc atcacatcca gtacaaagcg ggtcacacct tcatagcctg cacccggcat
     1261 cagcaccatc gctttccccg gcagagaaca accaccgccc gccatatagg tataaatgct
     1321 gcactgatcg gaattgggaa cgatttccca gaagaccgtc ggcgtacctt tacccacgtt
     1381 tttaccggtg ttgtattcat caaaagtttc tacgctgttg tggcgcagcg gagaatctac
     1441 agttgctttg atcaccgcct cacgcaacaa cgcttccagc tcgccaatca gcggaaagtt
     1501 cgtcccgcac tccaccaaaa actgaatgac accggtgtcc tggcaggaag gtcgatccag
     1561 ctctttcgcc agacgctggt tctcaatcat ggtagtaaag atgacgtcgg ccagtttact
     1621 ggtctctttc ttatgcaaat cttccagttt tgcagtgaca tcatcaggca aaactttgcc
     1681 ggtatatccc acaaacttgg ccataacgtc ggtcatatgg gatatctgtt cacttttgct
     1741 cataaatgct ccttagtcag aacagcttcc gttaattacg gatgaaaagg gaaaaggatt
     1801 ggcagcagga tcaagctgac aatggttgaa acgataatca gggggatacc ggccttagcg
     1861 tagtcgacaa atttatagcc acccgcggag agcaccatca tgttggcagg cataccgata
     1921 ggagttgcgt aggcgcagga accgccaatg accgtcgcca tcagaaccgc acgcgggtcg
     1981 gcccccatac ctgcggcaat ggacaaactc accggcacca atagcgctgt cgttgcggta
     2041 ttggacataa agttggtcat cacaacggat aaggcgaaaa cggcgatcag caacatgaac
     2101 ggtgaggagt tttgccccag catgccgatt acatagtccg caaccagctt gcctgccccg
     2161 gtcatttcca gcgcttttgc cagcgccagg gtgccgccaa agataaaaat agtctgtgaa
     2221 tcaatggctt tataggcctg tttttccgtg agtacgccgc ttacgaccag cacaagagcg
     2281 ccaatacaac cggtcacggc caggctgaca ccgatcttct tctcaaagat catgccgagg
     2341 atcgttgcga tcaacaccac gagtgagagc cgttgtttcc actgtggaac atggctgtag
     2401 tcacgttgct ccccgacgct ccccacctca ccgccggtcg cattattcgg cagaaagcga
     2461 tagccaatag tcaggaagta gagaatgccg cagatgagca tcgggagacc gatttttgcg
     2521 tattcaaaaa agccaaagcc gccgccaata ttctgtagcg cagactgcgc gataagattt
     2581 cccggcgcgc caattaacga caggttaccg cccaacgcag cggcgaaaac cagcggcatc
     2641 agtagacgag aacgcgagaa gcccgatttt gccgccacgc cgatcaccac cggaatcaaa
     2701 accgcagcgg taccggtgtt agagaggacg ccagacatca aacccaccac caccataatg
     2761 gtgaagatca gctgtttttc tgttttcgcg aagcgcgtga tgacgccgcc cactttgttt
     2821 gccataccgg tctcaaacaa cgcaccgccc acgataaaca tcgcgacaaa gaggatgacg
     2881 ttagtgtcga taaagccagc aaaggcctgt ttaatattca gaacgccggt gataactaag
     2941 gccacgcaga caatcatgga agtgacggcc agcggcactt tttcccatac aaacatgacg
     3001 atagcgaaca ccaataaaca tagggtaagg gtaatgggtt ccatatttat aattatccaa
     3061 tcaatgatat atgatattgt atccaatatt gacgaggaga aattattccc atacaaaaaa
     3121 taagtcaaat cgtttctcag gaaagatgca ggagtgggat ctacatcaag atcgtagttg
     3181 gatcgttact ggacgtgatt aatagaattg aagaattggt tgaagcgcct gcgatactca
     3241 cgcaggcgaa aagatcaggc agaagggtca ccaacatagc gggtcagcat attctccatt
     3301 gagcgaataa tgtgttcgcg catgcgctgg cgtgccaatg tttcatcatg aagttcaaga
     3361 gcttgcagaa tacttttatg ttcctgaatg gaaatcacgg catactcttc ttcggtgacc
     3421 ttatggccca tcgacaggcc gttccacata ttacagagca acattttcat tttttcgttg
     3481 ccagcaacat tccatatttc catatgaaat gcctgattca ggtcggagta ttccgccgag
     3541 ttattttccg cgagagcctt ttcagcggca taatgcacct cggctatccg cgaaatatcg
     3601 gtgccaggac gagaagcttt agccaccgcc tcactttcta acagcgcgcg aatttcatag
     3661 tgttcacgga tcgtttgttc attgatgccc aacaccaccg cccctttatt agggcgcact
     3721 tttatcagcc catccgccgc cagaatctga aacgcctcgc gcactggcat actggacacg
     3781 ccgaccattc cggcaatgcc ttctaacgta atctcttgcc cttccactaa ctccctcgaa
     3841 agaatcgctt tacgcagcac cgccgcgacc tgttctttcg ctgaaagaag cttaatcttc
     3901 cctaacttag gcctctgcac tttcccaatc cttcatatgt tgacgcatta tttctgctaa
     3961 agagaggaaa taacgctgca taacttgccc aatctcatca cgccgcccct ggcgtatgac
     4021 gtcagccagt tcagcgaaaa gctgcgccga ctcctgatta tcttttttca gatgcaaaat
     4081 aacataagag acataaccgt ccaggaactg ctgatacacc ttttccagat agcggttatt
     4141 cacataagaa atcagcatcg catgacactc cagttcgcag gatttgtctt ctgcgacagc
     4201 cagcgcttgc gcacgtatca ggagggcatc gcctacttcg ctgggtatca gcgaaaacat
     4261 ttcggcggcc atcgcggcaa tcacgcgaaa aatatgactc acgcgatcgg cctcaagatg
     4321 cgcgacctgc atgtgcctgt tgggcagtcg gattaaaaaa ccttcctgtt cgagtgactg
     4381 tagcgcttct cgaaccggca ttcgtgaaag accgagctgc tccgcaatac tttcctgcgc
     4441 gagttcttct cccgctttta tattgccgga aagaatttca tagcgaagca tttgcgtaat
     4501 gtgatcgcgg gtttgcgttc tttggatctt tttcacgacg ttctcgttaa taaccgataa
     4561 gacgtgagga gtttagcaga tttagtgctt gatttcgtgg cttgtttata gttaaagaag
     4621 ccggagcaaa agccccggca tcgggcagga acagcttatt tattaataaa atcttcaccc
     4681 aactgaatat cttttttcag cgtatccagc atagcgtcca gcgaatgttg ctcgaaagtg
     4741 ctcagtgtgc cgatggattt acgctcttct acgccgtttt tacccagcag cagcggctga
     4801 gagaagaaac gggcatactg accgtcgcct tccacatagg cgcattccac cacgcctttt
     4861 tcgccctgca gagcgcgaac cagagaaaga ccgaaacgcg cggcagcctg gcccatagag
     4921 agggttgccg atccgccgcc ggctttcgcc tcgacgactt cagtaccggc gttctgaata
     4981 cgtttagtca gctcggccgc ttcttgttcg gtaaaactta cgcctggaat ctgcgatagc
     5041 agcggcagaa tcgtcacgcc ggagtgcccg ccaatcaccg gaacttcaac ttccgttggc
     5101 agcttacctt tcagctctgc gacaaaggta ttagagcgga tgatatccag cgtggtaacg
     5161 ccaaacagtt tgtttttgtc gtatacgcct gcttttttca acacttccgc cgcaatcgca
     5221 acggtggtgt tcaccgggtt ggtgataatg cccacgcacg ctttcgggca ggttttagcg
     5281 atctgctgca ccaggttttt cacgatgccg gcgttaacgt taaacaggtc ggaacggtcc
     5341 atacccggct tacgcgccac acccgcagaa atcagtacta cgtcagcgcc ttcaagcgcc
     5401 ggggttgcgt cttcaccgga gaaacctttg atttttacag cggtggggat gtggcttaaa
     5461 tcaacggcca caccgggagt cactggagcg atgtcgtaca gggagagttc tgaacctgaa
     5521 ggcagttggt tttttaaaag taatgccagc gcctgaccga taccaccagc agcgccgagg
     5581 actgcgactt tcatcctaaa ctccttatta tatgattagc taagtgtcta ttgctccgcg
     5641 gcggcgacct taattcacaa attcaatgat tacaatcctc actcatcaag aatgcggagt
     5701 cgcgcaattt tggcttttat gcatttaatt tgcgtaatcc ggatcggctg caaccagaga
     5761 gcaacgttct acaggtggtg acaatatacc ctactaccct ctcaaaacaa catcattttg
     5821 ataacaatta atttactttt aatcttattt gcgaggcgtg acacaggcat gtttcttgat
     5881 tacgaaattt gataaaattc cgctctttca taacattatt tcagccttaa acaaggcaga
     5941 ctgtttgcat aaaaattcat ctgtatgcac aataatgttg tttctaccgc catattacgg
     6001 gtgacttatg cgaagctcgg ctaaacaaga agaactagta agagcgttta aagcgctcct
     6061 caaagaagaa aaattcagct cacagggcga aatcgtcctc gcgttgcagg atcagggctt
     6121 tgaaaatatc aatcagtcca aggtctcgcg catgttgact aagttcggcg cagtgcgtac
     6181 acgtaacgca aaaatggaaa tggtgtactg tcttccggct gaactgggcg tcccaacaac
     6241 atccagtccg ttgaaaaatc tggtgctgga tatcgactat aacgatgctg tcgtggtgat
     6301 tcataccagc cccggcgcgg cacaactcat tgcgcgcctg ctggattcac tggggaaagc
     6361 agaaggtatt ctcggcacga ttgccggcga cgatactatc ttcactacgc ctgccagcgg
     6421 cttttccgta agagatctgt acgaagccat tctggaactt tttgaacaag agctttagtc
     6481 ccacttcctc cgtcgtcgta cggcggaggc atctttttgc cctctcccct cgccgctttc
     6541 ctgtacggct atcatttggc aaatcatgcc cttaaacatt caccacatga atgaaaaatc
     6601 aaaaaaacgc acaaaatgtc aattttttta accagttgat tttcttttat ttttcaaacg
     6661 acagcggcga aaaacagcaa ttttaattcc ataacgttat aaaaaataaa atttttaatg
     6721 tctttaaaaa gcagaaacaa ttagcgtggt attaattaat tgcgtgatta gtgtatactt
     6781 aattttgtga tgagggtcac gaaacaaaga ccccagtaaa ggaattcgac gaggtaaaaa
     6841 tcatgaaaat caaaaccact gttgcaacat taagcattct gtccgttctc tcttttggcg
     6901 ctttcgccgc agaacctatc agcgcagagc aagcgcaaaa ccgtgaagca atcggatcgg
     6961 tttcagtcag cgctatcggc tcatcgccta tggatatgaa tgccatgctg agcaaaaaag
     7021 cagatgaaca aggcgctacg gcctaccaca ttaccgaagc gcgtagcggc agcaactggc
     7081 acgccactgc cgaactgtac aaataaaatt cacctgccat cgcatataac gtgtcgttac
     7141 ttcgcggaga tatcgcataa gaaaagccca ttaatccgcg aggttgaccc tataaaggaa
     7201 taaaagacca tgaaaacgaa atacattatc gcatcactcg gcctggccac tctgctctct
     7261 ttcggcgcaa atgccgcagt acaccaggtt aacgcggaac aggcgcagaa tctgcaaccg
     7321 atgggcacca tttccgtctc gcagattggc agtacgccaa tggatatgcg ccaggagatc
     7381 gtcgctaaag ccgaaaaagc aggcgctaat agctatcgca tcatcgaatt aaaagaaggt
     7441 gataactggc acgccaccgc cgagttgtat aagtaaacct tcgtcgtcta acccgacgac
     7501 ttgcccccgc atgccggggg cttttttatg ctttttcaat gccggacatt aaaccgtagc
     7561 cgtccctcca gctcttcttc cgcttcatca aagagtaaaa tcagcgcccc gtagcgcctg
     7621 cgcagtttat caggcaggtg aacgaactca atctctagcg gtaggggtaa gatatcgctc
     7681 attaccgcat cccataatgt atcaagatcg cttactttct cactggcaag gccaaacgtc
     7741 tgcgtaaact cgcgataaaa atcgctttgg tttttaatat cattaaaatc aaatgtatag
     7801 acattcatag ccagccacca tccccgacag acaattgtct gttttactac taagcatcat
     7861 tatgcagagg tttcacttcc agaaacgctt ttagccccgg agcactcttg cgctgttttt
     7921 gtatctcaaa taagtatagt cataaaaaaa ccgacgcttt tggcatcggt tcttgtggat
     7981 tagctatcgg taagcgcgtt ctggtattta tgtaacatgc ccgtcaggcg tttaaccggt
     8041 tccgtcacct gcggcggcgc ctcccagata cgtaatttct cctgatagat atccagctca
     8101 tccagcaact gaccaaagta gcgtcgccgt ttatcatcgc ttccggcgga aataacatgg
     8161 tctgcggtac gacgaagctg gcggtggaac actgacagat cttcattaac cggtatcggc
     8221 gcgtcgcgca gacgttgatg agcaatgatc atcgttagcg ccaggcggaa cttcggcaaa
     8281 tcgcctggga atttattcat cagcaaaaag agttgctgat ataacgcagg cagacggttt
     8341 tctttacggc gtaccacgtt ggtcgtcatt gccgagaccg cagcggaaac aaactgatta
     8401 agcagcacgc gaccggttcg atctttggat ttatcacgca ccagcaggat gacgataaac
     8461 gccagcatac agccgacaat ttgccccaac gcgctgtcga ggaactggat gaaatggaac
     8521 gtcatcggat tatccaacac aataatgtta atcgtactgg ccagcgcccc catcgacccc
     8581 agacgccgtt tctgaacttc aataccgata aagaacccca ataccgccag gctcaaacat
     8641 aacaacagca tactttgctg cgtattggga ataatcacca ggaaatagag caatcccagc
     8701 ggcaacgccg ccagagtgcc ataaataaaa tcaatgcaga ccatgcgcgg attgggtaaa
     8761 cgcatcgcca gcgaggtcac cacggcaatc atcaccatcg cgccattacc cgatgtccag
     8821 ccggtccata gccagaataa tgtccccaga atgcaggaaa gcgtggtgcg ccagaagttc
     8881 accatcgcat ggtggcgttc agcggattcc actttaacta cgggctcgcc ttgcaggatc
     8941 tcttcttccg tcgcgctgat tttggtgtta ctgatcacgc cgcgtttaag caacagatag
     9001 cgcgttgcag cgcctaccca gctataaagc gtgacgggcg tttcgcgctc gccggtccaa
     9061 acaatgacac gccgcatccg ttttaactgc ctgtggacgt cctgtaccgt ttcaaccggc
     9121 gtctcgaaca gttcccggaa tgtatcggta atcagttccg gccgcgtgtt ttgaataaga
     9181 taagtttcac aggattgcgt aatcagcgtg agcgaaagcg tattcaacgc tttcaggcgg
     9241 cggttagcgc gtacccagcg cgaagattcc atattcagat tacttcgcat cccctccagc
     9301 gccgccgtgc gtcgcaccag atcgccccag gcgttgtcga cttcttcgct gtcgccatgc
     9361 ttaatacaaa gttgcattag ctgatattgc gctaccagta aacagtccag ttcgcgatca
     9421 acctcctgct ttatcgatcg cggcgagaaa agcagatccg ctaaaatagc gcagccaatg
     9481 ccgatgacga tttcgctaca gcgctcaagc gcaaattgcg gcgtaagcag cggctccgtc
     9541 tgaatggtaa tcacaatgat cagcgcagta taacctgaca gtccccacgc ataagagttt
     9601 tcgatccgta ctaaagagga gatccaggta caaaaaccgg cccagacaca gcacaccaga
     9661 atcatcaata gcggcgcgcg gatcatagag ataataatga taagcgcggc gatacagcca
     9721 ataaacgtcc cgataatacg caacattccg cgataacgga tagcgccgga atagggttcc
     9781 c
//
LOCUS       DAGWFR010000153         9722 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.155, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000153 DAGWFR010000000
VERSION     DAGWFR010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 9722)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9722)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9722
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.155"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..231)
                     /gene="ribD"
                     /locus_tag="MOX77_003653"
     CDS             complement(<1..231)
                     /gene="ribD"
                     /locus_tag="MOX77_003653"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459411.1"
                     /note="riboflavin biosynthesis protein which catalyzes the
                     deamination and reduction steps in the riboflavin
                     biosynthesis pathway; catalyzes the formation of
                     5-amino-6-(5-phosphoribosylamino)uracil from
                     2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine
                     and the formation of
                     5-amino-6-(5-phosphoribosylamino)uracil from
                     5-amino-6-(5-phosphoribitylamino)uracil; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase"
                     /protein_id="HCA3359076.1"
                     /translation="MQDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHH
                     RAGEPHAEVHALRMAGAKAKGATAYVTLEPCSH"
     gene            complement(235..684)
                     /gene="nrdR"
                     /locus_tag="MOX77_003654"
     CDS             complement(235..684)
                     /gene="nrdR"
                     /locus_tag="MOX77_003654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017458860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NrdR"
                     /protein_id="HCA3359077.1"
                     /translation="MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVA
                     ELVMPRVIKSNDVREPFNEDKLRSGMLRALEKRPVSADDVEMALNHIKSQLRATGERE
                     VPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKDFGEEIARLQD"
     gene            836..1375
                     /locus_tag="MOX77_003655"
     CDS             836..1375
                     /locus_tag="MOX77_003655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3251 domain-containing protein"
                     /protein_id="HCA3359078.1"
                     /translation="MTRCYLRILLVGSLLSLTACAPQSEVRQMHQSISTLNKEMTQLN
                     QETVKITQQNKLNADSTRGVYLLPGANTPARLESQIGTLRMTLLEITPVADGAHATLR
                     IQGKSRDPLPAFSATVEYGQIQGTTENYQEVNAQSLLVNAPASLLAPSDVNIPLPLKG
                     ITPAQLGFIRIHDIQPVNQ"
     gene            1675..2538
                     /locus_tag="MOX77_003656"
     CDS             1675..2538
                     /locus_tag="MOX77_003656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-specific channel-forming protein Tsx"
                     /protein_id="HCA3359079.1"
                     /translation="MKKTLLAVSAALALTSSFTANAAENDQPQYLSDWWHQSVNVVGS
                     YHTRFSPKLNNDVYLEYEAFAKKDWFDFYGYIDIPKTFDWGNGNDKGIWSDGSPLFME
                     IEPRFSIDKLTGADLSFGPFKEWYFANNYIYDMGDNKASRQSTWYMGLGTDIDTGLPM
                     GLSLNVYAKYQWQNYGASNENEWDGYRFKVKYFVPITDLWGGKLSYIGFTNFDWGSDL
                     GDDPNRTSNSIASSHILALNYDHWHYSVVARYFHNGGQWQNGAKLNWGDGDFSAKSTG
                     WGGYLVVGYNF"
     gene            complement(2621..2728)
                     /locus_tag="MOX77_003657"
     CDS             complement(2621..2728)
                     /locus_tag="MOX77_003657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000176312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin Ldr family
                     protein"
                     /protein_id="HCA3359080.1"
                     /translation="MTLTELSITIWHDLAAPTLVGIATGLFLGWWHRRK"
     gene            complement(3171..3518)
                     /locus_tag="MOX77_003658"
     CDS             complement(3171..3518)
                     /locus_tag="MOX77_003658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH nuclease family protein"
                     /protein_id="HCA3359081.1"
                     /translation="MAIIPKNYARLESGYREKALKLFPWVCGRCSREFVYSNLRELTV
                     HHIDHDHTNNPEDGSNWELLCLYCHDHEHSKYTEADQYGSTVIAGEDAQKDVGEATYN
                     PFADLKAMMNKKK"
     gene            complement(3688..4380)
                     /locus_tag="MOX77_003659"
     CDS             complement(3688..4380)
                     /locus_tag="MOX77_003659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YafY family transcriptional regulator"
                     /protein_id="HCA3359082.1"
                     /translation="MTRRADRLFQIVQILRGRRLTTAALLAQRLAVSERTIYRDIRDL
                     SLSGVPVEGEAGSGYRLMAGFDLPPLMLTHRESEALMVAIRLLKTWGGDSLSRELESA
                     QEKVLAILPEESRRKAEQTRIYAPDLGTSPHSRSAFDLIHQAVSAQQVLALHYRDEAG
                     HLSSRDIQPLGLFFWGEHWLLVAWCERREDYRCFRLDRCLQITPLNRRFRETIDRSLR
                     DFLRKVEHEKMP"
     gene            complement(4406..4771)
                     /locus_tag="MOX77_003660"
     CDS             complement(4406..4771)
                     /locus_tag="MOX77_003660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HCA3359083.1"
                     /translation="MKNLINWFEIPVTDMARAIAFYEQVMQISLRRETMDGADLAVFP
                     YAEPGPGGALIKQDDVAPVAQGVVIYLHTADLLASIERVVLAGGKCVLEPMVPGDDIG
                     TIALFIDSEGNRIGLHQPA"
     gene            complement(4918..5889)
                     /gene="secF"
                     /locus_tag="MOX77_003661"
     CDS             complement(4918..5889)
                     /gene="secF"
                     /locus_tag="MOX77_003661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HCA3359084.1"
                     /translation="MAQEYTVEQLNHGRKVYDFMRWDFWAFGISGLLLIAAIVIMGVR
                     GFNWGLDFTGGTVIEITLEKPAEMDVMREALQKAGYEEPQLQNFGSSHDIMVRMPPTE
                     GETGGQVLGSKVVTIINEATNQNAAVKRIEFVGPSVGADLAQTGAMALLVALISILVY
                     VGFRFEWRLAAGVVIALAHDVIITLGILSLFHIEIDLTIVASLMSVIGYSLNDSIVVS
                     DRIRENFRKIRRGTPYEIFNVSLTQTLHRTLITSGTTLVVILMLYLFGGPVLEGFSLT
                     MLIGVSIGTASSIYVASALALKLGMKREHMLQQKVEKEGADQPSILP"
     gene            complement(5900..7747)
                     /gene="secD"
                     /locus_tag="MOX77_003662"
     CDS             complement(5900..7747)
                     /gene="secD"
                     /locus_tag="MOX77_003662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005125127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HCA3359085.1"
                     /translation="MLNRYPLWKYIMLVVVIIVGLLYALPNLYGEDPAVQITGVRGVA
                     ASEQTLIQVQKTLQEEKIPAKSVALEEGAILARFDTTDTQLRAREALMSVLGDKYVVA
                     LNLAPATPRWLAAIHADPMKLGLDLRGGVHFLMEVDMDTALGKLQEQNIDSLRSDLRE
                     KGIPYTTVRKENNYGLSITFRDSKARDEAIAYLTPRHRDLVISSQSGNQLRAVMTDAR
                     LSEAREYAVQQNINILRNRVNQLGVAEPVVQRQGADRIVVELPGIQDTARAKEILGAT
                     ATLEFRLVNTNVDQAAAAAGRVPGDSEVKQTREGQPVVLYKRVILTGDHITDSTSSQD
                     EYNQPQVNISLDSAGGNIMSNFTKDNIGKPMATLFVEYKDSGKKDANGRAVLVKQEEV
                     INIANIQSRLGNSFRITGISNPNEARQLSLLLRAGALIAPIQIVEERTIGPTLGMQNI
                     KQGLEACLAGLVVSILFMIFFYKKFGLIATSALVANLVLIVGIMSLLPGATLSMPGIA
                     GIVLTLAVAVDANVLINERIKEELSNGRTVQQAINEGYAGAFSSIFDANITTLIKVII
                     LYAVGTGAIKGFAITTGIGVATSMFTAIIGTRAIVNLLYGGKRVTKLSI"
     gene            complement(7775..8107)
                     /gene="yajC"
                     /locus_tag="MOX77_003663"
     CDS             complement(7775..8107)
                     /gene="yajC"
                     /locus_tag="MOX77_003663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000007628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HCA3359086.1"
                     /translation="MSFFISDAVAATGAPAQGSPMSLILMLVVFGLIFYFMILRPQQK
                     RTKEHKKLMDSIAKGDEVLTNGGLVGRVTKVAEAGYIAIALNDTTEVVIKRDFVAAVL
                     PKGTMKAL"
     gene            complement(8130..9257)
                     /gene="tgt"
                     /locus_tag="MOX77_003664"
     CDS             complement(8130..9257)
                     /gene="tgt"
                     /locus_tag="MOX77_003664"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HCA3359087.1"
                     /translation="MKFELDTTDGRARRGRLVFDRGVVETPAFMPVGTYGTVKGMTPE
                     EVEATGAQIILGNTFHLWLRPGQEIMKLHGDLHDFMQWKGPILTDSGGFQVFSLGDIR
                     KITEQGVHFRNPINGDPIFLDPEKSMEIQYDLGSDIVMIFDECTPYPADWDYAKRSME
                     MSLRWAKRSRDRFDSLGNKNALFGIIQGSVYEDLRDISVKGLVEIGFDGYAVGGLAVG
                     EPKADMHRILEHVCPQIPADKPRYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNARNGH
                     LFVTDGVVKIRNAKHKSDISPLDAECDCYTCRNYSRAYLHHLDRCNEILGARLNTIHN
                     LRYYQRLMAGLRKAIEEGKLESFVTEFYQRQGRPVPPLNVD"
     gene            complement(9454..>9722)
                     /locus_tag="MOX77_003665"
     CDS             complement(9454..>9722)
                     /locus_tag="MOX77_003665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="S-adenosylmethionine:tRNA
                     ribosyltransferase-isomerase"
                     /protein_id="HCA3359088.1"
                     /translation="AAKSDLIEPFFGDTQIFIYPGYQYKVIDALITNFHLPESTLIML
                     VSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFITCNPQAISERP"
BASE COUNT         2420 a         2679 c         2366 g         2257 t
ORIGIN      
        1 atggctacag ggttcaagcg tgacataggc ggttgcgcct ttggcttttg cgcccgccat
       61 ccgcagcgca tggacctcgg cgtgcggctc tccggcgcga tggtgataac cttcgccgac
      121 gatgtcgcca ttgttaacaa tgacacagcc gacattaggg ttcgggtgag tggtgaaacg
      181 tccacgctgc gccagtttga gcgctcgcgc catgtaaaac tcatcctgca tggcttagtc
      241 ctgtaggcga gcgatttctt cgccaaagtc tttgatatct tcgaaactgc gatagacgga
      301 ggcaaagcga atatacgcga ctttatcgag ttttttcagc tgctccatga ccaggttgcc
      361 aatcatcttg ctgggaactt cacgctcccc agtggcacgt aattgtgact taatatggtt
      421 caatgccatt tcaacatcat ctgcgctgac gggtcttttt tccagcgctc tcaacatgcc
      481 gctacgcagc ttatcctcat taaagggttc gcgcacatcg ttgcttttta tcacgcgcgg
      541 catgaccagt tcagccactt caaaggtcgt aaagcgttca ttacacacca gacactgccg
      601 acggcggcgc acggacgagc cctcgcctac aagacgagag tcaatgactt tggtatctac
      661 ggcgaaacaa aatgggcaat gcatacggcg tcctgaccag atgatttagg aaatgctatt
      721 ttaccctgaa ctggcgcgac aacaaaggcg gagcgctttt gagataaagg atcggtgcct
      781 ttgtgcgtat agcgcactac cattacgcta tcggaccacg aaggaaatga tcgacatgac
      841 aagatgttac ctaagaattc tcctggtggg aagtctcttg agcctgaccg cctgcgcgcc
      901 gcagagcgaa gttcgccaga tgcatcaaag cattagcacc ctgaataaag agatgaccca
      961 actgaatcag gaaacggtaa aaattaccca acaaaataag ctgaatgcgg attcaacccg
     1021 cggcgtctat ttgttgcctg gcgccaatac gcctgcccgg ctggagagtc agatcggtac
     1081 gctacgtatg acattgctgg aaattacgcc tgtcgctgac ggcgctcacg caacgttacg
     1141 cattcagggc aagtcccgcg atccgctacc ggcattcagc gctaccgtag agtacgggca
     1201 aattcagggc actacggaga actatcagga ggtgaatgcg cagagccttc tggtaaatgc
     1261 gcccgccagc ttgctggcgc ccagtgatgt caatattccg ttaccgttga aggggatcac
     1321 accggcgcag ttaggcttca ttcgcatcca tgatattcag cctgttaatc aataaacgtt
     1381 ctggcggagc gttttgtgcg ctccgcaaca tcctctgcgc aacttttgtt gcccttctga
     1441 catttccgta atttatgaca cggattgtta atattcatga aagatagtac tgtcgccgcg
     1501 cctaaagtgc gcaaacgtga acgcaatcga ttacgtaaat gatagatatg tgaaacaaga
     1561 catatttttg tgagcaatga tttttataat aggctccgca gaaacacgaa atatttagaa
     1621 acgcaaattg cgttcttttc actcccgcaa gggatttcaa acagtggcat acatatgaaa
     1681 aaaactttac tcgcagtcag cgcagcgctg gcgctcacct catcttttac tgctaacgca
     1741 gcagaaaatg atcagccgca gtatttgtcc gactggtggc accagagcgt aaacgtggta
     1801 ggcagctacc atacccgttt ctcgccgaaa ttgaacaacg acgtctatct ggaatatgaa
     1861 gcatttgcca aaaaagactg gtttgatttc tacggctata tcgatattcc caaaaccttt
     1921 gattggggta acggcaacga taaaggtatc tggtccgacg gttctccgct gttcatggaa
     1981 atcgaaccgc gtttctcgat tgataagctg accggcgcag acctgagctt tggcccgttt
     2041 aaagagtggt atttcgccaa caactacatc tacgatatgg gcgataacaa agccagccgc
     2101 cagagcacat ggtatatggg tctggggacc gatatcgaca ccggcctgcc gatgggtctg
     2161 tcgctgaacg tgtatgcgaa atatcagtgg caaaactacg gcgcgtccaa tgaaaacgaa
     2221 tgggacggct accgtttcaa agtgaaatac ttcgtcccca tcaccgatct gtggggcggt
     2281 aaactgagct atatcggctt taccaacttt gactggggat ctgatttagg cgacgatccg
     2341 aaccgtacca gcaactccat cgcttccagc catatcctgg cgctgaacta cgatcactgg
     2401 cactactcgg tcgttgcgcg ttacttccat aacggcggac agtggcagaa tggcgccaaa
     2461 ctgaactggg gcgacggcga tttcagcgcg aaatctaccg gctggggcgg ttacctggtc
     2521 gtgggttaca acttctaaac ctgcaaaaaa gccagaggtc gtcctctggc ccgtttcggg
     2581 cgcatgctgc catgcggcgg cgagtcgcgc ccacttcaca ttacttccgg cgatgccacc
     2641 agcctaaaaa cagacctgtc gcaatcccga ccagcgttgg tgccgccaga tcgtgccaga
     2701 tagtaatgct caactctgtg agcgtcatat tgccgccttt gttgcaatgg caacggttcg
     2761 cggctatcct caacttgtct ggggtcaagt tagcccccgt aatgttgccg gtgaataccg
     2821 aacaatgtgc gggggttttc tctttccagc gacaaggcca ccggggatca agcccccgca
     2881 acattgcgcc tcaccgggtt gccccggctt accgctgatt ctactctgct cgccagtatc
     2941 ggcaggactt aaaaacaaaa aaatcccaac cttgcgatcg gaattccagt gacaatgtat
     3001 gcgttacagg acgtttgggg ctggcgacaa actccggggc tgaaaaaatg tcagattgca
     3061 tccgacctac gaaaaccaat aattcattta tattgcggat tccgttgggt ggagtggagc
     3121 gaagcgtaac ctaacattca acagcaccaa cagctttgtc agcagtctgc ttatttcttt
     3181 ttgttcatca tcgctttcag atcggcaaac gggttataag tcgcctcgcc gacatctttt
     3241 tgcgcatctt ccccggcaat gaccgtcgaa ccgtactgat cggcttcggt atatttagaa
     3301 tgctcatgat cgtggcagta gaggcacaat agctcccagt tactgccgtc ttccgggtta
     3361 ttggtgtggt catgatcgat atgatgcacc gtcagctcac gcagatttga atacacaaac
     3421 tcacgggaac aacgtccgca cacccacgga aacagcttca gcgctttttc acgatagccg
     3481 ctttccaggc gcgcgtagtt ttttgggatg atagccataa ttaacaggta cctgaataat
     3541 acaaagggtt atgcgcagtt tcccgcgaag ccgggctttt agcaatgatt ctgtgcaact
     3601 tatatatcca ggtaaggaag gctatttcag gcaaactgat gaccaatcaa cccgttttac
     3661 aagcgttgga ggtatcgcta tcacatctta cggcattttt tcgtgctcga ctttacgcaa
     3721 aaaatcacgc aaagaacggt cgattgtttc acgaaatcgc cggttaagcg gagtaatttg
     3781 taaacagcga tcgaggcgaa aacaccgata gtcttcccgt ctctcacacc aggcaaccag
     3841 tagccagtgc tctccccaga aaaacaatcc cagaggttgt atatcccgcg aagagagatg
     3901 ccccgcttca tcacgataat gtagcgccaa cacctgctgc gccgaaacag cctgatggat
     3961 aagatcaaac gcgctgcgcg aatgtggaga tgtacccaaa tccggagcgt aaatccgtgt
     4021 ctgctccgct ttacgacggc tctcttccgg taaaatagcc aacacttttt cctgggcgga
     4081 ttcaagctcg cgcgatagcg aatcgccacc ccaggttttc aataaccgta tagccaccat
     4141 cagtgcttcc gattcacgat gggtaagcat caagggcggc agatcaaaac ccgccattaa
     4201 acggtatccg ctccccgctt caccttcgac aggcacaccg gataacgaca gatcgcgaat
     4261 atcgcgataa atcgtccgtt cagaaaccgc aagccgctgt gccaacagcg ctgccgtcgt
     4321 cagtcgtcta ccccgcaaaa tttgcacgat ctgaaacaaa cggtcagcgc gtctggtcat
     4381 attgactctc tacatttagc aaatatcacg caggttgatg taaacctatt cggttacctt
     4441 cgctgtcaat aaacaacgcg atggttccaa tgtcatctcc gggaaccatg ggttccagaa
     4501 cacacttgcc accggcaagg acgacacgtt caatcgaggc taacaaatcg gcggtatgca
     4561 gataaataac gactccctgc gcaactggag cgacatcatc ctgctttatc agcgctccgc
     4621 cgggtccggg ttcagcatac gggaatacgg ccaggtccgc cccatccatg gtttcccgac
     4681 gtaacgatat ctgcatcact tgctcataaa aggcgattgc acgcgccata tcagtaactg
     4741 gaatttcaaa ccagttaatc aagtttttca tacatcctcc tgcgagtgtg ggtaaattca
     4801 tgaggagtgt atgacagggc tcctgacagc atactgtcag taatgtttat cgtcatggta
     4861 cataaataaa aaatcccgat cgcatgaccg ggattcagat aacacttaaa tacgtgttta
     4921 cggcagaatg gacggctgat ccgccccttc tttttcgact ttctgctgca gcatatgctc
     4981 gcgcttcata ccgagtttca gcgccagcgc cgatgcgaca tagatagaag atgccgtacc
     5041 aatagagaca ccgatcagca tcgtcagcga gaagccttcc agtaccggac cgccgaagag
     5101 gtacagcatc agaattacca ctaacgtcgt accggaggta atcaacgtac ggtgtagcgt
     5161 ctgggtcagc gacacgttaa agatttcgta aggcgtcccg cgacggattt tgcggaagtt
     5221 ttcacgaata cggtcggaga ccacgatact gtcgttcagc gagtaaccga tcaccgacat
     5281 caacgatgcc acaatggtca ggtcaatctc aatatggaaa agcgacagta tccccagcgt
     5341 aatgatcacg tcgtgcgcca gcgcgatgac cacccctgcc gccagtcgcc actcaaagcg
     5401 gaaaccgaca taaacgagga tagagatcaa cgccaccagc agcgccatgg cgccggtttg
     5461 cgccagatcg gcgcccacgc ttggccccac gaattcaata cgcttcacgg ccgcgttctg
     5521 gttggtggct tcattaatga tcgtcaccac tttgctaccc agtacctgac cgccggtttc
     5581 accttcggtt ggcggcatac gcaccataat gtcgtgactg ctgccaaagt tctgcaactg
     5641 cggctcttca tagcccgctt tttgcagcgc ttcgcgcatc acgtccattt cagccggttt
     5701 ttccagcgtg atttcaatta ccgtaccacc ggtgaaatcc agcccccagt taaacccgcg
     5761 tacgcccata atgacaatgg ccgcgatcag caacagcccg gagatgccga atgcccagaa
     5821 gtcccagcgc ataaagtcat agactttacg gccgtggttt agttgttcaa cagtgtattc
     5881 ctgtgccaca tcgcactcct cagattgaca gcttagtgac gcgcttgccg ccatatagca
     5941 ggtttacgat agcacgcgta ccgataatcg cggtaaacat cgacgtcgcc acaccgatac
     6001 cggtcgtaat cgcgaaccct ttaattgccc cggtaccgac agcatacaga atgatgactt
     6061 taatcagcgt cgtgatgttc gcatcgaaga tggaactgaa cgcgccggca tagccttcgt
     6121 ttatcgcctg ctgtaccgtg cggccattac tcaactcttc tttgatacgt tcgttaatca
     6181 gaacgttggc gtcgaccgcc accgcaaggg ttaacacgat acccgcaatc cccggcatac
     6241 tgagcgttgc ccccggcaac agcgacatga taccgacaat caacaccagg ttagccacta
     6301 acgcgctggt cgcaatcaga ccaaacttct tatagaagaa gatcatgaac aggatggaga
     6361 ccaccagacc ggccagacag gcttccaggc cctgcttgat gttctgcata cccagagtcg
     6421 ggccaatggt gcgctcttca acgatctgaa tcggcgcaat cagggcaccc gcacgcagca
     6481 acaacgagag ctgacgcgct tcgttcgggt tgctgatacc ggtaatacgg aagctgttac
     6541 ccagccgaga ctggatgttg gcaatgttaa tcacctcttc ctgtttcacc agtacggcgc
     6601 gaccgttagc gtctttctta ccgctgtctt tatactccac aaacagggtc gccatcggtt
     6661 tgccgatatt gtccttagtg aagttagaca tgatattgcc gcctgcgcta tccagcgaga
     6721 tgttaacctg cggttggtta tattcatcct ggctggacgt cgagtcggtg atatggtcgc
     6781 cggtgaggat cacgcgtttg tacaatacca ccggctgacc ttcgcgggtc tgtttcactt
     6841 cggaatcgcc cggtacgcgc ccggcagcag cggcggcctg gtcaacgttg gtattcacca
     6901 gacggaattc cagcgtcgcg gtcgcgccga gaatttcttt cgcgcgagcg gtatcctgga
     6961 tacccggcag ctcaaccaca atacggtctg cgccctggcg ttgtacgaca ggctccgcga
     7021 cgcccagttg gttaacacgg ttacgcagaa tattaatgtt ctgctgaacg gcgtattcac
     7081 gcgcttcgct caggcgcgca tcggtcatta ccgcgcgaag ttgattgccg ctctggctgg
     7141 aaatcaccag gtcacgatga cgcggcgtca gataggcgat cgcctcatca cgcgctttgc
     7201 tgtcacggaa cgtgatgctc agcccataat tattttcttt acgaacggtg gtataaggaa
     7261 tgcctttttc acgcagatcg ctgcgcaggc tatcgatatt ttgttcctgg agtttaccta
     7321 acgcggtatc catatccact tccatcagga agtgaacgcc gccgcgcaga tcaagaccga
     7381 gcttcatcgg atcggcgtga atagccgcca accagcgcgg cgtagccggc gcaaggttaa
     7441 gcgccacgac atatttatcc cccagcacgc tcatcagcgc ttcacgggcg cgtagctggg
     7501 tatcggtggt gtcgaagcgc gcaagaatag cgccctcttc cagtgccaca gacttagcgg
     7561 gaattttttc ttcttgtaac gttttctgga cctggatcag cgtttgctca ctggcggcga
     7621 cgccgcgcac gccagtgatt tgaacagccg gatcctcacc atacaggttg ggaagtgcgt
     7681 aaagcaggcc gacgataatc acgacgacca gcatgatgta cttccacaaa ggataacggt
     7741 ttaacacggc agttcccttt gggaaaacga aatattacag cgccttcatg gtgcctttcg
     7801 gcagaacggc agctacgaag tcacgtttga taaccacttc cgtggtgtca ttcagcgcga
     7861 tggcaatgta gccggcttcc gctactttgg tcactcgacc aaccagaccg ccattcgtca
     7921 gaacttcatc acctttcgca atggagtcca tcagcttttt gtgctctttg gtgcgcttct
     7981 gctgcgggcg caggatcatg aaatagaaaa tcagaccaaa caccaccagc attaaaatca
     8041 gagacatcgg gctgccctgc gccggagcac ctgttgccgc taccgcatca gaaataaaaa
     8101 agctcattca aattccctca ttattaaaat taatcaacgt tcaaaggtgg aacgggtcgc
     8161 ccctgacgtt ggtaaaactc ggttacgaag ctctctaatt taccctcttc aatagccttg
     8221 cgtaaacccg ccatcaaacg ctggtagtaa cgcaagttat gaatggtatt gagacgcgca
     8281 cctaatattt cgttgcaacg gtcgagatga tgcaagtaag cgcgtgaata attgcgacag
     8341 gtgtagcaat cgcactcggc gtcaagcggg ctgatgtcgc ttttatgctt tgcattacga
     8401 atcttcacca cgccgtcggt cacaaacaga tgaccattac gggcatttcg cgttggcatg
     8461 acacagtcaa acatatcaat accgcgacgc accccttcca ccagatcttc cggtttaccc
     8521 acgcccatca ggtaacgcgg tttgtcagcc gggatctgcg ggcaaacgtg ctccagaatg
     8581 cggtgcatat ctgctttcgg ctcaccgaca gccaaaccgc cgacagcgta gccatcaaag
     8641 ccaatctcta ccagaccttt caccgagata tcgcgtaaat cttcgtaaac gctgccctga
     8701 atgatgccaa aaagcgcatt cttattgcca aggctatcaa aacggtcgcg gctacgcttc
     8761 gcccaacgca acgacatctc catcgagcgt ttagcatagt cccagtctgc cgggtacggc
     8821 gtacattcat caaagatcat cacgatatcg gaaccgagat cgtactggat ctccatcgac
     8881 ttttccggat cgaggaaaat cggatcgccg ttgatcgggt tacggaagtg cacgccttgc
     8941 tcggtaatct tacgaatatc gccgaggctg aagacctgga agccgccgga atcggtgaga
     9001 atcggccctt tccactgcat gaaatcgtgc aggtcgccgt gcagcttcat gatttcctga
     9061 cccgggcgca gccacaggtg gaaagtgttg ccgagaataa tctgcgcgcc ggtcgcttcc
     9121 acttcttccg gcgtcatgcc ttttaccgta ccgtaagtac ccacaggcat aaaagcaggc
     9181 gtttccacta cgccacgatc aaacaccaga cgaccgcgac gcgcgcgacc atcggtggta
     9241 tctaactcaa atttcattat cactcctgcg tcagaaaaac agtccgacgt ttaacgactc
     9301 gctacggaat gattccatag ctaataaatt cccgaaggcg tcatcggcgc agccagtttg
     9361 gagtcggcca gcgcacaacc accggagcgt acacgcagta cgtgaggatg gcgagcactg
     9421 cccggcgtca aaatggcaag tgagatagcc ttcttacgga cgctcagaaa tagcctgcgg
     9481 attgcacgtg ataaacatcg cgtccccgta gctaaaaaag cgatattttt gttctaccgc
     9541 agtcttatag gcattcatgg tgtgttgata accggcaaat gcggaaacca gcataatcaa
     9601 cgtcgattcc ggcagatgga agttggtgat cagcgcatca atcactttgt attgataacc
     9661 tggataaata aagatttgcg tatcgccgaa gaatggctct atcaaatcgc tttttgccgc
     9721 ct
//
LOCUS       DAGWFR010000154         9714 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.156, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000154 DAGWFR010000000
VERSION     DAGWFR010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 9714)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9714)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9714
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.156"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            74..2920
                     /gene="rcsC"
                     /locus_tag="MOX77_003666"
     CDS             74..2920
                     /gene="rcsC"
                     /locus_tag="MOX77_003666"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     RcsC"
                     /protein_id="HCA3359089.1"
                     /translation="MKYLASFRTTLKVSRYLFRALALLIWLLIAFVSVFYIVNALHQR
                     ESEIRQEFNLSSDQAQRFIQRTSDVMKELKYIAENRLTAENGVMSSRARDDKMVVPDF
                     EPLFADSDCAAMGSAWRGSLESLAWFMRYWRDNFSAAYDLNRVFLIGSDNLCMANFGL
                     REMPVERDDALKALHERIMKYRNAPQEESGNNLFWISQGARQGVGYFYALTPVYLANR
                     LQALLGVEQSIRMENFFTPGSLPMGVTIIDENGHSLISLTGPDGIIKAEPRWMQERSW
                     FGYTPGFRELVLKKSLPPSSLSIVYSVPVDLVLERIRILILNAILLNVLVGAGLFTLA
                     RMYERRIFIPAESDAQRLEEHEQFNRKIVASAPVGICILRTIDGVNILSNELAHTYLN
                     MLTHEDRQRLTQIICGQQVNFVDVLTSNNTNLQISFVHSRYRNENVAICVLVDVSTRV
                     KMEESLQEMAQAAEQASQSKSMFLATVSHELRTPLYGIIGNLDLLQTKELPKGVDRLV
                     TAMNNSSSLLLKIISDILDFSKIESEQLKIEPREFSPREVMNHITANYLPLVVRKQLG
                     LYCFIEPDVPVSLNGDPMRLQQVISNLLSNAIKFTDIGCIVLHVRCDGDYLSIRVRDT
                     GVGIPAKEVVRLFDPFFQVGTGVQRNFQGTGLGLAICEKLISMMDGDISVDSEPGMGS
                     QFTLRIPLYGAQYPVKKSVEGLAGTCCWLAVRNTSLCQFIETSLARSGVHTQRYEGQE
                     PAADDILIVDDALEHTWQGRAAVVFCRRHIGIPLERAPGEWVHSVASVHELPALLARI
                     YSIELDSEALSSALPTTDKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTAND
                     GVDALNVLSKNAIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRC
                     LESGMDSCLSKPVTLDALKQTLAVYAERVRKTRA"
     gene            complement(3023..3673)
                     /gene="rcsB"
                     /locus_tag="MOX77_003667"
     CDS             complement(3023..3673)
                     /gene="rcsB"
                     /locus_tag="MOX77_003667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator RcsB"
                     /protein_id="HCA3359090.1"
                     /translation="MNNMNIIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINN
                     LPKLDAHVLITDLSMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLD
                     IEGIVLKQGAPTDLPKALAALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLR
                     LFAEGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPTDKE"
     gene            complement(3690..6359)
                     /gene="rcsD"
                     /locus_tag="MOX77_003668"
     CDS             complement(3690..6359)
                     /gene="rcsD"
                     /locus_tag="MOX77_003668"
                     /EC_number="2.7.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase RcsD"
                     /protein_id="HCA3359091.1"
                     /translation="MSQSDTTVSTRFSLLPGSITRFFLLLIIVLLVTMGVMVQSAVNA
                     WLKDKSYQIVDITHAIHKRVDTWRYVTWQIYDNIAATTTPSTGEGLQETRLKQDVYYL
                     EKPRRKTEALIFGSHDSATLEMTQRMSTYLDTLWGAENVPWSMYYLNGQDNSLILIST
                     LPLKDLSSGFKESTIGNIVDSRRAEMLQQANALDERESFSSLRKLAWQNGHYFTLRTT
                     FNQPGHLATVVAFDLPINDLIPPGMPLDSFRIEPDATQTTGRSSEKEAPDSVTISFNG
                     SKIEISSALNSTGMRLIWQVPFGTLLLDTLQNILLPLLLNIGLLALALFGYATFRHQP
                     GRSTESTSGNAANNELRVLRAINEEIVSLLPLGLLVYDQEGNRTVISNKIADHLLPHL
                     NLQNITSMAEQHQGVIQATINNELYEIRLFRSQIAPRTQIFIIRDQDREVLVNKKLKQ
                     AQRLYEKNQQGRAAFMQNISNTLKEPVRQLAVNAAAVTTPESLKLADQADVLVRMIDE
                     IQLANMLENDAWKSEATLFSLQDLIDEVVPEVLPAIKRKGLQLLINNHLSGNDERWGD
                     RDALRRILLLLIQYAVTTTAMGKITLEVEQDESIAERLTFRILDTGEGVTLNEIDNLH
                     FPYMNETQGDRYGKANPLTFWLCNQLARKLGGHLNIKARETLGTRYTVHVKMLPHDQH
                     TQVEERLLDDVSVMVDVTSNEVRAIVLRQLENWGATCITPDERQISQEYDLFLTDNPS
                     NLTASGLLLSDDESGVRKIGPGQLRVNFNMSNAMQEAVLQLIEEQLAQEEIPASPLGG
                     DENAELHASGYYALFVDTVPDDVKRLYTEAATSDFAALAQTAHRLKGVFAMLNLVPGK
                     QLCVTLEHLIREKDAPGIEKYISDIDAYVKSLL"
     gene            7087..8223
                     /locus_tag="MOX77_003669"
     CDS             7087..8223
                     /locus_tag="MOX77_003669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin OmpC"
                     /protein_id="HCA3359092.1"
                     /translation="MKVKVLSLLVPALLVAGAANAAEIYNKDGNKLDLFGKVDGLHYF
                     SDDKGSDGDQTYMRIGFKGETQVNDQLTGYGQWEYQIQGNQTEGSNDSWTRVAFAGLK
                     FADAGSFDYGRNYGVTYDVTSWTDVLPEFGGDTYGADNFMQQRGNGYATYRNTDFFGL
                     VDGLDFALQYQGKNGSVSGENTNGRSLLNQNGDGYGGSLTYAIGEGFSVGGAITTSKR
                     TADQNNTANARLYGNGDRATVYTGGLKYDANNIYLAAQYSQTYNATRFGTSNGSNPST
                     SYGFANKAQNFEVVAQYQFDFGLRPSVAYLQSKGKDISNGYGASYGDQDIVKYVDVGA
                     TYYFNKNMSTYVDYKINLLDKNDFTRDAGINTDDIVALGLVYQF"
     gene            8338..9390
                     /gene="apbE"
                     /locus_tag="MOX77_003670"
     CDS             8338..9390
                     /gene="apbE"
                     /locus_tag="MOX77_003670"
                     /EC_number="2.7.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase ApbE"
                     /protein_id="HCA3359093.1"
                     /translation="MKMTFCRAVCLAAAFLLMGCDEAPETTTASPAAQVLEGKTMGTL
                     WRVSVVGIDAKRAAELQTKIQTQLDADDWLLSTYKNDSALMRFNHSRSLAPWPVSEAM
                     ADIVTSALRIGAKTDGAMDITVGPLVNLWGFGPDRQPLHIPTPAQIDAAKAKTGLQHL
                     QVIDRAGHQFLQKDLPDLYVDLSTVGEGYAADHLARLMEQEGIARYLVSVGGALSSRG
                     MNAQGLPWRVAIQKPTDRENAVQAIVDINGHGISTSGSYRNYYELDGKRVSHVIDPQT
                     GRPIEHNLVSVTVIAPTALEADGWDTGLMVLGTQKAQEVVRREGLAVFMIMKEGEGFK
                     TWMSPQFKTFLVSDKN"
     gene            9471..>9714
                     /locus_tag="MOX77_003671"
     CDS             9471..>9714
                     /locus_tag="MOX77_003671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461208.1"
                     /note="regulates genes involved in the repair of alkylated
                     DNA; repairs DNA containing 6-O-methylguanine; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional transcriptional activator/DNA
                     repair enzyme protein Ada"
                     /protein_id="HCA3359094.1"
                     /translation="MMKKALLTDDECWLRVQARDASADGRFVFAVRTTGVFCRPSCRS
                     KRALRKNVRFFANAQQALDAGFRPCKRCQPDNARAQQ"
BASE COUNT         2282 a         2376 c         2638 g         2418 t
ORIGIN      
        1 ccgttgcggg ctacgtcatt taccgctacc ttagtcacac tctatttaca tcctgaggcg
       61 gagcttcgcc cctttgaaat accttgcttc ctttcgaact acgctgaaag tctcgcgcta
      121 cttattcaga gcgttagcgt tactcatttg gctcttaatc gcctttgttt cggtgtttta
      181 catcgtcaat gccctgcacc agcgggagtc tgaaattcgt caggagttca accttagctc
      241 cgatcaggcg cagcgtttta tccagcgcac gtcggatgtg atgaaagagc tcaaatatat
      301 cgccgagaac cgtttaacgg cggaaaacgg cgtcatgtcg tcgcgtgcgc gtgatgacaa
      361 aatggtggtg ccggattttg aaccgctatt cgccgactca gactgtgcgg cgatgggctc
      421 cgcctggcgc ggctcgctgg agtcgctggc ctggtttatg cgttactggc gcgacaactt
      481 ttcagcggcg tatgatctta accgcgtttt cctgattggc agcgataacc tctgtatggc
      541 gaatttcggc ctgcgtgaaa tgcccgtgga gcgcgatgat gcgttaaaag cgttacatga
      601 gcggattatg aaataccgca acgcgccgca ggaagaaagt gggaataacc ttttctggat
      661 aagccagggc gcgcgtcagg gcgtgggcta cttttatgcg ctgacgccgg tgtatctggc
      721 caatcgtctg caggcgctgc tgggcgttga gcagtccatc cgtatggaaa attttttcac
      781 gcccggcagt ttgccgatgg gcgtcactat tattgatgag aacggccatt cgctgatttc
      841 gttgaccggt cctgacggca ttattaaagc ggagccgcgc tggatgcagg agcgttcctg
      901 gtttggttat acgccaggtt ttcgcgaact ggtactcaaa aaaagcctgc cgccatcctc
      961 gctcagtatt gtctattctg tgcctgtaga tttagtcctg gagcgtattc gtattcttat
     1021 cctgaacgct atcctgctga acgtgctggt gggcgcaggg ctgtttacgc ttgcgcggat
     1081 gtatgagcgg cgaattttca ttccggcgga gagcgatgcc cagcgtctgg aagaacatga
     1141 acagttcaac cgtaaaatcg ttgcctccgc gccggtgggg atctgtattc tgcgcactat
     1201 tgatggtgtc aatattctga gtaacgaact ggcgcacacc tacctgaaca tgctcacgca
     1261 tgaagacaga cagcgcctga cgcaaatcat ttgcggccag caggtcaact ttgttgatgt
     1321 attgaccagc aataatacca atttgcaaat tagcttcgtc cattcccgct atcgtaatga
     1381 aaacgtcgcg atttgcgtgt tggtagatgt gagtacgcgc gtcaaaatgg aagagtcgct
     1441 gcaagagatg gcgcaggcgg cggagcaggc aagccagtct aaatccatgt tccttgcaac
     1501 ggtcagccat gaattgcgca caccgctgta cggtatcatc ggcaatctcg atctgctgca
     1561 aaccaaagag ctgccaaaag gcgtggatcg tctggtcacg gcgatgaata actcctccag
     1621 tctgttgctg aaaattatca gcgacattct cgacttctcg aaaattgagt cggaacagct
     1681 aaagattgag ccgcgcgaat tttcaccgcg agaggtgatg aaccatatca ccgccaatta
     1741 tctgccgctg gtggtgcgta agcaactcgg cctgtattgt tttattgagc ctgacgtgcc
     1801 ggtatcgctg aacggcgacc cgatgcgttt acagcaggtt atttcaaacc tgttgagcaa
     1861 cgccattaag tttaccgata ttggctgcat cgtgctgcat gtgcgctgtg atggggatta
     1921 tctcagcatt cgcgtgcggg ataccggggt tggtattccg gcaaaagagg tggttcgcct
     1981 gttcgatccc ttcttccagg tgggaaccgg cgtacagcgt aactttcagg ggaccggtct
     2041 ggggctggcg atttgcgaaa aattgatcag catgatggac ggcgatattt ccgtcgattc
     2101 ggagccgggc atgggaagcc agtttacgtt gcgcatcccg ctttatggcg cgcaataccc
     2161 tgtgaaaaag agcgtggaag gactcgccgg aacctgctgt tggctggcgg tgcgcaatac
     2221 ttctttgtgc cagtttattg agaccagtct ggcgcgtagc ggcgttcata cgcagcgtta
     2281 tgaagggcaa gaacccgccg cagacgatat tttgattgtc gatgacgcgc tggagcatac
     2341 ctggcagggg agggcggcgg tcgtcttttg ccgccgtcat atcgggattc cattggaaag
     2401 agcgcctggc gagtgggtgc atagtgtggc gtcggtgcat gagttgcccg cgctgttggc
     2461 gcgtatctat agtattgagc tggatagtga agcgctttcc agcgcattgc cgacgacgga
     2521 taaaaccgca gattcaaatg acgacatgat gattctggtc gttgacgatc atccgatcaa
     2581 tcgccgcttg ctggccgatc aactgggatc gctggggtat cagtgtaaga cagccaatga
     2641 tggcgtggac gctctgaatg tgctgagtaa aaatgctatc gatattgttc tgagcgatgt
     2701 gaacatgccg aacatggacg gctatcgcct gacgcagcgt atccgtcagc ttgggctgac
     2761 gctgccggtc gtcggcgtga cggcgaacgc gctggcggaa gagaaacaac gttgcctgga
     2821 gtccggtatg gatagctgtt tgtcgaagcc tgtgacgctg gatgcgttga aacagacgct
     2881 ggcggtgtat gccgagcggg tacgtaaaac gcgggcataa aaaatgccgg atggcggcgt
     2941 cgcctgtccg gcctgtaaaa gatgagtcga ctggtaggcc tgataagcgt agcgccatca
     3001 ggctgggtaa cataaaagcg atttattctt tgtctgtcgg actcagggtg acggaagaga
     3061 gatagttgag cagcgcgata tcattctcta cgcccagttt catcatcgcc gatttcttct
     3121 ggctgctgat ggtcttaatg ctgcggttga gcttcttggc gatttcggtg accaggaagc
     3181 cctcggcgaa caggcgtaat acttcgctct cttttggcga caggcgctta tcgccgtaac
     3241 cgcctgcgct gattttctcc agcagacgag aaacgctttc cggggtgaat tttttgcctt
     3301 tttgcagcgc ggccagcgcc ttaggcagat cggttggcgc accctgtttg agtacgatcc
     3361 cttcaatatc aagatccaac acggcgctca ggatcgccgg attgttgttc atggtcagaa
     3421 cgataataga caggctcgga aaatgacgct tgatgtactt gatcaaggtg atcccatcgc
     3481 cgtatttatc tcccggcatg gagaggtcag tgatcaacac atgcgcatct aatttcggca
     3541 ggttgttgat caatgctgtg gaatcttcaa attcgccgac aacattcacc cactcgattt
     3601 gttcaagtga tttgcgaata ccgaacagta caatcgggtg gtcatcggca ataattatgt
     3661 tcatattgtt catgtattgg gctactttgc tacagcaagc ttttgacgta ggcgtcaatg
     3721 tcgctgatat atttttctat acctggagca tctttctcac gaatcagatg ttccagcgtt
     3781 acacataact gcttgccggg taccagatta agcatggcaa acaccccttt caggcggtgg
     3841 gccgtttggg ccagcgcagc gaaatcgctg gttgccgcct cagtatacaa cctcttaaca
     3901 tcatccggta ctgtgtctac aaatagcgca taatagccgc tggcatgaag ctcggcattt
     3961 tcatctccgc cgagcgggga ggcgggaatc tcttcctgcg ccagctgctc ttcgataagt
     4021 tgtagtacag cttcctgcat agcattgctc atattaaagt tgacgcgcaa ctgacccggg
     4081 ccaattttcc gcacgcctga ctcatcatcg cttaaaagca agcccgaggc agtaagatta
     4141 gacggattat ccgttaaaaa gagatcatat tcttgactta tctgcctttc atccggcgtg
     4201 atgcaggtgg cgccccagtt ttctaactga cgcagcacaa tcgcgcgaac ctcgttggac
     4261 gtcacatcga ccatcacgct cacgtcgtcc agcaggcgct cttcgacctg agtatgctga
     4321 tcgtgaggaa gcattttgac atgaacggta tagcgcgtgc ccagcgtttc tcgcgcttta
     4381 atgttgagat gaccgcccag tttgcgcgcc agttgattgc acagccagaa ggtgagcgga
     4441 ttcgctttgc cgtaacggtc gccctgcgtt tcattcatat acgggaaatg cagattatca
     4501 atctcgttta acgttacgcc ttcgcccgta tccagaatac ggaaagtcag acgctccgcg
     4561 atagattcat cctgctcgac ttcaagcgta attttaccca tagcggtcgt cgtgacggca
     4621 tactgaatca acagcagcaa aatccggcgc agggcgtcgc gatcgcccca gcgttcatcg
     4681 ttgccgctaa gatggttatt aatcagcagt tgcagccctt tacgcttaat ggcgggcagc
     4741 acttccggca cgacttcgtc aataagatcc tgcagggaga acagcgtggc ttcgcttttc
     4801 catgcgtcat tttccagcat attcgccagt tggatttcat cgatcatacg tactaataca
     4861 tccgcctgat ccgccagttt caggctttcc ggcgtggtga ctgccgcggc gttaaccgcc
     4921 agttggcgta cgggctcttt aagcgtgttg ctgatatttt gcataaaggc ggcgcggccc
     4981 tgctgattct tctcatacaa acgctgcgcc tgtttaagct tcttattcac cagcacttcc
     5041 cggtcctgat cgcgaataat aaagatctgc gtgcgggggg cgatctggct gcgaaacaga
     5101 cggatctcat acagttcgtt attaattgtc gcctgaatca cgccctgatg ctgctccgcc
     5161 atgctggtaa tattttgcag gttaagatgc ggcaacagat gatcggcgat tttattgctg
     5221 atcacggtgc ggttgccttc ctgatcgtag accagcagac ccagcggcag cagagaaacg
     5281 atctcttcat taatggcgcg taagacgcga agctcattat tcgccgcgtt gccggatgtc
     5341 gattccgtcg accgtcccgg ctgatgacgg aacgtggcgt agccaaataa cgccaacgcc
     5401 agcagcccga tgttcagcag taaaggcagc aaaatatttt gcaacgtatc aagcaaaagc
     5461 gtaccgaacg gtacctgcca gatcaggcgc attccggtag agttaagcgc tgaggagatc
     5521 tcaatttttg aaccgttaaa gctaatcgtg acgctatctg gcgcttcctt ttcactgctt
     5581 cgccccgtcg tctgggttgc gtcaggctct atccgaaaac tgtccagcgg cattcccggc
     5641 gggattaaat cattaatggg cagatcaaac gccaccacgg ttgccagatg tcctggctga
     5701 ttgaaggtcg tgcgcagcgt aaaatagtga ccgttttgcc aggccagttt tcgcaatgag
     5761 gagaaacttt cgcgctcatc cagcgcattc gcctgctgca acatctctgc ccggcgggaa
     5821 tcgacgatat tgccaatagt ggactcttta aagccggaag agagatcttt caacggtagg
     5881 gtagagataa gaatcaggct gttatcctgt ccgttgaggt aatacattga ccacggcacg
     5941 ttttccgcgc cccacagcgt atccagataa gttgacatac gctgcgtcat ttccagcgtg
     6001 gcgctgtcat gggaaccgaa aatcagcgct tcagttttac gtcgcggctt ttcaagataa
     6061 tacacatcct gtttcagacg cgtttcctga agtccttcac ctgtcgatgg cgtagtggtc
     6121 gcggcgatgt tgtcataaat ttgccaggta acataccgcc aggtgtccac gcgtttatga
     6181 atagcgtgag tgatatcgac aatttgatag cttttgtctt tcaaccaggc gttgacggcg
     6241 ctctgtacca taacgcccat cgttaccagc agcacaatga tcagcaataa gaagaaacgg
     6301 gtaatgcttc ccggtagaag ggagaatcgg gtagagaccg ttgtgtcaga ctgactcatt
     6361 tatgtttacg acctgtaaaa gcaacgctga aggtgaaggg cagtataaag ggtaatgaat
     6421 gaatttccag actcttacgt catgccgggc aacttaacac gcgctccgtc ggcgggacgg
     6481 gaaaagcgta caaccttcgc aaaacggtac aaatataaag actacttata aatgtttagc
     6541 actaaatatc aagaaattat ttgctaatgt cttatgaacg gtcgagcagg ggagggtagt
     6601 gaataaccgt gatagtttta ggcaggtagc ataaatcagc cgggtgtgtc tgaaaaaggg
     6661 taaaaaaacc gaatgcgaag catccggttg aaataggggt aaacagacat tcagaagtga
     6721 atgacggtaa taaataaagt taatgatgat agcggtcact attttagttg cgaatgaaga
     6781 ttctgtttta tcattcagtg ctatgaattt catcaattta acccgttgat tttaaaagtt
     6841 tcgtgaatat attttgtcta tttgtgctta tttttacttg atttttgctt taaaaaagtt
     6901 ccgtaaaatt catattttga aacatctata tagataactg taacatctta aaagttttag
     6961 tatcatattc gtgttggatt attctgtatt tttgcggaga atggacttgc cgactggtta
     7021 atgagggtta accagtaagc agtggcataa aaaagcaata aaggcatata acagagggtt
     7081 aataacatga aagttaaagt actgtccctc ctggtaccag ctctgctggt ggcgggcgca
     7141 gcgaatgcgg ctgaaattta taataaagac ggcaacaaat tagacctgtt tggtaaagtt
     7201 gatggcctgc actacttctc tgacgacaaa ggcagcgacg gcgaccagac ctacatgcgt
     7261 atcggcttca aaggcgaaac gcaggttaac gatcagctga ccggttatgg ccagtgggaa
     7321 tatcagattc agggcaacca gactgaaggc agcaacgact cctggacgcg tgtggcgttt
     7381 gcgggtctga aattcgctga cgcaggttcc ttcgattatg gtcgtaacta cggcgtaacc
     7441 tatgacgtga cctcctggac cgacgttctg ccggagttcg gcggcgacac ctacggcgct
     7501 gacaacttta tgcagcagcg tggtaacggc tatgctacct accgtaacac cgacttcttc
     7561 ggtctggtgg atggtctgga cttcgcgttg cagtatcagg gcaaaaacgg cagcgtgagc
     7621 ggtgaaaaca ccaacggtcg cagcctgctg aaccagaacg gcgacggtta cggcggatcg
     7681 ctgacttatg caatcggcga aggcttctct gtcggtggcg ctatcaccac gtctaaacgt
     7741 actgccgatc agaacaacac cgctaacgct cgcctgtatg gtaacggcga tcgcgccacg
     7801 gtttacaccg gcggcctgaa atacgatgcg aacaacatct atctggcagc gcagtattct
     7861 cagacctata acgcaacccg ttttggtacc tctaacggca gcaacccgtc cacctcttac
     7921 ggttttgcca acaaagcgca gaactttgaa gtggttgctc agtaccagtt cgactttggt
     7981 ctgcgtccgt ctgtggctta cctgcagtct aaaggtaagg acatcagcaa cggctacggc
     8041 gccagctatg gcgaccagga catcgtaaaa tacgttgatg tcggcgcgac ttactacttc
     8101 aacaaaaaca tgtccaccta tgttgattac aaaatcaacc tgctggataa aaacgacttt
     8161 acccgcgatg cgggcatcaa caccgacgac atcgtagcgc tgggtctggt ttaccagttc
     8221 taatcagcaa aagatgttgc taaagggcct gcgggccctt ttttcatgcc ttattccggc
     8281 gtacaaatac gacgttttga tatacgcttg cgtccattcg aatgaggata aacagcgatg
     8341 aaaatgactt tttgccgggc cgtgtgtctg gcagcggctt ttttacttat gggctgcgat
     8401 gaggctcccg aaacgacaac agcgtcacct gccgctcagg tgctggaagg taaaacgatg
     8461 ggaaccctct ggcgggtgag cgtggttggt atcgatgcga aacgtgccgc agagttacag
     8521 actaaaatcc agactcagct tgatgctgat gattggttgc tttctaccta taaaaatgac
     8581 tccgcgctga tgcgttttaa ccattcacgc agtcttgcgc cctggccggt cagcgaagcc
     8641 atggcggata tcgtgacctc ggcgctgcgt attggcgcga agacggacgg cgcgatggat
     8701 atcaccgtgg gcccgctggt caatctgtgg gggtttggac cggatcggca gccgctgcat
     8761 atcccaacac cagcacaaat cgatgcggca aaagcgaaaa caggcctgca acatttgcag
     8821 gttatcgaca gggctggaca tcagtttttg caaaaagatc tgccggatct ttatgttgat
     8881 ctctccacgg tcggggaggg ctatgcggcg gatcatctgg cgcgtctgat ggagcaggag
     8941 ggcattgcgc gttatctggt ctcggtgggc ggcgcattaa gcagtcgcgg gatgaatgcg
     9001 caggggctgc cgtggcgcgt cgcgattcag aagccgaccg accgggaaaa cgcggtgcag
     9061 gcgattgtgg atatcaacgg gcatggcatc agcacctccg gcagctaccg taactattac
     9121 gagctggatg gcaagcgcgt atcgcacgtt atcgatccgc aaacggggcg ccccattgaa
     9181 cacaatctgg tatcggttac ggtcatcgcg ccaacggcgc tggaagcgga cggctgggac
     9241 accggcctga tggtgctcgg tacgcaaaag gcgcaagagg tcgtgcggcg ggaagggctg
     9301 gcggtcttta tgatcatgaa agaaggtgaa ggctttaaaa cctggatgtc gccgcagttc
     9361 aaaacattcc tggtgagcga taagaattaa aacgcaagat tacgggtttt tgtgggcgga
     9421 tttacggaca cactgcatgt aagcaagcac tatgcttaat gaaggagtct atgatgaaaa
     9481 aagcgttact taccgatgat gaatgctggc tgcgggtgca ggcgcgcgat gccagcgcgg
     9541 atgggcgttt cgtttttgca gtgcgaacca ctggcgtttt ttgccgccct tcttgtcgct
     9601 cgaagcgggc gttacgtaaa aatgttcgct tttttgccaa cgcgcagcag gcgctggacg
     9661 ccggttttcg cccctgcaag cgctgtcagc cggataatgc gcgcgcgcag caac
//
LOCUS       DAGWFR010000155         9677 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.157, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000155 DAGWFR010000000
VERSION     DAGWFR010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 9677)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9677)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9677
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.157"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..299)
                     /gene="tuf"
                     /locus_tag="MOX77_003672"
     CDS             complement(<1..299)
                     /gene="tuf"
                     /locus_tag="MOX77_003672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312217.1"
                     /note="EF-Tu; promotes GTP-dependent binding of
                     aminoacyl-tRNA to the A-site of ribosomes during protein
                     biosynthesis; when the tRNA anticodon matches the mRNA
                     codon, GTP hydrolysis results; the inactive EF-Tu-GDP
                     leaves the ribosome and release of GDP is promoted by
                     elongation factor Ts; many prokaryotes have two copies of
                     the gene encoding EF-Tu; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HCA3359095.1"
                     /translation="MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAA
                     RAFDQIDNAPEEKARGITINTSHVEYDTPTRHYAHVDCPGHADYVKNMITGAAQM"
     gene            complement(371..2485)
                     /gene="fusA"
                     /locus_tag="MOX77_003673"
     CDS             complement(371..2485)
                     /gene="fusA"
                     /locus_tag="MOX77_003673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020455498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HCA3359096.1"
                     /translation="MARTTPIARYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVH
                     DGAATMDWMEQEQERGITITSAATTAFWSGMAKQYEPHRINIIDTPGHVDFTIEVERS
                     MRVLDGAVMVYCAVGGVQPQSETVWRQANKYKVPRIAFVNKMDRMGANFLKVVGQIKT
                     RLGANPVPLQLAIGAEEGFTGVVDLVKMKAINWNDADQGVTFEYEDIPADMQDLANEW
                     HQNLIESAAEASEELMEKYLGGEELTEEEIKQALRQRVLNNEIILVTCGSAFKNKGVQ
                     AMLDAVIDYLPSPVDVPAINGILDDGKDTPAERHASDDEPFSALAFKIATDPFVGNLT
                     FFRVYSGVVNSGDTVLNSVKTARERFGRIVQMHANKREEIKEVRAGDIAAAIGLKDVT
                     TGDTLCDPENPIILERMEFPEPVISIAVEPKTKADQEKMGLALGRLAKEDPSFRVWTD
                     EESNQTIIAGMGELHLDIIVDRMKREFNVEANVGKPQVAYREAIRAKVTDIEGKHAKQ
                     SGGRGQYGHVVIDMYPLEPGSNPKGYEFINDIKGGVIPGEYIPAVDKGIQEQLKSGPL
                     AGYPVVDLGVRLHFGSYHDVDSSELAFKLAASIAFKEGFKKAKPVLLEPIMKVEVETP
                     EENTGDVIGDLSRRRGMLKGQESEVTGVKIHAEVPLSEMFGYATQLRSLTKGRASYTM
                     EFLKYDDAPNNVAQAVIEARGK"
     gene            complement(2582..3052)
                     /gene="rpsG"
                     /locus_tag="MOX77_003674"
     CDS             complement(2582..3052)
                     /gene="rpsG"
                     /locus_tag="MOX77_003674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015873274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HCA3359097.1"
                     /translation="MPRRRVIGQRKILPDPKFGSELLAKFVNILMVDGKKSTAESIVY
                     SALETLAQRSGKSELEAFEVALENVRPTVEVKSRRVGGSTYQVPVEVRPVRRNALAMR
                     WIVEAARKRGDKSMALRLANELSDAADNKGTAVKKREDVHRMAEANKAFAHYRW"
     gene            complement(3148..3522)
                     /gene="rpsL"
                     /locus_tag="MOX77_003675"
     CDS             complement(3148..3522)
                     /gene="rpsL"
                     /locus_tag="MOX77_003675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005306278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HCA3359098.1"
                     /translation="MATVNQLVRKPRARKVAKSNVPALEACPQKRGVCTRVYTTTPKK
                     PNSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGAL
                     DCSGVKDRKQARSKYGVKRPKA"
     gene            complement(3648..3935)
                     /gene="tusB"
                     /locus_tag="MOX77_003676"
     CDS             complement(3648..3935)
                     /gene="tusB"
                     /locus_tag="MOX77_003676"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase complex subunit TusB"
                     /protein_id="HCA3359099.1"
                     /translation="MLHTLPHCASGVDFPALLRLLKEGDALLLLQDGVTVAIEGNRFL
                     ESLRDAPITVYALKEDIDARGLGGQISDSVVRVDYTEFVRLTVKYANQMAW"
     gene            complement(3943..4299)
                     /gene="tusC"
                     /locus_tag="MOX77_003677"
     CDS             complement(3943..4299)
                     /gene="tusC"
                     /locus_tag="MOX77_003677"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase complex subunit TusC"
                     /protein_id="HCA3359100.1"
                     /translation="MKRIAFVFSTAPHGSASGREGLDALLATSALTEALGVFFISDGV
                     FQLLPGQKPDAVLARDYIATFKLFDLYDIDQCWICAASLRERGLENVNFVVNATPLEP
                     VALRRELGNYDVILRF"
     gene            complement(4299..4685)
                     /gene="tusD"
                     /locus_tag="MOX77_003678"
     CDS             complement(4299..4685)
                     /gene="tusD"
                     /locus_tag="MOX77_003678"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase complex subunit TusD"
                     /protein_id="HCA3359101.1"
                     /translation="MRYAIMVTGPAYGTQQASSALQFAHALLNEGHELASVFFYREGV
                     YNANLLTSPASDEYDLVRVWQKLNTQHGVALNICVAAALRRGIIDETEAGRLELPSAN
                     LQPGFTLSGLGALAEASLTCDRVVQF"
     gene            complement(4685..5407)
                     /locus_tag="MOX77_003679"
     CDS             complement(4685..5407)
                     /locus_tag="MOX77_003679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HCA3359102.1"
                     /translation="MSRSLLTNETSELDLLDQRPFEQTDFDILKSYEAVVDGLAMLIG
                     SHCEIVLHSLQDLKCSAIRIANGEHTGRKIGSPITDLALRMLHDMTGADSSVSKCYFT
                     RAKSGVLMKSLTIAIRNREQRVIGLLCINMNLDVPFSQIMNTFIPPETPEVGSAVNFA
                     SSVEDLVTQTLEFTIEEVNADRNVSNNAKNRQIVLNLYEKGIFDIKDAINQVADRLNI
                     SKHTVYLYIRQFKSGDFQGQDK"
     gene            complement(5684..6502)
                     /gene="fkpA"
                     /locus_tag="MOX77_003680"
     CDS             complement(5684..6502)
                     /gene="fkpA"
                     /locus_tag="MOX77_003680"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HCA3359103.1"
                     /translation="MKSLFKATLLATTMAVAMHVPITFAADAAKPAATADSKAAFKND
                     DQKAAYALGASLGRYMENSLKEQEKLGIKLDKDQLIAGVQDAFADKSKLSDQEIEQTL
                     QTFEARVKSAAQAKMEKDAADNEAKGKTFRDAFAKEKGVKTSSTGLLYKVEKEGTGEA
                     PKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRLDGVIPGWTEGLKNIKKSGKIKLV
                     IPPALAYGKTGVPGIPANSTLVFDVELLDIKPAPKADAKPADAADAKAADAAKK"
     gene            6722..6940
                     /locus_tag="MOX77_003681"
     CDS             6722..6940
                     /locus_tag="MOX77_003681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein SlyX"
                     /protein_id="HCA3359104.1"
                     /translation="MQDITMEARLAELESRLAFQEITIEELNLTVTAHEMEMAKLRNH
                     LRLLTEKLKASQPSNIASQAEETPPPHY"
     gene            complement(7127..7717)
                     /gene="slyD"
                     /locus_tag="MOX77_003682"
     CDS             complement(7127..7717)
                     /gene="slyD"
                     /locus_tag="MOX77_003682"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HCA3359105.1"
                     /translation="MKVAKDLVVSLAYQVRTEDGVLVDESPVSAPLDYLHGHGSLISG
                     LETALEGHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQ
                     GPVPVEITEVEDDHVVVDGNHMLAGQNLKFNVEVVAIREATEEELAHGHVHGAHDHHH
                     DHGEDGCCSGHGHDHGHEHGGEGCCGGGGKGSCGCH"
     gene            complement(7812..8012)
                     /locus_tag="MOX77_003683"
     CDS             complement(7812..8012)
                     /locus_tag="MOX77_003683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YheV family putative metal-binding protein"
                     /protein_id="HCA3359106.1"
                     /translation="MAIRKRFIAGAKCPACQAQDTMAMWRENNVDIVECVKCGHQMRE
                     ADKDVREHVRKEEQVIGIFHPD"
     gene            complement(8022..>9677)
                     /gene="kefB"
                     /locus_tag="MOX77_003684"
     CDS             complement(8022..>9677)
                     /gene="kefB"
                     /locus_tag="MOX77_003684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-regulated potassium-efflux system
                     protein KefB"
                     /protein_id="HCA3359107.1"
                     /translation="SDVDEILHFSELGVVFLMFIIGLELNPSRLWQLRRSIFGVGAAQ
                     VLLSAAVLAGLLMLADFLWQAAVVGGIGLAMSSTAMALQLMREKGMNRSESGQLGFSV
                     LLFQDLAVIPALALVPLLAGSADEHFDWFKVAMKVLAFAVMLIGGRYLLRPVFRFIAA
                     SGVREVFTAATLLLVLSAALFMDALGLSMALGTFIAGVLLAESEYRHELENAIDPFKG
                     LLLGLFFISVGMSLNLGVLYTHLLWVAASVVILVVIKMLTLYLLARLYGIRSSERMQF
                     ASVLSQGGEFAFVLFSTASSQRLFQGDQMALLLVTVTLSMMTTPLLMKGIDKWLSRRL
                     NGPEENDEKPWVEDDKPQVVVVGFGRFGQVIARLLMANKMRITVLERDIGAVNLMRKY
                     GYKVYYGDATQVELLRSAGAEAAESIVITCNEPEDTMKLVALCQQHFPHLHILARARG
                     RVEAHELLQAGVTQFSRETFSSALELGRKTLVSLGMHPHQAQRAQLHFRRLDMRMLRE
                     LIPEHSDMVQISRAREARRELEEIFQREMQQERRQLDGWDEFE"
BASE COUNT         2364 a         2653 c         2329 g         2331 t
ORIGIN      
        1 tccatctgcg cagcaccggt gatcatgttt tttacatagt cggcgtgccc cgggcagtct
       61 acgtgtgcgt agtggcgggt cggggtatcg tattcaacgt gagaagtgtt gatggtgata
      121 ccacgcgctt tttcttccgg agcgttatcg atctggtcga atgcacgagc agcaccgccg
      181 taggttttag ccagtacggt ggtgattgca gcggtcaggg tagttttacc gtggtcaacg
      241 tggccgatgg tgccgacgtt aacgtgcggt tttgtacgtt caaatttttc tttagacacg
      301 gctatattcc ttactatagc gctctcccct tcaggagaga gcacgggatt ttggttttta
      361 accctgcggc ttatttacca cgggcttcga ttacggcctg agcaacgttg ttcggcgcat
      421 catcatactt caggaattcc atagtgtacg atgcgcgacc tttggtcaga gaacgcagct
      481 gagttgcata tccgaacatt tcagacagcg gtacttcagc gtggatctta acgcctgtaa
      541 cttcagattc ctgacctttg agcataccac gacggcggct aaggtcgccg ataacgtcac
      601 cggtattctc ttcaggtgtt tctacttcaa ccttcatgat cggctcaagc agaactggtt
      661 ttgctttctt aaagccttct ttaaaggcga tagacgcagc cagtttaaac gccagctcag
      721 aggagtcaac gtcatggtaa gaaccgaagt gcagacgcac accgagatca actaccggat
      781 aacccgccag cgggccagat ttcagctgct cctggatgcc tttatcaacg gccgggatgt
      841 actcgccagg aattacacca cctttgatgt cgttgatgaa ctcgtaacct ttcgggttag
      901 agcccggctc cagcgggtac atgtcgataa caacatgacc atactgaccg cgaccaccag
      961 actgtttcgc gtgtttacct tcgatgtcgg taactttcgc gcgaatcgct tcgcggtaag
     1021 caacctgagg tttacccacg ttcgcttcaa cgttgaattc acgcttcata cggtcaacga
     1081 tgatatctag gtgaagttca cccataccag cgatgatggt ctggttagat tcttcatcag
     1141 tccatacgcg gaacgacggg tcttctttcg ccagacggcc cagagccaga cccatttttt
     1201 cctggtcagc tttggttttc ggttctaccg cgatggagat taccggctca gggaattcca
     1261 tacgttccag aatgatcggg ttttccggat cacacagggt gtcaccggta gtcacgtctt
     1321 tcaggccgat agcagccgcg atgtcgcccg cgcgaacttc tttgatctct tcacgtttgt
     1381 tagcgtgcat ctgaacgata cgaccgaaac gctcacgtgc ggttttcacg gagttcagta
     1441 cggtatcacc agagttaacc acaccggagt acacacggaa gaaggtcagg ttacccacaa
     1501 acgggtcggt agcgattttg aacgccagcg cagagaacgg ctcgtcgtcg cttgcgtgac
     1561 gctcagccgg agtatcttta ccgtcgtcca gaataccgtt gatcgcaggt acgtctaccg
     1621 gggatggcag gtaatcaatt accgcatcca gcatcgcctg aacacctttg ttcttaaatg
     1681 cagaaccaca ggttaccagg atgatttcgt tgttcagaac gcgctgacgc agagcttgtt
     1741 tgatctcttc ttcagtcagt tcttcaccac ccaggtattt ttccatcagc tcttcagaag
     1801 cttctgcggc ggactcgatc aggttctggt gccattcgtt agccaggtcc tgcatgtcag
     1861 ccgggatatc ttcgtattcg aaggtaacgc cctggtcggc atcgttccag ttgatggctt
     1921 tcattttcac caggtcaaca acgccggtga aaccttcttc agcaccaatt gccagctgca
     1981 gcggaaccgg gttcgcgccc agacgggttt tgatctgacc aacaactttc aggaagttcg
     2041 cgcccatgcg gtccattttg ttaacgaacg caatgcgcgg aactttgtat ttgtttgcct
     2101 gacgccatac ggtttcagac tgcggctgaa caccaccaac tgcgcagtaa accattaccg
     2161 caccatcgag aacacgcatg gaacgttcta cttcgatagt gaagtcaacg tgccccgggg
     2221 tgtcgatgat gttgatgcga tgcggttcat actgcttagc cataccagac cagaatgcag
     2281 tagtcgctgc ggaggtgata gtaataccac gctcctgctc ctgctccatc cagtccatgg
     2341 tagctgcgcc gtcatgaact tcaccgattt tgtggtttac accggtgtag aacagaatac
     2401 gttcggtagt agtggtttta ccggcgtcga tgtgcgcact gataccgata ttacggtagc
     2461 gtgcgatggg tgttgtacga gccatttgat tcctcgttga tatctttagg cgttcagtta
     2521 agttatccaa aacgggcgac ttacctgaag cgcccgcctg gtgactatga ctccgaaggg
     2581 attaccaacg gtagtgtgcg aacgccttgt tggcttctgc catacggtga acgtcttcac
     2641 gtttcttaac tgcagtacct ttgttgtctg cagcgtcaga aagttcgttc gccaggcgca
     2701 gagccatgga tttatcaccg cgtttacgag cagcttctac gatccaacgc attgccagag
     2761 cattacgacg gaccggacgg acttcaactg gtacctgata agtagaacca cctacacggc
     2821 gggatttaac ttctacagtc gggcgaacgt tttcgagagc gacttcgaaa gcttccagtt
     2881 cagatttacc agaacgctga gccagggtct ccagcgcgct gtatacgatt gattctgcag
     2941 tagatttttt accatctacc atcaggatat tgacaaattt agccagcagt tctgatccga
     3001 acttcggatc cggcagaatt ttacgctgac caatgacgcg acgacgtggc atggaaatac
     3061 tccgttgtta attcaggatt gtccaaaact ctacgagttt agtttgacat taatttaaaa
     3121 cgtttggcct tacttaacgg agaaccatta agccttagga cgcttcacgc cgtacttaga
     3181 acgagcttgc ttacggtctt taacgccgga gcagtcaagc gcgccacgaa cggtgtggta
     3241 acgaacaccc gggaggtctt taacacgacc gccacggatc aggatcacgg agtgctcctg
     3301 caggttgtga ccttcaccac cgatgtagga agtcacttca aaaccgttag tcagacgaac
     3361 acggcaaact ttacgcagtg cggagttcgg ttttttagga gtggtagtat atacacgagt
     3421 acatacgcca cgtttttgcg ggcatgcttc cagcgcaggc acgttgcttt tcgcaacttt
     3481 gcgagcacgt ggtttgcgta ccagctggtt aactgttgcc attaaatagc tcctggtttt
     3541 agcttttgct tcgtaaacac gtaataaaac gccctcacac aatatgagga cgccgaattt
     3601 tagggcggtg tcgaaaaggt gtcaagaaat atacaacgat cccgccatca ccaggccatc
     3661 tggttggcat acttaaccgt gagtctgaca aactcagtat agtcaaccct gacgacactg
     3721 tctgaaattt gaccacccag gccgcgagcg tcaatgtctt ctttcaaggc atagaccgtt
     3781 atgggggcat cgcgcagact ttcaaggaag cggttacctt caatcgcgac ggtaacgcca
     3841 tcctggagca gcaaaagcgc atcgccctct tttagcaggc gcagcaaagc gggaaaatca
     3901 acgcccgaag cgcaatgagg taaggtatgc agcataaacg cctcagaatc tcaggatgac
     3961 atcatagttg ccaagctcgc ggcgtaacgc cacgggttcc agcggcgtgg cgtttaccac
     4021 aaaattaacg ttttccagac cacgctcgcg cagcgatgcc gcgcagatcc agcattgatc
     4081 aatatcgtac aaatcaaaga gcttgaaagt agcaatatag tcacgcgcca gcacagcgtc
     4141 tggtttttgc cccggtaata actgaaagac gccgtcgctg ataaaaaaga cgcccagcgc
     4201 ttccgttagc gctgacgtcg ccagcagcgc atccagtcct tcacggcctg aggcgctacc
     4261 gtgcggcgcg gtggaaaaga caaatgcaat acgtttcatt aaaactgcac cacccgatcg
     4321 caggtgagag aagcctccgc cagcgcgccc agtccgctta gcgtaaagcc cggctgaaga
     4381 ttggcggacg gcaactccag tctgccggct tcagtttcat caataatacc gcgacgaagc
     4441 gccgccgcga cacagatgtt cagcgctacg ccatgctgcg tattcaattt ctgccagacg
     4501 cgtaccagat catattcatc gctcgccggc gaggtcagga gattggcgtt atagacacct
     4561 tcccgataga aaaagacgct ggctaactca tgcccctcat tgagcagcgc gtgggcgaac
     4621 tgcaatgcgc tgctggcctg ctgggtgcca tatgcaggcc cggtgaccat aatggcataa
     4681 cgcattattt atcctgcccc tgaaaatcgc cgcttttgaa ctggcgaata tagaggtaaa
     4741 ccgtgtgttt tgagatattc agacgatcgg ctacctggtt aatggcgtct ttaatatcga
     4801 aaatgccttt ttcgtacaag ttaaggacga tctgacgatt tttcgcattg ttagagacat
     4861 tacgatcggc attcacttct tcgatcgtga actccagcgt ctgggtgact aaatcttcga
     4921 ctgaggaggc aaaattaacc gctgagccga cttccggcgt ttccggcgga ataaaggtat
     4981 tcataatctg tgaaaatggc acatcaagat tcatgttgat gcacagtaga ccaatgacgc
     5041 gctgctcgcg gttgcgaatg gcaatcgtca acgacttcat caagacaccg cttttcgcgc
     5101 gcgtaaaata gcatttcgac acgctactgt ccgcccctgt catgtcgtgc aacatgcgca
     5161 acgccaggtc ggtaatcggc gagccaattt tacggcccgt atgttcgcca ttggcaatac
     5221 gaatggctga acattttaga tcctgcaaag agtgcaatac gatttcacaa tgggaaccta
     5281 taagcatcgc taacccgtcc actaccgctt cgtaggattt cagaatatcg aagtcggttt
     5341 gctcgaaggg acgctgatcc agcaaatcaa gttcactggt ttcgttggtt aaaagcgacc
     5401 tggacatgaa aaaaaacact ccttttcagg agcctgtcgt tatgttttca gggcaggctc
     5461 attatttacg cggatgatta aattaataca gtgagggttc atctttccag tactaatttg
     5521 ctcgtctatt tcagactacg tgtgcgttgg cggtcattca gcctacggtc tcgcccttaa
     5581 cgaccagcgc aagcgccgtt atccgcaaat caaattatgg tgagtaatat atccggcctg
     5641 aataaaaaaa accgccgcta ttacaagcgg cggctctcag tttttatttt ttagcagcat
     5701 ctgcggcttt agcgtcagcc gcatcggcag gtttagcatc cgctttcggc gctggtttga
     5761 tatccagcag ctctacgtcg aataccaggg tggagttcgc agggataccc ggaacgcccg
     5821 ttttaccgta ggccagcgcc ggtgggataa ccagcttgat cttgccgctt ttcttaatat
     5881 ttttcaggcc ttcagtccag ccagggataa cgccgtccag acggaaggag agcggttcgc
     5941 cgcgcgtgta agagttatca aactctttac cgtcgatcag cgtacctttg tagttcacca
     6001 caacggtatc gctatctttc ggcgcctcgc ctgtgccttc tttctctact ttgtaaagca
     6061 gaccggtaga ggaggttttc acgcctttct ctttagcaaa agcgtcacgg aacgttttac
     6121 cttttgcttc gttatcggca gcgtcttttt ccatcttcgc ctgagcagcg ctcttcacac
     6181 gtgcttcaaa cgtctgcagc gtttgctcaa tttcctgatc ggacagtttg ctcttatcgg
     6241 caaaggcatc ctgaacgccg gcaatcaact gatctttatc cagtttgatg cccaactttt
     6301 cctgctcttt aagcgaattt tccatgtaac gacccagcga ggcgcccagc gcataagccg
     6361 ctttttgatc gtcgttttta aatgctgctt tgctatcagc ggtagctgcc ggtttcgccg
     6421 catcagcagc aaaagtgatc ggtacgtgca tagcaacggc catcgtcgtt gccagcagcg
     6481 tggctttaaa cagtgatttc atccatatct ccagggccgg ggcatctcgc cccatgttaa
     6541 cttacgtaag aagcgtacta taaatcgttg cagaacaaat caacatacga acacgcccta
     6601 ttatcacttc ttttcagact ctttttgttt aaattagttt cgtagggcgc gtaatggttg
     6661 ctgtgaaagc cggtaaagtt aagtagaatc cgccgacgga gacaacataa agaggtacat
     6721 catgcaggat atcacgatgg aagctcgtct ggctgaactg gaaagccgtc tggcgttcca
     6781 ggagattacc atagaagaac taaacctgac ggtaaccgca catgaaatgg agatggcgaa
     6841 gctgcgcaat catctgcgtt tgctcacgga aaagttaaaa gccagtcagc cgtcaaatat
     6901 cgcctctcag gcagaagaaa cgccgccgcc gcattattga gacgaaaaaa agcggggata
     6961 cccgcttttt ttgtgcccga tgatttatcg aaccaatgat aataacctaa ggatttcgag
     7021 tcacagcaaa gcggcaagct tgaaaattcc ccgggaacat agataactat gtgaccgggg
     7081 tttgaaagcg tagccaacac cgcggtggct tgaaagacga cggggattaa tggcagccgc
     7141 agctgccttt accaccaccg ccgcagcagc cttcgccgcc gtgctcgtga ccatggtcat
     7201 gaccatgacc gctacagcag ccgtcttcac cgtgatcgtg gtggtgatcg tgcgcgccgt
     7261 gaacatgacc gtgagccagt tcttcttcag tcgcttcacg aatcgcaaca acttcgacgt
     7321 taaatttcag attctggccc gccagcatgt ggttaccatc aaccacaacg tgatcgtctt
     7381 ccacttcggt aatctctacc ggtaccgggc cctggtcggt ttccgccagg aaacgcatcc
     7441 ctacctgcag ttcatcaacg cccataaaga cgtctttagg cacacgctgc accagatttt
     7501 cgtcatactg gccgtaagcg tcgttcgcgc caacagcgac atcaaatttg tcgccaactt
     7561 catggccttc cagcgcggtt tccagaccag agatcaggga gccgtgaccg tgcaggtaat
     7621 ccagcggcgc actcaccgga gactcatcaa ccaacacacc gtcttctgta cgtacctgat
     7681 aggccaggct gaccaccagg tcttttgcta ctttcatgat atctcctgag catgggaaga
     7741 atagtggcgc agattgtagc ggaattctgc agccgtgtac cccttagctt aaaaaaacct
     7801 gcggcatatc gctagtccgg atgaaaaatc ccgatcactt gctcttcttt gcgaacatgc
     7861 tcgcgaacgt ctttatccgc ttcccgcatt tgatgcccgc acttaacgca ttcaacaata
     7921 tcgacattat tttcacgcca catcgccatt gtatcctgcg cctgacaggc cggacatttc
     7981 gcgcctgcaa taaaacgttt acggattgcc attgttcacc tctactcaaa ttcatcccag
     8041 ccatccaact ggcgccgttc ctgttgcatt tcgcgctgaa aaatctcctc cagctcgcgt
     8101 cgggcctctc tggcgcgcga aatctgtacc atgtcgctat gctccgggat cagctcccgc
     8161 aacattcgca tatccagccg acgaaaatgc aactgcgcgc gttgcgcctg atgcggatgc
     8221 atacctaacg acaccagagt tttacgtccc agttccagcg cgctggaaaa cgtttcacgg
     8281 gaaaactgcg tgacgccagc ctgtaataac tcatgggcct ccacacgtcc acgcgctcgc
     8341 gcaagaatat gcagatgagg aaaatgctgc tgacacagcg ccaccagctt catcgtgtct
     8401 tccggttcat tacacgtgat gactatcgac tccgccgcct ccgcgcccgc agaacgcagc
     8461 agctcgactt gtgtagcgtc gccgtaatac actttataac catatttgcg catcagatta
     8521 acggcgccga tatcgcgttc cagcacggtg atacgcatct tattcgccat caataagcga
     8581 gcgatcacct gaccaaaacg gccaaagccg acgacaacca cctggggctt atcatcctca
     8641 acccacggct tttcatcatt ctcttccggg ccattaagac ggcgcgataa ccacttatca
     8701 atccctttca tcagtagcgg cgtggtcatc attgataatg tgacagtcac caataataac
     8761 gccatctgat cgccctgaaa caggcgctga gaagaggcgg tagaaaagag cacaaaagcg
     8821 aactcgcccc cctgactcag cacgctggca aactgcatcc gttcagaact tcttattcca
     8881 tatagccgcg ccagcagata cagcgtcagc atttttatga cgaccagaat aacaacgctc
     8941 gccgccaccc acagtaaatg ggtataaagt acgccgagat ttagcgacat accgacggag
     9001 ataaagaaca gcccaagcag taaaccttta aagggatcga tagcattttc cagctcatgc
     9061 cggtattcgc tctctgccag taaaacgccg gcaatgaagg ttcccagggc catcgacagt
     9121 cccagcgcat ccataaataa ggcggcgctc aacaccagca acagcgtcgc ggcagtgaag
     9181 acctcccgca cgccagacgc agcaataaaa cgaaataccg ggcgcagcag gtaacgaccg
     9241 ccaatcagca ttaccgcgaa agccagtacc ttcattgcca ctttaaacca gtcgaaatgc
     9301 tcgtcggccg atcccgccaa taaaggcacc aacgccagcg cggggatcac cgctaaatcc
     9361 tgaaacagta agacggaaaa ccctaactgc ccggactcgc tacgattcat gcctttctcg
     9421 cgcatcagtt gtagcgccat cgccgtcgaa gacatcgcca ggccaatccc gccgacgacc
     9481 gccgcctgcc ataagaaatc agcaagcatc aataatcccg ccagcaccgc cgcgcttaac
     9541 agcacctgag cagcgccgac gccgaagata gagcgccgca gttgccaaag ccgtgacgga
     9601 ttgagttcga gaccaatgat aaacatcaga aacacgacgc ccagttcgga aaagtgcagg
     9661 atctcgtcaa catcgct
//
LOCUS       DAGWFR010000156         9467 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.158, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000156 DAGWFR010000000
VERSION     DAGWFR010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 9467)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9467)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9467
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.158"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..329)
                     /locus_tag="MOX77_003685"
     CDS             complement(<1..329)
                     /locus_tag="MOX77_003685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HCA3359108.1"
                     /translation="MQQPQVWLVEDEQGIADTLIYTLQLEGFTVELFARGLPALEKAR
                     QQRPDAVILDVGLPDISGFELCRQLLERHPALPILFLTARSDEVDRLLGLEIGADDYV
                     AKPFSPR"
     gene            complement(342..815)
                     /gene="creA"
                     /locus_tag="MOX77_003686"
     CDS             complement(342..815)
                     /gene="creA"
                     /locus_tag="MOX77_003686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein CreA"
                     /protein_id="HCA3359109.1"
                     /translation="MKYKSLVLFSILLLLGQSARAEQIGSVDTVFKMFGPDHKIVVEA
                     FDDPDVKNVTCYVSRAKTGGIKGGLGLAEDTSDAAISCQQVGPIELSDKIKNGKAQGE
                     VVFKKRTSLIFKSLQVVRFYDEKRNTLAYLAYSDKVVDGSPKNAISAVPVMPWRQ"
     gene            1027..1896
                     /gene="robA"
                     /locus_tag="MOX77_003687"
     CDS             1027..1896
                     /gene="robA"
                     /locus_tag="MOX77_003687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MDR efflux pump AcrAB transcriptional activator
                     RobA"
                     /protein_id="HCA3359110.1"
                     /translation="MDQAGIIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKD
                     VTGHAIGAYIRARRLSKSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQFSQTPAL
                     YRRSPEWSAFGIRPPLRLGEFTVPEHQFVTLEDTPLLGVTQSYSCSLEQISDFRHEMR
                     VQFWHDFLGHSPTIPPVLYGLNETRPSMEKDDEQEVFYTTALPQEQADGYVQSAHPVL
                     LQGGEYVMFTYEGLGTGVQDFILTVYGTCMPMLNLTRRKGQDIERYYPSEDTKTGDRP
                     INLRCEFLIPIRR"
     gene            complement(1893..2540)
                     /gene="gpmB"
                     /locus_tag="MOX77_003688"
     CDS             complement(1893..2540)
                     /gene="gpmB"
                     /locus_tag="MOX77_003688"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase GpmB"
                     /protein_id="HCA3359111.1"
                     /translation="MLQVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVGERAR
                     SLGITHIISSDLGRTKRTAEIIAQACGCDITFDFRLRELDMGVLEKRQIDSLTEEEEG
                     WRRQLVNGTQDGRIPGGESMQELSDRVHAALASCLELPQGSRPLLVSHGIALGCLVST
                     ILGLPAWAERRLRLRNCSISRIDYQESQWLASGWVVETAGDVSHLDTPALDELQR"
     gene            2588..2923
                     /locus_tag="MOX77_003689"
     CDS             2588..2923
                     /locus_tag="MOX77_003689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF84 family protein"
                     /protein_id="HCA3359112.1"
                     /translation="MHQVISATTNPAKIQAILQAFEEIFGEGSCHITPVAVESGVPEQ
                     PFGSEETRAGARNRVGNARRLHPQADFWIGRKEGAIGVFTAGKLTRSSVYYQAVILAL
                     SPFHNAVYR"
     gene            complement(3025..3351)
                     /gene="trpR"
                     /locus_tag="MOX77_003690"
     CDS             complement(3025..3351)
                     /gene="trpR"
                     /locus_tag="MOX77_003690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trp operon repressor"
                     /protein_id="HCA3359113.1"
                     /translation="MTQHSPYSSAIAEQRNQEWLRFVELLRQAYAEDLHLPLLQLMLT
                     PDEREALGTRVRIIEELLRGEMSQRELKTELGAGIATITRGSNSLKSAPVELRHWLEQ
                     ILLKSA"
     gene            complement(3409..5346)
                     /gene="sltY"
                     /locus_tag="MOX77_003691"
     CDS             complement(3409..5346)
                     /gene="sltY"
                     /locus_tag="MOX77_003691"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418809.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase"
                     /protein_id="HCA3359114.1"
                     /translation="MDRAKPFVWRLVAASVCLLTFCHLARADSLEEQRNRYAQIKQAW
                     DNRQMDVVEQMMPGLKDYPLYPYLEYRKITDDLMNQPAIAVTQFVRANPTLPPARTLQ
                     SRFVNELARREDWRGLLAFSPEKPGTTEAQCNYYYAKWSTGQTEAAWQGAKDLWLTGK
                     SQPNACDKLFSVWRASGKQDPLAYLERIRLAMKAGNTGLVTVLAGQMPAEYQTIASAI
                     ITLANDPNNVLTFARTTGATDFTRQMAEVAFASVARQDAENARLMIPSLVQAQKLNEE
                     QTQALRDIVAWRLMGNDVTDAQAKWRDDAIMRSQSTSLIERRVRMALGMGDRRGLNTW
                     LARLPMEAKEKDEWRYWQADLLLERGRDAEAKEILHALMQKRGFYPMVAAQRLGEEYT
                     LKIDKAPANVNSALTQGPEMARVRELMYWNLDNTARSEWANLVKSRSKSEQAQLARYA
                     FNQHWWDLSVQATIAGKLWDHLEERFPLAYNDLFTRYTRGKDISQSYAMAIARQESAW
                     NPKVKSPVGASGLMQIMPGTATHTVKMFSIPDYRGPGQLLEPETNINIGTSYLQYVYQ
                     QFGNNRIFASAAYNAGPGRVRTWLGNSAGRIDAVAFVESIPFSETRGYVKNVLAYDAY
                     YRHFMGQKEALMSDSEWQRRY"
     gene            5555..7222
                     /gene="ettA"
                     /locus_tag="MOX77_003692"
     CDS             5555..7222
                     /gene="ettA"
                     /locus_tag="MOX77_003692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017145039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HCA3359115.1"
                     /translation="MAQFVYTMHRVGKVVPPKRHILKNISLSFFPGAKIGVLGLNGAG
                     KSTLLRIMAGLDKDIEGEARPQPGIKIGYLPQEPQLNPEHTVRESIEEAVSEVVNALK
                     RLDEVYALYADPDADFDKLAAEQGRLEEIIQAHDGHNLNVQLERAADALRLPDWDAKV
                     EKLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHD
                     RYFLDNVAGWILELDRGEGIPWEGNYSSWLEQKDQRLAQEASAEAARRKSIEKELEWV
                     RQGAKGRQSKGKARLARFEELNSVEYQKRNETNELFIPPGPRLGDKVIEVSNLRKSYG
                     DRVLIDDLSFSVPKGAIVGIIGPNGVGKSTLFRMMSGQEQPDSGTITLGETVKLASVD
                     QFRDAMDNSKTVWEEVSGGLDIMKIGNTEMPSRAYVGRFNFKGVDQGKRVGELSGGER
                     GRLHLAKLLQVGGNVLLLDEPTNDLDIETLRALENALLEFPGCAMVISHDRWFLDRIA
                     THILDYQDEGKVEFFEGNFTEYEEYKKRTLGAEALEPKRIKYKRIAK"
     gene            complement(7340..8572)
                     /gene="nadR"
                     /locus_tag="MOX77_003693"
     CDS             complement(7340..8572)
                     /gene="nadR"
                     /locus_tag="MOX77_003693"
                     /EC_number="2.7.1.22"
                     /EC_number="2.7.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463436.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional transcriptional
                     regulator/nicotinamide-nucleotide
                     adenylyltransferase/ribosylnicotinamide kinase NadR"
                     /protein_id="HCA3359116.1"
                     /translation="MSSFDYLKTAIKQQGCTLQQVADASGMTKGYLSQLLNAKIKSPS
                     AQKLEALHRFLGLEFPRRQKNIGVVFGKFYPLHTGHIYLIQRACSQVDELHIIMGYDD
                     TRDRGLFEDSAMSQQPTVSDRLRWLLQTFKYQKNIRIHAFNEEGMEPYPHGWDVWSNG
                     IKAFMAEKGIQPSWIYTSEEADAPQYLEHLGIETVLVDPERTFMNISGAQIRENPFRY
                     WEYIPTEVKPFFVRTVAILGGESSGKSTLVNKLANIFNTTSAWEYGRDYVFSHLGGDE
                     MALQYSDYDKIALGHAQYIDFAVKYANKVAFIDTDFVTTQAFCKKYEGREHPFVQALI
                     DEYRFDLVILLENNTPWIADGLRSLGSSVDRKAFQNLLVEMLKENNIEFVHVKEADYD
                     GRFLRCVELVKEMMGEQG"
     gene            complement(8723..>9467)
                     /gene="radA"
                     /locus_tag="MOX77_003694"
     CDS             complement(8723..>9467)
                     /gene="radA"
                     /locus_tag="MOX77_003694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001399683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HCA3359117.1"
                     /translation="AIVMVGHVTKDGSLAGPKVLEHCIDCSVLLDGDADSRFRTLRSH
                     KNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEVTSGSSVMVVWEGTRPLLVEIQ
                     ALVDHSMMANPRRVAVGLEQNRLAILLAVLHRHGGLQMSDQDVFVNVVGGVKVTETSA
                     DLALLLAMVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERISEAAKHGFRRAIVPA
                     ANVPKKPPEGMQVFGVKKLADALSVFDDL"
BASE COUNT         2129 a         2733 c         2453 g         2152 t
ORIGIN      
        1 tcgcgcggcg agaacggctt ggcgacataa tcatctgcgc cgatctccag accaagcaat
       61 cgatccactt catcgctacg ggcagtcagg aaaagaatcg gcagcgccgg atgacgctcc
      121 agcaactgcc gacacagctc aaagccgctg atatccggta gtcccacatc gagaatcacc
      181 gcatctggcc gttgctgacg cgctttttcc agcgcgggca gcccgcgagc gaatagctca
      241 acggtaaacc cttccagttg cagggtgtag atgagcgtat cggcgattcc ctgttcatcc
      301 tcgactaacc agacctgcgg ttgctgcata cgctttccct gttattgtcg ccacggcatg
      361 accggcaccg cgctgatggc gttcttcggc gacccgtcga ccactttgtc ggagtaggcc
      421 agatacgcca gcgtgttgcg tttctcatca tagaaacgta cgacctgtaa tgacttaaat
      481 atcaatgagg tgcgtttttt gaaaaccacc tctccctgcg ccttgccgtt cttaattttg
      541 tcgctcagtt caataggccc gacctgctga caagagatag cggcgtcaga cgtatcttcc
      601 gccagcccca atccgccttt tatgccgccc gttttcgccc ggctaacata gcacgtcacg
      661 tttttgacat caggatcgtc aaaagcttcc accacgattt tatggtcagg gccgaacatt
      721 ttaaataccg tatcgactga accaatttgt tccgcgcggg cgctctgccc cagcagcaac
      781 aaaattgaga aaagtactaa gctcttgtat ttcatattgt taccattcat aaaagctacg
      841 ttgcgtaatt attagacatt ctaaaataaa atggttatag atcacaggat tagaataatt
      901 acctgtcacg ttgcctaaaa aaagcattta agctcaaaaa aaacactgaa tgctaaaaga
      961 acaaaaaatg ctattatcct cttacctgat atcgggtgct cgttgttgaa aggatgggga
     1021 tattttatgg atcaggctgg cataattcgc gacctgttaa tctggctgga aggtcatctg
     1081 gatcagccgc tgtcacttga caatgtggcg gcaaaagcag gctattccaa gtggcaccta
     1141 cagagaatgt ttaaggacgt gacgggccac gctattggcg cttatatccg cgcccgtcgt
     1201 ttatcgaaat cagcagtggc gctgcgttta accgcgcgtc caattctgga tattgctctt
     1261 cagtaccgct tcgattctca gcaaaccttt acgcgcgcct ttaagaaaca gttttcccag
     1321 acgccagcgt tgtatcgtcg ctccccggaa tggagcgcct ttggcattcg cccgccatta
     1381 cggctgggcg agtttaccgt gccggaacat cagttcgtta cgctggaaga tacgccgctg
     1441 cttggcgtca cgcagagcta ttcctgctcg ctggaacaga tttccgactt ccgccacgaa
     1501 atgcgcgtgc aattctggca tgatttcctc ggtcattcgc caactattcc accagtgctt
     1561 tatgggctta atgaaacgcg ccccagcatg gagaaagacg atgagcagga agtattctat
     1621 accaccgcac tgccgcaaga gcaggccgat ggctatgttc agtcggcgca tcccgtgctg
     1681 ttgcagggag gtgaatacgt catgttcacc tatgaagggt taggaaccgg cgtgcaggat
     1741 tttatcctga ccgtttacgg cacctgtatg ccaatgctga atctgacccg tcgtaaaggg
     1801 caggatatag agcgatacta cccgtcagaa gataccaaaa ccggcgatcg ccctatcaac
     1861 ctgcgctgcg aatttctgat cccgattcgc cgttaacgct gtagctcatc caatgcaggg
     1921 gtgtccagat gcgaaacgtc ccctgcggtt tctaccaccc agccagacgc cagccactga
     1981 ctttcctggt aatcgatacg ggaaatagag cagttgcgca aacgtaaccg gcgttccgcc
     2041 caggcgggta gtcccaggat agtactgacc agacagccca acgcgatacc gtgactgacc
     2101 aataaaggtc ggctgccctg cggtagctcc agacaggacg ccagcgcggc atgaacgcga
     2161 tcgctcaact cctgcatcga ttccccacca ggaatgcggc catcctgcgt gccgttgacc
     2221 agctgacgac gccagccctc ttcttcttcc gtcagcgaat cgatctggcg cttttccagc
     2281 acgcccatat ccagctcgcg caggcggaag tcaaaggtaa tatcacaccc gcacgcctgg
     2341 gcgataatct ccgccgtgcg ttttgtgcgg cctaaatcgc tgctgatgat atgggtgatg
     2401 ccgaggctgc gggcgcgttc tcctacctgc atggcctgct gctctccttt tgccgtcagg
     2461 ggactgtccg attggccctg aatacgtcgc tcggcgttcc actgcgtttc accgtggcga
     2521 acaaggtata cctgtaacat gtttttttcc gttatactgc gataaatttt taaaactgag
     2581 cttaattatg caccaggtta tctctgcgac caccaatcct gccaaaattc aggcaattct
     2641 acaggcattt gaagagattt tcggcgaagg atcgtgccat attacacccg tcgccgtcga
     2701 gagcggcgta ccggagcagc ccttcggaag cgaggaaacg cgtgctggcg cacgaaatcg
     2761 cgtgggtaat gcgcgacgcc tgcatccaca agctgatttc tggattggtc gcaaagaggg
     2821 cgccattggc gtatttaccg ccggaaaatt aacgcgctcc agcgtttact accaggcggt
     2881 gatcctggcg ctcagcccgt ttcataacgc ggtgtatcga taattatttg cgctatgttg
     2941 taggcctgat aagcacagcg ccatcaggca tttcgcggcg atgttgccgg atggccgctt
     3001 cgtcttatcc ggcctacgag caaatcaggc gcttttcagc agtatctgct caagccaatg
     3061 acgcagttca accggcgcgg atttcaggct gtttgacccg cgtgtgatgg tagcgatgcc
     3121 cgcccccagc tcggttttca actcgcgctg gctcatttcg ccacgcagca actcctcaat
     3181 aatgcgcacg cgcgttccca gcgcttcacg ctcgtccggc gtaagcatca gttgtaataa
     3241 aggcagatgc agatcctctg catatgcctg acggagtaac tccacaaaac gaagccactc
     3301 ctgattacgt tgttcggcga tagccgatga ataaggggaa tgctgggtca tgttataccg
     3361 ccgtttgtac tgttacacga gtacaaatga taacataacc cgtctgcatt aataccgtcg
     3421 ctgccactca gagtcgctca ttaaggcctc tttctgtccc ataaagtggc gatagtaagc
     3481 gtcataggcc agaacgtttt tcacgtagcc gcgcgtttcc gaaaagggaa tgctttcgac
     3541 aaacgctacg gcatcgatac gcccggcgct attgccaagc caggtgcgca cgcgtcccgg
     3601 cccggcgtta tacgccgccg atgcaaaaat gcggttatta ccaaactgct gatagacata
     3661 ctgcaaatag ctggtgccaa tgttgatgtt ggtctccggc tccagcagtt ggccggggcc
     3721 gcggtagtcc ggaatcgaaa acattttcac cgtatgggtg gccgttcccg gcataatctg
     3781 cattaaaccg ctggccccta ccggtgattt tactttcggg ttccaggcgc tctcctggcg
     3841 ggcaatcgcc atggcatagc tttgtgagat atcttttccg cgggtatagc gggtaaaaag
     3901 atcgttatac gccagcggga aacgctcctc cagatgatcc cacagttttc cggcgatcgt
     3961 cgcctgtacg ctcagatccc accagtgctg gttaaacgca tagcgcgcca gctgcgcctg
     4021 ttcagattta ctacggcttt ttaccagatt cgcccattcg ctgcgcgccg tgttatccag
     4081 gttccagtac atcagctccc gtacacgcgc catctccggc ccctgcgtca acgcgctgtt
     4141 tacgttggcg ggcgctttat cgattttaag cgtgtactct tcgcctaaac gctgcgccgc
     4201 gaccatcgga taaaaaccgc gcttctgcat taaagcatga aggatctctt tcgcttcggc
     4261 gtcacgaccg cgctccagca ataaatccgc ctgccagtaa cgccactcgt ctttctcttt
     4321 cgcctccatc ggcaggcggg caagccaggt attgagaccg cgacgatcgc ccatccccag
     4381 cgccatacgc acgcgccgct cgataagcga cgtcgattgc gagcgcataa tcgcgtcatc
     4441 gcgccatttc gcctgcgcat cggtcacatc gttgcccatc agtcgccagg caacgatatc
     4501 gcgcagcgcc tgcgtttgtt cctcattaag tttctgcgcc tgtaccagcg aggggatcat
     4561 cagacgcgca ttttccgcgt cctggcgggc gacgctggca aacgcgactt ccgccatctg
     4621 gcgggtaaaa tcggtggcgc cggtggtgcg tgcaaaggtc aacacgttat tagggtcatt
     4681 agcgagggta atgatcgctg aggcgatcgt ttgatattcc gccggcatct gtccggccag
     4741 caccgtaacc agccccgtat ttccggcttt catcgccagc cgaatacgtt ccagatacgc
     4801 cagcgggtct tgcttgccgg aggcccgcca gacgctgaac agtttatcgc aggcattcgg
     4861 ctgacttttg ccggtcagcc aaaggtcttt cgcgccctgc caggccgctt ccgtttgccc
     4921 ggtactccat ttcgcgtagt aatagttaca ttgcgcttcc gtggtgccgg gtttctccgg
     4981 gctaaacgcc agcaagccgc gccagtcttc acgacgcgcc agctcattga cgaagcgcga
     5041 ttgcagcgta cgcgcaggcg gaagcgtagg attggcgcgc acaaactgcg tgacggcaat
     5101 cgccggttgg ttcatcaaat cgtcggtgat cttacggtat tccagatacg ggtagagcgg
     5161 ataatctttc agacccggca tcatctgctc taccacatcc atctggcggt tgtcccaggc
     5221 ctgcttaatc tgcgcatagc ggttacgctg ctcttccagt gagtcggccc gcgcgaggtg
     5281 acaaaaggtc aacaggcata cgctggcggc gacgagacgc cagacaaatg gtttggctct
     5341 atccacaagc acttcctcaa ttgttatcca atgcagcatc atgccgcgta atgaatttat
     5401 gctaaccagt catagccatt tgcgccacgt tacggacact tttttacttt tattgcgagt
     5461 gcgatctgct ggctgggctt aggcagggaa aaaggctaca cttcgccttt gaaatctatt
     5521 caccatcacg ataaacatag aggcgaagtc caacgtggct caattcgttt ataccatgca
     5581 tcgtgtcggc aaagtggttc cgccgaaacg tcatattctg aaaaacatct cgctgagctt
     5641 cttccctggc gccaaaatcg gcgtgctggg ccttaacggc gccggtaagt ctaccctgct
     5701 gcgcatcatg gcgggtctcg ataaagatat cgagggcgaa gcgcgcccgc agcccggcat
     5761 taagattggc tacctgccgc aggaacctca gctaaacccg gaacacacgg tacgcgagtc
     5821 gattgaagag gccgtttcgg aagtggttaa cgccctcaaa cgtctggatg aagtgtacgc
     5881 gctgtacgcc gatccggatg ccgacttcga caagctggcc gcagagcagg gccggcttga
     5941 agagattatc caggcgcacg acggtcataa cctgaacgtg cagcttgagc gtgctgctga
     6001 cgccctgcgt ctgccggact gggatgccaa agtcgaaaaa ctgtccggcg gcgagcgccg
     6061 ccgcgtggcg ctgtgccgtc tgttgctgga aaagccggac atgctgctgc tcgacgaacc
     6121 caccaaccac ctggatgccg aatctgttgc gtggctggaa cgtttcctgc acgacttcga
     6181 aggcaccgtc gtggcgatta cccacgaccg ttacttcctc gataacgtcg ccggctggat
     6241 tctggagctt gaccgcggcg aaggtattcc gtgggaaggc aactactcct cctggctgga
     6301 gcagaaagat cagcgtctgg cgcaggaagc gtctgccgaa gcggcgcgcc gtaaatccat
     6361 tgagaaagag ctggagtggg tgcgtcaggg cgcgaaaggc cgtcagtcga aaggtaaggc
     6421 gcgtctggct cgctttgaag aactgaacag cgttgagtat cagaaacgta acgaaaccaa
     6481 cgaactgttt attccaccag gaccgcgtct gggcgacaaa gtcattgaag tcagcaacct
     6541 gcgtaaatcc tacggcgacc gcgtactgat cgacgacctg agcttctcgg taccgaaagg
     6601 cgctatcgtc gggatcatcg ggccaaacgg cgtgggtaaa tcgaccctgt tccgcatgat
     6661 gtccggtcag gagcagcctg atagcggcac cattacgctg ggtgaaaccg tcaagctggc
     6721 ctcggtcgat cagttccgcg acgcgatgga caacagcaaa accgtctggg aagaggtgtc
     6781 cggcgggctg gatatcatga agatcggcaa caccgaaatg ccaagccgcg cctatgtagg
     6841 ccgctttaac ttcaaaggcg tcgatcaggg caaacgcgtt ggcgaattgt ccggcggtga
     6901 gcgtggtcgt ttgcatctgg cgaagctgct gcaggtgggc ggcaacgtcc tgctgctcga
     6961 cgaaccgacg aacgacctgg atatcgaaac cctgcgcgcg ctggaaaacg ccctgctgga
     7021 gttccctggc tgcgcgatgg ttatctcgca cgaccgttgg ttccttgacc gtatcgccac
     7081 ccacattctg gattatcagg atgaaggtaa ggtggaattc ttcgaaggta actttaccga
     7141 atacgaagag tacaagaaac gcactctggg cgccgaggcg ctggagccga agcgtatcaa
     7201 gtacaagcgt attgccaaat aaacgtctga atgccgggtg gcgcttgcgc ttacccggcc
     7261 tacaaaccca gcgattccaa tacgttgtga aactgtaggc ctgataagac gcggtaagcg
     7321 tcgcatcagg cattggttct tatccctgct cgcccatcat ctctttcacc agttccacac
     7381 agcgcaaaaa gcggccatcg taatcagcct ctttaacgtg aacgaactca atgttgtttt
     7441 ctttcagcat ctcgaccagc aggttctgga acgctttgcg atccactgaa ctgcccaggc
     7501 ttcgcagtcc gtcagctatc cacggcgtat tattctccag caaaatcacc aggtcgaagc
     7561 gatactcgtc gatcagcgcc tggacaaacg gatgctcgcg cccttcgtat tttttgcaaa
     7621 atgcctgggt ggtgacgaaa tcggtatcga taaacgctac tttattcgca tatttcactg
     7681 caaaatcaat atattgcgca tgacccagcg caattttatc gtagtcggaa tactgtaacg
     7741 ccatctcatc gccgcccaga tgcgaaaaga catagtcgcg gccatattcc caggcgctgg
     7801 tggtattaaa aatattggcg agcttattga ccagcgtaga cttgccgctt gattccccgc
     7861 ccagaatcgc gacggtacgc acgaaaaacg gcttcacttc ggtaggaata tattcccagt
     7921 aacgaaacgg attttcgcgg atttgcgccc cgctgatatt cataaacgtg cgttcaggat
     7981 cgaccagcac cgtctcaatc cctaaatgct ccaggtactg cggcgcatca gcctcttcgg
     8041 aagtgtagat ccagctcggc tgtattccct tctctgccat aaacgcttta atgccgttgc
     8101 tccagacgtc ccagccatgc ggataaggtt ccatcccctc ttcattaaag gcgtggatgc
     8161 gaatattttt ttggtatttg aaggtttgca gcaaccagcg caggcgatcc gacacggtgg
     8221 gctgctgcga catggcgcta tcttcaaaca gcccgcggtc gcgcgtatcg tcatatccca
     8281 taatgatgtg caactcatcc acctggctac aggcacgctg gatcaagtag atgtgcccgg
     8341 tatgcaatgg ataaaattta ccgaacacca cgccaatgtt tttctgtcgg cggggaaact
     8401 ccagcccgag aaaacggtgt agcgcctcca gtttttgcgc gctggggctt ttgattttgg
     8461 cgttaagtaa ctgactcaga taccccttgg tcataccgct ggcgtcagcc acctgttgca
     8521 gagtgcaacc ttgctgctta atcgcggttt tgagatagtc gaacgatgac acaagagcct
     8581 cctgctggaa aaatcgcata acactgcctg acggcgcttc gcttatcagg cctacaacat
     8641 caatccgtat caatccgtag gccggataag acgcattgcg tcgccatccg gcaaattata
     8701 caacatcact acatacagag aattataagt cgtcaaacac gcttaacgca tctgcgagct
     8761 ttttaacacc gaacacctgc attccttccg gcggcttttt cggtacgttg gcggcaggca
     8821 caatcgcccg acgaaaaccg tgtttcgccg cctcggaaat acgctcctgc ccgctcggca
     8881 ccggacgaat ctcgcctgcc agccccactt cgccaaacac caccagatcc tgcggcaacg
     8941 gcctgtcacg caggctggag accatcgcca gcagtaaagc cagatccgcg ctggtttcgg
     9001 tgactttcac gccgccgacc acgttgacga agacgtcctg atccgacatt tgcagaccgc
     9061 cgtgtcggtg cagcaccgcc agcaggatag ccagacggtt ttgttccaga ccgaccgcca
     9121 cgcgtctggg gttcgccatc atcgagtgat cgaccagtgc ctgaatctcc accagcaacg
     9181 gtcgcgtacc ttcccagacg accatcactg agctgccgga agtgacctca tcgccgcggc
     9241 ttaaaaagat ggcggacgga ttgctcactt cgcgcaaccc ctgttcggtc atagcgaaga
     9301 cgcccagctc attgactgcg ccaaagcggt ttttgtggct gcgcagcgtg cggaaacgag
     9361 aatcggcgtc gccgtcgagc aatactgagc aatcaataca gtgttccagc actttcggcc
     9421 ccgccagcga cccgtctttg gtgacgtggc cgaccatcac gatcgcc
//
LOCUS       DAGWFR010000157         9452 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.159, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000157 DAGWFR010000000
VERSION     DAGWFR010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 9452)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9452)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9452
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.159"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..245
                     /locus_tag="MOX77_003695"
     CDS             <1..245
                     /locus_tag="MOX77_003695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HCA3359118.1"
                     /translation="CGGGSRNPLVMARLAALLPGIEVSTTDKAGISGDDMEALAFAWL
                     AWRTLAGLPGNLPSVTGATEASVLGAIYPANPITQS"
     gene            333..662
                     /gene="mliC"
                     /locus_tag="MOX77_003696"
                     /pseudo
     CDS             333..662
                     /gene="mliC"
                     /locus_tag="MOX77_003696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460410.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="C-type lysozyme inhibitor"
     gene            721..1377
                     /gene="pdxH"
                     /locus_tag="MOX77_003697"
     CDS             721..1377
                     /gene="pdxH"
                     /locus_tag="MOX77_003697"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005127173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HCA3359119.1"
                     /translation="MSDNNQLQQIAHLRREYTKGGLRRRDLPAEPLTLFERWLGQACD
                     ARLADPTAMVVATVDDKGQPYQRIVLLKHYDEKGLVFYTNLGSRKAHQIEHNPRISLL
                     FPWHMLERQVMVTGKAERLSTLEVVRYFHSRPRDSQIGAWVSKQSSRISARGILESKF
                     LELKQKFQQGEVPLPSFWGGFRVSIEQMEFWQGGEHRLHDRFLYQRDDGAWKIDRLAP
                     "
     gene            1504..2778
                     /gene="tyrS"
                     /locus_tag="MOX77_003698"
     CDS             1504..2778
                     /gene="tyrS"
                     /locus_tag="MOX77_003698"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HCA3359120.1"
                     /translation="MASSNLIKQLQERGLVAQVTDEDALAERLAQGPIALYCGFDPTA
                     DSLHLGHLVPLLCLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVA
                     KIRKQVAPFLDFDCGENSAIAANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQR
                     LNRDDQGISFTEFSYNLLQGYDFACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQN
                     QVFGLTVPLITKADGTKFGKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFT
                     FMDIEEINALEEEDKNSGKAPRAQYVLAEQVTRLVHGEEGLVAAKRITECLFSGSLSA
                     LSEADFEQLAQDGVPMVEMEKGADLMQALVDAELQPSRGQARKTIASNAVTINGEKQS
                     DPEYIFNDEDRLFGRYTLLRRGKKNYCLICWK"
     gene            2838..3497
                     /gene="pdxY"
                     /locus_tag="MOX77_003699"
                     /pseudo
     CDS             2838..3497
                     /gene="pdxY"
                     /locus_tag="MOX77_003699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460413.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal kinase PdxY"
     gene            complement(3527..4132)
                     /gene="gstA"
                     /locus_tag="MOX77_003700"
     CDS             complement(3527..4132)
                     /gene="gstA"
                     /locus_tag="MOX77_003700"
                     /EC_number="2.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione transferase GstA"
                     /protein_id="HCA3359121.1"
                     /translation="MKLFYKPGACSLASHIILREIGKDFTLDGVDLAKKRLENGDDYL
                     AVNPKGQVPALLLDDGTLLTEGVAIMQYLADSVPDRQLLAPVSSLARYHTLEWLNYIA
                     TELHKGFTPLFRPDTPETLKPAVRAGLEKKFQYVDESLSDDQWICGQRFTIADAYLFT
                     VLRWAYGVKLNMDGSTHIESYMQRVAKRPTVAAALKAEGLN"
     gene            complement(4237..5742)
                     /gene="dtpA"
                     /locus_tag="MOX77_003701"
     CDS             complement(4237..5742)
                     /gene="dtpA"
                     /locus_tag="MOX77_003701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide/tripeptide permease DtpA"
                     /protein_id="HCA3359122.1"
                     /translation="MSTANKKPTESVSLNAFKQPKAFYLIFSIELWERFGYYGLQGIM
                     AVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKILGTKRVIMLGAVVLAIGY
                     ALVAWSGHDAGIVYMGMAAIAVGNGLFKANPSSLLSTCYAKDDPRLDGAFTMYYMSVN
                     IGSFFSMLATPWLAARYGWSTAFALSVVGMLITVVNFAFCQRWVKSYGSKPDFEPINF
                     RNLLLTIVGIVVLIAVATWLLHNQDIARMVLGVIALGIVIIFGKEAFSMHGAARRKMI
                     VAFILMLQAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAFEPEQYQALNPFWIITGSP
                     ILAAIYNRMGDTLPMPMKFAIGMVLCSGAFLILPLGAKFANDAGIVSVNWLIASYGLQ
                     SIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGANIIGGYVANLMAVPSDVTDP
                     LMSLEVYGRVFMQIGIATAVIAVLMLLTAPKLNRMTQDDDTAEKGSKAATV"
     gene            complement(6343..6978)
                     /gene="nth"
                     /locus_tag="MOX77_003702"
     CDS             complement(6343..6978)
                     /gene="nth"
                     /locus_tag="MOX77_003702"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HCA3359123.1"
                     /translation="MNKAKRLEILTRLRDSNPHPTTELNFTSPFELLIAVLLSAQATD
                     VSVNKATAKLYPAANTPAAMLELGVEGVKSYIKTIGLFNSKAENVIKTCRILMDKHNG
                     EVPEDRAALEALPGVGRKTANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVE
                     EKLLKVVPNEFKVDCHHWLILHGRYTCIARKPRCGSCLIEDLCEYKEKVDI"
     gene            complement(6978..7670)
                     /locus_tag="MOX77_003703"
     CDS             complement(6978..7670)
                     /locus_tag="MOX77_003703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit E"
                     /protein_id="HCA3359124.1"
                     /translation="MSEIKDIVVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLA
                     TTLVLTLTNLTVSALRRWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFI
                     PLIVTNCIVVGRAEAFAAKKGPWLSALDGFSIGMGATGAMFVLGSLREILGNGTLFDG
                     ADSLLGGWAKVLRVEIFHTDSPFLLAMLPPGAFIGLGLMLAVKYLIDEKMKKRRAETA
                     PSAVPAGETGKV"
     gene            complement(7673..8293)
                     /gene="rsxG"
                     /locus_tag="MOX77_003704"
     CDS             complement(7673..8293)
                     /gene="rsxG"
                     /locus_tag="MOX77_003704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxG"
                     /protein_id="HCA3359125.1"
                     /translation="MLKTIRKHGITLALFAAGSTGLTAVINQMTKSTIHEQALQQQHA
                     LFDQVLPPDRYNNNLQESCYLVDAPALGKGTHRVFIARKDDKPVAAIIEATAPDGYSG
                     AIQLIVGADFNGTILGTRVTEHHETPGLGDKIERRLSDWITHFSGKTISGENDTHWAV
                     KKDGGDFDQFTGATITPRAVVNAVKRAGLYAESLPAQLPHLTACGE"
     gene            complement(8297..9355)
                     /gene="rsxD"
                     /locus_tag="MOX77_003705"
     CDS             complement(8297..9355)
                     /gene="rsxD"
                     /locus_tag="MOX77_003705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxD"
                     /protein_id="HCA3359126.1"
                     /translation="MVFRIASSPYTHNQRQTSRIMLLVLIAALPGIAAQTWFFGWGTL
                     FQIVLAAITALVAEAIVLRLRKQSVASHLQDYSALLTGLLLAVSIPPLAPWWMVVLGT
                     GFAIIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPYEIAATTPDILDTLR
                     MIFSGHTASGGDMTLLRIGIDGISQATPLDTFKTSLRAGHSVEQIMQYPIYSGALAGV
                     GWQWVNLAWLVGGVFLLWQKAIRWHIPVSFLLTLALCAALGWLFSPATLASPQLHLLS
                     GATMLGAFFILTDPVTASTTNRGRLIFGALAGVLVWLIRSFGGYPDGVAFAVLLANIT
                     VPLIDYYTRPRVYGHRKG"
BASE COUNT         2352 a         2416 c         2523 g         2161 t
ORIGIN      
        1 tctgtggcgg cggaagccgg aatccgttag tgatggcccg tctggcggcg ctgttgcccg
       61 gtatcgaggt ttcgaccacc gataaggcgg ggatcagcgg cgatgatatg gaagcgctgg
      121 cctttgcatg gcttgcctgg cgaacgctcg cgggcctgcc gggaaattta ccttccgtga
      181 cgggggctac agaagccagt gttttaggcg ctatttaccc ggctaaccca ataactcaga
      241 gttaactgaa tttttcccgg accctatatc ggtaaactag caaggtcagg aaggggcgtt
      301 tgcccttcca gaagcaggag agctttcggg atatgcctat gaaaaagatc gcaataatgt
      361 ttttacctgt gctgctgacc ggctgtagcg tttatcaaca atttgttgaa cgtatgcaaa
      421 cggatacgct ggaatatcag tgtgatgaga agccgcttac cgttaaagcc aataacccgc
      481 gtgaagaggt cagttttgtt tatgacaata agctgctgac cctgaagcaa ggaatctcgg
      541 cctcgggcgc gcgttatacc gacgggattt atgttttctg gtcgtaaggc gagagcgcca
      601 cggtctataa acgagacaga attgtgctta ataactgtca gttacaaaat ccgaagcgtt
      661 gagattttca gtatgggggc gcacaatagc gccacccact gattatttct gatcaacgcc
      721 atgtctgata acaaccaatt gcagcagatc gcgcatctgc gccgtgaata cacgaaaggc
      781 ggcttgcgtc gccgcgattt acccgctgaa ccgttaacct tatttgagcg ctggcttggg
      841 caagcgtgtg acgccagact ggccgatcca acggcaatgg tcgtggcgac cgtagatgac
      901 aaggggcaac cgtaccagcg tatcgtattg ctcaaacatt atgatgaaaa aggcctagtc
      961 ttttatacta acctgggaag ccgcaaggcg catcaaattg agcacaatcc gcgtatcagt
     1021 ctgttatttc cctggcatat gcttgaacgc caggtgatgg tgacaggcaa agccgagcgt
     1081 ctctccacac ttgaggtggt gaggtatttc cacagccgtc cgcgcgacag ccagatcggc
     1141 gcatgggtct ctaaacaatc cagccgcatt tccgcgcgcg gtatcctcga aagcaaattc
     1201 ctggagctca agcagaagtt tcaacagggc gaagtgccgt tacccagctt ctggggtggt
     1261 tttcgcgtga gtatcgaaca gatggagttc tggcagggcg gcgaacatcg tctgcacgat
     1321 cgctttttat accaacgcga cgacggcgca tggaaaatcg accgtcttgc gccctaaaga
     1381 tgcaaaaatc ttgttttaag cactggtgcg gatgaatccg ccgttttatg ctatgtctct
     1441 ttcgcgtctg gcgaaaagtc gtgtaccggc aaaggtgcag tcgttttata catggagatt
     1501 ttgatggcaa gcagtaactt gattaaacaa ttgcaagagc gggggctggt agcccaggtg
     1561 acggacgaag acgcgttggc agagcgactg gcgcaaggcc cgatcgcgct ctattgcggc
     1621 ttcgatccta ccgctgacag cttgcatttg gggcatctgg ttccattgtt atgcctgaaa
     1681 cgcttccagc aggcagggca caaacctgtt gcgctggtag gcggcgcgac cggtctgatt
     1741 ggcgacccga gctttaaagc cgccgagcgt aaactgaaca ctgaagagac cgttcaggag
     1801 tgggtggcga aaattcgtaa acaggttgcc ccattcctgg actttgattg cggcgaaaac
     1861 tccgccatcg cggccaataa ctatgactgg ttcggcagca tgaatgtgct gactttcctg
     1921 cgcgatatcg gtaaacattt ttccgttaat cagatgatca acaaagaagc ggtgaagcag
     1981 cgtctgaacc gtgacgatca gggtatctct ttcacggagt tctcttataa cctgctacag
     2041 gggtacgact tcgcttgtct gaataaactg cacggcgttg ccttacagat tggcggttct
     2101 gaccagtggg ggaacatcac ttccggtatc gacctgaccc gtcgcctgca ccagaatcag
     2161 gtatttggtt tgaccgttcc gctgattacc aaagctgacg gcacgaaatt cggtaaaacc
     2221 gaaggcggcg ctgtctggct ggatccgaag aaaaccagtc cgtacaaatt ctaccagttc
     2281 tggattaaca ccgcagatgc cgatgtttat cgcttcctga aattcttcac ttttatggac
     2341 attgaggaga tcaatgccct ggaagaagaa gataaaaaca gcggtaaagc gccgcgcgcg
     2401 cagtatgtac tggccgagca ggtgacgcgc ctggttcatg gtgaagaggg gctggtcgcg
     2461 gcgaaacgga tcactgaatg cctgttcagc ggttcactga gcgcgctgag cgaagctgac
     2521 tttgagcagt tggcccagga cggcgtaccg atggttgaaa tggaaaaagg cgccgacctg
     2581 atgcaggcgc tggtagacgc cgaactccag ccgtcacgtg gtcaggcgcg taagactatc
     2641 gcctccaacg ctgtcactat caatggtgaa aaacaatccg atcctgaata catctttaac
     2701 gatgaggacc gtctgtttgg ccgctatacc ttattacgtc gcggcaaaaa gaactattgt
     2761 ctgatttgct ggaaataagg cattaagtaa cagggagtga gaaatcactc ccttattttt
     2821 gatgttcagg taaaaaaatg aagaatatcc tcgctatcca gtcccatgtt gttttcggac
     2881 atgcgggcaa cagcgccgcc gaatttccca tgcgccgtct tggcgcgaat gtttggccgc
     2941 tgaataccgt tcagttttct aaccacacgc aatatggtaa atggaccggc tgtgtcatgc
     3001 cgcccagcca tctgactgag attgtccagg ggattgcgga cattggccag ttagcgcact
     3061 gcgacgccgt acttagcggt tacctgggat ctgccgagca gggagaacac attctcggta
     3121 ttgtgcgcca ggttaaagca gcaaatccgc aggcaaaata tttctgcgat cccgtgatgg
     3181 ggcatccgga aaagggttgt atcgtggcgc ctggcgtcgc agagttccat gtgcgttatg
     3241 cgctacccgc cagcgatatt atcgcgccta acctgattga actggaaatt ctcagcaaac
     3301 atagcgtgaa taatgtgaat gacgccgtgc aggtggcgcg agaactgatt gctcaggggc
     3361 cagaaattgt actggtaaaa catctcgccc gcgccggtta cagttcagaa cgctttgaaa
     3421 tgctgctggt gacagcgcag gaagcctggc atattagccg tccgctggtg gatttcggct
     3481 cacgtcagcc ggttggcgct acagcgagct atccggcaac atgacattaa ttcagtcctt
     3541 ccgctttaag cgctgccgca acggtcggtc tttttgcgac acgctgcata taactttcaa
     3601 tatgcgttga cccgtccata ttcagtttta cgccataggc ccaacgcaat acggtaaaca
     3661 gataagcgtc tgcaatggta aaacgctggc cgcaaatcca ctggtcgtct gaaagcgact
     3721 catccacata ctgaaatttc ttttccagac cggcgcgaac ggcgggttta agtgtttccg
     3781 gcgtgtcagg gcggaacagc ggggtaaagc ctttatgcag ttccgttgca atatagttga
     3841 gccattccag cgtatgatag cgagcaagac tacttaccgg cgccagaagc tggcggtcgg
     3901 gaacgctgtc ggcgaggtac tgcataatgg cgacgccttc agtcaacagt gtgccgtcat
     3961 ccagcagcag agccggaacc tgtcctttag ggttgactgc caggtaatca tcaccgtttt
     4021 ccaggcgttt tttcgcgaga tcgacgccat caagcgtaaa gtctttgcca atttcgcgca
     4081 ggataatatg ggaagcaaga gagcaggcac ccggtttgta gaacagtttc atcggtaact
     4141 cctttttgct gaggtttaaa gtatggtagt gcggggacga gcaaaaaaaa agccgctaac
     4201 gcacagttag cggcctgaat gttgtttccc ggaaaattaa actgtagcgg ctttagagcc
     4261 tttttcagcg gtatcatcgt cctgggtcat acggttcagc ttaggcgctg tcagcagcat
     4321 caggacggcg ataacggcgg ttgctatgcc aatctgcata aatacgcgac catagacttc
     4381 tagggacatc agtgggtcag tcacgtcgct cggcacagcc atcaggttgg cgacataacc
     4441 gccgatgatg ttagcgcctg ccgttgtcag gaaccagcta cccatgatga agcccatcag
     4501 acgctgcgga accaactgtg cgaccattgc caggcccaga ccggagatca tcagctcacc
     4561 gatactttgc aggccgtagc ttgcgatcag ccagtttacg gatacgatgc cggcatcgtt
     4621 cgcaaatttg gcgcccagcg gcagaatcag gaacgcgccg gaacacagca ccataccaat
     4681 ggcgaatttc atcggcatcg gcagcgtatc gcccatcctg ttataaatag cggccagaat
     4741 cgggctgccg gtaatgatcc agaatgggtt cagcgcctga tactgttccg gttcgaacgc
     4801 gataccgaga atagagtgct cgacgttacg aatggcaaag aagttcagcg acgtcggcat
     4861 ctggctgtac agtacgaaga agataatcgc ctgcagcatc aaaataaagg cgacgatcat
     4921 tttacggcga gccgcgccgt gcatggaaaa cgcttcttta ccgaaaataa tgacgatgcc
     4981 aagagcgatt acgcccagca ccatacgcgc gatatcctgg ttgtgcagca gccaggtggc
     5041 gaccgcaatc agaacgacaa tacccacgat tgtcagcagc agattacgga agttgatcgg
     5101 ttcaaagtcg ggtttggaac cgtagctttt cacccagcgc tggcagaaag caaagttaac
     5161 gacggttatc agcataccga cgacgctaag cgcaaacgcg gtgctccagc cataacgcgc
     5221 cgccagccac ggcgtcgcca gcatagagaa gaaggagccg atgttgacgg acatataata
     5281 catcgtaaat gcgccgtcga gacgcggatc gtccttcgcg taacaggtag acagcaggga
     5341 agacgggtta gctttaaaca gaccattacc cacagcgata gccgccatgc ccatatagac
     5401 gatgccagcg tcatgaccag accatgcgac cagcgcataa ccgatagcca gcaccacggc
     5461 acccagcata ataacgcgtt tggtgcccag aattttatca cctaaccaac cgccaatggc
     5521 gaccaggccg tacaccagcg cactgaagga agagaaaagg gtgatggaat ccgcttctga
     5581 catacccagt tgttttacca ggtagacggc cataatgcct tgcaggccgt aataaccaaa
     5641 acgctcccat aactctatcg agaagattag atagaacgcc ttcggttgtt tgaaagcgtt
     5701 caaactgacg ctttcagttg gttttttgtt tgcagtagac acttttacct cttttttacg
     5761 ccccgtatta acagggattg tctggcgcgt gatgagtcag actcatccgt ccgattgtta
     5821 tattggaggg gaaacggcag gtaatgttca ctatctttcc tctccagaca agagctttgt
     5881 aataatctgt tacatataac tcttctggtt gaatcgtccg atgtcagaaa tgttatccag
     5941 cgttaaattt cttcatttga agaatggcag atttttacac tgcaaaaagg ccattagttt
     6001 ggataaaagg cgatatcttc tgctatttaa ggtgaaaagc agtgatatag gccattatct
     6061 gaaaaaatgg cagagtaatg ttttgtagtg aaaacggggc gtcagtctat ccggttgtaa
     6121 atgtaacctt aggtgtcatt aaatttcaca tgaagttatc aaagtgatcc tgatcacgga
     6181 tagatagaaa tttttgcgat taaaaaatga ttaacctgac gtggagggaa aacgaaagca
     6241 cattacatca gaaaaaggac agagactgga atgattgatg gctaaaatag atccaggccg
     6301 aaggtgggag cgcgctggta tgacgggcgc actccgacca tatcaaatat cgactttttc
     6361 tttgtattcg caaaggtctt caatgaggca ggagccgcag cggggttttc gggcgataca
     6421 ggtatagcgg ccatgcaaaa ttaaccagtg atggcagtcc actttgaact cattcggcac
     6481 cactttcagt aacttctctt ctacctgctc gacattttta cccggcgcga actgtgttcg
     6541 gttgcataca cgaaatatat gcgtatcaac ggcgatggtc ggccagccga aggcggtatt
     6601 tagcaccacg ttagcggttt tacgccccac gccgggaagc gcttccagcg ccgcccgatc
     6661 ctccggcact tcgccattat gcttgtccat taaaatacgg caggtcttaa tcacgttttc
     6721 cgctttactg ttaaataagc cgatggtttt gatataggat ttcacgcctt ctacgcccag
     6781 ttccagcatc gcggctggcg tattggcggc cgggtaaagt ttggcggtcg ccttgttcac
     6841 gctgacgtcg gttgcctgcg cggaaagcaa cacggcaatc agcaactcaa acggcgacgt
     6901 gaaattgagt tccgttgtgg ggtgcggatt gctgtcgcgc aggcgcgtca gaatttccag
     6961 cctttttgct ttgttcatca gactttccct gtttcaccgg ccggaacagc ggaaggcgcg
     7021 gtttcggcgc ggcgtttctt cattttttca tcaataagat attttaccgc cagcatgagt
     7081 cccagaccga taaacgcgcc tggcggcagc atcgccagca ggaaaggcga gtcggtgtga
     7141 aatatctcga cccgtaatac ttttgcccag cctcccagca ggctatccgc gccatcgaaa
     7201 agcgtaccat tcccgaggat ctcgcgcagt gagcccagca cgaacatcgc gcctgtcgcg
     7261 cccatgccga tggaaaaacc gtccaacgcg gaaagccacg gtcctttttt cgcggcaaac
     7321 gcttcggcgc gaccaacaac tatgcagttc gttacaatca gcggaataaa aatccctaaa
     7381 gactgataca gaccgaacgc atacgcattg atcagcatct gtactgcgct gaccaccgaa
     7441 gcaatgatca taacgtaaat cgggatacgg atttctgccg gcgtccagcg acgtagtgcg
     7501 gacaccgtaa ggttggtcag cgttaatacc agcgttgtgg cgagacccag ccccagagcg
     7561 ttggttgccg tagacgtcac tgccagtaaa gggcacaggc caagtagctg caccagagca
     7621 gagttatttt tccataaccc ctgaacaaca atgtctttta tttcgctcat ggctattctc
     7681 cacaggcggt taaatggggg agctgagcgg gcagtgattc ggcgtacagc ccggcgcgtt
     7741 taaccgcatt cactacggcg cgcggcgtta ttgtcgcccc ggtaaattga tcaaaatcac
     7801 cgccatcttt tttcaccgcc cagtgcgtat cattttcacc gctgatggtt ttaccgctaa
     7861 agtgggtaat ccagtcagac aaacggcgct caattttatc acctaaccct ggcgtctcat
     7921 gatgttccgt cacgcgcgtc cccaggatag taccgttgaa atctgcgcca acaataagct
     7981 ggatagcgcc ggaatagcca tctggcgcgg tggcctcaat gatggccgct acgggtttat
     8041 catccttgcg agcgataaaa acacggtgtg tgcctttgcc gagggcgggc gcatcgacca
     8101 gataacagct ctcttgcaga ttattattgt aacgatctgg cggcaatacc tgatcgaaca
     8161 gggcatgttg ttgttgcagc gcttgttcgt ggatggttga ttttgtcatc tgattaatca
     8221 ccgcggtcaa tcccgtagag cctgcggcaa aaagcgccag cgtaataccg tgtttacgaa
     8281 tcgttttcag catggtttat cctttgcgat gtccatagac gcgggggcgc gtgtagtagt
     8341 cgatcagagg aaccgtgata ttcgccaaca ggacagcaaa agcaacgccg tccggatagc
     8401 cgccgaagct acgaatcagc cacactaata ccccagccag cgcgccgaaa attaaacgtc
     8461 cacggttggt cgtggaggcg gtaaccggat ccgtcaagat aaaaaatgcg cccagcatgg
     8521 tggcgcctga cagcagatga agctgcggcg aggccagcgt agcgggcgag aaaagccaac
     8581 ctaacgcggc gcatagcgcc agcgtgagca gaaaactgac cgggatatgc cagcggatgg
     8641 ctttttgcca cagcaggaat acgccgccga caagccaggc gaggttaacc cactgccagc
     8701 ccacgccagc cagcgcaccg ctgtatatcg ggtactgcat gatttgctca acggagtgcc
     8761 cggcgcgcaa ggacgtttta aacgtatcca gcggcgtcgc ctggctgata ccgtcaatac
     8821 cgatacgtag tagcgtcata tcgccgccgc tggcggtatg cccgctaaaa atcatccgta
     8881 acgtgtccag tatatcgggc gttgttgcgg ctatttcata aggcggcaac cagcttgtca
     8941 tttgcaccgg aaaggaaatt aatagcacca cgtagccgat catggccgga ttaaaggggt
     9001 tttgtcccag cccgccatat aactgtttag cgataataat ggcgaatccg gttcccagca
     9061 cgaccatcca ccagggcgcg agcggaggga tgctgaccgc cagcaaaagc cccgtcaata
     9121 acgcggaata atcctgcagg tgactggcga ccgattgttt gcgcagtcta aggacaatgg
     9181 cttccgcgac gagcgccgtg atagcagcca gaacgatctg gaaaagcgtt ccccaaccaa
     9241 aaaaccacgt ctgcgcggca atccccggca gagcggcgat taataccagc aacatgattc
     9301 gcgatgtctg gcgctggtta tgggtataag gcgagcttgc gattctgaat accatttaat
     9361 cctcgttaac aacctgctgc tgtgctgctt tttttgcctg aacgcgagcg atagccgcag
     9421 caaccgcggc tttacgcggg tcggccggtt cg
//
LOCUS       DAGWFR010000158         9323 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.160, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000158 DAGWFR010000000
VERSION     DAGWFR010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 9323)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9323)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9323
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.160"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            106..1956
                     /gene="selB"
                     /locus_tag="MOX77_003706"
     CDS             106..1956
                     /gene="selB"
                     /locus_tag="MOX77_003706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenocysteine-specific translation elongation
                     factor"
                     /protein_id="HCA3359127.1"
                     /translation="MIIATAGHVDHGKTTLLQAITGINADRLPEEKKRGMTIDLGYAY
                     WPQPDGRVLGFIDVPGHEKFLSNMLAGVGGIDHALLVVACDDGVMAQTREHLQILQLT
                     GNLQLTVALTKADRVDEARISEVREEVLAALDNYGFADTVLFVTAANEGRGIAELRAH
                     LQQLPARLHAAQHRFRLAIDRAFTVKGAGLVVTGTALSGEVNVGDTLWLTGVNTPMRV
                     RSLHAQNQPTDHAYAGQRIALNIAGDAEKEQLNRGDWLLSDAPAGEAFSRVIVSLALH
                     APLSQWQPLHIHHAASHVTGRVSLLEGALAELIFDTPLWLADNDRLVLRDISARATLA
                     GARVVTLNAPRRGKRKPDYLHWLSTLADAQDDSAALAIHLERGAVNLPDFGWARQLNP
                     LGMRQLIEQHGFIQAGDNLLSAPVAARWQRKILDTLATYHEQHRDEPGPGRERLRRMA
                     LPMEDEALVLMLIERMRDEGLIHSHHGWLHLPDHKAGFSDEQQAVWQKVEPLFGDEPW
                     WVRDLAKETGTEEQLMRLVLRQAAQQGIITAIVKDRYYRNDRIVAFANMIRELDQERG
                     STCAADFRDRLNVGRKLAIQILEYFDRIGFTRRRGNDHLLRDALLFPQKE"
     gene            complement(2241..3122)
                     /locus_tag="MOX77_003707"
     CDS             complement(2241..3122)
                     /locus_tag="MOX77_003707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001188270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HCA3359128.1"
                     /translation="MQQYIGIDVGGTHVKYGVINSDGEELTHHQFDTPEDASTFTRKW
                     QDVVARCQQDYDIAAIGVSFPGHINPHNGHAAKAGALAYLDDVNLMELFSGLTDLPLV
                     VENDANCAALGEMWRGAGQHYDNLVCITIGTGIGGGIIVGRELYRGAHFHAGEFGVMP
                     VGNNGESMHKIASTSGLMASCRQALALPAEEMPPADVIFERMATDVHLREAVNDWARY
                     LSRGVYSVISMFDPGVVLIGGGISEQEKLYPLLTRHLETFEMWEALQVPIQPCQLGNQ
                     AGRLGAVWLAQQKLDRR"
     gene            3291..4829
                     /gene="aldB"
                     /locus_tag="MOX77_003708"
     CDS             3291..4829
                     /gene="aldB"
                     /locus_tag="MOX77_003708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase AldB"
                     /protein_id="HCA3359129.1"
                     /translation="MTNNPPSTRIQPSEYGYPLKLKARYDNFIGGDWVAPADGEYYQN
                     LTPVTGQPLCEVASSGKKDIDLALDAAHKAKDKWAHTSVQDRAAILFKIADRMEQNLE
                     LLATAETWDNGKPIRETSAADIPLAIDHFRYFASCIRAQEGGISEVDSETVAYHFHEP
                     LGVVGQIIPWNFPLLMASWKMAPALAAGNCVVLKPARLTPLSVLLLMEVIGDLLPPGV
                     VNVVNGAGGEIGEYLATSKRIAKVAFTGSTEVGQQIMQYATQNIIPVTLELGGKSPNI
                     FFADVMDEEDAFFDKALEGFALFAFNQGEVCTCPSRALVQESIYERFMERAIRRVESI
                     RSGNPLDSGTQMGAQVSHGQLETILNYIDIGKKEGADILTGGRRKELDGELKEGYYLE
                     PTILFGKNNMRVFQEEIFGPVLAVTTFKTMEKALEIANDTQYGLGAGVWSRNGNLAYK
                     MGRGIQAGRVWTNCYHAYPAHAAFGGYKQSGIGRETHKMMLEHYQQTKCLLVSYSDKP
                     LGLF"
     gene            complement(4947..6902)
                     /locus_tag="MOX77_003709"
     CDS             complement(4947..6902)
                     /locus_tag="MOX77_003709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 127 protein"
                     /protein_id="HCA3359130.1"
                     /translation="MNVLEVDLHKLTVSDPLLGQYQQLVRDVVIPYQWDALNDRIPEA
                     EPSHAIENFRIAAGQQTGDFYGMVFQDSDVAKWLEAVAWSLCQKPDPELEKTADEVIE
                     LVAAAQCDDGYLNTYFTAKAPQERWSNLAECHELYCAGHLIEAGVAFFQATGKRRLLD
                     VVCRLADHIDSTFGPGENQLHGYPGHPEIELALMRLYEVTEQPRYMTLASYFIGQRGA
                     QPHFYDEEYEKRGQTSYWHTYGPAWMVKDKAYSQAHLPISQQQTAIGHAVRFVYLMTG
                     VAHLARLSNDEGKRQDCLRLWKNMAQRQLYITGGIGSQSSGEAFSSDYDLPNDSVYAE
                     SCASIGLMMFARRMLEMEADSQYADVMERALYNTVLGGMALDGKHFFYVNPLEVHPKS
                     LKFNHIYDHVKPIRQRWFGCACCPPNIARVLTSIGHYIYTPRADALYINMYVGNSMEI
                     PVENGALKLRISGNYPWHEQVKIAIDSVQPVRHTLALRLPDWCPEAKVTLNGLEVEQD
                     IRKGYLHIRRTWQEGDTISLTLPMPVRRVYGNPLARHVAGKVAIQRGPLVYCLEQADN
                     GEELHNLWLPKESEFRVFEGKGLFAHKMLIQAEGEKQSAADAQHQALWHYDNAPSSRQ
                     PQTLTFIPWFSWANRGEGEMRIWINER"
     gene            7166..7978
                     /locus_tag="MOX77_003710"
     CDS             7166..7978
                     /locus_tag="MOX77_003710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HCA3359131.1"
                     /translation="MLELSITLPIKVQNGGLFISRGIGRHPARRLQSWEIIFVEKGCL
                     KIQEECVFCVEAGESLLLWPHRRHIGVEEFPADLKFYWLHFEVKAPDSDPRWLTHLSV
                     PQHTQVADPQALIALFRQFMNEQEKHQRSPALEFIVLLILQQLTVDARQNENAEAAGV
                     SLAWKAQQLIRTHYHLPLSSAVLAKELHCNVDYLGRVYRRVFHLTLTEAIHRQRVREA
                     EKLLISDARSLKEVAERCGFNDVGYFRQIFRKHTGLTPTAWKRRYSKEHVNS"
     gene            complement(8139..8834)
                     /gene="araD"
                     /locus_tag="MOX77_003711"
     CDS             complement(8139..8834)
                     /gene="araD"
                     /locus_tag="MOX77_003711"
                     /EC_number="5.1.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 4-epimerase"
                     /protein_id="HCA3359132.1"
                     /translation="MLEQLKAEVLAANLALPAHGLVTFTWGNVSAVDETRKLMVIKPS
                     GVEYEVMTADDMVVVEIASGKVVEGNKKPSSDTATHLALYRRYPQIGGIVHTHSRHAT
                     IWSQAGLDLPAWGTTHADYFYGAIPCTRLMTVEEINGEYEYQTGEVIIKTFEERGLDP
                     AQIPAVLVHSHGPFAWGKNAADAVHNAVVLEECAYMGLFSRQLAPQLPDMQPELLDKH
                     YLRKHGANAYYGQ"
     gene            complement(8828..>9323)
                     /locus_tag="MOX77_003712"
     CDS             complement(8828..>9323)
                     /locus_tag="MOX77_003712"
                     /EC_number="5.1.3.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 3-epimerase"
                     /protein_id="HCA3359133.1"
                     /translation="EHDEGTQQRFAEGLAWAVEQAAAAQVMLAVEIMDTAFMNSISKW
                     KKWDEMLSSPWFTVYPDVGNLSAWGNDVTAELKLGIDRIAAIHLKDTLPVTGDNPGQF
                     RDVPFGEGCVDFVSIFKTLHELNYRGSFLIEMWTEKASEPVLEIIQARRWIESRMQEG
                     GFTC"
BASE COUNT         2049 a         2520 c         2609 g         2145 t
ORIGIN      
        1 gcgcacgctg cctgtaccgg tcattggccg aatttatgat ggccgtttat ggctggatat
       61 gcgctgtctt gaagacgaaa gccggtttat ggagatgatg ctgaaatgat tattgcaact
      121 gccggacacg tagaccacgg taaaacgacg ttgctccagg cgattaccgg cattaatgcc
      181 gatcgcctgc cggaagagaa aaaacgcggg atgactatcg atctgggcta cgcctattgg
      241 ccgcagccgg atggtcgtgt gctgggcttt atcgatgtgc ctgggcatga aaaattcctc
      301 tctaacatgc tggcgggcgt aggcggtatc gatcacgctt tgctggtggt cgcctgtgat
      361 gacggcgtta tggcgcaaac gcgcgagcat ttacagatcc tacagctgac gggcaatctc
      421 cagctcaccg tcgcgctgac caaagccgat cgcgtggacg aggcgcgtat cagcgaagta
      481 cgtgaagagg tgctggcggc gctcgacaac tatggcttcg ccgataccgt tttatttgtc
      541 accgccgcca atgaaggacg cggtattgca gaacttcgcg ctcatttaca gcagcttcct
      601 gcacgtttac acgccgcgca gcatcgcttc cgtctggcta tcgaccgtgc gtttacggtg
      661 aaaggggcgg gactggtggt gaccggaacg gcgttgagcg gagaggtaaa cgtgggcgat
      721 acgctatggt tgaccggcgt taatacgccg atgcgcgtac gaagtctaca cgcgcaaaat
      781 cagcctaccg accatgcgta tgccgggcaa cgtattgcgc tcaatattgc gggcgatgcg
      841 gagaaggagc agcttaaccg cggcgactgg ctgctttccg atgcgccggc gggggaggct
      901 ttttcccggg tgatcgtttc tctggcgctt catgcgccgc tttcccaatg gcaaccgcta
      961 catattcacc atgccgccag ccatgtgacc ggtcgcgtct ctttgctgga aggcgcgctg
     1021 gccgagctga tctttgatac gccgttgtgg ctggccgata atgacagact ggtattgcgt
     1081 gatatttccg cacgcgccac ccttgccggc gcacgcgtgg tgacgcttaa cgcgccgcgc
     1141 cgcggtaaac gtaagccaga ttatttgcac tggctttcaa cgcttgccga tgcgcaggac
     1201 gatagcgcag cgttggccat tcatctggaa cgcggggccg tcaacctgcc ggatttcggt
     1261 tgggcgcgtc agcttaatcc tctcggtatg cgtcagctta ttgagcaaca tggttttatc
     1321 caggccggag acaatctgtt aagcgcgccc gtcgccgccc gctggcagcg taagattctt
     1381 gatacgctgg cgacctacca cgaacagcac cgcgatgaac cggggccggg acgcgagcgt
     1441 ttacgccgca tggccctgcc aatggaggat gaagcgctgg ttctgatgct gatcgagcgg
     1501 atgcgcgacg agggcctgat tcatagccat cacggttggt tgcatctgcc ggatcataaa
     1561 gcgggattta gcgatgagca gcaggccgtc tggcaaaaag tcgaaccgct atttggcgat
     1621 gagccctggt gggtacgcga tctggcgaaa gagaccggaa cggaagaaca attgatgcgg
     1681 ctggtgctgc ggcaggcggc acagcaaggc atcattaccg cgatcgtaaa agatcggtac
     1741 tatcgtaacg atcggattgt cgctttcgcc aatatgatcc gcgagctgga tcaagagaga
     1801 ggatcaacct gtgcggcgga ttttcgcgac aggctgaatg tagggcggaa actggccatt
     1861 cagattcttg aatattttga ccggattgga tttacacgac gtcgtgggaa tgatcattta
     1921 ttacgtgatg cgttattatt tccgcaaaaa gaatgaaatg gttaaattaa ataacaaatg
     1981 aagcaataca attattgcgt tgctttataa aaagcacatc agcaaatgaa cctgatgtgc
     2041 tttttatttt tctggcttct taaaatagcc atcgtgagcc tattatcaga atagttttgc
     2101 ccatattctt tgcgccttat tcaggcgact cacgacgaga ttgtggaact ttatcgcgcg
     2161 gcgatgtaac gcctttgccc ggtggcgcgg acgcttaccg ggcctgcgta gacgatgcag
     2221 gccggatagg gcgtaacacg ttatcttcgg tcgagctttt gctgcgccag ccagacggcg
     2281 cccagcctgc ctgcctgatt tcccagttgg cagggctgaa tcggcacctg gagcgcctcc
     2341 cacatttcaa acgtttcaag atgccgcgtc aggagcgggt agagcttttc ctgttcgctt
     2401 attcctccgc cgatcagcac cacgcccgga tcaaacatag agatcacgct gtaaacgccg
     2461 cgtgacagat aacgcgccca gtcattgacc gcctcacgca gatgaacatc ggtcgccatt
     2521 cgttcgaaga tcacatccgc aggcggcatc tcttctgcag gcagcgccag agcctggcgg
     2581 cacgacgcca ttaatccgct ggttgacgcg attttatgca tactttcgcc attattcccg
     2641 accggcatga cgccgaattc accggcgtgg aaatgtgcgc cgcgatacag ttctcgtccg
     2701 acgataatac cgccgccaat gccggttcca atggtgatac agaccagatt gtcataatgc
     2761 tgcccggcgc ctcgccacat ttcgcccagc gccgcgcagt tcgcgtcgtt ctccacgacc
     2821 agcggcagat cggttagccc gctgaacaac tccatcaggt tgacgtcatc caggtatgcc
     2881 agcgcgcccg cttttgccgc atgaccgtta tggggattaa tatggccggg gaaactgacc
     2941 ccgattgccg caatgtcata gtcctgctgg caacgcgcca ccacatcctg ccatttgcgg
     3001 gtaaacgtgg aggcgtcctc tggcgtatcg aattgatgat gggttaattc ttcgccgtca
     3061 ctgttaatca cgccatattt gacgtgagtt cctcccacat caataccgat atattgctgc
     3121 atagtgttct ccgtacgtta aacaggcacc tgtttagtat ggctaaaacc agacggagaa
     3181 acgtaaagga aagtaattcg tgattgctgt cgtaaagcga gaaaccattg gcgaaaaatt
     3241 caccagtacc gtctaccctt gtggagtacc tttacaataa ggagttggtc atgacgaaca
     3301 atcccccttc aacacgtatt cagccaagtg aatacgggta cccactgaag ttaaaagccc
     3361 gctatgacaa ttttattggc ggtgactggg ttgcgcccgc cgacggcgaa tattatcaaa
     3421 acctgacgcc agtgaccggc cagccgctat gtgaagtcgc ttcctccggt aaaaaagata
     3481 tcgatttagc gctcgacgcc gcgcataagg cgaaagataa gtgggcgcat acgtcagtac
     3541 aagaccgtgc cgctatcttg tttaagatcg ccgatcggat ggaacaaaac ctcgaactgt
     3601 tggcgacagc ggaaacttgg gataacggta aaccgattcg tgaaaccagt gccgccgaca
     3661 taccgctggc gatcgatcat ttccgctatt tcgcctcctg tatacgtgcg caggagggcg
     3721 ggatcagcga agttgatagc gaaaccgtgg cctaccattt tcacgaaccg cttggtgtcg
     3781 tggggcagat aatcccgtgg aactttccgc tgctgatggc aagctggaaa atggcgccag
     3841 cgctggcggc aggtaactgc gtggtgctta aaccggcacg cctgacgccg ctttccgttt
     3901 tactgttaat ggaagtcatt ggcgatctgt taccgccggg cgttgtcaac gtcgtgaacg
     3961 gcgcgggcgg cgagattggc gaatatctgg cgacctcaaa acgtatcgcg aaggtggcgt
     4021 ttaccggttc gacggaagtg ggtcaacaga tcatgcagta cgccacgcag aacattattc
     4081 cggtgacgct ggagttaggc ggcaagtcgc ccaatatctt cttcgccgac gtgatggatg
     4141 aggaagatgc gttctttgat aaagcgctgg agggatttgc cctgtttgcc tttaaccagg
     4201 gcgaggtgtg tacctgtcca agccgtgcgc tggttcagga gtccatctat gagcgcttta
     4261 tggagcgcgc tattcgccgg gtggagagca ttcgcagcgg gaacccgcta gatagcggta
     4321 cacagatggg agcgcaggtc tctcacggcc agcttgagac tatcctcaat tatatcgata
     4381 tcggtaaaaa agagggggcc gatattctga ccggtgggcg acgcaaggaa ctggatggcg
     4441 aacttaaaga gggctattac cttgagccta ccattctgtt tggtaagaat aatatgcgcg
     4501 tctttcagga ggagatcttt ggcccggtgc tggcggtaac cacctttaaa accatggaga
     4561 aggcgctgga aatcgctaac gatacgcaat atggcctggg tgctggcgtc tggagccgca
     4621 acggcaatct ggcctataag atggggcgcg gcattcaggc cgggcgcgta tggaccaact
     4681 gctatcacgc ctatccggca catgcggcgt ttggcggcta taagcagtcg ggcatcgggc
     4741 gcgaaaccca taagatgatg ctggaacact accagcaaac caagtgcctg ttggtgagtt
     4801 attccgataa gccgctgggg ctgttctgac gcaagaggta atgcccgatg gcgctgcgtt
     4861 tatcaggcct acaagaattt atcgcaatat actgatattg caaatcttgt aggccggata
     4921 aggcgcagcc gccatccggc acagtattac cgctcgttaa tccaaatccg catttcgccc
     4981 tcgccacggt tggcccagct aaaccacgga atgaatgtta gcgtctgcgg ctgacgcgat
     5041 gacggcgcgt tatcgtagtg ccacaacgcc tgatgctgcg catccgcggc gctttgcttc
     5101 tcgccttcgg cctgaatcag catcttatgc gcaaaaagcc ctttgccctc aaagacccgg
     5161 aactcactct ctttcggtag ccacagatta tgcagttctt cgccgttatc ggcctgctca
     5221 aggcaataga ccagcggccc gcgctgaata gcgaccttac cggcgacgtg acgcgccagc
     5281 ggattgccat acacgcggcg aaccggcatc ggcagcgtca ggcttatcgt atcgccctcc
     5341 tgccaggttc gacggatatg cagataacct ttgcgaatat cctgctccac ttccagcccg
     5401 ttgagcgtca cttttgcctc agggcaccag tccggcagac gtagcgccag cgtgtgacgt
     5461 accggctgca cagaatcgat ggcgatcttc acctgctcat gccacgggta gttcccgctg
     5521 attcgcagtt tgagcgcgcc attttcaacc ggtatttcca tgctgttacc cacgtacata
     5581 ttgatgtaca gcgcatccgc acgcggcgtg tagatgtagt gaccaatgga cgtgagtacg
     5641 cgggcgatat tcggtgggca gcaggcgcag ccaaaccagc gctggcggat gggtttaacg
     5701 tgatcgtaga tatggttgaa ttttaacgat tttggatgca cttccagcgg gttgacgtag
     5761 aagaaatgct tgccgtcgag cgccataccg ccgaggacgg tgttgtacag cgcgcgctcc
     5821 atcacgtcgg cgtactggct atcggcttcc atttccagca tccggcgggc gaacatcatc
     5881 aggccgattg aagcgcagct ttccgcatag accgaatcat tcggtaaatc gtaatcgctg
     5941 ctaaaggctt cgccgctgct ttgtgaaccg atgcctccgg tgatatacag ctgacgctgc
     6001 gccatatttt tccacaggcg caggcagtcc tggcgtttgc cttcatcgtt gctcaggcga
     6061 gcgagatgcg ccacgccagt catcagatag acaaaacgta ccgcgtggcc gattgccgtc
     6121 tgctgctgcg aaattggcag atgcgcctgg ctgtaggctt tgtctttgac catccacgcc
     6181 gggccgtagg tatgccagta agaggtttgg ccgcgttttt cgtactcttc gtcgtagaag
     6241 tgcggttggg cgccgcgctg cccgataaag taacttgcca gcgtcatata gcgcggctgc
     6301 tctgttacct catacagacg catcagcgcc agctcaattt ccgggtggcc cggataaccg
     6361 tgcagctgat tttcgccagg gccgaaagtg ctgtcgatat gatcggccag acgacaaacg
     6421 acgtctagca gccgacgctt gccggtggcc tgaaagaagg cgacgcccgc ttcaatcaga
     6481 tgcccggcgc aataaagctc atggcactcc gccaggttgc tccagcgttc ttgcggggct
     6541 tttgccgtaa agtacgtatt gagatagcca tcgtcacact gcgcggcggc caccagttca
     6601 atcacctcat cggcggtttt ctcaagctct gggtcgggtt tttggcacag tgaccaggca
     6661 accgcttcca gccatttcgc cacgtcgctg tcctgaaaga ccatgccgta aaagtcgccc
     6721 gtctgctggc ctgcggcaat gcggaaattt tcaatggcat ggctgggttc agcctctgga
     6781 atacgatcgt ttaacgcatc ccactggtaa ggaataacca catcgcgaac cagttgttga
     6841 tactgtccga gtaacggatc gctgaccgtc agtttatgca gatcgacttc cagtacgttc
     6901 atttcgtgct ccttaaggct gtagaggtca tagatattcc tcgctgacgg ggtattttat
     6961 ggcagtaatt tttattttcg cgttatgacc tgattcattt tgcccagata gcggtgagcg
     7021 acaaggcgat aaaagagtaa aaaaagatga cgattccgac tcgtatttaa aaatgtgaga
     7081 tggatcgagt gaaatgacta tttttagtta ataatcaaaa agtaatatga aatacggtgc
     7141 tgaatgagcg ggaaataaca tattaatgct cgaattatcc ataacattac cgattaaagt
     7201 ccaaaacggc ggattattta tttctcgcgg cattgggcgt catcctgcca ggcgtctgca
     7261 atcgtgggaa attatatttg tggaaaaagg ctgcctgaaa attcaggaag aatgtgtttt
     7321 ctgtgtcgaa gccggggaaa gcctgttgct ttggccgcat cgccgccata ttggcgttga
     7381 ggagtttccc gccgatctta aattttactg gctccatttt gaggtcaaag cgccggacag
     7441 cgacccgcgc tggctgacgc atctttccgt gccgcagcat acccaggttg ccgatccgca
     7501 ggcgctgatt gcgctttttc gccagtttat gaacgagcag gaaaagcacc agcgcagtcc
     7561 ggcgctggag ttcatcgtgc tgctgatttt gcagcagctc accgttgacg cccggcagaa
     7621 tgaaaacgcc gaggccgctg gcgtgtcgct ggcctggaaa gcgcagcagc tgattcgaac
     7681 gcactatcac ctgccgcttt ccagcgcggt tctggcgaaa gaactgcatt gcaatgtgga
     7741 ttatctggga cgcgtttatc ggcgggtatt tcaccttacg ctaacggaag ccatccaccg
     7801 ccagcgggtg cgcgaggcgg aaaagttgct gattagcgac gcgcgttcgt taaaagaggt
     7861 ggcggagcgg tgcggtttta atgacgttgg ttactttcgc cagatcttcc gcaagcacac
     7921 cggcctgacg cctaccgcct ggaagcggcg ctacagtaag gaacacgtta attcttgagt
     7981 ataatctttg gccctctgac aacgcggttg caaactgaat gcccgatggc gctttgctta
     8041 tcgggcctac aagagttcat cacaacgtat tgatattgca aatcttgtag gtcggataag
     8101 gcgcagccgc catccgacac aggctgtgac tgccgatatt actgcccgta ataggcgttc
     8161 gcgccatgtt tacgcagata gtgtttatcg agcaattccg gctgcatatc cggtagctgc
     8221 ggggccagct ggcgcgagaa cagccccata taggcgcact cctcaagcac cacggcgttg
     8281 tggacggcat cggcggcatt tttaccccag gcaaacgggc cgtgtgaatg aactaatacc
     8341 gccgggattt gcgccggatc gagaccgcgc tcttcaaagg ttttaataat cacctcgccg
     8401 gtctgatact cgtactcgcc gttaatttcc tcaacggtca tcagccgggt acaggggatc
     8461 gcgccataga aatagtcggc gtgggtggtg ccccaggcgg gcagatcgag cccggcctgc
     8521 gaccagatcg tcgcatggcg ggaatgggta tgcacgatcc caccgatctg cggatagcgg
     8581 cgatagagcg ccagatgggt cgcggtatcg gacgacggtt ttttgttgcc ttcaacgacc
     8641 ttaccgctgg cgatctctac caccaccata tcgtcggcgg tcatcacctc atattcgacg
     8701 ccggaaggct taatgaccat cagcttgcgc gtctcatcga ccgcgctgac gttgccccag
     8761 gtaaaggtga ccagcccgtg cgccgggagg gccaggttgg ccgccagcac ctcggctttc
     8821 agttgctcta acatgtgaaa cctccttcct gcatccgtga ttcaatccag cggcgggcct
     8881 ggataatttc cagcaccggc tcgctggctt tctctgtcca catctcaatc agaaatgaac
     8941 cgcgatagtt cagctcatgc agcgttttga agatgctgac aaaatcaacg catccttcgc
     9001 caaacggcac gtcgcggaac tggccggggt tgtcaccggt caccggcagc gtgtctttca
     9061 ggtggatcgc ggcgatacgg tcgataccca gcttcagctc ggcggtcacg tcgttccccc
     9121 aggcgctgag gttgccgacg tctggataaa cggtgaacca cggtgacgaa agcatctcgt
     9181 cccacttttt ccacttgctg atggagttca taaacgcggt atccatgatc tccaccgcca
     9241 gcatcacctg cgccgctgcg gcctgttcca ccgcccacgc cagcccttcg gcgaaacgtt
     9301 gctgggtgcc ttcgtcgtgc tct
//
LOCUS       DAGWFR010000159         9231 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.161, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000159 DAGWFR010000000
VERSION     DAGWFR010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 9231)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9231)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9231
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.161"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..368
                     /locus_tag="MOX77_003713"
     CDS             <1..368
                     /locus_tag="MOX77_003713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HCA3359134.1"
                     /translation="DKARLVVSVGRGIGSKENISLAEALCQTIGAELACSRPVAENEK
                     WMEHERYVGISNLMLKPELYLAVGISGQIQHMVGANGAQTIFAINKDKNAPIFQYADF
                     GIVGDALKILPALTAALAR"
     gene            418..1704
                     /locus_tag="MOX77_003714"
     CDS             418..1704
                     /locus_tag="MOX77_003714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HCA3359135.1"
                     /translation="MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKN
                     VTGGRLYAHSLERIIPGFADQAPIERMITHEKLAFMTDNGAMTIDYCNGEDASASQVS
                     YSVLRSKFDAWLMEQAEEAGAQLITGIRVDNVVQRDGKVVGVEADGDILEAKVVILAD
                     GVNSLLAEKLGMAKRVEASHVAVGVKELIELPKSVIEDRFQLQGNEGAACLFAGAPTD
                     GLMGGGFLYTNETTLSLGLVCGLHHLKDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEY
                     AAHVVPEAGMNMQPELVGDGVLIAGDAAGMCMNLGFTIRGMDLAISAGEAAAKTVLSA
                     MKRDDFSKQSLGEYRQHLDEGPMRDMRMYQKLPAFLDNPRMFTAYPEMAVSIARDLFT
                     VDGSAPVPMRKKILRHAKKVGFINLMKDGLKGVTVL"
     gene            1701..1988
                     /gene="fixX"
                     /locus_tag="MOX77_003715"
     CDS             1701..1988
                     /gene="fixX"
                     /locus_tag="MOX77_003715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-like protein FixX"
                     /protein_id="HCA3359136.1"
                     /translation="MTSPVNVDVKLGVNKFNVDEDSPHIILKTDPDKQALEVLVKACP
                     AGLYKKQDDGSVRFDYAGCLECGTCRILGLDTALEKWEYPRGTFGVEFRYG"
     gene            2136..3476
                     /locus_tag="MOX77_003716"
     CDS             2136..3476
                     /locus_tag="MOX77_003716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3359137.1"
                     /translation="MPQPRNFDDLKFSSIHRRIMLWGSGGPFLDGYVLVIIGVALEQL
                     TPLLHLDAEWIGALGAATLAGLFIGTSLFGYICDKVGRRKMFLLDIIAIGVISVATMF
                     VSTPLELLVMRVLIGIVIGADYPIATSMITEFSNTRQRAFSIGFIAAMWYVGATCANL
                     VGYWLYDMEGGWRWMLGSAFIPCLIILIGRFDLPESPRWLLRKGRVKECEQMMIKLFG
                     EPVCFDDEPPQETRFLQLFNRRHFPFVLFVAAIWSCQVIPMFAIYTFGPQIVGLLGWE
                     QGRNAALGNVVISLFFMLGCIPAMFWLNSIGRRPLLIGSFAMMTIALALLGLVSNLGI
                     ILVVVAFAVYAFFSGGPGILQWLYPNELFPTDIRASAVGVIMSLSRIGTIVSTWALPI
                     FITRYGINNVMLIGALISLVGLGVSVMFAPETRGLTLTQTGNMTLRGTPSDNPR"
     gene            3565..3795
                     /locus_tag="MOX77_003717"
     CDS             3565..3795
                     /locus_tag="MOX77_003717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgdI/YgdR family lipoprotein"
                     /protein_id="HCA3359138.1"
                     /translation="MQKRLMTALFTAATLFTVAGCSSNQAVETTDGKTIVTDGKPEVD
                     NDTGMVSYKNAATGKTEQINRDQLKNMSELDN"
     gene            4086..4502
                     /locus_tag="MOX77_003718"
     CDS             4086..4502
                     /locus_tag="MOX77_003718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3359139.1"
                     /translation="MKLIPFYLLALFSAASGATEINACKDLIGTWKTTADNPPYTMTI
                     LPPVEGCGEKCVKLNVQYELDVTHRNALYCHEGQEGVKGQGPMVIAFEGAYGGHAIGT
                     YNRQLQLLWAGVIPKNKKGKWITKMENYWFRQVKAH"
     gene            complement(4726..5016)
                     /locus_tag="MOX77_003719"
     CDS             complement(4726..5016)
                     /locus_tag="MOX77_003719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1471 domain-containing protein"
                     /protein_id="HCA3359140.1"
                     /translation="MKKRIIAAALLATVASFSTLAAEQVSKQEISHFKLVKVGTINVS
                     QSGGQISSPSDLREKLSELADAKGGKYYHIIAAREHGPNFEAVAEVYNDATK"
     gene            5914..7802
                     /locus_tag="MOX77_003720"
                     /pseudo
     CDS             5914..7802
                     /locus_tag="MOX77_003720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459089.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
     gene            8209..8739
                     /gene="kefF"
                     /locus_tag="MOX77_003721"
     CDS             8209..8739
                     /gene="kefF"
                     /locus_tag="MOX77_003721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-regulated potassium-efflux system
                     oxidoreductase KefF"
                     /protein_id="HCA3359141.1"
                     /translation="MILIIYAHPYPHHSHANKQMLEQAGTLENVEIRSLYHLYPDFNI
                     DVAAEQEALSRASLIVWQHPMQWYSVPPLLKLWMDKVLTHGWAYGHGGTALHGKHLLW
                     AVTTGGGENHFAIGSHPGFAVLSQPLQATALYCGLKWLPPFAMHCTFICDDDTLQAQA
                     RQYKQRLLAWQEVNHG"
     gene            8732..>9231
                     /locus_tag="MOX77_003722"
     CDS             8732..>9231
                     /locus_tag="MOX77_003722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HCA3359142.1"
                     /translation="MDSHTLLQALIYLGSAALIVPIAVRLGLGSVLGYLIAGCIIGPW
                     GLRLVTDAESILHFAEIGVVLMLFVIGLELDPQRLWKLRASVFGGGALQMVVCGGLIG
                     LFCMFLGLRWQVAELIGMTLALSSTAIAMQAMNERNLTVSQVGRSAFAVLLFQDIAAI
                     PLVAMIP"
BASE COUNT         2236 a         2202 c         2412 g         2381 t
ORIGIN      
        1 tcgacaaagc gcgtctggtg gtcagcgtgg gacgcggcat cggcagcaaa gagaatatct
       61 cgctggccga agcgctgtgc cagaccatcg gcgccgagct ggcctgttcc cgcccggtgg
      121 cggaaaacga gaagtggatg gagcacgagc gctacgtcgg tatctccaac ctgatgctca
      181 aacctgaact gtatctggcg gtggggatct ccgggcagat ccaacacatg gtcggcgcca
      241 acggcgcgca gacgattttc gccatcaaca aagataaaaa cgcgccaatc ttccagtatg
      301 cggattttgg catcgttggc gatgcgctga agatcctgcc tgcgctgacg gctgccttag
      361 cgcgataaac catttcgggc aggatacgaa ggtatcctgc cgctgacagg agtacgtatg
      421 tccgaagata tctttgatgc catcatcgtg ggtgcaggtc tggccggttc ggttgcggcg
      481 ctggtgcttg ctcgcgaagg tgcacaggtg ctggttatcg agcgcggcaa ttctgctggc
      541 gcgaagaatg tcaccggtgg gcgtttgtat gcacatagcc tggaacgcat cattcccggc
      601 tttgcggatc aggcccccat tgaacgcatg atcacccacg aaaaactcgc ctttatgacc
      661 gacaacgggg cgatgactat cgactactgc aatggtgaag atgcttcagc gtcgcaggtt
      721 tcttattccg ttttgcgtag taaatttgac gcctggctga tggagcaggc cgaagaggcg
      781 ggggcgcaac tgatcactgg tattcgcgtg gataacgttg ttcagcgtga tggcaaagtc
      841 gtgggcgtgg aagccgatgg cgatattctg gaagccaaag tcgtaatcct cgctgacggg
      901 gtgaattctc tgctggctga aaagctgggc atggccaagc gtgttgaggc atcgcatgtt
      961 gccgtcggtg tgaaggaact gatcgaattg ccgaagtcgg tcattgaaga tcgtttccag
     1021 ctacagggca acgaaggtgc cgcctgtctg tttgccgggg cgccaaccga tggtctgatg
     1081 ggcggtggct tcctgtatac gaatgaaaca accctttccc tagggctggt ctgcggtctt
     1141 catcatctga aagacgcgaa aaaatcggtc ccgcaaatgc tggaagattt caaacagcat
     1201 ccggccgttg cgccgctgat cgccggtggc aagctggtgg aatatgccgc acacgttgta
     1261 cccgaggcgg gaatgaatat gcagcctgaa ctggtgggcg atggtgtact gattgccgga
     1321 gacgctgccg gcatgtgtat gaacctcggc tttaccatcc ggggtatgga tctcgccata
     1381 tccgcaggcg aagcggcggc gaagacggtg ctttcggcga tgaagcgcga cgattttagc
     1441 aagcagtcgt tgggtgaata ccgtcagcat ctggacgaag gtccgatgcg cgatatgcgc
     1501 atgtatcaga aactgccagc ttttcttgat aatccccgca tgtttaccgc ctatcccgaa
     1561 atggcggtca gtatcgcgcg cgacctgttc accgtggatg gctccgcgcc ggtgcccatg
     1621 cgtaaaaaaa tcctgcgcca tgcgaagaaa gtgggcttca tcaacctgat gaaagatggc
     1681 ctgaaaggag tgaccgtatt atgacatctc ccgtcaatgt ggacgtcaaa ttgggcgtca
     1741 ataagttcaa tgtggatgaa gatagcccgc acatcattct caaaaccgat cctgataaac
     1801 aggcgctgga ggtgctggtt aaggcctgtc cggcgggact gtataaaaag caggacgacg
     1861 gtagcgttcg ttttgattac gccgggtgcc tggagtgcgg aacatgccgg atcctcggcc
     1921 ttgatacggc gctggaaaaa tgggaatacc cacgcgggac gtttggcgtg gagttccgct
     1981 acggctaata agtacgagtt tgtgcccccg taggccggat tagatgcggt agcgtcgcca
     2041 tccggcaatc atgtggcgcc aatgccggat ggcggcgtaa acgccttatc cggcctacag
     2101 atgacgcttt gcccgtgttg aaacaggaca tcaccatgcc gcagcccagg aactttgacg
     2161 accttaaatt ctcctccatc catcgcagaa ttatgctgtg gggaagcggc ggcccgttcc
     2221 ttgatggcta cgtgctggtg atcattggcg tggcgctgga acaactgacg ccgctattgc
     2281 accttgatgc tgaatggatt ggcgcgctcg gcgcggctac gcttgccgga ctgtttatcg
     2341 gcacctcgtt gtttggctat atttgcgata aagtcgggcg gcgtaaaatg ttcctgcttg
     2401 atattatcgc tatcggcgtt atctccgtgg cgaccatgtt tgtttccacg ccgcttgaat
     2461 tgctggtgat gcgcgtttta attggcattg ttatcggcgc ggattaccct atcgccactt
     2521 ccatgattac ggagttttcc aacacccgcc agcgtgcgtt ctccatcggt tttatcgccg
     2581 cgatgtggta cgtcggcgcg acctgcgcca acctggtggg ttactggctg tatgacatgg
     2641 aaggaggctg gcgctggatg cttggcagcg cctttatccc gtgcttaatc attttgattg
     2701 gccgctttga cctgccggaa tcgccacgct ggctattgcg aaaaggacgg gtaaaagagt
     2761 gcgaacaaat gatgatcaaa ctgttcggcg aaccggtctg ctttgacgat gagccgccgc
     2821 aggagacccg cttcctgcag ctgtttaacc gccgtcattt cccgtttgta ctgttcgttg
     2881 cggctatctg gagctgtcag gtgatcccga tgttcgctat ctataccttt gggccgcaga
     2941 tcgtcgggtt actcggctgg gaacaggggc gcaacgcggc gctcggcaat gtggtgatta
     3001 gcctcttttt tatgctgggc tgtataccgg cgatgttctg gctaaacagt attggccgtc
     3061 gccctctgct tattggcagc ttcgccatga tgactatcgc gctggcgctg ctggggctgg
     3121 tgtcaaatct gggtatcata ctggtcgtgg tggcgtttgc ggtatacgcc ttcttttccg
     3181 gcggaccggg catactgcaa tggctttatc ctaatgaact cttccctacg gatattcgcg
     3241 cttcggccgt gggggtcatc atgtcattaa gccgtatcgg aaccattgtc tccacctggg
     3301 cattaccgat ttttattact cgttacggta ttaataacgt catgctgatt ggcgcgttga
     3361 tttcgttagt cgggcttggc gtatcggtga tgtttgcccc ggaaactcgc ggcttgacgc
     3421 taacacagac cggaaacatg actttgcgcg gaacgccatc ggataaccct cgttaagagt
     3481 gttctgcatt tctccctgct tttcgccaat aacgctacag ttaacagtca catgctaaaa
     3541 caactgaaaa gcagggagaa caccatgcaa aaacgtctta tgaccgcact gtttaccgca
     3601 gcaacactat tcaccgtcgc aggatgctct tctaaccagg cggttgaaac cacggatggc
     3661 aaaactattg tcaccgacgg gaaacccgag gtcgataacg ataccggtat ggtgtcttac
     3721 aaaaacgccg ccaccgggaa aaccgaacag attaaccgcg atcagctgaa aaatatgagc
     3781 gagctggata attaattcaa ttttttctgg ttagccgcgc aataatattc tctctttatg
     3841 cgcatccatt tattcccatg cgaataaacg gatgcctgaa ctggcaggga cgccggaaaa
     3901 cgtcgaaata cgttcgcccg tgttcccgct ttccccaccg cgctgtccgc ttacatgagg
     3961 ttacactcat cgacatttct ctgaacagcg gctcaacatt tcccggaaaa aacatatcgc
     4021 aaggcattta tccttatgat taggtataaa tgattaggta taaggaaacg gagtctgtaa
     4081 tgaaactgaa actaatacct ttttatttgc tcgcgctatt ttctgccgcc tccggggcta
     4141 cggagataaa cgcctgcaaa gacctgatcg gaacatggaa aaccactgca gataacccgc
     4201 cttataccat gacaatattg ccgccagtag aaggctgcgg ggaaaaatgt gtgaaactga
     4261 acgtacagta tgaacttgac gtgactcacc gcaacgcgct ttattgccat gaaggacaag
     4321 agggggtaaa agggcaggga cccatggtga tagcatttga aggggcgtat ggtggacacg
     4381 ctattggaac ctataaccga cagctgcaat tactttgggc tggcgtaata ccgaaaaata
     4441 aaaaggggaa atggataacg aaaatggaaa attactggtt caggcaggta aaagcgcact
     4501 aaatattacc ttaaaacagc ccgcaaaacc gtcttattca cgaagggctt actgcctgcg
     4561 cgcgcacatt ccaacggctt gcctgccccg gatgaactgt tgataaaaaa gagggccagc
     4621 atctgtttcc agacggccct gagtggattg tgacgtaaca tggcaccttg ctggcgctct
     4681 cttattattt catgccagtg ccatcgttat ggcgcaatca gagctttatt tcgtcgcatc
     4741 gttataaact tcggcaacgg cttcaaaatt cggaccatgc tcacgtgcag cgataatatg
     4801 gtaatatttt ccgcctttcg catcggctaa ttctgacagt ttttcgcgta gatcagaggg
     4861 tgaggaaatc tgcccgccac tctgggacac atttatggtg ccgaccttaa ccagtttgaa
     4921 gtggctgatt tcttgcttag agacctgctc tgccgcaagt gtgctgaatg aagcaaccgt
     4981 tgccagtaat gcggcggcaa tgatgcgttt tttcatagtt ctgttcctgt tgcattgatg
     5041 ataaggtttg cgcaatatca gtaatccgta acgaaattat ttataccctt catacttcag
     5101 gttgcttatg tgttggctac ggattactcg gcccacccat gggcctcgcc ctgacgggcc
     5161 gtcgcacgcg acgttcaaat ctgctcccgg cagatttgtc gctcacctca gtcacataat
     5221 tatctatgct cctggtgact cactcccttg ccgcctttaa gcaactcgaa ttattttggg
     5281 taataacctc ggttgattat ctgaaaatag ccttatttgg tgtgaccgtc ttatatcttg
     5341 ttatagtcac ctctttatgt tgttgtcaat gtaaaataat gcgctgccag ctaaaaagaa
     5401 acttaacccc ctgtaaataa tagtttttat attatttctt ttaatggcgt aatttttatt
     5461 gaatcacgcg acaatacgct agttttattc ataagcaaca taacagaatt gagttatgtt
     5521 ttaatttccc agagtgatat taccggttgt atgtctatgg ttgcgcggcc tgttactgat
     5581 agtgtttctt tcggggcgat tttattgtaa cggcataggg taatcaccgt agctgaaggg
     5641 aaaaggcacg aacacagcgc tatagagtat gtttaataat gtattttttt atgaagtaat
     5701 gtctgcagtt gtatctctaa aataaaaaca atgaactttt catctaaata atttttcagt
     5761 gaattatggt tatttattaa tatatttcta atttgaaata caaatcaatt tataacacat
     5821 attcttaccc ggaaggcatt gatacatatc cacgcttcct cgtacagtaa taaatgaata
     5881 tgtgataaag ttactgacta caggtataat aatatgagta ataaaaaaaa tctgtccgca
     5941 gaagagacgg atcttacgcg taggaaactg ttaaccagcg ccggtattct tgccgccggc
     6001 ggtatgctat ccggcgcggt aaaggctgat gaaaaatgcg ccgtcaaggc gaaaccgacg
     6061 tgggataaac cgtttactgg cgaaatcccg gaaaaattgc cagaaggata taatattctg
     6121 ttagtcgtga ccgactagga gcgttttttt cctacgtttc ctttccctgt acccggcaga
     6181 gagcggctca tgaaaacggg ggtgacattc tgtaatcatc agaataccag taatgtctgt
     6241 acgccttccc gctccgtatt gtataccggc ttacatatgc cccagacaaa gatgtttgat
     6301 aatctgggat taccctggat gccttatgac cttgaccccg ctcttggaac cacaggccat
     6361 atgatgcggg aactgggata ctatacggcc tataaaggta agtggcatct tacagaaaaa
     6421 ctggagaagc ctttgcctga cgaaaaagat gaggatattg atgtcgggga tattcctgaa
     6481 ccagaattac ataaaattat ggaaaaatat ggttttgctg actatcacgg catcggcgat
     6541 attataggcc atagtaaagg cggctatttt tatgattcaa ccaccacggc tcagactata
     6601 aattggttaa gatgcaaggg gcagcccttg aatgaccaac acaagccctg gttcctggcc
     6661 gttaacctcg ttaatcctca tgacgtcatg tttattgata ccgataaaga aggagaaaag
     6721 gtacagtggc gtggcgagtt ggatcaggat gataataccc tggcgcccac gcagccgccg
     6781 gaaaacgagc tttatcaggc aagctggccg aactatccgc tgccggcaaa caggcatcaa
     6841 tcattcaatg agcagggaag accgccggcg catcttgaat accagacggc gcgcgctgcg
     6901 ctggaagggc agtttcctga tgaagatcgt cgttggcgta aactgcttga ctactatttc
     6961 aactgtatcc gcgattgtga tactcacctt gaccggatat taaatgaact ggatgccctc
     7021 aagttaactg ataaaacgat tgttgtattt actgccgatc atggcgaatt aggcggaagc
     7081 catcagatgc acggtaaagg cgcttccgtt tataaagaac agatccatgt accgatgatt
     7141 atttcccacc cggcgtaccc cggtaataag aaatgtcagg cgttgacctg tcatcttgat
     7201 attgcgccga cattagttgg gctgaccggt ttgccggaag aaaaacagca ccaggcgtta
     7261 ggcaaccgca aaggcgttaa ttttagcgga ttgctaaaaa acccggagag cgttgcggtt
     7321 aatgcggtga gaaatgccag cttatattgc tatggcatga tcttgtatac cgatgcccat
     7381 tatctccacc gtgttatcgc gctacaaaga gataaacaaa aacggtggcg caaatcaagc
     7441 aggaaatatc gcatttgcat cctgatttca gccatcgttc agggacgcgg atgattaacg
     7501 atggccgtta taagtttgca cgctatttct cgctaaggga gcataatacg ccggaaacct
     7561 gggaggatct tattaagtac aacgatcttg aactttacga tcttaaaaat gatcctgatg
     7621 agaaccataa ccttgctgct gataaacaga aatatcagga tctcattctt acgatgaatg
     7681 aaaaactgaa taaaattatc aaagacgaaa ttggcgtgga tgacggcagt tttatgccgg
     7741 atgcggcccg tgagccatgg gatcttacta ttgagcaatt taaccgcatg gcgaaagatt
     7801 aagagcctga cccattaggt taatttatgc gtcggtgatc tagcatccag cgtgtctgga
     7861 ggttcagatg ctgttggcgc tgcgcttatt gggcctgtgt catcatgtaa tggattgata
     7921 ttacagtcat tacaggaaaa tttagcgcag cgccacccga caagaaggcc ttaaaccgat
     7981 ttgtcagcaa tttaaggctg ccatcatcac caacctttcc acaccggatc gcgcttttcc
     8041 acaaacgcct gcggcccttc gagggcatct tccgggggca ggatggcgtc aactccttgc
     8101 tggcgttaat tcaatttttt ctgattagcc gctcaataat attcactatt agcctggcga
     8161 atttgtcact acactttgtg ataaaaaaca gatcatcaca ggctaatcat gatcctcatt
     8221 atttatgcgc atccgtatcc gcatcattct catgcgaata agcagatgct tgaacaggca
     8281 gggacgctgg aaaacgtcga aatacgttcg ctttatcacc tctatcccga tttcaatatt
     8341 gacgtagccg ccgagcaaga ggcgctgtcg cgcgcgagtc ttatcgtctg gcagcatccg
     8401 atgcagtggt acagcgtccc tcctttactc aaattatgga tggataaagt cctcacccac
     8461 ggctgggctt acggtcatgg cggtacggca ttgcatggta aacatctgct gtgggcggta
     8521 acgaccggcg gtggtgaaaa ccactttgct atcggctccc atccaggatt tgccgtcctt
     8581 tctcagccgc tacaggcgac ggcgctctat tgcggcctca aatggctgcc gccgtttgcc
     8641 atgcactgca cgttcatttg cgatgacgac accttacagg cgcaggcgcg tcagtataaa
     8701 cagcgtttac tggcatggca ggaggtgaat catggatagc catactctac tgcaggcgct
     8761 gatctatctt ggttcagcgg cgttgattgt gccgattgcg gtacgtttgg gcttaggatc
     8821 agtgctgggg tatctgattg cgggttgcat tatcggcccc tgggggctac ggctggtgac
     8881 ggacgccgaa tctattctgc attttgcgga aatcggcgtc gtgctgatgt tgtttgttat
     8941 tgggcttgaa ctggacccgc aacggttatg gaagctgcgc gcctcggtat ttggcggcgg
     9001 cgcgttacag atggtggtct gcggcggact gattggtctg ttctgtatgt ttcttggcct
     9061 gcgttggcag gtggcggaac tgattggcat gacgctggcg ctttcgtcca cggctatcgc
     9121 catgcaggca atgaatgagc gtaacctgac cgtttcacag gtagggcgta gcgcatttgc
     9181 agtgctcttg ttccaggata tcgcggcgat cccgctggtg gcgatgattc c
//
LOCUS       DAGWFR010000160         9093 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.162, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000160 DAGWFR010000000
VERSION     DAGWFR010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 9093)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9093)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9093
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.162"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            93..1364
                     /locus_tag="MOX77_003723"
     CDS             93..1364
                     /locus_tag="MOX77_003723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-threonate kinase"
                     /protein_id="HCA3359143.1"
                     /translation="MKMMVIADDFTGSNDTGVQLAKKGARTEVMLSASQKPSRRADVL
                     VINTESRAMPADQAASAVYAALSPWCETSPAPLVYKKIDSTFRGNIGAEVTAAMRASQ
                     RKLAVIAAAIPAAGRTTLEGKCLVNGAPLLETEFASDPKTPIVSSRIAEIVALQSEIP
                     VYEVFLQDVRRGGLSALLTAYAAEGEGIIVVDAVEERDLTLIAQAACEQPSMPLLVGA
                     AGLANALPVELFMQDRQRLPVLVVAGSMSEATRRQVDNALCRGRAEVVDIDAARMVSD
                     SAEQEIASVVEQACALLSQHRHTILRTSRRAEDRQLIDALCEKSAMSRQQLGERLSHR
                     LGVVTLNIIEQARIGGLFLTGGDIATAVAGALGAEGYRIQSEVAPCIPCGTFVNSEID
                     DLPVITKAGGFGSDSTLCDALYYIEEMYCGD"
     gene            1354..2337
                     /locus_tag="MOX77_003724"
     CDS             1354..2337
                     /locus_tag="MOX77_003724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-threonate 4-phosphate dehydrogenase"
                     /protein_id="HCA3359144.1"
                     /translation="METKTVAITMGDPAGIGPEIIVKALSEDGLNGAPLVVIGCLATL
                     KCLQAKGITPNVELRAIERVAEARFAPGIIHVIDEPLAQPEALEAGKVQAQAGDLAYR
                     CVKRATELALRGDVQAIATAPLNKEALHLAGHNYPGHTELLATLTHSRDYAMVLYTDK
                     LKVIHVSTHIALRKFLDTLSTTRVETVIGIADTFLKRVGYVKPRIAVAGVNPHAGENG
                     LFGDEETRILTPAITDARAKGMDVYGPCPPDTVFLQAYEGQYDMVVAMYHDQGHIPLK
                     LLGFYDGVNITAGLPFIRTSADHGTAFDIAWTGKAKSESMAVSIKLAMQLA"
     gene            2347..3114
                     /locus_tag="MOX77_003725"
     CDS             2347..3114
                     /locus_tag="MOX77_003725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HCA3359145.1"
                     /translation="MKGQHRLDLIVAYLKNHTLVTVEQLVEAVDASPATIRRDLIKLD
                     EQGVISRSHGGVALRRFEPAQPTTNEKQLRSPAEKRAIARVAASLVNAGDAVVLDAGT
                     TMMELAKCLTHLPLRVITVDLHIALFLAEFRQIEVTIVGGRIDDSSQSCIGEHGRKLL
                     RSVYPNIAFMSCNSWGVKTGVTTPTEDKAGLKQEIIANAQRKVLLADSSKYGAHSLFN
                     VVPLERFNDVITDVNLPPSAQVELKGRAFALTLVQPE"
     gene            complement(3144..3938)
                     /gene="speD"
                     /locus_tag="MOX77_003726"
     CDS             complement(3144..3938)
                     /gene="speD"
                     /locus_tag="MOX77_003726"
                     /EC_number="4.1.1.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine decarboxylase"
                     /protein_id="HCA3359146.1"
                     /translation="MKKLKLHGFNNLTKSLSFCIYDICYAKTAEERDGYIAYIDELYN
                     ANRLTEILSETCSIIGANILNIARQDYEPQGASVTILVSEEPIDPKLIDQTEHPGPLP
                     ETVVAHLDKSHICVHTYPESHPEGGLCTFRADIEVSTCGVISPLKALNYLIHQLESDI
                     VTIDYRVRGFTRDVNGMKHFIDHEINSIQNFMSEDMKSLYDMVDVNVYQENIFHTKML
                     LKEFDLKHYMFHTKPEDLTETERQQITAALWKEMREIYYGRNISAV"
     gene            complement(3959..4819)
                     /gene="speE"
                     /locus_tag="MOX77_003727"
     CDS             complement(3959..4819)
                     /gene="speE"
                     /locus_tag="MOX77_003727"
                     /EC_number="2.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine aminopropyltransferase"
                     /protein_id="HCA3359147.1"
                     /translation="MAENTMWHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFG
                     RVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVE
                     TITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFTLVIDDGVNFVNQTHQTFDVIISDCT
                     DPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQDEALDSHRKLSHYFSDVGF
                     YQAAIPTYYGGIMTFAWATDNDALRHLSSEIIQARFHAAGLKCRYYNSAIHAAAFALP
                     QYLHDALSAQ"
     gene            complement(4926..5273)
                     /locus_tag="MOX77_003728"
     CDS             complement(4926..5273)
                     /locus_tag="MOX77_003728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YacC family pilotin-like protein"
                     /protein_id="HCA3359148.1"
                     /translation="MKTFFRPVLFGSLMALCANSYALTESEAEDMADLTAVFVFLKND
                     CGYQNLPNSQIRRALVFFAQQNQWDLSNYDTFDMKSLGEDSYRDLSGIGIPVAKKCKA
                     LARDSLSLLAYVK"
     gene            5475..7085
                     /gene="cueO"
                     /locus_tag="MOX77_003729"
     CDS             5475..7085
                     /gene="cueO"
                     /locus_tag="MOX77_003729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase CueO"
                     /protein_id="HCA3359149.1"
                     /translation="MLRRDFLKYSVALGVASALPLWSRAAFAAERPALPIPDLLTADA
                     SNRMQLIVKAGQSTFAGKNATTWGYNGNLLGPAVQLHKGKSVTVDIHNQLAEDTTLHW
                     HGLEIPGIVDGGPQGIIPAGGTRTVTFTPQQRAATCWIHPHKHGKTGRQVAMGLAGLV
                     LIEDDEIRKLRLPKQWGIDDVPVIIQDKRFSADGQIDYQLDIMTAAVGWFGDTLLTNG
                     AIYPQHSAPKGWLRLRLLNGCNARSLNIAASDNRPLYVIASDGGLLAEPVKVTELPLL
                     MGERFEVLVDISDGKAFDLVTLPVSQMGMAIAPFDKPHPVMRIQPLRITASGTLPDTL
                     TTMPALPSLEGLTVRNLKLSMDPRLDMMGMQMLMKKYGAQAMSGMDHDSMNAHMQGGN
                     MGHGEMDHGNMDHSGMNHGAMGNMNHGGKFDFHNANFINGQVFDMNKPMFAAQKGRHE
                     RWVISGVGDMMLHPFHIHGTQFRILSENGKAPAAHRTGWKDTVRVEGGISEVLVKFDH
                     DAPKEHAYMAHCHLLEHEDTGMMLGFTV"
     gene            complement(7163..>9093)
                     /locus_tag="MOX77_003730"
     CDS             complement(7163..>9093)
                     /locus_tag="MOX77_003730"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="membrane-bound PQQ-dependent dehydrogenase,
                     glucose/quinate/shikimate family"
                     /protein_id="HCA3359150.1"
                     /translation="TPAATSSSIADEDWPAYGRNQEGQRYSPLKQITADNVHQLKEAW
                     VFRTGDLKQPNDPGEITNEVTPIKVGDTLYLCTAHQRLFALDAASGKEKWHFDPQLKT
                     DSSFQHVTCRGVSYHEAKADTASPEVIADCPSRIILPVNDGRLFAVNAETGKLCETFA
                     NKGVLNLQTNMPDTTPGLYEPTSPPIITDKTIVIAGSVTDNFSTRETSGVIRGFDVNS
                     GKLLWAFDPGAKDPNTIPADEHAFTFNSPNSWAPAAYDAKLDLVYLPMGVTTPDIWGG
                     NRTPEQERYASSILALNATTGKLAWSYQTVHHDLWDMDLPAQPTLADITVDGTTVPVI
                     YAPAKTGNIFVLDRRNGELVVPAPEKPVPQGAAKGDYVAKTQPFSDLTFRPKKDLSGA
                     DMWGATMFDQLVCRVMFHQLRYEGIFTPPSEQGTLVFPGNLGMFEWGGISVDPDRQVA
                     IANPMALPFVSKLIPRGPGNPMEPPKDAKGTGTEAGIQPQYGVPFGVTLNPFLSPFGL
                     PCKQPAWGYISALDLKTNEIVWKKRIGTPRDSMPFPMPVPVPFNMGMPMLGGPISTAG
                     NVLFIAATADNYLRAYNMSNGEKLWQGRLPAGGQATPMTYEVNGKQYVVISAGGHGSF
                     GTKMGDYIVAYALPDDAK"
BASE COUNT         2039 a         2324 c         2659 g         2071 t
ORIGIN      
        1 gcctcggtga tcaccacggc aatcctgacg ccagtgttga cctcctgggt tgcgaaaaaa
       61 caggcgcgtc aggcttcttt ggagaaaaac gcatgaaaat gatggttatc gccgatgatt
      121 ttaccggatc gaatgatacc ggcgtccagt tggcgaagaa gggggcgaga acggaagtca
      181 tgttgagcgc gtcgcaaaaa ccgtcccgcc gcgccgatgt gttagtcatt aacaccgaaa
      241 gccgggcgat gcccgcagat caggcggcat ctgccgttta tgccgcgctt tccccgtggt
      301 gtgagacatc gccagcgccg ctggtgtaca aaaaaatcga ctccacattt cgcggcaata
      361 tcggcgccga agtgacggca gctatgcgcg ccagtcagcg aaaactggcc gttatcgctg
      421 ctgcgatccc tgcggccgga cgcacgacgc ttgaaggaaa atgtctggtt aatggcgccc
      481 cgctactgga aaccgaattt gctagcgatc cgaaaacgcc cattgtctct tcccgtattg
      541 ccgagatagt ggcgttgcaa agtgagatcc ctgtgtatga agtcttttta caggatgtcc
      601 gacgcggcgg gttaagcgcc ttacttacgg cttatgcggc tgagggcgaa gggattatcg
      661 tcgtggatgc ggtagaagag cgggacctga cgttgattgc gcaagcggcg tgcgaacaac
      721 cgtcgatgcc gctgctcgtc ggcgcagctg gtctggcgaa tgcgttgccg gttgaacttt
      781 ttatgcaaga ccggcagcgg ctaccggtac tggtggtagc cggttcgatg agcgaagcca
      841 cgcgacgtca ggtggataat gcgctgtgcc ggggacgtgc ggaggtcgtg gatatcgatg
      901 ccgcgcgcat ggtgtcggat agcgcggagc aggaaatcgc gtctgtcgta gagcaggcct
      961 gcgcgctgtt aagtcagcat cgacatacga ttttacgcac cagccgtcgc gcagaagatc
     1021 gacagttaat cgacgcgctg tgcgaaaaat ccgcgatgag ccgtcagcaa ttgggcgagc
     1081 gactgagtca tcggcttggc gtcgtcacgt taaatattat cgagcaggcg cggattggcg
     1141 ggctgtttct gaccggcggc gatatcgcta ccgccgtcgc cggcgcgctt ggcgctgaag
     1201 gttatcgcat tcagagcgag gtggcgccct gtattccctg tggaacgttt gtaaacagcg
     1261 aaattgacga tctgccggtc attaccaaag cgggcggatt cggttcagac agtacgttgt
     1321 gtgacgcgct ttattatatt gaggagatgt attgtggaga ctaaaaccgt tgccattacc
     1381 atgggcgatc cagcgggcat tgggccggaa attattgtta aagcgctaag tgaagacggt
     1441 ctcaacggcg cgccgctggt ggtgattgga tgcctcgcaa ccttgaaatg tttacaggcg
     1501 aagggcatca cgccgaacgt cgagttacgg gccattgaac gggtcgccga agcgcgtttt
     1561 gcgcccggca tcattcatgt gattgatgag ccgctggcgc agccggaggc gctggaggcc
     1621 gggaaagttc aggcgcaggc gggggattta gcgtatcgct gcgtgaagcg cgccaccgag
     1681 ttagcgttac ggggcgacgt acaggctatc gctaccgcgc cgctgaataa agaggcgctg
     1741 cacctggcgg ggcacaacta tccgggccat accgagctgc tcgcgactct gacccatagc
     1801 cgcgattacg cgatggtact ttacaccgat aaactaaaag tgattcacgt ttcaacgcat
     1861 atcgcgctgc gtaaattcct tgatacgtta agtaccacgc gtgtcgaaac ggtgattggt
     1921 attgctgata ctttcctcaa gcgtgtgggt tacgttaaac cgcgtatcgc cgtggcaggc
     1981 gtgaatcctc atgcgggcga gaatggtctg tttggcgatg aagagacgcg tatcctgacg
     2041 ccagccatta ccgatgcccg cgcaaaaggt atggacgttt atgggccgtg cccgccggat
     2101 actgtatttc tccaggctta tgagggacag tatgatatgg tggtggcgat gtatcatgac
     2161 caggggcata tcccgttgaa attgcttggc ttttatgatg gcgtgaatat caccgcaggg
     2221 ctgccgttta tccggacctc tgccgatcat ggcaccgcat ttgatatcgc ctggacggga
     2281 aaagcaaaat ctgagagcat ggccgtatcg atcaaactgg caatgcaact ggcataattc
     2341 cctgttatga aaggacaaca ccgtctggat ctcattgtgg cgtatctgaa aaaccatacg
     2401 ctggttacgg tagaacagct ggttgaggcg gttgacgcat cgccagccac tatccgtcgc
     2461 gatttgatca agctggatga gcagggcgtg atcagccgta gtcatggcgg cgtggcgctg
     2521 cggcgttttg aacccgccca gcccaccacc aatgaaaaac aactgcgatc gcccgctgaa
     2581 aaacgggcga ttgcacgcgt tgccgcatcg ctggtcaatg ctggcgatgc cgtcgtgctg
     2641 gatgccggta cgacaatgat ggaactggcg aaatgcttaa cccatcttcc gctgcgggtc
     2701 atcaccgtcg atctgcatat tgcgctgttt ttagctgagt tccggcaaat tgaagtgacg
     2761 attgtcggcg gtcgtatcga tgacagcagt cagtcctgta tcggtgagca tgggcgcaag
     2821 ctgttgcgca gcgtttatcc gaacatcgcg tttatgagct gtaattcatg gggggtaaaa
     2881 acgggcgtga cgaccccaac ggaagataag gccgggctta aacaggagat tattgctaat
     2941 gcgcagcgca aagtgttgct ggcggacagc agtaagtatg gcgcgcattc gctctttaat
     3001 gtggtgccgc ttgagcgctt taatgatgtg attaccgacg tcaatctgcc gccgtcagcg
     3061 caggttgaac taaaagggcg cgcttttgcg ctaacgctgg tgcagccgga gtgacagcgc
     3121 cgtcaggcgc tgccagtggt gaatcagacc gcagaaatat tgcggccgta gtaaatctcg
     3181 cgcatctctt tccacagcgc ggcggtgatc tgctggcgtt cggtttcagt gagatcttcc
     3241 ggtttggtgt gaaacatata gtgcttaaga tcgaactctt taagcagcat cttggtatgg
     3301 aaaatatttt cctgatacac gtttacatcc accatgtcat acagcgactt catatcttcc
     3361 gacataaaat tctgaatgga attaatctca tgatcgataa agtgtttcat accgttgacg
     3421 tcgcgcgtaa agccgcgcac gcggtaatcg atggtgacga tatcagactc tagctggtgg
     3481 atcaggtaat tgagcgcttt tagcggtgaa atcaccccgc aggttgacac ttcgatgtcg
     3541 gcgcgaaagg tgcaaagccc gccttccgga tggctttccg gataggtatg cacacagata
     3601 tggctcttat cgaggtgcgc caccacggtt tccggcagcg ggccgggatg ttcggtttgg
     3661 tcgataagtt tcgggtcgat cggctcttcg ctcaccagaa tcgtgacgct ggcgccctgg
     3721 ggttcataat cctgacgggc gatgttcagg atgttcgcgc cgataatgga gcaggtctcc
     3781 gacaggatct cggtcagtcg gttggcgtta tagagttcat cgatataggc gatatagcca
     3841 tcgcgctctt ctgcggtttt ggcgtagcag atatcgtaaa tacaaaaact caggcttttc
     3901 gtcagattgt taaagccatg cagtttcagc tttttcaatt tttatcacct ccttaacgtc
     3961 actgtgcgga cagtgcgtca tgtagatatt gcggtagcgc aaatgcagcg gcatgaatag
     4021 ccgagttgta atagcggcat ttgaggccgg cggcatgaaa acgcgcctga ataatttcgc
     4081 tcgacaggtg gcgaagagcg tcgttgtccg tcgcccaggc gaaggtcata atgccgccgt
     4141 aataggtcgg aatcgccgcc tggtagaagc cgacatcgct gaagtaatga ctcagcttgc
     4201 ggtggctgtc gagcgcttca tcctgttgca ggaagcacac gccgttctgg gcgacaaaaa
     4261 tgccgcccgg attcaggcaa cgcttacagc cttcataaaa ggcggaggta aacaggcttt
     4321 cgccggggcc tatcggatcg gtacagtcgg aaatgatcac atcaaaggtc tgatgggtct
     4381 gattgacgaa attcacgccg tcgtcgatca ccagcgtaaa gcgcggatcg tcgtagctgc
     4441 cggcattgtg gttgggtaaa tactggcggc aaaacgagac tacgccagcg tctatctcta
     4501 ccatggtgat ggtttcgacg tttttatgcc gggtaacttc acgtagcatt gcgccgtcgc
     4561 cgccgccgat aatcagaacg tgtttcgcat gaccgtgcgc cagcagcggg acatgggtca
     4621 tcatttcatg ataaataaac tcgtcgcgtt cggtggtctg taccacgccg tccagcgcca
     4681 tcacgcggcc aaaagcggcg ttttcaaaga tgattaaatc ctggtgatcg gttttttcat
     4741 gatacagaac gttgtctacg gcaaagtact gaccaaactg gtcgtgtagc gtttcatgcc
     4801 acatcgtatt ttcggccatt ggctgatacc tccattgtta acacccgtaa aaaaagggcg
     4861 caacatcata gctaacaatg accgtggatg cacggtcatt atttcagcaa taggatcgcg
     4921 gaggattatt taacgtaggc taacaggctc agagaatcgc gggccagagc tttgcatttt
     4981 ttagcgaccg gaataccgat gccgctaaga tcgcggtagc tgtcttcgcc caacgatttc
     5041 atatcgaagg tgtcgtagtt actcaggtcc cactgatttt gctgggcaaa aaagaccagc
     5101 gcacggcgaa tctgactgtt gggtaaattt tggtaaccac agtcattttt cagaaaaacg
     5161 aaaaccgccg ttaaatcggc catatcttca gcttcggatt cagtaagcgc atagctattt
     5221 gcgcataagg ccatcaggct gccaaacaac acgggtctga aaaacgtctt cattgcttct
     5281 accacggcat cagggaaagt caacgttagc atactgagaa cgtagcgacg acttttatta
     5341 tcaggattgg tcgcggcgtt ttcattcttg ttgtattgct gtcaggaacg gtaaagacgt
     5401 gttgctggct tgaccttccc gttagggcag ggtctaagct tagacacccg cctgttcatt
     5461 ataaggaaat gattatgtta cgccgtgatt tcttaaaata ttcagtggcg ctgggggttg
     5521 catcagcgct gccgctgtgg agccgcgccg cttttgccgc cgaacgtccc gcgttgccta
     5581 ttcctgacct gttaacggca gatgcgagca accgtatgca gttaattgtt aaagccggac
     5641 agtcgacatt cgccggtaag aacgcgacaa cctggggcta caacggtaat ttgctggggc
     5701 cagcggtaca gcttcacaaa ggaaaaagcg tgaccgttga tatccataac caactggccg
     5761 aagacacgac gcttcactgg catggtctgg agattccggg catcgttgac ggcggcccgc
     5821 aggggattat tcccgctggc ggaacccgca cggtgacgtt tacgccgcag caacgcgccg
     5881 cgacctgctg gattcatccg cacaaacacg gcaaaaccgg gcgccaggtg gcgatgggcc
     5941 tcgccggact ggtgctgatt gaagatgacg agattcgcaa attgcgcctg ccgaaacagt
     6001 ggggtatcga cgatgtgccg gtgatcattc aggacaaacg cttctccgcc gatggccaga
     6061 ttgattatca actggatatt atgaccgccg ccgtcggctg gtttggcgat acgctgctga
     6121 ccaatggcgc tatctatccg cagcattccg cgccgaaagg ctggctacgt ctgcgcttgc
     6181 tgaatggctg taatgcgcgt tcgctgaata tcgccgccag cgataatcgt ccgctttatg
     6241 tgatcgccag cgacggcggc ctgctggcgg agccggtgaa agtcaccgaa ctgccgttat
     6301 taatgggcga gcgttttgaa gtgctggtgg atatcagcga cgggaaagcc tttgatctgg
     6361 tgaccctgcc ggtcagccag atgggaatgg cgatcgctcc gtttgataaa ccgcatccgg
     6421 tgatgcgtat ccagccgctg cggattaccg cctccggtac gctgccggat acgttgacga
     6481 cgatgccggc gctgccgtcg ctggaagggc tgacggtgcg caacctgaaa ctgtcgatgg
     6541 acccgcgcct tgatatgatg gggatgcaaa tgctgatgaa gaaatatggc gctcaggcga
     6601 tgagcggcat ggatcatgac agcatgaacg cgcatatgca gggcggcaat atggggcatg
     6661 gcgagatgga tcatggcaac atggatcaca gcgggatgaa tcatggcgcg atgggcaata
     6721 tgaatcacgg cggaaaattc gacttccata acgctaactt tatcaacggc caggtcttcg
     6781 atatgaacaa accgatgttc gcggcgcaaa aaggccgaca tgaacgttgg gtgatttccg
     6841 gcgtgggtga catgatgctg catcctttcc atattcacgg cacccagttc cgtattttgt
     6901 cagagaacgg caaagcgcca gcggcgcaca gaacgggctg gaaggatacg gtacgcgttg
     6961 agggcggtat cagcgaagtg ctggtcaagt tcgatcacga cgcgccgaag gaacatgcct
     7021 atatggcgca ctgtcatctg ttagaacatg aagatacggg aatgatgtta ggatttacgg
     7081 tctaatcgat gtctgtgacg caggccgggt aaggcgaaac cgctacccgg cacaatgccc
     7141 ggcatacgcc gggcattaat ggttatttcg cgtcgtcagg caaagcatag gccacgatat
     7201 agtcgcccat cttcgtacca aacgaaccgt ggcctccggc agaaatgacc acgtactgct
     7261 taccgtttac ctcataggtc atcggcgttg cctggcctcc ggcgggtaaa cgtccctgcc
     7321 acagtttttc cccgttgctc atgttataag cgcgcaggta gttgtcggcg gtcgcggcaa
     7381 tgaacagcac gttaccggcg gttgagattg gcccgcccag catgggcatc cccatgttga
     7441 acggcaccgg aaccggcatc gggaacggca tactgtcgcg cggcgtccct atacgtttct
     7501 tccacacgat ttcattggtc ttcagatcca acgcggaaat gtagccccag gccggttgtt
     7561 tacacggcaa accaaacggc gaaaggaacg gattcagcgt gacgccgaac ggtacgccgt
     7621 actgcggctg aatacccgct tctgtaccgg tacctttcgc gtctttcggc ggttccattg
     7681 gattacccgg gccgcgtggg atcagcttcg agacaaacgg cagcgccatc gggttagcga
     7741 tagcgacctg acggtctgga tcgacggaaa taccgcccca ttcaaacatc cccaggttgc
     7801 cagggaatac caatgtcccc tgctcggatg gcggggtgaa gataccttca tagcgcaact
     7861 ggtggaacat aacgcggcac accagttggt cgaacatggt cgcgccccac atatccgcgc
     7921 cggagagatc ttttttcggg cggaaggtta aatcagagaa cggctgagtt ttggcgacat
     7981 aatcgccttt tgccgcgccc tgcgggaccg gtttttccgg agcgggcacg accagctcgc
     8041 cattacgtct gtccagcaca aagatattac cggttttcgc tggtgcatag ataaccggaa
     8101 cggtagtacc gtcaacggta atatccgcca gcgtcggctg tgccggcagg tccatatccc
     8161 acagatcgtg atggacggtc tgataactcc aggccagttt cccggtggtg gcattcagcg
     8221 ccaggatgga gctggcataa cgttcctgct ccggcgtgcg gttaccgccc cagatatccg
     8281 gcgtggtcac gcccatcggc agatagacca gatccagttt cgcatcatag gcggcagggg
     8341 cccaggagtt cggcgagtta aaggtaaaag cgtgctcatc ggctggaatc gtgttcggat
     8401 ctttcgcccc aggatcgaag gcccacagta gtttaccgct attaacatca aaaccacgga
     8461 taacgccgga cgtttcgcga gtagagaagt tatccgtgac cgaaccggca atgacaattg
     8521 ttttatcggt gataatcggc ggcgacgtcg gttcatacag tcccggcgtg gtatccggca
     8581 tattggtttg cagattcagg acgcctttgt tggcgaaggt ttcacacagc ttgccggttt
     8641 cggcattcac cgcgaaaagg cgaccgtcgt tgaccgggag gataatgcgg ctcggacagt
     8701 cggcgatgac ctccggcgag gcggtatccg ctttggcctc atgataagag acgccgcggc
     8761 aggtcacatg ctggaaagac gaatcggtct tcaactgagg atcaaaatgc cacttctctt
     8821 taccgctggc ggcgtccagc gcgaacagac gctggtgagc tgtacacaga taaagcgtat
     8881 caccgacttt tatcggggtc acttcgttgg tgatttcacc cggatcgttg ggttgtttca
     8941 gatcgccggt gcggaagacc cacgcttctt tcagttggtg aacgttatcc gcagtgatct
     9001 gtttcagcgg cgaatagcgt tggccttcct gattacgtcc ataggccggc cagtcttcgt
     9061 cggcgatcga cgaacttgtt gcggcgggcg tgg
//
LOCUS       DAGWFR010000161         8992 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.163, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000161 DAGWFR010000000
VERSION     DAGWFR010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 8992)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8992)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8992
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.163"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..331
                     /locus_tag="MOX77_003731"
     CDS             <1..331
                     /locus_tag="MOX77_003731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HCA3359151.1"
                     /translation="LALVGDAAHTIHPLAGQGVNLGYRDVDALIDVLASARSYGESWA
                     SHSVLKRYQTRRMADNFMMQSGMDLFYAGFSNELPPLRILRNMGLMAAQRAGVLKRQA
                     LKYALGL"
     gene            complement(464..538)
                     /locus_tag="MOX77_003732"
     tRNA            complement(464..538)
                     /locus_tag="MOX77_003732"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(504..506),aa:Gln,seq:ctg)
     gene            complement(585..661)
                     /locus_tag="MOX77_003733"
     tRNA            complement(585..661)
                     /locus_tag="MOX77_003733"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(625..627),aa:Met,seq:cat)
     gene            complement(677..751)
                     /locus_tag="MOX77_003734"
     tRNA            complement(677..751)
                     /locus_tag="MOX77_003734"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(717..719),aa:Gln,seq:ttg)
     gene            complement(787..861)
                     /locus_tag="MOX77_003735"
     tRNA            complement(787..861)
                     /locus_tag="MOX77_003735"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(827..829),aa:Gln,seq:ttg)
     gene            complement(885..969)
                     /locus_tag="MOX77_003736"
     tRNA            complement(885..969)
                     /locus_tag="MOX77_003736"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(933..935),aa:Leu,seq:tag)
     gene            complement(978..1054)
                     /locus_tag="MOX77_003737"
     tRNA            complement(978..1054)
                     /locus_tag="MOX77_003737"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1018..1020),aa:Met,seq:cat)
     gene            complement(1276..2940)
                     /gene="asnB"
                     /locus_tag="MOX77_003738"
     CDS             complement(1276..2940)
                     /gene="asnB"
                     /locus_tag="MOX77_003738"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001724523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase B"
                     /protein_id="HCA3359152.1"
                     /translation="MCSIFGVFDIKTDAAELRKKALELSRLMRHRGPDWSGIYACDNA
                     ILAHERLSIVDVNAGAQPLYNAKKTHVLAVNGEIYNHQTLRAEYGDRYAFQTGSDCEV
                     ILALYQEKGPDFLDDLQGMFAFALYDSEKDAYLIGRDHIGIIPLYMGYDEFGNFYVAS
                     EMKALTPVCRTIKEFPAGSYLWSKDGEIRQYYQRDWFDYDAVKDNVTDKNALRQALEE
                     SVKSHLMSDVPYGVLLSGGLDSSVISAITKKFAARRVEDQERSEAWWPQLHSFAVGLE
                     GSPDLKAAQEVANHLGTVHHEIHFTVQEGLDAIRDVIYHIETYDVTTIRASTPMYLMS
                     RKIKAMGIKMVLSGEGSDEVFGGYLYFHKAPNAKELHEETVRKLQALHMYDCTRANKA
                     MSAWGVEARVPFLDKKFLDVAMRINPQDKMCGNGKMEKHVLRECFESYLPASVAWRQK
                     EQFSDGVGYSWIDTLKEVAAKQISDQQLETARFRFPYNTPSSKEAYLYREIFEELFPV
                     PSAAECVPGGPSVACSSAKAIEWDEAFKTMDDPSGRAVGVHQSAYQ"
     gene            complement(3230..3982)
                     /gene="nagD"
                     /locus_tag="MOX77_003739"
     CDS             complement(3230..3982)
                     /gene="nagD"
                     /locus_tag="MOX77_003739"
                     /EC_number="3.1.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007373873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide monophosphatase NagD"
                     /protein_id="HCA3359153.1"
                     /translation="MTIKNVICDIDGVLMHDNVAVPGAAEFLTGILEKGLPLVLLTNY
                     PSQTGQDLANRFATAGVNVPDSVFYTSAMATADFLRRQEGKKAYVVGEGALIHELYKA
                     GFTITDVNPDFVIVGETRSYNWDMMHKAAFFVANGARFIATNPDTHGRGFYPACGALC
                     AGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETI
                     LVLSGVSTINDIDSMPFRPSWIYPSVAEIDVI"
     gene            complement(4029..5249)
                     /gene="nagC"
                     /locus_tag="MOX77_003740"
                     /gene_synonym="nagR"
     CDS             complement(4029..5249)
                     /gene="nagC"
                     /locus_tag="MOX77_003740"
                     /gene_synonym="nagR"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator NagC"
                     /protein_id="HCA3359154.1"
                     /translation="MTPGGQAQIGNVDLVKQLNSAAVYRLIDQHGPISRIQIAEQSQL
                     APASVTKITRQLIERGLIKEVDQQASTGGRRAISIVTETRNFHAIGVRLGRHDTTLTL
                     YDLSSKVVAEEHYPLPERTQETLEHALLNTIAVFIDSCQRKIRELIAISVILPGLVDP
                     ESGVIRYMPHIQVENWGLVEALEKRFHVTCFVGHDIRSLALAEHYFGASQDCEDSILV
                     RVHRGTGAGIISNGRIFIGRNGNVGEIGHIQVEPLGERCHCGNFGCLETIAANAAIEQ
                     RVLNLLKQGYQSRVPLDDCTIKTICKAANRGDSLASEVIEHVGRHLGKTIAIAINLFN
                     PQKIVIAGEIIEADKVLLPAIESCINTQALKAFRKNLPVVRSTLDHRSAIGAFALVKR
                     AMLNGTLLQRLLES"
     gene            complement(5254..6408)
                     /gene="nagA"
                     /locus_tag="MOX77_003741"
     CDS             complement(5254..6408)
                     /gene="nagA"
                     /locus_tag="MOX77_003741"
                     /EC_number="3.5.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine-6-phosphate deacetylase"
                     /protein_id="HCA3359155.1"
                     /translation="MYALTQGRIFTGHEILDDHALVVANGLIDRVCPMAELPPGIEQR
                     SLNGAILSPGFIDVQLNGCGGVQFNDTAEAVSVETLEIMQKANEKSGCTNFLPTLITT
                     SDELMKQGIRVMREYLEKHPHQALGLHLEGPWLNLVKKGTHNPDFVRKPDAALVDFLC
                     DNADVITKVTLAPEMVPADVIAKLANAGIVVSAGHSNATLKEAKAGFRAGITFATHLF
                     NAMPYITGREPGLAGAVLDEADIYCGVIADGLHVDYANIRNAKRLKGDKLCLVTDATA
                     PAGANIEQFIFAGKTIYYRNGLCVDENGTLSGSSLTMIEGVRNLVAHCGIALDEVLRM
                     ATLYPARAIGVDKHLGSIAPSKVANLTAFTHDFKIIKTIVNGDEVVDLSK"
     gene            complement(6468..7268)
                     /gene="nagB"
                     /locus_tag="MOX77_003742"
     CDS             complement(6468..7268)
                     /gene="nagB"
                     /locus_tag="MOX77_003742"
                     /EC_number="3.5.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008805656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-6-phosphate deaminase"
                     /protein_id="HCA3359156.1"
                     /translation="MRLIPLSTAEQVGKWAARHIVNRINAFKPTTDRPFVLGLPTGGT
                     PLTAYKALVEMHKAGEVSFKHVVTFNMDEYVGLPKEHPESYHSFMHRNFFDHVDIPAE
                     NINLLNGNAPDIDAECRQYEEKIRSYGKIHLFMGGVGNDGHIAFNEPASSLASRTRIK
                     TLTHDTRVANSRFFDGDVNQVPKYALTVGVGTLLDAEEVMILVLGHQKAQALQAAVEG
                     NVNHMWTISCLQLHPKAVVVCDEPSTMELKVKTLKYFNELEAENIKGL"
     gene            7595..>8992
                     /gene="nagE"
                     /locus_tag="MOX77_003743"
     CDS             7595..>8992
                     /gene="nagE"
                     /locus_tag="MOX77_003743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS N-acetyl glucosamine transporter subunit
                     IIABC"
                     /protein_id="HCA3359157.1"
                     /translation="MNILGFFQRLGRALQLPIVVLPVAALLLRFGQPDLLNMPFIAQA
                     GGSIFDNLALVFAIGVASSWSKDSAGAAALAGAVGYFVMTKAMVTINPEINMGVLAGI
                     ITGLVGGAVYNRWSGIKLPDFLSFFGGKRFVPIATGFFCLVLAAIFGYVWPPVQHGIH
                     AGGEWIVSAGALGSGIFGFINRLLIPTGLHQVLNTIAWFQIGEFTNAAGTVFHGDINR
                     FYAGDGTAGMFMSGFFPIMMFGLPGAALAMYFAAPKERRPMVGGMLLSVAITAFLTGV
                     TEPLEFLFMFLAPLLYLLHAILTGISLFVATLLGIHAGFSFSAGAIDYVLMYNLPAAS
                     NNVWMLLVMGVVFFIIYFLLFSAVIRMFNLKTPGREDKVDEMVTEEANSNTEEGLTQL
                     ATSYIAAVGGTDNLKAVDACITRLRLTVNDSARVNDAACKRLGASGVVKLNKQTIQVI
                     VGAKAESIGDEMKKVV"
BASE COUNT         2015 a         2318 c         2416 g         2243 t
ORIGIN      
        1 gctggcgctg gtaggcgacg cggcgcatac cattcatccg ctggccgggc agggcgtcaa
       61 cctggggtat cgggatgttg atgcgttgat tgatgtgctg gcgagtgccc gtagctatgg
      121 cgagtcctgg gccagccatt cggtgttgaa acgctatcag acgcggcgca tggcagataa
      181 ttttatgatg caaagtggaa tggatctgtt ttatgccggg ttcagcaatg aactgccgcc
      241 actgcgtatt ttacgcaata tggggctaat ggcggcgcag cgcgcaggcg tgctaaaacg
      301 tcaggcgctg aagtatgcgt tggggttgta gtttgtgtta tgccgggtgg cggctatacc
      361 ttacccggcc tgtattcgcc cgtaggcctg ataagcgtag cgccatcagg ctgtccgaat
      421 tgccagaaaa gcaaaaagct cgccgaagcg agctttttaa aagtggctgg ggtacgagga
      481 ttcgaacctc ggaatgccgg aatcagaatc cggtgcctta ccgcttggcg ataccccaac
      541 aaattatttt cgaaccggtc gaatacctcg acgcgttctg aatatggtgg ctacgacggg
      601 attcgaacct gtgaccccat cattatgagt gatgtgctct aaccaactga gctacgtagc
      661 cagatgattt cttcgatggc tggggtacct ggattcgaac cagggaatgc cggtatcaaa
      721 aaccggtgcc ttaccgcttg gcgatacccc aataccgtcg cggtgaaccg caaactcgaa
      781 gaaatatggc tggggtacct ggattcgaac cagggaatgc cggtatcaaa aaccggtgcc
      841 ttaccgcttg gcgatacccc atccgtacaa cgcttatcgg tgaatggtgc gggaggcgag
      901 acttgaactc gcacaccttg cggcgccaga acctaaatct ggtgcgtcta ccaatttcgc
      961 cactcccgca aaaaagatgg tggctacgac gggattcgaa cctgtgaccc catcattatg
     1021 agtgatgtgc tctaaccaac tgagctacgt agccatcttt tttcgcgtta ccttatcggc
     1081 gttgcggggc gcattatgcg tattgagcct tgaagcgtca acctcttttt catcgaaaaa
     1141 cgtcggaaag tgtctgtttg gttaggttgc gaacagcgtg gcgcaatatt cggcaattat
     1201 tggttattaa tcgtttttcc gaaagtgggt tgctataaaa aaagagcccc taggggctct
     1261 ttcgtcatcg ttaatttact ggtacgccga ctgatgcacg ccgaccgcgc ggcctgacgg
     1321 gtcatccatc gttttgaatg cttcatccca ctcaatggct ttggcggaag aacaggccac
     1381 ggacgggccg ccgggtacgc attccgcggc gctcggcacc gggaacaatt cttcaaaaat
     1441 ttcccggtac aagtacgcct ctttagacga cggcgtgttg tatggaaagc ggaagcgggc
     1501 tgtttccagt tgttgatcgg aaatctgttt cgccgccacc tctttcagcg tatcaatcca
     1561 gctgtagcct acgccgtcag agaactgctc tttctgacgc cacgccacgc ttgctggcag
     1621 ataagactcg aagcactcgc gcagcacgtg tttttccatc ttgccgttgc cgcacatttt
     1681 atcctgtggg ttgatacgca tcgccacgtc gaggaatttt ttatccagga acggtacgcg
     1741 cgcttccacg ccccaggcgg acatcgcttt gttggcgcgg gtgcagtcat acatatgcag
     1801 cgcctgtagc ttacggaccg tctcttcatg taactctttg gcgttcggcg ctttatggaa
     1861 gtacaggtag ccgccaaaca cctcatcaga accttcgccg gagagcacca ttttgatgcc
     1921 catcgctttg atcttacgcg acatcagata cattggcgtt gaggcgcgga tagtggttac
     1981 gtcataggtt tcaatgtggt aaatcacgtc gcgaatcgca tccagaccct cctggacggt
     2041 gaagtgaatt tcatgatgca cggtgccgag gtggttagcc acttcctggg ccgccttcag
     2101 gtcaggcgaa ccttccagac ctaccgcaaa agagtgcaac tgtggccacc aggcttcgga
     2161 gcgctcctga tcttcgacgc gacgggcggc gaattttttg gtgattgccg agataaccga
     2221 cgagtccagg ccgccggaga gcagtacgcc gtagggcacg tcggacatca ggtggctttt
     2281 cacggattct tccagcgcct gacgcagcgc gtttttgtcg gtgacgttat cttttaccgc
     2341 atcgtaatcg aaccagtcgc gctgatagta ctgacgaatt tcgccgtctt tgctccacag
     2401 gtagctgccc gccgggaact ctttaatggt gcggcagacc ggagtcagcg ctttcatttc
     2461 tgacgctacg tagaagttgc cgaattcgtc atagcccatg tagagcggaa taataccgat
     2521 atggtcacga ccaatcagat aagcgtcttt ttcgctgtca tacagggcga aggcgaacat
     2581 cccctgtaaa tcgtcaagga aatccggccc tttttcctga tatagcgcga gaataacttc
     2641 gcagtcggag ccagtctgga acgcgtaacg atcgccatac tccgcgcgta acgtctgatg
     2701 gttataaatt tcaccgttca ccgccagcac gtgagttttc ttagcgttat acaggggctg
     2761 ggcgccggcg ttaacatcaa caatcgacaa gcgttcatgt gcgagaatcg cgttatcgca
     2821 agcgtagatg ccggaccagt ccgggccgcg atggcgcatc aggcgtgaca attcaagggc
     2881 ttttttacgc agttccgctg catctgtttt gatatcgaat acgccgaaaa tagaacacat
     2941 agccttctcc gttaatctgt tgcgtcgtac tttttgtgtt tgcttgacta aaaaatgccg
     3001 caaaggcgtg gaaggcgcaa ggggattacg gtctgaaaaa tgaaaaacgc aatcgtcatt
     3061 gttgattagt gaaaaatgat tacgtattgc gcgaatttat tgatgaatct tcagttttat
     3121 agtggtttaa ttgaattatg tttttcctga tgacgtttcg cttatcaggc ctacaatgtt
     3181 gttcgaaccg taggcctgaa agcggcgcgt catcaggcag gggacaggtt tagataacgt
     3241 ctatctcggc gacggaaggg taaatccagc ttgggcggaa cggcatactg tcaatatcat
     3301 tgattgttga tacgcctgaa agcaccagaa tggtctccag accggcctgg aaccccgcca
     3361 gaatgtcggt gcgcaggttg tcgccgacga taacggtctc ttccgagtgc gcctgcattt
     3421 tgtttaacgc cgcgcggatg atccacgggc tgggtttgcc gacataaaac ggcttccggc
     3481 cggaaatttt ttcaatgcct gcgcacagcg cgccgcaggc cggataaaag ccgcgaccgt
     3541 gggtatccgg gttggtggcg ataaagcgcg cgccattagc gacgaaaaat gctgctttat
     3601 gcatcatgtc ccagttgtag gagcgggtct ctccaacgat gacaaaatca gggtttacat
     3661 cggtaatggt aaaacccgct ttatagagct cgtgaataag cgcgccttcg cccacgacat
     3721 acgctttttt accttcctga cggcgcagaa aatcggctgt cgccattgct gacgtataaa
     3781 acacgctgtc cggcacgtta acgccagcgg tagcaaaacg gttcgccaga tcctggccgg
     3841 tttgcgacgg gtaattggtc agcagcacca gcggcagacc tttttccaga atccccgtca
     3901 gaaattccgc cgcaccgggt acggctacgt tgtcgtgcat cagcacgccg tcgatatcgc
     3961 agattacatt cttgatggtc atgaactacc cagggaattt gtgaataatc cgatactata
     4021 agagcgcatc agctttccag caaacgttgc agcaatgttc cgttgagcat ggcgcgttta
     4081 actaaggcaa atgcgccgat agcagaacgg tgatccagcg tggagcgtac caccggcaaa
     4141 tttttgcgaa aggcctttaa cgcctgcgta ttgatacagc tttcgatagc gggcaacagg
     4201 actttatcgg cttcaatgat ctcgccggca atgacgattt tttgcggatt aaacaggttg
     4261 atagcaatgg cgatcgtttt gcccaaatgg cggccaacat gctcaatgac ttccgaggcc
     4321 aggctgtcgc cccggtttgc cgccttacag atggttttaa tcgtgcagtc gtcaagcgga
     4381 acacggcttt gatacccttg tttaagcaaa ttcagcaccc gttgttcaat cgccgcattg
     4441 gcggcaatgg tttccagaca gccgaaatta ccgcagtggc agcgctcgcc caacggctcc
     4501 acctgaatat gcccaatttc gccgacgttg ccgttacggc caatgaagat gcgtccgttg
     4561 gagataatcc cggcacctgt accacgatgg acgcgcacca gaatcgagtc ctcgcaatcc
     4621 tgactggcgc cgaagtagtg ttccgccagt gccaggctac gaatatcgtg acccacgaaa
     4681 caggtaacgt gaaaccgttt ttccagcgct tcgaccagtc cccagttttc aacctgaatg
     4741 tgcggcatgt aacgaatcac gccgctttcc ggatcgacaa gccctggcag gatcaccgag
     4801 atagcgatca attcacgaat tttacgctga caactatcaa taaagacggc gatagtgttg
     4861 agcagcgcat gttccagcgt ctcctgggtg cgctccggca gcggataatg ctcctcagcg
     4921 accactttac tgctcagatc gtagagcgtt aaagtggtgt catgacgccc caggcgaacg
     4981 ccaatggcgt ggaagttacg ggtttccgtg acgatagaga tagcgcggcg gcctccggta
     5041 gaggcctgct gatcgacttc tttgatcagc ccgcgttcaa tgagttgacg cgtaattttc
     5101 gttacgctgg cgggagcaag ctggctttgc tcggcaattt gtatgcgcga gataggacca
     5161 tgctggtcaa tcaggcggta aacggccgcg ctgttaagct gttttacgag atcaacgtta
     5221 cctatctgag cttgtccgcc tggtgtcata ttctcactta ctcaagtcaa cgacctcgtc
     5281 accattaacg atggtcttga taattttaaa atcgtgggtg aacgcggtca ggttggcgac
     5341 tttactcggc gcaatgctac cgagatgctt atcaacgccg atagcgcgtg ccggatagag
     5401 cgttgccatg cgcagcactt catccagcgc gatgccgcaa tgcgcgacca ggttgcgtac
     5461 gccttcaatc atggttaagg acgaaccgct caacgtaccg ttttcatcca cacacagtcc
     5521 attgcggtag tatattgttt tacctgcgaa aatgaactgc tcaatattgg cccccgccgg
     5581 tgcggtggcg tctgtcacca gacaaagttt gtcgcctttc aggcgtttgg cattgcgaat
     5641 gttggcgtag tcgacatgca gaccatcggc gataacgccg caataaatat ccgcttcgtc
     5701 cagaacagcg ccagcaaggc ccggctcacg ccctgtaatg tacggcatcg cgttaaacag
     5761 gtgagtcgca aaggtaatcc cggcgcggaa gcccgctttt gcctctttta acgtcgcgtt
     5821 ggagtgacct gcggaaacca caatgcccgc attcgccagt ttagcgatta cgtcagcagg
     5881 caccatttcc ggcgcgagag tgactttggt gatgacgtcg gcattatcgc ataagaaatc
     5941 gaccagcgca gcgtctggtt tacgcacgaa atcaggatta tgggtgcctt tttttaccag
     6001 attaagccag gggccttcca ggtggagacc cagcgcctgg tgcggatgtt tttccagata
     6061 ctcgcgcatg acgcgaatac cctgtttcat caattcgtcg ctggtagtga taagcgttgg
     6121 cagaaagtta gtacagcccg atttttcatt ggctttctgc ataatttcca gcgtttcaac
     6181 gctgacggct tctgcggtat cgttaaactg cactccgccg cagccgttta gctgcacatc
     6241 aataaaaccg ggggagagaa tggccccatt caatgagcgt tgttctattc ccggcggcag
     6301 ctcggccatc ggacaaacgc ggtcaatcag gccattagcg acaacaagcg catggtcatc
     6361 aagaatttcg tgaccggtaa agatccggcc ctgggttaaa gcatacattc tgacccccga
     6421 tatcaaaaat ttaccgcccc gcattgactg gcggggcgga gacaacatta cagaccttta
     6481 atattttctg cttctaattc attgaaatat ttcaatgttt taactttaag ttccattgtg
     6541 gacggctcat cgcataccac aaccgctttc ggatggagtt gcaggcagct aatggtccac
     6601 atgtggttga cgttgccttc aaccgccgcc tgcagcgcct gggctttctg atggcccagc
     6661 accagaatca tcacttcttc cgcatccagc agcgtaccca cgcctaccgt cagcgcgtat
     6721 ttcggcacct ggtttacgtc gccgtcaaag aagcgggagt tcgctacgcg agtatcatgg
     6781 gttaacgttt tgatacgggt acgggaagcc agggaagacg ccggttcgtt aaaggcgatg
     6841 tgaccgtcgt tgccgacgcc gcccataaac agatggattt taccgtaaga acgaattttt
     6901 tcttcatatt gacggcattc tgcatcgata tccggtgcgt taccgttgag aagattgatg
     6961 ttttctgctg gaatatcaac gtgatcgaaa aagttacgat gcataaagct gtggtagctt
     7021 tccgggtgct ctttcggcag gccaacatat tcgtccatat taaaggtgac cacatgctta
     7081 aagctgacct cgcccgcttt gtgcatctca accagcgctt tgtacgccgt tagcggcgtg
     7141 ccgccggtag gcagtccaag aacaaacgga cgatcggtgg tcggtttgaa cgcattaata
     7201 cggttaacga tatggcgagc ggcccatttg ccaacctgtt ctgcggtact cagggggatc
     7261 agtctcattc ttcacctcaa taatcaatgt caaaatttgg cggatcgtat taagcgtaac
     7321 ctggatatcc agggttcgtg ttcaatccgt cctgattttt tgaatcataa aataagtttt
     7381 ccgtgttagc cagtggatgg tgggggtgat tacgatattt agtgattata atcacaaaaa
     7441 acacccgttt aatttgcgag gcgaattaat tttccacaca ctctgcagaa gatgatctca
     7501 ccgttcgatt acagaacatc acgtttttaa cgtttgcagc acaataaaaa acggcttcaa
     7561 agaagccata tcggcgtctc gtagggggaa taagatgaat attttaggtt ttttccagcg
     7621 gctgggtagg gcgttgcagc tccctatcgt cgtgttgccg gtggcagcgt tgttgctgcg
     7681 attcggccaa ccagatttgc tgaatatgcc gtttatcgcg caagcgggcg ggtctatttt
     7741 cgataacctg gcgctggttt tcgctatcgg cgtggcctcc agttggtcta aagatagcgc
     7801 aggcgcggca gcactggcgg gagccgtggg ttacttcgtc atgaccaaag cgatggtgac
     7861 gattaacccg gaaatcaaca tgggcgtgct ggcggggatt attaccggtc tggtcggcgg
     7921 cgcggtttat aatcgctggt ctggtatcaa actgcctgat tttctcagtt tcttcggtgg
     7981 aaaacgtttt gtgccgatcg caacgggctt tttctgtctg gtgctggccg ctattttcgg
     8041 ttacgtctgg ccgccggtac agcatggcat ccatgcgggc ggtgaatgga tcgtttccgc
     8101 aggcgcgttg ggttccggta tctttggctt catcaaccgt ctgctgatcc ccaccggtct
     8161 gcatcaggta ctgaacacca tcgcctggtt ccagattggc gaattcacca atgccgcagg
     8221 cactgtattc cacggcgaca tcaaccgctt ctatgctggc gacggcacgg cggggatgtt
     8281 tatgtccggc ttcttcccga tcatgatgtt tggtctgccg ggcgccgctc tggcgatgta
     8341 tttcgccgcg ccgaaagaac gtcgtccgat ggtgggcggt atgctgctgt ctgtcgcgat
     8401 caccgcgttt ctgaccggcg taaccgagcc gctggaattc ctgtttatgt tcctggcgcc
     8461 gctgctgtac ctcctgcacg ccattttgac tggtatcagc ctgttcgtcg cgacgttgct
     8521 gggtatccat gcgggcttct ctttctcggc aggcgcgatc gactatgttc tgatgtataa
     8581 cctgcctgcg gccagcaata acgtctggat gttgctggtg atgggcgttg tattctttat
     8641 catctacttc ctgctgttca gcgcggttat tcgtatgttt aacctgaaaa cgccgggccg
     8701 cgaagataaa gttgatgaga tggtaacgga agaagccaac agcaacaccg aagaagggtt
     8761 aacgcaactg gcgaccagct atattgctgc ggttggcggt acggacaacc tgaaagcggt
     8821 cgatgcgtgc attacccgtc tgcgcctgac cgtgaacgac tctgctcgcg tcaacgatgc
     8881 ggcctgcaaa cgcctcggcg cttccggcgt ggtgaaactg aacaaacaga ccattcaggt
     8941 tattgtcggc gcgaaagcgg aatcgattgg cgatgaaatg aagaaagtgg tg
//
LOCUS       DAGWFR010000162         8927 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.164, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000162 DAGWFR010000000
VERSION     DAGWFR010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 8927)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8927)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8927
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.164"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..854)
                     /locus_tag="MOX77_003744"
     CDS             complement(<1..854)
                     /locus_tag="MOX77_003744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homocysteine S-methyltransferase family protein"
                     /protein_id="HCA3359158.1"
                     /translation="MSSKVEQLRAQLNERILVLDGGMGTMIQSYRLHEEDFRGERFAD
                     WPCDLKGNNDLLVLSKPEVIAAIHNAYFEAGADIIETNTFNSTTIAMADYRMESLSAE
                     INYAAAKLARACADEWTARTPEKPRFVAGVLGPTNRTASISPDVNDPAFRNITFDQLV
                     AAYRESTKALVEGGADLILIETVFDTLNAKAAVFAVKEEFEALGVDLPIMISGTITDA
                     SGRTLSGQTTEAFYNSLRHAEALTFGLNCALGPDELRQYVQELSRIAECYVTAHPNAG
                     LPNAFGEY"
     gene            1158..1982
                     /gene="iclR"
                     /locus_tag="MOX77_003745"
     CDS             1158..1982
                     /gene="iclR"
                     /locus_tag="MOX77_003745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxylate bypass operon transcriptional
                     repressor IclR"
                     /protein_id="HCA3359159.1"
                     /translation="MVAPVPAKRGRKPAATTAPVTGQVQSLTRGLKLLEWIAESNGSV
                     ALTELAQQAGLPNSTTHRLLTTMQQQGFVRQVGELGHWAVGAHAFIVGSSFLQSRNLL
                     AIVHPILRKLMEDSGETVNLAVLDQSDHQAIIIDQVQCTQLMRMSAPIGGKLPMHASG
                     AGKAFLSQLSEEQVTSLLHRKGLHAYTHATLVSPLHLKDDLAQTRKRGYSFDDEEHAL
                     GLRCVASCIYDEHREPFAALSISGPCSRITDDRVTELGAMVIKAAKEVTLAYGGFR"
     gene            complement(2027..3808)
                     /gene="aceK"
                     /locus_tag="MOX77_003746"
     CDS             complement(2027..3808)
                     /gene="aceK"
                     /locus_tag="MOX77_003746"
                     /EC_number="2.7.11.5"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005224531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional isocitrate dehydrogenase
                     kinase/phosphatase"
                     /protein_id="HCA3359160.1"
                     /translation="MPRGLELLIAQTILQGFDAQYGRFLEVTSGAQQRFEQADWHAVQ
                     QAMKSRIHLYDHHVGLVVEQLRCITDGKSTDADFLLRVKEHYTRLLPDYPRFEIAESF
                     FNSVYCRLFDHRSLTPERLFIFSSQPERRFRTIPRPLAKDFFPDHGWEPLLMRILSDL
                     PLCLPWQNKSRDIRYIIAHLTETLGEDALPRCHVQVANELFYRNKAAWLVGKLTTPDG
                     TLPFLLPIHRTDEGELFVDTCLTTTAEASIVFGFARSYFMVYAPLPAALVEWLREILP
                     GKTTAELYMAIGCQKHAKTESYREYLCYLAESDEKFIEAPGIRGMVMLVFTLPGFDRV
                     FKIIKDKFAPQKEMSAAHVRACYQLVKEHDRVGRMADTQEFENFVLDKRQIDPALMAL
                     LRQEAPEKITDLGEHIVIRHLYIERRMVPLNIWLEQVEGQQLRDAIEEYGNAIRQLAA
                     ANIFPGDMLFKNFGVTRHGRVVFYDYDEICYMTEVNFRDIPPARYPEDELASEPWYSV
                     SPGDVFPEEFRHWLCADPRIGPLFEEMHADLFRADYWRALQTRIKEGHVEDVYAYRRR
                     QRFSVRYETDRRPDKAFAPPSGNVRRA"
     gene            complement(3909..5213)
                     /gene="aceA"
                     /locus_tag="MOX77_003747"
     CDS             complement(3909..5213)
                     /gene="aceA"
                     /locus_tag="MOX77_003747"
                     /EC_number="4.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase"
                     /protein_id="HCA3359161.1"
                     /translation="MKTRTQQIEELQKEWTQPRWEGITRPYSAEEVVKLRGSVNPECT
                     LAQLGAAKMWRLLHGEAKKGYINSLGALTGGQALQQAKAGIEAIYLSGWQVVADANLA
                     SSMYPDQSLYPANSVPAVVDRINNTFRRADQIQWASGIEPNDPRYVDYFLPIVADAEA
                     GFGGVLNAFELMKSMIEAGAAAVHFEDQLASVKKCGHMGGKVLVPTQEAIQKLVAARL
                     AADVMGVPTLVIARTDADAADLITSDCDPYDSGFITGERTSEGFYRTHAGIEQAISRG
                     LAYAPYADLVWCETSTPDLELARRFADAIHAKYPGKLLAYNCSPSFNWQKNLDDKTIA
                     SFQQQLSDMGYKYQFITLAGIHSMWFNMFDLAHAYAQGEGMKHYVEKVQQPEFAAAKD
                     GYTFVSHQQEVGTGYFDKVTTIIQGGASSVTALTGSTEESQF"
     gene            complement(5245..6846)
                     /gene="aceB"
                     /locus_tag="MOX77_003748"
     CDS             complement(5245..6846)
                     /gene="aceB"
                     /locus_tag="MOX77_003748"
                     /EC_number="2.3.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate synthase A"
                     /protein_id="HCA3359162.1"
                     /translation="MNPQATTTDELTFTRPQGELEKQVLTAEAVEFLTELVTRFTPKR
                     NKLLAARIQQQQDIDNGKLPDFISETTSIRESNWQIRGIPADLQDRRVEITGPVERKM
                     VINALNANVKVFMADFEDSLAPDWNKVIDGQINLRDAVNGTISYTNEAGKIYQLKPDP
                     AVLICRVRGLHLPEKHVTWRGEAIPGSLFDFALYFFHNYKALLAKGSGPYFYLPKTQA
                     WQEAAWWSEVFSYAEDRFNLPRGTIKATLLIETLPAVFQMDEILHALRDHIVGLNCGR
                     WDYIFSYIKTLKNHPDRVLPDRQVVTMDKPFLSAYSRLLIKTCHKRGAFAMGGMAAFI
                     PSKDVERNNQVLAKVKADKALEANNGHDGTWIAHPGLADTAMAVFNEVLGEYKNQLFI
                     TRDEDAPITAEQLLEPCEGERTEAGMRANIRVAVQYIEAWIPGNGCVPIYGLMEDAAT
                     AEISRTSIWQWIHHEKTLSNGKPVTKALFREMLAEEMRVIQDELGEHRYSSGRFDDAA
                     RLMEQITTSDDLIDFLTLPGYRLLA"
     gene            complement(7115..8044)
                     /gene="metA"
                     /locus_tag="MOX77_003749"
     CDS             complement(7115..8044)
                     /gene="metA"
                     /locus_tag="MOX77_003749"
                     /EC_number="2.3.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-succinyltransferase"
                     /protein_id="HCA3359163.1"
                     /translation="MPIRVLDELPAVNFLREENVFVMTTSRASGQEIRPLKVLILNLM
                     PKKIETENQFLRLLSNSPLQVDIQLLRIDARESRNTPAEHLNNFYCNFDDICDQNFDG
                     LIVTGAPLGLVEFNDVAYWPQIRQVLEWAKDHVTSTLFVCWAVQAALNILYGIPKQTR
                     TDKLSGVYEHHILHPHALLTRGFDDSFLAPHSRYADFPAALIRDYTDLEILAETEEGD
                     AYLFASKDKRIAFVTGHPEYDAHTLAGEYFRDVEAGLNPEIPYNYFPKNDPQSIPRTT
                     WRSHGNLLFTNWLNYYVYQITPYDLRHMNPTLD"
     gene            8201..8638
                     /locus_tag="MOX77_003750"
     CDS             8201..8638
                     /locus_tag="MOX77_003750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
                     /protein_id="HCA3359164.1"
                     /translation="MMINIRRSRREEGEKLIAIWRRSVDATHDFLSNAYRAELEELVS
                     DFLPEAPLWVAVTDQDEPVGFMLLTGEHMDALFIDPDVRGQGIGKMLVEHALTLAPGL
                     TTNVNEQNTQAVGFYKKMGFKVTGRSEVDDLGKPYPLLNLIYP"
BASE COUNT         2108 a         2412 c         2320 g         2087 t
ORIGIN      
        1 tcgtactcgc cgaaagcgtt cggcaggccg gcgttcgggt gcgcggtgac gtagcattcg
       61 gcaatccgcg acagttcctg gacgtactgg cgcagttcat ctggccccag cgcgcagtta
      121 aggccaaaag tgagcgcctc ggcgtggcgc agcgagttat aaaaggcttc ggtcgtctgg
      181 ccggaaagcg tacggccaga ggcgtcggtg atggtgccgg aaatcatgat cggcagatca
      241 acgcccagcg cttcaaactc ttctttcacc gcaaacaccg ccgctttggc gttgagggtg
      301 tcgaagacag tttcaatcag gatcaggtcc gccccgcctt ccaccagcgc tttggtggat
      361 tcacggtagg ccgccaccag ctgatcgaag gtgatattac gaaacgccgg gtcgttgacg
      421 tccggcgaaa tggaggccgt gcggttagtt ggaccaagca cgcccgcaac aaagcgtggt
      481 ttttctggtg ttcgcgccgt ccattcatcg gcgcaggcgc gcgccagttt ggccgccgca
      541 tagttaattt ccgccgacag ggattccatc cggtaatccg ccatcgcaat ggttgtcgag
      601 ttaaaggtgt tggtttcgat gatatccgcg ccagcctcaa agtaggcgtt gtggatagcg
      661 gcgatcacct ccggcttgct gaggaccagc aggtcattgt tgcctttcag gtcgcagggc
      721 cagtcggcaa agcgctcccc gcggaaatct tcttcatgta gacgatagct ctggatcatg
      781 gtgcccatac cgccgtccag caccagaata cgttcattta actgcgcacg cagttgttca
      841 actttgctgc tcacactcgc tcccgacaac gctccacgta acgagccata ctggcacaaa
      901 gcgtgctggc ggaaaagaga acaacgggca acatgagaca tgttcagctt gccacccact
      961 tctgtcgctt tgccggatgg cggcgcaagc gccttatcag tctacaaatt actttggcgg
     1021 ctcccaaagc gtaggcctga taagcgcagc gccatcgggc atcctgtgat gtcactcatc
     1081 cgatcagttc aggaactctt gcattataat tgaataaaac gaaaatgatt tccacgatac
     1141 agaaaaagga gtctgccatg gttgcccctg ttcccgcaaa acgcgggaga aaacctgccg
     1201 ctaccactgc acccgtaacc gggcaggttc agtctttaac tcgcggtctg aagctgctgg
     1261 agtggattgc cgagtccaac ggcagcgtcg cgctgaccga actggcgcaa caggcgggtt
     1321 tgcctaattc cacgactcac cgtctactca ccaccatgca gcaacagggt tttgtccgcc
     1381 aggttggtga gctgggccac tgggccgtag gcgcacacgc gtttatcgtc ggtagcagct
     1441 tcttacagag ccgtaatctg ctggcgattg tccatccgat tttgcgcaag ctgatggagg
     1501 actccggcga aacggtaaac cttgccgtac tcgaccagag cgaccatcag gctattatta
     1561 tcgaccaggt gcagtgcaca caattgatgc gcatgtccgc ccctattggc ggcaagctgc
     1621 ccatgcacgc ctctggcgcg ggcaaggcgt ttttatcaca gctcagtgag gaacaggtta
     1681 ccagtctgct gcaccgcaag gggttgcacg cttataccca tgcgacgctg gtgtcgccgc
     1741 tgcatctgaa agatgacctc gcccaaacac gcaagcgcgg ctattccttt gacgacgaag
     1801 aacatgcgct cggtctgcgc tgcgtggcct cgtgtattta tgacgaacac cgcgaaccgt
     1861 ttgcggccct ctctatttcc ggcccctgct cacgcattac cgacgatcgc gtcaccgaac
     1921 ttggcgccat ggtgattaaa gcggcgaaag aggtgacgct ggcctatggt gggtttagat
     1981 aagcaagggt tggaactgat ttgtaggcct gataagcgca gcgccatcag gcacggcgta
     2041 cattgccgga tggcggcgca aaggccttat ccggcctacg gtcggtttca taacgcacgc
     2101 taaagcgctg gcggcgacga taggcataca catcttctac atgcccttct ttaatacgcg
     2161 tctgtagcgc gcgccagtaa tcggcgcgaa acaggtcggc atgcatctct tcaaacaatg
     2221 gcccgatacg cggatcggca cacagccagt ggcgaaactc ctccgggaaa acatcacccg
     2281 gcgagacgct ataccagggt tcgctggcca gttcgtcttc cggataacgc gctggcggaa
     2341 tatcgcggaa attcacttcc gtcatgtagc aaatttcatc gtagtcgtag aacaccacgc
     2401 gaccatgacg ggtaacgcca aagtttttaa acaacatatc gccggggaaa atattagcgg
     2461 cggcaagctg gcgaatcgca ttaccatatt cttctatcgc atcgcgcaac tgctggcctt
     2521 ctacctgttc cagccagata ttgagcggca ccatgcgacg ttcaatatag agatggcgaa
     2581 tgacgatatg ttccccaaga tcggtaatct tctctggcgc ttcttgtcgt aacagcgcca
     2641 tcagcgccgg atcgatttgc cgtttatcca gtacgaaatt ctcaaactcc tgggtatccg
     2701 ccatacgacc gacgcgatca tgctctttta ccagttgata acaggcacgc acatgggcgg
     2761 cagacatctc tttctgcggg gcgaatttgt ctttaatgat tttaaatacc cggtcgaagc
     2821 ctggcagggt aaataccagc atcaccatgc cgcggattcc aggcgcctca atgaatttct
     2881 catcgctttc agccagataa cataaatatt cgcggtagct ttcggttttc gcatgtttct
     2941 ggcagccaat cgccatatac agttcggcag tggttttacc cggcaggatt tcacgcaacc
     3001 actcaaccag cgcggcaggc agcggcgcat acaccataaa ataagagcgg gcaaaaccaa
     3061 acacaatgct cgcttctgcc gtggtggtca ggcaggtatc gacaaacagt tccccctcat
     3121 cagtgcgatg aatcggcaat aaaaacggca gcgtaccgtc aggtgtggtt aatttaccta
     3181 ccagccaggc cgctttatta cggtaaaaca actcgttcgc cacctggaca tggcagcgag
     3241 gtagcgcgtc ctcgcccagt gtttcagtca ggtgcgcgat aatatagcgg atatcccggc
     3301 ttttattctg ccagggtaga cacagcggta agtcactgag tatgcgcatc aacagcggct
     3361 cccaaccgtg atcgggaaag aagtctttgg ccagcgggcg cgggatagta cggaagcgac
     3421 gctccggttg cgaactgaaa ataaacaacc gctcgggtgt taacgagcgg tggtcaaata
     3481 accggcaata aacggagttg aaaaagctct ccgcaatctc gaagcgcggg taatccggca
     3541 acagccgggt gtaatgctct ttaacgcgta aaaggaaatc cgcgtcggta cttttgccat
     3601 cggtaataca gcgcagttgc tccaccacca gacccacatg atgatcatag aggtggatac
     3661 ggcttttcat cgcctgctgg acggcgtgcc agtcggcctg ttcaaaacgc tgctgcgcgc
     3721 cggaagtcac ttccagaaat cgaccatact gcgcgtcaaa gccttgcagg atggtttgag
     3781 caatcagtaa ttccaggcca cgcggcattt tttccctcat ccggcaccac atcatgccgg
     3841 atggcgcgtt cgcttatccg gcctacgcta tctgtaggcc cggtaagcgc agcgccaccg
     3901 ggcatcaatc aaaactgcga ttcttcggtg gaacccgtta acgcggtaac ggatgacgcg
     3961 ccgccctgaa taatggtggt gactttgtcg aagtaaccag tacccacttc ctgctggtgg
     4021 gaaacaaagg tgtaaccgtc tttcgctgcg gcgaactcgg gttgttgaac cttctcaaca
     4081 tagtgtttca tgccctcacc ctgagcgtat gcatgcgcca ggtcgaacat gttgaaccac
     4141 atgctgtgga tgcccgccag ggtaataaac tggtatttgt aacccatgtc cgacaactgc
     4201 tgctggaagc tggcaatggt cttgtcgtcc agattcttct gccagttgaa ggatggcgaa
     4261 cagttatagg ccagcagttt gcccggatac ttcgcgtgga tagcatcggc aaaacgacgc
     4321 gccagttcga gatccggcgt agaagtttcg caccatacca gatcggcata cggggcatac
     4381 gccagaccgc ggctgatcgc ctgctcaatg cccgcatggg tgcggtaaaa accttcgctg
     4441 gtgcgttcgc cggtaataaa accgctgtca tagggatcgc agtcggaggt gatcagatct
     4501 gccgcatccg catcggtacg cgcaatcacc agcgtcggga cgcccatcac atcagcggcc
     4561 agacgcgcag caaccagttt ctgaatcgcc tcctgcgtgg ggaccagcac cttgccgccc
     4621 atatggccgc atttcttcac cgacgccagc tgatcttcga agtgaacggc cgctgcaccg
     4681 gcttcaatca tcgatttcat cagttcgaag gcattcagaa cgccgccaaa accggcttcc
     4741 gcatcagcaa cgatcggcag gaagtaatcc acatagcgcg gatcgttggg ttcaataccg
     4801 gatgcccact ggatctgatc tgcacgacgg aaagtgttgt tgatccgatc cactaccgcc
     4861 ggaacagagt ttgccgggta caacgattga tccggataca tgctggatgc caggttggca
     4921 tctgccacca cctgccagcc tgaaagataa atcgcctcaa taccggcttt cgcctgctgc
     4981 agcgcctgac cgccagtcag cgcgcccagg ctgttgatat agcctttttt cgcttcaccg
     5041 tgcaacagcc gccacatttt cgcggcgccg agctgcgcca gcgtgcattc cgggttaacc
     5101 gagccgcgta atttcaccac ctcctccgcg ctgtacgggc gggtgatgcc ttcccagcgc
     5161 ggttgtgtcc actctttctg taattcttcg atttgttgag tacgggtttt catgtgcaga
     5221 tgctccatat tgttatgtgg tgaattaagc cagtaagcga tagcccggca gggtgaggaa
     5281 gtcgattaag tcatctgatg tggtgatttg ctccatcaga cgtgcggcat cgtcgaagcg
     5341 cccgctgctg tagcggtgct cgcccagttc gtcctggatt acccgcatct cttccgccaa
     5401 catttcgcgg aaaagcgctt tcgttacggg ttttccattg ctcagtgttt tctcatggtg
     5461 aatccactgc cagatagagg ttcgtgagat ttccgccgtc gcggcatcct ccatcagacc
     5521 gtaaatcggt acacagccat tgccggggat ccacgcttca atgtactgca ctgccacgcg
     5581 aatattggcg cgcattcccg cttctgtgcg ttcgccttca catggctcca gtaactgctc
     5641 agcggtaatc ggcgcatctt catcacgggt aatgaacagc tgatttttgt actcgcccag
     5701 tacctcgtta aagacggcca ttgccgtatc cgccaacccg ggatgcgcaa tccacgtgcc
     5761 gtcgtggccg ttgttcgctt ccagcgcttt atccgctttc actttggcaa ggacctgatt
     5821 attgcgttca acgtctttgc tcgggataaa cgccgccata ccgcccatcg cgaacgcgcc
     5881 gcgcttgtga caggttttga tcagcaggcg cgagtaggca ctcagaaacg gtttgtccat
     5941 cgttaccacc tgcctgtccg gcaggacgcg atccgggtga tttttcaacg ttttgatata
     6001 gctgaaaata taatcccagc gaccacagtt gagaccgacg atatgatcac gcaacgcatg
     6061 aagaatctca tccatctgga aaacagcagg cagcgtttca atcaacaggg tcgctttgat
     6121 cgtaccgcgc ggtagattga agcggtcttc ggcgtagctg aaaacttcac tccaccaggc
     6181 tgcctcctgc caggcttgcg ttttcggcag gtaaaaatac gggccgctac ctttagcgag
     6241 cagcgctttg tagttgtgga aaaagtacag agcaaaatca aacaggctgc cgggaatggc
     6301 ttccccccgc caggtaacat gtttttctgg cagatgtaga ccgcgtacac gacaaatcaa
     6361 tacggccgga tcgggcttga gctgatagat ttttccggct tcgttggtat agctaatggt
     6421 gccgttcacc gcatcacgca ggttgatttg accatcaata actttattcc agtccggcgc
     6481 cagcgagtct tcaaaatccg ccataaacac tttcacattt gcgttcaggg cattaatcac
     6541 cattttacgt tcaaccggcc cggtaatttc tactcggcga tcctgtaaat ccgccggaat
     6601 accacgaatc tgccaattac tttctctaat ggaagtggtt tccgaaataa aatcaggcaa
     6661 cttaccgtta tcaatatcct gctgttgctg gatacgtgca gccaggagtt tattgcgttt
     6721 tggcgtaaaa cgggtgacta actccgtcaa aaactcgact gcctcagcgg tcaggacttg
     6781 cttttccagc tcgccttgcg gcctggtaaa ggttaattca tcagttgtgg ttgcctgtgg
     6841 attcatcatg cagctcctcg ttgttgatcc agatacatcc ccaatgcgaa cgaaggatca
     6901 ctgtgcgctt ttcgttcaac acaactaaga ctactcaatt aaatttcaaa atcaaaaaca
     6961 atttccattt ttaatttaat tacacattaa cctattgata acaatataaa ttaaatttaa
     7021 ttacatgatg aggtgcgttt cggaaataaa aaaggcaccc gaaggtgcct gattcaacat
     7081 gctgaaacgc tttaggattg tcagaagcag aagattaatc cagggttgga ttcatgtgac
     7141 gcagatcata tggcgtaatc tggtagacat aatagttgag ccagttagta aacagtaaat
     7201 tgccgtggct gcgccaggtt gtgcgcggta tgctttgcgg atcgtttttc gggaaatagt
     7261 tgtacggaat ctccggattt aacccggcct caacgtcacg aaaatattcc cccgctaacg
     7321 tatgagcgtc atattcagga tgaccggtga caaacgcaat acgtttatct ttgctggcaa
     7381 acaggtacgc atccccttct tctgtttcgg ccagaatttc aagatccgta taatcccgta
     7441 ttagcgccgc cgggaaatcg gcatagcgtg agtgtggcgc aagaaacgaa tcatcaaaac
     7501 cacgcgttaa cagagcatgt ggatgaagaa tgtgatgttc atagacgccg gaaagtttat
     7561 ctgtacgggt ctgcttaggg ataccataaa gaatattgag tgcggcctga acggcccaac
     7621 agacaaatag cgtcgaagta acgtgatctt tcgcccattc cagcacctgc ctaatctgcg
     7681 gccagtaagc cacgtcatta aactccacca gacccagcgg cgctccggtc acgataagcc
     7741 catcaaagtt ctgatcgcag atatcgtcga agttacagta aaagttgttc agatgctcgg
     7801 ctggcgtgtt cctcgactcg cgggcatcta tccgcagtag ttgaatatcg acctgcaatg
     7861 gcgagttcga tagcaaacgc agaaactgat tttccgtttc aatcttcttc ggcatcaggt
     7921 taaggataag tacctttagc gggcgaattt cctgacctga tgcgcgagaa gtcgtcatga
     7981 cgaagacatt ctcctcacgt aaaaaattga cggcgggtag ctcgtccagc acgcgaatcg
     8041 gcataacctg ataacctcac gatatacgtt taaacgttta gacatccaga tagctgaaga
     8101 tactcagaaa tcaggcgaat gtcgagtctg caagttcaag gtgagaaagt ttcacgacag
     8161 catttgcatt agaatagaag taagcaaaaa aggagtgaag atgatgatta acattcgtcg
     8221 ttcaaggcgt gaggaagggg aaaaactgat tgcgatctgg cgtcgctcag tcgatgccac
     8281 gcacgatttt ctgtcaaacg cttatcgggc cgaactggaa gaactggtga gcgattttct
     8341 gccagaagcg ccactatggg ttgccgtgac cgatcaggat gagccggtag ggtttatgct
     8401 gcttaccggt gagcatatgg atgctctgtt tatcgatccg gacgtgcgtg gtcagggtat
     8461 cggtaagatg ctggttgaac atgcgttaac actggcgccg ggattgacaa ccaatgttaa
     8521 cgagcaaaat acacaagctg ttggatttta taagaaaatg ggattcaagg tgacgggacg
     8581 ttcggaggtc gacgatcttg ggaaaccgta tccattgttg aatttaattt atccgtgagt
     8641 agtggcgctg cctgataagt gcatgcaggc cggataaggc gaagccgcca tccggcggtg
     8701 caggttgcct gatggcgctg cgcttatcag gcctacattt ttatcagtta ccacacacgc
     8761 aaaaaagccc gtccgtcagg atgggcttct tcacttgtct gatgcctggc agtttatggc
     8821 gggcgtgctg cccgccaccc tacgggccgt tactgcgcaa cgttcaaatc cgctcccggc
     8881 ggatttgtcc tcctcaggag agtgctcacc ggcagaccac agataaa
//
LOCUS       DAGWFR010000163         8884 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.165, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000163 DAGWFR010000000
VERSION     DAGWFR010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 8884)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8884)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8884
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.165"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..167
                     /locus_tag="MOX77_003751"
     CDS             <1..167
                     /locus_tag="MOX77_003751"
                     /EC_number="4.1.1.48"
                     /EC_number="5.3.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460684.1"
                     /note="monomeric bifunctional protein; functions in
                     tryptophan biosynthesis pathway;
                     phosphoribosylanthranilate is rearranged to
                     carboxyphenylaminodeoxyribulosephosphate which is then
                     closed to form indole-3-glycerol phosphate; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="bifunctional indole-3-glycerol phosphate
                     synthase/phosphoribosylanthranilate isomerase"
                     /protein_id="HCA3359165.1"
                     /translation="LDDVLLAGGLAADNCVQAAQVGCAGLDFNSGVESQPGIKDARLL
                     ASVFQTLRAY"
     gene            177..1370
                     /gene="trpB"
                     /locus_tag="MOX77_003752"
     CDS             177..1370
                     /gene="trpB"
                     /locus_tag="MOX77_003752"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HCA3359166.1"
                     /translation="MTTLLNPYFGEFGGMYVPQILMPALNQLEEAFVSAQKDPEFQAQ
                     FADLLKNYAGRPTALTKCQNITAGTRTTLYLKREDLLHGGAHKTNQVLGQALLAKRMG
                     KSEIIAETGAGQHGVASALASALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVH
                     SGSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVREFQRMIGEETKAQILD
                     KEGRLPDAVIACVGGGSNAIGMFADFINDTSVGLIGVEPGGHGIETGEHGAPLKHGRV
                     GIYFGMKAPMMQTADGQIEESYSISAGLDFPSVGPQHAYLNSIGRADYVSITDDEALE
                     AFKTLCRHEGIIPALESSHALAHALKMMREQPEKEQLLVVNLSGRGDKDIFTVHDILK
                     ARGEI"
     gene            1370..2176
                     /gene="trpA"
                     /locus_tag="MOX77_003753"
     CDS             1370..2176
                     /gene="trpA"
                     /locus_tag="MOX77_003753"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HCA3359167.1"
                     /translation="MERYENLFAQLNDRREGAFVPFVTLGDPGIEQSLKIIDTLIDAG
                     ADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLALIREKHPTIPIGLLMY
                     ANLVFNNGIDAFYARCEQVGVDSVLVADVPVEESAPFRQAALRHNIAPIFICPPNADD
                     DLLRQVASYGRGYTYLLSRSGVTGAENRGALPLHHLIEKLKEYHAAPALQGFGISSPE
                     QVSAAVRAGAAGAISGSAIVKIIEKNLASPEQMLAELRSFVSAMKAASRA"
     gene            2656..2838
                     /locus_tag="MOX77_003754"
     CDS             2656..2838
                     /locus_tag="MOX77_003754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="general stress protein"
                     /protein_id="HCA3359168.1"
                     /translation="MAEHRGGSGNFAENREKASEAGRKGGQHSGGNFKNDPQRASEAG
                     KKGGQNSHGGRKSDNS"
     gene            2928..3431
                     /locus_tag="MOX77_003755"
     CDS             2928..3431
                     /locus_tag="MOX77_003755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HCA3359169.1"
                     /translation="MNIKTVEDLFIHLLSDTYSAEKQLTKALPKLARATSNEKLSQAF
                     QSHLEETQGQIERIDQIVESESGIKLKRMKCVAMEGLIEEANEVIESTEKNEVRDAAL
                     IAAAQKVEHYEIASYGTLATLAEQLGYSKALKLLKETLDEEKQTDLKLTDLAVSNVNK
                     SAERKSK"
     gene            3505..4011
                     /locus_tag="MOX77_003756"
     CDS             3505..4011
                     /locus_tag="MOX77_003756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HCA3359170.1"
                     /translation="MNYTEHYHDWLRDAHAMEKQAESMLESMASRIENYPDIKARIEQ
                     HISETKHQITMLEEVLDRNGISRSVLKDSMSKMAAMGQSIGGMFPSDEIVKGSISGYV
                     FEQFEIACYTSLLAAAKKAGDTASIPTIEAILKEEMQMADWLIKHIPQTTEQFLLRSE
                     ADGVEAKK"
     gene            4031..4909
                     /locus_tag="MOX77_003757"
     CDS             4031..4909
                     /locus_tag="MOX77_003757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese catalase family protein"
                     /protein_id="HCA3359171.1"
                     /translation="MFRHVKQLQYTVRVSEPNPGLANLLLEQFGGPQGELAAACRYFT
                     QGLSDDDAGRREMLMDIATEELSHLEIIGSLVGMLNKGAKGELAEGTESEAELYRSLT
                     QNGNDSHITSLLYGGGPALTNSGGVPWTAAYIDTIGEVTADLRSNIAAEARAKIIYER
                     LINLTDDPGVKDTLSFLMTREVAHQLSFEKALYSIRNNFPPGKLPPVEQYTDVYYNIS
                     QGDDPRGSWNSDENFNYVAEPMPAVDGGDGLATVKLPREQMALLKAMAERTKSDPTVD
                     PLTGAELGCGEPKEDK"
     gene            complement(4991..5629)
                     /gene="ompW"
                     /locus_tag="MOX77_003758"
     CDS             complement(4991..5629)
                     /gene="ompW"
                     /locus_tag="MOX77_003758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein OmpW"
                     /protein_id="HCA3359172.1"
                     /translation="MKKFTVAALALTTLLSGSAFAHEAGEFFMRAGPATVRPTEGAGG
                     TLGHLNGFDVSNNTQLGLTFTYMATDNIGVELLAATPFRHKVGTGATGDIATVHLLPP
                     TLMAQWYFGDSSSKVRPYVGVGVNYTTFFDNDFNDNGKKTGLSDLSFKDSWGAAGQVG
                     VDYLINRDWLIGASVWYMDIDTTANYKMGGVQQHDSVRLDPWVFMFSAGYRF"
     gene            5967..6371
                     /locus_tag="MOX77_003759"
     CDS             5967..6371
                     /locus_tag="MOX77_003759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HCA3359173.1"
                     /translation="MSVLNPCMTCGACCAYFRVSFYWAEGDDASGRVPASLTEPVTPF
                     LRCMAGTNQKQPHCKALIGTPGENVSCAIYENRPSTCREFSISGEGGEVNEACNRARA
                     RYGLPPLYKDMLFHTTADAATVELSRVQLPAN"
     gene            6397..7140
                     /locus_tag="MOX77_003760"
     CDS             6397..7140
                     /locus_tag="MOX77_003760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0259 family protein"
                     /protein_id="HCA3359174.1"
                     /translation="MSITAKSVYRDAGNFFRNQFITILLVSLLCAFITVVLGHAFSPS
                     DAQIAQLSEGEHLAGSAGLFELVQNMTPEQQQILLRASAASTFSGLIGNAILAGGIIL
                     MIQLVSAGHRVSALRAIGASAPALPKLFILIFLTTLLVQIGIMLIVVPGIIMAIVLAL
                     APVMLVEEKMGVFAAMRSSMRLAWANMKLVAPAVIGWLLAKTLLLLFAPSFAVLTPNV
                     GAVLANTLSNLISAVLLIYLFRLYMLIRQ"
     gene            7197..7736
                     /locus_tag="MOX77_003761"
     CDS             7197..7736
                     /locus_tag="MOX77_003761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation protein A"
                     /protein_id="HCA3359175.1"
                     /translation="MKQFLDFLPLVVFFAFYKLYDIYAATSALIVATAIVLIYSWVRY
                     RKIEKMALITFVLVAVFGGLTLFFHNDEFIKWKVTVIYALFAGALLISQWVMKKPLIQ
                     RMLGKELALPQQVWSKLNLAWALFFIACGLANIYIAFWLPQNIWVNFKVFGLTALTLI
                     FTLLSGVYIYRHLPQEDKS"
     gene            7897..8298
                     /gene="yciA"
                     /locus_tag="MOX77_003762"
     CDS             7897..8298
                     /gene="yciA"
                     /locus_tag="MOX77_003762"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioester hydrolase YciA"
                     /protein_id="HCA3359176.1"
                     /translation="MTTMDNTPQGELVLRTLAMPADTNANGDIFGGWLMSQMDIGGAI
                     LAKEIAHGRVVTVRVEGMTFLRPVAVGDVVCCYARCVKRGTTSISINIEVWVKKVASE
                     PIGQRYKATEALFIYVAVDPDGKPRPLPVQG"
     gene            complement(8357..>8884)
                     /locus_tag="MOX77_003763"
     CDS             complement(8357..>8884)
                     /locus_tag="MOX77_003763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HCA3359177.1"
                     /translation="VVEPEPEPEPIPEPPKEAPVVIEKPKPKPKPKPKPKPEPVKKVE
                     EQPKREVKPAAPRPASPFENSAPMRPTSGTASATSKPAVSVPTGPRALSRNQPQYPAR
                     AQALRIEGRVKVKFDVTAAGRVENVQILSAQPANMFEREVKNAMRKWRYEAGKPGSGL
                     VVNIIFRLNGAAQIE"
BASE COUNT         2173 a         2247 c         2253 g         2211 t
ORIGIN      
        1 cgctggatga tgtgttactg gcgggcgggc tggcggccga taactgcgtc caggcggcgc
       61 aagtcggctg tgccggtctc gattttaatt caggtgtgga gtcacagccg ggcatcaaag
      121 atgctcgtct tctggcctcg gtttttcaga cactgcgcgc atattaagga aaaaacatga
      181 caacacttct caacccctac tttggtgaat tcggcggcat gtatgtgccg cagatcctga
      241 tgcctgcgct gaaccagctt gaagaggcct tcgtcagcgc gcaaaaagat cctgaatttc
      301 aggcgcaatt cgccgatctg ctaaaaaact acgcgggacg ccccaccgcg ctgacgaaat
      361 gccagaacat taccgccggt acgcgtacca cgttgtattt aaagcgcgaa gatttactgc
      421 acggcggcgc acacaaaacc aatcaggtac tgggtcaggc gctgctggcc aaacggatgg
      481 gtaaaagcga gattatcgct gaaaccggcg ccggtcagca cggcgtcgcc tctgcgctcg
      541 ccagcgccct gctgggtctg aaatgccgta tctatatggg tgccaaagac gttgagcgcc
      601 agtcgccgaa cgtcttccgt atgcgtctga tgggcgctga ggtcatcccg gttcatagcg
      661 gctccgctac gctaaaagat gcctgtaacg aggcgctgcg cgactggtcc ggtagttacg
      721 aaaccgcgca ctatatgctc ggcacggcgg caggaccgca tccctatcct accatcgttc
      781 gcgagttcca acgcatgatt ggcgaagaga cgaaagcgca aatcctcgac aaagagggcc
      841 gtctgccaga tgccgttatc gcttgcgtcg gtggcggctc aaacgctatc gggatgtttg
      901 cggattttat taatgatacc agcgtcgggc taataggcgt tgaacctggc ggtcacggta
      961 ttgaaaccgg cgagcatggt gcgccgctta aacatggtcg cgttggcatc tatttcggga
     1021 tgaaagcgcc gatgatgcaa acagcagacg ggcaaattga agagtcctat tccatttccg
     1081 ccggactcga tttcccgtcc gttgggccgc aacatgcgta cctgaacagc atcggacgcg
     1141 cggattatgt ctccattacc gatgatgagg cgctggaagc cttcaaaacg ttgtgccgcc
     1201 atgagggaat tatcccggcg ctggagtcct cccacgcgtt ggcgcacgct ctgaaaatga
     1261 tgcgcgagca gccggaaaaa gagcaactgc tggtggtcaa tctctctggc cgcggagata
     1321 aagacatctt taccgtacac gatatcctga aagcgcgagg ggaaatctga tggaacgcta
     1381 cgaaaattta tttgcccaac tcaacgatcg ccgggaaggc gcttttgtcc ccttcgtgac
     1441 cctgggcgac cctggcattg aacagtcact gaaaattatt gacacactga ttgacgctgg
     1501 cgccgacgct ctggagctgg gggttccctt ctccgatcct ctggccgatg gccctaccat
     1561 ccagaatgcg aacttacgcg ccttcgccgc tggcgtcacg ccagctcagt gttttgaaat
     1621 gctggcgctg attcgtgaaa aacacccgac cattccgatt ggcctgctaa tgtacgcgaa
     1681 tctggtgttc aataacggca tagatgcgtt ctatgcccgt tgtgaacagg ttggcgtaga
     1741 ttccgtgctg gtcgcagatg tcccggttga agaatcggcc cccttccgcc aggcggcgtt
     1801 acggcataat atcgcgccga tcttcatctg cccgccaaat gcggatgacg atcttctgcg
     1861 ccaggtcgca tcttacggcc gcggttatac ctacctgctt tcgcgttcgg gcgtcaccgg
     1921 cgcggaaaac cgtggcgcat tgccgttgca tcatctcatt gagaagctta aagagtacca
     1981 cgccgcgcct gcgttacagg gcttcggtat ctcctcgccg gaacaggtgt ctgcggccgt
     2041 gcgtgccggg gcggctggcg ctatctccgg ctcagccatt gtcaagatta tcgagaaaaa
     2101 cctcgcgtct cccgaacaga tgttggcgga gctcaggtcc tttgtctcag cgatgaaagc
     2161 cgccagccgc gcataacggg ttaagccgtc agcataacgc tggcggctta atgagaggtt
     2221 ggcgccaaac cagaatcacg attcaggcgt acatcatcaa tctttttggt gttattcccc
     2281 gtccagcttt caaaaagtct gaagtcaatt tttgctaaga aaactcctaa tcacgccgaa
     2341 aaatttagcg ttttcacgtc aatttccccc gcctttatgt aaagaaatgt caacaaacaa
     2401 tgcattaacg tttccagggc cgcagatagt gactcttgtt attaataaca atgcaaagca
     2461 ttttctgtta aatcgcttat tctaaaagaa aatatagaat atattatctc taaaccattt
     2521 tttgtgcatt atttacgcgg taaatcacaa ctatttccgt caatttgact aatcggttta
     2581 accaactaat tttaataggg tgtcgacacg gttaaaaccg attttttcag caagcaacga
     2641 gacaggagaa ataatatggc cgaacatcgt ggtggttcag gaaatttcgc cgagaatcgt
     2701 gaaaaagcat ctgaagcggg ccgcaaaggc ggtcagcata gcggcgggaa tttcaaaaac
     2761 gatccgcaac gagcttctga agccggtaaa aaaggtggtc agaatagtca cggcggacgt
     2821 aaatccgata attcctgatt tactgtaatg taaatataac acatgctttt atcaagcaat
     2881 ctgcgagtct tctggctcgc agtattttgc ccaggagaat tagatttatg aatatcaaaa
     2941 ccgttgaaga cctttttatc catctacttt cagataccta tagtgcagaa aaacaattaa
     3001 ccaaggctct tcctaaactt gccagagcca cgtccaatga aaaattaagc caggcctttc
     3061 aatctcatct tgaagaaacc cagggtcaga ttgaacgtat tgatcagatc gtcgaatctg
     3121 aatctggcat taaactgaaa agaatgaaat gcgtcgctat ggaagggctg attgaagaag
     3181 ccaatgaagt catcgaaagt acggagaaaa acgaagtacg cgatgcagcg cttatcgccg
     3241 cggcgcaaaa agtcgagcat tacgaaatcg ccagctacgg cacgctagcc accctggccg
     3301 agcagctcgg ctatagcaaa gcattaaaac tgctcaaaga aaccctcgac gaggaaaaac
     3361 aaactgattt aaaacttacc gatttagcag tcagcaatgt taataaaagt gctgaacgca
     3421 aatcgaaata atatttttaa ttatcagctt gcatgattcc gattttatta tcggagcaga
     3481 ttatcacgca ttgaggaatg taaaatgaat tatactgaac attatcatga ctggcttcgt
     3541 gacgcccatg ccatggaaaa acaggcagaa tcgatgcttg aatctatggc cagccgtatt
     3601 gaaaattatc ctgatataaa agccagaatt gaacaacata ttagtgaaac caaacatcaa
     3661 attaccatgc tcgaggaagt gttggaccgt aatggcattt cccgttcggt gttgaaagac
     3721 tccatgagta aaatggcagc aatggggcaa tctatcggtg gcatgttccc ttccgatgaa
     3781 attgtcaaag gctcaattag cggttatgtt ttcgagcagt tcgaaattgc ttgttatacc
     3841 tccctgctgg cggcggcaaa aaaagctggc gacactgcct caattccaac gattgaagcc
     3901 attctgaaag aagaaatgca aatggctgac tggcttatca aacatattcc gcagacaacg
     3961 gaacaatttt tactgcgatc tgaagcagat ggcgttgaag ccaaaaaata aataataagc
     4021 aggaggcaat atgtttcgac acgtaaaaca acttcaatat actgtgcgag tgagcgaacc
     4081 taatcctgga ttagcgaacc tgctgctgga acagtttggc ggcccgcagg gcgaactggc
     4141 ggccgcctgc cgctacttca cgcaaggttt aagcgatgat gatgccggtc gtagagagat
     4201 gttaatggac atcgccaccg aggagctgag tcatctggaa attatcggct cactggtagg
     4261 aatgcttaat aaaggcgcta aaggcgagct ggcggaaggc accgaaagcg aagcggaact
     4321 ttatcgctcg ctgacgcaga atggtaatga cagccatatc acctctctgc tgtatggcgg
     4381 cggccctgcg ttgacaaact ccggcggcgt accgtggacc gcggcttata ttgatactat
     4441 cggcgaagtc acagccgatc tacgctcaaa catcgcggca gaggcgcgag cgaagattat
     4501 ttatgaacgc ctgattaacc tgaccgacga tcctggcgta aaagacacgc tcagtttctt
     4561 aatgacccgt gaagtcgcgc accagctctc ttttgaaaag gcgctgtatt cgattcgtaa
     4621 caacttcccg ccgggtaaat taccgccggt agaacagtat accgacgtgt actacaacat
     4681 atcgcaaggc gacgatccgc gaggtagctg gaatagcgat gagaacttca actatgtcgc
     4741 agaaccgatg cctgctgttg atggcggcga tggcctggcg acagtgaaat tgccgcgcga
     4801 gcagatggcg ctgctcaaag cgatggcaga aagaacgaaa tcggacccca ccgttgatcc
     4861 tctcactggc gcagaactag gctgcggcga accgaaagaa gacaagtgag ttccgacaag
     4921 taaaatccgt gtgtcatgtc cttttttgac cccgcctggc ggggtctttt ttcgtcacaa
     4981 catcacgcga ttagaaacga tagcctgccg agaacataaa tacccatggg tccagacgca
     5041 cgctgtcatg ctgctgcacg ccgcccattt tataattggc tgtagtatca atatccatgt
     5101 accagacaga ggcgccaatt aaccagtcgc ggttaatcag gtaatctacc ccaacttgcc
     5161 ctgccgcgcc ccaggaatcc ttaaagctca gatcggacag cccggtcttt ttaccattat
     5221 cgttaaagtc gttatcgaag aaggtggtgt agttcacccc cacgccgaca taaggacgca
     5281 ctttgctgct ggaatcgccg aagtaccact gcgccattaa cgttggcggt aacaggtgga
     5341 ccgtggcgat atcacccgtc gcgcccgtac ccaccttatg gcggaacggc gtggccgcca
     5401 gcaattcaac cccgatattg tccgtcgcca tgtaagtgaa tgtcaggccg agttgcgtgt
     5461 tattactcac atcaaacccg tttaaatgcc ccagcgtacc acccgcccct tctgtaggtc
     5521 tgacggttgc cggacctgca cgcataaaga attctccggc ttcgtgcgcg aacgcgctgc
     5581 ctgagagaag agttgttaac gccagtgccg ccactgtaaa ttttttcata cccgctccat
     5641 cgttatggtt ataaaagcgt gatgaatata cccacaatga agtaataagt gatctaacac
     5701 agatcacatt tgttcttata atttaacatt tattgatcca gattaattta gaacttgtat
     5761 tgaaaatcct ggttatagga attcagatca attttgacat attcacgcta tgcaaatatt
     5821 tgtctgctcc tgttgccctg gcgataaagg ctggctaagg taatcaatgt cccgcaatgg
     5881 cgcgtggcgg taagattcgc gaacactgcg ggacagatta atttccgttg taatctattg
     5941 atacgtgagt tttttgcagg tgaatcatga gcgttcttaa cccatgcatg acatgcggtg
     6001 cctgttgtgc ctattttcgt gtctcctttt attgggctga aggcgacgat gccagcggac
     6061 gcgttccggc gtcattaacc gagcctgtta cccctttttt acgttgtatg gccggtacca
     6121 accaaaaaca gccgcactgt aaagcgctaa ttggcacgcc gggtgaaaac gtcagttgcg
     6181 ctatttatga aaaccgccct tcaacctgtc gcgaattttc gatatcgggc gaaggaggcg
     6241 aagtgaatga ggcgtgtaat cgcgcccgcg cgcgatacgg attaccgccg ctttacaaag
     6301 atatgctttt ccatacaact gctgatgctg ccactgtaga gttatccagg gtacaattgc
     6361 ccgcaaatta acacctgcaa aactcaagga gagtgcatgt ctatcacggc gaagtccgtt
     6421 taccgtgacg ccggaaattt tttccgaaat caatttatta ctatcttgct ggtttcgttg
     6481 ctgtgcgcat ttatcacggt ggtcttaggt catgcctttt cacccagcga tgcgcaaatc
     6541 gcgcaactca gtgaaggaga acatctggca ggcagcgctg gcctgtttga gctggtacaa
     6601 aatatgacgc cggagcagca acagatcctg ttgcgcgcct ctgccgcctc gacgttttcc
     6661 gggcttatcg gcaacgctat tctggccggc ggtatcatcc tgatgattca gttagtttca
     6721 gcgggacatc gggttagcgc gctgcgcgct atcggcgcca gcgcccctgc attgcctaaa
     6781 ctgtttattc ttatttttct gactaccctg ttagtgcaaa tcggtataat gctgattgtc
     6841 gttccgggga ttattatggc cattgtgctg gcgcttgcgc cagtgatgtt ggttgaagag
     6901 aaaatgggcg tgtttgccgc aatgcgcagc agtatgcgtt tagcctgggc taacatgaaa
     6961 ctggtcgcgc ctgcggtgat aggctggtta ctggctaaaa cattgctatt gctgttcgcg
     7021 cccagcttcg ctgtactgac cccaaatgta ggcgctgtac tggcgaatac gttgagcaat
     7081 ctgatttccg cagtattgct tatctactta ttccgcctgt atatgttgat tcgccaataa
     7141 tccgcaatgc gccgttacgc ggcgcattcg acgctcgttg atgatggaat cgaagaatga
     7201 agcagtttct ggatttttta ccgctggttg tcttttttgc gttttataaa ctttatgaca
     7261 tctatgcggc gacctccgca ctgattgtcg caacggcaat cgtgctgatt tatagctggg
     7321 tgcgctatcg gaaaatagag aagatggcgc tgattacctt tgttctggtt gccgtcttcg
     7381 gcggtctgac gctcttcttc cataacgatg aatttattaa atggaaggtg acggttattt
     7441 atgcgctgtt cgccggcgcg ctgttaataa gccagtgggt gatgaaaaaa ccgttaatcc
     7501 aacgtatgtt aggtaaagaa ctggcgttgc cgcagcaggt ctggtcaaag ctgaacctgg
     7561 cgtgggcgct gttttttatt gcgtgcggtc tggctaacat ttatatcgcc ttctggttgc
     7621 cgcaaaatat ctgggttaac tttaaggtct tcggactcac ggcgctgacg ctcattttta
     7681 ccctgctgag cggcgtctat atctaccggc atctgccaca ggaagataaa tcataaccct
     7741 cccgtgactt atcatcgcca gactgcgaac gcctggcgat attttctccg cctttacgcc
     7801 ctgcgctttc ccgtcagtac ctttattccc actattctcc acacaatatt catagtagca
     7861 tcgcggctgt aattttttct gatagtcggt tttacaatga caacaatgga taatactcct
     7921 cagggcgagc tggttttacg tacattggcc atgcctgccg ataccaatgc gaacggcgat
     7981 atttttggcg gctggctgat gtcgcaaatg gatattggcg gcgcgatact ggccaaagag
     8041 atcgcgcacg gtcgggttgt aaccgtacgc gtggaaggaa tgacatttct gcgccccgtc
     8101 gcggttggcg atgtcgtatg ctgctacgcg cgctgcgtta aacgcggtac gacgtctatt
     8161 agcatcaata ttgaagtctg ggtgaaaaaa gtcgcgtcag aaccgattgg acagcgctac
     8221 aaggccaccg aggcgctgtt tatttatgtt gccgtcgatc cggacggtaa acctcgcccg
     8281 ctcccggttc agggttaagt atacccgctt acgccgccag caggtgatgg tatattccta
     8341 ctggcggcgc cagagattac tcaatctgcg ccgcaccgtt cagacggaag ataatattga
     8401 ccaccagccc ggaacccggc ttgcctgctt catagcgcca ttttcgcatc gcattcttaa
     8461 cttcacgctc aaacatattg gctggctgcg cggatagaat ctgtacattt tccactcgcc
     8521 cagcagcggt cacgtcaaac ttcaccttta cgcggccttc aatacgtaac gcctgtgctc
     8581 gcgccggata ctgcggctgg ttacggctca gagctcgagg tccagtgggc acgctcaccg
     8641 ccggcttgct ggtcgccgat gcggtgccgc ttgttggccg catcggggcg ctattttcaa
     8701 acggtgaggc aggacgcggt gcggctggtt tgacttcgcg cttcggctgc tcttcaacct
     8761 ttttcaccgg ttccggtttc ggttttggct tgggttttgg cttaggtttg ggtttctcaa
     8821 tcaccacggg cgcttcttta ggcggttcag ggatcggctc tggctccggt tcgggttcaa
     8881 ccac
//
LOCUS       DAGWFR010000164         8775 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.166, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000164 DAGWFR010000000
VERSION     DAGWFR010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 8775)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8775)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8775
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.166"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..1460)
                     /gene="mukB"
                     /locus_tag="MOX77_003764"
     CDS             complement(<1..1460)
                     /gene="mukB"
                     /locus_tag="MOX77_003764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partition protein MukB"
                     /protein_id="HCA3359178.1"
                     /translation="MIERGKFRSLTLINWNGFFARTFDLDELVTTLSGGNGAGKSTTM
                     AAFVTALIPDLTLLHFRNTTEAGATSGSRDKGLHGKLKAGVCYSMLDTINSRHQRVVV
                     GVRLQQVAGRDRKVDIKPFAIQGLPMSVQPTQLVTETLNERQARVLSLAELKDKLDEM
                     EGVQFKQFNSITDYHSLMFDLGIIARRLRSASDRSKFYRLIEASLYGGISSAITRSLR
                     DYLLPENSGVRKAFQDMEAALRENRLTLEAIRVTQSDRDLFKHLISEATDYVAADYMR
                     HANERRVHLDQALAFRRELYTSRKQLAAEQYKHVDMARELGEHNGAEGSLEADYQAAS
                     DHLNLVQTALRQQEKIERYEADLEELQIRFEEQNEVVAEAAEMQDENEARAEAAELEV
                     DELKSQLADYQQALDVQQTRAIQYNQAISALARAKELCHLPDLTPESAAEWLDTFQAK
                     EQEATEKLLSLEQKMSVAQTAHSQFEQAYQLVAAING"
     gene            complement(1460..2164)
                     /gene="mukE"
                     /locus_tag="MOX77_003765"
     CDS             complement(1460..2164)
                     /gene="mukE"
                     /locus_tag="MOX77_003765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partition protein MukE"
                     /protein_id="HCA3359179.1"
                     /translation="MSLTNIEQVMPVKLAQALANPLFPALDSALRSGRHIGLDELDNH
                     AFLMDFQEYLEEFYARYNVELIRAPEGFFYLRPRSTTLIPRSVLSELDMMVGKILCYL
                     YLSPERLANEGIFTQQELYDELLTLADEAKLLKLVNNRSTGSDVDRQKLQEKVRSSLN
                     RLRRLGMVWFMGHDSSKFRITESVFRFGADVRAGDDPREAQRRLIRDGEAMPIENHLQ
                     LNDETEESQPDSGEEE"
     gene            complement(2145..3467)
                     /gene="mukF"
                     /locus_tag="MOX77_003766"
     CDS             complement(2145..3467)
                     /gene="mukF"
                     /locus_tag="MOX77_003766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partition protein MukF"
                     /protein_id="HCA3359180.1"
                     /translation="MSEFSQTVPELVAWARKNDFSISLPVDRLSFLLAVATLNGERLD
                     GEMSEGELVDAFRHVSDAFEQTSETIGVRANNAINDMVRQRLLNRFTSEQAEGNAIYR
                     LTPLGIGITDYYIRQREFSTLRLSMQLSIVAGELKRAADAAAEGGDEFHWHRNVYAPL
                     KYSVAEIFDSIDLTQRIMDEQQQQVKDDIAQLLNKDWRAAISSCELLLSETSGTLREL
                     QDTLEAAGDKLQANLLRIQDATMTHDDLHFVDRLVFDLQSKLDRIISWGQQSIDLWIG
                     YDRHVHKFIRTAIDMDKNRIFAQRLRQSVQTYFDDPWALTYANADRLLDMRDEEMALR
                     DDEVTGELPPDLEYEEFNEIREQLAAIIEEQLAIYKTRQTPLDLGLVVREYLAQYPRA
                     RHFDVARIVIDQAVRLGVAQADFTGLPAKWQPINDYGAKVQAHVIDKY"
     gene            complement(3460..4263)
                     /gene="cmoM"
                     /locus_tag="MOX77_003767"
     CDS             complement(3460..4263)
                     /gene="cmoM"
                     /locus_tag="MOX77_003767"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine 5-oxyacetic acid(34)
                     methyltransferase CmoM"
                     /protein_id="HCA3359181.1"
                     /translation="MQDRNFDDIAEKFSRNIYGTTKGQLRQAILWQDLDRVLEEIGGR
                     KLRVLDAGGGEGQTAIKMAERGHQVTLCDLSGEMIARARQAAEAKGVSKDMHFIQCPA
                     QDVASHLESPVDLILFHAVLEWVADPVGVLETLWSVLRPGGALSLMFYNANGLLMHNM
                     VAGNFDYVQAGMPKRKKRTLSPDYPRDPAQVYQWLEAIGWQITGKTGVRVFHDYLREK
                     HQQRDCYETLVELETRYCRQEPYISLGRYIHVTAIKSPALAADARITYE"
     gene            4399..5175
                     /gene="elyC"
                     /locus_tag="MOX77_003768"
     CDS             4399..5175
                     /gene="elyC"
                     /locus_tag="MOX77_003768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope biogenesis factor ElyC"
                     /protein_id="HCA3359182.1"
                     /translation="MLFTLKKVIGGMLLPLPLMLLIIGIGLALLWFSRFQKTGKVFIS
                     VGWLALLLLSLQPVSDHLLRPIENRYPTWQGPQKVEYIVVLGGGYTWNPQWAPSSNLI
                     NNSLPRLAEGIRLWRANPGARLIFTGGVAKTNTVSTAEVGARVAQSLGVPRSDIITLD
                     KPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQHAGLNPLPAPANQLAIDSPL
                     NPWERAIPSPVWLMHSDRAGYETLGRLWQWLKGISGKPGE"
     gene            complement(5155..6048)
                     /locus_tag="MOX77_003769"
     CDS             complement(5155..6048)
                     /locus_tag="MOX77_003769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcbJ family phosphotransferase"
                     /protein_id="HCA3359183.1"
                     /translation="MEQLRAELSHLLGEKLSRIECVNEKADSALWSLYDSQGNPMPLM
                     ARSFTTPGVAQQLAWKTSMLARSGTVRMPVIYGVLTHEEHPGLDVLLLERLRGVPVEA
                     PARTPERWEQLKDQIVEGLLAWHRQDSRGCVGAVDHTQENIWPSWYRQRVEVLWTTLN
                     QFSNTGLTMQDKRILFRTREYLPSLFEGFNDNCVLVHGNFCLRSMLKDARSDQLLAMV
                     GPGLMLWAPREFELFRLMDNPLAEGLLWHYLQRAPVAESFIWRRWLYVLWDEVAQLVN
                     TGRFNRTNFDLAAKSLLPWLA"
     gene            complement(6259..7005)
                     /gene="kdsB"
                     /locus_tag="MOX77_003770"
     CDS             complement(6259..7005)
                     /gene="kdsB"
                     /locus_tag="MOX77_003770"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HCA3359184.1"
                     /translation="MSFVVIIPARFSSTRLPGKPLVDINGKPMIVHVLERARESGAER
                     IIVATDHEDVARAVEAAGGEVCMTRADHQSGTERLAEVVEKCGFTDDTVIVNVQGDEP
                     MIPAVIIRQVAENLAQRQVGMATLAVPIHSAEEAFNPNAVKVVLDAEGYALYFSRATI
                     PWDRDRFAKSLETVGDTCLRHLGIYGYRAGFIRRYVSWQPSPLEHIEMLEQLRVLWYG
                     EKIHVAVAKAVPGTGVDTADDLERVRAEMR"
     gene            complement(7002..7184)
                     /gene="ycaR"
                     /locus_tag="MOX77_003771"
     CDS             complement(7002..7184)
                     /gene="ycaR"
                     /locus_tag="MOX77_003771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YcaR"
                     /protein_id="HCA3359185.1"
                     /translation="MDHRLLEIIACPVCNGKLWYNQEQQELICKLDNLAFPLRDGIPV
                     LLENEARALTSDESKS"
     gene            complement(7236..8468)
                     /locus_tag="MOX77_003772"
                     /pseudo
     CDS             complement(7236..8468)
                     /locus_tag="MOX77_003772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459961.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YcaQ family DNA glycosylase"
     gene            complement(8512..>8775)
                     /locus_tag="MOX77_003773"
     CDS             complement(8512..>8775)
                     /locus_tag="MOX77_003773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HCA3359186.1"
                     /translation="HPPRFFATLEACGAHPQKCVPLADHQTLAPADVQALVGEGQTLV
                     MTEKDAVKCRAFAEDNWWFLPVDARLSGEQPDKLLEHITSLVR"
BASE COUNT         1988 a         2572 c         2231 g         1984 t
ORIGIN      
        1 ccgttgatcg ccgccaccag ctggtaagcc tgctcaaact ggctgtgcgc ggtttgcgcc
       61 acgctcattt tttgttccaa cgacagcagt ttttccgtag cttcctgctc ttttgcctgg
      121 aaagtatcca gccattcggc ggcgctttcc ggcgttagat ccggtagatg gcaaagttct
      181 ttagcgcggg caagcgctga tatcgcctgg ttatactgaa tcgcgcgcgt ttgctgtaca
      241 tccagcgcct gctggtaatc cgcaagctgg cttttgagtt catcgacttc cagctcggcg
      301 gcttcggcac gcgcttcatt ttcgtcctgc atttcggcgg cttccgccac cacttcattt
      361 tgctcttcga atcgaatctg cagctcttca agatccgctt cgtagcgttc aattttttcc
      421 tgctggcgca gcgcggtttg caccagattc aggtgatcgc tcgccgcctg gtaatccgct
      481 tcaagagaac cttcggcgcc gttatgttcg cccaactcac gggccatatc gacgtgcttg
      541 tactgctccg ccgccagttg tttgcgcgat gtgtacagtt cgcgtcgaaa cgccaacgcc
      601 tgatcaaggt gaacccgacg ctcattggcg tggcgcatat aatccgccgc cacataatcg
      661 gtggcttcgc tgatcaaatg cttaaacaga tcgcgatcgg attgggtaac acgaatcgct
      721 tccagcgtga gtcggttctc gcgcagcgcc gcttccatat cctggaacgc cttgcgcacg
      781 ccgctgtttt ccggcaataa ataatcgcgt agcgatcggg taatggcgct ggagatcccg
      841 ccgtacagcg aggcctctat caaacgatag aatttactac gatcggaagc ggaacgcaga
      901 cgacgggcga taatccctaa gtcaaacatc agcgaatgat aatcggtgat ggagttaaac
      961 tgcttaaact gcacgccttc catctcgtca agcttgtctt tcagctcagc aagcgacagt
     1021 acgcgcgcct gacgttcgtt taatgtctcc gtcaccagtt gtgtcggctg taccgacatc
     1081 ggcagcccct gaatagcgaa cggtttgatg tccactttgc gatcgcgccc agcgacctgc
     1141 tgcagacgca cgccgaccac cacccgctga tggcgggaat taatggtgtc gagcatggag
     1201 taacagacac ccgccttcag cttaccgtgc agacctttat cgcgcgaacc gctggtggcg
     1261 ccggcttccg tggtgttacg aaagtgcagt aatgtgagat ccgggatcag cgccgtgacg
     1321 aacgccgcca tcgtcgtgga tttcccggcg ccgttgcccc cggataacgt cgtgaccagt
     1381 tcatccaggt caaaagtgcg ggcaaaaaaa ccgttccagt taatcagcgt tagcgagcga
     1441 aatttaccgc gttcaatcat tattcttcct ctccactgtc cggctgactc tcttcggtct
     1501 catcattaag ttgcagatgg ttttcaatgg gcatcgcttc cccgtcgcgg atgagacgac
     1561 gctgcgcctc gcgaggatcg tcgccggcgc ggacatccgc gccaaagcgg aagaccgatt
     1621 cggtaatgcg gaatttgctg ctgtcgtggc ccataaacca taccatgccc aaacgacgca
     1681 ggcggtttaa agaagaacgc accttttcct gcagtttctg acgatcaacg tcagatcccg
     1741 tcgaacggtt attcaccagc tttagcagtt tggcttcgtc cgcaagggta agcagctcgt
     1801 cgtacaactc ctgctgagta aagatccctt cgttggccag acgctccggg ctaagataga
     1861 ggtagcagag aattttaccg accatcatat ccagttcgga taacaccgag cgcgggataa
     1921 gcgtggtaga acgcggacgc aggtaaaaga acccctccgg cgcacgaatc aactccacgt
     1981 tataacgcgc gtaaaactct tccaggtatt cctgaaaatc catcagaaag gcatgattat
     2041 ccagttcgtc cagcccgatg tggcggcccg aacgtaatgc gctatccagc gccggaaata
     2101 acggattcgc cagcgcctgc gccagcttaa ccggcatcac ttgttcaata tttgtcaatg
     2161 acatgcgcct gtaccttggc tccgtaatca ttaatcggct gccatttggc tggcagtccg
     2221 gtgaaatctg cttgcgctac gccaagacgt accgcttgat cgataacaat acgcgccacg
     2281 tcgaaatgac gcgcgcgcgg gtattgcgcc agatactcgc gcaccaccag cccaagatcc
     2341 agtggcgttt gtctggtttt gtagatagcc agctgttctt caatgatggc cgctaactgc
     2401 tcgcggatct cgttaaactc ttcatattcc agatccggcg gcaactcccc ggtgacttca
     2461 tcgtcacgca acgccatctc ttcatcgcgc atatccagca gacgatcggc attcgcgtag
     2521 gttagcgccc acggatcgtc aaaataagtc tgcacggact ggcgcaaccg ctgggcgaag
     2581 atacggtttt tatccatatc gatcgcggta cggataaatt tatgcacgtg acgatcgtag
     2641 ccgatccata aatcaataga ctgctgaccc caactgataa tgcggtcgag tttactttgt
     2701 aagtcaaaca ccagcctgtc gacaaaatgc agatcgtcgt gcgtcatcgt ggcatcctga
     2761 atgcgcagca ggttagcctg cagcttatcg cccgccgcct ccagcgtatc ctgcaactcg
     2821 cgcagcgtac cggacgtttc ggaaagcagc agctcacagc tggaaatcgc cgcccgccag
     2881 tctttattca gcagttgtgc gatatcgtct ttcacctgct gctgctgttc atccataatg
     2941 cgctgggtga gatcgatact gtcgaaaatc tccgccaccg aatatttcaa tggcgcgtaa
     3001 acattgcgat gccagtggaa ctcatcgccc ccctccgctg ccgcatccgc cgcgcgcttc
     3061 aattcgccgg ccacaatcga caactgcata gaaagacgca gcgtagagaa ttcgcgttga
     3121 cgaatgtagt aatcggtgat gccaatcccg agcggggtta atcggtaaat cgcattgcct
     3181 tccgcctgct cgctggtaaa gcggttcagc agacgttgac gcaccatatc gttaatcgcg
     3241 ttgttcgcgc gcacgccgat ggtttcgctg gtttgctcaa acgcatcact cacatggcgg
     3301 aatgcatcca ccagctcgcc ttcactcatc tcgccgtcaa ggcgttcgcc gttcaacgtg
     3361 gcgaccgcca gcagaaagga aagtctgtct accggcagcg agatggaaaa gtcgtttttt
     3421 ctggcccagg caaccagttc ggggactgtc tgggaaaatt cactcatagg ttatccttgc
     3481 atctgcggct agcgccgggc ttttaatcgc ggtgacatga atgtagcgcc caaggctaat
     3541 atacggctcc tggcggcaat aacgcgtttc cagttcgacc agggtctcat aacagtcacg
     3601 ctgctggtgt ttttcacgca gataatcatg aaacacacgc acgccggttt taccggtaat
     3661 ctgccagcca atcgcctcca gccactggta cacctgcgcg gggtcgcgcg ggtagtcagg
     3721 cgacagcgtg cgcttcttgc gtttaggcat ccccgcctgc acgtagtcaa aattacccgc
     3781 caccatattg tgcatcagca aaccgttagc gttatagaac atcaacgaca gcgcgccgcc
     3841 agggcgcaat actgaccaga gcgtttctaa tacgccgaca ggatcggcta cccactccag
     3901 cacagcatga aacaatatca gatcaaccgg gctttccaaa tgcgaagcga cgtcctgagc
     3961 cgggcattgt ataaaatgca tgtctttgct cacacctttt gcctcggccg cctgccgcgc
     4021 gcgggcgatc atttcgccag acagatcgca taacgtcacc tgatggccgc gttccgccat
     4081 cttaatcgcc gtttgccctt cgccgccgcc ggcatccagc acccgcagtt tccgcccgcc
     4141 aatctcctcc agcacgcgat ccaggtcttg ccacagaatg gcttgccgca gttgcccttt
     4201 ggtcgtgccg taaatgttac gggaaaactt ttcagcaatg tcatcaaaat tgcgatcctg
     4261 catcggactc tccacaggct ggctcaggcg ttatctgata aaaccgctat tttgtcacag
     4321 ccgcggcgag aatgaacctg tctggtgtaa tatcaccgtt aatcctccgc tatatggtta
     4381 aaaaaggaac caaaaaggat gctttttacg ctaaagaaag tgattggcgg catgttattg
     4441 ccgcttccgc tgatgttgct gatcattggc atcggcctgg cgctgctctg gtttagccgc
     4501 tttcagaaga ccggaaaagt atttatcagc gtaggttggc tggcgctatt gctattaagc
     4561 ctgcaacccg tctctgacca tttgctgcgt ccgatagaaa accgctaccc tacctggcag
     4621 ggtccgcaaa aggtggaata tattgtggtt ctcggcggcg gctatacctg gaacccgcag
     4681 tgggcgccga gctctaattt aattaacaac agcttgccgc ggctggcgga aggcattcgg
     4741 ctgtggcgcg cgaatccggg agccaggctg atttttaccg gcggcgtagc aaaaaccaat
     4801 acggtaagca cggcggaagt cggcgcgcgg gtggcgcagt cgctgggcgt accgcgtagc
     4861 gatattatta cgctggataa gccaaaagat acggaagaag aagccgccgc cgttaagcag
     4921 gccatcggcg acgccccttt cctgctggta acctccgcct cgcatttgcc gcgtgcgatg
     4981 attttctttc agcatgccgg gctgaatccg cttcccgcgc cggcgaatca gttggcgatc
     5041 gattcgccgc tcaatccctg ggagcgggca attccgtccc cggtctggct gatgcacagc
     5101 gatcgcgctg ggtatgaaac attagggcga ctttggcaat ggctgaaagg catatcaggc
     5161 aagccagggg agtaatgatt tcgccgccag atcaaaattg gtacggttaa aacgtccggt
     5221 attgaccaat tgcgcaacct cgtcccacag cacatagagc caacgccgcc agatgaatga
     5281 ctccgccact ggcgcgcgtt gcagataatg ccaaagcaat ccctccgcca atggattatc
     5341 catcaggcga aacagttcga attctctcgg cgcccacagc atcagcccgg ggccgaccat
     5401 cgccagaagc tgatcgctac gggcgtcttt aagcatactg cgcaagcaga agttgccatg
     5461 caccagtacg cagttgtcgt taaacccttc aaataacgaa ggaagatatt ctctggtacg
     5521 aaacagaatg cgtttgtcct gcatcgtcag gccggtattg ctgaactgat ttagcgtcgt
     5581 ccacagcacc tccacacgct gacgatacca ggaaggccag atattctcct gagtatggtc
     5641 tacggcgccc acgcaaccgc ggctatcctg ccgatgccag gctaacaatc cttcgacaat
     5701 ctgatctttt agctgttccc agcgttccgg agtgcgcgcc ggcgcctcga ccggcacacc
     5761 gcgcagtcgt tccagtagca gcacatccag accaggatgc tcttcatgcg tcaatacgcc
     5821 atagattacc ggcatcctca ccgtaccgct acgcgccagc attgaggttt tccatgccag
     5881 ttgctgcgca acgccaggag tggtaaaact tcgcgccatc agcggcatcg gatttccctg
     5941 gctgtcatat aatgaccaca atgcggaatc cgctttctca ttcacgcact ctatacggct
     6001 aagtttttca cccaacaaat gactgagttc ggcccgcaac tgttccattc cagattaccc
     6061 ccattagtgc tactgcttta ataatgagcg tcgtatggac agatgtcacc cgtatcagat
     6121 caagggaaga aaagaaaaat gaggaaaatc gtaacggtac gagaaagccg ccactgatga
     6181 gcagacgtga gtattcatct ttgcgctatc ataccgcgct gttcatgacc gtctaagacg
     6241 atcatgaaca ggatcatgtt aacgcatttc agcgcgcacg cgctccaggt cgtcggcggt
     6301 gtctacgccc gtgccgggca ccgctttggc gacagcgaca tgaatttttt cgccgtacca
     6361 cagcacacgg agttgctcca gcatttcaat atgttccagc gggctgggtt gccagctcac
     6421 gtaacggcgg ataaatcccg cgcgatagcc ataaatgccc aggtgacgaa ggcaagtatc
     6481 ccctaccgtt tccagacttt ttgcaaagcg atcgcgatcc cagggaatcg tcgcccggga
     6541 aaagtaaagc gcatagcctt cagcatccag cacgactttt accgcattcg ggttaaacgc
     6601 ttcttcggcg ctgtgaatcg gcaccgccag cgtcgccatg ccaacctggc gctgcgccag
     6661 attttccgcg acctggcgaa taataaccgc cgggatcatc ggctcatcgc cctgaacgtt
     6721 cacaataacg gtatcgtcgg tgaatccgca cttctctacc acttccgcca accgttcggt
     6781 gccggactgg tgatcggcgc gcgtcatgca cacttcgccg ccagccgctt ctaccgcacg
     6841 agccacgtct tcatgatcgg tcgcgacaat aatgcgttcc gcgccagatt cgcgcgcccg
     6901 ctccaggaca tgaacaatca tgggtttacc attaatatcc actaatggtt tgcctggcag
     6961 tcgggtagat gaaaaacggg ccggaatgat gacgacgaaa ctcatgattt actctcatca
     7021 gatgtcaggg cgcgagcttc attttccagc aatacaggaa tgccgtcgcg taacgggaaa
     7081 gcgagattat ccagtttgca aattaattct tgctgttcct ggttatacca gagtttgccg
     7141 ttacataccg ggcaggcgat gatttcaagc agacgatgat ccatagttcc tccagatgga
     7201 ccggattgtg aatccttcaa tattaacata atcggttatg gtgcagggtc tatttcccag
     7261 ccatgacgca tggcgctaaa caggcctggc ggacattgtc ccagcgtcac gcgcgatgct
     7321 cgttgccagg cagcaaacgc gctaatggcc tgccagattc ctttttgcag actaacgcca
     7381 gggcgaatat cgtcctccag atacagcgag ataacctcaa gcacccccgt tttacggtgc
     7441 attttggcgt ccattcgccc gactaaacgg ccctggtata atagcggcag cacaaaataa
     7501 ccgtactggc gcttcgccgc gggcgtataa cattccagcc ggtagtcgaa tgcgaagagc
     7561 tgcgctgccc gcttacgatc ccataccaca ggatcgaaag gcgacagtac tgcgctatgg
     7621 gtcgccttta aggcgttatt tagcgccggt tcaagctgcg aaagaagatc ggcatgaagc
     7681 cacatccgcc ccaacgtttc cacctcgacc ggaataatct gctgctgttc cgcccggctc
     7741 tcccgctatc ctttcaggtc aggacgtttc aggcggtagt aatccgccag ccactgttca
     7801 cggaaaatcc ccagactgcg cgcgctatta tccagcatca ggctttccgc ctgcggctgt
     7861 gacagtccat cgcgttcatc atcccagtgc ggcatcacac ggggcgttaa atcatataca
     7921 cgttgaaaat tacgccgctc aacaaccatg acttttccgg cggtaaataa accctcaagg
     7981 tggcgtttat gtggtttcca ttcccaccag ccgctgacgc ctttctgcgc atgttcaaaa
     8041 tcggcagaac gcaccggacc atgctcctga atatgccgca ccagctgttc tatttcttcc
     8101 gcgtgctcat gcatccatgc cgcgcgatat ttccagccca ttttttccgg cgacagcata
     8161 cgatggcgga taagtttaaa gtcgcggcgt ggtaagaaac aggcctcatg cgcccagtat
     8221 tctattaact cgccgcgtcg cagcgcctca tccagccagg cctgcgggta cgaaccgaga
     8281 cggctaaaca gcaccagata ggggctacgt gcgacaacat tgatggtatc aatttgcagc
     8341 aacgccatgc gtgagatggc ggcaagaaca tcgccaggca tcgcgttacg gcgcggcttt
     8401 ttcaatagcc cctgcgcagc aaggtgaaga caacgggcct gggaaagaga aaggtacggc
     8461 aatgacattc atgactccat aaattcatca ctgccgctgc attggggtac gctagcgaac
     8521 cagcgaggtg atatgttcaa gcaacttatc aggctgctcg ccggacaaac gcgcatcaac
     8581 cggtaagaac caccagttat cttcggcgaa agcacggcat ttcaccgcgt ctttttccgt
     8641 cattaccagg gtctgccctt caccgaccaa cgcctgaacg tcagcagggg cgagcgtttg
     8701 atgatcggcc agcgggacgc acttttgcgg atgcgcgcca caggcttcca gcgtggcgaa
     8761 aaagcgcggc ggatg
//
LOCUS       DAGWFR010000165         8725 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.167, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000165 DAGWFR010000000
VERSION     DAGWFR010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 8725)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8725)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8725
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.167"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..232
                     /locus_tag="MOX77_003774"
     CDS             <1..232
                     /locus_tag="MOX77_003774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3359187.1"
                     /translation="IRLADGASPPFGALVVSGKTGRTAGMVGDDGLAYLTGLSGEDRR
                     TLNVPWDGRVQCRLTLPETVTLSRGPLLLPCR"
     gene            273..1016
                     /locus_tag="MOX77_003775"
     CDS             273..1016
                     /locus_tag="MOX77_003775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria/pilus periplasmic chaperone"
                     /protein_id="HCA3359188.1"
                     /translation="MKNSRRSRVILLALAAAWSQYSPAAVNVDRTRIIMDAPQKTVAI
                     TLNNDDKTTPFLAQSWVTDADGVRTDALIALPPLQRIDAGQKSQVRITQVRGLTDKLP
                     QDRETLFWFNVRGVPPKSEDDNVLQLAMQSQLKLFYRPKAIIRSSSDQPERKLTAERN
                     AGHLTLRNPTPYYITVAWLGADRSHRLSGFREGVMVPPLGSLPLKAVLPAETRTLWVG
                     YIDDYGGLQMNRYTCDALNCAFKDAGVTS"
     gene            1013..2089
                     /locus_tag="MOX77_003776"
     CDS             1013..2089
                     /locus_tag="MOX77_003776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3359189.1"
                     /translation="MTEWIFNLKTKLTVLVMMLCSLCVTKVYAVEPGINECVVTSGQN
                     INLRSINLTTDDFKPGPDSVIYSINQDAVFKCSMGYGTQFPQLVFNQGYFSKFTQTLD
                     AMGLGFRMSVKETENVSNVVSFSWDEIKSTQSGNELRKEFGTKLPVGTTERKVRITLD
                     FLYTKAYSESSAVTAFTGISNVLNIVPFPYSLRQNGFVLSGFNVRILRNGLGKVDIVP
                     LQVNFGHIYTTYEPSQTRQANFTVIARQVLRPAMGQEFAIPLAITFGKGALTQDTGQT
                     LNLVSLDGPNKGQPNGLRLSIKDDKGKEITFDKQEVLGDITITGTVTGNVSKVYTAVI
                     TPTLGGSVKTGKFSAAILVTVTYN"
     gene            2234..2746
                     /locus_tag="MOX77_003777"
     CDS             2234..2746
                     /locus_tag="MOX77_003777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001727965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CaiF/GrlA family transcriptional regulator"
                     /protein_id="HCA3359190.1"
                     /translation="MCPDNTHAKKQYLIPGNDIHYPGQTNHDACFIPVSVRQYAGEPL
                     YIIVAHWCLLQQNWVQRNQIAEAFHITARRASYLIAYLRSKTSRVVSICRHQTLPNKA
                     RRYEIYVIRVLDSPTPSTRREKAGPPPVSKRRVGNGDRSMANELWNRLCSNRNAGKIL
                     KKREDEDDRT"
     gene            2733..3491
                     /locus_tag="MOX77_003778"
     CDS             2733..3491
                     /locus_tag="MOX77_003778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HCA3359191.1"
                     /translation="MTEHNRIPARQIIVYGDCWPVTIAVAHLVRRFLPGCNCETAYRL
                     PVLLQQLRRKPEAILILCLRPREHLFLFYSLRQILPDYPVMIISDELFFSDRVVLKVY
                     GGIPALLEQELAEILIRWRRDEQWAGGARLRRTGGLDAFLLSPDPVTGFLEVPPIFNN
                     PKRLMNYMDQLMHREILACGVSLAQLRLLQEVYRGRGRLSALCGRLNTQEKQIWQDKY
                     RLLVKLGMRNRLRELLFGTRFCKSLQRTPFIAPQ"
     gene            complement(3701..4597)
                     /locus_tag="MOX77_003779"
                     /pseudo
     CDS             complement(3701..4597)
                     /locus_tag="MOX77_003779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461941.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nickel/cobalt efflux protein RcnA"
     gene            4719..4991
                     /gene="rcnR"
                     /locus_tag="MOX77_003780"
     CDS             4719..4991
                     /gene="rcnR"
                     /locus_tag="MOX77_003780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni(II)/Co(II)-binding transcriptional repressor
                     RcnR"
                     /protein_id="HCA3359192.1"
                     /translation="MSHTIRDKQKLKARTSKIQGQVIALKKMLDEPHECAAVLQQIAA
                     IRGAVNGLMREVIKGHLTEHIVHQSDEARREEDLDVILKVLDSYIK"
     gene            complement(5022..6251)
                     /locus_tag="MOX77_003781"
     CDS             complement(5022..6251)
                     /locus_tag="MOX77_003781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HCA3359193.1"
                     /translation="MSKIWSKDETLWSFALYGTAVGAGTLFLPIQLGSAGAIVLFITA
                     LVAWPLTYWPHKALCQFILSSKTSAGEGITGAVTHYYGKKIGSIITTLYFIAFFVVVL
                     IYAVAITNSLTEQLAKHIQIDIRIRMAVSFGVVLILNMIFLMGRHATLRVMGFLVFPL
                     IAYFLFLSLYLTGSWQPSLLTGQMSLDSHTLHQVWISIPVMVFAFSHTPIISTFAIDR
                     RENFGDQAMDKCKKIMKVAYLIICLSVLFFVFSCLLSIPPSYIEDARNEGVTILSALS
                     MMPNAPAWLSISGIIVAVVAMSKSFLGTYFGVIEGATEMVRTTLQQVGVKKSRAFNRA
                     LSIMLVSGITFIICCINPNAISMIYAISGPLIAMILFIMPTLSTYLIPALKPYRSIGN
                     FITLVVGLLCVSVMFFG"
     gene            complement(6393..6848)
                     /locus_tag="MOX77_003782"
     CDS             complement(6393..6848)
                     /locus_tag="MOX77_003782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017465480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug/biocide efflux PACE transporter"
                     /protein_id="HCA3359194.1"
                     /translation="MQHDAIQRRSLPERIFHAVCFEGIATAILAPTTAWLMQRSVLEM
                     GGLTILLATTAMIWNIIYNALFDRLWPAHQVRRTAKVRALHALGFESGFIVIGVSIVA
                     WVLNVSLLQAFTLEIGFFLFFLPYTMLYNWAYDVLRQRIVTRRQQRVSA"
     gene            6952..7815
                     /locus_tag="MOX77_003783"
     CDS             6952..7815
                     /locus_tag="MOX77_003783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCA3359195.1"
                     /translation="MRYSPEALMAFVEAVSCGSFSAAARRLRKSQSTISTAIAHLEAD
                     LGFSLFDRSSRQPVLTEEGKRVLSYVQAILSASDRLDEVALTLSGETETRLTFVLSDT
                     LHPDSLEELMAQFDRQFPHTEFECLIGENDDVIDLLQKGRAQIGLIEARDNYPTDIGA
                     TRLLVQSWMGVYVATTHPLASQTNLQWEQLHTWRELRLNTYLDSNANITRGPAWSAPN
                     YLLLLSMAVQGFGWCVLPCALVEEFAAEKPLAQLDVPGWPRAIAIDLLWNKKTPPGTA
                     GNWLRYHLQQK"
     gene            7938..>8725
                     /locus_tag="MOX77_003784"
     CDS             7938..>8725
                     /locus_tag="MOX77_003784"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
                     /protein_id="HCA3359196.1"
                     /translation="MKEVVIVGALRTPIGCFQGTLARHSAVELGSMVVKALIERTGVD
                     ANAIDEVILGQVLTAGAGQNPARQSAIKGGLPTTVSAITINDVCGSGLKALHLATQAI
                     QCGEADIVIAGGQENMSRAPHVLNDSRTGALPDADNLVDSLVHDGLWDAFNDYHIGVT
                     AENLAREYGISRELQDAYALSSQQKARAAIDTGRFKDEIVPIVTQRNGQTAIVDTDEQ
                     PRADASAEGLALLHPAFDSLGSVTAGNASSINDGAAAVMMMSET"
BASE COUNT         2316 a         2061 c         2349 g         1999 t
ORIGIN      
        1 tatccggctg gctgatggcg ccagtccacc gtttggcgcc ctggtggtgt ccggaaaaac
       61 cggcagaacc gcggggatgg tcggggatga cggtctggcc tacctgaccg gactcagcgg
      121 ggaagaccgc cggaccctga acgtgccctg ggatggccgg gtgcagtgca gactcaccct
      181 gccggaaacg gtgacactca gtcgggggcc gctgttactg ccctgcagat aaaaatatcc
      241 ctgtcacaga gcaggactaa cggagaaaac aggtgaaaaa cagcagaaga agccgtgtga
      301 ttttactcgc actggcggca gcatggagcc agtacagccc ggcagccgtc aatgtcgacc
      361 ggacccgtat tatcatggat gcaccgcaga aaacggtggc catcacgctg aataacgatg
      421 acaaaaccac gccgttcctg gcgcagtcct gggtgacgga cgctgacggg gtgagaacgg
      481 atgcgctgat agcgctgcca ccgctgcagc gtattgatgc cggacagaaa tcccaggtcc
      541 gtatcaccca ggttcgcggg ctgacagaca agctccctca ggacagggaa acgctgttct
      601 ggtttaacgt gcggggcgtt cccccgaagt cagaagacga caacgtcctg caactggcca
      661 tgcagagcca gctgaaactg ttttaccgtc cgaaagccat tatcagaagc agcagtgacc
      721 agccggaaag aaagctgact gctgagcgga atgcgggaca tctgaccctc agaaacccga
      781 cgccgtacta catcactgtg gcgtggctgg gagcagaccg cagccacagg ctcagcggtt
      841 tccgcgaggg cgtgatggtg ccgcccctgg ggagcctgcc cttaaaggct gttctgccgg
      901 cagaaacccg gacgctgtgg gtggggtata tagatgatta tggtggactg cagatgaacc
      961 gctacacctg tgatgccctg aactgcgcgt ttaaggacgc aggggtgaca tcatgacaga
     1021 atggattttt aatctgaaaa caaaactgac cgtgctggtg atgatgttgt gttctttatg
     1081 tgtgactaaa gtgtatgcgg ttgagccagg tataaatgaa tgtgtagtca cttctggtca
     1141 gaatattaat ttaagaagta taaatttgac aaccgatgat tttaaacctg gcccggattc
     1201 ggttatctat tcaatcaatc aggatgcagt tttcaaatgt tcaatgggat atggcacgca
     1261 atttccacag ctggtattta atcagggcta cttcagtaaa tttacccaga cactagatgc
     1321 gatgggactt ggattcagaa tgtccgttaa agaaacagaa aatgtttcaa atgttgtttc
     1381 gttctcctgg gatgaaataa agagcactca gtcaggaaat gagttacgaa aagagtttgg
     1441 cacaaaacta cctgttggaa ctacagagcg aaaagtaagg ataacactgg atttcttata
     1501 tacaaaagca tattcagaga gtagtgcagt tacagctttt acggggataa gtaatgtttt
     1561 aaatattgta ccttttcctt attctttgag acaaaacgga tttgttttat ctggttttaa
     1621 tgtgagaatt ctcagaaacg gattgggtaa agttgacatt gttccattac aggtcaactt
     1681 tgggcatatt tatacgactt atgaaccttc acagaccaga caggcaaatt ttacagtgat
     1741 cgccaggcag gttttacgac cggctatggg acaggaattc gcgatcccgc tggccatcac
     1801 cttcgggaaa ggtgcgctga cacaggatac cgggcaaact ctgaatcttg tcagtctgga
     1861 tggccccaac aaaggtcagc ctaatggact ccggctttca ataaaagatg ataaaggaaa
     1921 agagattact tttgataaac aagaagtact gggggatatt actattacag gaactgtcac
     1981 cggtaatgtg tcgaaggtat atactgcagt aataaccccg accctggggg gaagtgtaaa
     2041 gacaggaaag ttttctgctg caatactcgt tactgttacc tataactaat cgggggtgac
     2101 agataataaa aataaaagag ctgactgagt tatcggggaa ctaatcccga ataaacccac
     2161 attaataata aatactattt aagagctgtt cttcacctcc ggaaaattat ttacccagtt
     2221 atggagaggt tttatgtgcc ctgataatac acacgcaaaa aagcagtacc ttatcccagg
     2281 taacgatatt cattatcccg gacagaccaa ccatgatgcc tgttttattc cggtaagtgt
     2341 ccgccagtat gccggcgagc ccctgtatat catcgtggca cactggtgcc tgttgcagca
     2401 gaactgggtt cagcgtaacc agatagcaga ggcgtttcac atcacggcca gacgggccag
     2461 ctacctgatt gcctatctgc gaagcaaaac atcgcgggtg gtcagcatct gccgtcacca
     2521 gaccctgccc aataaagcac gacgctatga gatttatgtt atccgggttc ttgacagtcc
     2581 caccccgtcc acgcgccgtg aaaaagccgg accgccgccg gtatcaaaac gccgggtcgg
     2641 taatggtgac aggtcgatgg caaatgaact gtggaaccgg ctgtgcagta acagaaatgc
     2701 gggaaagatc ctgaaaaaga gggaggatga ggatgacaga acataaccgg ataccggccc
     2761 ggcagattat cgtttacggt gactgctggc cggtgacgat cgccgtggca cacctggtcc
     2821 ggagatttct gccgggctgc aactgtgaaa ccgcatacag gctgcctgtt ctgttgcagc
     2881 aattacgtcg gaaaccggag gccatactga tactgtgtct gcgtccccgt gaacatctct
     2941 ttttgttcta ttccctgagg cagatactgc cggactaccc ggttatgatt atcagcgatg
     3001 agctgttttt cagcgaccgg gtggtactga aggtatacgg cggcatcccg gcgctgctgg
     3061 agcaggaact ggcggagata cttattcggt ggcggcggga tgaacagtgg gccgggggcg
     3121 cacgcctgcg caggacagga gggctggacg cctttttgtt atctccggat ccggtgacgg
     3181 gctttctgga agtgccaccg atatttaaca atccgaagcg gttgatgaac tatatggacc
     3241 agttgatgca ccgggagata ctggcatgcg gagtgagcct ggcccagtta cgcttgcttc
     3301 aggaagttta ccgtggacgg ggaaggttat cagcgctgtg tggaaggctg aacacgcagg
     3361 agaagcaaat ctggcaggac aaataccggt tactggtgaa gctgggaatg cggaaccgat
     3421 tacgggaact gctgtttggt acccggtttt gtaaatcact gcagcgaact ccgtttatcg
     3481 ctccgcaata acccgcctcc ggcgacccta tccagaaaca ctgacacacc ggctaaaccc
     3541 ggtggcggtg gggtatgttt tgcctgtggt gtagtggagt aaaatacaga attcaggcgg
     3601 gacgctgaat gtatggcctt tcataccgtt tgataagtaa aaacgcttct ggaatgaaac
     3661 ccgaagtgaa tgatacggcc tgagcagaag cgttacatat ttactgcatg atcccggtat
     3721 agccatgaat tcccatatac acgccgacca gaccaatcag aatgctcgaa aaatagggcg
     3781 cccgccgggc aagcgtcgaa aaaccactcc agcgctttgc tgcctgttga acgcttatcg
     3841 ccgcgccaac gcctaccgtc accagcgtta atgccaggcc aagactaaag ctcagcacca
     3901 tcgtggcacc cagcgtaaac gctttaagct ggatacaaat cagtaaaacg gtgatcgcag
     3961 ccggacaggg gataagccct ccggtcaggc cgaacagcag gatctgtcca ttattcactg
     4021 tttgaccatc aaaacggcgt tgaatatcgg cagcatgggc gcgttcatgg gcatcctgat
     4081 acgcttttga cgttgcgcct tccggatgta tgtgaccatg atggtcatgg tcatggtcat
     4141 ggtcatggtc atggtcatgg tcatggtcat ggtcatggtc atggtcatgg tcatggtcat
     4201 ggtcgtaatg gtggtcgtga tggtggtcgt gatggtggtt tcccgccagc cactgctgct
     4261 cgcctcgtca tgtccgccag aacatccagc acgcggtgct cagaataatg atcgcagaaa
     4321 ttaactgcag ccatggttcc actgattgtg cggtgaatgc ccggctaaga tacatcccac
     4381 ccagcgcgat taaccagacg atcgcggtat gagaaagcgt tgctgccaga ccgagcatga
     4441 cagcctgttt aaccgtacct ttaatggcaa tgataaaagc cgccatcatg gttttggagt
     4501 gccctggttc aagcccgtgc aaaataccta ataaaatggc gctgggaatg aagaaccagc
     4561 cgtttccttg ctgaagaagt gtcgaaaatt cacccatgag aatgattctt agttgtttta
     4621 tgtgggcgtc attctactcc cccccagtat ggaatactac cccccagtag catcgtaatg
     4681 ctataatttg tattcgttaa tgttagtgag gtgttgtaat gtcacatacc atccgggaca
     4741 aacaaaagct taaagccaga accagcaaga ttcaggggca ggtgatagcg ctaaaaaaaa
     4801 tgctggatga accgcatgaa tgcgcggccg tgttacaaca gatcgcggcg attcgcggcg
     4861 cggtaaatgg cttaatgcgc gaggtgatta aagggcatct gaccgagcat atcgttcatc
     4921 agagtgatga agccagacgt gaagaagatc tggacgtaat attaaaggtg ctggattctt
     4981 atataaaata gccgggagtt atatcccggc tatcttttac tttagccgaa aaacatcacc
     5041 gatacgcaaa gtaaaccgac gaccaacgta atgaaattac ctattgaacg gtagggtttc
     5101 aatgccggta tcaggtacgt tgacaacgtg ggcataataa acagaatcat cgcaatgagc
     5161 gggccgctaa tggcataaat catagagatg gcattcgggt taatacagca aataataaac
     5221 gtaatcccgg aaaccagcat gatagacagc gcgcgattga acgcccggct ttttttcacg
     5281 ccaacctgct gtagggtggt tcttaccatt tcggttgcgc cctcgatgac gccgaaatag
     5341 gtgccgagga aagatttcga catggccacg acggcaacga taataccgga aatagagagc
     5401 caggccggcg cattgggcat catcgagagc gcggaaagga tggtaacgcc ttcgttgcgc
     5461 gcgtcttcaa tgtatgacgg cggaatggag agcaggcagc taaagacaaa gaacagcaca
     5521 ctcaggcaga taatcaggta ggcgaccttc atgatctttt tgcatttatc catggcctga
     5581 tcgccaaaat tttcccgtct gtcgatggca aacgtcgaaa taatgggcgt atggctaaaa
     5641 gcaaaaacca tcaccggaat agaaatccat acctggtgca acgtgtgact atccaaagac
     5701 atctgcccgg tcagtaacga gggttgccag cttccggtta agtagagcga aaggaacaag
     5761 aagtaagcga taagtggaaa gactaaaaag cccattacgc gaagagtggc atgtcttccc
     5821 attaagaaaa tcatattcag gataagtact acgccgaagc taactgccat ccggatgcga
     5881 atatctatct gaatatgctt cgctaattgc tctgtcaggg aattggtaat cgccacagca
     5941 taaattaata ccacgacaaa aaacgcaatg aaataaagcg tggtaataat actgccgatt
     6001 ttcttgccgt aataatgagt aacggcgcca gtaattccct cacctgcaga agtctttgag
     6061 gaaagaataa actgacacag cgccttatgc ggccagtatg ttagaggcca ggcgaccagc
     6121 gcggtaataa atagcacgat tgcgcctgcc gatcccaact ggatgggaag gaaaagagtg
     6181 cctgcgccta cagccgttcc gtataatgca aaactccaga gagtctcatc ttttgaccaa
     6241 attttagaca ttatttgaat ttatcaacta taaaacacac aaaaagaagc gcaatttacc
     6301 ataaatagcg tcagttgggg gcgttttaag cagatggatg tcgtggagga ggagggccgg
     6361 gagcgttgcg atcccggcaa aaaagagcaa tatcatgcac taacgcgctg ttggcggcgg
     6421 gtcactattc gttggcgtaa aacatcgtat gcccagttgt acagcatcgt gtacggcaaa
     6481 aagaacagga agaaaccaat ttccagggtg aatgcttgta gcaggctgac attcagtacc
     6541 caggcgacaa tactcacgcc aatgacaata aacccacttt caaatcctaa cgcatggagt
     6601 gcgcgcactt tggcggttcg tctcacctga tgcgcaggcc acagtcgatc aaacagagcg
     6661 ttataaatga tattccagat catggccgtc gttgccagca atatcgtcag gccgcccatc
     6721 tccagcaccg agcgctgcat tagccaggcg gtcgttggcg ccagtatcgc agtcgcaata
     6781 ccttcaaaac agacagcatg gaaaatacgc tccggcagcg agcgacgttg tatggcgtca
     6841 tgttgcataa atgaaaaaac cttactctta atcaaattaa agaaatttcc gctattttat
     6901 cgtttaatat gatacctaaa agataaaatc catcgataaa gtagataggt tatgcgttac
     6961 tcacctgaag cgttaatggc atttgttgag gccgtctctt gcggctcgtt ttctgcggcg
     7021 gcgcgccgcc tgcgtaaaag ccagtccacc attagtaccg ccattgcgca tctggaggcg
     7081 gatctgggat tttcattatt tgatcgatca tcgcgccagc ccgttctgac cgaagaagga
     7141 aaacgggtgc ttagctatgt tcaggctatt ttatcggcga gcgaccgtct ggatgaggtg
     7201 gcgctgacgt tatccggcga gacggagaca aggctcacgt tcgtcctctc tgataccctg
     7261 caccctgaca gtctggaaga gttaatggcg cagtttgatc gtcaattccc gcataccgag
     7321 tttgaatgtt tgatcggaga aaatgatgat gtcatcgacc tgctgcaaaa agggcgcgcc
     7381 cagataggcc tgattgaagc gcgtgataac tatcccacag acattggcgc gacgcgtctg
     7441 cttgttcaaa gctggatggg ggtttatgtg gcgaccacgc atccgttggc gtcgcagacg
     7501 aacctgcaat gggagcaact gcatacctgg cgcgagctgc gtctgaatac ctaccttgac
     7561 tctaacgcca acattacgcg cggcccggcc tggtcagcgc caaactattt attgctgttg
     7621 agcatggcgg ttcagggatt tggctggtgc gtattgccct gcgcgctggt ggaagagttt
     7681 gcggcggaaa aaccgctggc gcagctggat gttcctggct ggccgagggc gattgctatt
     7741 gatttgttgt ggaacaagaa gacgccgccc ggaacggcgg ggaactggct tcgctaccat
     7801 ttacagcaga aataagctgc gccaccgtca aatcagcgtc atttcctttg tgataaaact
     7861 cacttttttt aaacaatcaa gataactaat tttaacaatg ctctactatg gcggtgtcat
     7921 tttgcgctga ggtggtaatg aaagaggttg tgatagtggg ggctttacgg acacccatcg
     7981 gctgttttca gggaacgctg gcccgtcatt ccgccgtcga gctggggagt atggtcgtaa
     8041 aagcgttaat tgagcgcacc ggcgtggacg ctaatgctat cgatgaggtc atcctcggtc
     8101 aggtactgac ggctggcgcc gggcagaatc cggcgcgcca gtcagccatc aaaggagggc
     8161 tgccgactac cgtttccgct attaccatta atgacgtttg tggttccggt ttaaaagcgt
     8221 tgcacctggc gacgcaggct attcagtgcg gcgaagcgga cattgttatt gcgggcgggc
     8281 aggagaatat gagccgtgcg ccgcatgtcc tcaatgacag ccgtaccggc gcgttgcctg
     8341 atgccgacaa tctggtggat agtctggtac atgatggctt atgggatgcc ttcaacgatt
     8401 atcacattgg cgtgacggca gaaaacctgg cgcgggaata tggcatcagc cgcgagttac
     8461 aggatgctta tgcgctcagt tcgcaacaaa aagccagggc cgcgattgat accggacgtt
     8521 ttaaagatga gattgtcccc atcgtcacgc aacgtaatgg gcagaccgca attgtcgata
     8581 cggatgaaca accgcgggcc gacgccagtg cggaggggtt agccctgctg catccggcgt
     8641 ttgatagttt aggttcggtg acggcgggta atgcctcttc aatcaacgat ggcgccgccg
     8701 cggtgatgat gatgagcgag acgaa
//
LOCUS       DAGWFR010000166         8573 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.168, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000166 DAGWFR010000000
VERSION     DAGWFR010000166.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 8573)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8573)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8573
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.168"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            168..1844
                     /locus_tag="MOX77_003785"
     CDS             168..1844
                     /locus_tag="MOX77_003785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Kef family K(+) transporter"
                     /protein_id="HCA3359197.1"
                     /translation="MHHATPLITTIVGGLVLAFILGMIANKLRISPLVGYLLAGVLAG
                     PFTPGFVADTKLAPELAELGVILLMFGVGLHFSLKDLMAVKSIAIPGAVAQIAVATLL
                     GMALSAVLGWSLMTGIVFGLCLSTASTVVLLRALEERQLLDSQRGQIAIGWLIVEDLV
                     MVLTLVLLPAVAGMVEKGDVGIASLAVDMGITIGKVVAFIAIMMLVGRRLVPWIMARS
                     AATGSRELFTLSVLALALGIAFGAVELFDVSFALGAFFAGMVLNESELSHRAAHDTLP
                     LRDAFAVLFFVSVGMLFDPLVLIQQPLAVLATLAIIVFGKSIAAFFLVRMFGHSPRTA
                     LTIAASLAQIGEFAFILAGLGMALNLLPQAGQNLVLAGAILSIMLNPVLFTLLEKYLA
                     KTETLEEQTLEEAIEEEKQIPVDICNHALLVGFGRVGSLLGEKLLAAGIPLVVIETSR
                     TRVDELRERGIRAVLGNAANEEIMNLAHLDCARWLLLTIPNGYEAGEIVASAREKSPD
                     IEIIARAHYDDEVKYITERGANQVVMGEREIARAMLELLETPPAGEVVAS"
     gene            complement(1893..3197)
                     /gene="gsk"
                     /locus_tag="MOX77_003786"
     CDS             complement(1893..3197)
                     /gene="gsk"
                     /locus_tag="MOX77_003786"
                     /EC_number="2.7.1.73"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inosine/guanosine kinase"
                     /protein_id="HCA3359198.1"
                     /translation="MKFPGKRKSKHYFPVNARDPLLQQIQPEQETNASWVVGIDQTLV
                     DIEAKVDDDFITRYGLSAGHSLVIEDELAEKLYQELTRENLITHQFAGGTIGNTMHNY
                     SVLADDRSVLLGVMCSNIEIGSYAYRYLCNTSSRTDLNYLQAVDGPIGRCFTLIGESG
                     ERTFAISPGHMNQLRAESIPEAVIAGASALVLTSYLVRCKPGEPMPDATMKAIEYAKK
                     HNVPVVMTLGTKFVIADNPQWWQAFLKENVSILAMNEEEAEALTGENDPLLAADKALD
                     WVDLVLCTAGPIGLYMAGFTEEEAKRKTQHPLLPGAIAEFNQYEFSRAMRHKDCTNPL
                     RVYSHIAPYMGGPEKIMNTNGAGDGALAALLHDITANSYHRSNVPNSSKHKFTWLTYS
                     SLAQVCKYANRVSYQVLNQHSPRLTRGLPEREDSLEESYWDR"
     gene            3350..4321
                     /gene="aes"
                     /locus_tag="MOX77_003787"
     CDS             3350..4321
                     /gene="aes"
                     /locus_tag="MOX77_003787"
                     /EC_number="3.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl esterase"
                     /protein_id="HCA3359199.1"
                     /translation="MKPENKIPVLTRLSDEMTAVVNFQQPGLPPWPADGDIETQRQYY
                     LLERRFWNADAPSMTTRTCAVSTPYGDVTTRLYSPQPTSQATLYYLHGGGFILGNLDT
                     HDRIMRLLARYTGCTVIGIDYSLSPQARYPQAIEETVAVCSYFSQHADEYSLNVEEIG
                     FAGDSAGAMLALASALWLRDKHIRCGNVIAILLWYGLYGLQDSVSRRLFGGAWDGLTR
                     EDLDMYEKAYLRNDEDRESPWYCLFNNDLTRDVPPCFIASAEFDPLIDDSRLLHQTLQ
                     AHQQPCEYKMYPGTLHAFLHYSRMMTIADDALQDGARFFMARMKTPR"
     gene            complement(4318..5280)
                     /gene="hemH"
                     /locus_tag="MOX77_003788"
     CDS             complement(4318..5280)
                     /gene="hemH"
                     /locus_tag="MOX77_003788"
                     /EC_number="4.99.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HCA3359200.1"
                     /translation="MRQTKTGILLANLGTPDAPTPEAVKRYLKQFLSDRRVVDTPRLL
                     WWPLLRGVILPLRSPRVAKLYQSIWMDGGSPLMVYSREQQQALAARLPDTPVALGMSY
                     GSPSLESAVDELLASDVDHIVVLPLYPQYSCSTVGAVWDELGRILARKRRIPGISFIR
                     DYADDGAYIDALAKSARESFARHGEPDLLLLSYHGIPQRYADEGDDYPQRCRDTTREL
                     VSALGLPPEKVMMTFQSRFGREPWLTPYTDETLKMLGEKGTGHIQVMCPGFAADCLET
                     LEEIAEQNREIFLEAGGKKYAYIQALNATPEHIDMILKLTAPYR"
     gene            complement(5510..6154)
                     /gene="adk"
                     /locus_tag="MOX77_003789"
     CDS             complement(5510..6154)
                     /gene="adk"
                     /locus_tag="MOX77_003789"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007706188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HCA3359201.1"
                     /translation="MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSE
                     LGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKEAGIV
                     VDYVLEFDVPDELIVDRIVGRRVHAASGRVYHVKFNPPKVEGKDDVTGEDLTTRKDDQ
                     EETVRKRLVEYHQMTAPLIGYYQKEAEAGNTKYAKVDGTQAVADVRAALEKILG"
     gene            complement(6570..8444)
                     /gene="htpG"
                     /locus_tag="MOX77_003790"
     CDS             complement(6570..8444)
                     /gene="htpG"
                     /locus_tag="MOX77_003790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003903109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone HtpG"
                     /protein_id="HCA3359202.1"
                     /translation="MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAAD
                     KLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTIADNGVGMNRDEVIDHLGTIAKSGT
                     KSFLESMGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGDKPENGVFWESAGEG
                     EYTVADITKNDRGTEITLHLREGEDEFLDDWRVRSIISKYSDHIALPVEIEKREEKDG
                     ETVISWEKINKAQALWTRNKSEIKDDEYNEFYKHIAHDFTDPLTWSHNRVEGKQEYTS
                     LLYIPSQAPWDLWNRDHKHGLKLYVQRVFIMDDAEQFMPNYLRFVRGLIDSNDLPLNV
                     SREILQDSTVTRNLRSALTKRVLQMLEKLAKDDAEKYQTFWKQFGLVLKEGPAEDHAN
                     QEAIAKLLRFASTHTDSSAQTVSLEDYVSRMKEGQEKIYYITADSYAAAKNSPHLELL
                     RKKGIEVLLLSDRIDEWMMNYLTEFDGKAFQSVAKADESIEKLADEVDENAKEAEKAL
                     EPFVERVKTLLGDRVKEVRLTHRLTDTPAIVTTDADEMSTQMAKLFAAAGQSVPEVKY
                     IFELNPDHVLVKRTADTKDEAQFKEWVELLLDQALFAERGTLEDPNQFIRRMNQLLVS
                     "
BASE COUNT         1819 a         2380 c         2278 g         2096 t
ORIGIN      
        1 ccatcttgct ttgtccatcc catgcttatc acttttacgt tccatgctct ttttgccttc
       61 agatcgtatc tttttataaa acacaaccat tttttataaa catcctgatt gaaattgtca
      121 taaactatta cccggagttt tggagtccag caaccaaagg agacggaatg catcacgcta
      181 ccccgcttat caccaccatt gtcggcggcc ttgtgctcgc ttttattctc ggcatgattg
      241 ccaacaaatt gcgtatttct ccactggtgg gatatctgtt agcgggcgtt ctggcgggac
      301 cttttacccc aggttttgtt gcggatacca aactggcgcc ggagctggcg gagctcggcg
      361 tgattctatt gatgttcggc gtcgggctgc atttttcgct gaaggatttg atggcggtaa
      421 agtctatcgc cattcccggc gctgtcgctc agatagcggt ggcgacgctg ctgggtatgg
      481 cgctttccgc cgtgctggga tggtcattaa tgaccggcat cgtttttggg ctctgtctgt
      541 ctaccgccag taccgtcgtc ctgctgcgcg cgcttgagga gcgacaactc cttgatagcc
      601 agcgcgggca aatcgccatc ggctggctga ttgtcgaaga tctggtgatg gtgctgacgc
      661 tggtcttgct gcccgccgtt gccggcatgg tggaaaaagg cgatgtcggc atagcctcgc
      721 tggcagtcga tatggggata accattggta aagtggtggc gtttatcgcc atcatgatgc
      781 tggtcggacg ccgcctggtg ccgtggatta tggcccgcag cgccgccacc ggctcgcgcg
      841 agttatttac cctttccgta ctggcgctgg cgttaggcat tgcgtttggc gcggtagaac
      901 tgtttgacgt ctcttttgcg ctgggcgcgt tcttcgctgg aatggtgctt aatgagtcgg
      961 aactgagtca ccgggcggcg cacgatacgt tgccactgcg cgacgccttt gccgtcctgt
     1021 tttttgtttc cgtcggcatg ttgttcgatc cgctagtctt gattcaacag ccgctggcgg
     1081 tgttggcgac gcttgccatt atcgtctttg gtaaatcgat cgctgcgttt ttcctggtgc
     1141 gtatgttcgg ccactcgccg cgaaccgcgc tgaccattgc cgccagcctg gcgcaaatcg
     1201 gtgagttcgc ctttattctc gccggactcg gtatggcgct caatctgctg ccgcaggcgg
     1261 gacagaacct ggtgctggca ggcgctattt tgtcgattat gcttaatccc gtactgttta
     1321 ccctgctgga gaagtatctg gcgaaaaccg aaacgctgga agagcaaact ctggaagagg
     1381 ctatcgaaga agagaagcaa attccggtgg atatctgtaa tcatgccctg ctggtgggtt
     1441 ttggccgcgt aggcagtctg ctgggagaaa aattactggc ggcggggatt ccgctggtgg
     1501 ttatcgaaac gtcccgtacc cgcgtggatg aactgcgcga acgcgggatt cgcgccgtac
     1561 tgggcaacgc cgctaacgaa gaaatcatga atctggcgca tctggactgc gcccgctggc
     1621 tgttattgac catccccaac ggttacgaag ccggtgagat tgtcgcctca gcgcgagaaa
     1681 aaagccctga tatcgagata atcgcccgcg cgcactatga tgatgaagtg aaatatatta
     1741 ccgagcgggg agccaatcag gtagtgatgg gcgagcgaga aattgcccgg gcgatgctgg
     1801 aactgcttga aacgccgccc gcgggtgaag tcgtcgccag ttaagggttt gccggacggc
     1861 ccgatgcgcg cagcgccatc gggcaagcca gattagcgat cccagtacga ctcttccagg
     1921 ctgtcctcac gttccggcag cccgcgtgtc agacgcggag aatgctggtt cagtacctga
     1981 taactgacac ggttagcata tttacacacc tgcgccagcg acgaataggt cagccaggtg
     2041 aatttgtgct tactggagtt cggtacgttg ctacgatggt aactgttcgc cgtaatatcg
     2101 tgcagcagcg ccgccagcgc gccatcgccc gcgccgttgg tgttcatgat tttttccggc
     2161 ccgcccatat acggcgcaat atgcgaataa acgcgcagcg gattagtaca atctttatgg
     2221 cgcattgccc ggctaaattc atactggtta aattcagcaa tagcccccgg cagcagagga
     2281 tgctgggttt tacgttttgc ttcctcttcg gtgaagcctg ccatatataa ccctatcggc
     2341 ccggcggtgc ataacaccag gtcgacccag tccagcgcct tatccgccgc cagcagcggg
     2401 tcgttttcgc cggtcagcgc ttccgcttct tcttcattca ttgccagaat cgagacattc
     2461 tctttgagaa acgcctgcca ccactgcgga ttatcggcga tcacaaattt ggtgcccagc
     2521 gtcatgacaa ccggcacgtt atgctttttc gcgtattcga tcgctttcat cgtcgcgtca
     2581 ggcatcggtt cgccaggctt acagcgcacc agatatgagg tcaacaccag cgcggaagcg
     2641 ccagcgatca ccgcttccgg aatactttcc gcccgtagct gattcatatg gccggggctg
     2701 atagcgaagg tacgctcgcc ggattcgcca atcagcgtga aacagcggcc aatcggacca
     2761 tctaccgctt gcagataatt caggtcggta cggctggaag tattacacag gtagcgataa
     2821 gcgtagctgc caatctcaat gttgctgcac atcacgccca gtaacaccga acggtcatcc
     2881 gccagtaccg agtaattatg catcgtattg cctatggtgc cgccagcaaa ctgatgggtg
     2941 atcagatttt cccgcgtcag ttcctgatac agcttctccg ccaactcgtc ttctatcacc
     3001 agagaatgcc cggcgcttaa tccatagcgt gtaataaaat cgtcatccac tttcgcctca
     3061 atatccacca acgtctggtc gataccgacg acccaggagg cgttggtttc ctgttctggc
     3121 tgaatttgtt gcaacaacgg gtcacgcgca ttgacgggaa aatagtgttt ggatttacgt
     3181 ttaccgggaa atttcatgat tgtgcttacg gatgaataac ggagcgctgc atggtagcac
     3241 attccccctg ctgcgcgcga cggacgatgg cgtttcaata tcggacgacg agatcgcagt
     3301 ttctccagcc gcgtttttta caatggttca ctttcacaag gagcgtttta tgaagccgga
     3361 aaataaaatt cccgtactca cccgactgtc tgacgaaatg acagccgtcg taaacttcca
     3421 gcaaccaggc cttcccccct ggcctgccga tggcgatatt gagacccagc gtcagtatta
     3481 tcttcttgag cgccgtttct ggaatgccga cgcgccgtcc atgaccaccc gcacctgcgc
     3541 cgtctctacg ccttatggcg atgtaacaac ccggctctac tcgccgcagc cgaccagtca
     3601 ggccacctta tactatctgc acggcggcgg atttatcctc ggtaatctgg atacgcatga
     3661 ccggataatg cgtctgctgg cgcgttatac cggctgcacc gtgatcggta ttgattattc
     3721 gctgtcgccg caagcgcgtt atccgcaggc cattgaagaa accgtcgcgg tatgcagcta
     3781 cttctctcaa catgccgatg aatactcgct caacgtggag gaaatcggtt tcgccggaga
     3841 ttccgcaggc gccatgctgg cgcttgccag cgcgctctgg ctacgtgata agcacattcg
     3901 ctgcggtaac gttatcgcga ttctgttgtg gtatgggctg tatgggttgc aagattcggt
     3961 aagccgccgt ctgttcggcg gcgcgtggga cggcctgacg cgtgaagatc tggacatgta
     4021 cgaaaaggcc tatctgcgta acgatgaaga tcgggaatcg ccctggtatt gtctgtttaa
     4081 taacgatctc acgcgcgatg tgccgccctg ctttattgcc agcgcggagt ttgatccgct
     4141 cattgatgac agccgcttgc tgcaccagac attacaggcg caccagcagc cctgcgaata
     4201 caaaatgtat cccggcacgc tgcacgcctt cctgcactat tcgcgaatga tgacaatcgc
     4261 cgacgatgcc ttgcaggacg gcgcacgctt ctttatggcg aggatgaaga cgccgcgtta
     4321 acggtacggc gccgtgagtt tcagtatcat atcaatatgt tccggcgtcg cgttcagcgc
     4381 ctgaatgtac gcatattttt taccgcccgc ttcaaggaaa atctcgcggt tctgttccgc
     4441 tatctcttcc agcgtctcca gacaatccgc ggcaaacccc ggacacatga cctgaatatg
     4501 gccagtcccc ttttcaccca acatttttag cgtttcatcg gtgtacggcg tcagccacgg
     4561 ttcacggcca aagcgcgact ggaacgtcat cattaccttt tccggcggca gtcccaatgc
     4621 ggaaaccagt tcacgcgtgg tatcgcgaca gcgctgcggg tagtcatcgc cttcatccgc
     4681 ataacgttgt ggaatgccgt gataggagag cagaagtaaa tccggctcgc cgtgtctggc
     4741 gaacgactca cgcgcgcttt tcgccagcgc atcgatataa gcgccgtcat ccgcgtaatc
     4801 gcgaataaat gagatcccgg gaatacgacg tttacgcgcc agtatccgcc ccagttcgtc
     4861 ccagactgcg cccaccgttg agcaagaata ttgcgggtac aacggcagca cgacgatatg
     4921 gtcgacgtcg cttgctaaca gttcatcgac agcgctttcc agcgagggcg agccgtagct
     4981 catccccagc gcgacgggcg tgtctggcaa ccgcgcggcc agcgcctgtt gctgttcgcg
     5041 gctatatacc atgagcggcg aaccgccatc catccagata gattgataga gtttcgcgac
     5101 gcgcggcgaa cgcagcggta aaataacgcc acgcagcagc ggccaccaca gcagacgagg
     5161 agtatccacc acgcgtctgt cgcttaaaaa ttgtttcagg tagcgcttta ccgcttcagg
     5221 agttggggca tctggcgtgc caaggttagc cagcaggata ccggttttcg tctgacgcat
     5281 tgccgcctct tatctattca aattgttgat aattgtagcg gaaaagcgat aaagaagaac
     5341 taattgctgc gagaggtaag acgagaattt gccgaatggc gctaacgata ccggtaggcc
     5401 ggataaggcg ttcaggccgc cattcggcac cgattgcctg atggcgctac gcttatcagg
     5461 cctgcgggat aatggcaggc ctgataagcg gttcactacg cgaaaaaaat taaccgagga
     5521 ttttttccag cgctgcgcgc acgtcggcaa cggcctgcgt accgtcaact ttagcgtatt
     5581 tggtgttgcc cgcttccgct tctttctggt agtagccaat cagcggcgcg gtcatctgat
     5641 gatattccac cagacgtttg cgaacggtct cttcctgatc gtctttacgg gtcgtcagat
     5701 cttcgccggt gacgtcatct ttgccttcca ctttcggcgg attaaactta acgtggtaaa
     5761 cgcggccaga ggcggcgtgt acgcgacgac ccacaatacg gtcaacgatc agttcgtccg
     5821 gtacgtcgaa ttccagcacg taatccacca caatacccgc ttctttcatc gcgtcagcct
     5881 gcgggatcgt gcgcgggaaa ccgtccagca gaaaaccgtt acggcagtct tcctgggcga
     5941 tacgctcttt aaccagcgca atcaccagtt catcggtcac cagtttaccg gcgtccatga
     6001 tatctttcgc ctgtttgccc aactcggagc ctgatttcac tgcggcgcgc agcatatcgc
     6061 cagtggagat ttgcggaata ccatatttct ccatgatgaa ctgagcctga gttcctttac
     6121 ccgcgcccgg agcgccaagc agaataatac gcattacgaa aatcccctca aaggttgtcg
     6181 atatttttta aaaagcgcta aacgatacca ccatcacgca tttcgctcaa ggaagtcgcc
     6241 tgatgctgaa acggttaacg aagagaaatc cagaaaagag aaggtattat aaaaaatgcc
     6301 ggatggcgct ggcgcttatc cggcctacaa acagtactcg tccgtaggcc ggataagatg
     6361 cttcgcgtcg ccatccggca gtcacaaaac agtactcgcc cgtaggccgg ataagacgct
     6421 tcgcgtcgcc atccggcagt cacaaaacag tacccgtccg taggccggat aagatgcttc
     6481 gcgtcgccat ccggcagtca caaaacagta cccgcccgta ggtcgggtaa gacgcttcgc
     6541 gtcgctatcc ggcaatcaga tgagcgttat caggacacca gcaactggtt catacggcgg
     6601 ataaactggt tcggatcttc cagcgtaccg cgttcagcga acagcgcctg atccagcagc
     6661 agctcgaccc actctttaaa ctgcgcttca tccttggtat cggcagtgcg tttgaccagc
     6721 acatgatccg ggttgagctc aaagatgtat ttcacttccg gcacggactg accggccgcg
     6781 gcgaacagtt tcgccatctg ggtgctcatt tcatccgcat cggtggtgac aatcgccggc
     6841 gtgtcggtta aacggtgtgt cagacgcacc tctttcacgc gatcgcccag cagggttttg
     6901 acacgctcca cgaacggctc aagcgccttt tccgcttctt tcgcgttttc gtcgacttca
     6961 tccgccagtt tttcgatgga ctcatcggct ttagcgaccg actggaatgc tttaccgtca
     7021 aactcggtca ggtagttcat catccactcg tcgatgcgat cggagagcag cagcacttcg
     7081 atgcctttct tacgcagcag ctccaggtgc gggctgtttt tcgccgccgc atagctgtct
     7141 gcggtgatgt agtagatttt ttcctgccct tctttcatcc gggagacgta atcttccagc
     7201 gacacggtct gggcggaaga gtcggtatgg gtggaggcaa agcgcaacag tttagcgatc
     7261 gcttcctggt tggcgtgatc ttccgccggg ccttctttca acaccagacc gaactgtttc
     7321 cagaaggttt ggtatttttc cgcgtcgtct ttcgccagtt tttccagcat ttgcagaacg
     7381 cgtttggtca gggcgctgcg cagattacgc gttaccgtgc tgtcctgcag gatttcacgg
     7441 gagacattca acggcaggtc attagaatca atcaggccgc gcacgaaacg cagatagttc
     7501 ggcatgaact gctcggcatc gtccataatg aacacacgct gtacgtacag cttcagacca
     7561 tgtttgtgat cgcggttcca cagatcccac ggcgcctgcg acgggatata cagcaggctg
     7621 gtgtactcct gcttaccttc cacgcggttg tggctccagg tcagcggatc ggtgaaatca
     7681 tgcgcgatgt gcttgtaaaa ctcgttgtac tcgtcgtctt taatttccga cttgttacgg
     7741 gtccacaacg cctgggcctt gttgattttc tcccaggaaa tcacggtttc gccgtctttt
     7801 tcttcccgtt tttcaatctc taccggcaat gcgatgtgat cggaatattt actgataatt
     7861 gagcgtacgc gccagtcatc gaggaattca tcttcgcctt cacgcaggtg taaggtgatt
     7921 tccgtaccac ggtcattttt ggtgatatcg gcaacggtat attcgccttc gcctgccgat
     7981 tcccagaaca cgccattttc cggcttgtcg cctgccgcac gggtacgtac ggtcacttta
     8041 tcggccacaa taaacgcgga gtagaagcct acgccaaact gaccgatgag ctggctatct
     8101 ttcgcctgat cggaccccat tgattcgagg aaagatttgg tgccggactt ggcaatggtg
     8161 cctaagtggt caatcacctc atcacgattc atccccacgc cgttatcggc aatggtcaac
     8221 gtacgcttat ctttatcgaa agagacgcgc acacgcagct cgccatctcc ttcatacagg
     8281 tccgggtttg acagagcgcg gaaacgcagc ttgtccgccg catctgaggc gttagagatg
     8341 agttcacgca ggaagatttc tttattggaa taaagagaat ggatcatcag gtgcagaagc
     8401 tgtttaactt ctgactgaaa accacgcgtt tcttgtcctt tcatgtggat agacctcaac
     8461 aatgccattt ttaatggtaa aaatacgttg agggtgagat ggggacaagc gggtgtgatt
     8521 tcaagcggag gccgcgaacg ccgcctccgt ttgttcagaa aataatctta tgg
//
LOCUS       DAGWFR010000167         8472 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.169, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000167 DAGWFR010000000
VERSION     DAGWFR010000167.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 8472)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8472)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8472
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.169"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            184..1947
                     /locus_tag="MOX77_003791"
                     /pseudo
     CDS             184..1947
                     /locus_tag="MOX77_003791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459238.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="chitinase"
     gene            2023..4164
                     /gene="ldcC"
                     /locus_tag="MOX77_003792"
     CDS             2023..4164
                     /gene="ldcC"
                     /locus_tag="MOX77_003792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine decarboxylase LdcC"
                     /protein_id="HCA3359203.1"
                     /translation="MNIIAIMGPHGVYYKDEPIKELERALQSLGFQIIWPQNSVDLLK
                     FIEHNPRICGVIFDWDEYSLDLCSEINQLNEYLPLYAFINTNSTLDVSVHDMRMALWF
                     FEYALGLAEDIATRIHQYTNEYLDNITPPFTKALFTYAKEGKYTFCTPGHMAGTVYQK
                     SPPGCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYMVTN
                     GTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPLWLKPTRNALGILGGIP
                     KREFTRDSIARKVAETAQAQWPVHAVITNSTYDGLLYNTNWIKQMLDVPSIHFDSAWV
                     PYTHFHPIYQGKSGMSGDRVPGKVIFETQSTHKMLAAFSQASLIHIKGEYDEETFNEA
                     FMMHTSTSPSYPIVASIETAAAMLRGNPGKRLINRSVERALHFRKEVQRLREESDSWF
                     FDIWQPEEVDEAECWPVTPGETWHGFTDADDDHMFLDPVKVTILTPGMDEQGNMSEEG
                     IPAALVAKFLDERGVVVEKTGPYNLLFLFSIGIDKTRAMGLLRGLTEFKRAYDLNLRV
                     KNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIRQHDLPELMLRAFEVLPEMIMTPHQAW
                     QRQIKGEVETVALDQLPGRVSANMILPYPPGVPLLMPGERITQQSRAVLDFLLMLCSI
                     GQHYPGFETDIHGAKRNEDGVYQVRVLKHAC"
     gene            4220..4609
                     /locus_tag="MOX77_003793"
     CDS             4220..4609
                     /locus_tag="MOX77_003793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HCA3359204.1"
                     /translation="MLGLKQVHHIAIIATDYAVSKAFYCDILGFDLLSEAWREERDSW
                     KGDLALNGQYVIELFSFPFPPARPSRPEACGLRHLAFSVENVENAVAHLEKHQVKCEP
                     IRIDPYTGKRFTFFNDPDGLPLELYEQ"
     gene            4672..5964
                     /gene="tilS"
                     /locus_tag="MOX77_003794"
     CDS             4672..5964
                     /gene="tilS"
                     /locus_tag="MOX77_003794"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HCA3359205.1"
                     /translation="MTTLTLNTSLLSSRRILAAFSGGLDSTVLLHQLVLWRERHPDVT
                     LRAIHIHHGLSPHADSWVRHCETVCERWQVPLVVERVTLADNGLGIEAHAREARYRAF
                     AQTLLPGEVLATAQHLDDQCETFLLALKRGSGPAGLSAMGERSPFAGTLLLRPLLRET
                     RKTLEQWAVRHGLCWIEDESNQDDAYDRNFLRLRALPLLQQRWPHFPAAVARSATLCA
                     EQERLLDELLASDLTDCITTEGTLRLSPLMSMSDVRRAAILRRWLAMRNAPMPSRDAL
                     ERIWQEVALARDDASPCLRFGDHEIRRYQSQLWWIKTVAGQHETTVAWPVWQTPLALP
                     AGLGTVQLVPGGELRRPREEESVSIRFKAPGLLHIVGRHGGRKLKKIWQEQGIPPWRR
                     DTTPLLFYGETLIAAAGVFVTREGAAEDKEGVSLVWHA"
     gene            complement(6048..6308)
                     /gene="rof"
                     /locus_tag="MOX77_003795"
     CDS             complement(6048..6308)
                     /gene="rof"
                     /locus_tag="MOX77_003795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rho-binding antiterminator"
                     /protein_id="HCA3359206.1"
                     /translation="MSMNETYQPINCDDYDSLELACMHHLILTLTLKDGEVLQAKAND
                     LILRKNVEYLLAEVSGESCELRLDKIASFSHPEIGTVVVSES"
     gene            complement(6295..6495)
                     /locus_tag="MOX77_003796"
     CDS             complement(6295..6495)
                     /locus_tag="MOX77_003796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012133967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaeP family protein"
                     /protein_id="HCA3359207.1"
                     /translation="MEKYCELVRKRYAEIASGDLGYVPDALGCVLKVLNEVAADSALS
                     ESVREKAAYAAANLLVSDYVNE"
     gene            6693..7238
                     /locus_tag="MOX77_003797"
     CDS             6693..7238
                     /locus_tag="MOX77_003797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaeQ family protein"
                     /protein_id="HCA3359208.1"
                     /translation="MALKATIYKAVVNVADLDRNRFLDAALTLARHPSETQERMMLRL
                     LAWIKYADERLQFTRGLSAEDEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQASDV
                     ALFAYNSRAAQIWWQQHQSKCAQFANLSVWYLDDGQLAQLSEFADRTMTLQATIQDGA
                     IWLSDARNNLEIQLTAWQQPS"
     gene            7235..7657
                     /gene="arfB"
                     /locus_tag="MOX77_003798"
     CDS             7235..7657
                     /gene="arfB"
                     /locus_tag="MOX77_003798"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HCA3359209.1"
                     /translation="MIAISRTVSIADNELEITAIRAQGAGGQHVNKTSSAIHLRFDIR
                     ASGLPEYYKQRLLTASHHLISDDGVIIIKAQEFRSQELNREAAIARLVAVIKELTAEQ
                     KSRRATRPTRASKERRLSSKAQKSSVKALRGKIRRPLD"
     gene            7689..8390
                     /gene="nlpE"
                     /locus_tag="MOX77_003799"
                     /gene_synonym="cutF"
     CDS             7689..8390
                     /gene="nlpE"
                     /locus_tag="MOX77_003799"
                     /gene_synonym="cutF"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006899150.1"
                     /note="NlpE, an outer membrane lipoprotein, interacts
                     directly with CpxA, the sensor histidine kinase of the Cpx
                     system for response to envelope stress; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress response activation lipoprotein
                     NlpE"
                     /protein_id="HCA3359210.1"
                     /translation="MVRTAILSVAAACTLFALIGCNNRAEVDALQPAQAAELKPMQQS
                     WRGVLPCADCEGIETSLFLEKDGTWVMNERYQGVREEPSSFASYGTWARTADKLVLTD
                     SNGEKSYYRAKGNALEMLDREGNPVASQLNYTLVPVTASLPVTPMPLRGMYVYRADAA
                     TFTDCATGKRLPVASNAQLERGYLAAKGEAEKPVLLTVEGHFVFAANPDTGEPVKTLI
                     ADKNVKFAPGKDCTH"
BASE COUNT         1984 a         2136 c         2432 g         1920 t
ORIGIN      
        1 gagccttaca ggcgcatcag aaaaacctcc ggctatgccg gaggatattt attttggacg
       61 aggaaaaatg agacgccgat gagctgatgt gattaaacgc aacggcatgt tctccctgac
      121 actgtagcaa ctgccaggcg tgtggccagg gcaggcagtg aactaccctt caaggagaaa
      181 attatgggat tgcaaaaaac actggcgctc agcgccgtag cggcagggat catgttgagc
      241 ttatccggtg cgcaggccgc gccgctgctt agcagtagtg agccaatgac cattaacgcc
      301 agcgatctgg cggcgaaaga gaaagcgctg acggattttc cgttaatgga ggcagtgaaa
      361 tcctctatcc agacgttgga taacagcgcg gtcgaacaaa tcgaaccggg gcgcgccgct
      421 aacccggcaa acgtaaaacg cgttgaaagt attctgaaag aggccgactg ggattatctg
      481 ttcccgatgc gcgcgccgga atacacttac tctaacttcc tgaaagcgat aggtaaattc
      541 ccggcggttt gtggtaccta caccgatgga cgcgatagcg acgctatctg ccgtaaaacc
      601 ctggctacta tgtttgcgca ttttgcccag gagacgggcg gtcacgaaag ctggcgtgac
      661 attccggaat ggcgtcaggc gctggtctat ctgcgcgaag tcggctgaac agaagggcaa
      721 aaaggcggct acaacggcga atgtaacccg gatgtatggc agggccagac ctggccgtgc
      781 ggtaaagata aggacggcga tttcctcagc tattttggcc gcggggcaaa acagctttct
      841 tataactaca actatgggcc tttctctgac gcgatgtatg gcgacgttcg ccctctgctg
      901 gataaacccg agctggtggc ggatacctgg atgaacctgg cgagcgccgt cttcttcttt
      961 gtgtatccgc agccgccgaa gccgtctatg ctacatgtga ttgacggtac ctggcagcca
     1021 aacgatcgcg ataaagcaaa cggcctggta tcaggtttcg gcgtcactat tcagatcatc
     1081 aatggcggcg tggagtgcgg cggcgcagat gagaatgcgc agtcgcttaa ccgtatcgcc
     1141 tactacaaag agtttgccaa ctacctgaaa gtgccggtgc cggctgacga agtgttgggc
     1201 tgtaaaaaga tgaagcagtt cgatgaaggc ggcgctggcg cgttaccgat ctattgggaa
     1261 caagactggg gctggagcgc cgatactgcg gacggtaaaa cctattcctg ccagttagtt
     1321 ggatatcaga cgccgtatac cgcctttaaa gagggcgact acacgaaatg tgtacagcat
     1381 tatttcaacg ttaatgtcgt cgatgataac ggaaccactg aaccggatgt cacgccaact
     1441 ccggcgccag tgacggatga aaacgtggca ccagtcgcgc gcattgccgg gccggtcggg
     1501 gcggtggaag ccggtagcca ggtttcactc aacgcggaag gatcgaccga cgcgaatggc
     1561 gacaagctca cctatacctg gatgtcgcag gatggcaaaa cgctgagcgg ccaggataaa
     1621 gccgttgtga ttttcaacgc gccggatgtc actcagaaca cccagtatgt ggtgaatctg
     1681 accgttagcg acggtacgct ctccagtaca gcggtttata cgctgaatgt gaaagcgaag
     1741 gccgccgctg cggatgacga agataagacc accagctacc ctgcctggag cagcagccag
     1801 aaatggaatc cgggcgacat cgtcaacagt aatggcgcat tgtaccagtg caaaccgttc
     1861 ccggaaggct catggtgtaa tgttgcgcct gcctactatg agcccggcgt agggattgcc
     1921 tgggccgatg catggaacgc attgtaataa gataaatcct gtcggtgctt tgcatcggca
     1981 ggattgttac tatgcttatc tcaggttttt tcaggagaaa gcatgaacat catcgccatt
     2041 atggggccgc acggggttta ttataaagat gaacccatca aggagcttga gcgtgcatta
     2101 caatccctgg gatttcaaat tatctggccg caaaatagcg ttgacttgtt gaagtttatt
     2161 gaacataacc cgcgcatctg cggcgttatt tttgactggg atgaatacag tctcgacctt
     2221 tgtagcgaaa tcaaccagct aaatgaatac cttcctctct acgcctttat caataccaac
     2281 tccacgctgg acgttagcgt tcacgatatg cgcatggcgc tgtggttttt tgagtatgca
     2341 ttggggctgg ctgaagatat cgcgacgcgc attcatcaat atacaaacga atatctcgat
     2401 aatattacgc cgccgtttac caaagcgctg tttacctacg ccaaagaagg aaaatatacc
     2461 ttttgtacgc cggggcatat ggcgggaacg gtgtatcaga aaagcccgcc aggctgtctg
     2521 ttttatgact tttttggcgg caatacctta aaggccgatg tgtcgatttc ggtgactgaa
     2581 ctgggatcgc tgctggatca caccgggccg catctggaag cggaagagta tatcgcccgt
     2641 acttttggcg ccgagcagag ttatatggtg acgaacggta cgtcgacctc gaataaaatt
     2701 gtcggtatgt atgccgcgcc tgcgggaagt acgctactta ttgatcgtaa ttgccataaa
     2761 tcgctggcgc atttgctgat gatgagcgat gtggtgcctc tctggttgaa gccgacgcgc
     2821 aatgcgctcg gcattctcgg cggtattcct aagcgtgaat ttacccgcga cagcattgcg
     2881 cgtaaggtgg cggaaaccgc gcaggcgcaa tggccggtgc atgcggttat caccaattcg
     2941 acttacgatg gtctgctgta taacactaac tggatcaagc agatgctgga cgttccctcg
     3001 atccattttg attccgcctg ggtaccctat acccatttcc atccgatcta ccaggggaaa
     3061 agcgggatga gcggcgatcg ggtgcccgga aaagtgattt tcgaaacgca atccacccat
     3121 aaaatgctgg cggctttttc gcaggcgtcg cttattcata tcaaagggga atatgacgaa
     3181 gagacgttta acgaagcgtt tatgatgcac acttctacat cgccgagcta tcccattgtc
     3241 gcctctatcg agaccgcggc ggcgatgctg cgcggcaatc cagggaaaag attgattaat
     3301 cgttcggtgg aacgggcgct ccattttcgt aaagaagtac agcggttacg tgaagagtcc
     3361 gatagctggt tctttgatat ctggcagccg gaagaggttg atgaggccga atgctggccg
     3421 gtcacgccgg gagaaacctg gcatggcttc accgatgctg atgacgatca tatgttcctc
     3481 gatccggtta aggtgacaat cctgacgccg gggatggatg aacagggcaa catgagcgaa
     3541 gaggggatac ccgccgcgct ggtggcgaag ttcctcgatg agcgaggcgt ggtggtggaa
     3601 aaaaccgggc cgtataatct gctgtttttg ttcagcatag ggattgataa gacccgtgcg
     3661 atggggctgc tgcgcggact gacggaattt aaacgcgcct acgatcttaa cctgcgcgtc
     3721 aaaaatatgt tgccggatct gtatgcggaa gatccggatt tttatcgcaa tatgcgcatt
     3781 caggatctgg cgcaggggat ccataaactg atccgccagc acgatcttcc ggagctgatg
     3841 ctgcgggcgt tcgaggtttt accggagatg atcatgaccc cgcaccaggc ctggcagcgt
     3901 cagatcaaag gtgaggtgga aaccgtggcg ctcgatcaac tgccagggcg cgtttccgcg
     3961 aatatgatcc tgccttatcc gccaggcgtt ccgctgttga tgcccggcga gaggatcacg
     4021 caacagagtc gggccgtgct cgattttctg ctgatgctct gttcgattgg ccagcattat
     4081 cccggttttg aaacggatat tcacggcgcg aaacggaatg aagacggggt gtaccaggta
     4141 cgagtcttaa aacacgcctg ttagcttgcc tgacgagaat gtgacgagta acgtactgat
     4201 aatcaataaa ggagacgcta tgctgggatt aaaacaggtt catcacatcg cgatcattgc
     4261 gacagactat gcggtgagca aggcgtttta ttgcgatatt ctggggttcg atctgctaag
     4321 cgaagcctgg cgggaagagc gtgactcgtg gaagggcgat ttggcgctaa acgggcagta
     4381 tgtgattgag cttttctctt ttcccttccc tccggcgcgt ccaagccgac ctgaagcctg
     4441 cggtctgcgc catctggctt tcagcgtgga aaatgtggaa aacgccgttg cgcatctgga
     4501 aaagcatcag gttaagtgcg aaccgatacg catcgatccg tataccggga agcgctttac
     4561 ttttttcaac gatccggacg gtttaccgct tgagctgtat gagcagtaag gcttgtcatt
     4621 aagacgctcg ccaggtaacg ttgccgggct aagtcactat aagcatggat catgaccact
     4681 ctcacgttga atacctcgtt actctcttct cgccgtattc tggctgcctt tagcggtggc
     4741 ctggattcta cggtgcttct gcatcaactg gtgttgtggc gagaacgcca tcctgacgtc
     4801 acgctgcgtg ctatccatat tcatcacggt ttaagccctc atgctgatag ctgggtgcgg
     4861 cattgcgaaa ccgtatgcga acgctggcag gttccgctgg tagtggagcg ggtgacgttg
     4921 gcggataatg gcctgggtat cgaggcccat gcgcgtgaag cgcgctaccg ggcgttcgca
     4981 cagacgctat tgcctggcga agtgctggca accgcgcagc accttgacga tcagtgtgaa
     5041 acattcctgc tggcgttaaa gcgcggcagc ggtccggccg gactttccgc gatgggagaa
     5101 cgctcgcctt ttgccggaac tctgcttctt cgcccgctgt tgagagaaac gcggaagacg
     5161 ctggaacagt gggctgtgcg tcatggctta tgctggattg aagatgaaag caatcaggat
     5221 gacgcctacg atcgcaattt tttacgcctg cgcgcgcttc cgctcttaca gcagcgctgg
     5281 ccgcattttc ctgcggcggt agcccgtagc gcgacgctct gcgccgagca agaaaggctg
     5341 ctggacgagc ttctggccag cgatcttacg gactgtatca cgacggaggg aacattgcgg
     5401 ctctctccat taatgtcgat gagcgatgtg cggcgggcgg cgattttgcg tcgctggctg
     5461 gcgatgcgta atgcgccgat gccctctcgc gacgcgctgg aacgtatctg gcaggaggtg
     5521 gcgctggcgc gcgacgatgc ctctccctgt ttacgctttg gcgatcacga gattcgccgt
     5581 tatcagtcgc aactgtggtg gattaaaacc gtagccggac aacacgaaac gacggtcgcc
     5641 tggcccgtct ggcaaacacc gctggcgctg cctgccggct tagggacggt acagctcgtt
     5701 cctggcggcg aactgcgccg accgcgagag gaagaatccg tcagcattcg gtttaaagcg
     5761 ccagggttgc tacacattgt gggacgtcac ggcggacgta aattaaagaa aatctggcag
     5821 gagcagggga tcccgccctg gcgacgagac accacgccgc tgttgtttta cggcgaaacg
     5881 ctgattgcgg ctgcgggtgt ttttgtgacg cgtgagggag cagcagaaga taaagaaggg
     5941 gtgagtctgg tttggcatgc ctgatggcgc tgcgcttatc aggcctacgt atcgcatgga
     6001 acgtaggccg gataaggtgc ttgcaccacc atccggcaac aaaatactca ggattcgcta
     6061 actaccacgg taccaatttc cgggtggctg aaactggcga ttttatcgag acgaagttca
     6121 caagactcgc cggaaacctc ggcaagcaga tactctacgt ttttacgtaa gatcaaatcg
     6181 ttcgcttttg cctgcaaaac ctcgccatct tttaacgtta gcgtcagtat taaatgatgc
     6241 atgcaggcaa gctcaagact atcgtagtca tcgcaattaa tgggttgata cgtttcattc
     6301 attgacataa tcgctcacca gtaagttcgc ggcagcataa gctgcctttt ccctgaccga
     6361 ctctgaaagg gcgctatctg ccgccacttc attaagcact ttcaatacac aacccagcgc
     6421 atccgggaca taccctaagt ctccgctggc gatttccgca taccgcttgc gtactaactc
     6481 acaatatttt tccacatgcc ctcctgtcag cattctgact taaccgtgga tgcaagtcta
     6541 agcctacgaa gttaaatctt gtttagcaag gtgactatac catactcatt tgcgcaatat
     6601 cagcgcctga cgcgagtggg taaaagattc gttaacagcc ttttagcgcg gttttcgcta
     6661 caatgggcgc ctgattcgaa aggagttttc tcatggcgct taaagcgaca atttataaag
     6721 ccgtcgtcaa tgtggctgac cttgatcgca accggtttct ggatgcggca ttgacgctgg
     6781 cgcgtcaccc ttctgaaacg caggagcgca tgatgctgcg cctgttggca tggataaaat
     6841 atgctgatga acggttgcag tttacacgcg ggctcagcgc ggaagatgag ccggaggcct
     6901 ggctgcgcaa cgatcatctg ggcatcgatc tctggataga gctggggctg ccggatgagc
     6961 gccgtattaa gaaagcctgt actcaggcga gcgacgtcgc gctctttgct tataactccc
     7021 gggcggcgca aatctggtgg cagcagcatc aaagcaagtg cgcgcagttc gctaacctgt
     7081 ccgtctggta tctggatgac gggcagctgg cgcagctcag tgaatttgcc gatcgtacca
     7141 tgacgctaca ggcgacgatt caggacggcg caatctggct ttctgatgct cggaataatc
     7201 tggaaataca gctaaccgcc tggcaacagc cctcatgatt gccatctccc ggacggtctc
     7261 catagccgat aatgagctgg aaattacggc cattcgcgcg cagggcgcgg gtggtcagca
     7321 cgtaaataag acctctagcg cgattcattt gcgctttgac attcgggcct ctggcctgcc
     7381 agagtattat aaacagcgtt tgctgacggc cagccaccat ctgataagcg atgatggcgt
     7441 cattatcatt aaggcgcagg agttccggag ccaggagctc aaccgggaag cggctatcgc
     7501 caggctggtt gccgtcataa aagaattaac cgcggagcag aaaagccgtc gcgcaacccg
     7561 tccgacgcgt gcctcgaaag agcgccgctt gtcctcaaag gcgcaaaaat cttctgtaaa
     7621 ggcgcttcgc ggcaaaattc gtcgtccact ggattgacgg gcaggaatag caatttcata
     7681 aggattttat ggtgagaaca gcaatattgt cagtagcggc agcctgtacg ctatttgcat
     7741 tgatagggtg taataaccgt gcggaagttg acgccctgca acctgcgcag gcggcggaat
     7801 taaaacccat gcagcaaagc tggcgcggcg tgctgccctg tgcggattgt gaaggtattg
     7861 aaacgtcact gtttctggaa aaagacggca catgggtgat gaacgagcgc tatcagggcg
     7921 tgcgcgaaga accttcctct tttgcgtcat acggtacctg ggcgcggacg gcggataaac
     7981 tggtgttaac cgacagcaat ggcgagaaat cgtattatcg cgcgaaaggc aatgcgctgg
     8041 agatgctcga cagagaaggc aatccggtgg cttcgcagct taattatacg ctggtgcctg
     8101 ttaccgccag cctgccggta acgccaatgc cgctgcgtgg tatgtatgta tacagggccg
     8161 atgcggcgac ctttaccgat tgcgcgaccg gaaaacggct gccggtcgcc agtaacgccc
     8221 agcttgagcg cggctatctg gcggcgaaag gtgaagcgga aaaaccggtg ctgctgacgg
     8281 tcgaagggca ttttgtgttt gccgcgaatc cggacacggg cgagccggta aaaacgctaa
     8341 tagctgataa aaatgtgaag tttgcgccgg gtaaagattg cactcactaa taaatatcct
     8401 ccggcatagc cggaggtttt tctgatgcgc ctgtaaggct ctcttaccag ccgcgcccta
     8461 acaggcgcat ac
//
LOCUS       DAGWFR010000168         8291 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.170, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000168 DAGWFR010000000
VERSION     DAGWFR010000168.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 8291)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8291)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8291
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.170"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..2365)
                     /gene="rne"
                     /locus_tag="MOX77_003800"
     CDS             complement(<1..2365)
                     /gene="rne"
                     /locus_tag="MOX77_003800"
                     /EC_number="3.1.26.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E"
                     /protein_id="HCA3359211.1"
                     /translation="MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKG
                     KITRIEPSLEAAFVDYGAERHGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIV
                     QIDKEERGNKGAALTTFISLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLEL
                     PEGMGLIVRTAGVGKSAEALQWDLSFRLKHWEAIQKAAESRPAPFLIHQESNVIVRAF
                     RDYLRQDIGEILIDNPKVMEMARQHIAALGRPDFSSKIKLYTGEIPLFSHYQIESQIE
                     SAFQREVRLPSGGSIVIDSTEALTAIDINSARATRGGDIEETAFNTNLEAADEIARQL
                     RLRDLGGLIVIDFIDMTPVRHQRAVENRLREAVRQDRARIQISHISRFGLLEMSRQRL
                     SPSLGESSHHVCPRCSGTGTVRDNESLSLSILRLIEEEALKENTQEVHAIVPVPIASY
                     LLNEKRTAVNAIETRQDGVRCVIVPNDQMETPHYSVLRVRKGEETPTLSYMLPKLHEE
                     AMALPSEEEYAERKRPEQPALATFAMPDVPPAPTPVEPAVSVATAKKDNVAAEQPAQP
                     GLFSRFLNALKQLFSGEETKTVETAAPKAEEKAERQQDRRKPRQNNRRDRNERRDTRD
                     NRARRDGGESRDDNRRNRRQAQQQNAEARDTRQQETAEKVKTGDEQQQTPRRERSRRR
                     NDDKRQAQQEVKALNREEQPVQETEQEERVQQVQPRRKQRQLNQKVRFTNSTVVETVD
                     TPVVVDEPRPVENVEQPVPAPRTELAKVDLPVVADIAPEQDDSVEPRD"
     gene            2939..3898
                     /gene="rluC"
                     /locus_tag="MOX77_003801"
     CDS             2939..3898
                     /gene="rluC"
                     /locus_tag="MOX77_003801"
                     /EC_number="5.4.99.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000846318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(955/2504/2580) synthase
                     RluC"
                     /protein_id="HCA3359212.1"
                     /translation="MKTETPSVKIVAIAADEAGQRIDNFLRTQLKGVPKSMIYRILRK
                     GEVRVNKKRIKPEYKLESGDEVRIPPVRVAEREEEAVSPHLQKVAALADVILYEDDHI
                     LVLNKPSGTAVHGGSGLSFGVIEGLRALRPEARFLELVHRLDRDTSGVLLVAKKRSAL
                     RSLHEQLREKGMQKDYLALVRGQWQSHVKTVQAPLLKNILQSGERIVRVSQEGKPSET
                     RFKVEERYAFATLVRCSPVTGRTHQIRVHTQYAGHPIAFDDRYGDREFDQQLTEAGTG
                     LKRLFLHAAALKFTHPGTGDVMRIEAPMDKQLKRCLEVLRSKA"
     gene            complement(3981..4565)
                     /gene="maf"
                     /locus_tag="MOX77_003802"
     CDS             complement(3981..4565)
                     /gene="maf"
                     /locus_tag="MOX77_003802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003836743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation inhibitor Maf"
                     /protein_id="HCA3359213.1"
                     /translation="MPRLILASTSPWRRALLEKLTIPFECAAPDVDETPMPGEAPRQL
                     VLRLAQAKAQSLAARFPNHLIIGSDQICVLDGEITGKPLTEEKARQQLAKASGSIVTF
                     YTGLALYNSASGHLQTEVEPFDVHFRHLSEAEIDDYVRKEHPLHCAGSFKSEGLGIAL
                     FERLEGRDPNTLIGLPLIALCQMLRREEMNPLNA"
     gene            4763..5284
                     /gene="yceD"
                     /locus_tag="MOX77_003803"
     CDS             4763..5284
                     /gene="yceD"
                     /locus_tag="MOX77_003803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001174481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA accumulation protein YceD"
                     /protein_id="HCA3359214.1"
                     /translation="MQKVKLPLTLDPVRTAQKRLDYQGIYTPDQVERVAESVVSVDSD
                     VECSMSFAIDNQRLAVLTGDAVVTVSLECQRCGKPFTHQVHTTYCFSPVRSDEQAEAL
                     PEAYEPIEVNEFGEIDLLATVEDEIILALPVVPVHDSEHCEVSEADMVFGELPDEAQK
                     PNPFAVLASLKRK"
     gene            5336..5509
                     /gene="rpmF"
                     /locus_tag="MOX77_003804"
     CDS             5336..5509
                     /gene="rpmF"
                     /locus_tag="MOX77_003804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005125993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HCA3359215.1"
                     /translation="MAVQQNKPTRSKRGMRRSHDALTAVTSLSVDKTSGEKHLRHHIT
                     ADGYYRGRKVIAK"
     gene            5643..6722
                     /gene="plsX"
                     /locus_tag="MOX77_003805"
     CDS             5643..6722
                     /gene="plsX"
                     /locus_tag="MOX77_003805"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HCA3359216.1"
                     /translation="MTRLTLALDVMGGDFGPSVTVPAALQALNANSQLTLLLVGNPDI
                     ITPLLAKADFEQRSRLQIIPAQSVIASDARPSQAIRASRGTSMRVALELVKEGRAEAC
                     VSAGNTGALMGLAKLLLKPLEGIERPALVTVLPHQQKGKTVVLDLGANVDCDSTMLVQ
                     FAVMGAVLAEEVVGIKNPRVALLNIGEEETKGLDSIREASLMLKTVPTINYIGYLEAN
                     ELLTGKTDVLVCDGFTGNVTLKTMEGVVRMFLSLLKSQGEGKKRSWWLLLLKRWLQKS
                     LTRRFSHLNPDQYNGACLLGLRGTVIKSHGAANQRAFAVAIEQAVQAVQRQVPQRIAA
                     RLESVYPAGFEPLDDGKGVNLRAHR"
     gene            6802..7755
                     /gene="fabH"
                     /locus_tag="MOX77_003806"
     CDS             6802..7755
                     /gene="fabH"
                     /locus_tag="MOX77_003806"
                     /EC_number="2.3.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HCA3359217.1"
                     /translation="MYTKIIGTGSYLPEQVRTNADLEKMVETSDEWIVTRTGIRERHI
                     AAPNETVATMGFTAANRAIEMAGIDKDQIGLIVVATTSATHAFPSAACQIQSMLGIKG
                     CPAFDVAAACAGFTYALSIADQYVKSGVVKHALVVGSDVLARTCDPGDRGTIIIFGDG
                     AGAAVLSASEEPGIISTHLHADGRYGELLTLPNADRVNPDNPIYLTMAGNEVFKVAVT
                     ELAHIVDETLAANNLDRSELDWLVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTS
                     AASVPCALDEAVRDGRIKAGQLVLLEAFGGGFTWGSALIRF"
     gene            7771..>8291
                     /gene="fabD"
                     /locus_tag="MOX77_003807"
     CDS             7771..>8291
                     /gene="fabD"
                     /locus_tag="MOX77_003807"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HCA3359218.1"
                     /translation="MTQFAFVFPGQGSQSVGMLAEMAANYPIVEETFAEASAALGYDL
                     WALTQQGPAEELNKTWQTQPALLTASVALWRVWQQQGGKMPALMAGHSLGEYSALVCA
                     GVINFADAVRLVEMRGKFMQEAVPEGTGGMSAIIGLDDASIAKACEESAEGQVVSPVN
                     FNSPGQVVIAGHK"
BASE COUNT         1829 a         2167 c         2316 g         1979 t
ORIGIN      
        1 tatcgcgagg ttctacgcta tcatcctgct ccggcgcgat atcggcaacg acaggtaaat
       61 caactttcgc cagctcggta cgcggcgctg gaacgggctg ttcaacgttt tcaaccgggc
      121 gtggttcgtc gacgacgacc ggcgtgtcaa ccgtttcaac cactgtgctg ttggtaaagc
      181 ggactttctg attaagctga cgttgcttac ggcgcggctg aacctgctga acgcgttctt
      241 cctgctcggt ctcctggaca ggctgttctt cgcggttaag cgcttttact tcctgctgcg
      301 cctggcgttt gtcatcattg cggcggcggc tgcgttcgcg acgcggcgtc tgttgctgct
      361 catcgccggt tttcactttt tccgccgttt cctgctggcg ggtatcgcgc gcttccgcat
      421 tttgctgctg cgcctggcga cggttacgac gattatcgtc gcggctctcg ccgccgtcac
      481 gtctggcacg gttatcacgg gtgtcgcggc gttcgttacg atcgcgacgg ttgttctgtc
      541 gtggcttgcg acgatcctgc tgacgctccg ctttttcttc cgctttcggc gcggctgttt
      601 cgacggtttt cgtttcttca ccgctgaaca gttgtttcag cgcgttaagg aagcggctaa
      661 acagacccgg ctgggcaggc tgctcggcgg caacattatc ctttttcgcc gtggcaacgc
      721 taaccgccgg ttcgacaggc gtcggcgccg gaggcacatc tggcatagcg aatgtcgcca
      781 gcgcaggctg ttccgggcgt ttacgctcgg cgtactcttc ttcagaaggc agcgccatcg
      841 cttcttcgtg cagcttcggc agcatgtagc tcagggtcgg cgtttcttcc cctttgcgta
      901 cgcgtagcac ggaatagtgc ggcgtttcca tctgatcgtt cgggacgatg acacagcgga
      961 cgccatcctg acgcgtctca atagcgttaa ctgccgtccg tttttcgtta agcagataag
     1021 aggcgatcgg caccggaaca atggcatgga cttcctgcgt attctctttc agcgcttctt
     1081 cttcaatcag gcgcagaatg gacagcgaca gagattcgtt atcgcgcacg gtgccggtac
     1141 cgctacagcg cggacacacg tgatggctgg attcgcccag cgacgggctc aggcgctgac
     1201 gcgacatttc gagcaggccg aagcgggaaa tatggctaat ctgaatacgc gcccggtcct
     1261 gacgcaccgc ttcacgcagg cggttttcta ccgcgcgctg gtgacgtacc ggcgtcatat
     1321 cgataaagtc gataacgatt aggccgccca ggtcgcgcag acgcaactgg cgggcaatct
     1381 catcggccgc ttcgagattg gtgttgaacg cggtttcttc gatatcgccg ccgcgagttg
     1441 cgcgggcgga gttgatatcg atagcggtta acgcttcggt gctgtcaatg acgatggagc
     1501 cgccggaggg caggcgcact tcacgctgga acgcagactc gatctgcgat tcgatctggt
     1561 aatggctgaa caacgggatt tcaccggtgt atagcttaat tttgctgcta aaatccgggc
     1621 ggcccaacgc ggcgatatgc tgacgcgcca tttccatcac ttttggattg tcgattagga
     1681 tttcaccgat atcctgacgc agatagtcgc gaaacgcgcg tacgatgacg ttgctttcct
     1741 gatggatcag gaacggcgcg ggacggcttt cagcggcttt ctgaatggct tcccagtgtt
     1801 tcaggcggaa gcttaaatcc cactgcaacg cttcggcgga tttacccacg cccgcggtac
     1861 gtacgataag ccccatccct tcaggaagtt ccaggctggc caacgcttct tttaactcgg
     1921 tacgatcgtc gccttcaatg cgacgggaga taccacccgc gcgcgggtta ttcggcatca
     1981 gtaccaggta gctgcccgcc agactgataa aggtggttaa cgccgcgcct ttgttgccgc
     2041 gctcttcttt atcgatttga acaatgactt cctggccttc gcgtaacacg tctttgatgt
     2101 tcgggcgacc atgagcgctg tagttagcgg ggaaatattc gcgggcaatt tcttttaacg
     2161 ggaggaaacc gtggcgttct gcgccgtaat caacaaaagc cgcttccagg ctcggttcaa
     2221 tacgggtaat tttgccttta tagatgttcg cttttttctg ctcgtgtccg gggctttcta
     2281 tatccagatc gtacagacgc tgcccatcta caagggcgac gcgcaactct tcctgctgag
     2341 tcgcgttgat taacattctt ttcatcgtaa cttactcatt attcttacgt tgacgactaa
     2401 gctgcgggca tggtgacgcc ttaccgggca tgaaccgatg gcctcgtgac tatttcgcgt
     2461 cgccaacctc acggttatcg tcagctcaaa gaggcgcaga gtgtcggttg cctgtatttc
     2521 atacggaaac acagcgcaat tatcagggaa gcagcctggg cattactctc cagagaagat
     2581 cctatctacc ggtaaggact gcaacccgca gcccgctaac tgtctgaaaa atcaatacgt
     2641 cttacgccat tgctgcgttg atgatcggtc agacaaaatg ggttattccg ctaaactttt
     2701 tgttttaaca agtttcggtg cggaaaccgc atcattattc cactgctaac cttgttatag
     2761 caagatgact tttaccattt atcacccgct tactcacagt tttttcacca gcgcgagcca
     2821 atcgctttaa taaccagcaa aaccgcagtg aaaaatgttc atccactggc gtagacgtct
     2881 ctataagcat agaaaaatgt gtggcgcgaa tctcacaggc tatttagaat cgccccccat
     2941 gaaaacagaa acgccatccg taaaaattgt tgctatcgcc gctgacgaag cggggcaacg
     3001 cattgataac tttttgcgca cccaactgaa aggggtacca aaaagtatga tttatcgcat
     3061 cttgcgtaaa ggcgaggtgc gggtgaacaa aaaacgcatt aaaccggaat acaaactgga
     3121 atcgggcgat gaagtccgca ttccgccggt tcgcgttgct gagcgcgaag aagaggctgt
     3181 gtcgccgcat ttgcaaaaag tggcggcgtt ggcggacgtc attttgtatg aagacgacca
     3241 tattctggtg ctgaataagc cttccggcac cgccgtacac ggtgggagcg ggttaagttt
     3301 cggcgtcatc gaagggctgc gggcgttgcg tccggaagcg cgattcctgg aactggtgca
     3361 tcgtcttgac cgcgatactt ccggcgtgct gttggtggcg aaaaaacgct ccgcgctgcg
     3421 ttcgctgcat gagcaactgc gcgaaaaggg aatgcagaaa gattatctgg cgctggtgcg
     3481 cggccagtgg caatcacacg ttaaaaccgt acaggcgcca ttattaaaga acattctgca
     3541 aagcggcgaa cgcattgtcc gcgtgagcca ggaaggcaaa ccttcagaaa cgcgcttcaa
     3601 ggtggaagag cgttatgcct tcgccacgct ggtgcgctgt agcccggtca cgggccgtac
     3661 gcatcagatt cgcgtacata cccaatatgc cggtcaccct attgcgttcg acgatcgcta
     3721 cggcgaccgt gagtttgatc aacagcttac cgaagcggga accggtctta aacgtctctt
     3781 tctgcacgcc gcggcgctga agttcacgca tccgggaacg ggcgatgtca tgcgcattga
     3841 agcgccaatg gataagcaat tgaagcgctg ccttgaggta ttacgtagta aagcctgatg
     3901 cgcgttgctt atcaggccta caatcgtgtg atgcaccgta ggcctgataa gacgcatcgc
     3961 gtcgccatca ggcagattaa tcaggcattc agcgggttca tctcttcccg tcgcagcatc
     4021 tggcacaggg caataagcgg caagccgatc agcgtgttcg gatcgcggcc ctctaagcgc
     4081 tcaaataatg caatgcctaa accttcgctt ttaaaacttc ccgcgcagtg cagcggatgc
     4141 tctttacgga catagtcgtc tatttccgct tcgcttaaat ggcgaaagtg aacgtcaaaa
     4201 ggctccactt cggtttgtaa gtgcccggag gcggagttat acagtgccag tccggtataa
     4261 aacgtcacaa tacttccgct ggctttggct aattgctgac gcgctttttc ttccgtcagc
     4321 ggtttgccgg tgatttcgcc gtccagaaca caaatttggt cggagccaat aatcaaatga
     4381 ttcgggaaac gcgcggcgag cgattgcgcc ttagcctgcg ccagccgcag caccaactga
     4441 cgcggcgctt cgcccggcat gggggtttca tcaacatccg gcgcggcgca ttcgaaagga
     4501 atcgtcagct tttccagcag cgcgcgacgc cagggagagg tagacgcaag gatgagacgg
     4561 ggcatatttt ttccctcaga tatagcgtaa tgatgagagc catcttaaac tatgctcttc
     4621 ggtcttcaag cctgtcatac tgactcgtct tgagcgaaaa taagtctgta acccgcaatg
     4681 tgtgcgaatt attggcaaaa ggcaaccgca ggctgccttt ttctttgact atatgacgtt
     4741 acgaagttaa tatgcgcgcc ctatgcaaaa ggtaaaatta cccctgactc ttgatccggt
     4801 tcgtaccgct caaaaacgcc ttgattacca gggtatctat acccccgatc aggttgagcg
     4861 cgttgccgaa tctgtagtca gtgtggacag tgatgtggaa tgctccatgt cgttcgctat
     4921 cgataaccag cgtctcgccg ttttgactgg cgatgcggtc gttacggtgt cgctcgaatg
     4981 ccagcgttgc gggaaaccgt ttacccatca ggttcacaca acgtattgtt ttagccctgt
     5041 ccgttccgac gagcaggctg aagcactgcc ggaagcgtat gagccgattg aggtaaacga
     5101 attcggcgaa atcgatctgc tggcgacggt tgaagatgaa atcatcctcg ccttgccggt
     5161 agttccggtg catgattctg aacactgtga agtgtccgag gcggacatgg tctttggcga
     5221 actgcctgat gaagcgcaaa agccaaaccc atttgccgta ttagccagct taaagcgtaa
     5281 gtaataggtc ttccccgcgg acgcagggat aaaccgtaat tgaggagtaa ggtccatggc
     5341 cgtacaacag aataaaccaa cccgttccaa acgtggcatg cgtcgttccc atgacgctct
     5401 gaccgcagtc accagcctgt ctgtagacaa aacttctggt gaaaaacacc tgcgtcacca
     5461 catcactgcc gacggttact accgcggccg taaggtcatc gctaagtaat cgcgcgatac
     5521 tcgatgcctt ttgcatcaca ggcgtgcctg tggtgtaaaa gccgaagagt acaagcgtga
     5581 taaagcttag tgaggatttc tccgcgtaag cggagaacac cgaaccaggc agcgacgata
     5641 ccttgacacg tctaaccctg gcgttagatg tcatgggggg cgattttggt ccttccgtga
     5701 cggtgcctgc agcattgcag gcactgaacg ctaattcgca gctcactctt cttttagtcg
     5761 ggaatcccga tattatcacg ccattacttg ccaaagctga ctttgaacaa cgttcgcgtc
     5821 tgcagattat ccctgcacag tcagttattg ccagtgatgc ccggccttcg caggcgatcc
     5881 gcgccagtcg cgggacatcc atgcgtgtgg ccttggagct tgtgaaagaa ggccgagccg
     5941 aagcttgcgt tagcgccggt aataccgggg cgctgatggg gctggcgaaa ttattgctca
     6001 agcctcttga ggggattgag cgtccggcgt tggtgacggt attaccgcac cagcaaaagg
     6061 gcaaaacggt agtgcttgat ttgggggcca acgtcgattg cgacagtacc atgctggtgc
     6121 agtttgccgt gatgggcgcc gttttggcgg aagaggtcgt cgggatcaaa aatccccgcg
     6181 tggcgctact caatatcggg gaagaagaaa ccaaaggcct cgacagtatt cgcgaagcct
     6241 ctttaatgtt aaaaacagtc ccaaccatca attacatcgg ctaccttgag gcgaatgagt
     6301 tactgacggg aaaaaccgat gtactggtgt gtgacggctt tacaggcaat gtcacgctta
     6361 aaacgatgga gggggttgtc agaatgttcc tttcactgct gaaatcacag ggcgagggga
     6421 aaaaacggtc gtggtggctg ctgttattaa aacgttggtt acaaaaaagc ctgacgaggc
     6481 gattcagtca cctcaacccc gaccagtata atggcgcctg tctgttagga ttgcgcggca
     6541 cggtgataaa aagtcatggt gcggccaatc agcgagcatt tgcagtcgcg attgaacagg
     6601 cagtgcaggc ggtgcagcga caagttcctc agcgaattgc cgctcgcctg gaatctgtat
     6661 acccagccgg atttgaaccg ctggacgatg gcaaaggcgt aaacctgcgg gcgcacagat
     6721 aatatcgctg tctccccggc gccgccagcg tgccagacgt ttacaggtaa cggtatataa
     6781 ccgaaaagtg actgagcgta catgtatacg aagattattg gtactggcag ctatctgccc
     6841 gaacaagtgc ggactaacgc cgatttggaa aaaatggttg agacctctga cgagtggatt
     6901 gtcactcgta caggtattcg tgaacgccat atcgccgcgc cgaatgaaac tgtcgcgacg
     6961 atgggcttta ccgctgcgaa tcgcgcgatt gagatggcgg ggatcgataa agaccaaatt
     7021 ggcttgattg tggtagcgac cacatcagca acgcatgcat ttccaagcgc ggcatgtcag
     7081 attcaaagta tgctcggtat taaaggttgc ccggcgtttg atgtcgcggc agcgtgcgca
     7141 ggtttcacct acgcgttaag tatcgccgac cagtacgtta aatccggcgt ggttaaacac
     7201 gcgctggtgg tcggttccga tgtattagcc cgcacttgcg atcctggcga tcgcggtacg
     7261 atcattattt tcggcgatgg cgcaggcgcg gccgtactga gcgcttctga agaaccgggt
     7321 attatctcca ctcatcttca tgccgatggc cgttacggtg aattactgac cctgccgaat
     7381 gccgatcgtg taaatccgga taacccgatt tacctgacga tggcgggtaa tgaagtcttt
     7441 aaagtggcgg tcactgaact ggcgcatatt gtcgatgaga cgctggcggc taataacctg
     7501 gatcgctcag aactcgattg gctggtgccg catcaggcta acctgcgtat cattagcgcg
     7561 acagcgaaaa aactcggcat gtcgatggac aatgtcgtcg tcacgctgga caggcacggc
     7621 aatacctccg cggcttctgt gccgtgcgcg ctggatgaag ccgtgcgtga cgggcgaatt
     7681 aaagccggtc agctggtatt gcttgaagcc ttcgggggtg gattcacctg gggctccgcg
     7741 ctgattcgtt tctagtataa ggatttaaac atgacgcaat ttgcatttgt gttccccggt
     7801 cagggttctc agagcgttgg gatgttggcc gagatggcgg caaattaccc tatcgtagaa
     7861 gaaacgtttg ctgaagcttc tgcggctctg ggatatgatc tgtgggcgct cacccagcaa
     7921 ggtccagcgg aagaactgaa taaaacttgg cagacgcagc cggcgctatt aaccgcttcc
     7981 gtcgcgcttt ggcgcgtttg gcagcagcag ggcggtaaaa tgcctgcgtt aatggcaggt
     8041 cacagcctgg gcgaatattc cgcgctggtt tgcgctggcg tcatcaactt tgctgatgcc
     8101 gttcgtctgg tggaaatgcg cggtaaattc atgcaggaag cggttccgga aggtactggc
     8161 ggcatgtctg cgatcatcgg tctggatgat gcctctattg ctaaagcctg tgaagaatct
     8221 gccgaagggc aggttgtttc gccggttaac tttaactcgc cgggacaggt ggttatcgcc
     8281 gggcataaag a
//
LOCUS       DAGWFR010000169         8267 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.171, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000169 DAGWFR010000000
VERSION     DAGWFR010000169.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 8267)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8267)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8267
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.171"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..202
                     /locus_tag="MOX77_003808"
     CDS             <1..202
                     /locus_tag="MOX77_003808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HCA3359219.1"
                     /translation="TDSRLNQRGQQLVGRRFMLDAALVNGRGHMRVGDSSWPVCADED
                     LRAGTHVEVIAVEGITLRIRAV"
     gene            complement(203..619)
                     /gene="cueR"
                     /locus_tag="MOX77_003809"
     CDS             complement(203..619)
                     /gene="cueR"
                     /locus_tag="MOX77_003809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cu(I)-responsive transcriptional regulator"
                     /protein_id="HCA3359220.1"
                     /translation="MNISDVAKKTGLTSKAIRFYEEKGLVTPPLRSENGYRTYTQKHL
                     NELTLLRQARQVGFNLEECGELVNLFNDPRRHSADVKKRTLEKVAEIERHISELQSMR
                     DQLLAMAESCPGDDSADCPIIDNLSGCCHHKAQKLR"
     gene            729..3230
                     /gene="copA"
                     /locus_tag="MOX77_003810"
     CDS             729..3230
                     /gene="copA"
                     /locus_tag="MOX77_003810"
                     /EC_number="7.2.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-exporting P-type ATPase CopA"
                     /protein_id="HCA3359221.1"
                     /translation="MSQTIDLTLDGLSCGHCVKRVKESLEQRPDVELADVTVTEAHVT
                     GTASADALIETIKQAGYGATLSHPKAKPLTESSIPSEALAAVPHELPVATADEESQQL
                     LLSGMSCASCVTRVQHALQSVPGVTQARVNLAERTALVMGSASAADLVQAVEKAGYGA
                     EAIEDDIKRRERQQETAIATMKRFRWQAIVALAVGIPVMVWGMIGDNMMVTGDNRSLW
                     LAIGLITLAVMVFAGGHFYRNAWKSLLNGTATMDTLVALGTGVAWLYSMSVNLWPQWF
                     PMEARHLYYEASAVIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTEDGEKS
                     VPLADVQPGMLLRLTTGDRVPVDGEITQGEAWLDEAMLTGEPIPQQKGEGDSVHAGTV
                     VQDGSILFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVAIALFS
                     AAIWYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDAD
                     ALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGVDEAQALRLAAALEQGSSHPLAHA
                     ILEKAGDDKLPQVNGFRTLRGLGVSGEAEGHQLLLGNQALLNEQHVATDDMTAEITAQ
                     ASQGSTPVLLAIDGKAAALLAVRDPLRSDSIAALERLHNAGYRLVMLTGDNPTTANAI
                     AKEAGIDEVIAGVLPDGKADAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGS
                     DVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSIGIPVAAGILWPF
                     TGTLLNPVVAGAAMALSSITVVSNANRLLRFKPKA"
     gene            3584..4420
                     /locus_tag="MOX77_003811"
     CDS             3584..4420
                     /locus_tag="MOX77_003811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000488538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1311 domain-containing protein"
                     /protein_id="HCA3359222.1"
                     /translation="MFRKAVTLLFLLSPAVSYAGLFDSTPELKCGNDNAVTAAKEWIY
                     NEALGRLQQDYIKEPSTLFFDIPQTQYEQQLRAIPVQFSDVITQNPQPENANLRTCSA
                     TVAMSIPQPLFKLMKDLPNTLFYISQGDGQVINNTVTWKQVNYNIQLADNNKDIVVTP
                     VQKTDKLARSIYVMARMTVSGDSIIKKKNNSLIEIAAKKFESRDRELNQVWNSLPTSA
                     RTALKQEQRVWVTKKEQQCGKLSDAKSEDIPAEKRISIYKCQLEMTIARTTYLDGSEL
                     PD"
     gene            4497..5291
                     /locus_tag="MOX77_003812"
     CDS             4497..5291
                     /locus_tag="MOX77_003812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraB/GumN family protein"
                     /protein_id="HCA3359223.1"
                     /translation="MELLNQLKRLCRALRGTPNSWPAIDLSLPGGRHLHLVGSIHMGT
                     RDIAPLPAKLVKKLRQADALVVEADISGNETPFSNLPKCPPLVERLSAGLLNTLEKRV
                     SELGMPLIHFDNQPLWQIAMVLQATQAQRLGLRPDYGIDYQLLQAAREMSLPVQELEG
                     AKHQLELLCDLPDGGMALLDDTLTHWHTNARLLQVMIGWWLEQPPTSIGASLPRTFSQ
                     PLYDVLMVKRNEAWRDALLALPPGRYVVAVGALHLYGEGNLPQILK"
     gene            5492..5971
                     /gene="ybaK"
                     /locus_tag="MOX77_003813"
     CDS             5492..5971
                     /gene="ybaK"
                     /locus_tag="MOX77_003813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006818871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK"
                     /protein_id="HCA3359224.1"
                     /translation="MTPAVKLLEKNKIPFNIHTYDHDPNETNFGDEVVRKLGLNADQV
                     YKTLLVAVNGDMKQLAVAVTPVAGQLDLKKVAKALGAKKVDMADPMVAQRTTGYLVGG
                     ISPLGQKKRLPTLIDAPARTFATIYVSGGKRGLDIELAADDLAAILSAKFADIARRD"
     gene            complement(6088..7739)
                     /locus_tag="MOX77_003814"
                     /pseudo
     CDS             complement(6088..7739)
                     /locus_tag="MOX77_003814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459489.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-sugar
                     hydrolase/5'-nucleotidase"
     gene            7912..>8267
                     /locus_tag="MOX77_003815"
     CDS             7912..>8267
                     /locus_tag="MOX77_003815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3359225.1"
                     /translation="MAMSEPTQPLAGAPAAAAKARTSFGILGAISLSHLLNDMIQSLI
                     LAIYPLLQAEFSLTFVQIGLITLTFQLASSLLQPVVGYWTDKYPMPWSLPVGMCFTLS
                     GLVLLAMAGSFGGVLLA"
BASE COUNT         1965 a         2230 c         2146 g         1926 t
ORIGIN      
        1 gaccgacagc cgccttaacc aacgcggaca acaactggta ggccgccggt ttatgcttga
       61 tgccgcgtta gtgaacggac ggggtcatat gcgtgtcggt gacagctcgt ggccggtatg
      121 cgctgacgaa gacctgcgcg caggtacgca tgtcgaagtg atcgccgtgg aaggcatcac
      181 cctacgcatt cgcgccgttt aatcaacgta acttttgcgc cttgtgatga cagcagccgg
      241 aaagattatc aataatcggg cagtcggcgc tgtcatcgcc gggacaactc tccgccatcg
      301 ccaacagttg atcgcgcatt gattgcagct cgctgatatg gcgttcgatc tccgcgacct
      361 tttccagcgt ccgctttttc acatctgcgc tatggcgtcg cggatcgtta aacagattga
      421 ccagttcgcc acactcttcc agattaaacc ccacctgcct cgcctgtcgc agcaacgtca
      481 gctcgtttaa atgcttctgc gtgtaggtgc gataaccatt ttcgctacgt aatggcggcg
      541 tcaccagccc tttctcttca taaaaccgaa tggctttgct ggttaaaccg gtttttttcg
      601 ccacatcgct aatattcata tttccccctt gaccttaacc ttgctggaag gtttaacctt
      661 tatcacagtg agtcactacg attactaatg tcaatgaatt gatgaccaat cataaaggag
      721 tttttactat gtctcaaact atcgacctga ccctggacgg tttgtcctgc ggtcattgcg
      781 ttaaacgcgt gaaagaaagt cttgaacaac gtccggatgt tgagctggcg gacgttaccg
      841 taaccgaagc gcacgttacc ggtaccgcca gtgcggacgc gttaattgaa accatcaaac
      901 aagccgggta tggcgcgacg ttaagccacc caaaggctaa accgctgacg gagtcatcaa
      961 tcccgtcgga agcactggca gcggttcctc atgagcttcc ggtagcgacg gccgatgaag
     1021 aaagccaaca gttgctgtta agcggcatga gctgcgccag ttgtgtcacc cgcgtacaac
     1081 atgcgctaca aagcgtaccg ggcgtcacgc aggcacgggt aaacctggcg gaacgcactg
     1141 cgctggtgat gggcagcgcg tccgccgctg atttagtgca ggcggtggaa aaagccggct
     1201 acggcgcaga ggcgattgaa gatgacatca aacgccgcga gcgccagcag gaaaccgcca
     1261 tcgccaccat gaaacgtttt cgctggcagg ccatcgtcgc cctggcggtc ggtataccgg
     1321 tcatggtctg ggggatgatc ggcgataaca tgatggtgac cggcgacaac cgcagcctgt
     1381 ggctggctat tggcctgatc acgcttgcgg tgatggtttt tgcgggcggt cacttttacc
     1441 gtaacgcgtg gaaaagcctg ctgaacggca cggcgacgat ggatacgctg gtggcgctcg
     1501 gcaccggggt cgcctggctc tactccatga gcgtcaacct gtggccgcag tggttcccga
     1561 tggaagcacg gcacctctat tacgaagcca gcgcggtgat tatcggtctg attaatctcg
     1621 gacacatgct ggaagcgcgc gcccgtcagc gttcctcaaa agcgctggaa aaattactcg
     1681 atctcacccc gcccaccgca cgcgtcgtaa cagaagacgg cgaaaaaagc gtcccgctgg
     1741 cggacgttca gccagggatg ctgctgcggc tcactaccgg cgatcgcgtg ccggtggatg
     1801 gcgaaattac ccagggcgaa gcgtggcttg atgaagccat gctgaccggc gaacctattc
     1861 cgcagcaaaa aggcgaaggc gacagcgttc atgccggcac cgtcgtccag gacggcagca
     1921 tcctgttccg cgccagcgcg gtgggcagtc ataccacgct gtcacgcatt attcgcatgg
     1981 tacgccaggc gcagagcagt aaaccggaaa ttggccaact ggccgataaa atctccgcgg
     2041 tattcgttcc cgtagtggtg gccattgcgc tgttcagcgc cgctatctgg tatttcttcg
     2101 ggccggcacc gcaaattgtt tatacgctgg tcatcgccac caccgtactg attatcgcct
     2161 gcccttgcgc attaggcctg gcgacgccaa tgtcgattat ttccggcgta ggccgcgcgg
     2221 ccgaattcgg cgtgctggta cgcgacgccg atgccctgca acgcgccagt acgttggata
     2281 ccctcgtttt tgataaaacc gggacgctga cggaaggcaa gccgcaagtg gtggcggtaa
     2341 aaacctttaa cggcgttgat gaagctcagg cattacgtct ggcagccgcg ctcgaacaag
     2401 gctccagcca cccgctggcc catgcgattc tggaaaaagc cggcgatgat aaactgccgc
     2461 aggtgaacgg tttcagaacg ctgcgcggac tgggcgtcag cggtgaagcg gaaggtcatc
     2521 aactgcttct ggggaaccag gcgttactga acgaacagca cgtcgccacg gatgatatga
     2581 cggcggaaat caccgcgcag gcctcgcaag gctcgactcc agtcctgctg gcgattgacg
     2641 gtaaagcggc ggcgttactg gcggtacgcg atccattgcg cagcgatagt attgccgcac
     2701 ttgaacgcct gcacaatgcc ggataccgtc tggtaatgct caccggggat aacccaacga
     2761 cggctaacgc gattgccaaa gaagcgggta ttgatgaagt gattgcgggc gttctgccgg
     2821 atggcaaagc cgatgcgatt aaacgcctgc aaagccaggg tcgtcaggtt gcgatggtcg
     2881 gcgatggtat caacgatgcg cccgcgctgg cgcaggcgga cgtcggtatc gcgatgggcg
     2941 gtggcagcga tgtggcgatt gaaaccgcgg cgattacgct gatgcgccat agtctgatgg
     3001 gcgtggcgga tgcgctggcc atttcgcgcg cgacgttgcg caatatgaaa caaaacctgc
     3061 ttggcgcatt tatctacaac agcattggta tcccggtggc cgccggtatt ctgtggccgt
     3121 ttaccggtac cttgttaaac ccggtagtag cgggcgcggc aatggcgctg tcttccatta
     3181 ccgtcgtcag caatgccaac cggctattgc gctttaaacc gaaagcgtaa aaagtctata
     3241 cccaaaataa ttcgagttgc ttaaaggcgg caagggagtg agtccccagg agcatagata
     3301 actatgtgac tggggtgagc gacaaatctg ccgggagcag atttgaacgt cgcgtgcgac
     3361 ggcccgtcag ggcgaggccc atggatgggc cgagtaatcc gtagccaaca cataagcaac
     3421 ttgaagtatg aagggtatat atcaggcagc atcagctgcc tgatatatta ttaagccatc
     3481 agcaatttac cgtatcaata tataaaaatt taaccgcaca tcctatagaa aaataaaaac
     3541 aacattttat aatgtttttt tgaatcataa ggatgtgtta tttatgttta gaaaagcagt
     3601 tacgcttctt ttcctgcttt ctcccgcagt tagttatgca ggattatttg attccactcc
     3661 agagttaaaa tgtggcaacg ataatgcagt cacggcggca aaagagtgga tttacaatga
     3721 agcattaggt cgtttacagc aagactatat taaagagccc tccacgcttt tcttcgatat
     3781 cccccagact caatacgagc agcaactccg ggctattcct gttcaattca gtgatgtaat
     3841 cacgcagaac cctcaaccag aaaatgccaa cctacgaact tgctcggcta ccgtcgccat
     3901 gagtattcct cagccattgt ttaaattaat gaaagactta ccaaatactc tattctatat
     3961 ttcacaaggg gatggacagg taataaacaa tacggtgacc tggaaacagg ttaactacaa
     4021 tattcagcta gcagacaaca ataaagatat tgttgtcacc cctgtgcaga aaaccgataa
     4081 attggcgcgg tctatttatg taatggcaag aatgacggta tctggtgata gcattataaa
     4141 gaaaaaaaat aactcactga ttgaaatcgc agcaaagaaa tttgagagta gagatcgcga
     4201 gcttaatcag gtctggaatt cgctacccac ctctgcccga acggcattaa aacaagagca
     4261 gcgagtctgg gtgacaaaaa aagagcaaca gtgcggcaaa cttagcgatg caaaatccga
     4321 ggacatacct gctgaaaagc gcatcagtat ttataaatgc cagcttgaaa tgaccatcgc
     4381 cagaacgacc tatctcgacg gcagcgaact acccgactga tcgttgacgt cccgtcaggg
     4441 cgcattgcgc ccttttctcc aacgcgctag catgagcttt ttcaaaggga gcgcgtatgg
     4501 agctattaaa tcaacttaaa cgtttatgcc gcgcgctgcg tggtacccca aatagttggc
     4561 ctgctatcga tctctccctg cccggcggtc gtcatctgca tctggttggc agtattcata
     4621 tggggacgcg cgatatagct cctcttccag caaagctggt gaaaaagcta cgccaggccg
     4681 acgcgctggt cgttgaagcg gatatttccg gtaacgaaac gccattcagc aatctcccca
     4741 aatgcccgcc gttggtcgaa cgtctcagcg ccgggctgct aaacacactg gaaaaacggg
     4801 tcagcgagtt gggtatgccg ctgatccatt ttgataatca acctttatgg cagatagcta
     4861 tggtgctaca ggccacgcag gcgcaacggc tgggattgcg cccggactat ggcattgatt
     4921 atcagctatt acaggctgcc cgcgaaatgt cgctgccggt gcaagagctg gaaggggcga
     4981 aacaccagct cgaactacta tgcgatctgc ccgatggcgg gatggcgctg ctcgacgaca
     5041 cgctgacgca ctggcacacc aacgcacggc ttttgcaggt gatgatcggc tggtggcttg
     5101 aacagccgcc gaccagcatc ggcgcttcgc tccccagaac gtttagccaa ccgctgtatg
     5161 atgtactgat ggtgaaacgc aatgaagcct ggcgcgacgc gctgctggca ctgccaccgg
     5221 gacgctacgt ggtagccgta ggggcgctac atctgtacgg cgaaggcaac ctaccgcaaa
     5281 tattgaaata aaaaatggcc aatatcgcta ttggcccgtc aaagaggaat ttcatcgtta
     5341 ttattatccc gacgctttcg cttcggatct tcagattgtc gctcaaagtt gccgcaactg
     5401 ccaagaccta atgcacaaga ttatactatt ttttagtccg ctttcgggcg tatgctgatg
     5461 gcaaatcacg tctgtagtaa gaaggaacgt tatgacaccc gcagttaagt tactcgaaaa
     5521 gaacaagatt ccgtttaaca ttcacaccta cgatcacgat ccgaatgaaa ctaactttgg
     5581 cgatgaagtg gtgcgtaagc tcgggctaaa cgccgatcag gtgtataaaa cgcttttggt
     5641 tgccgtgaat ggcgatatga agcaactggc cgtcgccgtg acgcctgtag ccgggcagct
     5701 ggatttgaaa aaagtcgcca aagctctggg cgcgaaaaag gtcgatatgg ccgacccgat
     5761 ggtggcgcaa cgcaccacgg gatacctggt cggcgggatc agtccgctgg gacagaagaa
     5821 acggctgcct acgctgattg acgcgccagc ccgcacgttt gccactattt atgtttccgg
     5881 tggtaaacgc gggctggata ttgaactggc ggctgacgat ttggccgcca tcctgagtgc
     5941 taaattcgct gatatcgcgc gtcgggatta agcctgcgta aaatacattg ccggatagcg
     6001 gcgcaaacgc cttatccggc ctacagcata cataatccgt aggccttaag gctgtgcgcc
     6061 atcaggcaga gatggctatc agtaccgcta cagccagttc acctcgccat ttggcgtaaa
     6121 cgccgccgca tccaacggtg aattctgctg aataaactct ttcagcactt ccgcgtcaat
     6181 aaacccggta ttcacgtagc ccggtttgtt atcgatgcgc ggataaccat cgccgcccgt
     6241 ggcgttgaaa ctcagcgtcg ccatgcggta ggttttggcc ggatcaacag gctcgccttt
     6301 gattttcaga tcggtgagct tgccctcttt ggcgacaaag ctcacattgg cgaactgtgg
     6361 ataggcgccg gagtccggtt tcatctgcgc tacggcggtg agataatcaa ccacctcttt
     6421 gccgctcata tcggcataca ccacaatgtt gccgaacggc tgtaccttga gcacgctttt
     6481 ataggtaata tctcccgcct caatcgagtc gcgaataccg ccgccgctca tcacgccaaa
     6541 atcggcaccg gtgcgcgcga tctgcgcagc cagaatcacc cgtcccatat tggtctggac
     6601 aaatctgacc ttactgcgat cgccttcaag caggccattc acgctaccaa ttttcacctc
     6661 cagttgcgct ttacctttat tctggaacgg cgttaataac gagagcattt gcggattttc
     6721 ggcgatttcc ggcgtgtaaa gtacacgctc gcttttcccg ttatcccagg tcactttttt
     6781 cttgagattt accggaataa gctggtagtt aaccattttc atctcgccgt tacggaattc
     6841 gaaatccgcg tggcccacat atttacccca ctcatgcgcc tgcacgctcc agatgccatt
     6901 ttgcttatcc ggcgcgcagg gcgttcccgt tacgtaattc acctgttttt attttccgac
     6961 gccatgcata ccgggtcttg tgagtgaccg cccacaatca tcgccagcga accggcaggc
     7021 agactacgcg ccatctcaac gtcgcccggc gcattcgaac cgtgatcgcc gttgtcataa
     7081 tgtcccatat gcgtggtcgc gataatcacg tccggttttt cattcatatt aagttcctga
     7141 atcaccacct ttgcttcttc agcaggttta cgaaactcaa tatcggtgaa atattccggg
     7201 ttgcctattt tcgccgtgtc atcggtggtt aagccgatta ccgcgatttt tatatcctgg
     7261 cgtgtaaaaa tagcccacgg cttaaacaga cgctcgccgg tacttttttg ataaatattg
     7321 gcggaaagaa agggaaactt cgcccacttt tcctgctggc gcaatacggt gagcggatta
     7381 tcaaattcat gattaccgac ggccatagcg tcgtagccaa tcagattcat cccgcggaaa
     7441 tcgggctcca catcctggag atcggattcc ggcactccgg tattaatgtc gccgccggat
     7501 aacaacagga cgcttccccc ctcttgcgcc acctctttac ggatactgtc caccagcgtt
     7561 ttttgcgccg ccagaccata ttcgccatat tcgctgcgcc agaagtgacc gtggtgatcg
     7621 ttggtatgca ggatagtaat tttataggtt ttatcttttt cgtaagcctg tgcaggctga
     7681 gtcgtcagcg cgaacgccgc cagtaacgcc agcgccacac cccgtttcaa aaatttcatc
     7741 tttctctccc tgactcaata tcaaccgcag aaattacctt tccttgcaat aatagacaaa
     7801 tatgttttca gaattgagac ttccttcaaa cacatttcac aggtatgtta ggcaagtaat
     7861 aattacacat cctactatct ccaacatcgc ataaaattta agtgactttc tatggccatg
     7921 agtgaaccaa cccagccgtt agccggcgcg cccgcagcgg ccgctaaagc acgtacttcg
     7981 tttggtattt tgggcgcgat cagtctttcc catctgctga acgatatgat ccagtcgcta
     8041 atcttagcta tttatcccct gttgcaggcg gagttttcgc tgactttcgt ccagataggt
     8101 ttgatcaccc tgacgttcca gctcgcctca tcgctactgc aaccggtcgt cggctactgg
     8161 acggataaat atcccatgcc gtggtcgctg cctgtcggca tgtgttttac cctgagcggg
     8221 ctggtactgc tggcaatggc gggaagtttt ggcggcgtat tgctcgc
//
LOCUS       DAGWFR010000170         8231 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.172, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000170 DAGWFR010000000
VERSION     DAGWFR010000170.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 8231)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8231)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8231
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.172"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..204)
                     /locus_tag="MOX77_003816"
     CDS             complement(<1..204)
                     /locus_tag="MOX77_003816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HCA3359226.1"
                     /translation="MTALLELCNVSRSYPSGEEQVAVLKDISLQIHAGEMVAIVGVSG
                     SGKSTLMNILGCLDKPTSGTYRVA"
     gene            complement(201..1319)
                     /gene="macA"
                     /locus_tag="MOX77_003817"
     CDS             complement(201..1319)
                     /gene="macA"
                     /locus_tag="MOX77_003817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="macrolide transporter subunit MacA"
                     /protein_id="HCA3359227.1"
                     /translation="MRAKGKKFKKRYLVIILILLVGGMVSWRMINAPLPTYQTLIVRP
                     GDLEQSVLATGKLDALRKVDVGAQVSGQLKTLLVSIGDNVKKDQLLGVIDPDQAENQI
                     KEVEATLMELNAERQQAAAELKLARVTLARQQQLAKTQAVSQQDLDTAATELAVKQAR
                     IGTIDAQIKRNRASLDTAKTNLEYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTL
                     ADMSTMLVKAQVSEADVIHLRAGQKAWFTIAGDPQTRYEGVLKDILPTPEKINDAIFY
                     YARFEVPNPKRILRLDMTAQVYIQLMDVKNVLIIPLAALGEPVGGNRYKVALLRNGEK
                     REREVVIGERNDTDVEVVKGLEAGDEVIIGESRPGATP"
     gene            1465..2415
                     /locus_tag="MOX77_003818"
     CDS             1465..2415
                     /locus_tag="MOX77_003818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001519667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VirK/YbjX family protein"
                     /protein_id="HCA3359228.1"
                     /translation="MTQLTDNTWYTSDYISPLQLFIRLTRGQLQPGKFWRKASFRRKF
                     LIRSLVMPRATSQLLTNLTQWPKLNTLLARQPRLPIRLHRPYMAVNIKRDFALDALCF
                     HYQQMRQLLSREQQVSYLSQYGLNLAKFEAKTGELFQLDLVSLVSLDKEGESTIVVRD
                     AQLRILAEITFTLCRFNQQRTLFIGGLQGAANDVPHEIIQQATKACHGLFPKRIVMEA
                     LCQFAQVFQAEKIIAVSNDAHVYRSWRYMDKKTQMHADYDAFWESLGGERIKGNYYTL
                     PLAIARKSEAEIASKKRAEYRRRYALLDSVVEQVPATFKR"
     gene            complement(2412..4070)
                     /locus_tag="MOX77_003819"
     CDS             complement(2412..4070)
                     /locus_tag="MOX77_003819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459916.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent endonuclease"
                     /protein_id="HCA3359229.1"
                     /translation="MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTL
                     LLSPELDLYHFVREDFWFPPGDIKGREHHLHIILTFRETQPGRHRVRRYRALEACWSP
                     CEDDFHRIFYRLEGECGADGSVMTLRSFLNSDGQPLPVENINDQVRHLVRLMPVLRLR
                     DARFMRRIRNGTVPNVPDVEVTARQLDFLARELATRPQNLTDGQIRQGLSAMVQLLEH
                     YFSEQGAGQARHRLMRRRSQNEQRSWRYLDIINRMIDKPGSRSHRVILLGLFSTLLQA
                     KGTLRLHKDARPLLLVEDPETRLHPIMLSVAWQLLNLLPLQRIATTNSGELLSLTPVE
                     HVVRLVRESSRVAAWRLGTGGLSAEDGRRIAFHIRFNRASSLFARCWLLVEGETETWV
                     INELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATV
                     RSLLNNDREEEREHLTALPTLDMEHFMYRQGFADVFHRVAQLPLNVPMNTRKIITKAI
                     HRSSKPDLAIEVAMEAGRRGIDAVPPLFRKMFSRVVWLARGRAD"
     gene            4271..5170
                     /locus_tag="MOX77_003820"
     CDS             4271..5170
                     /locus_tag="MOX77_003820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine exporter LysO family protein"
                     /protein_id="HCA3359230.1"
                     /translation="MFSGLLIILVPLIVGYLIPLRHKAALQLINRLLSWIVYLILFFM
                     GISLAFLDNLASNLVAIFHYSAVSITIILLCNIAALLWLERILPWRHHHQQEKLPSRI
                     AMALESLQLCGVVVLGFIIGLSGLSVLQHATEASEYTLIFLLFLVGIQLRNSGMTLKQ
                     IVLNRRGMMVAVVVVASSLLGGVINAFILDLPLKTAMAMASGFGWYSLSGILLTESFG
                     PVIGSAAFFNDLARELLAIMLIPGLVRRSRSTALGLCGATSMDFTLPVLQRSGGVEIV
                     PAAIVHGFILSLLVPLLMAFFSA"
     gene            5314..6966
                     /gene="hcp"
                     /locus_tag="MOX77_003821"
                     /gene_synonym="priS"
     CDS             5314..6966
                     /gene="hcp"
                     /locus_tag="MOX77_003821"
                     /gene_synonym="priS"
                     /EC_number="1.7.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005122080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxylamine reductase"
                     /protein_id="HCA3359231.1"
                     /translation="MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIAALQG
                     LSAWAVKAREYGIINHDVDNFAPRAFFSTLTNVNFDSPRIVGYARDAIAMREALKAQC
                     LSVDANAHCDNPMADLQLVSDDLGELQRQAAEFTPNKDKAAIGENILGLRLLCLYGLK
                     GAAAYMEHAHVLGQYDNDIYAQYHKIMAWLGTWPADMNALLECAMEIGQMNFKVMSIL
                     DAGETTKYGHPTPTQVNVKATEGKCILISGHDLKDLYNLLEQTEGTGVNVYTHGEMLP
                     AHGYPELRKFKHLVGNYGSGWQNQQVEFARFPGPIVMTSNCIIDPTVGSYDDRIWTRS
                     IVGWPGVSHLEGDDFGPVIAQAQQMAGFPYSEIPHLITVGFGRQTLLGAADTLIDLVS
                     REKLRHIFLVGGCDGARGERNYFTDFVTSVPDDCLILTLACGKYRFNKLEFGDIEGLP
                     RLVDAGQCNDAYSAIILAVTLAEKLGCGVNDLPLSLVLSWFEQKAIVILLTLLSLGVK
                     NIVTGPTAPGFFTPDLLAILNEKFGLRSVTTVEEDMKQLLSA"
     gene            6978..7946
                     /gene="hcr"
                     /locus_tag="MOX77_003822"
     CDS             6978..7946
                     /gene="hcr"
                     /locus_tag="MOX77_003822"
                     /EC_number="1.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH oxidoreductase"
                     /protein_id="HCA3359232.1"
                     /translation="MTMPTSQCPWRMQVHHIRQETPDVWTIALLCHDYYPYRAGQYAL
                     VSVRNSAETLRAYTLSSTPGVSEYITLTVRRIEDGTGSQWLTHDIKRGDYIWLSDAMG
                     DFTCDDKTEDKFLLLAAGCGVTPIMSMRRWLAKYRPQADVQVIFNVRSPDDVIFADEW
                     RQYPVTLVAENHATEGFIAGRLTTELLQRVPDLASRTIMTCGPAPYMDFVEQGVKALG
                     VTHFFKEKFFTPVAETATSGLKFTKLQPAQEFYAPIGTTLLEALESNKVPVAAACRAG
                     VCGCCKTKVVSGDYTVSSTMTLSEAEIAEGYVLACSCHPQGDLVLA"
BASE COUNT         1879 a         2287 c         2079 g         1986 t
ORIGIN      
        1 cgccacccga taagtgccgc tggtcggttt atccaggcac ccgaggatat tcatcagcgt
       61 tgattttcca gaaccggaaa cgccgacgat cgccaccatc tccccggcgt ggatttgcag
      121 ggagatatct ttcaacaccg ccacctgctc ttctccggag gggtagctgc ggctcacatt
      181 gcacagttca agcaatgccg tcatggcgtc gctcctggcc tgctctcgcc gatgatcacc
      241 tcatcgcccg cttccagacc tttaaccact tccacgtctg tatcgttacg ctcgccaatg
      301 accacttcgc gctcacgttt ttcgccgtta cgcaacagcg ccactttata acgattaccg
      361 cccaccggct cgccaagcgc ggcgagagga ataatcagca catttttgac atccatgagt
      421 tgaatataaa cctgtgcggt catatcaaga cgcaagattc ttttgggatt cggcacttca
      481 aaccgggcgt aataaaaaat agcgtcgttg atcttttccg gcgtcggcag aatatctttt
      541 aaaacgcctt catagcgcgt ttgcggatcg cctgcaatgg tgaaccatgc tttctgcccc
      601 gcccgaagat ggatcacgtc cgcttccgag acctgcgctt ttaccagcat ggtgctcata
      661 tccgccagcg tcagaatatt gggcgcctgc tgagctgcaa tcaccgtttg tccttgcagg
      721 gtagtgattt gcgtcacttc ccccgccatg ggggcgacaa tacgggtata ttccaggttg
      781 gttttcgcgg tgtccaacga ggcccgatta cgtttgatct gggcatctat ggtgccaata
      841 cgcgcctgtt taaccgccaa ctccgtcgcc gcagtatcca gatcctgttg cgataccgcc
      901 tgagtcttag ctaactgctg ctggcgcgcc agcgtaaccc gcgccagctt taactcagcg
      961 gctgcctgct gacgctccgc gttcagctcc atcagggtgg cctcgacctc ttttatctgg
     1021 ttctccgcct gatctgggtc aatcacgccg agtagctgat cttttttaac gttatcgcca
     1081 atggagacca gcagcgtttt caactggccg ctcacctgcg cgccgacatc cactttacgc
     1141 aacgcgtcca gttttccagt cgccagtaca ctctgttcaa gatcgcctgg ccgcacgatt
     1201 aatgtctgat aagttggcag cggcgcattt atcattcgcc agctaaccat cccccccact
     1261 aaaagaatta aaataatgac cagataacgc tttttaaatt tctttccctt agcacgcata
     1321 gaaaccctga cggcaaaatt ttaaccagaa agtaaaccgt atctaaacaa acctgacgca
     1381 ataaagatag cgccggctgt attgacgatt ggttaatgtt tcctgtggtt caatctcgac
     1441 aatcttatgt cgcggattac gatcatgaca cagcttacag ataatacctg gtacacttca
     1501 gattacatct ctcctttaca attatttatt cgtctgacgc gcgggcaatt acagccagga
     1561 aaattctggc gtaaagccag ctttcgtcgc aagtttttaa tccgctcatt agtcatgccg
     1621 cgtgcaacca gccaattact gaccaatctc acccaatggc cgaagttaaa tacgttactt
     1681 gctcgtcagc cgcgtttgcc tattcggcta catcgtcctt atatggctgt aaatattaaa
     1741 cgcgatttcg ccttagacgc tctgtgtttt cattatcaac agatgcgcca acttttatcg
     1801 cgggaacaac aagttagcta tttaagtcag tatggcctga atcttgctaa atttgaagct
     1861 aaaaccggcg agttgtttca acttgattta gtcagtctgg tctcactgga taaagaaggt
     1921 gaaagcacta ttgttgttcg cgacgcacag ttacgtattc tggcagagat cacatttacc
     1981 ctgtgtcgct ttaaccaaca acgcacacta tttatcggcg gattacaggg cgcggcaaac
     2041 gacgtccctc acgaaattat ccagcaggcg accaaagcct gccatggtct ttttcccaaa
     2101 cgcatcgtga tggaggctct ctgtcagttt gcgcaagtct ttcaggcaga aaagattata
     2161 gccgtgagta acgatgcgca cgtttatcgt agctggcgat acatggataa aaagacgcaa
     2221 atgcatgccg actatgacgc gttttgggaa tcgttaggcg gtgaaagaat taaagggaat
     2281 tactatacgc tgccgctggc gatcgcccga aaaagcgaag cggagatcgc cagtaaaaaa
     2341 cgggccgagt atcgccgccg ctatgcatta ctcgatagcg tcgtcgaaca ggttccggcc
     2401 acattcaaac gctaatccgc ccggccccgc gccagccaaa ccacgcgcga gaacatcttt
     2461 ctgaacagcg gcggcacggc gtcaattccg cgccgcccgg cttccatcgc gacttcaatc
     2521 gccaaatccg gctttgacga gcggtggata gctttagtga taattttccg ggtattcatc
     2581 ggcacattaa gcggaagttg cgcaacccgg tgaaaaacat cggcaaagcc ctgacgatac
     2641 ataaaatgtt ccatatccag cgtaggcagc gccgtgagat gttcgcgttc ttcttcccga
     2701 tcgttattaa gcaggctgcg gaccgtcgcg gcatattttt tccccgcttc gtcgccatcc
     2761 accaggacat gccactcgat tcccatacgg cgggcgaact tcaccagcgg tttcaggcca
     2821 gactgagcaa attcaatgac tttaattccc tccgcatcaa aatgatgtcc acactgacgc
     2881 gccagctcat taataaccca ggtttccgtc tcgccttcca ccagtagcca gcaacgcgca
     2941 aacagcgacg acgcgcgatt aaagcggata tgaaaggcga tgcgccgtcc atcttccgcg
     3001 cttaacccgc ccgtgcccag acgccaggcg gcgacgcggg aagattcgcg caccagccgt
     3061 acgacatgct ccaccggcgt tagcgagagc agttcgcctg agttggttgt cgctatccgc
     3121 tgtagcggta acagattgag caattgccag gcgactgaaa gcataatggg atgtaaacgg
     3181 gtttccggat cttccaccag cagtaatggt cgcgcgtctt tatgtaaccg cagcgtccct
     3241 ttcgcctgta acagcgtgga gaaaagcccc agcaggatca cccgatgcga ccggctgccc
     3301 ggtttgtcga tcatccgatt aataatatcc agatagcgcc agctacgctg ctcattttgc
     3361 gaacgccggc gcatgagtcg gtgacgcgcc tgtcctgcgc cctgctctga gaaatagtgt
     3421 tcaagcagtt gcaccatcgc ggacagtccc tgacgaatct gcccgtcggt taaattttgc
     3481 ggccgggtcg ccagctcacg cgccagaaaa tccagttgcc gggccgtgac ttcaacatcc
     3541 ggcacattgg gcaccgtgcc gttgcgaata cgtcgcataa agcgcgcatc gcgcaaacgt
     3601 agcactggca tcagacgaac caggtggcgc acctgatcgt taatattttc caccggcaat
     3661 ggctgcccat cgctattgag aaaactgcgc agcgtcatca cgctgccatc ggcgccacat
     3721 tcgccctcta gacgataaaa aatacggtga aaatcatcct cgcaaggcga ccagcatgct
     3781 tccagcgccc gataacgacg tacccgatgc cgccctggct gcgtttcgcg aaaagtcaga
     3841 ataatatgca ggtgatgctc gcgtcctttt atgtcgccag gcggaaacca gaaatcctca
     3901 cggacaaaat ggtagagatc gagttccggc gacaataaca gagtcagcgc atccagcagg
     3961 ctggatttgc cccaggcgtt ttccccaatc agcacgttgt tttgctccag catcaacgat
     4021 agtcggttga taccgcgaaa tcctactatt tcaacgcgtt cgagaatcat gcttcctcca
     4081 gaaaaacgtc accactccat taaactcacc gcagtataac ggcaaatgct tccgcctggc
     4141 gtgatattcc cccctttgcc tggggcaact gtctgataaa tgtacggctg acggtgtcgc
     4201 tttactgata gtctggaatt cggtagtgtc atgtacgcta ttcaaacaat aaaaaagggc
     4261 ccggctgttc atgttttcag gacttttaat cattctggtt ccactgattg tgggctatct
     4321 cattccactg cgacataaag ccgcattaca actcattaac cggctactga gctggatcgt
     4381 gtaccttatt ctctttttta tgggaataag cctggcgttt ttggataacc tcgccagtaa
     4441 tctggtggcg atttttcatt attccgccgt cagtattacg attattttat tgtgtaatat
     4501 cgccgcctta ttgtggctgg aacgtatcct cccgtggcgt caccatcatc agcaggaaaa
     4561 actgccttcg cgtattgcca tggcgctgga gtcgctgcaa ctgtgcggcg tagtggtatt
     4621 ggggtttatc atcggcctga gcggactctc tgttttacag cacgccaccg aagccagtga
     4681 atatacgctg atctttttat tgttcctggt ggggattcag ctacgaaata gcggcatgac
     4741 cttaaagcaa attgtgctta accgccgggg aatgatggtc gcggtcgttg tcgtggcaag
     4801 ctcattactg ggcggcgtga ttaatgcgtt tatcctggac ttaccgctaa aaaccgccat
     4861 ggcgatggcg tcaggtttcg gctggtactc tctttccggt attttgctga cggagtcgtt
     4921 tggaccggtt atcggcagcg cggcattttt taacgatctg gcccgcgaac ttttggccat
     4981 tatgcttatt cccggtctgg ttcgccgcag ccgttcaacg gcgttgggcc tgtgcggagc
     5041 gacctcaatg gactttacgt tgccggtatt acagcgctcc ggtggcgtag agattgttcc
     5101 ggcggctatc gtacatggct ttatcctcag cctgctggta cctctcttaa tggcgttctt
     5161 ctcggcctga tacctctctg gcggtaggta tctgccgcca aaattgcgct aaatcaatct
     5221 ccttgcacat tatggcagaa atccctttta tccctttgtt cacaggcata atcttaaaca
     5281 tgtatattaa atataacttt aaaaggtgtg accatgtttt gtgtgcaatg tgaacaaacc
     5341 atccgtacac cagccggaaa cggctgctcc tacgcgcagg gaatgtgcgg taaaacggct
     5401 gaaacgtccg atctgcagga tctgctgatt gcggctttgc aaggtttgtc tgcctgggcg
     5461 gtgaaggccc gtgaatatgg catcattaat cacgacgttg ataactttgc gccgcgcgcg
     5521 tttttctcca cgctgaccaa cgttaacttc gactctccgc gtatcgtcgg ctacgcccgt
     5581 gacgctatag ccatgcgtga agcgttgaaa gcccagtgcc tgagcgtgga tgctaatgcg
     5641 cattgcgaca atccgatggc cgatctgcaa ctggttagcg acgatctggg cgaactgcaa
     5701 cgtcaggcag cggaatttac cccgaataaa gataaagccg ccattggcga gaacatcctc
     5761 ggcctgcgtc tgctgtgcct gtacggtctg aaaggcgcgg cggcgtacat ggaacacgcg
     5821 cacgttctcg gtcaatacga caacgacatt tatgcgcagt accacaaaat catggcctgg
     5881 ctcggcacct ggcctgctga tatgaacgcg ctgctggagt gcgcaatgga aatcggccag
     5941 atgaacttta aagtgatgag cattctggat gccggtgaaa ccaccaaata cggtcaccca
     6001 acgccgactc aggtcaacgt caaagcgact gaaggcaagt gcattctgat ctccggtcac
     6061 gatctgaaag atctctacaa cctgctggag cagaccgaag gcaccggcgt taacgtctac
     6121 actcacggcg aaatgctacc cgcacacggc tacccggaac tgcgtaaatt caagcatctg
     6181 gtcggtaact acggcagcgg ctggcagaat cagcaggtcg aattcgcccg cttccctggc
     6241 ccaatcgtga tgacctctaa ctgcattatc gacccgaccg tgggcagcta tgacgaccgt
     6301 atctggaccc gtagcatcgt cggctggccg ggcgttagcc atcttgaagg tgatgacttc
     6361 gggccggtca ttgcccaggc gcagcagatg gcgggcttcc cgtatagcga aattccgcat
     6421 ctcatcaccg tcggttttgg tcgtcagacc ctgctcggcg ctgccgatac gctcatcgat
     6481 ctggtcagtc gtgaaaaact gcgtcacatc ttcctggtcg gcggctgtga cggcgcgcgc
     6541 ggcgagcgta actactttac cgatttcgtc accagcgtgc cggatgactg cctgattctg
     6601 actctggcgt gcggtaaata ccgtttcaac aaactggagt tcggcgacat cgaagggctg
     6661 ccgcgtctgg tcgatgccgg tcagtgtaac gatgcttact ccgcgattat cctggcggtg
     6721 acgctggcgg aaaaactggg ctgcggcgtc aacgatctgc cgctatcgct ggtgctctcc
     6781 tggtttgagc agaaagcgat cgttattctg ctgacgctgc tgtcattagg cgtgaaaaat
     6841 attgtcaccg ggccgaccgc accaggcttc ttcacgccgg atttgctggc tatcctcaac
     6901 gagaagttcg gtctgcgctc cgtgaccact gttgaagaag acatgaagca attgctgagc
     6961 gcgtaaggag gccaatgatg acgatgccaa cctcacaatg tccctggcga atgcaggtgc
     7021 atcacatccg tcaggagacg ccggatgtat ggacaattgc gctattatgc catgactact
     7081 acccttaccg cgccgggcag tatgcgctgg tgagcgtgcg caattcagcg gaaacgctgc
     7141 gcgcctacac cctttcgtct acgccgggcg tcagtgaata tatcacgctg accgttcgtc
     7201 ggattgaaga tggcacgggt tcacagtggt tgacccatga catcaagcgc ggcgattaca
     7261 tctggctgtc tgatgcaatg ggcgatttta cctgtgacga taaaacagaa gataagtttc
     7321 tgctgctcgc cgccggttgt ggcgtaacgc caatcatgtc gatgcgtcgc tggctggcga
     7381 aataccgccc gcaggccgac gtgcaggtca tctttaacgt ccgttcgccg gatgatgtga
     7441 tttttgccga cgagtggcga cagtatccgg tcacgctagt ggcggaaaat catgccacgg
     7501 aaggttttat cgcgggccgt ctgaccacgg aattgttaca gcgcgtaccg gatttggcat
     7561 cgcgcactat catgacctgc ggcccggcgc cctatatgga tttcgttgaa cagggagtga
     7621 aagcgcttgg cgtaacgcac ttctttaaag agaagttctt cacgccggtg gcggaaacgg
     7681 caaccagcgg cctgaaattc accaaactac agccagcgca ggaattttat gccccaatcg
     7741 gtacgacgct gctggaggcg ctggagagta ataaagtacc ggttgccgct gcctgtcggg
     7801 caggtgtttg cggctgctgt aaaaccaaag tcgtttccgg cgactatacg gtgagcagca
     7861 ccatgacgct gagcgaggcg gagattgccg aaggttacgt actggcctgc tcctgccatc
     7921 cgcagggcga tcttgttctc gcataatcgg taaacgttcc atcgtaggcc cggtaagcgt
     7981 cagcgccacc gggcgattta ccactcgctt catcctttcg cccctctctc cgccaaagaa
     8041 aaacgtcatc gtcatcttca actaaacttg taaccgttat cacatttaag gagatggaga
     8101 accatgaaac aaaccgttgc tgcttttatc gccaaaacgc tggaacaggc tggcgtaaaa
     8161 caaatctggg gcgtcactgg cgactccctg aacggcctga gcgatagtct taatcgtatg
     8221 ggaaccattg a
//
LOCUS       DAGWFR010000171         8204 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.173, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000171 DAGWFR010000000
VERSION     DAGWFR010000171.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 8204)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8204)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8204
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.173"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..282
                     /locus_tag="MOX77_003823"
     CDS             <1..282
                     /locus_tag="MOX77_003823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HCA3359233.1"
                     /translation="GVTVDLAARLIHRGDEEIHLTPIEFRLLAVLLNNAGKVLTQRQL
                     LNQVWGPNAVEHSHYLRIYMGHLRQKLEQDPTRPRHFIIETGIGYRFMP"
     gene            560..661
                     /locus_tag="MOX77_003824"
                     /pseudo
     CDS             560..661
                     /locus_tag="MOX77_003824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001312672.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2618 domain-containing protein"
     gene            1044..3112
                     /locus_tag="MOX77_003825"
                     /pseudo
     CDS             1044..3112
                     /locus_tag="MOX77_003825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459686.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine decarboxylase"
     gene            3109..4428
                     /gene="potE"
                     /locus_tag="MOX77_003826"
     CDS             3109..4428
                     /gene="potE"
                     /locus_tag="MOX77_003826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine-ornithine antiporter"
                     /protein_id="HCA3359234.1"
                     /translation="MSKPKSNKMGVVQLTILTMVNMMGSGIIMLPTKLSEVGTISIIS
                     WLVTAVGSMALAWAFAKCGMFSRKSGGMGGYAEYAFGKSGNFMANYTYGVSLLIANVA
                     IAISAVGYGTELFGAALTPLQIGLATIAVLWVCTIANFGGARITGQISSVTVWGVIIP
                     VVGLCIIGWFWFSPSMYVASWNPHHVPFFSAVGSSIAMTLWAFLGLESACANADVVEN
                     PEKNVPIAVLGGTLGAAVIYIVSTNVIAGIVPNMDLANSTAPFGLAFAQMFTPAVGKV
                     IMALMVMSCCGSLLGWQFTIAQVFKSSADEGYFPKVFSRVTKVDAPVQGMLIIVIIQT
                     GLSLMTISPSLNSQFNVLVNLAVVTNIIPYILSMAALVIIQKMANVPSSKAKVANFVA
                     FVGAMYSFYALYSSGEEAMLYGSIVTFLGWTLYGLVSPRFELKNKHG"
     gene            4493..4978
                     /locus_tag="MOX77_003827"
     CDS             4493..4978
                     /locus_tag="MOX77_003827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HCA3359235.1"
                     /translation="MSNPEREVTDIAEILAILSKHEVCRIGFNDNLCPYVVPVNFGYE
                     YQNGRWIFYFHGARTGKKMRLLRKNPAVCIEMDGDHALLRADDPCDYSYAYTSVFATG
                     LASILQTREEMRHGLDVIMRQTDPGKTFSYREDMMKAVCVVRIECDALTCRRHLATQS
                     E"
     gene            complement(5093..6733)
                     /gene="pgm"
                     /locus_tag="MOX77_003828"
     CDS             complement(5093..6733)
                     /gene="pgm"
                     /locus_tag="MOX77_003828"
                     /EC_number="5.4.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-D-glucose phosphate-specific
                     phosphoglucomutase"
                     /protein_id="HCA3359236.1"
                     /translation="MAIHNRAGQPAQQSDLINVAQLTAQYYVLKPEAGNAEHAVKFGT
                     SGHRGSAGRHSFNEPHILAIAQAIAEERAKNGITGPCYVGKDTHALSEPAFISVLEVL
                     AANGVDVIVQENNGFTPTPAVSNAILVHNKKGGPLADGIVITPSHNPPEDGGIKYNPP
                     NGGPADTNVTKVVEDRANALLADGLQGVKRISLDAAMASGHVKAVDLVQPFVEGLADI
                     VDMAAIQKAGLTLGVDPLGGSGIEYWKRIAEHYKLNLTLVNDQVDQTFRFMHLDKDGA
                     IRMDCSSECAMAGLLALRDKFDLAFANDPDYDRHGIVTPAGLMNPNHYLAVAINYLFQ
                     HRPLWGKDVAVGKTLVSSAMIDRVVNDLGRKLVEVPVGFKWFVDGLFDGSFGFGGEES
                     AGASFLRFDGTPWSTDKDGIIMCLLAAEITAVTGKNPQEHYNELAARFGAPSYNRLQA
                     AATSAQKAALSKLSPEMVSASTLAGDPITARLTAAPGNGASIGGLKVMTDNGWFAARP
                     SGTEDAYKIYCESFLGEEHRKQIEKEAVEIVSEVLKNA"
     gene            complement(6758..7300)
                     /gene="seqA"
                     /locus_tag="MOX77_003829"
     CDS             complement(6758..7300)
                     /gene="seqA"
                     /locus_tag="MOX77_003829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation negative regulator SeqA"
                     /protein_id="HCA3359237.1"
                     /translation="MKTIEVDDELYSYIASHTKHIGESASDILRRMLKFSATTQPTAS
                     AVKGTPAAQPVAEAKPVNPVKDKVRAMRELLLSDEYAEQKKAVNRFMLILTTLYSLDH
                     HAFAEATESLHGRTRVYFAADEQTLLKNGNQTKPKHVPGTPYWVITNTNTGRKCSMIE
                     HIMQSMQFPAELIEKVCGTI"
     gene            7485..>8204
                     /gene="ybfF"
                     /locus_tag="MOX77_003830"
     CDS             7485..>8204
                     /gene="ybfF"
                     /locus_tag="MOX77_003830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase"
                     /protein_id="HCA3359238.1"
                     /translation="MKLNIRAQSAQNLHNNSPIVLVHGLFGSLDNLGVLARDLVTDHD
                     IIQVDMRNHGLSPRDPVMDYPAMAQDLLDTLDAQQIEKATFIGHSMGGKAVMALTALA
                     PDRIDRLVAIDIAPVDYHVRRHDRIFAAINAVSESDATSRQQAAGIMRQHLNKEGVIQ
                     FLLKSWAEGEWRFNVPVLWEQYPHIVGWETIPPWEHPALFIPGGNSPYVTEAYRDALL
                     AQFPLARAHVIAGAGHWVHAEK"
BASE COUNT         1893 a         2191 c         2088 g         2032 t
ORIGIN      
        1 ggcgtgacgg tcgatctcgc cgcacggttg atccaccgtg gcgacgaaga aatccatctg
       61 acgccgattg agttccgcct gctggcggta ttactcaata atgccggcaa ggtattaacc
      121 caacggcagt tattaaacca ggtctggggc cctaacgccg tggagcatag ccactatttg
      181 cgcatctata tgggacattt acgccagaaa ctggaacaag atcccacccg cccacgccat
      241 tttattatcg aaaccggaat tggctatcgc tttatgccgt gaatagctat tcattatttt
      301 taaataactt ttaattttta tgtcatttat tttcggcgtc gcgaataatt attttcgcgg
      361 cgatattata ttttatggag gatataaaaa acatataatt aacatttaag aaacaatccg
      421 ttatttcaca gcacgatatg cataatcgcc gactaattat ttttcaaatg atcgtttttt
      481 gttgatctgg ttcacagatt gctggcgctc cctggataaa atatccatgc tttcaataaa
      541 tcaatgaaag gacctcaaaa tggaaaataa taatcgtttt atgccccata taaggcggac
      601 aacgcatatt atgatgtttg cccaccgtaa tagtttcgac tttcatttct ttaatgcccg
      661 gtattttttc tgctacgggt acttcagcat acaggtcttt ccgaccctta tgtcattcag
      721 gtctattgcc taaataactc gaattgttaa aagcgacagt acggtaattc ctttacgccc
      781 agccagctaa ctatgtggtt tgacagaaga aattccgact cagcgcaatt ttagttatcg
      841 cggtttctgc ctgtatatcg tagtactcaa ctccttaaat cctgaatttc ctgcaaccgg
      901 acgggttggg atttattaca tctaaaataa agctaattta ctgatttttt tatcagcggg
      961 atagctttga ttttttccgg aagaatcagt ttctcatgcg agaaattgag ggcctgctat
     1021 tacctgaaat aaagagatga aaaatgtcag aattaaaaat tgccgttagc cgtcattgcc
     1081 cggattgttt ttctacacac cgtaatattg taaatgttga tgagagtcgt ttcatcgacg
     1141 tggctgcatc cgtgttatcc atcgacgaca ttgaacacgg aaaactcgat gaaatcgacg
     1201 caacgggtta cggtattccc gtgtttgtcg cgactcatga cgaaggacgc gtaccgcctg
     1261 agtatttgcc gcgtatctct ggtgtattcg aatataatga atcccgtact gccttctatg
     1321 gtcgccagtt ggaaaccgca gcaagccact acgaaacgca gttacgtccg ccgtttttcc
     1381 gcgcgctggt ggattatgtc aaccagggca acagcgcatt tgactgcccg gggcatcagg
     1441 gcggcgaaag tctttaacgc cgataagacc tactttgtgc tgaacgggac ctcctcctct
     1501 aacaaagtcg tactcaacgc gctgttaacg ccgggcgatc tggtactgtt tgaccgtaac
     1561 aaccacaaat ctaaccacca cggcgcatta ttgcaggcgg gcgcaacgcc agtttatctg
     1621 gaaaccgcgc gtaaccgtat ggttttatcg gcgggatcga cgctcactgc ttcgaagaag
     1681 attacctgcg cgagctgatt agcgaagtcg cgccgcagcg tgcccacgaa gcacgtccat
     1741 tccgtctggc cgtcatccag ttaggcacct acgacggtac ttaggcacct acgacggtac
     1801 catttataac gcctgtcagg tcgtcgataa aattggtcat ctgtgcgact acatcctgtt
     1861 tgactccgcc tgggtcggct atgaacaatt tattccgatg atggccgatt gttcgccgct
     1921 gctgctggaa ctgaacgaaa acgatccggg tattctggtg acgcagtccg ttcacaaaca
     1981 acaagccggt ttctcccaga cctcgcagat ccataaaaaa gatagccata tcaaagggca
     2041 atcgcgctac gttccgcata agcgcatgaa caacgccttt atgatgcacg cctccaccag
     2101 cccgttctat ccgctgttcg ccgcgctgga cgttaacgcc aaaatgcacg aaggcgtcag
     2161 cggtcgcaat atgtggatgg attgcgtagt taacggcatc gatgcccgta aattgatcct
     2221 cgaaaactgt caccacatcc gtccgttcgt accggaactg attgatggta agccgtggca
     2281 gtcataccca acgtcagaga tcgccagcga tctgcgcttc ttccacttcg ttccgggaga
     2341 acactggcat gcgtttgaag gctatgccga acatcagtac tttgtcgacc cttgcaaact
     2401 gctgctcacc acaccgggca ttaatgcagc gagcggcgaa tatgaagact ttggcgttcc
     2461 tgccacgatc ctcgccaact tcctgcgcga gaacggcgtt gtgccggaaa aatgcgacct
     2521 caactccatt ctgttcctgc tgacgccggc agaagacatg gcgaagttac aacagcttgt
     2581 cgctctgctg gctcgtttcg aaaaactgct ggaagctgat gcgccgttag cggaagtatt
     2641 accgtccatc tacaaacagc atgaagcgcg ttatgccggc tataccctgc gtcagctttg
     2701 ccaggagatg cacgatctct atgcgcggca caacgtgaaa cagctgcaaa aagagatgtt
     2761 ccgtaaatcg catttcccga aagtcagtat gaacccgcaa gaggccaact atgcctatct
     2821 gcgcggcgag gtcgaactgg ttcgcctgcc ggaagcggaa ggtcgtatcg cggctgaagg
     2881 cgctctgcct tacccgccgg gagtgctgtg tgtagttccg ggtgaaatct ggggcggttc
     2941 tgtcctgcgt tacttcagcg ccctggaaga agggatcaac ctgctgccgg gctttgcgcc
     3001 tgaactgcag ggcgtttata tcgaagaaca cgacggccgt aagcaggtct ggtgctacgt
     3061 cattaaacct cgtgacgcgc agcgctccct gctgaaggag gaaaaattat gagtaaacct
     3121 aaatccaata aaatgggtgt cgtgcagctc acaattctga ctatggtcaa catgatgggc
     3181 tccgggatca tcatgctacc gaccaaactg tctgaagtcg gcacgatatc cattatctcc
     3241 tggctggtca ccgccgtcgg ctcgatggcg ctggcctggg cgtttgcgaa atgcggtatg
     3301 tttagccgta aatccggcgg catgggcggt tacgccgaat atgccttcgg taaatccggc
     3361 aactttatgg cgaactatac ctacggcgtc tcgctgctga tcgccaacgt ggctatcgcc
     3421 atctccgctg tcggctatgg taccgaactg ttcggcgccg cgctgacgcc gctccagatc
     3481 ggtctggcga ctatcgccgt attgtgggtt tgtaccatcg caaactttgg cggcgcgcgt
     3541 attaccggac agatcagtag cgttaccgtt tggggcgtca tcattccggt tgtcggcctg
     3601 tgcatcattg gctggttctg gtttagcccc agcatgtacg tagcgtcatg gaacccgcac
     3661 catgttccgt tctttagcgc ggtcggctct tccatcgcca tgacgttgtg ggcatttctt
     3721 ggactggaat ccgcctgcgc taacgcagac gtggtcgaga atccggaaaa gaacgtcccc
     3781 atcgcggtac tgggcggtac gctgggcgcg gcggtcatct atatcgtttc gactaacgtg
     3841 attgccggga ttgtgccgaa catggatctg gcgaactcca cggcgccgtt tggtctggcg
     3901 tttgcacaga tgttcacgcc tgcggtaggt aaagtgatca tggcgctgat ggtaatgtcc
     3961 tgctgcggct cgctgctggg ctggcagttc actatcgccc aggtctttaa atcctccgct
     4021 gacgaaggct atttcccgaa agtcttctct cgtgtaacga aagtcgacgc gccggtacag
     4081 gggatgctga ttattgtgat tattcagact ggcctgtcgc tgatgaccat tagcccgtcg
     4141 ctgaatagtc agtttaacgt cctggttaac ctggcggtgg tgacgaacat tattccgtat
     4201 attctgtcga tggccgcgct ggttatcatt cagaaaatgg cgaatgtgcc atcatcaaaa
     4261 gcgaaagtcg ctaacttcgt ggccttcgtt ggcgccatgt atagcttcta cgcgctatat
     4321 tcctccggtg aagaagccat gctgtacggc tcaattgtga ccttcctcgg ctggacgtta
     4381 tacggcctgg tctcaccgcg ttttgaattg aaaaataaac acggctgatg gcgcgcccgg
     4441 gctgcggtaa cgatagcccg ggcattttca ctctttgaat aagataatag aaatgagtaa
     4501 tccagaacgg gaagtcactg atatagcaga aatactggct attctcagta aacacgaagt
     4561 gtgtcggata gggtttaacg acaatctctg tccgtatgtt gtccccgtaa attttggcta
     4621 cgagtatcag aacggacgct ggatatttta ttttcacggc gcacgcaccg ggaaaaagat
     4681 gcgtctgtta cgtaagaacc cggcagtatg cattgaaatg gacggcgacc atgcattact
     4741 acgtgccgat gacccctgtg attatagcta cgcctacacc agcgttttcg ccaccggact
     4801 ggcatcgata ttgcaaacgc gcgaggagat gcgccacggc ctggacgtca ttatgcgcca
     4861 gaccgatccg ggaaaaacct tcagttatcg ggaagatatg atgaaagcgg tttgcgtggt
     4921 gcgtatcgaa tgcgacgccc tcacctgccg ccgacatctg gcgactcaga gcgaataagt
     4981 cagatatcac aagcgcctta tccggcctgg aggcggttta caggcctgat aagcgcagcg
     5041 ccgttaatac aaaaaaggag ccgtaaggct cctttttctt ccatatcgcc catcaggcgt
     5101 ttttcaatac ttcgctaacg atttcaacgg cttctttctc aatctgcttg cgatgttctt
     5161 cccccaggaa gctttcgcaa tagatcttgt aagcgtcttc cgtaccggat ggacgcgcgg
     5221 cgaaccagcc gttgtcggtc attaccttca ggccgccaat cgatgcgcca ttacccggcg
     5281 ctgcggtaag acgcgcggta atcgggtcgc ctgccagcgt gctggcgctc accatttccg
     5341 gagacagttt agacaatgcc gctttctggg ccgaggtcgc tgccgcctgc agacggttat
     5401 agctcggcgc gccaaaacgc gctgccagtt cattgtaatg ctcttgcggg tttttcccgg
     5461 taacggcggt gatttccgcc gccagcaggc acatgatgat cccgtcttta tcggtagacc
     5521 acggcgtacc gtcgaaacgc aggaacgaag cgcccgcgct ctcttccccg ccgaaaccaa
     5581 agctgccgtc gaacaaaccg tcaacaaacc atttgaagcc aaccggcact tctaccagct
     5641 tgcgtcccaa atcattcacc acgcggtcaa tcatcgcgga agagaccagc gttttaccga
     5701 cagccacgtc tttgccccac agcggacgat gctggaacag atagttaatg gcgaccgcca
     5761 gataatggtt cgggttcatc agccctgcag gcgtcacgat gccatgacgg tcgtagtccg
     5821 ggtcgttggc gaaggccagg tcaaacttgt cacgcagcgc cagcaaaccc gccatcgcac
     5881 attcggagga gcaatccatg cggatcgcgc catctttatc aaggtgcata aagcggaagg
     5941 tttgatcaac ctgatcgttg actaacgtca ggttaagctt gtaatgctca gcgatacgtt
     6001 tccagtattc aataccagag ccgcccagcg gatcaacgcc cagcgtcaga ccggctttct
     6061 gaatcgccgc catatcaacg atatccgcca gcccttcgac aaacggctgt accagatcta
     6121 ccgctttaac gtgacccgag gccattgccg catccagaga gatgcgctta acgccttgca
     6181 ggccatccgc cagcagcgca ttggcgcgat cttctaccac tttagtgacg ttggtatccg
     6241 ccgggccgcc attgggcgga ttatatttaa taccgccatc ttccggcggg ttgtgcgacg
     6301 gtgtaatgac aataccatct gccagcgggc cgcctttttt gttatggacc aggatagcat
     6361 ttgacacggc aggcgttggc gtgaagccat tattttcctg cacgataacg tctacgccgt
     6421 ttgccgccag cacttccagc acggaaatga aggccggttc cgagagcgca tgggtgtctt
     6481 tccccacata gcaggggccg gtaatgccat ttttcgcccg ctcttcagca atcgcctggg
     6541 cgatcgccag aatatgcggt tcgttgaaac tgtgacgacc tgcgctgccg cgatggccgg
     6601 aagtgccaaa tttcacggca tgttctgcat tccctgcctc cggtttcagt acataatact
     6661 gcgctgtcag ttgggcgacg ttaatcaaat cactctgttg cgcgggttgt cctgcgcggt
     6721 tgtggattgc cattgcctgg tccttctaat gcaaggatta aattgttccg caaacctttt
     6781 caatcaattc cgccgggaat tgcattgact gcatgatgtg ttcgatcatg ctgcatttac
     6841 ggccggtgtt ggtgttggtg atcacccagt acggcgtgcc gggaacgtgc ttaggtttag
     6901 tttgattccc atttttcagc agcgtttgtt catccgccgc aaaatagacg cgcgtgcggc
     6961 catgcaacga ctccgtcgcc tccgcaaacg cgtggtgatc cagtgaatag agtgtagtca
     7021 gaatcagcat aaagcggttg accgcttttt tctgctcggc atattcatca gacaacaaca
     7081 gctcacgcat cgcgcgaact ttgtctttta ccgggttaac cggtttcgct tcggcaacgg
     7141 gttgcgccgc aggcgtcccc ttcaccgctg aagccgttgg ctgtgtcgtg gcggaaaact
     7201 tcaacatacg ccgtaaaatg tcggatgcgc tctcgccgat atgcttggtg tggctggcaa
     7261 tatagctata gagttcatca tcaacttcaa tcgttttcat cttaatccag tgcgatgtct
     7321 ttgctgaata caagtcattg ggattatagg aacaaatccc aacagcggat agcgttaagc
     7381 ccggctgaca aaaaaactcg gagtaaacct tagaggttgc agcccagtgg cagaatggtc
     7441 aacataatac cctaacccga cagagcgaaa aaaagaactt tgccatgaaa ttaaacatcc
     7501 gagcgcaatc tgcacaaaac ctgcacaata attcccccat cgttctcgtt catggcctgt
     7561 ttggcagcct ggacaacctc ggcgtactgg cgcgcgatct ggtgaccgat cacgacatta
     7621 ttcaggtcga tatgcgcaat catggtttat cgccgcgcga tccggtcatg gattatccgg
     7681 caatggccca ggatcttctg gatacgcttg acgcgcagca gattgaaaaa gcgacgttta
     7741 ttggtcattc catgggtgga aaagcggtaa tggcgctgac ggcgctggcg cccgatcgca
     7801 tcgatcgtct ggtcgcgatt gatatcgccc ccgtggatta tcacgttcgc cgccacgatc
     7861 gcattttcgc ggccattaac gccgtcagcg aatccgacgc gacatcccgc caacaggcgg
     7921 cagggattat gcgccagcac ctcaacaaag aaggcgtgat ccagtttctg ttaaaatcct
     7981 gggctgaagg cgaatggcgt tttaatgttc cggtattatg ggagcagtat ccgcatatcg
     8041 tcggctggga aaccattccg ccctgggaac atccggcgct gtttattcca ggcggtaact
     8101 cgccgtacgt gaccgaagcg taccgcgacg cgctgctggc gcaattccct ttggcgcgcg
     8161 cgcatgtgat cgccggcgcg ggccactggg tacatgccga aaaa
//
LOCUS       DAGWFR010000172         8147 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.174, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000172 DAGWFR010000000
VERSION     DAGWFR010000172.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 8147)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8147)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8147
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.174"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(50..1234)
                     /gene="torC"
                     /locus_tag="MOX77_003831"
     CDS             complement(50..1234)
                     /gene="torC"
                     /locus_tag="MOX77_003831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentaheme c-type cytochrome TorC"
                     /protein_id="HCA3359239.1"
                     /translation="MRKLWRALLRPSTRWSILALVIVGIVIGVALIVLPHVGIKLTST
                     TEFCVSCHSVQPVYQEYKQSVHFQNASGVRAECHDCHIPPDIPGMVKRKLEASNDLYQ
                     TFIAHSIDTPEKFEAKRAELAEREWARMKENNSATCRSCHNYDAMEHAKQNPEAARQM
                     KIAAKENQSCIDCHKGIAHQLPDMSSGFRKQFDELRASASTHNDGDTLYSLDIKPIYA
                     AKGDKEPAGSLLPASEVKVLKRDGDWLQVQIEGWTETDGRQRVLTQLPGKRIFVASIR
                     GDVQQHVKTLEETTVAATNTQWSKLQATAWMQKGDMVNDIKPIWAYADSLYNGTCNQC
                     HGAPDKAHFDANGWIGTLNGMIGFTSLDKRDERTLLKYLQMNASDTTNTPHSDKGEHN
                     EK"
     gene            1364..2058
                     /gene="torR"
                     /locus_tag="MOX77_003832"
                     /pseudo
     CDS             1364..2058
                     /gene="torR"
                     /locus_tag="MOX77_003832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462724.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator TorR"
     gene            complement(2031..3071)
                     /gene="torT"
                     /locus_tag="MOX77_003833"
     CDS             complement(2031..3071)
                     /gene="torT"
                     /locus_tag="MOX77_003833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TMAO reductase system periplasmic protein TorT"
                     /protein_id="HCA3359240.1"
                     /translation="MRTLISFFFLIIIVSNVETASAETGLLHWTRADRAIPWRQTSVN
                     ASKPWKLCALYPSLKDSYWLSVNYGMQKAAKLYGVDLKVLEANGYRQLATQQQQMTQC
                     REWGADAILLGSSTDRFPELERYAGNVPVIELVNMIHDASVATRIGLPWFQMGYLPGR
                     FLVQWSKGKTLNVLLFPGPEEAGGSQEMVAGFRQAIKGSAINIVDIAWGDNDIEVQRN
                     LLQEMLERHPDANVVAGSAIAAEAAMGEGRNLTTPLTIVSFYLTHQVYRGLKRGHILM
                     ALSDQMAWQGELAITQSIKVLQGQPVPENISPPVLILTHNNADSARVRRSLSPPGFRP
                     VYLYQYTSEAKK"
     gene            3151..5886
                     /gene="torS"
                     /locus_tag="MOX77_003834"
     CDS             3151..5886
                     /gene="torS"
                     /locus_tag="MOX77_003834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TMAO reductase system sensor histidine
                     kinase/response regulator TorS"
                     /protein_id="HCA3359241.1"
                     /translation="MSTPSLTHRLWLAFALMAALTLLSTVIGWISLRVISQVEQTNTQ
                     ALLPTMNMARQLSEASAYELFSAQNLTNADSEGVWLAQGKMLKAQSLKINHLLQALSE
                     QGFNTSAIARQEKEIAQTLGQQGTLVGEILTLRAQQQQLSRQIAEAAESIAAQAHGQA
                     NNAATSAGATQAGIYDLIESGKGDQAERALDRLIDIDLEYVNQMNELRVNALRFKQLI
                     VTLKDAQGLSDAEETDEKLNQLVKILSRRQQRIEDPTVRAQIADALGKINQYTTLVTL
                     FRKENAIRDQLQTLMANNLFQFTRFSTEVSQLVNAIEKRNEAGLARLTHASQRGQIGL
                     VILGILALCSLSFILWRVVYRSVSRPLAQQTQALQRLLEGDIDSPFPEAAGVSELDTI
                     SRLMEAFRANVRKLNRHREDLAEQVRSQTAELHALVLEHRQARAEAEKANEAKSTFLA
                     AMSHEIRTPLYGILGTVQLLADKPLMANYRDDLQAINDSGESLLAILNDILDYSAIEV
                     GGTNVSISEEPFEPRQLLNSALHLMHSRVQVALITDFSEQLPSTLQGDPRRIRQIVIN
                     LLSNAAKFTDRGSIVLRTFCDDQSWFIEVEDTGCGIPEAKLTAIFKPFVQATGCRGGT
                     GLGLAISASLAEAMGGTLTVTSTLHVGSCFRLQLPVRHPKPASKSAFREPVNLNGLRL
                     LLIEDNMLTQRITAEMLTGKGVKVSVAESANDALRCLAEGEPFDVALVDFDLPDYDGL
                     TLAQQLMSLYPAMKRIGFSAHVIDDNLRQRTAGLFCGIIQKPVPREELYRMIAHYLQG
                     KSHNARVMLNEHQLAGDMASVGPEKLRQWVALFKDSALPLVEEIEAARAMNDDVNIKR
                     LAHKLKSGCASLGMTQATEACRELELQPLSDIDIKTIVTQGVTALDAWIAGHPSP"
     gene            complement(5991..7118)
                     /locus_tag="MOX77_003835"
     CDS             complement(5991..7118)
                     /locus_tag="MOX77_003835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006762570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4056 domain-containing protein"
                     /protein_id="HCA3359242.1"
                     /translation="MRTIVRVIFLALLFLAGSARAALPLTLYLSTLPMPAASEAWPTM
                     PPQPLPKGLRPCCAFGYDLHAELLGLPVPFYQLNNVVTVDSLGHHQYNDHLYSGVANL
                     IGLSGENNGIVYTLRGGFIDTAHVRDTADMTVYIFSQLLPKLGQAFTLNLGEELAERR
                     LVFTAFTPPVDARERYTLAAWLSAHLAFQVAEWHEIAQWYGFESVRGFSEGVSAFSPE
                     DLYSNLAGARLAASLIVDGQTKTQEMYNTAMETALRQALTQLAAQPAQITRFQFDMLD
                     GRWWNSQRRVPEKYLVLHRNYQMGDDRLPTAVPGEITSLLPLSLPHRWRGIQLSTLAQ
                     LQLWPSEDMAQLPPPAHYYSEKDFAALAEQARLQDEKTQNH"
     gene            complement(7115..8146)
                     /locus_tag="MOX77_003836"
     CDS             complement(7115..8146)
                     /locus_tag="MOX77_003836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001749947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HCA3359243.1"
                     /translation="MGDSDTYDAAKGVNWGVMPGPFYTPELGLGIGTAIVGMYRPDPA
                     DKVSQISTLSLSGYFSSTGAFGVSLQNYAFFAQDRWRFFLTGALSDTPTYYWGQGFAA
                     GDKDSHKQAYTAQVLDLQPMLYRRLVNNIYLGVGWTLDVQHAAQINEDDPPRIQHTAQ
                     GGSSLSNGGSVEISWDDRDFMPNPRKGQYATLRYTHFAPDIGSDTRFDEYQLHYSQYH
                     AVDDKDVLAWEADGAFTQGYVPWNMLPLLGSNHRMRGYYEGRYRDKNAVSGQLEYRHK
                     LSWRHGVVGWVGAGTMGSSLHHLDDGRWLPSAGVGYRFEFKPRVNVRLDYGVGKGSSG
                     FYFQVGEAF"
BASE COUNT         1870 a         2250 c         2220 g         1807 t
ORIGIN      
        1 gccgccaagc tgcgccagaa aacgtcgacg agagacgtgt aacgagtcct tatttttcat
       61 tgtgttctcc cttatcgctg tgcggcgtgt tggtggtatc agacgcattc atctggagat
      121 atttcaacaa ggtacgttca tcacgcttat ccagactggt gaaaccgatc atgccgttga
      181 gcgtgccgat ccagccgtta gcgtcaaagt gcgctttgtc cggcgcaccg tgacactgat
      241 tacaggtgcc gttatagagg gagtcggcat aggcccaaat cggtttaatg tcatttacca
      301 tgtcaccttt ttgcatccac gcggttgcct gtaatttgct ccactgagta ttggtcgccg
      361 cgacggtggt ctcttccagc gttttcacat gctgttgcac atcgccgcga atcgaggcga
      421 caaaaatacg tttaccgggc aactgcgtca gcacgcgctg gcgaccgtcc gtctccgtcc
      481 agccttcgat ttgcacttgc agccagtcac cgtcccgttt aaggactttc acttcagaag
      541 caggcaacag cgaacctgcc ggttctttat cgcctttagc ggcgtaaatc ggcttgatat
      601 ccagcgaata gagcgtatcg ccgtcattat gcgtactggc gctggcgcgc agttcatcaa
      661 actgtttgcg gaaaccgctg ctcatatccg gtagctggtg ggcaatccct ttatggcagt
      721 cgatgcagga ttgattttct ttcgcggcga ttttcatttg ccgcgccgct tccgggttct
      781 gtttcgcgtg ctccatcgca tcgtagttat ggcaggaacg acaggtcgcg gagttattct
      841 ctttcatgcg cgcccattct cgctcggcaa gctcggcgcg tttagcttca aatttttccg
      901 gggtatcaat cgagtgggcg ataaatgtct ggtaaagatc gttgctggct tccagcttac
      961 gtttcaccat gcctggaata tcggggggga tatggcaatc gtggcattcc gcgcgtacgc
     1021 cggaagcgtt ctggaaatgt acggactgtt tatattcctg atacaccggc tgcacactat
     1081 ggcagctgac gcaaaactct gtcgtactgg tcagtttgat accgacgtga ggtaacacga
     1141 tcagcgcaac gccgatcaca atcccgacaa tgaccagcgc cagtatcgac caacgggtgc
     1201 ttggcctgag taacgctctc cagagttttc gcataatagc ccctgtaatt atatggttta
     1261 atgcgcagat cttattccgc aaatatgaac agcgtcactg gtcaggatga acgggatacg
     1321 gcaatatatg aacagatatg aacagaaaga gaccgcgcgc aggatgtcac atcacattgt
     1381 tattgttgag gatgaacctg ttactcaggc caggttacag gcctattttg agcaggaggg
     1441 gtatcgcgtt tcggtgaccg acagcggcgc gggcctgcgc gtgacatcat ggagcatgag
     1501 cacgtttcgc tgatcctgct ggatatcaac ctccccgatg aaaacgggtt gatgctgacc
     1561 agggcgctac gcgaacgctc cacggtgggc attattctgg tgacggggcg ttgcgaccaa
     1621 atcgaccgca tcgtcgggct ggagatgggc gcggacgact acgtcaccaa gccgctggaa
     1681 ctgcgcgagc tggtagtgcg ggtgaaaaat cttttgtggc gtatcgatct ggcccgcccc
     1741 acgccgcaaa atgccagtga aaactgctat atgttttccg gctactgcct gaacgtgatg
     1801 aatcacacgc tggagcacaa cggtgaagcc attaagctta cgcgcgcgga gtacgagctg
     1861 ctgctggcct ttgtgaccaa cccaggcaaa gtgctgcatc gcgaacgtct gctgcgaatg
     1921 ctttccgccc gccgcgtaga gaccccggat ctccgcacga ttgatgtcct ggttcgccgc
     1981 ttacgtcata aaattacgcc ggaactgctg gtcacacagc atggcgaagg ctacttttta
     2041 gcctcggagg tgtattgata cagatagacg ggccgaaatc ccggaggcga tagcgaacgg
     2101 cgaacgcgcg cgctgtcggc gttgttatgc gtcaaaataa gtaccggcgg gctgatattt
     2161 tcaggcaccg gttgcccctg taagacctta atcgactgcg ttatcgctaa ttctccctgc
     2221 caggccatct gatcgctgag cgccatcagg atatggccgc gttttaaacc gcgataaact
     2281 tgatgcgtca gataaaatga gacgatcgtg agcggagtcg tcaaatttcg cccttcgccc
     2341 atcgccgcct ccgccgctat cgccgacccg gcgaccacat tggcgtccgg atggcgttcc
     2401 agcatttcct ggagtaagtt tcgctgcact tcaatgtcgt tatcgcccca ggcgatatcc
     2461 acaatgttga tggcgctgcc tttaattgcc tgacgaaaac ccgccaccat ctcctgactg
     2521 ccgccggctt cttccggccc cgggaagagt aaaacgttaa gcgtttttcc tttgctccac
     2581 tgcaccagga aacgtcccgg cagataaccc atctgaaacc acggcagacc aatgcgggtt
     2641 gcgacgctgg catcgtgaat catgttcacc agttcaataa ccggcacatt accggcatat
     2701 cgttccagct ccgggaaacg atcggtactg ctgccaagca gaatagcgtc ggcgccccac
     2761 tcccggcact gcgtcatttg ctgttgttgc gtcgccagtt gccgatagcc attcgcttcc
     2821 agcactttta aatcaacgcc atacaatttg gccgcttttt gcatcccgta gttgacggac
     2881 aaccagtaag aatctttcag gctggggtat aatgcgcaca gtttccaggg tttactcgca
     2941 ttgactgacg tttgccgcca gggaatcgcc cgatcggcgc gcgtccagtg tagcaacccg
     3001 gtttcggctg acgccgtttc tacattcgag acgatgatta tcaaaaaaaa gaacgaaata
     3061 agcgtgcgca tgatagcccc accagcaaca aggttttatc ctaatggttt ttccggcggc
     3121 aactcaaccc atttcacccg cggcgcataa atgtcaacgc cttcactgac ccacagatta
     3181 tggctggcct tcgctctgat ggcggcactc accctgctca gcaccgtgat cggctggata
     3241 agcctgcgcg tcattagtca ggtggagcaa accaatacgc aagcgctgct ccccacgatg
     3301 aatatggcca ggcagttaag cgaagccagc gcttacgagc tcttttccgc gcaaaatctg
     3361 accaatgccg acagcgaggg cgtttggctg gcgcagggga agatgctgaa agcgcaaagc
     3421 cttaaaatta accatctttt gcaggcatta agcgagcagg ggtttaatac ctcggccatc
     3481 gcccggcaag aaaaagagat tgcgcaaacg cttgggcagc agggaacgct ggtcggtgaa
     3541 attctcacgc tgcgcgcaca gcaacagcag ttaagccgcc agattgcgga ggcggcggaa
     3601 agcattgccg cccaggctca cggtcaagcc aataatgcag cgacatctgc gggcgccacc
     3661 caggccggta tttacgatct tatcgaaagc ggtaaagggg atcaggctga acgcgcgctt
     3721 gaccgactga ttgatatcga ccttgagtat gtgaatcaga tgaatgagtt gcgggtcaat
     3781 gccctgcggt ttaagcagct cattgtgacc ttaaaagacg cgcaagggct gagcgatgcc
     3841 gaggaaaccg atgaaaaact taatcagttg gttaaaattt tatcccgccg ccagcagcgt
     3901 atagaagatc ctaccgttcg cgcccaaatc gccgacgcgc tggggaaaat aaaccagtac
     3961 acgacactgg ttaccctgtt tcgtaaggaa aacgccatcc gcgaccagct tcaaacgctt
     4021 atggccaata acctctttca gtttacccgc ttcagtacgg aagtgtcgca gttggtgaac
     4081 gccatcgaaa aacgaaacga ggctgggtta gcgcgtctta cacacgccag tcagcgtggg
     4141 caaatagggt tagtgatctt aggtatcctg gcgctgtgct cattaagttt tattctttgg
     4201 cgagtggttt accgttccgt atcccgcccg ctggcgcaac aaacgcaggc cttacagcgg
     4261 ctactggagg gcgatattga ctcgccgttt ccggaggcgg ctggcgtcag cgaactggat
     4321 accatcagcc gtctgatgga agcgtttcgc gccaacgtgc gcaaattgaa ccgccatcgt
     4381 gaggatttgg cggaacaggt gcgatcgcaa acggcggagc ttcatgcgct ggtgctggaa
     4441 caccggcagg cgcgcgccga agcggaaaag gccaacgagg cgaaatcgac gttccttgcc
     4501 gccatgagcc atgaaattcg cacgccgctt tacggcattc tcggtacggt acaattgctg
     4561 gccgataaac cgctcatggc aaactaccgc gacgatttac aggccattaa tgattcaggc
     4621 gaatcgctac tggcgattct taacgatatt cttgattact cggcgattga agtaggcggc
     4681 accaacgttt ccattagcga ggaaccgttt gaaccgcgac aattgttgaa tagcgcgctg
     4741 catttaatgc acagccgcgt gcaggtggcg ctcatcaccg actttagcga gcaactccct
     4801 tccacgctac aaggcgatcc gcgccggata cgtcaaattg tgattaatct tttaagtaat
     4861 gcggcgaaat ttaccgatcg cggcagcata gtgctgcgca cgttttgcga cgatcagagc
     4921 tggtttattg aggttgaaga taccggatgc ggtatccctg aagcgaagct gacggctatt
     4981 ttcaaaccgt ttgtgcaggc gacaggatgc cggggcggga cgggcctggg gctggctatc
     5041 agcgccagcc tggcagaggc gatgggcggg acgctaaccg tcaccagtac gcttcatgtt
     5101 ggcagttgtt ttcgcttaca actgccggtt cgccacccca aacctgcaag caaaagtgcg
     5161 ttcagggaac cggtaaatct taacggacta cgcctgttgc tgattgaaga taatatgctg
     5221 acgcagcgta ttaccgctga aatgctcacg ggtaaagggg tgaaggtctc agtagctgaa
     5281 agcgcgaatg acgcgctacg ctgtttagcc gaaggcgagc cctttgatgt ggcgctggtg
     5341 gattttgatt taccggatta tgacggctta accctggcgc agcagttgat gagcctgtat
     5401 cccgccatga aacgcattgg ttttagcgcg catgtgatag acgataatct tcgtcagcgt
     5461 accgccggtc ttttctgcgg gattattcaa aagcccgttc cccgcgagga gctttaccgc
     5521 atgatagcgc actatttaca gggcaaatct cacaacgcgc gggtgatgtt gaatgaacat
     5581 cagcttgccg gcgatatggc gtctgtcggc ccggaaaagc tccggcaatg ggtcgcctta
     5641 ttcaaagaca gcgcgctgcc tttagtcgag gagatcgagg cggcgcgcgc catgaatgac
     5701 gacgttaaca ttaagcggct ggcgcataaa ttaaaaagcg gctgcgccag cctggggatg
     5761 acgcaggcaa ccgaagcctg tcgggagctg gaattgcaac cgcttagcga tatagatatt
     5821 aaaactatcg tgacgcaggg agtgacggcg ctcgacgcat ggatagccgg tcatccttcg
     5881 ccatgatgat ttccggctcg ccaaacgacg cgtttcacat cgccagttat caggacataa
     5941 aacagtacgc cgagggtata agagggaaat agcctacggc taccgcctgt ttaatgattc
     6001 tgtgtttttt cgtcctgtag ccgtgcctgc tccgccaggg cggcaaaatc tttttcgctg
     6061 taatagtgcg cgggaggcgg tagctgcgcc atatcctcgc tgggccacaa ttgtagctgc
     6121 gccagcgtgc taagctggat accgcgccag cgatggggca agctcagcgg caatagcgac
     6181 gttatctcgc caggaaccgc ggtcggcagg cggtcatcgc ccatctgata attacgatgc
     6241 agcaccagat atttttccgg tacccgccgc tggctgttcc accaacgacc atcaagcata
     6301 tcaaactgaa aacgggtgat ctgcgccggc tgcgctgcca gctgcgtcag cgcttgccgc
     6361 agcgcagttt ccatcgccgt gttgtacatc tcttgcgttt tcgtctggcc gtcgacaatt
     6421 aaagacgccg ccagacgggc acccgcgagg ttagaataga gatcttccgg cgaaaaggcc
     6481 gatactccct cagaaaatcc gcgaacggac tcgaaaccgt accattgggc gatttcgtgc
     6541 cactccgcca cctggaacgc cagatgcgcc gacagccagg cggccagcgt gtaacgctcg
     6601 cgtgcatcga ccggaggggt aaaagcagta aagaccagac gccgttcggc cagctcctcg
     6661 cccagattca gcgtaaaagc ctgccccagc tttggtagta gttggctgaa gatatacact
     6721 gtcatatcag cggtatcccg cacatgtgcg gtgtcgatga atccgccacg caaggtatac
     6781 acaataccgt tattctcacc gctaaggccg atcaggtttg ccacgcccga gtacagatgg
     6841 tcgttgtact gatgatgccc cagcgagtct accgtcacga cgttatttaa ctgataaaac
     6901 ggaaccggca gtcccagcag ctcggcatgc aggtcgtaac caaaagcgca acacggacgc
     6961 aacccctttg gcagcggctg tggcggcatc gttggccagg cttcactggc agcaggcatt
     7021 gggagcgtgg acagatagag cgtcagtggt aaggcggcgc gggcgctccc cgccagaaac
     7081 agcagcgcca gaaagataac ccgaacgata gtcctcaaaa tgcctctcct acctgaaaat
     7141 aaaaaccgct gctgcctttg cccacgccgt aatccagccg cacgttgacg cgcggcttga
     7201 actcaaagcg atagcccacg cccgcagaag gcagccatcg cccgtcatcc agatggtgca
     7261 aagacgatcc catggtgccc gctcccaccc aaccgacaac gccatgccgc cagctcaact
     7321 tatggcgata ttccagttgg ccactgacgg cgtttttatc gcgatagcgc ccttcataat
     7381 agccgcgcat acgatggtta ctgcccagca gcggcagcat attccatggc acgtagccct
     7441 gggtaaaggc accgtcagct tcccaggcca gcacgtcttt atcatcaacg gcgtggtatt
     7501 gactgtagtg caactggtat tcatcgaacc gcgtatcgct accgatgtct ggcgcgaagt
     7561 gggtatagcg aagggtggca tactgtcctt tgcgtgggtt aggcataaaa tcacggtcgt
     7621 cccaactaat ctcaacgcta ccgccgttac tcagtgaaga accgccctgc gctgtatgtt
     7681 gaattctggg cggatcgtcc tcattgattt gcgcggcgtg ctgtacatcc agcgtccagc
     7741 caacgccaag atagatattg ttgaccagcc gacgatacag catgggttgc agatccagca
     7801 cctgcgcggt ataggcctgc ttatggctgt ctttatcacc ggcggcaaaa ccctgccccc
     7861 aatagtaagt gggcgtgtcg ctcaatgcgc cagtaaggaa gaaacgccag cgatcttgcg
     7921 cgaaaaaggc gtaattttgc aggcttacgc cgaaagcgcc cgtggagcta aaatagccgc
     7981 tcagcgacag cgtggatatc tggctaacct tatcggcagg atcggggcga tacataccga
     8041 caatggcggt gccgatgccc agccccagtt caggggtata aaatggcccg ggcattactc
     8101 cccagttgac gcctttggcg gcatcgtaag tatcgctatc ccccatt
//
LOCUS       DAGWFR010000173         8138 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.175, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000173 DAGWFR010000000
VERSION     DAGWFR010000173.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 8138)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8138)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8138
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.175"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..133)
                     /locus_tag="MOX77_003837"
     CDS             complement(<1..133)
                     /locus_tag="MOX77_003837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459584.1"
                     /note="with FepBCG is involved in the transport of ferric
                     enterobactin; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+)-siderophore ABC transporter permease"
                     /protein_id="HCA3359244.1"
                     /translation="MSCSFSVTRAFAVPGLLLLLSLAAVLSLVIGAKPLPAAVVLEAF
                     "
     gene            244..1488
                     /gene="entS"
                     /locus_tag="MOX77_003838"
     CDS             244..1488
                     /gene="entS"
                     /locus_tag="MOX77_003838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterobactin transporter EntS"
                     /protein_id="HCA3359245.1"
                     /translation="MNRQSWLLNLSLLKTHPAFRAVFLARFISIVSLGLLGVAVPVQI
                     QMMTHSTWQVGLSVTLTGGAMFIGLMVGGVLADRYERKKVILLARGTCGIGFIGLCVN
                     ALLPEPSLLAIYLLGLWDGFFASLGVTALLAATPALVGRENLMQAGAITMLTVRLGSV
                     ISPMLGGILLASGGVAWNYGLAAAGTFITLLPLLTLPRLPVPPQPRENPFIALLAAFR
                     FLLASPLIGGIALLGGLVTMASAVRVLYPALAMSWQMSAAQIGLLYAAIPLGAAIGAL
                     TSGQLAHSVRPGLIMLVSTVGSFLAVGLFAIMPIWIAGVICLALFGWLSAISSLLQYT
                     LLQTQTPENMLGRMNGLWTAQNVTGDAIGAALLGGLGAMMTPVASASVSGFGLVIIGL
                     LLLLVLGELRRFRQTPPVSDAG"
     gene            complement(1551..2507)
                     /gene="fepB"
                     /locus_tag="MOX77_003839"
     CDS             complement(1551..2507)
                     /gene="fepB"
                     /locus_tag="MOX77_003839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe2+-enterobactin ABC transporter
                     substrate-binding protein"
                     /protein_id="HCA3359246.1"
                     /translation="MRLSAFYRWLLLVVGLSISGISLAQDAGWPRQIQDSRGVHTLDH
                     KPARIVSTSVTLTGSLLAIDAPVVASGATTPNNRFADDQGFMRQWSDVAKARHVARLY
                     IGEPNAETVAAQMPDLILISATGGDSALALYDQLSAIAPTLVINYDDKSWQSLLTQLG
                     EITGQEKQAAARIAEFEAQLTTVKQRIALPPQPVSALVYTPAAHSANLWTPESAQGKL
                     LTQLGFTLATLPQGLQTSKSQGKRHDIIQLGGENLAAGLNGESLFLFAGDNNDVAALY
                     ANPLLAHLPAVQNKRVYALGTETFRLDYYSATLLLNRLAALF"
     gene            2815..3990
                     /gene="entC"
                     /locus_tag="MOX77_003840"
     CDS             2815..3990
                     /gene="entC"
                     /locus_tag="MOX77_003840"
                     /EC_number="5.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismate synthase EntC"
                     /protein_id="HCA3359247.1"
                     /translation="MDMSLAEDAQETMATLAPDRFFFMSPYRSFTTSGCFARYTEPAV
                     AGDSPDSPFQQKLRQQFAEAKSQGIANPILVGAIPFDTRQPSSLFIPMAWQSFSRQQK
                     QRTARYFTDHQPLTVTARKAIPEQDAFEAMVARAAMLTATPDVDKVVLSRLIDITTDV
                     AVDSGALLERLVAQNPVSYNFHVPLADGGVLLGASPELLLRKEGERFSSLPLAGSARR
                     QPDDVLDREAGNRLLASQKDRHEHELVTQAMKQILRDRSTELQLPSSPQLITTPTLWH
                     LGTPFEGKANAGENALTLACLLHPTPALSGFPHQVAKKLIAELEPFDRELFGGIVGWC
                     DAEGNGEWVVTIRCAKLHGNQVRLFAGAGIVPASSPVGEWRETGVKLSTMLNVFGLH"
     gene            4000..5610
                     /gene="entE"
                     /locus_tag="MOX77_003841"
     CDS             4000..5610
                     /gene="entE"
                     /locus_tag="MOX77_003841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2,3-dihydroxybenzoyl)adenylate synthase EntE"
                     /protein_id="HCA3359248.1"
                     /translation="MRIPFTRWPDEFARRYREKGYWQDVPLTDILTRHADSDKTAVIE
                     GERAFSYRQLNQAADNLACSLRRQGIKPGETALVQLGNVPELYITFFALLKLGVAPVL
                     ALFSHQRTELNAYAMQIAPTLVIADRQHTLFAGEDFLNRFVAEHRSARVVLLRNDDGD
                     HSLDAAMRQAAEGFTATPSPADEVAYFQLSGGTTGTPKLIPRTHNDYYYSVRRSNEIC
                     GFNEETRFLCAIPAAHNYAMSSPGALGVFLAKGTVVLATDPGATLCFPLIEKHQINAT
                     ALVPPAVSLWLQAIQEWGGNAPLASLRLLQVGGARLSATLAARIPAEIGCQLQQVFGM
                     AEGLVNYTRLDDSPERIINTQGRPMCPDDEVWVADADGNPLPPGEIGRLMTRGPYTFR
                     GYFNSPQHNVSAFDANGFYCSGDLISIDQDGYITVHGREKDQINRGGEKIAAEEIENL
                     LLRHPAVIHAALVSMEDELLGEKSCAYLVVKEPLRAVQVRRFLREQGVAEFKLPDRVE
                     CVASLPLTPVGKVDKKQLRQRLASRSPL"
     gene            5624..6481
                     /locus_tag="MOX77_003842"
     CDS             5624..6481
                     /locus_tag="MOX77_003842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase"
                     /protein_id="HCA3359249.1"
                     /translation="MAIPKLQSYALPTALDIPTNKVNWAFEPERAALLIHDMQDYFVS
                     FWGRNCPMMDQVIANIAALRQYCKEHHIPVYYTAQPKEQSDEDRALLNDMWGPGLTRS
                     PEQQKVVEALTPDEADTVLVKWRYSAFHRSPLEQMLKDTGRNQLIITGVYAHIGCMTT
                     ATDAFMRDIKPFMVADALADFSREEHLMALNYVAGRSGRVVMTESLLPTPIPASKAAL
                     RALILPLLDETDEPLDDENLIDYGLDSVRMMGLAARWRKVHGDIDFVMLAKNPTIDAW
                     WALLSRGVE"
     gene            6481..7236
                     /gene="entA"
                     /locus_tag="MOX77_003843"
     CDS             6481..7236
                     /gene="entA"
                     /locus_tag="MOX77_003843"
                     /EC_number="1.3.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase
                     EntA"
                     /protein_id="HCA3359250.1"
                     /translation="MASFDFSDKTVWVTGAGKGIGYATALAFVDAGARVIGFDREFTQ
                     ENYPFATEVMDVADAAQVAQVCQRVLQKTPRLDVLVNAAGILRMGATDALNVDDWQQT
                     FAVNVGGAFNLFSQTMAQFRRQQGGAIVTVASDAAHTPRIGMGAYGASKAALKSLALT
                     VGLELAGCGVRCNVVSPGSTDTDMQRTLWVSEDAEQQRIRGFGEQFKLGIPLGKIARP
                     QEIANTILFLASDLASHITLQDIVVDGGSTLGA"
     gene            7239..7652
                     /gene="entH"
                     /locus_tag="MOX77_003844"
     CDS             7239..7652
                     /gene="entH"
                     /locus_tag="MOX77_003844"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proofreading thioesterase EntH"
                     /protein_id="HCA3359251.1"
                     /translation="MIWKRHLTLDELNATSQNTLVAHLGIVYTRLGDDVLEAEMPVDA
                     RTHQPFGLLHGGASAALAETLGSMAGYLMTRDGQCVVGTELNATHHRAVSQGKVRGVC
                     LPLHLGRQNQSWEITLFDEQGRRCCTCRLGTAVMG"
     gene            7834..>8138
                     /locus_tag="MOX77_003845"
     CDS             7834..>8138
                     /locus_tag="MOX77_003845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation protein A"
                     /protein_id="HCA3359252.1"
                     /translation="MNKSGKYLVWTALSVLGAFALGYIALNRGEQINALWIVVASVCV
                     YLIAYRFYGLYIAKKVLAVDPTRMTPAVRHNDGLDYVPTDKKVLFGHHFAAIAGAGPL
                     "
BASE COUNT         1713 a         2121 c         2463 g         1841 t
ORIGIN      
        1 tgaacgcctc cagcacgacg gcggcgggca gcggtttcgc gccaatgacc aggcttaaaa
       61 ccgcggcgag actcagtaat aacaacaatc cgggcacggc aaacgcgcgc gtcacggaaa
      121 acgagcatga catagtaact tccctgataa tgatagtaat tatcgttatc tatcttattt
      181 ggttatatta gcatgtgcag ccattgaatg gatatttaaa aaaactcgca ttaaggcgtt
      241 gtaatgaatc gacaatcctg gctgctcaat ctcagcctgt tgaagacgca ccctgcattt
      301 cgcgcagtat ttctggcccg ttttatctct attgtctcgc tggggctgct tggcgtggcg
      361 gttccggtac agatccaaat gatgacgcac tctacctggc aggtagggct gtcggtaacg
      421 ttaaccggcg gcgccatgtt tattggctta atggtgggcg gcgtactggc cgatcgctac
      481 gaacgcaaaa aggtgattct gctggcgcgc ggtacttgcg gtattggctt tattggtctg
      541 tgcgtgaacg cgctgctgcc ggaaccgtca ttgctggcga tatatctcct tggcctgtgg
      601 gacggctttt tcgcgtctct gggcgtgacc gcgttactgg cggcgacgcc agcgctggtc
      661 ggaagagaaa atctgatgca ggccggcgcg attaccatgc tgacggtacg tctgggatcg
      721 gttatttcgc cgatgttggg gggcatattg cttgccagcg gcggcgtagc ctggaactat
      781 gggctggcgg ccgccgggac gtttattacg ctattgccgt tactgacgct gccgcgactg
      841 cctgttcctc cgcagccgcg ggaaaatcca tttatcgcgt tactggcggc atttcgtttt
      901 ttgctcgcca gtccgcttat cggcggtatt gcgctgcttg gcggcctggt gacgatggca
      961 agcgcggtac gcgtcctcta tccggcgctg gcgatgagct ggcagatgtc ggcggcgcaa
     1021 atcggtttgc tgtatgcggc aattccgctg ggggcggcca ttggcgcgct gaccagcgga
     1081 caactggcgc atagcgttcg tccggggctc attatgctgg tttcgacagt cggttctttt
     1141 ctggcggtgg ggctgttcgc catcatgccg atctggatcg ctggtgttat ctgtctggcg
     1201 ctatttggct ggcttagcgc catcagttcg ttattacaat acactctgct gcaaacccag
     1261 acgccggaaa atatgctggg gcgaatgaac ggcctgtgga ccgcgcaaaa cgtcacggga
     1321 gacgctatcg gcgcggcgct gttaggcggt cttggcgcaa tgatgacgcc ggtcgcttcc
     1381 gcgagcgtga gtggattcgg gctggtgatt atcggtttgc tgctgctgtt agtgctgggc
     1441 gagctacgcc gttttcgcca gacgccgccg gttagcgatg ctggctgatg aagacgcgtt
     1501 tatccgactg accaaatctg tctggtcagt cggataagac tccgataagg ctaaaacagg
     1561 gcggccagtc gattaagcag caacgttgcg ctgtaataat ccagacggaa cgtctccgta
     1621 cccagggcat agacgcgctt attttgcacc gctggcaggt gcgccagcag cggattggcg
     1681 taaagggccg caacatcgtt gttgtcgccg gcaaacagga aaagagattc gccgtttaac
     1741 ccggcggcca gattttcacc gccaagctga atgatatcgt ggcgcttacc ctggcttttg
     1801 ctggtttgca gcccttgggg caatgtcgcc agcgtaaagc ctaactgcgt caatagcttg
     1861 ccttgtgctg attctggcgt ccacagattg gcgctatgcg cggcaggagt atacaccagc
     1921 gcgctaaccg gctgcggcgg cagggcgatt cgctgtttaa ccgtcgtcag ttgcgcctca
     1981 aattccgcta ttcgcgcggc ggcctgtttc tcctgaccgg tgatctcgcc aagctgcgtg
     2041 agcaaactct gccagctttt atcgtcataa ttgatgacga gtgtcggcgc gatggcggag
     2101 agctgatcgt aaagcgccag cgcggagtcg ccgccggtgg cgctaatcaa aatgagatcc
     2161 ggcatttgcg cggcgaccgt ttcggcattc ggttcgccga tgtacagccg ggcgacatgg
     2221 cgagcctttg ctacatcgct ccactggcgc ataaaccctt gatcgtcggc aaaacggtta
     2281 ttcggcgtag tggctccgct ggcgacgacg ggcgcatcaa tcgccagcag cgagcctgtt
     2341 aacgtcacgc tggtagagac gatacgcgcg ggtttgtggt ccagagtatg aacgcctcgg
     2401 ctgtcctgga tttgccgggg ccaaccggcg tcctgggcta aggatattcc tgaaattgat
     2461 aaaccaacca ctaaaagcag ccaacgataa aaggcggaga gtctcacaat agcgtcctgt
     2521 tattaataaa gttaatgctt ctcattttca tgtcagcggc agcgagatgc aagccttagt
     2581 gccatttaac tcatgaccag agttgacaga gcgacgtttt actcttaggt tagcgcacta
     2641 aaaatagaaa taataatcat tattatacac aaaatcattc aagaagcatc gcgacggcaa
     2701 gggaagaatc cccgcgggca tagataactg tgtgaccggg gtttctgatc gcagccaaca
     2761 aagaggcagc ttgaaagatg aagtgtatat aagcctttat cattggagga tgatatggat
     2821 atgtcactgg ccgaggacgc tcaggagaca atggcaacgc ttgctcccga tcgctttttc
     2881 ttcatgtcgc cgtatcgcag ttttaccact tccgggtgct tcgcccgtta taccgagcct
     2941 gcggttgccg gagattcgcc ggatagccct ttccagcaga aattgcgcca gcagtttgcc
     3001 gaggccaaat cgcagggcat cgccaaccct atcctggtgg gggcgatccc ctttgatacc
     3061 cgtcagccgt cgtcgctatt tatcccgatg gcgtggcagt ccttttcccg ccagcaaaag
     3121 cagcgcacgg cgcgttattt tactgaccat cagccgctga cggtgacggc gcgaaaggcg
     3181 attccggagc aggatgcttt tgaagcgatg gtcgcacgcg cggctatgct gaccgccacg
     3241 ccagacgtcg ataaagtggt gctttcccgg ctgatagata tcaccactga tgtggcggtg
     3301 gatagcggag cattgctgga gcggctggtt gcgcagaatc cagttagtta caacttccat
     3361 gtgccactgg cggatggcgg cgttctgctg ggcgccagcc ccgaattgct gctacgcaag
     3421 gagggcgagc ggtttagttc gctgccgtta gcaggctcgg cacgccgaca gcccgatgac
     3481 gttctggatc gcgaggcggg aaaccgactg ctggcttcac aaaaagatcg ccatgaacat
     3541 gagctggtga cgcaggcgat gaagcagatc ctgcgcgatc gcagcacgga actgcaatta
     3601 ccttcctctc cgcagttgat caccacgccg acgctatggc atctcggtac gccgtttgag
     3661 ggcaaggcca acgccggaga aaacgcgctt acgctggcct gtctgctgca tccgacccct
     3721 gcgttaagcg gtttccccca tcaggtcgcg aaaaagctga ttgctgaact ggagccgttc
     3781 gatcgtgaac tgtttggcgg cattgtcggc tggtgcgatg ccgaaggaaa cggcgagtgg
     3841 gtagtgacga ttcgttgtgc gaaattgcac ggtaatcagg tgcgcctgtt cgccggcgcc
     3901 gggattgttc ctgcctcttc gccagtcggc gagtggcggg aaaccggcgt caagctctct
     3961 acgatgttga acgtttttgg actgcattaa ggaacgatga tgcgtatacc tttcacccgt
     4021 tggccggatg aatttgcccg ccgttatcgt gaaaaaggct actggcaaga cgtgccgttg
     4081 accgatattc tgacccgcca cgctgacagc gataagacgg cggtcattga aggcgagcgc
     4141 gcattcagct atcgccagct aaaccaggcc gcggataatc tggcctgcag tttacgccgt
     4201 cagggcatca aacctggcga aaccgctctg gtacaactgg ggaatgtacc ggaactgtat
     4261 atcacctttt tcgccctgtt gaagcttggc gtagcgcccg ttctggcgct gtttagccat
     4321 caacgtaccg aacttaacgc ctatgcgatg cagatcgcgc cgacgctggt gattgccgat
     4381 cgccaacata cgctgttcgc cggggaggac tttctcaaca ggtttgtggc tgaacaccgc
     4441 tctgcgcggg tggtgttatt gcgcaacgac gacggcgatc acagcctgga cgcggcgatg
     4501 cggcaggcgg cggaaggttt caccgccacg ccatcacctg ctgacgaagt ggcctacttt
     4561 cagctttccg gcggtactac cggcacgcca aagcttattc cccgtaccca taacgactat
     4621 tactacagcg tgcgccgcag caatgagatt tgcggtttca acgaggagac gcgttttctg
     4681 tgcgcgattc ccgccgcgca taactacgcc atgagttcgc cgggcgcgct gggcgttttt
     4741 ctcgccaaag gaacggtagt gctggcgacc gatcctggcg ccacgctctg tttcccgctg
     4801 atcgaaaaac accagattaa tgccacggcg ctggtgccgc ccgcggtcag tctatggcta
     4861 caggctatcc aggagtgggg cggcaatgcg ccgctggcgt cattaaggtt attgcaggtt
     4921 ggcggcgcgc ggctttctgc gacgctggcc gcccgtattc cggctgaaat tggctgtcag
     4981 ttgcagcagg tcttcggcat ggcggaaggg ttagtgaact atacccggct ggacgatagc
     5041 ccggaacgga ttatcaatac ccagggaaga cccatgtgtc cggacgacga agtgtgggtg
     5101 gcggatgccg acgggaatcc actgccgccg ggcgagattg gtcgtctgat gacgcgcggc
     5161 ccctatactt ttcgcggcta tttcaacagt ccgcaacaca atgtcagcgc ctttgacgcc
     5221 aacggttttt actgttccgg cgatctgatc tccattgatc aagacggcta catcaccgtt
     5281 cacgggcgtg aaaaagatca gatcaaccgg ggcggcgaga agatagccgc cgaagagata
     5341 gaaaacctgt tactgcgcca cccggcggtg atccatgcgg cgctggtcag catggaagat
     5401 gaactgctgg gggaaaaaag ttgcgcatat ctggtggtaa aagagccgct gcgagcggta
     5461 caggtacgcc gtttcctgcg agagcagggc gtggcggaat ttaaattacc ggatcgcgtg
     5521 gagtgcgttg cgtcactgcc gctgacgccg gttggtaaag tcgataaaaa acaattacgc
     5581 cagcggttgg cgtcacgttc accgctctga aggagaaaga gagatggcaa tcccgaaact
     5641 acagtcttac gcgctgccca ccgcactgga tatcccgacc aacaaagtga actgggcatt
     5701 tgagccggag cgcgcggcgc tgctcatcca cgatatgcag gattactttg tcagcttttg
     5761 gggccgcaat tgcccaatga tggaccaggt aattgccaat atcgccgctc tgcgccagta
     5821 ctgtaaggaa catcatatcc cggtttatta caccgctcag ccgaaagagc aaagcgatga
     5881 agatcgcgcg ttactcaatg atatgtgggg accgggactg acgcgctctc cggaacagca
     5941 gaaggtggta gaagccttaa cgccggatga ggcggatacg gtgctggtga agtggcgtta
     6001 tagcgcgttt caccgctcgc cgctggaaca gatgttaaaa gataccggac gcaatcagct
     6061 catcattacc ggcgtatatg cacatattgg ctgtatgacc accgctaccg atgcgtttat
     6121 gcgcgacatt aagccgttta tggtggcgga tgcgctggcg gatttcagtc gggaagagca
     6181 tctgatggcg ctgaactatg tggcggggcg ttccggtcgc gtcgtcatga cagagtcgct
     6241 gctgccgacg ccgattcctg ccagtaaagc ggcgctgcgg gcgttgattc tgccgttact
     6301 ggatgagacc gacgagccgc tggatgatga aaacctgatt gattatggcc tggattcagt
     6361 acgcatgatg gggctggcgg cgcgctggcg taaagtacac ggcgatatcg acttcgtgat
     6421 gctggcgaaa aatccgacca ttgacgcctg gtgggcgctg ctttctcgcg gggtagagta
     6481 atggccagct ttgatttttc agacaaaacg gtatgggtga ccggggcggg gaaagggatc
     6541 ggttacgcga cggcgctggc gtttgtcgac gccggggcgc gggtgatcgg cttcgatcgc
     6601 gaatttacgc aagagaatta tccctttgct accgaagtta tggatgtggc ggatgccgca
     6661 caggttgcgc aggtgtgcca gcgtgtgttg caaaaaacgc cgcggctgga tgtgctggtc
     6721 aacgccgccg gtattttgcg tatgggagcg accgacgcgc ttaacgtcga cgactggcag
     6781 cagacatttg cggtcaatgt gggcggggca tttaacctgt tttcccagac gatggcgcag
     6841 tttcgccgtc agcagggagg ggcgattgtc accgtagcct cagatgcggc gcatacgccg
     6901 cgtatcggta tgggcgctta cggcgcctct aaagcggcgc tgaaaagcct ggcgctaacc
     6961 gtagggctgg agctggcggg ctgcggggta cgctgtaatg tggtgtcgcc gggctcgacc
     7021 gacaccgata tgcagcgcac gttatgggtg agtgaagatg ccgaacagca gcgcattcgc
     7081 ggtttcggcg aacagtttaa gctcggcata ccgctcggta aaatcgcccg tccgcaggag
     7141 atagccaata ccattttgtt tcttgcctcc gatctggcca gccacattac cttgcaggat
     7201 atcgtggtgg acggcggttc aacattggga gcctgacgat gatctggaaa cggcatttaa
     7261 cgctggatga attgaatgct accagtcaga acacgctggt ggcgcatctg ggcattgttt
     7321 acacccgtct gggcgatgac gtgctggagg cggaaatgcc cgtcgatgcc cgcactcatc
     7381 aaccgtttgg tctgctacat ggcggcgcat cggcagcgct ggcggagacg ttaggatcaa
     7441 tggcgggtta tctgatgacc cgcgacgggc agtgcgtggt cgggaccgag ttaaacgcca
     7501 cccatcaccg cgccgtctcg caggggaaag tacgcggcgt ttgcctgccg ctgcatctgg
     7561 ggcggcagaa tcaaagctgg gaaattacgc tctttgacga gcaggggagg cgctgctgca
     7621 cttgtcgcct gggaacggcg gtaatgggat agttctggca aagtaaaatg caattgcagc
     7681 attaacgaag aaaggaagtg atctggttaa cactgtaatg taaaaaatgg gtaacaatcc
     7741 ggttttatca tgttgttgtg ttgttaatta cggtaaaggt gtcatagaaa caaaatgtaa
     7801 catctctctg gaacacccaa acggacaaca actatgaata aatcagggaa atacctcgtc
     7861 tggacagcgc tctcagtatt gggtgcgttt gccctaggct atattgcgtt aaatcgtggg
     7921 gaacagatca acgcgctatg gatcgtggtg gcgtcggtct gtgtctatct tattgcgtat
     7981 cgtttttatg ggctctatat cgccaaaaaa gtgctggcgg ttgacccaac gcgtatgacg
     8041 cccgcggtac gtcataatga tggtctggat tatgtcccga ccgataaaaa agtgctgttc
     8101 ggtcaccatt ttgcggccat tgctggcgca ggtccgct
//
LOCUS       DAGWFR010000174         8076 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.176, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000174 DAGWFR010000000
VERSION     DAGWFR010000174.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 8076)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8076)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8076
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.176"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..485)
                     /locus_tag="MOX77_003846"
     CDS             complement(<1..485)
                     /locus_tag="MOX77_003846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000706371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HCA3359253.1"
                     /translation="MKIVIAPDSFKESLSAMAVAEAIEKGFREIYPDADYVKVPMADG
                     GEGTVQSMVEASGGRYVDQWVQGPLGQPVTARWGMLGDSDTAVIEMAAASGLHHVSPE
                     LRNPLNTTSYGTGELIVAALERGVKRIILGIGGSATNDGGAGMMQALGVILRDKQGRS
                     LS"
     gene            complement(491..1759)
                     /locus_tag="MOX77_003847"
     CDS             complement(491..1759)
                     /locus_tag="MOX77_003847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004090684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntP family permease"
                     /protein_id="HCA3359254.1"
                     /translation="MTSISTLGAIAALVVAIVLILRKVSPAYGMMAGALVGGLIGGAD
                     LLQTVSLMVSGAQGIVNAVLRILAAGVLAGVLIESGAANTIAETIVRKVGETRALLAL
                     AIATLCLTAVGVFIDVAVITVAPIALSIARNAGLSKSAILLAMVGGGKAGNVMSPNPN
                     AIAASDAFHVPLTSIMLAGVVPGIVGLIIAYLLAKRLNNKGAGVADHEVTHHDDSVAR
                     PGFLVAISAPLVAIFLLSLRPFVGISIDPLIALPVGGLVGLLLMGRARHCNQYMVAGL
                     MRMAPVAIMLLGTGTLAGIIANSELKDVLIHGLTASGLPSWLLAPVSGAMMSMATAST
                     TAGTAVASGVFSPTLLELGVSALAGAAMIHAGATVLDHLPHGSFFHATGGSVNMQIHE
                     RLKLMPYETLVGLAITFISTLMFGFFGFAG"
     gene            complement(1827..3014)
                     /locus_tag="MOX77_003848"
                     /pseudo
     CDS             complement(1827..3014)
                     /locus_tag="MOX77_003848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001667973.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
     gene            complement(3291..4358)
                     /locus_tag="MOX77_003849"
     CDS             complement(3291..4358)
                     /locus_tag="MOX77_003849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HCA3359255.1"
                     /translation="MLEMLMQWYRRRFSDPEAIALLVILVAGFSILFFFSGLLAPLLV
                     AIVLAYLLEWPTARLQAIGCSRRWAASIVLILFVGILLLMAFVVMPIAWQQGIYLIRD
                     MPGMLNKLSDFAATLPRRYPALMDAGIIDAMAENMRTRMLNMGDSVVKYSLASLVGLL
                     TLAVYLVLVPLMVFFLVKDKEQMLNAVRRVLPRNRGLAGQVWNEMNQQITNYIRGKVL
                     EMVVVGVATWLGFLLFGLNYSLLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGLGT
                     EFWSCFAVYLIIQALDGNLLVPVLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPL
                     ATLIKAVVHAWPDGQVTDASS"
     gene            4566..6029
                     /gene="bepA"
                     /locus_tag="MOX77_003850"
     CDS             4566..6029
                     /gene="bepA"
                     /locus_tag="MOX77_003850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-barrel assembly-enhancing protease"
                     /protein_id="HCA3359256.1"
                     /translation="MFRQLKKNLVATLIAALALGQVAPAFADPADTLPDMGTSAGSTL
                     SIGQEMQMGDFYVRQLRGSAPLINDPLLVQYINALGMRLVSHADSVKTPFHFFLINND
                     EINAFAFFGGNVVLHSALFRYADNESQLASVMAHEISHVTQRHLARAMEDQKRSAPLT
                     WVGALGSILLAMASPQAGMAALTGTLAGTRQGMISFTQQNEQEADRIGIQVLQRAGFD
                     PQAMPSFLEKLLDQARYSTRPPEILLTHPLPESRLADARNRANQMRPVVVQSSADFYF
                     AKARALGMYNSGRNQLTSDLLDQWSKGNVRQQHAAQYGRALQAMEASKYDEARKTLQP
                     LLSAEPNNAWYLDLATDIDLGQKRANDAINRLKNARDLRVNPVLQLNLANAYLQGGQP
                     KAAETILNRYTFSHKDDGNGWDLLAQAEAALNNRDQELAARAESYALAGRLDQAISLL
                     SSASAQAKLGSQQQARYDARIDQLRQLQERFKPYTKM"
     gene            6069..6428
                     /gene="arsC"
                     /locus_tag="MOX77_003851"
     CDS             6069..6428
                     /gene="arsC"
                     /locus_tag="MOX77_003851"
                     /EC_number="1.20.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461430.1"
                     /note="This arsenate reductase requires both glutathione
                     and glutaredoxin to convert arsenate to arsenite, after
                     which the efflux transporter formed by ArsA and ArsB can
                     extrude the arsenite from the cell, providing resistance;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase (glutaredoxin)"
                     /protein_id="HCA3359257.1"
                     /translation="MTDTIKIYHNPRCSKSRDTLNLLKSNGVEPEVVLYLDTPADAAT
                     VRELLRMLGMSSARELMRQKEDLYKTLHLADSQLSEEALIQALVEHPKLMERPIVVAN
                     GQARIGRPPEQVLDILG"
     gene            complement(6455..7180)
                     /gene="hda"
                     /locus_tag="MOX77_003852"
     CDS             complement(6455..7180)
                     /gene="hda"
                     /locus_tag="MOX77_003852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA inactivator Hda"
                     /protein_id="HCA3359258.1"
                     /translation="MSSWVEVSLNTPAQLSLPLYLPDDETFASFWPGDNASLLAALQN
                     VLRQEHSGYIYLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGME
                     HLSLVCIDNIECVAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLAS
                     RLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQ
                     LDHASITAQRKLTIPFVKEILKL"
     gene            complement(7251..>8076)
                     /gene="uraA"
                     /locus_tag="MOX77_003853"
     CDS             complement(7251..>8076)
                     /gene="uraA"
                     /locus_tag="MOX77_003853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="uracil permease"
                     /protein_id="HCA3359259.1"
                     /translation="TKTIIISMVTLAVTVFGSVLFRGFLAIIPILIGVLAGYALSFAL
                     GVVDTTPIAQAHWFALPTFYTPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDL
                     VRDPGLHRSMFANGLSTIISGFFGSTPNTTYGENIGVMAITRVYSTWVIGGAAIFAIL
                     LSCVGKLAAAIQIIPLPVMGGVSLLLYGVIGASGIRVLIESKVDYNKAQNLILTSVIL
                     IIGVSGAKVHIGAAELKGMALATIVGIGLSLIFKLISLLRPEEVVLEANDAESPHQ"
BASE COUNT         2082 a         2343 c         2029 g         1622 t
ORIGIN      
        1 gaaagcgagc gcccctgttt atcgcgcaat ataacgccaa gcgcctgcat catccccgcg
       61 ccgccgtcat tcgtcgcact gccgccaatt cccagaataa tacgctttac gccacgctcc
      121 agcgccgcga cgattaactc gccggtgccg tagctggtag tattaagcgg gttacgcaat
      181 tcaggcgaaa cgtgatgcag cccggatgcc gccgccattt caatcacggc ggtatcgcta
      241 tcgcccagca ttccccaacg cgcggttacc ggttgcccaa gcgggccttg tacccactgg
      301 tcaacataac gcccgccgct agcttccacc attgattgca cggttccttc cccgccatcc
      361 gccatgggca ccttaacgta gtcggcgtca ggataaattt cgcggaaccc cttttctatc
      421 gcctcagcga ccgccattgc ggacaaactt tctttaaatg aatcaggagc aataacaatt
      481 ttcataggga ttatcctgca aaaccaaaga aaccgaacat cagagtagaa ataaaggtaa
      541 tggctaaccc caccagcgtt tcatacggca ttagctttaa acgttcatga atttgcatat
      601 tgacgctgcc gcccgtcgcg tggaaaaagc tgccatgcgg cagatggtcc agcaccgtgg
      661 cgcccgcatg gatcatagcg gctcccgcca gggcggaaac gccaagttca agtaacgtgg
      721 gagagaaaac gccggacgcc accgccgttc ccgctgtggt tgaggccgtc gccattgaca
      781 tcatggcgcc agacacgggc gccagcagcc aggacggcaa tcccgaagcg gtgaggccat
      841 gaatcaggac atctttaagt tcggaattag cgataatgcc ggccagcgta ccggttccca
      901 gcaacataat agcgacaggc gccatacgca tcagaccggc gaccatgtac tggttacagt
      961 ggcgcgcgcg tcccatcaac agcagaccga ccaatccccc tacgggcagg gcaattaacg
     1021 ggtcaatgga aatgccgaca aacggacgga gagaaagcag gaaaatagcg accagcggcg
     1081 cgctaatcgc caccagaaaa ccgggcctgg cgacagagtc atcatggtga gtcacttcat
     1141 gatcggcgac gcccgcgcct ttattattca gccgtttcgc taacagatag gcgataataa
     1201 gcccaacgat gcccggaacc acgcccgcca gcataataga ggtaagagga acatgaaacg
     1261 catcggaggc ggcaatagcg ttcgggttag gtgacatcac gttacccgct ttgccgccgc
     1321 cgaccatcgc cagcagaata gcgctttttg acaggcctgc attacgcgca atcgacagcg
     1381 caatcggcgc gacggtaatc accgccacat caataaatac gccgacggcg gtcaaacata
     1441 gtgtggcaat ggctaatgcc aataatgccc gggtttcccc cactttgcgg acaatcgtct
     1501 cagcaatcgt attcgccgcc ccggactcaa ttaatacgcc cgccagtacg cctgcggcca
     1561 gaatacgcaa tacggcatta acgatgccct gcgcgcctga caccatcagc gacacggttt
     1621 gcagaagatc ggcgccgcca atcaaaccgc cgaccagcgc gcccgccatc atgccgtagg
     1681 ctggcgacac ttttcttaaa attaatacga tggccacaac caatgcggca atggctccca
     1741 aggtggatat cgacgtcata tactgcgcct cctttaacat ggagcgcgca gtatggaaaa
     1801 aaccgcctaa aaatccgctg gagctttcaa caaatttcga ttcgaccagg cagcggtaac
     1861 ttgtcggacg atacagattc ggcctgaagc tccataccga tataaagcca aagcgtactt
     1921 tttaactcgt tgatttttat gtgcgtaata tcctcacagc gctgtaagcg atagcgcaat
     1981 gtattcacat gaatatgcaa tgctttggcc gtttgcgtca ggtcacaatt atgttcaaac
     2041 caagtccgca gcgtctgttg caatacgcct ttcgcgtcat gttgcaccag ttgcagccac
     2101 agacgcgata actcctgcac ttgccaactt tcagacagcc cgcttagcag cgcgggaagc
     2161 gcgtggtcat gataaaaaat gtactggctg cgcagctttt gtcttttcgc catcgcctgc
     2221 gtggctctcg ctgtgagcaa agatcggtgc aatcccgtct cgccggcaaa atagccccca
     2281 accaaaatac ggctaaagcc cgatgatgca gcccatgatt taaaaatctg caattcgccc
     2341 atttcctggc gggtattcca ctttccctct tttaacgtga taggcttaat aatgattaat
     2401 tcattaaatt cggtaaacgt caccaaatgg ttgcgcgcgt gattctcgaa ataatccatt
     2461 acattgcgca gcgcttcgcg atccggctgg gaaagttcaa taatcagcac cactctggga
     2521 accgccagat caatgcccag ataggccgcc atggagcgca acgactctgt tgaattttct
     2581 cgcaaaatca attggttgat cagctcttcg cgatagcgtt tatcccattg tcactgttcg
     2641 atcagcacca tatgctcgat caccagctcc gccgccattt taaccagctc ggcatacgcg
     2701 cgaacctcct ccggttcgcc ggtaatgccg accacgccga taagctgttc atgaaaagag
     2761 atgggaagat taatgccgga tcgcacgcct ttaagctgat tggcggtagc ggaatcaatt
     2821 tctacaatac ggttttcctt cagcgccaga atggcccctt cgtgacgctg gcgaagccgc
     2881 gaaggttcgc cagacgcgat aatgacgcca tgctcatcca tgacgtttac cgagtaagga
     2941 ataattttca tggctcgctg tacaatttgc cgcgcggtat accctttcaa gtaatgtttt
     3001 ctcaacacac tcattccctg tttcgttatc gcttcacatt aaaaaagcaa tctcgcatca
     3061 atgatgtcac ttattaacga atttctcaga agaatgctta ggctaagtca ccaaattttg
     3121 gcggctttac agcgagaatt ttgtaggttc cgacaataaa aatgccgcaa cacggtgcgg
     3181 cattaaaaaa aagagcggct ttctaagcgc ttgaccctca tcaggcgtgc gcaaaatggc
     3241 ggcagggcac tatgatgtcg ttcacgcttt acaacttttg tacagaccgc tcaggatgag
     3301 gcatccgtca cctgaccatc cggccaggca tggacaacgg ctttaatcag cgtcgccaat
     3361 ggaatggcga aaaatacccc ccagaatccc cacagaccgc cgaaaatcac cactgacaga
     3421 ataatcacca gcggatgcaa attcaccgct tcggagaaaa gtaccggtac cagcaaattg
     3481 ccatccagcg cctgaataat cagataaacg gcaaaacagc tccagaattc cgtccccaga
     3541 ccaaactgaa acagcgcgac gcccaccacc ggaattgtca ccacaaaggc gccgatatag
     3601 gggatcagga ccgaaaagcc caccagtacc gccaacagta gcgaatagtt gaggccaaac
     3661 aacaaaaagc ccagccaggt cgccacgccc accactacca tctccagcac ttttccgcgg
     3721 atatagttgg tgatctgctg attcatctca ttccacacct gccccgccag cccgcgatta
     3781 cgcggcagca cgcggcgcac ggcattcagc atctgctctt tatcttttac caggaaaaag
     3841 accatcagcg gcaccagcac cagatatacc gccagcgtca gtagcccgac taacgaagcc
     3901 agcgaatatt tcaccaccga atcgcccatg ttaagcatcc gggtacgcat gttttccgcc
     3961 atcgcatcaa taatgcccgc atccatcagc gccggatagc gtcgcggcaa ggtcgcggca
     4021 aaatcggaca gtttattcag cataccaggc atatcacgaa tcaggtaaat accctgctgc
     4081 caggcaatcg gcatcaccac aaacgccatt aataacagaa tgccgacaaa gaggataagg
     4141 acaatggagg ctgcccagcg ccgggaacag ccaatcgcct gcaggcgcgc cgtcggccac
     4201 tccagcaggt aggccagtac gatagcgacc agcagcggcg ctaacaggcc gctaaagaaa
     4261 aagaggatgc taaaaccagc caccagaatg accagcaagg caatcgcctc cggatcgctg
     4321 aagcgacggc gataccattg cattaacatt tcgagcataa aacccttccc agaactcaac
     4381 tgcgggattg tgatgccgaa ttgtatcgaa atgtcacaaa aaagacttcg ctttttatcg
     4441 ttgattcagg aaactaaaat agtgagtctg tgctcatcac agttacactt atgaagtgtc
     4501 ggagcgtgga acgatatttc acgacgttgg tcaaagggct atctcaaaac aacaggatag
     4561 aggttatgtt caggcagttg aaaaaaaacc tggtggcaac cctcattgca gcattggctc
     4621 tcggtcaggt cgcgcccgca tttgccgacc ctgccgacac gctgcccgat atgggaacct
     4681 cggcaggaag cacgctttct attggacaag agatgcaaat gggcgacttt tatgtgcgcc
     4741 agctacgcgg cagcgcgccg ttaatcaacg atccgctgct ggtgcaatac attaacgcgc
     4801 tggggatgcg tctggtctcg cacgcagact ccgtcaaaac gcccttccat tttttcttga
     4861 tcaataatga cgaaatcaac gcgttcgcgt tctttggcgg caatgtggtg ctgcactcgg
     4921 cgctttttcg ctacgcggat aacgaaagcc agctagcttc agtcatggcg catgaaattt
     4981 cccacgttac gcagcgccat ctggcgcgcg cgatggaaga tcaaaagcgc agcgcgccgc
     5041 ttacctgggt gggcgcgctg ggttccattt tgctggccat ggccagccca caggccggta
     5101 tggcggcgct aaccggtact ctggcgggaa cgcgccaggg aatgataagt ttcacccagc
     5161 aaaatgagca agaggccgac cgtattggta ttcaggtact gcaacgcgcc ggatttgacc
     5221 cacaggcgat gccctctttc ctcgaaaaac tgctcgacca ggcgcgttac tccacgcgac
     5281 cgcctgaaat tttgctcact caccccttac cggaaagccg ccttgcggat gcccgcaacc
     5341 gtgccaacca gatgcgcccg gtcgtggtgc aatcttccgc cgacttttat ttcgccaaag
     5401 cgcgcgccct gggaatgtac aattccggac gtaaccagct caccagcgac ctgctggatc
     5461 agtggtctaa aggcaacgtg cgtcagcaac atgcggcgca atatggccgg gcgttgcagg
     5521 cgatggaagc gagcaagtac gatgaagcgc gcaaaacgtt gcagccgcta ttaagcgcag
     5581 agccgaacaa tgcctggtat cttgacctcg ccaccgatat tgacctgggg cagaaaagag
     5641 ccaacgacgc gattaatcgc ctgaaaaatg cccgcgatct gcgcgttaat cctgtgctgc
     5701 agttaaacct cgccaatgcg tacctccagg gaggccagcc gaaagcggcg gaaaccattc
     5761 tgaatcgcta cacctttagc cataaagatg acggtaacgg ctgggatctg cttgctcagg
     5821 ccgaagccgc gctgaacaac cgcgatcagg agctggcggc acgcgctgaa agttatgcgc
     5881 tggcgggacg actggatcag gcaatttcac tgctcagcag cgccagcgcc caggcaaaac
     5941 tgggtagtca gcaacaggcg cgttacgatg cgcgtatcga ccagttgcgc cagttacagg
     6001 aacgcttcaa gccatacacg aaaatgtaat cgccgtttat tagccggatg gcgtcacaag
     6061 gagaactcat gaccgacacg attaaaatct accataaccc gcgctgctcg aagagccgcg
     6121 acacgctgaa cctgctgaaa tctaacggcg tggaaccgga agtggtgctt tatctggata
     6181 cgcccgccga tgccgccacc gtgcgggaac tgctgcgtat gttgggcatg tccagcgcgc
     6241 gcgaactgat gcgccagaaa gaagatctct ataagacgct tcacctggcg gatagccagc
     6301 taagtgaaga ggcgttaatc caggcgctgg ttgaacaccc taaactgatg gagcgcccca
     6361 ttgtagtggc aaatggtcag gcgcgtattg gccgaccgcc tgagcaggtg ctggacatcc
     6421 tcggttaacc gttaaacgcc gccgtcgcgg cgtattacag tttcaggatc tctttgacaa
     6481 acgggatcgt cagttttcgc tgggcagtga tcgacgcatg atcgagctga tccagcgtca
     6541 taaacagcgt gcgcatttcg cgatcaagac gtttgagtaa aaaccgtccg acatcttccg
     6601 gcagttcaaa cccccgtaat cgggcacgca actgtagcgc ctgaagtttg tcttcatcgg
     6661 aaagaggctg gagtttatag atttgccccc agtccagacg ggaagcgaga tcgggtaagc
     6721 ccagatttaa ctgtcttggc ggacgatcgc cggtgatcaa taaccgcgtc ttaccggact
     6781 ccagaatgcg gttatagaga tcaaagatgg ccatctccca cagttcatcg ccagcgacgc
     6841 actcaatgtt atcaatacac accagcgaga ggtgttccat accgtcgagc acttccggca
     6901 cgaaccaggt gcgtttatcg agcgggacgt agcctaccgc atctccacgc tgcgacagtt
     6961 cagcgcaggc ggcgtgcagc aaatggctgc ggcccgcgcc ttcacgcgcc caaaggtaga
     7021 tatatccact atgttcctgg cgcaacacgt tttgtaacgc ggccagtaga gaggcgttat
     7081 cccccggcca gaaacttgcg aaagtttcgt cgtcaggaag ataaagtggc aaagagagct
     7141 gtgccggtgt gttcagagat acctcaaccc aggatgacat aaaatcgcgc tgagtttacc
     7201 acataattcc cgtgagatag aaccgggcag catcgctgcc cggcaacccg ttactgatgc
     7261 ggagactccg catcatttgc ctccagtacc acttcttccg gacgcaacag gctaatcagt
     7321 ttaaaaatca ggctcaggcc aatcccgacg atggtcgcca gcgccatccc tttcaattct
     7381 gccgcgccga tatgcacttt cgcgccgcta acgccgatga tcaaaatcac cgaggtgagg
     7441 atcaggtttt gcgctttgtt gtagtcgact ttcgattcga tcaagacgcg aatccccgac
     7501 gcgccgatga cgccgtacaa cagcagcgag acgccgccca tcacgggtaa cgggataatc
     7561 tgaatcgccg ccgccagttt gccgacgcag gaaagcagaa tggcgaaaat cgccgcgccg
     7621 ccgataaccc aggtactgta aacgcgggtg atcgccatga cgccaatatt ttccccatag
     7681 gtggtattcg gcgtggagcc gaagaaaccg gaaatgatcg tcgacagtcc gttagcgaac
     7741 atcgagcggt gcaaaccggg atcgcgcact aaatcttttt tgacgatatt cgccgtcacc
     7801 accagatgac cgacatgctc ggcgatcacg accaacgccg cgggcagaat cgtcaggatc
     7861 gcaaaccatt caaaacgcgg cgtatagaag gtcggcagcg caaaccagtg cgcctgggca
     7921 atcggcgtgg tatcgaccac ccccagcgcg aatgacagcg catagcccgc cagcacgccg
     7981 atcaaaatcg gaatgatcgc caggaaaccg cgaaacagta cggagccgaa caccgtcacc
     8041 gccagcgtga ccatggagat aataattgtt ttcgtg
//
LOCUS       DAGWFR010000175         8052 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.177, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000175 DAGWFR010000000
VERSION     DAGWFR010000175.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 8052)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8052)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8052
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.177"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..232)
                     /locus_tag="MOX77_003854"
     CDS             complement(<1..232)
                     /locus_tag="MOX77_003854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aryl sulfotransferase"
                     /protein_id="HCA3359260.1"
                     /translation="MAHLTQDSTFTLGRRPAGLIYADKAKSFGGYTLFAPQTAEGRVY
                     LVDEQGEVAHQWQLPVRAGRDAVLLPNGNLGYN"
     gene            382..1389
                     /locus_tag="MOX77_003855"
     CDS             382..1389
                     /locus_tag="MOX77_003855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HCA3359261.1"
                     /translation="MAVQNKKRAKLIDVARHAGVSPGTVSNALHNTRFVEPQTRRRIE
                     EAIVALNYTPNIRARQLRTGKTNTIALLSSVPLAIASGASRLGFMMEVALTSAMMALE
                     KQHALILVPPGVNPLDAVSFDAAILIEPAENDPQLQALAQAGIPCVTIGRTPGTDTPV
                     PWVELHSAATAQLLLTHLEASGASKCALFVGNTRRTSVLESEAAYQRWCAGRQDPVVY
                     SLNESEGENAGYQAAQQLLQAHPDVDGVLVLIDTFASGAVRAFQEQDIAIPEQIRVVT
                     RYDGIRARESLPPLTAVNMHLDEVARQAITLLFAVLSGEKVSYSDGIMPELVVRASTC
                     R"
     gene            complement(1380..1498)
                     /locus_tag="MOX77_003856"
     ncRNA           complement(1380..1498)
                     /ncRNA_class="other"
                     /locus_tag="MOX77_003856"
                     /product="RtT sRNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00391"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="rtT sRNA, processed from tyrT transcript; Derived
                     by automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF00391"
     gene            complement(1534..1610)
                     /locus_tag="MOX77_003857"
     tRNA            complement(1534..1610)
                     /locus_tag="MOX77_003857"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1574..1576),aa:Pro,seq:cgg)
     gene            complement(1701..3332)
                     /gene="eptB"
                     /locus_tag="MOX77_003858"
     CDS             complement(1701..3332)
                     /gene="eptB"
                     /locus_tag="MOX77_003858"
                     /EC_number="2.7.8.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kdo(2)-lipid A phosphoethanolamine
                     7''-transferase"
                     /protein_id="HCA3359262.1"
                     /translation="MRYIKSMTQQKLSFLLALYIGLFMNCAVFYRRFGSYAQEFTIWK
                     GLSAVVELGATVLVTFFLLRLLSLFGRRVWRVLATLVVLFSAGASYYMTFLNVVIGYG
                     IIASVMTTDIDLSKEVVGLHFVLWLIAVSVLPLIFIWSNHCRYTLLRQLRTPGQRFRS
                     AAVVILAGVMVWAPIRLLDVQQKKFERATGIDLPSYGGVVANSYLPSNWLSALGLYAW
                     AQVDESSDNNSLINPARKFTYVAPKDGDDTYVVFIIGETTRWDHMGIFGYERNTTPKL
                     SLRCMFVREGGADNNPQRTLKEQNVFAVLKQLGFSSDLYAMQSEMWFYSNTMADNISY
                     REQIGAEPRNRGKTVDDMLLIDEMQNSLAQNPEGKHLIILHTKGSHFNYTQRYPRSYA
                     QWKPECIGVDSGCTKAQMINSYDNSVTYVDHFITSVFDQLRDKKAIVFYAADHGESIN
                     EREHLHGTPRNMAPPEQFRVPMLVWMSDKYLASPQHAQMSAHLKQQAEIKVPRRHVEL
                     YDTIMGCLGYTSPNGGINQNNNWCHIPDAQKVAAK"
     gene            complement(3563..4267)
                     /locus_tag="MOX77_003859"
     CDS             complement(3563..4267)
                     /locus_tag="MOX77_003859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HCA3359263.1"
                     /translation="MIVRKRRGRRTLRCLAGLMACSFFINTTYAWQQEYIAEAAPGHM
                     TERYTWDSDHQPNYNDILAERIQSTQNTVGPVLSLADETPLDATSGISMGWNFSLSRR
                     VTTGPVAALHYDGSTSSMYNEYGDSATTLALTDPLWHASVSTLGWRVNSQFGDVRPWA
                     QISYNQQFGENIWKAQSGLSRMTAGNQAGNWLDVTVGADVLLNPHLAAYAAFSQAENS
                     ATDSDYLYTLGVSARF"
     gene            4424..5005
                     /gene="tag"
                     /locus_tag="MOX77_003860"
     CDS             4424..5005
                     /gene="tag"
                     /locus_tag="MOX77_003860"
                     /EC_number="3.2.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HCA3359264.1"
                     /translation="MQRCDWVSQDPLYIAYHDNEWGVPETDSRKLFEMICLEGQQAGL
                     SWITVLKKRENYRACFHQFDPIRIAAMQEEDVERLLQNTGIIRHRGKIQAIISNARAW
                     LAMEQNGESFADFVWSFVDGQPQITQAASLDKIPTSTPASDALAKALKKRGFKFVGTT
                     ICYSFMQACGLVNDHITGCFCHPGEKHDSQIPE"
     gene            4983..5423
                     /locus_tag="MOX77_003861"
     CDS             4983..5423
                     /locus_tag="MOX77_003861"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HCA3359265.1"
                     /translation="MIRKSQSEDMASILALWMKSTIYAHPFIEERYWHESEAIVRDVY
                     LPAAQTWVWEENGQLKGFVSVLEARFVGALFVAPDALRHGIGKALLEYVQQRFPLLSL
                     EVYQKNQSAVNFYHALGFRIEDSAWQEDTSHPTWIMSWQADQTP"
     gene            complement(5392..7725)
                     /locus_tag="MOX77_003862"
     CDS             complement(5392..7725)
                     /locus_tag="MOX77_003862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin guanine dinucleotide-containing
                     S/N-oxide reductase"
                     /protein_id="HCA3359266.1"
                     /translation="MTHAPSRHSVLTAAHWGPVRVETDGERIFASYGELPTAHQNSLQ
                     TVVHDQVHSKTRVRFPMVRKGFLASPDKPQGIRGQDEFVRVSWDDALDLIHAQHKRIR
                     ESYGPSSIFAGSYGWRSNGVLHKAATLLQRYMALAGGYTGHLGDYSTGAAQAIMPYVV
                     GGNEVYQQQTSWPVVLEHSEVVVLWSANPLNTLKIAWNASDEQGLDYFAALRQSGKRL
                     ICIDPMRSESVDFFGDKMEWIAPHMGTDVALMLGIAHTLVENGWQDEAFLARCTTGYD
                     RFADYLLGTTDGTAKTAEWAAEICGVSAVKIRELAEIFHHNTTMLMAGWGMQRQQFGE
                     QKHWMIVTLAAMLGQIGTPGGGFGFSYHFANGGNPTRRAAVLASIQGSIPGGVDAVDK
                     IPVARIVEALENPGGFYQHNGMDRRFPDIRFIWWAGGANFTHHQDTNRLIRAWQKPEL
                     VVISECFWTAAAKHADIVLPATTSYERNDLTMTGDYSNQHLAPMKQVVSPRWEARNDF
                     DVFAELSERWEAGGYARFTEGKSELAWLETFYNIAAQRGASQGVTLPPFAAFWQANRL
                     LEMPENPANAQFVRFADFRRDPDNHPLKTASGKIEIYSARIASYGYADCPGHPMWLAP
                     DEWHGNADAGQVQLLSAHPAHRLHSQLNYSSLRERYAVAGREPVTIHPQDATTRGIVD
                     GDTVRVWNHRGQVLAGAVVTDGIRPGVICIHEGAWPDPEPTAGGICKNGAVNVLTKDL
                     PSSRLGNGCAGNTALVWFEKYTGPALPLTAFDPPANS"
     gene            7878..>8052
                     /locus_tag="MOX77_003863"
     CDS             7878..>8052
                     /locus_tag="MOX77_003863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family lipoprotein"
                     /protein_id="HCA3359267.1"
                     /translation="MKKRVFVIAAIVSGALAVSGCTTNPYTGEREAGKSGIGAGIGSL
                     VGAGIGALSSSKKD"
BASE COUNT         1904 a         2280 c         2097 g         1771 t
ORIGIN      
        1 cgttataacc cagattaccg ttcggcagca gcaccgcatc acgcccggcg cgaaccggaa
       61 gctgccactg atgcgcgact tcgccctgct cgtccaccag gtaaacccgc ccttcggcgg
      121 tttgcggcgc aaaaagcgta tagccgccaa agctcttcgc cttatcagcg tagataaggc
      181 ccgccggacg gcgtccaagg gtgaaagtcg aatcctgagt taagtgtgcc acatcgcctc
      241 ctgaggaata gatttgcgcc aaaatactcc attaaaacgt tttaatgaag agttttttac
      301 gatcaccacc gaaaaaaagc aaacgttacc gtctggtaaa tatgctaccc tgtgcgcaaa
      361 ttttcgcagg tcaggaagca gatggctgtt caaaataaaa aacgcgcaaa gttgattgat
      421 gttgcccgcc atgcaggcgt ctcgccaggg acggtatcca atgcattgca caacacccgc
      481 tttgtcgagc cgcagacgcg acggcgtatt gaagaggcca ttgttgcgct caactacacg
      541 ccgaatattc gcgctcgcca gttacgaacc ggcaaaacca ataccattgc tttgctctct
      601 tcggtgccgc tggcgattgc ctccggcgca tcacgactgg gatttatgat ggaggtggcg
      661 ttaacgtccg cgatgatggc gctggaaaaa cagcatgcgc tgattctggt gccaccaggg
      721 gtaaatccac tggatgccgt cagctttgac gcggcgatcc tgattgagcc ggcggagaac
      781 gacccgcagc tccaggcgct ggcgcaagcg ggcattccct gcgtcaccat tggccgcacg
      841 ccggggaccg acacgcctgt gccgtgggtt gagctgcact cggcggcaac agcacagctt
      901 ctgctaacgc atctggaggc ctccggtgcc agcaaatgtg cgttatttgt cggtaacaca
      961 cggcgaacat cagttctaga gagcgaagcg gcttaccagc gctggtgcgc ggggcgccag
     1021 gaccccgtcg tctactctct caatgaaagc gagggtgaaa atgccggcta ccaggccgcg
     1081 cagcagctat tacaggcgca tcccgacgtt gacggcgtgc tggtgctgat agataccttt
     1141 gccagcggcg cggtacgggc tttccaggaa caagacatcg ccatacctga acaaatacgg
     1201 gtggttactc gctatgacgg tatccgcgcg cgcgaatcgc tgccgccgct gacggcagtg
     1261 aatatgcatc ttgatgaggt ggcgcgacag gcaatcacac tcctgtttgc cgttctgtcg
     1321 ggtgagaagg tcagctacag cgacgggatc atgcctgaac tggtggtgcg agcgtcaacc
     1381 tgccggtgac agaggatgac ttgccactgc gggccgttgc tgacgcaacg ttctctcgct
     1441 tcgctcgagt cgaacctctt gcccccggag gttctcatcc tcgtcaggct tcagatacaa
     1501 aaaaccctgc tcgctgagca gggtttctga atttggtcgg tgatagagga ttcgaacctc
     1561 cgaccccttc gtcccgaacg aagtgcgcta ccaggctgcg ccaatcaccg aatgcgggcg
     1621 catcttactg ctcaggcgca cgcccgtcaa tcccttagtc gcaaaataca attcaatcgg
     1681 cgagaaagtc ggcagacaac ctacttcgcg gcgactttct gcgcatcggg aatatggcac
     1741 cagttgttgt tctggttaat gccgccattc ggcgatgtat accccaggca gcccattatc
     1801 gtatcgtaca gttccacatg acgacgcggc actttgatct ccgcctgctg tttcaggtga
     1861 gcggacatct gcgcatgttg cggactggca agatatttat ccgacatcca taccagcatc
     1921 ggaacacgga attgctccgg cggcgccata ttgcgcggcg taccgtgcaa atgttcgcgt
     1981 tcgttaatcg actcgccgtg gtcagccgcg tagaacacaa tcgctttttt atcacgtagc
     2041 tgatcgaaca cactggtaat aaagtgatca acataggtca cggagttatc gtaagagttg
     2101 atcatctgcg ctttcgtgca gccgctatcg accccaatac attcgggctt ccattgagcg
     2161 tagctgcgcg gataacgctg cgtatagtta aaatgcgatc ccttggtatg caggataatc
     2221 agatgcttac cctccggatt ctgggcaagc gagttctgca tctcatcaat caacagcatg
     2281 tcatccaccg ttttaccgcg gttacgcggc tcggcgccaa tctgctcgcg gtaagagata
     2341 ttatccgcca tggtattgct atagaaccac atctcgctct gcatggcgta cagatcggaa
     2401 ctgaatccga gctgtttgag tacggcaaaa acattctgct cttttaacgt acgctgcggg
     2461 ttattatccg ccccaccttc ccgtacaaac atacagcgta aagaaagctt cggcgtggta
     2521 ttacgctcgt agccgaaaat ccccatgtga tcccaacggg tcgtctcacc gataatgaaa
     2581 acgacgtagg tgtcatcccc atctttcggc gcaacatagg taaatttcct ggccgggttt
     2641 attaacgaat tattgtccga cgactcatct acctgcgccc aggcatacag ccctaacgca
     2701 gataaccagt ttgagggcag gtaggagttc gccaccacgc cgccatagct gggtaagtcg
     2761 atgcctgtcg cccgttcaaa ctttttctgc tgtacatcca gcaggcggat aggcgcccac
     2821 accattacgc ctgcgagtat cactacagcg gcgctgcgaa aacgctgccc cggcgtacgt
     2881 agctggcgca acaacgtgta gcgacagtgg ttactccaga taaagatgag cggaagcacg
     2941 ctcacggcaa tcagccacaa tacaaagtgc agccccacca cctctttcga gagatcgata
     3001 tcggtggtca taacagacgc aataatgccg tagccaatca ccacgttcag gaaggtcatg
     3061 taataactgg cgccagcgga aaacagcacc accagcgtgg ccagcacgcg ccagacgcgt
     3121 cggccaaaca gtgaaagaag acgaagtaag aagaaagtga ccagcaccgt ggcgccaagt
     3181 tcgacaactg cggaaaggcc tttccaaatg gtaaattctt gcgcataact gccgaaacgg
     3241 cggtaaaaca cggcgcaatt cataaacaga ccgatataga gcgcaagcaa gaaactaagt
     3301 ttctgctgcg tcatcgattt aatgtatctc atgcaaacaa accctgggaa tcgggataaa
     3361 aacgacctgt acaacgattc tttaatcaaa caggtaaata tgcggctaac gcagatgtga
     3421 gaaagtctac cagcgcggct aagtagacca caggaagcgc aaaaagtgtc tatagagaat
     3481 gtgattgacc tatatatttt tgtaaatata tagatagggt attagctgaa cttctaataa
     3541 gtccaggcga cggtttatcc cgttaaaacc tggcgctcac ccccagggta tacaaataat
     3601 cgctatccgt agcgctgttt tccgcctgag aaaacgccgc atacgccgcc aggtgcgggt
     3661 taagtaacac gtccgcgcct acggtgacat ccagccagtt tcccgcctga tttcctgcgg
     3721 tcatacgact caacccggac tgcgctttcc agatattttc cccaaactgt tggttatagc
     3781 tgatctgcgc ccagggacgg acatcgccga actgcgagtt tacccgccag cctaacgtac
     3841 tgacgctggc atgccataac ggatcggtaa gcgctaatgt cgtcgcgcta tcgccatatt
     3901 cgttatacat tgatgacgtc gaaccgtcgt aatgcagcgc cgcgaccggc ccagtggtta
     3961 cgcgtcggga aagcgaaaaa ttccagccca tactgatacc gctggtcgca tcaagcgggg
     4021 tttcatccgc caggctaagc accggaccca ccgtattttg cgtagactga atacgttcgg
     4081 ccagtatgtc gttgtaattc ggttggtgat cgctgtccca ggtatagcgt tccgtcatat
     4141 gccccggagc cgcttcagcg atatattctt gttgccaggc atacgtggta ttgataaaaa
     4201 acgagcaggc cataaggccc gccagacaac gcaatgtccg gcgaccacgg cgttttctta
     4261 caatcatcaa cgcgactcca gagtagagcc gaattcggcg atattattgt cattgaatga
     4321 aggatgtcgg acatcagccc tgtattaact attgtccttt tagcggaccc gtcaaggcgg
     4381 gttgaaggaa attttcgcgg taaccacaat aacgaggaag tctatgcagc gttgcgactg
     4441 ggtcagccag gacccccttt atattgccta tcatgataac gagtggggcg taccggaaac
     4501 tgacagcaga aagctgtttg aaatgatctg tcttgaaggt caacaggccg gtttatcctg
     4561 gatcaccgtg cttaaaaaga gggagaacta ccgcgcctgt tttcatcagt ttgacccgat
     4621 acgcatcgca gctatgcagg aggaggatgt tgaacgcctg ctacagaaca cgggcatcat
     4681 acgacatcgc ggtaaaattc aggccattat cagtaacgcc cgcgcctggc ttgcgatgga
     4741 gcaaaacggc gagtctttcg ccgattttgt ctggtcattc gttgatggtc agccgcagat
     4801 cacccaggcg gccagcctgg ataagatccc cacctcaaca cctgcgtccg atgcgcttgc
     4861 taaggcattg aaaaaacgcg gtttcaagtt tgtcggtacg actatctgtt actcctttat
     4921 gcaggcgtgc ggactggtca acgaccatat taccggctgt ttttgccatc cgggagaaaa
     4981 acatgattcg caaatcccag agtgaagaca tggcgtctat tctggcgctg tggatgaaaa
     5041 gtaccattta tgcccatccc tttatcgaag aacgttactg gcacgagagc gaagcaattg
     5101 tacgcgacgt ctatttaccc gccgcgcaaa cctgggtatg ggaggaaaat gggcaactga
     5161 aaggcttcgt cagcgtactg gaagcccgtt ttgtcggggc gctgtttgtc gcccccgacg
     5221 cgttaagaca cggcattggc aaagcgcttc tggaatatgt ccagcaacgt tttcctctgc
     5281 tgagccttga ggtttaccag aaaaatcaat ccgccgtaaa cttctaccat gcgctcggtt
     5341 ttcgtattga agatagcgcc tggcaggagg atacctccca ccccacctgg attatgagtt
     5401 ggcaggcgga tcaaacgccg taagcggtag cgccgggccg gtatatttct caaaccagac
     5461 cagcgcggtg ttgcccgcac aaccgttccc cagccgggaa ctgggaagat cttttgtcag
     5521 gacgtttacc gcgccgtttt tgcatatgcc gcctgcggta ggttcagggt ccggccatgc
     5581 gccttcgtga atacagataa cgccaggccg aattccgtcg gtaacgaccg cgcccgccag
     5641 aacctgcccg cgatgattcc agacgcgtac cgtatcgcca tcgacgattc cgcgtgttgt
     5701 cgcatcctgc ggatgaatcg ttaccggttc gcgtccggct accgcatacc gctcccgtaa
     5761 cgaactgtag ttgagctggc tatgcagacg gtgcgccgga tgcgcggaaa gtagctgaac
     5821 ctgccccgca tcggcgttcc cgtgccactc atccggcgcc agccacatcg gatgaccggg
     5881 acaatccgca taaccatagc tggcaatgcg cgcagaatag atttcgattt tgccgctggc
     5941 cgtttttagc ggatggttat caggatcgcg gcgaaaatcc gcgaagcgca caaactgcgc
     6001 gttggcggga ttttccggca tctccagtaa acggttagcc tgccagaatg cggcaaacgg
     6061 cggcagcgtc accccctggc tggcgccacg ctgggcggca atattgtaga aggtctccag
     6121 ccacgccagc tcgctttttc cttcggtgaa ccgagcataa ccgccggctt cccaccgttc
     6181 gctcagttca gcaaaaacgt caaaatcatt ccgcgcctcc caccggggcg acacgacctg
     6241 cttcatcggc gccaaatgct gattgctata gtcgccggtc atggttaaat cgttacgctc
     6301 atagctggtg gtcgcgggca gaacgatatc cgcgtgtttc gcggcggccg tccagaaaca
     6361 ttccgagata acgaccagtt ccggtttttg ccacgcacga atcagacggt tggtatcctg
     6421 atgatgggta aagttcgcgc cacccgccca ccagataaaa cgaatatccg ggaagcggcg
     6481 atccatccca ttgtgttggt aaaacccacc ggggttttcc agcgcctcga caatacgcgc
     6541 caccggtatt ttatctaccg catcgacccc gccagggatg ctcccctgta tcgacgctaa
     6601 cacggcggcg cggcgcgtcg ggtttccgcc gttagcaaaa tgataagaaa aaccaaaccc
     6661 gccgccaggc gtaccaattt gccccagcat tgcggccagc gtaacgatca tccagtgctt
     6721 ttgctcgccg aactgctgac gctgcattcc ccaaccagcc atcaacatgg tggtgttatg
     6781 atgaaatatt tccgccagtt cgcggatttt caccgcagaa acgccgcaaa tttccgccgc
     6841 ccattccgct gttttggccg taccgtcggt cgtgcccaaa agatagtcag cgaagcggtc
     6901 atagcccgtc gtgcagcggg caaggaacgc ttcatcctgc caaccgtttt ccaccagcgt
     6961 atgagcgatc cccagcatta acgccacatc ggtgcccata tgtggggcga tccactccat
     7021 cttatcgcca aaaaagtcga cgctttccga tcgcatcgga tcgatgcaga tcaggcgttt
     7081 gccgctttgt cgcagcgccg caaaatagtc gagcccctgt tcatccgagg cgttccaggc
     7141 aattttcaga gtattcagcg ggttcgcgct ccagagcacc accacctcgc tatgttccag
     7201 caccaccggc cagctagtct gctgctggta aacctcgtta ccacccacca cataaggcat
     7261 gatagcctgc gccgcgccgg tggaataatc gccaagatgg ccggtatacc ctcccgccag
     7321 cgccatgtaa cgctgcaata gcgtagccgc tttatgcaat acgccgttcg aacgccaacc
     7381 gtaggagccg gcgaagatgg acgatggtcc ataactttca cgaatacgtt tgtgctgagc
     7441 gtggatcaga tccagcgcgt catcccaact tacgcgaaca aactcatcct gcccgcgtat
     7501 gccttgcggc ttatcgggag aagccaggaa ccctttacgc accatcggga agcgaacccg
     7561 cgttttgctg tgtacctggt catgcacaac ggtttgcagg gagttctggt gtgccgtcgg
     7621 gagttcgcca tatgaagcaa aaatgcgttc tccgtcggtt tcaacacgga ctggccccca
     7681 gtgtgcggcg gtcaataccg aatgacgcga tggtgcgtgg gtcaaggttc gctcctgaat
     7741 tattgggatt atttattttg ccgatcaatg ttacttacaa atttcagagt tttccctgga
     7801 attttcttca tgtgcagacg tcataatcaa ccgccacggt cgctgtggta aaaataaaaa
     7861 agtgataagg atttaagatg aaaaaacgtg tatttgtgat tgctgccatc gtgagcggcg
     7921 ccctggcagt atctggctgc acaacaaacc cttacaccgg cgaacgcgaa gcaggtaaat
     7981 ccggcattgg cgcgggtatt ggatcgctgg tcggcgcagg catcggcgcg ctctcctcct
     8041 ccaaaaaaga tc
//
LOCUS       DAGWFR010000176         7856 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.178, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000176 DAGWFR010000000
VERSION     DAGWFR010000176.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 7856)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7856)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7856
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.178"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            100..1476
                     /gene="hpaX"
                     /locus_tag="MOX77_003864"
     CDS             100..1476
                     /gene="hpaX"
                     /locus_tag="MOX77_003864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate permease"
                     /protein_id="HCA3359268.1"
                     /translation="MSDTSSALPESPESVGSHNALSTGQQTVINKLFRRLIVFLFVLF
                     IFSFLDRINIGFAGLTMGQDLGLSATMFGLATTLFYATYVIFGIPSNVMLSIVGARRW
                     IATIMVLWGIASTATMFAVGPKSLYVLRMLVGITEAGFLPGILLYLTYWFPAFFRARA
                     NALFMIAMPATTALGSIVSGYILSLDGIFNLHGWQWLFLLEGFPSVLLGIMVWFYLDD
                     TPAKAKWLTAEDKKCLQEMMDNDRLTLVQPEGAISHNAMQQRSLWREVFTPIVLMYTL
                     AYFCLTNTLSAISIWTPQILKSFNEGSSNITIGLLAAIPQICTVLGMIYWSRHSDKHQ
                     ERKHHTALPFLFAAAGWLLASATDRNLIQLLGIVMASTGSFSAMAIFWTTPDQSISLR
                     ARAIGIAVINATGNIGSALSPVMIGWLKDITGSFNSGLWFVASLLVVGAAIIWLIPMK
                     ASRPRATP"
     gene            1486..2382
                     /gene="hpaA"
                     /locus_tag="MOX77_003865"
     CDS             1486..2382
                     /gene="hpaA"
                     /locus_tag="MOX77_003865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate catabolism regulatory
                     protein HpaA"
                     /protein_id="HCA3359269.1"
                     /translation="MCQRAIANIDISKEYDESMGSNDVHYQSFARMADFFGRDMQAHR
                     HDQFFQMHFLDTGQIELQLDDHRYSVQAPLFVLTPPSVPHAFITESDSDGHVLTVREE
                     LVWPLLEVLYPGTREAFGLPGICLSLADKLNELAALKHYWQLIERESTEQLAGCEHTL
                     VLLAQAVFTLLLRNAKLDDHAATGMRGELKLFQRFTLLIDNHFHQHWTVPDYACELHI
                     TESRLTDICRRFANRPPKRLIFDRQLREAKRLLLFSDNAVNEIAWQLGFKDPAYFARF
                     FNRLAGCSPSQFRQREVPSFLN"
     gene            2396..3334
                     /locus_tag="MOX77_003866"
     CDS             2396..3334
                     /locus_tag="MOX77_003866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HCA3359270.1"
                     /translation="MMKKSVAMLAVCMLAQSHLAIAAGAPAPQEINIVLLGTKGGPSL
                     LNTARLPQATALTIGDKIWLIDAGYGASLQLVKNGIPLRNINTILLTHLHSDHILDYP
                     SLLMNAWASGLKDHTIQVYGPPGTQAMTKASWKVFDRDITLRMEEEGKPDPRNLVKAT
                     DIGQGVIYKDELVTISALKVPHSPFPDGEAFAYRFDTQGKRIVFSGDTSWFPPLATFA
                     QGADILVHEAVHVPSVAKLANSIGNGKTLAEAIASHHTTIEDVGKIAREAHVKKLVLS
                     HLVPATVADDVWQQEAMKNYPGPVIVGHDNMTISVP"
     gene            complement(3742..4104)
                     /gene="iraM"
                     /locus_tag="MOX77_003867"
     CDS             complement(3742..4104)
                     /gene="iraM"
                     /locus_tag="MOX77_003867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-adapter protein IraM"
                     /protein_id="HCA3359271.1"
                     /translation="MEWKVVDTVISPSTGVSFSCIHSLKNLRLTLWYQADVYMPPGSI
                     IIPFNKGVLINDKLYPVTVYNVTRFNPVLWKSLKENSHCPGNCNPKPEACSYPFECLV
                     SVCPFGLTRNIQIDNKKV"
     gene            complement(4758..5063)
                     /gene="cbpM"
                     /locus_tag="MOX77_003868"
     CDS             complement(4758..5063)
                     /gene="cbpM"
                     /locus_tag="MOX77_003868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperone modulator CbpM"
                     /protein_id="HCA3359272.1"
                     /translation="MANITVTFTITEFCLHTGVTEEELNEIVGLGVIEPYEDDNADWQ
                     FDDRAASVVQRALRLREELALDWPGIAVALTLLEENSRLREENRLLLQRLSRFISHP"
     gene            complement(5063..5983)
                     /gene="cbpA"
                     /locus_tag="MOX77_003869"
     CDS             complement(5063..5983)
                     /gene="cbpA"
                     /locus_tag="MOX77_003869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="curved DNA-binding protein"
                     /protein_id="HCA3359273.1"
                     /translation="MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEA
                     RFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQFNRQFQQHEGQPYNAEDFDDIFSSIF
                     GQHGRHSHHRHAARGHDIEIEVAVFLEETLEEHQRTISYSVPVYNAFGLVEREIPKTL
                     NVKIPAGVSNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVNQDLEVVLPLA
                     PWEAALGAKVSVPTLKERILLTIPPGSQAGQRLRIKGKGLASKKHTGDLYAIIKIVMP
                     PKPDEKTAALWQQLADAQSSFDPRQQWGKA"
     gene            6219..6581
                     /locus_tag="MOX77_003870"
     CDS             6219..6581
                     /locus_tag="MOX77_003870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper resistance protein"
                     /protein_id="HCA3359274.1"
                     /translation="MAKQQRMGWWFLCLACVVVMVCTAQRMAGLHALQMQATASAAVV
                     SAPSSTDDGSPVTPCELSAKSLLAAPPVLFEGAILALYLLLSLLAPVRVMRLPFSPPR
                     AISPPTLRVHLRFCVFRE"
     gene            6630..>7856
                     /locus_tag="MOX77_003871"
     CDS             6630..>7856
                     /locus_tag="MOX77_003871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase"
                     /protein_id="HCA3359275.1"
                     /translation="MMILFRRILFCLLWLWLPVSWAAESGWLRSPDNDHASIRLRADT
                     SANSETRLLLDVKLENGWKTYWRAPGEGGVAPSIAWKGDMPEVSWFWPTPSRFDVANI
                     TTQGYHDEVTFPMIVRGTPPATLRGVLTLSTCSNVCLLTDYPFSVTPTVQNADFAHDY
                     ARAMGKVPLRSGLTDSLDVGYRPGELVVTATRAAGWSSPGLYLDTIDDVDFAKPRLRV
                     EGDRLQATVPVTDSWGEKAPDLRDKSLTLVLADGAIAQESTQTIGAAPAQTPDNAALP
                     FWQVVMMALIGGLILNLMPCVLPVLGMKLGSILLVEEKSRSHIRRQFLASVAGIIASF
                     MALAAFMTLLRLSNHALAWGVQFQNAWFIGFMALVMLLFSASLFGLFEFRLPSSMTTK
                     LATYGGNGMSGHFWQGA"
BASE COUNT         1807 a         1947 c         2038 g         2064 t
ORIGIN      
        1 actgtccggt gcgtccggcg tctattaagc ctgggccggt aagcgcagcg ctaccgggca
       61 accgtagtac cctacaaaat tcccatcaga ggaaaaaaaa tgagcgacac atcatctgca
      121 cttccggaaa gccccgagtc tgtcggttcg cacaacgcgc tcagcacggg tcaacaaacc
      181 gtcataaata aactgttccg ccgactgatc gtatttttat tcgtgttgtt tatcttctcg
      241 tttttagacc gtatcaacat cggttttgcc gggttgacga tggggcagga tctggggtta
      301 agcgccacca tgtttggtct tgccacgacg ctgttttacg ccacctacgt cattttcggc
      361 attcccagca acgtgatgtt gagcatcgtc ggcgcccgcc gctggattgc gaccattatg
      421 gtgctatggg gcattgcatc taccgccacg atgttcgcgg tgggaccgaa aagcctgtat
      481 gtgctgcgaa tgctggtggg cattaccgaa gcgggctttt tgccaggaat attgctctat
      541 ttaacctact ggttcccggc atttttccgc gcccgcgcca acgcattatt tatgattgcc
      601 atgccggcca ctaccgcgtt ggggtcaatt gtctccggct atattttatc gctggacggc
      661 atattcaatc tgcatggatg gcagtggtta ttcctgttgg aaggatttcc gtcagttttg
      721 ttaggcatta tggtctggtt ttacctggat gataccccgg caaaagccaa atggctgacg
      781 gcagaggata aaaaatgttt gcaggagatg atggataatg atcgcctgac gctggttcag
      841 cctgaggggg ccatcagcca taacgccatg cagcagcgta gcctgtggcg cgaagtattc
      901 acgccaattg tactgatgta tacgctggcc tatttttgcc ttaccaatac gcttagcgcc
      961 attagtatct ggacgccgca aatcctgaaa agttttaatg aaggcagcag caatatcacc
     1021 atcggcctgc tggcggcgat cccgcagatt tgtactgttc tgggcatgat ttactggagc
     1081 cgccattcgg acaaacatca ggagcgtaaa caccacactg cgttaccgtt cctgtttgcc
     1141 gccgcgggct ggctgctggc gtcggcgacc gaccgtaacc tgatccagct cctggggatc
     1201 gtgatggcat ccacgggttc ctttagcgcg atggcgatct tctggaccac gccggatcag
     1261 tcgatcagtt tacgcgccag ggcgataggc attgcggtca tcaatgccac cggcaatatt
     1321 ggctccgcgc tcagcccggt tatgattggc tggctaaaag atatcactgg tagcttcaat
     1381 agcggactct ggtttgtcgc ttctctgtta gtcgtcggcg ccgccattat ctggctcatt
     1441 cccatgaaag catcgcgtcc gcgcgccacc ccttgaggag aaactatgtg ccaacgtgcg
     1501 atcgccaata ttgatatcag caaagagtat gacgaaagca tgggcagtaa cgatgtgcat
     1561 tatcagtcgt ttgctcgtat ggcggatttc tttggtcgtg atatgcaggc gcatcgccac
     1621 gaccagtttt ttcaaatgca ctttcttgat accgggcaga ttgagctaca gctcgacgat
     1681 catcgctatt cggtgcaggc gccgctattt gtgctaacgc cgccctcggt gccgcatgct
     1741 tttattaccg aatcggatag cgatggtcat gttctgacgg tacgcgaaga gctggtttgg
     1801 ccgctgctgg aagtgcttta tcccggcacc agagaggcct tcggcctgcc gggaatctgc
     1861 ctgtcgctgg cggataaact caacgagctg gcggcgctca aacattactg gcagctaatt
     1921 gagcgggagt ccacggaaca actggctggc tgcgaacata ccttggtact actggcgcag
     1981 gcggtattta ccttgctgtt gcgtaatgcg aagctggacg atcatgccgc aaccgggatg
     2041 cgcggtgaac tgaaactttt tcagcgcttt accctgttaa ttgacaacca cttccatcag
     2101 cactggacgg tgcccgatta tgcctgtgag ttgcatatta ccgaatctcg tttgaccgat
     2161 atttgccgac gttttgctaa tcgcccgcct aaacgcctga tttttgatcg gcaattacgc
     2221 gaggcgaaac gactgctgct tttttccgac aatgctgtca acgagatcgc ctggcaatta
     2281 ggttttaaag atccggctta tttcgcccgt ttctttaatc gccttgctgg ctgttctcct
     2341 tcgcagtttc gccaacgtga agttccttct tttctcaact aagaagagta aaaacatgat
     2401 gaaaaaaagc gtcgctatgc tggcggtttg tatgctggcg caaagccacc ttgccattgc
     2461 tgccggtgct cctgcgcctc aagagatcaa cattgtttta ctgggcacca aaggcgggcc
     2521 ttctttgctc aatacagcca gactaccgca agcgacggcg ctcactatcg gcgataagat
     2581 atggctgata gatgccggct acggcgccag tctgcaactg gtgaaaaatg gcattccact
     2641 gcgcaacatc aatactattt tgctcaccca tctgcacagc gaccacatac tggattatcc
     2701 ttccttgctg atgaatgcct gggcaagtgg cctgaaagac cataccatac aggtttatgg
     2761 cccgccggga acccaggcga tgacgaaggc tagctggaag gtctttgaca gggatatcac
     2821 gttacgcatg gaagaagagg ggaaacccga tccgcgcaac ctggttaagg cgaccgatat
     2881 cggccagggc gtcatctata aagatgaact ggtcacaata agcgcgctga aagtgcctca
     2941 ttcccctttc ccggacggtg aagcgtttgc ttaccgtttt gatactcagg gtaagcgaat
     3001 cgtcttctct ggcgatacgt cctggtttcc tccgcttgca acgtttgccc agggggcgga
     3061 tatcctggta catgaggcgg tacatgtccc ttcggtagca aaactggcta atagtattgg
     3121 caacggaaaa acgctggctg aagcgattgc gtcgcatcac accacgattg aagatgtcgg
     3181 taagattgct cgcgaggccc acgtgaaaaa actggtgtta agtcatctgg tgcctgcgac
     3241 ggttgcggat gacgtctggc aacaggaagc catgaaaaat tacccgggcc ctgtcattgt
     3301 cggtcatgac aatatgacga taagcgtacc gtaagcatca gggcaggggt aaaccaacgg
     3361 gctgacatca tgtcagcccg ttatgctttt ggcgatcagc atgacgcgca gagcttttgt
     3421 ctaaaacatt attttttcta aacactactt gctgattttt atgcacaata aaggtaagat
     3481 gattgctctg gtgaaatatc actaaataag aatgtcacgg atggaattta tacagtgtta
     3541 aaagcaatgc gtttctttgt ctgccggcca tcagtaatat cctctgtacc ggctcctcgt
     3601 tgccaaagtg aaggttagat taaacgaatc aaaaaatatc cgaactgtac aatttttata
     3661 tcaaacatat ttaactgcaa aatactgcaa acgtgcgcga atacacttaa tcagtagtat
     3721 ggctaatgca tactttattt cctaaacttt cttattatct atttgaatat ttctggttaa
     3781 accaaatgga caaacggata ccagacactc gaaaggataa ctgcaagctt ctggtttagg
     3841 attgcagtta ccaggacagt ggctattttc tttaagcgat ttccatagaa caggattaaa
     3901 cctggtaacg ttgtaaacag taacgggata aagtttatcg tttattaaga cccccttatt
     3961 aaaggggatg ataatgctac ctggaggcat gtaaacatct gcttgatacc ataaggtcaa
     4021 tctaagattt tttaggctat gtatgcatga gaacgacact ccggtagagg gacttataac
     4081 tgtatcaacg accttccatt ccattacaga aaccttttaa gtgaaatagt caatggtgta
     4141 aattacattt tccgcaagcc tattcaggat agatgaaaat ctgagaaaca taactcgttg
     4201 aaaacgatcg ttttttattg accactctat ttatattgat tttttaataa gttatttatt
     4261 ttatgctctt attttgttta cattctatta catttttgta ttttatacgt ggtgtaaata
     4321 ttgggcggta gtggatgtta taacgctcaa ttattaaact gtaagtgact gttgtatttc
     4381 ttatttataa ataccgcaac ctgtaagcgc agcggtacat tttacccggc attgacaggg
     4441 agaagatacg tatcaaccag agagtacaaa acagtgaaag aatatattct tcaggcaata
     4501 aatgatcgct aacgtgtaaa aataaccgac gaatctaaaa aatgtgagcg tgtggctggt
     4561 ctttatttaa acgatgatct tcgcaatggc gcattaatgg ctgacattgg cggttcgttg
     4621 atcggcttgt gcgcggtgaa aggctatatt tcttccgttg cgggaagtat gtcagaggca
     4681 ttctggtatt ataccgggtg tatgtaaatc cggggtgggc agaaagccca ccctcggttt
     4741 attgccttta tcgtggatta gggatgcgag ataaagcgag aaaggcgttg cagcagtaac
     4801 cggttttctt cgcgcagccg tgaattctct tccagcagcg ttaacgcgac cgcgatccct
     4861 ggccagtcga gcgccagctc ctcgcgtaag cgtagcgcgc gttgtaccac gctcgctgcg
     4921 cgatcgtcga attgccagtc ggcgttatcg tcttcgtaag gctcaattac gccaagtccg
     4981 acgatttcgt ttagctcctc ttccgtcacg ccggtgtgca aacaaaattc ggtgatggta
     5041 aaggtgacag tgatgttagc cattatgctt tcccccattg ctggcgtggg tcaaaggacg
     5101 actgcgcgtc cgccagttgt tgccacaggg cagctgtttt ctcgtcaggt ttcggcggca
     5161 taacgatttt gatgatggca tagagatcgc cagtgtgctt tttactggct aatccttttc
     5221 ctttgatacg cagccgctga cctgcctggc tgccgggggg aatggtcagc aaaatacgct
     5281 ctttaagcgt tggcacagac accttagcgc cgagcgccgc ctcccatggg gcaagcggaa
     5341 ggacgacttc cagatcctga ttgacgatat caaagagcgg atgcggggca atatggataa
     5401 cgagccataa atcgccatta ggtccgccgt tttcccccgg cgtgccctgg cctttcagtc
     5461 tgattcgttg cccgttgctg acgccagccg ggattttcac attcaatgtt ttgggaattt
     5521 cccgctccac caggccgaac gcgttataaa cggggacgga atagctaatc gtacgctggt
     5581 gctcttccag cgtttcttcc aggaataccg ccacttcaat ttcgatatca tgaccgcgtg
     5641 cggcgtggcg gtggtgcgaa tgacgaccgt gctgaccaaa aatagacgag aaaatatcat
     5701 caaaatcttc ggcgttatac ggctggcctt cgtgttgctg gaactggcga ttaaattgtg
     5761 gatcgttacg gtgttgccat aactggtcat actcggcgcg ccgttgctca tcactcagca
     5821 cttcccatgc ttcagcaacc tctttgaaac gggcttcggc atcgggttct ttgctgacat
     5881 ctggatggta cttgcgggcc agtcggcgat aggcggtctt aatcgtcttg agatcgtccg
     5941 tcggtttcac gcccataatg gcgtaataat ccttaagttc catagcatca tctcgctaaa
     6001 tcaatacata cagaagggac cccaaaaagg tttctccact aagtgtaggg taaacctgaa
     6061 aagtgcgtat gaaaacacca gttatatcat tagtaagaat aaattacgtt gttcgactat
     6121 cagaaggttg cgcagcgcgc cgacataact ttacagggga aaggttgcca aaaccgcgcc
     6181 agtggctaag ataactcgcg ttaaacagtg agggcgcaat ggcgaaacaa caacggatgg
     6241 gctggtggtt tctttgcctt gcatgtgtcg tggtaatggt ttgtaccgcg caacgcatgg
     6301 cgggcctgca cgccttgcag atgcaggcga cggcctctgc tgcggtggtc agcgctccct
     6361 cctcgacaga tgacggctcg ccggtcactc cctgcgaatt aagcgccaag tcgctgctgg
     6421 cggcgcctcc agtactcttt gaaggtgcta tccttgcgct ttatctactg ctttccttac
     6481 tggcgcctgt ccgggtcatg cgcctgccgt tttcgcctcc acgggctatt tcgccgccca
     6541 cattacgggt acatctacga ttttgtgtct tccgtgaatg acagaccggt tattactaac
     6601 ggttaattac tcattcacgg agaaaaaata tgatgatttt attcaggcgg atactgttct
     6661 gcctgttatg gctttggctg cccgtctcct gggcggcgga aagcggctgg ctgcgttcgc
     6721 ccgataacga ccatgccagc atacggctac gtgccgatac gtccgctaac agtgagaccc
     6781 ggctgttgct ggatgtcaaa ctggaaaacg gctggaaaac ctactggcgc gcgccggggg
     6841 aagggggcgt ggcaccctct atcgcctgga aaggcgacat gcctgaggta agctggttct
     6901 ggccaacccc ctcgcgcttt gatgtggcga atatcaccac ccagggatat cacgacgagg
     6961 tgacctttcc gatgatcgtg cgcggtacgc cgccggcgac cttgcgcggt gtgttgacgt
     7021 tatcaacctg cagcaatgtt tgtctgttga ccgattaccc cttttccgtg acgcccactg
     7081 tgcagaatgc cgattttgcc catgactatg cgcgggcgat gggtaaagtt ccgctccgca
     7141 gtgggctaac ggactcgctt gacgttggct atcgcccggg agaactggtg gtcactgcta
     7201 cgcgagcggc gggctggtca tcgcccgggc tctatcttga caccatagat gacgtcgatt
     7261 ttgcgaagcc tcgcctgcgc gtagagggcg acaggttaca ggcgacggtg ccggtgacgg
     7321 acagttgggg cgaaaaggcg cccgatttgc gcgacaaatc gctgaccctc gtgttagccg
     7381 atggcgctat cgcccaggag agcacgcaaa ccattggcgc tgcgccagcg caaacgccgg
     7441 acaatgcggc gctacctttc tggcaagttg taatgatggc gctaatcggc ggactgattc
     7501 ttaatttaat gccctgcgta ctgcctgttc tgggcatgaa acttggctct attttattgg
     7561 tagaggaaaa aagccgctct cacatcaggc gacaattttt ggcttcggtc gccggtatca
     7621 ttgcgtcatt tatggcgctg gcggcgttta tgaccctcct tcgcctgtca aaccatgcgc
     7681 tggcctgggg agtccagttc cagaatgcat ggtttattgg ttttatggcg ctggtgatgt
     7741 tgttgtttag cgccagcctg ttcgggcttt ttgagttcag gcttccctca tctatgacca
     7801 cgaaactggc cacttacggc ggtaacggta tgtcgggaca tttctggcag ggggcg
//
LOCUS       DAGWFR010000177         7836 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.179, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000177 DAGWFR010000000
VERSION     DAGWFR010000177.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 7836)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7836)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7836
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.179"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            54..620
                     /locus_tag="MOX77_003872"
     CDS             54..620
                     /locus_tag="MOX77_003872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016529756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HCA3359276.1"
                     /translation="MLIGYVRVSTNDQNTDLQRNALSCAGCERIFEDKISGTKSDRPG
                     LKKLLRTLSAGDTLVVWKLDRLGRSMRHLVTLIEELRQRGVNFRSLTDSIDTSTPMGR
                     FFFHVMGALAEMERELIVERTRAGLAAARAKGRVGGRRPKLTSEQWAQIGRLLEAGES
                     RQRIALIFDVGVSTIYRKFPANKNNKSP"
     gene            763..1935
                     /locus_tag="MOX77_003873"
     CDS             763..1935
                     /locus_tag="MOX77_003873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath protein"
                     /protein_id="HCA3359277.1"
                     /translation="MAQDYHHGVRVVEVNEGTRSITTVSTAIVGMVCTGDDADAKMFP
                     LNKPVLITDVLTASGKAGESGTLARSLDAIADQAKPVTVVVRVPQGETEEETTTNIIG
                     AVTAEGKKTGMKALLSAQSQLGVKPRILGVPGHDTKAVATELLSVAQSLRGFAYLSAY
                     GCKTVQEAITYRENFSQREGMLIWPDFTGWDTVLNAEATAYATARALGLRAKIDEQTG
                     WHKSLSNVGVNGVTGISADVFWDLQDPATDAGLLNQNDVTTLVRKDGFRFWGSRCLSD
                     DPLFAFENYTRTAQVLTDTMAEAHMWAVDKPLNPSLARDIIEGIRAKMRSLVSQGYLI
                     GGDCWLDESVNDKDTLKAGKLTIDYDYTPVPPLENLMLRQRITDQYLVNFSSQVSA"
     gene            1945..2460
                     /locus_tag="MOX77_003874"
     CDS             1945..2460
                     /locus_tag="MOX77_003874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major tail tube protein"
                     /protein_id="HCA3359278.1"
                     /translation="MALPRKLKHLNLFNDGNNWQGIVESLTLPKFTRKYEKYRGGGMP
                     GAVDVDLGLDDGALDTEFSIGGTELLLFKQMGKATVDGIQLRFTGSIQRDDTGEVQAV
                     ELVVRGRHKEVDSGEWKTGESNTTKVTSTNSYAKLTINGEVLYEVDLINMVEIVDGVD
                     LMEAHRNALGL"
     gene            2515..2817
                     /locus_tag="MOX77_003875"
     CDS             2515..2817
                     /locus_tag="MOX77_003875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly protein"
                     /protein_id="HCA3359279.1"
                     /translation="MSDKKTEKTIQLDTPIKRGKTEITEIVLRKPQSGALRGTRLQAI
                     MDMDVNAMMTVIPRISSPALTAQEIAEMDPADLTAMSVEVVTFLLKKSVLAGLPTA"
     gene            2832..2951
                     /locus_tag="MOX77_003876"
     CDS             2832..2951
                     /locus_tag="MOX77_003876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GpE family phage tail protein"
                     /protein_id="HCA3359280.1"
                     /translation="MADIATIFHWPPSVTDVMPLTEVLEWRYKAIQRSGANDE"
     gene            2944..6021
                     /locus_tag="MOX77_003877"
     CDS             2944..6021
                     /locus_tag="MOX77_003877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001282780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HCA3359281.1"
                     /translation="MSDNNLRLQVILNAVDKLTRPFRSAQASSRELAAAVKKSRDAIK
                     QLDQAGSSLDSFRKLQAENQKLGDRLNYARQRANLLSQELGAMGPPSQRQVVALGRQR
                     LAVQRLEERQKKLQQQTALVRAELYRAGISAKDDAGATARLARETSRYNQELSKQEAR
                     LKRLGEAQRRMNVARASYARSLEVRDRIAGAGATTTAAGLAMGTPVMAAVKSYTSMED
                     AMKGVAKQVNGLRDDNGNRTARFYEMQDAIKAASEQLPMENGAVDFAALVEGGARMNV
                     ANPDDSWEDQKRDLLAFASTAAKAATAFELPADELSESLGKIAQLYKIPTRNIEQLGD
                     ALNYLDDNAMSKGADIIDVMQRLGGVADRLDYRKAAALGSTFLTLGAAPEVAASAANA
                     IVRELSIATMQSKSFFEGMNLLKLNPEVIEKQMTKDAMGTIQRVLEKVNALPQDKRLS
                     AMTMLFGKEFGDDAAKLANNLPELQRQLKLTAGNDALGSMQKESDINKDSLSAQWLLV
                     KTGAQNTFSSLGETLRQPLMDILYMVKSVTGASRRWVEANPELTGTLMKVAAVVAAVT
                     VGLGTLAVALAAVLGPLAVIRLGFSVLGIKTLPSVTAAVTRTSSALSWLAGAPLALLR
                     RGLASSGNAAGLLTAPLSSLRRTASLTGNVLKTVAGAPVALLRSGLSGLRAVAVMFMN
                     PLAALRGGLAAAGAVLRVLASGPLAMLRIALYAVSGLLGALLSPIGLVVTALAGVALV
                     VWKYWQPITAFLGGVVEGFKAAAGPISAAFEPLKPVFQWIGDKVQALWGWFTDLLTPV
                     KSTSAELQSAAAMGRRFGEALAEGLNMVMHPLDSLKSGVSWLLEKLGIVSKEAAKAKL
                     PESVTRQQPATVNADGKVMMPSGGFPSWGYGFAGMYDSGGYIPRGQFGIVGENGPEIV
                     NGPANVTSRRNTAALAAVVAGMMGVAAAPAELPPLHPLAFPAKGGEAMVSRAATVSPV
                     QRIEAPTQIIIQTQPGQSVQDIAREVARQLDERERRLKAKARSNYSDQGGYDA"
     gene            6018..6503
                     /locus_tag="MOX77_003878"
     CDS             6018..6503
                     /locus_tag="MOX77_003878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCA3359282.1"
                     /translation="MMMVLGLYVFMLRTVPYQELLYQRSWRHAANSRVNRRPSTQFLG
                     PDNDMLTLSGVLMPEITGGRLSLLALEQMAEQGKAWPLIEGSGTIYGMYVIEGLNQTK
                     TEFFRDGMPRRIEFTLSLKRVDESLSDMFGDLSAQLNNLQDTVTSALSDISKTVGGLL
                     S"
     gene            6500..7600
                     /locus_tag="MOX77_003879"
     CDS             6500..7600
                     /locus_tag="MOX77_003879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage late control D family protein"
                     /protein_id="HCA3359283.1"
                     /translation="MNFSSELLNKGNKTPAFSISIEGKDITTVLDNRLMSLTLTDNRG
                     FEADQLDLELDDADGKIVLPRRGAVITLALGWKGQPLFPKGAFTVDEIEHTGAPDRLT
                     IRARSADFRETLNTRREKSWHKTTVGEVVKEIAARHKLKMALGEDLSDKPVEHIDQTN
                     ESDGSFLMRLARQYGAIASVKNGNLLFIRQGQGKSASGKPLPVITITRKDGDSHRFTL
                     ADRGAYTGVIASWLHTREPAKKESTTVKRKRRTKKQKKEPEAKQGDYLVGTDENVLVL
                     NRTYANRSNAERAAKMQWERLQRGVASFSLQLAEGRADLYTEMPVKVSGFKQPIDDAE
                     WTITTLTHTVSPDNGFTTSLELEVRIDDFEME"
     gene            7691..>7836
                     /locus_tag="MOX77_003880"
     CDS             7691..>7836
                     /locus_tag="MOX77_003880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ogr/Delta-like zinc finger family protein"
                     /protein_id="HCA3359284.1"
                     /translation="MMICPLCGSAAHTRSSFQVSSLTKERYNQCQNINCSHTFVTHET
                     FVRS"
BASE COUNT         1885 a         1931 c         2374 g         1646 t
ORIGIN      
        1 cagagataac ggctaactgg catcatctcc ggtttttatt cagggggatg atcatgctta
       61 ttggctatgt acgcgtgtca acaaatgacc agaacaccga tttgcaacgc aatgcactga
      121 gctgtgcggg atgtgagcgg atttttgagg ataaaatcag tggcaccaag tccgacagac
      181 cggggctgaa aaagctgctc aggacactat cggcaggaga cacgctggtt gtctggaagc
      241 tggacagact ggggcgcagt atgcggcatc ttgttacgct gatagaagag ctgcgccagc
      301 gtggcgtgaa tttccgaagc ctgactgaca gtattgatac cagcacccca atgggccgtt
      361 tcttttttca tgtcatgggt gccctggctg aaatggaacg cgaactgata gttgaacgta
      421 ccagggcggg gctggctgca gctcgtgcta aaggcagagt aggtggacgc cgtcctaagt
      481 tgaccagcga acagtgggca cagattgggc gtttactcga ggccggagaa tcaagacagc
      541 gtattgcact gatttttgat gtaggcgttt ctaccattta tcgaaaattt ccggcaaata
      601 agaacaataa atctccctga atcagcttta ttttgattat ccctgaaagc agacaaatac
      661 cgtcattttg tgtgaataac ggtacaactg cgcttagctg tttgtcaggc acaatcactt
      721 caacataggg cgaagcctaa tccaatcagg aggttcgcca ctatggctca ggattaccac
      781 cacggggtgc gcgttgttga agtcaacgaa ggcacccgat ccattaccac ggtgagcacc
      841 gccatcgtgg gtatggtctg cacgggcgat gatgccgatg caaaaatgtt tcctcttaat
      901 aaacccgtgc tgatcactga tgtgctgact gccagcggta aagcgggtga gtcaggcacg
      961 ctggcccgtt cgctggatgc catcgctgac caggcaaaac ccgtgaccgt tgttgtgcgt
     1021 gtgccgcagg gtgaaacgga agaagaaacc acgaccaata tcatcggcgc agtgaccgct
     1081 gaaggtaaaa aaacaggcat gaaagccctg ttatctgccc agtcacagct tggcgttaaa
     1141 ccgcgcattc tcggcgtgcc aggccacgac accaaggcgg tagctactga gttgctgagc
     1201 gtggcgcaaa gcctgcgtgg atttgcttac ctgtcagcgt atggctgcaa gacggtacag
     1261 gaggcgatca cttaccgtga aaacttcagc cagcgcgaag ggatgctgat ctggcctgac
     1321 tttactggct gggacactgt gctgaatgcc gaagcaacgg catatgccac cgcccgtgcg
     1381 cttggtctgc gcgccaaaat tgacgagcag accggatggc acaaaagcct gtccaacgtg
     1441 ggcgtgaacg gtgtcaccgg aatttctgct gatgtgttct gggatctgca ggacccggca
     1501 accgatgcgg gactgctgaa ccagaacgac gtcaccacgc ttgtgcgtaa agacggtttc
     1561 cgcttctggg gttcccgctg cctgagtgat gacccgctct ttgccttcga aaactacacc
     1621 cgcacggcgc aggtgctgac ggacacgatg gcagaagcgc acatgtgggc ggtggataaa
     1681 ccgctgaatc cgtcgctggc ccgcgacatt atcgagggta tccgcgccaa aatgcgcagc
     1741 ctggtcagtc agggctatct cattggtggt gattgctggc tggatgagtc ggtgaacgac
     1801 aaagacacgc tgaaagccgg aaaactcacc atcgactacg actacacgcc agtgccgcca
     1861 cttgaaaacc tgatgctgcg tcagcgcatc accgatcagt acctggtgaa tttctccagc
     1921 caggtcagcg cgtaagggga caacatggct ttaccacgca aattaaaaca cctgaacctg
     1981 tttaatgacg ggaacaactg gcaggggatc gttgagtcgc tgacgctgcc gaaatttacc
     2041 cgcaaatatg agaagtatcg cggcggcgga atgccgggtg cagtggatgt ggatctgggg
     2101 ctggatgacg gcgcactgga tacggaattt tccattggtg gtactgagct gctgctgttt
     2161 aagcagatgg gcaaagccac ggtggatggc atccagctgc gctttaccgg ctctattcag
     2221 cgtgatgata ccggggaagt gcaggccgtg gagcttgtgg tgcgtggacg tcacaaagaa
     2281 gtggattccg gcgagtggaa gacgggcgaa agcaacacca ccaaagtgac cagtaccaac
     2341 agctacgcga agctgaccat caatggtgag gtgctctatg aagtggacct gatcaacatg
     2401 gtggaaattg tggacggtgt ggacctgatg gaagcgcacc gtaacgccct cggcctctga
     2461 tgtatctgaa cggcgtggga taccgcgcca gaacccaatt tacaggacag caaaatgagc
     2521 gataagaaga ctgaaaagac cattcaactg gatactccca tcaagcgcgg aaaaacggaa
     2581 atcaccgaaa ttgtgctgcg taaaccgcag tccggtgcgc tgcgcggtac acgcctgcag
     2641 gccattatgg atatggatgt gaacgcgatg atgaccgtga tcccccgcat ctccagcccg
     2701 gcactgactg cacaggaaat tgcagagatg gacccggcag atctcactgc catgtcggtt
     2761 gaggttgtca cttttttgtt gaagaagtcg gtgcttgccg gtttaccgac agcctgacgg
     2821 ttgacgatct ggtggcagat atcgccacca tttttcactg gccgccatcc gttactgacg
     2881 ttatgccgct gaccgaagtg ctggaatggc ggtataaagc gattcagaga agcggggcca
     2941 acgatgagtg ataacaacct gcgtctgcag gtcattctta atgcggttga caagctcacc
     3001 cgcccatttc gatctgcgca ggccagttca agagaactgg ctgctgctgt caaaaaatcc
     3061 cgcgatgcaa taaagcagct tgatcaggcc gggagcagtc tggacagctt ccgaaagctg
     3121 caggcagaaa atcagaaatt aggcgacagg ctgaactatg cccgccagcg tgcaaatttg
     3181 ctcagtcagg aactgggagc gatggggccg ccttcgcaac gtcaggttgt tgctctgggc
     3241 cgtcaacggc tggctgttca gcgcctggaa gaacgccaga aaaagctgca gcagcagacg
     3301 gcgcttgtgc gtgctgaact gtaccgggcg ggaatttctg cgaaagatga tgcgggagca
     3361 actgcccgtt tagcccgtga aacatcacgt tataaccagg aactgtcgaa acaggaggcg
     3421 cggctgaagc gactggggga agctcagcgc aggatgaatg tggcgcgtgc cagttatgcc
     3481 cgttcgctgg aggtgcgcga tcgcatcgca ggagccggag ccaccaccac ggcggcaggg
     3541 ctggcaatgg ggacgccagt gatggcggca gtaaaaagct ataccagcat ggaagatgcc
     3601 atgaaaggtg tggcaaagca ggtcaatggt ctgcgtgacg ataatggcaa ccgcactgca
     3661 cgtttttatg aaatgcagga tgccatcaag gctgccagcg aacagttgcc gatggaaaac
     3721 ggtgcggtag acttcgctgc actggttgaa ggtggtgcgc gcatgaacgt cgcaaaccct
     3781 gacgacagct gggaagacca gaaacgtgac ctgctggcct tcgccagtac ggcagcaaag
     3841 gcggcaacag cctttgagct gccagcggat gaactgtcag aaagtctggg gaaaatcgcc
     3901 cagctctaca aaatccctac ccgcaatatt gaacagctcg gtgatgcgct gaactatctg
     3961 gatgataacg ccatgtcgaa aggggcagac attattgatg tcatgcaacg tctgggcggt
     4021 gtggctgacc gtctggatta tcgtaaagcg gcggcgctgg gttccacctt tctgacactg
     4081 ggcgctgcgc cggaggttgc agccagtgca gcaaacgcga tagtgcgtga attgtccatt
     4141 gccaccatgc aaagcaagag tttctttgaa gggatgaatc tgctgaaact caatcctgaa
     4201 gttattgaaa agcagatgac gaaggatgcg atgggaacta tccagcgtgt gctggagaag
     4261 gtgaacgcac tgccgcagga caagcgtctg tctgccatga ccatgttgtt tggtaaagag
     4321 tttggcgatg acgcggcgaa actggcaaac aacctgccgg aactgcagcg ccagctaaaa
     4381 ctgacagcgg gcaatgatgc gctcggctcc atgcagaaag aatccgacat taacaaggac
     4441 tcactttctg cgcagtggtt gctggtcaaa accggagcgc agaacacctt cagcagcctg
     4501 ggcgaaacgc tgcgccagcc gctgatggat attctgtaca tggtgaaaag cgtcacggga
     4561 gcatcgcgtc gttgggtgga agctaacccg gaactgacgg gcacactgat gaaagtagcc
     4621 gctgtggtgg ctgccgttac cgtgggcctc ggcaccttag cggtggcgct ggctgcagtg
     4681 ctggggccgc tggcagtcat ccgtctgggg ttctctgtgc tgggtatcaa aacgttacct
     4741 tccgttacgg cagcagtaac ccgaactagc agcgcgttgt cctggctggc tggcgcacca
     4801 ctggcactgc tgcgacgcgg gcttgcttca tcgggcaacg ctgcgggttt acttactgcg
     4861 ccgttgtcgt ctttgcgccg cacggcatca ctgacgggga atgtcctgaa aactgtagca
     4921 ggtgcgccgg ttgcactttt gcggtctgga ttatccggtt tacgtgctgt tgctgtgatg
     4981 tttatgaatc cactggcagc actacgcggt gggctggctg ccgcaggcgc ggtgctgcgt
     5041 gtgctcgcat ccggcccgct ggcgatgttg cgcattgccc tgtatgccgt atctggtctg
     5101 ttaggtgctc tgctcagtcc gataggtctt gtggttactg cactggcggg cgtggcgctg
     5161 gttgtctgga aatactggca acccatcacc gcatttctcg gtggcgtggt ggaaggattc
     5221 aaagcggcgg caggtcccat cagtgcagca ttcgaaccac ttaagcctgt gtttcagtgg
     5281 attggcgaca aagtgcaggc gttgtggggc tggtttactg atctgctgac gcccgttaag
     5341 tcgacctctg ccgaactgca gagcgcagcg gcaatggggc gacgattcgg ggaggcactg
     5401 gcggaagggc tgaatatggt catgcatccg ctggactccc tgaaatccgg cgtttcctgg
     5461 ttgctggaga aactcggtat tgtcagtaaa gaggctgcaa aggcgaaact gccggaaagc
     5521 gtgacgcgtc agcaacctgc gacggtgaat gcagacggta aagtgatgat gccatcaggt
     5581 ggtttcccat catggggata tggttttgcg gggatgtatg acagcggtgg gtatatcccg
     5641 cgcgggcagt ttggcattgt cggtgaaaac gggcctgaaa ttgtcaacgg cccggcaaac
     5701 gtgaccagcc ggagaaatac agctgcactg gctgccgttg ttgccggaat gatgggtgtt
     5761 gctgccgcgc cagcagagct tccaccgttg caccctttgg catttcccgc gaaaggcggt
     5821 gaagcgatgg tgagtcgcgc agccactgtg tcgcccgttc aacggattga ggcaccgacg
     5881 cagatcatca ttcagacgca gccaggacaa agtgtgcagg atattgcgcg ggaggtggcc
     5941 cgccagcttg atgaacgtga acgcaggctg aaggcaaaag ccaggagtaa ctacagcgat
     6001 caggggggat acgacgcatg atgatggtgc tgggattgta cgtgtttatg ctgcgcactg
     6061 tgccgtatca ggaactgctg tatcaacgca gctggcgaca tgcggcaaac agccgggtca
     6121 accgacgtcc atccacgcag tttctgggac cggacaacga catgctgacg ctttctggtg
     6181 ttcttatgcc ggagataacg ggcggcagac tgtcgttgct ggctctggag cagatggcag
     6241 aacagggaaa agcatggccc ctgattgaag gcagcggcac gatttacggc atgtatgtga
     6301 ttgagggact gaatcagact aaaacggagt ttttccgcga tggtatgccg cgccggattg
     6361 agttcaccct gtcgctcaaa cgggtggatg aatccctgtc cgatatgttc ggtgatctca
     6421 gtgcgcagct gaataatttg caggatacgg taacgtctgc cttaagcgat atcagtaaaa
     6481 cggtgggagg gctgctgtcg tgaatttcag ctctgaactg cttaacaaag gcaacaaaac
     6541 tcccgcattc agcatcagta ttgaggggaa ggatatcacc actgtgctgg ataaccgcct
     6601 gatgagtctg acgctgacgg acaatcgggg ctttgaagca gaccagcttg atttggagct
     6661 ggacgacgcc gacggaaaaa tcgtgctgcc gcgccgtggg gctgtcatta cgctggcgtt
     6721 gggctggaag gggcagccgc ttttcccgaa aggagcattc acggtggacg agattgaaca
     6781 cactggcgca ccggaccgcc tgactatccg ggcgcgaagt gctgattttc gtgaaaccct
     6841 gaatacccgc cgtgaaaaat cgtggcacaa gaccaccgtt ggggaagtgg tgaaggaaat
     6901 agctgcgcgg cacaaactga agatggcatt gggtgaagac ctgtcggata aacccgtgga
     6961 gcatatagac cagaccaatg agagtgacgg cagttttctg atgcggctgg cgcgccagta
     7021 cggtgctatt gcgtcggtga aaaatggcaa tctgttattc atccggcagg gacagggtaa
     7081 aagcgccagc ggtaaaccac tgccggtgat cactatcaca cggaaggacg gcgacagtca
     7141 ccgctttacc ctggcagatc gcggagccta cacgggcgta attgccagct ggttgcatac
     7201 ccgcgaaccc gcgaagaaag aaagcaccac ggtgaagcgt aagcgcagga ctaagaagca
     7261 gaagaaagag ccggaagcga agcagggcga ttacctggtg gggacggatg aaaacgtgct
     7321 ggtacttaat cgcacttatg ccaaccggag caacgccgaa cgagcggcga aaatgcagtg
     7381 ggaacgcttg caacgcggcg ttgcgtcatt ctcgctacaa ctggcggaag gtcgggcaga
     7441 tctctacacg gaaatgcctg tgaaggtcag tggctttaaa cagccgatag atgatgcgga
     7501 atggaccatt accaccctga cacatactgt cagcccggat aatggtttta cgaccagtct
     7561 ggagcttgaa gtgaggattg atgatttcga aatggaatga ttcttcgcaa tggagaactt
     7621 ttaagtttgc aaaatggaat aatgcggtat cattattgtg aatttagcaa aaatggggag
     7681 agctcgaaaa atgatgattt gcccactgtg tggaagtgcc gcccatactc gcagcagttt
     7741 tcaggtatct tcattgacca aagagcgtta caaccagtgc cagaacatta actgcagcca
     7801 tacttttgtt acccatgaaa cttttgttcg ttcgat
//
LOCUS       DAGWFR010000178         7698 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.180, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000178 DAGWFR010000000
VERSION     DAGWFR010000178.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 7698)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7698)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7698
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.180"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..967
                     /locus_tag="MOX77_003881"
     CDS             <1..967
                     /locus_tag="MOX77_003881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HCA3359285.1"
                     /translation="NDPPVRMLWVACKNPFAQDFDRSKMKKAFEKLEMVVCADQFFNE
                     TVQHADIVLPVTTAFEEWNVDASYWHYWLSINQPAIKPMYEAKCDLEIATMLSRTINK
                     MAPGSCTFPQEFDHKRWLDQEFNDGMAKMFGISSWDDLLDGPKKAILPSSAAWYDRKF
                     KTPSGKYEFKSELAEKNGHTALPEYKPEAESKLPFHLFTPHVQFGLHSQFINLDWMQV
                     FYPEPFVYIHPSSAKKKGISENDRVKVFNNIGEVELRAKVTTNVPEDFLVMYEAWFPK
                     RQYNVQNVVADTPADMGLMKTGAPGAAIHSQFADVVLIGKGESVA"
     gene            964..1521
                     /locus_tag="MOX77_003882"
     CDS             964..1521
                     /locus_tag="MOX77_003882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HCA3359286.1"
                     /translation="MRRAFLVNSDKCIGCRGCAMACKSFNQLEPDRFWRYVYPLDKDI
                     YPHEERAFYSLACNHCEHPACVAACPVEAYTKREDGVVVHNPERCIGCKNCIRNCPYG
                     APRFNEETRKAEKCSICYERLDIGMNPACVNACPVGALSIIDLDADPVPDNAVQYPPG
                     FPHMPQLNPGTRFILARQPKQPEDK"
     gene            1521..2288
                     /locus_tag="MOX77_003883"
     CDS             1521..2288
                     /locus_tag="MOX77_003883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dimethyl sulfoxide reductase anchor subunit
                     family protein"
                     /protein_id="HCA3359287.1"
                     /translation="MEKYELPLVFFTVLSQMSVGMALVLTWRTLRGEVEGQRFYWLAT
                     GLVLALASIAAILHLAHPDRAYNALINLRHAWLSREILGATLFGAAVGVTFLAKGHKA
                     MALIASVFGVLLVAVQGMTYAAPAMVAIANGFTMLLFFITVWVMGCAAIPLLRLRPAV
                     PALRQGIVVCIAVLIAAPLVWLSGGTVMQMTARSWLASPFYLASLVCLALAFVASRHG
                     DSRPKLLFVLLFVGVFLSRLVFFGDTVSTIVNIGHLY"
     gene            complement(2356..2784)
                     /gene="uspG"
                     /locus_tag="MOX77_003884"
     CDS             complement(2356..2784)
                     /gene="uspG"
                     /locus_tag="MOX77_003884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspG"
                     /protein_id="HCA3359288.1"
                     /translation="MYKTIIMPVDVFEMELSDKAIRHAEFLAQQDGVIHLLHVLPGSA
                     SMSLHRFAADVRRFEEHLQHEAETRLQTMVGHFSIDPSRIKTHVRFGSVRDVVNEMGE
                     ELDADVVVIGSRNPSITTHLLGSNASSVVRHATLPVLVVR"
     gene            3007..4245
                     /locus_tag="MOX77_003885"
     CDS             3007..4245
                     /locus_tag="MOX77_003885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-dependent formaldehyde
                     dehydrogenase"
                     /protein_id="HCA3359289.1"
                     /translation="MKALTYHGPHHVKVENVPDPGIEQPDDIILRVTATAICGSDLHL
                     YRGKIPQVKHGDIFGHEFMGEVVETGHDVKNIRKGDRVVIPFVIACGDCFFCRLQQYS
                     ACENTNDGHGAAMNKKQIPPPAALFGYSHLYGGVPGGQAEYVRVPKGNVGPFKVPPLL
                     SDDKALFLSDILPTAWQAAKNAQIQQRSSVAVFGAGPVGLLTIACARLLGAEQIFVVD
                     HHAWRLRFAEERYGAIPINFDDENDPAEKIIEQTAGHRGVDAVIDAVGFEAKGSMTET
                     VLTNLKLEGSSGKALRQCIAAVGRGGVVSVPGVYAGFIHGFLFGDAFDKGLTFKMGQT
                     HVHAWLGELLPLIEKGLLKPEEIVTHYMPFEEAARGYEIFEKREEECRKVILVPGAMS
                     AQAAQKQATGVINPMPGGVV"
     gene            complement(4328..4738)
                     /gene="rnk"
                     /locus_tag="MOX77_003886"
     CDS             complement(4328..4738)
                     /gene="rnk"
                     /locus_tag="MOX77_003886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside diphosphate kinase regulator"
                     /protein_id="HCA3359290.1"
                     /translation="MSRPTIIINDLDAERIDRLLEQPAYADLPIADALNAELDRAQMC
                     SPQEMPNDVVTMNSRVKFRNLSDGETRVRTLVYPANMTDSSTQLSVMAPVGAALLGLR
                     VGDTIHWELPGGASTHLEVLELEYQPEAAGDFLR"
     gene            complement(4973..5779)
                     /gene="rna"
                     /locus_tag="MOX77_003887"
     CDS             complement(4973..5779)
                     /gene="rna"
                     /locus_tag="MOX77_003887"
                     /EC_number="4.6.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease I"
                     /protein_id="HCA3359291.1"
                     /translation="MNTIWHYSPLLAVLLTPIFAANADELQAQQYGDFTDYVLALSWQ
                     TGFCQSQHERRHREPDECRLQKEPANKADFLTVHGLWPGLPKSIAARGVDQRRWQRFG
                     CATRPIPNLPEVKASRKCSAPAPGLSPDIATALKEVMPGAGGNSCLERYEYAKHGACF
                     GFDPNAYFGTMIRLDKAIKDSALGQFLADNYGKTVSRAEFDSVVAQTWGQDNVKAVKV
                     NCHGNPAYLTEIQFSLKASMINAPLSSASFQPQPHPGNCGKQFIIDKAGY"
     gene            complement(5889..7394)
                     /locus_tag="MOX77_003888"
     CDS             complement(5889..7394)
                     /locus_tag="MOX77_003888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HCA3359292.1"
                     /translation="MSLSKDNIWKLLAPLVVMGVMLLIPVPDGMPPQAWHYFAVFVAM
                     IVGMILEPIPATAISFIAVTICVIGSNYLLFDASELADPAFKASKQALKWGLAGFSST
                     TVWLVFGAFIFALGYEVTGLGRRIALFLVKFMGKRTLTLGYAIVIIDILLAPFTPSNT
                     ARTGGTVFPVIKNLPPLFKSFPNDPSARRIGGYLMWMMVISTSLSSSMFVTGAAPNVL
                     GLEFVSKIAGVQISWLQWFLSFLPVGIILLIVAPWLSYVLYKPEVTHSAEVAAWAGGE
                     LKNMGRLSRKEWTLIGLVLLSLGLWVFGGKIINATAVGLLAVSLMLALHVVPWKDITR
                     YNSAWNTLVNLATLVVMANGLTRSGFIDWFANTMSTHLEGFSPDATVIVLVLVLVLVL
                     VLVLVLVLVFYFAHYLFASLSAHTATMLPVILAVGKGIPGVPMEQLCILLVLSIGIMG
                     CLTPYATGPGVIIYGCGYVKSRDYWRLGAIFGVIYIAMLLLVGWPILAMWN"
     gene            complement(7432..>7698)
                     /locus_tag="MOX77_003889"
     CDS             complement(7432..>7698)
                     /locus_tag="MOX77_003889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triphosphoribosyl-dephospho-CoA synthase"
                     /protein_id="HCA3359293.1"
                     /translation="LALLDTLLLLMSLNGDTNVASRGGADGLRWLQQQAAVLLHQGGI
                     RTPDDLVYLHRFDQQCIERNLSPGGSADLLIVTWFLAQISQVNH"
BASE COUNT         1851 a         1980 c         2099 g         1768 t
ORIGIN      
        1 caacgatccg ccggttcgta tgctgtgggt cgcctgtaaa aacccgtttg cccaggattt
       61 cgatcgcagc aagatgaaaa aagcgtttga aaaactggaa atggtggtct gcgccgatca
      121 gttcttcaac gaaacggtgc aacacgctga tatcgtgctg cccgttacca ccgcgtttga
      181 agagtggaac gtggatgctt cttactggca ctactggctt tccattaatc agccggcgat
      241 taagccgatg tatgaagcaa aatgcgacct tgaaatcgct accatgctgt cgcgcaccat
      301 taataagatg gcgccgggtt cctgtacctt cccgcaagag ttcgatcaca agcgctggct
      361 ggatcaggag ttcaacgacg gtatggcgaa aatgttcggc atctcttcct gggacgatct
      421 gctggacggg ccaaaaaaag cgatcctgcc aagctctgcc gcctggtacg atcgcaagtt
      481 caaaacgccg tcaggcaagt atgaatttaa atctgaactg gcggagaaaa acggccacac
      541 cgcgctgccg gaatacaaac cggaagccga gagcaaactg cctttccatc tgtttacgcc
      601 gcacgtgcag tttggcctgc actcgcagtt tatcaacctg gactggatgc aggtgttcta
      661 tccggaaccg tttgtttata tccatccttc ttccgcgaag aaaaaaggca ttagcgaaaa
      721 tgaccgggtc aaagttttca acaacattgg cgaggtggaa ctgcgggcaa aagtcaccac
      781 caacgtgccg gaagattttc tggtgatgta tgaagcgtgg ttcccgaaac ggcagtacaa
      841 cgtgcaaaac gtcgtggccg atacgcctgc tgatatgggg ctgatgaaaa ctggcgcgcc
      901 gggcgccgct atccacagtc agtttgctga cgttgtattg atcggtaaag gggaatccgt
      961 agcatgagac gtgcgttttt agtgaatagc gataagtgca tcggctgccg cggctgtgct
     1021 atggcgtgta aaagctttaa ccaactggag ccggatcgct tctggcgcta cgtttatccg
     1081 ttggataaag acatctatcc acatgaagag cgggcgtttt actcgctggc ctgtaaccac
     1141 tgcgaacatc cggcctgcgt cgccgcctgt ccggtcgaag cctataccaa acgtgaagat
     1201 ggcgtggtgg tgcataaccc tgagcgctgc atcggctgta aaaactgtat tcgtaactgt
     1261 ccttatggcg cgccgcgttt taatgaagag acgcgtaaag cggaaaaatg cagtatatgc
     1321 tacgagcgtc ttgatatcgg tatgaatccg gcgtgcgtga acgcctgtcc ggtgggcgcc
     1381 ttgtcgatta tcgatttgga tgccgatcct gtgcccgata atgcggtgca gtatccgcca
     1441 gggttcccgc atatgccaca gctcaatcca ggaacgcgct ttattctggc gcgccagcct
     1501 aagcagccgg aggacaagta atggaaaaat atgaactgcc gctggtgttt tttacggtat
     1561 taagccagat gtctgtcggg atggctttgg tactgacatg gcgtacgctg cgtggtgaag
     1621 tggaaggcca gcgtttctat tggttggcca ccgggctggt gctggcattg gcgtctattg
     1681 ccgcgattct gcatctggcg catcccgatc gcgcttataa tgcgctgatt aacctgcgac
     1741 atgcctggtt aagtcgggaa atccttggcg ccacgttgtt tggcgcagcg gtcggcgtaa
     1801 cgttcctggc aaagggacat aaagcgatgg ctcttatcgc ctccgtgttc ggcgtgttac
     1861 tggtggcggt gcaggggatg acctacgccg cgccagcgat ggtagctatc gctaatggat
     1921 ttaccatgct gttatttttt attacggtat gggtcatggg ttgcgcggcg attccgctgt
     1981 taagactcag gcctgccgtt cctgcgttac gccagggaat tgtggtgtgt atcgcggtac
     2041 ttatcgcggc gccgctggtg tggttaagcg ggggaacggt catgcagatg acggcgcgtt
     2101 catggctggc ttccccgttt tatctggcaa gcctggtttg ccttgcgctc gcttttgtcg
     2161 ccagccgtca cggtgattcg cgcccgaaac tcctgttcgt cttgttattc gttggcgtat
     2221 ttctgagtcg gctggtcttt tttggcgaca cggtgagtac tattgtgaat atcgggcatt
     2281 tgtactaacg atgatgcagt aaaaagccct gccaggcgtg acctggcagg gcgtgtcagt
     2341 ttttagccac cagggttaac gcacaaccaa tactggcagc gtcgcatggc gcaccacgct
     2401 tgaggcgtta gaccccaaca ggtgtgtcgt gatagacgga ttacgcgaac cgattaccac
     2461 gacatccgca tccagttctt cgcccatctc attgacgaca tcgcgcacgc taccaaagcg
     2521 aacatgcgtt ttaattcgtg aaggatcgat actgaagtgt cccaccatcg tttgcagacg
     2581 cgtttccgcc tcatgctgta aatgttcttc aaagcgacgc acgtcggcgg caaagcggtg
     2641 cagactcatg ctcgcggacc caggcagtac atgcaacaga tgaatgacgc catcctgttg
     2701 cgccagaaac tcagcgtggc gaatggcttt atcgctaagt tccatttcaa aaacatcaac
     2761 cggcataatg attgtcttat acatacccgt tactccctgt taatcaatac tgaatttatt
     2821 caagcatata ataatgtttc tttctgctat ttgtctggca attttaaata ttgcgacaac
     2881 ctgacgttaa aaaagtcgtg tattttccag gaaaaatcct aaagccgcct gtttttccgg
     2941 tagtctctcc gggatagcta cccttttata gtcgaacgca acattcaccg ttaccccgga
     3001 ggctgcatga aagcattgac gtatcacggt ccacatcacg taaaggttga aaacgtaccc
     3061 gatcccggca ttgagcagcc tgacgatatc attttgcgtg ttaccgccac cgcgatttgc
     3121 ggatctgatt tgcatctcta tcgcggcaag atcccacagg taaaacatgg tgatattttc
     3181 ggccatgaat ttatgggcga ggtggtggaa accggacatg atgtgaagaa tattcggaaa
     3241 ggggatcggg ttgttatccc gttcgtcatt gcttgtggcg actgcttttt ctgtcgacta
     3301 cagcaatatt cagcgtgtga aaacactaac gacggacacg gcgcggcgat gaataaaaaa
     3361 cagatcccgc cgccggcggc gctgtttggt tatagccatc tgtatggcgg cgttcccggc
     3421 ggacaggccg aatatgttcg cgtgccaaaa ggtaatgtcg gtccatttaa ggtgccgccg
     3481 ctgttatctg acgataaagc gctgtttctt tctgatattt tgcctaccgc ctggcaggcg
     3541 gcaaaaaatg cccagattca gcaacgttcc agcgtggcgg tttttggcgc agggccggta
     3601 ggattactga ctatcgcctg tgcgcgactg ctgggcgcgg agcagatctt cgtcgttgat
     3661 caccacgcct ggcgcctgcg tttcgccgaa gaacgttacg gcgcgatacc gatcaacttc
     3721 gatgatgaga acgatccggc ggaaaaaatc atcgagcaga cggcaggaca ccgcggcgtg
     3781 gacgcggtaa ttgatgccgt aggctttgaa gcgaaaggca gcatgacgga gacggtgctg
     3841 acgaacctta aactggaagg cagcagcggc aaagcgctgc gacaatgtat cgcggcggta
     3901 ggacgcggcg gcgtggtcag cgtgcccggc gtgtatgccg gttttattca cggcttttta
     3961 ttcggcgacg cctttgataa ggggctaact tttaaaatgg gtcaaaccca tgttcacgcg
     4021 tggctggggg aattattacc gcttattgaa aaagggttgc tgaagccgga ggagattgtc
     4081 acgcactata tgccgtttga agaggcggcg cgcggctacg aaattttcga aaaacgcgaa
     4141 gaagagtgcc ggaaggttat cctggtgccg ggagcgatgt cggcacaagc ggcgcagaaa
     4201 caggcgacgg gagtaatcaa cccgatgcca ggcggcgttg tctgaagcag gcagaaatga
     4261 aagagctaac ggaaagagga tgcgcaggca tcctctgtgt aaacgcatta acgcttatgc
     4321 agatggttta acgcaggaag tcgcccgcgg cttcaggctg atattcgagt tccagcactt
     4381 cgagatgggt ggaggcgccg cccggcagtt cccagtgaat ggtgtcgccg acgcgcagtc
     4441 ccagcaacgc cgcgccgacg ggcgccatta ccgaaagctg ggtactgctg tccgtcatat
     4501 tggcggggta caccagcgtc cgcacgcgtg tttcaccatc gctcaaattg cggaatttaa
     4561 cgcggctgtt catggtgacg acatcgttcg gcatctcttg tggcgaacac atttgcgcgc
     4621 gatccagttc ggcgttgagc gcgtcggcaa tcggcagatc cgcatacgca ggctgttcca
     4681 gaagacgatc aatacgttcg gcgtcaaggt cgttaatgat aatagtgggt ctggacattt
     4741 cttactccat gtcatcgata ctgcgagtag tgcaggtaaa tggtcccaaa agaaaaccct
     4801 caccgtctgg cggcgagggt ttaactctca tgatgatact gagacttacc ccgtctttga
     4861 agtgatttag ttcacattcg ggtaaatcct caaacgtcat agccctgagt gaattttagt
     4921 ctacattcgg gcgtgttctc aaatgtggct acggttttaa acctctgctt cgtcaataac
     4981 cggctttatc gataataaac tgtttcccgc agttgccggg atgcggctgc ggctggaatg
     5041 aggcagagga gagcggggcg ttaatcatcg acgcctttaa tgaaaactga atctctgtta
     5101 aataggcggg attgccatgg cagtttactt taacggcttt gacattatcc tggccccacg
     5161 tttgtgcgac gacgctatca aactcagcgc ggctaacggt cttgccgtaa ttatccgcca
     5221 gaaactgccc cagcgcgctg tcttttatcg ccttatccag ccgtatcatg gtgccgaaat
     5281 aggcattggg atcaaacccg aaacaggcgc catgtttggc atattcgtag cgctccagac
     5341 aggaattccc ccccgcgccg ggcatcactt ccttaagcgc tgtcgcgatg tcaggcgaaa
     5401 gtccgggggc gggggcggag catttccggc tggccttgac ttcaggcaga ttcgggattg
     5461 gccgcgtcgc acaaccaaag cgctgccagc gtctctggtc aacaccgcgt gcggcgatag
     5521 atttgggtaa tcctggccac aggccgtgga cggtcagaaa gtctgctttg ttggctggct
     5581 ctttttgcag acggcactca tcgggttccc gatggcggcg ttcatgctgg ctttgacaaa
     5641 aaccggtttg ccaggaaagc gccagcacat agtcagtgaa atcaccgtac tgttgcgcct
     5701 gaagttcgtc ggcgttggcg gcaaaaatcg gggttaagag gacagccagc agcggactgt
     5761 aatgccatat tgtgttcatg atgaattcga taatttatag acattatgaa tgttactcat
     5821 ttaatcataa aaaatgccgc tcaggtgaac ctgaacggca tcatttttaa cctacgttgg
     5881 cgtaatgttt aattccacat tgccagaatc ggccagccca ccagcaacag cattgcgata
     5941 tagataacgc caaagattgc gccaagccgc cagtagtctc tggatttcac gtaaccgcag
     6001 ccgtagataa tcacaccagg gccggtggca tacggcgtca gacagcccat gataccgata
     6061 gacagcacca gcagaataca cagttgttcc atcggaacgc ccggaatgcc tttacccacc
     6121 gccagaatga ccggcagcat ggtcgcggtg tgagcggaaa gactggcgaa caaatagtgc
     6181 gcgaaataga ataccagtac cagtaccagt accagtacca gtaccagtac cagtaccagt
     6241 accagtacaa tgacggttgc atccggcgag aaaccttcca gatgcgtact catggtattg
     6301 gcgaaccagt caataaagcc ggagcgggtt aagccattgg ccatgaccac cagcgtagcg
     6361 aggttcacca gggtgttcca ggcgctgttg tagcgcgtaa tatctttcca cggcacaaca
     6421 tgcagcgcca gcatcagcga gacggccagc agacccacgg cagtggcgtt gatgattttt
     6481 ccaccaaaaa cccacaatcc taagctaagc agcaccaggc caatcagcgt ccactctttg
     6541 cgggacagac gccccatgtt ttttaactcg ccgccagccc aggccgcgac ttccgcactg
     6601 tgggtcactt caggtttata aagcacatag gagagccacg gcgcaacgat cagtaaaata
     6661 atccctaccg gcagaaagct gagaaaccac tgcagccagc taatctggac cccggcgatc
     6721 ttgctgacga actccagacc taacacgttt ggcgccgcgc cagtgacaaa catcgaagag
     6781 ctcaggctgg tactgatcac catcatccac atcaaataac cgccgatgcg gcgtgcggaa
     6841 ggatcgtttg gaaacgattt aaacagcggc ggcaggttct tgataaccgg gaagacagtc
     6901 ccgccggtac gagccgtatt ggagggagta aacggcgcca gcaaaatatc gataatgaca
     6961 atcgcatagc cgagcgtcag cgtgcgttta cccatgaatt ttaccagaaa cagcgcaatg
     7021 cggcgcccca gtccggtcac ttcgtagccc agcgcgaaaa taaacgcgcc gaaaaccagc
     7081 cagaccgtgg tgctggagaa accggcaagc ccccatttca gcgcctgttt actggcttta
     7141 aacgccggat cggccagttc tgaagcgtca aatagcaggt aattgctgcc gataacgcaa
     7201 atggttacgg cgataaaact gatcgctgtc gccgggatcg gctccaggat cataccgaca
     7261 atcatcgcga cgaaaaccgc aaaatagtgc caggcctgcg gcggcatacc atctggaaca
     7321 ggaattagca acatgacgcc catcaccact aatggggcca acaacttcca tatattatct
     7381 ttggataaag acataaatga ctctccggaa aggatatttt ctataattgt gttaatgatt
     7441 aacttgcgaa atttgcgcta aaaaccaggt cacgatcagc agatcggcgc taccgcctgg
     7501 gctgagattg cgttcaatgc attgctgatc gaaccggtgg agataaacga gatcatcagg
     7561 cgtccgtatg ccgccctgat gtaataagac cgccgcctgc tgctgtaacc agcgcagacc
     7621 gtccgccccg ccgcgcgaag cgacgttggt atcgccgtta agcgacatca gcagcagtaa
     7681 ggtatcaagc agcgccag
//
LOCUS       DAGWFR010000179         7687 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.181, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000179 DAGWFR010000000
VERSION     DAGWFR010000179.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 7687)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7687)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7687
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.181"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..591
                     /locus_tag="MOX77_003890"
     CDS             <1..591
                     /locus_tag="MOX77_003890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TOBE domain-containing protein"
                     /protein_id="HCA3359294.1"
                     /translation="EPLSALDAQIRHNMVEEIARLHRELPELTILYVTHDQTEALTLA
                     DKIGIMKDGSLIAHGETRALYHHPPNRFAAEFLGRANILSAIALGITEVPGLVDVSCG
                     GAVIRAFSQGSHHGYNKLLCIRPQHLSLTPRSAYSNRFNATLQSVHWQGDLTHLLCDV
                     AGETVRMVLTHVNPLPRVGDKLALWFEPDDAVLIEV"
     gene            594..1463
                     /gene="phnU"
                     /locus_tag="MOX77_003891"
     CDS             594..1463
                     /gene="phnU"
                     /locus_tag="MOX77_003891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000052714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-aminoethylphosphonate ABC transporter permease
                     subunit"
                     /protein_id="HCA3359295.1"
                     /translation="MSLILPLEKPALNLRPLLWLLLPLLALATLFFWPLSLIVEQALR
                     GANGEIGLETFRQVVDSKRFVGALLNTLQIAFFATAGCLLLGSVMSLILVFIPFPGSE
                     LIGRVVDTFIALPTFLITLAFTFIYGSAGLLNGALMSLFAFELPPVDFLYSMQGVILA
                     EITVFTPLVMRPLMAALRQIDKSQLEAASILGAHPLRVIGQVIFPAALPALMASGSLC
                     LLLTTNEFGIVLFIGAKGVNTLPMMVYSKAILESDYTVACMIALINIVLSLGLFSLYR
                     LAASRTGVRSQPC"
     gene            1457..2248
                     /gene="phnV"
                     /locus_tag="MOX77_003892"
     CDS             1457..2248
                     /gene="phnV"
                     /locus_tag="MOX77_003892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-aminoethylphosphonate ABC transport system,
                     membrane component PhnV"
                     /protein_id="HCA3359296.1"
                     /translation="MLIWSPKGRAAAGVVASVLFIVFFFLPLAVILMSSLSQRWNGIL
                     PSGFTLNHFVNALHGAAWDALLASLTIGFCASLFALLCGVWAALALRQYGVKTQKWLS
                     MVFYLPSAIPSVSVGLGILVAFSQGPLQMNGTLWIVLTAHFVLISAFTFSNVSTGLAR
                     ISADIENVASSLGASPWYRLRHVTLPLLMPWMVSELALSLSLSMGELGATVMIYPPGW
                     TTLPVAIFSLTDRGNIADGAALTIVLVAITLLLMMKLERIAKRLG"
     gene            complement(2298..3746)
                     /gene="thiI"
                     /locus_tag="MOX77_003893"
     CDS             complement(2298..3746)
                     /gene="thiI"
                     /locus_tag="MOX77_003893"
                     /EC_number="2.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014168857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 4-thiouridine(8) synthase ThiI"
                     /protein_id="HCA3359297.1"
                     /translation="MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVV
                     RHWDNIEVRAKDENQRLAIRDALTRIPGIHHILEVEDVPFTDMHDIFEKALAQYREQL
                     EGKTFCVRVKRRGKHEFSSIEVERYVGGGLNQHIESARVKLTNPDVTVHLEVEDDRLL
                     LIKGRYEGIGGFPIGTQEDVLSLISGGFDSSVSSYMLMRRGCRVHYCFFNLGGAAHEI
                     GVRQVAHYLWNRFGSSHRVRFVAINFEPVVGEILEKVDDGQMGVVLKRMMVRAASKVA
                     ERYGVQALVTGEALGQVSSQTLTNLRLIDNVSDTLILRPLISYDKEHIINLARQIGTE
                     DFARTMPEYCGVISKSPTVKAIKAKIEAEEENFDFSILDKVVEEANNVDIREIAQQTQ
                     QEVVEVETVSGFGANDVILDIRSVDEQDDKPLKVEGVDVVSLPFYKLSTKFGDLDQSK
                     TWLLWCERGVMSRLQALYLREQGFANVKVYRP"
     gene            3956..4198
                     /gene="xseB"
                     /locus_tag="MOX77_003894"
     CDS             3956..4198
                     /gene="xseB"
                     /locus_tag="MOX77_003894"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HCA3359298.1"
                     /translation="MPKKNEAPASFETALSELEHIVTRLESGDLPLEDALNEFERGVQ
                     LARQGQAKLQQAEQRVQILLSDNEEASPEPFIADNE"
     gene            4199..5098
                     /gene="ispA"
                     /locus_tag="MOX77_003895"
     CDS             4199..5098
                     /gene="ispA"
                     /locus_tag="MOX77_003895"
                     /EC_number="2.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2E,6E)-farnesyl diphosphate synthase"
                     /protein_id="HCA3359299.1"
                     /translation="MDFTQQLQACVTQANQALSRFIAPLPFQNTPVVEAMQYGALLGG
                     KRLRPFLVYATGQMFGVSTATLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCH
                     IKFGEANAILAGDALQTLAFTIISDAPMPEVADRDRIAMIAELANASGIAGMCGGQAL
                     DLAAEGQRITLDALERIHRHKTGALIRAAVRLGALSAGDKGRNTLPILDRYAESIGLA
                     FQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARNKARDLIEDARQSLHQ
                     LAAQSLDTSALEALANYIIQRDK"
     gene            5122..6984
                     /gene="dxs"
                     /locus_tag="MOX77_003896"
     CDS             5122..6984
                     /gene="dxs"
                     /locus_tag="MOX77_003896"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HCA3359300.1"
                     /translation="MSFDIAKYPTLALVDSTQELRLLPKESLPKLCDELRRYLLDSVS
                     RSSGHFASGLGTVELTVALHYVYNTPFDQLIWDVGHQAYPHKILTGRRDKIGTIRQKG
                     GLHPFPWRGESEYDVLSVGHSSTSISAGIGIAVAAEKEGKDRRTVCVIGDGAITAGMA
                     FEAMNHAGDIRPDMLVILNDNEMSISENVGALNNHLARLLSGKLYSSLREGGKKVFSG
                     VPPIKELLKRTEEHIKGMVVPGTLFEELGFNYIGPVDGHDVMGLISTLKNMRDLKGPQ
                     FLHIMTKKGRGYEPAEKDPITFHAVPKFDPSSGCLPKSSGGLPGYSKIFGDWLCETAA
                     KDSKLMAITPAMREGSGMVEFSRKFPDRYFDVAIAEQHAVTFAAGLAIGGYKPVVAIY
                     STFLQRAYDQVIHDVAIQKLPVMFAIDRAGIVGADGQTHQGAFDLSYLRCIPDMVIMT
                     PSDENECRQMLFTGYHYNDGPTAVRYPRGNAQGVALTPLEKLPIGKGLVKRHGEKLAI
                     LNFGTLMPEAAKVAEALNATLVDMRFVKPLDDTLILEMAAQHDALVTLEENAIMGGAG
                     SGVNEVLMAHRKPVPVLNIGLPDFFIPQGTQEEARAELGLDAAGIEAKIKAWLA"
     gene            7041..>7687
                     /locus_tag="MOX77_003897"
     CDS             7041..>7687
                     /locus_tag="MOX77_003897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HCA3359301.1"
                     /translation="MQYNTLGNTDLRVSRLCLGCMTFGEPSRGNHAWTLPEESSRPII
                     KRALEGGINFFDTANSYSDGSSEEIVGRALRDFARRDEVVVATKVFHRVGDLPEGLSR
                     AQILRSIDDSLTRLGMEYVDILQIHRWDYTTPIEETLEALNDVVKAGKARYIGASSMH
                     ASQFAQALALQKQHGWAPFVTMQDHYNLIYREEEREMLPLCWQEGVAVIPWSPLAR"
BASE COUNT         1654 a         2128 c         2148 g         1757 t
ORIGIN      
        1 gaaccactgt cagcgctgga cgcacagatt cgtcataata tggtggaaga aatcgcccgt
       61 cttcaccgtg agctgccgga actcactatt ctctacgtca cccacgatca aacggaagcg
      121 ctcaccctgg ccgataaaat cggcattatg aaggatggct cgctgattgc tcacggcgaa
      181 acccgcgcgt tatatcacca tccgcccaat cgttttgccg ccgaattctt aggtcgcgcc
      241 aatattctct ccgccatcgc gctggggata acggaggttc cggggctggt ggacgtcagc
      301 tgcggcggtg cggtgattcg cgcgttcagc cagggcagcc accacggtta caacaaactg
      361 ctgtgcattc gtcctcagca cctcagccta acgccgcgtt cggcctacag caaccgcttc
      421 aacgccacac tgcaatcggt gcactggcaa ggcgatttaa cccatctgtt gtgtgacgtt
      481 gctggcgaaa cggtgcggat ggtgttgacg catgtcaatc cgctgccgcg cgtgggcgac
      541 aagctggcgc tgtggttcga accggatgat gcggtcctga ttgaggtata accatgtcac
      601 tcattttacc tctggaaaaa ccggcgctta acctacgccc gctgctgtgg ctgttgctcc
      661 cgttgctggc gctggcgacg ctgtttttct ggcctctgtc gctcatcgtt gaacaggcgc
      721 tacgcggtgc caatggcgag atcgggctcg agaccttccg ccaggtggtc gactcgaaac
      781 gctttgtcgg cgcgttgctg aacacgttgc aaatcgcctt tttcgccacc gccggttgcc
      841 tgctgctggg cagcgtgatg tcgctgattc tggtgtttat tcctttcccc ggcagcgagt
      901 tgattggtcg ggtcgtcgat acttttattg cgctgccgac cttcctgatt acgctggcgt
      961 tcacctttat ttatgggtca gcgggtctgc tcaacggtgc gctgatgagc ctgtttgcct
     1021 ttgagctacc gccggtggat tttctctact cgatgcaggg tgtcattctg gcggagatca
     1081 cggtgttcac tccgctggtg atgcggccac tgatggccgc gctgcggcaa attgataaaa
     1141 gccagctaga ggcagccagc attctggggg cacacccgtt acgggtgatt gggcaggtga
     1201 ttttcccggc ggcgctaccg gcgctgatgg ctagtggcag cctgtgcctg ctgttgacca
     1261 ctaacgagtt cggcatcgta ctgtttattg gcgcgaaagg ggttaacacc ctgccgatga
     1321 tggtttacag caaagcgatt ctggagtccg actatacggt cgcctgcatg attgcgttga
     1381 ttaacattgt cttgtcgctg gggctgttct ccctctatcg cctggcggca tcgcgtaccg
     1441 gcgtaaggag ccagccatgc taatttggtc acctaaagga cgcgcagcgg cgggcgttgt
     1501 ggctagcgta ctgtttatcg tgttcttttt cctgccgctg gcggtgattc tgatgtccag
     1561 ccttagccag cggtggaacg gtattctgcc gagtggcttc acgctgaacc actttgttaa
     1621 cgctctgcac ggtgcggcat gggatgccct acttgccagc ctcacgattg gcttttgcgc
     1681 cagcctgttt gcgctgcttt gcggcgtttg ggcggcgctg gcgttgcgtc aatatggggt
     1741 gaaaacgcag aaatggttaa gtatggtgtt ctatctgccg agtgcgattc cgtcagtgtc
     1801 cgtgggcctg ggcattctgg ttgctttcag ccaggggcca ttgcaaatga acggcaccct
     1861 atggattgtg ctgacagcgc actttgtgct gatttccgcc tttaccttca gtaacgtgtc
     1921 gaccggactg gcgcgcattt ccgccgatat tgaaaacgtc gcgtcgagtc tgggggcatc
     1981 gccctggtat cgtctgcgtc acgtgacgtt gccgttattg atgccgtgga tggtgtcaga
     2041 gctggcgctg agtttatcgc tctccatggg ggagttgggc gcgacggtga tgatttatcc
     2101 accgggctgg acgacgctgc cggtagctat ctttagcctg accgaccgtg gaaatatcgc
     2161 cgacggcgcg gcgctgacca ttgtgctggt ggccattacg ctgctgctga tgatgaagct
     2221 ggagcgcatt gcaaaacggt tggggtagaa ataaaacggt aggccgggta ggacatagcc
     2281 gccacccggc aaaggaatta cgggcgatac accttcacat tggcaaaccc ctgctcgcgc
     2341 agatagagcg cctgcaggcg actcattacg ccgcgttcgc accatagcag ccaggttttg
     2401 ctctgatcga ggtcgccaaa tttagtgctc agcttgtaga aaggcagcga aacgacgtcg
     2461 acgccttcca ctttcagcgg cttgtcatcc tgctcatcga cagaacggat atccagaatc
     2521 acatcgttgg cgccaaaacc gctcacggtt tcaacttcca ccacctcctg ctgggtctgc
     2581 tgggcgattt cacgaatatc gacgttgttc gcttcttcta ccaccttatc gagaatactg
     2641 aagtcgaaat tttcttcttc ggcttcaatt ttcgctttaa tggctttcac cgtcggactt
     2701 tttgaaatca cgccacagta ttccggcatc gtacgggcaa aatcttccgt accaatctgg
     2761 cgcgccaggt tgataatgtg ctctttatcg taagagatca gcgggcgcag gatcagcgtg
     2821 tcagacacgt tatcgatcaa gcgcaagttg gttagcgtct ggctggacac ctggcccagc
     2881 gcttcgccgg tcaccagcgc ctgtacgccg taacgttccg ccactttcga cgccgcgcgt
     2941 accatcatac gtttgagcac cacgcccatc tggccgtcgt cgactttctc cagaatctcg
     3001 ccgaccactg gttcaaagtt aatcgccaca aaacgcacgc gatgggagct gccaaagcgg
     3061 ttccacaggt aatgcgccac ctggcgaacg ccgatttcat gcgccgcgcc gccgaggtta
     3121 aagaagcagt agtgtacgcg acagccgcga cgcatcagca tatagctgga gacgctggag
     3181 tcaaaaccgc cggagatcag cgacagcacg tcttcctggg tgccaatcgg gaaaccgcca
     3241 ataccttcat aacgcccttt gatcagcagc aggcgatcat cttccacttc cagatgcacc
     3301 gtcacatccg ggttagtgag cttcacgcgc gctgattcaa tatgctgatt taatccgccg
     3361 ccaacatagc gctccacttc aatggagcta aactcatgct taccgcgacg ttttacccgc
     3421 acgcagaagg ttttgccttc aagctgttcg cgatactgcg ccaacgcttt ctcgaaaatg
     3481 tcgtgcatat cggtgaacgg cacatcttcg acttcaagaa tatggtgaat ccccgggatg
     3541 cgggtcagcg cgtcgcgaat cgccagacgc tggttttcat ctttggcgcg aacttcaatg
     3601 ttatcccagt gacggacaac cgcgagggtc tcatcgtagt gctttaaaac gttacggatg
     3661 ttcccggtta aaatttttat aaagcgcaaa cgcacagatt ggcttttgat agtgatttcc
     3721 gggaacaatt taatgataaa cttcatggcg gtaatggttc tttagcaagc tatctaaggc
     3781 ttgtcgtgga gaaatagtac agcagcccat acctacggct gcatccaggc gcggaagtat
     3841 atcaccatca cggacatctt gcgcatttcc ccttaccatt gcgcgttatt tgcttatcag
     3901 tgcgagtccg ttaccataga cttgtgctgc cattacagag agtcaaacag tcatcatgcc
     3961 gaagaaaaat gaggcgcccg ccagctttga aactgcgctg agcgagctgg aacatattgt
     4021 tacccgcctg gaaagcggcg atttgccgct ggaagacgcg ctgaatgaat tcgagcgcgg
     4081 cgtacaactg gcgcgtcagg ggcaggcaaa actgcagcag gcggaacagc gcgtgcaaat
     4141 tttgctgtct gataatgaag aggcttcacc tgagcctttt atcgcggata atgagtaaat
     4201 ggactttacg cagcagctac aggcttgcgt aacgcaagcg aatcaggcgc tgagccgttt
     4261 tatcgcgcca ctgccctttc agaacactcc cgtggtcgaa gccatgcagt atggcgcatt
     4321 attaggcggt aaacgcctgc ggccatttct ggtttacgcc accggtcaaa tgtttggcgt
     4381 cagtacggca acgctggatg cgccagctgc ggcggtcgaa tgcattcatg cctattcgct
     4441 gatccatgac gacctgccag caatggacga tgacgatttg cgtcgcggcc tgccgacttg
     4501 ccatattaaa tttggcgaag ccaacgcaat cctggcggga gacgcgttgc aaacgctggc
     4561 gtttaccatt atcagcgacg cgccgatgcc ggaagtcgcc gatcgcgatc gtatcgcgat
     4621 gatcgccgaa ctggcaaacg ccagcggtat cgccggtatg tgcggcggtc aggcattgga
     4681 tctggcggca gaaggccagc ggatcactct ggacgcgctg gaacgcattc atcgccataa
     4741 gaccggcgcg ctcattcgcg ccgccgttag acttggcgcg ttgagcgcgg gcgataaagg
     4801 acggaatact ctgccgatac ttgaccgcta tgcagagagt atcggccttg ccttccaggt
     4861 tcaggatgac attctggatg tggtgggcga tactgcaacg ttaggtaaac gtcagggcgc
     4921 agaccagcag cttggcaaaa gtacctaccc tgcacttctg ggtcttgagc aagcccggaa
     4981 taaagcccgg gacctgatag aggacgcccg tcagtcgtta catcagctgg ccgcgcaatc
     5041 actggacacc tcggcactgg aagcgctagc gaactacata atccagcgtg ataaataaac
     5101 cccatatcca atgagcttgc gatgagtttt gatatagcca aataccctac cctggcattg
     5161 gtcgactcca cccaggagtt acgactgtta ccgaaagaga gtctgccgaa actctgcgac
     5221 gagctacgcc gctacttact cgacagcgta agccgttcca gcgggcattt cgcttccggg
     5281 ctgggcacgg tagaacttac cgtggcgctg cattatgtct acaacacccc gtttgaccag
     5341 ctaatctggg atgttggaca ccaggcttat ccacataaaa tccttaccgg tcgtcgcgac
     5401 aaaatcggca ccattcgcca gaaaggcggt ctgcacccgt tcccgtggcg cggagaaagc
     5461 gaatacgatg tgctgagcgt tgggcattcc tccacctcca tcagcgccgg tatcggtatt
     5521 gccgtggcgg cggagaaaga aggcaaagat cgccgcaccg tctgtgtgat tggcgacggc
     5581 gccatcaccg ccggtatggc gtttgaagca atgaatcacg caggcgatat ccgacccgac
     5641 atgctggtca ttctgaacga caatgaaatg tcgatttcgg aaaacgtcgg cgcgctcaac
     5701 aaccatctgg cgcggctact ttccggtaag ctttactctt ctctgcgcga aggcggaaaa
     5761 aaagtcttct ccggcgtacc gccaattaaa gaactgctca agcgtaccga agaacatatt
     5821 aaaggcatgg ttgtgccggg aacactgttc gaagagctgg gctttaacta catcgggccg
     5881 gtcgatggtc acgatgtcat ggggcttatc agcacattga agaacatgcg tgacctgaaa
     5941 gggccgcagt tcctgcatat catgaccaaa aaaggccgcg gctatgagcc cgcggaaaaa
     6001 gatccgatca ctttccatgc ggtgcctaaa tttgatccct ccagcggatg tttgccgaaa
     6061 agcagcggcg gtctgccagg ttattcaaaa atcttcggtg actggctgtg tgaaaccgcc
     6121 gccaaagaca gcaagctgat ggcgatcacc ccggcaatgc gcgaaggttc cggcatggtg
     6181 gaattttcac gtaaattccc ggatcgctat tttgacgtcg ctatcgccga gcagcatgcc
     6241 gtcaccttcg ccgcaggtct ggcgattggc ggctataagc ccgtcgtggc gatctactct
     6301 actttcctgc aacgcgccta cgatcaggtc atccatgacg tcgctatcca gaaactgccg
     6361 gtcatgttcg ccatcgatcg cgccggtatc gttggcgcgg atgggcaaac acaccaaggc
     6421 gcgttcgatc tctcctatct gcgctgcatc ccggatatgg tgatcatgac gccaagcgac
     6481 gagaacgaat gtcgccagat gttatttacc gggtatcact ataacgacgg cccgacggca
     6541 gtacgttatc cacgcggtaa tgcgcagggc gtggcgctaa ccccgctgga aaaactgcct
     6601 attggtaaag gtcttgtgaa gcgtcatggc gaaaaactgg cgattctgaa ctttggcacc
     6661 ttaatgcctg aggcggcgaa agtcgccgaa gcgctgaatg ccacgctggt cgacatgcgc
     6721 tttgttaaac cgctggacga cacgttaatt ctggagatgg ccgcgcagca tgacgcgctg
     6781 gtgacgctgg aagaaaacgc cattatgggc ggcgctggca gcggcgtaaa cgaagtgcta
     6841 atggcccatc gtaaacctgt acctgtgctg aatatcggtc ttccggattt ctttatcccg
     6901 caaggaacgc aggaagaagc ccgcgcggaa ctggggcttg acgccgcagg cattgaagcc
     6961 aaaatcaagg cctggctggc ataatctcct ctttgctcct gctatgcttg aagagtgacg
     7021 ggtataacag gagcggagtc atgcaataca acacgttagg aaataccgat cttcgggtgt
     7081 cccgcctttg tctgggctgt atgacattcg gcgagccgag tcgcggcaat cacgcctgga
     7141 cgcttcccga agagagcagc cgtcccatca tcaagcgcgc ccttgagggc ggcattaact
     7201 tttttgatac cgccaacagc tactccgacg gcagcagcga agagattgtc ggtcgcgcgc
     7261 tgcgtgattt tgcccggcgc gacgaggtgg tggtagcgac gaaagtcttc catcgcgtcg
     7321 gcgatctgcc ggaaggattg tcccgcgcgc aaatcctgcg ctctattgac gatagcctca
     7381 cccgtctggg aatggagtat gtcgatatcc tgcaaatcca ccgctgggat tacaccacgc
     7441 cgatagaaga aactctggaa gcgctaaacg acgtggtaaa ggcgggtaaa gcccgctata
     7501 tcggcgcttc ctcaatgcac gcctcacaat ttgcccaggc gctggcgcta caaaaacaac
     7561 acggctgggc gccgtttgtc actatgcagg atcactataa cctgatctac cgcgaggaag
     7621 agcgtgagat gctaccgctg tgctggcagg aaggggtcgc cgtgattccg tggagtccgc
     7681 tggcgcg
//
LOCUS       DAGWFR010000180         7632 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.182, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000180 DAGWFR010000000
VERSION     DAGWFR010000180.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 7632)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7632)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7632
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.182"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..2164)
                     /gene="ybiO"
                     /locus_tag="MOX77_003898"
     CDS             complement(<1..2164)
                     /gene="ybiO"
                     /locus_tag="MOX77_003898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive channel protein"
                     /protein_id="HCA3359302.1"
                     /translation="MRWTLFILFCLLGAPAHAVAIPGVTTGTSTSQQAAPEPSPEQKK
                     AAYAALADVLENEASRNELIAQLREASTTPPTEPAPALAPPAAKDEKTVLENVTTVTR
                     QYGDAFATRFAQLYRNITDAPYKPFNSQTFTNALTHFLFLAVAVFGFYSVIRLCALPL
                     YRKMGLWARKKNRERSNWLQLPAMIAGAFIIDLLLLALTLFIGQMLSDNFHAGSRTIA
                     FQQSLFLNAFALIEFFKAILRLIFCPNVPELRPFAIQDATARYWNRRMSSLSSLIGYG
                     LIVAVPIISNQVNVQVGAMANVAIMLCITIWALYLIFKNKAEITQHLLSLAERSLAFF
                     SLFIRAFALVWHWLASAYFIVLFFFSLFDPGNSLKFMMGATVRSLAIIGIAAFISGMF
                     TRWIAKTITLSPHTQRNYPELQKRLNGWLSSALKVARFLTVCVAVMLLLNAWGLFDFW
                     HWLHYGAGEKMVDILIRIALILFFSAVGWTILASLIENRLASDIHSRPLPSARTRTLL
                     TLFRNALAVIISTITIMIVLSEIGVNIAPLLAGAGALGLAISFGSQTLVKDIITGVFI
                     QFENGMNTGDLVTIGPLMGTVERMSIRSVGVRQDTGAYHIIPWSSITTFANFVRGIGS
                     VVANYDVDRHEDADKANQALKDAVTALMETEDIRGLIIGEPTFAGIVGLTNTAFTLRV
                     SFTTLPLKQWTVRFALDSQVKKHFDLANVRAPVQTYQVL"
     gene            complement(2283..3005)
                     /gene="glnQ"
                     /locus_tag="MOX77_003899"
     CDS             complement(2283..3005)
                     /gene="glnQ"
                     /locus_tag="MOX77_003899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000569103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine ABC transporter ATP-binding protein
                     GlnQ"
                     /protein_id="HCA3359303.1"
                     /translation="MIEFKNVSKHFGPTQVLHNIDLNIRQGEVVVIIGPSGSGKSTLL
                     RCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGP
                     LRVRGVKKEEAEKQAKALLAKVGLAERAHHYPSELSGGQQQRVAIARALAVKPKMMLF
                     DEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDG
                     SPQALIENPPSPRLQEFLQHVS"
     gene            complement(3002..3661)
                     /gene="glnP"
                     /locus_tag="MOX77_003900"
     CDS             complement(3002..3661)
                     /gene="glnP"
                     /locus_tag="MOX77_003900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015367581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine ABC transporter permease GlnP"
                     /protein_id="HCA3359304.1"
                     /translation="MQFDWSAIWPAIPLLLEGAKMTLWISVLGLAGGLVIGLAAGFAR
                     TFGGWFANHIALVFIEIIRGTPIVVQVMFIYFALPMAFNDLRIDPFSAAVVTIMINSG
                     AYIAEITRGAVLSIHKGFREAGLALGLSRRETIRHVILPLALRRMLPPLGNQWIISIK
                     DTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKI
                     L"
     gene            complement(3807..4553)
                     /gene="glnH"
                     /locus_tag="MOX77_003901"
     CDS             complement(3807..4553)
                     /gene="glnH"
                     /locus_tag="MOX77_003901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine ABC transporter substrate-binding
                     protein GlnH"
                     /protein_id="HCA3359305.1"
                     /translation="MKSLLKVSLAALTLAFAVSSHAADKKLVVATDTAFVPFEFKQGD
                     KYVGFDVDLWDAIAKELKLDYTLKPMDFSGIIPALQTKNIDLALAGITITDERKKAID
                     FSDGYYKSGLLVMVKANNNDIKSVKDLDGKVVAVKSGTGSVDYAKANIKTKDLRQFPN
                     IDNAYMELGTNRADAVLHDTPNILYFIKTAGNGQFKAVGESLEAQQYGVAFPKGSDEL
                     REKVNGALKTLRENGTYNEIYKKWFGTEPK"
     gene            complement(5030..5533)
                     /gene="dps"
                     /locus_tag="MOX77_003902"
                     /gene_synonym="pexB"
     CDS             complement(5030..5533)
                     /gene="dps"
                     /locus_tag="MOX77_003902"
                     /gene_synonym="pexB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001730644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein Dps"
                     /protein_id="HCA3359306.1"
                     /translation="MSTAKLVKTKASNLLYTRNDVSESDKKATVELLNRQVIQFIDLS
                     LITKQAHWNMRGANFIAVHEMLDGFRTALTDHLDTMAERAVQLGGVALGTTQVINSKT
                     PLKSYPLDIHNVQDHLKELADRYAVVANDVRKAIGEAKDEDTADIFTAASRDLDKFLW
                     FIESNIE"
     gene            complement(5836..6723)
                     /gene="rhtA"
                     /locus_tag="MOX77_003903"
     CDS             complement(5836..6723)
                     /gene="rhtA"
                     /locus_tag="MOX77_003903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/homoserine exporter RhtA"
                     /protein_id="HCA3359307.1"
                     /translation="MPGSTRKLPVWLPILVLLIAMSSIQSGASLAKSLFPLVGAPGVT
                     ALRLALGTLILIAFFKPWRLRFAKEQRLPLLFYGLSLGGMNYLFYLSIQTVPLGIAVA
                     LEFTGPLAVALFSSRRPVDFIWVVLAVLGLWFLLPLGQDMSHVDLTGAALALGAGACW
                     AVYILTGQRAGAEHGPATVAVGSLITAIIFVPIGAVQAGDALWHWSILPLGLAVAVLS
                     TALPYSLEMIALTRLPTRTFGTLMSMEPVLAAISGMIFLGETLTGIQILALCAIIAAS
                     MGSTLTIRREPQIKQVDVK"
     gene            7078..7593
                     /gene="ompX"
                     /locus_tag="MOX77_003904"
     CDS             7078..7593
                     /gene="ompX"
                     /locus_tag="MOX77_003904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein OmpX"
                     /protein_id="HCA3359308.1"
                     /translation="MKKIACLSALAAVLAFSAGTAVAATSTVTGGYAQSDAQGVANKM
                     SGFNLKYRYEQDDNPLGVIGSFTYTEKDRTNGAGDYNKGQYYGITAGPAYRLNDWASI
                     YGVVGVGYGKFQTTDYPTYKHDTSDYGFSYGAGLQFNPMENVALDFSYEQSRIRSVDV
                     GTWIAGVGYRF"
BASE COUNT         2002 a         1878 c         1962 g         1790 t
ORIGIN      
        1 gcagaacctg atacgtttgc accggcgcgc gaacattggc cagatcaaaa tgctttttca
       61 cctggctatc aagggcaaaa cgcaccgtcc actgcttgag cggtagcgtg gtgaacgaca
      121 cgcgtaaagt aaacgccgtg ttcgttaaac cgacaatacc ggcgaacgtg ggttcgccga
      181 taatcagccc gcgaatatcc tccgtctcca tcagcgccgt taccgcgtct ttcagcgcct
      241 gattcgcttt atccgcatcc tcatggcgat ccacgtcata gttggcgaca acagagccga
      301 taccgcgcac aaagttggcg aaagtggtga tcgaggacca cgggataata tggtatgccc
      361 cggtatcctg ccgcacgccg acggaacgaa tcgacattct ttcgaccgtc cccatcagcg
      421 ggcctatggt gactaagtcg ccggtattca tcccgttttc aaactgaata aaaacgccgg
      481 taataatatc tttcaccagg gtttgcgaac cgaaagagat agccagacct aacgcccccg
      541 cgccagccag caacggcgcg atattgacgc cgatttccga taacacgatc atgatggtta
      601 tggtactgat aatcactgcc agcgcattgc ggaacagcgt cagcagcgtg cgcgtgcggg
      661 cgctgggtag cgggcgacta tgaatatcgg aggccaggcg attctcaatc agactggcga
      721 gaatcgtcca tcccacggcg gagaagaata agattaacgc gatacggatg aggatatcga
      781 ccatcttttc ccccgcgcca taatgtagcc agtgccagaa atcgaatagc ccccaggcgt
      841 tgagcaacag cataacggcg acgcagacgg tcaaaaagcg tgcgactttt agcgccgagg
      901 agagccagcc gttaagccgc ttttgtaatt ccgggtaatt gcgctgcgta tggggcgaca
      961 gggtgatggt tttcgctatc cagcgggtaa acataccgga gataaacgcg gcgatgccaa
     1021 taatcgccag actgcgcacg gtcgcgccca tcataaactt caggctattg cctgggtcga
     1081 ataacgagaa gaaaaacagc acgataaagt aagcgctggc cagccagtgc cacaccagcg
     1141 caaaggcgcg gataaacagg ctaaaaaagg ctaatgatcg ttccgccaga cttaataaat
     1201 gttgcgtaat ctccgctttg tttttaaaga tcaggtacag cgcccagatg gtgatgcaga
     1261 gcatgatcgc cacgttcgcc atcgccccga cctgaacatt cacctggttg gaaataatcg
     1321 gaacggcaac aatcagcccg tagccaatca aactgctaag ggaactcata cggcgattcc
     1381 agtaacgcgc tgtcgcatcc tgaatcgcga atgggcgtaa ttccggtaca ttagggcaaa
     1441 aaataagccg cagaatcgct ttaaagaact ctatcagcgc gaaggcattc aggaacaggc
     1501 tttgctgaaa agcgatagtt cgacttccgg catggaaatt atcactgagc atctgaccga
     1561 taaataaggt gagcgccagt agcagcaggt cgataataaa cgcgccggcg atcatcgccg
     1621 ggagctgtaa ccagttgctg cgttcacggt ttttcttgcg cgcccacagg cccatttttc
     1681 gatataacgg cagggcgcaa agccgtatca cgctataaaa accaaatacc gcgacggcca
     1741 gaaataaaaa gtgggttaac gcgttggtga aggtttgcga gttaaacggc ttgtacggcg
     1801 catcggtgat gttgcgataa agctgggcga aacgggtagc gaaagcatcg ccgtactgac
     1861 gggtaacggt ggtgacgttc tccagtaccg ttttctcatc tttggccgca ggcggggcaa
     1921 gcgctggcgc tggctcggtc ggcggcgtgg ttgaggcttc gcggagttgc gctatcaatt
     1981 cgttacgtga agcctcgttc tccagtacgt cagccagggc cgcataggcc gctttttttt
     2041 gttcaggact gggctctggc gctgcttgct ggctggttga tgtccccgtg gtcacgccgg
     2101 gtatggcgac cgcatgggca ggcgcgccca gtagacaaaa aaggatgaac agggtccacc
     2161 gcatgactcc tccagtgaga aaagagacgc aaaacactaa gtatagatgg cgcaggggag
     2221 ggaaaatgaa atgggactat tccatgatgc ccttcctgcc gcagggcagg aagggcgata
     2281 tctcaggaga cgtgctgtaa aaattcctgt aaacgtgggc ttggcgggtt ttcgatcaac
     2341 gcctgcggac tgccatcttc ggcaatacgg cctttatcga tgaaaatcag ccgtgaggcg
     2401 actttttcgg caaagccgat ttcgtgagtg acaatgacca tggtcatgcc ttcttccgcc
     2461 agatcctgca tgactttcag cacttcatgg cgcagttcag ggtccagagc ggaggttggc
     2521 tcgtcaaaga gcatcatttt cggcttcacg gccagcgctc gggcaatggc gacgcgctgt
     2581 tgttgacctc cggaaagctc ggaggggtag tggtgcgccc gttccgccag tccaactttc
     2641 gctaacagag ctttcgcctg tttttccgct tcttctttct ttacgccgcg cacgcgcaga
     2701 ggaccgaaca tcacgttttc gagcgcggtc agatgcggga acagataaaa ctgttgaaac
     2761 accatgccgg cttcctggcg aatcagccgt tcgtctactt tcggatcgtt gactttcaga
     2821 ccatcgacaa tcagatcgcc ggaggtgatc tcttccagtt tattgataca gcgtaataac
     2881 gtggatttac ccgaaccgga agggccgata atcacaacca cttcgccctg acggatgttt
     2941 aaatcaatgt tatgcagcac ctgggtgggg ccaaagtgct tggagacgtt tttaaattca
     3001 atcacaggat tttcatcctt ctttcaagac gacgcaaaat aaagctcagc accagcgtaa
     3061 tgatcaaata gaagacggcc acggcgctcc agatttccag ggcgcgaaag ttaccggcaa
     3121 taatttcctg gccctgacgg gtcagctcgg ctacgccgat aacaataaac aacgaggtgt
     3181 ctttgatgct aatgatccac tggttgccca gcggcggcag catacggcgc agagcaagcg
     3241 gtaaaataac atggcggatg gtttcccggc gagaaaggcc cagcgccaga cctgcttcgc
     3301 gaaaaccttt gtgaatggat agtactgcgc cacgagtaat ttccgcgata taagcgccgg
     3361 agttaatcat aattgtcacg accgctgcgc tgaacggatc aatacgcaaa tcattaaatg
     3421 ccatcggcag ggcaaagtag ataaacatga cctggacaac gataggcgtg ccgcgaataa
     3481 tttcaatgaa aaccagggcg atgtggttag cgaaccagcc gccaaacgta cgggcaaaac
     3541 ctgccgccag tccaataacc aggccgccag ccagaccgag gaccgagatc cacagggtca
     3601 ttttagcgcc ctcaagcaaa agcggaatgg cgggccagat ggcgctccag tcaaactgca
     3661 tatgtcgttc ctgttaccgt ggtgtaaata gtcaaatgct ctatccggcg cggaaatggc
     3721 gtgaaagtgt cttatccgtc acggaaaaga gctgtaggcc cggtgagcgt cctcactacc
     3781 gggccacaag ccaacatcag gtcgttttat ttaggttctg taccgaacca ttttttgtag
     3841 atttcgttat aggtgccatt ctcacgcagc gttttcagcg cgccgttgac tttctcgcgc
     3901 agttcatcgc tgcctttcgg gaaggcaact ccgtattgct gtgcttccag cgattcgcct
     3961 accgccttga actggccgtt gcctgcggtt ttgataaagt acaggatgtt cggcgtatcg
     4021 tgcagaacgg cgtctgcgcg gttggtgcct aattccatgt acgcgttatc aatgttcggg
     4081 aactgacgca ggtctttggt tttgatattc gctttcgcgt aatccaccga cccggttccg
     4141 ctcttcacgg caacgacttt gccatcgagg tctttaacgc ttttaatatc gttattgttg
     4201 gctttcacca tcacgagcag accgcttttg taatagccat cggaaaagtc gatcgctttt
     4261 ttacgctcgt ccgtaatcgt aatacccgcc agcgccagat cgatattttt ggtttgtaat
     4321 gccggaataa tgccgctgaa atccatcggt ttcagggtgt agtccagctt cagttctttc
     4381 gcgatagcgt cccacagatc aacatcaaaa ccgacgtatt tgtcgccctg tttaaattca
     4441 aacggaacga acgccgtatc ggttgccaca acgagtttct tatccgcagc gtgcgaagac
     4501 accgcaaaag ccagggtaag tgcagccagt gaaactttta atagagactt catagcattt
     4561 ccttttctat ccacggggcg atcccctgcg agaacatgta gcgtaatgaa aaaatcatgc
     4621 caattatgta actcattgtt ttaacagaag cgtcaatcat tcctgtgcac aataagtcgg
     4681 gcaaaaccag tatgctgcac tgttttgggg cactgattta gtgcatgaat aacaaagtag
     4741 agatacaggg tctatttagc gtaaaaattg ttgttaaaac aatctttaat taacgattgt
     4801 gtgatgtaat tattacaaat aattcacttt tatcgaaggg aagtacaaga catgtgcact
     4861 atttaagtgc aaaacccctg tgccaggcag gggtataggg atgacttata tacctgtgta
     4921 catcaagttg caggtgcgtt cgcttcagtg accgacggaa gtcaggctcc tgcggattcg
     4981 ctgcgtttgt accttcctgc aactcgaagt attcagggta gagatagatt tattcgatgt
     5041 tggattcgat aaaccacagg aatttatcga ggtcgcgtga tgcggcggta aagatatcgg
     5101 cagtgtcttc atctttggct tcaccgatag ctttgcgaac atcattagcg acaacagcgt
     5161 agcgatcggc cagttctttt aagtgatcct gcacgttatg gatgtcgagc ggatagcttt
     5221 tcagtggagt tttgctgttg ataacttgcg tggtgcctaa cgccacaccg ccaagctgta
     5281 cggcgcgctc ggccatagta tccagatgat cggtcagtgc ggtacggaag ccatccagca
     5341 tctcatgaac ggcaataaag ttagcaccgc gcatgttcca gtgggcctgt ttcgtgatca
     5401 gcgacaggtc aatgaactgg atcacctgac gattaagcaa ctcaaccgtc gcttttttat
     5461 cgctctctga tacatcgtta cgggtataaa gcagattaga cgcttttgtt tttaccagtt
     5521 tagcggtact cataatctca tatcctcttg atgtttgtgt cccaggtaat taacgaaaat
     5581 aagtatagca ccggttttta acttcgcttt tttgaattta cctatcactt taatagtaca
     5641 gacaagattt aatatttatt ttggttatga atcaattggt tagatgagtt tgttgtttga
     5701 tgggtaataa ttctcatttt aatgtaaaaa atgagaaaaa atatgacaaa aaatgacgaa
     5761 gtaatagcgc gataataaaa ggtgaataac gaggtgatat tctgcatgat tatgcacatc
     5821 atgcagaata agaaactatt ttacgtcaac ttgtttaatt tgcggttcgc ggcgaatcgt
     5881 tagggtagaa cccattgagg cggcaatgat ggcgcacagg gccaggattt gtatgcccgt
     5941 aagcgtttcg cccagaaaaa tcatcccgga aatggcggcc agcacgggtt ccatgctcat
     6001 cagcgtaccg aaggtgcgag ttggcaggcg cgtcagcgca atcatttcca gtgaataagg
     6061 cagcgccgta gaaagcacag cgaccgctaa ccctaaggga agaatcgacc agtgccatag
     6121 cgcatcgcca gcctgaactg cgccaatcgg cacgaaaatg atggcggtaa tcagcgagcc
     6181 taccgccacc gtggccggac catgttccgc gcctgctcgc tggccggtaa gaatatagac
     6241 agcccaacag gcgccagcgc cgagcgctaa cgcggccccg gtaagatcga cgtgagacat
     6301 atcttgtcct aatggcagca ggaaccagag tccaagcaca gccagtacga cccaaataaa
     6361 atctaccgga cgccgggatg aaaacagcgc gaccgccaga gggccggtaa attccagcgc
     6421 gaccgcaata cccaacggca ccgtctgaat cgacagatag aatagatagt tcatcccgcc
     6481 cagcgacaga ccataaaaca gtaaaggcag ccgctgctct ttggcaaaac gcaaacgcca
     6541 gggtttgaaa aaggcgataa ggataagcgt tcccaacgcc agacgaagcg ccgttacacc
     6601 cggcgcgcca acaagaggaa ataacgattt tgccagtgaa gcgccactct gaatagagga
     6661 catggcaatg agcaaaacca aaatgggcaa ccagactggt agtttacgtg ttgaccccgg
     6721 catcctttct cctgtcaaaa aatgtcagta cgagtaaagg tggcagtgta atggaaattc
     6781 cccggagcgg ttgaggattc gttgaaaaaa aaatttccag gattccataa aatgaactta
     6841 aattgatgga taaatagact gttagtttag gaataatctg gatgaatgta tcgcgccaca
     6901 cgcgcattat tggtgcaatc agccggaaaa atgatgttaa ttgaataaga tagcgcgtta
     6961 tggaaacgtt ctgttacatg aaaggcgccc ttagacaccg tgaatcgcaa agagtttccc
     7021 attaattttt gatatattta aaacttagga cttacttgaa gcacatttga ggtggttatg
     7081 aaaaaaattg catgtctttc agcactggcc gctgttctgg ctttttccgc aggtactgca
     7141 gtagctgcta cttctactgt taccggtggt tacgctcaga gcgacgcgca gggcgtagcg
     7201 aataaaatga gcggtttcaa cctgaagtat cgttacgagc aggacgacaa cccgctgggt
     7261 gtaatcggtt ccttcaccta caccgaaaaa gatcgtacta acggtgcggg cgattacaat
     7321 aaaggtcagt actacggcat cactgccggc ccggcttacc gtctgaacga ttgggcgagc
     7381 atctacggtg tagtcggtgt gggttacggt aaattccaga cgaccgatta cccaacctac
     7441 aaacatgaca ccagcgatta tggcttctcc tatggcgctg gtctgcaatt caacccgatg
     7501 gaaaatgttg ctctggactt ctcttacgag cagagccgta ttcgtagcgt tgacgttggc
     7561 acctggattg ctggcgtagg ttaccgcttc taatcacgtc ggtgaaaatg aaaaatccgc
     7621 ctttcggggc gg
//
LOCUS       DAGWFR010000181         7557 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.183, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000181 DAGWFR010000000
VERSION     DAGWFR010000181.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 7557)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7557)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7557
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.183"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            267..5223
                     /locus_tag="MOX77_003905"
                     /pseudo
     CDS             267..5223
                     /locus_tag="MOX77_003905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010835061.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
     gene            complement(5385..6734)
                     /gene="xseA"
                     /locus_tag="MOX77_003906"
     CDS             complement(5385..6734)
                     /gene="xseA"
                     /locus_tag="MOX77_003906"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HCA3359309.1"
                     /translation="MLSSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFTQPAS
                     GHWYFTLKDDTAQVRCAMFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIAESM
                     QPAGEGLLQQKYEQLKAKLHAEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVL
                     KRRDPSLPVIIYPTAVQGDDAPGQIVRAIELANTRGECDVLIVGRGGGSLEDLWSFND
                     ERVARAIFASRIPVVSAVGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQS
                     AQQRLGMAMDYYLANRSRRFTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEARI
                     KQATQRQQRVSQRLSQQNPQPRIHRVQSRIQQLEYRLTENIRSRLSEQRERFGNAVTH
                     LEAVSPLATLARGYTVSTTTDGKVLKKIKQVKAGDIMTTRLEDGWLESEVKSVTPGT"
     gene            6895..>7557
                     /locus_tag="MOX77_003907"
     CDS             6895..>7557
                     /locus_tag="MOX77_003907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004151980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HCA3359310.1"
                     /translation="MLRIAKEALTFDDVLLVPAHSTVLPNTADLSTQLTKTIRLNIPM
                     LSAAMDTVTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVVTDPQTVLP
                     TTTLHEVKALTERNGFAGYPVVTEDNELVGIITGRDVRFVTDLNQPVSVYMTPKERLV
                     TVREGEAREVVLAKMHEKRVEKALVVDDNFHLLGMITVKDFQKAERKPNSCKDEQGRL
                     RVG"
BASE COUNT         1836 a         2022 c         2124 g         1575 t
ORIGIN      
        1 attcataata taaatattta ttaaatagat aaatatattc atattaatta taaattaacc
       61 agaagctgac ctggtattga aataaggctt gaaattagtt aataatttgt ctttgataat
      121 acattgttac agatgacagc aaccattcat agaatcatat ttttgttatt tattatttaa
      181 ctcatttata tacaccattt aaaagctatt tgcagccaat caaatcaagt ttgcttcgtg
      241 aatgttatta aaaggaaatt taaaaattga acaggaccta cagtatcgtc tggagcgccg
      301 tgcgaaatat gtatgtcgta gcttcagaac tggcgcgaag ccacagcaaa gttaaaatac
      361 aggcgcacgc taatgaagtc gccccttcta ttaaaaagcc tgattcagga tgggcaagac
      421 accatgcgct ggccctggca attgttgccg cgcttggctt tgccagcccg ctggccatcg
      481 ccgataatcc ggtgtcatac accgatgggg tcaagcacga cctgagcgac gattcgccga
      541 tttcctactc aggcactggt gaaggttctg cactgcacct cgaaggcctt gcaacgcccg
      601 aagggggctg gcaggcaacg tcgggtacag gtacaaatgt cgtgattaac accaacggcg
      661 gcggcgatcc tgttcaggga actcatgcta tcgccacggc agttaccctc aacaagggcg
      721 caacacttga cctgaccggg gcgcagatct ctacggaagg aacctacacg gcaggtatcg
      781 acctccaggc gcaaagcagc atgacgctga atggcgggag catccagatc ggaagtaatt
      841 acggcatcct gaccctctct ggcgagtcat gggctgccct gattggcacc gacgttacgg
      901 caacgacgca aagccgtagc agcatagtgt cacaatcagg tagcacgctt aacattaagg
      961 acgggagcgt aattacgctg acaaacggcc aggtgcgcgt agtaggcgag acgacataca
     1021 actcctggct gaatgtgtcc gatagcacga tgagctccac gggtacggat agtacgcttc
     1081 ttgtgtccaa caagggcgtt cttgatatta cgaactctac cgtcacgcac gataatgcca
     1141 caggcgccgc tattgaggtg aaaaacgcct caacggtgag catctctgat gataaagatt
     1201 cgatggccat caactccaaa ggcatcggta ttaaaatcct cgcctccagc gtggatatta
     1261 acggcgccac catcaacgcc gacggcgacg gcatctttat aacaagcaaa ggtaaaagcg
     1321 gtgggtatga tgatatcaac gcgctgacgg ttaacaaagc acaggttaat tcagagacga
     1381 ttgcgctgca tgtggactct ggcacgacga ttaacgatcc tatcgtgcta accgatagcg
     1441 catttgacgc gccggcagtg atcaagctgg gcagcaaggc ggtcattcag gccgacaata
     1501 cgacattgaa cggtgacgtt gttcagagtg acatgtcatc gtcatcgctg tctttaagcc
     1561 agggttccac gttaaccggt agtgtagatg cgatgtttac tacactgtcg ctcgacgata
     1621 ctagccagtg gaatatgacc gactcgtcaa tcatcggcaa cctgaccaac aacggcgaca
     1681 ttacgctgaa caacgagagc ggttcgacag gcacgctgct gacggtgggc aataccctga
     1741 ccttgcagga cggcagccag ataaacgcga cgctggatac cgccaacagc tcgccaatta
     1801 tcaaagccgc caacgtgacg ctggatggga cactgaacct tagctcagcg gccacctttg
     1861 tcgcgcccga aaccgacgag cagttaggat cgttcacgct aattgattcg caaaccgcga
     1921 ttactaccga ttttgacagc gtaacgctgg atgccgacac ctctgctatg ccggattacc
     1981 tgacgatcaa cgcgggcgtt gatgcgaatg ataataccaa ctacgtgttg tctacgggcc
     2041 tgagctggta cgcggacgca aaatctgcgc gcgttgcgca cggcaccttt accgttgacg
     2101 caggcgatac ctttaccgtc accagcgaac tggatgaaac cgcggccacc tccaactggg
     2161 acggtaaaac gctgttcaaa gaaggcgacg gtacgctcgt cctcagcaac acggcgaacg
     2221 acttcggcaa taccgacatt aacggcggta cgctgtctgc gaatgatgcc gccgcgctcg
     2281 gcagcggcga cgtggccatt gcagaaaacg caaagcttga gttgagccaa ggcacgctgg
     2341 ataacaacgt gaccggcgag ggccaaattg tcaaaagcgg tagcgatgag ctgatcgtga
     2401 ccggcgataa caactacagc ggcggtacca ctatttccga cggcacgctg attgctgacc
     2461 atgcagattc gctgggtacc ggggctgttg ccaacagcgg cgtgcttcag gtcggcgaag
     2521 gcgagctgga aaatacgctt tccggcaacg gttcgctgat gaaaaccggt acgggcgagc
     2581 tgacgttaag cggcgacaac acttactccg gcggcaccac tatttccggc ggtacgctga
     2641 ttgccgccaa cgttaacgcg ctgggcggcg gtgatgtcga taacgcgagt acgctgaagc
     2701 tggacgcgga gggcgaattc aaccttgcga atgtcacgac ccagtctgga gcaacgactg
     2761 agctgtccaa aggtacgacg ctcaacgtcg actcgctgac tcagcaagcc gatagtacgc
     2821 tgaatattga cctcagtaag actaatggtg aaagcgccat taccgctgac agcgtctcgt
     2881 tggctggtgc gctcaacatt accgggatcg gcaacgtcac agacagctgg acgcctgagg
     2941 catacaccta cacgctgatt gacagcgaca gcgccattac gaccgatttc aatgatttga
     3001 ccgtcgcggg aatgaatagc gaagatgttg acttcctgac catcgacgga aaagtcgacg
     3061 aagcagatag cacaaactat gatctgacgg cctccctctc ctggtatgcg gacagagaca
     3121 acgcttctac cgacgcccac ggcaccttta cgctaagtga ccctgacggc agctttaacg
     3181 ttgcggctaa actgacagat gttgatgacg cgctggatcc gggcagcaca tgggacggta
     3241 agtcgctgac caaagaaggc gcaggcacgc tgatcctctc cggcgacaac gactacagcg
     3301 gcggcactac aatcaatgaa ggtacgctgg tcgccgccag cacgacggcg ctgggcaccg
     3361 gtctggtgga caataacgcc acgctggtac tggacgcaga cggtgaagtc agcgcggtgg
     3421 gcggcatcac cactcatggc ggcgcgacga cccaactggc gctcggcacc tcgttggatc
     3481 tcggcgacag cgcgttaatt caggaagatg gcagtacgct gaacgttgag ctgaatagtg
     3541 actcagcgca accgctgatt accggtggca gcgccacgct tggcggtgat ttggtcgtca
     3601 gcgacgccag cctacaagcg cgcgcctccg acgcggagtt ccagtccttt aaactgatgg
     3661 atatggacag cgatatcagc ggcgacttta ccagcctgac gatgaacctc accgacaagc
     3721 cggactatct gaccgtaacc ggaacaatca atcctcaaga ccagtctgaa tacctgctta
     3781 ccgaagggct gagctggaat gcgaccgcca cgtcagcgac gccagcacac ggcaccttca
     3841 ctctgggcgc aggcgatagc tttgaagtca ccagcgtact gggcgataaa accggcaacg
     3901 gcggctcgct ttacctgaat accgtcctgg gcgacgatga ttcggcgacc gataagttgg
     3961 tcattaccgg cgatgcctcc ggcaccaccg atctgtacat caacggcatc ggcgatgggg
     4021 cgcagaccac taacggtatc gaagtggtgg atgttggcgg cgtatcgacc agcgatgcgt
     4081 ttgtgttaaa aaatgaggta aacgccagtc tgtataccta ccgtctgtac tggaatgaaa
     4141 gtgacaacga ctggtatctg gcgtcaaaag cacagtctga tgatgacgac agcggtggcg
     4201 atgtcacgcc ttcggacgac ggcggcgacg gtggcgatgt cacgcctccg gacgacggcg
     4261 gcgatgtcgc accacagtac cgtgcggata tcggcgcgta catgggcaac cagtggatgg
     4321 cgcgcaacct gcaaatgcag acagaccctc tatgaccgcg agggcagcca gtatcgtaac
     4381 gctgatggca gcgtctgggc acgcttcaaa gcgggtaaag cggaatcaga ggctgtcagc
     4441 ggtaatatcg atatggacag caactactct cagttccagc taggcggcga cattctggct
     4501 tggggtaacg gccaacagag cattaccgtt ggcgtcatag cgagctacat caacgccgat
     4561 accgacagca ccggtaaccg tggcgcagac ggtagccagt tcaccagcag cgccaacgta
     4621 gacggctaca accttggcgt ctatgccacc tggtttgccg atgcccaaac gcatagcggc
     4681 gcgtatgtcg acagctggta ccaatatggt ttctacaaca acagcgtaga gagcggtgat
     4741 gcgggatctg aatcttatga ttcaaccgct aatgctgtct cgctggaaac cggttatcgc
     4801 tacgatattg cgcttagcaa cggtaatact gtcagtctga cgccgcaggc gcaggttgtc
     4861 tggcagaact actcagcgga tagcgtgaag gataactacg gcacccggat cgacggtcag
     4921 gatggcgaca gttggacaac gcgcctgggt ctgcgtgttg acggcaagct gtacaaaggc
     4981 agccgtacgg ttatccagcc gtttgctgaa gccaactggc tgcacaccag cgatgatgtg
     5041 tcggtatcgt ttgatgatgc cacggtgaaa caggatcttc cggctaaccg tgcggagctg
     5101 aaagtgggtc tgcaggcaga tatcgataag cagtggagcg ttcgcgctca ggttgccggg
     5161 cagactggca gcaatgactt tggcgatctg aacggtagcc tcaatctgcg ctataactgg
     5221 taagttagac aaaaccgggc gggtattccc tgcccggttt tgaggcgaat gacaaaccgg
     5281 ttgagcgtcg gattgtggct acaccttatc cgacgtggcg cgtgggttgg ctgaggtgaa
     5341 gtcgaaaccc aacatcgcgc tgcaaaaggt gggggagtgt tggattacgt tcccggcgtg
     5401 acggatttga cttcactttc aagccagccg tcctccagcc gcgtggtcat gatatcgcct
     5461 gctttgacct gtttgatctt tttcaacacc ttgccgtccg ttgtcgtcga aaccgtatag
     5521 ccgcgcgcca gcgtggctaa cgggctgacc gcttccagat gcgtgaccgc gttgccaaaa
     5581 cgctcgcgct gttcgcttaa ccgtgagcgg atattctccg tcagacgata ttccagctgt
     5641 tggatgcgcg actgcacgcg gtgaatgcgc ggctgcggat tttgctggct caggcgttga
     5701 cttacgcgtt gctgacgctg agtggcctgc ttaatcctgg cctcaagcgc aaatcccatc
     5761 cgttggcgta gacgttccag cgcggtttgc tgacgggcca gacgtagttg cggatgttgt
     5821 tgttgcagac ggtgaaaaat ctgcgtgaaa cgacggctgc ggttggcgag gtagtagtcc
     5881 atcgccatgc ccagacgctg ctgggcggac tggatctgac gcaacaactc ctgctggtta
     5941 cggctgacaa tttctgccgc tgctgatggc gtcggcgcgc gcaggtcggc gacaaaatcg
     6001 gcgatagtga cgtcggtttc gtgaccgacg gcgctgacca ccggaatacg gctggcaaaa
     6061 atagcccgcg ccacgcgttc gtcgttaaaa ctccacaaat cttccagcga accgccgccg
     6121 cgtccgacga tcagcacgtc gcactcgccg cgcgtgtttg ccagttcgat agcacgaacg
     6181 atctgccccg gcgcatcgtc gccctgtacc gcggttggat agataataac gggcagggat
     6241 gggtcacgac gcttcaacac gtggaggata tcgtgcagcg ccgcgccggt tttcgaggtg
     6301 atcaccccaa cgcagtgggc cggggagggc aacggctgtt tatgctgctg atcgaacaag
     6361 ccttcggcat ggagtttggc ttttagctgc tcatacttct gctgcaacaa gccttcgcca
     6421 gccggctgca tactttcggc gatgatttga taatcgccgc gcggctcgta cagcgtaatg
     6481 ttggcgcgta ccagcacctg ctgcccgtgc tgcgggcgga acgtcacccg gcggttgctg
     6541 ttgcggaaca tcgcacagcg cacctgagcg gtatcgtctt tgagcgtaaa gtaccagtgg
     6601 cccgacgcag gctgcgtgaa attagaaatc tcgccgctga tccatacctg tcccatctcc
     6661 tgttctaaca gcagacgaac cgtctggtta aggcggctta cggtaaaaat tgaggaagtt
     6721 tgagaggata acatgtgagc gggatcaaat tctaaatcag caggttattc aatcgatagt
     6781 aacctgctca cgggggatcg caagcactat ttgcaaaaaa atgtagatgc aaccgattac
     6841 gttctgtata atgccgcggc aatatttatt aacctcccag gtgagatatt gcccatgcta
     6901 cgtatcgcta aagaagccct gacgtttgac gacgtcctcc ttgttcccgc tcactccacc
     6961 gttttgccga atactgctga tctcagcacg cagttgacga aaactattcg tctgaatatt
     7021 cctatgcttt ctgcggcgat ggacaccgtg acggaagcgc gcctggcaat tgccctggcc
     7081 caggaaggcg gcatcggttt tatccacaaa aacatgtcta ttgagcgcca ggcggaagaa
     7141 gttcgccgcg tgaagaaaca cgagtccggc gtagtgaccg acccgcagac cgtcctgcca
     7201 accaccacgt tgcatgaagt gaaagccctg accgagcgta acggttttgc gggctatccg
     7261 gtggtgactg aagataacga gctggtgggt atcatcaccg gtcgtgacgt gcgttttgtg
     7321 actgacctga accagccggt gagtgtttac atgacgccga aagagcgtct ggtgaccgtt
     7381 cgtgaaggcg aagcccgtga agtcgtgctg gcaaaaatgc acgaaaaacg cgtagaaaaa
     7441 gcgctggtcg ttgatgataa cttccatctg cttggcatga ttaccgtaaa agatttccag
     7501 aaagcggaac gtaaaccaaa ctcctgtaaa gatgagcagg gccgtttacg tgtcggc
//
LOCUS       DAGWFR010000182         7480 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.184, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000182 DAGWFR010000000
VERSION     DAGWFR010000182.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 7480)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7480)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7480
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.184"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..720
                     /locus_tag="MOX77_003908"
     CDS             <1..720
                     /locus_tag="MOX77_003908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HCA3359311.1"
                     /translation="LLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFTQYDIKRL
                     IAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERLHTRDMR
                     MMGGLWGKMKWLPALSMFFAVATLGMPGTGNFVGEFMILFGSYQVVPMITVISTFGLV
                     FASVYSLAMLHRAYFGKAKSQIASQELLGMSLRELFIILLLVVLLVLLGFYPQPILDT
                     SHSAMSNIQQWFVNSVTTTRP"
     gene            727..2184
                     /gene="nuoN"
                     /locus_tag="MOX77_003909"
     CDS             727..2184
                     /gene="nuoN"
                     /locus_tag="MOX77_003909"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416779.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoN"
                     /protein_id="HCA3359312.1"
                     /translation="MTITPQHLIALLPLLIVGLTVVVVMLSIAWRRNHFLNATLSVIG
                     LNAALVSLWFVGQAGAMDVTPLMRVDGFAMLYTGLVLLASLATCTFAYPWLEGYNDNQ
                     EEFYLLVLIASLGGILLANANHLAALFLGIELISLPLFGLIGYAFRQKRSLEASIKYT
                     ILSAAASSFLLFGMALVYAQSGNLSFEALGKSLGDGMLHEPLLLAGFGLMIVGLGFKL
                     SLVPFHLWTPDVYQGAPAPVSTFLATASKIAIFGVVMRLFLYAPVGDSEAVRVVLGII
                     AFASIIFGNLMALSQTNIKRLLGYSSISHLGYLLVALIALQSGEMSMEAVGVYLAGYL
                     FSSLGAFGVVSLMSSPFRGPDADSLYSYRGLFWHRPVLAAVMTVMMLSLAGIPMTLGF
                     IGKFYVLAVGVQASLWWLVAAVVVGSAIGLYYYLRVAVSLYLHAPQQPGRDAPTNWQY
                     SAGGIVVLISALLVLVLGVWPQPLISLVQLATPLM"
     gene            complement(2325..3329)
                     /locus_tag="MOX77_003910"
     CDS             complement(2325..3329)
                     /locus_tag="MOX77_003910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012131502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheV"
                     /protein_id="HCA3359313.1"
                     /translation="MDNFQKDIDDRANLTLSNRFELLLFRLGTSLHEQKSELFGINVF
                     KLREIIPMPAFTRPAGMKAPLLGMVNIRDQVIPVIDLPAVAGCKPETGLNILLITEYV
                     RSVQAFAVESVENIMRLDWQQVHTAEKAVNGRYITSIACLDDNKETNNLALVLDVEQI
                     LYDIVPSSHDLRATNLKTNKFYITPGAVAIVAEDSKVACAMLEKGLNAMEIPHQMHVT
                     GKDAWERIQQLAQEAEAEGKPISEKIALVLTDLEMPEMDGFTLTRKIKTDERLKKIPV
                     VIHSSLSGSANEDHVRKVKADGYVAKFEINELSSVIQEVMERAAQNISGPLVSRQLLS
                     "
     gene            complement(3395..4312)
                     /gene="rbn"
                     /locus_tag="MOX77_003911"
     CDS             complement(3395..4312)
                     /gene="rbn"
                     /locus_tag="MOX77_003911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease BN"
                     /protein_id="HCA3359314.1"
                     /translation="MELIFLGTSAGVPTRSRNVTAILLHLQHPTQPGVWLFDCGEGTQ
                     HQMLNTAFHPGKLERIFISHLHGDHLFGLPGLLCSRSMAGNPHPLTVYGPQGVREFIA
                     TTLRLSGSWTDFPLQIEEISAGDILDDGLRKVTAFRLEHPLECYGYRVVEHDKPGALN
                     ARALKAAGVTPGPLFQALKAGKTVTLADGRQINGADYLAPAVAGKSVAIFGDTAPCEA
                     ALALAQGVDVMVHETTLDASMEEKANARGHSSTRQTATLAREAAVGRLIMTHISSRYD
                     DKGCQRLLAECRAIFPATELAYDFSVFPV"
     gene            4373..4834
                     /locus_tag="MOX77_003912"
     CDS             4373..4834
                     /locus_tag="MOX77_003912"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HCA3359315.1"
                     /translation="MIDWQDLHHSELTVPQLYALLKLRCAVFVVEQRCPYLDVDGDDL
                     VGDNRHILGWHQDELVAYARILKSDNESDPVVIGRVIVSDAWRGAKLGQQLMAKTLES
                     CGRHWPDKPLYLGAQAHLQPFYARFGFIPVTDVYDEDGIPHRGMAREVHQA"
     gene            4889..5194
                     /gene="elaB"
                     /locus_tag="MOX77_003913"
     CDS             4889..5194
                     /gene="elaB"
                     /locus_tag="MOX77_003913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response protein ElaB"
                     /protein_id="HCA3359316.1"
                     /translation="MSYQFGESRVDDDLTLLSETLEEVLRSSGDPADQKYIELKARAE
                     QALEEVKNRVSHASDSYYYRAKQAVYKADDYVHEKPWQGIGVGAAVGLVLGLLLARR"
     gene            5295..6590
                     /gene="menF"
                     /locus_tag="MOX77_003914"
     CDS             5295..6590
                     /gene="menF"
                     /locus_tag="MOX77_003914"
                     /EC_number="5.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismate synthase MenF"
                     /protein_id="HCA3359317.1"
                     /translation="MHSITTALENLTRQLSQEIPATPGLCVFDAPFPLNDAFDALSWL
                     ASQSSFPQFYWQQRNGDEEAAVLGAITVFSSLDLAQRFLRQHAQPDLRIWGLNAFEPK
                     EGYLLLPRLEWRRSGGTATLRLHLHSDVSLRDDARLAKAFLASLVGIKPVPALRLSLT
                     SEQHWPDKDGWVKLIQQATHTIAQEAFDKVVLARATDLQFSRPVNAAAMMASSRRLNL
                     NCYHFFMAFSADTAFLGSSPERLWRRRETALRTEALAGTVANHPDNHKAWQLGEWLMK
                     DDKNQRENMLVVEDICQRLQNCTHSLDVLPPQVLRLRKVQHLRRCIWTALNQADDTLC
                     LHQLQPTAAVAGIPREPARCFIEQHEPFEREWYAGSAGYLSTRQSEFCVTLRSAKVTA
                     NVVRLYAGAGIVRGSDPEQEWQEIDNKAAGLRTLLQMDA"
     gene            6676..>7480
                     /gene="menD"
                     /locus_tag="MOX77_003915"
     CDS             6676..>7480
                     /gene="menD"
                     /locus_tag="MOX77_003915"
                     /EC_number="2.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-succinyl-5-enolpyruvyl-6-hydroxy-3-
                     cyclohexene-1-carboxylic-acid synthase"
                     /protein_id="HCA3359318.1"
                     /translation="MSVSAFNRRWAAVILEALTRHGVRHVCIAPGSRSTPLTLAAAEN
                     PAFIHHTHFDERGLGHLALGLAKVSQQPVAVIVTSGTAVANLYPALIEAGLTGEKLIL
                     LTADRPPELIDCGANQAIRQAGMFASHPSQTLSLPRPTQDIPARWLVSTIDNALAMLH
                     AGALHINCPFAEPLYGDMNDTGLVWQQRLGDWWQDEKPWLREARRLASDKQRDWFFWR
                     QKRGVVVAGRMSAEEGKKVAQWAQTLGWPLIGDVLSQTGQPLPCADLWLG"
BASE COUNT         1507 a         2039 c         2125 g         1809 t
ORIGIN      
        1 ctgctgcgtt tctccctgcc attgttcccg aacgcgtcgg cggagtttgc gcccatcgcc
       61 atgtggctgg gcgtcatcgg cattttctac ggcgcgtgga tggcctttac ccaatacgac
      121 atcaagcgcc tgattgccta tacctccgtt tcccacatgg gcttcgtgct gatcgctatc
      181 tacaccggca gtcagctggc gtaccagggc gcggtgattc agatgattgc acacggtttg
      241 tccgcagccg gtctgttcat tctgtgtggc cagttgtacg aacgtctgca tacgcgtgac
      301 atgcgtatga tgggcggcct gtggggcaag atgaagtggt tgcctgcgct gtccatgttc
      361 tttgcggtgg cgacgctcgg tatgccgggc accggtaact ttgtcggcga atttatgatt
      421 ctgttcggca gctaccaggt ggtgccgatg attaccgtta tctcgacctt tgggctggta
      481 ttcgcctctg tatactcgct ggcgatgctg catcgcgctt actttggtaa agcgaagagc
      541 cagattgcca gccaggaact gctagggatg tcgctgcgcg agctgtttat cattctgttg
      601 ctggtggtgc ttctggtact gcttggcttc tatccgcagc cgattctgga tacctcgcat
      661 tctgcgatga gcaacatcca gcagtggttt gttaattccg ttactactac aaggccgtaa
      721 atcgccatga caataactcc acaacacctg attgcgctgc taccgctgct gatcgtcggc
      781 ttgacggtgg tggttgtgat gctctccatt gcgtggcgac gcaatcactt cctcaatgcc
      841 acgctgtcgg tcattgggct taacgctgct ctggtttcgc tttggtttgt cggccaggcc
      901 ggggcaatgg acgtcacgcc gctgatgcgc gttgacggct ttgcgatgct ctacaccggg
      961 ctggtgctgc tggcgagcct cgccacctgt acttttgcct acccgtggct ggaaggctat
     1021 aacgataacc aggaagagtt ctacctgctg gtgttaatcg ccagcctggg gggaattctg
     1081 ctggcgaacg ccaaccatct ggcggcgctg ttcctcggta ttgaactgat ctcactgccg
     1141 ctgttcggcc tgattggtta tgctttccgc cagaaacgct cgctggaagc cagtatcaaa
     1201 tacaccatcc tctccgccgc cgcctcgtct ttcctgctgt tcgggatggc gctggtctat
     1261 gcgcagtccg gcaacctgtc tttcgaagcg ctcggtaaga gcctcggcga tggtatgctg
     1321 cacgagccgt tgctgctggc gggctttggc ctgatgattg tcggtctggg ctttaaactc
     1381 tctctggtgc cgttccacct gtggacgcca gacgtttacc agggcgcgcc tgcgccggtt
     1441 tctaccttcc tggcgacggc gagcaaaatc gctatcttcg gcgtggtaat gcgtctgttc
     1501 ctgtatgcgc cggtaggcga cagcgaagcg gtacgcgtgg tgctgggcat tatcgccttt
     1561 gcctctatca tcttcggtaa cctgatggcg ctgagccaga ccaacatcaa acgtctgctc
     1621 ggttactctt ctatctctca cctcggctat ctgctggtgg cgctgattgc cctgcagagc
     1681 ggcgagatgt cgatggaagc ggtaggcgtt tatctggccg gttatctgtt cagcagcctc
     1741 ggcgcgtttg gcgtggtcag cctgatgtcc agcccgttcc gcggcccgga tgccgactcc
     1801 ctgtactctt accgtggtct gttctggcac cgtccggttc ttgccgcggt gatgacggtg
     1861 atgatgctgt cgctggcagg tatcccaatg acgctgggct ttatcggcaa attctacgtg
     1921 ctggcggtcg gcgttcaggc cagcctgtgg tggctggtcg ccgccgtggt ggtgggttcc
     1981 gcgattggtt tgtactacta cctgcgcgtt gcggtgagtc tctacctgca cgcgccgcag
     2041 caaccgggac gcgacgcgcc gacaaactgg cagtacagcg caggcggtat cgtggtgctg
     2101 atctccgcgt tgctggtgtt ggtactgggc gtctggccgc agccgctgat tagccttgtg
     2161 cagttagcga cgccgttgat gtaagcaata agtaaaaacg aaaaacccgc ttcacgaagc
     2221 gggtttttta ttacctgatg tcattcttta aaatgactca ggacggtaga ccggataagg
     2281 cgcttgcgcc gccatccggc ctgtaaggtc tcagcgaccg gaatttaact tagcaactgc
     2341 cggcttacca gcgggccgct gatgttttgc gccgcgcgtt ccatcacttc ctgtatcact
     2401 gaagagagtt cgttaatctc aaacttggcc acgtagccgt cggctttcac cttacgcaca
     2461 tgatcttcgt tggcgctgcc ggaaagggaa gagtgaataa caaccgggat ctttttcagc
     2521 cgttcatcgg ttttaatttt acgcgttaac gtaaagccat ccatctccgg catctcaagg
     2581 tctgtcagga ctagcgcgat tttctcgcta attggcttac cttcggcctc cgcttcctgc
     2641 gccagttgct ggattctctc ccaggcatcc ttgccggtca catgcatctg atgcggaatt
     2701 tccatcgcgt tcagcccttt ttccagcatc gcgcaggcga ctttggagtc ttccgccaca
     2761 atggcaaccg cgccgggggt aatataaaat ttattggtct tcagattggt ggcgcgcaga
     2821 tcgtggctgg aggggacaat atcataaagg atctgctcaa cgtcgagcac cagcgccagg
     2881 ttgttggttt ctttgttgtc atccaggcag gcaatactgg tgatgtagcg accgttgacg
     2941 gctttctcgg cggtatgcac ctgttgccag tcaagacgca taatattttc caccgactcg
     3001 acggcaaatg cctgtacgct gcgcacatat tcggtgatca gcaaaatatt cagcccggtt
     3061 tccggcttgc agcccgctac cgctggcaaa tcaatcaccg gaatgacctg atcccgaata
     3121 ttgaccatgc ccaatagcgg cgctttcatg cctgccgggc gcgtaaaggc gggcataggt
     3181 atgatttcgc gcagcttaaa tacattgata ccgaacagct ctgacttctg ttcatgcagc
     3241 gatgtaccaa gacggaataa cagcagttca aaacggttgg acagggttaa attggccctg
     3301 tcatcaatat ctttctgaaa attgtccatc ctaacctcat tatgaaagcc tgcctttttt
     3361 agtgttatcg gcaatgagga caaaaaatgg agcgctaaac cgggaaaaca gaaaaatcgt
     3421 aagccagctc cgtcgccggg aaaatagcgc ggcattccgc cagtaagcgc tgacagcctt
     3481 tatcgtcata gcgtgagcta atgtgggtca tgatcagccg accaacggca gcctcccgcg
     3541 ccagcgtcgc ggtttgacgg gtggagctgt gtccgcgagc gttggctttc tcctccattg
     3601 acgcatccag cgtggtttca tgaaccatca catccacacc ctgcgccagt gcgagggcgg
     3661 cctcgcaggg cgcggtatcg ccgaaaatcg ccactgattt cccggccacg gcgggagcaa
     3721 ggtagtcggc gccattgatc tgccttccat cggcaagcgt gacggttttt cctgccttca
     3781 acgcctgaaa cagcgggccg ggcgtaacgc ctgcggcttt taacgccctg gcattcagcg
     3841 cgccaggctt gtcatgttca acaacgcgat atccgtagca ctccagtgga tgctccagcc
     3901 tgaatgcggt cactttacgc agaccgtcgt caagaatatc gccagcgcta atttcttcaa
     3961 tttgcaacgg aaaatcggtc catgaaccgc taaggcgcag tgtggttgca ataaactcac
     4021 gcacgccttg aggcccgtat acggttagcg gatggggatt ccccgccatc gaccggctgc
     4081 atagcagacc cggcaggcca aacagatgat cgccgtgaag atggctgata aaaatgcgct
     4141 caagcttacc gggatgaaac gcggtattaa gcatttgatg ctgtgtccct tcgccgcaat
     4201 caaaaagcca tactcccggc tgcgttggat gttgcagatg taataaaatt gccgttacat
     4261 tgcgtgagcg tgtgggaacg cctgcggacg tacctaaaaa aattaattcc atcttgtcca
     4321 tacgcgtttg gttatcgttt aacccaagat taccacaaca caggagcgca tcatgattga
     4381 ctggcaggat ctccaccata gcgaacttac tgttcctcaa ctttacgcgt tactcaaatt
     4441 gcgctgcgcg gtctttgtgg tagaacagcg ctgtccttac ctggatgtgg atggcgatga
     4501 tttagtcggc gacaatcggc atattctggg ctggcatcag gatgagctgg tggcgtatgc
     4561 gaggattctg aaaagtgata acgaatcaga cccggttgtc attggccggg tgatcgtcag
     4621 cgatgcctgg cgaggggcga aactgggcca gcaattaatg gcgaaaacgc tggaatcttg
     4681 tgggcggcac tggccggata agccgctata tctgggggcg caggcgcatc tgcaaccttt
     4741 ttatgcgcgg tttggtttta ttcccgtcac cgatgtttat gacgaagacg gcattccgca
     4801 ccggggaatg gcgcgggagg ttcatcaggc ataaaccgaa accgttgact atagttagga
     4861 gcaggtgtta acacaacgga gaatgagaat gtcatatcaa tttggtgaat cacgtgttga
     4921 tgatgatctg actttgctca gcgaaacgct ggaagaggtt ttacgttcct caggcgatcc
     4981 cgccgatcaa aaatacattg agctgaaagc ccgcgcggaa caagcgctgg aagaggtgaa
     5041 aaaccgcgta agccatgcgt cggatagcta ttattaccgg gcaaagcagg ccgtttataa
     5101 agcggatgac tacgttcatg aaaaaccctg gcagggtatt ggcgtaggcg cggcggtagg
     5161 actggtgctt ggactgctgc tggcgcggcg ctaaatcccc ccactgaaca gaattgcaac
     5221 cctccctaaa tgaggtactg cttttttagg gcagtacccc gtataatgtg gggtttttaa
     5281 cagggagggg ccgcgtgcat tctattacta ctgcgctgga aaatctgacg cgtcagctat
     5341 cgcaagagat accggcgacg ccagggcttt gcgttttcga tgcgcctttc cctttaaacg
     5401 atgccttcga tgcattgagc tggctggcca gccagtcatc ctttccgcaa ttctactggc
     5461 aacagcgcaa tggcgacgaa gaagctgccg ttctcggggc catcaccgtc ttttcatcgc
     5521 tcgatctggc gcaacggttt ttacgtcagc acgcgcagcc tgacctgcgt atttgggggc
     5581 tgaatgcgtt cgagccgaaa gagggctact tattgctgcc gaggctggag tggcgacgta
     5641 gcggtggtac ggcgacctta cgcttacatc tgcacagtga cgtttcgcta cgcgatgatg
     5701 cgcgcctggc gaaagcgttt ctcgcttctc tggtcggtat taagcctgtt ccggcgctgc
     5761 gcctttcgct cacgagcgaa caacactggc cggacaaaga cggttgggtg aagctgattc
     5821 agcaggccac ccacactatt gcgcaagagg cgtttgataa agttgtgctg gcgcgggcca
     5881 ccgacttaca attctcccgt ccggtcaatg ccgccgcgat gatggcgtcc agtcgtcgtt
     5941 taaatctcaa ctgctaccac ttttttatgg ccttttccgc cgataccgcc tttctgggat
     6001 catcgccgga gcggctctgg cggcgtcgtg aaacggcgct gcgtaccgaa gcgctggccg
     6061 ggacggtggc gaaccatccg gataaccata aagcctggca gcttggcgaa tggttaatga
     6121 aagacgataa aaaccagcga gaaaatatgc tggttgtcga agacatctgc cagcgactgc
     6181 aaaactgcac ccactcgctg gatgtgctgc cgccgcaggt gctcagactg cgcaaggtac
     6241 agcatttgcg ccgctgtatc tggacggcgc ttaatcaggc ggacgacacg ctctgcctgc
     6301 accagttaca gcctaccgca gcggtcgccg ggatccctcg tgaacccgcg cgttgtttta
     6361 tagaacaaca tgagccgttc gaacgtgaat ggtatgccgg gtcggcaggc tatctctcca
     6421 cgcggcaaag tgagttttgc gtgacgttac gttcagccaa agtgacggcc aatgtggtgc
     6481 ggttgtatgc cggcgcggga atcgtccgcg gctccgatcc ggaacaggaa tggcaggaaa
     6541 tagataataa agcggccggg ttacgtacct tattgcagat ggacgcgtaa tgagtcacat
     6601 attcccgacc catatcaata atccattttt gcagctcttt atacttagtc ccaatgattg
     6661 ataccggaca aactcatgtc agtaagtgca tttaaccggc gctgggcggc ggtcatcctg
     6721 gaagccttaa cccgtcatgg cgtcaggcat gtttgtatcg cccctggttc ccgttccacg
     6781 ccgctcacgt tggcggcggc agagaatcct gcttttattc accatacgca ctttgatgag
     6841 cgtgggcttg gtcatttggc gttagggctg gcgaaagtca gccaacagcc ggttgccgtt
     6901 attgtcactt caggtaccgc cgtggcgaac ctctatccgg cgctgattga ggcgggtctg
     6961 acgggcgaga agctcatttt acttaccgcc gatcgcccgc cggagctgat tgactgcggc
     7021 gccaaccagg cgatccgtca ggcggggatg tttgcctcgc acccctccca aactctgtcg
     7081 ttgccgcgtc ccacgcagga tattccggcg cgctggctgg tgtcgaccat cgacaatgcg
     7141 ctcgccatgc ttcatgcggg cgcgctgcac attaactgtc cttttgccga accgctgtat
     7201 ggcgatatga atgacaccgg tctggtctgg cagcagcgtc tcggcgactg gtggcaggat
     7261 gaaaaaccct ggctgcgcga agcgcgtcga ctggcaagcg acaaacagcg cgactggttc
     7321 ttctggcgac aaaaacgcgg tgtcgttgtc gccgggcgta tgagcgcgga agaaggcaaa
     7381 aaagtggcgc agtgggcgca aactctggga tggccattaa ttggcgacgt attgtcgcaa
     7441 accgggcagc cgctgccgtg cgccgacctg tggctcggca
//
LOCUS       DAGWFR010000183         7402 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.185, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000183 DAGWFR010000000
VERSION     DAGWFR010000183.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 7402)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7402)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7402
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.185"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(1..1271)
                     /gene="treA"
                     /locus_tag="MOX77_003916"
                     /pseudo
     CDS             complement(1..1271)
                     /gene="treA"
                     /locus_tag="MOX77_003916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460752.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha,alpha-trehalase TreA"
     gene            complement(1485..2759)
                     /locus_tag="MOX77_003917"
                     /pseudo
     CDS             complement(1485..2759)
                     /locus_tag="MOX77_003917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005122303.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
     gene            complement(3155..3244)
                     /gene="cbdX"
                     /locus_tag="MOX77_003918"
     CDS             complement(3155..3244)
                     /gene="cbdX"
                     /locus_tag="MOX77_003918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bd-II oxidase subunit CbdX"
                     /protein_id="HCA3359319.1"
                     /translation="MWYLLWFVGILLMCSLSTLVLVWLESRQQ"
     gene            complement(3257..4393)
                     /gene="appB"
                     /locus_tag="MOX77_003919"
     CDS             complement(3257..4393)
                     /gene="appB"
                     /locus_tag="MOX77_003919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HCA3359320.1"
                     /translation="MLDYETLRFIWWLLIGVILVAFMVTDGFDMGVGCLLPLIARNDD
                     ERRVLINSVGAHWEGNQVWLILAGGALFAAWPRVYAAAFSGFYVAMILVLCALFLRPL
                     AFDYRGKIANARWRALWDTGLVIGSLVPPVVFGIAFGNLFLGVPFAFTPQLHVDYFGT
                     FWQLLSPFALLCGLLSLSLVIMQGGVWLQLKTEGVIRQRALSATRHSALLIVICFLLA
                     GYWLWAGVDGFVLLTQDANGPSNPLLKGVAILPGAWMNHFIRSPLLLIIPLLGMILPI
                     LAFYACLRGQTIRGFLFASLTQACVIFTAGITLFPFVMPSSVSPLSSLTVWDSTSSQM
                     TLEIMLVIVLIFLPIVLLYTLWSYYKMLGRINLETLRRNDHELY"
     gene            complement(4405..5949)
                     /gene="appC"
                     /locus_tag="MOX77_003920"
     CDS             complement(4405..5949)
                     /gene="appC"
                     /locus_tag="MOX77_003920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bd-II oxidase subunit 1"
                     /protein_id="HCA3359321.1"
                     /translation="MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAVMETIYVVTG
                     KTVYRDMTRFWGKLFGINFALGVAIGLTMEFQFGTNWSLYSNYVGDIFGAPLAMEALL
                     AFFLESTFVGLFFFGWQRLNKYQHLLVTWLVAFGSNISALWILNANGWMQYPTGAHFN
                     IDTLRMEMSSFSDLVFNPVSQVKFVHTVMSGYVTGAMFIMSISALYLLRGREREVALR
                     SFAIGSVFGTLAILGTLQLGDSSAYEVAQIQPVKLAAMEGEWQTEPAPAPFHLIAWPQ
                     QEQERNAFAVKIPALLGILATHSLDTPVPGLKNLMDDALPRLKRGREAWLLMQEIAQG
                     NRSPQVLNAFHAVEGDLGYGILLAKYAPDMNHVTPEQYRAAQRGAIPQVAPVFWSFRI
                     MVGCGSLLLVVMLIALIQTLRMRIDQHRWVLRMTLWSLPLPWIAIEAGWFMTEFGRQP
                     WAIQDILPTWYAHSALTPGQLAFSMGLILGLYTLFLIAEVYLMQKYARLGPSAMQHQQ
                     QAQQQG"
     gene            complement(6024..6872)
                     /locus_tag="MOX77_003921"
     CDS             complement(6024..6872)
                     /locus_tag="MOX77_003921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase expression/formation protein"
                     /protein_id="HCA3359322.1"
                     /translation="MSNAFFHLLGPGTQPDDASFSMNPLPLTCQVNGDPSMAALERCA
                     HSPAVMALLTDLRGQLARRIPEVGDVLGWELSPLNADDLSFLNTLLGEGEVSVRIQHP
                     DGSESEIQETIFCGLWRVRHLHNRRLLTDRLEAGSAPLTLWQAATADTLPDDSLLPPP
                     VAGLMNGLPLAHELLAHVRDPALQPHSINLTQLPLSEADRLFLARLCGHGNIQIRISG
                     YGESQINATALRHLWHVRCLDALKGPLLDSYEICPLPELVLAAPEDLADSRQRLDEVC
                     RWLETR"
     gene            complement(6869..7273)
                     /gene="hyaE"
                     /locus_tag="MOX77_003922"
     CDS             complement(6869..7273)
                     /gene="hyaE"
                     /locus_tag="MOX77_003922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase-1 operon protein HyaE"
                     /protein_id="HCA3359323.1"
                     /translation="MANDTPFSALWQRLLTRGWQPVEASTVDDWIKRIGDGVILLSSD
                     PRRTPEVSDNPVMIAELLREFPQFDWQVAVADLEQSETIGDRFNVRRFPATLVFTDGE
                     LRGALSGIHPWAELLTLMRSMVDTPAAQETAQ"
     gene            complement(7263..>7402)
                     /locus_tag="MOX77_003923"
     CDS             complement(7263..>7402)
                     /locus_tag="MOX77_003923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460745.1"
                     /note="HyaD; endopeptidase involved in the cleavage of the
                     C-terminus end of HyaB (the large subunit of hydrogenase
                     1); Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hydrogenase 1 maturation protease"
                     /protein_id="HCA3359324.1"
                     /translation="AAWGIVPQANEVARCLNYKCLSMENYEGVRIRQYQTRLEGKRSG
                     E"
BASE COUNT         1830 a         2080 c         1981 g         1511 t
ORIGIN      
        1 tctttcgcgg cggcgtttac atagagcggg aacagcgcgg cagcggtgag ttggtcacgg
       61 attttattgt tctgcagatc gtagtcggca taccaaccct ctttgttatt ccacagatgc
      121 atttcaatgg ctttttgccg cgcgttggcc agcgcgtcat attgcgaggc tttggcccga
      181 tcgcccgccg cagcgctggc gcgggcgagg gttttctcca gctgatacag cagagcgtta
      241 agatcgacag ggacaatcgt ggtggtacga atggtactga gctgctgcgg attatccatc
      301 cagcgggagc tgaaatccca gccggaggcg gcagcagatc ggaggtctcg atagatctcc
      361 gttgccgggc ggctggggtt gcttttggcg gtagcgatat cttcaaccca ggattcaggg
      421 cggggcgtat cccgatcgtc ccagtagcgg ttgagaacgc tgccgtcctc cagtttgacg
      481 acgcgttggt tttgttgccc tggctgcaat gtctcaacgc cctccatcca gtaggcgtac
      541 tctttttgca gttgcggcag gtattctttc agcgcatcgt caccttcatg ttgcaccagt
      601 aattcaacca taaacgcaaa gaaaggcggc tgtgaacgac tcaggtagta ggtacggttg
      661 ccgttaggaa tataccccca ggcgtcaatt tcgtaaccaa agttcgctac catatccgcc
      721 accttatccc agtgcccgct ttccgccagc cccagcatcg taaagtagct gtcccagtag
      781 taaatctccc tgaatcgccc acccggtacg acataggatt caggcaacgg caagagcgag
      841 tcccactttt cgacgttttt agttgaacgg gtcagcaccg gccacaggcc atcaatatgt
      901 tcacgcaatg attgcccggc aggcgggaca tatttttcac ccgctttcgg cagggtgaag
      961 ttaacatcaa caaaatgacg caaatcgaag ccggactagt tccgctgcat acgataatcc
     1021 gcaagaatca tgagcggatc gctattaggt atggcgtcag caaaggtttt ctgatcgggg
     1081 aagagttttg cattctggac atcattaaag agcgggccaa gcaaaatatc cggcggctgc
     1141 ggagtttcag tgtcggaaga cgggtctgcg gcagtcgccg aaaacgatgc aaacgtcagc
     1201 agcgtccctg ccagcgccag ttttatggct ttctgtagta gaacagaacg gcgaatctct
     1261 gggggtatca tcaagttatc tccttagcag tgagccaaag ccaacggcat ttaccatgac
     1321 aaaaccttag tctacgatga ccagatacgc gtgattgaac cgctattttg cgaacaaaca
     1381 gacattttat tgagacagaa tttatcggcg cgcgcgtgga aaacggggta tacagacaaa
     1441 aaatccacgc cgggacgtgg attttagcgc aatgatttgt cgccttaacc tggatagata
     1501 ccgcgatctt tacgggccag cagaatgcgc tcacaggcga caatataggc tgcggtgcgc
     1561 agagaacagg atttctcagc cgctttctcc cagacatgga cgatcgcgtc ggtcatgatt
     1621 ttgtccatgc gcgcgttgat ctcttcttcg ctccagaaga agctggccat atcttgtacc
     1681 cattcgaagt agctgacggt tacgccgcct gcgttacaga ccacgtcagg caccacaagg
     1741 ataccacggc tggccagaac atcatcagca tccggatagg tcgggccgtt agccccttcc
     1801 agcaccagct tacacgtcag ggcttccgcg cgctgacgag ttatctggcc ttcaagcgcc
     1861 gccgggatca gaatatccat ctccagacgc cagaacgcat cgctggcgat agtttccgcg
     1921 cccgggaaac cggctatctg tttgtgttct gtctgccatg ccgtgagcgc cttcatgtca
     1981 ataccggtgg cgttaaacag cgtcgcggta tgatcctgaa tcgccacgac acgggcgcca
     2041 gcgcctgcaa acagacgcgc ggcttcgctg ccgacgttac caaaaccctg aaccgcaacg
     2101 cgagcgcctt caacggcgat attcgcccga cgcgcggctt ccagcccgct gacgaaaacg
     2161 ccgcgccccg tcgccttttc acgacccagc gaaccgccaa gatggatagg cttaccggtg
     2221 acgacgccag tgaccgtcgt gccatgattc atggaatacg tatccatcat ccaggccatc
     2281 actttaccgt tggtgccgac atccggcgca ggaatatctt tctgcggccc gatgataatg
     2341 ccgatctcgc tggtatagcg gcgggtcaaa cgctccagtt caccttccga cagcgagaac
     2401 ggatcgacgc ggatgccgcc tttggcgccg ccgtacggca gattcagcgc ggcacatttg
     2461 atggtcatcc atgctgacag ggccatcact tcattgagat caacgtcagg atggtagcga
     2521 acaccgcctt tacccggacc tcgggagagg ttgtgctgca cgcgatatcc ttcgaaatga
     2581 cgaatagtgc catcatccat ttgtaccgga atatcgacga tcagagcgcg ttttgggtgg
     2641 cgcagagtat ccacctaggg ggataactcg cccagataag gggccacacg ctcgatttgt
     2701 tgcaggtagg tattccaggc agatgtgctg ctatctgaag cgtaagataa cttatccatg
     2761 ataaacctta gtgataaaag taatatgttc tttaattgac cgtggtacat agtagatcac
     2821 accatgtagc gataaattta acactttttt taaacaatta actcagatca aaaatggcag
     2881 gcagttggat tttcgttatg attttggatg agaagtggtt aactatccgc tataagaggt
     2941 gatatatcgc taattatgca attaattgct taaatatgcg tgatatgtgc aaggcggcta
     3001 tttgtcataa ttatgacgca cctctaaaag taaagattat gataacgaca tgtatcaatg
     3061 ttatgtcgtc ctgtcggcgg ggaaacgtct tcgccaggcg cgtaaaaaga taaaaataac
     3121 cggagtcaga cggctctgac cccggtttac ctctttattg ttgacgcgac tcaagccaca
     3181 ccagcaccag cgtcgacagt gagcacatca gcagaatgcc gacaaaccac agtaaatacc
     3241 acatcgctct cgctccctaa taaagttcat gatcgttgcg gcggagggtc tccaggttga
     3301 tacgccccaa cattttgtaa tagctccaca gcgtatagag cagtacgatt ggcagaaaaa
     3361 tcagcacaat caccagcatg atttcgagcg tcatctggct ggaggtgctg tcccacaccg
     3421 tcaggctgga gagaggacta acactcgacg gcatcacaaa aggaaatagc gttatgccgg
     3481 cggtaaagat gacgcaggcc tgggtcaggg aagcgaacag aaatccacga atagtctgac
     3541 cgcgaaggca ggcatagaaa gccagaatcg gcaggatcat accgagcaac gggatgatga
     3601 gcagtagcgg cgagcgtata aagtggttca tccatgcgcc agggagtatc gccacgcctt
     3661 ttaagagcgg attggaaggg ccgttggcat cctgcgtgag taagacaaag ccatcaacgc
     3721 cggcccacag ccagtaaccg gccagcagga agcagatcac gatcagcagc gcgctgtggc
     3781 gggtggccga cagagcccgt tgacgaataa cgccctccgt tttcaactgt aaccagacgc
     3841 ctccttgcat aatcaccaac gacagactca ataatccaca cagtagggca aagggcgaga
     3901 gtaactgcca gaaggtgcca aaatagtcaa catgaagctg cggcgtgaag gcaaacggca
     3961 cgcctaaaaa caggttgccg aacgcgatgc cgaatacaac ggggggcacc aggctgccga
     4021 taaccagacc ggtatcccac agcgcgcgcc agcgggcatt ggcgatttta ccccgataat
     4081 caaaggccag cgggcgaagg aagagggcac acagcaccag gatcatcgcc acataaaaac
     4141 cggaaaacgc ggcggcatag acccgtggcc aggcggcgaa taatgccccg cccgcgagaa
     4201 tcaaccatac ctggtttcct tcccagtggg cgccgacgct attgatcaat acccggcgtt
     4261 cgtcatcgtt gcgcgctatc agcgggagca ggcaaccgac acccatatca aacccgtcag
     4321 ttaccataaa tgccactagg atgacgccga tcagcagcca ccaaatgaac cgcaacgttt
     4381 cataatccaa catgattgtc tcctttatcc ctgttgttgc gcttgttgtt gatgttgcat
     4441 ggcgctcggc ccaagacgcg cgtacttctg catcagatag acttccgcga ttaaaaacag
     4501 ggtgtaaagt ccgaggataa gccccattga gaaggccaac tggcccggcg tcagcgcgga
     4561 gtgagcgtac caggtcggca gaatgtcctg aatcgcccag ggctgacggc caaactccgt
     4621 cataaaccaa ccggcttcaa tggcaatcca cggtaacggc aggctccaca gcgtcatacg
     4681 caatacccag cgatgctggt cgatacgcat tcgcagcgtc tgtatcaacg caatcaacat
     4741 caccactaac agcagcgaac cgcagccgac cataatacgg aaactccaga acaccggcgc
     4801 cacctgagga atagcgccac gctgggccgc acgatactgc tccggcgtca catggttcat
     4861 atccggggca tatttcgcca gcagaatgcc gtaccccaga tcgccctcaa cggcgtgaaa
     4921 cgcattcagt acctgcggcg agcgattgcc ttgcgctatc tcctgcatga gtagccaggc
     4981 ctcccggcca cgcttcaggc gcggcagagc gtcgtccatc aggtttttta accccggaac
     5041 cggcgtatcc agcgaatggg tggccagaat acccagcaga gcagggatct tcacggcaaa
     5101 tgcattacgc tcctgttcct gctgcggcca ggcaatcaga tgaaacggcg cgggcgcggg
     5161 ttcggtttgc cattcgcctt ccatcgccgc cagtttcacc ggctgaattt gggcgacctc
     5221 gtaggccgaa ctgtcgccca gttgcagggt tcccagaatg gccagggtgc cgaatactga
     5281 gccgatagca aacgagcgca aggccacctc acgctcgcgg ccacgtagca gatacaaggc
     5341 gctgatagac ataataaaca tggcgccggt gacataaccg gacatgacgg tatggacgaa
     5401 tttcacctgg ctcaccgggt taaagaccag atcgctgaag ctgctcattt ccatccgtaa
     5461 cgtatcgatg ttgaaatgag cgccggtagg atactgcatc cagccattgg cattcagaat
     5521 ccataatgct gaaatattgg agccgaaggc caccagccag gtgaccagca ggtgttggta
     5581 tttattcagc cgctgccagc cgaaaaagaa caggccgaca aaagtggatt cgagaaagaa
     5641 ggccagtaac gcttccatcg ccagcggcgc gccgaagata tcgcccacat agttggaata
     5701 gagcgaccag ttagtcccga actgaaactc catggtcagg ccgatagcca caccgagagc
     5761 aaaattgatc ccgaagagct tgccccagaa acgcgtcata tcgcggtaga cggttttccc
     5821 cgtcaccaca tagatcgtct ccatgacggc cagcaaaaaa atcagcccaa gcgtaagagg
     5881 aacaaataaa aagtgataca gcgcggtcag cgcaaactgc cagcgcgata agtcaatgac
     5941 atcccacatg ctaactcctg taggcagaaa gagagtaaaa agctaatcaa taccggacac
     6001 cggtgacgtt cctgttgaga gcgctagcgc gtctccagcc atcggcagac ttcatccagg
     6061 cgctggcgcg aatcggccag atcttccggg gccgccagta ccagctccgg caaaggacaa
     6121 atctcatagc tatcgagcaa cggcccttta agggcgtcca gacagcgcac atgccagaga
     6181 tggcgcaatg ctgtggcgtt gatttggctt tcgccatacc cggagatgcg aatctggatg
     6241 ttcccgtgtc cgcataaacg cgccagaaaa agacgatcgg cctcgctgag cggcagttgg
     6301 gtcaaattga tgctgtgagg ttgcaacgcc ggatcgcgta cgtgcgccaa taactcatgg
     6361 gccagcggca gtccattcat caggccagcg acaggcggag gcagcagaga gtcgtcaggc
     6421 agcgtatcgg cagtcgccgc ttgccacaat gtcaggggcg cgctacccgc ttccagacga
     6481 tccgtcagca gacgtcggtt atgcagatgg cgtacccgcc acaggccgca gaagatggtc
     6541 tcctggatct cgctttcact cccgtccgga tgctgaatgc gtaccgagac ttcgccttcg
     6601 cccaatagcg tattgaggaa tgagagatca tcggcattca ggggagataa ctcccatccc
     6661 agcacgtcgc cgacttccgg gatgcgccgg gcaagctgac ctcgcagatc ggtcaacaat
     6721 gccatcaccg ccgggctgtg agcgcagcgt tccagcgccg ccatacttgg gtcgccattg
     6781 acctgacagg tgagcggtag gggattcatc gagaaactgg cgtcatcagg ctgcgtgcct
     6841 ggccccagca gatgaaaaaa ggcgttgctc attgtgctgt ctcctgcgct gcgggagtgt
     6901 caaccatcga acgcatcagc gtgagcagtt cagcccaggg atgaatgccg ctgagcgcgc
     6961 cgcgtagctc gccgtctgta aaaaccaacg tcgccggaaa ccgacgtaca ttaaagcgat
     7021 cgccgatagt ttcgctttgt tcaaggtcgg ccaccgccac ctgccagtca aactgcggga
     7081 actcacgcag gagttcggca atcatcaccg ggttatcgct gacttccggc gtacgccgcg
     7141 gatcgctact taacaggatg acgccatctc caatccgttt gatccagtcg tctaccgtgg
     7201 aagcctctac cggttgccat ccacgggtta acaggcgttg ccatagcgca gagaacgggg
     7261 tgtcattcgc cacttctttt gccctccaga cgtgtctgat actgacgtat gcgcactccc
     7321 tcataatttt ccatcgacag gcatttatag ttcaggcagc gtgcgacctc atttgcctgc
     7381 ggtacgatcc cccaggcggc ca
//
LOCUS       DAGWFR010000184         7372 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.186, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000184 DAGWFR010000000
VERSION     DAGWFR010000184.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 7372)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7372)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7372
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.186"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..251)
                     /locus_tag="MOX77_003924"
     CDS             complement(<1..251)
                     /locus_tag="MOX77_003924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459594.1"
                     /note="member of the iron-containing alcohol dehydrogenase
                     family; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HCA3359325.1"
                     /translation="MNHTEIRVVTGPANYFSHAGSLERLTDFFTPEQLSHAVWVYGER
                     AIAAARPYLPEAFERAGAKHLQFTGHCSERHVAQLAHAC"
     gene            378..1538
                     /locus_tag="MOX77_003925"
     CDS             378..1538
                     /locus_tag="MOX77_003925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HCA3359326.1"
                     /translation="MRNNPLIPKSKLPNLGTTIFTQMSALAQKHQAINLSQGFPDFDG
                     PSYLHERLAYHVAQGANQYAPMTGAQALREAIADKTAEIYGYRPDDVSDITVTAGATE
                     ALYAAITALVRAGDEVICFDPSYDSYAPAVALSGGVLKRIALTPPHFRVDWQAFSALL
                     SERTRLVILNTPHNPTATVWRQADIEALWQAIGEREIYVLSDEVYEHICFAAEGHASV
                     LAHPQLRERAVAVSSFGKTFHMTGWKIGYCVAPAAISAEIRKVHQYLTFCVNTPAQLA
                     LADMLRAAPEHYRALPDFYRKKRDVLVNALAQSRLKVLPCEGTYFLLIDYSAVSTLND
                     VEFCQWLTEEVGVAAIPLSVFCAAPFPHQLIRLCFAKQESTLLAAAERLCKL"
     gene            complement(1539..2156)
                     /locus_tag="MOX77_003926"
     CDS             complement(1539..2156)
                     /locus_tag="MOX77_003926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB-like nuclease domain-containing protein"
                     /protein_id="HCA3359327.1"
                     /translation="MQHRLTTEITHFLSGLPEEERIAAINEFRRAIHNVSPFRDEPVD
                     CVLWVKNDHISPNDYNPNNVAPPEKKLLLKSIEKDGFTQPIVVVKANTEEYEIVDGFH
                     RHELGKGKAVLKRRLKGYLPVACLDRERHERMAATIRHNRARGRHQIHAMSEIVRELS
                     QLGWDESKIGQELGMDADEVLRLKQINGLQELFADRRFSRAWTVK"
     gene            complement(2129..3364)
                     /locus_tag="MOX77_003927"
     CDS             complement(2129..3364)
                     /locus_tag="MOX77_003927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoadenosine phosphosulfate reductase"
                     /protein_id="HCA3359328.1"
                     /translation="MSVYKVPLEQNVLEAAQERITWPLETLPRVCVSFSGGKDSGLML
                     HLTATLARKMNKKIHVLFIDWEAQFSCTIAYIESLREYYADVIERFYWVALPLTTQNS
                     LSQYQPEWQCWQPGTDWVRQPPEDAITDPAFFSFYQHGMTFEQFVRDFADWFSEKRPA
                     AMLVGIRSDESYNRFVAIANSHKLRFADDKPWTTLAPKGHTWYIYPIYDWKTADIWTW
                     FAKTGKSCNPLYNLMYQAGVPVRYMRICEPFGPEQRQGLWLYHVIEPERWAAMYARVS
                     GVLSGGIYAGQDSHFYGHRKILKPDHLNWEEYALLLLHSMPEVTAEHYRNKIAVYLQW
                     YKKKGMNTIPQTQQGDIGSRDIPSWRRICKVLLNNDYWCRALSFSPTKPKSYQRYNER
                     MKAKRQEWGILCNTDSQPK"
     gene            complement(3530..4432)
                     /locus_tag="MOX77_003928"
     CDS             complement(3530..4432)
                     /locus_tag="MOX77_003928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016506006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCA3359329.1"
                     /translation="MANLYDLKKFDLNLLVIFECIYQHLSISKAAETLYITPSAVSQS
                     LQRLRTQFNDPLFIRSGKGITPTVTGINLHYHLENNLNSLEQTINIMNQSSLKKKFII
                     YSPQLLITQYAMKLVKYIRKDPQVEIEHHDILTTDELPEDLLAYRKADVVVSMAPLNN
                     RSIVCTHFNRLECILVCSENHPRLGDTATIDEILQESFTQLVSRATGMKEYHSLIDDV
                     LGERIIGLRSKSVMTIANSISSTELIGFLPQTFVDYYSSSIKLKKVATPFTIAPIQFY
                     LMYNRASLNNSGFAELIEYITKKR"
     gene            complement(4749..5495)
                     /gene="dsbG"
                     /locus_tag="MOX77_003929"
     CDS             complement(4749..5495)
                     /gene="dsbG"
                     /locus_tag="MOX77_003929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbG"
                     /protein_id="HCA3359330.1"
                     /translation="MIKRTLLLAMLPILAHAEELPALVKAIEKQSITILKSFEAPGGM
                     KGYLGKYQDMGVTIYLTPDGKHAISGYMYNEKGENLSNALIEKEIYAPAGREMWQKME
                     KASWILDGKKDAPVVLYVFADPFCPYCKQFWQQARPWVESGKVQLRTLLVGVIKPESP
                     ATAAAILAAKNPAKTWHDYEASAGKMKLEVPASIPPAQMKVINQNQQLMDDLGANATP
                     AIYYMNKDKILQQVVGLPEKAQLDAMMGQP"
     gene            5935..6498
                     /gene="ahpC"
                     /locus_tag="MOX77_003930"
     CDS             5935..6498
                     /gene="ahpC"
                     /locus_tag="MOX77_003930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003858764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkyl hydroperoxide reductase subunit C"
                     /protein_id="HCA3359331.1"
                     /translation="MSLINTKIKPFKNQAFKNGEFIEVTEKDTEGRWSVFFFYPADFT
                     FVCPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTG
                     ALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAA
                     HPGEVCPAKWKEGEATLAPSLDLVGKI"
     gene            6740..>7372
                     /locus_tag="MOX77_003931"
     CDS             6740..>7372
                     /locus_tag="MOX77_003931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HCA3359332.1"
                     /translation="MLDTNMKTQLRAYLEKLTKPVELIATLDDSAKSAEIKELLAEIA
                     ELSDKVTFKEDNTLPVRKPSFLITNPGSQQGPRFAGSPLGHEFTSLVLALLWTGGHPS
                     KEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNPRIKHTAIDGGTFQ
                     NEITERNVMGVPAVFVNGKEFGQGRMTLTEIVAKVDTGAEKRAAEALNKRD"
BASE COUNT         1809 a         1756 c         1829 g         1978 t
ORIGIN      
        1 ttgcaggcgt gcgccagttg ggcaacatgg cgttcgctac aatggccggt aaactgcaga
       61 tgttttgcgc cagcacgttc aaacgcttcc ggcaggtaag gccgggcggc ggcaatcgcg
      121 cgttcgccgt acacccaaac agcgtgggaa agctgttccg gcgtgaaaaa gtcggtcagt
      181 ctttcgaggc ttcctgcatg ggaaaaataa ttcgccgggc cggtaacgac gcggatctca
      241 gtgtggttca tgttgtgttg tccttagggt cttctcaccg ctgttattat atttagacat
      301 ctaaacgtct tgattgccaa atactaacac cctgtgatag tgtgtcaaca accacatcac
      361 tggcgggtat gaagataatg agaaataacc cactgattcc aaagagcaaa ttgcccaatc
      421 ttggcaccac gatttttacg caaatgagcg cgctggcgca gaaacatcag gcaataaatt
      481 tatcgcaagg cttccctgat tttgatggtc cttcttattt gcacgagcgg ttggcttatc
      541 atgtcgcgca gggcgcgaat caatatgcgc cgatgacggg cgcgcaggcg ctgcgggagg
      601 ccatagccga taaaacggcg gaaatatatg gttatcgacc cgatgacgta agtgatatca
      661 ccgtcacggc gggcgcgaca gaagcgctgt atgcggcgat taccgcgctg gtgcgggcag
      721 gggatgaggt tatctgtttc gatcccagtt acgacagcta tgccccggcc gtggcgcttt
      781 ccggcggcgt gttaaaacgc atagcgctta cgccgccgca ttttcgcgtc gactggcagg
      841 cgttttcggc gttgcttagc gagcgcacgc ggctggtgat cctcaatacg ccgcataatc
      901 ccaccgctac cgtctggcgt caggcggata tcgaggcgct gtggcaggct atcggcgagc
      961 gggaaattta tgtattaagc gatgaagtgt acgagcatat ttgttttgcc gccgaaggtc
     1021 atgccagcgt actggcgcac cctcagttac gagagcgggc ggttgccgtt tcatcgtttg
     1081 gtaaaacctt tcatatgacg ggatggaaga ttggttactg cgttgcgcct gcggccatta
     1141 gcgccgaaat acgcaaagtt caccagtacc tgacgttttg cgtcaatacg ccggcgcaac
     1201 tggcgctggc ggatatgctg cgcgccgcgc cggaacacta tcgcgcgtta cccgattttt
     1261 accggaaaaa acgcgatgtg ctggttaacg cgctggcgca aagccgatta aaagtgctgc
     1321 cctgtgaagg tacctatttt ttgttaatcg attacagcgc agtgtcgacg ctaaatgacg
     1381 ttgagttttg tcagtggcta accgaagaag tcggtgtcgc cgctattccg ctctctgtct
     1441 tttgcgccgc ccctttcccg catcagctta tacgtttatg tttcgctaaa caggaatcaa
     1501 cgctgctggc cgccgcagag cgcctgtgta aactgtagtt atttaaccgt ccacgctctg
     1561 gagaatcgac ggtctgcaaa gagttcctgc agtccgttga tctgtttcag gcgcaggact
     1621 tcatcggcgt ccatacctaa ctcctgtccg attttgctct cgtcccagcc tagctgagaa
     1681 agttcgcgta cgatttcgga catagcgtgg atctggtggc gtccgcgcgc gcggttatgc
     1741 cggatggttg ccgccatccg ttcgtgacgt tctctgtcca gacacgctac cggcagataa
     1801 cctttcaggc gccttttcag gaccgctttt cctttgccca actcatgacg gtgaaagccg
     1861 tctacaatct cgtattcctc cgtattggcc tttaccacca caatcggctg agtaaagcca
     1921 tctttttcaa tcgatttaag cagcaatttt ttctccggtg gcgcaacgtt attcgggttg
     1981 tagtcattag gcgaaatatg atcgtttttc acccacagga cacaatcgac tggctcatcg
     2041 cgaaaaggac taacgttatg tatcgccctt ctaaattcat taatggcggc gatcctttcc
     2101 tcttcaggca gtccagagag aaagtgagtt atttcggttg tgagtcggtg ttgcataaga
     2161 tcccccattc ctggcgttta gctttcatgc gttcgttata acgctggtaa ctcttaggtt
     2221 ttgtcggact gaatgacagc gcccggcacc agtaatcatt gttcagtaat actttgcaga
     2281 tccgtcgcca tgacggaata tcccgcgatc cgatatcgcc ctgctgcgtc tgtggaatgg
     2341 tgttcatgcc ttttttctta taccactgca aataaacggc gattttatta cggtaatgtt
     2401 cggcagtgac ttcaggcata ctgtgtagca ggagcagcgc gtactcctcc cagttaaggt
     2461 gatcgggttt taaaattttc cggtggccgt aaaaatggct gtcctgcccg gcgtatattc
     2521 ctccgctgag tacgccgctg actctggcgt acatggccgc ccagcgctca ggttcgataa
     2581 catgatacag ccataacccc tgccgttgtt ccgggccgaa tggttcgcaa atacgcatgt
     2641 aacggaccgg tacgccagcc tgatacatca aattatacaa ggggttacat gatttacctg
     2701 ttttggcgaa ccaggtccag atatctgcgg ttttccagtc atagatgggg tagatatacc
     2761 aggtgtgccc cttgggggcc aacgtggtcc agggcttatc gtcggcaaag cgcagcttat
     2821 gcgagttagc gatagcgaca aaccggttat aggattcgtc ggaacgaata ccgaccagca
     2881 tagcggcagg gcgcttttct gaaaaccagt cggcaaaatc gcgaacgaac tgttcaaaag
     2941 tcatgccgtg ttgataaaag gaaaaaaagg ccggatcggt aatcgcatct tctggcggtt
     3001 gtcgtaccca gtcggttccc ggctgccaac actgccactc cggctggtat tgtgaaaggg
     3061 aattttgtgt ggttaagggt aatgcgaccc aataaaaacg ctcaataacg tccgcgtagt
     3121 attcacgtaa cgattcaata taagcgatag tacaggagaa ttgcgcttcc cagtcaatga
     3181 aaagaacgtg gatcttttta ttcattttgc gcgccaacgt tgccgtcagg tgcagcataa
     3241 gtcctgaatc tttaccacca gaaaatgaga cgcagacccg gggtaaagtt tccaggggcc
     3301 atgttatacg ctcttgagcc gcttccagaa cattttgctc aagcggaact ttataaaccg
     3361 acatctctgg atagtctcca atgtgttaac tacaatatat tcgcaataat taacataaag
     3421 gataatctga ttatatgaac ttgcaatgtc ttattatatt ctctaagtaa atacattcta
     3481 cgaatgtata cacttaattt atattattac tcgttctctg atctccttat taacgctttt
     3541 ttgtgatgta ctcaatgagc tcagcaaatc cgctattatt cagcgaagct ctattgtaca
     3601 taagatagaa ttgtatagga gcaatggtaa aaggtgtggc gactttttta agtttgatag
     3661 aggaagagta atagtcaaca aatgtttgtg gtaaaaaacc aataagctcc gtggagctga
     3721 tggagttggc gatagtcatc accgatttgc ttcttaaacc aattattctc tcccccagca
     3781 catcatctat aagtgaatga tactctttca taccggttgc ccgggagacg agttgcgtaa
     3841 atgactcttg tagaatttca tcgatagtgg cggtgtcgcc tagtcgggga tgattttcac
     3901 tgcaaaccag gatacattct agcctattaa agtgagtaca aacaatagaa cgattattaa
     3961 gtggggccat tgaaaccaca acatctgctt tgcggtaggc aagcagatct tcaggcagtt
     4021 cgtcagtggt caaaatgtcg tgatgttcaa tttcaacctg tggatctttg cggatatatt
     4081 taactaattt catcgcatat tgggtgatca acagctgtgg gctgtagata ataaattttt
     4141 tcttcagact ggactgattc attatattaa tagtttgttc caggctgtta aggttatttt
     4201 ctaaatgata atgtaaatta atgcctgtta cggtaggcgt aattcctttg cctgagcgaa
     4261 taaatagagg atcattgaat tgcgtgcgca ggcgttgcaa tgactgactg acggcagaag
     4321 gtgtaatata gagtgtttcc gctgctttgc taatgcttaa atgttgataa atacattcaa
     4381 atataaccaa caggttaaga tcaaattttt taaggtcgta aaggttagcc atagtatctt
     4441 cccggcatta tcatggtatc ttccatgatt atgacttaat ctcaataatt taccagaatt
     4501 atgtttatta aacttaatgt agagtttatt taaactaaaa taccacagtt atgaatattt
     4561 tagcgagtaa ataattacgg taaaggcgga cataacgtac cctgatataa tcacgccgtt
     4621 agcctaaaaa ggctgtgccg gatgacattt tggtctggcg tcgcgttaat accgggaggt
     4681 ggttggcccg acaaacgtag cgctgtcggg cgtggtacgg ttaagcttct gccttgctaa
     4741 tttctgcgtt aaggctgccc catcatggcg tccagttgcg ctttttccgg taaaccaaca
     4801 acctgttgca aaatcttatc tttattcatg taataaattg ctggcgtcgc gttagcgcca
     4861 agatcgtcca ttaactgctg attctgatta atgactttca tctgcgccgg ggggatggac
     4921 gcaggaacct ccagcttcat ctttcctgcg gaggcttcat agtcatgcca ggttttcgcc
     4981 gggtttttcg cggctaaaat cgctgcggct gtggccgggc tttccggttt aatcacgccg
     5041 accagtaatg tgcgtaattg taccttgccg gattcgaccc acggacgagc ttgttgccaa
     5101 aactgcttac aataggggca gaaaggatcg gcaaagacat acagcaccac cggcgcgtct
     5161 tttttaccgt cgagtatcca tgacgctttt tccattttct gccacatttc acgtccggct
     5221 ggcgcataga tctctttttc tatcagggcg ttgctaagat tttcaccttt ttcattatac
     5281 atatagccgg aaatcgcgtg tttaccgtcc ggcgtcaggt aaatcgtgac gcccatatcc
     5341 tgatactttc cgagatagcc cttcatgccc cccggcgcct cgaaggattt caggattgtt
     5401 atgctctgtt tttcaatggc tttaaccagc gcaggcagtt cttccgcgtg ggcgagaatg
     5461 ggcagcatag caagcagcaa tgtacgttta atcatatttt tctttttaat atcaaagcga
     5521 aaagagtatt aatgatgatg cctatcgcag acataggtaa gagctggcgt gccaggattg
     5581 ccctttctgt gctggggtga tgtaatcctt ttcgctgtta cagcctttgt taaggtaatg
     5641 tagagcgcaa cacttagcca gcatatacgc tatggatttc gagtggcagg caatacgcct
     5701 gccatttgca agacgagtcg tactggctct gaagttacct acgggtagtt caggtaatgg
     5761 ggccgcctgt caggcggcct ttttacttta gatggctgac agggcgcagt gttcacaatg
     5821 tcgcccgaat cgggttgtta gttaacgctt attgatttga taatggaaac gcattagccg
     5881 aatcagcaaa atttcgttaa cttactcctc aacgaaaaca cggaggaagt atagatgtcc
     5941 ttaattaaca ccaaaatcaa acctttcaaa aaccaggcgt tcaaaaacgg tgaattcatt
     6001 gaagtcaccg agaaagatac cgaaggccgc tggagcgtct tcttcttcta cccggccgat
     6061 tttacctttg tttgcccgac tgaactgggt gacgttgccg accattacga agaactgcag
     6121 aagctgggcg tagacgttta ttccgtctca accgatactc actttacgca caaagcatgg
     6181 cacagcagct ctgaaactat cgcaaaaatc aaatatgcga tgatcggcga cccgactggc
     6241 gccctgaccc gtaacttcga caacatgcgt gaagatgaag gcctggcaga ccgtgcgacc
     6301 tttgttgttg acccgcaggg tatcattcag gcgatcgaag ttaccgctga aggtatcggc
     6361 cgtgacgcgt ctgacctgct gcgtaaaatt aaagcagcac agtatgttgc cgctcaccca
     6421 ggcgaagtat gcccggcgaa atggaaagaa ggtgaagcga ctctggctcc atccttagac
     6481 ctggtcggta aaatctaaat ttccgtcgtc tttcacgcca tagctgcgtt ggcgttgcct
     6541 gctcaccccg gtcacttact tcagtaagct cccggggatt ctcaggctag ccgccttact
     6601 ctgacgtgaa atactttgga aattgtttca gtcatgggcg catccgcgcc catttcattt
     6661 cagcaccatg acgcaagttg cattaatgca gtcccgcgaa gtcggcttgc atgatgatgt
     6721 tttcagagag ggaagaagaa tgctcgacac aaatatgaaa acccagctca gggcttacct
     6781 tgagaaactg accaaacctg ttgagctgat tgccacgctg gatgacagcg ctaaatcggc
     6841 ggaaatcaag gaactgctgg ctgaaatcgc cgagctgtcc gacaaagtca catttaaaga
     6901 agacaatact ctgccggtgc gcaagccgtc tttcctgatt acgaatccag gctctcagca
     6961 ggggccgcgc tttgccggtt ctccgctggg ccacgaattt acctcgctgg ttttggcgtt
     7021 gctgtggacc ggcggtcatc cgtcaaaaga agcgcagtcg ctgctggagc agattcgcga
     7081 tattgacggc gattttgaat tcgaaactta ttattcactc tcctgccata actgcccgga
     7141 cgtagtgcag gcgctgaacc tgatggcggt gctgaacccg cgtattaaac atacggcaat
     7201 tgatggcggc accttccaga acgaaatcac cgaacgtaac gtgatgggcg ttccggcggt
     7261 gtttgtcaac ggtaaagagt tcggccaggg acgtatgact ctgaccgaga ttgtcgctaa
     7321 agtggatact ggcgcagaaa aacgtgcggc ggaagcgctg aacaaacgcg at
//
LOCUS       DAGWFR010000185         7286 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.187, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000185 DAGWFR010000000
VERSION     DAGWFR010000185.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 7286)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7286)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7286
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.187"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..376)
                     /locus_tag="MOX77_003932"
     CDS             complement(<1..376)
                     /locus_tag="MOX77_003932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HCA3359333.1"
                     /translation="MIDGKTANEIFDSIRQHIIAGTLRAKDSLPPVRELASELKVNRN
                     TVAAAYKRLITAGLAQSLGRNGTVIKGSPSPVALEGGDPHTPLHDLSGGNPDPQRLPD
                     LSRYFARLSRTPHLYGDAPVSPE"
     gene            459..1325
                     /gene="pdxK"
                     /locus_tag="MOX77_003933"
                     /gene_synonym="thiJ"
     CDS             459..1325
                     /gene="pdxK"
                     /locus_tag="MOX77_003933"
                     /gene_synonym="thiJ"
                     /EC_number="2.7.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine/pyridoxal/pyridoxamine kinase"
                     /protein_id="HCA3359334.1"
                     /translation="MGQESDIQSVLFDDNHRALQTDIVAVQSQVVYGSVGNSIAVPAI
                     KAQGLRVTAVPTVLFSNTPHYKTFYGGIIPAEWFAGYLTALNERDALRELKAITTGYM
                     GSADQIVLLSKWLMAIRASHPEVCILVDPVIGDTDSGMYVQAEIPQAYRTHLLPQAQG
                     LTPNVFELEMLSGKPCRTLEEAVAAAQSLLSDTLKWVVITSAPGESLETITVAVVTAQ
                     VVEVFAHPRVATELKGTGDLFCAELVSGIVQGKKLTTAAKDAAQRVLEVMTWTQQCGC
                     DELILPPAGEAR"
     gene            1322..1561
                     /locus_tag="MOX77_003934"
     CDS             1322..1561
                     /locus_tag="MOX77_003934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytoplasmic protein"
                     /protein_id="HCA3359335.1"
                     /translation="MKSYRLVVRQQGRIVGHFETSGLDALEDICVARAMFGITGGYQC
                     ELQVSDSERRILESGPDGMKILMREKCFRPVTSQL"
     gene            complement(1711..2220)
                     /gene="crr"
                     /locus_tag="MOX77_003935"
     CDS             complement(1711..2220)
                     /gene="crr"
                     /locus_tag="MOX77_003935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015833547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucose transporter subunit IIA"
                     /protein_id="HCA3359336.1"
                     /translation="MGLFDKLKSLVSDDKKDTGTIEIVAPLSGEIVNIEDVPDVVFAE
                     KIVGDGIAIKPTGNKMVAPVDGTIGKIFETNHAFSIESDSGIELFVHFGIDTVELKGE
                     GFKRIAEEGQRVKVGDPVIEFDLPLLEEKAKSTLTPVVISNMDEIKELIKLSGSVTVG
                     ETPVIRIKK"
     gene            complement(2261..3988)
                     /gene="ptsI"
                     /locus_tag="MOX77_003936"
     CDS             complement(2261..3988)
                     /gene="ptsI"
                     /locus_tag="MOX77_003936"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate-protein phosphotransferase
                     PtsI"
                     /protein_id="HCA3359337.1"
                     /translation="MISGILASPGIAFGKALLLKEDEIVIDRKKISADKVDQEVERFL
                     SGRAKASAQLEAIKTKAGETFGEEKEAIFEGHIMLLEDEELEQEIIALIKDKHMTADA
                     AAHEVIEGQATALEELDDEYLKERAADVRDIGKRLLRNILGLAIIDLSAIQEEVILVA
                     ADLTPSETAQLNLQKVLGFITDAGGRTSHTSIMARSLELPAIVGTGSVTAQVKNGDYL
                     ILDAVNNQVYVNPTNDVIEQLRAVQEQVATEKAELAKLKDLPAITLDGHQVEVCANIG
                     TVRDVEGAERNGAEGVGLYRTEFLFMDRDALPTEEEQFAAYKAVAEACGSQAVIVRTM
                     DIGGDKELPYMNFPKEENPFLGWRAVRIAMDRKEILRDQVRAILRASAFGKLRIMFPM
                     IISVEEVRALRKEIEIYKQELRDEGKAFDESIEIGVMVETPAAATIARHLAKEVDFFS
                     IGTNDLTQYTLAVDRGNDMISHLYQPMSPSVLNLIKQVIDASHAEGKWTGMCGELAGD
                     ERATLLLLGMGLDEFSMSAISIPRIKKIIRNTNFEDAKVLAEQALAQPTTDELMTLVN
                     KFIEEKTIC"
     gene            complement(4037..4294)
                     /gene="ptsH"
                     /locus_tag="MOX77_003937"
     CDS             complement(4037..4294)
                     /gene="ptsH"
                     /locus_tag="MOX77_003937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003038086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphocarrier protein Hpr"
                     /protein_id="HCA3359338.1"
                     /translation="MFQQEVTITAPNGLHTRPAAQFVKEAKGFTSEITVTSNGKSASA
                     KSLFKLQTLGLTQGTVVTISAEGEDEQKAVEHLVKLMAELE"
     gene            complement(4678..5649)
                     /gene="cysK"
                     /locus_tag="MOX77_003938"
     CDS             complement(4678..5649)
                     /gene="cysK"
                     /locus_tag="MOX77_003938"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000034402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HCA3359339.1"
                     /translation="MSKIYEDNSLTIGHTPLVRLNRIGNGRILAKVESRNPSFSVKCR
                     IGANMIWDAEKRGVLKPGVELVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRK
                     LLKALGANLVLTEGAKGMKGAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKTTGPE
                     IWEDTDGQVDVFISGVGTGGTLTGVTRYIKGTKGKTDLITVAVEPTDSPVIAQALAGE
                     EIKPGPHKIQGIGAGFIPGNLDLKLIDKVVGITNEEAISTARRLMEEEGILAGISSGA
                     AVAAALKLQEDESFTNKNIVVILPSSGERYLSTALFADLFTEKELQQ"
     gene            complement(6022..6783)
                     /gene="cysZ"
                     /locus_tag="MOX77_003939"
     CDS             complement(6022..6783)
                     /gene="cysZ"
                     /locus_tag="MOX77_003939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate transporter CysZ"
                     /protein_id="HCA3359340.1"
                     /translation="MVSSSTTVPRSGVYYFSQGWKLVTLPGIRRFVILPLLVNIVLMG
                     GAFWWLFTQLDAWIPSLMSHVPDWLQWLSYLLWPIAVISVLLVFGYFFSTLANWIAAP
                     FNGLLAEQLEARLTGATPPDTGILGIMKDVPRIMKREWQKLAWYLPRAIVLLVLYFIP
                     GIGQTIAPVLWFLFSAWMLAIQYCDYPFDNHKVPFKTMRAALRTQKVANMQFGALTSL
                     FTMIPVLNLFIMPVAVCGATAMWVDCWRAKHALWK"
     gene            7015..>7286
                     /locus_tag="MOX77_003940"
     CDS             7015..>7286
                     /locus_tag="MOX77_003940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZipA"
                     /protein_id="HCA3359341.1"
                     /translation="MMQDLRLILIIVGAIAIIALLVHGFWTSRKERSSMFRDRPLKRM
                     KSKRDDDSYDDDVEEDEGVGEVRVHRVNHAPGQSQEHDAPRQSPQH"
BASE COUNT         1720 a         1875 c         1906 g         1785 t
ORIGIN      
        1 gttcagggga aacgggcgca tcgccgtaga gatgcggcgt gcggctgaga cgggcaaaat
       61 aacggctaag gtcaggcaga cgctgcggat cgggattgcc gccggaaagg tcgtgcagag
      121 gcgtatgcgg atcgccgcct tccaacgcta cgggagacgg actgccttta atcaccgtcc
      181 cattgcggcc taaactttgc gccagtcccg ccgttatcag ccgtttatac gccgctgcga
      241 cggtattgcg gttcaccttt aattcgcttg ccagctcccg taccggcggg agcgaatcct
      301 tcgcccgtaa cgtgccggcg ataatgtgtt gacggatact gtcaaaaatt tcgttagcgg
      361 tttttccgtc gatcattatt gacctatgac aaaatgaatt ttagcatatg acaatgataa
      421 tgaggcggta gcctgctgtc cagcgagagg aaaattttat gggacaagag agtgatattc
      481 agtcagtgct cttcgacgac aaccatcggg cgttacagac cgatatcgtc gccgtccagt
      541 cacaggttgt gtacggcagc gtaggcaaca gtatcgctgt tccggccatt aaagcgcagg
      601 gattacgcgt gacggcggtc ccgacggtgt tgttcagcaa tacgccgcac tataaaacgt
      661 tttatggcgg cattattccc gccgagtggt ttgcaggcta ccttacggcg ttgaatgagc
      721 gcgatgcgct acgtgaatta aaagcgatta ccaccggtta catgggcagc gcagaccaaa
      781 ttgtcttgct ttcgaagtgg ctaatggcga tccgggcttc gcatccggag gtgtgtattc
      841 ttgttgatcc cgtcattggc gataccgaca gtggaatgta tgtgcaggcg gaaattccgc
      901 aggcttatcg cacacatttg ttgccgcagg cgcaggggct aacgccgaac gtatttgagc
      961 tggagatgct gagtggtaaa ccgtgtcgca cgctggaaga ggcggtggcg gcggcgcaat
     1021 cgctgctttc cgatacgctg aaatgggtgg ttatcaccag cgcgccgggc gaatctctgg
     1081 agaccataac ggttgccgtc gttaccgcgc aggtcgtgga ggtctttgcc catccgcggg
     1141 tggcgacgga gttaaaaggg acgggagatc tcttctgcgc cgagctggtc agcggtattg
     1201 tgcagggaaa aaaactgacg accgcggcaa aagatgcggc gcagcgcgtg ctggaggtga
     1261 tgacctggac acagcagtgt ggctgtgatg agttaattct gccgccggca ggggaggcgc
     1321 gatgaagagt tatcggctgg tggttcgcca gcaggggcgt atcgtggggc attttgaaac
     1381 gagcgggctg gacgcgctgg aagatatctg cgtggcgcga gcgatgtttg gcatcactgg
     1441 cggctatcag tgcgagttgc aagtgtccga ttccgaacgc aggatactgg agagtggccc
     1501 ggatgggatg aagatcctga tgcgcgagaa gtgctttcgc ccggtgacct cgcagttgta
     1561 acccgtggat tggcgctgaa atgttcgcaa ccttgtaggc ctgataagcg tagcgccatc
     1621 aggcagtgcg ccgcaccatc gccggatggc ggcgcaagta caggcaaaaa aaatggcgcc
     1681 caaaggcgcc attcttcact gcggcaagaa ttacttctta atgcggataa ccggagtttc
     1741 acccacggtc acgctaccgg acagtttgat cagttctttg atttcatcca tgttggagat
     1801 aacaaccgga gtcagggtag acttggcttt ttcttccagc aacggcagat cgaactcgat
     1861 gaccggatcg ccaactttca cgcgctgacc ttcttcagca atacgcttga agccttcgcc
     1921 tttcagctca acggtgtcga taccgaagtg aacgaacagc tcaatgccgc tatcggattc
     1981 gatagagaac gcatggttgg tttcaaagat tttgccgatg gtaccgtcaa caggggcgac
     2041 cattttgtta ccggttggtt tgatagcgat gccatcacca acgatttttt cagcaaaaac
     2101 tacatccggc acgtcttcga tgttgacgat ctcgccagag agcggggcaa caatctcaat
     2161 agttccggtg tctttcttat catcagaaac cagagatttt agtttatcga acaaacccat
     2221 gatcttctcc taagcagtaa attgggccgc atctcgtgga ttagcagatt gttttttctt
     2281 caatgaactt gttaaccagc gtcattaact cgtccgttgt cggttgagca agagcctgct
     2341 ctgctaacac cttcgcatct tcgaagttcg tgttacggat aatcttctta atgcgcggga
     2401 tagaaatggc gctcatagag aattcgtcca gacccatccc cagcaacaga agtgtagcac
     2461 gttcgtcgcc tgcaagctca ccacacatgc cagtccattt accttctgca tgagaagcat
     2521 caataacttg cttgatcaag ttcagtacgg acggtgacat tggctggtaa aggtgtgaaa
     2581 tcatatcatt accacggtca actgccaggg tgtactgcgt taaatcattg gtgccgatac
     2641 taaagaaatc aacttctttg gctaaatgac gcgcaattgt cgccgcagcc ggtgtttcca
     2701 ccatcacgcc aatctcaatg ctttcgtcaa atgctttacc ttcgtcacgc agttcctgtt
     2761 tgtagatttc aatctctttg cgcagcgcgc gaacttcttc aacagagatg atcatcggga
     2821 acataatgcg caatttaccg aaagcggagg cacgcagaat cgcgcgaacc tggtcacgca
     2881 ggatctcttt gcgatccatg gcgatacgca cggcgcgcca gcccaggaac gggttctctt
     2941 ctttcgggaa gttcatgtat ggcagctctt tgtcgccgcc aatgtccatg gtacggacga
     3001 taaccgcctg cgagccgcac gcttcagcga ccgctttata ggcggcaaac tgctcttctt
     3061 ccgtcggcag cgcgtcgcga tccatgaaca ggaattcagt acgatacaga ccaacgcctt
     3121 ccgcgccgtt acgctcagcg ccttcaacgt cacgaacggt accgatgttg gcgcaaactt
     3181 caacctgatg tccatccagc gtgattgccg gcagatcttt cagttttgcg agttccgctt
     3241 tctcggtcgc aacctgctcc tggacggcgc gcagttgctc aataacatcg ttggtcgggt
     3301 tgacgtaaac ctggttgttt acggcatcca gaatcagata gtcgccgttt ttcacctgag
     3361 cggtgacgct accggtacct acgatcgctg gcagttccag agaacgcgcc atgatggagg
     3421 tatgagacgt gcgtccgccc gcgtcggtga tgaagcccag cactttctgc aggttcagct
     3481 gtgcggtttc tgacggcgtc aggtcagcgg caaccaggat aacttcttcc tgaatcgcgc
     3541 tcagatcgat aatggccaga cccaggatgt tgcgcagcag gcgcttaccg atatcacgta
     3601 cgtcagccgc acgctctttc aggtattcgt catccagttc ttccagggca gtggcctgac
     3661 cttcgataac ttcatgtgcg gctgcgtcag ccgtcatgtg cttatcttta atcagggcta
     3721 tgatttcctg ctccagctcc tcatcttcga gcagcataat atgcccttca aagatggctt
     3781 ctttttcttc accgaacgtt tcaccagctt ttgtcttgat cgcttccagt tgcgcagatg
     3841 ccttggcacg accgctcaga aaacgttcaa cttcctgatc aaccttgtcg gcagaaattt
     3901 ttttccggtc aatgacgatt tcgtcttctt tcagcagcag tgctttgccg aaagcgatac
     3961 ccggggatgc taaaatgcct gaaatcataa ccctacctta cttgtgactg atttttaaaa
     4021 gaacccggaa aaaaacttac tcgagttccg ccatcagttt gaccagatgt tcaaccgctt
     4081 tctgctcatc ttcaccttct gcggagatgg tgacgacggt gccttgagtc aggcccagag
     4141 tctgcagttt aaacaggctt ttcgcgctgg cgcttttgcc gttggaagtc acagtaatct
     4201 cagaagtgaa gccttttgct tctttaacaa actgagcagc agggcgggtg tgcagaccgt
     4261 tcggagcggt aatggtaact tcttgctgga acattgtatt tccccaactt ataggtttag
     4321 tgttgtggaa ctaaagtcta gcctggcggc tcaactttag cctgtattgt tagcgccggc
     4381 gtaaacggga cgcgacacaa aaggtgttct acgcaatccg ttgctggcaa cttatggccg
     4441 ctgacgtttc gctcgtcatt aaacattatg ccgcgaaagg aagagttgaa ccaaatcata
     4501 aaatcgattc agctaacgct tttcctgtaa cgattaattt cgcgcatcaa aataattagt
     4561 ctggttaaat accagttccg gcagggtgaa tcaatgccag gtgaggtgaa agtttgaagc
     4621 aggccacaaa aaagcaccca aaaaggtgct tttttacgcg tttttaacat gctggcatca
     4681 ctgttgcagt tctttctcag taaagagatc ggcgaacaac gcggtgctca gataacgctc
     4741 acctgatgag ggtaggataa ccacaatatt cttattggta aagctttcat cttcctgcag
     4801 cttaagcgct gcagcaaccg cggcgccgga agaaattccc gccagaatac cttcctcttc
     4861 catcagacgg cgcgcggtag aaatggcttc ttcattggtg atgccaacca ctttatcaat
     4921 cagtttcaga tccaggttgc ccgggatgaa gcctgcgccg atgccctgaa ttttatgtgg
     4981 gcccggtttg atctcttcac cagccagcgc ctgggcgata accggggagt cagtgggttc
     5041 taccgcaacg gtgataagat cggttttacc cttcgtccct ttgatataac gcgtgacgcc
     5101 ggttaacgta ccgccagtgc cgacgccgga gataaacaca tccacctgac catcggtgtc
     5161 ttcccagatt tccgggccgg tggttttttc atggatttcc gggttggcag ggttgctgaa
     5221 ctgctggagc aggagatatt tttgcggatc gctggcgaca atttcttcgg ctttctgaat
     5281 agcgcctttc atccctttcg ccccttcggt cagcaccaga ttcgcgccta atgctttgag
     5341 tagcttgcgg cgttcaatgc tcatggtttc cggcatggtc agggtgagtt tgtaaccgcg
     5401 cgcggcggcg acatacgcca gcgcaatacc ggtattgccg ctggtcggct ccaccagttc
     5461 cacgccaggt ttcagtacgc cacgcttttc ggcatcccaa atcatattgg cgccgatacg
     5521 gcacttgacg ctgaagctcg ggttgcgcga ctccaccttc gccagaatgc gtccattacc
     5581 gatacgattc agtcgaacca gcggcgtatg accgatagtc agcgagttat cttcataaat
     5641 cttactcatg gcctgtcctt aactgtatga aattgggata ccttcccagc ataccttcca
     5701 gccagatatg gggaagtaag gatttcgcat atctatatgc tgatggggaa taatggttat
     5761 cagtatggaa taagagacag cataagagcc tatcccatta gggctatttt acttgccatt
     5821 ttggtcttgg gcagtgctcg ccaaaacgca ttagcgtttt gaacgccgct tgcggcggcc
     5881 cgaagggcga gcgtagcgag tcaaacctca cgtactacgt gtacgctccg gtttttgcgc
     5941 gctgtccgtg tccaaactgg ctgcgccaat aacgcttggt gggataggct ctaagccatc
     6001 tcttatttat acatttttac gttatttcca taacgcgtgt ttagcacgcc agcaatcaac
     6061 ccacattgcc gtcgcgccac agacggcgac aggcataatg aaaaggttaa gcaccggaat
     6121 catcgtaaag aggctggtga gcgcgccaaa ttgcatattc gccaccttct gcgtgcgcaa
     6181 cgcggcgcgc atcgttttaa acggcacttt gtggttatca aacgggtagt cgcaatactg
     6241 gatcgccagc atccaggcgc tgaacaaaaa ccacagcacc ggcgcgatgg tttggccaat
     6301 gccaggaata aaatagagaa ccagcagcac aatagcgcgc ggcagatacc acgccagctt
     6361 ttgccattca cgtttcataa tgcgcggtac atctttcatg atgccgagta tgccggtatc
     6421 tggcggcgta gcgccggtta accgcgcctc aagctgttcg gctaaaaggc cgttaaacgg
     6481 cgcggcgatc cagttggcga gggtagagaa aaaatagcca aagaccaaca gaacagagat
     6541 aaccgcaatc ggccacagca gatagctcag ccattgcagc cagtccggca catgactcat
     6601 caacgaaggt atccaggcgt caagctgggt aaacagccac caaaatgcgc cgcccatcag
     6661 cacaatattg accagcaaag gtaaaataac aaagcggcgg attcccggta gggtgactaa
     6721 cttccatcct tgcgagaaat aatagacgcc gctacgtggt acggttgtgg atgatgaaac
     6781 catattcagg acatactcct ttttcttaaa gccctgggta aacgtgggat atcttacccg
     6841 gttatcagac ggtggatagt tcggaaatgt tcgaaaaaac agcaaaaagc acattttcct
     6901 tcatctttat gctgcgaaag ccaacagtac acttgcactt gacgtaatcg gcaaatactc
     6961 ttagtgagta aatgtttgcc gtggtggcaa ggtgttagaa caacagagaa tataatgatg
     7021 caggatttgc gtctgatatt aatcattgtt ggcgcgatcg ccataatcgc tttactggta
     7081 catggtttct ggaccagccg taaagaacga tcttctatgt tccgcgatcg tccactaaaa
     7141 cgcatgaaat cgaaacgcga cgacgactcg tatgacgacg atgtcgaaga agacgaaggc
     7201 gtgggtgaag ttcgtgttca ccgcgtaaat catgcccccg gccagtcgca ggagcatgat
     7261 gcccctcgtc agtcgccgca acacca
//
LOCUS       DAGWFR010000186         7253 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.188, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000186 DAGWFR010000000
VERSION     DAGWFR010000186.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 7253)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7253)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7253
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.188"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            9..733
                     /locus_tag="MOX77_003941"
                     /pseudo
     CDS             9..733
                     /locus_tag="MOX77_003941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001597310.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cobalt-precorrin-6A reductase"
     gene            852..1580
                     /locus_tag="MOX77_003942"
     CDS             852..1580
                     /locus_tag="MOX77_003942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001726449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sirohydrochlorin cobaltochelatase"
                     /protein_id="HCA3359342.1"
                     /translation="MACERDLAESCPDRDLFRAFTSGMIIRKLRQRDGIDIDTPLQAL
                     QKLAAQGYQDVAIQSLHIINGDEYEKIVREVQILRPLFTRLTLGVPLLSSHNDYVQLM
                     QALRQQMPSLRQTEKVVFMGHGASHHAFAAYACLDHMMTAQRFPARVGAVESYPEVDI
                     LIDSLRDEGVTGIHLMPLMLVAGDHAINDMASDDGDSWKMRFNAAGIPATPWLSGLGE
                     NPAIRAMFVAHLHQALNMAVEEAA"
     gene            1577..2290
                     /locus_tag="MOX77_003943"
     CDS             1577..2290
                     /locus_tag="MOX77_003943"
                     /EC_number="2.1.1.151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalt-factor II C(20)-methyltransferase"
                     /protein_id="HCA3359343.1"
                     /translation="MNGKLYALSTGPGAPDLITVRAARILGSLDILYAPAGRKGGDSL
                     ALSIVRDYLGEQTEVRCCHFPMSADGAEKEAVWNEVAAALTAEVEAGKQVGFITLGDA
                     MLFSTWIFLLQRIGCPEWLEIVPGVTSFAAIAARAKMPLAIERQSLAVISCTAPEAEI
                     AQALQQHDSLVLMKVYGRFARIKALLAQAGLLECALMMSEATLPGEQCWRHLHEVNDD
                     RALPYFSTILVNKQWEYAE"
     gene            2287..3023
                     /gene="cbiM"
                     /locus_tag="MOX77_003944"
                     /pseudo
     CDS             2287..3023
                     /gene="cbiM"
                     /locus_tag="MOX77_003944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460968.3"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cobalt ECF transporter S component CbiM"
     gene            3025..3306
                     /locus_tag="MOX77_003945"
     CDS             3025..3306
                     /locus_tag="MOX77_003945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor ABC transporter
                     substrate-binding protein"
                     /protein_id="HCA3359344.1"
                     /translation="MKKTLMLLAMVVALVILPFFINHGGEYGGSDGEAESQIQALAPQ
                     YKPWFQPLYEPASGEIESLLFTLQGSLGAAVIFYILGYCKGKQRRDDRA"
     gene            3293..3970
                     /locus_tag="MOX77_003946"
     CDS             3293..3970
                     /locus_tag="MOX77_003946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor ABC transporter
                     transmembrane protein"
                     /protein_id="HCA3359345.1"
                     /translation="MTGLDRLSYQSRWAHVAPQRKFLLWLAMMILAFVLPPVGQGIEL
                     LIIAGLSCWLLRISLWRWCRWMAIPFGFLLVGVITIIFSISREPQMLLAGISVGPYWI
                     GITRAGVVTANETFWRSLTALSATLWLVMNLPFPQLISLLKRAHIPRLLTEQILLTWR
                     FLFILLDEAVAIRRAQTLRFGYCSLPNGYRSLAMLTGLLFTRVLMRYQQMTTTLDIKL
                     YQGDFHL"
     gene            3979..4794
                     /locus_tag="MOX77_003947"
     CDS             3979..4794
                     /locus_tag="MOX77_003947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor ABC transporter
                     ATP-binding protein"
                     /protein_id="HCA3359346.1"
                     /translation="MLATSDLWFRYQDEPVLKGLNLDFSLSPVTGLVGANGCGKSTLF
                     MNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQIFYTDIDSDIAFS
                     LRNLGVPEAEITRRVDEALTLVDAQHFRHQPIQCLSHGQKKRVAIAGALVLQARYLLL
                     DEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILMHG
                     APGEVFACTEAMEHAGLTQPWLVKLHTQLGLPLCKTETEFFHRMQKCAFREAS"
     gene            4791..6311
                     /locus_tag="MOX77_003948"
     CDS             4791..6311
                     /locus_tag="MOX77_003948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobyric acid synthase"
                     /protein_id="HCA3359347.1"
                     /translation="MTQAVMLQGTASDVGKSVLVAGLCRIFYQDGLRTAPFKSQNMAL
                     NSGITPDGKEMGRAQIFQAEAAGITPDVRMNPVLLKPTSDRQAQVVLMGKVATNMDAV
                     SYHDYKPRLREQILAVYNSLAQEYDVIVLEGAGSPAEINLRDRDIVNMGMAEMAQCPV
                     ILVADIDRGGVFAAIYGTLALLHKQERDRVKGVIINKFRGDVALLYSGIEQIESLTGV
                     PVLGVMPWLDVDLEDEDGVALQNDKYRGNAPRDITIAIVQLPHISNFTDFNALAAQPD
                     VRIRYIRRPEALTDADLVILPGSKNTLSDLAWLRESGMADAVLQTHRQGVPVMGICGG
                     YQMLGDTIVDEVESGLGTQPGLGLLNTITRFAQDKTTTQVNATMSGELPGWLAAAAGL
                     PVRGYEIHMGETVLQEGCCTAMTLQKNGCSVADGAVTADGLAFGTYLHGLFDSDAFTR
                     AVVNGLRARKGLAPWETTFCYAEHKARQFDLLAEAMRQHIDIDKIYTIMQQHQEPV"
     gene            6308..6853
                     /gene="cobU"
                     /locus_tag="MOX77_003949"
     CDS             6308..6853
                     /gene="cobU"
                     /locus_tag="MOX77_003949"
                     /EC_number="2.7.1.156"
                     /EC_number="2.7.7.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional adenosylcobinamide
                     kinase/adenosylcobinamide-phosphate guanylyltransferase"
                     /protein_id="HCA3359348.1"
                     /translation="MMILVTGGARSGKSRHAEALISDAPQVLYIATSQILDDEMAARI
                     QHHKDGRPAHWRTAECWRHLDTLITADLAPDDAILLECITTMVTNLLFALGGENDPEQ
                     WDYAAMERAIDDEIQILIAACQRCPAKVVLVTNEVGMGIVPENRLARHFRDIAGRVNQ
                     RLAAAADEVWLVVSGIGVKIK"
     gene            6850..>7253
                     /gene="cobS"
                     /locus_tag="MOX77_003950"
     CDS             6850..>7253
                     /gene="cobS"
                     /locus_tag="MOX77_003950"
                     /EC_number="2.7.8.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylcobinamide-GDP ribazoletransferase"
                     /protein_id="HCA3359349.1"
                     /translation="MSKLFWAMLAFISRLPVPSRWSQGLDFEQYSRGIVMFPFIGLIL
                     GGISGLIFILLQPWCGIPLAALFCILALALLTGGFHLDGLADTCDGIFSARRRERMLE
                     IMRDSRLGTHGGLALIFVLLAKILVVSELALRG"
BASE COUNT         1476 a         1767 c         2253 g         1757 t
ORIGIN      
        1 agggggaggt gctggtggtg ggcggcacca gcgatgcgcg cgcgttatgc cgacaactgg
       61 gtgcggcgaa cgtcgcgtac accttatctg tggcgacgcc agccggaaaa gcgctggctg
      121 gcgacattaa aggacaggtg cgctgtggtc gtctggagta cgggcagatg gtcgcatggc
      181 taaaagaaaa ccgtactcgc tgggtaatag atgcgtcgca tccttatgca gaaatggtca
      241 gccataacct ccttcgcgcc tgtgaaacgg cggacgtgtt gttaagtcgt tatcagcgtc
      301 cggagcagct tagcaatctg acgcatccgc ttctctatac ggcgcgcagt attgccgatg
      361 cctgcgagat agcgaggcgt tttggtccgc gcgtgttact gacgaccggc agtaaagatc
      421 tggccgtctg gcgtgccggg ctggcggaaa aaacgttgct ggcgcgcgta ctgcccgtgg
      481 cggaggtgat tcaacgctgc agcgaactgg ggttcggcgt tggagaaatt ttcgcactgt
      541 gtgggccgtt cagcgctgat tttaacgccg cgttttaccg ccagtgccgg gctgacgtgg
      601 tcattaccaa agcgtccggc gcggaggggg atatcaggaa aaagttcagc cctgtctgga
      661 tgcgggcatt ccctgcatcg ttattgcgcg cccgacgccg ctcgtgacgg gtgatgagtt
      721 actggaaagc taggccgcct ttgcgcagcg tttatcgcgc tggctggccg cagctaagga
      781 gtaaaaatga aaaaagcgct tctggtggtc agttttggca ccagctatca cgacacctgt
      841 gaaaaaacat tgtggcgtgc gaacgtgatc tggcggagtc ctgtcccgat cgcgacctgt
      901 ttcgcgcctt cacttccgga atgatcattc gcaagcttcg ccagcgtgac ggtatcgaca
      961 tcgatacgcc attacaggct ttgcaaaagc ttgcagcaca gggatatcag gacgtggcga
     1021 ttcagtcgtt gcacattatt aacggcgacg aatatgaaaa aattgtccgt gaagtacaaa
     1081 tcttgcgtcc gttatttact cgcctgacgc tgggcgtgcc gctgctgagc agccataacg
     1141 attatgtgca gctaatgcag gcgttgcgac aacagatgcc atcgctcaga caaacggaga
     1201 aagtcgtttt tatgggccac ggcgccagcc atcatgcatt cgcagcttat gcctgcctcg
     1261 atcatatgat gaccgcgcag cgcttcccgg cgcgcgtcgg cgctgtagaa agctacccgg
     1321 aggtcgacat cctgatcgac agcctgcgtg acgaaggcgt caccggcata catttgatgc
     1381 cattaatgct ggtggcgggc gatcacgcca taaatgatat ggcttcagac gacggcgact
     1441 catggaaaat gcgctttaac gcggcgggca ttccggcgac gccgtggctg agcgggctgg
     1501 gagaaaaccc ggctatccgg gcgatgtttg tcgcgcattt gcaccaggcg ctgaacatgg
     1561 cggtagagga ggcggcatga acggtaaatt atacgcatta agtaccgggc caggcgcgcc
     1621 cgacctgata accgtccgcg cagcgcggat tcttggctcg ctggacattc tgtatgcgcc
     1681 cgccggtcgt aaggggggcg atagtctggc gttgtcgatt gtgcgcgact atctcggcga
     1741 gcagacggaa gtacgttgtt gccatttccc tatgagcgct gacggcgccg agaaagaagc
     1801 ggtctggaac gaggttgccg ccgcgcttac cgcagaggtg gaagcgggta aacaggtcgg
     1861 ttttattacc ctgggcgatg cgatgctatt cagtacctgg atttttttac tccagagaat
     1921 cggctgcccg gagtggctgg agattgtccc cggcgtcacg tccttcgccg cgatagccgc
     1981 ccgcgcgaaa atgccgctcg ccatagaacg gcaatcgctg gcggttattt cttgtaccgc
     2041 gccggaagcg gaaatagccc aggcgctaca acagcatgat agcctggtgt tgatgaaagt
     2101 gtatggccga ttcgcccgta ttaaagcgtt gctggcgcag gctggcctgc tggaatgcgc
     2161 cttaatgatg tccgaggcca cgctgcccgg cgagcagtgc tggcgccacc tccacgaggt
     2221 caacgatgat cgagcgttgc cctatttttc gaccattctg gtcaataaac agtgggagta
     2281 tgcagaatga aacttgaaca gcagcttaga cagttgtctt tcagtggact ggctgcagcg
     2341 ctattgctga tggttgtccc gcaacaggcg tttgcgatgc atatcatgga gggcttttta
     2401 ccgccagtgt gggcgctggc ctggtggtta ctgtttttac cctgcttgtg gtatgggctg
     2461 gtacgcttac ggcgtattgt gcaggaggat aatcatcaga aggtactgct ggcgctgtgc
     2521 ggcgcgttta tttttgtcct gtcccgctca aaattccgtc ggtaacgggg agttgttcac
     2581 atccgaccgg cgttggtctg gcggttatct tgttcgggcc tggggtggtg gcgattctcg
     2641 gcgcggttgt gctgttgttt caggcgctat tgctggcgca cggcggcctg acgacgcttg
     2701 gcgcaaacgg aatgtcgatg gcggtgattg gcccggttgt cggttatctg gtgtggaaaa
     2761 tggcctgccg tgccggactg cgccgcgatg tcgccgtttt tctgtgcgcg atgctggcgg
     2821 atttggcaac ctattttgtg acttcagtcc agcttggcgt tgcgtttccc gatccccatg
     2881 ccggagcgac agggtctgtt gtgaagttta tggggatttt ctgcctcaca cagattcctg
     2941 tcgctattgc tgaaggttta ttaaccgtca tgatttatga ccagttaacc aaacggcaag
     3001 tgattaccgt acaaggacat taaaatgaaa aaaacgttga tgttgttagc gatggtggtg
     3061 gcgctggtga ttctgccgtt ttttattaac catggcggtg aatatggcgg ttcagacggc
     3121 gaagcggaaa gccagattca ggctcttgcg ccgcagtata aaccttggtt tcagccgtta
     3181 tatgaacccg ccagcggtga aattgaaagc ctgctgttta cccttcaggg ctctcttggc
     3241 gcggcggtga ttttttatat cctggggtat tgcaaaggta aacaacgccg tgatgaccgg
     3301 gcttgatcga ctcagctatc aaagccgctg ggcacacgtt gcgccgcagc gcaagttttt
     3361 gctgtggctg gcgatgatga tactggcgtt tgttctgccg cctgtagggc agggcattga
     3421 gctgctgatc attgccggat tgagctgttg gctattgcgc atatccctct ggcgttggtg
     3481 tcgatggatg gcgatacctt ttggattttt gttggtcggc gtgataacga ttatcttcag
     3541 catcagccgc gagccgcaaa tgctgctggc tggcatatct gttgggccgt actggatcgg
     3601 gattacccgt gcgggcgtgg ttacggcgaa tgaaacgttc tggcgtagcc tgacggcgct
     3661 gtccgcgacg ttgtggctgg tgatgaacct accgtttccg cagttaatta gcttgcttaa
     3721 gcgcgcgcat attccacgcc tgcttaccga gcaaatcctg ttaacgtggc gctttctctt
     3781 tattcttctg gatgaggcgg tggcaatccg tcgtgcgcaa acgctgcgtt ttggttattg
     3841 cagcctgccg aacggctatc gatctctggc aatgctgact ggactcctgt ttacgcgggt
     3901 gttaatgcgt tatcagcaaa tgaccaccac gctggatatc aaactgtatc agggtgattt
     3961 tcacctgtaa ggactattat gcttgccact tcagacctgt ggtttcgtta tcaggatgag
     4021 ccggtactta aagggttaaa tctggatttt tcgctctcgc ctgttaccgg tttggtgggc
     4081 gcgaacggtt gtgggaagtc tacgcttttt atgaacctga gcggcctgtt gcgtccgcaa
     4141 aaaggggccg tattgtggca gggaaaaccg ttggattaca gcaagcgcgg actactggcg
     4201 ctgcgccagc aagttgcgac ggtttttcag gaccctgaac agcagatttt ttatactgat
     4261 atcgatagcg acattgcgtt tagtttacgt aatttgggtg tgccggaggc ggaaatcacg
     4321 cgccgcgtcg acgaggcgct aacgctggtt gacgcccaac attttcgcca tcagcccatt
     4381 cagtgtttga gtcatggaca aaaaaaacgt gtggctatcg ccggagcgct ggtgctacag
     4441 gcgcgctatc tattgctgga tgaacccact gctggtcttg atcccgcagg gcgcactcag
     4501 atgattgcta tcatcaggcg gattgtggcg cagggaaatc atgtcattat ctccagccat
     4561 gatatcgatc ttatttatga aattagcgat gccgtatacg tgttacgcca gggccagatc
     4621 ctgatgcatg gcgcgcctgg cgaggttttc gcgtgtacgg aagcgatgga acacgcgggg
     4681 ctaacccagc cctggctggt caaacttcat actcaactgg gactgccgct gtgtaaaaca
     4741 gaaacggagt tttttcatcg aatgcaaaag tgcgcattca gggaggcgtc atgacgcagg
     4801 cagttatgtt gcaggggacg gcatccgacg tcggcaaaag tgtgctggtg gccggtttat
     4861 gccgcatttt ttatcaggat ggtctgcgta ccgcgccgtt taaatcgcaa aatatggcgc
     4921 ttaattctgg tattacgccg gatggtaaag agatggggcg ggcgcagatt tttcaggcgg
     4981 aagccgcggg gatcacgcca gatgtgcgta tgaatccggt gctgctcaaa ccgaccagcg
     5041 atcgccaggc gcaggtcgtg ctgatgggga aagtggcgac caatatggat gcggtgagtt
     5101 accatgacta taaaccgcgt ttgcgtgagc aaatccttgc ggtctataac agcctggcgc
     5161 aggaatatga cgttattgtg ctggaaggcg ccggaagccc ggcggaaatc aatctgcgcg
     5221 atcgcgatat cgtcaatatg ggaatggcgg aaatggccca gtgtccggtt attctggtgg
     5281 cggatatcga ccggggcggc gtattcgccg ctatttatgg cacgctggcg ctactgcaca
     5341 aacaggagcg tgacagagta aagggcgtca ttatcaacaa attccgcggc gacgtggcgc
     5401 tactctattc cggtatcgaa caaatcgaat cgcttaccgg cgtcccggtt ctgggagtga
     5461 tgccatggct ggatgtggat ctggaagatg aagatggcgt cgcgctgcaa aacgataaat
     5521 atcgcggtaa cgccccccgt gatatcacta ttgccattgt gcaactgcca catatttcta
     5581 actttacgga ttttaacgct ctggcggcgc agccggatgt gcgcatacgc tatattcgcc
     5641 gcccggaagc gttgactgac gctgatctgg tgatcctgcc gggcagtaag aatacgctga
     5701 gcgacctcgc ctggctgcgc gaaagcggga tggcggatgc ggtattgcag acacatcggc
     5761 agggcgtgcc ggtgatggga atttgcggtg gctaccagat gctgggcgac actattgtgg
     5821 atgaggtgga gtcggggctg ggtacgcagc cgggcctggg actgcttaat acgatcactc
     5881 gctttgcaca ggataaaacc acgacgcagg ttaacgcgac aatgtcaggc gagctgcccg
     5941 gctggctggc tgccgcggcg gggctaccgg tacgcggtta tgaaatccac atgggggaaa
     6001 cggtgctgca ggaaggatgc tgtacggcca tgacgttaca gaaaaatgga tgctctgtgg
     6061 cggatggcgc ggtcaccgcc gacggactgg cgtttggcac ttaccttcac ggtctgtttg
     6121 acagcgatgc ctttacccgt gcggtggtca atgggttacg ggcgcgaaaa gggcttgcgc
     6181 cgtgggaaac gactttttgt tatgcggagc ataaagcgcg gcaatttgat ctgctggcgg
     6241 aagcgatgcg gcaacatatt gatattgata aaatttacac catcatgcaa cagcatcagg
     6301 agccggtatg atgattctgg tgacgggcgg ggcgcgtagt ggtaaaagcc gtcatgctga
     6361 agccttaatt agcgatgcgc cgcaggtact gtatatcgcc acctcgcaga ttcttgatga
     6421 cgagatggcg gcgagaattc agcatcataa agatggcagg ccggcacact ggcggaccgc
     6481 agaatgctgg cggcatcttg atacgttgat taccgcggat cttgcccctg acgacgcgat
     6541 tttgctggaa tgtattacca ccatggtgac gaatctgctg tttgcgctgg gaggcgaaaa
     6601 cgatcccgaa cagtgggatt acgcggcgat ggagcgcgcc attgacgatg aaattcagat
     6661 tttaattgca gcctgccagc gctgcccggc gaaagtggta ctggtgacaa atgaagtggg
     6721 aatggggatc gtcccggaaa accgcctggc gcgccatttt cgtgatattg ccggtcgggt
     6781 caaccaacga ctggcggcag cggcggatga ggtctggctg gtggtctcag gtattggagt
     6841 caaaattaaa tgagtaagct gttttgggcc atgctcgctt ttattagccg cttgcccgtg
     6901 ccgtcacgct ggtcgcaggg actggatttc gagcagtatt cgcgtgggat cgtgatgttt
     6961 ccctttatcg ggttgattct gggggggatt agcggcctga ttttcatcct cctgcaaccc
     7021 tggtgcggta ttccgctcgc ggcgttgttc tgtattttgg cgctggcgct gctgaccggt
     7081 ggttttcacc tggatgggct ggccgatacc tgcgatggca ttttttccgc gcgccgccgc
     7141 gagcgaatgc tggagattat gcgcgatagt cgtctgggaa cccatggcgg gctggcgctt
     7201 atttttgtgc tactggcaaa aattctggtg gtcagcgaac tggcgttacg tgg
//
LOCUS       DAGWFR010000187         7251 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.189, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000187 DAGWFR010000000
VERSION     DAGWFR010000187.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 7251)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7251)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7251
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.189"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..1075
                     /locus_tag="MOX77_003951"
     CDS             <1..1075
                     /locus_tag="MOX77_003951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308179.2"
                     /note="similar in sequence to the ATP-dependent RNA
                     helicase HrpA; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-dependent RNA helicase HrpB"
                     /protein_id="HCA3359350.1"
                     /translation="DLSVLFSRRQPGWQQRSQQLLKRLQVRNGEPDSALIMPLLARAF
                     SDRIARRRGQEGRYQLANGMGAMLDADDALGRHEWLIAPLLLQGSASPDARILLAQPL
                     DIASLIQACPDLLRQSDTVEWDEAQGTLKAWRRMRIGQLTVSVQPLAKPSEEELHQAM
                     LNGIRDKGLSVLNWTPEAEQFRLRLHCAAKWLPEYDWPAVDEASLLATLENWLLPHMT
                     GVQSLRSLKSLNVTQALRGLLDYAMLQRLDSELPGHYTVPTGSRITIRYHEDNPPALA
                     VRMQEMFGEASTPTLAQGRVPLVLELLSPAQRPLQITRDLSAFWQGAYREVQKEMKGR
                     YPKHVWPDDPANTAPTRRTKKYS"
     gene            1216..3738
                     /gene="mrcB"
                     /locus_tag="MOX77_003952"
     CDS             1216..3738
                     /gene="mrcB"
                     /locus_tag="MOX77_003952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glycosyl
                     transferase/transpeptidase"
                     /protein_id="HCA3359351.1"
                     /translation="MAGNDREPIGRKGKPSRPVKQKVSRRRQHDDDYDDDYEDEEPMP
                     RKGKGKGRKPRGKRGWLWLLLKLFIVFVVLFAIYGVYLDQKIRSRIDGKVWQLPAAVY
                     GRMVNLEPDMPVSKNEMVKLLEATQYRLVTKMTRPGEFTVQANSIEMIRRPFDFPDSK
                     EGQVRARLTFSDGRLETIVNLDNNRQFGFFRLDPRLITMLSSPNGEQRLFVPRSGFPD
                     LLVDTLLATEDRRFYEHDGISLYSIGRAVLANLTAGRTVQGASTLTQQLVKNLFLSSE
                     RSYWRKANEAYMALIMDARYSKDRILELYMNEVYLGQSGDNEIRGFPLASLYYFGRPV
                     EELSLDQQALLVGMVKGASIYNPWRNPKLALERRNLVLRLLQQQKIIDQELYDMLSAR
                     PLGVQPRGGVISPQPAFMQMVRQELQAKLGDKIKDLSGVKIFTTFDSVAQDAAEKAVV
                     EGIPALKKQRKLSDLETAMVVVDRFSGEVRAMVGGAEPQYAGYNRAMQARRSIGSLAK
                     PATYLTALSQPNLYRLNTWIADAPISLRQPNGQVWSPENDDRRYSESGKVMLVDALTR
                     SMNVPTVNLGMALGLPAVTDTWTKLGVPKDQLNPVPAMLLGALNLTPIEVAQAFQTIA
                     SGGNRAPLSALRSVIAEDGKVLYQSYPQAERAVPAQAAYLTLWTMQQVVQRGTGRQLG
                     AKYPGLHLVGKTGTTNNNVDTWFAGIDGSQVTITWVGRDNNQPTKLYGASGAMAIYQR
                     YLANQTPTPLVLTPPEDVVDMGVDYDGNFVCNGGMRTLPVWTDDPNTLCQQGEMMQQQ
                     QQPSGNPFDQSSQPQQPAQQQPPKEEKSDGVAGWIKEMFGGN"
     gene            4031..6222
                     /gene="fhuA"
                     /locus_tag="MOX77_003953"
                     /pseudo
     CDS             4031..6222
                     /gene="fhuA"
                     /locus_tag="MOX77_003953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459196.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ferrichrome porin FhuA"
     gene            6271..7068
                     /gene="fhuC"
                     /locus_tag="MOX77_003954"
     CDS             6271..7068
                     /gene="fhuC"
                     /locus_tag="MOX77_003954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe3+-hydroxamate ABC transporter ATP-binding
                     protein FhuC"
                     /protein_id="HCA3359352.1"
                     /translation="MQENHIHSDTTFALRSVAFRVPGRTLLHPLSLTFPAGRVTGLIG
                     HNGSGKSTLLKMLGRHQLPSEGDILLDNQPLASWSSKAFARKVAYLPQQLPQAEGMTV
                     RELVAIGRYPWHGALGRFGVADREKVDEAITLVGLKPLAHRLVDSLSGGERQRAWIAM
                     LVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQQRGLTVVAVLHDINMAARYCDYL
                     VALRGGEMIAQGTPAELMRSDTLEQIYGIPMGILPHPAGAAPVSFVY"
     gene            7068..>7251
                     /locus_tag="MOX77_003955"
     CDS             7068..>7251
                     /locus_tag="MOX77_003955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459198.1"
                     /note="Part of the FhuBCD ATP-dependent iron (III)
                     hydroxamate transporter; binds to all hydroxamate
                     siderophores; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+)-hydroxamate ABC transporter
                     substrate-binding protein FhuD"
                     /protein_id="HCA3359353.1"
                     /translation="MRELYPLTRRRLLTAMALSPLLWQMNTAQAAAIDPRRIVALEWL
                     PVELLLALGITPYGVAD"
BASE COUNT         1647 a         1828 c         2135 g         1641 t
ORIGIN      
        1 ggatttaagc gtgctatttt cgcggcgaca gccgggctgg cagcagcgta gccagcagct
       61 tttaaaacgg ctgcaggtgc gtaatggcga gccggatagc gcgcttatta tgccgctgtt
      121 ggccagagcg tttagcgacc gcatcgcgcg gcgtcgcggt caggaagggc gctatcagtt
      181 agccaatggt atgggcgcga tgttagatgc ggatgacgcg ttgggacgtc atgaatggct
      241 gatcgcgccg ctgttactgc aaggtagcgc ctcgccggac gcccgaatat tgttggcgca
      301 gccgctggat attgcctcgc tgattcaggc gtgtcctgat ttactgcgcc agtccgacac
      361 ggttgaatgg gacgaggcgc agggaacgtt gaaagcatgg cgcagaatgc gtattggaca
      421 gttgacggtt agcgttcagc cactggcgaa gccgtctgaa gaggagcttc atcaggcgat
      481 gctgaacggc atccgcgata aaggtctgtc cgtccttaac tggacgccgg aagcggagca
      541 gttccgtctg cgtctgcact gtgcggcgaa atggctgccg gaatatgact ggcctgccgt
      601 ggatgaggcg tcgctgctgg cgactctgga aaattggttg ctgccgcaca tgacaggcgt
      661 acagtcgtta cggagtctga aatctctgaa tgtgactcag gcgttacggg gactgcttga
      721 ctatgccatg ctgcaacgtc tggatagtga actgcctggg cattacactg tgccgacggg
      781 aagccgaata acgattcgtt atcatgaaga taacccgccc gcgctggcgg tcagaatgca
      841 ggaaatgttc ggcgaggcaa gtacgccgac acttgcgcag gggcgagtgc cgctggtgct
      901 ggaactgctt tcgccagcgc agcgaccgct acagattacg cgcgatttaa gcgctttctg
      961 gcagggggcg tatcgcgaag tgcaaaaaga gatgaagggg cgttacccca aacatgtctg
     1021 gccggacgat ccggcgaata cggctccaac gcggcgcacg aagaagtatt cgtgacgtgt
     1081 tatacgttgc ctccaggccg gataaggcgt taatcgccat ccggcaaaaa ggtaaattga
     1141 gagatttctt cttctgtcgt ctggcggaag aatagagaat cgggcctttg cgcctgtatg
     1201 ttgcggagaa aaagcatggc ggggaatgac cgcgagccga ttggacgtaa ggggaaaccg
     1261 tcacgtcctg tgaaacaaaa ggtgagccgt cgtcggcagc atgacgacga ttatgatgat
     1321 gactatgagg atgaagaacc gatgccgcgt aaaggtaagg gcaaagggcg taagcctcgt
     1381 ggcaagcgcg gctggctgtg gctattgcta aaactgttta tcgtttttgt ggtgctgttc
     1441 gccatttacg gcgtctatct ggatcaaaaa atccgcagcc gtattgatgg caaggtctgg
     1501 cagcttccgg cggcggtata tggccggatg gtgaaccttg agccagacat gcctgtcagc
     1561 aaaaacgaga tggtgaaatt gctggaagcg acgcagtatc gtctggtgac gaagatgacc
     1621 cgtcccggcg aatttaccgt gcaggccaat agcattgaga tgatccgtcg tccgtttgac
     1681 ttcccggaca gcaaagaagg gcaggtgcgc gcgcggctga cgttcagtga cgggcgtctg
     1741 gaaaccatcg tcaatctgga taacaaccgc cagtttggct tcttccgcct cgatccgcgg
     1801 cttatcacca tgctttcttc gccaaatggc gagcagcgtt tattcgtccc gcgcagcggt
     1861 ttcccggatc tgctggtcga tacgctgttg gcgacggaag accgtcgttt ctatgagcat
     1921 gatggcatta gtctttactc tatcgggcgt gcggtgctgg ccaacctgac ggcgggacgc
     1981 acggtgcagg gggccagtac gctgacccag cagctggtga agaacctgtt cctctccagc
     2041 gaaagatcat actggcgtaa agcgaatgaa gcctacatgg cgctgatcat ggatgcccgt
     2101 tacagtaaag atcgtattct tgagctgtac atgaacgagg tctacctcgg tcaaagcggg
     2161 gataatgaaa ttcgcggttt tccgctggcg agcctgtatt actttggtcg tccggtagag
     2221 gaactgagcc tcgatcagca ggcgttactg gtggggatgg taaaaggggc gtcgatttat
     2281 aacccgtggc gtaacccgaa actggcgctg gagcgtcgta acctagtgtt acgcctgtta
     2341 cagcagcaga aaatcatcga tcaggaactc tatgacatgc tgagcgcgcg tccgcttggc
     2401 gtacagccgc gcggcggcgt tatttcaccg cagccagcgt ttatgcagat ggttcgtcag
     2461 gaactgcagg cgaagctggg ggataaaatt aaagatctct ccggcgtgaa gatcttcacc
     2521 acctttgact ccgtggcgca ggatgccgca gaaaaagccg ttgtcgaagg cattccggcg
     2581 ttgaagaagc agcgtaaatt gagcgatctg gaaactgcga tggtggtagt ggatcgcttt
     2641 agcggcgagg tacgcgcgat ggttggcggg gcggagccgc agtatgctgg ctataaccgt
     2701 gccatgcagg cacgccgttc catcgggtcg ctggcgaaac cggcgaccta tctgaccgcg
     2761 ttaagtcagc cgaacttata ccgtctgaac acctggattg ccgatgcgcc gatttctctg
     2821 cgccagccga atggtcaggt ctggtcgccg gagaacgacg atcgtcgcta cagcgaaagc
     2881 gggaaagtga tgctggtgga tgcgttaact cgttcaatga acgtaccgac ggtcaatctg
     2941 gggatggcgt taggtttacc ggcggtaacc gatacctgga cgaagctcgg cgtgccgaaa
     3001 gatcagctca atccggttcc ggcgatgctg ttaggggcgc tgaacctgac gccgatcgaa
     3061 gtggcgcaag cgttccagac tatcgccagc ggcggaaatc gcgcgccgtt atcagcgctg
     3121 cgttcggtta ttgcggaaga tggtaaagtg ctgtaccaaa gttatccgca agctgaacgc
     3181 gccgtaccgg cacaggcggc ttacctgacg ctctggacaa tgcagcaggt cgtccagcgt
     3241 ggtacggggc gtcagcttgg cgcgaaatat ccgggtctgc atctggtggg taaaaccggg
     3301 acgacaaaca acaatgtcga tacctggttt gccggtatcg acggcagcca ggtgactatc
     3361 acctgggtag gccgtgataa caaccagcca acgaaattgt acggtgccag cggcgcgatg
     3421 gcgatttacc agcgctatct ggcgaaccag acgccgacgc ctttagttct gacgccgccg
     3481 gaagatgtgg tggatatggg cgttgattac gacggtaatt ttgtctgtaa cggcggtatg
     3541 cgcactctgc cggtctggac ggacgatcca aatacgctgt gccagcaggg cgagatgatg
     3601 cagcagcaac agcagccgtc aggcaatccg ttcgatcagt cgtctcagcc gcagcagcct
     3661 gcgcagcaac agccgccgaa agaagagaag agcgacggcg ttgccggctg gattaaggag
     3721 atgtttggcg gcaattaatc acggtaatag tgccgggtgg cgctgtgctt actcggtcca
     3781 caccgttacg accccattat gtgcgacgta ggccgaataa gacgcttaca tcgccatccg
     3841 gcaaatcctc cataaataac atttcagtct aatttattaa cccttccttt tcatctggtt
     3901 gtttcttaac cccttagttt tcgtagggcc gcgtatcgct tgccattgcg acgatatttc
     3961 gcctatcatg ctgcggttat aataataatt atcgtttacg ttatcattca ctttcatcag
     4021 agatatacca atggcgcgtc ttaaaattgc tcagccaaac tcctcactgc gtaaaatcgc
     4081 agttgtagta gccacagcgg ttagcggcat gtctgtctat gcacaggcgg cggttcaacc
     4141 gaaagaagaa accattaccg taaccgcagc gcctgcgccg caggaaagtg cctggggacc
     4201 ggctccgacc atcgccgcga agcgttccgc cactaccacc aaaactgata catctatcga
     4261 aaaaacgcca cagtcggttt cggtggtcac taacgaagag atgcagatgc atcaattcca
     4321 gtcagtaaaa gaagcgttgg gttacacgcc gggcgtaact gtaagcagtc gcggcgcttc
     4381 caatacctat gacttcgtga ttatccgtgg cttctcttcc gtcggcctga gccagaataa
     4441 ctatctctgg atggcctgaa attgcagggt aacttctaca acgatgcggt tattgatcca
     4501 tccctgcttg agcgtgttga gttgatgcgt ggcccaacgt ccgttctcta tggtaagagc
     4561 aacccgggcg gtatcatttc gatggttagc aagcggccga ctactgagcc gctgaaagaa
     4621 attcaattca aaatggggac ggacaatttg ttccagaccg gttttgattt tagtgattcc
     4681 ctggatgaca acggtgagtt ctcatatcgt ctgacggggc tggcgcgctc gacaaatgag
     4741 cagcaaaaga gttctgagtc gcagcgctat gcgattgcgc cctcttttac ctggcgtcct
     4801 gatgagaaaa cgaattttac gttcctttct tatttccaga acgaaccaga gactggctac
     4861 tacggctggc tgccgaaaga gggaacggtt gaaccgttac cgaatggtaa acgcttgcca
     4921 acagatttca atgaaggggc gtcaaacaac acctattctc gtaacgagaa aatggtggga
     4981 tacagtttcg agcatggctt caacgacact tttaccgtgc gccagaattt acgttttgtc
     5041 gaaatgaaaa ccgcgcaaaa aagcgtctat ggcacgggga ttgcggcgga cggccatacg
     5101 cttaaccgcg gtactatcgt tgacaacgag cgtttacaga atttcagcgt agatacacaa
     5161 ctggaaagta aattcgcgac cggcgatatt gatcatacgt tgctgacggg tgtcgatttc
     5221 atgcgtatgc gtaatgatat taacgcgacg tttggtagcg cgccgtcaat cgatctctat
     5281 aacaattacc atcctgaata ctttgctttc ggcggcgctg agccgtacca gatgaacgaa
     5341 agtaaacaaa cagccttata tgttcaggat caggcggaat ggaataagtg ggtatttact
     5401 ctcggcggcc gttatgactg gtctaaacaa gcgataacgg tgcgtcagaa ttccactacg
     5461 ccgacagaag gatatattga acgtaatgac caccagttca cctggcgcgg tggcgtaaac
     5521 tacgtattcg ataatggaat ttcaccttac ttcagctata gccaatcttt cgagccaagc
     5581 gccttcgatt tgtggagcac cccacgtgtt tcttacaagc cgtcaaaagg cgagcaatat
     5641 gaagcagggg tgaaatatgt accgaaagac atgccagttg ttgttacggg tgccgtttat
     5701 cagctgacca aaaccaataa cctgaccgcc gatccaacca acccattagc gcaggtgccg
     5761 gcaggcgaaa ttcgtgcgcg aggtgtagag ctggaagcca aagcagcatt gacggctaat
     5821 atcaatatga cggcgtctta cacttatact gatgctgaat acacgaaaga cactaacctg
     5881 aaagggaata cgccagagca ggtgcctgaa cacatggcgt cgttgtgggg cgattacacc
     5941 ttcaacgatg gtccgttgtc aggtttaacg ctgggaacag gcggtcgttt tattggttcc
     6001 agttacggcg atccggccaa tagcttcaag gtaggcagcg cagcggtgat ggatgcggtc
     6061 gtcaagtacg atctggcgcg ttttggtatg gcgggctcca gcattgcggt taacgttaat
     6121 aatctgctcg accgcgaata cgtcgccagc tgcttccaga cctacggctg tttctggggc
     6181 gcagaacgtc aggtcgttgc aacggcaacc ttccgtttct aatttctttt tgggcacggc
     6241 ttgccgtgcc cgttttacaa gttggctgcg atgcaggaaa accacattca ttccgatacc
     6301 acctttgcgc tgcgaagcgt cgcttttcgt gtgccgggcc gcacgctttt acaccccctc
     6361 tcgttaacgt ttcccgcagg tcgagtcacc ggacttatcg gccataatgg ttccggtaaa
     6421 tccacgctgt taaaaatgct gggccgccat cagctgcctt ccgaagggga tattctgctc
     6481 gacaatcagc cgctggcgag ctggagcagc aaggcgtttg cccgcaaagt tgcctatctg
     6541 cctcaacaat tgccgcaggc ggaaggaatg acggtgcgcg aactggtggc gattggccgc
     6601 tatccgtggc acggcgcgtt gggacgcttt ggcgtcgcgg accgggaaaa agtagacgag
     6661 gcgattacgc tggtcggctt aaaaccgctg gcgcatcgtc tggtcgatag cctgtccggc
     6721 ggtgaacgcc agcgcgcgtg gattgccatg ctggtcgcgc aggacagccg ttgtctgctg
     6781 ctggatgagc cgacgtcagc gctggatatc gcccatcagg ttgacgtgct ggcgctggtg
     6841 catcgtttaa gccaacagcg cgggctgacg gtggttgcgg tgctgcacga tatcaacatg
     6901 gcggcccgct actgtgatta tttagtagcg ctacgcggcg gtgaaatgat tgcgcaagga
     6961 acgcctgcgg aactgatgcg cagtgacacg ctggaacaga tttacggtat cccgatgggt
     7021 atccttccgc atccggcggg cgccgcgcct gtgagttttg tgtattaatg cgtgagttat
     7081 atcctcttac tcgccgccgt ttattaacgg cgatggcgct ctcgccgctg ctgtggcaaa
     7141 tgaatacggc gcaggctgcc gctatcgatc cccgccggat tgtggcgctg gagtggctgc
     7201 cggttgagct gctgctggcg ctcggtatta cgccttatgg tgtggcggac g
//
LOCUS       DAGWFR010000188         7221 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.191, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000188 DAGWFR010000000
VERSION     DAGWFR010000188.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 7221)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7221)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7221
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.191"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            60..548
                     /gene="mreD"
                     /locus_tag="MOX77_003956"
     CDS             60..548
                     /gene="mreD"
                     /locus_tag="MOX77_003956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001487551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreD"
                     /protein_id="HCA3359354.1"
                     /translation="MASYRSQGRWVIWLSFLIALLLQIMPWPDDIIVFRPNWVLLILL
                     YWILALPHRVNVGTGFVMGAILDLISGSTLGVRALSMSIVAYLVALKFQLFRNLALWQ
                     QALVVMLLSLAVDIIVFWAEFLVINVSFRPEVFWSSVVNGVLWPWLFLLMRKVRQQFA
                     VQ"
     gene            557..1150
                     /gene="maf"
                     /locus_tag="MOX77_003957"
     CDS             557..1150
                     /gene="maf"
                     /locus_tag="MOX77_003957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation inhibitor Maf"
                     /protein_id="HCA3359355.1"
                     /translation="MTTLYLASGSPRRQELLIQLGFSFEQVVPGIEEQRRVQESAQQY
                     VVRLAREKAQAGVALVPRDLPVLGADTIVVLNGEVLEKPRDAAHAAEMLRLLSGNTHQ
                     VMTAVALADSQQTLDCLVVTEVTFRTLSAQDITGYVASGEPLDKAGAYGIQGRGGCFV
                     RKINGSYHAVVGLPLVETYELLSHFNALRDKRDKHDG"
     gene            1140..2609
                     /gene="rng"
                     /locus_tag="MOX77_003958"
     CDS             1140..2609
                     /gene="rng"
                     /locus_tag="MOX77_003958"
                     /EC_number="3.1.26.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006818051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease G"
                     /protein_id="HCA3359356.1"
                     /translation="MTAELLVNVTPSETRVAYIDGGILQEIHIEREARRGIVGNIYKG
                     RVSRVLPGMQAAFVDIGLDKAAFLHASDIMPHTECVAGDEQKQFTVRDISELVRQGQD
                     LMVQVVKDPLGTKGARLTTDITLPSRYLVFMPGASHVGVSQRIESESERERLKKVVAE
                     YCDEQGGFIIRTAAEGVCEEDLASDAAYLKRVWTKVMERKKRPQTRYQMYGELALAQR
                     VLRDFADAQLDRIRVDSRLTYESLLEFTAEYIPEMTSKLEHYSGHQPIFDLYDVENEI
                     QRALERKVELKSGGYLIIDQTEAMTTVDINTGAFVGHRNLDDTIFNTNIEATQAIARQ
                     LRLRNLGGIIIIDFIDMNNEDHRRRVLHSLEQALSKDRVKTSINGFSPLGLVEMTRKR
                     TRESVEHVLCNECPTCHGRGTVKTVETVCYEIMREIVRVHHAYDSDRFLVYASPAVAE
                     ALKGEESHALAEVEIFVGKQVKVQVEPLYNQEQFDVVMM"
     gene            2720..6520
                     /gene="yhdP"
                     /locus_tag="MOX77_003959"
     CDS             2720..6520
                     /gene="yhdP"
                     /locus_tag="MOX77_003959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA2 domain-containing protein YhdP"
                     /protein_id="HCA3359357.1"
                     /translation="MRRLPGILLLTGAALIVIAALLVSGLRLALPHLDAWRPAILNKI
                     ESVTGVPVAASQLSASWQNFGPTLEAHNIHAALKDGGELSIKRVTLALDVWQSLLHMR
                     WQFRDLTFWQLNFRTNTPLQSSDGEGIETSRLSDLFLRQFDHFDLRDSQISFLTLSGQ
                     RAELAIPQLTWLNGKERHRAEGEVSLSSLTGQHGVMQVRMDLRDDDGLLNNGRVWLQA
                     DDIDVKPWLGKWMQDNVALQTARFSLEGWMTLSKGEIAGGDVWLKQGGASWLGDNTTH
                     TLSVDNLTAQISREQPGWQFYIPDTRITLDGKPWPSGALTVAWLPQQDVGGENHTRSD
                     ELRIRASNLELAGLEALRPLAAKLSPVLGEIWQATQPSGKIATLALDIPLQATEKTRF
                     QASWENLAWKQWKLLPGAEHFSGTLAGSVEDGQMKVAMQQAKMPYETVFRAPLEIENG
                     VATLSWLKNENGFQLDGRDIDVKAKAVHARGGFRYLQPTGDEPWLGILAGISTDDGSQ
                     AWRYFPENLMGKALVDYLSGAIQGGEADNATLVYGGNPHLFPYKHNEGQFEVLVPLRN
                     ATFAFQPDWPALKNLNIELDFLNDGLWMRSDSVDLGGVKASKLAAAIPDYSKEKLLID
                     ADINGPGKAVGPYFDETPLKDSLGSTLAELQLDGDVNARLHLDIPLDGEQVTAEGDVS
                     LRNNSLFIKPLNSTLKNLNGKFSFVNGALKSGPLTANWFNQPLNLDFSTTEGAKAYQV
                     AVNLNGNWQPTRMGVLPPQLNDALSGSVTWNGKVGIDLPYHADTTYHIELNGDLRNVS
                     SHLPSPLNKPAGEAIPVNIQADGNLKSFALTGSAGSKNHFNSRWLLNQKLTLDRAIWT
                     TDSRTIPPLPAQQGVELNLPALDGAQWLALFQKGAADNVSSSAEFPQRVTLRTPALSL
                     GGQQWNNLSVVSAPSLNGTKIEAQGREVNATLLMRNHAPWLANIKYLYYNPGVAKTHA
                     SSPTPTSPLASANTISFRGWPDLQLRCEECWLWGQKYGRIDGDFAIKGNTLTLANGLI
                     DTGFARLKANGEWVNAPGNERTSLKGSLHGSNLDTAAGFFGISTPIQNASFNVDYDLH
                     WRNPPWQPEEATLNGILRTRLGKGEFTDLSSGHAGQLLRLLSFDALLRKLRFDFRDTF
                     SEGFYFDSIHSTAWIKDGVLHTDDTLVDGLEADIAMKGSVDLVRRRLDMEAVVAAEIS
                     ATVGVAAAFAVNPIVGAAVFAASKVLGPLWSKVSILRYRITGPVDAPQINEVLRQPRK
                     ESQQ"
     gene            6665..>7221
                     /gene="tldD"
                     /locus_tag="MOX77_003960"
     CDS             6665..>7221
                     /gene="tldD"
                     /locus_tag="MOX77_003960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007888214.1"
                     /note="responsible for the proteolytic maturation of the
                     E. coli pMccB17 plasmid-encoded microcin B17, an exported
                     protein that targets the essential topoisomerase II DNA
                     gyrase; degrades the E. coli plasmid F-encoded CcdA;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease TldD"
                     /protein_id="HCA3359358.1"
                     /translation="MSLNLVSEQLLAANGLNHQDLFAILGQLAERRLDYGDLYFQSSY
                     HESWVLEDRIIKDGSYNIDQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRE
                     NGEGKVKTLAAVAHQPLYTTLDPLQSMSREEKLDILRRVDKAAREADKRVQEVNASLT
                     GVYELILVAATDGTLAADVRPLVRLS"
BASE COUNT         1636 a         1833 c         2143 g         1609 t
ORIGIN      
        1 acgcaatcat cgccttcggg cgcgaccacg ccgtctgcgc gtgcgccggg agggtaatgg
       61 tggcgagcta tcgtagccag gggcgctggg ttatctggct ctcgtttctt attgcgctgt
      121 tgctgcaaat catgccctgg ccggacgaca tcattgtttt ccggccaaac tgggttttgc
      181 tcatcttact gtactggatt ctggccctgc cgcaccgcgt aaatgtgggg acgggatttg
      241 tgatgggtgc catacttgat ctcatcagcg gttccacact tggcgtgcgc gctctgtcga
      301 tgagcattgt cgcctatctg gtcgctctga aattccagct cttccgtaac ctggcgctct
      361 ggcagcaggc gctggtggta atgttgcttt cactggccgt ggacattatt gttttctggg
      421 ccgagttttt agtgatcaac gtctctttca gaccggaagt gttctggagt agtgtagtca
      481 atggcgtgct gtggccctgg ctctttttgc tgatgcgtaa agtacgccag cagtttgctg
      541 tgcaataaag gtcgatatga caactctgta tcttgcttcc ggttccccgc gtcgccagga
      601 attattgatt caacttggat tttcattcga gcaggtcgtg cctggtattg aagagcaacg
      661 gcgtgttcag gaaagcgcgc agcagtatgt tgttcggctg gcgcgcgaaa aggcgcaggc
      721 tggcgtggcg ctggttcccc gtgatctgcc ggtgttgggc gcggatacga tagtcgtgtt
      781 aaacggcgag gtgctggaaa agccgcgcga cgccgctcat gccgcagaaa tgctgcgttt
      841 gctttccgga aatacgcatc aggtgatgac tgctgttgcg cttgcggact cgcagcagac
      901 gctggattgt ctggtggtaa cggaggtgac tttccgcacg ctttctgcgc aggatattac
      961 tggctatgtc gccagcggcg agcctttaga taaagcaggt gcatacggta ttcaggggcg
     1021 gggtggctgt tttgtcagga agataaatgg cagctatcac gccgtggtcg gcttaccgct
     1081 ggttgaaacg tatgagttgt tgagtcattt taacgcactg cgtgataaaa gggataaaca
     1141 tgacggctga attgttggta aacgtaacgc catcggaaac gcgcgtggcg tacattgatg
     1201 gcggtattct tcaggaaatc catattgagc gcgaagcgcg acgcggaatc gtaggcaata
     1261 tctacaaagg tcgtgtaagt cgtgtacttc caggtatgca ggcggctttt gtagatattg
     1321 ggctggataa agccgcattt cttcacgctt ccgacattat gccgcatacc gaatgcgtgg
     1381 cgggcgacga gcaaaaacag tttaccgtgc gcgatatctc cgaactggtg cgtcagggac
     1441 aggatctgat ggtgcaggta gtgaaagatc cgctcggcac gaaaggcgcg cgtttgacca
     1501 cggacatcac gttgccctcc cgttaccttg tttttatgcc cggcgcgtca cacgttggcg
     1561 tttcccagcg catcgaaagc gaaagtgaac gcgagcgcct gaaaaaggtg gtggcggaat
     1621 actgcgacga acagggcggg tttattatcc gtaccgcggc ggaaggcgtg tgtgaagagg
     1681 atctcgcgtc tgacgccgcc tatctcaagc gcgtctggac gaaagtcatg gagcgcaaaa
     1741 agcgtccgca aacgcgctac cagatgtatg gcgaactggc gctggcgcag cgcgtgctgc
     1801 gcgatttcgc cgatgcgcag ttggaccgaa ttcgcgtcga ctcacgtctg acctatgagt
     1861 cgctgctgga gtttaccgca gaatacatcc cggaaatgac cagtaagctg gagcattaca
     1921 gtggccatca gccgatcttc gatctttatg acgtggaaaa tgaaatccag cgcgcgctgg
     1981 agcgtaaagt tgaactcaag tctggcggtt atctgattat cgaccaaacc gaagcgatga
     2041 cgacggtaga tatcaatacc ggcgcgtttg tcggacaccg taatctcgac gacaccattt
     2101 ttaataccaa tattgaagcg acgcaggcca ttgcccgcca gctacgcctg cgtaatctgg
     2161 gcggcattat cattatcgat tttatcgaca tgaataatga agatcatcgc cgccgggtgc
     2221 tgcattcgct ggaacaggcg ttaagtaagg atcgcgtgaa aaccagtatt aacggttttt
     2281 cgccgctggg actggtggaa atgacccgta aacggacccg tgaaagcgtg gaacatgtgc
     2341 tttgtaacga gtgtccaacc tgtcatggcc gcgggacggt aaaaacggtg gaaaccgtct
     2401 gctatgagat catgcgtgaa attgtacgtg ttcatcacgc ttatgactcc gatcgcttcc
     2461 tggtttatgc ttctcctgcg gtggcggaag cgctgaaagg cgaagaatca cacgcgctgg
     2521 cggaagtcga aatctttgtc ggcaaacagg ttaaagttca ggtcgaaccg ctttataacc
     2581 aggagcagtt tgacgtcgta atgatgtaat tgagtaatag caccagcgca tgtaggccgg
     2641 ataaggcgca agcgccgcca tccggcaata taccctcaag gggggtgagt cgtatttttt
     2701 ggcagacaag gagagacgcg tgaggcgatt gccggggatt ttattgctca ctggagccgc
     2761 gctcatcgtc attgcagcgc tgctggttag cgggctgcgc ctggcgttgc ctcatcttga
     2821 cgcctggcgt ccagctatcc tgaataaaat tgagtccgtg accggcgtgc cggtggccgc
     2881 cagccaactc tccgcaagct ggcaaaattt tggccctacg ctggaagcgc ataatattca
     2941 tgccgccctg aaagatggcg gcgagctgtc gataaaacgc gttacgctgg cgctggacgt
     3001 ctggcaaagc ctgttgcaca tgcgctggca gtttcgcgac ctgaccttct ggcaactcaa
     3061 tttccgcacc aacacgcctc ttcaaagcag cgacggcgaa ggcatcgaaa ccagccgttt
     3121 aagcgatctt ttcctgcggc agttcgatca tttcgatctg cgcgatagcc aaatcagttt
     3181 tctgacgctt tcaggacaac gcgcggaact ggcgatccca caacttacct ggctaaacgg
     3241 caaagagcgg caccgagccg aaggcgaggt cagcctctcc agcctgaccg ggcagcacgg
     3301 cgtgatgcag gtgcggatgg atttacgcga tgacgacggt ctgctaaata acggcagagt
     3361 ctggttacag gccgacgata ttgacgtcaa gccgtggctg ggcaaatgga tgcaggataa
     3421 tgtggcgctc cagacggcgc gtttcagtct ggaaggctgg atgacgctca gtaaaggcga
     3481 aatcgccgga ggggacgtct ggctgaaaca gggcggcgca agctggctgg gcgataacac
     3541 gacgcatacg ttgtctgtcg ataacctgac ggcgcagatt agccgcgagc agccgggctg
     3601 gcagttttat attccggaca cacggattac gcttgatggc aaaccctggc cgagcggagc
     3661 cttaaccgtg gcctggctcc cgcagcagga cgtcggcggc gagaatcaca cacgtagcga
     3721 tgagctacgc attcgcgcca gtaatcttga actggcgggg ctggaagcat tacgtccgct
     3781 ggcggctaaa ctgtcgcctg tgctgggcga aatatggcag gctacgcagc cgagcggaaa
     3841 gatcgccaca ctggcgctgg atattccgct acaggcgacc gaaaaaacgc gttttcaggc
     3901 atcgtgggaa aatcttgcct ggaaacagtg gaagctgttg cccggcgcgg aacatttttc
     3961 cggtacgctg gcgggaagcg tagaagacgg gcagatgaag gttgcgatgc agcaggctaa
     4021 gatgccctat gaaaccgttt ttcgcgcgcc gctggaaatt gaaaacggcg tcgcgacgct
     4081 tagctggttg aagaatgaga acggctttca gcttgatggc cgcgacattg acgtcaaagc
     4141 aaaggcggta catgcgcgcg gcgggttccg ctatctgcaa ccgacgggcg acgaaccgtg
     4201 gctgggtatt ctggccggaa tcagtaccga tgatggatct caggcgtggc gctattttcc
     4261 ggaaaacctg atgggcaaag cgctagtcga ttaccttagc ggcgcgattc agggcggcga
     4321 ggcggataac gccacgttgg tttacggtgg taacccgcac ctctttccct ataagcataa
     4381 cgaaggtcag tttgaagtgc tggtgccgct acgcaatgcg acgtttgctt ttcaacccga
     4441 ctggccggcg ctaaaaaatc tcaacattga actggatttc ctgaacgacg gcctgtggat
     4501 gcgttcggat agcgtcgatt tgggcggggt gaaggccagc aaactcgcgg cggcgattcc
     4561 ggattattcc aaagagaaac tgctcattga tgccgatatt aacgggccgg gaaaagccgt
     4621 tgggccttat tttgacgaga cgccgctaaa agactcgctt ggctcgacgc tggcggagct
     4681 ccaattagat ggcgatgtga atgctcgctt acatcttgat attccgctgg acggagaaca
     4741 ggttaccgcc gagggcgatg tctcgttgcg taataacagt ctgtttatta agccgctaaa
     4801 cagcacgctc aaaaatctga acggtaaatt cagctttgtg aatggcgcgc taaaaagcgg
     4861 gccactgacg gcaaactggt ttaatcagcc gcttaacctg gatttcagta cgacggaagg
     4921 ggcaaaagcc tatcaggtcg ccgtcaacct gaacggtaac tggcagccaa cgcgtatggg
     4981 cgtcttaccg ccgcaactga atgacgccct gagcggcagc gtgacgtgga atggtaaagt
     5041 cggcatcgat cttccatatc acgctgacac cacttatcac atcgagctga acggcgatct
     5101 gagaaatgtg agcagtcact taccttctcc gctaaataaa cccgcaggcg aagccattcc
     5161 ggtgaacatt caggctgacg gcaacctgaa aagttttgcg ctaacgggga gcgcagggag
     5221 taaaaatcac tttaacagcc gctggttatt aaatcagaag ctgacgttgg atcgggctat
     5281 ctggacgacg gacagccgga cgattccgcc attacctgct caacaaggcg ttgagctcaa
     5341 tctgccggcg ctggatggcg cgcaatggct ggcgttattc cagaaaggcg cggcggataa
     5401 cgtgagcagt tcggccgagt ttcctcaacg cgtcacgttg cgtactcccg cgctatcgct
     5461 gggcggccag cagtggaaca atttgagcgt cgtttcagcc ccctcgctga acggaacaaa
     5521 aattgaagcg cagggccgtg aggtgaacgc cacgctactc atgcgcaacc atgcgccgtg
     5581 gctggcgaac attaagtacc tgtactacaa ccctggcgtc gcaaaaacgc acgcctcgtc
     5641 accaacgccg acatcgccgt tggcttcggc gaacacgatt agcttccgcg gctggccgga
     5701 cttacagctt cgctgcgaag agtgctggct atgggggcaa aaatatgggc gtattgatgg
     5761 cgatttcgcc atcaaaggca atacgctgac tctggcgaat ggcctgatcg ataccggatt
     5821 cgcccgtttg aaagcgaacg gcgagtgggt gaatgcgccg ggtaatgaac gaacctcgct
     5881 gaaaggtagt ctgcatggta gtaacctcga cacggctgcc gggttcttcg gcatctcgac
     5941 gccaatccag aacgcgtctt ttaacgtaga ttacgatctg cactggcgaa acccgccctg
     6001 gcaacctgag gaagccacgc tcaacgggat tttacgtacg cgtctgggca aaggcgagtt
     6061 tactgatctc agtagcggtc atgccggaca gctactgcgg ctgctcagtt ttgatgcgtt
     6121 gctgcgtaag ctgcggtttg acttcagaga tacctttagc gagggcttct atttcgactc
     6181 tattcatagt accgcgtgga ttaaagatgg cgtcctgcat actgacgata cgctggtgga
     6241 tgggctggaa gcggatattg caatgaaagg ttctgttgat ctggtgcgtc gtcgtcttga
     6301 tatggaggcc gttgtcgcgg cggaaatttc cgccaccgtg ggcgtcgctg ccgcgtttgc
     6361 cgttaacccg attgtcggcg cggcggtatt tgccgccagt aaagtgttgg ggccgctatg
     6421 gagcaaggtc tccattctgc gttatcgcat taccggtccg gtcgatgcgc cgcagatcaa
     6481 cgaagttctg cgccaaccga gaaaagaaag ccagcaatga tttgacgggg gcgaggaatt
     6541 gccccactct cagtaaatag tcatgccgga cggcgctgcg tttatccggt ttgcacaatc
     6601 taacaacgta gtccggataa ggcgtgaacc gccatccggc agaaatcaac gagtagcaaa
     6661 aacgatgagt ctgaacctgg taagtgaaca attgctagcg gcgaatggcc tgaaccatca
     6721 ggatctgttc gctattttgg gccaactggc cgaacgccgt cttgattatg gcgacctcta
     6781 ttttcagtcg agctatcacg aatcctgggt tttagaagac cgcatcatta aagatggttc
     6841 atataatatc gaccagggcg ttggcgttcg cgccattagc ggcgaaaaaa ccggttttgc
     6901 ttatgctgac cagataagcc tccttgcgct ggagcagagt gcgcaggcag cgcgaaccat
     6961 tgtacgcgag aacggcgaag gcaaggtaaa aacgctcgcc gccgtagcgc atcagccgct
     7021 ctacaccacc cttgatccgc tgcaaagtat gagccgcgaa gagaagctgg atatcctcag
     7081 acgcgttgat aaagcggcgc gagaagccga taaacgcgtg caggaagtta acgccagcct
     7141 gaccggcgta tatgaattaa tcctcgtggc ggcgaccgac gggacgctgg cggcggatgt
     7201 ccgtccactg gtgcgtttgt c
//
LOCUS       DAGWFR010000189         7204 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.192, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000189 DAGWFR010000000
VERSION     DAGWFR010000189.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 7204)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7204)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7204
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.192"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..591
                     /locus_tag="MOX77_003961"
     CDS             <1..591
                     /locus_tag="MOX77_003961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3359359.1"
                     /translation="TVRKVPAYTGERPSLWSVVGLIWKPGLGLALQGVGFAVIGTFIS
                     LYFVSNGWTMAGFTLTAFGGAFVLMRILFGWMPDRFGGVKVAVVSLLVETAGLLLLWL
                     APTAWIALVGAALTGAGCSLIFSALGVEVVKRVPAQVRGTALGGYAAFQDISYGVTGP
                     LAGMLATSYGYPSVFLAGAISAVVGILVTILSFRRG"
     gene            complement(588..1589)
                     /gene="flk"
                     /locus_tag="MOX77_003962"
     CDS             complement(588..1589)
                     /gene="flk"
                     /locus_tag="MOX77_003962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis regulator Flk"
                     /protein_id="HCA3359360.1"
                     /translation="MHPISGAPAQPPGEGRNPLSAASEQPLSMQQRTVLERLITRLIS
                     LTQQQSAEVWAGMKHDLGIKNDAPLLSRHFPAAEQNLTQRLGVAQQNHANRQVLSQLT
                     ELLGVGNNRQAVSDFIRQQYGQTALSQLTPDQLKNVLTLLQQGQLSIPQPQQRPATDR
                     PLLPAEHNTLNQLVTKLAAATGESNKLIWQSMLELSGVKSGELIPAKQFTHLATWLQA
                     RQTLSLQHAPTLHTLQAALKQPLEPDELTAIKEYAQHTYQIQPQTVLTTAQVQDLLNH
                     IFLRRVEREADELEPLSIQPIYRPFAPMIETVKNLSARPGLLFIALIIVLALFWLVS"
     gene            1693..2829
                     /gene="pdxB"
                     /locus_tag="MOX77_003963"
     CDS             1693..2829
                     /gene="pdxB"
                     /locus_tag="MOX77_003963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-phosphoerythronate dehydrogenase PdxB"
                     /protein_id="HCA3359361.1"
                     /translation="MKILVDENMPYARELFSRLGEVKAVPGRPIPVEELNHADALMVR
                     SVTKVNESLLSGTPINFVGTATAGTDHVDEAWLKQAGIGFSAAPGCNAIAVVEYVFSA
                     LLMLAERDGFSLRDRTIGIVGVGNVGSRLQTRLEALGIRTLLCDPPRAARGDEGDFRT
                     LDELVQEADVLTFHTPLYKDGPYKTLHLADETLIRRLKPGAILINACRGPVVDNAALL
                     ARLNAGQPLSVVLDVWEGEPDLNVALLEAVDIGTSHIAGYTLEGKARGTTQVFEAYSA
                     FIGREQRVALETLLPAPEFGRITLHGPLDQPTLKRLAHLVYDVRRDDAPLRKVAGIPG
                     EFDKLRKNYLERREWSSLYVMCDDETAAALLCKLGFNAVHHPAH"
     gene            2897..3910
                     /locus_tag="MOX77_003964"
     CDS             2897..3910
                     /locus_tag="MOX77_003964"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HCA3359362.1"
                     /translation="MSEGWNIAILGATGAVGEALLETLAERQFPVGEIYALARHESAG
                     EHLRFGGKSVIVQDAADFDWTQAQLAFFVAGAEASAAWIDDATNAGCLVIDSSGLFAL
                     EPDVPLVVPEVNPYVLADYRNRNVIAVADSLTSQLLAALKPLIDQGGLSRIAVTSMLS
                     ASAQGKKAVDALAGQSAKLLNGIPIDEDDFFGRQLAFNMLPLLPDREGSVRQERRIVD
                     EVRKILQDDGVMISASVVQSPVFYGHAQMVSFEALRPLAAEEAREAFSRGEDIVLSEE
                     TDYPTQVGDASGNPQLSIGCVHNDYGMPEQIQFWSVADNVRFGGALMAVKIAEKLVQE
                     YLY"
     gene            3910..4722
                     /gene="truA"
                     /locus_tag="MOX77_003965"
     CDS             3910..4722
                     /gene="truA"
                     /locus_tag="MOX77_003965"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HCA3359363.1"
                     /translation="MSGQQSSPVYKIALGIEYDGSKYYGWQRQNEVRSVQEKLEKALS
                     QVANEPINVFCAGRTDAGVHGTGQVVHFETTALRKDAAWTLGVNANLPGDIAVRWVKT
                     VPDDFHARFSATARRYRYIIYNHRLRPAVLAKGVTHYYEPLDAERMHRAAQCLLGEND
                     FTSFRAVQCQSRTPWRNVMHINVTRHGPYVVVDIKANAFVHHMVRNIVGSLLEVGAHN
                     QPESWIAELLAARDRTLAAATAKAEGLYLVAVDYPDRFDLPKPPMGPLFLAD"
     gene            4771..5430
                     /locus_tag="MOX77_003966"
     CDS             4771..5430
                     /locus_tag="MOX77_003966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HCA3359364.1"
                     /translation="MDLIYFIIDFILHIDVHLAELVAEYGVWVYAILFLILFCETGLV
                     VTPFLPGDSLLFVAGALASLETNDLNVHVMVALMLIAAIVGDAVNYTIGRLFGEKLFS
                     NPNSKIFRRSYLDKTHQFYEKHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYN
                     VIGALLWVLLFTYAGYFFGTIPLIQDNLKLLIVGIIVVSILPGVIEIVRHKRAASRAA
                     K"
     gene            5580..6494
                     /gene="accD"
                     /locus_tag="MOX77_003967"
     CDS             5580..6494
                     /gene="accD"
                     /locus_tag="MOX77_003967"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase, carboxyltransferase
                     subunit beta"
                     /protein_id="HCA3359365.1"
                     /translation="MSWIERIKSNITPTRKASIPEGVWTKCDSCGQVLYRAELERNLE
                     VCPKCDHHMRMSARNRLHSLLDEGSLVELGSELEPKDVLKFRDSKKYKDRLASAQKET
                     GEKDALVVMKGTLHGMPVVAAAFEFAFMGGSMGSVVGARFVRAVEQALEDNCPLVCFS
                     ASGGARMQEALMSLMQMAKTSAALAKMQERGLPYISVLTDPTMGGVSASFAMLGDLNI
                     AEPKALIGFAGPRVIEQTVREKLPPGFQRSEFLIEKGAIDMIVRRPEMRLKLASILAK
                     LMNLPAPNPDAPREGVVVPPAPDQESEA"
     gene            6562..>7204
                     /gene="folC"
                     /locus_tag="MOX77_003968"
     CDS             6562..>7204
                     /gene="folC"
                     /locus_tag="MOX77_003968"
                     /EC_number="6.3.2.12"
                     /EC_number="6.3.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tetrahydrofolate
                     synthase/dihydrofolate synthase"
                     /protein_id="HCA3359366.1"
                     /translation="MKNKSIPQAASPLASWLSYLENLHSKSIDLGLERVSQVAARLDI
                     LKPAPFVFTVAGTNGKGTTCRTLESVLIAAGYRVGVYSSPHLVRYTERVRVQGKELAE
                     SAHTASFAEIEAARGDISLTYFEYGTLSALWLFKQANLDVVILEVGLGGRLDATNIVD
                     ADVAVITSIALDHTDWLGPDRESIGREKAGIFRAEKPAIVGEPEMPATIADVAQ"
BASE COUNT         1471 a         1802 c         2212 g         1719 t
ORIGIN      
        1 accgtgcgta aagtgcctgc gtatacgggg gagcgacctt cactgtggag cgtggtcggg
       61 cttatctgga aaccgggcct gggcctggca ttgcagggcg tgggctttgc cgtcatcggt
      121 acgtttattt cactttattt tgtcagcaat ggctggacga tggcgggatt caccctgacc
      181 gcgtttggcg gtgcgtttgt actgatgcgc atattgttcg gttggatgcc ggatcgcttt
      241 ggcggcgtga aggtcgccgt tgtctcattg ctggttgaga cggcagggtt gctgctcttg
      301 tggctggcgc cgacggcctg gatagcgctg gtaggcgcgg cgctcaccgg ggcagggtgt
      361 tcactgattt tctcggcgct gggcgtggag gttgtgaaac gcgtacctgc acaggtacgc
      421 ggtacggcgc tcggcggcta cgccgcgttt caggatatct cctacggcgt taccggcccg
      481 ctggcgggca tgctggccac gtcatacggc tatccttccg tattcctcgc gggagcgatc
      541 tccgcggtgg ttggcatcct ggtgacgata ttatcgttcc ggcgcggtta agaaaccagc
      601 cagaaaagcg ccagtacaat tattagcgcg ataaacaaca ggcctggtcg cgcagacaga
      661 tttttcacgg tttcaatcat cggcgcaaac gggcggtaga tgggttgaat agagagcggt
      721 tcgagctcat ccgcctcccg ctctacgcga cgcaggaaaa tatggttaag taaatcctgc
      781 acctgcgcgg tggtcagcac cgtttgcggc tgaatttgat aagtgtgttg ggcatactct
      841 ttgatcgctg tgagttcgtc cggttccagc ggttgtttta acgcagcttg cagcgtatgt
      901 agcgtaggcg cgtgttgtag tgacagcgtc tgccgcgcct gtagccatgt cgccagatgg
      961 gtaaactgtt ttgccggaat gagctcgccg cttttcacgc cggagagttc cagcattgat
     1021 tgccagataa gtttgtttga ctcgccggtc gcggccgcca gcttcgtcac caactgattc
     1081 aacgtattat gttcagcagg caataatggc cgatccgttg ccggacgttg ttgcggctgc
     1141 ggaatggaaa gctgcccctg ttgcaggagc gtcagcacgt ttttgagttg atcgggcgta
     1201 agctggctaa gcgcggtttg accgtattgt tgacggataa aatcgctgac ggcctgacga
     1261 ttattcccga cgccaagcag ctctgttagc tgtgaaagca cctgacgatt ggcgtgattt
     1321 tgctgcgcta cgcccagacg ctgggtaaga ttctgttcag cggcggggaa gtggcgcgac
     1381 agtagcggcg cgtcattttt tatccccaga tcgtgtttca ttccggccca tacttccgcg
     1441 ctttgctgct gggtcagtga aatcaggcgc gtgatcagcc tttccagtac cgtacgctgt
     1501 tgcatggaaa gcggctgctc gctcgcagcg gaaagaggat tacgcccttc gcctggaggc
     1561 tgtgcagggg cgccggagat gggatgcata attaattatc ctttaaccat aaatctgagc
     1621 aatatatgct tggcggccag attatggcac acttgtccgg ttaactctcg ttctcaaaca
     1681 ggtacgacag tcgtgaaaat tctcgttgat gaaaatatgc cttacgcccg cgaattattt
     1741 agccgcctgg gtgaggtaaa ggcagtgccg ggtcgcccga tccccgttga agaattgaac
     1801 catgccgatg cgttaatggt gcgttcggtc acgaaagtga atgaatcgct gctgagcggc
     1861 acgccgatta acttcgttgg tactgctacg gcaggcaccg atcatgtgga tgaggcatgg
     1921 ctgaagcagg cgggcatcgg tttttcagcc gcgcccggct gtaatgctat cgccgtggtg
     1981 gagtatgtgt tttccgcgct gttgatgctg gccgaacgtg acggcttttc gttacgcgat
     2041 cgcactatag ggattgtcgg cgtgggtaac gtcggaagcc ggctacagac caggcttgaa
     2101 gcgttgggta tccgcacgtt gctgtgcgat ccgccacgcg ccgcacgcgg ggacgagggt
     2161 gattttcgta cgctggatga gctggtgcag gaagcggatg tcctgacttt ccatacgccg
     2221 ctctataaag acggaccgta caaaacgctg catctggccg atgagacgct gatccgtcga
     2281 ctgaaacccg gcgccattct cattaacgcc tgccgcggcc cggtggtgga taacgccgca
     2341 ttgctggcgc gactcaatgc cgggcagccg ctgagcgtgg tgcttgatgt gtgggagggc
     2401 gaaccggatc ttaacgtcgc gctactggaa gccgtggata tcggcacgtc gcatattgcc
     2461 ggctatacgc tggaaggcaa agcgcgcggc accacccagg tctttgaggc gtatagcgcg
     2521 tttatcggtc gcgagcagcg tgtcgcgctg gagacattac tgcctgcgcc tgagtttggt
     2581 cgtattacgc ttcacggccc gctggatcaa ccgacgctga aaagactggc gcatttggtg
     2641 tatgatgtgc gccgcgacga tgcgccactg cgtaaagtcg ctggaattcc gggtgaattt
     2701 gataaattgc gtaaaaatta tcttgagcgc cgtgaatggt cgtctttata cgtgatgtgt
     2761 gacgacgaaa cggcagccgc cttgctgtgt aagctaggtt ttaacgctgt tcatcacccg
     2821 gcacattaat gtcttcttaa tgctccctgt cgaataatgc gacagggacg cttatgtatt
     2881 tctggagtaa atcaccatgt ctgaaggctg gaacattgcc attctgggcg caacgggcgc
     2941 cgtaggcgaa gccctgcttg aaacactggc tgaacgccag ttcccggtcg gtgaaattta
     3001 tgcgttggcg cgtcatgaaa gcgcgggcga gcacctccgt tttggtggca agtcggtcat
     3061 tgtccaggat gcggcggact ttgactggac gcaggcgcag ttggcgtttt tcgttgccgg
     3121 cgcagaggca tcggctgcct ggatagacga cgcgaccaat gcaggttgcc tggtgataga
     3181 ttccagcggt ctgttcgcgc tggagcctga tgtgccgctg gtcgtgccgg aagttaaccc
     3241 gtatgtactg gcggattacc gtaaccgtaa cgtgattgcg gtcgccgata gtctgaccag
     3301 tcaactgctg gcggcgctca agccgttaat cgatcagggg ggactgtcgc gcatcgccgt
     3361 caccagtatg ttatcagcgt ccgcgcaggg gaaaaaagcg gtcgatgcgc tggccggaca
     3421 aagtgcgaag ctgcttaacg gcataccgat tgatgaagat gatttctttg gccgccagtt
     3481 ggcgttcaat atgctgccgc tgctgccgga tcgggaaggc agcgtgcgcc aggaacgtcg
     3541 tatcgtcgat gaagtgcgta aaattttgca ggatgatggc gtgatgatct ccgccagtgt
     3601 cgtgcagtcg ccggtgttct atggccatgc gcagatggtg agctttgaag cgctccgtcc
     3661 gctggcggcg gaagaggcgc gcgaggcgtt ttcccgcggt gaagatatcg tactgtcaga
     3721 agagacggat tacccgacgc aggtgggcga cgcttccggc aatccacagc tctctattgg
     3781 ctgtgtgcat aatgattacg gtatgccgga acaaattcag ttctggtcag tggcggacaa
     3841 cgtgcgtttc ggcggcgcgc tgatggccgt taaaattgcg gagaagctgg tgcaggagta
     3901 tctgtactga tgtccggaca gcaatcatcg ccggtctata aaattgcgct gggtattgag
     3961 tacgacggca gcaagtatta tggctggcag cgtcagaatg aagtgcgcag cgtgcaggaa
     4021 aagctggaaa aagcgctctc gcaggtggca aatgaaccta ttaacgtgtt ctgcgccggg
     4081 cgcaccgatg ccggcgttca cggcaccggg caggttgtcc atttcgaaac gaccgcattg
     4141 cgcaaagatg cggcatggac gctgggggta aatgcgaatt tgcctggtga cattgccgtg
     4201 cgctgggtga aaactgtacc ggatgatttt cacgcgcgat ttagcgctac ggctcgccgt
     4261 tatcgctata tcatctacaa tcatcgactg cgtcctgcgg tattagcaaa aggcgtgacg
     4321 cattactatg agccgctgga tgcagagcgg atgcatcgcg cggcgcagtg tctgcttggc
     4381 gaaaatgatt ttacctcgtt tcgcgcggtg cagtgccagt cgcgcacgcc gtggcgtaat
     4441 gtgatgcaca tcaacgttac ccgccacggc ccttatgtgg tggtcgatat caaagcgaat
     4501 gcctttgttc atcatatggt caggaatatt gtcggcagcc tgctggaagt aggcgctcac
     4561 aaccagccgg agagctggat cgcagagctg ttagcggcca gggacagaac gctggcggcg
     4621 gcaacggcga aggcggaagg gctatatttg gttgcggtgg attaccctga ccggtttgac
     4681 cttccaaaac cgccaatggg cccgctattt ctggcggact aatccgaatc gcacacccga
     4741 aacgtgtcgg gtagaaaggc aaagacaaat atggacctga tctactttat tattgatttt
     4801 attctgcaca tcgatgtgca tctggcggag ctggtcgcgg agtacggcgt ctgggtgtac
     4861 gctattttgt ttttgattct gttttgtgaa accggcctgg tcgtcacgcc gttcctgccg
     4921 ggcgactcgc tgctgtttgt cgccggggcg ctggcttcgc tggaaaccaa cgatctcaat
     4981 gtgcatgtca tggtggcgtt aatgctgatc gccgcaattg tcggcgatgc ggtaaattac
     5041 acgattggtc gactgttcgg cgaaaaactg ttcagtaatc cgaattcgaa aattttccgc
     5101 cgcagttatc tggataaaac ccaccagttt tatgaaaaac acggcggtaa aactatcatt
     5161 ctcgctcgct tcgtgccgat cgtcagaacc tttgcgccgt ttgtggcagg gatggggcac
     5221 atgtcctatc ggcattttgc cgcctataac gtcatcggcg cgctgctgtg ggtgctgctc
     5281 tttacctacg ccggttattt cttcggtacg ataccgttga ttcaggataa ccttaagctg
     5341 ctgattgtgg ggattatcgt ggtttcgata ttacctggcg tcattgagat tgtccggcat
     5401 aagcgcgctg cgtcgcgtgc cgcaaaatag aaagtaactc agcggttcga ccactttttt
     5461 atccaaagtt tcgggctgtt atgttttaat gtgcaacatt catggtctgt tgggggcaaa
     5521 aatggcatta tgcgcccctt ataataaagc tgactaaggt tcaggcagaa aggtcaccaa
     5581 tgagctggat tgaacgaatt aaaagcaaca ttactcccac ccgcaaggca agcattcctg
     5641 aaggggtgtg gaccaagtgt gatagctgcg gtcaggtttt ataccgcgct gagctggaac
     5701 gtaatcttga ggtctgtcct aagtgtgacc atcatatgcg catgtcggcg cgcaatcgcc
     5761 tgcatagcct gttagatgaa ggttcccttg tggagttggg tagcgagctg gagccgaaag
     5821 acgtgctcaa gtttcgcgac tccaaaaaat ataaagacag actggcgtcc gcgcagaaag
     5881 aaaccggcga gaaagacgcg ctggtggtca tgaaagggac gcttcacggt atgccggttg
     5941 tcgccgccgc gtttgaattc gcgttcatgg gcggctcaat ggggtctgtc gttggcgcac
     6001 gcttcgttcg cgccgttgaa caggcgctgg aagacaactg tccgttagtg tgtttctctg
     6061 cttccggcgg cgcgcgtatg caagaagcgc tgatgtcgct gatgcagatg gcgaaaacct
     6121 cggcggcgct ggctaaaatg caggaacgtg gtctgcccta catctcggta ttgaccgatc
     6181 cgacaatggg cggcgtttcc gccagttttg cgatgctggg cgatctcaac atcgccgagc
     6241 caaaagccct gattggcttc gccggcccgc gcgttatcga acaaaccgtt cgtgagaagc
     6301 tcccgccagg attccagcgc agtgagttcc tgatcgaaaa aggcgctatt gatatgatag
     6361 tccgccgtcc ggaaatgcgc ctgaagctgg cgagcattct ggcgaagctg atgaatctgc
     6421 ccgcgccgaa cccggacgcc ccgcgtgaag gcgtggtggt gcctccggcg ccggatcagg
     6481 agtctgaggc ctgataactg aaaagggcag ggccgcaggc tctgcccttt tgcttttcac
     6541 cgtaaagaag cagcggaatc aatgaaaaac aaatctatac ctcaagctgc gtcgcccctg
     6601 gcctcgtggc tttcttatct ggaaaacctg cacagcaaga gtatcgattt aggccttgag
     6661 cgcgtaagcc aggtggcagc gcgtctggac atcctcaagc ctgcgccgtt cgtttttacc
     6721 gttgcgggaa ccaacggtaa aggtacgacc tgtcgaacgc tggagtcggt gttaatcgcg
     6781 gcgggatacc gtgtgggcgt ctatagttca cctcatctgg tacgttacac cgagcgcgtg
     6841 cgcgtgcagg ggaaagaatt agcggaatcc gcgcataccg cgtcctttgc ggaaatagaa
     6901 gcggcgcgcg gcgatatttc attgacctat tttgaatatg gtacgttgtc ggcattgtgg
     6961 ctgtttaaac aggctaacct tgacgtggtg attctggagg tcgggttggg cgggcgcctg
     7021 gacgccacga acattgtgga tgccgatgta gcggtaatta ccagcatcgc gcttgaccat
     7081 actgactggc tggggccgga tcgcgaaagt attggccgcg agaaggccgg gatttttcgt
     7141 gcggaaaaac ccgctatcgt cggcgaaccg gaaatgccgg caaccatcgc ggatgtcgcg
     7201 cagg
//
LOCUS       DAGWFR010000190         7192 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.193, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000190 DAGWFR010000000
VERSION     DAGWFR010000190.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 7192)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7192)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7192
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.193"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..652)
                     /gene="rsmC"
                     /locus_tag="MOX77_003969"
     CDS             complement(<1..652)
                     /gene="rsmC"
                     /locus_tag="MOX77_003969"
                     /EC_number="2.1.1.172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(1207)-N(2))-methyltransferase
                     RsmC"
                     /protein_id="HCA3359367.1"
                     /translation="MSAFTPASEVLLRHSDDFEQSRILFAGDLQDDLPARFECAASRA
                     YTQQFHHWQALSRQMGDNVRFSLVAQASDVADCDTLIYYWPKNKPEAQFQLMNILSLM
                     PVGSDVFVVGENRSGVRSAEPMLADYAPLNKVDSARRCGLYHGRLEKQPQFSLESWWA
                     EYNIDGLTIKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAALASH"
     gene            755..1192
                     /locus_tag="MOX77_003970"
     CDS             755..1192
                     /locus_tag="MOX77_003970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit psi"
                     /protein_id="HCA3359368.1"
                     /translation="MTSRRDWQLQQLGITQWALRRPGALQGEIAISLPAHVRLIVVAE
                     ELPALNEPLMRDILRALTVSPDQVLPLTPERVAMLPQGSRCNSWRLGTDAPLQLEGAQ
                     VTTPAFNELRVNPAARAALWQQICEHEHDFYPQHDRSPRSLAD"
     gene            1137..1583
                     /gene="rimI"
                     /locus_tag="MOX77_003971"
     CDS             1137..1583
                     /gene="rimI"
                     /locus_tag="MOX77_003971"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HCA3359369.1"
                     /translation="MNTISILSTTDLPAAWQIEQRAHAFPWSEKTFFGNQGERYLNFK
                     LTADDRMAAFAITQVVLDEATLFNIAVDPDFQRRGLGRMLLEHLIDELEKRGVVTLWL
                     EVRASNAAAIALYESLGFNEATIRRNYYPTAQGHEDAIIMALPISM"
     gene            1605..2282
                     /gene="yjjG"
                     /locus_tag="MOX77_003972"
     CDS             1605..2282
                     /gene="yjjG"
                     /locus_tag="MOX77_003972"
                     /EC_number="3.1.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine 5'-nucleotidase"
                     /protein_id="HCA3359370.1"
                     /translation="MKWDWIFFDADETLFTFDSFTGLQRMFLDYSVTFTAEDFQDYQA
                     VNKPLWVDYQNGAITSLQLQHARFQSWAERLNVAPGRLNDAFISAMAEICSPLPGAVS
                     LLNAIRGQAKIGIITNGFTALQQTRLERTGLREYFDLLVISEQVGVAKPDPKIFNYAL
                     EQAGNPDRSRVLMVSDTAESDILGGINAGLSTCWLNAHHREQPAGIHPTWTVASLSEL
                     EQLLCKH"
     gene            2374..3963
                     /gene="prfC"
                     /locus_tag="MOX77_003973"
     CDS             2374..3963
                     /gene="prfC"
                     /locus_tag="MOX77_003973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HCA3359371.1"
                     /translation="MTLSPYLQEVAKRRTFAIISHPDAGKTTITEKVLLFGQAIQTAG
                     TVKGRGSSQHAKSDWMEMEKQRGISITTSVMQFPYHDCLVNLLDTPGHEDFSEDTYRT
                     LTAVDCCLMVIDAAKGVEDRTRKLMEVTRLRDTPILTFMNKLDRDIRDPMELLDEVEN
                     ELKIGCAPITWPIGCGKLFKGVYHLYKDETYLYQTGKGHTIQEVRIVKGLNNPDLDAA
                     VGEDLAQQLRDELELVQGASNEFDEELFLAGEITPVFFGTALGNFGVDHMLDGLVAWA
                     PAPMPRQTDTRTVEASEERFTGFVFKIQANMDPKHRDRVAFMRVVSGKYEKGMKLRQV
                     RTGKDVVISDALTFMAGDRSHVEEAYPGDILGLHNHGTIQIGDTFTQGEMMKFTGIPN
                     FAPELFRRIRLKDPLKQKQLLKGLVQLSEEGAVQVFRPISNNDLIVGAVGVLQFDVVV
                     ARLKSEYNVEAIYESVNVATARWVESADAKKFEEFKRKNETQLALDGGDNLTYIAPTM
                     VNLNLTQERYPDVQFRKTREH"
     gene            4365..4982
                     /gene="osmY"
                     /locus_tag="MOX77_003974"
     CDS             4365..4982
                     /gene="osmY"
                     /locus_tag="MOX77_003974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone OsmY"
                     /protein_id="HCA3359372.1"
                     /translation="MTMTRLKISKTLLAVMLTSAVATGSAFAENATTDKAQSGTETAG
                     QKVDSSMNKVGNFMDDSAITAKVKAALVDHDNIKSTDISVETNQKVVTLSGFVESQAQ
                     AEAAVKVAKGVEGVTSVSDKLHVRDNKEGSVKGYAGDTATTSEVKAKLLADDLVPSRK
                     VKVETTDGVVQLSGTVETQEQSDRAESIAKAVDGVKSVKNDLKVQ"
     gene            5111..5272
                     /locus_tag="MOX77_003975"
     CDS             5111..5272
                     /locus_tag="MOX77_003975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002887716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1328 domain-containing protein"
                     /protein_id="HCA3359373.1"
                     /translation="MFRWGIIFLVIALIAAALGFGGLAGTAAGAAKIVFVVGIVLFLV
                     SLFMGRKRP"
     gene            5396..6469
                     /locus_tag="MOX77_003976"
     CDS             5396..6469
                     /locus_tag="MOX77_003976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin family protein"
                     /protein_id="HCA3359374.1"
                     /translation="MGQRIPVTLGNIAPLSLTPFRSGRMALVCEGGGQRGIFTAGVLD
                     EFMRAQFNPFHLYFGTSAGAQNLSAYLCNQPGYGRKVIMRYTTRREFFDPLRFVRGGN
                     LIDLDWLVESTAARMPLQMDTSARLFDSGKSFYMCACRGDDYTPGYFSPTKQNWLDII
                     RASSAIPGFYRTGVTLEGINYLDGGISDAIPVQEAAKRGAKTIVVIRTVPSQMYYTPQ
                     WFKRMERWLGESSLQPLVNLVQHHETSYSAIQQFIEKPPGKLRIIEIYPPKPLHSMAL
                     GSRIPALREDYKTGQLCGRYFLATVGKLLAATPPLLRHSSRIAVPETVVVPPAPVAND
                     THVAEVISAPQANDTTFTDEDLA"
     gene            6466..>7192
                     /locus_tag="MOX77_003977"
     CDS             6466..>7192
                     /locus_tag="MOX77_003977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HCA3359375.1"
                     /translation="MSWRFIDTHCHFDFPPFTGDERASIQRACEAGVEKIIVPATEAA
                     HFPRVLALAARFPSLYAALGLHPIVIERHADDDPDKLQQALAQQQNVVAVGEIGLDLY
                     RDDPQFARQERFLDAQLQLAKRYDLPVILHSRRTHDKLAMRLKRQSLPQTGVVHGFSG
                     SLQQAERFVQLGYKIGVGGTITYPRASKTRDVMARLPLDALLLETDAPDMPLKGFQGQ
                     PNRPEQAARVFDALCELRQEPAEV"
BASE COUNT         1648 a         1884 c         2025 g         1635 t
ORIGIN      
        1 aatggctggc cagcgcggcg gaaagcacgc cagcgccgca gccgacatcc agcactttac
       61 ctttggtgtg cggcgtcagc gtagacagca gcagttggct accaacatcc agtccgtcgc
      121 ggctgaatac gcccggcaac gttttgatgg tcagcccgtc gatattgtac tcggcccacc
      181 aggattcaag actaaactgc ggctgctttt ccagacgacc atggtaaagg ccgcaacgtc
      241 gcgcgctatc tactttgttc agcggcgcat agtccgccag catcggttcg gcgctacgca
      301 cgccgctgcg gttttctccc acgacgaaaa catcgctgcc caccggcatc agcgacaaaa
      361 tattcatcaa ctggaactgc gcttcgggtt tatttttcgg ccagtagtag atcagcgtat
      421 cgcagtcagc gacatcgctg gcttgcgcga ccaggctaaa acggacgtta tcgcccatct
      481 ggcggcttaa cgcctgccag tggtgaaact gttgcgtata cgcgcggctg gcggcgcatt
      541 caaagcgcgc gggcaggtca tcctgcaaat ctccggcaaa aagaatacgg ctttgttcga
      601 aatcatcact gtggcgcagc aagacttcac ttgccggggt aaaagcagac atggaatgct
      661 ccttaattca gactggcggc gattatagta gtttgatggc ggagattcga cagatttgct
      721 atatttgcgc ccctgattac aggagcgttt cgctatgaca tcccgacgag actggcagtt
      781 acagcaactg ggtattacgc agtgggcgct gcgacgtcct ggcgcgctac agggcgagat
      841 tgcgatttcc cttcccgcgc acgttcgtct gatcgtggtt gcagaggaat tacccgcgct
      901 gaacgagccg ctaatgcgcg atattttacg cgcgttgacc gtgagtcccg atcaggtttt
      961 accgctgacg cctgagcgcg tcgccatgct gccgcagggc agccgttgta atagctggcg
     1021 gttaggaact gacgcgccgc tccaactcga aggcgctcag gtcacgacgc cggcgtttaa
     1081 tgaactccgg gtaaacccgg cggcacgcgc cgcactatgg caacaaatct gcgaacatga
     1141 acacgatttc tatcctcagc acgaccgatc tccccgcagc ctggcagatt gagcaacgcg
     1201 ctcatgcgtt tccgtggagc gaaaaaacgt ttttcggcaa ccagggcgaa cggtatctca
     1261 actttaagct gactgctgat gacagaatgg ccgcgtttgc cattacacag gtggtgctgg
     1321 acgaagcgac gctgttcaat atcgccgtcg atccggattt tcagcgtcgg gggctggggc
     1381 gtatgctgct tgagcatctg attgatgaac tggaaaaacg cggtgttgta acgttatggc
     1441 tggaggtacg cgcctctaac gctgccgcca tcgcgctgta tgaaagtctg gggtttaacg
     1501 aggcgacgat tcgccgcaat tactatccca cggcacaagg gcatgaggac gccatcatca
     1561 tggcgttacc gataagcatg taataaaaga ggcaaggtgt aatgatgaag tgggactgga
     1621 ttttctttga tgccgatgaa acgctgttta cgtttgattc tttcaccggc ttacagcgga
     1681 tgttccttga ctatagcgtc acctttaccg ctgaggattt ccaggattac caggccgtga
     1741 ataagccgct atgggtggat tatcagaacg gcgcgattac ttcattacaa ttgcagcacg
     1801 cgcgctttca aagttgggct gaacggctaa acgttgcgcc ggggcggctg aatgacgctt
     1861 ttattagtgc gatggcggag atctgttctc ctttgccggg cgccgtttcg ctacttaatg
     1921 cgattcgcgg gcaggctaaa atcggtatta ttactaacgg ttttaccgcg ctacaacaaa
     1981 ctcgtctgga gcgcaccggg ctgcgcgagt atttcgatct gctggtgatt tccgagcagg
     2041 ttggcgtcgc gaagcccgat ccgaaaatct ttaactacgc cctggagcag gcggggaatc
     2101 ctgaccgctc gcgcgtatta atggttagcg ataccgcgga gtccgatatt cttggcggca
     2161 ttaacgccgg actgtcgacc tgctggctta acgcgcatca tcgcgagcag cccgcgggta
     2221 tccatccaac ctggactgtg gcgtcattaa gcgaactgga gcagctcctg tgtaaacact
     2281 gattgcctcc cccaggttga tgggtaaaat agccgcattt ttcgtattca acatgcgtgg
     2341 tcaaacgccg cgcttactca agaagatttg actatgacgt tgtctcctta tttgcaagag
     2401 gtggccaaac gccgcacttt tgccatcatt tctcacccgg acgccggtaa aaccaccatt
     2461 accgaaaaag tgttgctgtt cggacaggcg attcagaccg ccggtacggt aaaaggccgt
     2521 ggctccagcc aacatgcaaa atctgactgg atggagatgg aaaaacagcg tggtatctct
     2581 atcaccacct cggtgatgca gttcccgtat cacgattgtc tggtgaacct gctggacacc
     2641 ccggggcacg aagacttctc cgaagatacc taccgtaccc tgacggcggt ggactgctgt
     2701 ctgatggtga tcgacgccgc aaaaggtgtt gaagacagga ctcgtaagct gatggaagtt
     2761 acccgtctgc gtgatacgcc gatcctgacc tttatgaaca aactcgaccg tgacatccgc
     2821 gacccgatgg agctgctgga tgaagtggaa aatgagctga aaatcggctg tgcgccgatc
     2881 acctggccga ttggctgcgg caagctgttt aagggcgttt atcaccttta taaagatgaa
     2941 acttatctgt atcagaccgg taagggccac accattcagg aagtgcgcat cgttaaaggg
     3001 ctgaataacc cggatctgga cgccgccgtc ggtgaagacc tggcgcagca actgcgcgac
     3061 gagctggaac tggtgcaggg cgcatctaac gagtttgatg aagagctgtt cctggcaggg
     3121 gaaattaccc cggtattttt cggtaccgcg ctgggtaact ttggcgttga ccatatgctg
     3181 gatggtttag tggcgtgggc gcccgcgccg atgccgcgtc aaaccgatac ccgcacagtg
     3241 gaagcctcag aagagaggtt caccggtttt gtctttaaaa ttcaggccaa tatggacccg
     3301 aaacaccgcg accgcgtggc gtttatgcgc gtggtttccg gtaagtatga gaagggcatg
     3361 aagctacgcc aggtccgtac cggcaaagat gtggtgattt ccgacgcgtt aacttttatg
     3421 gcgggcgacc gttcgcacgt tgaagaagcg tacccgggcg atattttggg tctgcataac
     3481 cacggcacca ttcagatcgg cgataccttc acccagggcg agatgatgaa gtttaccggt
     3541 atcccgaact ttgcgccgga actgttccgt cgtattcgcc tgaaagatcc gctcaagcag
     3601 aagcagctac tgaaagggct ggtgcagctt tctgaagagg gggcggtgca ggtattccgt
     3661 cccatctcca acaacgatct gattgtcggc gccgtgggcg ttttgcagtt tgacgttgtt
     3721 gtcgcgcgcc tgaaaagcga atacaacgtt gaggcgattt atgaatccgt caacgtggcg
     3781 acggcgcgct gggtggaaag cgccgatgcg aagaaattcg aagagtttaa gcgtaagaat
     3841 gaaacgcagc tggcgctgga tggcggcgac aaccttacct atatcgcccc cacgatggtt
     3901 aacctgaacc tgacccagga acgttaccct gacgttcagt tccgtaaaac gcgcgaacac
     3961 tgatcccttt ccgggcgcgg catccgccgc gccttcgtac tttccctgcc tttttaaccg
     4021 cttacggaat gttcttaaat cccgcgtttt ttctccgatc tgcctgtttt ttatacgcac
     4081 cgacaagcga ttttaaaatt gtgatctata tttaacaaag tgatgacata aatgtcggct
     4141 ttaatgcctg ttcaatgcgt gaatatgaga gcttaaagct gagatttgtt tcagtcacga
     4201 tattaataac tgaaacggaa gggtggcagg cgacgcgtcg ttacaaattc acgaatgtga
     4261 tgccagtcat tgacttcaga aaccggtgag tttcaccgca ttcagcaatg caacctcgtg
     4321 ttgcctgagc tcaaattacg agcaaactat acaggacaaa atcgatgact atgacaagac
     4381 tgaagatttc taaaactctg ctggccgtaa tgttgacctc tgctgttgcg acaggttctg
     4441 cctttgcaga aaacgcaaca acggacaagg cgcaaagcgg aaccgaaacc gcagggcaaa
     4501 aagtcgatag ctctatgaat aaagtcggta acttcatgga tgacagcgct atcactgcga
     4561 aagtcaaagc tgcgctggta gaccatgaca atattaaaag caccgatatt tctgtcgaaa
     4621 ccaatcagaa agtcgtcacc ctgagcggct ttgtagaaag ccaggcgcag gctgaagccg
     4681 ccgtgaaagt ggcgaaaggc gtagaaggcg tgacctccgt tagcgacaaa cttcacgttc
     4741 gcgacaataa agaaggttcc gtgaaaggtt atgccggcga tacggccacg accagtgaag
     4801 tcaaagccaa gttgctggcg gacgatctcg tcccttcccg taaagtaaaa gtggaaacga
     4861 ccgatggcgt cgtacagctc tccggtactg ttgaaactca ggaacaaagc gaccgcgctg
     4921 aaagcatcgc gaaagccgtt gatggcgtaa aaagtgttaa aaacgatctg aaagttcagt
     4981 aattcgtcgt aattcgtcct cccgacgttt gtcgggaggc gtaatgtgca ccacactaaa
     5041 aatatcgcga atgagtagcc tgagcgctca tatttagcgg tcgacattaa ctatggtaaa
     5101 ggagaggctt atgtttcgtt ggggcattat atttctggtt atcgcgttaa ttgccgccgc
     5161 attgggtttt ggtggactgg ctggtacggc tgccggcgcg gcgaaaatcg tcttcgtcgt
     5221 cgggatcgtg ctcttcctgg tcagcctgtt catgggccgt aaacgaccct agcaggcagc
     5281 tgtaaagata tattgctatc aagccagtcc agcggactgg cttttacggt tttagccgtt
     5341 aacgttttgc attaccttgt cagcctggaa aaaaatgaaa aacaggaagg cagaggtggg
     5401 ccagcgaata ccggttacgc tcggcaatat tgcgccgtta tcattaacac cgttccggtc
     5461 aggccgtatg gcgctggtct gtgagggcgg ggggcagcgg ggcatcttta ccgcaggcgt
     5521 gctggatgag tttatgcgtg cgcagtttaa tcctttccat ctctacttcg gcacatcagc
     5581 cggtgcgcaa aatctctcgg cgtatctctg caaccagccc ggctacgggc gtaaagtcat
     5641 tatgcgctat accaccaggc gcgaattttt tgatccgctg cgatttgtac gcggaggaaa
     5701 ccttatcgac ctcgactggc tggtggagtc caccgccgcc cggatgccgc tgcagatgga
     5761 tacctcagcg cgcctgttcg acagcggaaa atccttttat atgtgcgcct gccgggggga
     5821 tgattacacg ccgggctatt tctcgccgac aaaacaaaac tggcttgata tcattcgcgc
     5881 ctccagcgcc ataccgggtt tctaccgtac cggcgttacg ttagagggca tcaactatct
     5941 ggacggtggc attagcgacg ccattccggt tcaggaggcg gcaaagcggg gggcgaaaac
     6001 cattgtggtg atccgcaccg taccctcgca aatgtattac acgccgcagt ggtttaagcg
     6061 tatggagcgc tggctgggag agagcagtct acagccgttg gtcaacctgg tgcagcatca
     6121 tgaaacgtcc tacagcgcga tccaacaatt tattgaaaag ccgccgggta agctgcggat
     6181 cattgaaatt tatccgccga aaccgctgca cagcatggcg ctgggcagcc gtatcccggc
     6241 gctgcgtgag gattacaaaa ccgggcaatt atgcgggcgt tatttccttg ccaccgttgg
     6301 taaattgctc gccgcaacgc cgcctctctt gcgccattcg tcgcggattg ccgtgccgga
     6361 aacggtggtc gtgcctccgg caccggtggc caatgatacg catgtggcgg aggtcattag
     6421 cgcgccgcag gcaaacgaca ccacatttac cgacgaggat ctggcgtgag ctggcgcttt
     6481 atcgatacgc attgccattt tgatttcccg ccctttacgg gcgatgagcg cgccagtatt
     6541 cagcgtgcct gtgaggcggg cgttgaaaaa atcatcgtgc cggcgaccga ggcggctcac
     6601 tttccccgcg tgctggcgct ggcggcgcgt ttcccgtcgc tttatgctgc gctgggattg
     6661 caccccattg tgattgagcg tcatgccgat gacgatcctg ataagctgca acaagcgctg
     6721 gcgcaacaac agaacgtcgt ggcggtaggc gagatcggtc tcgatcttta tcgcgacgat
     6781 ccgcagttcg ccaggcaaga gcgattttta gacgcgcaac tgcaactggc aaaacgctac
     6841 gatctgccgg tgatcctgca ctcgcggcgc acgcatgaca aactggcgat gcgcttaaag
     6901 cgccagagtt tgccgcaaac cggtgtggtg catggttttt ccggcagtct gcaacaggcc
     6961 gaacgttttg tgcaactggg ctataaaatc ggcgtcggcg gcaccatcac ctacccgcgc
     7021 gccagtaaaa cccgtgatgt tatggcgcgg ttgccgctgg acgcgctgtt gctggagacc
     7081 gatgcgccgg atatgccgct aaaggggttt caggggcagc cgaaccgccc ggagcaggcg
     7141 gcgcgcgtat ttgatgcgct ctgcgaatta cgtcaggagc ccgcagaggt ga
//
LOCUS       DAGWFR010000191         7101 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.194, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000191 DAGWFR010000000
VERSION     DAGWFR010000191.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 7101)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7101)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7101
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.194"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..228)
                     /locus_tag="MOX77_003978"
     CDS             complement(<1..228)
                     /locus_tag="MOX77_003978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SelA-like pyridoxal phosphate-dependent enzyme"
                     /protein_id="HCA3359376.1"
                     /translation="MTPNIYQQLGLKKVINACGKMTILGVSSVAPEVMQATARAASAF
                     VEIDALVEKTGELVSRYTGAEDSYITSCASAG"
     gene            complement(232..1092)
                     /locus_tag="MOX77_003979"
     CDS             complement(232..1092)
                     /locus_tag="MOX77_003979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462668.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system mannose/fructose/sorbose family
                     transporter subunit IID"
                     /protein_id="HCA3359377.1"
                     /translation="MMSSDVMQHELVERARESGALTKADITKAWFIYWLGAEVSSSYE
                     RLQSLIFCASMTPIIKKLYPQKEEQVEALKRHLNFFNSEQTFGAVIQGISIAMEEQKT
                     RGEPINDSSITGIKTGLMGPLAGMGDSIIWAAVMPLLIAIFIPFAANGSAMGGIIPLI
                     LYPAITLAISYGMVHKGYTLGRDSIIGLLQGGRIKELIYGANVLGLIMMGALSASYVK
                     ITTPLKISALKGSEVVVQQILDSIAPGLLPLAAVFAIYFYLVKKGPRYTTILLSIVAL
                     SIVCSLLGVL"
     gene            complement(1089..1838)
                     /locus_tag="MOX77_003980"
     CDS             complement(1089..1838)
                     /locus_tag="MOX77_003980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HCA3359378.1"
                     /translation="MDTLLFASLMGLYYWFARLRLGYTFSAMLLQPVVIAVFVGLLLG
                     NMQTAMIIGAGMQLVYLGVTSTPGGNVPSDPALAACISIPIAVKAGMDPNLAIALAIP
                     FGVIGVFLDQLRRTLNAAWVHMADKHAETANMAGIMRCAFLYPALLGLVLRFPVVFAA
                     NYFGQDVVESFLKLMPHWLTHSFEIMGGILPALGFAITIMVIGKKSLLPWFIGGFFAV
                     LYLKVDIMAMAIFGTCVAFLIKGLAKNEGAA"
     gene            complement(1984..2469)
                     /locus_tag="MOX77_003981"
     CDS             complement(1984..2469)
                     /locus_tag="MOX77_003981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system
                     mannose/fructose/N-acetylgalactosamine-transporter subunit
                     IIB"
                     /protein_id="HCA3359379.1"
                     /translation="MANIVLCRIDSRLIHGQVVTKWVGQSQANRIAVVSDELDADPFM
                     KNIYLMAAPPNIKVDCFGNQSFAAAWKENQLGDGNVLVLFPSLAAVQDAIQLGFDVTR
                     IQVGGLGGGPNRKAVFQNITLDEKDVGILNDLKNRGVQVFFQTIPEDKPQPLDDILKK
                     F"
     gene            complement(2480..2905)
                     /locus_tag="MOX77_003982"
     CDS             complement(2480..2905)
                     /locus_tag="MOX77_003982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HCA3359380.1"
                     /translation="MTTTQPLPHILLLTHGGWGQPLCNSLRMVTGEIKGVTEIALMPV
                     DTLGEFYQRVEAVVKTLPEGSLILTDFVGGTTSNVAARLSADYPVAVIAGLNASLLLE
                     ALDRREQGMLTACVDELVEAGRSSCLDVVAHVRQLQQSL"
     gene            complement(3127..5697)
                     /gene="dagR"
                     /locus_tag="MOX77_003983"
     CDS             complement(3127..5697)
                     /gene="dagR"
                     /locus_tag="MOX77_003983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014341510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator DagR"
                     /protein_id="HCA3359381.1"
                     /translation="MLGRQLEESEREVRSVADVLPHEEHYAPDDPFTSLIGYDRSLRD
                     AVEKGRAAVLYPHGLHVLLTGPSGVGKTFFAELMHRFACEQASGAIPPLVYFNCAEYA
                     HNPELLSSHLFGHRQGAFTGANEHKTGLVEQADGGYLLLDEVHRLSYEGQEKLFSILD
                     KGEYRPLGVSSQPRSISVRLICATTEPVGSALLRTFQRRIQVCIDLPGIRQRSVEEQI
                     ELIVGFLQRESRKIEHTVSIDKPLLLWLLNKPLEGNIGQLKSDIQFLCAQAWASGMTE
                     HNDTLQLDKRLAEMSVNPTPEQRLLVDTLFDGKARLNIDARTLPALKTSLATGAEIEE
                     SDLFYSFLTREYVNLRNSNVPPAETLAILKNKLSSIFEYGLYSRDSVAHPPRYGDQIE
                     ERVTLLIGCVEQVLGFSLPENLVNPLRKHFLALIGYVQRGLIPQLYSSSLILDRCKDE
                     YDNATLLCRKINELLHIQCPATEVVWLCLFLKECRHYRQRIDASPDCGVILIAHGATT
                     ATSQAQYVNRVLERELFSAIDMPFEQSVHDTLETLTQMIQTRQYRRLILLVGIGSLIH
                     FGSTISKLFQIDVLLMPNITLTSLLEVGLDLSYETSDLPQLTALLQSKNIPCQLCTPQ
                     QENGGKVLVISCITGMGTAEKIKKVLEESFGELMSQDTRMVILDYNEVRSLERVQQAL
                     NASERLAGIVGTFQPGLPDIPFISLEELFSEQGPELVLSLLTPDLSNAERRLEMERSA
                     MRFISALTMESIINHISVLNPQRILKEMEGVFNHLTSSLSLKPSRQVTLRFLIHCCCM
                     VERIVINRKPLQMALERQPNLDARAFSVIKSAFLPIEDAYAIRLSDAEYFYIYELLYS
                     "
     gene            complement(5669..5926)
                     /locus_tag="MOX77_003984"
     CDS             complement(5669..5926)
                     /locus_tag="MOX77_003984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014341509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HCA3359382.1"
                     /translation="MRRIEIVLGELERLTRGLCLADLAQETAFTAEAIGFNLGLARNS
                     VSKDLNQLWNDGLAIKSRGRPVYFLASPGAGNVAGTSAGRV"
     gene            6123..6416
                     /locus_tag="MOX77_003985"
     CDS             6123..6416
                     /locus_tag="MOX77_003985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3359383.1"
                     /translation="MKRKTLLLIATLVALPGVTYADSPFSSLQSAHEKNTILKDLRKM
                     CTPKGALTDEAWEKKIMASEGNQQHIREAMIAIERNNQHNYWQALGKVECPEM"
     gene            6522..>7101
                     /locus_tag="MOX77_003986"
     CDS             6522..>7101
                     /locus_tag="MOX77_003986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 1 protein"
                     /protein_id="HCA3359384.1"
                     /translation="MRYRFPDNFWWGSACSALQTEGDSLNGGKSQTTWDVWFERQPDR
                     FHQGIGPAETSTFYRHWKQDIALLKQLKHNSFRTSLSWARLIPDGVGEVNPQAVSFYN
                     HVIDELLAQGITPFITLFHFDMPMVMQEKGGWENRDVVEAFGRYAQTCFTLFGDRVKH
                     WFTFNEPIVPVEGGYLYDFHYPNVVDFKRAATV"
BASE COUNT         1675 a         2009 c         1854 g         1563 t
ORIGIN      
        1 acccgccgag gcgcacgagg tgatatagct atcttcagca cccgtatagc gagataccag
       61 ttcgccggtt ttttccacca gcgcatcaat ctcgacgaaa gcggaagccg cgcgcgcggt
      121 ggcctgcatg acctccggcg cgacgcttga gacgcccaga atggtcattt tgccgcaggc
      181 gttaatgacc tttttcaacc ccagttgttg atagatattc ggcgtcatga tttacagcac
      241 tcccaacaac gaacagacta tgctcagtgc gacaatcgac agcaaaatgg tggtgtagcg
      301 cggccctttt tttaccagat agaagtagat ggcgaatacc gccgccagtg gcagtaagcc
      361 cggcgcgata gagtcgagga tctgctgaac caccacttca gatcctttca aggcgctaat
      421 ttttaacggc gtggtgattt tgacgtagct ggcggaaagc gcgcccatca tgatcaaacc
      481 cagcacgttg gccccgtaga tcagttcttt gattcgcccc ccttgcagca ggccgataat
      541 cgaatcacgc cccagtgtat atcccttgtg gaccataccg tagctgatcg ccagggtgat
      601 cgccgggtag agaatcagcg ggataatacc gcccatcgcg ctgccatttg ccgcgaacgg
      661 aataaagatc gctatcaaca gcggcatcac cgccgcccag ataatcgagt cgcccatccc
      721 ggcaagcggc cccatcaggc ccgttttaat gccggtgata gacgagtcgt taatcggctc
      781 gccgcgcgtt ttttgttctt ccatggcaat agagatgccc tgaatcaccg cgccgaaggt
      841 ctgctcggag ttaaagaagt taaggtggcg ttttagcgct tctacctgct cctctttttg
      901 tgggtaaagt tttttgatga tcggcgtcat cgaggcgcag aaaatcaggc tttgtaagcg
      961 ctcataggag ctggaaacct cggcgcccag ccagtagata aaccaggctt tggtgatatc
     1021 tgctttggtc agcgccccgc tttcccgcgc gcgctcaacc agttcatgtt gcattacgtc
     1081 actgctcatc atgctgctcc ttcatttttc gccaggcctt taatcaagaa ggcgacacag
     1141 gtgccgaaga tggccatcgc catgatgtcg accttgaggt ataacaccgc gaagaacccg
     1201 ccgataaacc acggcaacag gctcttttta ccgatcacca taatggtgat ggcaaagccc
     1261 agcgccggca gaatgccgcc catgatttca aaggagtggg ttaaccagtg cggcatcagt
     1321 ttaaggaaac tttccaccac atcctggcca aagtagttag cggcaaagac caccgggaag
     1381 cgcagcacca gccccagcaa tgccgggtaa agaaaggcgc aacgcatgat gcccgccatg
     1441 tttgccgttt ccgcgtgttt atccgccata tgcacccagg cggcgttcag cgtgcgcctc
     1501 agctgatcga gaaacacgcc aatcacgcca aacgggattg ccagcgcgat cgccaggttt
     1561 gggtccatac cggccttcac cgcgatagga atggagatac aggccgccag cgccgggtcc
     1621 gacggcacgt tgccgcccgg cgttgaggtc acgcccaaat aaacgagctg catccctgcg
     1681 ccgatgatca tcgcggtctg catattgcca agcaaaagcc cgacaaatac cgcgatcacc
     1741 accggttgta acagcatcgc ggagaaggtg tagccgaggc gtaaacgggc aaaccagtaa
     1801 tacaacccca tcaggcttgc aaagagtaag gtatccatag tgttatccta tacacttcat
     1861 ccttcaggct gcctctttgt tggctgcctt cgctcacccc agtcacttac tttagtaagc
     1921 tccaggggat tcactcagtt gccgcctcga tgcatccaga atgattttgt gtctattaaa
     1981 gggttagaat tttttcagga tatcgtcgag cggctgcggc ttatcttccg gaatggtctg
     2041 gaaaaatacc tgaacgccac ggtttttcag gtcgttaaga atgccgacgt ctttttcatc
     2101 cagcgtaata ttctgaaaaa ccgccttgcg gtttggcccg ccgccgagac cgccaacctg
     2161 aatgcgggtg acgtcaaagc ccaattgtat ggcgtcctgc accgccgcca gtgagggaaa
     2221 aagcaccagc acgttaccgt cgccaagctg attttctttc catgcagcgg caaaactctg
     2281 gttgccgaag caatccactt tgatatttgg cggcgccgcc atcaggtaga tatttttcat
     2341 aaacggatcg gcgtccagtt catcactcac aacggctatc cggttcgcct gagattgtcc
     2401 gacccacttc gtgacaacct gtccatgaat gagacggctg tcgatgcggc ataaaacgat
     2461 attggccatg atgttttcct tagagtgatt gttgtagctg acgtacatgg gcgaccacat
     2521 ccaggcagct actgcgcccg gcctcaacta actcatccac gcaggcggtt agcatccctt
     2581 gttcgcgcct gtccagcgcc tccagcagta gcgacgcatt caatccggca atcaccgcca
     2641 ccggataatc ggcgcttagc cgcgccgcga cgttggacgt cgtgccgccg acaaaatccg
     2701 tcaggatcag cgagccttcc ggcagcgttt tcaccacggc ctcgacgcgt tgataaaact
     2761 cgcccagcgt atcgacaggc attagcgcga tttccgtcac gcctttaatt tcgcccgtga
     2821 ccatacgcag gctgttgcaa agcggttgtc cccagccgcc atgcgtcagc agcaggatgt
     2881 ggggcaacgg ttgtgtggta gtcaaaataa tggcctcctg gcgcaattac atgagaacac
     2941 cggcatatat tgcccggtgg cactgcgctt accggaccga caggacactc ccggtaggcc
     3001 ggataaggcg tttacgccgc tatccggcat aacgcatcat cagaagagca aaggttgtgc
     3061 cagaatttgt gtcacgcgag gaagaagaaa ggtctggcga ggcgcgaagc cccgccagta
     3121 aaaggattag ctatagagca gttcgtagat ataaaaatat tccgcatccg ataaacggat
     3181 ggcgtacgcg tcttcgatcg gcagaaaagc ggatttgatg acactaaacg cgcgcgcgtc
     3241 cagattcggc tgacgttcca gcgccatctg taacggtttt cggttaatca caatacgctc
     3301 taccatacag cagcagtgga tcaggaagcg cagtgtcacc tggcggcttg gtttcaggga
     3361 aagcgaagac gtcagatggt taaaaacgcc ctccatctct ttcagaatac gctgcgggtt
     3421 aagcacagaa atatggttga tgatgctctc catcgttagc gcgctgataa agcgcatcgc
     3481 gctgcgctcc atctccagac ggcgttcagc gttggacaga tcgggcgtta acaggctcaa
     3541 caccagttcc ggcccttgtt cggagaaaag ctcttccagc gaaataaacg gaatatccgg
     3601 cagccccggc tggaaagtgc cgacaatccc cgccagccgc tcgctggcat tcaatgcctg
     3661 ctgaacgcgc tccagacttc gtacctcgtt ataatcaagg atcaccatcc tggtgtcctg
     3721 cgacatcagt tcgccaaagc tctcctccag cacctttttg attttttccg ccgttcccat
     3781 gccggtaata caggagatga ccagcacttt gccgccgttc tcctgctgcg gcgtacaaag
     3841 ctggcagggg atatttttac tctgcaggag cgccgtcaac tgtggtaagt cgctggtttc
     3901 atagcttaaa tccagcccga cttccagtag actggtcagc gtgatattcg gcatgagcaa
     3961 aacatctatc tggaataatt tactgatggt gctgccgaaa tggatcaatg aaccgatgcc
     4021 caccaacagg ataagccgcc gatattggcg ggtttgaatc atttgggtca gcgtttccag
     4081 cgtgtcatgc accgactgtt caaacggcat gtcgatggcg ctgaacagct cgcgctccag
     4141 cacgcggttg acatattgcg cctgactggt ggcggtggtc gcgccgtgag cgatcaaaat
     4201 gaccccgcag tcggggctgg catcgatacg ctgacgataa tggcggcact ctttcaggaa
     4261 caggcatagc cagaccactt ccgtcgccgg acactgtata tgcagcagtt cgttgatttt
     4321 ccgacacagc agcgtggcgt tgtcatattc gtctttgcag cgatccagga tcaaactgga
     4381 agagtaaagc tgcgggatca ggccgcgctg cacgtagcct atcagcgcca ggaagtgttt
     4441 acgcagtggg ttaaccagat tttccggcag cgaaaagccc aacacctgct ctacgcagcc
     4501 aatcagcagc gtcacgcgct cttcaatctg gtcgccatag cgcggcggat gcgccacgct
     4561 gtcgcggcta tagagaccgt attcaaaaat cgagctgagt ttatttttca ggatcgccag
     4621 cgtctccgcc ggggggacgt tactgttgcg caaattaaca tactcgcgcg tcaggaagct
     4681 gtaaaagagg tcgctctctt caatttccgc cccggtcgcc agcgacgtct tcaatgcggg
     4741 cagcgtgcgc gcgtctatat ttagccgcgc tttaccgtca aacagagtat ccaccaatag
     4801 acgctgttcc ggcgtcgggt taaccgacat ctccgccagc cgtttatcca gctgtagcgt
     4861 gtcgttatgc tcggtcattc ccgatgccca cgcctgagcg caaagaaact gaatatcgct
     4921 ttttagctga ccgatattgc cttccagggg tttattcagc aaccagagca acaacggttt
     4981 atcaatgctg accgtgtgtt ctattttgcg gctttcccgc tgtaagaacc ccacgatcag
     5041 ttcgatctgt tcttcaacgg agcgctggcg aatgcccggc aaatcaatgc atacctgaat
     5101 acgccgctgg aaagtacgta acagcgccga cccgaccggt tcggtagtgg cgcaaatcag
     5161 gcgtaccgaa attgatcgcg gctggctgct cacgccgagc ggacggtact cgcctttatc
     5221 cagaatagaa aacagctttt cctgcccttc ataagacaga cggtgcacct cgtccagcaa
     5281 cagataacca ccgtccgcct gctccacgag gcctgtttta tgttcattcg cgccggtaaa
     5341 cgccccctgc cgatgaccaa acagatgcga ggagagcagt tccgggttat gggcgtattc
     5401 cgcgcagtta aagtagacca gcggcgggat agcgccgctc gcctgttcac aggcgaaacg
     5461 gtgcatcagt tccgcaaaaa aggttttacc gacgccggac ggcccggtaa gcagaacgtg
     5521 taaaccgtgc ggatagagca ccgccgcacg gcctttttct accgcatcgc gcaggctgcg
     5581 atcgtaacca atcaggctgg taaacggatc gtcgggcgcg taatgctctt catgcggcag
     5641 cacatccgcc accgaccgca cctcgcgttc agactcttcc agctgacgtc ccagcaacgt
     5701 ttccagcgcc tggcgatgcc aaaaaataga ccgggcggcc acggcttttg attgccaggc
     5761 cgtcattcca taactgattg agatctttgc tgacggagtt acgcgccagc ccaagattga
     5821 aacctatcgc ctccgccgta aacgccgtct cctgcgccaa atcggcaagg catagcccgc
     5881 gcgtcagccg ttccagctct cccagtacga tctcaatacg tctcattaca ctaccgctta
     5941 cgaaataaaa gagtagtcag aacatacact attctgccac gcaagaaagt gaaggcgcag
     6001 cgagaaaccg ccttcccact tttgcctgac ttcaacgcca acggatagca cgccccgatg
     6061 agtgaacgtc gcacggtcta cacttactct tgaaaaagtg caaaccgata aggataccgt
     6121 ttatgaaacg aaaaacgctt ctgcttattg ccacacttgt cgcgctaccg ggcgtcacgt
     6181 atgccgactc tccgtttagc tcactccagt cggcgcatga aaaaaatacg attttaaagg
     6241 atttgcgcaa aatgtgtacg cccaaaggcg cgctaaccga tgaagcctgg gagaaaaaaa
     6301 tcatggcaag cgaggggaac cagcagcata ttcgggaggc gatgatcgcg atagagcgca
     6361 acaatcagca taactactgg caggctctcg gcaaggtgga atgcccggag atgtagcaca
     6421 gcttttccgc tttttggtcg cgaaaatgcg gactgtaacc ggtttctgtt cgccaaaagc
     6481 gcatattctg gagcgaattt acgcgatcaa ggagtacgac aatgcgatac cgttttcccg
     6541 ataacttctg gtggggcagc gcctgctcag cgttgcaaac cgaaggggat agtctgaatg
     6601 gtggtaaaag ccagaccacg tgggatgtgt ggttcgagcg ccagcctgat cgttttcatc
     6661 agggcatcgg tccagcggaa acctcaacgt tctatcgcca ctggaagcaa gacatcgcgc
     6721 tactgaaaca gttaaaacac aacagttttc gcacctcgct aagctgggcg cggctcattc
     6781 cagacggtgt aggcgaggtg aatccacaag cggtgagctt ctacaatcac gtcatcgacg
     6841 agctactggc gcagggcatc acgccgttta ttacgctgtt ccattttgat atgccgatgg
     6901 tcatgcagga gaaaggcggc tgggaaaatc gcgacgtcgt agaggcgttt ggtcggtacg
     6961 cgcaaacgtg ttttaccttg tttggcgacc gcgtgaagca ctggtttacc tttaacgagc
     7021 cgattgtgcc ggtggaaggc ggctatttgt acgacttcca ctatcccaat gtggtggatt
     7081 ttaaacgtgc ggccaccgtg g
//
LOCUS       DAGWFR010000192         7055 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.195, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000192 DAGWFR010000000
VERSION     DAGWFR010000192.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 7055)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7055)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7055
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.195"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..351)
                     /locus_tag="MOX77_003987"
     CDS             complement(<1..351)
                     /locus_tag="MOX77_003987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HCA3359385.1"
                     /translation="MATRIEFHKHGGPEVLQTVEFTPTEPAEHEIQVENKAIGINFID
                     TYIRSGLYPPPSLPAGLGTEAAGVVSKVGSGVEHIRVGDRVVYAQSTLGAYSSVHNVP
                     ADKAAILPDAISFEQ"
     gene            416..1831
                     /gene="dnaB"
                     /locus_tag="MOX77_003988"
     CDS             416..1831
                     /gene="dnaB"
                     /locus_tag="MOX77_003988"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HCA3359386.1"
                     /translation="MAGNKPFNKPQTDARDRDPQVAGIKVPPHSIEAEQSVLGGLMLD
                     NERWDDVAERVVAEDFYTRPHRHIFTEMGRLQESGSPIDLITLAESLERQGQLDSVGG
                     FAYLAELSKNTPSAANISAYADIVRERAVVRDMIAVAHEIADAGYDPQGRNSDELLDL
                     AESRVFQIAENRANKDEGPKSIDQILDATVARIEQLFQQPHDGVTGVDTGYQDLNKKT
                     AGLQRSDLIIVAARPSMGKTTFAMNLCENAAMLQDKPVLIFSLEMPGEQIMMRMLASL
                     SRVDQTRIRTGQLDDEDWARISGTMGILLEKRNMYIDDSSGLTPTEVRSRARRIFREH
                     GGLSLIMIDYLQLMRVPSLSDNRTLEIAEISRSLKALAKELQVPVVALSQLNRSLEQR
                     ADKRPVNSDLRESGSIEQDADLIMFIYRDEVYHENSDLKGIAEIIIGKQRNGPIGTVR
                     LTFNGQWSRFDNYAGPQYDDE"
     gene            1863..2942
                     /gene="alr"
                     /locus_tag="MOX77_003989"
     CDS             1863..2942
                     /gene="alr"
                     /locus_tag="MOX77_003989"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HCA3359387.1"
                     /translation="MQAATVVINRRALRHNLQRLRELAPASKLVAVVKANAYGHGLLE
                     TARTLPDADAFGVARLEEALRLRAGGITQPILLLEGFFDAADLPTISAQCLHTAVHNQ
                     EQLAALEAVELAEPVTVWMKLDTGMHRLGVRPEEAEAFYQRLTHCKNVRQPVNIVSHF
                     ARADEPECGATEHQLDIFNAFCQGKPGQRSIAASGGILLWPQSHFDWARPGIILYGVS
                     PLEHKPWGPDFGFQPVMSLTSSLIAVRDHKAGEPVGYGGTWVSERDTRLGVVAMGYGD
                     GYPRAAPSGTPVLVNGREVPIVGRVAMDMICVDLGPNAQDNAGDPVVLWGEGLPVERI
                     AEMTKVSAYELITRLTSRVAMKYID"
     gene            3128..4321
                     /gene="tyrB"
                     /locus_tag="MOX77_003990"
     CDS             3128..4321
                     /gene="tyrB"
                     /locus_tag="MOX77_003990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid transaminase"
                     /protein_id="HCA3359388.1"
                     /translation="MFQKVDAYAGDPILSLMERFKDDSRHDKVNLSIGLYYNEDGIIP
                     QLKTVAEAEARLNAQPHGASLYLPMEGLNTYRHTIAPLLFGADHPVLQQQRVATIQTL
                     GGSGALKVGADFLKRYFPDAGVWVSDPTWENHIAIFAGAGFEVSTYPWYDDATNGIRF
                     NDLLATLNTLPARSIVLLHPCCHNPTGADLTPSQWDAVIEIVKARDLIPFLDIAYQGF
                     GAGMDEDAYAIRAIASAGLPALVSNSFSKIFSLYGECVGGLSVVCEDAEIAARVLGQL
                     KATVRRIYSSPPCFGAQVVATVLGDEALKASWLAEVDAMRTRIISMRQTLVKELKAEM
                     PDRNFDYLLQQRGMFSYTGLSAEQVDRLRDEFGVYLIASGRMCVAGLNASNVHRVAKA
                     FAAVM"
     gene            4508..5221
                     /gene="aphA"
                     /locus_tag="MOX77_003991"
     CDS             4508..5221
                     /gene="aphA"
                     /locus_tag="MOX77_003991"
                     /EC_number="3.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid phosphatase AphA"
                     /protein_id="HCA3359389.1"
                     /translation="MKKITLALSAVCLLFTLNHSANALVSSPSTLNPGTNVAKLAEQA
                     PVHWVSVAQIENSLTGRPPMAVGFDIDDTVLFSSPGFWRGKKTYSPDSDDYLKNPAFW
                     EKMNNGWDEFSIPKEVARQLIDMHVRRGDSIYFVTGRSQTKTETVSKTLADNFHIPAA
                     NMNPVIFAGDKPGQNTKVQWLQEKNMRIFYGDSDNDITAARDCGIRGIRILRAANSTY
                     KPLPQAGAFGEEVIVNSEY"
     gene            5350..5766
                     /locus_tag="MOX77_003992"
     CDS             5350..5766
                     /locus_tag="MOX77_003992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjbQ family protein"
                     /protein_id="HCA3359390.1"
                     /translation="MWYQRTITLSEKPRGFHLITDEITDKLSGLPPVETGLLHLLLLH
                     TSASLTLNENCDPTVRADMERHFLKTVPDNAAYEHDYEGADDMPSHIKSSVLGVSLLL
                     PVRQGRLQLGTWQGIWLGEHRIHGGPRKIIATLQGE"
     gene            5769..6125
                     /locus_tag="MOX77_003993"
     CDS             5769..6125
                     /locus_tag="MOX77_003993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HCA3359391.1"
                     /translation="MTISELLQYCMAKPGAEQSVHSDWKATQIKVEDVLFAMVKEVDG
                     RPAASLKTSPELAELLRQQHSDVRSSRHLNKAHWSTVYLDGSLPDSQLYYLVDASYQQ
                     AVNALSEDKRKQLPQS"
     gene            complement(6126..6464)
                     /locus_tag="MOX77_003994"
     CDS             complement(6126..6464)
                     /locus_tag="MOX77_003994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3359392.1"
                     /translation="MASINEIRNLFTAARAEHPVASSAIAEFIQTYKQAREDSDDGIR
                     ESAAFIARALQEHARGWLDDDDMIILLEGQRDLARLRANNAQIALGSRIRSTVIHLID
                     IALALLVGAL"
     gene            complement(6451..6906)
                     /locus_tag="MOX77_003995"
     CDS             complement(6451..6906)
                     /locus_tag="MOX77_003995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3359393.1"
                     /translation="MENTMKLPYAITLLLCLFLAACTLPDRFSAVAFQQLTLLQARST
                     RFLQDAARIPWQKETLLKDDRDIRQTFFQAERVARQGGDKHRLDNLALLKNHYLRLYA
                     RVMKCKQPLTYIQAERYQQQNNQVWKLAIQGECLHWGARCTQGEENGVY"
BASE COUNT         1589 a         1806 c         1997 g         1663 t
ORIGIN      
        1 ctgttcgaaa gaaatggcgt caggcaaaat cgcggcttta tctgcgggga cgttatggac
       61 ggaactgtaa gcgccgagcg ttgactgcgc gtagacgacg cgatcgccca cgcgaatgtg
      121 ctccacgccg ctgccgactt tactgaccac acccgcagct tcggttccca ggcccgcagg
      181 caacgacggg ggcggataga gtccgctacg gatataggtg tcgatgaagt tgataccaat
      241 ggctttgttc tcaacctgga tttcgtgttc cgccggttcc gttggcgtaa actccacggt
      301 ctgaagcact tccggaccac catgcttgtg aaattcaata cgcgttgcca tgcttcctcc
      361 aaaagaaatg tggtaatctt tcgacccaat cactatctcg gtaactccat tcactatggc
      421 aggaaataaa cccttcaaca aaccacagac tgatgcccgc gaccgcgatc cgcaggttgc
      481 cgggataaaa gtgccgccgc actcgattga agcggaacag tcggtgttgg gcggtttaat
      541 gctggataac gagcgctggg acgatgtggc cgagcgcgtg gtggcggaag atttctatac
      601 ccgcccgcat cgccatatct ttacggagat ggggcgcttg caggaaagcg gcagtcctat
      661 cgacctgatt acgctcgcgg aatcgctgga gcggcagggc caactggaca gcgtcggcgg
      721 tttcgcctat ctggcggagc tgtctaaaaa cacgccaagc gcggcgaata tcagtgctta
      781 tgcggacatt gtgcgcgaac gcgccgtggt ccgcgatatg atcgcggtgg cgcatgaaat
      841 tgcggacgcc ggttacgatc cacaggggcg caatagcgac gaactgctgg atctggcgga
      901 gtcgcgcgtc ttccagatcg cggaaaaccg ggccaacaaa gacgaaggtc cgaaaagcat
      961 cgaccagatt ctcgacgcca ccgtggcgcg tattgagcag ttgttccagc aaccgcacga
     1021 tggcgttaca ggcgtggata ccggctatca ggatctcaat aaaaagacgg caggattaca
     1081 gcgttcggat ttgattatcg tcgcggcgcg tccctccatg ggtaaaacca cttttgcgat
     1141 gaacctctgc gaaaatgcgg cgatgttgca ggataaacca gtactgatct tcagcctgga
     1201 gatgcccggc gaacagatca tgatgcgtat gctggcctcg ctgtcccgcg tcgatcagac
     1261 acgtattcgt accggtcaac tcgatgatga agactgggcg cgaatctccg gcacgatggg
     1321 cattctgctg gagaaacgca atatgtatat tgacgactcc tcaggtctta cgccgacaga
     1381 agtccgttcg cgcgcgcggc gtattttccg cgaacatggc gggttaagtc tgattatgat
     1441 cgactacctg caattgatgc gtgtgccgtc gctttctgat aaccgtactc tggaaatcgc
     1501 cgaaatttct cgctcgttga aagcgctggc gaaggaactc caggtgccgg tcgtggcgct
     1561 atcgcagctt aaccgctccc tggaacaacg cgcggataaa cgtccggtga actccgacct
     1621 gcgtgaatcc ggctctattg aacaggatgc cgacttaatt atgtttatct accgtgatga
     1681 ggtttatcac gagaacagcg acttaaaagg cattgctgaa attattattg gtaagcagcg
     1741 taacggtcct atcggtacgg ttcgtctgac gttcaatggt cagtggtcgc gcttcgataa
     1801 ctatgcggga ccgcaatacg atgatgagta actctccgtc attcttttaa caaggaattc
     1861 aaatgcaagc ggcaacagtc gtcattaacc gccgcgctct gcgacacaac ctgcaacgtc
     1921 tgcgtgaact ggcgcctgcc agtaagctgg ttgcggtggt gaaagcgaac gcttatggac
     1981 acggtcttct ggagaccgcg cgaacgctcc ctgatgctga tgcttttggc gtggcgcgtc
     2041 ttgaagaggc tctacgtctg cgagcgggcg ggattacgca gcctatcctg ctgctggagg
     2101 gttttttcga cgccgccgat ttgcctacca tttccgcgca atgtctgcat accgccgtac
     2161 ataatcagga gcagcttgcc gccctggagg cggtggagct ggcggagccg gtaacggtct
     2221 ggatgaagct ggataccggt atgcatcgtc tcggcgtgcg tcccgaagag gcggaggcgt
     2281 tctaccagcg tctgacgcac tgtaaaaatg tacgccagcc ggtgaatatc gtcagccatt
     2341 ttgcccgtgc ggatgagccg gaatgcggcg ctaccgaaca tcagctcgac atttttaatg
     2401 ccttctgtca gggtaaaccc ggtcagcgct ctattgccgc gtctggcggt atcctgctgt
     2461 ggccgcagtc tcactttgac tgggcgcgtc cgggcatcat tttgtatggc gtatcgccgc
     2521 tggagcacaa accttggggg ccggattttg gttttcagcc ggtgatgtcc ttaacttcca
     2581 gtttgatcgc ggtgcgtgac cacaaagcgg gcgaaccggt gggctacggc gggacatggg
     2641 tgagtgagcg cgacacgcgc ctgggcgtgg tggcgatggg ttatggcgat ggctacccac
     2701 gagcggcgcc ttccggtacg ccagtactgg tcaatggtcg tgaagtcccg attgtcgggc
     2761 gggtggcgat ggatatgatt tgcgtggatt tggggccaaa cgcgcaggat aacgcgggcg
     2821 atccggtggt cttatggggt gaaggtctgc cggttgaacg tatcgctgaa atgacaaaag
     2881 taagtgctta cgaacttatt acgcgcctga cctcaagggt ggcaatgaag tatattgatt
     2941 aaatgcgcgg cgggccgggt ggcgcttgcg cttatccggc ttgtatcgcg catgggctgc
     3001 aggccggata agacgttcac gccgtcatcc ggtaatatgc gcatccacca caacatcctc
     3061 tcgatcttct cgtccttccg gtttattgtg ttatttcctg ccctctgtaa acctggagaa
     3121 ccatcgcgtg tttcaaaaag ttgacgccta tgccggcgat ccgattcttt cactgatgga
     3181 gcgttttaaa gacgactccc gtcacgacaa agtaaatctg agcattggcc tgtattacaa
     3241 cgaagacggg attatcccac agctcaaaac ggtggccgaa gccgaagccc ggcttaacgc
     3301 gcagccgcat ggcgcctcgc tgtacctgcc gatggaagga ctcaatactt atcgccatac
     3361 tatcgcgcct ttgctctttg gcgccgatca cccggttctt cagcaacagc gcgtggccac
     3421 tatccagaca ttaggtggtt caggcgcgct gaaagtgggc gcggattttc tgaagcgtta
     3481 tttccccgac gcaggcgtat gggtgagcga ccctacctgg gaaaaccata ttgcgatatt
     3541 tgccggggca ggattcgaag tgagtactta cccctggtat gacgacgcga ctaacggcat
     3601 ccgttttaac gatctgctgg ccacgctgaa tacgttacct gcgcgcagta tcgtgctgct
     3661 gcacccctgt tgtcacaacc cgaccggggc ggatttaacg ccttcgcaat gggatgcggt
     3721 gattgagata gtgaaagcgc gcgatctgat tccgttcctt gatattgcct atcaggggtt
     3781 tggcgcaggc atggacgagg atgcttacgc tattcgcgcc attgccagcg ccgggttacc
     3841 tgcgttagtc agtaattctt tttcgaagat tttctcgctg tatggcgagt gcgtcggcgg
     3901 cctgtcggtg gtgtgtgaag atgccgaaat cgccgcgcgg gttctgggac agctaaaagc
     3961 gacggtgcgc cgaatttact ccagtccgcc gtgtttcggc gctcaggtgg tcgctacggt
     4021 cctgggcgat gaggcgttaa aagcgagctg gctggcggaa gtcgacgcga tgcgtacccg
     4081 cattatatcg atgcgccaga cgctggtgaa agagctgaag gcggagatgc ctgaccgcaa
     4141 cttcgattac ttgttacagc agcgtggtat gttcagctat accgggttaa gcgcggagca
     4201 ggtcgatcgg ttgcgcgatg agtttggcgt ttacctgatt gccagtggcc gcatgtgtgt
     4261 cgctgggctt aatgcttcaa atgtacaccg cgtggcgaag gcatttgccg ctgtcatgta
     4321 atattcaggc cggacggcga taacagtgct ctccggtctg acaatagctg ttgtgatcat
     4381 cctctttttt cgtaacaaaa ccgcaaataa tccttccttt tgaccgttac tggcgttatg
     4441 gtcagatagt tttttgacca aagactcatc ttaataatta taatattttg aattttaagg
     4501 gaaaagcatg aaaaaaataa ccctggcgct gagcgccgtc tgtttattgt ttacgctaaa
     4561 ccattccgcg aatgcgttag tatcttcccc ttcgacgctc aatccgggca ctaatgttgc
     4621 aaaactcgcg gaacaagcac ctgtccattg ggtctctgtc gcccagattg aaaacagcct
     4681 gaccggacgc ccgccgatgg cggtcggctt tgatattgac gacaccgtgt tattttccag
     4741 ccccggattc tggcgcggaa agaaaaccta ttccccggac agcgacgatt atctgaaaaa
     4801 tccggccttt tgggaaaaaa tgaacaacgg ctgggatgag ttcagtattc caaaagaagt
     4861 ggcccgacag ctcattgata tgcatgttcg ccgtggcgac agtatttact ttgtcactgg
     4921 tcgtagtcag acgaaaacgg aaactgtgtc gaaaacgctg gcggataact tccatattcc
     4981 ggcggcgaat atgaatccgg tgattttcgc cggcgataaa ccgggacaaa atacgaaagt
     5041 ccagtggctg caggagaaga acatgcgtat cttctacggc gattcggata acgatattac
     5101 cgcagctcgt gattgtggta tccgcggtat tcgtatcctg cgcgcggcta actccaccta
     5161 caaaccgctg ccgcaggcag gagcgtttgg cgaggaagtc attgtcaact cggagtacta
     5221 aaaatcagga gagcgacagg ctctcctttt ttgcatgatt tttgcacaaa cttgccccgc
     5281 tggcttttac cttttccaga cttgctgcac actattcagg agacgtttgt ttttaggaag
     5341 gagcagccta tgtggtatca gcgcaccatt acactgagcg agaagccgcg cgggtttcat
     5401 ctaataacag atgaaattac cgataaattg tctggcttac cgcctgtcga aacgggtttg
     5461 ctgcatctgt tgttgctaca tacctcggcc tcgctgacgt taaacgaaaa ctgcgatccc
     5521 accgtgcgcg ctgatatgga gcgccatttc ctgaaaaccg ttcccgataa tgcggcgtat
     5581 gaacatgatt acgaaggggc ggatgacatg ccttcgcata ttaagtcgtc agtattgggc
     5641 gtctcgttgc tgctgcctgt acgccagggg cgtttacagt taggaacatg gcaaggtatc
     5701 tggttgggag agcaccgtat tcacggcggt ccacgtaaaa tcatcgcgac actacaaggg
     5761 gaatgataat gaccatttcg gaattactgc aatactgcat ggcaaaacct ggcgcagagc
     5821 agagcgttca cagcgactgg aaagcgacgc aaattaaagt ggaagatgta cttttcgcga
     5881 tggtaaaaga agttgatggg cgcccggcag cctctctcaa aaccagcccg gaactggcag
     5941 agttgttacg ccagcagcac agcgatgttc gatcgagtcg gcaccttaat aaagcgcact
     6001 ggagtacggt ctatctggac ggctcgctgc cggattcaca actctattat ctggtcgatg
     6061 cctcttatca acaggcggta aatgcgctgt cggaagataa acgcaagcag ttgccgcagt
     6121 cctgattata gcgcgccgac caacaacgcc agggcgatat caatgaggtg gatgaccgta
     6181 gaccggatac ggctgccgag ggcaatttgc gcattattgg cgcgtagcct ggcgaggtcc
     6241 cgctgtcctt ccagcagaat aatcatatcg tcgtcgtcca gccagccgcg agcatgttcc
     6301 tgaagcgcgc gggcgataaa cgcggcggac tcgcggatac cgtcgtcgct gtcttctctt
     6361 gcctgcttat acgtctggat aaactcggca attgccgagg aggctacagg atgttcggcc
     6421 cgggcggcag taaacaggtt acgtatttcg ttaatagacg ccattttctt ctccctgagt
     6481 gcagcgggcg ccccaatgca gacactcacc ctgtatggct aatttccaga cctgattatt
     6541 ttgctgttgg tatctctcag cctggatgta agtaagtggt tgcttacatt tcataacccg
     6601 cgcataaaga cgcaaatagt gatttttcag cagcgccaga ttatcgagtc ggtgtttatc
     6661 cccaccttga cgggcgaccc gctcagcctg aaaaaatgtc tggcggatat cgcggtcatc
     6721 tttgagcagt gtctcttttt gccacggtat tcgcgccgcg tcctgcagga agcgggttga
     6781 gcgcgcttgt aatagcgtca gttgttgaaa agccacggcg ctaaagcggt caggcagcgt
     6841 acaggcggct aaaaacaggc acagcagtag tgtgattgcg tagggcaact tcatggtgtt
     6901 ttccataaca gaccgtttgc gctatcacat gtcagagcga ggcggcacgc aaatcacaaa
     6961 tgctcaacac ggatacaatg aggtgggatg aggaaaaatg atgccgcttc ccggcgaatc
     7021 ggaaagcggt gtgaaggtta tttgagcata ggttt
//
LOCUS       DAGWFR010000193         6881 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.196, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000193 DAGWFR010000000
VERSION     DAGWFR010000193.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 6881)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6881)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6881
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.196"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..162)
                     /locus_tag="MOX77_003996"
     CDS             complement(<1..162)
                     /locus_tag="MOX77_003996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HCA3359394.1"
                     /translation="MIAMILVHPHIFWLSLGGLLLAAEMLGGNGYLLWSGVAAVITGL
                     TVWLLPLGWE"
     gene            complement(159..1076)
                     /locus_tag="MOX77_003997"
     CDS             complement(159..1076)
                     /locus_tag="MOX77_003997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH/Band 7/PHB domain protein"
                     /protein_id="HCA3359395.1"
                     /translation="MLILIPILIFVALVIVGAGVKIVPQGYQWTVERFGRYTKTLQPG
                     LSLVVPFMDRIGRKINMMEQVLDIPSQEVISKDNANVTIDAVCFIQVIDAPRAAYEVS
                     NLELAIINLTMTNIRTVLGSMELDEMLSQRDSINARLLHIVDEATNPWGIKVTRIEIR
                     DVRPPAELISSMNAQMKAERTKRAYILEAEGVRQAEILKAEGEKQSQILKAEGERQSA
                     FLQAEARERSAEAEARATQMVSEAIAAGDIQALNYFVAQKYTEALQQIGSANNSKVVM
                     MPLDASSLMGAIAGISELVKDSASERKKA"
     gene            1223..1900
                     /gene="fetA"
                     /locus_tag="MOX77_003998"
     CDS             1223..1900
                     /gene="fetA"
                     /locus_tag="MOX77_003998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter ATP-binding protein FetA"
                     /protein_id="HCA3359396.1"
                     /translation="MTKRSMLLELKQVGYQTATTKIVNNISFTLQRGEFKLITGPSGC
                     GKSTLLKMVASLISPDIGVILFEGRDITTLSPEAYRQQVSYCAQTPALFGDTVYDNLI
                     FPWQIRHQRPQPTAFADDLARFELPETILQKPIAALSGGEKQRIALIRNLQFLPKILL
                     LDEITSALDEHNKRNVNDIIHRYVRDKQVAVLWVTHDKDEIQHADKVITLTPSAGEMQ
                     EARYERA"
     gene            1887..2666
                     /gene="fetB"
                     /locus_tag="MOX77_003999"
     CDS             1887..2666
                     /gene="fetB"
                     /locus_tag="MOX77_003999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron export ABC transporter permease subunit
                     FetB"
                     /protein_id="HCA3359397.1"
                     /translation="MNEHNITNTSLALSMLLVVVAMLISHKEKLALEKDILWSVCRAV
                     IQLIIVGYVLKYIFGVNHAALTLLMVLFICFNAAWNAQKRSKYIDKAFLSSFIAITVG
                     AGLTLTVLVLTGSIEFAPMQVIPIAGMVAGNAMVAVGLCYNQLGLRFHSEQQQIQEKL
                     SLGATPKMASAGLIRDSIRASLIPTIDSAKTVGLVSLPGMMSGLIFAGIDPVKAIKYQ
                     IMVTFMLLSTASLSTIIACYLTYRKFYNSRHQLVVMPLKKS"
     gene            complement(2752..3606)
                     /gene="cnoX"
                     /locus_tag="MOX77_004000"
     CDS             complement(2752..3606)
                     /gene="cnoX"
                     /locus_tag="MOX77_004000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperedoxin"
                     /protein_id="HCA3359398.1"
                     /translation="MSVQNIVNINESNLQQTLEQSMTTPVLFYFWSERSQHCLQLTPV
                     LESLAAQYHGQFILAKLDCDAEQMIAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAI
                     RALLDKVLPREEELKAQQAMQLMQEGNYVDALPLLKDAWQLSSQNSEIGLLLAEAQIA
                     LNRSEEAEAVLKTIPLQDQDTRYQGLVAQIELLKQAADTPEIQQLQQQVADNPQDAAL
                     ATQLALQLHQVGRNEEALELLFSHLRKDLAAAEGQTRKTFQEILAALGTGDALASKYR
                     RQLYALLY"
     gene            complement(3666..4436)
                     /locus_tag="MOX77_004001"
     CDS             complement(3666..4436)
                     /locus_tag="MOX77_004001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HCA3359399.1"
                     /translation="MQKSVLITGCSSGIGLDSALELKRQGFQILAGCRKPDDVARMNS
                     MGFTGVLIDLDSPESVDRAADEVIALTDNRLYGIFNNAGYGVYGPLSTISREQMEQQF
                     SSNFFGAHQLTMRLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDAL
                     RMELRHTGIKVSLIEPGPIRTRFTDNVNQTQRDKPVENPGIAARFTRDPDAVVAKVRH
                     AFASDKPRLRYPVTLVTWAVMALKRILPGRMLDKILQS"
     gene            complement(4591..5205)
                     /gene="tesA"
                     /locus_tag="MOX77_004002"
     CDS             complement(4591..5205)
                     /gene="tesA"
                     /locus_tag="MOX77_004002"
                     /EC_number="3.1.1.5"
                     /EC_number="3.1.2.14"
                     /EC_number="3.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional acyl-CoA thioesterase I/protease
                     I/lysophospholipase L1"
                     /protein_id="HCA3359400.1"
                     /translation="MNFNTVFRWHLPFLFLILLTFRAAAADTLLILGDSLSAGYRMTA
                     SAAWPSLLNDKWQNKTSVVNASISGDTSQQGLARLPALLQQHHPRWVVVELGGNDGLR
                     GFAPAQTEQTLRKIIQTVKAADAQPLLMQIHLPANYGRRYNESFSAIYPKLAKEFDIP
                     LLPFFMEEVYLKPQWMQDDGIHPNRDAQPFIADWMAKQLTPFLS"
     gene            5176..5862
                     /locus_tag="MOX77_004003"
     CDS             5176..5862
                     /locus_tag="MOX77_004003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCA3359401.1"
                     /translation="MPAENSVEVHRLRKSVGQGEHELSILTGVELVVKRGETIALIGE
                     SGSGKSTLLAILAGLDDGSSGEVSLVGKPLHQMDEEARAQLRAQHVGFVFQSFMLIPT
                     LNALENVELPALLRGENSGQSKAGAKALLEQLGLGKRLDHLPAQLSGGEQQRVALARA
                     FNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDPALAARCDRRLR
                     LVNGQLQEEA"
     gene            5859..>6881
                     /locus_tag="MOX77_004004"
     CDS             5859..>6881
                     /locus_tag="MOX77_004004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCA3359402.1"
                     /translation="MIARWFWREWRSPSLIIVWLALSLAVACVLALGSISDRMEKGLS
                     QQSREFMAGDRTLQSSREVPKAWLEEARKRGLNVGEQLTFATMTFAGDTPQLASVKAV
                     DSVYPMYGELQTRPGGVKPQPGSVLLAPRLMALLNLKTGDTIDVGDVTLRIAGEVVQE
                     PDSGFNPFQMAPRLMMNMADVAKTGAIQPGSRVMWRYKFGGTPQQLAGYESWLLPQLK
                     PEHRWYGLEQDDGALGKSLERSQQFLLLSALLTLLLAVAAVAVAMSHYCRSRYDLVAI
                     LKTLGAGRAQLRKLIIGQWLMVLGLSAVTGGAIGLLFENILLVLLKPVLPADLPPASL
                     WPWLWAL"
BASE COUNT         1528 a         1793 c         1933 g         1627 t
ORIGIN      
        1 ttcccagccg agcggtaaga gccagacggt taagccggta atcactgccg ccacgccgct
       61 ccacagcaaa tagccgttac cgccgagcat ttccgcagcc aacaacaggc cgccgaggct
      121 aagccagaag atatgtggat gtaccagaat catcgctatc atgctttttt ccgttcgctg
      181 gcgctgtcct taaccagctc gctgatcccg gcgatagcgc ccatcagact gctggcatcc
      241 agcggcatca tgaccacttt gctgttattc gccgagccga tttgctgtaa cgcttcggtg
      301 tatttctgcg ccacgaagta gtttaacgcc tgaatatccc cggcggcgat ggcttcagac
      361 accatctgcg tagcgcgggc ttccgcttcg gcggaacgtt cgcgcgcttc cgcctgcagg
      421 aaagcggact gacgttcgcc ttcggctttc agaatctgcg actgtttttc cccctcggct
      481 ttcaggattt ccgcctgacg caccccttcg gcctcaagga tataggcgcg tttggtacgt
      541 tccgctttca tctgggcgtt catcgaggag atcaattccg cgggcggacg gacatcgcga
      601 atttcgatac gggtaacttt aattccccac ggattggtgg cttcatcgac aatatgcagc
      661 agccgcgcgt tgatgctgtc gcgctgggag agcatttcat ccagctccat cgaaccgagc
      721 accgtacgga tattggtcat ggtcaggtta atgatcgcca gttccaggtt actgacttca
      781 taagcggcgc gcggcgcatc gataacctga ataaaacaga ccgcatcgat agtgacgttg
      841 gcgttatctt ttgagatcac ctcctgcgac ggaatatcca gcacctgctc catcatattg
      901 atcttgcggc caattctgtc cataaacggt acaacaaggc ttaatcccgg ctgcagagtt
      961 ttggtgtaac gtccaaagcg ctccaccgtc cactggtatc cctgcggaac gattttgacg
     1021 cccgcgccga cgatcaccag cgcgacgaaa atgagaatag ggataagaat gagcatagct
     1081 aaacctcctg ttgcgttgtc cataaaccga ttttgctgac gaattaagcg aattatacct
     1141 gattcagtaa agcatgttcc ccccttatta attacaggga tacactatcg ctataaaaat
     1201 atgaacaacg gatgcgcaat aaatgacaaa acgtagcatg ttgcttgagt taaagcaggt
     1261 cggttaccag actgcgacga caaaaatagt gaataacatc agttttacgc tgcaacgcgg
     1321 cgaatttaag ttaattaccg gtccttctgg ctgcggaaaa agtacgttgt tgaaaatggt
     1381 ggcctcgcta ataagccctg atatcggcgt gattcttttt gaggggcggg atattactac
     1441 tctgagtccg gaagcctatc gccagcaggt ttcttattgc gctcagacgc cagcgctatt
     1501 cggcgatacg gtttacgata acctgatttt tccctggcaa attcgccatc agcgcccgca
     1561 gccgacagcc ttcgcagacg atctggcgcg ttttgaactg ccggagacga ttctgcaaaa
     1621 accgattgcc gcgctttccg gcggggaaaa acagcgtatt gctctaattc gtaatctaca
     1681 gtttctgccg aaaatactgt tactcgacga aataaccagc gcgctggatg aacataacaa
     1741 acggaatgtg aatgatatta ttcatcgcta tgttcgcgat aagcaggtcg ctgtcttgtg
     1801 ggtaacgcat gataaagatg aaattcaaca cgcggataag gtgataacgt taacgccatc
     1861 tgccggagag atgcaggagg cgcgttatga acgagcataa tattaccaat acctcgctgg
     1921 cgttatcgat gctgctggtg gtggtcgcga tgctcatcag tcacaaggaa aagctggcgc
     1981 tggaaaaaga tattctgtgg agcgtatgcc gggcggtgat acagctcatt attgtcggct
     2041 atgtactgaa atacatcttt ggcgttaatc atgccgccct gacgctactg atggtgctgt
     2101 tcatctgttt taacgccgca tggaacgcgc aaaagcgcag taaatatatc gataaggcat
     2161 ttctctcctc gtttatcgcc atcaccgtcg gcgccggact aacgctgacg gtactggtgc
     2221 ttaccggttc gattgaattt gcgccgatgc aggtgattcc catcgctggc atggtcgccg
     2281 gcaatgcgat ggtggcggta gggctgtgct acaaccaact ggggctgcgt tttcatagcg
     2341 agcagcagca aatccaggaa aaattaagtt tgggcgcaac gccgaaaatg gcctccgccg
     2401 ggcttatccg cgatagcatc cgcgcatcgc ttatcccgac gatcgactcg gcaaagaccg
     2461 ttgggctggt gagcctgccg gggatgatgt ccgggctgat ttttgccggg atcgatccgg
     2521 taaaagcgat taaatatcaa attatggtaa cgtttatgct gttatcgaca gccagcctgt
     2581 ctaccatcat tgcctgctat ttaacctacc ggaagttcta taattcgcgt catcagttgg
     2641 tagtgatgcc gctcaagaaa tcatgatagt tgccggatga tggcgcaagc gccttatccg
     2701 gcctgaggac gacaggtagg ccagataagc gcgccatcag gcaagagagg attaatacag
     2761 tagcgcgtac aactggcggc ggtatttcga cgccagcgcg tcgccggtgc cgagcgcggc
     2821 aaggatctcc tggaaggttt tgcgcgtctg tccctcggcg gcggcaagat cttttctcag
     2881 atggctgaac agcaattcca gcgcttcttc attacgtccg acctggtgca actgcaacgc
     2941 cagttgcgtt gccaaagccg catcctgcgg attatccgcg acttgctgct gaagttgctg
     3001 aatttccggc gtatccgccg cctgtttaag cagttcgatc tgcgcgacca gcccctgata
     3061 acgggtatcc tgatcctgta gcgggatagt ttttaatacc gcttcggcct cttcagagcg
     3121 gttcagcgca atttgcgctt ccgccagtaa caggccaatc tcactgttct gcgaagagag
     3181 ctgccaggcg tctttgagta acggcagtgc gtcaacgtag ttgccctcct gcattaactg
     3241 catcgcttgt tgcgctttta gctcttcttc acgcggcagt actttatcca gcagagcgcg
     3301 gattgcctct tccggctgcg gcccctggaa accatcgacc ggttggccat tctggaacag
     3361 atagactgtc gggatggcgc gtagaccaaa ctgagcggcg atcatctgtt cggcgtcgca
     3421 gtccagcttt gccagaataa actgaccgtg gtactgggca gccagacttt ccagcactgg
     3481 cgttaattgc agacagtgtt ggctgcgttc agaccagaaa tagaacagta ccggcgtggt
     3541 catggactgc tctaaggtct gctgcaggtt ggattcatta atattgacaa tgttctgtac
     3601 ggacatggcg tcgctctctt ttgtctgtgt cacgtttaca tgggggctga cgggcgcgct
     3661 tcaactcagc tttgtaaaat tttatccagc atccggcccg gcaatatgcg tttcagcgcc
     3721 atcaccgccc aggtgaccag cgtaacggga tagcgcagcc tgggtttatc gcttgcaaaa
     3781 gcatgacgca ctttcgctac taccgcgtca ggatcgcggg tgaaacgcgc ggcgatgccg
     3841 ggattttcta ccggtttatc acgctgcgtc tggttaacgt tatcggtaaa acgggtacga
     3901 atcggccccg gttctatcag gctcacttta atgcctgtgt gccgtagctc catacgtagc
     3961 gcgtcagacc aggcttcgag cgcatatttg ctggcggcgt aagcgccgcg ccctggggtg
     4021 gaaatcagcc ccatcaccga tgaggtcatc acaatgcgtc cttcgccatg cggcaacatg
     4081 gcgggaagta agcgcatggt aagctgatgc gcgccgaaga aattactgga aaactgttgc
     4141 tccatctgtt cacggctgat ggtggaaagg gggccataca cgccgtagcc ggcattgtta
     4201 aagatcccat acagacgatt atcggtcagg gcgatcactt catcggcggc acgatccacg
     4261 ctttcagggg agtcgagatc gatcaacacg ccggtaaatc ccatactgtt catccgggcg
     4321 acatcatcag gtttgcggca gcccgccagg atttgaaagc cctggcgttt aagttcaagc
     4381 gcgctgtcca gaccgattcc gctggaacat cctgttatta agaccgattt ttgcataact
     4441 ttacctgtca ggatctccgt tgatttaaga gtcgtggtta actatatccg tcatacttca
     4501 agttgcctgt gcgttcgttt actccagtca cataggtatc tatgctcctg gaaattctct
     4561 tacgtgccgc cttcatgcaa ctcgaatgat tcaggagaga aaaggggtca actgcttcgc
     4621 catccagtcg gcaataaacg gctgcgcgtc gcggttggga tgaataccgt catcctgcat
     4681 ccactgtggt ttcagatata cctcttccat aaaaaacggt aatagaggaa tatcgaactc
     4741 tttggcgagc ttaggataaa tggcgctaaa ggattcatta taacggcgac cgtagttagc
     4801 gggcagatga atttgcatca gtaacggttg ggcatcggcg gctttcaccg tctgaatgat
     4861 tttacgtagc gtctgttcgg tttgcgcagg cgcaaaaccg cgtaggccat cgttgccgcc
     4921 aagctccacc actacccagc gcgggtgatg ctgttgcaac agcgccggca aacgcgccag
     4981 tccctgctgc gaggtatccc cgcttatact ggcattaacg accgacgttt tgttttgcca
     5041 tttatcatta aggagcgacg gccatgccgc gctggcggtc atacggtaac cggcgctgag
     5101 gctatcgccc agaattaata aggtgtctgc ggcggcggca cggaaagtta acaggatcaa
     5161 aaacaggaag ggcaaatgcc agcggaaaac agtgttgaag ttcatcgtct caggaagtcc
     5221 gtcggtcagg gtgagcatga gctttccatc cttaccggag ttgaactggt tgtcaaacgc
     5281 ggcgaaacca ttgcgctgat tggcgaatca ggatcgggaa aatctacgct gctggcgatt
     5341 ctcgccggac tggatgacgg cagtagcgga gaggtcagtc tggtcgggaa accgcttcat
     5401 cagatggacg aagaggcgcg ggcgcagctt cgcgctcagc atgtcggttt tgtttttcaa
     5461 tccttcatgc ttattcctac gcttaacgcg ctggaaaacg ttgagctacc ggccctgcta
     5521 cgcggtgaaa acagcggtca gagtaaggcg ggggcgaaag cgctgctcga acaactggga
     5581 ctgggaaaac ggcttgacca ccttccggca cagctttccg gcggcgaaca gcagcgcgta
     5641 gcgctggcgc gcgcgtttaa cgggcgtcct gatgtgctgt ttgccgatga gccgacgggc
     5701 aaccttgacc gtcagaccgg agataaaatc gccgacctgc tattttcgct taaccgcgag
     5761 cacggcacta cgctgattct ggtgacgcac gacccggcgc tggcggcgcg ctgcgaccgg
     5821 cggctacggt tggtcaacgg tcagttacag gaggaggcat gatagcccgc tggttctggc
     5881 gcgaatggcg ctcgccgtcg ctgattattg tctggctggc gttgagtctg gcggtggcct
     5941 gcgtactggc gctcggcagt atcagcgacc ggatggaaaa agggttaagt cagcaaagcc
     6001 gcgagtttat ggcaggcgat cggacgctgc aaagttcgcg ggaggtaccg aaagcctggc
     6061 ttgaagaggc gcgtaaacgc ggccttaacg tgggcgagca gttaaccttt gcgaccatga
     6121 cgtttgccgg cgatacgccg caactggcca gcgtgaaggc ggtagatagc gtttatccga
     6181 tgtacggcga attgcaaacc cgtccaggcg gagtgaaacc gcagccgggt agcgtactgc
     6241 tggcgccgcg tctgatggcg ctgcttaatt tgaaaacggg cgataccatt gatgtcggcg
     6301 acgtgacctt gcgtattgct ggtgaagtgg tgcaggagcc ggattccgga tttaaccctt
     6361 ttcagatggc gccgcgtctg atgatgaata tggccgatgt ggcaaaaacc ggtgcgatac
     6421 agccggggag tcgcgtgatg tggcggtata aattcggcgg aacgccgcaa cagcttgctg
     6481 gctatgaaag ctggctgtta ccgcagctta aaccggaaca tcgctggtac ggactggagc
     6541 aggatgacgg ggcattgggg aaatcgctcg aacgttcgca gcagtttttg ctgctttcgg
     6601 cgttattaac gctactgctg gcggtagctg ccgtcgcggt ggcgatgagc cattactgcc
     6661 gtagccgcta cgatctggtg gcgattttaa aaacgttggg cgcgggccgg gcccagttgc
     6721 gtaaacttat catcggacag tggttgatgg tgctggggct ttccgccgtc acgggaggcg
     6781 cgattgggtt actgtttgaa aacatattgc tggtgctgct aaaaccggta ttgcccgccg
     6841 atttgccgcc cgccagcctg tggccctggc tgtgggcgct g
//
LOCUS       DAGWFR010000194         6779 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.197, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000194 DAGWFR010000000
VERSION     DAGWFR010000194.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 6779)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6779)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6779
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.197"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..78)
                     /locus_tag="MOX77_004005"
     CDS             complement(<1..78)
                     /locus_tag="MOX77_004005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlgF"
                     /protein_id="HCA3359403.1"
                     /translation="MDHAIYTAMGAASQTLNQQAVTASNL"
     gene            complement(99..1310)
                     /gene="flgE"
                     /locus_tag="MOX77_004006"
     CDS             complement(99..1310)
                     /gene="flgE"
                     /locus_tag="MOX77_004006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook protein FlgE"
                     /protein_id="HCA3359404.1"
                     /translation="MSFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA
                     GSKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKL
                     DENRNLVNMQGMQLTGYPATGTPPTIQQGANPAPITIPNTLMAAKSTTTASMQINLNS
                     TDPVPSKTPFSVSDADSYNKKGTVTVYDSQGNAHDMNVYFVKTKDNEWAVYTHDSSDP
                     AATAPTTASTTLKFNENGILESGGTVNITTGTINGATAATFSLSFLNSMQQNTGANNI
                     VATNQNGYKPGDLVSYQINNDGTVVGNYSNEQEQVLGQIVLANFANNEGLASQGDNVW
                     AATQASGVALLGTAGSGNFGKLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQ
                     DQILNTLVNLR"
     gene            complement(1337..2035)
                     /gene="flgD"
                     /locus_tag="MOX77_004007"
     CDS             complement(1337..2035)
                     /gene="flgD"
                     /locus_tag="MOX77_004007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook assembly protein FlgD"
                     /protein_id="HCA3359405.1"
                     /translation="MSIAVNMNDPTNTGVKTTTGSGSMTGSNAADLQSSFLTLLVAQL
                     KNQDPTNPLQNNELTTQLAQISTVSGIEKLNTTLGAISGQIDNSQSLQATTLIGHGVM
                     VPGTTILAGKGAEEGAVTSTTPFGVELQQPADKVTATITDKDGRVVRTLEIGELRAGV
                     HTFTWDGKQTDGTTVPNGSYNIAITASNGGTQLVAQPLQFALVQGVTKGSNGNLLDLG
                     TYGTTTLDEVRQII"
     gene            complement(2047..2451)
                     /gene="flgC"
                     /locus_tag="MOX77_004008"
     CDS             complement(2047..2451)
                     /gene="flgC"
                     /locus_tag="MOX77_004008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001740734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgC"
                     /protein_id="HCA3359406.1"
                     /translation="MALLNIFDIAGSALAAQSKRLNVAASNLANADSVTGPDGQPYRA
                     KQVVFQVDAAPGQATGGVKVASVIESQAPEKLVYEPGNPLADANGYVKMPNVDVVGEM
                     VNTMSASRSYQANIEVLNTVKSMMLKTLTLGQ"
     gene            complement(2455..2871)
                     /gene="flgB"
                     /locus_tag="MOX77_004009"
     CDS             complement(2455..2871)
                     /gene="flgB"
                     /locus_tag="MOX77_004009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgB"
                     /protein_id="HCA3359407.1"
                     /translation="MLDRLDAALRFQQEALNLRAQRQEILAANIANADTPGYQARDID
                     FASELKKVMVRGREETGGVALSLTSSRHIPAQAVSSPAVDLLYRVPDQPSLDGNTVDM
                     DRERTQFADNSLKYQMGLTVLGSQLKGMMNVLQGGN"
     gene            3028..3687
                     /gene="flgA"
                     /locus_tag="MOX77_004010"
     CDS             3028..3687
                     /gene="flgA"
                     /locus_tag="MOX77_004010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring formation protein
                     FlgA"
                     /protein_id="HCA3359408.1"
                     /translation="MQTLKRGFAVAALLFSPLTMAQDINAQLTTWFSQRLAGFSDEVV
                     VTLRSPPNLLPSCEQPAFSMTGSAKLWGNVNVVARCANEKRYLQVNVQATGNYVAVAA
                     PVARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLAPGQPVQLTMIRQAW
                     RVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVRMTSGQIVSGTVDSDGNILIN
                     L"
     gene            3779..4072
                     /gene="flgM"
                     /locus_tag="MOX77_004011"
     CDS             3779..4072
                     /gene="flgM"
                     /locus_tag="MOX77_004011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma-28 factor FlgM"
                     /protein_id="HCA3359409.1"
                     /translation="MSIDRTSPLKPVSTVQTRETSDTPVQKTRQEKTSAATSASVTLS
                     DAQAKLMQPGVSDINMERVEALKTAIRNGELKMDTGKIADSLIREAQSYLQNK"
     gene            4077..4499
                     /gene="flgN"
                     /locus_tag="MOX77_004012"
     CDS             4077..4499
                     /gene="flgN"
                     /locus_tag="MOX77_004012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis chaperone FlgN"
                     /protein_id="HCA3359410.1"
                     /translation="MTRLSEILDQMTTVLNDLKTVMDAEQQQLSVGQINGSQLQRITE
                     EKSSLLATLDYLEQQRRLEQNAQRSANDDIAERWQAITEKTQHLRDLNQHNGWLLEGQ
                     IERNQQALEVLKPHQEPTLYGADGQTSVSHRGGKKISI"
     gene            complement(4581..6116)
                     /gene="murJ"
                     /locus_tag="MOX77_004013"
     CDS             complement(4581..6116)
                     /gene="murJ"
                     /locus_tag="MOX77_004013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HCA3359411.1"
                     /translation="MNLLKSLAAVSSMTMFSRVLGFARDAIVARIFGAGMATDAFFVA
                     FKLPNLLRRIFAEGAFSQAFVPILAEYKSKQGEEATRIFVAYVSGLLTLALAVVTVAG
                     MLAAPWVIMVTAPGFADTADKFALTTQLLRITFPYILLISLASLVGAILNTWNRFSIP
                     AFAPTFLNISMIGFALFAAPYFNPPVLALAWAVTVGGVLQLVYQLPYLKKIGMLVLPR
                     INFHDTGAMRVVKQMGPAILGVSVSQISLIINTIFASFLASGSVSWLYYADRLMEFPS
                     GVLGVALGTILLPSLSKSFASGNHDEYCRLMDWGLRLCFLLALPSAVALGILAKPLTV
                     SLFQYGKFTAFDAAMTQRALIAYSVGLIGLIVVKVLAPGFYSRQDIKTPVKIAIVTLI
                     MTQLMNLAFIGPLKHAGLSLSIGLAACLNASLLYWQLRKQNIFTPQPGWMWFLMRLII
                     SVLVMAAVLFGVLHIMPEWSQGSMLWRLLRLMAVVIAGIAAYFAALAVLGFKVKEFVR
                     RTA"
     gene            complement(6420..>6779)
                     /locus_tag="MOX77_004014"
     CDS             complement(6420..>6779)
                     /locus_tag="MOX77_004014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HCA3359412.1"
                     /translation="TSESGEMCYAEHHFSADKLQITTSMHRRAGSQRESVQAVTDGGL
                     YDVTDMREWREERGQGILIKPIPGWQTTLEQRGFVGCARHFIDCVQNQTVPETAGEQA
                     ILAQRVVEALWRDAISE"
BASE COUNT         1595 a         1912 c         1785 g         1487 t
ORIGIN      
        1 caggttgctg gccgttaccg cctgctggtt aagcgtctgg ctggccgccc ccatggcggt
       61 ataaattgcg tgatccatta agctatcccg tcaggcgctt agcgcaggtt aaccagcgta
      121 ttgaggatct ggtcctgggt tttgatggtc tgcgcattcg actggtagtt acgctgcgcg
      181 acgatcatat tcaccagctc tttactcaaa tccacgttag aggcttccag cgcgccgttc
      241 gtcagcttac cgaagttgcc ggaaccggca gtccccagca gcgctacccc ggaggcctgc
      301 gtcgccgccc agacgttatc gccctgggat gccagacctt cgttgttggc gaagttagcc
      361 agcacaatct gccccagcac ctgctcctgc tcgttggagt agttgccaac cacggtgcca
      421 tcattgttaa tctggtagct caccaggtcg ccaggcttat agccgttttg attggtggcg
      481 acgatgttat tagccccggt gttctgctgc atggagttaa ggaagctgag ggagaaggtg
      541 gccgctgtcg cgccattaat cgtaccggtg gtgatgttca ccgtaccgcc agactccaga
      601 atcccgtttt cattgaattt cagcgtagtg gacgccgttg ttggcgcagt ggctgcagga
      661 tcgctgctgt catgggtgta cacagcccat tcattatctt tggttttcac aaaatagacg
      721 ttcatgtcat gggcattacc ctggctgtca taaacggtga cggtgccttt tttgttatac
      781 gaatccgcat cactcacgct aaagggcgtt ttagacggta cagggtccgt tgagttcagg
      841 ttgatctgca ttgacgcggt ggtggtcgat ttcgccgcca tcagcgtgtt cggaatggtg
      901 atcggcgcag gattcgcccc ctgctgaatg gtcggcggcg taccggtggc cggatagccg
      961 gtcaactgca tcccctgcat attgaccagg ttacggttct cgtccagttt gaactggccg
     1021 ttgcggctat agaacacgga accgttgctg tctaccaggc ggaaaaaacc gttctggcta
     1081 atcgcgacat ccagcccgcg cccggtgttc gttgtcgtac cgtcggtaaa atcctgggta
     1141 atccccgcca cttttacgcc caaccccact ttggaaccgg cgaacatatc ggcaaatgat
     1201 gccgtaccgg acttaaagcc ataggtggcg gagttggcga tgttattacc gataacatca
     1261 aggttggtgg ccgcagcgtt caggccgcta accgcttgag aaaaagacat gactgactcc
     1321 tgataagtgt aagggcttag attatttgcc gaacttcgtc gagtgtggtg gtgccgtagg
     1381 tacccagatc caacaggttg ccgttactgc ccttcgtcac gccctgtacc agagcgaatt
     1441 gcagcggctg cgccaccagt tgcgtcccgc cattgctggc ggtaatcgca atgttgtaag
     1501 aaccattcgg taccgttgtt ccgtccgttt gcttaccatc ccaggtaaag gtgtgtaccc
     1561 cggctcgcaa ctcaccgatc tccagcgtcc gtaccacccg gccatcttta tcggtaatgg
     1621 ttgccgtcac tttgtccgca ggctgttgca attccacgcc aaacggcgtc gtggacgtca
     1681 cggccccttc ttccgcgcct ttacccgcca gaattgtggt gccaggcacc ataacgccat
     1741 gtccaatcag cgtggtcgcc tgtagggact gactattatc gatttgcccg gaaatagccc
     1801 ccagcgtcgt attcagtttt tcaatgccgc tcacggtact gatttgcgcc aactgtgtcg
     1861 ttaactcatt attttgtaat gggttagtcg ggtcctggtt cttcaattgc gcgaccagta
     1921 aggtcaggaa actgctttgc agatcggcag cgttgcttcc ggtcatcgac ccgctgccgg
     1981 tcgtcgtttt gacgcccgtg ttggtcgggt cattcatatt tacggcaata gacatacgcg
     2041 cctcctttac tggcctaatg tcagcgtttt aagcatcatg ctttttacgg tattcaggac
     2101 ttcgatattt gcctgatagc tgcgcgaggc tgacatcgtg ttgaccattt cgccgaccac
     2161 atcgacgttg ggcattttga cgtaaccatt agcgtccgcc agcggattgc ctggctcata
     2221 aaccagcttt tccggtgcct gactttcaat cacgctggcg acctttaccc cgccagtggc
     2281 ttgacccggc gcggcgtcca cctgaaaaac cacctgtttg gcgcgataag gctgtccgtc
     2341 cgggccggtg acgctatccg cattcgcaag gttactggcc gcaacgttca accgcttgga
     2401 ctgtgcggca agcgccgatc cggcaatatc aaaaatgttt aacagcgcca cgaattagtt
     2461 tcctccctgt agcacattca tcatgccttt gagttggcta cccagaacgg taagccccat
     2521 ctgatatttg agactgttat ccgcaaactg cgtacgttcc ctgtccatat ctacggtgtt
     2581 accatccaaa gaaggctgat cgggtacgcg gtaaagcaga tccactgcgg gagaagagac
     2641 cgcctgggcg ggaatatggc gagaagaagt caacgacaac gcgacgccgc cggtttcttc
     2701 ccgtccgcgc accatcactt tttttaactc actggcaaaa tcaatatcgc gcgcctgata
     2761 ccccggcgta tcggcattgg cgatattcgc cgctaatatt tcctgacgtt gcgcgcgcag
     2821 atttagcgct tcctgctgaa atcgtaaggc ggcatcgagc ctgtcgagca tatctcctcc
     2881 gcaaatggca aaattcagcc gacagcttaa atgccttcac gcgcgcgtta tcgccggaat
     2941 aaacgcaaaa tgcgtcgcta tttattgcgt tgatgcttgc ttcacacggg tagaatcctg
     3001 tcatgacatc aaccaggggg aagtaccatg caaacgttaa aacgaggatt cgccgtggcg
     3061 gctttgctgt tcagccccct gacaatggcg caggacatca acgcccagct gaccacgtgg
     3121 ttttcccagc gtctggctgg cttcagcgac gaggtggttg tcacgctccg ttcaccgccc
     3181 aatctgctac cgagctgcga gcagccagcc ttcagcatga cgggcagcgc gaagctgtgg
     3241 ggcaacgtca atgtggtggc gcgctgcgcc aatgaaaaac gttatttgca ggtgaatgtg
     3301 caagcgaccg gcaattatgt cgccgtagcc gcgcccgtcg cgcgcggcgg aaaattgacg
     3361 ccggccaacg tcacgctaaa acgtggcaga ctggatcagt taccgccgcg gacggtactg
     3421 gatatccgtc agattcagga tgccgtcagt ttgcgcgatc tcgctcccgg gcagccggta
     3481 cagcttacga tgatacgtca ggcctggcgt gtcaaagcgg gtcaacgagt acaggtcatc
     3541 gccaatggcg aggggtttag cgtcaatgcg gaaggtcagg cgatgaataa tgccgccgtc
     3601 gcgcaaaatg cgcgcgtgcg catgacatcg ggtcaaatcg tgagtggaac cgtcgattct
     3661 gatgggaata ttcttattaa cctataattg tgtaaagatt ttgtcgcggc tgccgatgag
     3721 atattcaacc atgatggtag ctggccgcta caacgtaacc ctcgatgagg ataaataaat
     3781 gagcattgac cgtacctcac ctttgaaacc cgttagcact gtccagacgc gcgaaaccag
     3841 cgacacgccg gtacaaaaaa cgcgtcagga aaaaacgtcc gccgcgacga gcgccagcgt
     3901 aacgttaagc gacgcgcaag cgaagcttat gcagccaggc gtcagcgaca ttaatatgga
     3961 acgcgtcgaa gcattaaaaa cggctatccg taacggtgag ttaaaaatgg atacgggaaa
     4021 aatagcagac tcgctcattc gcgaggcgca gagctactta cagaataaat aagcgtatga
     4081 ctcgtttgtc agaaatactt gaccagatga ccaccgtcct gaatgacctg aagacggtga
     4141 tggacgccga gcaacaacag ctttccgtag gccagattaa cggcagccag ctacagcgta
     4201 ttacagaaga aaaaagctcg ttgctggcga cgctggatta tctggaacaa cagcgccgtc
     4261 tggagcagaa cgcgcagcgt agcgcaaacg atgacattgc agagcgctgg caggcgatta
     4321 ccgaaaaaac gcagcatctg cgcgacctca accagcacaa cggctggctg ctggaagggc
     4381 aaatcgagcg taatcaacag gcgctggagg tgctgaaacc tcaccaggag ccgaccttgt
     4441 acggggctga cggtcagact tccgtctctc accgcggcgg taaaaaaata tctatctaat
     4501 cattgccgga tggcgacgtt gcgcctttcc ggcctgaatg ccttgtaggc ctgatagcac
     4561 agcgctatca ggcactgaat ttacgccgtc cggcgaacaa actctttcac tttaaagccc
     4621 agcacggcaa gcgcggcgaa ataggccgcg atacccgcga tcactaccgc catcaaacgc
     4681 agcaaacgcc atagcatcga cccttgcgac cactccggca taatatgcaa cacgccgaac
     4741 aacacggcgg ccattaccag tacggaaatg atcagacgca tcaggaacca catccacccc
     4801 ggttgtggcg taaagatatt ctgtttgcgc agttgccagt acagcagcga cgcattgaga
     4861 catgccgcca gaccaataga gagcgacagc ccggcgtgtt tcagcggtcc aataaacgcc
     4921 aggttcatta actgcgtcat gattaacgtc acgatggcga ttttcaccgg cgttttaata
     4981 tcctggcgag aatagaagcc cggggccagc acttttacga cgatcaagcc aatcagcccc
     5041 accgaatagg cgattaacgc ccgctgcgtc atcgccgcat caaaggcggt gaatttaccg
     5101 tactgaaaca gcgagaccgt cagcggcttc gccagaatgc ctagcgctac cgcgctcggc
     5161 aacgccagta aaaagcacaa acgcagcccc cagtccatca ggcggcagta ctcatcatga
     5221 ttgccgctgg caaagctttt cgacaatgac ggcaacagga tggtccccaa cgccacgccc
     5281 agcacgccgg acgggaactc catcaaccga tcggcatagt acaaccatga gaccgagccg
     5341 gaggccagaa acgaggcgaa aatggtattg atgataaggg agatctgact gacggaaacg
     5401 cccaaaatcg ccggccccat ctgtttgacc acccgcatcg ccccggtgtc gtgaaagtta
     5461 atgcgcggca gcaccagcat accgatcttt ttcaaatacg gaagttgata caccagttgc
     5521 agcacgccgc cgacggtgac tgcccaggct aacgccagca ccggcggatt aaagtatggc
     5581 gcggcgaata atgcaaaacc gatcatactg atattaagaa atgtcggcgc aaaagcggga
     5641 atagagaagc gattccaggt gttgagaatg gcgccaacca gtgaagccag cgagatcagc
     5701 agaatatagg gaaacgtaat ccgcagcagt tgcgtcgtca gcgcaaattt atccgcagta
     5761 tcggcaaaac ccggcgcggt taccataatc acccacgggg cggccagcat accggccacc
     5821 gtcacgacgg ccaatgccag cgtcaacagg ccggaaacgt aagcgacaaa gatccgcgtc
     5881 gcttcttcac cctgcttgct cttatattcc gccaggatag gcacaaaggc ctgagaaaaa
     5941 gcgccttcgg caaagatccg gcgtagtaga ttgggaagtt taaacgccac aaaaaaggcg
     6001 tcggtcgcca tccctgcgcc aaaaattctg gcgacaatcg catcacgggc aaagcccaac
     6061 acgcgtgaaa acatagtcat cgagctgacg gcagccagcg atttcaataa attcatttct
     6121 tttgtattcc agaccctggc gtaaaactcc tgcatggctg atccatcgac cggataacgc
     6181 aacttctgcc gtatccggct gtatcactgc gcctgacggc gacgtcaaaa cgtcttatca
     6241 ggccttacag actccccacg gtttgccatt attcactgtg aaaagaggta ttatgtagag
     6301 tgggcatata tacccgccat acttcgagct gcatgtgcgt tagcttttct gcaactcgaa
     6361 ttattgaggg tatagtacct ggattacgat gaattactac cgccagatgt tacagaggat
     6421 tattcgctga tggcgtcccg ccacagcgcc tccacgacgc gctgggccaa aatcgcctgc
     6481 tcccccgccg tttccggaac cgtctgattt tgtacgcagt caatgaaatg ccgcgcgcat
     6541 ccgacaaaac cacgctgctc aagcgttgtt tgccaacccg gaatgggttt gatgagaata
     6601 ccctgcccgc gctcttcgcg ccattcacgc atatccgtca cgtcatacag cccgccatcg
     6661 gtgacggcct ggaccgattc acgctgactt ccggcgcgcc ggtgcatact ggtggtaatt
     6721 tgtaatttgt cggcggaaaa atgatgttcc gcatagcaca tttcgccgga ctcgctggt
//
LOCUS       DAGWFR010000195         6774 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.198, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000195 DAGWFR010000000
VERSION     DAGWFR010000195.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 6774)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6774)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6774
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.198"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..1236)
                     /gene="glpK"
                     /locus_tag="MOX77_004015"
     CDS             complement(<1..1236)
                     /gene="glpK"
                     /locus_tag="MOX77_004015"
                     /EC_number="2.7.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol kinase GlpK"
                     /protein_id="HCA3359413.1"
                     /translation="MTEKYIVALDQGTTSSRAVVMDHDANIVSVSQREFEQIYPKPGW
                     VEHDPMEIWASQSSTLVEVLAKADISSDQIAAIGITNQRETAIVWERETGKPIYNAIV
                     WQCRRTANICEQLKRDGLEDYIRDNTGLVVDPYFSGTKVKWILDHVEGSRERAKRGEL
                     LFGTVDTWLIWKMTQGRVHVTDYTNASRTMLFNIHDLDWDDKMLDVLDIPRAMLPQVR
                     KSSEVYGQTNIGGKGGTRIPIAGIAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNTG
                     EKAVKSENGLLTTIACGPSGEVNYALEGAVFMAGASIQWLRDEMKLISDAFDSEYFAT
                     KVKDTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNSNHIIRATLESIAYQTRDVL
                     EAMQADSGIRLHALRVDGGA"
     gene            complement(1257..2102)
                     /locus_tag="MOX77_004016"
     CDS             complement(1257..2102)
                     /locus_tag="MOX77_004016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin"
                     /protein_id="HCA3359414.1"
                     /translation="MSQTSTLKGQCIAEFLGTGLLIFFGVGCVAALKVAGATFGQWEI
                     SVIWGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKVVPFIISQVAGAFCAAA
                     LVYGLYYNLFVDFEQTHHIVRGSVESLDLAGIFSTYPNPHINFVQAFAVEMVITAILM
                     GLILALTDDGNGVPRGPLAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKMFAGLAG
                     WGEIAFTGGRDIPYFLVPLFGPIVGAILGAFAYRKFIGRHLPCDICVVEEKDSTAATQ
                     QNASL"
     gene            2501..2740
                     /gene="zapB"
                     /locus_tag="MOX77_004017"
     CDS             2501..2740
                     /gene="zapB"
                     /locus_tag="MOX77_004017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring assembly protein ZapB"
                     /protein_id="HCA3359415.1"
                     /translation="MSLEVFEKLEAKVQQAIDTITLLQMEIEELKEKNNSLTQEVQSA
                     QHQREELERENNFLKEQQSGWQERLQALLGRMEEV"
     gene            complement(2962..3447)
                     /gene="rraA"
                     /locus_tag="MOX77_004018"
     CDS             complement(2962..3447)
                     /gene="rraA"
                     /locus_tag="MOX77_004018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001392924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E activity regulator RraA"
                     /protein_id="HCA3359416.1"
                     /translation="MKYDTSELCDIYQEDVNVVEPLFSNFGGRSSFGGQIITVKCFED
                     NGLLYDLLEQNGRGRVLLVDGGGSVRRALVDAELARLATQNEWEGLVIYGAVRQVDDL
                     EELDIGIQAIAAIPVGAAGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI
                     E"
     gene            complement(3540..4469)
                     /gene="menA"
                     /locus_tag="MOX77_004019"
     CDS             complement(3540..4469)
                     /gene="menA"
                     /locus_tag="MOX77_004019"
                     /EC_number="2.5.1.74"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoate
                     polyprenyltransferase"
                     /protein_id="HCA3359417.1"
                     /translation="MTEQQQISRTQAWLESLRPKTLPLAFAAIIVGTALAWWQGYFDP
                     LVALLALITAGLLQILSNLANDYGDAVKGSDKPDRIGPLRGMQKGVITQQEMKRALII
                     TVVLICISGLALVAVACHTLTDFVGFLILGGLSIIAAITYTVGNRPYGYIGLGDISVL
                     VFFGWLSVMGSWYLQAHTLIPALILPATACGLLATAVLNINNLRDINSDRENGKNTLV
                     VRLGDVNARRYHACLLLGALLCLALFNLLSLHSPWGWLFILAAPLLIKQARYVMRERE
                     PAAMRPMLERTVKGALLTNLLFVIGILLSQWAV"
     gene            complement(4536..5867)
                     /gene="hslU"
                     /locus_tag="MOX77_004020"
     CDS             complement(4536..5867)
                     /gene="hslU"
                     /locus_tag="MOX77_004020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019841241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HslU--HslV peptidase ATPase subunit"
                     /protein_id="HCA3359418.1"
                     /translation="MSEMTPREIVSELNKHIIGQDNAKRSVAIALRNRWRRMQLDEEL
                     RHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRD
                     LTDAAVKMVRVQAIEKNRYRAEELAEERILDVLIPPAKNNWGQAEQQQEPSAARQTFR
                     KKLREGQLDDKEIEINLAAAPMGVEIMAPPGMEEMTSQLQSIFQNLGGQKQKPRKLKI
                     KDAMKLLVEEEAAKLVNPEELKQDAIDAVEQHGIVFIDEIDKICKRGETSGPDVSREG
                     VQRDLLPLVEGCTVSTKHGMVKTDHILFIASGAFQVAKPSDLIPELQGRLPIRVELQA
                     LTTSDFERILTEPNASVTVQYKALMATEGVNIEFTDSGIKRIAEAAWQVNETTENIGA
                     RRLHTVLERLMEEISYNASDLHGQNITIDAEYVSKHLDALVADEDLSRFIL"
     gene            complement(5877..6407)
                     /gene="hslV"
                     /locus_tag="MOX77_004021"
     CDS             complement(5877..6407)
                     /gene="hslV"
                     /locus_tag="MOX77_004021"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HCA3359419.1"
                     /translation="MTTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVI
                     AGFAGGTADAFTLFELFERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADET
                     ASLIITGNGDVVQPENDLIAIGSGGPYAQAAARALLENTELGAREIAEKALDIAGDIC
                     IYTNHFHTIEELTAKA"
     gene            complement(6499..>6774)
                     /gene="ftsN"
                     /locus_tag="MOX77_004022"
     CDS             complement(6499..>6774)
                     /gene="ftsN"
                     /locus_tag="MOX77_004022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsN"
                     /protein_id="HCA3359420.1"
                     /translation="ITRAPEAPKATAEKKDERRWMVQCGSFKGAEQAESVRAQLAFEG
                     FDSKITTNNGWNRVVIGPVKGKENADSTINRLKMAGHTNCIRLATGG"
BASE COUNT         1603 a         1806 c         1771 g         1594 t
ORIGIN      
        1 tgcgccgccg tccacacgca gagcgtgcag gcggataccg gagtcggcct gcatcgcttc
       61 cagtacgtcg cgggtctggt aagcgatgga ttcgagcgtc gcgcggataa tgtgattaga
      121 gttcacgccg cgggtcaggc caaaaatggc gccgcgggca tacggatccc agtacggcgc
      181 gcccagaccg gtgaaggccg gaaccacgta gacaccgttg gtatctttca ctttcgtggc
      241 gaaatattcg gagtcgaatg cgtcgctgat gagcttcatt tcatcacgca gccattgaat
      301 ggacgctccc gccataaaca ccgcaccttc cagcgcatag ttgacttcgc cgcttgggcc
      361 gcaggcgatg gtggtcagca ggccgttttc cgattttacc gctttctcgc cggtgttcat
      421 cagcataaag cagccggtgc cgtaggtgtt ctttgccatt ccttccttta cgcacagttg
      481 gccgaagagc gcggcctgct gatccccggc aatcccggcg ataggaatac gtgtaccgcc
      541 tttaccgcca atattggtct ggccgtagac ttcggaggat ttacgtacct ggggcagcat
      601 cgcgcgtggg atatccagca cgtccagcat tttatcgtcc cagtccaaat catggatgtt
      661 gaacagcatg gttcgtgagg cgttggtgta atccgtaacg tggacgcggc cctgcgtcat
      721 cttccagata agccaggtat ccaccgtacc gaacagcagc tcgccacgct tcgcgcgttc
      781 gcgcgaacct tccacatggt caaggatcca tttcacttta gtgccagaga agtacgggtc
      841 gacgaccaga ccggtattgt cgcggatgta atcttccagg ccgtcgcgtt taagctgttc
      901 gcaaatattg gcggtacgac ggcactgcca gacaatagcg ttgtatatcg gtttgccggt
      961 ttcacgttcc cagacgatcg cggtttcacg ttggttggtg ataccgatag cggcaatctg
     1021 atcggaactg atatcggcct tagccagcac ttctaccagc gttgagcttt gagacgccca
     1081 aatttccatc gggtcgtgtt ctacccagcc tggcttagga taaatttgct caaattcacg
     1141 ctgtgatacg ctgacgatat tcgcgtcatg atccataacg accgcgcggg agctggtggt
     1201 accctggtcg agcgcaacga tatatttttc agtcataatt ttgtcccgta atcagattac
     1261 agcgaagcat tttgttgtgt ggccgcggtg gagtccttct cttccacgac gcagatatcg
     1321 cacggcaaat gacggccaat aaatttgcga taagcaaacg cgcccagaat ggcgccgacg
     1381 atggggccaa acagtggcac caggaagtaa ggaatgtctc taccgccggt aaacgcaatt
     1441 tcaccccagc cggcaagccc ggcgaacatt ttggggccaa agtcacgcgc cggattcatc
     1501 gcaaacccgg tcaacggccc catagaggca ccgataacgg cgatcagtaa accaatgagc
     1561 agtggcgcaa gcggaccgcg aggtacgccg ttaccgtcgt cggtcagcgc cagaatcagc
     1621 cccatcagaa tagcggtaat caccatttca accgcgaagg cctgcacaaa attgatatga
     1681 ggattcgggt aagttgagaa aatgcctgcg agatcgagac tttcaacgct gccacggacg
     1741 atatggtggg tttgttcgaa gtccacaaaa agattgtaat aaagcccgta aactaacgcc
     1801 gctgcgcaaa aggcgccggc aacttgagaa ataataaaag gaacaacttt acgtttgtcg
     1861 aaacaggcaa atagccagag tgcgatggtc actgccgggt tcaggtgtgc gccagaaaca
     1921 cctgccgtca ggtagatagc catcgctact cccagacccc agatgacgct gatttcccac
     1981 tgtccaaaag tagctccggc aactttaagc gcagcgacac aacccacccc gaaaaaaatc
     2041 aacaacccgg taccgaggaa ttcagcaatg cactggcctt ttaaggttga tgtttgactc
     2101 ataatcggat cctgaagagt atgtaatgat tattggtatg cgaggaggtc atggacatcc
     2161 acgatgccct gtaggcacac tgttaattta tcgctaacga gcaaaaacga gaaatatcga
     2221 aatcaaaatg tgtgtactgc gtcaataaaa tgagcgttat cgcgccatga ggcgcatttt
     2281 gagacagcag aagagagtga attgaatcat ttcattaacc aatatgttaa cacttttaag
     2341 ttattgaatg aatgttacca ggagatggat gaaaattgct gcaaaccgcg atctacgcgg
     2401 tatgtcgctg gacagcgaga gcggggcttc atacaatcga tactatatat tgtgcgcgtt
     2461 tacgtgaagc gtcgccttgc aattcaggag aggtaagatc atgtctttag aagtgtttga
     2521 gaaactggaa gcaaaagtac agcaggcgat tgacaccatc accctgttac agatggaaat
     2581 tgaagagctg aaagaaaaga acaacagcct gacgcaggaa gtgcagtctg cacagcatca
     2641 gcgtgaagaa ctcgagcgtg aaaataattt tctgaaggaa cagcagagcg gctggcagga
     2701 acgtttacag gcgctgcttg gtcgtatgga agaagtctaa tcctcgtcat atttcacgtt
     2761 atggcggcgt tggctgcgtg cgttcacccc agtcacatag tggcctatgc tcctggggat
     2821 tcactttctt gccgccttgc cctgacgcga aatctataga ggatttagaa tgcggatacc
     2881 ggtgggccgg ataaggcgta agccgacatc cggcaatcag cgacaacgca taaaaaaggc
     2941 gccttacggc gccttttttg atcactcgat atcaagcggg tcttcggaaa ggataatccc
     3001 ggtgttgtcg gcatagagat gatcgccgga gaagaacgtc acgccgccga aattgacgcg
     3061 cacatcgctt tccccaatgc cttcacctgc ggcgccaacc ggaatggcgg cgatcgcctg
     3121 aatgccgata tccagctctt ccagatcgtc cacctgacgc accgcgccat agataaccag
     3181 cccttcccat tcattttgcg tggccagacg cgccagctcc gcatcaacta atgcacgacg
     3241 gacagaaccg ccgccatcga ccagcagaac ccgaccacgg ccattttgtt cgagcagatc
     3301 gtacagcaac ccgttgtcct cgaaacattt taccgtgatg atttgtccgc caaacgacga
     3361 ccgccctcca aaattagaga acagcggttc cacgacgttg acatcttcct gatagatgtc
     3421 acaaagctcg gaagtatcgt atttcatagg cttaacgttc agttgctgcg agaattttta
     3481 gtatatcgcg ctaagtatac tgttggcaaa atcatcaatt gttaattgat atttgtcagt
     3541 taaacggccc actgacttaa gagtatccca atcacaaata acaggttggt taacaacgcg
     3601 cctttaacgg tacgttcaag catcgggcgc attgccgcag gctccctttc gcgcattacg
     3661 tagcgcgctt gtttaatgag caagggcgcg gccagaataa acaaccatcc ccacggactg
     3721 tgtagcgaga gcagattaaa cagcgccaga cagagcagcg cgcctagcaa caggcaggcg
     3781 tgataacgac gcgcgttgac atcgccaagt cgtaccacaa gggtgttttt gccgttctct
     3841 ctgtcgctat taatatcgcg caggttatta atattcagca ccgccgtcgc cagtaaaccg
     3901 caggcggtgg ccgggagaat cagcgccgga atcagcgtat gcgcctggag ataccagctc
     3961 cccatgacac ttagccagcc aaagaatacc aggacagaga tatcacccag cccgatataa
     4021 ccgtagggcc gattacccac ggtgtaggtg atggcggcga taatcgacag cccgcccaaa
     4081 atcaggaagc cgacaaaatc ggttaacgta tggcacgcga ccgccaccag cgccagtccg
     4141 gagatacaga tcagcacgac ggtaatgatt aacgcccgct tcatctcctg ctgggtgatg
     4201 acgccttttt gcatcccccg cagcggtccg atgcgatccg gtttatcact gcctttgaca
     4261 gcgtcgccgt aatcgttggc gaggttggat aaaatttgca acagcccggc ggtgataagg
     4321 gccagcagtg cgaccagagg atcgaaatag ccttgccacc atgccagggc cgtaccgacg
     4381 ataatcgccg cgaaggcgag aggtaaggtt ttgggtcgta agctttccag ccaggcctgg
     4441 gtgcggctaa tttgttgttg ttcagtcata tttagcgcca ataaaaatgg ggcttttcag
     4501 ccccatcaac agtgatgaaa atgcattgga cgcgattata agataaaacg gcttagatct
     4561 tcatctgcga ccagcgcatc cagatgtttg ctcacatatt ccgcatcaat tgtgatgttt
     4621 tggccgtgca aatcgctggc gttataggaa atttcttcca tcagacgctc cagtacggta
     4681 tgcagacggc gcgcgccgat gttttcggtg gtttcgttaa cctgccaggc ggcttcggca
     4741 atacgtttaa taccggaatc ggtgaactcg atattgacgc cttcagttgc catcagcgct
     4801 ttatactgca cagtgacgga ggcgtttggc tcggtcaaaa tgcgttcgaa atcgctggtg
     4861 gtcagcgcct gaagttcaac gcgaatcggc agacggccct gcagttccgg gatcagatca
     4921 gacggcttcg ccacctggaa cgcgccagag gcgataaaca gaatatgatc cgttttgacc
     4981 atcccgtgtt tggtcgaaac cgtgcagcct tctaccagcg gcagtaagtc gcgctgtacg
     5041 ccttcgcgtg aaacatccgg gccggaggtt tcgccacgct tacaaatttt gtcaatttca
     5101 tcgataaaca cgatgccgtg ctgttcaacc gcgtcgatag cgtcctgttt cagctcttcc
     5161 gggttgacca gcttagcagc ttcttcttca accaacagtt tcatcgcgtc tttaattttc
     5221 agcttacgcg gtttctgttt ctgaccgcct aggttctgga atatagactg caactggctg
     5281 gtcatctcct ccatgcccgg aggcgccata atctctacgc ccatcggcgc ggcggcgagg
     5341 ttaatctcga tctctttatc gtcgagctgg ccttcgcgca gttttttgcg gaacgtttga
     5401 cgggcggcag aaggctcctg ctgctgttcg gcctggcccc agttattttt tgcgggtggg
     5461 atcagtacgt cgagaatacg ctcttccgcc aactcttccg cacgatagcg gtttttctcg
     5521 atagcctgta cgcgaaccat tttcacagcg gcatcggtca gatcgcggat gatagagtcc
     5581 acttctttcc cgacatagcc cacttcggtg aatttggtgg cttcgacttt aatgaacggc
     5641 gcgttggcga gttttgccag acgacgggcg atttcggttt taccgacgcc ggtcgggcca
     5701 atcatcagaa tatttttcgg cgttacttcg tggcgcagct cttcatcaag ctgcatacga
     5761 cgccagcggt tacgcaatgc aatcgccacg gaacgctttg cgttatcctg gccgataatg
     5821 tgtttgttca gttcgctgac aatttcgcgt ggggtcattt cagacatgag aggtccttac
     5881 gctttggcgg tcaattcttc aatggtgtgg aaatggttgg tgtaaatgca gatatcgcct
     5941 gcaatatcca acgccttttc agcaatttcg cgcgcgccga gctcggtatt ttccaacaga
     6001 gcgcgagcgg cagcctgggc ataaggaccg ccggagccga tagcaattaa atcgttttca
     6061 ggttgcacga catcgccgtt acccgtgatg atgagcgaag cggtttcatc cgcgacggcc
     6121 agcaacgctt ccagtttgcg tagcatacgg tcggtacgcc agtctttcgc cagttcaacg
     6181 gcggctttga ccaggtgccc ctgatgcatt tccagtttac gttcaaacag ctcgaacagc
     6241 gtgaatgcat cagcagtacc gcccgcaaag cccgcaatga ccttgtcgtt gtagaggcgg
     6301 cggactttct tcacgttgcc tttcattact gtgttaccca gtgtggcctg accatcaccg
     6361 gcgattacca cgtggccgtt acggcgtacg cttactattg ttgtcacgag cagacccctt
     6421 ggttactaat gctgaattgc ggccccgtac ggcgtacggg gcataatgca agtatagatg
     6481 ggggagattt tgagggtttc aacccccggt ggcgagtcga atgcagtttg tatggcccgc
     6541 catcttcaga cggttaatgg tgctgtcggc attttcttta cctttcaccg gcccgataac
     6601 cacgcgattc cagccgttat tggtggtaat tttggagtca aagccttcaa acgccagctg
     6661 agcgcggacg ctttctgcct gctcggcgcc tttgaatgaa ccacattgca ccatccagcg
     6721 acgttcatct tttttctctg ctgtcgcctt cggcgcttca ggcgcgcgcg taat
//
LOCUS       DAGWFR010000196         6748 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.199, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000196 DAGWFR010000000
VERSION     DAGWFR010000196.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 6748)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6748)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6748
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.199"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(193..1272)
                     /gene="fbaA"
                     /locus_tag="MOX77_004023"
     CDS             complement(193..1272)
                     /gene="fbaA"
                     /locus_tag="MOX77_004023"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016505616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase"
                     /protein_id="HCA3359421.1"
                     /translation="MSKIFDFVKPGVITGDDVQKVFQVAKENNFALPAVNCVGTDSIN
                     AVLETAAKVKAPVIVQFSNGGASFIAGKGVKTDVPQGAAILGAISGAHHVHQMAEHYG
                     VPVILHTDHCAKKLLPWIDGLLDAGEKHFAATGKPLFSSHMIDLSEESLHENIEICSK
                     YLARMSKIGMTLEIELGCTGGEEDGVDNSHMDASALYTQPEDVDYAYTELSKISPRFT
                     IAASFGNVHGVYKPGNVVLTPTILRDSQDYVSKKHNLPHNSLNFVFHGGSGSTAQEIK
                     DSVSYGVVKMNIDTDTQWATWEGVLNYYKENEAYLQGQLGNPKGEDQPNKKYYDPRVW
                     LRAGQTSMIARLEKAFKELNAIDVL"
     gene            complement(1374..2537)
                     /gene="pgk"
                     /locus_tag="MOX77_004024"
     CDS             complement(1374..2537)
                     /gene="pgk"
                     /locus_tag="MOX77_004024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005761248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HCA3359422.1"
                     /translation="MSVIKMTDLDLAGKRVFIRADLNVPVKEGKVTSDARIRASLPTI
                     ELALKQGAKVMVTSHLGRPTEGEYNEEFSLLPVVNYLKDKLSNPVRLVKDYLDGVDVA
                     EGELVVLENVRFNKGEKKDDEALSKKYAALCDVFVMDAFGTAHRAQASTHGIGKFADV
                     ACAGPLLAAELDALGKALKEPARPMVAIVGGSKVSTKLTVLDSLSKIADQLIVGGGIA
                     NTFVAAQGHSVGKSLYEADLVDEAKRLLTTCDIPVPTDVRVATEFSETAPATLKSVND
                     VKEDEQILDIGDASAQQLAEILKNAKTILWNGPVGVFEFPNFRKGTEIVANAIADSEA
                     FSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKVLPAVAMLEERAKK"
     gene            complement(2559..3605)
                     /gene="epd"
                     /locus_tag="MOX77_004025"
     CDS             complement(2559..3605)
                     /gene="epd"
                     /locus_tag="MOX77_004025"
                     /EC_number="1.2.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="erythrose-4-phosphate dehydrogenase"
                     /protein_id="HCA3359423.1"
                     /translation="MTVRIAINGFGRIGRNVVRALYESGRRAEITVVAINELADAAGM
                     AHLLKYDTSHGRFAWEVRHEREQLFVGDDVIRILHERTLADLPWRELGVDVVLDCTGV
                     YGNREHGEAHIAAGAKKVLFSHPGSNDLDATVVFGVNQNQLRAEHRIVSNASCTTNCI
                     IPVIKLLDDAYGIESGTVTTIHSAMNDQQVIDAYHSDLRRTRAASQSIIPVDTKLAAG
                     ITRIFPQFNDRFEAIAVRVPTINVTAIDLSVTVKKPVKASEVNQLLQKAAQGAFHGIV
                     DYTESPLVSIDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDNEWGFANRMLDTTLAMA
                     AVGFRLDASASTKL"
     gene            3979..4404
                     /locus_tag="MOX77_004026"
     CDS             3979..4404
                     /locus_tag="MOX77_004026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HCA3359424.1"
                     /translation="MTVSHHNASTARFYALRLLPGQEVFSQLHAFVQQNQLHAAWIAG
                     CTGSLTDVALRYAGQEATTSLTGTFEVISLNGTLELTGEHLHLAVSDPYGAMLGGHMM
                     PGCTVRTTLELVIGELPALTFSRQPCAISGYDELHISSR"
     gene            4430..5008
                     /locus_tag="MOX77_004027"
     CDS             4430..5008
                     /locus_tag="MOX77_004027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECF transporter S component"
                     /protein_id="HCA3359425.1"
                     /translation="MARRPFSSQSLVLIVIAIAINMIGGQLISMLKLPIFLDSIGTLI
                     SAVLLGPFIGMLTGLLTNLLWGLLTDPIAAAFAPVAMVIGLVAGWLARAGWFRTLPKV
                     IVSGVVITLAVTLVAVPLRTALFGGVTGSGADLFVAWMHSMGQNLVESVAITVIGANL
                     VDKILTAIIVWVLLRQLPLRTTRHFPAMSAVR"
     gene            5009..5716
                     /locus_tag="MOX77_004028"
     CDS             5009..5716
                     /locus_tag="MOX77_004028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter transmembrane
                     protein EcfT"
                     /protein_id="HCA3359426.1"
                     /translation="MHPFTSLTLWALAACTTLLLPAQTVFPVYSAAAFLCLLALKSTR
                     RRAKYVAWLMLSLGFGLWLVHGGWLTEWISGQPRDPQRWVYAVTLWLRLLAIVSTSQL
                     WMQYVPVQRFIRALFASRLPPGIAYLFAGPLLVVEQLKRQLTIVHEAQRARGVPLDEG
                     WYQRLRAMPALIVPLTQNALNDLTIRGAALDMRGFRLHRARTTLWAPKDSMLQRVARY
                     GMVLLILAEAGVWIWLR"
     gene            5704..6381
                     /locus_tag="MOX77_004029"
     CDS             5704..6381
                     /locus_tag="MOX77_004029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor ABC transporter
                     ATP-binding protein"
                     /protein_id="HCA3359427.1"
                     /translation="MVTLEQFRYLPSDATRPPACFDFHYSTPGIVAIVGDNGSGKSTL
                     AQLMAGWYPDYLPGDIDGTGLLLGVPIGRLPLVEQSPTIHLVQQSPYLQLSGCTFSVE
                     EEVAFGPENLGLHEAEILRRIDEALTLTNCQSLRHRHPGTLSGGETQRVVIASALAMQ
                     PRLLVLDEAFSRLTSAATGTLLERLQQWALERHSLIVLFERNHFPFLTRCQRVWQLRN
                     GALTPLC"
     gene            6375..>6748
                     /locus_tag="MOX77_004030"
     CDS             6375..>6748
                     /locus_tag="MOX77_004030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HCA3359428.1"
                     /translation="MLTLNQVAYRWPDAAADCLHAISLELRDGEWLALTGDNGAGKST
                     LLRIMAGLLSPTSGSVTLNGEPIAQLKNRQRAAAIGVLFQEAENQIFHSNVAQEVAFG
                     LKLQRLSAEDISRRTQAALRLC"
BASE COUNT         1446 a         1841 c         1813 g         1648 t
ORIGIN      
        1 cattgggacc cccttttgat ttcttgttga acttttgcag ttgccagacc gcaagatgtt
       61 ttaacaaatc aaaaggggtt ttaataactg gcttaaagct gaaagctttc cggaaccccc
      121 agcctagctg ggggttttcc atagacaaaa aaatggcttc ccgagggaag ccatttcaat
      181 cagcagacta tattacagaa cgtcaatcgc gttcagttct ttaaatgctt tttccagacg
      241 agcgatcatc gaagtctggc cagcacgcag ccatacgcgc gggtcatagt atttcttgtt
      301 cggctgatct tcgcctttcg ggttgcccag ctgaccttgc agatacgctt cgttttcttt
      361 gtagtaattc agaacacctt cccaggttgc ccattgggta tcggtatcga tgttcatttt
      421 cactacgccg tagcttacgg agtctttgat ttcctgagca gtagaaccgg aaccgccgtg
      481 gaaaacgaag ttcaggctgt tgtgcggcag gttgtgtttc ttagaaacat agtcctgaga
      541 atcacgcagg atggtcgggg tcagaaccac gttacccggc ttgtaaacgc cgtgtacgtt
      601 accgaaggaa gcggcaatgg tgaaacgcgg gctgattttg ctcagctcag tgtacgcgta
      661 atcaacatct tccggctggg tgtacagagc agaagcgtcc atgtggctgt tgtccacgcc
      721 gtcttcttcg ccaccggtgc aacccagttc gatttccaga gtcatgccaa ttttggacat
      781 gcgcgccagg tatttggagc agatttcgat gttttcgtgc agagactctt cagacaggtc
      841 aatcatgtga gaagagaaca gcggtttacc ggtagccgcg aagtgttttt cacccgcgtc
      901 cagcagaccg tcgatccacg gcagcagttt cttcgcgcag tggtcagtgt gcaggataac
      961 cggcacgccg tagtgttcag ccatctggtg aacgtgatgc gcgccagaga tagcgcccag
     1021 gattgccgcg ccctgaggta cgtcagtttt cacgccttta cccgcgatga aggacgcgcc
     1081 gccgttggaa aactgaacga tgaccggtgc tttaactttt gcagcggttt ccagaacagc
     1141 gttgatggaa tcagtgccca cgcagttaac tgccggcaga gcaaaattgt tttcttttgc
     1201 tacctggaac actttctgta cgtcatcacc agtgatcacg cctggtttta cgaaatcaaa
     1261 aattttagac atgtttcgtt gtcctgtatc gtcgggcttt gggaaaaaac acgggccgcc
     1321 ctgaatgtca gatcggcgat aaatcaacgg gcaggaatcc ctgcccgtaa cgattacttc
     1381 ttagcgcgct cttcgagcat cgctacggct ggcagaactt taccttccac gaattcgagg
     1441 aatgcgccgc cgccagtaga aatgtaggaa attttgtcag caatgccgaa caggtcgatt
     1501 gccgccaggg tgtcgccgcc gccagcgatg gaaaacgctt cgctatcagc gatggcattc
     1561 gccacgattt cagtcccttt acggaagttc gggaactcaa acacgccaac cgggccgttc
     1621 cacagaatgg ttttggcatt cttgaggatt tcagccagct gctgagcgga agcatcgccg
     1681 atatccagga tctgctcgtc ttctttcacg tcgttaacgg atttcagagt cgctggtgcg
     1741 gtttcggaga actcggtggc aacgcgaaca tcggtcggaa ccgggatatc gcaagtggtc
     1801 agcagacgtt ttgcttcgtc aaccaggtca gcttcgtaca gggatttacc gacgctgtgg
     1861 ccctgagcgg caacgaaggt gttggcgata ccgccgccga caatcagctg gtcagcgatt
     1921 ttagacaggg aatccagaac agtcagtttg gtagatactt tagaaccacc aacgatagcc
     1981 accatcggac gagccggctc tttcagcgct ttacccagtg catccagttc agcggccagc
     2041 agcgggcctg cgcacgcgac gtcagcaaat ttgccgatac cgtgggtaga agcctgcgcg
     2101 cggtgcgcag taccaaaggc gtccatcaca aatacgtcac acagggcggc atatttttta
     2161 gacagcgctt cgtcgtcttt cttttcgcct ttgttaaagc gaacgttttc cagaaccacc
     2221 agctcacctt cggccacgtc aacgccgtcc aggtaatctt tgaccaggcg aaccgggtta
     2281 gacagtttgt ctttcaggta gttaacaacc ggcagcagag agaattcttc gttgtactcg
     2341 ccttcggtag gacgacccag gtgggaagtt accatcactt tcgcgccctg tttcagagcc
     2401 agttcgatgg tcggcagaga agcgcggata cgcgcgtcgc tggtcacttt cccttcttta
     2461 acaggtacgt tcagatccgc acggataaaa acgcgtttcc cggccagatc cagatcggtc
     2521 atcttaatta cagacatggt gaatcctctc aatgatgctt aaagttttgt cgacgctgac
     2581 gcgtcgagcc tgaaaccaac tgcggccatc gctaacgtgg tgtcgagcat cctgttagca
     2641 aagccccatt cattatcgca ccagaccagc gtcttgatca ggtgggcgcc actgacccgg
     2701 gtttgcgtgc catcaacaat ggcgctgtgc gggtcgtggt taaaatctat cgagaccaac
     2761 ggtgattccg tatagtcaac tataccatga aatgcacctt gtgctgcttt ttgcagcaac
     2821 tggttgactt cactagcttt tactggtttt ttcaccgtta cgcttaaatc gatcgccgtc
     2881 acattaatgg ttggaacgcg caccgcaatc gcctcaaaac ggtcgttaaa ctgcgggaat
     2941 atacgcgtaa tgcctgccgc cagttttgta tctaccggga taatcgactg gctggccgcg
     3001 cgcgtgcgcc gtagatcgga gtgatacgcg tcgatcacct gctgatcgtt catcgcggag
     3061 tggatcgtcg tgacggtacc agactcgatg ccgtaagcat catccaacaa tttaatgacg
     3121 ggaattatgc aattcgtggt acaggacgcg tttgagacaa tacgatgttc cgcacgcagt
     3181 tggttctggt tcacgccaaa aacgacggtg gcgtcaagat cgttgctgcc cggatgagaa
     3241 aagagcactt tcttcgcgcc agcggcaata tgcgcctcgc catgctcccg gttgccatat
     3301 acgcccgtac aatccaacac gacatccacg cccagttcgc gccacggcag atccgccagc
     3361 gttcgttcat gcagaatacg aatgacatcg tcgccgacaa aaagctgctc gcgctcgtgg
     3421 cgaacctccc atgcaaaacg cccgtggctg gtatcgtatt tcaacaaatg cgccatgcct
     3481 gcggcatccg ccagctcgtt gatggccacc acggtaattt ccgcccgacg tccggattca
     3541 tacaaagcac gaaccacgtt acgcccgatg cgaccaaagc cattaatcgc tatgcgtacg
     3601 gtcataggtc tcctgcaagg ctatcccgat tcagatgagg ctgacagagt aatgcagctt
     3661 atcgtcgagt aaaacctcac ctgtcgcaaa ctgcgactga ttggttaatt gtcgaacatt
     3721 taattaactg aaacgcttca gctagaataa gcgaaacggg gaataaaagg aatgtttgtc
     3781 cagtcgaaga agacagttat ctgacctgca tcacatttca tggccgctta cgctgcaatt
     3841 tattccatat ttaagaatca ccagtacatc cgtcagatct tttcatcgtc gcgtcacaaa
     3901 tactgattta tatcagaaag cgctgtcgcc agcgtctata ttatcagcgc cacgtccgag
     3961 tctcggagtc ctgtaacgat gactgtatct caccacaatg cctctacagc gcgcttttac
     4021 gcgcttcgtc tgcttcccgg ccaggaagtg ttttcccaat tacacgcctt tgtgcaacag
     4081 aaccaattac atgccgcctg gattgcaggg tgtaccggca gtctgaccga cgttgcgctg
     4141 cgttatgccg ggcaagaagc gaccacatcg ctcaccggca cgtttgaagt tatctcgcta
     4201 aacggcacgc ttgaattgac cggcgagcat ctgcatctcg cggtatcgga tccctacggg
     4261 gccatgctcg gcggccatat gatgccaggg tgtaccgtgc gtaccacgct ggagctggtt
     4321 atcggcgagc tgccagcgct gacgttcagc cgtcaaccgt gcgccatttc cggttatgac
     4381 gaactgcata tttcttcccg ttaattgacg actctttaag aggtacttta tggcgcgtcg
     4441 cccgttttcc agccagtctc tggtgctgat tgtcatcgct attgccatca atatgattgg
     4501 cggacagctt attagcatgt tgaagctgcc tatttttctc gactcgatcg gcaccttaat
     4561 tagcgcggta ctgttagggc cgttcatcgg catgttgact gggcttctga ccaacttgct
     4621 gtgggggctg cttaccgacc ctatcgctgc cgcgtttgcc ccggtagcga tggttatcgg
     4681 tctggtcgcc gggtggctgg cgcgcgcagg ctggtttcgt accctgccca aagtgatcgt
     4741 cagcggggtc gtcattacgt tggcggtgac gctggtcgcc gtaccgcttc gtaccgcgct
     4801 ttttggcggc gttaccggta gcggcgctga tttgttcgtc gcctggatgc attcaatggg
     4861 ccaaaacctg gtggagtcag tcgcgattac cgtcataggc gctaatctgg tcgataaaat
     4921 tctgacggcg atcatcgttt gggtgctgct gcgtcagcta ccgttacgta cgacacggca
     4981 ttttcctgcg atgtcagccg tacgctaaat gcatccgttt acctcgttaa ccttatgggc
     5041 gttggcggcc tgcaccacgc tgctactccc tgcgcagacc gtgttcccgg tttatagcgc
     5101 ggcggccttc ctctgtctgc tggcgctgaa atcaacgcgg cggcgggcga agtatgtcgc
     5161 ctggctgatg ctgtctttag ggtttgggct atggctggta catggcggtt ggctaacgga
     5221 atggataagc gggcagcctc gcgatccgca gcgctgggta tatgccgtta cgctatggct
     5281 acgtctgctg gcgatcgtgt cgacgtcgca gctatggatg cagtatgtgc cggttcagcg
     5341 gtttattcgc gccctgttcg cttcacgtct gccacccggc atcgcttacc tgttcgctgg
     5401 cccgctgctg gtcgtcgaac agctcaaacg acaactgacg atcgttcatg aagcccagcg
     5461 cgcgcgcggc gtaccgctgg atgaaggctg gtatcagcgg ctacgggcaa tgcctgcgct
     5521 gatcgtgccg cttacgcaaa atgcgcttaa cgatctgaca atacgcggcg cggcgttgga
     5581 tatgcggggg tttcggctgc atcgagcccg aaccacgctg tgggcgccga aagatagcat
     5641 gttacaacgg gttgcgcggt atggcatggt actgctaata ctggcggaag cgggagtatg
     5701 gatatggtta cgttagagca gtttcgttat cttccgtccg atgcgacacg cccgccggca
     5761 tgttttgatt tccactattc aacacccgga atagtggcga tagtcggcga taacggcagc
     5821 ggaaaaagta cgctggcgca actgatggct ggctggtatc cggattatct ccccggcgat
     5881 attgacggca caggcctact gcttggcgta cctatcgggc ggctcccgct ggtagaacag
     5941 tcgcccacca tccacctggt gcagcaatcg ccttatttac agctttccgg ctgtaccttt
     6001 agcgtagagg aagaggtggc gtttggcccg gagaatctcg gcctccatga agcggaaatt
     6061 ctacggcgca ttgacgaggc gctgactctg acaaactgcc agtcgttacg ccatcgccat
     6121 cccggcacgc tctccggcgg cgaaacgcag cgggtagtga ttgccagcgc gcttgccatg
     6181 cagcccagat tattagttct tgatgaagcc ttcagtcggc tgacgtcagc ggccaccggg
     6241 acactgctgg aacggttaca acagtgggcg ctggaacgtc attctctcat tgtgcttttt
     6301 gagcgtaatc atttcccctt tctgacgcga tgccagcggg tatggcaatt gcgcaacgga
     6361 gcgctaaccc cattatgttg acgttaaatc aggtcgctta tcgctggcca gatgccgcag
     6421 ccgactgtct gcacgccatc tcgcttgaac ttcgtgacgg cgaatggctg gcgttgaccg
     6481 gcgataacgg cgcgggaaaa tcaacgctgt tacggattat ggccggcctg ctttccccca
     6541 cttccggctc ggtaacgctt aatggagagc cgattgcgca gcttaaaaat cgtcaacgcg
     6601 ccgccgctat cggcgtactc tttcaggaag cggaaaacca gattttccac agcaatgtcg
     6661 cacaagaggt cgcttttggg ctgaaactac agcgcttatc ggcggaggat atttcacggc
     6721 gcacgcaggc cgcgctgcgg ttatgcca
//
LOCUS       DAGWFR010000197         6601 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.200, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000197 DAGWFR010000000
VERSION     DAGWFR010000197.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 6601)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6601)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6601
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.200"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(73..1791)
                     /gene="proS"
                     /locus_tag="MOX77_004031"
     CDS             complement(73..1791)
                     /gene="proS"
                     /locus_tag="MOX77_004031"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012133963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HCA3359429.1"
                     /translation="MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLP
                     TGLRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGER
                     PFVLGPTHEEVITDLVRNELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDA
                     YSFHTSQESLQETYDAMYAAYSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGE
                     DDIVFSDVSDYAANIELAEAIAPQTPRAAATQEMTLVDTPNAKTIAELVEQFNLPIEK
                     TVKTLLVKAVKDSKSPLVALLVRGDHELNEVKAEKLPHVASPLTFATEEEIRAVINAG
                     PGSLGPVNMPIPVIIDRTVAAMSDFAAGANIDGKHYFGINWDRDVATPVVADIRNVVA
                     GDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCYGIGVTR
                     VVAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVL
                     MDDRKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIVDYL
                     VKAIKG"
     gene            complement(1902..2609)
                     /gene="tsaA"
                     /locus_tag="MOX77_004032"
     CDS             complement(1902..2609)
                     /gene="tsaA"
                     /locus_tag="MOX77_004032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase
                     TrmO"
                     /protein_id="HCA3359430.1"
                     /translation="MSSFQFDQIGVIRSPYKEKFAVPRQPGLVKSACGELHLIAPYNQ
                     ADAVRGLEAFSHLWVLFVFHQTMDGGWRPTVRPPRLGGNARMGVFATRSTFRPNPIGM
                     SLVALKGIECRKESVILKLGSLDLVDGTPVVDIKPYLPFAEALPDAAASYAQQAPIAE
                     MPVSFTAEVAQQLTTLERRYPQLRTFICDVLAQDPRPAYRKGEETGKTYAVWLHDFNV
                     RWRVVNTGFEVFALEPR"
     gene            complement(2606..3010)
                     /gene="rcsF"
                     /locus_tag="MOX77_004033"
     CDS             complement(2606..3010)
                     /gene="rcsF"
                     /locus_tag="MOX77_004033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rcs stress response system protein RcsF"
                     /protein_id="HCA3359431.1"
                     /translation="MRALPICLLALMLGGCSMLSRSPVEPVQSTATPPKAEPEKPKAP
                     RAAPVRIYTNAEDLVGKPFRDLGEVSGESCQATNQDSPPNIPTARKRMQINASKMKAN
                     AVLLHSCEITSGTPGCYRQAVCIGSALNISAK"
     gene            complement(3129..3944)
                     /gene="metQ"
                     /locus_tag="MOX77_004034"
     CDS             complement(3129..3944)
                     /gene="metQ"
                     /locus_tag="MOX77_004034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter substrate-binding
                     lipoprotein MetQ"
                     /protein_id="HCA3359432.1"
                     /translation="MAFKFKTFAAVGALIGSLALAGCGQDEKDPNHIKVGVIVGAEQQ
                     VAEVAQKVAKEKYGLDVELVTFNDYVLPNEALSKGDIDANAFQHKPYLDQQIKDRGYK
                     LVSVGKTFVYPIAGYSKKIKSLDELKDGSQVAVPNDPTNLGRSLLLLQKVGLIKLKDG
                     VSLLPTSLDIVENPKNLKIVELEAPQLPRSLDDAQIALAVINTTYASQIGLTPAKDGI
                     FVEDKDSPYVNLIVTREDNKDAENVKKFVQAYQSDEVYEAANKVFNGGAVKGW"
     gene            complement(3983..4636)
                     /gene="metI"
                     /locus_tag="MOX77_004035"
     CDS             complement(3983..4636)
                     /gene="metI"
                     /locus_tag="MOX77_004035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter permease MetI"
                     /protein_id="HCA3359433.1"
                     /translation="MSEAMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPG
                     QIMENARLYRSLSAVVNIFRSIPFIILLVWMIPFTRIIVGTSIGLQAAIVPLTVGAAP
                     FIARIVENALLEIPAGLIEASRAMGATPLQIVRKILLPEALPGLVNAATITLITLVGY
                     SAMGGAVGAGGLGQIGYQYGYIGYNATVMNTVLVLLVVLVYLIQLSGDRIVRAVTHK"
     gene            complement(4629..5660)
                     /gene="metN"
                     /locus_tag="MOX77_004036"
     CDS             complement(4629..5660)
                     /gene="metN"
                     /locus_tag="MOX77_004036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014168731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein
                     MetN"
                     /protein_id="HCA3359434.1"
                     /translation="MIKLSNITKVFQQGARTIQALNNVSLHVPAGQIYGVIGASGAGK
                     STLIRCVNLLERPTEGSVMVGGQELTTLSESGLTKARRQIGMIFQHFNLLSSRTVFGN
                     VALPLELDNTPKEEIKRRVTELLDLVGLGDKHDSYPANLSGGQKQRVAIARALASNPK
                     VLLCDEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGE
                     LIEQDTVSEVFSHPKTPLAQKFIQSTLHLDIPEDYQARLKASPETDSVPMLRMEFTGQ
                     SVDAPLLSETARRFNVNNNIISAQMDYAGGVKFGIMLTEMHGTQEETQAAIAWLQDHH
                     VKVEVLGYV"
     gene            5850..6416
                     /gene="gmhB"
                     /locus_tag="MOX77_004037"
     CDS             5850..6416
                     /gene="gmhB"
                     /locus_tag="MOX77_004037"
                     /EC_number="3.1.3.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1,7-bisphosphate
                     7-phosphatase"
                     /protein_id="HCA3359435.1"
                     /translation="MAKSVPAIFLDRDGTINVDHGYVHEIDAFEFIDGVIDAMRELKK
                     MGYALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSIEE
                     FRQVCDCRKPHPGMLISARDFLHIDMAASYMVGDKLEDMQAAAAANVGTKVLVRTGKP
                     VTAEAENAADWVLNSLADLPSAIKKQQK"
BASE COUNT         1618 a         1728 c         1707 g         1548 t
ORIGIN      
        1 aaaaggcctc gcagggtgcg aggcctttac atatctgccg gatggcgccg ggcaatccca
       61 acaaaatgtc gtttagcctt taatcgcctt gaccagataa tcaacgatat cgccggtttt
      121 aatcagcgat ttttcaccgc tacgacggta tttatactca atatcgtcgt tatccaggtt
      181 gcgatcgcca atcacgatag tatgtggaat accaatcagc tccatatcgg caaacatcac
      241 gcccgggcgc tctttacgat cgtccatcag cacttcaatg ccctgcgcgc gcaattcgct
      301 gtacagcttt tccgccagct cctgcacacg gaaggatttg tgcatattca tcggcagaat
      361 agcgacctgg aaaggtgcaa tggcgtcagg ccatacaatg ccgcgctcgt caaagttctg
      421 ctcgatagcc gcggcaacga cacgtgttac gccgatacca tagcagccca ttgtcaggat
      481 ctggttacgg ccatcttcac cctgaacgga ggctttcagc gcttctgagt acttggtacc
      541 taactggaag atgtgaccca cttcgatacc gcgtttgata agcaacgttc cctgaccatc
      601 cggactcgga tcgccggcga ctacgttacg gatgtcggca acaacaggcg tcgccacatc
      661 gcgatcccag ttaataccaa agtagtgttt accgtcgatg ttagcgccag cggcaaaatc
      721 gctcatggcg gcaacggtac gatcgatgat gaccggaatc ggcatattga ccgggccgag
      781 ggagccaggg ccggcattaa ttacggcgcg aatctcttct tcagtagcga aggtcagcgg
      841 gctggcaacg tgcggcagtt tttccgcttt aacttcattc agttcatgat cgccgcgaac
      901 cagcagagcc accagcggag acttgctgtc tttcaccgct ttcaccagca gcgtttttac
      961 cgttttttca attggcaggt tgaattgttc caccagctcc gcgatggttt tggcatttgg
     1021 cgtatcgacc agagtcattt cctgcgtcgc cgctgcgcgc ggtgtttgcg gcgcgatagc
     1081 ttctgccagt tcaatgttag ccgcgtaatc agaaacatca gagaaaacga tatcgtcttc
     1141 gccgctttgc gccagcacct ggaattcatg cgaggcgttg ccgccgatag aaccggtatc
     1201 ggcctgtacc gcgcggaaat ccagccccat acggctgaag atacggctat acgcggcgta
     1261 catggcgtca taggtttcct gcaacgactc ctgagaggtg tggaaagagt aagcatcttt
     1321 catcaggaat tcgcgcgaac gcatcacgcc aaagcgcgga cgcacttcat cacggaattt
     1381 ggtctggatt tggaagaagt tcagcggcaa ctgcttataa gagctgagtt cattacgcac
     1441 caggtcggtg ataacttctt cgtgggtcgg gccgagtacg aacggacgct cgccacggtc
     1501 gacaaaacgc agcagttccg gaccgtactg ttcccaacga ccactctctt gccacaggtc
     1561 ggctggctga acgactggca tcgacacctc gatagcaccg gcgttgttca tctcttcacg
     1621 cacgatgttt tcgacttttt tcaggacgcg caggccggtc ggcagccagg tatataaccc
     1681 ggaggcgagc ttgcggatca tcccggcgcg cagcatcagc tggtggctga taacctcggc
     1741 gtcggcaggt gtctccttca gagtggagag caggtattgg ctagtacgca tgttgttacg
     1801 gttccagttg aacgatcgaa caggctcaat gtgagcctga tacaaaaaaa gtgatttagt
     1861 ttaccagcgt gcaagagatg tcaaaagaga agggcgtgaa attaccgtgg ttccagcgca
     1921 aacacttcaa atccggtgtt aaccacacgc cagcgcacgt taaaatcatg cagccagacg
     1981 gcataggttt tgcccgtctc ttcaccctta cgataagccg ggcgaggatc ttgcgccagc
     2041 acatcgcaaa taaatgtccg tagctgcgga taacgccttt ccagcgtcgt aagctgttga
     2101 gccacttcag cggtaaaact cacaggcatt tcagctatcg gcgcctgttg cgcatagctg
     2161 gcggcggcgt ccggtaaggc ctcggcaaac ggtaaatacg gtttgatatc caccaccggc
     2221 gtgccatcca ccagatccag actgcctaat ttcagaatta cgctctcttt ccggcactcg
     2281 atacctttta gcgcaacgag cgacatgcca atcggattgg ggcggaacgt ggagcgcgtg
     2341 gcaaaaacgc ccattctggc gttaccgcca agacggggcg gacgaactgt tggccgccag
     2401 ccgccgtcca tcgtctgatg aaaaacgaaa agcacccaca aatggctgaa cgcttccagg
     2461 ccgcgaacgg catcggcctg gttgtaaggc gctatcagat gcagttcgcc gcaggcgctt
     2521 ttgaccagac caggctggcg cggaacggcg aatttttctt tataggggga gcgaataacg
     2581 ccgatttgat caaactgaaa gctgctcatt tcgccgaaat attcagggcg gacccgatac
     2641 aaaccgcctg acggtagcag cctggcgtgc cgctggtaat ttcacagctg tgcagcagga
     2701 cggcgttggc tttcatttta gatgcattaa tctgcatacg cttgcgcgca gttggaatgt
     2761 taggcggaga gtcttgattt gtcgcctggc aggattcgcc gctaacctcg ccaagatcgc
     2821 ggaaaggttt gccgactaag tcttcagcat tggtgtaaat cctgacggga gcggcacgcg
     2881 gcgctttagg tttctccggc tccgcttttg gcggggttgc ggtgctttga acaggttcaa
     2941 caggggatct gcttagcatg gaacaaccgc ccagcatgag tgccaataaa cagatcggta
     3001 aagcacgcat aatatttcct caatgaatgt tctaattgcc agatattgaa tcaggagctt
     3061 gcataaatga caagacgggc aatagcccgt cctgaataat attacagatt gtggaatcag
     3121 cctaaaactt accagccttt caccgcgccg ccattaaaaa ctttatttgc ggcttcgtac
     3181 acttcatcag actggtaagc ctgaacgaat tttttcacat tctcggcgtc tttgttatct
     3241 tcacgcgtca cgatcaagtt aacgtacgga gaatctttat cttcaacgaa gataccgtct
     3301 ttcgctggcg tcaggccaat ctggctggcg taagtcgtat tgatgaccgc taacgcgatc
     3361 tgagcgtcat ccagcgaacg cggcaactgc ggcgcttcca gctcaacaat tttcagattt
     3421 ttcgggtttt cgacgatatc cagcgaggta ggaagcagac tgacgccgtc tttcagttta
     3481 atcagcccta ctttttgcag cagcagcagg gaacgaccaa ggttggtcgg gtcgttaggc
     3541 acagcgacct gggaaccgtc cttgagctca tccagagatt tgattttttt ggaatatcct
     3601 gcaatgggat agacaaaagt cttaccaacg gaaaccagtt tgtagccgcg atctttgatt
     3661 tgctgatcca gatacggttt gtgctggaag gcattggcat cgatatcgcc tttgctcagc
     3721 gcttcattag gcagaacata atcattaaag gtcaccaatt ccacgtccag gccgtatttt
     3781 tctttcgcga ctttctgcgc gacttcggca acttgctgct ctgcgccaac gattacgccg
     3841 actttaatat gattcggatc tttttcatcc tgaccgcaac ccgcaagtgc cagagaacca
     3901 atcagagcac ccactgccgc aaaggttttg aatttgaacg ccatgcttat ttccttaatg
     3961 agtatttgtg ttgtgtttaa cgttacttat gcgtgacagc cctgacgatg cgatcgccgg
     4021 ataactgaat taaataaacc agaacgacaa gtaataccag caccgtattc atcacggtag
     4081 cattgtatcc aatataaccg tactgatagc cgatttgacc gaggccgcct gcgccgacgg
     4141 cgccgcccat tgcggagtaa ccgaccaggg tgattagtgt aatggttgcc gcattcacca
     4201 gaccaggcag cgcttccggt aaaaggattt tacgtacaat ttgcagcggc gtggcgccca
     4261 tcgctcgcga ggcttcaatc agcccggcag ggatctctaa caacgcattt tccactatac
     4321 gggcgataaa aggcgcggcg ccgacggtca gcggtacaat cgcggcctgc aaaccaatgg
     4381 aggtgccgac aattattcgg gtaaaaggaa tcatccacac caacaggatg ataaagggaa
     4441 tcgagcggaa aatattgacc accgcagaga gggagcgata cagcctggcg ttctccataa
     4501 tctgccccgg gcgcgtaaca tacagcaata cgccaaccgg caggccaatc acgaaaccga
     4561 agaaaccgga gacaaaggtc atcgccagcg tttcccagac gccacgaacc agtaaccaca
     4621 tcattgcctc agacataacc cagtacctct actttcacat ggtgatcctg cagccaggca
     4681 attgcggctt gcgtctcttc ttgtgtgccg tgcatttccg ttagcataat gccgaacttc
     4741 acaccgcccg cgtaatccat ctgtgcgctg ataatattat tgttcacgtt gaaacgacgc
     4801 gcggtttcag aaagcagcgg ggcatccaca gactgtccgg tgaactccat gcgcagcatc
     4861 ggcacgctgt cagtttccgg cgacgctttc aaacgcgcct ggtaatcttc cggaatgtcc
     4921 agatgcagag tggactgaat aaacttctgc gccagcggcg ttttaggatg cgagaagact
     4981 tcgctgaccg tatcctgctc aataagctcg ccattactga tgacggcaac gcagtcgcag
     5041 atacgtttta cgacatccat ttcatgagtg ataagcagaa tcgtcaaccc cagacgacgg
     5101 ttgatatctt tcagcaattc cagaatcgaa cgggtcgtcg cgggatcaag cgcgctggtg
     5161 gcttcatcgc acagcaacac ttttggatta ctggctaacg cgcgggcaat cgcgacacgc
     5221 tgtttctgac cgccggaaag atttgccgga tagctgtcgt gcttgtcgcc aagaccgact
     5281 aaatccagca gctctgtgac acggcgtttg atctcttcct ttggtgtgtt atccagttcc
     5341 agcggcaacg cgacgttgcc aaacacggta cgggaagaga gcaggttaaa atgttggaaa
     5401 atcatgccga tttgacggcg agctttggtc aacccggact ctgaaagcgt tgtcagctcc
     5461 tgaccgccta ccattacgct tccttcagta ggacgttcaa gtaagtttac gcagcgaatg
     5521 agcgtacttt taccggcgcc ggaggcgccg atgacgccgt aaatttgtcc ggcagggaca
     5581 tgcaggctga cattgttcag cgcctgaatg gtgcgcgccc cctgctggaa cactttggta
     5641 atattcgaaa gtttaatcat tgattcttta ttatcgtaat gaaatgagcg gaggcatttt
     5701 cgtctgccta atacggtcaa cgccgtcaac agaatggatg ttaaggcatc cagacgtcta
     5761 aatcaatcag gctttatacg atgagcactt tcttgcctgc tgaaacatgc gatactagcg
     5821 ccacttgctt tactcaggag ctataaaagg tggcaaagtc tgtacccgca atttttctcg
     5881 accgtgacgg caccattaat gtggatcacg gctacgtaca tgaaatcgat gcatttgagt
     5941 ttatagacgg cgttattgac gcgatgcgcg agctaaaaaa aatgggctat gcgctggtgg
     6001 tggtgacgaa ccagtccgga atcgcgcgcg gcaaattcac tgaggcgcag tttgaaacgt
     6061 taaccgaatg gatggactgg tcgttggcgg atcgcgatgt tgatttggac ggcatctatt
     6121 attgtcctca ccatccgcag ggcagcatag aagagttccg tcaggtatgt gattgccgca
     6181 agccgcatcc aggaatgctt atctcggcgc gtgatttcct gcatatcgat atggcggctt
     6241 cttatatggt gggagacaag ctggaagata tgcaggcggc agcggcggca aatgtcggga
     6301 caaaagtgct ggtgcgtacg ggcaaaccgg tcacggcaga agcagaaaac gcggcggact
     6361 gggtgttaaa cagccttgct gacctgccat cagcgataaa aaagcagcaa aaataagcgt
     6421 tatggataaa agatgagcgg ttaaaacaaa aatgcatttt tccgcttgtc ttcctgaacc
     6481 gactccctat aatgtgcctc catcgacacg gcggatgtga atcacttcac acaaacagcc
     6541 ggtcggttga agagaaaaat cctgaaattc agggttgact ctgaaagagg aaagcgtaat
     6601 a
//
LOCUS       DAGWFR010000198         6477 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.201, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000198 DAGWFR010000000
VERSION     DAGWFR010000198.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 6477)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6477)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6477
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.201"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..413
                     /locus_tag="MOX77_004038"
     CDS             <1..413
                     /locus_tag="MOX77_004038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001219848.1"
                     /note="ligates
                     L-alanyl-gamma-D-glutamyl-meso-diaminopimelate to
                     UDP-N-acetylmuramic acid for reincorporation into
                     peptidoglycan; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-
                     meso-diaminopimelate ligase"
                     /protein_id="HCA3359436.1"
                     /translation="NGVTVYDDFAHHPTAILATLAALRGKVGGTARIIAVLEPRSNTM
                     KMGLCKDDLAPSLGRADEVFLLQPPHIPWQVSEVADACVQPAHWSGDVDTLADMVVKT
                     AQPGDHILVMSNGGFGGIHQKLLDGLAKKALVVG"
     gene            complement(520..1071)
                     /locus_tag="MOX77_004039"
     CDS             complement(520..1071)
                     /locus_tag="MOX77_004039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated protein"
                     /protein_id="HCA3359437.1"
                     /translation="MTKQPEDWLDDVPGDDIEDEDDEIIWVSKSEIKRDAEELKRLGA
                     ELVDLGKNALDKIPLDADLRDAIELAQRIKMEGRRRQLQLIGKMLRQRDVEPIRQALD
                     KLKNRHNQQVVLFHKLEHLRDRLIVEGDDAVAEVLTLWPHADRQQLRSLIRNAKKEKE
                     GNKPPKSARQIFQYLRELAENEG"
     gene            1167..2519
                     /gene="pmbA"
                     /locus_tag="MOX77_004040"
     CDS             1167..2519
                     /gene="pmbA"
                     /locus_tag="MOX77_004040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease PmbA"
                     /protein_id="HCA3359438.1"
                     /translation="MAFAMKVISQVEAQRKILEEAVSTALELASGKSDGAEVAVSKTT
                     GISVSTRYGEVENVEFNSDGALGITVYHQNRKGSASSTDLSPQAIARTVQAALDIARY
                     TSPDPCAGVADKELLAFDAPDLDLFHPAEVTPDEAIELAARAEQASLKADKRITNTEG
                     GSFNSHYGIKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGRAMADLQA
                     PEWVGAECARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGAVYRKSTFL
                     LDSLGKQILPEWLTIEEHPHLLKGLASSPFDSEGVRTERRDIVKDGVLTQWLLTNYSA
                     RKLGLKSTGHAGGIHNWRIAGQGLNFEQLLKEMGTGLVVTELMGQGVSGITGDYSRGA
                     AGFWVENGEIQYPVSEITIAGNLKEMWRNIVTVGDDIETRSNIQCGSVLLPEMKIAGQ
                     "
     gene            2617..3003
                     /gene="cybC"
                     /locus_tag="MOX77_004041"
     CDS             2617..3003
                     /gene="cybC"
                     /locus_tag="MOX77_004041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b562"
                     /protein_id="HCA3359439.1"
                     /translation="MRKSLLAILAVSSLVFGSAVFAADLEDNMDILNDNLKVVEKTDS
                     APELKAALTKMRAAALDAQKATPPKLEDKAPDSPEMKDFRHGFDILVGQIDGALKLAN
                     EGNVKEAKAAAEALKTTRNTYHKKYR"
     gene            3281..3619
                     /locus_tag="MOX77_004042"
     CDS             3281..3619
                     /locus_tag="MOX77_004042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine dehydrogenase"
                     /protein_id="HCA3359440.1"
                     /translation="MRRVDNGAVKHDAGERINELAEQVLTQVDGLLGRHHIVPNAVQT
                     QMLTSHVRAMAHRSITGEPLPEVDASLFDEISAESMALAREIVAAFGNLPDEEAWLLS
                     VHFEVAKDNL"
     gene            3630..3992
                     /locus_tag="MOX77_004043"
     CDS             3630..3992
                     /locus_tag="MOX77_004043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3359441.1"
                     /translation="MEQITVVIGDRLGKGQKVAAGVEKAGGRAVVVPGVAADMKLGDV
                     MKAENATFGISFCGSGGAGAITAQNKHGYKAKYGMRSVDEGVTAINEGCNVLGFGFMD
                     KEELGERLVQAWQKKYGA"
     gene            3992..4294
                     /locus_tag="MOX77_004044"
     CDS             3992..4294
                     /locus_tag="MOX77_004044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4312 family protein"
                     /protein_id="HCA3359442.1"
                     /translation="MMKEQFTTTVRVKGKGDAKARAFADALNHVQSAVMRESPYILLR
                     IEPQDVRIVQAHESVRKEAFLFFFLRRERRTYSVELDVAVNVTAINLDRVDFVAKR"
     gene            4317..5093
                     /locus_tag="MOX77_004045"
     CDS             4317..5093
                     /locus_tag="MOX77_004045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4311 domain-containing protein"
                     /protein_id="HCA3359443.1"
                     /translation="MFLIILIKSLIIGALVGVGVGAGAARMFHAPTTQGMGAFRTLGE
                     LNSCEGDPASHFSFGLGFFFNAWASSVAAGSFTQDVDHRIIPNWGAAALMIKNRNVGE
                     TLHDPKKMAIACAVIGMIVVTFLNLTASSVPEALQVTAVKVLVPAANLLVNIVMPVIF
                     WLAAIDAGKKSGFWATVFGGAAQLIMGNAVPGLVLGILIGKGVEESGWNHVTKVMMVA
                     IVLLFVLSGFFRGFDMKMIESFNMTVPNWLELIHNSLSGK"
     gene            5105..5749
                     /locus_tag="MOX77_004046"
     CDS             5105..5749
                     /locus_tag="MOX77_004046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4310 family protein"
                     /protein_id="HCA3359444.1"
                     /translation="MEENKGFWYADWSFPIFVGLLSSGVFAGTHMYYLYGIGAFNEVA
                     FVAMLKAGMDTGVYGAVAAFGASFLFARIIEGSLVGILDIGGAIQTGVGLGVPALLLG
                     AGFVFPVANFIASLITGLVIGLAIGYIIILARKFTINQSDSTYGADVMMGAGNTSGRF
                     LGPLIILSAMTASIPIGLGSLVGALLFYIWQKPITGGAILGAMILGSIFPVSIS"
     gene            5808..>6477
                     /locus_tag="MOX77_004047"
     CDS             5808..>6477
                     /locus_tag="MOX77_004047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase/deacetylase family
                     metallohydrolase"
                     /protein_id="HCA3359445.1"
                     /translation="MFDLLLRHARLVDDTLTNIALQDGKIAALGDVDGPALKTIDLRG
                     ECYVSAGWIDSHVHCYPKSPIYHDEPDSVGIATGVTTVVDAGSTGADDIDDFYTLTRD
                     AATEVYALLNVSRVGLIAQNELANMANIDADAVRQAVKRHPDFIVGLKARMSSSVVGV
                     NGITPLERAKAMQQENGNLPLMVHIGNNPPDLDEIAERLTAGDIITHCYNGKPNRILR
                     PDGEL"
BASE COUNT         1437 a         1633 c         1893 g         1514 t
ORIGIN      
        1 cgaacggcgt gacggtgtat gacgattttg ctcaccatcc tacggcaatt ctggccacgc
       61 tggcggcgct gcgcggtaaa gtgggcggca ccgcgcgcat tatcgcggta ctggagccgc
      121 gttctaacac gatgaagatg gggttatgca aggatgacct ggcgccgtcg ttagggcgtg
      181 cggatgaagt gttcctgctg cagccgccgc atattccgtg gcaggtttca gaagtggcgg
      241 acgcctgcgt acagcctgct cactggagtg gagatgtcga tacgctggcg gatatggtgg
      301 tgaaaaccgc acagcctggc gatcacatcc tggtgatgag caacggcggt ttcggcggca
      361 tccatcagaa attgctggat gggctggcga aaaaagcact ggttgtgggg taaaaaatgc
      421 ccggtggcgc tgcgcttacc gggcctacaa tacgtacatt cccgtaggcc ggataaggcg
      481 ttagcgccgc catccggcag acgctatcaa catgtaaaat tacccttcgt tttccgccag
      541 ctcgcgcaga tactggaaga tctgacgcgc tgatttcggc ggtttgttgc cttctttctc
      601 tttcttcgca ttgcggatca atgaacgaag ctgttgacga tcggcgtgcg gccacagggt
      661 cagtacttcg gctaccgcgt catcgccttc gacgatcaga cgatcgcgca gatgctcaag
      721 cttgtgaaac agcaccacct gctgattatg gcggttcttc agcttgtcca gcgcctggcg
      781 aataggttca acgtcgcgtt ggcgcagcat ttttccgata agctgcaact ggcggcggcg
      841 tccttccatt ttgattcgct gggccagttc aatggcgtcg cgcagatcgg cgtccagcgg
      901 gatcttatcc agcgcgtttt tccccagatc caccagttcc gcgcccaggc gttttaattc
      961 ctcggcatcg cgtttaattt cacttttact gacccagata atttcatcgt cttcgtcttc
     1021 gatgtcatca ccgggaacgt cgtcgagcca gtcttcgggc tgctttgtca tgtcaggctc
     1081 cttaaaaaaa gaggctaatg ttaccagtta agatgcgcac tgaaaaacgg ttctctgtta
     1141 gacttcagag aaactctctc tacattatgg catttgcaat gaaagtaatc tcacaagttg
     1201 aagcgcagcg taagattctg gaagaagcag tttcgacagc gctggagtta gcctcaggca
     1261 aatcggatgg ggcggaagtc gccgtcagca agactaccgg cattagcgtc agcacccgtt
     1321 atggtgaagt agagaatgtc gaatttaata gcgacggcgc gctgggaatt acggtgtatc
     1381 accagaaccg caaaggcagc gcctcttcga cggatttaag cccgcaggcg attgcccgta
     1441 ccgtgcaggc cgcgctggat atcgcgcgtt acacgtcgcc ggacccgtgc gcaggcgtgg
     1501 cggacaaaga actgctggcg tttgatgcgc cggatctgga tttgttccac ccggcagagg
     1561 ttacgccaga cgaagccatt gaactggccg cgcgtgcgga acaggcttct ctaaaggcgg
     1621 ataaacgcat caccaatacc gaaggcggta gctttaacag ccattacggc attaaagtgt
     1681 tcggcaacag ccacggtatg ttgcagggat attgctccac gcgccattcg ctctcaagct
     1741 gcgtcatcgc cgaagagaac ggcgatatgg agcgtgatta cgcttacacc atcggccggg
     1801 caatggcgga tctgcaagcg ccggaatggg tcggggccga gtgcgcgcgc cgtaccttat
     1861 cccgcctgtc gccgcgcaag ctctccacca tgaaagcgcc ggtcattttc gccaatgaag
     1921 tggcgacagg gctatttggt catctggtcg gggcgattgc cggcggcgcg gtataccgta
     1981 aatccacttt tctgctcgac tcgctgggca aacaaattct gccggaatgg ttaaccatcg
     2041 aagaacaccc gcatctgcta aaagggctgg cgtcttcacc gttcgacagc gaaggcgtgc
     2101 gtacggagcg ccgggacatt gtgaaggatg gcgtactgac gcaatggttg ctgaccaact
     2161 attccgcccg caaactgggg ctgaaaagta ccggtcatgc tggcggcatt cataactggc
     2221 gtatcgccgg gcaggggctg aactttgagc agttactgaa agagatgggt accggcctgg
     2281 tggtgacgga actgatgggc cagggcgtca gcggtattac cggcgactac tcccgcggcg
     2341 ctgcgggatt ctgggttgaa aatggtgaaa tccagtaccc ggtaagtgaa attaccattg
     2401 ccggtaattt aaaagagatg tggcgtaata ttgtcaccgt aggcgatgat attgaaacgc
     2461 gcagtaatat acaatgtggt tcggtattgt taccggagat gaaaatcgcc ggacaataat
     2521 acccgtcata cttcaggctg caggcgcgtt ggctgcctgc aactcgaatt attcagggta
     2581 ttacacttat cgttaataat aaaaaggaag tgagcaatgc gtaaaagcct gttagctatt
     2641 cttgctgtgt catcgctggt attcggttcg gctgtttttg ctgccgatct tgaagataat
     2701 atggatattc tcaatgataa cctgaaagtt gttgagaaaa cggatagtgc ccctgagctg
     2761 aaagcggcat taactaaaat gcgcgcggcc gcgctggatg ctcaaaaagc tacgccgcca
     2821 aagctggaag ataaagcgcc ggatagcccg gaaatgaagg attttcgtca cggttttgac
     2881 attctggtcg gccaaattga tggcgcgctg aagctggcga acgaaggtaa cgttaaagaa
     2941 gcgaaagcgg cggcggaagc gctaaaaacc acccgcaata cgtatcataa gaagtatcgt
     3001 taatttttgt gggatggcgg cttcgcttta tccgcaggtc gccatccggc aaaatgtaat
     3061 acccatcaca ctttctcact ttatacgaca acgtcattgt ttcgccattt cctctttatg
     3121 ccgcgataga tctcacactt tcccggcgat aattcatcaa tgccgctttt tctgtggcgc
     3181 agatcaccta tcccactcgc gtttccactt cgaggtggaa aataactcgc tacaaacttt
     3241 taacccttac cgctagtttt atctcattgc cattaatggg gtgagacgcg tggataacgg
     3301 agcagtaaaa cacgatgccg gtgagcgaat taacgaactg gctgaacagg tgttaacgca
     3361 ggtggatggc ctgctggggc gacatcacat tgtccccaat gcggtacaga cgcaaatgct
     3421 gacctcgcac gttcgcgcga tggcgcaccg gtcaattacc ggcgagcctt taccggaagt
     3481 cgatgccagc ttgtttgatg aaatctcagc cgaatcaatg gcgctcgccc gcgaaatcgt
     3541 ggcggcgttt ggcaaccttc ctgacgaaga agcctggcta ttatcggtac attttgaagt
     3601 cgcgaaagac aacctctaag gagcaaaaaa tggaacagat taccgtcgta attggcgatc
     3661 gcctgggtaa aggccagaaa gtggcggcag gcgtggaaaa agcgggcggt cgcgcggtcg
     3721 tcgtaccggg cgtcgcggca gacatgaagc tgggcgatgt gatgaaagcg gaaaacgcca
     3781 ccttcggcat ttcattttgc ggcagcggcg gcgcgggcgc tatcaccgcg caaaacaagc
     3841 atggctacaa agccaaatat gggatgcggt cagtagatga aggagtcacc gctatcaatg
     3901 agggctgcaa cgtgttgggt ttcggcttta tggataaaga agagctcggc gagcgcctgg
     3961 tgcaggcgtg gcaaaagaaa tacggcgcct gatgatgaaa gagcaattca ccaccacggt
     4021 gagagtaaaa ggcaagggcg acgccaaagc acgcgccttt gccgatgcgc tgaaccatgt
     4081 tcagtcggcg gtgatgagag agtcgccgta tatcttactg cgtattgagc cacaggatgt
     4141 gcggattgtt caggcgcatg agtcggtgcg taaagaggcc tttctgtttt tctttttgcg
     4201 ccgggaacga cgcacttaca gcgtggagct ggatgtggcc gtcaacgtga ccgccatcaa
     4261 tctcgacagg gtggatttcg tcgcgaaacg ctgattttta ttaaaaaggc atagttatgt
     4321 tcctgataat actaattaaa tctctcatta tcggcgcgct ggtcggcgta ggggtgggcg
     4381 ctggggctgc acgtatgttt cacgcgccaa ccacgcaggg gatgggcgcg ttccgtacgt
     4441 tgggcgaact caactcttgt gaaggcgacc cggcatctca cttctccttt ggactgggtt
     4501 tcttctttaa cgcctgggcg tcgtctgtgg cggccggatc gttcacccag gatgtcgatc
     4561 accgcatcat ccctaactgg ggcgcggcgg cgctaatgat caaaaaccgt aacgtcggcg
     4621 agacgctgca cgacccgaaa aaaatggcga tcgcctgcgc cgtcatcggc atgatcgtcg
     4681 tgacgttcct taacctgacc gcctcatccg tgccagaagc gctacaggtg acggcggtta
     4741 aggtgctggt accggcggca aacctgctgg tcaacatcgt catgcctgtg attttctggt
     4801 tagcggcgat cgacgctggt aaaaaatcgg gtttctgggc caccgttttc ggcggcgcgg
     4861 cgcagctcat catggggaac gccgtaccgg ggctggtgct gggtattttg atcggcaaag
     4921 gcgtagaaga gagcggctgg aaccatgtca ccaaagtgat gatggttgcc atcgttttgc
     4981 tgtttgtgtt gagcggtttc ttccgcggct tcgacatgaa aatgatcgag tctttcaaca
     5041 tgacggtacc gaactggctt gaactgatcc acaactcgct cagcggcaaa taacggagac
     5101 cacaatggaa gagaataaag gtttttggta tgccgactgg tcgttcccga tctttgttgg
     5161 cctgctctcc tccggcgttt tcgccgggac gcatatgtac tatctgtacg gtatcggcgc
     5221 atttaacgaa gtcgcttttg tggcgatgtt gaaagcgggg atggataccg gcgtctacgg
     5281 cgcggtcgcc gctttcggcg ccagcttttt atttgcccgc attatcgaag gttcgctggt
     5341 cgggattctg gatatcggcg gggcaattca gactggcgtg ggcttagggg ttccggcgtt
     5401 actgctgggg gctggctttg tcttcccggt ggcgaacttt atcgcttcgc tgataaccgg
     5461 tctggtgatt ggcctggcga ttggctacat cattattctg gcgcgtaagt tcactattaa
     5521 tcagagcgac tccacgtacg gggcggacgt catgatgggg gccggtaaca cttcaggccg
     5581 ttttctgggg ccgttgatta tcctcagcgc catgacggca tcgattccta ttggtctggg
     5641 ctctctggtg ggcgcgctgc tgttttatat ctggcagaag ccgattaccg gcggcgcgat
     5701 tttaggcgcg atgatcctcg gttccatctt cccggtttcg attagctaac tgttgatttg
     5761 taggtcggat aaggcggttg cgccgccatc cggcaaagga gagaacgatg tttgatttac
     5821 tcctgcgcca tgcgcgtctg gtcgatgaca cgctgactaa tattgccctt caggatggca
     5881 aaatcgcggc gttgggtgac gttgatggtc cggcgctgaa aaccattgac ctgcgcggcg
     5941 aatgttacgt tagcgcgggt tggattgatt ctcacgttca ctgctacccg aaatcgccga
     6001 tttaccacga cgaaccggac agcgtgggta ttgccactgg cgttaccaca gtggtggatg
     6061 caggcagcac aggcgctgat gatattgacg atttttacac gctgactcgt gacgcggcca
     6121 ccgaggttta tgcgctgctg aatgtttcac gcgttgggct tattgcccaa aacgagctgg
     6181 ctaacatggc caatattgac gctgatgcgg ttcggcaggc ggtaaaacgc catccggatt
     6241 ttatcgtcgg cctcaaggcg cggatgagca gcagcgtggt aggcgttaac ggcatcacgc
     6301 cgctggaacg cgctaaagcc atgcagcaag aaaacggcaa cctgccgctg atggtacata
     6361 ttggcaataa cccgccggat ctggacgaaa tagcggagcg tctgacggcg ggcgatatca
     6421 ttacccactg ttacaacggt aagccgaacc gtattcttcg gcctgacggc gagctgc
//
LOCUS       DAGWFR010000199         6358 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.202, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000199 DAGWFR010000000
VERSION     DAGWFR010000199.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 6358)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6358)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6358
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.202"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..893
                     /gene="yejB"
                     /locus_tag="MOX77_004048"
     CDS             <1..893
                     /gene="yejB"
                     /locus_tag="MOX77_004048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="microcin C ABC transporter permease YejB"
                     /protein_id="HCA3359446.1"
                     /translation="NISDSHYRGGRGLDPEVIAEITHRYGFDKPLHERYFKMLRDYLS
                     FDFGDSLFRSASVLTLIKDSLPVSITLGLWSTLIIYLVSIPLGIRKAVHNGSRFDVWS
                     SAFIIIGYAIPAFLFAILLIVFFAGGSYYDIFPLRGLVSANFDTLPWYQKITDYLWHI
                     TLPVLATVIGGFAALTMLTKNSFLDEVRKQYVVTARAKGVSEKNILWKHVFRNAMLLV
                     IAGFPATFISMFFTGSLLIEVMFSLNGLGLLGYEATVSRDYPVMFGTLYIFTLIGLLL
                     NILSDISYTLVDPRIDFEGR"
     gene            893..1918
                     /locus_tag="MOX77_004049"
     CDS             893..1918
                     /locus_tag="MOX77_004049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCA3359447.1"
                     /translation="MPRLSPVNQARWARFRHNRRGYWSLWIFLVVFSLSLCAELIAND
                     KPLLVRYEGQWYFPLVKNYSERDFGGPLATTADYQDPWLQRQLENRGWVLWAPVRFGA
                     NTINFATTQPFPSPPSAKNWLGTDANGGDVFARILYGTRISILFGLMLTICSSVMGVL
                     AGALQGYYGGKVDLWGQRLIEVWSGMPTLFLIILLSSVVQPNFWWLLAITVLFGWMSL
                     VGVVRAEFLRTRNFDYIRAAQALGVSDRDIILRHMLPNAMVATLTFLPFILCSSITTL
                     TSLDFLGFGLPLGSPSLGELLLQGKNNLQAPWLGIAAFLSVAILLSLLIFIGEAVRDA
                     FDPAKAV"
     gene            1920..3509
                     /gene="yejF"
                     /locus_tag="MOX77_004050"
     CDS             1920..3509
                     /gene="yejF"
                     /locus_tag="MOX77_004050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="microcin C ABC transporter ATP-binding protein
                     YejF"
                     /protein_id="HCA3359448.1"
                     /translation="MTSPLLAIENLSVGFRQQQHVRPVVNAISLQVNAGETLALVGES
                     GSGKSVTALSILRLLPTPPAVYLSGDIRFHGESLLHASEQTLRGVRGNKIAMIFQEPM
                     VSLNPLHTLEKQLYEVLSLHRGMRREAARAEMIGCLDRVGIRQASQRLRDYPHQLSGG
                     ERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILSLLRELQRELNMGLLFITHNLS
                     IVKKLADSVAVMQHGKCVENQRADTLLSAPTHPYTQKLLNSEPTGDPVPLPAGQAPLL
                     EVDKLRVAFPIRKGILKRVVDHNVVVNNISFTLHPGETLGLVGESGSGKSTTGLALLR
                     LIRSEGRIVFDGQSLDTLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVH
                     QPTLSGAQREQQVKAVMMEVGLDPETRHRYPAEFSGGQRQRIAVARALILKPSLIILD
                     EPTSSLDKTVQAQILALLKSLQQKHRLAYIFISHDLHVVRALCHQVIVLRQGEVVEQG
                     QCERVFTAPQQAYTRQLLALS"
     gene            complement(3513..3857)
                     /locus_tag="MOX77_004051"
     CDS             complement(3513..3857)
                     /locus_tag="MOX77_004051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3359449.1"
                     /translation="MNTLQLSIVHRLPQNYRWSAGFAGSKVEPIPQNGQSTENSLVAL
                     KLLSPAGDSAWSVMHKLSQALSDIEVPCSVLECEGEPCLFVNRQDEFAATCRLKNFGV
                     AIAEPFSNNNPF"
     gene            complement(4248..5438)
                     /locus_tag="MOX77_004052"
     CDS             complement(4248..5438)
                     /locus_tag="MOX77_004052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bcr/CflA family multidrug efflux MFS
                     transporter"
                     /protein_id="HCA3359450.1"
                     /translation="MTTRQHSSFAIVFILGLLAMLMPLSIDMYLPALPVISAQFGVPA
                     GSAQMTLSTYILGFALGQLIYGPMADSLGRKPVILGGTLVFAAAAVACALAQTIDQLI
                     VMRFFHGLVAAAASVVINALMRDIYPKEEFSRMMSFVMLVTTIAPLMAPIVGGWVLVW
                     LSWHYIFWILAIAAILASVMIFALIKETLPVERRQPFHIRTTIGNFAALFRHKRVLSY
                     MLASGFSFAGMFSFLSAGPFVYIEINHVPPQDFGYYFALNIVFLFVMTIINSRFVRRV
                     GALNMFRAGLWIQFAMAVWMVFSALMGIGFWALVVGVAAFVGCVSMVSSNAMAVILDE
                     FPHMAGTASSLAGTFRFGIGAIVGALLSLATFNSAWPMIWSIALCAACSILFYLYASR
                     PKKR"
     gene            complement(5466..6161)
                     /gene="rsuA"
                     /locus_tag="MOX77_004053"
     CDS             complement(5466..6161)
                     /gene="rsuA"
                     /locus_tag="MOX77_004053"
                     /EC_number="5.4.99.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA pseudouridine(516) synthase RsuA"
                     /protein_id="HCA3359451.1"
                     /translation="MRLDKFIAQQLGVSRAIAGREIRGNRVTVDGDIIKNAAFKLLPE
                     HAVAYDGNPLAQQHGPRYFMLNKPQGYVCSTDDPDHPTVLYFLDEPVAYKLHAAGRLD
                     IDTTGLVLMTDDGQWSHRITSPRHHCEKTYLVTLESPVADDTAAQFAKGVQLHNEKDL
                     TKPATLEVITPVQVRLTISEGRYHQVKRMFAAVGNRVVELHRERIGAITLDENLAPGE
                     YRPLTEEEIASVG"
BASE COUNT         1488 a         1786 c         1612 g         1472 t
ORIGIN      
        1 gcaatatcag cgacagccat tatcgcggcg gccggggact cgatccggag gtgatcgcgg
       61 agatcaccca tcgctacggc ttcgacaaac cgctgcatga gcgttatttc aagatgctac
      121 gggactatct ctcttttgac ttcggcgaca gtctgtttcg cagcgcatcc gtactaacgc
      181 tgatcaaaga tagccttccc gtctccatta ccctgggatt atggagcacg ctgattattt
      241 atctggtgtc tatcccgctg gggattcgca aagccgtcca taacggcagt cgctttgatg
      301 tgtggagcag cgcgtttatc attattggtt atgcgatccc cgcctttctg ttcgctattt
      361 tattaatcgt cttttttgcc ggcggcagct actacgatat ctttccgcta cgtggcctgg
      421 tctccgccaa ctttgacacg ttaccgtggt accagaaaat caccgattat ttgtggcata
      481 ttacgctgcc ggtgttggcg accgtcatcg gcggttttgc cgccctgacg atgctgacga
      541 aaaattcgtt tctcgacgag gtgcgtaaac agtatgtcgt taccgctcgc gctaaaggcg
      601 tgagtgaaaa aaacattctc tggaaacatg tttttcgtaa cgccatgctg ctggtgatcg
      661 ccgggtttcc cgccactttt atcagtatgt ttttcaccgg ctcgttgcta attgaagtca
      721 tgttctcgct caacggcctg gggctgctgg gttatgaagc aaccgtttcg cgcgactatc
      781 cggtgatgtt cggcacgctt tatatcttta ccctgattgg cttattactg aatatcctga
      841 gcgatatcag ctatacgctg gtcgatccac gcattgattt tgagggacga taatgccgcg
      901 attaagcccg gtcaatcagg cccgctgggc gcgtttccgc cataatcgcc ggggctactg
      961 gtcactatgg attttcctgg tagtgttcag cctgagctta tgcgcggaac tgattgctaa
     1021 cgataagcca ttgctggtgc gctatgaagg ccagtggtat tttccgctgg taaaaaatta
     1081 cagcgagcgc gatttcggcg gcccgctggc gacaacggca gactatcagg acccctggct
     1141 acaacggcag cttgagaatc ggggctgggt gttgtgggcc cccgtacgct ttggcgccaa
     1201 taccattaat tttgccacca cgcagccttt cccctccccg ccttcggcga aaaactggct
     1261 gggcaccgat gcgaatggcg gcgacgtttt cgcccgcatc ctgtacggca cccgcatttc
     1321 tattttattt ggcctgatgt taacgatttg ctccagcgtc atgggtgtac tggcgggcgc
     1381 gctacagggc tattatggcg gcaaagtcga tttatggggg caacgtctca tcgaagtctg
     1441 gtcggggatg ccgaccctgt ttctgattat tttactttcc agcgtagtgc agcctaactt
     1501 ctggtggctg ctggccataa ccgtgctgtt tggctggatg agtctggtgg gcgtggtgcg
     1561 cgccgagttt ttacggaccc gcaattttga ctatatccgc gccgcgcagg cgcttggcgt
     1621 cagcgatcgt gacattatcc tgcgccatat gttgcctaat gcgatggtcg ctaccctgac
     1681 atttttaccg ttcattttat gtagttccat caccaccctg acgtcgctgg attttctggg
     1741 attcggtctg ccgcttggct ccccttctct cggcgaactt cttttacagg ggaaaaacaa
     1801 cttacaggct ccctggctgg ggatcgccgc ctttctgtct gtcgccattc tgctatcgct
     1861 gctgattttt atcggcgaag cggtacgcga cgcctttgat cctgctaagg cggtataaga
     1921 tgacatctcc attgcttgcg attgaaaatt tatcggtagg tttccgtcag caacagcacg
     1981 tgcgccctgt cgttaacgcc atttcgttac aggtgaacgc cggggaaacg ctggcgctgg
     2041 tcggcgagtc agggtcagga aaaagcgtga cggcgctttc cattctgcgt cttttgccta
     2101 cccctcccgc cgtctacctc tccggcgata ttcgctttca cggcgaatca ttgcttcatg
     2161 ccagcgagca gacgctacgc ggcgtacgcg gcaataaaat cgccatgatt tttcaggaac
     2221 cgatggtttc acttaaccca ctgcatacgc tggaaaaaca gctctatgaa gtgctgtcgc
     2281 tccatcgggg aatgcgtcgg gaggcggcaa gggcggagat gatcggttgt ctggatcggg
     2341 tcggtatccg ccaggcgagc cagcgtctgc gcgattatcc gcatcagctt tccggcggcg
     2401 aacgccagcg cgtcatgata gccatggcgc tgttaacacg gccggaatta ctgatcgccg
     2461 atgagccgac caccgccctc gacgtctccg tacaggcgca gatcttatct ctactgcggg
     2521 aactccagcg tgagctcaat atgggattgc tgtttatcac ccataacctc agcattgtaa
     2581 aaaaactggc ggattcagtg gcggtaatgc aacacggcaa gtgcgtagag aaccaacgcg
     2641 ccgacacgct gctctccgcg ccgacccatc cgtacacgca aaaactactc aacagcgaac
     2701 ccactggcga tccggttccg ctccccgccg ggcaggcgcc gttgctggaa gtggacaagc
     2761 tgcgcgtcgc cttcccaatc cgcaaaggca ttctgaagcg cgtcgtggat cataatgtgg
     2821 tggttaacaa tatcagtttc accctgcatc caggcgaaac gctgggtctg gtcggcgagt
     2881 caggatcggg aaaaagcacc accggtctgg cgctgttacg gcttatccgc tccgaaggcc
     2941 gcatcgtgtt tgacggtcaa tcgctggata cgttaaaccg ccgccagctt ttacctgttc
     3001 gccaccgtat ccaggtcgta ttccaggacc cgaactcatc gctaaacccg cgtttaaacg
     3061 tattgcaaat tatcgaagaa ggcctgcgcg tccaccagcc tacgctttca ggcgcgcagc
     3121 gcgaacagca ggtgaaagcg gtcatgatgg aagtcggcct ggacccggaa acgcggcatc
     3181 gttaccccgc tgagttttcc ggcggccagc gtcaacgtat cgccgtcgcc agggcgctga
     3241 ttttaaaacc gtcgcttatt attctggatg aaccgacctc atcgctggat aaaaccgttc
     3301 aggcgcagat tcttgccctc ctgaaatcgc tccagcaaaa gcaccgtctg gcctatatct
     3361 tcattagcca cgatctgcat gtagtacgcg cgctgtgcca tcaggttatc gtgctgcgac
     3421 agggggaggt ggttgaacag gggcaatgcg agcgcgtgtt taccgcaccg caacaagcgt
     3481 atacgcgtca gctactcgcg ttaagctgac gcctaaaaag gattattgtt agaaaaaggt
     3541 tccgctatcg ccacgccgaa atttttcagc cgacaggtgg cggcaaactc atcctgacga
     3601 ttaacgaaca ggcacggttc cccttcgcac tccagcacgg agcaaggaac ttcaatatcg
     3661 cttagcgcct ggctgagctt atgcatcact gaccacgcgc tatcgcctgc cggactcaac
     3721 agtttaagcg ccaccagact attctcggtg ctctgcccgt tttgcggaat cggttcaacc
     3781 tttgaccccg caaaacccgc cgaccagcga tagttttgcg gcagacggtg aacaattgag
     3841 agctgtaatg tattcacttt ctttccccgg aagcacaatt atttcacaat ttacttacat
     3901 ttatattaac acatcattga caacccgtcc ttaaacagat tgctaacgcc cttctctccg
     3961 tcagtggctc tacagcaagc gggagttaaa atagttttac cgacgcggag atagcggcgg
     4021 gctatatgta cccgtttctg cgatctaact caaccttttt aactacaatg atgtgacttt
     4081 ttacataaat ggattttaca taaaataaac ataaaggagg aaaatgatga attggtaatt
     4141 gatatacatc aactatgaaa gccgtttggc tttgccatcg tgtagcggat agcgcccccc
     4201 aacgccgcct gcgcattctt cggcgccatt gagggacacc gcgcccgtca ccgttttttg
     4261 ggacggctgg cgtagagata aaacagaatg gaacaggcgg cgcaaagcgc aatcgaccag
     4321 atcatcggcc acgcactgtt aaaggtagcc agcgacagca acgcgccgac gatagcgcca
     4381 ataccaaagc ggaaagtgcc cgccaacgaa gacgccgttc cggccatatg cggaaactca
     4441 tccaaaatga ccgccatcgc attggacgaa accatcgaca cacagccgac aaacgccgca
     4501 acgccaacca ccagcgccca gaatccaatg cccatcagcg cgctgaaaac catccacacc
     4561 gccatcgcaa actgaatcca tagcccggcc cgaaacatgt ttagcgcccc tacccgtctg
     4621 acaaaacggc tgttgataat cgtcatcaca aacagaaata cgatgttcaa cgcgaagtag
     4681 tagccgaaat cctgcggcgg aacatgatta atttcgatat agacaaacgg ccccgcgctc
     4741 aaaaaagaga acataccggc aaaactgaac ccgctcgcca gcatatagct cagtacgcgt
     4801 ttgtggcgaa acaacgcggc aaagttacct attgtggtac gaatatgaaa aggctgacgc
     4861 cgctcaacgg gcagcgtctc tttaatcaaa gcaaagatca tgactgacgc cagaatcgcc
     4921 gcaatagcca gtatccagaa gatatagtgc cagcttaacc ataccaacac ccagccgcca
     4981 acaatgggcg ccattaacgg cgctatcgta gtgaccagca tgacaaatga catcatgcgc
     5041 gaaaactctt cctttggata aatatcccgc atcagcgcat tgatgacgac gcttgccgcc
     5101 gcagccacca aaccgtgaaa gaaacgcatc acgatcagtt gatcgatagt ctgcgccaac
     5161 gcacaggcga ccgccgcagc ggcaaatacc agcgtcccgc ccaggatgac cggcttacgc
     5221 ccgaggctat ccgccatcgg tccatagata agctgaccca gcgcaaaccc cagaatatag
     5281 gtgctgagcg tcatctgcgc gctaccggca ggcacgccga attgcgcaga aatcaccggc
     5341 agcgctggaa gatacatatc aatcgacagc ggcattaaca tggccaacag gccaagaata
     5401 aagacaatgg caaaggaaga gtgctgccgg gtggtcacat cgaactcctg aatttaacga
     5461 gatagttagc cgacgctggc gatttcttct tcagtcaacg ggcggtactc gccgggagcc
     5521 agattctcat ccagcgtaat ggcgccaatc cgttcgcggt gcagttccac aacgcgattg
     5581 cctactgcgg caaacatccg cttcacctga tgataacggc cttcgctgat ggtcagacgg
     5641 acctgcacag gtgttatcac ctccagcgta gcgggtttag tgagatcttt ttcattatgc
     5701 aactgcacgc ctttcgcaaa ttgcgctgcc gtatcgtcgg ccaccggcga ctccagggtc
     5761 accagatagg ttttttcaca gtgatggcgc ggcgacgtaa tgcggtgcga ccactgaccg
     5821 tcatctgtca ttaacaccag accggtagta tcgatatcca gacgtcctgc ggcatgcagc
     5881 ttatacgcca ccggctcatc caggaaatac agcaccgttg gatgatcggg atcatcggtt
     5941 gaacaaacgt atccctgcgg cttgttaagc ataaaatagc gtggcccgtg ttgctgcgct
     6001 aagggattgc cgtcatacgc aaccgcatgt tccgggagca gtttgaaggc cgcattttta
     6061 atgatgtcgc catcgacggt aacgcggtta ccacgaattt cacgcccggc aatagcgcgg
     6121 ctgacgccaa gctgctgagc gataaattta tcaagtcgca tgtgtgtgat ttagcctgta
     6181 ataatacgga aatcgggcat tctacccgaa aaaagggaat tgctatccgc tcagtatagc
     6241 gggctaacta tatccctcaa gggaaatgat tcatggcata ctattcccgg aaccgtttaa
     6301 cgtagtgaga ccatgatttt tacactccgc ccctaccagc aagaagccgt agacgcca
//
LOCUS       DAGWFR010000200         6304 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.203, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000200 DAGWFR010000000
VERSION     DAGWFR010000200.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 6304)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6304)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6304
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.203"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..151
                     /locus_tag="MOX77_004054"
     CDS             <1..151
                     /locus_tag="MOX77_004054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DinI-like family protein"
                     /protein_id="HCA3359452.1"
                     /translation="FPENLGNVTVRYATANNLSVIGASKEDKERISEILQETWESADD
                     WFINE"
     gene            441..695
                     /gene="bssS"
                     /locus_tag="MOX77_004055"
     CDS             441..695
                     /gene="bssS"
                     /locus_tag="MOX77_004055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460132.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm formation regulator BssS"
                     /protein_id="HCA3359453.1"
                     /translation="MEKNNEVIQTHPLVGWDISTVDSYDALMLRLHYQTPNRPEPEGT
                     EVGQTLWLTTDVARQFISILEAGIAKIESGDYQENEYRHH"
     gene            808..1926
                     /gene="solA"
                     /locus_tag="MOX77_004056"
     CDS             808..1926
                     /gene="solA"
                     /locus_tag="MOX77_004056"
                     /EC_number="1.5.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-methyl-L-tryptophan oxidase"
                     /protein_id="HCA3359454.1"
                     /translation="MKYDLIIIGSGSVGAAAGYYATRAGLKVLMTDAHMPPYQQGSHH
                     GDTRLIRHAYGEGEKYVPLVLRAQTLWDELSTHNEEPIFVRSGVVNLGPADSAFLANV
                     ARSAQQWQLNVERLDATALMTRWPEIRVPDNYIGLFEADSGFLRSELAITTWLRLARE
                     AGCAQLFNSPVSHIHHDDNGVTIETSEGCYHASKALISAGTWVKTLVPELPVQPVRKV
                     FAWFKADGRYSTKNRFPAFTGEMPNGDHYYGFPAENDELKIGKHNGGQRIQAPEERKP
                     FAAVASDGAEAFPFLRNVLPGIGGCLHGAACTYDNSPDEDFIIDTLPGHENTLVITGL
                     SGHGFKFAPVLGEIAADFALGKTPSFDLTPFRLSRFSQ"
     gene            1967..2080
                     /locus_tag="MOX77_004057"
     CDS             1967..2080
                     /locus_tag="MOX77_004057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceO family protein"
                     /protein_id="HCA3359455.1"
                     /translation="MRRLFHFLMNNIREHFMLYVILWSLLAVMDIVYLLFF"
     gene            2343..2915
                     /locus_tag="MOX77_004058"
                     /pseudo
     CDS             2343..2915
                     /locus_tag="MOX77_004058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460129.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b"
     gene            2912..3487
                     /locus_tag="MOX77_004059"
     CDS             2912..3487
                     /locus_tag="MOX77_004059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HCA3359456.1"
                     /translation="MKKNLLGFTLASLLFTTGSAVAAEYKIDKEGQHAFVNFRIQHLG
                     YSWLYGTFKDFDGTFTFDEKNPSADKVNVTINTNSVDTNHAERDKHLRSAEFLNVAKF
                     PQATFTSTSVKKEGDELDITGNLTLNGVTKPVTLEAKLMGQGDDPWGGKRAGFEAEGK
                     IKLKDFNITTDLGPASQEVELIISVEGVQQK"
     gene            complement(3539..4591)
                     /locus_tag="MOX77_004060"
     CDS             complement(3539..4591)
                     /locus_tag="MOX77_004060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-related sulfurtransferase"
                     /protein_id="HCA3359457.1"
                     /translation="MPVLHNRISNDELKAKMLAESEPRTTISFYKYFTIASPQQTRDA
                     LYQVFTALDVFGRVYLAHEGINAQISVPQSKVETFRQQLYTFDPALDGVRLNIALEDD
                     GKSFWVLRMKVRDRIVADGIDDPSFDASNVGDYLKAADVNAMLDDPDAVFIDMRNHYE
                     YEVGHFENALEIPADTFREQLPKAVEMLREHADKKIVMYCTGGIRCEKASAWMKHNGF
                     NKVWHIEGGIIEYARRAREQGLPVRFIGKNFVFDERMGERISDEVIAHCHQCGVSCDS
                     HTNCKNDGCHLLFIQCPQCASKFNGCCSEQCCEELALPEEEQRRRRAGRENGNKIFNK
                     SRGRLNSKLSIPDPAE"
     gene            4811..5731
                     /locus_tag="MOX77_004061"
     CDS             4811..5731
                     /locus_tag="MOX77_004061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LpxL/LpxP family Kdo(2)-lipid IV(A)
                     lauroyl/palmitoleoyl acyltransferasee"
                     /protein_id="HCA3359458.1"
                     /translation="MTKLPKFSVALLHPRYWLTWLGIGALWLVVQLPYPVIYKLGCAL
                     GHLARRVMKRRAKIAYRNLELCFPEMSAQERHTMVVKNFESVGMGVMETGMAWFWPDR
                     RVNRWMEASGLEHIREVKAQGLGFILVGIHFLTLEFGARMFGMHNPGIGVYRPNDNPL
                     LDWLQTWGRLRSNKSMLDRKDLKGMVKALKSGELIWYAPDHDYGPRASVFVPLFAVDQ
                     AATTSGTWMLARMSKACIIPSVPRRKPDGKGYELIILPAEYSPPLESAEATAAWMNKI
                     VEQCIMMAPEQYMWLHRRFKTRPEGVPSRY"
     gene            5886..>6304
                     /locus_tag="MOX77_004062"
     CDS             5886..>6304
                     /locus_tag="MOX77_004062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3359459.1"
                     /translation="MSPSDVPINWKRNLTVTWLGCFLTGAAFSLVMPFLPLYVEQLGV
                     TGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIILLRSALGMAIVMLLMGMA
                     QNIWQFLILRALLGLLGGFIPNANALIATQVPRHKSG"
BASE COUNT         1529 a         1629 c         1548 g         1598 t
ORIGIN      
        1 ttttcctgag aatttgggta acgtcaccgt gcgttacgct accgccaaca acttgtccgt
       61 cattggcgcg tcaaaagagg ataaagaacg cattagcgag attctccagg agacctggga
      121 gagcgctgat gactggttca tcaatgaata aaaaatgata tgcagtgatg tatgtttgcc
      181 gggtcgcccc ggctttttta tttgcgcaac tgatgaatat ttcgcctgac cgtcaaaata
      241 attgcacaac atcctaaaaa aatatgaatg aactgccgct ttattgttca tataattctt
      301 aaaaagagaa atttatcctc cggtctcttt aaaaacgcag tgaatagcct tattaattgg
      361 tatactgaag ttgcttcaga agaaaaacac gcattgaacc tcgagaaccg ttgtcttata
      421 acacgtacca ggggggcatg atggaaaaga ataatgaagt cattcagacc catccgcttg
      481 taggatggga catcagcacc gtcgatagct atgatgcgct gatgctgcgt ttacactacc
      541 agaccccaaa tcgtccggaa ccggaaggga ctgaagttgg tcaaacgctc tggttaacga
      601 cagatgtagc caggcaattt atttcaatat tagaagccgg catcgccaaa atagaatcag
      661 gcgattacca ggaaaacgag tatcgtcacc attagcgtga cgcgctcccc ctctctcagg
      721 caccgtaagg tgcctcactt atttctggct tgtatatctc agcgcagtta tttaccttga
      781 aatcatcgcg atagcagaga gaagctgatg aaatacgacc ttattattat cggcagcggt
      841 tcggttggcg ccgccgctgg ttattacgcc acccgcgccg ggctaaaggt cctgatgacc
      901 gatgcgcata tgccgcctta tcaacagggc agccaccacg gcgatacccg tcttatccgc
      961 cacgcttatg gtgaaggcga aaaatatgtc ccgctggtgc ttcgcgccca gacgctttgg
     1021 gatgagctct ccacacacaa tgaagagcct atttttgtcc gctccggcgt cgtcaacctc
     1081 ggcccggccg attccgcttt cttagccaac gtcgcacgaa gcgcgcaaca gtggcaattg
     1141 aacgtcgagc gcctggacgc gacggccctc atgacgcgct ggccggaaat tcgcgtgccc
     1201 gataattata tcgggctgtt tgaagctgac tccggtttcc tgcgcagcga attagccatt
     1261 accacatggc ttcgtctggc ccgagaggca ggctgcgcac agctattcaa cagcccggta
     1321 agccatattc accatgatga taacggtgtg acgatagaga cgagtgaagg ctgctaccac
     1381 gccagcaaag cgctgattag cgcgggcacc tgggtcaaaa cgctggtacc ggagctgccc
     1441 gttcagcccg tacgtaaagt ttttgcctgg tttaaggcgg atggacgtta cagcactaaa
     1501 aaccgctttc cggcctttac cggcgaaatg cccaacggcg atcactatta cggtttcccg
     1561 gcggagaacg acgagttaaa aatcggcaaa cacaatggcg ggcagcgaat acaggcaccg
     1621 gaagagcgca agccctttgc cgccgttgcc agcgatggcg cggaagcatt tcctttcctg
     1681 cgtaacgtac tgccgggtat cggcggttgt ttacatgggg cggcatgtac ctatgataat
     1741 tcgccggacg aggattttat tatcgatacg ctgcctggcc atgagaatac gcttgtcatc
     1801 actggactca gcggacatgg ttttaaattc gccccggtgt taggagaaat cgctgcggat
     1861 tttgcgttgg gaaaaacgcc ctcctttgat ctgacgccgt tccggctttc ccgttttagc
     1921 caataatttg tcggccccgt aaaggggctg tttattaagg taagctatgc gtcgtctctt
     1981 tcattttctg atgaataata ttcgcgaaca tttcatgctt tacgttattc tttggtcgct
     2041 gctggcggtg atggatattg tttatctcct tttcttctga ttgcttttca ttgacgttaa
     2101 ctaacacttc ctgaaagttc ctcacttttt atttcataat gttgaagcac ggcaataatg
     2161 ccaactcctg ccgttgtgcg gttacaggag tgaaatatct cgaaacttct gaagctgaat
     2221 cgcaaacaac atcaaaatta ttgaaataaa aataaatatc attcaaattc ttatttataa
     2281 gttgcattcg gcgcttttcc acgccatttt cattctctcg tgaaatattc attggtgtgt
     2341 ttatgcaatt taaaaatact ccacaacgtt atggcgtagt ttccgccgcc ctccactggc
     2401 tgaccgccct agtggtctat ggcatgtttg cgttgggttt atggatggtc acgctcagtt
     2461 attacgacgg ctggtatcac taggcgccgg aaatacataa aagtattggc atgttactga
     2521 tgatggcgct gatcgtgcgt attatctggc ggctttattc tccgccgccc gttgcgttga
     2581 ccagctattc ccgtttaacg cgcattggcg ccgccgcggg tcatatcctt ctgtatctcc
     2641 tgctctttgc gataatcatt agcggctacc tgatttccac cgccgacggt aaaccgatta
     2701 gcgtctttgg ctggtttgag attccggcca cgcttacgga cgcgggcgcg caggctgaca
     2761 tcgccggaac actgcatctg tggtttgcct ggtcgctggt cattatctcg ctctcgcatg
     2821 gggttatggc gctaaaacac catttcatcg ataaagacga cacactgaaa cgtatgacag
     2881 gaatgtcgtc atctgactat ggagctcaaa aatgaaaaaa aacctgctgg gattcaccct
     2941 cgcatccttg ttattcacga ccggttccgc cgtggcggcg gagtataaaa ttgataaaga
     3001 aggccaacat gcgttcgtca atttccgcat ccagcatctg ggctacagct ggctatacgg
     3061 cacctttaaa gatttcgacg gcacgttcac ttttgacgaa aaaaatccgt cagcagacaa
     3121 agtgaatgtg accattaaca ccaatagcgt cgacactaac catgccgaac gtgacaaaca
     3181 cctgcgtagc gcggagtttc ttaatgttgc gaaattcccg caggcaacct tcacctctac
     3241 cagcgtgaaa aaagagggcg atgaactgga tattaccggc aatctgacgc tcaatggcgt
     3301 gactaaaccg gtgacgctgg aagcgaagct gatgggccag ggcgacgatc cgtggggcgg
     3361 taagcgcgcg ggctttgagg ccgaaggaaa aattaagctg aaagatttca atataactac
     3421 cgatctcggc ccagcctcac aagaggtgga gcttatcatc tcagtagaag gcgttcagca
     3481 gaagtaacgc ctggcgaaat gccggatagc agcctttacg ccgctatccg gcaaaatatt
     3541 actcagccgg atcgggaatg ctcagtttgc tattaagccg accccgcgat ttattaaaaa
     3601 ttttgttgcc gttctcacga cccgcgcgac gtcggcgctg ttcttcctcc ggcaaggcca
     3661 actcttcaca gcattgttca ctacagcagc cgttaaattt actggcgcac tgcggacact
     3721 ggataaacag cagatggcaa ccgtcgtttt tgcagttggt atggctatcg caggacacgc
     3781 cgcactgatg gcaatgcgcg ataacctcat ccgagatgcg ctcgcccatt cgctcatcaa
     3841 atacaaagtt tttgccgata aagcgaacgg gaagcccctg ctcgcgcgcg cgacgggcgt
     3901 actcaatgat gccaccctca atatgccaga ctttattgaa accgttgtgt ttcatccagg
     3961 cgctggcttt ctcacaacga ataccgccgg tacagtacat cactatcttt ttatctgcat
     4021 gttcccgcag catttcaacc gcttttggca actgttcacg aaacgtatcc gccgggattt
     4081 ccagagcatt ttcgaaatgg ccgacttcat actcatagtg gttgcgcata tcaataaaga
     4141 ccgcgtcagg atcgtccagc atcgcattca catctgccgc cttcagataa tcgccgacat
     4201 tactggcgtc aaaactcgga tcgtcaatac cgtcagcgac gatacggtcg cgaactttca
     4261 tacgcagcac ccaaaatgac tttccgtcat cctccagcgc gatatttaaa cgcaccccgt
     4321 ccagcgcggg gtcgaacgta taaagctgtt gacgaaaggt ctcaaccttg ctttgcggca
     4381 cgctgatttg cgcattgatg ccctcatgcg ccaggtaaac gcgaccaaaa acgtccaacg
     4441 ccgtaaacac ctgatacaac gcgtcccgcg tctgttgcgg cgaggcgata gtgaaatatt
     4501 tataaaaaga aattgtcgta cgcggctcgc tttccgccag cattttggct ttcagctcgt
     4561 cattagagat gcggttgtgt aacactggca tggtgtacgt atcctgcaat cagcaaaaaa
     4621 taaagtgggc aggcatgata aggcaagtct cgccaattta catccacaca ttttgcgcta
     4681 catttcctgc tttacgctaa ataattaaca acaattgtcg atttaatcgc cactctcctg
     4741 ctacatattt ttgctcaacg caaaaagatg cgagaatacg gagaattgtt cgttgaaaga
     4801 caggatagaa atgacgaagt tgcctaagtt ctccgtggcc ttactgcacc cgcgctattg
     4861 gttaacctgg ttgggtatag gcgcgctttg gttggtcgtg caactcccct acccggtcat
     4921 ctataaattg ggttgcgcat tgggccacct ggcgcgacgc gtaatgaaac gccgcgcgaa
     4981 aatcgcctat cgcaaccttg aattatgctt tccggaaatg agcgcgcagg aacgccacac
     5041 catggtggtc aaaaactttg aatccgtcgg tatgggcgtg atggaaaccg gcatggcctg
     5101 gttctggccc gatcggcgag tgaaccgctg gatggaagcg agcggtctgg agcatatccg
     5161 tgaagttaag gcgcaggggc tggggttcat tctggtagga atacatttcc ttacccttga
     5221 gtttggcgcc cgcatgtttg gtatgcataa cccgggtatc ggcgtttatc gcccgaatga
     5281 taatccgttg ctcgactggt tacagacctg ggggcgctta cgctccaata aatcgatgtt
     5341 ggatcgcaaa gatctgaaag gtatggttaa ggcattgaaa agcggcgaat tgatctggta
     5401 tgcgccggat cacgattatg gcccgcgcgc cagcgtcttt gtaccgttat tcgccgtcga
     5461 ccaggccgct acgacctccg gtacctggat gctcgcgcgc atgtctaaag cctgtattat
     5521 cccctccgtg cctcgccgta aacccgacgg gaaaggctac gaactgatca tccttcctgc
     5581 ggaatattcg cctccgctgg agagcgcaga agcgactgcc gcatggatga ataagattgt
     5641 tgagcagtgc attatgatgg cgccagagca gtatatgtgg ctgcatcgcc gctttaaaac
     5701 tcgccctgaa ggcgtaccgt cgcgctattg acaggattgc agccgtcagg ctgcaatttt
     5761 tcccctcttt tagctttaaa agctccccac attgcgaggc tggtaaggtc ggcgcataat
     5821 tataattagt acgctcataa ttaaattgat gatagcgcaa aacgcgcatc atactgtgga
     5881 acactatgtc accctctgat gtccccataa actggaaacg caatctaacc gttacctggc
     5941 tgggctgttt tttaaccggc gcggcattca gtctggtcat gccttttctc cctctctacg
     6001 ttgagcaact cggcgtaaca ggccatagcg cgctcaacat gtggtccggg ctggtcttta
     6061 gtattacgtt cctcttttca gctatcgctt cccctttttg gggcggtctg gcggatcgta
     6121 aagggcgtaa gatcatactg ttgcgttccg ctctcggcat ggccattgtg atgctgttaa
     6181 tgggcatggc gcaaaatatc tggcaatttc tgatcctccg cgcgttatta ggcctgctgg
     6241 gcggatttat tcccaacgcc aatgcgctca tcgccactca ggtgccgcgc cacaaaagcg
     6301 gctg
//
LOCUS       DAGWFR010000201         6260 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.204, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000201 DAGWFR010000000
VERSION     DAGWFR010000201.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 6260)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6260)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6260
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.204"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            609..1724
                     /gene="iroB"
                     /locus_tag="MOX77_004063"
     CDS             609..1724
                     /gene="iroB"
                     /locus_tag="MOX77_004063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="salmochelin biosynthesis C-glycosyltransferase
                     IroB"
                     /protein_id="HCA3359460.1"
                     /translation="MRILFVGPPLYGLLYPVLSLAQAFRVNGHEVLIASGGKFAQKAA
                     EAGLVVFDAAPGFDSEAGYRRQEALRKENNIGTKMGNFSFFSEEMTDPLVAFAGQWRP
                     DLIVYPPLGVVGPLIAAKYDIPVVMQTVGFGHTPWHIKGVTKSLSNAYRRHGVSAPPR
                     DLAWIDVTPPSMSILQNDGEPVISMQYVPYNGGAVWEEWWERTPDRKRLLVSLGTVKP
                     MVDGLDLISWVMDSASEVDAEIILHLPANARSDLRSLPPNVRLVDWLPMGIFLNGADG
                     FIHHGGAGNTLTALHAGIPQIVFGQGADRPVNARAVVERGCGIIPGKSGLTSSMINTF
                     LGNRALRETSQEVAAEMAAQPCPTEVAKKLIAMLQHG"
     gene            1805..5461
                     /gene="iroC"
                     /locus_tag="MOX77_004064"
     CDS             1805..5461
                     /gene="iroC"
                     /locus_tag="MOX77_004064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="salmochelin/enterobactin export ABC transporter
                     IroC"
                     /protein_id="HCA3359461.1"
                     /translation="MPATHSPMPARAWIVRLARVCWERKTLSIIVIVASVSTILLAAL
                     TPLITRQAVNDAIAGDTTRLPLLACGLLLIALFDFIGNYVRRGYAGELSLWVQHTLRS
                     RAFDSIQKLDGAGQDALRTGQVISRTNSDLQQVHTLLQMCPVPLAVLTYYVAGIAVML
                     WMSPSMTLIVICVLAALAITALRARRRVFAQTGLASDRLAHMTEHMREVLEQISVVKS
                     CVAELRETRWLDGQSRQMVRVRIGAAISQAMPGATMLALPVIGQIVLLCYGGWSVMNG
                     RIDLGTFVAFASFLAMLTGPTRVLASFLVIAQRTQASVERVFALIDTRSRMEDGTESV
                     EGQIIGLDVEKMSFHYDNGNRILNEISFSIHAGETVAVVGASGSGKSTLLMLLARFYD
                     PTSGGVWLNTTTGQQNIRDLKLTALRRRVGVVFEDAFLFAGTVAENIAYGHPQATQDD
                     IRRAADAAGASGFINALPQGFNTRLTERGSNLSGGQRQRIALARALITAPELLILDDT
                     TSAVDAGTEAEINTALGRYADNEHMLLVIARRRSTLQLADRIVVLDKGRVVDIGTQAE
                     LDARCPTFRSLMSGEGDFLALAPAEQRTLWPTTQAVKSDDAHERQTTAGKGFVDRMTR
                     VPERAVQMALAGHGSQVSSLLTPVAWMFVIAALLIALDSAAGVGVLVLLQRGIDSGVA
                     AGDMSTIGICALLALCLVAIGWCCYALQTIFAARAAESVQHTVRLRSFSHLLRLSLPW
                     HEKHIDSRLTRMTVDVDSLARFLQNGLASAATSIVTMVAIAAAMFWLDPILALTALSA
                     VPVVILATWIYRRLSSPAYAQARLEIGKVNSTLQEKVSGMRVVQSHGQQKQEAARLRA
                     LSDNFRATRVRAQKYLAVYFPFLTFCTEAAYAAVLLIGATRVAEGEMTPGILAAFFLL
                     LGQFYGPVQQLSGIVDSWQQATASGKHINALLATEETENIEPSSITPGTGGALRLEAL
                     TFRYPEKTQPVLDNLSLTIPPGTVVAVVGRSGAGKSTLIKLLAGLYSPGSGQIRVGER
                     LIDAASLSDYRRQTGLVTQDVALFSGDIAENIRYSRPDSSDTEVEIAARQAGLFETVQ
                     HLPLGFRTPVNNGGTDLSAGQRQLIALARAQLAQAHILLLDEATARIDRSAEERLITS
                     LTGVTHTEKRIALIVAHRLTTARRCDVIVVIDKGCIAEYGSHEQLIAAHGLYARLWRA
                     SVGQTRDTQGEVVG"
     gene            5571..>6260
                     /locus_tag="MOX77_004065"
     CDS             5571..>6260
                     /locus_tag="MOX77_004065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase family protein"
                     /protein_id="HCA3359462.1"
                     /translation="MRLSPPVAPVAIQTATRLRRQLAAGSQVDASHFWREANSLALPL
                     VTAINGADDEREVTFLWRAASPLRGVYVRLNRVTDKDNVAKGMMTQLPTTDIWHLTLR
                     LPASYCGSYTMVEIPPKTPDETVLQLGSRFASLVGKADPLNSTPGINVRGNAQESVLA
                     LDHAPAQEEWSGCRAYAGQLFTSEHRLAGQRRRVRLYLPDVPVEQPLGLLVLTDGEIW
                     FDHLGVSAAIDA"
BASE COUNT         1305 a         1765 c         1792 g         1398 t
ORIGIN      
        1 caagaaccaa taaatcgtgt ggctggtgcg ctataaaaat cgcagagcgg tgacgatagt
       61 ccgcataagg agctgttcgt tcgcaacatt cgaacggtga cgttaaagcc ggtttcattg
      121 gctaatgaag acgaagggga caaaattact acagagttga taccacagag atagtccagg
      181 ttcgcaggtg atacgggatt taacgccgga aagtctgcac agacacgatc tgccgccgga
      241 caccattaaa ttgccccgca acgtgttatc aatactactc cctgcgtttc ccgttacctt
      301 gctgtcggta cgtttaccgc attgtctgaa aggttatttg cgaagttatc attaataatc
      361 cacgggcgtc tggtatgcga atccagttcc ccaatcctgg cgttttgcct tctcgaccat
      421 acgcgcgtaa ataagcctga aaccaaactt caccgcttaa cgctctcctc ttccccgatt
      481 tttacgcaaa aaatcatcac atgatcaagg gtcgtattta ttattgcatt tttcaaatga
      541 tattggtaat tattatcatt ctcattaacg acttattcga tttatgacgt ggagagagag
      601 gatttctcat gcgtattctg tttgtcggtc caccactgta tggactgcta taccctgtgc
      661 tgtccctggc gcaagcgttt cgtgttaatg gccatgaagt gctgattgca agcggtggaa
      721 aatttgcaca gaaagcagca gaagctgggt tggtggtatt tgacgctgcg cctggtttcg
      781 attcggaagc gggttatcgc cgtcaggagg cattgcgaaa agaaaataac attggaacaa
      841 aaatggggaa cttctcattt ttcagcgaag agatgaccga cccgctggtc gcgttcgccg
      901 gacagtggcg gccagatctc atcgtctatc ctccccttgg ggtcgttgga ccactgattg
      961 ccgctaagta tgacattccg gtagtaatgc aaaccgtcgg cttcggtcat acgccctggc
     1021 acatcaaagg cgtgacgaaa tcactttcta acgcctaccg ccgccatggg gtcagcgcgc
     1081 caccaagaga tctggcgtgg atagacgtca caccgcccag catgagcata ctgcaaaatg
     1141 acggagagcc ggttatctcc atgcaatacg tcccgtataa cggcggcgcc gtctgggaag
     1201 aatggtggga acgtacacct gatcgcaagc gtcttctggt tagcctcggc accgtcaaac
     1261 cgatggtgga tggcctggat ctgatttcct gggtaatgga ttctgccagc gaagtagatg
     1321 ccgaaatcat tctgcatctt ccggcaaacg cccgctcgga tttacgttct ctgccgccga
     1381 atgtccgtct ggtcgactgg cttccgatgg gcattttcct taacggcgcc gacggtttta
     1441 tccaccatgg cggcgcaggc aacactctga cggcgctgca tgccggcatt ccgcagatag
     1501 tctttggcca gggtgccgac agacctgtca atgcccgcgc cgtggtcgag cgcggatgcg
     1561 gcattattcc cggtaagagc ggacttacga gcagcatgat caataccttt ctcggtaatc
     1621 gcgcgcttcg cgagacgtcg caggaagtcg cggcggaaat ggcggcccag ccttgcccga
     1681 ccgaggtggc aaaaaaactg atcgccatgc tgcaacacgg ctaaccgcgg cagcgcaatg
     1741 acaatatggc ggctgagccc agactgtgtc gccataactc atctttcacc gataaggagg
     1801 cttaatgccc gcgactcatt cccccatgcc cgctcgtgcc tggatagttc gccttgcccg
     1861 cgtgtgttgg gaacgtaaaa cactgagcat cattgtcatc gtagcatcag tatcgaccat
     1921 tttactggct gcgctgacgc cgctaataac gcgtcaggcc gtcaatgacg cgatagcagg
     1981 cgatacgacc cgcctgccgt tacttgcctg cggcctgctg ttaattgccc tttttgattt
     2041 tatcgggaat tacgtgcgcc gcggctatgc cggagaactc tcgttgtggg ttcagcatac
     2101 gttacgtagc cgtgcgttcg acagtattca aaaactggac ggcgcaggcc aggacgcctt
     2161 gcgtaccggg caggtcattt cgcgtaccaa cagcgatctt caacaggtac acaccttgct
     2221 acagatgtgt ccggtgccgc tggcggtgct cacttactat gtggccggta tcgcggtgat
     2281 gctatggatg tcgccatcca tgacgcttat cgtgatttgc gtactggccg cccttgctat
     2341 taccgccctg cgcgcccgtc gccgtgtttt cgcgcaaacg gggcttgcct cagaccggct
     2401 ggcgcacatg acggaacata tgcgcgaagt attggaacag atctcagtgg tgaagtcctg
     2461 cgtggcggag ttacgcgaaa cgcgttggct cgatggtcag tcgcggcaga tggtgcgggt
     2521 acggatcggt gccgctatct cgcaggcgat gccgggcgca accatgctgg cgctaccggt
     2581 gatagggcag atcgtcctgc tgtgctatgg cggctggtcg gtgatgaacg ggcgcatcga
     2641 tctgggaacc ttcgtagcgt tcgcgagttt tctcgctatg ttgaccggcc ctacccgcgt
     2701 actggcatcg tttttggtta tcgcacagcg cacacaggcg tcggtagagc gcgtcttcgc
     2761 gcttatcgac acgcgttctc gcatggaaga cggtactgag tcggttgagg gtcagattat
     2821 cgggctggac gtggagaaga tgagtttcca ctacgacaac ggtaaccgta tcctcaatga
     2881 gatctcgttt tccattcacg ccggtgaaac cgtggcggtg gttggcgcat ccggctccgg
     2941 gaaatcaaca ttgctgatgt tgctggcgcg cttttacgat cccacctccg gcggagtatg
     3001 gctcaacacc actacgggtc aacagaatat tcgcgacctg aaactgacgg cgcttcgtcg
     3061 tcgcgttggc gtagtttttg aagacgcgtt tctgtttgcc ggtacggtgg cggaaaacat
     3121 cgcctatggg cacccgcaag cgactcagga cgacattcga cgcgccgccg atgccgcagg
     3181 cgccagcggg ttcatcaatg cgctaccgca ggggttcaac acccgactga ccgaacgcgg
     3241 aagcaacctc tccggcggcc aacgccagcg tattgcgcta gcccgggcac tgattaccgc
     3301 gccggaactg ctgattctcg atgacaccac ctcggcggtc gatgccggta ctgaagcgga
     3361 aattaacacg gctcttggtc gttatgccga taatgagcat atgctgctgg tgattgcacg
     3421 ccgccgttca acactgcagt tagccgatcg gatcgtcgtg ctggataaag gccgcgtcgt
     3481 ggatatcggt acccaggcgg agctggatgc aaggtgtccg acgtttcgct cgctgatgag
     3541 cggcgagggg gattttctcg cccttgcccc ggcagaacaa cgtacgctat ggccaacaac
     3601 gcaggcggta aaatccgacg acgcgcatga gcgccagaca accgccggaa aaggttttgt
     3661 cgaccggatg acgcgcgttc cggaacgcgc cgtacagatg gcgctggcag gccacgggag
     3721 tcaagtctca tcgctgctga cgccagtagc ctggatgttc gtcatcgccg ccctgcttat
     3781 cgcgcttgat tccgccgcag gcgttggcgt gctggtgctt ttgcagcgcg gtattgactc
     3841 aggcgttgcc gcaggggata tgtcgactat tggcatatgc gccctgctcg cgctgtgcct
     3901 ggtggcgatc ggttggtgct gctatgcgct gcaaacgatc ttcgccgccc gcgcggcaga
     3961 gtcggtacag catacggtac gcttacgcag cttcagccac ctgctacgcc tgagtcttcc
     4021 ctggcacgag aagcacatcg actcgcgtct tactcgcatg accgtcgacg ttgattcact
     4081 cgcccgattt ctgcaaaacg gtcttgccag cgcggccacc agcatcgtga cgatggtcgc
     4141 tatcgccgcg gcaatgttct ggcttgaccc cattcttgcg ttaacggcat taagcgccgt
     4201 acctgtagtg atactggcga cgtggattta ccgccgtttg agctcgcctg cttacgccca
     4261 ggcacggctg gaaattggta aggtgaacag tacgcttcag gaaaaggtct ccggtatgcg
     4321 ggtagtgcag tcacacggtc aacagaagca ggaagccgcc aggctacggg cgttatcaga
     4381 caacttccgc gccacccgcg tgcgggcgca aaaatacctt gctgtctatt ttccgttcct
     4441 gaccttctgc accgaggctg cctatgccgc cgtgctttta atcggagcga cccgggtcgc
     4501 cgaaggcgaa atgacgcccg ggatactggc ggcgttcttc ctgctattgg gacaatttta
     4561 tggcccggta cagcagttgt caggcattgt tgattcctgg cagcaggcga ccgccagcgg
     4621 caaacatatc aatgcgctat tggcgactga ggaaacggag aatattgaac cgtcctccat
     4681 aacgcctggc actggcggcg cgctacgtct ggaggcattg acattccgct atcccgaaaa
     4741 aacgcaacct gtgcttgata atctctcgct caccattccg ccaggaacgg tagtcgcggt
     4801 ggtcggacgt agcggcgccg gcaaatcgac gctgatcaag ctgctggccg ggctctactc
     4861 tcccggcagc gggcaaatcc gtgtcggtga gcgcctaatt gatgccgcgt cgcttagtga
     4921 ttatcgtcgc cagacggggc tggtcaccca ggatgtcgca ttatttagcg gcgatattgc
     4981 cgaaaatatc cgctattcgc ggccagacag cagcgacacg gaggtggaga tcgcggcgcg
     5041 acaggcggga ctctttgaaa ctgtgcaaca tctgccgctg gggtttcgta ctccggtcaa
     5101 taacggcggc acggatctgt ccgcgggcca gcgtcagttg attgccctcg cgcgcgccca
     5161 actggcacag gcgcacattc tgctgctcga cgaggcgaca gcacgtatcg accgcagcgc
     5221 cgaggagcgc ttaataacct cgcttaccgg agtgacgcat accgagaaac gcatcgcgct
     5281 tatcgtcgcg caccgactga ccaccgctcg ccgctgcgat gttattgtcg taatcgataa
     5341 aggatgtatc gctgaatatg gcagccatga gcagttgata gcggctcatg gcctgtatgc
     5401 tcgtctgtgg cgggccagcg tcggccagac acgcgatacg caaggagagg tcgtaggata
     5461 gtttttatcg ccacgattta cgcaaaagaa agcccgcaag cggctgttcc tgtaacagcc
     5521 gctttagcta ttgatactga ccgaaatata aacgagatgg aatacaaaga atgagactga
     5581 gcccgcccgt cgctcctgtc gctatacaga ccgctacgcg ccttcgccgt caactcgccg
     5641 ccggaagcca ggttgacgct tctcacttct ggcgagaagc aaactcgctc gcgctgccgc
     5701 tggtgacagc cattaacggc gcagacgatg aacgggaagt caccttcctg tggcgtgccg
     5761 cctctcctct gcggggggtt tatgttcgcc tgaaccgtgt caccgataaa gataacgtgg
     5821 cgaaaggtat gatgacgcaa ctgcccacaa cggatatctg gcatctgacg cttcgcttac
     5881 cggcgtccta ctgcggttcc tatacgatgg tcgaaatacc accgaaaacc ccggacgaga
     5941 cggtgttgca gcttggaagc cgtttcgcct cccttgtcgg gaaggcggac ccactgaaca
     6001 gcacgccggg aataaatgtt cggggcaatg cgcaggagtc cgttctggcg ttggatcatg
     6061 ccccggcaca ggaggagtgg tcaggctgtc gcgcttacgc cgggcagctt ttcacctcag
     6121 aacatcggct cgccggacaa cgtcgccgtg tgcggctgta tcttcctgac gttcctgtcg
     6181 aacaaccgct gggcttgctg gtactcacgg atggcgagat ctggttcgac catcttgggg
     6241 taagcgccgc cattgacgcc
//
LOCUS       DAGWFR010000202         6228 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.205, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000202 DAGWFR010000000
VERSION     DAGWFR010000202.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 6228)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6228)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6228
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.205"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(87..1817)
                     /gene="dld"
                     /locus_tag="MOX77_004066"
     CDS             complement(87..1817)
                     /gene="dld"
                     /locus_tag="MOX77_004066"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-lactate dehydrogenase"
                     /protein_id="HCA3359463.1"
                     /translation="MSSITMTDNKTFLNELARLVGHSHLLTDPAKTARYRKGFRSGQG
                     DALAVVFPGSLLELWRVLNACVNADKIILMQAANTGLTEGSTPNGNDYDRDIVIISTQ
                     RLDKLHLLDNGQQVLAWPGTTLYALEKALKPLGREPHSVIGSSCIGASVIGGICNNSG
                     GSLVQRGPAYTEMSLFARIDEQGKLQLVNHLGIDLGHTPEQILSKLDDERIKDEDVRH
                     DGRHAHDHDYVTRVRDINADTPARYNADPDRLFESSGCAGKLAVFAVRLDTFAAEKNQ
                     QVFYIGTNQPAVLTEIRRHILANFDNLPVAGEYMHRDIYDIAEQYGKDTFLMIDKLGT
                     DKMPFFFTLKGRTDAMLEKVKFFRPHFTDRAMQKFGHLFPSHLPPRMKNWRDKYEHHL
                     LLKMAGDGVAEAQRWLNEFFKSAEGGFFTCTPEEGSKAFLHRFAAAGAAIRYQAVHAD
                     EVEDILALDIALRRNDTDWFEHLPPEIDSQLVHKLYYGHFMCHVFHQDYIVKKGVDVH
                     ALKAQMLELLQARGAQYPAEHNVGHLYKAPETLTRFYRQNDPTNSMNPGIGKTSKRKF
                     WQENTPDETH"
     gene            2084..4381
                     /gene="bglX"
                     /locus_tag="MOX77_004067"
     CDS             2084..4381
                     /gene="bglX"
                     /locus_tag="MOX77_004067"
                     /EC_number="3.2.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-glucosidase BglX"
                     /protein_id="HCA3359464.1"
                     /translation="MKWLCSVGVAVSLAMQPALAENLFGNHPLTPEARDAFVTDLLKK
                     MTVDEKIGQLRLISVGPDNPKEAIREMIKDGQVGAIFNTVTRQDIRQMQDQVMALSRL
                     KIPLFFAYDVVHGQRTVFPISLGLASSFNLDAVRTVGRVSAYEAADDGLNMTWAPMVD
                     VSRDPRWGRASEGFGEDTYLTSIMGETMVKAMQGKSPADRYSVMTSVKHFAAYGAVEG
                     GKEYNTVDMSSQRLFNDYMPPYKAGLDAGSGAVMVALNSLNGTPATSDSWLLKDVLRD
                     EWGFKGITVSDHGAIKELIKHGTAADPEDAVRVALKAGVDMSMADEYYSKYLPGLIKS
                     GKVTMAELDDATRHVLNVKYDMGLFNDPYSHLGPKESDPVDTNAESRLHRKEAREVAR
                     ESVVLLKNRLETLPLKKSGTIAVVGPLADSQRDVMGSWSAAGVANQSVTVLAGIQNAV
                     GDGAKILYAKGANITNDKDIVDFLNLYEEAVKIDPRSPQAMIDEAVQAAKQADVVVAV
                     VGESQGMAHEASSRTNITIPQSQRDLITALKATGKPLVLVLMNGRPLALVKEDQQADA
                     ILETWFAGTEGGNAIADVLFGDYNPSGKLPISFPRSVGQIPVYYSHLNTGRPYNPEKP
                     NKYTSRYFDEANGPLYPFGYGLSYTTFTVSDVTLSSPTMQRDGKVTASVEVTNTGKRE
                     GETVIQMYLQDVTASMSRPVKQLKGFEKITLKPGERKTVSFPIDIEALKFWNQQMKYD
                     AEPGKFNVFIGVDSARVKQGSFELL"
     gene            4563..5480
                     /locus_tag="MOX77_004068"
     CDS             4563..5480
                     /locus_tag="MOX77_004068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HCA3359465.1"
                     /translation="MTISKLWVSSLALLATVSLPLQAASPVTVGSKIDTEGALLGNMI
                     LQVLESHGVKTVNKIQLGTTPVVRGAITAGELDIYPEYTGNGAFFFKDENDPAWKNAK
                     QGFEKVKKLDAEQNKLVWLTPAPANNTWTIAIRQDIAEKNKLSSLADLSRYLKEGGTF
                     KLAASAEFIERSDALPAFEKAYDFTLNQNQLLSLAGGDTAVTIKAAAQQTSGVNAAMA
                     YGTDGPVAALGLQTLSDPKGVQPIYAPAPVVRESVLQAYPQIADWLQPVFASLDEKTL
                     QQLNARIAVEGLDAKKVAADYLRQKGWVK"
     gene            5484..>6228
                     /locus_tag="MOX77_004069"
     CDS             5484..>6228
                     /locus_tag="MOX77_004069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCA3359466.1"
                     /translation="MSDAAKKITVNRVLLLLVVLALLAVALPFINYAPNRLVSGEGRQ
                     LWEIWPATIWMLTGAGCALFTLCFVPGKRGSVLTLMMAQTLFIVMLWGVGRAATQLAQ
                     EGSPLARTSLGSGLWLGLGLMLLACSDAIRRITVGPLWRWLLHAQIVIVPLALLFSGT
                     FDNLSLLKEYTNRQDVFDAALVQHLMLLAGTVLPALAIGLPLGVWCYFSASRQGPVFT
                     VLNVIQTIPSVALFGLLIAPLAGLVKQFPW"
BASE COUNT         1414 a         1597 c         1789 g         1428 t
ORIGIN      
        1 cggagcgcaa accgcacaga acgattaagt cgccgcaggc ccggcaggca tcgcgccgcc
       61 gggcattcac ggtaaaccac accgtgttaa tgcgtttcgt cgggcgtatt ttcctgccag
      121 aatttccgct tactcgtttt gccgataccg gggttcatac tgttggttgg gtcattttgc
      181 cgataaaaac gcgtcagcgt ttccggcgct ttatacagat gtccaacgtt gtgctccgcc
      241 gggtattgtg ccccgcgcgc ctgcaacagc tccagcattt gcgctttcag cgcatggacg
      301 tcgacgcctt tcttcacgat atagtcctga tgaaaaacgt ggcacataaa gtgaccgtaa
      361 tagagtttat gtaccagttg gctgtcgatt tccggcggca gatgctcgaa ccagtcggta
      421 tcgttgcggc gcagggcgat atccagcgcc agaatatctt ccacttcatc agcgtgtacg
      481 gcctgataac gaatcgctgc gccagcagcg gcgaagcggt gcaggaaggc tttgctgcct
      541 tcttccggcg tacaggtgaa gaaaccgccc tcagcggatt taaaaaattc attcagccag
      601 cgttgcgctt ctgcgacgcc gtctcccgcc atttttaaca gcagatgatg ctcatattta
      661 tcgcgccagt ttttcattcg cggcggcaga tggctgggaa acagatggcc gaatttctgc
      721 atcgcgcggt cggtgaaatg cggtcggaaa aattttactt tttccagcat cgcatcggtt
      781 cggcctttta gcgtgaaaaa gaatggcatc ttgtcggtgc cgagtttatc gatcatcaga
      841 aaggtatctt taccgtactg ctccgcaata tcgtagatat cgcgatgcat atattctccc
      901 gccactggca gattgtcgaa gttcgccaga atatgccgac ggatttcagt cagtaccgcg
      961 ggctgattgg tgccgatata aaaaacctgc tgattttttt ccgctgcaaa ggtatcaagg
     1021 cgaacggcaa aaaccgccag ttttccggcg cagccggaag attcaaacaa acggtccggg
     1081 tcggcgttat agcgggcggg cgtatcggcg ttgatatctc gtacccgcgt cacgtagtcg
     1141 tgatcgtgcg catgacgacc atcgtgacgc acatcctcat ctttaatccg ttcatcatcc
     1201 agcttgctca ggatctgctc cggcgtatgc ccaagatcga tacccagatg attgaccagt
     1261 tgcagtttgc cttgctcgtc aatacgggca aagagcgaca tctcggtata ggccgggccg
     1321 cgctgcacca gcgagccgcc ggagttatta cagatgccgc cgatgaccga cgcgccgata
     1381 cacgacgaac caatcaccga gtgcggttca cggcccagcg gtttaagcgc tttttccagc
     1441 gcatagagcg tcgtaccggg ccaggccaga acctgttggc cgttatccag taagtgcagc
     1501 ttatccagcc gctgggtgct gataatcaca atatcgcgat cgtagtcgtt gccgttcggc
     1561 gtggagcctt ccgtcagacc ggtgttggcg gcctgcatca gaataatttt gtcagcgtta
     1621 acgcaggcgt tgagcacacg ccacagttcc agtaatgaac ccgggaaaac aacggccagc
     1681 gcgtcgccct gaccggaacg gaaacccttg cgatagcggg cggttttggc ggggtctgtc
     1741 agcaggtgag aatggcctac caggcgggcc agctcattca ggaacgtttt attatcagtc
     1801 attgttatgg aagacattct ccactccttg tggtgggaca aaatatcagc gttaagcata
     1861 gcgctttgta tgacaatacg ctttctcatt caaattgttt ctgtgttggt ggtattcatt
     1921 tgccgccttg ataccatttg ctggcggttg cgtattcgac tgtgcggaaa attaggagaa
     1981 taaccttcgc tttcttctcc tctcgcgttt aggcttatgg caaactgcgg tttttattct
     2041 gtttttaccg cctcgtcggg ataaagataa agagagactc aacatgaaat ggttatgttc
     2101 agtaggtgtt gctgtgagtc tggcgatgca gccagcattg gcggaaaacc tgtttggcaa
     2161 tcacccgctg acgcccgaag cgcgcgacgc gttcgtcacg gatttactca agaaaatgac
     2221 tgtcgatgaa aaaattggtc agttacgtct gattagcgtc ggccctgata acccgaaaga
     2281 agcgattcgc gagatgatca aagacgggca ggtaggggcg attttcaata ccgtcacccg
     2341 ccaggatatc cgtcaaatgc aggatcaggt gatggcattg agccgcctga aaattcctct
     2401 cttttttgct tatgacgtgg tacacggcca gcgaaccgtc ttcccgataa gcctcggtct
     2461 ggcttcttct tttaatctgg atgcggtaag aaccgtagga cgcgtatcgg cgtatgaagc
     2521 ggcggacgac ggtctgaata tgacttgggc gccgatggtg gatgtctccc gcgatccgcg
     2581 ttggggacgc gcctccgaag gctttggcga agatacatat ttaacctcca tcatgggcga
     2641 aaccatggtg aaagcgatgc agggcaaaag cccggcggac cgctattcgg tgatgaccag
     2701 cgtgaaacat tttgccgcct atggcgccgt tgaaggcggt aaagaataca acaccgtgga
     2761 tatgagttcc cagcgtctgt ttaatgacta catgccgccg tacaaagcgg ggctggatgc
     2821 ggggagcggc gcggtgatgg tggcgctgaa ctcgctgaac ggcacgcctg cgacgtcaga
     2881 ttcctggcta ttgaaagatg tcctgcgcga tgagtggggc tttaagggaa ttaccgtttc
     2941 cgaccacggc gctattaaag aactgattaa acacggtacc gcggccgacc cggaagatgc
     3001 ggtgcgcgtg gcgctaaagg caggggtgga tatgagcatg gcggatgagt attacagcaa
     3061 atatctgccg ggtctgatta agtcgggcaa agtgacgatg gcggaactgg acgacgcgac
     3121 gcgccatgtg ctcaacgtaa aatatgacat gggattgttt aacgacccct atagccatct
     3181 gggaccgaaa gagagcgacc cggtggacac caatgccgaa agccgcctgc atcgtaaaga
     3241 ggcacgggaa gtggcgcggg aaagtgtggt tctgctgaaa aaccggctgg aaacgctgcc
     3301 gctgaaaaaa tcgggcacca ttgccgttgt tgggccgctg gccgacagtc aacgtgatgt
     3361 aatgggaagc tggtctgctg ctggggtcgc gaatcagtca gtgacggtgc tggcgggtat
     3421 tcaaaatgcc gtcggtgacg gggcgaagat cctctatgcc aaaggggcga atatcactaa
     3481 cgataaagat atcgtcgatt tcttaaacct gtatgaagag gcggtgaaaa tcgatccgcg
     3541 ctcaccgcag gcgatgattg atgaggcggt gcaggcggcg aaacaggccg atgtagtggt
     3601 cgcagtggta ggcgagtcgc aggggatggc gcatgaagcc tccagtcgta ccaatatcac
     3661 cattccgcag agtcagcgcg acttaatcac cgctctgaaa gccaccggta agccgctggt
     3721 actggtatta atgaacggca gaccgctggc gctggtaaaa gaagatcaac aagccgatgc
     3781 gattctggag acctggtttg ccgggacgga aggcggcaac gccattgccg atgtgctgtt
     3841 tggcgattac aacccgtcag gcaaactgcc gatctccttc ccgcgttcgg tgggacaaat
     3901 tccggtctat tatagccatc tcaatacggg acgcccgtat aatcctgaaa agccaaacaa
     3961 atacacctca cgctattttg acgaagcgaa tggcccgctc tatccgtttg gttacggtct
     4021 gagctacacc acatttacgg tgtctgacgt cacgctctcc tcaccgacaa tgcaacgcga
     4081 cggcaaagtc acggccagcg tagaggtcac gaataccggt aaacgcgaag gggaaacggt
     4141 catccagatg tacttacagg atgtcacggc gtcgatgagc cgcccggtga agcaattaaa
     4201 aggctttgaa aaaatcaccc tcaagcccgg cgaacgtaaa accgtgagtt tcccgattga
     4261 tatcgaggcg ttgaagttct ggaatcagca gatgaaatat gacgcggaac ccggcaagtt
     4321 caacgtcttt atcggcgtgg attccgctcg cgttaaacaa ggatcgttcg agctactgta
     4381 agcctgccgt caacagggcg cgatagcagc gccctgtctg gcaatgactt tttctgtccc
     4441 ccccttttat tgcctgccac gtcacttaaa ctgccggaaa atcccaggtt aaacgcagac
     4501 ttttcaacta tgcttttttc tcaagtttct gaaaaaggcc gtaaaaggat gaggaaagca
     4561 tcatgacgat ctcaaagcta tgggtaagtt cgctggcgtt gctggcgacg gtgagtttac
     4621 ctctacaggc ggcatcgccc gtgacggtcg ggtcaaagat tgataccgaa ggcgcactgc
     4681 tcggcaacat gattttgcag gtactggaaa gccacggcgt taaaacggtc aataaaattc
     4741 agctcgggac gacgccagtc gttcgtggcg cgattaccgc cggagagctg gatatctatc
     4801 cggaatacac cggtaacggg gcgttctttt ttaaagatga aaacgatccg gcatggaaaa
     4861 atgcaaagca aggctttgag aaagtcaaaa aactggatgc ggagcagaat aagctggtct
     4921 ggttgacgcc tgcgccggcc aacaacacct ggaccatcgc gatacgtcag gacatcgcgg
     4981 aaaaaaataa actctcctcg cttgccgatc tcagccgtta tctgaaagag ggcggcactt
     5041 ttaaactggc ggcgtctgcg gaatttatcg aacggtcgga tgcgctgccg gcatttgaaa
     5101 aagcctatga ttttaccttg aatcagaacc agctcttgtc gctggcgggc ggcgatacgg
     5161 cggtcacgat caaagccgcc gcgcaacaaa catccggtgt taacgccgcg atggcgtatg
     5221 gcaccgacgg cccggtcgcc gcgctgggtc tgcaaaccct gagcgacccg aaaggcgtcc
     5281 agcctatcta tgcccccgcg ccggtagtgc gtgaatcggt gttacaggcc tatccgcaga
     5341 tagccgattg gctgcagccc gttttcgcca gccttgatga gaaaacgctg caacagttga
     5401 acgccagaat cgccgtagaa gggctggatg cgaaaaaagt cgccgcagat tacctccgac
     5461 aaaaagggtg ggtgaagtaa tctgtgagtg acgctgccaa aaaaattacg gttaatcgtg
     5521 tgctgttgct gttggttgtt ctggccctgc ttgctgtcgc gctgcctttc attaattacg
     5581 ccccgaatcg tctggtgagc ggcgaggggc gccagttatg ggagatctgg ccggcgacca
     5641 tctggatgct gactggcgcg ggatgcgcgc tgtttacgct gtgctttgtg cccggtaaac
     5701 gcggtagcgt actgacgctg atgatggcgc agacgctttt tattgtcatg ctgtggggag
     5761 tcggcagggc ggcgacccag ttggcgcagg agggcagtcc gctggcgcgt accagtctgg
     5821 gaagtggatt gtggctgggc ctcggtctga tgctgctggc ctgtagcgat gcgatccgcc
     5881 gtattaccgt tgggccgctg tggcgctggt tgctgcacgc gcaaattgtc attgtcccgc
     5941 tggcgctgct gttttcaggc acgttcgaca acctctcgct tctgaaagag tataccaacc
     6001 gccaggatgt tttcgatgcc gcgctggtgc aacatttaat gttactggcg ggcacggtgc
     6061 tgccggcgct ggcgatcgga ctaccgttgg gcgtctggtg ttatttttcc gcctcacgcc
     6121 aggggccggt gtttaccgta ctgaatgtga tccagactat tccttccgtc gcgctgtttg
     6181 gcctgctgat cgcgccgttg gccgggctgg tgaaacagtt tccgtggc
//
LOCUS       DAGWFR010000203         6204 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.206, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000203 DAGWFR010000000
VERSION     DAGWFR010000203.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 6204)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6204)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6204
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.206"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..1125
                     /locus_tag="MOX77_004070"
     CDS             <1..1125
                     /locus_tag="MOX77_004070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCA3359467.1"
                     /translation="GMTLTSLPLRLAVSRLLRQPWSTLSQLSAFSLSFMLLALLLVLR
                     GDLLDRWQQQLPPESPNYFLINIASEQVAPLKAFLAEHQVIPQTFYPIVRARLTEING
                     NPTEGQQDESLNRELNLTWQDTRPAHNPLVAGHWPPKPGEVSMEEGLAKRLNVKLGDS
                     VTFMGDTQAFSAKVTSLRQVDWESLRPNFFFIFPSGALDGQPQSWLTSFRWENGNGML
                     TQLNREFPTVSLLDIGAILKQVGQVLEQVSRALEVMVVLVTLCGMLLLLAQVQVGMRQ
                     RHQELVVWRTLGAGKKLLRTTLWCEFAMLGLVAGLVAAIGAETALAILQINVFDFPWE
                     PDWRLWVALPFCGALLLSVCGGWLGVRLLKGKALFRQFSG"
     gene            1311..2444
                     /locus_tag="MOX77_004071"
     CDS             1311..2444
                     /locus_tag="MOX77_004071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HCA3359468.1"
                     /translation="MTIKITALAASIGAAVAFMPFATQAEITVLKQDPQAGNPLSRLN
                     FTVGGSIRPQFQNMTGNDGANGYKRNGFDGGTRFRFAADYYLFDDISWISYYELGVNI
                     PAVFDWDNHYAKGTTDTTRRMLYTGFKSATWGTLTFGQQNSIYYDVVGVKTDIWDYDM
                     IGQAPGNGINGDYDGSYRTRKSLKYKKSIGNVDLYASYLFSDDYNANNGLNYKRKGGG
                     SLGADYHLTDDLTWGTAWNYTRAEMRGNGNKTYDQNIVGTALSWTPENWTIAAGGGWY
                     QNFMTTKKVSVNDYFAGDAWGLEYFVGYAFPIGQYAVKAIQPYFMGDRIEYVNGRDYL
                     RTDNGVGITFQLDYGFRVDYEHVFTSSTDNLGDMNLVRLRYDF"
     gene            2701..3531
                     /locus_tag="MOX77_004072"
     CDS             2701..3531
                     /locus_tag="MOX77_004072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter substrate-binding protein"
                     /protein_id="HCA3359469.1"
                     /translation="MGLRQSLRIAASTLLLACGLQFAHADGSPQTIVFGVAPGPYGDM
                     VKQAIAPTLKEKGYKVVVREFSDYVQPNMALANGSIDANLFQHTLYFDKFTADKGLKL
                     SKLIVVPTAGMGFYSRKINSLDALKKGDIITLSNDPTNLARGLRFLQSLGLITIKHNI
                     DPTKASERDIASNPKGLVFKPLEAAQLPRTLDGVTGALVNGNFAVAAGLDLSSAIKQE
                     HLDENLKNIIAVRSEDADKPFAKDIVEAVKSPAYRAVIDDPKNIYSAFQKPEWMTATP
                     "
     gene            3568..4584
                     /gene="sfbB"
                     /locus_tag="MOX77_004073"
     CDS             3568..4584
                     /gene="sfbB"
                     /locus_tag="MOX77_004073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence-associated ABC transporter ATP-binding
                     protein SfbB"
                     /protein_id="HCA3359470.1"
                     /translation="MIEIEKVCVDFTAGRGTPTRAVDDVSLHIAAGEIFGIVGTSGAG
                     KSTLLRTLNALTRPSQGRVNVNGVEISALDGKALRQARQRIGMIFQHFNLMHTRTVAK
                     NVAFSLKAAGWERSKIAPRVAEILTLVGLADKANCFPVQLSGGQKQRVGIARAIANHP
                     DVLLCDEPTSALDLETSATILALLRQINAQLGITIVLITHEMNVIKSICDRVAVMSGG
                     KVVESGEVFDVFAHPQHAFTQQLVSHTLNLTLPERLREHLPGQLLKILFIGDSAEQPV
                     LSEVAIKFGVAVNILHGKIEYIGERALGILVVQLTAPHNPTAVAAAVEHIRQRTAQVE
                     VIRG"
     gene            4577..5236
                     /locus_tag="MOX77_004074"
     CDS             4577..5236
                     /locus_tag="MOX77_004074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCA3359471.1"
                     /translation="MDDLLPDLTLAFNETFQMLSISTVLAILGGLPLGFLIFVTDRHL
                     FWQNRFIYLVASVLVNIIRSVPFVILLVLLLPLTQLLLGNTIGPIAASVPLSVAAIAF
                     YARLVDSALREVDKGIIEAALAFGASPMRIICTVLLPEASAGLLRGLTITLVSLIGYS
                     AMAGIVGGGGVGDLAIRYGYYRYETEVMVVTVVALIVLVQVVQMLGDWLAKRADKRDR
                     H"
     gene            complement(5275..>6204)
                     /gene="mnmH"
                     /locus_tag="MOX77_004075"
     CDS             complement(5275..>6204)
                     /gene="mnmH"
                     /locus_tag="MOX77_004075"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-selenouridine(34) synthase MnmH"
                     /protein_id="HCA3359472.1"
                     /translation="KRQGADAALALGHRLVCGDIRQQRLEAWKAAYQRFPNGYLCCAR
                     GGQRSHIVQRWLQETGIDCPLIEGGYKALRQTAIQATWQLAQKPILLIGGCTGSGKTQ
                     LVRQQPNGVDLEGLARHRGSSFGRTLKPQLSQASFENKLAVELLKINARQTLKRWVLE
                     DEGRTIGANHLPECLRERMAQAPIAVVEDPFALRLERLREEYFIRMHHDFTHAYGDGA
                     GWQAYSEYLHHGLFAIRRRLGLQRFAELTDTLDRALAEQLSSGSTDGHMAWLVPLLNE
                     YYDPMYRYQLEKKAANIVFRGTWQDVANWLKAQ"
BASE COUNT         1376 a         1579 c         1740 g         1509 t
ORIGIN      
        1 ggcatgacgt tgacgtcgct accgctgcgt ctggccgtca gccgacttct gcgtcagccg
       61 tggtcaacgt tgagtcagct ttcggcgttt tcgctttcgt ttatgctgct ggcgctcttg
      121 ctggtgctgc gcggcgacct ccttgatcgc tggcaacagc agctcccgcc ggaaagcccg
      181 aactatttcc ttatcaatat tgcttcagaa caggtcgcgc cgctgaaagc ctttttggcg
      241 gaacatcagg tgatcccgca gacgttttat ccgattgtgc gggcgcggtt aacggagata
      301 aacggtaatc cgacggaagg tcagcaggat gagtcgctca accgtgaact gaatttgacc
      361 tggcaggata cgcgcccggc gcataatccg ctggtcgccg gtcactggcc gccaaaaccg
      421 ggcgaagtct ctatggaaga ggggctggcg aagcggctga acgtcaaact cggcgatagc
      481 gtaaccttta tgggcgatac ccaggcattt agcgctaaag tcaccagcct gcgtcaagtg
      541 gactgggaaa gcctgcggcc caactttttc ttcatttttc cttccggggc gctggacggg
      601 caaccacaaa gctggttgac cagttttcgc tgggagaatg gcaacggcat gttaacgcag
      661 cttaaccgcg agtttcctac cgtcagcctg ttagatatcg gggcgatcct gaaacaggtg
      721 ggacaggtgc tggagcaggt cagtcgggcg ctggaggtga tggttgtgct agtcactctc
      781 tgcggcatgt tgctattact ggcccaggta caggtcggga tgcgtcagcg ccatcaggag
      841 ctggtggtgt ggcgcacgtt aggagccgga aagaaactgt tgcgtaccac actctggtgc
      901 gaattcgcca tgctggggtt agttgccggg ctggtcgccg cgattggcgc ggagacggcg
      961 ctggcgatct tacaaatcaa cgtttttgat ttcccctggg agccggactg gcgtttatgg
     1021 gtcgcactgc cgttttgcgg cgcgctgctg ctttccgtat gcggcggctg gcttggcgtt
     1081 cgtttgctta aaggcaaagc gctattccgc cagtttagcg gatgattcat gatgtgaata
     1141 atttcgcgct ggtttttaaa acggcgcgta cttttttagt cgcacaaatt gataactcct
     1201 tgatttttag tagcacaaat cattaaaaaa tacacaacac gtaaggtttt ataacagtta
     1261 ttatttgcct gctaaatgat ttggattggc tatctatcaa ggaaaatata atgacaatta
     1321 aaataacagc gttggcggca tcgatcggcg cggcagtggc tttcatgcct ttcgccactc
     1381 aggcggaaat caccgtttta aaacaagatc cccaggcggg taatccactc agccgactca
     1441 atttcaccgt tggcgggagt attcgtccgc agttccagaa tatgaccggt aatgacggcg
     1501 cgaacggtta taaacgtaat ggttttgatg gcgggacgcg tttccgcttc gccgcggatt
     1561 attatctgtt tgatgatatc agttggatta gctattacga gctgggcgtc aatatccctg
     1621 cggtatttga ctgggataac cattatgcga agggcacgac tgataccact cgccgtatgc
     1681 tgtatactgg cttcaagagc gcgacgtggg gaacgctgac cttcggtcaa cagaacagca
     1741 tttattacga tgtggtgggc gtaaaaaccg atatctggga ttacgacatg ataggtcagg
     1801 cgccgggcaa cgggattaac ggcgactacg atggttctta ccgtacgcgt aagtcattga
     1861 agtataagaa aagcattggc aatgtcgatc tctacgcgtc ttatctgttc agcgacgatt
     1921 ataatgccaa taacggcctg aattacaaac gtaaaggcgg cggttcttta ggcgcggatt
     1981 accatctcac cgacgatctg acctggggga cggcatggaa ctatacccgt gcggagatgc
     2041 gcggcaacgg caataaaact tacgatcaaa atattgtcgg taccgcgtta agctggacgc
     2101 cggaaaactg gactattgcc gcaggcggcg gttggtatca gaactttatg acgaccaaaa
     2161 aagtgtctgt gaatgattac tttgccggcg atgcgtgggg tctggaatat tttgtcggtt
     2221 acgctttccc gattggtcag tatgccgtga aagctattca accgtacttt atgggcgacc
     2281 gcattgaata tgtgaatggc cgcgactatc tgcgcaccga taacggcgtg gggatcacct
     2341 tccaactgga ttatggtttc cgcgttgatt atgaacatgt tttcacctcc agcactgaca
     2401 atctgggcga tatgaacctg gtgcgtctgc gttacgattt ctaaagcgtt ttcctgtgcc
     2461 ggatgttggc gttaagacgt cttatccggc atttcccttt acgccattcc cgcctgacac
     2521 acgcctgagc gcctgcctcg tacatttaac gacacaccag gaaacatcat gaaataattt
     2581 caaggacagc aggctgtgat ctgtgtcatg ttaagaaata gcctttcgtt tgggccaaaa
     2641 cagacgatgc cgcatgaacg gcatccggca cagcatcaca ctatttaaaa tggagaaatt
     2701 atgggattgc gtcagagttt acgcattgcg gccagcacgc tattactggc ctgcggatta
     2761 cagtttgccc atgccgatgg ttccccgcaa acgatcgtat ttggcgtcgc gccagggccg
     2821 tatggcgaca tggtgaagca ggcgattgcg ccgacattaa aagaaaaagg gtataaggtc
     2881 gtggtgcgcg agtttagcga ctatgtccag cccaatatgg cgttagctaa cggcagcatc
     2941 gacgccaacc tctttcaaca taccctctat tttgacaaat tcaccgctga caaagggctg
     3001 aagctcagca aacttattgt ggtaccgacc gccgggatgg gcttctattc acgtaaaatc
     3061 aacagcctgg atgcgcttaa aaaaggggac attattaccc tctccaacga tccgaccaac
     3121 ctggcgcgcg gccttcgctt cctgcaatcg ttggggctta tcacgattaa gcacaatatc
     3181 gatccgacca aagcctctga acgagatatc gccagcaatc caaaaggact ggttttcaaa
     3241 ccgctggaag ccgcacagct accgcgcacg ctggacggcg tgaccggcgc gctggttaac
     3301 gggaactttg cggtggcggc aggactcgat ctctccagcg cgattaagca ggaacacctg
     3361 gatgagaatc tgaaaaatat cattgcggta cgcagtgaag atgccgataa gccgtttgcc
     3421 aaagatattg tcgaggcggt gaaatcgccg gcttatcgcg cggtcatcga cgatccaaag
     3481 aatatttata gcgccttcca gaaaccggaa tggatgaccg cgacaccctg atcgcagcgg
     3541 tggccatccc caatttctga ggtgaatatg attgaaatag aaaaagtctg cgtcgatttt
     3601 accgccggtc gcggtacccc cacgcgcgcg gtggatgatg tgagcctgca tatcgccgcg
     3661 ggcgagattt ttggcattgt cggtaccagc ggcgcaggaa aaagcactct gctgcgtacc
     3721 ctgaacgcct taacgcgtcc cagtcagggg cgcgtcaacg tcaacggcgt ggaaatttct
     3781 gcgctggacg gaaaagcgtt acgccaggcg cggcagcgta ttggtatgat tttccagcat
     3841 tttaacttaa tgcatacccg gacagtggcg aaaaacgtgg cgtttagcct gaaagcggct
     3901 ggctgggaac gcagcaaaat cgcgccgcgg gtggcggaaa ttttaacgct ggtgggcctt
     3961 gccgataaag cgaactgttt tccggtacag ctcagcggcg ggcaaaaaca gcgggtgggg
     4021 atagcccgcg ccatcgctaa ccatccggat gttttgctgt gtgacgaacc gacttccgct
     4081 ctggatctgg aaacttccgc cacgattctg gccctgctca gacagatcaa cgcgcagctc
     4141 gggattacta ttgtgctgat cacccatgaa atgaacgtga tcaaatctat ttgcgatcgc
     4201 gtggcggtga tgtcgggcgg taaggttgtg gaatcgggcg aggtgtttga tgtgtttgcc
     4261 cacccgcaac acgctttcac acagcaactg gtgtctcata cccttaattt gaccctgccg
     4321 gaacgcttac gggaacacct gcccgggcag ttgctgaaaa ttttgtttat cggcgattcg
     4381 gcggagcagc cggtactgtc ggaggtggcg atcaagtttg gcgtcgcggt caatatcctg
     4441 catggcaaga ttgagtatat cggcgaacgc gcgttgggca ttctggtggt gcaattaacc
     4501 gcgccgcata atccaacggc ggtggcggcc gccgtggagc atatccgtca acgtactgca
     4561 caggtggagg tgatccgtgg atgatttatt gccggattta acgctggcgt tcaatgaaac
     4621 tttccagatg ttgagtattt caacggtgct ggcgattctt ggcggtctac cgctcggttt
     4681 tctgattttt gtcaccgatc gtcatctgtt ctggcagaac cgttttattt atcttgtcgc
     4741 ctcggttctg gtgaatatta tccgctcggt gccatttgtt attttactgg tgctgttact
     4801 gccgctaacg cagcttttgc tgggcaatac gataggcccg attgcagcct ccgtcccgct
     4861 gtcggtggcc gcaatcgcgt tttatgcacg cctggtagat agcgcgctcc gtgaagtcga
     4921 taaagggatt attgaggcgg cgctggcatt cggcgctagt ccgatgcgta ttatctgtac
     4981 cgtactgttg ccggaagcca gcgcagggct gctgcgcggc ctgacgatta cgctggtaag
     5041 cttaatcggc tactcggcga tggccgggat tgtcggcggc ggcggggtag gcgacctggc
     5101 gattcgctat ggctactacc gttacgaaac cgaagtgatg gttgttaccg tagtggcgct
     5161 gattgtgctg gttcaggtcg ttcagatgct gggcgactgg ctggcaaaac gtgccgacaa
     5221 gcgcgacaga cactaagccg gctcaatgta gcgtcagccg gcaataaaaa taagctattg
     5281 cgcttttagc cagttggcaa cgtcttgcca tgtgccgcga aaaacgatat tcgcggcttt
     5341 tttctccagt tgatagcgat acattgggtc gtaatattcg ttaagtagcg gaaccagcca
     5401 tgccatatgg ccgtcggtgc tgccgctgga taattgctct gccagcgccc tatccagcgt
     5461 gtccgtcagt tcggcaaagc gttgcaaccc cagacggcgg cgaatagcga acagtccatg
     5521 atgaagatat tcactatatg cctgccaacc ggccccatcg ccgtaggcgt gggtgaagtc
     5581 gtgatgcata cggatgaaat actcttcacg cagtcgttcc agacgaagcg caaacggatc
     5641 ttccactacc gcaatggggg cttgcgccat tctttcgcgt aaacactcag gcagatggtt
     5701 ggcgccgatc gttcgccctt catcttccag tacccacctt tttagcgtct gacgcgcgtt
     5761 aattttcagc aattcaacgg caagtttgtt ttcaaaactg gcctggctga gctggggttt
     5821 cagcgtgcgg ccaaaagagg agccgcgatg acgcgcgaga ccttccagat ccacgccgtt
     5881 gggctgttgt cgtaccagtt gcgttttgcc gctgcccgta cagccgccaa ttaaaagtat
     5941 cggtttttgc gccagttgcc aggtcgcctg aattgctgtc tggcgcagcg ctttatagcc
     6001 gccttcaata agcgggcagt caatccctgt ttcttgcagc caacgttgta cgatatgtga
     6061 ccgctgaccg ccgcgtgcgc agcacagata cccgttgggg aaacgttgat acgcggcttt
     6121 ccaggcctca agccgctgct ggcgaatgtc gccgcaaacc agccgatgcc ccagcgctaa
     6181 cgccgcatcc gcgccctgac gttt
//
LOCUS       DAGWFR010000204         6160 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.207, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000204 DAGWFR010000000
VERSION     DAGWFR010000204.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 6160)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6160)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6160
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.207"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..382
                     /locus_tag="MOX77_004076"
     CDS             <1..382
                     /locus_tag="MOX77_004076"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="acetolactate synthase large subunit"
                     /protein_id="HCA3359473.1"
                     /translation="KVLCFSGDGSLMMNIQEMATASENQLDVKIILMNNDALGLVHQQ
                     QSLFYKQGVFAATYPGSINFMQIAAGFGLDTCDLNNEADPQAALQAIIRRPGPALIHV
                     RIDAEEKVYPMVPPGAANTEMVGE"
     gene            386..676
                     /gene="ilvN"
                     /locus_tag="MOX77_004077"
     CDS             386..676
                     /gene="ilvN"
                     /locus_tag="MOX77_004077"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HCA3359474.1"
                     /translation="MQKQSHDNVILELTVRNHPGVMTHVCGLFARRAFNVEGILCLPI
                     QGSDQSRIWLLVNDDQRLEQMISQIDKLEDVAKVVRNQSDPTMFNKIAVFFE"
     gene            complement(678..1463)
                     /locus_tag="MOX77_004078"
     CDS             complement(678..1463)
                     /locus_tag="MOX77_004078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR family transcriptional regulator"
                     /protein_id="HCA3359475.1"
                     /translation="METKQKERIRRLMELLKKTDRIHLKDAARMLEVSVMTIRRDLSQ
                     DDDPLPLTLLGGYIVMVNKPASSTNMPLPAKKTHHRDDLPVAILAAGLVRENDLVFFD
                     NGPEMPLVISMIPDDITFTGICYSHRVFIALNEKPNATAILCGGTYRAKSDAFYDANN
                     PSALDSLNPRKVFISASGVHEHFGVSWFNPDDLAAKRKAMERGLRKILLARHALFDEV
                     APASIGPLSAFDVLISDRPLPTDYAVHCRNGSVKVITPDSESE"
     gene            1777..2697
                     /gene="rbsK"
                     /locus_tag="MOX77_004079"
     CDS             1777..2697
                     /gene="rbsK"
                     /locus_tag="MOX77_004079"
                     /EC_number="2.7.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribokinase"
                     /protein_id="HCA3359476.1"
                     /translation="MDIAVIGSNMVDLITYTNQMPKEGETLEAPAFKIGCGGKGANQA
                     VAAAKLNSKVLMLTKVGDDIFADNTIRNLESWGINTTYVEKVPCTSSGVAPIFVNANS
                     SNSILIIKGANKFLSPEDIDRAAEDLKKCQLIVLQLEVQLETVYHAIEFGKKHGIEVL
                     LNPAPALRELDMSYACKCDFFVPNETELEILTGMPVDTYDHIRAAARSLVDKGLNNII
                     VTMGEKGALWMTRDQEVHVPAFRVNAVDTSGAGDAFIGCFAHYYVQSGDVEAAMKKAV
                     LFAAFSVTGKGTQSSYPSIEQFNEYLSLNE"
     gene            2728..4044
                     /gene="fucP"
                     /locus_tag="MOX77_004080"
     CDS             2728..4044
                     /gene="fucP"
                     /locus_tag="MOX77_004080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose:H+ symporter permease"
                     /protein_id="HCA3359477.1"
                     /translation="MNDKNIVQMPDGYLNKTPLFQFILLSCLFPLWGCAAALNDILIT
                     QFKSVFSLSNFASALVQSAFYGGYFLIAIPASLVIKKTSYKVAILIGLTLYIVGCTLF
                     FPASHMATYTMFLAAIFAIAIGLSFLETAANTYSSMIGPKAYATLRLNISQTFYPIGA
                     AAGILLGKYLVFSEGESLEKQMAGMNAEQVHNFKVLMLENTLEPYKYMIMVLVVVMVL
                     FLLTRFPTCKVAQTASHKRPSALDTLRYLASNARFRRGIVAQFLYVGMQVAVWSFTIR
                     LALELGDINERDASTFMVYSFACFFIGKFIANILMTRFNPEKVLILYSVIGALFLAYV
                     ALAPSFSAVYVAVLVSVLFGPCWATIYAGTLDTVDNEHTEMAGAVIVMAIVGAAVVPA
                     IQGYVADMFHSLQLSFLVSMLCFVYVGVYFWRESKVRGNLAEVAAS"
     gene            4056..5069
                     /locus_tag="MOX77_004081"
     CDS             4056..5069
                     /locus_tag="MOX77_004081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldose 1-epimerase family protein"
                     /protein_id="HCA3359478.1"
                     /translation="MTTRITLWRELFSEQPRILLENDDFTVTAFRYASGVEGLKIQNS
                     RGHLVILPWMGQMIWDVQFDGHDLTMRNMFRQPKPAAEVVATYGCFAFHSGLLANGCP
                     SPEDTHPLHGEMPCAAMDDAWLELEGDSLRVTGRYEYVMGFGHHYQAQPAVVMRKSSA
                     LFDIQMTVTNLASVAMPLQYMCHMNYAYVPNATFRQNIPDTALKLRESVPAHVKPTAQ
                     WLAFNQRLLQGEASLATLNEPGFYDPEIVFFADELDKYTDTPEFSMIAPDGTTFVTRF
                     ASAELNYVTRWILYNGDQQVAAFALPATCRPEGFLAAQRNGTLLQLEPQQTRTFTVTT
                     GIV"
     gene            5223..5813
                     /gene="uhpA"
                     /locus_tag="MOX77_004082"
     CDS             5223..5813
                     /gene="uhpA"
                     /locus_tag="MOX77_004082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator UhpA"
                     /protein_id="HCA3359479.1"
                     /translation="MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLP
                     GRGVQVCICDISMPDISGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKR
                     CSPDELIAAVHTVATGGCYLTPDIAVKLAAGRQDPLTKRERQVEEKLAQGMAVKEIAA
                     ELGLSPKMVHVHRANLLEKLGVSNDVELAHRMFDGW"
     gene            5813..>6160
                     /locus_tag="MOX77_004083"
     CDS             5813..>6160
                     /locus_tag="MOX77_004083"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462688.1"
                     /note="Member of the two-component regulatory system
                     UhpB/UhpA involved in the regulation of the uptake of
                     hexose ph; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     UhpB"
                     /protein_id="HCA3359480.1"
                     /translation="MNTFFSRLITVVACFFIFSAAWFCLWSISLHLVERPELAALLFP
                     FGLRLGLMLQCPRGYWPVLLGAEWLLVYWLAQEVALAHLPLLMIGGVLTLLPVALTSR
                     YRHQRDWRTLLLQG"
BASE COUNT         1401 a         1543 c         1691 g         1525 t
ORIGIN      
        1 caaggtgctg tgtttttccg gcgacggtag tttgatgatg aatattcagg agatggctac
       61 cgccagcgaa aaccagttgg atgtgaaaat catcctgatg aataacgacg cgctgggact
      121 ggtgcatcag caacagagtc tgttctataa acagggcgtt tttgcggcaa cctatccggg
      181 aagcatcaac tttatgcaga ttgccgccgg gtttggtctg gacacctgtg atttgaataa
      241 cgaagccgat ccacaggcgg cgttgcaggc tatcattcgt cgtcctggac cggcgttgat
      301 ccacgtgcgc attgatgcag aagaaaaagt gtatccgatg gtgccgccgg gtgcggcaaa
      361 tacagagatg gtgggggaat aagccatgca gaaacaatca catgataacg ttattctgga
      421 gctgaccgtt cgcaaccatc ctggcgtgat gacccacgtc tgcgggctgt tcgcccgacg
      481 cgctttcaac gttgagggta ttctctgttt accgattcag ggtagcgatc agagccgcat
      541 ctggcttctg gtcaatgacg atcagcggct tgaacagatg ataagtcaga tcgataaact
      601 ggaagacgtg gcgaaggtgg tacgaaacca gtccgatccc accatgttca ataaaattgc
      661 cgtctttttt gagtaagtta ttcactttcc gaatcaggcg tgatgacttt gacggaacca
      721 ttccgacagt gaacggcata atctgtcggt aatgggcgat cgctaatcag gacatcaaag
      781 gcagaaagcg gaccaatgct ggcaggcgcg acctcatcaa acagggcgtg acgcgccagc
      841 aaaattttgc gcagaccgcg ctccatcgct ttacgtttgg cggcaagatc atccgggtta
      901 aaccagctca cgccaaaatg ttcatgtacg ccgctggcgg aaataaacac tttgcgcgga
      961 ttaagcgaat ccagcgccga aggattattg gcatcataaa aggcatcgct cttggcccga
     1021 taggtgccgc cgcacagaat cgctgtggca ttaggctttt cattcagcgc gataaatacc
     1081 cgatgcgagt agcaaatccc ggtaaaggta atatcatccg gtatcatgct gatgactaat
     1141 ggcatttccg gaccgttatc aaaaaaaacc agatcgtttt cacgcaccag gccggcggcc
     1201 aagatcgcaa cgggaaggtc gtcccgatga tgcgtctttt tcgccggcag cggcatattg
     1261 gttgaagacg caggcttatt taccatgacg atatagccgc cgagcagcgt cagcggtaaa
     1321 gggtcatcat cctggctgag atcgcggcga atggtcatca ccgaaacttc cagcatccgc
     1381 gcggcgtctt tcagatggat tcgatcggtc tttttcagta actccatcaa gcgtcggata
     1441 cgttcttttt gcttggtctc cattcaccct ctccgcaaat catgttgtta tgttccatca
     1501 gtaacattta tgtgtttctg agaacattac agtgtggcac tactatacgt ctggccgtca
     1561 ggaaataaaa gtgggtttat tcgcgtttta taacaataaa tagttaattt tcagtaaatt
     1621 gtaaccctaa aaatgatttg ttccgccagg ggttgttcac gaagtaaatg gcaaaatgat
     1681 cctctaatcg cgatcatagt cacaaatgat acggaagtaa catgataatg ttattttaat
     1741 atcattgtcg tgtgacgatt tctgagaggg agtaaaatgg atatcgcggt tattggctct
     1801 aacatggtgg accttatcac ctacaccaac cagatgccca aagaagggga aactctggaa
     1861 gcgccggcgt ttaaaatcgg ctgcggcgga aaaggggcga accaggccgt ggcggccgct
     1921 aagctcaatt caaaagtatt gatgttgacc aaagtgggcg acgatatttt tgccgacaac
     1981 accattcgta atctcgaatc ctgggggatc aatacgacgt atgtagaaaa agtaccgtgt
     2041 accagcagcg gcgtagcgcc gattttcgtc aacgccaact ccagcaacag cattctgatc
     2101 atcaaaggcg ctaacaagtt tctctcgccg gaagatatcg atcgcgcggc ggaagattta
     2161 aaaaaatgcc agcttattgt tctgcaactg gaagttcagc ttgaaacggt ttatcacgca
     2221 atagaatttg gcaagaaaca cgggattgaa gtgttattaa accctgcgcc agcattacgg
     2281 gaattagata tgtcttatgc ctgtaaatgc gatttctttg tacctaatga aaccgagctg
     2341 gaaatattaa ccggtatgcc agtggatacc tatgaccata ttcgcgcagc ggcacgttcg
     2401 ctggtagata aagggctgaa caatattatt gtcaccatgg gcgagaaagg cgcgctgtgg
     2461 atgacgcgtg accaggaagt ccatgttccg gcgtttagag tgaacgctgt tgataccagc
     2521 ggcgcgggcg atgcctttat cggctgtttc gcgcattact acgtccagag cggggatgtg
     2581 gaagccgcca tgaaaaaagc cgtcctcttt gccgctttca gcgtcaccgg gaaaggcacc
     2641 caatcctctt atccaagcat tgagcaattt aatgagtatc tttcgttgaa cgaataacaa
     2701 tcaccctgca ctgttaaagg tagcactatg aacgataaaa acatcgttca gatgcccgac
     2761 gggtatctga ataagacacc tctgttccag tttattttgt tatcctgttt attcccgtta
     2821 tggggatgcg cagccgcgtt aaatgatatt ctgattacgc aatttaaaag tgtattttcg
     2881 ctgagcaact ttgcttcggc attagtacaa agcgcctttt atggcggtta ttttttaatt
     2941 gctattccgg cctcgctggt cattaaaaaa accagttata aagtggcgat acttatcggc
     3001 ctgacgctat acattgtcgg ctgtacgctc ttttttccgg cgtcgcacat ggcgacctac
     3061 accatgttcc tcgcggcgat tttcgccatt gcgattggcc tgagtttcct ggaaacggcg
     3121 gcgaatacct acagttcgat gatcgggccg aaagcctacg ccacgctgcg gctgaatatc
     3181 agccagacct tttatccgat cggcgcggcg gcaggcattt tattgggtaa gtatctggtc
     3241 ttttccgaag gggaaagcct ggaaaaacag atggcgggca tgaatgccga gcaagtccac
     3301 aacttcaagg tgttgatgct ggaaaacact ctggaaccct ataagtacat gattatggtt
     3361 ctggtagtgg tgatggtact gttcctgctg acgcgttttc cgacctgtaa agttgcgcaa
     3421 accgcgagtc ataaacgtcc ctcggcgctg gatacgctac gctatctcgc cagtaacgcc
     3481 cgcttccgtc gcggtattgt ggcgcagttc ctgtatgtgg gaatgcaggt ggcggtctgg
     3541 tcgttcacta ttcgtctggc gctggagtta ggcgatatca atgagcgcga tgcctcaacc
     3601 tttatggtct acagcttcgc ctgctttttt atcggcaagt ttatcgccaa cattctgatg
     3661 acgcgcttca acccggaaaa agtcctgatc ctttactctg tgatcggcgc gctgttcctg
     3721 gcctatgtgg cgctggcgcc cagctttagc gcggtatacg tggcggtgct ggtcagtgtt
     3781 ctgtttggcc cctgctgggc gaccatttat gccggaacgc tcgataccgt cgataacgag
     3841 cataccgaaa tggcgggggc ggtcatcgtg atggcgattg tcggcgcggc ggtggttccc
     3901 gcgattcagg gctacgtggc ggacatgttc cactcgttac agctctcatt cctggtttcc
     3961 atgctgtgct ttgtttacgt tggcgtttac ttctggcgcg aaagcaaagt gcgcggcaac
     4021 ctggctgaag tcgccgcgtc ctgaggagat caaccatgac aacacgtatt acattatggc
     4081 gggagctttt tagcgagcag ccgcgtatct tgctggaaaa tgacgatttt acggttacgg
     4141 cgtttcgtta cgccagcggc gtggaaggac tgaaaataca aaacagccgc ggtcatctgg
     4201 tgattctgcc ctggatgggg cagatgattt gggacgtgca gtttgacggt catgatctga
     4261 ctatgcgcaa catgttccgc cagccgaagc cggctgcgga agtggtggca acgtatggtt
     4321 gctttgcttt ccattccgga ctattggcga atggctgccc gtcgccggaa gatacacatc
     4381 cgctgcacgg cgagatgccc tgcgctgcta tggacgacgc ctggctggag ttagagggcg
     4441 acagtctgcg cgtgaccggg cgctacgagt atgtgatggg gttcggtcat cattatcagg
     4501 cgcaacctgc ggtggtaatg cgtaaatcaa gcgcgctgtt tgatattcag atgaccgtga
     4561 ctaacctggc ttcagtcgcc atgccgctac agtacatgtg ccacatgaac tatgcctatg
     4621 tgccgaacgc cacgttccgc cagaatatcc cggataccgc gctgaagcta cgcgagtcgg
     4681 tgccagcgca tgtcaaaccc acggcgcagt ggctggcgtt taatcaacga cttttgcagg
     4741 gtgaagcctc gctggcaacg ctcaacgagc ctggctttta cgacccggaa atcgtgttct
     4801 tcgccgatga actggacaag tacacggata ccccggaatt cagtatgatc gccccggatg
     4861 gcaccacgtt cgtgacacgt ttcgccagcg cggagctgaa ttacgtgacc cgctggattc
     4921 tttataacgg cgatcagcag gttgccgcct ttgccctgcc cgcgacctgt cggcctgaag
     4981 gttttctcgc ggcgcagcga aatggaacct tgcttcaact ggaaccgcag caaacccgga
     5041 cgttcaccgt cacgacaggc attgtctgac cgctcaaggc ttgaacaccc aggcacttat
     5101 cgttaaggta agtgcttttg ccggatggcg gcattaatgc cttatccggc ctacaacggc
     5161 acctgcccgt aggcctgata agcgcagcgc catcaggcat gtcttagcgc caggatgaac
     5221 ccatgattac cgttgccctt atcgacgacc accttatcgt ccgctccggc tttgcacagc
     5281 tactggggct ggaacccgat ttgcaggtgg tcgccgagtt tggttccggg cgcgaagcgt
     5341 tggcaggctt gccggggcgc ggcgtacagg tgtgtatctg cgatatctcg atgccggata
     5401 tttccggact ggagctgcta agccaactgc caaaagggat ggcgacgatc atgctctcgg
     5461 ttcacgatag cccggcgctg gtggaacagg cgttgaacgc cggcgcgcgc ggttttctct
     5521 ctaaacgctg tagtccggat gagctgatcg ccgcggtgca tacggtggcg acgggcggct
     5581 gctatttgac ccccgatatt gccgtgaaac tggcggcggg tcggcaagat ccgctgacca
     5641 aacgcgagcg tcaggtggag gaaaaactcg cccagggtat ggcggtaaaa gagattgccg
     5701 ccgagctggg gctgtcgcca aaaatggtgc atgtccatcg cgcgaatctg ctggaaaaat
     5761 taggcgtcag caatgacgtt gaactggcgc atcgcatgtt tgacggttgg taatgaacac
     5821 ctttttttcc cgtttaatca ccgttgttgc ctgctttttt atcttctccg ccgcgtggtt
     5881 ctgcctgtgg agcatcagcc tgcatctggt agagcgcccg gagctggcgg cgctactctt
     5941 tcccttcggc ctgcgcctgg gacttatgct gcaatgcccg cgcggatact ggccagtatt
     6001 gctgggcgcg gagtggctgc tggtgtactg gttggcgcag gaagttgcgc tggcccatct
     6061 gccgcttttg atgatcggtg gtgtgttgac gctactgccc gtggcgctga cttctcgtta
     6121 ccgccatcag cgcgactggc gcacgttatt gcttcagggc
//
LOCUS       DAGWFR010000205         6124 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.208, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000205 DAGWFR010000000
VERSION     DAGWFR010000205.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 6124)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6124)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6124
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.208"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(72..1025)
                     /gene="flgL"
                     /locus_tag="MOX77_004084"
     CDS             complement(72..1025)
                     /gene="flgL"
                     /locus_tag="MOX77_004084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgL"
                     /protein_id="HCA3359481.1"
                     /translation="MRISTQMMYEQNMSGITNSQAEWMKLGEQMSTGKRVTNPSDDPI
                     AASQAVVLFQAQAQNSQYALARTFATQKVSLEESVLSQVTTAIQTAQEKIVYAGNGTL
                     SDDDRASLATDLQGIRDQLMNLANSTDGNGRYIFAGYKTEAAPFDQATGGYHGGEKSV
                     TQQVDSARTMVIGHTGAQIFNSITSNAVPEPDGSDSEKNLFVMLDTAIAALKTPVEGN
                     DVEKEKAAAAIDKTNRGLKNSLNNVLTVRAELGTQLSELSTLDSLGSDRALGQKLQMS
                     NLVDVDWNSVISSYVMQQAALQASYKTFTDMQGMSLFQLNR"
     gene            complement(1040..2701)
                     /gene="flgK"
                     /locus_tag="MOX77_004085"
     CDS             complement(1040..2701)
                     /gene="flgK"
                     /locus_tag="MOX77_004085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgK"
                     /protein_id="HCA3359482.1"
                     /translation="MSSLINHAMSGLNAAQAALNTVSNNINNYNVAGYTRQTTILAQA
                     NSTLGAGGWIGNGVYVSGVQREYDAFITNQLRGAQNQSSGLTTRYEQMSKIDNLLADK
                     SSSLSGSLQSFFTSLQTLVSNAEDPAARQALIGKAEGLVNQFKTTDQYLRDQDKQVNI
                     AIGSSVAQINNYAKQIANLNDQISRMTGVGAGASPNDLLDQRDQLVSELNKIVGVEVS
                     VQDGGTYNLTMANGYTLVQGSTARQLAAVPSSADPTRTTVAYVDEAAGNIEIPEKLLN
                     TGSLGGLLTFRSQDLDQTRNTLGQLALAFADAFNAQHTKGYDADGNKGKDFFSIGSPV
                     VYSNSNNADKTVSLTAKVVDSTKVQATDYKIVFDGTDWQVTRTADNTTFTATKDADGK
                     LEIDGLKVTVGTGAQKNDSFLLKPVSNAIVDMNVKVTNEAEIAMASESKLDPDVDTGD
                     SDNRNGQALLDLQNSNVVGGNKTFNDAYATLVSDVGNKTSTLKTSSTTQANVVKQLYK
                     QQQSVSGVNLDEEYGNLQRYQQYYLANAQVLQTANALFDALLNIR"
     gene            complement(2766..3716)
                     /gene="flgJ"
                     /locus_tag="MOX77_004086"
     CDS             complement(2766..3716)
                     /gene="flgJ"
                     /locus_tag="MOX77_004086"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly peptidoglycan hydrolase FlgJ"
                     /protein_id="HCA3359483.1"
                     /translation="MIGDGKLLASAAWDAQSLNELKAKAGQDPAANIRPVARQVEGMF
                     VQMMLKSMREALPKDGLFSSDQTRLYTSMYDQQIAQQMTAGKGLGLADMMVKQMTGGQ
                     TMPADDAPQVPLKFSLETVNSYQNQALTQLVRKAIPKTPDSSDAPLSGDSKDFLARLS
                     LPARLASEQSGVPHHLILAQAALESGWGQRQILRENGEPSYNVFGVKATASWKGPVTE
                     ITTTEYENGEAKKVKAKFRVYSSYLEALSDYVALLTRNPRYAAVTTAATAEQGAVALQ
                     NAGYATDPNYARKLASMIQQLKAMSEKVSKTYSANLDNLF"
     gene            complement(3716..4813)
                     /locus_tag="MOX77_004087"
     CDS             complement(3716..4813)
                     /locus_tag="MOX77_004087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring protein FlgI"
                     /protein_id="HCA3359484.1"
                     /translation="MFKALAGIVLALVATLAHAERIRDLTSVQGVRENSLIGYGLVVG
                     LDGTGDQTTQTPFTTQTLNNMLSQLGITVPTGTNMQLKNVAAVMVTASYPPFARQGQT
                     IDVVVSSMGNAKSLRGGTLLMTPLKGVDSQVYALAQGNILVGGAGASAGGSSVQVNQL
                     NGGRITNGAIIERELPTQFGAGNTINLQLNDEDFTMAQQITDAINRARGYGSATALDA
                     RTVQVRVPSGNSSQVRFLADIQNMEVNVTPQDAKVVINSRTGSVVMNREVTLDSCAVA
                     QGNLSVTVNRQLNVNQPNTPFGGGQTVVTPQTQIDLRQSGGSLQSVRSSANLNSVVRA
                     LNALGATPMDLMSILQSMQSAGCLRAKLEII"
     gene            complement(4825..5523)
                     /gene="flgH"
                     /locus_tag="MOX77_004088"
     CDS             complement(4825..5523)
                     /gene="flgH"
                     /locus_tag="MOX77_004088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body L-ring protein FlgH"
                     /protein_id="HCA3359485.1"
                     /translation="MQKYALHAYPVMALMVATLTGCAWIPAKPLVQGATTAQPIPGPV
                     PVANGSIFQSAQPINYGYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKT
                     SFGFDTVPRYLQGLFGNSRADMEASGGNSFNGKGGANASNTFSGTLTVTVDQVLANGN
                     LHVVGEKQIAINQGTEFIRFSGVVNPRTISGSNSVPSTQVADARIEYVGNGYINEAQN
                     MGWLQRFFLNLSPM"
     gene            complement(5578..>6124)
                     /gene="flgG"
                     /locus_tag="MOX77_004089"
     CDS             complement(5578..>6124)
                     /gene="flgG"
                     /locus_tag="MOX77_004089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006819466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="flagellar basal-body rod protein FlgG"
                     /protein_id="HCA3359486.1"
                     /translation="LHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGTSAYTRDGSFQVD
                     QNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMND
                     TGLESIGENLYIETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRA
                     YEINSKAVSTTDQMLQKLTQL"
BASE COUNT         1228 a         1782 c         1566 g         1548 t
ORIGIN      
        1 gcccgcgccg gggtggatgg cgcgggcaga caaaacatat ccagtttcgt gatatgtttc
       61 aaaaagaggc gttaccggtt caactggaaa agcgacattc cctgcatgtc ggtaaacgtt
      121 ttataggacg cctgtaatgc cgcctgttgc atgacgtagg aggaaatgac cgagttccag
      181 tccacatcta ccaggttgct catctgtagc ttctgtccca gcgcacggtc gcttcccagt
      241 gaatccagcg tactgagttc gctcagttgc gttcccagtt ccgcacgaac ggtcaggacg
      301 ttattaagcg aattttttaa gccgcgattg gttttatcaa tggcggcagc ggctttttct
      361 ttttccacgt cattgccttc caccggggtc ttgagcgcgg caattgccgt atcgagcatg
      421 acaaacagat tcttttcgga gtccgagcca tccggttccg gcaccgcatt gctggtgatg
      481 ctattaaaaa tttgcgctcc cgtatggcca attaccatcg tgcgtgcgga atccacctgc
      541 tgggtaacac ttttctcgcc gccatgataa ccacctgtcg cctggtcgaa tggcgccgct
      601 tccgttttat acccggcaaa gatatagcga ccattgccgt cagtgctgtt tgccaggttc
      661 atcagctgat cgcggatccc ctgtaaatcc gtcgccagcg acgcgcggtc atcgtcgctt
      721 aacgtgccgt ttccggcata gacgattttt tcctgcgcgg tttgaatcgc cgtcgtcacc
      781 tgactgagta cgctttcttc cagcgacact ttttgggtgg caaacgtacg cgccagggcg
      841 tactggctat tctgcgcctg cgcctgaaag agtactaccg cctgcgacgc ggcgatcgga
      901 tcgtcagatg ggttggtaac gcgcttaccg gtagacatct gctcgcccag cttcatccat
      961 tcggcctgag aattagtgat gccgctcata ttttgttcgt acatcatctg ggtactgata
     1021 cgcatgtcat ccttctcctt tagcgaatat tcaataacgc atcaaacagc gcattcgcgg
     1081 tctgcaatac ttgcgcattc gccagataat actgctgata acgctgcaaa ttgccgtact
     1141 cttcgtcgag gttaacgccg gaaaccgact gttgctgttt ataaagctgt ttaaccacat
     1201 tcgcctgcgt ggtgctgctg gttttcagcg ttgacgtttt gttacccaca tcgctgacca
     1261 acgtggcgta agcatcgtta aaggttttgt tgccgcccac tacattgctg ttttgtaagt
     1321 ccagcaatgc ctgaccattg cggttatcgc tgtcgccggt atccacatca ggatcgagtt
     1381 ttgactcaga cgccatcgca atctcggctt catttgtcac tttaacgttc atgtcgacga
     1441 tagcattgct gaccggcttg agaagaaaac tgtcgttttt ctgtgcgcca gtccctaccg
     1501 tcactttcag accgtcaatc tccagttttc cgtcagcatc ttttgttgcc gtgaaggtgg
     1561 tgttatccgc agtgcgagta acctgccagt ctgtaccgtc aaaaacaatc ttataatccg
     1621 tcgcctgaac cttcgtgctg tcgaccacct tagcggttag cgataccgtt ttatcggcat
     1681 tattactgtt gctatatacc accggcgagc caatgctaaa gaagtctttc cctttattgc
     1741 cgtcggcgtc ataacctttg gtatgctgcg cgttaaacgc atcggcaaac gccaacgcca
     1801 actggcccag cgtattacga gtctgatcca gatcctgaga acggaacgtc agtagcccgc
     1861 cgagcgaacc ggtgttcagc aacttttccg gaatttcgat gttaccggcg gcctcatcga
     1921 cataagcgac agtcgttcgc gtcgggtcgg cgctggaggg aaccgccgcc aactgacgcg
     1981 ccgtcgaccc ctgcaccagc gtatagccat tggccatcgt caggttatag gtgccgccgt
     2041 cctgtacact cacctcgacg ccaacgatct tgttaagctc gctaaccaac tgatcacgtt
     2101 gatcgagcag gtcgttcggc gatgcgcccg cgcctacgcc cgtcatacgg gagatttgat
     2161 cgttcaggtt agctatctgc ttcgcgtaat tgttgatttg cgccacgctg gagccaatcg
     2221 cgatattgac ctgtttatcc tgatcgcgca gatactgatc ggtggttttg aactggttta
     2281 ccagcccttc cgctttacca atcagcgcct gacgcgccgc aggatcttcc gcattactga
     2341 ctaacgtttg caggctggta aaaaaactct gcagcgagcc agacagtgag ctggatttat
     2401 cggccagcag gttgtcgatt ttcgacattt gttcatagcg cgtggttaag ccgctgctct
     2461 ggttttgcgc gccgcgtagc tgattagtga taaacgcatc atattcgcgc tgtacgcctg
     2521 aaacgtaaac gccattacct atccagccgc cagcccctaa cgtactgttt gcctgcgcca
     2581 gaatagttgt ctgccgggta taacccgcaa cgttataatt gttgatgtta ttactgaccg
     2641 tatttaacgc ggcctgcgcg gcgttaagtc cgctcatggc gtgattaatc aagctggaca
     2701 tgatggttcc ttttaatcct tcaatactcg ttgttatcgg cagcgactac gtggacttga
     2761 gcaatttaaa agagattgtc gagattcgcg ctgtaggttt tgctgacctt ttcactcatc
     2821 gctttcaact gctgaatcat gctggccaat ttacgcgcgt aattcgggtc agtggcgtat
     2881 ccggcgtttt gcagagccac tgcgccctgc tctgccgtgg cggcagtggt cacggcagcg
     2941 tagcgtgggt tacgcgttaa cagcgcgaca taatccgata acgcctccag atacgagcta
     3001 tagacgcgga atttcgcttt cacttttttc gcttcgccat tttcgtattc agtggtggtg
     3061 atttccgtca ccggcccttt ccaactggcg gtcgctttca cgccaaatac gttatagctg
     3121 ggttcgccat tctcccgcag gatttgccgc tgcccccagc cggactccag cgccgcctgc
     3181 gccagaatca gatgatgcgg caccccgctt tgttcgctgg ccagcctcgc cgggagcgaa
     3241 agccgggcca gaaagtcttt actgtcgccg gagagcggcg catcgctgct gtccggcgtt
     3301 ttcggtatgg ctttgcgcac cagttgggtc agcgcctgat tttgatagct gtttaccgtc
     3361 tccagggaga atttaagcgg tacttgcggc gcatcatctg caggcatcgt ctgcccgccc
     3421 gtcatctgtt taaccatcat atccgccagc cccaatccct taccggcggt catctgctgg
     3481 gcgatctgct ggtcatacat gctggtatac agacgcgtct gatcgctgct gaataaacca
     3541 tctttgggta aagcctcgcg catacttttc agcatcatct gcacaaacat cccttccacc
     3601 tgacgggcca caggacggat attcgccgcc gggtcctggc ccgctttcgc tttcagttcg
     3661 ttcagagatt gcgcatccca ggccgcgctg gccagcaatt taccgtctcc gatcatcaga
     3721 tgatttccag tttggcgcgt agacagcccg cgctctgcat ggactgcaaa atcgacatca
     3781 gatccatcgg cgtcgcgcca agcgcattca gcgcgcgcac tacgctgttc agattggcgc
     3841 tggaacgcac gctctgtagc gatccgccgc tctgacgcaa atctatctga gtctgtggcg
     3901 tcaccacggt ctgcccgccg ccaaatggcg tattcggctg gttgacgttg agttggcgat
     3961 tgactgtcac tgacaaattg ccctgcgcca cagcgcagct atccagcgtg acttcccgat
     4021 tcatgaccac cgaaccggta cgcgagttga tcacgacttt tgcatcctgc ggcgtcacgt
     4081 tgacttccat attttgaatg tccgccagaa aacgcacctg cgagctgttg ccgctgggca
     4141 cgcgtacctg taccgttcgc gcatcaagcg cagtggcgct gccgtaaccg cgggcgcggt
     4201 tgatggcgtc ggtaatttgc tgcgccatcg taaaatcttc gtcgttcaat tgcagattaa
     4261 tggtgttgcc agcgccgaac tgagtcggca actcgcgttc gataatcgcg ccattagtga
     4321 tgcgcccgcc attaagctgg ttaacctgca cgctactgcc gcctgcggaa gcgcccgcgc
     4381 cgccgaccag aatattgccc tgcgccagag catacacctg gctgtccacc ccttttaacg
     4441 gcgtcattaa taacgtcccg ccacgcagac ttttagcgtt ccccattgag gaaacgacga
     4501 catcgatcgt ttgtccctgt cgcgcaaaag gcggatacga cgccgtcacc atcaccgccg
     4561 ccacgttttt caactgcata ttggtgccgg tggggaccgt aatccccagt tgtgacagca
     4621 tgttattcag cgtctgggtg gtaaatggcg tctgggtcgt ctggtcgccc gtaccgtcca
     4681 gcccgaccac cagcccgtag ccgatcagcg agttttcccg tactccctgg acactggtca
     4741 gatcccggat acgctcggcg tgcgccagag tggcaaccag tgccagaacg attcctgcaa
     4801 gagctttaaa cacatacacc tcgcttacat cggcgacaaa ttaaggaaga aacgttgcag
     4861 ccagcccata ttttgcgctt cgttaatata gccgttcccg acatattcaa tccgcgcatc
     4921 cgccacctgt gtcgagggaa cagagttgct accgctgatg gtgcgtggat ttaccacgcc
     4981 ggagaagcgg atgaattccg ttccctgatt aatcgcgatc tgtttttccc ccacgacgtg
     5041 taaattgcca ttggccagaa cctgatcgac ggtcacggtc agcgtgccgc taaaggtatt
     5101 gctggcattc gcgccgcctt taccattaaa agagttgccg ccggaggcct ccatatccgc
     5161 gcgggaatta ccgaataatc cctgcagata acgcggtacc gtatcaaaac caaagctggt
     5221 tttgccgtcg cggctggcat ttgccgacga gcttttactg gcgctgacgt tttcctgtaa
     5281 cacaatcgtg agcgtatcgc cgatattacg cggtcgacga tcttcaaaaa gcggctgata
     5341 gccataatta atcggctgcg cagactgaaa tatggagcca ttcgccaccg gtaccgggcc
     5401 aggtatcggc tgcgccgtgg tcgccccctg cacgagcggt ttagcgggta tccaggcgca
     5461 tcctgtcagc gtcgcgacca tcagggccat aactgggtaa gcgtgaagcg cgtatttttg
     5521 cattaccttc atcttcaaaa tcagggagcc ggtggcgtat cccccaccgg cggcccctta
     5581 gagttgcgtc agtttctgca gcatctgatc ggtcgtcgat actgctttac tgttaatttc
     5641 ataggcgcgt tgaacctgaa tcatgttcac cagctcttcc gccacgttaa cgttcgacgt
     5701 ttcgacatac ccttgataca acaaccccgc gccgttgagc cccggcgtgc tttcgttcgg
     5761 cgcgccggac gattgcgttt cgatatagag gttctcgccg atgctttcca gaccggtgtc
     5821 gttcataaag gtggtcaggt taagctgccc gacctgaacc ggcgcggcct gcccttgctg
     5881 ggtaacgctg accacgccgt cgcggccaat cgtgatgctt aacgcgttgg ccggaatggt
     5941 gattgccggc tgcacctgaa aaccgcccgc cgtcaccagt tgaccattct gatccacctg
     6001 gaaagagccg tcgcgggtat aggcagacgt accgtccggc agcatgacct ggaaaaagcc
     6061 ctgcccttta atcgccacat ctttactgtt gttggtctgc gacaggttcc cctgactgtg
     6121 cagg
//
LOCUS       DAGWFR010000206         6105 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.209, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000206 DAGWFR010000000
VERSION     DAGWFR010000206.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 6105)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6105)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6105
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.209"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..1002)
                     /gene="ptsP"
                     /locus_tag="MOX77_004090"
     CDS             complement(<1..1002)
                     /gene="ptsP"
                     /locus_tag="MOX77_004090"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HCA3359487.1"
                     /translation="MLTRLREIVEKVASAPRLNEALNILVTDICLAMDTEVCSVYLAD
                     HDRRCYYLMATRGLKKPRGRTVALAFDEGIVGLVGRLAEPINLADAQKHPSFKYIPSV
                     KEERFRAFLGVPIIQRRQLLGVLVVQQRELRQYDESEESFLVTLATQMAAILSQSQVT
                     ALFGQYRQTRIRALPAAPGVAIATGWQDATMPLMEQVYEASTLDTSLERERLTGALEE
                     AANEFRRYSKRFAAGAQKETAAIFDLYSHLLSDARLRRELFAEVDKGAVAEWAVKKII
                     EKFAEQFAALTDNYLKERAGDLRTLGQRLLFHLDDSVQGPNAWPERFILVADELSATT
                     "
     gene            complement(1015..1545)
                     /gene="rppH"
                     /locus_tag="MOX77_004091"
     CDS             complement(1015..1545)
                     /gene="rppH"
                     /locus_tag="MOX77_004091"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001655775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HCA3359488.1"
                     /translation="MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINPGE
                     SAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLL
                     QLMSADAEINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMALQD
                     NPPKLQSAPAYRRKRG"
     gene            2228..2923
                     /gene="mutH"
                     /locus_tag="MOX77_004092"
     CDS             2228..2923
                     /gene="mutH"
                     /locus_tag="MOX77_004092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutH"
                     /protein_id="HCA3359489.1"
                     /translation="MSALCPLLTPPASEALLLAQARQLSGYTLGELAVMAGITTPKDL
                     KRDKGWIGVLLEIWLGASAGSKPEQDFAALGVELKTIPVDSLGRPLETTFVCVAPLTG
                     NSGVTWETSHVRHKLKRVLWVPVEGDRSIPLAERRVGSPLLWSPSEEEDRQLRLDWEE
                     LMDMIVLGQVERITARHGEVLQLRPKAANARALTEAIGARGEPILTLPRGFYLKKNFT
                     QALLARHFLLQNP"
     gene            3105..3818
                     /locus_tag="MOX77_004093"
     CDS             3105..3818
                     /locus_tag="MOX77_004093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HCA3359490.1"
                     /translation="MLFAWITDPNAWLALGTLTLLEIVLGIDNIIFLSLVVAKLPTAQ
                     RNHARRLGLAAAMVMRLALLASIAWVTRLTNPLFELFGEAISARDLILLLGGLFLIWK
                     ASKEIHESIEGEEEGLKTRVSSFLGAIVQIMLLDIIFSLDSVITAVGLSDHLFIMMAA
                     VVIAVGVMMFAARPIGEFVDRHPSVKMLALSFLILVGFTLILESFDVHVPKGYIYFAM
                     FFSIAVESLNLLRNKKNPL"
     gene            3989..4207
                     /locus_tag="MOX77_004094"
     CDS             3989..4207
                     /locus_tag="MOX77_004094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgdI/YgdR family lipoprotein"
                     /protein_id="HCA3359491.1"
                     /translation="MKKWAVVISAVGLAFAVSGCSSDYVMATKDGRMILTDGKPQVDD
                     DTGLVSYTDTQGNEMQINRDEVSQIIER"
     gene            4398..5438
                     /locus_tag="MOX77_004095"
     CDS             4398..5438
                     /locus_tag="MOX77_004095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP(H)-dependent aldo-keto reductase"
                     /protein_id="HCA3359492.1"
                     /translation="MHYHRIPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYTIANGI
                     NLIDAAEMYPVPPRPETQGLTESYIGNWLAKRGNREKLIIASKVSGPARNNDQGIRPH
                     QALDRKNIREALHDSLTRLQTDYLDLYQVHWPQRPTNCFGKLGYNWADSMPVVSLLET
                     LDALSEFQRAGKIRYIGVSNETAFGVMRYLHLAEKHDLPRIVTIQNPYSLLNRSYEVG
                     LAEVSQYEGVELLAYSCLAFGTLTGKYLNGAKPAGARNTLFSRFTRYSGEQAQKAVAA
                     YVDIAKRHNLDPAQMALAFVRRQPFVASTLLGATTMAQLKTNVESLHLTLSEEVLAEI
                     EAVHQVYTYPAP"
     gene            complement(5525..>6105)
                     /locus_tag="MOX77_004096"
     CDS             complement(5525..>6105)
                     /locus_tag="MOX77_004096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3359493.1"
                     /translation="CVVLWRNGETRFSLVGTGLFWGAGVTLRFLLVLWVPVALGITDN
                     ATPTYLNAMVAVGIVVGAGAAAKLVTLETVSRCMPAGILIGVVVAIFSLQHALLPAYA
                     LLLLIGMLGGFFVVPLNALLQERGKKSVGAGNAIAVQNLGENSAMLLMLGLYSLAVLV
                     GVPAVAIGIGFGVLFALAIAALWIWQRRQASY"
BASE COUNT         1470 a         1663 c         1547 g         1425 t
ORIGIN      
        1 ggtggtcgcc gacagctcat ccgcgaccag aataaaacgt tccggccagg cgtttggccc
       61 ctgaactgaa tcatcaagat ggaataacag ccgctgcccc agcgtgcgta agtctcccgc
      121 acgttctttg aggtagttat cggttagcgc cgcaaattgc tcggcaaatt tttcgatgat
      181 ttttttaacg gcccactccg caacagcgcc tttgtcgacc tcggcgaaga gttcgcgacg
      241 cagtctggcg tctgaaagca ggtgtgagta cagatcgaaa atggctgccg tctctttttg
      301 tgcgccggcg gcaaagcgtt tgctgtatcg tcggaattcg ttcgccgcct cttccagcgc
      361 gccggtcaat cgttcgcgtt caagagaggt atccagcgta gacgcttcgt aaacctgttc
      421 catcagcggc atggtcgcgt cttgccagcc cgttgcgata gccacgcccg gcgccgcagg
      481 aagcgcgcga attcgcgtct gccggtattg cccgaatagc gctgtgacct gcgactgtga
      541 caggatagcc gccatctgcg tagcgagcgt gacgaggaaa gactcttcgc tttcatcgta
      601 ctggcgcaat tcgcgctgct gcacgaccag cacgccgaga agttggcgac gctgaatgat
      661 cggcacaccg agaaacgcgc gaaaacgctc ctcttttacc gaaggaatgt atttaaagct
      721 gggatgtttt tgcgcatcgg caaggttaat gggttccgcc agcctgccca ccagaccgac
      781 gatcccctca tcaaacgcaa gcgcaacggt tcgaccacgc ggttttttca acccccgcgt
      841 cgccatcagg taataacagc gtcggtcatg atcggccagg taaaccgagc aaacctctgt
      901 atccatcgca agacagatat ccgtgaccag aatattcagc gcctcgttca gacgcggcgc
      961 actggccact ttttcgacta tttcgcgcag gcgagtgagc ataatttgcg tggcttaacc
     1021 tcttttacgt cgataagcag gcgcgctttg tagcttaggg ggattatcct gaagcgccat
     1081 gacaacactt gcaaactctt tcattaccct gcggtagaca tcgcgtttaa atgacaccac
     1141 ttgtcgaacc ggataccagt aacttaccca gcgccagccg tcaaactccg gcgtactgct
     1201 ggtttgcata ttgatttcgg cgtcggcgct cattaactgc aaaagaaacc acttttgttt
     1261 ctggccgata cataccggct ttgtgtccca acgcaccaaa cgttttggta acttgtaacg
     1321 caaccagttg cgagtagaag caaggatccg cacatcttta cggcttaacc caacttcttc
     1381 aaacagttcc cggtacatcg cctgttctgc cgactcccct ggatttatcc cgccctgcgg
     1441 gaactgccag gagtgctgac caaatcgccg ggcccacatc acctgcccct gacgattaca
     1501 aattacgata cctacatttg ggcggtagcc atcgtcatca atcaccggac tacctcaaca
     1561 taaaccttat atatgaacga ttgtttcata ctccagtgag gcggtaaacc actctgtaat
     1621 agtgacacag cctaataaca attgaataac tcacagtaaa tagccgagtt ataaacagat
     1681 gatgacgccc ttgcgccatt ttattcacct tttctgtgga tatagttgtg aagaagtatg
     1741 gaattaccac gggaaaaccc agaacagtct gaattcctca tactgaaaac agtaaaaata
     1801 gtgccttata ttcattgtgt tatagacaaa tcttacatgc caccttcata aagcgtgacc
     1861 agcatcacat ctaagatcct tatgctgatg aaagatcaac cagcgtcggt tttatccaca
     1921 gattgtgcca ataacttacg cactatttgt ctgaattttc gattttcgtc gcacgtcaag
     1981 gctgtaaatg gaaacagtag tggtggtttt acacagttat cccaactttc tgtggataac
     2041 atagtgtaag atcctgttta ttgttagtga ccagaattgg aaaacccgct tcagcgttgc
     2101 gcaacacgaa gaaacaacac aaaaaaggca ataaaaatca gtctattgaa tataagacac
     2161 agaaaaagat aaactctgcc catacggtat aaaaacactg ctcatttttt gacctaaggt
     2221 aattgtcatg tccgctcttt gtccgctact gactccgcct gcttcggaag cattgctgtt
     2281 agcccaggcg cggcagcttt ccggctatac gttaggcgag ctggcggtga tggccggcat
     2341 taccacgcct aaagatttga agcgagacaa aggctggatc ggcgtcttgc tggagatctg
     2401 gctcggcgcc agcgccggga gcaagccgga gcaggatttc gccgcgttag gcgtagaact
     2461 gaaaactatc ccggtggata gtctgggtcg tcctctggaa acaacctttg tttgcgtggc
     2521 gccgttaacc ggtaacagcg gcgtgacctg ggagacaagt cacgtacggc ataaattgaa
     2581 gcgcgtgcta tgggtgccgg tcgaaggcga tcgcagcata ccgttagccg aacgccgcgt
     2641 aggttcgccg ctactctgga gtccgagtga agaagaggac aggcagctac gcctcgactg
     2701 ggaagagctg atggacatga tagtgctggg ccaggtggaa cgcattaccg cccgccatgg
     2761 cgaagtcttg caactgcgac ccaaagccgc caatgccagg gcgctcaccg aggctatcgg
     2821 cgcgcgcggg gaacctattt tgacgctacc gcgtggattt tatctgaaaa aaaattttac
     2881 gcaggcgctg ctggctcgcc attttttatt gcagaatccg taacgtccat tacacgcaaa
     2941 tgcgcctccg ctatggctac gcgtcgggcc gacgccggat aaacgtaagc gtattgtcgc
     3001 cgctatttta caccgttcct ggttgcgcaa attcagcctg ggctttcgcc cgtcactcga
     3061 cgggcctata attaccgctt ctttttttgg caggactttg ttcgatgtta tttgcatgga
     3121 taaccgatcc taatgcctgg ctggcgctcg gtacgctgac gctgctggag attgtacttg
     3181 ggatcgacaa cattattttt ctttctctgg tggtagcaaa acttcctacg gcgcaacgga
     3241 accacgcacg gcggcttggg ttggcggcgg cgatggttat gcgcctggcg ctgctggcgt
     3301 caatcgcctg ggtcactcgg ctgactaatc cgctgtttga gcttttcggc gaagcgattt
     3361 ccgcccgcga tctcattctg ttactgggtg ggttattttt aatctggaaa gccagcaagg
     3421 agatccatga gtccatcgaa ggcgaagaag aagggttaaa aacccgggtt tcttctttcc
     3481 tgggcgcaat agtgcagatt atgctgctgg atattatttt cagccttgat tcagttatca
     3541 cagcggttgg cctctccgat catctgttta ttatgatggc ggcagtcgtt attgccgtgg
     3601 gtgtcatgat gtttgcggca cggcccatcg gcgagtttgt cgatcgtcat ccgtcggtaa
     3661 aaatgctggc gctctccttt ctgatcctgg ttggctttac cctgattctg gaaagtttcg
     3721 acgttcacgt tccgaaaggg tatatctatt tcgccatgtt cttctctatc gcagtagaga
     3781 gcctgaacct gttgcgtaat aaaaagaatc cgctgtaatc ctgtctcgct cccccgccgg
     3841 gggagcgaat actcacttta tttcctttct tctcacagat taagattttg ctgcttccga
     3901 catgcagagc tgcgcgttat tactagacta ttatcagaca tatgattaac agactattat
     3961 cagatgcagg ctacgtgagg aaaaacggat gaaaaagtgg gcagttgtaa tttccgcagt
     4021 agggttggct tttgcggtat ccggatgcag cagcgattat gtaatggcga cgaaagatgg
     4081 tcgtatgatc ctgaccgatg gaaaaccgca agttgacgat gataccggtc tggtcagcta
     4141 taccgataca cagggaaacg agatgcaaat caaccgtgac gaagtgtctc aaatcatcga
     4201 acgttaagcg gtggcctgtg atcgaggtca gcgttctgca agccttcagg ctgcgtcccg
     4261 taacggtgcg tggcgaccac gcccggtaac aattacgccg tgcagcctgc aattttactt
     4321 tcccttttgc cttccctctg ccatttttat tgtcctttgt cgggaatttc tgacttcata
     4381 ataaaaagga aacggctatg cactatcacc gtatacccca cagctcgctc gaagtaagta
     4441 cgctagggct gggcacaatg acatttggtg aacaaaacag cgaagccgac gctcacgcac
     4501 agctcgacta taccatcgca aatggcatta accttatcga cgccgccgag atgtatccgg
     4561 taccgccgcg cccggaaaca caagggctga cggagtccta tatcggtaac tggctcgcca
     4621 aacgcggcaa ccgtgaaaaa ctgatcatcg ccagcaaagt tagcggaccg gcacgtaata
     4681 atgatcaagg catccggcct catcaggcgc tggatcgtaa aaatattcgc gaagcgctac
     4741 acgacagttt gacccggttg cagaccgact atctggattt gtatcaggtg cactggccgc
     4801 agcgccccac taactgcttc ggtaaactcg gctataactg ggcggactcc atgccagtag
     4861 taagtctgct ggagacgtta gacgcgctaa gtgagtttca gcgagcgggt aagattcgtt
     4921 atattggcgt ttcaaatgag acagcgtttg gcgttatgcg ctatctgcat ctggcggaaa
     4981 aacatgacct gccgcgtatt gtcactatcc agaaccccta tagcctgtta aaccgcagct
     5041 acgaggtcgg actggcggaa gtcagccagt atgaaggtgt tgaattgctc gcctattcct
     5101 gtctggcgtt tggcacatta accggtaaat acctgaacgg ggccaaaccc gcaggcgcgc
     5161 ggaatacctt gttcagccgc ttcacacgtt acagcggcga acaggcacaa aaagccgttg
     5221 ccgcctacgt cgatatcgcg aagcgtcaca atcttgatcc ggcgcagatg gcgctggcct
     5281 ttgttcgccg ccagccgttt gtcgccagta cgttactggg cgcaaccacg atggcgcagc
     5341 tcaagacgaa tgtggaaagt ctgcatctga cgttaagcga agaggtcctg gcggagatag
     5401 aggcggtgca tcaggtttat acctacccgg cgccgtgatg gtcagtgccc ggtggcgcta
     5461 cgcttccggg cttacagaga caatgtaagc cggataacgc gcactcgccg cccggcatat
     5521 tcactcagta tgatgcctgc cggcgctgcc agatccacag cgccgcgatc gccagcgcga
     5581 acagcacgcc aaagccgata cctatcgcca ctgccggaac gccaaccagc accgccagcg
     5641 agtacagtcc cagcattaat agcatggcgc tattctcgcc cagattttgt acggcaatgg
     5701 cattcccggc accaacgctc ttcttaccgc gctcctggag caaagcgttg agcggcacca
     5761 caaaaaagcc gcccagcata cctatcaaca acaacaaggc ataagcaggc agcaatgcgt
     5821 gctgtaatga gaagatcgca accacaacgc caatcaaaat cccagcgggc atacagcgcg
     5881 atacggtctc cagcgtcacc agttttgccg ccgcacccgc gccgaccaca atgcctaccg
     5941 ccaccatggc gttcaggtaa gtcggcgtgg cgttatccgt aatgcccagc gccaccggca
     6001 cccacagcac cagcagaaaa cgcagcgtca cgcctgcgcc ccagaatagc ccggtcccca
     6061 ccagcgaaaa acgcgtttca ccgttacgcc aaaggacaac gcaag
//
LOCUS       DAGWFR010000207         6067 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.210, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000207 DAGWFR010000000
VERSION     DAGWFR010000207.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 6067)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6067)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6067
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.210"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..1084)
                     /locus_tag="MOX77_004097"
     CDS             complement(<1..1084)
                     /locus_tag="MOX77_004097"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461500.1"
                     /note="catalyzes the formation of
                     2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from
                     N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and
                     L-glutamine in purine biosynthesis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase"
                     /protein_id="HCA3359494.1"
                     /translation="MMEILRGSPALSAFRINKLLARFQAANLQVHNIYAEYVHFADLN
                     APLNDSEQAQLTRLLQYGPALSSHTLAGKLLLVTPRPGTISPWSSKATDIAHNCGLQQ
                     IDRLERGVAYYIEASTLTAEQWRQVAAELHDRMMETVFSSLTDAEKLFIHHQPAPVSS
                     VDLLGEGRQALIDANLRLGLALAEDEIDYLQEAFTKLGCNPNDIELYMFAQANSEHCR
                     HKIFNADWIIDGKPQPKSLFKMIKNTFETTPDYVLSAYKDNAAVMEGSAVGRYFADHN
                     TGRYDFHQEPAHILMKVETHNHPTAISPWPGAATGSGGEIRDEGATGRGAKPKAGLVG
                     FSVSNLRIPGFEQPWEEDFGKPERIVT"
     gene            1109..1339
                     /locus_tag="MOX77_004098"
     CDS             1109..1339
                     /locus_tag="MOX77_004098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001669324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3359495.1"
                     /translation="MCARGETAAIIKNLTRRRNRLRRNKITAFSCHTVRLSLRISCQL
                     AHCYAKCRSLVTYLLQQNIFFSPRQRTIQRIN"
     gene            1340..2767
                     /gene="mltF"
                     /locus_tag="MOX77_004099"
     CDS             1340..2767
                     /gene="mltF"
                     /locus_tag="MOX77_004099"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000734247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane-bound lytic murein transglycosylase
                     MltF"
                     /protein_id="HCA3359496.1"
                     /translation="MKKLKINYLFIGILTLLLAAALWPSIPWFGKTENHIAAIQARGV
                     LRVSTIDSPLTYSVINGKKYGLDYELAQQFANYLGVKLKVTVRQNISQLFDDLDNGNA
                     DLLAAGLVYDSARVKNYQPGPMYYSVSQQLVYRVGQYRPRSLATVNENQLTIAPGHVV
                     VNDLQRLKETKFPDLSWKVDDKKGSTTLLEEVISGKLDYTIADSVAISLFQRVHPELA
                     VALDVTDEQPVTWFSRLDDDNTLSAALLDFFNSINEDGSLARIEEKYLGHGDDFDYVD
                     TRSFLRAVDNVLPELEPLFKKYAKEIDWRLLAAISYQESHWDPLATSPTGVRGLMMLT
                     KNTAQSLGLTDRTDAEQSISGGARYLEDMMAKVPETVPEDERIWFALAAYNMGYAHML
                     DARSLTVKTKGNPDSWTDVKQRLPLLSQKPYYSKLTYGYARGHEAYAYVENIRKYQIS
                     LVGYLQEKEKQEAEAMKLAQDYPAV"
     gene            complement(2935..3486)
                     /gene="tadA"
                     /locus_tag="MOX77_004100"
     CDS             complement(2935..3486)
                     /gene="tadA"
                     /locus_tag="MOX77_004100"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA adenosine(34) deaminase TadA"
                     /protein_id="HCA3359497.1"
                     /translation="MPPAFITGVTSLSDVELDHEYWMRHALTLAKRAWDEREVPVGAV
                     LVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVLQNYRLLDTTLYVTLEPCVMCA
                     GAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGMNHRVEIIEGVLRDECATLLSDFF
                     RMRRQEIKALKKADRAEGAGPAV"
     gene            complement(3511..4146)
                     /gene="yfhb"
                     /locus_tag="MOX77_004101"
     CDS             complement(3511..4146)
                     /gene="yfhb"
                     /locus_tag="MOX77_004101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase C"
                     /protein_id="HCA3359498.1"
                     /translation="MVSHERRVVFFDLDGTLYQQDMFGSFLRYLLRRQPLNALLVLPL
                     LPIIGIGLLVKGRAARWPMSLLLWGCTFGHSETRLQAHQADFVRWFRANVTAFPVVQE
                     RLTTYLLSSDADIWLITGSPQSLVEQVYFDTPWLPRVNLIASQMARRYGGWVLTVRCL
                     GHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTPHGELQQLE"
     gene            complement(4150..5511)
                     /locus_tag="MOX77_004102"
     CDS             complement(4150..5511)
                     /locus_tag="MOX77_004102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
                     /protein_id="HCA3359499.1"
                     /translation="MDKTAALASDILRGIGGEQNILRLENCMTRVRVEVQDDSQLDIP
                     RLKALPGVSGYVKQGEQHQLIVGPGKAAQVVDAMRVQIAAGGVKPDDAMARTKSEAKA
                     KYKAPMSDALRKLANVFIPLIPAFIASGLITGIINILKRPDIVGDVAVHYPNLLGLMG
                     IFGSAVFAIMNILVGVNTAKVFGGSQALGGVMAGILSSPQLAQITLFGEALQPGRGGV
                     IAVLLVVALMCWIERQFRKLLPGSLELILNPLLTTVITGAVAIVALQPLGGWISDAIA
                     HGASWAIDRGGFLVGAVLAGTFLPLVLIGLHQGLVPIHVELVQAHGYNALFPILAMAG
                     VGQIGAAIAVLMKTRNARLKKVIKGALPVGLLGIGEPLIFGVTLPLGKPFIGACLGGA
                     VGGALISYWKVATVITFGISGLPLALTIVAGKVLFYLLGYLIAVIAGFIFTWLLGFND
                     PEE"
     gene            complement(5522..>6067)
                     /locus_tag="MOX77_004103"
     CDS             complement(5522..>6067)
                     /locus_tag="MOX77_004103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramic acid 6-phosphate etherase"
                     /protein_id="HCA3359500.1"
                     /translation="QQAGEDDLVALNLQEQDLVVGLAASGRTPYVIGGLRYARQSGCT
                     TVAVSCNPDSPIAREANIAISPVVGPEALTGSTRLKSGTAQKMVLNMISTGAMVKFGK
                     VYQNLMVDMKATNVKLVDRACRMVVEATGIGREEAETLLKQTDFEVKPAILMALTGLD
                     AAAAREKLAAHQGFLRAALEH"
BASE COUNT         1478 a         1746 c         1557 g         1286 t
ORIGIN      
        1 cggtgacaat acgttccggc ttgccaaaat cctcttccca cggctgttca aagcccggaa
       61 tacgcaggtt ggaaacggag aagcctacca gcccggcttt tggtttcgcg ccacgcccgg
      121 tggcgccttc atcacgaatt tcgccgccgg aaccggtcgc cgcccccggc cacggagaga
      181 tggcggttgg gtggttatgc gtttcgacct tcatcagaat gtgcgcgggc tcctgatgaa
      241 aatcgtaacg gccggtattg tggtcggcga agtagcgccc caccgcagat ccttccatca
      301 ccgcggcatt gtctttatag gcagagagca catagtccgg cgtggtttcg aaggtgtttt
      361 taatcatttt aaacagcgac ttcggctgcg gtttaccgtc gataatccag tcggcgttaa
      421 aaatcttgtg gcggcagtgc tcggagttcg cctgggcgaa catgtacagt tcgatatcgt
      481 tcgggttgca tcccagtttg gtaaacgcct cctgcaaata gtcgatttca tcttccgcca
      541 gcgccagacc gagacgcagg ttagcgtcaa ttaacgcctg acggccttct cccagcagat
      601 cgacactgga aaccggcgca ggctgatggt ggataaacag tttttccgca tcggttaaag
      661 aagagaacac cgtctccatc atacggtcgt gcagctctgc ggccacttgt cgccactgtt
      721 ccgccgtcaa cgtcgaagcc tcgatatagt acgctacgcc gcgctccaga cggtcaatct
      781 gttgcaggcc gcagttgtgg gcgatatccg ttgcttttga agaccagggg gagatggtac
      841 caggacgcgg tgtgaccaac aggagtttac ccgccagcgt atggctgcta agcgccgggc
      901 cgtattgcag cagacgggta agctgcgcct gctcgctatc atttaacggg gcgttcaggt
      961 cagcaaaatg gacatactca gcgtatatat tgtggacctg gaggttggca gcctgaaagc
     1021 gcgccagcag tttattgata cggaatgcag acagtgcagg cgaaccacgc agaatttcca
     1081 tcataagtct ctcgtcttct aagcttcggt gtgcgcaagg ggggaaacgg ccgccattat
     1141 aaagaatctg acgcgccgac gaaaccgttt gcgtagaaat aaaatcaccg ctttttcttg
     1201 tcatacggtg cggctatcgt tgcgaataag ttgccaactg gcgcattgtt acgcaaaatg
     1261 ccgctcatta gtgacttatc tattgcagca aaacatcttt ttcagcccga ggcaacgcac
     1321 gatccagaga attaactaat tgaaaaaatt aaagattaat tatctgttca tcggcatatt
     1381 gacgctgctg ctggcagcag ccctttggcc ctcaatcccc tggttcggta aaaccgaaaa
     1441 ccatatcgcc gcgattcaag cccggggggt actgcgcgtc agtacgatcg actcgccatt
     1501 aacctattcc gttatcaacg gtaaaaaata tggtctggac tatgaactgg cgcagcagtt
     1561 cgccaactat ctcggcgtga agctgaaagt gacggtgcgc cagaatatca gccagttgtt
     1621 tgacgatctg gataacggca atgccgacct gctcgcggca gggctggtct acgacagcgc
     1681 gcgcgttaaa aactatcagc ccggccccat gtattattcg gtttcgcaac agctcgttta
     1741 ccgggtcgga caatatcgcc cacgttcgct ggcgaccgtt aacgagaatc agcttaccat
     1801 tgcgccaggg cacgtcgtgg tcaatgattt acagcgttta aaagagacaa agtttcccga
     1861 cctgagctgg aaggtggatg ataaaaaagg ctcgacgacg ctgctggaag aggtcatcag
     1921 cggcaaactg gattacacca ttgccgattc agtggcgatc agtctgtttc agcgcgtcca
     1981 tcccgaactg gccgtggcgc tggatgtcac ggatgaacag cccgtgacct ggtttagccg
     2041 actggacgac gataatacgc tctccgccgc gctgctcgat tttttcaatt cgatcaatga
     2101 agacgggtcg ttggcgcgga tcgaagagaa atatctgggg catggcgatg atttcgacta
     2161 cgttgatacc cgctctttcc tgcgagcggt ggataacgtc ctgccggagc tggaaccgtt
     2221 atttaaaaaa tatgccaaag agatagactg gcgcctgctg gcggcgattt cttatcagga
     2281 atcacactgg gacccgctgg cgacctcgcc aaccggcgtg cgcggcctga tgatgctgac
     2341 taaaaatacc gcccaaagtc tggggctgac cgaccgtacc gatgcggagc aaagcatcag
     2401 cggcggtgct cgctatcttg aagatatgat ggctaaagtt cccgaaaccg ttccggaaga
     2461 cgagcgtatc tggtttgcct tagccgccta caatatgggt tatgcgcaca tgctcgatgc
     2521 cagatcgctg acggtaaaaa ccaaaggcaa tccggatagc tggaccgatg tgaagcagcg
     2581 tttgcctctg ttaagccaaa aaccgtatta cagtaagcta acctacggtt acgcgcgtgg
     2641 acatgaggct tatgcttatg tggaaaatat ccgtaaatac cagataagtt tggtggggta
     2701 tttgcaggaa aaagaaaagc aggaagcgga agctatgaaa ctggcgcagg attacccggc
     2761 ggtgtagccg gaggagctga ataaagcccc cttccccttc ctgtcgtttt tatcgcagtc
     2821 atcaggctac ctgacgcatt cgccgtcttt actgtttacg ccgcagaaga aagaagaaaa
     2881 atagcgcgat ggtcttatcg gatggcgacg cgcaacgtct tatccggcat tgcgctatac
     2941 tgccggcccc gcgccttccg cacggtcggc tttcttcaga gctttaattt cctgacgacg
     3001 catacggaaa aaatcactga gcagcgtcgc acattcatcg cgcaacaccc cttcaataat
     3061 ctcgacccgg tgattcattc ccggatggtg cagcacgtca attagcgatc cggccgcgcc
     3121 agtttttgca tcgcgcgcgc caaagacaac gcgtccaatg cggctatgca ccatagcgcc
     3181 tgcgcacatc acacagggtt ccagcgtgac atacagcgtg gtatccagta accgataatt
     3241 ctgcaatacc agaccgccct gacgcagcgc cattatttca gcatgcgcag taggatcgtg
     3301 gcggccaatg ggtcgattcc agccttcgcc aatgacgcga tggttatgca ccaataccgc
     3361 gccaaccgga acctcgcgtt cgtcccaggc gcgtttcgcc agcgtcagcg cgtggcgcat
     3421 ccagtattcg tgatctaatt cgacatcaga caaagaggta actccggtaa tgaaagcggg
     3481 cggcattata cacagacgct atgcgtttca ctattcgagc tgctgcaact cgccgtgcgg
     3541 cgtcacccgc cagcgatgct ggcaaaaata aagcagcggg ttatcctgtt tgctgtcgct
     3601 gtagccgcta taaagacgca acggcgtacc gattttacgt tccagttgcg cgactttttc
     3661 atggcccaga cagcgcacgg ttaataccca gccgccatac cgtcgcgcca tctggctggc
     3721 gatgaggtta acacgcggca accacggcgt atcaaaatag acttgctcta ccaatgattg
     3781 cggagaaccg gtaataagcc agatatccgc gtcagagctc aatagatagg tggtcagacg
     3841 ctcctgtacg accggaaacg ccgtgacgtt agcgcgaaac caacggacaa aatccgcctg
     3901 atgcgcctgc aaacgcgttt cgctatggcc aaaagtacag ccccacaata acagactcat
     3961 cggccagcgg gccgcacgcc cttttaccag taaaccgata ccgataatgg gcaacaacgg
     4021 cagtacgagc agcgcattta gcggctgacg gcgcagcaaa taacgcagaa aactgccgaa
     4081 catatcctgt tgatataacg ttccatccaa atcaaaaaag acgacacgac gctcgtggct
     4141 gaccaaacct tactcctctg gatcattgaa ccccagcagc caggtaaaaa taaacccggc
     4201 aattaccgct attaaatagc ctaacagata gaacaggact tttccggcaa caattgttaa
     4261 tgccagcggc aaaccggaaa taccaaaggt aattaccgtc gccactttcc agtagctgat
     4321 caacgccccg cctaccgcgc cgccgaggca agcgccaata aatggcttac ccaatggcag
     4381 cgtgacgcca aaaatcagcg gctcgccaat ccccagcagt ccgaccggaa gcgcgccttt
     4441 aatcaccttt ttgagccgcg cattgcgggt tttcatcagt acggcaatgg ccgcgcctat
     4501 ctgaccaacc cccgccatcg ccaggatggg aaacagcgcg ttatagccgt gcgcttgcac
     4561 cagctccaca tgaataggca ccagcccctg atgcagcccg atcagtacca acggcaggaa
     4621 ggttccggct aacaccgcgc ccaccagaaa accgccgcga tcgatagccc aggacgcgcc
     4681 gtgagcgata gcgtctgaaa tccagccgcc aagcggttgc agagcgacaa tcgctaccgc
     4741 gccggtgata acagtcgtca ataaagggtt aagaattaac tccagcgacc ccggcagcag
     4801 cttacggaac tggcgctcaa tccagcacat taacgccacc accagcagga cggcgataac
     4861 gccgccccgt cccggctgaa gcgcctcgcc aaagagcgta atctgcgcca gttgcgggct
     4921 ggaaaggatc cccgccatca cgccgcctaa cgcctgcgat ccgccaaaga ctttcgcggt
     4981 attgacgcca accagaatgt tcatgatagc gaacaccgcg ctaccaaata tccccatcag
     5041 gcccagcagg ttaggatagt ggacggcaac atcgccgacg atatccgggc gtttaagaat
     5101 attgataatg ccggtaatca agccggatgc gataaaggcg ggaataagcg gaataaaaac
     5161 attcgccagc ttacgcaacg catcgctcat cggcgcttta tacttcgctt tcgcctcgga
     5221 tttggtacgc gccatagcat cgtccggctt tacaccacct gcggcaatct gcacgcgcat
     5281 cgcatcaacc acctgtgcag ccttccccgg cccaacgatc agctgatgtt gctccccttg
     5341 ctttacgtat ccactgacgc caggcaacgc ttttaagcgc ggaatatcca gttggctgtc
     5401 gtcctgtacc tccactctga ctcgcgtcat acagttttcc aggcgcagaa tattttgctc
     5461 tccgccgata ccacgtaaaa tgtcgctggc gagcgctgcc gtcttatcca tacacacctc
     5521 tttagtgttc taacgccgcc cttaaaaagc cctgatgagc ggcgagtttt tccctggcgg
     5581 ctgcagcatc cagccccgta agcgccatca aaatggcggg cttaacctca aaatcggtct
     5641 gtttcagcaa cgtttccgcc tcttcacgac ctatcccggt cgcttcaacg accatccgac
     5701 acgcgcgatc gaccagtttg acgttggtgg ctttcatatc caccatcagg ttctgataga
     5761 ccttaccgaa cttcaccatc gcgccggtag aaatcatatt gagcaccatt ttctgcgcgg
     5821 tgccggattt cagccgcgtg gagccggtaa gcgcttccgg cccgacaacg ggcgaaatag
     5881 cgatattagc ctcccgcgca ataggcgaat ctggattaca ggagacggca acagtggtac
     5941 aaccggactg tcgcgcatag cgcaggccac caatcacata gggtgtacga cccgacgccg
     6001 cgagccccac gaccagatcc tgttcttgca gatttagcgc gacaagatcg tcttcgcctg
     6061 cctgttg
//
LOCUS       DAGWFR010000208         6047 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.211, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000208 DAGWFR010000000
VERSION     DAGWFR010000208.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 6047)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6047)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6047
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.211"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            176..2284
                     /gene="foxA"
                     /locus_tag="MOX77_004104"
     CDS             176..2284
                     /gene="foxA"
                     /locus_tag="MOX77_004104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrioxamine B receptor FoxA"
                     /protein_id="HCA3359501.1"
                     /translation="MPLEMFMFATTRMALLIGGAIGGATFPLFAQETTKNDTVIVTSP
                     VQSGATRLATPDIETPQSVSIITRQQFEEQGATSVRQAVSYTPGVYSNQIGASNRFDY
                     IVLRGFSDGSLDNVYLDGLKMMGDTNSHSSLVVDPWFLEDIEVVRGPASVLYGRSSPG
                     GIVSLTSRKPAFDAGGEVKLFAGNNNQRGAAFDVTGPLDDNERVAARLSGMTRYADSQ
                     FTPLKEERYALMPSLTWRITDRTRLDLMAYLHRDPQGGSHSGLPYQGTVVPYNGGKIS
                     NTFFEGEDDYDKYDRRENMVGYNIEHLFDNGWSVRQKLRYLHTKVTLNQVYAAGWLNE
                     TALNRGYSGSGEKMSAIALDNQLDGSVDTGAINHRLLVGIDYQDRSNHTTGYYGAFPP
                     IDAFNPVYGAQPDYITLYSREKHKLRQTGYYLQDQMSWDRWRFTLGGRYDRVSVSNID
                     KLHDSRSDLDKNNVSTRAALLYLFDNGVAPYLSYSTAFTSTSFADENGNVLEPMKGKQ
                     WEAGVKYEPLGGNSQFSAAVYRINQTNIATKEEPTDPYRSIGEIESKGVELEAISHLS
                     DSVRLQAAYTYTDIRYKKSSPQEQGKRAVYAPRNQASAWLSYDVKSGLLEWLTLGSGI
                     RYVNGVTSDRLNTHTLPSYTLVDMVVGYDLSSIGLNGLSAQLNVNNLTDKRYVAACNS
                     LSYCYFGAERSIVGSVSWAF"
     gene            complement(2325..2957)
                     /locus_tag="MOX77_004105"
     CDS             complement(2325..2957)
                     /locus_tag="MOX77_004105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family transporter"
                     /protein_id="HCA3359502.1"
                     /translation="MEPFHAVVLTVSLFVLTFFNPGANLFVVVQTSLASGRRAGVITG
                     LGVATGDAFYSGLGLFGLATLITQCEAVFSLIKIVGGAYLLWFAWNSIRHQATPQMST
                     LQTPIAAPWTIFFRRGLMTDLSNPQTVLFFISIFSVTLSAETPTWARLMAWAGIVLSS
                     VIWRIFLSQAFSLPAVRRAYGRIQRIASRVIGAIIGMFALRLLYEGMTHR"
     gene            3189..3464
                     /locus_tag="MOX77_004106"
     CDS             3189..3464
                     /locus_tag="MOX77_004106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1471 domain-containing protein"
                     /protein_id="HCA3359503.1"
                     /translation="MKTGYKVMLGALAFVVTNVYAAEIMKKTDFDKVASEYTKIGTIS
                     TTGEMSPLDAREDLIKKADEKGADVVVLTSGQTENKIHGTADIYKKK"
     gene            complement(3600..5225)
                     /gene="prpR"
                     /locus_tag="MOX77_004107"
     CDS             complement(3600..5225)
                     /gene="prpR"
                     /locus_tag="MOX77_004107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propionate catabolism operon regulatory protein
                     PrpR"
                     /protein_id="HCA3359504.1"
                     /translation="MTTAHSAPRDNSDKPVIWTVSVTRLFELFRDISLEFDHLATITP
                     IQLGFEKAVTYIRKKLATERCDAIIAAGSNGAYLKSRLSIPVILIKPSGFDVLQALAK
                     AGKLTSSIGIVTYQETIPTLLAFQKTFHLCLEQRSYVTEEDARGQINELKANGIEAVV
                     GAGLITDLAEEAGMTAIFIYSAATVRQAFHDALDMTRLTRRQRVDYPSGKGLQTRYEL
                     GDIRGQSPQMEQLRQTITLYARSRAAVLIQGETGTGKELAAQAIHQTFFHRQPHRQNK
                     PSPPFVAVNCGAITESLLEAELFGYEEGAFTGSRRGGRAGLFEIAHGGTLFLDEIGEM
                     PLPLQTRLLRVLEEKAVTRVGGHQPIPVDVRVISATHCDLDREIMQGRFRPDLFYRLS
                     ILRLTLPPLRERQADILPLAESFLKQSLAAMEIPFTESIRHGLTQCQPLLLAWGWPGN
                     IRELRNMMERLALFLSVDPAPTLDRQFMRQLLPELMVNTAELTPSTVDAHTLQDVLAR
                     FKGDKTAAARYLGISRTTLWRRLKAGAKDQSGN"
     gene            5491..>6047
                     /locus_tag="MOX77_004108"
     CDS             5491..>6047
                     /locus_tag="MOX77_004108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/phosphoenolpyruvate mutase
                     family protein"
                     /protein_id="HCA3359505.1"
                     /translation="MSLHSPGQAFRAALAKENPLQIVGAINANHALLAQRAGYQAIYL
                     SGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCPLPLLVDADIGFGSSAFNVARTVK
                     SIAKAGAAALHIEDQVGAKRCGHRPNKAIVSKEEMVDRIRAAVDARTDPNFVIMARTD
                     ALAVEGLEAALDRAQAYVDAGADML"
BASE COUNT         1435 a         1529 c         1651 g         1432 t
ORIGIN      
        1 tctctgacgg cgtcccgcca ctgtgcgtaa cgcgccccgc cagagcggta atatccgccg
       61 ctaacccggt tttctgccgc tttgggtgat tttttatcat tgcgcatagg caatctggcg
      121 ttacgcatag tggttcgtta tctctaaagg gtaataattc ttatttacaa taaagatgcc
      181 tttggagatg ttcatgtttg cgacaacgcg tatggcgcta ttgataggcg gagctatcgg
      241 cggcgcgact tttcctcttt ttgcccagga aaccacaaaa aatgataccg tcattgtcac
      301 ctcgcccgtt cagagtggcg cgaccaggct ggcgacgcca gatattgaaa cgccgcagtc
      361 ggtatccatt attacccgcc agcagtttga agagcagggc gcaaccagcg tgcgtcaggc
      421 ggtcagctac accccaggcg tatacagtaa ccagataggc gcctctaacc gctttgatta
      481 catcgtattg cgtggttttt cggacggtag tctggataac gtctatctcg acgggttaaa
      541 aatgatgggc gacaccaatt cgcacagttc gttggtggtt gacccctggt ttctggaaga
      601 tatcgaggtg gtacgcggcc cggcgtccgt tctgtatgga cgttcatcgc caggcggcat
      661 tgtctcgttg acgtcgcgaa aaccggcgtt tgatgccgga ggagaagtga agctgtttgc
      721 cggcaataac aaccagcgcg gggcggcttt tgatgtgacc ggcccactgg atgacaatga
      781 acgtgtggcg gcgcgtctta gcggcatgac acgttacgcc gattcgcagt ttacgcccct
      841 gaaagaggaa cgttatgcgc tgatgccgag cctgacctgg agaattaccg atcggacgcg
      901 tcttgatctt atggcctatc tgcaccgtga tccgcaaggc ggtagccact ccggactgcc
      961 ttatcaaggc acggttgtac cttataacgg cggaaaaatt tctaacactt tctttgaagg
     1021 tgaagatgac tacgacaaat acgatcgccg tgaaaatatg gtgggttata acattgagca
     1081 tctgttcgat aacggctggt cggtacggca aaaattgcgt tatttgcata ccaaagtgac
     1141 gttgaatcag gtctatgccg caggttggtt gaatgaaacg gcgctgaatc gcggctattc
     1201 cggctccggg gagaaaatgt cggctatcgc gctggataat cagctcgacg gcagcgtgga
     1261 taccggggcg attaatcatc gtctgctggt ggggatcgat tatcaggatc gcagtaatca
     1321 tactactggc tattatggcg cgtttccgcc gattgacgct ttcaaccctg tttatggcgc
     1381 tcagccggat tacattacgt tgtatagccg tgaaaaacat aagctgcggc agaccggata
     1441 ctatttacag gatcagatgt catgggatcg ctggcgcttt acgttgggcg gtcgttacga
     1501 tcgggtcagc gtgtctaaca tcgacaaact tcatgattca cgcagcgatc tcgataaaaa
     1561 caacgtcagc acccgtgccg cgttgcttta tctgttcgac aatggcgtcg ccccctatct
     1621 cagttattct accgcgttta cgtcgaccag cttcgccgac gaaaacggca atgtgctgga
     1681 accgatgaaa ggcaagcagt gggaggcggg ggtaaaatac gaaccgctgg gggggaacag
     1741 ccagtttagc gccgccgtgt atcgtattaa ccaaaccaat atcgcgacca aagaagaacc
     1801 taccgatccg taccgctcga ttggtgaaat tgagtctaaa ggggttgaac tggaggccat
     1861 tagccatttg tcggatagcg tccgtttgca ggcggcgtat acctatactg atatccgtta
     1921 taagaaaagt agcccgcaag agcaggggaa gcgcgcggtt tatgctccac ggaaccaggc
     1981 cagcgcctgg ctaagctacg atgtgaaaag cggtctgtta gagtggctga ctttgggctc
     2041 cggcatccgg tacgtcaacg gcgtgaccag cgatcgcctg aatacccaca cgttgccgtc
     2101 ctatacactg gtcgacatgg tggttgggta tgatttatcc agcattgggt taaatggctt
     2161 gagcgcccag ctcaacgtaa ataatctgac ggacaaacgc tatgtcgctg cctgtaattc
     2221 gctctcttat tgttattttg gcgccgagcg tagcattgta ggcagcgtgt catgggcgtt
     2281 ttgataacgc ttatcgtccg gtagcaaagg ctaccgggca aacattagcg gtgcgtcatg
     2341 ccttcataga gaagtctgag cgcaaacatc ccgataatgg cgccgataac acggctggca
     2401 atgcgctgta ttcgtccata agcgcggcgg actgcgggga gcgaaaaggc ctggctgaga
     2461 aaaatacgcc agataacgga tgacagcaca attccggccc aggccattaa ccttgcccat
     2521 gtgggcgttt ctgcgctaag cgttacggaa aaaatactga taaaaaacag tacggtttgc
     2581 ggattggata aatcggtcat taatccccgg cgaaagaaaa ttgtccacgg ggcggcaatc
     2641 ggcgtctgga gcgtgctcat ttgcggcgtc gcctggtggc gaatactgtt ccaggcgaac
     2701 cataataaat aggcgccgcc gacaattttg ataagagaaa ataccgcttc gcattgcgta
     2761 atgagcgtcg ccagaccgaa aagccccagc ccggaataaa aggcgtctcc cgtggcgacg
     2821 cccaggccgg tgatgactcc cgcccggcgt cctgatgcga ggctggtttg caccaccaca
     2881 aacagattcg cgccgggatt aaaaaaggtt aacacaaaca gactgacggt aagcacaacg
     2941 gcatgaaacg gctccataga caactcttcc catagcctca agaaataacg ttcatcttat
     3001 taatagtcaa accagatgat tgcgagtgag atcacaaagc aggggcgttt taatccgcgt
     3061 cgttatgccg agtgagcggg ggctgactgg atttttccag caatctacac tacttattta
     3121 atcagtccga acggcctttt tgttctgata aagcgatgat ggcgtaataa taaaacgagg
     3181 gttttgctat gaaaactggc tacaaggtta tgcttggcgc attagcgttt gtcgtgacaa
     3241 acgtttatgc cgcagaaatc atgaaaaaaa cggactttga taaagtcgcc tccgaataca
     3301 cgaaaattgg cacgatttcc accaccgggg aaatgtcgcc gctggacgcc agagaagatt
     3361 taatcaaaaa ggcggatgaa aaaggggcgg atgtggtggt gctgacgtcc gggcagacag
     3421 aaaataaaat tcatggtacg gctgatattt ataaaaagaa ataaaagcgt tgcatcataa
     3481 aaatacccgc ctgggtttcc ggcgggtatt tttattcctg gcaaccggca tccgttttgc
     3541 cggatgacgg cctgcagtaa acgtagcgcc atcaggcatt caggacgctg tcatttgtct
     3601 taattacccg actggtcttt ggcacctgct tttaaacgac gccacagagt ggtgcggcta
     3661 atccccagat aacgcgccgc cgcggtctta tcgcccttaa agcgcgccag tacatcctgt
     3721 aacgtgtgcg catccacggt tgaaggcgtc agctctgctg tgttcaccat aagctcaggt
     3781 aataactgcc gcataaattg cctgtccagc gttggtgcgg gatcgacgct taaaaaaagc
     3841 gccaggcgct ccatcatatt acgcagttcg cgaatattac cgggccagcc ccaggccagc
     3901 aaaagcggct gacactgtgt caatccatga cgtatcgatt cggtaaacgg aatttccatc
     3961 gccgccagcg actgttttaa aaagctttcc gccagcggca aaatatcagc ctgccgctcg
     4021 cgcaaaggag gaagcgtcag acgcagaata ctcaggcgat aaaagagatc ggggcgaaaa
     4081 cgtccttgca ttatctcccg atccagatcg caatgcgtag cgctgatcac ccggacatcc
     4141 accgggatcg gttggtgtcc gccgacgcga gtgacggctt tttcctccag tacgcgcaag
     4201 agtcgggttt gtaacggcaa gggcatttcg ccgatttcat ccagaaacag cgtgccgccg
     4261 tgtgcgattt caaacagccc cgcccggcct cctcgtcgtg aaccggtaaa cgcgccctct
     4321 tcataaccaa acagttccgc ctccagcaat gactcggtaa tcgcgccgca attgacggcg
     4381 acaaagggag gggatggctt attctgacgg tgaggctggc ggtgaaaaaa cgtctggtga
     4441 atcgcctgcg ccgccagctc ttttccggtc cctgtttccc cctgaatcag cactgccgca
     4501 cgggagcggg catagagcgt aatcgtctgg cggagctgct ccatttgcgg cgactggccg
     4561 cgtatatcgc ccagttcata ccgggtttgt aatcccttgc cggatgggta atccacgcgc
     4621 tggcgccgtg tcagacgggt catatccagc gcatcatgaa aagcctgacg aacggtcgcc
     4681 gcggaataaa taaagatggc ggtcataccc gcttcttccg ccagatcggt aattaatccc
     4741 gcgccgacga cggcctcaat accgttggcc ttaagttcgt taatttgccc gcgcgcgtcc
     4801 tcttcggtga catagcttcg ctgttcaaga cagaggtgaa acgttttctg aaaggcaagt
     4861 aaagtcggaa tggtctcctg ataggtcacg ataccgatag acgaggtgag ctttcccgct
     4921 ttcgctagcg cctgtaatac gtcgaatccg ctgggcttga tgaggatcac cggtattgac
     4981 aggcgacttt ttaaataggc cccgttcgaa cccgccgcga taatcgcgtc gcagcgctcg
     5041 gtcgccagtt ttttgcgaat gtaggtcacc gccttttcaa agccgagttg aataggcgtg
     5101 atggtcgcca gatgatcgaa ttccaggctg atatcccgaa acagttcgaa tagacgcgtt
     5161 acggagaccg tccagatcac cggtttatcg ctattatcgc gcggagcgct gtgagcagtc
     5221 gtcatcgcag taggttcatc tttaaggggc gattttttgt tttaaacgtg tttcataaat
     5281 gttgcaatga aacggagcga ttcgtttcat gaaacgttag ctgacacgtt tttcttttcc
     5341 cttaatcgcg cttattcata acaggaatga ctgtaattac ctgtttttaa atctcattgt
     5401 atttaatttt ctcgctgcct ctttgcctgg catagccttt gctttggtga atacatcttg
     5461 aataacaatt tactaacatg aggacgaatt atgtctttac attcgccggg gcaggcattt
     5521 cgcgccgcgc tcgctaaaga gaatccatta caaattgtcg gcgctattaa tgccaaccat
     5581 gctctgttgg cccaacgggc cgggtatcag gctatctatc tttctggcgg cggcgtagcg
     5641 gcgggctcgc tcggactgcc ggatctgggg atttcgacgc tggatgatgt gttaaccgat
     5701 atccggcgca tcacggatgt ttgcccgctg ccgctgttgg tggatgcgga tattggcttt
     5761 ggctcctccg cctttaatgt cgcgcggacg gtaaagtcca tagccaaagc gggcgccgcc
     5821 gcgctgcata ttgaagacca ggttggcgct aagcgctgtg gacaccgtcc aaacaaagcg
     5881 atcgtctcga aagaggagat ggtagacaga attcgggcgg cagtggatgc gcgcaccgat
     5941 ccgaactttg tgatcatggc gcgtaccgat gcgctggcgg tggaagggct ggaggcggct
     6001 ctcgatcgcg cgcaggctta cgtggatgcg ggggctgaca tgctgtt
//
LOCUS       DAGWFR010000209         6026 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.212, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000209 DAGWFR010000000
VERSION     DAGWFR010000209.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 6026)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6026)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6026
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.212"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..794)
                     /locus_tag="MOX77_004109"
     CDS             complement(<1..794)
                     /locus_tag="MOX77_004109"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HCA3359506.1"
                     /translation="MISLFDMFKVGIGPSSSHTVGPMKAGKQFVDDLVEKGLLDNVTR
                     VAVDVYGSLSLTGKGHHTDIAIIMGLAGNEPATVDIDSIPGFIRDVETRERLLLAQGR
                     HEVDFPKDDGMRFHNGNLPLHENGMQIHAWHDDTVIYSKTYYSIGGGFIVDEAHFGQE
                     ATNEVTVPYPFKSAKEMLEYCNSTGLSLSGMVMQNELALHSKKEIEEYFGHVWQTMQA
                     CIDRGMNTEGVLPGPLRVPRRASALRRMLVSSDKLSSDPMNVIDWV"
     gene            complement(1058..1636)
                     /locus_tag="MOX77_004110"
     CDS             complement(1058..1636)
                     /locus_tag="MOX77_004110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA pyrophosphatase"
                     /protein_id="HCA3359507.1"
                     /translation="MDTSRLTLDHFLSRFQLLRPQMTHETLNQRQAAVLIPVVRRPQP
                     GLLLTQRAIHLRKHAGQVAFPGGAVDSTDASLIAAALREAQEEVAIPPQAVEVIGVLP
                     PVDSVTGFQVTPVVGIIPPNLPWRASEDEVSAVFEMPLAQALQLGRYHPLDVYRRGNS
                     HRVWLSWYEHYFVWGMTANILRELALQIGVKP"
     gene            complement(1640..3004)
                     /gene="pabB"
                     /locus_tag="MOX77_004111"
     CDS             complement(1640..3004)
                     /gene="pabB"
                     /locus_tag="MOX77_004111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate synthase component 1"
                     /protein_id="HCA3359508.1"
                     /translation="MMKTLSPTVITLPWRPDAAEHYFAPVNHLPWAMLLHSGDAIHPY
                     NRFDILVADPVTTLTTRAQETTVCTARTTTVTLDDPLHVLQTQLEALPFHPQPDPDLP
                     FQGGALGLFGYDLGRRFEILPDTAARDIALPDMAIGLYDWALIVDHHKQVVSLISYHD
                     ADARYRWLTGQRAPTRTPFRLTSAWQSNMTRCEYGEKFRQVQAWLHSGDCYQVNLSQR
                     FQASYEGDEWQAFERLNRANRAPFSAFLRLHDGAILSLSPERFIQLENGHIQTRPIKG
                     TLPRLNDPQADRQQAQKLANSMKDRAENLMIVDLMRNDIGRVAVPGSVKVPELFVVEP
                     FPAVHHLVSTITARLPDSLHATDLLRAAFPGGSITGAPKVRAMEIIDELEPQRRNAWC
                     GSIGYLSFCGKMDTSITIRTVTATQGQLYCSAGGGIVADSNEEAEYQETFDKVNRILH
                     PLEN"
     gene            3085..3264
                     /locus_tag="MOX77_004112"
     CDS             3085..3264
                     /locus_tag="MOX77_004112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YoaH family protein"
                     /protein_id="HCA3359509.1"
                     /translation="MFAGLPSLSHEQQQKAVERIQELMSQGMSSGEAIAQVAGELRAN
                     HTGERIVARFEDEDE"
     gene            complement(3270..3614)
                     /locus_tag="MOX77_004113"
     CDS             complement(3270..3614)
                     /locus_tag="MOX77_004113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HCA3359510.1"
                     /translation="MSIVRIDAEDRWSDVVIYNNTLWYIGVPENLDADAFEQTANTLA
                     QIDAVLEKQGSSKSRILDATIFLSDKADFAAMNKAWDAWVVAGHAPVRCTVQAGLMNP
                     KYKVEIKIVAAV"
     gene            3746..5656
                     /locus_tag="MOX77_004114"
     CDS             3746..5656
                     /locus_tag="MOX77_004114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase"
                     /protein_id="HCA3359511.1"
                     /translation="MTDDFAADGQLAKAITGFKPREPQRQMAVAVTQAIENAQPLVVE
                     AGTGTGKTYAYLAPALRAGKKVIISTGSKALQDQLYSRDLPTVAKALAFTGKTALLKG
                     RSNYLCLERLEQQALAGGDLPVQTLSDVILLRSWSNQTRDGDISTCVSVAEDSQAWPL
                     VTSTNDNCLGSDCPLYKECFVVKARKKAMDADVVIVNHHLFLADMVVKESGFGELIPQ
                     AEVMIFDEAHQLPDIASQYFGQSLSSRQLLDLAKDITIAYRTELKDTQQLQKCADRLA
                     QSAQDFRLQLGEPGYRGNLRELLADSRIQRAFLLLDDTLELCYDVAKLSLGRSALLDA
                     AFERATLYRSRLKRLKEINQPGYSYWYECTSRHFTLALTPLTVADKFKEVMEQKPGSW
                     IFTSATLSVNDDLHHFTARLGIEQAESMLLPSPFDYTRQALLCVPRNLPQTNQPGAAR
                     QLAAMLRPIIEANNGRCFMLCTSHAMMRDLAEQFRATMTLPVLLQGETSKGQLLQQFV
                     SAGNALLVATSSFWEGVDVRGDTLSLVIIDKLPFTSPDDPLLKARMEDCRLRGGDPFD
                     EVQLPDAVITLKQGVGRLIRDADDRGVLVICDNRLVMRPYGATFLASLPPAPRTRDIA
                     RAVRFLAIPSAE"
     gene            5714..>6026
                     /gene="tsaB"
                     /locus_tag="MOX77_004115"
     CDS             5714..>6026
                     /gene="tsaB"
                     /locus_tag="MOX77_004115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HCA3359512.1"
                     /translation="MRILAIDTATEACSVALWNNGTINAHFELCPREHTQRILPMVQE
                     ILAASGASLNEIDALAFGRGPGSFTGVRIGIGIAQGLALGANLPMIGVSTLATMAQGA
                     WR"
BASE COUNT         1403 a         1615 c         1671 g         1337 t
ORIGIN      
        1 ttcacccagt caatgacgtt catcggatcg ctggaaagct tatcgctgga aaccagcata
       61 cgacgcagcg cagaggcgcg acgcggtacg cgcagcggcc ccggcagaac gccttcggta
      121 ttcataccgc gatcaataca agcctgcatg gtttgccaga cgtgaccgaa atactcttca
      181 atctctttct tgctatgcag cgccagttcg ttttgcatca ccatgccgga gagtgaaagg
      241 ccggtgctgt tgcaatactc cagcatttct ttcgccgatt taaacggata aggtacagta
      301 acctcattcg tcgcttcctg gccgaaatgc gcttcatcaa cgataaagcc gccgccgatg
      361 gaatagtacg tcttgctata aatgaccgtg tcgtcatgcc aggcgtggat ctgcatcccg
      421 ttttcatgca gcggcaaatt gccgttgtga aaacgcattc cgtcatcttt cgggaagtcg
      481 acttcgtgac gtccctgggc cagtaacaga cgctcgcgcg tttcgacgtc gcgaataaaa
      541 ccggggatac tatcaatatc cacggtagcg ggttcattac ccgccagacc cataataatg
      601 gcgatatcgg tatggtgacc tttccccgtc agcgacagcg agccgtagac atcgacagcg
      661 acgcgggtaa cgttatccag taatcctttt tcgactaggt catcgacgaa ctgtttaccg
      721 gccttcatcg ggccaacagt gtgggaagag gagggaccaa tccctacctt aaacatgtcg
      781 aataggctaa tcacgataat actcctgaca gggcaaccgg ggcttccggt tacgatgtta
      841 taactgcgca tagtgtaaga gggaacgctg gcatcagctt aactattcac atgaattaaa
      901 ctaatgaata accgcgtttt tactaatatt gcgacagtaa tctcaagtcg tgtcttgcgc
      961 gcgtaaagtt aagtatatac acgttgccct tcaggctgcc tctttggggg aggcgattgt
     1021 taccgccttg aggcaacgtg aatggcgttg tgtacagtca gggctttacg ccgatttgca
     1081 gcgccagctc acgaagaatg tttgcggtca tgccccagac gaaataatgc tcataccagg
     1141 agagccatac gcggtgcgaa ttgccgcgac ggtaaacatc aagcggatga tatcgaccca
     1201 gttgcaacgc ttgcgccagc ggcatttcaa acaccgcaga cacttcgtct tcactggcgc
     1261 gccaggggag atttggcgga ataatgccga ccaccggggt gacctgaaaa ccggtcacgc
     1321 tgtctaccgg cggtaaaacg ccaatcactt ccacggcttg cggcgggatg gcgacttcct
     1381 cctgcgcttc gcgaagcgct gcggcgataa gcgaagcatc ggtactgtcc acggccccgc
     1441 cgggaaaggc gacctgtccg gcgtgtttgc gcaaatgaat agcccgctgg gtcaacagca
     1501 gccccggctg ggggcggcga accacaggga tcagtacggc ggcctgacgt tgatttaacg
     1561 tttcatgagt catctgcggg cgcaaaagct gaaagcgcga taagaaatga tcgagcgtca
     1621 gacggctggt atccacgtat tagttctcca gtgggtgcag gatacgatta actttatcaa
     1681 aagtttcctg atattccgct tcttcgttgc tatcggccac gataccgccg ccggctgagc
     1741 aatagagttg gccctgcgtt gccgtgacgg tgcggatagt aatactggta tccatcttgc
     1801 cgcagaaact cagataaccg atgctaccgc accaggcgtt gcgtcgctgc ggctccagtt
     1861 cgtcgataat ttccattgcc cgcactttag gcgcgccggt aatggagccg ccggggaaag
     1921 ccgcgcgcag cagatcggtg gcatgaagcg agtctggtaa acgggcagta atggtgctaa
     1981 ccagatggtg aacggcagga aatggttcga cgacgaacag ttccggcact ttcaccgaac
     2041 ctggtacggc gacccggcca atgtcgttac gcatcaaatc gacaatcatc aaattttcag
     2101 cgcgatcttt cattgaatta gccagtttct gcgcctgctg acgatccgcc tgcggatcgt
     2161 taagccgtgg aagcgtacct ttgatcgggc gcgtctgaat atgaccgttc tccagttgga
     2221 taaaacgctc gggagaaagg ctcaatatgg cgccgtcatg taaacgaaga aaggcgctga
     2281 acggggcgcg atttgcgcgg ttaaggcgtt cgaaagcctg ccattcatca ccctcgtagc
     2341 tcgcctgaaa acgctgggaa agattgacct gatagcagtc cccgctgtgc agccaggcct
     2401 gcacctgacg aaacttctcg ccatactcgc aacgcgtcat attggattgc caggccgagg
     2461 taagcctgaa gggcgttcgg gtcggcgcgc gctggccggt gagccagcga tatcgggcgt
     2521 ctgcatcgtg atagcttatc agcgacacta cctgtttatg gtgatcgaca atcagcgccc
     2581 agtcgtaaag gccaatcgcc atatcgggta aagcgatatc gcgcgcggca gtatcgggca
     2641 gaatttcgaa acgccgccct aaatcataac caaacagacc cagcgcgccg ccctgaaagg
     2701 gtaagtcagg gtcaggctga ggatgaaaag gcagcgcctc cagttgagtc tgcaaaacgt
     2761 gtaacggatc gtcgagagtg acggtagtcg tgcgcgcagt acataccgtg gtttcctggg
     2821 cgcgcgtggt cagtgtggtg acaggatcgg cgaccagaat atcaaaacgg ttatagggat
     2881 gaatagcatc acctgaatgc agcagcatcg cccagggcaa atggtttacg ggcgcaaaat
     2941 agtgttcagc ggcgtccgga cgccagggta aggtgataac agtgggagat aacgtcttca
     3001 tcattcctga ctcgttacaa cactactggc ttaccgccgg gtagcgtgaa ataattagcg
     3061 ctaacaattt agcaggagtt aatcatgttt gcaggtttac cttcactcag tcatgaacaa
     3121 cagcaaaaag ccgtagaacg tatccaggaa ttgatgtcgc aaggtatgag tagcggagaa
     3181 gcgattgccc aggtggcagg cgaacttcgc gccaaccata ccggcgaacg gatagtggcg
     3241 cgttttgagg atgaagacga ataaccggct tataccgccg cgacaatctt aatctcaact
     3301 ttatatttcg ggttcatcaa cccggcctgt acggtacagc gtaccggcgc atggcctgcg
     3361 acgacccacg catcccacgc cttattcatg gcggcaaaat ccgctttatc gctcaggaaa
     3421 atagtggcat ccagaatacg tgacttactg gagccctgtt tttccagcac cgcatcaatt
     3481 tgcgccagag tattcgccgt ttgctcaaaa gcatcggcgt ccaggttttc cggcacgccg
     3541 atataccaca gcgtattatt gtagatcacc acgtctgacc aacgatcttc ggcatcaata
     3601 cgcacgatag acatcactta ttcctcattt gctttccatt tgaatggctc aagactgcca
     3661 caatgtggcg ccgccgtcac ctctgtaact ggcgtaagcc tttctaccct gacataatcc
     3721 cctgtgcaaa ttaacagggg gcagtgtgac ggacgatttt gcagcagatg gccaactggc
     3781 caaagcgata accggcttta aaccgcgcga accacagcga caaatggcgg ttgccgtgac
     3841 acaagcgatt gaaaatgcgc agcctttggt tgttgaagcc ggcaccggaa ccgggaagac
     3901 ctatgcttac ctcgctccgg cgttgcgcgc cgggaaaaaa gtcattattt cgaccgggtc
     3961 gaaagcgttg caggatcaac tctacagccg cgatctgccg acggtagcaa aagcgttggc
     4021 gtttaccggt aagacggccc tgttgaaagg acgttcaaac tacctctgcc tggagcgtct
     4081 ggaacaacaa gcgctggcgg gcggcgattt accggtacaa acgttaagcg acgtgatatt
     4141 gctgcgctcc tggtcaaatc agacgcggga tggcgatatc agcacctgcg tcagcgtggc
     4201 ggaggattcc caggcttggc cgctggtcac cagtaccaac gacaactgcc ttggcagcga
     4261 ttgtccgctt tacaaagagt gctttgtggt gaaagcgcgt aaaaaggcga tggacgcgga
     4321 tgtggtgatt gtaaaccacc acctttttct tgcggatatg gtggttaaag agagcgggtt
     4381 tggcgaactt atccctcagg ctgaagtaat gatcttcgat gaagcccacc aactgcctga
     4441 catcgccagc cagtatttcg gacaatcgct ctctagccgt cagttgctgg atttagcaaa
     4501 agacatcacc atcgcctacc ggacggaact gaaagacact caacagttgc aaaaatgcgc
     4561 cgatcgcctt gcccagagcg cccaggattt tcgtctgcaa ctgggggagc ccggctaccg
     4621 gggaaatttg cgtgaactgt tagccgactc tcgtatccaa cgggcatttt tactgctgga
     4681 tgatacgctg gagctttgtt acgacgtggc gaaactgtcg ctgggccgtt cggcgctgct
     4741 ggatgcggct tttgaacgcg ccacgctata ccgttcacgg ctgaaacgct taaaagagat
     4801 caatcagccg ggatacagct actggtatga gtgcacctcg cgccatttca ctctggcgct
     4861 gacgccgctc accgtggcgg acaaattcaa agaggtgatg gaacagaagc ccggtagctg
     4921 gatttttacc tcggccacgt tgtcggtaaa tgatgatctc caccacttta ccgcccgtct
     4981 gggaattgaa caggcagaat ccatgctgtt gcccagccca ttcgactata cgcgccaggc
     5041 gttactctgc gtaccgcgta acctaccgca aaccaaccag cccggcgcgg cgcgacagtt
     5101 ggcggctatg ctcaggccga ttatcgaagc caataacggg cgatgtttta tgctgtgcac
     5161 ctcacacgcc atgatgcgcg atctggcgga gcagtttcgc gccaccatga cgctgccggt
     5221 attgttgcaa ggggaaacca gtaaaggcca actgttacag caatttgtta gcgccggcaa
     5281 cgcgctgctc gtcgccacca gcagcttctg ggaaggggtg gacgtgcgcg gcgatacgtt
     5341 atctttggtg attatcgaca aattgccgtt tacttccccg gacgacccgc tgttaaaagc
     5401 gcgaatggaa gactgtcgtt tgcgcggtgg cgatccgttt gatgaggttc aactgcccga
     5461 tgcggtgatt acgctgaagc agggagtggg gcggctaatt cgcgatgcgg acgatcgcgg
     5521 ggtgttagtg atttgtgata accggctggt gatgcggccc tatggcgcca cgtttctcgc
     5581 cagcctgcct cctgcgccgc gcacgcgtga tatcgcccgt gccgttcgct ttcttgcgat
     5641 tccatccgcc gagtaatttg ttacggagta tggtaagatg cgcgctattt tattgatcta
     5701 agcacgaaac ctcatgcgaa ttctggctat cgataccgcc acagaggcct gttctgtcgc
     5761 cctgtggaac aacggtacta tcaatgctca ctttgagctt tgtccacgag aacacactca
     5821 acgtatcctg cccatggtgc aggagattct ggccgccagc ggcgcctcgc tcaatgagat
     5881 agatgcgctg gcgtttgggc gcggtccggg cagctttacc ggcgtgcgta tcggcattgg
     5941 gattgcgcaa gggctggcgt taggggcaaa tctgccgatg atcggtgttt cgacgcttgc
     6001 cacgatggcg cagggcgcat ggcgta
//
LOCUS       DAGWFR010000210         5997 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.213, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000210 DAGWFR010000000
VERSION     DAGWFR010000210.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 5997)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5997)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5997
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.213"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..406)
                     /locus_tag="MOX77_004116"
     CDS             complement(<1..406)
                     /locus_tag="MOX77_004116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HCA3359513.1"
                     /translation="MSIEIARIKKSFGRTQVLNDISLDIPSGQMVALLGPSGSGKTTL
                     LRIIAGLEHQSSGHIRFHGTDVSRLHARERKVGFVFQHYALFRHMTVFDNIAFGLTVL
                     PRRDRPTAAAIKTKVTQLLEMVQLAHLADRFPA"
     gene            complement(396..1271)
                     /gene="cysW"
                     /locus_tag="MOX77_004117"
     CDS             complement(396..1271)
                     /gene="cysW"
                     /locus_tag="MOX77_004117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/thiosulfate ABC transporter permease
                     CysW"
                     /protein_id="HCA3359514.1"
                     /translation="MAEVTQLKRYDVPRINWGKWFLIGVGMLVSAFILLVPMIYIFVQ
                     AFSKGLMPVLQNLADPDMLHAIWLTVLIALIAVPMNLVFGILLAWLVTRFNFPGRQLL
                     LTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDEHNLQMMFSWPGMVLVTIFVTCPF
                     VVRELVPVMLSQGSQEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEF
                     GAVSVVSGSIRGETLSLPLQIELLEQDYNTVGSFTAAALLTLMAIITLFLKSMLQWRL
                     ENQEKRAQQEENHEH"
     gene            complement(1271..2104)
                     /gene="cysT"
                     /locus_tag="MOX77_004118"
     CDS             complement(1271..2104)
                     /gene="cysT"
                     /locus_tag="MOX77_004118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000458418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/thiosulfate ABC transporter permease
                     CysT"
                     /protein_id="HCA3359515.1"
                     /translation="MLAVSSRRVLPGFTLSLGTSLLFVCLILLLPLSALVMQLSQMSW
                     SQYWDVVTNPQVVAAYKVTLLAAFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDL
                     PFALPTAVAGLTLASLFSVNGFYGQFLAQFDIKVTYTWLGIAVAMAFTSIPFVVRTVQ
                     PVLEELGPEYEEAAQTLGATRLQSFRKVVLPELSPALIAGVALSFTRSLGEFGAVIFI
                     AGNIAWKTEVTSLMIFVRLQEFDYPAASAIASVILAASLLLLFSINTLQSRFGRRVVG
                     H"
     gene            complement(2104..3120)
                     /gene="cysP"
                     /locus_tag="MOX77_004119"
     CDS             complement(2104..3120)
                     /gene="cysP"
                     /locus_tag="MOX77_004119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate/sulfate ABC transporter
                     substrate-binding protein CysP"
                     /protein_id="HCA3359516.1"
                     /translation="MAVNLLKKRLLTLAAMLLLAGQAQATELLNSSYDVSRELFAALN
                     PPFEQQWAKDNGGDKLTIKQSHAGSSKQALAILQGLKADVVTYNQVTDVQILHDKGKL
                     IPADWQSRLPNNSSPFYSTMGFLVRKGNPKNIHDWSDLVRSDVKLIFPNPKTSGNARY
                     TYLAAWGAADNADGGDKAKTEQFMTQFLKNVEVFDTGGRGATTTFAERGLGDVLISFE
                     SEVNNIRKQYEAQGFEVVIPKTNILAEFPVAWVDKYVKANGTEKAAKAYLNWLYSPQA
                     QTIITHYYYRVNNPEIMGKQADKFPQTGLFRVEDKFGTWPEVMKTHFASGGELDKLLA
                     AGRK"
     gene            complement(3278..4069)
                     /gene="ucpA"
                     /locus_tag="MOX77_004120"
     CDS             complement(3278..4069)
                     /gene="ucpA"
                     /locus_tag="MOX77_004120"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase UcpA"
                     /protein_id="HCA3359517.1"
                     /translation="MGKLTGKTALITGASQGIGEGIARVFARHGANLILLDISDEIEK
                     LADELGGRGHRCTAVKADVRDFASVQAAVARAKETEGRIDILVNNAGVCRLGNFLDMS
                     EEDRDFHIDINIKGVWNVTKAVLPEMIKRKDGRIVMMSSVTGDMVADPGETAYALSKA
                     AIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPDDPESVLTEMAKAIPL
                     RRLADPLEVGELAAFLASDESSYLTGTQNVIDGGSTLPESVSVGV"
     gene            complement(4306..5205)
                     /gene="yfeX"
                     /locus_tag="MOX77_004121"
     CDS             complement(4306..5205)
                     /gene="yfeX"
                     /locus_tag="MOX77_004121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphyrinogen peroxidase"
                     /protein_id="HCA3359518.1"
                     /translation="MSQVQSGILPEHCRAAIWIEANVKGDLDALRAASRTFADKLATF
                     EVKFPDAHLGAVVAFGNNTWRALSGGVGAEELKDFIPYGKGLAPATQYDVLIHILSLR
                     HDVNFSVAQAAMEAFGDCIDVKEEVHGFRWVEERDLSGFVDGTENPAGEETRREVAVI
                     KDGVDAGGSYVFVQRWEHNLKQLNRMSIHDQEMMIGRTKEANEEIDGDARPATSHLSR
                     VDLKEDGKGLKIVRQSLPYGTASGTHGLYFCAYCARLHNIEQQLLSMFGDTDGKRDAM
                     LRFTKPVTGGYYFAPSLDRLLAL"
     gene            complement(5300..5875)
                     /locus_tag="MOX77_004122"
     CDS             complement(5300..5875)
                     /locus_tag="MOX77_004122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RpoE-regulated lipoprotein"
                     /protein_id="HCA3359519.1"
                     /translation="MKSLRLTLLALPLALTGCSTLSSVNWSAANPWNWFGSSTEVTEQ
                     GVGALTAATPLEEPAIAEALDGDYRLRSGMKTDNGNVVRFFEAMKGDSVAMVINGEQG
                     TVSRIDVLDSDIPTAAGGKIGTPFSDLYSKAFGHCEPVSSDSHTSVECKAEGSQHISY
                     VFSGEWSGPEGLMPPDDVLKNWDVRKIIWRR"
BASE COUNT         1433 a         1720 c         1502 g         1342 t
ORIGIN      
        1 gggcggggaa gcgatccgcg aggtgcgcca gttgcaccat ctccagcaat tgcgtcactt
       61 tcgttttaat agccgccgca gttgggcggt cgcgtcgcgg cagcaccgtc aggccaaaag
      121 cgatgttgtc aaacaccgtc atatggcgaa acagcgcata gtgctgaaac acaaaaccga
      181 ctttacgctc acgcgcgtgc aggcggctaa cgtccgtacc gtggaaacga atatggccgc
      241 tggactgatg ttccagcccg gcaataatgc gcagcagcgt cgttttgccg gaaccagacg
      301 gccccaacaa ggcaaccatc tggccggaag gaatatccag cgagatatca ttcagtacct
      361 gagtgcgacc aaacgatttc ttaattctgg cgatctcaat gctcatgatt ttcctcctgt
      421 tgcgcgcgtt tttcctgatt ctccagacgc cattgcaaca tgctcttcaa aaacagggta
      481 ataatcgcca ttagcgtcaa caatgcggcg gcggtaaagg agccgacggt gttgtagtcc
      541 tgctccagta attcaatctg taacggtagc gataacgttt cgccgcgaat cgagccggac
      601 accaccgaca ccgcgccaaa ctcgccaatc gcgcgggcgt tggttaatac cacgccgtag
      661 agtagcgccc agcgaatatt cggcaacgtc acgcggcgaa acatttgcca gccggatgcg
      721 cccagtaaaa tcgccgcctc atcttcctgg ctgccctggc tgagcatcac tggcaccagt
      781 tcgcgcacca caaacgggca ggtgacaaaa atagtgacca gtaccatccc cggccaggag
      841 aacatcattt gcaaattatg ctcatccagc cagccgccca acgggccgtt ggaaccataa
      901 aacaacagat aaaccagacc ggccaccacc ggtgagacgg caaagggaat atccagcagg
      961 gtcagcagta gctgacgtcc ggggaagtta aagcgcgtca ccagccacgc cagcagaata
     1021 ccgaacacca gattcatcgg cactgcgatc aaggcaatca acaccgtcag ccagatggcg
     1081 tgcagcatgt ccggatcggc cagattttgc agtaccggca ttaacccttt gctgaacgcc
     1141 tgcacgaaga tgtaaatcat cggcaccagc aggataaagg ccgaaacgag catcccgacg
     1201 ccaatcaaaa accattttcc ccagttaata cgggggacgt cgtatcgctt caattgagtc
     1261 acttccgcca ttaatgacct accacacgtc gaccaaagcg actttgcaga gtgttaattg
     1321 agaacagcag cagcagtgat gccgcaagga tcaccgaggc aatggcgctg gcagctgggt
     1381 aatcaaactc ctgcaaacgc acaaaaatca tcagcgaggt cacttctgtt ttccaggcga
     1441 tatttccggc gataaaaatc accgcgccaa actcgcccag gctacgggta aaagagagcg
     1501 ccacgccggc aatcagcgca ggcgacagct caggcagcac gactttgcga aaactttgca
     1561 ggcgggtggc ccccagcgtt tgtgccgctt cttcatattc cggccccagc tcttccagta
     1621 ccggctggac ggtgcgcacc acaaatggaa tgctggtaaa ggccatcgcc accgcaatac
     1681 cgagccaggt ataggtcact ttgatatcaa actgcgcaag aaactgaccg tagaaaccgt
     1741 tcactgagaa cagcgaggcc agcgttaacc ccgccaccgc tgtcggcagc gcaaatggca
     1801 gatccatcag cgcatccagt aacgtgcgcc ctggaaaacg gtagcgggtt aaaatccacg
     1861 ccatcagcag gccaaacacg ccattaaaaa tcgacgccac aaatgccgcc agcagcgtca
     1921 ctttataagc agccaccacc tgtgggttgg tcacgacatc ccagtattgc gaccagctca
     1981 tctgtgagag ctgcatcacc agcgcgctca acggcaacag caggatcagg cagacaaaca
     2041 gcaaactggt gccgaggctt aacgtaaagc cgggcagcac gcgtcgggaa gaaacggcaa
     2101 gcattactta cgccccgccg ccaacagttt gtccagctcg ccgccgctgg caaagtgcgt
     2161 tttcatcacc tcaggccacg tgccaaactt gtcttccacg cggaacagtc cggtttgcgg
     2221 gaatttatct gcttgcttgc ccatgatttc cgggttattc acgcggtagt agtaatgggt
     2281 aatgatggtc tgcgcctgcg ggctatacag ccagttcagg taagctttgg cggctttttc
     2341 tgtgccgttg gccttcacgt atttatccac ccaggcaacc gggaattcag caagaatgtt
     2401 cgttttcggg atcaccactt caaatccctg ggcttcatat tgtttgcgga tgttgttcac
     2461 ttccgattca aaactaatca gcacatcgcc cagaccacgc tcggcaaagg tagtcgtagc
     2521 gccgcgaccg ccggtatcaa acacttcgac gtttttcagg aactgggtca taaactgttc
     2581 ggttttggct ttatcgccgc cgtccgcgtt atccgccgcg ccccatgccg ccagatacgt
     2641 gtaacgggcg ttgccggagg ttttcgggtt agggaaaatc agcttcacgt cggaacgtac
     2701 aagatcgctc cagtcgtgaa tatttttcgg gttccccttg cgcactagga agcccatagt
     2761 ggaatagaat ggcgaactgt tgttcggcag acggctttgc cagtcggcag ggatcagttt
     2821 gcctttatca tgaagaatct gtacgtcggt cacctgattg taggtcacga cgtctgcctt
     2881 cagtccctgc aaaatcgcca gcgcctgttt tgatgacccg gcatgagact gcttaatcgt
     2941 cagcttatcg ccgccgttat ccttcgccca ttgttgctca aacggcgggt taagggcggc
     3001 aaacagctcg cgggagacat cgtatgagct gttcagcagc tccgttgcct gcgcctgccc
     3061 tgccagtaac agcattgctg ccagcgtcag gagtctcttt ttcagtaagt taacggccat
     3121 tgcgcaccct tataaattta atgactttct tatggtcatc atatttataa ccagcgctaa
     3181 aggagtaacg gttttatata ccgtttgatg atttgaaagt tgaaaaggga ataagagaat
     3241 ccctccccac gcggcgtgag gaggagaccg gcatcaatca gacgcctacg cttacgcttt
     3301 caggcagggt actgccgcca tcaatgacgt tttgcgttcc ggtaagatag ctggactcat
     3361 cggaagccag aaatgccgcc agttccccta cttccagcgg atcggcaaga cggcgtagcg
     3421 gaatggcttt tgccatttcc gttaataccg attccggatc gtcagggtta gactgacggg
     3481 caatgctttc cgccatcggc gttcttacat aaccggggca aatggcattc acacgaatac
     3541 cggactgcgc gtactctacc gccagcgatt tggttaaacc gacaatggcg gcttttgaca
     3601 gcgcataggc cgtttcaccc gggtccgcca ccatatctcc cgtgacggaa gacatcatca
     3661 caatgcggcc atctttacgt ttgatcatct ccggcaggac ggctttggtg acgttccaga
     3721 cacctttaat attaatatca atgtggaaat cgcgatcttc ttcactcata tcgaggaagt
     3781 tgcccagacg gcacacgcca gcgttattca ccaaaatatc aattctacct tcagtctctt
     3841 tggcgcgcgc aaccgccgcc tgcaccgaag caaaatctct gacgtcggct ttaacggcag
     3901 tacagcgatg cccgcgcccg cccagctcat ccgccagctt ttcaatctca tcggagatat
     3961 ccagcaagat taagttcgcg ccgtggcgtg cgaatacgcg agcgatccct tcgccaatgc
     4021 cctgcgatgc gcccgtaatc aatgctgtct tgcccgtgag tttacccatt ttcaatgtct
     4081 ccttttgaat atggagtctt acactccatt aacactgaaa atacagtaat aacaaataag
     4141 tgctgaggaa tagctcacta attcaggtaa atattaggta aaaaaatccc cgcggaggcg
     4201 gggatgggca tttttatgct gttctgcctg atggcgcggc gcttgtcagg cctaccaatc
     4261 gtaggtcgaa taaagcgttt gcgctgccat ccgacagggt tttacttata gcgctaacag
     4321 gcgatccagc gacggcgcaa aatagtagcc gccagtcacc ggtttggtga agcgcagcat
     4381 tgcgtcgcgt ttaccgtcgg tatcgccgaa catactcaga agctgctgtt cgatattgtg
     4441 caggcgtgcg cagtaagcgc agaaatagag accatgagta ccgctggcgg tgccgtatgg
     4501 caggctctga cgcacaatct tcagcccttt gccatcttct ttgagatcga cgcggctcag
     4561 gtgagatgtt gccggacgcg catcgccgtc aatctcttca ttggcttctt tggtacgccc
     4621 gatcatcatc tcctgatcgt gaatactcat ccggttaagt tgcttgagat tgtgttccca
     4681 acgctgcacg aacacataac tgccgccggc atccacgcca tctttgatca ccgccacttc
     4741 acgacgcgtc tcttcgcccg ccgggttctc tgtcccgtcg acaaagccgc tcagatcgcg
     4801 ttcttccacc caacggaagc cgtgaacttc ttctttcacg tcgatacagt cgccgaaggc
     4861 ttccatcgcc gcctgagcaa cagaaaaatt cacatcgtgg cgcagggaaa ggatatggat
     4921 cagcacgtca tactgcgtgg ctggcgccag ccctttacca taaggaataa aatctttcag
     4981 ttcttccgcc ccgacgccgc cactcagggc acgccaggta ttgttgccaa acgccacaac
     5041 ggccccaaga tgggcgtccg gaaatttgac ttcgaaggtc gccagtttat cggcaaatgt
     5101 tctgctggcc gcgcgcaggg cgtccaggtc gccttttaca ttggcttcaa tccaaattgc
     5161 cgcacggcaa tgttccggca aaatgccact ttgaacctga gacatgattc ctcctgaaaa
     5221 tgagaatgcc acgcagtcgt ggcattaatg gaggttattt taccttgttt ttaagcgaag
     5281 cggtttgttc aggcgcaaat taacgacgcc agataatttt gcgcacgtcc cagtttttta
     5341 agacgtcatc aggaggcatt aagccttccg gtccgctcca ctcgccggag aaaacatagc
     5401 taatatgctg acttccctcg gctttacatt cgacgctggt atggctatcg ctggaaaccg
     5461 gctcgcagtg accaaacgct ttgctgtaaa ggtcgctaaa cggcgtaccg attttgcccc
     5521 ccgcggcggt tgggatatcg ctgtccagca catcaatacg gctcacggtt ccctgctcgc
     5581 cgttgatcac catcgcgacg ctgtcgccct tcatcgcttc gaaaaagcgc accacgttgc
     5641 cgttatcggt tttcataccg ctacgcaggc gataatcgcc atctaatgcc tctgcaatag
     5701 ccggctcttc cagcggcgtg gcggcggtca gcgctcccac gccttgctca gtgacttctg
     5761 tcgaggaacc aaaccagttc catggatttg cggcagacca gttgaccgag gagagcgtcg
     5821 agcagccggt cagcgccagc ggcagtgcga gtaaagtcaa acgcagcgat ttcatctcac
     5881 ttcctttctt ttattaatta acgttggttg gagtacgggt tcgccaaaaa gtgccgttat
     5941 tctttctcaa gggaaaaaca ggcacgcaaa cgttgattgg ttaacagcca gatcagc
//
LOCUS       DAGWFR010000211         5959 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.214, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000211 DAGWFR010000000
VERSION     DAGWFR010000211.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 5959)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5959)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5959
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.214"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..1000)
                     /locus_tag="MOX77_004123"
     CDS             complement(<1..1000)
                     /locus_tag="MOX77_004123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate transporter"
                     /protein_id="HCA3359520.1"
                     /translation="MPLVIVAIGVILLLLLMIRFKMNGFIALVLVALAVGLMQGMPLD
                     KVIGSIKAGVGGTLGSLALIMGFGAMLGKMLADCGGAQRIATTLIAKFGKKHIQWAVV
                     LTGFTVGFALFYEVGFVLMLPLVFTIAAAANIPLLYVGVPMAAALSVTHGFLPPHPGP
                     TAIATIFHADMGKTLLFGTILAIPTVILAGPVYARFLKGIDKPIPEGLYSAKTFTEEE
                     MPGFGVSVWTSLVPVILMAMRAVAEMILPKGHAFLPVAEFLGDPVMATLIAVLIAMFT
                     FGLNRGRSMDQINDTLVSSIKIIAMMLLIIGGGGAFKQVLVDSGVDKYIASMMHETN"
     gene            complement(1377..1952)
                     /gene="nfuA"
                     /locus_tag="MOX77_004124"
     CDS             complement(1377..1952)
                     /gene="nfuA"
                     /locus_tag="MOX77_004124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016942932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S biogenesis protein NfuA"
                     /protein_id="HCA3359521.1"
                     /translation="MIRISDAAQAHFAKLLANQKEGTQIRVFVINPGTPNAECGVSYC
                     PPDAVEATDTALKFDLLTAYVDELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA
                     DDAPLMERVEYALQSQINPQLAGHGGRVSLMEITDEGYAILQFGGGCNGCSMVDVTLK
                     EGIEKQLLNEFPELKGVRDLTEHQRGEHSYY"
     gene            complement(2011..2694)
                     /gene="gntX"
                     /locus_tag="MOX77_004125"
     CDS             complement(2011..2694)
                     /gene="gntX"
                     /locus_tag="MOX77_004125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA utilization protein GntX"
                     /protein_id="HCA3359522.1"
                     /translation="MLTVPGLCWLCRMPLALSHWGICSVCARAVRQRVSLCPQCGLPA
                     GHPSLPCGRCLQKPPPWQRLVSVSDYTPPLSLLVHQLKFTRRSEIAAALARLLLQEVL
                     MARRSTGLPLPDRIVSVPLWSRRHWRRGFNQSDLLCQPLAHWLGCAWDSQTITRVRAT
                     ATQHHLSARLRKRNLKNAFRLELPVQGLHMVIVDDVVTTGSTVAEIAQLLLRNGAATV
                     QVWCLCRTL"
     gene            2732..3502
                     /gene="bioH"
                     /locus_tag="MOX77_004126"
     CDS             2732..3502
                     /gene="bioH"
                     /locus_tag="MOX77_004126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pimeloyl-ACP methyl ester esterase BioH"
                     /protein_id="HCA3359523.1"
                     /translation="MNDIWWQTYGEGNCHLVLLHGWGLNAEVWHCIREELGSHFTLHL
                     VDLPGYGRSSGFGAMTLEEMTAQVAKNAPDQAIWLGWSLGGLVASQMALTHPERVQAL
                     VTVASSPCFSAREGWPGIKPEILGGFQQQLSDDFQRTVERFLALQTLGTETARQDART
                     LKSVVLAQPMPDVEVLNGGLEILKTVDLREALKNVNMPFLRLYGYLDGLVPRKIAPLL
                     DTLWPHSTSQIMAKAAHAPFISHPAAFCQALMTLKSSL"
     gene            complement(3538..4464)
                     /locus_tag="MOX77_004127"
     CDS             complement(3538..4464)
                     /locus_tag="MOX77_004127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rpn family recombination-promoting
                     nuclease/putative transposase"
                     /protein_id="HCA3359524.1"
                     /translation="MATSTTSTPHDAVFKQFLCHPDTARDFLEIHLPSTLRQICNLNT
                     LRLESGSFIEEDLRPHYSDILWSLETSEGDGYIYVVIEHQSTPDAHMAFRLMRYAMAA
                     MQRHLEAGHKTLPLVVPMLFYHGNRSPYPFSLCWLDEFADPVMARKLYATAFPLVDIT
                     VVPDDEIMRHRRVALLELIQKHIRQRDLMGLVEQLVALLVKGYANDTQLQSLFNYMMH
                     TGDAARFNTFIRQVAMRIPQHKEKIMTIAERLRQEGHRNGLQKGLQQGKQEGQRLAAL
                     RIARSMLNDGFDRDTVLRVTGLAPADLASESH"
     gene            complement(4699..4935)
                     /gene="feoC"
                     /locus_tag="MOX77_004128"
     CDS             complement(4699..4935)
                     /gene="feoC"
                     /locus_tag="MOX77_004128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="[Fe-S]-dependent transcriptional repressor FeoC"
                     /protein_id="HCA3359525.1"
                     /translation="MASLIQVRDLLALRGRMEATQISHTLHAPQPMIDAMLNQLEIMG
                     KAVRIPEEPDGCLSGSCKSCPEGKACLREWWALR"
     gene            complement(4948..>5959)
                     /gene="feoB"
                     /locus_tag="MOX77_004129"
     CDS             complement(4948..>5959)
                     /gene="feoB"
                     /locus_tag="MOX77_004129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Fe(2+) transporter permease subunit FeoB"
                     /protein_id="HCA3359526.1"
                     /translation="AIFAVFAAAFFGQNGALAVFSLYVLGIVMAVLTGLMLKHTIMRG
                     EASPFVMELPVYHVPHIKSLIIQTWQRLKGFVLRAGKVIIIVSIFLSAFNSFSLSGKI
                     VDNINDSALASVSRVITPVFKPIGVHEDNWQATVGLFTGAMAKEVVVGTLNTLYTAEN
                     IQDEAFNPADFHLGDELLGAVDDTWQSLKDTFSLSVLANPIEASKGDGEMATGAMGVM
                     DQKFGSAAAAYSYLIFVLLYVPCISVMGAIARESSRGWMSFSILWGLNIAYSLATLFY
                     QVTSFSQHPTYSLICILAVIVFNVVVLSLLRRARSRVDIELLATRKSVTSCCSGTAGN
                     CH"
BASE COUNT         1403 a         1590 c         1677 g         1289 t
ORIGIN      
        1 cattggtttc atgcatcatt gaagcgatgt atttatccac gccgctatcg accagcacct
       61 gcttgaacgc gccgccgccg ccgatgatca gcagcatcat ggcgataatt ttgatggaag
      121 agaccagcgt atcgttaatc tgatccattg aacgcccgcg gttcaggcca aaggtgaaca
      181 ttgcaatcag tacggcaatc aacgtagcca ttaccgggtc gcccaggaac tcggcaacgg
      241 gcaggaaagc gtggcctttt ggcagaatca tctcggcaac cgcacgcatc gccatcagaa
      301 tcaccggaac cagcgacgtc cagacgctga cgccaaagcc cggcatctct tcttccgtaa
      361 aggttttcgc gctgtacagg ccttccggga tcggcttatc gatgcctttc agaaaacggg
      421 cgtaaaccgg tccggcaagg atcacggtcg ggatcgccag aatcgtacca aacagcagcg
      481 ttttacccat atcggcatgg aaaatcgtgg cgatcgcggt tggacccggg tgcggcggca
      541 ggaagccgtg tgtgacggag agcgccgcgg ccatcggcac gccgacgtac agtaacggga
      601 tattcgccgc tgcggcaatg gtgaatacca gcggcagcat cagaacgaag cccacttcat
      661 agaacagagc gaagccgacg gtaaagccgg ttaacactac ggcccactga atatgctttt
      721 taccaaattt cgcgatcagg gtagtggcga tacgttgagc gccgccgcag tcggcaagca
      781 ttttgcccag catggcgccg aaccccataa tcagggccag actgccaagc gtaccgccga
      841 caccggcttt gatggagccg atgactttat ccagcggcat tccctgcatc aacccgacag
      901 cgagcgctac caggacaagg gcgataaatc cgttcatttt gaagcggatc atcagaagaa
      961 gtaacaagat aacaccgata gcaacgatga ctaatggcat gatttacctg gcctttactt
     1021 tgttatgggt aacgtcattg tttcgacgac aaattcctgt tgttcccgac gggaacagag
     1081 tcgcaatagc accaatactg attaccgttg aaacgaatga gcgtagtcag atgttatatg
     1141 gatgttaggt gcccataaga atgatacggg taacatatgg gtgttgaaaa tgaccctggc
     1201 aggcaaaatt taaattatga gacacaggtc atgttatcgg cgaaagaaga agaaccattg
     1261 ttctgagatg tggctgatgg cgcagaatgg cggcgtagac gccttattcg gcctacggtg
     1321 gggcagacaa ggcccgacag gcgcaagcgc catcgggcat ggatgcgggg aaaatcttag
     1381 tagtatgagt gctcgccgcg ctggtgttcg gtcagatcgc gaaccccttt cagttccggg
     1441 aattcattca gcaactgttt ctcgatccct tctttcagcg tgacgtcaac catcgagcaa
     1501 ccgttacaac cgccgccaaa ctgcagaatt gcatagcctt catcggtaat ttccatcagc
     1561 gagacgcgac cgccgtggcc cgccaactgc gggttaatct gcgattgcag agcatattcc
     1621 acgcgctcca tcagcggcgc gtcatcggcc actttgcgca tcttcgcgtt tggcgctttc
     1681 aatgtgagtt gagaacctag ctggtcggtc acgaaatcaa tttccgcgtc ttccagatag
     1741 ggcgcgctca gctcgtcgac ataagcggtc aacaggtcaa atttcagtgc agtatcggtg
     1801 gcttctacgg cgtcgggcgg acaataagaa acgccgcact ctgcgttagg agtgccggga
     1861 ttaatgacaa atacgcggat ttgcgtccct tctttctgat ttgccagcag tttggcaaag
     1921 tgcgcttgtg cagcatcgga aatacggatc atagtaatgg cctaatagtt gactatttta
     1981 gttggttata atacgcccgt catcgaggct ctacaaggtt cgacacaggc accatacctg
     2041 gacagtcgct gcgccgttgc gcaaaagcag ttgcgcgatt tccgcgacgg tacttccggt
     2101 agtgacgaca tcatccacaa taaccatatg gagaccctgt accggcaatt caaggcgaaa
     2161 cgcgtttttc aaattgcgct tacgtaacct ggcgctgaga tgatgttgtg ttgcggtcgc
     2221 ccgtacccgc gtgatggtct ggctgtccca cgcgcagccc agccagtgcg ctaacggttg
     2281 gcataacaga tcgctttggt taaatccccg ccgccagtgt cggcgcgacc agagcggaac
     2341 gctgacgatt ctgtcgggaa gcggcaagcc agtgctgcgg cgcgccataa gtacttcctg
     2401 caacagtaga cgcgccagag cggcggcaat ttcgctgcgg cgggtaaatt taagctgatg
     2461 caccagtaaa ctcaagggcg gcgtatagtc actgacgctc accagacgct gccagggcgg
     2521 cggtttttgc aggcagcgac cgcaggggag cgaaggatgc ccggcaggta atccgcattg
     2581 cggacacagg ctgacgcgct gacgaacggc gcgcgcgcat acggagcaaa tcccccagtg
     2641 gcttaacgcc agcggcattc ggcatagcca gcataatccc ggtactgtta gcataggtgc
     2701 atccttgtta gacaaaagag aacagtaact gatgaatgac atctggtggc agacctacgg
     2761 cgagggaaat tgtcatcttg tgctgctgca cggatgggga ttgaacgcgg aggtgtggca
     2821 ttgcattcgc gaggaactcg gctcgcattt tacgctgcat ctggtcgact tgccgggcta
     2881 tggccgtagt tcggggtttg gtgccatgac gcttgaagag atgacggcgc aggtagcgaa
     2941 aaacgcgccg gaccaggcta tctggcttgg ctggagtctg ggcggcctgg tggcgagtca
     3001 gatggcgctc acccaccctg aacgcgttca ggcgctggtg acagtcgcct cttcgccatg
     3061 ctttagcgcg cgtgaggggt ggccgggaat aaaaccagaa atcctcggcg gattccagca
     3121 gcagcttagc gacgattttc agcgcacggt ggagcgtttt ctggcgctgc aaacgttagg
     3181 gacggagacg gcgcgtcagg atgcccgcac cttaaaaagc gtagtgctgg cgcagcctat
     3241 gccggatgta gaggtgctca atggcggact ggaaatctta aaaacggtcg atctacgaga
     3301 agcgcttaaa aatgtgaaca tgccgttttt gcgtttgtat ggttatctgg acggtctggt
     3361 gccgcgtaaa atcgcgcctt tgctcgatac gttatggccg cacagtacat cacagataat
     3421 ggcgaaggcg gcccatgcgc cgtttatctc gcatccggcg gcgttttgcc aggcgctgat
     3481 gacgctaaaa tcatcgctgt aaccagggcg ttgccgggcc caggccattc tgccagatta
     3541 atggctttca gacgccagat cggcaggcgc cagcccggta accctaagca cagtatcgcg
     3601 atcgaaacca tcgtttagca tggagcgggc aatgcgcaat gcggcgagcc gttggccttc
     3661 ctgtttgcct tgttgtagcc ctttctgtaa cccgttacga tgtccttcct gacgtaatct
     3721 ttctgcgata gtcatgatct tctccttatg ctgtgggata cgcatagcca cctggcggat
     3781 aaacgtattg aagcgcgcgg cgtcgccagt gtgcatcatg taattaaaca gactttgaag
     3841 ctgggtgtca ttagcgtatc ccttaaccag cagggcgacc agctgttcga caagccccat
     3901 cagatcacgc tggcggatgt gtttttgtat gagttccagc agcgcgaccc gtcggtgccg
     3961 cataatctcg tcgtccggca cgaccgtaat atcgaccaga ggaaaggcgg tggcgtatag
     4021 cttacgcgcc atcaccgggt cggcaaattc atccagccag cataatgaga acggatacgg
     4081 gcttcggttt ccgtggtaaa acagcattgg caccactaat ggcaacgtct tatgcccggc
     4141 ctccaggtgc cgttgcattg cagccattgc gtaacgcatc agccgaaatg ccatatgcgc
     4201 gtccggcgta ctctgatgtt caataaccac gtaaatgtaa ccgtcacctt cacttgtttc
     4261 cagcgaccaa aggatatcgg aataatgggg gcgtaaatcc tcttcaataa agctaccgga
     4321 ctccagccgt aacgtattca gattacagat ttgacgtaat gtcgacggaa gatggatttc
     4381 caaaaaatcc cgtgcagtat cggggtggca taaaaactgt ttgaataccg cgtcatgcgg
     4441 cgtggatgtt gttgaggtcg ccatatcgat ccgtcaccgg tgaagctcaa tggcgtgaca
     4501 ctacgcgcag accgggctga ttgcagtaga ggattagtgc gcttgcgagg cgcgtgggga
     4561 gataaatgcg cacggcggta acgctttcat ctttgtggaa ggcatgacgc aaaattgccc
     4621 ggcagcgtga cgcgtaccgg gcaatataac gcgggataaa ggccggataa gacgcgttac
     4681 gtcgctaccc ggcgaaggtc aacgcaaggc ccaccattcg cgcaggcagg ctttaccttc
     4741 cggacagctt ttacaactgc ctgaaaggca accgtccggt tcttccggga tacgtaccgc
     4801 tttacccatg atctccagtt gattcagcat ggcgtcgatc atgggctgcg gagcgtgcag
     4861 cgtatggctg atctgcgttg cctccatacg cccccgcagc gccagtagat cgcgaacctg
     4921 tatcaatgaa gccatttttt acatccctta gtgacaattg cccgcagtgc ccgaacaaca
     4981 ggatgtgacg cttttgcggg ttgccagcag ttcaatgtct acacggctgc gggcgcggcg
     5041 tagcagactt aataccacaa cgttaaagac gattaccgcc agaatacaga tcaggctgta
     5101 agtcgggtgc tgactgaagc tagtaacctg gtagaacagc gtggcgagcg aataggcgat
     5161 attcagcccc cacaggatgg agaagctcat ccagccgcgg ctggactcgc gggcgatagc
     5221 gcccattacc gagatacacg gtacgtaaag caggacgaaa atcaggtaac tgtacgccgc
     5281 cgcggcgctg ccgaattttt gatccatcac gcccatcgcg ccggtcgcca tttcgccgtc
     5341 gcctttactc gcttcgatcg ggttagccag tacgctcagg ctaaaggtgt ctttcaggct
     5401 ttgccaggta tcgtcaaccg cgcccagcag ttcatcgccg aggtgaaagt cggcaggatt
     5461 aaacgcttcg tcctgaatat tttcggcggt gtagagcgtg ttcagcgtac cgacgacaac
     5521 ctctttcgcc atggcgcccg taaacagacc cacggtagct tgccagttat cctcatggac
     5581 gccgatcggt ttaaagactg gcgtgatgac ccggcttaca gaggcgaggg cggagtcatt
     5641 aatgttatcg acgattttgc cgctcagcga gaaactgtta aacgcgctca ggaaaatact
     5701 cacgatgata atgactttac cggcgcgtag tacaaaacct ttcaggcgtt gccaggtctg
     5761 gatgatcagg ctcttgatat gcggtacgtg gtaaaccggc agctccatca caaacggaga
     5821 ggcttcgcca cgcataatgg tatgtttcag catcaggccg gttaataccg ccatgacaat
     5881 acccagcacg tatagcgaga agaccgccag cgcgccgttt tgcccgaaga aggcggcggc
     5941 aaagacggcg aaaatcgcc
//
LOCUS       DAGWFR010000212         5913 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.215, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000212 DAGWFR010000000
VERSION     DAGWFR010000212.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 5913)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5913)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5913
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.215"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..318
                     /locus_tag="MOX77_004130"
     CDS             <1..318
                     /locus_tag="MOX77_004130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HCA3359527.1"
                     /translation="MKPTADKLAVELAKITFSAPTVPVVNNVDVKCETDAAAIRDALV
                     RQLYNPVQWTKSVEFIAAQGVEHLYEVGPGKVLTGLTKRIVDTLTASALNEPAALSAA
                     LTQ"
     gene            331..1065
                     /gene="fabG"
                     /locus_tag="MOX77_004131"
     CDS             331..1065
                     /gene="fabG"
                     /locus_tag="MOX77_004131"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HCA3359528.1"
                     /translation="MSFEGKIALVTGASRGIGRAIAETLVARGAKVIGTATSENGAKN
                     ISDYLGANGKGLMLNVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDE
                     WNDIIETNLSSVFRLSKAVMRAMMKKRCGRIITIGSVVGTMGNAGQANYAAAKAGLIG
                     FSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIASA
                     VAFLASDEASYITGETLHVNGGMYMV"
     gene            1221..1457
                     /gene="acpP"
                     /locus_tag="MOX77_004132"
     CDS             1221..1457
                     /gene="acpP"
                     /locus_tag="MOX77_004132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016535861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HCA3359529.1"
                     /translation="MSTIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELV
                     MALEEEFDTEIPDEEAEKITTVQAAIDYINGHQA"
     gene            1543..2784
                     /gene="fabF"
                     /locus_tag="MOX77_004133"
     CDS             1543..2784
                     /gene="fabF"
                     /locus_tag="MOX77_004133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HCA3359530.1"
                     /translation="MSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTS
                     AYATKFAGLVKDFNCDDIISRKEQRKMDAFIQYGIVAGVQAMQDSGLEVTEENASRIG
                     AAIGSGIGGLGLIEENHSSLVKGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISI
                     ATACTSGVHNIGHAARIIAYGDADAMVAGGAEKASTPLGVGGFGAARALSTRNDNPQA
                     ASRPWDKERDGFVLGDGAGMLVLEEYEHAKARSAKIYAEIVGFGMSSDAYHMTSPPEN
                     GAGAALAMVNALRDAAIEPAQIGYVNAHGTSTPAGDKAETQAVKSVFGDAASRVMVSS
                     TKSMTGHLLGAAGAVESIFSILALRDQAIPPTINLDNPDEGCDLDFVPHEARQVSDLE
                     YALCNSFGFGGTNGSLIFKKI"
     gene            2908..3717
                     /gene="pabC"
                     /locus_tag="MOX77_004134"
     CDS             2908..3717
                     /gene="pabC"
                     /locus_tag="MOX77_004134"
                     /EC_number="4.1.3.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate lyase"
                     /protein_id="HCA3359531.1"
                     /translation="MFLINGHAQDQLAVSDRATQFGDGSFTTARIVDGNICHLEAHLQ
                     RLQVACEKLRIAFSHWSTLRQEMTMLATGHDSGVLKVIISRGSGGRGYSAMNCQAATR
                     ILSVSAYPAYYSQWRKQGITLTLSPIPLGRNPYLAGLKHLNRLEQVLIRSHLEQTDAD
                     EALVLDSEGWVTECCAANLFWRTGDIVFTPRLDQAGVNGIMRQFCLRQLAQSPFQVLE
                     VQAREEAVRQADEIIICNALMPIIPIRAYHGTSYSSRTLFQFLAPFCEHPN"
     gene            3720..4736
                     /gene="yceG"
                     /locus_tag="MOX77_004135"
     CDS             3720..4736
                     /gene="yceG"
                     /locus_tag="MOX77_004135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein YceG"
                     /protein_id="HCA3359532.1"
                     /translation="MKKLSGVFLLLLVVLGIATGVGMWKVRHLANSTLLIKNETIFTL
                     KAGTGRLALGDQLYDEKIINRPRVFQWLLRVEPELSHFKAGTYRFTPGMTVREMLELL
                     ESGKEAQFPLRFVEGMRLSDYLKQLREAPYIRHTLPDDDYATVAQALKLAHPEWVEGW
                     FWPDTWMYTANTSDVAILKRAHQKMVKAVDTVWKGRAEGLPYKDQNQLVTMASIIEKE
                     TAVASERDQVASVFINRLRIGMRLQTDPTVIYGMGTSYNGNLSRADLEKPTAYNTYTI
                     TGLPPGPIASPSEASLQAAAHPAKTPYLYFVADGKGGHTFNTNLASHNRSVQEKVLKE
                     KNGQ"
     gene            4726..5367
                     /locus_tag="MOX77_004136"
     CDS             4726..5367
                     /locus_tag="MOX77_004136"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HCA3359533.1"
                     /translation="MGSNYIVIEGLEGAGKTTARDVVVETLEQLGIRNMIFTREPGGT
                     QLAEKLRSLVLDIRSVGDEVITDKAEVLMFYAARVQLVETVIKPALAQGVWVIGDRHD
                     LSTQAYQGGGRGIDQTMLATLRDAVLGDFRPDLTLYLDVTPEVGLKRARARGDLDRIE
                     QESFDFFNRTRARYLELAAQDSRIRTIDATQPLDAVMRDIRATVTKWVQEQAA"
     gene            5364..>5913
                     /gene="holB"
                     /locus_tag="MOX77_004137"
     CDS             5364..>5913
                     /gene="holB"
                     /locus_tag="MOX77_004137"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HCA3359534.1"
                     /translation="MKWYPWLRPAYEKLVESYQAGRGHHALLIQALPGMGDEALCYAL
                     SRYLLCQQPEGHKSCGHCRGCQLMQAGTHPDYYTLTPDKGKSSLGVDAVREVSEKLYE
                     HSRLGGAKVVWIADAALLTDAAANALLKTLEEPPEQTWFFLASPEPARLLATLRSRCR
                     LHHLAPPSESYAMSWLSREVTAS"
BASE COUNT         1381 a         1422 c         1718 g         1392 t
ORIGIN      
        1 atgaaaccaa cggcagataa gctggcggtt gaattagcca aaattacctt tagcgcgcca
       61 acggtgccgg tagtaaacaa cgttgacgtg aaatgtgaaa ccgatgccgc cgctatccgc
      121 gatgcgctgg ttcgccagtt gtacaatccg gtacagtgga cgaagagcgt ggaatttatc
      181 gcggcgcagg gcgttgaaca tctttatgaa gtgggtccag gtaaagtcct cactggtctg
      241 acgaaacgta ttgtcgacac cctgacagcg tcggcgctga acgagccggc ggcgctgtct
      301 gcggcactta cgcaataaaa gaggaaaacc atgagctttg aaggaaagat tgcgctggtg
      361 actggtgcaa gccgtggcat aggccgcgca attgcagaga ctctcgttgc ccgcggcgcg
      421 aaagttatcg ggactgcgac cagtgaaaat ggtgcgaaga acattagcga ctatttaggt
      481 gctaacggga aaggtttgat gttgaatgtg accgatcctg catctattga atctgttctg
      541 gaaaatattc gcgcagaatt tggtgaagtg gatatcctgg ttaataatgc cggtatcact
      601 cgtgataatc tgttgatgcg aatgaaagat gatgagtgga acgatattat cgaaaccaat
      661 ttatcatccg ttttccgcct gtcaaaagcg gtaatgcgcg ctatgatgaa aaagcgttgt
      721 ggtcgcatta tcactattgg ttctgtggtt ggtaccatgg gaaatgcagg tcaggcaaac
      781 tacgctgcgg cgaaagcggg cctgatcggt ttcagtaaat cactggcgcg tgaagttgcg
      841 tcccgtggta ttactgtcaa tgttgtggct ccgggtttta ttgaaacgga catgacgcgt
      901 gcgctgtctg acgatcagcg tgcgggtatc ctggcgcagg tgcctgcggg tcgcctcggc
      961 ggcgctcagg aaatcgccag tgcggttgca tttttagcct ctgacgaagc gagttacatc
     1021 actggtgaga ctctgcacgt caacggcgga atgtacatgg tttaatcacg attgaaaaat
     1081 atttgcgtta ttagggcgaa aggccgcaaa ataacgtaaa atcgtggtaa gacctgccgg
     1141 gatttagttg caaatttttc aacattttat acactacgaa aaccatcgcg aaagcgagtt
     1201 ttgataggaa atttaagagt atgagcacta tcgaagaacg cgttaagaaa attatcggcg
     1261 aacagctggg cgttaagcag gaagaagtaa ccaacaatgc ttctttcgtt gaagacctgg
     1321 gcgcagattc tcttgacacc gttgagctgg taatggctct ggaagaagag tttgatactg
     1381 agattccgga cgaagaagct gagaaaatca ccaccgttca ggctgccatt gattacatca
     1441 acggccacca ggcgtaagtg aacatctcca ggcggtcgtt cgaccgcctg agttttatct
     1501 ttttgtccca ctagaatcat tttccctccc tggaggacaa ccgtgtctaa gcgtcgtgta
     1561 gttgtgaccg gacttggcat gttgtctcct gtcggcaata ccgtagagtc tacctggaaa
     1621 gctctccttg ccggtcagag tggcatcagc ctgatcgacc atttcgatac tagcgcctat
     1681 gcaacgaaat ttgctggctt agtaaaggat tttaactgtg atgacattat ctcgcgcaaa
     1741 gaacagcgca agatggatgc cttcattcaa tatggaattg tcgctggcgt acaggccatg
     1801 caggattctg gccttgaagt gacggaagag aacgcaagcc gtattggcgc cgctatcggc
     1861 tccggtatcg gtggtctcgg tctgatcgaa gaaaaccaca gttcgctggt aaaaggcgga
     1921 ccgcgtaaga ttagcccgtt ctttgtcccg tcgacgattg ttaacatggt agcaggccat
     1981 ctgactatca tgtatggcct gcgtgggcca agcatctcta ttgcgactgc ctgtacttca
     2041 ggcgtgcata acatcggcca tgccgcgcgt atcatcgcct atggtgatgc ggacgcgatg
     2101 gtggcaggtg gcgcagaaaa agccagtacg ccgctgggcg taggtggttt tggcgcagcg
     2161 cgcgcgctgt cgacccgcaa cgataaccca caggcggcga gccgtccgtg ggataaagaa
     2221 cgcgatggtt ttgtactggg cgacggtgcc ggtatgttgg tgcttgaaga gtacgaacat
     2281 gcaaaagcgc gtagtgcgaa aatctatgct gaaatcgtcg gctttggtat gagcagcgat
     2341 gcttaccata tgacgtcgcc gccggaaaat ggcgcaggcg ctgcgctggc gatggttaac
     2401 gcgttgcgtg atgccgcgat tgagcctgct cagattggct acgtcaacgc gcacggcacg
     2461 tcgacgcctg ccggcgacaa agctgagacg caggcggtta agtcagtctt tggcgatgct
     2521 gcaagccgag tgatggtgag ctcgaccaaa tcgatgaccg gccatctgtt gggcgccgca
     2581 ggcgcagtag agtctatttt ctctattctg gcgctacgcg atcaggccat tccgccaacc
     2641 attaatctgg ataacccgga tgaaggttgc gatctggact tcgtgccgca tgaagcgcgc
     2701 caggtcagcg atctggagta cgcgctgtgt aactcctttg gctttggcgg aactaacggt
     2761 tccttgatct ttaaaaagat ctaagttaag ccagagacag acattaataa aaaggtccgc
     2821 ttgtcgggcc ttttttatca ggcatatcac ctcttgttct gcgttattca tcctgccaca
     2881 ctagcaggcg acggataagg agccactatg tttttaatta atggccatgc gcaggatcaa
     2941 cttgctgtaa gcgaccgggc gacgcagttc ggcgatggca gttttacgac cgcacgtatt
     3001 gttgatggca acatttgcca tctggaagcg catcttcagc gcttgcaggt tgcctgtgaa
     3061 aaattacgga tcgcttttag ccattggtcg acccttcggc aagagatgac aatgttggcc
     3121 acagggcatg attcaggcgt gttgaaagtg atcattagcc gtggtagcgg cggccgggga
     3181 tacagcgcca tgaattgtca ggcagctacc cgaatcctct ccgtttctgc ttatcccgct
     3241 tattattctc agtggcgtaa gcaaggcatc actcttaccc ttagtcccat accgcttggg
     3301 cgcaatcctt atcttgccgg attaaaacat ctgaaccgcc tcgaacaggt gttgattcgc
     3361 tctcatcttg agcagacgga cgccgatgag gcgctggttc ttgacagcga gggatgggtt
     3421 acggaatgct gtgcggctaa tttgttctgg cgtacaggcg acattgtttt tacgccgcgt
     3481 ctggatcagg ccggggtgaa cggcattatg cgacaatttt gtttacgcca actggcgcaa
     3541 tctcctttcc aggttcttga agtacaggcg agagaggagg cagtcaggca ggcggatgag
     3601 attatcatct gcaacgcgct aatgccgatt attcccatac gcgcctatca cgggacgtcg
     3661 tattcttcgc gaacactgtt tcaattttta gccccatttt gtgagcatcc gaattagtta
     3721 tgaaaaaatt gtcaggcgtt ttccttctgc tgttggttgt gctgggtatt gccacgggcg
     3781 tggggatgtg gaaagttcgc catctggcga acagcacgtt acttattaaa aacgagacta
     3841 tctttacgct caaggcggga acgggtcggc tggcgcttgg tgaccagctt tatgatgaaa
     3901 aaatcattaa tcgtccccgg gtatttcagt ggctgctgcg cgtggagcct gagttatcgc
     3961 actttaaagc gggaacttac cgttttacgc ccgggatgac cgtacgggag atgcttgagt
     4021 tgctggagag cggcaaagaa gcgcaattcc cgttgcggtt tgtggaaggg atgcgcctta
     4081 gcgattacct gaaacagtta cgagaggcgc cgtatattcg ccatacattg ccggatgatg
     4141 actacgccac tgtcgctcag gcattaaagc ttgcgcaccc ggaatgggta gaagggtggt
     4201 tctggcctga tacctggatg tataccgcca acaccagcga tgtcgctatt ctcaagcgag
     4261 cgcaccaaaa gatggtgaaa gctgtcgata ctgtctggaa aggtcgggcc gaggggctgc
     4321 cttataaaga tcagaaccaa ctggtgacaa tggcctcgat tattgaaaaa gagacggctg
     4381 tcgccagcga acgcgatcag gtggcctcag tctttattaa tcgcctgaga atcggtatgc
     4441 gccttcagac cgatcccacc gtgatttacg ggatggggac gagttataat ggtaacttgt
     4501 cgcgtgcgga tctggaaaag ccgacggctt ataacacgta taccataacc gggctgccgc
     4561 caggaccgat tgcatcgccc agcgaagcgt cattgcaggc ggcggcgcat ccggcgaaaa
     4621 cgccgtatct ctattttgtg gccgacggta aaggcggcca cacatttaac accaatcttg
     4681 ccagccataa tcggtcagtg caggagaaag tgcttaagga aaaaaatggg cagtaattat
     4741 atcgtcatcg agggcctgga aggcgccgga aaaaccactg cgcgcgacgt ggtggtggag
     4801 acccttgagc aactgggtat tcgtaacatg atttttaccc gtgagccggg cggtacgcag
     4861 cttgccgaaa aactaagaag tctggtgctg gatatccgat cggtaggcga cgaagtgatt
     4921 accgataaag cggaagtgct gatgttttat gccgctcgcg tacagctcgt cgaaacggta
     4981 atcaaacccg cgctggcgca aggcgtatgg gtgatcggcg atcgccacga tctctcgacc
     5041 caggcgtatc aggggggagg gcgcggcatt gatcaaacca tgctggcgac actacgcgat
     5101 gccgtgctgg gcgattttcg tcctgacctg acgctgtatc tggatgtcac gccggaagtc
     5161 gggctaaaac gcgccagagc gcgcggcgat ttggatcgca ttgagcagga atcttttgat
     5221 ttctttaacc ggactcgcgc gcgctatctg gaactggcgg cgcaagactc gcgtatccgc
     5281 accattgacg cgacccagcc gctggatgcc gtcatgcgcg acattcgcgc cacggtgacg
     5341 aagtgggtgc aggagcaagc ggcatgaaat ggtatccatg gttacggccc gcctatgaaa
     5401 aactggtaga aagttaccag gcgggacgtg ggcaccatgc gctactgatt caggccttac
     5461 ctggcatggg cgacgaggcg ctgtgctatg cgctgagccg ttatctgtta tgccagcagc
     5521 ctgagggcca caaaagctgt gggcattgcc gtggctgtca gcttatgcag gctggcacgc
     5581 atccggacta ttacacgctg acgccggata aaggcaaaag cagccttggt gtagatgcgg
     5641 tacgcgaggt cagcgagaaa ttgtacgagc actcccgtct gggtggtgcg aaggtggtgt
     5701 ggattgcgga tgcggcgcta ttaaccgacg ccgccgccaa tgcgttgctc aaaacgctgg
     5761 aagagccgcc ggagcaaacc tggtttttcc ttgccagccc ggagcctgct cgtctgttgg
     5821 cgacattacg cagccgttgt cggctgcatc atctggcgcc gccgtccgaa tcgtatgcga
     5881 tgtcatggct gtcgcgagaa gtgacggcgt cac
//
LOCUS       DAGWFR010000213         5879 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.216, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000213 DAGWFR010000000
VERSION     DAGWFR010000213.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 5879)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5879)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5879
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.216"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..865)
                     /gene="hutI"
                     /locus_tag="MOX77_004138"
     CDS             complement(<1..865)
                     /gene="hutI"
                     /locus_tag="MOX77_004138"
                     /EC_number="3.5.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazolonepropionase"
                     /protein_id="HCA3359535.1"
                     /translation="MRQLLPGDTVWRNIRLATMDPQRQAPYGLVDSQALIVREGHICD
                     IVPETQLPVSGDNIHDMQGRLVTPGLIDCHTHLVFAGNRAAEWEQRLNGASYQHISAQ
                     GGGINATVSATRACAEETLYLLARERMMRLASEGVTLLEIKSGYGLELATEEKLLRVA
                     AKLAAENAIDISPTLLAAHATPAEYRDDPDGYITLVCETMIPQLWQKGLFDAVDLFCE
                     SVGFNVAQSERVLQTAKALGIPVKGHVEQLSLLGGAQLVSRYQGLSADHIEYLDEAGV
                     AAMRDGGTVGVL"
     gene            1103..2386
                     /locus_tag="MOX77_004139"
     CDS             1103..2386
                     /locus_tag="MOX77_004139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative acyl-CoA thioester hydrolase"
                     /protein_id="HCA3359536.1"
                     /translation="MNTLSVSRLALALAFGVTLSACSSTPPDQIPSDQTAPGTASRPI
                     LSANEAKNFVAARYFASLTPNTAPWSPSPITLPAQPDFVVGPAGTPGVTHTSIQAAID
                     AAMVKRTNKRQYIAIMPGDYQGTVYVPAAPGSLTLYGTGEKPIDVKIGMAIDGEMSVA
                     DWRRAVNPGGKYMPGKPAWYMFDNCQSKHAATIGVMCSAAFWSQNNGLQLQNLTIENT
                     LGDSVDAGNHPAVALRTDGDKVQINKVNILGRQNTFFVTNSGVQNRLQTDRQPRTLVT
                     NSYIEGDVDMVSGRGAVVFDNTNFQVVNSRTQQEAYVFAPATLSNIYYGFLAINSRFN
                     ASGDGVAQLGRSLDVDANTNGQVVIRDSVINEGFNVAKPWADAVISKRPFAGNTGTVD
                     DKDEVQRNLNDTNYNRMWEYNNRGVGSKVVTEPKQ"
     gene            complement(2530..3525)
                     /gene="pgl"
                     /locus_tag="MOX77_004140"
     CDS             complement(2530..3525)
                     /gene="pgl"
                     /locus_tag="MOX77_004140"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HCA3359537.1"
                     /translation="MKQTVYTASPESQQIHVWSLNHEGTLTLVQVVDVPGQVQPMVVS
                     PDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSPTHISTDHHGRFVFVGSYN
                     AGNVSVTRLQDGLPVELVDVVEGLDGCHSANITPDNRTLWVPALKQDRICLFTLSDDG
                     HLVAQEPAEVNTVEGAGPRHMVFHPNRQYAYCVNELNSSVDVWQLKNPHGEIECVQTL
                     DMMPADFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSVEGFQPTEAQ
                     PRGFNIDNSRKYLIAAGQKSHHIAVYEITGTQGLLTEKGRYAVGQGPMWVVVNAY"
     gene            3689..4507
                     /locus_tag="MOX77_004141"
     CDS             3689..4507
                     /locus_tag="MOX77_004141"
                     /EC_number="3.1.3.74"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphatase"
                     /protein_id="HCA3359538.1"
                     /translation="MTARVIALDLDGTLLTPHKTLLPSSLEALSRAKEAGFQLIIVTG
                     RHHVAIHPFYQALALETPAICCNGTYLYDYQAKTVLDADPMPVDKALQLIDLLDEHQI
                     HGLMYVDDAMLYEHPTGHVVRTSRWAQTLPPEQRPTFTQVSSLAQAARDVNAVWKFAL
                     TDEDIPRLQRFGQHVEQALGLECEWSWHDQVDIARKGNSKGKRLTQWIEAQGGSMKNV
                     IAFGDNYNDISMLEAAGTGVAMGNADEAVKARADFVIGDNTTDSIAKFIYTHLL"
     gene            complement(4508..5566)
                     /gene="modC"
                     /locus_tag="MOX77_004142"
     CDS             complement(4508..5566)
                     /gene="modC"
                     /locus_tag="MOX77_004142"
                     /EC_number="7.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum ABC transporter ATP-binding protein
                     ModC"
                     /protein_id="HCA3359539.1"
                     /translation="MLELNFSQTLGTHCLTLNETLPASGITAIFGVSGAGKTSLINAI
                     SGLTRPRKGRIVLNGRVLHDAENGICLTPEKRRIGYVFQDARLFPHYKVRGNLRYGMA
                     KSMTGQFDKLVSLLGIEALLDRLPGSLSGGEKQRVAIGRALLTAPELLLLDEPLASLD
                     IPRKRELLPYLQRLAREINIPMLYVSHSLDEILHLADKVMVLEDGQVKAFGPLEEVWG
                     SSVMHPWLPKEQQSSILKVSVLEHHPHYAMTALALGDQHLWVNKLNQPLQSTLRIRIQ
                     ASDVSLVLQPPQQTSIRNVLRAKVANCYDDNGQVEVQLEIGGRTLWARISPWARDELN
                     IKPGLWLYAQVKSVSITA"
     gene            complement(5569..>5879)
                     /locus_tag="MOX77_004143"
     CDS             complement(5569..>5879)
                     /locus_tag="MOX77_004143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HCA3359540.1"
                     /translation="TLGAGRWRVFLTITLPLTLPGIIVGTVLAFARSLGEFGATITFV
                     SNIPGETRTIPSAMYTLIQTPGGESAAARLCVISIVLALISLLISEWLARISRERTGR
                     "
BASE COUNT         1332 a         1707 c         1541 g         1299 t
ORIGIN      
        1 acaacacgcc gacagtaccg ccgtcacgca tcgccgcgac gcccgcttca tcaagatatt
       61 cgatatgatc cgccgataaa ccctgataac gactcaccag ctgcgcgccg cccaacagcg
      121 aaagctgctc aacatggcct ttaacgggaa tacctaacgc cttcgccgtc tgcaacacgc
      181 gctcactctg ggccacatta aagccgacgc tctcgcaaaa gaggtctacc gcatcaaata
      241 accctttttg ccagagctgc ggaatcatcg tctcgcagac cagagtgatg tagccgtccg
      301 ggtcgtcacg atactccgct ggcgtagcat gagcggccaa tagcgtgggg ctaatgtcga
      361 tagcgttttc ggcagcaagt tttgcagcga cgcgcaacag cttttcttct gtcgccagct
      421 ccagaccata gccggattta atctccagca gcgtaacgcc ttcgctggca aggcgcatca
      481 tgcgttcgcg cgccagcagg tagagcgtct cctccgcaca ggcgcgggtt gctgataccg
      541 tcgcgttaat gccgccgccc tgagcgctaa tatgctggta tgacgcgccg ttaagccgct
      601 gctcccactc tgcggcgcgg ttaccggcaa acaccagatg cgtgtggcaa tcgataagtc
      661 ccggggttac cagtcgtccc tgcatatcat ggatattgtc cccactgaca ggaagctgcg
      721 tctctggcac gatatcgcaa atatgccctt cgcgtacaat cagcgcctgg ctatccacca
      781 gcccgtacgg ggcttgccgc tgcgggtcca ttgtcgccag cctgatgttt cgccagacag
      841 tatcgcccgg taaaagttgc cgcattcctg tcgctctctt gcctgtcatg agttgtatag
      901 acatttattt tctttctgct ccggattgtc aactcaaagc gcgaaagttg ttgcttaatt
      961 gtgataaaac tatctgatgc tacaggtgtt tccagcctga aaaggaactt tttacctttt
     1021 cgccttcccg tttcgttcaa cttagtataa aaaagcaggc ttcaatggat gtcatttaac
     1081 tttttcaagc ccggagcaac ctgtgaatac attatcggtt tcccgtctgg cgctggcact
     1141 ggcttttggc gtgacgctga gcgcctgtag ctctacgcca cccgatcaga tcccttccga
     1201 tcaaaccgcg cctggcaccg cctcgcgccc cattctgtcg gcaaatgaag cgaaaaactt
     1261 cgttgctgcg cgctattttg cctccctgac gccgaatacc gccccgtggt cgccgtcgcc
     1321 gattaccctg cccgcacagc ctgactttgt ggtggggccg gcaggtacgc caggcgttac
     1381 gcacacctcg attcaggccg cgatcgatgc ggcaatggtt aaacgcacga acaaacgcca
     1441 gtacattgct attatgccgg gcgactatca ggggaccgtg tatgttcccg ccgcgccggg
     1501 aagtctgacc ctgtacggga ccggtgaaaa accgatcgat gtaaaaattg ggatggcgat
     1561 tgatggtgaa atgagtgtcg ctgactggcg ccgcgcagtg aatcccggcg ggaaatatat
     1621 gcctggtaaa cccgcctggt atatgttcga taactgccaa agcaaacacg ccgcgacgat
     1681 cggtgtaatg tgttctgccg cgttctggtc gcagaataac ggtctgcagc tacaaaatct
     1741 gaccatcgag aacacgctgg gcgacagtgt cgatgccgga aaccatccgg cggtggcgct
     1801 gcgtaccgat ggcgacaaag tccagattaa caaggtcaat atccttggcc gccagaacac
     1861 cttctttgtg accaacagcg gcgtgcagaa ccgtctgcaa accgatcgcc agccgcgtac
     1921 gctggtgacg aacagctata ttgaaggcga tgtggatatg gtttccggac gcggcgccgt
     1981 ggtgttcgat aacaccaact tccaggtcgt caactcccgc acacagcagg aagcctacgt
     2041 cttcgccccg gcgacgctgt ccaatattta ctatggcttt ttggcgatca acagccgctt
     2101 taacgcctcc ggcgatggcg ttgcgcagct tggccgctcg ctggatgtcg acgccaacac
     2161 caacggtcag gtcgtgatcc gcgacagcgt gattaacgag ggcttcaacg ttgccaaacc
     2221 gtgggccgac gcggtcatct cgaaacgtcc gtttgctgga aatacgggaa ccgtggatga
     2281 caaagacgag gtgcagcgta atctgaacga cacgaactac aaccgcatgt gggaatacaa
     2341 caaccgcggt gtaggcagta aagtagtgac ggaacctaag cagtaatcgc cgttccggtt
     2401 caggcttata aacgggccgc cgcagcagat gtggcggccc gtggttttac tgcaagcgat
     2461 gtttattgaa attaatcagg catcctgccc tggtgagctc cagcccgccg ccctccggca
     2521 cacagcgctt tagtacgcgt tcaccacaac ccacattggc ccctggccga cggcataacg
     2581 gcctttttcc gtcagcaacc cctgagtgcc cgtaatttca tagaccgcga tatgatgtga
     2641 tttttgaccc gcagcaatca ggtatttcct gctgttgtcg atattaaagc cgcgcggttg
     2701 ggcttccgtc ggctggaagc cttcaacgct cagtacgctg ccatcttcgg agacactaaa
     2761 gacggtaatc agactggcgg tgcggtcaca ggcatacaga tgccgtccat ccggcgtaat
     2821 atgaatatcc gccgcccagc gggtatcgga aaaatcggcg ggcatcatat ccagggtttg
     2881 tacgcactct atctcgccat gcggattttt aagctgccag acatccaccg aactgttcag
     2941 ttcattgacg caatacgcat attgtcgatt cgggtggaag accatatgac gcgggcctgc
     3001 cccttcaact gtatttactt ccgccggctc ctgggccacc agatggccgt catcgcttag
     3061 cgtaaacaga caaatgcgat cctgttttag cgcaggcacc cacagggtac ggttatccgg
     3121 cgtaatattt gccgagtggc agccgtccag cccttccacc acatccacca gctcaaccgg
     3181 caggccatcc tgtaagcgcg tcacgctgac attaccggcg ttatacgatc cgacaaagac
     3241 aaaacgacca tgatgatcgg tagaaatatg ggtcgggcta cccggcaggg cggattcggc
     3301 ggcaaacgtc agcgcgccat catccggcgc aatacgatac gccaggacac gaaactccgg
     3361 gcgcacgccg acatagaggt agcgtttatc cggactgacc accatcggct gaacctgacc
     3421 gggcacatcc acgacctgca ccagcgtcag cgtcccttcg tggttcaggc tccagacgtg
     3481 aatttgctga ctctcagggc tggcggtata gactgtttgt ttcatgaata ctcctttgca
     3541 tatggcatgt agctgcaata acaggacaca gcttaacgta gtcgcttttg acggcgaatg
     3601 ctgaattcag acgcagaatt ttgtctgctt accgtcccgg tgtaccatgc cgacagacgg
     3661 aattattact cttaatctgg aaaaaattat gactgcacgc gtgattgccc tcgatttaga
     3721 cggaacatta ttaaccccgc ataaaacctt actcccctcc tcgcttgaag cgctatcacg
     3781 cgccaaagag gcgggctttc aacttatcat tgtcactggt cgccatcacg ttgctattca
     3841 tcctttttat caggcgctgg cgctggaaac acctgctatt tgctgcaacg gcacctattt
     3901 gtatgattat caagctaaaa ctgtcctgga tgccgatcct atgcccgtgg ataaggcgtt
     3961 gcagttgatt gatttactgg atgagcatca gattcacggc ctgatgtatg ttgatgacgc
     4021 tatgctttac gaacacccaa ccggtcacgt cgtgcgtacc tcccggtggg cgcagacctt
     4081 gccgccggag caacgtccga cctttacaca ggtctcttcg ttggcgcagg cggcgcgcga
     4141 cgtgaatgcc gtgtggaagt ttgcgcttac cgatgaagat attcccagac tacagcggtt
     4201 cggtcagcat gttgaacagg cgcttggcct ggagtgtgaa tggtcatggc acgatcaggt
     4261 ggatatcgcg cgcaaaggca acagtaaagg caagcgcctt acccagtgga tagaagcgca
     4321 gggagggtca atgaaaaatg tgatcgcttt cggcgataac tacaacgaca tcagtatgct
     4381 ggaggcggca ggcaccggcg ttgcgatggg caacgccgat gaggcggtga aagcgcgcgc
     4441 tgactttgtg atcggcgata acactaccga tagcatcgcc aaatttatat acacccacct
     4501 gctatagtca ggcggtgata gaaacgcttt tcacctgcgc gtaaagccac aggccaggct
     4561 tgatattcag ctcatccctg gcccacgggc ttattcgcgc ccacagcgtt ctgccgccta
     4621 tttcaagctg gacttccacc tgcccgttat cgtcataaca attcgccact tttgcccgta
     4681 atacgttgcg gatactggtc tgctgcggcg gctgtagtac cagcgagaca tccgacgcct
     4741 gtatacgaat acgcagtgtg gattgcagcg gctgattgag tttatttacc cacaggtgct
     4801 ggtcgccaag cgccagagcg gtcatggcat aatgcgggtg atgctccagc acgctgactt
     4861 tcagaatact gctctgttgc tctttcggca gccacgggtg cataacgctg cttccccaga
     4921 cttcttccag cgggccaaac gctttaacct gtccatcctc cagcaccatg actttatccg
     4981 ccaggtggag aatttcatcg agagaatggc tgacatacag catgggaata ttgatttctc
     5041 gcgccagccg ttgcaggtac ggcagtaatt cgcgtttacg cgggatatcc agcgaggcca
     5101 acggttcgtc caacagcagc aactccgggg cggtgagcaa tgcccggcct atcgctacgc
     5161 gctgtttttc tccgccggac aggctccccg gcaggcgatc aagcaacgct tcaattccca
     5221 gcagcgacac cagcttatca aactgaccgg tcatgctttt cgccatgcca tagcgcaaat
     5281 tgccgcgtac tttgtaatgg gggaacaggc gcgcatcctg gaaaacataa ccgatgcggc
     5341 gcttttccgg cgttaaacag ataccgtttt ccgcgtcatg caacacccgg ccattcagca
     5401 cgatgcgtcc ttttcgcggg cgagtcaaac cgctgatggc attaatcagc gaggtttttc
     5461 ccgcgccgga gacgccaaag atagccgtga tcccactggc tggcagcgtt tcgttgaggg
     5521 ttaaacagtg cgttcccagc gtctgggaaa aattaagctc cagcatggtt agcgccccgt
     5581 ccgttcacgg ctaatccgcg ccagccattc agaaatcaac agcgaaatca gcgctaatac
     5641 aatcgaaatc acgcacagcc tcgccgccgc gctctccccg cccggcgtct ggatcaaggt
     5701 atacatggcg gaaggtatgg tgcgggtttc gcccggaata ttggaaacaa aggtaatggt
     5761 cgcgccaaat tcgccaagcg aacgggcaaa cgccagcacc gtaccaacaa taatacccgg
     5821 cagggtaagc ggtaaggtga tagtcagaaa aacgcgccag cgcccggcgc ccagcgttc
//
LOCUS       DAGWFR010000214         5871 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.217, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000214 DAGWFR010000000
VERSION     DAGWFR010000214.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 5871)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5871)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5871
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.217"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(1..932)
                     /locus_tag="MOX77_004144"
                     /pseudo
     CDS             complement(1..932)
                     /locus_tag="MOX77_004144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460742.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase small subunit"
     gene            1427..2692
                     /locus_tag="MOX77_004145"
     CDS             1427..2692
                     /locus_tag="MOX77_004145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4427 domain-containing protein"
                     /protein_id="HCA3359541.1"
                     /translation="MKNNIRFDLSDYLIHFFRDVDLETGSHIYLPEHCGFNNQHHACS
                     IDAKYLLRLSLRSHKIFSSWSYRNGQRTVYGDSPVVCFTDMPIAAYLETGVRRLERNE
                     NIGLYAIVLPKEQMFNYGARPVIYGLDQHNNARCSQGRYGERILDETALPLIEQYRYV
                     TYVPGKIDWTHEREWRWPYRGDIKKFLNHIKEYGIPENIESTPGFDFRSSEISGAGII
                     VPFAEDIPTVAHDILTLIDRGVIGRNTFKFIIAVESLQSWTQLSEPGALLSYINDNTF
                     EFESFFDLSASKVKNYADSINDYVSELYSKKDFLNDNYAMEFGNAWVWIHDNQSQVVR
                     ALLQAGMIKVNKEGRYLLDVNLASVDWPLRRKEAFASHVAGWLKHRFDIEAGRYSVRG
                     KDDYDAIPSYETPLKDQHPFYNHTVNVDW"
     gene            complement(2851..3942)
                     /gene="ychF"
                     /locus_tag="MOX77_004146"
     CDS             complement(2851..3942)
                     /gene="ychF"
                     /locus_tag="MOX77_004146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001538644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HCA3359542.1"
                     /translation="MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVV
                     PMPDPRLDQLAEIVKPQRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGH
                     VVRCFENDNIIHVAGKVNPAEDIDVINTELALADLDTCERAIHRVQKKAKGGDKDAKA
                     ELAALEKCLPHLAEAGMLRSLDLTDEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPY
                     LDQVREIAAKEGSVVVPVCAAVEADIAELDDDERDEFMAELGLEEPGLNRVIRAGYRL
                     LNLQTYFTAGVKEVRAWTIPVGATAPQAAGKIHTDFEKGFIRAQTIAFDDFITYKGEQ
                     GAKEAGKMRAEGKDYIVKDGDIMNFLFNV"
     gene            complement(4059..4643)
                     /gene="pth"
                     /locus_tag="MOX77_004147"
     CDS             complement(4059..4643)
                     /gene="pth"
                     /locus_tag="MOX77_004147"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002910438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HCA3359543.1"
                     /translation="MAIKLIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPK
                     FFGYTSRITLEGEDVRLLVPTTFMNLSGKAVGAMASFYRIQPDEILVAHDELDLPPGV
                     AKFKLGGGHGGHNGLKDIISKLGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQK
                     LIDEAIDEAARCTELWFKEGLAKATSRLHTFKAQ"
     gene            4919..5140
                     /gene="ychH"
                     /locus_tag="MOX77_004148"
     CDS             4919..5140
                     /gene="ychH"
                     /locus_tag="MOX77_004148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress-induced protein YchH"
                     /protein_id="HCA3359544.1"
                     /translation="MKRKNASLFGNVLMGLGLVVMVVGVGYSILNQLPQFNLPQFFAH
                     GAILSIFVGAVLWLAGARVGGHEQVSDKY"
     gene            complement(5242..>5871)
                     /locus_tag="MOX77_004149"
     CDS             complement(5242..>5871)
                     /locus_tag="MOX77_004149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001525165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HCA3359545.1"
                     /translation="AVIHAILVILALLVLAPLLSWLPLSAMAALLLMVAWNMSEAHKV
                     VDLLRHAPKDDIIVMLLCMSLTVLFDMVIAISVGIVLASLLFMRRIARMTRLAPVNVD
                     VPEDVLVLRVIGPLFFAAAEGLFTDLESRIKGKRIVVLKWDAVPVLDAGGLDAFQRFV
                     KRLPEGCELRISNLEFQPLRTMARAGIKPIPGRLTFFPNRTEALADLLS"
BASE COUNT         1511 a         1375 c         1451 g         1534 t
ORIGIN      
        1 cggctataaa acgagccgcg atcccagaaa ccattttctg aacatcccag acatccgtga
       61 ccggactgga taggaaagga gacgccgtca ttccagcgtg tggaggagca ggcgttatag
      121 gtggttggcc ctttacagcc catcttgtac aggcagtatc ccttgcgggc ggcgtcatca
      181 tcccagctct cgacaaattc accggcatca aaatgggcgc gacggtagca tttatcgtgg
      241 atacgctgac catagaacat cagtggacgg cccatgcgat cgagttccgg cagacgatca
      301 aacgtcacca tataggtgat aatggcgctc atgacatccg ggattggtgg acatccaggg
      361 actttcacga tcggcttgtc ggtgatcact ttatcgatag gcgttgcctg ggtcggattg
      421 gggcgggcgg cctagacgca accccaggag gcgcagtttc cccaggcgat aatagcgctg
      481 gcgcccgcgg cggctttctt cagtttttca ataaacgggc ggccgccgct gatacagaac
      541 attccttgct ctcctaacgg cggattgcct tccaccgcca gaatgtattt cccggcgtag
      601 cgagtggtaa tatcgtcaaa gacttcttcg gcctgtgcgc cggcggcggc catcagggtg
      661 tcgtcataat cgagggaaat cagcgagagg atcacatctt tggctagcgg gtgcgaggaa
      721 cggataaagg attcggtaca gcaggtgcat tccagtccat gaatccagac caccggaatc
      781 cgcggtttat tctccagcgc ccaggcgatc tttggcgtca ttccggcgcc cagtcccagc
      841 gatgtggcgg caaggctaca gaatttgaga aagctgcgtc gggtcactcc cttacgacgc
      901 atggcttgat aaaaggtctc ctcgttattc ataacgcgta ttttttctcc tttttgcacc
      961 acgctccgcc aggggcataa ggcgcttttg cgggtccgtt gacgttccgc cagcaaggta
     1021 aatcattgtg ttacgcgcga gcgcggaaac gagcccgatt cactttgcac cgacgtatac
     1081 cgccagaaat aatgtgaaaa aagcgtatcg gattaacgat aagaaacaat gtgaagtgtg
     1141 tgggtatagc ttatagcggt atatttatac ccattatcgg tttttcggcg aaagggccgt
     1201 ggcggggaag cgcggttgag tttgttccgg gatgaggttt tcagtgagca acctcaagtg
     1261 gatttagcct ggtctcgcca tttcagggat acgtaagttg atgcaaaagg agggaggatt
     1321 tgatgtcatc gttaaaagaa gcatacttcg tgatgatttt tatataaaat gatggtgctg
     1381 gttttaaagg aatgcaaaaa agagactgtt tgaaagaggg cgtcccatga aaaataacat
     1441 cagatttgac ttatccgatt atttgattca tttttttcgg gacgttgatt tagagaccgg
     1501 tagccatatt tatttacctg aacactgtgg ttttaataat cagcaccatg catgttccat
     1561 tgatgctaaa tatttactta gattatcttt acgcagtcat aaaattttct cgtcctggtc
     1621 ataccgaaat ggacaacgaa ccgtatatgg tgactccccg gtggtatgct ttacagatat
     1681 gccgattgca gcttatttag aaactggtgt tcgccgatta gaacgaaatg aaaatattgg
     1741 tttatatgca atcgttttac ctaaagagca aatgtttaat tatggggcaa ggccagtcat
     1801 atatgggttg gatcagcata acaatgctcg atgctcgcaa ggcagatatg gggaacgtat
     1861 tcttgatgaa acggctcttc ctctgattga acaatataga tatgttactt atgttccagg
     1921 taagattgac tggacacatg aacgcgaatg gcgatggcca tatcgtggcg atattaaaaa
     1981 attccttaat catattaaag agtatggtat tccggaaaac attgaaagta ccccagggtt
     2041 tgattttaga tcaagcgaaa taagtggtgc gggaataatc gtcccgtttg cagaagatat
     2101 ccctaccgta gctcacgata ttttaacttt aattgaccgg ggtgtcattg gaagaaatac
     2161 tttcaaattc attatagctg tagagagttt acaatcatgg acccagctct cggaaccggg
     2221 tgcgttacta tcctatatta atgacaatac tttcgaattt gaatcttttt ttgatttatc
     2281 tgcatctaaa gtaaaaaatt atgctgactc tatcaatgat tatgtaagtg aattatattc
     2341 aaaaaaagat tttttaaatg ataattatgc aatggaattt ggaaatgcct gggtctggat
     2401 tcatgataac caatcccagg tggtacgggc gttactgcag gctggaatga tcaaggttaa
     2461 taaagaaggg cggtacttat tagatgttaa tttggcttct gttgattggc cattaagaag
     2521 aaaagaggct ttcgcaagtc atgttgcggg atggctcaaa catcgttttg atatcgaagc
     2581 gggaaggtat tccgttcggg gaaaagatga ttatgatgcg atcccaagtt atgagacgcc
     2641 gctaaaggat cagcatcctt tttataatca tacagtgaat gtcgactggt aattaagaaa
     2701 aaaacttacc ctgttagctc tgcgttaatt gagcctgtca gtatgagttg agatattatg
     2761 aaataaaaaa tccacgcggc tgcgtggatt ttatgagttt ctttgcctct tatgagattc
     2821 agcaaaacct cataagacaa caatttttac ttagacgttg aacaggaagt tcattatatc
     2881 gccatcttta acgatataat ctttgccttc cgctcgcatc ttaccggctt ctttcgcgcc
     2941 ttgttcacct ttataggtaa taaagtcgtc aaaggcgata gtttgagcgc ggataaagcc
     3001 tttttcgaag tcggtatgga ttttacctgc tgcttgcggc gcggttgcgc caaccggaat
     3061 ggtccatgcg cgaacttctt tcaccccggc ggtgaagtag gtctggaggt tcagcaggcg
     3121 ataaccagcg cgaataacgc ggttcagccc cggttcttcc agacccagtt cagccataaa
     3181 ttcgtcacgc tcgtcatcat ccagctcagc aatatcagct tcgacggcgg cacacaccgg
     3241 aaccacgacc gaaccttctt tcgcggcgat ttcgcgaacc tggtccagat acgggttatt
     3301 ttcaaaaccg tcttcattga cgttagcgat atacattgtc ggcttcagcg tcaggaagct
     3361 taaataacgg atagccgctt tatcttcgtc cgtcaggtcc agcgaacgca gcatccccgc
     3421 ttcggccagg tgcggcaggc atttttccag cgcggccagt tccgctttgg cgtctttatc
     3481 gccgcctttg gctttcttct gtacgcgatg gatcgcgcgc tcgcaggtat cgaggtcagc
     3541 cagcgccagc tcggtattga taacatcaat atcttctgcc ggatttactt tacccgccac
     3601 gtggatgata ttgtcgttct caaagcagcg aaccacgtga ccgatagctt cggtttcacg
     3661 gatattggtc aggaactggt tacccaaccc ttcgcctttg gatgcgcctt ttaccagacc
     3721 ggcgatatcc acgaactcca tcgtggttgg tagaatgcgt tgcggtttaa caatctcagc
     3781 caactggtcc agacgcggat cgggcatcgg cacgacaccg gtattcggtt cgatagtgca
     3841 gaacggaaag tttgccgctt caataccggc ttttgtcagc gcgttgaaca gggtggattt
     3901 cccgacgttg ggcagaccga cgataccgca tttgaatccc atgatttaac tcaccttaat
     3961 atcttaataa tcaacctgtt atagaaaaca gattgcagaa atggaaataa cttcgcctat
     4021 tatacacggc gtgcggcaaa aatgccgcac atcactggtt attgcgcctt aaaggtatgc
     4081 aaacggcttg ttgctttggc cagaccctct ttgaaccaca attccgtaca gcgcgccgct
     4141 tcgtcaatgg cctcatcaat taatttttgt tcagaaacag ggggtttacc cagcacgaaa
     4201 ccaacaactt tatttttatc gcctggatga ccaattccaa cgcgtaagcg gtgaaagttg
     4261 ggattattgc ccagcttgct gatgatgtct ttcagaccat tgtggccgcc gtggccgccg
     4321 ccaagtttaa atttcgcgac gcccggcggg agatccagct cgtcgtgagc gaccagaatt
     4381 tcgtccggct gaatacggta aaaactggcc attgcgccaa ctgctttacc actgaggttc
     4441 atgaacgtgg tgggtaccag caggcgaaca tcttcccctt ccagcgtgat gcgtgaggta
     4501 tagccaaaga atttaggctc ttcacgcaac ggcgcgcgca ggcgctccgc cagtaaatcg
     4561 acgtaccatg cgcctgcatt gtgtcgcgtc gcggcatatt ccgcgccggg attcgccaga
     4621 ccaacaatca atttaattgc cacgtttttt gtcctgagta gatccatgac tggcgcgtag
     4681 tttactgtct gtctgcccgc ttgacaaaac acagcgacac tctgaagtaa attaaataat
     4741 tgccagcatt gattattaaa aatgtaaact gttcagagtg ttatttgtaa agttttgtta
     4801 aatgaaactt tacatttgtg atcgcacccg cacttacaaa tggaagtgtt gtctatactt
     4861 tacacataaa gtttaggggg atttcctaaa aacaacccaa aagttccgga ggtgacatat
     4921 gaaacgcaaa aacgcttcgt tattcggtaa cgtgctgatg gggttggggc tggtcgtgat
     4981 ggttgtcggc gtgggttact ctattttaaa ccaactgccg cagtttaatt tgccgcaatt
     5041 ttttgcgcat ggcgcaatac tgagcatttt tgtcggtgca gttctttggc tggcgggggc
     5101 tcgtgtaggg gggcatgagc aggtgagcga caaatattag tgggtacgtc actatgacaa
     5161 acgttgccgc cgtagcgaca atcgtcgtca tagctaaccg gttcaggccc ggtaagcgtt
     5221 atcgccaccg ggcattgtcc attaactgag taaatccgct aacgcctccg tcctgttcgg
     5281 gaagaaggtc agacgtccag gaatgggttt gataccggca cgcgccattg tgcgcagcgg
     5341 ttggaactcc aggttactga tacgcaattc gcaaccctcc ggcagacgct tcacaaaacg
     5401 ctgaaaagca tcaagcccgc ctgcatccag cactggtact gcgtcccatt tcagaacgac
     5461 gatacgtttg cccttaatac gtgactcaag gtcggtaaac agcccttccg ccgcggcgaa
     5521 aaagagcgga ccgataacac gcagcaccag cacatcttca ggcacatcga cattgaccgg
     5581 cgcaagtcga gtcattcgcg caatacggcg cataaacagc agggaagcaa ggacaatccc
     5641 cacgctgatg gcgatgacca tatcaaacag aaccgttaat gacatgcaca gcagcataac
     5701 gataatgtca tctttcggcg catggcgtaa cagatccacc actttatggg cttcactcat
     5761 attccatgcc accatcagca gtagcgccgc catcgcggaa agcggcagcc aggagagtag
     5821 cggggctaag accagtagcg ccagaatgac cagaatagcg tgaattaccg c
//
LOCUS       DAGWFR010000215         5828 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.218, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000215 DAGWFR010000000
VERSION     DAGWFR010000215.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 5828)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5828)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5828
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.218"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..929)
                     /locus_tag="MOX77_004150"
     CDS             complement(<1..929)
                     /locus_tag="MOX77_004150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415724.2"
                     /note="role in sulfate transport across the inner
                     membrane; member of the SulP family of sulfate
                     transporters; seems to mediate transport via
                     sulfate/proton symport; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylic acid transporter DauA"
                     /protein_id="HCA3359546.1"
                     /translation="MNKLFSSHVMPFRALIDACWKEKYTASRFTRDVIAGITVGIIAI
                     PLAMALAIGSGVAPQYGLYTSAVAGIVIALTGGSRFSVSGPTAAFVVILYPVSQQFGL
                     AGLLVATLMSGFFLILFGLARLGRLIEYIPVSVTLGFTSGIGITIGTMQIKDFLGLQM
                     AHVPEHYLQKVGALFMALPTVNIGDAAIGVVTLGTLIFWPRLGIRLPGHLPALLAGCA
                     VMGIVNLLGGNVATIGSQFHYVLADGTQGNGIPQLLPQLMLPWSLPGSDFTLSWDSLR
                     ALLPAAFSMAMLGAIESLLCAVVLDGMTGTKHKA"
     gene            complement(1054..2001)
                     /gene="prs"
                     /locus_tag="MOX77_004151"
     CDS             complement(1054..2001)
                     /gene="prs"
                     /locus_tag="MOX77_004151"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002910407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate diphosphokinase"
                     /protein_id="HCA3359547.1"
                     /translation="MPDMKLFAGNATPELAQRIANRLYTSLGDAAVGRFSDGEVSVQI
                     NENVRGGDIFIIQSTCAPTNDNLMELVVMVDALRRASAGRITAVIPYFGYARQDRRVR
                     SARVPITAKVVADFLSSVGVDRVLTVDLHAEQIQGFFDVPVDNVFGSPILLEDMLQLN
                     LDNPIVVSPDIGGVVRARAIAKLLNDTDMAIIDKRRPRANVSQVMHIIGDVAGRDCVL
                     VDDMIDTGGTLCKAAEALKERGAKRVFAYATHPIFSGNAANNLRNSVIDEVVVCDTIP
                     LTDEIKALPNVRTLTLSGMLAEAIRRISNEESISAMFEH"
     gene            complement(2267..3118)
                     /gene="ispE"
                     /locus_tag="MOX77_004152"
     CDS             complement(2267..3118)
                     /gene="ispE"
                     /locus_tag="MOX77_004152"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HCA3359548.1"
                     /translation="MMTHWPSPAKLNLFLYITGQRADGYHTLQTLFQFLDYGDTLHIE
                     PRHDGEIHLLTPVTGVENEDNLIVRAARLLMKVASESGRLPAGSGADISIEKRLPMGG
                     GLGGGSSNAATVLVALNHLWQCGLSIDELATLGLTLGADVPVFVRGHAAFAEGVGEIL
                     TPVNPPEKWYLVAHPGVSIPTPVIFKDPQLPRNTPKRSIDTLLKCEFSNDCEVIARKR
                     FREVDAALSWLLEYAPSRLTGTGACVFAEFDTESCARQVLEQAPEWLNAFVAKGVNLS
                     PLHRELL"
     gene            complement(3115..3738)
                     /gene="lolB"
                     /locus_tag="MOX77_004153"
     CDS             complement(3115..3738)
                     /gene="lolB"
                     /locus_tag="MOX77_004153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein localization protein LolB"
                     /protein_id="HCA3359549.1"
                     /translation="MTLPDFRLIRLLPLASLVLTACTLPGHKGPGKSPDSPQWRQHQQ
                     EVRHLNQYQTRGAFAYISDDQKVYARFFWQQTGQDRYRLLLTNPLGSTELELNAQPGN
                     VQLVDNKGQRYTADDAEEMIGKLTGMPIPLNSLRQWILGLPGDATDYKLDDQYRLSEV
                     NYHQDGKNWKVVYGGYDSKTQPAMPANMELSDGSQRIKLKMDNWIVK"
     gene            4052..5308
                     /gene="hemA"
                     /locus_tag="MOX77_004154"
     CDS             4052..5308
                     /gene="hemA"
                     /locus_tag="MOX77_004154"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_041689438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HCA3359550.1"
                     /translation="MTLLALGINHKTAPVSLRERVTFSPDTLDQALDSLLAQPMVQGG
                     VVLSTCNRTELYLSVEEQDNLQEALIRWLCDYHNLNEDDLRNSLYWHQDNDAVSHLMR
                     VASGLDSLVLGEPQILGQVKKAFADSQKGHLNASALERMFQKSFSVAKRVRTETDIGA
                     SAVSVAFAACTLARQIFESLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRER
                     AQALADEVGAEVISLSDIDARLQDADIIISSTASPLPIIGKGMVERALKSRRNQPMLL
                     VDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRQAAAVEAETIVEQEASEFMA
                     WLRAQGASETIREYRSQSEQIRDELTTKALSALQQGGDAQAILQDLAWKLTNRLIHAP
                     TKSLQQAARDGDDERLNILRDSLGLE"
     gene            5349..>5828
                     /locus_tag="MOX77_004155"
     CDS             5349..>5828
                     /locus_tag="MOX77_004155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012132158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PCRF domain-containing protein"
                     /protein_id="HCA3359551.1"
                     /translation="MKPSIVAKLEALHERHEEVQALLGDAGIIADQDRFRALSREYAQ
                     LSDVSRCFTDWQQVQDDIETAQMMLDDPEMREMAQEELREAKEKSEQLEQQLQVLLLP
                     KDPDDERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYK
                     "
BASE COUNT         1406 a         1578 c         1629 g         1215 t
ORIGIN      
        1 gctttatgtt tggtgccggt catgccgtcc agcacgacgg cgcagagcaa tgattcgatt
       61 gcccccagca ttgccatcga gaaagccgct ggcagcagcg cgcgcagtga atcccagctt
      121 agcgtaaaat cggagccagg aaggctccac ggcagcatca gttgcggcag gagctgcggg
      181 atgccgttgc cctgagtgcc gtcagccaga acgtaatgga actgtgagcc gatagtcgcc
      241 acattgccgc ccagcagatt aacaatcccc attacggcgc aaccggccag cagcgcggga
      301 aggtgtcccg gcagacgaat accgagacgc ggccagaaaa tcagcgttcc cagcgttacc
      361 acgccaatgg cggcatcgcc aatattgacg gtgggcaacg ccataaacag cgcgccgact
      421 ttctgcaaat agtgctctgg cacatgggcc atctgcagac caagaaaatc tttaatctgc
      481 atggtaccga tggtaatacc aatccctgag gtaaaaccca acgtgaccga caccgggata
      541 tattcaatca atcgccccag tctcgccagg ccgaaaagga tcaggaagaa gcccgacatc
      601 agcgtggcga ccagtaggcc cgccagacca aactgttgcg acaccggata caaaatcacc
      661 acaaacgcgg cggtagggcc ggaaacgcta aagcgcgagc cgccggttag cgcgatcacg
      721 atcccggcga cagcggaggt atagaggcca tactgcggcg caacgccact gccaattgcc
      781 agcgccatcg ccagcgggat agcaataatc ccgacggtga tcccggctat cacatcacgg
      841 gtgaaccggg aggcggtata tttttctttc cagcaagcat cgatgagagc gcggaaaggc
      901 atcacatgtg aggaaaataa tttgttcaca ataatgtttc atccatgagc gcatcatctg
      961 tcaactaaat ggcaggtgaa ggaggcataa gtcatataaa agggtgttac agacaaaaaa
     1021 acccgccgca gcgggtttca gatccgggtt cgatcaatgc tcgaacatgg cggaaatcga
     1081 ttcttcgttg ctgatacggc gaatcgcttc ggccagcata cctgacaggg tcaaagtacg
     1141 cacgttcggc agcgctttga tttcgtcggt cagcggaatg gtgtcacaga caacgacttc
     1201 gtcaataacg gagttgcgca ggttgtttgc cgcattgcct gagaagatcg ggtgcgtcgc
     1261 gtaggcaaac acgcgtttag cgccacgttc tttcaatgct tctgctgctt tgcacagagt
     1321 accgccggta tcgatcatat catcaaccag cacgcagtca cggccagcga cgtcgccgat
     1381 gatgtgcatc acctgagaaa cgttcgcgcg cggacgacgt ttatcaatga tagccatatc
     1441 ggtatcgttc agcagcttag cgatagcgcg ggcacgaacc acgccgccaa tatccgggga
     1501 aaccacgatt gggttatcca gattcagttg cagcatatct tcgagcagga ttgggctacc
     1561 gaacacgtta tcaaccggaa cgtcaaagaa gccctggatc tgttcagcat gcagatctac
     1621 ggtgagaacg cggtcaacgc cgacgctgga caggaagtca gcgacaactt ttgcggtaat
     1681 cggcacacgg gcggaacgta cgcgacggtc ctgacgtgca tagccaaagt aggggataac
     1741 ggcggtgata cgacctgcgg aagcacgacg cagggcatca accataacga ccaattccat
     1801 caggttgtcg ttggttgggg cacaagtgga ctggatgatg aaaatatcac caccgcgtac
     1861 attttcgttg atttgtacgc tgacttcgcc gtcgctaaag cgacctacgg cggcgtcgcc
     1921 gagagaagtg tacaggcggt tggcaatacg ttgtgctagt tccggggtgg cgttaccagc
     1981 aaaaagcttc atatcaggca cgagaagaac ctcaggcatg cgtccattgg tggaaagaat
     2041 ctgccgaaaa ctgtgcgggc caggcaaaat cctatccagg cggtgtatta aagagcgcga
     2101 tgcaacgtct ggaacaaggt gacgttgtca ccgaagctca gcttgcccgg cttactcgtc
     2161 ttcattcacg tttcatgtgc gctggtatca atgcctcaca ccggtcaaat acggcatata
     2221 tgaccggcga ctcgtcattt cgccatcttc ctgaaacccg aatgcgttag agtaactctc
     2281 gatgcaatgg ggaaaggtta acacccttcg ccacaaaagc attgagccat tccggggctt
     2341 gctcaagcac ctggcgagca caagactctg tatcgaattc agcaaagaca caggcccctg
     2401 tcccagtcag gcgcgacggc gcgtattcta acagccagga aagcgccgca tcaacctcgc
     2461 gaaaacgttt tcttgcgata acctcgcaat cattgctgaa ttcacatttt agtaacgtat
     2521 ctattgacct ttttggcgta ttacgcggca attgaggatc tttaaagata actggcgtcg
     2581 gaatgcttac gccagggtgc gcgaccagat accatttttc cggcggattc accggcgtta
     2641 atatttcgcc tacgccttcg gcaaacgcgg cgtggccacg aacaaagacc gggacgtcgg
     2701 cgccgagcgt caggccgagc gtcgccagtt catcaatgga aagcccgcat tgccaaagat
     2761 gattgagcgc caccagaacg gtcgcggcgt tagacgagcc gccacccaga ccgccgccca
     2821 tgggaaggcg cttctcaatg ctgatatccg cgccgcttcc ggcgggcagg cgtccactct
     2881 ccgaggcgac tttcatcaac agccgcgcgg cgcggacgat cagattgtct tcattttcaa
     2941 cgccggttac cggcgttaat aaatggattt cgccatcgtg acgcggttcg atgtggagtg
     3001 tgtcgccata atccagaaac tgaaacagcg tctgcagcgt gtggtagccg tctgcacgct
     3061 gtccggtgat atataaaaac agatttaatt ttgccggaga aggccaatgg gtcatcattt
     3121 cacaatccag ttatccattt tcagcttaat gcgctgactg ccatctgaaa gctccatatt
     3181 ggctggcatg gcaggctgcg ttttgctgtc atagccaccg taaaccactt tccagttttt
     3241 accatcctgg tggtagttca cttcgctcag gcggtactgg tcgtccagtt tgtagtcggt
     3301 ggcatcgcca ggcagaccga ggatccactg ccgcaggctg tttaacggaa tcggcatccc
     3361 ggtgagtttg ccgatcatct cttcggcgtc atcggcggta taacgctggc ctttgttatc
     3421 caccaactgg acgttgcccg gctgggcgtt aagctccagc tcggtgctgc ccagcgggtt
     3481 ggtaagcagc aggcggtagc gatcctgtcc ggtctgttgc cagaagaagc gcgcatagac
     3541 tttctgatca tctgagatgt aagcaaaggc gccgcgcgtc tggtattgat tcagatgacg
     3601 cacctcttgc tgatgctggc gccactgagg ggaatccggg ctcttgcccg ggcctttatg
     3661 cccaggaagc gtacaggcgg tgagaaccag gcttgctaac ggcagtagac gaatcaggcg
     3721 aaaatcgggc agggtcatag tgatgacgaa tccttgtgat acggtgcaat aattgcctga
     3781 aggcgttacg cttatcaggc ctgaaaactg aaccggcaag ctgtaaaaac gttcgcgccg
     3841 cgattcggca aatttttgct atcggttaca gttatagcct ttaatgctag cgccgcctgg
     3901 tgacatcgtc tactttcaag ttgtcttaaa tcatcaaatt agcgagcgct gccaattact
     3961 ccaaaagggg gctctctctt ttattgacca cgcgcatcct gtatgatgca agcagactaa
     4021 ccatatcaac gctggtacta ctcccgcaga catgaccctt ttagcactcg gtattaacca
     4081 taaaacggca cctgtatcgc tgcgagaacg cgtaacgttt tcgccggaca cgcttgatca
     4141 ggcgctggac agcctgcttg cgcagccaat ggtgcagggc ggggtcgtgc tgtcaacctg
     4201 taaccgtaca gagctgtatt tgagcgtgga agagcaggat aacctgcaag aagcgctgat
     4261 ccgctggtta tgcgattacc ataacctgaa cgaggacgat ctgcgcaaca gtctgtactg
     4321 gcatcaggac aatgacgccg tcagccacct gatgcgcgtc gccagcggtc tggattcact
     4381 ggtgctgggc gaaccgcaaa tcctcggtca ggtgaaaaaa gcgtttgcgg attcgcaaaa
     4441 aggccacctt aacgccagcg cgctggagcg aatgtttcag aagtcttttt ccgtcgccaa
     4501 gcgagtgcgg actgaaaccg atatcggcgc cagcgccgtc tccgtcgcgt ttgccgcctg
     4561 tacgctcgcc cgccaaatct ttgaatcgct ctcgacggtc actgtactgt tagttggcgc
     4621 gggcgaaact attgaactgg tggcgcgtca cctgcgcgag cataaagtac aaaagatgat
     4681 tatcgccaac cgaacccgcg agcgcgcgca agccctggcg gatgaggttg gcgctgaggt
     4741 tatctcgctc agcgatatcg acgcccgctt gcaggatgcc gatattatca tcagttcgac
     4801 cgccagcccg ctgccgatta tcggtaaagg catggtggag cgcgcattaa aaagccgtcg
     4861 caaccagccg atgctgctgg tggatatcgc cgtaccgcgc gacgttgagc cggaagtcgg
     4921 caaactggcg aacgcttatc tttatagcgt cgatgattta cagagcatca tttcgcataa
     4981 tctggcgcag cgtcaggctg cggcggtgga agcggaaacg attgttgagc aggaagccag
     5041 cgagtttatg gcctggctac gcgcccaggg ggccagcgag accattcggg aataccgtag
     5101 tcagtcggag cagattcgtg acgaactgac taccaaagcg ctgtcggccc ttcaacaggg
     5161 cggtgatgcg caagccatct tgcaggatct ggcatggaaa ctgaccaacc gcctgattca
     5221 tgcgccaacg aaatcacttc aacaggctgc ccgtgacggg gatgacgaac gcctgaatat
     5281 tctgcgcgac agcctcgggc tggagtagca gcacacacca cactttttta cagggtgaat
     5341 ttacgcctat gaagccttct atcgttgcca aactggaagc cctgcacgaa cgccatgagg
     5401 aagttcaggc gttgctgggc gatgcgggaa ttatcgccga ccaggaccgc tttcgcgcat
     5461 tgtcgcgcga atatgcgcaa ttaagcgacg tttctcgctg ttttacggac tggcaacagg
     5521 ttcaggacga tatcgagacg gctcagatga tgctcgacga tcctgaaatg cgggaaatgg
     5581 cgcaggaaga actgcgcgaa gcgaaagaaa aaagcgaaca actggagcaa cagttacagg
     5641 tactgctgct gccgaaagat ccggacgatg aacgaaacgc gttccttgag gttcgcgccg
     5701 gcactggcgg cgacgaagcc gcgctgtttg ccggcgatct gttccgcatg tacagccgtt
     5761 atgccgaagc gcgccgctgg cgcgtggaga tcatgagcat gagcgaaggc gagcatggcg
     5821 gttataaa
//
LOCUS       DAGWFR010000216         5789 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.219, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000216 DAGWFR010000000
VERSION     DAGWFR010000216.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 5789)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5789)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5789
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.219"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(8..862)
                     /gene="pbpG"
                     /locus_tag="MOX77_004156"
     CDS             complement(8..862)
                     /gene="pbpG"
                     /locus_tag="MOX77_004156"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416638.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine endopeptidase"
                     /protein_id="HCA3359552.1"
                     /translation="MLAVPFAPQAVAKTAATTAASQPEIASGSAMIVDLNTNKVIYSN
                     HPDLVRPIASITKLMTAMVVLDARLPLDEILKVDISQTPEMKGVYSRVRLNSEISRKN
                     MLLLALMSSENRAAASLAHYYPGGYNAFIKAMNAKAKALGMTHTRFVEPTGLSIHNVS
                     TARDLTKLLIATKQYPLIGQLSTTREDMATFSHPAYTLPFRNTNHLVYRDNWNIQLTK
                     TGFTNAAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTWIETGKVMPVPAAA
                     ICAAFCFL"
     gene            complement(1067..1654)
                     /locus_tag="MOX77_004157"
     CDS             complement(1067..1654)
                     /locus_tag="MOX77_004157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014170891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YIP1 family protein"
                     /protein_id="HCA3359553.1"
                     /translation="MNHVWGLFSHPDREMQVIKSENETVSHHYTHHVLLMAAIPVVCA
                     FIGTTQIGWNFGDGNVLQLSLFTAFALAVLFYGVMLAGVAVMGRVIWWMARNYPQRPS
                     LARCMVFAGYVATPLFLSGLVALYPLVWLCALVGAVALFYTGYLLYLGIPTFLNINRE
                     EGLSFSSSTLAIGVLVLEVLLAITVILWGYGYRLF"
     gene            1813..2382
                     /locus_tag="MOX77_004158"
     CDS             1813..2382
                     /locus_tag="MOX77_004158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001669449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HCA3359554.1"
                     /translation="MDINTLITHYGYAALVIGSMAEGETVTLLGGVAAHQGLLKFPLV
                     AAAVALGGMMGDQLLYLLGRCYGGKILRRFPRYHTKIRRAQKMIQRHPYLFVIGTRFM
                     YGFRVVGPLLIGASRLPPKIFLPLNIVGALIWALLFTTLGYLGGEVIAPWLHDLDQHL
                     RHGVWLILAIVLVVGVRWWLKRRGKAEAR"
     gene            complement(2430..3191)
                     /locus_tag="MOX77_004159"
     CDS             complement(2430..3191)
                     /locus_tag="MOX77_004159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HCA3359555.1"
                     /translation="MTKVAIVTASDSGIGKACALLLAQNGFDIGITWHSDERGAQETA
                     KKAAQFGVRAETIHLDLSQLPEGAQAIEHLIQRLGRVDVLVNNAGAMTKSAFIDMPFT
                     QWRQIFTVDVDGAFLCAQIAARHMIKQGEGGRIINITSVHEHTPLPQASAYTAAKHAL
                     GGLTKSMALELIEHHILVNAVAPGAIATPMNDMDDSDIEPGSEPSIPIARPGSTHEIA
                     SLVAWLCSEGASYTTGQSLIVDGGFMLVNPQFNAK"
     gene            complement(3257..4693)
                     /gene="mdtQ"
                     /locus_tag="MOX77_004160"
     CDS             complement(3257..4693)
                     /gene="mdtQ"
                     /locus_tag="MOX77_004160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug resistance outer membrane protein
                     MdtQ"
                     /protein_id="HCA3359556.1"
                     /translation="MNRNSFLAATASLPLFILLAGCAPMHDTRQSLTQQTPSSHVDSS
                     LPAALKNGWPDSQWWKAYHDAQLDALIDNAIQHSPDMQVAEQRIQLAEAQAKAVEAQD
                     GPQLDFSADIERQRMSAEGLMGPFAITDPAAGTTGPWYTNGTFGLTAGWDLDLWGKNR
                     AEVTARIGAVKAREAEQEQTRQLLASGVARLYWEWQTQAALKNVLMQIEHEQQNVVAV
                     NRELYQHGITSSVEGVETDIDASKTQQQLNDVNGKMKVIEARLSALTNTQSAALKLRQ
                     VSLPAVESQLPSQLGYSLLARRADLQAAHWYIESSLSSIDAAKAAFYPDINLMAFLQQ
                     DALHLSDLFRHSAQQYGITGGLTLPIFDSGRLNANLDIAKAQSNLSIANYNKAVVDAV
                     NDVARAASQVETLAQKNQHQQQIEHDAQRVVGLAQARFNAGIIAGSRVSEAKIPALRE
                     QCNGLLLQGQWLDASIQLTSALGGGYHS"
     gene            5011..5094
                     /gene="yohP"
                     /locus_tag="MOX77_004161"
     CDS             5011..5094
                     /gene="yohP"
                     /locus_tag="MOX77_004161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020233574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YohP"
                     /protein_id="HCA3359557.1"
                     /translation="MKILLWAILIIFLIGLLVVTGVFKMIF"
     gene            complement(5152..>5789)
                     /gene="dusC"
                     /locus_tag="MOX77_004162"
     CDS             complement(5152..>5789)
                     /gene="dusC"
                     /locus_tag="MOX77_004162"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tRNA dihydrouridine(16) synthase DusC"
                     /protein_id="HCA3359558.1"
                     /translation="VVNGSGGGATLLTDPELIYQGAKAMRAAVPSHLPVTVKVRLGWD
                     SGDRKFEIADAVQQAGASELVVHGRTKAQGYRAEHIDWQAIGEIRQRLTIPVIANGEI
                     WDWQSAQACMATSGCDAVMIGRGALNIPNLSRVVKYNEPRMPWPEVVTLLQKYTRLEK
                     QGDTGLYHVARIKQWLGYLRKEYIEATELFQSIRALNRSSEIARVIQAIKI"
BASE COUNT         1299 a         1637 c         1509 g         1344 t
ORIGIN      
        1 cgctgagcta taaaaagcaa aaagccgcgc aaatggcggc agccggaacg ggcatgactt
       61 taccggtttc aatccatgta cgcaggcgac tggcgtccgc aaagtgggta tatttgccga
      121 acgcgtccat gaccaccagc gcgaccggtt tgttattgat cacggtacgc atcaccaggc
      181 aatgccccgc cgcattggta aagccggttt tcgttaactg gatattccag ttatcacggt
      241 agaccaaatg gttggtattg cgaaacggca gcgtatacgc cggatgcgag aatgtcgcca
      301 tatcttcgcg cgtggtgctt agctggccaa tcagcgggta ttgcttcgtg gcaatcagca
      361 attttgttaa atcccgcgcg gtcgagacgt tatgaatcga cagccccgtc ggctcaacaa
      421 agcgggtatg cgtcatgccc agcgctttcg ccttcgcatt catcgcttta ataaatgcgt
      481 tataaccgcc gggataatag tgcgccaggc ttgccgccgc acggttttcg gatgacatca
      541 acgccagcag caacatattt ttgcggctaa tttcgctgtt caggcgcacg cgggagtaaa
      601 cccctttcat ttccggcgtc tggctgatat cgaccttcag tatttcatcc agcggcaatc
      661 gcgcgtcgag cacgaccatc gctgtcatta atttggttat cgaggcaatc ggacgcacca
      721 gatccgggtg gttcgaatag atcactttat tggtgttgag atcaacaatc attgcgctac
      781 cggaggcaat ctcaggttga gacgccgcgg ttgtcgctgc cgttttcgcc acagcctgcg
      841 gggcaaaagg aacggccaac atcagagcaa ggctcaggaa tgaagctcag aatttcagca
      901 tgatgagatt tctgataatg attcacgcgc gtcgtaacgc acaccgcctg agctaagatt
      961 atactcaagc tagcagtggc atcatagcgg cacgccagcg ttgccgctac agaagaatcg
     1021 tcagcaaatg ctgcattgct ggcttttgcg ccagcccttt ttcgcatcag aacaggcggt
     1081 agccatatcc ccacaggatc acggtgatcg ccagcagcac ctccaggacc agtacgccga
     1141 tagcgagcgt cgaactggag aagcttaatc cctcctctct attaatgtta aggaaagtcg
     1201 gaatacccaa atacagcaaa tagccggtgt aaaaaagcgc gacagcgccg accaaagcgc
     1261 atagccatac caggggatag agcgccacca gaccacttaa aaacagcggc gtcgcgacat
     1321 agccggcaaa aaccatacag cgcgcaagcg atggccgttg cggatagttt cgcgccatcc
     1381 accagatgac gcgtcccatc accgcgacgc ccgccagcat cacgccgtag aacaagaccg
     1441 ccagcgcaaa agcggtaaac agcgagagtt gtaacacgtt gccgtcgcca aaattccagc
     1501 cgatttgcgt cgtgccgata aaggcgcaga cgacgggaat cgccgccatc agcaaaacat
     1561 ggtgcgtata gtgatgcgaa acggtttcgt tttcgctttt gatcacctgc atttcccgat
     1621 cgggatggga aaaaagcccc catacatggt tcatactgcc cccttctgct gcctcagatg
     1681 ccagtatgtt caagtataat tcagtttctg gttattttat gagcaatggc aaaatagtct
     1741 ccggcaaaac gtcggctttg ccgcgcacgc ctcttgccag ggtgtatgct taatgccgga
     1801 ggtggtttac gcatggatat caacacgctt attacgcatt atggctatgc ggcgctggtt
     1861 atcggcagta tggccgaagg tgaaaccgtt accctgttgg ggggcgtcgc ggcgcatcag
     1921 ggattactca agtttccgct ggtggcggcg gccgtcgcgc tgggagggat gatgggcgat
     1981 cagctacttt acctgttagg acgatgctat ggcgggaaga tcctgcgtcg tttcccgcgt
     2041 tatcatacga agattcgtcg cgcgcagaaa atgatccaac gccatccgta tctgtttgtg
     2101 atcggcacgc gttttatgta tggcttccgg gtggttggcc cgctgctgat tggcgccagc
     2161 cgcctgccgc ctaaaatttt tctgccgctg aatattgtag gcgcgctgat ctgggcgctg
     2221 ctgtttacca cgctgggata tcttggcggc gaggtgatcg cgccatggct gcacgacctc
     2281 gatcagcatc tcaggcacgg agtctggctg attctggcca tcgtcctggt ggtgggcgtg
     2341 cgctggtggc tgaaaagacg cggcaaagcg gaggcccgtt aaacccgatg gtatccggat
     2401 ggcataacgc cgccatccgg ccccggcgtt tattttgcgt tgaattgcgg attcaccagc
     2461 ataaatccgc cgtcgacaat cagcgactga ccggtggtat agcttgcgcc ttccgaacac
     2521 agccaggcga cgaggctggc tatttcatgc gtagaacccg gtcgggcgat agggatcgag
     2581 ggttccgatc ccggctcaat gtcgctgtca tccatatcat tcatcggcgt ggcgatagcg
     2641 cctggcgcga cggcgttgac caaaatatga tgctcaatca gttccagcgc catggattta
     2701 gtcaatcccc ccaacgcatg tttcgccgcg gtataggcgc tggcttgcgg aagcggcgta
     2761 tgctcatgga cggaggtgat gttgataatg cgccctccct ctccttgttt aatcatatgc
     2821 cgggcggcga tctgcgcgca gagaaacgcg ccatcgacat ccacggtaaa aatttgccgc
     2881 cactgcgtaa acggcatatc aataaacgcg gatttggtca tcgccccggc attattgacc
     2941 agcacgtcaa cgcgccccag gcgctggata agatgttcaa tggcctgcgc gccctcgggt
     3001 aactggctca ggtcaagatg aatggtctct gcccgcacac caaactgcgc cgcttttttc
     3061 gccgtctcct gcgcgccgcg ttcatcggaa tgccaggtga taccaatatc aaaaccgttt
     3121 tgtgctaata acaacgcaca cgctttgcca attcccgaat ctgatgccgt tacaattgcg
     3181 actttggtca tattcctctc cggatgaatc atacacagcc taagtatagg aaccctgtct
     3241 gaatcatctg gaaaaatcag gaatgataac cgccgcccag cgcgctggta agctgaatag
     3301 aggcatccag ccactggccc tgcaacagca agccgttaca ctgctcgcgc agtgccggga
     3361 ttttggcctc gctcacgcgg gaacccgcaa taatgccggc attaaagcgc gcttgcgcca
     3421 gaccgaccac acgctgcgcg tcatgctcaa tctgctgctg atgctgattt ttctgcgcca
     3481 gcgtctctac ctgactggcg gcgcgcgcca catcattaac cgcatctacc accgctttgt
     3541 tgtagttggc gatagaaagg ttgctttgcg ctttggcgat atcgaggttg gcattcagcc
     3601 tgccgctgtc gaaaatcggc agcgtcagcc cgccggtaat gccatattgc tgtgcggaat
     3661 ggcggaacag atcgctcaga tgtaacgcat cctgctgtaa aaaagccatc agattgatat
     3721 cgggataaaa cgcggccttc gcggcgtcaa tgctgctcaa cgaggattca atgtaccagt
     3781 gcgcggcctg tagatccgcc cggcgcgcca gcaacgaata ccccagttgc gacggtaact
     3841 ggctttcaac ggcggggaga ctcacctgac gcagcttgag cgccgccgat tgcgtattgg
     3901 ttaacgcgct gagccgcgct tcaataacct tcattttacc gttaacgtca ttcaactgct
     3961 gctgggtttt gctggcgtcg atatcggtct cgaccccttc aacagaagaa gtaataccgt
     4021 gttgatacag ctcccggttt accgccacca cgttttgctg ctcatgctcg atttgcatca
     4081 gcacattttt cagcgccgcc tgcgtctgcc actcccagta gagtcgcgcc acgccgcttg
     4141 ccagcaattg tcgggtctgc tcctgctccg cttcgcgcgc tttgaccgcc ccgatccgcg
     4201 cggtaacttc agcgcggttt ttcccccata aatccagatc ccagcccgcc gtcaggccga
     4261 atgtaccgtt ggtataccac ggcccggtcg ttcccgccgc ggggtcggta atcgcgaatg
     4321 gccccatcag cccttccgcg gacattcgct ggcgctcaat gtcggcagaa aagtcgagct
     4381 gcgggccgtc ctgcgcctca accgctttcg cctgcgcttc cgccagttga atacgctgtt
     4441 cagccacctg catatccggc gaatgctgta tggcattatc aatcagcgcg tcaagctgcg
     4501 catcgtgata cgccttccac cactggctat ccggccaacc gtttttcaat gccgccggca
     4561 ggctggaatc aacatgagaa gagggcgtct gctgggtcag cgactggcgg gtatcgtgca
     4621 taggggcgca gcccgccagc aaaataaaaa gcggtaagct cgctgtcgcg gcaaggaaag
     4681 aattacgatt catggaggtg ttctgataaa aaaaggtgcg cagagagtac gtcttacggc
     4741 gaactatttt ttagttacgc gtggcaatac atcatcagac aacaaaagac atattttgaa
     4801 atttatatga ttagcaaata atttcatctg atacattttt tgatgtaata cttcaatgaa
     4861 aagtcccact aacccgttca taaatgaacg attttgctgc aatacgcgcc agcagccttc
     4921 atgagttaaa cgtcgccgcg cccaacaaag cagcagatgg cttaatactt tcctatactt
     4981 tgtttgtatt taccaataaa gggacaaaca atgaaaattc ttctatgggc aatcttaatt
     5041 atttttctga ttgggctgtt ggtggtaacg ggcgtgttta agatgatttt ctgattcctg
     5101 cgccgggcag cgatagtatc tgcccggcac acgttctgga cgctgtagag attagatttt
     5161 aatagcctga atcacccgcg caatctcgga cgaacggttt aacgcccgaa tcgactgaaa
     5221 gagttctgtc gcctcaatat attccttacg taaatatccc aaccactgtt taatacgcgc
     5281 gacatggtat aaaccggtat cgccctgctt ttccagtcgg gtatattttt gtaataacgt
     5341 taccacttcc ggccacggca tacgcggttc gttatacttc accacccggc tcaggttagg
     5401 aatatttaac gccccgcggc caatcatcac cgcatcgcag ccgctggtcg ccatacatgc
     5461 ctgcgcgctc tgccagtccc agatttcgcc attagcgata accggaatag tcagacgctg
     5521 gcgtatttcg ccgatcgcct gccagtcgat atgctcggcg cggtagccct gcgctttggt
     5581 acggccatgc accaccagtt cactggcgcc ggcctgctgc accgcatcgg cgatttcaaa
     5641 ttttctatcg ccgctatccc agccgagacg cacttttacc gtcaccggca gatgcgacgg
     5701 taccgcggcc cgcatcgctt tcgcgccctg atagatgagt tcgggatctg tgagcaatgt
     5761 cgcgccgccg ccgctgccgt tcaccactt
//
LOCUS       DAGWFR010000217         5787 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.220, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000217 DAGWFR010000000
VERSION     DAGWFR010000217.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 5787)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5787)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5787
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.220"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..624
                     /locus_tag="MOX77_004163"
     CDS             <1..624
                     /locus_tag="MOX77_004163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000706371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HCA3359559.1"
                     /translation="SIDLSGCHPLLRKVSITVACDVNNPLCGPQGASAIFGPQKGATA
                     EMVNSLDAALENWGRHIYQATGREVINAPGAGAAGGMGAALLGLLNAELRAGVEIVVE
                     TLQLEQAVKDADLVITGEGRLDSQSICGKTPIGVARVAKRHHKPVIALAGGLQHDHHV
                     VYQQGIDAALSILSHIVTLPEALHEAEYNLSLSARNVAAIWRLARQA"
     gene            complement(671..1141)
                     /gene="bcp"
                     /locus_tag="MOX77_004164"
     CDS             complement(671..1141)
                     /gene="bcp"
                     /locus_tag="MOX77_004164"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-dependent thiol peroxidase"
                     /protein_id="HCA3359560.1"
                     /translation="MNPLKAGDIAPKFSLPDQDGEQVNLTDFQGQRVLVYFYPKAMTP
                     GCTVQACGLRDNMDELKKAGVDVLGISTDKPEKLSRFAEKELLNFTLLSDENHQVCEQ
                     FGVWGEKSFMGKTYDGIHRISFLIDADGKIEHVFNDFKTSNHHDVVLNWLKENA"
     gene            complement(1141..1713)
                     /locus_tag="MOX77_004165"
     CDS             complement(1141..1713)
                     /locus_tag="MOX77_004165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system transcriptional
                     repressor"
                     /protein_id="HCA3359561.1"
                     /translation="MTPSSQHYLVITALGADRPGIVNTITRHVSSCGCNIEDSRLAML
                     GDEFTFIMLLSGTWNAITLIESTLPLKGAELDLLIVMKRTSDRPRPAMPATVWVQVEV
                     ADSPHLIERFTALFNSHEMNIAELVSRTQPAEDDKAAQLFIQITAHSPASQNSANIEQ
                     AFKALCTELNAQGSINVVNYSQHDEQDGVK"
     gene            1859..2737
                     /gene="dapA"
                     /locus_tag="MOX77_004166"
     CDS             1859..2737
                     /gene="dapA"
                     /locus_tag="MOX77_004166"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001311023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HCA3359562.1"
                     /translation="MFTGSIVALVTPMDEKGNVSRSCLKKLIDYHVANGTSAIVSVGT
                     TGESATLSHDEHGDVVMMTLELADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLT
                     VTPYYNRPTQEGLFQHFKAIAEHTDLPQILYNVPSRTGCDMLPETVGRLAEIKNIIAI
                     KEATGNLTRVHQIKELVSDDFILLSGDDASALDFMQLGGHGVISVTANVAARDMADMC
                     KLAAEGQFAEARAINQRLMPLHNKLFVEPNPIPVKWACKALGLVATDTLRLPMTPITD
                     HGRDIVKAALQHAGLL"
     gene            2754..3788
                     /gene="bamC"
                     /locus_tag="MOX77_004167"
     CDS             2754..3788
                     /gene="bamC"
                     /locus_tag="MOX77_004167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamC"
                     /protein_id="HCA3359563.1"
                     /translation="MAYSVQKSRLAKVAGVSLVLLLAACSSDSRYKRQVSGDESYLDA
                     APLAELHAPAGMILPITTGDYVIPVTKGSGAVGKALDIRPPAQPLALVSGARTQFSGD
                     TATLLVENGRSSTLWPQVVSVIQAKNYPIEKRDDASQTLTTDWVSWNRLDEDEQYRGR
                     YQISVKPQGYQQAVTVKLVNLEQAGKPVADAASLQRYSTEMMNVISAGLDKTATDAAN
                     AAQNRSAATMDVQSAADDTGLPMLVVRGPFNLVWQRLPAALEKVGMKVTDSTRSQGSM
                     AVTYKPLSDSDWRDLGASDPGLASGDYKLQVGDLDNRSSLQFIDPKGHTLTQSQNDAL
                     VAVFQAAFNK"
     gene            3963..4676
                     /gene="purC"
                     /locus_tag="MOX77_004168"
     CDS             3963..4676
                     /gene="purC"
                     /locus_tag="MOX77_004168"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017458944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HCA3359564.1"
                     /translation="MQKQAELYRGKAKTVYSTENPDLLVLEFRNDTSAGDGARIEQFD
                     RKGMVNNKFNHFIMTKLAEAGIPTQMERLLSDTECLVKKLEMVPVECVVRNRAAGSLV
                     KRLGVEEGMELNPPIFDLFLKNDALHDPMVNSSYCETFGWVSQENLARMKELTYKAND
                     VLKKLFDDAGLILVDFKLEFGLYKGEVVLGDEFSPDGSRLWDKETLDKMDKDRFRQSL
                     GGLIEAYEAVAHRLGVKLD"
     gene            4808..5671
                     /locus_tag="MOX77_004169"
     CDS             4808..5671
                     /locus_tag="MOX77_004169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="neutral zinc metallopeptidase"
                     /protein_id="HCA3359565.1"
                     /translation="MRWQGRRESNNVEDRRNRPGGPSLGGPGFRLPRGKGGIILLVVV
                     VVAGYYGVDLTGLLTGQPVSQQQSTRSISPNDDEAAKFTSVILATTEDTWGQLFQKMG
                     RGYQQPKLVMYRGMTRTGCGAGQSVMGPFYCPADGTVYIDLSFYDVMKNKLGADGDFA
                     QGYVIAHEVGHHVQKLLGIEPKVRQLQQNASQTEVNRLSVRMELQADCFAGVWGHSMQ
                     QQGVLEAGDLEEALNAAQAIGDDRLQQQGQGRVVPDSFTHGTSEQRYSWFKRGFDSGD
                     PAQCNTFGKNF"
BASE COUNT         1343 a         1441 c         1682 g         1321 t
ORIGIN      
        1 tctatcgatt tgtccggttg tcacccattg ctgcgtaagg tatcgataac cgtggcgtgt
       61 gatgtcaaca atccgctgtg tggtccccag ggcgcatcgg ccatctttgg cccacaaaaa
      121 ggggcgacag cggaaatggt gaactccctg gacgcggcgc tggaaaactg gggccgacat
      181 atttatcagg caacgggacg tgaggtgatt aacgctcccg gcgcgggcgc ggcaggcgga
      241 atgggcgccg cgcttttagg gttgctcaat gcggaattac gcgccggcgt agagattgtc
      301 gtggaaacgc tacagcttga gcaggcggtt aaagatgccg atctggtgat taccggagaa
      361 gggcggctgg acagccaaag tatttgcggc aagacgccga ttggcgtcgc cagagtggcg
      421 aagcggcatc ataaaccggt tatcgcgctc gccggtgggc tgcaacacga tcatcacgtt
      481 gtgtatcagc agggtatcga tgcggcgcta tcgattttgt cgcatatcgt tacgctgccg
      541 gaagccttac acgaggcgga atataacctg agcctgtcgg cgcgcaatgt ggcggcgata
      601 tggcgtctgg cgcggcaagc ctgacggcgc attccctttc caggccgcac atcagcgcgg
      661 cctgaggctt ttacgcgttt tctttcagcc agttcagcac cacatcatgg tgattgctgg
      721 ttttaaaatc attaaagacg tgctcaatct taccatcagc gtcaatcaaa aagctgatgc
      781 ggtgaatgcc gtcatacgtt ttgcccataa acgacttttc gccccagacg ccaaactgtt
      841 cacacacctg atggttttca tcggacaaaa gggtaaagtt cagcagctct ttttcagcga
      901 aacgggagag tttttcaggt ttatcggtgc tgatgcccag cacgtccacg cctgcttttt
      961 taagctcgtc catgttatcg cgtaagccgc aggcctgcac ggtacagccg ggtgtcatgg
     1021 cttttgggta gaaataaacc agaacgcgct gcccctggaa gtcggtcaaa tttacttgtt
     1081 ccccgtcttg atccggcaag ctaaatttcg gtgcgatatc accggctttc agtggattca
     1141 ttacttaact ccatcctgtt catcatgttg tgagtaattg acgacgttta tactgccttg
     1201 cgcattgagt tctgtacata gtgctttaaa ggcttgctca atatttgcgg aattttgcga
     1261 cgccgggcta tgtgcggtga tttgaataaa taattgcgca gctttatcat cttcagccgg
     1321 ctgcgtgcgg gagaccagct ccgcaatatt catttcatga ctattaaaca gcgcggtgaa
     1381 tcgctcaatt aaatgcgggg agtcggcgac ctcaacctga acccataccg tcgcgggcat
     1441 tgccgggcgg gggcggtcgg acgtccgttt catcacaatc agcagatcca gctccgcgcc
     1501 ttttaacggc aatgtcgatt caatcaaggt aatcgcgttc cacgtgccgg acaacagcat
     1561 aataaacgtg aattcatcgc ccagcatcgc cagtcggctg tcttcgatat tacagccgca
     1621 actgctgaca tggcgagtaa tggtattcac aataccgggc ctgtcggcgc ccagcgcagt
     1681 gataaccaaa tagtgttgtg atgacggtgt caaaccagtt attcctttga gcggtgaggt
     1741 aatcttaagg aaaccataaa aaaaacctgc atacaacaat cagaacggct ttggtcgctt
     1801 gcttttattg tcataccaaa cgtaccattg agggacttgt ttgcacagag gatggcccat
     1861 gttcacggga agtattgtcg cgcttgttac gccgatggat gagaaaggta acgtcagtag
     1921 gtcttgcctg aaaaaactca ttgattatca tgtcgccaac ggtacctcgg cgattgtttc
     1981 ggttggcacc accggcgagt ctgccacgct aagccatgat gaacatggcg atgtcgtgat
     2041 gatgacgctg gaactggctg acggacgtat tccggttatc gctggcacgg gcgcaaacgc
     2101 gaccgcggaa gcgattagcc tgacgcagcg ttttaacgat agcggcattg ttggctgcct
     2161 gacggtaacg ccgtactaca atcgccccac gcaggaaggt ttgttccagc atttcaaagc
     2221 catcgcggaa cacactgact tgccgcaaat tctgtataat gtgccgtccc gtaccggttg
     2281 cgacatgttg ccggaaaccg tgggtcgtct ggcggaaata aaaaatatta tcgctatcaa
     2341 agaggcgaca gggaacttaa cccgcgttca ccagatcaaa gagctggttt cagacgattt
     2401 tattctgctt agcggcgatg acgcgtccgc gctggacttt atgcaactgg gtggtcatgg
     2461 cgtgatttcc gttactgcta acgtagcggc gcgcgatatg gctgacatgt gcaaactggc
     2521 ggcggaaggg caatttgccg aggcgcgcgc tatcaaccag cgtctgatgc cgttacacaa
     2581 caaactattt gtcgaaccca atcctatccc ggtgaaatgg gcatgtaagg cattgggtct
     2641 tgtggcgacc gacacgctgc gcctgccaat gacgcctatc accgaccatg gtcgtgacat
     2701 cgtcaaagca gcgcttcagc atgctggcct gctgtaaagt ttagggagat ttgatggctt
     2761 actcagtaca aaagtcgcgc ctggcgaagg ttgcgggtgt ttcgcttgtt ttgctgctcg
     2821 ctgcctgtag ttccgattcg cgctacaagc gccaggtaag cggcgatgaa tcctatctgg
     2881 atgccgcgcc gcttgctgaa cttcacgccc cggcaggaat gattctgccg ataacgaccg
     2941 gcgactacgt tattccggtc acgaagggga gcggcgcggt tggtaaggcg ttggatatcc
     3001 gtccgccggc gcagccgtta gcgttagtga gcggcgcgcg tacccagttc tctggcgata
     3061 ccgctacgct attggtggaa aatggccgta gcagcacgct gtggccgcaa gtcgtcagcg
     3121 tgattcaggc gaaaaattat ccgattgaaa aacgtgacga tgccagccag accctgacga
     3181 ccgattgggt gagctggaac cgcctggatg aagacgaaca gtatcgcgga cgttatcaaa
     3241 tctcggtgaa gccgcagggc tatcagcagg cggtaacggt aaaactggtt aatctggaac
     3301 aggctggcaa gccggtcgct gatgcggcgt cgctgcagcg ctatagcact gaaatgatga
     3361 acgtcatttc cgccggtctg gataagaccg ctacggatgc ggcaaatgcc gcgcagaacc
     3421 gttccgccgc aacgatggat gtgcagagcg ccgctgatga taccggttta cctatgctgg
     3481 tcgttcgcgg tccgttcaac ctcgtgtggc agcgtctccc ggccgcgctg gaaaaagtgg
     3541 gcatgaaagt caccgacagc actcgctctc agggcagcat ggcggtaacg tacaaaccgt
     3601 tgtctgacag cgactggcgg gatctgggcg ctagcgaccc gggcctggca tccggagact
     3661 ataaattgca ggtcggcgat ttagataacc gcagcagctt gcagtttatc gatcctaagg
     3721 ggcatactct gacgcaaagc cagaacgacg cgctggttgc cgtcttccag gctgcgttca
     3781 acaagtaatt taacagggct ggagcaatcc ggcccttttt tctgataaga tacgcaaacg
     3841 tgtgcgtcgg tacaaaaacg cgatttaacc gctatttcgc accacaatta caggccggcg
     3901 tctctggcag gcgtagcagg aaatgaatac ttatcgttaa ttcacaccca ggagtgttaa
     3961 agatgcaaaa gcaagctgag ttgtatcgtg gtaaagcgaa aaccgtatac agcacggaaa
     4021 acccggacct gttggtgctc gaattccgca atgatacgtc agcaggggat ggcgcgcgca
     4081 ttgaacagtt tgatcgcaaa ggcatggtaa ataacaaatt caaccatttc attatgacca
     4141 aactggccga ggcgggcatc ccgacccaga tggaacgttt gctgtctgat accgagtgtc
     4201 tggtgaagaa gctggagatg gtgccggttg aatgtgtggt gcgcaaccgt gcggcagggt
     4261 cgctggtcaa gcgtctgggc gtggaagaag gcatggagct taacccgccg atcttcgatc
     4321 tgttcctgaa aaacgacgcg ctgcacgacc cgatggtgaa tagttcctac tgtgaaactt
     4381 tcgggtgggt aagccaggaa aatctggcgc gtatgaaaga gctaacctac aaagccaacg
     4441 acgtactaaa aaaactgttt gatgacgcgg gtcttatcct ggtggatttc aaactggagt
     4501 ttggcctgta taaaggcgaa gtggtgctgg gcgatgagtt ttcaccggac ggtagccgcc
     4561 tgtgggataa agagacgctg gacaaaatgg acaaagaccg cttccgccag agcctgggcg
     4621 gtctgattga agcctatgaa gccgttgcgc atcgcctggg cgtgaaatta gattaattcc
     4681 gcttctgacc gggggggcaa ccgctctccg gtatcatcct ttcctcattc tgatagcgtt
     4741 tacctgtggt aatcctgcgc ctgaccgcct acgatcatct gtataacaaa gagagaatga
     4801 ggtgattatg cgctggcaag ggcgtcgtga aagtaacaat gtagaggaca gacgtaatcg
     4861 gccaggcggc ccctcgctgg gtggccctgg ctttcgtctt ccgcgcggga aaggcggcat
     4921 cattctgttg gtggtggtgg tggtcgcagg gtactatggg gtggatttaa ccggtctgtt
     4981 gactggtcag ccggtttcgc agcagcagtc gacgcgttcg ataagcccca atgatgatga
     5041 agcggcaaaa tttacctcgg tgattctggc gacgaccgaa gatacctggg ggcaactctt
     5101 tcaaaaaatg gggcgcggct atcagcagcc aaaactggtg atgtaccgtg gtatgacgcg
     5161 taccggctgt ggtgcgggtc agtccgtgat ggggccgttt tactgcccgg cggacggcac
     5221 cgtctatatc gatctctcat tttacgatgt tatgaaaaat aagctgggcg cggacggtga
     5281 ttttgcccag ggttatgtta tcgcccacga agtcggccac cacgtacaaa aactgttagg
     5341 cattgagccg aaagtacgcc agttacaaca aaacgcgtcg caaacggagg tgaatcgcct
     5401 ttcggtgcgc atggagctac aggcggattg ctttgccggc gtgtggggac acagtatgca
     5461 gcagcaaggc gtactggagg cgggcgatct ggaagaggcg ctcaatgccg cacaggctat
     5521 cggcgacgat cgcttacagc aacaggggca ggggcgcgtg gtgccggata gttttaccca
     5581 cggcacctca gaacagcgct acagctggtt taagcgtgga tttgacagcg gtgacccggc
     5641 gcaatgtaat acgtttggta aaaacttttg ataaactggg gcagggatgt ctgatatcga
     5701 tgcgctacgg gcgttaacgt cgcaaatgac acaggaaggc attcgccgtt tactggtcat
     5761 cagcggcgat gcggcgtggt gccggga
//
LOCUS       DAGWFR010000218         5784 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.221, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000218 DAGWFR010000000
VERSION     DAGWFR010000218.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 5784)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5784)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5784
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.221"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..573
                     /gene="rbsC"
                     /locus_tag="MOX77_004170"
     CDS             <1..573
                     /gene="rbsC"
                     /locus_tag="MOX77_004170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002882531.1"
                     /note="functions to transport ribose at high affinity;
                     forms a complex with RbsA2C2B; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose ABC transporter permease"
                     /protein_id="HCA3359566.1"
                     /translation="VMMLLLRGVTMVYTDGSPVNTGFTDNADLFGWFGIGRPLGVPTP
                     VWIMAIVFIAAWYMLHHTRLGRYIYALGGNEAATRLSGISVSKVKIIVYSLCGLTASL
                     AGIIEVARLSSAQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNG
                     LNLLGVSSYYQMIVKAVVILLAVLVDNKKQ"
     gene            598..1488
                     /gene="rbsB"
                     /locus_tag="MOX77_004171"
     CDS             598..1488
                     /gene="rbsB"
                     /locus_tag="MOX77_004171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose ABC transporter substrate-binding protein
                     RbsB"
                     /protein_id="HCA3359567.1"
                     /translation="MNMKKLATLVSAVALSATVSANAMAKDTIALVISTLNNPFFVSL
                     KDGAQKEADKLGYNLVVLDSQNNPAKELANVQDLTVRGTKILLINPTDSDAVGNAVKM
                     ANQAKIPVITLDRQATKGDVVSHIASDNVLGGKIAGDYIAKKAGEGAKVIELQGIAGT
                     SAARERGEGFQQAVAAHKFNVLASQPADFDRTKGLNVMQNLLTAHPDVQAVFAQNDEM
                     ALGALRALQTAGKADVMVVGFDGTPDGEKAVKDGKLAATIAQLPDQIGAKGVEVADKV
                     LKGEKVQAKYPVDLKLVIKQ"
     gene            1621..2550
                     /gene="rbsK"
                     /locus_tag="MOX77_004172"
     CDS             1621..2550
                     /gene="rbsK"
                     /locus_tag="MOX77_004172"
                     /EC_number="2.7.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribokinase"
                     /protein_id="HCA3359568.1"
                     /translation="MKTAGNLIVLGSINADHILNLESFPTPGETVTGSHYQVAFGGKG
                     ANQAVAAGRSGANIAFIACTGDDDIGDSIRKQLVSDRIDIAPVSVIKGESTGVALIFV
                     NGEGENVIGIHAGANAALSPALVDAQRERIAQADALLMQLESPLESVLAAAKIAHQHH
                     TTVALNPAPARELPDELLALVDIITPNETEAEKLTGVRVENDDDVAKAAQVLHDKGIR
                     TVLITLGSRGVWASVNGEGRRVPGFSVEAVDTIAAGDTFNGAFITAILEETPLPEAIR
                     FAHAAAAIAVTRKGAQPSVPWREEIEAFLHQQG"
     gene            2554..3552
                     /gene="rbsR"
                     /locus_tag="MOX77_004173"
     CDS             2554..3552
                     /gene="rbsR"
                     /locus_tag="MOX77_004173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose operon transcriptional repressor RbsR"
                     /protein_id="HCA3359569.1"
                     /translation="MATMKDVARLAGVSTSTVSHVINKDRFVSETITEKVEAAIKSLN
                     YAPSALARSLKLNQTRTIGMLITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQ
                     RMNRNLETLMQKRVDGLLLLCTETHQPSREIMERYPSIPTVMMDWSPFDGEGDSDLIQ
                     DNSLLGGDLATQHLIDKGFTRIACITGPLDKTPARLRLEGYRAAMKRAGLAIPQGYEI
                     TGDFEFGGGFDAMQALLAHQQRPQAVFTGNDAMAVGAYQALYQAGLRIPQDMAVIGYD
                     DIELARYMTPPLTTIHQPKDELGELAIDVLIHRMAQPALQQQRLQLTPVLTVRGSV"
     gene            complement(3518..4945)
                     /gene="mdtD"
                     /locus_tag="MOX77_004174"
                     /pseudo
     CDS             complement(3518..4945)
                     /gene="mdtD"
                     /locus_tag="MOX77_004174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462786.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug transporter subunit MdtD"
     gene            complement(4957..5661)
                     /locus_tag="MOX77_004175"
     CDS             complement(4957..5661)
                     /locus_tag="MOX77_004175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FadR family transcriptional regulator"
                     /protein_id="HCA3359570.1"
                     /translation="MPLSAQQLAAQKNLSYVLAEKLAQRILKGDYAPGTILPGEIELG
                     EQYGVSRTAVREAVKTLTAKGMVLPRPRIGTRVMPQGNWNFLDQELLTWWMTEENFHQ
                     VVDHFLVMRISLEPQACLLAATLGTPEQKARLNALMEEMVALKKHFKRERWIEVDMAW
                     HEHIYEMSANPFLISFATLFHSVYHTYFTSITYNEVVKLDLHQAIVDAIADGDGERAF
                     QACQALLIAPNERPDN"
BASE COUNT         1422 a         1472 c         1588 g         1302 t
ORIGIN      
        1 gtgatgatgc tgctactgcg tggcgtgacg atggtttaca ccgacggtag cccggtcaac
       61 accggcttta ccgataacgc cgatctgttt ggctggttcg gtatcggtcg tccgctgggc
      121 gttcctacgc cggtctggat catggctatc gtctttatcg ccgcctggta tatgctgcat
      181 cacacccgtc tgggacgcta tatctacgcg ctgggcggta acgaagcggc gacgcgtctg
      241 tctggcatta gcgtgagcaa agtgaaaatt atcgtctatt cactttgcgg cctgacagca
      301 tcgctggcgg gcatcattga agtggcgcgc ctctcttccg cgcagccgac ggcgggtacc
      361 ggctatgagc tggatgctat tgccgccgtg gtgctgggcg gcaccagcct tgcaggtggt
      421 aaagggcgca ttgttgggac attgatcggc gcattgattc tcggcttcct taataatggt
      481 ttgaatttgt taggtgtttc ctcctattac cagatgatcg tcaaagcggt ggtgattttg
      541 ctggcggtac tggtagacaa caaaaagcag taacaacgac tacaggacat ctgaaatatg
      601 aacatgaaaa aactggctac cctggtatct gctgttgcgc tgagcgccac cgtgagcgcg
      661 aatgcaatgg cgaaagacac cattgcgctg gtgatctcta ccctcaataa tcccttcttc
      721 gtgtcgttaa aagacggggc gcaaaaagag gcggataaac tgggttataa cctggtggtg
      781 ctggactccc agaacaaccc tgccaaagag ctggcgaacg tgcaggattt aaccgttcgc
      841 gggaccaaaa ttttgctgat caacccgact gactccgatg cggtgggtaa cgcggtgaag
      901 atggcgaacc aggcgaagat tccggttatc acgcttgacc gccaggcaac caaaggcgat
      961 gtcgtcagcc atatcgcgtc tgataacgtg ctgggcggta agatcgctgg cgactatatc
     1021 gcgaaaaaag ctggcgaagg cgccaaagtg attgagctgc aaggcattgc cggaacatct
     1081 gcggcgcgtg agcgtggcga aggtttccag caggcggtag ccgcccacaa atttaatgtc
     1141 ctggccagcc agcctgccga tttcgaccgt actaaaggtc tgaacgtcat gcagaacctg
     1201 ctgaccgcgc atccggatgt tcaggctgtc ttcgcccaga acgatgaaat ggcgctgggc
     1261 gcactgcgcg cgctgcaaac tgccggtaaa gcagatgtga tggtggttgg atttgacggt
     1321 acgccggatg gcgaaaaggc cgtaaaagat ggcaaactgg cagcgactat cgctcagtta
     1381 ccggatcaaa tcggcgccaa aggcgttgaa gtagcggata aggtgctgaa aggcgaaaaa
     1441 gttcaggcca aatatccggt tgacctgaaa ctggtcatca agcagtaata aacgacacgg
     1501 gtcaactatg gcctgatggc gacagaaata cgcgagcctc cgctgaggtg aacgtaaaaa
     1561 aagaaaagca gggcacgcgc caccctaacc ggtggcgcac tttgacgtgg aaccccgaat
     1621 atgaaaaccg caggtaatct catcgtcctt ggcagcatta atgccgatca tatccttaat
     1681 cttgagtcct tccctacccc gggtgaaacg gtaaccggta gccattatca ggtcgcgttt
     1741 ggcgggaaag gcgcgaatca ggcggttgct gcgggacgta gcggggcaaa tattgcgttt
     1801 atcgcctgca cgggcgatga cgatattggc gacagtattc gtaaacaatt agtcagcgat
     1861 cgtattgata tcgcgccagt tagcgtcatt aaaggcgagt ctaccggggt agcgctgatt
     1921 ttcgttaatg gcgaaggcga gaacgtcatc ggtattcatg ccggagcgaa tgccgcgtta
     1981 tcgccggcgt tggttgatgc gcaacgtgaa cgtatcgcgc aggcggatgc gttactgatg
     2041 cagctggaat cgccgctgga aagcgtactg gcggcggcga aaatcgccca tcaacatcat
     2101 actactgttg cgcttaaccc ggcacctgcc cgtgagttac cggatgaact gctggcgctg
     2161 gtggacatca tcacgccaaa tgaaacggaa gctgaaaagc tgacgggcgt gcgtgtggaa
     2221 aatgacgacg atgtcgcgaa agctgcgcag gttttacatg ataaaggcat tcgaaccgta
     2281 ttaattacct taggaagccg tggcgtctgg gccagcgtaa acggcgaggg tcgccgcgtt
     2341 cctggattta gcgttgaggc tgtcgatacc attgccgccg gagatacgtt taacggcgcc
     2401 tttatcaccg cgatactgga ggagacgccg ttgccggaag cgattcgctt tgcccatgcc
     2461 gccgccgcga ttgccgtaac gcgtaaaggc gcgcaacctt ccgttccgtg gcgcgaagag
     2521 atagaagcgt ttttacatca gcaggggtaa cgcttggcta ctatgaaaga tgttgcccgc
     2581 ctggcgggag tctctacatc gacggtctct cacgttatta acaaagatcg ctttgtgagt
     2641 gagacgatta ctgaaaaagt tgaagcggcg attaaatcac ttaactatgc gccttccgcg
     2701 ctggcgcgaa gcctcaagtt aaaccagacc cgcacgattg gtatgctgat taccgccagt
     2761 accaaccctt tttattccga actggtgcgc ggcgttgagc gaagctgttt tgagcgcggt
     2821 tatagtctgg tgctgtgtaa taccgaaggc gatgagcaac ggatgaaccg caacctagag
     2881 acgctgatgc aaaaacgggt agacggttta ctgctgctgt gtactgaaac gcatcagcct
     2941 tctcgtgaaa tcatggaacg ttatccgtct attcctaccg tcatgatgga ctggtcgccg
     3001 tttgatggtg agggcgatag cgatctcatt caggataatt cgttgttagg cggcgatctt
     3061 gcgacccaac accttatcga taaaggattt acccgaatag cctgtattac cggcccgctg
     3121 gacaaaacgc ctgcgcgttt gcggctggaa gggtatcggg cggcgatgaa acgcgcaggg
     3181 ctggctattc cgcaaggcta tgagatcacc ggcgattttg aatttggcgg cggctttgac
     3241 gccatgcagg cgttactcgc ccatcaacag cgaccgcaag cggtttttac cggaaacgat
     3301 gcgatggctg tcggcgccta tcaggcgcta tatcaggcgg ggcttcgtat cccgcaagat
     3361 atggcagtca ttggctatga tgatattgag ctagcgcgct atatgacgcc gccgctgacg
     3421 actatccatc agccgaaaga tgaattgggc gagcttgcta ttgatgtgtt gattcatcgg
     3481 atggcgcagc ccgccttgca acaacagcga cttcagctta ctccggtttt gacggtgcgt
     3541 gggtcggttt agatttatgc cgttctttaa tcagattgtt gccgtctttg gctcttagca
     3601 gcataaacat cagcgcggac acgatagtga tcgcccccat cgtgataaag gtatagtgga
     3661 actgttccac ggtactggtg cccgcaaaac cttcataaat acgtaacacc gccgcgctga
     3721 tcgccacgcc taaactgata gacaattgct gcgtaactgc cagaacgctg ttgccgctgc
     3781 tggcgttatc gtccgtcaga tccgcaagag taatcgtatt cattgccgta aattgagtgg
     3841 acatcgccat tccaagaatg aatagcggca gtacgagcat ccagatcggc atagcgggag
     3901 attgaaacga aaactgggca atcatcagac cgataaatac cgtaatgccg accagcgtct
     3961 tcctgtatcc caaacgtcgt aaaacctgcg ttacggtcga tttcgcgata atagaaccca
     4021 aagccgtcgg cgccatcatg cagccggcga tcagagccgg gtagccaaaa ccaacctgta
     4081 gcattaacgg catcaaaaaa ggtacgcagc ctgtccccag acgcgtggcg aggttgccgg
     4141 caatgccaac ggaaaatgtg cgtgtcttaa acagcgatag tgatattaac ggtgtcggat
     4201 gacggcgggc gtggcggata taggccaata gtagaacgat actgcaaaaa ataatggcgg
     4261 atgcgatcca tgtcgccaca atcttttcgc caaacagttc cattccgctg gaaaataaaa
     4321 ccagacttaa cccaaaaaga aagaagccgg tcatgtcaaa cttgcgacgc ggcgtggtga
     4381 agttgggcat atatttgcgg gcatacagaa tgcctgcaac cccaatggga atattaatca
     4441 ggaagatcca gtgccagctt gcctaggtca ccagtacgcc gcctaatacc ggccccagaa
     4501 tcggacctac cagccccggc atagtgacaa agttaagaac gggcagcagc tcactacgcg
     4561 gataggctcg caataacgcc agtcgcgcca ctggcatcat catcgctccg ccgacgcctt
     4621 gtacgacgcg aaaaataacc aattcagata gtgaactgga gagcgcgcag gccagcgagc
     4681 ctaacgtaaa cagacttacg gcaaccataa agacgcgacg cgtaccgaag cggtcagcca
     4741 gccagccgct taccggaatt aacatggcta ctgtcagggt ataactgata atagcggact
     4801 gcatggcgag tggtgaacag ttaagactat gcgcaatagc cggtaaagcg gtattcaaaa
     4861 tggtggcgtc tagcgcctgc ataaagaagg ccatcgccgc gatccacggc aggccagcca
     4921 tactgcgcgc ttttttgctg gtcattcaat atcctgttaa ttatctggtc tctcattggg
     4981 cgctattaac aacgcctgac aggcctggaa agcgcgttcg ccgtcgccat cagcgatggc
     5041 atcaacaatg gcctggtgca aatccagctt taccacctcg ttataggtga ttgaggtaaa
     5101 gtaagtgtga taaaccgaat gaaatagcgt agcaaaagag attagaaagg gattggcgct
     5161 catttcgtag atatgctcgt gccacgccat atccacttca atccagcgtt cacgcttaaa
     5221 atgctttttc agcgcgacca tctcttccat taaggcatta agccgcgctt tctgctccgg
     5281 tgtgccaaga gtcgccgcca gcaggcaagc ttgcggctcc aggctaatac gcatcaccag
     5341 aaaatgatct accacctgat gaaaattttc ttccgtcatc caccaggtca gcagctcttg
     5401 atccagaaag ttccagtttc cctgcggcat cacccgcgta ccaatgcgcg gacggggtag
     5461 caccatacct ttagccgtca acgttttcac cgcttcgcga actgccgttc gacttacgcc
     5521 gtactgctcg cccagttcta tttcgccggg aagaatcgta ccgggggcgt agtcaccctt
     5581 taatatccgc tgcgccagct tttcagccag aacataggat agatttttct gtgcggctaa
     5641 ttgttgtgcg cttaaaggca tgaatgttct tcctttctct ttcgtttggt tattagtatg
     5701 ccacctggaa gtgtgattgc agttgcaata acggcaattt gcttatttta tggcacgtta
     5761 agcccgctgt tgatgaaaaa agag
//
LOCUS       DAGWFR010000219         5775 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.222, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000219 DAGWFR010000000
VERSION     DAGWFR010000219.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 5775)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5775)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5775
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.222"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..1326
                     /gene="helD"
                     /locus_tag="MOX77_004176"
     CDS             <1..1326
                     /gene="helD"
                     /locus_tag="MOX77_004176"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase IV"
                     /protein_id="HCA3359571.1"
                     /translation="ILLLAFGRKAAEEMDERIRERLHTEEITARTFHSLALYIIQQGS
                     KKAPVVSKLESDATARHQLFLHTWRQQCSEKKAQAKGWRQWLEEEMQWVVPEGNFWDD
                     ETLQRRLAPRLDRWVSLMRMHGGAQAEMIAGAPEECRELFGKRIKLMAPLLKAWKSAL
                     KAENAVDFSGLIHQAMVILEKGRFISPWKHILVDEFQDISPQRAALLEALRKQNSQTT
                     LFAVGDDWQAIYRFSGAQLSLTTAFHQTFGEGEHCHLDTTYRFNSRIGDIANRFVQQN
                     PHQLKKPLNSLTPGDKKAVTLLDESQLDALLDKLSGYAKEDERILVLARYHHLKPASL
                     QKAATRWPKLQIDFMTIHASKGQQADYVILVGLQEGNDGFPAPARESIMESALFPQVE
                     DFPDAEERRLLYVALTRARARVWLLFNKDNPSRFVEALKQLDVPVARKP"
     gene            complement(1362..1820)
                     /gene="mgsA"
                     /locus_tag="MOX77_004177"
     CDS             complement(1362..1820)
                     /gene="mgsA"
                     /locus_tag="MOX77_004177"
                     /EC_number="4.2.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylglyoxal synthase"
                     /protein_id="HCA3359572.1"
                     /translation="MELTTRTLPTRKHIALVAHDHCKQMLMNWVERHQPLLEKHVLYA
                     TGTTGNLIQRATGMDVNAMLSGPMGGDQQVGALISEGKIDVLIFFWDPLNAVPHDPDV
                     KALLRLATVWNIPVATNVSTADFIIQSPHFNDAVDILIPDYARYLAERLK"
     gene            complement(1915..2577)
                     /locus_tag="MOX77_004178"
     CDS             complement(1915..2577)
                     /locus_tag="MOX77_004178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2057 family protein"
                     /protein_id="HCA3359573.1"
                     /translation="MKTGALATFLALCLPVTVFATTLRLSNEVDLLVLDGKKVSSSLL
                     RGAESIELENGPHQLVFRVEKTIRLPGNEERLYISPPLVISFDTQLISQVNFQLPRLE
                     NEREASHFNAAPRLALLDGDAMPIPVKLDILAITSTAKVVDYEIETERYNKSAKRASL
                     PQFATMMADDSTLLSDVSELDTVPPQSQTLTEQRLKYWFRLADPQTRHHFLQWAEKQP
                     PS"
     gene            2751..3164
                     /locus_tag="MOX77_004179"
     CDS             2751..3164
                     /locus_tag="MOX77_004179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HCA3359574.1"
                     /translation="MKETDIADVLTSTRTIALVGASDKPDRPSYRVMKYLLEQGYHVI
                     PVAPKVAGKTLLGQQGYATLADIPEKVDMVDVFRNSEAAWGVAQEAIAIGAKTLWLQL
                     GVINEQAAVLARDAGMTVVMDRCPAIEIPRLGLAK"
     gene            complement(3209..3526)
                     /gene="hspQ"
                     /locus_tag="MOX77_004180"
     CDS             complement(3209..3526)
                     /gene="hspQ"
                     /locus_tag="MOX77_004180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock protein HspQ"
                     /protein_id="HCA3359575.1"
                     /translation="MIASKFGIGQQVRHSLLGYLGVVVDIDPEYSLDEPSPDELAVND
                     ELRAAPWYHVVMEDDDGQPVHTYLAEAQLRSEMRDEHPEQPSMDELARTIRKQLQAPR
                     LRN"
     gene            complement(3584..4795)
                     /gene="rlmI"
                     /locus_tag="MOX77_004181"
     CDS             complement(3584..4795)
                     /gene="rlmI"
                     /locus_tag="MOX77_004181"
                     /EC_number="2.1.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (cytosine(1962)-C(5))-methyltransferase
                     RlmI"
                     /protein_id="HCA3359576.1"
                     /translation="MTESTFPQYPRLVLSKGREKSLLRRHPWVFSGAVSRLEGKANLG
                     ETIDIVDHQGKWLARGAWSPASQIRARVWTFDKTESIDIAFFTRRLRQAQQWRDWLAK
                     KDGLDSYRLIAGESDGLPGVTIDRFGHFLVLQLLSAGAEYQRAALISALQTCYPDCAI
                     YDRSDVAVRKKEGMALTQGPVTGELPPALLPIEEHGMKLLVDIQGGHKTGYYLDQRDS
                     RLVTRRYVENQRVLNCFSYTGGFAVSALMGGCRQVVSVDTSQDALDIARQNVELNQLD
                     LSKAEFVRDDVFKLLRAYREHGEKFDVIIMDPPKFVENKSQLMGACRGYKDINMLAIQ
                     LLNPGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFIEQFRQAADHPVIATYPEG
                     LYLKGFACRVM"
     gene            5010..5557
                     /locus_tag="MOX77_004182"
                     /pseudo
     CDS             5010..5557
                     /locus_tag="MOX77_004182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460055.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YbhB/YbcL family Raf kinase inhibitor-like
                     protein"
     gene            5583..>5775
                     /locus_tag="MOX77_004183"
     CDS             5583..>5775
                     /locus_tag="MOX77_004183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HCA3359577.1"
                     /translation="MHIRHQDLTTAEVRSSHLHRLHRVTLFSAAICHITQGSKVIIQD
                     DSRLVAGPGELIIIPANTPL"
BASE COUNT         1354 a         1439 c         1634 g         1348 t
ORIGIN      
        1 attcttttac tggcgtttgg tcgcaaggcg gcagaagaga tggatgagcg tatccgcgag
       61 cgcttacata cggaagagat tactgcccgt acgttccatt cgctggcgct gtatattatt
      121 cagcaaggca gtaaaaaagc gccggttgtc agtaagctgg aaagtgacgc caccgcgcgg
      181 catcagctat ttctgcacac ctggcgtcag cagtgtagcg agaaaaaagc gcaggccaaa
      241 ggctggcgtc agtggctgga agaggagatg cagtgggtag tgccggaagg taatttctgg
      301 gacgatgaga cattgcagcg gcgtctggcc cctcgcctgg atcgttgggt cagtttgatg
      361 cgtatgcacg gcggcgcgca ggcagaaatg atcgctggcg cgccagagga gtgccgcgag
      421 ctgtttggca aacgcattaa gttgatggcg ccgctgctga aggcctggaa aagcgcattg
      481 aaagcggaaa atgccgttga tttctccggg ctgatccatc aggcaatggt gatcctcgaa
      541 aaagggcgtt ttattagccc gtggaagcat attctggtcg atgaatttca ggatatttcc
      601 ccgcaacggg cggcgctgtt agaggcgcta cgcaagcaga atagccagac tacgctgttt
      661 gccgttggcg atgactggca ggcgatttac cgttttagcg gggcgcagct ctccttaacg
      721 acggcgtttc atcagacgtt cggcgagggc gagcattgtc acctggacac cacgtaccgt
      781 tttaacagtc ggattggcga tattgccaat cgctttgtac agcagaatcc gcaccaactt
      841 aaaaaaccgt taaatagtct gaccccaggc gataaaaaag cggttacgtt attggatgaa
      901 agccagttgg acgcgttact ggataaatta tccggctatg cgaaggagga tgaacgtatc
      961 ctggtgctgg cgcgctatca ccatctgaaa cccgcgagtc tacaaaaagc ggcgactcgc
     1021 tggccgaagt tacagataga tttcatgact atccatgcca gcaaaggcca acaggccgat
     1081 tacgtgattc ttgtcggatt gcaggagggt aacgacggtt tccccgcccc ggcgcgagaa
     1141 tccattatgg aaagtgcgct ttttcctcag gttgaggatt ttccggacgc tgaagagcgg
     1201 cgtttgttat atgtggcgtt gacgcgcgcg cgtgcgcggg tctggctgct tttcaataaa
     1261 gataatccct cgcgctttgt ggaggcgctt aaacagctgg atgtgccggt ggcgaggaag
     1321 ccctaaagcg cgggcggtat agcatcccgc ccgcgtagcg gttatttcag gcgctcggcc
     1381 agataacgcg cataatccgg aataagaata tctacagcgt cattaaaatg cggggactgg
     1441 atgataaagt ccgccgttga gacattagtg gcgacaggga tattccatac agtggccaga
     1501 cgcagtagcg ctttgacatc ggggtcgtgc ggtaccgcgt taagcgggtc ccagaagaaa
     1561 atcaacacgt cgattttccc ttctgaaatg agcgcgccaa cctgctggtc gccgcccatc
     1621 gggccgctca gcatcgcatt aacgtccata ccggttgcgc gctggatcag attccccgtg
     1681 gtgccggttg cataaagaac gtgtttttcc agcaacggct gatggcgttc cacccagttc
     1741 attaacatct gtttgcagtg gtcgtgagca accaacgcga tatgtttgcg cgtcggcaag
     1801 gtgcgagtcg tcagttccat aattcgattc cgtagttaac ctgtctacag attactggaa
     1861 gcgcttgatg ctgcaagaga aagacaaaaa aattgcgcgc tgggacaact catatcaaga
     1921 gggcggctgt ttttccgccc attgcagaaa atgatggcgt gtctgcgggt cggccagtcg
     1981 gaaccaatat ttcagccgct gttctgtcag agtttgtgat tgcggcggta cggtatcaag
     2041 ctctgagacg tcggaaagta atgtgctgtc gtctgccatc atcgtggcga actgaggaag
     2101 cgaggcgcgt ttcgccgatt tattataacg ctcggtctct atttcgtaat cgaccacttt
     2161 agccgtagaa gtaatggcca gaatatcgag ttttaccgga atgggcatgg cgtcgccgtc
     2221 caaaagcgcc agacgcggcg ccgcgttaaa atgcgaggct tcgcgctcgt tttccagccg
     2281 cgggagctga aaattgacct gacttatcag ctgggtatcg aagcttatca ccagcggcgg
     2341 agaaatataa agccgctctt cattaccggg caggcggatg gttttttcca cccggaaaac
     2401 gagttgatgc ggcccgtttt ccagttcgat gctctctgcg ccgcgtaata aagagctgga
     2461 cacctttttg ccgtccagca ccagcagatc aacctcatta gacaaacgga gcgttgtggc
     2521 aaaaacagtc accggcaaac agagagcaag gaaggtggct agcgcgccgg ttttcataag
     2581 gttctcctgt ccaaaggccg tctggctaat aatgtatcga aatttttctt agatcatgtt
     2641 tactaacata tagacatatt ttggcgtttt gctctcatac atcggtatgg gatgaatggt
     2701 tgctatgtca ggtttgtcgt acactttgca aaacagccag gagaaagatg atgaaagaga
     2761 ccgatattgc tgatgttttg acgtccactc gcactatcgc gctggtaggt gcgagcgata
     2821 aacccgatcg tccaagctat cgggtaatga aatacctgct tgaacagggc taccatgtga
     2881 ttccggttgc gccaaaagtc gcgggtaaga cattgctggg gcaacagggg tatgccacgc
     2941 tggcggatat tcccgaaaaa gtcgatatgg tggatgtttt tcgcaactct gaagctgcat
     3001 ggggcgtcgc gcaggaagct atcgccatcg gcgcaaaaac gctgtggcta cagcttggcg
     3061 tgatcaacga acaggcggcg gtactggcgc gggatgcagg catgactgtg gtgatggatc
     3121 gctgcccggc gattgagatc cctcgcctgg ggctggcgaa ataaaagttt aaatggccgg
     3181 atatcgctct ccggcctttt acatacaatc agttacgtag tcgcggcgcc tgaagctgct
     3241 tgcgaatggt acgcgccagt tcatccatcg atggctgttc tggatgctcg tcccgcattt
     3301 cgcttcgcaa ctgggcctcg gccagataag tatgcactgg ctgaccatca tcatcttcca
     3361 ttaccacgtg gtaccacgga gcggcgcgaa gttcgtcgtt aaccgccagt tcatcaggcg
     3421 acggctcatc aagcgaatat tccgggtcga tatcgacgac cactccgagg taacctaaca
     3481 gggaatggcg gacctgttgg ccgataccga atttgctggc tatcatagtc acctcccggg
     3541 aaatagatac cctttatatg aggatactat tccacttttc aagttacatg acgcgacagg
     3601 caaacccttt cagatacagc ccttccgggt aggtggcgat caccgggtga tcggcggcct
     3661 gacggaactg ctctataaat tgtacatcac gaccggcatc tattgcggca tcggcaatga
     3721 ttttctgaaa taaatcgctg gtcatcagtc cggagcaaga gaatgtcagc agtatgccgc
     3781 ccggattgag cagttgaatc gctaacatgt taatgtcttt atagccccgg caggcgccca
     3841 ttaactggct tttattttcg acgaatttgg gcgggtccat gatgatgacg tcgaattttt
     3901 cgccgtgttc acggtaagcg cgcagcaact taaacacgtc gtcgcgcacg aattcggctt
     3961 tgctcaagtc cagttggttc agttcaacgt tttgcctggc gatatccagc gcatcctgtg
     4021 aggtatccac gctgacaacc tggcgacaac cacccattaa cgccgacacg gcaaaaccgc
     4081 cggtataaga gaagcagttc agtacccgct gattttctac gtagcggcgc gtcaccagac
     4141 gactgtcgcg ctgatcaaga taataaccgg ttttgtggcc gccctgtata tcgaccagca
     4201 atttcatacc gtgttcttca attggcaaaa gcgcaggcgg cagttcgcca gtgaccgggc
     4261 cttgcgtcag cgccatccct tcttttttcc gcacggcgac gtcgctgcga tcgtaaatag
     4321 cgcaatccgg atagcatgtt tgcagagcgc taattaatgc ggcgcgttga tattcggccc
     4381 cggcgctgag cagttgcagc accaaaaaat gaccaaaacg atcgatagtg acgccaggca
     4441 ggccatcgga ttcaccggcg atcagacgat agctatccag accgtctttt ttcgccagcc
     4501 agtcgcgcca ctgctgcgcc tggcgcaggc ggcgggtgaa aaacgcaata tcaatggatt
     4561 ctgttttatc aaatgtccag acgcgcgcgc ggatctggga ggctggcgac caggcgccgc
     4621 gtgctaacca ctttccctga tggtcgacga tatcgatagt ttcaccgagg ttggctttgc
     4681 cttccagacg ggatacggcg ccggaaaaga cccatgggtg gcggcggagt aaagattttt
     4741 ctcgcccttt gctgaggact aaacggggat attgcggaaa tgtagattca gtcatgcgga
     4801 gtaacctctc acaaacagtg acgcgagccg gatgatagtt ccagccaggg accgtgaaaa
     4861 cgaaatggcg cgtagggtag cacagatgag aggggcaatc accagcgtat ggcggtgagc
     4921 gtttctgcac aaaatagaat cgtaaaggca cagtttcttc agcggacgct ttttatagtg
     4981 ttatttcttt acatgaagaa ggaaatacaa tgaaaacagt cttctctttg accgcagccg
     5041 caatgatggc attgagtggc ggcgtatctg ccgcgtcggc gtttagcctc agtagcgcgg
     5101 atattccggc agattttcgt ttaacgcaac agcacgtctt taaaggattt ggttgtagcg
     5161 gagaaaatat ttcgccgcag ctgagctggc gcaatccgcc tgccggaacc aaaagctacg
     5221 ctattaccgt cttcgatcct gatgctccca ccggaagcgg ctggtggcac tggacgatgg
     5281 tgaatattcc tgcgcagatt cacgacctgc cgacgggggc tgataaaaaa cgttacccgc
     5341 tggagtggtg cagggacgga atgatttcgg ttatgctggc tttggcggcg cctgtccgcc
     5401 gccgggcgat gagcctcatc gctatcagtt tactgtgtgg gcgctgaata cggcaacact
     5461 gccgctcgac agtgagtcga gtggcgcgtt ggtagggttt atgcttaacg cgcatgtgat
     5521 tgcgaaagca caattcacgg ccacatacgg aaggtaaaac agaggacggc acggtgcagg
     5581 agatgcatat tcgacatcag gatcttacga cggcagaggt gcgttccagt catctgcacc
     5641 gtttgcatcg tgttacgctt ttttccgccg cgatctgcca tattacgcag ggcagtaaag
     5701 tcatcattca ggatgatagc cgccttgtcg ccgggcctgg cgagttaatt attattccgg
     5761 cgaacacgcc gctgg
//
LOCUS       DAGWFR010000220         5725 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.223, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000220 DAGWFR010000000
VERSION     DAGWFR010000220.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 5725)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5725)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5725
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.223"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..389)
                     /locus_tag="MOX77_004184"
     CDS             complement(<1..389)
                     /locus_tag="MOX77_004184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010426221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter permease DppC"
                     /protein_id="HCA3359578.1"
                     /translation="MSQVTENNVNAAPAPMTPLREFWHYFKRNKGAVVGLAYVLIVIL
                     IAVFANFIAPYNPAEQFRDALLAPPVWQEGGSWAHILGTDDVGRDALSRLMYGARLSL
                     LVGCLVVVLSLVMGIILGLVAGYFGGLV"
     gene            complement(399..1418)
                     /gene="dppB"
                     /locus_tag="MOX77_004185"
     CDS             complement(399..1418)
                     /gene="dppB"
                     /locus_tag="MOX77_004185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter permease DppB"
                     /protein_id="HCA3359579.1"
                     /translation="MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGI
                     SPERHAQLLAELGLDKPMWQQYLHYIWGVMHGDLGISLKSRIPVWDEFVPRFKATLEL
                     GVCAMIFAVAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHW
                     NLTPVSGRVSDMVFLDDTNPLTGFMLIDTAIWGEEGNFIDALAHMILPAMVLGTIPLA
                     VIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLA
                     GAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPR
                     IRHKK"
     gene            complement(1575..3182)
                     /locus_tag="MOX77_004186"
     CDS             complement(1575..3182)
                     /locus_tag="MOX77_004186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HCA3359580.1"
                     /translation="MSISLKKSGMLKLGLSLVAMTVAASVQAKTLVYCSEGSPEGFNP
                     QLFTSGTTYDASSVPIYNRLVEFKTGTTEVIPGLAEKWDISEDGKTYTFHLRKGVKWQ
                     SSKDFKPTRELNADDVVFSFDRQKNEQNPYHKVSGGSYEYFEGMGLPDLISEVKKVDD
                     HTVQFVLTRPEAPFLADLAMDFASILSKEYADNMLKAGTPEKVDLNPVGTGPFQLVQY
                     QKDSRILYKAFDGYWGTKPKIDRLVFSITPDASVRYAKLQKNECQVMPYPNPADIARM
                     KEDKNINLMEQAGLNVGYLSYNVQKKPLDDVKVRQALTYAVNKEAIIKAVYQGAGVAA
                     KNLIPPTMWGYNDDIKDYGYDPEKAKALLKEAGLEKGFTIDLWAMPVQRPYNPNARRM
                     AEMIQADWAKIGVQAKIVTYEWGEYLKRAKDGEHQTVMMGWTGDNGDPDNFFATLFSC
                     DAAQQGSNYSKWCYKPFEDLIQPARATDDHNKRIELYKQAQVVMHDQAPALIIAHSTV
                     YEPVRKEVKGYVVDPLGKHHFENVSVE"
     gene            complement(3738..5062)
                     /locus_tag="MOX77_004187"
                     /pseudo
     CDS             complement(3738..5062)
                     /locus_tag="MOX77_004187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462533.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-xanthine permease"
     gene            complement(5120..>5725)
                     /locus_tag="MOX77_004188"
     CDS             complement(5120..>5725)
                     /locus_tag="MOX77_004188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HCA3359581.1"
                     /translation="WEWRAWEHLNPEDFPIHDIFDRRHWPMINGLSVTRDGLVLMSLR
                     TTSGVIAVDKESGKVIWHAGPEVVAQQHTPVEMENGSILVFDNGNLRPGVTSPHSTVL
                     EFDPQIKAITWQYRDIFPPAFFSPYMGSAQRLANGNTFICESAFGRLFEVTPEGETVW
                     EYIIPFFNEYPEHLSKGIIPGKQNSAFRAHRYAADAISWLK"
BASE COUNT         1446 a         1597 c         1452 g         1230 t
ORIGIN      
        1 accagaccgc cgaagtagcc cgcgactagg ccgagaataa tccccatgac cagcgacagg
       61 acgaccacca gacagccgac cagcagcgac aaacgcgcgc catacatcag gcgcgagagg
      121 gcatcgcgac caacatcatc cgttcccaga atatgcgccc aactgccgcc ttcctgccag
      181 accggcggcg ccagcagcgc atcgcggaac tgctctgccg ggttgtacgg cgcaataaag
      241 ttggcaaaca ccgcaatcag gatcacgatg agaacatacg ccagcccgac gaccgcgcct
      301 ttattgcgtt tgaaatagtg ccagaactcc cgcaatggcg tcatgggcgc cggtgcggca
      361 ttaacattat tttcagtaac ctgtgacatg atggcccctt acttcttatg ccgaatacgc
      421 gggttcacca cgccgtacag caggtctacc agcaggttga cgagaataat catcgtcgct
      481 accagtaaca cgccgccctg cactaccgga taatcgcggc gttgcagcgc atcgatcagc
      541 cagcgcccca gaccgggcca cgagaagata gtttctgtca gaatcgcgcc agccaacagc
      601 gtcccgacct gcaggccgat cacggtgacg actggcagca tggcgttacg cagagcatgg
      661 acgataatga cgcgcatcct ggtcaaccct ttggcgcgtg cggtacggat gtaatcctcc
      721 cccagcactt ccagcatcga cgaacgggtc atacgcacaa tgacggccag cgggattgtg
      781 ccgagcacca tcgcaggcag gatcatatgc gccagcgcat caataaagtt accctcttcg
      841 ccccagatag cggtgtcgat cagcataaag cccgtcaacg gattggtatc atcaaggaac
      901 accatatcgc tcacgcgccc ggaaaccggc gtcaggttcc agtggacgga gaccagcatg
      961 atcagcatca tgccccacca gaagataggc atagagtaac cggtcagcgc caggccaacg
     1021 gcagtgtgat cgaagataga accgcgcttc actgcggcca gcacgcccac cggaatcccc
     1081 acggcgacgg caaaaatcat ggcgcagacg ccaagttcca gcgtcgcttt aaagcgaggt
     1141 acgaactcgt cccacacggg gattcggctt ttcagcgaga tgcctaaatc gccatgcatc
     1201 accccccaga tataatggag gtactgctgc cacatcggtt tatcaagacc gagttcagcc
     1261 agcagttgag catgacgctc aggggaaata cctcgctcac ccgccatgat catcaccgga
     1321 tcgccgggga tcatgtggac aaaggcaaag gtgagaaggg taataccgat aaacgtcggg
     1381 ataacgagtc ccaaacgtcg gagaatgaac tgcaacataa cccgaattct ctctcatgac
     1441 gcacggcctg gaaccgtgag tctgtattgc tcacaaatct tatcccacgc aaactgcatc
     1501 gcggataaag cattacgccg gatggcgctg cgcttatccg gcctacacaa caccggggcg
     1561 cagcgctctt ttaattattc gacagagacg ttttcgaagt gatgtttgcc taatgggtca
     1621 accacatagc ctttaacttc tttacgtact ggctcataaa ccgtggagtg agcgatgatc
     1681 agcgctggcg cctggtcatg catcacaacc tgggcctgtt tatagagttc aatacgcttg
     1741 ttgtggtcat cggtcgcacg cgcaggctga atcaggtctt caaacggctt gtagcaccat
     1801 tttgaatagt tggagccttg ctgggcggca tcgcagctga acagcgtggc gaagaagtta
     1861 tccggatcgc cattatcgcc ggtccagccc atcatcaccg tctggtgctc gccatcttta
     1921 gcgcgcttga ggtattcgcc ccattcatag gtgacaattt tggcctgaac gccaatcttc
     1981 gcccagtccg cctggatcat ttccgccata cgacgcgcat tcgggttata gggacgctgt
     2041 accggcatcg cccatagatc gatggtgaag cctttttcca gaccggcttc tttcagcagc
     2101 gccttcgctt tttccggatc gtagccgtag tctttaatat cgtcgttgta gccccacatc
     2161 gtcggcggga tcaggttttt cgccgcaacg cctgcgccct gataaacggc tttgatgatg
     2221 gcctctttat tcacggcata ggtcaacgcc tggcgaactt tgacgtcatc cagcggtttt
     2281 ttctgcacgt tataggagag ataacccacg ttcagaccgg cctgctccat caggttgatg
     2341 tttttatctt ctttcatgcg cgcaatatcc gccgggttcg gatacggcat cacctgacat
     2401 tcgttcttct gcagtttggc gtaacgcaca gaggcgtcag gcgtaatgga gaaaaccagg
     2461 cggtcaattt tcggcttcgt gccccagtag ccgtcaaagg ctttgtagag aatgcgggaa
     2521 tctttctgat attgcaccag ttggaatggg ccagtgccga ccggattcag atccactttt
     2581 tccggcgtac cggctttcag catgttgtca gcatattctt tggaaagaat agaggcgaag
     2641 tccatggcta aatcggcaag gaacggcgct tccggacgcg tcagcacaaa ctgcaccgtg
     2701 tgatcgtcta ccttcttcac ttcgctaatc agatccggca gccccatgcc ttcaaagtat
     2761 tcatagctgc cgccagacac tttatggtac gggttctgct cgtttttctg ccggtcaaaa
     2821 gagaacacga catcatcggc gttcagctcg cgcgtgggtt tgaaatcctt gctggattgc
     2881 catttcaccc ctttacgtag gtggaacgta taggttttac cgtcttcgct gatatcccac
     2941 ttctcagcaa gacccgggat cacttccgtg gtgccggttt tgaattcaac cagacggtta
     3001 tagataggta cggagctggc atcataggtg gtgccagacg taaagagctg tgggttaaag
     3061 ccttccggcg agccttctga acaataaacc agggttttgg cctgcacgct tgctgcaacg
     3121 gtcatggcca ccaggctcaa accaagcttc agcatccctg acttcttcaa ggaaatactc
     3181 attcttctgc tccaattgtg atgtatgttg ttttgccctt tgcaaagact tttaccgctc
     3241 ggcctttttt gttttttacc tggtcaggtc agtagtgaga ggtggggatt ccgttcgcat
     3301 aatcgactga gttgcagtgc ggattctcca taaaatgccc ctcattccct acaatctgtc
     3361 aatagaatgt caaaacgtca atacaggtaa ccagctttta caacaacggt gagaattaac
     3421 aaacaaagat taaaaaaagt tcagaagggt attttcagca gggaaatttg tgctacaggc
     3481 agaaaggcag agttattcac ttaatatttt gcaacagtta gtgattaaca attagccatt
     3541 aattgaaaaa tttctttcga tatgttgatt atctgagcga ttaataccac taacgctaaa
     3601 acgcacaggc gaaaatgctg aggttatcca taagccgtgt gcaaagaaga gtgatccgga
     3661 cattgaaaaa caccatcgaa tatgttacaa aattgtaaat aagtaggccg tcgtgcggcc
     3721 taccgcgatc acaaaaacta acttttggcc ctggcctgcg tgcgcttttc gctccagtta
     3781 aacaacgagt tcaccagaat cgccgtcaac gtccccgctg ccatgccgtt gccaaagacc
     3841 atctgtacgc ccgccgggaa attctgatac aggccgggta ccagtatagg tagcattccc
     3901 atggccagcc ccatcgccag cgcgtaggtt ttacccggcg tatgcagtgg ctcacgcgca
     3961 atcatatcaa tgccgataac cccgataatg ctgaagacaa tcaccgccgt accgcacacc
     4021 accgaacctg gcagacaggt cgccagacgt accagcggcg cgaatatggc aatcaggatt
     4081 aacaatcctc cggcagccgc agtcacgaaa cgcgatttca cgttagtggt gcgtatcacc
     4141 ccaatatttt cgccggaggt gataattaag gaggtgccaa aaatcccccc agcagcgaca
     4201 ttaccgcatc accacgaatg gtacgtggaa tcgcctgttg cacattttgc gtggaattga
     4261 ctatttccgc ggtcgcaatc gtttgcccag ttgcttcagc catagagatg accgcgtaaa
     4321 tcagtaaagg cagcgaggcg gagagatcaa aaatcggcca gccgaacggc aaaagctgtg
     4381 ggaaactaaa cagcggcccg tgactaacac cgctaaaatc ggtgctgccc agcgccattc
     4441 ccagcagcgt ccccgctaaa aggccgaaca tcaccgccag ctggcgcaaa ataccgctaa
     4501 acgccagcgc gaaaatcagc gttatcagga tagtccccag cgataaaatg atactggttg
     4561 gatgagcgaa gtcggcgctc cctggctggc caatgatcaa cccgccgtac aggcgaataa
     4621 ggttaatcga caccattagc agcatgatgc caatgataaa ggggggaaaa tggtgcaggc
     4681 agcggcggaa aatcagcaac gcgataaagt agaacagcga ggtcagaatt acggcgccaa
     4741 tcgcggtctg gatattggtc tgtaaagcga tcgcaacgaa aatcgcaatc ggcgcgcccc
     4801 ccggtaccat aataaacggc aaacgcgcgc ccaccccttt cacacccagg ctttgcagaa
     4861 tagcgcccag accgcacatc agaaaggtcg cgctaagtac cgaggcggtc accgtatcgg
     4921 taaagtggag cgctttggcg atcagaaaga cggaggtaat gggggtggcg gcaacgacca
     4981 gcacatgctg aagcgccaaa agtaaggtgg tttgccaggg taatgcatcg ttatccggcg
     5041 tagtaaggcc aggctgcggc atgattaact cccataaaac atcaaaaaaa taaccgccag
     5101 cgcgggctgg cggtctgcat tatttcaacc aactaatggc atcagcggca tagcgatgcg
     5161 cacggaaggc gctgttctgt tttccaggaa taatgccttt actgaggtgc tccggatatt
     5221 cattaaagaa cggaatgata tattcccata ccgtttcgcc ttccggggta acttcaaaca
     5281 ggcggccaaa cgccgattca cagataaagg tgttgccgtt cgccagccgc tgcgcgctcc
     5341 ccatatacgg cgagaaaaac gccggcggga agatatcgcg atactgccag gtaatcgctt
     5401 tgatctgcgg atcgaactcc agcaccgtgg aatgcggcga ggtgacgccg ggacgcaggt
     5461 tgccgttatc gaaaaccaga atcgacccgt tctccatctc aaccggcgtg tgctgctgcg
     5521 ctaccacttc cggccctgca tgccagataa ccttcccgct ctctttatcc acggcaatga
     5581 cgccggaagt ggtacgcagg ctcatcagta ccaggccatc acgggtgacg gacaggccgt
     5641 taatcatcgg ccagtggcgg cggtcgaaaa tatcatgaat cgggaaatct tccggattca
     5701 aatgctccca ggcacgccat tccca
//
LOCUS       DAGWFR010000221         5647 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.224, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000221 DAGWFR010000000
VERSION     DAGWFR010000221.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 5647)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5647)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5647
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.224"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..225)
                     /locus_tag="MOX77_004189"
     CDS             complement(<1..225)
                     /locus_tag="MOX77_004189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggW family oxidoreductase"
                     /protein_id="HCA3359582.1"
                     /translation="MAKLPPLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLL
                     SDLDADVAWAQGREVKTIFIGGGTPSLLSGP"
     gene            complement(218..811)
                     /locus_tag="MOX77_004190"
     CDS             complement(218..811)
                     /locus_tag="MOX77_004190"
                     /EC_number="3.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XTP/dITP diphosphatase"
                     /protein_id="HCA3359583.1"
                     /translation="MQKVVLATGNAGKVRELASLLSDFGLDVVAQTKLGVDSAEETGL
                     TFIENAILKARHAAKMTGLPAIADDSGLAVDVLGGAPGIYSARYSGENATDQQNLEKL
                     LHTLRDVPDDKRQARFHCVLVYLRHAEDPTPIVCHGSWPGVITRQAAGNGGFGYDPIF
                     FVPSEGKTAAELTREEKSAISHRGQALKLLLDALRNG"
     gene            complement(819..1109)
                     /locus_tag="MOX77_004191"
     CDS             complement(819..1109)
                     /locus_tag="MOX77_004191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggU family protein"
                     /protein_id="HCA3359584.1"
                     /translation="MSAVTRCEDGLVLRLYIQPKASRDSIVGLHGDEVKVAITAPPVD
                     GQANSHLTKFLGKQFRVAKSQIVIEKGELGRHKQVKIIHPQQIPPEIAALTE"
     gene            complement(1106..1672)
                     /locus_tag="MOX77_004192"
     CDS             complement(1106..1672)
                     /locus_tag="MOX77_004192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HCA3359585.1"
                     /translation="MNTLTFLLSTVIELYTMVLLLRVWMQWARCDFYNPFSQFVVKIT
                     QPIIGPLRRIIPPMGPIDSASLLVAFILSVIKAIVLFKVITFQAIIWIAAVLILLKTI
                     GLLIFWVLLVMAIMSWVSQGRSPIEYVLIQLAEPLLSPIRRILPAMGGIDFSPMVLVL
                     LLYVVNMGIAEVLQATGNMLLPGLWMAL"
     gene            complement(1691..2395)
                     /locus_tag="MOX77_004193"
     CDS             complement(1691..2395)
                     /locus_tag="MOX77_004193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HCA3359586.1"
                     /translation="MNDIAHNLAHIRDKISAAATRCGRSSEEVTLLAVSKTKPASDIA
                     EAIAAGQRAFGENYVQEGVEKIRHFQEAKVEGLHWHFIGPLQSNKSRLVAEHFDWCHT
                     IDRLRIASRLSEQRPDNLPALNVLIQINISDENSKSGIPLAELDELAAAVATLPRLRL
                     RGLMAIPAPESDYVRQFEVARQMAVAFAGLKARYPDVDTLSLGMSDDMEAAIAAGSTM
                     VRIGTAIFGARDYTKN"
     gene            2413..3393
                     /locus_tag="MOX77_004194"
     CDS             2413..3393
                     /locus_tag="MOX77_004194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus twitching motility protein PilT"
                     /protein_id="HCA3359587.1"
                     /translation="MNMEEIVTLSVKHNVSDLHLCNAWPARWRKQGRMETAPFTAPDV
                     DRLLLDWLNDAQQYQWRTHGQLDFAVSLSGTRRLRASAFTHQQGTSLAIRLLPERCPD
                     LAEIQTPPIVPALLASENGLILVTGATGCGKSTTLAAMVGHLNQHADKHILTLEDPIE
                     YRYTSKRCLIQQREIGQHCATFAAGLRAALREDPDVILLGELRDSETIRLALTAAETG
                     HLVLATLHTRGAAQAVERLVDSFPAQEKEPVRSQLAGSLRAVLSQKLEVDRQDGRVAL
                     FELLINTPATGNLIREGKLHQLAHVIQTGQQQGMMTFAQSAQWRQAQGRL"
     gene            3523..4209
                     /locus_tag="MOX77_004195"
     CDS             3523..4209
                     /locus_tag="MOX77_004195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HCA3359588.1"
                     /translation="MSSQPNQSLIDGIRCLQYLVSSDRAIGCRELARLMDINTTRVNR
                     LLMTMASIGLTMQDEHRRYLPGPGIHALAAQAIRGSALFSHALPILERHAPRDIVVAL
                     GVLWEDQIIYIYHSTPGAQGSQALAGFRMCLAWQSVPGVALLAAESDEALMQRFSPEQ
                     WRNLAPHVAQQRQRGYVLWHHADGEVSMAQPLDKHAAALAFAGMWRIDEAEAAARLQA
                     LKALNQLIAQ"
     gene            complement(4256..4672)
                     /gene="ruvX"
                     /locus_tag="MOX77_004196"
     CDS             complement(4256..4672)
                     /gene="ruvX"
                     /locus_tag="MOX77_004196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HCA3359589.1"
                     /translation="MSDTLLAFDFGTKSIGVAIGQRITGTARPLPAIKAQDGTPDWTL
                     IERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVTVTLHDERLSTVE
                     ARSGLFERGGYRALNKGKVDSASAVIILESYFEQGY"
     gene            complement(4672..5235)
                     /locus_tag="MOX77_004197"
     CDS             complement(4672..5235)
                     /locus_tag="MOX77_004197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005228750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HCA3359590.1"
                     /translation="MNLQHHFLIAMPALQDPIFRRSVVYICEHNQDGAMGIIINKPLE
                     NLQIEGILEKLKITPEPRDSAIRLDKAVMLGGPLAEDRGFILHTPPSRFASSIRISDN
                     TVITTSRDVLETLGTQQQPSDVLVALGYASWDKGQLEQELLDNAWLTAPADLNILFKT
                     PIAERWREAAKLIGIDILTMPGVAGHA"
     gene            complement(5451..>5647)
                     /locus_tag="MOX77_004198"
     CDS             complement(5451..>5647)
                     /locus_tag="MOX77_004198"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462011.1"
                     /note="catalyzes the second step in the glutathione
                     biosynthesis pathway, where it synthesizes ATP +
                     gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate +
                     glutathione; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glutathione synthase"
                     /protein_id="HCA3359591.1"
                     /translation="WEIARRVGPTLKAKGLIFVGLDIIGDRLTEINVTSPTCVREIEA
                     EYPISITGMLMDAIEARLAK"
BASE COUNT         1289 a         1515 c         1577 g         1266 t
ORIGIN      
        1 cggcccggaa agcaggcttg gcgtaccgcc gccaataaaa atggtcttta cttcacgccc
       61 ttgcgcccaa gcgacgtcgg catccagatc gcttaacaga tgctggacgt agtcgtcatg
      121 cggcacctcg cccttcaacg catgggaatt gaagtcgcaa tatggacatt tttgtacaca
      181 ccagggaata tgaatataaa gactgagcgg cggtagttta gccattgcgt aacgcatcca
      241 gcagcagctt gagcgcttgt ccacggtggg aaatcgcgct tttttcttca cgggtcagtt
      301 ctgcggcggt tttgccttca gacggtacga agaaaatggg atcatagcca aatccgccat
      361 ttccggccgc ctggcgagta atgacgccag gccagctacc gtgacagact atcggtgtgg
      421 gatcttcggc atgacgcaaa taaaccagta cacaatggaa tcgcgcctgg cgtttgtcgt
      481 ccggaacatc tcgtagagta tgcagcagtt tttccagatt ttgctgatct gtcgcgtttt
      541 cgccagaata gcgcgcggaa tagatacccg gcgcgccgcc taaaacgtca acggccagac
      601 cggagtcatc ggcaatggcg ggcagaccgg tcattttagc ggcatggcgc gctttgagaa
      661 tcgcgttttc aataaacgtc aggccggttt cttccgcaga gtcaacgccc agtttcgttt
      721 gcgctaccac atcaagccca aaatcgctta acagcgacgc gagctcgcgc actttaccgg
      781 cgttgccggt tgcgagaaca actttttgca tggaatacct actcagttaa cgccgcaatt
      841 tccggcggga tctgttgcgg gtgaataatt tttacctgtt tgtgacggcc cagctcgcct
      901 ttttcgatga cgatctgact tttcgccacg cgaaactgtt taccgagaaa cttggtcaga
      961 tggctgtttg cctgaccgtc aaccggcggg gcggtaatgg cgactttcac ctcgtcgcca
     1021 tgtaaaccca caatactgtc gcggctggct ttcggctgaa tataaagccg taacaccaga
     1081 ccgtcttcgc agcgagtcac agcactcata gcgccatcca cagccccggc agcaacatgt
     1141 tgcctgtcgc ttgtaagact tcagcgatcc ccatattaac gacatacagc agcagcacca
     1201 gaaccatcgg cgagaagtcg atgccgccca tcgcaggcag tatacggcga atcgggctga
     1261 gcagcggctc ggcaagctga atcaatacat attcaatcgg gctacgaccc tggctcaccc
     1321 agctcatgat agccatgacc agcagcaccc agaagatcag caggccgatt gttttaagta
     1381 agataagcac cgcggcaatc cagataatcg cctgaaacgt aattacctta aacagcacta
     1441 tcgccttaat aacgctaaga ataaacgcca ccagcaggga agcgctgtcg atcggcccca
     1501 ttggcgggat aatacgacgc agcggtccga tgatgggctg cgtaattttc accacgaact
     1561 gggaaaaagg gttgtaaaag tcacagcggg cccactgcat ccacacgcgc aataatagca
     1621 ccatggtata cagctcaatt accgttgaga gcaggaaggt caacgtattc atggcgttcc
     1681 tcagttttcc ttaatttttt gtgtaatcac gagcaccaaa gatagcggtg ccgatgcgca
     1741 ccattgtgct acctgccgca atcgcggctt ccatatcgtc gctcataccc agagataagg
     1801 tatcaacgtc agggtagcgc gctttcagcc cggcaaatgc tacagccatt tgacgtgcga
     1861 cttcaaactg ccttacataa tctgactctg gcgccgggat cgccatcagt ccgcgaagcc
     1921 gcagacgcgg cagtgtagcc accgcagcgg ccagctcatc cagttccgcc agcggaatgc
     1981 ctgatttgct gttttcatcg ctgatattaa tttggatcag aacatttagc gccggcagat
     2041 tatccgggcg ctgttcgctc agccgcgagg cgatacgcag gcgatcgatg gtatgacacc
     2101 agtcaaaatg ctcggccacc agccgacttt tgttggactg taaagggcca ataaagtgcc
     2161 agtgcaggcc ttccactttc gcttcctgaa agtggcggat tttttccacc ccctcttgta
     2221 cataattttc accaaatgcc cgttgtccgg cggcaatggc ttctgcgatg tcgctcgcag
     2281 gtttggtttt actcactgca agcaacgtaa cttcttctga agagcggcca caacgcgtcg
     2341 ccgcggcgga gattttgtcc cggatgtgtg ccaggttatg cgcgatatcg ttcattttcc
     2401 gaggatgttt atatgaatat ggaagaaatt gtgacgctta gtgtaaagca taacgtctcg
     2461 gatctacacc tgtgtaacgc ctggcctgcg cgatggcgca aacaaggacg catggagacc
     2521 gcgcctttta ccgcgcctga tgtcgacagg cttctgcttg attggcttaa tgacgcgcaa
     2581 caatatcagt ggcgaacgca cggtcagctt gatttcgccg tctcgctgtc tggcacgcgg
     2641 cgcctgcgcg ccagtgcgtt cacacatcaa cagggaacgt cgctggcgat acggctattg
     2701 cccgagcgtt gtcctgatct ggcggaaatc cagacgccgc cgatagtacc cgcactgctt
     2761 gccagcgaga acggactgat tctggtcact ggcgctactg gctgcgggaa atccactacg
     2821 ctggcggcga tggtgggaca tcttaatcaa catgccgata aacacatcct gacgctggaa
     2881 gatcctattg agtaccgtta caccagcaag cgttgcctga tacagcagcg ggaaatcggc
     2941 cagcattgcg ccacttttgc cgccgggctg cgcgcggcgt tacgtgaaga tcccgatgtc
     3001 attttactgg gagagctgcg tgacagcgag accattcgcc tggcgctgac ggcggcggaa
     3061 acggggcatc tggtactggc aaccctgcat actcgcggcg cggcgcaggc ggtggaaaga
     3121 ttagtggata gttttccggc gcaggaaaaa gaaccggtac gcagtcaact ggcgggtagt
     3181 ctgcgcgccg tactatcgca aaaactggag gtcgacagac aggatgggcg cgtggcgttg
     3241 tttgaattac tgattaatac gccagccaca gggaatttga tccgtgaagg caaactccat
     3301 cagttggccc acgtgataca aaccgggcag cagcagggga tgatgacatt cgcccagagc
     3361 gcgcaatggc gtcaggcgca gggacggctg tagcgaagat ggcggcgtag ggaaggggaa
     3421 gtgttgactg gcgcggtgga ttgaacggca tacaggcttg tatcctggcg aaccggcgtt
     3481 aaaatcgcag ctttgttaaa accacagcga agtcatttaa cgatgtcatc acaaccgaat
     3541 caaagcctga tagatggcat tcgctgtctg caatatctgg tctccagcga ccgtgctatc
     3601 ggatgtcgcg agcttgcccg gctgatggat attaatacca cgcgcgttaa tcgcctgtta
     3661 atgacgatgg cctctattgg actcacgatg caggatgagc accgacgcta tttacccggg
     3721 ccaggcattc atgctttggc ggcgcaggcg attcgcggtt cagcgctgtt ctcccatgcg
     3781 ttgcctatcc ttgagcgaca tgcgcccaga gacatcgtgg tggcattagg cgtgctatgg
     3841 gaagaccaga ttatctatat ttatcactct acgccggggg cgcagggaag tcaggcgctg
     3901 gcggggtttc gcatgtgcct ggcctggcag tcggtacctg gggtggcgtt actggcggca
     3961 gaaagcgatg aggcgctaat gcagcgtttt agtccggagc agtggcgtaa tctggcaccg
     4021 catgtggcgc agcagcgcca gcggggatac gtgctgtggc atcacgctga tggtgaagtt
     4081 tctatggcgc aaccgctaga caagcacgcc gcagcgctgg cctttgcggg aatgtggcgg
     4141 attgatgagg cggaggcggc tgcgcgttta caggcgttga aggcattaaa ccagcttatt
     4201 gcccagtaag cctggcaacc gtgaccgcgt tatccgcctg ctgacaaaaa cggctttaat
     4261 acccctgttc aaaatagctt tcgaggataa tcacggcgga ggccgagtcc actttgcctt
     4321 tattcagcgc gcgataccca cctcgttcaa acagaccgga gcgtgcttca acggtgctga
     4381 gtcgttcatc gtgtagcgtg acagttaccc cgaagcgccc atgaatacgg ttggcgaatt
     4441 tacgggcgcg cgccgtcagc ggttgttcag tgccatccat attgagcggt agcccgacaa
     4501 taatttcgtc cggctgccac tctttcagca aacgttcaat gagcgtccag tcgggcgtgc
     4561 cgtcctgtgc tttgattgcc ggaagcggac gggcggtgcc ggtaatgcgt tgtcctattg
     4621 caacgccgat gctttttgtg ccgaagtcaa aggccagtaa ggtgtcgctc atcaggcgtg
     4681 ccccgcaacg ccaggcatgg tcagaatatc aatgccaata agttttgccg cttcgcgcca
     4741 gcgctcggca atgggcgttt tgaacaaaat attgagatcg gcgggcgcgg taagccaggc
     4801 gttatcaagc aactcttgtt caagctggcc tttatcccag gaggcgtagc ccagcgcgac
     4861 cagcacatcg gaaggctgtt gttgggtacc taacgtttcc agcacatcgc gggaggtggt
     4921 aatcacggta ttgtctgaga tacgaatgct ggaggcgaaa cgtgacggcg gagtatggag
     4981 aataaatccg cgatcttccg ccagcgggcc gccgagcatc acggctttat caagacgaat
     5041 tgccgaatcg cgcggttccg gcgtaatttt tagtttttcc agaatccctt caatttgcag
     5101 attttccaaa ggcttattaa taataatccc catagcgccg tcctggttgt gctcgcaaat
     5161 atacaccacg gaacggcgga aaatcgggtc ctggagcgca ggcatggcaa taagaaagtg
     5221 atgctgtaaa ttcattgtca gaggttctgt ttcctggttc aaaaaaacga cagcgttcag
     5281 tatgtgggga aagcggacgg ttgtcactca tataagccgt cttttgccaa aggacggcgg
     5341 ccttatcggg caatagactg ccggatggcg atgctgacgc gccgccttat ccgaccgggg
     5401 cggcgtgatt gctcaggccc ggtaagcgca cgccaccggg caataaactt ttacttcgcc
     5461 agacgcgctt cgatggcgtc catcaacatc ccggtgatag agatcgggta ttccgcttca
     5521 atttcacgca cgcaggttgg gctggtcacg ttaatttccg ttaagcggtc gccgataata
     5581 tccagaccga caaaaataag ccctttggct ttaagcgttg gtccaacgcg gcgggcgatt
     5641 tcccagt
//
LOCUS       DAGWFR010000222         5574 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.225, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000222 DAGWFR010000000
VERSION     DAGWFR010000222.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 5574)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5574)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5574
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.225"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..474
                     /locus_tag="MOX77_004199"
     CDS             <1..474
                     /locus_tag="MOX77_004199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HCA3359592.1"
                     /translation="KYPSHEVLDKTQYSTWVKVEMPLYQGGGLTARRNAASHAVDAAQ
                     STIQRTRLDVRQKLMEARSQAMSLASALQILRRQQQLSERTRELYQQQYLDLGSRPLL
                     DVLNAEQEVYQARFAELQTESQLHQLQLNYLYNTGALRQAFALNHRSIQSVEIQP"
     gene            471..2627
                     /locus_tag="MOX77_004200"
     CDS             471..2627
                     /locus_tag="MOX77_004200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I secretion system permease/ATPase"
                     /protein_id="HCA3359593.1"
                     /translation="MTRAAPDVEEVLSERALSQWAQAISHVAGHYRVACSPGSIQANA
                     PWFRGKSRTTALTQLARQAGLSFHAPDIDKTAFSQWRLPLVVELRDGQLLVIEHVNGE
                     DAVDVFVIEEEGQRNRLTLSELLPEILYVAALRPLSALKDSRVDRYISRFKPDWMREL
                     VLQDIRPYLPVMVAAFLINVLSLAGIVFSMQVYDRVIPAQSYPTLYVLSFGVLVAVLF
                     GFLLREARTHIMDVLGKRADMRISDRVFGHALRLRNSAIPRSTGSFISQLRELEQIRE
                     MITSSTLATIVDLPFFFLFMIVLAIIAPPLAWIAPVAALLMILPGVALQKKLAVLANQ
                     AAHEATLRNAVLVESVQGLEDIKLMQAENRFLQQWNSYIRITGESGLRTRKLTQRLIS
                     WGMSVQSLVYAAVIMFGAPMVIEGSMTTGAVVAASMLGSRMIAPMANLCGVLARWQQV
                     KAAKMGLDNIMQLPTETQHDDSLIHRDILHGHYLFENAQFRYHNDDQRIPLRLVRLEI
                     MPGERIAILGRNGAGKSTLLQAMAGGLEMIQGDARLDNLSLSHIDMADLRRNIGFLSQ
                     NARLFFGTLRENLTLGAPHANDEQIFDALEVSGGAVFVRRLAKGLDHPIMEGGNGLSG
                     GQRQSLLLARMLLRSPNIVLLDEPSASLDEHTEREFIQRLHQWLGNRTLVVATHRVPI
                     LELVERVVVLKEGQLVMDAPKAQALNADRMQSHRRE"
     gene            2659..3822
                     /locus_tag="MOX77_004201"
     CDS             2659..3822
                     /locus_tag="MOX77_004201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family type I secretion periplasmic adaptor
                     subunit"
                     /protein_id="HCA3359594.1"
                     /translation="MDDFDIQRERAFSGAGRIVLICSLLFLILGIWAWFGRLDEVSTG
                     NGKVIPSSREQVLQSLDGGILAQLTVREGDRVQANQIVAQLDPTRLASNVGESAAKYR
                     ASLASSARLTAEVSDLPLAFPAELNGWPDLIAAETRLYKSRRAQLADTEAELRDALAS
                     VNKELTITQRLEKSGAASHVEVLRLQRQKSDLGLKITDLRSQYYVQAREALSKANAEV
                     DMLSAILKGREDSVTRLTIRSPVRGIVKNIQVTTIGGVIPPNGEMMEIVPVDDRLLIE
                     TRLSPRDIAFIHPGQRALVKITAYDYAIYGGLDGVVETISPDTIQDKVKPEIFYYRVF
                     IRTHQDYLQNKSGRRFSIVPGMIATVDIKTGEKTIVDYLIKPFNRAKEALRER"
     gene            3894..4256
                     /gene="ssrA"
                     /locus_tag="MOX77_004202"
     tmRNA           3894..4256
                     /gene="ssrA"
                     /locus_tag="MOX77_004202"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            complement(4365..5138)
                     /locus_tag="MOX77_004203"
     CDS             complement(4365..5138)
                     /locus_tag="MOX77_004203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001759369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reverse transcriptase"
                     /protein_id="HCA3359595.1"
                     /translation="MTIEVQRWEDKFEIKPGVWVYVPSVEARKVGGKILQAVRNKWIP
                     PLYFYHLRTGGHLKAARLHLKSDFFAVVDIKQFFQSTSRSRITRDLKSYFTYSQAREI
                     STFSTVRNLSHSPHKHVLPFGFVQSPILATLCLDKSYFGSLLRRLNKHHDLKLSVFMD
                     DVIISSNNLAQLQAAYDEALVAMRKSGYQANMSKTQAPSSKISVFNLTLSKGVMKVTS
                     QKMSDFLIDFYSSNYEPHRIGVKNYVEAVNPGQAKLFKL"
     gene            complement(5107..5280)
                     /locus_tag="MOX77_004204"
     CDS             complement(5107..5280)
                     /locus_tag="MOX77_004204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001384722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3359596.1"
                     /translation="MDTNELGLVKARVELITAMLKCATAFVGLVGAVYAVLNMAFNYN
                     NLTHDNRSSKVGR"
BASE COUNT         1342 a         1435 c         1474 g         1323 t
ORIGIN      
        1 aaatatccca gtcatgaagt gctggataaa acccagtatt ccacctgggt gaaagttgag
       61 atgccgcttt atcagggcgg agggctgact gcccgacgca acgccgccag ccatgcggta
      121 gacgcggctc agtcgaccat tcagcgcacc cggcttgatg tccgccagaa actgatggag
      181 gcgcgcagcc aggcaatgag tcttgccagc gcgttacaaa tccttcgtcg gcaacagcag
      241 cttagcgaac gcacgcgcga actgtatcag cagcaatacc ttgacctcgg ttcccgcccg
      301 ttgctcgacg tgcttaatgc ggagcaggag gtttaccagg cgcgttttgc cgaactgcaa
      361 acggaaagcc agttgcatca gttacaactg aactatctgt ataacaccgg cgcgcttcgt
      421 caggcgttcg cgttaaatca tcgcagcatt caatccgtgg agatccagcc atgacccgcg
      481 ccgcccccga tgtagaagag gtactcagtg agcgcgcgct aagccaatgg gcgcaggcca
      541 tcagccatgt cgccggtcat tatcgcgttg cctgttctcc cggttcaatt caggccaacg
      601 ccccgtggtt taggggtaaa agcagaacga ccgccttaac gcagctcgcg cggcaggcgg
      661 gtttatcctt tcatgcgccg gacatagaca aaacggcatt tagtcagtgg cgattgccgt
      721 tggttgtcga gctccgggac gggcagttat tggtcatcga acatgttaat ggcgaagatg
      781 cggtagacgt ttttgtgatt gaagaagagg gtcagcgtaa ccgcctgacg ctcagcgagt
      841 tattgccgga gatcctctat gttgccgcgc tacgcccgct atcggcgctc aaggatagcc
      901 gcgtcgaccg ctatatctcc cgctttaaac ccgactggat gcgcgagctg gttctgcagg
      961 atattcgccc ttatttaccg gtaatggtcg ccgcctttct gattaacgtg ctgtctctgg
     1021 ccgggattgt gttctctatg caggtttacg atcgggtgat ccccgctcag tcatatccta
     1081 ccctgtacgt gctctccttc ggcgtgctgg tagcggtgct gttcggtttt ctgctgcgtg
     1141 aagcgcgtac gcacattatg gacgtgctcg gtaaacgcgc cgatatgcgc atttccgatc
     1201 gggtattcgg tcatgcgtta aggctgcgca acagcgctat cccccgttcc accggcagtt
     1261 ttatctcgca gttacgtgaa ctggagcaga tccgcgagat gattacctct tcaacgctgg
     1321 cgaccattgt cgatctgcct ttctttttcc tgtttatgat agtcttggcg attattgccc
     1381 caccgctggc atggatagcg cccgtggcgg ctctgctgat gatcctgccg ggcgtcgcac
     1441 tgcaaaaaaa actggctgtc ctcgccaacc aggccgccca cgaagcgacg ctacgcaatg
     1501 cggtcttggt cgaaagcgtt caggggctgg aagatattaa actgatgcag gcggagaacc
     1561 gctttcttca gcagtggaat agctatatcc gtattaccgg cgagtcgggt ctacgcaccc
     1621 gcaaactcac gcaaaggctt atcagttggg ggatgtcggt acaaagtctg gtgtatgccg
     1681 cagtgattat gttcggcgcg ccgatggtca ttgaaggcag tatgactacc ggcgccgtgg
     1741 tcgccgcgtc gatgctcggc tcacggatga tcgcgccaat ggctaacctg tgcggcgtgc
     1801 tggcgcgctg gcagcaggtg aaagcggcga agatgggtct cgacaacatt atgcaactgc
     1861 ccactgagac acagcatgac gatagcctga tacaccgcga catcctccac gggcattacc
     1921 tctttgaaaa cgctcagttt cgttaccata acgacgatca acgcataccg ctgcgcctcg
     1981 tgcgtctgga gatcatgcca ggcgagcgga ttgcgatact ggggcgtaac ggtgcgggta
     2041 aatccacact tttacaggcg atggcgggcg gcctggagat gattcaggga gatgcccggc
     2101 ttgataatct cagcttgtcg cacatcgata tggcggattt acgccgcaac atcggctttc
     2161 ttagccagaa cgcgcggctt ttcttcggca ccctacgaga gaacctgacg ctcggcgcgc
     2221 cgcacgccaa cgatgaacag atttttgacg cgctcgaagt cagcggcggc gccgtcttcg
     2281 tcaggcggct ggcaaaaggg ttggatcatc ccattatgga gggtggtaac ggcctgtccg
     2341 gcgggcagcg tcagtccctg ttgctggcga gaatgctgct gcgctccccc aatattgtgc
     2401 tacttgacga acccagcgcc tcgctggacg agcatacgga acgagagttt attcagcggt
     2461 tacatcagtg gcttggcaac cgtaccctgg tcgtcgcaac gcaccgggta ccaatactgg
     2521 agctggttga gcgtgtcgtt gtcctgaaag aaggacaact ggtgatggac gcgccaaaag
     2581 cgcaggcgct taacgcggat cggatgcaaa gtcaccgtcg ggagtagaaa aatgaaaatc
     2641 aatcagcatg atgccgcgat ggacgatttc gatattcagc gtgaacgggc gttttccggc
     2701 gcgggtcgta ttgttctgat ctgctcactg ttatttctca ttctcggcat ctgggcgtgg
     2761 tttggccgac tggatgaggt ttccaccggc aacgggaaag taatccccag ttcacgcgaa
     2821 caggttctgc agtcgctgga tggcggcatt ctggcgcagt tgacggtgcg ggaaggcgac
     2881 agagttcagg ctaaccagat tgtcgcccag cttgatccga cgcgtctggc gtccaatgtt
     2941 ggtgaaagtg cggcaaaata tcgcgcttca ctcgcctcca gcgcacggtt aaccgcggaa
     3001 gtcagcgact tacctctcgc cttccccgct gagctgaacg gctggccgga tctgattgcc
     3061 gcagagacgc gtctctataa aagccgccgc gcgcagctgg ccgataccga agccgagcta
     3121 cgggatgcgc tggcgtcggt taataaagag ctgaccatta cccagcggct ggagaaaagc
     3181 ggcgcggcca gtcatgttga agtgctacgc ctgcaacgac aaaaaagcga tttaggctta
     3241 aaaattaccg atctgcgctc acaatattat gtgcaggcac gcgaagcgtt atcaaaagcg
     3301 aacgctgagg tcgatatgct ctccgccatt ttaaaaggac gcgaggattc cgtcacccgc
     3361 cttaccatac gttcgccggt acgcggcatt gttaaaaata tccaggtcac gacgattggc
     3421 ggcgtgatcc cgcctaacgg tgagatgatg gagatagtgc cggtagacga tcgtctgttg
     3481 attgaaaccc gcctttcgcc gcgtgatatc gcctttattc atcccggcca acgcgcattg
     3541 gttaaaatta ctgcttacga ttacgccatt tacggcgggc ttgacggcgt ggtggagacc
     3601 atttcaccgg ataccattca ggataaagtg aaaccggaaa ttttctacta tcgcgtgttt
     3661 atccgcaccc accaggacta tctacaaaat aaatcaggac gccgtttttc gattgttcca
     3721 ggcatgatcg ccacggtgga tatcaaaacc ggtgaaaaaa ccattgtcga ctatttaatc
     3781 aaaccgttta atcgcgcgaa agaagcgctg cgcgagcggt aaatcgctga agataagaag
     3841 atacgggggc tggtcacgcg tgtcacaagt ctgttatact taccttacac attggggctg
     3901 attctggatt cgacgggatt tgcgaaaccc aaggtgcatg ccgaggggcg gttggcctcg
     3961 taaaaagccg caaaaaaata gtcgcaaacg acgaaaccta cgctttagca gcttaataac
     4021 ctgcttagag ccctctctcc ctagcctccg ctcttaggac ggggatcaag agaggtcaaa
     4081 cccaaaagag atcgcgcgga tgccctgcct ggggttgaag cgttaaaacg aatcaggcta
     4141 gtctggtagt ggcgtgtccg tccgcaggtg ccaggcgaat gtaaagactg actaagcatg
     4201 tagtaccgag gatgtaggaa tttcggacgc gggttcaact cccgccagct ccaccaaata
     4261 aatcaagggg ttacgtgaaa gcgtagccct tttttctttg gtagtggcgg caaaatggcg
     4321 gcaggcattc agtcaagccc agttgctact acatgcgatc gcaattacaa cttaaagagt
     4381 ttcgcttgcc ctggattaac agcttcgacg tagtttttga cccctattct gtgcggctca
     4441 taattgcttg aatagaaatc aatcaggaag tcactcattt tctgagatgt gactttcata
     4501 actcccttac tcaaagttaa attaaacacg ctaatctttg acgatggtgc ctgagtttta
     4561 ctcatgttgg cttgataacc agatttacgc attgccacta gtgcttcgtc gtaagccgct
     4621 tgtaattggg ccaaattgtt tgacgagatg atcacatcat ccataaacac acttagcttg
     4681 agatcatgat gtttgttcaa tcggcgtagt aagctaccaa aataactttt atctaagcag
     4741 agggttgcaa gtattggaga ttgaacaaaa ccaaaaggga ggacatgctt atgtggacta
     4801 tgggacaagt ttcttacagt tgaaaatgtt gagatttccc gcgcttgaga ataggtgaag
     4861 tagctcttta gatcacgggt gatacgacta cggctcgttg actgaaaaaa ttgtttaata
     4921 tcaacaacgg caaaaaaatc actttttaag tgtaatctgg cagctttaag atgcccacca
     4981 gttcttagat ggtaaaaata gagtggcgga atccacttgt ttctgacagc ctgaagtatc
     5041 ttccctccga ctttacgtgc ctcaacgctt gggacataaa cccaaacccc gggcttaatc
     5101 tcaaatttat cttcccacct ttgaacttct attgtcatga gttaaattgt tgtagttgaa
     5161 ggccatgtta agaacggcgt aaaccgcacc aactaagcca acaaacgcgg ttgcgcattt
     5221 gagcatagcg gtgatcagtt caacacgcgc cttaactaag ccaagttcgt ttgtatccat
     5281 aacttgttcc tccatagata cctgacgtct cttagcgcaa gcgcatggcc ctaactaaat
     5341 aaaaaataac aaccagttag cccagaaagc ttaacaagtc ggcgtccgat tacatggcaa
     5401 ccaggtaatc ggtccgcagt cgcaaagcga caaactacat atctacggag tggggataaa
     5461 tccccgctaa cgtcaggcat tgttaattta acctcaactt atagaaaagt atagttttaa
     5521 atcatgtagt tatgtcgcca tttaaatcgg caaacccacc tgtttaaatt tatg
//
LOCUS       DAGWFR010000223         5557 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.226, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000223 DAGWFR010000000
VERSION     DAGWFR010000223.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 5557)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5557)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5557
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.226"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..1272
                     /locus_tag="MOX77_004205"
     CDS             <1..1272
                     /locus_tag="MOX77_004205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter domain-containing protein"
                     /protein_id="HCA3359597.1"
                     /translation="AGQLKVSNASMEGVGINTGFTAGTADTTVSFDNVVEGSNLTDAS
                     AIQSTSVVWNAQGSQDSDGNVDVTMTKNAYADVATDGSVSDVAQALDAGYTNNELYTS
                     LNVGTTAELNSALKQVSGSQATTVFREARVLSNRFNMLADAAPQIKDGLAFNVVAKGD
                     PRAELGNDTQYDMLALRQKLDLTANQNLTLEYGIARLDGDGSQKAGDNGLTGGYSQFF
                     GLKHSMAFDEGLAWNNSLRYDVHNLDSSRSVAYGDVNKIADSDARQQYMEFRSEGAKT
                     FSLMDDALKVTPYAGVKFRHTMEDGYKERNAGDFNLSMNSGSETAVDSIVGMKLDYAG
                     KDGWSATATLEGGPNLSYSKSQRTASLQGAAGQSFGVDDGQKGGGINGLATIGVKYSS
                     NDTALHLDAYQWKEDGISDKGFMLNVKKTFR"
     gene            1466..1636
                     /locus_tag="MOX77_004206"
     CDS             1466..1636
                     /locus_tag="MOX77_004206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhfL family protein"
                     /protein_id="HCA3359598.1"
                     /translation="MFKFVKIAVVAGVLATLTACTGHIENKKNNCSYDYLLHPAISIS
                     KIIGGCGPAADQ"
     gene            complement(1780..2784)
                     /gene="trpS"
                     /locus_tag="MOX77_004207"
     CDS             complement(1780..2784)
                     /gene="trpS"
                     /locus_tag="MOX77_004207"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HCA3359599.1"
                     /translation="MTKPIVFSGAQPSGELTIGNYMGALRQWVNMQDDYHCIYCIVDQ
                     HAITVRQDAQQLRKATLDTLALYLACGIDPEKSTIFVQSHVPEHAQLGWALNCYTYFG
                     ELSRMTQFKDKSARYAENINAGLFDYPVLMAADILLYQTNLVPVGEDQKQHLELSRDI
                     AQRFNGLYGDIFKVPEPFIPKSGARVMSLLEPTKKMSKSDDNRNNVIGLLEDPKSVVK
                     KIKRAVTDSDEPPVVRYDVKEKAGVSNLLDILSAVTGQSIPELEKQFEGKMYGHLKGE
                     VAEAVSGMLSELQERYHRFRNDEAFLQKVMKDGAEKASARAAETLKAVYEAIGFVAKP
                     "
     gene            complement(2777..3535)
                     /gene="gph"
                     /locus_tag="MOX77_004208"
     CDS             complement(2777..3535)
                     /gene="gph"
                     /locus_tag="MOX77_004208"
                     /EC_number="3.1.3.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycolate phosphatase"
                     /protein_id="HCA3359600.1"
                     /translation="MNKLQNIRGVAFDLDGTLVDSAPGLAAAVDMVLYALELPVAGEE
                     RVITWIGNGADVLMERALTWASQERATLRKTMGKPPVDEDIPAEEQVRILRKLFDRYY
                     GEVAEEGTFLFPHVADTLGALHASGLSLGLVTNKPTPFVAPLLESLDIAKYFSVVIGG
                     DDVQNKKPHPEPLLLVASRLGMTPEQMLFVGDSRNDIQAAKAAGCPSVGLTYGYNYGE
                     VIALSEPDVIYDSFNDLLPALGLPHSDNQEIKND"
     gene            complement(3528..4205)
                     /gene="rpe"
                     /locus_tag="MOX77_004209"
     CDS             complement(3528..4205)
                     /gene="rpe"
                     /locus_tag="MOX77_004209"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HCA3359601.1"
                     /translation="MKQYLIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVP
                     NLTIGPMVLKSLRQYGITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRT
                     LQLIKEHGCKAGLVFNPATSLSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLRE
                     VRRRIDASGYDIRLEVDGGVKVNNIGEIAAAGADMFVAGSAIFDKPDYKKVIDEMRSE
                     LAKVSHE"
     gene            complement(4223..5059)
                     /gene="dam"
                     /locus_tag="MOX77_004210"
     CDS             complement(4223..5059)
                     /gene="dam"
                     /locus_tag="MOX77_004210"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine-specific DNA-methyltransferase"
                     /protein_id="HCA3359602.1"
                     /translation="MKKNRAFLKWAGGKYPLLDDIKRHLPKGECLVEPFVGAGSVFLN
                     TDFSRYILADINSDLISLYNIVKLRTDEYVQASRELFMPETNQAEVYYQLREEFNTCQ
                     DPFRRAVLFLYLNRYGYNGLCRYNLRGEFNVPFGRYKRPYFPEAELYHFAEKAQNAFF
                     YCESYADSMARADKSSVVYCDPPYAPLSATANFTAYHTNSFSLTQQAHLAEIAENLVS
                     NRIPVLISNHDTALTREWYQLAKLHVVKVRRSISSNGGTRKKVDELLALYQPGVATPA
                     RK"
     gene            complement(5240..>5557)
                     /locus_tag="MOX77_004211"
     CDS             complement(5240..>5557)
                     /locus_tag="MOX77_004211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HCA3359603.1"
                     /translation="TTPVAGGGKSAGNVGALKSAPSSHYTLQLSSSSNYDNLNGWAKK
                     ENLKNYVVYETTRNGQPWYVLVTGMYASKEDAKRAVSTLPADVQAKNPWAKPLHQVQA
                     DLK"
BASE COUNT         1340 a         1523 c         1397 g         1297 t
ORIGIN      
        1 gcaggccagc ttaaggtcag caacgccagc atggaaggcg tgggtatcaa taccggcttc
       61 accgcaggca ccgccgacac caccgtcagc tttgacaacg tggtggaggg cagcaacctc
      121 accgacgctt ccgctatcca gtccaccagc gtggtgtgga acgcccaggg cagtcaggac
      181 agcgacggca acgttgacgt caccatgacc aaaaacgcct acgccgatgt ggcaaccgac
      241 ggtagcgtgt ctgacgtggc gcaggcgctg gacgctggct acaccaacaa cgagctgtac
      301 accagcctta acgtaggcac caccgccgaa ctcaacagtg cgctgaaaca ggtaagcggc
      361 agccaggcca ctacggtatt ccgtgaagcc cgggtgttaa gcaaccgctt caacatgctg
      421 gccgacgccg cgccgcagat taaagacggc ctggcgttta acgtggtggc gaaaggcgac
      481 ccgcgcgccg agctgggcaa cgacacccag tacgacatgc tggcgctgcg tcagaaactg
      541 gacttaaccg caaaccagaa cctgacgctg gaatacggta tcgcccgtct ggacggcgat
      601 ggttcgcaaa aagcgggcga caacggcctg accggcggct acagccagtt ctttggtctg
      661 aagcacagca tggcgtttga tgaaggtctg gcgtggaata acagcctgcg ttatgacgta
      721 cacaacctcg acagcagccg ttctgtcgcc tatggcgatg ttaacaaaat tgccgattcc
      781 gatgcgcgtc agcagtacat ggagttccgt agcgaggggg cgaaaacctt ctccctgatg
      841 gacgatgcgc tgaaagtgac gccgtatgcc ggggtgaaat tccgtcatac catggaagat
      901 ggctacaaag agcgcaacgc tggcgatttt aacctgtcga tgaactctgg cagcgaaaca
      961 gcggtggatt ccattgtggg tatgaagctg gattacgccg ggaaagacgg ctggagcgcc
     1021 accgctaccc tggaaggcgg cccgaacctg agctacagca agagccagcg tacagcgtca
     1081 ttacagggtg cggcgggtca atcgttcggc gtggatgacg gtcaaaaagg cggcggcatt
     1141 aatggcctgg caaccatcgg cgtgaaatat agcagcaatg ataccgcgct acatctggat
     1201 gcataccagt ggaaggaaga cggtatcagc gataaaggct ttatgcttaa cgttaagaaa
     1261 acatttcgtt aaataaacga cattatataa cactaatata ggccgcttat tattaagcgg
     1321 ccttttttaa atcatattcc ctggtaaaga taaagtcctt atttggacta cctgcattgt
     1381 ttattaattg ctatcgtact atacgctaaa tagatcttat atttattcca ccagtagtat
     1441 tcgttttatc aacaaggatt ttgacatgtt taaatttgta aaaattgccg ttgtggcagg
     1501 ggttctggcg acgcttaccg cctgtactgg tcatatcgaa aacaaaaaaa ataactgcag
     1561 ctacgattat ttgctgcacc ctgcaatttc tatttctaaa attattggcg gttgcggccc
     1621 ggctgccgat caataataga aacgactgcg cagatacaaa aaaaccggga tttcccggtt
     1681 tttttacagg tctgataaac agtatggcac aggtgccttg tccaacttac gttcgttggt
     1741 aggcccgata agctagcgcc atcgggcaag caattaccgt tacggtttcg ccacaaagcc
     1801 aatggcttcg taaacggctt tcagcgtttc ggccgcacgt gcgctggctt tttccgcccc
     1861 gtctttcatc accttctgca agaacgcttc gtcgttgcgg aaacggtgat agcgctcctg
     1921 caactcagac agcattccgg aaaccgcctc cgccacttcg cctttcaaat ggccatacat
     1981 tttaccttca aactgttttt ccagctcagg aatgctctga ccggtcacgg cggaaaggat
     2041 atccagcagg ttagagacac ccgctttctc tttcacatca taacgcacta ccggcggctc
     2101 gtcggagtca gtgaccgctc gtttgatttt cttcactacc gatttcggat cttccaacag
     2161 gccgattacg ttattacggt tatcgtccga tttggacatt ttcttcgtcg gctccagcaa
     2221 cgacatcacg cgcgcaccgg attttggaat aaacggttcc ggtactttga aaatatcgcc
     2281 atacagcccg ttgaaacgct gggcgatatc gcggctcagt tccagatgct gcttctgatc
     2341 ttcgcctacc ggcaccagat tggtttggta cagcaggatg tctgccgcca tcagcaccgg
     2401 gtaatcaaac aggccggcgt taatattttc cgcatagcgc gcagatttat ctttaaactg
     2461 cgtcatacgg ctcagctcgc cgaaataggt atagcagttc agcgcccagc caagctgcgc
     2521 atgttccggc acatgggact gaacgaaaat agtgctcttt tcaggatcaa taccacatgc
     2581 caagtacagc gccagcgtat ccagcgtcgc tttacgtagc tgctgcgcgt cctgacgtac
     2641 ggtaatagca tgttggtcta cgatgcagta gatgcaatga tagtcatcct gcatgtttac
     2701 ccactgacgc aatgccccca tatagttgcc aatggtcaat tcacctgagg gctgtgcgcc
     2761 actaaaaacg atgggcttag tcatttttta tttcctggtt atcgctatgc ggaagcccaa
     2821 gtgcgggcaa aagatcgtta aaactgtcat aaatgacgtc cggctcgcta agggcgatca
     2881 cttcgccata attgtagccg tatgtcaggc caaccgaagg gcagcccgcc gcttttgcgg
     2941 cctgaatatc attacgcgaa tcgccgacaa aaagcatctg ctccggcgtc atgcccagtc
     3001 ggcttgccac cagcaacaac ggctctggat gcggcttctt attttgcaca tcatcgccgc
     3061 cgataaccac gctaaagtat ttggcgatat caagcgattc cagcaacggc gcgacgaacg
     3121 gcgtcggctt attcgtcacc agacctaatg acaatccgct ggcgtgcagc gcgcccagcg
     3181 tgtcggcgac atgcggaaat aaaaaggtgc cctcttccgc cacttcgcca taatacctgt
     3241 cgaacagttt acgcagaatg cgtacctgtt cctcggcagg aatatcttca tcaacgggcg
     3301 gtttccccat agtcttacgc agcgtggcgc gctcttggct agcccaggtc agcgcgcgtt
     3361 ccatcaatac gtctgcgccg ttaccaatcc aggtaatcac gcgctcctcg cccgcgaccg
     3421 gcagttccag cgcatacagc accatatcca ccgccgcggc aagacccggc gcgctatcca
     3481 ccagcgtacc gtcaagatca aaggcgacgc cccgaatatt ctgcaactta ttcatgactt
     3541 acctttgcca gctcactgcg catttcatca atcacttttt tgtagtcggg tttatcgaaa
     3601 attgccgacc ccgcaacaaa catgtccgca ccagctgcgg cgatctcgcc gatattgttc
     3661 accttcacgc cgccgtccac ttccaggcga atgtcgtaac cggacgcatc aatgcggcga
     3721 cgcacttcgc gcagtttatc cagcgtctgc ggaataaaag actggccgcc gaagcctggg
     3781 ttcacggaca tcagcaggat cacatccagt ttgtccatga cgtaatcgag ataactgagc
     3841 gacgttgccg ggttgaatac cagccccgct ttacagccgt gctctttaat cagctgtagc
     3901 gtgcggtcaa catgttcgga ggcttccggg tgaaaggtaa tgatgctcgc gccagcggcg
     3961 gcaaagtcgg gcacgatacg gtcaaccggc ttgaccatca ggtggacatc aataggcgcg
     4021 gtaataccgt actgacgcag ggatttcagc accatcgggc cgatagtcag gttcggcaca
     4081 tagtgattat ccatgacgtc aaagtgtaca acatcagcac cggcagccag cgctttggcg
     4141 gtgtcttcac ccaggcgagc aaaatcagcc gacagaattg agggggcaat caaatactgt
     4201 ttcatccgct tctccttgag aattattttc ttgcaggcgt tgcgactcct ggttggtaca
     4261 gagccagcag ttcgtccacc tttttacgtg tgccgccgtt gctgcttata ctgcgtctaa
     4321 ctttgacgac atgcaatttt gcgagttgat accactcgcg tgtgagcgcc gtatcatggt
     4381 tggaaatgag caccggtatc cggttactga ccagattctc agcgatttcc gccagatgcg
     4441 cttgttgcgt caggctaaaa ctattggtgt gatacgctgt gaagttagcc gtggcggaca
     4501 acggcgcata aggcggatcg caatagacca ccgacgactt gtccgcacgc gccatactgt
     4561 ctgcgtatga ctcacagtaa aagaacgcat tctgcgcttt ttctgcaaag tggtacaact
     4621 ccgcttccgg gaagtaaggt cttttataac gaccaaacgg tacattaaat tccccgcgca
     4681 agttatagcg gcagagtccg ttataaccgt agcggttcag atataaaaac agtaccgccc
     4741 gacgaaaggg gtcctggcag gtgttgaact cctcacggag ttggtaatag acctcagcct
     4801 ggttagtttc aggcataaac agctcgcgcg aagcctgtac atactcgtca gtacgtaact
     4861 tcacgatgtt atagaggcta ataaggtcgc tgttgatatc ggcgaggata taacgagaaa
     4921 agtcggtgtt aagaaacacc gatccggcac ccacaaaagg ttcgacaagg cactcgcctt
     4981 ttggcaaatg tcgtttgata tcatcaagca gagggtattt tccccctgcc cacttcaaaa
     5041 aagcgcgatt ttttttcatg ctgactaact aattacacct tctccggctg tggagaaagc
     5101 tccgacagca tcctgcgctt taggctgtgc cgcgttgctt tacggcgcat ttgacggtag
     5161 caaatgcgcc cctcgcgcct gtcctgaaaa aaaatagctg tcagcgacac tcacaggcaa
     5221 ttgcaggaca cagcctggat tatttcagat cggcctgaac ctgatgcaac ggttttgccc
     5281 acgggttttt cgcctgcaca tcggcaggta aggtggacac cgcacgttta gcatcttctt
     5341 tcgaagcata catccccgtt accagcacat accacggttg tccattacgc gtcgtctcgt
     5401 ataccacata atttttcagg ttctctttct tcgcccaacc gttcaggttg tcgtaatttg
     5461 aagaactact gagctgcaat gtgtagtggc tggatggcgc gctctttaat gcgccaacgt
     5521 tgccggcgct tttcccgccg cctgcgacag gcgtcgt
//
LOCUS       DAGWFR010000224         5554 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.227, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000224 DAGWFR010000000
VERSION     DAGWFR010000224.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 5554)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5554)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5554
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.227"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..291
                     /locus_tag="MOX77_004212"
     CDS             <1..291
                     /locus_tag="MOX77_004212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HCA3359604.1"
                     /translation="VENFNRPNAVARFARIAQAMGVETRGMSDEVASQEAINAIRTLS
                     KRVGIPEGFSKLGVTKEDIEGWLDKALADPCAPCNPRTASRDEVRELYLEAL"
     gene            288..602
                     /gene="rhaM"
                     /locus_tag="MOX77_004213"
     CDS             288..602
                     /gene="rhaM"
                     /locus_tag="MOX77_004213"
                     /EC_number="5.1.3.32"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-rhamnose mutarotase"
                     /protein_id="HCA3359605.1"
                     /translation="MIRKAFVMQVNADAHEEYQRRHNPIWPELEAVLKSHGAHHYAIY
                     LDQERNLLFATVEIESEERWNAVASTDVCQRWWKHMRDVMPANPDNSPVSAELKEVFY
                     LQ"
     gene            complement(691..1239)
                     /locus_tag="MOX77_004214"
     CDS             complement(691..1239)
                     /locus_tag="MOX77_004214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004855902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HCA3359606.1"
                     /translation="MTQPISVIARSLVRERQQTGLSLAEIARRAGIAKSTLSQLEAGN
                     GNPSLETLWSLCVALDIPFARLLEPQVQKTQVIRRGEGTKVVAEQAHYQAILLAACPP
                     GARRDIYLLLTQPGADRISHPHPPGSVEHIIVTQGKALVGLTEAPEELAEGDYICYPG
                     DQAHIFKALEPDTQAILVAEQN"
     gene            1340..1999
                     /locus_tag="MOX77_004215"
     CDS             1340..1999
                     /locus_tag="MOX77_004215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlC family ABC transporter permease"
                     /protein_id="HCA3359607.1"
                     /translation="MKHYFSCLKGDTIKAIFLVCLAVGVVGMSYGSLAMAYGFPLWVP
                     FVLSIFVLAGASEFMFIGIVASGGNPLAAAAAGLLVNARHVPFGVTVRDLVGTRAASF
                     FGCHIMNDESVVFGLSQKTPEQRKAAYWLCGLGVALFWPIGTLIGAGVGKLLPAPETI
                     GLDAVFPAILLALVIPAFKNRTTLIRGCSGAALSLAAVPFVAAGLPVLLSLLGLLARK
                     K"
     gene            1999..2322
                     /locus_tag="MOX77_004216"
                     /pseudo
     CDS             1999..2322
                     /locus_tag="MOX77_004216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462921.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AzlD domain-containing protein"
     gene            complement(2665..3765)
                     /locus_tag="MOX77_004217"
     CDS             complement(2665..3765)
                     /locus_tag="MOX77_004217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462920.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3829 domain-containing protein"
                     /protein_id="HCA3359608.1"
                     /translation="MKRNLLSSAIIIALMTLGATGCDDNNVKTEATPAASSQPATPAP
                     SQTPETQSGESPAQPPAAKPETATQPPAAKPETPAQPEVDAEEVYSEKMDVYIDCFNK
                     LQLPVQHSLARYADWVKDFKKGPTGKESLVYGIYGITESYITNCQKEMKQVAALTPLL
                     EPIDGVAVSYIDSAAALGNTINEMEKYYTQENYKDDGFAKGKALHQTLLKNIEDFKPI
                     SEKYHEAIQEINDKRQLTQLKKIEEAEGKTFNYYSLAVMISAKQINKVISADTFDAEA
                     MMKKVAELETMIAQLKEVNTDGRNSSFISSAADYQLQAKKYIRRIRDNVEYSDFEKKR
                     VQDPATGWMVADSYPASLRSYNEMVDDYNRLR"
     gene            3947..4978
                     /locus_tag="MOX77_004218"
     CDS             3947..4978
                     /locus_tag="MOX77_004218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YiiG family protein"
                     /protein_id="HCA3359609.1"
                     /translation="MKKDLLSSIIIAMLMTAGLSACDEKKADEQPVAQSADSSASNTQ
                     STSAESADANDVLNQKLNVYIDCYNNLQADIYRAVNRYANTFDDFRTGPTGKEDDPSP
                     LVPVYPAFIQDCRKDIKAAAELKPAFASLDSAALAFINAAGPLAETINSMNKYYDQDN
                     FKDDAFAGAKAFHKTFIKQFDEFDPIAKKYIAEITIMSKQHAANEIKATEKKEGKSIK
                     YYTLLTMQEAETLNDAVADASFDVAAVSKQLADFEEHTQKLNEKINVDIDKHRSFPGF
                     ISELEKFQGKVKKRIRRVRDNVAYTSHEQDYLNSGSGDMVDGSYKAVVKAYNELIDTY
                     NGYHLEREF"
     gene            complement(5254..>5554)
                     /gene="fdhD"
                     /locus_tag="MOX77_004219"
     CDS             complement(5254..>5554)
                     /gene="fdhD"
                     /locus_tag="MOX77_004219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HCA3359610.1"
                     /translation="GELAGGHEDVGRHVALDKLLGRRATEGEEWRQGAALVSSRASYE
                     MVQKSAMCGVEILFAVSAATTLAVDVAERCNLTLVGFCKPGRATIYTHPQRLIAD"
BASE COUNT         1323 a         1384 c         1367 g         1480 t
ORIGIN      
        1 gtcgagaact ttaaccgtcc gaacgccgtc gcgcgttttg cccgcatcgc acaggcgatg
       61 ggcgtggaga cgcgcggtat gtctgacgaa gtcgcaagtc aggaagcgat taacgctatc
      121 cgtacgctga gcaaacgcgt cggcattcca gaaggtttca gcaagctggg cgtcacaaaa
      181 gaagatatcg aaggctggct ggataaagcc ctcgccgacc cgtgcgcgcc gtgtaacccg
      241 cgcaccgcca gccgcgatga agttcgcgag ctgtacctgg aggcgttatg atccgcaaag
      301 cctttgtgat gcaggtaaat gccgacgcgc acgaggagta tcagcgtcgt cataacccaa
      361 tctggccgga gctggaagcc gtattaaaat ctcacggcgc gcatcactac gcgatttatc
      421 tcgatcagga gcgcaatctg ctgttcgcca ccgttgagat tgaatccgag gagcgctgga
      481 acgccgttgc cagcaccgac gtttgccagc gttggtggaa acatatgcgt gacgttatgc
      541 ccgcgaatcc ggataacagc ccggtcagcg cagagctaaa agaggtgttc tatctgcagt
      601 aagtcgtgtg cccgatggcg caagcttacc gggcctacgg ttttattttt tgtcggccgg
      661 ataaggcggt tacgccgcca tccggcaatt tcaattctgc tccgctacca ggatagcctg
      721 agtatccggt tccagcgctt taaagatatg cgcctggtcg ccgggataac aaatgtaatc
      781 gccctccgcc agctcttccg gcgcctcggt taagccgacg agggcttttc cctgcgtaac
      841 aataatatgt tccaccgacc ccggcggatg cggatgagag atccggtcgg cccccggctg
      901 cgtcaacagc agatagatat cacgccgcgc gccgggcgga cacgccgcca gtaatatcgc
      961 ctgataatgc gcctgctccg ccacgacttt ggtgccttct ccgcggcgaa tcacctgcgt
     1021 tttttgtacc tgcggctcca gcagcctggc aaagggaatg tcgagcgcga cgcatagcga
     1081 ccatagcgtc tccaggctgg ggttgccgtt ccctgcttcc agttgtgaaa gcgtagattt
     1141 agcgatgcct gcgcgccgcg caatctccgc cagcgacagt ccggtttgct ggcgttcgcg
     1201 taccaggctt ctggcaatga cgctaatagg ttgtgtcata aagcatccaa cgttcactat
     1261 aacgaacgaa atgttcgtct tgtaaagcaa atctgttccg ttcattataa tgaaaattcg
     1321 ttcgatatga ctaaagaaga tgaaacacta tttttcctgt ctcaagggag acacgataaa
     1381 agcgatattt ttagtgtgcc tggccgtggg cgtcgtcggc atgtcctatg gctcactggc
     1441 gatggcctac ggtttcccac tgtgggtgcc gtttgtcctc tctatttttg tgctggcggg
     1501 cgcgtccgaa tttatgttta tcggcattgt tgccagcggc ggcaatccgt tagcggcggc
     1561 ggcggcagga ctactggtga atgcgcgcca cgtgccgttt ggcgtaacgg tgcgcgattt
     1621 ggttggcacc cgcgccgcca gctttttcgg ctgccatatc atgaatgatg agagcgtggt
     1681 gttcggcctg tcgcaaaaaa cacccgaaca acgtaaagcc gcctactggc tatgcggtct
     1741 gggcgtcgcc ctattctggc cgattggcac actgattggc gcaggtgtcg gcaaactgct
     1801 cccggcccca gaaaccatcg gtctggacgc cgtattcccg gcaatcttac tggcgctggt
     1861 gatcccggcg tttaaaaacc gcaccacatt gattcgtggt tgcagcggcg ccgcgctgtc
     1921 gcttgccgcc gttccctttg tggctgccgg attgccggtg ttgctttcgc tgcttggcct
     1981 actggcgagg aaaaaataat gggcaatatg acgctattta ttatcggtat tgctctttta
     2041 tctacgggaa cctatttgat gcgcctcggc ggcgcgaaac ttggcagccg tctggcgctg
     2101 tctgagcgtt cacaggcgct gctctcggat gcggcaacgg tgctgctatt ctccgtcgcg
     2161 ctggcgacca ccttttacga aggcgaacat tttgccggaa tggcgcgcgt tcttggggtt
     2221 ggcttcgccg tatttttagc ctgacgtaaa atgccgctta ttgtggtgat tatcgccgct
     2281 gcagtggtga ccgcgttatt acgaatggcg ggtattaatt aacgtcttac agaacagttg
     2341 gacgtgacac cctataagtg atgaaggctg ggccgcccta tgctgaagtg gctcagaatt
     2401 ttcgcatcag ggggataaat gttttccata tgaatgccga ttcttaatta cactatcaga
     2461 gtaacttcaa catcttgtga tagcttcaga ttactggttt tcctaatagc tctccttagt
     2521 taaggtttac gtcagctatt tttacggata ttgcctgacg aaatgcatga acgaaaaaag
     2581 cgcctgatcg gcgctcttta ttggtgttat agcgtaactt tataggcgct tacgccagcc
     2641 tgcacgcagt taatgtgccg tcactcaacg caggcggtta taatcatcca ccatctcgtt
     2701 ataacttctc aacgacgccg gataagaatc cgcaaccatc catcctgttg cagggtcctg
     2761 cacccgtttc ttttcaaaat cagaatactc aacattgtct ctgatgcgac gaatatattt
     2821 tttagcttgt agctgataat cagccgcaga gctgatgaaa gaagaattac ggccatcagt
     2881 attcacttct ttcaattgcg caatcattgt ttccagttcc gcgacttttt tcatcatcgc
     2941 ttcggcatca aaggtatcgg cagaaataac cttgttgatc tgctttgccg aaatcatgac
     3001 agccagagaa taatagttaa atgttttacc ttccgcttct tctattttct tcaactgtgt
     3061 caattgccgc ttgtcattta tttcctgaat agcctcatga tatttttccg agataggttt
     3121 aaaatcctcg atattcttca gtaatgtctg atgcagcgcc ttacctttag caaaaccatc
     3181 atctttatag ttttcctggg tataatattt ttccatttcg ttaatggtat tacccagcgc
     3241 ggcggcgcta tcaatatagc taacggcaac gccatcaata ggctcaagca atggcgttaa
     3301 ggcggccacc tgtttcatct ctttctggca attcgttatg taagactccg taataccata
     3361 aatgccataa accaggctct ctttccctgt cggacctttt ttaaagtctt tcacccaatc
     3421 cgcgtaacgc gccagactgt gctgaacggg caattgaagt ttattaaaac aatcgatata
     3481 gacatccatt ttttcactat aaacttcttc agcgtcaacc tccggctgag ctggcgtttc
     3541 tggcttcgcc gccgggggct gagttgctgt ttctggcttc gctgctgggg gctgcgctgg
     3601 actttcgcca gattgcgttt ccggcgtctg agaaggcgct ggcgtcgcag gctgactgct
     3661 ggcggccggc gtcgcctcgg ttttaacatt attgtcatca catcctgttg cgcccagggt
     3721 cattagcgca atgattatcg ctgaggataa taaattcctt ttcatttaat tgccttttgt
     3781 atatttacgt tggggttctc ttattttaac gaacacattg atattgataa tgttaattat
     3841 aatgaaatat ggattaagta ttttttgtgt tgaataaatc acatacctgt ttttttcatt
     3901 aaaatgaatc tgtaaatttc aatgatatta tttataggtt attctaatga aaaaggattt
     3961 gttatcatca attattatcg ctatgctgat gactgccggg ctaagcgctt gtgatgaaaa
     4021 aaaagcggac gaacaacctg tagctcagag tgcggattca tcagcgagca atacacaatc
     4081 cacatcagcg gaaagcgcag atgcgaacga tgttcttaac caaaagctga atgtttacat
     4141 tgattgttat aataatctcc aggcagatat ttaccgtgct gtaaatcgtt atgctaacac
     4201 attcgacgat ttccgcaccg gtcctaccgg taaggaagac gatccctctc cgctggttcc
     4261 tgtgtatcct gcatttatcc aggactgccg gaaagacatc aaggcggcgg ctgaattaaa
     4321 gccggcgttt gcctctctgg atagtgctgc tctggcattt attaatgcgg ctgggccact
     4381 agctgaaaca atcaatagta tgaataaata ctatgatcaa gataacttca aggatgatgc
     4441 ctttgctggc gctaaagcgt tccataaaac gtttataaaa cagttcgatg agtttgatcc
     4501 cattgcgaaa aaatatatcg ccgagattac cattatgagt aagcagcatg cggctaatga
     4561 aattaaggcg accgagaaga aagaaggtaa atccattaag tactatacgc ttttgacgat
     4621 gcaggaagcc gagacgctta atgacgctgt agctgatgct tcttttgatg tggcggcagt
     4681 aagcaaacag ctcgctgatt ttgaagagca tactcagaag ctaaacgaga agatcaacgt
     4741 tgatatagat aaacatcgta gcttccctgg ttttatttct gagctggaaa aattccaggg
     4801 caaggtgaaa aaacgcattc ggcgcgtgcg cgataacgtg gcgtatacct cgcatgagca
     4861 ggactacctc aatagcggca gcggcgatat ggtagatggt tcttataagg ctgtggttaa
     4921 agcttataac gagctcatcg acacctataa tggctatcat cttgagcgtg agttctaagc
     4981 ttttcacgct gcaaatcgcg tgcatatgac cgctgaactg agcaaataag tcgttaccga
     5041 ctgtcgaaag agcgccccag gggcgctttt ttcgttcgaa gtattaccgg gtagcaagcg
     5101 cctcgttaat gactggaata agctgcggtc cagcttaaaa acgattaaaa cctgtatggc
     5161 ctcgccacta tacgtgtata cgtgattccg ttatcaagag aggctgtaaa attgagaaaa
     5221 tatatatttt acgaaaatgt agagggtact attttagtct gcgattaacc gctgcggatg
     5281 ggtataaatc gtcgcccgac ccggcttaca gaaccccacc agcgtaagat tacaccgttc
     5341 agcgacgtca accgcgagcg tggtagcagc agaaaccgca aacaaaattt ccacaccgca
     5401 catcgccgac ttctgcacca tttcgtaact cgcacgactg gaaaccagcg ccgcgccttg
     5461 ccgccattcc tcaccttccg tagcgcggcg gccgagcagt ttatccagcg caacgtggcg
     5521 tccgacatct tcatggcccc ccgccagttc accc
//
LOCUS       DAGWFR010000225         5504 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.228, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000225 DAGWFR010000000
VERSION     DAGWFR010000225.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 5504)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5504)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5504
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.228"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(141..571)
                     /locus_tag="MOX77_004220"
                     /pseudo
     CDS             complement(141..571)
                     /locus_tag="MOX77_004220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000401539.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(805..1929)
                     /locus_tag="MOX77_004221"
     CDS             complement(805..1929)
                     /locus_tag="MOX77_004221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytoplasmic protein"
                     /protein_id="HCA3359611.1"
                     /translation="MPPLFTINACKSAGCRNLGLPDSPDYVWPDYRLGYPALHCRACG
                     SYPPLFNEGEFRRWASAYIAQYAKEHGHFCPDCYQRTWIRYGRNPGGTQRLQCQYCKK
                     VWTPKQHALNVAETPEQICSIPLLVPFQGANAFQQLYFLFSFDAVRGNILHLSSNFTL
                     LSAGKSLHYHWKGIAPPEGEKGDIIHRIAIKERQFLQRSQFDEIQYGPAALKRNAQGT
                     ILRPVITAHGHFRVLKNRFPDVATHIIAHECFLRGAVITAWAERFRQRLSSLWFVEEE
                     INDDDCRAEWQLLGKTWQGWWQNQWQLWGQGHNRKMVCSLTGSHLEQGVAVNLAASRR
                     FVTWLWQQPEFQQSAHCSAKRVTQILYLLTEKYNSQWNHI"
     gene            2065..3621
                     /locus_tag="MOX77_004222"
     CDS             2065..3621
                     /locus_tag="MOX77_004222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional metallophosphatase/5'-nucleotidase"
                     /protein_id="HCA3359612.1"
                     /translation="MKVKLLAAGILFTLPFWACAKDVTIIYTNDLHAHVEPYKVPWIA
                     DGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGPYISSLTKGKAIIDILNTMQY
                     DAATIGNHEFDHGWDNTLLQLSRAKFPIVQGNIFYEDSSKSFWDKPYTIVEKDGVKIG
                     VIGLHGVFAFNDTVSAATRVGIEARDEIKWLQRYIDELKGKVDLTVALIHEGTPARQS
                     SMGNTDVRRALDKDIQTASQVKGLDILITGHAHVGTPEPIKVGNTLILSTDSGGIDVG
                     KLVLDYQEKPHQFTVKNFELKTIFADEWKPDPQTKQVIDGWNKKLDKVVQQTVAQSPV
                     ELTRAYGESSSLGNLAADALLFTAGKDTQLALTNSGGIRNEIPAGAVTMGAVISTFPF
                     PNELVTMDLTGKQLRSLMEHGAGLSNGVLQVSKGLEMKYDSSKPIGQRVTVLTLNGKP
                     IDDAAVYHIATNSFLADGGDGFAAFTEGQARNTSGGYYVSNAIVDYFKAGNTITDEQL
                     KGMRVADVKK"
     gene            3886..5124
                     /locus_tag="MOX77_004223"
     CDS             3886..5124
                     /locus_tag="MOX77_004223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014341216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HCA3359613.1"
                     /translation="MINNDPLFDLLNKEQQRQQHSLELIASENFASPAVLAAQGSVLT
                     NKYAEGYYQHRYYGGCKFIDEVEMLAITRAQQLFGARYVNVQPHSGSQANQAVYLALL
                     KPGDKILGMSLQCGGHLTHGSPVNQSGKWFNAFHYGVDAHSGLIDMDEVETIAKRERP
                     RLIIAGGSAYPRHYDFARFRRIADAVGAMLLVDMAHFAGLVAGGCFPSPLAYADVITA
                     TTHKTLRGPRGGMILTNDARLAKKIDSAIFPGLQGGPLMHVIAAKAVALGEALQPEFK
                     RYAGQVIENAQAMCQQLAQRGLTLLTGGTDCHLGIIDLRPQGLTGAQVEYFLELAGIT
                     VNKNTLLGDPQPPSITSGIRIGSAACATRGMKADDFTLIADWISEIIFAIKTPNIADI
                     CADIRQKVTKLTTNYPLPYQ"
     gene            5121..>5504
                     /locus_tag="MOX77_004224"
     CDS             5121..>5504
                     /locus_tag="MOX77_004224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000976816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase 3"
                     /protein_id="HCA3359614.1"
                     /translation="MMKLAEIQAACGVLCVDLAAVVDNYQTLARHVAPAQCGAVLKAN
                     GYGLGAEAIAPALYAANCRIFFVAQLSEGVALRNILSADAMVVLLNGVMPQAMPFCCA
                     QQITPLLNSVDQVMTWLALQEARSQR"
BASE COUNT         1318 a         1370 c         1514 g         1302 t
ORIGIN      
        1 cgtgggccgg gcgcgggtcg cgatgtgacc gccggggcga ttcagtcgga tatcaaccgc
       61 ctggcgcagc tattgtaata cgcccgcctg ccggatagcg gcttcgccag atccggcagc
      121 gggcaaaccg gggtatctgt ttattcttcg tcagatgcgt tttctgcatt ggcgacgata
      181 aatcggttca tcttcgcctg gataatggct atgccgacag gggggaacag caatgcccaa
      241 aatagcgtcc agccgctctg tatacctgta ttttcgtttg cattcgcccg caatgtttgg
      301 atttcgtcgc taagcgtcag acacaatatt gctgtgctat gataagcctg actacgtcag
      361 atgggccatt tacgccaacg agaataagac caatacgatc ggctggaata gacagtgatt
      421 tactccaaaa ataaacacca tacgacgatc ccagcgaact gataaaagag agcgccaaaa
      481 agaaaaaagt gatcccccag aatcggtagc tactcaggag atcggcgcag gtccattttt
      541 tatctgacat tgacggtaaa gtaatttcca tatttatccc ttgttttcca tagaaaataa
      601 gaatgtatag agctattcaa attgataata aatattgatt atgtgaataa cgtttatagc
      661 cgatcttaac gcaaaacgaa gggccattta tcaaatagct ctattctttt tcagcgtgta
      721 aaagcaggat gtgaggtgat taaatctata gcgccttctg aatgataatc tgtgattttt
      781 tatgcgtggc attacatcat tgagttaaat gtgattccat tgtgagttat atttttccgt
      841 cagcaaatac agaatttgtg tgacgcgttt ggcggaacag tgggcgcttt gctggaattc
      901 aggttgttgc catagccagg taacaaagcg gcgactggcc gccagattaa cggcgacacc
      961 ttgttctaag tgggaaccgg ttaacgaaca gaccattttg cggttgtgac cttgccccca
     1021 gagttgccac tgattttgcc accatccctg ccatgttttg cctaacagtt gccactctgc
     1081 gcggcaatcg tcatcgttta tctcttcctc aacgaaccac agcgaggaga gacgctggcg
     1141 aaaccgctcc gcccatgccg taatgaccgc gccgcgcaaa aaacactcat gggcaatgat
     1201 gtgtgtcgcg acatcaggaa agcggttttt cagcacccga aaatgaccat gcgccgtaat
     1261 caccgggcga agtattgttc cttgcgcgtt acgtttaagc gccgccgggc catactgaat
     1321 ctcatcgaac tggctgcgct gtaaaaattg ccgttcttta atggcgatac ggtgaataat
     1381 atcgcccttc tcgccctcgg gcggcgcaat tcctttccag tggtaatgca aactctttcc
     1441 ggcagaaagt aacgtgaaat tgctggaaag gtgaagtata ttgccgcgaa cagcatcaaa
     1501 actgaataaa aagtacaatt gttggaaggc attcgctccc tgaaacggta cgagcagcgg
     1561 aatactgcaa atctgttccg gcgtttcggc gacattcagc gcgtgctgtt ttggcgtcca
     1621 gaccttctta cagtactggc actgaagtcg ctgcgttccg ccgggattac gtccataacg
     1681 aatccatgtt ctttgatagc aatcggggca aaagtgacca tgctctttgg catattgcgc
     1741 gatgtaagca gacgcccagc ggcgaaattc cccctcgttg aagagcggtg gataactgcc
     1801 gcaggcccga caatgcaatg ccggataacc caggcgatag tccggccaca cataatccgg
     1861 cgagtcaggc agcccaagat tgcgacaacc agcgcttttg caggcattaa tggtgaacag
     1921 aggcggcata cattttacca acgattttgg caggtcgttg attctgcctt cataaaacgg
     1981 tacgcgggtg tgaggactct cacataaaaa aacctttcag aacgtaacgt agcgaatctt
     2041 tatatgactg aaagggactt atttatgaaa gtaaaactgc ttgctgccgg tattttgttc
     2101 acgctgccgt tctgggcctg cgccaaagat gtcaccatta tttacaccaa cgatctacac
     2161 gcccatgtgg agccttataa agtaccgtgg attgctgacg gtaaacgcga tattggcggt
     2221 tgggccaata tcactacgct ggtgaagcag gaaaaagcca aaaataaggc gacgtggttt
     2281 tttgatgccg gagattactt taccggaccg tatatcagca gcctgacgaa gggtaaagcg
     2341 attatcgata ttttgaatac catgcagtat gacgctgcca ctatcggtaa tcatgagttc
     2401 gatcatggct gggacaatac attgttgcaa ctgagccggg cgaaattccc tatcgtacag
     2461 ggcaatattt tttatgagga cagcagtaaa tccttctggg ataagccgta caccattgtt
     2521 gaaaaagatg gcgtcaagat tggcgtaatc ggcttacacg gtgtctttgc ttttaatgat
     2581 acggtttctg ccgcgacgcg cgtgggcatt gaggctcgcg atgaaattaa gtggctgcaa
     2641 cgttacattg atgaacttaa aggtaaagtc gatctgaccg tcgcgctgat ccacgaaggc
     2701 accccggccc gccagtccag catggggaat accgatgtgc gacgcgcgct ggataaagat
     2761 attcagaccg caagtcaggt aaaagggctg gatattttga ttaccggcca cgcgcatgtc
     2821 ggtacgccgg aaccgattaa agtcggtaat acgctgatcc tctcaacgga cagcggcggt
     2881 attgatgtcg gcaaactggt gctggactac caggaaaagc cgcatcagtt taccgtgaag
     2941 aacttcgagc tgaagaccat ttttgctgat gagtggaagc ccgatccgca aacgaaacag
     3001 gtgatcgacg gctggaacaa aaagctcgat aaagtcgtgc agcaaacggt ggcgcagtcg
     3061 ccggttgagc tgacccgcgc gtatggcgaa tcgtcgtcgc tggggaatct ggcggcggat
     3121 gcgctgcttt ttacggcggg gaaagacacc cagttagcgc ttactaactc tggcggtatc
     3181 cgcaacgaaa tcccggctgg tgcggtgacg atgggggcgg taatcagtac cttcccgttc
     3241 cctaatgaac tggtcacgat ggatttaacc ggtaaacaat tgcgcagcct gatggagcat
     3301 ggcgccggat taagcaacgg cgtgttgcag gtgtctaaag ggctggagat gaagtatgac
     3361 agcagcaaac ctatcggcca gcgggttacc gtgctgacgc tcaatggcaa gccgattgat
     3421 gatgcggcgg tttatcacat cgctaccaac agcttccttg ccgacggcgg cgatggtttt
     3481 gcggcgttca cggaaggcca ggcacggaac acctccggcg gctactatgt gtcgaatgcg
     3541 atagttgatt actttaaggc gggcaacacc atcacggatg agcagctcaa aggaatgcgt
     3601 gttgcggatg tgaagaagta aggggttact tgcctgtgcg caatggcctt tagcgcattc
     3661 aggccggacg gcggtatgtc tggcctggat cattcgtgga ccgcggatat caaccgtctg
     3721 gcgtagcttc tgtaattttg ccgggttacg cgccgcgttc ccggcatgtt cctgccgaaa
     3781 tttacccctc tatccggtgg tctgcgtcct gcgtaaaaag tggcggggtg cgggggaaac
     3841 tttccctgcg aaaatcatca tatgatgaat tttcggggga accgcatgat aaacaacgat
     3901 ccgctttttg atttacttaa taaagagcaa cagcgccagc agcactcgct ggaactgatt
     3961 gcctcggaga atttcgccag ccctgccgtt cttgcggcac aagggtcggt gttaaccaat
     4021 aaatacgccg aaggctatta ccagcaccgc tactacggcg gctgtaagtt cattgatgag
     4081 gttgagatgc tggcgataac ccgcgcgcag caacttttcg gcgcgcgtta tgttaacgtg
     4141 cagcctcact ccggcagcca ggcgaatcag gcggtatatc tggcgctgct gaaacccggc
     4201 gacaaaattc tgggcatgag cctgcaatgc ggcggccatc tcactcacgg ctcgccggtc
     4261 aatcaatccg gcaaatggtt taacgccttt cactatggcg tcgatgcgca tagcggtctt
     4321 attgatatgg atgaggttga gacgatcgcg aagcgtgagc gcccgcggct gattatcgcc
     4381 gggggatcgg cctacccacg acactatgat tttgcccgct ttcgccgcat tgccgatgcc
     4441 gtcggcgcga tgctgctggt ggatatggcg cattttgccg ggctggtggc gggcggctgt
     4501 ttcccctcgc cgctggcgta tgccgatgtg attaccgcca ccacgcataa aacgttgcgc
     4561 gggccgcgtg gcggcatgat tctgaccaac gacgcccggc tggcgaaaaa aatcgacagc
     4621 gccatctttc ccggcttgca gggcgggccg ttgatgcacg ttatcgcggc taaagcggtg
     4681 gcgcttggcg aagcgctaca gcctgaattt aaacgttacg ccgggcaggt aatcgaaaat
     4741 gcgcaagcga tgtgccagca actggcgcag cgcggcctga cgctgttaac gggcggtacc
     4801 gactgccatc tgggcattat cgacctgcgc ccgcaggggt taaccggcgc tcaggtggaa
     4861 tactttctcg aactggcggg gatcacggtc aataaaaaca cgttgctagg cgatccacag
     4921 ccgccgtcga ttacctccgg gattcgcatt ggcagcgcag cctgcgccac ccgcgggatg
     4981 aaggccgatg attttacgct gatcgcggac tggatcagtg aaattatttt tgccatcaag
     5041 acgccgaata ttgcagatat ttgcgccgat attcggcaaa aagtgactaa attaaccacc
     5101 aactatccgt tgccttacca atgatgaaac ttgctgaaat tcaggcggcg tgcggcgttc
     5161 tttgtgtaga tctcgccgct gtcgttgaca attatcaaac gctggcgcgc catgtcgccc
     5221 ccgcgcaatg cggcgcagta ctgaaagcca atggctatgg cttgggggcg gaggcgattg
     5281 cgccagccct gtatgcggcc aattgccgga tcttttttgt cgcgcaactt tctgaagggg
     5341 tggcgctacg taacatcctg tcggctgacg cgatggtggt gttgcttaat ggcgtcatgc
     5401 cgcaggcgat gccgttttgt tgcgcgcaac agatcacacc attgttgaat tccgttgacc
     5461 aggtgatgac gtggctggcg ttacaggagg ctcggtcgca gcgg
//
LOCUS       DAGWFR010000226         5492 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.229, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000226 DAGWFR010000000
VERSION     DAGWFR010000226.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 5492)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5492)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5492
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.229"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..576)
                     /gene="aceF"
                     /locus_tag="MOX77_004225"
     CDS             complement(<1..576)
                     /gene="aceF"
                     /locus_tag="MOX77_004225"
                     /EC_number="2.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459158.2"
                     /note="E2 component of pyruvate dehydrogenase multienzyme
                     complex; in Escherichia coli AceF contains three
                     N-terminal lipoyl domains; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex
                     dihydrolipoyllysine-residue acetyltransferase"
                     /protein_id="HCA3359615.1"
                     /translation="MAIEIKVPDIGTDEVEITEILVKVGDKVEAEQSLITVEGDKASM
                     EVPSPQAGVVKEIKVSVGDKTETGALIMIFDSADGAADAAPAQAEEKKEAAPAAAPAA
                     AAAKDVHVPDIGSDEVEVTEVMVKVGDTVEAEQSLITVEGDKASMEVPAPFAGTVKEI
                     KVNTGDKVSTGSLIMVFEVAGEAGAAAPAKAE"
     gene            complement(591..3254)
                     /gene="aceE"
                     /locus_tag="MOX77_004226"
     CDS             complement(591..3254)
                     /gene="aceE"
                     /locus_tag="MOX77_004226"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008814576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring),
                     homodimeric type"
                     /protein_id="HCA3359616.1"
                     /translation="MSERFQNDVDPIETRDWLQAIESVIREEGVERAQYLIDQLLSEA
                     RKGGVKVAAGAGASNYINTIAVEDEPEYPGNLELERRIRSAIRWNAIMTVLRASKKDL
                     ELGGHMASFQSSATIYDVCFNHFFRARNEQDGGDLVYFQGHISPGIYARAFLEGRLTQ
                     EQMDNFRQEVHGNGLSSYPHPKLMPEFWQFPTVSMGLGPIGAIYQAKFLKYLEHRGLK
                     DTSKQTVYAFLGDGEMDEPESKGAITIATREKLDNLVFVINCNLQRLDGPVTGNGKIV
                     NELEGIFAGAGWNVIKVMWGGRWDELLRKDTSGKLIQLMNETVDGDYQTFKSKDGAYV
                     REHFFGKYPETAALVADWTDEQIWALNRGGHDPKKVYAALKKAQETKGKATVILAHTI
                     KGYGMGDTAEGKNIAHQVKKMNMDGVRYVRDRFNVPVADADLEKLPYITFPEGSEEHK
                     YLHERRQALHGYLPSRQPNFTEKLELPQLSDFGALLEEQSKEISTTIAFVRALNVMLK
                     NKSIKDRLVPIIADEARTFGMEGLFRQIGIYSPNGQQYTPQDREQVAYYKEDEKGQIL
                     QEGINELGAGASWLAAATSYSTNDLPMIPFYIYYSMFGFQRIGDLCWQAGDQQARGFL
                     IGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYDPAYAYEVAVIMHDGLERMYGEK
                     QENVYYYITTLNENYHMPAMPAGAEEGIRKGIYKLETLEGSKGKVQLLGSGSILRHVR
                     EAAEILAKDYGVGSDVYSVTSFTELARDGQDCERWNMLHPLETPRVPYIAQVMNDAPA
                     VASTDYMKLFAEQVRTYVPADDYRVLGTDGFGRSDSRENLRHHFEVDASYVVVAALGE
                     LAKRGEIDKKVVADAITKFNIDADKVNPRLA"
     gene            complement(3414..4178)
                     /gene="pdhR"
                     /locus_tag="MOX77_004227"
     CDS             complement(3414..4178)
                     /gene="pdhR"
                     /locus_tag="MOX77_004227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex transcriptional
                     repressor PdhR"
                     /protein_id="HCA3359617.1"
                     /translation="MAYSKIRQPKLSDVIEQQLEFLILEGTLRPGEKLPPERELAKQF
                     DVSRPSLREAIQRLEAKGLLLRRQGGGTFVQSSLWQSFSDPLVELLSDHPESQFDLLE
                     TRHALEGIAAYYAALRSTDEDKDRIRELHHAIELAQESGDLDAESEAVLQYQIAVTEA
                     AHNVVLLHLLRCMEPMLAQNVRQNFELLYARREMLPLVSTHRTRIFEAIMAGKPEEAR
                     EASHRHLAFIEEIMLDRSREESRRERALRRLEQRKN"
     gene            4741..>5492
                     /locus_tag="MOX77_004228"
     CDS             4741..>5492
                     /locus_tag="MOX77_004228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HCA3359618.1"
                     /translation="MMDSQQHGEQLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSA
                     GPGIILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFSHFAYKYWGGFAGFASGWNYWVL
                     YVLVAMAELTAVGKYIQFWYPEIPTWASAAAFFVIINAINLTNVKVFGEMEFWFAIIK
                     VIAVIAMILFGAWLLFSDTAGPQATVRNLWEQGGFLPHGWTGLVMMMAIIMFSFGGLE
                     LVGITAAEADNPEQSIPKATNQVIYRILIFYIG"
BASE COUNT         1218 a         1470 c         1405 g         1399 t
ORIGIN      
        1 ttccgctttc gctggtgctg ctgcgcccgc ttcacccgcc acttcgaaga ccataatcag
       61 agagccggta gacactttat caccggtgtt cactttgatc tctttcacgg tgcctgcaaa
      121 cggagcagga acttccatag aggccttgtc gccttcgacg gtgatcagcg actgttcagc
      181 ttctacggtg tcgcccactt tcaccatcac ttcagtcact tcaacttcgt cactgccgat
      241 atccggaacg tgaacgtctt tcgccgctgc cgcagcaggt gctgctgccg gcgccgcttc
      301 tttcttctct tctgcctgag caggcgcagc gtcagctgca ccgtcggcgg aatcgaaaat
      361 catgataagt gcaccggtct cagttttgtc gccgacagag actttgatct ctttcacgac
      421 gccagcctgc ggagacggga cttccataga ggctttgtcg ccttctacgg tgatcagcga
      481 ctgttcagct tcaactttgt cgcccacttt gaccagaatc tcggtgattt caacttcatc
      541 tgtcccgatg tccggtactt tgatttcgat agccattatt cttttacctc ttacgccaga
      601 cgcgggttaa ctttatctgc atcgatgttg aatttggtaa tcgcatccgc taccactttc
      661 ttgtcgattt cgccacgttt agccagttcg cccagcgctg cgacaaccac ataagaagca
      721 tcaacttcga aatggtgacg caggttctca cggctgtcgg aacgaccgaa gccatccgta
      781 cccagtacgc gatagtcgtc agccggtacg taagtacgaa cctgctcggc gaacagtttc
      841 atatagtcag tagatgccac agccggagcg tcgttcatca cctgagcgat gtacggtacg
      901 cgcggggttt ccagcgggtg cagcatgttc cagcgctcac aatcctgacc atcacgcgcc
      961 agttcggtga aggaggtcac gctatatacg tcagaaccta cgccgtaatc tttcgccagg
     1021 atctctgccg cttcacggac gtgacgcagg atagaaccgg agcccagcag ctgaacttta
     1081 cctttgctac cttcgagggt ttcgagtttg tagatacctt tacggatacc ttcctcggca
     1141 cctgctggca ttgccggcat gtggtagttt tcgttcaggg tggtgatgta gtagtaaacg
     1201 ttctcttgtt tttcaccgta catacgctcc agaccatcat gcatgatgac agccacttca
     1261 taagcgtaag ccgggtcgta agagatacag ttcgggatag tcagcgactg aatgtggctg
     1321 tgaccatctt cgtgctgcag accttcgccg ttcagcgtag tacgaccgga agtcccgcca
     1381 atcaggaagc cgcgagcctg ctggtcgcca gcctgccagc acaggtcgcc gatacgctgg
     1441 aacccgaaca tagagtagta gatgtagaac gggatcatcg gcagatcgtt ggtgctgtaa
     1501 gaggtcgccg cagccagcca ggatgcgcct gcgcccagct cgttgatacc ttcctgcaga
     1561 atctggcctt tctcgtcttc tttgtagtaa gcaacctgct cacggtcctg cggggtgtac
     1621 tgctggccgt tcgggctgta gataccaatc tgacggaaca gaccttccat accgaaagta
     1681 cgcgcttcgt cggcgatgat cggaaccaga cgatctttga tcgacttgtt cttcagcatc
     1741 acgttcaggg cacgcacgaa agcgatcgta gtggaaatct ctttactttg ctcttccagc
     1801 agcgcgccga aatctgaaag ttgaggcagc tctaacttct cggtgaagtt cggctgacgg
     1861 cttggcaggt agccgtgcag cgcctgacgg cgttcatgca ggtatttgtg ttcttcagaa
     1921 ccttccggga aggtaatgta cggcagtttt tcgagatcag catcggcaac cggcacgttg
     1981 aaacgatcgc ggacgtaacg cacgccgtcc atgttcattt tcttaacctg gtgagcgatg
     2041 tttttacctt ccgcggtgtc acccatgccg taacctttaa tggtatgggc caggattacg
     2101 gtcgctttgc ctttggtttc ctgcgctttt ttcagtgccg cgtagacttt cttcggatcg
     2161 tgaccaccac ggttcagcgc ccaaatctgc tcgtcagtcc agtcggccac cagcgcggcg
     2221 gtttccggat atttaccgaa gaagtgctca cgcacgtaag cgccgtcttt ggatttgaag
     2281 gtctggtagt cgccgtcaac ggtttcgttc atcagctgga tcagtttacc gctggtgtct
     2341 ttacgcagca gttcatccca acgaccgccc cacatgactt tgataacgtt ccagccagca
     2401 cctgcaaaga tgccttccag ttcgttaaca atcttgccgt taccggtgac cgggccgtca
     2461 agacgctgca ggttacagtt gataacaaaa accaggttgt ccagtttttc acgggtggcg
     2521 atggtgatcg cgcctttgga ttccggctca tccatctcgc cgtcgccgag gaaggcgtaa
     2581 acggtctgtt tagaggtatc tttcaggcca cggtgttcca gatatttcag gaatttcgcc
     2641 tggtagatag caccgattgg gcccagcccc atagagacgg tcgggaactg ccagaattcc
     2701 ggcatcagtt tcgggtgcgg ataggaagag aggccattgc cgtgaacttc ctgacggaag
     2761 ttatccatct gttcctgggt cagacgacct tccaagaacg cgcgagcgta gatgcccgga
     2821 gagatgtggc cctggaagta caccaggtcg ccgccatcct gttcgttgcg cgcacggaag
     2881 aaatggttaa aacagacatc atagatcgtg gcggaagact ggaaggacgc catgtggccg
     2941 cccaactcaa ggtctttttt agacgcgcgc agcacggtca tgatggcgtt ccagcggatc
     3001 gcagaacgaa tgcgacgttc cagctccaga ttacccgggt attccggttc gtcttcaacg
     3061 gcaatagtgt tgatgtaatt actggcccct gcgcctgccg cgactttcac gccgccttta
     3121 cgagcttcag aaagcagttg gtcaatcaga tactgagcgc gctcaacacc ttcttcacgg
     3181 ataaccgatt cgatcgcctg tagccagtcg cgagtttcga tcggatccac gtcattttgg
     3241 aaacgttctg acatgggggt attccttatc tatctaatac gttgagttat ctggaacctg
     3301 tcccattaaa ctttcgtcag aaagcttaat aagacaggtt ctgcgtttag ttgccgcgca
     3361 catttttgcg cgttattcac aacatcttct ggttaacgtt ctgccagaaa aaactaattc
     3421 ttgcgctgtt ccaggcggcg taaagcgcgt tcacgacggc tctcctcacg gcttctgtcc
     3481 agcataatct cttcgataaa cgccagatgt cggtgtgacg cttcacgcgc ttcttctggt
     3541 tttccggcca taatggcttc aaatatacgg gtgcgatgcg tgctcaccag cggcagcatc
     3601 tcccgacgcg catacagcaa ttcgaagttc tgccgcacgt tttgcgccag catcggctcc
     3661 atacacctta gcagatgaag caataccacg ttgtgcgccg cttcggtgac ggcgatttga
     3721 tactggagca cggcttcgga ctcggcatcc agatcgccgg actcttgcgc cagctcaata
     3781 gcgtggtgca gctcgcgaat acggtcttta tcttcgtcgg tgctgcgcag cgccgcgtaa
     3841 taagccgcaa tgccttccag cgcatggcgc gtttcgagca ggtcaaactg ggattcaggg
     3901 tgatcggaga gcagttccac cagcgggtcg ctaaagctct gccacaggct gctctgcacg
     3961 aaggttccgc cgccctggcg acgaagcaac aatcccttcg cttcgagacg ttgaatcgcc
     4021 tcgcgcaagg agggacggga gacgtcgaac tgttttgcca gttcacgttc cggtgggagt
     4081 ttttctccgg gacgcaatgt tccctcaagg attaaaaact ccagctgctg ctcgatcaca
     4141 tcggagagtt ttggttggcg gattttgctg taggccatga tttcctgtct taagccattt
     4201 gcccggagtc aattggtctt accaatttca tgtctgtgac gctaaagtaa caaagtattc
     4261 accttctgtc catacaggtt ttgattgaaa tcagtaaagg aggcacattt taacaatttt
     4321 acagaaatca cgtttcaaaa ctgtaactgt gcacaaatgt taaatttacc caccaggagg
     4381 tagatttaac gtatttgaaa cgataaaaaa tctcatctga accgattcaa cagcagatca
     4441 aatgcatttt tatgcataaa taatgaataa aaacaaatta acctttagaa gggaaaataa
     4501 aaggaggtat ttacaagtgc tttcttttta cgcaactcgt catcacccct gcacaaagca
     4561 ggtgcattcg cggccacata ccattattct gatcaagacg aaagagttga agtgacattt
     4621 taaaaaacga gcttgtaaat aaatcaatac aaaaagcgga attgcaaact tacacacgca
     4681 ctactgcatc gttcaaaata agcgcgttat gaataaaccg cgcccgatac acgaggtttt
     4741 atgatggaca gtcagcagca cggcgagcag ctcaagcgcg gcctgaaaaa ccgccatatt
     4801 cagcttatcg cattgggcgg cgcgataggg acaggcttgt tcctgggaag cgcctccgtt
     4861 attcagtcgg cggggccagg aattatcctg ggctatgcga ttgcaggctt tattgccttt
     4921 ctgattatgc gccagctggg agagatggtg gttgaagaac cggtcgccgg ctcttttagc
     4981 cacttcgcct ataaatactg gggcggcttt gccggattcg cttccggctg gaactactgg
     5041 gtgctgtacg tattagttgc catggcggaa ctgaccgcag tgggtaaata tatccagttc
     5101 tggtatccgg agatccccac ctgggcttct gcggcagcct tctttgtgat tatcaacgcc
     5161 atcaacctga ccaacgttaa agtgttcggt gagatggagt tttggttcgc cattattaaa
     5221 gtgatcgccg tcatcgctat gattctgttc ggcgcgtggt tactcttcag cgataccgct
     5281 ggtccgcagg ccaccgtgcg caacctgtgg gaacagggcg gctttctgcc gcatggctgg
     5341 accgggctgg tgatgatgat ggccattatt atgttttcgt tcggcggact ggagctggta
     5401 gggatcaccg ccgctgaagc cgataacccg gaacagagca tccccaaagc taccaatcag
     5461 gttatctatc gcatcctgat tttttatatc gg
//
LOCUS       DAGWFR010000227         5480 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.230, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000227 DAGWFR010000000
VERSION     DAGWFR010000227.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 5480)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5480)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5480
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.230"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..489)
                     /gene="ftsX"
                     /locus_tag="MOX77_004229"
     CDS             complement(<1..489)
                     /gene="ftsX"
                     /locus_tag="MOX77_004229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462470.1"
                     /note="ABC transporter, membrane protein; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsX"
                     /protein_id="HCA3359619.1"
                     /translation="MNRRDAINQIRQFGGRLDRLRKSRGGTGGGRNAPGRQKPTPKPN
                     SRKTNVFNEQVRYAWHGALQDLKSKPLATFLTVMVIAISLTLPSVCYMVYKNVNQAAT
                     QYYPSPQITVYLQKTLDDDAAARVVGQLQAEQGVEKVNYLSREDALGEFRNWSGFGGA
                     LDM"
     gene            complement(482..1150)
                     /gene="ftsE"
                     /locus_tag="MOX77_004230"
     CDS             complement(482..1150)
                     /gene="ftsE"
                     /locus_tag="MOX77_004230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HCA3359620.1"
                     /translation="MIRFEHVSKAYLGGRQALQGVTFHMRPGEMAFLTGHSGAGKSTL
                     LKLICGIERPSAGKIFFSGHDITRLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAI
                     PLIIAGASGDDIRRRVSAALDKVGLLDKARNFPIQLSGGEQQRVGIARAVVNKPAVLL
                     ADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRQLVLSDGHLHGG
                     LANE"
     gene            complement(1153..2628)
                     /gene="ftsY"
                     /locus_tag="MOX77_004231"
     CDS             complement(1153..2628)
                     /gene="ftsY"
                     /locus_tag="MOX77_004231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HCA3359621.1"
                     /translation="MAKQKKRGFFSWLGFGDKEQKQEQTEEQQIVEEQRPVEPPVETA
                     ADVDAQTPAHSKAETEAFAEEVVDVTEKVQESEKPQPVEPEPTAAIEMAAPQIAVERE
                     ELPLPEEVKDEAISPEEWQAEAETVEVIAAVEEEGENAAKFTDEELEAQALAAQAAEE
                     AVMVVPPAEEDAPVEAIVQEQEKPTKEGFFARLKRSLLKTKENLGSGFISLFRGKKID
                     DDLFEELEEQLLIADVGVETTRKIIANLTEGASRKQLKDAEALYGLLKDEMGEILAKV
                     DEPLNIEGKTPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQL
                     QVWGQRNNIPVIAQHTGADSASVIFDAIQAAKARNVDVLIADTAGRLQNKSHLMEELK
                     KIVRVMKKLDEEAPHEVMLTIDASTGQNAVSQAKLFHEAVGLTGITLTKLDGTAKGGV
                     IFSVADQFGIPIRYIGVGERIEDLRPFKADDFIEALFARED"
     gene            2754..3350
                     /gene="rsmD"
                     /locus_tag="MOX77_004232"
     CDS             2754..3350
                     /gene="rsmD"
                     /locus_tag="MOX77_004232"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase"
                     /protein_id="HCA3359622.1"
                     /translation="MKKPTHSGSGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLF
                     NWLAPVMVDAHCLDCFAGSGALGLEALSRYAAQATLLEMDRAVSQQLQKNLATLKANN
                     ARVVNTNTLAFLSQPGTPHHVVFVDPPFRKGLLEETLQLLETQGWLADDALIYVESEV
                     ENGLPPVPANWALYREKVAGQVAYRLYQRDAQGENDVD"
     gene            3340..3609
                     /locus_tag="MOX77_004233"
     CDS             3340..3609
                     /locus_tag="MOX77_004233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1145 family protein"
                     /protein_id="HCA3359623.1"
                     /translation="MLINLGRLLMLFVWAFLILNLVHPFPRPLNIFVNVALVFMALMH
                     GMQLALLKSTIPKAGPQMTTGEKIRIFLFSVFELLVWQKKFKNKK"
     gene            complement(3631..4002)
                     /locus_tag="MOX77_004234"
     CDS             complement(3631..4002)
                     /locus_tag="MOX77_004234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2500 domain-containing protein"
                     /protein_id="HCA3359624.1"
                     /translation="MSKPPLFFIIIIALIVVAASFRFVQQRREKAANEAAPLQQKQVV
                     VSNKREKPVNDRRSRQQEVSPAGTSMRYEASFKPLNGGLEKTFRLQAQQYHALTVGDQ
                     GTLSYKGTRFVGFVSRTPDNE"
     gene            4144..4770
                     /locus_tag="MOX77_004235"
     CDS             4144..4770
                     /locus_tag="MOX77_004235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysoplasmalogenase"
                     /protein_id="HCA3359625.1"
                     /translation="MLWSFIAVCLSAWLYVDASYRGPAWQRWVFKPVTLLLLLLLAWQ
                     APMFDAISYLVLAGLCASLVGDALTLLPRQRLLYAVGAFFLSHLLYTIYFASQMTLSF
                     FWPLPLALLIVGALLIAVIWTRLEELRWPVCTFIAMTLVMVWLAGELWFFRPTAPALS
                     AFTGATLLFIGNIVWLGSHYRRRFRADNAIAAACYFAGHFLIVRSLYL"
     gene            4851..>5480
                     /locus_tag="MOX77_004236"
     CDS             4851..>5480
                     /locus_tag="MOX77_004236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HCA3359626.1"
                     /translation="MSTPDTDGKKVPPFTSFRLAPAIQKADSCCCEEHCASSAPVSTA
                     VAGTRYTWKISGMDCAACARKVENAVRQIRGVNQAQVLFATEKLVVDADTDLRAQIEH
                     AVQKAGYTLRSEDSRDAAPESRLKENLPLITLIIMMAISWGLEQFNHPFGQLAFIVTT
                     LVGLYPIARQALRLMKSGSWFAIETLMSVAAIGALFIGATAEAAMVLLLF"
BASE COUNT         1116 a         1619 c         1410 g         1335 t
ORIGIN      
        1 catgtccagc gcgccgccaa aacccgacca gttgcggaat tcgcccagcg cgtcctcacg
       61 ggacaggtag ttgaccttct caacgccctg ctcggcctga agctgcccaa cgacccgcgc
      121 cgccgcgtca tcatccagcg ttttttgcag ataaacggtg atctgcggcg acggatagta
      181 ctgagtcgcc gcctggttga cgttcttata gaccatgtaa cagacgctgg gcagcgtcag
      241 ggagatggcg atcaccatca ccgtcagaaa cgtcgccagc ggtttgcttt tcagatcttg
      301 cagcgcaccg tgccaagcat agcgcacctg ttcattaaaa acatttgttt tacgtgagtt
      361 cggtttcggc gtcggcttct ggcgtcctgg cgcgttgcgc ccgccgcctg ttccgccgcg
      421 agacttacgc agtcgatcca gccgtccgcc gaactgcctg atttggttaa tcgcgtcgcg
      481 cctattcatt ggccaggcct ccatgcagat gtccatcgct caggacgagc tgcctatagg
      541 aacgacgcga gataagtcca atatcgtgcg tcgccatcag taccgtcacc cctacgcggt
      601 taaactcttc aaacagacgt aaaatccctt ccgacaacgc gtcgtccagg ttcccggtcg
      661 gttcatccgc cagcaatacc gctggcttat tgaccaccgc gcgggcgatg cccacgcgct
      721 gttgttcgcc tccggagagt tgaatcggga agtttctcgc tttgtccagt agtccaacct
      781 tatccagcgc cgccgacaca cgacgacgga tatcatcgcc gctggcgccg gcaatgatta
      841 acggtatcgc cacattgtca tagaccgtgc gatccatcag cagatggtga tcctggaaaa
      901 tcatcccaat ctggcggcgc aaaaacggca cttcgcggtt tttcaggcgc gtaatatcat
      961 gcccgctgaa gaagattttg ccggcgctgg gccgctcaat cccacagatt agcttcagca
     1021 gggtactttt ccccgcgccg gagtggccgg tcagaaacgc catctcgcct ggccgcatat
     1081 ggaatgtcac tccctgcagc gcttgtctcc cgccgagata ggccttgctg acatgttcaa
     1141 agcgaatcat tgttaatcct ctcgggcaaa aagtgcctca ataaaatcgt ccgccttaaa
     1201 cggacgcaaa tcctcgatac gttcgcccac gccaatgtaa cggataggaa tgccaaactg
     1261 gtcagctacc gagaaaatca ccccgccttt cgccgtaccg tccagcttgg tcagggtaat
     1321 accggttaag cccaccgctt catggaacag tttggcctgg cttaccgcgt tctgtccggt
     1381 gctggcgtca atggtcagca taacttcatg tggcgcttct tcgtccagct ttttcatgac
     1441 gcgaacgatt tttttcagct cttccatcag gtgcgacttg ttctgcaaac gccctgccgt
     1501 atcggcaatt aacacatcca cattacgcgc cttcgcggcc tggatagcgt caaaaatcac
     1561 cgaggcggag tccgcgccgg tatgctgggc gataaccgga atgttgttac gctgtcccca
     1621 gacctgtagc tgttcgaccg ccgccgcgcg gaaagtatcc cccgccgcca gcatcactga
     1681 tttaccctgc tgctcaaact ggcgcgccag tttaccgata gtggtggttt tacccacgcc
     1741 gttcacgcca accatcagaa taacaaaagg cgttttacct tcaatattaa gcggttcgtc
     1801 taccttcgcc agaatctcgc ccatctcgtc tttcaacaga ccatacagcg cctcggcatc
     1861 tttaagctgt ttgcggctgg cgccttccgt cagattagcg ataatcttac gcgtggtttc
     1921 caccccgaca tcagcgatga gcaactgctc ttccagctcc tcgaacaaat catcgtcgat
     1981 tttcttgccg cggaacagac tgataaatcc ggaaccgaga ttttctttgg ttttcagcag
     2041 actgcgtttc aggcgggcaa agaaaccttc tttagtcggt ttttcctgct cctgaacgat
     2101 cgcttccacc ggcgcgtctt cttccgccgg cggaacaacc atcaccgcct cttccgccgc
     2161 ctgagcggcc agcgcctgcg cttccagctc ttcgtcggtg aatttcgccg cgttttcgcc
     2221 ctcttcttct accgcggcaa tgacctctac ggtttccgct tcggcctgcc actcttccgg
     2281 cgagatagcc tcgtctttga cctcttccgg cagcggcaat tcctcgcgtt ccaccgcgat
     2341 ctgcggcgct gccatctcaa tggccgccgt gggctccggc tctaccggct gcggtttttc
     2401 gctctcctga actttctcag taacgtccac cacctcttcc gcaaaggctt ctgtttctgc
     2461 tttgctgtgc gcgggcgttt gcgcgtctac gtctgccgcc gtttcaacag ggggctcaac
     2521 cggtcgttgt tcctcaacaa tctgctgttc ttcggtctgt tcctgcttct gctctttatc
     2581 accgaagccc aaccaggaaa agaagccacg ttttttctgt tttgccatct gcgactacac
     2641 ccctcgcggc gctatataca tggaagctaa aaaaatgatg aaatagtcta tcacttaact
     2701 taattcacat caccgcctgg aataacttgc aacaggcggt tcgagcaaga gaaatgaaaa
     2761 aaccgactca ctctggcagc ggccaaatcc gcattattgg cgggcaatgg cgtggccgta
     2821 aattaccggt tccggacagc ccgggtctgc gtcctaccac cgatcgcgtg cgcgaaacgt
     2881 tatttaactg gctggctccg gtaatggtag acgcccattg tctggattgc tttgccggca
     2941 gcggcgcgct gggtctggaa gcgctatcgc gttatgcggc ccaggcaacg ttactggaaa
     3001 tggatcgcgc cgtatcgcag cagttgcaaa aaaatctggc gacgctgaaa gccaacaatg
     3061 ctcgcgtcgt caataccaat actctggcct tcctcagcca gccggggacg ccgcatcacg
     3121 tcgtctttgt cgacccgccg tttcgtaaag gactgctgga agagacgtta caattgctag
     3181 aaacccaggg atggctggcc gacgacgcgc taatctacgt agaaagcgag gtggaaaacg
     3241 gtctgccgcc cgttccggcg aactgggcat tgtatcgaga aaaggtggcc ggacaggtcg
     3301 cttatcgtct gtatcagcgc gacgcgcaag gagaaaatga tgttgattaa tctgggccgc
     3361 ttattaatgc tcttcgtgtg ggcatttttg attcttaatc tggtgcatcc cttcccgcgc
     3421 ccgctcaata tcttcgtcaa cgtggcgttg gtgttcatgg cgctgatgca cggtatgcag
     3481 ttggcgttgc tgaaatcaac gataccgaaa gcgggtccgc agatgacgac gggagagaaa
     3541 atccgcattt tcctgttcag cgtgtttgag ctgctggtct ggcagaagaa gtttaagaac
     3601 aaaaaataac gtttgctgcc ggatgacggt ttattcgtta tccggggtac ggctaacaaa
     3661 tccgacgaac cgcgttccct tatagcttag cgtaccttga tcgcccaccg tcaaagcgtg
     3721 gtactgctgc gcttgtaaac ggaacgtttt ttccagaccg ccattgagcg gcttaaaact
     3781 ggcctcatag cgcatactgg ttcccgccgg gctcacttcc tgctggcgag agcgtcggtc
     3841 gttaaccggc ttctcccgtt tattgctgac cacgacctgc ttttgctgta acggcgccgc
     3901 ctcattagcg gctttttccc gccgttgctg aacgaagcgg aacgacgcgg caactacgat
     3961 taatgcaatg attataatga agaaaagcgg tggcttactc atactgttaa cctgtcagaa
     4021 aatgcggaaa taagcatacc ctgcccgtta tagtgttgtc atctgaccgt cacggcctct
     4081 acactgaata atagagccgc aagcataccg tttgcgaaaa aataacgaat tcaaggaatt
     4141 aagatgcttt ggtcgtttat cgctgtctgc ctgtccgcat ggctgtatgt ggacgcctcc
     4201 tatcgcgggc cagcctggca acgctgggtt tttaagcccg tcacgttatt actgttgctg
     4261 ttactggcct ggcaagcgcc gatgtttgac gccatcagtt atcttgtgtt ggccggactg
     4321 tgcgcctcgc tggtcggcga tgcgttaacg ctcttaccgc gtcaacgcct gctgtacgcc
     4381 gtcggggcat ttttcttatc gcatctgctc tacaccattt actttgccag ccaaatgacg
     4441 ttgtcgttct tctggccgct gccgctggcg ttactgatag tcggcgcgtt gcttatcgcc
     4501 gttatctgga cgcgactgga ggagctacgc tggccggtat gtacttttat cgccatgacg
     4561 ctggtcatgg tctggctggc gggcgaactg tggttcttcc gcccaacggc gccagccctt
     4621 tcggccttta ccggcgcgac gctgctgttc atcggcaata tcgtctggct gggtagccat
     4681 taccgccgcc gtttccgggc ggataacgcg attgccgccg cctgctactt tgcaggacac
     4741 ttcctgattg ttcgctcgct gtacctgtaa ataatagcgc ttgactctgg agtcgactcc
     4801 agagtgtatc ctccggttaa tgagaaaatt atcatcaacc ggaggacgtt atgtcgaccc
     4861 ctgataccga tggcaaaaaa gtcccgccct ttacctcctt cagattagcc ccggcaatac
     4921 agaaggccga tagctgctgc tgcgaagaac attgcgcgtc cagcgcgcct gtttctactg
     4981 ccgtggcagg cacgcgctat acctggaaaa tctccggcat ggactgcgcc gcctgcgccc
     5041 gaaaagtgga gaatgcggta cgccaaattc gcggcgtcaa ccaggcgcaa gtgctgttcg
     5101 ccaccgaaaa gttagtggtc gatgccgaca ccgacctccg cgcgcaaatt gaacacgccg
     5161 tacagaaggc gggttatacc ttgcgtagtg aagattcgcg cgacgccgcg cctgaatctc
     5221 gtcttaaaga gaacctgccg cttattacgc tgatcattat gatggcgata agctgggggc
     5281 tggagcaatt taaccacccg ttcggccaac tggcctttat cgtcaccact ctggtcggtc
     5341 tgtatcctat tgcccgccag gcgctgcggc tgatgaaaag cggcagttgg ttcgctattg
     5401 aaacgctgat gagcgtcgcc gccattggcg cgctgtttat aggcgcgacg gcggaggcag
     5461 caatggtatt gctgctgttc
//
LOCUS       DAGWFR010000228         5456 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.231, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000228 DAGWFR010000000
VERSION     DAGWFR010000228.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 5456)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5456)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5456
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.231"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            21..1391
                     /gene="proY"
                     /locus_tag="MOX77_004237"
     CDS             21..1391
                     /gene="proY"
                     /locus_tag="MOX77_004237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline-specific permease ProY"
                     /protein_id="HCA3359627.1"
                     /translation="MESNNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSV
                     LLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQENLGPLAGYITGWTYCFEILIV
                     AIADVTAFGIYMGVWFPAVPHWIWVLSVVLIICAINLMSVKMFGELEFWFSFFKVATI
                     IIMIVAGIGIIVWGIGNGGQPTGIHNLWSNGGFFSNGWLGMIMSLQMVMFAYGGIEII
                     GITAGEAKDPEKSIPRAINSVPMRILVFYVGTLFVIMSIYPWNQVGTNGSPFVLTFQH
                     MGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKVFAKTSRRGIPWVT
                     VLVMTIALLFAVYLNYIMPENVFLVIASLVTFATVWVWIMILLSQIAFRRRLPPEEVK
                     ALKFKVPGGVVTTIAGLIFLVFIIALIGYHPNTRISLYVGFAWIVLLLIGWIFKRRRD
                     RQLAQA"
     gene            1553..3370
                     /gene="malZ"
                     /locus_tag="MOX77_004238"
     CDS             1553..3370
                     /gene="malZ"
                     /locus_tag="MOX77_004238"
                     /EC_number="3.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltodextrin glucosidase"
                     /protein_id="HCA3359628.1"
                     /translation="MLNAWHLPVAPFVKQHNDKLTITLWLSGENPPSRVTLRSEFDNE
                     EISLAMRKQRRQPQPGVTAWRATLNIALGQPRRRYSFKLLWHDRQRWFTPQGFSCFPP
                     ARLEQFAVDVPDSGPQWVADQIFYQIFPDRFARSATREADQDRVYYHHAAGQEIVLRD
                     WDDPLTPQAGGSTFYGGCLNGICEKLPYLKKLGVTALYLNPVFTAPSVHKYDTEDYRH
                     VDPQFGGDRALLRLRRETQAQGMRLVLDGVFNHSGDSHAWFDRHNRSTGGACHHPDSP
                     WRDWYSFSPQGVALDWLGYPSLPKLDYQSETLVDEIYRGEDSIVRHWLKAPWNMDGWR
                     LDVVHMLGEAGGARHNLQHVAGITRAAKEAQPEAYIVGEHFSDARQWLQADAEDAAMN
                     YRGFTFPLWGFLANTDIAYEPQHIDARTCIAWMDNYRAGLSHQQQLRMFNQLDSHDTA
                     RFKTLLGKDAARLPLAVVWLFTWPGVPCIYYGDEVGVDGANDPMCRKPFPWDERKQDG
                     NLLALYQRMAKLRQSSLALRRGGCQALYAEGDVVVFVRVYQQQRALVAINRGEACEVA
                     LEALPLLNVAGWQCKTGSGDIREGRLSLPAISATVWMNR"
     gene            complement(3442..4044)
                     /locus_tag="MOX77_004239"
     CDS             complement(3442..4044)
                     /locus_tag="MOX77_004239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HCA3359629.1"
                     /translation="MVLVTRQAPDFTAAAVLGSGEIVDKFNFKQHTNGKTTVLFFWPM
                     DFTFVCPSELIAFDKRYEEFQKRGVEVVGVSFDSEFVHNAWRNTPVDKGGIGPVKYAM
                     VADVKREIQKAYGIEHPDEGVALRGSFLIDANGIVRHQVVNDLPLGRNIDEMLRMVDA
                     LQFHEEHGDVCPAQWEKGKEGMNASPDGVAKYLAENISSL"
     gene            complement(4254..4835)
                     /gene="acpH"
                     /locus_tag="MOX77_004240"
     CDS             complement(4254..4835)
                     /gene="acpH"
                     /locus_tag="MOX77_004240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP phosphodiesterase"
                     /protein_id="HCA3359630.1"
                     /translation="MNFLAHLHLAHLADSSLSGNLLADFVRGNPATHYPPDVVEGIYM
                     HRRIDVMTDNLPEVREAREWFRHETRRVAPITLDVMWDHFLSRHWTQISPDFPLQAFV
                     GYAHAQVATILPDSPPRFVNLNDYLWSEKWLERYRDMDFIQNVLNGMANRRPRLDALR
                     DSWYDLDAHYDALEERFWHFYPRMMAQAARKAL"
     gene            4929..>5456
                     /locus_tag="MOX77_004241"
     CDS             4929..>5456
                     /locus_tag="MOX77_004241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-adenosylmethionine:tRNA
                     ribosyltransferase-isomerase"
                     /protein_id="HCA3359631.1"
                     /translation="MRVTDFSFELPESLIAHYPQPERSRCRLLSLEGPTGALTHGTFT
                     DLLDKLNPGDLLVFNNTRVIPARLFGRKASGGKIEVLVERMLDDKRILAHIRASKAPK
                     PGTELLLGDDESIHATMTARHGALFEVEFNDPRPVLDILNAIGHMPLPPYIDRPDEDA
                     DRELYQTVYSEKPGAV"
BASE COUNT         1175 a         1452 c         1567 g         1262 t
ORIGIN      
        1 tgttgatagg tcagaaattg atggaaagca ataataagct aaagcgtggg ctgagcaccc
       61 ggcacattcg ctttatggca ttaggttcgg caatcggcac cggcctgttt tacggctcgg
      121 cggacgccat caaaatggcg gggccgagcg tgctgttggc ctatattatt ggcggggtcg
      181 cggcatatat cattatgcgc gcattggggg aaatgtccgt tcacaaccct gccgccagct
      241 cattttcgcg ctatgcgcag gaaaacctcg gcccgcttgc gggctacatt accggctgga
      301 cctactgttt tgagatcctg atcgtcgcca ttgctgacgt gaccgcgttc ggcatttaca
      361 tgggggtctg gttccccgcc gtgccgcact ggatttgggt gcttagcgtg gtgctgatca
      421 tttgcgccat caacctgatg agcgtcaaga tgttcggcga gctggagttt tggttctcct
      481 tcttcaaagt cgccaccatt attatcatga ttgtcgcggg tatcggcatc attgtgtggg
      541 gaattggcaa cggcgggcag ccgactggca ttcataacct gtggagcaac ggcggcttct
      601 tcagcaatgg ctggctggga atgatcatgt cgctgcaaat ggtgatgttc gcttacggcg
      661 ggattgagat tatcggtatc accgccgggg aagcgaaaga cccggagaaa tccattccgc
      721 gcgccattaa ctcagtaccg atgcgtatcc tggtatttta tgtcggcacg ctgttcgtca
      781 ttatgtctat ctatccgtgg aatcaggtcg gcacaaacgg cagcccattt gtgctgacgt
      841 tccagcatat ggggattacc tttgccgcca gcattctgaa ctttgtggta ttgaccgcct
      901 cgctttccgc tatcaactcc gatgtgtttg gcgtaggccg tatgctgcat ggtatggcgg
      961 agcaggggag cgcgccgaaa gtctttgcca aaacgtcacg ccgtggtatt ccgtgggtca
     1021 ctgtgctggt gatgacgatt gcgctgctgt ttgcggttta cctgaactac atcatgccgg
     1081 aaaacgtctt cctggtgatt gcctcgctgg tgacgtttgc gacggtatgg gtatggatta
     1141 tgatcctgct gtcgcaaatc gccttccgtc gtcgtttacc gccggaagag gtaaaagcgc
     1201 tgaagtttaa ggtgccgggc ggtgtcgtaa cgacgatagc gggtctgatt ttcctggtct
     1261 tcattattgc gcttatcggc taccatccga atacccgcat ctcactgtat gtgggcttcg
     1321 cctggatagt tctgctgttg attggctgga tatttaaacg ccgtcgcgac cgtcaattgg
     1381 cgcaggcgta gtcgtttttc tctgccttat ccggtctgca ggcaacggca ggccggataa
     1441 gcggagccgt ttctcctcct ggagtctcct cccctaataa acccccggat gatgagttat
     1501 cctttaaatc tctgtggcaa ggtggcccca tttttagtag aggggatacg agatgttgaa
     1561 tgcctggcac ttaccggttg ccccgtttgt taagcaacat aacgataaat taaccattac
     1621 gctgtggctg agcggagaaa atccgccgtc tcgcgtgacg ttgcgctcag aattcgataa
     1681 cgaagaaatc tcactggcga tgcgcaaaca gcgccgccag ccgcagccgg gcgtgacggc
     1741 gtggcgagcg acgctcaata tcgcgttagg acagccccgt cgccgttaca gctttaaatt
     1801 gctttggcat gaccgccagc gatggtttac gccgcaggga tttagctgct ttccacccgc
     1861 gcgtctggaa caatttgcgg ttgatgtgcc ggatagcggc ccgcagtggg tcgccgatca
     1921 aattttttat cagatcttcc cggatcgttt tgcccgcagc gcgacgcgtg aagccgatca
     1981 ggaccgagtg tattaccatc atgccgcggg tcaggagatt gtgctgcgcg actgggacga
     2041 tcctttaacc ccccaggcgg gcggttccac cttttacggc ggctgtctga atggcatttg
     2101 tgagaagctg ccgtatctga aaaaactggg cgtcacagcg ctatatctga atccggtatt
     2161 taccgcgccg agcgtccata agtacgacac ggaagattat cgccatgtcg atccgcaatt
     2221 tggcggcgat cgggcgctgc tacgcctgcg gcgtgaaacg caagcacagg gcatgaggct
     2281 ggtgctggat ggcgtgttta accatagcgg cgactcgcat gcgtggtttg acaggcataa
     2341 ccgcagcact ggcggcgcgt gccatcaccc ggactcgccg tggcgcgact ggtactcctt
     2401 ttcaccacaa ggcgtggcgc tggactggct gggttatccg agcctgccga aactcgatta
     2461 tcaatcagaa acgctggtgg atgagatcta tcgcggtgag gacagtatcg ttcgtcactg
     2521 gctaaaggca ccgtggaata tggacggctg gcggctggat gtcgtacata tgctgggcga
     2581 ggcgggcggg gcgcgccaca atttgcagca cgtcgccggc attacccggg cggcaaaaga
     2641 ggcgcagcct gaagcctata ttgtggggga acatttcagc gatgcgcggc agtggctaca
     2701 ggccgatgcg gaagatgccg ccatgaatta tcgcggcttc accttcccgc tgtggggatt
     2761 tctcgccaat actgatatcg cttacgaacc acagcatatt gatgcccgga cctgtatcgc
     2821 gtggatggat aactaccgcg ccggattatc gcaccagcag caactgcgca tgtttaatca
     2881 actcgacagc catgatactg cgcgctttaa aaccctgctg ggtaaagacg cggcgcgcct
     2941 gccgctggcg gtggtctggc tgtttacctg gcccggcgtg ccatgtattt attacggcga
     3001 tgaagtcggc gtggacggcg caaatgaccc catgtgccgc aaaccgttcc catgggatga
     3061 acgcaagcag gacggcaact tgctggcgct gtaccagcgt atggcgaaac tgcgccagag
     3121 cagtctggcg ctgcgtcgtg gcggatgcca ggcgctgtat gccgaaggtg acgtagtggt
     3181 attcgtgcga gtttatcagc agcagcgggc gctggtggcg attaaccggg gcgaggcctg
     3241 tgaagtggcg ctggaagcgt tgccgttgct gaacgtggcc ggatggcaat gtaaaacggg
     3301 aagcggtgac atccgcgagg gaagacttag tttacccgcg atttccgcga cggtatggat
     3361 gaatcgttga ggcgaggtgg ttcataatac ctcacgcata aaaaaggctc gcattcgcga
     3421 gccttttatc aatgcactga cttacaggct ggaaatattc tcagccaggt atttagccac
     3481 gccgtccgga gaggcgttca tgccttcttt gcctttttcc cactgcgccg ggcagacatc
     3541 gccgtgctct tcgtggaact gcagcgcgtc gaccatacgc agcatttcgt cgatgttacg
     3601 acccagcggc agatcgttta cgacctggtg gcgaacaata ccgtttgcgt caatcaggaa
     3661 agagccgcgc agcgcaacgc cttcgtccgg atgttcgata ccgtaagctt tctgaatttc
     3721 acgcttcacg tcagcgacca ttgcgtattt caccgggcca atgccgcctt tatcgacagg
     3781 ggtgttacgc catgcgttgt ggacgaactc agagtcgaaa gaaacgccga ccacttcaac
     3841 gccgcgcttc tggaattctt cataacgttt atcgaaggcg atcagctcag acgggcaaac
     3901 aaaagtgaag tccatcggcc agaagaacag aacggtcgtt ttaccattgg tgtgctgttt
     3961 gaagttgaat ttatcaacaa tctcaccgct acccagtacc gccgcagcgg tgaaatccgg
     4021 ggcctgacga gtaaccagta ccataataat tctcctgcaa tattaagggt tttagaacgc
     4081 aacgcgggca gtatagggag ggcgaagcga caaaacaatg cggtcttgac aatcaatgag
     4141 acagcttttg cctatcgatc gggtcattat aaatcgtaat gatgactcct ttatgacagc
     4201 gaacgatctt tctgccaacg gcggatctga cgcacgccct cgctatcagg ccgtcacagc
     4261 gctttgcggg cggcctgtgc catcatacgc ggataaaaat gccagaagcg ctcttctaac
     4321 gcgtcgtagt gcgcgtccag atcgtaccag gaatcacgca aggcatccag ccggggacgg
     4381 cgattcgcca tgccattcag cacgttttga atgaaatcca tatcgcgata ccgctctaac
     4441 catttttctg accaaagata atcattcagg ttgacaaagc gcggcgggga gtcgggcaga
     4501 atcgtcgcga cctgcgcatg ggcgtagccg acaaacgcct gaagtggaaa atcgggagag
     4561 atttgcgtcc agtggcgcga taaaaaatga tcccacatga cgtccagcgt aatgggcgcc
     4621 acgcgccgcg tttcatggcg gaaccactct cgcgcctcac gaacttccgg caggttgtcg
     4681 gtcatgacgt caatacgccg atgcatataa ataccctcta ccacgtcagg aggataatgc
     4741 gttgccgggt taccgcggac aaaatcggcc agcagattac cggaaagcga gctgtcggca
     4801 aggtgcgcca gatgcaggtg agcaagaaaa ttcattattg attctctgtc caaaaagcgg
     4861 gtaacggttg cagcgggaac gccccggcac tagactaccc gcctcttatt ttagtctgag
     4921 tcagagtcat gcgcgttacc gatttttcct ttgaactacc cgaatccttg attgcccact
     4981 acccacagcc ggaacgcagt cgctgccgtt tgctgtcatt agaggggccg acgggcgcgc
     5041 tgacgcacgg tactttcacc gatctgctcg ataagctcaa ccctggcgat ttgctggtct
     5101 tcaataatac ccgcgtgatc ccggcgcgcc tgtttggccg taaagccagc ggcggcaaga
     5161 tagaagtgct ggtcgaacgt atgctcgatg ataaacgcat cctggcgcat attcgcgctt
     5221 ctaaagcgcc aaaaccgggc acggaactgc tactgggcga tgacgaaagt attcacgcga
     5281 ccatgaccgc gcgtcacggc gctctgtttg aagttgagtt taatgacccg cgtccggtgc
     5341 tggatattct caacgccatc ggccatatgc cgttgccgcc gtatatcgac cgtccggacg
     5401 aggacgccga ccgcgaactg tatcagacgg tttacagtga aaaaccgggc gccgtc
//
LOCUS       DAGWFR010000229         5407 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.232, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000229 DAGWFR010000000
VERSION     DAGWFR010000229.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 5407)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5407)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5407
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.232"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..1233)
                     /gene="fdrA"
                     /locus_tag="MOX77_004242"
     CDS             complement(<1..1233)
                     /gene="fdrA"
                     /locus_tag="MOX77_004242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA synthetase FdrA"
                     /protein_id="HCA3359632.1"
                     /translation="MIHAFIKKGCFQDSVSLMIISRKLSESENVDDVSVMMGTPANKS
                     LLETTGFWHDDFHGATPNDICVAIRTEAVDDGITQVIVRQLEEALQQLAQGSSGSQSL
                     IQVRRWESACQKLPEANLALVSVAGEYAAELAEQALARSLNVMIFSDNVTLDDEIRLK
                     RRARDKGLLVMGPDCGTAMIANTPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGE
                     GITHAIGLGGRDLSAEVGGISALTALDILSADEKSQVLAFVSKPPADAVRQHIIAAMK
                     ATGKPVVALFLGFSSPVAREENVWFASTLDEAARLACLLSRVTSQRKEMVSTGGVIRG
                     LYTGGTLAAEAAGLLAGYLGVATDTEHHHGMMLDADGHQIIDLGDDFYTVGRPHPMID
                     PALRNQLIAGLGAQPQVRV"
     gene            1549..2598
                     /gene="allD"
                     /locus_tag="MOX77_004243"
     CDS             1549..2598
                     /gene="allD"
                     /locus_tag="MOX77_004243"
                     /EC_number="1.1.1.154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ureidoglycolate dehydrogenase"
                     /protein_id="HCA3359633.1"
                     /translation="MKISRETLHQLIENKLYKAGLKREHAAIVADVLVYADARGIHSH
                     GAVRVEYYAERISKGGTNREPTFRIENTGPCTAILHADNAAGQVAAKMGMEHAIEIAK
                     KNGVAVVGISRMGHSGAISYFVRQAAREGLIGLSICQSDPMVVPFGGADIYYGTNPLA
                     FAAPSEGDDIITFDMATTVQAWGKVLDARSRNESIPESWAVDKNGAPTHDPFAVNALL
                     PAAGPKGYGLMMMIDILSGILLGLPFGRQVSSMYEDLHAGRNLGQLHLVINPAFFSSC
                     ELFRKHISQTMQELNSVKPAPGFKQVYYPGQDQDIKQKNADMNGIDIVDDIYQYLISD
                     ALYLKSYETKNPFAQ"
     gene            2620..3855
                     /gene="allC"
                     /locus_tag="MOX77_004244"
     CDS             2620..3855
                     /gene="allC"
                     /locus_tag="MOX77_004244"
                     /EC_number="3.5.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="allantoate deiminase"
                     /protein_id="HCA3359634.1"
                     /translation="MIKHFRHAIEETLPWLSSIGADPTGGMTRLLYSPEWLETQQQFK
                     KRMAESGLETRFDDVGNLYGRLCGTQFPEQVILSGSHIDTVVNGGNLDGQFGALAAWL
                     ALDWLKATYGAPLRTVEVVSMAEEEGSRFPYVFWGSKNIFGLANPEEVRYIQDAKGTG
                     VVDAMQACGFTLPAAPLAARTDIRAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTV
                     TLNGESNHAGTTPMGYRRDTVHAFSRICSQSIEKAKQHGDPLVLTFGKVEPQPNTVNV
                     VPGKTTFTIDCRHTDAAVLREFTEQLENNMRAICDEMDISIDIDLWMDEAPVPMNAEL
                     VAALTRLCETEQLNYRIMHSGAGHDAQIFAPRVPTCMIFVPSINGISHNPAERTNIND
                     LAEGVKTLALMLHQLAWQK"
     gene            3866..4651
                     /gene="allE"
                     /locus_tag="MOX77_004245"
     CDS             3866..4651
                     /gene="allE"
                     /locus_tag="MOX77_004245"
                     /EC_number="3.5.3.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(S)-ureidoglycine aminohydrolase"
                     /protein_id="HCA3359635.1"
                     /translation="MGYLNNVTGYRDDLLANRAIVKHGNYALLTPDGLVKNIIPGFEN
                     CDVTILSTPKLGASFVDYLVTLHQNGGNQQGFGGEGIETFLYVIAGNIEAKAEGKTFS
                     LTQGGYLYCPPGEMMTFSNAQTEDSQLFLYKRRYTPVEGHAPWLVSGNASQLERIHYE
                     GMEDVILLDFLPKELGFDMNMHILSFEPGASHGYIETHVQEHGAYILSGQGVYNLDNN
                     WVPVKKGDYIFMGAYSLQAGYGVGRGEAFSYIYSKDCNRDVMI"
     gene            complement(4730..>5407)
                     /locus_tag="MOX77_004246"
     CDS             complement(4730..>5407)
                     /locus_tag="MOX77_004246"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HCA3359636.1"
                     /translation="GTPLGAEGGNLSRLASIDLQGRDPRISECRIEVACDVDNPLVGP
                     RGAAAVFGPQKGATPEMVETLENGLRNYARILHALTGRDMSQIPGGGAAGGMGIAAIV
                     FLEAEMKPGIEIVMQAVKLEEAVKEASLVITGEGRIDSQTAGGKAPIGVASVAKRHHV
                     PVIGIAGVLGDGVEVVHRHGIDAVFSILPRLAPLPEVLANGEQNLYHSACNIARVIKL
                     GQDIGTR"
BASE COUNT         1314 a         1477 c         1338 g         1278 t
ORIGIN      
        1 cacgcgtacc tgcggttgtg cgccaagccc ggcgataagc tgattacgta acgccgggtc
       61 aatcatcgga tgtggtcgcc caacggtata aaagtcatcg cccagatcga taatctggtg
      121 gccgtcagcg tcaagcatca tgccatggtg atgttccgta tccgtcgcga cgcccagata
      181 gccggccagc agtcccgccg cttccgccgc cagcgttccg ccggtataga gaccacgaat
      241 cacgccgcct gttgaaacca tttctttacg ctgcgacgtc acgcgagaca ataaacatgc
      301 cagtcgggca gcttcatcca gcgtcgaggc aaaccagacg ttttcctcac gcgcaacggg
      361 agaggaaaac cctaagaaca gcgctacaac gggtttcccg gtggctttca tcgccgcgat
      421 aatatgctga cgaaccgcat cagcaggcgg tttggagaca aaggccagca cctggctctt
      481 ttcatccgcg ctgagtatgt ccagtgccgt tagcgcgctg atcccgccga cctcggcgct
      541 caaatcgcgt ccgccaagcc cgatggcatg ggtaatccct tcccccgcca gcgcaatctg
      601 tgaacagagc tcctgaatac cggtgccgga agcgccaatc accccgatgt tgccctctgg
      661 catgacgtta gcgaaagcca gcggcgtatt ggcgatcata gcggtgccgc aatctggccc
      721 catgaccagc agtcccttat cacgcgcccg gcgttttagt ctgatttcgt cgtccagcgt
      781 gacattatcg gagaagatca tcacgttcaa cgaacgagcc agcgcctgct ccgccagttc
      841 cgccgcatat tcgccggcca ccgataccag cgccagattc gcctctggca gtttctgaca
      901 ggcgctttcc cagcgtctga cctggattaa cgactggctg ccgctgcttc cctgcgccaa
      961 ctgctgcaat gcttcttcga gctgtcgcac aatcacctgc gtaatgccgt catctaccgc
     1021 ttcggtacga atcgccacgc aaatgtcatt gggcgtagcg ccatgaaaat cgtcatgcca
     1081 gaaaccggta gtttccagca gcgacttatt cgcaggcgta cccatcatta ccgatacatc
     1141 atcaacattt tcggactcac tcagctttcg agaaataatc attaagctga cagagtcctg
     1201 aaaacaccct tttttaataa aggcgtggat cataacaact ccttaataat tgcacccatt
     1261 gcaattgcac gagcagtgtt aatgtgcgct tcacggtata tatccgggag ggtaaataga
     1321 gtgattaacg tcacatcaaa tttattaaca aaagaattca aacaacggct aaaggattag
     1381 ttatgatttt ctaaaaaagc tttttattta agcaaaaaga taaaagccgc ctgattatca
     1441 aataaattct aattatattt ttttgcctgt ctggatcaca taatcatttt attttcccgg
     1501 tatgttaatc gcagtcatgc ttcacaccgt cgttaaaaag gaagacagat gaaaatcagt
     1561 cgggaaacac tccatcagct tatcgaaaat aagctttata aagccggact aaaacgtgag
     1621 cacgccgcca tcgtcgccga cgtactggtt tatgcagatg ccagaggtat tcactcacat
     1681 ggcgccgtac gcgttgaata ttatgccgaa cgaatttcaa aaggcggcac caaccgggag
     1741 ccgacgttcc gcattgagaa taccggtccc tgtacggcga tactgcatgc cgataatgct
     1801 gccggacagg tcgcagccaa aatgggaatg gagcatgcta ttgaaatagc caaaaaaaat
     1861 ggcgtcgcgg ttgtcggcat tagcagaatg ggccatagcg gcgccatctc ttatttcgtc
     1921 cgccaggccg ctcgcgaagg cctgattggt ctgtctatct gtcagtccga tcctatggtc
     1981 gtgccgtttg gcggggcgga tatttactat ggcactaatc cgctggcctt tgccgcgccg
     2041 agcgaaggcg atgacatcat tacctttgat atggccacca ccgtgcaggc ctggggaaaa
     2101 gtcctcgatg cacggtctcg caatgagtcc attccggaga gttgggccgt cgataaaaac
     2161 ggcgcgccga cacatgatcc ttttgccgtc aatgcgttat tacccgccgc aggcccgaaa
     2221 ggttacggcc tgatgatgat gatcgatatt ttgtccggca ttctgctggg gctgccgttt
     2281 ggtcgccagg tcagttcgat gtatgaagat ttacacgccg gacgcaattt aggacaactt
     2341 catctggtca ttaatccggc gttcttttct tcctgtgaat tattccgcaa acatattagt
     2401 cagactatgc aggaactcaa ttccgtgaag cccgctcccg gttttaaaca ggtttattat
     2461 cctggacagg atcaggatat taaacagaaa aatgccgata tgaatggtat cgatattgtt
     2521 gatgatattt atcaatatct gatttccgat gccctctatc tcaagtcata cgaaacaaaa
     2581 aatccctttg cccaataatt attgaaacag gaattttcta tgataaagca ttttcgccac
     2641 gcgatagaag aaacattgcc ctggctctct tccattggag ccgatcctac gggtggaatg
     2701 acgcgtttac tttattcgcc tgagtggctg gaaacacagc agcaatttaa aaagcgaatg
     2761 gcagaaagcg gtctggaaac acgctttgat gacgtcggaa atttatatgg ccgcctttgc
     2821 ggcacacaat ttccggagca ggtgatttta agcggttcgc atattgatac ggtcgtcaac
     2881 ggcggcaatc tggacggaca attcggcgcg cttgccgcct ggctggcgct cgactggcta
     2941 aaagcgacct acggcgcgcc gctgcgcacc gtcgaagtag tgtcaatggc agaggaagaa
     3001 ggcagccgtt tcccttacgt tttttggggc agcaagaaca tttttggcct ggcgaatcct
     3061 gaagaggtac gctatatcca ggacgccaaa ggcacaggcg ttgtcgacgc tatgcaggcg
     3121 tgcggattta cccttcccgc cgcgccgctc gctgcgcgaa ccgatatccg cgcctttgtt
     3181 gaattgcata ttgagcaagg ctgcgttctg gagagcaacg gacagtcgat tggcgtcgtc
     3241 aacgccatcg tcgggcaacg tcgctacacg gtgacgctca acggcgagtc caaccatgca
     3301 ggcacaacgc caatgggcta tcgtcgcgat acggtgcatg ccttcagtcg tatttgcagt
     3361 cagtccattg aaaaagccaa acagcatggc gatcccctgg tattaacgtt cggcaaagtt
     3421 gagccgcagc cgaatacggt caatgttgtc cctggaaaaa ccacatttac aatcgattgc
     3481 cggcatacgg acgccgcggt acttcgcgaa tttaccgaac agttggaaaa caatatgcgc
     3541 gccatctgcg atgaaatgga tatcagcatc gatatcgatt tgtggatgga cgaagcgccg
     3601 gtgccgatga acgccgaact ggtcgcggcc ctcaccaggc tgtgtgaaac cgaacaactg
     3661 aactatcgca taatgcatag cggcgcaggt catgacgcgc aaattttcgc gccgcgcgtc
     3721 cctacctgta tgattttcgt ccccagcatt aatggtatca gccataaccc ggcggaacgt
     3781 accaacatta atgaccttgc tgaaggggtc aaaactctgg cattaatgct tcatcaactt
     3841 gcctggcaaa aataaggagc catcaatggg atatctgaat aacgtcacgg gttaccgcga
     3901 tgatttactg gcgaaccgcg ccattgtgaa acacggtaac tatgcgctct taacgccgga
     3961 cggtctggtg aaaaatatta ttcccggctt tgaaaactgt gacgtcacca tcctttcgac
     4021 gccgaagctg ggtgcttctt tcgtcgatta cctggtcacc ttacatcaga atggcggcaa
     4081 ccagcagggc tttggcggcg aggggattga aacttttctc tatgtcattg cgggaaatat
     4141 tgaagctaaa gcagaaggaa aaacattctc tttaactcag ggcggctacc tctattgtcc
     4201 accgggggag atgatgacct ttagtaacgc tcaaacggaa gacagccagc tatttttata
     4261 taaacgccgc tatactcctg tcgaggggca tgccccgtgg ttggtttccg gcaatgccag
     4321 ccagctggag cgtattcatt atgaaggcat ggaagatgtt attctgctgg atttcctgcc
     4381 taaagagctg ggcttcgata tgaatatgca tattctgtcg ttcgaaccgg gcgccagcca
     4441 cggctatatt gaaacccacg tccaggaaca tggcgcttat atcctttccg gccagggggt
     4501 ttataacctc gacaacaact gggtgccggt gaaaaaaggc gactacatct tcatgggcgc
     4561 ttattccctg caggccggat acggtgtagg tcgtggcgaa gcattcagct acatctactc
     4621 caaagactgt aaccgcgacg ttatgattta acggcgggca gccctcctga ttatttttat
     4681 ttagctatgt tggattttgc cacggtgaga accgtggatt tttttatact taacgagtcc
     4741 cgatgtcctg gccaagtttg atgacgcggg caatattaca ggcgctgtgg tagagatttt
     4801 gttcaccgtt cgccagaacc tccggcaaag gcgccagccg cggcaaaata ctgaatactg
     4861 catcaatacc gtgacgatgg accacttcca cgccgtcgcc caatacgccg gcaatgccga
     4921 taaccgggac atgatgccgt ttcgccactg atgcgacgcc tatcggcgct tttcctcccg
     4981 ccgtttgcga gtcgattcgc ccttctccgg taatcaccag cgaggcctct tttaccgcct
     5041 cctccagctt caccgcctgc ataacaatct caataccggg cttcatttcc gcttccagga
     5101 agacgatagc ggcaatcccc attcctccgg ccgctccacc gcccggtatt tgagacatgt
     5161 cgcgtccggt cagggcatgt aaaatacggg cataattacg caatccattt tccagcgtct
     5221 cgaccatttc aggcgtcgcc cctttctgcg gaccgaatac cgccgccgcg ccgcgtggcc
     5281 ccaccaacgg gttatcaaca tcacaggcga cctcaatacg acactctgaa attcgcggat
     5341 cgcgcccctg caggtcaatg ctcgccaggc gcgataaatt gcccccttcg gcgccaagcg
     5401 gcgttcc
//
LOCUS       DAGWFR010000230         5391 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.233, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000230 DAGWFR010000000
VERSION     DAGWFR010000230.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 5391)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5391)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5391
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.233"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            152..2296
                     /gene="dinG"
                     /locus_tag="MOX77_004247"
                     /pseudo
     CDS             152..2296
                     /gene="dinG"
                     /locus_tag="MOX77_004247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459799.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase DinG"
     gene            2326..3300
                     /gene="ybiB"
                     /locus_tag="MOX77_004248"
                     /pseudo
     CDS             2326..3300
                     /gene="ybiB"
                     /locus_tag="MOX77_004248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459800.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein YbiB"
     gene            complement(3456..3716)
                     /locus_tag="MOX77_004249"
     CDS             complement(3456..3716)
                     /locus_tag="MOX77_004249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1471 domain-containing protein"
                     /protein_id="HCA3359637.1"
                     /translation="MKTIKYAVAAIALSTLSFGAFAAEPVSASQTQNLHKIGVVSADG
                     ATTLDGLEAKLAEKAAAAGASAYNITSAVGNDKMSGTAVIYK"
     gene            complement(4001..4267)
                     /locus_tag="MOX77_004250"
     CDS             complement(4001..4267)
                     /locus_tag="MOX77_004250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DksA/TraR family C4-type zinc finger protein"
                     /protein_id="HCA3359638.1"
                     /translation="MASGWANDDAVNEQINNTIEDAVARARGELPHGESRDECESCGD
                     PIPEARRKAVPGVRLCISCQQEKDLHNATFSGYNRRGSKDSQLR"
     gene            4472..5391
                     /gene="rlmF"
                     /locus_tag="MOX77_004251"
                     /pseudo
     CDS             4472..5391
                     /gene="rlmF"
                     /locus_tag="MOX77_004251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459803.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(1618)-N(6))-methyltransferase
                     RlmF"
BASE COUNT         1280 a         1357 c         1523 g         1231 t
ORIGIN      
        1 aaatacgtag gccgggtaag gtgcttgcac cgccatccgg caaaatacac atcgcgttgc
       61 gagccgcctt ccagaaccgg caaaaaaggt acttcccgcc cctgaaatgt gacacaatag
      121 tggctgttta tacagtactt caggttttct catggcattg accgctgcgc tgaaagcgca
      181 aatcgccgcc tggtataagg cgcttcagga tcagattccc gactttattc cccgtgcgcc
      241 gcagcggcag atgattgctg acgtcgccag aacgctggcc ggggaagaag ggagacatct
      301 ggctattgaa gcgccgaccg gcgtcgggaa aaccctctcc tatcttattc ccggtatcgc
      361 cattgcccgg gaagagcaaa aaacactggt ggtcagtacc gctaacgtgg cgttacagga
      421 tcagatcttt agcaaagatt tgccgctgct acgaaaaatc atccccgatc tgcgctttac
      481 cgccgccttt ggccgcgggc gttacgtgtg tccgcgaaac ctggcggcgc tcgccagtag
      541 cgagcctacg cagcaggatc tgctcgcctt tcttgatgac gaactgacgc ctaacaacca
      601 ggaagagcaa aagcgctgcg ccaggctgaa aggggatctt gacggttaca aatgggatgg
      661 tctgcgggat cataccgaca ttgctattga cgacgatctg tggcggcgat taagtaccga
      721 taaagccagt tgtctgaacc gcaactgtca ctattaccgc gaatgtccat tctttgtcgc
      781 ccgacgtgaa atacaggaag cggaagtcgt ggtggcgaat cacgcgctag taatggcggc
      841 gatggaaagt gaagccgtac tgccggaacc aaagcatctg ctgttggtac tggatgaagg
      901 tcatcatctg cccgatgtcg ctcgcgatgc gctggagatg agcgcggaaa ttaccgcctc
      961 ctggtatcgc ttgcaactgg acctgttcag caaactggtg gcgacctgca tggagcaatt
     1021 tcgccctaag accacgccgc cgttagcgaa tcctgagcga cttaacgccc attgcgagga
     1081 ggtgtacgaa ctgatcgcct cgctcaatgc cattcttaat ctgtatatgc ccgcagcgca
     1141 ggaggcggag caccgttttg caatgggcga gttgcctgat gaggtcatgg aaatctgcca
     1201 gcgactggcg aagctgaccg agacgttgcg tgggctggcg gagtcctttc tcaacgatct
     1261 cagcgaaaaa accgggtcgc acgatattgt gcgtttgcat cgggtgattt tacagatgaa
     1321 ccgggcgctg ggaatgttcg aggcgcaaag taaattatgg tgactggctt cgatggcgca
     1381 gtcttcaggc gcgccggtgt ccaaatgggc gacgcgtgaa atacgcgaag ggcaactcca
     1441 cgtctggttc cattgtgtcg gtatccgcgt cagcgagcag ctggaaagat tgttatggcg
     1501 cagcgtaccg cacattattg tcacctcggc gacactgcgc tcgctcaata gcttttcgcg
     1561 cctgcaggaa atgagcggct taaaagaaaa agccggcgac cgctttgtgg cgctggattc
     1621 gccgtttaat catgtggaac aggggaaact ggtgattcct caaatgcgct acgaacccac
     1681 tattgataac gaagagcagc atattgccga aatggcagcc tattttcgcg agcaactgga
     1741 gagcaaaaaa catcatggta tgctggtact gttcgccagc gggcgggcga tgcagcgttt
     1801 tctggagcat gtcgctgatg tgcgcttact cctcctggtc cagggcgacc agccgcgtta
     1861 ccggctggtg gagctgcacc gtaaacgggt ggagagcggc gaacgcagcg tgctggttgg
     1921 gcttcagtct tttgccgaag ggctggatct taaaggcgag ctactgacgc aggtccatat
     1981 ccataaaatt gccttcccgc cgatcgacag cccggtcgtg atcaccgaag gcgaatggct
     2041 aaaaagtctg aatcgttatc cgtttgaggt acaaagctta ccaagcgcgt cttttaattt
     2101 aattcagcag gtagggcgat tgatccgtag ccacgcctgt cggggagaag tggtcattta
     2161 tgataagcgg ttgttgacca aaaactacgg acagcgttta ctgaatgcct tacctgtttt
     2221 tccgatagag cagcctgccg tgccagacgt tatagtaaaa ccaaaagcaa aacctgcacg
     2281 ccgccgacgg tgttaatgct gtgagcacac ttcaaggagc tttcaatgga ttatcgcaag
     2341 atcatcaaag agatcgggcg aggtaaaaat cacgcccgcg atctggatct ggataccgcg
     2401 cgcggtttgt atacccgaat gctgaatggc gacgtccccg acctggaaat gggcagtata
     2461 ttgatggcgc tgcgtattaa aggcgaaggc gaagccgaaa tgctgggctt ttatgaagcc
     2521 atgtagaatc atgccatcaa actgacaccg cccgcagata ggccgttgcc ggtcgttatt
     2581 cccagctata acggcgcgcg taaacaggcg aatttaacgc cgctgctggc tatcttgctg
     2641 cataaattgg gctttccagt cgtagtacac ggcgtcagtg aagatccgac ccgcgtactg
     2701 acggaaacta tatttgagct gatggggatt gaacccaccc tacacggcgg acaagcgcag
     2761 gccaaactgg acgggcgcca gccggtgttt atcccggtga gcgcgctctg cccgccgctg
     2821 gaaaaacagc tagcgatgcg ctggcggatg ggcgtgcgta acagcgcgca ttcactggcc
     2881 aagctggcga cgccatttgc tgaggatgcc gcgctgcgtt tatcaagcgt ttctcatcct
     2941 gaatatgttc tgcgtgtggc gacctttttt agccgcattg gcgggtgggc tttgctgatg
     3001 catggtaccg aaggcgaagt ctatgccaac ccgcaacgct gtccgcaaat cagcctgatt
     3061 gatagccgcg gcgtgcaggt actgcatgag cgccagagcg acacgtacga cgagccgctt
     3121 tcactgcctg cgactaaaga tcctgaaatc accgcgcgct ggattgagcg ctgccttgcc
     3181 ggccacgagc cggtgccgca atcattaaaa acgcaaatgg cctgttgtct ggttgcgacg
     3241 ggagaggcgg cgacgttaga agacgggctt gcgcgcgtcg aacaggcttt tagcgaataa
     3301 aaaaagcccg tccagtggcg gacgggcaaa taagggtaac aaacagggtt aatgagggtt
     3361 ggagcagtgg gtctgttggc aaacagacga gggtaatacc cgtcagaatt caaacaacag
     3421 cgatgttaca gcctgaaatc tggcgggcag gtaaattatt tataaatcac cgcagtgccg
     3481 ctcattttgt cattacctac ggcggaggtg atgttataag cgcttgcgcc agcagcggcg
     3541 gctttttcag ccagtttagc ttccaggcca tccagcgtgg tggcgccatc ggcagacact
     3601 acgccgattt tatgcaggtt ttgcgtctga gacgcgctaa ccggttctgc ggcaaaagcg
     3661 ccaaaagaaa gggtggaaag cgcgatggct gcaacagcat atttaatggt tttcatgatt
     3721 aatctctcgc aggttattct gtttatggga cgatgttccg tcgatgtgat gagtatcacg
     3781 gttttttgcg aaagataaaa tcgaatagaa ttgacggcct tgctcaaaat ttttgaatga
     3841 caaataacct attgattatt aattaattca acggtggaat ttaccgttct tgtcatctgg
     3901 ctttacagag tcgaggttaa cggcacattc tgcgacgcag aacgctaaaa agcatgagcg
     3961 taaaggaatg gatgatactg gcggtttcgg taaagaaaag tcagcgtaac tgactgtctt
     4021 ttgaacctct acgattatat cctgaaaatg ttgcgttatg taaatctttc tcctgttggc
     4081 aggatatgca taaccgaacg cccggtacgg ctttacgccg cgcttcaggg ataggatcgc
     4141 cgcaagattc gcattcatcg cgactttcgc cgtggggaag ttcgccgcga gcgcgggcaa
     4201 cggcatcttc aatggtattg ttgatttgtt cattcactgc gtcgtcattt gcccagccgg
     4261 atgccatcac gctctcctga ttttagggta cctgaggtta agtgtagcgc cgtcaggtga
     4321 aaaaatcgca tcgcgcgatc ttttcagacc atgagcagag ccaatgtcat tcagagagcc
     4381 gataaaacga gcgaggcagg gaattcgcgg tggtatattt accccgtggc gttatacggg
     4441 tatcttacgc cgctgctaaa aggagaatgc catgtccgcc cagaaaccgg ggttacaccc
     4501 gcgcaaccgc catcaacacc gttatgatct cgccgcactg tgtcagacca cgccggaatt
     4561 gacgtcctta tcttatccgc acgcccgccg gtgaacagag cgttgatttt gctaatccgc
     4621 aagcggtaaa agcgctcaat aaggcgttgt tggcgcattt ttatgccgtt acacactggg
     4681 acattccgcc agggttttta tgtccgccag tgcctggtcg tgcggattat atccatcatc
     4741 tggcggatct gcttggcgaa acaacaggga gtattccggc gcaggcaact attctggacg
     4801 tgggcgccaa ttgtatttat ccgcttatcg gcgtccatga atatggctgg cgatttaccg
     4861 gtagtgaagt cagcgacgca gcgatgtcca gcgcgcaggc tatcattcag gctaatacgg
     4921 ggttaagccg cgccattcgt ctgcgtcggc aaaaagatcc ggcggccatt tttaccggta
     4981 ttattcataa aaatgaattt tatgacgcaa cgctttgtaa cccgcctttt cacgactccg
     5041 ccgccgcagc ccgcgcgggc agcgagcgta agcgccgcaa tttggggcag aataaagatg
     5101 atgcgctgaa ctttggcggt caacagcagg agctatggtg cgaaggcggc gaagtcgcct
     5161 ttattaaaaa aatgattgct gaaagccaaa ccttccgccg tcaggtgttg tggtttacga
     5221 cgttggtgtc gcgcggcgag aatttaccac cgctttaccg ggcgttgacg gaggctggcg
     5281 cggtgaaagt ggtgaaaaaa gagatggccc aggggcaaaa gcaaagccgc tttatcgcct
     5341 ggacctttat ggatgacgac cagcgtcgcc gttttatcac ccgtaaacgc t
//
LOCUS       DAGWFR010000231         5359 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.234, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000231 DAGWFR010000000
VERSION     DAGWFR010000231.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 5359)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5359)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5359
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.234"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..750
                     /gene="cobA"
                     /locus_tag="MOX77_004252"
     CDS             <1..750
                     /gene="cobA"
                     /locus_tag="MOX77_004252"
                     /EC_number="2.1.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HCA3359639.1"
                     /translation="SEPLDHRGEVVLVGAGPGDAGLLTLKGLQQIQQADIVVYDRLVS
                     DDIMNLVRRDADRVFVGKRAGYHCVPQEEINQILLREAQKGKRVVRLKGGDPFIFGRG
                     GEELETLCHAGIPFSVVPGITAASGCSAYSGIPLTHRDYAQSVRLVTGHLKTGGELDW
                     ENLAAEKQTLVFYMGLNQAATIQEKLIAFGMEANMPVALVENGTSVKQRVVHGVLTQL
                     GELAQQVESPALIIVGRVVALRDKLNWFSNH"
     gene            1086..5359
                     /locus_tag="MOX77_004253"
                     /pseudo
     CDS             1086..5359
                     /locus_tag="MOX77_004253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001169948.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter adhesin BigA"
BASE COUNT         1416 a         1425 c         1412 g         1106 t
ORIGIN      
        1 agcgagccgc tggatcaccg tggcgaagtc gtgctggtcg gcgccgggcc gggcgatgcc
       61 gggctgctta cgctgaaagg attacaacaa atccaacagg cggatatcgt ggtttacgat
      121 cgcctcgttt ccgacgacat tatgaacctg gtacgccgcg atgccgatcg ggtctttgtg
      181 gggaaacgcg cgggttacca ctgcgtccca caggaggaaa tcaaccagat cctgctgcgt
      241 gaagcgcaaa aaggtaaacg cgtggtacgc ctgaaaggcg gcgatccctt tatctttggt
      301 cgcggcggcg aagagctgga aacgctgtgt catgccggta ttcctttctc agtagtaccg
      361 gggattaccg cggcttccgg ctgctccgcc tactccggta ttccgctaac ccatcgcgat
      421 tacgcacaga gcgtacgtct ggtcacgggt cacctgaaaa ccggcggcga gctggactgg
      481 gaaaacctgg cggcagaaaa acagacgctg gtgttctaca tggggctgaa tcaggcagcg
      541 actatccagg aaaaactgat cgcattcggt atggaggcca atatgccggt tgcgctggtg
      601 gaaaacggta cctccgtaaa gcaacgcgtc gttcacggtg tgctgacgca gcttggtgaa
      661 ttagcgcaac aggttgaaag cccggcgctg attatcgttg gtcgcgtggt agccttacgc
      721 gataaattaa attggttctc taatcattaa ttaaaataaa gccctgttat tcagggcttt
      781 attttacaac tactcgtaat ctaaaattat ttttacttaa aattgaatta agcaatccat
      841 tttaaataca ccaaacgaat ttaaatagca attatattgc gtaaaaaccc tttcattcgt
      901 caaattcacc cgttattcat tcacccaata aataatatcg ttaagccttc aatttgacct
      961 gacctggtta tcgggtgata aaataaacac taaatcataa ttttcttctg gccatttcat
     1021 cattgcctgt atcgctatcc gcatatgttt agtacgcaag gaaatattaa ttaaggatga
     1081 actctatgca aaagaaaaaa cttatttcta tcgctatcgc tttaacgctg caaagttatt
     1141 acattccggc catcgccgca gagaataacg atgatgaaaa agaatgtccc agtaatatcg
     1201 cctccctgcc taaagaaaaa cgcgcaaaac tctcaccgac ctgccttgct acattacctg
     1261 aaaatgataa tcactggggc tgggttgctg gcggcgttgc cgcattggtc gcgggtgtgg
     1321 ttattggcgt tgaaaataac ggtggcggag attctactca ttcttatatt ccccctacgc
     1381 ccgacgatgg cggcaatgtc accccgcccg acgatagcgg cgatgacgat gtaaccccgc
     1441 ccgacgatag cggcgatgac gatgtgaccc cgcccgatga cgacgacacg cccccggatg
     1501 actctgttat aaccttcagc aacggcgtca ccatcgataa aggcaaagac accctggcct
     1561 tcgatagctt caaactggat agcggcagcg ttctcgaggg tgccgtgtgg aattattcag
     1621 aacagaacaa ccagtggcag ctcacccccc tgggcggcaa aacgctgaac gtcaccggtt
     1681 gggacgtgac cgacgctaat gccgccgtga ttgaaggcac ccaggaaaat ggtctctact
     1741 ggaagtatga cagccggggc tatctgatcc ttgccgacga taaaaccacc gttatcagcg
     1801 gcgacggcga atcgcatacc tccgatcgcg gcatggatat cagcggccag gatcgcaccg
     1861 gcgtgattat ttccggcaat cgaaccgtca acacgctcac cgggggttcc agtgtgaccg
     1921 acggcgccat cggcatggtg atcactggcg atggcaccac caacaccatt tcgggccact
     1981 caacggtgga caacgccacc ggcgcgctga tttccggcaa cggaaccacc accaatttcg
     2041 ccggtgacat tgccgtgagc ggcggcggca ccgccatcat catcgacggc gacaacgcca
     2101 cgattaagaa tactggtacc tccaccatca acggcacagg ctccaccggc accgtcattg
     2161 acggcaataa cgcccgcgtc aacaatgacg gtgatatgac catcaccgat ggcggcaccg
     2221 gtgctcacat caccggcgat aacgcggtta tcgataacgc cggggacacc accgtcagcg
     2281 gcacgggctc aacggcgctg tatatcgacg gcgacaatgc gctcattatc aatgaaggta
     2341 atcagactat ttccggcggc gccattggta cgcgaattga cggcgacgac gcccgtatcg
     2401 ccaataccgg cgatatcgcc gttgatggcg caggctctgc ggcggcgatt attaatggcg
     2461 acaatagcag cctgacccag gcgggcgatc tgctggtcac cgacggcgcg atgggcatca
     2521 tcacctacgg cgccggaaat gaagccaaaa ataccggcaa cgccaccgtg cgtgatgtag
     2581 actcagtggg gtttgtggtc gcaggcgaac aaaacacctt caaaaacaag gggaatatta
     2641 acatcagcct taacggcacc ggcgcgctgg taagcggcaa tgcgtcgcaa gcgacgctgg
     2701 atggcgatat taatgtcacc gcaacagagg acggggataa cgtttatcgt ggcgcgacgg
     2761 gcctcgacat gacggggaat aacaacacgc tgaatattat cggcagcgtc acggtcaacg
     2821 gcgactatga caaagacagc gtgatggccg gcagcagcga tacccttatg gggatgtcta
     2881 tcagcggcag caataatgcg gtggacctga gcggcacgct caatattaac gtcagcgata
     2941 tgagtaacgt ggacgaacaa tatctgaata ccgttggcct tgatgtggca ggtgatggca
     3001 ataccgtgga cttagccggc ggtattaata tcaactacac cgaagatgct gacggcctcg
     3061 aatcagccgt taccagtata aacatcagcg gagacagtag cgtaacgcta agcggtgaat
     3121 ccacgctcaa tattgccacc gtccccggcg gcgcggtgac gctggcgaat gtgagaaatg
     3181 gcggcaactt aacgttagat caaaactcaa cggttaatat caatgaaacg gttattcttt
     3241 ctaattatta catgacgcag gccctgttaa ccgccagcgg cgagggctcc tcaatcaata
     3301 atcagggcac tgtcgttgac gatggcgccg tcgctttatt actggcggat agcggcgcac
     3361 aggcacaaaa cagcggcaag attaccgcgt atgccacaac agggacgtcc agccgtaatg
     3421 cgatagccgc ggctaacggc cagggttcca ccgttaataa tgaagcggaa gggacaatca
     3481 ccttagtttc atcattaact ccgttttcaa ataccggcgc gggcaacttc ccactaatct
     3541 ggtacaaaaa taccctgtac gccatgctgg cagaggacta cggcgaggtg agtaacgacg
     3601 ccggcgccac catatatttg cagggcgcag gggtatacgg cgtatccgcc agcaaaggca
     3661 cggcgctcaa cgctggtgat atctacctgg acggctttgt cccgacgctg gatgatgaaa
     3721 ataacatcac cgacaaaact tactggacgc caccgaaact ttatgtcacc agcgccgcga
     3781 tggtcgcagg caccaccgac agcggttatg gcgatgccac cgccaccaac accggcacca
     3841 ttaacgtcaa taacgccggg ttcggcatga tggcgcttaa cggcggtacc gccattaacc
     3901 agggggtaat taatctaacc gctgatgcgg gcgttgaagg gaccgacccg aatcaactgg
     3961 taggcatggc ggcgctcaac ggcggaaccg ttgtcaacga taccacaggc aaaatcaata
     4021 tttatgccga ttacggcaag cctttcctga ccgacggcaa tagcctgatt gttaactacg
     4081 gcaccgtctg ttttggcgac gattgccagg acagcgacga gtacaatcca acaaacagtg
     4141 acgtttctat cccttacaca gacggcgcta cgattgccga tgccggaaca agtacaacgc
     4201 ttggtaataa agcgattgtg acaggagacg ttaataatac cggagtggtc agcggcgagt
     4261 ccattaccgt cctggatagc ggcacgctga ccaacaacga cagcggcgtt atcaatagca
     4321 acaccacggt atccggcaac cttgtcaatg acggcgtcat aaacggtgcg ctgacgcaaa
     4381 atggcggcga tatcgttaat aatggcacca ttgacagccg tagcctgacg accaacggcg
     4441 tattaactaa cgcacggatg gcaccatggc ttccggcgca aaagtgactg gcgctaacag
     4501 tgcaatcatt aacgacggta cgttctatct tggctccgcg actgacgcta aaaatgcgtc
     4561 catgctggaa atcaatgatt tcgcgcaatt ctttaatacc ggtacgttaa tccttgataa
     4621 caacaaaaat gtcattcacc tgaatgcgaa taacggaacg ctgtacaaca ccgggacgat
     4681 ggagcttacg gcaacctcca ataagggcgc gattaactat tggggcgcgg gagcggcatt
     4741 tatcaatgac ggtacggtaa atgccactac tgcggtgctt gcttatgcgg ggggcggcgc
     4801 aggtaatgcc ccggataaac acgctttctt ctggaaccag tcaaacggcg taatcaatta
     4861 cgatgcggat aatggccgcg ccgtcgattt ctccgcctat aacaattacg tagcggtcaa
     4921 cgacggcacc atgaatatca gcggtaataa cgcttacggc atgtatggcg gcaaaaatgc
     4981 acaactggtc aataacaata cgatcaattt aggtacagaa ggcaccaccg acacaggcat
     5041 ggtcgcgatg gcgctggata aaaatgctac cgctaatgct gtcattgaga acaacggtac
     5101 aattaatatt tacgccaata actcttacgc gtttagcgtg gcgggtgcgg ggcatgtggt
     5161 taataacggg acggtagtca ttgccgatgg cgtaacgggt tccggtatta ttaaacaggg
     5221 tgacagcgtt aacgtcgaag ggacaaacgg taataacggc aacagcgacg aggcgcatta
     5281 tgccgactat acgttgccgg aaacgcctgt tgaacccggc agcaacacga cctccggctt
     5341 cgccgccggc gacacgtcc
//
LOCUS       DAGWFR010000232         5346 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.235, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000232 DAGWFR010000000
VERSION     DAGWFR010000232.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 5346)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5346)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5346
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.235"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..1360)
                     /gene="pcnB"
                     /locus_tag="MOX77_004254"
     CDS             complement(<1..1360)
                     /gene="pcnB"
                     /locus_tag="MOX77_004254"
                     /EC_number="2.7.7.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polynucleotide adenylyltransferase PcnB"
                     /protein_id="HCA3359640.1"
                     /translation="MTLPRCAIFTRVANFCRKVLSREESEAEQAVARPHMTIIPREQH
                     AISRKDISENALKVLYRLNKAGYEAYLVGGGVRDLLLGKKPKDFDVTTNATPDQVRKL
                     FRNCRLVGRRFRLAHVMFGPEIIEVATFRGHNEGSESDRTTSQRGQNGMLLRDNIFGS
                     IEEDAQRRDFTINSLYYSVADFTVRDYVGGMQDLQEGVIRLIGNPETRYREDPVRMLR
                     AVRFAAKLNMRISPETAEPIPRLATLLNDIPPARLFEESLKLLQAGNGFETYQQLREY
                     HLFQPLFPTITRYFTENGDSAMERIIAQVLKNTDNRIRNEMRVNPAFLFAAMFWYPLL
                     EMAQKIAQESGLAYYDAFALAMNDVLDEACRSLAIPKRLTTLTRDIWQLQLRMSRRQG
                     KRAWKLMEHPKFRAAFDLLELRAQVENNTELQRLAQWWAEFQASAPPEQKGMLNELDD
                     DPA"
     gene            complement(1501..2397)
                     /gene="gluQRS"
                     /locus_tag="MOX77_004255"
     CDS             complement(1501..2397)
                     /gene="gluQRS"
                     /locus_tag="MOX77_004255"
                     /EC_number="6.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001549989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA glutamyl-Q(34) synthetase GluQRS"
                     /protein_id="HCA3359641.1"
                     /translation="MTDSHYIGRFAPSPSGELHFGSLIAALGSYLQARAQRGVWRVRI
                     EDIDPPREVPGAAATILRQLEHYGLHWDGEVLWQSQRHEAYREALAWLHEQGLSYYCT
                     CPRSRIQRLGGIYDGHCRTLCHGPENAAVRIKQQHPVMHFHDALRGDIQADPQLASED
                     FIIHRRDGLFAYNLAVVVDDHFQGVTEIVRGADLIEPTVRQLSLYKQFGWRAPGYVHL
                     PLALNEQGAKLSKQNHAPALATGDPRPVLVQALRFLGQRDVVAWQEMSVEELLRFAVA
                     HWRLTAVPTSANVNPAFSNASR"
     gene            complement(2466..2921)
                     /gene="dksA"
                     /locus_tag="MOX77_004256"
     CDS             complement(2466..2921)
                     /gene="dksA"
                     /locus_tag="MOX77_004256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002209354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding protein DksA"
                     /protein_id="HCA3359642.1"
                     /translation="MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLSHFKRIL
                     EAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKT
                     LKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQMAG"
     gene            complement(3098..3802)
                     /gene="sfsA"
                     /locus_tag="MOX77_004257"
     CDS             complement(3098..3802)
                     /gene="sfsA"
                     /locus_tag="MOX77_004257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA nuclease SfsA"
                     /protein_id="HCA3359643.1"
                     /translation="MLFSPPLQRATLIQRYKRFLADVITPDGTTLTLHCPNTGAMTGC
                     ATPGDTVWYSTSENTKRKYPHTWELTETQSGAFICVNTLRANQLTKEAIQENRLPALA
                     GYNILNSEVKYGAERSRIDFMLQADFRPDCYIEVKSVTLAEKENGYFPDAITERGQKH
                     LRELMGVAAAGHRAVVVFAVLHSAITRFSPARHIDIKYAQLLSEAQNKGVEVLAYKAE
                     LSATKMELNEPVPITL"
     gene            complement(3819..4349)
                     /gene="thpR"
                     /locus_tag="MOX77_004258"
     CDS             complement(3819..4349)
                     /gene="thpR"
                     /locus_tag="MOX77_004258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 2',3'-cyclic phosphodiesterase"
                     /protein_id="HCA3359644.1"
                     /translation="MSEPKRLFFAIDLPDDARAQIIAWRAAHFASEDGRPVAAANLHL
                     TLAFLGDVSNDKQRALAQLAGRIRQPGFTLHLDDAGQWLRSRVVWLGMRQPPRGLLQL
                     ANMLRAQAARSGCYQSPQPFHPHITLLRDASHTVAIPPPGFCWSFPVTSFALYASSYG
                     QGRTRYAELQRWTLGE"
     gene            4422..>5346
                     /locus_tag="MOX77_004259"
     CDS             4422..>5346
                     /locus_tag="MOX77_004259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HCA3359645.1"
                     /translation="MTSLPVAAVLPELLTALKTAPQVLLSAPTGAGKSTWLPLQLLQQ
                     GPVAGKILLLEPRRLAARNVAQRLAEALNEKPGETVGYRMRAQSCVGPRTRLEVVTEG
                     VLTRMIQRDPELRGVGLVILDEFHERSLQADLALALLLDIQQGLRDDLRLLIMSATLD
                     NDRLCQRLPDAPTIVSEGRAFPVERRYQPLAAHLRFDEAVAMATAELLRNENGSLLLF
                     LPGVGEIQRVHEHLASRVGSDVLLCPLYGALSLEAQRKAIVPAPAGMRKVVLATNIAE
                     TSLTIEGIRLVVDSAQERVARFDARTGLTRLV"
BASE COUNT         1180 a         1444 c         1513 g         1209 t
ORIGIN      
        1 gagcaggatc gtcgtccagc tcgttgagca tccctttttg ttccggcggc gcggaagcct
       61 gaaactcggc ccaccactgc gccagacgtt gcagttcagt attattttcc acttgggcgc
      121 gcagctccag caaatcaaac gcggcgcgga atttgggatg ttccatcagc ttccaggcgc
      181 gtttgccctg gcgtcgcgac atgcgtaact gaagctgcca aatatcacgg gtaagcgtgg
      241 taaggcgttt cgggatcgcc agtgaacggc aggcttcatc cagcacgtca ttcatggcca
      301 gcgcgaaagc atcgtaatag gcaaggccgc tctcctgagc gattttttgc gccatctcca
      361 gcagcggata ccagaacatg gcggcaaaca aaaatgccgg gttaacgcgc atctcgttac
      421 ggatgcggtt atccgtattc ttcaacacct gcgcaatgat gcgttccatt gcgctgtcgc
      481 cgttttcggt gaaataacgc gtaatggtag gaaacaacgg ctggaagagg tggtattccc
      541 gcagttgttg ataggtttca aaaccgttcc ccgcctgcaa cagcttcagc gattcttcga
      601 acaggcgcgc gggaggaatg tcgtttagca aggttgccag acgcgggatt ggctcagccg
      661 tttcagggct gatacgcata ttgagcttcg cagcgaaacg cacggcgcgc agcattcgaa
      721 ccggatcttc gcggtagcgc gtttccggat tgccgatcag gcgaatcacg ccttcttgca
      781 gatcctgcat cccgccgacg taatcgcgca cggtaaaatc cgccacgctg tagtaaaggc
      841 tgttgatggt gaaatcgcgg cgctgggcat cttcttcgat agagccgaag atgttgtcgc
      901 gcagcagcat accgttttgc ccacgctggg aggtcgtacg gtcgctttca ctgccttcat
      961 tatgaccacg aaacgttgcc acttcgataa tttccgggcc aaacatcacg tgagccaggc
     1021 ggaaacgacg ccccaccaga cggcaattgc ggaataattt ccgtacctga tccggtgttg
     1081 cgttggtggt cacatcgaaa tccttcggct ttttaccgag caggagatcg cggacgccgc
     1141 cgccgaccag gtaggcttca tagcccgctt tgttcagcct gtacagtacc ttgagggcat
     1201 tttcactgat atctttgcgg gagatagcgt gctgttcacg cgggataatc gtcatatgtg
     1261 gacgggcgac ggcttgttct gcctcgctct cctcgcggct taacacctta cggcaaaaat
     1321 tagcgactcg ggtaaaaata gcgcacctcg gtagtgtcat acattaataa gatcaactta
     1381 ctctatgtct ttcgcattac ggcagacggg cgtaagagag caacgcgacc tgggctgtaa
     1441 gcatcattaa cgccgcagca atgcgaaaga cgatgagcaa aaatagcggc taatcatagc
     1501 tcagcgagac gcatttgaga atgccggatt tacattagcc gatgtgggta cggctgtaag
     1561 cctccagtgc gccaccgcaa agcgcagcaa ctcctcaaca gacatctcct gccacgctac
     1621 gacgtcgcgt tggcctaaaa agcgcaatgc ctggaccagt accgggcgcg gatcgcctgt
     1681 cgcaagcgca ggggcatgat tttgcttgga aagtttagcg ccttgttcgt tgagcgccag
     1741 cggaaggtgc acgtaacctg gcgcacgcca gccaaactgt ttatacagcg aaagttgtcg
     1801 gacagtaggt tcgattaaat ctgcgccgcg gacgatctcc gtcaccccct gaaaatgatc
     1861 gtcgaccacc acggccaggt tataagcaaa cagtccgtcg cggcggtgga taataaaatc
     1921 ttcgctagcc agctgtgggt cagcctggat gtcgccgcgc aaggcatcat ggaaatgcat
     1981 cactggatgc tgctgtttaa ttctgacggc ggcattctcc ggcccgtggc ataacgtccg
     2041 gcaatggcca tcgtaaatac cgcccagacg ttgaatgcgc gagcgggggc aagtgcagta
     2101 gtagctcagt ccctgctcgt gaagccaggc cagcgcctcg cgataagcct catgacgctg
     2161 tgattgccat aagacctcgc catcccagtg caggccgtaa tgttccagct ggcgcagaat
     2221 ggtcgctgcg gcaccgggaa cttcacgtgg ggggtcgata tcctctatgc gaacgcgcca
     2281 aactccgcgt tgcgcacggg cttgtagata gctgccgagg gcggcgatta acgagccgaa
     2341 atgcagttcg ccggatggcg acggcgcgaa acggccaata tagtgtgagt cagtcatgct
     2401 gcgggcaata aagaataagg cgggaaaact cccgcctgtc ataaataggg tagaaacgaa
     2461 cgggattaac ccgccatctg tttttcgcga atttcagcca gcgttttgca gtcgatgcac
     2521 agatcggctg ttggacgcgc ttccaggcgg cggataccaa tctccactcc gcaggactcg
     2581 caataaccga agtcttcatc ttccactttc ttcagcgttt tctcgatctt tttgatcagt
     2641 ttgcgctcac ggtcacgatt acgtaactcc aggctaaact cctcttcctg cgcggcgcga
     2701 tcgaccggat cggggaagtt ggcggcttcg tcctgcatgt gcgtcacagt gcgatcgact
     2761 tcatcccgga gttgattacg ccatgcttca agaatacgct tgaagtgcga tagctgggct
     2821 tcgttcatat actcttcgcc cggtttctcc tggtacggct ccaccccagc gatggcgaga
     2881 atactcaggg acgatgtttt acggttttgc ccttcttgca tgttgcttct ccttaacacg
     2941 cactatcgat ccccatgttc gggggaaaat caggtcgcta taaatagcag atgcttttcc
     3001 ggatagcaat tatctaaacg taacacttga caaccctgtg aggaaaagcg tatttacgca
     3061 cgcggccaga atacttaata atcaggctgt tattccacta caacgttatg ggcactggtt
     3121 cgttcagttc catttttgtg gctgaaagtt ctgctttata agctaaaact tccacgcctt
     3181 tattctgagc ctcgctcaat agctgcgcgt attttatatc gatatgacgt gcgggggaaa
     3241 aacgtgtaat ggcggagtgc agcacagcga acaccaccac cgcgcgatga cctgccgccg
     3301 caacgcccat caactcccga agatgttttt gccctcgttc ggtgatggcg tcgggaaaat
     3361 aaccgttttc tttttccgct aacgtgaccg atttcacttc aatatagcag tccgggcgga
     3421 aatctgcctg taacataaaa tctatacggc tgcgctcggc gccatatttg acttcactat
     3481 tcagaatatt gtaccccgcc agcgccggca ggcgattctc ctgaatcgct tctttcgtta
     3541 gctggttcgc ccgcagcgta ttcacgcaaa tgaatgcgcc ggattgcgtt tcagtcaatt
     3601 cccaggtatg cggatatttg cgtttagtat tttctgatgt cgaataccag acggtatcgc
     3661 caggcgtggc gcagccagtc atcgcgccgg tattaggaca gtgcagcgta agcgtcgtac
     3721 cgtcaggggt gatgacatca gctaaaaaac gtttatagcg ctgaatcaac gtagcgcgtt
     3781 gtaaaggggg tgagaatagc atcgacattc cttgattatt attcgcccag cgtccagcgc
     3841 tgcagctcgg catagcgggt acggccttgc ccatacgaag aggcgtaaag cgcaaacgat
     3901 gtgaccggaa atgaccagca aaagcccggc ggcgggatag ccaccgtatg gctggcgtcg
     3961 cgcagcagcg taatatgcgg gtgaaaaggc tgcgggcttt ggtaacaacc gctgcgggcg
     4021 gcctgcgcgc gcagcatatt agccaactgc aacaacccgc gcggcggctg gcgcattccc
     4081 agccacacaa cgcgcgaacg caaccactga ccggcgtcat ctagatgtag cgtaaagccc
     4141 ggttggcgaa ttcgtccggc cagttgcgca agcgcgcgct gcttatcgtt actgacgtcg
     4201 cctaaaaagg ccagcgtcag gtgtaggttc gccgctgcca cggggcgtcc gtcttcagac
     4261 gcaaaatggg cggcgcgcca ggcgataatt tgcgcgcgcg cgtcgtcggg taagtcaata
     4321 gcaaaaaaca gccgttttgg ctcagacata gggatactcg gttatggatt aacacgatgc
     4381 tacaatgcgg cgcaaagaaa gttaaccccg tggagccgtt tgtgacgtca ttgcccgttg
     4441 ccgccgtatt gcctgaattg ttgacagccc taaaaaccgc gccgcaggtt ttgttgtccg
     4501 cgcctaccgg ggcggggaaa tccacctggc tgccgttgca actcctgcaa caggggccgg
     4561 ttgctggaaa aattctcctg cttgaaccgc gtcgtctggc ggcgcgtaat gtcgcccagc
     4621 gtctggcgga agcgttgaat gaaaagcctg gcgaaacggt aggttaccgg atgcgcgcgc
     4681 aaagctgcgt ggggccgcgt acccggctgg aagtggtgac cgaaggcgta ttgaccagaa
     4741 tgattcagcg cgatcccgaa ttacgcggcg tggggctggt gatactggat gaatttcatg
     4801 agcgcagttt acaggcggat ttagcgttgg cgctgttgct ggatatccag caagggctcc
     4861 gtgacgatct caggctgtta atcatgtctg cgacgctgga taacgacagg ctttgtcagc
     4921 gactgcctga tgcgccgacg atcgtctcgg aggggcgcgc gtttcccgtg gagcgacgtt
     4981 atcagccgct tgcggcgcat ttgcgttttg atgaagccgt cgcgatggcg acagcggaac
     5041 tgctgcgcaa tgaaaacggt tcgctgctgc tatttttacc cggcgtaggc gaaatacagc
     5101 gcgttcatga acatctggcg tcgcgggtag ggagcgatgt cctgctttgt ccgctgtatg
     5161 gcgcattgtc tctggaagcg caacgcaaag cgattgttcc cgcacccgcc gggatgcgta
     5221 aagtggtatt ggcgactaac attgccgaaa ccagtttgac gattgaaggg attcgtctgg
     5281 tcgtcgatag cgctcaggag cgcgtggcgc gattcgacgc gcgaacggga ctgacgcggc
     5341 tggtta
//
LOCUS       DAGWFR010000233         5301 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.236, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000233 DAGWFR010000000
VERSION     DAGWFR010000233.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 5301)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5301)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5301
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.236"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..422
                     /locus_tag="MOX77_004260"
     CDS             <1..422
                     /locus_tag="MOX77_004260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HCA3359646.1"
                     /translation="PRDGRVQYRVAEPGEVLSAGGRVLNMVDLSDVYMTFFLPTEQAG
                     LLKIGGDARLVLDAAPDLRIPATISFVASVAQFTPKTVETHDERLKLMFRVKARIPPE
                     LLRQHLEYVKTGLPGMAWVRLDERVPWPDDLNVRLSQ"
     gene            419..3160
                     /gene="rbbA"
                     /locus_tag="MOX77_004261"
     CDS             419..3160
                     /gene="rbbA"
                     /locus_tag="MOX77_004261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated ATPase/putative transporter
                     RbbA"
                     /protein_id="HCA3359647.1"
                     /translation="MTSLTLVPVPPVAQLEGVSQHYGKTVALNNITLDIPARSMVGLI
                     GPDGVGKSSLLSLISGARVIEQGNVIVLGGDMRDAKHRRDVCPRIAWMPQGLGKNLYH
                     TLSVYENVDFFARLFGHDKAEREARITELLNSTGLAPFRDRPAGKLSGGMKQKLGLCC
                     ALIHDPELLILDEPTTGVDSLSRAQFWDLIDSIRQRQTNMSVLVATAYMEEAERFDWL
                     VAMNAGEILATGSAQQLRAKTHSATLEQAFIALLPEAQRQAHKPVVIPPYHAEQEEIA
                     IEAKDLTMRFGKFVAVDHVNFRIPRGEIFGFLGSNGCGKSTTMKMLTGLLPASEGQAW
                     LFGQPVDPNDIDTRRRVGYMSQAFSLYNELTVRQNLELHARLFHIPPAEIPARVAQMI
                     ERFMLTEVEDTLPASLPLGIRQRLSLAVAVIHRPEMLILDEPTSGVDPVARDMFWQLM
                     VDLSRQDKVTIFISTHFMNEAERCDRMSLMHAGKVLASGTPQELVQQRGAANLEAAFI
                     SWLQEAAGAAPETPIPPSQTPAASDKPSRQGLSFRRLFSYSRREALELRRDPVRSTLA
                     LLGTVILMLIMGYGISMDVENLRFAVLDRDQTVSSQAWSLNLAGSRYFIEQPPLASYD
                     ELDRRMRSGELAVAIEIPPNFGRDIARGTPAQIGVWVDGAMPSRAETVKGYVQAMHQS
                     WLQEAASRQPNPVKQTGLLNIETRYRYNPDVKSLPAIVPAVIPLLLMMIPSMLSALSV
                     VREKELGPMINLYVTPTTRSEFLLGKQLPYIALGMLNFLLLCALSVFVFGVPLKGSFL
                     TLTLAALLYVIIATGLGLLISTFMKSQIAAIFGTSIITLIPATQFSGMIDPVASLEGP
                     GRWIGEIYPTSHFLTIARGTFSKALDLSDLWSLFMPLLIAVPVVMGLSILLLKKQEG"
     gene            3160..4279
                     /locus_tag="MOX77_004262"
                     /pseudo
     CDS             3160..4279
                     /locus_tag="MOX77_004262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462486.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
     gene            complement(4384..4785)
                     /gene="nikR"
                     /locus_tag="MOX77_004263"
     CDS             complement(4384..4785)
                     /gene="nikR"
                     /locus_tag="MOX77_004263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel-responsive transcriptional regulator
                     NikR"
                     /protein_id="HCA3359648.1"
                     /translation="MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRGALAQEA
                     TQEHGTQGFAVLSYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLK
                     GDMGDVQHFADDVIAQRGVRHGHLQCLPKED"
     gene            complement(4876..>5301)
                     /gene="acpT"
                     /locus_tag="MOX77_004264"
     CDS             complement(4876..>5301)
                     /gene="acpT"
                     /locus_tag="MOX77_004264"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4'-phosphopantetheinyl transferase AcpT"
                     /protein_id="HCA3359649.1"
                     /translation="VYGEQGKPAFSAGTPLWFNLSHSGDTIALLLSDEGEVGCDIEVI
                     RPRDNWRSLANAVFSLGEHAEMEAERPERQLAAFWRIWTRKEAIVKQRGGSAWQIVSV
                     DSTLPSALSVSQCQLDTLSLAVCTPTPFTLTPQTITKAL"
BASE COUNT         1044 a         1428 c         1604 g         1225 t
ORIGIN      
        1 cgccgcgcga tggacgtgtg cagtaccgcg ttgcggagcc gggcgaagtg ttatcggctg
       61 gcggccgggt gttgaacatg gtcgatctca gcgatgttta tatgacattt ttcctgccga
      121 ccgaacaggc ggggttgttg aagatcggcg gcgacgcgcg actggtgctg gacgccgcgc
      181 cggatctgcg tattccggcg accatcagtt ttgtcgccag cgtggcgcag ttcacaccca
      241 aaaccgtgga aacccacgat gaacggctga agctgatgtt ccgcgtcaaa gcgcgtattc
      301 cgccagagct gctgcgacag catctggaat atgtcaaaac cggtttgccg ggaatggcct
      361 gggttcgtct ggatgagcgc gtgccctggc ctgacgatct gaacgtgagg ttgtcgcaat
      421 gacgtcgctg acgctggtgc ctgttcctcc cgtggcgcag cttgaggggg tgagccagca
      481 ttacggaaaa acggtcgcgc tgaacaatat cacgctggac attcccgccc gtagtatggt
      541 cgggctgatt ggtccggacg gggtgggtaa gtcgagcctg ctgtcgctga tttctggcgc
      601 gcgggtgatt gagcaaggga acgttatcgt cctgggcggc gatatgcgcg atgcgaaaca
      661 tcgccgcgac gtctgtccgc gcatcgcctg gatgccgcag gggctgggga aaaaccttta
      721 tcacacgcta tcggtttatg agaacgtcga ttttttcgct cgtctctttg gtcatgacaa
      781 agctgaacgc gaagcgcgta ttaccgagct gctgaacagc accggcctgg cgccgtttcg
      841 tgatcgtcct gccgggaagc tgtccggtgg gatgaaacaa aagctggggc tgtgctgtgc
      901 gctgattcat gacccggaat tactgattct tgatgagcct accaccggcg tggactcgct
      961 ctcccgcgct cagttctggg acttaatcga cagtatccgc caacggcaga ccaatatgag
     1021 cgtgttggtc gcaacggcct atatggaaga ggcggagcgt tttgactggc tggtggcgat
     1081 gaatgcgggc gagatactgg caaccggcag cgcgcagcaa ctgcgggcaa aaacccatag
     1141 cgcgacgctg gagcaggcgt ttatcgccct gttgccagaa gcgcagcgcc aggcgcataa
     1201 gccagtggtg atcccgccgt atcacgctga gcaggaagag attgccattg aggcgaaaga
     1261 tctgaccatg cgcttcggta agttcgtcgc ggttgaccat gttaatttcc gcattccgcg
     1321 cggcgagatt tttggcttcc tcggttcaaa cggctgcggc aaatcgacca ccatgaaaat
     1381 gctgaccggt ctgcttcccg ccagcgaagg ccaagcctgg ctatttggcc agccggtaga
     1441 cccgaacgac atcgataccc gtcgccgggt cgggtatatg tcgcaggctt tttcgctcta
     1501 taacgaactc accgtgcggc agaatctgga acttcatgcc cgcctgtttc atattccgcc
     1561 agcggagatc ccggcgcgcg ttgcgcagat gatcgaacgc tttatgctaa cggaggtgga
     1621 agatacgctc cccgcttcgt tgccgctcgg tatccgccag cgtttatcgt tggcggtagc
     1681 ggtgatccat cgcccggaaa tgctgattct tgatgagcca acgtccggcg ttgatccggt
     1741 cgccagggat atgttctggc agcttatggt cgatctttcg cgtcaggata aagtgacgat
     1801 ttttatctcg acccatttta tgaacgaagc ggaacgttgc gaccgaatgt cattgatgca
     1861 cgccggtaaa gtgctcgcca gcggtacgcc gcaggaattg gtgcaacagc ggggcgcggc
     1921 caatctggaa gcggcgttta tttcctggct acaggaagct gcgggagcgg cgcctgaaac
     1981 cccaataccg ccatcccaga cgcccgccgc gtcagataaa ccgtcgcggc agggattgag
     2041 cttccggcgt ttgttcagct acagtcgccg cgaagcgctg gagctacgcc gcgatccggt
     2101 acgctcgacg ctggcgctgc tgggaacggt aattctgatg ctgattatgg gctatggcat
     2161 cagtatggac gtggagaacc tgcgttttgc cgtactcgac cgcgatcaaa ccgtcagcag
     2221 ccaggcatgg tcgctcaatc tggcgggatc gcgctatttt atcgaacagc cgccgctcgc
     2281 cagctatgac gagcttgacc ggcggatgcg ttcgggagag ttggcggttg ccattgagat
     2341 cccgcctaat tttggccgcg atattgctcg cggtacgcca gcgcagattg gcgtctgggt
     2401 ggatggcgcc atgcccagcc gcgccgagac ggtgaagggg tacgttcagg cgatgcacca
     2461 aagctggctg caggaggcgg caagtcgtca gccgaacccg gttaaacaaa ccgggctgct
     2521 caacattgaa acgcgctatc gctataaccc ggatgtgaaa agtctgcccg ctatcgttcc
     2581 ggcggtcatt ccgctgctgc tcatgatgat cccgtcaatg cttagcgccc tgagcgtggt
     2641 gcgggagaaa gagctggggc cgatgattaa tctgtacgta acgccgacga cgcgcagtga
     2701 atttttgctg ggtaaacaac tgccgtatat cgcgctgggt atgctgaact tcttgctact
     2761 gtgcgcgctg tcggtctttg tgttcggcgt gccgctgaaa ggcagctttc tcacgcttac
     2821 cctcgcggcg ctgctttacg tcatcatcgc caccggtctg gggctgctga tctccacgtt
     2881 tatgaagagc caaatcgccg ctatttttgg gacgtcgatt attaccctca ttccggcaac
     2941 acaattttcc ggcatgatcg atccggtggc ttcgctggaa ggaccgggaa gatggatcgg
     3001 cgagatctac ccgaccagcc attttctgac gatcgcgcgc gggacgtttt ccaaagcgtt
     3061 ggatctgtcc gatctctggt cgttatttat gccgttactg attgccgtcc cggtggtgat
     3121 gggtctgagc attctgctgc tgaaaaaaca ggaggggtaa tgcgcggatt acgtaatatt
     3181 tataacctcg gcgtcaaaga actgcgcagt ctgctgggcg acaaagcgat gctggcgctg
     3241 atcgtcttcg cctttacgat ttcggtttac tcctccgcga ccgtcctgcc cggttcgttg
     3301 catcttgccc ctatcgccat cgccgatatg gatcagtcac agttgtcgaa ccgtattgtg
     3361 aatagttttt accgcccgtg gtttctgccg ccggagatga ttacggcaac ggaaatggat
     3421 gccggactgg atgccggacg ctataccttt gcggtcaata ttccgccgaa tttccagcgt
     3481 gatgtgctgg ccggacgtca gcctgatatc caggttaacg tcgatgcgac gcgcatgagc
     3541 caggcgttta ccggcaacag ttatatccag aatattatta gcggcgaggt caacagcttt
     3601 gtggcgcgcg cggggagata gcgttcagcc ggtgtcgctg gaaattcgga tgcgctttaa
     3661 cccgaatctg gacccggcgt ggtttggcgg cgtgatggcg attatcaaca acattaccat
     3721 gctggcgata gtgctgaccg gatcggcgct gatccgcgag cgagaacatg gcacggtaga
     3781 gcatctgtta gtgatgccgg tcacgccctt tgagatcatg atggcaaaag tgtggtcgat
     3841 ggggctggtc gtgctggtgg tttccggttt gtctttgatg ctgatggtga aaggcgtact
     3901 tggcgtaccg attgaaggat cgatcccatt gtttatgttg ggcgtggcgc tgagcctgtt
     3961 cgccaccact tcaattggga tttttatggg caccatcgcc cgttcgatgc cgcagctggg
     4021 gttattaatg attctggtgc tgttgccgct acaaatgctc tccggcggtt ccacgccgcg
     4081 cgaaagtatg ccgcaggcgg tgcaggatat tatgctgacc atgccaacga cgcattttgt
     4141 cagccttgcc caggctattc tttatcgcgg cgcaggttta agtattgtct ggccgcagtt
     4201 cctgaccctg ctggcgatag gcggcgtgtt cttcctgata gcgctgttac gcttcagaaa
     4261 aacgattggc acgatggcgc aaacattatt gccggatggc ggctgcgcct catccggcct
     4321 acaaacgacg acgtgcgaac gtaggccggg caagcgaagc gcccccggca aggcgctggg
     4381 gcgttagtct tctttcggca aacattgcaa gtggccgtgg cgcacgccgc gctgggcgat
     4441 aacatcatcg gcaaaatgct gtacgtcgcc catatcgccc ttcagaacgg cgatctccag
     4501 acagtcatcg tggttgatat ggacgtgcag cgtggcgacg gataaatcat gatgatgatg
     4561 ctgggtggag acgatgcggc tggctaaatc ccgtttctca tgttcataaa catatgaaag
     4621 taccgcgaaa ccctgtgtac cgtgttcctg ggtggcctcc tgcgccagag cgccgcgcag
     4681 aatatcacgg atcgcttcgg agcgattgtt atagccgcgt cgctggctca ggctgtccag
     4741 cgtttccagt aaatcgtcat cgagggtgat ggtgacacgt tgcatctgac ttaaaccttt
     4801 tggtatggcg cgtcggcgca tgggaagctc cgcattttgt aacacacgtc cgccgccaga
     4861 gggaaaatta atgtgtcata acgcttttgt tatcgtctgc ggcgtcagcg taaacggtgt
     4921 gggggtacag actgccagac tgagcgtatc gagctgacac tggctgaccg acaaggcaga
     4981 gggcaacgtg ctgtccacgc tgacgatttg ccaggcgctg ccgccgcgtt gttttacgat
     5041 ggcttcttta cgcgtccaga tacgccagaa ggccgccagt tgtcgctccg gacgttccgc
     5101 ttccatttca gcatgttcgc cgaggctgaa taccgcattt gccagcgaac gccagttatc
     5161 gcgcgggcgg atcacttcaa tatcgcagcc gacttcacct tcgtcgctaa gcaacagagc
     5221 aatagtgtcg ccgctatggc tgaggttaaa ccacagcggc gttccggcgg aaaaagccgg
     5281 tttaccctgt tcgccataca c
//
LOCUS       DAGWFR010000234         5263 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.237, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000234 DAGWFR010000000
VERSION     DAGWFR010000234.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 5263)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5263)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5263
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.237"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..615)
                     /gene="brnQ"
                     /locus_tag="MOX77_004265"
     CDS             complement(<1..615)
                     /gene="brnQ"
                     /locus_tag="MOX77_004265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid transport system II
                     carrier protein"
                     /protein_id="HCA3359650.1"
                     /translation="MTHQLKSRDIIALGFMTFALFVGAGNIIFPPMVGLQAGEHVWTA
                     AIGFLITAVGLPVLTVVALAKVGGGVDSLSTPIGKVAGLLLATVCYLAVGPLFATPRT
                     ATVSFEVGIAPLTGDSAMPLLIYSVVYFAIVILVSLYPGKLLDTVGNFLAPLKIIALV
                     ILSVAAIVWPAGPISNALDAYQNAAFSNGFVNGYLTMDTLGAMVF"
     gene            complement(1024..2319)
                     /gene="phoR"
                     /locus_tag="MOX77_004266"
     CDS             complement(1024..2319)
                     /gene="phoR"
                     /locus_tag="MOX77_004266"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate regulon sensor histidine kinase PhoR"
                     /protein_id="HCA3359651.1"
                     /translation="MLERLSWKRLVLELVLCCIPALILSAFFGYLPWFLLAAVTGLLV
                     WHFWNLLRLSWWLWVDRSMTPPPGRGSWEPLLYGLHQMQLRNKKRRRELGNLIKRFRS
                     GAESLPDAVVLTTEEGGIFWCNGLAQQILGLRWPDDNGQNILNLLRYPEFTQYLKTRD
                     FTRPLHLVLNTGRHLEIRVMPYTDKQLLMVARDVTQMHQLEGARRNFFANVSHELRTP
                     LTVLQGYLEMMQEQALEGATREKALHTMREQTYRMEGLVKQLLTLSKIEVAPALLLNE
                     KVDVPMMLRVVEREAQTLSQQKHTFTFAVDDSLSVLGNEEQLRSAISNLVYNAVNHTP
                     AGTHITVSWRRAAHGAEFCIQDNGPGIAAEHIPRLTERFYRVDKARSRQTGGSGLGLA
                     IVKHALNHHESRLEIDSSPGKGTRFSFVLPERLIAKNSD"
     gene            complement(2389..3078)
                     /gene="phoB"
                     /locus_tag="MOX77_004267"
     CDS             complement(2389..3078)
                     /gene="phoB"
                     /locus_tag="MOX77_004267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000113934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate response regulator transcription
                     factor PhoB"
                     /protein_id="HCA3359652.1"
                     /translation="MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNKLNE
                     PWPDLILLDWMLPGGSGLQFIKHLKREAMTRDIPVVMLTARGEEEDRVRGLETGADDY
                     ITKPFSPKELVARIKAVMRRISPMAVEEVIEMQGLSLDPGSHRVMTGDSPLDMGPTEF
                     KLLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALEHSGHDRMVQTV
                     RGTGYRFSTRF"
     gene            3293..4495
                     /gene="sbcD"
                     /locus_tag="MOX77_004268"
     CDS             3293..4495
                     /gene="sbcD"
                     /locus_tag="MOX77_004268"
                     /EC_number="3.1.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exonuclease subunit SbcD"
                     /protein_id="HCA3359653.1"
                     /translation="MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLETAQAHQVDAII
                     VAGDIFDTDSPPSYARELYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDILAFLNT
                     TVIASAGYAPRLLHRRDGSPGAVLCPIPFLRPRDIITSQAGLSGSEKQQQLLHAIADY
                     YQQQYQEACLLRGERKLPVIATGHLTTVGASKSDAVRDIYIGTLDAFPAQHFPPADYI
                     ALGHIHRAQCVGGTEHIRYCGSPIALSFDECGKSKCVHLVTFDQGKWQSTESLAVPVT
                     QLLAVLKGDLASITEQLEQWRGVEQSPPVWLDIEITTDDYLHDIQRRIQALTESLPVE
                     VLLVRRSREQRERSLANERRETLSELSVEEVFARRLALEALDTPQRERLNQLFSSTLY
                     ALNEEHEA"
     gene            4492..>5263
                     /locus_tag="MOX77_004269"
     CDS             4492..>5263
                     /locus_tag="MOX77_004269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HCA3359654.1"
                     /translation="MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKT
                     TLLDAICLALYHETPRLNTVSQSQNDLMTRDTAECLAEVEFEVKGEAWRAFWSQNRAR
                     NRPDGNLQAPRVELARCSDGKIFADKVKDKLEMIATLTGLDYGRFTRSMLLSQGQFAA
                     FLNAKAKERAELLEELTGTEIYGQISAQVFEKHKSARLELEKLQAQASGVALLADEQL
                     QQLEASLQALTDEEKRLLADQQGQQQHLHWLTRKNELHT"
BASE COUNT         1324 a         1474 c         1330 g         1135 t
ORIGIN      
        1 aaacaccatc gcgcccagcg tatccatcgt cagatagccg ttcacaaatc cgttagaaaa
       61 ggccgcattc tgataagcgt ccagggcgtt gctgattgga ccggcaggcc aaacgatagc
      121 cgcgacggac aggatgacca gcgcaataat tttcaacggc gccaggaaat tccctaccgt
      181 atccagcagc ttacccggat agagggaaac cagaataacg atagcgaaat agaccacgct
      241 gtaaatcagc aacggcattg cagaatcgcc ggtcaacgga gcgataccga cctcaaacga
      301 caccgtcgcg gtacgcggcg tcgcaaataa cggcccgacg gccagatagc aaacggtcgc
      361 cagcaggagt cccgccactt taccaatcgg cgtactgagg ctgtctacgc cgccgccgac
      421 tttcgccagc gccacaacag taagaaccgg tagccctacg gcggtaatca gaaagccaat
      481 agcggctgtc cagacgtgtt cacccgcctg caaaccgacc ataggaggaa agataatatt
      541 gcctgcgcca acgaacagcg caaatgtcat aaagcccagg gcgatgatat cgcgcgattt
      601 taactgatgg gtcataaagt cttactgcct gtggatggtg atgttgtaaa cattaaaatt
      661 tttgcctttc ccggaggatt ataaagcggc gttttttatc aatttcagcg ggaaaaactc
      721 ccggaccgat gcggcgaaga attgtttttc gatttaccgc gcaaatgcag tcgtaatgac
      781 agcacctgaa gcgcaattta aacgcttata acgttttaaa gcaaggtggg atctaaaaac
      841 cagatgaata tcgcgatatg aaatttacaa ccagaataaa acaccattct catgaaaaag
      901 ttatggctaa tcatgcgaac aaaaaatcac caaacgttga atgtttcaac gagcccgtct
      961 taactgcaaa gaaaataagc cagcatccgc tggcttatgg aaagttatac ttacgaaagg
     1021 caattaatca ctatttttgg caattaaacg ttccggcagc acaaagctaa atcgcgttcc
     1081 tttgccaggc gaactgtcga tttcaaggcg gctttcatgg tgattcaacg catgtttcac
     1141 aatcgccaat cccaggccgc tgccgcccgt ttgccgcgaa cgcgctttat cgacgcggta
     1201 gaagcgttcg gtcagacgag gaatatgctc ggcagcaatc cccggaccgt tatcttgaat
     1261 gcaaaattca gcgccatgcg cggcacgtcg ccagctcacc gtaatatgcg ttcccgccgg
     1321 cgtatggttt actgcgttat ataccaggtt tgagatcgcg ctacgtagct gctcttcatt
     1381 gcccagaacg ctaagactat cgtcgaccgc aaacgtaaag gtatgtttct gctggctgag
     1441 cgtctgcgct tcacgctcca cgacccgcag catcatcggt acatccactt tttcatttaa
     1501 taacagcgcc ggggccacct caattttaga cagcgtaagc agttgtttta ccagcccttc
     1561 catacgatac gtttgctcgc gcatcgtatg cagcgctttc tctcgcgtcg ccccttccag
     1621 cgcctgttcc tgcatcattt ccagatagcc ttgcaatacc gtcaatggcg tacgcaactc
     1681 atggctaacg ttggcgaaaa agttacgtct ggcgccttca agctgatgca tttgcgtcac
     1741 atcgcgcgcc accatcagga gttgtttatc ggtataaggc atgacgcgga tctccagatg
     1801 ccgcccggta ttgagcacca aatgaagcgg acgggtgaaa tcacgcgttt ttaaatactg
     1861 ggtaaactcc ggataacgca gtagattgag aatattctgc ccgttgtcat ccggccagcg
     1921 tagccccagt atctgttgcg ccaaaccgtt acaccaaaaa atgccgccct cttctgtggt
     1981 cagtaccacg gcatcaggca gcgactccgc gccgctgcga aaacgtttaa tcaggttccc
     2041 cagctcgcgg cgacgcttct tatttcgcaa ctgcatctgg tgtaaaccgt ataacagcgg
     2101 ttcccaactt ccccgccccg gcggcggcgt catacttctg tcgacccaaa gccaccagga
     2161 gaggcgtaac aaattccaga aatgccagac aagcagtccc gtcaccgccg ccagtaaaaa
     2221 ccacggcaga taaccaaaaa aagcgctaag gataagcgcg gggatgcaac agagcaccag
     2281 ctccagcacc agccttttcc atgacagccg ttccagcacg cgtcatactc cctcaagaat
     2341 ggaaagcctt ctccgccaga aacctgtgat caactggcgg aaaaggcatt aaaagcgggt
     2401 cgaaaaacga taccctgtcc cgcgtaccgt ttgcaccatc cggtcgtggc cgctgtgctc
     2461 cagcgcctta cgcaaacggc gaatatgcac gtcgaccgtc cggtcttcaa cgtacacatt
     2521 ggtgccccag acatgattga gcagctgttc gcggctgtaa acccgttccg ggtgcgtcat
     2581 aaagaaatgg agtaatttaa attcggtcgg ccccatatcc agcgggctgt cgccggtcat
     2641 cacgcggtga gagccaggat caaggctcag tccctgcatc tcgatcacct cttcgaccgc
     2701 catcggcgag atacgccgca taacggcttt aatgcgcgcc accaactcct tgggggaaaa
     2761 cggcttggta atgtaatcgt cagcgccggt ttccagcccg cgcacacgat cttcttcctc
     2821 acctctcgcg gtcagcataa ccacaggaat atcccgggtc atggcctcac gtttgagatg
     2881 tttaataaac tgtaaccctg acccgccggg caacatccag tcaagaagga tgagatccgg
     2941 ccagggttca ttaagtttat tcaccgcact gtcataatct tcggcttcta cgggctgaaa
     3001 gccattttgt tcgagcacga agcacaccat ttcacggatc ggcgcctcat cttctacgac
     3061 cagaatacgt ctcgccataa tttgccctgt tagtcgttag ttatcaatgc cgcgccatta
     3121 tgcgtcagat ttatgacaga tttatgaaaa aaaaaggcgg cattgacagc atgttgatga
     3181 tttatgacac cggtgaaacc gtgcattacc gtgtaccggc ggtaaattgc gcccaaaaat
     3241 ggaggggatg acgtgtataa tcccgttcac gctttttttg catggaacaa ttatgcgcat
     3301 cctccacacc tctgactggc atctgggaca aaacttctac agtaaaagcc gcgccgcgga
     3361 gcatcaggct tttctggact ggctgctgga gaccgcgcag gcccatcagg tggatgccat
     3421 tattgtcgct ggcgatattt ttgataccga ttcgccgcca agctatgccc gagaacttta
     3481 taaccgtttc gtcgttaatt tacagcaaac gggctgtcat ctggtggtgc tggccggtaa
     3541 tcatgattcc gtcgccacgc taaacgaatc gcgcgacatt ctggcgtttc tcaatacaac
     3601 cgtgatcgcc agcgcgggct atgcgcctcg gctacttcat cgtcgcgacg ggtctccggg
     3661 cgccgtactg tgccccattc cctttttgcg cccgcgcgac attattacca gtcaggcggg
     3721 attatccggc agcgagaaac agcagcaact tcttcatgca attgccgatt attatcaaca
     3781 gcagtatcag gaagcgtgcc tgctacgcgg cgaacgaaag ctgccggtta tcgcaacggg
     3841 acatttaacc accgtcggcg ccagcaaaag cgatgcggtt cgcgacattt atatcggtac
     3901 gctggatgcc tttccggcgc agcatttccc ccctgcggat tatatcgcat tgggacacat
     3961 tcaccgcgcg caatgtgtcg gcggcacaga gcatatccgc tattgcggct cgcccatcgc
     4021 cctcagcttt gatgagtgcg gcaaaagcaa atgcgtgcat ctggtgacct tcgaccaggg
     4081 aaaatggcaa agtaccgaaa gtctggctgt ccccgtgact caactgttgg cggttttaaa
     4141 aggcgacctg gcgtcaatta ccgaacagct tgagcagtgg cgcggcgttg agcaatcgcc
     4201 ccccgtctgg ctggatattg aaatcaccac cgatgattat ctgcatgata tccaacgcag
     4261 aatacaggca ttaacggagt cactccccgt agaggtatta ctggtgcgcc gtagccgcga
     4321 acagcgtgag cgctcgctgg cgaacgagcg gcgggaaaca ttaagcgagc ttagcgtgga
     4381 agaggttttt gcgcggcgtc tggcgctgga agcgttagat accccgcagc gcgagcgcct
     4441 gaatcagctc ttttccagca cgctctacgc gttgaatgag gagcatgagg catgaaaatt
     4501 ctcagtttgc gtctgaaaaa cctgaactcg ctgaaaggag aatggaaggt cgactttacc
     4561 gccgaaccgt ttgccagtaa cgggttattc gccattaccg gcccgaccgg cgcgggaaaa
     4621 accaccttgc ttgacgccat ctgcctggcg ctgtaccacg aaacgccgcg cctgaatacg
     4681 gtatcgcaat cgcaaaacga tttgatgacg cgcgatacgg cggaatgtct ggccgaagtg
     4741 gagtttgagg taaaaggcga agcctggcgc gcgttctgga gccagaaccg agcccgaaat
     4801 cggcctgacg gcaatctcca ggccccacgc gtggagctgg cgcggtgttc agacggaaag
     4861 atctttgccg ataaggtaaa ggataaactg gagatgatcg ccacgttgac cgggctggac
     4921 tacgggcgct tcacccgttc aatgttgtta tcacaggggc agttcgccgc ctttcttaac
     4981 gccaaagcga aagagcgcgc agagcttctg gaggagctca ccggcactga gatttacggg
     5041 cagatctccg cacaggtatt tgaaaaacat aaatcagccc gtctcgaact ggaaaagtta
     5101 caagcgcagg ccagcggcgt cgccctattg gcggacgaac agttacagca actggaagcc
     5161 agtttgcagg cgcttactga cgaagagaaa cgcctgctgg ccgaccagca gggacagcag
     5221 cagcaccttc actggctgac ccgaaaaaac gagctccaca ctg
//
LOCUS       DAGWFR010000235         5137 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.238, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000235 DAGWFR010000000
VERSION     DAGWFR010000235.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 5137)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5137)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5137
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.238"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..324)
                     /locus_tag="MOX77_004270"
     CDS             complement(<1..324)
                     /locus_tag="MOX77_004270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-forming cytochrome c nitrite reductase
                     subunit c552"
                     /protein_id="HCA3359655.1"
                     /translation="MARKTLRARRFFSLIFPFFFITSVYAEQTPVSAKTVTVEAKNET
                     FAPQHPDQYQSWKATSEQSAREDALAEDPRLVILWAGYPFSRDYNKPRGHAYAVTDVR
                     ETLRTG"
     gene            756..2714
                     /gene="acs"
                     /locus_tag="MOX77_004271"
     CDS             756..2714
                     /gene="acs"
                     /locus_tag="MOX77_004271"
                     /EC_number="6.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase"
                     /protein_id="HCA3359656.1"
                     /translation="MSQTHKHAIPANIADRCLINPEQYETKYKQSINDPDTFWGEQGK
                     ILDWITPYQKVKNTSFAPGNVSIKWYEDGTLNLAANCLDRHLQENGDRTAIIWEGDDA
                     SQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHS
                     VIFGGFSPEAIAGRIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVI
                     VLKRTGNDIDWQEGRDLWWRDLIEKASPEHQPEAMNAEDPLFILYTSGSTGKPKGVLH
                     TTGGYLVYAATTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVP
                     NWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINP
                     EAWEWYWKKIGKEKCPVVDTWWQTETGGFMITPLPGAIELKAGSATRPFFGVQPALVD
                     NEGHPQEGATEGNLVITDSWPGQARTLFGDHERFEQTYFSTFKNMYFSGDGARRDEDG
                     YYWITGRVDDVLNVSGHRLGTAEIESALVAHPKIAEAAVVGIPHAIKGQAIYAYVTLN
                     HGEEPSPELYAEVRNWVRKEIGPLATPDVLHWTDSLPKTRSGKIMRRILRKIAAGDTS
                     NLGDTSTLADPGVVEKLLEEKQAIAMPS"
     gene            2953..3267
                     /locus_tag="MOX77_004272"
     CDS             2953..3267
                     /locus_tag="MOX77_004272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF485 domain-containing protein"
                     /protein_id="HCA3359657.1"
                     /translation="MNDQIYQRIEDSARFRELVEKRQRFATILSVIMLAVYISFILLI
                     AFAPGWLGTPLHAGTSVTRGIPIGVGVIVISFVLTGIYIWRANGEFDRLNNAVLHEVK
                     AL"
     gene            3264..4913
                     /gene="actP"
                     /locus_tag="MOX77_004273"
     CDS             3264..4913
                     /gene="actP"
                     /locus_tag="MOX77_004273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation/acetate symporter ActP"
                     /protein_id="HCA3359658.1"
                     /translation="MKRVLTALAAALPFAAHAADAISGAVERQPTNWQAIIMFLIFVV
                     FTLGITYWASKRVRSRSDYYTAGGNITGFQNGLAIAGDYMSAASFLGISALVFTSGYD
                     GLIYSLGFLVGWPIILFLIAERLRNLGRYTFADVASYRLKQGPIRILSACGSLVVVAL
                     YLIAQMVGAGKLIELLFGLNYHIAVVLVGVLMMMYVLFGGMLATTWVQIIKAVLLLFG
                     ASFMAFMVMKHVGFSFNNLFTEAMAVHPKGTAIMSPGGLVQDPISALSLGLGLIFGTA
                     GLPHILMRFFTVSDAREARKSVFYATGFMGYFYILTFIIGFGAIMLVGANPAYKDAAG
                     ALIGGNNMAAVHLANAVGGNLFLGFISAVAFATILAVVAGLTLAGASAVSHDLYANVF
                     RKGATEREELKVSKITVLVLDVIAIILGVLFENQNIAFMVGLAFAIAASCNFPIILLS
                     MYWSKLTTRGAMLGGWLGLLTAVVLMILGPTIWVQILGHEKAIFPYEYPALFSISVAF
                     LGIWFFSATDNSAEGNREREQFRAQFIRSQTGFGVQQGRAH"
     gene            complement(4952..>5137)
                     /locus_tag="MOX77_004274"
     CDS             complement(4952..>5137)
                     /locus_tag="MOX77_004274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LrgB family protein"
                     /protein_id="HCA3359659.1"
                     /translation="LRLSIREGMAKGAGFGAASHGAGTARSYELGQQEGVVASLVMML
                     SGVVMVLAAPLVARVMF"
BASE COUNT         1130 a         1377 c         1409 g         1221 t
ORIGIN      
        1 gccggtacgc agcgtttcgc gcacgtcggt taccgcatac gcgtggccgc gtggtttgtt
       61 gtaatcacgg gagaagggat agcccgccca caggatcacc agacgagggt cttccgccag
      121 cgcatcttca cgggcagact gttctgacgt cgctttccat gactgatatt ggtcggggtg
      181 ttgaggcgcg aacgtttcat ttttcgcttc aacagtaacg gtttttgcgg atacaggcgt
      241 ttgctcagcg taaacagagg taatgaagaa aaaaggaaat ataaggctga agaaacggcg
      301 tgcgcgtagt gttttccttg ccatagaggt ctcatccaga ttgcgccatt atctttaatg
      361 gcgatttttt atcgttttcc ataacagcaa ccgcacaaat actgttatta cattgatctc
      421 ctctatgtgt aacaaataac cacactcaaa atgttgtctt taatcaattg taagtgtatg
      481 taaaatacca ctttagagtt agtaacctgg acaaaactcc ctctcttttc tgatttccgg
      541 acacggatca cttttttaaa aaatttcata taacgtcatg ttatcccgaa aatttatcta
      601 attttgcggg acacaatcaa aaaatagatt gctgcttatt tgcacagctc cctttttgcg
      661 tgatctgtcg cccaaatact aaacaaaact tattaagacc ctacatttaa cgtttatgcg
      721 acatattatt aacatcctac aaggagaaca acagcatgag ccaaacacat aaacacgcca
      781 ttcccgccaa cattgcggat cgttgcctga taaatccaga gcagtatgag actaaatata
      841 aacagtctat taacgacccc gatacgtttt ggggcgaaca gggaaaaatt ctcgattgga
      901 tcacgccgta ccaaaaagtg aaaaacacct cctttgcgcc aggcaatgtg tcgattaaat
      961 ggtacgagga cggcacgctg aatctggcgg cgaactgtct tgaccgccat ttgcaggaaa
     1021 atggcgatcg caccgccatt atctgggaag gcgatgacgc gtcgcagagt aaacatatct
     1081 cttatcgcga actgcatcgc gatgtctgcc gtttcgcgaa tacactgctg gatctgggca
     1141 ttaaaaaagg cgatgtggta gcgatttata tgccgatggt gccggaagcg gcggtggcaa
     1201 tgttggcctg cgcccgcatc ggtgcggtgc attcggtgat cttcgggggc ttctcgccgg
     1261 aagccatcgc cggacgcatt atcgactcca gctcgcggct ggtgatcacc gctgacgaag
     1321 gtgtacgtgc cggacgcagt atcccgctga aaaagaatgt cgatgacgcg ctgaaaaacc
     1381 cgaatgtcac tagcgttgag catgtgatcg tcctgaagcg caccggcaac gacattgact
     1441 ggcaagaagg ccgcgacctg tggtggcgcg atttgattga aaaagccagc cctgagcacc
     1501 agcctgaagc gatgaatgcc gaagatccgc tgtttatcct ttatacctcc ggctccaccg
     1561 gcaagccgaa aggcgtgctg cacaccaccg gcggctatct ggtctacgcc gcgaccacct
     1621 ttaagtatgt ctttgattat caccctggcg atatttactg gtgtaccgcc gatgtgggtt
     1681 gggtgacggg gcacagctat ctgttgtatg gcccgctggc ctgcggcgcg accaccttaa
     1741 tgtttgaagg cgtgccgaat tggccaacgc ccgctcgcat gtgccaggtg gtcgacaaac
     1801 accaggtcaa cattctctat accgccccga cggccatccg cgcgctgatg gcggaaggcg
     1861 ataaagccat tgaaggcacc gaccgttctt cactacgcat tctgggttcc gtcggcgagc
     1921 cgatcaatcc cgaagcgtgg gaatggtact ggaagaagat cggcaaggaa aaatgtccgg
     1981 tcgtcgacac ctggtggcag actgaaacag gcggttttat gatcacgccg ctaccaggcg
     2041 ctatcgaact gaaagccggt tccgccaccc gtcctttctt tggcgtacag cctgcgctgg
     2101 tggataacga aggccatccg caagaaggcg cgacggaagg caatctggtc atcaccgatt
     2161 cctggccggg ccaggcgcgc actctgttcg gcgatcatga acgttttgag cagacctatt
     2221 tctctacctt taagaatatg tatttcagcg gcgacggcgc gcgtcgcgat gaggacggct
     2281 attactggat caccggtcgc gtggatgacg tgttaaacgt ctccggccac cgtctgggta
     2341 cggcggaaat cgagtcagcg ctggtggcgc atccgaagat cgccgaagcg gcggtggtgg
     2401 gtattccaca cgctatcaaa ggccaggcga tttacgctta tgtgacgctc aaccacggcg
     2461 aggagccgtc gccagaactg tacgcggagg tgcgcaactg ggtacgtaaa gagattggcc
     2521 cactggcgac gccggacgtg ctgcactgga ccgactcact gccaaaaacc cgttccggca
     2581 aaattatgcg ccgcattttg cgcaaaatcg cggcgggcga taccagcaat ctgggcgata
     2641 cctcgactct cgccgatcct ggcgtggtgg agaaactgct cgaagagaag caggccatcg
     2701 cgatgccgtc ataaccataa atgccggatg gcaacgcgaa cgcgttttat ccggcctacg
     2761 accctacccc tgccctctct caaaccggga gagggaaata taaaaaccct cccccaaagg
     2821 atttcgtgtt acaggaaggc ggcaagcgag cacaccctca gcagcatagt tcactatgtg
     2881 gctggggcgc gcgagtgcgg ccagcgcgcc tgtagcgcga aagacgcagg gggacctctg
     2941 gagagctctg tgatgaatga ccaaatttat cagcggatag aagacagtgc gcgtttcagg
     3001 gaattagttg aaaaacggca acggtttgcc acgattctgt cggttatcat gctggcggtt
     3061 tatatcagct ttattttact gatcgccttc gcgcctggct ggctgggcac gcctctacat
     3121 gcgggaacca gcgtcacccg aggaattccc attggcgtcg gggtgattgt gatttctttt
     3181 gtgttgaccg gaatttatat ctggcgggcg aatggcgaat tcgatcgtct taataacgcc
     3241 gtactgcatg aggtgaaagc attatgaaga gagttctgac ggcgctcgcc gccgcactcc
     3301 ccttcgccgc tcatgcggcg gatgccatta gcggcgcggt tgaacgccag cccaccaact
     3361 ggcaggcgat tatcatgttt ttgattttcg tcgtgtttac gctcggtatt acctactggg
     3421 cctctaaacg cgtacgttcc cgtagcgact actacacggc tggcggcaat atcaccgggt
     3481 tccagaacgg gctggcgatt gccggcgact atatgtccgc cgcgtcattt ctcggcattt
     3541 ccgcgctggt gtttacctcc ggttatgacg ggctgatcta ttcgctgggc ttccttgtcg
     3601 gctggccaat tatcctgttt ttgattgccg agcgcctgcg taatctggga cgttatactt
     3661 ttgctgacgt tgcctcttat cgcctgaaac aggggccaat ccgtattctt tcggcctgtg
     3721 gctccctggt agtggtggcg ctttatctca tcgcccaaat ggtcggcgcc ggtaaactga
     3781 ttgaactgct gttcggcctc aactatcaca tcgccgtagt gctggtcggc gtgctgatga
     3841 tgatgtacgt gctgttcggc gggatgctgg cgacaacgtg ggtgcaaatt atcaaagccg
     3901 tcctgttgct gtttggcgcc agttttatgg cctttatggt gatgaaacac gtcggcttta
     3961 gcttcaataa tctgtttacc gaagccatgg cggtacaccc gaaaggcacg gcgattatga
     4021 gcccaggagg attggtgcaa gatccgattt cggcattgtc gttgggtctg ggactgatat
     4081 tcggcaccgc cggtttgccg catattctga tgcgtttctt tacggtcagc gatgcccgcg
     4141 aagcgcgcaa gagcgtgttc tacgccaccg gttttatggg ctatttctac attctgacct
     4201 ttattatcgg cttcggcgct atcatgctgg tgggggcgaa tcccgcctat aaagatgccg
     4261 caggcgcgct gattggcggc aataacatgg cggcggtgca tctggccaac gcggtaggcg
     4321 gcaacctgtt cctcggcttt atttcggcag tggcgtttgc caccattctg gcggtggtcg
     4381 caggtctgac gctggcgggc gcatcggcgg tgtcgcatga cttgtacgcc aacgtgttcc
     4441 gcaaaggcgc aaccgaacgt gaagagctga aggtgtcgaa aatcaccgtc ctggtgctgg
     4501 acgtgatcgc cattatcctc ggcgtcctgt ttgaaaatca gaacatcgcc tttatggtgg
     4561 gcctggcatt tgctatcgcc gcgagctgca acttccccat cattctgctt tccatgtact
     4621 ggtcaaaact gaccacgcgc ggcgctatgc tgggcggctg gttaggttta ctgacagcgg
     4681 tggtgctgat gattcttggc cctaccattt gggtgcagat cctcggccac gaaaaagcga
     4741 tcttcccgta tgagtatccg gcgctgttct ctatcagcgt ggcgttcctg gggatctggt
     4801 tcttctcggc caccgataac tcggcagaag gcaaccgtga acgtgagcag ttccgcgctc
     4861 agtttatccg ctcccaaacg ggattcggcg tacaacaagg gcgtgcgcat taatcttacc
     4921 gtttcctccg gccctgtggg tcggaggaaa atcagaacat caccctcgcc accagcgggg
     4981 ctgccagcac catcaccacg ccggacagca tcattaccag actggcgacg acgccctcct
     5041 gctgaccaag ttcataggaa cgcgccgtgc ctgccccatg tgacgccgcg ccgaatcctg
     5101 ccccttttgc catgccttcc cggatagaga gacgcaa
//
LOCUS       DAGWFR010000236         5124 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.239, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000236 DAGWFR010000000
VERSION     DAGWFR010000236.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 5124)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5124)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5124
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.239"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(4..1257)
                     /locus_tag="MOX77_004275"
     CDS             complement(4..1257)
                     /locus_tag="MOX77_004275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3359660.1"
                     /translation="MSRTTILDDATASDIDEQRHSQPVQFIKRGTAPFMRVTLALFSA
                     GLATFALLYCVQPILPVLSQEFGVSPASSSVSLSISTAMLAIGLLFTGPLSDAIGRKP
                     VMVTALLLASCCTLLSTMMTSWHGILIMRALIGLSLSGVAAVGMTYLSEEIHPSFVAF
                     SMGLYISGNSIGGMSGRLLSGVMTDFFNWRIALAAIGCFALASALMFWKILPASQHFR
                     PTSLRPKTLFINFRLHWRDRGLPLLFAEGFLLMGAFVTLFNYIGYRLMLSPWELSQAV
                     VGLLSVAYLTGTWSSPKAGAMTSRYGRGPVMLFSTAVMLGGLLLTLFTSLWLIFAGML
                     LFSAGFFAAHSVASSWIGPRARRAKGQASSLYLFSYYLGSSIAGTLGGVFWHSYGWNG
                     VGGFIALMLVLAILVGTRLHHRLHA"
     gene            1377..2276
                     /locus_tag="MOX77_004276"
     CDS             1377..2276
                     /locus_tag="MOX77_004276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCA3359661.1"
                     /translation="MNIELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQILEQQ
                     VGARLLARTNRSVALTAAGRQFLADSRHILSLVNDAAARAERLHQGEAGEIRIGFTSS
                     APFIRAVSHTFSLFRQSYPGVHMQTREMNTREQIAPLNEGVLDIGLLRNTPLPDTLNR
                     EVILHEPLMAMIPREHRLAQKPVVSLTELAEEPFVFFDPHVGTGLYDDILGLMRRYNL
                     SPTITQEVGEAMTIIGLVAAGLGVSILPASFKRVQMSEMRWVPLAEEDAVSEMWLVWP
                     KHHEQSHAVQRFCQLLLLAARQD"
     gene            2404..3624
                     /locus_tag="MOX77_004277"
     CDS             2404..3624
                     /locus_tag="MOX77_004277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family transcriptional regulator"
                     /protein_id="HCA3359662.1"
                     /translation="MVADSQPGHIDQIKQTNAGAVYRLIDQLGPVSRIDLSRLAQLAP
                     ASITKIVREMLEAHLVQELEIKEAGSRGRPAVGLMVETEAWHYLSIRISRGEIFLALR
                     DLSSKLVVEECLALPLNEATPLLERIITHVDRFFTRHQQKLERLTSIAITLPGIIDTE
                     NGVVHRMPYYEDVKEMPLGDALERHTGVPVYIQHDISAWTMAEALFGASRGARDVIQV
                     VIDHNVGAGVITDGHLLHAGSSSLVEIGHTQVNPYGKRCYCGNHGCLETIASVDSVLE
                     LTQLRLNQSISSMLHGQPLTVDSLCQAAMQGDLLAKDIISGVGAHVGRILAIMVNLFN
                     PQKILIGSPLSKAADILFPAIADSIRQQALPAYSRNTVVESTQFTNQSTMAGAALVKD
                     AMYNGSLLIRLLQG"
     gene            3750..4445
                     /gene="bioD"
                     /locus_tag="MOX77_004278"
     CDS             3750..4445
                     /gene="bioD"
                     /locus_tag="MOX77_004278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent dethiobiotin synthetase BioD"
                     /protein_id="HCA3359663.1"
                     /translation="MLKRFFITGTDTSVGKTVVSRALLQALSSGGKSVAGYKPVAKGS
                     KETPEGMRNKDALVLQSVSSLELPYEAINPIALSEEESSVAHSCPINYTLLSNGLASL
                     SDKVDHVVVEGTGGWRSLMNDLRPLSEWVVQEQLPVLMVVGIQEGCINHALLTAQAVA
                     NDGLPLIGWVANRINPGLAHYAEIIDVLGKKLPAPLIGELPYLPRAEQRELGQYIRLS
                     MLGSVLAVDRIMA"
     gene            complement(4401..>5124)
                     /gene="clcB"
                     /locus_tag="MOX77_004279"
     CDS             complement(4401..>5124)
                     /gene="clcB"
                     /locus_tag="MOX77_004279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460450.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="voltage-gated ClC-type chloride channel ClcB"
                     /protein_id="HCA3359664.1"
                     /translation="LMLASLGPVVVSAVVALLTTHVLNGSDSLLYTVHLTVDLYAREY
                     VMIVSTGLVAGLWGPLLMWLMTASHNSFLRLKLSPPWQLALGGLIVGLLSLLTPTVWG
                     NGYSVVQSFLLSPPLFSLIGGIFACKILAVLASSGSGAPGGVFTPTLFVGLSIGMFLG
                     RIWGFWLLGSDEIAILLGLAGMATLLAATTHAPIMSTLMICEMTGEYQLLPGLLIACV
                     VASVLSRTLRHDSIYRQHAAEH"
BASE COUNT         1291 a         1259 c         1445 g         1129 t
ORIGIN      
        1 ttttcaggcg tgaagacgat gatgtagccg cgtcccgacc aggatggcca gcaccagcat
       61 tagcgcgata aaaccaccta cgccgttcca gccgtaacta tgccagaata caccgcctag
      121 cgtcccggca atactggacc ccagataata gctgaaaaga taaagtgacg aggcctgtcc
      181 cttcgcccgg cgcgcacgcg ggccaatcca gctactggcc acggagtgcg cggcgaaaaa
      241 gccggcggaa aaaagcagca tcccggcaaa aatcagccaa agcgaggtaa aaagcgtcag
      301 taaaagcccg cccagcatta ctgcggtaga gaacagcatc accggccccc ggccatagcg
      361 tgaggtcatt gcgccagctt tcggcgagct ccatgtgccg gtgagatagg ctacggataa
      421 cagtccgacc acggcctggc ttaattccca gggggagagc atcaggcgat aaccaatgta
      481 gttaaacagg gtgacgaacg cgcccatcag taaaaaacct tccgcaaaca gcagtggtaa
      541 ccctcgatcg cgccagtgga gacggaaatt aataaatagc gttttaggcc gtagcgacgt
      601 gggacggaaa tgttgcgagg caggtaaaat cttccagaac atcagcgcgg acgccagcgc
      661 aaagcatccg atggccgcca gcgcgatgcg ccagttaaaa aagtcggtca tgacgccgct
      721 taataaacgc ccgctcatcc cgccgatgga attaccgcta atatagagcc ccatagagaa
      781 agcgacaaag ctgggatgga tttcttcgct caggtaggtc attcccaccg cggcgacgcc
      841 gcttaacgac agaccgatca gcgcgcgcat aatcagaata ccatgccagc tggtcatcat
      901 ggttgataac aatgtgcagc aggaggctaa taacaaggcg gtgaccatca ccggtttacg
      961 gcctatcgca tcagaaagcg ggccggtaaa aagtaagccg atagccagca tggcggtaga
     1021 aatagaaagt gaaacgctgc tgctggcggg ggagacgcca aactcctggg aaagtaccgg
     1081 tagtataggc tgaacgcaat aaaggagtgc gaaagtcgcc aggcccgcgg aaaaaagagc
     1141 cagcgtgacg cgcatgaaag gcgctgtacc gcgtttaata aattgaaccg gctgagaatg
     1201 gcgttgttca tcgatatcgc tcgccgtggc gtcatcgaga atagttgtac gactcacgtt
     1261 aaatccttgc tttacatctc cgtcaacagg agacgggtat aaccgacatg taaagcatag
     1321 aaaaagcaaa atattctgtc taatatatta attgtctcaa ataagacgtt aaaaatatga
     1381 atatcgaatt acgtcattta cgttactttg tggcggtagc agaagagctg cattttggtc
     1441 gcgccgccgc gcgcctcaat atctcgcagc cgccgctcag tcagcagata caaattctgg
     1501 agcagcaggt cggtgcgcga ttactggcgc ggaccaaccg cagcgtagcg ttaaccgccg
     1561 ccgggcgaca gtttctggcg gatagccgac acatcctgag tctggtaaac gacgccgccg
     1621 ctcgcgccga gcggttgcat cagggcgaag cgggcgaaat ccgtattggt tttacgtctt
     1681 cagcgccttt tattcgggcg gtatcgcata ccttttcgtt gttccgccag tcctatccgg
     1741 gggtgcatat gcaaacgcgt gaaatgaata cgcgtgagca aatcgcgccg ctcaacgaag
     1801 gcgtactgga tattggcttg ctgcggaata cgccgctgcc agacacactt aatcgcgagg
     1861 tgattttgca tgagccgctt atggccatga tcccgcgcga acatcggctg gcgcaaaagc
     1921 cagtcgtcag tctgacagaa ctggcggaag aacctttcgt ctttttcgat ccgcatgtcg
     1981 ggacgggtct ctacgacgat attctcggcc tgatgcggcg ctataacctg tcgccgacca
     2041 tcacgcagga ggttggcgag gcaatgacta ttatcggtct ggtggcggcg ggactgggcg
     2101 tctcgattct gccggcatcc tttaagcgtg tacagatgag cgagatgcgc tgggttcccc
     2161 tggcagaaga ggacgccgta tctgaaatgt ggctggtatg gccaaagcat catgaacaga
     2221 gtcatgccgt acagcggttt tgccaactgc tattactggc tgcccgacag gattaattac
     2281 gcttaaaaag ggtgaaaatg tgcagttaat cacacggcta agcaaaaagt tgacggcgag
     2341 tattgaagtg tttcaccata gcacacagat tatttcggag cgcgaaaata aagggagtga
     2401 gcggtggttg ctgatagtca gcctgggcat atcgatcaaa ttaagcagac caatgctggc
     2461 gcagtgtatc gcctgattga tcagctcgga ccggtatcgc gaattgacct gtctcgtctg
     2521 gcgcagttgg cgcctgccag tattacgaaa attgttcgcg aaatgctgga agcgcatttg
     2581 gttcaggaac ttgaaattaa agaggcgggc agtcgtggac gtcccgccgt cgggctgatg
     2641 gtggaaacgg aagcctggca ctatttatct attcgtatta gccgtggcga aattttcctt
     2701 gcactgcgcg atcttagcag caaactggtg gtagaagagt gtctggcgct gccgttaaac
     2761 gaagctacgc cgttgcttga gcgaattatt acgcacgttg atcggttttt tacccgccat
     2821 cagcagaaac tggagcgttt gacctccatt gccattacgt taccgggcat tatcgatacc
     2881 gaaaacggtg ttgtgcaccg gatgccgtat tacgaagatg tcaaagagat gcctttggga
     2941 gatgcgctgg agcggcacac cggcgtaccg gtttacattc agcatgatat tagcgcctgg
     3001 acgatggcag aggcgctttt tggcgcctca cgcggcgcgc gcgacgttat ccaggtggtg
     3061 attgatcata atgtgggggc gggcgttatc accgacggtc atttgcttca tgcgggcagt
     3121 agcagtctgg tagagattgg gcatacccag gtcaatcctt atggtaagcg ctgttattgc
     3181 ggtaatcatg gctgtctgga gaccatcgcc agcgtcgata gtgtgctgga acttacgcag
     3241 cttcggctta atcagtcgat aagttcaatg ttgcatggcc agccgttaac ggtagattcg
     3301 ctgtgtcagg cggcgatgca gggagatcta ttagcaaaag atattattag cggcgttggc
     3361 gcgcatgtcg gacgcattct ggctatcatg gtgaatttat ttaatccgca aaaaattctt
     3421 attggttcgc cgctaagtaa agcggctgat attctttttc cggccattgc tgacagtatc
     3481 cgtcagcagg cgctgcccgc ctacagtagg aatacggtag tggaaagcac gcagtttacc
     3541 aaccagagca cgatggccgg ggcggcgttg gtaaaagacg cgatgtataa cggctctttg
     3601 ttgattcgtc tattacaggg ttaacatttt ttaactgttg tacaaaaatt tgcgctaact
     3661 caagctgatt gcccttgcca tatcttagac tttctccact gtattatttt cctggcttat
     3721 attttcgaag cataacggtg gagttagtga tgctgaagcg tttctttatt acaggtacag
     3781 acacttctgt tgggaagacg gtggtttccc gcgcattact acaagcgtta tcgtcgggtg
     3841 gtaagagcgt tgcagggtat aaacctgtcg ctaaagggag caaagagact ccagaaggga
     3901 tgcgcaacaa agacgctctg gtattgcaaa gcgtctcttc gctggagttg ccgtatgagg
     3961 cgattaatcc gatcgcgtta agcgaagaag aaagcagcgt cgcgcatagc tgtcctataa
     4021 attacacctt gctgtccaac ggtctggcga gtctgagcga taaagtggac cacgtggttg
     4081 tggagggcac tggtggctgg cgtagtttga tgaatgattt acgtccattg tccgaatggg
     4141 tggtacagga acagttaccg gtattgatgg tggtggggat tcaggagggg tgcattaatc
     4201 atgcgctact gactgcgcaa gctgtcgcta atgatggact gcccttaatt ggctgggtgg
     4261 cgaatcgtat caatcctggc ctggcgcatt atgctgaaat tattgatgtg cttgggaaaa
     4321 aactgccagc gccgctgatt ggcgagttac cgtacctgcc gcgcgccgag cagcgtgagc
     4381 tggggcagta tattcgtttg tcaatgctcg gcagcgtgct ggcggtagat agaatcatgg
     4441 cgtaacgttc gcgagagcac tgacgcgact acacaggcaa tcagcagacc ggggagtaac
     4501 tgatactcgc cggtcatttc acaaatcatc agggtggaca ttatcggcgc atgagttgtc
     4561 gccgccagta gcgtcgccat acccgccagc cccaataaaa tcgctatttc atccgagcct
     4621 agcagccaga atccccatat ccgacccaga aacattccaa tggataatcc gacaaataat
     4681 gttggcgtaa agacgccgcc cggcgcgcca gacccgctgc tggcgagcac cgccaggatt
     4741 ttgcacgcaa aaattccgcc aatcagcgag aatagcggcg gggagagcaa aaatgattgt
     4801 acgacgctat agccgtttcc ccataccgtg ggcgtgagta acgacagtaa tccgacaata
     4861 agcccgccca acgccagttg ccagggcggg gacagtttta agcgtaagaa actattatgg
     4921 ctggccgtca tcagccacat cagcaacgga ccccacagac cggcgaccag accggtactg
     4981 actatcatga cgtactcccg cgcgtagaga tcaacggtca gatgtacggt atagagtagt
     5041 gaatcgctac cgtttaatac atgggtggtt agcagggcga cgacggcgga aacgacaacc
     5101 gggccgaggg aagccagcat taag
//
LOCUS       DAGWFR010000237         5115 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.240, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000237 DAGWFR010000000
VERSION     DAGWFR010000237.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 5115)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5115)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5115
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.240"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..414
                     /locus_tag="MOX77_004280"
     CDS             <1..414
                     /locus_tag="MOX77_004280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3359665.1"
                     /translation="QDDVLMYVMLWRIDAGDYAGALEIGRHALRHGWVMPLGNRNVQT
                     VLAEEMADAAQSAMLAATGFDADLLLQTLELTDGLDMPDQSRARLHKAIGAVLSESNP
                     ASALNHLNHALQLDPRCGVKKDKQQLERRLRNDSR"
     gene            510..974
                     /locus_tag="MOX77_004281"
     CDS             510..974
                     /locus_tag="MOX77_004281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head completion/stabilization protein"
                     /protein_id="HCA3359666.1"
                     /translation="MKFVAPEQAPEQAEIIRNTPFWPDVDLSEFRSMMRTDGTVTQPR
                     LKQVALSAISEVNAELYEFRRRQQMLGYASLAEVPAEQLDGKSERIQHYFNAVYCWAR
                     AMLNERYQDYDATASGVKRGEELAEASGDLWRDARWAISRVQDAPHCTVELI"
     gene            974..1177
                     /locus_tag="MOX77_004282"
     CDS             974..1177
                     /locus_tag="MOX77_004282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail protein X"
                     /protein_id="HCA3359667.1"
                     /translation="MKVRAHQYDTVDALCWRHYGRTQGVTEQVLKANPGLAEYGPFLP
                     HGLQVELPDIPTTTTVQTVQLWD"
     gene            1181..1396
                     /locus_tag="MOX77_004283"
     CDS             1181..1396
                     /locus_tag="MOX77_004283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3359668.1"
                     /translation="MTLERISAFITYCIAVVLAWLGDLSIKDASTLGGLMIGVLMLAI
                     NWYYKHKAYQLLRDGQISREDYESINR"
     gene            1377..1889
                     /locus_tag="MOX77_004284"
     CDS             1377..1889
                     /locus_tag="MOX77_004284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001069913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme"
                     /protein_id="HCA3359669.1"
                     /translation="MNPSIVKRCLVGAVLAIAATLPGFQQLHTSVEGLKLIADYEGCR
                     LQPYQCSAGVWTDGIGNTSGVIPGKTITERQAAEGLISNVLRVERALERCVKQQPPQK
                     VYDAAVSFAFNVGTGNACSSTLVKLLNQRRWADACRQLPRWVYVKGVFNQGLDNRRAR
                     EMAWCLQGAN"
     gene            1891..2268
                     /locus_tag="MOX77_004285"
     CDS             1891..2268
                     /locus_tag="MOX77_004285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000730949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3359670.1"
                     /translation="MKKKLISGLFLMLWMALLIAAMVYPQGIFPVLAASGVWVACLLT
                     WAVIPVALAALIKNGPLWQELRASLLKTITRKENVFTSWVMRLLIVVSLAWTGWAITL
                     VFYLLTVIAFWITRNQMAQQVAA"
     gene            2265..2693
                     /locus_tag="MOX77_004286"
     CDS             2265..2693
                     /locus_tag="MOX77_004286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001341071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysB family phage lysis regulatory protein"
                     /protein_id="HCA3359671.1"
                     /translation="MNRLLLVVLALLLAALGWQTWRLADASQTISTQADELQSKSQAL
                     AKSNSQLISLSILTETNNREQARLYAEAEQTSAQLRQRQRRIEELKRENEDLRHWADT
                     PLPADIIRLRERPALTGGAAYRQWLSASDAVSAGAGSTAH"
     gene            2789..3220
                     /locus_tag="MOX77_004287"
     CDS             2789..3220
                     /locus_tag="MOX77_004287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCA3359672.1"
                     /translation="MNKPQSLRHALNKAVPYVRNNPDKLHLFVDNGSLVATGASSMSW
                     EYRYTLNVVIEDFSGDQNLLMAPVLLWLRDNQPDAINNPALREKLFTFDVDILRNDVC
                     DISLNLQLTERVLVSTDGSVSSVEAVAEPDEPEEMWTVKRG"
     gene            3213..3659
                     /locus_tag="MOX77_004288"
     CDS             3213..3659
                     /locus_tag="MOX77_004288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HCA3359673.1"
                     /translation="MAELQKVDDWLSALLANLEPATRSRMMRQLAQELRRTQQQNIRM
                     QRNPDGSSYEPRRVTARSKKGRIKRQMFAKLRTTKYLKTAASADSASVQFEGKVQRIA
                     RVHHYGLRDRVSRKGPEVRYAERRLLGVNDDVEAMTRDMILQWLAG"
     gene            3728..4306
                     /locus_tag="MOX77_004289"
     CDS             3728..4306
                     /locus_tag="MOX77_004289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HCA3359674.1"
                     /translation="MNAQLTEIMRLITNLIRTGVVTEVDREHWLCRVKTGDLETNWIN
                     WLTLRAGNARTWWKPSEGEQVVLLSLGGNLETAFALPAVYSNQFAPPSTSADACVTEH
                     PDGGWFEYEPATGRWYVRGIKSMVIEAADNITMKTSEFVLEADRTRINSEVVINGGVT
                     QGGGAMSSNGIVVDAHQHTGVLKGGDTTGGPV"
     gene            4303..4662
                     /locus_tag="MOX77_004290"
     CDS             4303..4662
                     /locus_tag="MOX77_004290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013098787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPW/gp25 family protein"
                     /protein_id="HCA3359675.1"
                     /translation="MTLYSGMNNTSGKVITDIDHLRQSVRDILLTPQGSRIARREYGS
                     LLSSLIDQPQNPALRLQVMSAVYVALSRWEPRLTLDSITINSHFDGSMVVELTGRRNN
                     GVPVSLSVSTGAENGSD"
     gene            4649..>5115
                     /locus_tag="MOX77_004291"
     CDS             4649..>5115
                     /locus_tag="MOX77_004291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
                     /protein_id="HCA3359676.1"
                     /translation="MAVIDLSQLPAPQIVDVPDFDTLLAERKAEFVALHPKDEQEAVS
                     RTLELESEPVTKLLQENAYRELLLRQRINEAAQAVMAAYAIGSDLDQLAANYNVKRLT
                     VTPADNDAVPPVAAVMESDEALRLRVPAAFEGLSVAGPTAAYEFHARSADGRVA"
BASE COUNT         1146 a         1322 c         1577 g         1070 t
ORIGIN      
        1 caggatgacg tgctgatgta cgtgatgctg tggcgcattg atgccggaga ttatgccggg
       61 gcgctggaga tcgggcgtca tgccctgcgt catggctggg tgatgccgct gggtaaccgc
      121 aatgtgcaga ccgtgctggc agaggaaatg gcagatgcag cgcagagcgc aatgcttgcc
      181 gccaccggct ttgatgccga tctgttgctg cagacgctgg agctgacaga cggtctggat
      241 atgccggacc agtcacgggc gcgtctgcat aaagcgattg gcgctgttct gagtgaaagc
      301 aatccggctt ccgcccttaa tcatctcaac catgcgttac agctcgatcc ccgctgtggc
      361 gtgaaaaaag acaaacagca gctggagcgc agactgcgca atgacagccg ctgacagaac
      421 gtgcccccgc gcacgggcgg cacggggtgg cgaaaggcac tgccacatca aaaccccgtc
      481 caccgccctt tatttcagga gaaagcagca tgaagtttgt tgcgccagaa caggcaccgg
      541 aacaggcgga aatcatcaga aatacgccgt tctggcctga tgtggacctg tcggagtttc
      601 gcagcatgat gcgcactgat ggcacggtga cgcagccgcg tttaaagcag gttgcgctgt
      661 cggcaatttc ggaggtcaac gcagagctgt atgagtttcg cagacgccag cagatgctgg
      721 ggtatgcctc gctggcagaa gtcccggcgg aacaactgga cggcaaaagc gagcgcattc
      781 agcactattt caacgcggtt tactgctggg cacgcgccat gctcaacgaa cgttaccagg
      841 actatgacgc cacggcatcc ggtgtgaagc ggggcgaaga actggcagaa gccagcggtg
      901 atttgtggcg tgacgcccgc tgggccatca gccgggtgca ggatgcgccg cactgcacag
      961 tggagcttat ctgatgaaag tgcgtgcgca tcagtatgac acggtggacg cgctttgctg
     1021 gcgtcattac gggcgcacgc agggtgtcac ggagcaggta ctgaaggcaa atccggggct
     1081 tgccgaatac ggcccctttt tacctcacgg gctgcaggtg gagctgccgg acattccgac
     1141 caccaccacc gtgcagaccg tccagctatg ggactgaatt atgacgcttg agcgaatcag
     1201 cgcctttatc acgtattgca tcgccgtcgt gctggcctgg ctgggcgatt tgtccatcaa
     1261 ggatgcctca acgctgggcg gcctgatgat tggtgtgctg atgctggcta tcaactggta
     1321 ctacaaacac aaagcctacc agcttctgcg cgacgggcag atctcgcggg aggactatga
     1381 atccatcaat cgttaaacgc tgccttgtcg gggccgtgct ggctattgct gccacgctgc
     1441 cgggttttca gcagcttcac acctccgtgg aggggctgaa actgattgcc gattacgaag
     1501 gttgtcgtct gcagccgtat cagtgcagcg cgggtgtctg gaccgacggc attggtaata
     1561 cgtcaggcgt cattcccggc aaaaccatta cggagcgaca ggcagcagaa gggctgatct
     1621 ccaacgtgct gcgtgtggag cgggcgctgg aaaggtgtgt gaagcaacag ccgccgcaga
     1681 aggtgtatga cgctgcggtg tcgtttgcct tcaacgtggg aacgggcaat gcctgcagtt
     1741 ccacactggt gaaattactc aatcagcggc gctgggcgga tgcgtgccga cagttgccgc
     1801 gctgggttta tgtgaaaggt gtttttaatc aggggctgga taaccgccgt gcgcgggaga
     1861 tggcctggtg cttacaggga gcaaactgaa atgaaaaaga aattaatcag cggactgttt
     1921 ctgatgttat ggatggcgct gttaatcgca gcaatggtgt atccgcaggg gatttttccg
     1981 gtactggcag cgtccggcgt ttgggtagcc tgtttgctga catgggcggt aattccggta
     2041 gcactggctg cgttaattaa gaatggcccg ctctggcagg agttaagggc atctttgctg
     2101 aagacaatta cccgaaaaga aaacgtattt accagttggg tgatgcgatt gctgattgtt
     2161 gtaagtctcg cctggacggg gtgggctatt accctggtct tttatctact gaccgttatt
     2221 gccttctgga tcacccgtaa tcagatggcg caacaggtag cagcatgaac cggttgctgc
     2281 tggttgtgct ggcgttatta ctggcggcgc tgggctggca gacgtggcgg ctggctgatg
     2341 ccagccagac catcagcacg caggcagacg agctgcagag caaaagccag gcactggcaa
     2401 agagcaacag ccagcttatc agcctgtcca ttctgactga aaccaataac cgggagcagg
     2461 cgcggctcta tgccgaagca gaacagacca gcgcacagct gagacaacga caacgccgga
     2521 tcgaggaact gaaacgtgag aacgaggatt tacgccactg ggctgatact cctttgcctg
     2581 ctgacattat ccggctgcgg gaacgtccgg cactcaccgg aggtgcagct taccgtcagt
     2641 ggttgtccgc gagtgacgcc gtgtcggctg gagcaggcag caccgcgcac taacggtgat
     2701 ctgaatgcgt tgctggatga aacggaggcc gcctgggcgg tctgtgcaga caaagtggac
     2761 atgattattg cgtgtcagga gcgaaacagt gaacaaacca caatccctgc gccacgccct
     2821 caataaagcg gtgccttatg tccgcaataa cccggacaaa ctgcatctgt ttgtggataa
     2881 cggttcgctg gttgccacgg gggccagctc catgtcatgg gagtaccgct ataccctgaa
     2941 cgtggtgata gaggatttca gcggcgacca gaatctgctg atggccccgg ttttactgtg
     3001 gcttcgggat aaccagcccg atgccatcaa taacccggcg ttacgggaaa agctattcac
     3061 ctttgatgtg gatattttgc gcaacgatgt ctgtgatatc agccttaatc tgcaactgac
     3121 ggaacgtgtg ctggtcagca ctgacggcag tgtgtcgagc gttgaagctg tagcagaacc
     3181 cgatgaacct gaagaaatgt ggacggtgaa acgtggctga actgcagaag gtggacgact
     3241 ggctgagtgc cttgctggcg aatctggaac cagccacgag aagccgcatg atgcgccagc
     3301 tggcgcagga actgcgccgg acacagcagc agaatatcag gatgcagcgc aatccagatg
     3361 gcagcagtta tgaaccgcgc agggtaacag cacgcagcaa gaaagggcgc atcaaacgtc
     3421 agatgtttgc aaagctgcgc accacaaaat acctgaaaac tgccgccagc gccgactctg
     3481 ccagtgtaca gtttgaaggc aaggtgcagc gtattgcccg tgttcaccat tacggcctgc
     3541 gtgatcgcgt cagtcgcaaa ggaccggagg tccgttacgc agagcgtcgc ctgctgggtg
     3601 taaatgatga tgttgaggca atgacccgcg acatgattct gcaatggctg gcggggtgat
     3661 ctttgtatca gcactgatac aagttgcagc actgccgcct ttcttcccct gatggcaacc
     3721 tttccctatg aacgcacaat taaccgaaat catgcgcctt atcaccaatc tgatccgcac
     3781 tggtgtagtc accgaagtgg accgggaaca ctggctttgt cgggtgaaaa cgggcgacct
     3841 tgaaaccaac tggattaact ggctgacgct gcgcgcgggt aatgcccgca catggtggaa
     3901 accatcggaa ggtgagcagg tggtgctact gagtctgggc ggcaatctgg aaactgcctt
     3961 tgcgctgccc gctgtctatt cgaatcagtt cgcaccaccg tcgacgtcgg cagacgcctg
     4021 cgtgacagaa catcctgacg gtggctggtt tgaatacgaa cccgccaccg ggcgctggta
     4081 tgtcaggggc atcaaatcaa tggtcattga ggccgctgac aacatcacca tgaaaaccag
     4141 tgagtttgta ctggaggctg accgcacgcg cattaacagc gaagtggtga tcaatggtgg
     4201 cgttacccag ggcggcggag cgatgagttc taacgggatc gtggttgatg cgcatcagca
     4261 tactggcgtc ctgaaaggcg gcgatacaac cggaggcccg gtatgacgct ttatagcggg
     4321 atgaacaata ccagcggcaa agtcattact gatattgacc atctgcgcca gtcggtgcgg
     4381 gacattctgc tgacgccgca gggtagccgc attgctcgtc gtgaatatgg ttccctgctg
     4441 tcgtcgctaa tagaccagcc acaaaatccg gcattacgcc tgcaggtcat gtcggcagtg
     4501 tatgtggcgc tgagtcgctg ggagccacgg ctgacgctgg attccatcac catcaacagc
     4561 cattttgacg gttcaatggt ggtggagctg accgggcggc gtaataacgg tgtacctgtt
     4621 tccctttccg tatcaacagg agcagagaat ggcagtgatt gacctttcgc agttgcctgc
     4681 gccgcagatt gtggatgtgc cggactttga tacgttgctt gccgaacgca aggcagaatt
     4741 tgtggcgctt catccgaaag atgagcagga agcagtgagc cgcacactgg aactggaatc
     4801 tgaacccgtc accaaattgt tgcaggagaa cgcttatcgt gagttgcttc tgcgccagcg
     4861 cattaacgaa gccgcgcagg cggtgatggc ggcttatgcc atagggagcg atctggacca
     4921 gctcgctgcc aattacaacg tgaaacgcct gacggtgacg cctgctgata atgacgctgt
     4981 gccgcccgtc gcggctgtga tggaaagtga tgaagcgtta cgcctgcgtg tgcctgcggc
     5041 ttttgaaggg ctttcggttg cggggccaac tgccgcttat gaatttcatg cccgaagcgc
     5101 cgacggtcgg gtggc
//
LOCUS       DAGWFR010000238         4933 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.241, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000238 DAGWFR010000000
VERSION     DAGWFR010000238.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4933)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4933)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4933
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.241"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..616)
                     /gene="dapF"
                     /locus_tag="MOX77_004292"
     CDS             complement(<1..616)
                     /gene="dapF"
                     /locus_tag="MOX77_004292"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HCA3359677.1"
                     /translation="MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLSDRHLGVGFDQ
                     LLVVEPPYDPELDFHYRIFNADGSEVSQCGNGARCFARFVRLKGLTNKRDIRVSTANG
                     RMVLSVTEDELVRVNMGEPNFEPAQVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHC
                     VIQVDNVDTAAVETLGPVLESHERFPERANIGFMQVVRREHIRLR"
     gene            complement(653..856)
                     /locus_tag="MOX77_004293"
     CDS             complement(653..856)
                     /locus_tag="MOX77_004293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HCA3359678.1"
                     /translation="MKNVFKTLAVLLTLFSLTGCGLKGPLYFPPADKNAPPPTKKVDS
                     QTQSTMPDKNDRATGDGPSQVNY"
     gene            1042..3051
                     /locus_tag="MOX77_004294"
     CDS             1042..3051
                     /locus_tag="MOX77_004294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001200019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3359679.1"
                     /translation="MQYRNLFCLFSLSLLLPPAWGCRLSEPPHNVYQRQGSGVVYLQP
                     EEENNLSLPEVNFKRLRRLPNSLINPATQDEWDREPPLTDLTTDYVHTSAQAIFPRFS
                     YYSDGRVILYGGKIMRNPPGTPSVDVASFRAFGKVGVDKNSLYDEGKRTDDNGGENRV
                     NLQSLRKVEFSSQWKPDLLGLTLRDDRFLYVDGHRLSDPDSFTVLAQKSWDQRGKFSA
                     TFNPCIAVPFGPWDTLARTRTKIIINGDQLDADPDTFSVVRWMPGSLLTWRDKNGLHR
                     HVLNQNNLNWDMQIEKHCDAFNLQEKRVLWRKGPGCKFAEIPGLDPEQFHPLSNAVAQ
                     SQDRLYAIRKTEFGENQLDVVTLDNPNLVIDKRFNAGRYHGYLLTKTRSDFKEEDGLQ
                     VFESAGPLILMDYHVPDETEAHLGDSPHYKKWYARDDRYVYAFDGAQLWRYPTPNPKA
                     LRMKWQTTHSGYGYWVDYRIAQLDGALMEDGSFIATGIPRDPSVKTAYVKTDGTFDIG
                     KTAVRWRKVLSPDGEWGRWQTIPNVDPSQFHLVNDRIAQYKDRLYIARLSPFGEDQLE
                     TLELDSTAPFLNQKINAGKEHGYFMHNSQQAQDIQVFSINGPLKVTERFAYDNRYVYT
                     WIGSQIYRTASLCPDKTLNLNQNMYSDNKDIIIITQAQECQKSRR"
     gene            3030..3419
                     /locus_tag="MOX77_004295"
     CDS             3030..3419
                     /locus_tag="MOX77_004295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3021 family protein"
                     /protein_id="HCA3359680.1"
                     /translation="MPKITSLSRFARLIKHLKNALRGVGIGSCIYVIVESVMHGTING
                     VEAAGVLTISAVLGLLSALLDIKAKPRAPLILLHFLLCGGCVALMVAMLSVLNHFPVN
                     ASVILITSALFIVIYLPLGFILYRSQR"
     gene            3489..3809
                     /gene="cyaY"
                     /locus_tag="MOX77_004296"
     CDS             3489..3809
                     /gene="cyaY"
                     /locus_tag="MOX77_004296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000999950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron donor protein CyaY"
                     /protein_id="HCA3359681.1"
                     /translation="MNDSEFHRLADALWLTIEERLDNWDGDSDIDCEINGGVLTLSFE
                     NGSKIIINRQEPLHQVWLATKQGGYHFDLKGDEWVCDRSGETFWDLLEQAATQQAGEK
                     VSFR"
     gene            complement(3881..4243)
                     /locus_tag="MOX77_004297"
     CDS             complement(3881..4243)
                     /locus_tag="MOX77_004297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3359682.1"
                     /translation="MFFVITHHIDVLPLATLPTHETCPYCNNQDVWLIIRQKRTRTCG
                     LSQARKRDKFGLAICNHCSNEIKEKRWSPALRQLFTEQKSLFNLTFWQRYGFWVGWLS
                     VWPALFLATWLYFTFRGW"
     gene            complement(4255..4797)
                     /locus_tag="MOX77_004298"
     CDS             complement(4255..4797)
                     /locus_tag="MOX77_004298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3359683.1"
                     /translation="MDVFIKGYYMSINNPILIYVNKKRQIKLALFYSVLAIVFMMSLF
                     LNYSIMLKMMCVFFIILMIAGASAYWYSAFSGKPQLTLNQEGVTLHTTRLPIVYWHEI
                     DYVGERVSDNTPVLAIFVKDIELYCQRITNEKMRNNFLSLLNKHGSNRVMNISLNDLD
                     YDSDELQDIFKMAVARNLEQ"
BASE COUNT         1296 a         1236 c         1156 g         1245 t
ORIGIN      
        1 ctcgcagccg gatatgctca cgtcttacaa cctgcataaa accaatgttg gcgcgttccg
       61 gaaaacgctc atggctttcc agaaccggcc ccagtgtttc aacggccgcc gtgtcgacgt
      121 tatcaacctg aatgacacag tgcggattgc ccattgaaac cacgccgcac agtatggtct
      181 gttccgccgc tcgcataata tacgtctttt ccgctttgtt ggcgcgaaaa ggcacctgcg
      241 cgggttcaaa gtttggctcc cccatgttca cccgcaccag ttcatcttcc gtgacgctca
      301 gtaccatccg gccattcgcg gtactgaccc gaatatcgcg tttattggtt agccctttca
      361 ggcgaacaaa tcgcgcgaaa cagcgcgcgc cattgccgca ctgcgagact tcactgccgt
      421 cggcgttgaa gatgcggtaa tgaaagtcca actcaggatc atagggcggc tcaaccacca
      481 gcagctgatc gaaccctacg cccaagtgtc tgtcggatag ccgacgaatc agttccggcg
      541 aaaaaaagac attctgcgtt accgcgtcga cgaccataaa atcgttgcca aggccatgca
      601 ttttagagaa ttgcatcatt cactccgttc acgcggggac agaaaactat cctcagtaat
      661 tgacctggga cgggccatct cccgttgcgc gatcgttctt atcgggcatc gtggactgcg
      721 tttgcgaatc gacttttttc gtcggcggcg gcgcattttt atcggctggc gggaaataaa
      781 gcggcccttt caaaccgcag cccgtcaggc tgaacagagt cagaagtaca gcgagtgtct
      841 taaacacgtt tttcattatg gattgcctgt aagttcatgc tttctatttt ctatcatcgc
      901 aggagaagga gtaaaagcaa gcgtttaggg gctctttata aaatctgaaa agcggcgcgt
      961 tgccatgatt attgcgcatt tacatcagga aacatgcttt gctcatcact ttaggtttac
     1021 gtaccacgtc cggatgacct tatgcaatat cgtaatttgt tttgcctttt ttcgctttca
     1081 cttctgctgc ctcccgcttg gggatgccgg ctgagtgaac ctccgcacaa tgtttatcaa
     1141 cggcaaggca gcggcgtggt ttatctccag ccagaagagg agaacaatct ttcgttgccg
     1201 gaggtgaatt tcaaacgcct gcgtcggtta cccaattcat tgattaaccc ggcaactcag
     1261 gatgagtggg acagggaacc gccgctcacc gacctgacga ccgattacgt tcataccagt
     1321 gcgcaggcta tcttcccgcg cttttcctac tacagcgacg gacgcgttat tctgtacggt
     1381 ggaaaaatca tgcgtaatcc gccggggacg ccatcggtag atgtcgcctc atttcgcgcc
     1441 tttggcaaag tcggcgttga taaaaatagt ctctatgacg aaggcaaacg aacggatgac
     1501 aacggcggcg aaaaccgcgt taatttacag tcattgcgta aggttgaatt tagcagccag
     1561 tggaaaccag acctgttggg cttgacgctg cgcgacgatc gctttcttta tgtcgacggg
     1621 catcgcctga gcgacccgga cagtttcacc gttctggcgc aaaagtcctg ggatcagcgc
     1681 ggtaaatttt ccgccacatt taatccttgt atcgccgtcc cctttggtcc ctgggatacg
     1741 ctggcccgca cacgcaccaa aatcatcatc aacggcgacc aactggacgc cgacccagac
     1801 accttttccg tggtgcgctg gatgcccggt tctctattga cctggcgcga taaaaacggc
     1861 ttgcaccgtc acgttctcaa ccagaacaat ctgaattggg acatgcaaat tgaaaaacac
     1921 tgtgatgcgt tcaacctgca ggaaaaacgc gtgctgtggc gtaaaggacc gggatgcaaa
     1981 tttgccgaaa tccccggcct tgacccagaa cagtttcatc cgctcagtaa tgcggtggcg
     2041 cagtctcagg atcggcttta tgccatcagg aaaacggaat tcggcgaaaa ccaactggat
     2101 gtcgtcacgc tggataaccc aaatctggta atagacaagc gttttaatgc cgggcggtat
     2161 cacggttatt tactcactaa aacgcgatcc gactttaagg aagaagacgg attgcaggta
     2221 ttcgagtcgg ctggcccgct tattctgatg gactatcacg ttccggacga gacagaagcg
     2281 catctgggcg acagcccaca ttacaaaaaa tggtacgcac gcgacgatcg ctatgtttac
     2341 gcgtttgatg gcgctcaact gtggcgctat cccacgccca atcccaaagc tctacgcatg
     2401 aaatggcaaa caacacactc aggatacggc tattgggtgg attaccgcat agcccagtta
     2461 gatggcgctc tcatggagga tggctctttt atcgccacgg gtatcccgcg cgatccttcc
     2521 gtaaaaacag cctatgttaa aaccgatggc acctttgaca tcggcaaaac agcggttcgc
     2581 tggcgcaagg ttctgtcacc tgacggtgag tggggtcgtt ggcaaaccat tcccaacgtt
     2641 gacccgagtc agtttcatct ggttaacgat cgcatcgcgc aatataagga ccggctatac
     2701 attgcgaggc tctcaccttt tggcgaagac cagttggaaa cgctggaact ggatagcaca
     2761 gcccccttcc tgaaccagaa aattaacgcc ggaaaagagc acggctactt tatgcataat
     2821 agccagcagg ctcaggatat tcaggtcttt agcatcaatg ggccgctaaa agtcaccgag
     2881 cgttttgcgt atgacaaccg ctatgtttat acgtggattg gtagccagat ttaccgaaca
     2941 gcatccctct gcccggataa gacgctcaat ttgaatcaga atatgtactc cgacaataaa
     3001 gacatcatca tcataacgca ggcgcaggaa tgccaaaaat cacgtcgcta agccgttttg
     3061 cgcgcttgat taaacatttg aaaaacgccc ttcggggcgt ggggatcggt tcatgcattt
     3121 acgtcattgt tgaaagcgtt atgcacggca cgataaacgg tgttgaagct gccggagtcc
     3181 tgacgataag cgcggtactc ggtctgctta gcgctctttt ggatatcaaa gcaaagccgc
     3241 gcgccccctt aatcctgttg cattttctcc tctgcggcgg ctgcgtcgca ctgatggtgg
     3301 caatgctgtc ggttctgaac catttcccgg ttaatgcgtc cgtcatactt atcaccagtg
     3361 cgctatttat cgtcatttat ctaccgctgg gttttatcct ttaccgctca caacggtaat
     3421 tcgtatcggt tccagaagct gacgcttccc cttatactgg cgctatcact caatagcggg
     3481 ataaaacaat gaacgacagt gaatttcatc gcctggctga cgccctgtgg ctcaccattg
     3541 aagaacgcct tgataactgg gacggcgaca gcgatatcga ctgtgaaatc aacggcggcg
     3601 tgctgaccct cagctttgag aacggcagta agatcattat taaccgtcag gagccgttgc
     3661 accaggtgtg gctggcaacc aaacagggcg gctatcattt cgatctgaaa ggcgacgagt
     3721 gggtttgcga tcgcagcggc gaaacgttct gggatctgct ggagcaggcg gcgacgcagc
     3781 aggcgggtga aaaggtgagt ttccgttaag ttttcaattc cgcaggagag ccagaagaat
     3841 agcgctttcc tgcgtatatt taacgagata tgcggtcgta ttaccaaccc cggaatgtga
     3901 aatacagcca ggttgccaga aacaacgcgg gccatacact caaccaacca acccaaaaac
     3961 cgtagcgttg ccaaaaggtt aggttaaata gtgacttctg ctcggtaaaa agttgacgta
     4021 acgctggtga ccaacgtttt tccttgattt cattgctgca atgattgcat atcgctaaac
     4081 caaacttatc tctttttctc gcttgagaca gaccacatgt acgggtcctt ttttggcgaa
     4141 taatcaacca tacatcctga ttattacaat aagggcatgt ttcatgtgtg ggtagggttg
     4201 ccagaggcag cacatcaata tggtgagtaa taacaaaaaa catatatctc taccctattg
     4261 ttccaggttt ctggcaacag ccattttaaa aatatcctgt aactcatctg aatcataatc
     4321 gagatcgttt agagagatat tcatcacgcg attacttcca tgcttattca ataatgacag
     4381 aaaattatta cgcattttct cattagtaat tcgctgacaa taaagctcaa tatctttgac
     4441 aaaaatggcc agcacaggcg tattatcgct aacacgctca ccaacatagt cgatttcatg
     4501 ccagtaaact attggtagcc tggttgtgtg taatgttact ccctcctggt tcaacgttag
     4561 ctgtggcttt cctgaaaagg cggagtacca gtaagcactt gcgcctgcta tcatgaggat
     4621 tatgaaaaaa acacacatca tctttagcat aatactataa tttagaaaga ggctcatcat
     4681 aaaaactata gctaacactg aataaaacag agctaatttt atttgtcgtt tcttattcac
     4741 gtaaataaga atagggttgt ttattgacat ataatatcct tttataaaaa catccataag
     4801 aaaccattaa agagcttttg tttctaatat agtttttcaa aacatattta cgaaaacaat
     4861 gaaggacgcg atagcatttt gaacggtctg aatattacta cataaattgt ataagaaaaa
     4921 atattatcta aac
//
LOCUS       DAGWFR010000239         4930 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.242, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000239 DAGWFR010000000
VERSION     DAGWFR010000239.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4930)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4930)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4930
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.242"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..756
                     /gene="pdxA"
                     /locus_tag="MOX77_004299"
     CDS             <1..756
                     /gene="pdxA"
                     /locus_tag="MOX77_004299"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HCA3359684.1"
                     /translation="SLRAPAIPGQLTVENGPYVVETLARACDGCLNGEFAALITGPVH
                     KGVINDAGIPFTGHTEFFEERSQAKKVVMMLATEELRVALATTHLPLRAIADAITPAL
                     LHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHMGTEEIDTIIPVLDELRAQGM
                     KLNGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVD
                     HGTALELAGRGKADVGSFITALNLAIKMIVNTQ"
     gene            753..1574
                     /gene="rsmA"
                     /locus_tag="MOX77_004300"
     CDS             753..1574
                     /gene="rsmA"
                     /locus_tag="MOX77_004300"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HCA3359685.1"
                     /translation="MNNRVHQGHLARKRFGQNFLNDRFVIDSIVSAINPQKGQAMVEI
                     GPGLAALTEPVGERLDKLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELSA
                     QLGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRL
                     SVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPYPVKDIRVLSRITTEAF
                     NQRRKTIRNSLGNLFSVETLTEMGIDPAMRAENISVAQYCQMANYLSENAPLKES"
     gene            1577..1954
                     /gene="apaG"
                     /locus_tag="MOX77_004301"
     CDS             1577..1954
                     /gene="apaG"
                     /locus_tag="MOX77_004301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Co2+/Mg2+ efflux protein ApaG"
                     /protein_id="HCA3359686.1"
                     /translation="MINSPRVCIQVQSVYIEAQSSPDDERYVFAYTVTIRNLGRAPVQ
                     LLGRYWLITNGHGRETEVQGKGVVGVQPRIAPGEEYQYTGGAVIETPLGTMQGHYEMI
                     DENGDAFTIDIPVFRLAVPTLIH"
     gene            1965..2813
                     /gene="apaH"
                     /locus_tag="MOX77_004302"
     CDS             1965..2813
                     /gene="apaH"
                     /locus_tag="MOX77_004302"
                     /EC_number="3.6.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bis(5'-nucleosyl)-tetraphosphatase (symmetrical)
                     ApaH"
                     /protein_id="HCA3359687.1"
                     /translation="MATYLIGDVHGCYDELIALLQQVEFTPDTDTLWLTGDLVARGPG
                     SLDVLRYVKSLGNSVRLVLGNHDLHLLAVFAGISRNKPKDRLTPLLEAPDADELLNWL
                     RRQPLLQVDEEKKLVMAHAGITPQWDLQTAKECARDVEAVLSSDSYPFFLDAMYGDMP
                     NNWSPELSGLARLRFITNAFTRMRYCFPNGQLDMYSKASPENAPAPLKPWFAIPGPVS
                     EAYSIAFGHWASLEGKGTPEGIYALDTGCCWGGELTCLRWEDKQYFVQPSNRQMDMGE
                     GEAVNA"
     gene            complement(2909..3388)
                     /gene="folA"
                     /locus_tag="MOX77_004303"
     CDS             complement(2909..3388)
                     /gene="folA"
                     /locus_tag="MOX77_004303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020456510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 3 dihydrofolate reductase"
                     /protein_id="HCA3359688.1"
                     /translation="MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVVMGR
                     HTWESIGRPLPGRKNIIISSQPGTDDRVQWVKSVDEAIAACGDAPEIMVIGGGRVYEQ
                     FLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR"
     gene            complement(3587..>4930)
                     /gene="kefC"
                     /locus_tag="MOX77_004304"
     CDS             complement(3587..>4930)
                     /gene="kefC"
                     /locus_tag="MOX77_004304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-regulated potassium-efflux system
                     protein KefC"
                     /protein_id="HCA3359689.1"
                     /translation="ASTTLGAFALSALKVAGALALVVLLGRYVTRPALRFVARSGLRE
                     VFSAVALFLVFGFGLLLEEVGLSMAMGAFLAGVLLASSEYRHALESDIEPFKGLLLGL
                     FFIGVGMSIDFGTLVENPLRILLLLAGFLAIKIVMLWLVARTLGVPAKQRRWFAVLLG
                     QGSEFAFVVFGAAQMADVLEPEWAKALTLAVALSMAATPIFLVLLTRMEKTATGEARE
                     ADEIDEEQPRVIVAGFGRFGQIAGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGD
                     ATRMDLLESAGAAKAEVLINAIDDPQTNLQLSELVKTHFPHLQIIARARDVDHYIRLR
                     QAGVAMPERETFEGALKSGRQALEALGLGRYEARERADLFCHFNTRMVEEMAKGENDP
                     LSRAAAYKRTSAMLSEIITEDREHLSLIQRHGWQGTAEGKHSGKAADEPEVKPSI"
BASE COUNT         1142 a         1413 c         1290 g         1085 t
ORIGIN      
        1 tcgctgcgcg cgcctgccat ccccggtcag ttgacggtag aaaatggccc ctacgtggta
       61 gagacgctgg cgcgagcgtg tgatggctgt ctgaacggtg aatttgccgc gctgatcaca
      121 ggccccgtgc acaaaggcgt tattaacgac gcaggcattc cgtttaccgg tcataccgag
      181 tttttcgaag agcgttcgca ggcgaaaaaa gtcgtgatga tgctggcaac cgaagaactt
      241 cgcgtggcgc tggcgaccac gcatctgccg ctacgggcga ttgcagacgc catcacccct
      301 gcgcttttgc acgaagtgat tgctattttg catcacgatt tgcggaccaa atttggtatt
      361 gccgaaccgc gcattcttgt ctgtggcctg aatccgcacg cgggcgaagg cggtcatatg
      421 ggcacggaag agatagacac catcattccg gtgctcgacg agctgcgggc gcaggggatg
      481 aaactcaacg ggccgctacc tgctgatacg ctgtttcagc ccaaatatct cgataatgcc
      541 gacgcggtgc tggcaatgta ccacgatcag ggcctgcccg tgctaaaata ccagggattc
      601 ggtcggggag tgaatattac gctcggccta ccttttattc gaacctccgt tgatcacggc
      661 accgcgcttg aactggcggg ccgaggaaaa gcggatgtcg gcagttttat tacggcgctt
      721 aatctcgcca tcaaaatgat tgttaatacc caatgaataa tcgagtccat cagggccatt
      781 tagcccgtaa acgcttcggg caaaactttc tcaacgatcg gtttgtgatc gacagtattg
      841 tttctgctat taatccgcaa aaaggccagg cgatggttga aatcggcccc ggtctggcgg
      901 cgctgacgga gccggtcggc gaacgactgg ataagctcac ggtcattgaa cttgaccgcg
      961 atctggcggc gcgtttgcaa acccatccgt ttttagggcc gaagctgact atttatcagc
     1021 aggacgccat gaccatgaac tttggcgaac tgtctgcgca gttgggccag ccgctgcgtg
     1081 tgttcggcaa tctgccctat aatatctcca ccccgctgat gttccatctc tttagctata
     1141 ctgatgccat tgccgacatg cactttatgt tgcaaaaaga agtggtaaat cgtctggttg
     1201 cagggccgaa cagcaaagcg tatggtcgtt taagcgtgat ggcgcaatat tactgtcagg
     1261 tgatcccggt gcttgaagtg ccgccatccg ccttcacgcc gccgcccaaa gtggactccg
     1321 ccgtggtgcg tctggttcca cacgcaacga tgccttaccc ggttaaagat attcgcgtgt
     1381 tgagccgtat taccaccgag gcctttaacc agcgccgtaa aacgatccgt aatagtctcg
     1441 gcaatctttt tagcgttgag acgttgacgg aaatgggtat tgacccggca atgcgcgcgg
     1501 aaaatatctc tgtcgcgcag tactgccaga tggccaacta tctgtcggaa aacgcgcctt
     1561 tgaaggagag ttaaacatga tcaattcgcc cagagtgtgt attcaggtgc aaagcgtcta
     1621 cattgaggcg caatcctcac ctgacgatga acgttacgtt tttgcctata ccgtaaccat
     1681 ccgcaatctg ggtcgggcgc cagtgcagct attgggccgc tactggctga ttaccaatgg
     1741 tcatggccgt gaaactgaag tccagggcaa aggtgtggtt ggcgtccagc cgcgcattgc
     1801 gcctggcgaa gagtatcagt acaccggcgg cgcggtaatt gaaacgccgc tgggcaccat
     1861 gcagggtcat tacgaaatga tcgatgaaaa tggcgacgcc tttaccatcg acattcccgt
     1921 gtttcgactc gccgtcccta cactcattca ctaaaattat aacaatggca acttatctca
     1981 tcggcgacgt tcacggttgc tacgacgaac tgatcgcctt attacagcaa gtggaattta
     2041 cgccagatac agacactcta tggctgactg gcgatttggt cgcccgcggt cccggttcgc
     2101 tggacgtgtt acgctacgtc aaatcgcttg gcaatagcgt gcgtttggtg ctggggaatc
     2161 acgatttaca cctgttggcc gtattcgccg ggattagccg caacaaacct aaagaccggc
     2221 tgaccccgct tcttgaagcg ccggacgccg atgagctgtt gaattggtta cgccgtcagc
     2281 cgctgttgca ggtagatgaa gagaaaaagc tggtcatggc gcatgcgggt attaccccac
     2341 agtgggattt gcagacggca aaagagtgcg cccgcgatgt tgaagcggtg ctgtcgagcg
     2401 actcgtaccc gtttttcctc gacgcgatgt atggcgatat gccgaataac tggtcgccgg
     2461 agttaagcgg tctggcgcgg ctacgcttta ttactaatgc ctttacccgt atgcgttact
     2521 gctttcctaa cggtcaactg gatatgtaca gcaaagcgtc gccggaaaat gcccctgcgc
     2581 cgctgaagcc gtggttcgcc attccgggac cggtgagcga ggcttacagt attgctttcg
     2641 ggcactgggc gtcgctggaa gggaaaggga cgccagaagg tatttacgcg ctggataccg
     2701 gctgctgctg gggcggggag ttaacctgtt tacgttggga agataaacag tattttgtgc
     2761 agccgtcaaa ccgccagatg gatatgggcg aaggcgaagc ggtcaacgcc tgataggttt
     2821 atgcctgatg gcgctacgct tatcaggcct acatccggct caagagtagg ccggataagg
     2881 catttcgccg ccatccggca ctacagcgtt aacgacgctc cagaatctcg aaacaatagc
     2941 tgtgagaatt ctgcgcgtcg gcatcgtgaa actcactgaa taccgattcc cagtcatccg
     3001 gttcataatc cggaaaatgg gtatcgcctt cgacttccgc atcaatatgc gtcagataaa
     3061 gcttctgcgc ctttggcagg aactgctcgt acacgcgccc gccgccaatg accataattt
     3121 ccggcgcatc gccgcaagcg gcaatcgcct catcgacaga cttcacccac tgcacgcgat
     3181 cgtcggtgcc cggctggctg ctgataataa tatttttacg tcccggtaag gggcgtccga
     3241 tggactccca agtgtgacgt cccatgacga caggtttatt taacgtgtta cgtttaaacc
     3301 atgcgagatc ggcaggcagg ttccacggca tggcgttttc cataccgatg acgcgatcca
     3361 ccgctaacgc cgcaatcaga ctgatcatta attatttcct gatacaaaaa aaattgccgc
     3421 cactatacgt aaagcgcaat ctttcgtcga ctgacgaaaa gaggatgagc acgaaaattt
     3481 ttcgttctgc tggcgacgcc actcatttga tgtggagcgc cagcattaca gtagttcaaa
     3541 aacagccaat tagcagtaaa gtttgcagaa catcacattt tttactttag attgacggtt
     3601 tgacctcggg ttcatcagcg gccttcccgg aatgtttgcc ctcagccgtt ccctgccagc
     3661 cgtggcgctg aatcaacgac agatgctccc ggtcctcggt aataatttcg ctcaacatcg
     3721 cgctggtacg tttataggcg gcggcgcgag ataacggatc gttttcccct ttcgccatct
     3781 cttccaccat ccgggtatta aaatgacaga acagatccgc gcgctcgcgg gcttcataac
     3841 gccccagccc cagcgcctcc aaagcctgtc gcccgctttt gagcgcgcct tcgaaggttt
     3901 cacgttcggg catcgccaca ccagcctggc gcaggcgaat gtaatgatcg acatcacggg
     3961 cgcgggcgat aatctgcaga tgcgggaaat gcgtcttcac cagttcactc agttgcaaat
     4021 tggtttgcgg atcgtcaatg gcgttaatca atacctccgc cttcgccgct ccggcagatt
     4081 ccagcaaatc catacgcgtc gcgtcgccat aaaaaacctt catgccgaat ttacgcagcg
     4141 tttcgatatg atcggggtcg tgatcgagca ccaccatctt caccccgctc gacagcagta
     4201 aacgcccggc tatctgccca aatcgcccaa acccggccac aatgacccgc ggctgctctt
     4261 cgtcgatttc atccgcctcg cgcgcttcac ccgttgcggt cttttccatg cgcgtcagca
     4321 gcaccagaaa aatcggcgtg gccgccatcg acagcgcgac cgccagcgtc agcgcttttg
     4381 cccattccgg ctcaagtaca tccgccattt gcgccgcgcc aaaaaccaca aacgcaaact
     4441 cacttccctg gcctaataag acggcaaacc agcgacgctg ttttgccggt acgcccaggg
     4501 tcctcgcgac cagccacagc atgacgattt tgattgccag aaaaccggcc aacaacagca
     4561 gaatgcgcag cggattctcc accagcgtgc cgaaatcaat cgacatgccg acgccaataa
     4621 agaacaaccc cagcagcaac cccttaaagg gttcaatatc gctttccagc gcatgacgat
     4681 attccgaact cgccagcaga acgcccgcca ggaacgcgcc catcgccatt gacagcccaa
     4741 cctcttccag caacaggccg aaaccaaaca ccagaaatag cgccacggcg ctgaacacct
     4801 cccgcaaacc agaacgcgcg acaaagcgca gcgccgggcg cgtaacgtag cgtcccagca
     4861 acaccaccag cgccaacgcg cctgcgactt tcaacgccga tagcgcaaac gcgccaagcg
     4921 tggtggatgc
//
LOCUS       DAGWFR010000240         4914 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.243, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000240 DAGWFR010000000
VERSION     DAGWFR010000240.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4914)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4914)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4914
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.243"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..274
                     /locus_tag="MOX77_004305"
     CDS             <1..274
                     /locus_tag="MOX77_004305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3359690.1"
                     /translation="SVAAEPLFGRTIENPRPFSPLDFQAPPLRLLHWQPSAQGGEMAL
                     KTSWDAVPSLFVRLAESEMSVSRFSLRREGAELLITLQLERLANEG"
     gene            264..665
                     /locus_tag="MOX77_004306"
     CDS             264..665
                     /locus_tag="MOX77_004306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2531 family protein"
                     /protein_id="HCA3359691.1"
                     /translation="MKVSRGVLLCFCLLTLTGMRDPFRPPEDRCRIAELSQWRYQGAV
                     RKGERWTGILKDSQQKWRRVEEGQTLENGWTIVRLTAEALTLTTGKNCAPPQWRWLRQ
                     GADNEAMDSHNTDSLDARRAGGKSGESDAGG"
     gene            580..1818
                     /gene="hofQ"
                     /locus_tag="MOX77_004307"
     CDS             580..1818
                     /gene="hofQ"
                     /locus_tag="MOX77_004307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA uptake porin HofQ"
                     /protein_id="HCA3359692.1"
                     /translation="MKRWIAIILIVLMPAAQAGKAAKVTLVVDDVPVVQVLQALAEQE
                     RQNLVVSPDVSGTLSLHLTDVPWKQALQTVVNSAGLVLRQEGNILHVHSQAWQKEHSA
                     RQDAERLRLQANLPLENRSISLQYADAGELAKAGEKLLSAKGTIMVDKRTNRLLLRDN
                     RAALAELEKWVSQMDLPVAQVELAAHIVTINEKSLRELGVKWTLADATQAGAVGDVTT
                     LSSDLSVAAATSRVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIK
                     QGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQA
                     DGEVLAIDKQEIETQVEVKSGETLALGGIFSRKNKSGSDSVPLLGDIPWLGQLFRHDG
                     KEDERRELVVFITPRLVATE"
     gene            2283..2804
                     /gene="aroK"
                     /locus_tag="MOX77_004308"
     CDS             2283..2804
                     /gene="aroK"
                     /locus_tag="MOX77_004308"
                     /EC_number="2.7.1.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004709337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase AroK"
                     /protein_id="HCA3359693.1"
                     /translation="MAEKRNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTG
                     ADVGWVFDVEGEDGFRNREEKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVY
                     LETTIEKQLARTQRDKKRPLLQVEAPPREVLEALANERNPLYEEIADVTIRTDDQSAK
                     VVANQIIHMLESN"
     gene            2861..3949
                     /gene="aroB"
                     /locus_tag="MOX77_004309"
     CDS             2861..3949
                     /gene="aroB"
                     /locus_tag="MOX77_004309"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HCA3359694.1"
                     /translation="MERITVTLGERSYPITIAAGLFNEPASFLPLKSGDQVMLVTNET
                     LAPLYLDKVRGVLERAGVNVDSVILPDGEQYKSLTVLDTVFTALLKKPHGRDTTLVAL
                     GGGVIGDLTGFAAASYQRGVRFIQVPTTLLSQVDSSVGGKTAVNHPLGKNMIGAFYQP
                     ASVVVDLDCLKTLPARELASGLAEVIKYGIILDADFFTWLEGNLDALLRLDGPAMAYC
                     IRRCCELKAEVVAADEREAGLRALLNLGHTFGHAIEAEMGYGNWLHGEAVAAGIVMAA
                     RASERLGQFSSADTQRIIALLERAGLPVNGPCEMSAQDYLPHMLRDKKVLAGELRLVL
                     PLTIGKSEVRGGVSHEVVLSAIADCQQA"
     gene            4047..>4914
                     /gene="damX"
                     /locus_tag="MOX77_004310"
     CDS             4047..>4914
                     /gene="damX"
                     /locus_tag="MOX77_004310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein DamX"
                     /protein_id="HCA3359695.1"
                     /translation="MDEFKPEDELKPDPSDRRTGRSRQSSERDNEPQINFDDVDLDAD
                     DRRPTRTRKARSEEPEVEEEYESDEDDTVDEERVERRPRKRKKAAHKPASRQYMMMGV
                     GVLVLLLLIIGIGSALKAPSTSSSEPSASGEKSIDLSGNAADQANATQPAPGATSAEQ
                     TAGNTSQDISLPPISSTPMQGQSPVVADGQQRVEVQGDLNNALTQNPEQMNNVAVNST
                     LPTEPATVAPVRNGSTTRQAAVSEPAERHTTRPERKQAVIELKKPQTTAKTTTAEPKK
                     PVAPVKRTEPAAP"
BASE COUNT         1160 a         1194 c         1492 g         1068 t
ORIGIN      
        1 gagcgtcgcg gctgaaccgc ttttcgggcg taccatcgaa aatccgcgtc ctttttcgcc
       61 gttagatttc caggcgcctc ccttgcgttt gctgcactgg cagccatcgg cgcagggggg
      121 agaaatggcg ctgaaaacgt cctgggatgc ggtgccgtcg ctgtttgtcc ggttggccga
      181 aagcgagatg agcgtaagtc ggttttcatt gcgtagggag ggggcggaat tattgataac
      241 gctgcaactg gagcgactgg cgaatgaagg ttagccgcgg tgtattgctc tgtttttgtt
      301 tgctgacgtt gacgggaatg cgcgatccct tccgcccgcc ggaagatcgc tgccggatag
      361 cggaactctc gcagtggcga tatcagggcg cggtgcgtaa aggcgagcga tggacaggca
      421 ttcttaaaga cagccagcaa aaatggcggc gagtggaaga agggcagacg ctggaaaacg
      481 gttggacgat tgtccgcctg acggcggaag ccttaacgtt aacgaccggt aaaaattgtg
      541 cgccgccgca gtggcggtgg ttacgtcagg gagcggacaa tgaagcgatg gatagccata
      601 atactgatag tcttgatgcc cgccgcgcag gcgggaaaag cggcgaaagt gacgctggtg
      661 gttgatgacg ttcctgtggt gcaggttttg caggctttag ccgaacagga gcggcagaat
      721 ctggtggtgt cgccggacgt cagcgggaca ttatcgctac atctgacgga tgtgccgtgg
      781 aaacaggcgc ttcagacggt ggtcaatagc gcggggctgg tgctgcgtca ggaggggaat
      841 attctccatg ttcattcaca ggcctggcag aaagaacaca gtgcgcggca ggatgccgag
      901 cggttaaggc ttcaggctaa tttaccgctg gaaaaccgca gcattagcct gcaatacgcc
      961 gatgccggcg aactggcgaa agcgggcgag aaactcctga gcgcgaaggg aaccatcatg
     1021 gtagataagc gcaccaaccg cctgctgttg cgcgataacc gcgcggccct ggcggagctg
     1081 gaaaaatggg tatcgcaaat ggatctgccg gtggcgcagg tggagctggc ggcgcatatc
     1141 gtcaccatta acgaaaagag tctacgggaa ctgggcgtaa agtggacgct ggctgacgcg
     1201 acgcaagcgg gcgcggtggg tgacgtgacg acgctttcca gtgatttatc cgtcgccgcc
     1261 gccacctcac gcgtcgggtt taacatcggg cgcattaacg gacgcctgct ggatttagag
     1321 ctgtcagcgc tggaacaaaa gcagcagttg gatattatcg ccagcccccg gctgctggct
     1381 tcgcatctac agccagccag tatcaagcaa ggcagcgaaa ttccttatca ggtttccagc
     1441 ggcgaaagcg gcgcgacctc cgtggaattt aaagaagcgg tactgggaat ggaggtgacg
     1501 cccaccgttt tgcaaaaagg gcgcatccgc ctgaagttac atatcagcca gaatgttccc
     1561 ggtcaggtac tacaacaggc tgacggcgaa gtgctggcga tagataaaca ggaaattgaa
     1621 acgcaggtag aggtaaaaag cggcgagacg ctggcgctgg gcggcatttt ttcgcgaaaa
     1681 aataaatcgg gtagcgatag cgtgccgctg ttgggggata ttccctggct tggtcagctc
     1741 ttccgccatg acggcaaaga ggacgagcga cgcgaattag tggtgtttat cacccccaga
     1801 ctggtggcga cagaataatt tatgcataaa aaagcgctgt ttttgcactg aacgcatctg
     1861 cgggatttga cgtgcggatg tatttagcat acaaggagta ccgatttgag agtcgtgctt
     1921 ttcgttgctt acgcattgat taatgcgctt tgccttgccg aaggtgtgca taagaccgat
     1981 gataaacggc tgaatgtccg ctgatgcaga cgtattggtt ctgcggattg cgcacaattg
     2041 tttgaaagta gagcaatttg taggccggat atgttgttct ggtcgccatt cggcaacgct
     2101 aactcgggtt ttgcaacaat caggcttggt gatttattca gttgccaaac ccgcttgagt
     2161 attgagataa ttttcagtct gactctcgca atatcttatg aggtttcagt tcatgtcctg
     2221 ctgcgctggg tgtctgtgaa gcgggtttac cattaacgaa tagtcttagt agtaccgaaa
     2281 aaatggcaga gaaacgcaat atctttctgg ttgggcctat gggtgccgga aaaagcacta
     2341 ttgggcgcca gttagctcaa caactcaata tggaatttta cgattctgat caagagattg
     2401 agaaacgaac cggagctgat gtgggctggg tcttcgatgt tgaaggtgaa gacggcttcc
     2461 gtaatcgtga agaaaaagtt atcaacgaat tgacggaaaa acagggtatt gtgctggcaa
     2521 ccggcggtgg ctctgtaaaa tcgcgtgaaa cgcgtaaccg tctctccgcg cgtggcgtcg
     2581 tggtctacct tgaaacgacc atcgaaaaac aactggcgcg cacgcagcgt gataaaaaac
     2641 gcccgctgtt gcaggttgaa gcaccgcctc gcgaagttct ggaagcgctg gctaacgaac
     2701 gcaatccgct gtacgaagag attgccgacg tcaccattcg caccgacgat caaagcgcta
     2761 aggttgtggc aaaccagatt attcatatgc tggaaagcaa ctaattcaag cagaatacgc
     2821 tgggtaagcg ggcacaagta actaaggtgg atgtcgcgtc atggagagga ttacagtcac
     2881 tctcggggaa cgtagttacc cgatcaccat cgcggctggt ttgtttaacg aaccagcttc
     2941 attcttgccg ctgaaatcag gcgatcaggt catgttagtg accaacgaaa ccctggcgcc
     3001 gctttatctg gacaaggttc gcggcgtact cgaacgggcg ggcgttaacg tagacagcgt
     3061 gattcttcct gacggcgagc agtataagag cctgacggtg ctggatacgg tgtttacggc
     3121 gttactgaaa aaaccgcatg gtcgtgatac cacgctggtc gcgcttggcg gcggcgtgat
     3181 tggcgatctt accggttttg cggcggccag ctaccagcga ggcgttcgtt tcatccaggt
     3241 gccaactacc ttactgtcgc aggttgattc ttccgtgggc gggaagaccg ccgtcaacca
     3301 tccccttggc aaaaacatga ttggcgcgtt ttaccaaccc gcttctgtgg ttgtcgatct
     3361 tgattgcctg aaaacgcttc ccgcacgcga actggcatcg ggactggcag aggtgatcaa
     3421 atacggcatt atactcgacg cagacttctt cacctggctt gagggtaatc tggatgcgct
     3481 attgcgtctg gacggcccgg cgatggcgta ctgtattcgt cgttgttgcg agctgaaagc
     3541 cgaagttgtt gccgccgacg agcgtgaagc gggcttacgt gctttactga atcttgggca
     3601 tacctttggc cacgccattg aagcggaaat gggatatggc aattggttac atggtgaagc
     3661 cgttgccgca ggtatagtga tggctgcgcg cgcatccgag cgtttggggc agttcagttc
     3721 tgctgatacg cagcgcatca tcgcgctact cgaacgggcc gggttgccag tcaatggccc
     3781 ttgcgagatg tccgcgcagg actatttgcc gcacatgctg cgagataaaa aagtgttagc
     3841 gggggagctg cgtttagtgc ttccgctgac catagggaaa agtgaagtgc gcggcggagt
     3901 gtcgcacgaa gtcgttctta gcgcgattgc tgactgtcag caggcgtaac aacaagaaag
     3961 gtcagactga tattgcgtag ctgtcagtct tttagcttca ggttatgtgc aatgtcgtaa
     4021 gcattaacct ttgagtgggg tgttaaatgg atgaattcaa accagaagac gagctgaaac
     4081 ccgatcccag cgatcgtcgt actggtcgtt ctcgtcaatc ttcagaacgc gataatgagc
     4141 cgcagatcaa ctttgatgac gttgatctgg atgccgacga tcgccgtccg acgcgtacgc
     4201 gtaaagcgcg tagtgaagaa cctgaagttg aagaagagta cgaatccgat gaagacgata
     4261 cggtggacga agagcgtgtt gaacgccgtc cacgtaagcg taaaaaagcg gcccataagc
     4321 cagcctctcg tcagtacatg atgatgggcg ttggcgtact ggtgctgctg ctgttgatta
     4381 tcggtatcgg ctccgcgctg aaagccccct caacgtcttc cagcgagccg tcggcctctg
     4441 gcgaaaagag tatcgatctt tccggtaacg ccgccgatca ggcgaatgcg acccagcctg
     4501 cgccgggcgc cacctccgca gaacaaaccg cgggcaatac gtcgcaggat atttcgttgc
     4561 cgccgatttc ttcaacgccg atgcagggac agtcgcctgt ggtcgctgac ggtcagcagc
     4621 gcgtggaagt gcagggcgat ctgaataatg cgctgacgca gaatccagag cagatgaaca
     4681 atgttgcggt gaactctacg ttgccgacag agcctgcaac cgtcgcgcca gttcgcaatg
     4741 gcagcacgac gcgtcaggcg gcggttagcg aacctgccga gcgtcatacc acgcgtccgg
     4801 aacgtaaaca ggccgtcatt gaacttaaga aaccgcagac cacggcgaaa accaccactg
     4861 cggaaccgaa gaaaccggtc gcgccagtga aacgcacgga accggcagcg ccag
//
LOCUS       DAGWFR010000241         4864 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.244, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000241 DAGWFR010000000
VERSION     DAGWFR010000241.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4864)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4864)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4864
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.244"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..613)
                     /gene="sseA"
                     /locus_tag="MOX77_004311"
     CDS             complement(<1..613)
                     /gene="sseA"
                     /locus_tag="MOX77_004311"
                     /EC_number="2.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-mercaptopyruvate sulfurtransferase"
                     /protein_id="HCA3359696.1"
                     /translation="MTTAFFVAADWLAEHIDDPEIQILDARMAPPGQEHRDMAGEYRA
                     GHIPGALFFDIEALSDRASPLPHMMPRPEAFAVAMRELGVRQDKHLVIYDEGNLFSAP
                     RAWWMLRTFGAEKVSILAGGLAGWQRDEWLLREGEEAHEGGEFEAKFTPQAVVRLTDV
                     LLASHEKTAQIVDARPAARFNAQADEPRPGLRRGHIPGALNVPW"
     gene            822..>4864
                     /locus_tag="MOX77_004312"
     CDS             822..>4864
                     /locus_tag="MOX77_004312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-2-macroglobulin family protein"
                     /protein_id="HCA3359697.1"
                     /translation="MKHLRVVACMIMLALAGCDNNDKTAPTTKSEAPAVAQPSPAQDP
                     SQLQKLAQQSQGKALTLLDASEAQLDGAATLVLTFSIPLDPEQDFSRVVHVVDKKSGS
                     VDGAWELAPNLKELRLRHLEPERVLVVTVDPAVKALNNATFGKSYEKTITTRDVQPSV
                     GFASRGSLLPGKIAEGLPVMALNVNHVDVNFFRVKPGSLASFVSQWEYRSSLSNWESD
                     NLLKMADLVYTGRFDLNPARNTREKLLLPLSDIKPLQQAGVYVAVMNQAGHYNYSNAA
                     TLFTLSDIGVSAHRYHSRLDIFTQSLENGAAQSGIEIVLLNDKGQTLAQATSDAQGHV
                     QLEADKAAALLLARKEGQTTLLDLTLPALDLSEFNVAGAPGYSKQFFMFGPRDLYRPG
                     ETVILNGLLRDSDGKTLPDQPVKLEVVKPDGQVMRTVVSQPENGLYRLNYPLDINAPT
                     GLWHVRANTGDNLLRSWDFHVEDFMPERMALNLTAQKTPLAPADEVKFSVVGYYLYGA
                     PANGNTLQGQLFLRPLRDAVAALPGFQFGNIAEENLSRSLDEVQLTLDKGGRGEVSAA
                     SQWQEAHSPLQVILQASLLESGGRPVTRRVEQAIWPADTLPGIRPQFAAKAVYDYRTD
                     TTVNQPIVDEDSNAAFDIVYANAQGEKKAVSGLQVRLIRERRDYYWNWSESEGWQSQF
                     DQKDLVEGEQTLDLNADETGKVSFPVEWGAYRLEVKAPNETVSSVRFWAGYSWQDNSD
                     GSGAARPDRVTLKLDKANYRPGDTMKLHIAAPVAGKGYAMVESSDGPLWWQAIDVPAQ
                     GLELTIPVDKTWNRHDLYLSTLVVRPGDKSRSATPKRAVGLLHLPLGDDNRRLDLALE
                     SPAKMRPNQPLTVRVKASVKHGEMPKQINVLVSAVDSGVLNITDYATPDPWQAFFGQK
                     RYGADIYDIYGQVIEGQGRLAALRFGGDGDDLTRGGKPPVNHANIIAQQAQPITLNEQ
                     GEGVVTLPIGDFNGELRVMAQAWTADDFGRGESKVVVAAPVIAELNMPRFLAGGDVSR
                     LVLDVTNLTDRPQTLNIALAASGLLELLSQQPQPVNLAPGVRTTLFVPVRALEGFGEG
                     EIQATISGLNLPGETLGAQHKQWQIGVRPAWPAQTVNSGIALAPGESWHVPEQHLANV
                     SPATLQGQLLLSGKPPLNLARYIRELKAYPYGCLEQTTSGLFPALYTNAAQLQSLGIT
                     GDSDEKRRAAVDIGISRILQMQRDNGGFALWDENGAEEPWLTAYAMDFLIRAGEQGYS
                     VPPEAINRGNERLLRYLQDPGTMLIRYSDNTQASTFAAQAYAALVLARQQKAPLGALR
                     EIWERRSQAASGLPLMQLGIALNTMGDA"
BASE COUNT         1078 a         1340 c         1465 g          981 t
ORIGIN      
        1 tccacgggac gtttagcgcg ccaggaatgt gtccgcgtct cagtcccgga cgcggttcat
       61 cagcctgagc gttaaaacgc gccgccggac gcgcgtcgac gatttgcgcg gttttttcat
      121 ggcttgccag caatacgtcg gtgagacgca ccacggcttg cggcgtgaat ttcgcctcaa
      181 actcgcctcc ttcatgcgct tcttcgcctt cgcgcaatag ccattcgtcg cgctgccagc
      241 ccgccagtcc gcccgccaga atggacactt tctcggcacc gaacgtgcgc agcatccacc
      301 atgctcgcgg agcggagaac agattgcctt catcgtatat gaccaggtgt ttatcctggc
      361 gaacacccag ttcacgcatg gccaccgcaa acgcttccgg gcgcggcatc atatgcggca
      421 gcggcgatgc gcgatcggaa agcgcttcaa tatcaaaaaa cagcgcgccg ggaatatgtc
      481 cggcgcgata ttcgcccgcc atatcacgat gttcctgtcc tggtggcgcc atacgggcgt
      541 caagaatctg tatttccgga tcatcaatat gttcggcaag ccagtcggcg gcgacaaaaa
      601 aggcggtggt catgggcatc tccattgtta cctgattatg gtcaaattgt cggacgtttc
      661 ccgaaaaggg acaagtagaa gaggctgttt tggctggcga aaccacattt ctgcgtaaaa
      721 ttttcgcgtc atcacagtaa tacggactta cacaataaaa tttctcgcgc ataatatctc
      781 atcaaccgtt gctgacaggc cgttaaggcc agggatgaaa gatgaaacat ttacgcgtgg
      841 tggcctgcat gatcatgctg gcgctggcgg gatgcgataa caacgataaa accgccccga
      901 cgactaaaag cgaagcgcca gccgtagcgc agccctcgcc cgcgcaagac ccgtcacagc
      961 tacaaaagct ggcgcagcaa agccagggca aagcgctcac gctattagac gcctccgaag
     1021 cgcagctcga cggcgcggcg acgctggtgc tgacgttttc aattccttta gatcctgaac
     1081 aggatttctc ccgtgtggtt cacgtggttg ataagaaaag cggcagcgtt gacggcgcat
     1141 gggagctggc gccaaattta aaagagctaa ggttacgtca tctggaacct gagcgcgtgc
     1201 tggtggtcac ggttgatccc gccgttaaag cgctgaataa cgccaccttc ggcaagtctt
     1261 atgaaaaaac gattaccacg cgtgatgtcc agcccagcgt cggctttgcc agccggggat
     1321 cgctgctacc ggggaaaata gcggaaggac tgccggtcat ggcgcttaac gtcaaccacg
     1381 ttgatgtgaa ctttttccgc gttaagcccg gatcgctggc gtcgtttgtc agccagtggg
     1441 agtaccgtag ttccctctct aactgggaat ccgacaatct gctgaaaatg gcggatctgg
     1501 tttataccgg tcgttttgat cttaatccgg cgcgtaatac gcgtgagaaa ctgctgctgc
     1561 cattaagcga tattaagccg ctgcaacagg cgggcgtata tgtggcggta atgaatcagg
     1621 ctggacacta caactatagt aatgccgcta cgttgtttac ccttagcgat atcggcgtgt
     1681 ccgcgcaccg ttaccatagt cggctggata tctttacgca aagcctggaa aacggcgcgg
     1741 cgcagtcggg aattgagatc gttcttctga atgataaagg gcagacgctg gcgcaggcga
     1801 cgagcgacgc gcagggacat gtgcaactgg aggctgataa agcggcggcg ctattactgg
     1861 cgcgtaaaga ggggcagacc acgctgctcg atctcacgct tccggctctg gatctgtcgg
     1921 agtttaatgt cgctggcgcg cccggctaca gcaagcagtt ctttatgttc ggcccacgcg
     1981 atctctaccg accgggcgaa acggttatcc tcaacggatt actgcgcgat agcgacggta
     2041 aaacgctgcc cgatcaaccc gttaagctgg aagtggtaaa accagacgga caagtgatgc
     2101 gtaccgtcgt cagccagccg gaaaacggac tataccgttt gaattatccg ctggatatca
     2161 acgcgccgac cggcttgtgg catgtccgcg ccaacaccgg cgataatttg ctgcggagtt
     2221 gggatttcca cgtggaagac tttatgccgg agcggatggc gctcaacctg acggcgcaaa
     2281 aaacaccgct ggcgcctgcg gatgaggtga aattctccgt tgtcggctat tacttgtatg
     2341 gcgcccctgc taacggcaat accctgcaag ggcaactttt cctgcgtccg ctgcgcgacg
     2401 ctgtcgcggc gttgcctggc ttccagttcg gcaatattgc cgaagagaat ctttcgcgca
     2461 gcctggacga agttcaactg acgttggata aaggcggacg tggtgaagtg agtgctgcca
     2521 gccagtggca agaagcgcat tcgccgttgc aggtaattct acaggccagc ctgctggagt
     2581 ctggcggtcg tccggtcact cgtcgcgtag agcaggcgat ttggcctgcc gatacgttac
     2641 cgggaattcg tccacagttc gccgccaaag cggtatacga ctaccgtacg gataccaccg
     2701 ttaatcaacc gattgtcgac gaagacagca acgccgcatt cgatattgtt tacgccaacg
     2761 cgcagggcga gaaaaaagcg gtgtccggtt tacaggtgcg gctcatccgc gagcgtcgcg
     2821 actattactg gaactggtcg gaaagcgaag gctggcagtc gcagtttgat caaaaggatc
     2881 tggtggaggg cgagcagacg ctggatctga acgcggatga aaccggaaaa gtcagcttcc
     2941 cggtggaatg gggcgcgtac cgtctggagg tcaaagcgcc gaatgagacg gtcagcagcg
     3001 ttcgtttctg ggccggctat agctggcagg ataacagcga cggtagcggc gcggcgcgtc
     3061 cggatcgcgt caccctcaaa ctggataaag cgaattatcg tccaggcgac accatgaaat
     3121 tgcatatcgc cgcgccggtc gccggtaaag gttatgccat ggtggagtcc agcgatggtc
     3181 cgctgtggtg gcaggcgatc gacgtgccgg cgcaggggct ggagctcacg attccggtgg
     3241 ataaaacctg gaatcgccac gatctctatc tcagtacgct ggtggtgcgt cccggcgata
     3301 aatctcgttc cgcgacgcca aaacgcgccg tggggttact acatctaccg ctgggggatg
     3361 acaaccgccg cctcgatctg gcgctggaaa gcccggctaa aatgcgcccg aatcagccgc
     3421 tcaccgtcag ggtgaaagcc agcgttaaac acggcgaaat gccaaaacag atcaacgtgc
     3481 tggtctccgc ggtcgatagc ggtgtattga atatcaccga ttacgcgacg ccggacccgt
     3541 ggcaggcgtt cttcggtcaa aaacgctacg gtgcggatat ctacgatatt tacggccagg
     3601 tcattgaagg gcaggggcgg ctggcggcgt tgcgttttgg cggcgatggc gacgacctta
     3661 cgcgcggcgg aaaaccgccg gtaaaccatg ccaatatcat cgcgcagcag gcgcagccga
     3721 tcacgctcaa tgagcagggc gaaggggtcg taacgctgcc gattggcgac tttaacggcg
     3781 aactgcgggt tatggcgcag gcatggacag cggacgattt tggtcgcggc gaaagcaaag
     3841 tcgttgtcgc cgcgccagtg attgccgagc tgaatatgcc gcgttttctg gcgggagggg
     3901 atgtttcgcg actggtgctg gacgtcacca atctgaccga ccgcccgcag acgctgaata
     3961 ttgcgctcgc cgccagtggg ttactggaac tgcttagtca acagccgcaa ccggtcaacc
     4021 tggcgccggg cgtgcgcacc accttattcg ttccggtacg cgcgctggaa ggttttggcg
     4081 aaggcgaaat ccaggcgacc attagcggtc tgaatctgcc gggagaaacc ctcggcgcgc
     4141 agcataagca gtggcaaatc ggcgtgcgtc cggcctggcc tgcccaaacg gtaaatagcg
     4201 gcattgcgct ggcgccggga gagagctggc atgtaccaga gcagcatctg gcaaacgtct
     4261 cgccagccac gttacaggga caactgctgt taagcggaaa accgccgctc aatctggcgc
     4321 gctacattcg cgagctgaaa gcatatccgt acgggtgcct ggaacaaacc accagcgggt
     4381 tattcccggc gctgtatacc aatgccgctc aattgcagtc gctcggtatt accggcgata
     4441 gcgatgaaaa acggcgcgcc gcggtggata tcggcatctc ccgcatacta cagatgcagc
     4501 gtgataacgg cggttttgcg ctatgggatg aaaatggggc ggaagagccc tggctaacgg
     4561 cctacgcgat ggatttcctc attcgcgcgg gcgagcaggg atatagcgtc ccgccggagg
     4621 ccattaaccg gggcaatgag cgactgctgc gctatctgca ggatcccggt acgatgctga
     4681 ttcgttatag cgataatacc caggccagta cttttgccgc tcaggcttac gccgcgctgg
     4741 tactggcgcg tcagcagaaa gcgccgctcg gcgcgctgcg cgaaatctgg gagcgccgta
     4801 gtcaggcggc ttcaggactg ccgctgatgc aattgggcat cgcgttaaac acgatgggtg
     4861 atgc
//
LOCUS       DAGWFR010000242         4829 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.245, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000242 DAGWFR010000000
VERSION     DAGWFR010000242.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4829)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4829)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4829
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.245"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..266)
                     /locus_tag="MOX77_004313"
     CDS             complement(<1..266)
                     /locus_tag="MOX77_004313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3359698.1"
                     /translation="MTAVSQKTTTPSADFSLFRIAFAVFLTYMTVGLPLPVIPLFVHH
                     ELGYSNTMVGIAVGIQFFATVLTRGYAGRLADQYGAKRSALQGML"
     gene            complement(446..820)
                     /locus_tag="MOX77_004314"
     CDS             complement(446..820)
                     /locus_tag="MOX77_004314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3359699.1"
                     /translation="MAKEWFTVKECLGLPGFPGSEPAVRERLYKYSEGKAGVRRKRVK
                     SKAEEFHISVFPLYVHRYLDDSGEEPTPEPISLQEAEPEDIWEMMFRLLTPEQRKQVT
                     GRFKVRGMKAVFLFLFDDTPPR"
     gene            992..1240
                     /locus_tag="MOX77_004315"
     CDS             992..1240
                     /locus_tag="MOX77_004315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HCA3359700.1"
                     /translation="MEPKSQDWHRADIKSALEKRGITLRDLSRQAGLSPDSLRNVFTR
                     SWPRAERIIADALGITPQEIWPSRYGDMQIKNDADIAE"
     gene            1409..1777
                     /locus_tag="MOX77_004316"
     CDS             1409..1777
                     /locus_tag="MOX77_004316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HCA3359701.1"
                     /translation="MSWDKRVAVNYAKTHAGSHSQGRCAEFTRKAIQAGGITLGHTYH
                     AKDYGPMLRSAGFTAIGTYEMPREGDVIIIQPYAGGNPSGHMAIYDGAEWYSDFKQRD
                     MWAGPGYRAARPSYTIYRKN"
     gene            1777..2295
                     /locus_tag="MOX77_004317"
     CDS             1777..2295
                     /locus_tag="MOX77_004317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjP/YqhG family protein"
                     /protein_id="HCA3359702.1"
                     /translation="MKTFSLVALILLLCSCSAPHHDSTQAVKQFYTSWMTTFMNDVNT
                     PDDTTALMQRYVAKEVIHRLALIQSLYEQEIVGADYFMYAQDYAPEWIPQLRVGKAHP
                     FLGGEKVDVLLATESTPIHLEVYTRWEEGRWKIYRVRDADKDYEQPIYDAGAITQAEA
                     WSAKVAPEYEKH"
     gene            complement(2362..3018)
                     /locus_tag="MOX77_004318"
     CDS             complement(2362..3018)
                     /locus_tag="MOX77_004318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HCA3359703.1"
                     /translation="MPTNTLDKIRHSLSCVAVLFGLFGIFVFASFSPSYAWLYLGGLA
                     APFIYSIVFVYAIAAWSIYSKYYPFLSLGRLSFVECFVPALALVCLTVLYNVFSGPEP
                     WMAELSRQFFLHKFLNTLVMCFLAPVAEEIIFRGFLLNSSIGWGRYSRVSGIIITSLA
                     FAFMHTQYLFAVTFVYLFVFSSILCVVRMRSRGLMIPITLHILNNAWVIFGLLFSATE
                     "
     gene            complement(3116..4330)
                     /gene="fabB"
                     /locus_tag="MOX77_004319"
     CDS             complement(3116..4330)
                     /gene="fabB"
                     /locus_tag="MOX77_004319"
                     /EC_number="2.3.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase I"
                     /protein_id="HCA3359704.1"
                     /translation="MKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDAGM
                     RSQVWGNVKLDTTGLIDRKVVRFMSDASIYAYLSMEQAVADAGLAPEVYQNNPRVGLI
                     AGSGGGSPKFQVFGADAMRSPRGLKAVGPYVVTKAMASGVSACLATPFKIYGVNYSIS
                     SACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKA
                     SRTYDAHRDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPSGEG
                     AVRCMQMAMHGVDTPIDYLNSHGTSTPVGDVKELGAIREVFGDNSPAISATKAMTGHS
                     LGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIVTETTERELTTVMSNSFGF
                     GGTNATLVMRKL"
     gene            4490..>4829
                     /gene="mnmC"
                     /locus_tag="MOX77_004320"
                     /gene_synonym="trmC"
                     /gene_synonym="yfcK"
     CDS             4490..>4829
                     /gene="mnmC"
                     /locus_tag="MOX77_004320"
                     /gene_synonym="trmC"
                     /gene_synonym="yfcK"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311235.2"
                     /note="5-methylaminomethyl-2-thiouridine-forming enzyme
                     methyltransferase/FAD-dependent demodification enzyme;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA
                     (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase
                     MnmD/FAD-dependent
                     5-carboxymethylaminomethyl-2-thiouridine(34)
                     oxidoreductase MnmC"
                     /protein_id="HCA3359705.1"
                     /translation="MKQYAIQPATLEFNAEGTPVSRDFDDVYFSNDNGLEETRYVFLG
                     GNRLAERFPVHSHPLFIVAESGFGTGLNFLTLWQAFDSFRSAHPQATLQRLHFISFEK
                     FPLTRDDLALA"
BASE COUNT         1317 a         1238 c         1126 g         1148 t
ORIGIN      
        1 agcatcccct gtaacgccga tcgtttagcg ccatattgat ccgccagccg tccggcatag
       61 ccgcgcgtca gtaccgtcgc aaaaaactga atgcccacgg cgatcccaac catcgtattg
      121 ctatagccca gttcgtgatg gacaaaaagc ggaatgaccg gtaacggcag gccgaccgtc
      181 atataggtca ggaaaaccgc aaaggcgatg cggaacagcg aaaaatccgc agacggggtc
      241 gttgtttttt ggctaactgc tgtcatgcat tactccagaa tgcagagtaa ggcggggaaa
      301 ggccacgccc ccctctacct gaacgtcagg attaaggtgc gttggataac gttaaacgct
      361 tacgcattat cggaaggata atgtagaaag tgaagtctgc ctgtgagacg cgaaacttgt
      421 caaccttgaa attgcagcca gggtatcaac gcggcggcgt gtcatcaaac agaaagagaa
      481 agaccgcttt catccctctc accttaaacc gtccagtcac ctgcttgcgc tgttctggcg
      541 tcagtaacct gaacatcatc tcccagatat cttcaggctc cgcttcctgt aaggaaatgg
      601 gttctggcgt cggttcctct ccgctgtcgt ccagataacg atgaacatag agagggaaaa
      661 cagatatatg aaactcctcg gcctttgatt taacacgctt acgcctgacc cccgctttcc
      721 cttcactgta cttatataaa cgttcgcgaa ccgcaggctc gcttcccgga aaccccggta
      781 agccaagaca ttccttaacc gtgaaccatt cctttgccat cggtttcttt cctttcccct
      841 gatgaaataa aaatatttct tctttttcgc gaaattttgc tttctttctg gcactattct
      901 tagcgtgaaa aagaaagtaa cttccttttc catgcgctaa ttttatctta aaaatatcgg
      961 cgccgataac acatcttctt aggattacag aatggaacca aaaagccaag actggcatcg
     1021 tgcagatatt aaaagtgcac tggaaaaaag aggtattacg ctcagagatc tttctcgtca
     1081 ggccggttta tcacctgatt cactgcgcaa tgtctttacc cgttcctggc cgagagccga
     1141 acggattatt gcggacgcgc tgggcatcac gccgcaggag atctggccgt cgcgctatgg
     1201 cgatatgcaa ataaaaaatg atgccgatat cgcagaataa tagttaatgc tgaataaatt
     1261 ggctttaact tatcaatctc aacaattaat aaatatttaa acttattata ttgaaaatag
     1321 taatagcacg atctgtcatg cttcccgaat caaatactgt taaagcatta cgtaattgct
     1381 attacgtatt ttattaacag gaatcattat gagttgggat aaaagagtgg cggttaatta
     1441 tgccaaaacg catgcaggtt ctcattctca aggccggtgt gcggaattta cccgaaaggc
     1501 aattcaggcg ggcggtatca cgctggggca tacatatcat gcgaaagatt atggcccaat
     1561 gttaagaagc gccggattca ccgctattgg tacctatgaa atgccgcgcg agggtgacgt
     1621 catcattatt caaccttacg ctggcggaaa cccgagcggt cacatggcga tatacgatgg
     1681 cgcagagtgg tattcagatt ttaaacaacg cgatatgtgg gccggcccgg gctaccgggc
     1741 agccaggccc tcatatacca tctacaggaa gaattaatga aaacgttctc ccttgtcgcg
     1801 cttatcctgt tgctttgtag ttgctctgcg cctcatcacg acagtacgca ggccgtgaag
     1861 cagttctata cctcatggat gacgacgttc atgaacgatg tgaatacccc tgacgacacc
     1921 accgccttaa tgcaacgtta cgttgctaaa gaggttattc atcgcctggc gctaatacag
     1981 tccctttatg aacaggagat tgtaggggca gattatttta tgtatgcgca ggactatgcg
     2041 ccagagtgga ttccacagtt acgggttggg aaggcacacc ctttcctcgg cggagaaaaa
     2101 gtggatgttc tgttggctac agagtcaacg cccatccacc tggaagttta tacccgttgg
     2161 gaagagggac gctggaaaat ttaccgcgtt cgggatgctg ataaggatta tgaacagccg
     2221 atttatgacg caggcgccat cacccaggct gaggcctggt cagcaaaagt cgcgccggaa
     2281 tatgagaagc attaaaaaag ggaaccgcca tcgttctctt gttcgtaccg gagaggttaa
     2341 agagcctatt tcatcaggct cttattccgt cgctgaaaac agcaagccga aaataaccca
     2401 ggcattattt aaaatatgaa gtgttatcgg tatcattagt ccacggcttc tcattcgaac
     2461 aacgcataat atcgatgaaa aaacaaacag ataaacaaaa gtcaccgcaa agagatattg
     2521 tgtatgcata aatgcaaaag cgagtgaagt aataataata ccggaaactc ttgagtatcg
     2581 accccaaccg atactgctgt ttaataaaaa ccctctgaat ataatttcct ccgccacagg
     2641 agccagaaag cacatcacca gcgtgttaag aaatttatga agaaaaaatt gccttgataa
     2701 ctcggccatc cagggttccg ggccactaaa aacattgtag agaacggtaa ggcacaccag
     2761 ggccagcgcc ggaacaaaac attccacaaa tgataagcgg cccaatgata aaaacggata
     2821 atactttgaa taaatactcc aggcggcaat cgcgtagaca aaaacaatac tatatataaa
     2881 aggcgcagcc agacctccca aataaagcca ggcataggaa ggcgaaaatg aggcaaaaac
     2941 aaaaatgccg aacaaaccaa ataaaacagc cacacaactc aaactatgcc taattttatc
     3001 taatgtatta gttggcattt atataatatc catataattt gttgttccct gaatgaaaaa
     3061 acaggtcgca ttagcgacct gtttcattgt tgatactaca acgtaatagt caggcttaca
     3121 acttacgcat caccagcgtg gcgttggtgc cgccaaaacc gaagctgtta gacattacgg
     3181 tagtcagttc acgctcggtc gtttcggtca cgatgttcag gcccgcagcc tgctcatcca
     3241 gctcttcgat gttgatactc ggcgcgataa aaccgtgctc cagcattagc agagagtaga
     3301 tggcttcctg cacgccagcc gcgcccagcg agtggccggt catcgctttg gttgcagaaa
     3361 ttgccgggct gttatcgcca aacacttcac ggattgcacc gagttctttc acgtcgccta
     3421 ccggcgtgga cgtaccgtga gagttcaggt agtcgatcgg cgtgtctacg ccgtgcatcg
     3481 ccatctgcat gcaacgtact gcgccttcgc cagacggagc aaccatgtct gcgccatcgg
     3541 atgttgcgcc atagccgacg atttccgcat agatatgcgc gccgcgcgcc agagcgtgct
     3601 ccagctcttc gacaacaacc ataccgccac cgcccgcgat gacaaaccca tcacggtgcg
     3661 catcataggt acgggacgct ttttcaggcg tatcgttata tttggtggac agtgccccca
     3721 tcgcatcgaa ctcacaggcc atttcccagc acagctcttc gccgccgcca gcaaaaacga
     3781 tgtcctgttt gcccagttgg atctgttcaa ccgcattgcc gatacagtgt gcggaggtcg
     3841 cgcaagcgga gctaatggag tagttcacgc cataaatttt aaacggcgta gcgaggcagg
     3901 cggaaacgcc ggatgccatt gctttcgtca ccacatacgg gcccacagct ttcagaccac
     3961 gcgggctacg catggcgtct gcgccaaaga cctggaattt cggggagccg ccgccggaac
     4021 ctgcaatcag gccgacacgc gggttattct gatagacttc cggcgccaga ccggcgtcgg
     4081 ccactgcctg ctccatagac agataagcat agatggaggc gtcgctcata aagcgcacga
     4141 ctttgcggtc aatgaggcca gtggtatcca gttttacgtt gccccatacc tggctacgca
     4201 tgccggcgtc cttcagctcc tgagagaaag tgatccctga acgtccttca cgcagagatg
     4261 ccaggacttc ctgctggtta ttaccgatgc tggaaacgat gcccaggcca gtaatcactg
     4321 cacgtttcat tcaatacctc tgtaattcgc actattttta agtttcgatt ggcacaatag
     4381 cgtacacttg tacgccgaac aagtccgatc agccatttag tacggaaatt tgcgccatca
     4441 ggcacacatc gttaagatcg cgataccgcc cgtcagacga gtaacttacg tgaaacaata
     4501 cgccatacaa cccgccacac tcgaatttaa cgctgagggt acacctgttt cccgagattt
     4561 tgatgatgtc tatttttcta atgacaatgg actcgaagag acacgctacg tttttcttgg
     4621 cggcaatcgt cttgcggagc gatttcccgt acattcacat ccattattta tagtcgcgga
     4681 aagcggtttt ggcaccggac tcaacttcct gacgctgtgg caggcgtttg acagctttcg
     4741 ttctgcgcac ccacaggcga cgctgcaaag gttacatttc atcagctttg agaaattccc
     4801 gttaacgcgc gacgatctgg cgctggcgc
//
LOCUS       DAGWFR010000243         4741 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.246, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000243 DAGWFR010000000
VERSION     DAGWFR010000243.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4741)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4741)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4741
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.246"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..405
                     /locus_tag="MOX77_004321"
     CDS             <1..405
                     /locus_tag="MOX77_004321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001559634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp70 family protein"
                     /protein_id="HCA3359706.1"
                     /translation="VTAMEKSTGVEASIQVKPSYGLTDGEIASMIKDSMSFAEQDVKA
                     RMLAEQKVEAARVLESLTGALTADAALLSAAERQCIDDAAAHLSAVAQGDDVDAIEQA
                     IKNVDKQTQEFAARRMDQSVRRALKGHSVDEV"
     gene            407..742
                     /gene="fdx"
                     /locus_tag="MOX77_004322"
     CDS             407..742
                     /gene="fdx"
                     /locus_tag="MOX77_004322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015683702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISC system 2Fe-2S type ferredoxin"
                     /protein_id="HCA3359707.1"
                     /translation="MPKIVILPHQDLCPDGAVLEAETGETILDVALRNGIEIEHACEK
                     SCACTTCHCIVREGFDSLPESSEEEDDMLDKAWGLEPESRLSCQARVTDDDLVIEIPR
                     YTINHAREH"
     gene            754..954
                     /gene="iscX"
                     /locus_tag="MOX77_004323"
     CDS             754..954
                     /gene="iscX"
                     /locus_tag="MOX77_004323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004104502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein IscX"
                     /protein_id="HCA3359708.1"
                     /translation="MGLKWTDSREIGEALYDAYPDVDPKTVRFTDLHQWICELDDFDD
                     DPNASNEKILEAILLVWLDEAE"
     gene            1008..2291
                     /gene="pepB"
                     /locus_tag="MOX77_004324"
     CDS             1008..2291
                     /gene="pepB"
                     /locus_tag="MOX77_004324"
                     /EC_number="3.4.11.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase PepB"
                     /protein_id="HCA3359709.1"
                     /translation="MTEAMKITLSTQPADARWGDKATYSINNDGITLHLNGKDDLGLI
                     QRAARKIDGLGIKQVALTGEGWDTERCWAFWAGYKGPKGVRTVMWPDLDDAQRQELDN
                     RLTIIDWVRDTINAPAEELGPEQLAQRAVDLLCSVACDSVTYRITKGEDLREQNYMGL
                     HTVGRGSERPPVLLALDYNPTGDKDAPVYACLVGKGITFDSGGYSIKQSAFMDSMKSD
                     MGGAATVTGALAFAITRGLNKRVKLFLCCADNLISGNAFKLGDIIRYRNGKNVEVMNT
                     DAEGRLVLADGLIDASAQHPRLIIDMATLTGAAKTALGNDYHALFSFDDTLAGRLLTS
                     AAQENEPFWRLPLAEFHRNQLPSNFAELNNTGSATYPAGASTAAGFLSHFVENYREGW
                     LHIDCSATYRKAPVEQWAAGATGLGVRTIANLLTA"
     gene            2401..3177
                     /gene="sseB"
                     /locus_tag="MOX77_004325"
     CDS             2401..3177
                     /gene="sseB"
                     /locus_tag="MOX77_004325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311415.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enhanced serine sensitivity protein SseB"
                     /protein_id="HCA3359710.1"
                     /translation="MSETKNELEILLEKAATEPAHRSAFFRTLLESTVWVPGSAAEGE
                     AIVEDSALDLQHWEKEDGTTVIPFFTSLEALQQAVEDEQAFVVMPARTLFEMTLGETL
                     FLNAKLPTGKEFMPREISLLLAEEGSPLSTQEVLEGGESLILSEVAEPPSQMIDSLTT
                     LFKTIKPVKRAFLCAIKEHADAQPNLLIGIEADGEIEEIIHAAGNVATDTLPGDEPID
                     ICQVRKGAQGISHFITEHIAPFYERRWGGFLRDFKQNRII"
     gene            complement(3746..4414)
                     /locus_tag="MOX77_004326"
     CDS             complement(3746..4414)
                     /locus_tag="MOX77_004326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5066 family protein"
                     /protein_id="HCA3359711.1"
                     /translation="MDISLTNLMELVKKVNRNKVPNPMPAEEISCLRVRKYRDPQNTE
                     TTELPESLKALLAYDRDLLSNYNMPVIETLQRFIDNEGVIHSYSPDEEAYYGAGMDSS
                     GIDIEDLMPVWSNDPRLPALIRIDHVGDQAIFIYITERDANGEYPIARMERNEFWLAE
                     SSLVEYLYNIISGAKDIGFTEEDLHLPQWKAQQKMNEQRDAALLDLEDYHEAFWAKLD
                     ALVD"
BASE COUNT         1190 a         1188 c         1296 g         1067 t
ORIGIN      
        1 gtcaccgcaa tggaaaaatc caccggcgtc gaggcctcca ttcaggtcaa accttcctat
       61 ggcctgaccg atggcgaaat cgcctcgatg atcaaggatt ccatgagttt tgccgagcag
      121 gacgtgaaag cgcgtatgct ggcggagcaa aaagtcgaag ccgcgcgcgt gctggaaagt
      181 ttgaccggcg cgctaactgc cgacgccgcg ctgttaagcg ccgcagaacg tcaatgcatt
      241 gatgatgccg ccgcacattt aagcgcggtc gcacaaggcg atgatgttga cgcaatagaa
      301 caagccatta aaaacgtaga taaacaaacc caggaatttg ccgctcgccg catggaccag
      361 tcggttcgtc gcgcgttgaa aggccattcc gtagacgagg tttaacatgc cgaagattgt
      421 tattctgcct catcaggatc tttgtccgga tggcgcagtt ctggaagctg agaccggtga
      481 aaccattctt gacgttgcgc tgcgcaacgg catcgagatt gaacacgcct gtgagaaatc
      541 gtgcgcctgc accacctgtc actgtattgt acgtgaaggc ttcgactcct tgccggaaag
      601 ttcggaagaa gaagacgata tgctggataa agcgtggggg ctggagccgg aaagtcgact
      661 gagctgccag gcccgcgtta ccgacgacga tctggttatc gaaattccac gttacacaat
      721 caaccatgcg cgtgagcatt aacagagggt agtatgggac tcaagtggac cgatagccgc
      781 gagatcggcg aagcgttata cgacgcatat cctgatgtcg atcctaaaac cgttcgtttc
      841 accgatctgc atcagtggat ctgcgaactg gacgattttg acgacgaccc taacgcatcc
      901 aatgaaaaaa ttctggaggc gattctgcta gtctggttgg atgaagcaga gtaagtcaaa
      961 taacgggctg ccctacgacg gcccgtttgc taataaggaa aataacaatg acagaagcca
     1021 tgaaaattac gctttccacg cagcctgccg atgcgcgctg gggcgataaa gccacttaca
     1081 gtattaataa cgacggtatt accttgcatc ttaacggtaa agacgatctg gggttgatcc
     1141 agcgtgcggc gcgtaaaatc gacggcctgg gaataaaaca ggtcgcgctg acaggcgaag
     1201 gatgggatac cgagcgttgt tgggcattct gggcgggtta caaaggacca aaaggcgtcc
     1261 gtaccgtaat gtggccggat ttagacgatg cccaacgtca ggagctggat aaccgcctga
     1321 ccattattga ctgggtgcgc gacaccatta atgctccggc ggaagagctt gggccggagc
     1381 aactggcgca gcgcgcggtg gatctgctgt gcagcgtcgc gtgcgatagc gtcacttacc
     1441 gtatcaccaa aggcgaagat ctgcgcgagc agaactatat ggggttgcat accgtaggcc
     1501 gtggttctga gcgtccgccg gtactgctgg cgctggatta caacccgacg ggagacaaag
     1561 atgcgccggt ttatgcctgc ctggtcggta aaggtatcac ctttgactcc ggcggttaca
     1621 gtatcaaaca aagcgctttt atggactcaa tgaaatccga tatgggcggc gcggcgacag
     1681 taacgggcgc gctggcgttc gccattaccc gtgggctgaa taaacgcgta aaactgttcc
     1741 tgtgctgcgc tgataatctg atcagcggca acgcgtttaa actgggcgat attattcgct
     1801 accgtaatgg caagaatgtc gaagtcatga ataccgatgc ggaagggcga ctggtactgg
     1861 cggatggcct gattgacgcc agcgcgcaac acccgcggct aatcattgat atggcgacgt
     1921 taaccggcgc ggcgaaaacg gcgctgggta acgactacca tgcgctattc agttttgacg
     1981 atacgctggc ggggcgcttg ctgaccagcg cggcgcaaga gaatgagccg ttctggcgtc
     2041 tgccgctggc ggagttccac cgtaaccaac tgccgtctaa ctttgcggaa ctgaacaaca
     2101 ccggcagcgc gacgtatccc gccggggcaa gcaccgccgc gggttttctg tcgcactttg
     2161 ttgaaaatta ccgcgaaggc tggctgcaca ttgactgttc cgccacttat cgcaaagcgc
     2221 cggttgagca gtgggctgcc ggggcaaccg gtctgggtgt gcgcaccatc gcgaatctgc
     2281 tgaccgcctg aacggtgttt ttgtaggccg ggtaagcgaa gcgccacccg gcattttgcc
     2341 tgatggcgac gccgtgcgtc ttatcaggcc tacaacccat atacataatt tgtgattcct
     2401 atgtccgaaa ctaaaaatga attagaaatt ttgctggaga aagcggcgac tgagcccgcg
     2461 catcgttcgg catttttccg taccttactg gagtccaccg tctgggtgcc gggcagcgct
     2521 gccgaaggcg aggcgattgt ggaagacagc gctctggatt tgcagcactg ggaaaaagaa
     2581 gacggcacga ccgtcattcc cttctttact tctctggagg cgctgcagca ggccgtggaa
     2641 gacgaacagg cgtttgtggt gatgccggcg cgcacgctgt ttgaaatgac gcttggcgaa
     2701 acgttattcc tcaacgctaa attgccgacc ggcaaagagt ttatgccgcg tgaaatcagc
     2761 ctgcttctcg ctgaggaagg cagtccgtta agtacgcagg aagtgctgga aggcggcgag
     2821 tcgcttattt tatccgaagt ggccgagccg ccgtcgcaga tgattgattc cctcactacg
     2881 ctgtttaaaa ccatcaaacc ggtgaaacgc gcatttctct gcgcgattaa agaacatgcg
     2941 gacgcccaac ctaatctgct gattggcatt gaggctgacg gcgaaattga agagatcatt
     3001 cacgcagcgg gcaatgtggc gaccgacacg ttaccgggtg acgaaccgat cgatatttgt
     3061 caggtgagga agggcgcgca gggtatcagc cactttatca ccgagcatat cgcgccgttc
     3121 tacgagcgtc gttggggtgg gttcctgcgc gattttaaac agaaccgcat catctgaaga
     3181 aaagaaagcc gcccaacagg gcggcctcct ggcttacctg ctctggacgt tgagcgttac
     3241 gggaacagaa ttacctgggt agcttctgtc tgcgtgaaga cacaacgtgc cagaaacaag
     3301 aagcacgaca caaaagcatc gtaccttcat gttgcggtcc ttgcgaagac cgcatcacgg
     3361 cagcaccgct ggcgataatg ccgtgatagc aggcactgtg gtgtgcctgc gcttacggcc
     3421 atggaacatc ctctcctgaa gccagtgccc gtttgcgaga cggcgaaggg ggccgggaaa
     3481 gataatacct caaatgctga atagtttcgt cgtgaattaa cttgactttg ctctccttaa
     3541 aagggagtat ttacctactg tggtgtgcct gcgttgctat ggcaacaaag cctgctggaa
     3601 aggccgcgaa ccggaccagc acaaaaaaac cgctcaactg agcggttttt ttgtggcctg
     3661 cttaaacagt atttatgtag attcgtttta aatcagcctg aacggtaggc cggataagcg
     3721 tgagcgccac ccgacagcat gtcgattaat cgacgagcgc gtccagtttt gcccaaaacg
     3781 cctcatgata atcctccagg tcaagtaaag cggcatcgcg ttgttcattc attttttgct
     3841 gtgccttcca ttgcggaaga tgtaaatcct cttcggtaaa gccaatgtct ttagcgcccg
     3901 aaataatatt atagagatat tccaccagag aagactccgc cagccaaaat tcattacgtt
     3961 ccatgcgggc aatagggtat tcgccgttgg catcccgttc tgtgatatag ataaaaatgg
     4021 cctgatcgcc gacatgatca atacgaatta atgccggaag acggggatcg ttactccaga
     4081 caggcatcag atcttcaata tcaatacctg agctatccat gccagcgccg taatacgcct
     4141 cttcatcagg agagtaagaa tgtattactc cctcgttatc aataaatctt tgtaatgttt
     4201 caatcacagg catattataa ttgctaagta gatcgcggtc gtaggccagt agcgccttca
     4261 ggctttcagg taactcagtg gtttccgtat tttgcggatc gcgatactta cgcactcgca
     4321 gacaacttat ttcctcggca ggcataggat taggcacctt attgcggtta acctttttaa
     4381 ctagctccat taaattagtg agtgaaatat ccattttcca tccttaaaaa attatattta
     4441 caggagttat ttcccggtga aacccaaaac agcggtgatg atactcctta tacccgacgt
     4501 aaagtattta ccgataaaaa ataggatttt attaagagaa aataatgccc gtttgcagga
     4561 cagtggaaaa gagcggaata aaaacaatgt ctgtagatcg ttttacatca gcctgaacgg
     4621 taggccggat aagcgtgagc accatccggc atggcggata ttaagcgggt tcaaccggta
     4681 aatcggtacg cgcgccccat tcgctccacg cgccgtcgta aagcgtgacg tcaggcacat
     4741 c
//
LOCUS       DAGWFR010000244         4730 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.247, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000244 DAGWFR010000000
VERSION     DAGWFR010000244.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4730)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4730)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4730
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.247"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..274
                     /locus_tag="MOX77_004327"
     CDS             <1..274
                     /locus_tag="MOX77_004327"
                     /EC_number="3.2.2.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461069.1"
                     /note="inducible, catalyzes the hydrolysis of alkylated
                     DNA, releasing 3-methyladenine, 3-methylguanine,
                     7-methylguanine and 7-methyladenine; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase 2"
                     /protein_id="HCA3359712.1"
                     /translation="PDIEQSVKNLQTFPGIGRWTANYFALRGWQAKDIFLPDDYLIKQ
                     RFAGMTAAQIRRYAERWKPWRSYALLHIWYTHGWQPSMDSEIAGIQ"
     gene            complement(242..3232)
                     /locus_tag="MOX77_004328"
     CDS             complement(242..3232)
                     /locus_tag="MOX77_004328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MASE1 domain-containing protein"
                     /protein_id="HCA3359713.1"
                     /translation="MSKPSQHVFVTVPHPLLRLVSLGLVAFVFTLFSLVLSRVGTQLA
                     PLWFPTSIMMVAFYRHAGRLWPGIAVACSLGSIGASLTLFPAASLNFSWTAINIIEAA
                     TGAILLRKLLPSYNPLQNLNDWFRLAIGSAVIPPLLGGLLFWLIAPEAVASKAFLIWV
                     LSEAIGALTLVPLGLLFKPHYLLRHRDPHLLLETLLTLVITLALSWLAMRYIPWPFTC
                     VIVLLMWSAVRLPRMEAFLIFLATVIVVSLMLANDPTLLATPKTDVMVNMPWLPFLMI
                     LLPANMMTMVMYAFRTERKHITESESRFRNAMEYSAIGMALVGTEGQWLQVNKSLSHF
                     LGYSQDELRTMTFQQLTWPEDLNNDLEQLNMLVRGDINSYSMEKRYYTRNGDVVWALL
                     AVSLVRHKDNQPLYFIAQIEDINDLKQSEQENQRLMERITQANEALFQEKERLHITLD
                     SIGEAVVCIDVAMNITFMNPIAEKMSGWRQEDALGAPLLTVLRITSGNKGPLLEDIYR
                     ANRSRSDMEQEIVLHCHNGGSYDIHYSITPLSTLDGDKIGSVLVIQDVTESRKMLRQL
                     SYSATHDALTQLANRASFEKQLQQRLQTIQESPQHHALVFIDLDRFKAVNDSAGHAAG
                     DALLRELASLMLSMLRSGDLLARLGGDEFGLLLPDCNSDSARFIATRLINAVNEYHFM
                     WEGRLHRIGASAGITMINEHNCQLTEVVSQADIACYAAKNSGRGRLTVYEPQHALTSS
                     KGMMPLEEQWHMIKNNLLLMLARNVAPPRTPEATSFWLVSLRLWTSEGEVMEERAFRA
                     GLADSALHHALDRRVFHEFFRHAATAVASKGLSVALPLSAAGLYSATLIDELLEQLEH
                     SPLPPRLLHLIIPADVIVKQAQTAAATLRKLRQRGCQVILSHVGRDLQLFNLLPPHIV
                     DYLLLDSDLIANVHESLMDEMLTSIIQGHAQHLDIKTLAGPVQNPQVLDTLSRIGVDL
                     IYGDTIAEAQPLDLLLNTSYFAIH"
     gene            3563..4204
                     /gene="udk"
                     /locus_tag="MOX77_004329"
     CDS             3563..4204
                     /gene="udk"
                     /locus_tag="MOX77_004329"
                     /EC_number="2.7.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine kinase"
                     /protein_id="HCA3359714.1"
                     /translation="MTDQSHQCVIIGIAGASASGKSLIASTLYRELREQVGDEHIGVI
                     PEDSYYKDQSHLSMEERVKTNYDHPNAMDHSLLFQHLQALKRGSAIELPVYSYVEHTR
                     MQETVRVEPKKVIILEGILLLTDARLREEMNFSIFVDTPLDICLMRRIKRDVNERGRS
                     MDSVMAQYQKTVRPMFLQFIEPSKQYADIIVPRGGKNRIAIDILKAKISQFFE"
     gene            4295..>4730
                     /gene="dcd"
                     /locus_tag="MOX77_004330"
     CDS             4295..>4730
                     /gene="dcd"
                     /locus_tag="MOX77_004330"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004942378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HCA3359715.1"
                     /translation="MRLCDRDIEAWLDEGRLSITPRPPVERINGATVDVRLGNKFRTF
                     RGHTAAFIDLSGPKDEVSAALDRVMSDEIVLPDGEAFYLHPGELALAVTFESVTLPPD
                     LVGWLDGRSSLARLGLMVHVTAHRIDPGWSGCIVLEFYNSGKL"
BASE COUNT         1116 a         1227 c         1286 g         1101 t
ORIGIN      
        1 gccggatatt gagcagagcg ttaaaaattt acaaacattt ccgggaattg gccgctggac
       61 ggcgaactat ttcgccctgc gcggttggca ggcaaaagat atctttttgc ccgatgatta
      121 cttaattaag cagcgcttcg ccgggatgac ggccgcgcag atccgtcgct acgcggagcg
      181 ctggaaaccg tggcgttcct acgcgctact gcatatctgg tatacccacg gctggcaacc
      241 gtcaatggat agcgaaatag ctggtattca gtaacaaatc cagcggttgc gcttcggcga
      301 tagtgtcgcc ataaatcaga tccacgccaa tacgggagag cgtatccagc acctgtgggt
      361 tttgtaccgg cccggcgagc gttttgatgt ccagatgctg ggcgtgtccc tggatgatcg
      421 aggtcagcat ttcatccatt aaactttcat gaacgttggc gataaggtcg ctatccagca
      481 gtaaataatc gacgatatgc gggggcagta aattaaacag ctgtaaatcg cgcccgacat
      541 ggctgagaat cacctggcag ccgcgttgcc gcagttttcg cagagtcgca gcggcggtct
      601 gcgcctgctt aacgataacg tcagccggga taatcaggtg taataaccgt ggcggcagtg
      661 ggctatgctc cagttgttcc agcagctcat caataagggt cgcgctgtat aatcccgcgg
      721 cggacagcgg cagcgcaacg cttaatccct tgctggcgac ggcggtcgcc gcatggcgga
      781 aaaactcatg gaatacccgt cggtcaagcg cgtgatgcag cgcggagtcg gctaaccctg
      841 cccggaacgc gcgctcttcc atcacttccc cttcgctggt ccacagcctg agtgagacca
      901 gccaaaagct ggtggcctcc ggcgtacgcg gcggcgcgac gtttctggca agcattagca
      961 ggaggttatt tttaatcata tgccactgtt cttccagcgg catcattccc tttgaggagg
     1021 ttaatgcgtg ctgcggttcg tacacggtca gacggcctcg accgctattt ttcgcggcgt
     1081 agcaggcaat atcggcctga gacacgacct ctgtgagctg gcagttatgt tcatttatca
     1141 ttgtgatccc ggcgctggcg ccgatccgat gcaggcgtcc ttcccacata aagtgatatt
     1201 cattaacggc gttgataagc cgcgtcgcga taaagcgcgc gctgtcacta ttacaatccg
     1261 gtagcaacag gccaaactca tcgccaccca ggcgggccag gagatcgccg gagcgaagca
     1321 tactgagcat cagtgacgcg agctcgcgca ataaggcatc gccggcggca tgtcccgcgc
     1381 tgtcgttaac cgctttaaaa cggtccagat cgataaacac cagcgcatga tgttgaggcg
     1441 attcctgtat tgtttgcagg cgctgttgca gctgtttttc aaaactggcg cggttggcaa
     1501 gttgggtgag ggcgtcatgc gttgcgctgt agctgagctg gcgtaacatt tttcgtgatt
     1561 cggtaacgtc ctggataacc agaaccgaac caatcttatc gccgtcaagc gtactgagcg
     1621 gcgtgatact gtaatgaata tcgtagctac cgccgttatg acaatggagc actatctcct
     1681 gttccatgtc cgatcgcgac ctgttggcgc gataaatatc ctccagcagc ggccccttat
     1741 tacctgacgt aatgcgcaga accgttaata atggcgcgcc taaagcatcc tcttgccgcc
     1801 agccgctcat cttctcggcg atcggattca taaaggtgat attcatcgcg acatcaatac
     1861 acaccaccgc ttctccgata gagtcaagcg tgatgtgcaa ccgttctttt tcctgaaaca
     1921 gcgcctcgtt cgcctgtgta atacgctcca tcaaccgctg gttttcctgc tcgctttgct
     1981 tgagatcgtt aatatcttca atctgagcaa taaaatagag aggttgattg tctttatgac
     2041 gaaccagcga gacggccagc agcgcccaga cgacatcgcc gttgcgggtg tagtagcgtt
     2101 tttccatgga atagctgttg atgtcgccgc gcaccagcat gtttagctgt tcaaggtcgt
     2161 tattcaggtc ttccggccag gtcaattgct gaaatgtcat cgtgcgtaat tcatcctggc
     2221 tatagccaag aaaatggctc agagatttat tgacctgtag ccactgaccc tccgtaccga
     2281 ccagcgccat accaatggcg gaatactcca tcgcgttgcg aaagcgggat tcgctctcgg
     2341 tgatatgttt gcgctccgtg cgaaacgcgt acatcaccat cgtcatcata ttggcaggca
     2401 gcaggatcat taaaaaaggc agccacggca tattgaccat cacgtcggtt ttcggcgtgg
     2461 cgagcagcgt ggggtcattg gccagcatga gcgagaccac gataacggta gctaaaaaaa
     2521 ttaaaaacgc ctccattcgc ggcaggcgca ccgcactcca catcaacagg acgataacgc
     2581 acgtaaacgg ccacggaata tagcgcatag cgagccagct tagcgccagc gtaatgacca
     2641 gcgtcaatag cgtttccagc aacagatgcg ggtcgcgatg acgcaacaga tagtgtggtt
     2701 taaacagtaa acctaacggc accagcgtca gcgcgccgat ggcttccgat aatacccaaa
     2761 tcagaaacgc tttcgaggcg accgcttccg gcgctatcag ccaaaataac aggccgccga
     2821 gtagcggcgg aatcacggcg ctgccgatag ccagacgaaa ccagtcattc aaattttgta
     2881 aggggttgta gctggggagc agttttcgta gcagtatcgc gccagtggcc gcctcgataa
     2941 tatttattgc cgtccagcta aagttaagcg aggcggcagg aaataaagtc agtgaggcgc
     3001 cgatgctgcc gagcgagcag gcgaccgcga tcccaggcca cagacggccc gcatggcggt
     3061 aaaacgcgac catcataatg gaggtgggga accacagcgg cgcgagttgg gtgccgacac
     3121 gcgataatac gagcgaaaag agcgtaaaga caaacgcgac caggcctaaa ctgaccagac
     3181 gcaatagcgg gtgggggacg gtaacgaaaa catgttggga tggtttactc attaccactc
     3241 tatccgaatc gccggtaacg tcgcggaata ccggacgcgt cagtttactc tgtgattatg
     3301 ctagtataaa cgcgtaatga tttatacgct gactgaatat aaattgtggc tcccggcgta
     3361 ttcctcctcc agacgggtcg ataaatccgc tgtccgcatt aaaactgaac gcttttacgt
     3421 cgcgacgtcg aatgcgccgc caacaaattc accgtggcat agcgccggac tggtatcgcg
     3481 ctgctgaaat ccctataatt gccgcgtttg gcgtttcggc gccccccttc tttacatcca
     3541 ggttaatcag gtcgctaaat ttatgactga tcagtctcat cagtgcgtca ttatcggtat
     3601 cgctggcgca tcggcttccg gcaagagtct tattgccagt accctttacc gcgaattgcg
     3661 tgaacaagtg ggtgacgaac atattggcgt tattcccgaa gacagttatt acaaagatca
     3721 aagccatctg tcgatggaag aacgcgtaaa aactaactat gaccatccga atgcgatgga
     3781 tcacagcctg ctatttcagc atcttcaggc gctcaagcgc ggttcggcga ttgaattacc
     3841 ggtatacagt tatgttgagc atacccgtat gcaggaaacg gttcgcgtag aaccgaagaa
     3901 agtgattatt cttgaaggta ttctgttact gaccgacgcg cgtttgcgtg aagagatgaa
     3961 cttctctatt tttgtcgata cgccgctgga tatctgtttg atgcgccgta tcaaacgcga
     4021 tgtgaacgag cgtggtcgct caatggattc ggtgatggcg caatatcaga aaacggtgcg
     4081 tccgatgttc ctgcaattta ttgagccttc caaacaatat gcggatatta tcgtgccgcg
     4141 cggcggtaaa aaccgcatcg ctattgatat tctgaaagcg aaaatcagcc agttctttga
     4201 ataaatctgg cgaattgtgt accgttcagt gataacctgg ttagcccttg atgtgcttga
     4261 tttaagggct tgatgcgcga aaggagaaag tgccatgcgt ttatgcgacc gagatattga
     4321 agcctggctg gatgaaggcc gtttgtctat caccccgcga cctcccgtag agcgcattaa
     4381 cggcgcgacg gtcgatgtac gtcttggcaa taaatttcga accttccgtg gccatacggc
     4441 ggcgtttatc gatctgagcg ggccgaaaga tgaggtcagc gcggcgttgg atcgcgtgat
     4501 gagcgatgaa atcgttttgc cggacggcga ggcattttat ctgcatccag gcgaattggc
     4561 gctggccgtc acctttgaat ccgttaccct gccaccggat ttagtgggct ggctggatgg
     4621 tcgttcctcg ctggcgcgtc tgggactgat ggtgcatgtg acggcgcacc gtatcgatcc
     4681 cggctggtcg ggctgcattg tgcttgagtt ttacaactcc gggaagctgc
//
LOCUS       DAGWFR010000245         4718 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.248, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000245 DAGWFR010000000
VERSION     DAGWFR010000245.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4718)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4718)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4718
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.248"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..160
                     /locus_tag="MOX77_004331"
     CDS             <1..160
                     /locus_tag="MOX77_004331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3359716.1"
                     /translation="AAQSITQLSEFLNERWKGVQPVAWGDALRESEFTRWVYQGLCGL
                     EKEHQDEI"
     gene            150..1409
                     /gene="glpB"
                     /locus_tag="MOX77_004332"
     CDS             150..1409
                     /gene="glpB"
                     /locus_tag="MOX77_004332"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase subunit GlpB"
                     /protein_id="HCA3359717.1"
                     /translation="MKFDTVIMGGGLAGLLCGLQLQQHGLRCAIVTRGQSALHFSSGS
                     LDLLSALPNGQPVTDITAGLDALRRQAPEHPYSRLGAQKVLTLAQQAQTLLNASGAQL
                     YGDVQQAHQRVTPLGTLRSTWLSSPEVPVWPLSAQRICVVGVSGLLDFQAHLAAASLR
                     QRDLNVETAEIDLPELDVLRDNPTEFRAVNIARLLDNEEKWQLLYDALSPIATNCDMI
                     IMPACFGLANDTLWRWLNERLPCALTLLPTLPPSVLGIRLHNQLQRQFVRQGGIWMPG
                     DEVKKVTCRRGTVSEIWTRNHADIPLRPRFAVLASGSFFSSGLVAEREGIREPILGLD
                     VQQTATRAEWYQQHFFDPQPWQQFGVVTDDAFRPSLAGNTVENLYAIGSVLAGFDPIA
                     EGCGGGVCAVSALQAAHHIAERAGEQQ"
     gene            1406..2596
                     /gene="glpC"
                     /locus_tag="MOX77_004333"
     CDS             1406..2596
                     /gene="glpC"
                     /locus_tag="MOX77_004333"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic glycerol-3-phosphate dehydrogenase
                     subunit C"
                     /protein_id="HCA3359718.1"
                     /translation="MSDTRFESCIKCTVCTTACPVSRVNPGYPGPKQAGPDGERLRLK
                     DGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKYDTTRPSLRNFILSHTDLMG
                     SVSTPFAPVVNTATALKPVRQLLDYALKIDHRRTLPKYSFGTFRRWYRSVAAQQAKYK
                     DQVAFFHGCFVNYNHPQLGKDLIKVLNAMGTGVQLLSKEKCCGVPLIANGFTDKARKQ
                     AISNVESLREAIAVKGIPVIATSSTCTFALRDEYPEVLDVDNAGLREHIELATRWLWR
                     KLDAGKTLPLNPLPLKVVYHTPCHMEKMGWTLYTLELLRQIPGLELTVLDSQCCGIAG
                     TYGFKKENYPTSQSIGAPLFRQIEESGADIVVTDCETCKWQIEMSTSKRCEYPITLLA
                     KALG"
     gene            3022..4044
                     /gene="sseL"
                     /locus_tag="MOX77_004334"
     CDS             3022..4044
                     /gene="sseL"
                     /locus_tag="MOX77_004334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001017745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPI-2 type III secretion system effector
                     deubiquitinase SseL"
                     /protein_id="HCA3359719.1"
                     /translation="MNICVNSLYRLSTPQFHSLYSEEVSDEALALLFSAVENGDQNCI
                     DLLCNLALRNDNLGHRVEKFLFDLFSGKRSGSPDIDKKINQACLVLHQIANNDITKDN
                     TEWKKLHAPSRLLYMAGSATTDLSKKIGIAHKIMGDQFAQTDQEQVGVENLWCSARML
                     SSDELAAATLGLVQESPLLSVNYPIGLIHPTTKENILRTQLLEKMAQSGLSENEVFLI
                     NTGDHWLICLFYKLAEKIKCLIFNTYHDLNENTKQEIIEAAKIAGISENEDIDFIETN
                     LQNNVPNGCGLFCYHTIQLLSNAGQNDPATTLREFAENFLTLSVEEQTLFNTQTRRQI
                     YEYSLQ"
     gene            complement(4131..4307)
                     /locus_tag="MOX77_004335"
     CDS             complement(4131..4307)
                     /locus_tag="MOX77_004335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-binding protein"
                     /protein_id="HCA3359720.1"
                     /translation="MPDGTYALRVRFSANRYSLAIRQEVCAMMALNMLRRWLNGEDIT
                     SEHGWIDVVESLTA"
     gene            complement(4313..>4718)
                     /locus_tag="MOX77_004336"
     CDS             complement(4313..>4718)
                     /locus_tag="MOX77_004336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461231.1"
                     /note="catalyzes the retro-aldol cleavage of
                     2-keto-3-deoxy-L-rhamnonate to pyruvate and lactaldehyde;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="2-keto-3-deoxy-L-rhamnonate aldolase"
                     /protein_id="HCA3359721.1"
                     /translation="RIDNYMAQANESLCLLVQVESKVALENLDAILEVEGIDGVFIGP
                     ADLSASLGYPDNAGHPEVQRIIESCIYRIRAAGKAAGFLAVDPAMAQKCLAWGANFVA
                     VGVDTMLYTEALDSRLAMFKSVQSVSTAKRSY"
BASE COUNT         1221 a         1230 c         1145 g         1122 t
ORIGIN      
        1 cgcggcgcaa tctattacgc aactctctga atttctgaat gagcgctgga aaggcgtaca
       61 acctgtcgcc tggggagacg cgctgcgcga aagcgaattc acgcgctggg tttatcaggg
      121 attatgcggt ctggagaagg agcaccagga tgaaatttga tacggttatt atgggcggcg
      181 gtctcgccgg tttgctatgc ggactgcaac tccagcagca tggattacgc tgcgccatcg
      241 tcacccgcgg acaaagcgcg ctgcattttt cctccggctc gctggatcta cttagcgccc
      301 tgcccaacgg ccaaccggtg accgacatta ccgccgggct tgatgcgctg cgccgccagg
      361 cgcctgaaca tccttattcg cgtttaggcg cgcaaaaagt ccttacgctg gcgcaacagg
      421 cgcaaacgct acttaacgcc agcggcgcgc agttatacgg cgacgtacag caggcgcacc
      481 agcgtgtcac gccgcttggc acattgcgtt ctacctggct tagctcgccg gaagtaccgg
      541 tctggccgtt atccgcacag cgaatttgcg tcgtcggcgt tagcggatta ctggatttcc
      601 aggcgcacct tgcggcagcg tcgctgcgcc aacgcgacct caacgttgaa accgcagaaa
      661 tcgaccttcc ggaactggac gtactgcgtg ataacccgac ggaatttcgc gcggtcaata
      721 tcgcgcgtct gcttgataac gaagaaaaat ggcagctgct gtacgacgcg ctgtcgccaa
      781 tagcgacaaa ctgcgacatg atcatcatgc ccgcctgttt cgggctggcg aacgatacgc
      841 tgtggcgctg gcttaacgaa cgtctgccct gcgcgctcac gctgctgccg acgctgccgc
      901 catcggtgct cggtattcgt ctgcacaatc aactccagcg ccagtttgtc cgtcagggcg
      961 gcatctggat gccgggcgat gaagtgaaga aagtcacctg ccgtcgcggt accgtgagcg
     1021 aaatatggac ccgcaaccat gccgatatcc cactgcgccc gcgttttgcc gtacttgcca
     1081 gcggtagctt ctttagtagc gggctggttg ccgagcgcga agggatccgc gaacctattt
     1141 tagggctcga cgtacagcaa acggccaccc gcgccgaatg gtatcaacaa catttcttcg
     1201 acccacagcc ctggcagcag tttggcgtcg tgacggatga cgctttccgc ccctcccttg
     1261 cgggcaacac ggtagaaaat ctgtatgcaa taggttctgt gctggcggga ttcgatccta
     1321 tagctgaggg atgcggcggc ggcgtctgcg cagtcagcgc cctccaggcc gcgcaccata
     1381 tcgctgagcg tgcaggagaa cagcaatgag cgacacacgt tttgaaagtt gtattaaatg
     1441 tacggtgtgc accaccgcgt gcccggtcag ccgcgttaat cctggctacc ctggccctaa
     1501 acaggccgga ccggatggcg aacgcctgcg tctgaaagac ggcgcgctgt atgatgaggc
     1561 gctgaaatat tgcattaact gcaaacggtg tgaggtcgcc tgtccgtcgg acgtgaagat
     1621 tggcgatatc atccagcgcg cccgcgcgaa atacgatacg acgcgcccgt cattgcgtaa
     1681 ctttattctc agccataccg atctgatggg cagcgtttca acgccgttcg cgccggtggt
     1741 caataccgcc accgcattaa agccagtgcg ccagttgctt gattacgcgc tcaaaatcga
     1801 tcatcgccgc accttaccaa aatactcttt cggcaccttc cgccgctggt atcgtagcgt
     1861 ggcggcgcag caggctaaat acaaagatca ggtcgccttt ttccatggct gttttgtgaa
     1921 ttacaaccat ccgcagctcg gaaaagatct gattaaggtg ctgaacgcaa tgggtactgg
     1981 cgtacagtta ctgagtaaag agaagtgttg cggcgtaccg ctgatcgcta acggttttac
     2041 ggataaagct cgcaaacagg ctatcagcaa tgtggagtcg ctacgagagg cgattgccgt
     2101 caaaggtatt ccggtcatcg ccacgtcatc cacctgtacg tttgcgttgc gcgatgaata
     2161 tcctgaagtg ctggacgtgg acaacgccgg gctgcgcgaa catatcgagc tggccacccg
     2221 ctggctatgg cgcaaactgg atgccgggaa aacgctgccg cttaatcctt tgccgctgaa
     2281 agtggtctac catacgccgt gtcatatgga aaaaatgggc tggacgcttt acacgcttga
     2341 actgttgcgg caaattccgg ggcttgaatt gacggtactt gattcacagt gctgcggcat
     2401 tgccggtacg tatggattta aaaaggaaaa ctatccgaca tcacagtcca tcggcgcgcc
     2461 gctgttccgc cagattgaag agagcggcgc cgacattgtc gtcaccgatt gtgaaacctg
     2521 taagtggcaa attgagatgt ctacaagcaa acgctgcgaa taccccatta cgctactggc
     2581 gaaagcgctg ggctaagtaa aaagcgccgg agcccctccg gcgccattac tctactcacc
     2641 agggccgatt ttccatcaga catataccct tcatacttca agttgcttat gtgttggcta
     2701 cggattattt tgggtataaa cgcggatgtc tctttgcaat aacctgccct atttggttaa
     2761 ccatgaccgc taacccacgg tggcatgaca gataacgacg ttactgttta tagagcaata
     2821 tctcttgtat cgccgcgtta ccagcctcct ttaaagaggg ggataactga atatctccaa
     2881 taataattga gtgttatgtg aataataata aaatcaggtc tatgcctgat ttaatatatc
     2941 tcccactaac aataatattt ttacaaataa ttatacatga catcatattc gttactttca
     3001 cctaccagga aacagagcaa aatgaatata tgtgtaaatt cactttaccg attgagcaca
     3061 ccgcaatttc acagtttata ttcagaagag gtgagcgatg aggcgcttgc gttgttgttt
     3121 agcgccgtag agaacggtga tcagaattgt attgatctgt tatgcaatct tgcgttacgc
     3181 aatgataacc tgggacatag agttgagaaa tttctttttg atctctttag cggaaaaaga
     3241 tcgggatcac cagacataga caaaaaaatc aatcaggctt gccttgtatt acatcaaatc
     3301 gccaataacg atataacaaa agataatact gagtggaaaa agctacatgc cccttccaga
     3361 ttactttata tggccggttc cgcgacaacc gacctttcta aaaaaatagg aatagcacat
     3421 aaaattatgg gcgaccagtt cgctcagaca gatcaagaac aggtaggagt tgaaaatctt
     3481 tggtgtagtg cgcgaatgtt gtcgtcagat gagctagcag ccgcaacgct aggtctggtt
     3541 caagaatcac ctcttctctc ggtaaactat cctattgggc ttattcatcc taccaccaaa
     3601 gaaaatatat tacgcactca gctacttgaa aagatggctc aatcaggatt atctgaaaat
     3661 gaagtctttc tgataaatac aggagatcac tggcttatct gtttatttta taaacttgca
     3721 gaaaaaataa aatgccttat atttaatact tatcatgatt taaatgaaaa tactaagcaa
     3781 gagattatag aagcagcaaa aattgcaggc atatcagaaa acgaagatat tgattttatt
     3841 gaaaccaatt tacaaaataa tgtacccaac ggctgtggtc tattttgtta ccatacaatt
     3901 caactcttat cgaatgcagg acaaaacgat cctgctacca cactacgaga atttgcggaa
     3961 aatttcttaa cgctttcagt agaggaacaa acactattta acacccaaac ccggcgacaa
     4021 atatatgaat acagtctcca gtaatggcga gtacttatcc tgaaatgatg ctctgccaag
     4081 aatttataag tatataagga tgggaaggcc aagccttccc actaaaagtt ctatgccgtc
     4141 aatgattcaa ccacgtctat ccagccatgc tcgctggtaa tgtcctcgcc attaagccag
     4201 cggcgcagca tatttagcgc catcatcgcg cagacctcct gacgtattgc caggctatac
     4261 cgattggcgc taaaacgtac gcgtaaggca tacgtgccat ccggcatttt tctcaataac
     4321 tacgttttgc cgtgcttact gactgaacag atttaaacat cgccaacctg ctgtccagcg
     4381 cctcggtgta gagcatcgta tctaccccga ccgcgacaaa attcgcgccc cacgccagac
     4441 atttctgcgc cattgccgga tcgaccgcca aaaaacccgc cgcttttccg gcggcgcgaa
     4501 tacgataaat acacgattca atgattcgct gcacttccgg gtgtccggca ttatcggggt
     4561 aacccaatga agcagagaga tctgccggac cgataaagac gccatcaatg ccttcaacct
     4621 ccagaatcgc gtcaaggttt tccagcgcca ctttgctttc aacctgcacc aacaggcaga
     4681 gcgactcatt ggcctgtgcc atatagttgt cgattctc
//
LOCUS       DAGWFR010000246         4639 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.249, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000246 DAGWFR010000000
VERSION     DAGWFR010000246.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4639)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4639)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4639
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.249"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..2420
                     /gene="torA"
                     /locus_tag="MOX77_004337"
     CDS             <1..2420
                     /gene="torA"
                     /locus_tag="MOX77_004337"
                     /EC_number="1.7.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="trimethylamine-N-oxide reductase TorA"
                     /protein_id="HCA3359722.1"
                     /translation="GAATKEGILTGSHWGAIRATVVDGRFVAAKPFEQDKYPSKMIAG
                     LPDHVHNAARIRYPMVRVDWMRKGHQSDTSQRGDNRFVRVSWDEALDLFYQELERVQK
                     TYGPSALLTASGWQSTGMFHNASGMLARAIALHGNSVSTGGDYSTGAAQVILPRVVGS
                     MEVYEQQTSWPLVLQNSKTIVLWGSDMVKNQQANWWCPDHDVYQYYEQLKEKVASGAI
                     SVISIDPVVTSTHDYLGRDKVKHIAINPQTDVPLQLALAHTLYSEKLYDKNFLDNYCV
                     GFDQFLPYLLGEKDGQPKDAAWAEKLCGIDADTIRALARQMAGDRTQIIAGWCVQRMQ
                     HGEQWSWMVVVLAAMLGQIGLPGGGFGFGWHYNGAGTPGRKGIILSGFSGSTTVPPVH
                     DSTDYKGYSSTIPIARFMDAILEPGKIINWNGKSVKLPPLKMCVFAGTNPFHRHQQIN
                     RIIEGWRKLETVIAIDNQWTSTCRFADIVLPATTQFERNDLDQFGNHSNRGIIAMKQV
                     VSPQFEARNDFDIFRDLCRRFNREAAFTEGLDEMGWLKRIWQEGSQQGKGRGIHLPTF
                     EVFWNQQEYIEFDHPQMFVRHQAFREDPDLEPLGTPSGLIEIYSKTIADMQYDDCQGH
                     PMWFEKIERSHGGPGSQRWPLHLQSVHPDFRLHSQLCESETLRQQYAVGGKEPVFINP
                     QDASARGIRNGDIVRVFNARGQVLAGAVVSDRYAPGVARIHEGAWYDPDKGGDLNALC
                     KYGNPNVLTLDTGTSQLAQATSAHTTLVEIEKYTGPMDNVTAFNGPAEMVAQCEYVPA
                     SQGNPHD"
     gene            2413..3045
                     /gene="torD"
                     /locus_tag="MOX77_004338"
     CDS             2413..3045
                     /gene="torD"
                     /locus_tag="MOX77_004338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone TorD"
                     /protein_id="HCA3359723.1"
                     /translation="MIKQPALAQEQYACVYAWLALLFFREVDDEGLIQLQSAEIADWL
                     ALLKRQPALAASVALLEQKIAALSLRQDAQLELAADFCGLFLMTDKKSALPYASQYPQ
                     QEPGMIKHLLLEAGMEVNDDFKEPADHLAIYLELLSHLHFSLGESFQQRRMNKLRQKT
                     LSSLLEWLPEFTNNCLKHDPYGFYAALSQLLLAIVRFDDGKEDLSIVAVE"
     gene            3235..4635
                     /locus_tag="MOX77_004339"
     CDS             3235..4635
                     /locus_tag="MOX77_004339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c peroxidase"
                     /protein_id="HCA3359724.1"
                     /translation="MKKITLYATTVITVGLLCYLGLSGYVWYYDKQRSKKSDVQASVV
                     GENNKILGYFREKGCDYCHTPSAELPFYSSFPVAKQLMDYDIQLGYKSFNLEAVRAAL
                     IADTPVPQSELNKIEWVMQHQTMPPTRYVALHWAGGVSDKERTDILNWIADQRERNYA
                     SADTDPAHRNEPVQPIPRNIPVDAKKVDLGFRLYHDERLSGDSTISCAHCHALNAGGV
                     DGRKTSIGVGGAVGPINAPTVFNSVFNIEQFWDGRAATLQEQAGGPPLNPIEMASKSW
                     DEIISKLDKDPVLKKDFQAVYPQGFTGENITDAIAEFEKTLITPDSAFDKWLRGDENA
                     LTAQQKHGYQLFKENKCATCHGGIILGGRSFEPLGLKRDFNFGEITAADIGRMNVTKE
                     VRDKLRQKVPGLRNVALTAPYFHRGDVPTLDGAVKLMLRYQVGTDLPQNDIDDIVAFL
                     ESLTGVYTPYQPEYAQ"
BASE COUNT         1163 a         1122 c         1270 g         1084 t
ORIGIN      
        1 caggcgccgc gacgaaagag ggtatcctta ccggttctca ctggggggcg attcgcgcca
       61 cggtggttga cggtcgattt gtggcggcaa aaccgtttga acaggataaa tacccgtcca
      121 aaatgatcgc cggtctgccc gatcacgtcc acaacgcggc gcgtattcgc tatccgatgg
      181 tgcgcgtcga ctggatgcgc aaaggtcatc aaagcgacac ctcgcagcgc ggcgataatc
      241 gttttgtgcg cgtctcctgg gatgaagcgc tggatctgtt ctatcaggaa ctggagcggg
      301 tgcaaaaaac ctacgggccg agcgcgttac tgacggcgag cggttggcaa tctaccggca
      361 tgttccataa cgcctccggg atgctggcgc gcgcgattgc gctacatggc aatagcgtca
      421 gcacgggagg ggactattcg accggcgcgg cgcaggtgat tctgccgcgt gtggtgggtt
      481 caatggaagt gtacgagcag caaacgtcat ggcctctggt tttacagaac agtaaaacga
      541 ttgtgctatg gggttctgat atggtgaaaa accagcaggc aaactggtgg tgcccggatc
      601 acgatgtcta tcagtactat gaacaattaa aagagaaggt tgccagcggc gctatctcgg
      661 tcatcagcat cgacccggtc gtcacctcca cgcacgatta tctggggcgc gataaggtca
      721 aacatatcgc cattaacccg cagacggatg tcccgttaca actggcgctg gcgcataccc
      781 tgtacagcga gaaactgtac gataaaaatt tcctcgataa ctactgcgtc ggttttgacc
      841 agttcctccc ctatttgctg ggcgagaaag atggacagcc caaagatgcc gcctgggcgg
      901 aaaaactgtg cggtattgac gccgacacca tccgcgcgtt ggcgcggcag atggcgggcg
      961 acagaacgca aatcatcgct ggctggtgcg tacaacgtat gcagcatggc gaacagtggt
     1021 catggatggt cgtcgtgctg gcggcaatgc tgggacagat tggtttaccg ggcggcggct
     1081 ttggttttgg ctggcactat aacggcgccg ggacgcctgg tcgtaaaggg atcattttaa
     1141 gcggcttttc cggttcgacg accgttccgc cagtgcacga cagcacggat tacaaaggct
     1201 acagcagcac cattcctatt gcgcgtttta tggatgccat tcttgaaccg ggcaagatca
     1261 ttaactggaa cgggaaatcg gttaaattac cgccgctgaa gatgtgcgtg ttcgccggga
     1321 ccaacccgtt ccaccgacac caacaaatta accgcataat tgaaggctgg cgcaagctgg
     1381 aaacggtcat cgctattgat aaccagtgga cgtcgacctg ccgctttgcg gatatcgttt
     1441 tgccggctac cacccaattt gagcgtaacg acctcgatca gttcggcaac cactctaacc
     1501 gcggcattat cgccatgaaa caggtggtgt cgccgcagtt tgaagcgcgt aacgactttg
     1561 atattttccg cgatctctgc cgacgcttta accgtgaagc ggcattcacg gaaggtcttg
     1621 atgaaatggg ctggctgaaa cgcatctggc aggaagggag ccagcaggga aaaggtcgcg
     1681 gtatccactt accgactttc gaggtgttct ggaatcaaca ggagtacatc gagtttgatc
     1741 atccgcagat gtttgtgcgc catcaggctt tccgtgaaga tccggacctg gagccgttgg
     1801 gcacgccaag cggtttgatc gagatttact ccaaaacgat cgccgacatg caatacgacg
     1861 attgtcaggg ccatcccatg tggttcgaaa aaatcgaacg ctcgcatggc gggccgggat
     1921 cgcagcgctg gccgctgcac ttacagtccg tccaccctga tttccgtctg cattcccaac
     1981 tgtgcgagtc ggaaacgctg cgtcagcaat atgccgttgg cggcaaggag ccggtcttta
     2041 ttaacccaca ggatgccagc gcgcgcggga tccgcaacgg tgacatcgtg cgggtattca
     2101 atgcacgcgg gcaggtactg gcgggagcgg tagtttccga tcgctatgcg ccgggcgtgg
     2161 cgcgaattca tgaaggtgcc tggtacgatc ctgataaagg cggcgatctc aacgcgttat
     2221 gtaagtacgg caaccctaac gtattaacgc tggataccgg tacatcacag ctcgcgcagg
     2281 cgaccagcgc gcatacgacg ctggtggaaa ttgaaaaata taccggtcct atggataacg
     2341 tcacggcgtt taacggtccg gccgagatgg tcgcgcagtg tgaatatgta cccgcatcgc
     2401 aggggaatcc gcatgattaa gcagccagcg cttgctcagg aacagtacgc ctgcgtatat
     2461 gcatggctgg cgttactctt tttccgggaa gtggatgatg aagggttaat acaattacag
     2521 tccgcggaaa tcgcggactg gctggcgctg ttaaagcgtc agccagcgct ggcggcgtcg
     2581 gtggcgttac tcgaacaaaa aattgccgcg cttagcctgc gtcaggatgc gcagctggag
     2641 ctggccgcgg atttttgcgg attgttcctg atgacggata aaaaatcggc cttgccctac
     2701 gcctcgcaat acccgcagca ggaacccggc atgattaaac atttattgct tgaagccggg
     2761 atggaagtca acgacgattt taaagagccg gccgaccact tggcgattta tctggaatta
     2821 ctcagccatt tacatttttc attgggtgaa tcgttccaac aacggagaat gaataaatta
     2881 cgccagaaaa cattatcgtc attactggag tggcttccgg aatttacaaa taattgcctt
     2941 aagcatgatc cctatggttt ttatgctgcg ttaagtcaat tattgttggc tatcgttcgt
     3001 tttgatgacg gaaaagagga tttatccatt gttgcggttg aataaaccct gtgacgggca
     3061 tcgcaaaata aatcttacga tagtcggggg ttatcatatc tataggttta gccaattgta
     3121 attattgata ccaatcaata tccatgatgg gtttgtattt agtattgacg ggcctcatga
     3181 gtaaaaaaat aaaatttaat taattatgcc gcaatacccc ataaggatag tgatatgaaa
     3241 aaaattaccc tctatgcgac aacggttatc accgttgggc tgttatgtta tttaggtttg
     3301 tccgggtatg tatggtatta cgacaaacag cgcagtaaaa aaagcgatgt gcaggcctcg
     3361 gttgtgggtg aaaataataa aatactgggt tatttcaggg agaaaggatg tgattattgt
     3421 catacgcctt ccgctgaatt gcctttttat tcctcttttc cggtggcaaa gcagctaatg
     3481 gattacgata tccagctcgg ctacaagtcg tttaacctgg aggcggtacg ggccgccctg
     3541 attgcggata cgccggtgcc gcaaagcgaa ctgaataaaa ttgaatgggt tatgcaacat
     3601 cagactatgc caccaacccg ctatgtcgcg ctgcactggg cggggggcgt cagcgataaa
     3661 gagcgtactg acatcctgaa ctggatagcc gatcagcgtg agcgcaacta tgccagcgcc
     3721 gataccgacc ccgcacaccg gaatgaaccc gttcagccta ttccgcgcaa tattcccgtc
     3781 gatgcgaaaa aagtcgactt aggtttccga ctttatcatg atgaacgttt atccggcgac
     3841 agcacaatat cctgtgcgca ttgtcacgcg ttaaatgcgg gcggtgtcga tggcagaaaa
     3901 acctcaattg gcgttggcgg tgcggtaggg ccaataaatg cgccgacggt attcaactcc
     3961 gtatttaata tcgaacaatt ttgggatggt cgtgctgcaa ccctgcagga gcaagcaggc
     4021 ggaccgccgt taaatcctat tgaaatggcc tctaaatcct gggatgaaat tattagcaag
     4081 cttgataaag accctgtcct gaaaaaagat ttccaggcgg tttatccgca aggatttacc
     4141 ggggaaaata ttactgatgc gatcgccgaa ttcgaaaaaa cgttgataac gccggattcc
     4201 gcttttgata aatggctacg tggagatgaa aatgcgctga ccgcgcaaca gaaacacggt
     4261 tatcaattat ttaaagaaaa taaatgtgca acctgtcacg gcggtatcat tttaggcggg
     4321 cgctcttttg aaccattggg attaaagcga gactttaatt ttggcgaaat taccgcagcg
     4381 gatattggtc gtatgaacgt caccaaagag gttcgcgata aattacggca aaaagtccca
     4441 ggcttacgca acgtcgcgtt aacagcgcct tatttccatc ggggcgacgt accgacgctg
     4501 gatggcgcgg taaaactgat gctgcgttac caggttggca ccgatctgcc gcaaaacgat
     4561 attgacgata tcgtcgcctt cctggaaagc ctgaccggtg tttatacgcc atatcaacct
     4621 gaatatgcgc aatgacaat
//
LOCUS       DAGWFR010000247         4629 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.250, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000247 DAGWFR010000000
VERSION     DAGWFR010000247.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4629)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4629)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4629
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.250"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..267
                     /locus_tag="MOX77_004340"
     CDS             <1..267
                     /locus_tag="MOX77_004340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_447555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="delta-1-pyrroline-5-carboxylate dehydrogenase"
                     /protein_id="HCA3359725.1"
                     /translation="PAAVAARVQFAKAETLMAQPFDAVIFHGDSDKLRTVCEAVAARE
                     GAIVSVQGFARGESNMLLERLYIERSLSVNTAAAGGNASLMTIG"
     gene            326..721
                     /locus_tag="MOX77_004341"
     CDS             326..721
                     /locus_tag="MOX77_004341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme inhibitor LprI family protein"
                     /protein_id="HCA3359726.1"
                     /translation="MKRIFLTCAALLFSSQALADECASASTQLEMNRCAAAQYQAADK
                     KLNETYQSAIKRAQPPQRELLQKAQVAWIALRDADCALIRSGTEGGSVQPMIASQCLT
                     DKTNEREAFLASLLQCEEGDLSCPLPPAG"
     gene            complement(718..1356)
                     /gene="rutR"
                     /locus_tag="MOX77_004342"
     CDS             complement(718..1356)
                     /gene="rutR"
                     /locus_tag="MOX77_004342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator RutR"
                     /protein_id="HCA3359727.1"
                     /translation="MSQRTEKKIGKRSQATGAKRQLILTAALAVFSQYGIHGARLEQV
                     AERAGVSKTNLLYYYPSKEALYVAVMRQILDVWLAPLKAFRAEFSPLEAIKEYIRLKL
                     EVSRDYPQASRLFCMEMLAGAPLLMDELTGDLKALIDEKSALIAGWVHSGKLAPVSPH
                     HLIFMIWAATQHYADFAPQVEAVTGATLRDEAFFNQTVESVQRIIIEGIRVR"
     gene            complement(1493..1660)
                     /locus_tag="MOX77_004343"
     CDS             complement(1493..1660)
                     /locus_tag="MOX77_004343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006819399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="general stress protein"
                     /protein_id="HCA3359728.1"
                     /translation="MANHRGGSGNFAEDRERASEAGRKSGQHSGGNFKNDPQRASEAG
                     KKGGKSSNRNR"
     gene            2045..2641
                     /gene="wrbA"
                     /locus_tag="MOX77_004344"
     CDS             2045..2641
                     /gene="wrbA"
                     /locus_tag="MOX77_004344"
                     /EC_number="1.6.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H:quinone oxidoreductase"
                     /protein_id="HCA3359729.1"
                     /translation="MAKILVLYYSMYGHIETMAHAVAEGAKKVDGAEVIIKRVPETMP
                     PEIFAKAGGKTQNAPVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGA
                     LYGKLGGVFSSTGTGGGQEQTITSTWTTLAHHGMVIVPIGYSAQELFDVSQVRGGTPY
                     GATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG"
     gene            2662..2889
                     /locus_tag="MOX77_004345"
     CDS             2662..2889
                     /locus_tag="MOX77_004345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002898701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YccJ family protein"
                     /protein_id="HCA3359730.1"
                     /translation="MPTQEAKAHRVGEWASLRNTSPEIAEAIFEVAHYDEKLAEKIWE
                     EGSDEVLIKAFEKTDKDSLFWGEQVIERKNV"
     gene            complement(2923..4164)
                     /gene="agp"
                     /locus_tag="MOX77_004346"
     CDS             complement(2923..4164)
                     /gene="agp"
                     /locus_tag="MOX77_004346"
                     /EC_number="3.1.3.10"
                     /EC_number="3.1.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glucose-1-phosphatase/inositol
                     phosphatase"
                     /protein_id="HCA3359731.1"
                     /translation="MKKSLLAVAVAGAVLLSSAVQAQTTPEGYQLQQVLMMSRHNLRA
                     PLANNGNVLAQSTPNAWPAWDVPGGQLTTKGGVLEVYMGHYTREWLVAQGLIPSGECP
                     APDTVYAYANSLQRTVATAQFFITSAFPGCDIPVHHQEKMGTMDPTFNPVITDDSAAF
                     RQQAVQAMEKARSQLHLDESYKLLEQITHYQDSPSCKEKHQCSLIDAKDTFSANYQQE
                     PGVQGPLKVGNSLVDAFTLQYYEGFPMDQVAWGGIHTDRQWKVLSKLKNGYQDSLFTS
                     PTVARNVAAPLVKYIDKVLVAERVSAPKVTVLVGHDSNIASLLTALDFKPYQLHDQYE
                     RTPIGGQLVFQRWHDGNANRDLMKIEYVYQSARQLRNAEALTLKSPAQRVTLELKGCP
                     VDANGFCPLDKFDNVMNTAAK"
     gene            complement(4297..>4629)
                     /locus_tag="MOX77_004347"
     CDS             complement(4297..>4629)
                     /locus_tag="MOX77_004347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein disulfide oxidoreductase"
                     /protein_id="HCA3359732.1"
                     /translation="ERPVLLYFWASWCGVCRFTTPAVAHLAAEGENVMTVALRSGGDA
                     EVARWLARKGVDFPVVNDANGALSAGWEISVTPTLVVVSQGRVVFTTSGWTSYWGMKL
                     RLWWAKTF"
BASE COUNT         1107 a         1284 c         1227 g         1011 t
ORIGIN      
        1 cccgccgccg tcgcggcgcg tgtccagttt gcgaaagcgg aaacgctgat ggcgcagccg
       61 tttgacgcgg tgattttcca cggcgactcc gacaagctgc gaaccgtgtg cgaagccgtc
      121 gccgcccgcg aaggcgcgat agtgtcggta caggggttcg cccgcggcga aagcaatatg
      181 ctgctggaac ggctctatat tgaacgttcg ctgagcgtaa acactgccgc cgctggcggt
      241 aatgccagcc tgatgacaat tggctaatac tgtggttaat taaggctccg tcaatggagc
      301 ctttttactc gcgtcagagg accgtatgaa acgaattttc cttacctgcg cggcgttgtt
      361 gttcagcagt caggcgttgg ccgatgagtg tgccagcgcc agtacgcagc tggaaatgaa
      421 tcgctgcgcc gccgcgcaat accaggcggc agataaaaag ctgaacgaaa cctatcaaag
      481 cgcgattaag cgtgcgcaac cgccgcagcg tgagctattg caaaaagcgc aggtggcatg
      541 gattgccctg cgcgacgccg attgcgcgct gattcgctca ggtacggagg gcggcagcgt
      601 tcaacccatg atcgccagcc agtgcctgac cgataaaacg aacgaacgcg aagcgttttt
      661 agcctcgctg ctgcaatgtg aagagggtga tttgagctgc ccactgccgc cagccggtta
      721 acgcacgcga atcccttcaa taataatgcg ctgaacgctt tcgaccgttt ggttgaaaaa
      781 ggcttcatcg cgaagcgtcg cgccggttac cgcttcaacc tgaggggcga aatcggcgta
      841 atgttgcgtg gcggcccaaa tcatgaagat caaatgatgc ggagaaacgg gcgcgagttt
      901 cccgctgtgc acccatccgg caatcagcgc ggatttttca tctatcaacg cttttagatc
      961 gccggtcagt tcatccatta agagcggcgc gcccgccagc atctccatgc agaagagccg
     1021 cgacgcctgc ggataatcac gcgaaacctc cagcttgaga cggatatact ctttgatggc
     1081 ctccagaggg gaaaattctg cgcgaaacgc cttgagcggc gccaaccaga catccagaat
     1141 ctgtcgcatt accgcgacat acagcgcctc tttcgaggga taataataaa gcagattggt
     1201 tttggagacg cctgcccgct cggcgacctg ttcaagacgc gcgccatgaa tgccatactg
     1261 ggaaaaaacg gcaagcgcgg cggttaagat aagctgccgt tttgcaccgg tggcctgcga
     1321 acgtttcccg atttttttct ctgtgcgttg cgacatgcgc cctctccttt tcgtcaggac
     1381 gcaagcatac caaatccggc ttataaacaa aaaaaccgcc ggaaatccgg cggcggtggc
     1441 gcatgacgct ttttagcgcg aaacgctcag cgtcttgctg ttgtgacgca ggctagcgat
     1501 tacggttact gcttttgccc ccttttttgc ctgcttcgga tgcacgctgc gggtcattct
     1561 taaaattgcc cccgctgtgc tgaccacttt tacgacctgc ttctgatgct ctttcgcggt
     1621 cttccgcaaa attaccggaa ccgccacgat ggtttgccat tactgacctc cgtcatagat
     1681 tagacatcat attgcatagg taatgaggag tatctcctcg cgccgcgtat gaacgatatc
     1741 atcagtaacg ccgcgtaaaa ttaagcatag tgaaaaacgc cgtggtaggc cgcttaccga
     1801 aatattctgc aacatcagaa gccgaatatg cagaataata accatgagaa ataaataagt
     1861 tattcttata cttggaaaaa tcaaagcgct taaaaatgta tcattttgca acaaaggtcg
     1921 ccaaattaat tattgttata aatcaaagaa atggcgctga aatttgcact cttcacagga
     1981 gggcatatct ttaaatagac gtagcgaatc gctacacacc tgattaatct gaggagtagt
     2041 acaaatggca aagattctgg tgctctatta ttccatgtac ggacacattg aaaccatggc
     2101 gcacgcggtg gcggaagggg caaagaaagt cgacggcgca gaggtcatta taaagcgtgt
     2161 gccagaaaca atgccgcctg aaatcttcgc aaaagctggc ggtaaaacgc aaaacgcacc
     2221 ggttgccacc ccacaggagc tggcggatta cgatgccatt atttttggta cgccaacccg
     2281 gtttggcaat atgtcaggcc agatgcgtac cttcctggac caaaccggcg gactgtgggc
     2341 atccggcgcg ctatacggca agctcggcgg cgtgttcagt tctaccggaa cgggcggcgg
     2401 ccaggagcag accatcacct cgacctggac tacgcttgcc catcatggga tggtgattgt
     2461 cccgataggc tattccgcac aggaactgtt tgacgtctcc caggttcgcg gcggtacgcc
     2521 ttacggcgca acgactatcg ctggaggcga cggttcacgt caaccaagcc aggaggaact
     2581 ctctatcgct cgctatcagg gggaatacgt cgccggtctg gcagtcaaac tcaacggcta
     2641 atcttcaaca ggaggattcg aatgccaact caagaagcaa aagcgcaccg cgtcggcgaa
     2701 tgggcaagcc tgcgtaatac gtcgccggaa attgccgaag ccatttttga agtcgctcac
     2761 tatgacgaga aactggcaga aaaaatatgg gaagaaggta gcgatgaggt gctgatcaaa
     2821 gcctttgaga aaacggacaa agactcgctc ttctggggcg aacaagtcat cgaacgtaag
     2881 aacgtataac acaaacgccc ccgcctgcgc gggggcatac ggctattttg cagcagtgtt
     2941 catgacgtta tcgaacttat ccagcggaca gaagccgttc gcatccaccg gacatccttt
     3001 cagttccagc gttacccttt gcgcaggcga tttgagcgtt aacgcttccg cattacgtaa
     3061 ctgccgggcg ctctggtaga catactcgat tttcatcaaa tcccggttag cgttaccgtc
     3121 atgccagcgt tggaagacaa gctgaccacc aatcggcgtt ctctcatact ggtcatggag
     3181 ctgatagggt ttaaaatcca gcgccgtcag cagcgacgcg atattggaat catgccccac
     3241 cagcacggta accttcggcg cgctaacgcg ctcggcaacc agcaccttat cgatatattt
     3301 taccagcggc gcagcgacat tgcgcgccac cgtgggtgag gtaaacaggc tgtcctggta
     3361 gccgtttttc agttttgaca gcaccttcca ctgccgatcg gtgtggatcc cgccccaagc
     3421 gacctgatcc atcggaaagc cttcgtaata ttgcagggta aacgcatcca ccagcgagtt
     3481 ccctactttc agcggcccct gcacgccagg ctcttgctga tagttcgcgc tgaaggtatc
     3541 tttcgcgtcg attagcgaac actgatgctt ctctttgcag gacggcgagt cctgataatg
     3601 cgttatctgc tcaagcagtt tataactctc atcaagatgt agctgactac gcgccttttc
     3661 catcgcctgt acggcctgtt gccggaacgc ggcggaatca tcggtaatca ccggattgaa
     3721 ggtagggtcc atagtgccca ttttttcctg atgatgaaca ggaatatcac agccggggaa
     3781 agcgctggta atgaaaaatt gcgcggtggc gacggtgcgc tgcaaactat tcgcataggc
     3841 atataccgtg tcgggcgccg gacattctcc cgacggtatc agcccctgcg cgaccagcca
     3901 ttcacgtgtg tagtgtccca tatagacttc cagcacgccg cctttcgtcg tcagttgccc
     3961 gccgggaacg tcccacgccg gccaggcgtt cggcgtcgac tgcgccagta cgttgccatt
     4021 attcgccagc ggcgcccgca gattatggcg gctcatcatc agcacctgtt gtaattgata
     4081 accttccggc gttgtctgcg cctgtacggc ggatgacaac aaaacagccc ctgccacagc
     4141 aacagcgagt aatgattttt tcatccctat gacctcttgt tgttatcaaa tcgttctgag
     4201 tgtgacagaa atggatcatt tttccgggaa cgatttcgca aaacggaggt ttttcttaca
     4261 gtaaacgcgt tagcgccggg aaaccccggc gcatattcag aacgtttttg cccaccacag
     4321 ccgaagcttc atgccccaat agctggtcca gccgctggtg gtgaacacaa cccgaccttg
     4381 tgaaaccacc accagcgttg gcgtcacgct gatttcccag ccagcggata aggcgccgtt
     4441 agcatcattg acgaccggga agtcaacgcc cttgcgcgcc agccagcggg caacctcagc
     4501 atcaccgccg gagcggagcg caacggtcat gacgttttcc ccttccgccg ccaggtgagc
     4561 gaccgcaggc gtggtaaagc ggcatacccc gcaccagctg gcccaaaaat agagcagtac
     4621 ggggcgttc
//
LOCUS       DAGWFR010000248         4594 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.251, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000248 DAGWFR010000000
VERSION     DAGWFR010000248.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4594)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4594)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4594
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.251"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..778)
                     /gene="pspF"
                     /locus_tag="MOX77_004348"
     CDS             complement(<1..778)
                     /gene="pspF"
                     /locus_tag="MOX77_004348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage shock protein operon transcriptional
                     activator"
                     /protein_id="HCA3359733.1"
                     /translation="MAEFKDNLLGEANCFLEVLEQVSRLAPLDKPVLIIGERGTGKEL
                     IANRLHYLSSRWQGPLISLNCAALNENLLDSELFGHEAGAFTGAQKRHPGRFERADGG
                     TLFLDELATAPMLVQEKLLRVIEYGELERVGGSQPLQVNVRLVCATNADLPAMVKEGT
                     FRADLLDRLAFDVVQLPPLRERQSDIMLMAEHFAIQMCRELRLPLFPGFTDRAKETLL
                     HYAWPGNVRELKNVVERSVYRHGSSEHPLDEIVIDPFQRYP"
     gene            949..1617
                     /gene="pspA"
                     /locus_tag="MOX77_004349"
     CDS             949..1617
                     /gene="pspA"
                     /locus_tag="MOX77_004349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage shock protein PspA"
                     /protein_id="HCA3359734.1"
                     /translation="MGIFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVR
                     SNSARALAEKKQLSRRIEQATAQQTEWQEKAELALRKDKDDLARAALIEKQKLTDLIA
                     TLEQEVTLVDDTLARMKKEIGELENKLSETRARQQALMLRHQAASSSRDVRRQLDSGK
                     LDEAMARFESFERRIDQMEAEAESHRFGKQQSLDQQFANLKADDEISEQLAQLKAKMK
                     QDNQ"
     gene            1677..1901
                     /gene="pspB"
                     /locus_tag="MOX77_004350"
     CDS             1677..1901
                     /gene="pspB"
                     /locus_tag="MOX77_004350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress response membrane protein PspB"
                     /protein_id="HCA3359735.1"
                     /translation="MSALFLAIPLTIFVLFVLPIWLWLHYSNRAGRGELSQSEQQRLL
                     QLTDDAQRMRERIQALEDILDAEHPNWRER"
     gene            1901..2260
                     /gene="pspC"
                     /locus_tag="MOX77_004351"
     CDS             1901..2260
                     /gene="pspC"
                     /locus_tag="MOX77_004351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress response membrane protein PspC"
                     /protein_id="HCA3359736.1"
                     /translation="MSGINLNKKLWRMPQKGMVRGVCAGIADYLDVPVKLVRILVVLS
                     IFFGLAFFTVVAYIVLSFVLDPMPDNLAAGKPQPTSGELLDTVDRELAAGEKRLREME
                     RYVTSDTFTLRSRFRQL"
     gene            2283..2501
                     /gene="pspD"
                     /locus_tag="MOX77_004352"
     CDS             2283..2501
                     /gene="pspD"
                     /locus_tag="MOX77_004352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage shock protein PspD"
                     /protein_id="HCA3359737.1"
                     /translation="MNTRWQRAGQKVKPGFKIAGKLVLLTALRYGPAGVAGWAVKSVA
                     RRPLKMLLAFALEPVLRKAANKISQRYK"
     gene            2577..2891
                     /gene="pspE"
                     /locus_tag="MOX77_004353"
     CDS             2577..2891
                     /gene="pspE"
                     /locus_tag="MOX77_004353"
                     /EC_number="2.8.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate sulfurtransferase PspE"
                     /protein_id="HCA3359738.1"
                     /translation="MLKKGIFALALFVAMPLYAAEYWIDVRIPEQYQREHIQGAINIP
                     LKEIKSHIETVVPDRNDTVKLYCNSGRQSGMAKQMLLDMGYTHAMNMGGISRLDMPKV
                     KK"
     gene            3040..4437
                     /locus_tag="MOX77_004354"
     CDS             3040..4437
                     /locus_tag="MOX77_004354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcjX family protein"
                     /protein_id="HCA3359739.1"
                     /translation="MKRLKTELNALVNRGVDRHLRLAVTGLSRSGKTAFITAMVNQLL
                     NVHAGARLPLLSAVREERLLGVKRVPQRDFGIPRFTYDEGILQLYGNPPAWPTPTRGV
                     SEIRLALRYRSNDSLLRHFKDTSTLYLEIVDYPGEWLLDLPMLAQDYLSWSRQMNGLL
                     QGQRAEWAAKWRQLCDGLDPLAPADENRLAEIAAAWTDYLHQCKSQGLHFIQPGRFVL
                     PGDMAGAPALQFFPWPDVDAFGESKLAQADKQTNAGMLRERFNYYCEKVVKGFYKNHF
                     LRFDRQIVLVDCLQPLNSGPQAFNDMRLALTQLMQSFHYGQRTLFRRLFSPVIDKLLF
                     AATKADHVTLDQHANMVALLQQLIQDAWQNAAFEGISMDCLGLASVQATTSGVIEVNG
                     EKIPALRGNRLSDGAPLTVYPGEVPSRLPGQAFWDKQGFQFEAFRPQVMDVDKPLPHI
                     RLDAALEFLIGDKLR"
     gene            4434..>4594
                     /locus_tag="MOX77_004355"
     CDS             4434..>4594
                     /locus_tag="MOX77_004355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01620 family protein"
                     /protein_id="HCA3359740.1"
                     /translation="MSEPLKPRIDFAEPLKEEPTSAFKAQQTFSEAESHTFAPAAIDE
                     RPEDEGVAEA"
BASE COUNT         1133 a         1109 c         1265 g         1087 t
ORIGIN      
        1 cgggatagcg ttgaaaagga tcgataacaa tttcatccaa aggatgttcg ctgctgccgt
       61 ggcgatacac tgaacgttcg actacgtttt tcagctcgcg gacattaccc ggccaggcgt
      121 aatgcaacaa cgtttctttt gcccgatcgg taaaaccagg aaataagggc agacgtagct
      181 cacgacacat ctgaatagca aaatgctcgg ccatcagcat gatatcgctc tggcgttcgc
      241 gcagcggcgg cagttgtaca acgtcaaaag ccagcctgtc gagcagatcg gcacgaaatg
      301 tcccttcctt caccatggcg ggtaaatcgg cattagtggc gcatactaat cgcacattaa
      361 cctgtaacgg ttggctgccg ccgacgcgct ctagctcgcc atattcaatc acccgcagta
      421 gcttttcctg taccagcatt ggcgctgtcg ccagttcatc caaaaacagc gtgccgccat
      481 cggcgcgttc aaaacgaccg ggatggcgtt tttgcgcccc ggtaaaagcg cccgcttcat
      541 ggccaaacag ttcggagtcc agcagatttt cgttaagcgc cgcgcagtta agcgagataa
      601 gcggcccctg ccagcgtgaa gagagatagt gcaggcgatt ggcgataagt tctttacccg
      661 taccgcgttc gccaataatc agcactggct tatccagcgg cgcgagccgg gagacttgtt
      721 ccagtacttc aagaaaacag tttgcctcgc cgagcaggtt atctttaaat tcagccatga
      781 tgaaaatcgc cacttgttag tgtttttcac cactttatcc tttttggctg gcgaggtaaa
      841 acgaaataat tccttaacta tcaataatat aaaaagttgg cacgcaaatt gtattaatca
      901 tgtagcaggg catcgcccgt tatcagaaca ttatgtgagg attgaattat gggtattttt
      961 tctcgttttg ccgacatcgt gaacgccaat atcaatgcgt tgttggaaaa agcggaagat
     1021 ccgcagaagc tggtgcgcct gatgattcag gagatggaag atacgctagt ggaggttcgc
     1081 tcgaactccg cgcgagcttt agcggaaaag aaacagttat cccgtcgtat tgaacaggct
     1141 acggctcagc agaccgagtg gcaggaaaaa gcggaactgg ctctgcgcaa agataaagac
     1201 gatctggcgc gcgccgcatt gattgaaaaa caaaagctga ccgatttaat tgctacgctt
     1261 gaacaggaag tcacgctggt ggatgacacg ctggcgcgca tgaagaaaga gattggcgag
     1321 ctggaaaaca aactcagcga aacacgcgct cgccagcagg cgctgatgct gcgtcatcag
     1381 gcggcaagtt cttcccgcga tgtccgtcgt cagcttgaca gcggcaaact ggatgaagcc
     1441 atggcgcggt ttgaatcctt tgaacgtcgt atcgatcaaa tggaagcgga agcggaaagc
     1501 catcgttttg gtaagcagca atcgctggac caacagtttg ccaacctgaa agccgatgat
     1561 gaaatcagcg agcagctggc gcagttgaaa gccaaaatga agcaagataa tcaataatga
     1621 caatggcggc gccggtacgc gccgtcgctc atcagcttta ggtgtaagga gaacgcatga
     1681 gcgcgctatt tctggccatc ccgttaacca tttttgtgtt gtttgtgtta ccgatttggc
     1741 tgtggctgca ttacagcaac cgcgccggtc ggggagaact gtcgcaaagc gagcagcaac
     1801 gcttactgca actcacagac gacgcgcaac gtatgcgcga gcgcattcag gcgctggaag
     1861 atattcttga tgcagagcat ccgaactgga gagagcgcta atgagtggaa tcaatctgaa
     1921 taaaaaacta tggcgtatgc cgcaaaaggg catggtgcgt ggcgtttgcg ccgggatcgc
     1981 cgactacctt gatgtaccgg taaaactggt gcgtattctg gtcgtgctgt cgattttctt
     2041 tgggctggcg ttttttaccg tagtggccta tatcgtcctg tcttttgtac tggaccctat
     2101 gccggataat ctggccgcag ggaaaccgca gccgaccagc ggcgaactgc tggataccgt
     2161 agacagagag cttgccgcag gcgaaaagcg tttgcgagaa atggaacgct acgtcacgtc
     2221 agatacgttc acactgcgta gtcgtttccg tcaactgtaa ctgatatatc gggaaggtga
     2281 agatgaatac tcgctggcaa cgcgccgggc agaaggtgaa gcccggcttc aaaatagcag
     2341 gtaagctggt tctgttgacc gcgttacgct acgggcctgc cggcgtggcg ggatgggcgg
     2401 taaaatccgt cgcccgtcgt ccgctaaaaa tgttgctggc gtttgcgctg gagccagtac
     2461 ttcgtaaggc ggcgaataaa atttcgcagc gttacaaata gcgagtctgg tcataatatt
     2521 tcgttaagct ctggcgtata gtgtgtgcga aatacattac gtgtcaggac gggagtatgt
     2581 tgaaaaaagg aatatttgcg ttagcgttat tcgtagccat gccgctttat gccgcagaat
     2641 actggataga tgtccgcatt ccggaacaat atcaacgaga gcatattcag ggcgcgatta
     2701 atatcccatt gaaggagatt aaatctcata tcgaaacggt agttccagac aggaacgata
     2761 cggtaaagtt atattgcaac tccgggcgac agtcgggcat ggcaaaacaa atgttgcttg
     2821 atatggggta tacgcacgcg atgaatatgg gcggcatcag tcgtcttgat atgccgaaag
     2881 taaaaaaata gataatctat tgctcaatac tcatactaac cgcggcgctt aatgcgccgt
     2941 tgttgatctc tccgggtagt tgataataac gtttttgcac atatctataa cgcaggctcg
     3001 ttattatttt ttcttctctt caggctcaac aggatgtcaa tgaagcgact taaaactgaa
     3061 ctcaacgcgc tggtcaatcg tggggtagac aggcatttgc gtcttgccgt aaccgggttg
     3121 agccgcagcg gtaaaacagc gtttatcacg gcgatggtta accagttgct taatgtccac
     3181 gcgggcgcgc gcttaccgtt gctcagcgcg gtacgcgaag aacgcctgct tggcgtaaag
     3241 cgcgtgcctc aacgtgattt tggtattccc cgttttacct acgacgaggg gatacttcag
     3301 ctttatggca atcctcccgc ctggcccaca ccgacgcgcg gcgtcagtga gattcggctg
     3361 gcgttgcgct atcgctcaaa cgactcgctg ctgcgccatt ttaaagatac ctcgacattg
     3421 tatctggaga ttgtggacta tccaggggaa tggttactcg atctgcccat gctggctcag
     3481 gattatttaa gctggtcccg tcagatgaac ggcttgttac aagggcaacg cgctgagtgg
     3541 gccgcaaaat ggcggcaact ttgcgacggg ctcgatccgc tggcgcccgc cgatgaaaat
     3601 cggctggcgg agattgccgc cgcctggacg gattatttgc atcagtgtaa atcgcaggga
     3661 ttgcatttta ttcagcctgg acggtttgtt ttgccgggcg atatggcggg cgcgccagcg
     3721 ttgcagtttt tcccgtggcc ggatgtggac gccttcggcg agtcaaaact ggcgcaggcg
     3781 gataaacaga ccaacgctgg aatgctgcgc gaacgcttta actactattg cgaaaaggtg
     3841 gtcaaagggt tctacaaaaa tcattttcta cgctttgatc gccagattgt gctggtcgac
     3901 tgtctgcaac cgcttaatag cgggccgcag gcgtttaatg atatgcgtct cgctttaacg
     3961 cagctgatgc aaagttttca ctatggtcag cgaactctgt ttcgccgctt gttttcgccg
     4021 gtgattgata aattgctgtt cgccgcgacg aaagccgacc atgtcaccct cgaccaacat
     4081 gccaatatgg tggccttgct ccagcagctt attcaggatg cctggcaaaa tgccgcgttt
     4141 gaaggcatta gtatggattg cctggggctg gcgtcggtac aggcgaccac cagcggcgtg
     4201 attgaggtca acggtgaaaa aatcccggct ttacgtggaa accgtttgag tgacggcgcg
     4261 ccgttaaccg tgtaccccgg cgaagtgcct tcgcgtttgc cgggacaagc gttttgggat
     4321 aagcagggct ttcagttcga agcctttcgt ccgcaggtaa tggatgttga taaaccatta
     4381 ccacacattc gtctggacgc tgcgctggag tttttaatag gagataagct gcgatgagcg
     4441 aaccgttaaa accgcgtatt gattttgcag aaccgctaaa ggaggaacct acatcggcct
     4501 tcaaagcgca gcaaactttc agcgaagcgg agtcgcatac atttgcgcct gcggctatcg
     4561 atgagcgccc ggaagacgaa ggcgtggcag aagc
//
LOCUS       DAGWFR010000249         4557 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.252, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000249 DAGWFR010000000
VERSION     DAGWFR010000249.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4557)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4557)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4557
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.252"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..405)
                     /locus_tag="MOX77_004356"
     CDS             complement(<1..405)
                     /locus_tag="MOX77_004356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460786.1"
                     /note="catalyzes the phosphorylation of incoming sugar
                     substrates concomitant with their translocation across the
                     cell membrane; subunit IIA transfers a phosphoryl group to
                     subunit IIB; subunit IIB transfers the phosphoryl group to
                     the substrate; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose transporter subunit IIAB"
                     /protein_id="HCA3359741.1"
                     /translation="MTIAIVIGTHGWAAEQLLKTAEMLLGEQENVGWIDFVPGENAET
                     LIEKYNAQLAKLDTSKGVLFLVDTWGGSPFNAASRIVVDKERYEVIAGVNIPMLVETF
                     MARDDDPSFDELVALAVETGREGVKALKAKPVE"
     gene            878..2437
                     /gene="yoaE"
                     /locus_tag="MOX77_004357"
     CDS             878..2437
                     /gene="yoaE"
                     /locus_tag="MOX77_004357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460784.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CNNM family cation transport protein YoaE"
                     /protein_id="HCA3359742.1"
                     /translation="MELLMDPSIWVGLLTLVVLEIVLGIDNLVFIAILADKLPPKQRD
                     KARLIGLSLALIMRLALLSIISWLVTLTKSLFTVWDFTFSGRDLIMLLGGIFLLFKAT
                     TELHERLENREHDTGHGKGYASFWVVVTQIVILDAVFSLDAVITAVGMVNHLPVMMAA
                     VVIAMAVMLLASKPLTRFVNQHPTVVVLCLSFLLMIGLSLVAEGFGFHIPKGYLYAAI
                     GFSIVIEVFNQIARRNFIRHQSTLPLRARTADAILRLMGGKRQASMQHETDSPAAISV
                     SEGAFAEEERYMINGVLTLASRSLRGIMTPRGEISWVDANLSVAEIRQQLLSSPHSLF
                     PVCRGELDEIIGIVRAKELLVALEEGADVAAIAASSPAIVVPETLDPINLLGVLRRAR
                     GSFVIVTNEFGVVQGLVTPLDVLEAIAGEFPDADETPEIVADAEGWIVKGGTDLHALQ
                     QALEVDHLVNEEGDIATVAGLVIAANGHIPRVGDVIDVPPLRITIVEANDYRVDLVRI
                     VKEQPAHDEEE"
     gene            complement(2459..4060)
                     /locus_tag="MOX77_004358"
     CDS             complement(2459..4060)
                     /locus_tag="MOX77_004358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001192512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HCA3359743.1"
                     /translation="MQTAQRIINHYRRNRFIVCTICALVTLILTLNIRFISERNLNHH
                     RTVAFANHAVDALDNVLHPLLVGRNILLPLLELPCATAHLPLRKQAARLQTIRSIGLV
                     KEGILYCSSIFGARNTPIRQLQPDLPAAGDLLLLSTDQSLLKGSPILIQWYPASADGQ
                     DGVMEIVNIDLLATMLLEPQQPQITSASLTVGKRHLLYGRGVVDTLPELKKDEERYQL
                     SSRHFPFTISVSGPSAGVLAFKHLPTQLPLAVLLSLLIGYIAWLATASRMSFSWEINL
                     ALAEREFELFCQPLLNARTQQCTGVEILLRWNNPRQGWISPDVFIPITEEHNLIAPLT
                     RYVIAETIRQRHYFPINHQFHIGINVAASHFRHGVLLKDLNQYWFSAEPVQQLVLELT
                     ERDALLDVDYRLMRELHRKGVKLAIDDFGTGNSSLSWLEKLRPDILKIDKFFTAVIGT
                     DAVNSTVTDIIIALGQRLNIELVAEGVENQTQAQHLRQHGVQMLQGYLYAKPMPISEF
                     PQWLAGSAPPPARHNGQIMSAMPHL"
     gene            complement(4198..>4557)
                     /locus_tag="MOX77_004359"
     CDS             complement(4198..>4557)
                     /locus_tag="MOX77_004359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase, iron-sulfur-dependent,
                     subunit alpha"
                     /protein_id="HCA3359744.1"
                     /translation="EVGCQGEVGVACSMAAAGLAELLGASPEQVCVAAEIGMEHNLGL
                     TCDPVAGQVQVPCIERNAIASVKAINAARMAMRRTSAPRVSLDKVIETMYETGKDMNA
                     KYRETSRGGLAIKVQCD"
BASE COUNT         1018 a         1161 c         1257 g         1121 t
ORIGIN      
        1 ttctaccggt ttcgctttca gcgcttttac gccttcacga ccggtttcta ccgccagtgc
       61 gaccagctcg tcaaagctcg gatcgtcgtc acgagccata aacgtttcga ccagcatcgg
      121 gatgttgacg ccggcaataa cttcatagcg ctctttatcg acgacaatgc ggctggcagc
      181 attaaacgga ctgcctcccc atgtatcaac gagaaatagc acgcctttac tggtatcgag
      241 tttagccaac tgagcgttgt acttttcgat cagcgtttcg gcattttcgc ctggaacgaa
      301 atcgatccag ccgacgtttt cctgctcgcc taacagcatt tcggctgttt taagtaactg
      361 ctctgcagcc caaccatgtg tgcctataac aatagcaatg gtcacttgct acctccttta
      421 ttattgtcaa cacatcaact tgacagatgt attttttgaa tcgccgtccg caagcgaatc
      481 gattcagatg agggttacaa cgaaaaacgc atgattttcg tgaattattt tagatatcga
      541 aaaaaatatt ttgtgtgatg gagatctgta attttgtttt cgataatgag aaatttcgaa
      601 gtgtaaaata tcctggttac atctctttgc aaaggaaggt aaatctttgc caaaaaccag
      661 ttgtctctgt tatgtttagc ttccgtttaa ttagaatggg gtatagggca gcagcccgtt
      721 gtatggatcg tcaccgacgt catttcactc tttggccgtt ttgcgcctgt caatctggca
      781 tatcttgcca tagccttact ttgtttattg cgttaccgcc tgcatccttt gagatgttgt
      841 gggcgccgtt tagtcattcc ttaagcagga gcttgtcatg gaattattaa tggatccctc
      901 aatttgggtg ggtttactca cgctcgtcgt cctggaaatt gtcctaggta tcgataacct
      961 ggtctttatc gcgatcctcg ccgataaatt gccgccaaag cagcgtgaca aagcgcgtct
     1021 tatcgggctc tcgctggcgc tgattatgcg tctggcgctg ctgtccatta tttcgtggct
     1081 ggtgacctta acaaagtcgc tctttactgt ctgggatttt accttctccg gccgcgattt
     1141 aattatgctg ctgggcggta tattcctgct gtttaaagcg accaccgagc tgcatgaacg
     1201 tctggaaaac cgcgagcatg acaccggaca cggtaaaggc tatgcgagct tctgggtggt
     1261 agtcacgcag attgtcatcc tggatgcggt cttctcgctg gacgccgtga ttacggcggt
     1321 aggtatggta aaccatctgc cggttatgat ggcggcggtg gtgattgcga tggcggtgat
     1381 gctactggcg tcaaaaccgc tgacccgttt tgtcaaccag catccgacgg tggtggtgct
     1441 ctgtctgagt ttcctgctga tgatcggctt gagcctggtg gcggaaggat ttggtttcca
     1501 tattccgaaa ggctacctgt acgcggcaat tggtttctcg atcgttatcg aggtgtttaa
     1561 ccagattgcg cgccgcaact ttattcgtca tcagtccacg ttgccgctgc gcgcgcgtac
     1621 tgcggacgct atcctgcgtc tgatgggcgg taaacgtcag gcgagtatgc aacatgagac
     1681 ggatagcccg gccgcgatat cggtgtcgga aggcgccttc gccgaagaag aacgctacat
     1741 gattaacggc gtactgactc tggcgtcgcg ctccctgcgc ggcattatga cgccgcgagg
     1801 cgaaattagt tgggtggatg cgaatctcag cgtagctgaa atccgtcagc agttactctc
     1861 ttctccgcat agcctgttcc cggtatgtcg gggcgagctg gatgaaatta tcggtatcgt
     1921 tcgggcgaaa gagttgctgg tggcgctgga agagggcgcg gacgttgcgg ctatcgccgc
     1981 ctcttccccg gcgatagtgg tgccggaaac gcttgatcct atcaatctgt taggcgtttt
     2041 gcgtcgcgcg cgcggcagtt tcgttatcgt cactaacgag ttcggcgtgg tgcaggggct
     2101 ggttacgccg ctggatgtgc tggaagcgat tgccggtgag ttcccggatg ccgatgaaac
     2161 gccggaaatc gttgccgatg ccgagggctg gatagtgaag ggcggcaccg atcttcatgc
     2221 gttacagcag gcgctggaag ttgaccatct ggtgaacgaa gagggtgata ttgcgacggt
     2281 cgcggggtta gtgatcgccg ctaatggcca tattcctcgt gtaggcgatg tcattgatgt
     2341 tccgcccctg cggatcacca ttgtcgaggc caacgactac cgtgtcgatc tggttcgaat
     2401 tgttaaagaa cagcctgccc acgacgaaga ggaataacgt cacacgcagg aatcaagtct
     2461 atagatgcgg catcgcggac ataatctgtc cgttatgccg ggcgggcggc ggcgcgctgc
     2521 ccgccagcca ctgtggaaat tcgctaatgg gcatcggctt cgcatagaga tagccctgta
     2581 acatttgcac gccatgctgg cgcaaatgct gtgcctgcgt ctggttttcg accccttccg
     2641 caaccagttc aatattcagt ctttgcccca gcgcgataat aatatcggtc accgttgaat
     2701 tgaccgcatc ggtaccgatg acggcggtga agaatttatc gattttcaaa atatccggac
     2761 gcagtttttc cagccaggag agcgagctgt ttcctgtgcc aaaatcatcg atggctaact
     2821 tcacgccttt acgatgcagc tcgcgcatca ggcggtaatc aacgtcaagc aacgcgtcgc
     2881 gttccgtgag ctccagcacc agttgctgaa caggttccgc actaaaccag tactgattaa
     2941 gatccttgag aagcacgccg tgtcggaaat ggcttgccgc cacattgatg ccgatatgaa
     3001 actgatggtt gatggggaag tagtgccgct gccgaatggt ttccgcaatc acatagcggg
     3061 tcagcggcgc tatcaggtta tgctcctcgg tgataggaat aaaaacatcc ggtgagatcc
     3121 agccctggcg cgggttattc cagcgtaaca ggatctcaac gccggtacac tgctgcgtgc
     3181 gggcattaag caacggctga caaaatagct caaactcccg ttcggcaagg gccagattaa
     3241 tttcccagga aaagctcatt ctgctggcgg ttgccagcca ggcgatataa ccgatcaaca
     3301 ggctaagcaa tacggccagc ggtaactgcg tcgggagatg tttgaacgcc agtacgcctg
     3361 ccgacggccc gctgacgctg atagtaaaag ggaaatgccg cgatgaaagc tggtaacgct
     3421 cttcatcttt ttttaattcc ggaagagtat cgaccacgcc ccgaccatat aacaggtgcc
     3481 gtttgccgac cgtcaggctg gcgctggtaa tttgcggctg ctgcggctca agtagcatag
     3541 tcgccagcaa gtcaatattc acaatttcca tcacgccatc ctgtccatcg gcagaggcgg
     3601 gataccactg aatgaggatc gggcttccct tgagtaacga ttggtccgtg gaaagtagca
     3661 gcagatcgcc agctgcggga agatcgggct gaagctggcg tatgggagta ttacgggcgc
     3721 caaaaatgct tgagcagtag agaattccct cttttaccag cccgatagaa cgaatggttt
     3781 gcaggcgggc ggcttgctta cgcaacggca gatgcgcggt cgcgcacgga agctcaagta
     3841 agggtagcag tatgtttcgt ccgaccagga gaggatgcag cacattatcc agcgcatcaa
     3901 cggcatgatt cgcgaatgca accgtgcgat ggtgatttaa gttccgctcc gaaataaatc
     3961 ggatgttcag cgtaagaatg agcgtgacca gtgcacaaat cgtgcaaaca atgaaacgat
     4021 tacggcgata atgattgatg atccgttgtg ctgtttgcat gcgggccgcc caataagcgt
     4081 tggcgacaaa agccaaccgc gacacagcaa gtgtagtggg gaaacgtgga gtcgacgagg
     4141 aagagataaa aatttcgccc atccgtagca gatgggcgaa gggaggggaa atggcgttta
     4201 atcacactgg actttaatag ccaacccgcc gcgcgacgtt tcgcggtatt tggcgttcat
     4261 gtcttttccg gtctcgtaca tcgtttcgat gactttatcc agcgagacgc gcggcgcgct
     4321 ggttcgacgc atggccatac gcgcagcgtt gatcgcttta accgaagcaa tggcgttacg
     4381 ctcgatacac ggcacctgca cctgaccggc aaccgggtcg caggtcagcc ccaggttatg
     4441 ctccatgccg atttcagcgg caacgcaaac ctgttccggg ctggcgccca acagttcagc
     4501 aaggcctgcc gccgccatcg aacaggcgac cccgacttcg ccctgacagc cgacttc
//
LOCUS       DAGWFR010000250         4469 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.253, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000250 DAGWFR010000000
VERSION     DAGWFR010000250.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4469)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4469)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4469
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.253"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(50..1327)
                     /locus_tag="MOX77_004360"
     CDS             complement(50..1327)
                     /locus_tag="MOX77_004360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1963 domain-containing protein"
                     /protein_id="HCA3359745.1"
                     /translation="MDERIPCKNPQCSHFILPATAARTEGYCMPCVQARYRQEQEEYI
                     RKNRKTIDAFSGITNPVEMLKLVHEPREHDPLIEWIPCPIPTDELYKKLSDDESRDMV
                     DYAEELFDSGWQEEAQEIALCLAAFTQANLDNFLRQVINEEELELSSPLPFHRAPPDV
                     RDALLQKVETDDENRDGILCALAWIGDEVVVEHFNRWRQEPPAWSASLHILPHRYAHQ
                     AGWELTENGRRRDLYFTQCTHLVKQAPEQPAVFRAVAEYGENCPHCSLPLINLFEVAP
                     SAVGLSTQGWPGQIRILTCQCCTAYNTVFATVDPQGQPRWYEKNALSTLAVENSSDWI
                     TLPLDVLHPGESRLPLFAAEIFLPTTFSQLGGHPAWVQDTDYPTCPTCAQTMMFLAQL
                     SYEDIEEEEYAEGMLYGFICPSCQTTATSYQQT"
     gene            complement(1456..1785)
                     /locus_tag="MOX77_004361"
     CDS             complement(1456..1785)
                     /locus_tag="MOX77_004361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3359746.1"
                     /translation="MQTNTRKVVTSDAKWHPHLGISFIGCLLAITLEIYFEERIFIPH
                     SGGVSFGLIVLLVINMVTIPVVMALIALLCFIIHIPRKSVNCILLCLLACILTIAGLF
                     IAYPVGR"
     gene            complement(1806..2705)
                     /gene="hemF"
                     /locus_tag="MOX77_004362"
     CDS             complement(1806..2705)
                     /gene="hemF"
                     /locus_tag="MOX77_004362"
                     /EC_number="1.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-dependent coproporphyrinogen oxidase"
                     /protein_id="HCA3359747.1"
                     /translation="MKPDAHHVKQFLLRLQDDICQTLSAVDGANFIEDSWRREAGGGG
                     RSRVLRNGGIFEQAGVNFSHVHGDAMPASATAHRPELAGRSFEAMGVSLVVHPHNPYI
                     PTSHANVRFFIAEKPGADPVWWFGGGFDLTPYYGFEEDAVHWHRTARDLCQPFGDDVY
                     PRYKKWCDDYFFLKHRNEQRGIGGLFFDDLNTPDFDHCFAFMQAVGNGYTEAYLPIVE
                     RRKAMVWGERERNFQLYRRGRYVEFNLVWDRGTLFGLQTGGRTESILMSMPPLVRWEY
                     DWQPEAGSPEAALSEFIQVRDWI"
     gene            complement(2708..3577)
                     /gene="amiA"
                     /locus_tag="MOX77_004363"
     CDS             complement(2708..3577)
                     /gene="amiA"
                     /locus_tag="MOX77_004363"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase AmiA"
                     /protein_id="HCA3359748.1"
                     /translation="MSTFKLLKTLTSRRQVLKTGLAALTLSGMSHAIAKEETLKTSNG
                     HSKPKTKKTGSKRLVMLDPGHGGIDTGAIGRNGSQEKHVVLAIAKNVRAILRNHGIDA
                     RLTRTGDTFIPLYDRVEIAHKHGADLFMSIHADGFTNPKAAGASVFALSNRGASSAMA
                     KYLSERENRADEVAGKKATDRDHLLQQVLFDLVQTDTIKNSLTLGSHILKKIKPIHKL
                     HSRTTEQAAFVVLKSPSIPSVLVETSFITNPEEERLLGTTAFRQKIATAIANGIISYF
                     HWFDNQKAHTKKR"
     gene            3790..4215
                     /locus_tag="MOX77_004364"
     CDS             3790..4215
                     /locus_tag="MOX77_004364"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311332.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family acetyltransferase"
                     /protein_id="HCA3359749.1"
                     /translation="MEIRVFRQEDFEEVITLWERCDLLRPWNDPEMDIERKVNHDVSL
                     FLVAEVSGEVVGTVMGGYDGHRGSAYYLGVHPEFRGRGIANALLNRLEKKLIARGCPK
                     IQIMVRDDNDVVLGMYERLGYEHSDALSLGKRLIEDEEY"
     gene            4202..>4469
                     /locus_tag="MOX77_004365"
     CDS             4202..>4469
                     /locus_tag="MOX77_004365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2919 domain-containing protein"
                     /protein_id="HCA3359750.1"
                     /translation="MKSTEFHPADYDVHGCLRLPFLFWCVLLLQARAWVLFVIAGSSR
                     GQGNTLLNFFYPDHDNFWLGLLPGVPAVVAFLLSGRREAVPGVWR"
BASE COUNT         1025 a         1112 c         1186 g         1146 t
ORIGIN      
        1 gcgcacaacg tgcaaaacag ttttgtcatc agatcatgag gatgagcgtt tatgtttgct
       61 gataagacgt tgccgttgtt tggcaggagg ggcagataaa cccgtaaagc attccttccg
      121 catattcctc ttcctcgata tcttcatagc ttagctgcgc aagaaacatc atcgtttgcg
      181 cgcacgttgg gcacgtggga tagtctgtat cctgaaccca tgcgggatgg ccgccgagct
      241 gtgagaaggt ggtgggtaaa aatatttcag cagcgaatag cggcaaacgg gattccccgg
      301 ggtgcagaac atcaagcggt agcgttatcc agtcagagga attctccacc gccagcgtcg
      361 agagcgcatt tttttcgtac catcgcggct ggccttgtgg atcgacggtg gcgaaaacgg
      421 tgttatatgc cgtacaacac tgacaggtca gaatacgaat ttgaccgggc caaccctgcg
      481 tgcttaggcc gacggcgctc ggcgcaacct caaacagatt gattagcggc agggaacagt
      541 gtgggcagtt ttcaccatat tctgcaacgg cgcgaaaaac ggccggctgt tcaggtgcct
      601 gttttaccag atgggtacat tgcgtaaagt aaagatcgcg cctgcggcca ttttcagtga
      661 gctcccatcc cgcctggtga gcatagcgat gagggaggat atgaagtgaa gcactccacg
      721 caggtggttc ctggcgccag cggttaaaat gctcaacgac aacctcatcg ccaatccagg
      781 ccagggcgca aagaatgcca tcacggtttt cgtcatcggt ttcaaccttc tgcaaaagcg
      841 cgtcgcgtac gtcaggcggc gcacggtgaa aaggtagggg tgaagagagc tccagttcct
      901 cttcatttat tacttggcgc aggaaattat ccagattggc ctgggtaaat gccgccaggc
      961 acagcgcaat ttcctgagct tcctcctgcc atccggaatc aaataattct tctgcataat
     1021 cgaccatgtc gcggctttca tcatcggaga gctttttgta aagctcatcg gtcggaatgg
     1081 ggcagggaat ccactcgatt aacggatcgt gttcccgggg ttcatgaacg agtttaagca
     1141 tttcaacagg gttggtaatg ccactgaacg cgtcgatcgt ttttctgttt ttccggatat
     1201 attcttcctg ctcttgccga tagcgcgcct ggacgcaggg catgcaatag ccctccgtgc
     1261 gggcagccgt tgctggcagg atgaaatgtg agcattgcgg gtttttacaa ggaatacgct
     1321 cgtccatgcg gtagtgctcc actgcaaatt ctacgagtgt ttactgtact gttttactaa
     1381 tgataacggc agcgggcggt tatccgaatt ctttatctac aatgaactcg tttatttcta
     1441 cgagcctgct tttattcaac ggccaaccgg ataggcgata aacaaaccgg ctatcgtcaa
     1501 aatacatgcc agtaggcata gcaagatgca gttaacgctt ttacgcggaa tatgaataat
     1561 aaagcagagt aatgctatca gggccatgac cacagggatg gtcaccatat tgataaccag
     1621 aagcacgatc agaccgaagc tcacccctcc gctatgaggg atgaatattc tttcttcaaa
     1681 atatatttct agcgtaatgg caagcaggca gccaataaaa cttataccca gatggggatg
     1741 ccatttggcg tcactggtta ctactttccg tgtatttgtt tgcattgttt tactttataa
     1801 ataagttaaa tccagtcgcg tacctgaata aactcgctca gcgccgcttc cgggctaccc
     1861 gcttccggct gccagtcgta ctcccagcgc accagcggcg gcatcgacat caggatagat
     1921 tcagtgcgcc cgccggtttg cagaccaaac agggtgcctc tgtcccatac cagattgaac
     1981 tccacgtagc gaccgcggcg ataaagttga aaattacgct cccgctctcc ccagaccatc
     2041 gctttgcgtc gttcgacaat cggtaaatac gcctcggtgt agccgttacc gaccgcctgc
     2101 ataaaagcaa aacagtggtc gaaatccggc gtattcaaat cgtcaaaaaa caggccgccg
     2161 ataccgcgct gctcgttacg atgcttgagg aaaaagtagt catcgcacca ctttttatag
     2221 cgcggataca catcgtcgcc aaacggctgg cacaggtcgc gggcggtgcg gtgccagtga
     2281 acggcatcct cttcaaagcc gtagtagggc gttaaatcga acccgccgcc aaaccaccac
     2341 accggatcgg cgcccggttt ttcggcaata aaaaagcgca cgttagcatg gctggtggga
     2401 atatacggat tgtgcggatg caccaccagc gatacgccca tcgcttcaaa actacgcccg
     2461 gccagttctg gccgatgtgc ggtggcggac gcgggcattg catcgccgtg aacgtgagag
     2521 aaattaacgc ccgcctgttc gaaaattccg ccgttgcgta atacccggct gcgtccgccg
     2581 ccgcccgctt cgcgtcgcca gctatcttcg ataaagtttg cgccatccac agcggataac
     2641 gtttggcaaa tatcatcctg caggcgtagc agaaactgtt ttacgtgatg tgcatcgggt
     2701 ttcatgatta ccgtttcttc gtgtgtgctt tctgattatc aaaccagtga aaataactga
     2761 tgatgccgtt ggcgatcgcc gtagcgattt tctggcgaaa cgccgtcgtg cccagcaggc
     2821 gttcttcttc cggattggta ataaacgagg tttcgaccag taccgacgga attgacggtg
     2881 attttagcac cacgaaagcc gcttgttcgg tagtgcggct gtgtaattta tgtatgggtt
     2941 tgattttctt gagaatatgc gaacccagcg tcagactgtt tttaatcgta tcggtttgca
     3001 ccagatcaaa caaaacttgt tgtaatagat gatcccggtc agtggctttt ttacccgcca
     3061 cttcgtccgc gcggttttca cgctcggaga gatacttcgc catggcgcta ctggccccgc
     3121 ggttggaaag cgcaaaaacg gaagcgcccg ccgctttcgg attggtaaaa ccatcggcat
     3181 gaatagacat aaacagatcc gcgccgtgct tatgggcgat ttccacccga tcgtacagcg
     3241 gaataaaggt atcccctgtc cgggttaaac gcgcatcgat tccgtgattt cgcaaaatag
     3301 cgcgtacgtt tttggcaatt gccagtacga cgtgtttttc ctgagaaccg ttgcggccaa
     3361 tcgcgccggt atcgatgccg ccgtgtccgg ggtcgagcat caccaaccgt ttactgccgg
     3421 tttttttggt tttgggtttg ctgtgaccat tactggtttt tagcgtttct tctttggcta
     3481 ttgcgtgcga catacctgac agcgtcaggg ccgccagacc tgttttgagt acctggcggc
     3541 gcgatgtgag agtttttagg agtttaaaag tgctcatacg gcctgagttg tgaaaattaa
     3601 gttcaagatg ttatatcgta tcgcgtaatc cgttacgacg gttggtgatg agaattgttt
     3661 tacttttcat ttcaatacgt gacacatcgc cattatgcca ttttttccgc tacatcgcgt
     3721 cagatattgg ctgaatcaga tgtttgcgcc ataatcttgg tttttccacc cgaaaaggca
     3781 acgaatacca tggaaatacg cgtttttcgc caggaagatt tcgaagaggt gattaccctc
     3841 tgggagcgtt gcgacctgct gcgtccatgg aacgatcctg aaatggatat tgaacgcaag
     3901 gtgaatcacg atgtcagctt gttcctcgtt gcggaagtta gcggcgaagt cgtcggtacg
     3961 gtaatgggcg gttatgacgg gcatcgcggc tcggcgtatt acctgggcgt tcacccggag
     4021 ttccgcgggc gcggcattgc gaatgcgctg cttaaccggc tggaaaaaaa actcatcgcc
     4081 cgcgggtgtc cgaaaatcca aattatggtg cgtgatgata acgacgttgt gctgggcatg
     4141 tatgaacgtc tggggtatga gcattctgac gccctaagtt tgggtaaacg cctgattgaa
     4201 gatgaagagt actgagtttc atccagccga ttatgatgta cacggatgtt tacgcctgcc
     4261 gtttctgttc tggtgcgtac tgctacttca ggcgcgcgcc tgggtactct ttgtcattgc
     4321 cggttcatcc cgtggacagg gtaatacttt gttaaacttt ttttatcccg accatgataa
     4381 tttttggctg gggctgttgc ccggcgttcc ggcggtagtg gcgtttttac tcagcgggcg
     4441 gcgtgaagcg gttcctggtg tgtggcgct
//
LOCUS       DAGWFR010000251         4371 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.254, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000251 DAGWFR010000000
VERSION     DAGWFR010000251.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4371)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4371)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4371
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.254"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..2675
                     /gene="mdtC"
                     /locus_tag="MOX77_004366"
     CDS             <1..2675
                     /gene="mdtC"
                     /locus_tag="MOX77_004366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit MdtC"
                     /protein_id="HCA3359751.1"
                     /translation="APIMILTLTSESWSQGKLYDFASTQLAQTIAQIDGVGDVDVGGS
                     SLPAVRVGLNPQALFNQGVSLDEVREAIDSANVRRPQGAIEDSVHRWQIQTNDELKTA
                     AEYQPLIIHYNNGAAVRLGDVASVTDSVQDVRNAGMTNAKPAILLMIRKLPEANIIQT
                     VDGIRAKLPELRAMIPAAIDLQIAQDRSPTIRASLQEVEETLAISVALVILVVFLFLR
                     SGRATLIPAVAVPVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVVDDAIVVLENIAR
                     HLEARMKPLQAALQGTREVGFTVISMSLSLVAVFLPLLLMGGLPGRLLREFAVTLSVA
                     IGISLVVSLTLTPMMCGWMLKSSKPRTQPRKRGVGRLLVALQQGYGTSLKWVLNHTRL
                     VGVVFLGTVALNIWLYIAIPKTFFPEQDTGVLMGGIQADQSISFQAMRGKLQDFMKII
                     RDDPAVNNVTGFTGGSRVNSGMMFITLKPRGERKETAQQVIDRLRVKLAKEPGAKLFL
                     MAVQDIRVGGRQANASYQYTLLSDSLPALREWEPKIRKALSALPQLADVNSDQQDNGA
                     EMNLIYDRDTMSRLGIDVQAANSLLNNAFGQRQISTIYQPMNQYKVVMEVDPRYSQDI
                     SALEKMFVINRDGKAIPLSYFAQWRPANAPLSVNHQGLSAASTIAFNLPTGTSLSQAT
                     EAIDRTMTQLGVPSTVRGSFSGTAQVFQQTMNSQLILIVAAIATVYIVLGILYESYVH
                     PLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRS
                     GGLTPEQAIFQACLLRFRPIMMTTLAALFGALPLVLSGGDGSELRQPLGITIVGGLVM
                     SQLLTLYTTPVVYLFFDRLRLRFSRKNSKPVVEI"
     gene            2672..4084
                     /locus_tag="MOX77_004367"
     CDS             2672..4084
                     /locus_tag="MOX77_004367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3359752.1"
                     /translation="MTEFPDNTRWQLWIVAFGFFMQSLDTTIVNTALPSMAKSLGESP
                     LHMHMVVVSYVLTVAVMLPASGWLADKIGVRNIFFAAIVLFTLGSLFCALSGTLNQLV
                     LARVLQGVGGAMMVPVGRLTVMKIVPRAQYMAAMTFVALPGQIGPLLGPALGGVLVEY
                     ASWHWIFLINIPVGIVGAMATFMLMPNYTIETRRFDLPGFLLLAIGMAVLTLALDGSK
                     SMGISPWTLAGLAAGGAAAILLYLFHAKKNSGALFSLRLFRTPTFSLGLLGSFAGRIG
                     SGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQIVNRFGYRRVLVATT
                     LGLALVSLLFMSVALLGWYYLLPLVLLLQGMVNSARFSSMNTLTLKDLPDTLASSGNS
                     LLSMIMQLSMSIGVTIAGMLLGMFGQQHIGIDSSATHHVFMYTWLCMAVIIALPAIIF
                     ARVPNDTQQNMVISRRKRSL"
     gene            4084..>4371
                     /locus_tag="MOX77_004368"
     CDS             4084..>4371
                     /locus_tag="MOX77_004368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     BaeA"
                     /protein_id="HCA3359753.1"
                     /translation="MKVWRPGITGKLFLAIFATCIVLLISMHWAVRVSFERGFIDYIK
                     HGNEQRLQMLGDALGDQYQQHGNWRFLRNNDRFVFQILRSFEHDNDRDKPGP"
BASE COUNT          893 a         1192 c         1231 g         1055 t
ORIGIN      
        1 acgcgccgat tatgatttta acgctcacct cagagagctg gtcacagggc aaactgtatg
       61 atttcgcctc tacccaactg gcgcaaacca tcgcgcaaat tgacggcgtt ggcgacgttg
      121 acgtcggcgg cagctccctg cccgcagtac gtgtaggctt aaacccgcag gcgctcttta
      181 accagggcgt ctcgctggat gaggtccgcg aagcgatcga cagcgccaac gtacgccgac
      241 cgcaaggcgc aattgaagat agcgtccacc gctggcaaat ccagaccaac gacgaactga
      301 aaaccgccgc cgaatatcag ccgctgatta ttcactataa caacggcgcg gcggtacgcc
      361 tgggtgacgt cgccagcgtc accgactcgg tgcaggatgt ccgtaacgcc gggatgacga
      421 acgctaaacc cgctattttg ttgatgatcc gcaagctgcc ggaggccaac attattcaga
      481 cggtcgacgg catccgggca aaactgccgg aactgcgggc aatgatcccc gccgctatcg
      541 atttacaaat cgcccaggat cgttcgccga cgattcgcgc atcgctgcaa gaggtagaag
      601 agacgctggc tatctctgtc gcgctggtga tcctggtggt gtttttattc ctgcgttccg
      661 ggcgcgccac gctaatcccc gccgtcgccg ttcccgtttc gctcatcggc accttcgccg
      721 ccatgtatct gtgcggcttc agcctcaaca atctgtcgct gatggcgctg actatcgcga
      781 ccggatttgt cgttgatgat gccattgtgg tgctggaaaa tatcgcccgc catctggagg
      841 cgagaatgaa acctttgcag gcggcattac agggtacgcg ggaagtcggg tttacggtca
      901 tctccatgag tctgtcgctg gtggcggtat ttctgccgct gctgttaatg ggcggcctgc
      961 caggacgatt attacgggaa ttcgccgtta ccctctcggt ggcgattggc atttcgctgg
     1021 tggtctcgct cacactgacg ccgatgatgt gcggctggat gcttaaatca agcaaaccgc
     1081 gcacccaacc gcgtaaacgg ggcgttggcc gtttgctggt cgccttgcaa cagggttacg
     1141 gcacgtcgtt aaaatgggtg cttaaccata cgcgtcttgt cggtgtggtt tttcttggca
     1201 ccgttgcgct gaacatctgg ctttatatcg ccatccctaa aacattcttt ccggagcagg
     1261 acaccggcgt gttgatgggc ggtattcagg ctgaccagag catctctttc caagccatgc
     1321 gcggcaagct gcaggatttt atgaaaatta ttcgcgacga tccggcggtg aataatgtca
     1381 ctggttttac cggcggatcg agggtgaata gcggcatgat gtttattacg ctgaagccgc
     1441 gcggcgaacg caaagagacg gcgcagcaag tcattgaccg actgcgggtc aaactggcaa
     1501 aagaacccgg cgccaagctg tttctgatgg cggtacagga tattcgcgtc ggcgggcggc
     1561 aggctaacgc cagttaccaa tatacgttgc tgtctgactc cctgccggcg ctgcgcgagt
     1621 gggagccgaa aatacgcaaa gcgctctcgg ccctgccgca actggcggac gtaaactccg
     1681 accagcagga taacggcgcg gagatgaacc ttatctacga ccgcgacacc atgtcacggc
     1741 tgggcattga tgttcaggcc gcaaacagcc tgttaaataa cgctttcggc cagcggcaaa
     1801 tttccaccat ttatcagccg atgaaccagt ataaagtggt gatggaagtc gatccgcgct
     1861 atagccagga tatcagcgcg ctggagaaaa tgttcgttat caaccgcgac ggaaaagcga
     1921 ttcctctctc ttatttcgcc caatggcggc ccgccaatgc gccgctgtcg gtaaaccatc
     1981 agggactttc cgcagcgtcc acgattgcct ttaacttgcc gaccggcaca tcgttatcgc
     2041 aggcgacgga ggccattgat cgcaccatga cgcagcttgg cgtcccctcg acggtacgcg
     2101 gcagtttttc cggaacggcg caagtcttcc agcagaccat gaattcacag cttattttga
     2161 tagtggcggc gatcgctacc gtctacattg tgctggggat actgtacgaa agctacgtcc
     2221 atccgctgac cattctctct actctgccat cggcgggcgt tggggcgctt ctggcgctgg
     2281 aactcttcaa tgcccctttc agcctaatcg ccctgatagg gatcatgcta ttaattggca
     2341 ttgtgaagaa aaacgccatt atgatggtcg attttgcgct tgaagcgcaa cgaagcggcg
     2401 gcctgacacc ggaacaagcc attttccagg cctgcttgtt acgcttccgt ccaataatga
     2461 tgaccacgct ggcggcgctg ttcggcgcac tgccattggt gttatctggc ggagacggtt
     2521 cggaattacg gcagccgctg gggataacca ttgtcggcgg tttggtcatg agccagctcc
     2581 tgacgctcta taccacgccg gtggtgtacc tctttttcga ccgtctgcgg ctgcgttttt
     2641 cgcgtaaaaa tagcaaaccg gtagtagaga tatgacagaa tttcctgaca acacccgctg
     2701 gcaactctgg attgtggcat tcggcttttt tatgcagtcg ctggatacca ccatcgtcaa
     2761 cactgcgctg ccttccatgg cgaaaagcct gggggaaagc ccgctgcata tgcacatggt
     2821 agtggtgtca tatgttctca ccgtcgccgt gatgctcccc gccagcggct ggctggcaga
     2881 caaaatcggc gtgcgtaata ttttctttgc cgccatcgtg ctgttcacgc tgggttcgct
     2941 gttttgcgcc ctctccggta cgcttaatca actggtatta gcgcgagttt tacaaggcgt
     3001 aggcggcgcg atgatggtgc cggtcggacg cctgacggtc atgaaaatcg tgccgcgtgc
     3061 gcaatatatg gcggcgatga ccttcgtcgc cctaccggga cagatcgggc cgttactcgg
     3121 ccccgcgctg ggcggggtgc tggtggaata tgcttcatgg cactggatct ttctgatcaa
     3181 tatcccggtg ggaattgtcg gcgctatggc gacctttatg ctgatgccaa actacaccat
     3241 agagacccgg cgctttgatc tgccggggtt cctgctgtta gctatcggca tggcggtact
     3301 cacgctggcg ctggacggta gtaaaagcat ggggatttcg ccctggacat tagccggact
     3361 tgctgcgggt ggcgcggcag ccattctgct ctatctcttc catgccaaaa aaaactcagg
     3421 tgcgttattc agcctgcgat tgttccgcac gcccacgttt tcactggggt tgctgggcag
     3481 ttttgccggg cgtatcggca gcggtatgct gccgtttatg acgccggtct ttttacaaat
     3541 tggtcttggt ttttcaccgt ttcatgccgg tttgatgatg atccccatgg tgctgggcag
     3601 catgggaatg aagcggattg tggtgcagat agttaaccgt tttggctatc gtcgggttct
     3661 ggtagcgacc acgctcggac tggcattggt tagcctgttg tttatgtcgg tcgcgctgct
     3721 cggctggtat tatctcctgc cgctggtact gcttttgcag ggaatggtga actcggcgcg
     3781 cttttcttcc atgaatacct taacgctaaa agaccttccc gatacgctgg ccagcagcgg
     3841 caatagctta ttatcgatga ttatgcagct ctcgatgagt attggcgtca ctattgccgg
     3901 aatgctgctg ggtatgtttg gccaacagca tatcgggata gacagtagcg ccacacatca
     3961 cgtctttatg tacacctggt tatgtatggc ggttattatc gcgctaccgg cgataatttt
     4021 tgcccgcgtg ccgaacgata cacagcaaaa catggtcatt tcacggcgta aaaggagcct
     4081 gtaatgaaag tctggcggcc cggaatcacc ggcaagctgt ttctggcgat tttcgccacc
     4141 tgcatcgtgc tgctgatcag tatgcattgg gccgtgcgcg tcagttttga acgcggattt
     4201 attgactata tcaaacacgg caacgagcag cggctacaaa tgctgggcga tgcgctgggc
     4261 gaccagtacc agcaacacgg caactggcgt tttttacgta acaatgatcg cttcgttttc
     4321 cagattctgc gttcatttga gcatgacaac gaccgggata aacccggccc c
//
LOCUS       DAGWFR010000252         4341 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.255, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000252 DAGWFR010000000
VERSION     DAGWFR010000252.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4341)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4341)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4341
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.255"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            112..1140
                     /gene="murB"
                     /locus_tag="MOX77_004369"
     CDS             112..1140
                     /gene="murB"
                     /locus_tag="MOX77_004369"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HCA3359754.1"
                     /translation="MTHSLKPWNTFGIDHCAKHIVCAENEQQLLSAWQQATREGLPVM
                     ILGEGSNVLFLENYAGTVILNRLKGIEVNETADAWHLHVGAGENWHQLVRYALDNNMP
                     GLENLALIPGCVGSSPIQNIGAYGVELHRVCDYVDCVELETGKRLRLSAAECRFGYRD
                     SIFKNEYQDRVAIVAVGLRLSKQWQPVLTYGDLTRLDPKTVTAQQVFDAVCHMRTTKL
                     PDPKVNGNAGSFFKNPVVAADIAMELLERFPNAPHYPQADGSVKLAAGWLIDQCQLKG
                     VTIGGAAVHRQQALVLINANDATSKDVVALAHHVRQKVGEKFNVWLEPEVRFIGQFGE
                     VNAVESIA"
     gene            1137..2099
                     /gene="birA"
                     /locus_tag="MOX77_004370"
     CDS             1137..2099
                     /gene="birA"
                     /locus_tag="MOX77_004370"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional biotin--[acetyl-CoA-carboxylase]
                     ligase/biotin operon repressor BirA"
                     /protein_id="HCA3359755.1"
                     /translation="MKDTTVPLTLISLLADGEFHSGEQLGERLGMSRAAINKHIQTLR
                     DWGVDVFTVPGKGYSLPEPIQLLDADRIHSQLDSGNVAVLPVIDSTNQYLLDRIGELR
                     SGDACVAEYQQAGRGRRGRKWFSPFGANLYLSMYWRLEQGPAAAIGLSLVIGIVMAEV
                     LRELGADKVRVKWPNDLYLLDRKLAGILVELTGKTGDAAQIVIGAGINMAMRRVEEDV
                     INQGWITLQEAGITLDRNMLAAKLIYKLRAALELFEQEGLSPYLSRWKKLDNFIDRPV
                     KLIIGDKEIFGISRGIDTQGALLLEQDGVIKPWMGGEISLRSAE"
     gene            complement(2134..3084)
                     /gene="coaA"
                     /locus_tag="MOX77_004371"
                     /gene_synonym="panK"
     CDS             complement(2134..3084)
                     /gene="coaA"
                     /locus_tag="MOX77_004371"
                     /gene_synonym="panK"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I pantothenate kinase"
                     /protein_id="HCA3359756.1"
                     /translation="MSIKEQSLMTPYLQFDRSQWAALRDSVPMTLTEDEIAQLKGINE
                     DLSLEEVAEIYLPLSRLLNFYISSNLRRQAVLEQFLGTNGQRIPYIISIAGSVAVGKS
                     TTARVLQALLSRWPEHRRVELITTDGFLHPNQVLKERGLMKKKGFPESYDMHRLVKFV
                     SDLKSGVPNVTAPVYSHLIYDVIPEGDKTVAQPDILILEGLNVLQSGMDYPHDPHHVF
                     VSDFVDFSIYVDAPEELLQTWYINRFLKFREGAFTDPDSYFHNYAKLSKEEAVNTAAS
                     LWKEINWLNLKQNILPTRERASLIMTKSANHAVEQVRLRK"
     gene            complement(3293..3466)
                     /locus_tag="MOX77_004372"
     CDS             complement(3293..3466)
                     /locus_tag="MOX77_004372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3359757.1"
                     /translation="METCVLMQLKNCIKCSIAHILRYKRQKCSNFKQESINFRHFTNR
                     LTRIRRGISTLRR"
     gene            3486..3561
                     /locus_tag="MOX77_004373"
     tRNA            3486..3561
                     /locus_tag="MOX77_004373"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3519..3521,aa:Thr,seq:tgt)
     gene            3570..3654
                     /locus_tag="MOX77_004374"
     tRNA            3570..3654
                     /locus_tag="MOX77_004374"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3604..3606,aa:Tyr,seq:gta)
     gene            3771..3845
                     /locus_tag="MOX77_004375"
     tRNA            3771..3845
                     /locus_tag="MOX77_004375"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3804..3806,aa:Gly,seq:tcc)
     gene            3852..3927
                     /locus_tag="MOX77_004376"
     tRNA            3852..3927
                     /locus_tag="MOX77_004376"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3885..3887,aa:Thr,seq:ggt)
     gene            4043..>4341
                     /gene="tuf"
                     /locus_tag="MOX77_004377"
     CDS             4043..>4341
                     /gene="tuf"
                     /locus_tag="MOX77_004377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312217.1"
                     /note="EF-Tu; promotes GTP-dependent binding of
                     aminoacyl-tRNA to the A-site of ribosomes during protein
                     biosynthesis; when the tRNA anticodon matches the mRNA
                     codon, GTP hydrolysis results; the inactive EF-Tu-GDP
                     leaves the ribosome and release of GDP is promoted by
                     elongation factor Ts; many prokaryotes have two copies of
                     the gene encoding EF-Tu; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HCA3359758.1"
                     /translation="MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAA
                     RAFDQIDNAPEEKARGITINTSHVEYDTPTRHYAHVDCPGHADYVKNMITGAAQM"
BASE COUNT         1112 a         1026 c         1123 g         1080 t
ORIGIN      
        1 gcaagttcgg cacaatgcct gtgtacaccg ccttattccg tcgacataac cgcaagcctt
       61 cccaacccag atacggtaaa ctattgccga ttgagtatca ggaaagcagc catgacccat
      121 tccctaaaac cctggaatac cttcggcatt gatcattgtg caaagcacat cgtatgcgct
      181 gaaaacgaac aacaactact gagcgcctgg cagcaagcaa ctcgtgaggg actgccggtt
      241 atgatcctgg gtgaaggaag caacgtcctg tttctggaaa attacgccgg caccgtgatc
      301 cttaaccgcc tgaaaggcat tgaggtgaat gaaaccgcgg acgcctggca cctacacgtc
      361 ggcgcaggcg aaaactggca tcagctggtt cgctatgcgc tggacaacaa catgcccggc
      421 ctggagaatc tggcgctcat ccctggctgc gttggttcct cgcctataca gaatattggc
      481 gcgtatggcg tagaactaca tcgcgtctgc gactacgttg actgcgttga actggaaacg
      541 ggaaaacgtc tgcgtttgtc cgcggcggaa tgccgtttcg gctatcgtga cagtatcttc
      601 aaaaatgaat atcaggatcg cgttgcgatc gtcgcggtgg gtctgcgttt gtcaaagcaa
      661 tggcagccgg tgttgaccta tggcgatctt actcgtctgg acccgaaaac ggtcaccgcg
      721 caacaggtgt ttgatgctgt atgccatatg cgcaccacaa aattgccgga tcctaaagtg
      781 aatggcaatg cgggcagctt ttttaaaaat cccgttgtcg cagccgatat cgctatggaa
      841 ctgttagaac gatttcccaa cgcgccgcat taccctcagg cagacggctc agtgaagctg
      901 gcggcaggct ggctgataga tcaatgtcag ttgaaaggcg tcaccattgg cggcgctgcg
      961 gtgcatcgcc aacaggcgct ggtattgatt aatgcgaatg atgcgacaag taaagatgtg
     1021 gtggcgctgg cgcatcatgt ccggcaaaaa gtgggtgaaa aatttaatgt ctggctggag
     1081 cctgaggttc gctttattgg tcagttcgga gaggtgaacg ctgtggagag cattgcatga
     1141 aagatactac cgttcccctg acgctgatct cactacttgc cgacggagag tttcactcag
     1201 gcgagcagtt gggtgaacgg ctgggaatga gccgtgcggc tattaataaa catatccaga
     1261 cattacgcga ctggggagta gatgtattta ccgttcccgg gaaaggatat agcttaccgg
     1321 aacccatcca gttactggat gctgaccgta tacatagcca actggatagc ggaaacgtgg
     1381 cggtattgcc cgttatcgat tcaaccaatc agtatttact tgatcgaatt ggcgagctgc
     1441 gttcaggcga tgcctgtgta gcagaatacc aacaggcggg gcgtggtcgt cgcgggcgta
     1501 aatggttctc accgtttggt gcgaatctat atctttcaat gtactggcgt ctggagcagg
     1561 ggcctgcggc ggcaataggc ttgagtctgg tcattggaat tgtgatggcg gaagtgctgc
     1621 gtgaactggg cgcagataaa gttcgtgtga agtggcctaa cgacctttac ctactggatc
     1681 gcaaactggc gggtattctg gtcgagttaa ccggtaaaac gggcgatgcc gcacaaatag
     1741 tgattggcgc tggtattaac atggcaatgc gtcgtgtaga agaggacgtg ataaatcagg
     1801 gatggatcac actacaagag gccggaatta cgctcgaccg caatatgctg gccgcaaagc
     1861 tgatttataa gctacgtgct gcgcttgagc tttttgagca agaaggtctt tctccttatc
     1921 tttcgcgctg gaaaaaactg gataatttta ttgatcgtcc ggtaaaacta attattggcg
     1981 acaaagaaat atttggtatt tcccgcggca ttgatactca gggcgcatta ttgcttgaac
     2041 aggatggcgt gattaaaccc tggatgggcg gagaaatatc gctgcgaagc gccgaatagt
     2101 aaaaaagggg agtcggtact cccctttttt ctgttatttc cgcaatctta cctgttccac
     2161 cgcatggtta gcgctcttgg tcataataag gctggcacgt tctcgcgtag gtaagatatt
     2221 ttgttttaaa ttcaaccagt taatttcttt ccaaagcgaa gctgctgtat taacagcttc
     2281 ttctttagat aatttcgcat aattgtggaa ataagagtca ggatcggtaa acgccccttc
     2341 gcggaatttc aggaagcgat tgatatacca cgtctgaaga agttcttctg gcgcatcaac
     2401 gtaaatagag aaatcaacga aatcagagac aaatacatgg tgcggatcgt gaggataatc
     2461 cataccgctt tgtaaaacat tcaaaccttc aagaatcaat atatcaggct gagcgacggt
     2521 tttatcccct tcaggaataa catcgtaaat caaatgagaa tagactggcg ccgtcacgtt
     2581 cggtacgccc gacttgaggt cagaaacgaa tttcaccagt cggtgcatat catacgattc
     2641 ggggaacccc tttttcttca ttaacccgcg ttctttcaac acctggtttg ggtggaggaa
     2701 gccgtctgtg gtaatcaatt caacacggcg gtgttccggc cagcgactca gcaacgcttg
     2761 cagaacgcgt gctgtcgtgc ttttacccac tgcgacgctg cccgcgatac tgatgatgta
     2821 agggattcgc tggccgttag tgcccagaaa ctgttccagg acagcctgac gacgcagatt
     2881 tgaactgata tagaaattta gcaaacggga gagaggtaaa tatatttctg caacttcttc
     2941 cagcgataaa tcttcattaa tgccttttaa ctgcgcgatc tcatcctcgg tcagggtcat
     3001 cggcacagaa tcgcgaagcg cagcccactg gctgcgatca aactgtaggt aaggcgtcat
     3061 taacgattgc tcttttatac tcataagcat gtttctggct gctattgcta catcagttca
     3121 gcgatgaacg agggccatcc ctgacatgca acggcacgtc acatttaagt taatttggac
     3181 aatgggcagg agggtaacac cagatgggga ggaataataa gaaaaaatct cgctgtgaaa
     3241 gctatccctg agaagcaatg tgacgaatat accagataca gaagattgct ttctatcgac
     3301 ggagcgttga aatgccgcgt cgtatcctgg tcagacggtt ggtaaaatgc cgaaaattta
     3361 tgctctcttg tttgaaatta gagcattttt gtctcttata gcgcaaaatg tgagcgatag
     3421 aacattttat gcaatttttt agttgcatga gcacgcaggt ctccatagaa tgcgcgctac
     3481 ttgatgccga cttagctcag taggtagagc aactgacttg taatcagtag gtcaccagtt
     3541 cgattccggt agtcggcacc atcaagtccg gtggggttcc cgagcggcca aagggagcag
     3601 actgtaaatc tgccgtcaca gacttcgaag gttcgaatcc ttcccccacc accattttcg
     3661 gccgcgcgat ggcgcagccc gagacgataa gttcgcttac cggctcgaat aaagagagtt
     3721 tctctcgata ttcagtgcag aatgaaaatc aggtagccga gttccaggat gcgggcatcg
     3781 tataatggct attacctcag ccttccaagc tgatgatgcg ggttcgattc ccgctgcccg
     3841 ctccaagatg tgctgatata gctcagttgg tagagcgcac ccttggtaag ggtgaggtcg
     3901 gcagttcgaa tctgcctatc agcaccactt cttttctcct tcctgttttt ctcttctgtt
     3961 tattagcatt caacaagtcg ggcgtgttgc ctggttgatg tggtgatatc accgatttat
     4021 ccgtgtctta gagggacaat cgatgtctaa agaaaagttt gaacgtacaa aaccgcacgt
     4081 taacgtcggt actatcggcc acgttgacca tggtaaaaca acgctgaccg ctgccattac
     4141 taccgtactg gctaaaacct acggcggtgc cgcccgcgca ttcgaccaga tcgataacgc
     4201 gccggaagaa aaagcgcgtg gtatcaccat caacacttct cacgttgaat acgatacccc
     4261 gacccgccac tacgcacacg tagactgccc ggggcacgcc gactatgtta aaaacatgat
     4321 caccggtgct gctcagatgg a
//
LOCUS       DAGWFR010000253         4338 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.256, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000253 DAGWFR010000000
VERSION     DAGWFR010000253.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4338)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4338)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4338
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.256"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(102..383)
                     /locus_tag="MOX77_004378"
                     /pseudo
     CDS             complement(102..383)
                     /locus_tag="MOX77_004378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001120888.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase zinc-binding domain-containing
                     protein"
     gene            complement(530..1390)
                     /locus_tag="MOX77_004379"
     CDS             complement(530..1390)
                     /locus_tag="MOX77_004379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032489893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class A broad-spectrum beta-lactamase TEM-1"
                     /protein_id="HCA3359759.1"
                     /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGY
                     IELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVE
                     YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRL
                     DRWEPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPL
                     LRSALPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIA
                     EIGASLIKHW"
     gene            complement(1573..1824)
                     /locus_tag="MOX77_004380"
                     /pseudo
     CDS             complement(1573..1824)
                     /locus_tag="MOX77_004380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221001.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
     gene            1890..2594
                     /locus_tag="MOX77_004381"
     CDS             1890..2594
                     /locus_tag="MOX77_004381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS6-like element IS26 family transposase"
                     /protein_id="HCA3359760.1"
                     /translation="MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDH
                     STIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTV
                     DFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDV
                     EHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYY
                     GDPLGEMRLVSRVFEM"
     gene            complement(2655..3491)
                     /locus_tag="MOX77_004382"
     CDS             complement(2655..3491)
                     /locus_tag="MOX77_004382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000480972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase APH(6)-Id"
                     /protein_id="HCA3359761.1"
                     /translation="MFMPPVFPAHWHVSQPVLIADTFSSLVWKVSLPDGTPAIVKGLK
                     PIEDIADELRGADYLVWRNGRGAVRLLGRENNLMLLEYAGERMLSHIVAEHGDYQATE
                     IAAELMAKLYAASEEPLPSALLPIRDRFAALFQRARDDQNAGCQTDYVHAAIIADQMM
                     SNASELRGLHGDLHHENIMFSSRGWLVIDPVGLVGEVGFGAANMFYDPADRDDLCLDP
                     RRIAQMADAFSRALDVDPRRLLDQAYAYGCLSAAWNADGEEEQRDLAIAAAIKQVRQT
                     SY"
     gene            complement(3491..4294)
                     /locus_tag="MOX77_004383"
                     /note="aph(3'')-Ib"
     CDS             complement(3491..4294)
                     /locus_tag="MOX77_004383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010890156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase APH(3'')-Ib"
                     /protein_id="HCA3359762.1"
                     /translation="MNRTNIFLGESHSDWLPVRGGESGDFVFRRGDGHAFAKIAPASR
                     RGELAGERDRLIWLKGRGVACPEVINWQEEQEGACLVITAIPGVPAADLSGADLLKAW
                     PSMGQQLGAVHSLSVDQCPFERRLSRMFGRAVDVVSRNAVNPDFLPDEDKSTPQLDLL
                     ARVERELPVRLDQERTDMVVCHGDPCMPNFMVDPKTLQCTGLIDLGRLGTADRYADLA
                     LMIANAEENWAAPDEAERAFAVLFNVLGIEAPDRERLAFYLRLDPLTWG"
BASE COUNT         1082 a         1190 c         1074 g          992 t
ORIGIN      
        1 aagcgacttc tcctatcccc tgggaacaca tcaatctcac cggagaatat cgctggccaa
       61 agccttagcg taggattccg ccccttcccg caaacgaccc caaacaggaa acgcagctga
      121 aacgggaagc tcaacaccca ctgacgcatg ggttgttcag gcagtacttc atcaaccagc
      181 aaggcggcac tttcggccat ccgccgcgcc ccacagctcg ggcagaaacc gcgacgctta
      241 cagctgaaag cgaccaggtg ctcggcgtgg caagactcgc agcgaacccg tagaaagcca
      301 tgctccagcc gcccgcattg gagaaattct tcaaattccc gttgcacata gcccggcaat
      361 tcctttccct gctctgccat aaggggtctg acgctcagtg gaacgaaaac tcacgttaag
      421 ggattttggt catgagatta tcaaaaagga tcttcaccta gatcctttta aattaaaaat
      481 gaagttttaa atcaatctaa agtatatatg agtaaacttg gtctgacagt taccaatgct
      541 taatcagtga ggcacctatc tcagcgatct gtctatttcg ttcatccata gttgcctgac
      601 tccccgtcgt gtagataact acgatacggg agggcttacc atctggcccc agtgctgcaa
      661 tgataccgcg agacccacgc tcaccggctc cagatttatc agcaataaac cagccagccg
      721 gaagggccga gcgcagaagt ggtcctgcaa ctttatccgc ctccatccag tctattaatt
      781 gttgccggga agctagagta agtagttcgc cagttaatag tttgcgcaac gttgttgcca
      841 ttgctgcagg catcgtggtg tcacgctcgt cgtttggtat ggcttcattc agctccggtt
      901 cccaacgatc aaggcgagtt acatgatccc ccatgttgtg caaaaaagcg gttagctcct
      961 tcggtcctcc gatcgttgtc agaagtaagt tggcagcagt gttatcactc atggttatgg
     1021 cagcactgca taattctctt actgtcatgc catccgtaag atgcttttct gtgactggtg
     1081 agtactcaac caagtcattc tgagaatagt gtatgcggcg accgagttgc tcttgcccgg
     1141 cgtcaacacg ggataatacc gcaccacata gcagaacttt aaaagtgctc atcattggaa
     1201 aacgttcttc ggggcgaaaa ctctcaagga tcttaccgct gttgagatcc agttcgatgt
     1261 aacccactcg tgcacccaac tgatcttcag catcttttac tttcaccagc gtttctgggt
     1321 gagcaaaaac aggaaggcaa aatgccgcaa aaaagggaat aagggcgaca cgaaaatgtt
     1381 gaatactcat actcttcctt tttcaatatt attgaagcat ttaccagggt tattgtctca
     1441 tgagcggata catatttgaa tgtatttaga aaaataaaca aataggggtt ccgcgcacat
     1501 ttccccgaaa agtgccacct gacgtctaag aaaccattat tatcatgaca ttaacctata
     1561 aaaataggcg tatcacgagg ccctttcgtc ttcaagaatt ttataaaccg tggagcgggc
     1621 aatactgagc tgatgagcaa tttccgttgc accagtgccc ttctgatgaa gcgtcagcac
     1681 gacgttcctg tccacggtac gcctgcggcc aaatttgatt cctttcagct ttgcttcctg
     1741 tcggccctca ttcgtgcgtt ctaggatcct ccggcgttca gcctgtgcca cagccgacag
     1801 gatggtgacc accatttgcc ccatatggca ctgttgcaaa tagtcggtgg tgataaactt
     1861 atcatcccct tttgctgatg gagctgcaca tgaacccatt caaaggccgg cattttcagc
     1921 gtgacatcat tctgtgggcc gtacgctggt actgcaaata cggcatcagt taccgtgagc
     1981 tgcaggagat gctggctgaa cgcggagtga atgtcgatca ctccacgatt taccgctggg
     2041 ttcagcgtta tgcgcctgaa atggaaaaac ggctgcgctg gtactggcgt aacccttccg
     2101 atctttgccc gtggcacatg gatgaaacct acgtgaaggt caatggccgc tgggcgtatc
     2161 tgtaccgggc cgtcgacagc cggggccgca ctgtcgattt ttatctctcc tcccgtcgta
     2221 acagcaaagc tgcataccgg tttctgggta aaatcctcaa caacgtgaag aagtggcaga
     2281 tcccgcgatt catcaacacg gataaagcgc ccgcctatgg tcgcgcgctt gctctgctca
     2341 aacgcgaagg ccggtgcccg tctgacgttg aacaccgaca gattaagtac cggaacaacg
     2401 tgattgaatg cgatcatggc aaactgaaac ggataatcgg cgccacgctg ggatttaaat
     2461 ccatgaagac ggcttacgcc accatcaaag gtattgaggt gatgcgtgca ctacgcaaag
     2521 gccaggcctc agcattttat tatggtgatc ccctgggcga aatgcgcctg gtaagcagag
     2581 tttttgaaat gtaaggcctt tgaataagac aaaaggctgc ctcatcgcta actttgcaac
     2641 agtgcccttg atatctagta tgacgtctgt cgcacctgct tgatcgcggc cgcgatagct
     2701 agatcgcgtt gctcctcttc tccatccgcg ttccaagctg cggaaaggca cccataagcg
     2761 tacgcctggt cgagcaggcg acgcggatcg acgtccagcg cacgagagaa tgcgtccgcc
     2821 atctgtgcaa tgcgtctagg atcgagacaa aggtcgtctc tgtcagccgg atcgtagaac
     2881 atattggcgg cgccaaagcc cacttcaccg accagaccga cgggatctat caccagccag
     2941 ccgcgactgg agaacatgat gttttcatga tgcagatcgc catgtagccc acgcagttcc
     3001 gaggcattgc tcatcatttg atcggctata atcgccgcgt ggacgtagtc agtttgacaa
     3061 cctgcgtttt gatcatcgcg cgcccgctga aacaaagctg caaagcgatc ccggatcggg
     3121 agaagggcag aaggcagggg ttcctcagat gcggcataca gcttcgccat tagttccgct
     3181 gcaatttcgg tcgcctggta gtcgccgtgc tcggcaacga tgtgagagag cattcgctcc
     3241 ccggcatatt cgagcaacat cagattgttc tcacgaccga gcaaccggac tgctcccctc
     3301 ccattgcgcc ataccagata gtcggccccg cgcagttcat cagcaatgtc ttctataggt
     3361 ttcaatccct tgacgattgc aggagtcccg tctggcaatg aaactttcca aacgaggctg
     3421 gaaaaggtgt ccgcaatgag aacaggttgc gaaacgtgcc aatgagcagg aaaaacaggc
     3481 ggcatgaaca tcaaccccaa gtcagagggt ccaatcgcag atagaaggca aggcgttcgc
     3541 ggtcgggggc ttcgatcccc aatacattga ataggacagc gaaggcgcgc tctgcttcat
     3601 ctggcgctgc ccagttctct tcggcgttag caatcatgag tgccaaatcg gcatagcgat
     3661 ctgctgttcc gagccgccca aggtcgatca gacccgtgca ttgaagagtt ttagggtcca
     3721 ccatgaagtt cggcatgcag ggatcaccat ggcaaacaac catatcggtg cgctcttggt
     3781 cgagccgcac cggtagctct cgttcgacac gagccaaaag atcgagctgc ggcgtactct
     3841 tgtcctcgtc cggtaagaag tcgggattga cggcattgcg ggacaccaca tcaacggcgc
     3901 gtccgaacat tcgcgacagc ctgcgctcaa acggacattg atcaaccgat aggctgtgaa
     3961 cagcgccaag ttgctgcccc attgacggcc acgctttgag caaatccgct ccagacagat
     4021 cagccgccgg tactcccgga attgccgtta tcaccaagca tgcaccctcc tgttcctcct
     4081 gccagttgat gacctcgggg caagccacac ctcgaccttt gagccaaatg aggcggtcac
     4141 gctctccagc gagctcaccg cggcgggaag caggtgcgat tttcgcgaag gcatgcccgt
     4201 caccacgtcg aaaaacaaaa tcaccagatt ctccgcctct gacaggcaac cagtcagaat
     4261 gcgattcacc caaaaaaata ttagttcgat tcaatggagg ttccttcagt tttctgatga
     4321 agcgcgaata tagagaaa
//
LOCUS       DAGWFR010000254         4303 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.257, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000254 DAGWFR010000000
VERSION     DAGWFR010000254.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4303)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4303)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4303
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.257"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..814
                     /locus_tag="MOX77_004384"
     CDS             <1..814
                     /locus_tag="MOX77_004384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004203687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HCA3359763.1"
                     /translation="GEMIRFKYGLPEVTVSSLSLYTSAILEANLLPPPEPKDSWRHIM
                     DELSVISCETYRGYVRENKDFVPYFRSATPEQELGKLPLGSRPAKRRPTGGVESLRAI
                     PWIFAWTQNRLMLPAWLGAGTALQKVVEDGKQSELEAMCRDWPFFSTRLGMLEMVFSK
                     ADLWLADYYDQRLVAKTLWPLGKELRDLLEEDIKVVLAIANDSHLMADLPWIAESIQL
                     RNVYTDPLNVLQAELLYRSRLTEEQGKSPDPRVEQALMVTIAGVAAGMRNTG"
     gene            1016..2737
                     /locus_tag="MOX77_004385"
     CDS             1016..2737
                     /locus_tag="MOX77_004385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase CptA"
                     /protein_id="HCA3359764.1"
                     /translation="MQSTLLQTKPAFSWKALGWALLYFWFFSTLLQAIIYLTGYSGTN
                     GLRDSLLYSSLWLIPVFLFPGRIRVIAAVIGVVLWAASLAALSYYVIYGQEFSQSVLF
                     VMFETNANEASEYLSQYFSLKIVLVALAYTVAAILLWTRLRPVYIPSPWRYLVSFALL
                     YGLILHPIAMNTFIKHKSMEKTLDSLASRMEPAAPWQFITGYYQYRLQLASLNKLLNE
                     NDALPPLANFQDHSGDAPRTLVLVIGESTQRGRMSLYGYPRETTPELDALHKTDPGLT
                     VFNNVVTSRPYTIEILQQALTFADEKNPDWYLTKPSLMNMMKQAGYKTFWITNQQTMT
                     ARNTMLTVFDKQFYMNQQRTQSAREYDSNVLAPFKAVLADPAPKKFIIVHLLGTHIKY
                     KFRYPENQGKFDGKTDHVPPGLSSDELESYNDYDNANLYNDYVVASLIKDYKATDPNG
                     FLLYFSDHGEEVYDTPPHKTQGRNEDSPTRHMYTVPFLLWTSEKWQAAHPRDFSQDVD
                     RKYSSSELIHTWSDLAGLTYDGYDPTRSITNPQFKETTRWIGNPYKKNALIDYDTLPY
                     GDQVGNQ"
     gene            2898..3734
                     /locus_tag="MOX77_004386"
     CDS             2898..3734
                     /locus_tag="MOX77_004386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HCA3359765.1"
                     /translation="MYHDVSHLLSRLINGPLPLRQIYFASASGPAPELAYQVDFPRLE
                     IVLEGELTDMSITAPLIPCDVLYVPAGGWNIPQWQTPVTTLSILFGKQQLGFSVVYWD
                     GQQHQNLTKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQ
                     IQTASRSRALFEAIREYIDERYAAPLTRESVAQAFYISPNYLSHLFQKTGAIGFNEYL
                     NHTRLEHAKTLLKGYDLKVKEVAHRCGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLT
                     EK"
     gene            3989..>4303
                     /locus_tag="MOX77_004387"
     CDS             3989..>4303
                     /locus_tag="MOX77_004387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462990.1"
                     /note="similar to transaldolase from Escherichia coli;
                     many organisms have multiple copies; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-6-phosphate aldolase"
                     /protein_id="HCA3359766.1"
                     /translation="MELYLDTANVAEVERLARIFPIAGVTTNPSIVAASKESIWDVLP
                     RLQNAIGEEGTLFAQTMSRDAKGMVEEAKRLNNAIPGIVVKIPVTAEGLAAIKLLKKE
                     GIV"
BASE COUNT         1036 a         1182 c         1107 g          978 t
ORIGIN      
        1 gggcgagatg atccgcttca aatacggcct gccggaagtc accgtcagca gcctctcgct
       61 ctacaccagc gcaattctgg aagcaaacct gctgccgccg ccggaaccga aagacagctg
      121 gcgtcatatt atggatgagc tttccgtcat ctcctgtgaa acctaccgcg gttacgtgcg
      181 cgaaaataaa gactttgtac cgtacttccg ctccgcgacg ccggaacaag agctgggcaa
      241 attgccgctc ggctcacgtc cggcgaaacg tcgtccaact ggcggcgtcg aatcgctgcg
      301 cgcgattccg tggatcttcg cctggacgca aaaccgcctg atgctgccag cctggctggg
      361 cgcgggtact gcgctgcaaa aagtggtgga agacggtaaa caaagcgaac tggaagccat
      421 gtgccgcgac tggccgttct tctccacgcg tcttgggatg ctggaaatgg tgttctcgaa
      481 agccgacctg tggctggccg actattacga tcagcgcctg gtggcgaaaa cgctttggcc
      541 gctgggcaaa gagctacgag acctactgga agaagacatt aaagtggtgc tggcgattgc
      601 caacgattcg cacctgatgg ccgacttacc gtggattgcg gagtccattc agttaagaaa
      661 cgtttatacc gatccattaa acgtgttgca ggccgaattg ctgtatcgtt cccgtctgac
      721 tgaagagcag ggcaaatcgc ccgatcctcg cgtcgaacag gcgttgatgg tcacgattgc
      781 gggcgtcgcc gccggtatgc gcaacaccgg ctaacgccaa aagaaagccg ccctcacgca
      841 gttatgtggg ggcggcatga aatactgctg tcatcctcgt cattttttca atatattcct
      901 gtctgcattt ataaatcttt cttagcaaaa cgtgcggcat aaagcaggtt tgcttcagat
      961 tcttttaagg ttcaggcgtt acgtttggcg ctacgattaa agacaggctc tcattatgca
     1021 atccacatta ctccagacta aacccgcgtt tagctggaaa gccctgggct gggcactgct
     1081 ctacttttgg ttcttttcca ccctcctgca ggccattatt tatctcaccg gatacagtgg
     1141 gacaaacggt ctgcgggatt cgctactgta cagctcacta tggctgatcc cggtcttttt
     1201 gtttccaggc cgcatccggg ttattgctgc cgttattggc gtcgtactct gggccgcctc
     1261 gctggcggcg ctgagctatt acgtaatcta cgggcaggag ttctcgcaaa gcgtgctgtt
     1321 tgtgatgttt gaaaccaacg ccaatgaagc cagcgaatat ttaagccaat atttcagtct
     1381 gaaaattgtt cttgtcgcgc tggcttatac ggtggcggcg attttgctgt ggacacgtct
     1441 gcgcccggtt tatattccat ccccctggcg ttatctggtg tcgtttgccc tgctgtacgg
     1501 gctgatcctc catcccatcg cgatgaatac ctttatcaag cataagtcga tggagaaaac
     1561 gctggatagc ctggcgtcac gaatggaacc cgccgctccg tggcaattta ttactggcta
     1621 ctatcagtac cgtttacagc tcgcctcgct gaataaactg ctgaatgaaa acgatgccct
     1681 gccgccgctg gctaacttcc aggaccactc cggcgatgcg ccgcgcacac tggtactggt
     1741 gattggcgaa tcgacccagc gtggccgtat gagtctgtac ggttatccgc gcgaaaccac
     1801 gccggaactg gacgcgctgc ataaaaccga ccccgggctg accgtgttta ataatgtggt
     1861 aacttcgcga ccgtacacca ttgagatcct gcaacaggcg ctaacgttcg cggacgaaaa
     1921 gaacccggac tggtatctga cgaagccatc gctgatgaat atgatgaaac aggccgggta
     1981 taaaaccttc tggatcacta accagcagac gatgacggcg cgtaatacca tgctgaccgt
     2041 gtttgataag cagttctata tgaaccagca gcgcactcaa agcgcgcgcg aatatgacag
     2101 caacgtgctg gcgccgttta aagcggtgtt agccgacccg gcgccgaaaa aattcattat
     2161 tgtgcatctg ctgggaacgc acattaaata caagttccgc tatccagaaa accagggcaa
     2221 gtttgatggt aaaaccgacc atgttccgcc gggattaagc agcgacgaac tggaatcgta
     2281 taacgattac gacaacgcga acctgtataa cgactatgtt gtcgccagcc tgattaagga
     2341 ctataaagcg accgatccga acggtttcct gctctacttc tccgaccacg gtgaagaagt
     2401 gtatgacacg ccgccgcata agacgcaggg acgaaacgaa gattcgccaa cccgtcatat
     2461 gtatacggtg ccgttcctgc tgtggacctc agagaaatgg caggcggcgc atccgcgcga
     2521 cttctcacag gatgtcgatc gtaagtacag cagttccgag cttatccata cctggtcgga
     2581 cttagcgggc ctgacctatg atggttacga cccgacgcgt tccatcacca acccgcagtt
     2641 caaagagacc acgcgctgga ttggcaaccc gtataagaaa aacgcgctga ttgattatga
     2701 tacgttgccg tatggcgatc aggtcggtaa tcaatagcct gtatgttgcc cgataacgct
     2761 aacgcttatc gggcctggcg ttcttctctc ccgtagtccg gataaggcgc aaagcgccgc
     2821 tatccggcaa taattgcttg aggacatcgg ttttcgacgt tactgtttcc tctgtttgcg
     2881 atcggcaggg gattatcatg tatcacgacg tcagccacct tctctcccgt ctcatcaacg
     2941 gcccgctgcc gctgcgccag atttattttg ccagcgccag cggcccagcg ccggaactgg
     3001 cgtaccaggt ggattttccg cggctggaga ttgtgctgga gggcgagctt actgacatga
     3061 gcattaccgc cccgctcatt ccttgcgatg ttctctacgt tccggctggc ggctggaaca
     3121 tcccgcagtg gcaaacgccc gtcaccaccc tgagcattct gtttggcaaa cagcagttag
     3181 gtttcagcgt ggtctactgg gacggtcagc agcatcaaaa cctcacgaaa cagcacgttg
     3241 cgcgccgtgg cccgcgtatc ggctcgttcc tgttacaaac gcttaatgag atgcagatgc
     3301 agccgcaaga gcagcaaacg gccagattga ttgtcgccag cctactaagc cattgccgcg
     3361 atctgctcgg cagccaaatc cagaccgcct cccgtagccg tgcgcttttt gaagccattc
     3421 gggagtatat tgatgaacgc tacgccgcgc cgttgacgcg cgaatcggta gcacaggcgt
     3481 tttatatctc gccaaattac ctctcgcacc tgttccagaa aacgggagcc atcggcttta
     3541 acgaatacct gaaccatacg cgactggaac acgccaaaac gttgctgaag ggctatgacc
     3601 tgaaagtgaa agaggtggcg caccgctgcg gctttgtcga cagtaactat ttctgccgcc
     3661 tgtttcgcaa aaatacggaa cgttcgcctt cggagtatcg ccgccagtat cacagccagc
     3721 taacggagaa ataatccaca cgccaataaa gagaatacag tagataaaac gcgcatttac
     3781 tggattattg taatatcaat gcaaaaacct cactccccca catggcatac aacagcacgt
     3841 tatacgttaa tcatcaccaa cttgtgaagt aaatcacact ttaccaagag catcacattt
     3901 gtccagtttt tggcagattt gtcacatagc gcatccgggg cacgctcctt tatcctgtcc
     3961 ataacgaaaa ctcacgaaga gaaagactat ggaactctat ctggataccg ctaacgtggc
     4021 ggaagttgaa cgtctggcgc gcattttccc gattgccggc gtcaccacca atccaagcat
     4081 tgtggcagcc agcaaagaat ctatctggga tgtgctgccc aggctgcaaa acgccatcgg
     4141 cgaagaaggc actttatttg cgcagaccat gagccgcgac gcgaaaggga tggtggaaga
     4201 agccaaacgg ctgaataacg ccatccccgg cattgtggtt aaaattccgg taaccgccga
     4261 aggccttgca gcgattaaat tgctgaaaaa agaaggcatc gtg
//
LOCUS       DAGWFR010000255         4280 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.258, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000255 DAGWFR010000000
VERSION     DAGWFR010000255.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4280)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4280)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4280
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.258"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..610
                     /locus_tag="MOX77_004388"
     CDS             <1..610
                     /locus_tag="MOX77_004388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461463.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="dimethyl sulfoxide reductase anchor subunit"
                     /protein_id="HCA3359767.1"
                     /translation="ALNALRHVASSWLSREIVFASLYLAALGLGVVLLFFRKPGWQPL
                     LALAAAFGLVDVFCMAQVYIHASVATWQHSNTLALFFGTSGIIGSVVIALAYLRNAGA
                     AMRCAVVVVALMVLIRLIMQPLWLADINAVDTTVVTFPHHPLQALAQLRDIYLLGWCV
                     SAAGMLCFAAGGLRNARGTLVAGSVLLLIGEIMLRYVFFSIG"
     gene            610..1473
                     /locus_tag="MOX77_004389"
     CDS             610..1473
                     /locus_tag="MOX77_004389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HCA3359768.1"
                     /translation="MVNLTIDPAVDVTQACVRRRFRFSSCRACTDVCPAQVFSLAQGQ
                     VSIDTTRCIACGDCLFVCPVDAITDIKPVKRFVQGDTLVGPFSLQAPTVDELLLWHSQ
                     YGIRFIDIAVERSAQWLMALAGLNLALRRYGEPGWSFKHVVGAEINASRRTLFHVPRD
                     AITPCAVEPGKRRLRQAFSAFSECVPEISPQECRMCGACWRSCPENVIQFDDDTLTIA
                     AARCTGCGGCAAVCPHQALRLRFDVEPASTRHSAVHTLTCESCKRTFHALTPEHTHCV
                     LCQSPEFAVRL"
     gene            1594..2025
                     /gene="ndk"
                     /locus_tag="MOX77_004390"
     CDS             1594..2025
                     /gene="ndk"
                     /locus_tag="MOX77_004390"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000963848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HCA3359769.1"
                     /translation="MAIERTFSIIKPNAVAKNVIGSIFARFEAAGFKIVGTKMLHLTV
                     EQARGFYAEHDGKPFFDGLVEFMTSGPIVVSVLESENAVQRHRDLLGATNPANALAGT
                     LRADYADSLTENGTHGSDSLESAQREIAFFFGEGEVCPRTR"
     gene            2232..3398
                     /gene="trmG/rlmN"
                     /locus_tag="MOX77_004391"
     CDS             2232..3398
                     /gene="trmG/rlmN"
                     /locus_tag="MOX77_004391"
                     /EC_number="2.1.1.-"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA
                     (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA
                     large subunit methyltransferase RlmN"
                     /protein_id="HCA3359770.1"
                     /translation="MSEQIVTPESSTPVVLNNETKINLLDLNRQQMREFFKNLGEKPF
                     RADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIA
                     VGDQRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAA
                     KIVGAAKVTGQRPITNVVMMGMGEPLLNLTNVVPAMEIMLDDFGFGLSKRRVTLSTSG
                     VVPALDKLGDMIDVALAISLHAPNDTIRDEIVPINKKYNIETFLGAVRRYLEKSNANQ
                     GRVTIEYVMLDHVNDGTEHAHQLAELLKETPCKINLIPWNPFPGAPYGRSSNSRIDRF
                     SKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKRMQGEVIDIKAI"
     gene            3692..>4280
                     /gene="rodZ"
                     /locus_tag="MOX77_004392"
     CDS             3692..>4280
                     /gene="rodZ"
                     /locus_tag="MOX77_004392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytoskeleton protein RodZ"
                     /protein_id="HCA3359771.1"
                     /translation="MNTEATHDQNEAQTTGVRLRNAREQLGLSQQAVAERLCLKVSTV
                     RDIEEDKAPSDLASTFLRGYIRSYARLVHVPEEELLPGLEKQAPLRAAKVAPMQSFSL
                     GKRRKKRDGWLMSFTWLVLFVVVGLTGAWWWQNHKAQQEEITTMADQSTAELNADKDS
                     GQSVPLDTSAATSQDTTPAQTAPAPATPVDSTAATQ"
BASE COUNT          915 a         1103 c         1236 g         1026 t
ORIGIN      
        1 tgcgctaaac gcgttacgtc atgtcgccag ttcgtggctg agtcgcgaaa tcgtctttgc
       61 cagcctttat ctggcggcgc tggggctggg ggttgtgctg ctgtttttcc gaaagcctgg
      121 ctggcagccg ctgctggcgc tggcggcagc gttcgggctg gtggatgtat tctgcatggc
      181 gcaggtttat atccatgcct cggtggcgac ctggcagcat agcaacacgc tggcgctgtt
      241 ctttggcacg tcaggcatta tcggctcggt agtcattgcg ctggcttatc tgcgcaacgc
      301 tggcgccgca atgcgctgcg ctgtggtggt ggtcgcactg atggtgctga ttcgcctgat
      361 catgcagccg ctatggttgg cggatattaa tgcagtggat acgacggtcg tcactttccc
      421 gcatcatccg ctacaggcgc tggcgcagtt gcgcgacatc tatcttctcg gctggtgtgt
      481 ctcagcggcg ggaatgctct gctttgccgc aggcggtctg cgaaacgcca gagggacgct
      541 ggtggcgggc agcgtattgc tgcttatcgg cgagattatg ctgcgctacg tcttctttag
      601 tattggctga tggttaacct gacgatcgat ccggcggtag acgtgacgca ggcctgcgtc
      661 cgtcgtcgct ttcgtttttc ttcctgccgc gcttgcactg atgtttgtcc ggcgcaggtg
      721 ttttcgctgg cgcaggggca ggtcagcata gatacgacgc gctgcatagc ctgtggcgac
      781 tgtctgtttg tctgtcctgt tgacgccatt accgatatca aaccggttaa acgctttgtg
      841 cagggggata cgttggtggg gccgttttcg ctacaggcgc caacggtcga tgaactgctt
      901 ctctggcaca gccagtacgg tattcgcttt attgatattg cggtggagcg atcggcgcag
      961 tggctgatgg cgttggcggg gctaaattta gcgctgcgcc gctacggcga gccgggctgg
     1021 tctttcaaac acgttgtcgg cgcggaaatt aatgcctcgc ggcgcactct gtttcatgtt
     1081 ccgcgcgacg ccattacccc gtgcgccgtc gagccgggga aacggcgtct cagacaggcg
     1141 ttttccgcgt tcagcgaatg cgtacccgaa atcagtccgc aagagtgcag gatgtgcggc
     1201 gcctgctggc gaagctgccc ggaaaacgtt atccagtttg acgacgacac gctgacgata
     1261 gcggcggcgc gttgtacggg atgcggcggc tgtgcggcgg tatgtccgca tcaggcgctg
     1321 cggctgcggt ttgacgtgga acccgcctca acgcggcata gtgcggtgca tacgctcacc
     1381 tgcgaaagct gcaaacgtac tttccatgct ctcacgcctg aacacacgca ctgcgtgctg
     1441 tgtcagtccc ctgagtttgc tgtgcgcctt taacttttgt tgctaatgct cattttattt
     1501 taaaaaaatg ttacctgcat ccataggcaa ttgatgggat gctctttata atccgcgcct
     1561 gacataacaa cagaacatat ttcagaggta aacatggcta ttgaacggac tttttccatc
     1621 attaaaccca acgcggtggc aaaaaacgtt attggcagca tctttgcgcg ctttgaagct
     1681 gcagggttca aaattgttgg cactaaaatg ctgcacctga ccgttgagca ggcgcgcggc
     1741 ttctatgctg agcacgacgg caagccgttc tttgacggtc tggtggagtt catgacctct
     1801 ggccctatcg tggtatccgt gctggaaagt gaaaatgcgg tacagcgtca tcgcgatctg
     1861 cttggtgcca ccaatccggc gaacgcgttg gcggggacgc tgcgtgctga ttacgctgac
     1921 agcctgaccg aaaatggcac ccacggttcg gattcgctgg aatccgcgca gcgcgaaatc
     1981 gcctttttct tcggtgaagg cgaagtgtgc ccgcgcaccc gttaatctcc ttcgtctttc
     2041 acgctgtaaa tgcgttggcg ataaattatc ggttcaaata ttatttttgc taatgccgcg
     2101 tgcagacgtg gcatccttac gccagaattt gtacaatgca gcgcccccgg acgagcagta
     2161 agcttaccgg ggcgtttctt ttttcaaccc tccaggggcc ataacgtgta ataacgaggc
     2221 cggaatagca tatgtctgaa caaattgtca cacctgaaag cagtaccccg gtagttctta
     2281 acaacgaaac aaaaatcaac ctgctggatc taaaccgtca gcagatgcgc gagtttttta
     2341 aaaacttagg tgaaaaacct ttccgcgccg atcaggtgat gaaatggatg tatcactatt
     2401 gctgcgataa ttttgatgag atgaccgaca tcaacaaagt gttgcgcggc aaattaaaag
     2461 aggtcgcgga aattcgcgcg ccggaggtcg ttgaagagca gcgttcttca gacggcacca
     2521 tcaagtgggc gattgctgtc ggcgatcagc gcgttgaaac ggtctacatc ccggaggacg
     2581 accgcgctac gctgtgtgtc tcttcacagg tagggtgcgc gctggagtgc aaattttgtt
     2641 caactgcgca gcagggcttt aaccgcaacc tgcgcgtatc ggaaattatc ggtcaggtct
     2701 ggcgtgcggc gaaaatcgtc ggcgcggcca aagtcaccgg ccagcgtccg atcaccaacg
     2761 tagtcatgat gggaatgggc gagccattgc ttaacctgac caatgtcgta ccggcgatgg
     2821 aaattatgct cgatgacttt ggtttcggcc tgtccaaacg tcgtgtcacg ctctcaacgt
     2881 ccggcgtggt gcctgcgctg gataaactgg gcgatatgat agacgtcgcg ctggctatct
     2941 ccttacatgc gccgaatgac actattcgcg acgaaatcgt cccgatcaac aaaaaatata
     3001 atatcgaaac gttcctgggc gcggttcgcc gctatctgga gaaatccaac gccaatcagg
     3061 ggcgcgtgac gattgaatac gtgatgcttg accacgttaa cgacggcact gaacacgcgc
     3121 atcaactggc ggagctacta aaagagacgc cttgtaagat taatctgatt ccgtggaacc
     3181 cgttccctgg cgcgccgtat ggccgcagct ctaacagccg tatcgatcgc ttttctaaag
     3241 ttttgatgag ttatggtttc acgaccatcg tacgcaagac gcgtggcgat gacattgatg
     3301 cggcatgcgg acagttggca ggcgatgtga ttgaccggac taaacgtact ctgcgtaagc
     3361 gtatgcaggg agaggtgatt gacatcaagg ctatttgata gcagttgcgc cacggggcat
     3421 tcattatacc gtggcgcaat gtcagttgaa taatgtctgg cgttgtactt gtctggtcaa
     3481 taataacggt gcgtttttgt cgactttaag gcagtatgta acgatgcaac aagagtttaa
     3541 ccttgtgtct taagcggttt tgtcatctgc ggcctgacag gcttatactg tctgactaaa
     3601 ggttaactaa cctgatgttt cgcggtgtgg gcgggcatta cggctcgtcg gcgcctgaat
     3661 cctaatttac acgtacctgt agctgtagcg aatgaatact gaagccacgc acgaccaaaa
     3721 tgaagcacaa accaccggcg ttcgtctgcg caatgcccgt gaacaactcg gactcagcca
     3781 gcaggctgtc gctgagcgac tttgcctgaa ggtttctacg gtacgcgata ttgaagaaga
     3841 taaggcgccg tccgatcttg cttcaacctt cctgcgcgga tatatccgct catatgcgcg
     3901 tctggtgcat gttccagaag aggaactgct gccggggctg gaaaaacaag ctccgctgcg
     3961 cgccgctaaa gtcgccccga tgcagagttt ctcattagga aagcgtcgta aaaaacgcga
     4021 cggctggtta atgtctttta cctggctggt actgtttgtg gtcgtagggc tgaccggcgc
     4081 ctggtggtgg cagaaccaca aggcgcagca ggaagagatc acgacaatgg ccgatcaaag
     4141 cacggctgaa ctgaacgcag ataaagacag cggccaaagc gtaccgctgg acaccagtgc
     4201 cgcgacaagc caggatacga cgccagcgca aacggctccg gctcctgcga cgccggttga
     4261 ttcgacggcg gcaacgcaaa
//
LOCUS       DAGWFR010000256         4268 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.259, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000256 DAGWFR010000000
VERSION     DAGWFR010000256.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4268)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4268)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4268
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.259"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            1..651
                     /gene="alkB"
                     /locus_tag="MOX77_004393"
     CDS             1..651
                     /gene="alkB"
                     /locus_tag="MOX77_004393"
                     /EC_number="1.14.11.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA oxidative demethylase AlkB"
                     /protein_id="HCA3359772.1"
                     /translation="MLDLFADEAPWQEPLAPGAVVLRRFAFRAAQSLLDDIGFVASQS
                     PFRQMVTPGGYTMSVAMTNCGALGWTTDGHGYCYAVRDPLTDKPWPALPLSFASVCRQ
                     AAIAAGYASFQPDACLINRYAPGAKLSLHQDKDEPDLRAPIVSVSLGVPAVFQFGGLR
                     RSDPLQRILLEHGDIVVWGGESRLFYHGIQPLKAGFHPMTGEFRYNLTFRQAAEKE"
     gene            727..2370
                     /locus_tag="MOX77_004394"
     CDS             727..2370
                     /locus_tag="MOX77_004394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug ABC transporter permease/ATP-binding
                     protein"
                     /protein_id="HCA3359773.1"
                     /translation="MELLILVWRQYRWPFISVMALSLASAALGIGLIAFINQRLIETV
                     DTTVMVLPEFLGLLLLLMVVTLGSQLALTALGHHFVYRLRSEFIKRILDTHVERIEQL
                     GSASLLAGLTSDIRNITIAFVRLPELVQGIVLTVGSAAYLAMLSTKMLLVTAIWMAVT
                     IWGGFVLVARVYQHMATLRETEDKLYNDYQTVLEGRKELTLNRERAEQIFQQCYTPDA
                     KEYRHHIIRADTFHLSAVNWSNIMMLGAIGLVFWMANSLGWADTNVAATYSLTLLFLR
                     TPLLSAVGALPTLLTAQVAFNKLNKFALAPYKPDFPQPKAFPDWKTLELRNVVFHYQD
                     NAFSVGPINLTIHRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGTILLDGQPVAAGQP
                     EDYRKLFSAVFTDVWLFDRLLGPQGKPANPALVEKWLEHLKMTHKLELNDGCILNLKL
                     SKGQKKRIALLLALAEERDIILLDEWAADQDPHFRREFYQVLLPLMQEMGKTIFAISH
                     DDHYFIHADRLLEMRNGQLTELTGDERDAASRDAVARTA"
     gene            complement(2579..3073)
                     /gene="eco"
                     /locus_tag="MOX77_004395"
     CDS             complement(2579..3073)
                     /gene="eco"
                     /locus_tag="MOX77_004395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease inhibitor ecotin"
                     /protein_id="HCA3359774.1"
                     /translation="MKMFVPAVVFAALASASAWANNGDTAQPLEKIAPYPQAEKGMKR
                     QVITLTPQQDESTLKVELLIGQTLNVDCNQHRLGGTLETKTLEGWGYDYYVFDNVTSP
                     VSTMMACPEGKKEQKFVTAWLGEDGMLRYNSKLPIVVYTPANVDVKYRIWKADANVQN
                     AIAR"
     gene            3487..3978
                     /gene="napF"
                     /locus_tag="MOX77_004396"
     CDS             3487..3978
                     /gene="napF"
                     /locus_tag="MOX77_004396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-type protein NapF"
                     /protein_id="HCA3359775.1"
                     /translation="MVDLSRRSMLTGSWRNASNGILPPWARETTYFLAHCLRCDACIQ
                     ACEADILQRGTGGYPSVNFKRGECSFCYACAQACPESLFLPRRTRAWDLIFTLTENCL
                     ARQSVECHRCLDSCEPMAITFRPTLSGIYQPQLDSQACNGCGACVAICPVSAIKAENH
                     HAH"
     gene            3968..4231
                     /gene="napD"
                     /locus_tag="MOX77_004397"
     CDS             3968..4231
                     /gene="napD"
                     /locus_tag="MOX77_004397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperone NapD"
                     /protein_id="HCA3359776.1"
                     /translation="MRTNWQVCSLVVQAKSQNIAAIGTQLNTLPGCEVALSDVESGQL
                     IVVAEADQSETLMQTIESVRNVEGVLAVSLVYHQQDEQGEETP"
BASE COUNT          901 a         1097 c         1194 g         1076 t
ORIGIN      
        1 atgctggatc tgtttgctga tgaagcgccc tggcaagagc ccctggcgcc tggcgcggtg
       61 gtgttgcgcc gctttgcgtt tcgcgcggcg cagtcgctat tagacgatat cggatttgtc
      121 gccagtcagt caccgtttcg tcagatggtg acgccgggcg gctacactat gtcggtggcg
      181 atgaccaact gcggcgcgtt agggtggacc accgatggtc acggttattg ttatgccgtg
      241 cgcgatccgt tgaccgataa accctggcct gcgctgccgt tatcgtttgc cagcgtatgt
      301 cgtcaggcgg caatcgcggc agggtatgct agcttccaac cggacgcctg cctgatcaat
      361 cgctacgcgc ctggcgcaaa actgtcgctg catcaggata aagacgagcc ggatctgcgc
      421 gcgcctatcg tctcagtttc gttgggggtg ccggcggttt ttcagtttgg cggcctgcgt
      481 cgcagcgatc cgctccagcg gatcttactg gagcatggcg atatcgtggt ctggggcggc
      541 gagtcccgcc tgttttatca cggtatccag ccgcttaaag cgggctttca tcccatgacc
      601 ggtgaatttc gttacaatct caccttccgt caggcggctg aaaaagaata aaaataagaa
      661 ttattattgc tgtgcaggta gagttagtta aactgcgggc tgttattatc ggtccgggtt
      721 gtatgcatgg aacttcttat tcttgtctgg cggcagtacc gctggccatt tattagcgtg
      781 atggcgctga gcctcgccag cgcggcgctg gggattggcc tgatcgcgtt tatcaatcag
      841 cgcctgattg aaacggtgga caccaccgtc atggtgctgc cggaatttct cggtctgctc
      901 ctgttgctaa tggttgtcac attaggttcc caactggcgc tcaccgctct gggacaccat
      961 ttcgtttacc gcctgcgcag cgaatttatc aagcgcattc tggatacgca cgttgaacgc
     1021 attgagcaac tgggcagcgc ctctttactg gccggtctga ccagcgatat tcgcaatatt
     1081 actatcgcct ttgtgcgtct gcctgagctg gtgcagggca ttgtcctcac cgtcggctcg
     1141 gcggcgtatc tggcgatgct atcgacaaaa atgctgctgg ttacggctat ctggatggcg
     1201 gtcactatct ggggcggatt cgtgctggtg gcgcgggttt accagcatat ggcgaccctg
     1261 cgcgagaccg aagataagct gtacaacgac tatcagacgg tgctggaggg acgcaaagag
     1321 ctgacgctaa accgcgagcg tgcggagcag atttttcagc aatgctatac cccggacgcc
     1381 aaagagtacc gtcatcacat tatccgtgcc gatacttttc acctgagcgc cgtcaactgg
     1441 tcgaatatca tgatgctggg ggcgataggc ctggtcttct ggatggcgaa tagtctcggc
     1501 tgggcggata ccaacgtcgc ggcgacctat tcactgacgt tgctgttcct gcgcacgccg
     1561 ctgctgtctg cggtgggggc gttgccaacg ctactgaccg cccaggtggc gtttaataaa
     1621 ctgaataaat tcgcgctcgc cccgtataag cctgattttc cacagccgaa agcctttccc
     1681 gactggaaga cgctggagct gcgcaacgtg gtttttcact atcaggataa cgcgttttcc
     1741 gtggggccca tcaacctgac gattcaccgc ggcgaactgc tgtttttaat tggcggcaac
     1801 ggtagcggga aatcgacgct ggccatgtta ttgaccggtt tataccagcc gcaatcggga
     1861 acgattttac ttgacggtca acctgttgcc gccgggcagc cggaagatta tcgcaaactg
     1921 ttttctgcgg tgttcaccga tgtgtggtta ttcgaccgcc tgctggggcc gcaggggaaa
     1981 cccgccaatc ccgcgctggt cgaaaagtgg cttgagcacc tgaaaatgac gcacaagctg
     2041 gagctaaacg atgggtgcat cttgaatctt aaactgtcga aagggcaaaa aaagcgcatt
     2101 gcgctgctgc tggcgctggc ggaagagcgc gatattattt tgctggatga gtgggccgcc
     2161 gatcaggacc cgcatttccg ccgggaattt tatcaggtac tgttgccgtt aatgcaggaa
     2221 atgggcaaaa ccattttcgc catcagccat gatgatcact attttattca cgccgatcgc
     2281 ctgcttgaaa tgcgtaacgg gcagttaacc gaactcaccg gcgacgaacg tgacgccgct
     2341 tcgcgtgatg cggttgcgcg tactgcgtaa tggactatgg cgccggataa actgcctgat
     2401 ggcagcccta cgtccgcacg cgggtaggcc tgataagatg ccacgcgtcg ccaccaggca
     2461 tcggggtatt ttttgcggcg ggcgagcggg tttccagacg tgttttaaaa agaaccccgg
     2521 agcgctgcgt gagtcggcgt gttcagatgc ccggtaagtg tgaccgggca gcgtaacatt
     2581 atcgcgcgat ggcattctgt acgttagcgt ccgctttcca gatgcggtat ttcacgtcca
     2641 cattcgccgg ggtatacacc acgatcggca gcttgctgtt gtagcgcagc atcccgtctt
     2701 cacccagcca ggcggtgacg aatttttgct ctttcttacc ttcagggcag gccatcatgg
     2761 ttgataccgg agaggtgacg ttatcaaaga cataatagtc gtagccccag ccttccagcg
     2821 tttttgtttc cagcgtgccg ccgaggcgat gctggttaca atccacattc agcgtttgac
     2881 caatcaacag ttccactttg agggtagatt catcctgctg aggggtaagg gttatcactt
     2941 gccgcttcat tcctttctcc gcctgcggat agggggcgat tttttccagc ggctgggcgg
     3001 tatcgccatt gttagcccag gcagaggcgc tggcgagggc ggcgaagacg acggcaggga
     3061 caaacatctt catttgattg ttcacagtat ttcctttctg ctgttttcgg tatgcacaga
     3121 caacagatta acacattcat attatctatt aatctgtatt tactcatatt ttcaagatta
     3181 ttaataaaat aacgtctttt tatatagtgg aatattctga tattgataat gtaaatgaaa
     3241 ttatcagcta ttagtgattt ccgttatata aatatctata taactcattg aaatgtgaga
     3301 aaaagcacgt ttacgggtct ttacccggca ctcttttgat ccggcaacag catttacctc
     3361 tatcggggta tgcatctctt acacatcctg aaatatctta tttacaaaaa taactactca
     3421 taaattgtac ggtttttatt ggcattcact ccctatggaa gcgtgtcgtt atggaagggc
     3481 gatatcatgg ttgatttatc ccgtcgaagc atgttgaccg gcagttggcg caacgccagc
     3541 aatgggattc ttccgccgtg ggccagagaa acgacctatt ttctcgcaca ttgtctgcgt
     3601 tgcgacgcct gcatccaggc gtgtgaggcc gacatcctgc agcgagggac ggggggatat
     3661 ccgagcgtaa atttcaaacg gggcgagtgc agcttttgtt atgcctgtgc gcaggcctgt
     3721 cccgaatctc tctttcttcc gcgccgcacc agggcctggg atctgatttt tacactcacg
     3781 gaaaactgcc tcgccaggca gtcggttgaa tgccatcgtt gcctggacag ttgtgaacct
     3841 atggccatta cctttcgtcc cacgttatcc ggtatttacc agccgcagct tgactcgcag
     3901 gcctgtaacg gatgcggggc gtgtgtggct atctgtcccg tgtcagccat caaagcggag
     3961 aaccaccatg cgcactaact ggcaggtctg tagcctggtc gtgcaggcca aaagtcagaa
     4021 catcgccgcc attggcacac agttgaacac gttgccgggt tgcgaagtcg cgttaagcga
     4081 cgttgaaagc gggcaactga tcgtggtggc ggaagcagac cagagtgaaa cgctgatgca
     4141 aacaattgag tcagtacgca atgtcgaggg cgtgctggcg gtgtcgctgg tttatcacca
     4201 gcaggatgag caaggtgagg aaacaccatg aaactcagtc gtcgtagctt tatgaaagct
     4261 aacgccgc
//
LOCUS       DAGWFR010000257         4236 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.260, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000257 DAGWFR010000000
VERSION     DAGWFR010000257.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4236)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4236)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4236
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.260"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..368)
                     /locus_tag="MOX77_004398"
     CDS             complement(<1..368)
                     /locus_tag="MOX77_004398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HCA3359777.1"
                     /translation="MKKVAIVGALLVLAGCAEVENYNDVVKTPAPAGLEGYWQSKGPQ
                     RKLVSPEAIASLVVTKEGDTLDCRQWQRVIALPGKLTMLSDDLTNVTVKRELYEIERD
                     GNTLEYDGMTLQRVARPTPE"
     gene            575..1780
                     /gene="yedE"
                     /locus_tag="MOX77_004399"
     CDS             575..1780
                     /gene="yedE"
                     /locus_tag="MOX77_004399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016156840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenium metabolism membrane protein YedE/FdhT"
                     /protein_id="HCA3359778.1"
                     /translation="MSWQHFKQTWLIKFWAPAPAVIAAGILSTYYFGITGTFWAVTGE
                     FTRWGGQILQLFGVHAEQWGYYKLIHLEGTPLTRIDGMMILGMFGGCFAAALWANNVK
                     LRMPRSRIRIVQAVVGGMIAGFGARLAMGCNLAAFFTGIPQFSLHAWFFALATAIGSW
                     FGARFTLLPIFRIPVKMQKVSAASPLTQKPDQARRRFRLGMLVFIGMIGWALLTAMHQ
                     PKLGLAMLFGVGFGLLIERAQICFTSAFRDLWISGRAHMAKAIIFGMAVSAIGIFSYV
                     QLGVAPKIMWAGPNAVIGGLLFGFGIVLAGGCETGWMYRAVEVQVHYWWVGLGNVIGS
                     TILAYYWDDFAPALATSWDKVNLLNTFGPLGGLLVTYLLLFTALMLIIGWEKRFFRRA
                     GLTPAKESV"
     gene            1777..2010
                     /gene="yedF"
                     /locus_tag="MOX77_004400"
     CDS             1777..2010
                     /gene="yedF"
                     /locus_tag="MOX77_004400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase-like selenium metabolism
                     protein YedF"
                     /protein_id="HCA3359779.1"
                     /translation="MKNIVPDYRLDMVGEPCPYPAVATLEAMPQLKKGEILEVVSDCP
                     QSINNIPLDARNHGYTVLDIQQDGPTIRYLIQK"
     gene            2275..2661
                     /locus_tag="MOX77_004401"
     CDS             2275..2661
                     /locus_tag="MOX77_004401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_448379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3359780.1"
                     /translation="MIYLCTAEAKKMIKIIFISIIGVVCLAAARYSPVTVVNAHPSAI
                     ARCLADNLSPYGYILDLHETDIPGISKEFTVYYRNGAYIAGTFWIANSMTIASELIVG
                     MNGVSKQAYPIFNKSLQQCATRLSIK"
     gene            complement(2781..3095)
                     /gene="fliE"
                     /locus_tag="MOX77_004402"
     CDS             complement(2781..3095)
                     /gene="fliE"
                     /locus_tag="MOX77_004402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein FliE"
                     /protein_id="HCA3359781.1"
                     /translation="MAAIQGIEGGISQLQATAMAANGQETHSQSTVSFAGQLHAALDR
                     ISDRQTAARVQAEKFTLGEPGIALNDVMADMQKASVSMQMGIQVRNKLVAAYQEVMSM
                     QV"
     gene            3312..>4236
                     /gene="fliF"
                     /locus_tag="MOX77_004403"
     CDS             3312..>4236
                     /gene="fliF"
                     /locus_tag="MOX77_004403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar M-ring protein FliF"
                     /protein_id="HCA3359782.1"
                     /translation="MSATASTATQPKPLEWLNRLRANPRIPLIVAGSAAVAIVVAMVL
                     WAKTPDYRTLFSNLSDQDGGAIVAQLTQMNIPYRFANGSGAIEVPADKVHELRLRLAQ
                     QGLPKGGAVGFELLDQEKFGISQFSEQVNYQRALEGELARTIETLGPVKSARVHLAMP
                     KPSLFVREQKSPSASVTVTLEPGRALDEGQISAVVHLVSSAVAGLPPGNVTLVDQSGH
                     LLTQSNTSGRDLNDAQLKFANDVESRIQRRIEAILSPIVGNGNVHAQVTAQLDFANKE
                     QTEEHYSPNGDASKATLRSRQLNISEQVGAGY"
BASE COUNT          968 a         1128 c         1101 g         1039 t
ORIGIN      
        1 cactccggcg tcggacgagc gacccgttgc agcgtcatgc catcatattc cagggtattc
       61 ccgtcgcgct caatctcata gagctcacgc ttaaccgtaa cattggttaa gtcatcggag
      121 agcatggtca gcttgcccgg cagagcaata acgcgctgcc actggcggca gtccagcgta
      181 tcgccttctt tagtcaccac caggctggcg atagcttcag ggctcaccag cttacgttgc
      241 gggccttttg actgccagta cccttccaga ccggccggcg cgggcgtttt caccacatca
      301 ttatagtttt ccacctcggc gcatccggcc agaaccagca atgcgccaac gatcgctact
      361 tttttcatca ttcatcctgc atcagaagaa agaagaaaga agaaagaaga aagaagaatt
      421 gtggcattaa agccctgacg ccgccagcct ttccaggcgc tggccgcaat ttgatccagt
      481 cggtattacc gcttattagg tgtaggcaaa ttctgtgatc ggtgtagtat gcgcacttct
      541 tgtttcacac cttctgagtt cagaggctaa acacatgtca tggcaacact tcaagcaaac
      601 ctggttaatt aaattctggg cgccggcccc tgcggtgatc gcagccggta ttctctctac
      661 ctactatttt ggcatcaccg gcacgttttg ggccgtgacg ggcgaattta cccgctgggg
      721 cgggcaaatt ttgcagcttt ttggcgttca tgccgaacag tggggctact acaagctgat
      781 tcatctggaa ggtacgccgc tgacgcgtat cgacggcatg atgatcctcg gcatgttcgg
      841 cggctgtttc gccgcggcgc tgtgggccaa caacgtaaaa ctgcgtatgc cgcgcagccg
      901 aatccgtatc gtacaggcgg tggtcggagg catgatcgct ggcttcggcg cgcgtctggc
      961 gatggggtgt aacctggccg ccttttttac cgggatcccg cagttctccc tacacgcgtg
     1021 gttctttgcg ctggcgaccg ctatcggttc ctggttcggc gcccgcttta cgttgctgcc
     1081 gatatttcgc ataccggtga aaatgcaaaa ggtctccgcg gcttcgccac tgacgcagaa
     1141 accggatcag gcaagacggc gtttcaggct cggtatgctg gtctttatcg gcatgattgg
     1201 ctgggcgtta ttaacggcaa tgcatcagcc gaaactgggg ctggcgatgc tgttcggcgt
     1261 cgggtttggg ctgctgatcg agcgcgcgca aatctgcttt acctcggcct ttcgcgatct
     1321 gtggatctcc ggacgcgccc atatggcgaa agcgattatt tttggcatgg cggtcagcgc
     1381 cattggtatt ttcagctacg tgcagttggg cgttgcacct aaaattatgt gggctggccc
     1441 gaatgcggtc attggcggac tgctgttcgg ttttggcatc gtgctggcgg gcggctgcga
     1501 aaccggctgg atgtaccgcg ccgtagaagt ccaggtgcat tactggtggg tgggcctcgg
     1561 caatgtcatc ggttcgacca tcctggctta ctactgggat gatttcgcgc ccgcgctggc
     1621 gaccagttgg gataaagtta acctgctgaa tacctttggt ccgctggggg gtctgctggt
     1681 cacctatctg ttgttattta ccgcgctgat gttaatcatc ggctgggaaa aacgtttttt
     1741 ccgccgtgcg gggctgacgc ctgctaagga atctgtatga aaaatatcgt ccctgattac
     1801 cgtctggata tggttggcga accttgcccg tacccggcgg tcgccactct ggaagcgatg
     1861 ccgcagctaa aaaaaggtga gatcctggaa gtggtcagcg actgtccgca gtccattaat
     1921 aatattccac tggatgcgcg caatcacggt tatacggtgc tggatattca gcaggatggc
     1981 ccgacaattc gttatctgat tcaaaaataa gcgcatactc ccgctgtacg ttacggcggg
     2041 agacctttta cggcataacc ggcaaaaatc taaaacgcat aaaagaaatc agacaaggtc
     2101 gtcttgtgcg ccgtggcata aatctattat ataacgtata ccgttttaat tttgtctgag
     2161 ccgatgaaaa aaccatgact attttaagca aaacataaaa taattattat tttccctcta
     2221 cgtcataaaa gactatcagg tatttatatt tttactcact gacattatca ggtgatgatt
     2281 tatttatgca cagcagaagc caaaaaaatg ataaaaatta ttttcatctc cattattgga
     2341 gtcgtctgtc ttgccgctgc ccgttactca cccgtcacag tagtcaatgc acatccgagc
     2401 gccattgccc gctgtctcgc tgataatctg tccccgtatg ggtatatact ggatctccat
     2461 gaaacagata ttccaggtat tagtaaagaa tttaccgtgt attatcgcaa cggcgcatat
     2521 attgcaggaa cattctggat tgcaaactca atgacaatag cctcagaact aatagtagga
     2581 atgaatggcg tcagtaaaca ggcgtaccct atttttaata agtccctgca acaatgtgca
     2641 acccgcttat caataaaatg agcgcgcctc gcaaaaacaa gcccacataa tcacgcactg
     2701 gttgcatggg cgtcgcgtcc cccgccactg acttaggtaa gcgcccggga gttcgctgcg
     2761 gatgtgttgt cagccctggc ttaaacctgc atggacatga cttcctgata cgcggcgacc
     2821 agcttattgc gcacctgaat ccccatttgc atagagacgg acgctttttg catatcagcc
     2881 atcacgtcat taagcgcaat gcccggctca cccagagtga atttttccgc ctgaacgcgc
     2941 gccgccgttt gtctgtcgct aatacgatcc agcgcagcat gtagctggcc ggcaaaactc
     3001 accgtcgact gcgagtgtgt ttcttgcccg tttgcggcca tcgccgtcgc ctgtaactgg
     3061 ctaatacccc cttcaatccc ctgtattgct gccatgttat tcccctggat gattttttac
     3121 gcagcagaga ttaccagttt gtcaataaga taaaggcgtt aaataacgat aaaaaacctc
     3181 ggtttttagc gcatagaaaa attcgaaacc acaaataatg agaccgtcaa tttttcgagt
     3241 ttgctgaccc gggagtgagt cttgttccac tttgcaaaaa acgccgtcca cgatcagtca
     3301 cgaggtgcga gatgagtgcg actgcatcga ctgcaaccca acctaaacct ctcgagtggc
     3361 ttaatcgcct acgcgcgaat ccccgaattc cgttaattgt ggcgggttcc gccgccgtgg
     3421 cgatcgtcgt tgcgatggtg ctgtgggcca aaacgcccga ttaccgcacg ctatttagca
     3481 acctttccga tcaggacggc ggcgcgatcg tcgcgcagtt gacccagatg aatatcccct
     3541 atcgctttgc caatggcagc ggcgcgattg aagtgcccgc cgacaaagtg catgaactgc
     3601 gtctgcgtct ggcgcagcag gggctgccta aaggcggcgc ggtaggcttt gaactgcttg
     3661 atcaggaaaa attcggtatc agtcagttca gcgagcaggt gaattatcag cgcgcgctgg
     3721 aaggtgaact ggcccggacg atcgagacgc tgggtccggt aaaaagcgcc cgcgttcacc
     3781 tggcgatgcc aaagccgtcg ctatttgtgc gggaacaaaa atccccttcc gcctccgtca
     3841 ccgtcacact ggaaccgggc cgggcgctgg atgaaggaca aattagcgcc gtggtacatc
     3901 tggtttccag cgctgtcgcc ggtttgccgc caggaaacgt cactctggtc gatcaatccg
     3961 gtcatctgct cacgcaatcc aataccagcg gtcgcgacct taatgacgcg caattaaaat
     4021 ttgctaatga tgtggaaagc cgcatccaac gccgtatcga agccattctg tcgcctatcg
     4081 tcgggaacgg taatgttcac gctcaggtaa ccgcccagtt ggattttgcc aataaagaac
     4141 agacggaaga gcactacagc ccgaacggcg atgcgtcgaa ggccactctg cgttcacgtc
     4201 agttgaatat tagcgaacag gtaggcgcgg gctatc
//
LOCUS       DAGWFR010000258         4212 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.261, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000258 DAGWFR010000000
VERSION     DAGWFR010000258.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4212)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4212)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4212
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.261"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..246
                     /gene="prpB"
                     /locus_tag="MOX77_004404"
     CDS             <1..246
                     /gene="prpB"
                     /locus_tag="MOX77_004404"
                     /EC_number="4.1.3.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459363.1"
                     /note="catalyzes the formation of pyruvate and succinate
                     from 2-methylisocitrate; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylisocitrate lyase"
                     /protein_id="HCA3359783.1"
                     /translation="GATPLFTTDELRSAHVAMALYPLSAFRAMNRAAEKVYTVLRQEG
                     TQKNVIDIMQTRNELYESINYYQFEEKLDALYRNKKS"
     gene            369..1538
                     /gene="prpC"
                     /locus_tag="MOX77_004405"
     CDS             369..1538
                     /gene="prpC"
                     /locus_tag="MOX77_004405"
                     /EC_number="2.3.3.16"
                     /EC_number="2.3.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylcitrate synthase"
                     /protein_id="HCA3359784.1"
                     /translation="MTDTTILQNNTHVIKPKKSVALSGVPAGNTALCTVGKSGNDLHY
                     RGYDILDLAEHCEFEEVAHLLIHGKLPTRDELNAYKSKLKALRGLPANVRTVLEALPA
                     ASHPMDVMRTGVSALGCTLPEKEGHTVSGARDIADKLLASLSSILLYWYHYSHNGERI
                     QPETDDDSIGGHFLHLLHGEKPTQSWEKAMHISLVLYAEHEFNASTFTSRVIAGTGSD
                     VYSAIIGAIGALRGPKHGGANEVSLEIQQRYETPDEAEADIRKRVENKEVVIGFGHPV
                     YTIADPRHQVIKRVAKQLSEEGGSLKMYHIADRLETVMWETKKMFPNLDWFSAVSYNM
                     MGVPTEMFTPLFVIARVTGWAAHIIEQRQDNKIIRPSANYTGPEDRVFVPIEKRC"
     gene            1576..3027
                     /locus_tag="MOX77_004406"
     CDS             1576..3027
                     /locus_tag="MOX77_004406"
                     /EC_number="4.2.1.3"
                     /EC_number="4.2.1.79"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-methylcitrate
                     dehydratase/aconitate hydratase"
                     /protein_id="HCA3359785.1"
                     /translation="MSAHISNVRPDFDREIVDIVDYVMNYEITSKVAYDTAHYCLLDT
                     LGCGLEALEYPACKKLLGPIVPGTVVPNGARVPGTQFQLDPVQAAFNISAMIRWLDFN
                     DTWLAAEWGHPSDNLGGILATADWLSRNAVAAGKAPLTMKQVLSGMIKAHEIQGCIAL
                     ENAFNRVGLDHVLLVKVASTAVVAEMLGLTRDEILNAVSLAWVDGQSLRTYRHAPNTG
                     TRKSWAAGDATSRAVRLALMAKTGEMGYPSALTAKTWGFYDVSFKGETFRFQRPYGSY
                     VMENVLFKISFPAEFHSQTAVEAAMTLYEQMQAAGKTAADIEKVTIRTHEACLRIIDK
                     KGPLNNPADRDHCIQYMVAVPLLFGRLTAADYEDEVAQDKRIDALREKIVCYEDPAFT
                     ADYHDPEKRAIGNAITVEFTDGSRFGEVVVEYPIGHARRRADGIPKLIEKFKINLARQ
                     FPTRQQQRILDVSLDRARLEQMPVNEYLDLYII"
     gene            3068..>4212
                     /locus_tag="MOX77_004407"
     CDS             3068..>4212
                     /locus_tag="MOX77_004407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HCA3359786.1"
                     /translation="MSFSEFYQRSINEPEAFWAEQARRIDWRQPFTQTLDHSRPPFAR
                     WFCGGTTNLCHNAVDRWRDKQPEALALIAVSSETDEERTFTFSQLHDEVNAVAAMLLS
                     LGVQRGDRVLVYMPMIAEAQITLLACARIGAIHSVVFGGFASHSVAARIDDARPALIV
                     SADAGARGGKILPYKKLLDDAIAQAQHQPKHVLLVDRGLAKMSWVDGRDLDFSTLRQQ
                     YLGASVPVAWLESNETSCILYTSGTTGKPKGVQRDVGGYAVALATSMDTIFGGKAGGV
                     FFCASDIGWVVGHSYIVYAPLLAGMATIVYEGLPTYPDCGVWWKIVEKYQVNRMFSAP
                     TAIRVLKKFPTAQIRNHDLSSLEALYLAGEPLDEPTASWVTETLGVPV"
BASE COUNT          939 a         1169 c         1223 g          881 t
ORIGIN      
        1 ggcgcgacgc cgctgtttac gaccgacgag ttgcgcagcg cacacgtggc gatggcgctc
       61 tatccgctgt cggcgtttcg cgccatgaac cgcgccgcag aaaaagtcta taccgtgctg
      121 cgccaggaag ggacgcaaaa gaacgtgatc gacatcatgc agacccgcaa cgagctgtac
      181 gaaagcatca attactacca gttcgaagag aagctggacg cgctgtacag gaataaaaaa
      241 tcgtagcctg tgggcctgat aaggcgaagc cgccatcagg caatgccgga tggcactacg
      301 tttatcccgc ctacggtacg gcctacacgc ctcaataccc tacacattac aataatgacg
      361 aggacaatat gacagacacg acgatcctgc aaaacaacac gcatgtcatt aagcctaaaa
      421 aatcggtcgc gctttccggc gtacctgccg gaaataccgc tctgtgtacc gtgggaaaaa
      481 gcggtaacga tctgcactat cgcggttacg acattctcga tctggcggag cactgcgaat
      541 ttgaagaagt cgcgcattta ctgatccacg gaaaattacc gacccgcgac gagctgaacg
      601 cgtataaaag caagttaaaa gcgctgcgcg gattacccgc caatgtccgt accgttctgg
      661 aagcgttacc ggcggcctcg cacccgatgg acgtgatgcg taccggcgtt tccgcgctgg
      721 gctgcaccct gccggaaaaa gagggacata ccgtctccgg cgcgcgcgat attgccgata
      781 agctgttggc ttcgctcagc tctatccttc tttactggta tcactacagc cacaacggcg
      841 aacgtattca gccggaaacc gacgatgatt ccatcggcgg ccatttcctg catctgctgc
      901 acggtgaaaa gccaacccaa agctgggaaa aggcgatgca tatttcgctg gtgctgtacg
      961 ccgagcatga gttcaacgcc tcgacgttta ccagccgggt aattgccggg accggctcgg
     1021 atgtctactc cgcgattatc ggcgcgattg gcgcgctgcg cggcccgaaa cacggcggag
     1081 cgaatgaggt gtcgctggaa attcaacagc gttatgaaac accggacgag gcagaggcgg
     1141 atatccgtaa acgcgtggaa aacaaagagg tggtgattgg ctttggacat ccggtttaca
     1201 ccatcgccga cccgcgccac caggtgatca aacgggtggc gaaacagctt tcagaagaag
     1261 gcggctcgct gaagatgtac cacatcgccg accgtctgga aacggtgatg tgggagacca
     1321 aaaagatgtt cccgaatctc gactggtttt cggcggtctc ctacaacatg atgggcgtcc
     1381 ctaccgaaat gttcaccccg ctgtttgtca tcgcccgcgt taccggctgg gcggcgcaca
     1441 ttattgaaca gcgtcaggac aacaaaatta ttcgtccttc cgccaattat accggcccgg
     1501 aagatcgcgt atttgtgccg atcgaaaagc gttgctaatt aaaacctcta aatataaaaa
     1561 caggagttgt accctatgtc cgcacatatt tcgaacgttc gcccagactt tgaccgtgaa
     1621 atcgttgata tcgttgatta cgttatgaat tacgagatca cctcaaaggt ggcgtacgac
     1681 actgcgcatt actgcctgct cgacacgctc ggctgtggtc tggaagcgct ggaatacccg
     1741 gcctgtaaaa aattgcttgg gccaatcgtg ccaggcacgg tggtgcccaa cggcgcacgc
     1801 gtgccgggca cccagttcca gctcgatccg gtacaggcag cctttaacat tagcgcgatg
     1861 atccgctggc tcgattttaa cgatacctgg cttgccgccg agtggggcca tccttctgat
     1921 aacctcggcg gtattctggc gacggctgac tggctgtcac gcaacgccgt cgccgccggc
     1981 aaagcgccgc tgaccatgaa acaggtattg agcgggatga tcaaagccca tgaaattcag
     2041 ggctgcatcg cgctggaaaa cgccttcaac cgtgtcgggc ttgaccatgt gctgctggtc
     2101 aaagtggcct cgaccgcggt ggtcgctgaa atgctggggc tgacgcgcga tgagatcctc
     2161 aacgcggtat cgctggcgtg ggtggatggg cagtcgttgc gcacttatcg tcatgcgccg
     2221 aataccggta cgcgcaaatc ctgggcggcg ggcgatgcga cttcgcgcgc ggtacgtctg
     2281 gcgctgatgg cgaaaaccgg cgagatgggc tatccctcgg cgctcaccgc caaaacctgg
     2341 ggcttctacg acgtttcatt caaaggtgaa acgttccgtt tccagcgccc ttacggctcc
     2401 tacgtgatgg aaaacgtgct atttaaaatt tctttcccgg cagaattcca ctcgcaaacc
     2461 gccgtcgaag cggcgatgac actgtatgag cagatgcagg ccgcgggcaa aacggcagcg
     2521 gatatcgaga aagtgactat ccgcacccac gaagcctgtc ttcgcattat cgataaaaaa
     2581 ggcccgctca ataacccggc ggaccgcgat cactgtatcc agtatatggt cgccgtgccg
     2641 ttgctgttcg gacggttaac cgcggcggat tatgaagacg aggtggcgca ggacaagcgt
     2701 attgacgccc tgcgcgagaa aatcgtgtgc tatgaggacc cggcttttac cgccgactat
     2761 cacgacccgg aaaaacgtgc tatcggcaat gcgatcaccg tggagtttac tgatggctca
     2821 cgctttggcg aggttgtcgt ggagtatccg attggtcatg cgcgtcgccg cgccgacggt
     2881 attccgaagc ttatcgaaaa atttaaaatt aacctggcgc gtcagttccc gactcgccag
     2941 cagcaacgca ttctggatgt ctccctggac agagcccgcc tggagcagat gccggttaac
     3001 gaatacctcg atttatatat catctgagcc agccagcagt aaggcgtaag ttcaacagga
     3061 gagcgtgatg tcttttagcg aattttatca gcgttccatt aacgaaccgg aggcgttctg
     3121 ggccgagcag gcccggcgta tcgactggcg acagccgttt acgcagacgc tggatcatag
     3181 ccgtccaccg tttgcccgct ggttttgcgg cggcaccact aacttatgtc ataacgccgt
     3241 cgaccgctgg cgggataaac agccggaggc gctggcgctg attgccgtct catcagagac
     3301 cgatgaagag cgcacattta ccttcagcca gttgcatgat gaagtcaacg ctgtggccgc
     3361 tatgctgctg tcgctgggcg tgcagcgtgg cgatcgcgta ttggtctata tgccgatgat
     3421 tgccgaagcg cagataaccc tgctggcctg tgcgcgcatt ggcgcgatcc attcggtggt
     3481 ctttggcggt tttgcctcgc acagcgtggc ggcgcgcatt gacgatgcca gaccggcgct
     3541 gattgtgtcg gcggatgccg gagcgcgtgg cggtaaaatt ctgccgtata aaaagctgct
     3601 tgatgacgct attgcgcagg cgcagcatca gccgaaacac gttctgctgg tggacagagg
     3661 gctggcgaaa atgtcgtggg tggatgggcg cgatctggat ttttccacgt tgcgccagca
     3721 gtatctcggc gcgagcgtgc cggtggcgtg gctggaatcc aatgaaacct cgtgcattct
     3781 ttacacctcc ggcactaccg gcaaaccgaa aggcgtccag cgcgacgtcg gcggttatgc
     3841 ggtggcgctg gcaacctcga tggacaccat ttttggcggc aaggcgggcg gcgtattctt
     3901 ttgcgcatcg gatatcggct gggtcgtcgg ccactcctat atcgtttacg cgccgctgct
     3961 ggcaggcatg gcgactattg tttacgaagg actgccgacg tacccggact gcggggtctg
     4021 gtggaaaatt gtcgagaaat accaggttaa ccggatgttt tccgccccga ccgcgattcg
     4081 cgtgctgaaa aaattcccga cggcgcaaat ccgcaatcac gatctctcct cgctggaggc
     4141 gctttatctg gccggtgagc cgctggacga gccgacggcc agttgggtga cggagacgct
     4201 gggcgtaccg gt
//
LOCUS       DAGWFR010000259         4196 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.262, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000259 DAGWFR010000000
VERSION     DAGWFR010000259.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4196)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4196)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4196
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.262"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..516
                     /locus_tag="MOX77_004408"
     CDS             <1..516
                     /locus_tag="MOX77_004408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HCA3359787.1"
                     /translation="LTSGIALLNPEVYDQLRFWQAGSLDIRSLQTLKVALAPVVIAGI
                     VALFLSRALNSLSLGSDTATALGSKVARTQLIGLLAITVLCGSATALVGPIAFIGLMM
                     PHMARWLVGADHRWSLPVTLLATPALLLFADIIGRLLVPGELRVSVVSAFIGAPVLIF
                     LVRRKSSGGGL"
     gene            516..1505
                     /gene="fepG"
                     /locus_tag="MOX77_004409"
     CDS             516..1505
                     /gene="fepG"
                     /locus_tag="MOX77_004409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-enterobactin ABC transporter permease"
                     /protein_id="HCA3359788.1"
                     /translation="MFLSRRLIVSCLLLAAGCFAIGLWSLQSGAVPLETGQIIAALLG
                     DAPRNITLVVTEWRLPRVLMALLIGAALGVSGAIFQSLMRNPLGSPDVMGFNTGAWSG
                     VLVAMVLFGQHLTAIALAAMAGGIVTSLIVWLLAWRNGIETFRLIIIGIGIRAMLVAF
                     NTWLLLQASLETALTAGLWNAGSLNGLTWAKTWPSAPLIMVMLTGAALLVRRMRLLEM
                     GDDSACALGVSVERSRLMLMLVAVSLTAAATALAGPISFIALVAPHIARRLSGTARWG
                     LTQSALCGALLLLAADACAQQLFMPYQLPVGVVTVSLGGIYLIVLLIQESRKK"
     gene            1502..2296
                     /gene="fepC"
                     /locus_tag="MOX77_004410"
     CDS             1502..2296
                     /gene="fepC"
                     /locus_tag="MOX77_004410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-enterobactin ABC transporter ATP-binding
                     protein"
                     /protein_id="HCA3359789.1"
                     /translation="MTESVARLRGDQLTLGYGSYTVAKNLNVSIPDGHFTAIIGPNGC
                     GKSTLLRTLSRLMTPVDGHVWLDGEQIQRYASKEVARRIGLLAQNATTPGDITVQELV
                     ARGRYPHQPLFTRWRKEDADAVASAMRATGITSLAAQSVDTLSGGQRQRAWIAMVLAQ
                     ETSIMLLDEPTTWLDISHQIDLLELLSDLNREKGYTLAAVLHDLNQACRYATHLIALR
                     EGNIVAQGAPKEIVTAELIEKIYGLRCMIIDDPVAGTPLVVPLGRR"
     gene            complement(2349..3485)
                     /gene="fepE"
                     /locus_tag="MOX77_004411"
                     /pseudo
     CDS             complement(2349..3485)
                     /gene="fepE"
                     /locus_tag="MOX77_004411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459581.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LPS O-antigen length regulator"
     gene            complement(3735..>4196)
                     /locus_tag="MOX77_004412"
     CDS             complement(3735..>4196)
                     /locus_tag="MOX77_004412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3359790.1"
                     /translation="GTLAQGIAARLRARGETVAFLGLLDTWPPETQNWRGKEANGLNP
                     DVLAEIERERAAFVAAQQGNASDALFTAIEGNYADAVRLLTTAHSAPFDGHATLFVAD
                     KTVPEDVSPEQSWSPWIASLAIYRQPCAHVDIISPSAFETIGPIISELINK"
BASE COUNT          897 a         1161 c         1126 g         1012 t
ORIGIN      
        1 ctaaccagcg gcatcgcgtt gttaaatcca gaggtctatg accagcttcg cttctggcag
       61 gcgggatcgc tggacattcg tagcctgcaa acgttgaaag tcgcgctcgc gcccgtggtt
      121 atcgctggga tcgtggcgct atttctgagc cgagcgctga acagcctgag cctcggcagc
      181 gataccgcga cggcgctggg gagtaaagtg gcgcgcaccc aacttattgg tttactggcg
      241 attaccgtct tgtgcggcag cgcaacggcg ctggtcggcc ctatcgcctt tattggtctg
      301 atgatgccgc atatggcgcg ttggctggtg ggcgcagacc accgttggtc gctgccggta
      361 acactactgg caacccctgc tctgctgctt tttgccgata ttattggtcg tctgttagtg
      421 ccgggcgaac tccgcgtatc ggtcgtcagt gcgtttatcg gcgcgccggt acttatcttt
      481 ctggtacgcc gtaaatcgag cggaggcggc ctgtgatgtt tctttctcgt cggcttatcg
      541 taagctgcct gcttctggcg gctggctgct tcgccattgg cttatggagc ctgcaaagcg
      601 gcgccgtgcc ccttgagacc gggcagatta ttgccgcgct gctgggcgac gcgccgcgta
      661 atatcaccct tgtcgtaacc gaatggcgac taccgcgcgt attaatggcg ctactgattg
      721 gcgctgcgct tggcgtcagt ggcgcgattt ttcagtcgtt gatgcgtaac ccgctaggca
      781 gccctgatgt gatgggcttt aataccggcg cctggagcgg cgtactggtc gcaatggtcc
      841 tgtttggcca gcatcttacc gcgatcgcgc tggcggcaat ggcgggcggt atcgtcacgt
      901 cattgattgt ctggctgctc gcctggcgta acgggattga aactttccgg ctgattatca
      961 tcggtatcgg catccgcgcg atgttagtcg cctttaatac ctggcttctg ttgcaggcgt
     1021 cgctggaaac ggcgctcacc gccggcttat ggaacgccgg gtcgctcaac ggtctgacat
     1081 gggcaaaaac ctggccttcg gcgccgctga ttatggtgat gctgacaggc gccgcgctac
     1141 tggtgcgtcg tatgcggctg ctggagatgg gcgatgacag cgcctgcgcg ctgggtgtta
     1201 gcgtggagcg gtcacgcctg atgctgatgc tggtggcggt gtcgctcacc gctgctgcaa
     1261 cggcactggc tggccccatc tcgtttattg cccttgtcgc gccgcacatc gcccgtcgtc
     1321 ttagcggcac agcgcgctgg ggattaaccc agtcggcgct gtgcggcgcg ttattactac
     1381 tggccgccga tgcgtgcgcg cagcaactgt ttatgcctta tcagcttcca gtgggcgtgg
     1441 tcaccgtcag cctcggcggt atttacctta tcgtcttgtt aattcaggag tcccgcaaaa
     1501 aatgaccgaa tccgtagccc gtttgcgcgg cgaccagtta acgctgggtt atggcagcta
     1561 taccgtcgca aaaaacctta atgtttcgat tccggacggc cattttaccg ccatcatcgg
     1621 ccctaacggc tgcggcaagt cgacgttgct acgtacgcta agccgtctga tgacgcctgt
     1681 tgacggccat gtctggctgg atggcgaaca aatacagcgt tacgccagta aagaggtggc
     1741 gcggcgcatc ggattgctgg cgcaaaacgc caccacgccg ggcgatatca ccgtacaaga
     1801 actggtcgcc agagggcgtt atccgcatca gccgttattt acccgctggc gcaaggaaga
     1861 tgccgacgcc gtcgccagtg ctatgcgtgc aacaggtatc acctcactgg cggcgcaaag
     1921 cgtagacacg ctgtccggcg gccaacgtca gcgggcgtgg atagccatgg tgctggcgca
     1981 ggaaacgtcc atcatgctgc tggatgagcc gacaacgtgg ctggatatta gccatcaaat
     2041 tgatttgttg gaattgttaa gcgatctcaa ccgtgaaaaa ggctatacgc tagccgccgt
     2101 cctgcacgac ctgaatcagg cctgccgata cgccacacat ttgattgcat tacgcgaagg
     2161 taacattgtc gcacagggcg cgccgaaaga gattgttacc gctgagctta tcgaaaaaat
     2221 ctatgggctg cgctgtatga ttatcgacga tccggttgcc gggacgccgc tggtggtacc
     2281 gctggggcgg cgatagtcgc ccacacagat gacaaagccg gatatcgcta tccggctttt
     2341 cgggtaaatc agactaaccg ttcatctatc gccagcgcgt tttccatttt acgcgagacc
     2401 atcgcgtgac gcagtaatac gccgccgcag gccatcatac cgccaatcaa cgccgccagg
     2461 ataataatga tcgctttacc cgggccatct tttttcactg gcagagacgg cgacagttga
     2521 tatttaaacg gggtaaactt cacgtcgctc acattcattg ccgccagttg ttcaacatag
     2581 tattgacggt tacgcaaatc accgtcgatc tcggccacgt ccgttacccc tttttcaatt
     2641 tccagtttgc gggaaatacc atccgcgccg agggaaatag aaaaatccgg atcatctttt
     2701 accgcctgac cattactgta aaccggtctc ttaatgccag cggcgttggc gatttccagc
     2761 gaataatgaa gacgttgaat attggcatca agctgatttt tgagacgcac ccgatccatc
     2821 gccagctttt cctgctcgta gcgggttttg atttccagct ggttacgaat attttccagc
     2881 gtctctttca cgacgatatc ggagatgtac tgaatatagc cagccaacac tttttgcgct
     2941 tcttcccgcg tcggcgcggt aaaactcagc gtccacgacg tgaataacga cgtttcattt
     3001 ttcttgccgg cattgctgtc caccgctttc attttttcgc tcagcacgac aatcgcccgg
     3061 tgaagatcct gctcgtctat ttgcgcgcct tttaattgat ccatgacata cggagaagaa
     3121 cgaagatatt cttccagcag cgagggcgag ctaaactttt taataaacag attaaatacg
     3181 ctggcccgat caacgcttac ctccatatcc aacacgcgca gcgcggtcaa cgttctctcc
     3241 agcccctgct actgtaccga ctccgccggt gtgacaatcg cctggctggt ccatttttgc
     3301 ggcagcagaa aggacagaag caaccccacg cacgcaaagg cgaaaacggt agcaagaata
     3361 cgacgtttcg cctgccataa cacctctata aggctaaaca aatcgatttc atgactgttg
     3421 gcgggcggca gtgagtaacc tgcaaatgac tgatttttct cttgttttac attaagagat
     3481 ggcatgccgt atgacctgaa aactttatcc aatgaaagaa cacattcctg tcagagattc
     3541 taacagcaag tcagaattat ccgaaacaat ctttacgcgc cagtgcccga aaagctaaat
     3601 attcggaatt aaacttgcct gtagcatgta tcacttatgt taaaagaatt aatagttgca
     3661 ataaaaaacc cataataatt agtcattatt atgggtttca ggatttaatt tgttaaaggc
     3721 agaaacaacg cccgttattt attaataagt tcgctgatga tgggcccgat agtttcaaaa
     3781 gcggagggag aaataatatc tacatgcgcg cacggctggc gataaatagc caaagacgct
     3841 atccacggcg accagctctg ttcaggcgat acgtcttccg gcaccgtttt atccgccaca
     3901 aagagcgtgg catgtccatc aaacggtgcg ctatgcgccg tcgtcagcaa acggacggca
     3961 tccgcataat tgccttcaat ggcggtaaat aaggcgtcgg aggcatttcc ctgctgcgcg
     4021 gcgacaaacg ctgcgcgttc gcgttcaatt tccgccaata cgtccggatt gaggccattc
     4081 gcctcttttc cccgccagtt ttgtgtttcc ggcggccagg tgtccagtaa ccccaaaaac
     4141 gccaccgttt caccgcgcgc gcgcaaccgg gcggcgatcc cttgcgccag cgtccc
//
LOCUS       DAGWFR010000260         4167 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.263, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000260 DAGWFR010000000
VERSION     DAGWFR010000260.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4167)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4167)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4167
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.263"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(14..1594)
                     /locus_tag="MOX77_004413"
     CDS             complement(14..1594)
                     /locus_tag="MOX77_004413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase"
                     /protein_id="HCA3359791.1"
                     /translation="MNSTLIDSLLARRRAVSPWAGLYFLQSLLINLALGYPFSLLYTA
                     AFTCLLLLLWRYLPRGQKALLGICSLVAACYFPFGQAYGAPNFNTLLALHSTNMEESS
                     EILTIFPWYSYLTGLFIFALGIIALRRRKEEVRPRWNSLDSLCLLISVAAFFVAPVQN
                     LAWGGVFKVIDTGYPVFRFAKDVIVNNNEVIEEQHRMAQLSGIKDSWTVTAVKPRYHI
                     YVVVIGESARRDAMGAFGGHWDNTPFASHVNGDFFMDYIAASGSTQKSLGLTLNRVVD
                     NKPQYQDNFVTLANRAGFQTWWFSNQGQIGEYDTAIASIAKRADEAHFLKNGDFEADK
                     NTRDDALLTMTAQVLATERTQPQLIVLHLMGSHPQACDRTHGKYATFVQSKETSCYLY
                     TMTQTDDLLRQLYTQLRHSGDSFSLVYFSDHRLAFKERGKAVQYLAHDDKFQQNFQVP
                     FMVLSSDSKAHRIIKARRSANDFLSFFSQWTGISAKEIKNRYRFISEQKAGPVYITNF
                     KLQKVDYNHLGSDIFSLK"
     gene            complement(1860..1988)
                     /gene="mntS"
                     /locus_tag="MOX77_004414"
     CDS             complement(1860..1988)
                     /gene="mntS"
                     /locus_tag="MOX77_004414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganase accumulation protein MntS"
                     /protein_id="HCA3359792.1"
                     /translation="MNEFKRCIRVFSHSPFKVRLMLLSMLCDMINGKPEQDNPSTK"
     gene            2174..2647
                     /gene="mntR"
                     /locus_tag="MOX77_004415"
     CDS             2174..2647
                     /gene="mntR"
                     /locus_tag="MOX77_004415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese-binding transcriptional regulator
                     MntR"
                     /protein_id="HCA3359793.1"
                     /translation="MGRRAGTPTTKKVTQLVNVEEHVEGFRQVREAHRRELIDDYVEL
                     ISDLIIEVGEARQVDMAARLGVSQPTVAKMLKRLASLGFIQMIPWRGVFLTPEGEKLA
                     QESRERHQIVENFLLVLGVSPEIARRDAEGMEHHVSQETLDAFLAFTQQHGTSAE"
     gene            2644..3756
                     /locus_tag="MOX77_004416"
     CDS             2644..3756
                     /locus_tag="MOX77_004416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion transporter"
                     /protein_id="HCA3359794.1"
                     /translation="MNLAFLRALRRDRFFQLLIIVGMALSLFVPFAPRAWPGAIDWHT
                     IITLSGLMLLTKGVELSGYFDVLGRKMTRRFHTERQLAMFLVLAAAALSTFLTNDVAL
                     FIVVPLTITLKKLCAIPVNRLIIFEALAVNAGSLLTPVGNPQNILLWGRSGLSFAEFS
                     GQMAPLAVMMMLTLLLLCWFCFPGRALQYHTGTRSPQWQPRLVWSCLALYVVFLTALE
                     LRQELWGLVLVAAGFIVLARRVIVSVDWTLLLVFMAMFIDVHLLTQLPALQGVFNQVG
                     ALSHLGLWLTAIGLSQVISNVPSTILLLNYVPASTLLAWAVNIGGFGLLPGSLANLIA
                     LRMANDRRIWWRFHFYSLPMLAWAALVGYGLLQLMP"
     gene            complement(3800..>4167)
                     /locus_tag="MOX77_004417"
     CDS             complement(3800..>4167)
                     /locus_tag="MOX77_004417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HCA3359795.1"
                     /translation="YIGRLYAIHGTNANFGIGLRVSHGCVRLRNDDIKFLFENVPVGT
                     RVQFIDEPVKATTEPDGSRYIEVHNPLSTTEAQFEGKEAVPITLNKSILAVTNEPDVD
                     QTVVQQAVQDRSGMPVRLN"
BASE COUNT          963 a         1001 c         1172 g         1031 t
ORIGIN      
        1 cctgaaacgt gcattatttt agtgaaaaaa tatcgctgcc cagatggtta tagtccactt
       61 tctgtaattt gaaattggtg atataaacgg gcccggcttt ctgttccgaa ataaatcgat
      121 agcgattttt gatctcttta gcgctaattc ctgtccattg cgagaaaaaa ctcaggaaat
      181 cgttcgcgga acggcgagct ttaatgatcc gatgcgcttt actgtcgctg gatagcacca
      241 taaacggcac ctggaagttt tgctggaatt tgtcgtcatg cgccaggtac tgtaccgctt
      301 tgccgcgctc tttaaacgcc agcctgtgat cggagaaata gacgagcgaa aaactgtcgc
      361 cgctatgacg aagctgagta tagagctgac ggagcaaatc gtcggtttgc gtcatggtgt
      421 ataaataaca agacgtctct ttcgactgga caaacgtcgc gtattttcca tgagtacggt
      481 cgcaggcctg gggatgcgat cccattaaat gcaacacaat caactgcggt tgcgtgcgtt
      541 ctgtcgccaa tacctgcgcc gtcatggtta acagcgcgtc gtcgcgagta tttttatccg
      601 cttcaaaatc gccgtttttc aggaaatgcg cttcatcggc gcgtttggcg atactggcga
      661 tggccgtgtc gtattcgccg atttgcccct gattggaaaa ccaccatgtc tgaaaaccgg
      721 cgcggttagc cagcgtgacg aagttatcct gatactgcgg tttgttatcc accacgcgat
      781 tgagcgttaa accgagcgat ttttgcgttg agccgctggc ggcgatgtaa tccataaaga
      841 agtcgccatt cacatggctg gcgaaggggg tattatccca gtggccgccg aaagcgccca
      901 tggcatcccg tcgcgcgctt tcaccaatca ccacgacata gatgtgatat ctgggtttca
      961 ccgcagtaac cgtccagcta tcttttatgc cggatagctg cgccatacgg tgctgctctt
     1021 caatgacttc gttgttattg acgataacgt ctttggcgaa gcgaaaaacc ggatagccgg
     1081 tatcaataac cttaaaaacg ccgccccagg ccagattttg taccggcgcg acgaaaaatg
     1141 ccgcgacgct aatcagcagg cacaggctgt cgaggctatt ccagcgcggc ctgacctctt
     1201 cttttcggcg gcgaagcgca ataataccca gcgcaaaaat aaaaagtccg gtcaggtagc
     1261 tataccacgg gaagatggtc aggatttcgc tcgactcttc catattggtg gagtgcagcg
     1321 ccagcagcgt attaaagttc ggcgcgccgt aagcctggcc aaagggaaaa tagcaagcgg
     1381 ctaccagcga acagatgccg agcagcgctt tttgtccgcg aggcaggtag cgccagagca
     1441 gcagcaacag gcaggtaaac gccgcggtat aaagcaggct aaaggggtag ccgagcgcga
     1501 ggttaatcag cagcgactgt aaaaagtaga ggcccgccca tgggcttaca gcccgacgac
     1561 gggccagaag tgaatcgata agggttgaat tcatatgcca ctattgcaaa aacgccatgt
     1621 gctaaccctg gcgcgaaggg tcattacctg cctgattatg cgtaaaaaag gtattgggtt
     1681 cgcaacggcg agtcgcaaaa tattcaaggc tgccagaaga tagagcgtgc gggtaagaag
     1741 gccaaccgcc ggaaagaaaa tgttttgcga agagaatagc aaaaccacaa aaaaaacagg
     1801 ggaaatgggc gccatttccg ttgaggatgc aaaataaagc ggcgtaccgc accgccgcgt
     1861 tatttcgtgg aagggttatc ctgttccggt ttgccgttga tcatatcgca caacatagag
     1921 agcagcatta accggacttt aaagggagag tgactgaaca cgcgtataca cctcttaaat
     1981 tcgttcatat aaacctcctg atgtttctat cccatcgatc cgtgagggat gtctgcatta
     2041 catacagata tagcacaggc tatgttttat agctattgct aaaacgttaa ttttttgtgc
     2101 ccggacaact ctggtttaca atgagcgctc tgtcagctga cgcgttaacg cgtcacagaa
     2161 acgaggaagc aaaatgggtc gtcgcgcagg tacgccaaca acaaaaaaag tgacgcaatt
     2221 ggtgaacgta gaagaacacg ttgaaggatt tcgtcaggtc agagaggcgc atcggcgtga
     2281 gttgatagac gactacgttg agctgatttc cgatttaatt attgaggtag gggaagcgcg
     2341 tcaggtggat atggcggcgc ggctcggcgt ctcccagccg actgtggcca aaatgcttaa
     2401 gcgcctggca tcgttaggat ttattcaaat gatcccctgg cgcggcgttt ttctgacgcc
     2461 ggaaggggag aagctggcgc aggaaagccg cgagcggcat caaattgtcg aaaatttttt
     2521 actggtatta ggcgtaagcc cggaaatcgc gcgtcgtgat gcggaaggga tggaacacca
     2581 tgtcagccaa gagacattag atgccttttt ggccttcacg caacagcatg gaacatctgc
     2641 agaatgaatc tggccttttt acgggcgctg cggcgtgacc gtttttttca gttgttgatc
     2701 attgtgggga tggcgttaag cctgtttgtt ccttttgcgc cccgcgcctg gcctggcgcg
     2761 attgactggc acaccattat taccctcagt gggttaatgt tgctcactaa aggcgttgag
     2821 ctgagcggct attttgatgt gctgggacgc aagatgacgc gccgatttca taccgagcgg
     2881 caactggcga tgttcctggt gctggctgcg gcggcgctgt cgacctttct gacaaacgat
     2941 gtcgcgctgt ttatcgttgt gccgctgacg ataacgttaa aaaaactgtg cgcgattccg
     3001 gtcaaccgat tgattatttt tgaagcgtta gcggtgaacg ccggttcgct gctgacgcct
     3061 gtcggtaatc cgcaaaatat tctgttgtgg ggacgctccg gcttaagctt tgctgaattt
     3121 agcgggcaaa tggcgccgct tgccgtcatg atgatgctga cgttactgct cctgtgctgg
     3181 ttttgttttc cgggtagggc gttacagtat cataccggta cgcgttcgcc gcagtggcag
     3241 ccccgtctgg tgtggagttg cctggcatta tatgtcgttt ttcttaccgc gctggagctc
     3301 aggcaagagt tatggggact ggtgttggtg gcggctgggt ttattgtgct ggcgcgcagg
     3361 gtgatagtca gcgtggactg gacgctgctg ctggtattta tggcgatgtt tattgatgtc
     3421 catctgctaa cgcaattgcc ggcgttgcag ggcgttttca accaagttgg cgcactgtct
     3481 cacctgggac tttggctaac cgctatcggc ctgtcgcagg ttatcagtaa tgtgcccagt
     3541 accattctcc tgctgaacta tgtaccggcc tcgacgttgc tggcgtgggc ggtgaatatc
     3601 ggcgggtttg gtctgctgcc ggggtcgctg gcaaatctta ttgctttacg gatggcgaac
     3661 gatcgccgaa tctggtggcg atttcatttc tattcgctgc cgatgctggc atgggcggcg
     3721 ctggtgggat atggattatt gcaactgatg ccgtaagaga agcccgatag tgtctatcgg
     3781 gcttcgcagg cagagtctgt cagttcagac gaaccggcat cccggaacga tcctgaactg
     3841 cctgttgtac gacggtctga tcaacgtcag gctcgttggt gacggccagg atactcttat
     3901 taagcgtgat cggcaccgct tccttacctt caaactgcgc ttccgtcgtt gacagcgggt
     3961 tatgcacctc aatgtaacgg ctaccgtccg gctcggtggt ggcttttacc ggttcatcga
     4021 taaactgcac gcgggtaccg accggcacat tttcaaacag gaatttgata tcgtcgttgc
     4081 gcagacgtac gcagccgtgg ctcacgcgaa gcccgatgcc gaagttggcg ttggtgccgt
     4141 gaatagcata caggcgaccg atgtaca
//
LOCUS       DAGWFR010000261         4129 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.264, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000261 DAGWFR010000000
VERSION     DAGWFR010000261.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4129)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4129)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4129
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.264"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..204)
                     /locus_tag="MOX77_004418"
     CDS             complement(<1..204)
                     /locus_tag="MOX77_004418"
                     /EC_number="2.3.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459773.1"
                     /note="catalyzes the formation of 8-amino-7-oxononanoate
                     from 6-carboxyhexanoyl-CoA and L-alanine; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-amino-7-oxononanoate synthase"
                     /protein_id="HCA3359796.1"
                     /translation="MSWQQRVDDALTARRATDTLRRRYVVSQGAGRWLVANGRQYLNF
                     SSNDYLGLSQHPQIIRAWQQAATR"
     gene            complement(201..1241)
                     /gene="bioB"
                     /locus_tag="MOX77_004419"
     CDS             complement(201..1241)
                     /gene="bioB"
                     /locus_tag="MOX77_004419"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="HCA3359797.1"
                     /translation="MARHPRWTLSQVTELFEKPLLELLFEAQQIHRQHFDPQQVQVST
                     LLSIKTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVLDSARKAKNAGSTRFCMGAAW
                     KNPHERDMPYLEKIVQGVKAMGLETCMTLGMLNESQAQRLANAGLDYYNHNLDTSPEF
                     YGNIITTRTYQERLDTLEKVREAGIKVCSGGIVGLGETVTDRAGLLLQLANLPTPPES
                     VPINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMPTSYVRLSAGREQMNEQTQAMC
                     FMAGANSIFYGCKLLTTPNPAEDKDLQLFRKLGLNPQQTRVLAGDNEQQQRLEQTLMT
                     PDTDDYYNAAAL"
     gene            1328..2617
                     /gene="bioA"
                     /locus_tag="MOX77_004420"
     CDS             1328..2617
                     /gene="bioA"
                     /locus_tag="MOX77_004420"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HCA3359798.1"
                     /translation="MTTDDLAFDKRHIWHPYTSMTSPLPVYPVERAEGCELVLASGER
                     LIEGMSSWWAAIHGYNHPQLNAAMKAQIDAMSHVMFGGITHQPAVNLCRKLVAITPEP
                     LECVFLADSGSVSVEVAMKMALQYWQARGESRQRFLTFRHGYHGDTFGAMSVCDPDNS
                     MHSLWKGYLPENLFAPAPQSRMDGEWDESDIAPFARLMAAHRHEIAAVILEPIVQGAG
                     GMRIYHPQWLRRIRNMCDREGILLIADEIATGFGRTGKLFACEHAGIAPDILCLGKAL
                     TGGTMTLSATLTTRQVAETISNGEAGCFMHGPTFMGNPLACAVACASLTLLESGEWRQ
                     QVASIESQLRAELAPAQSSPWVADVRVLGAIGVVETTHPVNTAALQRFFVGQGVWIRP
                     FGKLIYLMPPYIIRPDQLRRLTQAVNDAVHNETFFSH"
     gene            2675..3151
                     /locus_tag="MOX77_004421"
     CDS             2675..3151
                     /locus_tag="MOX77_004421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kinase inhibitor"
                     /protein_id="HCA3359799.1"
                     /translation="MKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPMGTK
                     SFVVTCYDPDAPTGSGWWHWVVVNLPADTRVLTQGFGSGLVAVPDGVIQTRTDFGKAG
                     YGGAAPPKGETHRYIFTVHALDVERLDVDEDASGAMVGFNVHFHSLASASITAMFS"
     gene            complement(3236..>4129)
                     /locus_tag="MOX77_004422"
     CDS             complement(3236..>4129)
                     /locus_tag="MOX77_004422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid lyase"
                     /protein_id="HCA3359800.1"
                     /translation="FEAQELFASAVVCGALTTEAVLGSCRPFDARIHAARGQQGQIDV
                     ARLFRHLLTDTSAIAESHHHCHKVQDPYSLRCQPQVMGACLTQLRQTKEVLLAEANAV
                     SDNPLVFAEAGEVISGGNFHAEPVAMAADNLALAIAEIGALSERRITLMMDKHMSQLP
                     PFLVKNGGVNSGFMIAQVTAAALASENKALAHPHSVDSLPTSANQEDHVSMAPAAGRR
                     LWEMAANTRGVIAVEWLAACQGIDLREGLTSSPLLEQARQTLRERVAHYTQDRFFAPD
                     IECATTLLAQGALQRLVPDFM"
BASE COUNT          835 a         1195 c         1173 g          926 t
ORIGIN      
        1 acgcgtcgct gcctgttgcc aggcgcgaat aatctgcgga tgttgactta agccgaggta
       61 atcattgctg gaaaagttaa gatactgtcg cccgttcgct accagccagc gtccggcgcc
      121 ctgcgatacc acatagcggc ggcgcaacgt atccgtcgcc cgacgcgccg tcagcgcatc
      181 gtcgacgcgt tgttgccaac tcataaggct gccgcgttgt aataatcatc ggtgtcaggc
      241 gtcatcagcg tctgctccag acgttgctgc tgctcgttat cgcccgccag caccctggtc
      301 tgctgcggat tcagccccag cttacggaat aactgcagat ccttgtcctc tgccggattt
      361 ggcgtagtta acaatttgca gccatagaaa atcgagttcg ccccggccat aaagcacatc
      421 gcctgggtct gctcgttcat ctgttcacgt cctgcggaaa gacgcacgta tgaggtcggc
      481 atcatgatgc gcgctacggc gatagtacga ataaaatcaa acgcatccac gtcatcgtta
      541 tccgcaagcg gcgtgccttt taccttcacc agcatgttga ttggcacgct ttccggcggc
      601 gtaggcaggt tcgccaactg caacaacagt ccggcgcgat cggtaaccgt ttcgcccaga
      661 cccacaatgc cgccggagca cactttaatc cctgcttcac ggactttttc cagcgtgtcg
      721 aggcgctcct gataggtacg ggtagtgatg atattgccgt aaaactccgg cgaggtatcg
      781 aggttgtggt tgtagtaatc cagcccggcg ttagccagac gctgcgcctg gctctcgttc
      841 aacatgccga gcgtcataca ggtttccagc cccatcgctt tgacgccctg tacaatcttc
      901 tccagataag gcatatcgcg ttcatgcgga ttcttccagg ccgcccccat acagaagcgg
      961 gtcgaaccgg cgtttttcgc tttacgggcg gagtccagta cctgctctac ctccattaaa
     1021 cgctcggctt ccagcccggt tttatagcgc gagctctgcg ggcagtattt acaatcctcc
     1081 gggcaggcgc cggttttgat cgacaacagc gtactaacct gtacctgctg cggatcgaaa
     1141 tgctggcgat gaatttgctg cgcttcaaac agcaattcca gcagtggttt ttcaaataat
     1201 tcggttactt gcgacagtgt ccagcgtggg tggcgagcca tcgggcctct ccaaaatatg
     1261 ttgtttgttt ttgatatggt gtagactcgt aaacctaaat ctttttaatt tggtttacaa
     1321 gtcgattatg acaacggacg atctggcctt cgataaacgc catatttggc atccttacac
     1381 ttccatgacc tcgccgctgc cggtatatcc cgttgagcgg gccgaaggct gcgagctggt
     1441 tctcgcctcg ggcgaacgcc tgattgaggg gatgtcctcc tggtgggcgg ccattcatgg
     1501 ttataaccac ccgcaattga acgcggcgat gaaagcgcaa attgacgcca tgtcgcatgt
     1561 catgttcggc ggcataaccc atcaacctgc ggtgaatctg tgccgtaagc tggtcgcgat
     1621 aacgcctgag ccgctggagt gtgtctttct ggccgactct ggttcggtgt cggtagaagt
     1681 ggccatgaag atggcgctgc aatactggca ggctcgtggc gaatcgcgtc agcgttttct
     1741 gacgtttcgc cacggttatc atggcgacac gttcggcgcg atgtcggtgt gcgatccgga
     1801 taactccatg cacagcttgt ggaaaggcta tctgcctgaa aatctgttcg cgccggcgcc
     1861 gcaaagccgg atggatggcg aatgggatga aagcgacatc gcgccatttg cccgcctgat
     1921 ggccgcgcat cgccatgaaa tagccgccgt gattctggaa cctatcgttc agggcgcggg
     1981 cgggatgcgc atatatcatc cacaatggct caggcgtatt cgtaacatgt gcgatcgcga
     2041 aggcattctg ctgattgccg atgaaatagc caccgggttt ggccgtaccg gcaaactgtt
     2101 cgcctgtgag cacgccggga tcgcgccgga tattctgtgt ctcggcaaag ccttaaccgg
     2161 cggtaccatg accctctcgg caacgctcac gacacgccag gttgcagaga ctattagcaa
     2221 cggcgaggcg gggtgtttta tgcatggccc gacgtttatg gggaatccgc tggcctgcgc
     2281 cgtcgcttgc gccagcctga cgctgctgga aagcggcgaa tggcgtcagc aggtggcgtc
     2341 tatcgagtct cagttacgcg ctgagttagc ccccgcgcaa agttcgccct gggtggcgga
     2401 tgtgcgggtg ttgggcgcga ttggggtggt tgaaactacg catccggtca atacggcggc
     2461 gcttcaacgc ttcttcgtcg ggcaaggcgt ctggatcagg ccgttcggca agctaatcta
     2521 cctgatgccg ccctacatta ttcgtccgga tcaactgcgc cgtttgaccc aggcggtcaa
     2581 tgacgcggta cacaatgaaa cattttttag ccattaatca gcggtaagcg atgctgcttc
     2641 tggctacact tctggtgagt caaaaggaga gcgcatgaaa cttatcagca acgatttgcg
     2701 cgatggagat aaacttcctc atcgccacgt ttttaacggt atgggctatg atggcgataa
     2761 tatttcgccg catctggcct gggacgacgt gccgatgggc accaaaagtt ttgtcgtgac
     2821 ctgttacgat cctgacgcgc cgaccggctc cggctggtgg cactgggtgg tggtgaacct
     2881 cccggcggat acgcgcgtac tgacccaggg gttcggctca ggcctggtgg ccgtaccaga
     2941 cggcgtcatt cagacgcgta ccgatttcgg taaagcgggc tacggcggcg cggcgccgcc
     3001 taaaggggaa acgcaccgct atatctttac ggttcacgcg ctggacgtcg agcgtcttga
     3061 cgttgatgaa gacgccagcg gcgcgatggt cggctttaac gtgcatttcc attcgctcgc
     3121 cagcgcctcg ataacggcga tgttcagtta aacgctgtgt cggatggcgg cataaacgtc
     3181 ttacccttcc aacgggttgg gtaagccgaa tacgtgccgc gccatccggc aacattcaca
     3241 taaagtccgg caccagacgc tgtaacgcgc cttgcgccag cagcgtcgtc gcacactcaa
     3301 tatcgggcgc gaaaaaacga tcctgcgtat agtgcgccac ccgctcgcgc agtgtctgcc
     3361 gcgcctgttc cagtaacggg ctggaggtta acccttcccg taaatctatc ccctgacagg
     3421 cagccagcca ctccacggca atgacgccgc gggtattcgc cgccatttcc cagagtcgcc
     3481 gtcccgccgc cggggccatt gagacatgat cttcctgatt cgccgaggtc ggcaggctat
     3541 ccacgctgtg cgggtgcgcc agcgctttat tctcgctggc aagcgccgcg gcggtgacct
     3601 gggcaatcat aaaaccggaa ttaacgccgc catttttcac caggaacggc ggtaactgcg
     3661 acatatgttt atccatcatc agcgtgatgc gccgctccga tagcgcgccg atttccgcta
     3721 tcgccagcgc cagattatcc gccgccatgg caaccggttc agcatggaag ttaccgccgg
     3781 agatcacctc ccccgcctcg gcaaagacca gcggattatc ggacaccgca ttggcctcag
     3841 ccagcagtac ctctttcgtc tgacgtaact gggtcagaca agcgcccatt acctgcggct
     3901 ggcagcggag ggaatacggg tcctgaactt tatgacagtg gtgatgtgat tcagcaatgg
     3961 cgctggtatc ggtcagcaga tgccggaaca accgcgcgac gtcaatttgc ccctgttgtc
     4021 cgcgcgcggc atgaatgcgc gcatcaaaag gacggcacga tcccagtacg gcttcggtag
     4081 tcagcgcgcc gcagacgacg gcggaggcaa ataattcctg tgcctcaaa
//
LOCUS       DAGWFR010000262         4096 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.265, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000262 DAGWFR010000000
VERSION     DAGWFR010000262.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4096)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4096)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4096
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.265"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..730
                     /gene="purK"
                     /locus_tag="MOX77_004423"
     CDS             <1..730
                     /gene="purK"
                     /locus_tag="MOX77_004423"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HCA3359801.1"
                     /translation="GELAIIKRRVGGYDGRGQWRLRADETGQLPDDCYGECIVERGIH
                     FSGEVSLVGARAHDGSTVFYPLTHNLHQDGILRTSVAFPQANAEQQEQAESMLSAIMQ
                     ALNYVGVMAMECFITPEGLLINELAPRVHNSGHWTQNGASISQFELHLRAITGLPLPA
                     PVINAPSVMINLIGSELNYDWLKLPLVHLHWYDKAVRPGRKVGHLNLTDSDTSRLSAT
                     LEALSPLLPGEYASGIIWAQSKLK"
     gene            complement(771..1664)
                     /locus_tag="MOX77_004424"
     CDS             complement(771..1664)
                     /locus_tag="MOX77_004424"
                     /EC_number="2.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamate kinase"
                     /protein_id="HCA3359802.1"
                     /translation="MKTLVVALGGNALLQRGEALTAENQYRNIADAVPALARLARSYR
                     LAIVHGNGPQVGLLALQNLAWKAVEPYPLDVLVAESQGMIGYMLAQRLALEPDMPPVT
                     AVLTRIKVSADDPAFLEPEKFIGPVYSPEEQMALEATYGWHMKRDGKYLRRVVASPAP
                     RQIIESTAIELLLKEGHVVICSGGGGVPVAGEGEGVEAVIDKDLAAALLAEQIAADGL
                     IILTDADAVYEHWGTPQQRAIRQASPDELAPFAKADGAMGPKVTAVSGYVKRCGKPAW
                     IGALSRIDDTLAGRAGTCICL"
     gene            complement(1668..2477)
                     /locus_tag="MOX77_004425"
     CDS             complement(1668..2477)
                     /locus_tag="MOX77_004425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2877 domain-containing protein"
                     /protein_id="HCA3359803.1"
                     /translation="MKRIHPLMASRQSADYRQPWQMSGVWRRSINFVAKSGELLTLHR
                     RGSGFSPGGWILRGGDFDALRDVLTDGEKPQLTAAGIQIGEFLLCEPERRCSLRVPRY
                     LASPRLNATYMQRSEETGLFGPLTVAAAQPLCPELRQFCHCFQSALAGAATDWRLWLG
                     KGPGLTPSHEDTLTGMLLAAWYFGAIDERAGRNFFAQSGSLDRATTLVSVSYLRYAAM
                     GYFASPLLHFIHALRRDARTETAIDGLLALGHTSGADTLLGFWLGQQIVKG"
     gene            complement(2489..3748)
                     /locus_tag="MOX77_004426"
     CDS             complement(2489..3748)
                     /locus_tag="MOX77_004426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1116 domain-containing protein"
                     /protein_id="HCA3359804.1"
                     /translation="MFTSVAQANAAVIEQIRRARPHWLDVKPASSLISVLNQGKTLLH
                     AGPPMRWQEMTGPMKGACIGACLFEGWAKDEMSALALLEQGKVNFIPCHHVNAVGPMG
                     GITSASMPMLVVENITDGNRAYCNLNEGIGKVMRFGAYGEDVQQRLRWMRDVLMPVLS
                     AALGRLERGLDLTAMMAQGITMGDEFHQRNIASSALLMRTLAPHIARLQHDKQQIAEV
                     MDFLSVTDQFFLNLAMAYCKAAMDAGAQIRAGSIVTAMTRNGDMFGIRVSGLGDRWFT
                     APVNTPQGLFFTGFSQDQANPDMGDSAITETFGIGGAAMIAAPGVTRFVGAGGMEAAK
                     SVSEEMAEIYLERNMQLQIPGWDFQGACLGLDIRRVVETGITPLINTGIAHKEAGIGQ
                     IGAGTVRAPLACFEQALEALAESMGVS"
     gene            complement(3758..>4096)
                     /locus_tag="MOX77_004427"
     CDS             complement(3758..>4096)
                     /locus_tag="MOX77_004427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459524.1"
                     /note="multicopy suppressor of dominant negative ftsH
                     mutations; putative acyl-CoA synthetase; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA synthetase FdrA"
                     /protein_id="HCA3359805.1"
                     /translation="SDQPLFAIATVTGTERDPQCRSQQIAALEDAGITVVDSLPEATL
                     LAAELIRPTLSSTHPSAPRLLEAVAVINAGLRSFALDLQAAGMPVVHYQWAPVAGGNK
                     KLARLLERLQ"
BASE COUNT          904 a         1274 c         1083 g          835 t
ORIGIN      
        1 gggcgaactg gcgattatta agcgtcgcgt tggcggctac gacggtcgcg ggcagtggcg
       61 tctacgcgcg gacgaaaccg ggcaactgcc ggatgactgc tatggcgaat gtattgttga
      121 gcgcggtatc catttttccg gcgaagtgtc gttagtcggc gcgcgcgctc atgacggcag
      181 taccgtgttt tacccgctaa cgcacaattt gcatcaggac ggcatcttgc ggaccagcgt
      241 cgcgttccca caggcgaacg ccgaacagca ggagcaggcg gaatcgatgc tgtcagcaat
      301 tatgcaggcg ttgaactacg tcggcgtaat ggcgatggaa tgttttatca cgccggaagg
      361 cctgttaatc aatgaactgg cgccgcgcgt gcataacagc ggacactgga cgcaaaatgg
      421 cgccagcatc agtcagtttg aattgcattt gcgcgcgatt accggcttgc cgttgcccgc
      481 gccggtgatt aacgccccgt cggtgatgat caatctgatc ggcagcgagc tgaattacga
      541 ctggctgaag ctgccgctgg tacatctgca ctggtatgat aaagcggtac gtccggggcg
      601 aaaagtcggc catctgaatc tgaccgacag cgatacgtca cgtcttagcg ccaccctgga
      661 agcgctctct ccgctcctgc cgggcgaata cgccagcggc attatctggg cgcaaagtaa
      721 gcttaaataa acagcgtggg cggcgcattc tctgtcgccg cccgtcgcga tcacagacag
      781 atgcaggttc ccgccctgcc cgccagggta tcgtcaatac gcgacagcgc gccaatccat
      841 gccggctttc cgcaccgctt cacatacccg cttaccgcgg tcaccttcgg tcccatcgcg
      901 ccatcggctt tggcaaacgg cgccagctca tcgggcgaag cctgacgaat agcgcgctgc
      961 tgcggcgttc cccaatgttc atacaccgca tccgcatccg tcaaaatgat cagaccatcg
     1021 gccgctatct gctccgccag caatgccgcc gccaggtctt tatctatcac cgcctcgacc
     1081 ccttcgccct cgccagcaac aggtaccccg ccaccgccgc tgcaaatcac cacatggccc
     1141 tcttttagca ataactcaat agcggtgctt tcgataatct gacgcggcgc cggggaagcg
     1201 acgacacggc gcagatattt tccatcacgt ttcatatgcc agccataagt cgcttccagc
     1261 gccatttgct cttctggcga ataaacggga ccgataaact tttccggttc aagaaaagca
     1321 ggatcgtccg ccgatacctt tattcgcgtt aataccgcag tcaccggcgg catatcgggt
     1381 tcaagcgcca gacgctgcgc cagcatatag ccgatcattc cctgactttc cgccaccagc
     1441 acatccagcg gataaggctc aacggctttc caggcaaggt tctgtaaagc caacaggccg
     1501 acctgggggc cgttgccatg tactatcgcc agccgatacg agcgggcaag tcgtgccagc
     1561 gcaggcaccg cgtcggcaat attgcgatat tgattctctg ccgttagcgc ttctccgcgc
     1621 tgcaataatg cgttgccgcc aagagcaact accaacgttt tcattcccta tccttttact
     1681 atttgttgtc caagccagaa ccccagcagc gtatccgcgc cagaggtgtg ccccagcgcc
     1741 agcagtccgt caatcgccgt ttctgtgcga gcatctcgtc gcagcgcatg aataaagtgg
     1801 agtaaaggcg acgcgaaata ccccatagcc gcatagcgta aatagctgac gctcacgagc
     1861 gtcgtcgccc gatcaaggct gccggattgg gcaaaaaaat tacgcccggc gcgttcatct
     1921 atggcgccaa aataccaggc cgccagcaac attcccgtca gcgtgtcctc atgactgggc
     1981 gttaagcccg gccctttacc cagccatagc cgccagtcag tcgcagcacc tgcaagcgct
     2041 gactgaaagc agtgacaaaa ctggcgaagt tccggacata gaggctgagc tgcggcgacg
     2101 gttaacggcc caaacagtcc cgtctcctca ctacgctgca tgtacgtcgc gttaaggcgc
     2161 ggcgacgcaa gatagcgtgg aacccgcagc gaacagcgcc tctccggctc gcataaaaga
     2221 aactcgccaa tctgaatacc ggcagcggtt aactgcggtt tttcgccatc ggtgagcaca
     2281 tcacgcaagg cgtcaaaatc gccgccgcgc agtatccacc ctcctggact gaagccgctc
     2341 ccccgacggt gaagcgttaa taactcaccg cttttcgcca caaaattaat agagcgacgc
     2401 catacccctg acatctgcca gggttgccga taatccgccg attgtcggct tgccataaga
     2461 ggatggatac gtttcatgag acgctctctt aacttacgcc catgctttcc gccagcgctt
     2521 ccagcgcctg ctcgaaacag gccagcggcg cacggacggt tcccgcgcca atctgaccaa
     2581 ttcccgcctc tttatgcgcg atacccgtgt taatcagcgg cgtaattccg gtctcgacca
     2641 cgcggcggat atccagtccc agacaggccc cctgaaaatc ccagccgggg atttgtagct
     2701 gcatgttgcg ttcgagataa atttcagcca tctcttcaga aacagatttc gccgcttcca
     2761 ttcccccggc accgacaaaa cgcgttacgc caggcgcggc aatcatcgct gcgccgccaa
     2821 taccaaacgt ttcagtaatg gcgctgtcgc ccatgtccgg gttggcctga tcctgcgaaa
     2881 aaccggtaaa aaatagcccc tgcggcgtat taacaggcgc ggtgaaccaa cggtcgccca
     2941 gaccgctaac ccgaatgcca aacatatcgc cattgcgggt catcgccgtc acaatactgc
     3001 cggcgcgaat ctgcgcgccc gcgtccatgg cggctttaca gtaggccatc gccagattaa
     3061 ggaagaattg atcggtgacg ctcagaaaat ccatcacttc cgctatctgc tgcttatcgt
     3121 gttgcagacg ggcgatatgc ggcgccaacg tgcgcatcag caatgcggaa gaggcgatat
     3181 tgcgctggtg gaattcatct cccatcgtaa tgccctgcgc catcatcgcg gtcaggtcaa
     3241 gcccccgctc cagacgaccc agcgccgcgc ttaataccgg catcagcaca tcgcgcatcc
     3301 agcgcaaacg ttgctgaaca tcttcgccat aggcgccgaa acgcatcact ttgccgatcc
     3361 cttcgttgag attgcagtac gcgcgattgc cgtcggtgat attttccacg accagcatcg
     3421 gcatactggc tgacgtaata ccgcccatcg gccccacggc gttaacgtga tggcagggaa
     3481 taaagttgac ctttccctgc tctaacagcg cgagcgcgct catttcatct ttggcccatc
     3541 cttcaaacag gcatgcgccg atacaggccc ctttcatcgg gccggtcatc tcttgccagc
     3601 gcatcggcgg cccggcatga agaagcgttt tcccctgatt gagtacgcta attaatgaag
     3661 aagctggctt cacatccagc cagtgcggac gtgcgcgacg aatttgttcg atgactgcag
     3721 cgttggcttg cgccactgat gtaaatatgg gaacccctta ttgcaaacgt tctaacagac
     3781 gagccagttt tttattaccg ccagcgacag gcgcccactg gtagtgcacc acgggcatac
     3841 cggcagcctg taaatccagc gcgaagctac gtaacccggc attaatcacc gctactgctt
     3901 ccagtaaccg gggagctgat ggatgagtag aagagagagt gggtcgaatc agttccgcgg
     3961 ccaacagagt ggcttcggga agagaatcca ctaccgtgat gccggcatct tcgagcgcgg
     4021 cgatttgttg cgagcggcac tgaggatcgc gttccgttcc ggtgacggtt gcgatggcga
     4081 acagcggctg gtcgct
//
LOCUS       DAGWFR010000263         3938 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.266, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000263 DAGWFR010000000
VERSION     DAGWFR010000263.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 3938)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3938)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3938
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.266"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            73..678
                     /gene="leuD"
                     /locus_tag="MOX77_004428"
     CDS             73..678
                     /gene="leuD"
                     /locus_tag="MOX77_004428"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HCA3359806.1"
                     /translation="MAEKFTQHTGLVVPLDAANVDTDAIIPKQFLQKVTRTGFGAHLF
                     NDWRFLDEKGQQPNPEFVLNFPEYQGASILLARENFGCGSSREHAPWALTDYGFKVVI
                     APSFADIFYGNSFNNQLLPVKLSDEQVDELFTLVKANPGIKFEVDLEAQVVKAGDKTY
                     SFKIDDFRRHCMLNGLDSIGLTLQHEDAIAEYENKQPAFMR"
     gene            complement(1013..1135)
                     /gene="sgrT"
                     /locus_tag="MOX77_004429"
     CDS             complement(1013..1135)
                     /gene="sgrT"
                     /locus_tag="MOX77_004429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001248755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose uptake inhibitor SgrT"
                     /protein_id="HCA3359807.1"
                     /translation="MRQFWLRYFAATEKTSWLACLSAPQRLKMLAELMQWEATD"
     gene            1228..2886
                     /gene="sgrR"
                     /locus_tag="MOX77_004430"
     CDS             1228..2886
                     /gene="sgrR"
                     /locus_tag="MOX77_004430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator SgrR"
                     /protein_id="HCA3359808.1"
                     /translation="MPSGRLQQQFIRLWQCCDGKTQDTTLNELADLLNCSRRHMRTLL
                     NTMQARGWLTWEAEVGRGKRSRLTFLYTGLALQQQRAEDLLEQDRIDQLVQLVGDKSA
                     VRQMLISHLGRSFRQGRHILRVLYYRPMHNLLPGTALRRSETHIARQIFSSLTRVNEE
                     NGELEADIAHHWQQISPLLWRFYLRPGIHFHHGRELEMEDVIASLTRINTLPLYSHIT
                     KIDSPTAWTLDIHLSQPDRWLPWLLGQVPAMILPREWETLANFASHPIGTGPYAVRRN
                     TPNQLKILAFDDYFGYRALIDEVNVWVLPDISEEPACGLMLEGPIQGGEKAIESRLEE
                     GCYYLLFDARTPRGAHPQVREWVSHVLSPTNLLYHADEPLQQLWFPAYGLLPRWHHAR
                     PGPGEKPAGLETLTLTFYREHIEHRVIARIMSALLAEHQVHLHIQEIDYDQWHAGEIE
                     SDIWLNSANFTLPLDFSLFAHLCEVPLLQNCIPRDWQDDAAQWRAGEMNLANWCQQLL
                     ANKAIVPLIHHWLIIQGQRSMRGLRMNTLGWFDFKSAWFAPPDP"
     regulatory      2933..3032
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            3064..>3938
                     /locus_tag="MOX77_004431"
     CDS             3064..>3938
                     /locus_tag="MOX77_004431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine ABC transporter substrate binding
                     subunit"
                     /protein_id="HCA3359809.1"
                     /translation="MLKKYLPLLLLCAAPAFAKPVLTVYTYDSFAADWGPGPAVKKAF
                     EADCNCELKLVALEDGVSLLNRLRMEGKNSKADVVLGLDNNLLEAATQTKLFAKSGVA
                     NEAVKVPGGWKNDTFVPFDYGYFAFVYDKSKLKNPPKSLKELVESDQKWRVIYQDPRT
                     STPGLGLLLWMRKVYGDNAPQAWQKLAAKTVTVTKGWSEAYGLFLKGESDLVLSYTTS
                     PAYHIIEEKKDNYAAANFSEGHYLQVEVAARTVASKQPELAEKFLKFMVSPAFQNAIP
                     TGNWMYPVADVALPAG"
BASE COUNT          923 a         1090 c         1067 g          858 t
ORIGIN      
        1 cggcgatggc cgccgctgcc gccgttaccg gccacttcgc cgatattcgc agcatcaaat
       61 aaggaaacta ccatggcaga gaaatttacc cagcataccg gcctggttgt cccactggat
      121 gccgccaacg tcgataccga tgcaattatc cctaaacagt ttttgcagaa ggttacgcgc
      181 accggttttg gcgcccatct gtttaacgac tggcgtttcc tggacgaaaa gggccaacag
      241 ccaaatccgg aattcgtgtt gaactttccg gaatatcaag gcgcgtcgat actgttggcg
      301 cgggaaaact ttggctgcgg ctcttcacgc gaacacgcgc cgtgggcgtt gaccgattac
      361 ggttttaaag tggtgatcgc gccaagcttc gccgacatct tctacggcaa cagtttcaat
      421 aaccaactgc tgccggtgaa gttaagcgac gaacaggtcg atgagctgtt tacgctggtg
      481 aaagccaatc cgggcattaa atttgaagtg gatctggaag cacaggtggt gaaagcaggc
      541 gataagacct acagttttaa aatcgacgac ttccgccgcc actgcatgtt gaacggtctg
      601 gacagcatcg ggctgacgct gcagcacgaa gacgcgattg ccgagtacga aaataaacaa
      661 ccggcattta tgcggtaacc tttcacgcct taccgggcct acagggtatg caatatcacc
      721 aggttgccac tatattctgt aggcctgata agcgtagcgc catcaagcgc ctggttactc
      781 atcagtcgct catgccgggg atattccggc attttttata cgtcttttac tcgcccggtc
      841 atcacccgcg tgaccacaga aaccgccgca gaaatcccgt tgagacgccg tcccatcgtc
      901 gtcatccaga aacagccgaa ataaaaaagc cagcagatat tatctgctgg cgggtgattt
      961 taggctatcg cctacaccaa tactcagtca cacatgatgt ctgcaattgg cttcaatcgg
     1021 tcgcctccca ctgcatcagt tccgcgagca tttttaagcg ctgcggcgcg ctcaggcaag
     1081 ccagccagga cgttttttcc gtcgcggcaa aatatctcaa ccagaactgg cgcatagtga
     1141 cctcttcctc ttgcttcatc gaaagatatt attggcctaa tatagggata ataaaattgc
     1201 tgagtttttc atcggagttc cccttttatg ccctcaggtc gcctgcaaca acaatttatc
     1261 cgtctctggc aatgttgtga cggtaaaacg caagacacca cgcttaatga gctggcggat
     1321 ctgctgaact gttcgcgtcg ccatatgcgt acgctgctaa atacgatgca ggcgcgcggt
     1381 tggctaacat gggaagccga ggtcggacgc ggaaagcgtt cgcgtctgac gttcctgtat
     1441 accggactgg cgctgcaaca gcagcgggcg gaagacctgc tggaacaaga tcgaatcgat
     1501 caactggtac aactggtcgg cgataaaagc gctgtcaggc aaatgctgat ttcccatctg
     1561 ggacgcagct tccgccaggg gcggcatatt ctgcgggttc tttactatcg tccgatgcac
     1621 aatctcctgc cgggaaccgc attacgtcgc tcggaaactc atattgcccg gcaaattttc
     1681 agttcgctca cgcgggtaaa tgaggaaaac ggggaactgg aagcggacat tgcgcaccac
     1741 tggcagcaaa tttccccttt actgtggcgc ttctacctgc gccccggcat tcattttcat
     1801 catggccgcg agctggagat ggaagatgtc atcgcctcgc tgacgcgtat caatacgctt
     1861 ccgctttact cgcacatcac aaagatagac tcccctaccg cgtggacgct ggatattcat
     1921 ctttcccagc cggatcgctg gttgccgtgg ctgctgggcc aggtcccggc gatgattttg
     1981 ccgcgggagt gggaaacgct ggctaatttc gccagccacc ctatcggcac cgggccttat
     2041 gccgtgcggc gtaatacgcc aaaccagctc aagatactcg cctttgatga ttacttcggc
     2101 tatcgggcgt tgatagacga agtgaacgtc tgggtactgc cggatatcag tgaagaaccg
     2161 gcctgcggct tgatgctgga agggccaata caaggcggtg aaaaagcgat agaaagccga
     2221 ctggaagagg ggtgctatta cctgctattc gacgccagaa cgccgcgcgg cgcgcatccg
     2281 caggtcagag aatgggtaag ccacgtcctc tcccccacca atttactcta tcatgccgat
     2341 gaaccgctac agcagctctg gttcccggcc tatgggcttt taccgcgctg gcaccacgcc
     2401 cgtccaggcc cgggcgaaaa acccgccggg ctggaaaccc tcacgctgac cttctatcgc
     2461 gaacacattg agcaccgggt tatcgcccgt atcatgagcg cgcttctggc tgaacatcag
     2521 gtgcatctgc atattcagga gatcgactac gatcaatggc acgccggcga gatcgaaagc
     2581 gatatctggc tcaatagcgc taactttacg ctgccgctgg atttctcgct gttcgcgcac
     2641 ctgtgcgaag taccgctctt gcagaactgc attccgcgcg actggcagga cgacgccgcg
     2701 cagtggcgcg ctggcgagat gaacctggcg aactggtgcc agcaactgct ggccaacaaa
     2761 gcgattgtgc cgttgatcca ccactggctg attatccagg gacaacgcag tatgcgcggg
     2821 ctgcgcatga ataccctcgg ctggtttgat tttaaatcgg cgtggtttgc gccgccagat
     2881 ccttaacgcc agctcttgat tgctgcccgg caacaaaatc actacactaa cgccgaactc
     2941 aacggggtgc cgcgctcatg cgcgcgctga gaaaataccc gtcgaacctg atccggataa
     3001 tgccggcgaa gggatttgag gctacctctc aagtcctttg ccactcttta actgaggtgc
     3061 aaagtgttaa aaaaatatct tccgctttta ctcctgtgcg cggcgcctgc tttcgccaaa
     3121 cccgttctca ccgtctatac ctacgactcg ttcgccgccg actgggggcc aggcccggcg
     3181 gtgaaaaaag cgtttgaagc cgattgcaac tgcgagctga aactggtggc gctggaggat
     3241 ggcgtttcgc tgctcaaccg cctgcggatg gaggggaaga acagcaaagc cgatgtggtg
     3301 ttggggctgg acaataatct gctggaggcg gccacgcaaa ctaaactctt tgccaaaagc
     3361 ggcgtggcga atgaggcggt caaggtgccc ggcggctgga aaaacgacac atttgtgccg
     3421 ttcgattacg gctatttcgc ctttgtctac gataaaagca agctgaaaaa tccgccgaaa
     3481 agcctgaaag aactggtcga gagcgatcaa aaatggcggg tgatttatca ggatccgcgt
     3541 accagtacgc cagggctggg gctgttactg tggatgcgca aagtttatgg cgataacgcg
     3601 ccgcaggcct ggcaaaaact ggcggccaaa acggtgacgg tgacgaaagg ctggagcgag
     3661 gcctacggtt tatttctgaa aggtgaaagc gatttggtgc tcagttacac cacctctccg
     3721 gcgtatcaca ttattgaaga gaagaaggac aattacgccg ccgcgaactt cagcgaaggc
     3781 cattacttac aggtagaagt cgcggcgcgt accgtcgcca gtaagcagcc ggaactggcg
     3841 gagaaattcc tcaaatttat ggtttctccg gcgtttcaga acgccatacc caccggcaac
     3901 tggatgtacc cggtagcgga cgtcgcctta cccgcagg
//
LOCUS       DAGWFR010000264         3838 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.267, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000264 DAGWFR010000000
VERSION     DAGWFR010000264.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 3838)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3838)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3838
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.267"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..515)
                     /gene="emrD"
                     /locus_tag="MOX77_004432"
     CDS             complement(<1..515)
                     /gene="emrD"
                     /locus_tag="MOX77_004432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter EmrD"
                     /protein_id="HCA3359810.1"
                     /translation="MKRQRNVNLLLMLVLLVAVGQMAQTIYIPAIADMAQALNVREGA
                     VQSVMAAYLLTYGVSQLFYGPLSDRVGRRPVILVGMSIFMVATLIAMTTHSLTVLIAA
                     SAMQGMGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLDTLWN
                     WRACYAFLLVL"
     gene            complement(718..1578)
                     /locus_tag="MOX77_004433"
                     /pseudo
     CDS             complement(718..1578)
                     /locus_tag="MOX77_004433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462698.3"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
     gene            complement(1671..1760)
                     /gene="tisB"
                     /locus_tag="MOX77_004434"
     CDS             complement(1671..1760)
                     /gene="tisB"
                     /locus_tag="MOX77_004434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_453107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin TisB"
                     /protein_id="HCA3359811.1"
                     /translation="MSVVDITILILKLIVAALQLLDAVLKYLK"
     gene            complement(1757..1871)
                     /locus_tag="MOX77_004435"
                     /pseudo
     CDS             complement(1757..1871)
                     /locus_tag="MOX77_004435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009325922.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            2394..2492
                     /gene="ivbL"
                     /locus_tag="MOX77_004436"
     CDS             2394..2492
                     /gene="ivbL"
                     /locus_tag="MOX77_004436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ilvB operon leader peptide IvbL"
                     /protein_id="HCA3359812.1"
                     /translation="MNPSMLNATLLTTAPSRAVVVVRVVVVVGNAP"
     gene            2599..>3838
                     /locus_tag="MOX77_004437"
     CDS             2599..>3838
                     /locus_tag="MOX77_004437"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase large subunit"
                     /protein_id="HCA3359813.1"
                     /translation="MASSGTTSTPQRFTGAEFIVHFLERQGIRIVTGIPGGSILPVYD
                     ALSQSTQIRHILARHEQGAGFIAQGMARTESKPAVCMACSGPGATNLVTAIADARLDS
                     IPLICITGQVPASMIGTDAFQEVDTYGISIPITKHNYLVRNINELPQVMSDAFRLAQS
                     GRPGPVWIDVPKDVQTATIELDALPSPAEKSPPPEFSAESIREAAAMINAAKRPVLYL
                     GGGVINAPTRVRELAEKAQLPTTMTLMALGMLPKAHPLSLGMLGMHGARSTNFILQEA
                     DLLIVLGARFDDRAIGKTEQFCPNAKIIHVDIDRAELGKIKQPHVAIQADVDDVLAQL
                     IPHIEAQPREAWHQLVADLQQEFPCGIPQENNPLSHYGLINAVAACVDDNAIITTDVG
                     QHQMWTAQAYPLNRPRQWLTS"
BASE COUNT          946 a         1046 c         1050 g          796 t
ORIGIN      
        1 caaagcacca gcaggaaagc gtaacacgcg cgccagttcc acagggtatc cagcaggccg
       61 ccaatcagcg gcgctaacag cgggctgacc agaatcccca tatttaacag gctattggca
      121 tgacgaagtt gcgttccttc atacagatcg cgcgggagcg ttctcgccat tactccgcca
      181 acgccggttc ccatcccttg catggcgctg gcggcaatca acaccgtcaa actatgcgtg
      241 gtcatggcga tcagagtcgc taccataaaa atagacatgc cgacgaggat taccgggcgg
      301 cgcccaaccc ggtcggaaag cgggccgtaa aacagttgcg agacgccgta ggtcaggagg
      361 taagcagcca ttacgctctg gacggcgcct tcccggacgt ttagcgcttg tgccatatcg
      421 gcgatggcgg gaatataaat ggtttgcgcc atctgcccta cggccaccag taacaccaac
      481 atcaacaaca aattgacgtt tctctgcctt ttcatttcgc tgattacttt tcaaaaaaag
      541 aaaaaataag aataacttgc tgcgcattcc cataaatgcg agaggaatct atcacaccag
      601 aaaaagaagg ccagacagca accagcaatg gcagacgaag gaacggcagg atatgtaaac
      661 aaaagcggca acaaatgttg ccgagaatgt gttacgtctg cagctgttat tgggcaatca
      721 tgacagacgg agtaaaatcg ccccgagggc aatcccgccc gccgccacca gacgtagccc
      781 ggccactttc tctttaagca acagccaggc tatcagcgcg ccgaataaaa tcgacgtctc
      841 acgcagcgcg gcgaccaccg ccagcggcgc ctgggtcatg gcccatagcg ccagcccata
      901 agatcccata gtgccaatcc cgccaaaaat gccttttttc cactgttgcg ccagataacg
      961 cgacgcttcc cgccgccgcg caatcatcgc ccaagttaac aggcaggcgc cgttgagaaa
     1021 aaatgaccat agcgtatagc ccagcgccgt ttcggagagt cttacgccgg tcccgtccac
     1081 cagcgtatat ccggcaataa aacaggcgtt agttaatgcc agcacgacac cacgttgaga
     1141 gctggcgcgg ccattacagg ccatcccaag tatcgccatg cagatcactg cgatgccgac
     1201 ctaggccatc gacgacaggc tgtcgccaag aaacagaacg ctaatgagcg ccaccagcag
     1261 cggcgcggtg ccgcgcataa gaggataggt ctggctcatg tccgagacct gataggtttt
     1321 cgccaccagg acggtataca ccacctggag cgcggtagag gccgctaaaa aagggatact
     1381 ggcgtgagct ggctgcggcg agaagggcaa aaggatcaat gccatgaccg ccgcggaacc
     1441 gctgacgccg atcgcggcgt agagcttatc gtttcccgct ttgacaatgg cgttccagct
     1501 ggcatgtagc agcgcggcga acagcaaaat gcagaaaacg gaaagggtca tagcatcagg
     1561 cgtcgttgag ggtgtcataa aaacgtaaca tacccgggaa gcgaaagacc agcggataag
     1621 gtgaaagggg agcggttgcc cgctcccctt cggtgcggct tgaatctgaa ttacttaagg
     1681 tatttcagaa cagcatcaag cagttgcagt gctgcaacaa tgagtttcag gataagaatg
     1741 gtgatatcca ctacgctcat acgcgtctcc tgtggttaag gagcactgcc agccgacgta
     1801 cctttccgct gcctgttgcc agctgttgcg cacgcgatcc cttttgcgag gaatagtgtg
     1861 cgtgttgaca taacacagtg tgctcacgag ggggttaagg cgctgacggc accacccgtt
     1921 tcagccagga cttcgttgcg ccggtttacg atgcggcccc cgcataacac attgtgtcaa
     1981 agacattata gttaagtgct gtataaatga acagtaattt atagacagaa cggagcttct
     2041 gatccatact caaattcatc aaaattcgcg ccgaaattgc gcgttctgca cagaacgcgt
     2101 atacttctgc tgttgacata acacagtgtg cttcgcggct accacccgca ttacgctgta
     2161 agaacctcgc ttcggcgagg ttttttgttt tcaggcattg tgaaacgcgt gatcatcaat
     2221 cccggcgatt accggagggc gctacgctta tcacgcctat actcaaagcg tgtaaattcg
     2281 tagaaaaatg tgatcgctga cgcatttttg tgcagatgaa aatttttccg ttgtcatgct
     2341 gaaagcgctg tgcttgtata aaacgtgtta ataacaaaca gacaaggccc ctaatgaacc
     2401 cttccatgct gaacgcgacc ctactaacaa ctgcgccatc tcgcgcagtg gtcgtcgtgc
     2461 gtgtggtggt ggtcgtcggc aatgcgccgt agggtccgga acacacacga ttccaaaacc
     2521 ccgccggcgc aaaccgggcg gggttttttg tttaagacac cttcccggaa cgtcggctca
     2581 gaataaaagg aatggagcat ggcaagttcg ggcacaacat ctacacctca gcgctttacg
     2641 ggcgcggaat ttatagttca ttttctggag cgccagggga ttcgtatcgt caccggcatt
     2701 cccggcggtt cgatcctccc cgtttacgac gcgttaagcc aaagcacgca aatccgtcat
     2761 attctggcgc gccacgaaca aggcgcgggg tttattgcgc aggggatggc gcggacggag
     2821 agtaaacctg ctgtttgtat ggcctgtagc gggccaggcg cgaccaatct ggtcacggct
     2881 attgccgatg cgcgcctgga ttccattccg ttaatctgca ttaccgggca ggttccggcg
     2941 tccatgatcg gtactgacgc gtttcaggaa gtggatacct acggtatctc tatccccatc
     3001 accaagcaca actatctggt cagaaatatc aatgagctgc ctcaggtgat gagcgatgct
     3061 tttcgtctgg cgcagtcggg gcgtcctggc ccggtgtgga tagacgttcc taaagatgtg
     3121 cagacggcga ccattgagct ggatgcgttg ccgtcgccgg cggaaaaatc acccccgccg
     3181 gagtttagcg cggagagtat ccgcgaggcc gccgcaatga ttaacgcggc gaagcgtccg
     3241 gtgctgtatc tgggcggcgg cgtgatcaat gcgccgacac gcgtgcgcga actggcggaa
     3301 aaagcgcaac tgccgacgac aatgacctta atggcgctgg gaatgctgcc taaggcgcat
     3361 ccgctgtcgt taggaatgct gggaatgcac ggcgcgcgca gtaccaattt tattctgcaa
     3421 gaggccgatt tactgattgt tctgggcgcg cgttttgatg accgggcgat tggcaaaacg
     3481 gagcagtttt gtccgaacgc caaaatcatc catgtggata tcgatcgcgc cgagttaggc
     3541 aaaattaagc agccgcatgt ggctattcag gcggatgtcg atgatgtact ggcacagtta
     3601 attccccata tcgaggcaca gccgcgggaa gcatggcatc agttggtggc ggacttgcag
     3661 caagaattcc cttgcggtat tccccaggaa aataacccgc ttagtcacta tgggctgatt
     3721 aacgcggtcg cagcctgtgt ggacgacaac gcgattatta ccactgacgt aggtcagcat
     3781 cagatgtgga ccgcgcaggc ttatccgctc aaccgtccgc gtcagtggct gacttccg
//
LOCUS       DAGWFR010000265         3822 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.268, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000265 DAGWFR010000000
VERSION     DAGWFR010000265.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 3822)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3822)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3822
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.268"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..1717)
                     /locus_tag="MOX77_004438"
     CDS             complement(<1..1717)
                     /locus_tag="MOX77_004438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase subunit alpha"
                     /protein_id="HCA3359814.1"
                     /translation="MSKLLDRFRYFKQKGDTFADGHGQMMHTNRDWEDSYRQRWQFDK
                     IVRSTHGVNCTGSCSWKIYVKNGLVTWETQQTDYPRTRPDLPNHEPRGASYSWYLYSA
                     NRLKYPLVRKRLIELWREALSRHSDPVLAWESIMNDPQKCQSYKQVRGHGGFIRSNWK
                     ELNQLIAAANVWTIKTYGPDRVAGFSPIPAMSMVSYAAGTRYLSLLGGTCLSFYDWYC
                     DLPPASPMTWGEQTDVPESADWYNSAYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTIA
                     ITPDYSEVAKLCDQWLAPKQGTDSALAMAMGHVILKEFHLDNPSDYFLNYCRRYTDMP
                     MLVLLDERADGSYVPGRMMRASDLVDGLGEANNPEWKTVALNSTGELVAPNGSIGFRW
                     GEKGKWNLEPVAAGVETELSLSLLGQHDDVAGVAFPYFGDNENPHFRSVRQEPVLVRQ
                     LPVKRLALADGSERMVVSVYDLVLANYGLDRGLDDGHSANNYNDVKAYTPAWGEQITG
                     VPRRHIETIAREFAETAHKTHGRSMIILGAGVNHWYHMDMNYRGMINMLVFCGCVGQT
                     GGGWAH"
     gene            complement(1809..3197)
                     /locus_tag="MOX77_004439"
     CDS             complement(1809..3197)
                     /locus_tag="MOX77_004439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NarK family nitrate/nitrite MFS transporter"
                     /protein_id="HCA3359815.1"
                     /translation="MTRQNENYNRYLLSDWRPENPAFWENKGKGIARRNLWISVSCLL
                     LAFCVWMLFSAVAVNLNKIGFDFTTDQLFLLTALPSLSGAILRVPYSFMVPLFGGRKW
                     TVLSTVILIIPCAWLGFAVQNPATPFGVFILIALLCGFAGANFASSMGNISFFFPKAR
                     QGSALGINDGLGNLGVSVMQLIAPLVIFLPIFTFLGVRGVPQPDGSLLALTNAAWIWV
                     PLLAVATLAAWFGMNDIGSSKASVASQLPVLKRLHLWLLSLLYLATFGSFIGFSAGFA
                     MLAKTQFPDVNILQLAFFGPFIGALARSAGGVISDKFGGVRVTLINFIFMALFTALLF
                     LTLPGSGAGSFSAFYLVFMGLFLTAGLGSGSTFQMIAVIFRQITLYNVKLRGGSDEQA
                     QREAVTDTAAALGFISAIGAVGGFFIPKAFGTSLALTGSPVGAMKIFLLFYIACVLLT
                     WLVYGRLKPKQQ"
     gene            complement(3412..>3822)
                     /locus_tag="MOX77_004440"
     CDS             complement(3412..>3822)
                     /locus_tag="MOX77_004440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family transcriptional regulator"
                     /protein_id="HCA3359816.1"
                     /translation="ALAFVHLIRTLLDAGQVPPPATWRARLHAMLGSEDGGFEPYIKL
                     WREAQILADRDPHIRDAYLLTMQMWHEETVTIIEQGKQAGEFTFTANATDIAWRLIAL
                     VCGLDGMYVLGIPEMADPAFKYHLDRMITLELFA"
BASE COUNT          987 a         1020 c          984 g          831 t
ORIGIN      
        1 agtgcgccca gccgccaccg gtttgtccaa cacagccgca gaacaccagc atgttaatca
       61 tcccacggta attcatatcc atgtgatacc agtgattcac tcccgcgccg aggatgatca
      121 tcgaacgacc gtgagtttta tgggcggtct cggcaaattc acgcgcaata gtttcgatat
      181 gtcgacgcgg cacgccggta atctgttcgc cccaggccgg cgtgtaggct ttgacatcgt
      241 tataattatt ggcgctatgg ccgtcatcca gaccacgatc cagcccataa ttagccagca
      301 ccagatcgta aacgctgacg accatccgct cgctaccgtc cgccagagcc aggcgtttca
      361 ccggtaactg acgtaccagc accggttcct gccgcacgct gcgaaaatgt gggttttcgt
      421 tgtcgccaaa ataggggaag gcgacacccg ccacgtcatc atgctgaccg agtaaagaga
      481 gcgacagttc agtttcgacg cccgccgcca ccggttccag gttccatttt cccttttcgc
      541 cccagcgaaa accgatagaa ccgttgggcg cgaccagttc gcccgtactg ttgagcgcga
      601 cggttttcca ttccggatta ttggcttctc ccagtccatc caccagatcc gacgcgcgca
      661 tcatacgccc cggtacataa ctgccgtctg cgcgctcatc caacaggact aacatcggca
      721 tgtcggtata acggcggcaa tagttaagga aatagtcgct gggattatcg agatgaaact
      781 ctttcaaaat gacgtgaccc atggccatcg ccagcgcgct gtcggtacct tgctttggcg
      841 ccagccactg atcgcacagt ttagcgactt cggaatagtc cggggtgatg gcaattgtct
      901 tggtgccttt gtagcgcact tcggtaaaga agtgggcgtc cggggtacgc gtttgcggca
      961 cgttagagcc ccaggcaata atgtaggctg agttatacca gtcggcggac tccggcacgt
     1021 cagtctgctc gccccaggtc attggcgacg cgggcggaag atcgcaatac cagtcataga
     1081 agctcagaca agtaccgcca agcaatgaca gataacgtgt tccggcggcg taagaaacca
     1141 tcgacatcgc cggaataggt gaaaaacccg ccacacgatc cgggccatag gttttgattg
     1201 tccagacgtt agcggcggca atgagctgat tcagctcttt ccagttcgaa cgaataaagc
     1261 cgccatgtcc gcgcacctgt ttgtaacttt ggcatttttg cgggtcgttc attatagatt
     1321 cccatgccag caccggatcg ctgtggcggg aaagggcctc tcgccacagt tctatcagcc
     1381 gcttacgcac cagagggtat ttcaaacgat tggcgctata gagataccag gagtagctgg
     1441 cgccgcgcgg ttcatggttc ggtaaatcgg gacgtgtgcg cgggtagtcg gtttgctggg
     1501 tttcccacgt caccagacca tttttgacat aaattttcca actacaggag cccgtgcagt
     1561 tgacgccgtg ggttgagcgc acgatcttat caaactgcca gcgctggcga taactgtctt
     1621 cccagtcgcg gttggtatgc atcatctgac catggccgtc agcaaaggta tcgccttttt
     1681 gtttaaagta acgaaagcga tccaacagtt tactcatgac atttctcctg cttcgataaa
     1741 ttttccgcca tcctgtcgat ttggcgttaa accattaccg gatggccgtc ctacaagtgc
     1801 gtatgttgtt attgttgttt aggcttaaga cgcccgtaga ccagccaggt cagcaggacg
     1861 caagcgatgt aaaacagcaa aaagattttc atggcgccca ccggcgagcc ggtcaaggcc
     1921 aaagaggtgc caaacgcttt tggaataaag aagccgccca cagcgccaat agcggagata
     1981 aaaccgagcg cggcggcggt atccgtcacc gcttcgcgct gcgcctgctc atcgctcccg
     2041 ccgcgcagtt tgacgttgta gagcgtgatc tgccggaaga tcaccgcaat catctggaag
     2101 gtagaaccgc tgccgagacc cgctgtcaaa aacaggccca taaaaacaag atagaacgcg
     2161 ctaaagctgc ctgcgccgga gcctggcagc gtgaggaata gcagggcggt aaacagcgcc
     2221 ataaagataa aattaatgag cgtgacgcga acgccgccga atttatcgga gatcacgccg
     2281 cctgccgatc gcgccagcgc gccgataaag gggccaaaga acgccagttg cagaatgttt
     2341 acgtcgggaa attgcgtttt ggcgagcatg gcgaaacctg cggaaaagcc gatgaatgac
     2401 ccgaatgtcg ccaggtacag caggctaagc agccacaggt gcagacgttt tagcaccggc
     2461 aattgcgagg cgacagacgc ttttgaactg ccgatatcgt tcataccaaa ccaggcggca
     2521 agcgtcgcaa cagccagtaa cggcacccag atccaggcgg cgttagtgag ggcgagcagg
     2581 gagccatcag gttgcggcac gccccggacg cctaaaaaag taaatatcgg caaaaaaata
     2641 accagcggcg caatcaactg catcacactg acgccaagat ttcccagtcc gtcgttaata
     2701 cccaacgcgc taccttgtct ggcttttgga aagaaaaaac tgatgttgcc catactggac
     2761 gcgaaatttg cccccgcaaa accgcacaac agagcgatga gtataaatac cccgaaaggg
     2821 gtggcaggat tttgcacggc gaatcccagc caggcgcaag gaataatcaa tattacggta
     2881 cttaatacgg tccatttacg accaccaaac agtggtacca taaaggagta gggaacgcgt
     2941 aatattgcgc cggaaagaga aggtaatgcg gttaataaaa agagttggtc ggtcgtaaaa
     3001 tcaaatccaa ttttattgag gttgacggca acagcgctaa acaacatcca gacgcaaaat
     3061 gcaaggagca aacaacttac tgaaatccat aagtttcttc tggcgatgcc tttcccttta
     3121 ttctcccaga aggctggatt ttcgggtcgc cagtcactca agagataacg gttataattc
     3181 tcgttttgtc gtgtcatttt acccctcaca tgcgcatatc atttgaaaaa aaacacaaaa
     3241 aagagacaga gcgtcacgcg ctcttttgag aacttattga agttttttta gaatattgag
     3301 tgaaagaata gataaaaaac caggccagcg cggcgcgaag aggagatatg atgtttctta
     3361 attgttacta tttgtaaatt aaaagcgatt tttattaaat tatttgtaac tttacgcaaa
     3421 gagttcaagc gtaatcatac gatccagatg gtatttaaac gcgggatcgg ccatttccgg
     3481 aatacccagc acatacatac cgtccagccc gcacaccagt gcgataagcc gccaggcgat
     3541 atccgtggcg ttagcagtaa acgtaaattc tcctgcctgt ttgccctgct cgataattgt
     3601 gaccgtttcc tcatgccaca tctgcatcgt gaggagataa gcatctctga tgtgcgggtc
     3661 ccggtcggcc agaatttgcg cctctcgcca caattttatg taaggctcaa agccgccgtc
     3721 ttcgctaccc aacatagcgt gaagccgtgc acgccaggtg gcgggcggcg gaacttgccc
     3781 ggcatcgagc agggtacgga tcaaatggac aaaggccagc gc
//
LOCUS       DAGWFR010000266         3760 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.269, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000266 DAGWFR010000000
VERSION     DAGWFR010000266.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 3760)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3760)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3760
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.269"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..783)
                     /locus_tag="MOX77_004441"
     CDS             complement(<1..783)
                     /locus_tag="MOX77_004441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HCA3359817.1"
                     /translation="MGRVAPVAIVLAFALFHHQPRGAEALPMITSEGLATDQMLPSLD
                     GSAAELPLSAAAPGNLTLNDAVNRAVNWHPSIREAVGKLLAQNEQIEVAKSKYYPQVS
                     AGVNNGYSNTYTDHGYSPSLVLSVSQMLYDFGKVASQVRAETAGAAQQQANVLLSIDT
                     VAHETANAIVQTQSWQQMVEAAEEQLVALDSIGKLIRQRSDEGATSLSDVVQTEARIE
                     SARSQLAQYQANLDSAKASLMSWLGWNSLNGINNDFPAKLARS"
     gene            complement(847..>3760)
                     /gene="bapA"
                     /locus_tag="MOX77_004442"
     CDS             complement(847..>3760)
                     /gene="bapA"
                     /locus_tag="MOX77_004442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001237670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="biofilm-associated protein BapA"
                     /protein_id="HCA3359818.1"
                     /translation="IVDTLAPGTPSGTLSADGGSLSGQAEANSTVTVTLAGGVTLTTT
                     AGSNGAWSLTLPTKQIEGQLINVTATDAAGNASGTLGITAPILPLAARDNITSLDLTS
                     TAVTSTQNYSDYGLLLVGALGNVASVLGNDTAQVEFTIAEGGTGDVTIDAAATGIVLS
                     LLSTQEIVVQRYDTSLGTWTTIVNTAVGDFANLLTLTGSGVTLNLNGLGEGQYRVLTY
                     NTSLLATGSYTSLDVDVHQTSAGIISGPTISTGNVMADDTAPTGTTVTAITNANGVST
                     PVGAGGVDILGQYGTLHINQDGSYTYTLTKPTAGYGHKESFTYTITQNGVGSSAAQLV
                     INLGPAPVPGSVIATDNNASLVFDTHVSYVNNGPSTQSGVTVLSVGLGNVLNANLLDD
                     MTNPIIFNVEEGATRTMTLQGTVGGVSLVSTFDLYVYRFNDAIQQYEQFRVQKGWINT
                     LLLAGQSQPLTLTLPGGEYLFVLNTASGISVLTGYTLAISQDHTYAVDSITANTTGNV
                     LTNDVAPTDALLTEVNGVAIAATGTTEVNGLYGSLIIDARGNYTYTLKNGVGADSIKT
                     PDSFIYTLKAPNGDTDTASLNITPTARALDAINDVSDTLSVATLQDTAAWLDSSVGSA
                     SWGLLGKSGSGSGTFDVATGTVLKGASLVFDVSTLITLGNLNISWAIQENGTVIRNGT
                     VPVANITLGSATVTVNLSGLELDAGTYTLNFTGTNTLAGAATITPRVIGTTVDLDNFE
                     TSGTHTVLGNIFDGSDAAGAMDQLNTVNTRLSISGYNGSAATLDAAANTTSATIQGHY
                     GTLQINLDGAYTYTLNNGVAMSSITSKEVFTYQLDDKIGHTDSATLTIDMAPQIVSTN
                     QNDVLIGSAYGDTLIYHLLNGADATGGNGADRWQNFSTAQGDKIDIHELLTGWDHQAA
                     TLGNFVQVHTSGANTVISVDRDGAGSAFKSTDLVTLENVQLTLNDLLQNNHLITGG"
BASE COUNT          725 a         1029 c         1118 g          888 t
ORIGIN      
        1 gctgcgagcg agtttcgccg ggaagtcatt attgatgccg ttaagcgaat tccagcccag
       61 ccagctcatc agtgaggctt tcgcactgtc gagattggcc tgatactgcg ccagttgcga
      121 gcgggcggat tcgattctgg cttcggtttg caccacgtca gatagcgacg tagcgccttc
      181 atcgctgcgc tgccggataa gtttaccgat gctgtccagc gcgacgagct gttcttccgc
      241 cgcttctacc atttgctgcc agctctgcgt ttgtacaatg gcgttggcgg tttcgtgcgc
      301 gacggtatca atactgagca acacgttggc ctgttgctgt gctgcgcctg cggtttcggc
      361 gcgaacctgg cttgccactt tgccgaagtc ataaagcatt tgcgataccg acagcaccag
      421 cgaggggcta tacccgtgat cggtgtaggt attgctgtac ccattgttca cgccagcgct
      481 gacttgcgga taatatttcg atttggcgac ctctatttgt tcattctgtg cgagcagttt
      541 gccgacggct tcgcgaatag aaggatgcca gttaacggcg cgattgaccg cgtcattgag
      601 cgtcaggttg cccggcgcgg cggcgctgag cggcaactca gcggcggagc catccagcga
      661 aggaagcatc tggtccgttg ctaatccttc ggatgtaatc attggcagcg cttctgcgcc
      721 ccggggctgg tgatgaaaca aagcaaatgc cagtacgatg gcgacaggcg cgactcttcc
      781 catagtttat cccttttaaa tatcaccgct tgttgccccg aacgtcgtgg cgttcggggc
      841 tttttatcaa ccgccggtta tcaggtggtt gttctgcaac agatcattta gcgtgagctg
      901 cacattctcc aaagtgacaa ggtcagttga tttaaacgcg ctgccggcgc cgtcgcgatc
      961 gacggatatc accgtattgg cgccgctggt atgaacctga acaaagttac ctagcgtcgc
     1021 cgcctggtga tcccagccgg tcagcagttc gtggatatcg atcttgtcgc cctgcgcggt
     1081 ggagaagttt tgccagcgat cggcgccgtt gccgccggtc gcgtccgcgc cgtttaacag
     1141 gtgataaatc agcgtatcgc cataggcgga gccgataaga acatcgtttt ggttggtact
     1201 gacgatttgc ggcgccatat caatggtcaa tgtggcgcta tccgtatgac ctatcttgtc
     1261 atccagttga taggtaaaga cctctttact ggtgatggac gacatcgcga cgccattatt
     1321 cagggtgtag gtgtaagcgc catcgaggtt aatttgcaat gtgccgtaat gtccctgaat
     1381 cgtggcgctg gtggtattcg ccgcggcgtc cagcgtggcg gcgctgccgt tatacccgct
     1441 aatgctcagg cgagtattca ccgtattaag ctgatccatc gcccccgccg cgtcgctgcc
     1501 gtcaaaaata ttgccgagaa cggtatgcgt tccggacgtt tcaaaattat ccagatcgac
     1561 ggtggtgccg atgacgcgtg gcgtgattgt cgccgccccg gccagggtat tggtgccggt
     1621 aaagttaagc gtgtacgttc cggcatccag ctccaggccg ctcaggttga cggtcaccgt
     1681 cgcgctgccc agcgtgatat tcgccaccgg gacggttccg ttgcgtatga cggttccgtt
     1741 ctcctgaatg gcccagctaa tattcagatt gcccagcgta atgagcgtgg agacatcaaa
     1801 gaccagtgac gcgcctttaa gtacggtgcc cgttgcaacg tcaaaggtgc cgctcccgct
     1861 gcccgatttg ccgagtagcc cccaactggc gctgccgacg ctggagtcca gccaggcagc
     1921 ggtatcctga agcgtggcga cgctaagggt atcgctgaca tcattaatcg catccagcgc
     1981 cctggcggtt ggcgtgatat tgagcgaggc cgtatcggta tcgccgtttg gcgctttgag
     2041 cgtatagata aagctgtccg gcgttttaat gctgtcggcg ccgacgccgt tcttcagcgt
     2101 gtaggtatag ttgcctcttg cgtcaatgat gagcgagcca tacagcccat ttacctccgt
     2161 cgtgccggtc gccgcaatcg ccacgccgtt tacttcagtg aggagggcgt ccgtaggggc
     2221 gacatcattg gtcagtacgt tgccggtggt gttggcggtg atactgtcaa cggcataggt
     2281 gtggtcctgg gaaatcgcca acgtatagcc agtgaggacg ctaatgccgc tggcggtatt
     2341 cagcacgaac aagtattcgc cgccaggcaa cgtcagggtc agcggctggg actgtccggc
     2401 taacagcagg gtgttaatcc agcccttttg cacccggaac tgctcatatt gttgaatggc
     2461 atcgttgaag cgataaacgt acagatcgaa cgtggaaacc agtgagacgc cgccgacggt
     2521 tccctgtaac gtcatggttc gcgtagcgcc ttcttcaacg ttaaagatga tcggattagt
     2581 catatcatca agcagattcg cgttcagtac attaccaagt ccgacgctta ataccgtgac
     2641 gccgctttgt gtcgaggggc cgttgttgac gtagctaacg tgagtatcaa agaccagcga
     2701 ggcgttattg tctgtcgcta tcacgctgcc cggtacaggc gcgggaccca aattaataac
     2761 cagttgcgcg gcgctgctac cgacgccatt ctgggtgatg gtgtaggtga agctctcttt
     2821 atgtccgtat cccgccgtgg gcttagtcag cgtgtaggtg taactgccat cctgattaat
     2881 gtgcagcgtg ccgtattgcc ccaggatatc cacgccgccc gcgccgaccg gcgtactgac
     2941 gccgttggcg ttggtgatgg cggtgaccgt ggtgcccgtc ggcgcggtat catcagccat
     3001 gacgttgccg gtactgatgg ttggcccgct aataatacct gcgctggtct ggtgtacatc
     3061 gacatccagg ctggtatatg acccggtggc gagcagactg gtgttataag tgagtacccg
     3121 gtactggcct tcgcccagtc cgttcaggtt cagggtaacg ccgctcccgg tcagggtaag
     3181 caaattcgcg aagtcgccaa cggcggtgtt gacgatcgtc gtccaggtgc cgaggctggt
     3241 gtcatagcgc tgtaccacta tctcctgagt gctgagcagc gaaagcacga ttcccgttgc
     3301 ggcggcatcg atggtgacgt cgcccgtacc accttcagca atggtgaact caacctgagc
     3361 ggtatcgtta cccaaaaccg aggcgacatt gccaagcgcg ccaaccagca gcaggccgta
     3421 atccgaatag ttttgcgtgc tggtgacggc ggtagaggtc agatcaagac tggttatgtt
     3481 atcccttgcc gccagcggca gaatcggcgc ggtaatgcct aacgtgccgg aggcgttacc
     3541 cgcagcgtca gtggccgtca cgttaatgag ttgaccttca atttgttttg tcggcaaggt
     3601 gagagaccat gcgccgttgc tgccggcggt ggtggtgagc gtcacgcccc ccgccagcgt
     3661 tacggttacg gtgctgtttg cctcagcctg tccggaaagt gaaccgccat cggcgctgag
     3721 cgtacctgac ggcgtaccgg gcgccagcgt atcgacaatc
//
LOCUS       DAGWFR010000267         3760 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.270, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000267 DAGWFR010000000
VERSION     DAGWFR010000267.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 3760)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3760)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3760
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.270"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..384)
                     /gene="cysG"
                     /locus_tag="MOX77_004443"
     CDS             complement(<1..384)
                     /gene="cysG"
                     /locus_tag="MOX77_004443"
                     /EC_number="1.3.1.76"
                     /EC_number="2.1.1.107"
                     /EC_number="4.99.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462380.1"
                     /note="multifunction enzyme consisting of uroporphyrin-III
                     C-methyltransferase, precorrin-2 dehydrogenase and
                     sirohydrochlorin ferrochelatase; catalyzes the methylation
                     of uroporphyrinogen III to form precorrin-2, then
                     catalyzes formation of sirohydrochlorin from precorrin-2
                     and finally catalyzed the formation of siroheme from
                     sirohydrochlorin; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siroheme synthase CysG"
                     /protein_id="HCA3359819.1"
                     /translation="MDHLPIFCQLRDRDCLIVGGGDVAERKARLLLEAGARLTVNALT
                     FIPQFTVWVNEGMLTLVEGPFDETLLDSCWLAIAATDDDTVNQRVSEAAESRRIFCNV
                     VDAPKAASFIMPSIIDRSPLMVAVSS"
     gene            complement(396..1205)
                     /gene="nirC"
                     /locus_tag="MOX77_004444"
     CDS             complement(396..1205)
                     /gene="nirC"
                     /locus_tag="MOX77_004444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite transporter NirC"
                     /protein_id="HCA3359820.1"
                     /translation="MFTDTINKCAANAARIARLSANNPLGFWVSSAMAGAYVGLGIIL
                     IFTLGNLLDPSVRPLVMGATFGIALTLVIIAGSELFTGHTMFLTLGVKAGTISHGQMW
                     AILPQTWLGNLVGSVFVALLYSWGGGSLLPVDTSIVHSVALAKTTAPATVLFFKGALC
                     NWLVCLAIWMAIRTEGTAKFLAIWWCLLAFIASGYEHSVANMTLFALSWFGHHSDAYT
                     LSGIGHNLLWVTLGNTLSGVVFMGLGYWYATPKSERPVPQKTNQIKATANH"
     gene            complement(1387..1713)
                     /gene="nirD"
                     /locus_tag="MOX77_004445"
     CDS             complement(1387..1713)
                     /gene="nirD"
                     /locus_tag="MOX77_004445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite reductase small subunit NirD"
                     /protein_id="HCA3359821.1"
                     /translation="MSQWQNICKIDDILPGTGVCALSGGEQVAIFRPYHSDQVFAISN
                     IDPFFEASVLSRGLIAEHQGELWVASPLKKQRFRLSDGLCMEDEQFSVKHYDARVKDG
                     VVQLRG"
     gene            complement(1710..>3760)
                     /gene="nirB"
                     /locus_tag="MOX77_004446"
     CDS             complement(1710..>3760)
                     /gene="nirB"
                     /locus_tag="MOX77_004446"
                     /EC_number="1.7.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="nitrite reductase large subunit"
                     /protein_id="HCA3359822.1"
                     /translation="NLGVETHVIEFAPMLMAEQLDQMGGEQLRRKIESMGVRVHTSKN
                     TQEIVQQGNEARKTMRFADGSELEVDFIVFSTGIRPRDKLATQCGLAVAQRGGIVIND
                     TCQTSDPDIYAIGECASWNNRVYGLVAPGYKMAQVAVDHILGSENAFEGADLSAKLKL
                     LGVDVGGIGDAHGRTPGARSYVYLDESKEVYKRLIVSEDNKTLLGAVLVGDTSDYGNL
                     LQLVLNAIELPENPDSLILPSHASSGKPAIGVDKLPDSAQICSCFDVTKGDLIAAINK
                     GCHTVAALKAETKAGTGCGGCIPLVTQVLNAELAKQGIEVNNNLCEHFAYSRQELFHL
                     IRVEGIKTFEELLTKHGKGYGCEVCKPTVGSLLASCWNEYILKPQHTPLQDTNDNFLA
                     NIQKDGTYSVIPRSAGGEITPEGLVAVGRIAREFNLYTKITGSQRIGLFGAQKDDLPE
                     IWRQLIEAGFETGHAYAKALRMAKTCVGSTWCRYGVGDSVGFGVELENRYKGIRTPHK
                     MKFGVSGCTRECAEAQGKDVGIIATEKGWNLYVCGNGGMKPRHADLLAADLDRDTLIK
                     YLDRFMMFYIRTADKLTRTAPWLDNLEGGIEYLKSVIIDDKLGLNEHLEEEMARLRAA
                     VVCEWTETVNTPAAQVRFKHFINSDKRDPNVQVVPEREQHRPATPYERIPVTLVEENA
                     "
BASE COUNT          824 a         1079 c         1029 g          828 t
ORIGIN      
        1 ggaggagacg gcgaccatca gcggcgagcg gtcgataatg gagggcatga taaagctggc
       61 ggctttcggc gcatccacca cgttgcagaa gatacggcgt gattccgccg cttcgctgac
      121 gcgctggttg acggtatcgt cgtcagtggc cgcgatcgcc agccaacacg agtcgagaag
      181 cgtttcgtcg aacggcccct caaccagagt caacatgcct tcatttaccc atacggtgaa
      241 ctgcggaata aatgttagcg cattgaccgt taaacgtgcg cctgcttcca gcagtaaccg
      301 tgctttgcgt tctgcgacat cgccaccgcc gacgatcaga cagtcgcggt cgcgcaattg
      361 acaaaatata ggcaaatggt ccacgacatt accccttaat ggttggctgt agccttaatt
      421 tggttggttt tttgcggaac agggcgctcc gatttcggcg tagcatacca ataacccaat
      481 cccatgaaca cgacgccgga caaagtattg cccagagtga cccataacag attgtgtccg
      541 attccggaca gggtataggc atcgctgtga tggccaaacc aggagagggc gaacagcgtc
      601 atattcgcga cggagtgctc gtagccggaa gcgataaacg ccagcagaca ccaccagata
      661 gcaagaaatt ttgccgtgcc ttcggtgcgg atcgccatcc agattgccag acaaaccagc
      721 cagttacaca gcgcgccttt gaagaacagt accgtggcgg gcgcggtggt tttcgccagc
      781 gcgactgagt gaacgatact ggtatcgacc ggcaacaaac tgccgccgcc ccagctgtaa
      841 agcagggcga caaacacgga accaaccagg ttgccgagcc aggtttgcgg caggatagcc
      901 cacatttgac cgtggctgat ggtgcccgct ttgacgccca gcgtcaggaa catggtgtgg
      961 ccggtaaaca gttcggaacc ggcgatgatg accagcgtta aggcgatacc gaaggtggct
     1021 cccatcacca aaggacgcac ggacgggtcg agcagattgc cgagggtgaa aataagaatg
     1081 atgccgagac cgacataagc cccggccatt gccgaactga cccagaagcc gagcggatta
     1141 ttcgccgaca ggcgtgcgat gcgcgcagcg ttagccgcac acttattaat agtgtctgta
     1201 aacatttgat tatccttgaa gtataaaaaa caaaaaaatc gtaaccgtag gccggataag
     1261 gcgtttatgc cgccatccgg caatgtgctt ttgcaattgc ctgatggcgc tacgcttatc
     1321 aggcctacca ataaaagacc tacaaatacg tcaaaaaagg ggaggcgttg cgcctcccaa
     1381 aaataattaa ccgcgcaact gcaccacgcc gtcttttacc cgcgcgtcgt aatgcttcac
     1441 agagaactgc tcatcttcca tgcacagccc gtcgcttaaa cgaaagcgct gctttttcaa
     1501 cgggctggcg acccacagtt cgccctggtg ttccgcaatc agcccacgag acagcacact
     1561 ggcctcaaag aacgggtcga tgttgctgat cgcaaacacc tgatcgctat ggtaaggacg
     1621 gaaaatcgcc acctgctcgc cgcctgacag cgcgcagacg ccggttcccg gcaggatgtc
     1681 atcaattttg cagatgtttt gccactggct catgcgtttt cctccaccag agtgaccggg
     1741 atgcgttcat acggcgtggc cggacgatgc tgttcgcgtt caggcacaac ctggacattt
     1801 gggtcgcgtt tgtcgctgtt gatgaagtgt ttgaaacgaa cctgcgccgc tggcgtgttg
     1861 acggtctccg tccactcgca gaccaccgct gcgcgcaggc gcgccatctc ttcttccaga
     1921 tgttcgttca ggcccagctt atcgtcgata atgaccgact tcagatattc gatgccgcct
     1981 tccaggttat ccagccacgg cgcggtacgc gtcagcttat cggcggtacg gatgtagaac
     2041 atcataaagc ggtcgaggta cttgatcagc gtgtcgcgat cgagatcggc tgccagcaga
     2101 tccgcatgac gcggtttcat cccgccgtta ccgcaaacgt acaggttcca gcctttctca
     2161 gtggcgatga taccgacatc tttaccctgt gcttccgcac attcacgggt acagccggag
     2221 acgccgaatt tcattttgtg cggggtacga atgcctttgt agcggttttc cagctccacg
     2281 ccgaaaccga cgctgtcgcc cacgccgtag cggcaccagg tgctgccgac gcaggttttc
     2341 gccatccgca gcgctttggc gtacgcgtga ccggtttcga aaccggcttc aatcaactga
     2401 cgccagattt ccggcagatc gtctttttgc gcgccgaaca gaccgatacg ctgagaaccg
     2461 gtgattttgg tatagaggtt aaactcgcgg gcgatacgac ccacggccac cagaccttcc
     2521 ggcgtgattt caccacccgc cgagcgcggg atcaccgagt aggtgccgtc tttctgaata
     2581 ttcgctagga agttatcgtt agtatcctgt agcggcgtgt gctgcggttt gaggatgtat
     2641 tcgttccagc acgacgccag cagcgaaccg acggttggct tacacacttc gcagccgtag
     2701 cctttaccgt gtttcgtcag cagttcttca aaggttttga taccttccac gcggattaag
     2761 tggaacagtt cctgacgaga ataagcaaag tgctcgcaca ggttgttgtt gacttcaata
     2821 ccctgtttcg ccagttcggc gttcagtacc tgcgtcacca gcgggatgca gccgccgcag
     2881 ccggttccgg ctttggtttc cgctttcagc gctgccacgg tatggcagcc tttattgata
     2941 gcagcgatca gatcgccttt agtcacatcg aagcaggagc agatctgcgc gctgtccggc
     3001 agtttatcca cgccgatagc gggtttacca ctgctcgcgt gcgacggcag gatcagcgaa
     3061 tccgggtttt ccggcagttc gatggcgttc agtaccagtt gcagcaaatt gccgtaatcg
     3121 ctggtgtcgc cgaccagtac tgcgccgagc agcgttttgt tatcttcgct gacaataaga
     3181 cgtttgtaga cttctttgct ttcatcgagg taaacgtagc tacgcgcgcc cggcgtgcgg
     3241 ccatgcgcat cgccaatccc gccgacgtcc acgcccagca gcttcagttt ggcgctgaga
     3301 tccgcgcctt caaaggcgtt ttcactgccg aggatatggt caacggcgac ctgggccatt
     3361 ttatagcccg gtgcgaccag accgtaaacg cggttgttcc aactggcgca ctcgccgata
     3421 gcgtagatat ccgggtcgga cgtctggcag gtgtcgttaa tcacgatccc gccgcgctgc
     3481 gcgacggcca gaccgcactg ggtagccagc ttgtcgcggg ggcgaatacc ggtagagaag
     3541 acgataaaat cgacttccaa ctcgctgcca tcggcaaaac gcatagtctt acgcgcttcg
     3601 ttaccctgct gaacaatctc ttgcgtgttt ttactggtgt gtacacgcac gcccatgctt
     3661 tcgatcttgc gacgtagctg ctcgccgccc atttgatcga gttgttccgc catcagcatt
     3721 ggcgcaaatt caatgacgtg cgtttccacg ccgaggtttt
//
LOCUS       DAGWFR010000268         3692 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.271, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000268 DAGWFR010000000
VERSION     DAGWFR010000268.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 3692)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3692)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3692
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.271"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..967)
                     /locus_tag="MOX77_004447"
     CDS             complement(<1..967)
                     /locus_tag="MOX77_004447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntP family permease"
                     /protein_id="HCA3359823.1"
                     /translation="MTSLPTPIIGLIVAVFVLVWLVLRTRVHALIAMLAAACIAGLLG
                     GMGIDKTLSVITSGFGTTLGSIGLVIGLGVMMGRLLEVSGAAERIAWSFIKWLGKRRE
                     EWALAITGYIVSIPIFVDSAFVILYPVAKALAKSGKRSLLTLGVALAGGLVVTHHTVP
                     PTPGPLGVAGIFNVDIGAMLLTGMALAVPCVIGIVFYAQWLDKRYPDFVPRTLNADEV
                     NAALEQYNKEKEQKDLPSLTLSLLPIVVPIVLIFLKAICSTLATVEGWSGLATHPVVQ
                     AINFVGSPVIALAISVLLAVYTLVPRMDKHTTAERLEEGLQSAGII"
     gene            complement(964..1914)
                     /locus_tag="MOX77_004448"
     CDS             complement(964..1914)
                     /locus_tag="MOX77_004448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HCA3359824.1"
                     /translation="MQIIITGGGGFLGQKLASALLNSSLAFNELLLVDLKMPARLSDS
                     PRLRCLEADLTQPGVLENVITANTSVVYHLAAIVSSHAEDDFDLGWKVNLDLTRQLLE
                     ACRRQPQKIRFVFSSSLAVYGGTLPECVTDTTALTPRSSYGAQKAACELLVNDYTRKG
                     YVDGLALRLPTICVRPGKLNRAASSFVSAIIREPLQGETTICPVSESLRLWISSPATV
                     IHNLSLAATLPAPGEASSINLPGISVTVGEMLETLRQAGGQAARDRVTHQRDEGVEKI
                     VASWPGRIDNQRALALGFVADKRFDDIIERFRQDDMEGRS"
     gene            complement(1954..2730)
                     /locus_tag="MOX77_004449"
     CDS             complement(1954..2730)
                     /locus_tag="MOX77_004449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HCA3359825.1"
                     /translation="MPRFAADLSMMFTEVPFIERFAAAAEAGFQAVEFLFPYGFAASE
                     IKAQLSRHDLTLALFNTSAGDTAAGEWGRAALPGREHDARADIDLALEYALALECEQV
                     HIMAGVVPDGADGARYRATFIDNLRYAAGRFAAHDKRILIEALSPGVKPGYLFSSQYQ
                     ALGIAEEVDRPNVFIQLDTFHAQKVDGNLSHLIREYAGRYAHVQIASLPDRHEPDDGE
                     INYPWLFRLFDDVGYCGWIGCEYQPRNTTQEGLGWFNAWR"
     gene            complement(2735..3373)
                     /locus_tag="MOX77_004450"
     CDS             complement(2735..3373)
                     /locus_tag="MOX77_004450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase"
                     /protein_id="HCA3359826.1"
                     /translation="MTILAKEEHALREEMVRIAASFFQRGYATGSAGNLSLLLPDGNI
                     LATPTGSCLGNLDPQRLSKVDPQGEWLSGDKPSKEVRFHLALYRNNPCCKAVVHLHST
                     WSTALSCLEGLDPQNVIRPFTPYVVMRMGDIPLVPYYRPGDDRIARDLAALAARHQAF
                     LLANHGPVVCGENLQEAANNTEELEETAKLIFILGERPIRYLTTEEIAQLRR"
     gene            complement(3370..>3692)
                     /locus_tag="MOX77_004451"
     CDS             complement(3370..>3692)
                     /locus_tag="MOX77_004451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="3-oxo-tetronate kinase"
                     /protein_id="HCA3359827.1"
                     /translation="TASTQALAAIQQQYGATEASYAVEALFSLLAARLAEGGITRFIV
                     AGGETSGVVTQSLGITGFHIGPCISPGVPWVNALHAPVSLALKSGNFGDESFFIRAQR
                     EFQV"
BASE COUNT          864 a         1106 c         1001 g          721 t
ORIGIN      
        1 agataatccc ggcgctttgc aagccctctt ccagacgctc tgcggtggta tgtttatcca
       61 tgcgcggcac cagcgtatac accgccagca gaacgctgat ggccaacgcg atcactggac
      121 ttcccacaaa gttgattgcc tgtaccaccg gatgcgtcgc caggccggac catccttcta
      181 cagtggcgag ggtggaacag atagccttca ggaagatcag cacgatcggc accacaatag
      241 gcagcagaga gagcgtcagg ctcggcagat ccttttgctc tttctcttta ttgtactgct
      301 ccagcgcggc attaacttca tcggcgttca gcgtgcgcgg cacgaaatca gggtagcgtt
      361 tatccagcca ctgcgcatag aacacaatgc cgatcacaca gggcaccgcc agcgccatcc
      421 cggtcaataa cattgcaccg atgtcgacgt taaaaatccc ggctaccccc agcggaccgg
      481 gcgtgggagg taccgtatgg tgagtgacca ccagcccgcc cgccagcgcg acgcccagcg
      541 tcagtagcga acgtttaccg cttttcgcca gcgctttcgc caccggataa agaatgacaa
      601 aagcggaatc gacgaaaatg gggatgctga caatataacc cgtgatcgcc agcgcccact
      661 cttcacggcg tttccccagc catttgataa agctccaggc gatacgctcc gccgcgccgg
      721 aaacctccag caagcgcccc atcattacgc cgagaccaat caccaggcca atgctgccca
      781 gcgtcgtacc gaatccgctg gtgatgacag agagcgtttt atcaatgccc attcccccca
      841 acagaccggc gatgcaggcc gccgccagca tcgcgatcag cgcatgaaca cgggtgcgta
      901 acaccagcca taccagcacg aaaacggcaa cgatcaggcc gataattggg gtcggtaaac
      961 ttgtcatgac ctcccctcca tatcatcttg tcgaaagcgt tcgataatgt catcgaagcg
     1021 tttatcggcg acaaaaccta acgccagcgc acgctggtta tcgatacgtc ccggccagga
     1081 ggcgacaatt ttctcgacgc cttcgtcgcg ctgatgcgta acccgatcgc gcgccgcctg
     1141 accgcccgcc tgacgcaacg tttccagcat ctcgcccacg gttacgctga tcccgggtaa
     1201 gttgatgctg ctcgcctcgc caggcgcggg taacgttgcg gccagcgaca ggttatggat
     1261 caccgtcgcc gggctggaaa tccacagccg caaactttcc gacaccggac agatggtcgt
     1321 ctcgccctgc aacggttcac gaataatcgc gctgacaaaa gaagaagcgg cgcggtttag
     1381 tttacccggg cgaacacaga tcgtcggcaa acgcagcgcc agcccatcca catagccttt
     1441 gcgggtatag tcgttgacca acagttcaca ggcggccttc tgcgcgccat aagacgagcg
     1501 cggcgtgagc gcggtggtat cggtgacgca ttccggcagc gtaccgccat aaacggcaag
     1561 cgagctggag aagacaaaac gaattttctg cggttgccga cgacacgcct caagtaactg
     1621 gcgggtaaga tccaggttaa ctttccatcc cagatcgaaa tcgtcttccg catgactgct
     1681 gacaatcgca gcgagatgat aaacaacaga ggtattagcg gtaatcacat tctccagtac
     1741 gcccggctgg gttaagtcag cttccaggca gcgtaaacga ggggaatctg ataaccgtgc
     1801 aggcattttt aaatcaacaa gaagcagttc gttaaacgcc agcgatgagt ttaataaggc
     1861 gcttgcgagt ttctggccta aaaagccgcc cccgccggta atgataatct gcatccggat
     1921 gtcctcttta ttgttgtgta gggtagttca gggttagcgc caggcgttaa accagccaag
     1981 cccctcctga gtggtattcc gtggttggta ttcgcagcct atccagccgc aataacctac
     2041 gtcatcgaac agccggaaca gccacgggta gttgatctcg ccatcatccg gttcatgtct
     2101 gtccggtagc gaggcgattt gtacatgggc atagcggccc gcgtactcgc gaatcaggtg
     2161 actcaaattg ccatccactt tttgcgcgtg gaaagtgtcg agctggatga atacatttgg
     2221 gcggtcaacc tcttctgcga tgcccagcgc ctgatattgg ctggaaaaga ggtagccggg
     2281 tttaacgccg ggactcagcg cttcgatcaa aatacgttta tcgtgggcgg caaaccggcc
     2341 ggcggcataa cgcaaattat cgataaacgt ggcgcgataa cgtgcgccat cagcgccatc
     2401 cggcacgacg cccgccatga tgtgaacctg ctcgcattcc agcgccagag cgtattccag
     2461 agccagatca atatcggcgc gcgcgtcgtg ttcgcgcccc ggtagcgcgg cacgtcccca
     2521 ctcgcccgcc gcggtatcac ccgccgaagt attaaacagc gccagcgtca gatcatgacg
     2581 cgatagctgg gctttaatct cgctggcggc aaagccgtag gggaacagaa actcaacggc
     2641 ctgaaaaccg gcttcggcag cagcggcaaa acgctcgata aacggcactt cggtaaacat
     2701 catcgacaaa tcggcggcaa aacgcggcat cgggttatct ccttaactgc gcaatttctt
     2761 cggtggttaa ataacgaatc gggcgttcgc caaggataaa aatcagcttt gccgtctctt
     2821 ccagctcctc ggtattatta gcggcttcct gcaaattctc cccgcacacg accggcccat
     2881 gattagccag taaaaaggcc tgatgccggg ccgccagcgc agccaaatcg cgagcaattc
     2941 ggtcatcccc cgggcgatag tagggaacca gcggaatgtc tcccatccgc atcaccacat
     3001 agggggtaaa cgggcgaatc acattttgcg ggtccagccc ttcgagacag gaaagcgccg
     3061 ttgaccaggt gctgtgcaga tgtaccacgg ccttgcagca agggttattg cgatacaacg
     3121 ccagatgaaa acgcacctct ttagacggtt tatcgccgct gagccattcg ccttgcgggt
     3181 ccactttgga tagccgctgc gggtcgagat tacccagaca cgaaccggtg ggcgtcgcca
     3241 gaatattgcc gtccggcagt aacagcgaga ggttgcctgc cgagccggtg gcatagccgc
     3301 gctggaaaaa cgaggcggct atcctgacca tctcttctcg caaagcgtgc tcttcttttg
     3361 ccagtatcgt catacctgaa actccctttg agcgcggatg aaaaaggatt catcgccaaa
     3421 attacctgac tttagcgcca gcgagactgg cgcatggagc gcgttgaccc acggcacgcc
     3481 gggtgaaatg cacggtccaa tgtggaaacc ggtaataccg aggctttgcg tcaccacgcc
     3541 cgaggtttcg ccgcccgcca caataaaccg ggtgataccg ccttccgcta agcgagcggc
     3601 cagcagggaa aagagcgcct ctaccgcata gctggcttcg gtagcgccat attgctgctg
     3661 gatggcagcc agcgcctgcg tggaggcggt gg
//
LOCUS       DAGWFR010000269         3688 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.272, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000269 DAGWFR010000000
VERSION     DAGWFR010000269.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 3688)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3688)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3688
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.272"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..315
                     /locus_tag="MOX77_004452"
     CDS             <1..315
                     /locus_tag="MOX77_004452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase"
                     /protein_id="HCA3359828.1"
                     /translation="TLYGFAMALGLLEQKIHARAPGELDDQPAEILHPDMVQPLRVKV
                     DRAACRLAGYRYGRQIADDYLTQLGQGEQQVARWLEAENDPRLTEIVIHLNHVVEEAR
                     IR"
     gene            312..722
                     /locus_tag="MOX77_004453"
     CDS             312..722
                     /locus_tag="MOX77_004453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase maturation HycH family
                     protein"
                     /protein_id="HCA3359829.1"
                     /translation="MSEQVVFSQLSRKFIDENDATPAEAQQVVYYSLAIGHHLGVIDC
                     LEAALTCPWDEYLAWIATLEAGSDARRKMEGVPKYGEIVIDFNHVQMLARAFDEARAA
                     QTPQQQEWSKLMLSMLHDIHQESAIYLMVRRLRD"
     gene            715..1185
                     /gene="hycI"
                     /locus_tag="MOX77_004454"
     CDS             715..1185
                     /gene="hycI"
                     /locus_tag="MOX77_004454"
                     /EC_number="3.4.23.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation peptidase HycI"
                     /protein_id="HCA3359830.1"
                     /translation="MTDVLLCVGNSMMGDDGAGPLLAEMCAAQPKGNWVVIDGGSAPE
                     NDIVAIRELRPQRLLIVDATDMGLNPGEIRIIDPDDIAEMFMMTTHNMPLNYLIDLLK
                     EDVGEVIFVGIQPDIVGFYYPMTQPIKDAVNIVYQRLEGWQGNGGFAALDAPEA"
     gene            1212..2021
                     /locus_tag="MOX77_004455"
     CDS             1212..2021
                     /locus_tag="MOX77_004455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3359831.1"
                     /translation="MLPGIGGKKNVKIIVWSGLLFLCLAARALATGVVGYLPMSDGEY
                     AQKRALKPLLILPYSVSPDQTWHFRQVGVSSVTLLPEPKKDNEWRISGKDRAGNSWVV
                     PVGRLINLAGNAQFYRADLDRNGIQDLVIWLGNPGLGLAPSAQYIIFTFLKNGRPCVF
                     EPWGFYTATDTGVDDLLDLQGNGRTQLLDMQFDSGYWITNLYQVKDARWQRVHGWFGR
                     LSYPALTRFNHYPGRKLIIKPIAGRNPQTDDLSLTQRCLIRGNVLPGVNQD"
     gene            2222..2767
                     /gene="hydN"
                     /locus_tag="MOX77_004456"
     CDS             2222..2767
                     /gene="hydN"
                     /locus_tag="MOX77_004456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport protein HydN"
                     /protein_id="HCA3359832.1"
                     /translation="MNRFIIADASKCIGCRTCEVACVVSHQENQDCASLTPETFLPRI
                     HVIKGVNVSTATLCRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYG
                     AMEVVVRPVVRNSGAGLNVRAEKAEANKCDLCHHREAGPACMAACPTHALICVDRNKL
                     EQLSAEKRRRAALDSTASLLF"
     gene            2913..>3688
                     /locus_tag="MOX77_004457"
     CDS             2913..>3688
                     /locus_tag="MOX77_004457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyltransferase HypF"
                     /protein_id="HCA3359833.1"
                     /translation="MAIDTPSGVQLRIRGKVQGVGFRPFVWQLAQQLQLHGDVCNDGD
                     GVVVRLLEDPSQFIAALYQDCPPLARIDSVEHASLVWERAPTDFTIRQSAGGSMNTQI
                     VPDAATCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCP
                     ECDSEYRDPYDRRFHAQPVACPSCGPHLEWRSQHERAEKEAALQAAVAQLNAGGIIAV
                     KGLGGFHLACDARNDNAVAMLRARKHRPAKPLAVMLPTAQT"
BASE COUNT          796 a          952 c         1100 g          840 t
ORIGIN      
        1 acgctgtatg gctttgcaat ggcgcttggc ctgctggagc agaaaatcca cgcccgcgcg
       61 ccgggtgagc tggacgatca gcccgcagag atcctgcatc cggatatggt gcagccgctg
      121 cgcgtgaagg tggatcgcgc ggcgtgccgg ctggcgggtt atcgctatgg tcgtcagatc
      181 gccgatgatt acctgacaca gttggggcag ggcgagcagc aagtggcgcg ttggctggaa
      241 gcggaaaacg atccgcgttt aaccgaaatt gtcatccatc tcaatcatgt tgttgaagag
      301 gcgcgtatcc gatgagcgaa caggtggtgt tcagtcaact gagccgtaag tttattgatg
      361 agaacgatgc gacgcccgcc gaggcgcagc aggttgtcta ttacagcctg gcgattggtc
      421 accacctggg ggttatcgat tgcctggagg ccgcgctcac ctgcccatgg gatgagtatc
      481 tggcgtggat cgccaccctg gaagccggta gcgatgcccg gcgtaaaatg gaaggcgtgc
      541 cgaagtatgg cgagatcgtc atcgatttca accatgtgca aatgctggcg cgcgcgtttg
      601 atgaggcgcg cgccgcgcag accccgcagc agcaagaatg gagcaaactg atgctcagta
      661 tgctgcatga cattcatcag gaaagcgcca tctacctgat ggtgaggagg cttcgtgact
      721 gacgttttac tctgtgtcgg caacagcatg atgggcgacg acggcgcagg cccattactg
      781 gcggaaatgt gcgcggcgca gccgaagggc aactgggttg tcatcgatgg cggcagcgcg
      841 ccggaaaacg acattgtggc gattcgcgaa ctgcgcccgc agcgtctgtt gattgtcgac
      901 gccaccgata tgggacttaa tccgggcgag atccgcatca tcgatccgga tgatatcgcc
      961 gaaatgttta tgatgaccac ccacaatatg ccgctgaact accttatcga tctgctgaaa
     1021 gaggatgtcg gcgaggtgat ttttgttggt atccagccgg atatcgtcgg gttttattat
     1081 ccgatgactc aaccgattaa ggacgcggta aacatcgtct atcagcgcct ggaaggctgg
     1141 cagggaaacg gcggatttgc cgcgctggac gcgccggagg cgtaaaatgc gtactcattc
     1201 tggatggatt tgtgttaccc ggcataggcg gtaagaagaa cgtgaagatt atcgtatgga
     1261 gcggactgct atttctctgc ctcgccgcac gcgcactggc taccggtgtt gtcggttacc
     1321 tgccgatgag cgacggtgaa tatgcgcaaa agcgtgcgct gaagccgctt ttgatcctgc
     1381 cttattctgt atcgcccgac cagacctggc attttcgcca ggtcggagtc agtagcgtga
     1441 cgctactgcc ggagccgaaa aaagataacg aatggcggat tagcggaaaa gacagagccg
     1501 gtaattcgtg ggttgtcccg gtgggaaggc tgattaattt ggcgggtaat gcgcaatttt
     1561 atcgcgctga cctcgatcgt aacggcattc aggacttggt tatctggttg ggcaatcctg
     1621 ggttgggcct ggcgccgagc gcgcaataca tcattttcac ctttctcaag aatggccgcc
     1681 cctgcgtctt tgaaccgtgg gggttttata ccgccaccga tactggcgtc gatgatttgc
     1741 ttgatttaca gggcaatggt cgcacgcaac tgttggatat gcagtttgac tcaggctact
     1801 ggataaccaa tttatatcag gtgaaggacg cccgctggca gcgcgtacac ggctggtttg
     1861 gccggttgag ttatccggcg ctgacccgct ttaatcacta tcctggccgt aaattaatta
     1921 tcaaacctat tgccggaagg aatccgcaaa cggacgatct ttcccttacg cagcgctgtt
     1981 taatacgcgg taacgtattg ccaggcgtta atcaggattg atgccagttt ctgtgcagag
     2041 ttggctggct atcactgcaa atcttgacca ccactggcga cattacgtgt catcgacact
     2101 tgtgacgatg acacgtaaat gctcacgaaa atagaaagaa tattcttaaa taacaatgaa
     2161 ataaaaattg gcacgattcg tgtatatatc ggcacatcat ctgttattgc tggagaattt
     2221 gatgaaccgt ttcatcattg cagacgcgag taagtgcatt ggttgccgta cctgtgaagt
     2281 ggcttgcgtc gtatcccatc aggaaaatca ggattgcgca tcgctgaccc ctgaaacctt
     2341 tttacctcgt atccatgtta tcaaaggcgt gaacgtttcc acggcaacgc tgtgtcgcca
     2401 gtgtgaagat gcgccgtgcg ccaacgtttg cccgaatggt gccatcagcc gtgacaaagg
     2461 ctttgttcat gtgatgcagg aacgctgcat tggctgtaaa acttgcgtag tggcatgtcc
     2521 ttacggcgcc atggaagtgg tggttcgtcc ggtggttcgc aatagcggcg cggggctaaa
     2581 cgtgcgtgcc gaaaaagccg aagccaacaa gtgcgatctg tgtcaccacc gtgaagccgg
     2641 tccggcctgt atggccgctt gcccaacgca cgccctcatc tgcgtggacc gcaataagct
     2701 tgaacagctg agcgcggaaa aacgccgtcg tgcggcgctg gattcaacgg catcgctgct
     2761 tttctgattt ctgcgattgc gcgtagaata cgccacaaag cattgccgga tggcggcatc
     2821 aatgccttat ccggtctacg gtccgtgcgg ttgtaggcct gataagcgtc gcgccatcag
     2881 gcatccgggt tcgatgatgg cgggaaaata agatggcgat agacacacct tccggcgtac
     2941 agctacgcat tcggggcaaa gtacagggcg tcggttttcg tccttttgtc tggcagctgg
     3001 cgcagcagtt gcaattacac ggcgacgtgt gtaatgacgg cgacggcgtc gtcgttcggc
     3061 tgctggaaga tccgtcgcaa tttattgccg cgctctatca ggattgcccg ccgctggcgc
     3121 gcattgacag cgttgaacac gcgtcgttgg tatgggagcg cgcaccgacg gatttcacca
     3181 ttcgtcagag cgcaggcggt tcgatgaaca cgcaaatcgt gccggatgcg gcgacctgcc
     3241 cggcatgtct tgccgagatg aataccccag gcgagcggcg ctaccgttat cctttcatca
     3301 attgcaccca ctgcggacca cgcttcacca ttattcgcgc tatgccctat gaccggccat
     3361 ttacggtgat ggcggcgttt cccttgtgtc cggaatgcga cagcgaatac cgcgatccgt
     3421 acgatcgccg ttttcatgcc cagcccgttg cctgtccgtc atgcgggccg catcttgagt
     3481 ggcggagcca acatgaacga gcggaaaaag aggcggcttt gcaggcggcg gtcgcccaac
     3541 tgaacgccgg aggcattatt gccgttaaag ggctgggtgg ttttcatctg gcctgcgacg
     3601 cgcgcaacga taacgcagtg gcgatgctgc gggcgcgtaa acatcgtccg gcgaaaccat
     3661 tggcggtgat gttgcccacg gcgcaaac
//
LOCUS       DAGWFR010000270         3678 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.273, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000270 DAGWFR010000000
VERSION     DAGWFR010000270.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 3678)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3678)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3678
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.273"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..1883
                     /locus_tag="MOX77_004458"
     CDS             <1..1883
                     /locus_tag="MOX77_004458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="type VI secretion system tip protein VgrG"
                     /protein_id="HCA3359834.1"
                     /translation="GSAVPPGALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPA
                     ANLPLKPMVGKDLCVNIELDGGGKRHISGLVTAARVVGHEGRSVTYELRMEPWVKLLT
                     HTSDYKAFQNKTVVDILDEVLAEYPYPVEKRLVESYPVRTWQVQYGETDFDFLQRLMQ
                     EWGIYWWFEHSEDSHTLVLADAISAHKACPDSPLVEWHQEGLKLDKEFIHTITANESL
                     RTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEWPGDYFDKSEGEMLTRIRME
                     AQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQEYLLMQTLLFVQDNAQHSGQDQ
                     HFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVKVQFGW
                     DRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQ
                     DTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNN
                     ETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTYRLDVGDQFT
                     LRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPDGGTAVTADDIAPLPT
                     SE"
     gene            1907..2353
                     /locus_tag="MOX77_004459"
     CDS             1907..2353
                     /locus_tag="MOX77_004459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DcrB-related protein"
                     /protein_id="HCA3359835.1"
                     /translation="MDRPYRIQEGCFVLPETFTDRSVNIFILEGNERTSPSLNISRDT
                     LKPDEDLPAYIDRQIALMKKNLGQHRVLSRAPAQAGTGNDALMGEQIAATHKSGKTEV
                     YQRQAGFIATPGKVLVFTLTSPRPFDDKADLLWNTWLAGFQPDKNE"
     gene            2372..>3678
                     /locus_tag="MOX77_004460"
     CDS             2372..>3678
                     /locus_tag="MOX77_004460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAAR domain-containing protein"
                     /protein_id="HCA3359836.1"
                     /translation="MYEAARVDDPIYHTSALAGFLIGAIIGIAIIALAAFAFFSCGFL
                     AGLILGFMADQIASGVLQLGEAIGRSIHHTAGKILTGSENVSTNSRPAARAVLSTVKC
                     DNHIAEKRIAQGSGNIYINSQPAARKDDHTECDAVVEDGSPNVFLGGGTQTVLEISSE
                     IPDWLRKVVDVLFVVASLLGGLAGAWRQAAKLGTKFGTKCAAKFIGGELTGMAVSEAI
                     SGLFSNPVDVTTGQKILLPETDFTLPGRLPVTCSRFYASHLETVGLLGQGWRLNWETS
                     LREDDEHITLTGVQGRELRYPKMMLTPGHQIFGPKEQLYLSRLHDGRYVLHYTDRSYY
                     VFGDFDSDGMAYLLFMETPHRQRIVFGHEGGRLVRIASSSGHHLLLHRTQTPAGERLS
                     RIELVQGGTCGNLVEYRYDDNGQLTGVVNRAGTQVRQFAYENGL"
BASE COUNT          869 a          981 c         1094 g          734 t
ORIGIN      
        1 gcggcagcgc cgtaccgccg ggcgcattac tgttcgccag cctggacggc ggcgaaacat
       61 taagtgaact gttcagttat gtggtacagc taaaaacgcc cgacaccctg aatctgggct
      121 atgtctcccc ggcggccaac ctgccgctca aaccgatggt gggcaaagat ctgtgcgtca
      181 acatcgaact ggatggtggc ggtaaacgac atatcagcgg gctggtcacg gcggcgcggg
      241 tggtgggcca tgaagggcgt tcggttacct atgagctgcg tatggagccg tgggtaaaac
      301 tgctgaccca taccagcgac tacaaagcat tccagaataa aaccgtggtg gatattctgg
      361 atgaggttct ggcggaatac ccctacccgg tggaaaagcg gctggtggaa agctacccgg
      421 tacgcacctg gcaggtgcag tacggtgaaa ctgattttga ttttcttcag cgactgatgc
      481 aggagtgggg catctactgg tggtttgagc acagcgagga cagccacacg ctggtgctgg
      541 cggatgccat cagcgcccac aaagcatgtc cggactcgcc gctggtcgag tggcaccagg
      601 aagggctgaa gctggacaag gagtttatcc acactatcac ggcaaacgag agtctgcgga
      661 ctggccagtg ggtgctggat gatttcgatt ttacgaagcc acgttcattg ctggcaaaca
      721 ccgtggcaaa cccgcgtgaa accggtcatg ccacctacga gcattatgag tggccgggag
      781 actacttcga caagagtgaa ggcgagatgc tgacgcgcat tcgtatggaa gcgcagcgca
      841 gccccggcag tcgggtgctg gggggaggga atatccgcac actcatgacc ggttatacct
      901 tcacgctgga aaactatccc accgccgaag tcaatcagga atacctgctg atgcagacct
      961 tgctgtttgt acaggacaac gcgcagcaca gcgggcagga ccagcacttt accttttcca
     1021 cccgttttga actgcacccg acccgtgagg tgttccgccc gcagcggacg gtgagcaaac
     1081 cccacaccaa agggccgcag agcgccatcg tcaccggccc ggcgggccag gaaatctgga
     1141 cggatcagta cgggcgggta aaggtacagt ttggctggga tcgctacggc aaaatggatg
     1201 aaaacagctc ctgctggata cgcgtcagct acccatgggc gggcaaaggc ttcgggatga
     1261 tccagatccc gcgtatcggc caggaagtgc tggtggattt caaaaacggc gatccggatc
     1321 tgccgatcat cgtggggcgt acctacaacc aggacaccat gccgccgtgg ggactgccgg
     1381 gaatggcgtc gcagagcggg atcttcagcc actcgctgta tggcgggcca acgaacggca
     1441 acatgctgcg ttttgacgac aaaacgggcg cggaggaagt gaagttccac gcggaaaaag
     1501 atctcaacac cacggtgaag aataatgaaa cgcatacggt tatggtggat cgcactaaaa
     1561 ccattattaa aaatgaaacc aacagtattg gtgaagacag aaacaccacg gtaacgaaga
     1621 atgacggcct ttccgtaaaa ctggcgcaga cgatcaatat cggcaccact tatcgtttag
     1681 atgttggcga tcaattcaca cttcgctgcg gcaatgcggc gcttgtttta cataaggacg
     1741 gctccattga gttttgtggc aagcaactga tgttgcatac cagcgatgtc atgcaactga
     1801 ttggtaaagg tattgatatg aacccggatg gcggcacagc cgtaaccgcc gatgatattg
     1861 ccccccttcc cacctctgag tgatctgaat taaacctgga gttctcatgg atcgaccata
     1921 ccgcatacag gaagggtgtt ttgtcctgcc tgaaacattt acggatcgca gcgtcaatat
     1981 ttttatcctg gagggcaatg aacgaacatc gcccagcctg aatatttccc gcgatacgct
     2041 aaaacctgat gaagacctgc ccgcctatat tgaccgccag attgcgctga tgaaaaaaaa
     2101 tctcggtcag caccgggtat tgtcgcgagc gcctgcacag gcaggaacgg gcaatgatgc
     2161 cctgatgggg gaacaaattg ccgccaccca taaatccggg aaaacggaag tgtaccagcg
     2221 tcaggccggg tttattgcaa cccctggcaa ggtactagtc ttcaccctga ccagtccccg
     2281 tccttttgat gataaagcag acctactctg gaacacctgg ctggcaggct ttcagccgga
     2341 taaaaacgaa taatcacacg gaggtgtgac catgtatgaa gcagcccgtg tggatgaccc
     2401 tatctaccac accagtgcgc tcgccgggtt tcttatcggc gctatcatcg gcatcgccat
     2461 tatcgcgctt gccgcctttg ccttctttag ctgcggtttt cttgccgggc tgattctggg
     2521 ttttatggcc gatcaaatag cctccggggt attgcaactg ggcgaggcca tcgggcgctc
     2581 catccaccac acggcaggaa aaatcctcac cggttcggag aatgtcagca ccaacagtcg
     2641 cccggcggcg cgcgcggtac tgagtacggt gaaatgcgat aaccatatcg cagaaaaacg
     2701 catcgcccag ggttccggca atatttacat caacagccag cctgccgccc gtaaggatga
     2761 ccataccgaa tgcgatgcgg tggttgaaga cggttcgccg aatgtgtttc tcggcggcgg
     2821 cacacagacg gtactggaaa tcagttctga aattccggac tggctgcgca aggtggtgga
     2881 tgtattgttt gtcgtggcga gtctgctcgg cgggctggcc ggggcgtggc ggcaggcggc
     2941 aaagctgggg acgaaatttg gcactaaatg tgccgctaag tttatcggcg gggagcttac
     3001 cgggatggcc gtgagtgagg ctatcagcgg gctgttcagc aatccggtgg atgtgaccac
     3061 cgggcagaaa atcctgctgc cggaaacgga cttcaccctg cccggtcgcc tgccggtcac
     3121 ctgctcgcgt ttttacgcca gccacctgga aaccgtggga ctgttgggac agggctggcg
     3181 gctgaactgg gaaaccagcc tgcgcgagga cgatgaacac atcacgctga ccggcgtaca
     3241 ggggcgggaa ctgcgttacc cgaaaatgat gctgacgccc ggccaccaga tatttggccc
     3301 gaaagaacag ttatacctca gccgcctgca tgacgggcgt tacgtgctgc attacaccga
     3361 tcgcagctat tacgtatttg gtgattttga cagtgacggc atggcatacc tgctgtttat
     3421 ggagacgccg caccgccagc gcattgtctt cgggcacgaa ggaggcagac tggtacggat
     3481 agcctccagc agcgggcatc acctgttact gcaccgcaca cagaccccgg caggggagcg
     3541 gctgtcgcga attgaactgg tgcagggcgg cacctgtggc aatctggtgg agtaccggta
     3601 tgacgataac ggtcaactga ccggcgtggt gaaccgggcg ggaacgcagg tgcggcagtt
     3661 tgcttatgaa aacgggct
//
LOCUS       DAGWFR010000271         3664 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.274, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000271 DAGWFR010000000
VERSION     DAGWFR010000271.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 3664)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3664)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3664
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.274"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..148)
                     /locus_tag="MOX77_004461"
     CDS             complement(<1..148)
                     /locus_tag="MOX77_004461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3359837.1"
                     /translation="MSFVSTNNKSGMGGLTTTTPPITGESGGVTADSVAGSVADAAEA
                     AVEQA"
     gene            complement(626..1063)
                     /locus_tag="MOX77_004462"
     CDS             complement(626..1063)
                     /locus_tag="MOX77_004462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000290976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2778 domain-containing protein"
                     /protein_id="HCA3359838.1"
                     /translation="MAVRLTFDGQKLTWPGIGIFKATTGLPDLQWPDKQCVPDAAIPE
                     GNYKLFIQFQGEAPIRNAADCDLGPSWGWSTIPRGQAAGTCEIYWANWGYNRIRLESA
                     DEKTRKACGGKRGGFYIHDSTKGYSHGCIEVEPVFFRILKQET"
     gene            complement(1090..1506)
                     /locus_tag="MOX77_004463"
     CDS             complement(1090..1506)
                     /locus_tag="MOX77_004463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2195 family protein"
                     /protein_id="HCA3359839.1"
                     /translation="MKKYAVEVLFMSACAGMFLPVFAWGGTDVNIDNPLAECVDIHPV
                     HRQEMDNLTILKTTVTLKKSTGECGCFSALISYTSLLAQDVEGYGRGSAYSLQEGNIS
                     LAKMQGRYPFSFVLSVDNQSVRDQKLALMIRCTPPL"
     gene            complement(1634..2095)
                     /locus_tag="MOX77_004464"
     CDS             complement(1634..2095)
                     /locus_tag="MOX77_004464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001670388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3359840.1"
                     /translation="MPRKIMLVFFLFISEFCYAQAVVSEFNLSDINRGGMTKAQAEKL
                     LIIALKYQKYDLSLDGVFVDGDLQDKHGNPPHPGYYDFSLGYDTPTAGAIDYWGLFSV
                     SSQTGDIWEINKCERIIFPQLQKIQQEIMKKTGATFASEVVQRRGLGCTDE"
     gene            complement(2080..2550)
                     /locus_tag="MOX77_004465"
     CDS             complement(2080..2550)
                     /locus_tag="MOX77_004465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000528842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosaminidase domain-containing protein"
                     /protein_id="HCA3359841.1"
                     /translation="MGNYDKACNNVGAVRFVQEHMKVCEIIAKELDVPVENILGLAAA
                     ESQYGTGRIARGYNNYFSLQAPASFQSGRVHPKDSNKTWVAIFSSFSVCARSFAVKYG
                     DAVRGKKDALVFSEALVAAGFNSGSHITGGTDNYARITAGIIIMVGRRIACPVK"
     gene            complement(2654..3127)
                     /locus_tag="MOX77_004466"
     CDS             complement(2654..3127)
                     /locus_tag="MOX77_004466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016506348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3359842.1"
                     /translation="MFSKIVSLLLFTILSVSSYAQVLVSNIPVFDLAKLNQEGLAETQ
                     AQALLVLSLKNKKYNITLPSVFMDEALKNDQGKPFHSGYYSFGVGYDSPSVGATDIWG
                     LFSVSPKTGDIWEEYSCERISFPALQKIQQEIMKKTGATFASEVVQRRGLGCTDE"
     gene            complement(3112..3582)
                     /locus_tag="MOX77_004467"
     CDS             complement(3112..3582)
                     /locus_tag="MOX77_004467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000501515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosaminidase domain-containing protein"
                     /protein_id="HCA3359843.1"
                     /translation="MGNYDKACNNTEAVRFIQKYKNDCEIIANQLEVPVEFILAVAAK
                     ESRYGQGRIATEYNNFFSMHGPAPLQLSKVHPQGSHDVWVATYTSFLNCAKSFAIRFG
                     SAVRKINDPKKFAQALIESRFNSGKSSNGGHTGYASELVAMIGMVKRRMACSVK"
BASE COUNT         1022 a          962 c          616 g         1064 t
ORIGIN      
        1 cagcctgttc cacggcggct tctgccgcat ctgccacgct tccggcgact gaatctgcgg
       61 tgacaccgcc actttctccg gttatcggcg gcgtggttgt cgtcagccct cccataccgg
      121 atttattatt tgtggataca aaactcatgg tagtgactcc tttaataccg gattaaaata
      181 aatagactca ccgtcaggaa acagtgcccc gcactttata atgcaaccag cctgttatat
      241 ttaaatattt accagaagaa cagggtatat tgctgacaag agccatgaaa ataaaaacac
      301 aaaaattagc acataacata aatactgaat tacataaata aggaaatgaa tataacaata
      361 ttatgatttt atttttatta cgcttaccag attcgcattg cattttataa aaatttgatt
      421 aataaccagc acaccgccag tcatatactt tatcattggt gctcgttact tatctggcca
      481 ccattgtaat cattgtcaac cacagcacgt tcagacacga taatttgatc cggttttaac
      541 ggtattattg ttttgttcca ccattcgttt gctgaccaga aacatactta acattaaccg
      601 taaatatctt ttcaccattt tctttttacg tctcctgttt cagaatacgg aaaaacaccg
      661 gttccacttc aatacaacca tggctgtaac ctttggtgga atcatggata taaaaaccac
      721 cccgcttgcc cccacaggct tttcgggtct tctcatccgc tgattccagc cggatacggt
      781 tatatcccca gttcgcccag tatatctcac atgttccggc agcctggcct cgcggaatgg
      841 tactccagcc ccatgatggt cccagatcac aatccgcagc atttcttatc ggtgcctccc
      901 cctgaaactg aataaacaat ttataattcc cttccggtat cgccgcatcc ggcacacact
      961 gtttatctgg ccactgtaaa tccggtaacc ccgtggtcgc cttaaatatc ccgataccag
     1021 gccatgtcag cttttgcccg tcaaaagtca gtcttactgc catcatcttc tccctgacta
     1081 ttctgtgtat tacagcggtg gtgtacaacg tatcattagc gccagcttct gatcccgtac
     1141 agactggtta tccaccgata atacaaagct gaaaggataa cgtccctgca tcttcgccag
     1201 tgagatattc ccctcctgaa gggaatatgc acttccgcgt ccgtaaccct caacatcctg
     1261 cgccagtaag ctggtatagc tgattaatgc tgagaaacag ccacattcac cggtactttt
     1321 tttcagtgtg accgttgttt tcagaatggt aaggttatcc atttcctgac gatgaacggg
     1381 atggatatcc acacactccg ccagcgggtt atcaatgttt acatctgttc cgccccaggc
     1441 aaatacgggc aggaacattc ctgcacaggc agacataaac agaacctcta cagcgtactt
     1501 tttcacagca tctgacctct atttttttca tccaccagcc gcagtgcatc catataccgc
     1561 ccttcactgt tctgctgcca gaaccagcct tgccctggca ggtaacgtat gcccggtaga
     1621 tccaactatc ccactattca tctgtacagc ccagcccccg gcgctgtacc acttcactgg
     1681 caaatgtcgc gccagttttt ttcattattt cttgttgtat tttttgcaac tgcggaaata
     1741 taattctctc acatttattt atttcccata tatcaccagt ttgagaactt actgaaaaca
     1801 gcccccaata atctattgct ccggcagtcg gtgtatcata gccaaggcta aaatcataat
     1861 atcccggatg gggaggattt ccgtgtttat cctgcaaatc accgtcaaca aaaacgccat
     1921 ccagcgataa atcatatttt tgatatttaa gtgcaataat gagtagtttt tctgcctgtg
     1981 ctttcgtcat tccaccgcga tttatatctg acaaattaaa ttcagataca accgcttggg
     2041 cataacagaa ctcagatata aagagaaaaa aaacaagcat tattttacgg ggcatgctat
     2101 tctccgcccg accataataa ttattccagc agttatcctg gcgtaattat ccgtaccacc
     2161 agtaatatga gatcctgaat taaacccagc agctaccaga gcttcagaga agaccagagc
     2221 atcttttttc ccccgaacag cgtcaccata cttgacagca aaagatcgcg cacaaactga
     2281 aaacgaagaa aaaatagcca cccaagtttt gttactatcc tttggatgaa cccgacctga
     2341 ctgaaatgat gcaggagcct ggagagaaaa gtaattatta tatcccctgg caatacgacc
     2401 tgtaccatat tgactttcgg cagcagcaag acccagtata ttctctaccg gtacgtcaag
     2461 ctcttttgca attatctcac aaaccttcat gtgctcctgg acaaatctta ccgcacccac
     2521 gttattacac gctttatcat aattacccat ttcttcattc cttagcagat gtttttaaaa
     2581 cctccatgct cattatttct ccgccagcct tgcccttgca ggtaacgtat gcccggtaga
     2641 tccaactacc ccgctattca tctgtacagc ccagccctcg ccgttgcacc acttcactgg
     2701 caaatgtcgc gccagttttt ttcattattt cttgttgtat tttttgtagc gccggaaatg
     2761 atattctctc acatgaatat tcttcccaga tatcacctgt tttcggactg acggaaaata
     2821 atccccagat atccgtagca ccaacagaag gagagtcata gcccacacca aagctataat
     2881 atccagaatg aaatggctta ccctgatcat tttttaaggc ctcgtccata aaaacgctag
     2941 gcaatgtaat attatatttt ttatttttta atgataaaac caataatgcc tgagcctgtg
     3001 tctcggcaag cccttcctga tttaatttag ccaaatcaaa caccgggata tttgatacaa
     3061 gaacctgggc ataactgctc acggataaaa tagtaaacaa aagcaatgac actattttac
     3121 tgaacatgcc attctccgct taaccatacc aatcatagcc accagttcac tggcgtatcc
     3181 ggtatgtcct ccattactac ttttacctga attaaatcgt gactcaatca atgcttgtgc
     3241 aaatttttta ggatcgttta tctttctgac tgcactacca aacctgatgg cgaatgattt
     3301 cgcgcaattt aaaaaagacg tataggtggc aacccacacg tcgtgacttc cctgaggatg
     3361 aactttactc aactgcaatg gtgccggacc atgcattgaa aaaaaattat tatattcagt
     3421 tgcaatcctt ccctgcccat aacgactttc ctttgctgca accgccagta taaactccac
     3481 tggcacttca agttgattag cgattatctc acaatcattc ttatattttt gaataaacct
     3541 taccgcctct gtgttattac acgctttatc ataattaccc atttcttcat tccttagcag
     3601 atgtttttaa aaccaccatg ttcattattt ctccgccagt cgcagcgcat ccacataccg
     3661 ccct
//
LOCUS       DAGWFR010000272         3650 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.275, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000272 DAGWFR010000000
VERSION     DAGWFR010000272.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 3650)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3650)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3650
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.275"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..402)
                     /gene="pxpB"
                     /locus_tag="MOX77_004468"
     CDS             complement(<1..402)
                     /gene="pxpB"
                     /locus_tag="MOX77_004468"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpB"
                     /protein_id="HCA3359844.1"
                     /translation="MQRARCYLLGETAVVLELEPPITLASQKRIWRLTQRLVDMPNVV
                     EAIPGMNNITVILREPQTLALDAIERLQRWWEESEALEPDSRSVEIPVIYGGAGGPDL
                     AAVARHSGLSEKQVVELHASVEYVVWFLGFQP"
     gene            complement(418..1161)
                     /gene="ybgI"
                     /locus_tag="MOX77_004469"
     CDS             complement(418..1161)
                     /gene="ybgI"
                     /locus_tag="MOX77_004469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000798886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radiation resistance protein YbgI"
                     /protein_id="HCA3359845.1"
                     /translation="MKNTELEQLINDKLNSAAISDYAPNGLQVEGKETVQKIVTGVTA
                     SQALLDEAVRLQADAVIVHHGYFWKGESPVIRGMKRRRLKTLLANDINLYGWHLPLDA
                     HPELGNNAQLAALLGITVKGEIEPLVPWGELSMPVPGLELASWIEARLGRKPLWCGDT
                     GPENVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHAT
                     ERGGIRALSEWLNENTALDVTFIDIPNPA"
     gene            1490..2971
                     /locus_tag="MOX77_004470"
     CDS             1490..2971
                     /locus_tag="MOX77_004470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3359846.1"
                     /translation="MNKQASQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDD
                     NHAYELFSAYCSLVYVTPILGGYLADKVLGNRMAVMLGAFLMAIGHLVLGASEIAPTF
                     LYLSLAIIVCGYGLFKSNISCLLGELYQPEDPRRDGGFSLLYAAGNIGSIVAPIACGY
                     VQEEYSWAMGFALAAIGMLAGLVIFLCGNRHFTHTTGVNKAVLCARNYLLPNWGWLLI
                     LLVAAPLLITVLFWKEWSVYALIVATAIGLVVLAKIYRQAQTAKQRKELGLIVTLTLF
                     SMLFWAFAQQGGSSISLYIDRFVNRDILGYSVPTAMFQSVNAFAVMLCGVVLAWLVKE
                     SVSGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAAYGHSSMPLMVLGLAVMGFAEL
                     FIDPVAMSQITRIDIPGVTGVLTGIYMLLSGAIANYLAGVIADQTSQSAFDASGAVNY
                     AINAYVDVFEQITWGALACVGVVLLIWLYQSFKFKSRALAVES"
     gene            complement(3010..>3650)
                     /locus_tag="MOX77_004471"
     CDS             complement(3010..>3650)
                     /locus_tag="MOX77_004471"
                     /EC_number="4.1.99.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459694.1"
                     /note="UV-induced DNA repair; converts cyclobutane-type
                     pyrimidine dimers created during exposure to UV ratiation
                     to monomers; light dependent; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="deoxyribodipyrimidine photo-lyase"
                     /protein_id="HCA3359847.1"
                     /translation="PQALDGGPGSVWLNELIWREFYRHLMTWYPALCKHQPFIRWTKR
                     VAWQENPHYFQAWQKGETGYPIVDAAMRQLNATGWMHNRLRMITASFLVKDLLIDWRL
                     GERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQRERFDRDGEFIRQWL
                     PALRDIPGKAIHEPWRWAEKAGVVLDYPRPIVEHKQARIATLSAYEAARKGA"
BASE COUNT          769 a         1059 c          937 g          885 t
ORIGIN      
        1 gggctgaaag cctaaaaacc agacgacata ctcaacggag gcatgtagct ccacgacctg
       61 cttttcactc aaaccgctgt gccgtgccac cgccgccaga tccggcccgc ctgcgccgcc
      121 atagatcacc gggatctcaa ccgaacgcga gtccggttcc agcgcctcgc tctcttccca
      181 ccagcgctgc agacgctcaa tcgcatccag cgccagagtt tgcggttccc gcaagatcac
      241 ggtgatattg ttcatcccgg gaatggcttc caccacgttc ggcatatcga ccagacgctg
      301 cgtcagacgc cagatgcgtt tctggctcgc cagcgtaatc ggcggttcaa gttccaggac
      361 gaccgccgtt tcgcctaaca gataacaacg cgctcgctgc actttattac ctctcagtta
      421 tgccgggtta gggatatcaa taaacgtcac atccaacgcc gtgttttcgt tcaaccattc
      481 gctcagggcg cgaataccgc cgcgttcagt ggcatggtgc ccggcggcat aaaaatgcag
      541 cccctgttcg cgtgcggaat gaatggtctg ttcagacacc tcgccggtaa taaaagcatc
      601 cacgccgaag cgggcggcgc tatcaataaa actttgtccg ccgccggtac accaggcgac
      661 acgctgcaca ttctctggcc cggtatcgcc gcaccatagc ggtttacgcc ccagacgcgc
      721 ttcaatccat gaggccagtt ccagccccgg caccggcatt gagagctctc cccacggcac
      781 cagcggctca atttctcctt tcacggtaat gcccaatagc gccgccaact gcgcattgtt
      841 gcccagctca gggtgcgcat ccagcggcag atgccaaccg taaaggttaa tatcatttgc
      901 cagtaacgtt tttaagcgac ggcgtttcat gccgcgaata accggagact cgcctttcca
      961 gaagtaacca tgatgaacaa tgaccgcatc ggcctgcaaa cgcaccgcct catcgagcag
     1021 cgcctgactt gcggtcacgc cggtaacgat tttctgtacc gtctcttttc cttcgacctg
     1081 taaaccattc ggcgcataat cgcttattgc cgcactgttc agcttgtcgt taatcagttg
     1141 ttccagctcg gtgtttttca tcatcgctcc ctttaaccca cgttctactt tcccgttacg
     1201 ggttcagtct ccgttaacat agcctcccgt tagccgttcg tcgataaaca tttgtttgac
     1261 acatcaagaa acaatcaccc ccgggtttgg cgcaaattac ttagcaaaac acgatcggtt
     1321 tcatgtatat ttatgcaatc agaacgcata ttgcagaaaa aatcagttct gtatcatgtt
     1381 ggtaacttta aggaaacacg gcgatacggc aggcttaata agcccacaaa gaaaggcatt
     1441 atctgagaat gccgcgttct tgccgcagcg tctctatccc ggaaatacga tgaataaaca
     1501 agcatctcaa ccccgcgcta tttactacgt tgtcgccctg caaatttggg agtacttcag
     1561 cttttatggt atgcgcgccc tactgattct ttatctcacc aatcagctaa aatacgacga
     1621 taaccacgcc tatgagttat tcagcgctta ttgttcgctg gtctacgtaa cgccaattct
     1681 cggcggctat ctggcggata aggtgcttgg caaccgaatg gcagtcatgc tgggcgcatt
     1741 tttaatggct ataggtcatt tagtgctggg cgccagtgag atcgcgccga cattccttta
     1801 tctgtcgctg gcgatcattg tctgcggcta cggcctgttt aaatcgaata ttagctgcct
     1861 gctgggcgaa ctgtaccagc cggaagatcc gcgccgcgac ggcgggttct cgctgcttta
     1921 cgcagcgggc aatattggtt cgatcgtggc gcctatcgcc tgcggctatg tgcaagagga
     1981 gtacagttgg gcgatgggct ttgcgctcgc cgccattggt atgctggcgg ggctggtgat
     2041 cttcctgtgt ggaaatcgtc atttcaccca cactaccggc gtgaataaag ccgtgttgtg
     2101 cgccagaaac tacctgctgc cgaactgggg ctggctgtta attctgctgg tagcggcgcc
     2161 gttgctgatt accgttctgt tctggaaaga atggtctgtc tatgccttaa tcgtggcgac
     2221 cgcgatcggc ctggtcgtgc tggcaaaaat ttatcgtcag gcgcaaacgg ccaaacaacg
     2281 caaagaactg gggctgattg tcaccctgac cctgttcagt atgctgttct gggcgtttgc
     2341 ccagcagggc ggcagttcta tcagcctgta tatcgaccgc tttgtgaacc gcgatattct
     2401 gggctattcc gttcctaccg ccatgttcca gtcggtgaac gcctttgccg tgatgctgtg
     2461 tggggtcgtc ctggcctggc tggttaaaga gagcgtaagc ggtaatcgca ccgtgcgtat
     2521 ctggggcaaa ttcgcgctgg gtctcggtct gatgagcgcc ggattctgta ttctgaccct
     2581 gagcgcacgc tggtccgccg cttacggaca ctcttcaatg ccgctaatgg tgctgggact
     2641 ggcggtgatg ggctttgccg agctgtttat cgacccggtc gccatgtcgc aaattacgcg
     2701 cattgatatc cccggcgtca ccggcgtatt aaccggaatt tatatgctgc tgtccggcgc
     2761 gatagctaac tatctggcag gcgtcatcgc tgaccagacc tcgcaaagcg ccttcgacgc
     2821 cagcggcgcg gttaattacg ccatcaacgc ctatgtggat gtttttgaac agatcacctg
     2881 gggcgcgtta gcctgtgtag gggttgtcct gctgatttgg ctgtatcagt ccttcaaatt
     2941 caaaagccgc gcgctggccg tcgaatcctg atagcagaag gcccggtagt ttgcgctacc
     3001 gggcctgtat cacgcccctt ttctcgccgc ctcataggcg gaaagcgttg cgattctcgc
     3061 ctgtttgtgc tccacaatag gccgaggata atcaagtacg actcccgctt tttccgccca
     3121 ccgccacggc tcgtgaatcg cttttccagg tatatcgcgt aatgccggta gccactggcg
     3181 gataaattcg ccgtcgcgat cgaacctctc tctctgagtc gtgggattaa aaatacgaaa
     3241 ataaggcgcg gcatcggtac cggttgaagc ggcccactgc cagccgccat tattggcggc
     3301 aagatcgccg tcaataagct gcgacatgaa atagcgctcc cccaaccgcc agtcaattag
     3361 cagatctttt accagaaagc tggcggtaat catgcgtaaa cggttatgca tccagcccgt
     3421 cgcgttaagc tggcgcatcg ccgcatcgac aatgggataa ccggtttcgc ctttctgcca
     3481 tgcctgaaaa tagtgcgggt tctcctgcca cgcgacgcgt tttgtccagc ggataaacgg
     3541 ctggtgtttg cataatgccg gataccaggt cattaaatga cggtaaaatt cccgccagat
     3601 gagctcattc aaccagacgc ttcccggccc gccgtccagc gcctgcggct
//
LOCUS       DAGWFR010000273         3645 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.276, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000273 DAGWFR010000000
VERSION     DAGWFR010000273.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 3645)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3645)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3645
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.276"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(411..1709)
                     /locus_tag="MOX77_004472"
     CDS             complement(411..1709)
                     /locus_tag="MOX77_004472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HCA3359848.1"
                     /translation="MQDDTLPLNNSNATTTPLSTRLPFTKYDFGWVLLCIGMAIGAGT
                     VLMPVQIGLKGIWVFITAFIIAYPATYIVQDIYLKTLSESETCDDYTDIISHYLGKNW
                     GVFLGVIYFLMIIHGVFIYSLSVVFDSASYIKTFGLTEADLSQSIIYKVAIFAVLVAI
                     ASGGEKLLFKISGPMVVVKVGIILIFGLAMIPHWNLDNISAFPAASVFFRDVLLTIPF
                     CFFSAVFIQVLNPMNIAYRKREPDRVLATRMAIRTHRISYITLIAIILFFSFSFTFSI
                     SHEEAVSAFEQNISALALAAQVIPGQIIHITSTILNIFAVLTAFFGIYLGFHEALKGI
                     VLNVLSRIMDVKNINPLLLTSGICVFIVVTLVIWVSFRVSVLVFFQLGSPLYGIVACI
                     IPFFLIYKVAQLEKLRGLKTWLILLYGILLCLSPLLKLIE"
     gene            complement(1827..2224)
                     /locus_tag="MOX77_004473"
                     /pseudo
     CDS             complement(1827..2224)
                     /locus_tag="MOX77_004473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133841.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
     gene            2352..2459
                     /locus_tag="MOX77_004474"
     CDS             2352..2459
                     /locus_tag="MOX77_004474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin Ldr family
                     protein"
                     /protein_id="HCA3359849.1"
                     /translation="MTLTQLGVAFWHDLAAPIIAGIIASVIVNWLRDRK"
     gene            complement(2541..>3645)
                     /gene="bcsG"
                     /locus_tag="MOX77_004475"
     CDS             complement(2541..>3645)
                     /gene="bcsG"
                     /locus_tag="MOX77_004475"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsG"
                     /protein_id="HCA3359850.1"
                     /translation="DMPAQTAPPTTANLNAWLNTFYAAEEKRKTTFPAQLPPDAQPFD
                     LLVINICSLSWSDVEAAGLMSHPLWSHFDILFKHFNSGTSYSGPAAIRLLRASCGQPS
                     HTRLYQPANNECYLFDNLAKLGFTQHLMMDHNGEFGGFLKEVRENGGMQSELMNQSGL
                     PTALLSFDGSPVYDDLAVLNRWLTGEEREANSRSATFFNLLPLHDGNHFPGVSKTADY
                     KIRAQKLFDELDAFFTELEKSGRKVMVVVVPEHGGALKGDRMQISGLRDIPSPSITNV
                     PAGVKFFGMKAPHEGAPIDINQPSSYLAISELVVRAVDGKLFTEDSVNWNKLTSNLPQ
                     TAPVSENANAVVIQYQGKPYVRLNGGDWVPYPQ"
BASE COUNT          954 a          902 c          969 g          820 t
ORIGIN      
        1 cctgtacgca gttacagccg cagcttaaag agtacgacgg ccagttggtg gcctgctttg
       61 ccgtcgatca ggatgaaaac ccgcagaagc cgctgagtta attgcgtttt atgccggatg
      121 gcggctgcgc cttatcaagc ctacacctta cttgtaggcc tggtaagcgt agcgccaccg
      181 ggcatggctc tccggtacga cttagagcct atcccattag ggctatttta cttgccattt
      241 tggacttggg cagtgctcgc caaaacgcgt tagcgttttg aacgccgcta gcggcggccc
      301 gaagggcgag cgtagcgagt caaacctcac gtactacgtg tacgctccgg tttttgcgcg
      361 ctgtccgtgt ccaaactggc tgtgccaata acgcctggtg ggataggctc ttattcaatc
      421 aattttaata acggcgacag gcacaacaat attccatata acagaataag ccaggttttc
      481 aggccgcgta atttttccag ttgcgctact ttataaatca ggaaaaaggg aataatacac
      541 gcgacaatgc cataaagcgg actgcctaac tggaaaaaga ccaatactga gacgcgaaac
      601 gaaacccaaa taaccagagt aaccacgata aagacacaga ttccagatgt cagtaacagt
      661 gggttgatgt ttttgacatc cataatgcga ctcaacacat tcagtacaat acctttaagc
      721 gcttcgtgaa aacctaaata aataccaaag aacgcggtaa gtacggcaaa aatattgagg
      781 atggtagagg taatgtggat gatctggcca gggattacct gagctgccag cgcaagagcg
      841 gaaatattct gctcgaacgc tgataccgcc tcttcatgac taatcgaaaa ggtaaacgaa
      901 aacgagaaaa agagaataat ggcaatcagc gtaatatagc taatgcgatg cgtgcgaatc
      961 gccatccggg tggccagcac acggtcaggt tcgcgcttac gataggcgat gttcattggg
     1021 tttagcacct gaatgaagac cgcagaaaag aagcaaaatg ggatagtgag cagtacgtcg
     1081 cgaaagaaaa ccgatgcggc gggaaaggcg gaaatattat caagattcca gtgtgggatc
     1141 atcgccaaac cgaatatcag aatgatcccg acttttacca ctaccatcgg gccggaaatt
     1201 ttaaataata gcttttcccc gccggaggca atcgccacca gcacggcgaa aatcgcgact
     1261 ttatagataa tagactgcga aagatcggcc tcagtaaggc cgaaggtttt gatataggag
     1321 gcgctatcaa acaccaccga cagggagtaa ataaacaccc cgtggataat cataagaaaa
     1381 tagattacac cgagaaaaac gccccagttt ttgccaagat agtgactgat aatatccgta
     1441 taatcgtcac aggtttcgct ttcagataac gtttttagat aaatatcctg cacaatatag
     1501 gtagcgggat aggcgatgat aaaagcggta ataaataccc agatcccctt gagaccgatt
     1561 tgcactggca ttaagacggt accggcgccg attgccatac cgatacacaa gagcacccag
     1621 ccaaaatcat attttgtaaa cggtaatctc gttgaaagcg gtgtggtcgt agcgttactg
     1681 ttatttaatg gtaatgtgtc gtcctgcata gagccccctg cccaaaatat acgcagctct
     1741 ctcataaaga atgctgccta taaccaggct atagtgcctt gatacccgat gcggcaaacc
     1801 ggtgacagcg gttcgccgag caatcgtcag aatgctgctt ttctgctggc gcgttcaagg
     1861 tcatgaataa tatcgtcggg atcttcaggt cccgctgaaa gacggataag ttcgtcggta
     1921 atacctgctt ttagccattc ctctggcgca acaggcgaat atgtcataga cgcaggatgc
     1981 tgaacgaggg tttcggtatc accgggactg gccgcgagga ggcataattt acagaattga
     2041 gcggctgact gccagcctca gaaatgctga atgtattctg gcaaataaaa gtagtcgtct
     2101 gcgaagcgtc acgcagattg cacgttagcg ccgtgccggg acggggattt tgccgtaata
     2161 tcagcagcaa gccgggttta cccggtgagg cgcaatgttg cgggggcttg agccccggcg
     2221 gcataggttg ctggatagag aaaacccccg cacgttgact ggtataaacc tggcaacctg
     2281 acgggggcta acttgaaccc aaacacttta aagatagccg cgaacggttg ccattgcaac
     2341 aaggcggcta tatgacgctt acgcagttgg gcgtggcctt ctggcacgat ctggcggcgc
     2401 cgatcattgc tggcattatc gccagtgtga tcgtcaactg gctacgtgac aggaagtaac
     2461 gcgttttgag cgtctgtccg ccgtaatggc aacatgcgcc cgagccaggc cgcaggggaa
     2521 accttgcggc ctttttcggt ttactgcggg taaggcaccc agtcgccgcc attcagacga
     2581 acgtagggct taccctggta ctgaatcacc accgcattag cgttttctga aaccggcgcg
     2641 gtttgcggca gattgctggt cagcttgttc cagttcacac tgtcttcggt aaagagctta
     2701 ccgtccacgg cgcgtacgac cagttcggaa atcgccaggt agctgctcgg ctgattaata
     2761 tcaatcggcg cgccctcatg cggggctttc atgccaaaaa atttcacgcc cgccgggacg
     2821 ttggtgatgg aggggctggg aatatcgcgc aggcctgaga tctgcattct gtcgcccttc
     2881 agcgcgccgc cgtgctccgg tacgacgact accatcacct tacgcccgga tttctccagt
     2941 tcggtaaaga aggcgtccag ttcatcgaac agtttctgcg cgcggatttt ataatccgcc
     3001 gttttgctga cgccagggaa gtggttgcca tcgtgcagcg gcagcaggtt aaagaaagtc
     3061 gcggagcggg aattggcttc acgttcttcc cctgttaacc agcggttcag gaccgccaga
     3121 tcgtcatata ccggcgagcc gtcgaatgac agcagggcgg ttggcaggcc ggactggttc
     3181 atcagttcgc tctgcatacc gccgttttcg cgaacttctt tcaggaagcc gccaaattca
     3241 ccgttatgat ccatcatcag atgctgagta aagcccagtt tcgccagatt atcaaacaga
     3301 taacattcgt tattggctgg ttgataaagt cgggtatgcg aaggttgacc acagctggcg
     3361 cgcagcagac gaatggccgc cgggccgctg taagacgtac cggaattaaa gtgtttaaac
     3421 aaaatgtcaa agtgcgacca tagcggatgt gacatcaggc ctgccgcttc gacatccgac
     3481 caggagagcg aacaaatatt gatgaccaat aggtcgaacg gctgcgcatc aggcggaagc
     3541 tgcgccggga acgtcgtttt ccgcttttct tccgcggcat agaaggtgtt caaccaggcg
     3601 ttcagattcg cggtcgttgg cggcgcggtt tgcgcaggca tatcg
//
LOCUS       DAGWFR010000274         3545 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.277, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000274 DAGWFR010000000
VERSION     DAGWFR010000274.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 3545)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3545)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3545
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.277"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..1155
                     /locus_tag="MOX77_004476"
     CDS             <1..1155
                     /locus_tag="MOX77_004476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine:cation symporter family protein"
                     /protein_id="HCA3359851.1"
                     /translation="FWMWVSAIIGMATSFAECSLAQLYKERDPTGQFRGGPAWYMARG
                     LGMRWMGVVFALFLLVAYGLIFNSVQANAVSRALHFAFNIPPLISGIALAFCALLIII
                     RGIKGVARLMQWLIPLIALLWVAGSVFICLWHIEQMPGVIASIVKSAFGWQEAAAGAA
                     GYTLTQAITSGFQRGMFSNEAGMGSTPNAAAAATSYPPHPVAQGIVQMIGVFSDTIII
                     CTASAMIILLAGNHASHSSTEGIQLLQHAMVSLTGEWGASFVALIVILFAFSSIVANY
                     IYAENNLFFLRLHNAKAIWLLRLATLGMVIAGTLISFPLIWQLADMIMACMAITNLTA
                     ILLLSPVVYTLAGDYLRQRKLGVRPQFDPRRFPDIEPQLAPDTWDAASRD"
     gene            1234..2007
                     /gene="yaaA"
                     /locus_tag="MOX77_004477"
     CDS             1234..2007
                     /gene="yaaA"
                     /locus_tag="MOX77_004477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide stress protein YaaA"
                     /protein_id="HCA3359852.1"
                     /translation="MLILISPAKTLDYQSPLATTRYTQPELLDHSQQLIQQARQLSAP
                     QISRLMGISDKLADLNATRFHDWQPHFTPDNARQAILAFKGDVYTGLQAETFNDADFD
                     FAQQHLRMLSGLYGVLRPLDLMQPYRLEMGIRLENPRGKDLYQFWGDIITDKLNEALE
                     AQGDRVVVNLASEEYFKSVKPKKLDAELIKPVFLDEKNGKFKVVSFYAKKARGLMSRF
                     IIENRLTKPEQLTAFDREGYFFDEETSTQDELVFKRYEQ"
     gene            complement(2101..3387)
                     /gene="thrC"
                     /locus_tag="MOX77_004478"
     CDS             complement(2101..3387)
                     /gene="thrC"
                     /locus_tag="MOX77_004478"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HCA3359853.1"
                     /translation="MKLYNLKDHNEQVSFAQAVTQGLGKQQGLFFPHDLPEFSLTEID
                     EMLNQDFVSRSAKILSAFIGDEIPQQILEERVRAAFAFPAPVAQVESDVGCLELFHGP
                     TLAFKDFGGRFMAQMLTHISGDKPVTILTATSGDTGAAVAHAFYGLENVRVVILYPRG
                     KISPLQEKLFCTLGGNIETVAIDGDFDACQALVKQAFDDEELKTALGLNSANSINISR
                     LLAQICYYFEAVAQLPQGARNQLVISVPSGNFGDLTAGLLAKSLGLPVKRFIAATNIN
                     DTVPRFLHDGKWAPKATQATLSNAMDVSQPNNWPRVEELFRRKIWRLTELGYAAVDDT
                     TTQQTMRELKAKGYISEPHAAVAYRALRDQLNPGEYGLFLGTAHPAKFKESVESILGE
                     TLALPEALAERADLPLLSHHLPADFAALRKLMMTRQ"
     gene            complement(3391..>3545)
                     /locus_tag="MOX77_004479"
     CDS             complement(3391..>3545)
                     /locus_tag="MOX77_004479"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459008.1"
                     /note="catalyzes the formation of O-phospho-L-homoserine
                     from L-homoserine in threonine biosynthesis from asparate;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HCA3359854.1"
                     /translation="SGSGPTLFALCDKPETAQRVADWLSKHYLQNQEGFVHICRLDTA
                     GARVVG"
BASE COUNT          762 a         1008 c          931 g          844 t
ORIGIN      
        1 ttctggatgt gggtctcggc catcattggt atggcgacct ccttcgccga gtgttcgctt
       61 gcccagcttt ataaagaacg tgacccgaca ggccagttcc gcggcggccc ggcgtggtat
      121 atggcgcgcg ggctgggaat gcgctggatg ggcgtggttt tcgccctctt tctgctcgtc
      181 gcctacgggt tgatttttaa tagcgtgcag gcgaatgccg tctcacgcgc gctccatttc
      241 gccttcaaca ttccgccgct tatctccggc attgctttgg cgttctgtgc cctgttaatt
      301 atcatccgcg gcataaaagg cgtcgcccgc ctgatgcaat ggctgattcc cctcatcgcg
      361 ttattgtggg tcgctggcag cgtattcatt tgcctctggc atattgagca aatgcctggc
      421 gttatcgcct cgatagtcaa aagcgcattt ggctggcagg aagccgcggc aggcgcagcc
      481 ggatatacgc tcacccaggc tattaccagc ggttttcagc gtgggatgtt ctctaatgaa
      541 gcgggaatgg ggtcaacgcc taatgcggcc gcagcggcaa cgtcgtatcc ccctcaccct
      601 gtcgcgcagg ggattgtgca aatgattggc gtattcagcg acaccattat catctgtacc
      661 gccagcgcga tgattatcct gctggcgggg aatcacgcgt cccattcgtc aacagaaggc
      721 attcagcttc tccaacatgc aatggtttcg ttgaccggtg aatggggcgc cagttttgtc
      781 gcgcttatcg tcattctgtt cgcgttcagt tctatcgtcg ccaactatat ttacgccgaa
      841 aacaatctct tttttctgcg gttacataac gcaaaggcca tctggctatt acgtcttgcg
      901 acgcttggca tggtcatcgc cggtacgctt atcagttttc cgctgatatg gcagctcgct
      961 gacatgatca tggcctgtat ggccattacc aatctgacgg cgattttgtt gctctcaccg
     1021 gtggtgtata ccctcgccgg cgattatctg cgacaacgga aactgggcgt aagaccgcag
     1081 ttcgatccgc ggcgcttccc ggatatcgaa ccacaactgg cgccagatac ctgggatgcg
     1141 gcatcgcgcg attaagccga caatcgcaac catcggtcaa ctctgcggcg tttttttgct
     1201 aaagtcgcag aaaattccct gcaaggactg gatatgctga ttctgatttc acctgcaaaa
     1261 acgcttgatt atcaaagccc gctggccacg acccgctata cccagccgga gctgttggat
     1321 cacagccagc agcttattca acaggcccgc cagctttcgg cgccgcaaat ttccaggcta
     1381 atgggaatta gcgacaaact ggcggatctc aacgccacgc gttttcatga ctggcagcct
     1441 cattttacgc cggataatgc acgccaggcg attctggcgt tcaaaggcga tgtttatacc
     1501 ggcctacagg cggaaacgtt caacgacgcg gattttgatt ttgctcaaca acatctgcgt
     1561 atgctctctg gcttgtatgg cgtattgcgc ccgctggatt taatgcagcc ttatcgtctg
     1621 gagatgggga ttcgcctgga gaatccgcgc ggcaaagatc tttatcaatt ctggggcgat
     1681 atcattaccg ataagctcaa cgaagcgctt gaggcgcagg gcgatcgggt ggtggtgaat
     1741 ctggcctccg aggaatattt taaatcggtg aagccgaaga aactggatgc cgaactgatt
     1801 aagcccgtat tccttgatga gaaaaacggc aagtttaagg tggtaagctt ctacgccaaa
     1861 aaagcgcgcg gactgatgag tcgttttatt attgaaaacc gcttaacgaa gccggaacag
     1921 cttaccgcgt ttgaccgtga agggtatttc tttgatgaag aaacctccac acaagacgag
     1981 ctggtcttta aacgctacga gcagtaacga catcgccgga tggcggttac gccttatccg
     2041 gcctacaaat cggcaccacc ccataggccc ggtaagcgac agcgccaccg ggcgcaatgg
     2101 ttactggcgg gtcatcatta gcttacgcag ggcggcaaaa tccgcaggca gatgatgtga
     2161 aagcaacggc agatcggcgc gttcggcgag cgcttcaggc aatgccagcg tttctcccag
     2221 aatggactcc acgctttctt taaacttcgc cggatgcgcc gttccgagaa acaagccata
     2281 ctcgccaggg tttaactggt cgcgtaatgc ccgatacgct accgccgcat gaggttccga
     2341 gatataacct ttcgctttca gctcgcgcat cgtctgttgt gtcgtagtgt catccaccgc
     2401 cgcatagccc agctcagtca gacgccagat tttacggcgg aatagctcct ccacacgcgg
     2461 ccagttattc ggctggctga catccatcgc attcgacagg gtcgcctgcg tcgcttttgg
     2521 cgcccacttc ccgtcatgca gaaaacgcgg caccgtatcg ttaatgttgg tggcggcgat
     2581 aaagcgtttc accggtaggc ctaacgactt cgccagcagt cctgccgtca aatcgccaaa
     2641 gttgccgctg ggtacggaga tcaccagttg gttacgcgcc ccctgcggca gttgcgccac
     2701 ggcttcaaag tagtagcaaa tttgcgccag caggcggctg atattaatcg aattagccga
     2761 attcaacccc agcgccgttt tcagttcttc gtcatcaaat gcctgtttca ccagcgcctg
     2821 gcaagcgtcg aaatcgccgt cgatcgccac ggtctcaatg ttgccgccca gcgtacagaa
     2881 cagtttttcc tgcaacggac tgattttacc gcgcgggtag agaatgacga cccgcacatt
     2941 ttccaggcca tagaacgcgt gagccaccgc cgcgccggta tcgcctgacg ttgcggtcag
     3001 aatcgtcacc ggtttatcgc cgctgatatg cgtcagcatt tgcgccataa aacgcccgcc
     3061 gaagtcttta aaggccagcg tcggaccatg gaacagctcc aggcagccga catcactttc
     3121 tacctgcgct accggcgccg ggaaagcaaa cgccgcgcgg acgcgctctt ccagaatttg
     3181 ctgcggtatt tcatcgccaa taaatgccga gaggatcttt gcgctacggc tgacaaagtc
     3241 ctggttgagc atctcatcaa tttccgtcag gctaaactcc ggcagatcgt gcggaaaaaa
     3301 aagtccctgc tgtttgccca gcccttgcgt gacggcctgc gcaaagctga cctgctcatt
     3361 atggtctttc agattataga gtttcattga ttatcccact actcgtgcgc ccgccgtatc
     3421 cagccgacaa atatgaacga agccttcctg attttgcaga taatgtttgc tcagccagtc
     3481 cgcgacgcgc tgcgccgtct ccggtttatc gcatagcgca aacagcgtcg gccccgatcc
     3541 ggaaa
//
LOCUS       DAGWFR010000275         3538 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.278, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000275 DAGWFR010000000
VERSION     DAGWFR010000275.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 3538)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3538)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3538
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.278"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..706)
                     /locus_tag="MOX77_004480"
     CDS             complement(<1..706)
                     /locus_tag="MOX77_004480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribodipyrimidine photo-lyase"
                     /protein_id="HCA3359855.1"
                     /translation="MPTHLVWFRRDLRLQDNLALAAACRDASARVLALYISTPAQWQA
                     HDMAPRQAAFISAQLNALQTALAEKGIPLLFHEVADFNASIETVKNVCRQHDVSHLFY
                     NYQYEFNERQRDAAVEKTLPSVICEGFDDSVILAPGAVMTGNHEMYKVFTPFKNAWLK
                     RLKEDIPPCVPAPKIRVSGALSIPLTPVSLNYPQQAFDAALFPVEENAVIAQLRHFCS
                     QGADEYASRRDFPAVDG"
     gene            complement(817..1023)
                     /locus_tag="MOX77_004481"
     CDS             complement(817..1023)
                     /locus_tag="MOX77_004481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbfA family protein"
                     /protein_id="HCA3359856.1"
                     /translation="MEHYKDYPAHVIFARRAFAVTAGVLALPVMLFWKDRARFYSYLH
                     RVWSKTSDKPVWMAQAEKATCDFY"
     gene            1360..1449
                     /gene="kdpF"
                     /locus_tag="MOX77_004482"
     CDS             1360..1449
                     /gene="kdpF"
                     /locus_tag="MOX77_004482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="K(+)-transporting ATPase subunit F"
                     /protein_id="HCA3359857.1"
                     /translation="MSAGVITGIVLVFLLLGYLVYALINAEAF"
     gene            1449..3128
                     /gene="kdpA"
                     /locus_tag="MOX77_004483"
     CDS             1449..3128
                     /gene="kdpA"
                     /locus_tag="MOX77_004483"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpA"
                     /protein_id="HCA3359858.1"
                     /translation="MAAQGFLLIASFLLILLVLAKPLGSGLARLIAAVPLPGVAGVER
                     ILWRTLGITDHEMNWRQYLLALLTLNLLGLGILFCLLFWQEWLPLNPQRLPGLSWDLA
                     LNTAVSFVTNTNWQAYSGESTLSYFSQMAGLTVQNFLSAATGIAVVFALIRAFTRQNV
                     HTLGNAWQDLVRITLWILFPVALIIALFFIQQGVPQNLSAYQPITTLEGAKQLLPMGP
                     VASQEAIKMLGTNGGGFFNANSSHPFENPTALTNLAQMLAIFLIPAALCFAFGEAAGD
                     RRQGRALLWAMSFIFVVCVAVVMWAEVQGNPHLLAAGADSSVNMEGKEARFGVLASSL
                     FAVVTTAASCGAVNAMHDSFTALGGMVPMWLMQIGEVVFGGVGSGLYGMLLFVLLAVF
                     IAGLMIGRTPEYLGKKIDVREMKMTALAILVTPMLVLLGSALAMMTDAGRSAMLNPGP
                     HGFSEVLYAVSSAANNNGSAFAGLSANSPFWNCLLAFCMFVGRFGVIIPVMAIAGSLV
                     SKKVQPASQGTLATHGALFIGLLIGTVLLVGALTFIPALALGPVAEHFSLP"
     gene            3149..>3538
                     /locus_tag="MOX77_004484"
     CDS             3149..>3538
                     /locus_tag="MOX77_004484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase"
                     /protein_id="HCA3359859.1"
                     /translation="MSRKQLALFEPVLLVQALTDAVKKLSPRAQWRNPVMFVVWAGSV
                     LATLLTLAMVTGQIAGSALFTGVISLWLWFTVLFANFAEALAEGRSKAQANSLKGVKK
                     TAFARRLRAPRHDAQADNVPAAELRKGD"
BASE COUNT          752 a          938 c          989 g          859 t
ORIGIN      
        1 tgccgtcaac cgcagggaaa tcgcgccgtg acgcatactc gtctgcgccc tgcgagcaaa
       61 aatgacgtag ctgcgcgatg accgcgtttt cttccaccgg gaaaagcgcg gcgtcaaacg
      121 cctgttgcgg gtagttaagc gagactggcg ttaagggtat agaaagcgcg ccgctcaccc
      181 ggatcttcgg ggccggaacg cacggcggga tatcctcttt tagccgtttc aaccaggcgt
      241 ttttaaacgg cgtaaaaact ttatacattt catgattgcc ggtcatcacc gcgccgggcg
      301 ccagaatcac gctatcgtca aagccttcgc agatgacaga tggcagcgtt ttttccaccg
      361 ccgcatcacg ctgacgctcg ttaaactcat actgatagtt ataaaacaga tggctgacgt
      421 catgctgccg gcaaacgttt ttaaccgtct caatactggc gttaaaatcc gccacttcat
      481 gaaacagcag cggaatccct ttctctgcaa gggccgtctg tagcgcattg agctgcgcgc
      541 tgatgaatgc cgcctgccgc ggcgccatat catgggcctg ccactgggcg ggggtggaaa
      601 tataaagcgc cagcacccgc gcggatgcat cgcggcaggc ggcggccagc gcaaggttat
      661 cctgtaaacg cagatcgcgc ctgaaccaga ctaaatgggt gggcatacaa ctcctgaaag
      721 atgaaacgtc acggcgaata gcgttaaaca gtgtagaccc tggcgcataa aaaaaccgcc
      781 agcgtggcgg ctgacggttt ttcaggctgg tcgcgattaa taaaagtcgc aggtggcttt
      841 ttcagcctgc gccatccata ccggtttatc actggttttc gaccagacac ggtgcagata
      901 actataaaaa cgcgcgcggt ctttccagaa gagcatcacc ggcaacgcca gcacgcctgc
      961 ggtcaccgcg aaagcacgac gtgcaaaaat gacatgcgct ggatagtctt tatagtgttc
     1021 catacgtttc ccccctttat accgacgcta tccgccccgg tatagattga atcggtgaat
     1081 agcaccgaaa aattgaacct cgttacctga ttaaaatagt accgctttcg gtgtaatttc
     1141 actactcatc cgaccactta ttttcacgct tttccagcag atttacattc aaagcgtaaa
     1201 ttagttacaa aaaggttaaa ttaatactaa tcattagtta aataatggtc tttgccattt
     1261 ttatactttt tttacactcc gcccgccaat ttttgcgaaa tctttgcagc caaaaaatta
     1321 cctttctcag gagtaaaaca atgccactgg aggtgctctg tgagtgcagg cgtgataacc
     1381 ggcatcgtgc tggttttctt acttttaggt tatctggtct atgccctgat taatgcggag
     1441 gcgttctgat ggccgcgcaa ggatttttac tgatcgccag ttttttactg attttattgg
     1501 tactggcgaa accgttgggt tcgggcctgg caaggctcat cgccgccgtt ccgttgccgg
     1561 gcgtggctgg cgttgagcgt atcctctggc ggactcttgg cattaccgac cacgaaatga
     1621 actggcgtca gtatttactg gcgctactga cgctcaatct gctgggactg ggcatcctgt
     1681 tttgcctgct attctggcag gagtggctgc ccttaaatcc gcagcggcta ccggggctgt
     1741 cctgggatct ggcgctgaat accgccgtca gctttgtcac caataccaac tggcaagcct
     1801 acagcggcga aagcacgctg agctacttta gccagatggc ggggctgacg gtgcaaaatt
     1861 tcctgtcggc ggcgaccggg attgcggtgg tttttgcact tatccgcgcc tttacgcgcc
     1921 agaatgtgca cacgctgggt aatgcctggc aggatctggt acgcattacg ctatggatat
     1981 tatttcctgt cgcgttaatt atcgcgctgt tttttatcca acagggcgta ccgcaaaacc
     2041 tgtcggctta tcagcccatc accactcttg aaggcgctaa acaactcttg ccgatggggc
     2101 cggttgcttc gcaggaggcg atcaaaatgc ttggcaccaa cggcggaggt ttctttaacg
     2161 ccaactcttc gcatccgttc gaaaatccca ccgcgctcac taatctggcg cagatgctgg
     2221 cgatattttt gattccagcc gcgctctgtt tcgcctttgg cgaagcggcg ggcgatcgcc
     2281 gtcagggacg cgccctactg tgggcaatgt cattcatttt tgtggtctgc gtagcggtag
     2341 tgatgtgggc ggaagttcag ggaaatccac atctgttggc ggcaggcgcg gacagtagcg
     2401 tcaacatgga aggtaaagag gcacgctttg gcgtgctggc cagcagcctg tttgccgtcg
     2461 tcacgaccgc ggcgtcctgc ggggcggtaa atgccatgca cgactcgttt accgctctgg
     2521 gcggtatggt gccgatgtgg ctgatgcaaa ttggcgaagt ggtctttggc ggcgtcggtt
     2581 cagggctgta cggcatgttg ctgtttgtcc tgttggcggt gtttatcgcg gggctgatga
     2641 tcggtcgcac gccggagtat ctggggaaaa aaatcgacgt gcgcgaaatg aaaatgaccg
     2701 cgctggcgat tctggtcacg ccgatgctgg tcttgttggg ttcggcgctg gcgatgatga
     2761 cggatgccgg acgcagcgca atgctgaacc ctggcccgca cggttttagc gaagtgctat
     2821 atgccgtctc ctctgccgcc aacaacaacg gtagcgcctt tgcaggtctg agcgctaact
     2881 cgcctttctg gaactgtttg ctggcgttct gcatgttcgt cggacgtttc ggcgtgatta
     2941 ttcctgtcat ggccatcgcc ggatcgctgg tcagtaaaaa agtacagccg gccagtcagg
     3001 gaacgctggc gacccacggc gcgctattta ttggactgct cattggcacg gtactgctgg
     3061 tcggcgcgct gacgtttatt cctgccctgg cgcttggccc ggtagcggaa catttctctt
     3121 taccttgagc gatgcggagt acattgatat gagtcgcaag caactggcgc tgtttgaacc
     3181 tgttttactc gtacaggcgc taacggatgc cgtaaaaaaa ttaagcccac gcgcccagtg
     3241 gcgtaacccg gtgatgtttg tggtctgggc cggcagcgtg ctagccactc tgttaacgct
     3301 cgctatggta acaggacaaa tagcgggaag cgccttgttt acaggggtga tcagcctgtg
     3361 gttatggttc accgtactgt tcgccaattt tgccgaagca ctggcggaag gccgcagcaa
     3421 agcccaggca aacagtctga aaggggtgaa aaagaccgcg ttcgctcgcc gtctgcgcgc
     3481 cccgcgccat gatgcgcagg ccgataacgt gcccgccgct gaactgcgga aaggcgac
//
LOCUS       DAGWFR010000276         3525 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.279, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000276 DAGWFR010000000
VERSION     DAGWFR010000276.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 3525)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3525)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3525
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.279"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(29..1267)
                     /gene="alaC"
                     /locus_tag="MOX77_004485"
     CDS             complement(29..1267)
                     /gene="alaC"
                     /locus_tag="MOX77_004485"
                     /EC_number="2.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine transaminase"
                     /protein_id="HCA3359860.1"
                     /translation="MADSRPERRFTRIDRLPPYVFNITAELKMAARRRGEDIIDFSMG
                     NPDGATPPHIVEKLCTVAQRPDTHGYSTSRGIPRLRRAISHWYQERYDVDIDPETEAI
                     VTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFNE
                     LERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVY
                     DGWKAPSIMQVPGARDVAVEFFTLSKSYNMAGWRIGFMVGNKTLVSALARIKSYHDYG
                     AFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEAGWMVEMPKASMYVWAKI
                     PEQYAAMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIENRDRIRQAVRGIKT
                     MFRADGVLPSHPKPVEASTE"
     gene            complement(1990..2955)
                     /gene="glk"
                     /locus_tag="MOX77_004486"
     CDS             complement(1990..2955)
                     /gene="glk"
                     /locus_tag="MOX77_004486"
                     /EC_number="2.7.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucokinase"
                     /protein_id="HCA3359861.1"
                     /translation="MTKYALVGDVGGTNARLALCDIASGEISQAKTYSGLDYPSLEAV
                     VRVYLDEHGVSVEDGCIAIACPITGDWVAMTNHTWAFSIAEMKKNLGFSHLEIINDFT
                     AVSMAIPMLKKEHLIQFGGGEPVDGKPIAVYGAGTGLGVAHLVHVDKRWISLPGEGGH
                     VDFAPNSEEEAMILEILRAEIGHVSAERVLSGPGLVNLYRAIVKSDNRLPENLRPKDI
                     TERALADSCIDCRRALSLFCVIMGRFGGDLALTMGTFGGVYIAGGIVPRFLEFFKASG
                     FRGGFEDKGRFKDYVHGIPVYLIVHDNPGLLGSGAHLRQTLGHIL"
     gene            3159..>3525
                     /locus_tag="MOX77_004487"
     CDS             3159..>3525
                     /locus_tag="MOX77_004487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ion channel protein"
                     /protein_id="HCA3359862.1"
                     /translation="MFHPRARTMLLLSLPALIIGVASSLVLIASMKVASVFQQFLWQR
                     LPASIGIAYDSPFWIVGMLTLTGIVVGLIIRYSPGHAGPDPAIEPLISMPVSPSALPG
                     LLLALIIGLAGGVSLGPEHP"
BASE COUNT          888 a          966 c          839 g          832 t
ORIGIN      
        1 aggagccatg gggctcctgt ttgcttttct actccgtgct cgcttcaacg ggttttggat
       61 gtgacggcag cacgccatcg gcgcggaaca tcgttttaat ccctctgacg gcctggcgaa
      121 tgcgatcgcg attctctatt aatgcaaagc gtacatgggt gtcgccatag tcaccaaagc
      181 ctatccctgg agaaacgcaa accttcgcct cattcagcag cttcttggca aactcaagcg
      241 atcccatcgc cgcatattgc tccgggattt tcgcccagac gtacattgag gctttcggca
      301 tttcaaccat ccagcccgcc tcatgcagtc ccttcaccag cacatcgcga cgacgcttat
      361 actgctcggc gatatcgcgc acgcactgct gatcgccttc cagagcggcg atagccgcca
      421 cctgaagcgg ggtaaaagca ccataatcgt gataactttt aatgcgcgcc agcgcgctga
      481 ccagggtttt attgcccacc ataaacccaa tacgccagcc cgccatatta tagcttttcg
      541 acagtgtgaa aaattcgacc gccacgtcgc gcgcgccggg cacctgcata atggatggcg
      601 ctttccagcc gtcgtacacg atatcggcat acgccagatc gtgcaccacc agcacatcat
      661 aacgtttagc cagagcgacc actttttcaa aaaattccag ttcgacgcac tgggccgtag
      721 ggttagacgg aaaacccaaa atcatcattt tcggtttcgg ataactttcg cgaatagcgc
      781 gctccagctc gttgaagaaa tccaccccct ctaccaatgg aaccgaacgc acctgcgccc
      841 cggcgataac ggcgccatag atatgaatcg ggtaactggg gttcggcacc agaaccgtat
      901 cgccatgatc cagcgtcgcc agcattaaat gcgccagtcc ctctttggaa ccgatggtca
      961 caatcgcttc ggtttccgga tcgatatcga catcataacg ttcctgatac cagtgagaaa
     1021 tcgcgcggcg taaacgcggt atgccgcggg acgtggaata accgtgcgta tccggacgct
     1081 gcgcgacggt gcaaagtttt tcgacaatgt ggggaggggt tgcgccatca ggattaccca
     1141 tactgaaatc aataatatct tcgccgcgcc gacgcgcagc cattttgagt tcagcggtga
     1201 tgttaaaaac atagggcgga aggcgatcga tacgcgtaaa gcgacgttca gggcgggagt
     1261 cagccataat atcctcagat taacgttagc gcccggaccg tccgagcgac gctgccacga
     1321 tggtggctcc tttagaaaat agcctgaaaa ttttcttcct gtcgagaggc taatgaaaat
     1381 attttttagc gacgaaaaag aggaacaacc gtaaaaattt actttttaag cgtgtcagtt
     1441 atagcaccaa ataaatcaca tcattaacaa attgatatca ttgaatttac ctaacgcggt
     1501 atggccgacg ataatttcct gtcaataaac cttatctcaa ataatcccct tttgattttg
     1561 tggtttttcc tctttaatca aaagccttac taacgataat ggtattcgtt catgtcatat
     1621 tgcggtattt ttcagggata tttccccgaa aataaggatc ctttccggca agctgccgcg
     1681 atgaaagcgt aaataaggca gcgaaccgga tacgtacagt aaaataaatc cctgttttcg
     1741 cctgagtaat caccatgacg tgatgactca acgcgctggt gtttgacttt tcgctcagca
     1801 agagtaaagt gaaataattc agtcagttga agtattcata cacaggaacg gcaatgaaaa
     1861 aaaaccgcgt gaggcacgcg gtttgagact gacaagagaa tgtttcattg cctgatgacg
     1921 ctgcgcttat caggcctaca gatgacacac ttttgtaggc cggataaggc gtttatgccg
     1981 ccgtctgact tatagaatat ggcctaatgt ctggcgcaga tgcgcgccgg agcctaacaa
     2041 gccgggatta tcatggacaa tcagatagac cggaataccg tgtacataat ctttaaagcg
     2101 gcctttatct tcaaagcccc cacggaagcc agacgcttta aagaattcca ggaagcgcgg
     2161 gacaatgccg ccagcgatat aaacgccgcc aaatgtcccc atggttaacg ccagatcgcc
     2221 gccaaatcgc cccatgatga cgcaaaagag cgacaacgcg cggcgacaat cgatacagct
     2281 atccgccagg gcgcgttcgg taatatcttt cgggcgcaga ttttccggca gacggttgtc
     2341 ggacttaaca atcgcccggt aaagattcac cagccccggg ccagacagca cgcgctcggc
     2401 ggaaacgtgg ccaatttcgg cgcgcaatat ttccagaatc atagcttctt cttcgctatt
     2461 aggcgcaaaa tcgacatgcc cgccttcgcc cggaaggcta atccaacgct tatccacatg
     2521 caccagatgc gccacgccca agccggttcc cgcgccgtac accgcaatag gtttgccgtc
     2581 taccggttcg ccgccgccga actgaattaa atgctctttt ttcagcatcg ggatcgccat
     2641 cgacacggcg gtgaaatcgt tgatgatttc cagatgacta aagccgagat tttttttcat
     2701 ttccgcaata gaaaaagccc aggtatggtt agtcatcgcc acccagtcgc cggtaatcgg
     2761 gcaggctatg gcgatacaac catcttccac gctgacgcca tgctcatcga gataaacgcg
     2821 caccacggcc tcaagactgg ggtaatccag gccggaatac gttttggcct gcgagatttc
     2881 tccactggcg atatcacaca gggcaagacg cgcattcgtg ccgcctacat ctcctactaa
     2941 agcatacttt gtcattcttc tactactccg ctaaagtcaa aataagtctt tgtcacactg
     3001 taaattcatg ggggcataac aacaacggcc atcaggctga ctgcctataa atatagatct
     3061 tcatcacaga attactttct tgtttcagca ccaattgcag caatgccgtc gggcaggctg
     3121 tgcaaaatag atatacgacc ccgtgtaagg aagagattat gttccacccg cgtgcccgaa
     3181 cgatgctgct gctgtcgctc cctgcgctga ttattggcgt agcgtcaagc ctagttttaa
     3241 tcgcctcgat gaaagtcgcg tcggtttttc agcaatttct ttggcaacga ctgcccgcca
     3301 gcatcggaat cgcttatgat tcgccgttct ggatagtggg tatgctcacg ctaaccggga
     3361 tcgtggtggg tttgattatc cgttacagtc ccggacacgc tggccccgat ccggccatcg
     3421 aaccgttaat cagtatgccg gtctcgccat ctgcgctgcc cgggctgctt ctcgccttaa
     3481 tcatcggcct tgctggtggg gtaagtttgg ggccagagca tccga
//
LOCUS       DAGWFR010000277         3523 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.280, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000277 DAGWFR010000000
VERSION     DAGWFR010000277.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 3523)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3523)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3523
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.280"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..251
                     /gene="lpxB"
                     /locus_tag="MOX77_004488"
     CDS             <1..251
                     /gene="lpxB"
                     /locus_tag="MOX77_004488"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459234.1"
                     /note="catalyzes the formation of lipid A disaccharide
                     from UDP-2,3-diacylglucosamine and
                     2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is
                     a precursor of lipid A that anchors LPS to the OM; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HCA3359863.1"
                     /translation="WLAKRLVKTEYVSLPNLLAGRELVKELLQEECEPQKLAEALLPL
                     LANGKTSHAMHDTFRELHQQIRCNADEQAADAVLELAQ"
     gene            248..844
                     /gene="rnhB"
                     /locus_tag="MOX77_004489"
     CDS             248..844
                     /gene="rnhB"
                     /locus_tag="MOX77_004489"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HCA3359864.1"
                     /translation="MIEFVYPHTHLVAGVDEVGRGPLVGAVVTAAVILDPARPIVGLN
                     DSKKLSEKRRLSLYDEIKEKALSWSLGRAEAHEIDELNILHATMLAMQRAVAGLHIAP
                     EYVLIDGNRCPELPVPSMAVVKGDSRVAEISAASILAKVTRDAEMAALDIVFPQYGFA
                     QHKGYPTAFHLEKLAQYGATAHHRRSFAPVKRALGLVS"
     gene            868..>3523
                     /gene="dnaE"
                     /locus_tag="MOX77_004490"
     CDS             868..>3523
                     /gene="dnaE"
                     /locus_tag="MOX77_004490"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HCA3359865.1"
                     /translation="MSEPRFVHLRVHSDYSMIDGLAKTGPLVKKAASLGMPALAITDF
                     TNLCGLVKFYGAGHGAGIKPIVGADFNVHNELLGDELTHLTVLAANNTGYQNLTLLIS
                     KAYQRGYGAAGPIIERDWLVELKEGLILLSGGRMGDVGRCLLRGNQALVEECVAFYEA
                     HFPDRYFLELIRTGRQDEETYLHAAVELAEARGLPVVATNDVRFLESDDFDAHEIRVA
                     IHDGFTLDDPKRPRNYSPQQYMRSEEEMCELFSDIPEALENTVEIAKRCNVTVRLGEY
                     FLPQFPTGDMTTEDYLVKKSKEGLEERLAFLFPDEEERKKRRPEYDERLDIELQVINQ
                     MGFPGYFLIVMEFIQWSKDNGVPVGPGRGSGAGSLVAYALKITDLDPLEFDLLFERFL
                     NPERVSMPDFDVDFCMEKRDQVIEHVADMYGRDAVSQIITFGTMAAKAVIRDVGRVLG
                     HPYGFVDRISKLVPPDPGMTLAKAFEAEPQLPEIYEADEEVRALIDMARKLEGVTRNA
                     GKHAGGVVIAPTKITDFAPLYCDEEGKHPVTQFDKSDVEYAGLVKFDFLGLRTLTIIN
                     WALEMINKRRAKNGEPPLDIAAIPLDDKKSFDMLQRSETTAVFQLESRGMKDLIKRLQ
                     PDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREELSYPDVQWQHESLKPVLEPTYG
                     IILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEMAKQRSVFEEGAKKNGIDGEL
                     AMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPAEFMAAVMTADMDNTEKVV
                     GLVDECWRMGLKILPPDINSGLYHFHVNDEGEIVYGIGAIKGVGEGPIEAIIDARNQG
                     GYFRELFDLCARTDTKKLNRRVLEKLIMS"
BASE COUNT          793 a          883 c         1072 g          775 t
ORIGIN      
        1 tctggctggc gaaacgtctg gtgaaaacgg agtatgtgtc tttgcctaac ctgctggcgg
       61 gaagagaatt agtcaaagag ctgttgcagg aagagtgcga accgcaaaaa ctcgccgaag
      121 cgctgttgcc gctactggcg aacggtaaaa ccagccatgc gatgcacgac accttccgtg
      181 aattgcatca gcagatccgc tgtaatgccg atgagcaggc ggcagatgcc gtcctggagt
      241 tagcacaatg atcgaatttg tttatccaca cacccattta gtggcgggtg tggatgaagt
      301 gggccgtggc ccgctggtgg gcgccgtagt gaccgccgcc gtgatcctcg atccggcgcg
      361 tccgatcgtc ggtctgaatg attccaaaaa attgtctgaa aagcgtcgtc tgtcattgta
      421 tgacgagatt aaagaaaagg cgttaagctg gagtctggga cgcgcggaag cgcatgaaat
      481 tgatgagctg aatattttgc acgccaccat gctcgccatg cagcgcgctg tcgctggtct
      541 gcatattgcg ccagaatatg tgctgatcga cggcaatcgc tgtccggagc tgcctgtgcc
      601 gtcaatggcc gtggtgaaag gcgacagccg cgtggcggag attagcgcgg cgtctattct
      661 ggcgaaagtc acccgcgacg cagaaatggc ggcgctggat atcgtttttc ctcagtatgg
      721 ctttgcgcag cacaaaggct atccaaccgc ttttcatctg gaaaagttgg cccagtatgg
      781 cgcgacggcg caccaccgac gcagttttgc gcctgttaaa cgcgctctgg gacttgtgtc
      841 ctgattcttg tatcgagaaa tctgaagatg tctgaaccac gtttcgttca cctgcgggtg
      901 cacagcgact actctatgat cgatgggctg gcgaagaccg ggccgctggt gaaaaaggcg
      961 gcctcattag gtatgcctgc gctggcgatc accgatttta ccaacctctg cggtctggtg
     1021 aagttctacg gagcgggtca tggcgcgggc attaaaccca tcgtcggggc ggactttaac
     1081 gttcacaacg aactgctggg agatgagctg actcatctga cggtactggc ggcgaataat
     1141 acgggatacc agaacctgac gttgctgatc tcgaaagcgt atcagcgcgg ctacggcgcg
     1201 gcaggcccga ttatcgagcg cgactggctg gtagagctta aagaaggttt gatcctgctt
     1261 tccggcgggc gcatgggcga cgtaggccgc tgtctgctac gcggcaacca ggcgctggtg
     1321 gaggagtgcg ttgctttcta tgaagcgcat tttcccgatc gctacttcct ggaactgatc
     1381 cgtaccggca gacaggatga agagacctat ctccatgctg cggttgagct ggctgaggca
     1441 cgtggtttgc cggttgtcgc gacaaacgat gtccgtttcc ttgaaagcga tgattttgac
     1501 gcccatgaga ttcgtgtcgc gattcacgac ggtttcacgc tcgacgatcc taaacgtcca
     1561 cgcaattatt caccgcagca gtatatgcgc agtgaagaag aaatgtgcga gctgttctcc
     1621 gatattccgg aggcgctgga aaatacggtg gagattgcca aacgctgcaa cgtaacggtg
     1681 cgtctgggtg aatatttcct gccgcagttc ccgaccggcg atatgaccac cgaagattat
     1741 ctggtcaaaa aatcgaaaga ggggctggaa gagcgtctgg ctttcctgtt tccggacgaa
     1801 gaagagcgca aaaagcgtcg cccggaatat gacgagcgtc tggatattga actacaggtt
     1861 atcaaccaga tggggttccc tggctacttc ctcatcgtga tggagtttat ccagtggtca
     1921 aaagataacg gcgtgccggt agggccggga cgtggttccg gggccggttc gctggtggcc
     1981 tacgcgctga aaattaccga ccttgatccg ctggaatttg acctgctgtt cgaacgtttc
     2041 ctgaacccgg aacgtgtctc gatgcctgac ttcgacgttg acttctgtat ggagaaacgc
     2101 gaccaggtga ttgagcacgt cgcagacatg tacgggcgtg atgcggtatc gcagattatc
     2161 accttcggta cgatggcggc gaaagccgtt atccgcgatg tgggccgcgt gctggggcat
     2221 ccgtacggtt ttgtcgatcg tatctcgaag ctggtgccgc ccgatccggg catgacgctg
     2281 gcaaaagcct ttgaagcgga accgcaacta ccggaaattt acgaggcgga tgaagaggtc
     2341 agagcgctga tcgatatggc gcgtaagctc gaaggcgtca cgcgtaacgc cggtaagcac
     2401 gctggcggcg tggtcatcgc gccgaccaaa attaccgact ttgcgccgct gtactgcgat
     2461 gaagagggca agcatccggt tacccagttt gataaaagcg acgtggaata tgccgggctg
     2521 gtgaagttcg acttcctcgg tttgcgtacg ctgactatca tcaactgggc gctggagatg
     2581 atcaacaagc ggcgggcgaa gaatggcgag ccaccgctgg atatcgccgc cattccgctg
     2641 gacgataaaa aaagcttcga catgctgcaa cgctcggaaa ccacggcggt cttccagctt
     2701 gaatcgcgcg gtatgaaaga cctgatcaag cgtctgcaac ctgactgctt tgaagatatg
     2761 atcgcgctgg tggccctgtt ccgtcccggc ccgttgcagt cagggatggt agataacttt
     2821 atcgatcgta agcacggtcg tgaagaactc tcttacccgg acgttcagtg gcagcatgaa
     2881 agcctgaagc cggtactgga gccgacctac ggcatcattc tgtatcagga acaggtgatg
     2941 cagattgccc aggtactttc cgggtatact ctcggtggcg cggatatgct gcgtcgtgcg
     3001 atgggtaaga aaaagccgga ggagatggcc aaacagcgtt ccgtttttga agagggcgcg
     3061 aaaaagaacg gtatcgacgg cgaactggcg atgaaaatct ttgacctggt ggagaaattc
     3121 gccggttacg ggtttaacaa atcgcactcc gccgcttatg cgctggtttc ttatcagacg
     3181 ctatggctaa aggcgcacta tccggctgaa tttatggcgg cggtgatgac tgccgatatg
     3241 gacaacaccg agaaggtcgt cggcctggta gacgagtgct ggcggatggg actgaaaatt
     3301 ctgccgccgg atattaactc cggattgtac catttccacg ttaatgatga gggcgagatc
     3361 gtctacggca tcggcgcgat caaaggcgtc ggcgaagggc cgatcgaagc gatcatcgac
     3421 gcgcgtaatc agggcggcta tttccgcgaa ctgtttgatc tgtgcgcgcg gaccgacacc
     3481 aaaaagctca accgccgggt gctggaaaag ctgatcatgt ccg
//
LOCUS       DAGWFR010000278         3506 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.281, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000278 DAGWFR010000000
VERSION     DAGWFR010000278.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 3506)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3506)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3506
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.281"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..516)
                     /gene="bcsG"
                     /locus_tag="MOX77_004491"
     CDS             complement(<1..516)
                     /gene="bcsG"
                     /locus_tag="MOX77_004491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsG"
                     /protein_id="HCA3359866.1"
                     /translation="MTQHTQTPSMPSPLWQYWRGLSGWNFYFLVKFGLLWAGYLNFHP
                     LLNLVFMAFLLMPIPKYRLHRLRHWIAIPVGFALFWHDTWLPGPQSIMSQGTQVAEFS
                     SGYLLDLIARFINWQMIGAIFVLLVAWLFLSQWIRVTVFVVAIMVWLNVLTLTGPVFT
                     LWPAGQPTDTVT"
     gene            complement(513..704)
                     /gene="bcsF"
                     /locus_tag="MOX77_004492"
     CDS             complement(513..704)
                     /gene="bcsF"
                     /locus_tag="MOX77_004492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsF"
                     /protein_id="HCA3359867.1"
                     /translation="MMTISDIVQIILFCALIFFPLGYLARHSLRRISDTTRLLFAKPR
                     YVKPAGTLRRATKVKADKK"
     gene            complement(701..2272)
                     /gene="bcsE"
                     /locus_tag="MOX77_004493"
     CDS             complement(701..2272)
                     /gene="bcsE"
                     /locus_tag="MOX77_004493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsE"
                     /protein_id="HCA3359868.1"
                     /translation="MRDTVDPVFSLGISSLWDELRHMPTGGVWWVNADRQQDAISLVN
                     QTIASQTENANVAVIGMEGDPGKVIKLDESHGPEKIRLFTMPDSEKGLYSLPHDLLCS
                     VNPTHYFFILICANNTWRNITSESLHKWLEKMNKWTRFHHCSLLVITPCNNSDKQSSL
                     LMGEYRSLFGLASLRFQGDQHLFDIAFWCNEKGVSARQQLLLCQQDERWTLSHQEETA
                     IQPRSDEKRILSHVAVLEGAPPLSEHWTLFDNNEALFNDARTAQAATIIFSLTQNNQI
                     EPLARRIHTLRRQRGSALKIVVRENIASLRATDERLLLGCGANMIIPWNAPLSRCLTL
                     IESVQGQQFSRYVPEDITTLLSMTQPLKLRGFQPWDTFCDAIHTMMSNTLLPADGKGV
                     LVALRPVPGIRVEQALTLCRPSRTGDIMTIGGNRLVLFLSFCRVNDLDTALNHIFPLP
                     TGDIFSNRMVWFEDKQISAELVQMRLLSPELWGTPLPLAKRADPVINAEHDGRIWRRI
                     PEPLRLLDDTAERAS"
     gene            2517..2720
                     /locus_tag="MOX77_004494"
     CDS             2517..2720
                     /locus_tag="MOX77_004494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhjR family protein"
                     /protein_id="HCA3359869.1"
                     /translation="MYNNEPGAQSDPTLGYTFQNDFLALSQAFSLPEIDYTDISQREQ
                     LAAAIKRWPLLAEFAQPHSLRKP"
     gene            2721..3473
                     /gene="bcsQ"
                     /locus_tag="MOX77_004495"
     CDS             2721..3473
                     /gene="bcsQ"
                     /locus_tag="MOX77_004495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsQ"
                     /protein_id="HCA3359870.1"
                     /translation="MAILGLQGVRGGVGTTSLTAALAWALQILGENVLVIDASPDNLL
                     RMSFNVDFVHQGGWARSLLDGQDWRDAGLRYTSQLDLLPFGQLTSQEWENPQAWQETL
                     GEIGSAIQALKASGRYSWILLDLPYGESPLTRQLVSLCDHTLAIAQVDANCHIRLHQQ
                     ALPAGAHILINDLRIGSQLQDDLYQVWLQSQRRLLPIVIHRDEAMAECMASKQPLGEY
                     RSDSLAAEEVLTLANWCLLHDAGDKTSAGSLR"
BASE COUNT          867 a          892 c          958 g          789 t
ORIGIN      
        1 cgtcaccgta tcggttggct ggcctgccgg ccacagcgta aaaaccgggc cggttaatgt
       61 caggacattc agccatacca tgatggcgac cacaaacacc gtaacccgaa tccactgtga
      121 taaaaatagc caggcaacca gcagtacgaa gatggcgccg atcatttgcc agttaataaa
      181 acgggcgatc agatcgagca gataaccgga gctgaattcc gccacctgcg tcccctggct
      241 cataatgctt tgcgggccgg gcagccaggt atcatgccag aacagcgcga agccgacggg
      301 aatggcaatc cagtggcgca accggtgaag gcgatatttt ggtattggca tgagcagaaa
      361 cgccatgaat accagattca gtaaaggatg aaaattcaga tagcctgccc acagcaggcc
      421 aaacttgacc agaaaataga agttccagcc ggaaagaccg cgccagtatt gccagagcgg
      481 agaaggcatt gaaggagttt gagtatgctg agtcattttt tgtctgcctt gactttcgta
      541 gcgcggcgca gagttccggc tggttttaca taacgaggtt tggcaaatag cagccgggtc
      601 gtatcactga tacggcgtag cgaatgacgc gccagatacc ccagcggaaa gaaaatcagc
      661 gcgcaaaaaa gaataatttg cacgatatcg ctgatggtca tcatgatgca cgctccgcgg
      721 tgtcgtcgag caatcgcagg ggttcaggaa tacgacgcca gatgcggcca tcgtgttcgg
      781 catttattac cgggtcggcg cgttttgcca gcggtagcgg cgttccccac agttccggcg
      841 acaataagcg catctgcacc agctcggcgc tgatttgttt atcttcgaac cagaccatac
      901 gattagagaa aatatcgcct gtcggcaaag ggaaaatatg gtttaacgcg gtatccagat
      961 cgttgacccg gcagaatgat aaaaacagca ccagacggtt gccgccgatg gtcataatat
     1021 cgccggttcg gcttggtcga cataatgtta acgcctgctc aacccgaatg cccggcaccg
     1081 ggcgcagcgc gaccagaacg cctttcccgt cggcggggag cagggtgttg ctcatcatcg
     1141 tatggatggc atcgcaaaag gtatcccacg gctgaaaacc gcgcagtttc aacggttgcg
     1201 tcatcgacag tagcgtggtg atgtcttccg gtacgtaacg gctgaactgc tgcccctgca
     1261 cgctttcaat aagcgtcaga cagcgtgaaa gcggggcgtt ccagggaatg atcatattcg
     1321 cgccgcagcc cagcagcagg cgctcatcgg tggcgcgcaa actggcgata ttttcgcgca
     1381 cgacaatttt cagcgcgctt ccccgctggc gtcgcaaagt atgaatgcga cgagcaagcg
     1441 gttcgatttg gttgttctgt gtaagcgaaa aaataattgt cgcggcctgc gccgtgcgcg
     1501 cgtcgttgaa tagcgcttcg ttattgtcga aaagcgtcca gtgttccgag agcggcggcg
     1561 cgccttcaag gacggcgacg tggctaagaa tgcgtttttc gtcgctacgc ggctgaattg
     1621 ccgtctcctc ctgatgggat agcgtccagc gttcgtcctg ctgacatagc aataactgct
     1681 gtcgggcgct gacgcctttt tcgttacacc agaaggcaat atcgaacaaa tgttggtcgc
     1741 cctgaaaacg taaactggcg aggccgaaaa gtgagcgata ctcgcccatc aacaacgagg
     1801 actgtttatc actattatta caaggggtaa taaccaacaa tgaacagtga tgaaaacgag
     1861 tccatttatt cattttttcc agccatttat gcaggctttc tgacgttata ttccgccacg
     1921 tgttatttgc acaaataaga atgaaaaagt aatgcgtcgg gttaacagaa caaagcaaat
     1981 cgtggggcaa agagtatagc cctttttctg aatccggcat ggtaaataag cggattttct
     2041 ccggaccgtg agattcatct aatttgatta ctttgccagg atcgccttcc atgccgatga
     2101 cggcgacatt tgcattctcc gtttgtgacg caatcgtttg attcaccagg ctgatggcat
     2161 cttgctggcg atcggcgtta acccaccaga cgccgccggt tggcatatgg cgcagttcat
     2221 cccataatga tgagatgccg agagaaaata cggggtccac agtgtccctc atgtcactat
     2281 tttaactgtt tatcagttta ctagcgaaag cacagaaata aacctaacat tgaaattaaa
     2341 acgcatcaga tttagcatgt gaatcaattt gtccggcagg atgccctgta actctgcgct
     2401 ttgcattttt acacattata aatgatgtca cggaaagatg aaaaatgcgc gttctcccgt
     2461 attgacgacg gggcgtaatg ctgccagtga gaaatattta aaaaggagca accagaatgt
     2521 ataacaatga acctggcgct cagtccgatc caacgttggg ctacactttt caaaatgatt
     2581 ttctggcatt aagccaggcg ttttcactac ccgaaataga ttataccgat atttcccaac
     2641 gcgaacagtt ggcggcggcg attaaaagat ggccgctcct ggctgaattt gcgcaaccac
     2701 attcattaag gaagccatga atggcgattc tgggactgca gggcgtgcgc ggcggggtgg
     2761 gaaccacatc tctcaccgca gcactcgcct gggcgttaca aatcttaggg gaaaatgtcc
     2821 tggtgattga cgccagcccc gataacctgc tgcgcatgtc gtttaacgtc gacttcgtcc
     2881 atcagggcgg ttgggcgcga tcgttgctgg acggccagga ctggcgcgat gccgggttac
     2941 gttatacctc gcagcttgat ctactgccgt ttggacagct cacctcgcaa gaatgggaaa
     3001 atccgcaggc ctggcaggag acgctgggag agatcggatc ggctatccag gcgctgaaag
     3061 cgagcgggcg ttatagctgg attttactgg acttgcccta cggcgagtca ccgctgacac
     3121 gacagctggt gagcctctgc gaccatacgc tggcgatagc ccaggttgac gctaactgcc
     3181 atattcgcct tcatcagcag gcgttgcctg ccggagcgca tattctgatc aatgacttac
     3241 gcattggcag tcagttacag gacgatctgt accaggtctg gctgcaaagc cagcgccggt
     3301 tgctgcctat tgtgatccat cgcgatgaag cgatggcgga gtgcatggcg tcgaaacagc
     3361 cgttaggcga gtatcgcagc gattcgttag ccgccgaaga ggtgttaacg ctggcgaact
     3421 ggtgcctgct gcacgatgcg ggcgacaaaa cgtctgccgg gagcctgcga tgagcgccct
     3481 ttcccggtgg ctgcttatcc cgccgg
//
LOCUS       DAGWFR010000279         3418 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.282, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000279 DAGWFR010000000
VERSION     DAGWFR010000279.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 3418)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3418)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3418
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.282"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..336
                     /locus_tag="MOX77_004496"
     CDS             <1..336
                     /locus_tag="MOX77_004496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TOBE-like domain-containing protein"
                     /protein_id="HCA3359871.1"
                     /translation="VGAHRWPLGYTPAYQGPVDLFLRPWEVDISRRTSLDSPLPVQVI
                     EASPKGHYTQLVVQPLGWYHDPLTVVMAGDDVPQRGERLFVGLQNARLYHGDQRIEPH
                     EALALAESA"
     gene            457..1368
                     /gene="cysM"
                     /locus_tag="MOX77_004497"
     CDS             457..1368
                     /gene="cysM"
                     /locus_tag="MOX77_004497"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase CysM"
                     /protein_id="HCA3359872.1"
                     /translation="MNTLEQTIGNTPLVKLQRLGPDNGSEIWVKLEGNNPAGSVKDRA
                     ALSMIVEAEKRGEIKPGDALIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAA
                     MRAYGAELILVTKEQGMEGARDLALAMSERGEGKLLDQFNNPDNPYAHYTTTGPEIWR
                     QTSGRITHFVSSMGTTGTITGVSRFLREQEKTVTIVGLQPEEGSSIPGIRRWPTEYMP
                     GIFNASLVDEVLDIHQNDAENTMRELAVREGIFCGVSSGGAVAGALRVARATPGAIVV
                     AIICDRGDRYLSTGVFGEEHFSQGAGI"
     gene            complement(1401..1778)
                     /locus_tag="MOX77_004498"
     CDS             complement(1401..1778)
                     /locus_tag="MOX77_004498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000710726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfeK family protein"
                     /protein_id="HCA3359873.1"
                     /translation="MKKDFTMKKIVCAVVALLLTLPAWAKLNAHEEARINAMLNVLAQ
                     KKDLTFVRNGDAHNCEEAVSHLRLKLGNTRNRIDTAEQFIDKVASSSSITGKPYIVKI
                     PGKSDENAQPYLHALIAETDKTL"
     gene            complement(1837..2556)
                     /locus_tag="MOX77_004499"
     CDS             complement(1837..2556)
                     /locus_tag="MOX77_004499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GMP synthase"
                     /protein_id="HCA3359874.1"
                     /translation="MRVHFVIHESFESAGAYLKWAEDRGYTISWSRVYAGEALPPNAD
                     EFDMLVVFGGPQSPRTTREECPYFDSQAEQHLINQAISARKIVVGICLGSQLIGEALG
                     AKVCQSPEKEIGHYPIVLTEAGQQHPLFNHFGSPLIVGHWHNDMPGLTDQAIILATSE
                     GCPRQIVQYGNFVYGFQCHMEFTVEAVEGLIQHSQQELADAQGKRFIRSVAEMRAWNY
                     QQMNEKLWRFLDELTLAHSQK"
     gene            complement(2571..>3418)
                     /locus_tag="MOX77_004500"
     CDS             complement(2571..>3418)
                     /locus_tag="MOX77_004500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HCA3359875.1"
                     /translation="AIDAIERLLCAHLLPGDSVAVEDPCFLSSINMLRYAGFSASPVS
                     VDSEGMQPEKLEQALNQGARAVILTPRAHNPTGCSLSARRAAALQNILARYPQVLVII
                     DDHFALLSSSPWQPVIAQTTQHWAVIRSVSKALGPDLRLAIVASDSSTSAKLRLRLNA
                     GSQWVSHLLQDLVYACLTDPEYQHRLAQTRLFYATRQQKLARALQQYGIAISPGDGVN
                     AWLPLDTHSQATAFTLAKSGWLVREGEAFGVSAPSHGLRITLSTLNDGEINTLAADIH
                     QALNR"
BASE COUNT          741 a          913 c         1006 g          758 t
ORIGIN      
        1 gttggcgcgc atcgctggcc gctgggttat acgcccgcgt accaagggcc ggtcgatctg
       61 ttcctgcgtc cgtgggaggt ggatatcagc cgccgcacca gcctggattc tccgctacca
      121 gtacaggtca ttgaggcaag cccgaaaggt cactatacac agttagtggt acagccgctg
      181 gggtggtatc acgatccgct gacggtggtg atggcgggtg acgacgtccc gcagcgcggc
      241 gagcgtttgt ttgtcggctt acagaacgca cgtctctatc atggcgacca gcgtattgag
      301 ccccatgagg cgcttgctct tgcggagtct gcctgatagg ttaatttgca tagttatcgc
      361 ccggtggcgc ttcgcttacc gggcctacag cgtatatcgt gattttgtag gccgggtaag
      421 cacagcgcca cccggcattt ttattgagct gaaaacgtga atacattaga acaaaccatc
      481 ggcaatacgc cgctggtcaa attacaacgg ctggggccgg ataacggcag tgaaatctgg
      541 gtcaagctgg aaggcaataa tccggcagga tcggtgaaag atcgcgcggc gctatcgatg
      601 attgtcgagg cggaaaagcg cggggaaatt aaaccgggcg atgccctgat tgaagcgacc
      661 agcggcaaca ctggcattgc gctggcgatg atcgccgcgc tgaaaggtta tcgcatgaag
      721 ctgttgatgc cggacaacat gagccaggag cgtcgggcgg caatgcgggc ctatggcgcg
      781 gaactgattc tggtcactaa agagcaggga atggaagggg cgcgcgattt agcgctcgct
      841 atgtctgagc gcggagaagg taaactgctc gatcagttta ataatcctga taatccctac
      901 gcccactaca cgaccaccgg cccggaaatc tggcggcaaa cgtcaggtcg catcacccat
      961 tttgtctcca gcatgggcac gaccggcacc attaccggcg tgtcgcgttt tctgcgcgag
     1021 caggaaaaaa cggtcaccat cgttggcctg caaccggaag agggcagcag tattccgggc
     1081 attcgccgct ggcctacgga atatatgccg ggcatattta acgcctcgct ggtggatgag
     1141 gtgctggata ttcatcagaa tgatgccgaa aacaccatgc gtgaactggc ggttcgtgaa
     1201 gggattttct gcggcgtcag ctccggcggc gcggtagcgg gcgcgttacg cgtcgcacga
     1261 gccacgcccg gcgcgatagt ggtggcgatc atctgcgatc gcggcgaccg ttacttgtct
     1321 accggcgtgt ttggtgaaga gcatttcagc cagggggcag ggatttaaac gaggtgccat
     1381 cgtcgtatga cacccgtgtg ttatagcgtt ttatccgttt ccgcaataag tgcatgtaaa
     1441 taaggctgcg cgttttcatc gcttttacca ggaattttaa cgatataggg ttttccggtg
     1501 atggacgacg acgacgcgac tttatcgata aactgttcag cggtgtcgat acgattgcgc
     1561 gtgttaccca gttttaagcg caggtgcgat acggcttcct cgcagttatg cgcatcaccg
     1621 ttacgaacga aggtcagatc ctttttctgc gccagcacat taagcatggc gttaatgcgc
     1681 gcttcttcat gggcgtttag cttcgcccag gcggggaggg tcagcaggag cgcgacgacg
     1741 gcgcagacaa ttttcttcat ggtaaaatcc tttttcatgc aataatcact gcacctcaga
     1801 ccgttagccg ggtaataagt tgcactcctg gtgtggttat ttctgtgagt gcgccagcgt
     1861 gagttcatcc agaaaacgcc acagcttttc attcatctgc tgataattcc atgcgcgcat
     1921 ctcggcgacc gagcggataa aacgcttccc ttgcgcgtcg gccagctcct gctgcgaatg
     1981 ttggattaat ccttcaaccg cctcgacggt aaattccata tgacactgga agccgtagac
     2041 aaaattgccg tactgcacga tttgtcgcgg gcagccctca ctggtagcaa gaattatcgc
     2101 ctggtcggtt aaccccggca tgtcgttatg ccagtgaccg acgataagcg gggagccgaa
     2161 atggttgaac agcgggtgct gttggcctgc ctcggtcagg acgattgggt agtgaccgat
     2221 ctctttttcc ggactttggc acaccttggc gcccagcgct tcgccaatta actgcgagcc
     2281 caaacagatc cccaccacga tttttcgtgc cgaaatcgcc tggttaatca gatgttgctc
     2341 ggcctgagaa tcaaagtacg ggcactcttc gcgggtggtg cgcggcgact gcggaccgcc
     2401 aaataccacg agcatatcga actcatctgc attgggcggt agcgcttctc cggcatagac
     2461 gcgcgaccat gaaatggtat aaccgcgatc ttcagcccat ttcagataag cgccagcgga
     2521 ttcaaacgac tcatggataa caaaatgaac tcgcacgtta ttttctcctg ttagcgattt
     2581 agcgcctgat ggatatcagc cgccagcgtg ttgatctcgc cgtcatttaa tgtcgacagc
     2641 gtgatacgta gaccgtgaga cggcgcgctt acgccaaagg cttcgccctc acgtaccagc
     2701 cagccggatt ttgccagcgt aaacgcggta gcctggctat gggtgtccag cgggagccag
     2761 gcattcacgc cgtcgccggg agaaatggcg atgccatatt gctgtagggc gcgggccagt
     2821 ttttgttgcc gggtggcgta aaacagccgc gtttgcgcca gcctgtgctg atactcaggg
     2881 tcggtcaggc aggcgtagac cagatcctgt aacagatggc tgacccactg actaccggca
     2941 tttagccgca gccgaagttt tgccgaggtc gagctgtcgc tggcgacaat agcaagacgt
     3001 aaatcggggc cgagggcttt ggaaacggag cgtatcaccg cccagtgttg cgttgtctgc
     3061 gcaataaccg gctgccaggg cgacgaagaa agcagggcga agtgatcgtc gataatgacc
     3121 agtacctgag ggtaacgcgc cagtatattt tgcagcgcag cggcacggcg agcgctcagg
     3181 ctacagccgg tagggttgtg tgcgcgcggc gttaagatca ctgcccgcgc gccctggttt
     3241 agcgcctgct ccagcttttc aggctgcatt ccttcgctat ccacactgac cgggctggcg
     3301 ctaaaaccgg catagcgcag catattgata ctgcttaaaa aacagggatc ttccaccgca
     3361 acgctgtcgc ccggcagcag atgcgcgcaa agcagtcttt cgatagcgtc gatagctc
//
LOCUS       DAGWFR010000280         3388 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.283, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000280 DAGWFR010000000
VERSION     DAGWFR010000280.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 3388)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3388)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3388
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.283"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            1..3158
                     /locus_tag="MOX77_004501"
                     /pseudo
     CDS             1..3158
                     /locus_tag="MOX77_004501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461449.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
     gene            3159..3260
                     /locus_tag="MOX77_004502"
                     /pseudo
     CDS             3159..3260
                     /locus_tag="MOX77_004502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477181.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
BASE COUNT          847 a          928 c          963 g          650 t
ORIGIN      
        1 gccaggacag cggcgcgggc tttaaaacgc cgctgacggc ggtgatagag cacaacggcg
       61 taacgagcgc gctgctaccg gtcattttta ccgtcgtcac cagcccggac acgccgaaag
      121 ccaactactg gggccatatg gcggaaacgc tgaccgacag cagcggcgtg gtgtacaagc
      181 gcccgttgct ggccagcgag ttcagcgtca cgcccggcaa atcgctgacc atcgccaacg
      241 gttactacga caaaggcgaa acctggggca tgataaccgt cgataaagcc tagaacggcg
      301 ccggcggcgg ctgcgggcgc aattatctgc ccaccgtcag caacctccag acgctgtaca
      361 gtacctggcc tgataacgcc atgcgcagtt gtaacggctg gccgatgacc agttctggca
      421 acaataacgt cagccgctac tggtgggcgg gggattacgt gatgtcgtca gacggcgcgc
      481 agtcgctcta cgcggcggtc aacctgttta acgacggcaa tgatgtcaaa acgacgacca
      541 gcaccacgac gtactatatg cagacctgcc ttacctcgcc acgcagcgcc gccgccagcc
      601 tgacgctgac gctggcaggc caggatgcag ccaccgggat cgcaaaagcg aaaaagggcg
      661 agcagatggc cgccaccgtc acggtgaaag acgccgcagg tcagccgatg aaaaacgtga
      721 tggtgaaaat cagccgggga tcttcgtaca accgcgtcaa cagcgccaca tcgtcctcaa
      781 gcgctgcaga cgatattacg ctgcgtaatg tgatgccgtc cggcccggcg acatacctgc
      841 tggatacctc cgcgaaatat ctgtatgcgc aaaccgatgc ccagggacag gtgacattta
      901 cccttgcgca ggacagtacc gcaggtttaa agaccaccat cagcgccgcc acgatggacg
      961 gcagcaacct gacagacagc aaagacgcta tctttaccgt tatcaccagc ccggatagcg
     1021 acaaggcctc atactggggc catatgccgg aaacctttac caacagtaag ggcgttgagt
     1081 ttgcgcggcc gctgctgcgc gccgagcttt cttcaacgac ggataccacg tccttcctgt
     1141 caaataatga gcactggtac acctggaacc gctatccaaa cctgtatcag gactccgcca
     1201 gcccgtgcga tcggctggga ttgccgacgc tggatgattt aaaaacgttg tataacgact
     1261 atccgaatgg tggactaacg gccgcctttg ggttgcctgt agacgcgggg aaatactggg
     1321 gagcagggga ttcgaaagtc aacgatacgc actcgacgaa taatttccag tatatcaggc
     1381 taaataacgg cgttacgcag gtcacaaata cgaatacctc aacggcgcag ctctgtctgg
     1441 cgaagcgcag ggtgttggcg atagcgttga cctccagcgc catgaatgcc gaaaaatccg
     1501 ccgcgctggc gaaaaaaggg gataaaatcc cgctgacggt gaccgtcacg gacggcgccg
     1561 gcacgccgta gcccaatgtg cccattcggc tggggcgagg aaactattcg caaaaccggg
     1621 ctggcggtag tgacagcacc aacaacagcg acatgctgtt aacgccgatt gcgccgccag
     1681 cggatgctaa agtatttgcc taccattatt ccggggagca gctctggtac tggtacggca
     1741 ctacggatga gagcggcagg gtgcagtttg agctgacgca ggataatacc cccggcctga
     1801 aaacagcgct gcaggcgatg ctgtccgaca atccgccgac cgtcagcaat atggatgtca
     1861 tttttaccgt cattaccagc ccggacagcg ataaagccaa aatgtggggc catatgccgg
     1921 aaacggcggc caacagcgcg ggggtgaaat tccaccgccc gctgctggct gcggagatga
     1981 cgtcgaatag cggcacctac tattacaata acgaaacatg gcctctggtg actatcgcga
     2041 acacccagaa agcgggcgcg accacctgtg atgctgcata tcagccgttg tttaatgacc
     2101 tgcaaacgct gtatagcgac catccagaca gcgctctcaa tacggcattc ggctggccgg
     2161 taggggcggg taaaagctgg ctggcggtgg accaggagcc tggaaccggg tattaccagt
     2221 atctgcggct ggataccggc gccaaaggcc acaccagttc cacgagcgtg tctggcgcgc
     2281 aggtgtgtct ggtcgagccg catacgtcta ctcctgccaa tattacgctg acctcgacgg
     2341 cgatggacag cgcgaaaaac gcggcggtag tggagaaggg aagcgcgatg ccgttaacgg
     2401 tgacggtaaa agatagcagc ggtaacccgg tcgccaacgt cggttttacg ttgtcacgtg
     2461 gcgattcgaa aaatcgggca ggtacggtgg taacggatgg cgacgtggca gcggatgccg
     2521 gagcagatga tctcatgctt aaagagctga ctcccgcaag cgccagccga agtatgacca
     2581 ccaccgggat tgtctttacc ggcactaccg gcagcgacgg tacggcaacg tttacgctta
     2641 atcaggataa aagtctgggg ttaaaaacgc cactcacggt gaaactgacg gacaatacgg
     2701 ctcttcacgc ctcactggat gtgattttta tggtacttac cagcccggat acggataaag
     2761 cgttgttctg gggaaatatg tcggatacga catccgtcaa cggaaaaacg ctgcatcgtc
     2821 cgtggctgca ggctgagcta ccgtcaggcg tgacgccagt atttaccaac ggagttcatg
     2881 caaataacga gtactgggcg atgacgcata cggtggacaa cactaaatgg gatattgcta
     2941 aacagtgcgg tagcctgagc aaagcaccgg ataataacga cctgttgacg ctgtatcatt
     3001 caattagctc gttaggctgg ccgacgctgg gctatcccta tttatctaaa tcaacctcgg
     3061 gcggcggcat gtattgcggc gtggatgaga atactaagca gcaaaactgc gccattcagc
     3121 cggcaagtac agcaggttat gcgacgtgcg tggagtaacg tattaagcgt ctggcacgaa
     3181 aaataatttg tttttcacgt tcaattgagc ttcatgaaaa agtgatcgga gcattcattg
     3241 aaaagtatat gttctgctaa ttggagtcat caccgtttgc cgctggtgtg tagatgcgcc
     3301 gtttcccttc tgtaacccgg tatctggcgc tacctatata caaaataaca ccaggtgtcg
     3361 catgataatc acacctttta tctcacgt
//
LOCUS       DAGWFR010000281         3386 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.284, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000281 DAGWFR010000000
VERSION     DAGWFR010000281.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 3386)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3386)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3386
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.284"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            231..1277
                     /gene="ansB"
                     /locus_tag="MOX77_004503"
     CDS             231..1277
                     /gene="ansB"
                     /locus_tag="MOX77_004503"
                     /EC_number="3.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-asparaginase 2"
                     /protein_id="HCA3359876.1"
                     /translation="MEFFRKTALAALVMGFSGAAFALPNITILATGGTIAGGGDSATK
                     SNYTAGKVGVENLVDAVPQLKDIAVVKGEQVVNIGSQDMNDEVWLTLAKKINTECDST
                     DGFVITHGTDTMEETAYFLDLTVKCNKPVVLVGAMRPSTSMSADGPFNLYNAVVTAAD
                     KQSANRGVLVVMNDTVMDGRDVTKTNTTDVATFKAVNYGPLGYIHNGKIDYQRTPERK
                     HTTSTPFDVSKLTALPKVGIVYNYANASDLPAKALVDAGYDGIVSAGVGNGNLYKTVF
                     DTLATAAHNGTVVVRSSRVPTGATTQDAEVDDAKYGFVASGTLNPQKARVLLQLALTQ
                     TKDPKQIQTMFNQY"
     gene            1410..2417
                     /locus_tag="MOX77_004504"
     CDS             1410..2417
                     /locus_tag="MOX77_004504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1202 domain-containing protein"
                     /protein_id="HCA3359877.1"
                     /translation="MVRQWIAGAALFALISGYSWAEVAQPSDNILKEQFSKQYHGILK
                     LDSITLKNLDSTGNQATWSAEGDISSREDMYTGVGMAADYYFVEKTWTKDRPVKFSAM
                     LTSKGTPASGWTVSYYSLQMAASDQGRAIDDIKTNDKYLIVNSDDFNYRFGNIEASWR
                     AQKASIPGLEEQLSALDKKIAVAKKEADAYWGKGADGKPLTRAEAFKKTLKERDDYVK
                     ANDSSVYAEKYEKEVYQPALDACRKQSEPCNEAAIQQKRDLDIHEQRRQVFLKSEELR
                     RKAQNDWITLEKGQYPLNIAVQKLQMQQSDIRMKIMDINDGYERWKKDTDDLRRKGVI
                     K"
     gene            complement(2508..>3386)
                     /gene="hemW"
                     /locus_tag="MOX77_004505"
     CDS             complement(2508..>3386)
                     /gene="hemW"
                     /locus_tag="MOX77_004505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM family heme chaperone HemW"
                     /protein_id="HCA3359878.1"
                     /translation="RLNLAADAEITMEANPGTVEADRFIDYQRAGVNRISIGVQSFSE
                     PKLKRLGRIHGPQEAMRAARLANGLGLRSFNLDLMHGLPDQTLEEALNDLRQAIALNP
                     PHLSWYQLTIEPNTLFGSRPPVLPDDDALWDIFEQGHQLLTAAGYQQYETSAYAKPGY
                     QCQHNLNYWRFGDYLGIGCGAHGKVTFPDGRILRTTKTRHPRGYMQGRYLESQRDVSD
                     DDKPFEFFMNRFRLLERAPRAEFVDYTGLTEAVIRQPIDEAIAQGYLTECEQYWQITR
                     HGKLFLNSLLELFLAE"
BASE COUNT          895 a          820 c          893 g          778 t
ORIGIN      
        1 cttaaagcta aaagctttcc ggaaccccca gcctagctgg gggttttcca tagacaacaa
       61 tggcgcagat cgtatctgcg cctttttatt ctgttttttc ctgcattttg ttatccatct
      121 ctaaaaaata ctctctgtcg gatatatatc gctggttaat cgtatggcgt cacattattc
      181 gtctgcaata tagggataat gcgaccagtt gacataactg gagatataac atggagtttt
      241 tcaggaaaac ggcattagct gctctggtaa tgggtttcag cggcgcagcg ttcgctttac
      301 cgaatatcac catcttagcg accggcggaa cgatcgctgg cggcggtgat tcagcaacaa
      361 aatcaaatta tacggcaggt aaagtcggcg tcgaaaatct ggtggatgcc gttcctcaat
      421 tgaaggacat tgcggtagtg aaaggcgagc aggtcgttaa cattggctcg caggatatga
      481 acgatgaagt ctggctcacg ctggcgaaaa aaatcaatac cgagtgcgac agcaccgacg
      541 gtttcgtgat cacccacggt actgatacga tggaagagac cgcttatttc ctcgatctga
      601 ccgtgaaatg caataaaccg gtggtactgg tcggcgcgat gcgtccttcc acgtcaatga
      661 gcgcagatgg cccgttcaac ctctataatg cggtagtaac agcggctgat aaacagtctg
      721 ccaaccgcgg cgtgctggtg gtaatgaatg ataccgtcat ggacggacgc gacgtcacta
      781 agaccaatac gactgacgtg gcgacgttta aagcggttaa ctacggcccg ctgggttata
      841 tccacaacgg taaaattgac taccagcgta cgccagagcg taaacatacc acctccaccc
      901 cgttcgacgt gtcgaagctg accgcgttgc cgaaagtcgg tatcgtttat aactatgcga
      961 atgcgtccga tctgccggca aaagcgctgg tagacgcggg ttatgacggg atcgtgagcg
     1021 caggcgtggg taacggcaac ctgtataaaa cggtctttga taccctagcg accgccgcgc
     1081 acaacggtac ggtagtggtg cgttcttcac gtgtgccgac tggcgcaacc acgcaggatg
     1141 cggaagttga cgatgcaaaa tacggctttg tcgcttccgg cacgctgaac ccgcaaaaag
     1201 cgcgtgtctt actgcaactg gcgttaaccc agactaaaga tccaaaacag atccagacga
     1261 tgttcaatca gtattaaaga taatgccccg gtcggaaggc cggggccatc tttggaagac
     1321 ctctcgcaca accaacacta ttatcttgct aattatcatc ctggttatga taattgtggg
     1381 cgtcatgtct ctggacggga ggtccacaag tggttcgaca atggattgct ggcgcagcgc
     1441 tgtttgccct gatttcaggc tatagttggg cagaggttgc tcaaccctcc gataacatct
     1501 taaaagaaca gtttagtaag cagtaccacg gcatacttaa actggattcc attaccttaa
     1561 aaaatcttga ttcgacgggc aatcaggcca cctggtctgc cgaaggggat atttcttccc
     1621 gtgaagatat gtataccggc gttggtatgg cggcggatta ttattttgtt gaaaaaacct
     1681 ggaccaaaga tcgtcccgtt aaattttctg ccatgttaac cagcaaaggg acgccagcct
     1741 ctggctggac ggtgagctat tactcattac aaatggcagc cagcgatcag ggccgggcta
     1801 ttgacgacat taaaacgaat gataaatacc tgatcgtcaa cagtgatgac tttaactatc
     1861 ggtttggcaa cattgaagcc tcctggcgtg cgcagaaagc gtcgatcccc ggtcttgaag
     1921 aacaactctc tgccctggat aagaaaatag cggtagctaa aaaagaagcg gacgcatatt
     1981 ggggaaaagg cgctgatggg aaaccgttga cccgcgccga ggcgtttaaa aagacgttaa
     2041 aagagcgcga tgattatgta aaagccaacg atagcagcgt atatgccgag aaatacgaaa
     2101 aagaggtcta tcaaccagca ttagacgcgt gtcgtaagca gagtgagccg tgcaatgaag
     2161 cggctattca gcagaaaaga gatttagaca tacacgagca acggcggcag gtatttttga
     2221 aatcagaaga gctgcgtcga aaagcgcaga atgactggat aacgttagag aaagggcaat
     2281 atccgctgaa tatagcggta cagaaacttc agatgcaaca gagtgatatc cgcatgaaaa
     2341 tcatggatat taatgacggt tacgagcgct ggaaaaaaga tacggacgat ttgcgtcgta
     2401 aaggcgttat taaataatgc gcttgctggt ggcgcattaa ccgccacagg tcggtaagcg
     2461 tcgcgccatc aggtatttta cccgctggcg cgacaggctt atccttgtta ttccgcgaga
     2521 aacaactcaa gaagagagtt taaaaacagt ttaccgtgac gggtaatctg ccagtattgc
     2581 tcgcattctg tcaggtagcc ctgggcaata gcctcgtcga ttggctgacg aataaccgct
     2641 tccgtaagcc cggtgtagtc gacaaattcg gcgcgaggcg cgcgctccag caaccgaaaa
     2701 cggttcataa agaactcaaa gggtttatcg tcatcactca cgtcacgctg gctttccagg
     2761 taacgtccct gcatataacc gcgtgggtga cgggttttgg tggtgcgcaa gatcctgccg
     2821 tccgggaagg tgactttacc gtgggcgccg cagccaatac ccagatagtc gccaaagcgc
     2881 cagtagttca gattatgctg gcactgataa ccgggtttgg cataggccga cgtttcgtat
     2941 tgctgatagc ccgcggcggt taataactgg tggccctgct caaagatatc ccacagcgcg
     3001 tcatcgtccg gtaaaaccgg cggacgcgaa ccgaacaaag tgttgggttc aatcgtcaat
     3061 tgataccatg agagatgcgg cggattaagc gcaatcgcct gtcgcaaatc attcagcgcc
     3121 tcttccagcg tttgatccgg caatccatgc atcaagtcga ggttaaagct gcgtagccca
     3181 agcccatttg ccagtcttgc tgcccgcatc gcctcttgtg gaccgtgaat acggccaaga
     3241 cgtttcagct taggctcact aaagctctgc acgccaatgg agatccggtt tacgccggcg
     3301 cgctgatagt cgatgaagcg gtcggcttcg accgtgccgg ggttcgcttc catggtaatt
     3361 tccgcatccg ccgccagatt caggcg
//
LOCUS       DAGWFR010000282         3349 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.285, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000282 DAGWFR010000000
VERSION     DAGWFR010000282.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 3349)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3349)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3349
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.285"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..1617
                     /gene="ftsK"
                     /locus_tag="MOX77_004506"
     CDS             <1..1617
                     /gene="ftsK"
                     /locus_tag="MOX77_004506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HCA3359879.1"
                     /translation="QYQQPQQPVAPQPQYQQPQQPTAPQDSLIHPLLMRNGDSRPLQR
                     PTTPLPSLDLLTPPPSEVEPVDTFALEQMARLVEARLADFRIKADVVNYSPGPVITRF
                     ELNLAPGVKAARISNLSRDLARSLSTVAVRVVEVIPGKPYVGLELPNKKRQTVYLREV
                     LDNAKFRENPSPLTVVLGKDIAGDPVVADLAKMPHLLVAGTTGSGKSVGVNAMILSML
                     YKAQPEDVRFIMIDPKMLELSVYEGIPHLLTEVVTDMKDAANALRWSVNEMERRYKLM
                     SALGVRNLAGYNEKIAEAARMGRPIPDPYWKPGDSMDVQHPVLEKLPYIVVLVDEFAD
                     LMMTVGKKVEELIARLAQKARAAGIHLVLATQRPSVDVITGLIKANIPTRIAFTVSSK
                     IDSRTILDQGGAESLLGMGDMLYSGPNSTMPVRVHGAFVRDQEVHAVVQDWKARGRPQ
                     YVDGITSDSESEGGGGGFDGGEELDALFDQAVNFVTQKRKASISGVQRQFRIGYNRAA
                     RIIEQMEAQGIVSAQGHNGNREVLAPPPFE"
     gene            1762..2373
                     /gene="lolA"
                     /locus_tag="MOX77_004507"
     CDS             1762..2373
                     /gene="lolA"
                     /locus_tag="MOX77_004507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010354356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein chaperone LolA"
                     /protein_id="HCA3359880.1"
                     /translation="MKKMAIACALLSSVVASSVWADAASSLKSRLDKVSSFHATFTQK
                     VTDGSGAAVQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWL
                     KDATGNTPFMLIARNQASDWQQYNIKQDGDNFVLTPKASNGNLKQFTINVGRDGTIHQ
                     FSAVEQDDQRSAYQLKSQQNGAVEPSKFTFTPPQGVTIDDQRK"
     gene            2383..>3349
                     /gene="rarA"
                     /locus_tag="MOX77_004508"
                     /gene_synonym="mgsA"
     CDS             2383..>3349
                     /gene="rarA"
                     /locus_tag="MOX77_004508"
                     /gene_synonym="mgsA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein
                     RarA"
                     /protein_id="HCA3359881.1"
                     /translation="MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRA
                     IEAGHLHSMILWGPPGTGKTTLAEVIARYASADVERISAVTSGVKEIREAIERARQNR
                     NAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVY
                     LLKSLTTDDIEQVLDQAMQDKTRGYGDQDIVLPDETRRAIAELVNGDARRALNTLEMM
                     ADMAEADDSGKRVLLPALLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALY
                     WYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFT"
BASE COUNT          774 a          862 c          965 g          748 t
ORIGIN      
        1 cagtatcagc agccgcaaca gccggtagcg cctcagccgc agtaccagca gccgcagcaa
       61 ccgacagcgc cgcaagacag tctgatccac ccgctgttga tgcgtaacgg cgacagtcgt
      121 ccattgcagc gtccgacgac gccgctgcct tcattagatc ttctgacgcc gccgccgagc
      181 gaagttgaac cggtagatac ctttgcgctg gaacaaatgg cgcgtctggt tgaagcgcgt
      241 ctggcggatt tccgcattaa agctgatgtg gtgaactatt cgccaggccc ggtcattact
      301 cgctttgaac tgaatctggc cccgggcgtt aaagcagcgc gtatctccaa cctttcccgg
      361 gatctggcgc gctccttgtc aacggtagcc gtacgcgttg tggaagtcat tccaggcaaa
      421 ccttacgtag ggttggaatt gccgaacaag aaacggcaaa ccgtttatct gcgcgaagtg
      481 ttggataacg ccaaattccg cgagaatccg tcgccgctta ccgtggtgtt aggtaaggat
      541 atcgcgggcg atccggtagt ggcggatctg gcgaaaatgc ctcacctgct ggtggccggt
      601 acgaccggtt ccggtaagtc ggtcggggtt aacgccatga tcctcagtat gctgtataaa
      661 gcgcagccgg aagacgttcg ctttatcatg atcgacccga aaatgttaga actctcggtc
      721 tatgaaggta taccgcatct gctgacggaa gttgttaccg atatgaaaga cgcagctaac
      781 gcgttacgct ggagcgtcaa tgagatggag cgtcgctata agctgatgtc cgcgctcggc
      841 gtgcgtaatc tggctggtta taacgagaaa atcgccgaag cggcccgcat gggacgtccg
      901 attccggacc cgtactggaa gccgggcgac agtatggatg ttcagcatcc ggttctggaa
      961 aaactgccgt atatcgtggt actggttgat gaatttgccg acctgatgat gaccgtcggt
     1021 aaaaaagttg aagagctgat cgcgcgtttg gcgcagaaag cgcgcgctgc ggggattcac
     1081 ctggtactgg cgacgcagcg tccgtcggtc gatgtgatta ctggtttaat taaagccaac
     1141 attccaaccc gtatcgcttt tacagtatcc agcaagatcg actcccgcac cattcttgat
     1201 cagggtggcg ctgagtcgtt attgggaatg ggggacatgc tctattccgg accaaactcc
     1261 accatgccgg tacgtgtcca tggggcgttt gtgcgtgacc aggaagtcca tgcggtggtg
     1321 caggactgga aagcgcgcgg tcgtccgcaa tatgtggatg gcattacctc cgacagcgaa
     1381 agcgaaggtg gcggtggcgg ttttgacggc ggcgaagaat tagatgcgct attcgatcag
     1441 gccgttaatt tcgtcactca gaagcgaaaa gcgtccattt ccggcgttca gcgtcagttc
     1501 cgtatcggct ataaccgtgc ggcgcgtatt atcgaacaga tggaagcgca gggtattgtc
     1561 agcgctcagg ggcataacgg taatcgcgaa gtgttggctc cgccgccttt tgagtaaacc
     1621 tgtaaaccgg atggcgctgt tcagaggctg ccatccggca acaaaattca gtattttctt
     1681 ctttcctcat gctgattttt ggcctggaat agaaagcaaa aggagctcct ggtcgggagt
     1741 gtcgaaactt gaggaataat gatgaaaaaa atggcaatcg cctgtgcatt actttcaagc
     1801 gttgtagcca gcagcgtatg ggctgacgcc gccagctctc tgaaaagccg tctggataaa
     1861 gtgagcagct ttcatgccac ctttactcaa aaagtcaccg atggcagcgg tgccgcggtg
     1921 caggagggac agggtgattt atgggttaag cggccaaatc tattcaactg gcatatgacg
     1981 caacctgacg agagtattct ggtttctgac ggcaaaacgt tatggttcta taacccgttt
     2041 gtagaacagg ctaccgccac gtggttgaaa gatgccaccg gaaatacacc gtttatgctg
     2101 attgcccgca accaggccag cgactggcag cagtataata ttaagcagga tggcgataat
     2161 tttgtgctga cgccgaaagc cagcaacggc aatctgaaac agttcaccat caatgtggga
     2221 cgcgacggga ctatccacca gtttagcgcc gtagaacaag acgatcagcg tagcgcctat
     2281 cagctaaaat cccagcaaaa cggcgctgtt gaaccgtcaa aatttacgtt tactccgccg
     2341 caaggggtaa cgatagacga ccaacgtaag tagaggcgat gagtgagcaa tctgtcgctc
     2401 gatttttctg ataatacgtt tcaaccgctg gccgcgcgaa tgcggccgga aaatttagca
     2461 cagtatatcg gccagcagca tttgctggcc gcaggtaagc cgttgcctcg cgctattgag
     2521 gccgggcatc tgcactccat gattttatgg gggccgccag ggacggggaa aaccacgctc
     2581 gctgaagtga tcgcccgcta cgccagcgcc gatgtcgagc gtatttccgc cgtcacttct
     2641 ggggtaaaag agattcgcga agctatcgag cgcgcccgcc agaatcgtaa tgccggtcgc
     2701 cgtaccatcc tgtttgtcga tgaagtgcat cgctttaaca aaagccagca ggacgccttt
     2761 ttaccgcata tcgaagatgg cactatcacc tttatcggcg cgaccacgga aaatccctct
     2821 tttgagctga actcggcgct attgtcgcga gcgcgagtct atctgctgaa atcgttgact
     2881 actgacgata ttgagcaagt actggaccag gcgatgcagg acaaaacgcg tggttacggc
     2941 gatcaggata tcgtgttacc ggatgagaca cggcgagcga ttgctgagct ggtcaatggc
     3001 gacgcgcggc gcgccttaaa tacgctggaa atgatggctg atatggcgga ggcggatgac
     3061 agcggcaaac gcgttttatt gcccgccttg ttgaccgaga tcgccggcga gcgcagcgcg
     3121 cgttttgata acaaaggcga tcgcttctac gatcttattt ccgccttaca taaatcagtg
     3181 cgcggcagcg cgccggatgc cgccctctat tggtatgccc gtatcattac cgcgggaggc
     3241 gatccgctgt acgtggcgcg tcgctgcctg gcgattgcct cggaagatgt gggtaatgcc
     3301 gatcctcgcg cgatgcaggt cgccattgcc gcgtgggatt gtttcaccc
//
LOCUS       DAGWFR010000283         3321 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.286, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000283 DAGWFR010000000
VERSION     DAGWFR010000283.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 3321)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3321)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3321
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.286"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..105
                     /locus_tag="MOX77_004509"
     CDS             <1..105
                     /locus_tag="MOX77_004509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HCA3359882.1"
                     /translation="QLDELLNAVDLTLKPEQIAELETPYKQHPVVGFK"
     gene            complement(209..724)
                     /gene="pgpA"
                     /locus_tag="MOX77_004510"
     CDS             complement(209..724)
                     /gene="pgpA"
                     /locus_tag="MOX77_004510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HCA3359883.1"
                     /translation="MTILPRHKDVAKSRLNLRNPWHLLATGFGSGLSPVVPGTMGSLA
                     AIPFWYLMTFLPWQLYSLVVMFGICIGVYLCHQTAKDMGVHDHGSIVWDEFIGMWITL
                     MALPTTDWQWVAAGFVIFRILDMWKPWPIRWFDRNVHGGMGIMIDDIVAGVISAGILY
                     FIGHHWPLGII"
     gene            complement(702..1679)
                     /gene="thiL"
                     /locus_tag="MOX77_004511"
     CDS             complement(702..1679)
                     /gene="thiL"
                     /locus_tag="MOX77_004511"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HCA3359884.1"
                     /translation="MACGEFSLIARYFDRVRSSRLDVETGIGDDCALLNIPEKQTLAI
                     STDTLVAGNHFLPDIDPADLAYKALAVNLSDLAAMGADPAWLTLALTLPEVDEPWLEA
                     FSDSLFALLNYYDMQLIGGDTTRGPLSMTLGIHGYIPAGRALKRSGAKPGDWIYVTGT
                     PGDSAAGLAVLQNRLQVSEETDAHYLIQRHLRPTPRILHGQALRDIASAAIDLSDGLI
                     SDLGHIVKASGCGARVDVDALPKSDAMMRHVDDGQELRWALSGGEDYELCFTVPELNR
                     GALDVAIGQLGVPFTCIGQMSADIEGLNFVRDGMPVTFDWKGYDHFATP"
     gene            complement(1758..2177)
                     /gene="nusB"
                     /locus_tag="MOX77_004512"
     CDS             complement(1758..2177)
                     /gene="nusB"
                     /locus_tag="MOX77_004512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HCA3359885.1"
                     /translation="MKPAARHRARECAVQALYSWQLSQNDIADVEYQFLAEQDVKDVD
                     VLYFRELLSGVATNSAYLDGLMKPYLSRLLEELGQVEKAVLRIALFELSKRSDVPYKV
                     AINEAIELAKTFGAEDSHKFVNGVLDKAAPVIRPNKK"
     gene            complement(2198..2668)
                     /gene="ribE"
                     /locus_tag="MOX77_004513"
     CDS             complement(2198..2668)
                     /gene="ribE"
                     /locus_tag="MOX77_004513"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006818760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HCA3359886.1"
                     /translation="MNIIKANVAAPDARVAITIARFNQFINDSLLDGAVDALTRIGQV
                     KDDNITVVWVPGAYELPLATEALAKSGKYDAVVALGTVIRGGTAHFEYVAGGASNGLA
                     SVAQDSGVPVAFGVLTTESIEQAIERAGTKAGNKGAEAALTALEMINVLKAIKA"
     gene            complement(2757..>3321)
                     /gene="ribD"
                     /locus_tag="MOX77_004514"
     CDS             complement(2757..>3321)
                     /gene="ribD"
                     /locus_tag="MOX77_004514"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HCA3359887.1"
                     /translation="QRLRAQSHAILTSSATVLADDPALTVRWAELDASTQASYPQENL
                     RQPVRIVIDSQNRVTPAHRIVQQPGETWIARTQEDSHAWPDSVRTISVPAHNGHLDLV
                     VLMMQLGRQQINSIWVEAGPGLAGALLQAGLVDELIVYVAPKLLGTQARGLCELPGLE
                     KLADAPQFTFSEIRHVGPDVCLHMVSA"
BASE COUNT          794 a          996 c          829 g          702 t
ORIGIN      
        1 cagttagatg agttgctgaa tgccgttgat ttaacgctca aaccggagca gattgccgaa
       61 ctcgaaacac cgtacaagca gcatccggtg gtgggattta aataatctgc cattgcccga
      121 tggcgcggcg cttatcgggc ctgcgaaatc gacatattgt tcggaggcag gccggataag
      181 gcgtttatgc cgccatccgg caaacccttt aaataatacc gagcggccag tgatgaccga
      241 taaaatacag tatgccagcg gatatcaccc cggcgacgat atcatcgatc attatcccca
      301 tgccgccgtg cacgttgcga tcaaaccaac ggatcggcca gggtttccac atatctagaa
      361 tgcggaaaat aacgaacccg gcagccaccc attgccagtc cgtcgtcggc aacgccatta
      421 gcgttatcca cataccgata aattcatccc agacaatact gccgtggtcg tgtacgccca
      481 tatctttcgc cgtctgatgg caaagataaa cgccaatgca gattccaaac atcacgacca
      541 gcgaataaag ctgccacggc agaaacgtca tcagatacca gaaggggatc gccgccagag
      601 agcccatcgt acccggcacc acggggctca gcccgctgcc aaagccggta gcgagcagat
      661 gccacggatt gcgcaaattc aggcgacttt tcgcaacatc tttatggcgt ggcaaaatgg
      721 tcatatcctt tccagtcgaa ggtgacaggc attccgtcac gtacaaaatt cagcccttca
      781 atatctgcgc tcatttggcc tatgcaggta aagggaacac ccagttgacc aatggcgaca
      841 tccagcgcgc cacggttcag ttccggcacc gtaaagcaca actcatagtc ttcgccgccg
      901 gaaagcgccc aacgcagctc ctgcccgtca tcaacatggc gcatcatcgc atcggatttt
      961 ggcaacgcat caacatccac tcttgcccca cagccgctgg ccttgacgat atgccccaga
     1021 tcggaaatca gaccatcgga aagatcgata gccgcgctgg cgatgtcacg cagcgcctgg
     1081 ccgtgtaaaa tacgcggcgt cgggcgtaaa tgccgttgaa ttaaatagtg agcatcggtc
     1141 tcctccgaca cctgtagccg gttttgcaaa accgccagcc cggcagcgct gtcgcccggc
     1201 gtaccggtga cataaatcca gtcgcccggc ttcgcgccag atcgcttgag cgcgcgccct
     1261 gccgggatat aaccgtggat acccagcgtc atcgacagcg gtccacgcgt ggtgtcgccg
     1321 ccaatgagct gcatatcgta gtaattcaat agcgcaaaca ggctgtcgct aaaagcctcc
     1381 agccacggct catccacttc cggtagcgtt aacgccagcg ttaaccaggc cgggtcggcc
     1441 cccatcgcgg ccagatcgct taaattcacc gccaacgctt tataagccag atcggcagga
     1501 tcgatatcag ggaggaagtg gttgcccgcc accagcgtat cggtactgat cgccagggtc
     1561 tgcttttcag gaatattcag gagcgcgcaa tcgtcgccaa taccggtttc aacatcaaga
     1621 cgagagcttc ttacacggtc aaaataacgg gcaatcaggg aaaactcgcc acatgccata
     1681 cgttatgcct cagcagaaaa aaagaaaagg ccggagacgg cgggtatcga tcgcccgcta
     1741 tctttccggc ctgtgaatca ctttttgttg ggacgaatca ccggagctgc tttatccagt
     1801 acgccgttga cgaatttgtg gctgtcttca gcgccaaagg ttttcgccag ttcaatcgct
     1861 tcgttgatgg ccactttata aggcacatcg ctgcgttttg acagctcaaa caacgcaata
     1921 cgcagcacgg ctttttcaac ctgtcccagc tcttcaagca ggcgggacag atacggtttc
     1981 attaaaccat ccaggtacgc gctgttagtc gccaccccgg atagcagttc acggaaatag
     2041 agaacgtcga cgtcttttac gtcctgttcc gccaggaact ggtattcaac atcagcgatg
     2101 tcgttctggg acaactgcca ggagtaaagc gcctggacgg cacactcacg ggcgcggtga
     2161 cgagcagcag gtttcacgga attcccctta caaaaaatca ggccttaatg gctttcaata
     2221 cattaatcat ttcaagcgcg gtcagcgcag cttctgcgcc tttattaccg gcttttgtac
     2281 cagcacgttc gatggcttgt tcaatactct cggtggtcag aacaccaaag gctaccggca
     2341 cgccgctgtc ctgggcaacg cttgccaggc cattgctggc gccgcctgcc acatattcaa
     2401 agtgcgcagt ccccccgcga atcacggttc ccagcgcaac cacggcgtcg tatttaccgc
     2461 ttttcgccag cgcttcggtc gccagcggca gttcataagc gccaggcacc cacactacgg
     2521 taatattatc atcttttacc tgaccaatac gcgtcagggc atcaaccgcg ccatccagca
     2581 ggctgtcgtt gataaactga ttgaaacgcg caatagtgat ggcgacacga gcgtcagggg
     2641 ctgcaacgtt agctttaata atgttcatat tctctcttcc agggttcatt tggccccgca
     2701 ggggggcgga ttttatcata ataatttgag cgctgctccc ctttcgacgg gagaactcat
     2761 gcgctcacca tatgcaggca aacatccggg ccgacatgac gtatttcgct gaaggtaaat
     2821 tgcggcgcgt cggcgagctt ctcaagcccc ggcaattcgc ataatccccg cgcctgggtt
     2881 cccaacaatt taggcgcgac atagacaatc agttcatcca ccagcccggc ttgcagcaac
     2941 gcgcccgcca gtcccggtcc ggcctcaacc catatgctat taatctgctg cctgcctaac
     3001 tgcatcatca gcacaaccag atccaaatgt ccgttgtgcg ccggcacgct gatagtacga
     3061 accgaatcgg gccacgcgtg gctatcttcc tgggtacgcg caatccacgt ttcgccaggc
     3121 tgctgcacaa tacgatgcgc aggcgttacc cggttttggc tgtcgataac aattcgcacc
     3181 ggctggcgca gattttcctg cgggtaagac gcctgtgtag aggcgtctaa ctccgcccaa
     3241 cgcaccgtca aggccggatc gtcagccaat accgtcgcgc tactggttaa aatagcgtgg
     3301 ctttgcgcac gcaagcgctg a
//
LOCUS       DAGWFR010000284         3310 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.287, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000284 DAGWFR010000000
VERSION     DAGWFR010000284.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 3310)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3310)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3310
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.287"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..2277)
                     /gene="mdtB"
                     /locus_tag="MOX77_004515"
     CDS             complement(<1..2277)
                     /gene="mdtB"
                     /locus_tag="MOX77_004515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit MdtB"
                     /protein_id="HCA3359888.1"
                     /translation="MQVLPPGSTGGPSRLFILRPVATTLLMAAILLAGIIGYRFLPVA
                     ALPEVDYPTIQVVTLYPGASPDVMTSSVTAPLERQFGQMSGLKQMSSQSSGGASVVTL
                     QFQLTLPLDVAEQEVQAAINAATNLLPSDLPNPPIYSKVNPADPPIMTLAVTSNAMPM
                     TQVEDMVETRVAQKISQVSGVGLVTLAGGQRPAVRVKLNAQAIAALGLTSETVRTAIT
                     GANVNSAKGSLDGPERAVTLSANDQMQSADEYRKLIIAYQNGAPVRLGDVATVEQGAE
                     NSWLGAWANQAPAIVMNVQRQPGANIIATADSIRQMLPQLTESLPKSVKVTVLSDRTT
                     NIRASVRDTQFELMLAIALVVMIIYLFLRNIPATIIPGVAVPLSLIGTFAVMVFLDFS
                     INNLTLMALTIATGFVVDDAIVVIENISRYIEKGEKPLAAALKGAGEIGFTIISLTFS
                     LIAVLIPLLFMGDIVGRLFREFAVTLAVAILISAVVSLTLTPMMCARMLSRQSLRKQN
                     RFSRACERMFDRVIASYGRGLAKVLNHPWLTLSVAFATLLLSVMLWITIPKGFFPVQD
                     NGIIQGTLQAPQSSSYASMAQRQRQVAERILQDPAVQSLTTFVGVDGANPTLNSARLQ
                     INLKPLDARDDRVQQVISRLQTAVATIPGVALYLQPTQDLTIDTQVSRTQYQFTLQAT
                     TLDALSHWVPKLQNALQSLPQLSEVSSDWQDRGLAAWVNVDRDSASRLGISMADVDNA
                     LYNAFGQRLISTIYTQANQ"
     gene            complement(2277..>3310)
                     /gene="mdtA"
                     /locus_tag="MOX77_004516"
     CDS             complement(2277..>3310)
                     /gene="mdtA"
                     /locus_tag="MOX77_004516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="multidrug efflux RND transporter subunit MdtA"
                     /protein_id="HCA3359889.1"
                     /translation="VPRYLSGLGTVTAANTVTVRSRVDGQLIALHFQEGQQVNAGDLL
                     AQIDPSQFKVALAQAQGQLAKDNATLANARRDLARYQQLAKTNLVSRQELDAQQALVN
                     ETQGTIKADEANVASAQLQLDWSRITAPVSGRVGLKQVDVGNQISSSDTAGIVVITQT
                     HPIDLIFTLPESDIATVVQAQKAGKTLVVEAWDRTNSHKLSEGVLLSLDNQIDPTTGT
                     IKIKARFTNQDDTLFPNQFVNARMLVDTEQNAVVVPAAAVQMGNEGHFVWVLNDENNV
                     SKKRVKIGIQDNRNVVISAGLSAGDRVVTDGIDRLTEGAKVEVVEPQTTMADEKSPSR
                     HEGQKGARA"
BASE COUNT          685 a          953 c          951 g          721 t
ORIGIN      
        1 ctggttcgcc tgggtataaa tcgttgaaat caggcgttgt ccgaacgcgt tgtagagcgc
       61 gttatccaca tccgccatgc tgatacccag acggctggcg ctgtcgcggt cgacattcac
      121 ccaggccgct aatccccgat cttgccagtc gctgcttacc tcagagagct gtggtaacga
      181 ctgtagcgcg ttctgcagtt ttggcaccca gtggctgagc gcatcgagcg tcgtggcctg
      241 cagggtaaac tgatactgcg tgcggctgac ctgcgtgtcg atggttaaat cctgcgtcgg
      301 ctggagatac agcgccacgc cgggaatcgt cgccacggcg gtttgcagcc gggagatcac
      361 ctgctgcacg cggtcatcac gcgcatccag cggcttgagg ttaatttgca ggcgcgcgct
      421 attcagcgtg ggattagcgc cgtctacgcc aacaaaagtc gtcaggcttt gcaccgccgg
      481 gtcctgtaat atccgctccg ccacctggcg ctgacgttgc gccatactgg catacgatga
      541 tgattgtggc gcctgcagcg tcccctggat aatgccgtta tcctgtaccg gaaagaaccc
      601 tttcgggatg gttatccaca gcataacgct gagcaggagc gtggcgaatg ccacgctcaa
      661 tgtaagccat ggatggttga gcactttcgc taatccgcgt ccgtagctgg cgatcacgcg
      721 gtcaaacatc cgctcgcagg cgcgggaaaa gcggttttgt ttacgcagag actgccggct
      781 gagcatacgc gcgcacatca tgggcgtaag cgtcaaagag acgacggcgg agattaaaat
      841 cgctaccgcc aacgtcaccg caaattcgcg gaacagtcga ccaacaatat cgcccataaa
      901 gagcaacggg atcagtaccg caatcaggga aaaggtgagg gaaataatgg taaagccgat
      961 ttcgcccgcg cctttgagcg ccgccgccag cggtttttct cctttttcga tgtagcgcga
     1021 gatgttctcg atcaccacaa tcgcatcgtc caccacgaaa cccgtggcga tagtgagcgc
     1081 catcagcgtc aggttattaa tggaaaaatc caaaaacacc atcactgcaa aggtgccgat
     1141 aagcgacagc ggtacggcga cgccgggaat aattgtggcg ggaatattac gtaaaaacag
     1201 atagataatc atgacgacca gcgcgatcgc cagcatcagt tcaaactggg tatcgcgcac
     1261 ggaagcgcga atattggtgg tgcgatcgga caggaccgtg accttcaccg atttcggcag
     1321 gctttcggta agctggggca gcatctggcg aatgctgtcc gctgtcgcaa tgatattggc
     1381 gccgggctgg cgttgaacgt tcatcacgat agccggagct tgattcgccc atgcgccgag
     1441 ccagctattt tccgccccct gttcgacggt ggcgacatcg cccagccgta ccggcgcgcc
     1501 gttttgatac gcgatgataa gcttgcggta ttcgtcggca gactgcatct gatcgttagc
     1561 agaaagcgtc accgcccgtt cggggccatc cagactgcct ttcgccgagt tgacgttggc
     1621 gccggtaatt gcggtacgga ctgtttcgct ggtcagaccg agcgcggcga tagcctgagc
     1681 attcagtttt acgcgtaccg cagggcgctg cccgccggca agcgtcacca gcccgacgcc
     1741 ggagacctgt gagatcttct gcgccacgcg ggtttctacc atgtcctcta cctgggtcat
     1801 cggcatcgcg tttgaggtga cggcaagcgt cataatcggc gggtccgccg gattgacttt
     1861 gctataaatc ggcggattcg gcaggtcgga aggcaataaa ttggtggctg cgttaatcgc
     1921 cgcctgtact tcctgctcgg caacgtccag cggcagcgtc aactgaaact gtagcgtcac
     1981 caccgatgcg ccgccggagc tttgcgacga catctgctta agtcctgaca tctggccgaa
     2041 ctggcgctca agcggcgcgg tgacggagga ggtcatgaca tccgggctgg cgccagggta
     2101 gagcgtaacc acctgaatag tggggtagtc gacctccggc aaagcggcga cgggcaggaa
     2161 gcgatagccg ataatcccgg cgagtaaaat cgccgccatc agcagagtgg tggccacggg
     2221 gcgcagaata aacagacgcg aagggccgcc cgtgctgccc ggaggtaata cctgcatcag
     2281 gcgcgcgctc ctttttgacc ttcatggcgg gaaggggatt tttcatccgc catggtggtt
     2341 tgcggctcaa cgacctcgac ttttgcgcct tccgtcagcc gatcaatacc atcggtaacg
     2401 acgcgatcgc ctgccgacaa tcctgcgctg atcaccacgt ttcggttatc ctgaataccg
     2461 atttttaccc gcttcttgct gacgttattt tcgtcgttca gcacccacac aaagtggccc
     2521 tcattgccca tttgcaccgc cgcggcaggc accacaacgg cattttgttc ggtatcgacc
     2581 agcatccggg cgttcacaaa ttgattgggg aacagcgtat cgtcctgatt ggtaaagcgc
     2641 gctttaattt tgatcgttcc cgtcgtggga tcaatctggt tgtccagact gagcaacacg
     2701 ccttcgctca atttgtgcga gttagttcga tcccaggctt ctacgaccag cgttttcccc
     2761 gctttctgtg cctgaaccac ggtcgcgata tcgctttccg gcagagtaaa aatgagatca
     2821 atcgggtgcg tttgcgtaat gacgacaata cctgcggtat cgctgctgga aatctggttg
     2881 ccgacatcca cctgtttcag acccacgcgt cccgagaccg gggctgtgat acgactccag
     2941 tcgagctgta gctgcgcgct ggcgacattg gcttcatccg ctttaatggt tccctgggtt
     3001 tcgttgacca gcgcctgttg cgcatccagt tcctgacggg aaaccagatt ggttttggcc
     3061 agttgctgat agcgcgccag atcacgacgc gcattcgcca acgtagcgtt atctttcgct
     3121 aactgtccct gagcctgcgc cagggcgacc ttaaactggc tgggatcgat ttgcgccagc
     3181 agatcgcctg cgttaacctg ctgaccttcc tgaaagtgca gggcgatgag ttgaccatcc
     3241 acgcggctac gcaccgtaac ggtattcgct gcggtcacgg tacccagccc gctcagatag
     3301 cgcggtacag
//
LOCUS       DAGWFR010000285         3302 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.288, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000285 DAGWFR010000000
VERSION     DAGWFR010000285.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 3302)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3302)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3302
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.288"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            102..3107
                     /locus_tag="MOX77_004517"
     rRNA            102..3107
                     /locus_tag="MOX77_004517"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
     gene            3210..>3302
                     /gene="rrf"
                     /locus_tag="MOX77_004518"
     rRNA            3210..>3302
                     /gene="rrf"
                     /locus_tag="MOX77_004518"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
BASE COUNT          872 a          737 c         1022 g          671 t
ORIGIN      
        1 tcaagctgaa aattgaaaca cagaacaacg aaagttgttc gtgagtctct caaattttcg
       61 caacacgatg atgaatcgaa agaaacatct tcgggttgtg aggttaagcg actaagcgta
      121 cacggtggat gccctggcag tcagaggcga tgaagggcgt gctaatctgc gataagcgcc
      181 ggtaaggtga tatgaaccgt tataaccggc gatacccgaa tggggaaacc cagtgtgatt
      241 cgtcacacta tcattaactg aatccatagg ttaatgaggc gaaccggggg aactgaaaca
      301 tctaagtacc ccgaggaaaa gaaatcaacc gagattcccc cagtagcggc gagcgaacgg
      361 ggaggagccc agagcctgaa tcagcatgtg tgttagtgga agcgtctgga aaggcgcgcg
      421 atacagggtg acagccccgt acacaaaagc gcatatgctg tgagctcgat gagtagggcg
      481 ggacacgtgg tatcctgtct gaatatgggg ggaccatcct ccaaggctaa atactcctga
      541 ctgaccgata gtgaaccagt accgtgaggg aaaggcgaaa agaaccccgg cgaggggagt
      601 gaaaaagaac ctgaaaccgt gtacgtacaa gcagtgggag ccccaccact aagccagtgg
      661 tgaactccac atacgcatcc tttgctgagg agacggttaa cggagcgaaa gcgacgttca
      721 acctcaaaag aagcagaggg ggcttagtgg tggggtgact gcgtaccttt tgtataatgg
      781 gtcagcgact tatattctgt agcaaggtta actgtatagg ggagccggag ggaaaccgag
      841 tcttaaccgg gcgttaagtt gcagggtata gacccgaaac ccggtgatct agccatgggc
      901 aggttgaagg ttgggtaaca ctaactggag gaccgaaccg actaatgttg aaaaattagc
      961 ggatgacctg tggctggggg tgaaaggcca atcaaaccgg gagatagctg gttctccccg
     1021 aaagctattt aggtagcgcc tcgtgaattc atctccgggg gtagagcact gtttcggcta
     1081 gggggccatc ccggcttacc aacccgatgc aaactgcgaa taccggagaa tgttatcacg
     1141 ggagacacac ggcgggtgct aatgtccgtc gtgaagaggg aaacaaccca gaccgccagc
     1201 taaggtccca aagtcatggt taagtgggaa acgatgtggg aaggcccaga cagccaggat
     1261 gttggcttag aagcagccat catttaaaga aagcgtaata gctcactggt cgagtcggcc
     1321 tgcgcggaag atgtaacggg gctaaaccat gcaccgaagc tgcggcagcg acaccgtgtg
     1381 ttgttgggta ggggagcgtt ctgtaagcct gtgaaggtgt gctgtgaggc atgctggagg
     1441 tatcagaagt gcgaatgctg acataagtaa cgataaagcg ggtgaaaagc ccgctcgccg
     1501 gaagaccaag ggttcctgtc caacgttaat cggggcaggg tgagtcgacc cctaaggcga
     1561 ggccgaaagg cgtagtcgat gggaaacggg ttaatattcc cgtacttggt gttactgcga
     1621 aggggggacg gagaaggcta tgttggccgg gcgacggttg tcccggttta agcgtgtagg
     1681 tatgtgttcc aggtaaatcc ggttcacttt aacactgagg cgtgacgacg aggcactacg
     1741 gtgctgaagc aacaaatgcc ctgcttccag gaaaagcctc taagcatcag gtaacatcaa
     1801 atcgtacccc aaaccgacac aggtggtcag gtagagaata ccaaggcgct tgagagaact
     1861 cgggtgaagg aactaggcaa aatggtgccg taacttcggg agaaggcacg ctgacacgta
     1921 ggtgaagtga tttactcacg gagctgaagt cagccgaaga taccagctgg ctgcaactgt
     1981 ttattaaaaa cacagcactg tgcaaacacg aaagtggacg tatacggtgt gacgcctgcc
     2041 cggtgccgga aggttaattg atggggtcag cgcaagcgaa gctcctgatc gaagccccgg
     2101 taaacggcgg ccgtaactat aacggtccta aggtagcgaa attccttgtc gggtaagttc
     2161 cgacctgcac gaatggcgta atgatggcca ggctgtctcc acccgagact cagtgaaatt
     2221 gaactcgctg tgaagatgca gtgtacccgc ggcaagacgg aaagaccccg tgaaccttta
     2281 ctatagcttg acactgaaca ttgagccttg atgtgtagga taggtgggag gctttgaagt
     2341 gtggacgcca gtctgcatgg agccgacctt gaaataccac cctttaatgt ttgatgttct
     2401 aacgtggacc cgtgatccgg gttgcggaca gtgtctggtg ggtagtttga ctggggcggt
     2461 ctcctcctaa agagtaacgg aggagcacga aggttggcta atcctggtcg gacatcagga
     2521 ggttagtgca atggcataag ccagcttgac tgcgagcgtg acggcgcgag caggtgcgaa
     2581 agcaggtcat agtgatccgg tggttctgaa tggaagggcc atcgctcaac ggataaaagg
     2641 tactccgggg ataacaggct gataccgccc aagagttcat atcgacggcg gtgtttggca
     2701 cctcgatgtc ggctcatcac atcctggggc tgaagtaggt cccaagggta tggctgttcg
     2761 ccatttaaag tggtacgcga gctgggttta gaacgtcgtg agacagttcg gtccctatct
     2821 gccgtgggcg ctggagaact gaggggggct gctcctagta cgagaggacc ggagtggacg
     2881 catcactggt gttcgggttg tcatgccaat ggcactgccc ggtagctaaa tgcggaagag
     2941 ataagtgctg aaagcatcta agcacgaaac ttgccccgag atgagttctc cctgagactt
     3001 taggtctcct gaaggaacgt tgaagacgac gacgttgata ggccgggtgt gtaagcgcag
     3061 cgatgcgttg agctaaccgg tactaatgaa ccgtgaggct taaccttaca acgccgaaga
     3121 tgttttggcg gatgagagac gattttcagc actgattccg gattttcggg aacgaaagat
     3181 aaaagattcg tttccggcaa cagaatttgc ctggcggcac tagcgcggtg gtcccacctg
     3241 accccatgcc gaactcagaa gtgaaacgcc gtagcgccga tggtagtgtg gggtctcccc
     3301 at
//
LOCUS       DAGWFR010000286         3282 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.289, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000286 DAGWFR010000000
VERSION     DAGWFR010000286.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 3282)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3282)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3282
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.289"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..701)
                     /gene="norW"
                     /locus_tag="MOX77_004519"
     CDS             complement(<1..701)
                     /gene="norW"
                     /locus_tag="MOX77_004519"
                     /EC_number="1.18.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:flavorubredoxin reductase NorW"
                     /protein_id="HCA3359890.1"
                     /translation="MSRGIIIIGSGFAARQLVKNIRKQDAHVPLTLIAADSMDEYNKP
                     DLSHVISQSQRADDLTRQLAGEFAEQFNLRLFPHTWVTDIDADAHVVKSQDKQWQYDK
                     LVLTTGATAFVPPIAGRELMLTLNSQQEYRACETPLRDAQRVLIVGGGLIGSELAMDF
                     CRAGKTVTLMDNAASLLASLMPPEVSSRLQHHLTDMGVHLLLKSQLQKLEKTEAGIRA
                     TLVSQHSIEVDAVIAA"
     gene            complement(698..2137)
                     /gene="norV"
                     /locus_tag="MOX77_004520"
     CDS             complement(698..2137)
                     /gene="norV"
                     /locus_tag="MOX77_004520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic nitric oxide reductase
                     flavorubredoxin"
                     /protein_id="HCA3359891.1"
                     /translation="MSILVKNNIHWVGQRDWEVRDFHGTEYKTLRGSSYNSYLIREEK
                     NVLIDTVDHKFSREFVQNLRSEIDLADIDYIIINHAEEDHAGALTELMAQIPDTPIYC
                     TANAIDSINGHHHHPEWNFKVVKTGDTLDIGDGKQLIFVETPMLHWPDSMMTYMTGDA
                     VLFSNDAFGQHYCDEHLFNDEVDQTELFEQCQRYYANILTPFSRLVTPKITEILGFNL
                     PVDMIATSHGVVWRDNPTQIVELYLKWAADYQEDRITIFYDTMSNNTRMMADAIAQGI
                     NEVDPNVAVKIFNVARSDKNEILTNVFRSKGVLVGTSTMNNVMMPKIAGLVEEMTGLR
                     FRNKRASAFGSHGWSGGAVDRLSTRLQDAGFEMSLSLKAKWRPDLDALELCRQHGRDI
                     ARQWALAPLPETTQKTAPVEETTTCTAADLGPKMQCSVCQWIYDPALGEPLQDVAPGT
                     PWSDVPDNFLCPECSLGKDVFDVLATEAK"
     gene            2323..>3282
                     /gene="norR"
                     /locus_tag="MOX77_004521"
     CDS             2323..>3282
                     /gene="norR"
                     /locus_tag="MOX77_004521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitric oxide reductase transcriptional regulator
                     NorR"
                     /protein_id="HCA3359892.1"
                     /translation="MSFSVEVLAGIAIELQRGIGHQDRFQRLITTLRQVLACDASALL
                     RYESRQFIPLAIDGLAQDVLGRRFTLEGHPRLEAIARAGDVVRFPADSDLPDPYDGLI
                     PGQESLKVHACVGLPLFAGQNLIGALTLDAMTPEQFEVFSDEELRLVAALAAGALSNA
                     LLIEQLESQNMLPGSSGVFEPIKETHMIGLSPAMTQLKKEIEIVAGSDLNVLIGGETG
                     TGKELVAKAIHQGSPRAVNPLVYLNCAALPESVAESELFGHVKGAFTGAISNRSGKFE
                     MADNGTLFLDEIGELSLALQAKLLRVLQYGDIQRVGDDRSLRVD"
BASE COUNT          708 a          853 c          907 g          814 t
ORIGIN      
        1 gcggcaatca ccgcatcgac ctcaatacta tgctggctta ccagcgtagc gcggataccg
       61 gcttcggttt tctccagttt ttgcaactgc gatttcagca gcagatgcac ccccatatcg
      121 gtcaggtgat gctgtaagcg actgctcact tccggtggca tcagtgaggc gagaaggctg
      181 gcggcgttat ccatcagcgt taccgttttc ccggcgcggc agaaatccat tgctaattca
      241 ctgccaatga gaccgccgcc gacaatcagc actcgctgcg cgtcgcgcag tggtgtctca
      301 caggcgcggt actcctgctg gctattcaaa gtaagcatta actcacgtcc tgcaatcggc
      361 ggcacaaagg ctgtcgcccc ggtcgtcagt accagcttgt cgtactgcca ctgcttatcc
      421 tgacttttca ccacatgggc atcggcatca atgtcagtaa cccaggtatg cgggaacagt
      481 cgtagattaa actgttcagc aaattccccc gctaactggc gggtgagatc atcggcgcgc
      541 tgcgactggc tgataacgtg gctgagatcg ggcttgttgt actcatccat gctgtccgcc
      601 gcaatcagag ttaacggcac atgcgcatct tgtttacgga tatttttgac gagctggcgg
      661 gcggcgaagc ccgacccaat aatgatgatc ccccgactca ttttgcctcc gtcgccagta
      721 cgtcgaacac gtctttacct aatgaacatt ccgggcacag gaagttatcc ggcacgtcgc
      781 tccacggcgt acccggcgcg acatcctgca acggctcgcc cagcgcaggg tcgtaaatcc
      841 actggcatac gctgcattgc attttggggc cgaggtctgc ggcggtgcag gttgtggttt
      901 cttcgactgg cgcggttttc tgtgtggttt ccggcagcgg agcaagcgcc cactgacggg
      961 cgatgtcgcg accatgctga cggcacaact ccagcgcatc cagatccgga cgccatttcg
     1021 ctttcagact cagggacatt tcaaaaccgg catcctgtaa gcgcgtggac agtcgatcca
     1081 ccgcgccgcc gctccagcca tgagaaccga aggcgctggc gcgtttgttg cgaaagcgca
     1141 ggccggtcat ctcttccacc agaccagcga ttttcggcat catcacgttg ttcatggtag
     1201 aagtgccgac cagcacgcct ttcgaacgga agacgttggt caatatttca tttttatcgc
     1261 tgcgggcgac gttaaagatt ttgaccgcca cgttggggtc cacttcattg ataccctgtg
     1321 cgatggcatc cgccatcatg cgagtattgt tcgacatggt atcgtagaaa atagtgatac
     1381 gatcttcctg ataatctgcc gcccatttca gatacagctc cacgatttgc gttgggttgt
     1441 cgcgccatac cacgccgtgt gaggtggcaa tcatatccac cggcaggttg aagccgagga
     1501 tttcggtaat ttttggcgtt accagacggc tgaacggcgt caggatattg gcgtagtagc
     1561 gctggcattg ttcaaacagt tcagtttggt ccacttcatc attgaacagg tgctcgtcgc
     1621 agtagtgctg accaaaggcg tcgttgctga ataacaccgc gtcgccggtc atataggtca
     1681 tcatgctgtc cggccagtgc agcatcggcg tttccacgaa gatcaactgc ttgccgtcgc
     1741 cgatatccag cgtatcgccg gttttcacca ccttaaaatt ccattccggg tgatggtgat
     1801 ggccgttgat agagtcaatg gcgttggcgg tacagtagat aggcgtgtcc gggatctgcg
     1861 ccatcagttc ggtcagcgcg cctgcatggt cttcttcggc atggttaatg atgatgtagt
     1921 cgatgtccgc gaggtcgatt tcactgcgca gattttgcac aaactcacgg ctaaacttat
     1981 gatcgacggt atcgatcagc acattctttt cttcacgaat gagatagctg ttatagctgc
     2041 tgccacgcag cgttttgtat tcagtgccgt gaaaatcacg tacttcccag tcgcgttggc
     2101 caacccaatg aatattattt ttaaccagaa tagacataac cacctcaatt cattcaacgt
     2161 ttgcaaaaag ttgttttgct tattgcaggt agtgtgccaa ctttacatct tattgattta
     2221 tatgaaatta taataatttt gtatttttgg tatagtcaaa aagactataa atgatgctgt
     2281 caatatgaca ctatagattg tcaaaatgac aatgaggtaa ccatgagttt ttccgtggag
     2341 gtattggcgg gcatcgccat tgagttacaa cgcggcattg ggcatcagga tcgttttcag
     2401 cggctgatta ctacgctgcg tcaggtgctg gcgtgcgacg cctcggcgct gctgcgttat
     2461 gaatcacgac aatttattcc actggcgatt gatggcctgg cgcaggacgt cctcggcaga
     2521 cgttttaccc tggaagggca tccgcgcctg gaagccatcg cccgcgcggg ggacgtggtg
     2581 cgttttccgg ctgatagcga tttacccgat ccatatgacg ggttaattcc cggacaggaa
     2641 agcctgaaag tccacgcctg tgttggtctg ccgctgtttg ccggacagaa cctcatcggt
     2701 gcgctgaccc ttgatgctat gacgccggag cagttcgagg tatttagcga tgaagaacta
     2761 cggcttgtcg ccgcgctggc cgccggggca ttgagtaatg cgctgttaat tgaacaactg
     2821 gaaagccaga acatgctgcc ggggtcgtca ggcgtgtttg aaccgataaa agagacgcac
     2881 atgatcggtc tgtcgccggc gatgacgcag ttgaaaaaag agatcgagat tgtggcgggc
     2941 tccgatctta acgtgctgat cggcggtgaa acggggaccg gtaaagagct ggtggcgaaa
     3001 gctattcacc agggctcccc cagagcggtc aatccgctgg tctatctcaa ctgcgccgcg
     3061 ctgccggaaa gcgtggcgga gagcgagttg tttggtcatg taaaaggggc ttttaccggg
     3121 gctatcagta atcgtagcgg taagtttgaa atggcggata acggtacgct gtttctggat
     3181 gagattggcg aactgtcgct ggcgctacag gccaagctac ttcgcgtgtt gcagtatggc
     3241 gatattcagc gcgtcggcga cgatcgtagc ctgcgcgtgg at
//
LOCUS       DAGWFR010000287         3240 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.290, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000287 DAGWFR010000000
VERSION     DAGWFR010000287.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 3240)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3240)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3240
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.290"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..>3240
                     /locus_tag="MOX77_004522"
     CDS             <1..>3240
                     /locus_tag="MOX77_004522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001237670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Ig-like domain repeat protein"
                     /protein_id="HCA3359893.1"
                     /translation="DSHHHSDGDNPPPDNTNPDGNPPDNSNPGGSNPNGNTPGSSNPV
                     DTTPPLAPGELLISADGKTVSGEAEAGSLITIKDPSGNVVGEGKADSDGKFSIDLTAP
                     QISGEQLTVTATDDAGNTGPSATIDAPNIPLPDTPVITAAIDDAAPLTGTLSNNQFTN
                     DNTPTLEGTGSAGTVIHIYANGQEIGSTTVDTSGNWHFAITSALADGENHFTAIATNV
                     KGESSESARFTLTIDTLSPDAPRVELMADNTGLLTGPLQNNDRTDEAKPLFSGQGEAG
                     NTITIKEGSTVIGSATVDENGRWTFTPTTPLSDGEHTFTVEQSDKAGNASRVTTTPTI
                     IVDTTPPDAAIIDNVAKDGTTVSGTAEAGSTVSIYDPAGNYLGSTITGENNHFSITLN
                     PAQTHGERLEARIQDAVGNIGPATEFTASDSQYPAQPTILTVTDDAGAVTGLLKNGDA
                     TDDNRPTLSGTAEPGSTISINDNGFPVPSFPPIVADADGKWSFTPSLALADGDHVFTA
                     TATNDRGTSGQSVAFTIDIDTQPPVLEGLAVSDVGDRLTGTTEAGSTVVIKDSLGNTL
                     GSGTAGDDGTFSIGISPAKINGETLSISVTDKAANSGPVETLNAPDKTAPAAPNGLIV
                     ATDGLSVSGQAEAGATVTIRDSSNTVLGSAVANGNGQFIVPLNAAQTNGQALIATATD
                     IANNESAAATVDAPDSTAPEMPKNVVISEDGASISGTAEPGSSITITTPDGTPLGSGK
                     ADGEGHFTLPLAPAQTNGGWTFTPSQNLGEGAHRLTVIATDAKGNASPAGNESPESIS
                     FTLRIDTQAPDAPQIVSAAITGGEGEVLLANGSITNQRMPTLSGTGEPGAIITLYNNG
                     VELATVQVNPQGSWTYPLTRNLSEGLNILTATATDAAGNSSPTSGVFSVTLDTQPPAQ
                     PDAPLISDNVAPVIGNIGNNGATNDTTPTFSGTGEIGSTIILYNNGSEIGRTTVGDNG
                     SWNFTPAALTPETYTITVTETDIAGNISPPSASVTFTLDTTAPANPVITFAEDNVGEV
                     QDTIVSGATTDDNTPVIHGTGDIGSVITLYNGSSVVGVVTVDETGTWTLP"
BASE COUNT          812 a          999 c          852 g          577 t
ORIGIN      
        1 cgattcccac catcattcgg atggcgataa tccgcccccc gataacacca atcctgacgg
       61 taatccccct gataacagca atcccggcgg cagtaaccct aacggcaata ctccaggtag
      121 cagtaatcct gtagatacta ccccgcctct cgctcccggc gaattattga tttcagcgga
      181 cggaaaaacg gtgagcggcg aggccgaagc gggcagtctc attaccatca aagatccctc
      241 aggcaacgtc gttggcgagg gcaaagcgga tagcgacggt aaatttagta ttgatctgac
      301 agcgccacag attagcggcg aacaacttac cgtgactgcg actgacgatg ccggcaatac
      361 cggcccatcc gcaaccattg atgcgcccaa cattcctctc cccgatacac cggttatcac
      421 cgccgctatc gatgatgccg ctcccctcac cggcacgctg agcaataatc agtttacgaa
      481 cgacaatacc cccactctgg agggcaccgg cagcgcaggc acagtcatcc atatttacgc
      541 caatggtcag gaaataggct caacaacagt tgataccagc ggaaactggc attttgccat
      601 taccagcgcg ctagcggatg gggaaaatca tttcaccgcc attgcgacta acgttaaagg
      661 cgaaagtagc gaatcagccc gctttacgct gactatcgac acactcagcc ccgatgctcc
      721 acgcgttgaa ctgatggccg ataacaccgg tttgctcacc ggaccgctac agaataatga
      781 ccggactgac gaggcaaaac cgctattttc cgggcaggga gaggcaggca ataccatcac
      841 gattaaagag ggttcaaccg ttatcggcag cgctaccgta gacgaaaatg gacgctggac
      901 ctttacgccg actacgccgt taagcgatgg cgaacatacc tttaccgtcg aacagagcga
      961 caaagccgga aacgcaagcc gcgtgacgac aacgcctact atcattgtgg acaccacgcc
     1021 gccggacgcc gctatcattg ataatgtcgc gaaagacggc acaaccgtta gcggcaccgc
     1081 tgaagctggc agtaccgtgt cgatctatga cccggcggga aattacctgg gctccacgat
     1141 taccggagaa aataaccact tcagcatcac gctgaatccg gcccagaccc acggcgagcg
     1201 tctggaagcg cgtattcagg acgccgtcgg taacatcggc cccgccacag agtttaccgc
     1261 ttctgactca cagtatcctg cccagccgac tatccttacc gtgacggatg acgctggcgc
     1321 cgttaccggg ctgttgaaaa atggcgatgc cacagatgat aaccgcccaa ccctcagcgg
     1381 tactgctgaa ccaggcagta cgatatcgat taacgataat ggctttcctg ttccgagctt
     1441 tccgcccatt gtcgctgacg ctgacggcaa atggagcttt accccctcgc tggcgcttgc
     1501 cgatggcgac catgtcttta ccgctaccgc gaccaacgat cgcggcacta gcgggcagtc
     1561 cgtcgccttt accattgata tcgacacgca gccgccggtg ctggaaggcc tggcagttag
     1621 cgacgtcggc gacagactca ccggcactac ggaagctggc agcactgtgg ttatcaaaga
     1681 tagcctggga aatacgctcg ggagtggaac ggcaggcgac gacggcacct tctcaatagg
     1741 tattagcccg gcgaaaatta acggtgaaac attaagcatt agcgttaccg ataaagccgc
     1801 gaatagcggt ccggtagaaa cgctgaacgc gccggataaa actgcgcctg cggcaccgaa
     1861 cggtcttatc gtggcgaccg acggtctgtc cgtaagcggt caggcggaag ccggggcaac
     1921 ggtcactatc cgcgacagta gcaataccgt acttggcagc gccgtcgcta acggcaacgg
     1981 acaatttatc gttccgctga atgcggcgca gactaacggc caggcgctta tcgctaccgc
     2041 caccgatata gcgaacaacg aaagcgccgc cgcgacggtc gacgcgccgg acagtaccgc
     2101 gccagaaatg ccgaaaaacg tggtaattag tgaggatggc gccagtatca gcggcaccgc
     2161 cgaaccgggt agctccatta cgatcaccac gccggacggc acgccgctcg gcagcggcaa
     2221 agcagatggc gaaggtcatt ttacccttcc cctcgccccc gcacagacca acggcggctg
     2281 gacgtttacg ccgtcgcaaa atttaggtga aggcgcgcat cgactgaccg taatcgcaac
     2341 cgacgctaaa ggcaatgcca gtccggcggg gaacgaaagt ccggaatcca tcagctttac
     2401 cctacgcatc gatacccagg cgccggatgc gccgcagatc gtgtcagccg ccatcacagg
     2461 cggagaaggc gaggtgctac tggcaaacgg cagtattacc aatcagcgta tgccgaccct
     2521 cagcggcacc ggcgaacccg gcgccatcat caccctgtac aataacggcg tagaactggc
     2581 taccgtccag gtcaatccac agggtagctg gacctatccg ctaacccgta atctgagcga
     2641 agggttaaac atcctgacgg ccaccgccac ggatgccgca ggcaatagta gcccgacctc
     2701 cggcgttttc tccgttaccc ttgataccca gcctccagcg cagcctgacg cgccgctaat
     2761 cagcgataac gtcgcgccgg ttatcggcaa catcggcaat aatggcgcaa cgaacgatac
     2821 cacgccgacc ttcagcggca cgggagagat cggcagcacg ataattctct acaataatgg
     2881 cagtgaaatt ggtcgcacaa cggtaggcga taacggtagc tggaacttta cgcctgcggc
     2941 actgacgcca gaaacctata ccattaccgt cacggaaacc gatatagcgg gcaatatcag
     3001 tccaccttcc gcctcagtca cttttacgct agacaccact gcgcccgcca atccggttat
     3061 cacttttgcc gaagataacg tcggcgaagt ccaggatact attgtcagcg gcgcaaccac
     3121 tgacgacaat acaccggtca ttcacggcac tggcgacatc ggcagcgtga tcacgctcta
     3181 taatggcagt agtgtcgtgg gcgtagtcac cgtcgatgag accggtacct ggacgctgcc
//
LOCUS       DAGWFR010000288         3237 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.291, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000288 DAGWFR010000000
VERSION     DAGWFR010000288.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 3237)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3237)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3237
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.291"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..105)
                     /locus_tag="MOX77_004523"
     CDS             complement(<1..105)
                     /locus_tag="MOX77_004523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxybenzoic acid transporter"
                     /protein_id="HCA3359894.1"
                     /translation="MGIFSIANQHIRFAVKLACAIVLALFIGFHFQLET"
     gene            complement(111..1043)
                     /gene="aaeA"
                     /locus_tag="MOX77_004524"
     CDS             complement(111..1043)
                     /gene="aaeA"
                     /locus_tag="MOX77_004524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="p-hydroxybenzoic acid efflux pump subunit AaeA"
                     /protein_id="HCA3359895.1"
                     /translation="MKTLTRKLSRTAITLVLVILAFIAIFRAWVYYTESPWTRDARFS
                     ADVVAIAPDVAGLITHVNVHDNQLVKKDQVLFTIDQPRYQKALAEAEADVAYYQVLAQ
                     EKRQEAGRRNRLGVQAMSREEIDQANNVLQTVLHQLAKAQATRDLAKLDLERTVIRAP
                     ADGWVTNLNVYAGEFITRGSTAVALVKKNSFYVQAYMEETKLEGVRPGYRAEITPLGS
                     NRVLKGTVDSVAAGVTNASSTSDAKGMATIDSNLEWVRLAQRVPVRIRLDEQQGNLWP
                     AGTTATVVITGKQDRDASQDSFFRKLAHRLREFG"
     gene            complement(1051..1254)
                     /locus_tag="MOX77_004525"
     CDS             complement(1051..1254)
                     /locus_tag="MOX77_004525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000051842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AaeX family protein"
                     /protein_id="HCA3359896.1"
                     /translation="MSLFPVIVVFGLSFPPIFFELLLSLAIFWLVRRMLVPTGIYDFV
                     WHPALFNTALYCCLFYLISRLFV"
     gene            1436..2365
                     /gene="aaeR"
                     /locus_tag="MOX77_004526"
     CDS             1436..2365
                     /gene="aaeR"
                     /locus_tag="MOX77_004526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional activator AaeR"
                     /protein_id="HCA3359897.1"
                     /translation="MERLKRMSVFAKVVEFGSFTAAARQLQMSVSSISQTVAKLEDEL
                     QVKLLNRSTRSIGLTEAGKIYYQGCRRMLHEVQDVHEQLYAFNNTPIGTLRIGCSSTM
                     AQNVLAGLTAKLLKEYPGLAVNLVTGIPAPDLIADGLDVVIRVGALQDSSLFSRRLGA
                     MPMVVCAAKPYLAQYGVPEKPADLSSHSWLEYSVRPDNEFELIAPEGISTRLIPQGRF
                     VTNDPMTLVRWLTAGTGIAYVPLMWVIDEINRGDLEILLPRYQSDPRPVYALYTEKDK
                     LPLKVQVVINALTDYFVDVAHLFQGMHGRGKEK"
     gene            complement(2488..>3237)
                     /gene="tldD"
                     /locus_tag="MOX77_004527"
     CDS             complement(2488..>3237)
                     /gene="tldD"
                     /locus_tag="MOX77_004527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease TldD"
                     /protein_id="HCA3359898.1"
                     /translation="MALVNLSAVAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRR
                     GTSVFSGQIGEQVASALCTVVDDGTMMNRRGSVAIDDEGTPGQYNVLIENGVLKGYMQ
                     DKLNARLMGAAPTGNGRRESYAHLPMPRMTNTYMLAGQSTPQEIIESVEYGIYAPNFG
                     GGQVDITSGKFVFSTSEAYLIENGKVTTPVKGATLIGSGIETMQQISMVGNDLKLDNG
                     VGVCGKEGQSLPVGVGQPTLKVDNLTVGGTA"
BASE COUNT          774 a          899 c          850 g          714 t
ORIGIN      
        1 cgtctccagc tgaaaatgga agccgataaa taatgccagc acaatggcgc acgccagctt
       61 taccgcaaaa cgaatgtgct ggttggcaat ggagaaaatg cccatgacga ttaaccgaat
      121 tcgcgcagcc ggtgcgccag tttacggaag aaggagtcct ggcttgcgtc acgatcctgc
      181 ttaccggtga tcacgacggt tgccgtcgta ccggcaggcc acaaattccc ctgctgctcg
      241 tcgagccgga tgcgcaccgg gacacgctgg gccagacgca cccattcgag gttagagtct
      301 atcgtcgcca tccctttcgc atcgctggta ctgctggcat tcgttacccc tgccgccacg
      361 ctatcgacgg tgccttttaa tacccggttg ctgccgagcg gcgtgatttc ggcacgatat
      421 cccggacgca cgccttccag cttggtctct tccatatagg cctgcacgta aaaagagttc
      481 tttttcacca gggcgacggc tgtggaaccg cgggtaataa attcaccggc ataaacattg
      541 aggttagtta cccagccgtc tgcaggcgca cgaatgacgg tacgctccag atcgagttta
      601 gccagatcgc gcgtcgcctg ggctttagcc aattgatgca gtaccgtctg caagacgttg
      661 ttcgcctgat cgatctcttc ccgggacatc gcctgtacgc cgaggcgatt acggcgaccg
      721 gcttcctggc gtttttcctg cgccagtacc tgataatagg ctacatcagc ttccgcttcc
      781 gccagcgctt tttgatagcg tggctgatcg atggtaaaca ggacctgatc ctttttcacc
      841 agttggttat catgcacgtt tacatgggta atcaggcccg cgacatccgg ggcaatagcg
      901 acgacatcgg cgctaaaacg cgcgtcgcgc gtccagggtg attcggtgta atacacccag
      961 gcgcggaaaa tggcgataaa ggccagaata accagtacga gggtaatggc cgtacgggag
     1021 agttttcttg ttagtgtttt cacttcaacc tcaaacgaac aggcgcgata ttaaataaaa
     1081 cagacaacaa tacagcgcgg tattgaacag agccggatgc cagacaaaat catagatgcc
     1141 cgtcggcaca agcatccgac gcaccagcca aaaaatagcc agtgacaaaa gcaattcgaa
     1201 aaatatcggt gggaaggaaa gaccaaacac cacgataacg ggaaacagac tcatgttgac
     1261 cttgatttct gagagagagc aggcgataga ttgttaagct acatcgccgc agagaagggc
     1321 aagagacgcc aggcgagagc gacatagctc ttattcgaat aatagtatat taacgtaatt
     1381 gttatgctgt tatctatatt atgtgatcta aatcactttt aagccagagt gaataatgga
     1441 acgattaaaa cgaatgtcgg tattcgccaa agttgttgag tttggctctt ttaccgccgc
     1501 agccagacag ctgcaaatga gcgtatcgtc catcagccag actgtggcga aactggaaga
     1561 tgagcttcag gttaaattgc tcaaccgcag cacacgcagc attgggctca ccgaagctgg
     1621 aaaaatctat tatcagggct gtcgtcgtat gctgcatgaa gtgcaggatg ttcacgagca
     1681 gctttacgct tttaataaca cgcctatcgg tacattgcgt atcggctgtt cttcaaccat
     1741 ggcgcaaaat gtgctggccg ggcttaccgc aaaattatta aaagagtatc ccggtctggc
     1801 ggtcaatctg gtgacaggaa ttccggcccc ggatttaatt gccgacgggc tggacgtggt
     1861 gatccgcgtg ggcgcgctgc aagactccag cctgttttcc cgtcgactcg gcgcgatgcc
     1921 gatggttgtg tgcgccgcca agccctacct cgctcagtac ggcgtcccgg aaaaacccgc
     1981 cgatctcagt agccattcct ggctggaata tagcgtgcgc ccggataatg agtttgaact
     2041 tattgcgccg gaaggaattt ctacccgact gattccacag gggcggttcg tcactaacga
     2101 tccgatgacg ctggtacgct ggctgaccgc cggaaccgga atcgcctatg tgccgctgat
     2161 gtgggtgatc gatgagatca atcgtggcga tctggagatc ctgctgcctc gctatcagtc
     2221 cgatccccgt ccggtgtacg cgctgtacac cgaaaaagat aagctgccgc ttaaagtgca
     2281 ggtagtgatt aacgcgttaa ctgactattt tgtcgatgtc gcacacctgt ttcaggggat
     2341 gcacgggcga gggaaagaaa aataaaaaca ccgggtaatt gctgaagacg attgtagatc
     2401 agatgccacc cgaggcagac attgcctgat ggcgctgcgc ttatcaggcc tgggcggcac
     2461 ataccacagg cctgataagg cggacagtta tgcggtgccg ccaaccgtca ggttatcgac
     2521 tttcagcgtc ggctggccta cgcctaccgg caggctttgg ccctctttac cgcagacccc
     2581 caccccgtta tccagcttaa ggtcgttgcc gaccatggag atctgttgca tcgtttcaat
     2641 gcctgatcca atcaacgtcg cgcccttcac cggcgtcgtg actttgccgt tttcaatcag
     2701 atacgcttcc gaggtagaga acacaaactt gccggaggtg atatccacct gaccgccgcc
     2761 aaagttaggc gcatagatgc catactcaac ggattcgata atttcctgcg gcgttgactg
     2821 ccccgccaac atataagtat tcgtcatacg cggcatcggc agatgcgcat aagattcgcg
     2881 acgcccgtta ccggtcggcg cagcgcccat caggcgcgcg ttcagcttgt cctgcatgta
     2941 tcctttcagc acgccatttt caatcaatac gttgtactgg cctggcgtac cttcatcatc
     3001 gatagcaacg gagccacgac ggttcatcat tgtgccgtca tccactacgg tgcaaagcgc
     3061 ggaggcaacc tgctcaccga tctgaccgct aaacacagac gtcccacgac ggttgaaatc
     3121 accttccagc ccgtgcccga ccgcttcgtg cagcaatacg cccggccacc cggcgcccag
     3181 aaccaccggt aacgtccccg ctggcgcagc gaccgcggag agattaacca gcgccat
//
LOCUS       DAGWFR010000289         3153 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.292, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000289 DAGWFR010000000
VERSION     DAGWFR010000289.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 3153)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3153)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3153
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.292"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..285)
                     /locus_tag="MOX77_004528"
     CDS             complement(<1..285)
                     /locus_tag="MOX77_004528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HCA3359899.1"
                     /translation="MKLYSFFNSSASYRVRIALALKGIDYQTVGVNIRIGQQNALAYR
                     RMNPVGLVPTLVTDDGESLGQSLAIVDWLDRHFPQTPLLPTSDPARSQALE"
     gene            complement(294..995)
                     /locus_tag="MOX77_004529"
     CDS             complement(294..995)
                     /locus_tag="MOX77_004529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HCA3359900.1"
                     /translation="MTKYVFQPQAPVTVPVAGSDEQFPVRRVYCVGRNYAAHAREMGF
                     DPDREPPFFFCKPADAVVPVAAGDTLELPYPAQTDNYHYEIELVVAIGKKGSDIPLEK
                     AHEYVWGYATGLDMTRRDRQMEMRQMGRPWEIGKAFDLSAPIAPLHKAAETHNVDNAP
                     IWLQVNGEDHQRSDIRHLIWSVNETISYLSGFFELQPGDLIFTGTPEGVGAVVKGDVI
                     TGNVEGLTPIAVKIV"
     gene            complement(1011..2048)
                     /gene="gtdA"
                     /locus_tag="MOX77_004530"
     CDS             complement(1011..2048)
                     /gene="gtdA"
                     /locus_tag="MOX77_004530"
                     /EC_number="1.13.11.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gentisate 1,2-dioxygenase"
                     /protein_id="HCA3359901.1"
                     /translation="MSEINQNVKDSRQQYYQHISGQNLTPLWESLHHLVPQTPNANCA
                     PAYWNYQEIRPLLMESGNVIGAKEAIRRVLVLENPALRGQSSITATLYAGLQLILPGE
                     VAPSHRHNQSALRFIVEGKGAFTAVDGERTPMHTGDFILTPQWRWHDHGNPGSEPVVW
                     LDGLDLPLVNLLGCGFAEDYPEDQQPVTRKEGDYLPRYAANMLPLRHQRGNSSPIFNY
                     RYDRSREALHDLTRMGDPDEWEGYKLRYVNPVTGGYPMPSMGAFLQLLPKGFASRVAR
                     STDSTIYHVVEGAGQVTIGNETFHFSAKDIFVAPTWHEVSFRSSEDTVLFSFSDKPVQ
                     EALGLFREARY"
     gene            complement(2060..>3153)
                     /locus_tag="MOX77_004531"
     CDS             complement(2060..>3153)
                     /locus_tag="MOX77_004531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aromatic acid/H+ symport family MFS transporter"
                     /protein_id="HCA3359902.1"
                     /translation="IELCVALFGALSLLSAFSPDIETLVLLRFLTGLGLGGAMPNTIT
                     MTSEYLPARRRGALVTLMFCGFTLGSAMGGIVSAQLVPLIGWHGILALGGILPLMLFF
                     GLLFALPESPRWQVRRQLPQAVVARTVSAITGERYHDTQFFLHETAAVAKGSIRQLFA
                     GRQLVITLMLWVVFFMSLLIIYLLSSWMPTLLNHRGIDLQQASWVTAAFQVGGTLGAL
                     LLGVLMDRLNPFRVLAVSYALGAVCIVMIGLSENGLWLMALAIFGTGIGISGSQVGLN
                     ALTATLYPTQSRATGVSWSNAIGRCGAIVGSLSGGMMMALNFSFDTLFFVIAIPAAIS
                     AVMLTLLTVVVRLSISVPDDLPRASVVNE"
BASE COUNT          739 a          955 c          835 g          624 t
ORIGIN      
        1 ttccagcgcc tggctgcgcg ccgggtcgct cgtcggcagc agcggcgttt gcggaaaatg
       61 tcggtccagc cagtcgacga tggccagcga ttgccccaac gattcgccgt catcagtgac
      121 tagcgtcggc accaggccta ccggattcat ccgtcggtag gccagcgcat tctgctggcc
      181 gatacgaata ttgacgccca ctgtctggta atcaatcccc tttaacgcca gcgcaatacg
      241 tacacgataa gacgccgaac tattaaagaa actgtacagc ttcatcgttc acctcagaca
      301 attttcacag caatcggcgt cagaccttct acgttcccgg tgatgacatc ccctttcacc
      361 actgcgccca ccccctctgg cgtaccggtg aaaatcaaat cgcctggctg caattcaaaa
      421 aagccggaca aatagctgat ggtttcattc accgaccaaa tcagatgacg aatatcgctg
      481 cgctgatggt cttcgccgtt aacctgtagc caaatagggg cgttatccac attatgcgtt
      541 tcagcggctt tgtgtaatgg cgcaatgggc gcggagagat cgaacgcttt gccaatttcc
      601 cacgggcgtc ccatctgacg catttccatc tgacgatcgc gacgcgtcat gtccagaccg
      661 gtggcgtatc cccagacata ttcatgggct ttttctagcg ggatatcgct ccccttttta
      721 ccaatcgcca ccaccagctc aatttcataa tggtagttat cggtctgcgc cggatacggc
      781 agttccaggg tatcccccgc cgctaccggg acgacagcgt ccgctggttt acaaaagaag
      841 aacggcggtt cgcgatcggg atcaaaaccc atttcacggg catgggcggc atagttgcga
      901 cccacgcagt aaacgcgacg taccggaaac tgctcatcac tgcccgccac gggtactgtc
      961 accggggcct gcggctggaa tacatatttg gtcatgttct ctctccctaa ttaataacgt
     1021 gcttcgcgga acagccccag ggcttcctga accggcttgt ccgaaaagct gaataacacc
     1081 gtgtcttcgc tgctgcgaaa cgacacctca tgccaggtcg gcgccacaaa aatgtctttt
     1141 gcggaaaaat gaaaagtttc gttgccgata gtgacctgcc ctgccccttc aacgacgtgg
     1201 tagatagtgc tgtcggtgct ccgcgccaca cgcgaggcaa agccttttgg cagcagttgc
     1261 aggaacgcgc ccatcgacgg catcggataa ccgccagtga cgggattaac gtaacgcagc
     1321 ttgtagcctt cccactcatc cggatcgccc atacgggtca gatcgtgcaa cgcctcgcga
     1381 ctgcggtcgt aacggtagtt gaaaatcggc gacgagttcc cgcgctggtg gcgcagcggc
     1441 agcatattcg ctgcatagcg cggcagataa tcgccctctt ttcgcgtcac cggctgctga
     1501 tcttcgggat agtcttccgc aaaaccacag cccaggagat tgactaacgg cagatccaga
     1561 ccatccagcc ataccaccgg ctctgatccc ggattaccat gatcgtgcca gcgccactgc
     1621 ggcgtcagga taaaatcgcc ggtatgcatt ggcgtgcgct cgccgtccac cgcggtaaat
     1681 gcgcctttac cttcgacgat aaaacgcagc gccgactggt tatggcgatg actcggcgcg
     1741 acttcgccgg gcaggatcag ctgtaaacca gcgtataagg tcgccgtgat cgacgactga
     1801 ccgcgcaatg ccggattttc cagcaccagc acccggcgga tcgcctcttt cgcgccaatg
     1861 acattgccgc tttccatcag tagcggacga atttcctgat aattccagta ggccggcgcg
     1921 cagttggcgt ttggcgtctg cggtaccagg tgatgtaacg attcccacag cggcgtcaga
     1981 ttctgcccgg aaatatgctg gtaatactgc tgacggctat cttttacgtt ctgatttatt
     2041 tcagacatgg agattctcct tattcgttta cgacgctggc acgcggcagg tcgtcaggta
     2101 cagaaatcga aaggcggaca accactgtca gcagggtaag cattaccgcg ctgatagccg
     2161 ccggaatagc aatgacaaaa aacaacgtat cgaaagagaa attgagggcc atcatcatgc
     2221 cgccggagag cgaaccgaca atcgccccgc agcgtccaat ggcgttcgac cagctcacgc
     2281 ccgtcgcccg gctttgggtg gggtacagcg tcgccgtcag agcattcagc ccgacctggg
     2341 aaccgctaat accgatgccg gtaccaaaaa tcgccagcgc catcagccaa aggccgtttt
     2401 cgctcaggcc tatcatgaca atgcaaactg cgcccagcgc atagctcacc gccagtaccc
     2461 ggaacgggtt aagccggtcc atcaacacgc cgagtaacag cgcgccaagc gtgccgccca
     2521 cctggaatgc ggcagtcacc cacgacgcct gttgcagatc aatacctcga tggttaagta
     2581 acgtcggcat ccagctggaa agcagataga taatgagcag gctcataaag aacaccaccc
     2641 ataacatcag ggtaatgaca agctgtcgcc cggcaaaaag ctggcgaata ctgcctttgg
     2701 cgacggctgc cgtctcatgc agaaagaatt gcgtatcgtg atagcgctcg ccggtaatgg
     2761 cgctgaccgt ccgggcgaca acggcttgcg gtagttggcg acgtacctgc cagcggggag
     2821 attccggcag cgcgaacagc aggccgaaaa acagcatcaa aggcaagatg ccgcctagcg
     2881 ccagaattcc gtgccagcca atcagcggca ccagttgcgc gctcacaatc ccgcccatcg
     2941 ccgaccccag ggtaaaaccg cagaacatca gcgtgaccag cgctccgcgt cgacgagcgg
     3001 gaaggtattc cgacgtcatg gtgatggtat tcggcatcgc tccgcccagt cccagaccgg
     3061 ttaagaagcg cagcaacacc agggtttcta tatccggcga gaaagcggaa agcaggctca
     3121 atgcgccgaa tagcgccacg caaagctcaa tga
//
LOCUS       DAGWFR010000290         3150 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.293, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000290 DAGWFR010000000
VERSION     DAGWFR010000290.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 3150)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3150)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3150
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.293"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..454
                     /gene="prfA"
                     /locus_tag="MOX77_004532"
     CDS             <1..454
                     /gene="prfA"
                     /locus_tag="MOX77_004532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012132158.1"
                     /note="recognizes the termination signals UAG and UAA
                     during protein translation a specificity which is
                     dependent on amino acid residues residing in loops of the
                     L-shaped tRNA-like molecule of RF1; this protein is
                     similar to release factor 2; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HCA3359903.1"
                     /translation="EAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIV
                     VECQDERSQHKNKAKALSVLGARIHAAETAKRQQAEASTRRNLLGSGDRSDRNRTYNF
                     PQGRVTDHRINLTLYRLDETMEGKLDMLIEPIVQEHQADLLAALSEQE"
     gene            454..1287
                     /gene="prmC"
                     /locus_tag="MOX77_004533"
     CDS             454..1287
                     /gene="prmC"
                     /locus_tag="MOX77_004533"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HCA3359904.1"
                     /translation="MDFQHWLHEAVNQLRDSDSPRRDAEILLEYVTGKRRTYIMAFGE
                     TPLTDVQQQQLAELLQRRKQGEPIAYLTGLREFWSLPLFVSPATLIPRPDTECLVEQA
                     LARLPVKTCRILDLGTGTGAIALALACERPDCEVTAVDRMPDAVALAIRNAEHLAIRN
                     VRILQSCWFSALSGQQFDMIVSNPPYIDAQDPHLSEGDVRFEPRSALVADENGMADLT
                     HIIDNARQMLTPGGFLLLEHGWRQGEAVRAAFRRSGYTDVETCRDYGGNERVACGRFT
                     P"
     gene            1284..1673
                     /locus_tag="MOX77_004534"
     CDS             1284..1673
                     /locus_tag="MOX77_004534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SirB family protein"
                     /protein_id="HCA3359905.1"
                     /translation="MTIAMLLTLHLICVALSVSLFVARYWWRYCGHALAAARWTRIVP
                     PVIDTLLLLSGIGLIVKTHILPFTESGSWLTEKLFGVIIYIVLGFIALDYRQARSQQA
                     RFIAFPLALVVLYIIIKLATTKIPLLG"
     gene            1677..2486
                     /locus_tag="MOX77_004535"
     CDS             1677..2486
                     /locus_tag="MOX77_004535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat-containing protein"
                     /protein_id="HCA3359906.1"
                     /translation="MRSLADFEFNNAPLCDGMILASEMIRLDFPTQFVYDELERLVSL
                     AQEEISQLLSQDEQLEKLLALFYGEWGFTDSRGVYRLSDALWLDKVLKKRQGSAVSLG
                     AILLWIANRLDLPLVPVIFPTQLILRIESLEGEMWLINPFNGETLDEHTLEVWLKGNI
                     SPVAELFNEDLDEADNAEVIRKLLDTLKSSLMEERQMELALRVSEALLQFNPEDPYEI
                     RDRGLIYAQLECEHVALTDLSYFVEQCPEDPISEMIRAQINTIAHKQIVLH"
     gene            2524..>3150
                     /gene="kdsA"
                     /locus_tag="MOX77_004536"
     CDS             2524..>3150
                     /gene="kdsA"
                     /locus_tag="MOX77_004536"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HCA3359907.1"
                     /translation="MKQKVVNIGDIKVANDLPFVLFGGMNVLESRDLAMRICEHYVTV
                     TQKLGIPYVFKASFDKANRSSIHSYRGPGLEEGMKIFQELKQTFGVKVITDVHEASQA
                     QPVADVVDVIQLPAFLARQTDLVEAMAKTGAVINVKKPQFVSPGQMGNIVDKFHEGGN
                     DKVILCDRGANFGYDNLVVDMLGFSVMKKVSGNSPVIFDVTHALQCRDP"
BASE COUNT          701 a          789 c          903 g          757 t
ORIGIN      
        1 ggaagccgag ctgccggata ttaacccggc ggatctgcgc attgatacgt ttcgttcttc
       61 cggcgcgggc ggtcagcacg ttaacaccac cgactccgct atccgtatta cccacttgcc
      121 gaccggcatc gtggtggaat gccaggacga gcgttcgcag cataaaaaca aagcgaaagc
      181 gctctcggtg ctcggggcgc gcattcacgc cgccgaaacg gcaaaacgcc agcaggccga
      241 ggcgtcaacg cgccgcaacc tgcttggcag cggcgatcgc agcgatcgta accggaccta
      301 taatttcccg caggggcgcg tgaccgatca tcgtattaat ctgacgttat atcgccttga
      361 tgaaacgatg gaaggtaagc tggatatgct gattgagccg attgttcagg aacaccaggc
      421 tgacctgtta gccgcgttgt ccgagcagga ataatggatt ttcagcactg gctacatgag
      481 gcggtaaacc agctccggga cagcgacagc ccccggcgcg acgccgagat cctgcttgag
      541 tacgttacgg gcaagaggcg gacgtatatc atggcctttg gcgaaacgcc gcttaccgat
      601 gtccagcaac aacagctcgc ggagctgctg cagcggcgta aacagggcga acccattgcg
      661 tacctgacgg gcttacgcga attttggtcg ctgccgctct tcgtttctcc cgccacgcta
      721 atcccgcgcc cggataccga atgtctggtt gaacaggcgt tggcgcgatt gccggtcaaa
      781 acctgtcgta ttctggattt aggcaccgga accggcgcga ttgcgctggc gctggcctgc
      841 gagcgaccgg attgcgaggt gactgcggtc gatcgtatgc ctgatgcggt tgcgctggcg
      901 atacgcaacg cggaacattt ggctatccgg aatgtgcgta tactgcaaag ttgttggttc
      961 agcgcactat cggggcagca gttcgacatg attgtcagca atccgcccta cattgacgcg
     1021 caggacccgc accttagcga aggcgatgta cgctttgaac cgcgctcagc gttggtggcg
     1081 gacgaaaacg gtatggcgga tcttacgcat attatcgata atgcccgcca gatgttaacg
     1141 cccggcggct tcctgctgct ggaacacggt tggcggcagg gcgaagcggt aagagcggct
     1201 ttcaggcggt ctggttacac ggatgtagaa acgtgtcgtg attatggtgg caatgaacgc
     1261 gtggcctgcg ggcgttttac gccatgacaa ttgcaatgtt gctcacgctt catcttattt
     1321 gtgttgcgct ctccgtcagt ttgtttgtcg ctcgttactg gtggcgctat tgcggccatg
     1381 cgttggccgc cgcgcgctgg acacgaatcg tgcctcccgt catagatacc ctgttactgc
     1441 ttagcggtat tgggttaatc gttaaaacgc acatcctgcc attcacggag tcgggctcat
     1501 ggctgactga aaaactgttt ggcgttatca tctacatcgt tttgggtttt attgcgcttg
     1561 attatcgtca ggcgcgcagc cagcaggcgc gttttatcgc tttcccgctg gcgctggtgg
     1621 tgctgtacat catcattaaa ctcgccacca caaaaatacc gttactgggg taagtcatga
     1681 ggtcgttagc tgatttcgaa tttaacaatg cgccgctgtg tgatggcatg atcctggcat
     1741 cagagatgat tcgcctggat tttcccacgc agtttgtcta cgacgaactg gaacgtctgg
     1801 tcagtctggc gcaggaagaa attagccagc tcctgtctca ggatgagcaa ctggaaaaat
     1861 tgctggcact tttttacggc gagtgggggt tcacggattc ccgcggcgtc taccgtcttt
     1921 ctgatgcttt atggctcgat aaagtcctga aaaaacgcca ggggagcgct gtatcgttgg
     1981 gcgctatttt attatggata gcaaaccgtc ttgatttgcc gttggtgccc gttatcttcc
     2041 caacgcagct gattttgcgt attgaatcgc tggaaggaga aatgtggctg attaacccgt
     2101 tcaacggtga aacgcttgat gaacataccc tcgaagtctg gttaaaaggc aatattagtc
     2161 cggtcgccga gttgtttaac gaagatttgg acgaagcgga taacgccgaa gtgattcgta
     2221 agctactgga tacgctgaaa tcctcgctga tggaggaacg gcaaatggag ctggcgctgc
     2281 gcgttagcga agcattgttg caatttaacc cggaagatcc ttacgaaatc cgtgaccgcg
     2341 ggttgatcta cgcgcagctt gagtgtgaac acgttgcgct gactgattta agctacttcg
     2401 ttgaacagtg tccggaagac ccgatcagcg aaatgattcg tgcgcagatc aacaccattg
     2461 cgcacaagca aattgttcta cattaattaa ccgacatttt acctataagt gtaaggcgat
     2521 cctatgaaac aaaaagtggt taacattggc gacattaagg tggcaaatga cctgccgttt
     2581 gtgctgtttg gcggtatgaa cgtgctggag tcacgcgatc tggcaatgcg catttgtgag
     2641 cactacgtaa ccgttaccca gaagctgggt attccttacg tgttcaaggc ctcttttgat
     2701 aaagccaacc gttcctctat tcactcttac cgtgggccgg gtctggaaga agggatgaaa
     2761 atcttccagg aactcaaaca gacatttggc gtaaaagtga tcactgacgt ccatgaagcc
     2821 agccaggcgc agcctgtggc tgatgtggtt gacgtgattc agctcccggc gtttttggcg
     2881 cgccagaccg acctggtgga agcgatggcg aaaaccggcg ctgtgattaa cgtgaaaaag
     2941 ccgcagtttg taagcccggg tcagatgggc aatatcgtgg ataagttcca tgagggcggt
     3001 aacgataagg tgattctgtg cgatcgcggc gcgaacttcg gttatgacaa cctggtggtg
     3061 gatatgctgg gctttagcgt gatgaaaaag gtctccggca actcgccggt gattttcgac
     3121 gttacccatg cgctgcaatg ccgcgaccca
//
LOCUS       DAGWFR010000291         3134 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.294, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000291 DAGWFR010000000
VERSION     DAGWFR010000291.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 3134)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3134)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3134
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.294"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..443)
                     /gene="mreB"
                     /locus_tag="MOX77_004537"
     CDS             complement(<1..443)
                     /gene="mreB"
                     /locus_tag="MOX77_004537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000913396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreB"
                     /protein_id="HCA3359908.1"
                     /translation="MLKKFRGMFSNDLSIDLGTANTLIYVKGQGIVLNEPSVVAIRQD
                     RAGSPKSVAAVGHDAKQMLGRTPGNIAAIRPMKDGVIADFFVTEKMLQHFIKQVHSNS
                     FMRPSPRVLVCVPVGATQVERRAIRESAQGAGAREVFLIEEPMAAA"
     gene            complement(751..2691)
                     /gene="csrD"
                     /locus_tag="MOX77_004538"
     CDS             complement(751..2691)
                     /gene="csrD"
                     /locus_tag="MOX77_004538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNase E specificity factor CsrD"
                     /protein_id="HCA3359909.1"
                     /translation="MRLTTKFSAFITLLTGLTIFVTLIGCSLSFYNAVQYKYVSRVQA
                     TATAIDTHLVTHDIVSLTPQIDELMIASDIVRVDLLQGERSVYSHSRARGYRPAGTSD
                     MYRELVVPLIKHPGMSLRLVYQDPMGNYFHSLITTAPLTLAIGFIVLILFLSVRWLQR
                     QLSGQELLEIRSTRILNGERGANVRGSVYEWPARTSSALDVLLSEIQFAHEQRSRLDT
                     LIRSYAAQDTKTGLGNRLFFDNQLATLLEDQEKVGVHGVVMMIRLPDFNLLRDSLGGN
                     QAEEQMFMLINLLSTFIMRYPGSLLARYHRSDFAVLLPHRTLKEAESIAGQLLKAVDA
                     LPANKMLDRDDMVHIGICAWRSGQSTDQVMEHAEAAARNAALQGGNSWAIYDDTLPEK
                     GRGNVRWRTLIEQMLNRGGPRLYQKPAVTREGRVHHRELMCRIYDGKEEVSSAEYMPM
                     VLQFGLSEEYDRLQISRLITLLGYWPDENLAMQLTVESLIRPRFQRWLRDTLMQCEKS
                     QRNRIIIELAEADVCQHISRLQPILRLVNALGVRVAVTQAGLTLVSTSWIKALNVELL
                     KLHPSLVRNIEKRTENQLLVQSLVEACAGTPTQVYATGVRSRGEWQTLTKRGVVGGQG
                     DFFASSQLLDTNVKKYSQRYSV"
     gene            2895..>3134
                     /locus_tag="MOX77_004539"
     CDS             2895..>3134
                     /locus_tag="MOX77_004539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HCA3359910.1"
                     /translation="MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDA
                     LAITGKGKIIRHFPMIPGIDFAGTVHASEDPRFHAG"
BASE COUNT          773 a          867 c          771 g          723 t
ORIGIN      
        1 gcggccgcca tcggctcttc gatcaaaaag acttcacggg cgcctgcgcc ctgagcggat
       61 tcacgaatcg cgcggcgttc tacctgcgtc gcgccgaccg gcacgcatac cagtacgcgc
      121 gggcttgggc gcataaagct gttgctgtgc acttgtttaa taaagtgctg gagcattttt
      181 tcggtcacaa agaagtcagc gataacgcca tctttcatcg gacggatcgc agcgatattg
      241 cccggcgtac ggcccagcat ctgcttcgca tcatgaccga ctgcagccac gcttttcggc
      301 gaaccggcac gatcctgacg aatggccaca acggaaggct cattcaatac gatgccttgt
      361 ccttttacat aaatgagggt attcgcggta cccaggtcaa tggacaggtc attggaaaac
      421 atgccacgaa attttttcaa catactaagg gataatcctg aaagctgggg cggaaaacaa
      481 aatccgctta ctttaccaac cacacgcagc agcgacaagg cgcaaaaatc atctgctacg
      541 gtgaaaatta gtgcagttcg tttcctttgt tacaaatctc ggcctgagtc cctcagggct
      601 gaaaaaatca gcagcaatcc tcgccttcgt ttgcaacctg tcaaaggtca ttcacctgca
      661 tatttgctgc aacaatctgg cgagcagaca agcacacccc catgaggcgc agcgcgcgtt
      721 attctacgtg aaaacaaatt aaacggcagg ttaaaccgag tatctttgcg aatatttttt
      781 cacgtttgtg tcaagtagtt gggaggaggc aaaaaaatca ccctgcccgc caaccacgcc
      841 gcgttttgtc agcgtctgcc actcgccgcg cgaacggacg cccgtcgcgt aaacctgcgt
      901 aggcgtgccc gcgcaggcct ctaccagact ttgaaccaga agctggtttt ccgttcgctt
      961 ctcaatgttt ctgaccagac tcggatgcag cttgagtaat tccacattga gcgctttaat
     1021 ccagctcgtg ctaaccagcg tcaaacccgc ctgtgtcacc gccacccgaa cgccaagcgc
     1081 attgactaag cgaaggatgg gttgtaaccg gctgatgtgt tgacaaacat ctgcctccgc
     1141 aagttcaata attatgcgat ttcgctgtga tttttcacac tgcattaacg tatcgcgcaa
     1201 ccagcgctga aaacgcggac gaatcagcga ctcaaccgtc aactgcattg ccagattttc
     1261 atccggccag tagcccagca acgtaatcag gcggctaatt tgtaatctgt catactcttc
     1321 cgataaacca aattgcaaca ccatcggcat atactccgcc gagctcacct cttctttacc
     1381 gtcatagatg cgacacatca attcccgatg atgtacgcga ccttctcgcg tgaccgccgg
     1441 tttttgataa agtcgcggtc cgccccggtt cagcatctgc tcaatcaatg tgcgccagcg
     1501 cacattgccg cgcccttttt ccggcagagt gtcgtcgtag atagcccagc tatttccccc
     1561 ctgcagggcg gcattccgcg ccgcggcttc agcatgttcc atcacctgat cggtggactg
     1621 tccgctgcgc caggcgcaaa tgccgatatg taccatatcg tcacgatcga gcattttgtt
     1681 agccggtagc gcatcgacag cttttaaaag ttgtccggca atactttccg cttctttcag
     1741 cgttcgatgc ggtagcagca cggcaaagtc gctgcggtga taacgcgcca gcagcgagcc
     1801 tgggtaacgc ataatgaatg tcgatagcag attgataagc ataaacatct gctcttccgc
     1861 ctgattgcct cccaggctgt cgcgcagaag attgaagtct ggcaagcgga tcatcatcac
     1921 cacgccatgc actcccactt tttcctgatc ttccagcagc gtcgccagct ggttatcaaa
     1981 gaacagacgg ttaccgagtc cggttttggt gtcctgcgcg gcgtaggagc gaatgagggt
     2041 gtccaggcga ctacgctgtt cgtgagcaaa ctgaatttcg gaaagcaata catcaagcgc
     2101 gctactggtg cgcgctggcc attcgtaaac agaaccgcgg acattcgccc cgcgttcgcc
     2161 gttcagaata cgcgttgagc gaatttccag aagctcctgc ccggaaagct gccgctgcag
     2221 ccagcgcacc gataaaaaca aaatcagaac gataaaaccg atcgccagcg tcagcggcgc
     2281 cgtggtgatc agtgagtgaa aataattacc catcgggtcc tgataaacca gacgtagcga
     2341 cattcctgga tgttttatca gcggtacgac cagctcgcga tacatgtcgc tggtgccggc
     2401 tggccgataa cctctggcgc gagaatggct gtagacgctg cgctccccct gcaacagatc
     2461 gacacgcaca atatcggaag cgatcatgag ctcgtcgatt tgcggcgtca gcgagacaat
     2521 atcatgggtc accaggtgcg tatcaatggc tgttgccgtc gcctgcacac ggctgacata
     2581 cttatactgt acggcgttat aaaagcttag cgagcaacct atcagagtca cgaagatcgt
     2641 taatcccgtg agcagcgtga taaaagctga gaatttcgtc gttaatcgca tccttgagtt
     2701 aactccgacg gttataaaca gtatgaaaaa gcgaatctga aggcggaatt cgccacggcg
     2761 cgcaatgaag caggcatact accaaaatgg atctatctgg caatttattg cgttgcatcg
     2821 gcatcacgtt ttaattagcg agtatagtct tcgtagctat ttttccaatc taccatgtaa
     2881 agtgaggaca ggttatgcag gcgttgatct tagaacagca ggacggtaaa accctcgcat
     2941 ccgtgcaaca tctcgaagag agtcaactgc cggcaggtga tgtgacggtg gatgtccact
     3001 ggtccagcct gaattataaa gatgctctgg ctatcaccgg aaaagggaaa attatccgtc
     3061 attttccgat gattcctggt attgatttcg ccggcaccgt tcacgcaagc gaagatcctc
     3121 gctttcatgc aggc
//
LOCUS       DAGWFR010000292         3104 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.295, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000292 DAGWFR010000000
VERSION     DAGWFR010000292.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 3104)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3104)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3104
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.295"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..1175
                     /gene="ptsP"
                     /locus_tag="MOX77_004540"
     CDS             <1..1175
                     /gene="ptsP"
                     /locus_tag="MOX77_004540"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HCA3359911.1"
                     /translation="IMVRALGIPTVMGADIQPSVLHRRTLVVDGYRGELLVDPEPVLI
                     QEYQRLISEEIELSRLAEDDVNLPAQLKSGERIKVMLNAGLSPEHEEKLGSRIDGIGL
                     YRTEIPFMLQSGFPSEEEQVAQYQGMLQMFNDKPVTLRTLDVGADKQLPYMPISEENP
                     CLGWRGIRITLDQPEIFLIQVRAMLRANAATGNLSILLPMVTSIDEVDEARRLIERAG
                     REVEEMIGYAIPKPRIGIMLEVPSMVFMLPHLANRIDFISVGTNDLTQYILAVDRNNT
                     RVASIYDSLHPAMLRALSMIAQEAEKHGLDLRLCGEMAGDPMCVAILIGLGYRHLSMN
                     GRSVARVKYLLRHIDFEDAQTLARRSLEAQMATEVRHQVAAFMERRGMGGLIRGGL"
     gene            1388..2263
                     /gene="lgt"
                     /locus_tag="MOX77_004541"
     CDS             1388..2263
                     /gene="lgt"
                     /locus_tag="MOX77_004541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HCA3359912.1"
                     /translation="MTSSYLHFPDFDPVIFSIGPVALHWYGLMYLVGFVFAMWLAVRR
                     ANRPGSGWTKNEVENLLYAGFLGVFLGGRIGYVLFYNFPLFLDNPLYLFRVWDGGMSF
                     HGGLIGVILVMIIFARRTKRSFFQVSDFIAPLIPFGLGAGRLGNFINGELWGRVDPDF
                     RFAMLFPGSRAEDIALLPSHPQWQPIFDTYGVLPRHPSQLYELALEGVVLFIILNLFI
                     RKPRPMGAVSGLFLIGYGAFRIIVEFFRQPDAQFTGAWVQYISMGQILSIPMIIAGAI
                     MMVWAYRRRPQQHVS"
     gene            2270..3064
                     /gene="thyA"
                     /locus_tag="MOX77_004542"
     CDS             2270..3064
                     /gene="thyA"
                     /locus_tag="MOX77_004542"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HCA3359913.1"
                     /translation="MKQYLELIQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLLEGFPL
                     VTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWP
                     TPDGRHIDQIATVLSQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLS
                     CQLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHL
                     QLSREPRALPKLVIKRKPDSLFDYRFDDFEIEGYDPHPGIKAPVAI"
BASE COUNT          652 a          798 c          876 g          778 t
ORIGIN      
        1 cgattatggt gcgcgcgctc ggtatcccca ccgtcatggg cgcggatatc cagccttcgg
       61 tgctacatcg ccgtacgttg gtggtggatg gctatcgcgg tgaattactg gtcgatcctg
      121 aacccgtgct tattcaggaa tatcagcggc tcattagtga agagatagaa ctcagtcgtc
      181 tggcggagga cgacgtcaat cttcccgccc aactgaaaag cggcgagcgt atcaaagtga
      241 tgctgaatgc cgggctcagc cccgagcatg aggaaaagtt aggcagtcgg atcgacggta
      301 tcggcctgta ccgtactgaa attcccttca tgctgcaaag cgggtttccc tcggaagaag
      361 agcaggtggc gcagtatcaa gggatgctgc aaatgtttaa cgataaaccg gtgacgctgc
      421 ggaccctgga tgtgggagcg gataagcaac tgccctatat gccgatcagc gaggagaacc
      481 cgtgtctggg ctggcgcggg atccgcatta cgctggatca gccggagatc tttttgatcc
      541 aggtccgcgc gatgctgcgt gccaatgcgg cgactggcaa cctcagcatt ttgttgccga
      601 tggtcaccag tattgatgaa gtcgatgaag cgcggcgtct gatcgaacgc gccgggcgcg
      661 aggtcgagga gatgatcggc tatgcgatcc cgaaaccgcg tatcggcatt atgctggaag
      721 taccatcaat ggtatttatg ctgccgcatc tggctaaccg gatcgacttt atctcggtcg
      781 gcaccaacga tttaacgcaa tatatcctgg cggtagatcg caacaatacc cgcgtggcca
      841 gtatttatga cagtttgcat ccggctatgc tgcgcgcact gtccatgatc gcgcaggaag
      901 ccgaaaaaca tggtctcgat cttcgcttgt gcggcgagat ggcgggcgat ccgatgtgcg
      961 tggcgattct tatcggtctg ggatatcgcc atctttcgat gaatggccgt tcggtagcgc
     1021 gtgtgaaata tctgctgcgg catatcgatt ttgaagacgc gcaaaccctt gccagacgca
     1081 gccttgaggc gcagatggcg accgaagtgc gtcatcaggt ggcggcgttt atggagcgcc
     1141 gcgggatggg gggattgatt cgcggagggt tgtaacgact ggagcgggaa aaagtgactg
     1201 tggattcacg gcgcagacaa cacgcctgca agatgaaaga caatgcgtat acatatcttt
     1261 taacggtaat cggcatctcg cttttaaccc ttgtgctatt attcgcacct ttggagcgtc
     1321 tgcaacgcgc aggcgcgctt atcaatcgct atctcttcag cgaaataaca agaaattgtg
     1381 gtgacagatg accagtagct atctgcattt tccggacttt gatccggtca ttttctcaat
     1441 tgggcccgtc gcgcttcact ggtatggctt gatgtatctg gtggggttcg ttttcgcgat
     1501 gtggttggcg gtgcgtcgcg ctaaccgtcc gggaagcggt tggaccaaaa acgaagttga
     1561 aaatttactc tatgcaggtt tcctgggggt cttcctgggg ggacgtattg gctatgtcct
     1621 gttttataac ttccctctgt ttctggataa cccgctctat ttattccgcg tctgggacgg
     1681 cggcatgtcc ttccacggcg ggcttatcgg cgtgatactg gtgatgatta tcttcgccag
     1741 gcgcacgaag cgctcgttct ttcaggtgtc tgattttatt gcgccgttaa ttccgttcgg
     1801 cctgggcgcc gggcgtctgg gcaactttat caacggtgaa ttgtgggggc gcgtcgatcc
     1861 tgacttccgg tttgccatgc tctttcctgg ctcacgcgcg gaagatattg cgctgctgcc
     1921 gtcacatccg caatggcagc ctatttttga tacctacggc gtattgccac gccacccttc
     1981 ccagttgtat gagctggcat tagaaggcgt ggtgctgttt atcatcctta atctctttat
     2041 tcgcaaaccg cgtccgatgg gcgcagtctc cggattattc ctgattggct atggcgcgtt
     2101 tcgtatcatt gttgaattct tccgccagcc ggacgcgcaa tttaccggcg cgtgggtaca
     2161 gtacatcagc atggggcaga ttctctctat cccgatgatt atcgctggcg cgatcatgat
     2221 ggtttgggca tatcgccgcc gcccgcagca acacgtttcc tgaggaacca tgaaacagta
     2281 tttagaactg atacaaaaag tgctggatga aggcacacag aaaaacgacc gtaccggcac
     2341 cggcacgctt tccatttttg gccatcagat gcgttttaac ctgctggaag gctttcctct
     2401 ggtgacgacg aaacgctgcc atttacgttc aattattcac gaactgctat ggtttttgca
     2461 gggcgatacc aacatcgctt acctacacga aaataatgtc accatctggg acgaatgggc
     2521 cgatgagaac ggcgatttag gcccggttta tggtaagcag tggcgtgcat ggccaacacc
     2581 ggatggccgc catatcgatc agatcgccac ggtcttgagc cagcttaaaa acgacccgga
     2641 ctctcgtcgt attatcgttt ctgcgtggaa cgtcggcgag ctggataaga tggcgctggc
     2701 gccgtgtcac gcctttttcc agttttatgt cgcagatgga aaactctcct gtcagcttta
     2761 tcagcgctcc tgcgatgtgt tcctcggtct gccgttcaac attgccagct acgcgttact
     2821 ggtgcatatg atggcgcaac agtgcgacct ggacgtcggc gattttgtct ggaccggcgg
     2881 cgacacgcac ctgtacagca accatatgga gcagacgcac ctgcaattaa gccgtgaacc
     2941 gcgcgcgctg ccgaaattgg tcattaagcg taaacccgat tcgctttttg actaccggtt
     3001 cgatgatttc gaaattgaag gctatgatcc gcaccccggt attaaagcgc cggtcgctat
     3061 ctaagcgctg acgatcctgc cataaccgac gccatcgcgc gtcg
//
LOCUS       DAGWFR010000293         3100 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.296, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000293 DAGWFR010000000
VERSION     DAGWFR010000293.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 3100)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3100)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3100
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.296"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..1512)
                     /gene="katG"
                     /locus_tag="MOX77_004543"
     CDS             complement(<1..1512)
                     /gene="katG"
                     /locus_tag="MOX77_004543"
                     /EC_number="1.11.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase/peroxidase HPI"
                     /protein_id="HCA3359914.1"
                     /translation="MSTTDDTHNTLSTGKCPFHQGGHDRSAGAGTASRDWWPNQLRVD
                     LLNQHSNRSNPLGEDFDYRKEFSKLDYSALKGDLKALLTDSQPWWPADWGSYVGLFIR
                     MAWHGAGTYRSIDGRGGAGRGQQRFAPLNSWPDNVSLDKARRLLWPIKQKYGQKISWA
                     DLFILAGNVALENSGFRTFGFGAGREDVWEPDLDVNWGDEKAWLTHRHPEALAKAPLG
                     ATEMGLIYVNPEGPDHSGEPLSAAAAIRATFGNMGMNDEETVALIAGGHTLGKTHGAA
                     AASHVGADPEAAPIEAQGLGWASSYGSGVGADAITSGLEVVWTQTPTQWSNYFFENLF
                     KYEWVQTRSPAGAIQFEAVDAPDIIPDPFDPSKKRKPTMLVTDLTLRFDPEFEKISRR
                     FLNDPQAFNEAFARAWFKLTHRDMGPKARYIGPEVPKEDLIWQDPLPQPLYQPTQEDI
                     INLKAAIAASGLSISEMVSVAWASASTFRGGDKRGGANGARLALAPQRDWEVNA"
     gene            complement(1677..2567)
                     /gene="metF"
                     /locus_tag="MOX77_004544"
     CDS             complement(1677..2567)
                     /gene="metF"
                     /locus_tag="MOX77_004544"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HCA3359915.1"
                     /translation="MSFFHANQREALNQSLAEVQGQINVSFEFFPPRTSEMEQTLWNS
                     IDRLSSLKPKFVSVTYGANSGERDRTHSVIKGIKERTGLEAAPHLTCIDATRDELRTI
                     ARDYWNNGIRHIVALRGDLPPGSGKPEMYAADLVGLLKEVADFDISVAAYPEVHPEAK
                     SAQADLLNLKRKVDAGANRAITQFFFDVESYLRFRDRCVSAGIDVEIIPGILPVSNFK
                     QAKKFADMTNVRIPSWMSLMFEGLDDDAETRKLVGANIAMDMVKILSREGVKDFHFYT
                     LNRAEMSYAICHTLGVRPGL"
     gene            2846..>3100
                     /locus_tag="MOX77_004545"
     CDS             2846..>3100
                     /locus_tag="MOX77_004545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001090461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HCA3359916.1"
                     /translation="MNTANFESIHIMIDAQAWRNLPLHLRLYHAFRQLVISGALADGA
                     KLPSARALAQRLHLSRDTVENAYSQLQRDGFMTRRQGAGSF"
BASE COUNT          727 a          868 c          799 g          706 t
ORIGIN      
        1 ggcgttgacc tcccagtcgc gctgaggcgc taatgccaga cgcgcgccgt tagcgccgcc
       61 acgcttatcg ccgccgcgga aagtagacgc ggatgcccag gcaaccgaaa ccatctcgct
      121 aatagaaagc ccggatgcag cgatcgccgc tttcaggttg ataatgtctt cctgcgttgg
      181 ctggtagagc ggttgcggca acgggtcctg ccagatcaga tcttctttcg gcacttccgg
      241 tccgatgtaa cgcgcttttg gtcccatatc tctgtgcgtc agtttgaacc aggcacgagc
      301 aaaggcttca ttaaaggcct gtggatcgtt aaggaaacga cgggaaatct tctcgaactc
      361 cggatcaaaa cgcagcgtca ggtcggtgac cagcatggtt ggcttacgtt ttttcgacgg
      421 atcgaacggg tccgggatga tatccggcgc gtctaccgct tcaaactgga tagcgccagc
      481 cggactacgg gtttgtaccc actcatattt gaacaggttc tcgaagaaat agttgctcca
      541 ctgggtcggc gtctgcgtcc agaccacttc cagcccggag gtaatagcat ccgcgccaac
      601 gccgctacca tagctgctgg cccaacctaa gccctgcgct tcaatcggcg cggcttccgg
      661 atcggcccct acatgggatg ctgctgccgc gccgtgggtt ttaccgaggg tatgcccgcc
      721 agcgatcaac gccacggtct cttcgtcgtt catccccata ttgccaaagg tagcgcgaat
      781 agcggcggcg gcagaaagtg gttcgccgct gtgatccggc ccctccgggt taacgtagat
      841 aaggcccatc tcggtcgcgc ccagcggcgc ttttgccagc gcttcagggt gtcggtgagt
      901 caaccaggct ttttcatcgc cccagttcac atccagatcc ggttcccaga catcttcacg
      961 cccggcgccg aaaccgaagg tacggaagcc ggagttttcc agcgccacgt tacccgccag
     1021 aataaacagg tcggcccagg aaattttctg gccatatttc tgcttaatcg gccacaacaa
     1081 acgacgcgcc ttatccaggc tgacgttatc cggccaggag ttaagcggcg caaaacgctg
     1141 ttgaccacga cccgcgccgc cacgaccatc aatagaacgg taggtgccag cgccatgcca
     1201 ggccatacga ataaacaaac cgacatagct gccccagtcg gcgggccacc acggttgtga
     1261 atcggtcagc agcgccttga gatccccttt cagggcggag tagtctaact tgctaaactc
     1321 tttgcggtag tcaaagtctt cgcccagcgg gttagaacgg ttggaatgtt gattcaaaag
     1381 atccacacga agctggttcg gccaccagtc gcggctggca gtccctgcgc ctgcgcttcg
     1441 gtcatgcccc ccctgatgga aaggacattt tccagtggat aacgtgttat gggtatcgtc
     1501 ggtcgtgctc atatctcagc tcccttttaa agtgttaccg ttacgatata caccaggagc
     1561 aaatagatat agttgaatta atccacagat tcgatagcta atacctttta tatttttagt
     1621 tacagagatg tagatcaata tgagttgtaa taaagctccc ggcagggagc tggaggttat
     1681 aaacccggtc ttacgcccag cgtgtggcaa atggcataac tcatttccgc acgattcaac
     1741 gtgtagaagt ggaaatcctt cactccttcg cggcttaaaa ttttcaccat gtccatcgca
     1801 atgttagcgc ccaccagctt gcgggtttct gcgtcatcat ccagcccctc aaacatcagc
     1861 gacatccagg acggaatgcg gacattggtc atatcggcaa attttttcgc ctgtttaaag
     1921 ttagacaccg gtaaaatgcc gggaataatt tctacgtcga taccggcgga aacacagcgg
     1981 tcgcgaaaac gcagatagct ttccacatcg aagaaaaatt gggttatcgc gcggttagcg
     2041 ccagcatcca ctttacgctt cagattaagc agatcggcct gcgcgctttt cgcttccgga
     2101 tgtacctccg gataggccgc tactgaaata tcgaaatcgg ccacctcttt gagcaaacca
     2161 accagatcgg cggcgtacat ctccggctta ccgctgcccg gcggcaaatc gccgcgcaaa
     2221 gcaacaatgt ggcggatacc gttattccag tagtcgcggg cgatggtgcg cagttcatcg
     2281 cgcgtggcgt caatacaggt aaggtgcggc gcggcctcaa gcccagtacg ctctttaatg
     2341 cctttaataa cactatgagt gcggtcacgt tccccggagt tggcgccata cgttaccgaa
     2401 acaaacttcg gtttcaggct gctcaggcga tcgatggagt tccacagggt ttgctccatt
     2461 tcactggtgc gcggcgggaa aaattcaaac gaaacgttaa tctgaccctg tacttccgcc
     2521 aggctctgat tcagggcttc ccgctggttg gcgtgaaaaa agctcatacc ttacctcatc
     2581 aatcgcatgt tattatttgt tgtgctgtaa acatctatcc gtttagacgt ccagatgtaa
     2641 aaatgacgga aaagcggaag gacgtcaact gaaaaatcac gccaaagaat gaggaatatt
     2701 cagcaaagtt gaaaaaactt cattctccat catcttgagc aataccttct tcatacggtt
     2761 ccgggtgttc ttcaacacat aaaaaataag gcgtaaatga tatgattcaa cgactttggc
     2821 gacgcaggga cgggggaacc agaagatgaa cacagcgaat ttcgagtcga tacatatcat
     2881 gatcgacgcg caagcgtggc gcaatctacc gctgcatctg cgcctgtacc acgcttttcg
     2941 ccaattggta atttccggtg cgttggctga tggcgcaaag ctaccttccg ctcgcgcgct
     3001 ggcccagcgg ctgcaccttt ccagggatac cgtcgaaaat gcctattccc agcttcagcg
     3061 cgacggcttt atgacccgca ggcaaggggc cgggagtttc
//
LOCUS       DAGWFR010000294         3053 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.297, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000294 DAGWFR010000000
VERSION     DAGWFR010000294.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 3053)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3053)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3053
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.297"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..1011
                     /gene="nrfA"
                     /locus_tag="MOX77_004546"
     CDS             <1..1011
                     /gene="nrfA"
                     /locus_tag="MOX77_004546"
                     /EC_number="1.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-forming cytochrome c nitrite reductase"
                     /protein_id="HCA3359917.1"
                     /translation="FHGKWARGGPEIVNDLGCADCHNTASDDFAQGKPAITLSRPYAE
                     RAMEAIGKPFDKAGRFDQQSMVCGQCHVEYYFDGKNKAVKFPWDEGMKVENMEQYYDA
                     IAFSDWTNSLSKTPMLKAQHPEYETWSAGIHGKNNVTCIDCHMPKVQNAEGKLYTDHK
                     IGNPFDNFAQTCANCHTQDKASLQKVVAERKQAIHDLKIKVEDQLVHAHFEAKAAWDA
                     GATDAEMKPILNDIRHAQWRWDLAIASHGIHMHAPEEGLRMLGSAMDKAADARTKLAR
                     LLATKGITHEIPLPDISTKEKAQKAIGLNMQQINAEKQDFLKTVVPQWEDQARKNGLL
                     SQ"
     gene            1123..1689
                     /gene="nrfB"
                     /locus_tag="MOX77_004547"
     CDS             1123..1689
                     /gene="nrfB"
                     /locus_tag="MOX77_004547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418495.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase pentaheme
                     subunit"
                     /protein_id="HCA3359918.1"
                     /translation="MSVLRSLLTAGVLASGLFWSLSGITATPTPQESDQRWTVTQQRN
                     PDAACLDCHKPDTEGMHGKHTGAINPNNKLPITCTNCHGQPSLHHREGVKDVMRFNDP
                     MYTVEQQNSVCMSCHLPEQLQKAFWPHDVHVTKVTCASCHSLHPQQDTMQTLNEKGRI
                     KICVDCHSDQRTNPHFNPASVPLLKEQP"
     gene            1686..2357
                     /gene="nrfC"
                     /locus_tag="MOX77_004548"
     CDS             1686..2357
                     /gene="nrfC"
                     /locus_tag="MOX77_004548"
                     /EC_number="1.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase Fe-S protein"
                     /protein_id="HCA3359919.1"
                     /translation="MSCTRRQFITRVGALAAVSGMAGRVVANTLNINGVRYGMVHDES
                     LCIGCTACMDACREVNNVPEGVSRLTIIRSEPQGTFPDVKYRFFRHSCQHCDHAPCVD
                     VCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYRVRFIHPVSKTADKCDFCRKTNL
                     KAGKQPACVESCLTKALTFGNLDDPNSDISRLLRQKTTYRYKLALGTKPKVYRVPFNY
                     GEVSQ"
     gene            2354..>3053
                     /gene="nrfD"
                     /locus_tag="MOX77_004549"
     CDS             2354..>3053
                     /gene="nrfD"
                     /locus_tag="MOX77_004549"
                     /EC_number="1.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase subunit NrfD"
                     /protein_id="HCA3359920.1"
                     /translation="MTSASAFHFASLVWDWPIAIYLFLIGISAGLVTLAILLRRFHPE
                     AGGSDSTLLRTTLVLGPGAIILGLLILVFHLTRPWTFWKLMFHYSFTSVMSMGVMLFQ
                     LYMVVLILWLAKIFEKEVIALQQRWLPRLEIVQKVLTLIAPFHRALETLMLVLAVLLG
                     AYTGFLLSALKSYPFLNNPILPVLFLFSGISSGAAVALIAMALRHRSNPHSTEARFVH
                     RMEVPVVWLEIFLLA"
BASE COUNT          700 a          823 c          869 g          661 t
ORIGIN      
        1 ttccatggca aatgggcgcg cggcggcccg gaaattgtca acgatttggg ctgtgccgac
       61 tgtcataaca ccgcgtcgga cgatttcgcc caggggaagc cagcgataac gttgtcgcgc
      121 ccctatgccg aacgggcgat ggaggctatc ggcaaaccgt ttgataaagc gggacgattt
      181 gatcagcaat cgatggtctg cggccagtgc cacgtggagt actacttcga cggtaagaac
      241 aaagccgtta agttcccgtg ggatgagggc atgaaggtcg aaaatatgga gcaatactac
      301 gacgccatcg ccttctctga ctggactaac tcgctgtcga aaaccccaat gctcaaagcg
      361 cagcacccgg aatatgaaac ctggagcgcg ggcattcacg gtaagaacaa cgtgacctgt
      421 atcgactgcc acatgccgaa agtacagaac gccgaaggca agctctacac cgaccataaa
      481 atcggcaacc cgttcgacaa tttcgcgcaa acctgcgcca actgccacac ccaggacaaa
      541 gcgtccctgc aaaaagtggt cgccgagcgt aaacaggcga ttcatgacct gaaaatcaag
      601 gttgaagatc agctggtaca tgcgcacttc gaagcgaaag ccgcatggga tgcgggggcg
      661 acagacgcgg aaatgaaacc gattctgaac gatattcgcc acgcgcagtg gcgttgggat
      721 ctggcgattg cgtcacacgg tattcatatg catgccccgg aagaaggtct acggatgtta
      781 ggcagtgcga tggataaagc cgcggatgcc cgaactaaac tggcgcgact gctggcgacc
      841 aaaggcatta cccatgaaat tccgctgccg gatatttcga cgaaagagaa ggcgcagaaa
      901 gcgattggtt tgaatatgca acaaatcaac gcggagaagc aggacttcct gaaaacggtc
      961 gtaccgcagt gggaagatca ggcgcgtaaa aacggtctgt taagccaata acctcacatg
     1021 tgacaaattt gccggatgac agcgcaagcg ctttatccgg cctacagaag tcttgtaggc
     1081 cttaaagctg cgcgccatca ggcattatgt aatggagtga atatgagcgt attacgttcg
     1141 ttattaactg ctggggtgct ggcatcaggc ctgttctgga gcctgagtgg aattactgcc
     1201 acgccaacgc cgcaggagtc ggatcaacgc tggacggtca cccagcagcg taatccggat
     1261 gctgcctgtc tggactgtca caagccggac accgaaggta tgcacggtaa acatacgggc
     1321 gctatcaacc cgaacaataa attgccgata acctgtacca actgccacgg tcaaccgtcg
     1381 cttcaccacc gtgaaggggt gaaagatgtg atgcgtttta acgacccgat gtatacggta
     1441 gagcagcaga acagcgtctg tatgtcctgc cacttgcctg aacaactgca aaaagcgttc
     1501 tggccgcacg atgttcatgt tactaaagtg acctgcgcca gttgccattc cctgcatccg
     1561 cagcaagaca cgatgcagac gctaaacgag aaagggcgga tcaaaatatg cgtggattgc
     1621 cacagcgatc agcgtactaa cccgcacttt aacccggcgt ccgttccgtt gcttaaggag
     1681 cagccatgag ttgcacccga cgtcaattta ttacccgcgt cggcgcgctg gcggcggtca
     1741 gtgggatggc aggacgcgtt gtagcgaaca cgttgaatat taacggcgtg cgttatggca
     1801 tggtacacga tgagtcatta tgcatcggct gcacggcctg catggatgcc tgtcgggaag
     1861 tcaacaacgt gccggaaggc gtatcgcgcc tgacgattat tcgcagcgag ccgcagggga
     1921 cgtttcctga tgtgaaatat cgcttcttcc gccactcgtg ccagcattgc gaccatgccc
     1981 cctgcgttga cgtctgcccg accggcgcat cattccgcga tgccgccagt ggtattgtcg
     2041 acgtgaaccc ggacctttgc gtcggctgtc agtactgcat tgccgcgtgt ccctaccgcg
     2101 tgcgctttat ccatccggtc agtaagacgg cggataagtg cgatttctgc cggaaaacta
     2161 acctgaaagc gggcaaacag cccgcctgcg ttgagtcatg tctaacgaag gcgctgacgt
     2221 ttggtaatct ggacgatccc aacagcgata tctcccgttt gttgcggcag aaaaccacct
     2281 atcgttacaa gctggcgctg ggcacaaaac cgaaggtcta ccgcgttccc tttaactatg
     2341 gggaggtgag ccaatgacat ccgcttctgc atttcatttt gcatcactgg tgtgggactg
     2401 gcccatcgcc atctatctgt tcctgattgg catctccgcc ggactggtta cgttggcgat
     2461 tctgctacgc cgcttccatc cggaggcggg cggttcggac agcacgctgc tgcgcactac
     2521 gctggtgtta gggccggggg cgattattct tggtctgctg attctggtct tccacctgac
     2581 gcgcccgtgg accttctgga agctgatgtt tcactacagc tttacctcgg tgatgtcgat
     2641 gggggtgatg ctgttccagc tttacatggt ggtcctgata ctgtggctgg cgaaaatctt
     2701 tgaaaaagag gtgattgccc tgcagcaacg ttggctgccg cggttagaga tcgtgcagaa
     2761 agtgttgacg ctgatcgcgc cgttccaccg tgcgctggag acgttaatgc tggtgctggc
     2821 ggttctgctc ggcgcgtaca ccggctttct gctgtcggcg ctgaaatcct atccgttcct
     2881 gaataacccg atcctgccgg tactattcct gttctccggg atttcctccg gcgcggcggt
     2941 ggcgctgatc gccatggcgt tacgccatcg tagcaacccg cacagcacgg aagcgcgctt
     3001 tgtgcatcgc atggaggttc cggtggtatg gctggaaatt ttcctgctgg cgg
//
LOCUS       DAGWFR010000295         3036 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.298, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000295 DAGWFR010000000
VERSION     DAGWFR010000295.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 3036)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3036)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3036
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.298"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..509
                     /locus_tag="MOX77_004550"
     CDS             <1..509
                     /locus_tag="MOX77_004550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001388200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tail fiber protein"
                     /protein_id="HCA3359921.1"
                     /translation="GVPVPWPSATPPAGWLKCNGAAFSSEMYPNLAKAYPTNKLPDLR
                     GEFIRGWDDGRGVDAGRALLRLQDDSFEAHRHESFFYAGISRNEIPLKNLPSSDEMLT
                     LSSTTNALSPDGIDATNSLIGNDDYNCLIEGNKNNKRTATGLSTSIVGATETRPRNIA
                     FNYIVRAA"
     gene            520..996
                     /locus_tag="MOX77_004551"
     CDS             520..996
                     /locus_tag="MOX77_004551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000503759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber protein"
                     /protein_id="HCA3359922.1"
                     /translation="MGEGSALPVGVPVPWPSATLPEGWLKCNGAAFSSEMYPKLAKAY
                     PANKLPDLRGEFIRGWDDGRGIDAARALLSIQNGMLEKHRHIVVANDGYDTKDEWELA
                     TIFKKTYTQGRGLDATNTGGSLIPSPTLHSRGSIGNTGGSETRPRNIAFNYIVRAA"
     gene            complement(1003..1620)
                     /locus_tag="MOX77_004552"
     CDS             complement(1003..1620)
                     /locus_tag="MOX77_004552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001556994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HCA3359923.1"
                     /translation="MNNAAAVLDQNGIAITAGDITVYNYDAENREYLSATVEYLAYGV
                     GIPAHSCIDAPPEKRPGFAVCRDTDQNIWKYVPDHRGETVYSTENGNAVQITQPGDYP
                     PDTTVKQPATIYDVWDGETWVTDAGRQHAAELEAAGAHRQQLEEQAMASVELINLKLR
                     AGRRLTPQETEKLNAVLDFIDVLNATDISTAPDINWPEMPLAAAS"
     gene            complement(1620..2123)
                     /locus_tag="MOX77_004553"
     CDS             complement(1620..2123)
                     /locus_tag="MOX77_004553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001802272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber protein"
                     /protein_id="HCA3359924.1"
                     /translation="MGEGSALPVGVPVPWPSATPPAGWLKCNGAAFSSEMYPKLAKAY
                     PTNKLPDLRGEFIRGWDDGRGIDSGRSLLNAQSHSVIDHIHYMELWTGEGLAANSTRA
                     GTNPGILATYGDGGIVKTDESGVKVPSSLRAIGTRGVYRLGANGGNTGTENRPRNIAF
                     NYIVRAT"
     gene            complement(2134..2595)
                     /locus_tag="MOX77_004554"
     CDS             complement(2134..2595)
                     /locus_tag="MOX77_004554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001298743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber protein"
                     /protein_id="HCA3359925.1"
                     /translation="MGEGSALPVGVPVPWPSATLPEGWLKCNGAAFSSEMYPKLAKAY
                     PTNKLPDLRGEFIRGWDDGRGIDAGREILSFQEGTIVSGFDDNDTGDISSLSSTQYGF
                     GDTLSSNQWGAINGKKWIFDASSKGAQKYDWWAYVSARPRNIAFNYIVRAA"
     gene            complement(2606..3007)
                     /locus_tag="MOX77_004555"
     CDS             complement(2606..3007)
                     /locus_tag="MOX77_004555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000283397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber protein"
                     /protein_id="HCA3359926.1"
                     /translation="MKCNGAAFSSEMYPNLAKAYPANKLPDLRGEFIRGWDDERGIDP
                     GRQLLEWQKGTLVGGRDDNDAAVDISYMSNGNSIDYGGDKTFSTNYRSDYLWYAILGN
                     VTGRAKAALSGSFFNVTRPRNIAFNYIVRAT"
BASE COUNT          786 a          758 c          701 g          791 t
ORIGIN      
        1 ttggtgtgcc cgttccgtgg ccctcagcca caccgccagc agggtggctg aaatgtaacg
       61 gcgcagcatt ttcttctgaa atgtacccca atctggcaaa ggcttatcct acaaataaac
      121 taccggatct acggggtgaa tttatccgtg gctgggatga cggacgtggc gtggatgcgg
      181 ggcgagcctt gctaaggctt caggatgact cttttgaagc gcacaggcat gagtcctttt
      241 tttatgcggg tatttcacgc aatgaaatcc cattaaaaaa tcttccaagt tcagacgaga
      301 tgctgacttt aagttccaca actaatgcct tgtcaccgga cggtattgat gccaccaatt
      361 cgttaattgg taatgacgat tacaactgtc tgatcgaagg gaataaaaat aacaaacgaa
      421 cagcaacggg tctaagtacc agtattgtcg gcgcaactga aacccgcccc cgtaacattg
      481 cgtttaatta catcgtaagg gcggcataga aacgttggtt tgggggaagg ctctgcactg
      541 cccgttggtg tacctgttcc gtggccgtca gcaacactgc cagagggatg gctgaaatgt
      601 aacggcgcag cattttcttc tgaaatgtac cccaaactgg caaaggctta ccccgcgaat
      661 aaattaccgg atttacgggg tgagtttatt cgtggctggg atgatgggcg aggaattgat
      721 gcggcacgcg ctttattgag cattcaaaac gggatgttgg aaaaacaccg ccatattgtt
      781 gtagctaacg atggatatga cacaaaagat gaatgggagt tggccacgat tttcaaaaaa
      841 acatatacac aaggcagggg gcttgatgcc acaaatacag gagggagttt gattccatca
      901 ccaacgcttc attcacgagg aagtattggt aacacaggtg gtagtgaaac ccgcccccgc
      961 aatattgcat ttaactatat cgtgagggcg gcttagttat attcaactgg ctgctgccag
     1021 aggcatttcc ggccagttga tatccggtgc agtgctgatg tcagtcgcat taagcacatc
     1081 tatgaaatca agcacggcgt ttagtttttc cgtctcctgg ggcgtcaatc ggcgtccggc
     1141 tcgtagtttg agatttataa gctcaacaga tgccattgcc tgttcctcaa gttgctgacg
     1201 atgcgctccg gcagcttcca gttctgctgc gtgctgtcgt cccgcatctg tcacccaggt
     1261 ctcaccatcc cagacatcat agatagtagc tggctgtttc accgtcgtat caggagggta
     1321 atctcccggt tgtgtgattt gcacagcgtt accattctct gtgctgtaaa ccgtttcgcc
     1381 tctgtggtct ggaacatatt tccagatgtt ctggtcggta tcacgacaga cagcgaagcc
     1441 ggggcgtttt tctggtggcg cgtcaatgca tgagtgagcc ggaattccaa caccataagc
     1501 gagatactca acagtggcag agagatattc acggttttca gcatcgtagt tataaacggt
     1561 aatatcgcct gcagttatag cgataccatt ctgatcaagt actgcagcag cattattcat
     1621 taagtagccc ttacaatata gttaaacgca atattacggg ggcggttttc cgttcctgta
     1681 ttccctccgt tggcacctaa tctataaaca ccacgagtgc caatagcacg tagtgaagat
     1741 ggaactttta cacctgactc atctgtttta acaatcccgc catcaccgta tgtagccagt
     1801 ataccagggt ttgttcctgc acgggtgcta tttgcggcaa gcccttcacc agtccataac
     1861 tccatatagt gaatatgatc tataaccgaa tgtgattgtg cattaagcaa ggaacgccct
     1921 gaatcaattc cccgcccgtc atcccagcca cgaataaact caccccgtaa atccggtaat
     1981 ttattcgtgg ggtaagcctt tgccagtttg gggtacattt cagaagaaaa tgctgctccg
     2041 ttacatttca gccaccctgc tggcggtgtg gctgagggcc acggaacagg tacaccaacg
     2101 ggcagtgcag agccttcccc caaaccaacg tttctatgcc gctcttacga tgtaattaaa
     2161 tgcaatatta cgcggacgag ctgatacata agcccaccag tcatattttt gtgcaccttt
     2221 actggatgca tcaaatatcc actttttgcc atttatggcc ccccattgat tagagcttaa
     2281 agtgtcacca aatccgtatt gtgttgagct gagtgaactg atatccccag tatcattatc
     2341 atcaaaaccg gagacgatag tgccttcctg aaatgaaagt atctctcgtc ctgcatcaat
     2401 acctcgtccg tcatcccagc cacgaataaa ctcaccccgt aaatccggta atttattcgt
     2461 ggggtaagcc tttgccagtt tggggtacat ttcagaagaa aatgctgcgc cgttacattt
     2521 cagccatccc tctggcagtg ttgctgacgg ccacggaaca ggtacaccaa cgggcagtgc
     2581 agagccttcc cccaaaccaa cgtttctatg ttgctctcac aatgtagtta aaggcgatgt
     2641 tgcgtggacg agttacatta aaaaaggacc cacttaaagc agctttggca cgaccagtga
     2701 cgttacccag aattgcatac cataaataat cactccggta attcgttgaa aatgttttat
     2761 cgccaccgta atcaatacta tttccgttac tcatatatga aatatcaact gcggcatcat
     2821 tgtcatctct accaccaacc aaagtacctt tctgccactc aagcaactgg cgaccaggat
     2881 caatcccgcg ctcgtcatcc cagccacgaa taaactcacc ccgtaaatcc ggtaatttat
     2941 tcgcggggta agcctttgcc agattggggt acatttcaga agaaaatgct gctccgttac
     3001 atttcagcca ccctgctggc ggtgtggctg agggcc
//
LOCUS       DAGWFR010000296         3032 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.299, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000296 DAGWFR010000000
VERSION     DAGWFR010000296.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 3032)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3032)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3032
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.299"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..837)
                     /locus_tag="MOX77_004556"
     CDS             complement(<1..837)
                     /locus_tag="MOX77_004556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001528616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3359927.1"
                     /translation="MKLKTNTHLLSGLQACLFCVTAFFAQAAQSSAPWQEPDVSTAAI
                     NGTPPLADGVTIPVYQGSVQLRSDAANPVDYSAKPSQFSTSDVGSALTLTNPRDAEGD
                     IFAEPPLVWQSERIPSVTLVWADAATPETPLSPQSSANLTFCEQNMAGRHLVVWSQLD
                     TSTAMPPLWLLTRTGVPYNTAVEVLEQKFAVDIAPAVGDPVTLTADHLDESLNAAKVK
                     AGESITLTVNTKGCNGEPAGNIAFVITRGDAQNRQGVVNNTAPVRVGNTELTTTATEY
                     HGT"
     gene            complement(949..>3032)
                     /locus_tag="MOX77_004557"
     CDS             complement(949..>3032)
                     /locus_tag="MOX77_004557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016505166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3359928.1"
                     /translation="MYGHMPETFTASNGAEFKRPLLYSELASTLGVKSYADTNENWPI
                     VNNFDTSNYGACSINQMATLDDLKALYGDHPSGKVTTDIGLPVRKKWWAGDSLLQGQV
                     IYWRYIDLSTGIDYSMSGTPGNYYYQLCLTKPRQMNIALSTDAWNADKSAAVAKKGET
                     IPMTVKVTNAAGQPVSNATVKITRGDALTRAGSVYTTNNADDITLSNIQPSGTATYLL
                     GSVDKYMYAQTDAQGQITFSVSQNNTMGLKTPIRVTVANDITATSSKDVIFTVLTSPD
                     VASANYWGHMPETVEGPDGLRYQRPHLQAEAPSGVNYITVNGEKWAAPTGVQTYTAGQ
                     SACDVEYMPLMNDLKALQQLYPDGALEDQFGWPVKTGKLWWSADLNSSKAHQAINLKT
                     GQISAPTSTSLQACLVNARNVPASITLTSTAMDAEKGAAVAKKGEAIPLTVTVKNRAG
                     VPIANEPFTLKRGDANDRLDIKYTWNTTADDLTLQELTPSPTTKSMTASGNVFSGVTG
                     ADGTATFTVNQDGSVGLKTELTASATGDVTQSTNTALGVIFNVITSPDTDKAQYWGHM
                     PDTLTVGGVTLHRPLLMKEAPAGATDSRKENNETWVSVYTKADGLTYDMSKNCGGVAG
                     FPAKGVLEKIRDEQMAVANGWPTVSLPYASSTPGTYNYCWVSLAKGGTTHCPTTSSDY
                     SIGYAACLVQP"
BASE COUNT          592 a          895 c          817 g          728 t
ORIGIN      
        1 cgtgccgtgg tattcggtgg cagtggtggt gagttcggtg ttgccgacgc gtaccggcgc
       61 ggtattgttc accacgccct ggcggttttg cgcatcgccg cgggtaatca caaacgcgat
      121 attgcccgct ggctcaccgt tacaaccttt ggtattcacc gtcagcgtga tgctttcgcc
      181 cgctttcacc ttcgcggcgt taagcgactc atccagatga tcggcggtaa gggttaccgg
      241 gtcacccacg gcgggcgcga tatccacggc aaacttttgt tcaagcactt cgaccgccgt
      301 gttataaggc acgccggtgc gggtaagcaa ccacagcggc ggcatagcgg ttgaggtatc
      361 cagttgcgac cagactacca gatggcggcc tgccatattt tgctcacaga acgtcaggtt
      421 tgccgacgat tgtggagaca gcggcgtctc cggcgtggcg gcgtcggccc ataccagcgt
      481 gacggagggt atccgttcac tctgccagac cagcggcggc tcggcgaaaa tatcgccttc
      541 ggcatcgcgc ggattggtta aggtcagcgc gctgccgaca tcactggtgc tgaactggct
      601 gggtttcgcg gaataatcga cgggattcgc tgcatcagat cgcaactgaa cgctgccctg
      661 ataaaccggg atcgtcacgc cgtcagccag cggcggcgtg ccgttaatgg cggcagttga
      721 gacgtcaggc tcctgccatg gggcgctgct ttgcgccgcc tgggcaaaaa aagcggtaac
      781 acaaaacaga catgcctgta gcccggataa aagatgggta ttcgttttca gtttcaatgc
      841 agcacctgga atacatccct ttctgactat tcattccatc ggcggtaaaa atgcgaaacg
      901 tttcactacc ggtaccaacg acaatttacc gaaacccaac catcccgatc acggctgtac
      961 aagacaggcg gcatagccta tcgagtaatc gctgctggtg gtcgggcaat gtgttgtgcc
     1021 ccctttcgct aacgaaaccc agcaataatt atacgtccca ggcgtactgc tagcgtaagg
     1081 caacgaaact gtcggccatc cgttagcgac cgccatctgc tcatcgcgta ttttttccag
     1141 cacgcctttt gccgggaacc cggccacccc gccacagttc ttgctcatat cataggtaag
     1201 accatcggct ttcgtataaa ccgaaaccca ggtttcgtta ttttctttcc ggctatccgt
     1261 cgcgccagca ggcgcttctt tcatcaacaa ggggcgatgc agcgtcacgc caccaaccgt
     1321 cagcgtatcc ggcatatgcc cccagtactg cgctttatcg gtatccgggc tggtaatcac
     1381 gttaaagatc acgcccagcg ctgtgttggt tgattgcgtg acatcccccg tcgcgctggc
     1441 cgtcagctcg gtttttagcc ccacactgcc gtcctggttc accgtaaacg ttgccgtccc
     1501 gtcagccccc gtgacgccgc taaacacatt gccggaagcc gtcattgatt tcgttgtcgg
     1561 cgacggcgtc agttcctgca acgtcaaatc gtctgctgta gtattccacg tatatttaat
     1621 gtcgaggcga tcattcgcat cgccccgttt cagggtaaac ggttcattcg ctatgggaac
     1681 gcccgcgcgg tttttcaccg tcaccgtcaa gggaatagcc tcgccttttt tcgccaccgc
     1741 cgcgcctttc tccgcatcca tcgccgtcga ggttagcgta atggaggcag ggacattacg
     1801 cgcattgacc aaacaggcct gcaagctggt ggaggttggc gccgatatct gaccggtttt
     1861 caggtttatc gcctggtgtg ctttcgagct attcagatcg gcagaccacc agagtttacc
     1921 ggttttcacc ggccagccga attgatcctc cagcgcgccg tcaggataca gttgctgtag
     1981 cgcctttaag tcattcatca gcggcatata ctcaacgtcg cacgcagact ggcctgccgt
     2041 atacgtctgt acgccggtcg gcgccgccca tttttcaccg ttcacggtga tgtagttgac
     2101 gcccgacggc gcttccgcct gcaaatgcgg gcgctggtag cggaggccgt ccggcccttc
     2161 cacggtttcc ggcatatgcc cccagtagtt ggcgctggcg acgtccgggc tggtaaggac
     2221 ggtaaatatc acgtccttac tgctcgttgc ggtaatgtca ttcgcaacgg tgacgcggat
     2281 gggcgtttta agacccatag tattattttg cgacacgcta aacgttattt gcccctgggc
     2341 gtccgtttgc gcatacatat atttatccac cgaccccagc aagtacgtcg ccgtaccgga
     2401 aggctggata ttacttaagg taatatcgtc cgcgttgttg gtggtataca cgctccccgc
     2461 acgcgtcagc gcatcgccgc gcgtgatttt caccgtcgcg ttgctaacag gctgcccggc
     2521 agcgttcgtc accttcaccg tcatggggat cgtttcgcct tttttcgcca cggccgccga
     2581 tttgtccgcg ttccaggcgt ccgtagagag cgcgatattc atctggcgcg gtttggtcag
     2641 gcagagctgg taatagtaat tacccggcgt tcccgacatg gagtaatcta tgcccgtact
     2701 gagatcgata tatcgccagt atatgacttg accttgcagc aggctgtcgc ccgcccacca
     2761 tttcttcctg acgggtaagc ctatgtcggt cgtgaccttg ccgctggggt gatcgccgta
     2821 cagcgccttg agatcatcca gcgtggccat ctgatttatc gaacaggcgc cataattact
     2881 ggtatcaaaa ttattcacta taggccagtt ttcatttgtg tcggcatagc tcttcacacc
     2941 taacgtcgac gccagctcgc tatacagcag cgggcgctta aactccgcgc cgttgctggc
     3001 ggtgaaggtt tccggcatat ggccatacat at
//
LOCUS       DAGWFR010000297         3032 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.300, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000297 DAGWFR010000000
VERSION     DAGWFR010000297.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 3032)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3032)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3032
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.300"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..1106)
                     /gene="purD"
                     /locus_tag="MOX77_004558"
     CDS             complement(<1..1106)
                     /gene="purD"
                     /locus_tag="MOX77_004558"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HCA3359929.1"
                     /translation="MKVLVIGNGGREHALAWKAAQSPLVDTVFVAPGNAGTALEPALQ
                     NVAIGVTDIPALLSFAQNEKIDLTIVGPEAPLVIGVVDAFRAAGLKIFGPTEGAAQLE
                     GSKAFTKDFLARHQIPTAEYQNFTEIEPALAYLREKGAPIVIKADGLAAGKGVIVAMT
                     LEEAEAAVHDMLAGNAFGDAGHRIVIEEFLDGEEASFIVMVDGEHVLPMATSQDHKRV
                     GNGDTGPNTGGMGAYSPAPVVTDEVHQRTMERIIWPTVKGMAAEGNTYTGFLYAGLMI
                     DKQGNPKVIEFNCRFGDPETQPIMLRMKSDLVDLCLAACDGKLDEKTSEWDERASLGV
                     VIAAGGYPGSYSTGDEIHGLPLEEVADGKVFHAGT"
     gene            complement(1122..2711)
                     /gene="purH"
                     /locus_tag="MOX77_004559"
     CDS             complement(1122..2711)
                     /gene="purH"
                     /locus_tag="MOX77_004559"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HCA3359930.1"
                     /translation="MQQRRPVRRALLSVSDKAGIIEFAQALSARGVELLSTGGTARLL
                     AEKGLPVTEVSDYTGFPEMMDGRVKTLHPKVHGGILGRRGQDDAIMEQHHIAPIDMVV
                     VNLYPFAETVAREGCSLADAVENIDIGGPTMVRSAAKNHKDVAIVVKSSDYDAIIKEM
                     DANEGSLTLDTRFDLAIKAFEHTAAYDSMIANYFGSMVPAYHGESKEAAGRFPRTLNL
                     NFIKKQDMRYGENSHQQAAFYIEENVKEASVATAQQIQGKALSYNNIADTDAALECVK
                     EFNEPACVIVKHANPCGVAVSTSILDAYDRAYKTDPTSAFGGIIAFNRELDAETAQAI
                     ISRQFVEVLIAPSASEEALKITSAKQNVRVLTCGQWASRVPGLDFKRVNGGLLVQDRD
                     LGMVSEAELRVVSKRQPTEQELRDALFCWKVAKFVKSNAIVYAKENMTIGIGAGQMSR
                     VYSAKIAGIKAADEGLEVKGSAMASDAFFPFRDGIDAAAAVGVSCVIQPGGSIRDDEV
                     IAAADEHGIAMIFTDMRHFRH"
BASE COUNT          612 a          864 c          851 g          705 t
ORIGIN      
        1 gtgcccgcgt ggaaaacctt accgtcagcc acttcttcca gcggcagacc gtggatctcg
       61 tcgccggtgc tgtagctgcc cggataaccg cccgcggcga tcaccacgcc taatgaagcg
      121 cgttcgtccc actcggaggt tttctcatcc agcttgccgt cacaggcggc caggcaaaga
      181 tccaccagat ccgatttcat gcgcagcatg atcggctggg tttccggatc gccgaagcgg
      241 cagttgaact cgataacttt cgggttgccc tgcttgtcga tcatcagacc cgcatacagg
      301 aagccggtgt acgtgttacc ttctgctgcc atgcctttca cggttggcca gatgatgcgt
      361 tccatggtgc gctggtgcac ttcatcagtc accaccggcg ccggggagta agcacccatg
      421 ccgccagtat tcgggccggt atcgccgttg cctacgcgtt tgtgatcctg gctggtggcc
      481 atcggcagca cgtgctcgcc gtcgaccatc acgataaagc tcgcttcttc gccgtcgagg
      541 aactcttcaa tcacgatacg gtggcccgcg tcgccaaagg cgttgcctgc cagcatgtca
      601 tgaacggcgg cttcggcttc ttccagcgtc atcgccacga tgacgccttt gcccgcagcc
      661 agaccatcgg ccttgatgac gatcggcgcg cccttctcac gcagataagc caaggcaggc
      721 tcaatctcgg tgaaattctg gtattccgcc gtcggaatct gatgacgggc gaggaaatct
      781 ttggtgaacg ctttggagcc ttccagttgc gcggctcctt cggttgggcc aaagatcttc
      841 agacccgccg cgcggaacgc atcgaccacg ccgatcacca gcggcgcttc cggaccgacg
      901 atggtcagat caatcttctc gttctgggca aagctcagca gcgccggaat atcggtgacg
      961 ccgatagcca cgttctgcaa cgcgggctcc agcgcggtac cggcgttacc cggtgcgaca
     1021 aaaacggtat caaccagcgg cgactgtgcg gctttccagg ccagcgcatg ttcgcgcccg
     1081 ccgttaccaa tgactaaaac tttcatcgtc tgctccctga attaatggcg gaagtggcgc
     1141 atgtcggtga agatcatcgc aatgccgtgt tcgtcggcgg cggcaatgac ttcatcatca
     1201 cggatagaac cgccaggctg gataacgcag ctcacgccga cagcggcagc ggcatcaatg
     1261 ccatcacgga acgggaagaa cgcgtcggaa gccatagcag agcctttcac ttccagacct
     1321 tcgtcagccg ctttaatgcc agcgattttc gcggagtaca cgcggctcat ctggcctgcg
     1381 cctatgccga tagtcatgtt ctctttggca tacacaatgg cgttggattt cacgaacttg
     1441 gctaccttcc agcagaacag cgcatcgcgc agttcctgct cggtcggctg gcgtttggac
     1501 accacgcgca gttcagcttc gctcaccata cccagatccc tgtcctgaac cagcagaccg
     1561 ccgttaacgc gtttgaaatc caggcccgga acgcggcttg cccattggcc gcaggtcaga
     1621 acacggacgt tctgcttggc tgaggtgatt ttcagcgctt cttcgcttgc ggatggggcg
     1681 atgagcactt ccacgaactg acgggagatg atggcctgcg cggtttcggc atccagctcg
     1741 cggttgaagg cgataatgcc gccgaacgcg gaggtcgggt ctgttttata cgcacggtca
     1801 taagcatcga gaatcgaggt acttaccgcc acgccgcacg ggttggcgtg cttgacgatc
     1861 acgcaggctg gctcgttgaa ctctttcacg cattccagcg ccgcatcggt atcggcgata
     1921 ttgttataag agagcgcttt gccctgaatc tgctgtgcgg tggcaacgga tgcttctttc
     1981 acattctctt ctatatagaa ggcagcctgc tggtggctgt tctcgccgta gcgcatatcc
     2041 tgcttcttaa tgaagttcag gttcagcgta cgcgggaagc gaccggcggc ttctttgctt
     2101 tcaccgtggt aggccggaac catgctgccg aagtagttgg cgatcatgct gtcgtaggcg
     2161 gcggtgtgtt cgaaggcttt aatcgcgaga tcgaaacggg tgtcgagggt cagagaacct
     2221 tcgttagcat ccatctcttt aataatggcg tcgtagtcgc tgctcttcac cacgatggcg
     2281 acgtctttat ggttcttagc agcagagcgc accatggtcg ggccgccgat atcaatgttc
     2341 tctactgcat ctgccagcga gcagccttcg cgtgccacgg tttcggcgaa cggatatagg
     2401 ttaacgacaa ccatatcgat aggggcgatg tggtgctgtt ccataatggc atcgtcctga
     2461 ccgcgacgac cgaggatgcc accgtgtact tttggatgca gggtctttac gcgtccatcc
     2521 atcatttccg ggaaaccggt gtaatcggaa acttcggtca ccggcaggcc tttttctgct
     2581 aacaggcggg cggtgccccc cgtagacagc agctccacac cgcgtgcgga aagtgcctgg
     2641 gcgaattcga tgataccggc cttgtcagaa acactgagca aagcgcggcg gactggacga
     2701 cgttgttgca tggtaaatcc cctggatttg acgattatag agagcgttag ctgaattttt
     2761 cgtgaaaaac tcagctaacg ctccttatgg ggcattctca ttttgcggcg acattgtaac
     2821 gaaaacgttt gcgcaacgct cgcgaatttt tctctttaaa ttctggcccc gcttttatcc
     2881 ctgaaagatc gtttgcagag tgagaagatc gaggaaatga acgcgcattt tgtggataag
     2941 tctgtgcgta aatgggtata accaagggtt ttgctgggga atgcagcaaa cagtcatttt
     3001 tctgcaattt ttctattgcg gtcagcagat aa
//
LOCUS       DAGWFR010000298         3008 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.301, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000298 DAGWFR010000000
VERSION     DAGWFR010000298.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 3008)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3008)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3008
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.301"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            79..1872
                     /gene="hyaB"
                     /locus_tag="MOX77_004560"
     CDS             79..1872
                     /gene="hyaB"
                     /locus_tag="MOX77_004560"
                     /EC_number="1.12.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni/Fe-hydrogenase large subunit"
                     /protein_id="HCA3359931.1"
                     /translation="MSNQYQTQGYTVNDAGRRLIVDPITRIEGHMRCEVNIDEQNVIT
                     NAVSCGTMFRGLEIILQGRDPRDAWAFVERICGVCTGVHALASVYAIEDAIGIQVPDN
                     ANIIRNIMLATLWCHDHLVHFYQLAGMDWIDVLNALKADPRATSQLAQSLSAWPMSSP
                     GYFFDVQNRLKKFVDGGQLGIFRNGYWGHPQYKLSPEANLMGFAHYLEALDFQREIVK
                     IHTIFGGKNPHPNWIVGGMPCAINLDQSGAVGAINMERLNLVQSIITRTADFINNVMV
                     PDALAIGQFNKAWSQIGTGLSDKCVLSYGAFPDIANDFSQQSLLMPGGAVVNGDFKNV
                     MPVDLADPQQIQEFVDHAWYRYPDDRLGRHPFDGITDPWYNPGDVKGSDTHIQQLNEQ
                     ERYSWIKAPRWRGHAMEVGPLARTLIAYHKGDAATIESVDRMMSALKLPLSGIQSTLG
                     RILCRAHEAQWAVGKLQYFFDRLMTNLKNGDLATANTEKWEPASWPQHCRGIGFTEAP
                     RGALGHWASIRDQKIELYQCVVPTTWNASPRDPKKQIGAYEAALMGTQMAIPDQPLEI
                     LRTLHSFDPCLACSTHVLGDDGSELIAVQVR"
     gene            1891..2622
                     /gene="hyaC"
                     /locus_tag="MOX77_004561"
     CDS             1891..2622
                     /gene="hyaC"
                     /locus_tag="MOX77_004561"
                     /EC_number="1.12.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni/Fe-hydrogenase b-type cytochrome subunit"
                     /protein_id="HCA3359932.1"
                     /translation="MTGKLSPRVGEARDTAVSHYVFEAPVRLWHWLTVACMLVLMVTG
                     YFIGRPLPSVSGEATYLFYMGYIRLIHFAAAMIFIVLLLGRIYWACVGNRYSRELFIV
                     PVWRRSWWQGAFSVVRWYLFLEKKPGSDIGHNPIAQAAMFGYFLLSVFMILTGFALFG
                     EHSQYAIFAPFRYVVEFFYWTGGNSIDIHSWHRLGMWLIAAFIVGHVYLAIREDIMSD
                     DTVISTMINGYRSHKFPKPHDKEPS"
     gene            2619..>3008
                     /locus_tag="MOX77_004562"
     CDS             2619..>3008
                     /locus_tag="MOX77_004562"
                     /EC_number="3.4.23.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 1 maturation protease"
                     /protein_id="HCA3359933.1"
                     /translation="MNAQRVVVMGLGNLLWADEGFGIRVAERLYARYHWPEEVEIVDG
                     GTQGLNLLGYVEQASHLLLLDAIDYGLAPGSLRTYAGEKIPAYLSAKKMSLHQNSFSE
                     VLALADIRGHLPCHIALVGLQPALLDDY"
BASE COUNT          662 a          833 c          837 g          676 t
ORIGIN      
        1 cgcgctcaac caacgtaaac gccacaaaca acagttagcg caagccgaac aacagccgga
       61 caatgaggat aaacaggcat gagtaaccag tatcaaaccc agggttatac cgttaacgac
      121 gccggccgtc gtctgatcgt ggacccgatt acccgcatcg aagggcatat gcgctgcgaa
      181 gtgaacattg atgagcaaaa cgtcattacc aatgccgttt cctgcggcac gatgttccgc
      241 gggctggaga tcattctgca aggccgtgac ccacgtgacg cctgggcgtt tgttgaacgt
      301 atttgtggtg tctgtaccgg ggtacatgct ctggcgtcgg tgtacgctat cgaagatgcg
      361 attggtatcc aggtaccgga taacgccaat attatacgta acatcatgct ggctacgttg
      421 tggtgccacg atcatttggt ccatttttat cagttagccg gcatggactg gattgatgtt
      481 ctgaatgcgc tgaaagccga tccacgcgcc acctcgcagc tggcgcaaag cctttccgcc
      541 tggccgatgt catcgccggg ctacttcttt gacgtacaaa atcgattgaa gaaatttgtc
      601 gatggcggcc agcttgggat attccgtaac ggctattggg gacatccaca gtacaaactg
      661 tcgccagagg ctaatctgat gggttttgcc cactatcttg aagccctcga cttccagcgc
      721 gagatcgtca aaatccatac catatttggc ggtaagaacc cccatcctaa ctggatcgtc
      781 ggcgggatgc cgtgcgcgat caatctcgat caaagcggcg cggtcggggc tatcaatatg
      841 gagcgcctca acctggtgca gtcgatcatc acccgcaccg ccgacttcat taacaacgtg
      901 atggttccgg acgcgctggc tatcggccag ttcaataaag catggagtca aattggcacc
      961 ggtctgtcgg ataaatgcgt gctgagctac ggcgcatttc cggacattgc caacgacttc
     1021 agccagcaaa gcctgttaat gccgggcggc gcggtggtca atggcgattt taaaaatgtc
     1081 atgccggtag atttggccga tccgcagcag atacaggagt ttgtggatca tgcctggtac
     1141 cgctatccgg acgatcggct gggccgtcat ccttttgacg gcattaccga tccctggtac
     1201 aacccgggtg atgtcaaagg cagcgatacg catatccagc agctcaacga gcaggaacgc
     1261 tactcctgga ttaaagcgcc gcgctggcgg ggtcatgcca tggaagtcgg cccgcttgcc
     1321 cgaacgctta tcgcgtatca caaaggggat gccgccacca tagagtcggt agatcgcatg
     1381 atgtctgccc ttaaactgcc gctctccggt atccagtcta cgcttggccg tattttatgc
     1441 cgcgcgcacg aagcgcaatg ggccgtcggt aagctgcagt attttttcga caggcttatg
     1501 accaacctga aaaacggcga cctggccacc gccaataccg agaaatggga accggccagt
     1561 tggccgcagc actgccgcgg catcggtttt accgaagcgc ctcgtggagc gttgggacac
     1621 tgggcgtcaa tccgcgatca gaagattgaa ctctatcagt gcgtagtccc caccacctgg
     1681 aacgccagcc cacgcgatcc taaaaaacag atcggcgcct atgaagcggc attgatggga
     1741 acgcaaatgg cgattcccga ccaaccgtta gaaatcctga ggacgctgca cagcttcgac
     1801 ccctgcctcg cctgttcaac ccacgtgctc ggcgacgacg gcagcgaact gattgccgtc
     1861 caggtacgct aagcgttaag gaaaagaacg atgactggaa agctatctcc acgcgtcggg
     1921 gaggcgcgtg atactgccgt cagccactat gtgtttgaag cgccggtacg cctgtggcac
     1981 tggctaacgg tggcctgcat gttggtactg atggtaacag gctacttcat tggccgaccg
     2041 ctgccgtcgg tgagtggcga ggcgacctat ctgttttaca tgggctatat ccggctgatc
     2101 cactttgccg ccgcgatgat ctttatcgtg ttactgctgg ggcgaattta ttgggcctgt
     2161 gtcggcaacc gctattcgcg agagctgttt atcgtcccgg tctggcgtcg cagttggtgg
     2221 caaggcgctt tctccgtggt ccgctggtat ctgtttctgg agaaaaaacc ggggagcgac
     2281 atcggacata atcctatcgc gcaggccgcg atgttcggct atttcctgtt atcggtattt
     2341 atgatcctca ccggtttcgc tctgtttggc gagcatagcc agtatgccat ctttgcgccg
     2401 ttccgctatg tggttgaatt tttctactgg accggcggca actccatcga tattcacagc
     2461 tggcaccgac tgggcatgtg gctgatcgcc gccttcatcg tcgggcacgt ttacctcgct
     2521 atccgggaag acattatgtc cgacgatacg gtgatctcca ccatgatcaa tggctatcgc
     2581 agccacaaat tccccaaacc gcacgacaag gagccctcat gaatgcgcaa cgtgtagtgg
     2641 tgatgggatt aggaaacctg ctgtgggccg atgaaggatt cggtatccgg gtcgcggagc
     2701 gtttgtatgc ccgatatcac tggcctgaag aggtagaaat tgtggacggc ggtacgcaag
     2761 ggctaaacct gttaggttat gttgagcaag ccagccatct cctgctcctt gacgcgatcg
     2821 attacggcct ggcgccgggc agcctgcgaa cctatgccgg cgagaaaatc cccgcgtatc
     2881 tcagcgccaa aaaaatgagc ctgcatcaaa acagtttttc cgaagttctg gcgctggccg
     2941 acatccgcgg gcatctgccc tgtcacattg cgctggtcgg cctgcaaccg gcgctactgg
     3001 acgactac
//
LOCUS       DAGWFR010000299         2953 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.302, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000299 DAGWFR010000000
VERSION     DAGWFR010000299.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2953)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2953)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2953
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.302"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            5..1015
                     /gene="pduO"
                     /locus_tag="MOX77_004563"
     CDS             5..1015
                     /gene="pduO"
                     /locus_tag="MOX77_004563"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-domain cob(I)yrinic acid a,c-diamide
                     adenosyltransferase PduO"
                     /protein_id="HCA3359934.1"
                     /translation="MAIYTRTGDAGTTSLFTGQRVSKTHPRVEAYGTLDELNAALSLC
                     ACAAADENHRTLLEAIQQQLFWFSAELASDSEQPSPKQRYISSEEISALEAAIDRAMA
                     RVEPLHSFILPGRCEAASRLHFARTLARRAERRLVELATEVNVRQVLMRYINRLSDCL
                     YALARAEDSDAHQANIIREVSKRYLAASQPTRSKETTPVALSFHDLHQLTRAAVERAQ
                     QLQVPVVVSIVDAHGTETVTWRMPDALLVSSELAPKKAWTAVAMKTATHELSDVVQPG
                     AALYGLESHLQGKVVTFGGGYALWRDGILIGGLGISGGSVEQDMDIAQTAIAAINVGT
                     HQ"
     gene            1012..2406
                     /gene="pduP"
                     /locus_tag="MOX77_004564"
     CDS             1012..2406
                     /gene="pduP"
                     /locus_tag="MOX77_004564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-acylating propionaldehyde dehydrogenase
                     PduP"
                     /protein_id="HCA3359935.1"
                     /translation="MNTSELETLIRTILSEQLTTPAQTPAQPQGKGIFQSVSEAIDAA
                     HQAFLRYQQCPLKTRSAIISAMRQELTPLLAALAEESANETGMGNKEDKFLKNKAALD
                     NTPGVEDLTTTALTGDGGMVLFEYSPFGVIGSVAPSTNPTETIINNSISMLAAGNSIY
                     FSPHPGAKKVSLKLISLIEEIAFRCCGIRNLVVTVAEPTFEATQQMMAHPRIAVLAIT
                     GGPGIVAMGMKSGKKVIGAGAGNPPCIVDETADLVKAAEDIINGASFDYNLPCIAEKS
                     LIVVESVAERLVQQMQTFGALLLSPADTDKLRAVCLPEGQANKKLVGKSPSAMLEAAG
                     IAVPAKAPRLLIALVNADDPWVTREQLMPMLPVVKVNDFDSALALALKVEEGLHHTAI
                     MHSQNVSRLNLAARTLQTSIFVKNGPSYAGIGVGGEGFTTFTIATPTGEGTTSARTFA
                     RSRRCVLTNGFSIR"
     gene            2418..>2953
                     /gene="pduQ"
                     /locus_tag="MOX77_004565"
     CDS             2418..>2953
                     /gene="pduQ"
                     /locus_tag="MOX77_004565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-propanol dehydrogenase PduQ"
                     /protein_id="HCA3359936.1"
                     /translation="MNTFSLQTRLYSGQGSLAVLKRFTNKHIWIICDGFLARSPLLDT
                     LCNALPADNRISVFSEITPDPTIHTVVQGIAQMQALQPQVVIGFGGGSAMDAAKAIVW
                     FSQQSGINIETCVAIPTTSGTGSEVTSACVISDPDKGIKYPLFNNALYPDMAILDPEL
                     VVSVPPQITANTGMDVLT"
BASE COUNT          665 a          893 c          849 g          546 t
ORIGIN      
        1 ggttatggcg atttataccc gaacaggtga cgctggcacc acatcactgt ttaccggcca
       61 gcgggtgagc aaaacccacc cgcgggttga agcctacggc acgctggatg aactgaacgc
      121 cgcgctgagc ctgtgcgcct gcgccgctgc ggatgaaaat caccgcacct tactcgaggc
      181 catccagcag caactttttt ggtttagcgc agagctggcc agcgacagcg agcagccatc
      241 gcccaaacag cgctacatca gcagcgaaga gatttcggcc ctggaagccg ctatcgatcg
      301 ggcaatggcc cgcgtcgaac cgctgcacag ctttatttta cccggacgct gcgaagccgc
      361 gagccgatta cattttgccc gcacgctggc gcgccgcgcc gaacgccgtc tggttgaact
      421 ggcaactgaa gtcaacgtac gccaagtgct gatgcgctac atcaaccgct tatcggactg
      481 cctgtacgcc ctggcccgcg cggaagatag cgatgcgcac caggccaaca tcatccgtga
      541 agttagcaag cgctatctgg ctgccagcca gccgacccgc agcaaggaga caacgcccgt
      601 ggccctctca ttccacgatc tgcaccagct cacccgcgcc gccgttgaac gcgcgcagca
      661 actgcaggtt ccggtagtcg tcagcatcgt tgacgcgcac ggcacggaaa ctgtgacctg
      721 gcggatgccg gacgccctgc tggtcagcag cgaactggca ccgaaaaagg catggaccgc
      781 agtggcgatg aaaacggcga cccatgagct gagcgatgtc gttcagccag gcgcggcgct
      841 ttacggtctg gaaagtcatt tacagggaaa agtggtcacc tttggcggcg gttacgccct
      901 atggcgcgac ggcatattaa ttgggggtct tggcatcagt ggcggcagcg ttgagcagga
      961 catggacata gcacagaccg ccatcgcggc tattaacgtg ggaacacatc aatgaatact
     1021 tctgaactcg aaaccctgat tcgcaccatt cttagcgagc aattaaccac gccagcgcaa
     1081 acaccggccc agcctcaggg caaagggatt ttccagtccg tgagcgaggc catcgacgcc
     1141 gcgcatcagg cgttcttacg ttatcagcag tgcccgctaa aaacccgcag cgccattatc
     1201 agcgcgatgc gtcaggagct gacgccgctg ctggctgctc tggcagagga gagcgccaat
     1261 gaaacgggaa tgggcaacaa agaagataaa ttcctcaaaa acaaggctgc tctggacaac
     1321 acgccgggcg tagaagatct caccaccacc gcgctgaccg gtgacggcgg catggtactc
     1381 tttgaatact cgccgtttgg cgtcatcggt tcagtcgccc caagcaccaa cccgacggaa
     1441 accatcatta ataacagcat cagcatgttg gcggcgggca atagtatcta ctttagcccg
     1501 catccgggag cgaaaaaggt ctctctgaag ctgattagtc tgattgaaga gattgccttc
     1561 cgctgctgcg gcatccgcaa tctggtggtg accgtggcgg aaccgacttt cgaagcgacc
     1621 cagcagatga tggcccaccc gcgaatcgcg gtactggcta ttaccggcgg ccccggcatt
     1681 gtggccatgg gcatgaagag cggtaagaag gtgattggcg ctggcgctgg caatccgccc
     1741 tgcatcgttg atgaaacagc ggacctggtg aaagcggcgg aagatatcat caacggcgcg
     1801 tcattcgatt acaacctgcc ctgcattgcc gagaagagcc tgatcgtggt ggagagcgtc
     1861 gccgaacgtc tggtgcagca aatgcaaacc ttcggcgcgc tgctgctaag ccctgccgat
     1921 accgacaaac tccgcgccgt ctgcctgcct gaaggccagg cgaataaaaa actggtcggc
     1981 aagagcccat cggccatgct ggaagccgcc gggatcgctg tccctgcaaa agcgccgcgt
     2041 ctgctgattg cgctggttaa cgctgacgat ccgtgggtca ccagagaaca gctgatgccg
     2101 atgctgccgg tggtaaaagt taacgatttc gatagcgcgc tggcactggc cctgaaggtt
     2161 gaagaggggt tgcatcacac cgcgatcatg cactcgcaga acgtgtcgcg cctgaacctc
     2221 gcggcccgca ccctgcaaac ctcgatattc gtcaaaaacg gcccttctta tgccgggatc
     2281 ggcgtcggcg gcgaaggctt taccaccttt accattgcca cgccaaccgg tgaaggaaca
     2341 acgtcagcgc gtacttttgc ccgctcccgg cgctgcgtgc tgaccaacgg cttttctatt
     2401 cgctaaccga ggtcgcgatg aacaccttct cactacaaac gcggttgtac agcggtcagg
     2461 gcagcctggc ggtgctcaag cgctttacca ataagcacat ctggataatc tgcgatggct
     2521 ttctggcacg ctcgccgctg ctggataccc tgtgtaacgc gctgcccgca gataaccgca
     2581 tcagcgtctt tagcgagata acgccggacc ccaccatcca taccgtggtg cagggcattg
     2641 cgcaaatgca ggccctgcag ccgcaggtgg tgattggttt tggcggcggc tcggcaatgg
     2701 acgcggcgaa agcgattgtc tggtttagcc aacaaagcgg catcaatatc gaaacctgcg
     2761 tggcgatccc gaccaccagc ggcactggtt cggaagtcac cagcgcctgc gtaattagcg
     2821 atccggataa aggcatcaag tatccgctgt tcaacaatgc gctgtatccg gatatggcga
     2881 tcctcgaccc ggagctggtg gtcagcgtac cgccgcagat taccgccaac accggcatgg
     2941 acgtgctgac cca
//
LOCUS       DAGWFR010000300         2876 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.303, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000300 DAGWFR010000000
VERSION     DAGWFR010000300.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2876)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2876)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2876
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.303"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(121..1167)
                     /gene="pyrC"
                     /locus_tag="MOX77_004566"
     CDS             complement(121..1167)
                     /gene="pyrC"
                     /locus_tag="MOX77_004566"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HCA3359937.1"
                     /translation="MTAPSQVLKIRRPDDWHVHLRDGDMLKTVVPYTSEIYGRAIVMP
                     NLASPITTVDAAIAYRQRILDAVPAGHDFTPLMTCYLTDSLDADELERGFHEGVFTAA
                     KLYPANATTNSSHGVTSVDAIMPVLERMEKLGMPLLVHGEVTHADVDIFDREARFIDT
                     VMEPLRQRLTALKVVFEHITTKDAAQYVRDGSYNLAATITPQHLMFNRNDMLVGGIRP
                     HLYCLPILKRNIHQQALRDLVASGFTRAFLGTDSAPHSRHRKETRCGCAGCFNAPSAL
                     GSYAAVFEEMNALAHFEAFCSLNGPQFYGLPVNTGWVELVRDEQQIPENIALADDSLV
                     PFLAGETVRWSVKK"
     gene            complement(1271..1870)
                     /locus_tag="MOX77_004567"
     CDS             complement(1271..1870)
                     /locus_tag="MOX77_004567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HCA3359938.1"
                     /translation="MSRLGHRQHAKERHEKVFFAAALVVSGLLVGCNQLTQYTISEQE
                     INQALEKRNNFSKDIGLPGIADAHIVLTNLASQIGREEPNKVTLTGDARLDMNSLFGS
                     QKATMKLKLKALPVFDKEKGAIYLQEMEVVDATVTPEKMQSVLQTLLPYLNQSLRSYF
                     NQRPAYVLREDSSKGEALAKKLAKGIEVKPGEIVIPFTN"
     gene            complement(1955..2602)
                     /gene="grxB"
                     /locus_tag="MOX77_004568"
     CDS             complement(1955..2602)
                     /gene="grxB"
                     /locus_tag="MOX77_004568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 2"
                     /protein_id="HCA3359939.1"
                     /translation="MKLYIYDHCPFCVKARMIFGLKNIPVELNVLQNDDEATPTRMIG
                     QKMVPILQKDDSRYLPESMDIVHYVDNLDGKPLLTGKRNPAIEEWLRKVNGYVNQLLL
                     PRFAKSAFDEFSTPAARQYFIRKKEASSGSFDNHLAHSAGLIKKIGDDLRLLDKLIVQ
                     PNAVNGELSEDDIHLFPLLRNLTLVAGIHWPTKVADYRDNMAKQTQINLLSSMAI"
     gene            complement(2666..>2876)
                     /locus_tag="MOX77_004569"
     CDS             complement(2666..>2876)
                     /locus_tag="MOX77_004569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460137.1"
                     /note="Confers resistance to norfloxacin and enoxacin;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="multidrug transporter MdtH"
                     /protein_id="HCA3359940.1"
                     /translation="YMGFSRLGLAIGGAISYIGGGWLFDMGKALAQPELPWMMLGIIG
                     FITFLALGWQFSHKRTPRRMLEPGA"
BASE COUNT          734 a          712 c          729 g          701 t
ORIGIN      
        1 ccggcaggca gaggtgacgt tttggctata gtgacttcaa tacgcataat ggccccctgt
       61 tgaatatact ggatatatat acagttaaat ccaatatata gcaacaggta agcgcatttt
      121 ttattttttt actgaccagc gtactgtttc acccgctaaa aaaggcacca gcgaatcatc
      181 agccagcgcg atattttccg gtatctgttg ttcatcgcga accagttcca cccaccccgt
      241 attcaccggc aggccataga attgcgggcc attcagtgaa cagaacgctt caaagtgcgc
      301 cagcgcgttc atttcctcaa acacggcggc ataactgcca agagcggagg gggcgttgaa
      361 acaaccggcg cagccgcaac gggtctcttt acgatgacgt gaatgcggcg ctgaatccgt
      421 ccccaggaag gcgcgcgtaa aaccactggc gaccaggtcg cgtaacgcct gctggtgaat
      481 attgcgtttc agaatcggca gacagtacag gtgaggacga atgccgccaa ccagcatatc
      541 attacggtta aacattaaat gttgaggcgt aatggtcgcc gccaggttgt agctgccgtc
      601 acgtacatac tgcgcggcat ctttggttgt gatgtgttca aagaccactt taagcgcggt
      661 cagacgctgg cgtagcggtt ccattacggt gtcgataaaa cgcgcttcgc gatcgaagat
      721 atcaacatcc gcatgggtca cctcaccgtg gaccagcaat ggcattccga gtttttccat
      781 ccgctccagt accggcatga tagcgtcgac tgacgttacg ccatgactgg agttagtggt
      841 ggcattggcc gggtaaagct tggccgcagt aaacacgcct tcatggaaac cacgctccag
      901 ttcatcggca tcgagcgaat ccgttaaata gcaggtcatt aacggcgtga aatcatgccc
      961 ggcgggcacc gcatcgagaa tacgctggcg gtaggcgatc gctgcatcaa cggtcgtaat
     1021 gggggacgcc aggttcggca tcacgatagc gcgaccataa atttcgctgg tatagggtac
     1081 gaccgttttt aacatgtcgc catcgcgaag gtgaacgtgc cagtcgtccg ggcggcggat
     1141 ctttaaaacc tgggatggtg cagtcattaa taagctccgg ctgaggaata gtctttttgc
     1201 cggaaacaaa ggataagcgg aaacgttttc gtttgcacgt aaaaaaaggg cgcgagcgcg
     1261 ccctccgaaa tcaattggtg aaaggaataa cgatttcacc aggtttaact tcaatgcctt
     1321 tcgcgagttt cttcgctaac gcttcgcctt tactactgtc ctcacgcaac acgtaagcgg
     1381 gccgctggtt aaagtagcta cgtaaagact gatttaaata gggcaggagc gtttgtagca
     1441 ctgattgcat tttctccggc gtcacggtgg cgtctactac ttccatctcc tgaagataga
     1501 tggcgccttt ttctttatca aagaccggca gggcttttag cttgagtttc atcgtcgctt
     1561 tttgactgcc aaacagggaa ttcatatcca gcctggcatc gccagtaagg gtgactttat
     1621 taggctcttc ccgaccaatc tggctggcaa ggttagtcaa tacgatatgc gcgtcggcaa
     1681 tgccaggcag accaatatct tttgagaaat tattccgttt ttcaagcgct tgattgattt
     1741 cttgttcgct aatggtgtat tgcgtaagtt gattacaacc cactaacagg ccgctaacta
     1801 ccagcgcagc ggcaaaaaaa actttttcat ggcgttcctt agcatgttgc ctgtgcccta
     1861 atcttgacac aaagcagcat gtcgcgccag cggacatggc gccactaaaa aaagctgaaa
     1921 aaggcggcaa gaaagggttg ccgcctggcg ggcgttagat agccattgag gagagtaaat
     1981 taatttgcgt ctgcttagcc atattatcgc gatagtccgc gacttttgtc ggccagtgaa
     2041 taccggcgac cagcgtcaga ttacgcagaa gcggaaacag atgaatatca tcttccgata
     2101 attcgccgtt aacggcgtta ggctgtacga tgagtttatc cagcaaacgt aaatcatcgc
     2161 cgatcttttt aatcagtccg gcagagtgcg caagatggtt gtcaaaactg ccagatgagg
     2221 cctctttttt gcggataaaa tactggcgcg ccgcaggggt agaaaattca tcgaaagcgg
     2281 attttgcaaa tcgcggcagc agtagctgat taacgtaacc gttaactttg cgcaaccact
     2341 cttcaatggc tggattacgt ttcccggtta acagcggttt gccgtcgagg ttgtcgacat
     2401 aatgtacaat atccatactt tcaggaaggt agcgactatc atctttttgc aggatgggca
     2461 ccatcttttg accaatcatc cgggtgggcg tcgcctcgtc gtcattttgt aacacgttaa
     2521 gttcaacggg gatgttcttc aggccgaaaa tcatgcgggc tttaacgcag aaagggcaat
     2581 gatcgtaaat ataaagcttc acgtttctcc tccatttgac tgtcggttcc tgaccagtat
     2641 ggaggagata gcgacaggta tcaaatcagg cgccgggttc cagcatccgg cgcggcgtgc
     2701 gcttatgact aaattgccag cctaaagcca aaaaggtgat aaagccgata ataccgagca
     2761 tcatccacgg tagttcaggc tgcgcaagcg ctttacccat atcaaacaac cagccgccgc
     2821 cgatataact aatcgcgccg ccaatggcta atcccagacg gctaaagccc atatag
//
LOCUS       DAGWFR010000301         2869 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.304, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000301 DAGWFR010000000
VERSION     DAGWFR010000301.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2869)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2869)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2869
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.304"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            368..703
                     /gene="eutS"
                     /locus_tag="MOX77_004570"
     CDS             368..703
                     /gene="eutS"
                     /locus_tag="MOX77_004570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization microcompartment
                     protein EutS"
                     /protein_id="HCA3359941.1"
                     /translation="MNKERIIQEFVPGKQVTLAHLIAHPGEELAKKIGVPDAGAIGIM
                     TLTPGETAMIAGDLAMKAADVHIGFLDRFSGALVIYGTVGAVEEALLQTVSGLGRLLN
                     FTLCELTKS"
     gene            716..1195
                     /gene="eutP"
                     /locus_tag="MOX77_004571"
     CDS             716..1195
                     /gene="eutP"
                     /locus_tag="MOX77_004571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization acetate kinase EutP"
                     /protein_id="HCA3359942.1"
                     /translation="MKRIAFVGAVGAGKTTLFNALRGNYSLARKTQAVEFNDHGDIDT
                     PGEYFSHPRWYHALITTLQDVDTLIYVHAANDKESRLPAGLLDVGTRKRHIAVISKTD
                     MPDADVAATRQLLCEIGFREPIFELNGHDPQSVRQLVDYLAALSEQEEEAGEKTYHS"
     gene            1173..1862
                     /gene="eutQ"
                     /locus_tag="MOX77_004572"
     CDS             1173..1862
                     /gene="eutQ"
                     /locus_tag="MOX77_004572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization acetate kinase EutQ"
                     /protein_id="HCA3359943.1"
                     /translation="MKKLITANDIRAAHARGEQAMSVVLRASIITPEAREVAELLGFT
                     ITECDESVPASTSAQACKSESQRIREAIIAQRPEGQFTESLVAQLMEKVLKEKQSLEL
                     GTMQPSFTSVTGKGGVKVIDGSSVKFGRFDGAEPHCVGLTDLVTEQDGSSMAAGFMQW
                     DNAFFPWTLNYDEIDMVLEGELHVRHEGETMIAKAGDVMFIPKGSSIEFGTPTSVRFL
                     YVAWPANWQSV"
     gene            1859..2656
                     /gene="eutT"
                     /locus_tag="MOX77_004573"
     CDS             1859..2656
                     /gene="eutT"
                     /locus_tag="MOX77_004573"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization cob(I)yrinic acid
                     a,c-diamide adenosyltransferase EutT"
                     /protein_id="HCA3359944.1"
                     /translation="MNDFITETWLRANHTLSEGSEIHLPADARLTPSARELLESRRLR
                     IKFLDQQGRLFVDDDEQQPVHGLTSSDTHPQACCELCRQPVVKKPDTLTHLTADKMVA
                     KSDPRLGFRAALDSAIALTVWLQIELAEPWQPWLFDIRSRLGNIMRADAIDEPLAAQS
                     IVGLNEDELHRLSHQPLRYLDHDHLVPEASHGRDAALLNLLRTKVRETETLAAQVFIT
                     RSFEVLRPDILQALNRLSSTVYVMMILSVAKHPLTVAQIQQRLGEKP"
     gene            2653..>2869
                     /locus_tag="MOX77_004574"
     CDS             2653..>2869
                     /locus_tag="MOX77_004574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HCA3359945.1"
                     /translation="MIIERARELAVRAPARVVFPDALDERVLKAAHYLQQCGLARPVL
                     VASPFALRQFALSHRMAMDGIQVIDPHS"
BASE COUNT          671 a          764 c          810 g          624 t
ORIGIN      
        1 gcgccgctgg gcttcgccat ggtatgaaag gctcgggtgg ggatattctg gaacctattg
       61 cgttacccct acttatttca ctgaatctgt actatgcaca aatcgagtga tacgcattat
      121 ttttatcaat aatagtaata caaagaatag ccggtgggta tttattgcgg aacaagctta
      181 aattcagaat gacgcctgaa aatgtgatgc accacgatat ttatcgttaa caccttcgac
      241 agaagtccct tttattttct ttctcttagt gatctacctc accttttaca tcaccttgcc
      301 gaattttgtt atttactccg acaaaaaatt gccacgatga cggcagtttc agtggagacg
      361 gtgagcaatg aataaagaac gcattattca ggaatttgtg ccgggcaaac aggtcacgct
      421 ggcgcatctc attgcgcacc ctggtgaaga actggcgaaa aagatcggcg ttcccgatgc
      481 tggcgcgatt ggcattatga ccttaacgcc gggggaaacg gccatgatcg ctggcgattt
      541 agcgatgaag gctgcggatg tacacatcgg ttttctcgac agatttagcg gcgcgctggt
      601 gatttatggc accgtcggcg cagtagaaga agcgctatta cagacggtca gcgggctggg
      661 gcgattatta aacttcaccc tgtgtgagtt aacaaaaagt taattggtgg cggtaatgaa
      721 acgtattgct tttgtcggcg cggtcggcgc cggaaagaca acgcttttta acgcgttacg
      781 gggaaattat tccctcgcca gaaaaacgca ggccgtggaa tttaatgatc atggcgatat
      841 cgatacgccg ggtgaatatt ttagccatcc ccgttggtat cacgccttaa ttaccacgtt
      901 gcaggatgtg gacacgctga tttatgtcca cgcggcaaac gataaagaaa gtcgcttacc
      961 tgccgggtta ttggatgttg gaacccgtaa acgacatatc gccgttatca gcaaaacgga
     1021 catgccggat gccgacgtcg ccgctacgcg gcagttgctt tgcgagattg gattccggga
     1081 gccgattttc gagctcaacg gccacgaccc gcaaagcgtg cggcagttgg tggattatct
     1141 ggcggctctc agtgaacagg aggaagaggc aggtgaaaaa acttatcaca gctaacgata
     1201 ttcgtgcggc ccacgcccgc ggcgaacagg cgatgtcggt agtgctgcgc gccagcatta
     1261 ttaccccgga ggctcgcgaa gtggcggaac tactgggctt cacgattacc gaatgcgacg
     1321 agtccgtccc ggcatccaca tcggcgcagg cgtgtaaaag cgaaagccag cgcattcggg
     1381 aagccatcat cgcgcagcgc ccggaagggc agtttactga aagcctggtg gcgcagttga
     1441 tggaaaaagt gctcaaggaa aagcagtcgc tggaactggg gacgatgcag ccgagcttta
     1501 cctccgtcac gggtaaaggc ggcgtgaaag tcattgacgg cagcagcgtg aaatttggcc
     1561 gcttcgacgg cgccgaaccg cactgcgtcg gcttaaccga tctggttaca gagcaggatg
     1621 gcagcagcat ggccgccggg tttatgcagt gggacaacgc ctttttcccg tggacgctga
     1681 actacgacga aatcgacatg gtgctggagg gtgaactgca cgtacgccat gaaggcgaaa
     1741 ccatgattgc caaagccgga gatgtcatgt tcatccctaa aggctccagc attgaatttg
     1801 gcacgccaac gtccgtgcgc tttctgtacg tcgcctggcc tgcaaactgg caatccgtat
     1861 gaacgatttc atcaccgaaa cgtggctcag agcgaatcat acgctcagcg aaggatcgga
     1921 aatccatctg cccgctgacg cacgactgac gccctcggcc cgggaactgc tggaaagtcg
     1981 tcgcctgcgc attaagtttc tggatcagca aggccggctg tttgtcgatg atgacgaaca
     2041 gcagccggta catggcttaa ccagtagcga tacgcaccca caggcctgct gtgaactgtg
     2101 ccgccagccg gtggtgaaaa agcccgatac gctgacccat ctgacggcgg acaaaatggt
     2161 cgccaaaagc gacccgcgcc tcggctttcg cgccgcgctc gacagcgcca tcgcgctgac
     2221 cgtgtggcta caaatcgaac tggcggaacc ctggcagccg tggcttttcg atatccgctc
     2281 gcggctgggc aacattatgc gcgccgacgc tatagatgaa ccgctggcgg cgcagtctat
     2341 cgtcgggctg aacgaggatg agctgcatcg gctttcccac cagccgctgc gctatctcga
     2401 ccacgatcac ctggtgccgg aggccagcca cggtcgcgat gcggcgctgc ttaatctgct
     2461 gcgaaccaaa gtccgcgaaa cggaaaccct cgccgcacaa gtgtttatta cccgtagttt
     2521 tgaggtcttg cgcccggaca ttttacaggc gctaaaccgt ctctccagca cggtttacgt
     2581 gatgatgatt ttgagcgtgg cgaaacatcc gctgacggtc gcccaaattc aacaacggtt
     2641 gggagagaag ccatgatcat tgaacgcgcc cgcgaactgg cggtacgcgc ccccgccaga
     2701 gtcgtctttc ccgatgcgct ggacgaacgc gtgctgaaag cggcgcatta cctgcaacag
     2761 tgcggtctgg ctcgccccgt tctggtcgcc agtccgtttg cgctgcgtca gtttgccctg
     2821 agtcatcgta tggcgatgga tggcattcag gtcatcgacc cacacagca
//
LOCUS       DAGWFR010000302         2839 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.305, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000302 DAGWFR010000000
VERSION     DAGWFR010000302.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2839)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2839)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2839
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.305"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..934)
                     /gene="menC"
                     /locus_tag="MOX77_004575"
     CDS             complement(<1..934)
                     /gene="menC"
                     /locus_tag="MOX77_004575"
                     /EC_number="4.2.1.113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate synthase"
                     /protein_id="HCA3359946.1"
                     /translation="MRSAQVYRWQIPMDAGVVLRDRRLKTRDGLYVCLRDGEREGWGE
                     ISPLPGFSQETWEEAQTALLTWVNDWLQGSEGLPEMPSVAFGASCALAELTGVLPEAA
                     DYRAAPLCTGDPDDLVLRLADMPGEKIAKVKVGLYEAVRDGMVVNLLLEAIPDLHLRL
                     DANRAWTPLKAQQFAKYVNPDYRARIAFLEEPCKTRDDSRAFARETGIAIAWDESLRE
                     ADFTFEAEEGVRAVVIKPTLTGSLDKVREQVAAAHALGLTAVISSSIESSLGLTQLAR
                     IAAWLTPGTLPGLDTLHLMQAQQVRPWPGNALPCL"
     gene            complement(934..1791)
                     /gene="menB"
                     /locus_tag="MOX77_004576"
     CDS             complement(934..1791)
                     /gene="menB"
                     /locus_tag="MOX77_004576"
                     /EC_number="4.1.3.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001641973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoyl-CoA synthase"
                     /protein_id="HCA3359947.1"
                     /translation="MIYPDETMLYAPVEWHDCSEGYTDIRYEKSTDGIAKITINRPQV
                     RNAFRPLTVKEMIQALADARYDDNVGVIILTGEGDKAFCAGGDQKVRGDYGGYQDDSG
                     VHHLNVLDFQRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAAENAIFGQTGPKVG
                     SFDGGWGASYMARIVGQKKAREIWFLCRQYDAQQALDMGLVNTVVPLADLEKETVRWC
                     REMLQNSPMALRCLKAALNADCDGQAGLQELAGNATMLFYMTEEGQEGRNAFNQKRQP
                     DFSKFKRNP"
     gene            complement(1806..2564)
                     /gene="menH"
                     /locus_tag="MOX77_004577"
     CDS             complement(1806..2564)
                     /gene="menH"
                     /locus_tag="MOX77_004577"
                     /EC_number="4.2.99.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase"
                     /protein_id="HCA3359948.1"
                     /translation="MMLHAQHMPGQPGTPSLVFLHGFSGDCREWQPVGEQFHGCSRLY
                     IDLPGHGGSAAIPVGGFADVIRLLRATLISYNILKFWLVGYSLGGRVAMMAACQGIPG
                     LCGLVVEGGHPGLQNEQARAERRLSDGRWAERFRHEPLTEVFHDWYQQPVFASLTAQQ
                     RQALTALRSQNNGETLAAMLEATSLAVQPDLREVLNALAFPFYYLCGERDSKFRALAQ
                     EVAATCHVIRNAGHNAHRENPAGVVDSLAQILRL"
     gene            complement(2561..>2839)
                     /locus_tag="MOX77_004578"
     CDS             complement(2561..>2839)
                     /locus_tag="MOX77_004578"
                     /EC_number="2.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461251.1"
                     /note="SEPHCHC synthase; forms
                     5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1-
                     carboxylate from 2-oxoglutarate and isochorismate in
                     menaquinone biosynthesis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-succinyl-5-enolpyruvyl-6-hydroxy-3-
                     cyclohexene-1-carboxylate synthase"
                     /protein_id="HCA3359949.1"
                     /translation="IVVNNNGGQIFSLLPTPQSKRERFYLMPQNVHFDHAAAMFNLRY
                     HRPENWEELESALAGAWRTPATTVIELVVNDTDGAQTLQQLLAQVSHL"
BASE COUNT          601 a          900 c          760 g          578 t
ORIGIN      
        1 tcagacaagg caacgcgtta ccaggccagg ggcgaacctg ttgcgcctgc atcagatgca
       61 aggtatccag tccgggcagc gttcccggcg tcaaccaggc ggcaatccgc gccagttgcg
      121 tcaggccgag gctggactcg atcgaagagc tgatgaccgc cgtcagtccc aacgcatggg
      181 cggcagcgac ttgctcacgc actttatcaa gcgatccggt cagcgtaggt ttgataacca
      241 cagccctgac gccctcttcg gcttcaaagg tgaaatccgc ttcgcgcaga ctttcgtccc
      301 aggcaatcgc gatgccggtt tcacgggcaa aggcgcggga atcatcccgc gtcttacacg
      361 gttcttcgag aaaggcgata cgagcgcggt aatccggatt aacatacttt gcgaactgtt
      421 gggcttttag cggcgtccag gcgcgattcg catccagacg cagatgcaga tccgggatcg
      481 cctccagcag caaattaacc accatgccgt cgcgtaccgc ttcatagaga cccactttga
      541 ccttagcgat tttctcgccg ggcatatcgg caagccgcag taccaaatcg tcaggatcgc
      601 cagtgcataa cggcgcggcg cgatagtccg ccgcctccgg caagacgcca gtcagttccg
      661 ccagcgcgca gcttgcgcca aacgcgaccg aaggcatctc cggtaatccc tcgctcccct
      721 gaagccagtc attcacccat gtcaggagcg ccgtctgcgc ctcttcccac gtttcctgac
      781 tgaagcccgg cagcggggag atctctcccc acccttcacg ctcgccgtca cgcagacaaa
      841 catacagccc gtcgcgagtt tttaaccgcc tgtcgcgcag aaccaccccc gcgtccatgg
      901 ggatctgcca gcggtatacc tgcgcgctac gcattatggg ttccgtttga atttgctgaa
      961 gtcaggctga cgcttctggt taaaggcgtt acggccttcc tgcccttctt ccgtcatgta
     1021 gaacagcatg gtagcgttgc cggccagctc ctgcagcccg gcctgaccgt cacaatcagc
     1081 attcagcgcc gctttcaggc aacgcagcgc catcggactg ttttgcaaca tttcgcggca
     1141 ccagcgcacg gtctcttttt ccagatccgc cagcggaacg acggtgttaa ccagccccat
     1201 atccagcgcc tgttgcgcat cgtactggcg gcacaggaac cagatttcac gcgctttctt
     1261 ctgaccaacg atacgcgcca tatacgaagc gccccagccg ccgtcaaagg agccgacttt
     1321 cggaccggtc tggccgaaga tggcgttttc ggccgcgatg gtcaggtcgc acatcatgtg
     1381 cagcacatga ccaccgccga tggagtaacc cgcgaccatc gcgacaaccg gttttggaca
     1441 ggtgcgaatc tggcgctgga agtccagcac attcaggtga tgcacgccgg agtcatcctg
     1501 ataaccgccg taatcgccgc gcaccttctg gtcgccgccc gcgcaaaacg ctttatcgcc
     1561 ttcgccggtc agaataatca cgcccacgtt gtcgtcgtaa cgggcatccg ccagcgcctg
     1621 aatcatctct ttgacggtca acggacgaaa tgcattgcgc acctgcggac gattaatggt
     1681 gatttttgca ataccgtcgg tggatttttc ataacgaatg tcggtgtaac cctccgagca
     1741 gtcgtgccat tctaccggtg cgtaaagcat tgtttcatca ggatagatca tagtgtgtcc
     1801 tttagtcaga gacgcagaat ctgagccaga ctgtctacca cgccagcggg gttttcccgg
     1861 tgcgcgttgt gtccggcgtt acgaatgaca tggcatgtcg ccgccacttc ctgcgccagg
     1921 gcgcggaatt tgctgtcgcg ttcgccacat aaataataaa acggaaatgc cagcgcgtta
     1981 agcacctcgc gtaaatccgg ctggacggca agcgatgtcg cctccagcat cgcagccagc
     2041 gtttcgccgt tattctggct acgcagcgcc gttagcgcct gcctttgctg cgccgtcagc
     2101 gaggcgaaca ccggctgctg ataccagtcg tgaaaaacct cagtcaaggg ttcatgacga
     2161 aaacgctctg cccagcgccc gtcggacaat cgtctttcag cgcgcgcctg ttcattttgc
     2221 agccccggat gaccgccttc gaccaccagg ccgcacaggc cgggtattcc ctggcaggct
     2281 gccatcatcg ccacacggcc gccaagggag tatcccacca accaaaactt tagtatgttg
     2341 taactaatta acgtggcgcg cagtaatctg atgacatcgg caaagccgcc gaccggaata
     2401 gccgcagatc cgccatgtcc tggtaagtca atataaagcc gcgaacagcc gtgaaactgt
     2461 tcgccaaccg gctgccattc gcggcaatcg ccagaaaaac cgtgcaggaa aaccagcgag
     2521 ggcgtcccag gctgtccggg catgtgctgc gcgtgcaaca tcatagatgg cttacctgag
     2581 ccaaaagttg ctgcagcgtc tgcgcgccat ccgtatcgtt taccaccagc tcaatcaccg
     2641 ttgtcgccgg ggttcgccac gcgccagcca gcgcagactc cagttcttcc cagttttccg
     2701 ggcgatgata gcgcaggtta aacatggcgg ccgcatggtc aaaatggacg ttttgcggca
     2761 tcagataaaa gcgctcacgc ttactttgcg gcgtcggcag cagggaaaag atctgcccgc
     2821 cgttattgtt gaccacaat
//
LOCUS       DAGWFR010000303         2814 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.306, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000303 DAGWFR010000000
VERSION     DAGWFR010000303.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2814)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2814)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2814
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.306"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..258)
                     /locus_tag="MOX77_004579"
     CDS             complement(<1..258)
                     /locus_tag="MOX77_004579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008456064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HCA3359950.1"
                     /translation="MQEQYRPEEIESKVQLHWDEKRTFEVTEDESKEKYYCLSMLPYP
                     SGRLHMGHVRNYTIGDVVARYQHMLGKNVLQPIGWDAFGLPA"
     gene            495..836
                     /locus_tag="MOX77_004580"
     CDS             495..836
                     /locus_tag="MOX77_004580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_447100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UxaA family hydrolase"
                     /protein_id="HCA3359951.1"
                     /translation="MARLLIREDRTKAKELIVKKNAVVIHPQDCVATAITALKAGETA
                     TMFIGEREISVVLHQDVPFGHKFAICDVPFHGEVYKYGESIGRATQEIKSGDYVHVHN
                     VESERGRGDWK"
     gene            853..2025
                     /locus_tag="MOX77_004581"
     CDS             853..2025
                     /locus_tag="MOX77_004581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_447101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UxaA family hydrolase"
                     /protein_id="HCA3359952.1"
                     /translation="MIMSNETFLGFRRPDGRFGIRNYVLILPTSVCANKVAQDIARQV
                     KGATWVNNDFGCCQVAGDARLTEKTLINVANNPNVGAIVVVGLGCEGAEPLRIAEEIT
                     AFGKPTSCITIQEEGGTLKCQARGISLARDYAQQLSMQKPQQAPVSELLLAMECGGSD
                     TTSGLASNPSCGVASDKLIRCGGSSILSETTEFIGAEHVMAKRAVTPEVGQQLIDLVV
                     GCEARAKALGEDIRGGQPTPGSIKGGLTTIEEKSLGCMHKAGHAPLQGVLEYADSPTH
                     PGLWIMDTPGQDIESISGMVAGGAQIVIFTTGRGTPAGNPIAPVIKITGNKATWEMMQ
                     DNIDIDVSAIMSGEASITQMGEEIYQEILRVANGKTTKSEDLGHNEFSIYKIAPTF"
     gene            2075..>2814
                     /locus_tag="MOX77_004582"
     CDS             2075..>2814
                     /locus_tag="MOX77_004582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-keto-3-deoxygluconate permease 2"
                     /protein_id="HCA3359953.1"
                     /translation="MKIKKTLERFPGGMMVVPLIIGALFKTFAPEALEIGGFVISISH
                     GAMAILGMFLVCMGADIQFKAAPKALKKGAAITFAKFASGVIIGILVGKFCGPDGLLG
                     LSALAIISAMTNSNSGLYAALVGEYGDETDGGAIAVISLNDGPFFTMLALGSAGMVSI
                     PFMNLVAVIIPIIIGMILGNLDEDMRKFLKQGSVVTIPFFAFGLGYSIDFARLITAGS
                     SGILLGLMTVAIGGFFNIFADRVTGGSGV"
BASE COUNT          687 a          615 c          812 g          700 t
ORIGIN      
        1 cgccggcagg ccgaaggcgt cccagccgat tggctgcagc acgtttttgc ccagcatatg
       61 ctggtagcgg gcaaccacgt cgccgatggt gtagttacgt acgtggccca tgtgtagtcg
      121 gccagaagga tagggaagca tcgacaggca gtaatacttc tctttgctct cgtcttcggt
      181 cacttcaaat gtgcgcttct catcccagtg aagctgtact ttggattcta tctcttccgg
      241 gcggtattgc tcttgcatgg cagccagtag tcctgttttc gatacagcta caaatgtagc
      301 tttagaggtg gtgtttagat ccgcatagca tagcccaaac acgcacgtca aaacaggggg
      361 tagaacattt gtcgcgctag gcgttcatga ggaggtgacg caaaatgcga cacgactgag
      421 gcaaattacc gcagttcctg tcaccgccag atcggcctgt aaaaataaag tcatataaac
      481 catgcagtta aaaaatggca cgccttttga ttagggaaga caggactaaa gcaaaggagt
      541 taatcgtgaa aaaaaatgca gtggtgattc accctcagga ttgcgtcgcg acggctatta
      601 cggcgctcaa ggccggcgaa accgccacaa tgttcattgg cgaacgcgag ataagcgttg
      661 tgttacatca ggatgtgcca tttggccaca aattcgccat ctgcgatgtg ccttttcatg
      721 gcgaagttta taaatatggc gaatccattg gccgcgccac tcaggaaata aaaagtggcg
      781 actatgtgca cgtccacaat gtggaaagcg aacgcggacg tggtgactgg aaataatata
      841 aaacaaggga aaatgattat gagcaatgag acttttttgg gtttccgacg ccctgacggc
      901 cgttttggca tccgtaatta tgtactgatt ttacctacca gcgtttgtgc gaataaagtt
      961 gcccaggata ttgcccggca ggtaaaaggt gcgacatggg tgaataacga ttttggctgc
     1021 tgccaggtgg caggcgatgc gcgtctgacg gaaaagacat tgattaatgt ggcgaataat
     1081 cccaacgtcg gcgctattgt ggttgtgggc ttaggctgtg aaggcgcgga gccgctgcgc
     1141 atcgcagaag agattaccgc atttggcaaa ccgacctcct gcattaccat tcaggaagag
     1201 ggcggcacgc ttaaatgtca ggccaggggg atttcgctgg cccgcgacta tgcgcaacaa
     1261 ctctccatgc aaaaaccgca gcaagcaccg gttagcgagc tgctgctggc gatggagtgc
     1321 ggcgggtcag atacgacatc ggggctggcg tctaaccctt cctgcggggt cgcctcggat
     1381 aagctgatac gctgcggcgg aagctcaatt ctttctgaaa cgacggaatt tattggcgcc
     1441 gagcatgtga tggcgaaacg cgcggtgacg ccggaggttg gtcaacagct cattgattta
     1501 gtggtcggct gtgaggcgcg agcaaaagcg ctgggcgagg atattcgcgg gggacagccg
     1561 acgccgggca gtattaaagg cgggctgact accattgaag aaaaatcgtt aggttgtatg
     1621 cataaagcgg gtcatgcgcc gctacagggc gtactggaat atgccgatag tccaacgcat
     1681 ccgggcctgt ggattatgga taccccaggg caggatattg aatctatttc cggcatggtg
     1741 gcgggtggag cgcagatcgt tatttttact accggtcgcg gaacgcctgc cggtaaccca
     1801 atagcgccgg taataaaaat tacgggtaat aaagcaacgt gggaaatgat gcaggacaat
     1861 attgatattg atgtgtccgc cattatgtct ggcgaggctt ctattacgca aatgggcgag
     1921 gaaatttatc aggaaatttt acgcgtcgcg aatgggaaaa cgactaaatc agaagattta
     1981 ggtcataacg aattctctat ttataagatc gcgccgacgt tctgatacca aatcgggcag
     2041 cacaagctgt ccggttatct cctgggaata agctatgaaa attaaaaaaa cactggaacg
     2101 ttttcctggt ggtatgatgg ttgtaccgct gatcatcggc gccttgttta aaacttttgc
     2161 gccggaggcg ctggaaatag gcggttttgt catctctatt tcgcatggcg caatggcgat
     2221 tttaggcatg tttttagtct gtatgggcgc ggatatccag tttaaagccg cgccgaaagc
     2281 gttgaaaaaa ggcgctgcga tcacctttgc gaaatttgcc agcggcgtga ttattggcat
     2341 tctggtcggg aaattttgcg gcccggatgg gttattaggt ctgtcggctt tagcgattat
     2401 ttcggcgatg accaactcga acagtgggtt atatgccgcg ttggtggggg agtacggcga
     2461 tgaaaccgac ggcggcgcga ttgcggtaat atcgttgaac gatggtccct ttttcaccat
     2521 gctggcgtta ggatcggcag gcatggtgtc gatacccttt atgaatctgg tggcggttat
     2581 tattcccatt atcattggca tgattttggg caatctggat gaggacatgc gcaagtttct
     2641 taaacagggc agcgtggtaa cgattccctt ttttgccttt gggttaggat acagtattga
     2701 tttcgcaaga cttatcacgg caggttcttc aggcatttta ctgggactca tgacggtggc
     2761 gattggcgga ttttttaata ttttcgccga tcgtgtgacg ggaggcagcg gcgt
//
LOCUS       DAGWFR010000304         2804 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.307, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000304 DAGWFR010000000
VERSION     DAGWFR010000304.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2804)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2804)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2804
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.307"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..294
                     /locus_tag="MOX77_004583"
     CDS             <1..294
                     /locus_tag="MOX77_004583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase, iron-sulfur-dependent,
                     subunit alpha"
                     /protein_id="HCA3359954.1"
                     /translation="LGGSPAQVCIAAEIAMEHNLGLTCDPVAGQVQIPCIERNAINAV
                     KAVNAARMALRRTSEPRVSLDKVIETMYETGKDMNDKYRETSRGGLAIKVVCG"
     gene            609..887
                     /locus_tag="MOX77_004584"
                     /pseudo
     CDS             609..887
                     /locus_tag="MOX77_004584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004985905.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            987..1939
                     /locus_tag="MOX77_004585"
                     /pseudo
     CDS             987..1939
                     /locus_tag="MOX77_004585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004985932.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation protein"
     gene            1965..>2804
                     /locus_tag="MOX77_004586"
     CDS             1965..>2804
                     /locus_tag="MOX77_004586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine dehydratase subunit alpha family protein"
                     /protein_id="HCA3359955.1"
                     /translation="MFESKINPLWQSFILAVQEEVKPALGCTEPISLALAAAAAAAEL
                     DGTVERIDAWVSPNLMKNGMGVTVPGTGMVGLPIAAALGALGGDAKAGLEVLKDASAK
                     AVADAKAMLAAGHVAVMLQEPCNDILFSRAKVYSGDSWACVTIVGDHTNIVRIETDKG
                     VVFTQADNAQEEEKTSPLGVLSHTSLEEILAFVNAVPFDAIRFILDAARLNGALSQEG
                     LRGSWGLHIGSTLAKQCDRGLLAKDLSTAILIRTSAASDARMGGATLPAMSNSGSGNQ
                     GITA"
BASE COUNT          639 a          663 c          779 g          723 t
ORIGIN      
        1 ctgggcggca gcccggcgca ggtctgtatt gcggcggaaa ttgcgatgga gcataacctt
       61 ggcctcacct gtgacccggt ggcgggtcag gtgcaaatcc cttgtattga acgtaatgcg
      121 attaacgccg ttaaagcggt aaatgcggcg cgaatggcgc tacgccgtac ctctgagccg
      181 cgggtttcgc tcgataaagt gatcgaaacc atgtacgaaa cgggtaaaga catgaacgac
      241 aaatatcgcg agacgtcgcg cggcggtctg gcgattaaag tcgtttgtgg ataggcccga
      301 caggcgcaga gtgagcaggc tatgggataa cgcagaagac agaagctgag aaaagggcgc
      361 accaaagtgc gccctttttt gttgtgatac gcgtcaaata gagaaaataa caatattaaa
      421 taaatagtaa atagaaaata attcttaacc cacaagaaat gcaggcgttt tattggtaag
      481 tttttctctt atcgtgcgcg tatgattttc ttattacaag aaagtacctg cacctcacgt
      541 tctgcatatc gccttgctgc ggcacgaaaa ataaaaaaac ctctacctac acattgagcg
      601 agaattttat ggaatcggct agtaatacca gcgtaatcct cgacgcatca gccccggcgc
      661 gtcgggcagg gatgacagaa agcgaatggc gtgaagccat caaatttgat agtaccgaca
      721 ccggctgggt cattatgagt atcgggatgg cgatcggcgc agggatcgtt tttcttcctg
      781 tctaggttgg cctgatggga ctttgggtct ttttactctc ttctattatt ggttatccgg
      841 ccatgtacct gttccagcgg ctgtttatta atacgctggc ggaatccccg gaatgtaaag
      901 actaccccag cgtgatcagc ggctatctgg gcaaaaactg gggtatttta ttaggcgcgc
      961 tgtactttgt gatgctcgtc atctggatgt tcgtctattc tacggcgatt actaacgaca
     1021 gcgcctctta tctgcatact ttcggcgtaa cggaaggatt actttccgat agtccatttt
     1081 atggtctggt gctgatctgc atcctggtgg cgatttcctc acgcggtgaa aaattactgt
     1141 tcaaaatttc caccggcatg gtgctgacca agctactggt agtggcggcg ctgggcgtct
     1201 ctatggtggg tatgtggcat ctgtataaca ttggcgcgct gccgccgatg gccctgctga
     1261 ttaaaaacgc cattattacc ctgccattta cgctgacctc gattttattt atccagacgt
     1321 taagcccaat ggtgatctct taccgttcac gcgaaaaatc tattgaggtc gcacgccata
     1381 agcgctgcgc gccatgaata tcgcgtttgg catcctgttc gttaccgtct ttttctatgc
     1441 ggtttccttc accctggcga tggggcatga cgaagcggtg aaagcctacg agcagaatat
     1501 ttccgccctg gcgatcgccg cgcaatttat tagcggcgat ggcgctagct gggtcaaagt
     1561 ggttagcgta attctgaaca tctttgccgt catgaccgcc ttctttggcg tttatttagg
     1621 attccgcgaa gcgacgcaag gcattgtgat gaatatcctg cgccgcaaaa tgcccgccga
     1681 gaagattaag gaaaatctgg tacagcgcgg cattatgatt ttcgctattt tgctggcctg
     1741 gagcgccatt gtgctcaacg cgccggtact gagcttcacc tctatttgta gccctatctt
     1801 cggtatggtg ggctgtttaa ttccggcatg gttggtctac aaggttcccg cattgcacaa
     1861 atataaaggc gcttcgttgt acctgattat tattaccggt ctgctgctat gcgtttctcc
     1921 gttcctggca ttctcttgat atacctgaga ttaaggttgt tgttatgttt gaatctaaaa
     1981 taaatccatt gtggcaaagt tttatcctgg ccgtacagga agaagtaaaa ccggcgctgg
     2041 ggtgtactga gccaatttca ctggcgctgg cagcagcggc ggcggcggct gaacttgacg
     2101 gcacagttga acgcattgac gcgtgggttt cgcctaatct gatgaaaaat ggtatgggcg
     2161 ttaccgttcc aggaacggga atggtagggc taccgatcgc cgcggcgctt ggcgcgttgg
     2221 gcggtgatgc gaaagccggg ttggaggtgt taaaagacgc ttccgctaaa gccgttgccg
     2281 atgcaaaagc gatgctggcc gccggacatg ttgcagtgat gttgcaggag ccatgtaacg
     2341 atatcctgtt ttcacgggcg aaagtgtata gcggcgatag ctgggcatgt gtcacgatcg
     2401 tcggcgatca tacaaatatt gtgcggatag aaaccgacaa gggcgtggta tttacccaag
     2461 ccgataatgc gcaggaagaa gaaaaaacct cgccactggg agtgctgtct catacctcgc
     2521 tggaagagat cctggcgttt gtgaatgcgg tgccctttga cgctatccgc tttattctcg
     2581 atgcggccag gctaaacggc gcgttgtcgc aggagggctt gcgtggttcc tgggggctgc
     2641 atattggttc gacgctggcc aaacagtgcg atcgcggtct gctggcgaaa gatctctcca
     2701 cggcgatttt gatccgtacc agcgcggcgt cagacgccag aatgggcggt gccacgttgc
     2761 ccgcgatgag caactccggc tccggcaacc aggggattac cgcc
//
LOCUS       DAGWFR010000305         2793 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.308, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000305 DAGWFR010000000
VERSION     DAGWFR010000305.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2793)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2793)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2793
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.308"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..71)
                     /locus_tag="MOX77_004587"
     CDS             complement(<1..71)
                     /locus_tag="MOX77_004587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4440 domain-containing protein"
                     /protein_id="HCA3359956.1"
                     /translation="MNPYKEEIIHAHAAIENWLSKGGG"
     gene            complement(68..1276)
                     /locus_tag="MOX77_004588"
     CDS             complement(68..1276)
                     /locus_tag="MOX77_004588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3359957.1"
                     /translation="MTYRSKVAVVYLLGFFLDLINLFIASVAFPAMSVDLHTSISALA
                     WVSNGYIAGLTLIVPFSAFLSRYLGARRLIIFSLILFSVAAAAAGFADSLHSLVFWRI
                     VQGAGGGLLIPVGQALTWQQFKPHERAGVSSVVMMVALLAPACSPAIGGLLVETCGWR
                     WIFFATLPVAVLTLLLAYRWLNVASTTMASARLLHLPLLTDKLLRFAMIVYLCVPGMF
                     IGISVVGMFYLQNVAQLSPAAAGSLMLPWSIASFVAIMLTGRYFNRLGPRPLIIVGCL
                     LQAAGILLLTNVTPATSHRVLMMIFALMGAGGSLCSSTAQSGAFLTIARRDMPDASAL
                     WNLNRQLSFFLGATLLTLLLNALQRVMSLEVAYRWTFIAAAGITLLPLIYAVCLNNRQ
                     ALLCLKKERS"
     gene            1364..2296
                     /locus_tag="MOX77_004589"
     CDS             1364..2296
                     /locus_tag="MOX77_004589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000216314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCA3359958.1"
                     /translation="MTVKELAMLNLQRMSLFVAVVDSGSFTAAAAASGQTKAVVSFNI
                     RQLEKELGVTLLLRSTRRLTLTDAGVLFYQKGVNLLNAAKNLQDEVRASHSGLGGELR
                     ITTTPEFGEQVVIPVLAQFSQRHPDLRIRHMSSSHHADLIAERFDVAIRLGSLADSRY
                     RAALISRFTILPVAAPQWLARHPVSSLESLAQAEWIIHERLPTPLRWTVTNNHGQHSR
                     LEISKAGKISVDSARSLMAFALAGSGVALLPQWLVNTALEDGTLIHVLPDYHFPRQGI
                     YAVYPDARHVSTKVRAFIDFLRSQWDCGEHAPSL"
     gene            complement(2338..>2793)
                     /locus_tag="MOX77_004590"
     CDS             complement(2338..>2793)
                     /locus_tag="MOX77_004590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntP family permease"
                     /protein_id="HCA3359959.1"
                     /translation="QVANLPISPILIPFIVATLVRLIQGSGTVAMITAASISAPILAQ
                     IPGINMLLAAQAATMGSLFFGYFNDSLFWVVNRMMGVSDVKQQMVVWSVPTTIAWAIG
                     GTGVALINLLFGSGGSWLDPLLPIVVLAAIMLWVRWQAQGIKDKLVVKD"
BASE COUNT          723 a          806 c          726 g          538 t
ORIGIN      
        1 ccccccccct tactaagcca gttctcaatc gccgcatggg catgaataat ttcttcttta
       61 tatggattca tgatctttcc tttttcaggc acagaagcgc ctgtctattg tttagacaga
      121 cagcgtaaat aaggggcagc agggtgatac cggcggcggc aataaaggtc cagcgataag
      181 caacctcaag cgacataacg cgctggagcg cgtttaacag cagcgtcaac agcgtcgcgc
      241 caaggaaaaa gctaagctga cgattaagat tccatagcgc gctggcgtca ggcatgtccc
      301 ggcgagcaat agtcaggaaa gcgccactct gcgcggtact gctgcacaaa ctgccgccag
      361 cgcccattaa ggcgaatatc atcatcagta cacgatgcga tgtcgcaggc gtaacgttag
      421 ttaaaagcag tatccctgca gcctgaagaa gacagccgac gataatcagc ggacgcggcc
      481 caagccgatt gaagtaacgt ccggtaagca taatggcgac aaatgaagcg atcgaccagg
      541 ggagcatcag cgaccccgcc gccgcaggcg atagctgcgc gacgttctgt agataaaaca
      601 tcccgaccac gctgatacca atgaacatac ccggcacaca cagatagacg atcatggcaa
      661 aacgcagcag cttgtccgtc aacaacggca gatggagcaa tcttgctgac gccattgtcg
      721 tcgaagcgac gttcagccaa cgataagcga gcaataaagt gagaacggcc accggcagcg
      781 tggcaaaaaa tatccagcgc cagccgcacg tttccaccag cagcccgcca atcgcaggcg
      841 aacatgccgg cgccagtagc gccaccatca tgacgaccga tgacacgcca gcgcgttcat
      901 gcggtttaaa ctgttgccag gttaacgcct gaccaaccgg gatcaataag ccaccgcccg
      961 ccccctgcac aatacgccag aaaacaaggc tgtgtaagga atcggcaaaa cctgcggcag
     1021 cggcggcaac gctaaacaga atgagcgaaa atatgatcag ccgtcgtgcg ccgagataac
     1081 gtgaaagaaa cgcgctaaac ggaacgatca gcgttaatcc tgcgatataa ccgttactca
     1141 cccatgccag cgccgatatg gacgtatgca gatccacgga catcgcagga aaagccacgc
     1201 tggcaataaa cagattaatc agatcaagaa agaagccgag caggtaaacc actgccactt
     1261 tactgcgata cgtcattatg catcctccgt cagaggcgct aatgtagccg tccggagaaa
     1321 gccagataag tccgcgcttc aacgatatac tgtcaaaata attttgacag taaaggagct
     1381 cgccatgctc aatttgcagc gtatgtcgct gtttgtcgcc gtggtagata gcggcagctt
     1441 cacggcggcg gccgccgcat cgggccaaac aaaagcggta gtgagtttta atattcggca
     1501 gcttgaaaaa gagcttggcg taacgttact gctacgttcc acccgacgac tgacgctcac
     1561 agacgccggc gtcctctttt accaaaaagg cgtgaattta ctcaatgcag cgaaaaattt
     1621 gcaggatgaa gtgcgtgcca gccatagtgg gctgggcggc gagttacgta ttaccactac
     1681 gcccgagttt ggcgaacagg tggtcattcc ggtactggcg cagtttagtc agcgccatcc
     1741 cgatctccgt attcggcata tgtcctcatc acatcatgcc gatttaattg ccgagcgctt
     1801 tgatgtggcg attcggcttg gctcgctggc ggactcccgc tatcgcgccg cgctgatatc
     1861 ccgctttacc attctgccgg tcgccgcgcc gcagtggctc gcccgccacc ccgtgtcgtc
     1921 actggagtcg ttggcccagg cggaatggat tattcatgag cgattaccta cgccgctacg
     1981 gtggacagta acgaataatc atggccaaca ctcacgcctg gagataagca aagccggcaa
     2041 aatttctgtc gacagcgcgc gctcgctgat ggccttcgct ctcgcgggaa gcggcgtcgc
     2101 attactgccg caatggttag tcaacaccgc actggaggat ggaacgttaa ttcacgtgtt
     2161 acccgactat cattttcccc gtcagggcat ttatgccgtt tatccagacg cccgccatgt
     2221 atcgacaaaa gtacgcgcat ttattgattt tttacgttcg caatgggatt gcggggagca
     2281 cgccccatca ttgtagccag cccgggagca ttgcgctccc ggacggataa taccgtctta
     2341 atccttaact accagtttgt ctttgatccc ctgcgcctgc caacgcaccc acagcataat
     2401 tgccgccaga acgacgattg gcagtaacgg atcgagccaa ctgccgccgg aaccaaacag
     2461 caggttaatc agcgccacgc cggtgccgcc aatcgcccag gcaatggtcg tcggtacaga
     2521 ccaaaccacc atctgctgtt tgacatcaga gacgcccatc atgcggttaa ccacccagaa
     2581 caggctatcg ttgaagtagc cgaaaaacag cgaccccatc gttgcggcct gagcggcaag
     2641 caacatattg atgccgggga tctgcgccag gatcggcgcg gaaatcgagg cggcagtgat
     2701 catcgccacc gtccccgatc cctgaatcag acgtaccagc gtcgccacga taaacgggat
     2761 caggatcggc gagatcggca ggttggcaac ctg
//
LOCUS       DAGWFR010000306         2770 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.309, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000306 DAGWFR010000000
VERSION     DAGWFR010000306.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2770)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2770)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2770
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.309"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..806
                     /locus_tag="MOX77_004591"
     CDS             <1..806
                     /locus_tag="MOX77_004591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HCA3359960.1"
                     /translation="FTGGTATGRNIMKNAGLKKYSMELGGKSPVLIFEDADIERALDA
                     ALFTIFSINGERCTAGSRIFIQQSIYPEFVKRFAERANRLRVGDPTDPNTQVGALISQ
                     QHWEKVSGYIRLGIEEGATLLAGGAEKPTDLPAHLKGGNFLRPTVLADVDNRMRVAQE
                     EIFGPVACLLPFKDEAEGLRLANDVEYGLASYIWTQDVSKVLRLARGIEAGMVFVNTQ
                     NVRDLRQPFGGVKASGTGREGGEYSFEVFAEMKNVCISMGDHPIPKWGV"
     gene            808..1659
                     /gene="hpaD"
                     /locus_tag="MOX77_004592"
     CDS             808..1659
                     /gene="hpaD"
                     /locus_tag="MOX77_004592"
                     /EC_number="1.13.11.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxyphenylacetate 2,3-dioxygenase"
                     /protein_id="HCA3359961.1"
                     /translation="MGKLALAAKITHVPSMYLSELPGKNHGCRQAAIDGHIEIGKRCR
                     EMGVDTIIVFDTHWLVNSAYHINCADHFQGVYTSNELPHFIRDMTYDYDGNPALGHLI
                     ADEAVKLGVRAKAHNIPSLKLEYGTLVPMRYMNSDKHFKVVSISAFCTVHDFADSRKL
                     GEAILKAIEKYDGTVAVFASGSLSHRFIDDQRAEEGMNSYTREFDHQMDERVVKLWRE
                     GKFKEFCTMLPEYADYCYGEGNMHDTVMLLGMLGWDKYDGKVEFITDLFASSGTGQVN
                     AVFPLPA"
     gene            1669..2049
                     /locus_tag="MOX77_004593"
     CDS             1669..2049
                     /locus_tag="MOX77_004593"
                     /EC_number="5.3.3.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-carboxymethyl-2-hydroxymuconate
                     Delta-isomerase"
                     /protein_id="HCA3359962.1"
                     /translation="MPHFIAECTENIREQADLPSLFSKVNEALAATGIFPIGGIRSRA
                     HWLDTWQMADGKHDYAFVHMTLKIGAGRSLESRQEVGEMLFGLIKAHFADLMENRYLA
                     LSFEIAELHPTLNYKQNNVHALFK"
     gene            2193..>2770
                     /locus_tag="MOX77_004594"
     CDS             2193..>2770
                     /locus_tag="MOX77_004594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo-hepta-3-ene-1,7-dioic acid hydratase"
                     /protein_id="HCA3359963.1"
                     /translation="MLDKQTHTLIAQRLNQAEKQREQIRAVSLDYPNITIEDAYAVQR
                     EWVNIKIAEGRTLKGHKIGLTSKAMQASSQISEPDYGALLDDMFFHDGGDIPTDRFIV
                     PRIEVELAFVLAKPLRGPHCTLFDVYNATDYVIPALELIDARSHNIDPETQRPRKVFD
                     TISDNAANAGVILGGRPIKPDELDLRWISALL"
BASE COUNT          648 a          780 c          786 g          556 t
ORIGIN      
        1 cgtttaccgg cggtaccgcc accggtcgca atatcatgaa aaatgccggg ctgaaaaaat
       61 actcgatgga gctgggcggc aaatcgccgg tgctgatttt tgaagacgcc gacattgagc
      121 gcgcgctgga cgccgcgctg ttcaccatct tctcgatcaa cggcgaacgc tgcaccgctg
      181 ggtcgcgcat ctttatccag cagagcattt accctgagtt cgtgaagcgc tttgccgaac
      241 gcgcgaatcg cctgcgtgtc ggcgatccga ccgacccgaa cacccaggtc ggcgcgctga
      301 ttagccaaca gcactgggag aaagtctccg gttatatccg cctcggcatt gaagaggggg
      361 caacgctgct ggcgggcggt gcggaaaaac ccactgacct gcctgcgcat ctgaaaggcg
      421 gtaacttcct gcgcccaacc gtgctggccg atgtcgacaa ccgtatgcgc gttgcgcagg
      481 aagagatctt tgggccggtc gcctgcctgc tgccattcaa agacgaagcg gaagggttac
      541 gtttggcgaa cgatgtggaa tacggtctgg cctcttatat ctggacccag gacgtgagca
      601 aagtgttgcg cctggcgcgt gggattgaag ccggcatggt cttcgtcaac acccagaacg
      661 tccgcgacct gcgccagccg ttcggcggcg tgaaagcctc cggtaccggg cgcgaaggcg
      721 gcgaatatag cttcgaagtg tttgcggaaa tgaaaaacgt ctgcatctca atgggcgacc
      781 atcctatccc aaaatgggga gtttgatatg ggcaagttag cgttagcagc aaaaattacc
      841 cacgtgccgt cgatgtatct ttctgaactg ccaggaaaaa atcacggttg tcgtcaggca
      901 gccattgatg ggcatattga aattggcaag cgttgccgcg aaatgggcgt tgacaccatt
      961 atcgtattcg acacccactg gctggtgaat agcgcttacc acattaattg tgccgaccat
     1021 ttccagggcg tctataccag caacgaattg ccgcacttta ttcgcgacat gacctatgac
     1081 tatgacggta atccggcgct cggccatctg atcgccgacg aggcggtcaa actgggcgtg
     1141 cgcgccaaag cgcacaacat cccgagcctg aagctggagt atggcacgct ggtgccgatg
     1201 cgctacatga acagcgacaa gcacttcaaa gtggtctcca tctcggcgtt ctgcactgtg
     1261 catgattttg ccgacagccg caaactgggc gaagccattc tcaaggcgat tgagaaatat
     1321 gacggtaccg tagcggtatt cgccagtggt tctctgtcgc accgttttat tgacgaccaa
     1381 cgggcggaag aggggatgaa cagctacacc cgcgagttcg atcatcaaat ggacgagcgc
     1441 gtggtcaagc tgtggcgcga aggcaaattc aaggagtttt gcaccatgtt gccggagtac
     1501 gccgactact gctacggcga aggcaacatg cacgacacgg tcatgctact gggaatgctg
     1561 gggtgggaca aatacgacgg caaggtggag ttcatcaccg acctgttcgc cagctccggt
     1621 accggccagg taaacgctgt tttcccgctg cctgcgtaag gggggtttat gccgcacttt
     1681 attgctgaat gtactgaaaa tattcgcgag caggctgatt taccaagcct gttcagcaag
     1741 gtaaacgagg cgctggccgc caccgggatt ttccccatcg gcggtatccg cagtcgcgcc
     1801 cactggctgg atacctggca gatggctgac ggtaagcatg attacgcgtt tgtgcatatg
     1861 acgctgaaaa tcggcgccgg gcgcagcctg gagagccgtc aggaagtcgg cgaaatgctg
     1921 tttgggctga ttaaagccca cttcgccgac ctgatggaga accgctatct ggcgctgtcg
     1981 tttgagattg ccgagttaca tccaacgctc aattacaaac aaaacaacgt acacgcgtta
     2041 tttaaatagc acactctttc gcccggtggc gctgcgctga ccgggcctac aaaaaaacga
     2101 tgcacgaagc agtaccgaac cgtaggccgg gtaagacgca cccgcgtcgc cacccggcgc
     2161 agcagcaccg aatgaggtaa caggaagcaa ctatgctcga taaacagacc cataccctga
     2221 tcgctcagcg acttaatcag gctgaaaaac agcgtgaaca gattcgcgca gtgtcgctgg
     2281 attatcccaa catcactatt gaagatgcct atgccgtaca gcgtgaatgg gtcaatatca
     2341 agattgccga agggcgcacg ctcaaaggcc acaaaatcgg cctgacctca aaagcgatgc
     2401 aggccagctc gcaaatcagc gaaccggatt acggcgcgct gcttgacgat atgttcttcc
     2461 atgacggcgg agatatcccc accgaccgtt ttatcgtccc gcgtattgaa gtggagctgg
     2521 cgttcgtgct ggcgaaaccg ctgcgcggcc ctcactgcac gctgttcgac gtctacaacg
     2581 ccacggatta tgtgattccg gcgctggaac tgattgacgc ccgcagccac aacatcgacc
     2641 cggaaaccca gcgcccgcgc aaagtgttcg acaccatttc cgacaacgcc gccaacgccg
     2701 gggtgatcct cggtggtcgc cccatcaaac cagacgagct ggatctgcgc tggatctccg
     2761 cgctgctcta
//
LOCUS       DAGWFR010000307         2722 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.310, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000307 DAGWFR010000000
VERSION     DAGWFR010000307.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2722)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2722)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2722
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.310"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..300
                     /locus_tag="MOX77_004595"
     CDS             <1..300
                     /locus_tag="MOX77_004595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysB family phage lysis regulatory protein"
                     /protein_id="HCA3359964.1"
                     /translation="LTKKNSQLIGLSILTETNSREQTRLYAAAEQTTALLRSRQRRIE
                     ELKSENEDLRRWADTPLPADIIRLRDRPALAGGAAYREWLSQSDAVPPGKVSAAQ"
     gene            396..827
                     /locus_tag="MOX77_004596"
     CDS             396..827
                     /locus_tag="MOX77_004596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCA3359965.1"
                     /translation="MNKPQSLRSALNKVVAYVRDNPDKLHLFVDNGSLVATGASSMSW
                     EYRYTLNVVIEDFSGDQNLLMAPVLLWLSTSQPDAINNPDLREKLFTFEVDILRNDVC
                     DISMNLQLTERVLVSTDGSVSSVEAVPEPDEPEEMWTVKRG"
     gene            820..1266
                     /locus_tag="MOX77_004597"
     CDS             820..1266
                     /locus_tag="MOX77_004597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HCA3359966.1"
                     /translation="MDELQKVDDWLTALLANLEPAARNRMMRQLAQQLRRTQQQNIRL
                     QRNPDGIGYEPRRVTARSKKGRIKRQMFAKLRTTKYLKTAASADSASVQFDGKVQRIA
                     RVHHYGLRDRVSRKGPEVRYAERRLLGVNDEVETITRDTLLRWLAG"
     gene            1335..1913
                     /locus_tag="MOX77_004598"
     CDS             1335..1913
                     /locus_tag="MOX77_004598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HCA3359967.1"
                     /translation="MNAQLTEIMRLITNLIRTGTVTEVDRENWLCRVKVGELETNWIN
                     WLTLRAGGARTWWCPSPDEQVVVLSMGGNLETAFVLPAIYSNQFAPPSDSVDGCVTEY
                     PDGGWFEYEPATGRWHVRGIKSMVIEAADNITLKTGEFVVEADTTRINSEVVINGGVT
                     QGGGAMSSNGVVMDKHGHTGVKSGGDTSGGPV"
     gene            1910..2269
                     /locus_tag="MOX77_004599"
     CDS             1910..2269
                     /locus_tag="MOX77_004599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013098787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPW/gp25 family protein"
                     /protein_id="HCA3359968.1"
                     /translation="MTLYIGMSRNDGQVIADTDHLRQSVRDILLTPQGSRLARREYGS
                     LLSALIDQPQNPALRLQIMSAVYVALNRWEPRLTLDSITINGNFDGSMVVELTGQRNN
                     GAPVSLSVTTGADNGSD"
     gene            2256..>2722
                     /locus_tag="MOX77_004600"
     CDS             2256..>2722
                     /locus_tag="MOX77_004600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
                     /protein_id="HCA3359969.1"
                     /translation="MAVIDLSRLPAPQIVDVPDFETLLAERKAAFVALYPVDEQDAVR
                     RTLALESEPVTKLLQESTYREILLRQRINEAAQAVMVAYSMGNDLEQLAANCNVKRLT
                     VVPADNDAVPPVAAVMEDDEALRQRIPAAFEGLSVAGPTGAYEFHARSADGRVA"
BASE COUNT          586 a          745 c          862 g          529 t
ORIGIN      
        1 ctgacgaaga aaaacagcca gctgatcggc ctgtccattc tgaccgaaac caacagccgg
       61 gagcagacgc ggctttatgc ggctgcggag cagaccaccg cactgttgcg aagtcgccag
      121 cgccggatcg aggagctaaa aagtgaaaac gaggatttac gccgctgggc tgacactcct
      181 ttgcctgctg acattatcag gttgcgggac cgcccggccc tcgccggagg tgcagcttac
      241 cgtgagtggc tgtcccagag tgacgcagtg ccgcctggaa aggtcagcgc cgcgcagtaa
      301 cggcgatctg aatgcggtgc tggatgaaac cgaggccgcc tgggcggtct gtgctgacaa
      361 agtggacaca attattgcgt gtcaggagcg agacagtgaa caaaccgcag tccttacgca
      421 gcgccctgaa taaagtggtt gcctatgtcc gggacaaccc ggacaagctg caccttttcg
      481 ttgataacgg atcactggtg gcaacaggag ccagttccat gtcatgggaa taccgctaca
      541 ccctgaacgt ggtgatcgag gatttcagcg gcgaccagaa tctgctgatg gccccagtcc
      601 tgctgtggct cagtaccagc cagccggacg ccatcaacaa cccggatctg cgcgaaaaac
      661 tgttcacctt tgaagtggat attctgcgaa acgatgtgtg cgatatcagc atgaacctgc
      721 aactgactga gcgtgtgctg gtcagcactg acggcagcgt gtcaagcgtt gaagcggtgc
      781 cggagccgga cgaacccgaa gaaatgtgga cggtgaaacg tggatgagct gcagaaggtt
      841 gatgactggc tgacggcgct gctggcgaat ctggagcctg ccgcacgcaa ccgtatgatg
      901 cggcaactgg cgcaacagtt gcgccggacg cagcagcaga acatcaggct gcagcgtaat
      961 cctgacggca tcggctatga gccgcgcagg gtgacagccc gcagcaagaa gggacgtatc
     1021 aaacgccaga tgtttgcaaa gcttcgcacc acaaaatacc tgaaaaccgc cgccagtgcg
     1081 gactccgcca gcgtgcagtt tgatggcaag gtgcagcgca ttgcccgtgt tcaccattac
     1141 ggcctgcgtg atcgcgtcag ccgaaaaggc ccggaggtcc gctacgcaga gcgccgcctt
     1201 ttgggcgtga atgatgaggt ggaaaccatc acccgtgaca ctctgctgcg ctggctggcg
     1261 gggtgatctt tgtgccactg ctggcacaag cgcccgcgct gcctcccttt tccctctgat
     1321 ggcaaccttt cgttatgaat gcacaactga ccgaaatcat gcgccttatc accaacctga
     1381 tccgcaccgg caccgtgacc gaagtggacc gggaaaactg gctgtgccgg gtgaaagtgg
     1441 gcgagcttga aactaactgg attaactggc tgacgctgcg tgccggtggt gcccgtacat
     1501 ggtggtgccc gtcgccggat gagcaggtgg tggtgctgag catgggcggc aatctggaaa
     1561 ccgcttttgt gctgcccgcc atctactcca atcagtttgc gccgccgtcg gattctgtgg
     1621 acggctgcgt gacggagtac ccggacgggg gctggtttga gtacgaaccc gccaccggga
     1681 ggtggcatgt ccggggtatc aaatccatgg tgatcgaggc ggcggacaat atcaccctaa
     1741 aaaccggtga gtttgtggtg gaggctgaca caacacgcat taatagcgag gtggtgatca
     1801 acggcggcgt cacccagggc ggcggcgcaa tgagttctaa cggggtcgtg atggataaac
     1861 acggtcacac tggcgttaag tcaggcgggg atacatcggg aggtccggta tgacgttgta
     1921 tatcggtatg agcaggaatg acgggcaggt cattgcagat accgaccatc tgcgccagtc
     1981 ggtgcgggat attctgctga cgccgcaggg cagtcgtctt gctcgccggg aatatggctc
     2041 cctactgtca gccctgattg accagccgca gaacccggca ctgcgcctgc agattatgtc
     2101 tgcagtctat gtggcgctga accgctggga gccgcgcctt acgctggact ccatcaccat
     2161 caacggcaat tttgacggct ctatggtggt tgagcttacc gggcagcgca acaacggcgc
     2221 gccggtttca ctttcggtaa ctacaggagc agacaatggc agtgattgac ctttcccggc
     2281 tgcccgcgcc gcagatagtg gacgtgccgg attttgagac gctgctggct gagcgcaagg
     2341 ccgcttttgt ggctctttat cctgtggatg aacaggacgc ggtgcggcgc acgctggcgc
     2401 tggaatctga acccgtcacc aagctgctgc aggaaagcac ataccgcgaa atcctgctgc
     2461 gccagcgtat taacgaggct gcgcaggcgg tgatggtggc ctattcgatg ggaaatgatc
     2521 ttgagcagct ggcagccaac tgcaacgtga aacgcctgac tgtagtgcct gctgataatg
     2581 atgcagtacc gccggtcgcc gcagtgatgg aagatgatga ggcgctacgc cagcgcatcc
     2641 ctgctgcgtt tgaggggttg tcggttgctg gcccgacggg agcctatgaa tttcacgcca
     2701 gaagtgcgga cggacgtgtg gc
//
LOCUS       DAGWFR010000308         2721 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.311, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000308 DAGWFR010000000
VERSION     DAGWFR010000308.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2721)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2721)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2721
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.311"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..718
                     /locus_tag="MOX77_004601"
     CDS             <1..718
                     /locus_tag="MOX77_004601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HCA3359970.1"
                     /translation="AWTPLSVWYNDAGQALQFEIFDDANFLVLVEPRIILQAPDDYLL
                     AGIGDTLAKWYEAVVLAPQPETLPLTVRLGINSACAIRDLLLTSSEQALADKQQRRLT
                     QAFCDVVDAIIAGGGMVGGLGERYTRVAAAHAVHNGLTVLPQTEKFLHGTKVAYGILV
                     QSALLGQDDVLAQLITAYRRFHLPTRLSELDVDIHNTAEIDRVIAHTLRPVESIHYLP
                     VTLTPDTLRAAFEKVEFFRI"
     gene            complement(754..951)
                     /locus_tag="MOX77_004602"
     CDS             complement(754..951)
                     /locus_tag="MOX77_004602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbdD/YjiX family protein"
                     /protein_id="HCA3359971.1"
                     /translation="MFDTLSKAGKYLGQAAKMMIGVPDYDNYVEHMRITHPDQTPMTY
                     EEFFRERQDARYGGKGGARCC"
     gene            complement(1015..>2721)
                     /gene="cstA"
                     /locus_tag="MOX77_004603"
     CDS             complement(1015..>2721)
                     /gene="cstA"
                     /locus_tag="MOX77_004603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation protein CstA"
                     /protein_id="HCA3359972.1"
                     /translation="MVLFVSTRRDGRSLGELVKEEMGATAGVIVLVACFMIMVIILAV
                     LAMIVVKALTHSPWGTYTVAFTIPLAIFMGIYLRYLRPGRIGEVSVIGLVFLIFAIIS
                     GGWVAASPTWAPYFDFTGVQLTWMLVGYGFVAAVLPVWLLLAPRDYLSTFLKIGTIVG
                     LAVGILIMRPTLTMPALTKFVDGTGPVWTGDLFPFLFITIACGAVSGFHALISSGTTP
                     KMLANEGQACFIGYGGMLMESFVAIMALVSACIIDPGVYFAMNSPMAVLAPAGTADVV
                     ASAAQVVSSWGFAITPDTLHQIANEVGEQSIISRAGGAPTLAVGMAYILHGALGGMMD
                     VAFWYHFAILFEALFILTAVDAGTRAARFMLQDLLGVVSPGLKRTDSLPANLLATALC
                     VLAWGYFLHQGVVDPLGGINTLWPLFGIANQMLAGMALMLCAVVLFKMKRQRYAWVAL
                     VPTAWLLICTLTAGWQKAFSPDAKIGFLAIANKFQAMIDSGNIPPQYTESQLAQLVFN
                     NRLDAGLTIFFMVVVVVLAVFSIKTALAALKIDKPTANETPYEPMPENVDEIVTQAKG
                     AH"
BASE COUNT          663 a          825 c          703 g          530 t
ORIGIN      
        1 cgcctggaca ccgctttccg tctggtataa cgacgcggga caggcgttac agttcgaaat
       61 ttttgatgat gccaattttc tggtgctggt cgaaccgcgc attattctgc aggcgcccga
      121 tgactatctg ttagctggca ttggcgatac gctggcgaaa tggtatgaag ccgttgtgct
      181 tgcgccgcag cctgaaacgt tgccattgac cgtaaggctg ggcattaaca gcgcgtgcgc
      241 tattcgcgat ctcctactga ccagcagcga acaagcatta gcggataaac agcagcgtcg
      301 gctgacccag gcattttgcg acgtggtgga tgcgattatt gctggcggcg gtatggtcgg
      361 cggcctcggg gaacgctata cccgtgtcgc cgccgcccat gcggtacaca acggtctgac
      421 cgtcctgccg caaacggaaa aattcctgca cggaacgaaa gtggcttatg gcattctggt
      481 gcaaagcgcg ctactgggac aagatgacgt gctggcgcaa ttgattacag cgtaccggcg
      541 atttcatctg ccgacccggc ttagcgaact ggacgtggat attcataaca ccgcagagat
      601 cgatagggtc atcgcgcata ccctgcgccc ggtcgaatct atccactatt taccggtgac
      661 gttaacgcca gacaccctgc gtgcggcgtt tgaaaaagtt gaatttttca gaatatagcc
      721 tggtggcgtt gcgcttgtca gacctggcaa ccatcagcag caacgcgcgc cgccttttcc
      781 accatagcgc gcatcctgcc gctcgcggaa aaattcttca taggtcatcg gcgtctgatc
      841 cggatgcgtt atgcgcatat gttccacata gttgtcgtag tctggcacgc caatcatcat
      901 ttttgctgcc tgtcccagat attttccggc tttcgaaagc gtatcgaaca tcgttgtcac
      961 ctgtcatcca aacgccctct ccttattctg gagagggcta ttgatgaaaa aagattagtg
     1021 cgcgcctttc gcttgcgtca cgatctcatc cacattttcc ggcatcggct catacggcgt
     1081 ttcattcgcc gtcggtttat caatcttcag agcggccagc gccgtcttaa tagagaagac
     1141 cgccagcacc acgaccacca ccataaagaa gatggttagc ccggcatcca gacggttatt
     1201 gaataccaac tgcgcgagct gcgattcggt gtactgcggc ggaatattgc cgctgtcgat
     1261 catcgcctgg aatttattgg caatggccag gaagccgatt ttcgcatccg gactaaacgc
     1321 tttctgccag cccgccgtca gcgtacaaat cagcagccag gccgtcggca ccagcgcgac
     1381 ccacgcataa cgctgacgct tcattttgaa aagtaccacg gcgcaaagca tcagcgccat
     1441 ccccgccagc atctggttgg cgatgccaaa cagcggccac agggtgttaa taccgcccaa
     1501 cggatcgacc acgccctgat ggaggaaata cccccacgcc agcacgcaca atgccgtagc
     1561 aagcaggttc gctggcagcg aatcggtacg tttcagccct ggcgacacta cgcccaacaa
     1621 atcctgcaac ataaagcgcg ccgcacgggt acccgcatcc accgccgtca gaataaacag
     1681 cgcttcaaac agaatggcga agtgatacca gaacgccaca tccatcatgc cgcccaacgc
     1741 gccatgtaaa atgtaggcca tccctaccgc cagcgttggc gcaccacctg cgcgggagat
     1801 aatggattgt tcgccgactt cattggcaat ctggtgtaac gtatccggcg tgatagcgaa
     1861 cccccaacta ctgaccacct gcgcggcaga agctacgaca tccgctgtcc ccgctggcgc
     1921 cagtaccgcc atcgggctat tcatcgcaaa gtaaacgccc ggatcgataa tacaggcgga
     1981 gaccagcgcc ataatggcga cgaaagattc cattaacatc ccgccgtagc cgataaagca
     2041 ggcctggcct tcgttggcca acatcttcgg cgtcgtgccg gaggagatga gcgcatggaa
     2101 accggatacc gcgccgcagg cgatggtaat aaacaggaac gggaacaggt cgcccgtcca
     2161 gacgggtccg gtaccatcaa caaatttggt cagcgccggc atggtcagcg tcggacgcat
     2221 aatcagaatc ccgactgcca gaccgacaat cgtaccaatt ttcaggaagg tagagaggta
     2281 atcacgcggc gcgagcagca gccagaccgg cagtaccgcc gcgacaaaac cataacccac
     2341 cagcatccag gtaagctgca cgccagtaaa atcaaagtac ggcgcccagg ttgggcttgc
     2401 cgccacccat cccccggaaa taatagcgaa aataagaaat accagcccaa tgaccgacac
     2461 ctcgccgatg cgccccggac gcagataacg cagatagatg cccataaaaa tcgccagtgg
     2521 aatagtgaac gcgacagtgt acgttcccca cgggctatgg gtcagcgctt tcaccacgat
     2581 catcgccagg acggccagaa tgatcaccat gatcataaag caggctacca gcacgatcac
     2641 ccctgccgtc gcgcccatct cctctttaac cagctcgcca agcgaacgcc catcgcgccg
     2701 ggtcgagacg aacagcacca t
//
LOCUS       DAGWFR010000309         2717 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.312, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000309 DAGWFR010000000
VERSION     DAGWFR010000309.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2717)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2717)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2717
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.312"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..424
                     /gene="tolA"
                     /locus_tag="MOX77_004604"
     CDS             <1..424
                     /gene="tolA"
                     /locus_tag="MOX77_004604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cell envelope integrity protein TolA"
                     /protein_id="HCA3359973.1"
                     /translation="AAAEKAAAAEGVDDLLGDLSSGKNAPKTGGGAKGNGQPSKDSGT
                     SGANGGTTGADISAYAKQIQVAIQSRLYDASLYQGKQCVLHISLAPDGSLKSITSEGG
                     DPALCQAALMATKTAKIPKPPSQAVYEKIKDAKLDFKL"
     gene            548..1840
                     /gene="tolB"
                     /locus_tag="MOX77_004605"
     CDS             548..1840
                     /gene="tolB"
                     /locus_tag="MOX77_004605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001646851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system protein TolB"
                     /protein_id="HCA3359974.1"
                     /translation="MKQALRVAFGFLMLWAAVLHAEVRIEITQGVDSARPIGVVPFKW
                     AGPGAAPEDIGGIVAADLRNSGKFNPLDRSRLPQQPATAQEVQPTAWSALGIDAVIVG
                     LVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIK
                     GAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVT
                     FESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGTKLAFALSKTGSLNLYVMDLA
                     SGQIRQITDGRSNNTEPTWFPDSQTLAFTSDQAGRPQVYKMNINGGAAQRITWEGSQN
                     QDADVSSDGKFMVMVSSNNGQQHIAKQDLVTGGVQVLSSTFLDETPSLAPNGTMVIYS
                     SSQGMGSVLNLVSTDGRFKARLPATDGQVKSPAWSPYL"
     gene            1875..2399
                     /gene="pal"
                     /locus_tag="MOX77_004606"
     CDS             1875..2399
                     /gene="pal"
                     /locus_tag="MOX77_004606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-associated lipoprotein Pal"
                     /protein_id="HCA3359975.1"
                     /translation="MQLNKVLKGLMIALPVMAIAACSSNKNASNDGSEGGMLNGAGTG
                     MDANGNGNMSSEEQARLQMQQLQQNNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSY
                     KVTVEGHADERGTPEYNISLGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHD
                     EAAYAKNRRAVLVY"
     gene            2409..>2717
                     /locus_tag="MOX77_004607"
     CDS             2409..>2717
                     /locus_tag="MOX77_004607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459735.1"
                     /note="periplasmic protein that interacts with TolA; the
                     tol-pal system is probably involved in maintaining cell
                     envelope integrity; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein CpoB"
                     /protein_id="HCA3359976.1"
                     /translation="MSSNFRHHLLSLSLLVGIAAPWAAFAQAPISSVGSGSVEDRVTQ
                     LERISNAHSQLLTQLQQQLSDNQSDIDSLRGQIQENQYQLNQVMERQKQIMLQLGSLN
                     N"
BASE COUNT          647 a          680 c          776 g          614 t
ORIGIN      
        1 agcggctgcc gaaaaagcgg ccgccgcaga aggcgtcgac gatctgcttg gcgatctcag
       61 ctcgggtaag aatgcgccga aaaccggcgg cggcgcgaaa gggaatggtc agccatcgaa
      121 agatagcggt acatcgggcg ctaacggtgg gacgacaggc gctgatatca gcgcctacgc
      181 gaaacagatt caggtcgcca ttcagagccg tctgtatgat gcgagcctgt atcagggcaa
      241 acaatgtgtc ttgcatatta gcctggcgcc ggatggctca ttaaaaagca ttacgtctga
      301 gggcggcgat ccggcgcttt gtcaggcggc gttaatggcg acaaaaaccg cgaaaattcc
      361 taaaccgcca agccaggctg tttatgagaa aataaaggat gccaaactag actttaaact
      421 gtagatactt ttctttatgg aagttggagc ggttgagttg ttactggtcc tggtggtttt
      481 gtgtatttga gtttgttaac attctgctaa attatcgtgg gtcgcaggcc caggtatggg
      541 agatatgatg aagcaggcat tacgagtagc atttggtttt ctgatgctgt gggcggcagt
      601 gctgcacgca gaagtccgta tcgagatcac ccagggggtg gactcggcgc gaccgattgg
      661 cgttgtgcct tttaaatggg ccgggccggg cgctgcgcct gaagatatcg gcggcatcgt
      721 ggcggcagat ttacgcaata gcggtaaatt taatccgtta gaccggtccc gactgccgca
      781 gcagccagcc accgctcagg aagttcagcc taccgcatgg tctgcgctgg gtattgatgc
      841 cgtcatcgtt ggactggtca cgccgaatcc ggacggttcg tacaatgttg cttatcagct
      901 ggttgacact ggcggtgcgc cggggactgt actggcgcaa aactcctata aagtgaacaa
      961 gcagtggctg cgttatgcag gccacaccgc cagtgacgaa gtctttgaaa aactgacggg
     1021 cattaagggc gcgttccgta ctcgtatcgc ctatgtggta cagactaacg gcggtcagtt
     1081 cccgtatgaa ctgcgtgtgt cggattacga tggctacaat cagttcgtag tgcaccgttc
     1141 tccgcagccg ttgatgtctc cggcgtggtc tccggacggc tcaaaactgg cttacgtgac
     1201 ttttgaaagc ggtcgctccg cgctggttat ccagacgctg gcaaacggcg cagtgcgtca
     1261 ggttgcgtcc ttcccgcgtc acaacggcgc gccggccttc tcgccggatg ggacgaaact
     1321 ggcgttcgcg ttatcgaaaa ccggaagtct gaacctgtac gttatggatc tcgcctccgg
     1381 tcagattcgt cagataacgg acgggcgtag caacaatacg gagccgacct ggttcccgga
     1441 cagccagact ctggccttta cttctgacca ggctggacgt ccgcaagtgt ataaaatgaa
     1501 cattaacggc ggtgcggcgc agcgtattac ctgggaaggt tcgcaaaacc aggatgcgga
     1561 tgtcagcagc gacggtaaat ttatggtaat ggtaagctca aataacgggc agcagcacat
     1621 tgccaaacaa gatctggtga cgggtggcgt acaggttctg tcgtcaacgt tcctggatga
     1681 aacgccaagt ctggcaccta acggcacgat ggtaatctac agctcttctc aggggatggg
     1741 atctgtgctg aatttggttt ctacagatgg gcgtttcaaa gcgcgtcttc cggcaactga
     1801 tggtcaggtg aaatcgcctg cctggtcgcc gtatctgtga taataattaa ttgattacta
     1861 aaggaattaa agaaatgcaa ctgaacaaag tgctgaaggg cctgatgatt gccctgcctg
     1921 ttatggcaat cgcggcatgt tcttccaaca agaacgccag caatgacggt agcgaaggcg
     1981 gcatgctgaa cggcgccggc actggtatgg acgctaacgg caacggcaac atgtcatctg
     2041 aagagcaagc gcgtctgcag atgcagcagc tgcagcagaa caacatcgtt tacttcgatc
     2101 tcgacaagta cgatatccgt tctgacttcg cggcaatgct ggatgcgcac gctaacttcc
     2161 tgcgtagcaa cccgtcttac aaagtcaccg tagaaggtca cgcggacgaa cgcggtactc
     2221 cggagtacaa catctccctg ggcgaacgtc gtgctaacgc cgttaaaatg tacctgcagg
     2281 gtaaaggcgt ttccgctgac cagatctcca tcgtttctta cggtaaagaa aaacctgccg
     2341 tactgggcca cgacgaagcg gcttacgcta agaaccgtcg cgctgtactg gtttactaag
     2401 agaattgcat gagcagtaac ttcagacatc acctgttgag tctgtcgtta ctggttggca
     2461 tagcggcccc ctgggccgct tttgctcagg cgccaatcag tagtgtcggc tcaggctcgg
     2521 tcgaagaccg cgtcactcaa cttgagcgta tctctaacgc tcacagccag cttttaaccc
     2581 aacttcagca gcagctctcc gataatcagt ctgatatcga ttctttgcgc ggccaaatcc
     2641 aggaaaatca gtatcaactg aatcaggtga tggagcgcca gaagcaaatt atgctgcagc
     2701 tggggagttt aaataat
//
LOCUS       DAGWFR010000310         2717 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.313, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000310 DAGWFR010000000
VERSION     DAGWFR010000310.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2717)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2717)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2717
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.313"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..476)
                     /locus_tag="MOX77_004608"
     CDS             complement(<1..476)
                     /locus_tag="MOX77_004608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3359977.1"
                     /translation="MSESVRTNTSIWSKGMLSVIVAQFLSAFGDNALLFATLALLKAQ
                     FYPDWSQPVLQMVFVGAYILFAPFVGQIADSFAKGRVMMVANGLKLAGAAGICLGVNP
                     FVGYTLVGIGAAAYSPAKYGILGELTTGDKLVKANGLMEASTIAAILLGSVAGGVLA"
     gene            complement(469..2628)
                     /gene="aas"
                     /locus_tag="MOX77_004609"
     CDS             complement(469..2628)
                     /gene="aas"
                     /locus_tag="MOX77_004609"
                     /EC_number="2.3.1.40"
                     /EC_number="6.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional acyl-ACP--phospholipid
                     O-acyltransferase/long-chain-fatty-acid--ACP ligase"
                     /protein_id="HCA3359978.1"
                     /translation="MLFGFFRNLFRVLYRVRVTGDVRALQGNRVLIAPNHVSFIDGML
                     LALFLPVRPVFAVYTSISQQWYMRWLTPLIDFVPLDPTKPMSIKHLVRLVEQGRPVVI
                     FPEGRISVTGSLMKIYDGAGFVAAKSGATVIPLRIDGAELTPFSRLKGLVKRRLFPRI
                     QLHILPPTQIPMPEAPRARDRRKIAGEMLHQIMMEARMAVRPRETLYESLLAAQYRYG
                     AGKNCIEDINFTPDTYRKLLTKTLFVGRILEKYSVEGEKIGLMLPNAAISAAVIFGAV
                     SRRRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLE
                     DLKADVTPADKLWIFAHLLAPRLAQVKQQPEDAAIILFTSGSEGHPKGVVHSHKSILA
                     NVEQIKTIADFTANDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPEL
                     VYDRNCTVLFGTSTFLGNYARFANPYDFYRLRYVVAGAEKLQESTKQLWQDKFGLRIL
                     EGYGVTECAPVVSINVPMAAKPGTVGRILPGMDARLLAVPGIENGGRLQLKGPNIMNG
                     YLRVEKPGVLEVPSAENARGETERGWYDTGDIVRFDENGFVQIQGRAKRFAKIAGEMV
                     SLEMVEQLALGVSAEKMHATAIKSDASKGEALVLFTTDSELTREKLQHYAREHGIPEL
                     AVPRDIRYLKQLPLLGSGKPDFVTLKSWVDAPEQHHE"
BASE COUNT          662 a          804 c          683 g          568 t
ORIGIN      
        1 gccaatacgc cgcccgcgac ggaaccgagc aaaatcgccg caatcgtaga ggcttccatc
       61 aggccattgg ctttcaccag cttatcgccc gtcgtcagtt cgcccagaat accgtatttc
      121 gccggagaat aagccgccgc gccaatcccg accaacgtat aaccgacaaa aggatttacg
      181 ccgaggcaga tacctgccgc tcccgccagt ttaagaccat tggcgaccat catcacccgg
      241 cctttggcaa agctgtccgc tatctggccg acaaacggcg caaaaagaat gtaagcgccc
      301 acaaacacca tttgcaaaac aggctggctc cagtccgggt aaaactgagc tttcagcagt
      361 gccagcgtcg cgaacagcag cgcattatcg ccaaaagccg agagaaactg cgcgacaatt
      421 accgacagca tccctttcga ccagatggag gtgttagtac gtactgactc actcatgatg
      481 ttgttccggc gcatccaccc aacttttcag cgtcacaaaa tcgggtttcc cgctgccaag
      541 caagggaagc tgtttcagat aacggatatc acgcgggacg gcaagttccg gaataccgtg
      601 ttcacgggca tagtgctgta acttttctcg ggtgagttcg ctgtcagtcg taaacagtac
      661 cagcgcttca cctttgctgg catcgctttt aatggcggta gcgtgcattt tctccgccga
      721 aacgccaagc gccagttgct cgaccatctc cagcgagacc atttcgccag caattttcgc
      781 aaagcgtttc gcgcgcccct gaatctgcac aaaaccattt tcatcgaagc gtacaatatc
      841 gcccgtgtcg taccacccgc gctcggtttc gcctctggcg ttttccgccg acggcacctc
      901 cagcacgccc ggtttttcca cgcgcagata gccattcatg atattcggcc ctttcagctg
      961 tagccgaccg ccgttttcaa taccgggcac cgccagcaga cgcgcgtcca tgccaggcag
     1021 aatgcggcca acagtgccag gcttagccgc catcggcacg ttaatcgaga ctactggcgc
     1081 gcattccgtt accccgtagc cctcaagaat gcgcagaccg aatttatcct gccacagttg
     1141 tttggtgctc tcctgaagtt tttccgcacc ggccaccaca tagcgcaggc gataaaaatc
     1201 atacggattg gcaaagcgcg catagttgcc gaggaaggtt gatgtaccaa acagcacggt
     1261 acagttacgg tcatagacca gttccggcac aatgcggtag tgcagcggac ttggataaag
     1321 aaacacttcc gcgccggtca acaacggcgt aaacaggccc accgtcaaac cgaacgagtg
     1381 aaagagcggc agcgccgaca taaaacgatc attggcggtg aaatccgcaa tcgtttttat
     1441 ctgctcgacg ttcgccagaa tacttttatg gctgtgcacc acccctttcg ggtgcccttc
     1501 cgagccggag gtaaaaagaa taatcgccgc gtcttccggc tgctgtttta cctgcgccag
     1561 tcgcggcgcc aggaggtggg caaaaatcca cagcttgtcg gcgggtgtga cgtccgcttt
     1621 taaatcttcc aggtaaaccc agcgaacctg cgttagctgc tccggcaggt gccacaattt
     1681 acctttatcg aggaactggc gggaggtaaa aatcgtttta atttccgccg cggtaatcgc
     1741 gctggtcagc ccttttaccc ccgccgtgta gttcatcatg gccggaatgc ggcgacgaga
     1801 aaccgcgccg aaaatcaccg ccgcgctgat ggcggcattc ggcagcatta aaccgatttt
     1861 ctcgccctca acgctgtact tttccagaat ccggccaaca aaaagcgtct tggtcagtaa
     1921 cttacgatac gtatccggcg taaagttaat gtcctcaata cagtttttac ccgcgccgta
     1981 acgatattgc gccgccagca acgattcgta taacgtctcg cgcgggcgca ctgccatacg
     2041 cgcttccatc atgatctggt gcagcatctc acccgctatc ttacgtctgt cgcgcgcgcg
     2101 cggcgcttcc ggcatcggta tttgcgtcgg cggtaaaata tgaagctgaa tgcgggggaa
     2161 taagcgccgt ttaaccagac ctttcaggcg actgaaaggg gtaagctccg cgccgtcaat
     2221 gcggagcgga atgacggttg cgcccgattt tgccgccaca aagcctgcgc cgtcataaat
     2281 tttcatcagc gagccggtca cggaaatccg cccttccggg aaaatcacca ctggacgccc
     2341 ctgctccacc agacgcacca ggtgtttaat ggacatgggt ttagtgggat cgagcggtac
     2401 aaaatcgatc agcggcgtta accagcgcat ataccattgc tggctgatgg aggtatatac
     2461 cgcaaagaca ggccgtaccg gcaaaaacag cgccagtagc ataccatcga taaatgaaac
     2521 gtgattgggg gcaattaaga cccggttccc ctgtagcgcc cggacatcgc cagtgacgcg
     2581 cacacgataa agcacgcgaa acaggttacg gaaaaatcca aacagcattt caactccctt
     2641 tggccgacaa ttcgctaaaa catgaattgt ggcagattac acgagttgcg taacaggagc
     2701 gatagcaaaa taggttc
//
LOCUS       DAGWFR010000311         2709 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.314, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000311 DAGWFR010000000
VERSION     DAGWFR010000311.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2709)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2709)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2709
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.314"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..2149)
                     /gene="uvrA"
                     /locus_tag="MOX77_004610"
     CDS             complement(<1..2149)
                     /gene="uvrA"
                     /locus_tag="MOX77_004610"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HCA3359979.1"
                     /translation="MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDT
                     LYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTIT
                     EIHDYLRLLFARVGEPRCPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKG
                     EHTKTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVIDRFKVRNDLSQRLA
                     ESFETALELSGGTAVVADMDDEKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGA
                     CPTCDGLGVQQYFDPDRVIQNPDLSLAGGAIRGWDRRNFYYFQMLKSLAEHYKFDVDA
                     PWASLSANVHKVVLYGSGKENIEFKYMNDRGDTSVRRHPFEGVLHNMERRYKETESSA
                     VREELAKFISNRPCASCEGTRLNREARHVFVENTPLPAISDMSIGHAMDFFTNLKLSG
                     QRAKIAEKVLKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGV
                     MYVLDEPSIGLHQRDNERLLGTLIHLRNLGNTVIVVEHDEDAIRAADHVIDIGPGAGV
                     HGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKQRVPANPEKVLKLTGARGNNLK
                     DVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHF
                     DKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA"
     gene            2397..>2709
                     /gene="ssb1"
                     /locus_tag="MOX77_004611"
     CDS             2397..>2709
                     /gene="ssb1"
                     /locus_tag="MOX77_004611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein SSB1"
                     /protein_id="HCA3359980.1"
                     /translation="MASRGVNKVILVGNLGQDPEVRYMPSGGAVANLTLATSESWRDR
                     QTGEMKEQTEWHRVVMFGKLAEVAGEYLRKGSQVYIEGQLRTRKWTDQSGQERYTTEI
                     NV"
BASE COUNT          608 a          734 c          753 g          614 t
ORIGIN      
        1 cagcaaaaag ctcacgaacc ggggtaaaga cgcccgtata ggtcgccggg ttggaacgcg
       61 gggtgcgccc gatcgggctc tggtcgatat cgatcacttt atcgaaatgt tccagcccct
      121 gaatatcccg atacggcgcc ggttcggcga tagtcgcccc gtttaactga cgctgggcga
      181 tggggaacag cgtatcgtta atcagcgtcg atttaccgga acccgagacg ccggtgatac
      241 aggtaaacag ccctaccggt agcgtaaggg tcacatcttt caggttgttg ccgcgcgcgc
      301 cggtgagttt gagcactttt tctggatttg ccggcacgcg ttgtttcggc acttcaattt
      361 tgcgtttacc gctcatgtac tggccggtca gcgattccgg taccgccata atggcttcca
      421 gcgggccttc cgccaccacc tcgccgccgt gaacgcccgc gccggggcca atatcaatca
      481 catggtcggc ggcgcggatg gcgtcttcat cgtgttccac cacaatcacg gtattgccaa
      541 gattgcgcag atgaatcagc gtacccagca gccgttcgtt atcgcgctgg tgcagaccga
      601 tggacggttc atccagcaca tacatcacgc cgactaaccc ggcgcctatc tggctcgcca
      661 gacgaatacg ctgggcttcg ccgccggaaa gcgtctctgc cgagcgggag agcgtgagat
      721 agttcaggcc gacgttcacc agaaacttga ggcgatcgcc gatctctttt agcacttttt
      781 cggcgatttt cgcccgttgc ccggaaagct tgagattagt gaaaaaatcc atcgcatggc
      841 caatgctcat atcggaaata gcaggcagcg gcgtattttc cacaaataca tggcgcgctt
      901 cgcgattcag tcgcgttcct tcacagctgg cgcaggggcg attactgatg aatttcgcca
      961 gctcttcgcg caccgcgctg gattccgtct ctttataacg gcgctccata ttatgcagca
     1021 cgccttcgaa cggatggcgg cgcacggagg tatcgccgcg atcgttcata tatttaaatt
     1081 cgatgttctc tttgccggaa ccgtacagca cgactttgtg tacgttggcg ctgaggcttg
     1141 cccacggcgc atccacgtcg aacttatagt gttccgccag cgacttgagc atttgaaagt
     1201 agtaaaaatt gcgacgatcc caaccacgaa tcgcgccgcc tgccagcgac aggtcgggat
     1261 tctggatcac gcggtccgga tcgaaatatt gctgaacgcc gagcccgtca caggtcggac
     1321 aggcgcctgc cgggttgttg aacgagaaca gacgcggttc cagctcgcgc atactgtagc
     1381 cgcaaatcgg gcaggcaaaa ttggcggaga acagaagctc ctccgctttc tcatcgtcca
     1441 tatcggcaac aaccgccgtg ccgccggata attccagcgc cgtttcgaac gactccgcca
     1501 ggcgttggga aagatcgtta cgaactttga agcgatcgat caccacctca atggtatgtt
     1561 tcttttgtag ctccagcttc ggcggatcgg agagatcgca gacttcgccg tcaatacggg
     1621 cgcgaatgta accctggctt gccagatttt ccagcgtttt ggtgtgttcg cctttacgct
     1681 ctttaataat cggcgccagc agcatcaggc gtttgccttc cggctgcgac agcacgttat
     1741 cgaccatctg gctaacggtt tgcgccgcca gcggcacgtc atggtccgga caacgcggct
     1801 cgcccacgcg ggcaaacagc aggcgcaggt agtcgtggat ctcggtaata gtacccaccg
     1861 tagagcgcgg gttgtgcgat gtcgatttct gttcaattga gatcgcgggc gatagcccct
     1921 caatatggtc gacatccggt ttttccatga gcgacaaaaa ctgccgcgcg taagcggaga
     1981 gcgattcaac gtaacgacgc tgcccttcgg catacagagt gtcgaaagcc agtgaggatt
     2041 tgcctgaacc cgaaagcccg gtcacgacaa tcagtttgtc gcgggggatg acgaggttaa
     2101 tatttttgag attatgggtg cgggcgcccc gaacttcgat cttatccatt cacctttccc
     2161 ggtagagact cggatgcctg gtttgtttga aggacaaacg gcagaaacgg ctaattatga
     2221 cacaatttaa cctgtttgaa tatacagtat tggaatgcat cttcagctaa agtatgcaac
     2281 aatatgaggt tcgcgcgagt gacctggaac ctgcatcgca gctattaaaa tgctacgtgg
     2341 aaatggtaca ctcacgcgtt tacactattt atgaaacgta ttcaggagac tcaattatgg
     2401 ccagcagagg cgtaaacaag gtgattctcg ttggtaatct gggccaggac ccggaagtac
     2461 gctatatgcc gagtggcggt gctgtcgcca acttaacgct ggctacttct gaatcctggc
     2521 gcgataggca gaccggcgaa atgaaagagc agactgaatg gcaccgggtg gtgatgttcg
     2581 gcaaactggc ggaagtggcc ggcgaatatc tgcgtaaagg ttctcaggtg tatatcgaag
     2641 gtcaattgcg tacccgcaag tggaccgatc agagtggcca ggaacgctat acgactgaaa
     2701 ttaacgttc
//
LOCUS       DAGWFR010000312         2669 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.315, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000312 DAGWFR010000000
VERSION     DAGWFR010000312.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2669)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2669)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2669
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.315"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..779
                     /locus_tag="MOX77_004612"
     CDS             <1..779
                     /locus_tag="MOX77_004612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000272669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="RHS domain-containing protein"
                     /protein_id="HCA3359981.1"
                     /translation="RSRTDFVWEGFRLLQENVQQQGWRTYVYDAEQPYTPVASVTGRG
                     ESRQVWYYHTDVTGTPQEVTAADGTLVWAGYIRGFGENAADISNSGAYFHQPLRLPGQ
                     YFDDETGLHYNLFRYYAPECGRFVSQDPIGLRGGLNLYAYCPNPLTWIDPLGLDLHHI
                     IPQEVWKTFKTDLKKVTGYVQNVTKKAMDVTNLIDLDKPFHGNHPAYSAYVKDKISEL
                     IKNKKLSLTELRNLQDELRSKINAAKASGKNLNDYFKGGC"
     gene            782..1459
                     /locus_tag="MOX77_004613"
     CDS             782..1459
                     /locus_tag="MOX77_004613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000875616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3359982.1"
                     /translation="MKYKKIRVSYDTEVTGNVNGVYSVEIKDSLSFKSKEDKKYFEGF
                     FLKNSKDYNRVMIDDFKCIDVNKIQEICFFPVRKKIKEIDMIDFCPFKLGLDFLISKK
                     LFDIMNNFNLPPVNKIPTRINTFNTEYFLIGFPMIPQERIDLNKSIFFDTKKRSEFNL
                     KSYDAFINTDFSVKPRKIYPDVFYDVDTIGFQGKGLFFSDRLIDAIQDAGIVGLHVDD
                     TEMEMNP"
     gene            complement(1505..1828)
                     /locus_tag="MOX77_004614"
     CDS             complement(1505..1828)
                     /locus_tag="MOX77_004614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001651551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system SymE family toxin"
                     /protein_id="HCA3359983.1"
                     /translation="MPDFTHCEFYSRVEGRSVRLCGEWMPQAGFINGVPVKIRVMKDC
                     IVITLQNTRELLGCIEGMGVTYINQRNVKAWLKDFPGALNDTGDIPVMSRDLQCITTN
                     CRFAH"
     gene            1828..2669
                     /locus_tag="MOX77_004615"
                     /pseudo
     CDS             1828..2669
                     /locus_tag="MOX77_004615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001529574.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="RHS repeat protein"
BASE COUNT          756 a          542 c          748 g          623 t
ORIGIN      
        1 cgcggagccg gacggacttt gtgtgggagg ggttcaggct gttgcaggag aacgtgcagc
       61 agcagggctg gcggacatat gtgtacgatg cggaacagcc gtacacgccg gtggcgagcg
      121 tgacggggcg gggagaaagc aggcaggtgt ggtattacca cacggacgtg acgggcacgc
      181 cgcaggaggt gacggcggcg gacggaacgc tggtgtgggc ggggtatatc agggggtttg
      241 gagagaatgc ggcggacatc agcaacagcg gggcgtactt tcaccagccg ctgcggctgc
      301 cggggcagta ttttgacgac gagacggggc tgcattacaa tctgttcaga tattatgcac
      361 cggagtgtgg acggttcgtc agtcaggatc cgattgggtt aaggggcggg ttaaacctgt
      421 atgcgtactg ccctaatcca ctgacatgga tagatcctct gggactggat ttacaccata
      481 taattccgca agaggtttgg aaaactttta aaacggattt aaaaaaagtc accggatatg
      541 tgcaaaacgt cacgaagaaa gcaatggatg taacaaactt aattgatctg gataaacctt
      601 tccatggtaa tcatcctgcc tatagtgctt atgtaaaaga taaaattagt gaacttataa
      661 aaaataaaaa attaagttta actgagctaa gaaatttgca ggatgagttg aggtctaaaa
      721 ttaatgctgc aaaagcatct ggtaaaaatc tgaatgacta ttttaaagga ggttgctaat
      781 aatgaaatat aaaaaaataa gagtatctta tgataccgaa gttactggaa atgttaatgg
      841 agtctactcg gtagagataa aagatagtct ttcctttaaa agtaaagaag ataaaaaata
      901 tttcgaaggc ttttttttga aaaatagcaa ggattataat agagtgatga ttgatgactt
      961 taaatgcatt gatgttaata aaattcaaga aatatgtttt ttccctgtaa ggaaaaaaat
     1021 aaaagaaata gatatgattg atttttgtcc attcaaactt ggactcgatt ttctgatatc
     1081 taaaaaatta tttgatatca tgaataactt taacctgcct ccagttaata aaataccaac
     1141 cagaatcaac acattcaata cagaatattt tttgattggt tttccaatga taccacaaga
     1201 aagaattgat ttaaataaat ccatattttt tgatacaaaa aaaagaagcg aatttaattt
     1261 aaaatcatac gacgcattta taaatacaga tttttctgtt aaacccagaa aaatatatcc
     1321 agatgtattt tacgatgttg atactatcgg ttttcagggg aaagggctat ttttttctga
     1381 cagactgatc gatgcaatac aggacgccgg gattgtcggg ctgcatgttg atgacactga
     1441 aatggaaatg aatccataga ctgacacggg atatttgatg accgcgatgt tgttttttct
     1501 gttgttagtg agcaaaccgg caattggtag taatacactg aagatcccga ctcatcaccg
     1561 gaatatcccc ggtgtcattc agcgcaccgg gaaaatcttt cagccatgct ttaacgtttc
     1621 gctggttgat ataggtcacg cccatccctt caatacagcc caacagttca cgggtatttt
     1681 gcagcgtgat cacgatgcag tctttcatca cccgaatttt aacgggcact ccgttaataa
     1741 acccggcctg cggcatccat tcaccgcata aacgaactga acgtccctca acccgtgaat
     1801 agaactcaca gtgggtaaaa tccggcacag tatcagcgcg agtttgcgta cgacgacaac
     1861 gactgcatga cgatgcaccg ggagccgggc ggcgaacggt attactacac ctgggcgtgg
     1921 tttgaaggcc cggacgatgc ggcgtggcgg gtgacgggcc atcatacgga cagcggcgag
     1981 cagtaccgtc tggactggaa tctggcagaa cgttcgctgt gcgtgacgga tagcatgggg
     2041 cgtacgcgct gccactggtg ggatgcgcag ggcctggtga cggcgtaccg ggacgaggcc
     2101 gggcagatga ccactttccg ctggagcgat gaagagcggt tactgctggg gatgacggac
     2161 gcgcagggtg gcaaatggcg ttatgtctat gaccgtctcg gccacctgac ggagacgcat
     2221 gacccgctgg gccgggttga gcagacgcag tggcacccgg tgtggcacca gccggaaacg
     2281 gaggtggatg ccgcgggggt ggcgtggcgt tatgagtatg atgagcgggg caacctgcag
     2341 gcggtcagcg acccgctgca ccagcgcacg gtatacgggt atgaccggca cggccaggtg
     2401 gtgcggataa ccgacgcgcg gggcggagat aaatacctgc agtggaacga agacggacag
     2461 cttatgcgcc acacggactg ttctggctcg cagacggcat ggttttatga tgaacgcacg
     2521 cggctggaaa gggtgacgga cgcggagagt aacagtacgc gttacagcta tgacggcaac
     2581 ggacatctga cggaggtcat gttcgcggac gggcgtacgg agcgttacca gccggatgcg
     2641 gcgggacggc tggtgaaata tacgagccc
//
LOCUS       DAGWFR010000313         2658 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.316, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000313 DAGWFR010000000
VERSION     DAGWFR010000313.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2658)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2658)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2658
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.316"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..2535
                     /gene="bcsA"
                     /locus_tag="MOX77_004616"
     CDS             <1..2535
                     /gene="bcsA"
                     /locus_tag="MOX77_004616"
                     /EC_number="2.4.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-forming cellulose synthase catalytic
                     subunit"
                     /protein_id="HCA3359984.1"
                     /translation="PFSAALGCLWTILAWIVFPLEHPRWQRIRDGHKALYPHINAARP
                     RPLDPARYLIQTLWLVMISSTKERHEPRWRSFARLKDVRGRYHQWMDTLPERVRQKTT
                     HLEKEKELGHLSNGARRFILGVIVTFSLILALICITQPFNPLSQFIFLLLLWGVALLV
                     RRMPGRFSALMLIVLSLTVSCRYIWWRYTSTLNWDDPVSLVCGLILLFAETYAWIVLV
                     LGYFQVVWPLNRQPVPLPKEMSQWPTVDIFVPTYNEDLNVVKNTIYASLGIDWPKDKL
                     NIWILDDGGRESFRQFARHVGVHYIARATHEHAKAGNINNALKHAKGEFVAIFDCDHV
                     PTRSFLQMTMGWFLKEKQLAMMQTPHHFFSPDPFERNLGRFRKTPNEGTLFYGLVQDG
                     NDMWDATFFCGSCAVIRRKPLDEIGGIAVETVTEDAHTSLRLHRRGYTSAYMRIPQSA
                     GLATESLSAHIGQRIRWARGMVQIFRLDNPLFGKGLKLAQRLCYLNAMFHFLSGIPRL
                     IFLTAPLAFLLLHAYIIYAPALMIALFVIPHMVHASLTNSKIQGKYRHSFWSEIYETV
                     LAWYIAPPTLVALINPHKGKFNVTAKGGLVEEKYVDWVISRPYIFLVLLNLLGVAAGV
                     WRYYYGPENETLTVIVSLVWVFYNLVILGGAVAVSVESKQVRRAHRVEIAMPGAIARE
                     DGHLFSCTVHDFSDGGLGIKINGQAQVLEGQKVNLLLKRGQQEYVFPTQVVRVTGNEV
                     GLQLMPLTTKQHIDFVQCTFARADTWALWQDSFPEDKPLESLLDILKLGFRGYRHLAE
                     FAPPSVKVIFRSLTALIAWIVSFIPRRPERQAAIQPSDRVMAQAQQ"
BASE COUNT          543 a          686 c          774 g          655 t
ORIGIN      
        1 ccgtttagcg cagcgctcgg ctgcctgtgg acgattctgg cgtggatagt gtttccgctt
       61 gagcatccgc gctggcagcg tattcgcgac gggcataaag cgctttatcc gcatattaac
      121 gccgcccgcc cgcgcccgct ggacccggcc cgttacctca ttcagaccct ctggctggtg
      181 atgatctcgt cgactaaaga acgtcatgaa ccgcgctggc ggtcatttgc gcgcctgaag
      241 gacgttcgtg gacgttacca tcaatggatg gataccttac cggaacgggt gcgccaaaag
      301 acaacgcacc tggaaaagga aaaagagctg ggacatctta gcaacggcgc ccggcgtttt
      361 attctgggcg ttatcgtgac cttttcactg atactggcgc tgatctgtat tacgcagcca
      421 tttaacccgc tatcgcaatt tatctttctg ctgttgctgt ggggcgttgc gctgttggta
      481 cgacgtatgc cgggacgctt ttccgcgctg atgctcatcg tgctgtcgct aacggtctcc
      541 tgtcgttata tctggtggcg ctatacctcg acgctaaatt gggacgaccc ggtcagtctg
      601 gtgtgcggac tgattctgct gtttgcggaa acctacgcct ggattgtgct ggtgctgggg
      661 tacttccagg tggtgtggcc gttaaatcgt caaccggtgc cgttgccgaa agagatgtcg
      721 cagtggccga cggtggatat ttttgtaccg acctataacg aagaccttaa tgtggtcaaa
      781 aataccattt acgcttcgct tggcattgac tggccgaagg acaagctgaa tatctggatc
      841 cttgatgacg gcgggcgcga atcatttcgt cagtttgccc ggcatgttgg cgtgcattac
      901 attgcccgcg ctacgcatga acacgccaaa gccggcaaca tcaacaatgc gttaaaacac
      961 gcgaaaggcg agtttgtggc gatcttcgat tgcgaccatg taccgacgcg ctcgtttctg
     1021 caaatgacaa tgggctggtt cctgaaagag aaacagctgg cgatgatgca gacgccgcat
     1081 catttcttct ccccggaccc gtttgagcgc aacctgggac gttttcgtaa aacgcctaac
     1141 gaaggcacgc tgttttacgg actggtgcag gacggtaacg atatgtggga tgccactttc
     1201 ttttgcggat cgtgcgcggt gattcgccgt aagccgctgg atgagattgg cggtatcgcc
     1261 gttgagacgg tgacggaaga tgcgcatact tcgctccggc tgcaccggcg aggttatacc
     1321 tcagcgtata tgcgcattcc gcagtcggcg gggctggcga cggaaagcct gtcggcgcat
     1381 atcgggcagc gtattcgttg ggcgcggggc atggtgcaaa ttttccgcct cgataaccct
     1441 ctgtttggta aaggcttaaa actggcgcag cggctgtgct acctcaacgc gatgttccat
     1501 ttcttgtccg gcattccgcg cctgatcttt ctgaccgcgc cgctggcttt tctgctgctg
     1561 cacgcctata tcatttatgc gcctgcgttg atgattgcgc tatttgtgat accgcacatg
     1621 gtccacgcca gcctgactaa ctcgaagatt cagggcaagt atcgtcactc tttctggagt
     1681 gaaatctatg aaacggtact ggcatggtat atcgcaccac cgactctggt cgcgttgatc
     1741 aatccgcaca aagggaaatt taacgtcacg gcgaaaggcg gactggtgga agagaagtac
     1801 gtcgactggg taatctcgcg tccgtatatc ttccttgtct tgcttaacct gctcggcgtg
     1861 gcggcgggcg tatggcgata ctattatggg ccggaaaatg aaacgctgac cgtcatcgtt
     1921 agcctggtgt gggtcttcta taacctggtc attctcggcg gcgcggttgc ggtttcggta
     1981 gagagtaaac aggtcaggcg cgcgcatcgg gtcgagattg ccatgccggg ggccatcgcc
     2041 cgcgaagatg gacatttgtt ctcctgtacc gtacatgact tctccgacgg cgggttaggc
     2101 atcaagatca acggtcaggc gcaggtgctg gaagggcaga aagtgaatct gttgcttaaa
     2161 cgcgggcagc aggaatatgt ctttccaacg caggtagtgc gcgtaacggg caatgaggtc
     2221 gggctgcaac tgatgccgct caccaccaaa caacatattg attttgtgca gtgtaccttc
     2281 gctcgcgccg atacgtgggc gctttggcaa gatagcttcc cggaagataa accgctggaa
     2341 agcttgctgg atattctgaa gctgggcttc cgcggatatc gccacctcgc ggagttcgcg
     2401 ccgccttcag taaaagtaat tttccgatcg ttgacggcgt taattgcctg gattgtatcg
     2461 tttattccgc gtcgcccgga gcggcaagcg gcgatacagc cgtcggatcg ggttatggct
     2521 caggctcaac aatgatgata atgcgatgaa aagaaaattg tcctggatgt gtgcggcggt
     2581 aataggatta agcgcgtttc ctgctttcat gacggcggcg gcgcctgcga tgccgccatt
     2641 gatcaatgct gaacccac
//
LOCUS       DAGWFR010000314         2626 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.317, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000314 DAGWFR010000000
VERSION     DAGWFR010000314.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2626)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2626)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2626
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.317"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..1099)
                     /gene="dnaX"
                     /locus_tag="MOX77_004617"
     CDS             complement(<1..1099)
                     /gene="dnaX"
                     /locus_tag="MOX77_004617"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HCA3359985.1"
                     /translation="MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFS
                     GTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVE
                     DTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPAHVKFLLATTDPQ
                     KLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLSRAADGSLRDAL
                     SLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAVVDANGERVMSLINEAAARGI
                     EWEALLVEMLSLLHRIAMVQLSPAALGSDMAAIEQRMRELARTVPPGDLQLYYQTLLI
                     GRKELPWAPDRRMGVEMTLLRALAFHPRMPLP"
     gene            complement(1213..1764)
                     /gene="apt"
                     /locus_tag="MOX77_004618"
     CDS             complement(1213..1764)
                     /gene="apt"
                     /locus_tag="MOX77_004618"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005125198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HCA3359986.1"
                     /translation="MTATAQQLEFLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALS
                     IELLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPRKLPRETIAETYEL
                     EYGTDQLEIHVDAIKPGDNVLVVDDLLATGGTIEATVKLIRRLGGKVTDAAFIINLFD
                     LGGEQRLEKQGITCYSLMPFPGH"
     gene            complement(1917..2294)
                     /locus_tag="MOX77_004619"
     CDS             complement(1917..2294)
                     /locus_tag="MOX77_004619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF454 family protein"
                     /protein_id="HCA3359987.1"
                     /translation="MQRTILIIIGWLAVVLGTLGVVLPLLPTTPFILLAAWCFARSSP
                     RFHAWLLYRSWFGGYLRHWQRYRAMPPGAKPRAIALILLTFGISLWLVNMMWVRVLLL
                     VILACLLIFMWRIPVIDEKQQKR"
     gene            2363..2626
                     /locus_tag="MOX77_004620"
                     /pseudo
     CDS             2363..2626
                     /locus_tag="MOX77_004620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001519637.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal replication protein"
BASE COUNT          634 a          751 c          693 g          548 t
ORIGIN      
        1 ccggcaaggg catacgcggg tgaaacgcca gcgcacgcaa taacgtcatt tcaacgccca
       61 tccgccggtc cggcgcccag ggcaattctt tgcgaccaat caacaacgtc tgataataga
      121 gctgaagatc gccgggaggc accgtccggg caagttcgcg catccgttgc tcgatagccg
      181 ccatatcgct gcctaacgcg gcaggcgaaa gttgcaccat cgcaatacgg tgcagcaggc
      241 taagcatttc gaccagcagc gcttcccatt caataccgcg cgccgccgcc tcgttgataa
      301 gcgacatgac gcgttcgccg ttagcgtcaa ccactgcctc gactaatgac aaagcctggt
      361 cgtcgtccag cgtaccgagc atggcgctta ccgcctgcgt cgaaacctgc ccgtcgccac
      421 tggcgatcgc ctggtcagtc agacttaatg catcgcgcag gctgccgtca gccgcgcgtg
      481 ataacaactg caacgcgcgg ggttcgtgag cgatatgttc ctcattgaga atatgctcaa
      541 gctgatggcg aatctgttca acatccagcg ctttgagatg aaactgtagg cagcgcgaca
      601 aaatggtcac cggcagcttc tgcggatcgg tggtcgccag taaaaatttc acatgcgctg
      661 gcggctcttc aagcgtttta agtagcgcat taaagctgtg gcgcgacagc atgtggactt
      721 catcgatcag atagacttta aagcgaccgc gcgcaggcgc gtactggacg ttatccagca
      781 ggtcgcgggt gtcttcgact ttggtacgcg atgcggcgtc aatctcaatg agatcgacaa
      841 aacgcccttg ctcaatttcc cgacagttat cgcaaacgcc gcacggcgtc gcggtaatac
      901 cggtttcgca gttcagcccc ttcgccagca gtcgggcgat agaagtttta ccgacgccgc
      961 gcgtgccgga aaaaagatat gcgtgatgaa tgcgccctaa cgacaagccg ttcgccagtg
     1021 cggtcagcac atgttcctgg ccgacgacgt cagcaaaggt ttgtgggcgc cattttctgg
     1081 ctaagacctg ataactcatt ggcaggctct gaaacgctgg aaggtggatt catagaaggg
     1141 taatgctaac acaacctcgc cgatacagcg aggttgtctc tctggctaaa atagcagtgc
     1201 gaatagcctg aatcaatgcc ctggaaacgg catcaggcta taacaggtaa tcccctgctt
     1261 ttccagacgc tgctcgccgc ccagatcgaa caaattgatg atgaacgccg catcggtgac
     1321 tttcccgccc agacgacgga tcagcttcac ggtcgcctca atggtgccgc cagtcgccag
     1381 cagatcgtcc acgaccagca cgttgtcgcc aggtttaatc gcgtcgacat ggatttccag
     1441 ctgatcggtg ccgtactcta attcataggt ctcggcaata gtttcacgcg gtaatttgcg
     1501 cggtttacgt accggaacaa aaccaacgcc cagcccaagc gcaaccggcg cgccaaacag
     1561 gaagccacgc gcttcggtgc cgaccacttt ggtgataccc gcatttttat aacgctcaac
     1621 taacagttca atactgagcg cgtaggcttt cgggtcttcc agtaagctgg tgacatcacg
     1681 gaaaagaatg cccggtttcg ggtaatcctg aatgcttttg atgctgtttt tgagaaactc
     1741 aagctgctgt gcagtcgcgg tcatggatat atgcctgcta agtacggtgt tactcacggc
     1801 gcaatacttt tcagtcaggg gtaacgctcg gttactcttt gaccgcctgc gcctgtgctc
     1861 gaaaacggtc gaatttactg gctgtgaacg acaattgcaa cagcgattcg tgtgcttcag
     1921 cgcttttgtt gcttttcatc aatcaccggt atccgccaca taaaaatcag caggcaggcc
     1981 aaaataacca acagcagcac ccgcacccac atcatattca ccagccacag cgaaatacca
     2041 aaggtcagca atatcaacgc gatcgctcgc ggtttcgctc ccggcggcat ggcccgatag
     2101 cgctgccagt ggcgcagata accgccaaac catgagcggt ataacaacca agcatggaaa
     2161 cgcggcgacg agcgggcgaa acaccaggct gccagtaaaa tgaacggcgt agtcggcaac
     2221 aggggcaaaa ccacgcccag tgtccctaat actaccgcca gccagccaat gatgattaaa
     2281 atagtacgtt gcataatgcg aatcgttatc aaacagaagg ctactgtagc acagcctgtc
     2341 ttattttcat cggggtgttg aattgaaaac cgctatgctg ttacagacgc tggaagagaa
     2401 gctggcgacg ctacgccaac gctgcgcgcc gctggcgtaa catgcgacgt taagcgcgcg
     2461 ctttgaccga caccttttcc gtacccgcag tactctgttg cagggatatc tggaagaggc
     2521 agacgccaat ctcgccgcgt tgcgtcaggc ggtaaaacat gagcaactgc cgcaagtcgc
     2581 ctggctggcg gaacatctgg cttcgcaact ggaggcgata tcgcgt
//
LOCUS       DAGWFR010000315         2616 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.318, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000315 DAGWFR010000000
VERSION     DAGWFR010000315.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2616)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2616)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2616
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.318"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..711)
                     /locus_tag="MOX77_004621"
     CDS             complement(<1..711)
                     /locus_tag="MOX77_004621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein disaggregation chaperone"
                     /protein_id="HCA3359988.1"
                     /translation="METPVSRSALYGKLAGPLFRSLESATAFCKLRSNPWGELTHWLH
                     QLTQQPDNDILHVLRHYQIPLSDVEKALLRQLDMLPAGASAISDFSHHIDLSVEKAWM
                     LASVRYGDNKIRSGWLLLALLTTPELRRVLSSICAPLATLPVDELTEILPSLIETSPE
                     AQERPYDGSGLASAIPGESSQAIPNGVQDGKSALAKYCQDMTAQARDGKIDPVTGREH
                     EIRTMTDILLRRRQNNPLL"
     gene            1079..1981
                     /gene="tagK"
                     /locus_tag="MOX77_004622"
     CDS             1079..1981
                     /gene="tagK"
                     /locus_tag="MOX77_004622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system-associated protein
                     TagK"
                     /protein_id="HCA3359989.1"
                     /translation="MKQDMWELRKIQSQGITDNAQYPAGTYIVFTAAAPYIPLFEQHG
                     KDDIALSLVRHEEAWWIVNHSDELCCAVNEQVMEPHHRMRLNDGDTIEWGLSSWCLAR
                     TNDESRPDVSFPQLVQSSESVAEYLDLDWFKQQQLNPQNPFDIIPVRETAPSYTGHEA
                     DSTLHQLYQEYQQALRPSGQEKPLRPKPFPRNEDAVTQDLTSLYDKKGDTDTLQDMVA
                     GAPGIDAILDTLDTTGEGEMHWLAMESMPDILQLLSPEMGGKTAHSEILPDLTRREHR
                     IIGIDSHYRITPTQKNGNTAHEKN"
     gene            1968..>2616
                     /locus_tag="MOX77_004623"
     CDS             1968..>2616
                     /locus_tag="MOX77_004623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="impE family protein"
                     /protein_id="HCA3359990.1"
                     /translation="MKKTDTLPATLSALLQEYSIAEGIQMAEQQVRENPAKALCRHSL
                     FQLLCVAGDWARALHQLQLCARMEANYTQEARLYRELVCCEMFRHTVFQGEQRPGFLL
                     PQPVWVESLLAALACHDDTGEVDKHRNTALEAITDTGGQWNGGAFDWASDSDSRLGPV
                     LELVTGGVYIWLPFSQIRSLESPQPTRLTDLLWKPVNITLVNGDTHGAWLFTRYSG"
BASE COUNT          676 a          677 c          676 g          587 t
ORIGIN      
        1 cagtagggga ttattctggc gacggcgcag cagaatatcc gtcatggtgc ggatttcatg
       61 ctcacgcccc gtcaccgggt cgattttgcc gtcgcgcgcc tgtgccgtca tgtcctgaca
      121 gtattttgcc agcgcggatt taccgtcctg cacgccgttg ggaatcgcct ggctgctttc
      181 accgggaatg gctgatgcca gaccggagcc gtcgtaaggg cgctcctgcg cttccggcga
      241 tgtttcgatc aacgagggca gtatttccgt cagttcatca accggaagcg tggccagcgg
      301 cgcgcagata ctgctcagta cccgacgcag ttctggcgtg gtcaacaagg ccagcagcaa
      361 ccagccgctg cgaattttgt tatcgccgta acggacgctc gccagcatcc aggccttttc
      421 aacgctgaga tcgatatggt gagaaaaatc actaatggcg ctggccccgg cgggcagcat
      481 atccagttgc cggagtaacg ctttctccac atcagaaaga gggatctggt aatgccgaag
      541 aacgtggaga atatcgttat cgggctgctg tgttaactgg tgcagccagt gagtcagctc
      601 accccaggga ttagagcgta gtttgcaaaa tgccgttgcc gattccagcg accggaatag
      661 tgggccggcc agttttccat ataacgcact gcgtgaaaca ggagtttcca tttgttatgc
      721 cttgtgacat aaaaattcat aaaaataatg catcaatgca catgaatata taaacaattc
      781 tttattaaaa tgttcgacaa aatatcgaaa caaaacaatg atacagatca gggactaatt
      841 agcaaccaag ccgttaatat taaataatca atgaacaaca agataaaaat cgcaattaca
      901 gaattaaaag aaataatatt tcaaaaaaga catctatgca tacaacaatg cattcacgac
      961 gaaaataata aaaagggtgt catcaataat gactccctat gaatttagtt aaaattattt
     1021 atgaattaaa actccctaaa cgtttcctcc agaaaaataa atacatttaa gggacataat
     1081 gaaacaagac atgtgggaat tacggaaaat acagtcgcag ggtataacgg ataacgcaca
     1141 gtatcccgca gggacataca tcgtatttac tgccgccgcc ccctacattc cgctttttga
     1201 gcaacatggg aaagacgata tcgcgctcag tcttgttcgc cacgaagagg cgtggtggat
     1261 tgttaatcac tcggatgaac tgtgctgtgc cgtcaatgag caggtgatgg aacctcatca
     1321 ccgtatgcgg ctgaatgatg gagatacgat tgaatggggt ctgtcatcct ggtgccttgc
     1381 ccgcaccaat gatgagtccc gtcccgatgt ttcgtttcct cagttggttc agtcatctga
     1441 atccgttgct gagtacctgg atctggactg gtttaaacaa caacagctca atccgcagaa
     1501 cccgttcgat attattcccg tccgggaaac cgcgccctct tacaccggcc atgaagcgga
     1561 tagcacgcta caccagcttt accaggaata tcagcaggcc ttgcggccct ccgggcagga
     1621 aaagcccctc cgtcctaaac cgtttccccg aaatgaagac gctgtcaccc aggatttgac
     1681 gtcgttatac gataaaaagg gcgataccga cacgttacag gatatggtgg caggcgcgcc
     1741 cggtattgat gccattctgg atacgctgga cacgaccggt gagggtgaaa tgcactggct
     1801 ggcgatggaa tcaatgcccg atatcctaca actgctctcg ccggaaatgg gggggaaaac
     1861 cgcacatagc gagatactgc ccgatctgac ccgccgcgag catcgtatta ttggcatcga
     1921 tagccactac cgaatcactc cgacacagaa aaatggaaat accgcccatg aaaaaaactg
     1981 acacgcttcc tgctaccctg tccgcgctgc tacaggaata ctctattgcg gaggggattc
     2041 agatggcgga gcagcaggtt cgggaaaatc cggcgaaggc gctctgccgc cacagcctgt
     2101 ttcagttgct gtgtgtggcc ggagactggg cgcgggcgct acaccagctt cagctctgtg
     2161 ccaggatgga ggcaaattat acccaggagg cccggctgta ccgggagctg gtttgctgcg
     2221 aaatgttccg ccacaccgtt tttcagggtg aacaacgacc cggttttctt ctgccgcagc
     2281 ccgtttgggt ggagtcactg ctggcggcac tcgcctgtca tgacgatacc ggtgaggttg
     2341 ataaacaccg taataccgca ctggaagcca taacagacac gggcgggcag tggaacggcg
     2401 gcgcatttga ctgggcgagc gacagcgatt cccgccttgg cccggtactt gagctggtca
     2461 ccggcggcgt gtatatctgg ctaccgtttt cgcaaatacg ctcgctggaa tcgccgcaac
     2521 cgacgcgcct gaccgatctg ctgtggaaac ccgttaatat caccctggtg aatggcgata
     2581 cgcacggtgc ctggctcttt acccgttaca gcggtt
//
LOCUS       DAGWFR010000316         2605 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.319, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000316 DAGWFR010000000
VERSION     DAGWFR010000316.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2605)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2605)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2605
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.319"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..218
                     /gene="pduB"
                     /locus_tag="MOX77_004624"
     CDS             <1..218
                     /gene="pduB"
                     /locus_tag="MOX77_004624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005228567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="propanediol utilization microcompartment protein
                     PduB"
                     /protein_id="HCA3359991.1"
                     /translation="LMADTALKSANVEVVAYSSPAHGTSFSNEAILVISGDSGAVRQA
                     VTSAREIGKTVLATLGSEPKNDRPSYI"
     gene            237..1901
                     /gene="pduC"
                     /locus_tag="MOX77_004625"
     CDS             237..1901
                     /gene="pduC"
                     /locus_tag="MOX77_004625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propanediol dehydratase large subunit PduC"
                     /protein_id="HCA3359992.1"
                     /translation="MRSKRFEALAKRPVNQDGFVKEWIEEGFIAMESPNDPKPSIKIV
                     NGAVTELDGKPVSEFDLIDHFIARYGINLNRAEEVMAMDSVKLANMLCDPNVKRSEIV
                     PLTTAMTPAKIVEVVSHMNVVEMMMAMQKMRARRTPSQQAHVTNVKDNPVQIAADAAE
                     GAWRGFDEQETTVAVARYAPFNAIALLVGSQVGRPGVLTQCSLEEATELKLGMLGHTC
                     YAETISVYGTEPVFTDGDDTPWSKGFLASSYASRGLKMRFTSGSGSEVQMGYAEGKSM
                     LYLEARCIYITKAAGVQGLQNGSVSCIGVPSAVPSGIRAVLAENLICSSLDLECSSSN
                     DQTFTHSDMRRTARLLMQFLPGTDFISSGYSAVPNYDNMFAGSNEDAEDFDDYNVIQR
                     DLKVDGGLRPVREEDVIAIRNKAARALQAVFAGMGLPPITDEEVEAATYAHGSKDMPE
                     RNIVEDIKFAQEIINKNRNGLEVVKALAQGGFTDVAQDMLNIQKAKLTGDYLHTSAII
                     VGDGQVLSAVNDVNDYAGPATGYRLQGERWEEIKNIPGALDPNEID"
     gene            1912..2586
                     /gene="pduD"
                     /locus_tag="MOX77_004626"
     CDS             1912..2586
                     /gene="pduD"
                     /locus_tag="MOX77_004626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propanediol dehydratase medium subunit PduD"
                     /protein_id="HCA3359993.1"
                     /translation="MEINEKLLRQIIEDVLRDMKGSDKPVSFNTPAASTAPQTAAPAG
                     DGFLTEVGEARQGTQQDEVIIAVGPAFGLAQTVNIVGLPHKSILREVIAGIEEEGIRA
                     RVIRCFKSSDVAFVAVEGNRLSGSGISIGIQSKDTTVIHQQGLPPLSNLELFPQAPLL
                     TLETYRQIGKNAARYAKRESPQPVPTLNDQMARPKYQAKSAILHIKETKYVVTGKNPQ
                     ELRVTL"
BASE COUNT          614 a          760 c          724 g          507 t
ORIGIN      
        1 tactgatggc cgataccgcc ctgaagtcag ccaacgttga agtcgtggcg tacagctctc
       61 cggcgcacgg caccagcttt agtaacgaag ccattctggt gatttccggc gactccggcg
      121 cggtccgtca ggcggtgacc tccgcccgcg aaatcggcaa aaccgtcctt gcgaccctcg
      181 gttctgaacc gaaaaacgat cgcccgtcct acatctgata cccacgaggc tgattcatga
      241 gatcgaaaag atttgaagca ctggcgaaac gccctgtgaa tcaggacggc ttcgttaagg
      301 agtggatcga agaaggcttt atcgcgatgg aaagcccgaa cgatccaaaa ccgtcgatta
      361 aaatcgttaa cggcgcggtg accgagctgg acggaaaacc ggttagcgaa ttcgacctga
      421 tcgaccactt tatcgcccgc tacggcatca acctgaaccg cgccgaagaa gtgatggcga
      481 tggattcggt caagctggct aacatgctct gcgatccgaa cgtcaagcgc agcgaaatcg
      541 ttccgctgac caccgccatg accccggcga aaattgttga agtggtttcg catatgaacg
      601 tggttgagat gatgatggcg atgcagaaaa tgcgcgcacg ccgcacgccg tctcagcagg
      661 cgcacgtcac caacgtcaag gataacccgg tgcaaattgc cgccgatgcc gccgaaggcg
      721 catggcgcgg gtttgacgaa caagaaacca cggttgcggt agcacgctac gcgccgttca
      781 acgccatcgc gctgttggtc ggctctcagg ttggtcgtcc gggcgtactg actcagtgct
      841 ccctggaaga agccaccgag ctgaagctcg gcatgctggg ccacacctgc tacgccgaaa
      901 ccatttccgt ttacggcacc gagccggtct tcaccgacgg tgacgatacg ccatggtcga
      961 aaggcttctt agcctcttcc tacgcctctc gcggcctgaa aatgcgcttc acctccggct
     1021 ccggatccga agtgcagatg ggctacgccg aaggcaaatc catgctgtat ctggaggcgc
     1081 gctgcatcta tatcaccaaa gcggctggcg ttcagggtct gcaaaatggc tccgtaagct
     1141 gtatcggcgt accgtctgcc gtgccgtcag gcattcgtgc cgtgctggcg gaaaacctga
     1201 tctgctcttc gctggatctg gaatgctcct ccagtaacga ccagaccttc acccactccg
     1261 atatgcgtcg taccgcgcgc ctgctgatgc agttcctgcc gggtaccgac tttatctcct
     1321 ctggttattc cgcggtgccg aactacgaca acatgttcgc cggttccaac gaagatgcgg
     1381 aagactttga cgactacaac gttatccagc gcgacctgaa agtggacggc ggtctgcgcc
     1441 cggttcgtga agaggacgtt atcgccatcc gtaacaaagc cgcccgcgcg ctgcaggccg
     1501 tgtttgccgg aatggggctg ccgccgatta ccgatgaaga agttgaagcc gcgacctatg
     1561 cccacggttc gaaagatatg ccggagcgta acatcgtcga agacatcaag ttcgcccagg
     1621 aaatcatcaa taaaaaccgc aacggtctgg aagtcgttaa agcgctggcg cagggcgggt
     1681 ttaccgacgt ggcccaggac atgctcaaca tccagaaagc caagctaacc ggcgactatt
     1741 tgcacacctc cgccattatc gtcggcgacg gacaagtgct ctctgcggtt aatgacgtca
     1801 atgactatgc cggtccggca acaggttatc gcctgcaggg agaacgctgg gaagagatta
     1861 aaaacatccc tggcgctctt gatcccaacg agattgatta aggggtgaga aatggaaatt
     1921 aatgaaaaat tgctgcgcca gataattgaa gacgtgctcc gcgatatgaa gggcagcgat
     1981 aaacccgtct cgtttaatac gcctgcggca tccacagcac cacagaccgc tgcgcctgcg
     2041 ggcgacggct ttctgaccga agtgggcgaa gcacgccagg gcactcagca ggacgaagtc
     2101 attatcgccg tcggcccggc atttggcctg gcacagactg ttaatatcgt cggcttaccg
     2161 cataagagca tcctgcgcga agtcattgcc ggtattgaag aagaaggtat cagggcgcgc
     2221 gtgattcgct gctttaaatc ttccgacgtg gcgttcgtcg ccgttgaagg taaccgcctg
     2281 agcggctccg gcatctccat cggcatccag tcgaaagata ctacggttat ccaccagcag
     2341 gggctaccgc cgctctccaa cctggagctg ttcccgcagg cgccgctgct gacgctggaa
     2401 acctaccgtc agattggtaa aaacgccgcc cgctatgcga aacgcgaatc accgcagccg
     2461 gtccctacgc taaatgacca gatggcacgc ccgaagtacc aggcaaagtc ggccattttg
     2521 cacattaaag agaccaagta cgtcgtgacg ggcaaaaacc cgcaggaact gcgcgtgacg
     2581 ctttgataaa ggataactcc atgaa
//
LOCUS       DAGWFR010000317         2546 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.320, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000317 DAGWFR010000000
VERSION     DAGWFR010000317.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2546)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2546)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2546
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.320"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..494
                     /gene="napG"
                     /locus_tag="MOX77_004627"
     CDS             <1..494
                     /gene="napG"
                     /locus_tag="MOX77_004627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ferredoxin-type protein NapG"
                     /protein_id="HCA3359994.1"
                     /translation="QACPYDTLKLATLASGLSAGTPYFVARDIPCEMCEDIPCAKVCP
                     SGALNKDIASIDDSRMGLAVLLDQENCLNFQGLRCDVCYRECPKIDEAITLELDRNMR
                     TGKHARFLPTVHSDACTGCGKCEKVCVLEQPAIKVLPLSLAKGELGHHYRFGWLEGKD
                     GKS"
     gene            481..1350
                     /gene="napH"
                     /locus_tag="MOX77_004628"
     CDS             481..1350
                     /gene="napH"
                     /locus_tag="MOX77_004628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinol dehydrogenase ferredoxin subunit NapH"
                     /protein_id="HCA3359995.1"
                     /translation="MANRKRDAGREARAKKGWWRSHRWLVLRRISQFMVLGMFLSGPW
                     LGFWVLHGNYSSSLLFDTLPLTDPLITLESLASGHLPATVALTGAVIIAVLYALAGKR
                     LFCSWVCPLNPVTDLANWMRRKFDLNQSATIPRHIRYVLLVVVLIGSALTGTLLWEWI
                     NPVSLLGRSLIMGFSSGALLIIALFLFDLLVVEHGWCGHICPMGALYGVLGSKGVVTV
                     TAKKREKCNRCMDCFHVCPEPHVLRAPVLDEQSPAQVTHRDCMTCGRCVDVCSEDVFT
                     ITIHNIIRDASRR"
     gene            1466..1915
                     /gene="napB"
                     /locus_tag="MOX77_004629"
     CDS             1466..1915
                     /gene="napB"
                     /locus_tag="MOX77_004629"
                     /EC_number="1.9.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase cytochrome c-type subunit"
                     /protein_id="HCA3359996.1"
                     /translation="MKSHDLMKALCQWMATLALVVSGAVWAANGVDLSQSPEVSGTQE
                     GAIRMPKEQERMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISP
                     THFMDSDGKVSGNVAPRRYFCLQCHVPQSDTAPIIDNTFTPSQGYGK"
     gene            1925..2527
                     /gene="napC"
                     /locus_tag="MOX77_004630"
     CDS             1925..2527
                     /gene="napC"
                     /locus_tag="MOX77_004630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type protein NapC"
                     /protein_id="HCA3359997.1"
                     /translation="MENSNRKLGWIKRVWRWWRSPSRLALGTLLLIGFIGGVIFWGGF
                     NTGMEKANTEEFCISCHEMRNTVYEEYMETVHYNNRSGVRATCPDCHVPHEWGPKMIR
                     KIKASKELYAKVFGLIDTPQKFEAHRLTMAQNEWRRMKDNNSQECRNCHNFDFMDLTA
                     QKGVAAKMHDQAVKDGQTCIDCHKGIAHKLPDMRDVKPGF"
BASE COUNT          588 a          620 c          772 g          566 t
ORIGIN      
        1 ttcaggcgtg tccatacgac acgctaaaac tggcgacgct ggcctccggg ctatcggcag
       61 gtacgcccta tttcgtcgct cgcgacatcc cctgcgaaat gtgtgaagac attccgtgcg
      121 ccaaagtctg ccccagcggg gcgctgaata aagatatcgc ctccattgat gactcgcgca
      181 tggggctggc ggtgctgctg gatcaggaaa actgcctcaa ctttcagggg ctgcgctgcg
      241 acgtttgcta ccgcgaatgc ccgaaaatcg atgaggccat cacgctggag ctggatcgca
      301 acatgcgcac tggcaaacat gcgcgctttc tgcccaccgt acacagcgac gcctgtaccg
      361 gctgcggcaa atgcgaaaaa gtctgcgtac tggagcaacc agcgataaaa gtgttgccgt
      421 tgtcattggc gaaaggggag ttaggacacc attaccgctt cggctggctg gaggggaaag
      481 atggcaaatc gtaaacgcga cgccgggcga gaagcgcggg cgaaaaaagg ctggtggcgt
      541 agccaccgtt ggctggtgtt acgccgtatc agccagttta tggtgctggg gatgtttctc
      601 agcggcccgt ggctgggctt ttgggttttg catggcaact acagcagtag tttgctgttc
      661 gataccctcc cgttgaccga tccgctgatt accctggaaa gtctcgccag tggacatctt
      721 cccgctaccg tggcgctgac gggagcagtg attatcgctg tgctgtatgc gctggcggga
      781 aagcgattat tttgcagttg ggtttgcccg ctaaaccccg ttaccgattt ggctaactgg
      841 atgcgcagga aatttgacct gaaccagtcg gcgacgattc cacgccatat acggtatgtc
      901 cttctggtgg tggtgttaat cggttcggcg ttgaccggca cgctgctgtg ggaatggatt
      961 aatcccgtgt cgctgttagg tcgtagtctg attatgggat ttagtagcgg cgcgttgctg
     1021 attattgctt tgtttttatt tgatttatta gtcgttgagc acggttggtg cggtcatatt
     1081 tgcccgatgg gcgcgctgta tggcgtgctg ggcagtaaag gcgtagtgac cgtgacggcc
     1141 aaaaaacgtg agaaatgtaa tcgctgtatg gattgttttc atgtttgccc ggaaccgcat
     1201 gtgctacgtg cgccggtgct ggatgagcaa agcccggcgc aggtcactca ccgcgactgc
     1261 atgacctgcg gtcgctgcgt ggatgtctgt tctgaggatg tttttacaat aacgatacac
     1321 aacatcattc gggatgcatc gcggcggtaa gcgaggaaat ccccgggagc atagataacg
     1381 atgtgactgg gattttcgag cgcagccaac aaagaggcag ctcgaaggat gaagtgtaaa
     1441 tgcgatggag ttcgggagcg aaacaatgaa aagccatgac ctgatgaaag cgctgtgtca
     1501 atggatggcc acgcttgccc tggtggtaag tggtgcggtt tgggcggcaa acggagtgga
     1561 tctgagccag tcgccggaag tatccgggac gcaggaaggg gcgattcgta tgccgaaaga
     1621 gcaggaacgt atgccgctaa attacgtcaa ccagccgccg atgatcccgc acagcgtcga
     1681 gggctaccag gtgacgacca ataccaaccg ctgtctgcaa tgccacggcg tggaaagtta
     1741 tcgtacgacg ggcgcgccgc gtatcagtcc gacgcacttt atggacagcg acggtaaagt
     1801 gtcgggcaac gtcgcgccgc gtcgttattt ctgcctgcag tgccacgtac cgcagtctga
     1861 taccgcgccg attatcgaca atacctttac cccctcgcaa ggttacggga aataagaggt
     1921 cattatggaa aattctaacc gtaaacttgg ctggataaag cgcgtctggc gatggtggcg
     1981 cagccccagc cgcctggcgc tggggacgct gctgttaatc ggttttatcg gcggcgtcat
     2041 cttctggggc ggcttcaata ccggaatgga aaaggctaat accgaagagt tttgtattag
     2101 ctgccatgaa atgcgcaaca cggtgtatga ggagtatatg gaaaccgtcc actacaacaa
     2161 ccgtagtggc gttcgcgcca cctgtcctga ctgccatgtg ccgcatgagt gggggccgaa
     2221 gatgatccgt aagatcaaag ccagtaaaga actgtacgcg aaggtatttg ggctgataga
     2281 tacaccgcag aaatttgaag ctcatcgcct gacaatggca caaaatgagt ggcggcgcat
     2341 gaaagacaac aactcgcagg aatgccgtaa ctgccacaat ttcgacttta tggatctgac
     2401 cgcgcaaaaa ggcgtcgcgg cgaaaatgca cgatcaggcg gtaaaagatg gacagacctg
     2461 tatcgattgc cacaaaggga tcgcgcataa actgccggat atgcgtgatg ttaaaccagg
     2521 tttctgacag gacgttgatg agtggg
//
LOCUS       DAGWFR010000318         2497 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.321, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000318 DAGWFR010000000
VERSION     DAGWFR010000318.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2497)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2497)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2497
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.321"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..578
                     /locus_tag="MOX77_004631"
     CDS             <1..578
                     /locus_tag="MOX77_004631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HCA3359998.1"
                     /translation="QPAQNGFRSDLLLLSPEIIARFKTMYVQDYPPANLTSLCTPMSR
                     SLTFMWENVLDAVRQGLPVGLQEHQAMGLLLALLHDGAAGPLLIERRYTLTEQVRQLI
                     MLSPAKLWTAQEIARRLAMGTSTLRRRLQRESQSYRQIIEEVRMSCALSQLQSTTLPI
                     GEIALRCGYLSGSRFTARFRQHYGCLPSQVR"
     gene            627..908
                     /gene="yccX"
                     /locus_tag="MOX77_004632"
     CDS             627..908
                     /gene="yccX"
                     /locus_tag="MOX77_004632"
                     /EC_number="3.6.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HCA3359999.1"
                     /translation="MSNVCIIAWVYGRVQGVGFRYTTQHEAQRLGLTGYAKNMDDGSV
                     EVVACGDAAQVEKLIKWLKEGGPRSARVDKILTEPHSPRETLTGFSIRY"
     gene            complement(905..1234)
                     /gene="tusE"
                     /locus_tag="MOX77_004633"
     CDS             complement(905..1234)
                     /gene="tusE"
                     /locus_tag="MOX77_004633"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusE"
                     /protein_id="HCA3360000.1"
                     /translation="MLIFEGKEISTDSEGYLKETTQWSEALAVAIAANEGIELSAEHW
                     EVVRFVREFYLEFNTSPAIRMLVKAMANKFGEEKGNSRYLYRLFPKGPAKQATKIAGL
                     PKPVKCI"
     gene            complement(1321..1980)
                     /gene="yccA"
                     /locus_tag="MOX77_004634"
     CDS             complement(1321..1980)
                     /gene="yccA"
                     /locus_tag="MOX77_004634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000375124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsH protease modulator YccA"
                     /protein_id="HCA3360001.1"
                     /translation="MDRIITSSRDRSSLLSTHKVLRNTYFLLSLTLAFSAITATASTV
                     LMLPSPGLILTLVGMYGLMFLTYKTANKPVGILSAFAFTGFLGYILGPILNAYLSAGM
                     GDVIGLALGGTALVFFCCSAYVLTTRKDMSFLGGMLMAGIVVVLIGMVANIFLQLPAL
                     HLAISAVFILISSGAILYETSNIIHGGETNYIRATVSLYVSLYNIFVSLLSILGFASR
                     D"
     gene            2375..2462
                     /locus_tag="MOX77_004635"
     tRNA            2375..2462
                     /locus_tag="MOX77_004635"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2409..2411,aa:Ser,seq:tga)
BASE COUNT          633 a          619 c          671 g          574 t
ORIGIN      
        1 atcagcctgc gcagaacggt tttcgctccg acctgttgtt actttcaccg gagattattg
       61 ctcgctttaa aacgatgtat gttcaggatt atccaccggc aaacctgaca tcgctgtgta
      121 cgccgatgag ccgtagcctg acatttatgt gggagaacgt gttggatgct gtgcgccagg
      181 ggttgcccgt tgggctacag gaacatcagg cgatggggtt actgttagcg cttttacatg
      241 atggcgcggc gggaccgctg cttattgaac ggcgttacac cctcacggag caggtgcggc
      301 aactgattat gctctcacct gctaagctat ggacagccca ggagatagcc cgccgccttg
      361 ctatgggaac atcgacgctg cgtcggcgtt tgcagcgcga atcgcagagt tatcggcaaa
      421 ttattgaaga ggtacgcatg tcctgcgcgc tttctcaact gcaatcgacg acgctgccga
      481 tcggcgaaat agcgctacgg tgcggctacc tgtcggggtc gcgatttacg gccagattcc
      541 gccaacatta tgggtgtctg cccagtcagg tacgttaagt atgtcctgta tgcgtcttca
      601 ccgttgatta tgaaaggaga accatcatgt cgaacgtctg cattatcgcc tgggtttatg
      661 gtcgcgttca gggcgtcggg tttcgctata ccacgcagca tgaggcgcag cggctggggt
      721 taaccggcta tgcgaagaat atggatgacg gaagcgtaga agtggtggcc tgtggcgacg
      781 cggcgcaggt agaaaagctc atcaagtggc tgaaagaagg cggaccgcgc tctgctcgtg
      841 tggacaaaat cctcactgaa ccgcacagcc ctcgcgagac gctaacagga tttagtattc
      901 ggtattaaat acattttacc ggcttgggca gaccggcgat tttggtcgct tgctttgccg
      961 ggcctttcgg gaacagacga tacagatagc ggctgttgcc tttttcttcg ccgaacttat
     1021 tcgccatcgc ttttaccagc attcggatgg cgggagaggt attaaactcc aggtaaaatt
     1081 cgcgcacgaa gcgcacgact tcccagtgtt ccgcagagag ctcaatgcct tcattggcgg
     1141 cgatagcgac tgccagcgct tcactccact gcgtcgtctc tttcagatag ccttcgctat
     1201 cagtactgat ttctttacct tcaaagatca acataacgtt tcactgcgta atcaacacgg
     1261 acggcagtgt agcaaaaaat aaagccctgc ataagcaggg ctggaagagg ggaatgtcga
     1321 ttagtcgcgg ctggcgaagc ccagaatgct gagcaggctg acaaagatgt tgtacagcga
     1381 aacgtacaga ctgacggtcg cacgaatata gttggtttca ccgccgtgaa tgatgttact
     1441 ggtttcatac aggatagcgc ccgaggaaat caggataaac accgcgctaa tcgccaggtg
     1501 caatgcaggc agttgcagga aaatattcgc caccatacca atcagcacga cgacgatccc
     1561 ggccattagc ataccgccca ggaaagacat atccttacgg gtggtcagaa cgtaagcgga
     1621 gcagcagaaa aatactaacg cggtaccacc cagcgccagg ccaatcacat cgcccatgcc
     1681 tgctgacaga taggcgttaa gaatcgggcc caggatatag ccgaggaagc cggtaaacgc
     1741 aaaagcagac aggataccga ccggcttatt ggcggtttta taggtcagga acatcagccc
     1801 atacataccg accagcgtca gaatcaggcc gggggagggc agcatcagta ccgtactggc
     1861 tgtcgcggta attgcggaga aagccagcgt caggctcaac agaaaatagg tgttgcgcag
     1921 tactttgtgc gtactcagta gcgagctacg atcacgcgat gatgtaatga tacgatccat
     1981 tagtcactct cttatgacag atgtaattaa taaaggagaa taataaaaac agtcactgtc
     2041 acccagtggt tttacccatc tttacgcatt cgtttacgtt tagtttcctt aagagatttc
     2101 aggtgattac cgtcgttaaa acggtctgct catgcctggc gctacgccat aaaacaggcg
     2161 gcagcgccaa ccacgcgtta ccgataaaaa attgataatc acagaggtaa aacagtgggg
     2221 acgatcaaca cgtattcagc ccgtttttgt gttgaagaaa tggtcaatgt gccgctattt
     2281 caggcaatta acgaaaattt gcctgttttt cacgcaaacg aacacattcg gtctttacat
     2341 gacgcaccgg gatgtttata gtgcgcctca ttctggaagt gtggccgagc ggttgaaggc
     2401 accggtcttg aaaaccggcg acccgaaagg gttccagagt tcgaatctct gcgcttccgc
     2461 cagattaaac aaggggttac cgaaaggtaa ccccttt
//
LOCUS       DAGWFR010000319         2480 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.322, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000319 DAGWFR010000000
VERSION     DAGWFR010000319.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2480)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2480)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2480
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.322"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            100..303
                     /locus_tag="MOX77_004636"
     CDS             100..303
                     /locus_tag="MOX77_004636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence protein MsgA"
                     /protein_id="HCA3360002.1"
                     /translation="MPTIKKLADARDVILHELILHELIGHLSCAVVTVKSMQATNVNH
                     VCTKTEKAHLHPILEKMFAVAGK"
     gene            complement(495..959)
                     /locus_tag="MOX77_004637"
     CDS             complement(495..959)
                     /locus_tag="MOX77_004637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001724370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyloxyacyl hydrolase"
                     /protein_id="HCA3360003.1"
                     /translation="MSFAAGESIRRGGVEHLYTAFLTYSEPSDFFFLQARNNLELGGF
                     KAKGSDDCSKHSGSVPCNKYNQGVLGISKDVALVHFAGIYTGIGLGAYIKSKSRDDMR
                     VNSAFTFGEKAFLGWNFGAFSTEAYIRHFSNGSLTDKNSGHNFVGASISYNF"
     gene            1787..2434
                     /gene="narP"
                     /locus_tag="MOX77_004638"
     CDS             1787..2434
                     /gene="narP"
                     /locus_tag="MOX77_004638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite response regulator protein NarP"
                     /protein_id="HCA3360004.1"
                     /translation="MPEVTPFQVLIVDDHPLMRRGIRQLLELDPAFYVVAEAGDGASA
                     IDLANRIEPDLILLDLNMKGLSGLDTLNALRRDGVTAQIIILTVSDSASDIYALIDAG
                     ADGYLLKDSDPEVLLEAIRKGANGGKVFSDRVNEYLRERERFGAQEDPFSILTERELD
                     VLHELAQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQTRGMQ"
BASE COUNT          707 a          584 c          510 g          679 t
ORIGIN      
        1 ttgtggtcgc cgtacctgcg ctgctctccg cagatgctgc ggatgaagct gccgaccaaa
       61 attccccttg aaaaccagcc tgtcagggct ggttttttta tgcctacaat taaaaagtta
      121 gctgatgcca gagacgttat tttgcatgaa ctgattttgc atgaactgat tggacatctt
      181 tcctgtgcag tggtcacagt aaagtcaatg caggcaacta acgtaaacca tgtttgtact
      241 aaaacagaaa aagcgcatct acaccctata ctggaaaaaa tgtttgcagt ggcaggtaaa
      301 tgagtaagca atctgtcgca gcaataataa aacgttctgg taaggtaaac ggcctaccac
      361 gcctttgtcg ctaacaatta gcctccctgt cgccataggg tcgataacga tcggctattc
      421 acaacacgtt ttgtagacaa cgtacggtga ttaattactc cttcagccag caactcgcta
      481 attgttattc aacttcagaa attataacta attgaagcac ctacaaaatt atgccctgaa
      541 tttttatccg taagtgatcc attcgagaaa tgccggatat aagcttctgt agaaaaagcc
      601 ccaaagttcc agccaagaaa cgctttttct ccaaaggtaa atgcagaatt gacacgcata
      661 tcatctcgcg acttagattt tatataagcc cccagaccaa taccggtata gataccagcg
      721 aaatgaacca gcgccacatc cttcgagata cccaatacgc cctggttata tttattacag
      781 ggaacgctgc cagaatgttt actgcaatca tcgctaccct tagccttaaa tcctcctaac
      841 tccagattat ttcttgcctg taaaaagaaa aaatcgctgg gttcactgta tgtcagaaaa
      901 gccgtatata agtgctcaac ccctcctctt cttatacttt ctcccgcagc aaaagagatc
      961 tgatgcttgt tgcccttgcc aaaaaaacat tatcattagc agaacatgcg aatgcacaag
     1021 gtaataatag atatataaat attctcttca tatacactcc accaccattt caatgtcaat
     1081 agttattttt aaccggctaa catatttaaa attttctacg ccacgcttac gctcacagaa
     1141 acggctgata tagcatccac actacgttct ccccttgagt cgccccaacg ggtgctcaaa
     1201 acgccgcgag tgttgttcag gcacatccag gataagttat aagtgaatga cgctcattcc
     1261 tgaccacatt ttcatttatg ataagaatat cgtcagaatc tctttatcgc ataaaaatac
     1321 ctctgctatt gacttaatat ttaatttaac agatgtcgcg gtttattcgt tctgctcaga
     1381 tgtatttcat tggcattaat aaaaccataa ataaattcaa ttaaaataat ttgttaataa
     1441 tgaaaatctt tagacgctat gacttttaat aaggaatttc ctgccagtaa agatagtctg
     1501 gacttacgga cgcaagggcg cagctacata tgccacactt ctgttatgtc acattgtccg
     1561 aaaaaagcgt ccagaccagt attcaacttc agggagtatt ctgttttctc tcacaacagg
     1621 ttgttttatc ctttctatcg ttcagctaat gactcgcctg tcacaggttt tactacttac
     1681 ccatgcacta attaaggtaa aatttacgcg cttgacaatg tggcaaatct ggacgatttc
     1741 cgcgctgaaa acaataatca ttctaataaa actcaggaga tatagcatgc ctgaagtaac
     1801 accttttcag gtgcttattg tggacgacca tccacttatg cggcgaggta ttcgtcaatt
     1861 actggaactg gacccggctt tttatgtcgt tgccgaagcg ggtgacgggg cgagtgcgat
     1921 cgatctggcg aatcgcattg agcccgatct gatcctgctg gatctgaata tgaaaggtct
     1981 gagcgggtta gataccctga acgcgctacg ccgggatggt gtgacggcgc aaattattat
     2041 tcttaccgtc tcggattccg ccagcgacat ctacgcgctg atcgacgccg gcgccgacgg
     2101 ttatctgctc aaagatagcg atccggaagt gctgctggag gccattcgca aaggcgctaa
     2161 cggcggtaaa gtctttagcg atcgggtcaa tgaatatctg cgtgagcgtg aacggtttgg
     2221 cgcgcaggaa gatcccttta gtatcctgac cgaacgagag ttagatgtct tgcatgagct
     2281 ggcgcagggg ctttctaaca aacagattgc gtcagtactg aatatttctg agcagacggt
     2341 taaggtgcac attcgtaatc tacttcgcaa gctaaacgtg cgctcgcgcg tcgcggcgac
     2401 cattctattt ttacaaacac gcggaatgca gtaacaagcc aggcccggtg gcgccacgcc
     2461 accgggccgt cagggtctta
//
LOCUS       DAGWFR010000320         2463 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.323, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000320 DAGWFR010000000
VERSION     DAGWFR010000320.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2463)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2463)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2463
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.323"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..579)
                     /locus_tag="MOX77_004639"
     CDS             complement(<1..579)
                     /locus_tag="MOX77_004639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HCA3360005.1"
                     /translation="MTIQKRLLEAVEQKLLRPIDAQFALTVAGNDDPAVTLAAALLSH
                     DAGEGHVCLPLSRLTLTEEAHPLLVAWISETATPIDWKKRLLASAAVSCGDSPAPLIL
                     CGDRLYLNRMWCNERTVARFFNEVNQAIAVDEDQLSRILDALFPPTDEVNWQKVAAAV
                     ALTRRISVISGGPGTGKTTTVAKLLAALIQMAD"
     gene            complement(576..>2463)
                     /gene="recB"
                     /locus_tag="MOX77_004640"
     CDS             complement(576..>2463)
                     /gene="recB"
                     /locus_tag="MOX77_004640"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit beta"
                     /protein_id="HCA3360006.1"
                     /translation="ISVLVRSRREAALIRDALTLLAIPSVYLSNRDSVFETLEAQEML
                     WVLQAVMAPERENTLRSALATSMMGLTALDIETLNNDENAWDAVVEEFDGYRQIWHKR
                     GVMPMLRALMSARNIAENLLATAGGERRLTDILHISELLQEAGSQLESEHALVRWLAQ
                     HILEPDSNASSQQLRLESDKHLVQIVTIHKSKGLEYPLVWLPFITHFRVQDQAFYHDR
                     HSYEAVLDLSHAEESIALAEAERLAEDLRLLYVALTRAVWHCSLGVAPLVRRRSDKKG
                     ETDVHQSALGRLLQKGEPMDAAGLRACIEALCDEDIVCRTPGNTDNDRWQIAAASHAE
                     LSARTLQRLLYDSWRVTSYSGLQQRGHSVAQDLIPRLDIDAAGVGEAAEAPAMTPHHF
                     PRGASPGTFLHSLFEELDFTQPIDPQWVQEKLELSGFETRWEPVLTRWLDTVLHVPLN
                     ETGVSLSVLTEREKQVEMEFYLPIAQPLTAGELDALIRRYDPLSAGCPALDFMQVRGM
                     LKGFIDLVFRYEGRYYLLDYKSNWLGEDSAAYTQTAMAAAMQAHRYDLQYQLYTLALH
                     RYLRHRMANYDYERHFGGVIYLFLRGVDSERPQQGIFTTRPAAALINQLDDMFAGEMS
                     EEAQ"
BASE COUNT          549 a          735 c          648 g          531 t
ORIGIN      
        1 atccgccatt tgaattaatg ccgccagcag cttcgcgacg gtggtggttt taccggtgcc
       61 gggaccgcct gaaatcacgg agatacggcg agttagcgct acggcggcgg ccaccttttg
      121 ccagttcacc tcgtctgtcg gagggaatag cgcgtccaga atacgggata actgatcttc
      181 atctacggcg atggcctggt taacctcgtt aaaaaagcgc gcaaccgtac gctcgttgca
      241 ccacatgcga ttcaggtaga ggcgatcgcc gcacagaatt aacggcgcgg ggctatcgcc
      301 gcagctaacc gccgcagacg ccagtaaccg ctttttccag tcgattggcg tagccgtttc
      361 gcttatccag gcgaccagta agggatgcgc ctcctccgtt aacgttaaac gcgacaacgg
      421 cagacacacg tgaccttcac ctgcgtcatg actaagcagc gctgccgcca gcgtcacggc
      481 gggatcgtcg ttaccggcga cggttaaagc aaactgggca tcaatgggcc gtaagagttt
      541 ttgttcaacg gcctccagca accgcttctg gattgtcatt gcgcctcctc actcatttca
      601 cctgcaaaca tatcatccag ttggttaatt aacgccgccg caggacgagt ggtaaaaata
      661 ccctgctgcg gacgttcgct atccaccccg cgtaaaaaga gatagatgac gccgccgaaa
      721 tggcgttcat agtcgtaatt cgccattcga tgacgaaggt aacgatgcaa tgccagcgta
      781 taaagctggt actgcaaatc atagcgatgc gcctgcatcg ccgcagccat cgccgtctgg
      841 gtataagcgg cgctatcctc gcccagccag ttagatttat agtcgagcag gtaatagcgc
      901 ccctcataac ggaacaccag gtcgataaag ccctttaaca tgccgcgaac ctgcatgaaa
      961 tccagcgcag ggcaacctgc tgaaagcggg tcgtatcgac gaatcaacgc atctaactct
     1021 ccggcggtaa gcggctgggc aatcggcaga taaaactcca tttcaacctg tttttcacgc
     1081 tcggtcagca cgctcagact aacgcccgtc tcgttaaggg gaacgtgcaa cacggtgtcc
     1141 agccagcggg taagtacggg ctcccatcgc gtttcaaaac cactcagctc cagtttttcc
     1201 tgtacccatt gggggtctat cggttgagta aaatcaagct cttcaaacag gctgtgcaaa
     1261 aatgttcccg gcgatgcccc gcgaggaaag tgatgcggcg tcattgccgg cgcttccgcc
     1321 gcttcgccaa cgcctgcggc gtcaatgtcg agacgaggaa taagatcttg cgccacgcta
     1381 tgtccccgct gctgcaaacc ggaataactg gtgacgcgcc agctatcata aagcaggcgt
     1441 tgcagcgttc tggcgctgag ttccgcgtgc gatgcagcgg caatttgcca gcggtcgtta
     1501 tccgtattgc ctggcgttcg acacacgata tcctcgtcgc atagcgcctc aatacaggcg
     1561 cgaaggcctg cggcatccat cggttcgcct ttttgcagga gtcgcccaag cgcgctttgg
     1621 tgcacatccg tctcgccttt cttatcgcta cgacgccgca ccagcggcgc gacgccgagg
     1681 ctgcaatgcc acactgcacg ggtcagcgcg acataaagta ggcgcaggtc ttccgccagg
     1741 cgttcggctt ccgccagtgc tatgctctct tcggcgtgac taaggtccag caccgcctcg
     1801 taggagtgcc tgtcgtgata aaaagcctgg tcctgcacgc ggaaatgggt gataaaaggt
     1861 aaccagacca gcgggtattc cagacctttc gatttatgaa tggtgacgat ttgcaccaga
     1921 tgcttatcgc tttccagacg tagttgctgg ctggaagcat tgctatcagg ttcaaggata
     1981 tgttgcgcca gccaacgcac cagcgcatgt tcgctttcca gctgcgaacc ggcttcctgt
     2041 aacagttcgc taatatgcag aatatccgtc agccgacgtt cacctcccgc cgtcgccagc
     2101 aggttttcag caatattgcg cgccgacatt agcgcgcgca gcataggcat cacgccgcgt
     2161 ttatgccaaa tctgtcggta gccatcaaac tcttcaacaa ccgcatccca cgcattttca
     2221 tcattgttaa gcgtttcgat atccagcgcg gtaaggccca tcattgatgt cgccagagcg
     2281 ctacgcagcg tattctcacg ttcgggcgcc atcaccgcct gcaacaccca cagcatttcc
     2341 tgcgcttcga gcgtttcgaa tacgctgtcg cggttagaaa gatagacgga ggggatcgcc
     2401 agtaaggtca gcgcatcccg tatcagcgcg gcttcccgcc tgctgcgcac cagcacgcta
     2461 ata
//
LOCUS       DAGWFR010000321         2425 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.324, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000321 DAGWFR010000000
VERSION     DAGWFR010000321.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2425)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2425)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2425
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.324"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..2382
                     /gene="napA"
                     /locus_tag="MOX77_004641"
     CDS             <1..2382
                     /gene="napA"
                     /locus_tag="MOX77_004641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase catalytic subunit NapA"
                     /protein_id="HCA3360007.1"
                     /translation="QEAIKWDKAPCRFCGTGCGVLVGTQQGRVVACQGDPDAPVNRGL
                     NCIKGYFLPKIMYGKDRLTQPMLRMKDGSYHKDGEFTPVSWEQAFDVMEEKFKTALKE
                     KGPEAIGMFGSGQWTIWEGYAAAKLFKAGFRSNNIDPNARHCMASAVVGFMRTFGMDE
                     PMGCYDDIEQADAFVLWGSNMAEMHPILWSRITNRRLSDPNVKVAVLSTFQHRSFELA
                     DNGIVFTPQSDLVILNYIANYIIQNNAVNQDFFTKHVNLRKGATDIGYGLRPTHPLEK
                     AAKNPGSDASEPMSFDEYKAFVAEYTLDKTAEMTGVPKDQLEQLAQLYADPNKRVISY
                     WTMGFNQHTRGVWANNLVYNLHLLTGKISQPGCGPFSLTGQPSACGTAREVGTFSHRL
                     PADMVVTNEKHRDICEKHWQIPAGTIPAKVGLHAVAQDRALKDGKLNVYWVMCNNNMQ
                     AGPNINEDRMPGWRDPRNFIIVSDPYPTVSALSADLILPTAMWVEKEGAYGNAERRTQ
                     FWRQQIKAPGEAKSDLWQLVQFSRRFKTEEVWPEALLAQKPELRGKTLYDVLFATPAV
                     SKFPLSELKEDQLNDESRELGFYLQKGLFEEYAWFGRGHGHDLAPFDDYHNARGLRWP
                     VVEGKETQWRYSEGNDPYVKAGEGYKFYGKPDGKAVIFALPFEPAAESPDNEYDLWLS
                     TGRVLEHWHTGSMTRRVPELHRAFPEAVVFIHPLDAKARDLRRGDKVKVSSRRGEVIS
                     IVETRGRNRPPQGLVYMPFFDAAQLVNNLTLDATDPLSKETDFKKCAVKLAKV"
BASE COUNT          558 a          652 c          721 g          494 t
ORIGIN      
        1 caggaagcta tcaaatggga taaagcgccg tgccgttttt gcggaacggg ttgcggtgtg
       61 ttggtgggaa cgcagcaggg ccgtgtggtc gcctgccagg gcgaccccga cgcgccggtc
      121 aaccgtggtc tgaactgcat taaaggctac ttcctgccca aaatcatgta cggtaaagat
      181 cgtctgacgc agccgatgct gcgcatgaaa gacggcagct atcacaaaga cggcgagttt
      241 acgccggtga gctgggaaca ggccttcgat gtgatggaag agaagtttaa aaccgccctg
      301 aaagagaaag gaccagaagc gatcggcatg tttggatcgg gtcaatggac catctgggaa
      361 ggctatgccg ccgcgaaact gttcaaggct ggtttccgct ctaacaacat cgacccgaac
      421 gcgcgtcact gcatggcctc ggcggtggtg ggctttatgc gcacctttgg catggatgaa
      481 ccgatgggct gctacgacga tattgagcag gccgatgcgt ttgtgctgtg ggggtccaac
      541 atggcggaga tgcacccgat tttatggtcg cgcatcacta accgccgttt gtccgacccg
      601 aatgtgaaag ttgctgtcct ctccaccttc cagcaccgta gctttgagct ggcggacaac
      661 ggtattgtct ttaccccgca aagcgatctg gtgatcctta actatatcgc gaattacatt
      721 attcagaaca acgcggtaaa tcaggatttc ttcacaaagc atgtgaatct gcgtaaaggg
      781 gcgacggata tcggctacgg cttacgcccg acgcacccgc tggaaaaagc ggcgaagaat
      841 ccgggctccg acgcttccga gccgatgagc ttcgacgagt ataaagcctt cgtggcggaa
      901 tatacgttgg acaagactgc tgaaatgacc ggcgtgccga aagatcaact ggaacagttg
      961 gcacagctct acgccgatcc gaataagcgc gtgatctctt actggacgat gggttttaac
     1021 cagcataccc gcggcgtgtg ggcgaataac ctggtttaca acctccatct gctgaccgga
     1081 aaaatctccc agcctggctg cggtcctttc tcgctgaccg gccagccttc cgcctgcggt
     1141 acggcgcgtg aagtgggaac cttctcacac cgtctgcccg cagacatggt cgtgacgaac
     1201 gaaaaacacc gtgatatctg cgaaaaacac tggcagatcc ccgctggcac tatcccggca
     1261 aaagtgggtt tacatgcggt ggcgcaggat cgcgcgttga aagacggcaa gctgaacgtc
     1321 tactgggtaa tgtgtaataa caatatgcag gccgggccga acatcaatga agatcggatg
     1381 ccgggctggc gcgatccgcg taactttatc attgtctccg atccttaccc gacggtgagc
     1441 gcgctgtctg ctgatctgat cctgccgacc gccatgtggg ttgagaaaga aggcgcttac
     1501 ggcaacgccg aacgccgcac gcagttctgg cgtcagcaaa ttaaagcgcc gggcgaagcc
     1561 aaatccgacc tctggcaact ggtgcagttc tcccgtcgtt ttaaaaccga ggaggtctgg
     1621 ccggaggcgt tgttggccca gaagccggag ctgcgcggca aaacgctgta tgacgttcta
     1681 ttcgccacgc ctgcggtcag caaattcccg ctgagcgagc tgaaagaaga tcagttaaac
     1741 gatgagtctc gtgagctggg cttctatctg caaaaagggc tatttgaaga atacgcctgg
     1801 tttggacgtg gccacggtca cgatctggcg ccgttcgacg attaccacaa cgcgcgcggt
     1861 ctgcgctggc cggtcgtcga aggcaaagag acgcaatggc gttacagcga aggcaacgac
     1921 ccgtatgtaa aagcggggga agggtacaaa ttctacggta aaccggatgg caaagcggtg
     1981 atcttcgcgc tgccatttga acccgcggcg gagtcgccgg acaacgagta cgatctgtgg
     2041 ctttccaccg gtcgcgtact ggaacactgg cataccggca gtatgacgcg ccgcgtgcct
     2101 gaattgcatc gcgccttccc ggaagcggtg gtctttattc acccgctgga tgcgaaagcg
     2161 cgcgatctgc gtcgtgggga taaggttaaa gtgtcgtccc gccgcggcga agtgatttcg
     2221 attgtcgaaa cgcgtggacg taaccgtccg ccgcagggac tggtgtatat gccgttcttc
     2281 gatgccgctc agctagtgaa caacctgacg ctggatgcga cggacccgct ctctaaagag
     2341 acggacttca agaagtgcgc cgttaagctg gcgaaggtgt aacgcgttat gtcccgtaca
     2401 gcgaaacccc aaaatggccg ccgcc
//
LOCUS       DAGWFR010000322         2388 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.325, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000322 DAGWFR010000000
VERSION     DAGWFR010000322.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2388)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2388)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2388
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.325"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..1541)
                     /gene="tyrR"
                     /locus_tag="MOX77_004642"
     CDS             complement(<1..1541)
                     /gene="tyrR"
                     /locus_tag="MOX77_004642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator TyrR"
                     /protein_id="HCA3360008.1"
                     /translation="MRLEVFCEDRLGLTRELLDLLVLRSIDLRGIEIDPIGRIYLNFA
                     ELEFTDFSSLMAEIRRISGVTDVRTVPWMPSEREHLALSALLEALPEPVLSLDMKSKV
                     EMANPASCQLFAQSQERMRHHTAAQLINGFNFQRWLDGNPQSSHNEHVVINGQNFLME
                     ITPVHLQNENDEYVLTGAVVMLRSTIRMGQQLQNLSTQDLSAFSQIIAVSAKMKHVVE
                     QARKLAMLSAPLLITGDTGTGKDLFAYACHQASPRSAKPYLALNCASIPEDAVESELF
                     GHAPEGKKGFFEQANGGSVLLDEIGEMSPRMQAKLLRFLNDGTFRRVGEDHEIHVDVR
                     VICATQKNLVELVQKGLFREDLYYRLNVLTLNLPPLRDCPQDIMPLTELFVARFADEQ
                     GVPRPKLSADLSTVLTRYGWPGNVRQLKNAIYRALTQLEGYELRPQDILLPDYDAATV
                     AVGEDAMEGSLDDITSRFERSVLTQLYRSYPSTRKLAKRLGVSHTAIANKLREYGLSQ
                     KKGEE"
     gene            complement(1689..>2388)
                     /locus_tag="MOX77_004643"
     CDS             complement(1689..>2388)
                     /locus_tag="MOX77_004643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TIGR01620 family protein"
                     /protein_id="HCA3360009.1"
                     /translation="EWWRLWRLRQRAHERDEARELLHSHSVVKGRAFCEKLAQQAGID
                     QSHPALQRWYAAIHETQNDREIVGLYAHLVQPVLDAQARREISRFAAESTLMIAVSPL
                     ALVDMAFIAWRNLRLINRIATLYGIELGYYSRLRLFRLVLLNIAFAGASELVREVGMD
                     WMSQDLAARLSTRAAQGIGAGLLTARLGIKAMELCRPLPWADNDKPRLGDFRRQLIGQ
                     LKETLQKSKSSPEK"
BASE COUNT          582 a          692 c          585 g          529 t
ORIGIN      
        1 tactcttcac ccttcttctg gctcagacca tattcacgca gcttattggc aatcgcggta
       61 tgcgataccc ccaaccgttt cgccagttta cgcgtactcg gatagctacg ataaagctga
      121 gtaaggacag aacgttcgaa acgactggta atgtcatcca gcgaaccttc catcgcatcc
      181 tcgccgactg ccaccgtcgc ggcatcgtag tcaggcaaca ggatgtcctg cggacgcagc
      241 tcataccctt ccagttgcgt cagcgcccga taaatcgcat ttttaagctg gcgaacgtta
      301 cccggccagc cgtaacgagt gaggaccgta ctcagatcgg cagacagttt cggtcgtgga
      361 acgccctgtt cgtcggcaaa acgcgccacg aacagttcgg tcaacggcat aatatcctgc
      421 ggacaatcgc gcaacggcgg caaattaagc gtcagaacgt taagtcgata atagagatct
      481 tcgcggaaca gtcctttttg caccagctcc accagatttt tctgcgtggc gcagataacg
      541 cggacatcaa catgaatttc gtgatcttcg ccgacacgac ggaacgtacc atcattgaga
      601 aaacgcagca gcttcgcctg catacgcggt gacatttcgc caatttcatc cagcagcacc
      661 gagccgccat tcgcctgttc aaaaaagcct tttttacctt ccggcgcatg gccaaatagt
      721 tcgctttcta ccgcatcttc cgggattgaa gcgcagttga gcgccagata cggtttcgct
      781 gaacgagggc ttgcctgatg acaggcatag gcgaaaagat ctttgccggt tcccgtatcg
      841 ccggtaatca gcagcggcgc gctgagcatc gccagtttgc gcgcctgctc aacgacgtgc
      901 ttcatctttg cgctcacggc aataatctga ctaaacgcgc tcagatcctg cgtggacaaa
      961 ttctgtagct gctgtcccat acgaatcgtg gaacgcaaca tcacgaccgc cccggtcaac
     1021 acgtattcgt cattttcgtt ttgtaaatgt accggcgtaa tctccatcag gaagttttgc
     1081 ccgttgatca cgacatgttc gttatgggag ctttgcgggt taccgtccag ccagcgctga
     1141 aaattgaagc cgttgattaa ttgtgcggcg gtatggtgcc gcattcgctc ctggctctgg
     1201 gcaaaaagtt gacaactcgc cgggttcgcc atctccactt tactcttcat atccaatgag
     1261 agcaccggct ccggcaacgc ctcaagcagc gcgctcaggg ccagatgttc acgttcggac
     1321 ggcatccagg gaacggtacg gacatccgtt acgccggaaa tacggcggat ttcggccatc
     1381 aggctgctga agtcggtgaa ttccagctca gcaaaattaa gataaattcg cccaatggga
     1441 tcaatctcga ttccgcgtaa atcaatgcta cgtaacacca gtaaatcaag taattcgcgg
     1501 gtcagaccaa gtcggtcttc acaaaagact tccagacgca tgggaacctt cacctgaata
     1561 atgaaccatt aaatagatga taagccacta ttcggctggc aggaaggatt ctgtcaacaa
     1621 atattgacag catggcggaa aaacgggcgc tgcggcgtaa agccaggcaa tcagcgccct
     1681 gtggaaggtc atttctcagg cgacgactta ctcttttgca gcgtctcttt tagctgaccg
     1741 ataagctgac gacgaaaatc accgagacgt ggtttatcgt tatcggccca cggcaatggt
     1801 cgacatagct ccatcgcttt tattcccagt cgagcggtaa ggaggcctgc gccaatcccc
     1861 tgcgccgcgc gcgtagacag gcgtgcggcc agatcctgag acatccagtc cataccgact
     1921 tcacgcacca gctcactggc ccccgcaaac gcgatattca gcaacaccag acggaacaga
     1981 cgaaggcggc tgtaataacc aagttcaatg ccatacagcg ttgcgatgcg gttaatcagg
     2041 cgtaaattac gccaggcaat aaacgccata tccaccaacg ctaacggact gacagcgatc
     2101 atcagagtcg attccgcggc gaaacggcta atctcacgtc gcgcctgcgc gtcaagtacc
     2161 ggctgtacca gatgcgcata caagccgacg atttccctgt cgttttgcgt ttcgtgaata
     2221 gcggcatacc aacgttgtaa tgccggatgt gattgatcaa tccccgcctg ctgcgccagt
     2281 ttttcgcaaa atgcgcgacc tttcacgacg ctatggctat gtaacagttc acgcgcctca
     2341 tcgcgctcat gcgcccgctg gcgcaagcgc cataatcgcc accactcc
//
LOCUS       DAGWFR010000323         2365 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.326, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000323 DAGWFR010000000
VERSION     DAGWFR010000323.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2365)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2365)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2365
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.326"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..546)
                     /locus_tag="MOX77_004644"
     CDS             complement(<1..546)
                     /locus_tag="MOX77_004644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HCA3360010.1"
                     /translation="MQALLEHFITQSTLYSLIAVLLVAFLESLALVGLILPGTVLMAG
                     LGALIGSGELNFWHTWLVGIIGCLMGDWISFWLGWRFKKPLHRWSFMKKNKSLLDKTE
                     HALHQHSMFTILVGRFVGPTRPLVPMVAGMLDLPVAKFIGPNLIGCLLWPPFYFLPGI
                     LAGAAIDIPSDMQSGDFKWLLL"
     gene            complement(665..1510)
                     /gene="araC"
                     /locus_tag="MOX77_004645"
     CDS             complement(665..1510)
                     /gene="araC"
                     /locus_tag="MOX77_004645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose operon transcriptional regulator AraC"
                     /protein_id="HCA3360011.1"
                     /translation="MAETQNDPLLPGYSFNAHLVAGLTPIEANGYLDFFIDRPLGMKG
                     YILNLTIRGEGVINNNGEQFVCRPGDILLFPPGEIHHYGRHPDASGWYHQWVYFRPRA
                     YWQEWLTWPTIFAQTGFFRPDEARQPHFSELFGQIISAGQGEGRYSELLAINLLEQLL
                     LRRMAVINESLHPPMDSRVRDACQYISDHLADSHFDIASVAQHVCLSPSRLSHLFRQQ
                     LGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEF
                     RARCE"
     gene            1851..>2365
                     /locus_tag="MOX77_004646"
     CDS             1851..>2365
                     /locus_tag="MOX77_004646"
                     /EC_number="2.7.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459108.1"
                     /note="catalyzes the phosphorylation of ribulose to
                     ribulose 5-phosphate; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulokinase"
                     /protein_id="HCA3360012.1"
                     /translation="MAIAIGLDFGSDSVRALAVDCATGDEIATSVEWYLRWQEGRYCD
                     GPNNQFRHHPRDYMESMEAALKAVLAQLSAAQRANVVGIGVDSTGSTPAPIDADGNVL
                     ALRPEFAENPNAMFVLWKDHTAVEEADEITRLCHKPGKVDYSRYIGGIYSSEWFWAKI
                     LHVTRQDSAVA"
BASE COUNT          590 a          670 c          594 g          511 t
ORIGIN      
        1 cagcagcagc catttgaaat ctccgctctg catatcggaa ggaatatcga ttgccgctcc
       61 cgccagaatg cccggcagga aataaaacgg cggccacagc aaacagccaa tcaagtttgg
      121 cccaataaat ttcgctacgg gaagatccag catccctgcc accatcggca ccagcggcct
      181 cgtcggaccg acaaaacgtc cgaccaggat cgtgaacata ctgtgctgat gcagcgcatg
      241 ttcggtttta tccagcagcg acttgttctt tttcataaaa gaccagcggt gtagcggctt
      301 tttaaagcgc caccccagcc agaacgaaat ccagtcgccc atcagacagc cgataatacc
      361 caccagccag gtatgccaaa aattgagctc gccgctgccg ataagcgcgc ccagccccgc
      421 catcagtacc gtgccgggta aaatcaaccc caccagcgcc agcgattcca ggaaggcgac
      481 cagcaacacg gcgatgagcg aatacagagt ggattgggta ataaagtgtt ccagcagtgc
      541 ttgcatagtg tgtccgtcag cgtgatgaag cagggattct gcttaccccg tcccccttcg
      601 tcaagccgtc aattatccga atagttacgg cttatgacat ctttgtggac acatcattca
      661 ctttttattc acatctggcc ctgaactcgc taggacttgc cccggtgcat tttttaaata
      721 cccgcgaaaa atagagctga tcgtcaaatc caacattgcg cccaacggtc gctatcggca
      781 ttcgcgtggt gctaagcagg agtttcgcct ggctgatacg ctgatcttcg cgccagctca
      841 atacgctaat gcctaactgc tggcggaaca gatgcgataa ccgggagggc gacaggcaga
      901 catgctgggc gacgctggcg atatcaaaat gactgtctgc cagatggtcg ctgatatact
      961 ggcaggcatc gcgcacacgg ctatccatcg gcggatgcaa cgactcatta attaccgcca
     1021 tacgtctgag caacaactgc tccagcagat tgatcgccag tagctcagaa tagcgacctt
     1081 ccccttgccc ggcgctgatg atctgcccga acagttcgct gaaatgcggc tggcgcgcct
     1141 cgtccgggcg gaaaaatcct gtctgagcaa agattgtcgg ccaggtcagc cactcctgcc
     1201 agtaggcgcg aggccggaaa taaacccact ggtgatacca cccgctggca tccggatgcc
     1261 gtccatagtg atgaatctcg cccggcggaa acaataatat atcgccaggc cgacagacaa
     1321 actgctcgcc attattatta atgacgccct ctccgcggat ggtcaggtta agaatatatc
     1381 ccttcatgcc caacggacga tcgataaaaa aatccagata tccattcgct tcaattggcg
     1441 tcagcccggc gaccagatgg gcattaaatg aatatcccgg caatagcgga tcattttgcg
     1501 tttcagccat gatttctcta ccccccgatg ttcagagaag aaacaaattg tccatattga
     1561 ccaggacgac agagcttccg tctccgcaag accttgcgct tgatgaaagc acgtatcaac
     1621 cccgcttgtg aaaagcgctt tgtaacaaaa gcgtacagtt caggcgataa aattaagtaa
     1681 cagaagtgtc tataactatg gctggaatgt ccacattgaa tatttgcaca gcgtcacact
     1741 ttgcaaagca ttagcatttt tgtccataag attagcggat cctgcctgac ggtttttgcc
     1801 gcgactctct actgtttctc catacctgtt tttctggatg gagtaagacg atggcaattg
     1861 caattggcct cgattttggc agtgattcag tgcgcgctct ggcagtggac tgcgccaccg
     1921 gcgacgagat cgccaccagc gtagagtggt atctgcgctg gcaagaaggc cgttattgcg
     1981 acggcccgaa caaccagttc cgtcatcatc cgcgcgacta catggagtca atggaggccg
     2041 cgctgaaagc cgttctggca caattaagcg ccgcgcaacg cgcaaatgtc gttggcattg
     2101 gcgttgacag caccggttct acgccagcgc cgattgacgc cgacggtaac gtcctggcgc
     2161 tgcgtccgga gttcgccgag aacccgaatg cgatgtttgt gctgtggaaa gatcacaccg
     2221 ccgtggaaga agccgacgaa atcactcgtc tgtgccataa gccaggtaag gtcgactact
     2281 cccgctatat tggcggcatt tactccagcg aatggttctg ggcgaagatt ctgcacgtca
     2341 cccgccagga tagcgccgtc gcgca
//
LOCUS       DAGWFR010000324         2347 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.327, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000324 DAGWFR010000000
VERSION     DAGWFR010000324.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2347)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2347)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2347
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.327"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..245
                     /locus_tag="MOX77_004647"
     CDS             <1..245
                     /locus_tag="MOX77_004647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459908.1"
                     /note="catalyzes the cleavage of the bond between muamic
                     acid and l-alanine; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HCA3360013.1"
                     /translation="AQRVAFYLAGRAPYTPVDTATVLALLSRYGYEVKADMTAREQQR
                     VIMAFQMHFRPAQWNGIADAETQAIAEALLEKYGQD"
     gene            complement(242..1255)
                     /locus_tag="MOX77_004648"
     CDS             complement(242..1255)
                     /locus_tag="MOX77_004648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HCA3360014.1"
                     /translation="MKVLVTGATSGLGRNAVEFLRNKGISVRATGRNEAMGKLLEKMG
                     AEFVHADLTELVSSQAKVMLAGIDTLWHCSSFTSPWGTQQAFDLANVRATRRLGEWAV
                     AWGVRNFIHISSPSLYFDYHHHRDIKEDFRPHRFANEFARSKAAGEEVINLLAQANPQ
                     TRFTVLRPQSLFGPHDKVFIPRLAHMMHHYGSVLLPHGGSALVDMTYYENAIHAMWLA
                     SQPGCDHLPSGRAYNITNGENRTLRSIVQKLIDELTIDCRIRSVPYPMLDMIARSMER
                     FGKKSAKEPPLTHYGVSKLNFDFTLDTTRAQDELGYQPIVTLDEGIERTAAWLRDHGN
                     LPR"
     gene            complement(1351..>2347)
                     /locus_tag="MOX77_004649"
     CDS             complement(1351..>2347)
                     /locus_tag="MOX77_004649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2867 domain-containing protein"
                     /protein_id="HCA3360015.1"
                     /translation="IIVGAGSAAFEVMRDMVYNLPILTPPRWVRSRTTPIALENLLYY
                     LVGLLEHPAHEHRILEAAGPQVLSYQQQFERFMAVSGKRRPLIPVPFPTRWISVWFLN
                     VITSVPPTTAKALIQGLRHDLLADDAALKKLIPQTLITFDDAVRRTLKEEEKLVNSSD
                     WGYDALAFARWRPEYGYFPKQAGFTAQTPASLSALWQVVNRLGGKEGYFFGNILWQTR
                     AAMDRLVGHKLAKGRPSHTLLKPGDTVDSWKVIIVEPEKQLTLLFGMKAPGLGRLSFT
                     LHDKGRYREIDVRAWWHPHGMPGLIYWLLMIPAHLFIFRGMARRIARLAEQITEK"
BASE COUNT          525 a          634 c          668 g          520 t
ORIGIN      
        1 acgcccagcg tgtggcgttt tatctggctg gacgcgcgcc gtatacgcca gtcgataccg
       61 caacggtgct tgcgttactc tcgcgctatg gctatgaagt caaagccgat atgacggcgc
      121 gcgagcaaca gcgggtgatt atggcgttcc agatgcactt ccgtccggcg caatggaacg
      181 gtatcgcaga tgccgaaacg caggcgattg ccgaagcatt actggagaag tacggccagg
      241 attaacgcgg taaatttccg tgatcgcgca gccaggcggc ggtgcgctca atgccttcgt
      301 ccagcgtgac gatgggctgg tagcccagct cgtcctgcgc gcgagtcgta tcgagcgtaa
      361 aatcaaaatt cagttttgac acgccgtaat gcgttagcgg gggctctttg gcggattttt
      421 tgccgaagcg ctccatactg cgggcgatca tatccagcat cgggtaaggc acagagcgaa
      481 tgcggcagtc gatagtcaat tcatcaatta acttttgtac gatgctgcgt aaggtgcggt
      541 tttcgccgtt agtgatgtta taagcgcggc cagaaggcag atgatcgcag cccggctggc
      601 tggccagcca catggcgtgg atcgcatttt catagtaggt catatcgacc agcgcgctgc
      661 ccccgtgcgg taataagacg ctaccgtaat ggtgcatcat atgcgccaga cgtgggataa
      721 atactttatc gtgcgggcca aacaggcttt gtggacgcaa taccgtaaaa cgtgtttgcg
      781 gattggcctg cgccaacaga ttaatcacct cttcgccggc ggctttactg cgggcgaact
      841 cattggcaaa ccgatgcggg cggaaatctt ctttgatatc acggtgatgg tggtaatcaa
      901 aatagagcga gggagaggag atatgaataa aattgcgcac gccccaggcg accgcccatt
      961 ctcccagacg gcgggtggcg cgaacattcg ccagatcgaa agcctgttgg gttccccagg
     1021 gcgaggtaaa gctggagcag tgccacaacg tgtcgatccc ggcaagcatc actttagcct
     1081 gcgaggagac cagttcggtt aaatccgcat ggacgaattc cgcgcccatt ttttcaagca
     1141 gcttgcccat cgcttcattg cgacccgtcg ctctgacgct gatgccttta ttgcgcaaaa
     1201 attcaaccgc gtttcgacct aagccgctgg tggcgccggt aaccagtacc ttcatatcaa
     1261 tccactgtgt ttaataaacc gtcgtgcgca ttcttccgtg aattacgtcg gtatgcaatg
     1321 ggaaacacga aagaatacag caactttttc tcatttttct gtgatttgtt ctgcaagtcg
     1381 ggcaatacgc cttgccattc cccggaaaat aaacaggtgc gccgggatca tcagtagcca
     1441 gtaaatcagg cccggcattc cgtgtggatg ccaccaggcg cgcacgtcaa tttcgcggta
     1501 gcggccttta tcgtgcagcg tgaagctaag ccgccccaga cccggcgctt tcatgccaaa
     1561 caagagcgtg agctgttttt ctggttcgac aatgatcact ttccagctat ctaccgtatc
     1621 gccaggcttg agcaaggtat gcgacgggcg gcctttcgcc agtttatgcc ccaccagacg
     1681 gtccatcgcg gcgcgcgtct gccacaaaat attgccgaaa aaatagccct ctttgccacc
     1741 cagccgattt acgacctgcc atagcgccga taggctggcc ggggtctgcg cggtaaagcc
     1801 cgcctgcttt ggaaaatagc cgtattcggg acgccagcgg gcgaaggcca gcgcgtcgta
     1861 gccccagtcg ctggagttca ccagtttttc ttcttctttc agcgtgcggc gaacggcgtc
     1921 atcaaaggtg ataagcgttt gggggatcaa cttttttaac gcggcgtcat cggccagcaa
     1981 atcgtgcctt aatccctgga ttaacgcttt tgcggtagtt ggcggcacgg aggtaatgac
     2041 gtttaaaaac cagaccgaaa tccagcgggt cggaaaaggc accgggatca gcggacgccg
     2101 tttaccgctg acggccataa aacgttcaaa ctgctgctga taacttaata cctgcggccc
     2161 ggcggcttcc agaatacgat gctcgtgcgc agggtgctcc agtaagccga ccaggtagta
     2221 gagtaaattt tccagggcga tgggcgtggt gcgcgaacgc acccagcgcg gcggcgtgag
     2281 tattggcagg ttgtaaacca tgtcgcgcat gacctcaaag gcggcggagc ctgcgccgac
     2341 gatgatc
//
LOCUS       DAGWFR010000325         2312 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.328, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000325 DAGWFR010000000
VERSION     DAGWFR010000325.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2312)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2312)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2312
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.328"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..645)
                     /gene="fliH"
                     /locus_tag="MOX77_004650"
     CDS             complement(<1..645)
                     /gene="fliH"
                     /locus_tag="MOX77_004650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliH"
                     /protein_id="HCA3360016.1"
                     /translation="MSNELPWQVWTPDDLAPPPETFVPVEADNVTLTDDTPEPELTAE
                     QQLEQELAQLKIQAHEQGYNAGLAEGRQKGHAQGYQEGLAQGLEQGQAQAQTQQAPIH
                     ARMQQLVSEFQNTLDALDSVIASRLMQMALEAARQVIGQTPAVDNSALIKQIQQLLQQ
                     EPLFSGKPQLRVHPDDLQRVEEMLGATLSLHGWRLRGDPTLHHGGCKVSADEGDL"
     gene            complement(638..1633)
                     /gene="fliG"
                     /locus_tag="MOX77_004651"
     CDS             complement(638..1633)
                     /gene="fliG"
                     /locus_tag="MOX77_004651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliG"
                     /protein_id="HCA3360017.1"
                     /translation="MSNLSGTDKSVILLMTIGEDRAAEVFKHLSTREVQALSTAMANV
                     RQISNKQLTDVLSEFEQEAEQFAALNINANEYLRSVLVKALGEERASSLLEDILETRD
                     TTSGIETLNFMEPQSAADLIRDEHPQIIATILVHLKRSQAADILALFDERLRHDVMLR
                     IATFGGVQPAALAELTEVLNGLLDGQNLKRSKMGGVRTAAEIINLMKTQQEEAVITAV
                     REFDGELAQKIIDEMFLFENLVDVDDRSIQRLLQEVDSESLLIALKGAEPPLREKFLR
                     NMSQRAADILRDDLANRGPVRLSQVENEQKAILLIVRRLAETGEMVIGSGEDTYV"
     gene            complement(1626..>2312)
                     /gene="fliF"
                     /locus_tag="MOX77_004652"
     CDS             complement(1626..>2312)
                     /gene="fliF"
                     /locus_tag="MOX77_004652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar M-ring protein FliF"
                     /protein_id="HCA3360018.1"
                     /translation="TNQQNAQNTPQTSTSTNSNNAGPRNTQRNETSNYEVDRTIRHTK
                     MNVGDIERLSVAVVVNYKTLADGKPLPLTADQMKQIEDLTREAMGFSDKRGDTLNVVN
                     SPFSAVDNTGGELPFWQQQSFIDQLLAAGRWLLVLVVAWILWRKAVHPQLTRRVEEAK
                     AAQEQAQVRQETEEAVEVRLSKDEQLQQRRANQRLGAEVMSQRIREMSDNDPRVVALV
                     IRQWMSNDHE"
BASE COUNT          424 a          690 c          620 g          578 t
ORIGIN      
        1 cagatcgccc tcatcggcag agactttaca cccgccgtga tgcaacgttg gatcgccgcg
       61 caaccgccat ccgtgaagac tgagcgtggc gcccagcatc tcttccaccc gctgtaagtc
      121 gtccggatgc acgcgcaact gcggcttgcc gctaaagagc ggctcttgct gcaacagttg
      181 ttggatctgt ttaatcagcg ctgagttgtc caccgccggc gtttggccga tgacctgacg
      241 tgcggcctcc agggccattt gcatcagccg tgaggcgata acgctatcga gcgcgtcaag
      301 cgtgttctga aactcgctca ctaactgctg catacgggca tgaatcggcg cctgctgcgt
      361 ctgcgcctgg gcttgtcctt gctccagccc ttgcgctaac ccttcctggt atccctgcgc
      421 gtgtcctttt tgccgtccct ccgccagccc ggcgttataa ccttgttcat gggcctgtat
      481 ttttagctgc gccagctcct gctccagctg ctgttcggca gtgagttcgg gctccggcgt
      541 atcgtctgtc aaggtaacgt tatcagcctc aaccggcaca aacgtctccg gcggcggagc
      601 gagatcgtcg ggggtccaga cttgccacgg caattcatta gacataggta tcctcgccgc
      661 tgccaatcac catttcgccg gtttccgcca gacgacgcac aataagcaga atcgctttct
      721 gctcgttttc cacctgagac agacgaaccg ggccacggtt ggcaaggtcg tcgcgcagga
      781 tatcggcggc gcgctgggac atattgcgca ggaacttctc gcgtaatggc ggttcggcgc
      841 ctttcagagc gatcagcagc gactcggaat ccacttcctg cagcagacgt tggatactgc
      901 gatcgtccac atccaccaga ttttcgaaca ggaacatctc gtcgatgatt ttctgcgcca
      961 gttcgccgtc gaattcgcgc acagcggtaa taaccgcttc ttcctgctgc gttttcatca
     1021 ggttgataat ttctgccgcg gttcttacgc cgcccatttt gctgcgtttc aggttctgac
     1081 cgtcgagcag gccattcagc acttcggtca actccgccag cgccgccggc tgtacgccgc
     1141 caaatgtcgc gatacgcagc atcacatcat gacgcagtcg ttcgtcaaac agtgccagaa
     1201 tatcggcggc ctgactgcgt ttgaggtgga ccagaatggt ggcgataatc tgcgggtgtt
     1261 cgtcgcgaat caggtcggcg gcgctctgcg gttccataaa gttgagcgtt tcgataccgc
     1321 tggtggtatc gcgcgtttcc agaatatctt ccagcaggct ggaggcgcgt tcttcgccca
     1381 gcgctttaac cagtacggag cgcaggtatt cgttggcgtt gatattcagc gcggcgaact
     1441 gctccgcttc ttgctcaaac tctgatagta cgtccgtcag ttgtttgttg gagatctgac
     1501 gcacgttagc catcgccgta cttaacgcct gtacttcgcg ggtggagagg tgtttaaaca
     1561 cctctgccgc ccggtcttcg ccaatggtca tcaacaaaat gacgctttta tcggtaccgc
     1621 taagattact catgatcgtt actcatccac tggcgaatga ccagcgccac cacgcgcgga
     1681 tcgttgtctg acatttcgcg aatacgctgg ctcatcacct cagcgcccag acgctggtta
     1741 gcccggcgtt gctggagctg ctcgtctttg ctaaggcgta cttccacggc ttcttcggtt
     1801 tcctggcgaa cctgcgcctg ttcctgcgcc gctttcgctt cttcaacgcg gcgcgtcaac
     1861 tgtggatgta ccgctttgcg ccacagaatc caggccacca ccagcaccag taaccagcga
     1921 cctgccgcga gcaactgatc gataaaggac tgctgttgcc agaagggcag ttcgccgccg
     1981 gtgttatcca ctgcgctaaa cggtgaattc accacgttta gcgtatcgcc gcgtttatca
     2041 gaaaaaccca tcgcttcacg ggttaaatcc tcgatctgtt tcatctgatc ggcggtcaat
     2101 ggcagcggtt tgccatccgc cagcgttttg taattcacca cgacagctac agagagacgc
     2161 tcaatatcgc ccacattcat tttggtgtga cgaatggtgc ggtccacttc gtagttactg
     2221 gtttcattac gctgcgtatt gcgcgggcca gcgttgttac tgttggtact ggtgctggtt
     2281 tgtggcgtat tctgcgcgtt ttgttgattg gt
//
LOCUS       DAGWFR010000326         2311 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.329, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000326 DAGWFR010000000
VERSION     DAGWFR010000326.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2311)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2311)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2311
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.329"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..883)
                     /locus_tag="MOX77_004653"
     CDS             complement(<1..883)
                     /locus_tag="MOX77_004653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsC"
                     /protein_id="HCA3360019.1"
                     /translation="MRKFTLSLMHAFLLAGGRNALPGKRGVSRALLGLSLGMALTPLA
                     GAATSAQQQLLEQVRLGEATHREDLVRQSLYRLELIDPNDPQVIAARFRYLLRQGDSD
                     GAQKLLDRLAQLAPESTAYQSSRTAMLLSTPQGRQSLQEARLLATTGHTEQAIASYDK
                     LFKGYPPEGELAVEYWTTVAKLPARRHEAINQLQKINAVSPGNNALQNALAQLLFASG
                     RRDEGFAVLKQMAKSSTGRSAASAIWYQQIKDLPVSDASVKALQDYLTQFSEGDSVSA
                     ARAQLSEQQKQLADPAFR"
     gene            complement(865..1974)
                     /gene="bcsZ"
                     /locus_tag="MOX77_004654"
     CDS             complement(865..1974)
                     /gene="bcsZ"
                     /locus_tag="MOX77_004654"
                     /EC_number="3.2.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulase"
                     /protein_id="HCA3360020.1"
                     /translation="MMTMLRGWITMIVMLTAINAQAACSWPAWEQFKKDYISQQGRVI
                     DPGDARKITTSEGQSYAMFFALAANDRPAFAQLFNWTQNNLAQGSLREHLPAWLWGQK
                     DPDTWSVLDSNSASDGDIWMAWSLLEAGRLWKETRYTEVGTALLKRIAREEVVNVPGL
                     GSMLLPGKIGFAEANSWRFNPSYLPPQLAQYFSRFGAPWSTLRETNLRLLLETSPKGF
                     SPDWVRYESKQGWQLKAEKTLISSYDAIRVYLWTGMMHDGDPQKARLLARFKPMATLT
                     MKNGVPPEKVDVVSGNAQGTGPVGFSAALLPFLQNRGAQAVQRQRVADHFPGSDAYYN
                     YVLTLFGQGWDQHRFRFTVKGELLPDWGQECVSSR"
     gene            complement(1978..>2311)
                     /locus_tag="MOX77_004655"
     CDS             complement(1978..>2311)
                     /locus_tag="MOX77_004655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462519.1"
                     /note="binds the cellulose synthase activator, bis-(3'-5')
                     cyclic diguanylic acid (c-di-GMP); Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cellulose synthase regulator BcsB"
                     /protein_id="HCA3360021.1"
                     /translation="PFNDQRSVIALLADSPRGYQLLNDAVNDSGKRAAMFGSVAVIRE
                     SGVHSLRVGDIYYVGHLPWFERLWYALANHPVLLAVLAALSVVLLAWVLWRLLRILSR
                     RRLDPDHE"
BASE COUNT          484 a          720 c          625 g          482 t
ORIGIN      
        1 cgcgaaacgc cggatcggct aactgttttt gctgctcgct aagctgggcg cgggcggcag
       61 acacgctatc gccttcgcta aactgcgtca gatagtcttg caacgctttt acgctggcgt
      121 cgctaaccgg gagatctttt atctgctggt accagatggc ggaggccgcg ctgcgtcccg
      181 tactggattt cgccatctgt tttagcaccg cgaatccctc atcgcgccgc ccgctggcga
      241 acaacagttg cgccagcgca ttttgcagag cgttattacc cggactgacg gcattgattt
      301 tctgtagctg gttaatcgct tcgtgacggc gggcgggcaa tttcgccacg gtcgtccagt
      361 attcgaccgc cagttcgccc tccggcggat aacctttaaa cagcttgtcg tagctggcga
      421 tcgcttgttc agtatgaccg gtcgtcgcca gtaaacgcgc ctcctgcaaa gactggcgtc
      481 cttgcggcgt ggagagcagc atcgcggtgc gggaagattg atacgccgtc gactccggcg
      541 ccagttgcgc cagccgatca agtagcttct gcgccccgtc gctatccccc tggcgcaaca
      601 gatagcggaa acgggcggcg ataacctgtg gatcattggg gtcgatcagc tccaggcgat
      661 agagcgactg acggactaag tcctcacggt gcgtggcctc gcccagccgc acctgctcca
      721 gcaactgttg ctgcgcggag gtcgctgcgc cggcaagcgg tgttagcgcc ataccaagcg
      781 ataaccccaa caatgcccga gaaacgcccc ttttgccagg taaggcattt cgaccgccag
      841 ccagcaaaaa agcgtgcatg agacttaacg tgaacttacg cattcctggc cccagtcagg
      901 taataattca cctttgacgg tgaagcgaaa acggtgctga tcccagcctt gtccaaagag
      961 agtcagcaca tagttgtaat aggcatcgct gccaggaaaa tggtctgcga cccgctgtcg
     1021 ctgcacggcc tgggcgccgc gattttgcag gaaaggcagt aaagcggcgg aaaacccgac
     1081 cggccccgtc ccttgcgcat tcccgctgac gacatccact ttctccggtg gaacgccgtt
     1141 tttcatcgtt aacgtcgcca tcggtttaaa tcgcgccagt aaacgcgctt tttgcggatc
     1201 gccatcatgc atcattcccg tccataaata gacgcgaatc gcatcgtagc tactgatcag
     1261 cgtcttttcc gctttcaact gccagccttg cttgctttca taacgcaccc agtccggcga
     1321 gaaacctttc ggcgaggttt ccaacaaaag ccgcaaattg gtttcccgta gcgtcgacca
     1381 cggcgcgcca aaacggctaa agtattgcgc caactgcggc ggcagatagc ttgggttaaa
     1441 acgccagcta ttcgcctcgg caaagccgat tttgccaggt agcagcattg agcccagccc
     1501 cggcacattc acgacctctt cgcgggcgat gcgttttagc aacgccgtgc ccacctcggt
     1561 ataacgcgtc tctttccaca ggcgaccggc ctccagcagc gaccatgcca tccagatatc
     1621 gccgtcggac gcggagttgc tgtccagcac cgaccaggtg tcgggatctt tttgtcccca
     1681 cagccaggcg ggcagatgtt cacgcagcga tccctgcgcc agattgtttt gcgtccagtt
     1741 aaacagttgc gcgaacgccg gtcgatcgtt cgccgccagg gcaaagaaca tggcgtagct
     1801 ctgcccttcg gaggtggtaa tttttcgcgc atcgcccgga tcgataacgc gtccctgctg
     1861 gctaatgtaa tctttcttga actgttccca cgcaggccag ctacacgctg cctgcgcatt
     1921 tattgccgtc agcatgacga tcatcgttat ccatccgcgc agcatagtca tcatgcgtta
     1981 ctcatggtca gggtcgagac gacggcgact gagaatacgt agcagacgcc acaataccca
     2041 cgccagtaat accacactga gggccgccag taccgccagc agcaccgggt gattcgccag
     2101 cgcataccac agccgctcaa accacggcag atgtccgacg taatagatat cgccaacgcg
     2161 cagactgtga acgccggact cgcggatcac cgccacggaa ccaaacatcg cggcgcgttt
     2221 accgctgtcg ttcacggcgt cgttcagtag ctggtaaccg cgcgggctgt cagccagcag
     2281 agcaatcacg ctgcgctgat cattaaacgg c
//
LOCUS       DAGWFR010000327         2294 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.330, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000327 DAGWFR010000000
VERSION     DAGWFR010000327.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2294)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2294)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2294
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.330"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..1149)
                     /locus_tag="MOX77_004656"
     CDS             complement(<1..1149)
                     /locus_tag="MOX77_004656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HCA3360022.1"
                     /translation="MFEEKLGQQYLAALHQAFPGVVMDEAWQTKDQLTITVKVNYLPE
                     VVEFLYYQQGGWLSVLFGNDERQLCGHYAVYYVLSMEQGTKCWITVRVEVDANKLEFP
                     SVTPRVPAAVWGEREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKDSMDYRQRPA
                     PTTDAETYEFINELGDKKNNVVPIGPLHVTSDEPGHFRLFVDGENIIDADYRLFYVHR
                     GMEKLAETRMGYNEVTFLSDRVCGICGFAHSTAYTTSVENAMGIQVPERAQMIRAILL
                     EVERLHSHLLNLGLACHFTGFDSGFMQFFRVRETSMKMAEILTGARKTYGLNLIGGIR
                     RDLLKEDMIQTRQLAQQMRRDVQELVDMLLSTPNMEQRTVGIGRLDPEI"
     gene            complement(1167..2090)
                     /locus_tag="MOX77_004657"
     CDS             complement(1167..2090)
                     /locus_tag="MOX77_004657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="respiratory chain complex I subunit 1 family
                     protein"
                     /protein_id="HCA3360023.1"
                     /translation="MSVFYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYR
                     DIIKLLGRQSIAPADSGWVFRLTPFVMVGVMLTIATALPVVTVGSPLPQLGDLITLIY
                     LFAIARFFFSIAGLDTGSPFTAIGASREAMLGVLVEPILLLGLWVAAQVAGSTHISNI
                     ADTIYHWPVARSIPLILALCACAFATFIEMGKLPFDLAEAEQELQEGPLTEYSGSGFA
                     VLKWGISLKQLVVLQMFVGVFLPWGQMETFSAGGLLLALVIAVVKLIVGVLVIALFEN
                     SMARLRFCATSRVTWAGFGFAFLAFVSLLAA"
     gene            complement(2093..>2294)
                     /locus_tag="MOX77_004658"
     CDS             complement(2093..>2294)
                     /locus_tag="MOX77_004658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461772.2"
                     /note="catalyzes the oxidation of formate to carbon
                     dioxide and molecular hydrogen; formate hydrogenlyase
                     comprises of a formate dehydrogenase, unidentified
                     electron carriers and a hydrogenase (subunit 3); Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="formate hydrogenlyase subunit 3"
                     /protein_id="HCA3360024.1"
                     /translation="QSMVITAHGFAMPVKEAFAPVLKLRKWLNPVSLVPGWQNAAAAG
                     LFRRLALIELAVLVVIVVSRGA"
BASE COUNT          548 a          718 c          608 g          420 t
ORIGIN      
        1 aatttccggg tccagacggc cgatacccac ggtacgctgt tccatattcg gcgtgctcag
       61 cagcatgtcc accagctcct gcacgtcacg acgcatctgc tgcgccagtt gacgggtctg
      121 gatcatgtcc tctttgagca gatcgcggcg aatcccgccg atcaggttca gaccgtaagt
      181 tttgcgcgcc ccggtcagta tttccgccat cttcatggag gtttcacgca cgcggaagaa
      241 ctgcataaag ccggagtcaa agccggtaaa gtggcaggcg aggcctaggt tcagcaggtg
      301 cgagtgcaga cgctccactt ccagcagaat ggcgcggatc atctgcgcac gctccggcac
      361 ctgaatgccc atcgcgtttt ccacggaagt ggtgtaggca gtgctgtgcg cgaaaccgca
      421 gattccacac acgcgatccg acaggaaggt gacttcgtta taacccatgc gggtttccgc
      481 cagtttttcc ataccacggt ggacgtagaa caggcggtag tcggcatcga taatgttttc
      541 gccatcgacg aacagacgga agtggcccgg ttcatcggaa gtgacatgca gcgggccaat
      601 cggcaccacg ttatttttct tgtcacccag ctcgttaatg aactcgtagg tttccgcatc
      661 ggtggtcggc gccgggcgct gacgataatc catgctgtct ttacgcagcg gatagagttc
      721 atccggccag tcgtccggca gcaccagacg gcgctcgtcc ggcagaccga ccgggattaa
      781 accgtacatg tcgcgtactt cgcgctcacc ccacacggca gccggcacgc gcggcgtaac
      841 ggatgggaat tccagcttat tggcatccac ttcaacacgg acggtaatcc agcacttggt
      901 gccctgctcc atcgacagca cgtaataaac ggcatagtgg ccgcacaact ggcgttcgtc
      961 attaccgaac agcaccgaca gccacccacc ctgctggtag taaagaaact ccaccacttc
     1021 cggcagatag ttcactttta ccgtaatagt cagctgatct ttggtctgcc aggcttcgtc
     1081 catcacgacg cccggaaacg cctggtgcag cgccgcaagg tattgttgac ctaatttttc
     1141 ttcaaacatg ctcaaactct cttaaatcac gccgccagca aggagacgaa ggctaaaaac
     1201 gcaaacccaa aaccggccca ggtcacgcgt gaagtggcgc aaaaacgcag tcgcgccatg
     1261 ctgttttcaa acagggcgat caccagtacg ccgacaatca gcttgacgac ggcaatcacc
     1321 agcgccagta acagtccgcc tgcgctgaag gtttccatct gtccccacgg caaaaacacg
     1381 ccgacgaaca tttgcagcac caccagttgt ttcaggctga tgccccattt cagcaccgca
     1441 aagccgctac cgctgtattc ggtcaacggc ccttcctgca actcctgctc cgcttccgcc
     1501 aggtcgaacg gcagcttgcc catttcgata aaggtggcaa aggcgcaggc gcacagcgcc
     1561 agaatcagcg gaatactgcg cgcgacaggc cagtgataaa tggtatcggc gatattgctg
     1621 atatgagttg aacccgccac ctgcgcggct acccacagac ccagcagcag aatcggctcc
     1681 accagcacgc cgagcatcgc ttcacggctg gcgccgatcg cagtgaacgg actgccggta
     1741 tccaggcctg caatagagaa gaagaagcgc gcaatcgcga acagataaat cagggtgatt
     1801 aaatcaccca gttgcggcaa cggagatcca acggtgacga ccggcagcgc ggtggcgata
     1861 gtcagcatca cgccgaccat cacaaacggc gtcaggcgaa aaacccagcc ggaatcagcg
     1921 ggcgcaatac tctgacgacc gagcagtttg ataatgtcgc ggtactcctg caacacgccc
     1981 ggcccacggc gattgtgtag acgggcgcgc gccacgcgag taataccgga cagcaatggc
     2041 gcaacggcaa atagcaccag cgcctgaatt aacggataaa acacactcat tttcaggctc
     2101 ctcgtgaaac cacaatcacc accagcaccg ccagctcaat cagcgccaga cgacggaaca
     2161 gccccgcggc cgccgcgttc tgccagcccg gcaccagcga taccgggttc agccatttac
     2221 gcagtttgag taccggggca aaggcctctt tcaccggcat ggcgaaaccg tgcgcggtaa
     2281 tcaccatcga ctgc
//
LOCUS       DAGWFR010000328         2294 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.331, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000328 DAGWFR010000000
VERSION     DAGWFR010000328.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2294)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2294)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2294
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.331"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..349)
                     /locus_tag="MOX77_004659"
     CDS             complement(<1..349)
                     /locus_tag="MOX77_004659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010835207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
                     /protein_id="HCA3360025.1"
                     /translation="MKKKVMSVFFQLAWAALLVISLLYPRSGAPVLVGASVQVSCFLA
                     WLLAALCAVGWFAGDRARDEVRAALIKFRAHPVKPVRTWAIRLLIVLCLAFSGWVITL
                     VFYLLTLVLYQIAR"
     gene            complement(354..863)
                     /locus_tag="MOX77_004660"
     CDS             complement(354..863)
                     /locus_tag="MOX77_004660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001069913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme"
                     /protein_id="HCA3360026.1"
                     /translation="MNTSIVKCCLVGAVLAIAATLPGFQSLHTSVEGLKLIADYEGCR
                     LQPYQCSAGVWTDGIGNTSGVVPGKTITERQAAQGLITNVLRVERALEKCVVQPMPQK
                     VYDAVVSFAFNVGTGNACSSTLVKLLNQRRWADACHQLPRWVYVKGVFNQGLDNRRAR
                     EMAWCLKGA"
     gene            complement(844..1059)
                     /locus_tag="MOX77_004661"
     CDS             complement(844..1059)
                     /locus_tag="MOX77_004661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3360027.1"
                     /translation="MTLERISAFITYCIAVLLAWLGDLSLKDASTVGGVLIGVLMLAI
                     NWYYKHQSFKLLRGGKISRGEYEYFNR"
     gene            complement(1063..1266)
                     /locus_tag="MOX77_004662"
     CDS             complement(1063..1266)
                     /locus_tag="MOX77_004662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail protein X"
                     /protein_id="HCA3360028.1"
                     /translation="MKVRAHQYDTVDALCWRHYGRTQGVTEQVLQANPGLAEYGPFLP
                     HGLQVELPDITASTTAQTVQLWD"
     gene            complement(1266..1730)
                     /locus_tag="MOX77_004663"
     CDS             complement(1266..1730)
                     /locus_tag="MOX77_004663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head completion/stabilization protein"
                     /protein_id="HCA3360029.1"
                     /translation="MKFVAPEQAPEQAEVIKNTPFWPDVNLSEFRSVMRTDGTVTQPR
                     LKQVVLTAISEVNAELYDFRNRQQMLGWRTLAEVPAEMLDGKSERIRHYHNAVFCWAR
                     AVLNERYQDYDATASGVKRGEELAEASGDLWRDARWAISRVQDAPHCTVELI"
     gene            complement(1824..>2294)
                     /locus_tag="MOX77_004664"
     CDS             complement(1824..>2294)
                     /locus_tag="MOX77_004664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3360030.1"
                     /translation="LLPKYSAWAEGVLAAGGAQQDDVLMYVMLWRIDAGDYAGALEIG
                     RHALRHGWVMPLGNRNVQTVLAEEMADAAQSALLAAAGFDADPLLQTLDLTTDLDMPD
                     QSRARLHKAIGAVLSESNPASALNHLNHALQLDPRCGVKKEKQQLERRLRNDSR"
BASE COUNT          491 a          752 c          608 g          443 t
ORIGIN      
        1 agcgggcaat ctgatacaaa accagcgtca gcaggtaaaa caccagggtg atcacccatc
       61 ccgaaaacgc caggcacaga acaataagca gcctgatagc ccatgtacgc acgggtttta
      121 cggggtgcgc cctgaatttg attaatgccg ccctgacctc atcgcgcgcc cgatctccgg
      181 cgaaccaccc gacagcgcac agcgcagcaa gcagccaggc gaggaagcat gacacctgga
      241 cagacgcacc aaccagaacc ggcgcaccgc tgcgcggata cagcaggctg attaccaaca
      301 gcgcagccca tgccagctgg aaaaaaacgc tcatgacttt ctttttcatt ccgttaggct
      361 ccttttaagc accaggccat ttcccgcgcg cggcggttgt ccagcccctg attaaacaca
      421 cctttgacat atacccagcg cggcagctga tggcaggcat ccgcccagcg ccgctggttc
      481 agcaacttaa ccagcgtgga gctgcaggcg ttgccggtgc ccacgttgaa agcaaacgac
      541 accaccgcgt catagacctt ttgcggcatc ggctgcacca cacatttttc cagcgcccgc
      601 tccacgcgca gcacattggt gataagtccc tgcgccgcct gccgttccgt gatggttttt
      661 ccaggcacca caccggacgt attgccgatc ccgtcagtcc agacgcccgc gctacactga
      721 taaggctgca ggcggcatcc ctcgtaatcg gcgatcagtt tcagcccctc aacggaggta
      781 tgaagcgact gaaatccggg cagcgtggct gcgatagcca gcactgcccc gacaaggcag
      841 cacttaacga ttgaagtatt catattcccc ccgcgaaatc ttgccgccac gtaacaattt
      901 gaaagactgg tgtttgtagt accagttgat agccagcatc agcacaccaa tcagtacgcc
      961 gccaaccgtt gacgcatcct tgagcgacag atcgcccagc catgccagca gcacggcaat
     1021 gcagtaagtg ataaaggcgc tgattcgttc aagcgtcata attcagtccc atagctggac
     1081 ggtctgcgcc gtggttgacg ccgtaatgtc cggcagctcc acctgcagcc cgtgcggtaa
     1141 aaatgggccg tactcagcca gccccggatt tgcctgcaga acctgctcag tgacaccctg
     1201 cgtgcgcccg taatgacgcc agcaaagcgc gtccaccgtg tcatactgat gcgcacgcac
     1261 tttcatcaga taagctccac cgtacagtgc ggtgcatcct gcacccggct gatggcccag
     1321 cgggcatcac gccacagatc gccgctggcc tccgccagct cctcccctcg cttcacgcct
     1381 gacgccgtgg cgtcatagtc ctgataacgc tcattaagca cagcgcgcgc ccagcaaaaa
     1441 acagcgttgt ggtagtgccg gatacgctcg cttttaccgt ccagcatttc tgcgggaacc
     1501 tcagcaagtg tccgccagcc cagcatctgc tgacggttgc ggaagtcgta cagctcagcg
     1561 ttaacctcag agatcgccgt cagcacgacc tgctttaaac gcggctgcgt caccgtgccg
     1621 tcagtgcgca tcacactgcg aaattccgac aggttcacat caggccagaa cggcgtattt
     1681 ttgatgacct ccgcctgttc cggtgcctgt tctggcgcaa caaacttcat gcggcgttct
     1741 cctgaataag tgggcggtgg acggaatttt gatgtggcag tgcctttcgc catcccgtgc
     1801 cgcccgtgcg cggggcacgt tcgttagcgg ctgtcattgc gcagtctgcg ctccagctgc
     1861 tgcttttctt ttttcacacc gcagcgggga tcaagctgca gcgcatggtt aaggtgattc
     1921 agggcagacg ccgggttgct ttcgctcagt acagcaccga tggctttatg caggcgcgcc
     1981 cgcgactggt ccggcatatc cagatcggtg gtcaggtcca gcgtctgcag aagcggatcg
     2041 gcatcaaaac cggcagcggc aagcagagcg ctttgcgccg cgtctgccat ttcttctgcc
     2101 agcacggtct gcacgttacg gttgcccaga ggcatcaccc agccatggcg cagcgcatgg
     2161 cgcccgattt cgagcgcacc ggcataatca ccggcgtcga tacgccacag catcacgtac
     2221 atcagcacgt catcctgctg cgcacctccg gcagccagca cgccctccgc ccaggcggaa
     2281 tatttcggca gcag
//
LOCUS       DAGWFR010000329         2270 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.332, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000329 DAGWFR010000000
VERSION     DAGWFR010000329.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2270)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2270)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2270
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.332"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..>2270
                     /locus_tag="MOX77_004665"
     CDS             <1..>2270
                     /locus_tag="MOX77_004665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3360031.1"
                     /translation="AGRKLVVWPQPDDETTVPALWLYTHTGVPNNAAIPLLSPKVTVN
                     IAQAVGNPVSVSGDHVDASFKASKVKVGESITLTVTTRGCDGKLVKNAPFVIRREDAK
                     NRQGVVNNTNPVHVGDAELTTVQTEYRGVTDAEGKATVVVTQDEGPGVKTHLIVASQS
                     YPTLTDGVDVIFTTITSPDTAQANMYGHMLESASATLNGATYTFTRPKLAVEAGNADE
                     SVNDTNETWAQFTWSGADNHCDVLPDAEQLVALRHAHSTLATYTGWPASGDAEYWSST
                     KDQMNNYHAAVHMNSASVVRAPNSDTLLVSCVDKAQPAAHPQITLSPEGPYKAQVGES
                     IDLVMTVVDKDTQKPLPYRYMELFIDPAKNRKGEHQDAWDNQRVTVSSEDMRASSPEH
                     YTGVTDVNGQAHLTLQHDSGMGGETPIRIVMPDDEGGNVELPFSVIFTVITSPDVDGA
                     NMWGHMRGVVDAGNLYKRPLLAVEASHKDGQFSENNEEWATFNSVASATAQCGVGQVP
                     DQSSLAHLYSEHPSGKMEIEHGWPTEDYFIAADSDASGTVHVNLANGDSNKFTNQPNY
                     LTCSANEMVAVLDVYFNDDPTTKNADMTAKVGEQIKLNIHSRNALNDMAIAYTDFTIT
                     MANGKRRDGLTTGFTDPSNGEMQFDGVGYLAGQVYHGITDANGDATIILTQNKGVGLL
                     TPLSIAPVDSLIKTPISRSVKFTVATSPDTVKAKMWGHMADTLTVGDWTFERPKLASE
                     VNSPLRTQEESNETWT"
BASE COUNT          554 a          664 c          662 g          390 t
ORIGIN      
        1 ggccggacgg aaactggttg tctggccgca gccagacgat gaaacgaccg tccccgcgct
       61 gtggctctat actcacaccg gcgtgccgaa taatgcggcc atcccgctgc tcagcccgaa
      121 agtgactgtc aatattgccc aggcagtagg caatcccgtg tcggtcagcg gcgatcatgt
      181 tgatgccagc tttaaagcct caaaagtgaa agtaggagag agcatcaccc tcaccgtcac
      241 gaccagaggg tgtgatggca aactggtgaa aaatgcgccg tttgtcatcc gccgtgagga
      301 tgccaaaaac cgtcagggtg tggtcaataa cactaacccg gtgcacgttg gcgatgccga
      361 gctaacgacc gtgcaaacgg agtatcgcgg cgtcaccgat gccgagggta aagccactgt
      421 ggtggtgacg caggatgaag gccccggcgt aaaaacgcat cttatcgtcg cttcgcaaag
      481 ttatcctacg ctgacggacg gcgtggacgt tattttcacc accatcacca gccccgacac
      541 cgcccaggcc aacatgtacg gccacatgct ggagagcgcc agcgccacgc tgaacggcgc
      601 gacctacact ttcactcgac cgaagctggc ggtggaggcg ggtaacgctg acgaaagcgt
      661 caacgatact aacgaaacct gggcgcagtt tacctggagc ggcgcggata accattgcga
      721 cgttctgccg gacgccgaac aactggtggc gctaagacat gcgcatagta cgctggcaac
      781 gtacaccggc tggccggcgt cgggcgatgc ggaatactgg tcgtcaacca aagatcagat
      841 gaacaactac cacgctgccg tgcatatgaa cagcgcgtcg gtcgtcagag cgcccaacag
      901 cgatacgctg ctggttagct gtgtggataa agcccagcct gcggcgcacc cgcagattac
      961 cctctctccg gaggggcctt ataaggcgca ggtgggggaa tcgattgatc tggtcatgac
     1021 ggtagtcgat aaagacacgc aaaaaccgct gccttaccgt tacatggagc tgtttatcga
     1081 cccggcgaaa aaccgcaaag gggagcatca ggacgcgtgg gataaccagc gggttaccgt
     1141 cagctccgaa gatatgcgcg cctcttcgcc ggaacactat accggcgtga ccgacgtcaa
     1201 cggtcaggcg cacctgacgc tacagcacga cagcggcatg gggggcgaga cgcccatccg
     1261 catcgtgatg ccggacgatg aaggcggcaa cgtcgagctg ccctttagcg tcattttcac
     1321 cgtaataacc agcccggatg tggacggcgc caacatgtgg ggccatatgc gcggcgtggt
     1381 ggatgccggc aacctgtata aacgcccgct gctggcggtg gaagccagcc ataaagacgg
     1441 tcagttcagc gaaaacaacg aagagtgggc gacgtttaac tccgtggcgt cggccaccgc
     1501 gcagtgcggc gtcggccagg tgccggatca gtcatcgctg gcgcatttat acagcgagca
     1561 ccccagcggc aagatggaaa tcgaacacgg ctggccgacc gaagactact tcatcgccgc
     1621 ggatagcgac gcctcgggaa cggtacacgt caacctggca aacggcgaca gcaacaaatt
     1681 taccaatcag ccgaactacc tgacctgctc ggccaatgaa atggtggcgg tgctggacgt
     1741 ctacttcaac gacgacccaa cgactaaaaa tgctgatatg accgccaaag tcggcgaaca
     1801 gattaagctg aatattcatt cgcgcaacgc ccttaacgac atggcgattg cctataccga
     1861 cttcaccatc accatggcga acggcaagcg gcgcgacgga ttgacgaccg gctttaccga
     1921 tcccagcaac ggcgagatgc agtttgacgg cgtgggctac cttgccgggc aggtttatca
     1981 cgggatcacc gacgccaacg gcgatgcgac cattatcctc acccagaata agggcgtggg
     2041 gctactgacg ccgttaagca tcgcgcccgt cgattcatta atcaagacgc cgatttcccg
     2101 cagcgtcaag tttaccgtcg ccaccagccc ggacacggta aaagccaaaa tgtggggcca
     2161 catggccgac actcttaccg tcggcgactg gacttttgag cggcctaagc ttgcgagtga
     2221 agtaaatagc ccgctgcgta ctcaggaaga gagcaatgaa acctggacgc
//
LOCUS       DAGWFR010000330         2256 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.333, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000330 DAGWFR010000000
VERSION     DAGWFR010000330.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2256)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2256)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2256
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.333"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..253
                     /locus_tag="MOX77_004666"
     CDS             <1..253
                     /locus_tag="MOX77_004666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001273074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="peptidase"
                     /protein_id="HCA3360032.1"
                     /translation="PVEFAEGESRTPLATAFRSLLSDGEPVMNFAEQATKDRVGDAVK
                     VDVAEFAEADPERLALHQKAVALSKKEGISYEAAVARCL"
     gene            268..1221
                     /locus_tag="MOX77_004667"
     CDS             268..1221
                     /locus_tag="MOX77_004667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015365646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3360033.1"
                     /translation="MSDYLKGKRVVDPVLTSIARGYKNAAFIGERIFPVVLTDKEGVR
                     VPTFGKTAFVEYDTERAVGADSNVLVREKTGTLDLVLGEHDLAAPVDYREQAESMFNE
                     ESKAIRRATNGVNLRRELIAARLAQDEKVYRTGHVKKLTAGDRWAGGKGDPIGVIEAG
                     MEAVRTATGLRPNLMTMGAGVMALLKFHPAIQAAIGANERKRITTEILQDLFQIEEIV
                     IGAPVSLPSMKAAMDKDSVPTDIWGDNLMLHYVGKPQPGADSADENEPSFGYTLRRKG
                     MPVADKYDGAGGKVKYCRYTDIYKVAVVGGDAGYLITGISK"
     gene            1231..1569
                     /locus_tag="MOX77_004668"
     CDS             1231..1569
                     /locus_tag="MOX77_004668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016191685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2190 family protein"
                     /protein_id="HCA3360034.1"
                     /translation="MGTTQQVILITTVTAGAALAQQRFVGADNTPCKAGAAALGVAEV
                     DAVTGDSTPVSVLGIIAVEAGAAVSRGVAVQSDAQARAVPQSGDGKSCGIALDEAGGE
                     GDVIRILRGV"
     gene            1571..2017
                     /locus_tag="MOX77_004669"
     CDS             1571..2017
                     /locus_tag="MOX77_004669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000271671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1320 domain-containing protein"
                     /protein_id="HCA3360035.1"
                     /translation="MYCTLEDLLAQVPERTLIELTSEEMDFDSPATVNTRVVDSCIRY
                     ADELIDAHLRGRYILPLAEIPTVLRDIAITLVRYRLYARRPEGDLPDTVKDDHKEALR
                     QLRELRDNRLTLGLPSTQKDVPEPGEFRVRSRPATFGGRDGLLEKY"
     gene            2017..>2256
                     /locus_tag="MOX77_004670"
     CDS             2017..>2256
                     /locus_tag="MOX77_004670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016191683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3360036.1"
                     /translation="MNVLPVLDAVLARLREKLPQLQVEYFPEKPAEYRLNHPVGALLL
                     SYAGSRFDRPDDTGAVIQSQTIQLCVTVVFRQLNGK"
BASE COUNT          471 a          616 c          723 g          446 t
ORIGIN      
        1 gccggtggag tttgctgagg gggaaagccg cacaccgctg gccaccgcct tccgttcatt
       61 gctctccgac ggggagccgg tgatgaactt cgccgaacag gccacaaagg atcgtgtcgg
      121 cgacgcggtg aaggtggatg tggcggagtt tgcggaagcc gatcctgagc gtctggccct
      181 gcatcagaaa gcagtggccc tgtccaaaaa agaaggcatc agctatgagg ctgctgtcgc
      241 acgctgcctg taatttaagg agagagcatg tctgattact taaaaggtaa acgtgtcgtt
      301 gatccggtac tgaccagtat cgcccgaggc tataaaaatg ccgcattcat tggcgaacgt
      361 attttccccg tcgtgctgac ggacaaggaa ggcgtgcgtg tgccgacctt cgggaaaacc
      421 gcctttgtgg aatatgacac cgagcgtgcc gtcggggcgg acagcaatgt tctggtccgt
      481 gagaaaaccg gcacgcttga tctggtgctg ggtgagcacg atctggctgc gccagtggac
      541 tatcgcgaac aggcggagtc catgtttaac gaggagagca aggccatccg tcgcgccacg
      601 aatggcgtga atctgcgccg tgaacttatc gccgcccgtc tggctcagga tgaaaaggtc
      661 taccgtaccg ggcacgttaa aaaactgaca gccggcgacc gctgggccgg tggtaagggg
      721 gaccccatcg gggtaattga agccggtatg gaagcggtcc gtacggccac ggggctgcgt
      781 cctaacctga tgaccatggg ggccggcgtg atggcgctgc tgaagttcca cccggcaatt
      841 caggcagcca tcggagccaa cgaacgcaag cgcatcacca cggagatcct gcaggacctc
      901 tttcagatcg aagagatcgt catcggtgct cctgtctccc tgccgtccat gaaagcggca
      961 atggataagg acagcgtgcc gacggatatc tggggagaca atctgatgct gcattacgtc
     1021 ggcaagccgc agccgggggc ggacagcgcg gacgagaacg agccgtcctt cggctacacc
     1081 ctgcgccgta aggggatgcc tgttgccgac aagtacgacg gagccggcgg caaggtgaag
     1141 tactgccgtt ataccgatat ctacaaagtc gccgtggttg gtggcgatgc cgggtatctc
     1201 attaccggta tcagtaaata aggaggcgtt atgggaacca ctcagcaggt cattctgatc
     1261 acaaccgtaa cggcaggggc cgcactggca cagcagcgtt ttgtcggggc agataatacc
     1321 ccctgtaaag ccggtgccgc agcgctcggg gttgccgaag tggatgctgt taccggcgac
     1381 agcacgccgg tgagcgttct gggcattatt gctgtcgagg ccggggccgc tgtcagccgt
     1441 ggtgtggctg ttcagtcaga tgctcaggcc agagccgtgc cgcagtccgg cgacggtaaa
     1501 tcctgtggta ttgcacttga tgaagccggg ggtgaaggcg acgtcattcg tatcctgcgc
     1561 ggggtgtgac atgtactgca ccctggagga tttgcttgcg caggtgccgg aacgaacgct
     1621 gatcgagctc accagtgaag agatggactt cgactcgcct gcaacagtga atacccgtgt
     1681 ggtggacagc tgtatccgct atgccgacga gctgattgat gcccatctgc gcggacgcta
     1741 tatcctgcca ctggcagaga taccgactgt tctgcgggac attgccatca cgctagtccg
     1801 ttaccggctc tacgcccgcc gcccggaagg tgacctcccg gatacggtga aggatgacca
     1861 caaagaagcg ctgcggcaac tcagggagtt acgtgataac aggctcacgc tggggctgcc
     1921 gtccactcag aaagatgtgc ctgagcctgg cgagtttcgt gtacgcagcc gcccggccac
     1981 tttcggcggt cgtgacggtt tactggagaa atactgatga acgttctgcc cgtccttgat
     2041 gcggtactgg cccggttacg cgagaagctg ccgcaactgc aggtggagta cttcccggag
     2101 aaaccggctg aatatcgcct gaaccatccg gttggcgcgt tgctgctgag ctatgccggt
     2161 tcgcgctttg acaggccgga tgataccggt gcggtgatcc agtctcagac tatccagctc
     2221 tgcgtcacgg tggtcttccg ccagctcaac ggtaaa
//
LOCUS       DAGWFR010000331         2204 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.334, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000331 DAGWFR010000000
VERSION     DAGWFR010000331.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2204)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2204)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2204
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.334"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..406
                     /locus_tag="MOX77_004671"
     CDS             <1..406
                     /locus_tag="MOX77_004671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010426221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HCA3360037.1"
                     /translation="ALTFVALPHYVRLTRAAVLVEVNRDYVTASRVAGAGAMRQMFVN
                     IFPNCLAPLIVQASLGFSNAILDMAALGFLGMGAQPPTPEWGTMLSDVLQFAQSAWWV
                     VTFPGLAILLTVLAFNLMGDGLRDALDPKLKQ"
     gene            417..1400
                     /gene="dppD"
                     /locus_tag="MOX77_004672"
     CDS             417..1400
                     /gene="dppD"
                     /locus_tag="MOX77_004672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter ATP-binding protein"
                     /protein_id="HCA3360038.1"
                     /translation="MALLNVDQLSVHFGDEGTPFKAVDRISYSVKQGEVVGIVGESGS
                     GKSVSSLAIMGLIDYPGRVMAENLLFNGQDLKRISEKERRNLVGAEVAMIFQDPMTSL
                     NPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
                     RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVA
                     EAAHKIIVMYAGQVVETGAAQDIFRAPRHPYTQALLRALPEFAQDKARLASLPGVVPG
                     KYDRPTGCLLNPRCPHATDRCRAEEPALNQLDDGRQSKCHYPLDDAGRPTL"
     gene            1397..>2204
                     /locus_tag="MOX77_004673"
     CDS             1397..>2204
                     /locus_tag="MOX77_004673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter ATP-binding protein"
                     /protein_id="HCA3360039.1"
                     /translation="MSTHEATLQQPLLRAIDLKKHYPVKKGIFSPERLVKALDGVSFN
                     LERGKTLAVVGESGCGKSTLGRLLTMVETPTGGELYYQGQDLLKHDPHAQKLRRQKIQ
                     IVFQNPYGSLNPRKKVGQILEEPLLINTSLSKEQRREKALAMMAKVGLKTEHYDRYPH
                     MFSGGQRQRIAIARGLMLDPDVVIADEPVSALDVSVRAQVLNLMMDLQQDMGLSYVFI
                     SHDLSVVEHIADEVMVMYLGRCVEKGTKEQIFNNPRHPYTQALLSATPRLN"
BASE COUNT          470 a          591 c          662 g          481 t
ORIGIN      
        1 ggcgttgacg tttgtggcgc tgccgcacta tgtccgctta acccgcgcgg cggttctggt
       61 agaggtgaac cgcgattatg tgactgcctc ccgcgtggcg ggcgcaggcg cgatgcgtca
      121 gatgttcgtc aatattttcc cgaactgcct tgcgccgctg atcgttcagg catcgctcgg
      181 tttctctaac gccattctcg atatggccgc cctcggcttt cttggcatgg gcgcgcagcc
      241 gcctacgccg gaatggggca ccatgctctc tgatgtattg cagttcgcgc aaagcgcctg
      301 gtgggtcgtg accttcccgg ggctggcgat tctgctgacg gtactggcat ttaacctgat
      361 gggtgacggt ctgcgtgacg cgctcgatcc caaactgaag cagtaagagg ttcgagatgg
      421 cgttattaaa tgtagatcaa ttatcggtgc acttcggcga cgaagggaca ccgttcaaag
      481 ccgtcgaccg cattagctac agcgtgaagc agggtgaggt ggtcggtatt gtcggcgagt
      541 ctggttccgg caaatccgtc agctcgctgg cgattatggg gcttatcgat tacccaggcc
      601 gcgtgatggc ggaaaacctg ctctttaacg gacaggatct gaagcgcatt tccgagaagg
      661 aacgtcgcaa cctggtgggc gctgaagtgg cgatgatttt ccaggacccg atgaccagcc
      721 tcaatccttg ctataccgtt ggctttcaga ttatggaagc catcaaggta catcagggcg
      781 ggaacaagaa aacccgtcgt cagcgagcga ttgacctgtt gaaccaggtg ggtattcccg
      841 atccggcttc tcgtctggat gtctatccgc accagctttc tggcggcatg agtcagcgcg
      901 tgatgattgc gatggccata gcctgtcgac caaagctgtt aattgctgat gaaccgacca
      961 cggcgctgga tgtgaccatt caggcgcaaa tcattgagct gctgctggag ttgcagcaaa
     1021 aagagaacat ggcgctggtg ctgattaccc atgacttggc gctggtggcg gaagcggcgc
     1081 acaaaattat cgtcatgtac gccgggcagg tcgtcgaaac cggcgctgcg caggatattt
     1141 tccgcgcgcc gcgtcatccg tatacccagg cattgctacg tgcgttacca gagtttgcgc
     1201 aagataaagc gcgtctggcg tcgctgccgg gcgtggtgcc ggggaaatat gaccgaccga
     1261 cgggttgtct gcttaaccct cgctgccccc acgccacgga cagatgtcgt gcggaagaac
     1321 ctgctctcaa ccaactggac gatggacgtc agtcaaaatg tcattaccca ctcgatgatg
     1381 ccgggaggcc cacactatga gtacgcatga ggccaccttg caacagccgc tgttgcgggc
     1441 tatcgacctg aaaaaacact atccggtgaa gaaggggatc ttttctccgg aacggctggt
     1501 aaaagcgctg gacggcgtgt cgtttaatct cgaacgcggt aaaacgctgg cggtagtggg
     1561 ggagtccggt tgtggaaaat ccacactggg tcgcctgctg acgatggttg aaacgccaac
     1621 cggcggcgag ctttattacc aggggcagga tctgctcaaa cacgatccgc acgcgcagaa
     1681 actgcggcgg cagaaaattc agattgtgtt tcagaacccc tacggttccc tgaacccacg
     1741 caagaaagtg gggcaaattc tggaagaacc gttgctgatt aacacctcgc tcagcaaaga
     1801 gcagcgccgt gaaaaagcgc tggcgatgat ggcgaaggtg gggctgaaaa ccgagcacta
     1861 cgaccgctat ccgcatatgt tctccggcgg ccagcgtcag cgtatcgcta tcgcccgcgg
     1921 tctgatgctt gatccggacg tagtgattgc cgacgaaccg gtctccgcgc tcgacgtgtc
     1981 ggtgcgcgct caggtgctga acctgatgat ggatttgcaa caggatatgg ggctgtctta
     2041 tgtctttatc tcgcacgacc tgtcggtggt ggagcacatt gccgatgaag taatggtcat
     2101 gtacttaggc cgctgcgtgg agaaagggac caaagagcag atttttaaca atccacgtca
     2161 tccctatacc caagcgttgc tctccgccac gccgcggctg aatc
//
LOCUS       DAGWFR010000332         2203 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.335, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000332 DAGWFR010000000
VERSION     DAGWFR010000332.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2203)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2203)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2203
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.335"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(57..614)
                     /locus_tag="MOX77_004674"
     CDS             complement(57..614)
                     /locus_tag="MOX77_004674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DcrB family lipoprotein"
                     /protein_id="HCA3360040.1"
                     /translation="MRNLVKYAGIGLLVMGLAACDNNDTKASAESAAAESQASGQPIS
                     LMDGKLSFSLPADMTDQSGKLGTQANNMHVYSDPTGQKAVIVIVGDNTDEALPVLANR
                     LLEQQRSRDPQLQVVTNKSIELKGHTLQQLDSIISAKGQTAYSSIVLGKVDNQLLTIQ
                     VTLPADNQQKAQTTAENIINTLVIK"
     gene            complement(687..1352)
                     /locus_tag="MOX77_004675"
     CDS             complement(687..1352)
                     /locus_tag="MOX77_004675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine/7-aminomethyl-7-
                     deazaguanine transporter"
                     /protein_id="HCA3360041.1"
                     /translation="MTPFTQSQRIKALFWLSLFHLLVIISSNYLVQLPITIFGFHTTW
                     GAFSFPFIFLATDLTVRIFGAPLARRIIFAVMIPALLVSYVVSSLFYMGAWQGFAALA
                     NFNLFVARIAAASFMAYALGQILDVHVFNRLRQNRRWWLAPTASTLFGNISDTLAFFF
                     IAFWRSPDAFMAGHWMEIALVDYCFKVLISIIFFLPMYGVLLNMLLKKLADKSEISPL
                     PAS"
     gene            1522..1767
                     /gene="tusA"
                     /locus_tag="MOX77_004676"
     CDS             1522..1767
                     /gene="tusA"
                     /locus_tag="MOX77_004676"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA"
                     /protein_id="HCA3360042.1"
                     /translation="MSDLFSSPDHTLDALGLRCPEPVMMVRKTVRNMQTGETLLIIAD
                     DPATTRDIPGFCTFMEHDLLAQETEGLPYRYLLRKAH"
     gene            complement(1791..>2203)
                     /locus_tag="MOX77_004677"
     CDS             complement(1791..>2203)
                     /locus_tag="MOX77_004677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HCA3360043.1"
                     /translation="AAKEIKVLIENSVSRIDTGSTQVREAGETMKEIVNAVTRVTDIM
                     GEIASASDEQSKGIEQVAQAVSEMDSVTQQNASLVEESAAAAAALEDQANELRQAVAA
                     FRIQKQPRREASPTPLSKGLTPQPAAEQANWESF"
BASE COUNT          521 a          580 c          582 g          520 t
ORIGIN      
        1 gcttaaaaaa acggcctccg tctgcactgc cggaggccgc atcatcgtcg tgaaggttac
       61 ttaataacca acgtattgat gatgttttca gctgtggttt gcgctttttg ctgattgtcc
      121 gcaggcagcg tgacctgaat cgtcagcaat tggttatcca ctttgcccag cacgatggaa
      181 gagtacgccg tctggccttt cgcggagata atgctgtcca gctgttgcaa cgtatggcct
      241 ttgagctcaa tagacttatt ggtgacgacc tgaagctgcg ggtcgcggct acgctgttgc
      301 tcaagcaggc ggttcgccag caccggcaac gcttcatcgg tattatcgcc gacgataaca
      361 atcaccgctt tctggcccgt cgggtcagaa taaacgtgca tattattcgc ctgggtgccc
      421 agcttaccgc tttgatcggt catatccgcc ggcagtgaga aactgagttt gccatccatc
      481 aggctgatgg gctgaccgga ggcctggctt tctgcggcgg cgctttctgc cgacgctttt
      541 gtatcgttgt tatcacaggc cgcaagcccc ataaccagca ggccaatacc ggcatattta
      601 accaaattgc gcattgactt cttcctttcg ataaacggcc ataacggctc attcgctcat
      661 cttatcacaa ctcggaaaac gaacctttaa cttgccggta atggggaaat ttcagattta
      721 tctgccagct ttttcagcaa catattcagt agaacgccgt acatcggcag gaagaaaata
      781 atgctgatga gcaccttaaa gcaataatcc accagcgcaa tttccatcca gtgcccggcc
      841 ataaaggcat cggggcttcg ccagaacgca atgaagaaaa aggcaagggt atcgctgata
      901 ttgccaaaca gcgttgaagc ggtcggcgcc agccaccagc gacgattttg gcgcaggcgg
      961 ttaaacacat ggacatcaag gatctgtccc agcgcgtagg ccataaagct ggcggcggcg
     1021 atacgggcga cgaacagatt aaagttcgcc aacgcggcga aaccttgcca ggcacccata
     1081 tagaacagcg atgacaccac atatgacacc agcagcgcag ggatcatgac ggcgaagata
     1141 atgcggcgcg ccagcggtgc gccaaaaata cgcacggtaa gatcggtggc gagaaaaata
     1201 aaaggaaaac taaacgcgcc ccaggtcgtg tggaaaccaa aaatagtgat ggggagctgc
     1261 accagatagt tactggaaat gatcaccagt aaatggaata gcgatagcca gaacaacgct
     1321 tttatgcgct gtgattgtgt aaacggagtc atattgtgac ctttttgttg gatggggtga
     1381 gggaacccaa taaagaaccg ccgcataata ctgttttgcg ctggcattgc aatggctaat
     1441 tttcacgcaa tcgttaacct gcttggctta ctgacgaaga tgggcgtaaa atatcgccgt
     1501 ttttctacca ttgagacgaa gatgagcgat ctgttttcct cccctgacca tacgcttgac
     1561 gccctggggc tgcgttgccc tgaaccggta atgatggtgc gcaaaacggt gcgcaacatg
     1621 caaactggcg aaacattgct gattatcgcc gacgatccgg cgacgacgcg tgatattccg
     1681 gggttctgta cctttatgga acacgatttg ctggcgcaag agacggaggg tctgccgtac
     1741 cgctatttat tgcgtaaagc gcattaaccg cacggcagat agcattctga ttagaagctt
     1801 tcccagttcg cctgttctgc ggcgggctgt ggcgttaagc ctttgcttaa cggcgtcggc
     1861 gacgcctccc gacgaggttg tttctggatg cggaacgcgg cgaccgcctg acgaagctcg
     1921 ttagcctgat cttccagcgc cgccgctgct gctgcggatt cctctaccag cgaggcgttt
     1981 tgctgcgtca cgctgtccat ttccgatacc gcctgcgcca cctgctcaat gcctttgctt
     2041 tgctcatcgg aggcagaggc gatttcgccc ataatatcgg tcacgcgggt cacggcgtta
     2101 acgatctctt tcatggtttc tcccgcttcg cgtacctgcg tagagccggt atcaatgcgc
     2161 gacacggagt tttcaatcag cactttgatc tctttggcgg cct
//
LOCUS       DAGWFR010000333         2189 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.336, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000333 DAGWFR010000000
VERSION     DAGWFR010000333.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2189)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2189)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2189
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.336"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..200)
                     /locus_tag="MOX77_004678"
     CDS             complement(<1..200)
                     /locus_tag="MOX77_004678"
                     /EC_number="3.2.2.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461069.1"
                     /note="inducible, catalyzes the hydrolysis of alkylated
                     DNA, releasing 3-methyladenine, 3-methylguanine,
                     7-methylguanine and 7-methyladenine; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase 2"
                     /protein_id="HCA3360044.1"
                     /translation="MFTLSWQPPYDWSWMLGFLAARAVDGVETVGEGFYARSLVVGEH
                     RGLVSVRPHLPTHTVQVSVSAG"
     gene            334..1686
                     /gene="yegD"
                     /locus_tag="MOX77_004679"
     CDS             334..1686
                     /gene="yegD"
                     /locus_tag="MOX77_004679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone"
                     /protein_id="HCA3360045.1"
                     /translation="MFIGFDYGTANCSVAIMRDGHPQLLTMENNSALLPSMLCAPTRE
                     AVSEWLYRHHDVPATDEETQALLRRAIRYNREEDIEVGAQSVQFGLASLAHYIDDPQE
                     VWFVKSPKSFLGASGLKPQQVALFEDLVCAMMVHILHTAHSQLPEAITQAVIGRPINF
                     QGLGGDDANRQAQGILERAAKRAGFQEVVFQYEPVAAGLDYEATLREEKRVLVVDIGG
                     GTTDCSMLLMGPQWRQRADRENSLLGHSGCRVGGNDLDIALAFKNLMPLLGMGGETEK
                     GIALPVLPWWNAVAINDVPAQSDFYSSANGRLLNDLVRNAREADKVALLLKVWRQRLS
                     YRLVRCAEESKIALSGQADVTARLPFISDDLAVAISQQGLEAALDQPLARILEQVQLA
                     LDSAQEKPDVIYLTGGSARSPLIKKALSEQLPGIPVAGGDDFGSVTAGLARWAEVVFR
                     "
     gene            complement(1785..1898)
                     /locus_tag="MOX77_004680"
     CDS             complement(1785..1898)
                     /locus_tag="MOX77_004680"
                     /inference="COORDINATES: protein motif:HMM:NF025322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Ibs family toxin"
                     /protein_id="HCA3360046.1"
                     /translation="MLKRESPSRGRGQNKERVMMKVVIIMVILLVISLPAY"
BASE COUNT          459 a          610 c          636 g          484 t
ORIGIN      
        1 aatccggcgc tcacgctaac ctgcacagtg tgggtgggca gatggggcct cacgctgacc
       61 agtccgcgat gctcgcccac caccaggctg cgcgcataaa agccctcgcc tactgtttcc
      121 acgccgtcca ccgcacgcgc ggcaagaaag cccaacatcc acgaccagtc gtaaggcggc
      181 tgccagctca gggtaaacat acttttctcc tttatttgac ctttcagcat aaacgctaat
      241 cgcacgtaac gccttgcttt catattccag ttgtcgccgc gacgacattt cgctaaagtc
      301 acgccccttc ttcactggca tggggatttt aaggtgttta taggatttga ttacggtacg
      361 gcaaactgct cggtcgccat tatgcgcgac gggcatccac agttgctgac aatggagaat
      421 aacagcgcat tactgccgtc tatgctgtgt gcgccgacgc gcgaagcggt gagcgagtgg
      481 ctgtatcgcc atcatgatgt gccggcaacg gacgaagaaa cccaggcgct gctacgccgc
      541 gctatacgct acaaccgcga ggaagatatt gaggttggcg cgcaaagcgt acagtttggt
      601 ctggcgtcgc tggcgcacta tattgacgat ccccaggaag tctggttcgt caaatcgccg
      661 aaatcctttt taggcgccag cggcctgaaa ccgcagcagg tcgcgctgtt tgaagatttg
      721 gtctgcgcca tgatggtaca tattcttcat acggcgcaca gccaattgcc ggaggccatt
      781 actcaggcgg tgatcggtcg cccgatcaac tttcagggac tcggcggcga tgacgcgaac
      841 cgccaggcgc agggtattct ggagcgggca gcaaaacgcg ccggttttca ggaggtggta
      901 ttccagtatg aaccggtcgc agcgggcctg gactacgagg ctacgctgcg ggaagagaag
      961 cgtgtgctgg tcgtggatat tggcggcggt accaccgact gttccatgct gctgatgggg
     1021 ccgcagtggc gtcagcgcgc cgatcgtgaa aacagcctgt tggggcacag cggttgccgc
     1081 gtgggcggaa acgatctgga tatcgcgctg gcctttaaaa atctgatgcc tttgctgggc
     1141 atgggcggcg aaaccgaaaa aggtatcgcc ctgccggtgc tgccgtggtg gaacgccgtc
     1201 gcgattaacg acgtcccggc gcaaagcgat ttttacagta gcgcgaatgg tcgtctgttg
     1261 aacgatttgg ttcgcaacgc gcgtgaagca gacaaggtcg cgttgctgct caaggtctgg
     1321 cgtcagcggc ttagctaccg cctggtacgc tgcgcggaag agagcaaaat cgccctttcc
     1381 ggccaggcgg atgttacggc gaggctgcca tttatcagcg acgacctggc ggtcgctatc
     1441 agccagcaag gactggaagc ggcgctggat caaccgctgg cgcgtattct ggaacaggtg
     1501 caactggcgc tggacagcgc gcaggaaaaa ccggatgtca tctatctgac cggcggcagc
     1561 gcccgttcgc cattgattaa aaaagcgctt tccgaacagc taccgggcat acccgtcgct
     1621 ggcggcgatg atttcggctc cgtcaccgca ggactggcgc gctgggcgga ggtcgttttc
     1681 cgctaagcgc ctcgcaagcc cagcgctgat ggattgacat tattcttgat gtggcttaac
     1741 gtcaggagtg agggtaaggg aggattcctc ctccccctgg tgtcttagta agctggtagg
     1801 ctaatcacta agagtatcac cattatgatg actaccttca tcataaccct ttccttattt
     1861 tggccccttc ctcgggaggg gctttcccgt ttcagcatcc tgctgaaatc ggtggcttat
     1921 cttcattgcc gtgccggcac tttaccgcac tccggcgcgt taacgatttt caccgatgag
     1981 agttgcgtag cgcctcgcaa agcgggtcgc cattcagaat aatcccgacc gtgttccata
     2041 attcctccat ttttctccct tccctgctga ctacaataga ggaagcaaca ttccgcaaaa
     2101 cgtttcagga tgagaaactt ataccgatga aaggcagtaa tactttccgc tgggcaatag
     2161 cgattggggt tgtagtggcc gccgccgca
//
LOCUS       DAGWFR010000334         2160 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.337, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000334 DAGWFR010000000
VERSION     DAGWFR010000334.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2160)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2160)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2160
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.337"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..894)
                     /locus_tag="MOX77_004681"
     CDS             complement(<1..894)
                     /locus_tag="MOX77_004681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462482.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3360047.1"
                     /translation="MIEKKTCCKNAVILMPEPVAEPALNGLRLNLRIVSIVMFNFASY
                     LTIGLPLAVLPGYVHDAMGFSAFWAGLIISLQYFATLLSRPHAGRYADVLGPKKIVVF
                     GLCGCFLSGLGYLLADIASAWPMINLLLLGLGRVILGIGQSFAGTGSTLWGVGVVGSL
                     HIGRVISWNGIVTYGAMAMGAPLGVLCYAWGGLQGLALTVMGVALLAVLLALPRPSVK
                     ANKGKPLPFRAVLGRVWLYGMALALASAGFGVIATFITLFYDAKGWDGAAFALTLFSV
                     AFVGTRLLFPNGINRLGGLNVA"
     gene            984..2033
                     /locus_tag="MOX77_004682"
     CDS             984..2033
                     /locus_tag="MOX77_004682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HCA3360048.1"
                     /translation="MATAQPDKTGMHILLKLASLVIILAGIHAAADIIVQLLLALFFA
                     IVLNPLVTWFIRRGVKRPLAITIVVVVMLIVLTALVGVLAASLNEFIAMLPKYSKELT
                     RKVLHLQELMPFLNLHMSPERMLRGMDSDKIMLFTTTLMTGVSGAMASIVLLVMTVVF
                     MLFEVRHVPYKLRFALNNPQIHIAGLHRALKGVSHYLALKTLLSLWTGAIIWLGLALM
                     DIQFALMWGVLAFLLNYVPNIGSVISAVPPMIQALLFNGFYECVLVGALFLVVHMVIG
                     NIMEPRMMGHRLGMSTLVVFLSLLVWGWLLGPVGMLLSVPLTSVCKIWMETTKGGSKL
                     AILLGPGRPKSRLPG"
     gene            2085..>2160
                     /locus_tag="MOX77_004683"
     CDS             2085..>2160
                     /locus_tag="MOX77_004683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP synthase"
                     /protein_id="HCA3360049.1"
                     /translation="MYQIVLGKVSTLSAGQLPDALIAQA"
BASE COUNT          512 a          596 c          557 g          495 t
ORIGIN      
        1 ggcgacattc aacccgccta agcgattgat accgttaggg aacagcaaac gcgtgccgac
       61 aaacgcgacg ctaaataacg tgagcgcaaa ggcggcgcca tcccaacctt tagcatcata
      121 aaataaggta ataaacgtcg cgatgacgcc aaaccctgcc gaggccagcg ccaacgccat
      181 accatacagc cagacacgcc ccagcaccgc gcgaaacggc agcggcttgc ctttgttcgc
      241 cttcaccgac ggacgtggaa gggctaacag taccgccaac agcgccacgc ccatcaccgt
      301 tagcgccagt ccctgtaacc cgccccaggc ataacacagc acgcccagcg gcgcgcccat
      361 cgccattgcg ccgtaggtga cgataccgtt ccaggagata acccgaccaa tatgcaacga
      421 cccgacgacg ccgacgcccc acagtgtcga accggtgccg gcaaaacttt gcccaatccc
      481 caaaatcacg cgacccagcc ccagtagcaa caaattgatc atcggccagg cgctggcgat
      541 atccgccagc aggtagccga gtccgcttaa aaaacagccg cataagccaa agacaacgat
      601 ttttttcggc cctaatacat ccgcataccg cccggcatgg ggacggctta acagagtggc
      661 gaagtattgc aggctgataa taagccccgc ccagaacgcg ctgaatccca tcgcatcatg
      721 cacatagccg ggcaagacgg cgagcggcag gccgatagtc aggtagctgg caaagttaaa
      781 catcacgatg gagacaatac gcagattgag gcgcaatccg tttagcgccg gttcagcgac
      841 gggttcgggc atgagtatca ccgcattttt acaacatgtt ttcttttcta tcatggcgcg
      901 cggtgaaaat cagtagtgag attcagatta tcggtatcag ggcagccgct acacttagaa
      961 aaaaacacaa caaggaaaac ttcatggcaa ccgctcaacc cgacaaaacg ggtatgcata
     1021 ttctgctgaa actggcctcc ctggttatta ttctcgccgg gattcatgcc gcggcggata
     1081 ttattgtaca actcttactg gcgctctttt tcgccatcgt tcttaatcca ttagtgacct
     1141 ggtttattcg ccggggcgtg aagcgaccgc tggcgattac tatcgtggtg gtcgtcatgc
     1201 tgatcgtgct taccgcgctg gtgggtgtgc ttgccgcatc gcttaatgaa tttatcgcta
     1261 tgctgcctaa atacagcaag gagctgacgc gtaaggtttt acatcttcag gagttaatgc
     1321 ccttcctgaa tttacatatg tcgccggaac gtatgctccg tgggatggat tccgataaaa
     1381 tcatgctctt caccacaaca ttaatgaccg gcgtatcggg cgcgatggca agcattgtgc
     1441 tgctggtgat gaccgtggtt tttatgctgt ttgaggtgcg tcacgtgcct tataaattac
     1501 gtttcgcgct taacaatcca caaatccata ttgccggcct gcaccgcgcc ctgaaaggcg
     1561 tctcgcatta tctggcgctg aaaacgctgc tcagtctatg gacgggcgcg attatctggc
     1621 tggggctggc attaatggat attcagtttg cgctaatgtg gggcgtactg gcctttttgc
     1681 tcaattacgt tcctaatatc ggctcggtga tttccgccgt tccccccatg attcaggcgt
     1741 tgttatttaa cggcttttac gaatgcgtac tggtcggcgc gctctttttg gtggttcata
     1801 tggtgattgg caacattatg gagccacgca tgatgggcca tcgtctgggg atgtccacgc
     1861 tggtggtatt tctttcgtta ctggtctggg gatggctatt aggcccggtc gggatgctct
     1921 tgtccgttcc tttgaccagc gtctgcaaaa tctggatgga aaccactaaa ggcggcagca
     1981 aactggcgat cttactgggg ccaggccgac cgaaaagccg tttaccggga tgaggcgaca
     2041 gatgctacaa tctcctcttc ttcataggca acgttggtcc tgatatgtac cagatcgttc
     2101 tgggaaaagt gtcaacatta agcgcaggtc aattgcccga cgcgttaatc gctcaggcgc
//
LOCUS       DAGWFR010000335         2151 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.338, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000335 DAGWFR010000000
VERSION     DAGWFR010000335.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2151)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2151)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2151
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.338"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..354)
                     /locus_tag="MOX77_004684"
     CDS             complement(<1..354)
                     /locus_tag="MOX77_004684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF480 domain-containing protein"
                     /protein_id="HCA3360050.1"
                     /translation="MKYELTATEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNR
                     EPVMNLTEQEVQEQLDNLVKRHFLRTVSGFGNRVTKYEQRFCNSEFGDLKLSAAEVAL
                     VTTLLLRGAQTPGELR"
     gene            complement(390..974)
                     /gene="rimJ"
                     /locus_tag="MOX77_004685"
     CDS             complement(390..974)
                     /gene="rimJ"
                     /locus_tag="MOX77_004685"
                     /EC_number="2.3.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S5-alanine
                     N-acetyltransferase"
                     /protein_id="HCA3360051.1"
                     /translation="MFGYRSNVPKVRLTTDRLVVRLVHERDAWRLADYYAENRHFLKP
                     WEPVRDESHCYPSGWQARLGMIGEFHKQGSAFYFALLDPEEKEIIGVANFSNVVRGSF
                     HACYLGYSIAQEWQGQGLMFEALTAAIRYMQRTQHIHRIMANYMPHNKRSGALLARLG
                     FEKEGYAKDYLLIDGQWRDHVLTALTTPLWTPGR"
     gene            1211..>2151
                     /gene="mdtH"
                     /locus_tag="MOX77_004686"
     CDS             1211..>2151
                     /gene="mdtH"
                     /locus_tag="MOX77_004686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter MdtH"
                     /protein_id="HCA3360052.1"
                     /translation="MSRVSQARNLGKYFLLIDNMLVVLGFFVVFPLISIRFVDQMGWA
                     AVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMGIAHEPWLL
                     WFSCFLSGLGGTLFDPPRSALVVKLIRPEQRGRFFSLLMMQDSAGAVIGALLGSWLLQ
                     YDFRLVCATGAILFILCALFNAWLLPAWKLSTARTPVREGMRRVMSNKRFVTYVLTLA
                     GYYMLAVQVMLMLPIMVNDIAGSPAAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHR
                     LMAGLLVMSLSMLPIGMVGNLQQLFTLICAFYIGSVIA"
BASE COUNT          451 a          583 c          552 g          565 t
ORIGIN      
        1 acgcaactcg ccgggcgttt gcgcgccgcg cagcagcaac gtagtgacga gcgccacttc
       61 cgccgcgcta agtttcagat cgccaaattc ggaattacag aagcgctgtt catatttggt
      121 gacgcggttg ccaaacccgc tgaccgtacg caaaaagtgg cgtttcacca ggttatcgag
      181 ctgttcttgt acctcttgtt ccgtcaggtt catcaccggt tcacggttgg ttttctgatt
      241 acaggctgtc accaccccgt tgacggaaag cggatactgt tccggcgttg tcacctgctt
      301 ttccagcaga cagccaatca ctcgcgcttc agtggcggtt aattcatatt tcatcgtttt
      361 ctccctttgc ctctcattcc gtaagccgct caacgccccg gcgtccataa cggcgtggtt
      421 aacgccgtca ggacatggtc gcgccattgt ccatcaatca acaggtaatc tttcgcatag
      481 ccttcttttt caaagccaag ccgcgccagc aacgcgccgc tacgtttgtt gtgcggcata
      541 tagttcgcca tgatacggtg gatatgctga gtgcgctgca tatagcgaat cgcagcggtt
      601 aaggcttcaa acatcagccc ttgcccctgc cactcttgcg caatggaata gcccagataa
      661 caggcatgaa aagaaccgcg caccacattg gaaaaattcg ccacgccgat aatttctttt
      721 tcttccggat caagtagcgc gaaatagaag gcggagccct gtttgtgaaa ttcaccgatc
      781 attcccagac gcgcctgcca tcctgaagga taacaatgac tttcatcacg gaccggttcc
      841 cagggtttta aaaaatgacg attttccgcg taataatcgg ccagacgcca ggcatcacgc
      901 tcatgcacta aacgtaccac cagacgatcg gtggttaagc gcacttttgg cacgttactg
      961 cgatagccaa acattctata cctactcctt cctgtaacgt cttcagcacg ccagtaacat
     1021 tactatacct gcgcaaccag gccctgtgaa aagcgcaaat cgtcattttt tgaattgctg
     1081 ccacattttg atgaaaactc tcgattaaaa aggacttttg ataaaaaaat attgtcccgc
     1141 taacggtagg aaaaaacgaa acgccgccgc agaatagaag acgctcatct tttatttccc
     1201 gggaggggaa atgtcgcgcg tctcgcaggc gaggaacctg ggtaaatatt ttcttctcat
     1261 cgataacatg ttagtggtgc tgggtttttt cgtcgtcttc ccgctcatct ctattcgctt
     1321 tgtcgatcaa atggggtggg ctgccgtaat ggtagggatc gcgctcggcc tgcgtcagtt
     1381 tattcaacaa ggtctgggca tttttggcgg cgccatcgcc gatcgctttg gcgcgaaacc
     1441 gatgattgtc accggtatgc tgatgcgcgc cgcaggcttt gccaccatgg gtatcgcgca
     1501 tgagccctgg ctcttgtggt tttcctgctt tctttccggt ctcggcggta cgcttttcga
     1561 cccgccgcgt tcagcgctgg tggtcaaatt aattcgtccg gagcaacggg gccgcttctt
     1621 ctctctgttg atgatgcagg acagcgcggg cgcggtgatt ggcgcgctgc tgggaagctg
     1681 gttgctacaa tacgattttc gcctggtctg cgcgacgggc gctattttgt tcatattatg
     1741 cgcccttttc aacgcatggc tgcttccggc ctggaagcta tcaacggcca gaacgccggt
     1801 gcgtgaagga atgcgccgcg tcatgagcaa taaaaggttt gtcacctacg tgctgacgct
     1861 ggcgggctac tatatgctgg cggtacaggt catgttaatg ctgccgatta tggtaaacga
     1921 tatcgccggt tcgcctgctg ccgtgaaatg gatgtacgct attgaggcgt gtctctcgct
     1981 gacgttgctc tacccgattg cccgctggag cgaaaagcgt tttcggctgg agcatcggct
     2041 gatggccggt ttgctcgtca tgtcgctgag catgctcccc atcgggatgg tgggcaattt
     2101 acagcagctt tttacgctta tttgcgcttt ctacatcggc tcggttatcg c
//
LOCUS       DAGWFR010000336         2142 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.339, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000336 DAGWFR010000000
VERSION     DAGWFR010000336.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2142)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2142)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2142
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.339"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..>2142
                     /locus_tag="MOX77_004687"
     CDS             <1..>2142
                     /locus_tag="MOX77_004687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="amino acid adenylation domain-containing
                     protein"
                     /protein_id="HCA3360053.1"
                     /translation="IPRADLALALVTLWLGRLCGRMDYAAGFIFMRRMGSAALTATGP
                     VLNVLPLAVNLHATEDLPTLAKRLAAQLKKMRRHQRYDAEQIVRDSGRAAGETPLFGP
                     VLNIKVFDYHLDFPGIQAQTHTLATGPVNDLELALFPDENGGLDIELLANAQRYDDAT
                     LSRHALRLMALITQFADNPALRCGDAQMLLAEEQTQLTHLNNTAVTIPAATLSDLVAQ
                     QAQKTPEASALADAHYHFTYREMREQVVALAYALRERGVQPGDSVAVALPRSVFLTLA
                     LHGIVEAGAAWLPLDTGYPDDRLRMMLEDAQPKLLITTQAQLARFHDIPGMEYLCYSQ
                     PLPVSDATPLGLSLPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQDHYPLTADD
                     VVAQKTPCSFDVSVWEFFWPFIAGAKLVMAEPEAHRDPLAMQRFFAQYGVTTTHFVPS
                     MLAAFIASLTPASAGKSCASLKRVFCSGEALPTALCREWETLTNAPLHNLYGPTEAAV
                     DVSWYPACGDELAAVDGNSIPIGYPVWNTGLRILDAHMQPVPPGVAGDLYLTGIQLAQ
                     GYLGRPDLTASRFIADPFAPGERMYRTGDVARWLDSGVVEYLGRSDDQLKIRGQRIEL
                     GEIDRVMQTLPDVEQAVAHACVFNQAAATGGDARQLVGYLVSHSGLPLDLPALQDKLR
                     QKLPAHMVPVVLLQLASLPLSANGKLDRKALP"
BASE COUNT          411 a          580 c          675 g          476 t
ORIGIN      
        1 gataccgcga gcggatcttg ccctggcgct ggtgacgttg tggctgggac gattatgtgg
       61 gcgtatggat tatgccgccg gatttatctt tatgcggcgg atgggctcag cggcgttaac
      121 ggcgaccggg cctgtcctta acgtgttgcc gctggcggtt aaccttcatg cgacggaaga
      181 tctgccaacg ctggcgaagc gtcttgcggc gcagttaaag aagatgcgcc gccaccagcg
      241 ttacgacgcc gaacagattg tacgcgatag cgggcgagcc gcaggggaaa cgccgctatt
      301 tggcccggtg ctcaacataa aagtatttga ttatcatctg gattttcctg gcatacaggc
      361 gcaaacccat accctggcga cggggccggt taacgatctt gaactggcgc tttttccgga
      421 tgaaaacggc ggtctggata ttgaattgct ggcgaatgcg cagcgttacg atgacgccac
      481 gctttcccgc catgccttac ggttgatggc gcttatcacg cagtttgctg ataacccggc
      541 gctgcgctgc ggcgatgcgc aaatgctgct ggcggaagaa caaacgcaat taacacacct
      601 taataatacg gcggtaacga ttcccgccgc cacgcttagc gatttggtgg cgcagcaggc
      661 gcaaaaaacg ccagaggctt ccgcgttggc agatgcgcat tatcacttta cctaccgtga
      721 aatgcgcgaa caggttgtgg cgctggcata cgcgctgcgg gaacgcggcg ttcagcctgg
      781 cgatagcgtg gcggtggcgt tgccgcggtc ggtttttctg accttagcgc tgcacggcat
      841 tgtcgaagcg ggcgccgcct ggctgccgct ggataccggt tatcctgacg atcggctgcg
      901 aatgatgctg gaagatgcgc agccgaaact gttaattacg actcaggcgc agctggcgcg
      961 ctttcacgat attccgggga tggaatattt gtgttatagc caaccgctac cggtcagtga
     1021 cgccactccg ctggggctgt cgctaccgca tcataccgct tacatcattt tcacctctgg
     1081 ttcgacgggc aggccgaaag gggtgatggt gggacaaacg gcgatagtca accggctgct
     1141 gtggatgcag gatcactatc cgttgacggc ggatgatgta gtagcgcaaa aaacaccgtg
     1201 cagttttgac gtctcagtat gggagttttt ctggccgttt atcgccgggg cgaaactggt
     1261 gatggctgaa ccggaagcgc accgcgatcc gctcgcgatg cagcggttct ttgcgcaata
     1321 cggcgtcacg accacccatt ttgtgccgtc gatgctggcg gcctttattg cctcgctcac
     1381 gccagcgtcg gctgggaaaa gctgcgcttc cttaaagcgc gttttctgta gcggcgaggc
     1441 cctgccgacg gcgctgtgcc gcgaatggga gacgttaacc aacgcgccgc tacacaatct
     1501 gtacgggcca acggaggccg cggtggatgt gagctggtat ccggcctgtg gcgatgagct
     1561 ggcggctgtt gacggcaaca gtatcccgat tggttatccc gtctggaata ccggtttacg
     1621 tattctcgat gcgcatatgc agccggtgcc gccgggcgtg gctggcgatc tctatcttac
     1681 cggtatccaa ctggcgcagg gctatctggg gcgtccggat cttaccgcca gccgttttat
     1741 cgccgatcct tttgcgccag gtgaacggat gtaccgtacc ggagatgtgg cgcgctggct
     1801 ggattccggc gtggtggagt acctgggacg cagcgacgat cagctcaaaa ttcgggggca
     1861 acgtattgaa ctgggtgaga ttgaccgcgt catgcaaacg ctgccggatg ttgaacaggc
     1921 ggtagcacat gcctgcgtct ttaatcaggc ggcggcgacg ggcggggatg cccggcaact
     1981 ggtcggctat ctggtgtcgc actccggttt accgctggat ttaccggcgc tgcaggataa
     2041 attacgccaa aaacttcccg cgcatatggt gccggttgtg ctgttgcaac ttgccagctt
     2101 gccgcttagc gctaatggca agctggatcg caaagccctg cc
//
LOCUS       DAGWFR010000337         2121 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.340, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000337 DAGWFR010000000
VERSION     DAGWFR010000337.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2121)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2121)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2121
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.340"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..2116
                     /gene="katE"
                     /locus_tag="MOX77_004688"
     CDS             <1..2116
                     /gene="katE"
                     /locus_tag="MOX77_004688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="catalase HPII"
                     /protein_id="HCA3360054.1"
                     /translation="TAPGSLKAPETANDKLTALDAFRKGSENYALTTNQGVRIADDQN
                     SLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSAAHGYFQPYKDLSDITKAA
                     FLCDPQKITPVFVRFSTVQGGAGSADTVRDIRGFATKFYTEEGIFDLVGNNTPIFFIQ
                     DAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAISDRGIPRSYR
                     TMEGFGIHTFRLINAQGKATFVRFHWKPLAGKASLVWDESQKLTGRDPDFHRRDLWEA
                     IEAGDFPEYELGLQLIAEEDEFKFDFDLLDPTKLIPEELVPVQRVGKMVLNRNPDNFF
                     AENEQAAFHPGHIVPGIDFTNDPLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYH
                     NFQRDGMHRMDIDTNPANYEPNSINDNWPRETPPAPKRGGFESYQERVDGNEIRERSP
                     SFGEYYSHPRLFWLSQTPIEQQHIIDAFSFELGKVARAYIRERVVDQLAHIDVTLAQG
                     VAHNLGFALTHEQTQIAPPPDVNGLKKDPALSLYAVPDGDVKGRVVAILLNDKVNAAE
                     LLTIFQALKAKGVHVKLLYSRMGEVTADDGSTLTIAATFAGAPSLTVDAVIVPCGNIA
                     DIESCGDARYYLLEAYKHLKPIALAGDARRFKALLNIDSQGEEGLVEADNVDHHFMDT
                     LLTLMAAHRVWSRAGKINAIPA"
BASE COUNT          511 a          578 c          555 g          477 t
ORIGIN      
        1 aacggccccc ggcagcttaa aagcgcccga gaccgcgaat gataagctca ccgccctcga
       61 cgcctttcgt aaaggcagcg aaaattatgc gctgaccacc aatcagggcg tgcgcatcgc
      121 cgacgatcaa aattctcttc gcgccggcag ccgtggccct acgctgttgg aagattttat
      181 cctgcgcgag aaaattaccc actttgacca tgagcgtatc ccggagagga tcgttcacgc
      241 ccgcggatct gcagcgcacg gctatttcca gccatataaa gacctgagcg acatcacgaa
      301 agccgcgttt ctgtgcgatc cacagaaaat taccccggtc tttgttcgct tttcgacagt
      361 acagggcggc gcggggtctg ctgataccgt acgtgatatc cgcggttttg cgaccaaatt
      421 ttataccgaa gagggaattt tcgatctcgt cggtaataac acgccgatct tttttatcca
      481 ggatgcgcat aagtttccgg attttgtgca cgccgttaag cccgaaccac attgggctat
      541 tccgcaaggg cagagcgcgc acgacacctt ctgggactat gtttccttac agcctgagac
      601 gctgcacaac gtcatgtggg caatatcgga tcgcggtatt ccacggagtt atcggacgat
      661 ggaagggttc ggcattcaca ccttccgtct gatcaatgca caagggaaag cgacctttgt
      721 ccgtttccac tggaaaccgt tggcaggtaa agcctcgctg gtatgggatg agtcacaaaa
      781 actgaccggt cgcgatccgg attttcaccg ccgggatctg tgggaggcca tcgaagcggg
      841 cgatttcccg gaatacgagc tgggcctaca actcattgcc gaagaggatg aatttaaatt
      901 cgattttgat ctgctcgatc cgaccaaact gattccggaa gagttggtgc cagtacaacg
      961 cgtcggcaaa atggtgttaa accgtaatcc ggataacttt ttcgctgaaa acgaacaggc
     1021 ggcatttcat ccaggacata ttgttcccgg cattgatttt accaacgatc cgctgttaca
     1081 ggggcgtctg ttctcttata ccgacacgca aatcagtcgt ctgggcgggc caaacttcca
     1141 cgaaattccg attaaccgcc ctacctgccc ctaccataac ttccagcgtg acggtatgca
     1201 ccggatggat atcgacacca atccggcgaa ctatgaacca aactccatta atgacaactg
     1261 gccacgcgaa acgccgccag cgccaaaacg cggcggcttc gaatcatacc aggaacgcgt
     1321 ggatggtaat gaaatccgcg aacgcagccc ctctttcggt gaatattact cgcatcctcg
     1381 cctgttctgg ctcagtcaga cgccgataga acagcagcat attattgacg cgttcagctt
     1441 tgagctgggt aaagtcgccc gcgcgtatat tcgggagcgg gtggtcgatc agttagcgca
     1501 tattgatgtc acgctggctc agggcgtcgc gcataatctc ggttttgcac tcacccatga
     1561 gcaaacgcaa attgccccgc ctcctgatgt caacggtctg aaaaaagatc cggcgctcag
     1621 cctgtatgcg gtgccggacg gcgatgttaa aggccgagtg gtcgctattc tgctgaacga
     1681 caaggttaac gccgccgaac tgttgaccat ttttcaggct ttaaaagcca aaggcgtcca
     1741 cgtaaaactg ctctattcac ggatggggga agtaacggct gatgacggtt caacattaac
     1801 tattgcggca acctttgccg gcgcgccgtc gctaacggtc gatgcggtaa tagtaccgtg
     1861 cggcaatatt gccgatatcg agagttgcgg cgatgcccgt tactaccttc tggaagccta
     1921 caaacatctg aagcccatcg cactggcagg cgacgcccga cggtttaagg cgcttttaaa
     1981 cattgatagc cagggggaag aaggacttgt tgaggcagat aacgttgacc accactttat
     2041 ggacactctg ctgacgctga tggcggcaca ccgtgtctgg tcgcgtgcgg ggaaaattaa
     2101 cgcgattcct gcataaacgg c
//
LOCUS       DAGWFR010000338         2073 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.341, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000338 DAGWFR010000000
VERSION     DAGWFR010000338.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2073)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2073)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2073
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.341"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..699
                     /locus_tag="MOX77_004689"
     CDS             <1..699
                     /locus_tag="MOX77_004689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HCA3360055.1"
                     /translation="LAGTGIEAQVNGERILICAAGKQPAAAFAGQISELENAGQTVVL
                     VLRNETVVGVLALQDTLRDDARDAIRELHQLGVNGVILTGDNPRAAAAIAGELDLAFK
                     TGLLPEDKVRAVTALNQQAPLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAAL
                     THNRLRGLAQMITLARATHANIRQNITIALGLKAIFLVTTLLGFTGLWLAILADTGAT
                     VLVTANALRLLRKN"
     gene            896..>2073
                     /locus_tag="MOX77_004690"
     CDS             896..>2073
                     /locus_tag="MOX77_004690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis citrate transducer"
                     /protein_id="HCA3360056.1"
                     /translation="MKNIKVITGVIATLGIFSALLLVTGILFYSAVSSDRLNFQNASA
                     LSYQQQELGGSFQTLIETRVTINRVAIRMLKNQRDPASLDAMNTLLTNAGASLNEAEK
                     HFNNYVNSEAIAGKDPALDAQAEASFKQMYDVLQQSIHYLKADNYAAYGNLDAQKAQD
                     DMEQVYDQWLSQNAQLIKLASDQNQSSFTQMQWTLGIILLIVLIVLAFIWLGLQRVLL
                     RPLQRIMAHIQTIADGDLTHEIEAEGRSEMGQLAAGLKTMQQSLIRTVSAVRDNADSI
                     YTGAGEISAGSSDLSSRTEQQASALEETAASMEQLTATVRQNTDNARQATGLAKTASE
                     TARKGGRVVDNVVSTMNDIAESSEKIVDITSVIDGIAFQTNILALNAAVEAARAGEQG
                     R"
BASE COUNT          516 a          556 c          573 g          428 t
ORIGIN      
        1 ctggccggca ccgggattga agcgcaggtt aacggcgaac gtattctgat ttgcgcggcg
       61 ggaaaacagc ctgcggcagc gtttgccggg caaattagcg aactggaaaa cgccgggcag
      121 acggtggttc tggtgctacg taacgagacc gttgttggcg tcctcgccct ccaggatacg
      181 ttgcgtgacg atgcgcgcga cgccatccgc gaactgcatc agttaggcgt taacggcgtg
      241 attctgaccg gcgataaccc acgggcggcg gcagcgattg ccggcgagct ggatctggcg
      301 tttaaaaccg gactactgcc ggaagataag gtgcgggcag tcaccgccct taaccaacaa
      361 gcgccgctgg cgatggtggg cgacggcatt aatgatgcgc ccgcgatgaa agccgccagt
      421 atcggaattg cgatgggcag cggtactgac gtcgcgctgg aaacggctga cgccgccctt
      481 actcataacc gtctgcgcgg gttagcgcag atgattacgc tggcgcgcgc tacccacgcg
      541 aatatccggc agaacatcac cattgcgctg gggctgaaag ccattttcct ggtgacgacg
      601 ctactgggtt ttaccgggct atggctggca atcctggcgg atacgggagc cacggtatta
      661 gtgaccgcca acgcgctacg tttgctgcgt aaaaactaat cttctcccac ccggcggcat
      721 gtcgccgggt tatcccgcga tattcctttc tttgtacata ttattcacgc gaaaatcatt
      781 tattttctat tacttatcaa accattaatc agaaatagcg cgatttgatg taaggttaat
      841 ttttatccaa ccgatattga tcataccgtc tacaaaataa ggaatgttag gcactatgaa
      901 aaatatcaaa gtcatcaccg gcgttatcgc gacgctgggc atatttagcg ccttattgtt
      961 ggtgacagga atactgtttt attccgccgt cagcagcgat cggctgaatt tccagaatgc
     1021 gagcgcactg agttaccaac aacaggaact gggcggcagt tttcagacat tgattgaaac
     1081 ccgcgtcacc attaaccgcg tggcgatacg catgttaaaa aatcagcgcg atcccgcctc
     1141 gctggacgcc atgaacacgc tgttaaccaa cgctggcgcg tcgctcaacg aagcggaaaa
     1201 gcatttcaac aactacgtga actccgaagc gatcgcaggc aaagatccgg cgttggatgc
     1261 ccaggccgaa gccagcttta agcagatgta tgacgttttg cagcagtcta tccactatct
     1321 taaagccgat aattacgccg cctatggcaa ccttgacgcg caaaaagcgc aggatgacat
     1381 ggagcaggta tatgaccagt ggctctctca aaatgcgcaa ttaataaaat tagccagcga
     1441 tcagaatcag agcagtttta cccagatgca atggacgctg gggataattc tacttatcgt
     1501 gctcatcgtg ctggcgttta tctggctggg gctgcaacgc gttctactcc gcccgctgca
     1561 acggattatg gcgcacattc aaacgatcgc cgacggcgat cttacccatg agatagaggc
     1621 tgaaggacgt agtgaaatgg gccaactggc tgccggtctc aaaacgatgc agcagtcgtt
     1681 aatccgtacc gtcagcgcgg tgcgcgataa cgcagactct atctatactg gcgcaggcga
     1741 aatttccgct ggcagcagcg acctctcttc ccgtaccgaa cagcaggcct cggcgctgga
     1801 ggagaccgcc gccagcatgg aacagttaac cgccacggta cggcaaaaca ccgataacgc
     1861 acgacaggcg acgggtctgg cgaaaaccgc atcagaaacc gcgcgtaaag gaggacgcgt
     1921 ggtggataac gtagtgagca ccatgaacga tatcgccgaa agctcggaaa aaatcgtgga
     1981 catcaccagc gtgattgacg gtatcgcctt ccagactaat atcctggcgc tgaacgctgc
     2041 ggtagaagcc gcccgcgccg gcgaacaggg gcg
//
LOCUS       DAGWFR010000339         2047 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.342, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000339 DAGWFR010000000
VERSION     DAGWFR010000339.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2047)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2047)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2047
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.342"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..239
                     /locus_tag="MOX77_004691"
     CDS             <1..239
                     /locus_tag="MOX77_004691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="diol dehydratase reactivase subunit alpha"
                     /protein_id="HCA3360057.1"
                     /translation="ALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAHYR
                     LVAGRGNIRGSEGPRNAVATGLILSWHKEFAYGQ"
     gene            229..579
                     /gene="pduH"
                     /locus_tag="MOX77_004692"
     CDS             229..579
                     /gene="pduH"
                     /locus_tag="MOX77_004692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propanediol dehydratase reactivase beta subunit
                     PduH"
                     /protein_id="HCA3360058.1"
                     /translation="MDSNHSAPAIVITVINDCASLWHEVLLGIEEEGIPFLLQHHPAG
                     DVVDSAWQAARSSPLLVGIACDRHSLVVHYKNLPASAPLFTLMHHQDSQAQRNTGNNA
                     ARLVKGIPFRDLNS"
     gene            599..874
                     /gene="pduJ"
                     /locus_tag="MOX77_004693"
     CDS             599..874
                     /gene="pduJ"
                     /locus_tag="MOX77_004693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propanediol utilization microcompartment protein
                     PduJ"
                     /protein_id="HCA3360059.1"
                     /translation="MNNALGLVETKGLVGAIEAADAMVKSANVQLVGYEKIGSGLVTV
                     MVRGDVGAVKAAVDAGSAAASVVGEVKSCHVIPRPHSDVEAILPKSA"
     gene            878..1360
                     /gene="pduK"
                     /locus_tag="MOX77_004694"
     CDS             878..1360
                     /gene="pduK"
                     /locus_tag="MOX77_004694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460991.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propanediol utilization microcompartment protein
                     PduK"
                     /protein_id="HCA3360060.1"
                     /translation="MANKEHRVKQSLGLLEVCGLALAISCADIMAKSASITLLALEKT
                     NGSGWMVIKIAGDVASVQAAITTGAQFAEQRNGLVAHKVIARPGEGILLAETPSPSVI
                     EPEPEASEIADVVSEAPAEEAPQESELVSCNLCLDPKCPRQKGEPRTLCIHSGKRGEA
                     "
     gene            1360..1992
                     /locus_tag="MOX77_004695"
     CDS             1360..1992
                     /locus_tag="MOX77_004695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate propanoyltransferase"
                     /protein_id="HCA3360061.1"
                     /translation="MDKELLQSTVRKVLDEMRQRPIPLGVSNRHIHLSAQDYERLFPG
                     HPISEKKALLQPGQYATEQTVTLVGPKGQLKNVRLLGPLRSVSQVEISRTDARTLGIA
                     APLRMSGNLKGTPGIRLVSPFGELELPSGVIVAQRHIHMSPLDALILKVSHGDRVSVA
                     IEGDERGLIFNNVAIRVSPDMRLEMHIDTDEANAAGADNPQAFARLVGPR"
BASE COUNT          450 a          586 c          599 g          412 t
ORIGIN      
        1 acgccctgcg cgcgctgcgt caggtcagtc caaccggcaa cattcgcgat attccgttcg
       61 tggtgctggt cggcggctcg tcgctggatt tcgaagttcc gcagttggtc accgatgcgc
      121 tggcgcacta ccgcctagtc gccgggcgag gaaatattcg cggcagcgaa ggcccaagaa
      181 acgcggtggc caccggtctg attctctcct ggcacaagga gtttgcatat ggacagtaat
      241 cacagcgccc cggctatcgt cattaccgtc atcaacgact gcgccagcct ctggcacgaa
      301 gtgctgctgg gcattgaaga ggaaggcatc cctttcctgc ttcagcatca cccagctgga
      361 gatgtcgttg acagcgcctg gcaggcggcg cgcagctcgc cgctgctggt cggcattgcc
      421 tgcgatcgac actcgctggt cgtacattac aagaatttac ccgcatcggc gccgcttttt
      481 acgctgatgc atcatcagga cagtcaggcc caacgcaaca ccggtaataa cgcggcacgg
      541 ctggtcaaag ggatcccttt ccgggatctg aatagctaag caacaggaga actgcagtat
      601 gaataacgca ctgggactgg ttgaaacaaa agggttagta ggcgccattg aagctgccga
      661 cgccatggtt aaatccgcca acgtacagct ggtgggctac gaaaaaattg gttctggcct
      721 ggttacagtc atggttcgcg gcgacgtcgg cgcggttaaa gcagccgtag atgccggcag
      781 cgcggcggca agcgtcgtgg gtgaagtgaa atcctgccac gttatcccgc gtccgcacag
      841 cgatgttgag gccattttac cgaaatcagc ctaatcgatg gcgaataagg agcaccgcgt
      901 gaagcaatca ctgggattac ttgaagtttg tggtctggca ctggctatca gctgcgccga
      961 tatcatggcg aaatccgctt ctatcacgct gctcgccctc gaaaagacca atggttcagg
     1021 ctggatggtg attaaaattg ccggtgatgt ggcctccgtg caggcggcca tcaccaccgg
     1081 tgcgcaattt gccgaacagc ggaatggtct ggtggcccac aaggttatcg ccaggcccgg
     1141 agaagggatc ctgctcgcag agacaccctc cccctccgtc attgaacctg agcctgaagc
     1201 gtcagagata gctgatgtcg tttctgaagc gccagccgaa gaggccccgc aggaatcaga
     1261 actggtcagc tgcaatctgt gtctggatcc aaaatgtccg cgccagaagg gcgaacctcg
     1321 tacgctttgc attcattccg gcaagcgagg tgaagcgtaa tggataaaga gcttctgcaa
     1381 tcaacggtcc gtaaagttct cgacgagatg cgccagcggc ctattccgct gggcgtctca
     1441 aaccgtcata tccacctgtc cgcgcaggat tatgagcggc tgtttcccgg ccatcccatc
     1501 agcgaaaaaa aagcgctact gcagccggga caatatgcta cggagcaaac cgtcaccctg
     1561 gtagggccga aaggacagct caaaaatgtg cgcctgctcg gcccgctgcg ctcggtaagc
     1621 caggtagaaa tatcgcgtac cgatgccaga acactgggga ttgccgcgcc gctgagaatg
     1681 tccggcaacc tgaagggcac acctggcatc cgcctggtca gcccctttgg cgaactggag
     1741 ctaccttccg gggttatcgt cgcgcagcgg catattcata tgtcgccgct tgatgcgctg
     1801 atcctgaagg tctcccacgg cgatagggtt tcggtagcga ttgaaggcga cgagcgcggg
     1861 ctgattttca acaatgtggc gattcgcgtt tcaccggaca tgcgcctcga aatgcacatt
     1921 gataccgatg aagccaacgc cgctggtgcc gataacccgc aggcctttgc ccggctggta
     1981 ggcccgcgat gaacggcgaa actctgcagc gcattgtcga ggagattgtc tcccgactgc
     2041 agcgtcg
//
LOCUS       DAGWFR010000340         2040 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.343, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000340 DAGWFR010000000
VERSION     DAGWFR010000340.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2040)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2040)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2040
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.343"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..1000
                     /locus_tag="MOX77_004696"
     CDS             <1..1000
                     /locus_tag="MOX77_004696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129466.1"
                     /note="Catalyzes the transfer of electrons from NADH to
                     ubiquinone; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HCA3360062.1"
                     /translation="LVGIIGAITLVMAGFAALVQTDIKRVLAYSTMSQIGYMFLALGV
                     QAWDAAIFHLMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVYACFLVGG
                     AALSALPLVTAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHGKE
                     QIHAHAGKGITHHLPLIVLMILSTFVGALIVPPLQGVLPQTTELAHGRVLTLEITSGV
                     VAIAGILIAAWLWLGKRTLVTSIANSAPGHLLGTWWYNAWGFDWLYDKVFVKPFLGIA
                     WLLKRDPLNALMNIPAILSRFAGKGLVLSENGYLRWYVASMSIGAVVVLALLMVLR"
     gene            1314..>2040
                     /locus_tag="MOX77_004697"
     CDS             1314..>2040
                     /locus_tag="MOX77_004697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HCA3360063.1"
                     /translation="MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMELTLALGL
                     QLWLQGGYSLTQSAGIPQWQSEFVLPWIPRFGISIHLALDGLSLLMVVLTGLLGVLAV
                     LCSWREIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHK
                     ASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYKATSVWTFNYEELLNTPMSHG
                     VEYLLMLGFFIAFAVKMPVVPLHG"
BASE COUNT          376 a          523 c          608 g          533 t
ORIGIN      
        1 tctggtgggc attatcgggg cgattacgct ggtcatggcg ggtttcgccg cgctggtgca
       61 gaccgacatc aaacgcgtgc tggcctattc caccatgagc cagattggct acatgttcct
      121 ggcgcttggc gtgcaggcgt gggatgcggc gattttccac ctgatgacgc acgccttctt
      181 taaagcgctg ctgttcctgg catccggctc ggtaattttg gcctgccatc acgaacagaa
      241 catctttaag atgggcggtc tgcgtaagtc cattccactg gtgtatgcct gcttcctggt
      301 ggggggcgcg gcgctgtcgg cgctgccgct ggtcactgcg ggcttcttca gtaaggatga
      361 gatcctggct ggcgcgatgg cgaacggtca tatcaatctg atggtggcgg gtctggttgg
      421 cgcgttcatg acctccctgt acaccttccg gatgattttc atcgtattcc acggtaaaga
      481 acaaattcat gctcatgcag ggaaggggat tacccaccat ctgccgctga ttgtcctgat
      541 gattctgtct acctttgttg gcgcgctgat tgtgccgcct ctgcaggggg tgctgccgca
      601 gacaactgaa ctggcgcatg gtcgtgtgtt gaccctggaa attacctctg gcgtagtggc
      661 gattgccggc atcctgattg ccgcatggct gtggctgggt aaacgtacgc tggtgacgtc
      721 gatcgccaac agcgcgccgg gccatctgct ggggacctgg tggtataacg cctggggctt
      781 tgactggctg tacgacaaag tattcgtcaa gccattcctc ggtatcgcct ggctgctgaa
      841 gcgcgacccg cttaatgcgt tgatgaacat tccggctatc ctttcccgtt ttgcaggcaa
      901 aggcctggta ctgagcgaga acggttattt gcgctggtat gtggcatcca tgagcatcgg
      961 cgcggttgtg gtgctggcgc tgctgatggt actgcgttga gtttgttggc tggatgaacg
     1021 actgccggat ggcgcagtgc ttatccggcc tacaaaccca aaaataattt ttagaattcg
     1081 ttgaaaatct gttcctgaag tacaggcgtc atcggcgaag tcagaccgga taccgccagc
     1141 gcacagcaac cggagcgtac tgaagtacgt gaggatgatt cgcgaagctc acccctacgg
     1201 ggccgtcctt acggacgttc aaaacgcgct gcgttttgtg tgagcactgg caggatttgg
     1261 gctgacgagt gagatagcct gagcaggagt aaatataagg gacatactta gctatgttat
     1321 taccctggtt gatattaatc ccctttatcg gcggctttct gtgctggcag accgaacgct
     1381 ttggcgtgaa agtgccgcgc tggatagcgc tgattaccat ggaactgacg ctggcgctcg
     1441 gtctgcaatt gtggttgcag ggcggctact cactgacgca atccgccggt attccacagt
     1501 ggcaatctga atttgtcctg ccgtggatcc cgcgttttgg catctctatc catctggcgc
     1561 tcgacggact gtcgctgcta atggtggtgc tgaccggcct gctcggcgtt ctggcagtgc
     1621 tttgctcttg gcgagaaatc gaaaaatatc agggcttctt ccacctcaac ctgatgtgga
     1681 tcttaggcgg cgttatcggc gtgttcctgg ccatcgacat gttcctgttc ttcttcttct
     1741 gggaaatgat gctggtgccg atgtacttcc tgatagcgct gtggggccac aaagcttctg
     1801 acggtaaaac gcgtatcacg gcggcaacca agttcttcat ttacacccag gcgagtggtc
     1861 tggtgatgtt gattgccatc ctggcgctgg tgtttgtgca ctataaagcg accagcgtgt
     1921 ggaccttcaa ctatgaagag ctgctgaata ccccgatgtc ccacggtgtg gaatatctgc
     1981 tgatgctggg cttcttcatc gccttcgcgg tgaaaatgcc ggtggttccg ctgcatggct
//
LOCUS       DAGWFR010000341         2035 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.344, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000341 DAGWFR010000000
VERSION     DAGWFR010000341.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2035)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2035)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2035
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.344"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            505..732
                     /gene="feoA"
                     /locus_tag="MOX77_004698"
     CDS             505..732
                     /gene="feoA"
                     /locus_tag="MOX77_004698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transporter A"
                     /protein_id="HCA3360064.1"
                     /translation="MQFTPDTAWKITGFAREISPAYRQKLLSLGMLPGSSFNVVRVAP
                     LGDPIHIETRRVSLVLRKKDLALIEVEAVSC"
     gene            751..>2035
                     /gene="feoB"
                     /locus_tag="MOX77_004699"
     CDS             751..>2035
                     /gene="feoB"
                     /locus_tag="MOX77_004699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(2+) transporter permease subunit FeoB"
                     /protein_id="HCA3360065.1"
                     /translation="MKKLTIGLIGNPNSGKTTLFNQLTGARQRVGNWAGVTVERKEGQ
                     FATTDHQVTLVDLPGTYSLTTISSQTSLDEQIACHYILSGDADLLINVVDASNLERNL
                     YLTLQLLELGIPCIVALNMLDIAEKQQVRIDVDALSTRLGCPVVPLVSTRGRGIEALK
                     LAIDRHNANDNVELVHYAQPLLREAGFLADAMAQEMPLQQRRWLGLQMLEGDIYSRAY
                     AGEAAQNLDTSLARLKDEMDDPALHIADARYQCIAAICDVVSNTLTAEPSRFTRAVDK
                     IILNRFLGLPIFLFVMYLMFLLAINIGGALQPLFDAGSVAIFIHGIQWIGYTLHFPDW
                     LTIFLAQGLGGGINTVLPLVPQIGMMYLFLSFLEDSGYMARAAFVMDRLMQALGLPGK
                     SFVPLIVGFGCNVPSVMGARTLDAPRERLMTIMMAP"
BASE COUNT          457 a          561 c          501 g          516 t
ORIGIN      
        1 acgcccagcc agccggtaac agcgccatga tggacgcgct ggcagcggca atgggaaaaa
       61 aacgctaatc gggtaatacg caggccgggt tacttcttat ccggcctgcg attttgcaat
      121 acgtccaacc ctttcttttt taattaacaa ttaaatctta cccattagaa tctgttaatt
      181 aatttccttc tgctatccgc actattaatt atcactttat taacagatga aaccttaatt
      241 aaacattaaa aacggtgaat atttgcacat tagaggtatt tgcaaaaaga caaataaatg
      301 ttgagccata tcaacatcgg cgcaaattat cgcttatttg tacattccgt cacattttaa
      361 tcgttgaaga tagaaaccat tctcattatc attgtgttgt tgattattta ctctttcctt
      421 cgttggctaa acatcgggtc tcctgccgcc cccctgagcg ccgcatgagg tatacatcca
      481 gttagtaaga aacaagtagg tcgtatgcaa ttcactcctg acactgcgtg gaaaatcacc
      541 ggctttgcgc gtgaaatcag cccggcgtat cgtcaaaaac tgctttcgct cggcatgttg
      601 cccggctctt catttaatgt tgtccgcgtc gcgcccttag gggatccgat ccatatcgaa
      661 acacgacgcg tgagtctggt tttgcgtaaa aaggatttgg cgttaataga agtggaagcg
      721 gtttcctgtt aatacagtga gtctataaaa atgaaaaaat taaccattgg tttaattggt
      781 aatcctaatt ccggcaagac caccttattt aaccaactca ccggcgcgcg tcagcgcgtg
      841 gggaactggg cgggcgtcac cgtcgagcgt aaagagggcc agttcgcgac aactgaccac
      901 caggtcacgc tggtagattt acccggcacc tattctctga cgaccatctc gtcacaaacc
      961 tctctcgacg aacagatcgc ctgccactac atcctgagcg gcgacgccga cctgttgata
     1021 aacgttgtgg acgcctccaa tctggagcgc aacctctatt tgacgctgca gctgctggag
     1081 ctgggtatcc cctgtattgt cgcgctcaac atgctggata tcgccgaaaa acagcaggtt
     1141 cgtattgatg tcgacgctct gtccacgcgt ctgggttgcc ctgtcgtacc gctggtatcg
     1201 actcgcggtc gcggtatcga ggcgctgaaa ctggccattg atcgtcacaa cgctaacgac
     1261 aacgtcgaac tggtgcatta tgcccagccg ctgctgcgcg aagcgggttt cctggccgac
     1321 gcgatggccc aggagatgcc tttacaacag cgccgctggc tgggtctgca aatgctggag
     1381 ggcgatatct acagccgggc ttacgcaggc gaggcggcgc aaaacctgga cacctccctt
     1441 gcccgtctga aggacgaaat ggacgacccg gcgctgcata tcgccgacgc ccgttaccag
     1501 tgtatcgccg ctatttgcga cgtggtcagc aataccctga cagccgaacc cagccgcttc
     1561 accagggcgg tcgataaaat tatcctgaac cgcttcctcg gcttaccgat ttttttgttc
     1621 gtgatgtacc tgatgttcct gctcgccatt aacatcggcg gcgcgttgca acccctgttt
     1681 gatgccggtt ccgtcgccat ctttattcat ggcattcaat ggattggcta cacgctgcac
     1741 ttcccggatt ggttaaccat cttcctggcg caaggtcttg gcggcgggat caataccgtc
     1801 ctgccgctgg tgccgcaaat cgggatgatg tacctgttcc tctccttcct tgaagactcc
     1861 ggttatatgg cgcgcgcggc cttcgtcatg gatcgcctga tgcaggcgct gggactaccg
     1921 ggtaaatcct tcgtgccgct gattgtcggc ttcggctgta acgtaccttc cgtgatgggc
     1981 gcccgcacgc ttgacgctcc gcgcgaacgc ctgatgacca tcatgatggc gccgt
//
LOCUS       DAGWFR010000342         2026 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.345, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000342 DAGWFR010000000
VERSION     DAGWFR010000342.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2026)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2026)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2026
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.345"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..236
                     /locus_tag="MOX77_004700"
     CDS             <1..236
                     /locus_tag="MOX77_004700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HCA3360066.1"
                     /translation="SQIGRALTNKKSDDRDAIAAVCELIAEVGQSKRLADAGAKPEHY
                     SAWAQAALEDICLRSNPRTATQAQIIDLYAAAG"
     gene            355..1581
                     /gene="eutH"
                     /locus_tag="MOX77_004701"
     CDS             355..1581
                     /gene="eutH"
                     /locus_tag="MOX77_004701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization protein EutH"
                     /protein_id="HCA3360067.1"
                     /translation="MGINEIIMYIMMFFMLIAAVDRILSQFGGSARFLGKFGKSIEES
                     GGQFEEGFMAMGALGLAMVGMTALAPVLAHVLGPVIIPVYEMLGANPSMFAGTLLACD
                     MGGFFLAKELAGGDVAAWLYSGLILGSMMGPTIVFSIPVALGIIEPSDRRYLALGVLA
                     GIVTIPIGCIAGGLIAMYSGVQINGQPVEFTFALILMNMIPVLIVAVLVALGLKFIPE
                     KMINGFQIFAKFLVALITIGLAAAVVKFLLGWELIPGLDPIFMAPGDKPGEVMRAIEV
                     IGSISCVLLGAYPMVLLLTRWFEKPLMNVGKLLNVNNIAAAGMVATLANNIPMFGMMK
                     QMDTRGKVINCAFAVSAAFALVDHLGFAAANMNAMIFPMIVGKLIGGVTAIGVAMMLV
                     PKDDAAQVKTEAEAQS"
     gene            1578..>2026
                     /locus_tag="MOX77_004702"
     CDS             1578..>2026
                     /locus_tag="MOX77_004702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine ammonia-lyase reactivating factor
                     EutA"
                     /protein_id="HCA3360068.1"
                     /translation="MNTRQLLSVGIDIGTTTTQVIFSRLELVNRAAVSQVPRYEFIKR
                     DISWQSPVFFTPVDKQGGLKEAELKALILAQYQAAGIAPESVDSGAIIITGESAKTRN
                     ARPAVMALSQSLGDFVVASAGPHLESVIAGYGAGAQSLSEQRMCRVL"
BASE COUNT          403 a          530 c          646 g          447 t
ORIGIN      
        1 tcagtcaaat cggtcgggcg ttaaccaata agaaatcgga cgatcgcgat gcgattgcgg
       61 cggtgtgcga gctgattgcc gaagtggggc agagcaaacg gctggctgac gctggcgcca
      121 aacccgaaca ctacagcgcg tgggcgcaag ccgcgctgga ggatatttgt ctgcgcagta
      181 acccacgcac cgccacacag gcacagatta tcgacctgta cgcggctgcc gggtaatgct
      241 gtaggccgga taaggtgctc gcatcgccat ccggcaataa cacggcgtta atgccggagg
      301 cgacgtaaac gtcttatccg gcttacaaat caaaaatgac agggagtagg ggctatggga
      361 attaacgaaa tcatcatgta catcatgatg ttctttatgc tgattgccgc cgtggacagg
      421 atcctgtcgc agttcggcgg gtcggcgcgc ttcctcggta aatttggcaa gagtatcgag
      481 gagtctggcg gccagtttga agagggcttt atggcgatgg gcgcgttggg actggcgatg
      541 gttggtatga ccgcgctggc gccggtgctg gcgcatgtac tggggccggt tattatcccg
      601 gtatacgaaa tgctgggcgc gaacccatcc atgttcgcgg gtacgctact ggcttgtgat
      661 atgggcggat tcttcctcgc caaagagctg gccggcggtg atgtcgcggc gtggctatac
      721 tcagggttaa tacttgggtc gatgatgggg ccgaccattg tgttctccat tccggtggcg
      781 ctcggcatta tcgaaccgtc tgaccgccgc tacctggcgc ttggcgtact ggcgggtatc
      841 gtcaccattc ccattggctg cattgcgggg gggttgatcg ccatgtactc aggtgtgcag
      901 atcaatggtc agccagtgga gtttaccttc gcgctgatcc tgatgaacat gatcccggta
      961 ttgatcgtcg cggtgctggt agcgctgggg ctgaagttca tcccggaaaa aatgatcaac
     1021 ggtttccaga ttttcgccaa atttctggtg gcgctgatca ccatcggtct ggcggctgcg
     1081 gtggttaaat tcctgttggg ctgggagttg attccggggc tcgacccgat ctttatggcg
     1141 ccaggcgaca aacccggcga agtgatgcgc gccattgaag tgatcggctc tatctcctgc
     1201 gtgctgctcg gcgcgtatcc gatggtgctg ttactgaccc gctggtttga aaaaccgttg
     1261 atgaatgtcg gtaagctgct gaacgtaaat aatattgcgg cggcaggcat ggtagcgacc
     1321 ctggcgaaca atatccccat gttcggcatg atgaagcaga tggatacccg cggcaaagtg
     1381 attaactgcg catttgccgt ctctgcggcg ttcgcgctgg tcgaccattt aggcttcgcc
     1441 gctgccaaca tgaacgccat gatcttcccg atgattgtcg gcaagctgat cggcggcgtg
     1501 acggcgattg gcgtggcgat gatgctggtg ccgaaagatg acgccgccca ggtgaaaacc
     1561 gaagcggagg cgcaatcgtg aacactcgcc agctactgag cgtcggtatc gatatcggca
     1621 ccaccaccac gcaggtgatc ttctcgcgcc tggagttggt taaccgtgcg gcggtgtcgc
     1681 aggtgccgcg ctacgaattc atcaaacgcg acattagctg gcaaagcccg gtcttcttta
     1741 cgcccgtgga taagcagggc ggtctgaaag aggcagaact taaagcgctg attctggctc
     1801 agtatcaggc cgcaggcatc gcgcctgaat cggtggactc aggggctatc attatcaccg
     1861 gcgaaagcgc caaaacccgc aacgcccgtc cggcggtcat ggcgctctcg cagtcgctgg
     1921 gcgactttgt ggtcgccagc gccgggccgc atctggaatc ggtcattgcc ggttacggcg
     1981 ccggggcgca aagcctgtct gagcagcgga tgtgccgggt gctgaa
//
LOCUS       DAGWFR010000343         1996 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.346, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000343 DAGWFR010000000
VERSION     DAGWFR010000343.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1996)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1996)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1996
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.346"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..1281)
                     /locus_tag="MOX77_004703"
     CDS             complement(<1..1281)
                     /locus_tag="MOX77_004703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HCA3360069.1"
                     /translation="MSNETGHLNRRSFLKGIVALGTVAALPGGLLTSRCALAQPPVPF
                     NPKTYKIYRNACPRNCYDTCSLKTWVKDGVITFVEGAPESTFTHGTPYVKGLSYPRRV
                     YSPDRIKYPMAQDVRGSGNWRRISWEEAMQRIAAKMLEIKKKDSSMLGLALTKYSGKF
                     GVLNYAVEGMMSSLGYTTRFAGTPCWPAGIDAQNYDMGDMWCNDPEDMVKAKYIIIWG
                     ANPAWCSMHSMKYIYQAREKGAKVVVIDPLLSQTAAKADLYLRVRPGSDGALALGMAR
                     HLVDKGLVDQDFVNNDAHGYPEFEAYLRNHVTVEWAAEICGLSAQVIRQLAEEFTAVN
                     PATAWIGYGMQRHVNGGANVRAIDAFVAMSGNIGVEGGGARYGHLHTWGFNYNAMLQK
                     PPVGAIGIPGAAGTTSEFGAAAGSDAVQYSDRSLN"
     gene            complement(1352..1834)
                     /locus_tag="MOX77_004704"
     CDS             complement(1352..1834)
                     /locus_tag="MOX77_004704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000377432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone"
                     /protein_id="HCA3360070.1"
                     /translation="MDSIYESLTELEKTGLTLRDFFNSHDSHSLKSAYVRLNPSAAVN
                     LTDRAWLEAEYDFNALFVGPGKLLAAPFASVYLEEDALVMGKATLEIRDFMAALGLSV
                     NQESNIPDDHISCVLELTTLLLANTRQTSQYCSTLTQYINNYLTKWVPLYIEKIKTHA
                     "
BASE COUNT          512 a          537 c          467 g          480 t
ORIGIN      
        1 attcagagag cgatcggagt actgcacggc gtcgctgcca gcggcagccc cgaattcact
       61 ggtggtgccc gccgctcccg gtatgccaat agcgcccacc ggcggcttct gcagcatggc
      121 gttatagtta aagccccagg tatgcagatg gccataacgc gcgccgccgc cttcgacacc
      181 gatgttgccg gacatagcga caaaggcatc gatagcgcga acgttggcgc cgccgttgac
      241 atgacgctgc atcccgtaac caatccaggc cgtggccggg ttaaccgccg taaactcttc
      301 cgccagttga cgaatcacct gtgccgacaa cccgcagatt tctgccgccc actccacggt
      361 tacatggtta cgcagatagg cttcaaattc cggatagcca tgagcgtcgt tgttgacaaa
      421 atcctgatcc accaggccct tatccaccag atggcgcgcc atccccagcg ccagcgcgcc
      481 gtctgagcca ggccgtacgc gcaggtagag atcggctttg gcggcagtct gcgacagcag
      541 cgggtcgata accacgacct tcgccccttt ctcgcgcgcc tgatagatat atttcatgga
      601 gtgcattgag caccaggctg ggttcgcgcc ccagataatg atgtattttg ctttcaccat
      661 atcttccggg tcgttacacc acatgtcgcc catgtcgtag ttttgcgcgt caataccggc
      721 aggccagcac ggcgtaccgg caaaacgggt ggtatagcca agcgaggaca tcatcccttc
      781 aacggcatag ttcagcacgc caaacttacc ggaatatttg gtcagcgcca gaccgagcat
      841 agaactgtct tttttcttaa tctccagcat tttggcggca atacgctgca tcgcctcttc
      901 ccatgagatg cgacgccagt tgccgctacc gcgaacgtcc tgcgccatgg gatatttaat
      961 acgatcggga ctataaaccc ggcgcggata gctcaaccct ttgacgtaag gcgtaccgtg
     1021 agtaaatgtt gattccggcg caccttccac gaaagtaatg accccgtcct ttacccacgt
     1081 cttgaggcta caggtgtcat agcagttacg cggacacgcg ttacgataaa ttttgtacgt
     1141 tttagggtta aagggaacag gcggctgcgc aagcgcgcat cgggaggtca gtaatcctcc
     1201 gggtaaagcc gcaacggtgc ccagcgccac tatccccttt aaaaaagaac gtctgttcag
     1261 atgtcccgtc tcattactca tattgatact ctcgttttaa ttcatcaaac caataaaata
     1321 agatgtccgc caccgtatat aacgtggtcg tttatgcatg agtttttatt ttttcgatat
     1381 ataatggcac ccactttgtt aaatagttat tgatatattg agtgagggta gagcagtatt
     1441 gtgacgtttg ccgggtatta gccagtaata gtgtggtcaa ttccagcacg caggaaatat
     1501 gatcgtcagg aatattgctt tcctgattaa ccgataatcc caacgctgcc ataaaatccc
     1561 gtatctccag cgtcgccttt cccatcacca gcgcatcctc ttccagatac actgaagcga
     1621 aaggcgcagc cagcagcttg ccagggccga cgaatagcgc attaaagtca tactccgctt
     1681 ccagccacgc ccggtcggta aggtttaccg cagcagatgg atttaatctc acgtaggcag
     1741 atttcagtga atgactatca tgagaattaa aaaaatcacg caatgtaagc cctgtttttt
     1801 ctaattccgt cagtgattca tagattgaat ccatgaataa ataacctcac atacaaatgc
     1861 aatataaatc aagaaaaaag aatgggcatg ttaacggaag cgcttaatct ttctttgata
     1921 aaaaaacaga aaaattccag ttaaatccgt agaagacttt tttattgttt caaagtttaa
     1981 aaacagaaga ccgttg
//
LOCUS       DAGWFR010000344         1993 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.347, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000344 DAGWFR010000000
VERSION     DAGWFR010000344.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1993)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1993)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1993
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.347"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..226)
                     /locus_tag="MOX77_004705"
     CDS             complement(<1..226)
                     /locus_tag="MOX77_004705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation protein A"
                     /protein_id="HCA3360071.1"
                     /translation="MDTKKIFKHIPQVILGIIGAFCLSVVALRRGEHVSALWIVVASV
                     SVYLVAYRYYSLYIAQKVMKLDPTRATPAVI"
     gene            593..1993
                     /gene="tsr"
                     /locus_tag="MOX77_004706"
                     /pseudo
     CDS             593..1993
                     /gene="tsr"
                     /locus_tag="MOX77_004706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463392.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
BASE COUNT          497 a          467 c          582 g          447 t
ORIGIN      
        1 tgataaccgc cggcgtcgcg cgcgtcgggt cgagtttcat gaccttctgg gcgatgtaca
       61 ggctgtagta gcggtaagcc accagataga cggaaacgga agcgaccacg atccacaggg
      121 cgctcacgtg ttcaccccga cgtagggcaa cgaccgagag gcagaaagca ccgatgattc
      181 cgagaatcac ctggggtatg tgcttgaata tctttttcgt atccatagta aaacctggtt
      241 gtaagtttaa ttatcagccg aagctgggtg gacattgagt tcgtgtttga ggaggtagat
      301 tgactgctat gctgagagga tcttgccaga tcatcgcgcg cgtaaagtta ggtaaatcag
      361 tgagtggttg tatggcggtt taagcggtcg gacgtaccgg taagcggttt cgcggaggag
      421 ggcgtgggct attttatgtg attgagatca cgatataaaa tgggacgatc cttgttgcgc
      481 ggggcgtcat aacgacttca ctgagctaat cgtgatatta atggcgcgca tcccataaag
      541 ttttcccttt ccaggccgaa aattctgtat ctgtctagcg gaaagagaaa acatgttaaa
      601 gcgaattaaa attgttacca gcttactgct ggtattggcg ctatttggcc ttttacaact
      661 gacatccggc gggctgttct tcaactcgct gaagaatgac aaagaaaact tcaccgtatt
      721 gcaaaccatt cgtcagcagc agtctgccct gaatgcaatc tgggtggaac tgttgcaaac
      781 gcgtaatacc ctgaatcgcg cgggtatccg ctggatgatg gaccagagca atattggcag
      841 cggcgcaact gtcgctgaac tgatgcaggg ggcgaccaat acgctgaagc tgaccgaaaa
      901 aaactgggcg cagtatgagg cgttaccgcg cgatccacgt cagagtgagg cggctttcct
      961 tgagatcaaa cgaacctatg atatctacca cgacgcgttg gcggagctta ttcagcttct
     1021 tggcgcgggt aagattaacg agtttttgat caaccgactc aaagctatca ggacgctttt
     1081 gagaagcagt acatggccta tatgcagcaa aacgatcgtc tgtacgatat tgctgttgag
     1141 gataacaaca gttcctacaa ccaggcgatg tgggtactgg tcagtgtgct gattgccgtt
     1201 ctggtggtca ttatcgccgt ctggttcggc atcaaactgt cgcttatcgc cccgatgaat
     1261 cgtctgattg aaagcattcg tcatatcgcc agcggcgatc tggtgaagcg tatcgacgtg
     1321 gaaggctcca acgaaatggg gcagttggct gaaaacctgc gtcatatgca aagtgaactg
     1381 atgcgtaccg ttggcgatgt acgtaacggc gcgaatgcaa tctatagcgg cgccagcgag
     1441 attgcgatgg gcaacaacga tctctcttcc cgtactgagc agcaggcagc gtctctggaa
     1501 gagaccgccg ccagtatgga acaactgacc gccaccgtga aacagaacgc cgaaaacgcc
     1561 cgtcaggcca gccatctggc gctgagtgcg tcagagacag cgcaaaaagg cggcaaagta
     1621 gtggataacg tcgtacaaac aatgcgcgat atcgcctcca gttcgcagaa aatcgccgat
     1681 attatcagcg taatcgacgg tattgctttc cagaccaata ttctggcgct gaatgcggcg
     1741 gtagaagcgg cgcgcgcagg cgagcaggga cgcgggttcg cggtggtggc cggtgaagtc
     1801 cgtaatctgg cccagcgtag cgcgcaggcg gcacgggaga tcaagagtct gattgaggat
     1861 tccgtgagcc gtgttgatgt aggttcgacg ctggtcgaaa gcgccggtga aaccatggat
     1921 gagatcgtca atgcagttac ccgcgtgacc gacattatgg gcgagattgc ctcggcgtct
     1981 gacgagcaaa gcc
//
LOCUS       DAGWFR010000345         1982 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.348, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000345 DAGWFR010000000
VERSION     DAGWFR010000345.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1982)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1982)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1982
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.348"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..>1982)
                     /locus_tag="MOX77_004707"
     CDS             complement(<1..>1982)
                     /locus_tag="MOX77_004707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001237670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain repeat protein"
                     /protein_id="HCA3360072.1"
                     /translation="AAGNSSGVSNSFTFTVDTVPLQPPVVNEILDDVAPVTGPLTDGA
                     FTNDRTLTINGSGENGSTVTIYDNGVAIGTALVTDGVWTFNTSELSEASHALTFSATD
                     DAGNTTAQTQPITITVDITAPPAPTIQTVADDGTRVAGLADPYATVEIHHADGTLVGS
                     AVANGTGEFVVTLSPAQTDGGTLTAIAIDRAGNNGPATNFPASDSGLPAVPAITAIED
                     DVGSIQGNIAAGGATDDTMPTLRGTTDIGSTVEVFIDGDSAGFATVDASGNWIFEIAT
                     PLSESTHYFTVQATNANGPGGLSAPVGITVDLSAPAQPVITSATDDVPGMTGTLDNGA
                     LTNDSRPTLNGTGEAGATIRILDNGVEIGSATVDQSGNWRFTPNTPLESNAHIFTAVA
                     TDPAGNSGQLSDGFTLNIDAQAPDVPVITSVIDDNNQPTVPVLPGQSTDDRQPILNGT
                     GEPGATITIFDNGTPLGTAQVGENGSWTFPVPRNLSEGSHNLTVSATDPAGNTSAVSA
                     PWTIVVDITPPAIPVLTSVVDDQPGITGNLVSGQLTNDATPTLNGRGEAGATINVYLD
                     GNPASIGTTTVNSDGTWSFTPQTPLANGSHTFTLSATDPAGNSSAVSSGFVLTIDTTP
                     PAAPVIASVADNTAPVTGIVPNGGSTNETRPTLSGTG"
BASE COUNT          354 a          568 c          627 g          433 t
ORIGIN      
        1 ccggtacccg agagtgttgg tcgggtttcg ttcgtcgagc cgccgttggg gacgatgccc
       61 gttaccggcg ccgtattatc tgccacgctg gcgataaccg gcgcggcggg cggtgtggtg
      121 tcaatcgtca gcacaaatcc gctggacacc gcgctgctat tacccgccgg atcggtggcg
      181 ctaagggtga acgtgtggct accgtttgca agcggcgtct gcggcgtgaa actccacgtg
      241 ccgtcgctat tcaccgtcgt ggtaccgatg gacgcgggat taccgtcaag atagacatta
      301 atcgtcgcgc ctgcctctcc gcgcccgttc agggtgggcg tcgcatcgtt cgttagctgc
      361 ccgctaacca ggttgccggt aataccgggc tggtcatcca caacggaggt gagaaccggg
      421 atcgccggag gcgtaatatc gaccacgatc gtccacggcg cggagaccgc gctggtattg
      481 cccgccggat cggtagcgct aaccgtcaga ttatggcttc cctctgacaa attgcggggc
      541 accgggaagg tccagctacc gttttcgcct acctgagccg tgccaagcgg cgtaccgtta
      601 tcaaaaatgg tgattgtcgc gccaggttcg ccagttccgt tcagtattgg ctgccgatcg
      661 tcggtggatt gccccggtaa caccgggacg gtcggttgat tgttatcgtc aatcacggag
      721 gtgataaccg gcacatctgg tgcctgcgcg tcaatgttca gcgtaaaacc atccgaaagc
      781 tgaccgctat tgccggcggg atcggtcgcc acggcggtaa agatgtgtgc gttgctctcc
      841 agcggcgtgt tcggggtgaa gcgccagttg ccgctttgat ctaccgtagc ggaaccgatt
      901 tctacgccgt tatccagaat gcggattgtg gcgcctgctt ctcccgttcc gttgagcgtc
      961 gggcgtgaat cattggtgag cgcgccgtta tccagcgtac cggtcatgcc ggggacatca
     1021 tccgttgcgc tggtaataac cggttgtgcc ggcgcgctaa gatcgacagt gatcccgacc
     1081 ggtgcggaca ggccgcccgg gccattcgca ttggttgcct ggacggtgaa gtaatgtgtg
     1141 ctttcgctta atggcgtcgc gatctcaaag atccagttcc cgctggcgtc aacggtggca
     1201 aagcctgccg aatcgccatc aatgaaaact tcaacggtag agccgatatc cgtggtgccg
     1261 cgcagcgtcg gcatggtgtc gtccgtggcg ccgcccgctg caatattccc ctgtatgctc
     1321 ccgacatcat cttcaatcgc cgtgatggcc gggacggcgg gcagaccgct gtcggaagca
     1381 ggaaaattcg tagccgggcc gttattcccc gcgcgatcga tagcaattgc cgtcagcgta
     1441 ccgccatcgg tttgcgccgg actgagcgtg acgacaaatt caccggtgcc attagcgaca
     1501 gcgctgccga ccagggtgcc atcggcatga tgaatttcaa cggtagcgta aggatcggca
     1561 agtccggcga cgcgcgtgcc atcatcggcc accgtctgga tcgttggcgc gggcggggcg
     1621 gtgatatcca cggtaatggt gatcggttgg gtttgcgccg tggtatttcc agcatcgtca
     1681 gtcgcgctga aggttagcgc atggctggct tctgacaatt cggacgtatt gaatgtccag
     1741 accccgtcgg taacgagcgc cgtcccgatt gccacgccat tgtcgtaaat cgtgacggtg
     1801 ctgccgtttt cgccgctgcc gttaatagtc agcgtccgat cgttagtaaa ggcgccatcg
     1861 gttaatggcc cggtcactgg tgcaacatcg tcgaggatct cattgacgac gggcggctgc
     1921 aacggaacgg tgtcgacggt gaaggtaaag ctgttcgata cgccgctgct gtttccggcg
     1981 gc
//
LOCUS       DAGWFR010000346         1977 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.349, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000346 DAGWFR010000000
VERSION     DAGWFR010000346.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1977)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1977)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1977
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.349"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..393
                     /gene="tnpA"
                     /locus_tag="MOX77_004708"
     CDS             <1..393
                     /gene="tnpA"
                     /locus_tag="MOX77_004708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
                     /protein_id="HCA3360073.1"
                     /translation="KYRRQAFYGEKRRAVGSILRKLCEWKNVNILEAECCADHIHMLL
                     EIPPKMSVSGFMGYLKGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTAKIQD
                     YIKHQLEEDKMGEQLSIPYPSSPFTGRK"
     gene            complement(501..839)
                     /gene="maoP"
                     /locus_tag="MOX77_004709"
     CDS             complement(501..839)
                     /gene="maoP"
                     /locus_tag="MOX77_004709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="macrodomain Ori organization protein MaoP"
                     /protein_id="HCA3360074.1"
                     /translation="MAESFTTTNRYFDNKHYPRGFSRHGDFTIKEAQLLERHGHAFND
                     LDLGKREPVTEEEKLFVAVCRGEREPVTDAERVWSKYMTRIKRPKRFHTLSGGKPQVE
                     GAEDYTEADD"
     gene            946..1794
                     /gene="hdfR"
                     /locus_tag="MOX77_004710"
     CDS             946..1794
                     /gene="hdfR"
                     /locus_tag="MOX77_004710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462788.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator HdfR"
                     /protein_id="HCA3360075.1"
                     /translation="MESTVDTELLKTFLEVSRTRHFGRAAEALYLTQSAVSFRIRQLE
                     NQLGVNLFTRHRNNIRLTTAGEKLLPYAETLMNTWQAARKEVAHTSRHNEFSIGASAS
                     LWECMLNAWLGRLYQLQEPQSGLQFEARIAQRQSLVKQLHERQLDLLITTEAPKMDEF
                     SSQLLGHFTLALYCSSPARKKSELNYLRLEWGPDFQQHETGLIAADEVPVLTTSSAEL
                     ARQQLSALNGCSWLPVNWANEKGGLHTVADSATLSRPLYAIWLQNSDKYSLICDLLKT
                     DVLDEQ"
     gene            complement(1896..1971)
                     /locus_tag="MOX77_004711"
     tRNA            complement(1896..1971)
                     /locus_tag="MOX77_004711"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1936..1938),aa:Trp,seq:cca)
BASE COUNT          558 a          453 c          504 g          462 t
ORIGIN      
        1 aaataccgaa gacaggcgtt ctacggagag aagcgtagag cggtaggcag cattttaagg
       61 aaactatgtg agtggaaaaa tgtgaacatt ctggaagcgg aatgctgtgc agatcatatc
      121 catatgcttc tggagatccc gccgaagatg agcgtgtcag ggtttatggg ttatctgaag
      181 ggaaaaagta gcctgatgct ttatgagcag tttggcgatt tgaaattcaa atacaggaac
      241 agggagttct ggtgcagagg gtactacgtc gatacggtgg gtaagaacac ggcgaagata
      301 caggattaca taaagcacca gcttgaagag gataaaatgg gtgagcagtt atcgatccct
      361 tatcctagca gcccgtttac gggccgtaag taacgaagtt tgatgcaaat gtcagatcgt
      421 atgcgcctgt tagggcgcgg ctggtaagag agccttacag gcgcatcaga aaaacctccg
      481 gctatgccgg aggatattta ttaatcatca gcttcggtgt agtcttctgc gccttcaact
      541 tgcggcttgc cgccagacaa ggtgtggaag cgttttggac gcttgatacg cgtcatatac
      601 ttggaccaga cgcgttctgc atccgttacc ggctcgcgtt caccgcgaca taccgctaca
      661 aacagcttct cttcttcagt cacaggctca cgcttgccaa gatccagatc attaaaggca
      721 tgaccatgac gctcaagcag ttgtgcctct ttaatcgtga aatcaccgtg acgagagaat
      781 ccacgtggat aatgtttatt gtcaaaatat cgattagtcg tcgtaaagct ttccgccatc
      841 ctgcacgctc ctaattcttt gtctgagcta tttatggcgc ggagtattag ttacgcttga
      901 cagagtgtaa aacaaaacat ttaaatcata acgacaaata attttgtgga gagcacagtg
      961 gatacggaat tgttaaaaac tttcctggaa gttagccgga cacgccattt cgggcgggcc
     1021 gcagaagcac tttacctgac gcaatccgcg gtgagctttc gtatcaggca actggagaat
     1081 caactgggcg taaacctttt tacgcggcac agaaacaata tccgtttaac cacggctggc
     1141 gaaaaacttt taccgtatgc ggaaacgctg atgaatacgt ggcaggcggc acgtaaagag
     1201 gtggcgcata cctcacgcca taacgagttt tccatcggcg ccagcgcgtc tttatgggag
     1261 tgtatgctta acgcctggct gggtcgactg taccaactac aggagccgca aagcggcctg
     1321 cagttcgaag ccagaatcgc tcaacggcaa tcgcttgtga agcaacttca tgaacgccag
     1381 cttgatctcc tcattactac cgaagcgccc aaaatggatg agttcagcag tcagctgtta
     1441 gggcacttca ctttggcgtt atattgcagc agccctgccc gtaagaaatc agaactcaat
     1501 tatctgcggc tggagtgggg accagacttc caacagcatg aaacagggct gatcgcagca
     1561 gatgaagtac cggtattaac aaccagctca gccgaactcg cccgacagca gcttagcgca
     1621 ttaaatggct gtagctggct tcctgtaaac tgggcaaatg aaaagggcgg attacatacc
     1681 gttgccgaca gcgcaacgct ttcacggccg ctatacgcca tttggctgca aaacagcgat
     1741 aaatactcgc tgatctgcga tctgttaaaa acggatgtgc tggatgaaca atgaaaatga
     1801 tgaaaagaaa aagaagggaa cttacgatta cctgatcaga taatcaggta atttcaggca
     1861 aaaaaaaatc cttagcagat gctaaggatt atttctggca ggggcggaga gactcgaact
     1921 cccaacaccc ggttttggag accggtgctc taccaattga actacgcccc taattag
//
LOCUS       DAGWFR010000347         1947 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.350, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000347 DAGWFR010000000
VERSION     DAGWFR010000347.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1947)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1947)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1947
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.350"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            32..>1947
                     /gene="carB"
                     /locus_tag="MOX77_004712"
     CDS             32..>1947
                     /gene="carB"
                     /locus_tag="MOX77_004712"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HCA3360076.1"
                     /translation="MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRV
                     ILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALEL
                     ERQGVLEEFGVTMIGATADAIDKAEDRRRFDIAMKKIGLDTARSGIAHTMEEALAVAA
                     DVGFPCIIRPSFTMGGTGGGIAYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEM
                     EVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIG
                     VETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDE
                     LMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQ
                     ESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVD
                     GVFNLTNIDRWFLVQIEELVRLEEKVTEVGITGLNADFLRQLKRKGFADARLAKLAGV
                     REGEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEDECEANPSVDRDKIMVLG
                     GGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLE
                     DVLEIVRIEKPKGV"
BASE COUNT          453 a          560 c          559 g          375 t
ORIGIN      
        1 ttcttcagca aaataatcag gagccaacaa aatgccaaaa cgtacagata taaaaagcat
       61 cctgattctg ggcgcgggcc cgattgttat cggtcaggcg tgtgagtttg actactccgg
      121 cgctcaggcg tgtaaagcgc tgcgcgaaga aggctaccgc gttattctgg tgaactctaa
      181 cccggccacc atcatgaccg acccggaaat ggccgatgcc acctacatcg agccgattca
      241 ctgggaagtg gtgcgcaaaa tcatcgaaaa agagcgtccg gatgcggtgc tgccgaccat
      301 gggcggccag accgcgctga actgcgcgct ggagttggag cggcagggcg tgctcgaaga
      361 gttcggcgtc accatgattg gcgccaccgc cgacgccatt gataaagccg aagaccgtcg
      421 tcgcttcgat atcgccatga agaaaattgg tctcgacacc gcgcgttccg gtatcgcgca
      481 caccatggaa gaagcgctgg cggttgccgc tgacgtgggc ttcccgtgca tcatccggcc
      541 tagctttacc atgggcggca ccggcggcgg tatcgcttac aaccgtgaag agttcgaaga
      601 aatctgcgaa cgcggtctgg atctctcgcc aaccaacgaa ttgctgattg atgaatcgct
      661 gatcggctgg aaagagtacg agatggaagt ggtgcgtgat aaaaacgaca actgcatcat
      721 cgtctgctct atcgaaaatt tcgatgcgat gggtatccat actggggact cgatcaccgt
      781 ggcgcccgcc cagactctga ccgacaaaga atatcaaatc atgcgtaacg cctcgatggc
      841 ggtactgcgt gaaatcggcg tcgaaaccgg cggttctaac gtccagttcg cagtgaaccc
      901 gaaaaacggt cgtctgatcg ttatcgaaat gaacccgcgc gtctcccgct cctcggcgct
      961 ggcgtcgaaa gccaccggtt tcccgattgc caaagtggcc gccaaactgg cggtaggtta
     1021 cacccttgac gaactgatga acgacatcac cggcgggcgt actccggcct ccttcgagcc
     1081 gtccatcgac tacgttgtga ccaaaattcc gcgctttaac ttcgagaaat tcgccggtgc
     1141 caacgaccgt ctgaccaccc agatgaaatc ggtcggagaa gtgatggcga ttggccgcac
     1201 gcagcaggaa tccctgcaaa aagcgctgcg cggcctggaa gtcggcgcca ccggcttcga
     1261 cccgaaagtc agcctcgacg acccggaagc gctgaccaaa atccgccgcg agctgaaaga
     1321 tgcgggcgca gatcgtatct ggtatatcgc cgatgccttc cgcgcaggcc tctccgtcga
     1381 cggcgtgttc aacctgacca acatcgaccg ctggttcctg gtgcaaattg aagagctggt
     1441 gcgtctggaa gagaaagtaa ctgaagtcgg gattactggc ctcaacgccg acttcctgcg
     1501 tcagctcaag cgtaaaggtt ttgccgatgc gcgtctggca aaattggcgg gcgtgcgcga
     1561 gggggaaatc cgtaagctgc gcgaccagta tgacctgcac ccggtctaca agcgtgtgga
     1621 tacctgcgcg gcggaattcg ccaccgacac cgcctatatg tactccactt atgaagatga
     1681 gtgcgaagcg aacccgtccg ttgaccgcga taaaatcatg gtcctcggcg gcggcccgaa
     1741 ccgtatcggc cagggcattg agtttgacta ctgctgcgta cacgcctcgc tggcgctgcg
     1801 cgaagacggt tacgagacca tcatggtcaa ctgtaacccg gaaaccgtct ctaccgacta
     1861 cgacacttcc gaccgcctgt acttcgagcc ggtgacgctg gaagacgtgc tggaaatcgt
     1921 gcgtatcgag aagccgaaag gcgttat
//
LOCUS       DAGWFR010000348         1920 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.352, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000348 DAGWFR010000000
VERSION     DAGWFR010000348.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1920)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1920)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1920
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.352"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..452
                     /locus_tag="MOX77_004713"
     CDS             <1..452
                     /locus_tag="MOX77_004713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ethanolamine ammonia-lyase reactivating factor
                     EutA"
                     /protein_id="HCA3360077.1"
                     /translation="TLSLSGSTIWLEDVQLPLRNLPVAIPQDDADLVNAWRQALLQLD
                     LDPQTDAYVLALPSTLPVRYAALLTVINALTAFVARYPNPHPLLVVAEQDFGKALGML
                     LRPQLPQLPLAVIDEVVVRAGDYIDIGTPLFGGSVVPVTVKSLAFPS"
     gene            464..1825
                     /gene="eutB"
                     /locus_tag="MOX77_004714"
     CDS             464..1825
                     /gene="eutB"
                     /locus_tag="MOX77_004714"
                     /EC_number="4.3.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine ammonia-lyase subunit alpha"
                     /protein_id="HCA3360078.1"
                     /translation="MKLKTTLFGNVYQFKDVKEVLAKANELRSGDVLAGVAAASSQER
                     VAAKQVLSEMTVADIRNNPVIAYEEDCVTRLIQDDVNETAYNRIKNWSISELREYVLS
                     DETSVDDIAFTRKGLTSEVVAAVAKICSNADLIYGGKKMPVIKKANTTIGIPGTFSCR
                     LQPNDTRDDVQSIAAQIYEGLSFGAGDAVIGVNPVTDDVENLTRVLDTVYGVIDKFNI
                     PTQGCVLAHVTTQIEAIRRGAPGGLIFQSICGSEKGLKEFGVELAMLDEARAVGAEFN
                     RIAGENCLYFETGQGSALSAGANFGADQVTMEARNYGLARYYDPFLVNTVVGFIGPEY
                     LYNDRQIIRAGLEDHFMGKLSGISMGCDCCYTNHADADQNLNENLMILLATAGCNYIM
                     GMPLGDDIMLNYQTTAFHDTATVRQLLNLRPSPEFERWLETMGIMANGRLTKRAGDPS
                     LFF"
     gene            1844..>1920
                     /locus_tag="MOX77_004715"
     CDS             1844..>1920
                     /locus_tag="MOX77_004715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine ammonia-lyase"
                     /protein_id="HCA3360079.1"
                     /translation="MDQKQIEEIVRSVMASMGQDVPQPVA"
BASE COUNT          423 a          527 c          568 g          402 t
ORIGIN      
        1 atacgctctc gctttccggc agtactatct ggctggaaga cgtccaactg ccgctgcgca
       61 acctgccggt ggcgatcccg caggatgacg ccgatttggt gaacgcctgg cggcaggcgc
      121 ttctccagct tgatctcgac ccgcaaaccg acgcttacgt gctggcgctt ccctccacgc
      181 ttccggtgcg ttacgccgca ttactcacgg tcatcaacgc gctgacggct tttgtcgcgc
      241 gttatcccaa tccacatccc ctgctggtgg tggccgagca ggattttggt aaagcgctgg
      301 gcatgttatt gcgcccacag ttaccgcaac ttccgctggc ggtcatcgat gaggtggtcg
      361 tgcgggcggg agactatatc gacattggta cgcctctttt tggcggatcg gttgtgccgg
      421 tgacggtgaa atcactcgca tttccttcct gagggaacga cttatgaaac taaagaccac
      481 attgttcggc aatgtttatc agtttaagga tgtaaaagag gtactggcta aagccaacga
      541 actgcgttcg ggggatgtgc tggccggggt tgccgcggca agttcgcagg agcgcgtagc
      601 ggcaaaacag gtactgtcgg aaatgacggt ggcggatatc cgcaacaatc cggtgattgc
      661 ctatgaagag gactgcgtga cgcgcctgat tcaggatgac gtcaacgaaa cggcctataa
      721 tcggattaaa aactggagca tcagcgaact gcgcgaatac gtactgagcg atgaaacctc
      781 cgtggacgac atcgcgttta cccgcaaagg cctgacctcc gaagtggtgg cggcagtggc
      841 gaaaatctgc tccaacgccg acctgatcta cggcggtaag aaaatgccgg tgatcaaaaa
      901 agccaatacc accatcggta ttccgggcac ctttagctgc cgtttgcagc cgaacgatac
      961 ccgtgacgat gtgcagagta tcgccgcgca aatctacgaa gggctttctt tcggcgcagg
     1021 cgatgcggtg atcggcgtta acccggtgac cgatgacgtg gagaacctga cccgcgtgct
     1081 cgacaccgtt tacggcgtta tcgataaatt caatattccg acccagggct gcgtgctggc
     1141 gcacgtcacc acccagattg aagcgattcg tcgcggcgcg ccaggcggac tgattttcca
     1201 gagcatttgc ggcagcgaga agggcttaaa agagttcggt gtcgagctgg caatgctcga
     1261 cgaagcgcgg gcagtggggg cggagttcaa ccgcatcgcc ggggaaaact gcctgtactt
     1321 tgaaaccgga cagggctcgg cgctgtcggc tggtgcgaac tttggtgccg accaggtgac
     1381 gatggaagcg cgtaactacg ggctggctcg ctactacgat ccgttcctgg tgaacaccgt
     1441 ggtgggcttt atcgggccgg agtatctcta caacgacagg cagattatcc gcgccggtct
     1501 cgaagatcac tttatgggca agctgagcgg catctcgatg ggctgcgact gctgctatac
     1561 caaccatgcc gacgccgacc agaaccttaa cgaaaacctg atgattctgc tcgccactgc
     1621 cggctgtaac tacatcatgg ggatgccgct cggcgacgac atcatgctca actaccagac
     1681 taccgctttc cacgataccg ccaccgtccg tcagttgctg aatttacggc cgtcgccgga
     1741 gtttgaacgc tggctggaaa cgatgggcat tatggcaaac ggtcgtctga ccaaacgggc
     1801 gggcgatccg tcactgttct tctgatgacg cggggataac accatggatc aaaaacagat
     1861 tgaagaaatt gtacgtagcg tgatggcgtc aatgggacag gacgtaccgc agcccgtcgc
//
LOCUS       DAGWFR010000349         1902 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.354, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000349 DAGWFR010000000
VERSION     DAGWFR010000349.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1902)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1902)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1902
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.354"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..1468)
                     /gene="emrB"
                     /locus_tag="MOX77_004716"
     CDS             complement(<1..1468)
                     /gene="emrB"
                     /locus_tag="MOX77_004716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter permease
                     subunit EmrB"
                     /protein_id="HCA3360080.1"
                     /translation="MQQQKPLEGAQLIIMTIALSLATFMQVLDSTIANVAIPTIAGNL
                     GSSLSQGTWVITSFGVANAISIPLTGWLAKRFGEVKLFMWSTVAFAAASWACGVSSSL
                     NMLIFFRVVQGVVAGPLIPLSQSLLLNNYPPAKRSIALALWSMTVIVAPICGPILGGY
                     ISDNYHWGWIFFINVPIGIAVVLMTLHTLRGRETHTERRRIDAVGLALLVIGISSLQI
                     MLDRGKELDWFSSQEIIILTVVAVIAISFLIVWELTDDHPIVDLSLFKSRNFTIGCLC
                     ISLAYMLYFGAIVLLPQLLQEVYGYTATWAGLASAPVGIIPVILSPIIGRFAHKLDMR
                     RLVTFSFIMYAVCFYWRAWTFEPGMDFGASAWPQFIQGFAVACFFMPLTTITLSGLPP
                     ERLAAASSLSNFTRTLAGSIGTSITTTMWTDRESLHHAQLTESVTAYNPNAQAMYDKL
                     EGLGMTHQQASGWIAQQITNQGLIISANEIFWMSAGIFL"
     gene            complement(1485..>1902)
                     /locus_tag="MOX77_004717"
     CDS             complement(1485..>1902)
                     /locus_tag="MOX77_004717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HCA3360081.1"
                     /translation="WVDANFKETQLANMRIGQPVTIITDIYGDDVKYTGKVVGLDMGT
                     GSAFSLLPAQNATGNWIKVVQRLPVRVELDARQLEQHPLRIGLSTLVTVDTANRDGQV
                     LASQVRTTPVAESNAREINLAPVNKLIDDIVQANAG"
BASE COUNT          457 a          528 c          532 g          385 t
ORIGIN      
        1 ccaggaagat ccccgccgac atccagaaga tttcgttggc ggaaataatc agcccctgat
       61 tcgtgatttg ctgggctatc cagcctgacg cctgttggtg cgtcatccct aagccttcca
      121 gtttatcgta catagcctga gcgtttggat tatacgccgt aaccgactcg gtgagctgcg
      181 catggtgtag cgactcacga tcggtccaca tagtggtggt aatcgaggtg ccaatggagc
      241 ccgccagcgt tcgcgtgaag ttcgacaggc ttgatgccgc cgccagccgt tcgggcggta
      301 acccggagag cgtaatggtg gtcagcggca taaagaagca ggcgacggca aatccttgaa
      361 taaactgcgg ccatgcggaa gcgccgaaat ccatacccgg ttcgaacgtc caggcgcgcc
      421 agtaaaaaca gacggcgtac ataatgaagc tgaatgtgac cagcctgcgc atatccagtt
      481 tatgcgcgaa gcgtccgata atcggcgaca aaattaccgg aataataccg actggcgccg
      541 acgccagacc tgcccacgtt gcggtatagc cgtacacctc ttgcaaaagc tgcggcaata
      601 gaacaatggc gccgaaatag agcatatagg caaggctgat gcacaggcag ccaatagtga
      661 agttacgcga tttaaaaaga gaaagatcga cgatagggtg atcgtcggtc agttcccaga
      721 cgatcaggaa actgatggcg atgacggcga ccacggtcag gatgataatt tcctgcgagg
      781 agaaccagtc cagctcttta ccgcggtcga gcataatttg caggctgctg atgccaatca
      841 ccagtaacgc cagcccgacg gcgtcaatac gtcgccgttc ggtatgagtt tcacgtccgc
      901 gcagcgtgtg taacgtcatc aggacgacgg cgatgccaat cggcacgttg atgaagaaaa
      961 tccatcccca gtggtaatta tcactgatgt agccccccag aatcgggccg caaatcggcg
     1021 cgacaatgac ggtcattgac cagagcgcca gcgcaatgga gcgctttgca ggcggatagt
     1081 tattcagcaa caggctttgc gagagcggaa tcagcggccc ggcgaccacg ccctgcacca
     1141 cgcggaagaa gatcagcatg ttcaggctgc tggatacgcc acaggcccag gaggccgcgg
     1201 caaaggcgac cgtcgaccac atgaacagtt tgacttcgcc aaaacgcttc gccagccagc
     1261 cggttaaggg aatcgagata gcgttcgcca ccccgaaaga ggtgataacc catgtcccct
     1321 ggcttaggga agaacccagg ttcccggcga tggtcggaat cgccacgttg gcaatggtgg
     1381 agtccagcac ctgcatgaat gtcgccagcg acagcgcgat cgtcatgatg atgagctgcg
     1441 cgccttccag cggtttttgc tgttgcatca cacgcacctc aggattaacc cgcgttagcc
     1501 tgtacgatgt cgtcgatcag tttattgacc ggcgcgagat taatttcgcg tgcgttactt
     1561 tcggcaaccg gcgtcgttcg tacctggctg gccagtacct gaccgtcgcg attagcggta
     1621 tccacggtga ccagcgtcga taaaccaatg cgcagcggat gttgttctaa ctggcgggcg
     1681 tccagttcga cgcgtaccgg cagacgttga accactttaa tccagttacc cgtcgcattt
     1741 tgcgcgggca gcagggagaa ggcgctacct gtccccatat ccagaccgac gactttaccg
     1801 gtgtatttta cgtcgtcgcc ataaatgtca gtaataatcg tcactggctg cccaatgcgc
     1861 atattcgcta attgggtctc tttaaagtta gcgtccaccc ac
//
LOCUS       DAGWFR010000350         1845 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.356, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000350 DAGWFR010000000
VERSION     DAGWFR010000350.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1845)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1845)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1845
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.356"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(66..413)
                     /locus_tag="MOX77_004718"
     CDS             complement(66..413)
                     /locus_tag="MOX77_004718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000679427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quaternary ammonium compound efflux SMR
                     transporter QacE delta 1"
                     /protein_id="HCA3360082.1"
                     /translation="MKGWLFLVIAIVGEVIATSALKSSEGFTKLAPSAVVIIGYGIAF
                     YFLSLVLKSIPVGVAYAVWSGLGVVIITAIAWLLHGQKLDAWGFVGMGLIIAAFLLAR
                     SPSWKSLRRPTPW"
     gene            complement(643..1116)
                     /locus_tag="MOX77_004719"
     CDS             complement(643..1116)
                     /locus_tag="MOX77_004719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001389366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimethoprim-resistant dihydrofolate reductase
                     DfrA7"
                     /protein_id="HCA3360083.1"
                     /translation="MKISLISATSENGVIGNGPDIPWSAKGEQLLFKALTYNQWLLVG
                     RKTFDSMGVLPNRKYAVVSRKGISSSNENVLVFPSIEIALQELSKITDHLYVSGGGQI
                     YNSLIEKADIIHLSTVHVEVEGDINFPKIPENFNLVFEQFFLSNINYTYQIWKKG"
     gene            1274..>1845
                     /gene="intI1"
                     /locus_tag="MOX77_004720"
     CDS             1274..>1845
                     /gene="intI1"
                     /locus_tag="MOX77_004720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 integron integrase IntI1"
                     /protein_id="HCA3360084.1"
                     /translation="MKTATAPLPPLRSVKVLDQLRERIRYLHYSLRTEQAYVHWVRAF
                     IRFHGVRHPATLGSSEVEAFLSWLANERKVSVSTHRQALAALLFFYGKVLCTDLPWLQ
                     EIGRPRPSRRLPVVLTPDEVVRILGFLEGEHRLFAQLLYGTGMRISEGLQLRVKDLDF
                     DHGTIIVREGKGSKDRALMLPESLAPSLRE"
BASE COUNT          489 a          449 c          445 g          462 t
ORIGIN      
        1 ggggtctagc cgccggctct catcgaagaa ggagtcctcg gtgagattca gaatgccgaa
       61 caccgtcacc atggcgtcgg cctccgcagc gacttccacg atggggatcg ggcgagcaaa
      121 aaggcagcaa ttatgagccc catacctaca aagccccacg catcaagctt ttgcccatga
      181 agcaaccagg caatggctgt aattatgacg acgccgagtc ccgaccagac tgcataagca
      241 acaccgacag ggatggattt cagaaccaga gaaagaaaat aaaatgcgat gccataaccg
      301 attatgacaa cggcggaagg ggcaagctta gtaaagccct cgctagattt taatgcggat
      361 gttgcgatta cttcgccaac tattgcgata acaagaaaaa gccagccttt catgatatat
      421 ctcccaattt gtgtagggct tattatgcac gcttaaaaat aataaaagca gacttgacct
      481 gatagtttgg ctgtgagcaa ttatgtgctt agtgcatcta acgccgagtt cagcggcagt
      541 ttttaagttg tggttttatg gaatactttt gcgcagcaaa accataaaac cgcgacttaa
      601 aaactgtcca aggagcgcag cgactggtgc tggaacgact tgttagcctt ttttccaaat
      661 ctgatatgtg taatttatat tagacaaaaa aaactgctca aaaaccaaat tgaaattctc
      721 tggaatttta ggaaaattga tatcaccttc aacctcaacg tgaacagtag acaaatgaat
      781 tatatctgct ttttcaataa gactattgta gatttgaccg ccaccagaga catataaatg
      841 atctgtaatt ttcgatagtt cttgcaaagc gatttctatt gaaggaaaga ctaatacatt
      901 ttcatttgag cttgaaattc ctttcctcga cactactgca tattttcgat ttggaagaac
      961 acccatagag tcaaatgttt tccttccaac aaggagccac tgattatatg tgagcgcttt
     1021 aaagagtaac tgctcacctt ttgctgacca tgggatatca gggccattac cgattacgcc
     1081 attttctgac gttgcagaaa tcaatgaaat tttcaattca acccccgtaa tggctaactt
     1141 tgttttaggg cgactgccct gctgcgtaac atcgttgctg ctccataaca tcaaacatcg
     1201 acccacggcg taacgcgctt gctgcttgga tgcccgaggc atagactgta caaaaaaaca
     1261 gtcataacaa gccatgaaaa ccgccactgc gccgttacca ccgctgcgtt cggtcaaggt
     1321 tctggaccag ttgcgtgagc gcatacgcta cttgcattac agcttacgaa ccgaacaggc
     1381 ttatgtccac tgggttcgtg ccttcatccg tttccacggt gtgcgtcacc cggcaacctt
     1441 gggcagcagc gaagtcgagg catttctgtc ctggctggcg aacgagcgca aggtttcggt
     1501 ctccacgcat cgtcaggcat tggcggcctt gctgttcttc tacggcaagg tgctgtgcac
     1561 ggatctgccc tggcttcagg agatcggaag acctcggccg tcgcggcgct tgccggtggt
     1621 gctgaccccg gatgaagtgg ttcgcatcct cggttttctg gaaggcgagc atcgtttgtt
     1681 cgcccagctt ctgtatggaa cgggcatgcg gatcagtgag ggtttgcaac tgcgggtcaa
     1741 ggatctggat ttcgatcacg gcacgatcat cgtgcgggag ggcaagggct ccaaggatcg
     1801 ggccttgatg ttacccgaga gcttggcacc cagcctgcgc gagca
//
LOCUS       DAGWFR010000351         1842 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.357, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000351 DAGWFR010000000
VERSION     DAGWFR010000351.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1842)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1842)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1842
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.357"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..271)
                     /locus_tag="MOX77_004721"
     CDS             complement(<1..271)
                     /locus_tag="MOX77_004721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HCA3360085.1"
                     /translation="MTNVLIVEDEQAIRRFLRAALEGDGLRVYEAETLQRGLLEAATR
                     KPDLIILDLGLPDGDGIDFIRDLRQWSAIPVIVLSARSEESDKIAA"
     gene            complement(268..>1842)
                     /locus_tag="MOX77_004722"
     CDS             complement(268..>1842)
                     /locus_tag="MOX77_004722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4118 domain-containing protein"
                     /protein_id="HCA3360086.1"
                     /translation="IVALEEPPARALAQTPDNRPFKEKWRGQIQGCLVAVALCAITTF
                     IAMQWLVTFDAANLVMLYLLGVVVIALLYGRWPSVVATVINVASFDLFFIAPRGTLAV
                     SDVQYLLTFAVMLTVGLVIGNLTAGVRYQARVARYREQRTRHLYEMSKALAVGRSEHD
                     IAATSERFIASTFQARSQILLPDTNGKLLPLTHQQGMTPWDDAIARWSFDKGQPAGAG
                     TDTLPGVPYQILPLKSADKTYGLAIVEPGNLRQLMVPEQQRLLETFTLLVANALERLT
                     LTASEEQARLASERESIRNALLAALSHDLRTPLTVLFGQAEILTLDLASAGSPHARQA
                     SEIRQHILNTTRLVNNLLDMARIQSGGFNLKKEWLTLEEVVGSALQMLEPGLLHPITL
                     SLPQQLTLIHVDGPLFERVLINLLENAVKYAGPQASIGIDAAVKDNRLQLDVWDNGPG
                     IPAGQEQKIFDKFARGNKESAVPGVGLGLAICHAIVEVHGGTLTAYNRPQGGACFRVT
                     LPQGKPPELDDFHEDM"
BASE COUNT          422 a          544 c          499 g          377 t
ORIGIN      
        1 gcgcggcaat cttatcgctt tcttcgctgc gggcggaaag gacaatcacc ggtattgcgc
       61 tccactgacg caggtcgcga ataaaatcga ttccgtcgcc gtccggcagg ccgagatcga
      121 gaataatcag atcgggcttt cgcgtggcgg cttccagtaa accacgttgt aatgtttcag
      181 cttcatacac gcgcaggccg tcgccttcca gcgcggcgcg cagaaagcgg cggatggcct
      241 gttcatcttc aacaatcaga acgtttgtca catatcctca tgaaaatcgt caagttcagg
      301 tggctttcct tgcggcagcg tcacacggaa acaggcgccg ccctgcggtc gattataggc
      361 ggtaagcgtg ccgccgtgta cctctacgat agcatggcaa atcgccagcc ccagccccac
      421 gccggggacg gcggactctt tgttgccgcg ggcgaactta tcgaaaatct tctgttcttg
      481 ccccgcagga atacccggcc cattatccca gacatccagt tgtaaacgat tgtccttaac
      541 cgcagcatca atgccgatac tggcctgcgg cccggcgtac ttaacggcgt tttccagcaa
      601 gttgatcagg acacgctcaa ataaggggcc atcgacatgg ataagcgtta actgttgcgg
      661 cagcgacaat gtaatcggat gcaataaacc cggctctaac atctgtaacg cgctaccgac
      721 gacctcttcc agcgtcagcc actctttttt aagattaaac ccgccggact gaatacgcgc
      781 catatccagc aaattattca ccagccgggt ggtgttgaga atatgctggc ggatttcact
      841 ggcctgacgc gcgtggggcg atcctgcgct ggctaaatcc agcgtcaaaa tttccgcctg
      901 gccgaacaat accgtcagcg gcgtgcgtaa atcatgcgac agagccgcca gcagagcgtt
      961 gcgaatactt tcgcgctcgc tggcgagacg cgcctgttct tcgctggcgg tcagcgtcag
     1021 tcgttccagc gcgttggcga caagcagagt gaatgtttcc agcaggcgtt gctgctccgg
     1081 caccattaac tgacgcaaat tacccggttc gacgatagcc agaccgtacg ttttatcggc
     1141 gcttttcagc ggcaggattt gataaggcac gccaggaagg gtatcggtgc ctgcgccggc
     1201 aggctggcct ttatcaaaac tccagcgcgc aattgcgtcg tcccacggcg tcatgccttg
     1261 ctggtgggtg agaggcagca acttaccgtt agtatcaggt aataaaattt ggctgcgcgc
     1321 ctgaaacgtc gaggcgataa accgctcgct ggtcgcggcg atatcatgtt cgctacgccc
     1381 gacggccagc gctttagaca tttcatataa atggcgggta cgctgttccc gataacgggc
     1441 gacgcgcgcc tgatagcgca ccccggcagt aagattgcca atcaccagac caaccgtcag
     1501 catcacggca aaggtcagca aatactgcac gtccgaaacg gcgagcgtac cgcgtggtgc
     1561 gataaaaaag agatcgaaac tcgccacgtt aatcaccgtc gccaccaccg acggccagcg
     1621 tccgtaaagc agcgcaatca ccactacgcc cagcaaatag agcatcacca gattggcggc
     1681 gtcgaaggtg acaagccact gcatagcgat aaacgtggtt atggcgcaaa gcgccacggc
     1741 gaccagacag ccctgaatct gtccacgcca tttctcttta aaaggtcggt tatcaggcgt
     1801 ttgcgccaac gcgcgcgctg gcggctcttc cagcgcgacg at
//
LOCUS       DAGWFR010000352         1818 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.358, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000352 DAGWFR010000000
VERSION     DAGWFR010000352.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1818)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1818)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1818
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.358"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..752
                     /gene="amiB"
                     /locus_tag="MOX77_004723"
     CDS             <1..752
                     /gene="amiB"
                     /locus_tag="MOX77_004723"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase AmiB"
                     /protein_id="HCA3360087.1"
                     /translation="DAGHGGQDPGAIGPGGTREKNVTIAIARKLRTLLNNDPMFKGVL
                     TRDGDYFISVMGRSDVARKQNANFLVSIHADAAPNRDATGASVWVLSNRRANSEMANW
                     LEQHEKQSELLGGAGDVLTNSQSDPYLSQAVLDLQFGHSQRVGYDVATNVLSQLDGVG
                     SLHKRRPEHASLGVLRSPDIPSILVETGFISNHGEERLLASDRYQQQIADAIYRGLRK
                     YFAAHPIQSAPQGSPGQTASTNQPGAITAAN"
     gene            762..>1818
                     /gene="mutL"
                     /locus_tag="MOX77_004724"
     CDS             762..>1818
                     /gene="mutL"
                     /locus_tag="MOX77_004724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HCA3360088.1"
                     /translation="MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDI
                     DIERGGAKLIRIRDNGCGIKKEELALALARHATSKIASLDDLEAIISLGFRGEALASI
                     SSVSRLTLTSRTAEQAEAWQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKF
                     MRTEKTEFNHIDEIIRRIALARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGT
                     PFLEQALAIEWQHGDLTLRGWVADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQAC
                     EDKLGADQQPAFVLYLEIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQT
                     ETTLPLEEIAPAPRHVPE"
BASE COUNT          400 a          498 c          554 g          366 t
ORIGIN      
        1 ttgatgccgg acatggaggc caggaccccg gtgcgatagg cccgggcggt acgcgcgaga
       61 aaaatgtcac catcgccatc gcgcgtaagt tacgcacatt gctgaataac gatccgatgt
      121 ttaaaggcgt gctgacgcgt gacggcgact attttatttc ggtgatgggg cggtctgatg
      181 tggcgcgtaa gcaaaacgcc aacttccttg tctctattca tgcggatgcc gcgccaaatc
      241 gcgacgccac cggcgcctcc gtctgggtat tgtccaatcg tcgcgcgaat agcgaaatgg
      301 caaactggct tgagcagcat gagaagcaat ccgaactgtt aggcggcgct ggcgatgtgc
      361 tgacgaacag tcagtcagac ccttacctga gccaggcggt actggatttg caattcggtc
      421 attcgcagcg ggtagggtat gatgtggcga cgaacgtact aagccaactc gacggcgtgg
      481 ggtcgctgca taaacgtcgc ccggaacacg cgagcctggg cgtgctgcgt tcgccggata
      541 tcccgtccat tttggtggag acgggtttta tcagtaatca cggcgaagaa cgattgctgg
      601 cgagcgaccg ctatcagcag cagattgctg acgctatata ccgggggttg cgtaagtact
      661 ttgcagcgca tccgatccag tctgcgccgc agggcagccc aggccagacg gccagtacca
      721 accagcctgg cgctataacc gccgcgaatt aaggagattt catgccgatt caggttctgc
      781 cgccgcagct tgcgaaccaa atcgccgctg gcgaagtggt ggaacgccct gcgtcggttg
      841 ttaaagagct ggtagagaat agtctggatg caggcgccac ccgcgttgat atcgacatcg
      901 agcgtggcgg cgcgaagctt attcgtattc gcgacaatgg ctgcggcatt aaaaaagagg
      961 agctggcgct ggcgctggcc cgtcatgcca ccagtaaaat cgcctcgctt gacgatctgg
     1021 aagcgattat cagtctggga tttcgcggcg aagcgctggc gagtatcagt tcggtctcgc
     1081 gtttgacgct aacgtcgcgc acggcggagc aggcggaagc ctggcaggcg tatgcggaag
     1141 ggcgcgacat ggacgtgacg gtaaaacccg ccgcgcaccc ggtcggcacc accctggaag
     1201 ttctggatct cttttataat acgcccgccc ggcgcaaatt catgcgtacc gaaaaaacgg
     1261 aatttaatca catcgatgag atcatccgtc gtattgcatt ggcccgtttt gacgtcacgc
     1321 ttaacctgtc gcacaacggc aaattggtac ggcagtatcg cgctgtcgca aaggacgggc
     1381 aaaaagagcg ccggttaggc gccatctgcg gcacgccgtt tctcgaacag gcactggcga
     1441 tcgagtggca gcatggcgat ctgaccctgc gcggctgggt cgccgatccg aatcacacca
     1501 ccacggcgtt aacggagatc cagtactgct atgtgaatgg ccgcatgatg cgcgaccgct
     1561 tgatcaacca tgccattcgc caggcctgtg aagataaact gggcgcggac caacagcctg
     1621 cgtttgtgtt gtatctggag attgacccgc atcaggtgga tgtcaatgtt catcccgcca
     1681 agcacgaagt gcgttttcat caatcgcggc tggtgcacga cttcatctat caaggggtgc
     1741 tgagcgttct acaacagcag acggaaacga cgctgccgct ggaggagatt gcgccagcgc
     1801 cgcggcatgt cccggaaa
//
LOCUS       DAGWFR010000353         1816 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.359, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000353 DAGWFR010000000
VERSION     DAGWFR010000353.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1816)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1816)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1816
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.359"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..784
                     /gene="dnaE"
                     /locus_tag="MOX77_004725"
     CDS             <1..784
                     /gene="dnaE"
                     /locus_tag="MOX77_004725"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005225231.1"
                     /note="catalyzes DNA-template-directed extension of the
                     3'- end of a DNA strand by one nucleotide at a time; main
                     replicative polymerase; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HCA3360089.1"
                     /translation="SLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYASCQPW
                     PEQVVLDGERETLGLYLTGHPINQYLKEIERYVGGVRLKDMHPTERGKVTTAAGLVIA
                     ARVMVTKRGNRIGICTLDDRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFS
                     GGLKMTAREVMDIDEAREKYARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLY
                     YQRADARARLRFGATWRVSPSDRLLNDLRGLIGSEQVELEFD"
     gene            797..1756
                     /gene="accA"
                     /locus_tag="MOX77_004726"
     CDS             797..1756
                     /gene="accA"
                     /locus_tag="MOX77_004726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyl transferase
                     subunit alpha"
                     /protein_id="HCA3360090.1"
                     /translation="MSLNFLDFEQPIAELEAKIDSLTAVSRQDEKLDINIDEEVHRLR
                     EKSVELTRKIFADLGAWQVAQLARHPQRPYTLDYVRLAFDEFDELAGDRAYADDKAIV
                     GGIARLEGRPVMIIGHQKGRETKEKIRRNFGMPAPEGYRKALRLMEMAERFNMPIITF
                     IDTPGAYPGVGAEERGQSEAIARNLREMSRLNVPVICTVIGEGGSGGALAIGVGDKVN
                     MLQYSTYSVISPEGCASILWKSADKAPLAAEAMGIIAPRLKELKLIDSIIPEPLGGAH
                     RNPEAMAASLKAQLLEDLADLDVLSTDDLKNRRYQRLMSYGYA"
BASE COUNT          425 a          460 c          534 g          397 t
ORIGIN      
        1 ctcattgggc gatgcgctga aagccgccga ccagcacgcc aaagcggaag ctatcggtca
       61 ggcggatatg ttcggcgtac tggcggaaga gccggagcaa atcgaacaat cctatgccag
      121 ctgccagccg tggccggagc aggtggtgtt agatggggaa cgtgaaacgt tggggctgta
      181 cctgacgggc caccctatca atcagtattt aaaagaaatt gagcgctatg tcggcggggt
      241 aaggctcaaa gacatgcatc cgacagaacg tggtaaagtc accacggctg cggggctcgt
      301 gattgccgca agggttatgg tcaccaagcg cggcaatcgt atcggcatct gtacgctgga
      361 tgaccgttcc gggcgtctgg aagtgatgtt atttaccgac gcgctggata aataccagca
      421 gttgctggaa aaagaccgca tacttatcgt cagcggacag gtcagctttg atgacttcag
      481 cggggggctt aaaatgaccg cccgcgaagt gatggatatt gacgaagctc gcgaaaaata
      541 cgctcgcggg cttgctatct cgctgacgga caggcaaatt gatgaccagc ttttaaaccg
      601 actccgtcag tctctggaac cccaccgctc ggggaccatt ccagtacatc tctactatca
      661 gagggcggat gcgcgtgcgc ggctgcgttt tggcgcaacg tggcgtgtct ctccgagcga
      721 tcgtttactt aacgatctgc gtggcctcat tggttcggag caggtggaac tggagtttga
      781 ctaatacagg aatactatga gtctgaattt ccttgatttt gaacagccga tagcagagct
      841 ggaagcgaaa atcgattctc tgactgcggt aagccgccag gatgagaaac tggatattaa
      901 tatcgatgaa gaagtccatc gcctgcgcga aaaaagcgta gaactgacgc gcaaaatctt
      961 cgccgatctc ggcgcatggc aggtagccca actggcgcgc catccgcagc gtccgtacac
     1021 cttggattat gtccgtctgg cgtttgatga gtttgatgag ctggcgggcg atcgcgccta
     1081 tgctgatgac aaagccatcg tcggcggtat cgcgcgtctg gaagggcgac cggtgatgat
     1141 cattggtcat cagaaaggtc gtgaaaccaa agaaaaaatt cgtcgtaact ttggcatgcc
     1201 agcgccggaa ggctaccgca aagcgctgcg cctgatggaa atggctgaac gcttcaacat
     1261 gccgattatc accttcatcg acaccccggg cgcttaccct ggcgtgggcg cggaagagcg
     1321 tggtcagtct gaagctatcg cccgcaacct gcgtgagatg tctcgtctga acgtaccggt
     1381 catctgcacc gtgattggcg aaggcggctc cggcggcgca ttggcgattg gcgtgggtga
     1441 taaagtgaat atgctgcaat acagcaccta ttccgttatc tccccggaag gttgcgcctc
     1501 tattttgtgg aagagcgccg acaaagcgcc attggctgct gaagcgatgg gcatcatcgc
     1561 gccgcgtctg aaagagctga agctaatcga ttccatcatt ccggagccgc tgggcggcgc
     1621 gcaccgtaat ccggaagcga tggcggcgtc gctaaaagcg cagctgctgg aagatttagc
     1681 cgatctcgat gtgttaagca ccgatgattt aaaaaaccgt cgttaccagc gtttgatgag
     1741 ctacggttac gcctaatcat ttacctcatt tctcccagga ggccggataa tccggcctct
     1801 tttttgtcta tggaaa
//
LOCUS       DAGWFR010000354         1797 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.360, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000354 DAGWFR010000000
VERSION     DAGWFR010000354.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1797)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1797)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1797
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.360"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            223..882
                     /locus_tag="MOX77_004727"
     CDS             223..882
                     /locus_tag="MOX77_004727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011152976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type A-1 chloramphenicol O-acetyltransferase"
                     /protein_id="HCA3360091.1"
                     /translation="MEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAF
                     LKTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETF
                     SSLWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNV
                     ANMDNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGG
                     A"
     gene            complement(1083..1460)
                     /locus_tag="MOX77_004728"
     CDS             complement(1083..1460)
                     /locus_tag="MOX77_004728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000656306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HCA3360092.1"
                     /translation="MKDYLCKKLFNRLSGTLVIRARCGNNITGLACCNILYPSPRYSG
                     QLHIKELYVSQCDRNKGTGKAIMRFIARLALEQECLSLSWNAEKSNPGANRFYQALGG
                     RINDHIVNYYLHGESLSKLASGI"
     gene            complement(1527..>1797)
                     /locus_tag="MOX77_004729"
     CDS             complement(1527..>1797)
                     /locus_tag="MOX77_004729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001138064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Tn3 family transposase"
                     /protein_id="HCA3360093.1"
                     /translation="IRDRSFEQQRYRASGLNLVTAAIVLWNTVYLERAAHALRGNGHA
                     VDDSLLQYLSPLGWEHINLTGDYLWRSSAKIGAGKFRPLRPLQPA"
BASE COUNT          458 a          425 c          448 g          466 t
ORIGIN      
        1 gacgcacttt gcgccgaata aatacctgtg acggaagatc acttcgcaga ataaataaat
       61 cctggtgtcc ctgttgatac cgggaagccc tgggccaact tttggcgaaa atgagacgtt
      121 gatcggcacg taagaggttc caactttcac cataatgaaa taagatcact accgggcgta
      181 ttttttgagt tatcgagatt ttcaggagct aaggaagcta aaatggagaa aaaaatcact
      241 ggatatacca ccgttgatat atcccaatgg catcgtaaag aacattttga ggcatttcag
      301 tcagttgctc aatgtaccta taaccagacc gttcagctgg atattacggc ctttttaaag
      361 accgtaaaga aaaataagca caagttttat ccggccttta ttcacattct tgcccgcctg
      421 atgaatgctc atccggaatt ccgtatggca atgaaagacg gtgagctggt gatatgggat
      481 agtgttcacc cttgttacac cgttttccat gagcaaactg aaacgttttc atcgctctgg
      541 agtgaatacc acgacgattt ccggcagttt ctacacatat attcgcaaga tgtggcgtgt
      601 tacggtgaaa acctggccta tttccctaaa gggtttattg agaatatgtt tttcgtctca
      661 gccaatccct gggtgagttt caccagtttt gatttaaacg tggccaatat ggacaacttc
      721 ttcgcccccg ttttcaccat gggcaaatat tatacgcaag gcgacaaggt gctgatgccg
      781 ctggcgattc aggttcatca tgccgtttgt gatggcttcc atgtcggcag aatgcttaat
      841 gaattacaac agtactgcga tgagtggcag ggcggggcgt aattttttta aggcagttat
      901 tggtgccctt aaacgcctgg ttgctacgcc tgaataagtg ataataagcg gatgaatggc
      961 agaaattcga aagcaaattc gacccggtcg tcggttcagg gcagggtcgt taaatagccg
     1021 cttatgtcta ttgctggttt accggtttat tgactaccgg aagcagtgtg accgtgtgct
     1081 tctcaaatgc ctgaggccag tttgctcagg ctctccccgt ggaggtaata attgacgata
     1141 tgatcattta ttctgcctcc cagagcctga taaaaacggt tagcgccggg gttggatttt
     1201 tcagcgttcc agctaaggct aaggcattcc tgttcaagcg caagccgggc tataaagcgc
     1261 attatcgctt tacccgtgcc cttatttcga tcgcactgag aaacatacag ctctttaata
     1321 tgcagctgac cgctgtatcg gggcgaggga taaagaatat tgcaacatgc caggccagta
     1381 atgttattgc cgcagcgcgc tctgatcacc agggtaccgg aaagccggtt gaataacttt
     1441 ttacagagat aatccttcat caacgcttcc tgaatgatac cttcgccata ataggggtcg
     1501 tctcagaaaa cggaaaataa agcacgctaa gccggttgca gaggccgtag cggcctgaac
     1561 ttccccgcgc cgatcttggc gctgctgcgc cataggtaat caccggtcag gttgatgtgc
     1621 tcccagccga gtggcgacag gtactgcaat agcgagtcat cgacggcatg accattgccg
     1681 cgcaacgcat gcgccgcacg ctccaggtag accgtgttcc acagcacgat ggccgccgtc
     1741 accaggttga ggccgctggc ccggtagcgc tgctgctcga aactgcggtc acggatt
//
LOCUS       DAGWFR010000355         1792 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.361, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000355 DAGWFR010000000
VERSION     DAGWFR010000355.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1792)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1792)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1792
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.361"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            346..786
                     /locus_tag="MOX77_004730"
     CDS             346..786
                     /locus_tag="MOX77_004730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001748181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HCA3360094.1"
                     /translation="MQKYIFSADKNAFFPVELKIAYQESGEWPDDGIEIDDTVAAEFM
                     KEAPEGKYRGVIDGMPAWIDIPPPTHEEQIAAAELEKQQLINQVNEYINSKQWPGKAA
                     IGRLKGEELAQYNLWLDYLDALELVDTSGAPDIEWPTPPAVQAR"
     gene            complement(758..1351)
                     /locus_tag="MOX77_004731"
     CDS             complement(758..1351)
                     /locus_tag="MOX77_004731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HCA3360095.1"
                     /translation="MKPVFDENGLATVPGDMRCYYYDAVTSEYTGWSDEYINTGVSMP
                     ACSTGIDPGEYIPGRVAVFTGKGWSHEEDHRNETVYSTENGAAVTVDYIGAIKDGYVT
                     LSPLTPYDKWDGEKWVTDTEAQHSAAVEAAEAQRQSLIDAAMASISLIQLKLQAGRKL
                     TQPENTRLNAVLDYIDAVTATDTSTAPDVIWPELPEA"
     gene            complement(1351..>1792)
                     /locus_tag="MOX77_004732"
     CDS             complement(1351..>1792)
                     /locus_tag="MOX77_004732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016243689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tail fiber protein"
                     /protein_id="HCA3360096.1"
                     /translation="PVGVPVPWPSATPPTGWLKCNGAAFSAEEYPELAKVYPTNKLPD
                     LRGEFIRGWDDGRGVDAGRQLLSSQGDAIRNIEGFADGGIGMSFDAIRGAFYDAGTRS
                     ARMPNNTTDIGKTDDLGFDASRVVPTANENRPRNIAFNYIVRAA"
BASE COUNT          463 a          445 c          416 g          468 t
ORIGIN      
        1 ggcaaaacgg aatgtgggca caggagataa tcagataccg gatatgggag cattcgcttc
       61 tggttcggga tggttcaggc taccaggtgg atatattgtt cagtttggca ctttttcagg
      121 aaacacgacc cgctttatca gtggacactt ccctatacca ttccctaatc agccgatggt
      181 ttcagtcagt gttatgtctg ataacgttca gtcagacccg tcgattcctg ctccgcaggt
      241 tttgtctgta aattttgaac atatcagtaa ttcagcgtgg cgtgtggcaa ccagtgatat
      301 ctcacagcaa tacagattca gttatatttc gataggacgg tagaaatgca gaaatatatt
      361 ttcagcgccg ataaaaatgc gtttttccct gtggagctta aaatcgctta tcaggaatcc
      421 ggcgaatggc ccgatgatgg aatcgaaatt gacgacactg ttgccgccga atttatgaag
      481 gaagcaccag aaggaaaata cagaggtgtc atcgacggaa tgcctgcatg gattgatatt
      541 ccaccgccaa ctcatgagga acaaattgcc gcagccgaac tggaaaagca gcaattgatt
      601 aatcaggtca acgaatacat aaacagtaag caatggcctg gtaaagcggc gattggtcgc
      661 ctgaaaggtg aggaactggc gcaatataat ttgtggctgg attatctgga cgcactggaa
      721 ctggtcgata cttccggtgc gccagatatt gaatggccta cgcctccggc agttcaggcc
      781 agatgacgtc cggcgctgtg ctggtatctg ttgccgttac cgcgtcaata taatccagca
      841 cagcgttaag tcgggtgttt tctggctgcg tcagcttccg cccggcctgt aatttcagtt
      901 gaatcagact gatggaagcc attgcagcat caatcagcga ctggcgctgt gcttctgcag
      961 cttctactgc ggcgctatgc tgtgcctcgg tatccgtcac ccatttctca ccatcccatt
     1021 tatcgtatgg cgttaacggt gaaagcgtga cataaccgtc tttgatggca ccgatataat
     1081 ccactgtaac agctgcgcca ttttcagttg agtaaacggt ctcattgcga tggtcttctt
     1141 catggctcca tcccttaccc gtaaatactg ccactcttcc cggaatgtat tcgcccgggt
     1201 caataccagt ggaacaagcg ggcatactta cgccagtatt aatatattca tcagaccagc
     1261 ccgtatattc agacgttact gcatcataat aataacaacg catatcaccc ggcactgtag
     1321 ccagcccatt ttcatcaaaa acaggtttca ttatgcagcc ctcacaatat aattaaaggc
     1381 gatgttacgt ggacggtttt cattagctgt tggcacgaca cgagaggcgt cgaatccaag
     1441 gtcatcggtt ttgcctatat cagttgtgtt attcggcatt ctcgcagatc gtgttcctgc
     1501 atcataaaaa gcccctctga ttgcatcaaa agacataccg atcccgccat ctgcgaatcc
     1561 ctcaatattt cttattgcat ccccctgtga agataataat tgtcgcccgg catccactcc
     1621 acgtccgtca tcccagccac gaataaattc accgcgtaaa tcaggcaatt tatttgtcgg
     1681 gtaaaccttt gccagttccg ggtattcttc agcagaaaaa gccgcaccat tgcatttcag
     1741 ccagcctgtt ggcggagtgg cggaaggcca cggaacaggc acaccaacgg gt
//
LOCUS       DAGWFR010000356         1788 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.362, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000356 DAGWFR010000000
VERSION     DAGWFR010000356.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1788)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1788)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1788
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.362"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..1112
                     /locus_tag="MOX77_004733"
     CDS             <1..1112
                     /locus_tag="MOX77_004733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HCA3360097.1"
                     /translation="DNPVKAKISVMNWVQAADDASKVTPDMGLKDADKLDSNIRILFS
                     LAGNYLANQNPDLHQAVRVLEDESKIQFIVASDLFMTPSAKYADLLLPETSFMERWNI
                     GETWGTASYLILSEKLIEPEFERRSDYDWLREVAAKLGIENEFSQGRDEKAWIEHIWE
                     QTRLAMPDENLPDFATLQKTRQHLFKSAPFIAFEDNIRDPDNHPFPTPSGKIEVFSKR
                     LYDMQHPEIPALSHYVPAHEGPEDALVKDFPLQLITWKGKNRANSTQYANPWLIEVQQ
                     QTLWINPQDAQTRGITHGDMVRIHNSRGICEIPAEVTPRIIPGVVAMQAGAWWQPDEN
                     GIDKGGCANVLSSARITALAKGNSHQTMLVEVAKA"
     gene            1109..1738
                     /gene="dmsB"
                     /locus_tag="MOX77_004734"
     CDS             1109..1738
                     /gene="dmsB"
                     /locus_tag="MOX77_004734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dimethylsulfoxide reductase subunit B"
                     /protein_id="HCA3360098.1"
                     /translation="MSQFTHYPPVSDKQLGFFIDSSRCSGCKACQVACKDKNNLEVGR
                     RFRRVYEVKGGSFIPTGQGGVSNNVFAYTLSISCNHCADPVCTKNCPTTAMHKRPGDG
                     IVRVDTDKCVGCGYCAWSCPYGAPQLNEQTGQMSKCDMCVDLLAKGESPGCVATCPLE
                     AIKFGPIDELRAKYGSVCDVNGLPDSSITKPNLVVKAHQGAEKEGKRHA"
BASE COUNT          440 a          469 c          507 g          372 t
ORIGIN      
        1 cggataaccc ggtaaaagcc aaaatttcgg tgatgaactg ggtgcaggcc gcagacgacg
       61 ccagcaaagt gacgccggat atggggctga aagatgccga taagctggac agtaacatcc
      121 gtattctgtt ctcgctggcc gggaactatc tggcgaatca gaaccccgat ctgcaccagg
      181 cggtacgcgt actggaggat gaatcaaaga tccagtttat tgtcgccagc gatctgttta
      241 tgacgccgag cgcgaaatac gccgatctac tgctgccgga aaccagcttt atggaacgtt
      301 ggaacatcgg tgaaacttgg ggcacggcaa gctacctgat actctctgaa aaactgatcg
      361 agcctgaatt tgagcgtcgc tccgactacg actggctacg tgaggtggcg gcgaaattag
      421 gcattgagaa tgaatttagc caggggcgcg atgagaaagc gtggattgaa cacatctggg
      481 aacagacgcg cctggcgatg ccggacgaaa atctgccgga ttttgccaca ctgcaaaaga
      541 cccgtcagca tctgttcaaa agcgcgccat ttatcgcctt tgaagacaat attcgcgatc
      601 cggacaatca tccgttcccg acgccgtcag ggaaaataga ggtcttctcg aagcgcctgt
      661 acgacatgca gcatccggaa atcccggcgt tgtcgcacta cgttcccgcg catgaaggcc
      721 cggaggatgc gctggtgaaa gattttccgc tccagttaat tacgtggaaa ggaaaaaacc
      781 gcgccaactc aacgcaatac gctaacccgt ggctgattga agtgcagcag cagacattgt
      841 ggatcaaccc gcaggatgcg caaacgcgcg gcattacgca tggcgacatg gtgcgcattc
      901 ataactcacg cggaatttgc gaaatcccgg cggaagtgac gccgcgcatt attcccggcg
      961 ttgtcgcgat gcaggctggc gcctggtggc agccggatga gaacggtatt gataaaggcg
     1021 gctgcgcgaa cgtcctcagc tcggcccgta ttaccgccct ggcgaaggga aattcacatc
     1081 aaaccatgct ggtggaggtg gcaaaagcat gagccagttt acacattacc cgccggtgag
     1141 cgataaacaa ctgggatttt tcatcgactc ctcacgctgc tccggttgta aagcctgcca
     1201 ggtggcctgc aaagacaaaa acaatctgga agtaggccgt cgtttccgcc gcgtctatga
     1261 agtcaagggc ggaagtttca tcccgaccgg gcagggcggg gtcagcaata acgtatttgc
     1321 ttatacgctt tctatttcct gcaaccactg tgcggatcct gtctgcacca aaaattgccc
     1381 gactaccgct atgcataaac gcccaggtga cggcattgtg cgcgttgata ccgacaaatg
     1441 cgtcggctgt ggctattgcg cctggtcctg cccttatggc gcgccgcagc ttaacgagca
     1501 gaccggccaa atgtccaagt gcgacatgtg cgttgattta ctggcgaaag gtgaatcgcc
     1561 cggctgtgtc gcgacctgtc cgctggaggc catcaagttt ggcccgattg atgaactgcg
     1621 cgcgaagtac ggtagcgtat gcgacgttaa cgggctgcca gattcatcca taaccaaacc
     1681 taatctggtt gtcaaagcgc atcagggcgc agaaaaagag ggtaaacgcc atgcatgagt
     1741 taccgctgct gatttttacg ctctgtttgc aagggtccgt gggcgtga
//
LOCUS       DAGWFR010000357         1753 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.363, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000357 DAGWFR010000000
VERSION     DAGWFR010000357.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1753)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1753)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1753
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.363"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            1..547
                     /locus_tag="MOX77_004735"
                     /pseudo
     CDS             1..547
                     /locus_tag="MOX77_004735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459390.1"
                     /note="with SbcD cleaves DNA hairpin structures; also has
                     5' single-strand endonuclease activity; frameshifted;
                     incomplete; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="exonuclease subunit SbcC"
     gene            720..1753
                     /gene="araJ"
                     /locus_tag="MOX77_004736"
                     /pseudo
     CDS             720..1753
                     /gene="araJ"
                     /locus_tag="MOX77_004736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459389.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter AraJ"
BASE COUNT          351 a          453 c          504 g          445 t
ORIGIN      
        1 gcggaaatga agcaagcctc tcagcaagtg gaagactggg gctatctcaa tgcgctgatc
       61 ggctctaaag aaggtgataa gttccgcaaa ttcgcccagg gactgacgct ggataatctg
      121 gtctggctgg cgaatcatca gctcacccgc ctgcatggcc gctatttatt gcagcgcaaa
      181 gccagcgacg cgctggaact ggaggttgtc gatacctggc aggccgacgc cgtgcgcgat
      241 acgcgaacgt tatcaggcgg cgaaagcttc ctggtcagcc tggcgctggc gctggcgtta
      301 tcagatttgg tcagccataa aacgcgcatt gattccttgt tcctggacga aggcttcggc
      361 acgcttgata gcgaaacgct ggacgccgcg ctggatgcgc tcgacgcgct gaatgccagc
      421 gggaagacca tcggtgtgat tagccacgtg gaagccatga aagaacgtat ccccgtgcag
      481 ataaaagtga aaaaaaatca atgggcttgg ttatagcaaa ctggacaaag cgtttgccgt
      541 ggagtaacgc gagtgtcatc ctgcgcacag cataccgtca tgacatagca taataatgaa
      601 tacacaaaga cgaataagga atggtattac ctcgcgctta tccgcaagct atacgttgat
      661 tggctgtgac aattcatagc cacagcgcgc gacatgcgtc ttcattttcg gcaggtggta
      721 tgaaaaaagt tattttttct ttggcgctgg gtacgttcgg actggggatg gccgagtttg
      781 gcattatggg cgtgctgacg gagctggcac gcgatgtcgg gataacgatt cccgccgccg
      841 ggcatatgat ctcgttttac gccttcggcg tcgtgctggg cgcgcctgta atggcgctct
      901 tttccagccg cttttcgctt aaacatatac tgctgtttct ggtcatactg tgcgtgatgg
      961 gcaatgccat atttaccttt tcctcgtcat atctgatgct cgccgtcggc agactggttt
     1021 ccggctttcc acacggcgcc ttttttggcg tcggtgccat tgtcttgtca aagattatcc
     1081 gccccgggaa ggtcaccgcc gccgtcgcgg gtatggtttc agggatgacg gtggcgaatc
     1141 tggtgggcat tccgttcggc acttacctga gccaggaatt tagctggcgc tacacctttt
     1201 tattgatcgc ggttttcaac atcgccgtgc tcaccgcgat tttcttctgg gtgccggata
     1261 ttcgcgacaa agcccaaggc agcctgcgcg agcagttcca cttcttgcgt agccccgcgc
     1321 cgtgactcat tttcgccgcc acgatgttcg gcaatgcggg cgtttttgcc tggttcagct
     1381 atatcaagcc atttatgatg tacatctccg gtttttcgga gacgagcatg acgtttatta
     1441 tgatgctggt cgggctgggg atggtgttag gcaatctgtt aagcggcaaa ctctccggta
     1501 gatatacgcc gctgcgcatc gcggtagtga ctgacctcgt tatcgtgctc tctctcatgg
     1561 cgctcttttt cttcagcgga tacaaaacgg catcgctgac tttcgcgttt atctgctgtg
     1621 ctggtctgtt tgcgctctct gcgccgctgc aaatcctgct gctgcaaaac gccaaaggcg
     1681 gcgaactgct gggcgcggcg ggagggcaaa tcgcgtttaa tctcggtagc gcgattggcg
     1741 cctggtgcgg cgg
//
LOCUS       DAGWFR010000358         1733 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.365, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000358 DAGWFR010000000
VERSION     DAGWFR010000358.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1733)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1733)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1733
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.365"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..879
                     /locus_tag="MOX77_004737"
     CDS             <1..879
                     /locus_tag="MOX77_004737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HCA3360099.1"
                     /translation="ALAELAQRAGILAGVFNVVTGSAGDIGGELTSNPLVRKLSFTGS
                     TEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCA
                     NRLYVQDGVYDRFAEKLNQAVNKLAVGDGLQADVAIGPLIDEKAVAKVQEHIADALEK
                     GARVITGGEAHKLGGNFFQPTILADVPDNAKVAKEETFGPLAPLFRFSDEADVIRQAN
                     DTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSK
                     YGIEDYLEIKYMCIGL"
     gene            894..>1733
                     /locus_tag="MOX77_004738"
     CDS             894..>1733
                     /locus_tag="MOX77_004738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HCA3360100.1"
                     /translation="MNTNNTLMQRCHNAVPRGVGQIHPIFAERAENCRVWDVEGREYL
                     DFAGGIAVLNTGHLHPGIVSAVEAQLKKLSHTCFQVLAYEPYLALCERMNQKVPGDFA
                     KKTLLVTTGSEAVENAVKIARAATKRSGAIAFSGAYHGRTHYTLSLTGKVHPYSAGMG
                     LMPGHVYRALYPCPLHNISDDDAIASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAAS
                     PAFMQRLRALCDQHGIMLIADEVQSGAGRTGTLFAMEQMGVAADITTFAKSIAGGFPL
                     AGVT"
BASE COUNT          391 a          471 c          503 g          368 t
ORIGIN      
        1 gcgctggcgg aactggccca gcgcgccgga attctcgcag gcgtatttaa cgtcgttacc
       61 ggttcggcag gcgatatcgg cggcgagctg accagcaacc cgctggtacg caaactgtcg
      121 tttaccggct cgacggagat tggccgccag ctaatggaac aatgcgccaa agacattaaa
      181 aaagtatcgc tggagttggg cggcaatgcg ccgtttatcg tctttgacga tgccgatctg
      241 gataaagccg tcgagggcgc gctggcttcg aagtttcgca acgccgggca gacctgtgtc
      301 tgcgccaata gattgtatgt tcaggacggc gtttacgatc gttttgcgga aaaactcaac
      361 caggcggtaa ataagctcgc ggtcggcgac ggcctgcaag ccgacgtcgc tatcgggccg
      421 ctgattgatg aaaaagccgt ggctaaagtc caggagcata tcgccgacgc gctggaaaaa
      481 ggcgcccgcg taattacggg cggtgaagcg cacaaattag gcggcaactt ctttcaaccg
      541 accattctgg cggatgttcc tgataacgcg aaagtcgcca aagaagagac attcgggccg
      601 ctcgcgcctc tgttccgctt cagcgacgag gcggatgtca tcaggcaggc taacgatacc
      661 gagttcggcc tggcagccta tttttatgca cgcgatttaa gccgcgtttt ccgcgtcggc
      721 gaagcgctgg aatacggcat cgtcggtatt aataccggca ttatctccaa cgaagtcgcg
      781 cctttcggcg gtattaaggc ctccggatta ggccgtgaag gttccaaata cggcatcgaa
      841 gattatttag aaatcaaata tatgtgcatc ggcctttaac aggagagtcg ctaatgaata
      901 ccaataacac tttaatgcag cgctgtcata acgccgttcc tcgcggcgtg ggccagattc
      961 acccgatttt cgccgagcgg gcggaaaatt gtcgggtctg ggatgtcgaa ggccgtgagt
     1021 atctcgattt cgcgggcggc attgccgtcc tgaacaccgg tcatttacat ccgggcattg
     1081 tttcagcggt cgaagcgcag ttgaagaaat tgtcgcatac ctgttttcag gtgctggcct
     1141 atgaaccgta cctggcgctg tgcgaacgca tgaaccagaa ggtaccgggc gatttcgcca
     1201 aaaaaacgtt gctggtcacg accggttcag aagcagttga aaacgcggtg aaaatcgccc
     1261 gcgcggcgac aaaacgcagc ggcgctatcg cgtttagcgg cgcttaccac ggtcgtaccc
     1321 actacacgct ctctctgacc gggaaagtac acccgtactc tgcgggtatg ggattgatgc
     1381 caggccatgt ctaccgcgcg ctttatcctt gcccgctaca caacatcagc gacgacgacg
     1441 cgatcgccag cattgaacgc atctttaaaa atgatgccgc gccggaagat atcgccgcca
     1501 ttattattga gccggtacag ggcgaaggcg gattttacgc cgcctctccc gcgtttatgc
     1561 agcgactgcg cgcgctatgc gaccaacacg gcattatgtt gattgccgac gaagtgcaaa
     1621 gcggcgcggg ccggaccggt acgctgttcg ccatggaaca gatgggcgtt gcggcagata
     1681 ttaccacgtt tgcgaaatcg atcgccggcg gctttccgct ggcaggcgtt acc
//
LOCUS       DAGWFR010000359         1723 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.366, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000359 DAGWFR010000000
VERSION     DAGWFR010000359.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1723)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1723)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1723
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.366"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..291
                     /locus_tag="MOX77_004739"
     CDS             <1..291
                     /locus_tag="MOX77_004739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginase family protein"
                     /protein_id="HCA3360101.1"
                     /translation="DCHDALAQMTQFIDKVDKIYLTIDLDVLPVWEMPAVSAPAALGV
                     PLIQVLRLIEPVCRSGKLQAADLVEFNPRFDEDGAAARVAARLGWQIAHWWR"
     gene            336..1061
                     /locus_tag="MOX77_004740"
     CDS             336..1061
                     /locus_tag="MOX77_004740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine utilization repressor"
                     /protein_id="HCA3360102.1"
                     /translation="MYSSRSRSAPAPFYETVKQDICKKIAGGVWQPHDRIPSEAELVA
                     QYGFSRMTINRALRELTDEGWLVRLQGVGTFVAEPKGQSALFEVRSIAEEIAARHHQH
                     RCEVLTLERVRANAIQASALNVNESDVIFHSIMVHYENDLPVQIEDRCVNADIAVDYL
                     TQDYRQTTPHAYLSRIAPLTEGEHIVEAVRATAQECAWLTIKEHEPCLLIRRTTWSAS
                     RIVSHARLLFPGSRYRLQGRFIS"
     gene            1257..>1723
                     /locus_tag="MOX77_004741"
     CDS             1257..>1723
                     /locus_tag="MOX77_004741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017441920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urocanate hydratase"
                     /protein_id="HCA3360103.1"
                     /translation="MPESKYRQQTIRAPRGTVLTAKSWLTEAPLRMLMNNLDPDVAEN
                     PHELVVYGGIGRAARNWECYDAIVDALTRLEADETLLIQSGKPVGVFKTHDNAPRVLI
                     ANSNLVPHWATWEHFNELDAKGLAMYGQMTAGSWIYIGSQGIVQGTYETFVEAG"
BASE COUNT          379 a          432 c          509 g          403 t
ORIGIN      
        1 gactgccatg acgcgctggc gcagatgacg cagtttattg acaaggtgga taaaatttat
       61 ctgactatcg atctcgacgt attgcctgtc tgggaaatgc cggccgtctc cgctcccgca
      121 gcgctgggcg tgccgctgat acaggttctg cgtttaattg agccggtttg ccgcagcgga
      181 aaattacagg cggcggatct ggttgaattt aatccacgct ttgatgaaga tggcgcagcg
      241 gcgcgcgtgg cggcgcggct tggctggcaa atcgcgcact ggtggcgtta atctgtcatc
      301 cggaaaacat tatccgcata aggaaggctt cacgcatgta ttcatcccgc tcccgttctg
      361 cgcctgcgcc tttttacgaa acggtgaaac aggacatctg taaaaaaata gccggcggcg
      421 tctggcagcc gcacgatcgc attccgtcgg aagctgaact ggtcgctcag tatggcttta
      481 gccgaatgac catcaaccgg gcgctgcgtg agctgacgga tgaagggtgg ctggtgcgtt
      541 tacagggcgt ggggacgttt gtcgccgaac cgaaaggcca gtccgcactg tttgaagtcc
      601 gcagtatcgc cgaggagatt gccgcccgcc atcatcagca tcgttgtgag gtgctcacgc
      661 tggagcgtgt gcgggcaaac gccatccagg ccagcgctct caacgtcaat gagagtgatg
      721 tcattttcca ttccatcatg gtgcattatg aaaacgatct gccggtacaa attgaagatc
      781 gctgcgtgaa tgcggatatt gccgtggatt acctgacgca ggattaccgt cagaccacgc
      841 cgcacgctta tttgtcgcgg atcgcgccgc taacggaagg ggaacatatt gtggaggcgg
      901 tgcgcgccac ggcgcaagag tgcgcgtggt taactatcaa agagcatgag ccttgtctgc
      961 tcattcgtcg tacaacctgg tccgcgtcgc ggattgtttc tcacgcccgc ttacttttcc
     1021 ccgggtcgcg ctaccggcta cagggacgat ttatctcctg agcggctgct gccggaaaac
     1081 gtgattgctg acacaatata acaaaattgt atcatttttg ttaattctat tcttgtgctt
     1141 acttgtatag ataagtatat gtctgattct tatctgtggg tctgcggcgg tgcctgatag
     1201 tggcgtttta gcgttatttg gcgatggcag accgataata atgaggagtc attgctatgc
     1261 ctgaaagcaa gtatcgtcag cagactatcc gcgcgccccg aggcacggta ttaacggcga
     1321 aaagctggct gacagaagcc ccgctgcgga tgttaatgaa taatctcgat cctgacgtgg
     1381 cggaaaatcc gcatgagctg gtggtctacg gcgggattgg tcgcgccgcg cgcaactggg
     1441 aatgctatga cgctattgtt gatgcgctca cccggctgga ggcggacgaa acgttgctga
     1501 ttcagtctgg caaaccggtc ggcgtattta aaacgcacga caacgcgccg cgggtattaa
     1561 tcgccaactc caacctggtt ccccactggg cgacatggga acactttaac gaactggatg
     1621 cgaaagggct ggcgatgtac ggtcaaatga cggccggaag ctggatctat atcggtagtc
     1681 agggaatcgt gcagggaaca tacgaaacct ttgtcgaggc ggg
//
LOCUS       DAGWFR010000360         1706 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.367, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000360 DAGWFR010000000
VERSION     DAGWFR010000360.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1706)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1706)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1706
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.367"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..399
                     /gene="pduE"
                     /locus_tag="MOX77_004742"
     CDS             <1..399
                     /gene="pduE"
                     /locus_tag="MOX77_004742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propanediol dehydratase small subunit PduE"
                     /protein_id="HCA3360104.1"
                     /translation="DYPLANKHPEWVKTATNKTLDDFTLENVLSNKVTAQDMRITPKT
                     LRLQASIAKDAGRDRLAMNFERAAELTAVPDDRILEIYNALRPYRSTKEELLAIADDL
                     ENRYQAKICAAFVREAAGLYVERKKLKGDD"
     gene            606..>1706
                     /locus_tag="MOX77_004743"
     CDS             606..>1706
                     /locus_tag="MOX77_004743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diol dehydratase reactivase subunit alpha"
                     /protein_id="HCA3360105.1"
                     /translation="MRYIAGIDIGNSSTEVALARQDETGALTITHSALAENTGIKGTL
                     RNVFGIQEALALVAKRAGINVSDISLIRINEATPVIGDVAMETITETIITESTMIGHN
                     PKTPGGAGLGVGITITPEELLTRPADSSYILVVSSAFDFADIANVINASMRAGYQITG
                     VILQRDDGVLVSNRLEKSLPIVDEVLYIDCIPLGMLAAIEVAVPGKVIETLSNPYGIA
                     TVFNLNADETKNIVPMARALIGNRSAVVVKTPSGDVKARAIPAGNLELQAQGRTVRVD
                     VAAGAEAIMKAVDGYGKLDNVNGEAGTNIGGMLEHVRQTMAELTNKPSSEIFIQDLLA
                     VDTSVPVSVTGGLAGEFSLEQAVGIASMVKSDR"
BASE COUNT          425 a          462 c          485 g          334 t
ORIGIN      
        1 gactacccgc tggcgaacaa acacccggaa tgggtgaaaa ccgccaccaa taaaacgctg
       61 gacgacttta cgctggaaaa cgtgctgagc aataaagtca ccgctcagga tatgcgtatt
      121 accccgaaaa ccctgcgctt acaggcgtct atcgccaaag atgcgggccg cgaccggctg
      181 gcgatgaact tcgaacgcgc cgccgaactg accgcggtac cggacgatcg cattcttgaa
      241 atctacaacg cccttcgtcc gtatcgttca acgaaagaag agctgctcgc tatcgccgac
      301 gatctcgaaa accgttatca ggcaaagatt tgcgcagctt tcgttcgtga agcggcaggg
      361 ctgtacgttg agcgtaaaaa actcaaaggc gacgattagc tttctctaag taattcgaga
      421 tgcattgagg cggcaagtga gtgacaaatt cgtctggaac gaatttgaac agccataggc
      481 tggctttagt gagggacagg gatgtccctc ataaccccga tgagcttact gtagtaagtg
      541 attcgggtga aagaacgcag ccaacaaaaa ggcagtttga agtacgacga gaaaaaggat
      601 atacgatgcg atatatagct ggcattgaca tcggtaactc atcaacggaa gtcgcactgg
      661 cgcggcaaga tgagactggc gcactaacga ttacacacag cgcgctggcg gaaaacaccg
      721 ggatcaaagg cacgttgcgt aacgtgttcg gcattcagga agcgctcgcc ctcgtcgcaa
      781 agcgcgcggg gatcaatgtc agcgatattt cgctcatccg cattaacgaa gccacgccgg
      841 tgattggcga tgtggcgatg gaaaccatta ccgaaaccat catcaccgaa tcgacaatga
      901 tcggccataa cccaaaaacg ccgggcggag caggccttgg tgtgggtatc acgattacgc
      961 cggaggagct gttaacccgc ccggcggact cgtcctatat tctggtggta tcgtcagcct
     1021 ttgattttgc tgatatcgcc aatgttatca acgcctcaat gcgcgccgga taccagatta
     1081 ccggcgtcat tttgcagcgc gacgatggcg tactggtcag caaccggctg gaaaaatcgc
     1141 taccgattgt cgatgaagtt ctgtacatcg actgcattcc gctggggatg ctggcggcga
     1201 ttgaagtcgc cgtgccggga aaggttatcg aaaccctctc taacccttac ggcatcgcca
     1261 ccgtattcaa cctcaacgcc gatgagacga aaaacatcgt cccgatggcg cgcgcgctga
     1321 ttggcaaccg ttccgccgtg gtggttaaaa cgccatccgg cgacgtcaaa gcgcgcgcaa
     1381 tacccgccgg taacctggag ctgcaggctc agggtcgtac cgtgcgcgtg gatgttgccg
     1441 ccggtgccga agctatcatg aaagcggtgg acggctacgg caagctcgac aacgtcaacg
     1501 gcgaggccgg gaccaatatc ggcggcatgc tggagcatgt gcgccagacc atggccgagc
     1561 taaccaataa gccgagcagc gagattttca ttcaggatct tctggccgtt gacacctcgg
     1621 ttccggtgag cgtcaccggc ggtctggccg gggagttctc gctggagcag gccgtcggca
     1681 tcgcctcgat ggtgaaatca gaccgt
//
LOCUS       DAGWFR010000361         1705 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.368, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000361 DAGWFR010000000
VERSION     DAGWFR010000361.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1705)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1705)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1705
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.368"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..635
                     /locus_tag="MOX77_004744"
     CDS             <1..635
                     /locus_tag="MOX77_004744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000976816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alanine racemase 3"
                     /protein_id="HCA3360106.1"
                     /translation="RGWAAPDYIISHLANADRPDHALNVYQHTLLQQAKKAFPTSRYS
                     LANSCGMFLHPAWREDLCRPGVALFGVAQPWFSTPLKPAFTLTLTILRVQDVPVGTPI
                     GYGSTVTTTRPLRIATVSAGYADGIPRNLRPPAGVCWRGVRLPVLGRVCMDSFMVDAS
                     AIMPTSGDVVEFIGVSQTLEEVAAACDTIPYEIMARLGARFRRIMQPAEA"
     gene            complement(580..>1705)
                     /locus_tag="MOX77_004745"
     CDS             complement(580..>1705)
                     /locus_tag="MOX77_004745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001681927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HCA3360107.1"
                     /translation="RAVSFDARRVQTFTLGLAETRNFPQTIWQNFARQIQRERAHTLM
                     LHGDPQGEQELRQQIAHYLNFERGAKVDAQQIVIVSGARQAFWLCGQLLAEAGQSVVM
                     ENPGYPGARQAFSAAQLNLLPIEVDGDGIRVDKLPPAPLVYVTPSHQFPSGHLLSLAR
                     RHALIDWAQAHNAWIIEDDYDSEFHYNGAPVACMQGLDREQRTLYVGTFSKTLYPGLR
                     IGYLVVPASLAAHFAAARNLLDGATPALTQLTLARFIASGHFAAHIRTMRSMYAVRQA
                     CLAQAINQHLSDWVTPVVTPGGLQMPCWLHEGIDEQQTLNAARRAGLNIAGMRQFWLT
                     HPAPTGWLLGFAAFTPYEIENGVKLLRAALCAENVRQAGP"
BASE COUNT          338 a          500 c          518 g          349 t
ORIGIN      
        1 agcgtggctg ggctgcgcca gactatatca tcagccatct ggccaacgcc gacaggccgg
       61 atcatgcgtt aaatgtctat cagcatacgc tactccagca ggcaaaaaag gcattcccaa
      121 ccagccgtta ttcgctggca aattcctgcg gtatgtttct gcatccggcc tggcgggaag
      181 atctttgccg tccgggcgtt gcgctgttcg gcgtcgccca gccgtggttt tcaacgccgt
      241 taaaaccggc atttacgctg acgttgacca ttttgcgcgt gcaagacgtg ccggttggga
      301 cgccgattgg ctacggcagt acggttacta ccactcgccc gctgcgtatc gccacggtat
      361 ccgccggata cgctgatggg attccgcgta atttgcgtcc tccggcgggc gtgtgctggc
      421 gcggggttcg gttgccggtg ttggggcggg tctgcatgga cagctttatg gtggacgcca
      481 gcgccatcat gccaacgtct ggcgatgttg tggagtttat tggcgtgagc cagacgctgg
      541 aagaggttgc tgccgcctgc gataccatcc cttatgagat tatggcccgg cttggcgcac
      601 gttttcggcg cataatgcag cccgcagaag cttgactcca ttttcaatct cgtagggggt
      661 aaacgcggcg aatcccaaca gccagcccgt gggcgcgggg tgcgtcagcc agaactggcg
      721 catcccggcg atgtttaacc cggcccgccg cgcggcgtta agggtctgtt gttcgtcaat
      781 accttcatgc agccagcagg gcatttgtaa tcctccgggc gtcactaccg gcgtcaccca
      841 atcactaaga tgctggttga tggcctgcgc caggcacgcc tgccgcaccg cgtacatact
      901 gcgcatggtg cggatatggg cggcaaaatg gccggatgcg ataaatcgcg ccagcgtcaa
      961 ttgggtcaac gcgggcgttg cgccatcaag caaattacgc gcagcggcaa agtgcgcggc
     1021 cagcgacgca ggcaccacca gataaccaat gcgcagaccg gggtagagcg ttttgctgaa
     1081 ggtgccgaca tacagggtgc gctgctcgcg atctaacccc tgcatacagg cgacgggcgc
     1141 gccgttgtag tgaaattcac tgtcgtagtc atcttcgata atccaggcat tatgcgcctg
     1201 tgcccagtca atcagggcat gacgccgcgc cagagagagc aaatgaccgg agggaaactg
     1261 gtgcgacggc gtaacgtaaa ccagcggcgc aggcggcagt ttatccaccc gaataccgtc
     1321 tccatcgact tcaatgggaa gaaggttgag ctgtgcggca gagaatgcct gacgcgcgcc
     1381 gggatagcct ggattttcca tcaccaccga ctgcccggcc tctgccagca gttgcccgca
     1441 tagccagaat gcctgacgcg cgccactgac aatcacaatc tgctgcgcgt cgaccttcgc
     1501 gccgcgttca aaattgagat aatgggcaat ttgctggcgc agttcctgct ctccctgcgg
     1561 atcgccatgc agcattagcg tatgcgcccg ctcgcgctgg atctggcggg caaaattctg
     1621 ccaaatggtt tgcgggaagt ttcgcgtttc cgcaaggccg agcgtaaacg tctgcacccg
     1681 gcgggcatcg aaagatacgg cgcga
//
LOCUS       DAGWFR010000362         1695 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.369, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000362 DAGWFR010000000
VERSION     DAGWFR010000362.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1695)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1695)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1695
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.369"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..>1695
                     /gene="bcsB"
                     /locus_tag="MOX77_004746"
     CDS             <1..>1695
                     /gene="bcsB"
                     /locus_tag="MOX77_004746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cellulose biosynthesis cyclic di-GMP-binding
                     regulatory protein BcsB"
                     /protein_id="HCA3360108.1"
                     /translation="PPGSMALRGVNPNGGIEFGMRSDEVASKAVLNLEYTPSPSLLPV
                     QSQLKVYLNDELMGVLPVTKEQLGKKTLAQVPINPLFITDFNRVRLEFVGHYRDVCEN
                     PASSTLWLDIGRNSALDLTYNMLAVNNDLSHFPVPFFDPRDNRPVTLPIVFADMPDLA
                     QQQAASIVASWFGSRAGWRGQRFPVLYNHLPDRNAIVFATNDRRPDFLRDHPAVNAPV
                     IEMMNHPDNPYVKLLVVFGRDDKDLLQAAKGIAQGNILFRGSSVVVNDVKPLLARKPY
                     DAPNWVRTDRPVTFGELKTYEEQLQSSGLEPAPINVSLNLPPDLYLLRSNGIDMDLNY
                     RYTSPPTKDSSRLDISLNNQFLQAFSLNSTQETNRLLLRLPVLQGLLDGKTDVSIPAL
                     KLGAMNQLRFDFRYMNPMPGGSVDNCITFQPVPNHVVIGDDSTIDFSKYYHFIAMPDL
                     RAFANAGFPFSRMADLSDTLAVMPKTPTEAQMETLLNTVGAIGGQTGFPAINLTITDD
                     SAQIADKDADLLIIGAIPGKLKDDKRIDLLVQATQSWVKTPMRQTAFPSIMPDEADR"
BASE COUNT          365 a          447 c          488 g          395 t
ORIGIN      
        1 gccgccgggc agtatggcgc tgcgtggcgt taaccctaac ggcggcattg aatttggtat
       61 gcgcagcgat gaagtggcgt cgaaagcggt gttgaatctg gaatatacgc cctcgccgtc
      121 gctcctgccg gttcagtcgc agctcaaggt ttatctcaat gatgaactga tgggcgtact
      181 gccggtgaca aaagagcagt tggggaaaaa gacgctggcg caggtaccta tcaatccgct
      241 atttatcacc gactttaacc gggtgcggct ggagtttgtc ggccactatc gcgacgtgtg
      301 tgaaaacccg gccagcagta ctctgtggtt agacatcggg cgaaatagcg ccctggatct
      361 gacctataac atgctggcgg tgaataacga tctgtcccac ttcccggtgc cgtttttcga
      421 tccgcgggat aaccgtccgg tgacgttgcc gatagtgttt gctgacatgc cggatctggc
      481 gcagcagcag gcggcttcta ttgtcgcgtc ctggtttggc tcgcgggcgg gctggcgcgg
      541 tcagcgcttc ccggtgttgt ataatcacct gccggatcgc aatgcgatcg tgttcgccac
      601 caacgatcga cgccccgatt tcctgcgcga tcatcctgcg gttaacgcgc cggttatcga
      661 gatgatgaac catccggata atccgtatgt gaagttgctg gtcgtgtttg gtcgagatga
      721 taaagacctg ttgcaggcgg caaaaggtat cgcgcaaggg aatattctct tccgtggttc
      781 cagcgtggtg gtcaacgatg taaaaccgct gctggcgcgc aaaccgtatg atgcgccgaa
      841 ctgggtgcgt accgatcgcc cggtcacttt tggcgagctg aaaacctatg aagagcagct
      901 ccagtcgagt gggctggagc cggcgcccat caacgtttct ttgaatctgc cgccggacct
      961 ctatttgctg cgtagcaacg gtattgatat ggatctcaac tatcgttata cctcgccgcc
     1021 gaccaaagac agttcgcggc tggatatcag tctgaataac cagttcttgc aagcctttag
     1081 ccttaacagc acgcaggaaa ctaatcgact cctgttgcgc ctgccggtac ttcagggact
     1141 gctggatggt aaaacggatg tgtctattcc ggcgctcaaa ctgggggcga tgaaccaact
     1201 acgttttgat ttccgctaca tgaatccgat gccgggcggg tcggtggaca actgtattac
     1261 tttccagcca gtaccgaatc atgtggtgat aggggatgac tccactatcg atttttcgaa
     1321 atattaccac tttatcgcga tgccggattt acgcgcgttc gccaatgcgg gtttcccgtt
     1381 cagccggatg gccgacctgt ctgacacgct ggcggtgatg ccgaagaccc caaccgaagc
     1441 gcaaatggaa acgctgctga atacggtcgg cgccattggc gggcagaccg gtttcccggc
     1501 aattaatctg acaatcaccg atgatagcgc tcagatagcc gacaaagacg ccgatctgct
     1561 gattattggc gctattccgg gcaagctaaa agacgataag cgtatcgatc tgttggtgca
     1621 ggcgacacaa agctgggtaa aaaccccgat gcggcagacc gctttcccgt cgattatgcc
     1681 ggatgaggcc gatcg
//
LOCUS       DAGWFR010000363         1689 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.370, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000363 DAGWFR010000000
VERSION     DAGWFR010000363.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1689)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1689)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1689
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.370"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            1..1689
                     /locus_tag="MOX77_004747"
                     /pseudo
     CDS             1..1689
                     /locus_tag="MOX77_004747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461449.1"
                     /note="frameshifted; incomplete; missing N-terminus and
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          391 a          492 c          500 g          306 t
ORIGIN      
        1 gcagcgccaa catgtacggc catatggcgg acagttccac cgccacggtg gacggcgcaa
       61 gctacacttt tgaccgcccc aaactggcgg cggaaaccga gggcgaagac cgcgtcgcca
      121 gtatcaataa tgaaaactgg gcgcagttca cctggggcca tgcggataaa cactgcgata
      181 ttctgccgga tgcgcgccaa ctggaagggt taaaaatcga gcgcggcgat ttagccacca
      241 ctctcggctg gccggtgggg tgacatccgg tgacgaagag cactggtcct cctcacaggg
      301 ggcgagcgca actgaccaca tcagcattga tatgcgcagc cgcgccctta cgcagatgcc
      361 ggacgccacg caatcgctgg tgagctgtgt ggataaagcc tcgcctgcgg tcacgccgaa
      421 attagtgatt agcaccgata attttgattc gacggccaac gcggcgaaag tgaaggtggg
      481 cgaagagatc aacatgaaga tcgccgtcac cgacagcgcc accaataaac cgctgcctta
      541 tcgctacttt aatgtctacc tgggcgacga gcaaaatcgc cagaatcaga agaacgccga
      601 tcttgatgcc gcgcatcagt ggacggatga accggtagtt atcgccaatc tggacggcgg
      661 cgacggtcac tatcacggcg tcaccgacgc caacggccag ttttcgctgg cgctgaccca
      721 ggacaagggc gctggcgtat taaccccggt gcgcgtggtg ctgttcgacg gcacggaagc
      781 gacgcagaat gtgattttta ccgtcgtcac cagcccggac gtgacgcagg cccgtatgtg
      841 gggccatatg cagggcgtgg tggaagcggg caatatttac aaacgtccgc tgctggcgga
      901 agaggccgcg caggataccg gttccgaatt tgagaataac gagtactggg ccacgtttaa
      961 ctcagtgacg gcagcgacaa accagtgcgg cgcaggccag gtgccgggac aactgctgct
     1021 ggatacgctg tatgaagccc attccggcaa tacgatggaa acgacttacg gctggccgac
     1081 acagaaacat agctatattg cggcggatac cgatggttcc accactgcgc acgttaacct
     1141 ggcgaccggc gcggacagcc tgttcagcgg cgctgaaccg aactatctct cctgctccgg
     1201 taacgagttg gtgaccagcc tggacgtgta ctttgatggc aacgagtcgt tacgtaatgc
     1261 ggtagccaaa gtgggcgaaa aaattacgat gaacgtccat tccgtcaacg cgctgaacgg
     1321 gttaagcgtg cccaacgcca gctttaccgt caccatgtcg cacggtaaaa atcgcgccaa
     1381 cgccaccacg ggctttaccg atcccagcga cggaacgctg gtgatgggcg gaacgtcttt
     1441 cggctcttcc ctggcgtcga tgacgtacca gggcatgacc gatgccgcag gcaacgccac
     1501 gctggtcatt gaacaaccgc agggtgtcgg cttgctgacg ccgctgaccg tactgccggt
     1561 taactcgctg atcaccaccc ccgttaaccg cagcgtgaag tttaccgttc ccaccagccc
     1621 cgatacgccg gatgcgcaaa tgtggggcca tatgtccgac gccatcacgg tgggcgatat
     1681 gacctttga
//
LOCUS       DAGWFR010000364         1688 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.371, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000364 DAGWFR010000000
VERSION     DAGWFR010000364.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1688)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1688)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1688
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.371"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..119
                     /locus_tag="MOX77_004748"
     CDS             <1..119
                     /locus_tag="MOX77_004748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hydroxyethylthiazole kinase"
                     /protein_id="HCA3360109.1"
                     /translation="MKLAGQVAAERSEGPGSFIPAFLDALYHLDMEAANATN"
     gene            106..906
                     /gene="thiD"
                     /locus_tag="MOX77_004749"
     CDS             106..906
                     /gene="thiD"
                     /locus_tag="MOX77_004749"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HCA3360110.1"
                     /translation="MQRINALTIAGTDPSGGAGIQADLKTFSALGAYGCSVITALVAQ
                     NTCGVQSVYRIEPDFVAAQLDSVFSDVRIDTTKIGMLAETDIVEAVAERLQRHHVRNV
                     VLDTVMLAKSGDPLLSPSAIETLRVRLLPQVSLITPNLPEAAALLDAPHARTEQEMLA
                     QGRALLAMGCEAVLMKGGHLEDAQSPDWLFTREGEQRFSAPRVNTKNTHGTGCTLSAA
                     LAALRPRHRCWGETVNEAKAWLSAALAQADTLEVGKGIGPVHHFHAWW"
     gene            942..1688
                     /locus_tag="MOX77_004750"
     CDS             942..1688
                     /locus_tag="MOX77_004750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HCA3360111.1"
                     /translation="MEQAHTRLIAQLNERISAADNTPLYMKFAQTVKDAVRSGILEHG
                     NILPGERDLSQLTGVSRITVRKAMQALEEEGVVTRARGYGTQINNIFEYSLKEARGFS
                     QQVVLRGKKPDTLWVNKRVVSCPDEVAQHLAIPAGSDVFLLKRIRYVDEDAVSIEESW
                     VPAHLIHDVDAIGISLYDYFRRQHIYPQRTRSRVSARMPDDEFQSHIQMDGKVPVLVI
                     KQVALDQQQRPIEYSISYCRSDLYVFVCEE"
BASE COUNT          366 a          424 c          535 g          363 t
ORIGIN      
        1 ggatgaaact ggctggacag gtcgcggcag agcgtagcga aggaccgggc agcttcatcc
       61 cggcttttct tgatgcgctc tatcatctgg atatggaggc ggccaatgca acgaattaac
      121 gcgctgacga ttgccggcac cgatcccagc ggcggggccg gtatccaggc ggatctcaag
      181 accttttccg cgctgggcgc atatggctgt tcggtcatca ccgcgctggt ggcgcaaaat
      241 acctgtggcg tacagtcggt gtaccggata gagccggact ttgtcgccgc tcaacttgat
      301 tccgtgttca gcgatgtgcg cattgatacc acaaaaatcg ggatgctggc ggaaaccgat
      361 attgtcgagg ccgtggcgga gcgactacag cgtcatcatg tacgtaatgt ggtgctggat
      421 acggtgatgc tggcgaaaag cggcgatccg ctgctctcgc cctctgcgat agaaacatta
      481 cgcgtccggc tgttgccaca ggtatcgctg attacgccta atttgccgga agccgcagcg
      541 ttgctggatg cgccccatgc acgtacggaa caggagatgc tggcgcaggg gcgggcgtta
      601 ctggcgatgg ggtgtgaagc ggtattgatg aaaggcgggc atttagagga tgcgcaaagc
      661 ccggactggc tctttacccg tgagggcgag caacgtttta gcgcgccgcg tgtgaacacc
      721 aaaaatacgc atgggacggg ctgtacgctg tcggcggcgc tggcggcgtt acggccccgg
      781 catcgctgtt ggggagagac ggtaaacgag gcgaaggcat ggctttcggc ggcgctggcg
      841 caggcggaca cgctggaagt ggggaagggc attggtccgg tacatcattt ccacgcgtgg
      901 tggtagtata ctgcctacag acccgtcgtc aggaaagata aatggaacaa gcgcataccc
      961 ggctcatcgc gcaactgaat gaacgaattt cagcggcgga taatacgccg ctatacatga
     1021 aattcgccca gacggtaaag gatgccgtgc gcagcggtat tcttgagcac ggtaatattt
     1081 tgcctggcga acgcgatctc agccagctta ccggcgtctc gcgcatcacg gtacgaaaag
     1141 cgatgcaggc gctggaagaa gagggggtcg tcacgcgcgc ccgcggctac ggtacgcaaa
     1201 tcaataatat ctttgaatat tccctgaaag aggcgcgggg attttctcag caggttgtct
     1261 tgcgcggcaa aaaaccggat acgctatggg ttaacaaacg cgtggtaagt tgtccggatg
     1321 aggtcgcgca gcatctggcg atccccgcag gcagcgacgt ctttttactc aaacgcattc
     1381 gttatgttga tgaggacgcg gtatcgattg aagagtcctg ggtgcccgcg catctgattc
     1441 atgatgtcga cgcgattggc atttcgctgt atgactattt tcgtcgccag cacatttacc
     1501 ctcagcgtac ccgatcccgc gtcagcgccc ggatgccgga tgatgagttt cagtcgcata
     1561 ttcaaatgga tggtaaagtg ccggtgctgg tgattaagca ggtggcgctc gatcagcagc
     1621 agcggcctat tgaatacagc atcagttatt gtcgtagcga cctatacgtt tttgtgtgcg
     1681 aggagtag
//
LOCUS       DAGWFR010000365         1680 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.372, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000365 DAGWFR010000000
VERSION     DAGWFR010000365.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1680)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1680)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1680
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.372"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..237
                     /locus_tag="MOX77_004751"
     CDS             <1..237
                     /locus_tag="MOX77_004751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461052.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose mannosyl hydrolase"
                     /protein_id="HCA3360112.1"
                     /translation="TFYGVWQHFYDDNFSSEDFSTHYIVLGFRLRVAESDLRLPDAQH
                     GSYRWLTPEQLLAGDNVHENSRAYFSPDAPAVGL"
     gene            234..1457
                     /gene="wcaI"
                     /locus_tag="MOX77_004752"
     CDS             234..1457
                     /gene="wcaI"
                     /locus_tag="MOX77_004752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis fucosyltransferase
                     WcaI"
                     /protein_id="HCA3360113.1"
                     /translation="MKILVYGINYSPELTGIGKYTGEMVAWMAREGHEVRVITAPPYY
                     PQWKVGERYSAWRYRREEGEATVWRCPLYVPKQPSTLKRLLHLGSFALSSFFPLMAQR
                     RWKPDRIIGVVPTLFCTPGMRLLATLSGARTVLHIQDYEVDAMLGLGMAGKGKRGSVA
                     RLATAFERSALRNVDNVSTISRSMMNKAREKGVAAEKILFFPNWSEVARFQDVNDADV
                     TALRQQLGLPEGKKIVLYSGNIGEKQGLEKVIDAAERLRDRPLIFAIVGQGGGKARLE
                     NMARERGLLNIKFLPLQPYDALPALLKMGDCHLVVQKRGAADAVLPSKLTNILAVGGN
                     AVITAEPHTELGQLCARYPGIAVCVEPESTDALVDGISQALAMPKNNTTAREYAERTL
                     NKENVLRQFIADIRG"
     gene            1460..>1680
                     /gene="cpsB"
                     /locus_tag="MOX77_004753"
     CDS             1460..>1680
                     /gene="cpsB"
                     /locus_tag="MOX77_004753"
                     /EC_number="2.7.7.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310881.1"
                     /note="capsular polysaccharide colanic acid biosynthesis
                     protein; catalyzes the formation of GDP-mannose from GTP
                     and alpha-D-mannose 1-phosphate; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-1-phosphate
                     guanylyltransferase/mannose-6-phosphate isomerase"
                     /protein_id="HCA3360114.1"
                     /translation="MRQTKLYPVVMAGGSGSRLWPLSRVLYPKQFLCLKGDLTMLQTT
                     ICRLNGVECESPVVICNEQHRFIVAEQLR"
BASE COUNT          357 a          455 c          504 g          364 t
ORIGIN      
        1 acgttttatg gcgtctggca gcacttctat gacgacaact tttccagtga ggatttttca
       61 actcactaca tcgtgctcgg ctttcgtctg cgcgtggcgg agagcgattt acgcctgcct
      121 gatgcccagc atggcagtta ccgctggctg acgccggaac agcttctggc aggcgacaat
      181 gttcatgaga acagtcgggc ctacttctct cctgacgcgc cggcggtggg cctatgaaga
      241 tcctggtcta tggcattaac tattcaccgg aactgaccgg tatcggcaaa tataccggcg
      301 aaatggtggc gtggatggcg cgggaaggcc atgaggtgcg ggttattact gcgccgccgt
      361 actacccgca gtggaaggtc ggtgagcgct attccgcctg gcgctatcgc cgggaagagg
      421 gcgaggctac cgtctggcgc tgcccgctgt atgtgccgaa acagccctcc accctaaaac
      481 gactgcttca tctggggagc tttgcattga gcagtttttt cccactgatg gcgcagcgtc
      541 gctggaagcc ggatcggatt atcggcgttg taccgacgct cttttgtacg ccgggaatgc
      601 gtctgctggc gacactctcc ggcgcgcgta ccgtactgca tattcaggat tacgaagtgg
      661 acgccatgct cggcttagga atggcgggaa aaggcaagcg cggcagcgta gcgcggttag
      721 cgacggcctt tgaacgcagc gcgctgcgta acgttgataa tgtttcgacc atctctcgct
      781 ccatgatgaa taaagcgcgg gaaaagggcg tcgcggcgga aaaaatcctc ttttttccaa
      841 actggtcgga agtggcgcgc tttcaggacg ttaatgacgc tgacgtgacg gctttgcgtc
      901 agcagcttgg cttgccagag ggcaaaaaaa tcgtgctcta ttccggcaat atcggcgaaa
      961 aacaagggct ggaaaaggtg attgacgccg cagaacgatt acgcgatcga ccgttgattt
     1021 ttgcgattgt cggccagggg ggcggcaagg cgcggctgga gaacatggcc cgcgaacgcg
     1081 gcctgctaaa tattaaattc ctcccgctgc agccttacga cgccttaccc gcgctgctga
     1141 aaatgggcga ctgccatctg gtggtgcaaa agcgcggcgc agcggatgcg gtactgccct
     1201 ccaagctgac taacattctg gcggtcggcg gtaatgcggt gattaccgct gagccgcaca
     1261 ccgaattagg acaactttgc gcgcgctatc cgggcatcgc cgtttgcgtg gagccggagt
     1321 cgaccgacgc gctggtcgac gggattagcc aggcgctcgc catgccgaaa aacaacacga
     1381 cggcacgtga atacgccgaa cgcacgctca ataaagagaa cgtgctacgc caatttattg
     1441 cagatattcg gggatgataa tgcgtcagac aaaactttac ccggttgtga tggccggtgg
     1501 ctccggtagc cgattgtggc cgctttctcg cgtgctttat ccaaaacagt ttttgtgcct
     1561 gaaaggcgat ctcaccatgt tgcaaaccac catttgccgt ctgaacggcg tggagtgcga
     1621 aagcccggtg gttatctgca acgaacagca ccgttttatc gtcgccgaac agctccgcca
//
LOCUS       DAGWFR010000366         1671 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.373, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000366 DAGWFR010000000
VERSION     DAGWFR010000366.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1671)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1671)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1671
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.373"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(86..184)
                     /locus_tag="MOX77_004754"
     CDS             complement(86..184)
                     /locus_tag="MOX77_004754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YoaK family small membrane protein"
                     /protein_id="HCA3360115.1"
                     /translation="MRVGVLFPVVIFITAILFLAWFFIGGYAAPGA"
     gene            380..631
                     /locus_tag="MOX77_004755"
     CDS             380..631
                     /locus_tag="MOX77_004755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF333 domain-containing protein"
                     /protein_id="HCA3360116.1"
                     /translation="MKFTWIALPGVLLLSACSSSQPNAPRPPRIGMPNPAAVYCEQQG
                     GTLMPVQTPQGVRSDCKLPNGEIIDEWALWRREHPDTKK"
     gene            700..1011
                     /locus_tag="MOX77_004756"
     CDS             700..1011
                     /locus_tag="MOX77_004756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3360117.1"
                     /translation="MFQLKPGALAIVIGAKTPAGRRNIGKSVELFCLCQPGDEFINPV
                     NGHVTLLPKEAPRALWLVTGDVASADGQHGFAWVRAEHLMPLSPDRQPGQAAARQSQL
                     S"
     gene            complement(997..1344)
                     /locus_tag="MOX77_004757"
     CDS             complement(997..1344)
                     /locus_tag="MOX77_004757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF488 domain-containing protein"
                     /protein_id="HCA3360118.1"
                     /translation="MRIQCKRVYFPAEKDDGYRVLVDRLWPRGIKKAALVYDEWNKAI
                     TPSTELRKAFHSELIDFNHFAQQYRAELAQQHQEGKRLADIARHQPLTLLYAAKDTRQ
                     NHAIVLAEWLREL"
     gene            complement(1463..>1671)
                     /locus_tag="MOX77_004758"
     CDS             complement(1463..>1671)
                     /locus_tag="MOX77_004758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3360119.1"
                     /translation="ASSAHQAAALSGMAQSVGYLLAACGPPVMGKLHDASGSWYLPLS
                     GVTVLAIIMAIFGLYAGRDREIAS"
BASE COUNT          403 a          436 c          443 g          389 t
ORIGIN      
        1 aaatgaattt accaccagcc cagttcggta cccgccaccg caattagcgc gatgcccatc
       61 aacaccatcg ttgttttcct catggttatg ctcccggtgc ggcgtaaccg ccaataaaaa
      121 accatgccaa aaataatatt gccgtaatga aaatgacgac agggaagagg acacccactc
      181 tcatgctatt accttcactg ttcagggggc gccagaatag cagggttttc tcagcgacaa
      241 aaggttggtt gctttgtgac agggcgtggc tattgctgac ttaacccggg ataaacaccc
      301 actaaagcgc tgacagaaag tatggaaata gcgtacccgc caggttatcc tggacaaaat
      361 atcgctttaa ggagtcgtta tgaaatttac gtggattgcg ttgccaggcg tattgctgct
      421 gagcgcttgt tcatcgtcgc aacccaacgc ccccaggccg ccgcgtattg ggatgcctaa
      481 tccggcagcc gtctactgtg agcaacaggg cggtacgctg atgccggtgc agaccccaca
      541 aggcgtgcgt tccgattgca aattgcccaa tggcgaaatc attgatgagt gggcattatg
      601 gcgcagagag caccctgata cgaaaaagtg acaacctgcg gtccgacggg atatgattaa
      661 gaacaatctg ataatgagtt tcatgcggcg caagaaaata tgtttcagtt aaagccgggc
      721 gcgttggcaa tagttattgg cgctaagaca cccgccggac ggcggaatat tggtaaatcg
      781 gttgagctat tttgcctgtg ccaacccgga gatgaattca ttaatccggt aaatggacac
      841 gtcaccttac tgccgaaaga agcgcctcgg gcgctgtggc tggttacggg cgacgtagcc
      901 tccgccgatg gtcagcacgg ttttgcctgg gtgcgagcag aacatttgat gccgttgtcc
      961 ccggacagac aaccaggcca ggcggcggca cgacaatcac agctctcgta gccactctgc
     1021 cagcacaatg gcatggttct ggcgagtatc tttagcggcg tatagcaacg ttagcggttg
     1081 gtgtcgggca atatccgcca gacgtttgcc ttcttgatgc tgttgcgcaa gttctgcccg
     1141 gtattgctgc gcgaagtggt taaaatcaat cagttcgcta tgaaaggctt tgcgcaattc
     1201 ggtggagggc gtaatggcct tattccattc atcatagacc agcgctgctt ttttaatgcc
     1261 tcgcggccat agcctgtcaa ccaatacccg ataaccatcg tctttttccg ccgggaaata
     1321 gacgcgctta cactggattc gcatttttcc ctcctgtgat ggtgtcgctt acggtacttt
     1381 tgtcggatag cagtaatgat tttaatggat caggcctgat aaacgaagcg tcatcaggca
     1441 ttcaagtggg tatcaggttt atttatgacg ctatctctcg atcgcgtccg gcgtagaggc
     1501 cgaaaatcgc catgatgata gccagaaccg ttacgcccga tagcggcaga taccagctac
     1561 cgctggcatc atgaagtttt cccatgacgg gcggcccaca tgccgccagt aaatacccga
     1621 ccgactgcgc catgccggaa agcgccgccg cctgatgcgc cgaactggcg c
//
LOCUS       DAGWFR010000367         1670 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.374, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000367 DAGWFR010000000
VERSION     DAGWFR010000367.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1670)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1670)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1670
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.374"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..404
                     /locus_tag="MOX77_004759"
     CDS             <1..404
                     /locus_tag="MOX77_004759"
                     /EC_number="2.7.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459108.1"
                     /note="catalyzes the phosphorylation of ribulose to
                     ribulose 5-phosphate; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ribulokinase"
                     /protein_id="HCA3360120.1"
                     /translation="GARAIQECFTEQGIAVNNVMALGGIARKNQVIMQVCCDVLNRPL
                     QIVASDQCCALGAAIFAAVAAKVHADIPAAQQSMASAVERTLRPRPEQAQRFERLYRR
                     YQQWALSAEQHYLPTAAPAPTTPANQAILTH"
     gene            415..>1670
                     /gene="araA"
                     /locus_tag="MOX77_004760"
     CDS             415..>1670
                     /gene="araA"
                     /locus_tag="MOX77_004760"
                     /EC_number="5.3.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-arabinose isomerase"
                     /protein_id="HCA3360121.1"
                     /translation="MTIFDNYEVWFVIGSQHLYGAETLRQVTQHAEHVVNALNTEAKL
                     PCKLVLKPLGTSPDEITAICRDANYDDRCAGLVVWLHTFSPAKMWINGLSILNKPLLQ
                     FHTQFNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHAVVTGHWQDKEAHTRI
                     GAWMRQAVSKQDTRQLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVV
                     NSIGDGDISALIDEYESSYTLTPATQIHGDKRQNVREAARIELGMKRFLEQGGFHAFT
                     TTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMED
                     YTDHFEKGNDLVLGSHMLEVCPSIAVEEKPILDVQHLGIGGKEDPARLIFNTQTGPAI
                     VASLIDLGDRYRLLVNCIDTVKTPHSL"
BASE COUNT          377 a          485 c          465 g          343 t
ORIGIN      
        1 tcggcgcgcg cgccattcag gagtgtttta ccgagcaggg tatcgcggtc aataacgtga
       61 tggcgcttgg cggcatcgcc cgtaaaaatc aggtcattat gcaggtctgc tgcgacgtac
      121 tgaatcgtcc gttgcagatc gtcgcttccg accaatgttg cgcattaggc gccgctatct
      181 ttgccgccgt tgccgcgaaa gtccatgccg atattcctgc cgcccagcaa agcatggcga
      241 gcgcggtaga acgcactctg cgtccccgcc ctgaacaggc gcaacgcttc gaacggcttt
      301 accgccgcta ccagcagtgg gcgctaagcg cagaacaaca ttatcttccg actgccgcgc
      361 cggcgccaac gaccccggcc aatcaggcaa tcctgactca ttaaggacac gacaatgacg
      421 atttttgata attatgaagt atggtttgtg attggcagcc agcatttgta tggcgcagaa
      481 accctgcgcc aggtcaccca acatgccgag catgtggtca acgcgctgaa taccgaagcc
      541 aaactgccat gtaaactggt attaaaaccg ctgggcacct cgccggatga gattaccgcc
      601 atttgtcgtg acgccaatta tgacgatcgc tgcgcggggc tggtggtctg gctgcacacc
      661 ttctccccgg ccaaaatgtg gatcaacggg ctgagtatcc ttaacaaacc actactgcaa
      721 ttccataccc aatttaacgc cgccctgccg tgggacagca tcgatatgga ctttatgaac
      781 ctgaaccaga ctgcgcatgg cggccgagag ttcggtttta tcggcgcgcg gatgcgccag
      841 cagcacgcgg tcgtcactgg ccactggcag gataaagagg cccatacgcg tatcggcgcc
      901 tggatgcgcc aggcggtctc taaacaggat acccgccagc taaaagtctg ccgcttcggc
      961 gacaatatgc gtgaagtcgc agtgactgac ggtgataaag tggccgcgca aatcaaattt
     1021 ggcttttcgg tcaatacctg ggcggtcggc gatctggtgc aggtggtgaa ttctatcggc
     1081 gacggcgata tcagcgctct gattgacgag tatgaaagca gctataccct gacgcccgcc
     1141 acccagatcc acggcgataa acgccagaac gtgcgggaag cggcgcgcat tgaactgggg
     1201 atgaagcgtt tcctggaaca gggcggcttc cacgcattca ctactacttt tgaagattta
     1261 cacggtctga aacaacttcc gggtctggcc gtacagcgtc tgatgcagca gggctacggc
     1321 tttgcgggcg aaggcgactg gaaaaccgcc gctctgcttc gcattatgaa agtgatgtca
     1381 accggtctgc agggcggcac ctcatttatg gaggattaca ctgaccactt cgagaaaggc
     1441 aacgatctgg tgctcggctc gcacatgctg gaagtgtgtc cctccatcgc ggtggaagag
     1501 aaaccgatcc tcgacgtcca gcacctcggc attggcggca aggaagatcc ggcgcgtttg
     1561 attttcaata cccaaaccgg cccggcgatc gtcgccagcc tgatcgacct cggcgatcgt
     1621 taccgcctgc tggtcaactg cattgacacc gtaaaaacgc cgcactccct
//
LOCUS       DAGWFR010000368         1588 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.375, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000368 DAGWFR010000000
VERSION     DAGWFR010000368.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1588)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1588)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1588
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.375"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..1218
                     /gene="malQ"
                     /locus_tag="MOX77_004761"
     CDS             <1..1218
                     /gene="malQ"
                     /locus_tag="MOX77_004761"
                     /EC_number="2.4.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000428711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-alpha-glucanotransferase"
                     /protein_id="HCA3360122.1"
                     /translation="SLYWQAAFDALHAYQVKEDGQRWGWPAWPEAYQSVESPAVKQFC
                     EAHREEVEFYLWLQWLAWRQFAACWDTCQSFKLPIGLYRDLAVGVAEGGAETWCDREL
                     YCLKASVGAPPDILGPLGQNWGLPPMDPHIIVARAYEPFIDLLRANMQNCGALRIDHV
                     MSLLRLWWIPYDETADQGAYVHYPVDDLLSILALESQRHRCMVIGEDLGTVPVEIVGK
                     LRDSGVYSYKVLWFENDLEKNFRAPGAYPQQSMAVASTHDLPTLRGYWECGDLTLGKA
                     LGLYPDEVILRGLYEDRERAKQGLLDALHKYGCLPKRAGHKALLMSMTPTLNRGLQRY
                     IADSNSGLLGLQPEDWLDMADPVNVPGTSDQYKNWRRKLSASLEAMFADEGVNKLIKD
                     LDKRRKAAAKKKK"
     gene            complement(1337..>1588)
                     /locus_tag="MOX77_004762"
     CDS             complement(1337..>1588)
                     /locus_tag="MOX77_004762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate transporter"
                     /protein_id="HCA3360123.1"
                     /translation="VAAITAGGIAAPLIATTGVSPELMVIAVGSGSVIFSHVNDPGFW
                     LFKEYFNLTIGETIKSWSMLETIISVCGLIGCLLLGMVV"
BASE COUNT          348 a          412 c          491 g          337 t
ORIGIN      
        1 agcctttact ggcaggcggc attcgacgcg ctgcatgcgt atcaggtgaa agaggatggg
       61 cagcgctggg gctggccagc ctggccggag gcgtaccagt cggtagagtc tcccgctgta
      121 aaacaattct gtgaagcgca ccgcgaagag gtggagtttt atctctggct tcagtggctg
      181 gcctggcgcc aattcgccgc ctgctgggat acctgccaga gttttaaact accgattggt
      241 ctgtaccgcg atctggcggt tggcgtagcg gaaggcggcg cggaaacctg gtgcgaccgg
      301 gagctgtact gcctgaaagc atctgtcggc gcgccgccgg atatcctcgg cccgctcggt
      361 cagaactggg ggctgccgcc gatggacccg catatcattg tcgcccgggc gtatgagccc
      421 tttatcgacc tgctgcgcgc caatatgcaa aactgcggcg cgttgcgcat tgaccatgtc
      481 atgtcgttgc tgcgcctgtg gtggataccg tatgacgaaa cagcggatca gggggcttac
      541 gtccattatc cggtagatga tttgctttct attctggcgc tggagagcca acgtcaccgc
      601 tgtatggtga taggcgaaga tctggggacg gtgccagttg agattgtcgg caagctgcgc
      661 gatagcgggg tctattctta taaagtgctg tggtttgaaa atgaccttga gaaaaacttc
      721 cgcgcgccag gcgcatatcc gcaacaatcg atggctgtcg cctcgacgca cgatctcccc
      781 acgctgcgcg gctattggga atgcggtgac ctgacgttgg gtaaagctct ggggctttat
      841 ccggatgaag tgattctgcg cgggctgtat gaggatcgcg agcgggcgaa acaggggcta
      901 ttggacgcgc tgcataaata tggctgtctg ccaaaacgcg ccgggcataa ggcattgtta
      961 atgtcgatga cgccaacgct aaatcgcgga cttcagcgct atatcgccga cagtaacagc
     1021 ggtctgttgg ggcttcagcc ggaggactgg ctggatatgg ccgatccggt taacgtaccg
     1081 ggcaccagcg atcagtataa aaactggcgg cggaaattgt ctgcatctct tgaggctatg
     1141 tttgccgatg agggcgtaaa caagctgatt aaggatttgg ataagcgccg aaaagcggcc
     1201 gcgaagaaga agaagtaata aagccgggga tttccccggc tttatgatgg tgagagcacg
     1261 taggcctgat aagcgcagcg ccatcaggca attctggcgc acattgctgc cttatccggc
     1321 ctgcaaaccg cctcgcttaa accaccatac ccagtagcag acagccgatc aggccgcaga
     1381 cggagatgat cgtttccagc atcgaccagg atttaatggt ctcgccgata gtcaaattga
     1441 aatactcttt gaacagccag aagcctgggt cgttgacgtg agagaaaatc acgctcccgg
     1501 aaccgactgc gataaccatc agttcaggac taacgccggt cgtggcgatc agtggcgccg
     1561 caatgccgcc tgcggtaatc gccgcgac
//
LOCUS       DAGWFR010000369         1562 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.376, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000369 DAGWFR010000000
VERSION     DAGWFR010000369.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1562)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1562)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1562
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.376"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..579
                     /gene="mreB"
                     /locus_tag="MOX77_004763"
     CDS             <1..579
                     /gene="mreB"
                     /locus_tag="MOX77_004763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000913396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreB"
                     /protein_id="HCA3360124.1"
                     /translation="SEATGSMVVDIGGGTTEVAVISLNGVVYSSSVRIGGDRFDEAII
                     NYVRRNYGSLIGEATAERIKHEIGSAYPGDEVREIEVRGRNLAEGVPRGFTLNSNEIL
                     EALQEPLTGIVSAVMVALEQCPPELASDISERGMVLTGGGALLRNLDRLLMEETGIPV
                     VVAEDPLTCVARGGGKALEMIDMHGGDLFSEE"
     gene            644..>1562
                     /gene="mreC"
                     /locus_tag="MOX77_004764"
     CDS             644..>1562
                     /gene="mreC"
                     /locus_tag="MOX77_004764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HCA3360125.1"
                     /translation="MKPIFSRGPSLQIRLILAVLVALGVIIADSRLGTFSQIRTYMDT
                     AVSPFYFISNGPRELLDSVSQTLASRDQLELENRALRQELLLKNSDLLMLGQYKQENA
                     RLRELLGSPLRQDEQKMVTQVISTVNDPYSDQVVIDKGSVNGVYEGQPVISDKGVVGQ
                     VVAVAKLTSRVLLICDATHALPIQVLRNDIRVIAAGNGCTDDLQLEHLPANTDIRVGD
                     VLVTSGLGGRFPEGYPVAVVSSVKLDTQRAYTVIQARPTAGLQRLRYLLLLWGADRNG
                     ANPMTPEEVHRVANERLMQMMPQVLPSPDA"
BASE COUNT          314 a          414 c          475 g          359 t
ORIGIN      
        1 tctgaagcaa ccggttcaat ggttgtggat atcggtggtg gtaccactga agttgccgtg
       61 atctccctga acggcgtggt ttactcttct tctgtccgta ttggtggtga ccgcttcgac
      121 gaagccatca ttaattacgt tcgtcgtaac tacggttctc tgattggtga agccaccgca
      181 gaacgtatta aacacgaaat cggttccgct tatccgggcg acgaagtccg cgagatcgaa
      241 gtgcgtggcc gtaacctggc ggaaggcgtt ccacgcggct ttaccctgaa ctcaaacgag
      301 attctggaag cgttgcagga accgttgacc ggtatcgtca gcgcggtaat ggtggcgctg
      361 gaacagtgtc cgccggagct ggcgtcagac atctccgagc gcggtatggt gctcaccggc
      421 ggcggcgcgc tgctgcgtaa ccttgaccgt ctgttaatgg aagagacggg cattcctgtc
      481 gtggttgctg aagatccgct gacctgtgtg gcgcgcggcg gcggcaaggc gctggaaatg
      541 atcgatatgc acggcggcga cctgttcagc gaagagtagt tggatacggg caggattatc
      601 cctggattgt cctgcctctc cgacgcgaga atacgcatag cctatgaagc caatttttag
      661 ccgtggcccg tcgctacaga ttcgccttat tctggcggtg ctggtggcgc tcggcgttat
      721 cattgccgac agccgcctgg ggacgttcag tcaaatccga acgtacatgg acactgccgt
      781 cagtcctttc tattttattt caaacggccc tcgtgaactg ctcgacagcg tgtcgcaaac
      841 gctggcttct cgcgaccagc ttgagctgga aaaccgggcg ctgcgccagg aattactgct
      901 aaaaaacagc gacctgctga tgctggggca gtacaaacag gagaacgcgc ggttgcgcga
      961 gctgctgggg tcgccgctgc gtcaggacga gcagaaaatg gtgacgcagg ttatttcaac
     1021 ggttaacgat ccttacagcg atcaggtcgt tatcgataaa ggcagcgtta atggcgtata
     1081 tgaaggtcaa ccggtcatta gcgacaaagg tgtcgtaggg caggttgtcg ccgtggcgaa
     1141 actgaccagc cgcgtattgc tgatttgcga tgcgactcat gctctgccga ttcaggtact
     1201 acgcaatgac atccgcgtga ttgccgccgg taacggctgc actgacgatc ttcagcttga
     1261 acatctgccc gccaataccg atattcgcgt tggcgatgtg ctggtaacgt ccggacttgg
     1321 tgggcgtttc ccggaagggt atccggtggc ggtggtctcc tccgtcaagc tggacactca
     1381 gcgcgcctat accgtcattc aggctcgtcc aaccgcgggt ttgcagcgtt tacgctatct
     1441 gctgctgttg tggggagccg atcgtaacgg cgccaatccg atgacgccgg aagaggttca
     1501 ccgcgtcgcc aatgagcgcc tgatgcagat gatgccgcag gtgttacctt ctccggatgc
     1561 ga
//
LOCUS       DAGWFR010000370         1538 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.377, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000370 DAGWFR010000000
VERSION     DAGWFR010000370.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1538)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1538)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1538
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.377"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..566)
                     /locus_tag="MOX77_004765"
     CDS             complement(<1..566)
                     /locus_tag="MOX77_004765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HCA3360126.1"
                     /translation="MKTDTSTFLAQQIVRLRRRDQIRRLMQRDKTPLAILFMAAVVGT
                     LTGLVGVAFEKTVSWVQNMRIGALVQVADHAFLLWPLAFILSALLAMVGYFLVRKFAP
                     EAGGSGIPEIEGALEELRPVRWWRVLPVKFIGGMGTLGAGMVLGREGPTVQIGGNLGR
                     MVLDVFRMRSAEARHTLLATGAAAGLSAA"
     gene            736..>1538
                     /locus_tag="MOX77_004766"
     CDS             736..>1538
                     /locus_tag="MOX77_004766"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020233394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HCA3360127.1"
                     /translation="MSKSENLYSAARELIPGGVNSPVRAFTGVGGTPLFIEKADGAYL
                     YDVDGKAYIDYVGSWGPMVLGHNHPAIRNAVIEAAERGLSFGAPTEMEVKMAELVTNL
                     VPTMDMVRMVNSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTL
                     GQPNSPGVPADFAKHTLTCTYNDLTSVRAAFEQYPQEIACIIVEPVAGNMNCVPPLPE
                     FLPGLRALCDEFGALLIIDEVMTGFRVALAGAQDYYGVVPDLTCLGKIIG"
BASE COUNT          350 a          464 c          411 g          313 t
ORIGIN      
        1 gccgcagaga gccccgccgc cgcgccggtc gccagcaacg tatgccgcgc ttcggcgctg
       61 cgcatacgaa aaacatccag caccatgcgc cccaggttgc ccccgatttg caccgttggc
      121 ccttcgcgcc ctaataccat tcctgcgccc aacgttccca tcccgccgat aaacttcacc
      181 ggcaacacgc gccaccagcg caccggacgt aactcctcca gcgcgccttc aatttccggg
      241 atacccgagc cgccggcttc cggcgcaaat tttcgcacca aaaaatagcc gaccatcgcc
      301 agtaacgccg aaaggataaa ggccagcggc caaagcaaaa acgcatggtc cgcgacctga
      361 accagcgcgc caatgcgcat gttttgtacc caggaaaccg tcttttcaaa ggcgacgcca
      421 accagtccgg taagcgtgcc gacaacggcc gccatgaaca ggatggccag cggcgtttta
      481 tcccgctgca ttaaccgacg aatctgatct ctgcgccgta agcgcacaat ttgctgagct
      541 aaaaaggtgg aagtgtctgt tttcatcaga agatcattaa ttggtaatac aaatctaaag
      601 tcggcattct actcgccaac gccgtgaaaa tcccctgcaa atcgtattgt ttcaaatgcg
      661 taaaactttc ataaccttct ctgaataact tagaatagcg ggtattcact ttttctacga
      721 accaggaatc tttccatgag taagtctgaa aatctctata gcgcggcccg cgagctgatc
      781 cccggcggcg tgaactcccc tgttcgcgcc ttcactggcg tgggcggcac cccgctgttt
      841 atcgaaaaag cggacggcgc gtatctgtac gatgtcgatg gcaaagcata tatcgactat
      901 gtcggttcct gggggccaat ggtactgggg cataaccatc cggctatccg caatgcggtg
      961 atcgaagctg cggagcgcgg tttaagcttc ggcgcgccaa ccgaaatgga agtaaaaatg
     1021 gcggaactgg tgaccaacct ggtgccgacc atggacatgg tgcgcatggt gaactccggc
     1081 accgaagcga cgatgagcgc gattcgcctg gcgcgtggtt ttactggccg cgataagatt
     1141 atcaaattcg aaggctgcta ccacggccac gcagactgtc tgctggtcaa agccggttct
     1201 ggcgcgctga cgctcggtca gccgaactcg ccgggcgtgc cggcagattt cgcgaaacat
     1261 acgctgacct gcacttataa cgatctgacg tcagtgcgcg cggcgtttga acaatatccg
     1321 caggaaatcg cctgtatcat cgtcgaaccc gtggcgggca atatgaactg cgtcccgccg
     1381 ctgccggaat tcctgccggg cctgcgtgcc ttgtgcgatg agttcggcgc gctgctgatt
     1441 atcgacgaag taatgaccgg ttttcgcgta gcgctggccg gagcccagga ttactacggc
     1501 gtcgtgccgg acctgacctg tctgggtaaa atcatcgg
//
LOCUS       DAGWFR010000371         1534 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.378, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000371 DAGWFR010000000
VERSION     DAGWFR010000371.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1534)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1534)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1534
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.378"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..1507
                     /locus_tag="MOX77_004767"
     CDS             <1..1507
                     /locus_tag="MOX77_004767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HCA3360128.1"
                     /translation="KRNIAEEIPVWKEELCTQCNHCVAACPHSAIRAKVVSPQAMENA
                     PASLHSLDVKSRDMRGQKYVLQVAPEDCTGCNLCVEVCPAKDRQNPQIKAINMMSRLE
                     HVEEEKVNYDFFLDLPEIDRSKLERIDIRTSQLITPLFEYSGACSGCGETPYIKLLTQ
                     LYGDRMLIANATGCSSIYGGNLPSTPYTTDANGRGPAWTNSLFEDNAEFGLGFRLSVD
                     QHRARVMRLLAQFADRIPAELNDALHAEATPDVRREQVAALRQHLKSVAGAEELLKDA
                     DALVEKSIWLIGGDGWAYDIGFGGLDHVLSLTENVNILVLDTQCYSNTGGQASKATPL
                     GAVTKFGEHGKRKARKDLGVSMMMYGHVYVAQISLGAQLNQTVKAIQEAEAWPGPSLI
                     IAYSPCEEHGYDLALSHDQMRQLTATGFWPLYRFDPRRADEGKPPLALDSRPPSDALA
                     ETLLNEQRFRRLNAQQPEVAEQLWRDAALDLQKRYDFLALLAGKAEKPSAD"
BASE COUNT          369 a          391 c          430 g          344 t
ORIGIN      
        1 aaaacgcaat atcgccgaag agattcctgt ctggaaagag gaactgtgta cacaatgtaa
       61 tcactgcgtc gccgcctgcc ctcactcggc gattcgtgcg aaagtcgttt ccccgcaggc
      121 gatggagaac gcgccagcca gtctgcattc gctggacgtg aagtcccgcg atatgcgcgg
      181 ccagaaatat gtgctgcagg tcgcgccgga agactgtact ggctgtaatt tatgcgtaga
      241 ggtctgcccg gctaaagatc ggcaaaatcc acagatcaag gcgattaaca tgatgtcgcg
      301 ccttgagcat gtggaagaag agaaagtgaa ttatgacttc ttcctcgact tgccggaaat
      361 cgatcgcagc aaactggaac ggattgatat ccgcacatcg cagctcatta cgccgctgtt
      421 tgaatattcc ggcgcctgtt ccggctgcgg tgaaacgccg tatattaaac tgctgactca
      481 gttatatggc gacagaatgt taatcgctaa cgccacgggg tgttcctcta tttacggcgg
      541 taacttaccc tctacgcctt ataccaccga tgccaacgga cgcggcccgg cgtggacgaa
      601 ttcgctattt gaagataacg cggaatttgg cctcggtttc cgtctgagtg tggatcagca
      661 ccgggcgcgc gtcatgcgtt tactggcgca attcgccgat cgcattccgg cggaattaaa
      721 cgatgcgctg catgccgaag caacgcctga cgttcggcgt gaacaggtcg ccgcattacg
      781 ccaacatctg aaatcggttg cgggcgcaga ggaactgtta aaagatgctg atgcgctggt
      841 agaaaaatca atctggctga ttggcggcga tggttgggca tacgacatcg gctttggcgg
      901 tttagaccat gtgttaagcc tgacggagaa tgtcaatatt ctggttctgg atacgcagtg
      961 ttattccaat actggcggcc aggcgtcgaa ggcgacgccg cttggcgccg tcactaagtt
     1021 tggcgaacat ggcaagcgta aagcccgtaa agatcttggc gtcagcatga tgatgtatgg
     1081 tcatgtttat gtcgcgcaaa tttcgctggg cgcgcagtta aaccagacgg tgaaagccat
     1141 ccaggaggcc gaagcctggc caggaccgtc gctgatcatt gcctatagtc cctgtgagga
     1201 acatggctac gatctggcgc taagccatga ccagatgcgc cagttaacgg cgaccggttt
     1261 ctggccgtta taccgctttg atccccgccg tgcggatgaa ggcaagccgc cgctggcgct
     1321 ggactctcgg ccaccgtctg atgccctagc ggaaacgttg cttaatgaac agcgtttccg
     1381 tcgcctgaat gcgcaacagc ctgaagtagc tgaacaatta tggcgagatg ccgcattgga
     1441 tttgcaaaaa cgctatgact ttcttgcctt gctggcagga aaagcggaaa aacccagcgc
     1501 agattaaaaa acattctaag gattaacctg gaaa
//
LOCUS       DAGWFR010000372         1514 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.379, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000372 DAGWFR010000000
VERSION     DAGWFR010000372.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1514)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1514)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1514
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.379"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..1132)
                     /locus_tag="MOX77_004768"
     CDS             complement(<1..1132)
                     /locus_tag="MOX77_004768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HCA3360129.1"
                     /translation="MGFYLTSRIMKNIKSQGNGEQPAISRRHFIQASSALIELPFVSS
                     PATAQARAVTATENRPAEKVVQTCSTFDCGGKCDIRAHVSDGIVTRISTRPDNALDAQ
                     MPVMRACVRGRAYRKFVYHPDRLKYPMKRVGKRGEGKFERISWDEATTLIADNLKSIT
                     EKYGPASRYVHVGTAVSGGTFSGDKMARRLLNLTGGYLESYHSVSMGNTVAATPYTYG
                     IAASGSSLDTLLDTKLVILWGHNPTETIFGHTNYFLQKMKQNGTRFIVVDPRYSDTVS
                     SLADQWIPLLPTTDNALMDAMMYVIISENLYDRAFIARYAIGFDEDSMPEGVPANESL
                     VAYLTGAKDGVVKSPEWAEKITHVPAQTIRQLARDYAKTKPAA"
     gene            complement(1261..>1514)
                     /locus_tag="MOX77_004769"
     CDS             complement(1261..>1514)
                     /locus_tag="MOX77_004769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461466.1"
                     /note="penicillin-insensitive
                     transglycosylase/transpeptidase; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="penicillin-binding protein 1C"
                     /protein_id="HCA3360130.1"
                     /translation="AAPLMLSGVRDGAVIRQLPGQENVTLPVSTTGGKGRRWWFLNGE
                     PVNGENNRLSLLLNIAGRYQLVVMDESGQVAAVNFELIR"
BASE COUNT          371 a          398 c          368 g          377 t
ORIGIN      
        1 acgcggcagg tttggtcttc gcgtaatcac gcgctaactg gcgaatggtt tgcgccggca
       61 catgggtgat cttttccgcc cactcgggag acttaacgac accgtctttg gcgccggtca
      121 gatatgccac cagcgattcg ttagccggta cgccttccgg cattgagtct tcgtcaaaac
      181 cgatagcgta gcgcgcaata aatgcacgat cgtacagatt ctcgctgatg atgacgtaca
      241 tcatcgcgtc catcagcgca ttgtcggtgg tgggcagcag cgggatccac tgatccgcca
      301 gcgacgaaac ggtgtcggaa tagcgcggat caaccacgat aaaccgcgta ccgttctgct
      361 tcatcttctg caagaaatag ttggtatgac caaaaatggt ctccgtcggg ttatggcccc
      421 acagaatcac cagtttggtg tccaaaagcg tatccagcga actgccgctg gcggcaatgc
      481 cgtaagtata aggcgtcgcg gccaccgtgt tgcccatact caccgaatgg tagctttcga
      541 gatagccgcc ggtaagattc agcaggcgac gcgccatttt atcgccggaa aaggtgccgc
      601 cggaaacggc ggtaccaaca tgaacatagc gcgaagccgg gccatatttt tcagtaatcg
      661 attttaaatt atcggcgatt aaggttgtcg cttcatccca ggaaattcgc tcgaactttc
      721 cttcaccgcg ttttcctacg cgcttcatgg gatatttaag tctgtcagga tgataaacaa
      781 atttacggta tgctcgtcca cgaacacagg cacgcatcac cggcatttgc gcatccagcg
      841 cgttatccgg tcgcgttgaa attcgcgtca cgataccgtc actgacatgc gcccgaatat
      901 cgcatttgcc cccgcagtca aaagtgctgc atgtctgaac gactttttcc gcaggcctgt
      961 tttcagttgc cgtcacagcg cgcgcctgag cggtagctgg cgaggagaca aacggtaact
     1021 caataagcgc ggagctggcc tggataaaat ggcggcgaga aatagcgggc tgttcgccat
     1081 ttccctggct ttttatattt ttcatgatcc gactcgtcaa ataaaaaccc attctcacgt
     1141 ttttatgcgt tggttctctt gatatttatc aagctctccg gttatgtatg atccagtaat
     1201 aattaacaat tatcattaag cttaaattaa aaggaattga taatctattt tggagaatgg
     1261 ttaacgtatt aattcaaaat taaccgctgc aacctgaccg gactcatcca ttacgacaag
     1321 ttgataacgt ccagcgatat tgagtaataa agaaaggcga ttattttcgc cattaacagg
     1381 ttcgccattt aaaaaccacc agcgacgccc tttgccgccg gtagtcgaga cgggcagcgt
     1441 gacgttttcc tggcctggca attgcctgat caccgcgcca tccctcactc ctgacagcat
     1501 taacggcgcg gcat
//
LOCUS       DAGWFR010000373         1507 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.380, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000373 DAGWFR010000000
VERSION     DAGWFR010000373.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1507)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1507)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1507
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.380"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..>1507)
                     /locus_tag="MOX77_004770"
     CDS             complement(<1..>1507)
                     /locus_tag="MOX77_004770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001237670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Ig-like domain repeat protein"
                     /protein_id="HCA3360131.1"
                     /translation="WSFTPSTSLGAGVWNLTATATDAAGNTSAASEIRSFTIDTTAPA
                     APVIDTVYDGTGPITGNLSSGQITDEARPVISGTREANTTIRLYDNGTLLAEIPADNS
                     SSWRYTPDASLATGNHVITVIAVDAAGNASPVSDSVNFVVDTTPPLTPVITSVSDDQA
                     PGLGTIANGQNTNDPTPTFSGTAEAGATITLYENGTVIGTTTAQPDGAWSVSTSTLAS
                     GTHVITAVATDAAGNSSPNSTAFTLTVDTTAPQTPILTSVVDDVAGGVTGNLANGQIT
                     NDNRPTLNGTAEAGSVVSIYDGDTLLGVTSANASGAWSFTPTTGLNDGTRTLTVTATD
                     PAGNVSPATSGFTIVVDTLAPTVPLITSIVDDVPNNTGAIGNGQSTNDTQPTLNGTAE
                     ANSAVSIFDNGALVTTVNANASGNWSWTPTASLGQGSHAYSVSAADAAGNVSAASPST
                     TIIVDTIAPGAPGNLVINATGNRVTGTAEAGSTVTITSETGVVLGTATADGT"
BASE COUNT          254 a          419 c          493 g          341 t
ORIGIN      
        1 gtaccgtcgg cggtggcggt tcccagtacc acaccagtct cagaggtaat cgtcactgtg
       61 ctgcctgctt ccgcggtgcc cgtcacccga ttaccggtag cattgatgac taggttaccg
      121 ggcgcgccgg gcgcaatggt atccacgata atcgttgtcg atggcgaagc ggcgctaacg
      181 ttgccagccg catcggcggc gctaacgcta taggcatgac ttccctggcc gagcgaggcg
      241 gttggcgtcc agctccagtt gccgctggca ttggcgttca cggtcgtgac cagcgcgcca
      301 ttatcgaaga tacttaccgc gctgttggct tccgcggtac cgttgagcgt cggctgtgtg
      361 tcattggtcg attgtccatt gccaatggcg ccggtattgt tcgggacatc atcaacgatg
      421 ctggttataa gcggaaccgt tggcgcaagg gtatcgacca cgatagtaaa accgctggtg
      481 gccgggctaa cgttgcctgc tgggtcggtg gcggtcactg ttaatgtgcg cgtgccgtcg
      541 tttaaccctg tcgtcggcgt gaagctccat gcgccgctag cgttagccga ggtgacgcca
      601 agcagagtgt cgccatcata gatactgacc acgctgcccg cttcggcagt gccgttcagc
      661 gtggggcggt tatcattggt tatctgacca ttagcgagat ttcctgtgac cccgcccgcg
      721 acgtcatcca ccacggacgt caggattggc gtttgcggcg cggtggtatc gaccgtcagg
      781 gtgaaagccg tactgttcgg gctgctgttt cctgcggcat cggtggcgac ggcggtgatg
      841 acgtgcgttc cgcttgccaa cgttgaggtg gagacgctcc acgcgccgtc aggctgagcc
      901 gttgtcgtgc caatgaccgt accattttca tagagcgtga tcgtggcgcc ggcttctgcg
      961 gtgccgctga aggttggcgt aggatcgttg gtattttggc cgttcgcgat cgtgccgagg
     1021 cctggcgcct gatcgtcact gactgatgtg attaccggcg tcagcggcgg cgtggtatcg
     1081 acgacgaaat taacgctgtc cgaaacgggg ctggcgttgc ctgcggcatc aacggcaatg
     1141 acggtaatta catggttgcc cgtcgccagc gaggcgtcgg gcgtgtagcg ccagctactg
     1201 ctattgtcgg cgggaatttc agccagcagc gtgccgttat cgtagagacg aatagttgtg
     1261 ttggcttcac gggtgccgct aatgacaggg cgcgcctcgt ctgtgatctg ccctgaactc
     1321 agattgccgg taatggggcc cgtaccgtcg tagaccgtat caataacagg cgcggcggga
     1381 gccgtggtat caatagtaaa cgagcgtatt tcggacgcgg cgctggtatt gcctgccgca
     1441 tcggttgctg tcgccgtcag gttccagacg cccgcgccca gcgaggtaga cggtgtaaag
     1501 ctccagc
//
LOCUS       DAGWFR010000374         1463 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.381, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000374 DAGWFR010000000
VERSION     DAGWFR010000374.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1463)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1463)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1463
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.381"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            123..1445
                     /locus_tag="MOX77_004771"
                     /pseudo
     CDS             123..1445
                     /locus_tag="MOX77_004771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462790.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
BASE COUNT          377 a          381 c          376 g          329 t
ORIGIN      
        1 atgaaatcag gacaggtggc gctctctctt tgacgctgcc gccattttgt cgccatcgtt
       61 aaaaaacagt gtttctaaca tcatgatttt aaacagctta aatttcaggc aacaaaaaac
      121 ccattaacct tgctccagcc gatctaccga aagagggcgg aaggtatgac ctgcctattg
      181 ctgttgcgct tctggccgcg tctgagcagc ttacagcgtc gaatcttgag gcatatgagc
      241 tggtgggtga gttagcgctt acaggcgcat tacgcggcgt tcctggcgca atatcaagtg
      301 caacggaagc catcagggcc ggcagaaata ttatcgtcgc aacagagaac acggcggagg
      361 ttgggcttat cagcaaagaa ggatgtttta tcgccgatca tctacaaacc gtctgcgcct
      421 ttctggaagg gaaacacgcc ctggaaagac ctttagctca ggatatggca tcgtctaccg
      481 caactgccga tcttcgcgat gtgatcggtc aggagcaggg taaacgcggc ctggagatta
      541 cagcggcagg gggacataat ctgctattga tcggcccgcc gggtacgggt aaaaccatgc
      601 tggccagtcg actgagcggg attcttccac cattaagcaa tgaagaggcg ttggaaagcg
      661 ccgcgatcct cagtctggtt aatgccgata cggtacaaaa acgatggcag caacgtccct
      721 ttcgctcacc tcatcatagc acctcactta ctgctatggt cggcggcggc gcaatacccg
      781 ccccgggaga gatatcgctg gcgcacaacg gaattttgtt ccttgatgaa ttgcctgaat
      841 ttgaacgacg cacactggat gcgctacgtg aacctataga atccggtcaa attcatttat
      901 cccgtaccag agcgaaaata acgtaccctg ccaggttcca gttaatcgcc gcaatgaatc
      961 ccagcccgac cggacattat cagggaaacc ataatcgctg cacgccagaa cagacactac
     1021 gttaccttaa tcggttgtca ggcccgtttc ttgatcgttt tgacctttcg cttgagatac
     1081 cgcttcctcc gcccgggatt cttagccaac acgcctcaaa gggtgagagc agcgctacgg
     1141 taaaaaagcg ggtcatcgcc gcccataaac ggcagtaccg acgccagaag aagttaaacg
     1201 cgcgtctgga gggtcgcgaa atccaaaaat attgtgtttt acatcacgat gacgcccgct
     1261 ggcttgaaga cacgctggtg catcttggat tatccattcg cgcctggcag cgtttactaa
     1321 aagttgccag aaccattgcc gacatagaac tggctgacca gatctcgcgt cagcatttgc
     1381 aggaggcggt aagctatcgg gcgatagaca ggttgttaat tcatttgcaa aagctgttgg
     1441 cgtaaaaaaa gggcattacg ccc
//
LOCUS       DAGWFR010000375         1456 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.382, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000375 DAGWFR010000000
VERSION     DAGWFR010000375.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1456)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1456)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1456
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.382"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..156
                     /locus_tag="MOX77_004772"
     CDS             <1..156
                     /locus_tag="MOX77_004772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyltransferase domain-containing protein"
                     /protein_id="HCA3360132.1"
                     /translation="AQTGIYPLSTPGGWQLIGLTPLKLFDPMRETPVLLRPGDSVRFV
                     PQKEGIC"
     gene            150..1082
                     /locus_tag="MOX77_004773"
     CDS             150..1082
                     /locus_tag="MOX77_004773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin-dependent carboxyltransferase family
                     protein"
                     /protein_id="HCA3360133.1"
                     /translation="MLNIIRAGIYTSVQDSGRHGFRQSGLSHCGALDKPAFQTANLLV
                     GNDANAPALEITLGQLVVEFENETWFALTGAGCEAQLDDQPVWTGWRLPVKAGQRLTL
                     HRPLHGMRSYLAVAGGIAVPEVMGSCSTDLKSGIGGLEGRLLKDGDRLATGKPSRQLS
                     GPQGVKQLLWGNRIRALPGPEYREFDRASQEAFWRSPWQLSPQSNRMGYRLQGQSLTR
                     TTDRELLSHGLLPGVVQVPYNGQPIVLMNDAQTTGGYPRIACIIEADMYHLAQIPLEQ
                     PIHFVQCSLEEALNARRERRRYLEQLTWRLQHEH"
     gene            1072..>1456
                     /locus_tag="MOX77_004774"
     CDS             1072..>1456
                     /locus_tag="MOX77_004774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LamB/YcsF family protein"
                     /protein_id="HCA3360134.1"
                     /translation="MNIDLNADLGEGCASDSELLTLVSSANIACGFHAGDAQTMLTCV
                     REALKNGVAIGAHPSFPDRDNFGRTAMVLPPETVYAQTLYQIGALGAIVQAQGGVMRH
                     VKPHGMLYNQAAKDPHLAQAIAKAVH"
BASE COUNT          291 a          391 c          469 g          305 t
ORIGIN      
        1 gcgcagacgg ggatttatcc attatccacg ccgggcggct ggcagctgat cggcctcacg
       61 ccgttgaagt tattcgatcc gatgcgggag accccggttc tgctacgccc tggcgatagc
      121 gtacgctttg tgccgcaaaa ggagggaata tgctgaatat tattcgcgcg gggatttaca
      181 cctccgtgca ggatagcggg cgtcacggct ttcgtcagtc ggggctgagt cactgcggtg
      241 cgctggataa acccgccttt cagaccgcta atctcctggt cgggaacgat gcgaatgccc
      301 cggcgctgga aatcactctc ggtcaactgg ttgtcgaatt tgaaaatgag acctggttcg
      361 ctcttaccgg cgcaggctgc gaggcgcagt tggatgatca accggtctgg accggctggc
      421 gattgccggt aaaagcgggt cagcgtctta cgctgcatcg accgcttcac gggatgcgta
      481 gctatctggc ggtggcgggc ggtattgctg tgccggaggt gatgggatcg tgtagtaccg
      541 atctgaagtc cggcatcggt gggctggaag gacggctgct aaaagatggc gatcggctgg
      601 cgacgggtaa accatcgcga cagcttagcg ggccgcaggg cgtgaagcag ttactgtggg
      661 ggaatcgcat ccgtgcgcta ccggggccgg aataccgtga gttcgatcgc gcctcgcaag
      721 aagcgttctg gcgttcgccg tggcagctca gtccgcaaag taatcgcatg ggctatcgtt
      781 tgcagggaca atcgttaacg cggacaacgg atcgcgaact gctgtcgcac ggtttgctgc
      841 ccggtgtcgt gcaggtgcct tacaacggcc aacctattgt gttaatgaat gatgcccaga
      901 caactggcgg ctatccgcgc attgcctgca tcatcgaggc agatatgtac catctggcgc
      961 agatcccgct agaacaaccg atccattttg tgcaatgttc gctggaggag gcgctcaacg
     1021 cgcgccgcga gcgtcggcgc tatctggaac agcttacctg gcgacttcag catgaacatt
     1081 gatttaaatg cggatttggg cgaaggttgc gccagcgaca gcgaattatt aacgctggtc
     1141 tcctccgcta atatcgcctg tggttttcac gccggtgatg cgcaaaccat gctgacctgc
     1201 gtgcgcgagg cgctgaaaaa cggcgtggcg atcggcgcgc atcccagctt tccggatcgg
     1261 gataattttg ggcggacggc gatggttttg ccgccggaaa cggtatacgc ccagacgctg
     1321 taccaaatcg gcgcgctggg ggcgattgtc caggcgcaag gcggcgtgat gcgccatgtc
     1381 aaaccgcacg gtatgctcta taaccaggcg gcgaaagatc cccatctggc acaggcgatt
     1441 gcgaaagcgg tacacg
//
LOCUS       DAGWFR010000376         1434 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.383, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000376 DAGWFR010000000
VERSION     DAGWFR010000376.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1434)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1434)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1434
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.383"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..957)
                     /gene="ltaE"
                     /locus_tag="MOX77_004775"
     CDS             complement(<1..957)
                     /gene="ltaE"
                     /locus_tag="MOX77_004775"
                     /EC_number="4.1.2.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low-specificity L-threonine aldolase"
                     /protein_id="HCA3360135.1"
                     /translation="MIDLRSDTVTRPGRAMLEAMMTAPVGDDVYGDAPTVNALQRYAA
                     DLSGKEAALFLPTGTQANLVALLSHCERGEEYIVGQGAHNYLYEAGGAAVLGSIQPQP
                     IDAAADGTLPLENVAAKIKADDIHFARTRLLSLENTHNGKVLPRAYLKDAWTFTRERG
                     LALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTPVGSLLVGNRDYIKRAT
                     RWRKMVGGGMRQAGILAAAGLYALKHNVARLQEDHDNAAWLAQQLREAGADVMRHETN
                     MLFVRVGEAQAAALGGYLRERNILINAAPIVRLVTHLDVSREQ"
     gene            complement(996..>1434)
                     /locus_tag="MOX77_004776"
     CDS             complement(996..>1434)
                     /locus_tag="MOX77_004776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459912.1"
                     /note="catalyzes the formation of acetate from pyruvate;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ubiquinone-dependent pyruvate dehydrogenase"
                     /protein_id="HCA3360136.1"
                     /translation="IAMCGDGGFSMLMGDFLSVVQMKLPIKIVVFNNSVLGFVAMEMK
                     AGGYLTDGTELHDTNFARIAEACGITGIRVEKAADVDGALQRAFSIDGPVLVDVVVAK
                     EELAIPPQIKLEQAKGFSLYMLRAIISGRGDEVIELAKTNWLR"
BASE COUNT          298 a          443 c          387 g          306 t
ORIGIN      
        1 ctgttcgcga gagacatcca gatgcgtcac cagacgcaca atcggcgcgg cgttaatcag
       61 gatattccgt tcccgcaaat agccgccaag cgcggcggcc tgtgcttcgc caacgcgaac
      121 aaacagcata ttcgtttcgt ggcgcatgac atccgcgccc gcttcgcgaa gctgctgcgc
      181 cagccaggcg gcgttgtcat gatcctcttg cagacgcgcc acgttatgct tcagcgcata
      241 cagtccggcc gctgccagaa tcccggcctg acgcattccg ccgccgacca ttttacgcca
      301 gcgcgtcgcg cgtttaatgt aatcgcggtt gccgaccagc agcgaaccga ccggcgtccc
      361 gagacctttt gacaggcaga tggtaaaaga gtcgcaatac tgcgtaatct cttttaactc
      421 acagccgtag gcaaccaccg cgttaaaaat tcgggcgccg tcaacgtgca gcgccagccc
      481 acgttcgcgg gtaaacgtcc aggcgtcttt cagatacgcg cgcggcagca ctttcccgtt
      541 atgcgtattt tccagactga gcaagcgcgt gcgcgcgaag tggatgtcat ccgctttaat
      601 cttcgccgct acgttctcca gcggcagcgt accgtccgcg gcggcatcaa taggctgcgg
      661 ctgaatgctg ccgagcaccg cagcgccgcc agcttcatag agataattat gtgcgccctg
      721 accgacgata tactcttcgc cgcgttcaca atggctaagc agcgcgacca gattggcctg
      781 ggtgccggtg ggtaaaaaaa gcgccgcttc tttaccggaa aggtcggcgg cgtagcgctg
      841 aagggcgtta acggtagggg catcgccgta tacgtcgtcc ccgaccgggg cggtcatcat
      901 cgcctcgagc atggcgcggc ccggtcgggt aacggtatca ctgcgtaaat caatcatggc
      961 acatccctgg attttaaaag gtgatgtgca ctgttttacc ttagccagtt tgttttcgcc
     1021 agttcgatca cttcatcgcc gcggccgcta ataatggcgc gcagcatgta caggctaaag
     1081 cctttcgctt gttccagttt gatctgcggc gggatcgcca gctcttcttt tgccacgacc
     1141 acgtcaacca gtaccgggcc atcgatggaa aacgcgcgct gtagcgctcc gtccacgtct
     1201 gcggcttttt ccacgcgaat accggtaatg ccgcaggctt cggcgatacg cgcgaaattg
     1261 gtgtcgtgca gttcggtacc gtcggtaagg taaccgccag ctttcatttc catcgccaca
     1321 aagcccagca cgctgttatt aaagacgacg atttttatcg gcagcttcat ctgtaccacc
     1381 gagagaaaat cgcccatcag catactgaag ccgccatcac cgcacatcgc gata
//
LOCUS       DAGWFR010000377         1434 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.384, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000377 DAGWFR010000000
VERSION     DAGWFR010000377.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1434)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1434)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1434
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.384"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..484)
                     /locus_tag="MOX77_004777"
     CDS             complement(<1..484)
                     /locus_tag="MOX77_004777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid lyase"
                     /protein_id="HCA3360137.1"
                     /translation="MNTMTLTPGQLSLSQLYDVWRHPVQLRLDASAIDGINASVACVN
                     DIVAEGRTAYGINTGFGLLAQTRIADEDLQNLQRSLVLSHAAGVGDPLDDAMVRLIMV
                     LKINSLARGFSGIRLSVIEALIALVNAGVYPLIPAKGSVGASGDLAPLAHLSLTLLGE
                     G"
     gene            complement(486..>1434)
                     /gene="hutU"
                     /locus_tag="MOX77_004778"
     CDS             complement(486..>1434)
                     /gene="hutU"
                     /locus_tag="MOX77_004778"
                     /EC_number="4.2.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017441920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="urocanate hydratase"
                     /protein_id="HCA3360138.1"
                     /translation="LPELVNRGVRPDLVTDQTSAHDPLHGYLPSGWCWEEYQKNAQSD
                     PRGTMQAAKRSMAAHVRAMLAFSKMGVPTFDYGNNIRQMAKEMGVENAFDFPGFVPAY
                     IRPLFCRGIGPFRWVALSGDPQDIYKTDAKVKEIVAEDKHLHHWLDMARERIHFQGLP
                     ARICWVGLEWRQKLGLAFNEMVRCGEVSAPIVIGRDHLDSGSVASPNRETEAMRDGSD
                     AVSDWPLLNALLNTASGATWVSLHHGGGVGMGFSQHAGMVIVCDGTDEAAARIRRVLH
                     NDPATGVMRHADAGYDLAVECAVEQGLNLPMVAATQGKG"
BASE COUNT          316 a          468 c          375 g          275 t
ORIGIN      
        1 ttccttcgcc aagtagcgtc agcgacagat gcgccagagg cgctaagtcg cccgacgcgc
       61 caaccgaccc ttttgccgga atcagcggat acacgccggc attcaccaga gcgatgagcg
      121 cctctatcac gctcaaccga atcccggaaa acccgcgcgc caggctattg attttcaata
      181 ccatgatcag acgcaccatc gcgtcatcca gtgggtcgcc tacgcccgcg gcgtgagaca
      241 gcaccaacga tcgctgtaga ttttgcaagt cttcatcagc gatgcgcgtc tgcgccagca
      301 ggccgaaacc ggtgttgatg ccgtaggcgg tacgcccttc ggcaacaata tcattgacgc
      361 acgcaacact ggcgttaatg ccgtcaatgg cgctggcgtc cagccgaagc tgtaccggat
      421 gacgccagac atcgtacagt tgagagaggc ttaactgccc cggagtgagt gtcatggtgt
      481 tcatatcagc ctttcccctg cgtcgccgca accatcggta aattcagacc ttgctcaaca
      541 gcgcattcca ccgcgagatc atatccggca tcggcatgac gcatgacgcc cgtcgccgga
      601 tcgttgtgta acacgcggcg aatacgcgcg gcggcctcgt cagtgccatc acagacaatc
      661 accataccgg cgtgttgcga aaaacccatc cccaccccgc cgccatgatg gagcgatacc
      721 catgtcgccc cgctggcggt attcagcaac gcatttaaca gcggccagtc ggaaaccgcg
      781 tcggaaccgt cgcgcatcgc ttcggtttca cggttagggc tggcgacaga accggaatcc
      841 aggtgatcgc ggccaatcac aatgggcgcg gatacctcgc cgcaacgcac catttcgttg
      901 aacgccagcc ccagtttttg ccgccactcc aagcctaccc agcagatacg cgccggtagc
      961 ccctgaaaat gaatgcgctc acgcgccata tccagccagt gatgcagatg tttatcctca
     1021 gccactatct ctttgacttt ggcatcggtt ttatagatat cctgcggatc gccggacagc
     1081 gccacccagc gaaacggccc gatgccacga cagaacagcg gacgaatata ggctggcaca
     1141 aatcccggaa aatcaaaggc gttttccacc cccatctctt tcgccatctg gcgaatattg
     1201 ttgccatagt caaaggtcgg cacgcccatt ttactgaacg ccagcatcgc ccgaacatgc
     1261 gccgccatgg aacgtttcgc tgcctgcatc gtcccccggg gatcggattg cgcgtttttc
     1321 tgatactcct cccagcacca gccggagggc aaatagccat gtagcggatc gtgggcgctg
     1381 gtctgatcgg tcaccaggtc cgggcgcacg ccgcgattaa ccagttccgg cagg
//
LOCUS       DAGWFR010000378         1429 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.385, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000378 DAGWFR010000000
VERSION     DAGWFR010000378.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1429)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1429)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1429
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.385"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..>1429)
                     /gene="mukB"
                     /locus_tag="MOX77_004779"
     CDS             complement(<1..>1429)
                     /gene="mukB"
                     /locus_tag="MOX77_004779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partition protein MukB"
                     /protein_id="HCA3360139.1"
                     /translation="AEQVQPLRMRLSELEQRLREQQEAERLLAEFCKRQGKNFDIDEL
                     EALHQELEARIASLSESVSSASEQRMALRQEQEQLQSRIQHLMQRAPVWLAAQNSLNQ
                     LSEQCGEEFTSSQEVTEYLQQLLEREREAIVERDEVGARKNAVDEEIERLSQPGGAED
                     QRLNALAERFGGVLLSEIYDDVSLEDAPYFSALYGPSRHAIVVPDLSQIAEQLEGLTD
                     CPEDLYLIEGDPQSFDDSVFSVDELEKAVVVKIADRQWRYSRFPSLPIFGRAARENRI
                     ESLHAEREVLSERFATLSFDVQKTQRLHQAFSRFIGSHLSVAFEDDPEAEIRRLNGRR
                     VELERALATHESDNQQQRLQFEQAKEGVSALNRLLPRLNLLADETLADRVDEIQERLD
                     EAQEAARFVQQYGNQLAKLEPMVSVLQSDPEQFEQLKEDYAWSQQMQRDARQQAFALA
                     EVVERRAHFSYSDSAEMLSGNSDLNE"
BASE COUNT          289 a          449 c          367 g          324 t
ORIGIN      
        1 tttcgttgag atcgctgttg ccgctcagca tttccgccga gtcggaatag ctgaaatgcg
       61 cccgacgttc gacaacttca gccagagcaa aagcctgctg gcgcgcgtcg cgctgcattt
      121 gctgcgacca tgcatagtct tcttttaatt gctcaaactg ttccggatcg ctttgcagaa
      181 cggaaaccat tggctccagt ttggctaact ggttgccata ttgctgcaca aatcgcgccg
      241 cttcctgcgc ctcatccaac cgctcctgaa tttcatcgac ccgatcggcc agcgtttcat
      301 cggccaataa attcagccgc ggcagcaaac ggttaagcgc ggaaacgccc tctttggcct
      361 gctcaaactg aaggcgctgc tgctggttgt cgctttcatg cgtcgccagc gcgcgctcca
      421 gctcgacgcg acgcccgttc agtcggcgaa tttccgcttc cggatcgtcc tcaaaggcaa
      481 cggaaaggtg gctaccgata aaacggctga acgcctggtg caaacgctgg gttttctgca
      541 cgtcaaacga gagcgtggca aagcgctcgg aaagcacttc ccgttccgca tggagactct
      601 caatacggtt ctcgcgcgcc gcgcggccaa aaataggtag cgacgggaaa cgcgaataac
      661 gccactgacg gtcggcaatt ttcacgacca ccgccttttc cagctcgtca acgctgaata
      721 cgctgtcatc aaaagactgc ggatcgcctt cgatcaggta cagatcttcc gggcagtcgg
      781 tcagaccttc aagctgttcg gctatttgcg ataaatccgg tacgacgatc gcatggcgcg
      841 acgggccata cagtgcggag aagtacggcg catcttcaag actgacatcg tcgtagattt
      901 ccgacagcag taccccgcca aaacgctccg ccagcgcatt caaacgctga tcttccgcac
      961 cgcccggctg gcttaaacgt tcgatctctt catcaaccgc atttttacgt gcgcccactt
     1021 cgtcgcgttc gacaatggct tcgcgctcac gctccagtag ctgttgcagg tattcggtca
     1081 cttcctggct ggacgtaaac tcctcgccgc actgttcgct aagctggttc aggctattct
     1141 gcgccgccag ccagacagga gcgcgttgca tcagatgctg gatacgggat tgcagctgtt
     1201 cctgttcctg acgcaaggcc atacgctgtt cgctggctga cgacacgctc tcagacaagg
     1261 acgcgatgcg ggcttccagc tcctgatgca gcgcttccag ttcgtcaata tcaaaatttt
     1321 tgccctgtcg cttacagaac tccgccagca gacgttccgc ctcttgctgc tcgcgcagcc
     1381 gctgttccag ttcgctcagg cgcatccgca gcggctgtac ctgttccgc
//
LOCUS       DAGWFR010000379         1388 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.386, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000379 DAGWFR010000000
VERSION     DAGWFR010000379.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1388)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1388)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1388
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.386"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..212
                     /locus_tag="MOX77_004780"
     CDS             <1..212
                     /locus_tag="MOX77_004780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001519637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="primosomal replication protein"
                     /protein_id="HCA3360140.1"
                     /translation="RWQRRRIQHQEFECRLLAMTQERKIRLAQATGLVEQQTLQKEVE
                     IYEGRLARCRHALEKIENVLARLPR"
     gene            226..393
                     /gene="rsmS"
                     /locus_tag="MOX77_004781"
     CDS             226..393
                     /gene="rsmS"
                     /locus_tag="MOX77_004781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pleiotropic regulatory protein RsmS"
                     /protein_id="HCA3360141.1"
                     /translation="MSLENAPDEVKLAVDLIVLLEENRLPARTVLRALEIVMRDYENK
                     LKSTEDDSQTE"
     gene            463..1386
                     /locus_tag="MOX77_004782"
     CDS             463..1386
                     /locus_tag="MOX77_004782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rpn family recombination-promoting
                     nuclease/putative transposase"
                     /protein_id="HCA3360142.1"
                     /translation="MERLPTTPHDAVFRQMLMQKEVARDFLAIHLPEDFLAICDLDSL
                     KLESGSFVEDNLRSRYSDILYSLHTQHGPGYVYALIEHQSKSDRLMAFRLMRYAIAAM
                     QRHLDAGHDTLPLVVPILFYHGPESPWPYSLNWHNMFVKPDMAKALYSHEFALVDLTI
                     MPDNQLLQHRRIAMLELLQKHIRQRDLSELLDPLITLLTQDHLTDAQLSVLINYMLKA
                     GNAAEPGALIRQLAQGAPQYKEQLMTIAEWLEEKGRTEGLRKGLEQGLAQGREAEARA
                     IARKMLANGLEPGLIASVTGITPEELSTLSH"
BASE COUNT          360 a          351 c          380 g          297 t
ORIGIN      
        1 gccgttggca gcgcagacga atacagcatc aggagtttga atgtcgactg ctggcgatga
       61 cacaggagcg caaaattcgt ctggcgcagg cgaccggcct tgtcgaacaa caaacgctgc
      121 aaaaggaagt cgagatctat gaaggacggc tggcgcgctg ccgacatgcg ctggagaaaa
      181 tagaaaacgt actggcgcgt ttaccccgtt aacccaggag aaagtatgtc gcttgaaaat
      241 gcccctgatg aagtcaaact ggccgtggat ttaattgtgc tgcttgaaga gaatcgctta
      301 ccggcacgaa cggtgctacg cgcgctggaa atagttatgc gtgattatga aaacaagtta
      361 aaaagtacgg aagacgactc gcaaacagag taatagcccc ctggtttgtc ctcgttgtcg
      421 ctgacaaagt ggtcgctaca gtcaggcaac aaaggacggg gcatggaacg tctacccacc
      481 acgccgcacg atgcggtatt ccgacagatg ctgatgcaaa aagaggtcgc ccgcgacttt
      541 ctggctatcc acttgccaga agactttctt gcaatctgcg atctggattc actgaagctg
      601 gagtcgggga gttttgttga agacaattta cgcagccgct attcagatat tctctactct
      661 ctgcataccc aacacggccc cgggtatgtt tacgcgctta ttgaacatca gagcaaatca
      721 gaccggctga tggcttttcg cctgatgcgg tacgccattg ccgccatgca gcgtcatctg
      781 gatgccggcc atgatacctt gccgctggtg gtaccaatcc tcttttatca cggtccggaa
      841 agcccgtggc cctatagcct taactggcat aatatgtttg tgaaaccgga tatggcgaaa
      901 gccttataca gtcatgaatt tgcgctggtc gacctaacga taatgccgga taatcagctt
      961 ttgcagcatc ggcggatagc gatgttagag ctcctgcaaa aacatattcg tcaacgcgat
     1021 ttaagcgaac tgctcgaccc ccttatcacg cttttaacgc aggatcattt gacggacgcg
     1081 cagctcagtg tgctgatcaa ctatatgttg aaagcaggaa acgccgcaga acccggggcg
     1141 ctaattcgtc aactggcgca gggcgcgccg cagtataagg aacaactgat gacaatagcg
     1201 gaatggctgg aagaaaaagg ccgaacggaa gggttgcgaa aagggcttga gcaagggttg
     1261 gcacaaggcc gtgaggccga agcgcgcgct attgcccgca aaatgcttgc caacgggctg
     1321 gaacccgggc tcatcgccag cgtcaccggc attacgccgg aagagctttc tacgctttcg
     1381 cattagcg
//
LOCUS       DAGWFR010000380         1369 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.387, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000380 DAGWFR010000000
VERSION     DAGWFR010000380.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1369)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1369)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1369
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.387"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..175
                     /locus_tag="MOX77_004783"
     CDS             <1..175
                     /locus_tag="MOX77_004783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HCA3360143.1"
                     /translation="EFAEALLALLASVRQGMTAGEVAAHFGWPLEQARNVLEQLFSDG
                     ALRKRSSRYRIKN"
     gene            223..1275
                     /gene="eutR"
                     /locus_tag="MOX77_004784"
     CDS             223..1275
                     /gene="eutR"
                     /locus_tag="MOX77_004784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator EutR"
                     /protein_id="HCA3360144.1"
                     /translation="MKKTRTANLHHLYHEALPEDVKLTPRVEVDNVHQRRTTDVYEHA
                     LTITAWQQIYDQLHLGKFHGEFTEILLDEIQVFREYTGLALRQSCLVWPNSFWFGIPA
                     TRGEQGFIGAQGLGSAEIATRPGGTEFELSTPDDYTILGVVISEDVISRQATFLHNPE
                     RVLHMLRNQLALEVKEQHKAALWGFVQQALATFSESPETLHQPAVRKVLSDNLLLAMG
                     TMLEEAKPIHSAESISHQGYRRLLSRAREYVLENMSEPLTVLDLCNQLHVSRRTLQNA
                     FHAILGIGPNAWLKRIRLNAVRRELISPWSQSTTVRDAAMQWGFWHLGQFATDYQQLF
                     AEKPSLTLHQRMRQWA"
BASE COUNT          297 a          339 c          424 g          309 t
ORIGIN      
        1 tgagttcgct gaagcgttac tggcgctgct ggcatcagta cgccagggaa tgacggcggg
       61 agaggtggcc gcgcattttg gctggccgct ggagcaggcc agaaacgtgc tggaacaact
      121 cttttctgac ggagcgttgc gtaaacgcag tagtcgctat cgcatcaaaa attaatctgt
      181 cggagggccg ggcgtcctgg cgggcgtccg gcatagaaga tcatgaaaaa gacccgtaca
      241 gcgaatttgc accatcttta tcatgaagcg ttacccgaag acgttaaact tacgcccaga
      301 gtcgaggtgg acaatgttca tcagcgacgg acgacggatg tctatgaaca tgctctgact
      361 atcaccgcct ggcagcagat ctacgatcag ttacacctgg gtaaatttca tggcgagttc
      421 acggaaatcc tgcttgatga gattcaggtg ttccgtgaat acaccggcct ggcgctgcgt
      481 cagtcgtgtc tggtttggcc aaactctttc tggtttggta ttccggcgac gcgcggcgaa
      541 cagggattta ttggcgcgca ggggctcggc agcgccgaga ttgccacccg accgggaggc
      601 accgagtttg aactgagcac gccggatgat tacaccattc tgggcgtcgt tatctcggaa
      661 gatgttattt cccgtcaggc cacgtttttg cataacccgg aaagggtgct gcatatgctg
      721 cgtaaccagt tagcgctgga ggtaaaagaa cagcataaag cggcgctgtg gggctttgtg
      781 cagcaggcgc tggccacctt tagcgagagt cctgaaaccc tgcatcaacc tgcggtgcgt
      841 aaggtcttga gtgataattt gttgctggcg atgggcacga tgctggaaga ggcgaagccg
      901 attcatagcg ccgaaagcat cagccatcag ggatatcgta ggctactgtc gcgggcgcgg
      961 gaatatgtgc tggaaaatat gtcggagccg ctgacggtgc tcgacttatg taaccagcta
     1021 cacgtaagcc gtcgcacgct gcaaaatgcg tttcacgcca ttttgggcat tggccccaat
     1081 gcgtggctga aacgtattcg cctcaatgca gtgcgccggg agttgattag cccgtggtcg
     1141 cagagcacca cggtcagaga tgccgcgatg cagtggggat tctggcatct ggggcagttt
     1201 gccaccgatt atcagcaatt atttgccgaa aaaccgtcgt tgacgctgca tcaacggatg
     1261 cggcaatggg cttgatattg atgggtaggc tctccggttg ctgataacgt gcgcgtgtcg
     1321 ggaattgccc ggtggcggct ggcgccttac cgggcctacg gattcgctg
//
LOCUS       DAGWFR010000381         1364 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.388, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000381 DAGWFR010000000
VERSION     DAGWFR010000381.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1364)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1364)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1364
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.388"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..1005
                     /gene="thiP"
                     /locus_tag="MOX77_004785"
     CDS             <1..1005
                     /gene="thiP"
                     /locus_tag="MOX77_004785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine/thiamine pyrophosphate ABC transporter
                     permease"
                     /protein_id="HCA3360145.1"
                     /translation="IFMLCFASFATVLSLGGGPQATTIELAIFQALSYDYDPARAAML
                     ALIQMVCCLALVLLSQRLSKAIAPGMTLTQGWRDPDDRLHSRLTDALLIVLALLLLLP
                     PLVAVVVDGVNRSLPEVLAQPILWQAVWTSLRIALAAGVLCVVLTMMLLWSSRELHQR
                     QQLFAGQTLELSGMLILAMPGIVLATGFFLLLNNSVGLPESADGIVIFTNALMAIPYA
                     LKVLENPMRDITARYGMLCQSLGIEGWSRLKVVELRALKRPLAQALAFACVLSIGDFG
                     VVALFGNDNFRTLPFYLYQQIGSYRSQDGAVTALILLLLCFTLFTLIEKLPGRHAKTD
                     "
     gene            989..>1364
                     /locus_tag="MOX77_004786"
     CDS             989..>1364
                     /locus_tag="MOX77_004786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HCA3360146.1"
                     /translation="MLKLIDITWLYHHLPMRFTLAVERGEQVAILGPSGAGKSTLLNL
                     IAGFLAPASGTLLIAGEDHTLTPPSRRPVSMLFQENNLFSHLNVQQNIGLGLNPGLTL
                     NASQREKRDAIARQMGIESLMAR"
BASE COUNT          257 a          383 c          397 g          327 t
ORIGIN      
        1 atttttatgc tctgcttcgc cagtttcgca acggtcctgt cgctcggcgg cggcccgcag
       61 gccaccacta tcgaactggc tatctttcag gcgctcagtt atgactacga tcccgcccgc
      121 gcggcgatgc tggcattaat ccagatggtc tgctgcctgg cgctggtact gctaagtcaa
      181 cggttgagca aagcgattgc gccggggatg acgctgacgc agggctggcg cgatcctgac
      241 gatcgtctcc acagccgtct gacggacgcc ttattaatcg tgctggcgct actattgctg
      301 cttccgccgc tggtcgccgt ggtggtcgat ggcgtcaacc gcagcctgcc ggaagtgctg
      361 gcgcaaccca ttctgtggca ggctgtctgg acatcgctac gcattgcgct ggcggcgggc
      421 gttctgtgtg tggtgctgac catgatgctg ctgtggagta gccgcgagct acaccaacgc
      481 cagcaactat tcgccggaca aacgctggaa ctcagcggaa tgttgatcct cgcgatgccg
      541 gggatcgtgc tggcgacagg cttcttttta ctgctcaata acagcgttgg cttaccggaa
      601 tccgccgacg gcatcgtgat tttcaccaat gcgctgatgg caatccccta cgcgctaaaa
      661 gtcctggaaa acccaatgcg cgatattacc gcccgttatg gaatgctgtg ccagtcattg
      721 ggaattgaag gctggtcgcg gttaaaggtc gtggaactgc gggcgctgaa acgtccgctg
      781 gcgcaggcgc tggcgtttgc ctgcgtactt tctatcggtg attttggcgt cgtcgcgctt
      841 ttcggcaatg acaatttccg cacgctgccg ttttatctgt atcagcagat cggctcctac
      901 cgcagccagg acggcgcggt gaccgcgctg atactgttgc tgctctgttt tacgttattt
      961 accctcatag agaaactacc gggccgacat gctaaaactg attgatatca cctggcttta
     1021 ccatcatttg ccgatgcgtt ttacgctggc ggtagaacgc ggcgagcagg tggcgattct
     1081 tggccccagc ggcgcgggga aaagcacgtt gttgaattta attgccggtt ttcttgcgcc
     1141 tgccagcggt acgctactga ttgccggcga agaccatacg cttacgccgc cctcacgccg
     1201 tccggtctca atgctgtttc aggagaataa tttattcagc cacctgaatg tgcagcaaaa
     1261 tatcggtctg gggctaaacc ctgggttaac gctcaacgcc agccagcggg aaaaacggga
     1321 cgctatcgca cgtcagatgg gcattgagag tctgatggcg cgtt
//
LOCUS       DAGWFR010000382         1357 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.389, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000382 DAGWFR010000000
VERSION     DAGWFR010000382.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1357)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1357)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1357
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.389"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..916
                     /locus_tag="MOX77_004787"
     CDS             <1..916
                     /locus_tag="MOX77_004787"
                     /EC_number="2.7.7.13"
                     /EC_number="5.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461050.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="mannose-1-phosphate
                     guanylyltransferase/mannose-6-phosphate isomerase"
                     /protein_id="HCA3360147.1"
                     /translation="AFEVAQFVEKPGLETAQAYVASGDYYWNSGMFLFRAGRYLEELK
                     KFRPDILAACEQAMRGVDPDLDFIRVDEEAFLACPEESIDYAVMERTADAVVMPMDAG
                     WSDVGSWSSLWEISAHTPEGNVHHGDVISHKTENSYVYAESGLVTTVGVKDLVVVQTK
                     DAVLIADRHAVQDVKKVVEKIKADGRHEHHMHREVYRPWGKYDSIDAGERYQVKRITV
                     KPGEGLSVQMHHHRAEHWVVVAGTARVTINGEVKLLGENESIYIPLGATHCLENPGKI
                     PLDLIEVRSGSYLEEDDVVRFEDRYGRV"
     gene            1027..>1357
                     /locus_tag="MOX77_004788"
     CDS             1027..>1357
                     /locus_tag="MOX77_004788"
                     /EC_number="5.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461049.1"
                     /note="capsular polysaccharide biosynthesis protein;
                     catalyzes the formation of D-mannose 6-phosphate from
                     alpha-D-mannose 1-phosphate; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase CpsG"
                     /protein_id="HCA3360148.1"
                     /translation="MTKLTCFKAYDIRGRLGEELNEDIAWRIGRAYGEYLKPKTIVLG
                     GDVRLTSEVLKMALAKGLQDAGVDVLDIGMSGTEEIYFATFHLGVDGGIEVTASHNPM
                     DYNGMKLV"
BASE COUNT          307 a          358 c          440 g          252 t
ORIGIN      
        1 ggcttttgag gtggcgcagt tcgttgagaa gccggggctg gaaaccgccc aggcctacgt
       61 cgccagcggc gattactact ggaacagcgg catgtttcta ttccgcgccg gacgctatct
      121 ggaagagctg aaaaagttcc gccccgatat tctggccgcc tgtgaacagg cgatgcgcgg
      181 cgtcgatccg gatcttgact tcattcgcgt ggatgaagag gccttcctcg cctgtccgga
      241 agagtccatt gactacgcgg tgatggagcg gacggcggac gcggtggtga tgccaatgga
      301 cgcgggctgg agcgatgtcg gctcgtggtc ctcactgtgg gaaatcagcg cccacacccc
      361 ggagggaaac gtccaccacg gcgacgtcat cagtcataaa acggaaaaca gctacgttta
      421 cgccgaatcc ggcctggtga ccaccgtcgg cgtgaaggat ctggtggtgg tgcagaccaa
      481 agacgccgtg ctgattgccg atcgccacgc ggtgcaggac gtgaaaaagg tggtggagaa
      541 gatcaaggcc gacggacgcc atgagcacca catgcaccgc gaggtttacc gtccgtgggg
      601 caaatacgac tccatcgacg cgggcgagcg ctatcaggtg aagcgcatta ccgttaagcc
      661 gggggaagga ctgtcggtgc agatgcacca tcaccgtgcc gagcactggg tggtggtggc
      721 ggggaccgcc agagtcacca tcaacggcga ggttaagctg ctcggtgaaa acgagtccat
      781 ctatattccg ctgggggcga cccactgcct ggaaaatccg ggaaaaatac cgctcgattt
      841 aattgaagtg cgttccggct cgtatctcga agaggacgac gtggtgcggt tcgaggaccg
      901 ttacgggcgg gtctgacgcc tgcaattatg cccggtaagc gcaacgcgcc atccggcaat
      961 gaataacaat aacgatgttg gccatttgcg gtcagggcta actgttgcct gaagaagggt
     1021 aagcacatga caaaattaac ctgtttcaag gcctacgaca ttcgcggcag gctgggcgaa
     1081 gagctcaatg aagatatcgc gtggcggatt ggccgcgcct atggcgaata tttaaaaccg
     1141 aaaaccatcg tgctgggcgg cgacgtgcgc ctgaccagcg aggtgctgaa gatggcgctg
     1201 gcaaaagggt tacaggacgc gggcgtcgac gtgctggata tcggtatgtc cggcaccgaa
     1261 gagatttact tcgccacctt ccacctcggc gtggacggcg gtattgaagt gaccgccagc
     1321 cataacccga tggactacaa cggtatgaag ctggtgc
//
LOCUS       DAGWFR010000383         1345 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.390, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000383 DAGWFR010000000
VERSION     DAGWFR010000383.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1345)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1345)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1345
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.390"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..435)
                     /locus_tag="MOX77_004789"
     CDS             complement(<1..435)
                     /locus_tag="MOX77_004789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3360149.1"
                     /translation="MTTALSPRGKQGALLIAGILMIATTLRVTFTGAAPLLETIRTDY
                     GLSTAQTGLLTTLPLLAFALISPLAAGIARRFGMERSLFAAMLLICAGIALRSLPSAA
                     LLFAGTAIIGCGIALGNVLLPGLIKRDFSQHVARLTGAYSLTM"
     gene            536..1330
                     /locus_tag="MOX77_004790"
     CDS             536..1330
                     /locus_tag="MOX77_004790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HCA3360150.1"
                     /translation="MIGLRLDGYDPDLHHDAAVAFCIRARDDELFSPRHQHRKGQLIL
                     ALHGAITCEVENAMWMVPPQYAVWLPGSLPHSNHVTAGAELCFLFIEPAAVVMPERCC
                     TLKISPLCRELILSLARRTDSERAQMPTQRLIQVLFDELPQQPQEQLQLPVSGHPKIR
                     QMVETMAQEHARWNTLGQWASVFAMSERNLARLVVKETGLSFRRWRHQLQLILALQAL
                     IAGRNVQQTAQMLGYDSTTAFITMFKKGLGQTPGQYLTGELLLSHN"
BASE COUNT          325 a          356 c          376 g          288 t
ORIGIN      
        1 catcgtcaat gagtacgcgc ccgtcagcct ggcgacatgt tgtgaaaaat cgcgcttaat
       61 caatcctggt agcagcacat tacccagcgc tatcccgcac ccaataatgg cagttccggc
      121 aaacaacaat gcagcggagg gcagggagcg gagagcaata cccgcgcaaa tcagcagcat
      181 tgcggcaaac agactgcgtt ccatcccaaa ccggcgggca ataccggccg ccagcggcga
      241 aatcagtgca aacgccagaa gcggcaaggt tgttagcagg cccgtctggg cggtggaaag
      301 accgtaatcc gtacggattg tctccagcaa cggcgcagcg ccggtaaatg ttacgcgtag
      361 cgtagtggct atcatcaaaa taccggcaat cagtaaagcg ccctgtttgc cgcgtggtga
      421 aagggctgtc gtcatcgttt tctcatctcg tcaggcgagg cgatacctta acagttttta
      481 ctgtttggat gaatcaagct aaaatgacaa tttatcgcta aaatcggaca atataatgat
      541 tggcctgaga ctggacggtt acgatcccga ccttcaccac gatgccgctg tggccttttg
      601 tattcgcgcc agggatgatg aactgtttag ccctcgccat cagcatcgca agggacagtt
      661 gatcctcgct ctgcacggcg cgatcacctg tgaggtggaa aatgcgatgt ggatggttcc
      721 gccccagtat gccgtctggc tccccggctc gctgccgcac agtaatcatg tgaccgcagg
      781 ggcggagctg tgctttttat ttattgaacc tgcggcggtc gtcatgccgg agcgttgctg
      841 cacgctgaaa atttcgccgt tatgccggga gttgattttg tcgctggcgc gcagaaccga
      901 ttccgaaaga gcgcaaatgc caacgcagcg ccttattcag gtgttgtttg atgaactgcc
      961 gcagcagccg caggaacaat tgcaattacc agtatcgggg catccgaaaa ttcgccaaat
     1021 ggttgagaca atggcgcagg agcacgcgcg atggaatacg ttagggcagt gggccagcgt
     1081 attcgcgatg agcgagcgta accttgcccg gctggtcgtc aaagagacgg gactcagctt
     1141 tcgtcgctgg cgtcatcaat tacaattaat tctggcgcta caagcgctga tcgcgggacg
     1201 taatgtacaa cagacggcgc aaatgctggg ttatgattct accacggcat tcattacgat
     1261 gtttaaaaaa ggcctggggc agaccccagg ccagtatctg acgggcgagt tactgctttc
     1321 ccacaattaa agagaccagc cccgc
//
LOCUS       DAGWFR010000384         1330 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.391, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000384 DAGWFR010000000
VERSION     DAGWFR010000384.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1330)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1330)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1330
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.391"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..233)
                     /gene="slyB"
                     /locus_tag="MOX77_004791"
     CDS             complement(<1..233)
                     /gene="slyB"
                     /locus_tag="MOX77_004791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein SlyB"
                     /protein_id="HCA3360151.1"
                     /translation="MIKRVLAVSLMGLSLAGCVNNDSLSGDVYTASEAKQVQNVTYGT
                     IVNVRPVQIQGGDDSNVIGAIGGAVLGGFLGNT"
     gene            506..>1330
                     /locus_tag="MOX77_004792"
     CDS             506..>1330
                     /locus_tag="MOX77_004792"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HCA3360152.1"
                     /translation="MKSGRFIGVMSGTSLDGVDVVLAAIDETMVAQQASLTWPIPVHL
                     KKGILDICQGQPLTLSQLGQLDTQLGRLFAQAVNALLAQQRLQPRDIVAIGCHGQTVW
                     HEPTGEAPHTLQIGDNNHIVAHTGITVVGDFRRRDIALGGQGAPLVPAFHHALLGHPT
                     EKRMVLNIGGIANLSLLFPGQAVRGYDTGPGNMLMDAWIWRQCAQPYDKDAAWAKEGQ
                     VILPLLQKMLRDPYFAASAPKSTGREYFNYGWLERHLTAFPGADARDVQATLAELTA"
BASE COUNT          333 a          333 c          355 g          309 t
ORIGIN      
        1 atagtgttgc cgaggaatcc gcccaacacc gcgccgccga tagcgccaat cacgttagaa
       61 tcatcaccgc cctgaatttg aaccggacga acgttaacga tagtaccgta cgttacattc
      121 tgaacttgtt tagcctcgga tgcggtataa acatcacccg aaaggctatc attgttaaca
      181 cacccagcta aggataaccc catcagtgaa acggccagta cacgtttaat catttaccca
      241 tctcctgttc ttcacgaaac gctatttcag catccctata gctaaattat atggcattta
      301 tgcagttaag gtcatatctt ctgccgaaag aatgtaaaaa tcataatcag aagttaatta
      361 actaatctta aacgaagtgg gaagcaagaa aagataggtt attgatatcc gtggacggca
      421 cggcaaaaaa cgtgacgcgg gcatcgcatt gcaaaatacg ttatgccgag tgttaaggct
      481 taacccagct taataaggaa gaggtatgaa atcgggccgt tttattggcg ttatgtccgg
      541 gaccagcctt gatggtgtgg atgttgtact ggcggcaatt gatgaaacca tggttgcgca
      601 acaggcaagt ctcacctggc ccattcccgt tcatctgaaa aaaggcattc tcgatatttg
      661 ccagggacaa ccgcttacgc tctcgcaact cggccagctg gatacccagt taggccggct
      721 ttttgcacag gcggttaatg cgctgttagc gcaacaacgt ttgcagccgc gggatatcgt
      781 cgccattggt tgtcatgggc aaacggtctg gcatgagccg accggcgagg ccccgcatac
      841 gctgcaaatt ggcgataata atcacatcgt cgcccatacg gggattacag tggtcggcga
      901 ttttcggcgg cgggatattg cgctgggcgg acaaggcgcg ccgctggtgc ccgctttcca
      961 tcacgcgctg ttgggacatc cgacggaaaa acgtatggtc ctgaatatcg gcggcatcgc
     1021 caatttatct ctgcttttcc ccggacaggc ggtgcgcggg tacgacacgg ggccgggtaa
     1081 tatgttgatg gatgcgtgga tttggcgaca atgcgcgcag ccctacgaca aagacgcggc
     1141 atgggcgaaa gaaggtcagg ttattcttcc attgctgcaa aagatgttgc gcgatccgta
     1201 ctttgctgcg tcggcgccca aaagtacagg acgcgaatat ttcaactatg gctggttaga
     1261 gcgtcatctt acggctttcc ctggcgcaga cgcgcgcgat gtacaggcca cgctggcgga
     1321 gctgacggcg
//
LOCUS       DAGWFR010000385         1308 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.392, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000385 DAGWFR010000000
VERSION     DAGWFR010000385.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1308)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1308)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1308
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.392"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..>1308
                     /locus_tag="MOX77_004793"
     CDS             <1..>1308
                     /locus_tag="MOX77_004793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016505166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3360153.1"
                     /translation="TLINYWSSTYQSATTWKLIALASGSEFPGSNTSVYTSCLASDNP
                     VPAAITIEPVDPSQWYDGSGVHALKVKKGDTLQLKVTVKDASGKPVPEAPFVLTRGDG
                     YDRKGEKYTAQDGSDLQNIVTPVVIDGESLAWTTTKMGSQTGPDGTRIISVTRPDTHG
                     TRTAITATLYENVAVSASIDTIFTVVTSPDVSVARMWGHMTPSLTAADSAVYKRPLLY
                     DELASKTGAAEYPEDNERWVVFYGPNTTKTVSPEACSKGYFPSVEQLDSLYSKYPNGA
                     IKTAQGWPIIRSYWSGTNAGTITPGAPPYDYYTVDLNDDAHRKVPNISDSDRQYQICA
                     ATPQPLAGRITLTSTLATDSDIQAVKAKNSDSIPLVITTTDAAGNPVPYTPFSLIRDA
                     GTARNTSYTFTGSTNMMLAPPTGSAQQFYYNGYTIYGATGADGT"
BASE COUNT          298 a          416 c          369 g          225 t
ORIGIN      
        1 accttaatta actactggtc gtccacctac cagagcgcca ccacctggaa actgatcgcg
       61 ctggcgagcg gcagtgaatt tccgggcagc aacacctcgg tttacaccag ttgtctggcc
      121 agcgataacc cggtgccagc cgccatcacc attgaaccgg tcgatccgtc gcagtggtac
      181 gacggcagtg gcgtccatgc gctgaaagtg aaaaagggcg ataccctaca gttgaaggtg
      241 acggtgaagg acgccagcgg caaaccggtg ccggaagcgc cgtttgtgct cacccgcggc
      301 gacggctacg atcgcaaagg ggaaaagtac accgcccagg acggctccga tttgcaaaat
      361 atcgtgacgc ccgtggtgat cgacggcgaa tcgctggcct ggactaccac caaaatgggg
      421 tcgcagaccg gccctgatgg cacccgcatc atcagcgtca cccgcccgga cacccacggc
      481 acccgcacgg ccattaccgc cacgctgtat gaaaatgtcg ccgtgagcgc cagcatcgac
      541 accatcttta ccgtcgtcac cagcccggat gtcagcgtcg cccgcatgtg ggggcatatg
      601 acgccgtcgc tgacggctgc ggatagcgcg gtgtacaagc gcccgctgct ctacgatgaa
      661 ctggccagca agaccggtgc tgcggagtac ccggaagaca acgaacgctg ggtggtgttc
      721 tatgggccga atacgaccaa aaccgttagt ccggaagctt gctccaaggg gtatttcccg
      781 tccgttgagc aactggattc tctgtacagc aaatacccga acggagcgat aaaaaccgcc
      841 cagggctggc cgatcatccg ttcttactgg agcggcacaa acgccgggac aatcaccccc
      901 ggcgcgccac cctatgacta ttacacggtc gatctgaatg atgatgcgca ccggaaggtt
      961 cccaatatta gtgatagcga caggcaatac cagatttgcg ccgcgacgcc gcagcctctg
     1021 gccgggcgga ttaccctcac ttctacgctg gcgacggata gcgatatcca ggcggtgaag
     1081 gcaaaaaaca gcgactcgat tccgctggtg atcaccacca ccgatgcggc gggcaacccg
     1141 gtgccttata cgccattttc cctcatacgc gacgccggga cggcgcgcaa caccagctat
     1201 acctttaccg gcagcactaa catgatgctg gcgccgccca ccggttcggc gcaacagttc
     1261 tactataatg gctacactat ttacggtgcc accggcgcgg acggcacg
//
LOCUS       DAGWFR010000386         1275 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.393, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000386 DAGWFR010000000
VERSION     DAGWFR010000386.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1275)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1275)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1275
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.393"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..522)
                     /locus_tag="MOX77_004794"
     CDS             complement(<1..522)
                     /locus_tag="MOX77_004794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3360154.1"
                     /translation="MLAFLNQVRKPTLDLPLNVRRKMWFKSFMQSYLVVFIGYLTMYL
                     IRKNFNIAQNDMISTYRLSMTELGMIGLGFSITYGVGKTLVSYYADGKNTKQFLPFML
                     ILSAICMLGFSASMGAGSTSLFLMIAFYALSGFFQSTGGSCSYSTITKWTPRRKRGTF
                     LGFWNISHNLGGAG"
     gene            complement(665..>1275)
                     /locus_tag="MOX77_004795"
     CDS             complement(665..>1275)
                     /locus_tag="MOX77_004795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3360155.1"
                     /translation="ILAKYVLSNPYIWLLSLCYVLVYVVRAAINDWGNLYMSETLGVD
                     LVTANTAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFA
                     SYVMQAACFFTTGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGASLSGWPL
                     AKVLEIWHWTGFFAVIAIAAGISALLLLPFLNAQAPRETHEA"
BASE COUNT          335 a          356 c          352 g          232 t
ORIGIN      
        1 gcccgcgccg ccgaggttgt gggagatatt ccagaagccg agaaaggtgc cgcgtttacg
       61 acgcggagtc catttggtga tggtcgagta gctgcacgat ccgccggtac tctggaagaa
      121 accgctcagg gcatagaaag cgatcatcag aaacagactg gttgaccccg cgcccatgct
      181 ggcgctgaag ccgagcatac agatagcgga gaggatcaac ataaacggta gaaactgctt
      241 ggtattttta ccgtcagcgt agtaggaaac cagcgttttc cccacgccgt aggtgatcga
      301 gaagcccagg ccaatcatcc ccagctcggt catgctcaac ctgtaggtag agatcatgtc
      361 gttctgcgcg atgttaaagt ttttgcggat caggtacatg gtcaggtagc cgataaaaac
      421 caccagatag gactgcatga acgacttgaa ccacatttta cgccgcacat tgagcggcag
      481 atccagggtc ggcttgcgca cctggtttaa gaaggccagc atggattact cctgagctaa
      541 tttttatacc tgcgaatggc aggcattgta aaaatccaca ggaaaagggg cctgcgacag
      601 cgtccaggca aaaccgggaa aatttcttag ttttgcccca ttcagcgcaa aaaggtgagg
      661 tgtatcacgc ttcgtgggtc tcgcgtgggg cctgggcgtt cagaaatggc agcagcaata
      721 gcgcggagat ccccgccgcg atggcgatga ccgcaaaaaa accggtccag tgccagatct
      781 ccagcacttt cgctaacggc cagccggaaa gcgacgcgcc gagataggcg aacaggccga
      841 caaagccggt ggctgcgccc gccgcctctt tatgcgagca ctccgccgcc gccatgccaa
      901 tgagcatctg cgggccgaag acaaagaaac cggtggtgaa gaaacaggcc gcctgcatga
      961 cgtagctggc gaacggcatc agccacagcg aacccacaga gagcaaaatc ccggcagcga
     1021 agattaaatt catcggtccg cggttgccgt tgaagagttt gtccgagccc caacccgcca
     1081 ccagcgcgcc gataaatcca cccaactcaa acatcgatac tgccgtgttg gccgtgacca
     1141 aatccacgcc cagcgtctcg gacatataca ggttgcccca gtcgttgatc gccgcgcgca
     1201 ccacgtacac taagacataa cacaacgaaa gcagccagat atagggattc gacagcacat
     1261 atttagcgag gattt
//
LOCUS       DAGWFR010000387         1247 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.394, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000387 DAGWFR010000000
VERSION     DAGWFR010000387.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1247)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1247)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1247
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.394"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..830)
                     /locus_tag="MOX77_004796"
     CDS             complement(<1..830)
                     /locus_tag="MOX77_004796"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HCA3360156.1"
                     /translation="MISAFDIFKIGIGPSSSHTVGPMNAGKCFIDRLIDSGDLPRTTR
                     ITVDLYGSLSLTGKGHATDTAIIMGLAGNTPQDVNIDSIPAFIQEVARSSRLSVAGGA
                     HVVDFPVADSILFHAETLARHENGMRITAWHGQTPLLHKTYYSIGGGFIVEEERFGQS
                     HDVEKSVPYDFHSASELLTLCERQGLSVSGLMMQNELALRSKEQIDAGFARIWQVMAT
                     GIERGMNTEGVLPGPLNVPRRAVALRRLLVSSDNLSRDPMNVIDWINMFALAVSEENA
                     A"
     gene            complement(900..>1247)
                     /locus_tag="MOX77_004797"
     CDS             complement(900..>1247)
                     /locus_tag="MOX77_004797"
                     /EC_number="2.3.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462155.1"
                     /note="formate acetyltransferase; catalyzes the formation
                     of formate and acetyl-CoA from pyruvate; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional pyruvate/2-ketobutyrate formate
                     lyase"
                     /protein_id="HCA3360157.1"
                     /translation="VASLTSVAKLPFTYAKDGISYTFSIVPAALGKEDAVRKTNLVGL
                     LDGYFHHEAQVEGGQHLNVNVMNREMLLDAIEHPENYPNLTIRVSGYAVRFNALTREQ
                     QQDVISRTFTQAM"
BASE COUNT          285 a          367 c          322 g          273 t
ORIGIN      
        1 gccgcgttct cttcgctcac ggccagggcg aacatgttaa tccagtcgat gacgttcatc
       61 ggatcgcggg agagattatc gctggagacc agcagacgcc gtaacgctac cgcgcggcgt
      121 gggacgttca gcggccccgg cagcacgccc tcagtattca tgccacgttc aattccggtc
      181 gccatcacct gccaaatgcg ggcaaagcca gcgtcaatct gctctttgct ccgcaacgcc
      241 agttcatttt gcatcatcag gccggaaacc gagagcccct gcctttcaca cagcgtcagc
      301 agttcgctgg cggaatgaaa atcatacggc accgattttt ctacgtcgtg cgactgacca
      361 aaacgttcct cttcgacaat aaagccgccg ccaatagagt aatacgtttt gtgtaaaagc
      421 ggcgtttgcc cgtgccaggc ggtaattcgc ataccgtttt catggcgcgc cagggtttca
      481 gcgtgaaaga gaatactgtc ggcgacggga aaatccacca catgcgcgcc acccgccacc
      541 gataaacggc tgctgcgggc aacctcctgg ataaacgccg gaatgctatc aatattgaca
      601 tcctgcggcg tattgcccgc aagacccata atgatggcgg tatcggtcgc gtggcctttg
      661 cccgtcagcg atagcgatcc gtaaagatca accgtgatgc gcgtcgttcg cggcaggtcg
      721 ccgctgtcga tcagccgatc gataaaacat tttcctgcat tcattggccc tacggtatgg
      781 gagcttgaag gtccaatgcc aatcttaaaa atatcaaatg cgctaatcat atctccccct
      841 aagattaccg ttcagtgaag atccgtcgcg gggcgatcca cacgatcgcc ccgttcacgt
      901 tacatcgcct gagtaaaggt gcgcgaaata acgtcctgtt gctgctcacg agtcagcgca
      961 ttgaagcgca cggcatagcc ggaaacgcgg atcgtcaggt tcgggtagtt ttccggatgt
     1021 tcaatcgcat ccagcaacat ttcacggttc atgacattga cgttcagatg ctgcccgcct
     1081 tctacctgtg cttcatgatg gaaatagccg tccagcaggc cgacaagatt ggttttccgc
     1141 accgcatctt ctttcccgag cgccgcaggc acaatcgaga aggtgtacga aataccgtct
     1201 ttggcgtagg taaacggcag tttcgccacc gacgtcagcg aggccac
//
LOCUS       DAGWFR010000388         1246 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.395, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000388 DAGWFR010000000
VERSION     DAGWFR010000388.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1246)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1246)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1246
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.395"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..437
                     /gene="hycE"
                     /locus_tag="MOX77_004798"
     CDS             <1..437
                     /gene="hycE"
                     /locus_tag="MOX77_004798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="formate hydrogenlyase subunit HycE"
                     /protein_id="HCA3360158.1"
                     /translation="DVISRLKVRINEVYTSLNMIDFGLDNLPGGPLMVEGFTYIPHRF
                     ALGFAEAPRGDDIHWSMTGDNQKLYRWRCRAATYANWPTLRYMLRGNTVSDAPLIIGS
                     LDPCYSCTDRMTVVDVRKKKSKVVPYKELERYSIERKNSPLK"
     gene            447..989
                     /gene="hycF"
                     /locus_tag="MOX77_004799"
     CDS             447..989
                     /gene="hycF"
                     /locus_tag="MOX77_004799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase subunit HycF"
                     /protein_id="HCA3360159.1"
                     /translation="MFTFIKKVIKTGTATSSYPLEPIAVDKNFRGKPEHNPQQCIGCA
                     ACVNACPSNALTVETDLATNELAWQFNLGRCIFCGRCEEVCPTAAIKLSQEYELAVWK
                     KEDFLQQSRFALCNCRVRNRPFAVQKEIDYAIALLAHNGDSRAENHRESFETCPDCKR
                     QKCLVPSDRIELTRHMKEVS"
     gene            989..>1246
                     /gene="hycG"
                     /locus_tag="MOX77_004800"
     CDS             989..>1246
                     /gene="hycG"
                     /locus_tag="MOX77_004800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase subunit HycG"
                     /protein_id="HCA3360160.1"
                     /translation="MSNLLGPRDANGIPVPMTVDESIASMKASLLKNIKRSAYVYRVD
                     CGGCNGCEIEIFATLSPLFDAERFGIKVVPSPRHADILLFTG"
BASE COUNT          284 a          351 c          342 g          269 t
ORIGIN      
        1 gcgacgtgat ttctcgtctg aaagtccgta tcaacgaagt ctacacctcg ctgaatatga
       61 tcgatttcgg tctggataat ctaccgggcg gcccgctgat ggtggaaggc tttacctata
      121 ttccgcaccg ttttgcgctc ggcttcgctg aagcgccgcg tggtgacgat atccactgga
      181 gcatgaccgg cgacaaccag aagctttacc gctggcgctg ccgtgcggca acctacgcca
      241 actggccgac cctgcgttat atgctgcgtg gcaacaccgt ctccgacgcg ccgctgatca
      301 tcggtagcct cgatccttgc tactcctgta ccgaccggat gaccgtggtc gatgtacgta
      361 agaagaagag caaagtcgtg ccgtacaaag aacttgagcg ctacagcatt gagcgtaaaa
      421 actcgccgct gaaataagga atcgccatgt ttacctttat caaaaaagtt atcaaaaccg
      481 gcacggcgac ctcgtcttat ccgctggagc cgattgcggt tgataaaaac ttccgcggca
      541 agccggaaca taatccgcag cagtgcatcg gctgcgccgc ctgcgttaat gcctgcccgt
      601 cgaacgcgct gacggtggaa accgatcttg cgaccaatga gctggcgtgg cagttcaatc
      661 ttggccgctg catcttctgc ggtcgctgcg aagaggtgtg cccgacggcg gcgatcaaac
      721 tgtcgcaaga gtacgaactg gcagtgtgga agaaagaaga cttcctgcaa cagtcccgct
      781 tcgcgctgtg caactgccgc gtgcgcaatc gtcctttcgc ggtacagaaa gagatcgact
      841 acgccattgc gctgcttgcg cacaacggcg acagccgagc agaaaaccac cgcgaaagct
      901 ttgagacctg cccggactgt aagcgtcaga aatgcctggt gccgtccgac cgtattgaac
      961 tgactcgcca tatgaaagag gtcagctaat gagcaattta ttaggcccgc gtgacgccaa
     1021 cggcattccg gtaccgatga cggtggatga atccatcgcc agcatgaagg cgtctctact
     1081 gaaaaatatt aagcgttcgg catacgttta ccgcgtggac tgcggcggct gtaacggctg
     1141 tgaaatcgaa atctttgcga cgctttcgcc gctgtttgat gccgagcgtt tcggcatcaa
     1201 agtagtaccg tcgccgcgtc atgccgatat tctgctgttt accggc
//
LOCUS       DAGWFR010000389         1241 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.396, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000389 DAGWFR010000000
VERSION     DAGWFR010000389.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1241)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1241)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1241
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.396"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(91..525)
                     /gene="merR"
                     /locus_tag="MOX77_004801"
     CDS             complement(91..525)
                     /gene="merR"
                     /locus_tag="MOX77_004801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hg(II)-responsive transcriptional regulator"
                     /protein_id="HCA3360161.1"
                     /translation="MENNLENLTIGVFAKAAGVNVETIRFYQRKGLLREPDKPYGSIR
                     RYGEADVVRVKFVKSAQRLGFSLDEIAELLRLDDGTHCEEASSLAEHKLKDVREKMAD
                     LARMETVLSELVCACHARKGNVSCPLIASLQGEAGLARSAMP"
     gene            597..947
                     /locus_tag="MOX77_004802"
     CDS             597..947
                     /locus_tag="MOX77_004802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mercuric transport protein MerT"
                     /protein_id="HCA3360162.1"
                     /translation="MSEPQNGRGALFAGGLAAILASTCCLGPLVLVALGFSGAWIGNL
                     TVLEPYRPLFIGAALVALFFAWKRIYRPVQACKPGEVCAIPQVRATYKLIFWIVAVLV
                     LVALGFPYVVPFFY"
     gene            961..1236
                     /gene="merP"
                     /locus_tag="MOX77_004803"
     CDS             961..1236
                     /gene="merP"
                     /locus_tag="MOX77_004803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mercury resistance system periplasmic binding
                     protein MerP"
                     /protein_id="HCA3360163.1"
                     /translation="MKKLFASLALAAAVAPVWAATQTVTLAVPGMTCAACPITVKKAL
                     SKVEGVSKVDVGFEKREAVVTFDDTKASVQKLTKATADAGYPSSVKQ"
BASE COUNT          243 a          384 c          349 g          265 t
ORIGIN      
        1 cccggacgag tgggaatcca tggtagggat ttttaccgaa atggaagaac actattaggg
       61 ggcacctcag aaaacggaaa ataaagcacg ctaaggcata gctgaccttg ccaggcctgc
      121 ttcgccctgt agtgacgcga tcaacgggca ggaaacattc ccctttcgtg catggcaggc
      181 gcacacgagt tcagacagca cggtttccat gcgcgccaag tcggccatct tctcgcgcac
      241 gtccttgagc ttgtgttcgg ccaggctgct ggcctcctcg cagtgggtgc catcgtcgag
      301 ccgcaacagc tcggcaatct cgtccagact gaaccccagc cgctgtgccg atttcacgaa
      361 tttcacccga accacgtccg cctccccata gcggcggatg ctgccgtaag gcttgtccgg
      421 ttcccgcaac aggcccttgc gctgatagaa gcggattgtc tccacgttga ccccggccgc
      481 cttggcaaaa acgccaatgg tcaggttttc caaattattt tccatatcgc ttgactccgt
      541 acatgagtac ggaagtaagg ttacgctatc caatccaaat tcaaaagggc caacgtatgt
      601 ctgaaccaca aaacgggcgc ggtgcgctct tcgccggcgg gctggccgcc attcttgcat
      661 cgacctgctg cctggggccg ctagtactgg tcgccctggg cttctccggt gcttggatcg
      721 gcaacctgac ggtgctggaa ccctatcgac cgttgttcat cggcgcggcg ctagtggcgc
      781 tgttcttcgc ctggaagcgg atttaccggc ccgtgcaggc atgcaagcca ggtgaggtct
      841 gcgcgattcc gcaggtgcgc gccacctaca agctgatttt ctggatcgtg gccgtgctgg
      901 tcctggtcgc gcttggattt ccctatgtcg ttccattttt ctattaacca ggagttcatc
      961 atgaagaaac tgtttgcctc ccttgccctc gccgccgctg ttgccccggt gtgggccgct
     1021 acccagaccg tcacgctagc ggttcccggc atgacttgcg ccgcctgccc gatcacagtc
     1081 aagaaagcgc tctccaaggt cgaaggcgtg agcaaggtcg atgtgggctt cgagaagcgc
     1141 gaggccgtcg tcacttttga cgacaccaag gccagcgtac agaagctgac caaggccacc
     1201 gcagacgccg gctatccgtc cagcgtcaag cagtgagcca g
//
LOCUS       DAGWFR010000390         1220 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.397, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000390 DAGWFR010000000
VERSION     DAGWFR010000390.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1220)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1220)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1220
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.397"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..206)
                     /locus_tag="MOX77_004804"
     CDS             complement(<1..206)
                     /locus_tag="MOX77_004804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCA3360164.1"
                     /translation="MSTKFYTLLTDIGAAKLASAAALGVPLKITHMAVGDGGGVLPTP
                     DAKQTALVNEKRRAALNMLYIDPQ"
     gene            complement(203..808)
                     /locus_tag="MOX77_004805"
     CDS             complement(203..808)
                     /locus_tag="MOX77_004805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein I"
                     /protein_id="HCA3360165.1"
                     /translation="MNSLLPPGSTPLERRLAQTCSGISDLQVPLRDLWNPATCPVSFL
                     PYLAWAFSVDRWDEGWTESVKRQVVKDAFYIHQHKGTTSAVRRVVEPFGFLIHIIEWW
                     QTGEAPGTFRLDIGVQDQGITEDTYLELERLISDAKPCSRHMIGMSINLQTSGPHWVG
                     AASYLGEEITIYPYINETIISGGTAHEGGAVHVIDTMRVNP"
     gene            complement(801..>1220)
                     /locus_tag="MOX77_004806"
     CDS             complement(801..>1220)
                     /locus_tag="MOX77_004806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
                     /protein_id="HCA3360166.1"
                     /translation="APAEVVLTVLSREGDGTAEKDLLDVVEKALNSENVRPVADRLTV
                     RSAEIIPYRVEATIFLYPGPEAEPVMAAAKASLQKYIASQTRLGRDIRRSAIFAALHV
                     EGVQRVELASPLADMVLNKTQAASCTQWSVTNGGTDE"
BASE COUNT          249 a          374 c          317 g          280 t
ORIGIN      
        1 ttctgcgggt cgatataaag catattcagc gcagcccggc gtttctcatt taccagtgcc
       61 gtctgctttg cgtccggcgt tggcaatact ccgccgccat cgcccaccgc catatgggta
      121 atttttagcg gcacaccgag cgcggcggcg ctggcaagtt ttgccgcgcc aatatccgtc
      181 agcagggtat aaaattttgt gctcatggat tcactctcat tgtgtcaata acatggaccg
      241 ccccgccttc atgcgcggtg ccaccggaaa taatcgtttc gttgatatac ggatagatcg
      301 tgatttcttc gccaagatag ctggcggctc ccacccaatg cgggccgctg gtctgcagat
      361 tgatggacat gccgatcatg tggcggctac atggtttggc atcgcttatc agtcgctcaa
      421 gttccagata ggtatcttca gtgatgccct ggtcctgcac gccgatatcc aggcgaaacg
      481 tgcccggtgc ctctccggtc tgccaccact caataatgtg gatcaaaaag ccgaacggct
      541 ccaccacccg ccgcacggca ctggtggtcc ctttatgctg atgaatataa aaagcatcct
      601 tcaccacctg gcgcttgacg ctttctgtcc agccctcgtc ccagcgatcc acagagaacg
      661 cccaggcgag ataaggcagg aaactgaccg gacaggttgc cggattccac aagtcacgaa
      721 gcggcacctg cagatcagaa atcccgctgc aggtttgcgc caatcggcgc tccagtggtg
      781 ttgaacccgg tggcagcaga ctattcatcc gttcctccgt tggttacgct ccactgcgta
      841 catgatgccg cctgtgtttt gttcaggacc atatccgcca gaggagaagc cagctccaca
      901 cgctgcacac cctcaacatg cagggcggca aagatggcgc tacggcgaat atcccgacca
      961 agacgcgtct gactggcgat gtacttctgc aggctggctt ttgccgctgc cattaccggc
     1021 tctgcttccg gtcccggata gagaaaaata gtggcttcca cccggtacgg gatgatttct
     1081 gcgctgcgaa ccgtaagacg gtcagccacc gggcggacgt tctcactgtt cagagctttt
     1141 tccaccacgt ccagcaggtc tttttctgct gttccatcgc cttcgcggct caggacagtc
     1201 agcaccacct ctgcaggtgc
//
LOCUS       DAGWFR010000391         1219 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.398, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000391 DAGWFR010000000
VERSION     DAGWFR010000391.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1219)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1219)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1219
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.398"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..584
                     /locus_tag="MOX77_004807"
     CDS             <1..584
                     /locus_tag="MOX77_004807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="catalase-peroxidase"
                     /protein_id="HCA3360167.1"
                     /translation="VVGIEQAAAAAGVSISVPFAPGRVDARQDQTDIEMFSLLEPIAD
                     GFRNYRARLDVSTTESLLIDKAQQLTLTAPEMTVLVGGMRVLGTNFDGSQNGVFTDRP
                     GVLSTDFFANLLDMRYEWKPTDDANELFEGRDRLTGEVKYTATRADLVFGSNSVLRAL
                     AEVYACSDAHEKFVKDFVAAWVKVMNLDRFDLL"
     gene            complement(691..>1219)
                     /locus_tag="MOX77_004808"
     CDS             complement(691..>1219)
                     /locus_tag="MOX77_004808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HCA3360168.1"
                     /translation="GKCTQAALALAELCYNTLIEEGEKAMLAAEQHVVTPALERVIEA
                     NTYLSGVGFESGGLAAAHAIHNGLTAIPDAHHYYHGEKVAFGTLTQLVLENASVEEIE
                     TVAALCHSVGLPITLAQLDIKQDIPAKMRIVAEASCAEGETIHNMPGGATPDEVYAAL
                     LVADQYGQRFLQEWE"
BASE COUNT          238 a          341 c          361 g          279 t
ORIGIN      
        1 gcgtggtcgg tatcgagcag gcggccgctg ctgcgggtgt cagcatcagc gtaccttttg
       61 cgccgggccg ggtggatgcg cgtcaggatc agaccgacat cgagatgttc tcgctgcttg
      121 aaccgattgc cgatggattc cgtaactatc gtgcgcgtct ggatgtgtcg acgaccgaat
      181 cgctgttgat tgataaagcg cagcagttaa cgttgaccgc gccggaaatg acggtactgg
      241 ttggcgggat gcgtgtgctg ggaaccaact ttgacggcag ccagaacggt gtctttaccg
      301 acagaccggg cgtgctcagc actgacttct tcgctaatct gctggatatg cgttacgagt
      361 ggaagcccac cgacgacgct aatgagctgt tcgaaggccg ggatcgcctg actggcgagg
      421 taaaatacac ggcaacccgc gccgatctgg tgtttggttc caactccgta ctgcgcgcgc
      481 tggcggaagt ttacgcgtgt agcgatgcgc acgagaagtt tgtgaaggac ttcgtcgcgg
      541 catgggtgaa agtgatgaac ctggaccgtt tcgatctgtt gtaaatctta tgccggatga
      601 cgctaacgct tatccggcct accgtctcat atgcccaccg ggcaaaaaaa tccccgcgca
      661 attgcgggga tttttcattg caagccgacc ttattcccat tcctgcaaga agcgttgacc
      721 gtactggtcg gcgaccagca gcgcggcgta cacttcatcc ggcgttgcgc cgccaggcat
      781 gttatgaata gtttcacctt ctgcgcagga ggcttccgcg acgatgcgca ttttggccgg
      841 gatatcctgc ttaatatcca gttgcgccag cgtaatcggc aggccaacgg aatggcacag
      901 cgcagcaacg gtttcgattt cttcgaccga cgcgttttcc agcaccagtt gcgtcagcgt
      961 accgaaagcg accttctccc cgtgataata gtggtgcgca tccggaatcg ccgttaaacc
     1021 gttatgaatc gcgtgcgctg cggccagacc gccgctttca aaaccgaccc cgctcaggta
     1081 ggtgttggct tcgatgacac gttccagcgc tggcgtgacg acgtgctgtt cggcggccaa
     1141 catggctttt tcgccttctt cgatcagcgt gttatagcat agctccgcca gggccagcgc
     1201 ggcctgtgta cacttgccg
//
LOCUS       DAGWFR010000392         1211 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.399, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000392 DAGWFR010000000
VERSION     DAGWFR010000392.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1211)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1211)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1211
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.399"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..117
                     /locus_tag="MOX77_004809"
     CDS             <1..117
                     /locus_tag="MOX77_004809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
                     /protein_id="HCA3360169.1"
                     /translation="VGKNTAKIQDYIKHQLEEDKMGEQLSIPYPGSPFTGRK"
     gene            complement(407..>1211)
                     /gene="rne"
                     /locus_tag="MOX77_004810"
     CDS             complement(407..>1211)
                     /gene="rne"
                     /locus_tag="MOX77_004810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460156.1"
                     /note="bifunctional ribonuclease
                     E/endoribonuclease/RNA-binding protein/RNA degradosome
                     binding protein; forms part of the membrane-associated
                     degradosome complex along with PNPase, RhlB, and enolase;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ribonuclease E"
                     /protein_id="HCA3360170.1"
                     /translation="RHLRVSGQRRRRYRDERYPTQSPMPLTVACASPEMASGKVWIRY
                     PIVRPQETQVVEEQREADLALPQPVVAEPQVIAATVALEPQASVQAVENVAVEPQTVA
                     EPQAPEVVKVETTHPEVIAAPVDEQPQLIAESDTPEAQEVIADAEPVAETADASITVA
                     ENVADVVVVEPEEETKAEAAVVEHTAEETVIAPAQVVEKPQDVVCVDDHNHASAPMTR
                     APAPEYVPETPHHSDWQRPSFHFEGKGAAGGHSATRHASAPATRPQPVE"
BASE COUNT          234 a          340 c          357 g          280 t
ORIGIN      
        1 gtgggtaaga acacggcgaa gatacaggac tacataaagc accagcttga agaggataaa
       61 atgggtgagc aattatcgat cccttatccg ggcagcccgt ttacgggccg taagtaacga
      121 agtttgatgc aaatgtcaga tcgtatgcgc ctgttagggc gcggctggta agagagcctt
      181 acaggcgcat cagaaaaacc tccggctatg ccggaggata tttatttagt cgttattgag
      241 ttagtggtca tattgtcgcg cccgtagcga cgccatccgt acgtattatc ccgcccgatc
      301 tcataaacgc ctggagtgac taaaagacgc catggggtga ggcatcgccc tgtaagaggc
      361 ataaaaaaaa gccgacctgg cggtcggctt tgtatcagca tttacatcat tctaccggct
      421 gtgggcgtgt cgccggggcg ctggcgtgac gtgtggcgct gtgtccgcct gctgcgcctt
      481 taccttcaaa gtggaaggaa gggcgctgcc agtcgctatg gtgcggggtt tccggcacat
      541 attccggcgc tggcgcacgc gtcatcggcg cgctggcgtg gttatgatcg tcaacgcaga
      601 caacgtcctg cggcttttcc accacctggg ccggtgcgat aacggtttct tctgccgtgt
      661 gctccacaac agccgcttcc gcttttgtct cttcttctgg ctcgacaacg acaacatcag
      721 ctacgttttc agccaccgta atggacgcgt cggcggtttc tgctaccggt tcggcgtcag
      781 caataacctc ttgcgcttcc ggcgtatcgc tttcggcaat cagttgcggc tgttcatcaa
      841 ccggcgcggc aatcacttcc ggatgcgttg tctcgacctt gacgacttcc ggcgcctgtg
      901 gttcggcgac ggtctgcggc tcaacggcaa cgttttctac cgcctgtacc gacgcttgtg
      961 gttcgagcgc tacggtcgca gcgataacct gcggttcagc gacaaccggt tgtggcagcg
     1021 ccagatctgc ttcacgctgc tcttcaacaa cctgcgtttc ctgaggacgg acaatcgggt
     1081 agcggatcca gactttaccg gacgccattt ctggcgacgc gcaggcgacg gttaacggca
     1141 tcggcgattg tgtcgggtag cgctcgtcac gatagcgacg gcgacgctga ccgcttacgc
     1201 gcaggtggcg c
//
LOCUS       DAGWFR010000393         1207 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.400, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000393 DAGWFR010000000
VERSION     DAGWFR010000393.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1207)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1207)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1207
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.400"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..>1207
                     /gene="mutS"
                     /locus_tag="MOX77_004811"
     CDS             <1..>1207
                     /gene="mutS"
                     /locus_tag="MOX77_004811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HCA3360171.1"
                     /translation="AELRDLLERAIIDAPPVLVRDGGVIAPGYHEELDEWRALADGAT
                     DYLDRLEIRERERTGLDTLKVGYNAVHGYYIQISRGQSHLAPINYVRRQTLKNAERYI
                     IPELKEYEDKVLTSKGKALALEKQLYDELFDLLLPHLADLQQSANALAELDVLVNLAE
                     RAWTLNYTCPTFTDKPGIRITEGRHPVVEQVLNEPFIANPLNLSPQRRMLIITGPNMG
                     GKSTYMRQTALIALLAYIGSYVPAQNVEIGPIDRIFTRVGAADDLASGRSTFMVEMTE
                     TANILHNATENSLVLMDEIGRGTSTYDGLSLAWACAENLANKIKALTLFATHYFELTQ
                     LPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALAGVPKEVIKRARQK
                     LRELESISP"
BASE COUNT          283 a          334 c          343 g          247 t
ORIGIN      
        1 tcgccgaact gcgcgacctc ctggagcgcg ccattattga cgcgccgccg gtactggtcc
       61 gcgacggcgg cgttattgcg cccggctacc atgaagagct ggatgaatgg cgcgcgctgg
      121 cggacggcgc caccgattat ctcgatcgtc tggaaattcg cgaacgcgag cgtaccgggc
      181 tggatacgct gaaagtcggc tataacgcgg tacatggtta ttacattcag attagccgtg
      241 gtcaaagcca tctggcgccc atcaattatg tgcgtcgcca gacgctgaaa aatgccgaac
      301 gctacattat tcctgagctt aaagagtacg aagataaagt tctgacctcg aaaggcaaag
      361 cactggcgct ggaaaaacag ctatatgacg aattgtttga tctgctgttg ccgcatctgg
      421 ccgatttaca gcagagcgcc aacgctctgg cggagctgga tgtgctggtt aacctggccg
      481 aacgcgcctg gacgctgaat tacacctgcc caacatttac cgataaaccc ggtatccgta
      541 ttaccgaagg tcgccacccg gtggttgaac aggtactgaa tgagccgttt atcgctaacc
      601 cgctcaatct gtcgccgcag cgccggatgt tgatcattac cggccccaat atgggcggta
      661 aaagtaccta tatgcgacaa acggcattga tcgccctgct ggcctatatc ggcagttacg
      721 ttccggcgca aaacgtggaa atcggcccca tcgaccgtat ttttacccgc gtcggcgcag
      781 cggacgacct ggcttccggg cgttcgacct ttatggtgga gatgaccgaa accgcgaaca
      841 ttctgcataa tgcgacggaa aacagtctgg tattgatgga tgaaatcggg cgcggtacct
      901 ccacgtatga cgggctgtca ttggcctggg cctgcgcgga gaatctcgcg aataagatta
      961 aagcgttaac gctgttcgct acccactact tcgagctgac ccaattaccg gagaaaatgg
     1021 aaggcgtggc gaacgtccac ctggatgcgc tggaacacgg cgatactatc gcgtttatgc
     1081 acagcgtgca ggacggcgcg gcaagtaaga gctatggcct ggcggtcgcg gcgcttgcgg
     1141 gcgtccctaa agaagtcatc aaacgcgcgc gccaaaaact ccgcgagctg gaaagcatct
     1201 cgcccaa
//
LOCUS       DAGWFR010000394         1203 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.401, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000394 DAGWFR010000000
VERSION     DAGWFR010000394.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1203)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1203)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1203
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.401"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..609
                     /gene="fliI"
                     /locus_tag="MOX77_004812"
     CDS             <1..609
                     /gene="fliI"
                     /locus_tag="MOX77_004812"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460925.1"
                     /note="involved in type III protein export during
                     flagellum assembly; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellum-specific ATP synthase FliI"
                     /protein_id="HCA3360172.1"
                     /translation="RIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYP
                     PSVFAKLPALVERAGNGIHGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRR
                     LAEAGHYPAIDIEASISRAMTALITEQHYARVRLFKQLLSSFQRNRDLISVGAYAKGS
                     DPMLDKAITLWPQLEAFLQQGIFERADWEDSLQALDLIFPTV"
     gene            631..1074
                     /gene="fliJ"
                     /locus_tag="MOX77_004813"
     CDS             631..1074
                     /gene="fliJ"
                     /locus_tag="MOX77_004813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis chaperone FliJ"
                     /protein_id="HCA3360173.1"
                     /translation="MAQHGALETLKDLAEKEVDDAARLLGEMRRGCQQAEEQLKMLID
                     YQNEYRSNLNTDMGNGIASNRWINYQQFIQTLEKAIEQHRLQLTQWTQKVDLALKSWR
                     EKKQRLQAWQTLQDRQTAAALLAENRMDQKKMDEFAQRAAMRKPE"
     gene            1071..>1203
                     /locus_tag="MOX77_004814"
     CDS             1071..>1203
                     /locus_tag="MOX77_004814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-length control protein FliK"
                     /protein_id="HCA3360174.1"
                     /translation="MITLPQLITTDTDMTAGLTSGKTTGSAEDFLALLAGALGADGAQ
                     "
BASE COUNT          301 a          333 c          340 g          229 t
ORIGIN      
        1 cgcatcgccg aagactttcg cgatcgcgga cagcatgtgt tgctgattat ggattcgctg
       61 acgcgctatg cgatggcgca gcgtgaaatt gccctggcaa tcggcgaacc gccagccacc
      121 aaaggttatc cgccctcggt gttcgcaaag ctgccagcgc tggtcgagcg tgccggtaat
      181 ggcatccacg gcggcggctc tatcaccgcg ttttataccg tattgaccga gggggacgac
      241 caacaagatc ccattgccga ctcggcacgc gcaatcctcg acgggcacat tgtcttgtcc
      301 cgccgcctgg cggaagccgg gcactacccg gccattgata tcgaggcgtc aatcagccgg
      361 gcgatgaccg cgctcattac cgagcagcac tatgcgcggg tacggctatt taaacaattg
      421 ctttccagtt tccagcgtaa ccgcgatctg atcagcgtcg gcgcctatgc caaaggcagc
      481 gatccgatgc tcgataaagc cattacctta tggccgcaat tagaagcgtt tttacagcaa
      541 ggcatttttg aacgggccga ctgggaggac tctcttcagg cgctcgattt aattttcccg
      601 acggtgtgat aaatcaggag ggcgacgatc atggcacaac atggcgctct ggaaacactc
      661 aaagatctgg ccgaaaaaga ggtagatgac gcggcgcgtt tactgggcga aatgcgtcgc
      721 ggctgccaac aggcggaaga acagctcaaa atgctgatcg attatcagaa tgagtatcgc
      781 agtaatttga acaccgatat gggcaacggc atcgccagta atcgctggat caactatcag
      841 cagtttattc agacactgga aaaggcgata gagcagcatc gcctccagct tacgcagtgg
      901 acgcaaaaag tcgacctggc gctgaagagc tggcgtgaga aaaagcagcg acttcaggcc
      961 tggcaaacct tacaggaccg acaaaccgcg gcagcgctgt tagctgaaaa ccgcatggat
     1021 cagaaaaaga tggatgaatt tgctcagcgt gcagcaatga ggaaacccga atgatcaccc
     1081 tgccccaact gatcaccacc gataccgaca tgaccgcggg tctgacgtca ggaaaaacca
     1141 ccggttcagc cgaggacttt ctggcgctcc tggcgggcgc gttaggcgca gacggcgcac
     1201 agg
//
LOCUS       DAGWFR010000395         1194 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.402, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000395 DAGWFR010000000
VERSION     DAGWFR010000395.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1194)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1194)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1194
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.402"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..547
                     /locus_tag="MOX77_004815"
     CDS             <1..547
                     /locus_tag="MOX77_004815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HCA3360175.1"
                     /translation="GMSAPWLLVAIRPGLALRLPRPGRWMNVLRRILGLMMLGSAIWL
                     ATLLLPHFGFTASKSAQDTVQWQPLSEQAIQSALAQHKRVFVDVTADWCITCKVNKYN
                     VLQKEDVQAALQQPDVVALRGDWTLPSDAITDFLKTRGQVAVPFNQVYGPGLPEGEAL
                     PTLLTRDAVLQTLKKAKGITQ"
     gene            544..1167
                     /locus_tag="MOX77_004816"
     CDS             544..1167
                     /locus_tag="MOX77_004816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HCA3360176.1"
                     /translation="MKYMIVLLLALFSTLSIAQETAPFTPDQEKQIKNLIHAALFNDP
                     ASPRIGAKHPKLTLVNFTDYNCPYCKQLDPMLEKIVQKYPDVAVIIKPLPFKGESSIL
                     AARIALTTWRDHPQQFLALHEKLMQKRGYHTDDSIKQAQQKAGATPVTLDEKSMETIR
                     TNLQLARLVDVQGTPATIIGDELIPGAVPWDTLEAVVKEKLAAANGG"
BASE COUNT          293 a          301 c          353 g          247 t
ORIGIN      
        1 gggaatgagc gcgccgtggc tactggtcgc gatacgacca gggcttgcgc tacgtttacc
       61 gcgccccggg cgttggatga atgtcctgcg caggatcctc ggtctgatga tgctggggtc
      121 ggctatctgg ctggcgacgt tactcctgcc gcatttcggc ttcactgcgt caaagagcgc
      181 gcaagacacg gttcagtggc aaccgttgag tgaacaggca atccagtcgg cgctggcgca
      241 gcataagcgg gtatttgtcg atgtcactgc ggactggtgt attacctgta aagtgaataa
      301 atacaacgtc ctgcaaaaag aggatgtgca ggccgccttg caacagccgg atgttgtggc
      361 gctgcgggga gactggacgc tgccgtccga tgccattaca gattttctga aaacgcgcgg
      421 ccaggtcgcc gtgccgttta atcaggtata tggccccggt ttgccggaag gggaggcact
      481 gcccactttg ctgacccgcg atgcggtatt acaaacgttg aaaaaagcga aaggaataac
      541 ccaatgaaat acatgattgt tttactgctg gcgctgtttt cgacgctgag catcgcgcaa
      601 gaaaccgctc cttttacgcc ggatcaggaa aagcagatta aaaatctgat ccatgcggcg
      661 ttgtttaacg atcctgccag cccgcggata ggcgctaaac accctaagct gacgctggtg
      721 aactttacgg attacaactg cccgtactgc aaacagctcg atccgatgct ggaaaagatt
      781 gtgcagaaat atcctgacgt tgcggtcatt attaaaccgc tgccattcaa aggagagagt
      841 tccatactgg cggcgcgtat tgcgctgacc acctggcgcg atcatccgca acagttcctc
      901 gcgctacatg aaaaacttat gcaaaagcgc ggttaccata cggatgacag tattaaacag
      961 gcccagcaga aagcaggggc gacgccagtg acgctggatg aaaaaagcat ggaaacgata
     1021 cgcactaatt tgcagttggc aagactggtc gacgtgcaag gaacgccagc gacgatcatt
     1081 ggcgacgagc tgattccggg cgcagtgccc tgggatacgc tggaagcggt ggtgaaagaa
     1141 aaactggcgg ctgccaatgg cgggtaaact gcggcgttgg ctgcgtgaag ccgc
//
LOCUS       DAGWFR010000396         1189 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.403, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000396 DAGWFR010000000
VERSION     DAGWFR010000396.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1189)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1189)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1189
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.403"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..486)
                     /locus_tag="MOX77_004817"
     CDS             complement(<1..486)
                     /locus_tag="MOX77_004817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460639.1"
                     /note="catalyzes the epimerization of L-alanyl-D-glutamate
                     to L-alanyl-L-glutamate; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-Ala-D/L-Glu epimerase"
                     /protein_id="HCA3360177.1"
                     /translation="MRSVKVYEETWPLHTPFVIARGSRSEAHVVVVELEEEGVKGIGE
                     CTPYPRYGESDASVMAQIMSIVPQLENGLTREALQKLLPAGAARNAVDSALWDLQARQ
                     RQQSLAGLLGVTPSPVFTTAQTVVIGTPEQMAASAAALWKKGATLLKIKLDARLISER
                     MV"
     gene            602..1108
                     /gene="tpx"
                     /locus_tag="MOX77_004818"
     CDS             602..1108
                     /gene="tpx"
                     /locus_tag="MOX77_004818"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol peroxidase"
                     /protein_id="HCA3360178.1"
                     /translation="MSQTVHFQDNPVTVANVIPQAGSKAQAFTLVAKDLSDVSLSQYA
                     GKRKVLNIFPSIDTGVCAASVRKFNQLATEVENTVVLCVSADLPFAQSRFCGAEGLSN
                     VITLSTLRNNEFLKNYGVEIVDGPLKGLAARAVIVLDENDNVIFSQLVDEITHEPDYD
                     AALNVLKA"
BASE COUNT          276 a          332 c          281 g          300 t
ORIGIN      
        1 caccatacgt tcgctaatca gacgagcatc gagtttaatt ttcagcaacg tcgccccttt
       61 tttccatagt gccgccgcac tggcagccat ctgttccggc gtgcctatca ctaccgtttg
      121 cgcggtagta aaaaccgggg acggcgtcac gccgagcagc ccggcaaggc tttgctgccg
      181 ctggcgggcc tgcaaatccc ataaggcgct atccaccgcg ttgcgcgccg cgcctgccgg
      241 caacagtttc tgcaatgctt cgcgagtcag cccgttttcc aactgaggca caatactcat
      301 gatttgcgcc atgaccgagg catcactttc accataacgt ggatatggcg tacattcccc
      361 gatgcctttt acgccctctt cttccagttc gacaacgaca acatgcgctt cgcttcggct
      421 accacgcgca ataacaaaag gcgtatgtaa cggccaggtt tcctcatata ccttaacaga
      481 tctcatctct tcccctctga tagcgccgga cgcggcttgc tacaaatagt atttgccgtg
      541 ttaatgaata atgacttaaa ctggatttcg acgttaacta taagtaaata ggaacataat
      601 tatgtcacag actgtacatt tccaggataa cccggtcacc gttgccaacg ttattccgca
      661 ggctggtagc aaagcacagg cttttactct tgtcgcaaaa gatttgtctg acgtttccct
      721 cagccaatat gcaggcaaac gcaaagtgct gaatattttc ccaagcattg atactggcgt
      781 atgcgccgca tcagttcgta agtttaatca actggccaca gaagtggaga ataccgtcgt
      841 attgtgcgtt tctgctgacc tgccttttgc acagtcgcgt ttttgcggcg cggaaggcct
      901 gagcaacgtt attacgcttt ccactctgcg taataacgag tttctaaaaa actacggcgt
      961 cgaaatcgtt gacggcccgc tgaaaggttt ggcggcgcgc gcagtcatcg tgcttgacga
     1021 aaacgacaac gttattttca gccagttggt ggatgaaatc acccacgagc cggattacga
     1081 cgccgcgctt aatgtcctga aggcataagc cagcgcctgc tggcgctacg tttgtcagtg
     1141 ctacaggcgg tgctcttttg tcacaagaag gcctctatcc ggaggcctt
//
LOCUS       DAGWFR010000397         1175 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.404, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000397 DAGWFR010000000
VERSION     DAGWFR010000397.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1175)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1175)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1175
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.404"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..316
                     /locus_tag="MOX77_004819"
     CDS             <1..316
                     /locus_tag="MOX77_004819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glutathione S-transferase C-terminal
                     domain-containing protein"
                     /protein_id="HCA3360179.1"
                     /translation="RVLRYLTDELKVSEEDKKRWYAHWIQQGLSAVEQLLRKSQSGRF
                     CVGDAPGLADCCLIPQWANALRMGCDLSGYPRCKAVYDACVQLPAFIAAAPENQQDKI
                     PA"
     gene            331..>1175
                     /locus_tag="MOX77_004820"
     CDS             331..>1175
                     /locus_tag="MOX77_004820"
                     /EC_number="1.14.13.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybenzoate 6-monooxygenase"
                     /protein_id="HCA3360180.1"
                     /translation="MTHVTSAIIVGGGIGGAATALSLARQGIKVMLLEKAHEIGEIGA
                     GIQLGPNAFSALDSLGVGDVARQRAVFTDHITMMDAVNAEEVVRIETGQAFRDHFGGP
                     YAVIHRVDIHATVWEAVLTHPGVEYRTSTHIVDIRQTPDDVTVFDEQGNSWTADILVG
                     CDGVKSVVRQSLLGDAPRVTGHVVYRAVIDCDDMPDDLRINAPVLWAGPHCHLVHYPL
                     RGGQQYNLVVTFHSRQQEEWGVKDGSKEEVLSYFAGIHPRPRQMLDKPTSWRRWSTAD
                     REPVA"
BASE COUNT          254 a          298 c          379 g          244 t
ORIGIN      
        1 gcgcgtgttg cgctacctga ccgatgagct gaaggttagc gaagaggata aaaaacgctg
       61 gtacgcccac tggatacagc aagggttaag cgcggtagag cagctattgc gtaaaagtca
      121 gtccggacga ttctgcgtgg gcgacgcgcc aggccttgcg gactgctgcc tgattcctca
      181 gtgggcgaat gcgctcagga tgggctgcga tttatcaggc tatccgcgct gtaaagccgt
      241 ttatgacgcc tgcgtacagc taccggcgtt tattgccgcc gcgccggaaa atcaacaaga
      301 taaaatcccg gcctgaaaag gagaatgacc atgactcacg tgacaagcgc aattattgta
      361 ggtggcggaa tcggcggcgc ggcgaccgcg ctgtcgctgg cgcgccaggg aataaaagtc
      421 atgctgctgg aaaaagcgca cgaaattggc gagattggcg cgggtattca gcttgggccg
      481 aacgcttttt cggcgctgga tagtctcggt gtgggcgatg ttgcccgcca gcgtgcggtg
      541 tttaccgatc acattaccat gatggatgcc gtgaatgccg aagaagtggt acgcattgaa
      601 accgggcagg cgttccgcga ccattttggc gggccgtatg cggtaattca ccgggtagat
      661 attcatgcaa cggtatggga agcggtgctg acgcaccctg gcgtggagta tcgtacctcg
      721 acccatattg tcgatatccg ccagacgccg gatgacgtta cggtgtttga tgagcaggga
      781 aatagctgga cggcggatat tctcgtgggc tgcgacggcg ttaaatcggt cgtgcggcaa
      841 agtttactcg gcgacgcgcc gcgcgtaacg gggcatgtag tctatcgggc ggtgattgat
      901 tgcgacgata tgccggacga tttacgtatt aacgcaccgg tgctgtgggc aggcccgcat
      961 tgtcacctgg tccattatcc gctgcgcgga ggccaacagt acaatctggt ggtgacattc
     1021 cacagccgcc agcaagaaga gtggggcgtg aaagacggca gtaaagaaga ggtgctctct
     1081 tattttgccg gtattcatcc ccgcccgcgt cagatgctgg ataagccgac ctcctggcgc
     1141 cgctggtcga ccgccgatcg cgagccggtc gcaaa
//
LOCUS       DAGWFR010000398         1170 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.405, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000398 DAGWFR010000000
VERSION     DAGWFR010000398.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1170)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1170)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1170
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.405"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..222)
                     /locus_tag="MOX77_004821"
     CDS             complement(<1..222)
                     /locus_tag="MOX77_004821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001138064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4158 domain-containing protein"
                     /protein_id="HCA3360181.1"
                     /translation="MPRRSILSAAERESLLALPDSKDDLIRHYTFNDTDLSIIRQRRG
                     PANRLGFAVQLCYLRFPGVILGVDELPFPP"
     gene            complement(225..785)
                     /locus_tag="MOX77_004822"
     CDS             complement(225..785)
                     /locus_tag="MOX77_004822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000147566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HCA3360182.1"
                     /translation="MTGQRIGYIRVSTFDQNPERQLEGVKVDRAFSDKASGKDVKRPQ
                     LEALISFARTGDTVVVHSMDRLARNLDDLRRIVQTLTQRGVHIEFVKEHLSFTGEDSP
                     MANLMLSVMGAFAEFERALIRERQREGIALAKQRGAYRGRKKSLSSERIAELRQRVEA
                     GEQKTKLAREFGISRETLYQYLRTDQ"
     gene            complement(911..1111)
                     /locus_tag="MOX77_004823"
     CDS             complement(911..1111)
                     /locus_tag="MOX77_004823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000993264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3330 domain-containing protein"
                     /protein_id="HCA3360183.1"
                     /translation="MNANEPSTSCCVCCKEIPLDAAFTPEGAEYVEHFCGLECYQRFQ
                     ARASTATETSVKPDACDSPPSG"
BASE COUNT          236 a          340 c          341 g          253 t
ORIGIN      
        1 gggcgggaac ggtagttcat cgacgcccag gatgacgccg ggaaagcgca ggtaacagag
       61 ctgcaccgcg aagcccagcc gattggctgg cccgcgccgc tgtcggatga tcgagaggtc
      121 ggtatcgttg aatgtgtaat gtcggatcag gtcgtccttg gagtccggca acgccagcag
      181 gctttcccgc tcggcggcgg acaggatgga acgacgtggc atatttactg atccgttctc
      241 aagtattgat acagggtttc gcgactgatt ccgaattcac gagcaagctt ggtcttttgc
      301 tcgccagcct cgacacgttg gcgcagttcg gcaatacgct cagacgacag ggatttcttc
      361 ctgccacggt aagccccgcg ttgcttggcg agcgcaatac cctcgcgctg acgctcgcgg
      421 atcagggcgc gctcgaactc ggcgaacgcg cccatcaccg agagcatcag gttcgccatc
      481 ggagagtctt cgccagtaaa actgaggtgt tccttgacga attcgatatg cacgccgcgt
      541 tgtgtcagcg tttgcacgat ccggcgcaaa tcatcgagat tgcgcgccag gcgatccatg
      601 ctatgcacca ccacggtgtc gccggtgcgg gcgaagctta tcagcgcttc cagttgcgga
      661 cgcttgacat ccttgccgga tgccttgtcg ctaaaagcgc gatcaacctt gacgccttcc
      721 agttgccgtt ccgggttctg gtcgaaggtg ctgaccctga tatacccaat gcgctgtcca
      781 gtcatggaat tccctgcaaa atgtcaggga agactctatg accttcaacg agatatgtca
      841 ataaattcaa aattcaatcc tatcctgacg caatttacac atggcatctg acatcaggtt
      901 agggtatgcc tcaacctgac ggcggcgaat cacaagcgtc cggtttgacg ctggtttcgg
      961 tcgcagtgct ggcccgcgcc tggaagcgct gatagcactc cagcccgcag aaatgctcca
     1021 cgtactcggc cccttccggc gtgaaggcgg catcgagcgg gatttccttg cagcacacgc
     1081 agcaactggt gctcggttca ttggcgttca tggtggtgtt cctccattgg ttgacgaagc
     1141 cgacgaaggc cgccgccggc atcggcctgg
//
LOCUS       DAGWFR010000399         1139 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.406, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000399 DAGWFR010000000
VERSION     DAGWFR010000399.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1139)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1139)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1139
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.406"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..>1139
                     /locus_tag="MOX77_004824"
     rRNA            <1..>1139
                     /locus_tag="MOX77_004824"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          281 a          261 c          370 g          227 t
ORIGIN      
        1 ggacgggtga gtaatgtctg ggaaactgcc tgatggaggg ggataactac tggaaacggt
       61 ggctaatacc gcataacgtc gcaagaccaa agagggggac cttcgggcct cttgccatca
      121 gatgtgccca gatgggatta gcttgttggt gaggtaacgg ctcaccaagg cgacgatccc
      181 tagctggtct gagaggatga ccagccacac tggaactgag acacggtcca gactcctacg
      241 ggaggcagca gtggggaata ttgcacaatg ggcgcaagcc tgatgcagcc atgccgcgtg
      301 tatgaagaag gccttcgggt tgtaaagtac tttcagcggg gaggaaggtg ttgtggttaa
      361 taaccgcagc aattgacgtt acccgcagaa gaagcaccgg ctaactccgt gccagcagcc
      421 gcggtaatac ggagggtgca agcgttaatc ggaattactg ggcgtaaagc gcacgcaggc
      481 ggtctgtcaa gtcggatgtg aaatccccgg gctcaacctg ggaactgcat tcgaaactgg
      541 caggcttgag tcttgtagag gggggtagaa ttccaggtgt agcggtgaaa tgcgtagaga
      601 tctggaggaa taccggtggc gaaggcggcc ccctggacaa agactgacgc tcaggtgcga
      661 aagcgtgggg agcaaacagg attagatacc ctggtagtcc acgccgtaaa cgatgtctac
      721 ttggaggttg tgcccttgag gcgtggcttc cggagctaac gcgttaagta gaccgcctgg
      781 ggagtacggc cgcaaggtta aaactcaaat gaattgacgg gggcccgcac aagcggtgga
      841 gcatgtggtt taattcgatg caacgcgaag aaccttacct ggtcttgaca tccacagaac
      901 tttccagaga tggattggtg ccttcgggaa ctgtgagaca ggtgctgcat ggctgtcgtc
      961 agctcgtgtt gtgaaatgtt gggttaagtc ccgcaacgag cgcaaccctt atcctttgtt
     1021 gccagcggtc cggccgggaa ctcaaaggag actgccagtg ataaactgga ggaaggtggg
     1081 gatgacgtca agtcatcatg gcccttacga ccagggctac acacgtgcta caatggcgc
//
LOCUS       DAGWFR010000400         1087 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.407, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000400 DAGWFR010000000
VERSION     DAGWFR010000400.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1087)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1087)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1087
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.407"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..>1087
                     /gene="metL"
                     /locus_tag="MOX77_004825"
     CDS             <1..>1087
                     /gene="metL"
                     /locus_tag="MOX77_004825"
                     /EC_number="1.1.1.3"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000110794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aspartate kinase/homoserine
                     dehydrogenase II"
                     /protein_id="HCA3360184.1"
                     /translation="CYTAEVADSVLKLLDDVGLPGELRLRQGLALVAMVGAGVTRNPL
                     HCHRFWQQLKGQPVEFTWQSEEGISLVAVLRTGPTESLIQGLHQSVFRAEKRIGLMLF
                     GKGNIGSRWLELFAREQSTLSARTGFEFVLAGVVDSRRSLLNYEGLDASRALAFFDDE
                     AVEQDEESLFLWMRAHPYDDLVVLDVTASEQLADQYLDFASHGFHVISANKLAGASAS
                     DKYRQIHDAFEKTGRYWLYNATVGAGLPINHTVRDLIDSGDTILSISGIFSGTLSWLF
                     LQFDGTVPFTDLVDQAWQQGLTEPDPRVDLSGKDVMRKLVILAREAGYDIEPDQVRVE
                     SLVPAHCEEGSIDHFFENGDALNEQMVQ"
BASE COUNT          213 a          274 c          358 g          242 t
ORIGIN      
        1 tgctataccg ccgaggtagc ggatagcgta ctgaaactcc tcgacgatgt cggactgccg
       61 ggcgaattgc gcctgcggca ggggctggcg ctggtggcga tggtcggtgc gggcgtcact
      121 cgcaatccgc tacactgcca tcgcttctgg cagcagttga aaggtcagcc agtggagttt
      181 acctggcagt cggaggaggg catcagtctg gtggcggtgc tgcgtaccgg cccgactgag
      241 agcctgattc aggggctgca ccagtctgtt ttccgcgccg aaaaacgcat tggcctgatg
      301 ctgttcggta aggggaacat cggctcccgt tggctggaac tatttgcccg tgaacaaagc
      361 acgctttccg cgcgtactgg ttttgaattt gtgctggcgg gcgtggtgga tagccgccgt
      421 agcctgttga attatgaagg gctggacgcc agccgcgcgc tggcattctt tgatgatgaa
      481 gccgttgagc aggacgaaga gtcgctattc ctgtggatgc gtgcgcatcc gtatgatgat
      541 ttagtggtgc tggatgtgac agcaagcgag caactggccg atcagtacct tgatttcgcc
      601 agccacggtt ttcatgtgat tagcgccaat aaactggcgg gcgcaagcgc cagcgataag
      661 tatcgccaga ttcatgacgc gtttgaaaaa accgggcgtt actggctgta taacgccacc
      721 gtgggcgcgg ggttgccgat caaccacacg gtgcgggatc tgattgacag cggcgatacg
      781 attctctcga tcagcgggat cttctccggg acgctatcct ggctgttcct gcaatttgac
      841 ggcacggtgc cgtttaccga tctggtggat caggcctggc agcaggggct gacggaaccc
      901 gatccgcgcg tcgatctttc cggaaaagat gtcatgcgta agctggtgat tctggcgcgc
      961 gaggcgggat acgacatcga gccggatcag gtgcgtgtag aatcgttggt gccggcgcac
     1021 tgtgaagaag ggtctatcga tcactttttc gaaaacggcg acgcgctgaa tgaacagatg
     1081 gtgcagc
//
LOCUS       DAGWFR010000401         1069 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.408, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000401 DAGWFR010000000
VERSION     DAGWFR010000401.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1069)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1069)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1069
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.408"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..>1069
                     /locus_tag="MOX77_004826"
     CDS             <1..>1069
                     /locus_tag="MOX77_004826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459912.1"
                     /note="catalyzes the formation of acetate from pyruvate;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ubiquinone-dependent pyruvate dehydrogenase"
                     /protein_id="HCA3360185.1"
                     /translation="FAAGAQAQLTGELAVCAGSCGPGNLHLINGLFDCHRNHVPVLAI
                     AAHIPSSEIGSGYFQETHPQELFRECSHYCELVSSPEQIPQVLAIAMRKAVLNRGVSV
                     VVLPGDVALKPAPENAVTHWYHAPHPVVTPAEEELKKLAQLLRYSSNIALMCGSGCAG
                     AHEELVALAAKLKAPIVHALRGKEHVEYDNPYDVGMTGLIGFSSGFHTMMNADTLILL
                     GTQFPYRAFYPSDAKIIQIDINPGSIGAHSKVDMALVGDIKATLRALLPLVEEKSNRK
                     FLDKALEHYRDARKGLDDLAKLSDKAIHPQYLAQQISHFAADDAIFTCDVGTPTVWAA
                     RYLKMNGKRRLLGSFNHGSMA"
BASE COUNT          234 a          325 c          291 g          219 t
ORIGIN      
        1 ctttcgccgc cggcgcacaa gcgcagctta ccggcgagct ggcagtgtgc gccggttcat
       61 gtggaccggg caacctgcac ctgatcaatg gcctgtttga ttgccaccgt aaccacgtcc
      121 ctgttctggc gatcgccgcc catattccgt ccagtgaaat cggcagcggt tatttccagg
      181 agacccaccc gcaggagttg ttccgtgaat gcagccacta ttgcgagttg gtttccagcc
      241 cggagcagat cccgcaggta ctcgccatcg ccatgcgcaa agcggtgcta aatcgcggcg
      301 tctccgtggt cgtacttccg ggtgacgtgg cgctgaaacc cgcgcctgaa aacgccgtca
      361 cccattggta ccatgccccg caccccgtcg ttacgccggc ggaggaagag ctgaaaaaac
      421 tggcgcaact gctgcgctac tccagcaata tcgcattgat gtgcggtagc ggctgcgcgg
      481 gcgcgcatga ggagttggtc gcgttggcgg caaaactaaa agcgccaatc gttcatgccc
      541 tgcgcggcaa agagcacgtt gagtacgata acccttatga tgtgggaatg accggcctga
      601 ttggcttctc ttctggcttc cacaccatga tgaacgccga tacgctgatc ctgctcggca
      661 cccagttccc ctatcgcgcc ttttatccga gcgatgccaa aatcattcag attgacatca
      721 acccgggcag tattggcgcg cacagcaaag tcgacatggc gctggtgggc gatattaaag
      781 ccacgcttcg cgccctgctg ccgctggtgg aagaaaaaag caatcgtaaa ttcctcgata
      841 aagctctgga acactatcgg gacgcccgta aagggcttga tgacttagcc aaactcagcg
      901 ataaagccat ccacccacaa tatctggcgc aacaaattag tcatttcgcc gctgacgacg
      961 ctatttttac ctgcgatgtc ggcacgccga ccgtctgggc ggcccgctat ctaaaaatga
     1021 acggcaagcg ccgcctgctg ggctcgttta accacgggtc aatggccaa
//
LOCUS       DAGWFR010000402         1066 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.409, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000402 DAGWFR010000000
VERSION     DAGWFR010000402.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1066)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1066)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1066
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.409"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..202
                     /locus_tag="MOX77_004827"
     CDS             <1..202
                     /locus_tag="MOX77_004827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459613.1"
                     /note="citrate-ACP transferase, the alpha subunit
                     catalyzes the formation of (3S)-citryl-CoA from acetyl-CoA
                     and citrate; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="citrate lyase subunit alpha"
                     /protein_id="HCA3360186.1"
                     /translation="AVNPARPELAERLKAAGMKVVSIEWLRERAQLLTGQPRPIEFTD
                     RVIAVVRYRDGSVIDVVHQVKE"
     gene            205..651
                     /gene="citX"
                     /locus_tag="MOX77_004828"
                     /pseudo
     CDS             205..651
                     /gene="citX"
                     /locus_tag="MOX77_004828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459612.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="citrate lyase holo-[acyl-carrier protein]
                     synthase"
     gene            623..>1066
                     /locus_tag="MOX77_004829"
     CDS             623..>1066
                     /locus_tag="MOX77_004829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triphosphoribosyl-dephospho-CoA synthase"
                     /protein_id="HCA3360187.1"
                     /translation="MMPIPVNPTNASIQPQSLYDAWADLAWRAMLTEVNLSPKPGLVD
                     RLNCGAHKDMALADFHRSAEAIRHWLPRFMEYGASCTRLPPESVLAGLRPLGMACEAA
                     MFRATAGVNTHKGSIFSLGLLCAAIGRLYQLRQPIAAETLCATAAD"
BASE COUNT          202 a          328 c          327 g          209 t
ORIGIN      
        1 cgccgtcaat ccggcgcgtc cggagttggc tgaacgcctg aaagcagcgg gaatgaaagt
       61 ggtatcgatt gagtggctgc gcgaacgcgc gcaactgctt accggtcagc cccgccctat
      121 cgaattcacc gaccgcgtga ttgctgtcgt gcgttatcgc gacggttcag tgatcgatgt
      181 ggtgcatcag gtgaaggaat aagccacgcc actccactgg tctcctttac cgtggtggcg
      241 ccaggcccga tgaaagacag cgcgttaacc cgccggatct ttaatcacgg cgtgactgcc
      301 ctgcacacgc tggcagaaga gtatggctgg accatccggg agcaggctgc actggcttcc
      361 gccagcgggc cggaagggtt gctggcgatt gacgcgcccg ctcaggcgct caaacaggcg
      421 accatcgcgc tggaacagcg ttatccactg gggcgcctgt gggatatcga tgtcctgacg
      481 gcggaaggcg aaatactctc tcgccgccat ttcgcgcttc ccgctcgccg ctgtctgctg
      541 tgcgggcaaa gcgcggctga atgcgcgcgg ggtaaaaccc acgcgctgac tgatttactg
      601 actcatatgg aggcgctgct gcatgatgcc gattcccgtc aacccgacta acgcctccat
      661 tcagcctcag tcgctgtatg acgcctgggc cgatttggcc tggcgcgcca tgctgaccga
      721 ggtaaattta tcgccaaaac ccggtctggt agaccgacta aactgcggcg cgcacaaaga
      781 tatggcgctg gcggattttc accgcagcgc ggaggcgatt cgacactggc tgccgcgctt
      841 tatggaatat ggcgccagct gcacgcgcct gccaccagag tcagttctgg cgggcctgcg
      901 tccattgggg atggcctgtg aagcagcgat gtttcgcgca acggcgggcg tcaataccca
      961 taaaggcagc attttctcgc tggggttact gtgcgccgcc attggccgcc tgtatcagct
     1021 acgccagccg atcgccgcag aaacactctg cgctaccgcc gccgat
//
LOCUS       DAGWFR010000403         1046 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.410, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000403 DAGWFR010000000
VERSION     DAGWFR010000403.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1046)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1046)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1046
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.410"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..>1046
                     /locus_tag="MOX77_004830"
     CDS             <1..>1046
                     /locus_tag="MOX77_004830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3360188.1"
                     /translation="TWQSATTWKLIALSNGSEFPGGAGASDYVSCLASDNPTAASITI
                     EPVNTSLWYDENSEHAVKVKKGDTLQLKVTVKDASGNPLPQAPFVLSRGDGIVSAVVI
                     DGDSLNDTATKIGGMTGENGSKIINVTRPDAHGTKVAITAALYDNASATASIDTIFTV
                     VTSPNSDKAKMWGHMPETTTAANGVVFKRPLLSAEIASGFTHGDNTENNEAWGIVDFE
                     VANDACGAGYVPTLADLQSLYDARPGGTMNTQQGWPLDGKNYQNSTADLSRSTENRYV
                     KSIDLRDGGISSLAWSEQLYFVCLQNAHPAATQITLTSPLYNDSDGFAKAKVGETIPV
                     IITTRDAQGNLAAD"
BASE COUNT          261 a          306 c          302 g          177 t
ORIGIN      
        1 cacctggcaa agcgccacaa cgtggaaact gatagcgctt tctaacggta gcgaatttcc
       61 gggcggcgct ggcgcatccg attacgtcag ttgccttgcc agcgataacc cgacggcagc
      121 ctccatcacc attgagccgg tgaatacgtc attgtggtat gacgagaaca gcgaacacgc
      181 ggtgaaggtg aaaaagggag atacgctcca gcttaaagtg acggtaaaag acgccagcgg
      241 caatccgctg ccgcaagcgc cgttcgtgct cagccgcggc gacggcatcg tctcggcggt
      301 agtgattgac ggcgattcgc tcaacgacac cgccaccaaa atcggcggca tgaccggtga
      361 aaacggcagc aaaatcatca acgtcacccg cccggatgcc cacgggacga aagtcgcgat
      421 tacggcggcg ctgtacgata acgccagcgc gacggccagc atcgacacta tttttactgt
      481 ggtcaccagc cctaatagcg acaaagccaa aatgtggggc catatgccgg aaacgaccac
      541 ggcggccaac ggcgtggtgt ttaagcgccc gctgttatcg gctgaaatcg ccagcggctt
      601 tacccacggc gacaatacgg aaaacaacga agcctgggga atcgtcgatt ttgaagtggc
      661 gaacgacgcc tgtggcgcgg gatacgtacc gacacttgcc gatctgcaat cgctgtacga
      721 cgccaggccc ggcggcacca tgaatacgca gcagggctgg ccgctggatg gtaaaaacta
      781 ccagaacagc accgctgatt tgagcaggag tacggaaaac cgctacgtta agtcgattga
      841 tctgcgcgat ggcggtatta gctcgctggc gtggagtgaa caactctatt tcgtctgctt
      901 gcaaaacgcc catccggcgg cgacgcagat aacgctcact tcgcctttgt ataacgacag
      961 cgacggattt gccaaagcga aagtcggcga gaccatcccg gtcatcatca ccacgcggga
     1021 cgcccagggc aacctggccg ccgaca
//
LOCUS       DAGWFR010000404         1035 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.411, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000404 DAGWFR010000000
VERSION     DAGWFR010000404.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1035)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1035)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.411"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..727
                     /locus_tag="MOX77_004831"
     CDS             <1..727
                     /locus_tag="MOX77_004831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HCA3360189.1"
                     /translation="QRFAPLSINHLDQFPVTTFSFNVPEGYSLGDAVQAILDTEKTLA
                     LPADITTQFQGSTLAFQAALGSTVWLIVAAVVAMYIVLGVLYESFIHPITILSTLPTA
                     GVGALLALIIAGSELDIIAIIGIILLIGIVKKNAIMMIDFALAAEREQGMSPRDAIFQ
                     ACLLRFRPILMTTLAALLGALPLMLSTGVGAELRRPLGIAMVGGLLVSQVLTLFTTPV
                     IYLLFDRLSLYVKSRFPRHKEEA"
     gene            728..>1035
                     /locus_tag="MOX77_004832"
     CDS             728..>1035
                     /locus_tag="MOX77_004832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HCA3360190.1"
                     /translation="MRFFALFIYRPVATILIAAAITLCGILGFRLLPVAPLPQVDFPV
                     IMVSASLPGASPETMASSVATPLERSLGRIAGVNEMTSSSSLGSTRIILEFNFDRDIN
                     G"
BASE COUNT          175 a          295 c          293 g          272 t
ORIGIN      
        1 gcagcgcttc gccccgctct ccatcaatca tttagatcag ttcccggtta cgacattttc
       61 gtttaacgtg ccggagggct attcgctcgg cgatgcggtg caggcgattc tcgatacgga
      121 aaaaacgctc gccctgccag cggatattac aacgcagttt cagggcagta cgctcgcctt
      181 ccaggcggcg ctgggcagca ccgtctggct tattgtcgcc gccgtggtgg cgatgtatat
      241 cgtgcttggc gtgctgtatg agagttttat ccatccgatt acgattctct caacgctgcc
      301 tacggcgggc gtcggcgcgc tgctggcgct gatcatcgct ggtagcgagc tcgatattat
      361 cgccattatc ggcattattt tactgatcgg tatcgtgaag aaaaacgcca tcatgatgat
      421 tgacttcgcc ctcgccgccg aacgcgaaca ggggatgagt ccgcgcgacg ctatcttcca
      481 ggcctgtctg ctgcgttttc gaccgattct gatgaccacg ctggcggcgt tgctcggggc
      541 attgccatta atgttgagta ccggcgttgg cgcggaatta cgtcgcccgt tggggatcgc
      601 gatggtgggc ggcttactgg tcagccaggt attaactctg tttaccactc cggtgattta
      661 tctcctgttt gaccgcctgt cgctgtacgt gaaaagtcgc tttccgcgcc ataaagagga
      721 ggcgtagatg cgctttttcg cccttttcat ctaccgcccg gtcgccacca ttttgattgc
      781 cgccgccatt acgctgtgcg gcattctggg ctttcgtctg ctgccggtcg ccccgctgcc
      841 gcaggtcgat ttcccagtga ttatggttag cgcctcgctg ccgggcgcct cgccggaaac
      901 catggcttcg tcggtggcga cgccgttgga acgttctttg ggacgcattg caggcgtcaa
      961 tgaaatgact tccagcagct cgctcggcag tacgcgcatt attctcgaat ttaatttcga
     1021 tcgcgatatt aacgg
//
LOCUS       DAGWFR010000405         1009 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.412, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000405 DAGWFR010000000
VERSION     DAGWFR010000405.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1009)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1009)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1009
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.412"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(158..>1009)
                     /locus_tag="MOX77_004833"
     CDS             complement(158..>1009)
                     /locus_tag="MOX77_004833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017455864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HCA3360191.1"
                     /translation="GLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDV
                     DVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWRNMNVPGEDQYRTK
                     GVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKADQVLQD
                     KVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIGLLPNTH
                     WLEGVLERNRMGEIIIDAKCETSVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAFDY
                     LIRTKIA"
BASE COUNT          212 a          301 c          242 g          254 t
ORIGIN      
        1 tctgttatta acagacggtt tcagagtatt gataatgaag aacgtgtttt acccggtggc
       61 gttccccagg cataaacacc gcaggcccga atagcttaca ctatcgggcc atttacgatg
      121 gccagttaac tggccttgca ggtgtgctta cttcttttta tgcgattttg gtgcgaatca
      181 gataatcaaa ggcgctcaac gaggctttcg ccccttcgcc tgtggcgatg ataatctgtt
      241 tgtaaggaac ggtggtgcaa tcgcctgcgg cgaagacgcc cttaacgctg gtttcacatt
      301 tggcgtcaat aatgatctcg cccatgcggt tacgctcaag cacgccttcc agccagtggg
      361 tattcggcaa aagaccaatc tgcacaaaaa ttcctgccag cgcgacgcta tgaatatcgc
      421 cgctgacacg gtcacgatac tccagtccca ccactttcga accgtcgccc ttcacttctg
      481 tcgtttgcgc attcaaaatg atatcgacat ttttcaggct acgcactttg tcctgtagca
      541 cctgatccgc cttcatctcc ggcgcgaact ccagcaacgt aacatgttct acaatacctg
      601 ccagatcgat agccgcttcg acgccggagt tgccgccgcc gatgaccgcc acacgcttgc
      661 ctttaaataa cggaccgtcg cagtgcgggc aataggtgac gcctttggtg cgatactgat
      721 cctcgcccgg cacattcata ttgcgccatt tcgcgccggt ggcgatgatg atactgcgcg
      781 ctttcaagac tgcgccggac gccgtttcaa tctgatgcag gccgccttct gtcgctgccg
      841 gaaccagttt acttgcgctc tggctgtcga taacgtcaac gtcgtaatcg ctgacatgcg
      901 ctttcagcgc gcccgccagt ttctggcctt cggttttcgg caccgagata tagttttcga
      961 tatccacggt atccagcacc tgaccgccga agcgctcgcc catcagacc
//
LOCUS       DAGWFR010000406         1000 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.414, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000406 DAGWFR010000000
VERSION     DAGWFR010000406.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1000)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1000)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1000
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.414"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..314)
                     /locus_tag="MOX77_004834"
     CDS             complement(<1..314)
                     /locus_tag="MOX77_004834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001399683.1"
                     /note="Sms; stabilizes the strand-invasion intermediate
                     during the DNA repair; involved in recombination of donor
                     DNA and plays an important role in DNA damage repair after
                     exposure to mutagenic agents; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HCA3360192.1"
                     /translation="MAKAPKRAFVCNECGADYPRWQGQCSACQAWNTITEVRLAASPT
                     VARNERLSGYAGSAGVSKVQKLSDISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGG
                     NPG"
     gene            complement(398..>1000)
                     /gene="serB"
                     /locus_tag="MOX77_004835"
     CDS             complement(398..>1000)
                     /gene="serB"
                     /locus_tag="MOX77_004835"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HCA3360193.1"
                     /translation="QIECIDEIAKLAGTGEKVAEVTERAMRGELDFTASLRSRVATLK
                     GADADILRQVRGNLPLMPGLTQLVLKLEALGWKIAIASGGFTFFADYLRDQLRLTAAV
                     ANELEIMDGKFTGHVIGDIVDAEYKANTLLRLAQEHDIPLAQTVAIGDGANDLPMIKA
                     AGLGIAFHAKPKVNEKTEITIRHADLMGVFCILSGSMNQK"
BASE COUNT          203 a          312 c          262 g          223 t
ORIGIN      
        1 ccggggttac cgccaatcaa aatggcgctg ccgggtacca ccccgccgcc cagcacgcgg
       61 tcaaactctt taaaaccggt agaaaagcgc ggcagttcct caagactgat gtcagacagt
      121 ttctgcactt ttgatacgcc cgcactgccg gcgtatccgc tcagacgttc gttacgcgcc
      181 accgtcggcg acgcggcaag gcgcacctca gtaatggtgt tccaggcctg gcaggcgctg
      241 cactgcccct gccagcgtgg gtaatcggca ccacattcat tacaaacaaa ggcgcgtttg
      301 ggagcttttg ccacgtttta cctctttcgt taacgctgtt gccggatggc gctggcgctt
      361 atccggccta cggtcgcctt gccattgggc agattaatca tttctggttc atgctgccgg
      421 agagaatgca aaacacgccc atcaggtcag cgtggcggat cgtaatctcc gtcttttcgt
      481 ttacttttgg cttggcatgg aaggcaatac ctaaccctgc cgctttgatc attggcagat
      541 cgttagcgcc gtcgccaatc gccaccgtct gcgccagcgg gatgtcatgc tcttgcgcca
      601 gacgaagcaa ggtattggct ttatactcag catccacaat atcgccgata acgtgaccgg
      661 taaatttacc gtccatgatc tccagctcat tggcgaccgc cgccgtcagg cgtagctggt
      721 cacgcagata gtcggcgaag aaagtgaagc cgccggaggc gatagcgatt ttccagccga
      781 gcgcttccag ttttagcacc aactgcgtta atcctggcat tagcggcaga ttcccgcgca
      841 cctggcgcaa aatatcggca tccgcgcctt tcagcgtcgc cacgcggctg cgcaggctgg
      901 cggtaaaatc aagctcgccg cgcatcgcgc gctccgtcac ttcagccacc ttctcaccgg
      961 taccggccag cttagcgatt tcatcgatac actcaatctg
//
LOCUS       DAGWFR010000407          975 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.415, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000407 DAGWFR010000000
VERSION     DAGWFR010000407.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 975)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 975)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..975
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.415"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..528
                     /locus_tag="MOX77_004836"
     CDS             <1..528
                     /locus_tag="MOX77_004836"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459479.1"
                     /note="catalyzes the DNA-template-directed extension of
                     the 3'-end of a DNA strand; the tau chain serves as a
                     scaffold to help in the dimerizaton of the alpha,epsilon
                     and theta core complex; the gamma chain seems to interact
                     with the delta and delta' subunits to transfer the beta
                     subunit on the DNA; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HCA3360194.1"
                     /translation="TPVKKEAYRWKATTPVVQTKEVVATPKALKKALEHEKTPELAAK
                     LAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKEQNGNAVCLHLRSTQRHLNSSGAQQ
                     KLAQALSDLTGTTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLR
                     RFFDAELDEESIRPI"
     gene            574..903
                     /locus_tag="MOX77_004837"
     CDS             574..903
                     /locus_tag="MOX77_004837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001364632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HCA3360195.1"
                     /translation="MFGKGGLGNLMKQAQQMQEKMQKMQEEIAQLEVTGESGAGLVKV
                     TINGAHNCRRVEIDPSLLEDDKEMLEDLVAAAFNDAARRIEETQKEKMASVSSGMQLP
                     PGFKMPF"
     gene            903..>975
                     /gene="recR"
                     /locus_tag="MOX77_004838"
     CDS             903..>975
                     /gene="recR"
                     /locus_tag="MOX77_004838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308552.1"
                     /note="involved in a recombinational process of DNA
                     repair, independent of the recBC complex; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecR"
                     /protein_id="HCA3360196.1"
                     /translation="MQTSPLLTQLMEALRCLPGVGPKS"
BASE COUNT          249 a          241 c          304 g          181 t
ORIGIN      
        1 acgccagtaa agaaagaggc ttatcgctgg aaggccacca cgccggtagt gcaaaccaaa
       61 gaagtggtgg ctacgccaaa agcgcttaag aaagctctgg agcatgaaaa aacgccggag
      121 ctggcggcta aactggcggc ggaagcgatt gagcgcgatc cgtgggcggc gcaggtaagc
      181 cagctttctt tgcctaagct ggtggagcag gtggcgctca atgcctggaa ggagcagaac
      241 ggcaacgcgg tttgtctgca tctgcgctcg acgcagcggc acctcaattc cagcggtgcg
      301 cagcaaaagc tggcgcaagc gctcagcgat ctgacgggaa cgacggttga actgaccatc
      361 gttgaagatg ataatcccgc ggtgcgtacg ccgctggaat ggcgtcaggc catttatgaa
      421 gagaaactcg cgcaagcgcg tgagtcaatt atcgcggata ataacattca gacgctgcgt
      481 cgattcttcg acgccgagct ggatgaagag agtatccgcc ccatttgatc gtaagcccgg
      541 cttgcgattg tgaaccatca agagagagag cttatgtttg gaaaaggcgg tctgggcaat
      601 ctgatgaagc aggcccagca gatgcaggaa aaaatgcaga aaatgcagga agagattgcg
      661 cagctggaag tgaccggcga atccggcgcg ggtctggtga aggttaccat caacggtgcg
      721 cataactgcc gccgtgtgga aattgaccca agcctgctgg aagatgacaa agagatgctg
      781 gaagatctgg tcgctgcggc cttcaacgat gcggcgcgcc gcattgaaga gacgcaaaaa
      841 gagaagatgg cttccgtctc ttccggtatg caactgccgc caggctttaa gatgccattc
      901 tgatgcaaac cagtccgctg ttaactcagc ttatggaagc gttgcgctgc cttccgggcg
      961 tcggccctaa gtcgg
//
LOCUS       DAGWFR010000408          971 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.416, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000408 DAGWFR010000000
VERSION     DAGWFR010000408.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 971)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 971)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..971
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.416"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..799)
                     /gene="tssG"
                     /locus_tag="MOX77_004839"
     CDS             complement(<1..799)
                     /gene="tssG"
                     /locus_tag="MOX77_004839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system baseplate subunit TssG"
                     /protein_id="HCA3360197.1"
                     /translation="MTGALDQAQKAPWRYGFLNLMRRVDAQLCDTPAGSIWQPRMEKF
                     RLGQTPTMTFAPREIAQVSWQDGRLHLSLYSLGLWGPNGPLPLHYTELALNRSESRHD
                     PTLVHFSNIFHYRWLTQFWQAWRSGQSAGGGLDKPEHDRFAFYIASISGQDLRESAES
                     PLSDHVRLAASAHLVRESRNPDGLAATLAHYFSVPFAVKEFALHWITVANDEITRLGT
                     PAQSSVLGNGALIGQAVPDMQYKFRLIIGPLTLEDYLRFLPGGNNLPV"
     gene            complement(796..>971)
                     /locus_tag="MOX77_004840"
     CDS             complement(796..>971)
                     /locus_tag="MOX77_004840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="type VI secretion system baseplate subunit TssF"
                     /protein_id="HCA3360198.1"
                     /translation="VDEEGFSGISPYLFGLVLEHYIARHVSINTFSQMTLHSMQRGHV
                     MTWPVRTGQRGSV"
BASE COUNT          202 a          287 c          292 g          190 t
ORIGIN      
        1 gcacgggcag attgttgccg ccgggcagaa aacgcaggta atcctccagc gtgagcgggc
       61 cgataattag ccggaatttg tactgcatat ccggtacggc ctggccgata agcgccccgt
      121 tgcccagcac cgaagactgc gcgggcgtgc ccagacgggt gatttcatcg ttcgccaccg
      181 ttatccagtg cagggcaaac tctttcaccg caaaaggtac gctgaaatag tgcgccagcg
      241 tggcggccag cccgtcagga ttgcgcgact cgcgtaccag atgggcggag gccgccaggc
      301 gaacatgatc tgacagcggg ctttcggcgc tttcccgtag atcctgcccg ctgatactgg
      361 cgatataaaa cgcaaaacgg tcgtgttccg gtttgtccag cccgccacca gcggactggc
      421 cgctgcgcca tgcctgccag aactgcgtca gccagcggta gtgaaaaata ttggaaaaat
      481 gaaccagcgt cggatcgtga cgactctctg agcgatttag cgccagctcg gtatagtgca
      541 gcggcaacgg gccgtttggc ccccatagtc cgaggctgta caggctcagg tgcaggcgtc
      601 catcctgcca gctgacctgg gcgatttccc gtggtgcaaa ggtcatcgtc ggcgtctgtc
      661 ccagacggaa tttttccatc cgaggctgcc agatactgcc tgccggagta tcacagagct
      721 gggcatccac gcgtcgcatc aggttcagga atccgtaacg ccagggggct ttctgcgcct
      781 ggtcgagagc gccggtcata cgctcccccg ttgcccggtt ctgaccggcc aggtcatgac
      841 atgcccgcgt tgcatcgagt gcagtgtcat ctgcgagaag gtattaatgg aaacatggcg
      901 ggcaatatag tgttccagca ccagaccgaa caggtaagga ctgataccgg aaaatccttc
      961 ttcgtccacg g
//
LOCUS       DAGWFR010000409          960 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.417, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000409 DAGWFR010000000
VERSION     DAGWFR010000409.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 960)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 960)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..960
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.417"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..170)
                     /locus_tag="MOX77_004841"
     CDS             complement(<1..170)
                     /locus_tag="MOX77_004841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3360199.1"
                     /translation="MMKRTISALALAFVASSAFASGTVTVFTQGNSEPKTLTDAERLL
                     DLVGQPRLATSW"
     gene            complement(167..805)
                     /locus_tag="MOX77_004842"
     CDS             complement(167..805)
                     /locus_tag="MOX77_004842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000824802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjbF family lipoprotein"
                     /protein_id="HCA3360200.1"
                     /translation="MKRLALILICLLLQACSATTKGLGDSLWDSLFGTPGVQLTDDDI
                     QNMPYASQYMQLNGGPQLFVVLAFSENGQQKWVTQDGATIVTQHGRLVKTLLGGDNLI
                     DVNNLATDPLAKPGQIIDGATWTRTLGWTEHRQVRYATARSVFTWRGTDRVNVGSEET
                     AVRVLDEEVTTDQTRWRNRYWVDSEGQIRQTEQYLGANYFPVKTTLIKAAKS"
     gene            complement(869..>960)
                     /locus_tag="MOX77_004843"
     CDS             complement(869..>960)
                     /locus_tag="MOX77_004843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3360201.1"
                     /translation="SAVGVALAATGGGDGSNTGTTTTTTTSTQ"
BASE COUNT          195 a          285 c          262 g          218 t
ORIGIN      
        1 caccagctcg ttgccaggcg cggctgtccg actaaatcga gcagacgctc agcgtctgtc
       61 agcgttttag gctcgctatt accctgggta aaaacggtaa cagtgccgct ggcaaaggcg
      121 gatgacgcga caaaggccag cgccagcgcg cttatcgtcc ttttcatcat gattttgccg
      181 ccttaatcag cgtggttttc accggaaagt aattcgcgcc cagatactgt tccgtctggc
      241 gaatttggcc ttcgctatca acccagtagc gattacgcca gcgcgtttga tcggtcgtca
      301 cttcttcatc taacacccgc acggcggttt cctcactgcc gacgttcact ctatcggtcc
      361 ctcgccatgt aaaaacggaa cgggcggtgg cgtaacgcac ctggcgatgt tcggtccagc
      421 ccagggtgcg agtccaggtc gcgccatcga taatctgtcc tggtttcgcc agcgggtcgg
      481 tcgccagatt attcacatcg atcaggttgt cgccgccgag cagcgttttg accagacggc
      541 catgctgcgt cacgatcgtc gcgccatcct gcgtcaccca tttctgctgc ccgttttccg
      601 agaaagcgag caccacaaac agttgaggac cgccgttaag ctgcatgtac tggctggcat
      661 aaggcatgtt ttgaatatcg tcatccgtta gctgtacgcc tggcgtaccg aacaaactgt
      721 cccacagtga atcgcccagg cctttggtgg tggccgaaca cgcctgtaat agcaggcaaa
      781 tcaggataag tgcgagtcgc ttcacgacgc ttctccagag gggcaaaata accacaccgg
      841 agtgtggtta tggttaaacg taccgatact actgggtact ggtggtcgtg gtggtcgtgg
      901 ttccggtatt ggaaccatcg ccgccgccgg ttgccgctaa cgcgacgccc accgccgaac
//
LOCUS       DAGWFR010000410          954 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.418, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000410 DAGWFR010000000
VERSION     DAGWFR010000410.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 954)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 954)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..954
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.418"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..>954
                     /locus_tag="MOX77_004844"
     CDS             <1..>954
                     /locus_tag="MOX77_004844"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461500.1"
                     /note="catalyzes the formation of
                     2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from
                     N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and
                     L-glutamine in purine biosynthesis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase"
                     /protein_id="HCA3360202.1"
                     /translation="AFNNEFGRPALTGYFRTYEEKVNSHNGEELRGYHKPIMLAGGIG
                     NIRADHVQKGEIVVGAKLIVLGGPAMNIGLGGGAASSMASGQSDADLDFASVQRDNPE
                     MERRCQEVIDRCWQLGDANPILFIHDVGAGGLSNAMPELVSDGGRGGKFELRDILSDE
                     PGMSPLEIWCNESQERYVLAVAADQLPLFDELCKRERAPYAVIGDATEEQHLSLHDNH
                     FDNQPIDLPLDVLLGKTPKMTRDVQTLKAKGDALNRADITIADAVNRVLHLPTVAEKT
                     FLVTIGDRTVTGMVARDQMVGPWQVPVADCAVTTASLDSYY"
BASE COUNT          201 a          269 c          297 g          187 t
ORIGIN      
        1 cggcgtttaa caacgaattt ggtcgcccgg cgctgaccgg ttacttccgt acttatgaag
       61 agaaagtgaa cagccacaat ggcgaagagc tgcgtggcta tcacaagccg atcatgctgg
      121 cgggcgggat cggtaatatc cgcgccgatc acgtgcagaa aggcgagatc gtcgtaggcg
      181 cgaagctgat cgtccttggc ggcccggcga tgaatatcgg cctcggcggc ggcgcggcat
      241 cgtcaatggc ttccggccag tctgatgcgg atctcgattt tgcctctgtt cagcgcgaca
      301 acccggaaat ggaacgccgc tgccaggaag tgatcgaccg ctgctggcag ttgggcgacg
      361 ctaacccaat cctgtttatc catgatgtgg gcgcgggcgg tctctccaac gccatgccgg
      421 agctggtaag cgacggcggg cgcggcggga aattcgaact gcgcgacatt cttagcgacg
      481 agccgggcat gagcccgctg gaaatctggt gtaacgaatc ccaggagcgc tatgtgctgg
      541 cggtcgcggc tgaccagtta ccgctgttcg atgaactgtg taagcgcgaa cgcgcgccgt
      601 atgcggtcat tggcgacgct accgaagaac agcatctctc gttgcatgat aaccatttcg
      661 acaatcagcc gatcgatcta ccgctggatg tcctgctggg caaaacaccg aaaatgaccc
      721 gcgatgtgca aacattgaag gcgaaaggcg atgcgctgaa ccgcgcggat atcacgattg
      781 ccgacgcggt aaatcgtgtt ctgcatctgc cgaccgtggc ggaaaaaacc ttccttgtca
      841 ctattggcga ccgtaccgtc accggtatgg tggcgcgtga ccagatggtt ggcccgtggc
      901 aggtcccggt agctgactgc gcggtcacta ccgctagcct cgacagctac tacg
//
LOCUS       DAGWFR010000411          948 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.419, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000411 DAGWFR010000000
VERSION     DAGWFR010000411.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 948)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 948)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..948
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.419"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..>948)
                     /locus_tag="MOX77_004845"
     CDS             complement(<1..>948)
                     /locus_tag="MOX77_004845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system baseplate subunit TssF"
                     /protein_id="HCA3360203.1"
                     /translation="LHRYLPPNIHVAGALRITLRTFGELAFSELAGPARLPFYLCGEE
                     RIASHLFELLHTSAVATLAGEPGHFDGELNVNLQHPVAHEGLEPGQGLLPLAWNVFHG
                     HNLLHEFFACPERFYFFTPTGLSAGLQKVQGNVAEIVILLNRLPPDWLIHQTDAAQFS
                     LFCTPVINLFPRTTTRIEVTHSVTEQHLVVDRTRPLDYEVFSVQEVEGLEAETTRKMI
                     FRPLYHTRNNDEGNHGRYFSLRREPRRSSESARRYGTRTPYTGSEVFLSLVDQHEAPY
                     PENLRHITVTAMVTNRDLPCLIPRNGRDDLTVDAAIPVAG"
BASE COUNT          208 a          262 c          290 g          188 t
ORIGIN      
        1 gcccgccacc ggaatcgccg catctacggt cagatcatcc cggccattac gtggaataag
       61 gcagggcaga tcgcggttag tcaccattgc cgtgacggtg atatggcgca gattttccgg
      121 gtagggcgct tcatgctgat caaccagcga gaggaagact tccgagccgg tatagggggt
      181 tcgggtgcca tagcggcggg cgctttctga cgatcggcgc ggctcacgac gcagtgaaaa
      241 ataacgcccg tggttgcctt cgtcattatt acgggtgtga tacagcggac gaaaaatcat
      301 cttccgtgtg gtttccgctt ccaggccttc gacttcctgg acagaaaaca cctcgtaatc
      361 cagcggacgg gtacgatcca ccaccagatg ctgttccgtc acgctgtgag tgacttcaat
      421 ccgggtggtg gtgcggggaa acaggttgat caccggcgta cagaacaggc tgaactgtgc
      481 ggcgtccgtc tgatgaatca gccagtccgg cggcaggcgg ttaagcagta taacaatttc
      541 cgccacattg ccctgcacct tttgtagacc ggcagacaat ccggtcgggg tgaagaagta
      601 aaaccgttcc ggacaggcga aaaattcatg cagcagatta tgcccatgaa acacgttcca
      661 ggcgagcggc agcagcccct gccctggctc cagcccttcg tgcgccaccg ggtgttgaag
      721 attcacattc agttcgccgt caaagtgacc gggttctccg gccagtgtgg cgacggcgct
      781 ggtatgtagc agctcaaaca ggtgtgacgc aatgcgttct tcgccgcaga ggtaaaaggg
      841 cagccgtgcc ggaccggcca gctcgctgaa agccagttcc ccgaaggttc gcagggtgat
      901 gcgcaatgcc ccggcgacat gaatattagg cggcagatag cggtgcag
//
LOCUS       DAGWFR010000412          945 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.420, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000412 DAGWFR010000000
VERSION     DAGWFR010000412.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 945)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 945)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..945
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.420"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(126..>945)
                     /locus_tag="MOX77_004846"
     CDS             complement(126..>945)
                     /locus_tag="MOX77_004846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3360204.1"
                     /translation="GAPIGFFFANGTFPLLSWLLTDEQFMSWGWRVPFIFSAVLVIIG
                     LYVRVSLHETPVFAKVAAAKKQVKIPLGTLLTKHVHVTILGTFIMLATYTLFYIMTVY
                     SMTYSTAAAPVGLGLPRNEILWMLMMAVIGFGVMVPVAGLLADAFGRRKSMVIITTLI
                     ILFALFAFTPLLGSGNPALVFVFLLLGLSLMGLTFGPMGALLPELFPTEVRYTGASFS
                     YNVSSILGASVAPYIAAWLQSHYGLAAVGVYLASMAALTLIALLLTHETRHQAL"
BASE COUNT          240 a          285 c          261 g          159 t
ORIGIN      
        1 ccgccgccgc gctattagcg ctcatttcgc cctctgaggg cgaagccaat cagtgccgga
       61 cgattttaac gcagatgaag cagtaacgtg aaacgtcgcg ccggatgacg ccatccggcg
      121 ccctattaca acgcctgatg acgcgtctca tgggttaaca gcagtgcaat cagcgtcagc
      181 gccgccattg acgccaggta aacccctacc gccgccagcc cgtagtggct ttgcagccat
      241 gcggcaatat acggcgcgac ggaagcgccc agaatcgatg acacattgta ggaaaacgat
      301 gcgccggtat agcgtacttc cgtcggaaat agctccggca gcagcgctcc cattgggccg
      361 aaggtcagcc ccatcaggct cagacctaac aacaggaaca cgaataccag cgctggattg
      421 cctgaaccca gcagcggggt aaaggcgaac aacgcgaaga gaatgatgag cgtggtaatg
      481 atgaccatgc ttttccgacg gccaaatgcg tccgccagca ggccggcgac gggcaccatc
      541 acgccgaaac caatcaccgc catcatcagc atccacagta tttcattgcg cggcaagcca
      601 agccccaccg gcgcggcggc agtgctgtaa gtcatggaat agacggtcat gatatagaac
      661 agcgtgtagg tcgccagcat gataaacgtg ccgagaatgg ttacgtggac atgcttcgtc
      721 agcaacgtgc ccagcggtat ttttacctgc tttttcgctg cggcgacttt cgcaaacacc
      781 ggcgtttcat gcagcgacac gcgcacatac aggccgataa tcaccagtac cgccgagaag
      841 ataaacggca cgcgccagcc ccagctcata aattgctcgt cggtcagtag ccaggagagc
      901 aacgggaagg tgccattggc aaaaaagaag ccgatcggcg cgccc
//
LOCUS       DAGWFR010000413          939 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.421, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000413 DAGWFR010000000
VERSION     DAGWFR010000413.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 939)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 939)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.421"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..632)
                     /gene="folP"
                     /locus_tag="MOX77_004847"
     CDS             complement(<1..632)
                     /gene="folP"
                     /locus_tag="MOX77_004847"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001043260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HCA3360205.1"
                     /translation="MNKSLIIFGIVNITSDSFSDGGRYLAPDAAIAQARKLMAEGADV
                     IDLGPASSNPDAAPVSSDTEIERIAPVLDALKADGIPVSLDSYQPATQAYALSRGVAY
                     LNDIRGFPDAAFYPQLAKSSAKLVVMHSVQDGQADRREAPAGDIMDHIAAFFDARIAA
                     LTGAGIKRNRLVLDPGMGFFLGAAPETSLSVLARFDELRLRFDLPVLLSVS"
BASE COUNT          241 a          237 c          271 g          190 t
ORIGIN      
        1 gaaacagaca gaagcaccgg caaatcgaag cgcagccgca attcatcgaa ccgcgccagc
       61 accgagagcg aggtttcggg agcagccccc agaaaaaacc ccatgccggg atcaaggaca
      121 aggcggttgc gtttgatacc ggcacccgtc agcgccgcga tgcgcgcgtc aaagaacgcc
      181 gcaatgtgat ccatgatgtc gccagcgggt gcctcgcgcc gatctgcctg cccgtcttgc
      241 accgaatgca taacgacgag tttggcagat gatttcgcca attgcggata gaacgcagcg
      301 tctggaaaac cgcgaatatc attgagatag gccacaccac gcgacaaggc ataggcttgc
      361 gtcgcgggtt gataactgtc gagcgagacg ggaatgccat ctgccttgag cgcgtccagc
      421 accggcgcga tacgctcgat ttctgtgtcg gacgaaacag gcgcggcgtc ggggttgctg
      481 gatgccggac cgaggtcgat cacatctgcc ccctcggcca tcagcttacg cgcctgcgca
      541 atggctgcgt ctggcgccag ataccggcct ccatcggaga aactgtccga ggttatgttg
      601 acgatgccga aaatgatgag cgatttattc atgggggctt ctataataat aataatcgag
      661 catgagtctc atacggatgc tcgggtcgaa agggaatccc caggcgagta acctgtttgc
      721 ggtgatccat tagctgcagg agcagaatag catacatctg gaagcaaagc caggaaagcg
      781 gcctatggag ctgtgcggca gcgctcagta ggcaattttt caaaatattg ttaagccttt
      841 tctgagcatg gtatttttca tggtattacc aattagcagg aaaataagcc attgaatata
      901 aaagataaaa atgtcttgtt tacaatagag tgggggggg
//
LOCUS       DAGWFR010000414          900 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.422, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000414 DAGWFR010000000
VERSION     DAGWFR010000414.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 900)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 900)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..900
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.422"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..595
                     /locus_tag="MOX77_004848"
     CDS             <1..595
                     /locus_tag="MOX77_004848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TOBE domain-containing protein"
                     /protein_id="HCA3360206.1"
                     /translation="EPLSNLDAKLRVQMRLELQHLHRRLRTTSLYVTHDQVEAMTLAQ
                     RVMVMNKGVAEQIGTPVEVYEKPASRFVASFIGSPAMNLLDGVISASGDRFELPGGLA
                     LPIGAGYRGHAGRKMTLGIRPEHIALSSQAEGGVPLTVDTLEILGADNLAHGRWGDQK
                     LVVRLAHQQRPAAGSTLWLRLPEHQRHLFDGETGQRV"
     gene            592..>900
                     /gene="ugpQ"
                     /locus_tag="MOX77_004849"
     CDS             592..>900
                     /gene="ugpQ"
                     /locus_tag="MOX77_004849"
                     /EC_number="3.1.4.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462454.1"
                     /note="hydrolyzes diesters during transport at the inner
                     face of the cytoplasmic membrane to glycerol-3-phosphate
                     and alcohol; induced when cells are starved for inorganic
                     phosphate; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HCA3360207.1"
                     /translation="MSNWPYPHIVAHRGGGKLAPENTLAAIDVGARYGHTMIEFDAKL
                     SKDGEIFLLHDDNLERTSNGWGVAGELNWQDLLRVDAGGWFSGEFKGEPLPLLSQVAE
                     R"
BASE COUNT          176 a          226 c          306 g          192 t
ORIGIN      
        1 cgaaccgctc tctaacctcg acgccaagct gcgcgtgcag atgcgtctgg agttacaaca
       61 tctgcatcgt cgccttcgta ccacctcgct ctatgttact cacgatcagg tagaggcgat
      121 gacgctggcc cagcgggtga tggtgatgaa taaaggcgtc gcagaacaga ttggcacgcc
      181 ggtagaggtg tatgaaaaac cggccagtcg cttcgtggcg agctttattg gcagcccggc
      241 gatgaatctg ttggacggcg ttatcagcgc ttccggcgac cgtttcgaat tgcctggcgg
      301 tctggcgttg ccgattggtg cgggctatcg gggtcatgct ggacgtaaaa tgacgctggg
      361 tatccgcccg gagcatattg cgttaagctc gcaggcggaa ggcggcgtgc cgttaacggt
      421 agacacgctg gagattctgg gcgcggataa tctggcgcat gggcgctggg gcgatcagaa
      481 actggtggtg cggttggcgc atcagcagcg cccggcggcg ggcagtacgc tatggctgcg
      541 tctgccggaa catcagcgac atctttttga tggcgaaaca ggacaacgtg tatgagtaac
      601 tggccttatc ctcacattgt cgcccatcgc ggcggcggta aactggcgcc ggaaaacact
      661 ctggcggcga ttgacgtggg cgcgcgatac gggcacacca tgattgagtt tgatgccaag
      721 ctgtcgaaag acggcgaaat tttcctgctg catgacgata acctggagcg caccagcaat
      781 ggttggggtg tggcgggcga gttgaactgg caggatttat tgcgtgtgga cgctggcggt
      841 tggtttagcg gcgaatttaa aggcgagccg ctgccgttgc tctcgcaggt ggcggagcgc
//
LOCUS       DAGWFR010000415          868 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.423, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000415 DAGWFR010000000
VERSION     DAGWFR010000415.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 868)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 868)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..868
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.423"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..>868
                     /locus_tag="MOX77_004850"
     CDS             <1..>868
                     /locus_tag="MOX77_004850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001138064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Tn3 family transposase"
                     /protein_id="HCA3360208.1"
                     /translation="CALSELKNSLRSGDIWVQGSRQFKDFEDYLVPPEKFTSLKQSSE
                     LPLAVATDCEQYLHERLTLLEAQLATVNRMAAANDLPDAIITESGLKITPLDAAVPDT
                     AQALIDQTAMVLPHVKITELLLEVDEWTGFTRHFTHLKSGDLAKDKNLLLTTILADAI
                     NLGLTKMAESCPGTTYAKLAWLQAWHTRDETYSTALAELVNAQFRHPFAGHWGDGTTS
                     SSDGQNFRTASKAKSTGHINPKYGSSPGRTFYTHISDQYAPFHTKVVNVGLRDSTYVL
                     DGLLYHESDLRIE"
BASE COUNT          195 a          286 c          243 g          144 t
ORIGIN      
        1 gtgcgcgctg tccgagttga agaactccct gcgctcgggc gacatctggg tgcagggttc
       61 acgccagttc aaggacttcg aggactacct ggtaccgccc gagaagttca ccagcctcaa
      121 gcagtccagc gaattgccgc tggccgtggc caccgactgc gaacaatatc tgcatgagcg
      181 gctgacgctg ctggaagcac aacttgccac cgtcaaccgc atggcggcag ccaacgacct
      241 gccggatgcc atcatcaccg agtcgggctt gaagatcacg ccgctggatg cggcggtgcc
      301 cgacaccgcg caggcgctga tagaccagac agccatggtc ctgccgcacg tcaagatcac
      361 cgaactgctg ctcgaagtcg atgagtggac gggcttcacc cggcacttca cgcacttgaa
      421 atcgggcgat ctggccaagg acaagaacct gttgttgacc acgatcctgg ccgacgcgat
      481 caacctgggc ctgaccaaga tggccgagtc ctgccccggc acgacctacg cgaagctcgc
      541 ttggctgcaa gcctggcata cccgcgacga aacgtactcg acagcgttgg ctgaactggt
      601 caacgctcag tttcggcatc cctttgccgg gcactggggc gatggcacca catcatcatc
      661 ggacggacag aatttccgaa ccgctagcaa ggcaaagagc acggggcaca tcaacccaaa
      721 atatggcagc agcccaggac ggactttcta cacccacatc tccgaccaat acgcgccatt
      781 ccacaccaag gtggtcaatg tcggcctgcg cgactcaacc tacgtgctcg acggcctgct
      841 gtaccacgaa tccgacctgc ggatcgag
//
LOCUS       DAGWFR010000416          849 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.424, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000416 DAGWFR010000000
VERSION     DAGWFR010000416.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 849)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 849)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..849
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.424"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..374)
                     /locus_tag="MOX77_004851"
     CDS             complement(<1..374)
                     /locus_tag="MOX77_004851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCA3360209.1"
                     /translation="MKRLCDPLLWLIVLFLLLLFGLPYSQPFFAALFPDLPRPVYQQE
                     SFAALALAHFWLVGISSLFAVVVGVGAGIAVTRESGKEFRPLVETIAAVGQTFPPVAV
                     LAIAVPVMGFGQQPAIIALILYG"
     gene            complement(358..>849)
                     /locus_tag="MOX77_004852"
     CDS             complement(358..>849)
                     /locus_tag="MOX77_004852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCA3360210.1"
                     /translation="PQVLLMDEPFGALDPVTRGALQQEMTRIHQLLGRTIVLVTHDID
                     EALRLADHLVLMDGGHVIQQGSPLSMLTSPENDFVQAFFGRSELGVRLLSLRSVGDYV
                     RRHEQLSGDALVEEMTLRDALSMFVARRCDVLPVANQQGEPCGTLHFRDLLSETSPRE
                     TTV"
BASE COUNT          208 a          263 c          244 g          134 t
ORIGIN      
        1 ccatacagga tcaaggcgat aatggccggt tgctgaccaa aacccatgac gggtaccgcg
       61 atcgccagta ccgcgaccgg cggaaaggtc tgcccgacgg cggcgatagt ctccactagg
      121 ggacgaaact ctttcccact ttctcgcgtg accgcaatcc ctgcgccgac gcccaccacg
      181 acggcaaaca aacttgagat gcccaccaac cagaaatggg cgagcgcgag ggcggcaaaa
      241 ctctcctgtt ggtagaccgg gcgcggtaaa tcgggaaaca gcgcggcgaa gaacggctgg
      301 ctataaggca atccaaacag cagaagcaag aacagaacaa taagccagag aagcggatca
      361 cacagtcgtt tcacgggggg acgtctccga aagcagatcg cggaaatgga gcgtaccgca
      421 gggctcgccc tgctgattcg ccaccggcag gacgtcgcac cgacgggcga caaacatcga
      481 tagcgcatcg cgtagcgtca tctcttccac cagcgcgtcg ccgctgagct gttcatgccg
      541 acgtacataa tcgcctacgc tacgtaacga aagcagcctt acgcccagct cgctgcggcc
      601 aaaaaatgcc tgcacgaaat cattttccgg cgaggtcagc atagaaagtg gcgatccctg
      661 ttggataacg tggcccccgt ccatcagcac cagatggtcg gcgaggcgta gcgcctcgtc
      721 gatgtcgtgc gtcaccagta cgatggtgcg ccccagtagc tgatgaatgc gggtcatctc
      781 ctgctgcaat gcgccgcgcg ttaccggatc aagcgcgccg aaaggctcgt ccatcagcaa
      841 tacctgcgg
//
LOCUS       DAGWFR010000417          835 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.425, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000417 DAGWFR010000000
VERSION     DAGWFR010000417.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 835)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 835)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..835
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.425"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..>835
                     /locus_tag="MOX77_004853"
     CDS             <1..>835
                     /locus_tag="MOX77_004853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459390.1"
                     /note="with SbcD cleaves DNA hairpin structures; also has
                     5' single-strand endonuclease activity; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exonuclease subunit SbcC"
                     /protein_id="HCA3360211.1"
                     /translation="LSANQTRRDALEKEVKTLAEEGAALRGQLDALTQQLQRDESEAQ
                     SLLQEEQALTEEWQTLCATLGVQLQPQEDLAGWLTAAEEHEQQLDQLSQRHALQTQIA
                     AHTEQVARFTAQIAQRQASLTADLAQYTLSLPAPEDEASWLNERADEAKIWQQRQTEF
                     ADLQTQIDRLAPLLETLPQTDTADSDDDVPLDNWRQTHDECVSLQSQLQTLQEQTTQE
                     QQRAAEAIAHFDAALKNSPFDSQATFLAALLDEETVTRLEKQQQTLESQLQQAKALSA
                     QS"
BASE COUNT          219 a          228 c          257 g          131 t
ORIGIN      
        1 ctgagcgcga atcaaacccg ccgcgacgcg ctggaaaaag aggtcaaaac gctggcggaa
       61 gaaggcgctg cgctgcgagg acagttagat gccttaacgc aacaattaca gcgggatgaa
      121 agcgaggcgc agtcgttgtt gcaggaggag caagcgctta ctgaggaatg gcaaacgctg
      181 tgcgctacgc tgggcgttca gctccagccg caagaagacc tcgctggctg gctgaccgcc
      241 gcggaagagc atgagcaaca gttggatcag ctcagccagc gtcatgctct acaaacgcaa
      301 atcgcggcgc atactgaaca ggtagcgcgc tttaccgcgc agattgcaca gcgtcaggcg
      361 tcgctgacgg ctgatttggc gcagtatacg ctttcccttc ctgcgccaga agacgaggca
      421 tcctggctga atgagcgcgc cgacgaagcg aaaatatggc aacagcgtca gacagagttc
      481 gcggatttgc aaacgcagat cgacaggctt gccccgttgc tggagacgct accgcaaacg
      541 gataccgcgg attccgacga cgacgtgccg ctggataact ggcggcagac gcatgatgag
      601 tgcgtgtcat tacaaagcca gttgcaaacc ctgcaggaac agacgacgca ggaacagcag
      661 cgcgccgccg aggcgatagc gcactttgat gcggcgttaa aaaatagccc gtttgacagc
      721 caggcaacgt tcctggcggc gttgctggat gaagagaccg tgacccgtct ggaaaaacaa
      781 caacaaacgc tggaaagtca gctacaacaa gcgaaggcgt taagcgcgca gtccg
//
LOCUS       DAGWFR010000418          834 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.426, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000418 DAGWFR010000000
VERSION     DAGWFR010000418.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 834)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 834)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..834
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.426"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            1..78
                     /locus_tag="MOX77_004854"
                     /pseudo
     CDS             1..78
                     /locus_tag="MOX77_004854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461400.1"
                     /note="ethanolamine utilization protein; involved in the
                     degredation of ethanolamine; incomplete; partial in the
                     middle of a contig; missing N-terminus and C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization protein EutM"
     gene            205..492
                     /gene="eutN"
                     /locus_tag="MOX77_004855"
     CDS             205..492
                     /gene="eutN"
                     /locus_tag="MOX77_004855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization microcompartment
                     protein EutN"
                     /protein_id="HCA3360212.1"
                     /translation="MKLAVVTGQIVCTVRHQGLAHDKLLMVEMIDAQGNPDGQCAVAI
                     DSIGAGTGEWVLLVSGSSARQAHRSELSPVDLCVIGIVDEVVAGGKVVFHK"
     gene            504..>834
                     /locus_tag="MOX77_004856"
     CDS             504..>834
                     /locus_tag="MOX77_004856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3360213.1"
                     /translation="MNQQDIEQVVKAVLLKMKDSSQPASTVHEMGVFASLDDEVAAAK
                     RAQQGLKSVAMRQLAIHAIREAGEKHARELAELAVSETGMGRVDDKFAKNVAQARGTP
                     GVECLSPQ"
BASE COUNT          198 a          214 c          270 g          152 t
ORIGIN      
        1 ggcgagctgg tctctgtaca cgtgattcca cgcccgcacg gcgatctgga agaagtgttc
       61 ccgatcagct tcaaaggcgc agcaacattt gatggtaggc cggataagac gcgcagcgtc
      121 gccatccggc atgaatgcgc gccattgcct gatagtgcgc agattcaagg cctacgaccc
      181 aacgggcaat ccatggaggc ggatatgaaa ctggcagtcg tcacaggaca aatcgtatgt
      241 accgtccgcc atcagggact ggcgcatgac aaattgctga tggtggaaat gatcgatgcc
      301 cagggcaacc ccgacgggca gtgtgccgtc gctatcgaca gtatcggggc gggaaccgga
      361 gagtgggtac tgctggtcag cggcagttcc gcgcgccagg cgcatcgcag cgaattatca
      421 ccggtcgatc tgtgcgtcat tggcatcgtc gatgaagtgg tggctggcgg gaaagtggtt
      481 ttccataaat aggactgaac atcatgaatc aacaggatat tgaacaggtg gtgaaagcgg
      541 tgctgctgaa aatgaaagac agcagccagc cggccagcac tgttcatgag atgggcgttt
      601 ttgcctccct ggatgacgaa gtggcggcag caaaacgggc ccagcagggg ctgaagagcg
      661 tggcgatgcg ccagcttgcc attcatgcca ttcgcgaggc gggcgaaaaa cacgcccgag
      721 aattagcgga acttgccgtc agcgaaaccg gcatgggacg cgttgacgat aaatttgcca
      781 aaaacgtggc gcaggcgcgc ggcacgccgg gcgtcgagtg tttatctccg cagg
//
LOCUS       DAGWFR010000419          820 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.427, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000419 DAGWFR010000000
VERSION     DAGWFR010000419.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 820)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 820)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..820
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.427"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..418)
                     /locus_tag="MOX77_004857"
     CDS             complement(<1..418)
                     /locus_tag="MOX77_004857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SelA-like pyridoxal phosphate-dependent enzyme"
                     /protein_id="HCA3360214.1"
                     /translation="MPSIFEKYQLKQVINASGRMTALGVSTPRPEVIDAAMAGMNQYF
                     EMKDLVNKTGEYIAKLLEVEGATVVSCASAGLAQSVAAVLVQDSDWLLENLHVTPIEN
                     NEIVLPKGHNVNFGAPVGTMVALGGGKLVEAGYANEC"
     gene            complement(402..>820)
                     /locus_tag="MOX77_004858"
     CDS             complement(402..>820)
                     /locus_tag="MOX77_004858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HCA3360215.1"
                     /translation="GHGTASLSFAVAKRAISLGILPHTISSDIYCRNRINGPVHSLAN
                     VMSKFLAIGMSLPQVIACVTANAADSLNLKTKGRLQPGLDADLTLFTLKRQPTVLVDA
                     ENDSLQAEELLTPLAAIRAGKGYMTEQGSAEHAFDF"
BASE COUNT          166 a          243 c          218 g          193 t
ORIGIN      
        1 aacattcgtt ggcgtaaccg gcttccacca gtttgccgcc gcccagcgcc accatcgttc
       61 ccaccggcgc gccaaagttg acgttgtggc cctttggcag gacgatttcg ttattttcaa
      121 tcggtgtaac gtgcaggttt tccagcagcc agtcgctgtc ctgaaccagt accgcggcaa
      181 ccgactgggc aaggcccgca ctggcgcagg agactaccgt cgccccttcc acttccagca
      241 atttcgcaat gtactcaccg gttttattca ccagatcttt catctcgaaa tactgattca
      301 ttccggccat cgccgcgtct atcacttccg ggcgcggtgt ggagacgccg agcgccgtca
      361 tacgtccgga ggcgttaatc acctgtttta attgatactt ctcaaaaatc gaaggcatgt
      421 tccgcgctcc cttgttcggt catatagccc ttgcctgcgc gtatcgcggc aagcggcgtc
      481 agcaattctt cagcctgtaa gctgtcgttt tccgcgtcta ccaacacggt gggctggcgt
      541 ttaagcgtaa agagggtcag gtcggcatcc agacctggct gaagacgtcc tttggttttc
      601 agattcaggc tatcggcggc attggccgtc acgcacgcaa tgacctgcgg cagcgacatg
      661 ccgatggcga ggaatttcga catcacatta gccagcgaat gtaccgggcc gttgatgcgg
      721 ttacggcagt agatatcgga actgatggta tgcggtaaaa tccccaggct aatagcgcgt
      781 ttagccaccg caaagctcag gctggcggta ccatgcccga
//
LOCUS       DAGWFR010000420          817 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.428, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000420 DAGWFR010000000
VERSION     DAGWFR010000420.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 817)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 817)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..817
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.428"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            303..545
                     /gene="cedA"
                     /locus_tag="MOX77_004859"
     CDS             303..545
                     /gene="cedA"
                     /locus_tag="MOX77_004859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division activator CedA"
                     /protein_id="HCA3360216.1"
                     /translation="MMKPLRQQNRQIISYIPRVEPAPPEHAIKMDTFRDVWILRGKYV
                     AFVLTGESFQRSPAFSVPESAQRWANQVRQENEIAD"
     gene            complement(648..>817)
                     /locus_tag="MOX77_004860"
     CDS             complement(648..>817)
                     /locus_tag="MOX77_004860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cation:dicarboxylase symporter family
                     transporter"
                     /protein_id="HCA3360217.1"
                     /translation="TLVALLISVEPLIDMGRTALNVSGSMTAGTLTSQWLKQTDKTIL
                     DSEEDAELAHR"
BASE COUNT          199 a          191 c          228 g          199 t
ORIGIN      
        1 gacggtgcca gggagtccag gccgggctgt gattcacggg tatcatgcac gggggactga
       61 tggggggatt tttcattatg cgacattgaa ctcgtctcct gctttcatca ctgaaatggg
      121 cgtggtagta gtcaaaatca ctctaactat agaacatttc agcaattatg ccgggggaga
      181 gcggaacggc agacagggta caacggggaa atcgcacgcg cggaacagga cgtcgggggc
      241 gaagatcggc taaaatagtg tttttctgat ttttagcctt agcctctttt agtgaagcat
      301 taatgatgaa acctcttcgc cagcaaaatc gccagattat tagctatatt ccgcgtgttg
      361 aacccgcgcc gccggaacat gcgataaaaa tggatacgtt tcgcgacgtc tggatactgc
      421 gcggtaaata tgttgccttt gttctgacgg gggagtcatt tcaacggtcg cccgccttta
      481 gcgtgccaga atcggcgcaa cgttgggcga atcaggttcg ccaggaaaac gaaatcgctg
      541 actaagaaaa aaacaaaacg ccggtactgg agaccggcgt ttttagtgac agacattttg
      601 agttgccgat cgtcgtgtct cagacgatgt gaactcccga taatgtatta tcgatgcgcc
      661 agttcagcgt cttcttcgct atcgagaatg gttttatcgg tctgcttcag ccactggctg
      721 gtcagcgtac ccgcggtcat tgagccgctc acgttcagtg cggtacggcc catatcaatc
      781 aacggttcga cggagattaa cagcgcgacc agcgtga
//
LOCUS       DAGWFR010000421          811 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.429, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000421 DAGWFR010000000
VERSION     DAGWFR010000421.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 811)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 811)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..811
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.429"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..442
                     /gene="fhuD"
                     /locus_tag="MOX77_004861"
     CDS             <1..442
                     /gene="fhuD"
                     /locus_tag="MOX77_004861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Fe(3+)-hydroxamate ABC transporter
                     substrate-binding protein FhuD"
                     /protein_id="HCA3360218.1"
                     /translation="AEKHLAQYDRFIASQKPRFIRRGGRPLLMTTLIDPRHMLVLGPN
                     CLFQEVLDEYGIVNAWQGETNFWGSTAVSIDRLAMYKEADVICFDHGNSTDMNALMAT
                     PLWQAMSFVRAGRFHRVPAVWFYGATLSTMHFVRILNNVLGGKA"
     gene            457..>811
                     /locus_tag="MOX77_004862"
     CDS             457..>811
                     /locus_tag="MOX77_004862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016504759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HCA3360219.1"
                     /translation="MPDGGAKNALTDLRFGRFVGRIRRSRHPALLLLALLVAACWLTW
                     VNFSVALPRSQWQQAIWSPDIDIIEQMIFHYSQLPRLAISLLVGAGLGLVGVLFQQVL
                     RNPLAEPTTLGVATGA"
BASE COUNT          158 a          218 c          255 g          180 t
ORIGIN      
        1 ggcagaaaaa catctggcgc aatacgatcg cttcatcgcc agccagaagc cacgttttat
       61 ccgccgcggg ggacgtccgt tactgatgac gacgcttatc gatccgcggc atatgctggt
      121 gctcggcccg aattgcctgt tccaggaggt gctggacgag tatggcatcg tcaatgcctg
      181 gcagggtgaa accaactttt ggggcagtac ggcggtcagc atcgatcggc tggcgatgta
      241 taaagaagcg gatgtgatct gcttcgatca cgggaatagc accgatatga acgcgctgat
      301 ggcaacgccg ctgtggcagg ccatgtcgtt tgtccgcgcc gggcgttttc accgggtgcc
      361 cgccgtttgg ttctatggcg cgaccctctc cacgatgcat tttgtccgca tcctgaataa
      421 cgtgttggga ggcaaagcgt gagcagaaaa cgtgaaatac cggatggcgg tgcgaaaaac
      481 gccttaaccg acctacggtt cgggcgcttt gtaggccgga taaggcgaag ccgccatccg
      541 gcgttgctgt tattggcgct gttggttgcc gcctgctggc tgacatgggt taacttctcc
      601 gttgcgctac cgcgcagtca gtggcaacag gctatctggt caccagatat cgacatcatt
      661 gagcagatga tttttcatta cagccagctg ccaagactgg cgatttcgct gctggtgggc
      721 gcggggcttg ggctggtagg cgtcctgttc cagcaagtat tacgtaaccc gctggcggaa
      781 ccgaccacgc tgggcgtggc gaccggcgcg c
//
LOCUS       DAGWFR010000422          809 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.430, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000422 DAGWFR010000000
VERSION     DAGWFR010000422.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 809)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 809)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..809
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.430"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            1..543
                     /locus_tag="MOX77_004863"
                     /pseudo
     CDS             1..543
                     /locus_tag="MOX77_004863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461634.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
     gene            547..809
                     /locus_tag="MOX77_004864"
                     /pseudo
     CDS             547..809
                     /locus_tag="MOX77_004864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461634.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
BASE COUNT          210 a          213 c          234 g          152 t
ORIGIN      
        1 caggtgatcc ctgaaaacga gggcggttgg tggatacgtg aagtgggcct gtttgatgag
       61 tccggggcat tgattgccgt gggaaactgc ccggaaagct ataagccgca actggctgaa
      121 ggcagcgggc gtacccagac cgtgcgcatg gtgctgatta ccagcagcac ggacaatatc
      181 accctgaaaa tcgaccctgc cgtagtgctg gcaacccgca agtatgtgga tgataaggta
      241 ctggagctga aggtgtacgt ggatgacctg atggcaaaac atcttgccgc accggacccg
      301 cattcacagt atgcacagaa agaaagtcct acgtttaccg ggacacccaa agcgccaacg
      361 ccagcggcgg ggaataacac cacgcaggtt gcgaccaccg cgtttgttca ggctgcactg
      421 acggctatta ttaatggtgc gccagccacg ctggacacgc tgaaagaaat agccgtagcc
      481 attaacaatg atccgaaatt cagtaccacc attaataatg cgctggcact gaaagcgccg
      541 ctgttgagtc cggcactcac cggaacgcca acagccccca cggcggcgca gtcggtcaac
      601 aatacacaga ttgccactac ggcttttgtg aaatcggcga ttgcggcaat ggtgggttct
      661 gcacctgcgg cactggatac actgaacgaa ctggcggcgg cgctggggaa tgacccgaac
      721 tttgccacga caatgcttaa tgcactggca ggtaaacaac cgctggacaa tacgctgact
      781 aatttgagtg gaaaggatgt agcgggtct
//
LOCUS       DAGWFR010000423          795 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.431, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000423 DAGWFR010000000
VERSION     DAGWFR010000423.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 795)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 795)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..795
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.431"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..272
                     /locus_tag="MOX77_004865"
     CDS             <1..272
                     /locus_tag="MOX77_004865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF480 domain-containing protein"
                     /protein_id="HCA3360220.1"
                     /translation="FSDMAEVESTLERLASREDGPYVVRLAREPGKRESRYMHLFCGD
                     VDELSLQTSAPESASGDLQSRVEALESEVAELKQRLDSLLAHLGE"
     gene            274..>795
                     /locus_tag="MOX77_004866"
     CDS             274..>795
                     /locus_tag="MOX77_004866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HCA3360221.1"
                     /translation="MRTLRIGIVVLGGIAQKAWLPVLTNTAGWTLQGAWSPSRDKALR
                     ICESWRIPYVDSLANLASGCDAVFVHSSTASHYAVVSELLNAGVHVCVDKPLAENLRD
                     AERLVALAAQKKLTLMVGFNRRFAPLYRELKTRLGTAASLRMDKHRTDSIGPHDLRFT
                     LLDDYLHVVDTVLW"
BASE COUNT          160 a          202 c          245 g          188 t
ORIGIN      
        1 aattcagcga tatggcggaa gttgaatcca cgctggaacg gcttgccagt cgtgaggacg
       61 gcccgtatgt cgtccgtctg gcgcgtgaac cgggtaagcg cgaaagccgc tatatgcacc
      121 ttttttgcgg cgacgtcgat gaactgtctc tccagacgtc tgcgccggaa agtgcgtcgg
      181 gcgatcttca gtcgcgcgtc gaagcgctgg aaagcgaagt ggcggagtta aagcagcggc
      241 tggattcttt gttagctcac ctgggagagt aatgtgagaa cattacggat tggcattgtc
      301 gtgttaggtg gtattgcgca gaaggcctgg ctgccggtat taaccaacac cgccggatgg
      361 acgttacagg gcgcctggtc tccttcgcgg gataaagcct tacgtatttg cgaaagctgg
      421 cgcataccgt atgtggattc gctggcgaat ttagcgtccg gctgcgatgc ggtcttcgtc
      481 cactccagta ccgcaagcca ttatgccgtg gtcagcgaac ttctcaacgc tggcgtccat
      541 gtctgcgtgg ataaaccgct ggcggaaaat ctacgtgatg ccgaacggct ggtggcgctg
      601 gcggcgcaaa aaaaattgac gctgatggtt ggctttaatc gccgtttcgc gccgctgtac
      661 cgcgaactga agacgcgcct cggcactgcg gcgtcactgc gtatggataa acatcgtacc
      721 gatagcatcg ggccgcatga cttacgtttt actttgctcg atgactatct gcatgtcgtg
      781 gataccgttc tgtgg
//
LOCUS       DAGWFR010000424          794 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.432, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000424 DAGWFR010000000
VERSION     DAGWFR010000424.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 794)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 794)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..794
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.432"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..121
                     /locus_tag="MOX77_004867"
     CDS             <1..121
                     /locus_tag="MOX77_004867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014226833.1"
                     /note="in Escherichia coli RsmE methylates the N3 position
                     of the U1498 base in 16S rRNA; cells lacking this function
                     can grow, but are outcompeted by wild-type; SAM-dependent
                     m(3)U1498 methyltransferase; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HCA3360222.1"
                     /translation="AMTARYQFTDILLGPRVLRTETTALTAITALQVRFGDLG"
     gene            141..>794
                     /gene="gshB"
                     /locus_tag="MOX77_004868"
     CDS             141..>794
                     /gene="gshB"
                     /locus_tag="MOX77_004868"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione synthase"
                     /protein_id="HCA3360223.1"
                     /translation="MIKLGIVMDPIAHINIKKDTSFAMLLEAQRRGYELHYMEMADLY
                     LINGEARACTRTLSVEQNYDKWYEFGSEQEIKLADLDVILMRKDPPFDTEFIYATYIL
                     ERAEEEGTLIVNKPQSLRDCNEKLYTAWFADLTPETLVTRNKAQLKAFWEKHGDIIMK
                     PLDGMGGASIFRVKEGDPNIGVIAETLTELGNRYCMAQNYLPAIKDGDKRVLVVDGEP
                     "
BASE COUNT          208 a          202 c          214 g          170 t
ORIGIN      
        1 cgcgatgacc gcgcgctatc agtttactga tattctgtta ggacctcgcg ttctgcgtac
       61 tgagacaacc gcgctcaccg ccattaccgc gctacaggtg cgttttggcg acttaggatg
      121 aagcgttaac ggagaaaata atgatcaagc tcggcatcgt gatggacccc atcgcacaca
      181 tcaacatcaa gaaagacacc agtttcgcta tgctgctgga agcccaacgt cgtggttatg
      241 aacttcatta tatggagatg gccgaccttt atctgattaa cggcgaagcc cgcgcctgca
      301 cgcgaacgtt gagcgtggag caaaattacg ataaatggta cgagttcggc agcgagcagg
      361 agattaaact cgccgatctg gacgtcattt tgatgcgcaa agatccgccg tttgataccg
      421 agtttattta tgcaacctat attctggaac gcgctgaaga ggaagggacg cttatcgtca
      481 acaaaccgca aagcctgcgc gactgtaatg aaaaactgta tactgcctgg tttgccgacc
      541 tgacgccgga aacgctggta acgcgcaata aagcgcagct caaagcgttt tgggaaaagc
      601 acggcgatat cattatgaaa ccgctggacg gtatgggcgg cgcgtccatt ttccgcgtta
      661 aggaaggcga tcctaacata ggcgttatcg ccgaaacgct gaccgagcta ggcaaccgct
      721 actgcatggc gcagaactat ctgcccgcga tcaaagatgg cgataagcgc gtactggtcg
      781 tcgacggcga gccg
//
LOCUS       DAGWFR010000425          762 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.433, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000425 DAGWFR010000000
VERSION     DAGWFR010000425.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 762)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 762)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..762
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.433"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..>762)
                     /locus_tag="MOX77_004869"
     CDS             complement(<1..>762)
                     /locus_tag="MOX77_004869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3360224.1"
                     /translation="IFQVGGNFGSSLGPLLAAVIIAPYGKGNVAWFVLATLLAIVVLA
                     QISRWYAAQHRIAKGKPKAIIANPLPRNKVVLAVSVLLLLIFSKYFYMASISSYYTFY
                     LMQKFGLSIQNAQLHLFAFLFAVAAGTVIGGPVGDKIGRKYVIWGSILGVAPFTLVLP
                     YATLYWTGILTVIIGFILASAFSAILVYAQELLPGRIGMVSGLFFGFAFGMGGLGAAV
                     LGLIADHTSIYLVYKICAFLPLLGILTIFLPDNRH"
BASE COUNT          212 a          212 c          194 g          144 t
ORIGIN      
        1 tatgtcgatt atcaggtaag aatatggtca gtatccccag aagcggcaga aaagcacaga
       61 ttttataaac taaatagata ctggtatggt ctgcaatcag ccccagcacc gctgcgccca
      121 ggcctcccat cccgaaggca aacccgaaaa acaggccgga aaccatgccg atgcgtcctg
      181 gcagcagctc ttgggcatac accagaatgg cggaaaacgc cgacgcgaga ataaagccga
      241 taatcaccgt taaaatcccc gtccagtaca gcgtggcgta gggtaaaaca agggtaaacg
      301 gcgcgacgcc gagaatagag ccccaaatca catattttct gccgatttta tcgcccaccg
      361 gcccgccgat aaccgtcccg gcagccaccg caaacaggaa ggcaaacaga tggagctgcg
      421 cgttttgtat tgataatccg aatttttgca tcagataaaa ggtgtagtag ctactgatgc
      481 tcgccatata gaaatatttc gagaaaatga gtagcaataa cacgctgacc gccagcacga
      541 ctttattgcg cggcagcggg ttagcgatta tcgcttttgg cttgcctttc gctatccggt
      601 gctgggctgc ataccagcgg ctgatctgcg ccagcaccac gatcgccagc agcgtggcca
      661 gcacaaacca ggcgacattc cctttgccat agggcgcgat aatcacggcg gccagcagcg
      721 ggcccaatga actgccgaag ttaccgccga cctggaagat ag
//
LOCUS       DAGWFR010000426          760 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.434, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000426 DAGWFR010000000
VERSION     DAGWFR010000426.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 760)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 760)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..760
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.434"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..657
                     /locus_tag="MOX77_004870"
     CDS             <1..657
                     /locus_tag="MOX77_004870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HCA3360225.1"
                     /translation="LPRAAQSIVKGASFDNNIICADEKVLIVVDSVADELMRLMEGQH
                     AVKLTAAQAEQLQPVLLKNIDERGKGTVSRDWVGRDAGKIAAAIGLNVPDQTRLLFVE
                     TPANHPFAVTEMMMPVLPVVRVANVEDAIALAVQLEGGCHHTAAMHSRNIDNMNQMAN
                     AIDTSIFVKNGPCIAGLGLGGEGWTTMTITTPTGEGVTSARTFVRLRRCVLVDAFRIV
                     "
     gene            668..>760
                     /locus_tag="MOX77_004871"
     CDS             668..>760
                     /locus_tag="MOX77_004871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization protein EutJ"
                     /protein_id="HCA3360226.1"
                     /translation="MAHDEQLWLTPRLQKAAALCNQTPAASDTPL"
BASE COUNT          171 a          222 c          230 g          137 t
ORIGIN      
        1 ctgccgcgcg ccgcacaatc catcgtcaaa ggcgcgtcgt ttgataacaa catcatctgt
       61 gccgacgaaa aagtgctgat tgtggtggat agcgtcgccg acgagctgat gcgtctgatg
      121 gaaggtcagc acgcggtgaa actgactgcc gctcaggccg aacagctcca gccggtgctg
      181 ctgaagaata ttgatgagcg cggcaaaggc accgtcagcc gtgactgggt cggtcgtgac
      241 gcgggcaaaa tcgccgcagc cattggcctg aacgtcccgg atcaaacgcg cctgctattt
      301 gtggaaacgc cagctaacca tccgtttgcc gtcactgaaa tgatgatgcc ggtactgccg
      361 gtggtgcggg tcgccaacgt cgaagatgcc atcgccctgg cggtacaact tgaaggcggt
      421 tgccaccata cggcggcgat gcactcgcgc aatatcgaca acatgaacca gatggcgaac
      481 gccatcgaca ccagcatttt cgtcaaaaac gggccgtgca ttgccgggct tggattgggc
      541 ggagaaggct ggaccaccat gactatcact acgccaaccg gcgaaggggt gaccagcgcg
      601 cgtacctttg tgcggctgcg tcgatgcgtg ctggtggatg cgtttcgcat tgtataaggg
      661 atgactcatg gcgcacgacg aacaactctg gctcacccca agactgcaaa aagcggcggc
      721 cctgtgtaac cagacgcccg ccgccagcga cacaccgctg
//
LOCUS       DAGWFR010000427          758 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.435, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000427 DAGWFR010000000
VERSION     DAGWFR010000427.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 758)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 758)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..758
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.435"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..305
                     /locus_tag="MOX77_004872"
     CDS             <1..305
                     /locus_tag="MOX77_004872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462990.1"
                     /note="similar to transaldolase from Escherichia coli;
                     many organisms have multiple copies; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="fructose-6-phosphate aldolase"
                     /protein_id="HCA3360227.1"
                     /translation="ALAGAKYVAPYVNRVDAQGGDGIRMVLELQTLLEHHAPDSMVLA
                     ASFKTPRQALDCLLAGCQAITLPLDVAQQMLNTPAVESAIEKFEQDWKNAFGNLNL"
     gene            317..>758
                     /locus_tag="MOX77_004873"
     CDS             317..>758
                     /locus_tag="MOX77_004873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HCA3360228.1"
                     /translation="MDRIIQSPGKYIQGANVIARLGDYLKPMANNWLVVGDKFVLGFA
                     EETLRKSLTDAGLSVEIAPFGGECSQNEIDRLRAVAEKSQCGAVLGIGGGKTLDTAKA
                     LAHFMNVPVAIAPTIASTDAPCSALSVIYTDAGEFDRYLLLPHNP"
BASE COUNT          176 a          195 c          221 g          166 t
ORIGIN      
        1 cggcgctggc gggcgcaaaa tatgtcgctc cctacgtcaa ccgcgttgat gcgcagggcg
       61 gcgatggcat tcgtatggtt ctggagctgc aaacgctact ggaacatcac gcgcccgaca
      121 gcatggtact ggcggccagc tttaaaacgc cgcggcaggc gctggattgc ttactggcag
      181 gttgccaggc gattaccctt cctttagatg tagcgcaaca aatgctcaat acgcctgcgg
      241 tagagtcagc aatagagaag tttgagcaag actggaaaaa cgcttttggt aatctgaacc
      301 tgtaggagag aaatgtatgg atcgcattat tcagtcacca ggtaagtata ttcagggtgc
      361 aaacgtcatc gcgcgtcttg gcgattattt aaaaccaatg gcgaacaact ggctggttgt
      421 gggcgataaa ttcgtgctgg gatttgccga agagacgctg cgcaaaagcc tgacggatgc
      481 cggtttgtca gtagaaatcg ccccgtttgg cggcgaatgt tcgcaaaatg agatcgacag
      541 gctgcgcgcc gtcgccgaaa aaagtcagtg tggcgccgta ctgggtatcg gcggcggtaa
      601 aacgctggat accgccaaag cgctggcgca ctttatgaac gtcccggtcg ctatcgcgcc
      661 gaccatcgcc tctaccgacg caccgtgcag cgcactctcg gttatttata ccgatgccgg
      721 tgagtttgac cgttatctgc tgctgccgca taacccga
//
LOCUS       DAGWFR010000428          752 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.436, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000428 DAGWFR010000000
VERSION     DAGWFR010000428.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 752)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 752)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..752
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.436"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            1..752
                     /locus_tag="MOX77_004874"
                     /pseudo
     CDS             1..752
                     /locus_tag="MOX77_004874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462517.1"
                     /note="internal stop; incomplete; missing N-terminus and
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
BASE COUNT          173 a          203 c          243 g          133 t
ORIGIN      
        1 ctgctgaagg tcaatcgcta ctggctgtta attcagcagg gcgacgcggc cttaaaagcg
       61 aataatctgg ctcaggcgga gcgtttctat cagcaggcgc gagcagtgga taacaccgac
      121 agctacgcgg tgctggggct gggggatgtg gcgatggcgc gcaaagataa tgccgccgcc
      181 gaacgttatt atcagcagac gctgcgtatg gacagcggta ataccaatgc tgtacgcggg
      241 ctggcgaatc tttatcgtta gcagtcgccg caaaaagccg ccgcgtttat cgcttctctt
      301 tccgccagcc agcggcgcag tatcgacgat atcgaacgca gtctggaaaa tgaccgtctg
      361 gcgcagcagg cggaaacgct ggaaagcgag ggcaaatggg cgcaggccgc agaactgcac
      421 cgccgccggc tggcattaga tccggggagc gtgtgggtaa cgtatcgact gtcacgcgat
      481 ctgtggcagg ccggacagca cgcccaggcc gatgcgcaaa tgcgctctct ggcgcagcag
      541 aagccaaacg atccggaaca ggtctatgct tatgggcttt atctttccgg cagcgatcgg
      601 ggccgggcgg cgctggcgca tctcaatacc ctgccgacca gccagtggaa cagcaatatt
      661 caggaactgg cgggccgatt gtaaagtaac caggtgctgg aaagcgctaa ccgcttgcgc
      721 gatagcggca aagaacgcga agcggaagcg tt
//
LOCUS       DAGWFR010000429          736 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.437, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000429 DAGWFR010000000
VERSION     DAGWFR010000429.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 736)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 736)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..736
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.437"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..285
                     /locus_tag="MOX77_004875"
     CDS             <1..285
                     /locus_tag="MOX77_004875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016504759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HCA3360229.1"
                     /translation="IALLALAACLTATATMTIGPLSFVGLMAPHIARMLGFRRTMPHM
                     VISALAGGVLLVFADWCGRMALFPYQIPAGLLSSFIGAPYFIYLLRKQSR"
     gene            complement(376..>736)
                     /locus_tag="MOX77_004876"
     CDS             complement(376..>736)
                     /locus_tag="MOX77_004876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020233394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HCA3360230.1"
                     /translation="GFACLNEVAQPGIHETLDELTTRLAEGLLEAAEEANIPLVVNHV
                     GGMFGIFFTDAESVTCYQDVMACDVERFKRFFHLMLEEGVYLAPSAFEAGFMSVAHSM
                     DDINNTIDAARRVFAKL"
BASE COUNT          150 a          206 c          207 g          173 t
ORIGIN      
        1 atcgcgctgc tggcgttggc ggcttgtttg acggcaaccg cgacgatgac cattgggccg
       61 ctgagtttcg ttggattgat ggcgccgcat attgcgcgga tgctcggttt tcgccggacg
      121 atgccgcata tggtcatctc agcgctggca gggggcgttt tattggtctt tgccgactgg
      181 tgcggcagga tggcgctatt tccgtatcag atcccggcgg gactgctttc aagctttatt
      241 ggcgcgccgt actttatcta tttgctacgt aaacagagcc gctgagtttg ccggatggcg
      301 gcataaatgc cttatccggc ctgcggtgta gaatgtaggc cgggtaagcg taagcgtcac
      361 ccggcaattc atcctttaca atttcgcaaa cacccgacgc gcggcgtcaa tagtattatt
      421 aatgtcgtcc atgctgtgtg cgaccgacat aaaacccgcc tcaaacgccg atggcgccag
      481 atacacgcct tcctccagca tcaggtggaa gaaacgctta aagcgttcca cgtcgcacgc
      541 catcacgtcc tgatagcaag ttacgctctc agcgtcggtg aagaaaatcc cgaacatgcc
      601 gccgacatgg ttaaccacca gcggaatatt cgcttcttcg gcagcttcca gcaaaccttc
      661 cgccaggcgg gtggtgagct catccagcgt ttcatgaatg ccgggctggg cgacttcatt
      721 caggcaggcg aaaccg
//
LOCUS       DAGWFR010000430          726 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.438, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000430 DAGWFR010000000
VERSION     DAGWFR010000430.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 726)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 726)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..726
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.438"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            35..726
                     /locus_tag="MOX77_004877"
                     /pseudo
     CDS             35..726
                     /locus_tag="MOX77_004877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612230.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
BASE COUNT          166 a          187 c          206 g          167 t
ORIGIN      
        1 atttagtgta tgatggtgtt tttgaggtgc tccagtggct tctgtttcta tcagctgtcc
       61 ctcctgttca gctactgacg gggtggtgcg taacggcaaa agcaccgccg gacatcagcg
      121 ctatctctgc tctcactgcc gtaaaacatg gcaactgcag ttcacttaca ccgcttctca
      181 acccggtacg caccagaaaa tcattgatat ggccatgaat ggcgttggat gccgggcaac
      241 cgcccgcatt atgggcgttg gcctcaacac gattttccgc catttaaaaa actcaggccg
      301 cagtcggtaa cctcgcgcat acagccgggc agtgacgtca tcgtctgcgc ggaaatggac
      361 gaacagtggg gatacgtcgg ggctaaatcg cgccagcgct ggctgtttta cgcgtatgac
      421 aggctccgga agacggttgt tgcgcacgta ttcggtgaac gcactatggc gacgctgggg
      481 cgtcttatga gcctgctgtc accctttgac gtggtgatat ggatgacgga tggctggccg
      541 ctgtatgaat cccgcctgaa gggaaagctg cacgtaatca gcaagcgata tacgcagcga
      601 attgagcggc ataacctgaa tctgaggcag cacctggcac ggctgggacg gaagtcgctg
      661 tcgttctcaa aatcggtgga gctgcatgac aaagtcatcg ggcattatct gaacataaaa
      721 cactat
//
LOCUS       DAGWFR010000431          721 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.439, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000431 DAGWFR010000000
VERSION     DAGWFR010000431.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 721)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 721)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.439"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..305
                     /locus_tag="MOX77_004878"
     CDS             <1..305
                     /locus_tag="MOX77_004878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="GPW/gp25 family protein"
                     /protein_id="HCA3360231.1"
                     /translation="RYPQAAASVLNYGLPPLAGSFMYEHKWDDISEAIRRAIIRFEPR
                     LNAATLRVTPLLDEARQGSYNTLQFEIRGQILTQPYPTEFLVRSALDMELSRITFF"
     gene            321..>721
                     /locus_tag="MOX77_004879"
     CDS             321..>721
                     /locus_tag="MOX77_004879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system baseplate subunit TssF"
                     /protein_id="HCA3360232.1"
                     /translation="MDPRLLEYYNRELSYLRETGAEFATLHPKIAARLGMQGTDIADP
                     YVERMIEAFSFLSARTQLKIDAEFPRFTQRLLEVVNPNYVTPTPSMAVVKLYPDTQEG
                     DLAKGVTVPRDTAFVSPIPEGENTACQFRSS"
BASE COUNT          158 a          221 c          199 g          143 t
ORIGIN      
        1 ggcgctatcc gcaggcggcg gcgtcagtgc tcaactatgg cctgccgccg ctggcgggca
       61 gctttatgta tgagcacaag tgggacgata tcagcgaggc gatccggcgc gccattatcc
      121 gtttcgaacc ccggctgaac gccgccacac tcagggtcac gcccttgctc gatgaagccc
      181 ggcagggtag ctataacacg ctacagtttg aaattcgcgg acaaattctg acgcagccgt
      241 atcccacgga gtttctggta cgcagcgcgc tggatatgga gctgagccgc attacgttct
      301 tttaatacag ggcattattc atggatccac ggctactgga gtattacaac cgcgaactga
      361 gttacctgcg ggagaccggt gctgagttcg ccaccctcca tcccaaaatt gccgcccgac
      421 tggggatgca gggaaccgat attgccgacc cgtatgtgga acgcatgatc gaggcgttca
      481 gctttctgag cgcccgcact cagctaaaaa ttgacgccga atttccccgc ttcacacagc
      541 ggttactgga agtcgtcaac cccaattacg tcacccccac gccatcgatg gcagtggtaa
      601 agctgtatcc cgatacgcag gaaggcgacc tggcgaaagg ggtcaccgtg ccgcgcgata
      661 ccgcgttcgt ttcccccatc ccggaaggcg aaaataccgc ctgccagttt cgcagcagcc
      721 a
//
LOCUS       DAGWFR010000432          711 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.440, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000432 DAGWFR010000000
VERSION     DAGWFR010000432.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 711)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 711)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..711
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.440"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..346)
                     /locus_tag="MOX77_004880"
     CDS             complement(<1..346)
                     /locus_tag="MOX77_004880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HCA3360233.1"
                     /translation="MIEFNHVSKTFGDQQAVSDLNLHFSEGSFSVLIGTSGSGKSTTL
                     KMINRLVEHDSGTIRFAGEEIRSLPVLELRRRMGYAIQSIGLFPHWTVAQNIATVPQL
                     QKWSRARINDRID"
     gene            complement(339..>711)
                     /locus_tag="MOX77_004881"
     CDS             complement(339..>711)
                     /locus_tag="MOX77_004881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCA3360234.1"
                     /translation="VLYALLPLVRGVVAGLNQVPRDVLESARAMGMSSGQRFRHVQLP
                     LALPVFLRSLRVVMVQTVGMAVAAALIGAGGFGALVFQGLLSSAIDLVLLGVIPVIAL
                     AVVIDALFDLWIAFLKGATDD"
BASE COUNT          176 a          225 c          173 g          137 t
ORIGIN      
        1 catcaatacg atcgttaatc cgcgcacgcg accacttttg tagttgcggt acggtggcga
       61 tattttgcgc caccgtccag tggggaaaaa ggccgataga ctgaatggca tagcccatgc
      121 gacggcgcag ttcaagcacc ggcaggctgc ggatctcttc accggcaaaa cggatcgttc
      181 cgctatcatg ctctaccagc cggttaatca tcttcagagt ggtcgatttt cccgaaccgg
      241 aggtgccaat taacaccgaa aagctgcctt cgctaaagtg caaattgagg tcgctaacag
      301 cctgttgatc gccgaaggtt ttactgacat ggttaaattc aatcatcggt tgctcccttc
      361 aaaaacgcga tccataaatc aaacagcgcg tcgatcacta ccgccagcgc aatcaccgga
      421 atgacgccca acaggactaa atcaatggcg ctgctcaata gcccctgaaa caccagcgcg
      481 ccgaaacctc ccgcgccaat cagcgcggcg gcgacggcca ttcccactgt ctggaccatt
      541 actacccgca ggctacgtaa aaagaccggc agcgccagcg gcagttgcac atgcctgaag
      601 cgctggccgc tactcattcc cattgctctt gcgctctcca gcacatcgcg tggcacctga
      661 ttgagcccgg cgaccacgcc gcgcaccagc ggcaataacg catagagcac c
//
LOCUS       DAGWFR010000433          703 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.441, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000433 DAGWFR010000000
VERSION     DAGWFR010000433.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 703)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 703)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..703
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.441"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..>703
                     /locus_tag="MOX77_004882"
     CDS             <1..>703
                     /locus_tag="MOX77_004882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_447555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HCA3360235.1"
                     /translation="MFTGSTEVATLLQRNIATRLDAQGRPIPLIAETGGMNAMIVDSS
                     ALTEQVVVDVLASAFDSAGQRCSALRVLCLQDDIAEHTLKMLRGAMAECRMGNPGRLT
                     TDIGPVIDSEAKANIERHIQTMRAKGRPVFQAARENSDDAQEWQTGTFVMPTLIELEN
                     FAELEKEVFGPVLHVVRYNRNQLAELIEQINASGYGLTLGVHTRIDETIAQVTGSAHV
                     GNLYVNRNMVGAVVGV"
BASE COUNT          146 a          198 c          213 g          146 t
ORIGIN      
        1 atgtttaccg gttccacgga ggtcgcgacg ttgttgcagc gcaacatcgc cacgcgtctt
       61 gacgcccagg ggcgccctat tccgttgatt gcggaaaccg gcggtatgaa cgctatgatt
      121 gtcgactctt ccgcgctcac cgagcaggtg gtcgtggatg tgctggcttc cgccttcgac
      181 agcgccggac aacgctgttc cgcgctccgc gtgctgtgtt tgcaggacga tatcgccgaa
      241 catacgctga aaatgttacg cggcgcgatg gcggagtgtc ggatggggaa tccaggccgt
      301 ctgacgaccg atatcgggcc ggtgatcgat agcgaggcca aagccaacat tgaacgtcat
      361 atccagacga tgcgcgccaa aggccgcccg gttttccagg ccgcgcgtga aaacagcgat
      421 gacgcgcagg aatggcagac cggtacgttt gttatgccca cgcttattga gctggaaaac
      481 ttcgcagaac tggaaaaaga ggtcttcggg cccgtgctgc acgtcgtgcg ttataaccgt
      541 aaccaactgg cggagcttat cgaacagatt aacgcttccg gctacgggct aacgctgggc
      601 gtacataccc gtattgatga aaccattgcg caagtcaccg gttccgccca tgtcggcaac
      661 ctgtacgtta accgtaatat ggtgggcgcg gtcgtcggcg tcc
//
LOCUS       DAGWFR010000434          667 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.442, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000434 DAGWFR010000000
VERSION     DAGWFR010000434.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 667)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 667)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..667
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.442"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..275
                     /locus_tag="MOX77_004883"
     rRNA            <1..275
                     /locus_tag="MOX77_004883"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
     gene            345..421
                     /locus_tag="MOX77_004884"
     tRNA            345..421
                     /locus_tag="MOX77_004884"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:379..381,aa:Ile,seq:gat)
     gene            533..608
                     /locus_tag="MOX77_004885"
     tRNA            533..608
                     /locus_tag="MOX77_004885"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:566..568,aa:Ala,seq:tgc)
BASE COUNT          170 a          156 c          180 g          161 t
ORIGIN      
        1 gagagcaagc ggacctcata aagtgcgtcg tagtccggat tggagtctgc aactcgactc
       61 catgaagtcg gaatcgctag taatcgtgga tcagaatgcc acggtgaata cgttcccggg
      121 ccttgtacac accgcccgtc acaccatggg agtgggttgc aaaagaagta ggtagcttaa
      181 ccttcgggag ggcgcttacc actttgtgat tcatgactgg ggtgaagtcg taacaaggta
      241 accgtagggg aacctgcggt tggatcacct ccttacctta aagaagcgta ctttgcagtg
      301 ctcacacaga ttgtctgatg aaaaacgagc agtaaaacct ctacaggctt gtagctcagg
      361 tggttagagc gcacccctga taagggtgag gtcggtggtt caagtccact caggcctacc
      421 agattttccc tgaatactgc gttgtgaaat aactcacata ctgatgtatg cttcgttatt
      481 ccacgccttg tctcaggaaa aattatcggt aaagaggttc tgactacacg atggggctat
      541 agctcagctg ggagagcgcc tgctttgcac gcaggaggtc tgcggttcga tcccgcatag
      601 ctccaccatc tcgtgagtgt ttacgaaaaa atacttcaga gtgtacctga aagggttcac
      661 tgcgaag
//
LOCUS       DAGWFR010000435          656 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.443, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000435 DAGWFR010000000
VERSION     DAGWFR010000435.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 656)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 656)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..656
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.443"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..575)
                     /locus_tag="MOX77_004886"
     CDS             complement(<1..575)
                     /locus_tag="MOX77_004886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCA3360236.1"
                     /translation="MLSFLKAPANAPLITDKHEVDARYRYWRRYILITIWLGYALFYF
                     TRKSFNAAAPEILASGILTRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGL
                     IATGVVNILFGFSTSLWAFALLWALNAFFQGFGSPVCARLLTAWYSRTERGGWWALWN
                     TAHNVGGALIPLVMAAVALHYGWRVGMMVAG"
BASE COUNT          171 a          196 c          187 g          102 t
ORIGIN      
        1 aatccggcca ccatcatccc gacgcgccag ccataatgca gggcgacagc ggccataacg
       61 agagggatca gcgccccgcc gacattatgc gcggtgttcc ataacgccca ccagccgccg
      121 cgctcggtac gcgagtacca ggcagtcagc aaacgggcgc aaaccggcga tccaaacccc
      181 tggaaaaagg cgttcagcgc ccatagcagc gcaaaggccc acagcgaggt cgagaagccg
      241 aacagaatat tcactacgcc ggtcgcaatc agcccgatgc ccataaaata gcgagcgtta
      301 gagcgatcgc taacgatgcc ggagacaaat ttcgacaccc cgtaggtgat gtaaaacagc
      361 gtcgccagca ggccgatatc gctgcgggtc agaataccgc tggcaaggat ttccggcgcg
      421 gcggcgttaa agcttttacg ggtgaaatag aacagcgcgt aacccaacca aatggtgatc
      481 aggatatacc gccgccagta gcgatagcgg gcgtcaacct cgtgcttatc ggtgatgagc
      541 ggcgcgttgg ccggggcttt taaaaacgaa agcattatcc ttccttaaac gtaacgctgg
      601 ggcaacgaga cgctcacccg cgtaccgtgg gtacaagaga tggttagcgt cccgcc
//
LOCUS       DAGWFR010000436          641 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.444, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000436 DAGWFR010000000
VERSION     DAGWFR010000436.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 641)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 641)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..641
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.444"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..187)
                     /gene="kdpC"
                     /locus_tag="MOX77_004887"
     CDS             complement(<1..187)
                     /gene="kdpC"
                     /locus_tag="MOX77_004887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpC"
                     /protein_id="HCA3360237.1"
                     /translation="MIGLRPAFSTMLFLLLLTGGVYPLLTTALGQWWFPWQANGSLIH
                     KDNLIRGSALIGQSFTAA"
     gene            complement(196..>641)
                     /locus_tag="MOX77_004888"
     CDS             complement(196..>641)
                     /locus_tag="MOX77_004888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATPase"
                     /protein_id="HCA3360238.1"
                     /translation="NSGTQAAKEAGNMVDLDSNPTKLIEVVHIGKQMLMTRGSLTTFS
                     IANDVAKYFAIIPAAFAATYPQLNALNVMGLHSPNSAILSAVIFNALIIIFLIPLALK
                     GVSYKPLSASAMLRRNLWIYGLGGLVVPFIGIKVIDVLLTLLDLA"
BASE COUNT          175 a          178 c          163 g          125 t
ORIGIN      
        1 ccgcggcggt aaacgattgt ccgataagcg ctgagccgcg tatcagattg tctttatgaa
       61 tcagcgagcc attagcctgc cagggaaacc accactgccc cagcgccgtg gtcagaagcg
      121 gatacacgcc gccggtcaat aacagcagaa ataacattgt cgaaaaagca ggacgtaaac
      181 cgatcatcat acacctcacg ccagatccag cagggtcagc agcacatcaa tcactttgat
      241 gccaataaac ggcaccacca gaccacccag accatagatc cataaattac ggcgcagcat
      301 ggccgatgcg gaaagcggct tataactcac gccttttaat gccagcggga tcagaaatat
      361 gataatcagg gcgttaaaga tcaccgcgct cagaatggcg gagttcggcg aatgcagccc
      421 catcacgttg agcgcgttta gctgcggata ggtagcggca aacgcggcgg gaataatggc
      481 gaaatatttc gctacatcat tcgcgatact gaaggtggtg agcgagccgc gcgtcatcag
      541 catctgctta ccgatatgca ccacttcaat caacttggtc gggttagagt ccagatccac
      601 catattaccg gcttctttcg ccgcctgggt gccggagttc a
//
LOCUS       DAGWFR010000437          628 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.445, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000437 DAGWFR010000000
VERSION     DAGWFR010000437.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 628)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 628)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.445"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(42..>628)
                     /locus_tag="MOX77_004889"
     CDS             complement(42..>628)
                     /locus_tag="MOX77_004889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="branched-chain amino acid transport system II
                     carrier protein"
                     /protein_id="HCA3360239.1"
                     /translation="LFRLGSDSATLVDQSANGAAILHAYVQHTFGGAGSFLLAALIFI
                     ACLVTAVGLTCACAEFFAQYIPLSYRTLVFILGGFSMVVSNLGLSHLIQISIPVLTAI
                     YPPCIALVVLSFTRSWWHNSTRIIAPAMFISLLFGILDGIKASAFGDMLPAWSQRLPL
                     AEQGLAWLMPTVVMVILAIIWDRAAGRQVTSSAH"
BASE COUNT          172 a          183 c          174 g           99 t
ORIGIN      
        1 cggggcgtta agccccgtgg tgtacacata tgtcagcgat tttagtgagc gctggaggtc
       61 acctgccgac ccgccgcgcg atcccagata atcgccagga tcaccatcac caccgttggc
      121 atcaaccacg ccagtccctg ttccgccagc ggcaaacgct gactccaggc tggcagcata
      181 tcgccaaagg cagatgcttt gatgccgtca aggataccaa aaagcaggct gataaacatg
      241 gccggcgcga tgatacgggt ggaattatgc caccatgagc gggtaaaact taatacaacc
      301 agtgcgatac acggcggata gatagccgtc agcaccggaa tggagatttg aatcagatgg
      361 ctcagtccga gatttgacac caccatagag aagccgccga gaataaagac cagcgtgcgg
      421 taagacagcg gaatatactg cgcgaaaaac tcagcgcagg cgcaggtcag ccccaccgcc
      481 gtcaccagac acgcgataaa gatcagcgcc gccagcagga agcttcccgc gccgccaaag
      541 gtatgctgaa cgtaggcatg aagaatcgcc gcgccgttcg ctgactgatc gaccagcgtc
      601 gcgctgtcag aacctaagcg aaacaagg
//
LOCUS       DAGWFR010000438          626 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.446, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000438 DAGWFR010000000
VERSION     DAGWFR010000438.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 626)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 626)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..626
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.446"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..322
                     /locus_tag="MOX77_004890"
     CDS             <1..322
                     /locus_tag="MOX77_004890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DsbE family thiol:disulfide interchange protein"
                     /protein_id="HCA3360240.1"
                     /translation="CPTCRAEHQYLNRLAAQGIRVVGLNYKDDRAKAVAWLKELGNPY
                     ALSLSDSDGMLGLDLGVYGAPETFLIDGRGIIRYRHAGDLNARVWESELKPLWDRYSR
                     EAAQ"
     gene            319..>626
                     /locus_tag="MOX77_004891"
     CDS             319..>626
                     /locus_tag="MOX77_004891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis protein CcmH"
                     /protein_id="HCA3360241.1"
                     /translation="MRLLPGMVMLMLALVISGSARATTDVMPFKDEAQEQQFRQLTEQ
                     LRCPKCQNNSIADSNAMIATDMRRRVYDLMQEGKSRQEIIDYMVARYGNFVTYDPPLT
                     P"
BASE COUNT          133 a          174 c          217 g          102 t
ORIGIN      
        1 gtgcccgacc tgccgcgccg agcatcagta cctgaaccgg ctggccgcgc agggtatccg
       61 ggtggtgggg ctgaactata aggacgaccg ggcgaaggcg gtggcctggt taaaggaact
      121 gggcaacccg tatgcgctga gtttatcgga cagcgacggg atgctggggc tggacctggg
      181 cgtgtacggc gcgccggaaa ccttcctcat cgacggcagg gggattatcc gctaccgcca
      241 tgcgggcgat ttgaatgccc gggtatggga aagtgaactg aaaccgctgt gggacagata
      301 cagccgggag gcggcgcaat gagactgtta ccgggcatgg tgatgctgat gctggcgctg
      361 gttatctccg ggtcagcgcg ggcgaccacc gacgtgatgc cgtttaaaga tgaagcgcag
      421 gagcagcagt tccgccagct cacggagcag ctgcgctgcc cgaaatgcca gaacaacagc
      481 attgcggact cgaacgcgat gatagccacc gacatgcgcc gcagggtgta tgacctgatg
      541 caggagggga agagccgcca ggaaatcatc gattacatgg tggcgcgcta cggcaacttc
      601 gtcacctacg acccgccgct gacccc
//
LOCUS       DAGWFR010000439          619 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.447, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000439 DAGWFR010000000
VERSION     DAGWFR010000439.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 619)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 619)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.447"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..330
                     /locus_tag="MOX77_004892"
     CDS             <1..330
                     /locus_tag="MOX77_004892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462223.1"
                     /note="ABC transporter maintaining outer membrane lipid
                     asymmetry; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid ABC transporter ATP-binding protein
                     MlaF"
                     /protein_id="HCA3360242.1"
                     /translation="EPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDV
                     PEVLSIADHAWIMADKKIVAHGSAQALQENTDPRVRQFLDGIADGPVPFRYPAGDYHL
                     DLLETGS"
     gene            338..>619
                     /locus_tag="MOX77_004893"
     CDS             338..>619
                     /locus_tag="MOX77_004893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014071945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCA3360243.1"
                     /translation="MLLNALAALGHSGIKTVRTFGRAGLMLFNAIIGKPEFRKHAPLL
                     VRQLYNVGVLSMLIIIVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALS"
BASE COUNT          120 a          155 c          189 g          155 t
ORIGIN      
        1 gaaccggatc tcatcatgtt cgatgagccg tttgttggcc aggacccgat taccatgggc
       61 gttctggtga agctgatttc agaattgaac agcgcgctgg gcgtgacctg cgtggtggtc
      121 tcgcatgatg tgccagaggt gctcagtatt gcggatcacg cctggatcat ggcggacaaa
      181 aaaatcgtcg ctcacggtag cgctcaggcg ttgcaggaga atacggaccc gcgcgtgcgt
      241 cagttccttg acggtattgc cgacgggccg gttccgttcc gctatccggc gggcgactat
      301 caccttgatt tactcgaaac agggagttaa gccactcatg ctgttaaatg cgctggcagc
      361 actcggacac agcgggatca aaaccgtcag gacgttcggg cgcgccgggt taatgttatt
      421 caatgcgatt atcggtaagc cggagtttcg caaacatgcg ccgctgctgg tgcgccagct
      481 ttataatgtg ggcgtcttgt cgatgcttat cattattgtc tccggcgtat tcatcggtat
      541 ggtgctgggg ctgcaaggct atctggttct gaccacttac agcgcggaga ccagtcttgg
      601 catgttagtg gcgctttcg
//
LOCUS       DAGWFR010000440          591 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.448, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000440 DAGWFR010000000
VERSION     DAGWFR010000440.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 591)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 591)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.448"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(55..225)
                     /locus_tag="MOX77_004894"
                     /pseudo
     CDS             complement(55..225)
                     /locus_tag="MOX77_004894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461119.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-dihydrouridine synthase"
     gene            complement(334..>591)
                     /locus_tag="MOX77_004895"
     CDS             complement(334..>591)
                     /locus_tag="MOX77_004895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3360244.1"
                     /translation="AVTLGKALERCDGDAQQAFALYESVRIPRTARIVWSTREMGRLY
                     HAAGVERQVRNLLWKGKSQEAFYRGIEWLYGWKEDNCLEPR"
BASE COUNT          134 a          195 c          153 g          109 t
ORIGIN      
        1 cacgccgtcc ggcacgccgg tgcgtattca gcttctgggc cagcatccgc agtggctggc
       61 gtgaagcaac tccgggcaga tgcgatgaaa cacttttacc ggcagcagct gatccaccac
      121 gcgcacaaat tcggtgatgc agagatcgta atcattcact tcggtcagca gctcgcgcac
      181 taacgcgtcg agcacgcctt ccatcggcgc cagtaaaaca cgcatatcgg tatccacagc
      241 aaaaaaagag gcgctatcat aacgcctctc tgcgatgagc aaaacttttt gccgggtggc
      301 ggcgcaaacg ccacgctacg tcacgtaagg cgctcaacgc ggctcaagac agttatcttc
      361 tttccagccg tacagccatt cgataccgcg ataaaacgcc tcctgcgatt tccctttcca
      421 cagcagatta cgcacctgac gctccacccc ggcggcgtga tagagacgcc ccatctcgcg
      481 ggtagaccag acgatacgcg ccgtgcgggg aatacgcacc gactcataca gcgcaaatgc
      541 ctgctgcgcg tcgccgtcgc agcgttccag cgctttgcct agcgtgacgg c
//
LOCUS       DAGWFR010000441          591 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.449, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000441 DAGWFR010000000
VERSION     DAGWFR010000441.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 591)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 591)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.449"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..357
                     /locus_tag="MOX77_004896"
     CDS             <1..357
                     /locus_tag="MOX77_004896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HCA3360245.1"
                     /translation="YLQTSHPDIYAIGDCAEINGQVLPFLQPIQLSAMYLAKNLLGGN
                     APLKLPAMLVKVKTPELPLHLAGETQRRDLSWQITAESDGMIAKGMSGEGQLRAFVVS
                     EDRMKEAFALLKTLSV"
BASE COUNT          145 a          169 c          165 g          112 t
ORIGIN      
        1 tatctacaga ccagtcaccc ggatatttat gcgatcggcg attgcgcgga aatcaatggt
       61 caggtgctgc ccttcctgca accgatccag ttaagcgcga tgtacctggc gaaaaatctg
      121 ctcggcggca acgcgccgct gaagctaccg gcgatgctgg tcaaagtcaa aacgccggaa
      181 ctgccgctgc atctggcggg agaaactcag cgccgcgatt taagctggca gattaccgca
      241 gaatctgacg gtatgattgc caaaggcatg agtggagaag gccagctacg cgcctttgtg
      301 gtgagtgaag accgcatgaa agaggccttt gcactgctga aaacgttgtc ggtataagcc
      361 tgtgatgccg gatagcgccg cttcgcgtct tatccggcct acgagtgagc atctgtttac
      421 acgccggata aggcgcagcc gccatccggc gccctacact tcccttaacg ctcgcgctgc
      481 ggcaatcacg ccctgtccaa acgacagtcc gccgtcgccc gccggtaacc gctgcggaaa
      541 taacaattta aaatcagaaa gataaaaggc aagacgcgcg cgcagtaagc g
//
LOCUS       DAGWFR010000442          570 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.450, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000442 DAGWFR010000000
VERSION     DAGWFR010000442.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 570)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 570)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.450"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..>570
                     /locus_tag="MOX77_004897"
     CDS             <1..>570
                     /locus_tag="MOX77_004897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461772.2"
                     /note="catalyzes the oxidation of formate to carbon
                     dioxide and molecular hydrogen; formate hydrogenlyase
                     comprises of a formate dehydrogenase, unidentified
                     electron carriers and a hydrogenase (subunit 3); Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="formate hydrogenlyase subunit 3"
                     /protein_id="HCA3360246.1"
                     /translation="LLGILSLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQ
                     RLLAYHTLENIGIILLGLGAGVTGIALNQPVLIALGLTGGLYHLLNHSLFKSVLLLGA
                     GSIWFRTGHRDIEKLGGIGKRMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFKL
                     GNSGAFVGRLLGPLLAVGLAITGALAVMC"
BASE COUNT           85 a          150 c          189 g          146 t
ORIGIN      
        1 ggctgctggg cattctctcg ctatctctgc ttggcggcaa tgcgccactg tggtggggcg
       61 tggcgctgtt ggtgcttggg atgatcaccg cctttgtcgg cggtctgtac gcgctgatgg
      121 agcataacat tcagcgcctg ctggcctatc acacgctgga aaatatcggc atcattttgc
      181 tcggtctggg cgcaggcgtt accgggattg ctctcaatca gccggtactg atcgcgctgg
      241 gtctgaccgg cgggctctat catctgctga accatagcct gttcaaaagc gtgctgttac
      301 tgggcgcggg cagcatctgg ttccgtaccg gtcatcgcga catcgaaaaa ctgggcggta
      361 ttggtaaacg gatgccggtt atttctatcg ccatgctggt cggtctgatg gcgatggcgg
      421 cgctgccgcc gctgaacggc tttgccggcg agtgggtgat ttaccagtcc ttcttcaaac
      481 tgggcaacag cggcgcgttt gttggtcgtc tgttaggacc gctgctggcg gttggcctgg
      541 cgattaccgg cgcgctggcg gtgatgtgta
//
LOCUS       DAGWFR010000443          521 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.451, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000443 DAGWFR010000000
VERSION     DAGWFR010000443.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 521)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 521)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..521
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.451"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(1..466)
                     /locus_tag="MOX77_004898"
                     /pseudo
     CDS             complement(1..466)
                     /locus_tag="MOX77_004898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459263.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system ImpA family N-terminal
                     domain-containing protein"
BASE COUNT           99 a          157 c          151 g          114 t
ORIGIN      
        1 agggcggcac tgtttgacag cgtgataccg cgaatgtctg ccatcacgcc ttcgtgatcc
       61 agcgcgccgc cagggcatta ctgcgcgcca gcgccgcatc ttcaatagat tctgcggatg
      121 cgccttcgcc ggtaagcagc tgtggatgga gtgcatcaga ccagattacg ctcagttctg
      181 ccagttgtgt gagcatttcc gccagtccct gtgcgccagc ctgctggatg cgactgcgca
      241 gcagcaggat caacacccgg atatccttac tgcgcgtgag cagacggcgc gcatcacgct
      301 caatttccgg ccagttcacg gcttccggcg tactgacaaa atcaccatat tgcgcctccg
      361 cctggggggc ggcgcggctg aacagcagca ggtattccgg atcgtactcc ggatcggggc
      421 cgcagggttg ttccgcgctt accggtttag tcagggacat gtccatatca ttactctcag
      481 tgggttaagc cgtgttcagg ttcaaaaatc atgccggtca c
//
LOCUS       DAGWFR010000444          519 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.denovo.452, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000444 DAGWFR010000000
VERSION     DAGWFR010000444.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 519)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 519)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.denovo.452"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..>519)
                     /locus_tag="MOX77_004899"
     CDS             complement(<1..>519)
                     /locus_tag="MOX77_004899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462574.1"
                     /note="catalyzes the formation of L-xylulose 5-phosphate
                     and 3-dehydro-L-gulonate 6-phosphate from L-xylulose or
                     3-dehydro-L-gulonate, respectively; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="carbohydrate kinase"
                     /protein_id="HCA3360247.1"
                     /translation="GGLFDVVSTALCAGIEDESTLNAVMGTWAVTSGIAHGLRDHEAH
                     PYVYGRYVNDGQYIVHEASPTSSGNLEWFTAQWGYLSFDEINQAVASLPKAGSDLFFL
                     PFLYGSNAGLEMTCGFYGMQALHNRAHLLQALYEGVVFSHMTHLNRMRERFTEVCALR
                     VTGGPAHSDVWM"
BASE COUNT          115 a          146 c          168 g           90 t
ORIGIN      
        1 gcatccagac gtcggagtgg gccggtccgc cggtaacgcg cagggcgcaa acctcggtaa
       61 agcgttcacg catgcggttg aggtgggtca tatggctgaa gaccacgcct tcatagagcg
      121 cctgtagcag gtgcgcgcgg ttgtgcagcg cctgcatgcc ataaaagccg caggtcatct
      181 ccagcccggc attgctgccg tagagaaacg ggagaaaaaa aaggtcgcta ccggctttcg
      241 gcaggctggc aaccgcctgg ttgatctcgt caaaagagag gtagccccac tgggcggtga
      301 accattcaag gttgccggaa gaggtcgggc tggcttcgtg aacgatatac tgcccgtcat
      361 tgacgtagcg gccatagacg taaggatggg cctcatggtc gcgcagaccg tgagcgatgc
      421 cgctggtgac ggcccaggtc cccatcaccg cattgagcgt tgattcatcc tcaataccgg
      481 cgcaaagggc ggtggaaacc acgtcaaaca ggccgccga
//
LOCUS       DAGWFR010000445        28366 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.guided.038, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000445 DAGWFR010000000
VERSION     DAGWFR010000445.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 28366)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28366)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28366
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.guided.038"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(45..1070)
                     /gene="tdh"
                     /locus_tag="MOX77_004900"
     CDS             complement(45..1070)
                     /gene="tdh"
                     /locus_tag="MOX77_004900"
                     /EC_number="1.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonine 3-dehydrogenase"
                     /protein_id="HCA3360248.1"
                     /translation="MKALSKLKAEEGIWMTDVPEPEVGHNDLLIKIRKTAICGTDVHI
                     YNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGG
                     RTHLCRNTTGVGVNRPGCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSF
                     DLVGEDVLVSGAGPIGVMAAAVAKHVGARHVVITDVNEYRLELARKMGVTRAVNVAKE
                     SLNDVMAELGMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLGIPPSDMSIDWTKV
                     IFKGLFIKGIYGREMFETWYKMAALIQSGLDLSPIITHRFSVDDFQKGFDAMCSGQSG
                     KVILSWD"
     gene            complement(1080..2276)
                     /gene="kbl"
                     /locus_tag="MOX77_004901"
     CDS             complement(1080..2276)
                     /gene="kbl"
                     /locus_tag="MOX77_004901"
                     /EC_number="2.3.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020239151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine C-acetyltransferase"
                     /protein_id="HCA3360249.1"
                     /translation="MRGDFYKQLTNDLETARAEGLFKEERIITSAQQADITVADGSHV
                     INFCANNYLGLANHPELINAAKAGMDSHGFGMASVRFICGTQDSHKALEQKLASFLGM
                     EDAILYSSCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANNDMVE
                     LEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFV
                     GENGRGSHEYCDVMGRVDIITGTLGKALGGASGGYTAARKEVVEWLRQRSRPYLFSNS
                     LAPAIVAASIKVLEMVEAGAELRDRLWANARQFREQMSAAGFTLAGADHAIIPVMLGD
                     AVVAQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVDAFTRIGK
                     QLGVIA"
     gene            2479..3411
                     /gene="rfaD"
                     /locus_tag="MOX77_004902"
     CDS             2479..3411
                     /gene="rfaD"
                     /locus_tag="MOX77_004902"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020233050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HCA3360250.1"
                     /translation="MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVD
                     LNIADYMDKEDFLIQIMSGEELGDIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLH
                     YCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANS
                     QIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVA
                     AVNLWFLESGKSGIFNLGTGRAESFQAVADATLAYHKKGSIEYIPFPDKLKGRYQAFT
                     QADLTNLRNAGYDKPFKTVAEGVTEYMAWLNRDA"
     gene            3414..4460
                     /gene="rfaF"
                     /locus_tag="MOX77_004903"
     CDS             3414..4460
                     /gene="rfaF"
                     /locus_tag="MOX77_004903"
                     /EC_number="2.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001728214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-heptose--LPS heptosyltransferase RfaF"
                     /protein_id="HCA3360251.1"
                     /translation="MKILVIGPSWVGDMMMSQSLYRTLKARYPQAIIDVMAPAWCRPL
                     LSRMPEVNEAIPMPLGHGALEIGERRRLGHSLRERRYDRAWVLPNSFKSALIPFFANI
                     PHRTGWRGEMRYGLLNDARVLDKDAWPLMVERYVALAYDKGVMRTAKDLPQPLLWPQL
                     QVSEGEKSLMYSDFSLSSERPLIGFCPGAEFGPAKRWPHYHYAELAKQLINEGYQVVL
                     FGSAKDHEAGNEILAALNSEQQAWCRNLAGETQLEQAVILIAACKAIVTNDSGLMHVA
                     AALDRPLVALYGPSSPDFTPPLSHKARVIRLITGYHKVRKGDTAQGYHQSLIDITPQR
                     VLEELHSLLSEEGV"
     gene            4460..5413
                     /gene="rfaC"
                     /locus_tag="MOX77_004904"
     CDS             4460..5413
                     /gene="rfaC"
                     /locus_tag="MOX77_004904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase RfaC"
                     /protein_id="HCA3360252.1"
                     /translation="MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIQFDWVVEEGFAQI
                     PSWHSAVDRVIPVAIRRWRKAWFSAPIKAERIAFHRAVCAYQYDAVIDAQGLVKSAAL
                     VTRLAHGIKHGMDWSTAREPLASLFYNRKHHIAKQQHAVERTRELFAKSLGYDKPQSQ
                     GDYAIAKHFLHCQQAVSDPYAVFLHATTRDDKHWPEANWRELIGLVGNTGLRIKLPWG
                     APHEEARAKRLAEGFDYVDVLPRMSLEEVARVLAGAKFVVSVDTGLSHLTAALDRPNI
                     TLYGPTDPGLIGGYGKNQMACCSPEQNLANLDATSVFGKIH"
     gene            5453..6667
                     /gene="rfaL"
                     /locus_tag="MOX77_004905"
     CDS             5453..6667
                     /gene="rfaL"
                     /locus_tag="MOX77_004905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase RfaL"
                     /protein_id="HCA3360253.1"
                     /translation="MLTTSLTLNKEKWKPIWNKALVFLFVATYFLDGITRYKHLIIIL
                     MVITAIYQVSRSPKSFPPLFKNSVFYSAAVLSLILVYSILISPDMKESFKEFENTVLE
                     GFLLYTLLIPVLLKDETKETIAKIVLFSFLTSLGLRCLAESILYIEDYNKGIMPFISY
                     AHRHMSDSMVFLFPALLNIWLFRKNSIKLVFLVLSAIYLFFILGTLSRGGWLAVLIVG
                     VLWAILNRQWKLIGVGAILLAIIGALVITQHTNKPDPEHLLYKLQQTDSSYRYTNGTQ
                     GTAWILIQENPIKGYGYGNDVYDSVYNKRVVDYPTWTFKESIGPHNTILYIWFSAGIL
                     GLASLAYLYGAIIRETASSTFRKVEISPYNAHLLLFLSFVGFYIVRGNFEQVDIAQIG
                     IITGFLLALRNR"
     gene            complement(6724..7869)
                     /locus_tag="MOX77_004906"
     CDS             complement(6724..7869)
                     /locus_tag="MOX77_004906"
                     /EC_number="2.4.1.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide
                     N-acetylglucosaminyltransferase"
                     /protein_id="HCA3360254.1"
                     /translation="MIKKIIFTVTPIFSIPPRGAAAVETWIYQVAKRLSIPNAIACIK
                     NAGYPEYNKINDNCDIHYIGFSKVYKRLFQKWARLDPLPYSQRILNIRDKVTTQEDSV
                     IVIHNSMKLYRQIRERNPNAKLVMHMHNAFEPELPDTDAKIIVPSQFLKAFYEERLPA
                     AAVSIVPNGFCAETYKRNPQDNLRQQLNIAEDATVLLYAGRISPDKGILLLLQAFKQL
                     RTLRSNIKLVVVGDPYASRKGEKAEYQKKVLDAAKEIGTDCIMAGGQSPDQMHNFYHI
                     ADLVIVPSQVEEAFCMVAVEAMAAGKAVLASKKGGISEFVLDGITGYHLAEPMSSDSI
                     INDINRALADKERHQIAEKAKSLVFSKYSWENVAQRFEEQMKSWFDK"
     gene            complement(7968..8777)
                     /gene="waaZ"
                     /locus_tag="MOX77_004907"
     CDS             complement(7968..8777)
                     /gene="waaZ"
                     /locus_tag="MOX77_004907"
                     /EC_number="2.4.99.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-D-manno-oct-2-ulosonate III transferase
                     WaaZ"
                     /protein_id="HCA3360255.1"
                     /translation="MGSVNFITHADVLQLIAKRTAEDCIIFLSGPTSRKTPLSLLRMK
                     DVIAVNGSVQYLLNNNVKPFLYLLTDVRFLHRRREDFYNFSRNSQFTIVNLDVYEQAS
                     VDDQKYIEENCLIIRSFYRREKGGFLKKIKFNILKRVHKALLISVPLSKRGRLAGFCK
                     DISIGYCSYHTIAYTAIQVAYSLKYGRIICSGLDLTGSCPRFYDESTSPMPSELSKDL
                     FKILPFFTFMRKNVSDLNIFNLSDDTAIHYDIIPYITASELEDEIYYDKIV"
     gene            complement(8927..9625)
                     /gene="rfaY"
                     /locus_tag="MOX77_004908"
     CDS             complement(8927..9625)
                     /gene="rfaY"
                     /locus_tag="MOX77_004908"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide core heptose(II) kinase RfaY"
                     /protein_id="HCA3360256.1"
                     /translation="MIIEKKVKNYTVFVKKDGEKYIEIFKDFLSYNHQVIKVFRNIED
                     TKVVLINTDYGKYILKVFSPKVKSTERFFKSLVKGDYYEKLFHQTDRVRREGFAALND
                     FYLLAEIKTLRYVKTYVMIIEYIEGIELVDMPEISDEVRGKIKQSIYSLHQHGMVSGD
                     PHKGNFILQGNEIRIIDLSGKRPSRQRKAKDRIDLERHYGIKNNVRDIGFYLLIYKKK
                     LRNFLRRIKGKEKR"
     gene            complement(9648..10658)
                     /gene="rfaJ"
                     /locus_tag="MOX77_004909"
     CDS             complement(9648..10658)
                     /gene="rfaJ"
                     /locus_tag="MOX77_004909"
                     /EC_number="2.4.1.58"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide 1,2-glucosyltransferase RfaJ"
                     /protein_id="HCA3360257.1"
                     /translation="MDSFPEIEIAEYKVFDESNNNDDNVLNISYGVDENYLDGVGVSI
                     ASVVLNNNIPLAFHIICDSYSPCFVKYIERLAVQHHIKISLYLIKVESLEVLPQTKVW
                     SRAMYFRLFAFDYLSKKVNTLLYLDADVVCKGSLQDLLQLDLTEKIAAVVKDVDSIQN
                     KVNERLSAFNLQGGYFNSGVVFVNLKLWKENALTEKAFLLLAGKEADSFKYPDQDVLN
                     ILLQDKVIFLPRPYNTIYTIKSELKDRSHKKYSNIINDNTILIHYTGATKPWHAWANY
                     PSVIYYKNARLNSPWKDSPAKDARTIVEFKKRYKHLLVQGHYFKGLLAGSAYLYRKLF
                     HK"
     gene            complement(10676..11689)
                     /gene="waaO"
                     /locus_tag="MOX77_004910"
                     /gene_synonym="rfaI"
     CDS             complement(10676..11689)
                     /gene="waaO"
                     /locus_tag="MOX77_004910"
                     /gene_synonym="rfaI"
                     /EC_number="2.4.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide
                     3-alpha-galactosyltransferase"
                     /protein_id="HCA3360258.1"
                     /translation="MSRKYFEEEVIQQTLDYNYAQHSDANKFNIAYGIDKNFLFGCGV
                     SIASVLIANREKALAFHVFTDFFGPEDQQRFDALAKQYATQIVVYLIDCERLKSLPST
                     KNWTYATYFRFIIADYFSDKTDRVLYLDADIACKGSIQELIDLNFAENEIAAVVAEGE
                     LEWWTKRSVSLATPGLVSGYFNAGFILINIPLWTAENISKKAIEMLKDPEVVQRITHL
                     DQDVLNILLVNKARFVDKKFNTQFSLNYELKDSVINPVDAETVFVHYIGPTKPWHSWG
                     AYPVSQYFLRAKSNSPWSHCALLNPVTSHQLRYAAKHMFNQKHYTSGINYYIAYFKRK
                     LLE"
     gene            complement(11695..12774)
                     /gene="waaB"
                     /locus_tag="MOX77_004911"
                     /gene_synonym="rfaB"
     CDS             complement(11695..12774)
                     /gene="waaB"
                     /locus_tag="MOX77_004911"
                     /gene_synonym="rfaB"
                     /EC_number="2.4.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide 1,6-galactosyltransferase"
                     /protein_id="HCA3360259.1"
                     /translation="MKITFVGEAVSGFGGMETVISNVIHTFENSSPKINCEMFFFCRN
                     DKMDKAWLKEIKYAQSFSNIKLSFLRRSKHVYNFSQWLKETSPDIVICIDVISCLYAN
                     KARKKSGKQFTIFSWPHFSLDHKKHAECITYADYHLAISSGIKEQMMARGISEQDISV
                     VYNPVSIKTIIVPPPERDKPAVFLYVGRLKFEGQKRVKDLFDGLARTTGEWQLHIIGD
                     GSDFEKCQAYSRELGIEQRVIWYGWQSAPWQVVQQKIKNVTALLLTSAFEGFPMTLLE
                     AMSYGIPCISSDCMSGPRDMIKPGLNGELYTPGAIDDFVGHLNRVISGEVKYQHDIIP
                     GTIERFYDVLYFKNFNNAIFSKLQK"
     gene            complement(12834..13526)
                     /locus_tag="MOX77_004912"
     CDS             complement(12834..13526)
                     /locus_tag="MOX77_004912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001772497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide pyruvyl transferase family
                     protein"
                     /protein_id="HCA3360260.1"
                     /translation="MNHSCYPKLGNEKQIYYYKCAYSRCNYVAAREKKSHELITNILG
                     IDATLSFDSLPLLVKKVESEIPESLYKEKYVCLSGAVNYNKENSSFIAGEILKKYKNH
                     KLVYLVGSPSGMNNEEPDVIESLKKFMPELIIHDAKSFTEWLSVIKNSVVLISGRYHY
                     SIAAMCFGTPTVCFSSNTPKLDEINKMFNLPGCVRTHDEFTKALNEIDNLTWQPLSKE
                     MSDLAEYNYNFL"
     gene            complement(13526..13909)
                     /locus_tag="MOX77_004913"
     CDS             complement(13526..13909)
                     /locus_tag="MOX77_004913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010989266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCA3360261.1"
                     /translation="MKVLIINDTGNSYHWGCYGTSTAIKESLRFRGINEIVTFSCEEG
                     SKIENSPKKILLVYSKNKLIRRLASHYYSKHLRRKLPDLWDSLLKSDCVIINGEGTIN
                     SIHTATRFIFFIIHVAKDILKKRFI"
     gene            complement(13950..14747)
                     /gene="rfaP"
                     /locus_tag="MOX77_004914"
     CDS             complement(13950..14747)
                     /gene="rfaP"
                     /locus_tag="MOX77_004914"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide core heptose(I) kinase RfaP"
                     /protein_id="HCA3360262.1"
                     /translation="MVELKAPLTTLWRGKDAFEEVKTLQGEVFRELEMRRTLRFELDG
                     KSYFLKWHKGTSLKEIVKNLISLRMPVLGADREWHAIHRLHELGVDTMHGVGFGEKGV
                     NPLTRTSFIITEDLTPTISLEDYCVDWAVNPPDAQVKWMIIKRVATMVRKMHAGGINH
                     RDCYICHFLLHLPFTGREEDLKISVIDLHRAQIRQHVPLRWRDKDLIGLYFSSMNIGL
                     TQRDIFRFMREYFSLPLREILQKDSGLIHQADVKAARIKERTIRKNL"
     gene            complement(14740..15864)
                     /locus_tag="MOX77_004915"
     CDS             complement(14740..15864)
                     /locus_tag="MOX77_004915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HCA3360263.1"
                     /translation="MRVAFCLYKYFPFGGLQRDFMHIAQTVAARGHQVRVYTQSWEGE
                     CPDNFELIRVPVKSRTNHGRNAEYYAWVQHHLRDHPVDRVVGFNKMPGLDVYYAADVC
                     YAEKVAQEKGFFYRLTSRYRHYAAFERATFEHGKQTQLLMLTNKQIADFQKHYQTEAE
                     RFHILPPGIYPDRKYSQQIPNSRQIYRQKNGISEQQKLLLQVGSDFTRKGVDRSIEAL
                     ASLPESLRQNTVLCVVGQDKPKKFAALAERSGVGTNVHFFSGRNDIAELMAAADLLLH
                     PAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIVDANCGEAMTEPFRQDALNEVLLRA
                     LTQPSLRSAWAENARYYADTQDLYSLPEKAADIITGDLDG"
     gene            complement(15861..16931)
                     /gene="rfaQ"
                     /locus_tag="MOX77_004916"
     CDS             complement(15861..16931)
                     /gene="rfaQ"
                     /locus_tag="MOX77_004916"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001521713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide core heptosyltransferase
                     RfaQ"
                     /protein_id="HCA3360264.1"
                     /translation="MEKPFRRILIIKMRFHGDMLLTTPVISTLKQNYPDAKIDVLLYQ
                     NTIPILSENPEINALYGISNKGAGTKEKIKNALSLIKKLRANSYDLVVNLTDQWSVAL
                     IVRFLNAKIKISQDFGNRQSALWKKSFTHLVPYAGEHAVERTLSALKPLALKQYVTET
                     TMSYRPEHWENMRQQLKQLGVTRQYVVIQPTARQLFKCWDNDKFSQVIDAVQRRGYQV
                     VLTSGPAADEMACVDAIACGCETKPVTGLAGKTRFPELGALIDHADLFIGVDSAPGHI
                     AAAVKTPVICLFGATDHVFWRPWTDDIIQFWAGNYQPMPERHELDRNKKYLSVIPAED
                     VIAATEKMLPHEARPIDLDSLL"
     gene            17340..18617
                     /gene="waaA"
                     /locus_tag="MOX77_004917"
     CDS             17340..18617
                     /gene="waaA"
                     /locus_tag="MOX77_004917"
                     /EC_number="2.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid IV(A) 3-deoxy-D-manno-octulosonic acid
                     transferase"
                     /protein_id="HCA3360265.1"
                     /translation="MLELLYTALLYLIQPLIWIRLWVRGRKAPAYRKRWGERYGFYRR
                     PLKPGGIMLHSVSVGETLAAIPLVRALRHRYPDLPITVTTMTPTGSERVQSAFGNDVQ
                     HVYLPYDLPDALNRFLNKIDPKLVLIMETELWPNLIAALHKRHIPLVIANARLSARSA
                     AGYAKLGKFVRTLLRRITLIAAQNEEDGERFVALGAKNNQVTVTGSLKFDISVTPQLA
                     AKAVTLRSQWAPHRPVWIATSTHDGEESIVIAAHQALLHQFPNLLLILVPRHPERFPD
                     AINLVRQAGLSYITRSSGEVPSASTQVVVGDTMGELMLLYGIADLAFVGGSLVERGGH
                     NPLEAAAHAIPVLMGPHTFNFKDICARLEQASGLITITDAATLAKEVSSLLTDADYRN
                     FYGRHAVEVLYQNQGALQRLLQLLEPYLPPKTH"
     gene            18626..19105
                     /gene="coaD"
                     /locus_tag="MOX77_004918"
     CDS             18626..19105
                     /gene="coaD"
                     /locus_tag="MOX77_004918"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HCA3360266.1"
                     /translation="MQKRAIYPGTFDPITNGHLDIVTRATQMFDHVILAIAASPGKKP
                     MFTLNERVALAQKATAHLGNVEVVGFSDLMANFARDRQANILIRGLRAVADFEYEMQL
                     AHMNRHLMPQLESVFLMPSKEWSFISSSLVKEVARHQGDVTHFLPDNVHQALMDKLK"
     gene            complement(19133..19942)
                     /gene="mutM"
                     /locus_tag="MOX77_004919"
     CDS             complement(19133..19942)
                     /gene="mutM"
                     /locus_tag="MOX77_004919"
                     /EC_number="3.2.2.23"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-formamidopyrimidine
                     glycosylase/DNA-(apurinic or apyrimidinic site) lyase"
                     /protein_id="HCA3360267.1"
                     /translation="MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIYRL
                     SDTPVLSVQRRAKYLLLELPDGWIIIHLGMSGSLRILSEALPAEKHDHVDLVMSNGKI
                     LRYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMD
                     NKLVVGVGNIYASESLFAAGIHPDRLASSLSTEECDLLARVIKAVLLRSIEQGGTTLK
                     DFLQSDGKPGYFAQELQVYGRKGEPCRVCGTPIVATKHAQRATFYCRHCQK"
     gene            complement(20040..20207)
                     /gene="rpmG"
                     /locus_tag="MOX77_004920"
     CDS             complement(20040..20207)
                     /gene="rpmG"
                     /locus_tag="MOX77_004920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010847629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HCA3360268.1"
                     /translation="MAKGIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVR
                     QHVIYKEAKIK"
     gene            complement(20228..20464)
                     /gene="rpmB"
                     /locus_tag="MOX77_004921"
     CDS             complement(20228..20464)
                     /gene="rpmB"
                     /locus_tag="MOX77_004921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008457442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HCA3360269.1"
                     /translation="MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEK
                     RFVTLRVSAKGMRIIDKKGIETVLSELRARGEKY"
     gene            complement(20682..21347)
                     /gene="radC"
                     /locus_tag="MOX77_004922"
     CDS             complement(20682..21347)
                     /gene="radC"
                     /locus_tag="MOX77_004922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HCA3360270.1"
                     /translation="MDTLDELLPREKMLRSGIASLSDVELLALFLRTGTPGKDVMTLA
                     KEILQHFGSLYGLLSADFAQFRGVNGIGLAKFAQLKGIAELARRYYSVRMNEESALLS
                     PEMTREFLQSQLTGEEREIFLVIFLDAQHRVLQHSRLFSGTLNHVEVHPREIVREAIK
                     LNASAVILAHNHPSGCAEPSKADKLITERVIKCCQFMDIRVLDHLIIGRGEYVSFAER
                     GWI"
     gene            21523..22743
                     /gene="coaBC"
                     /locus_tag="MOX77_004923"
     CDS             21523..22743
                     /gene="coaBC"
                     /locus_tag="MOX77_004923"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418096.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HCA3360271.1"
                     /translation="MSLAGKKIVLGVSGGIAAYKTPELVRRLRERGADVRVAMTEAAK
                     AFITPLSLQAVSGYPVSDSLLDPAAEAAMGHIELGKWADLVILAPATADLIARVASGM
                     ANDLVSTICLATPAPVAVLPAMNQQMYRAAATQHNLEVLASRGLFIWGPDSGSQACGD
                     VGPGRMLDPLAIVDKAAAHFAAVNDLRHLNIMITAGPTREPLDPVRYISNYSSGKMGF
                     AIAAAAARRGANVTLVSGPVSLPMPPFVKRVDVITALDMEAAVQAAVQQQHIFISCAA
                     VADYRAETIASEKIKKQAAQSDELIIKMVKNPDIVAGVAALSDNRPYVVGFAAETNNV
                     EEYARQKRTRKNLDLICANDVSLSNQGFNSDKNALHLFWQDGDKVLPLERKELLGQLL
                     LDEIVTRYDEKNRR"
     gene            22721..23179
                     /gene="dut"
                     /locus_tag="MOX77_004924"
     CDS             22721..23179
                     /gene="dut"
                     /locus_tag="MOX77_004924"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000976070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HCA3360272.1"
                     /translation="MMKKIDVKILDPRVGQQFPLPTYATSGSAGLDLRACLDDAVELA
                     PGATTLVPTGLAIHIADPSLAAVMLPRSGLGHKHGIVLGNLVGLIDSDYQGQLMVSIW
                     NRGQDSFTIEPGERIAQMVFVPVVQAEFNLVEAFDATERGEGGFGHSGRK"
     gene            23287..23883
                     /gene="slmA"
                     /locus_tag="MOX77_004925"
     CDS             23287..23883
                     /gene="slmA"
                     /locus_tag="MOX77_004925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000818604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoid occlusion factor SlmA"
                     /protein_id="HCA3360273.1"
                     /translation="MAEKQTAKRNRREEILQSLALMLESSDGSQRITTAKLAASVGVS
                     EAALYRHFPSKTRMFDSLIEFIEDSLITRINLILKDEKDTSTRLRLIVLLILGFGERN
                     PGLTRILTGHALMFEQDRLQGRINQLFERIEAQLRQVLREKRMREGEGYTTDKNLLAS
                     QLLAFCEGMLSRFVRSEFKYRPTDDFDARWPLIAAQLQ"
     gene            complement(23961..24602)
                     /gene="pyrE"
                     /locus_tag="MOX77_004926"
     CDS             complement(23961..24602)
                     /gene="pyrE"
                     /locus_tag="MOX77_004926"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HCA3360274.1"
                     /translation="MKPYQRQFIEFALNKQVLKFGEFTLKSGRKSPYFFNAGLFNTGR
                     DLALLGRFYAEALVDSGIEFDLLFGPAYKGIPIATTTAVALAEHHDKDLPYCFNRKEA
                     KDHGEGGSLVGSALQGRVMLVDDVITAGTAIRESMEIIQAHRATLAGVLISLDRQERG
                     RGEISAIQEVERDYGCKVISIITLKDLIAYLEEKPDMAEHLAAVRAYREEFGV"
     gene            complement(24681..25397)
                     /gene="rph"
                     /locus_tag="MOX77_004927"
     CDS             complement(24681..25397)
                     /gene="rph"
                     /locus_tag="MOX77_004927"
                     /EC_number="2.7.7.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006803115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HCA3360275.1"
                     /translation="MRPAGRSANQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIE
                     EGVPRFLKGQGQGWITAEYGMLPRATHTRNAREAAKGKQGGRTMEIQRLIARALRAAV
                     DLKTLGEFTITLDCDVIQADGGTRTASITGACVALADALNKLVANGKLKTNPMKGMVA
                     AVSVGIVNGEAICDLEYVEDSAAETDMNVVMTEDGRIIEVQGTAEGEPFSHEELLTLL
                     ALARGGIESIVATQKAALEN"
     gene            25523..26386
                     /locus_tag="MOX77_004928"
     CDS             25523..26386
                     /locus_tag="MOX77_004928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005122606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YicC family protein"
                     /protein_id="HCA3360276.1"
                     /translation="MIRSMTAYARREIKGEWGSATWEMRSVNQRYLETYFRLPEQFRS
                     LEPVVRERIRTRLTRGKVECMLRFEPDASAQGELILNEKLAKQLVSAANWVKMQSDEG
                     EINPVDILRWPGVMAAQEQDLDAIAAEILAALDGTLDDFIVARETEGQALKALIEQRL
                     EGVSAEVAKVRAHMPEILQWQRERLVAKLEDAQVQLENNRLEQELVMMAQRIDVAEEL
                     DRLEAHVKETYNILKKKEAVGRRLDFMMQEFNRESNTLASKSINADVTNSAIELKVLI
                     EQMREQIQNIE"
     gene            complement(26436..27338)
                     /locus_tag="MOX77_004929"
     CDS             complement(26436..27338)
                     /locus_tag="MOX77_004929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCA3360277.1"
                     /translation="MNLLQMDMNLLKVLYVLLETSSTGKTAQKLALSPSAVSHALMRL
                     RDALNDPLFRREGNRQIATPYAQALRDKLAPVFVSLNEELFGDKENGSRCFRVVLPPA
                     LNALLTPVLAEKGHLHQAVIECLPFARRPWRDELLDSSVDLVLAIGDHQKQVSALHYE
                     RVGTTRLIAVYGAPLRSRLENAAALNFADLQHYQHIYCLPWTKENNELDRQQARAGFE
                     RPLAFVCHDYSQLAPAVQSAPLMAIVPRPWYENLSDKRGLFVLPLAGEQAEGAIFMQY
                     RASTVEWKRRLIDAIRRKLKTYYR"
     gene            27412..28296
                     /locus_tag="MOX77_004930"
     CDS             27412..28296
                     /locus_tag="MOX77_004930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001083230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HARLDQ motif MBL-fold protein"
                     /protein_id="HCA3360278.1"
                     /translation="MNRYVLFFVCIFSTSALPAMAALDPSQPLSPAPPLSLFKAWAKP
                     MKPFQITEGVWYVGTENLSSILLTTPAGHILIDAGLDESAPQIKANIEAAGFRFTDVR
                     YLLSSHARLDQAGGMARLKAWSGAQLVASQPNADQMARGGRQDFALGDALPFPLVTTD
                     KIIHNQESISLGGVTVTALFTPGHLPGSTSWRVTLRNGKTLIYADSLATPDYLLINNK
                     NYPDLVTDIQSSFKTLAAQHVDIFIANKGDRFGLLEKRQQLRNGDTQAFFDSNGLQQY
                     VERSRQRFITQLTAQQPQ"
BASE COUNT         7475 a         7061 c         6429 g         7401 t
ORIGIN      
        1 cttgccgcct ttaagcaact cgaattattt tgggtatata catattaatc ccagctcaga
       61 atgacttttc ctgactggcc tgaacacatg gcgtcaaaac ctttctgaaa atcatcaaca
      121 gagaaacgat gggtgataat cggtgacaga tccagaccgg actggatcag cgccgccatt
      181 ttgtaccacg tttcgaacat ctcacgacca taaatacctt taatgaacaa gcctttaaag
      241 atgacttttg tccagtcgat agacatatct gatggcggaa tccccagcat cgcaatacga
      301 ccgccgtgat tcatggtgtc cagcatggta cgaaacgccg gcggcgcgcc ggacatctcc
      361 agacccacat caaacccttc ggtcattccc agctccgcca tgacgtcgtt caggctctct
      421 ttcgcgacgt tgaccgcgcg ggtgacgccc attttgcgcg ccagctccag acggtattca
      481 ttgacgtcag taatcaccac atgacgcgcg ccgacatgtt tcgccaccgc ggcggccatt
      541 acgccgattg gccccgcccc cgataccagt acatcttcgc cgaccagatc gaaagacagc
      601 gccgtatgca ccgcattacc aaacgggtcg aaaatagagg ctaaatcatc agaaatgtta
      661 tccgggattt taaacgcatt gaatgccggg atgaccaggt attccgcgaa gcagccggga
      721 cggttgacgc ccacgccggt ggtgttgcga cacaggtgag tacgaccgcc acggcagttg
      781 cggcaatgac cgcaagtgat gtgaccttcg ccggagacgc gatcgccgat tttaaagcct
      841 ttcacttcct gaccgatgcc gaccacttcg ccgacatatt catgccccac gaccatcgga
      901 accgggatgg ttttttgcga ccattcatcc cagttataga tgtgaacgtc agtgccgcag
      961 atggctgttt tacggatttt aatcagcaaa tcgttatggc cgacttccgg ttccggaacg
     1021 tcggtcatcc agatgccctc ttccgctttc agtttggata acgctttcat cttacatcct
     1081 caggcaatca cgcccagttg tttaccaata cgcgtgaacg cgtctaccgc acgcgtaatt
     1141 tgctcaggcg tatgcgccgc agacatctgg gtacgaatac gcgcctgacc ttttggtacg
     1201 accggataga agaaaccggt aacgtaaatg ccctcttttt gcagttcgcg ggcaaatttc
     1261 tgcgcgacaa ccgcatctcc cagcattacc gggatgatgg cgtgatccgc gcctgccagc
     1321 gtaaatcccg cggcagacat ctgctcacgg aactgccggg cgttcgccca caagcgatcg
     1381 cgcagttctg cgcccgcttc caccatctcc aacactttaa tagaagccgc cacgattgcc
     1441 ggcgccaggg agttggagaa cagatatggg cgggaacgct gacgcaacca ctcaacgacc
     1501 tctttacgcg ccgcggtata gccgccggat gcgccgccta acgctttgcc cagcgtaccg
     1561 gtaataatat ctacgcggcc cattacgtcg cagtattcat gggaaccgcg accgttttcg
     1621 ccgacaaagc ctaccgcgtg agaatcatca accatcacca gcgcatcgta tttatcggcc
     1681 agatcacaga cgcctttcag attggcgatg acgccatcca ttgagaacac cccgtcggtg
     1741 gcgatcagga catgacgcgc gccggcttca cgcgcctctt tcagccgagc ttccagctct
     1801 accatatcgt tgttggcata gcgatagcgc ttcgctttac acaaacgcac gccgtcaatg
     1861 atagacgcgt ggttcagcgc gtcggaaata atagcgtctt ccgcgcccag caacgtctca
     1921 aacaagccgc cgttagcgtc gaaacaggag gaatacagaa tcgcatcttc catgccgagg
     1981 aagcttgcca gcttttgctc cagcgctttg tggctgtcct gggtgccgca gataaaacgc
     2041 acggacgcca taccgaaacc gtggctgtcc atgcccgctt ttgcggcatt aatcagctca
     2101 gggtgattcg ccagcccgag atagttattg gcgcaaaagt taataacgtg gcttccatcc
     2161 gccacggtga tatccgcctg ctgcgcagac gtaataatgc gctcttcttt aaacaatcct
     2221 tccgcccggg cggtttccag atcgttggtt aactgtttgt aaaaatcccc acgcattgcg
     2281 attctccaga ctgggcaaat ttcagcacat attacccaaa gctatacggt gatacgagat
     2341 gacgcgtcat cacttcttta aaatgcagca taaatcacgc gtatcctcac gagttatcag
     2401 tgaatggatg aatagtgata tgataaaagc attcatgtct gagacagtct ctgacaccat
     2461 aattcaaagg ttacagttat gatcatcgtt accggcggcg cgggctttat cggcagcaat
     2521 atcgttaagg ccctgaatga taaaggtatc accgatattc tggtggtgga taacctgaaa
     2581 gacggcacca agtttgtaaa cctggtggat ctgaacattg ctgactatat ggataaggaa
     2641 gatttcctga tccagattat gtccggagaa gagctcggcg atatcgaagc tattttccat
     2701 gaaggcgcct gctcttccac caccgagtgg gacggcaagt atatgatgga taataactat
     2761 caatactcca aagagctgct gcactattgt cttgagcgcg aaatcccgtt cctctacgcc
     2821 tcttctgccg ccacctatgg cggtcgcacg tctgatttca tcgaatcgcg tgaatacgaa
     2881 aaaccgctta acgtttacgg ctattctaaa ttcctgtttg atgaatacgt gcgccagatc
     2941 ctgccagaag cgaactcgca gattgtcggt ttccgctatt tcaacgtcta tggaccacgt
     3001 gaaggccata aaggcagcat ggcaagcgtg gcatttcatc tgaatacaca gttaaacaac
     3061 ggcgaaagtc cgaaactgtt tgaaggcagc gaaaacttca agcgcgactt cgtttacgtg
     3121 ggcgatgtgg ccgccgttaa cctgtggttc ctggaaagcg gcaagtccgg catctttaac
     3181 ctgggcacag gccgcgcgga atctttccag gccgtcgccg acgcgacgct ggcataccat
     3241 aaaaaaggca gcattgaata cattccgttc ccggataagc tgaaaggtcg ctatcaggcg
     3301 tttacgcagg cggatttaac caatctgcgc aacgcgggct acgacaaacc ctttaagacc
     3361 gtcgccgaag gcgtcacgga gtatatggcc tggctgaacc gcgacgcgta agtatgaaaa
     3421 ttttggtcat tggcccgtcc tgggtgggcg acatgatgat gtcgcaaagt ctctatcgca
     3481 cgcttaaagc gcgctatccc caggcgataa tcgacgtgat ggcgccagcc tggtgccgtc
     3541 cgttgttatc gcgtatgccg gaagttaacg aggcgatacc catgccgctg ggccacggcg
     3601 cgctggaaat cggcgagcgc cgcagattgg gccatagcct gcgagagagg cgctacgatc
     3661 gcgcctgggt gctgccaaat tcgtttaaat cggcgctgat tcctttcttt gccaatatcc
     3721 cgcaccgtac cggctggcgt ggcgaaatgc gctatggcct gctgaacgat gcgcgcgtcc
     3781 ttgataaaga cgcctggccg ctgatggtgg agcgctacgt ggcgctggcc tatgacaagg
     3841 gcgtgatgcg cacggcgaaa gatctgccgc agccgctgct ctggccacag ctccaggtta
     3901 gcgagggtga aaaatcgctg atgtacagcg atttttcgct atcttctgaa cgtcctctaa
     3961 tcggcttttg ccccggagca gaatttggcc cggcaaaacg ttggccgcac tatcactacg
     4021 ccgaactggc aaagcagctc attaacgaag ggtatcaggt cgtgctgttt ggctcggcaa
     4081 aagaccatga agccggaaat gagatcctgg cggcgctgaa tagcgagcaa caggcatggt
     4141 gtcgcaacct ggcaggggaa acccagctgg aacaggccgt cattctgata gccgcctgta
     4201 aagccatcgt cactaacgat tccgggctga tgcacgtcgc ggcggcgctc gaccgcccgc
     4261 tggtcgcgtt gtatggccca agtagcccgg atttcacgcc gccgctgtct cataaggccc
     4321 gggtgattcg tctcattacg ggttaccaca aagtgcgtaa aggcgatacg gcgcaaggct
     4381 atcaccagag cctgatcgat atcacgccgc agcgggttct ggaagagctt cattcgctgt
     4441 tgtcggaaga gggcgtttaa tgcgagtttt gatcgttaaa acatcatcga tgggcgacgt
     4501 attacatacc ctgcctgcgc ttaccgacgc gcaacaggcg attccgggga ttcaatttga
     4561 ttgggttgtc gaagaagggt ttgcacaaat tccgtcctgg cacagtgctg tcgatcgcgt
     4621 gattcccgtc gctattcgcc gttggcgcaa ggcctggttt tccgcgccca ttaaagcgga
     4681 acgcatagcc tttcatcggg cggtatgcgc ataccaatac gacgctgtga ttgatgcgca
     4741 ggggctggta aaaagcgcgg cgctggtgac gcgtctggcg catgggataa agcacggtat
     4801 ggactggagt accgcccgcg aaccgctggc cagcctgttt tataaccgta aacaccatat
     4861 cgcaaagcaa caacatgcgg ttgaacggac gcgcgagctg ttcgccaaaa gcctgggata
     4921 cgataaaccg cagtcgcagg gcgattatgc catcgcaaaa cattttctgc attgccagca
     4981 ggcggttagc gatccgtatg cggtgttttt acatgccacg acccgcgatg ataaacactg
     5041 gccggaagca aactggcgcg agcttatcgg cctggtgggc aacaccggat tacggataaa
     5101 acttccctgg ggcgcgcctc atgaggaggc tcgtgctaaa cgactggccg aaggctttga
     5161 ctatgtggat gtgttaccgc gcatgagcct ggaggaggtc gctagagtgc tggctggcgc
     5221 aaaatttgtc gtatcggttg ataccggcct gagccatctc accgccgcgc tcgacagacc
     5281 gaatattacg ctatatggcc caacggaccc tgggttaatt ggaggttatg ggaagaacca
     5341 aatggcatgc tgctcaccag aacaaaacct ggcgaattta gatgccacaa gcgtatttgg
     5401 aaagattcat taaagagact ctgtctcatc ccaaacctat tgtggagaaa agatgctaac
     5461 cacatcatta acgttaaata aagagaaatg gaagccgatc tggaataaag cgctggtttt
     5521 tctttttgtt gccacgtatt ttctggatgg tattacgcgt tataaacatt tgataatcat
     5581 acttatggtt atcaccgcga tttatcaggt ctcacgctca ccgaaaagtt tcccccctct
     5641 tttcaaaaat agcgtatttt atagcgcagc agtattatca ttaatccttg tttattccat
     5701 actcatatcg ccagatatga aagaaagttt caaagaattt gaaaatacgg tactggaggg
     5761 tttcttatta tatactttat taattcccgt actattaaaa gatgaaacaa aagaaacgat
     5821 tgcgaaaata gtacttttct cctttttaac aagtttagga cttcgctgcc ttgcagagag
     5881 tattctgtat atcgaggact ataataaagg gattatgcca ttcataagct atgcgcatcg
     5941 acatatgtcc gattccatgg ttttcttatt tccagcatta ttgaatattt ggttgtttag
     6001 aaaaaattca attaagttgg tttttttggt gcttagcgct atctaccttt tctttatcct
     6061 gggaacccta tcgcgagggg gatggttggc agtgctcata gtaggtgttc tatgggcaat
     6121 actgaatcgc caatggaagt taataggagt tggtgccatt ttattagcca ttatcggcgc
     6181 tttggttatc actcaacata ctaacaaacc agacccagaa catttacttt ataaattaca
     6241 gcagacagat agctcatatc gttatactaa cggaacccag ggcaccgcgt ggatactgat
     6301 tcaggaaaac ccgatcaagg gctacggcta tggtaatgat gtgtatgata gtgtttataa
     6361 taaacgcgtt gtcgattatc caacgtggac ctttaaagaa tctatcggtc cgcataatac
     6421 cattctgtac atctggttta gtgcaggcat attgggtctg gcgagcctgg cctatttata
     6481 tggcgctatc atcagggaaa cagccagctc taccttcagg aaagtagaga taagccccta
     6541 caatgctcat ctcttgctat ttttatcttt cgtcggtttt tatatcgttc gtggcaattt
     6601 tgaacaggtc gatattgctc aaattggtat cattaccggt tttctgctgg cgctaagaaa
     6661 tagataaaaa agcgcgctga tacttattac ggtatcagcg cgttttccat catcaggact
     6721 caatcactta tcaaaccagc ttttcatttg ttcctcgaaa cgctgcgcta cattttccca
     6781 actgtatttt gaaaacacca gggattttgc tttttcggca atctggtggc gttccttatc
     6841 agcaagcgca cggttaatat cattaattat actgtcgctc gacataggtt ctgcgaggtg
     6901 atagcccgtt atgccatcta acacaaattc gctaatcccc ccttttttgc tggcaagaac
     6961 cgcttttcct gctgccatcg cttctacagc caccatgcaa aatgcttctt caacctgaga
     7021 tggcacgata accagatcgg ctatatgata gaagttatgc atctggtcag gtgattgccc
     7081 tccagccata atgcaatcag ttccaatctc ttttgcggcg tccagtactt tcttttgata
     7141 ctctgctttt tcacccttgc ggcttgcata agggtcgcca acaacgacaa gtttaatatt
     7201 acttcttaag gtacgtaatt gtttgaacgc ctgcaaaagc aacaggatgc ctttatcagg
     7261 cgaaattctc ccggcatata agagaacggt ggcatcttcc gcaatattta attgctgacg
     7321 aagattatct tgtgggtttc ttttataagt ctcagcacaa aaaccattag gcacaatact
     7381 aacagcagcg gcgggcaatc tttcttcata aaacgcttta agaaactgac tgggcacgat
     7441 aatttttgca tccgtatcag gaagttctgg ttcaaatgcg ttatgcatgt gcataaccag
     7501 ttttgcattc ggattgcgct ctctgatctg ccgatacagt ttcatactat tatgaataac
     7561 aatgacgcta tcttcctggg tagtcacttt atctctaata ttaaggatgc gctgggaata
     7621 gggtagtggg tcgagacgag cccatttctg aaaaagacgc ttataaactt tactaaaccc
     7681 aatgtaatga atatcacagt tatcgtttat tttattatat tcaggatagc cggcattctt
     7741 tatacaagca atagcattcg gtattgataa tcgttttgca acctggtaaa tccaggtttc
     7801 taccgcagcc gcgccacgag gaggaattga aaatatagga gtaacagtaa atatgatttt
     7861 tttaatcata atagctataa tccagaatag ttaactttat agaaaagata tattatagaa
     7921 aaagaaatgc gtgccgaagc aacgcaaaat aatgatttat ctagtgtcta gacaatttta
     7981 tcgtaatata tttcatcttc aagttccgag gctgtaatat atggaataat atcgtaatga
     8041 attgcagtat catctgataa attaaagata tttaaatcac tcacattttt tctcataaaa
     8101 gtaaaaaatg gcagtatttt aaacaggtct ttactaagct cagatggcat agggctggta
     8161 gattcgtcat agaaacgtgg gcaactccct gttaagtcaa gcccagaaca tataatacgg
     8221 ccatacttga gggaataggc aacctgaata gcggtataag caatagtatg gtaagagcaa
     8281 tacccgatgc tgatatcctt acaaaatcca gccagtcgtc ctcttttcga aagaggaact
     8341 gaaataagta atgctttatg aacccgcttg aggatattaa atttaatttt ctttaaaaag
     8401 cccccttttt ctcggcgata aaaggagcga ataattaaac agttttcttc aatatatttt
     8461 tgatcatcca ctgaagcctg ttcgtacaca tcaagattga cgatagtaaa ctgactgtta
     8521 cggctaaagt tataaaaatc ttcgcgccgg cgatggagga agcgaacatc cgtcagaagg
     8581 tacaaaaatg gcttgacgtt attgtttagc aaatattgaa cagaaccatt gactgcaatg
     8641 acatctttca ttcgtaacaa ggacagcggc gtctttctgg acgtagggcc agaaagaaaa
     8701 ataatacaat cttcagccgt tcttttcgca ataagttgca gaacatcggc gtgagttatg
     8761 aagttaacgc tgcccataaa aaactcgtat gtttatcatg caacctataa ataaatgtta
     8821 tattcaatag ctaatattac atctcaaatt ctctcaagta tgtcataacg ctgcagcaaa
     8881 taaaagtcag tcagcccctt aaattaaacc aaacgtgcta cattgatcag cgcttttcct
     8941 tacccttaat acgacgcaag aaatttcgaa gttttttctt ataaatcaat aagtaaaatc
     9001 caatatctct cacattattt ttgataccat aatgtctttc taaatcaata cgatcctttg
     9061 cttttcgttg cctggaaggt ctttttccgg acaaatcgat aattctgatc tcattacctt
     9121 gcaggataaa gttaccttta tggggatcgc ccgaaaccat accatgctga tgcagagaat
     9181 atatcgactg tttgattttc cctctcacct cgtcagaaat ttctggcata tcaacaagtt
     9241 caataccttc aatatactca attatcatca cgtatgtttt tacatagcgt aatgttttaa
     9301 tctccgccag caggtaaaaa tcattaagcg ccgcaaaccc ttcacgccgc acgcgatctg
     9361 tctgatgaaa aagcttttcg tagtaatctc cttttactaa cgatttgaaa aagcgttcag
     9421 tactttttac ttttggacta aatactttga gaatatattt tccgtagtct gtattaatca
     9481 atacaacttt tgtatcttct atattacgga agactttaat aacctgatga ttataagata
     9541 gaaaatcttt gaatatctca atatattttt caccgtcttt tttgacaaag acggtatagt
     9601 ttttaacctt tttttcaata atcataatgg agatttaggg aagggaatta tttgtggaaa
     9661 agtttacgat aaagatatgc gcttccagcc agaaggcctt taaaataatg cccctgcacg
     9721 agaagatgtt tatatcgctt cttaaattca actatggtac gcgcatcttt tgcaggagaa
     9781 tctttccagg gcgagttcag tcgtgcattt ttataataga taactgaagg ataatttgcc
     9841 caggcatgcc atggttttgt agcgcccgta taatgaatta aaatagtatt atcattaatt
     9901 atattgctat attttttatg tgacctatct ttcaactcac ttttgatagt ataaatggta
     9961 ttatatggtc gaggtagaaa aataacttta tcctgtagga gaatattcaa aacatcctga
    10021 tcgggatatt taaaagagtc agcttcttta cctgccagaa gtaaaaatgc cttttcagtt
    10081 aaggcattct ctttccataa tttcaggtta acaaaaacca cgccggagtt aaaataacca
    10141 ccttgtaaat taaaagcgct taatctctca tttaccttat tctggatgga atcaacatct
    10201 tttactaccg cagcaatctt ctctgtcaga tcaagctgta gaagatcttg caaagatcct
    10261 ttacatacaa catcggcatc caaataaagt aaggtgttta ccttcttgct gagataatcg
    10321 aaagcaaata aacgaaaata cattgctctc gaccatactt tagtttgggg caatacttca
    10381 aggctttcta ctttaataag ataaagagaa attttaatgt gatgctgtac ggctaaacgc
    10441 tctatatatt ttacaaaaca cggggagtat gagtcacaaa taatatgaaa agcaagcggg
    10501 atattattgt ttaatacaac ggaagcgatt gataccccca caccatcaag atagttttca
    10561 tcgacgccat aagaaatgtt taatacgtta tcatcattat tattactttc atcaaaaact
    10621 ttatattcag ctatctctat ctcaggaaat gaatccatta catcacctat gggttttatt
    10681 caagaagttt acgtttaaag taggctatat aataatttat acccgaagta taatgcttct
    10741 gattaaacat atgctttgcc gcataacgta actgatggct agtgactgga tttaaaagtg
    10801 cacaatgaga ccatggtgag ttgctcttag cccgtaaaaa atattgtgac acggggtaag
    10861 ccccccaact atgccagggc ttcgttggtc cgatataatg aacaaataca gtctcagcat
    10921 caactggatt aataactgaa tcttttaatt catagttaag actaaattgc gtattaaatt
    10981 ttttatcaac aaaacgcgct ttattcacta acaatatatt taatacatcc tgatcaaggt
    11041 gcgttatgcg ctgtactacc tccggatctt ttagcatttc aatcgctttc ttagagatat
    11101 tttctgcggt ccaaagaggt atgttaatta aaataaaacc ggcattaaaa tagccagaaa
    11161 ccaacccagg cgttgccagg ctaaccgagc gcttagtcca ccactccaac tcgccttcag
    11221 caacaaccgc cgcaatctca ttttcagcga aattaagatc aataagttcc tgaatacttc
    11281 ccttacatgc aatatctgca tccagataaa gcactctatc tgttttatct gaaaaatagt
    11341 cggcaataat gaatctaaag tatgttgcat aggtccagtt tttggtactg ggtagcgatt
    11401 ttaatcgctc acagtcaatg agataaacaa caatctgcgt agcgtactgt tttgctaatg
    11461 catcaaatcg ctgctgatct tcagggccaa agaaatcggt aaaaacatgg aaagctaacg
    11521 ccttctcacg gttagcaatg agaaccgatg caatagagac accacagcca aaaagaaagt
    11581 ttttatcaat cccataagct atattaaatt tattagcatc actatgttgt gcatagttat
    11641 aatctaaagt ctgttgaatg acttcttctt caaaatattt tctgctcata gtgatcactt
    11701 ttgtaatttc gagaatatcg cattattaaa atttttaaaa tatagcacat cgtaaaatcg
    11761 ctcaatcgtg ccgggaataa tatcatgctg atattttact tcaccggaaa tgactcgatt
    11821 aaggtgtcct acaaaatcat ctatagcacc cggagtgtaa agctcaccat tcaaaccggg
    11881 tttaatcata tcgcgcggac cagacataca atcagaacta atacatggaa ttccatatga
    11941 cattgcttcc agcagagtca taggaaatcc ctcaaatgca gaggtaagta gtaacgcggt
    12001 aacatttttt attttttgct gtacgacttg ccacggcgcg ctttgccaac cataccagat
    12061 cacacgctgc tcaataccaa gctcccggct ataggcctgg cacttttcaa aatctgagcc
    12121 atcaccaata atatgtagct gccattcccc tgtcgtacga gctaagccat caaataaatc
    12181 tttaactctt ttctgccctt caaatttaag acgccctaca tagagaaata cagcgggttt
    12241 atcgcgctca ggcggcggca caatgattgt tttaatagag acaggattgt aaacgacgct
    12301 aatatcttgc tctgagatcc cccgtgccat catctgttct ttaataccac tactgatggc
    12361 cagatgataa tccgcgtacg ttatacattc tgcatgtttt ttatggtcga gcgaaaaatg
    12421 cggccacgag aaaatagtaa actgtttacc acttttctta cgtgctttat tggcataaag
    12481 gcatgagatg acatcaatac atatcacaat atccggtgac gtttctttca gccactgact
    12541 aaaattataa acatgcttag atcgacgaag aaaacttaat tttatatttg agaatgattg
    12601 cgcatattta atctctttta gccatgcttt atccattttg tcattacgac aaaagaaaaa
    12661 catttcacag ttgattttcg gagagctatt ttcaaacgta tggataacgt tgctaataac
    12721 ggtttccatc cctccgaagc cagataccgc ttcgccaaca aacgttattt tcataatatt
    12781 cttatgaatt agaaagttaa tattataata acctattaat caacctcaat aaattaaagg
    12841 aaattatagt tgtattcagc taagtcagac atctctttag aaagtggttg ccatgttaaa
    12901 ttgtcaattt cgttaagcgc tttagtaaat tcatcatgtg ttctgacaca gcctggtaaa
    12961 ttaaacatct tattaatttc atccaatttt ggtgtattag atgaaaagca tactgttggt
    13021 gtaccaaaac acattgccgc aatagaataa tggtaccttc ctgagattag tactactgag
    13081 ttcttaataa cagatagcca ttcagtaaaa gacttcgcat catgaataat tagttcaggc
    13141 ataaatttct tcaggctttc gattacatct ggctcctcat tattcatacc agatggagag
    13201 ccgacaagat aaactaattt gtgattttta tatttcttta aaatctcacc agctataaaa
    13261 gatgaatttt ctttattata attaaccgca ccagataaac atacgtattt ttctttatac
    13321 aaactttctg gaatttcgct ttcaaccttt ttgacaagta acggcaagct atcaaaagat
    13381 aaagtagcat caatgcctaa tatattagta attaattcat gcgatttttt ttctcttgcc
    13441 gcaacataat tacatcgtga ataagcacac ttataataat aaatttgttt ctcattaccc
    13501 aatttaggat aacaagagtg atttattaga taaacctttt tttaagtata tcttttgcaa
    13561 cgtgaattat aaaaaatata aatcttgttg ccgtatgaat actattaata gttccttcac
    13621 catttattat aacgcaatca ctttttaata atgaatccca taaatcaggt aatttcctgc
    13681 gaagatgttt gctataataa tggctagcta acctccttat taacttattc ttactgtaca
    13741 caagcagaat ttttttgggt gagttttcta tcttactacc ttcttcgcac gagaaagtga
    13801 ctatttcatt aataccacga aaccttaaac tttcttttat cgcagtcgat gttccataac
    13861 atccccaatg ataagagtta cctgtatcat ttataattaa tactttcatg acatgtagtc
    13921 caaatcaaat aataagtcag tataataatt taaagatttt ttcttattgt tctttcttta
    13981 attcgagcgg ctttaacatc cgcctgatga atcaaccccg agtctttttg caaaatctct
    14041 cgcaggggga gtgagaaata ctcacgcata aaccggaata tatctcgctg agtcaggcca
    14101 atattcattg aagaaaaata aagcccaatt aaatctttgt cacgccagcg aaggggaacg
    14161 tgctgacgta tctgcgcgcg atgcaggtcg attacggaga tttttaaatc ctcttcgcga
    14221 ccagtgaaag gtaaatgcag aagaaagtgg caaatataac agtcgcgatg gttaattccc
    14281 ccggcgtgca ttttacgtac catagtcgca acacgcttaa taatcatcca cttcacctgc
    14341 gcgtccggtg gattaacagc ccagtcaaca cagtagtctt caaggctaat ggtaggcgtt
    14401 aaatcttcgg tgataataaa tgatgttctg gttagcgggt ttacgccttt ttcaccaaaa
    14461 ccaacgccgt gcatcgtatc aacgcccagc tcatgtagac gatgaatggc gtgccattct
    14521 ctgtcagcgc ccagaacagg catacgtaac gaaatcaggt tcttcacaat ttctttcagc
    14581 gaagtgcctt tatgccactt caggaagtag cttttgccgt ccagctcaaa ccgcaatgtt
    14641 cgacgcatct ccagttctct gaacacttcg ccctgtaacg ttttcacttc ctcaaaagca
    14701 tctttaccgc gccatagtgt ggttaacggc gctttcagct caaccatcta aatcacctgt
    14761 gataatatct gcggccttct ccggtaagct gtataaatcc tgggtatcag cataataccg
    14821 cgcattttca gcccaggcgc tgcgtaagga aggctgtgtc agcgctctga gtaaaacctc
    14881 atttagcgca tcctggcgga aaggttccgt catcgcttcg ccacagtttg catccacaat
    14941 ataatgtgca taaccgcaca ccgcggttgt caacaccggc aaaccagcag taatggcttc
    15001 cagcaaaaca ataccagcag cttcctgata ggctggatgc agtaaaaggt cggctgccgc
    15061 cattaactcc gcaatatcat tacgtccgga gaaaaaatgc acattcgtgc cgacgccgct
    15121 tctttcagcc agtgctgcaa acttcttcgg cttatcctgc ccgacaacac agagcaccgt
    15181 attttgccgt aaagattcgg gtagcgatgc cagcgcttca atagagcgat ccacaccttt
    15241 acgggtaaag tcagacccta cttgcaacag taatttttgc tgttctgaga taccattttt
    15301 ctgacgataa atttgacgac tgttcgggat ctgttggcta tattttctat ccgggtaaat
    15361 ccccggagga agaatatgaa aacgctccgc ttcagtctga taatgttttt ggaagtcagc
    15421 aatctgctta ttcgtcagca ttaatagttg cgtctgcttg ccgtgttcaa acgtggcgcg
    15481 ttcaaaagca gcataatgcc gatagcgtga tgtcaggcga tagaaaaatc ctttttcctg
    15541 tgcgactttt tcggcgtaac acacgtctgc ggcgtaatac acatcaaggc ctggcatctt
    15601 attgaaccca accacccgat cgacaggatg gtcgcgcaaa tggtgttgca cccaggcata
    15661 atattctgcg ttacgaccgt ggttcgtccg ggatttaacc ggcacgcgga ttaattcaaa
    15721 gttatccggg cattcccctt cccatgactg agtataaaca cgaacctgat gacctcgcgc
    15781 cgccacggtt tgagcaatat gcataaaatc acgctgcaga ccgccaaaag gaaaatattt
    15841 atataagcaa aaggcaactc tcatagcagg ctgtccaaat ctatggggcg tgcctcatgc
    15901 ggcagcattt tttccgtcgc ggcgataaca tcttcagccg gaatcacgga aaggtatttt
    15961 ttattacgat caagctcatg ccgttcaggc atcggctgat aatttcctgc ccaaaactga
    16021 atgatgtcgt cggtccaggg acgccagaat acatgatccg tcgcgccaaa aagacaaatg
    16081 accggcgttt tgactgctgc ggcaatatga ccgggggccg aatcaacgcc gataaagaga
    16141 tccgcatggt caatcaatgc gcccaattca ggaaagcgag ttttacccgc cagaccagta
    16201 accggttttg tctcacagcc gcatgcaata gcatccacgc aggccatctc gtctgcggcc
    16261 gggcctgacg tcagtacaac ttgataaccg cggcgctgca cggcatcaat aacctgcgag
    16321 aatttatcat tatcccagca cttaaatagc tgccgtgccg taggctgaat aacaacatat
    16381 tgtcgggtca caccaagttg tttgagctgt tgtcgcatgt tttcccaatg ttccgggcga
    16441 tagctcatgg tggtttccgt gacatactgt tttagcgcta acggctttag cgcggataat
    16501 gtgcgctcaa cagcatgttc tcccgcataa ggtactaaat gtgtaaagct ttttttccat
    16561 aaagcagact gacgattacc gaaatcttgc gagattttta tttttgcgtt taaaaaacgc
    16621 acaataagcg ccacgctcca ctgatcggtg agattgacga ccagatcata cgagttagca
    16681 cgcaattttt tgattaacga tagcgcgttt ttgatcttct cttttgttcc tgcgcctttg
    16741 ttactgatgc cgtagagtgc attaatctcc ggattttccg acaatatcgg tatggtgttc
    16801 tggtaaagaa gcacatcgat ttttgcatcg ggataattct gcttcagcgt gctgatgaca
    16861 ggagtggtaa gtaacatgtc tccatgaaaa cgcattttta taatcagaat tcttcgaaat
    16921 ggcttttcca caagcgactc tttggttgaa attgtccgga taaataagca gaaaaaagca
    16981 cgctaccgcc ccaggcttca cagcaacccg atggctaata ccgcactcat tttagatgcg
    17041 ctagtgtaac acttctttcg cagcaatccg atacgaataa tttttataca caatcatttt
    17101 tttaattata aattcaaaga gataataatt tatccccctc ttgtgaatgg tcattcccat
    17161 tgtctggggc gacaagggcg gcaaatttca atggattgcg taaaaatgca aaaataatgg
    17221 ggttcagcgc ctggaatcct cccttctgag ccaatttggc gcaaaaatgg gaaaagtaat
    17281 ggtaaagccc aggctaaata catagaatcc ccagcacatc cataagtcag ctatttacta
    17341 tgctcgaatt gctttacacc gctcttctct accttattca gcctctgatc tggatacggc
    17401 tttgggtgcg tggacgtaaa gcgccggcct atcgtaagcg ctggggtgaa cgctacggat
    17461 tctaccgccg tccgttgaaa ccgggcggaa tcatgctgca ttccgtctcg gtgggcgaaa
    17521 ctctggcggc catcccattg gtccgcgctc tacgtcatcg ctatcccgat ctgcctatta
    17581 ccgtaacgac catgacgccg accggctcgg agcgcgtcca gtccgccttt ggcaacgatg
    17641 ttcagcacgt ttacttacct tatgatttgc ccgatgcgct caatcgtttc ctcaataaga
    17701 ttgatcctaa gctggtattg atcatggaga ctgagctctg gccaaatctg attgctgcgc
    17761 tgcacaaacg tcatattccg ctggttatcg ctaatgcgcg gctttccgcc cgctccgccg
    17821 cgggttatgc gaagcttggc aagtttgtcc gtacgctcct gcgccgtatc accctgattg
    17881 ccgcgcaaaa cgaagaagat ggcgaacgct ttgtggcatt gggcgcgaag aacaatcagg
    17941 tcacggtcac cggcagtctg aaatttgata tttcagttac accgcaactg gcggctaaag
    18001 ccgttacgct acgtagccag tgggcgccgc accgtccggt ctggattgcc accagcaccc
    18061 acgatggcga agagagtatc gttatcgccg ctcaccaggc gttattacat caattcccga
    18121 atttattact gattctggtg ccccgccatc cggagcgttt cccggatgct atcaatcttg
    18181 tgcgtcaggc agggttaagc tacatcactc gctcttcggg cgaagtgccg tccgccagca
    18241 cccaggtcgt ggtaggcgat accatgggcg aattaatgtt gctctatggc attgccgatc
    18301 tcgcctttgt tggtggttcg ctggttgaac gcggcggtca caacccgctg gaagccgccg
    18361 ctcatgcgat tccggtactg atgggtccgc atacctttaa ctttaaagat atttgcgccc
    18421 gtctggagca ggcgagcggg cttatcacga ttaccgatgc ggctacgctg gcaaaagaag
    18481 tttcctcttt actgaccgac gctgattatc gtaatttcta cggacgtcac gcagttgaag
    18541 tgctgtatca aaatcagggc gcgctccagc gtctgctgca actgctggaa ccttatctgc
    18601 caccgaaaac gcattgaggg ctgtcatgca aaaacgggcg atttatccag gcacgtttga
    18661 tccgattact aacggtcatc tcgatattgt gacgcgcgca acgcagatgt tcgaccatgt
    18721 cattctggcc atcgccgcca gccccggcaa gaaacccatg ttcaccctga acgaacgtgt
    18781 ggcgctggcg caaaaagcga ccgcacacct gggtaacgta gaggtggtgg gttttagcga
    18841 cctgatggcc aatttcgccc gcgacagaca ggcgaatatc ctgattcgtg gtctgcgcgc
    18901 ggtggcggat tttgaatatg aaatgcagtt ggcgcatatg aatcgccatc tgatgccgca
    18961 actggaaagc gttttcctga tgccgtccaa agagtggtcg tttatttcat cgtcgctggt
    19021 caaagaagtg gcgcgccatc agggcgatgt gacccacttt ctgcccgaca atgtgcatca
    19081 ggcgctaatg gataagttga aataagtttc cttccttgcc gggcctggca ttttacttct
    19141 gacagtgacg gcaatagaac gtcgcgcgct gtgcgtgttt cgttgcgact atcggcgtac
    19201 cgcatacccg acacggctcg cctttgcgcc cgtacacctg caactcctgg gcaaaatagc
    19261 ccggcttccc atcgctttgc agaaaatcct tcagcgttgt cccgccttgt tcaatagagc
    19321 gcagcaaaac ggctttaatc acccgcgcca gcaggtcgca ctcctctgtc gagagtgacg
    19381 acgccaggcg gtcagggtga ataccagcgg caaacagcga ctcgctggcg tagatattcc
    19441 ccacgccgac caccagcttg ttatccatca gccagggttt aatcgccgtc ttcttcttcg
    19501 cgcatttctg ttgcaaatat tcgccattaa actcatcgct tagcggctcc ggtcccagat
    19561 gcgccagtac gttatgtcct tccagctctt tggtccataa ccaggcgcca aagcggcgag
    19621 gatcggtata acgtagaatt ttgccattgc tcatcaccaa atcgacatgg tcgtgctttt
    19681 ccgccggcag cgcttccgac agtatccgca agcttcccga catccccagg tgaataatta
    19741 tccagccgtc aggcaactcc agcagtagat atttagcacg acgctgaacg ctaaggacgg
    19801 gtgtgtcgct cagacgataa atttcgtctg aaaccggcca gcgcagacga ccgttacgga
    19861 tatgggcgtg caggatagta gcgccaacta aatgaggttc aataccccgg cggctggttt
    19921 caacttcggg taattcaggc ataacgtctc cggctgtgtg gcaggtctca ttaatatggg
    19981 gacggccaga aaacaaaaaa ccccgccgaa gcgaggtttt tgttacatca aagcgagaat
    20041 tatttgattt tcgcttcttt gtagatcacg tgctgacgga caactggatc gaattttttc
    20101 agttccagtt tttccggctt agtacgtttg ttcttcgtag tggtatagaa gtgaccagta
    20161 ccagcagaag aaaccagctt gattttctca cgaatacctt tagccatgat ttatttcctc
    20221 ttagtactta gtacttttcg ccacgggcac gcagttcaga cagaactgtt tcgatgcctt
    20281 ttttatcgat gatacgcata cctttagcag atacacgcag ggtgacaaaa cgcttctcgc
    20341 tctcaaccca gaaacggtga gagtgcaggt taggcaggaa acggcgttta gtcgcgttca
    20401 gtgcgtggga acggttgtta ccggtcaccg gacgcttgcc agtaacttgg cagactcggg
    20461 acatgtctat tctccaaaaa tcaaattagc tcgagcttcg tatggggtat cggcgcctcg
    20521 tcaggcttta cagcctggtc atcgcgcagt tctattgaac tctcgattgc caggcccaaa
    20581 tgccaaaccc gagattctca aaggtggcgt agtatacgct gacccggcga tatgctcaag
    20641 tcccgaacag acaaagatcc cgatggatcg cgcaaagaat cttaaatcca gccgcgttcg
    20701 gcaaaagaaa cgtactctcc gcgcccaatt atcaggtgat cgagcacccg gatatccata
    20761 aactggcaac actttatcac gcgctcagtg ataagtttat ctgctttact tggctctgcg
    20821 cagcctgaag ggtgattatg cgccagaatg accgctgaag cattgagttt aatcgcttcc
    20881 cgaacaatct cacgcggatg cacctctacg tggttaagcg tgccggaaaa caggcggctg
    20941 tgctgaagca cccggtgctg ggcatctagg aagatcacca gaaagatctc acgctcttcg
    21001 cccgtcagtt ggctttgcag aaattcccgc gtcatttccg gactcagcaa cgcactttcc
    21061 tcattcatgc gcacgctgta atagcgcctt gccagctcag caatgccttt caactgcgcg
    21121 aatttcgcca ggccgatgcc gtttacgccg cgaaactgcg caaagtccgc cgacagcagg
    21181 ccatacagcg acccaaagtg ctgcaatatc tcttttgcca acgtcataac atcttttccc
    21241 ggcgtgccgg tacgtaaaaa aagcgccagc agttccacgt cgctgaggga agcaatgccg
    21301 gatctgagca ttttttcacg cggcaataat tcgtccaacg tatccatacg cgcacctcct
    21361 tttttaagga agcggcatag tggcacagcc tttgggagag atcgacgccc cgattttgtt
    21421 cttgcgtagc gcctcgcaaa gtggagcgca ggcaaagaca cgacgccgta gagattgtga
    21481 taaaatagcc gcctttcaaa gtcacccaac aggaaagaca tgatgagcct ggccggtaaa
    21541 aaaattgttc tcggcgttag cggcggtatc gctgcgtata aaacgccgga gctggtgcgc
    21601 cgtttacgtg agcgcggcgc tgacgtgcgc gtggcaatga ccgaggcggc aaaagccttt
    21661 attacccccc tgagcttaca ggccgtgtcg ggctatcccg tatccgacag tctgcttgac
    21721 cctgccgccg aagctgcgat ggggcatatc gagttgggga aatgggccga cctggtgatt
    21781 cttgcccccg cgaccgccga tctgatcgcc cgtgtagcat cgggtatggc taatgattta
    21841 gtctccacca tctgcctggc gacgccagcc ccggtggccg ttcttccggc catgaaccaa
    21901 cagatgtacc gcgctgccgc cacgcaacat aatctggagg tgctcgcctc tcgcggcctg
    21961 ttcatttggg ggccggatag cggcagtcag gcgtgcggcg atgtaggccc aggccgaatg
    22021 ctggacccat tagctatcgt tgataaggcc gccgcgcatt tcgctgccgt caacgatctg
    22081 cgacatctta atatcatgat tacggcaggc ccgacgcgcg aaccgctcga cccggtgcgt
    22141 tatatttcca actacagctc cggtaaaatg ggcttcgcta ttgcggcggc cgcagcgcgt
    22201 cgcggcgcaa atgtcacgct ggtctccggt cccgtttcgt taccgatgcc gccttttgta
    22261 aaacgggttg atgtcataac cgcgctggac atggaagccg ctgttcaggc cgccgttcaa
    22321 cagcagcata ttttcattag ctgcgccgcc gtggctgact atcgcgcaga gactattgcc
    22381 agtgaaaaaa tcaaaaaaca ggcggcgcaa agtgatgaat taataataaa aatggtcaaa
    22441 aacccggaca ttgtcgccgg ggtggccgca ctcagtgaca atcgccccta cgttgttggg
    22501 tttgccgcgg aaacgaataa tgtggaagaa tacgcccggc aaaaacgtac ccgtaagaac
    22561 cttgacctga tttgtgcaaa tgatgtttct ctttcaaatc agggatttaa tagcgataaa
    22621 aacgctttac accttttctg gcaggatgga gataaagtct taccgcttga gcgaaaagaa
    22681 ctcctgggcc aattattact cgacgagatc gtgacccgtt atgatgaaaa aaatcgacgt
    22741 taagattctg gacccgcgtg ttggtcagca gtttccgctg ccgacttatg ctacttctgg
    22801 ttctgccggg cttgacctgc gcgcctgtct cgacgacgcc gtagaactgg cgcctggcgc
    22861 aacgacgttg gtgcctaccg gactggccat tcatatcgcc gatccatcat tggcggcagt
    22921 catgttgccg cgttctggcc tgggccataa acatggtatc gtgctgggca acctggtcgg
    22981 gctgattgat tccgattatc aggggcaact gatggtttcg atctggaacc gtggtcagga
    23041 cagttttacc attgaaccgg gcgaacgtat cgcgcaaatg gtgtttgttc cggtcgttca
    23101 ggccgaattt aatctggtgg aagcatttga cgccaccgaa cgtggcgagg gcggcttcgg
    23161 tcattctggc cgtaagtaaa ttttacgcat ccccataacg tcataatact gccgcaagcg
    23221 ctgagtttgc ggttatagcg tgggtgctcg cctggcaagt gcttattttc aggggtattt
    23281 tgtaacatgg cagaaaaaca aactgcgaaa aggaatcgtc gcgaagaaat acttcagtca
    23341 ctggcgctga tgcttgaatc cagcgatgga agccaacgca tcacgacggc aaaactggcg
    23401 gcctcggtcg gcgtttccga agcggcgcta taccgccatt ttcccagcaa gacccgcatg
    23461 ttcgatagcc tgattgagtt tatcgaagat agtctgatta cccgtatcaa tctgatttta
    23521 aaagatgaaa aagacaccag cacgcgtttg cgcctgattg tgttactgat tctgggtttt
    23581 ggcgaacgca accctggcct gacgcgcatt cttaccgggc atgcgctgat gtttgaacag
    23641 gatcgcctgc aggggcgcat taatcagctt tttgaacgca tcgaagcgca gctccgccag
    23701 gtgctacgag aaaaaagaat gcgtgaaggc gaaggctaca cgacggataa aaatctgctg
    23761 gcaagccagc tgttagcctt ctgtgaaggt atgctttcac ggttcgtgcg tagcgaattt
    23821 aaataccgcc caacggacga tttcgacgcc cgctggccgc tcattgccgc gcagttgcag
    23881 taacgctgac tggatagtgg ctcacgcctt atccaggcga cagaaatata ggcccggtaa
    23941 agcgccaccg ggcaattcgc ttacacgcca aattcttccc ggtatgctcg cacagccgcc
    24001 agatgctcag ccatatcagg tttttcttcc agataggcaa tcaggtcttt cagcgtaatg
    24061 atggagataa ccttacaacc atagtcgcgc tccacttcct gaatcgcgga aatctcgccg
    24121 cggccacgtt cctgacgatc cagcgaaatc agtacgccag ccagtgtagc cctgtgcgcc
    24181 tgaataatct ccatcgactc gcgaatcgcc gtacctgcgg taatcacgtc atccaccagc
    24241 atcacgcggc cctgtagcgc gctgcccacc agactcccgc cttcgccatg atcttttgcc
    24301 tctttgcggt taaagcagta cggcaggtct ttatcgtgat gttccgccag cgcaaccgcc
    24361 gtcgtcgtcg cgatcggaat acctttgtac gcggggccaa acagcagatc aaattcaata
    24421 ccggaatcca ccagcgcttc ggcataaaaa cggcctaaca acgccaggtc gcgcccggta
    24481 ttaaacagcc cggcgttgaa gaaatagggg cttttgcgcc cggatttcag cgtaaactcg
    24541 ccaaacttta gtacctgctt gttaagcgca aactcaataa actggcgctg atacggtttc
    24601 atggattcgc tccttttctt actttcatca tttacgaaat ttacggacaa aaaaaaggcg
    24661 acttttcagt cgccttaaaa tcaattttct aacgccgcct tctgcgtcgc cacaatggat
    24721 tcaattcccc ctcgggccag cgccaacaaa gtgagaagtt cttcatggct gaacggctcg
    24781 ccttccgcgg taccctgaac ttcaataatg cggccgtctt cagtcatcac gacgttcatg
    24841 tcggtttctg cggcggaatc ttcaacatat tccagatcgc agatcgcttc gccgttaacg
    24901 atgcctacgg aaaccgccgc caccatgcct ttcatcggat tggttttcag cttaccgttg
    24961 gcaaccaatt tattcagcgc atccgccaac gccacgcagg caccggtaat agacgctgta
    25021 cgcgtaccgc catctgcctg gattacatcg cagtccagcg taatggtaaa ttcgccgagc
    25081 gttttcagat cgaccgccgc acgcagcgca cgcgcgatca aacgctgaat ttccatagta
    25141 cgaccgccct gcttaccctt tgccgcttcg cgcgcattac gggtatgggt agcgcgaggt
    25201 aacatgccat actctgcggt gatccacccc tggccttgtc ctttcagaaa acgtggaacg
    25261 ccttcttcaa tggaggcagt gcacaacact ttggtatctc caaattcgac cagtaccgag
    25321 ccttcagcgt gttttgtata gttacgggtc agggttacgg gacgcacctg attagcgcta
    25381 cggcctgctg gacgcatatt gagatctccg gcttaaaacg aatgtggctg cgcattatac
    25441 ggacttccga tggttattcc tatcctgaca aggcatggat agctataatc ccctcatctc
    25501 tcctttaaaa acgggaacat ctatgatccg cagtatgacc gcctacgccc ggcgtgaaat
    25561 caagggtgaa tggggtagcg cgacctggga aatgcgctcg gtaaaccagc gttatctgga
    25621 aacttacttt cgtctgccgg aacagttccg tagtcttgaa cccgtcgtgc gcgaacgcat
    25681 tcgtacacgc ctgacgcgcg gcaaagtcga atgtatgctg cgttttgaac ccgatgccag
    25741 cgcgcaaggc gagcttattc tgaatgaaaa gctcgcgaaa caattagtta gcgccgcaaa
    25801 ctgggtcaaa atgcagagcg acgaagggga aatcaatccg gttgatattt tgcgctggcc
    25861 aggtgtcatg gcggcgcaag agcaggatct ggacgcgatt gccgcagaaa ttttagccgc
    25921 actggacggt acgctggatg actttatcgt cgcgcgcgaa acggaaggcc aggcgctgaa
    25981 agcgctgatt gaacaacgtc tggaaggcgt cagcgccgaa gtagcgaaag tccgcgcgca
    26041 tatgccggaa atcctgcaat ggcagcgtga acgcctggtc gcgaagctgg aagatgctca
    26101 ggttcagttg gaaaacaacc gtctggagca agagctggtg atgatggcgc agcgcattga
    26161 tgtggcggaa gagctggatc gtctcgaagc gcacgtcaaa gagacttaca acattctgaa
    26221 gaaaaaagag gcggtaggtc gccgtctgga cttcatgatg caagaattta accgtgagtc
    26281 gaacaccctg gcctctaaat ccatcaacgc tgatgtaact aactccgcta ttgaattaaa
    26341 agtgttgatc gagcaaatgc gcgagcagat ccagaatatt gaataattct ggcgctcaat
    26401 atgtcacaga gtccgcctta tgcgggctct cgcgtttatc ggtagtacgt ttttaatttc
    26461 cggcgaatag cgtcgataag gcgtcgcttc cactctaccg tcgaagcccg atactgcata
    26521 aaaatagcgc cttccgcctg ctccccggca agcggcagga caaaaagacc gcgcttatcg
    26581 gataaatttt cataccaggg gcgcggtaca atcgccatta gcggcgccga ctggacagca
    26641 ggcgcaagtt gactgtaatc atgacaaaca aacgccaacg gacgttcaaa cccggcacga
    26701 gcctgctgcc tgtccagttc gttgttctct tttgtccacg gcaaacagta aatgtgttga
    26761 taatgctgca gatcagcaaa attcaacgct gcggcattct ccagacgtga acgcaatggc
    26821 gcgccataaa ccgcgatcaa acgcgtcgtc cccacccgct cgtaatgcag agcgctgacc
    26881 tgcttttgat ggtcgccaat tgccagcacc aaatcaaccg agctatccaa cagttcatca
    26941 cgccagggtc ggcgggcaaa aggaaggcac tcgatcaccg cctgatgaag atgacctttc
    27001 tctgcgagaa cgggcgtaag cagcgcgttc aatgcgggag gaagtaccac ccggaaacaa
    27061 cgggagccgt tctctttatc gccaaacagc tcctcattaa gcgaaacaaa cacaggcgcc
    27121 aacttgtcac gcagcgcctg cgcataaggc gtagcaatct ggcggttccc ctcccgtcga
    27181 aacaacggat cgtttagcgc atcgcgcaat ctcattagcg catgactcac cgcagaaggc
    27241 gacaaagcca gcttttgcgc cgttttcccc gtagagctcg tctccagcag cacatacagt
    27301 acttttaaca ggttcatatc catttgcagc aagttcatta aacgtctctc ttattgaacc
    27361 tgactaaatt actgccaggt atactgcggg cgcttcaatc aggagaacat tatgaatcgc
    27421 tatgtattat tctttgtatg tatattttca acatcagcac ttcctgccat ggcggcatta
    27481 gatccttcac aaccgttatc acccgcgcct ccgttatcac tgtttaaagc gtgggctaag
    27541 cctatgaagc cgtttcaaat cacagaaggc gtgtggtatg tcggtacgga aaatctctct
    27601 tctattctgc tgaccactcc ggcagggcat attcttattg atgcggggct ggatgaaagc
    27661 gcaccgcaaa ttaaagcgaa tattgaagcg gcaggatttc gcttcactga cgtgcgctat
    27721 ctgttgagca gccatgcgcg gctggatcaa gcggggggca tggcacgttt gaaagcgtgg
    27781 agcggcgcac aattggtcgc cagtcaaccc aacgccgatc agatggcgag gggtggacga
    27841 caggattttg cgcttggcga tgcgctcccc ttcccgctcg tcaccactga taaaattatc
    27901 cacaaccagg aaagcatcag cctcggaggg gtaaccgtga cagcactatt cacgcctgga
    27961 catctgcccg gctcaacctc ctggcgcgta acgctccgca acggcaagac gctaatttac
    28021 gcagatagtc tcgccacacc tgactatctg ctgattaaca acaaaaatta ccctgacctg
    28081 gttactgata ttcagagcag ctttaaaaca ctggccgccc agcatgttga tatctttatt
    28141 gccaacaaag gtgaccgctt cgggctactg gagaaacgac agcaacttcg caacggcgat
    28201 acacaggcat tctttgattc caatggcttg caacagtatg tggaacgctc gcgtcagcgc
    28261 ttcatcacac aacttaccgc acagcagcca caatgaaatg actcaccggc ggcgcgtcca
    28321 gggcgccgtt caggtaattt atctaagtca aaacagaaaa acctcg
//
LOCUS       DAGWFR010000446        16110 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.guided.084, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000446 DAGWFR010000000
VERSION     DAGWFR010000446.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 16110)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16110)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16110
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.guided.084"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(171..938)
                     /locus_tag="MOX77_004931"
     CDS             complement(171..938)
                     /locus_tag="MOX77_004931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HCA3360279.1"
                     /translation="MSGLKITLLQQPLVWMDGLANLRHFDRQLELVSGRDVIVLPEMF
                     TTGFAMEAANNSLSQDSVITWMQAKARQTDALIAGSAALQTERGAVNRFLLVEPEGKV
                     HLYDKRHLFRMADEHQHYAAGDKRIIVQWRGWRILPLICYDLRFPIWSRNRNDYDLAL
                     YVANWPAPRSLHWQTLLTARAIENQAYVAGCNRVGTDGNGLHYRGDSRIINPQGDIIA
                     TAEPHQATRIDADLSLVALQDYREKFPAWRDADPFTL"
     gene            complement(1047..3491)
                     /gene="fadE"
                     /locus_tag="MOX77_004932"
     CDS             complement(1047..3491)
                     /gene="fadE"
                     /locus_tag="MOX77_004932"
                     /EC_number="1.3.8.7"
                     /EC_number="1.3.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase FadE"
                     /protein_id="HCA3360280.1"
                     /translation="MMILSIIATVVLLGALFYHRVSLFLSSLILLAWTAALGVAGLWS
                     IWLLVPLAIILVPFNLTPMRKSMISAPVFRGFRKVMPPMSRTEKEAIDAGTTWWEGDL
                     FQGKPDWKKLHNYPQPQLTAEEQAFLDGPVEEACRMANDFQITHELADLPPELWAYLK
                     EHRFFAMIIKKEYGGLEFSAYVQSRVLQKLSGVSGILAITVGVPNSLGPGELLQHYGT
                     EEQKNHYLPRLARGQEIPCFALTSPEAGSDAGAIPDTGVVCMGEWQGQQVLGMRLTWN
                     KRYITLAPIATVLGLAFKLSDPDRLLGGEEELGITCALIPTSTPGVEIGRRHFPLNVP
                     FQNGPTRGNDIFVPIDYIIGGPKMAGQGWRMLVECLSVGRGITLPSNSTGGVKSVALA
                     TGAYAHIRRQFKISIGKMEGIEEPLARIAGNAYVMDAAASLITYGIMLGEKPAVLSAI
                     VKYHCTHRGQQSIIDAMDITGGKGIMLGESNFLARAYQGAPIAITVEGANILTRSMMI
                     FGQGAIRCHPYVLEEMAAAQNNDVNAFDKLLFKHIGHVGSNTVRSFWLGLTRGLTSHT
                     PTGDATKRYYQHLNRLSANLALLSDVSMAVLGGSLKRRERISTRLGDVLSQLYLASAV
                     LKRYDDEGRHEADLPLVHWGVQDALYRAEQAMDDLLQNFPNRVVAGLLTAMIFPTGRH
                     YLAPSDKLDHAVAKILQVPNATRSRIGRGQYLTPAEHNPVGLLEEALRDVIAADPIHQ
                     RICKELGKNLPFTRLDELARNALAKGLIDKDEAAILAKAEESRLRSINVDDFEPEALA
                     TKPVKLPEKVRKVEAA"
     gene            3731..4309
                     /gene="lpcA"
                     /locus_tag="MOX77_004933"
     CDS             3731..4309
                     /gene="lpcA"
                     /locus_tag="MOX77_004933"
                     /EC_number="5.3.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-sedoheptulose 7-phosphate isomerase"
                     /protein_id="HCA3360281.1"
                     /translation="MYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAG
                     GKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAISDVSHISCVSNDFGYDYIFS
                     RYVEAVGREGDVLLGISTSGNSGNVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEI
                     RVPHFGYADRIQEIHIKVIHILIQLIEKEMVK"
     gene            4473..5240
                     /locus_tag="MOX77_004934"
     CDS             4473..5240
                     /locus_tag="MOX77_004934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II glutamine amidotransferase"
                     /protein_id="HCA3360282.1"
                     /translation="MCELLGMSANVPMDICFSFTGLVQRGGGTGPHKDGWGITFYEGK
                     GCRTFKDPQPSYHSPIAKLVQNYPIKSCSVIAHIRQANRGEVALENTHPFTRELWGRN
                     WTYAHNGQLNGYKSLETGNFRPVGETDSEKAFCWLLHKLTQRYPRTPGNMTAVFKYIA
                     TLATVLREKGVFNMLLSDGRYVMAFCSTHLHWITRRAPFGVATLVDQDMEIDFSSQTT
                     PNDVVTVIATQPLTGNETWQKIMPGEWALFCLGERII"
     gene            complement(5211..5951)
                     /locus_tag="MOX77_004935"
     CDS             complement(5211..5951)
                     /locus_tag="MOX77_004935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase"
                     /protein_id="HCA3360283.1"
                     /translation="MRKIAFFLAMLLMPCVSFAGLLSSSSPVTPVSKEYKQQLMGSPV
                     YIQIFKEERTLDLYVKMGEQYQLLDSYKICNYSGGLGPKRRQGDFKSPEGFYSVQRNQ
                     LKPDSRFYKAINIGFPNAYDRAHGYDGKYLMIHGACVSVGCYAMTDSGIDEIFQFVTA
                     ALVFGQPSVQVSIYPFRMTDANMQRHKYSYYKDFWAQLKPGYDYFEQTHKPPTVSIVD
                     GRYVVSKPLSHEVVQPQLASNYTLSEAK"
     gene            6201..7256
                     /gene="dinB"
                     /locus_tag="MOX77_004936"
     CDS             6201..7256
                     /gene="dinB"
                     /locus_tag="MOX77_004936"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HCA3360284.1"
                     /translation="MRKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVISTA
                     NYPARQFGVRSAMPTAMALKLCPHLTLLPGRFDAYKEASRHVRDIFSRYTSLIEPLSL
                     DEAWLDVTDSPHCYGSATLIAREIRQTIFNELQLTASAGVAPVKFLAKIASDLNKPNG
                     QYVITPADVPDFLKTLPLAKIPGVGKVSAAKLENMGLRTCGDIQQCDLAMLLKRFGKF
                     GRVLWERSQGIDERDVNSERLRKSVGVERTLAEDIHEWSDCEAIIEHLYPELERRLAI
                     VKPDLLIARQGVKLKFNDFQQTTQEHVWPQLNKEDLITTARKTWDERRGERGVRLVGL
                     HVTLLDPQLERQLVLGL"
     gene            7475..8614
                     /locus_tag="MOX77_004937"
     CDS             7475..8614
                     /locus_tag="MOX77_004937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006895405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA ligase RtcB family protein"
                     /protein_id="HCA3360285.1"
                     /translation="MGNYIRPLSDVVFSIASDNLWIEDSAIQQLYTTAKLTGMKRVIG
                     MPDLHPGRGYPIGAAFFSRGRFYPALVGNDIGCGMALWQTDILGRKYNADKLEKRLAS
                     LPDVADAQWLEENVPAVMQHHSWRSALGSIGGGNHFAELQQVDRIVDADSFALSGLQK
                     AQLLLLVHSGSRGLGQAILRRHVEAFSHNGLPEDSDDARHYLAEHDDALAFARSNRAL
                     IARRILQQLRAEGEPRLDVAHNFVEPCTVAGEAGWLHRKGATPDGQGLVIIPGSRGDY
                     SWLVKPVVSEESLFSLAHGAGRKWMRTECKDRLSAKFTPRQLCRTGMGSRVICRDRQL
                     IYEEAPQAYKSIDSVVDCLADAGLITPVACLRPVLTLKTSGEKSA"
     gene            8611..9225
                     /locus_tag="MOX77_004938"
     CDS             8611..9225
                     /locus_tag="MOX77_004938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor H"
                     /protein_id="HCA3360286.1"
                     /translation="MILLQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEP
                     GRLPDTLRSALVSLDGEKAMAFSERWCGTLLWICTSPYRPHHGRKNWYVGIGRFSADE
                     HIQSDEIRFETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLL
                     IAWRLEQQRQNECAALKSERRLFHHQIERGNPLRIFKGMAFTPQ"
     gene            complement(9380..10837)
                     /gene="pepD"
                     /locus_tag="MOX77_004939"
     CDS             complement(9380..10837)
                     /gene="pepD"
                     /locus_tag="MOX77_004939"
                     /EC_number="3.4.13.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytosol nonspecific dipeptidase"
                     /protein_id="HCA3360287.1"
                     /translation="MSELSQLSPQPLWDIFAKICSIPHPSYHEEQLAEHIVSWAKEKG
                     LYVDRDQVGNILIRKPATAGMENRKPVVLQAHLDMVPQKNSDTVHDFTTDPIRPYIDG
                     EWVKARGTTLGADNGIGMASALAVLADDNVVHGPLEVLLTMTEEAGMDGAFGLQSGWL
                     QADILINTDSEEEGEIYMGCAGGIDFTSNLPLTREAVPAGFACFKLTLKGLKGGHSGG
                     EIHLGLGNANKLLARFLAGHAEELDLRLIDFNGGTLRNAIPREAFATLAVATDNVGAL
                     KTLVNAYQDILKNELAEKEKNLTLQLNEVASDKAALTAPSRDTFVRLLNATPNGVIRN
                     SDVAKGVVETSLNVGVVTMSDANVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEA
                     KGSYPGWQPDANSPVMHLVRETYQRLFNKTPNIQIIHAGLECGLFKKPYPDMDMVSIG
                     PTITGPHSPDEQVHIESVGHYWTLLTELLKAIPAK"
     gene            11086..11544
                     /gene="gpt"
                     /locus_tag="MOX77_004940"
     CDS             11086..11544
                     /gene="gpt"
                     /locus_tag="MOX77_004940"
                     /EC_number="2.4.2.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine phosphoribosyltransferase"
                     /protein_id="HCA3360288.1"
                     /translation="MSEKYVVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGA
                     LLARELGIRHVDTVCISSYDHDNQRELKVLKRAEGDGEGFIVIDDLVDTGGTAVAIRE
                     MYPKAHFVTIFAKPAGRPLVDDYVIDIPQNTWIEQPWDMGVVFVPPISGR"
     gene            11633..12877
                     /gene="frsA"
                     /locus_tag="MOX77_004941"
     CDS             11633..12877
                     /gene="frsA"
                     /locus_tag="MOX77_004941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase FrsA"
                     /protein_id="HCA3360289.1"
                     /translation="MTQANLSETLFKPRFKHTETSTLVRRFNRGSQPPMQSALDGKNV
                     PHWYRMINRLMWIWRGVDPREILDVQARIVMSDAERTDDDLYDTVIGYRGGNWIYEWA
                     KQAMDWQQKACQEQDAMRSGRYWLHASTLYNIAAYPHLKGDELAEQAQALANRAYEEA
                     AQRLPGSLREMEFAVPGGSPVTAFLHMPKGDGPFPTVLMCGGLDAMQIDYYTLYERYF
                     APRGIAMLTLDMPSVGFSSKWKLTQDSSLLHQHVLKALPNVPWVDHTRVAAFGFRFGA
                     NVAVRLAYLEAPRLKAVACLGPVVHALLSDPQRQSTVPEMYLDVLASRLGMHDASDEA
                     LRVELNRYSLKVQGLLGRRCPTPMLSGFWKNDPFSPEEESRLITTSSSDGKLIEIPFN
                     PVYRNFDHALQEITDWINHRLC"
     gene            12935..13336
                     /gene="crl"
                     /locus_tag="MOX77_004942"
     CDS             12935..13336
                     /gene="crl"
                     /locus_tag="MOX77_004942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma factor-binding protein Crl"
                     /protein_id="HCA3360290.1"
                     /translation="MTLPSGHPKSRLIKKFTALGPYIREGQCEDNRFFFDCLAVCVNV
                     KPAPEKREFWGWWMELEAQEKRFTYRYQFGLFDKEGNWTVVPINETEVVERLEYTLRE
                     FHEKLRDLLISMELALEPSDDFNDEPVKLSA"
     gene            complement(13387..14439)
                     /gene="phoE"
                     /locus_tag="MOX77_004943"
     CDS             complement(13387..14439)
                     /gene="phoE"
                     /locus_tag="MOX77_004943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoporin PhoE"
                     /protein_id="HCA3360291.1"
                     /translation="MNKSTLAIVVSIIASASVHAAEVYNKNGNKLDVYGKVKAMHYMS
                     DYDSKDGDQSYVRFGFKGETQINDQLTGYGRWEAEFAGNKAESDSSQQKTRLAFAGLK
                     LKDIGSFDYGRNLGALYDVEAWTDMFPEFGGDSSAQTDNFMTKRASGLATYRNTDFFG
                     IVDGLDLTLQYQGKNEDRDVKKQNGDGFGTSVSYDFGGSDFAVSGAYTLSDRTREQNL
                     QRRGTGDKAEAWATGVKYDANDIYIATFYSETRNMTPVSGGFANKTQNFEAVIQYQFD
                     FGLRPSLGYVLSKGKDIEGVGSEDLVNYIDVGAIYYFNKNMSAFVDYKINQLDSDNTL
                     GINDDDIVAIGLTYQF"
     gene            14722..15825
                     /gene="proB"
                     /locus_tag="MOX77_004944"
     CDS             14722..15825
                     /gene="proB"
                     /locus_tag="MOX77_004944"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HCA3360292.1"
                     /translation="MSDSQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHR
                     IVIVTSGAIAAGREHLGYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQML
                     LTRADMEDRERFLNARDTLRALLDNHIVPVINENDAVATAEIKVGDNDNLSALAAILA
                     GADKLLLLTDQQGLFTADPRSNPQAELIKDVYGVDDALRSIAGDSVSGLGTGGMSTKL
                     QAADVACRAGIDTIIASGSKPGVIGDVMEGISVGTRFHAQASPLENRKRWIFGAPPAG
                     EITVDEGATAAMLERGSSLLPKGIKSVTGNFSRGEVIRICNLQGRDIAHGVSRYNSDA
                     LRRIAGHHSQQIDAILGYEYGPVAVHRDDMITR"
     gene            15837..>16110
                     /locus_tag="MOX77_004945"
     CDS             15837..>16110
                     /locus_tag="MOX77_004945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-phosphate reductase"
                     /protein_id="HCA3360293.1"
                     /translation="MLEQMGIAAKAASYKLALLSSCEKNRVLEKIADELEAQMESILS
                     ANVQDVEQARANGLSEAMLDRLALTPARLKAIADDVRQVCNLADPAG"
BASE COUNT         3793 a         4086 c         4361 g         3870 t
ORIGIN      
        1 tgtacgctcc ggtttttgcg cgctgtccgt gtccaaactg actgcgccaa taacgcctgg
       61 tgggataggc tcttagtcag aatacgttgc ctgccacatt acgccacgcg aatttgtttt
      121 acggagagtt acggagtgaa acaatcccgc cgcggtgagc ggcaggttgc ttacaaggtg
      181 aatggatcgg catcgcgcca ggctggaaat ttttcgcgat agtcctgcaa ggcgacgaga
      241 gaaagatctg catcgatacg tgtcgcctgg tgtggttcgg cggtggcgat aatgtcgccc
      301 tggggattaa tgattcggct atcgccgcga taatgtaacc cgttgccatc ggtgccaacc
      361 cggttgcagc ctgcgacata agcctgattt tcaatagcgc gcgccgtcag taatgtttgc
      421 cagtgtagcg agcgcggcgc gggccagttc gctacataca gcgccagatc gtaatcattg
      481 cggttgcgcg accatatcgg aaagcgcaga tcgtaacaga tcaacggcag gatgcgccaa
      541 ccgcgccact gcacgatgat gcgtttatcg cctgcggcat aatgttgatg ttcatccgcc
      601 atacgaaaca gatggcgctt atcatagaga tgaactttgc cttccggttc aaccagtaag
      661 aagcgattta cggcgccgcg ctcagtttgt agcgccgcgc tgccggcaat cagagcgtca
      721 gtttgtcggg ctttggcctg catccacgta atcacgctat cttgcgaaag tgagttatta
      781 gcggcctcca tcgcgaagcc ggtggtaaac atttcaggca gaacaatcac atcccggcca
      841 gatacgagct ctagctgtct gtcaaaatga cgcaggtttg ccaggccgtc catccagact
      901 aaaggttgtt gcaacagagt aattttcaaa ccagacacga tcggagctcc tcattgaaca
      961 gcgtctttac actgtagcat gagcaataat aaaaaagcgg caagaaaaag ccccgcgaaa
     1021 gcggggcagg aaagacacga gactgattat gcggcttcga ctttacgcac tttctccggc
     1081 agctttaccg gtttggtcgc cagcgcttca ggttcaaaat catcaacgtt gatactgcgc
     1141 aggcggctct cttccgcttt cgccaggatg gcggcttcat ctttatctat aagccctttc
     1201 gccagcgcat tgcgcgccag ttcatccaga cgagtaaacg gcagattttt acccagttct
     1261 ttgcagatgc gctggtggat agggtcggca gcgatgacat cacgcagcgc ttcttccagt
     1321 aaaccgaccg gattatgttc ggcgggcgtc agatactgac cgcgcccaat acgtgaacgt
     1381 gtggcgttcg gcacctgtag gatcttcgcc acggcgtgat ccagcttatc agacggcgcc
     1441 agataatgac ggccagtcgg gaagatcatc gcggtgagca atccggccac gacgcggttc
     1501 gggaagttct gcagcagatc gtccatcgct tgttcagcac gatacagcgc atcctgtacg
     1561 ccccagtgca ccagcggcag gtcggcttcg tggcggcctt cgtcgtcgta acgcttcagt
     1621 acggctgagg ccagataaag ctgactcaac acatcgccca gacgcgtgga gatacgctcg
     1681 cggcgtttca ggctgccgcc cagtaccgcc attgacacgt cggacagcag ggccaggttt
     1741 gcgctcagtc ggttcagatg ctggtaataa cgcttcgtgg cgtcgccggt tggcgtatgg
     1801 ctcgttaatc cgcgggtcag gccaagccag aaactgcgga cggtattgct gccgacatgg
     1861 ccaatatgtt taaacaacag tttatcaaag gcattcacat cattattctg cgctgcggcc
     1921 atctcttcca gtacataagg atggcagcga atggcgccct gaccaaagat catcatgcta
     1981 cgggtcagga tattcgcgcc ttccacggtg atcgcgatag gcgcgccctg gtaagcacgc
     2041 gccaggaagt tgctctcgcc cagcataatg cctttacccc cagtgatatc catcgcgtcg
     2101 ataatggact gctggccgcg gtgggtgcag tggtacttca cgatagccga cagtaccgcc
     2161 ggtttttcgc ctagcataat gccgtaggtg attaacgatg cggcggcatc catcacataa
     2221 gcgttacctg caatacgcgc cagcggttct tcaatacctt ccatcttgcc gatagaaatt
     2281 ttgaactgac gacgaatgtg agcataggcg ccggttgcca gcgcgacgga tttcaccccg
     2341 ccagtggagt tggacggcag ggtaataccg cgtcctaccg acaaacattc caccagcata
     2401 cgccagccct gtccggccat tttggggccg ccgataatat aatcaatagg cacgaaaata
     2461 tcgttaccgc gggttgggcc attctggaac ggaacgttaa gcgggaagtg acgacgacca
     2521 atttccacac ccggcgttga ggtggggatc agggcgcagg taatacccag ctcttcttct
     2581 ccgcctaaca atctatccgg atcggaaagc ttaaacgcca agcccaacac ggtagctatc
     2641 ggcgccagcg taatgtaacg cttgttccag gtcagacgca tacccagcac ctgctggccc
     2701 tgccattcgc ccatgcaaac cacgccggta tccggaatag cgcctgcatc agaacctgct
     2761 tccgggctgg tcagcgcaaa gcaggggatt tcttggccgc gcgccagtcg cggcagatag
     2821 tgattcttct gctcttccgt accatagtgc tgcaacagct cgccagggcc gagtgagttt
     2881 ggaacgccga cggtgatagc cagaatcccg gagacgccgg acagtttttg cagtacacgg
     2941 gactgcacat aagcggagaa ctccagcccg ccgtactctt ttttaatgat catcgcaaaa
     3001 aaacgatgct ctttcaggta agcccacagt tccggcggca gatccgccag ttcatgggta
     3061 atctggaaat cgttcgccat ccggcacgct tcttctaccg ggccgtcgag aaacgcttgc
     3121 tcttcggcag tgagttgcgg ttgcggatag ttgtgcagtt ttttccagtc aggcttgccc
     3181 tggaacagat cgccttccca ccaggttgta ccggcatcaa tcgcttcttt ctcagtgcgc
     3241 gacatcggcg gcatgacctt acggaagccg cggaacaccg gtgcggaaat cattgatttt
     3301 cgcatcggtg tgaggttaaa cggcacgagg ataatggcca gaggaaccaa cagccagatg
     3361 gaccacaggc cagcgacgcc aagtgcggcg gtccaggcga gcagaatcag gctgctgaga
     3421 aataaactca cgcggtgata gaacaatgcg ccgagcagaa caaccgtagc gataatactc
     3481 aaaatcatca taacgaaaag ctcccttgct tgtaggaggt ctgaccactt gtgatgatta
     3541 ggttgtagtg gatgtaaaat cttttagcaa tgtgtttaca aaataattac aacaaagctc
     3601 acattgttgc cgtttttggg ggcacgaaaa atcaaaagcg tgaggcgtta attcggctta
     3661 tgcttctcgc ctgtactgct atccggtaca ctgcatactg tcatttacat tcatgctgaa
     3721 ggatatcctc atgtaccagg atcttattcg taacgaactg aacgaagcgg cggaaacgct
     3781 ggctaatttt ttaaaagatg acgccaatat tcacgccatt cagcgcgcgg cggtcctgtt
     3841 ggctgacagt tttaaagcgg gtggtaaggt actttcctgc ggtaacggcg gctcccattg
     3901 cgatgcgatg cactttgctg aagagctgac aggtcgttat cgtgaaaatc gtccgggcta
     3961 cccggcaatt gcgatttctg atgttagcca tatatcctgc gtcagtaatg attttggcta
     4021 tgactatatt ttctctcgtt acgttgaggc ggtagggcgc gaaggcgatg tcctgttagg
     4081 gatctcgacg tcgggtaact ctggtaacgt gattaaagcg attgccgcgg cccgtgaaaa
     4141 aggcatgaaa gtgattacgt tgaccggcaa agacggcggc aaaatggcgg gaacggcgga
     4201 tattgaaatt cgcgtaccgc acttcggtta tgccgatcgt attcaggaaa ttcatatcaa
     4261 agtgattcat atcctgattc agttgatcga aaaagagatg gttaaataag ccgataattt
     4321 ttgccggtct tatcgggcct ggaacgagta ggcccgataa gcgaagcgcc atcgggcatt
     4381 gtgccggatg gcgacgcaag cgtcttatcc ggcctacgag ctgtgctttg ctggtcttat
     4441 caggcaatta accgttttaa ggtaggtgat gtatgtgcga actgcttggg atgagcgcca
     4501 atgtgccgat ggatatctgc tttagcttca ccggactggt gcagcgtggc ggcggaaccg
     4561 ggccgcataa agacggctgg ggaattacct tttacgaagg aaagggctgt cgcacgttta
     4621 aagatccgca accgagctac cattcgccga ttgcgaaact ggtacagaat tacccgatca
     4681 agtcctgctc ggttatcgct catatccgtc aggctaatcg cggtgaagta gcgctggaaa
     4741 atacacaccc ttttacccgg gaattatggg gacgcaactg gacttatgct cataacggtc
     4801 agctcaacgg ttataagtcg ctggaaaccg gtaattttcg tccggtgggg gaaaccgaca
     4861 gcgaaaaagc gttttgctgg ctattgcata aattaacgca gcgttatccc cgcacgccgg
     4921 gcaacatgac agcggtattt aaatatattg cgacactggc gacggtatta cgtgaaaaag
     4981 gcgtttttaa catgctgctg tcagatgggc gatatgtgat ggcgttttgc tcaacccatt
     5041 tgcactggat cactcgccgg gcgccgtttg gcgtagccac gctggtggat caggatatgg
     5101 aaattgattt cagttcacag accacgccaa atgacgtggt taccgtgatt gctacccagc
     5161 cgctaacggg gaatgaaacc tggcaaaaga ttatgccagg cgaatgggcg ttattttgcc
     5221 tcggagagcg tataatttga ggccagctgt ggctgaacga cttcgtgact caacggtttg
     5281 ctcacgacgt aacgtccatc aacgatagaa acagttggcg gcttatgcgt ctgttcaaaa
     5341 taatcgtagc cgggttttag ctgcgcccag aaatctttgt aatatgaata tttatgacgc
     5401 tgcatattgg cgtcggtcat ccggaacgga taaatactca cctgtacgct tggctgacca
     5461 aagaccagcg cggcggtgac aaactggaaa atctcatcaa tgccgctgtc ggtcatggca
     5521 tagcagccga cggaaacaca ggcaccgtga atcatcagat atttaccatc atagccatgc
     5581 gcgcgatcgt aggcattggg aaaaccaatg ttgatggcct tataaaaacg gctgtctggc
     5641 ttgagttgat tacgctgaac gctgtaaaac ccttccggac ttttaaaatc gccctgacgg
     5701 cgtttcgggc ctaacccgcc ggaatagttg caaattttgt agctatcaag caactggtat
     5761 tgctcaccca ttttgacgta gagatcaagg gtgcgctctt ctttaaaaat ttgaatatag
     5821 accggtgagc ccattaactg ctgcttatac tctttactga ccggcgtgac ggggctgctg
     5881 ctgctcagca aaccggcaaa tgagacgcac ggcatcagaa gcatcgcaag aaaaaatgcg
     5941 attttacgca tactgcttgt tccttgataa aacggttaca cacgccagaa cggcaaaaga
     6001 gtccccaaat cggagtaatc tggatttgga gcgctcacat tagcaccacg gcagtttttc
     6061 gcaagtcccc gtgtgtacgt ttacaatttt cccgccgctt tcgtcgtcat accttcgaat
     6121 atgtcgcatt tttaacgcga atgtctcttt gcgcgcaata aaacatactg tacacttaaa
     6181 cagtattgtg ggggcgagcg atgcgcaaaa tcatacatgt tgatatggac tgtttttttg
     6241 ccgcggtaga gatgcgtgat aatccggcgt tacgcgatat ccccattgcc attggcggga
     6301 gtcgtgagcg aagaggcgtt atcagtaccg ccaactatcc tgcgcgccag tttggcgtac
     6361 gcagcgcgat gccgactgcc atggcgctaa agctgtgccc ccatctcacc ttactgcctg
     6421 gccgctttga cgcctataaa gaggcttcgc ggcatgtacg tgacatcttt tcccgctaca
     6481 cttcactgat tgaaccgctc tcgctggatg aagcctggct ggatgtgact gacagcccgc
     6541 actgttatgg ttcggcaact ctgatcgcca gggagattcg tcagactatt ttcaatgaac
     6601 tgcaactcac cgcctccgcc ggcgttgcgc cagtgaaatt tctggcgaag atcgcctccg
     6661 atctcaataa accgaacgga caatatgtta ttacgccagc cgatgtaccc gactttctta
     6721 aaacgttgcc gttagccaaa attccaggcg tggggaaagt ttccgccgcc aaactggaaa
     6781 atatggggtt aagaacctgc ggggatattc aacagtgcga tctggcgatg cttctcaaac
     6841 gctttggtaa atttggccgg gtattatggg agcgtagtca gggtattgac gagcgtgatg
     6901 ttaacagcga aaggctgcgt aaatcggtag gcgttgagcg tactctggcg gaggatattc
     6961 atgaatggtc ggactgcgag gccattattg aacatttata tccggaactg gagcgtcgtc
     7021 tggctatagt aaagcccgat ttactgattg cccgacaggg cgttaaatta aaatttaatg
     7081 attttcagca aaccactcag gaacatgtct ggccgcaatt aaataaagaa gacttaatta
     7141 ccaccgcccg taaaacctgg gacgagcgtc gcggcgagcg cggcgtacgg ttggtggggc
     7201 tacacgtaac gctgctcgac cctcagttgg aacgacagtt ggtgttaggg ttataagtca
     7261 ggctattaag attttatcac tattacgatt gcgccatcta aatttcagta ttactatacc
     7321 cgcgttttct cattctcaat aactgcaaag gaggttcatc atgacacttt attctctgaa
     7381 cgcactttgc agacctttcc aggattaatt ttcttttatt gccctggatt agtctgccat
     7441 ttcctgattt tttaattcat atatggaatg gtatatgggc aattatattc gtcctttatc
     7501 agatgtggta ttttctatcg catcggataa cctgtggatc gaagattccg cgatccaaca
     7561 attatatacg acggctaagt taaccggtat gaaacgcgtt atcgggatgc cagatctgca
     7621 tccggggcgc ggctatccta ttggcgcagc ctttttctcg cgtggacgtt tttatccggc
     7681 gctggtcggc aacgatatcg gctgcggcat ggcgttatgg caaacggata ttttagggcg
     7741 taaatataac gccgataaac tggagaagcg gctggcgtcg ctgcctgacg tggcggacgc
     7801 gcagtggctg gaggagaatg tccccgccgt aatgcagcat cattcgtggc gctctgcgct
     7861 gggttccatt ggcggcggca atcattttgc cgagctgcag caggtcgatc gcatcgtcga
     7921 tgctgattcg ttcgctttgt cggggttgca aaaagcgcag ttattactgc tggtacacag
     7981 tggttcacgc ggtctggggc aagctatcct gcgtcgtcat gtggaggcgt tttcgcataa
     8041 cggtttgccg gaagatagcg acgatgcgcg ccactacctt gcagaacatg acgatgcgct
     8101 ggcatttgcc cgcagtaatc gcgcgctgat tgcccgccgg atactgcaac agctcagggc
     8161 tgagggcgaa ccgcggctgg atgtggcgca taacttcgtt gaaccctgta ctgtcgcggg
     8221 tgaggcgggg tggctgcacc gtaaaggcgc tacgccagat gggcagggac tggtgattat
     8281 ccccggctcg cgcggcgatt atagctggct ggtgaaaccc gtcgtcagcg aggagagcct
     8341 cttctccctg gcgcacggcg cggggcgcaa atggatgcgt accgagtgta aagaccggtt
     8401 atcggcaaaa tttaccccgc gacagctctg ccgtactggg atgggtagcc gggtgatttg
     8461 ccgcgatcgc cagctcattt atgaagaagc gccgcaggcg tataaatcca tcgatagcgt
     8521 tgtggattgt ctggcagacg ccggactgat tacgccagtt gcctgcctgc gtccggtgct
     8581 gacgctgaaa acctcagggg agaaaagcgc atgatcttac tgcaactttc ttctgcgcag
     8641 ggaccggacg agtgttgtct ggcggtaaaa aaagcgctgg attgtctgac gaaagaagcc
     8701 gccagagaaa aggtatcgct gacacggctt gaaacagagc cgggacgatt accagacacg
     8761 ctgcgttctg cgctggtctc gctggacggc gaaaaagcca tggctttcag tgaacgttgg
     8821 tgcggcacgt tactgtggat ttgtaccagc ccgtatcgcc cgcaccatgg gcgaaaaaac
     8881 tggtacgtcg gcattgggcg cttttccgcc gacgagcaca tacagtctga tgagattcgt
     8941 ttcgagactc tgcgctcttc cggcccgggt gggcagcacg ttaataaaac cgactcggca
     9001 gtgcgggcca cgcacctggc gagcgggatt agcgtgaagg ttcagtcgga gcgcagtcaa
     9061 catgcgaata agcgtctggc ccggctgctg attgcctggc ggctggaaca gcaacggcaa
     9121 aatgagtgtg cggcgttgaa gtctgaaagg cgtctgttcc atcatcagat tgagcgcggc
     9181 aatccgctac ggatatttaa aggaatggcg tttacgccac aataattcgg tgctaccagc
     9241 gctgttatag ggctgtctgg ctattcgcgt gtagccgcag cgctattcag cgcatccagg
     9301 agagcttatc tggcaatgga tacccgatat tccatattga tagcccgtcc agaaatgaga
     9361 cgggcatttt agcgctttct tacttcgcag gaatcgcttt cagcaattcg gtcagcagag
     9421 tccagtagtg gcccacgctt tcgatatgta cctgctcatc cggagagtga ggtccggtaa
     9481 tggtaggccc aatagaaacc atgtccatat ccggataggg tttcttaaac agaccgcatt
     9541 ccaggccggc gtggataatc tggatgttcg gtgtcttgtt gaacagacgc tgataggttt
     9601 cccgcaccag gtgcatgacc ggcgagttcg catcgggctg ccagcccgga tagctgcctt
     9661 ttgcttcggt tttcgcgcca gccagcttgc ccagcgaatc cagcatactc accacataat
     9721 ctttaccgct gtcgataaga gagcgaatca ggcagtgaat ttcgacattc gcatcagaca
     9781 ttgtgaccac gccaacgttc agcgatgttt ccactacgcc tttcgccacg tctgaattgc
     9841 ggatcacgcc gttcggcgtt gcgttcagca ggcgcacaaa ggtatcgcgt gacggcgcgg
     9901 tcaatgcggc tttatcactg gcaacctcat tgagttgcag cgtcaggttt ttctcttttt
     9961 ccgccagttc gtttttcaga atatcctggt aagcgttcac taatgttttc agagcgccta
    10021 cgttgtctgt ggcaacggcg agggtagcga acgcttcgcg cggaatcgcg ttacgcagcg
    10081 tgccgccgtt gaaatcgatc agacgcagat ccagttcttc tgcgtgcccg gccagaaaac
    10141 gcgccagcaa tttgttggca ttgccaaggc cgaggtgaat ttcaccaccg gagtggccgc
    10201 ctttcagacc tttcagggtt agcttaaagc atgcaaatcc tgcgggtaca gcttcacggg
    10261 tcaacggcag attagaggta aaatcgatgc cgcctgcgca gcccatatag atctcacctt
    10321 cttcttcaga gtcggtgttg atcaggatgt cagcctgcaa ccagccggac tggaggccga
    10381 acgcgccatc catgcccgct tcttcggtca tggtcagcag cacttccagc gggccatgga
    10441 cgacattatc gtcagccagt accgctaacg cagaagccat tccaatacca ttgtcggcgc
    10501 cgagcgtagt accgcgcgct ttaacccatt cgccatcaat ataaggccgg atgggatctg
    10561 tagtgaagtc gtgaacggtg tcgctatttt tttgcggcac catatccaga tgcgcctgta
    10621 aaacgaccgg cttgcgattt tccatacctg cagtggcggg cttacggatc agaatattac
    10681 cgacctggtc gcgatccacg taaaggcctt tctctttggc ccaactcaca atatgttccg
    10741 cgagttgctc ttcgtgatag gacgggtgag gaatagaaca gattttggca aaaatatccc
    10801 acaaaggttg tggtgataac tgagacagtt cagacacgat aagtctcctt ggcggtggtc
    10861 tgaaaaacgt tcttacaggc cacagggtta gcggaattaa taactcttac gagatgcgac
    10921 tgagaatacc actttctccg cctgcgggta gtataaagca tacaaaaaga ggcgtggatt
    10981 ccgctaaaca ctggttttta gcgcgtcagg tctctataat ctcgcgcaac tatttccccc
    11041 tcgaacactt tttaagccgt agataaacag gctgggacac ttcacatgag cgaaaaatac
    11101 gtcgtcacct gggacatgtt gcagattcac gcacgcaaac tggcgagccg cctcatgcct
    11161 tcagaacaat ggaaaggcat tattgccgta agtcgtggcg gccttgtacc gggcgcacta
    11221 ctggcgcgtg aattgggcat tcgtcatgtc gataccgtat gcatctccag ctacgatcac
    11281 gataaccagc gcgaactgaa agtgctgaaa cgtgcagaag gcgatggcga aggctttatc
    11341 gtcatcgacg atctggtcga taccggcggc accgccgtcg cgattcgcga aatgtaccct
    11401 aaagcgcatt tcgtcacgat tttcgctaaa ccggcgggcc gtccgctggt tgatgattat
    11461 gttattgata ttcctcagaa cacctggatt gagcagccct gggatatggg tgtggtattt
    11521 gtaccgccga tttcaggtcg ttaatcagca gcttttcaga gcgcccggca atgccgggcg
    11581 ctgttttatt ggttacaata agcctctatg agtatccaag gaggctgcac gaatgacaca
    11641 ggctaacctc agcgaaaccc tgttcaaacc ccgctttaaa catactgaaa cgtctaccct
    11701 tgtccgtcgg ttcaatcgtg ggtcgcagcc gcccatgcaa tccgcgctgg acggtaagaa
    11761 cgtcccgcat tggtatcgca tgataaaccg cctgatgtgg atttggcgcg gcgttgaccc
    11821 acgagaaatc cttgatgtgc aggcgcgcat tgtgatgagc gacgcagagc gaacggatga
    11881 tgatttatac gatacggtca tcggttaccg cggcggcaac tggatttatg agtgggcaaa
    11941 gcaggcgatg gactggcagc agaaagcctg tcaggaacag gacgccatgc gcagcggacg
    12001 ctactggctt catgcctcaa cgctctataa cattgccgcc tacccgcatt tgaagggcga
    12061 tgagctggcg gagcaggcgc aggcgctggc gaatcgcgcc tatgaagagg ccgcgcagcg
    12121 gttgccaggc tcgttacgtg aaatggaatt tgccgttcct ggcggttcgc ctgtcaccgc
    12181 gtttttacat atgccgaaag gggatggtcc gtttccgacg gtgctcatgt gcggcggcct
    12241 ggacgccatg caaatcgact attacaccct gtatgaacgc tatttcgcgc cgcgcggtat
    12301 cgcgatgtta acgcttgata tgccttcggt tggattttca tcaaagtgga aattaaccca
    12361 ggattccagc ttgctccacc agcatgtgtt aaaagcgctt cctaatgtcc cctgggtgga
    12421 tcatacccgt gttgcggcgt ttggtttccg ttttggcgcc aacgttgcgg tgcgtctggc
    12481 ctatctggaa gcgccgcgtt tgaaagcggt ggcttgcctg gggccggtgg tccatgcgct
    12541 acttagcgat ccgcaacgac agagcacagt gccggagatg tatctggatg tgctggccag
    12601 ccgtctgggt atgcatgatg cttcggatga ggcgctgcgt gtggagctca accgctattc
    12661 gttgaaagta caggggctac tgggcagacg ttgtcctacg ccaatgcttt ccggcttctg
    12721 gaaaaacgat cctttcagcc cggaagaaga gtctcgctta attacaacat catcttcaga
    12781 cggtaagctg atagagatcc cttttaaccc ggtgtaccgc aattttgacc acgcgctgca
    12841 agaaattacc gactggatta atcatagatt gtgttaatag attgataaat tctattgatt
    12901 tggtaaaaca gttgcttcat taaaggagat cgcaatgacg ttaccgagtg gacacccgaa
    12961 aagtagattg atcaagaaat ttaccgcgct tggcccctat atccgggaag ggcagtgcga
    13021 agacaatcgt ttttttttcg attgcctggc agtttgcgtc aacgtgaagc ccgcgccaga
    13081 gaagcgtgaa ttttggggct ggtggatgga gctggaagca caagagaaac gcttcactta
    13141 tcgttatcag tttggtttgt ttgataaaga gggcaactgg accgtagtgc cgattaacga
    13201 aaccgaagtg gtggagcgac tggaatacac gctacgcgag tttcatgaaa agctacgcga
    13261 cctgctgatt tctatggagc tggcgctgga gccgtctgac gatttcaacg acgagccggt
    13321 aaaactgtcg gcataaccct gctgccatgc ctgatggcgt agcgccatca ggcacaatgc
    13381 gacttatcag aactggtagg tcaaccctat tgccacaata tcatcgtcat taatgcctaa
    13441 cgtgttatcg ctatcaagct gattgatttt gtaatctaca aacgcggaca tatttttgtt
    13501 gaaataatag attgcgccaa cgtcaatgta attcaccaaa tcctcactgc cgacgccctc
    13561 aatatctttg ccttttgaca gcacatagcc taatgacgga cgcagaccaa agtcaaactg
    13621 atactggata accgcttcga agttttgagt tttattggca aatccgccgg aaactggcgt
    13681 catgttgcgg gtttctgaat agaaagtcgc aatataaata tcattcgcgt catacttaac
    13741 acccgtagcc caggcttcgg ctttatcgcc cgtaccgcgg cgctgcagat tttgctccct
    13801 ggtgcgatcg gagagagtat aagcgccgct gacggcaaaa tcactgccgc cgaaatcata
    13861 gctcacggaa gtgccgaagc cgtcgccgtt ttgctttttc acatcgcgat cttcgttttt
    13921 cccctgatac tgtaaggtaa gatccagtcc atcaacgatg ccgaagaaat cggtattgcg
    13981 gtaagtcgcc agcccgctgg cgcgtttagt cataaaatta tcggtctggg cggaagagtc
    14041 gccgccgaat tcgggaaaca tatccgtcca ggcctcaaca tcgtacagcg cgcccaggtt
    14101 acgtccatag tcaaaagaac cgatatcttt taatttcaga ccagcaaagg ccaggcgggt
    14161 tttttgctgg gacgaatcac tttcggcttt attaccggca aactcagctt cccagcgccc
    14221 gtagccggtc aattgatcgt taatttgcgt ttcgccttta aaaccaaaac gaacgtagct
    14281 ttgatcgcca tctttgctgt cataatcgct catatagtgc atggctttaa cttttccata
    14341 cacatcaagc ttattaccgt ttttattgta aacctcggcg gcgtgaacag atgctgatgc
    14401 gatgatactc accactattg ccagagtgct cttattcatt tccattcctg ttttaattac
    14461 gcgctatgat ttgtcgggag acccggtaaa aaacaggaag gtttttaacg ttcggtaatg
    14521 aaagatttat gacaaagtga gagttttttt aaaaaaatat atttaattgt tgcggtaata
    14581 aaatggtcaa attccgccgc tacgcttgct gatcctgcgc aacaaaattt cacgctacgc
    14641 gtacaggttg ttggcaaccg gagccagtcc tgctaaaacg ttcatttggt ctttatttct
    14701 tattttgaac ggcagagaat catgagtgac agccagacgc tggtcgtaaa actcggcacc
    14761 agcgtgctaa caggcggatc gcgccgcctg aaccgtgccc atatcgtaga acttgtccgc
    14821 cagtgcgcgc agctacacgc cgcgggacat cgtattgtta tcgttacctc tggcgcgatt
    14881 gccgccggac gtgaacatct cggctacccg gaactgccgg caacaattgc ctctaaacag
    14941 cttctggcgg cggtagggca aagccgtctg attcaactgt gggagcagtt gttttcaatt
    15001 tacggtatcc atatcgggca gatgctgttg acgcgtgcgg atatggaaga cagagagcgc
    15061 tttctgaacg cccgcgatac gctgcgtgcg ttactggata accatattgt gccggttatc
    15121 aatgaaaatg atgccgttgc gacagcggaa attaaagtgg gcgacaacga taacctctcc
    15181 gcgctggcgg cgatcctggc aggcgcggat aaactgctgc tgctgaccga tcagcaagga
    15241 ttatttaccg ccgatccgcg tagcaatccg caggcggagc ttatcaaaga tgtgtatggc
    15301 gttgacgatg cgctgcgctc tatcgcggga gacagcgttt ccgggctggg aaccggtggt
    15361 atgagcacta agcttcaggc ggcagacgtg gcctgtcgcg cgggtattga tacgattatt
    15421 gcctcaggca gtaaaccggg cgtgatcggc gatgtgatgg aggggatttc cgtcggcacc
    15481 cgttttcatg cgcaagcctc gccgctggag aaccgcaaac gttggatctt cggcgcgccg
    15541 ccggcaggcg aaattacggt tgatgaaggc gcgaccgcgg caatgctgga acgtggcagt
    15601 tcacttctgc caaaaggcat caaaagcgtg acgggcaatt tttcgcgggg ggaggtcatc
    15661 agaatttgta acctgcaagg gcgtgatatc gctcatggcg tcagccgtta taacagtgat
    15721 gctctgcggc ggatagccgg tcaccactct caacaaatcg atgcgattct gggctatgaa
    15781 tatggcccgg tcgctgttca tcgtgatgac atgattactc gataaggaac aggcatatgc
    15841 tggaacaaat gggcattgct gctaaagcgg cgtcgtataa gctggcgctg ctctccagct
    15901 gcgaaaaaaa tcgcgtgctg gaaaaaatag ccgatgaact ggaagcgcaa atggaaagta
    15961 tcctcagcgc gaacgtacaa gatgttgagc aggcgcgagc caatggcctg agcgaagcga
    16021 tgctggaccg cctggcgctg acccctgcgc gtctgaaagc gattgctgac gatgtgcgcc
    16081 aggtctgtaa tctcgccgac ccggccgggc
//
LOCUS       DAGWFR010000447         7237 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.guided.190, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000447 DAGWFR010000000
VERSION     DAGWFR010000447.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 7237)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7237)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7237
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.guided.190"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..241)
                     /locus_tag="MOX77_004946"
     CDS             complement(<1..241)
                     /locus_tag="MOX77_004946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12-serine
                     acetyltransferase"
                     /protein_id="HCA3360294.1"
                     /translation="MVEIIPVSTTLELRAADESHVPALHQLVLKNKAWLQQSLDWPQY
                     VTSQEETRKHVQGNMLLHQRGYAKMYLIFCQDEMAG"
     gene            458..1576
                     /locus_tag="MOX77_004947"
     CDS             458..1576
                     /locus_tag="MOX77_004947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M42 family metallopeptidase"
                     /protein_id="HCA3360295.1"
                     /translation="MTFSVQETLFSLLRLNGISGHESSIANVMQHAFEQQAKDVWRDR
                     LGNVVARYGSDKSDALRLMIFAHMDEVGFMVRKIEPSGFLRFERVGGPAQITMPGSIV
                     TLAGCSGDIMGCIGIKAYHFAKGDERTQPPALDKLWIDIGAKDKADAERMGIQVGTPV
                     TLYNPPHCLGNDLVCSKALDDRLGCTALLGVAEALASTPLDIAVFLVASVQEEFNIRG
                     IVPVLRRVRPDLAIGIDITPSCDTPDLQDYSDVRVNHGVGITCLNYHGRGTLAGLITP
                     PRLLRMLETTAHENNIPVQREVAPGVITETGYIQVELDGIPCASLSIPCRYTHSPAEV
                     ASLRDLADCIRLLTALANMSPEQFPIDPETGATQEARP"
     gene            1573..1854
                     /locus_tag="MOX77_004948"
     CDS             1573..1854
                     /locus_tag="MOX77_004948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HCA3360296.1"
                     /translation="MMKKILVACGTGMSTSTMIAQKLQDFLAEQGIAATTAQCCLNEI
                     PLNCNGMDLIVTSMRTHSDYGIPTLNGAALLTGINDDALKQEIKALLTQ"
     gene            1865..3178
                     /locus_tag="MOX77_004949"
     CDS             1865..3178
                     /locus_tag="MOX77_004949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HCA3360297.1"
                     /translation="MFDYILSLGGTVFVPIIMIIIGLIFRIPWLQAVKAGVTVGIGFV
                     GMGLVIVMAIDSLSPPIKVMIERFGLTLHVFDVGAGPASGVGYATAIGAMIIPVIFLL
                     NVGMLVTRLTKTMNVDIYNYWHYAITGTVVQLMTGSLIYGVLGAICHAALSLKMADWT
                     TKRVQNIVGLEGISIPQGYGSSSVPLFVLLDAIYEKIPFMKGRNIDAQEIQKRYGMVG
                     DPVIIGVVLGLIFGLAAGEGFKGCATLMITVAAIMVLFPRMIRLIVEGLMPISDGARK
                     FFQKHFKGREVFIGLDTAVTLGHPTTIAVGLLLIPIMLILASILPGNKVLPLADLPVA
                     PFFICMATVIHRGDLIRTLLSGIIVMITVLLIATQFAPYFTDMALKGGFSFAAENAQI
                     TALSVGNMFGWSISELMSLGMIGVVIVVGIVASIILVLRKRELPE"
     gene            3192..3998
                     /gene="sgcQ"
                     /locus_tag="MOX77_004950"
     CDS             3192..3998
                     /gene="sgcQ"
                     /locus_tag="MOX77_004950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BtpA family protein SgcQ"
                     /protein_id="HCA3360298.1"
                     /translation="MSWLKEVIGTEKAVIAMCHLRALPGDPGFDTRKGMNWVIDRAHD
                     DLMALQNGGVDAVMFSNEFSLPYLTKVRPETTAAMARIIGQLMSEIRVPFGVNVLWDP
                     VASFDLAMATDAKFIREIFTGAYASDFGVWDTNVGETIRHQHRIGAGHVKTLFNIVPE
                     AAVYLGNRDVCSIAKSTVFNNNPDALCVSGLTAGARTDSAILKRVKDTVPDTVVLANT
                     GVCLENVEEQLCIADGCVTATTFKKDGVFANFVDQARVAKFMEKVRHIRQ"
     gene            4130..4567
                     /locus_tag="MOX77_004951"
     CDS             4130..4567
                     /locus_tag="MOX77_004951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HCA3360299.1"
                     /translation="MINDVKWVQAQRHASDWRHALDIAVRPLITFGAAAPCYLDGIIE
                     NTLKWGPYYLIAPGIALPHARPEQGANHNQISVTTLSTPVAFGNADCDPIWLLLCASA
                     TDAEAHIRTIQRISQWLDSPESVAMLQDAPNDAALFAQLTALR"
     gene            4579..5211
                     /locus_tag="MOX77_004952"
     CDS             4579..5211
                     /locus_tag="MOX77_004952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3 epimerase family protein"
                     /protein_id="HCA3360300.1"
                     /translation="MILHPSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNIT
                     FGMKTIQAVAQYSRHPLSFHLMVSSPQRWLPWLAAIRPGWIFIHAESVQNPSEILADI
                     RAIGAKAGLALNPATPLLPYRYLALQLDALMIMTSEPDGRGQQFIAAMCEKVSQSREH
                     FPAAECWADGGITLRAARLLAAAGAQHLVIGRALFTTANYDVTLSQFTAL"
     gene            5227..6018
                     /locus_tag="MOX77_004953"
     CDS             5227..6018
                     /locus_tag="MOX77_004953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HCA3360301.1"
                     /translation="MSQQRPDRIKQMLHYLWQHRHLSTQQAIELFGYAEATVRRDFHY
                     IASRYPGMVRGHGCIDFDDSTEDKEYVFDVKRTLQSEAKREIAALARTFIKDGDCFFL
                     DSGSTCLELAKCLVDAKVKVICNDIKIANELGGFPHVESYIIGGLIRPGYFSVGESLA
                     LEMINAFAVERAFISCDALSIETGITNATMFEVGVKTRIIQRSREVILMADHSKFDTV
                     EPHAVATLSCITTILSDSALPSAIARRYQQAGCRLIMSDPSSGAR"
     gene            6018..6452
                     /gene="aac(6')"
                     /locus_tag="MOX77_004954"
                     /pseudo
     CDS             6018..6452
                     /gene="aac(6')"
                     /locus_tag="MOX77_004954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460578.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cryptic aminoglycoside N-acetyltransferase
                     AAC(6')-Iy/Iaa"
     gene            complement(6510..>7237)
                     /locus_tag="MOX77_004955"
     CDS             complement(6510..>7237)
                     /locus_tag="MOX77_004955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alpha-hydroxy-acid oxidizing protein"
                     /protein_id="HCA3360302.1"
                     /translation="NPFFFQLYMSKNNQFNEFILAQAVKHGAKAIILTVDSPVGGYRE
                     EDIKNNFQFPLSFANLEMFARKNDDGSKTGKGAGISEIYAQAKQAFTPEDIAYVHRIS
                     GLPVIVKGIQSPEDAEIAIQAGAAGIWVSNHGGRQLDSGPSSFDMLPAIAKVVNKRVP
                     VIFDSGVRRGSHVFKALASGADIVAVGRPVLYGLNLGGAQGVASVIEQLNKELTINMM
                     LGGARNIEQVKTTRLLTEKDLPQ"
BASE COUNT         1664 a         1909 c         1889 g         1775 t
ORIGIN      
        1 cgcccgccat ctcatcctgg cagaaaatca ggtacatttt ggcgtaacca cgctggtgca
       61 acagcatatt accctgcaca tgcttacgcg tttcctcctg cgacgtgaca tattgcggcc
      121 agtcgagcga ctgttgtagc cacgctttgt ttttgagtac cagttggtgc agcgccggaa
      181 catgactttc atctgccgct cgcagttcca gcgtcgtgct aacaggaata atttccacca
      241 tcgcgttgcc cttcttcgtt gttggtcgtg atcacataaa tagcctggtt taccgataac
      301 ccgcaggtga tatgagcgtt tttattgtat cgccatcaca ttatttttta ttgaccatat
      361 ttagcgtatt tccgcgtgac acatttcaca cttatccaac cattctccgc ctataaaacg
      421 ctcaacgact gattgtttta tcaccacgga gacgccaatg accttttctg tgcaggaaac
      481 gcttttttct ttactgcggc taaacgggat ttcaggacat gaaagcagta ttgcaaacgt
      541 tatgcagcac gcgttcgaac agcaggccaa agacgtctgg cgggatcgct taggtaatgt
      601 cgtcgcccgt tatggcagcg ataaatccga cgcgcttcgc ctgatgattt ttgcgcatat
      661 ggatgaagtg ggttttatgg tacgcaagat cgaaccctcc ggttttttac gttttgaacg
      721 cgtgggcggc ccggcgcaaa ttactatgcc cggttcgatt gtgacgcttg ccggatgttc
      781 aggcgatatc atgggctgta tcggtattaa agcatatcac ttcgcgaagg gtgacgagcg
      841 cacccagcca cccgcgctcg ataaactctg gattgatatc ggcgcaaaag ataaagcgga
      901 tgccgaacga atgggtattc aggtggggac gccagtaacc ctttacaacc cgccgcactg
      961 tctgggcaac gacctggtgt gcagtaaggc gctggatgac aggctggggt gtacggcgct
     1021 actgggcgtc gccgaggccc tcgcctccac accgcttgat atcgcggtat tcctggtcgc
     1081 gtcggtacag gaagagttca atattcgcgg gattgttccc gttttacgac gcgtgcgccc
     1141 cgacctggcg attggtattg atatcacccc ctcctgcgac acgcctgacc tgcaggatta
     1201 ctcggatgtg cgggtcaacc acggcgtcgg catcacctgt ctgaactatc acggacgcgg
     1261 tacgttggcg ggactgatta cgccgccgcg tttgctgcgg atgctggaga ccaccgcgca
     1321 cgaaaataat attcccgtac agcgtgaagt cgcgccaggc gtcatcaccg aaacaggcta
     1381 cattcaggtt gaactggacg gtattccctg cgccagtctt tctattccct gccgctatac
     1441 ccactcgcca gccgaagtcg ccagcctgcg cgacctggct gattgtatcc gtttactgac
     1501 tgcgctggcc aatatgtcgc cagaacagtt tcccattgac cctgaaacag gcgctacaca
     1561 agaggcacga ccatgatgaa aaagatcctt gtggcatgtg gtaccggcat gtcgacatca
     1621 accatgattg cacaaaaact gcaggacttt cttgcggagc aaggcattgc ggcaaccacg
     1681 gcgcaatgtt gtctgaatga gatcccgttg aactgtaacg gtatggatct catcgtaacg
     1741 tccatgcgta cgcacagtga ctatggcatc ccgacgctca acggcgccgc cctgctgaca
     1801 ggcatcaacg acgacgcatt aaaacaagaa atcaaggcgc tgttaacaca ataaaggggg
     1861 cattatgttt gattacatcc tgtctctcgg cggcaccgtc tttgtgccca tcattatgat
     1921 tatcatcggc ttaatctttc gtattccctg gctgcaggcg gtgaaagcgg gggtgacggt
     1981 cggcatcggt tttgtcggca tggggctggt gatcgtcatg gcgatcgaca gtctcagtcc
     2041 gccgattaaa gtgatgattg agcgttttgg cctgacgctg catgtgtttg acgtcggcgc
     2101 cgggcccgca tccggcgtcg gctatgcgac ggccatcggc gcgatgatca ttcccgttat
     2161 ctttctgctc aacgtcggta tgctggtgac tcgtctgacc aaaaccatga acgttgatat
     2221 ttataactac tggcactacg ccattaccgg aacggtcgtc cagttgatga ccggcagtct
     2281 gatttatggc gtactgggcg cgatttgcca tgccgccttg tcgttgaaaa tggccgactg
     2341 gacgacgaaa cgggtacaga acattgtggg tctggaaggg atttctattc cgcaagggta
     2401 tggctccagc tccgtgccgt tgttcgtatt gctggatgcg atatacgaaa aaataccgtt
     2461 tatgaaagga cgcaatattg acgctcagga gatccaaaaa cggtatggga tggtcggcga
     2521 cccggtgatc attggcgttg ttctcgggct gatcttcgga cttgctgcag gcgaaggctt
     2581 taaagggtgc gcaaccttaa tgattaccgt ggcggcgatt atggtgctgt ttccgcgcat
     2641 gattcgcctt atcgttgagg gattaatgcc catttccgac ggcgcgcgta agttcttcca
     2701 gaaacacttt aaagggcgcg aagtctttat cggtctggat accgcagtga cgttaggcca
     2761 cccgaccacc atcgcggttg gactgctgtt aattcccatc atgttaattc tggcgagcat
     2821 actgccgggc aataaagtcc tgccgctggc tgatttaccg gtcgcgccat tttttatctg
     2881 catggccaca gttattcatc gcggcgatct gattcgtact ctgctcagcg gcatcattgt
     2941 catgattacc gttttgctga tcgccaccca gttcgcgccg tactttaccg atatggcgct
     3001 caaaggcggc tttagcttcg ccgctgaaaa cgcgcaaatt accgcgctgt cggtgggaaa
     3061 tatgtttggc tggtcaatat ctgaattgat gtcgctgggc atgattggtg tggttattgt
     3121 ggtcggcatt gtcgccagca tcatacttgt cttacgtaaa cgtgaactac cggaataagg
     3181 agcaacccag aatgagttgg ctaaaagagg taataggaac agaaaaagcc gttatcgcca
     3241 tgtgccattt acgggcgctg ccgggcgatc ccgggttcga taccaggaaa ggcatgaact
     3301 gggtaattga ccgcgcccat gacgatttaa tggcgctaca aaatggcggc gtggatgcgg
     3361 tgatgttctc caacgaattt agtctgcctt atttaacgaa agtcagaccg gaaacgactg
     3421 ccgcgatggc acgaatcatc ggtcagttaa tgagtgaaat tcgcgtaccg tttggggtaa
     3481 acgtgttgtg ggaccctgtg gcctcttttg atttggcgat ggcgaccgac gcaaaattta
     3541 ttcgcgaaat tttcaccggt gcttacgcca gcgattttgg cgtctgggat acgaatgtcg
     3601 gcgaaactat tcgccatcag catcgcatcg gcgcaggcca cgtgaaaacg ctgtttaaca
     3661 tcgtgccgga agcggcggtg tatctgggaa accgagatgt ctgttcaatt gcgaaatcga
     3721 ccgtatttaa caataacccc gatgccctgt gcgtctcggg gctgacggcg ggcgcccgca
     3781 cggatagcgc catactgaag cgggtaaaag ataccgttcc cgacacggtc gtgctggcga
     3841 ataccggggt gtgtctggaa aacgtcgagg agcagctctg cattgccgac ggatgcgtaa
     3901 cggcaaccac gtttaaaaaa gacggcgtct tcgccaactt tgtcgaccag gcgcgcgtgg
     3961 cgaagtttat ggagaaagta cgccatatcc gacaataaaa tggggataag caaaacgctt
     4021 atcccctgca gagagcgata actcttctgc cgatctccgt cgccttcgcc aaaagacacg
     4081 ccggggatcg gtttcagagt aacccgaacc ggcaaggagt caacgatcga tgattaatga
     4141 tgttaagtgg gttcaggcgc aacgccatgc cagcgactgg cgacacgcgc tggatatcgc
     4201 cgttcgtccg ctgattacct tcggcgcggc ggccccctgc tacctggacg gtattattga
     4261 gaacaccctt aaatgggggc catattatct tatcgcgccg gggattgcgc tgccccatgc
     4321 cagaccagag caaggcgcca accataatca aatcagcgtc actacgctat caacgccggt
     4381 cgctttcggc aatgcggatt gcgatcccat ctggctgttg ctttgcgcca gcgccacgga
     4441 tgccgaagca catattcgca ccattcaacg catcagccag tggctcgact cgccggaaag
     4501 cgtcgcgatg ttgcaagatg cgccaaatga tgccgcgctt ttcgcgcaat taaccgcatt
     4561 gcgctgatga aggttccgat gatcctgcac ccttcactgg cctccgccga tccgctgcgc
     4621 tatgccgagg cgttgaccgc tttacacgat gcgcctctcg gctcgctgca tctggatatc
     4681 gaagatacca gtttcatcaa caatattacc ttcggtatga aaaccattca ggcggtcgcg
     4741 caatactctc gccatccgct ctcatttcac ctgatggttt catcaccgca acgctggtta
     4801 ccctggcttg cagctatccg ccccggctgg attttcattc atgccgaaag cgtgcaaaac
     4861 ccctcggaga ttctggcgga tattcgcgct atcggggcga aagcaggact ggcgcttaac
     4921 ccggcaacac cgctattgcc ttatcgttat ctggcattgc aactggatgc gctgatgatc
     4981 atgaccagcg aacccgacgg gcgcgggcaa caatttattg ccgcgatgtg tgaaaaagtg
     5041 agccagagca gagagcattt ccctgctgcg gaatgctggg cggacggcgg tattacactt
     5101 cgcgccgcac ggctgcttgc cgccgcaggc gcccagcatc tggtgattgg ccgggcgttg
     5161 ttcacgacgg cgaactatga tgtgacattg tcacaattca ccgcgctata aaggagtcat
     5221 atgctgatga gccaacagcg ccccgaccgt atcaaacaga tgttgcatta cctttggcaa
     5281 cacaggcacc tctcaacaca acaagctatt gagctttttg gctatgcaga ggcaaccgtg
     5341 cgccgggatt ttcactatat cgccagccgt tatcccggta tggttcgcgg ccatggttgt
     5401 attgactttg acgacagtac ggaagataaa gaatatgttt tcgacgttaa gcggacgtta
     5461 caaagcgagg cgaaacgcga aattgccgcc ctcgcccgca cgttcatcaa ggatggagac
     5521 tgcttttttc tcgactctgg ctccacctgt ctggaactgg caaaatgtct ggtcgacgcc
     5581 aaagtaaaag tcatttgcaa tgacatcaaa atcgctaacg aactgggtgg cttcccacac
     5641 gtagagagct acattattgg cggactgatt cgccccggct acttttcggt gggcgagagt
     5701 ctggcgctgg agatgattaa cgcctttgcc gttgaacgcg cctttatctc ttgcgatgcg
     5761 ctgtcgattg aaacgggcat caccaacgct accatgtttg aagtaggcgt caaaacgcgc
     5821 attattcagc gctcacgcga ggtcatattg atggccgatc attcaaagtt tgatactgta
     5881 gaaccccatg cggtggcgac gctgtcctgt attactacca ttcttagcga cagtgcgctc
     5941 ccgtctgcta tcgcccgacg ttatcagcag gcgggatgcc gtctcatcat gtcagacccc
     6001 tcatcaggag cgcgttaatg gacatcaggc aaatgaacaa aacccatctg gagcactggc
     6061 gcggattgcg aaaacagctc tggcctggtc acccggatga cgcccatctg gcggacggcg
     6121 aagaaattct gcaagccgaa catctggcat catttattgc gatggcagac ggggtggcga
     6181 ttggctttgc ggatgcctca atccgccacg attatgtcaa tggctgtgac agttcgcccg
     6241 tggttttcct tgaaggtatt tttgttctcc cctcgttccg tcaacgcggc ttagcgaaac
     6301 aattgatagc agcagtgcaa cgatggggaa cgaataaagg gtgtcgggaa atggcttccg
     6361 atacctcgcc ggaaaataca atttcacaga aagttcacct ggcgttagga tttgaggaaa
     6421 cagagcgcgt cattttctac cgaaagcgtt gtcgaggaaa atcacacagg aaaaggtcgg
     6481 gtataatacc cgacctctat attactgtat tactgtggca gatctttttc agttaacaag
     6541 cgtgtcgttt tcacttgttc aatattcctg gcgccaccca acatcatgtt aattgtcagc
     6601 tctttgttta gctgttcaat cactgatgcc acaccctgag cgccgccaag attaagaccg
     6661 tataatacag gtcggccaac cgccacaata tccgccccgc tggctaacgc cttgaatacg
     6721 tgcgaaccac ggcgtactcc actgtcaaaa ataacaggca ctcgcttgtt gacgactttt
     6781 gcaatcgcag gaagcatatc gaatgaggac ggcccgctgt ctaattgacg gccaccatga
     6841 ttagaaaccc atattcctgc ggccccagcc tggatagcaa tttcagcatc ctccggcgac
     6901 tgaatgcctt ttacaataac cggcagaccg gaaatacgat gtacataggc aatatcctcc
     6961 ggcgtaaagg cttgtttagc ctgcgcgtaa atttcactta tccctgcccc tttgccggtt
     7021 tttgaaccat cgtcattttt cctggcgaac atttccaggt ttgcaaaact cagcgggaac
     7081 tggaagttat ttttaatatc ttcttcccga taaccgccga caggtgaatc tacggtcaga
     7141 ataatcgctt tagcgccatg ttttaccgct tgtgcaagaa taaattcgtt aaattgatta
     7201 ttcttactca tataaagctg gaagaagaac gggtttt
//
LOCUS       DAGWFR010000448         1925 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.guided.351, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000448 DAGWFR010000000
VERSION     DAGWFR010000448.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1925)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1925)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1925
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.guided.351"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            complement(<1..603)
                     /gene="intI1"
                     /locus_tag="MOX77_004956"
     CDS             complement(<1..603)
                     /gene="intI1"
                     /locus_tag="MOX77_004956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 integron integrase IntI1"
                     /protein_id="HCA3360303.1"
                     /translation="MKTATAPLPPLRSVKVLDQLRERIRYLHYSLRTEQAYVHWVRAF
                     IRFHGVRHPATLGSSEVEAFLSWLANERKVSVSTHRQALAALLFFYGKVLCTDLPWLQ
                     EIGRPRPSRRLPVVLTPDEVVRILGFLEGEHRLFAQLLYGTGMRISEGLQLRVKDLDF
                     DHGTIIVREGKGSKDRALMLPESLAPSLREQLSRARAWWLK"
     gene            761..1234
                     /locus_tag="MOX77_004957"
     CDS             761..1234
                     /locus_tag="MOX77_004957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001389366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimethoprim-resistant dihydrofolate reductase
                     DfrA7"
                     /protein_id="HCA3360304.1"
                     /translation="MKISLISATSENGVIGNGPDIPWSAKGEQLLFKALTYNQWLLVG
                     RKTFDSMGVLPNRKYAVVSRKGISSSNENVLVFPSIEIALQELSKITDHLYVSGGGQI
                     YNSLIEKADIIHLSTVHVEVEGDINFPKIPENFNLVFEQFFLSNINYTYQIWKKG"
     gene            1464..1811
                     /locus_tag="MOX77_004958"
     CDS             1464..1811
                     /locus_tag="MOX77_004958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000679427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quaternary ammonium compound efflux SMR
                     transporter QacE delta 1"
                     /protein_id="HCA3360305.1"
                     /translation="MKGWLFLVIAIVGEVIATSALKSSEGFTKLAPSAVVIIGYGIAF
                     YFLSLVLKSIPVGVAYAVWSGLGVVIITAIAWLLHGQKLDAWGFVGMGLIIAAFLLAR
                     SPSWKSLRRPTPW"
     gene            1805..>1925
                     /locus_tag="MOX77_004959"
     CDS             1805..>1925
                     /locus_tag="MOX77_004959"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001747810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HCA3360306.1"
                     /translation="MVTVFGILNLTEDSFFDESRRLDPAGAVTAAIEMLRVGSD"
BASE COUNT          477 a          474 c          474 g          500 t
ORIGIN      
        1 cttcagccac catgcccgtg cacgcgacag ctgctcgcgc aggctgggtg ccaagctctc
       61 gggtaacatc aaggcccgat ccttggagcc cttgccctcc cgcacgatga tcgtgccgtg
      121 atcgaaatcc agatccttga cccgcagttg caaaccctca ctgatccgca tgcccgttcc
      181 atacagaagc tgggcgaaca aacgatgctc gccttccaga aaaccgagga tgcgaaccac
      241 ttcatccggg gtcagcacca ccggcaagcg ccgcgacggc cgaggtcttc cgatctcctg
      301 aagccagggc agatccgtgc acagcacctt gccgtagaag aacagcaagg ccgccaatgc
      361 ctgacgatgc gtggagaccg aaaccttgcg ctcgttcgcc agccaggaca gaaatgcctc
      421 gacttcgctg ctgcccaagg ttgccgggtg acgcacaccg tggaaacgga tgaaggcacg
      481 aacccagtgg acataagcct gttcggttcg taagctgtaa tgcaagtagc gtatgcgctc
      541 acgcaactgg tccagaacct tgaccgaacg cagcggtggt aacggcgcag tggcggtttt
      601 catggcttgt tatgactgtt tttttgtaca gtctatgcct cgggcatcca agcagcaagc
      661 gcgttacgcc gtgggtcgat gtttgatgtt atggagcagc aacgatgtta cgcagcaggg
      721 cagtcgccct aaaacaaagt tagccattac gggggttgaa ttgaaaattt cattgatttc
      781 tgcaacgtca gaaaatggcg taatcggtaa tggccctgat atcccatggt cagcaaaagg
      841 tgagcagtta ctctttaaag cgctcacata taatcagtgg ctccttgttg gaaggaaaac
      901 atttgactct atgggtgttc ttccaaatcg aaaatatgca gtagtgtcga ggaaaggaat
      961 ttcaagctca aatgaaaatg tattagtctt tccttcaata gaaatcgctt tgcaagaact
     1021 atcgaaaatt acagatcatt tatatgtctc tggtggcggt caaatctaca atagtcttat
     1081 tgaaaaagca gatataattc atttgtctac tgttcacgtt gaggttgaag gtgatatcaa
     1141 ttttcctaaa attccagaga atttcaattt ggtttttgag cagttttttt tgtctaatat
     1201 aaattacaca tatcagattt ggaaaaaagg ctaacaagtc gttccagcac cagtcgctgc
     1261 gctccttgga cagtttttaa gtcgcggttt tatggttttg ctgcgcaaaa gtattccata
     1321 aaaccacaac ttaaaaactg ccgctgaact cggcgttaga tgcactaagc acataattgc
     1381 tcacagccaa actatcaggt caagtctgct tttattattt ttaagcgtgc ataataagcc
     1441 ctacacaaat tgggagatat atcatgaaag gctggctttt tcttgttatc gcaatagttg
     1501 gcgaagtaat cgcaacatcc gcattaaaat ctagcgaggg ctttactaag cttgcccctt
     1561 ccgccgttgt cataatcggt tatggcatcg cattttattt tctttctctg gttctgaaat
     1621 ccatccctgt cggtgttgct tatgcagtct ggtcgggact cggcgtcgtc ataattacag
     1681 ccattgcctg gttgcttcat gggcaaaagc ttgatgcgtg gggctttgta ggtatggggc
     1741 tcataattgc tgcctttttg ctcgcccgat ccccatcgtg gaagtcgctg cggaggccga
     1801 cgccatggtg acggtgttcg gcattctgaa tctcaccgag gactccttct tcgatgagag
     1861 ccggcggcta gaccccgccg gcgctgtcac cgcggcgatc gaaatgctgc gagtcggatc
     1921 agacg
//
LOCUS       DAGWFR010000449         1903 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.guided.353, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000449 DAGWFR010000000
VERSION     DAGWFR010000449.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1903)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1903)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1903
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.guided.353"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            <1..290
                     /locus_tag="MOX77_004960"
     CDS             <1..290
                     /locus_tag="MOX77_004960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HCA3360307.1"
                     /translation="KFITTDYLQQCHMGQMVVTILSAVAQAERRRILERTNEGRQEAK
                     LKGIKFGRRRTVDRNVVLTLHQKGTGATEIAHQLSIARSTVYKILEDERAS"
     gene            473..1333
                     /locus_tag="MOX77_004961"
     CDS             473..1333
                     /locus_tag="MOX77_004961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032489893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class A broad-spectrum beta-lactamase TEM-1"
                     /protein_id="HCA3360308.1"
                     /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGY
                     IELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVE
                     YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRL
                     DRWEPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPL
                     LRSALPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIA
                     EIGASLIKHW"
     gene            1480..1761
                     /locus_tag="MOX77_004962"
                     /pseudo
     CDS             1480..1761
                     /locus_tag="MOX77_004962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001120888.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase zinc-binding domain-containing
                     protein"
BASE COUNT          481 a          423 c          501 g          498 t
ORIGIN      
        1 ataagtttat caccaccgac tatttgcaac agtgccatat ggggcaaatg gtggtcacca
       61 tcctgtcggc tgtggcacag gctgaacgcc ggaggatcct agaacgcacg aatgagggcc
      121 gacaggaagc aaagctgaaa ggaatcaaat ttggccgcag gcgtaccgtg gacaggaacg
      181 tcgtgctgac gcttcatcag aagggcactg gtgcaacgga aattgctcat cagctcagta
      241 ttgcccgctc cacggtttat aaaattcttg aagacgaaag ggcctcgtga tacgcctatt
      301 tttataggtt aatgtcatga taataatggt ttcttagacg tcaggtggca cttttcgggg
      361 aaatgtgcgc ggaaccccta tttgtttatt tttctaaata cattcaaata tgtatccgct
      421 catgagacaa taaccctggt aaatgcttca ataatattga aaaaggaaga gtatgagtat
      481 tcaacatttt cgtgtcgccc ttattccctt ttttgcggca ttttgccttc ctgtttttgc
      541 tcacccagaa acgctggtga aagtaaaaga tgctgaagat cagttgggtg cacgagtggg
      601 ttacatcgaa ctggatctca acagcggtaa gatccttgag agttttcgcc ccgaagaacg
      661 ttttccaatg atgagcactt ttaaagttct gctatgtggt gcggtattat cccgtgttga
      721 cgccgggcaa gagcaactcg gtcgccgcat acactattct cagaatgact tggttgagta
      781 ctcaccagtc acagaaaagc atcttacgga tggcatgaca gtaagagaat tatgcagtgc
      841 tgccataacc atgagtgata acactgctgc caacttactt ctgacaacga tcggaggacc
      901 gaaggagcta accgcttttt tgcacaacat gggggatcat gtaactcgcc ttgatcgttg
      961 ggaaccggag ctgaatgaag ccataccaaa cgacgagcgt gacaccacga tgcctgcagc
     1021 aatggcaaca acgttgcgca aactattaac tggcgaacta cttactctag cttcccggca
     1081 acaattaata gactggatgg aggcggataa agttgcagga ccacttctgc gctcggccct
     1141 tccggctggc tggtttattg ctgataaatc tggagccggt gagcgtgggt ctcgcggtat
     1201 cattgcagca ctggggccag atggtaagcc ctcccgtatc gtagttatct acacgacggg
     1261 gagtcaggca actatggatg aacgaaatag acagatcgct gagataggtg cctcactgat
     1321 taagcattgg taactgtcag accaagttta ctcatatata ctttagattg atttaaaact
     1381 tcatttttaa tttaaaagga tctaggtgaa gatccttttt gataatctca tgaccaaaat
     1441 cccttaacgt gagttttcgt tccactgagc gtcagacccc ttatggcaga gcagggaaag
     1501 gaattgccgg gctatgtgca acgggaattt gaagaatttc tccaatgcgg gcggctggag
     1561 catggctttc tacgggttcg ctgcgagtct tgccacgccg agcacctggt cgctttcagc
     1621 tgtaagcgtc gcggtttctg cccgagctgt ggggcgcggc ggatggccga aagtgccgcc
     1681 ttgctggttg atgaagtact gcctgaacaa cccatgcgtc agtgggtgtt gagcttcccg
     1741 tttcagctgc gtttcctgtt tggggtcgtt tgcgggaagg ggcggaatcc tacgctaagg
     1801 ctttggccag cgatattctc cggtgagatt gatgtgttcc caggggatag gagaagtcgc
     1861 ttgatatggc actgttgcaa atagtcggtg gtgataaact tat
//
LOCUS       DAGWFR010000450         1869 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.guided.355, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000450 DAGWFR010000000
VERSION     DAGWFR010000450.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1869)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1869)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1869
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.guided.355"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            264..923
                     /locus_tag="MOX77_004963"
     CDS             264..923
                     /locus_tag="MOX77_004963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011152976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type A-1 chloramphenicol O-acetyltransferase"
                     /protein_id="HCA3360309.1"
                     /translation="MEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAF
                     LKTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETF
                     SSLWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNV
                     ANMDNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGG
                     A"
     gene            complement(1124..1501)
                     /locus_tag="MOX77_004964"
     CDS             complement(1124..1501)
                     /locus_tag="MOX77_004964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000656306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HCA3360310.1"
                     /translation="MKDYLCKKLFNRLSGTLVIRARCGNNITGLACCNILYPSPRYSG
                     QLHIKELYVSQCDRNKGTGKAIMRFIARLALEQECLSLSWNAEKSNPGANRFYQALGG
                     RINDHIVNYYLHGESLSKLASGI"
     gene            complement(1568..>1869)
                     /locus_tag="MOX77_004965"
     CDS             complement(1568..>1869)
                     /locus_tag="MOX77_004965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001138064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Tn3 family transposase"
                     /protein_id="HCA3360311.1"
                     /translation="RAVFFNRLGEIRDRSFEQQRYRASGLNLVTAAIVLWNTVYLERA
                     AHALRGNGHAVDDSLLQYLSPLGWEHINLTGDYLWRSSAKIGAGKFRPLRPLQPA"
BASE COUNT          482 a          446 c          464 g          477 t
ORIGIN      
        1 acaccatcat acactaaatc agtaagttgg cagcatcacc cgacgcactt tgcgccgaat
       61 aaatacctgt gacggaagat cacttcgcag aataaataaa tcctggtgtc cctgttgata
      121 ccgggaagcc ctgggccaac ttttggcgaa aatgagacgt tgatcggcac gtaagaggtt
      181 ccaactttca ccataatgaa ataagatcac taccgggcgt attttttgag ttatcgagat
      241 tttcaggagc taaggaagct aaaatggaga aaaaaatcac tggatatacc accgttgata
      301 tatcccaatg gcatcgtaaa gaacattttg aggcatttca gtcagttgct caatgtacct
      361 ataaccagac cgttcagctg gatattacgg cctttttaaa gaccgtaaag aaaaataagc
      421 acaagtttta tccggccttt attcacattc ttgcccgcct gatgaatgct catccggaat
      481 tccgtatggc aatgaaagac ggtgagctgg tgatatggga tagtgttcac ccttgttaca
      541 ccgttttcca tgagcaaact gaaacgtttt catcgctctg gagtgaatac cacgacgatt
      601 tccggcagtt tctacacata tattcgcaag atgtggcgtg ttacggtgaa aacctggcct
      661 atttccctaa agggtttatt gagaatatgt ttttcgtctc agccaatccc tgggtgagtt
      721 tcaccagttt tgatttaaac gtggccaata tggacaactt cttcgccccc gttttcacca
      781 tgggcaaata ttatacgcaa ggcgacaagg tgctgatgcc gctggcgatt caggttcatc
      841 atgccgtttg tgatggcttc catgtcggca gaatgcttaa tgaattacaa cagtactgcg
      901 atgagtggca gggcggggcg taattttttt aaggcagtta ttggtgccct taaacgcctg
      961 gttgctacgc ctgaataagt gataataagc ggatgaatgg cagaaattcg aaagcaaatt
     1021 cgacccggtc gtcggttcag ggcagggtcg ttaaatagcc gcttatgtct attgctggtt
     1081 taccggttta ttgactaccg gaagcagtgt gaccgtgtgc ttctcaaatg cctgaggcca
     1141 gtttgctcag gctctccccg tggaggtaat aattgacgat atgatcattt attctgcctc
     1201 ccagagcctg ataaaaacgg ttagcgccgg ggttggattt ttcagcgttc cagctaaggc
     1261 taaggcattc ctgttcaagc gcaagccggg ctataaagcg cattatcgct ttacccgtgc
     1321 ccttatttcg atcgcactga gaaacataca gctctttaat atgcagctga ccgctgtatc
     1381 ggggcgaggg ataaagaata ttgcaacatg ccaggccagt aatgttattg ccgcagcgcg
     1441 ctctgatcac cagggtaccg gaaagccggt tgaataactt tttacagaga taatccttca
     1501 tcaacgcttc ctgaatgata ccttcgccat aataggggtc gtctcagaaa acggaaaata
     1561 aagcacgcta agccggttgc agaggccgta gcggcctgaa cttccccgcg ccgatcttgg
     1621 cgctgctgcg ccataggtaa tcaccggtca ggttgatgtg ctcccagccg agtggcgaca
     1681 ggtactgcaa tagcgagtca tcgacggcat gaccattgcc gcgcaacgca tgcgccgcac
     1741 gctccaggta gaccgtgttc cacagcacga tggccgccgt caccaggttg aggccgctgg
     1801 cccggtagcg ctgctgctcg aaactgcggt cacggatttc accaaggcgg ttgaagaaca
     1861 cggcacggg
//
LOCUS       DAGWFR010000451         1734 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.guided.364, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000451 DAGWFR010000000
VERSION     DAGWFR010000451.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1734)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1734)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1734
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.guided.364"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            47..850
                     /locus_tag="MOX77_004966"
                     /note="aph(3'')-Ib"
     CDS             47..850
                     /locus_tag="MOX77_004966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010890156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase APH(3'')-Ib"
                     /protein_id="HCA3360312.1"
                     /translation="MNRTNIFLGESHSDWLPVRGGESGDFVFRRGDGHAFAKIAPASR
                     RGELAGERDRLIWLKGRGVACPEVINWQEEQEGACLVITAIPGVPAADLSGADLLKAW
                     PSMGQQLGAVHSLSVDQCPFERRLSRMFGRAVDVVSRNAVNPDFLPDEDKSTPQLDLL
                     ARVERELPVRLDQERTDMVVCHGDPCMPNFMVDPKTLQCTGLIDLGRLGTADRYADLA
                     LMIANAEENWAAPDEAERAFAVLFNVLGIEAPDRERLAFYLRLDPLTWG"
     gene            850..1686
                     /locus_tag="MOX77_004967"
     CDS             850..1686
                     /locus_tag="MOX77_004967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000480972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase APH(6)-Id"
                     /protein_id="HCA3360313.1"
                     /translation="MFMPPVFPAHWHVSQPVLIADTFSSLVWKVSLPDGTPAIVKGLK
                     PIEDIADELRGADYLVWRNGRGAVRLLGRENNLMLLEYAGERMLSHIVAEHGDYQATE
                     IAAELMAKLYAASEEPLPSALLPIRDRFAALFQRARDDQNAGCQTDYVHAAIIADQMM
                     SNASELRGLHGDLHHENIMFSSRGWLVIDPVGLVGEVGFGAANMFYDPADRDDLCLDP
                     RRIAQMADAFSRALDVDPRRLLDQAYAYGCLSAAWNADGEEEQRDLAIAAAIKQVRQT
                     SY"
BASE COUNT          355 a          455 c          506 g          418 t
ORIGIN      
        1 tatttctcta tattcgcgct tcatcagaaa actgaaggaa cctccattga atcgaactaa
       61 tatttttttg ggtgaatcgc attctgactg gttgcctgtc agaggcggag aatctggtga
      121 ttttgttttt cgacgtggtg acgggcatgc cttcgcgaaa atcgcacctg cttcccgccg
      181 cggtgagctc gctggagagc gtgaccgcct catttggctc aaaggtcgag gtgtggcttg
      241 ccccgaggtc atcaactggc aggaggaaca ggagggtgca tgcttggtga taacggcaat
      301 tccgggagta ccggcggctg atctgtctgg agcggatttg ctcaaagcgt ggccgtcaat
      361 ggggcagcaa cttggcgctg ttcacagcct atcggttgat caatgtccgt ttgagcgcag
      421 gctgtcgcga atgttcggac gcgccgttga tgtggtgtcc cgcaatgccg tcaatcccga
      481 cttcttaccg gacgaggaca agagtacgcc gcagctcgat cttttggctc gtgtcgaacg
      541 agagctaccg gtgcggctcg accaagagcg caccgatatg gttgtttgcc atggtgatcc
      601 ctgcatgccg aacttcatgg tggaccctaa aactcttcaa tgcacgggtc tgatcgacct
      661 tgggcggctc ggaacagcag atcgctatgc cgatttggca ctcatgattg ctaacgccga
      721 agagaactgg gcagcgccag atgaagcaga gcgcgccttc gctgtcctat tcaatgtatt
      781 ggggatcgaa gcccccgacc gcgaacgcct tgccttctat ctgcgattgg accctctgac
      841 ttggggttga tgttcatgcc gcctgttttt cctgctcatt ggcacgtttc gcaacctgtt
      901 ctcattgcgg acaccttttc cagcctcgtt tggaaagttt cattgccaga cgggactcct
      961 gcaatcgtca agggattgaa acctatagaa gacattgctg atgaactgcg cggggccgac
     1021 tatctggtat ggcgcaatgg gaggggagca gtccggttgc tcggtcgtga gaacaatctg
     1081 atgttgctcg aatatgccgg ggagcgaatg ctctctcaca tcgttgccga gcacggcgac
     1141 taccaggcga ccgaaattgc agcggaacta atggcgaagc tgtatgccgc atctgaggaa
     1201 cccctgcctt ctgcccttct cccgatccgg gatcgctttg cagctttgtt tcagcgggcg
     1261 cgcgatgatc aaaacgcagg ttgtcaaact gactacgtcc acgcggcgat tatagccgat
     1321 caaatgatga gcaatgcctc ggaactgcgt gggctacatg gcgatctgca tcatgaaaac
     1381 atcatgttct ccagtcgcgg ctggctggtg atagatcccg tcggtctggt cggtgaagtg
     1441 ggctttggcg ccgccaatat gttctacgat ccggctgaca gagacgacct ttgtctcgat
     1501 cctagacgca ttgcacagat ggcggacgca ttctctcgtg cgctggacgt cgatccgcgt
     1561 cgcctgctcg accaggcgta cgcttatggg tgcctttccg cagcttggaa cgcggatgga
     1621 gaagaggagc aacgcgatct agctatcgcg gccgcgatca agcaggtgcg acagacgtca
     1681 tactagatat caagggcact gttgcaaagt tagcgatgag gcagcctttt gtct
//
LOCUS       DAGWFR010000452         1001 bp    DNA     linear   BCT 16-MAR-2022
DEFINITION  TPA_asm: Salmonella enterica subsp. enterica serovar Typhi strain
            2018118839 SAMN20456392-rid14056843.guided.413, whole genome
            shotgun sequence.
ACCESSION   DAGWFR010000452 DAGWFR010000000
VERSION     DAGWFR010000452.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN20456392
            Sequence Read Archive: SRR15369302
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Salmonella enterica subsp. enterica serovar Typhi (Salmonella
            typhi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhi
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1001)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1001)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-MAR-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001262644.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001262644.1
            Genome Coverage       :: 81x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/16/2022 10:47:34
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 136 of 267
            Pseudo Genes (incomplete)         :: 80 of 267
            Pseudo Genes (internal stop)      :: 94 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1001
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhi"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN20456392-rid14056843.guided.413"
                     /strain="2018118839"
                     /serovar="Typhi"
                     /isolation_source="Kibera"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90370"
                     /country="Kenya"
                     /collection_date="2019-03-18"
                     /collected_by="KEMRI,CDC"
     gene            339..>1001
                     /gene="folP"
                     /locus_tag="MOX77_004968"
     CDS             339..>1001
                     /gene="folP"
                     /locus_tag="MOX77_004968"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001043260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HCA3360314.1"
                     /translation="MNKSLIIFGIVNITSDSFSDGGRYLAPDAAIAQARKLMAEGADV
                     IDLGPASSNPDAAPVSSDTEIERIAPVLDALKADGIPVSLDSYQPATQAYALSRGVAY
                     LNDIRGFPDAAFYPQLAKSSAKLVVMHSVQDGQADRREAPAGDIMDHIAAFFDARIAA
                     LTGAGIKRNRLVLDPGMGFFLGAAPETSLSVLARFDELRLRFDLPVLLSVSRKSFLRA
                     LTG"
BASE COUNT          202 a          295 c          255 g          249 t
ORIGIN      
        1 cgacatcacc cggcccaagg cggcaggctg acccccccca ctctattgta aacaagacat
       61 ttttatcttt tatattcaat ggcttatttt cctgctaatt ggtaatacca tgaaaaatac
      121 catgctcaga aaaggcttaa caatattttg aaaaattgcc tactgagcgc tgccgcacag
      181 ctccataggc cgctttcctg gctttgcttc cagatgtatg ctattctgct cctgcagcta
      241 atggatcacc gcaaacaggt tactcgcctg gggattccct ttcgacccga gcatccgtat
      301 gagactcatg ctcgattatt attattatag aagcccccat gaataaatcg ctcatcattt
      361 tcggcatcgt caacataacc tcggacagtt tctccgatgg aggccggtat ctggcgccag
      421 acgcagccat tgcgcaggcg cgtaagctga tggccgaggg ggcagatgtg atcgacctcg
      481 gtccggcatc cagcaacccc gacgccgcgc ctgtttcgtc cgacacagaa atcgagcgta
      541 tcgcgccggt gctggacgcg ctcaaggcag atggcattcc cgtctcgctc gacagttatc
      601 aacccgcgac gcaagcctat gccttgtcgc gtggtgtggc ctatctcaat gatattcgcg
      661 gttttccaga cgctgcgttc tatccgcaat tggcgaaatc atctgccaaa ctcgtcgtta
      721 tgcattcggt gcaagacggg caggcagatc ggcgcgaggc acccgctggc gacatcatgg
      781 atcacattgc ggcgttcttt gacgcgcgca tcgcggcgct gacgggtgcc ggtatcaaac
      841 gcaaccgcct tgtccttgat cccggcatgg ggttttttct gggggctgct cccgaaacct
      901 cgctctcggt gctggcgcgg ttcgatgaat tgcggctgcg cttcgatttg ccggtgcttc
      961 tgtctgtttc gcgcaaatcc tttctgcgcg cgctcacagg c
//
